Your job contains 1 sequence.
>005502
MENFPFHDGSIYDMLDTRHTDTRPDVNHSLQMHSSLVRRLSQERELEGHQGCVNAISWNS
KGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPETSDELVVSGAGDAEVR
LFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVEVGNPHVVWSASEDGTLRQHDFRQG
SSCPPAGSSHQECRNILLDLRCGAKRSLADPPKQTLSLKSCDISSTRPHLLLVGGSDAFA
RLYDRRMLPPLTSCQKRMSPPPCVNYFCPMHLSEHGRSSLHLTHVTFSPNGEEVLLSYSG
EHVYLMDVNHAGGRAMRYTVGDASKIMSFTPTLNGLELQPPIHDFLQTNIRVRGEVATGL
GKCRMLVEIARNSLEEGKHPYYGIEACNEVLEGHLSGIGPMLRHECLCIRAALLLKRKWK
NDAQMAIRDCYNARRIDSSSFRAHLYMSEALEQLCKYKEALDFAIAAQCLDPSNSVMAEK
VENIKKHIAAAETEKNNKANDGGARSEPRTGRVLSLSDIIYRSEANSDASQDGPRSERED
SDYDEEVEVDFHTSVPGDEGRDVEANFLHGSLNVRIHRRGDSARETVDANGSSGSPSSSS
QNDRIPYQPETVIDMKQRYVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGR
LIKMLLGDEAGNVISSMEECGLLLYFSILILSN
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 005502
(693 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2183735 - symbol:ASG2 "AT5G10940" species:3702... 2316 2.8e-240 1
UNIPROTKB|Q8N5D0 - symbol:WDTC1 "WD and tetratricopeptide... 427 6.6e-54 2
UNIPROTKB|E2RA21 - symbol:WDTC1 "Uncharacterized protein"... 427 6.9e-54 2
UNIPROTKB|B6CVL4 - symbol:WDTC1 "Uncharacterized protein"... 427 1.1e-53 2
MGI|MGI:2685541 - symbol:Wdtc1 "WD and tetratricopeptide ... 375 3.0e-53 3
RGD|1310362 - symbol:Wdtc1 "WD and tetratricopeptide repe... 372 7.1e-53 3
UNIPROTKB|E1C4X5 - symbol:WDTC1 "Uncharacterized protein"... 363 3.3e-52 3
FB|FBgn0000057 - symbol:adp "adipose" species:7227 "Droso... 297 1.9e-44 3
POMBASE|SPBC609.03 - symbol:iqw1 "WD repeat protein, Iqw1... 375 1.2e-43 2
UNIPROTKB|F1NU19 - symbol:F1NU19 "Uncharacterized protein... 271 3.7e-35 3
MGI|MGI:1921356 - symbol:Dcaf6 "DDB1 and CUL4 associated ... 265 7.4e-35 3
UNIPROTKB|Q58WW2 - symbol:DCAF6 "DDB1- and CUL4-associate... 264 1.8e-34 3
UNIPROTKB|Q5R9B8 - symbol:DCAF6 "DDB1- and CUL4-associate... 264 1.8e-34 3
UNIPROTKB|F1MBJ1 - symbol:DCAF6 "Uncharacterized protein"... 264 2.0e-34 3
UNIPROTKB|E2REY6 - symbol:DCAF6 "Uncharacterized protein"... 264 2.9e-34 3
RGD|1561961 - symbol:Dcaf6 "DDB1 and CUL4 associated fact... 263 4.1e-34 4
TAIR|locus:2121164 - symbol:AT4G38480 "AT4G38480" species... 256 4.1e-33 3
UNIPROTKB|Q5R448 - symbol:DCAF8 "DDB1- and CUL4-associate... 208 7.8e-31 3
WB|WBGene00044440 - symbol:adpr-1 species:6239 "Caenorhab... 214 2.4e-30 3
RGD|1308513 - symbol:Dcaf8 "DDB1 and CUL4 associated fact... 207 4.0e-30 3
UNIPROTKB|Q5TAQ9 - symbol:DCAF8 "DDB1- and CUL4-associate... 207 4.2e-30 3
MGI|MGI:91860 - symbol:Dcaf8 "DDB1 and CUL4 associated fa... 207 8.2e-30 3
UNIPROTKB|G3V3G9 - symbol:DCAF8 "DDB1- and CUL4-associate... 207 1.4e-29 3
DICTYBASE|DDB_G0269686 - symbol:DDB_G0269686 "WD40 repeat... 236 3.0e-29 4
ASPGD|ASPL0000058488 - symbol:AN0287 species:162425 "Emer... 228 1.3e-27 3
TAIR|locus:2132796 - symbol:AT4G35140 "AT4G35140" species... 255 3.0e-27 2
GENEDB_PFALCIPARUM|PF14_0262 - symbol:PF14_0262 "hypothet... 215 2.2e-24 3
UNIPROTKB|Q8ILI1 - symbol:PF14_0262 "Putative uncharacter... 215 2.2e-24 3
UNIPROTKB|G3N3E5 - symbol:WDR5 "WD repeat-containing prot... 162 2.0e-13 3
UNIPROTKB|Q2KIG2 - symbol:WDR5 "WD repeat-containing prot... 162 4.2e-13 3
UNIPROTKB|P61964 - symbol:WDR5 "WD repeat-containing prot... 162 4.2e-13 3
UNIPROTKB|F1S034 - symbol:WDR5 "Uncharacterized protein" ... 162 4.2e-13 3
MGI|MGI:2155884 - symbol:Wdr5 "WD repeat domain 5" specie... 162 4.2e-13 3
RGD|1305159 - symbol:Wdr5 "WD repeat domain 5" species:10... 162 4.2e-13 3
FB|FBgn0040066 - symbol:wds "will die slowly" species:722... 163 1.5e-12 3
UNIPROTKB|Q5M786 - symbol:wdr5 "WD repeat-containing prot... 162 2.2e-12 3
MGI|MGI:1916794 - symbol:Wdr5b "WD repeat domain 5B" spec... 142 1.1e-10 3
DICTYBASE|DDB_G0287273 - symbol:wdr5 "WD40 repeat-contain... 149 8.0e-10 3
WB|WBGene00006474 - symbol:wdr-5.1 species:6239 "Caenorha... 141 9.2e-10 2
UNIPROTKB|Q17963 - symbol:tag-125 "WD repeat-containing p... 141 9.2e-10 2
UNIPROTKB|A8X8C6 - symbol:tag-125 "WD repeat-containing p... 140 1.6e-09 3
ZFIN|ZDB-GENE-060929-808 - symbol:dcaf5 "ddb1 and cul4 as... 152 2.5e-09 2
UNIPROTKB|F1MFJ6 - symbol:TBL1XR1 "Uncharacterized protei... 150 7.9e-09 2
UNIPROTKB|Q9BZK7 - symbol:TBL1XR1 "F-box-like/WD repeat-c... 149 1.0e-08 2
UNIPROTKB|F1SGD0 - symbol:TBL1XR1 "Uncharacterized protei... 149 1.0e-08 2
MGI|MGI:2441730 - symbol:Tbl1xr1 "transducin (beta)-like ... 149 1.0e-08 2
RGD|1560053 - symbol:Tbl1xr1 "transducin (beta)-like 1 X-... 149 1.0e-08 2
TAIR|locus:2140215 - symbol:WDR5b "AT4G02730" species:370... 125 3.6e-08 2
UNIPROTKB|E1BV27 - symbol:TBL1X "Uncharacterized protein"... 147 3.6e-08 2
MGI|MGI:1336172 - symbol:Tbl1x "transducin (beta)-like 1 ... 147 3.7e-08 2
RGD|1563868 - symbol:Tbl1x "transducin (beta)-like 1 X-li... 147 3.7e-08 2
UNIPROTKB|B7TCI5 - symbol:TBL1X "Transducin beta-like 1" ... 147 3.7e-08 2
UNIPROTKB|O60907 - symbol:TBL1X "F-box-like/WD repeat-con... 147 3.9e-08 2
ASPGD|ASPL0000006214 - symbol:AN6385 species:162425 "Emer... 144 4.2e-08 2
TAIR|locus:2097435 - symbol:WDR5a "AT3G49660" species:370... 125 5.2e-08 3
MGI|MGI:2444785 - symbol:Dcaf5 "DDB1 and CUL4 associated ... 141 6.0e-08 2
UNIPROTKB|G3V6K4 - symbol:Dcaf5 "Protein Dcaf5" species:1... 141 6.0e-08 2
UNIPROTKB|Q96JK2 - symbol:DCAF5 "DDB1- and CUL4-associate... 141 7.5e-08 2
UNIPROTKB|E2QXZ3 - symbol:DCAF5 "Uncharacterized protein"... 141 7.6e-08 2
UNIPROTKB|Q4R8H1 - symbol:TBL1X "F-box-like/WD repeat-con... 145 7.8e-08 2
UNIPROTKB|F1NYZ8 - symbol:TBL1XR1 "Uncharacterized protei... 140 1.0e-07 2
ZFIN|ZDB-GENE-040426-1192 - symbol:tbl1xr1 "transducin (b... 146 1.4e-07 2
UNIPROTKB|Q8N136 - symbol:WDR69 "Outer row dynein assembl... 124 1.6e-07 2
UNIPROTKB|B8YE10 - symbol:TBL1Y "Transducin (Beta)-like 1... 140 2.1e-07 2
UNIPROTKB|F1S4C1 - symbol:DCAF5 "Uncharacterized protein"... 129 2.3e-07 1
UNIPROTKB|C3UJQ7 - symbol:TBL1Y "Transducin (Beta)-like 1... 138 3.5e-07 2
UNIPROTKB|Q9BQ87 - symbol:TBL1Y "F-box-like/WD repeat-con... 137 3.5e-07 2
ASPGD|ASPL0000032070 - symbol:fbx23 species:162425 "Emeri... 149 5.8e-07 2
UNIPROTKB|G8JKX8 - symbol:COPB2 "Coatomer subunit beta'" ... 151 7.0e-07 3
UNIPROTKB|Q0P593 - symbol:WDR69 "Outer row dynein assembl... 124 1.1e-06 2
RGD|1561436 - symbol:LOC363267 "hypothetical protein LOC3... 120 1.1e-06 2
UNIPROTKB|B4DZI8 - symbol:COPB2 "Coatomer protein complex... 151 1.5e-06 3
UNIPROTKB|E1BYR9 - symbol:ATG16L1 "Uncharacterized protei... 120 1.7e-06 2
MGI|MGI:1354962 - symbol:Copb2 "coatomer protein complex,... 151 1.7e-06 3
UNIPROTKB|P35606 - symbol:COPB2 "Coatomer subunit beta'" ... 151 1.7e-06 3
UNIPROTKB|P35605 - symbol:COPB2 "Coatomer subunit beta'" ... 151 1.7e-06 3
UNIPROTKB|E2R667 - symbol:COPB2 "Uncharacterized protein"... 151 1.7e-06 3
UNIPROTKB|F1SL54 - symbol:COPB2 "Uncharacterized protein"... 151 1.7e-06 3
UNIPROTKB|E1C016 - symbol:COPB2 "Uncharacterized protein"... 151 1.8e-06 3
ZFIN|ZDB-GENE-050417-401 - symbol:atg16l1 "ATG16 autophag... 118 2.2e-06 2
TAIR|locus:2158232 - symbol:HOS15 "high expression of osm... 125 2.6e-06 2
ZFIN|ZDB-GENE-010724-7 - symbol:copb2 "coatomer protein c... 149 3.2e-06 3
UNIPROTKB|F1NUJ8 - symbol:POC1A "Uncharacterized protein"... 119 3.3e-06 3
UNIPROTKB|P93397 - symbol:P93397 "Guanine nucleotide-bind... 95 3.6e-06 3
UNIPROTKB|Q676U5 - symbol:ATG16L1 "Autophagy-related prot... 117 4.5e-06 2
WB|WBGene00004767 - symbol:sel-10 species:6239 "Caenorhab... 128 4.6e-06 2
UNIPROTKB|Q93794 - symbol:sel-10 "F-box/WD repeat-contain... 128 4.6e-06 2
RGD|1310631 - symbol:Atg16l1 "autophagy related 16-like 1... 113 5.9e-06 2
DICTYBASE|DDB_G0288375 - symbol:lis1 "lissencephaly-1 hom... 113 6.8e-06 2
RGD|628746 - symbol:Copb2 "coatomer protein complex, subu... 145 7.4e-06 3
MGI|MGI:1915086 - symbol:Wdr83 "WD repeat domain containi... 106 7.8e-06 2
TAIR|locus:2161840 - symbol:TEX1 "AT5G56130" species:3702... 118 7.9e-06 3
FB|FBgn0263933 - symbol:ebi "ebi" species:7227 "Drosophil... 127 9.3e-06 2
RGD|1306947 - symbol:Wdr83 "WD repeat domain 83" species:... 106 9.9e-06 2
UNIPROTKB|E2R5F8 - symbol:ATG16L1 "Uncharacterized protei... 117 1.2e-05 2
MGI|MGI:1924290 - symbol:Atg16l1 "autophagy related 16-li... 114 1.2e-05 2
DICTYBASE|DDB_G0278285 - symbol:copB2 "coatomer protein c... 140 1.2e-05 1
UNIPROTKB|E1BGS8 - symbol:ATG16L1 "Uncharacterized protei... 117 1.2e-05 2
UNIPROTKB|Q40687 - symbol:LOC_Os03g46650 "Guanine nucleot... 104 1.5e-05 3
UNIPROTKB|F1SM42 - symbol:ATG16L1 "Uncharacterized protei... 117 1.8e-05 2
WARNING: Descriptions of 137 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2183735 [details] [associations]
symbol:ASG2 "AT5G10940" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0009506 "plasmodesma" evidence=IDA] [GO:0000956
"nuclear-transcribed mRNA catabolic process" evidence=RCA]
[GO:0006346 "methylation-dependent chromatin silencing"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0009630 "gravitropism" evidence=RCA] [GO:0010413
"glucuronoxylan metabolic process" evidence=RCA] [GO:0016246 "RNA
interference" evidence=RCA] [GO:0031048 "chromatin silencing by
small RNA" evidence=RCA] [GO:0045132 "meiotic chromosome
segregation" evidence=RCA] [GO:0045492 "xylan biosynthetic process"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR011990 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005886 GO:GO:0009506
EMBL:CP002688 GenomeReviews:BA000015_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 Gene3D:1.25.40.10 GO:GO:0080008 KO:K11807
OMA:HRYCGHC eggNOG:NOG288984 EMBL:AY039964 EMBL:AY150424
IPI:IPI00539536 RefSeq:NP_568242.1 UniGene:At.22156
ProteinModelPortal:Q94BQ3 SMR:Q94BQ3 IntAct:Q94BQ3 PaxDb:Q94BQ3
PRIDE:Q94BQ3 EnsemblPlants:AT5G10940.1 GeneID:830961
KEGG:ath:AT5G10940 TAIR:At5g10940 HOGENOM:HOG000239804
InParanoid:Q94BQ3 PhylomeDB:Q94BQ3 ProtClustDB:CLSN2689594
ArrayExpress:Q94BQ3 Genevestigator:Q94BQ3 Uniprot:Q94BQ3
Length = 757
Score = 2316 (820.3 bits), Expect = 2.8e-240, P = 2.8e-240
Identities = 453/674 (67%), Positives = 520/674 (77%)
Query: 1 MENFPFHDGSIYDMLDTRHTDTRPDVNHSLQMHSSLVRRLSQERELEGHQGCVNAISWNS 60
M+N FHDG+I+++L TR D +V+ +Q HSSLVRRLSQE+ELEGHQGCVNA++WNS
Sbjct: 1 MDNLSFHDGNIFNLLHTRSQDPSHEVDQRMQFHSSLVRRLSQEQELEGHQGCVNALAWNS 60
Query: 61 KGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPETSDELVVSGAGDAEVR 120
GSLLISGSDD IN+W+YSSRKLLHSI+TGH+AN+FCTKFVPETSDELVVSGAGDAEVR
Sbjct: 61 NGSLLISGSDDLRINIWNYSSRKLLHSIDTGHTANIFCTKFVPETSDELVVSGAGDAEVR 120
Query: 121 LFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVEVGNPHVVWSASEDGTLRQHDFRQG 180
LFN SR SGR DDNAI PSALYQCHTRRVKKLAVE GNP+VVWSASEDGTLRQHDFR+
Sbjct: 121 LFNTSRLSGRAEDDNAIIPSALYQCHTRRVKKLAVEPGNPNVVWSASEDGTLRQHDFRES 180
Query: 181 SSCPPAGSSHQECRNILLDLRCGAKRSLADPPKQTLSLKSCDISSTRPHLLLVGGSDAFA 240
+SCPPAG++HQECR++LLDLR GAKR+LADPPKQTLSLKSCDIS+TRPHLLLVGGSDAFA
Sbjct: 181 TSCPPAGTAHQECRSVLLDLRSGAKRALADPPKQTLSLKSCDISATRPHLLLVGGSDAFA 240
Query: 241 RLYDRRMLPPLTSCQKRMSPPPCVNYFCPMHLSEHGRSSLHLTHVTFSPNGEEVLLSYSG 300
RLYDRRMLPPL S +KRM PPPCVNYFCPMHLSE GR++LHLTHVTFSPNGEEVLLSYSG
Sbjct: 241 RLYDRRMLPPLASSRKRMPPPPCVNYFCPMHLSERGRTNLHLTHVTFSPNGEEVLLSYSG 300
Query: 301 EHVYLMDVNHA--GGRAMRYTVGDASKIMSFTPTLNGLELQPPIHDFLQTNIRVRGEVAT 358
EHVYLM+VN+ M+YT GD + SF+ L+ +E P + Q AT
Sbjct: 301 EHVYLMNVNNGICSTGIMQYTPGDVDNLFSFSNNLHDVESPPQVSTTPQNGFHRSSNAAT 360
Query: 359 GLGKCRMLVEIARNSLEEGKHPYYGIEACNEVLEGHLSGIGPMLRHECLCIRAALLLKRK 418
+ KC LVEIA+ SLEEG +Y IEA NEVL+ H + I LRHECLC RAALLLKRK
Sbjct: 361 -VKKCTELVEIAKWSLEEGTDVFYAIEAANEVLDAHSNDIESALRHECLCTRAALLLKRK 419
Query: 419 WKNDAQMAIRDCYNARRIDSSSFRAHLYMSEALEQLCKYKEALDFAIAAQCLDPSNSVMA 478
WKNDA MA+RDC+NARRID+SSF+AH YMSEAL+QL K KEALDFA AAQ ++PS++ +
Sbjct: 420 WKNDAHMAVRDCHNARRIDASSFKAHYYMSEALQQLGKCKEALDFATAAQHMNPSDADIV 479
Query: 479 EKVENIKKHIXXXXXXXXXXXXDGGARSEPRTGRVLSLSDIIYRSEANSDASQDGPXXXX 538
KVE+IK+ + G T RVLSLSDI+YRSEANSD+S D
Sbjct: 480 AKVESIKRDLQAAGAEKNEETGAG-------TTRVLSLSDILYRSEANSDSSHDMSRSER 532
Query: 539 XXXXXXXXXXXXFHTSVPGDEGRDVEANFLHGSLNVRIHRRGDSA--RETVDANXXXXXX 596
TS+ DEGRD ++N + GSLN+RIHR GD TVD
Sbjct: 533 EDSDYDEELELDIQTSLSDDEGRDTDSNSMRGSLNLRIHRVGDDKPMENTVD--NASSGT 590
Query: 597 XXXXQNDRIPYQPETVIDMKQRYVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEK 656
QNDR YQPE IDMK+RYVGHCNVGTDIKQASFLGQRG+YIASGSDDGRWFIWEK
Sbjct: 591 ASSSQNDRTSYQPEGAIDMKRRYVGHCNVGTDIKQASFLGQRGEYIASGSDDGRWFIWEK 650
Query: 657 QTGRLIKMLLGDEA 670
QTGRL+K+L+GDE+
Sbjct: 651 QTGRLMKVLVGDES 664
>UNIPROTKB|Q8N5D0 [details] [associations]
symbol:WDTC1 "WD and tetratricopeptide repeats protein 1"
species:9606 "Homo sapiens" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0001701 "in utero embryonic development" evidence=IEA]
[GO:0004857 "enzyme inhibitor activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0006006 "glucose metabolic process" evidence=IEA] [GO:0008361
"regulation of cell size" evidence=IEA] [GO:0032869 "cellular
response to insulin stimulus" evidence=IEA] [GO:0035264
"multicellular organism growth" evidence=IEA] [GO:0042393 "histone
binding" evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0045717 "negative regulation of fatty acid
biosynthetic process" evidence=IEA] [GO:0055082 "cellular chemical
homeostasis" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50005 PROSITE:PS50082 PROSITE:PS50293
PROSITE:PS50294 SMART:SM00320 GO:GO:0043231 GO:GO:0005829
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0032869 EMBL:CH471059 GO:GO:0004857 eggNOG:COG2319
GO:GO:0001701 GO:GO:0006006 GO:GO:0008361 GO:GO:0000122
GO:GO:0045717 Gene3D:1.25.40.10 GO:GO:0035264 InterPro:IPR013105
Pfam:PF07719 PDB:3I7N PDBsum:3I7N EMBL:AL663123 EMBL:AL590640
EMBL:AK001734 EMBL:BC032523 EMBL:AB028960 IPI:IPI00186384
IPI:IPI00398202 IPI:IPI00398203 IPI:IPI00398204 IPI:IPI00398205
IPI:IPI00398206 RefSeq:NP_055838.2 UniGene:Hs.469154
ProteinModelPortal:Q8N5D0 SMR:Q8N5D0 DIP:DIP-31627N IntAct:Q8N5D0
STRING:Q8N5D0 PhosphoSite:Q8N5D0 DMDM:41018470 PaxDb:Q8N5D0
PRIDE:Q8N5D0 DNASU:23038 Ensembl:ENST00000319394
Ensembl:ENST00000361771 Ensembl:ENST00000447062 GeneID:23038
KEGG:hsa:23038 UCSC:uc001bno.3 UCSC:uc001bnq.3 CTD:23038
GeneCards:GC01P027561 HGNC:HGNC:29175 HPA:HPA028177 HPA:HPA028180
HPA:HPA028182 neXtProt:NX_Q8N5D0 PharmGKB:PA134981539
HOGENOM:HOG000231334 HOVERGEN:HBG059105 InParanoid:Q8N5D0 KO:K11807
OMA:HRYCGHC OrthoDB:EOG4CRKZJ PhylomeDB:Q8N5D0 ChiTaRS:WDTC1
EvolutionaryTrace:Q8N5D0 GenomeRNAi:23038 NextBio:44050 Bgee:Q8N5D0
CleanEx:HS_WDTC1 Genevestigator:Q8N5D0 GermOnline:ENSG00000142784
GO:GO:0055082 Uniprot:Q8N5D0
Length = 677
Score = 427 (155.4 bits), Expect = 6.6e-54, Sum P(2) = 6.6e-54
Identities = 140/469 (29%), Positives = 210/469 (44%)
Query: 37 VRRLSQERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANV 96
+RRL E EL+GH GCVN + WN KG LL SGSDD H VW K L S+ TGH+AN+
Sbjct: 34 IRRLGLEAELQGHSGCVNCLEWNEKGDLLASGSDDQHTIVWDPLHHKKLLSMHTGHTANI 93
Query: 97 FCTKFVPETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVE 156
F KF+P D ++++GA D++V + +L+ + + ++ HT RVK++A
Sbjct: 94 FSVKFLPHAGDRILITGAADSKVHVHDLT------VKETI----HMFGDHTNRVKRIATA 143
Query: 157 VGNPHVVWSASEDGTLRQHDFRQGSSCPPAGSSHQECRNILLDLR--CGA---KRSLADP 211
P+ WSA+EDG +RQ+D R+ S H E +L+DL CG + L
Sbjct: 144 PMWPNTFWSAAEDGLIRQYDLRENSK-------HSE---VLIDLTEYCGQLVEAKCLTVN 193
Query: 212 PKQTLSLKSCDISSTRPHLLLVGGSDAFARLYDRRMLPPL---TSCQKRMS-PPPCVNYF 267
P+ L + ++ P + L + P T C ++ P Y+
Sbjct: 194 PQDNNCLA---VGASGPFVRLYDIRMIHNHRKSMKQSPSAGVHTFCDRQKPLPDGAAQYY 250
Query: 268 C----PMHLSEHGRSS--LHLTHVTFSPNGEEVLLSYSGEHVYLMDVNHAGGRAMRYTVG 321
P+ L ++ L T+VTFSPNG E+L++ GE VYL D+ + + YT
Sbjct: 251 VAGHLPVKLPDYNNRLRVLVATYVTFSPNGTELLVNMGGEQVYLFDLTY---KQRPYTFL 307
Query: 322 DASKIMSFTPTLNGLELQPPIHDFLQTNIRVRGE---VATGLGKCRMLVEIARNSLEEGK 378
K S NG + + + + + + G VE+ LE K
Sbjct: 308 LPRKCHSSGEVQNGKMSTNGVSNGVSNGLHLHSNGFRLPESRGHVSPQVELPPY-LERVK 366
Query: 379 HPYYGIEACNEVLEG-HL-SGIGPMLRHECLCI--RAALLLKRKWKNDAQMAIRDCYNAR 434
AC + + L S H + RAA +KRKW D A+RDC A
Sbjct: 367 QQANEAFACQQWTQAIQLYSKAVQRAPHNAMLYGNRAAAYMKRKWDGDHYDALRDCLKAI 426
Query: 435 RIDSSSFRAHLYMSEALEQLCKYKEALDFAIAAQCLDPSNSVMAEKVEN 483
++ +AH ++ L +L KY A A +CLD E+ +
Sbjct: 427 SLNPCHLKAHFRLARCLFEL-KY-----VAEALECLDDFKGKFPEQAHS 469
Score = 192 (72.6 bits), Expect = 6.6e-54, Sum P(2) = 6.6e-54
Identities = 45/119 (37%), Positives = 60/119 (50%)
Query: 552 HTSVPGDEGRDVEANFLHGSLNVRIHRRGDSARETVDANXXXXXXXXXXQNDRIPYQPET 611
H+S GRD+ A S N ++G V D + + E
Sbjct: 468 HSSACDALGRDITAALF--SKNDGEEKKGPGGGAPV--RLRSTSRKDSISEDEMVLR-ER 522
Query: 612 VIDMKQRYVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEA 670
D + RY GHCN TDIK+A+F G YI SGSDDG +FIWEK+T L+++L GDE+
Sbjct: 523 SYDYQFRYCGHCNTTTDIKEANFFGSNAQYIVSGSDDGSFFIWEKETTNLVRVLQGDES 581
>UNIPROTKB|E2RA21 [details] [associations]
symbol:WDTC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0055082 "cellular chemical homeostasis"
evidence=IEA] [GO:0045717 "negative regulation of fatty acid
biosynthetic process" evidence=IEA] [GO:0042826 "histone
deacetylase binding" evidence=IEA] [GO:0042393 "histone binding"
evidence=IEA] [GO:0035264 "multicellular organism growth"
evidence=IEA] [GO:0032869 "cellular response to insulin stimulus"
evidence=IEA] [GO:0008361 "regulation of cell size" evidence=IEA]
[GO:0006006 "glucose metabolic process" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0004857 "enzyme inhibitor activity" evidence=IEA] [GO:0001701
"in utero embryonic development" evidence=IEA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50293 PROSITE:PS50294
SMART:SM00320 GO:GO:0005829 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 GO:GO:0032869 GO:GO:0004857 GO:GO:0001701
GO:GO:0006006 GO:GO:0008361 GO:GO:0000122 GO:GO:0045717
Gene3D:1.25.40.10 GO:GO:0035264 InterPro:IPR013105 Pfam:PF07719
GeneTree:ENSGT00530000062951 OMA:HRYCGHC GO:GO:0055082
EMBL:AAEX03001717 ProteinModelPortal:E2RA21
Ensembl:ENSCAFT00000019377 Uniprot:E2RA21
Length = 679
Score = 427 (155.4 bits), Expect = 6.9e-54, Sum P(2) = 6.9e-54
Identities = 140/469 (29%), Positives = 210/469 (44%)
Query: 37 VRRLSQERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANV 96
+RRL E EL+GH GCVN + WN KG LL SGSDD H VW K L S+ TGH+AN+
Sbjct: 34 IRRLGLEAELQGHSGCVNCLEWNEKGDLLASGSDDQHTIVWDPLHHKKLLSMHTGHTANI 93
Query: 97 FCTKFVPETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVE 156
F KF+P D ++++GA D++V + +L+ + + ++ HT RVK++A
Sbjct: 94 FSVKFLPHAGDRILITGAADSKVHVHDLT------VKETI----HMFGDHTNRVKRIATA 143
Query: 157 VGNPHVVWSASEDGTLRQHDFRQGSSCPPAGSSHQECRNILLDLR--CGA---KRSLADP 211
P+ WSA+EDG +RQ+D R+ S H E +L+DL CG + L
Sbjct: 144 PMWPNTFWSAAEDGLIRQYDLRENSK-------HSE---VLIDLTEYCGQLVEAKCLTVN 193
Query: 212 PKQTLSLKSCDISSTRPHLLLVGGSDAFARLYDRRMLPPL---TSCQKRMS-PPPCVNYF 267
P+ L + ++ P + L + P T C ++ P Y+
Sbjct: 194 PQDNNCLA---VGASGPFVRLYDIRMIHNHRKSMKQSPSAGVHTFCDRQKPLPDGAAQYY 250
Query: 268 C----PMHLSEHGRSS--LHLTHVTFSPNGEEVLLSYSGEHVYLMDVNHAGGRAMRYTVG 321
P+ L ++ L T+VTFSPNG E+L++ GE VYL D+ + + YT
Sbjct: 251 VAGHLPVKLPDYNNRLRVLVATYVTFSPNGTELLVNMGGEQVYLFDLTY---KQRPYTFL 307
Query: 322 DASKIMSFTPTLNGLELQPPIHDFLQTNIRVRGE---VATGLGKCRMLVEIARNSLEEGK 378
K S NG + + + + + + G VE+ LE K
Sbjct: 308 LPRKCHSSGEVQNGKMSTNGVSNGVSNGLHLHSNGFRLPENRGHVSPQVELPPY-LERVK 366
Query: 379 HPYYGIEACNEVLEG-HL-SGIGPMLRHECLCI--RAALLLKRKWKNDAQMAIRDCYNAR 434
AC + + L S H + RAA +KRKW D A+RDC A
Sbjct: 367 QQANEAFACQQWTQAIQLYSKAVQRAPHNAMLYGNRAAAYMKRKWDGDHYDALRDCLKAI 426
Query: 435 RIDSSSFRAHLYMSEALEQLCKYKEALDFAIAAQCLDPSNSVMAEKVEN 483
++ +AH ++ L +L KY A A +CLD E+ +
Sbjct: 427 SLNPCHLKAHFRLARCLFEL-KY-----VAEALECLDDFKGKFPEQAHS 469
Score = 192 (72.6 bits), Expect = 6.9e-54, Sum P(2) = 6.9e-54
Identities = 44/119 (36%), Positives = 59/119 (49%)
Query: 552 HTSVPGDEGRDVEANFLHGSLNVRIHRRGDSARETVDANXXXXXXXXXXQNDRIPYQPET 611
H+S GRD+ A S N ++G D + + E
Sbjct: 468 HSSACDALGRDITAALF--SKNDGEEKKGAGGGGGGPVRLRSTSRKDSISEDEMVLR-ER 524
Query: 612 VIDMKQRYVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEA 670
D + RY GHCN TDIK+A+F G YI SGSDDG +FIWEK+T L+++L GDE+
Sbjct: 525 SYDYQFRYCGHCNTTTDIKEANFFGSNAQYIVSGSDDGSFFIWEKETTNLVRVLQGDES 583
>UNIPROTKB|B6CVL4 [details] [associations]
symbol:WDTC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0055082 "cellular chemical homeostasis" evidence=IEA]
[GO:0045717 "negative regulation of fatty acid biosynthetic
process" evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0035264 "multicellular organism growth" evidence=IEA]
[GO:0032869 "cellular response to insulin stimulus" evidence=IEA]
[GO:0008361 "regulation of cell size" evidence=IEA] [GO:0006006
"glucose metabolic process" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004857
"enzyme inhibitor activity" evidence=IEA] [GO:0001701 "in utero
embryonic development" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50293 PROSITE:PS50294
SMART:SM00320 GO:GO:0005829 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 GO:GO:0032869 GO:GO:0004857 eggNOG:COG2319
GO:GO:0001701 GO:GO:0006006 GO:GO:0008361 GO:GO:0000122
GO:GO:0045717 Gene3D:1.25.40.10 GO:GO:0035264 InterPro:IPR013105
Pfam:PF07719 GeneTree:ENSGT00530000062951 CTD:23038
HOGENOM:HOG000231334 HOVERGEN:HBG059105 KO:K11807 OMA:HRYCGHC
OrthoDB:EOG4CRKZJ GO:GO:0055082 EMBL:CU466983 EMBL:FP067355
EMBL:EU559626 RefSeq:NP_001129436.1 UniGene:Ssc.11356
ProteinModelPortal:B6CVL4 STRING:B6CVL4 Ensembl:ENSSSCT00000003964
GeneID:100190994 KEGG:ssc:100190994 Uniprot:B6CVL4
Length = 678
Score = 427 (155.4 bits), Expect = 1.1e-53, Sum P(2) = 1.1e-53
Identities = 140/469 (29%), Positives = 210/469 (44%)
Query: 37 VRRLSQERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANV 96
+RRL E EL+GH GCVN + WN KG LL SGSDD H VW K L S+ TGH+AN+
Sbjct: 34 IRRLGLEAELQGHSGCVNCLEWNEKGDLLASGSDDQHTIVWDPLHHKKLLSMHTGHTANI 93
Query: 97 FCTKFVPETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVE 156
F KF+P D ++++GA D++V + +L+ + + ++ HT RVK++A
Sbjct: 94 FSVKFLPHAGDRILITGAADSKVHVHDLT------VKETI----HMFGDHTNRVKRIATA 143
Query: 157 VGNPHVVWSASEDGTLRQHDFRQGSSCPPAGSSHQECRNILLDLR--CGA---KRSLADP 211
P+ WSA+EDG +RQ+D R+ S H E +L+DL CG + L
Sbjct: 144 PMWPNTFWSAAEDGLIRQYDLRENSK-------HSE---VLIDLTEYCGQLVEAKCLTVN 193
Query: 212 PKQTLSLKSCDISSTRPHLLLVGGSDAFARLYDRRMLPPL---TSCQKRMS-PPPCVNYF 267
P+ L + ++ P + L + P T C ++ P Y+
Sbjct: 194 PQDNNCLA---VGASGPFVRLYDIRMIHNHRKSMKQSPSAGVHTFCDRQKPLPDGAAQYY 250
Query: 268 C----PMHLSEHGRSS--LHLTHVTFSPNGEEVLLSYSGEHVYLMDVNHAGGRAMRYTVG 321
P+ L ++ L T+VTFSPNG E+L++ GE VYL D+ + + YT
Sbjct: 251 VAGHLPVKLPDYNNRLRVLVATYVTFSPNGTELLVNMGGEQVYLFDLTY---KQRPYTFL 307
Query: 322 DASKIMSFTPTLNGLELQPPIHDFLQTNIRVRGE---VATGLGKCRMLVEIARNSLEEGK 378
K S NG + + + + + + G VE+ LE K
Sbjct: 308 LPRKCHSSGEVQNGKMSTNGVSNGVSNGLHLHSNGFRLPESRGHVSPQVELPPY-LERVK 366
Query: 379 HPYYGIEACNEVLEG-HL-SGIGPMLRHECLCI--RAALLLKRKWKNDAQMAIRDCYNAR 434
AC + + L S H + RAA +KRKW D A+RDC A
Sbjct: 367 QQANEAFACQQWTQAIQLYSKAVQRAPHNAMLYGNRAAAYMKRKWDGDHYDALRDCLKAI 426
Query: 435 RIDSSSFRAHLYMSEALEQLCKYKEALDFAIAAQCLDPSNSVMAEKVEN 483
++ +AH ++ L +L KY A A +CLD E+ +
Sbjct: 427 SLNPCHLKAHFRLARCLFEL-KY-----VAEALECLDDFKGKFPEQAHS 469
Score = 190 (71.9 bits), Expect = 1.1e-53, Sum P(2) = 1.1e-53
Identities = 34/61 (55%), Positives = 43/61 (70%)
Query: 610 ETVIDMKQRYVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDE 669
E D + RY GHCN TDIK+A+F G YI SGSDDG +FIWEK+T L+++L GDE
Sbjct: 522 ERSYDYQFRYCGHCNTTTDIKEANFFGSNAQYIVSGSDDGSFFIWEKETTNLVRVLQGDE 581
Query: 670 A 670
+
Sbjct: 582 S 582
>MGI|MGI:2685541 [details] [associations]
symbol:Wdtc1 "WD and tetratricopeptide repeats 1"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0001701 "in utero embryonic development" evidence=IMP]
[GO:0004857 "enzyme inhibitor activity" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006006 "glucose metabolic process" evidence=IMP] [GO:0008361
"regulation of cell size" evidence=IMP] [GO:0032869 "cellular
response to insulin stimulus" evidence=IMP] [GO:0035264
"multicellular organism growth" evidence=IMP] [GO:0042393 "histone
binding" evidence=IPI] [GO:0042826 "histone deacetylase binding"
evidence=IPI] [GO:0043086 "negative regulation of catalytic
activity" evidence=IDA] [GO:0045717 "negative regulation of fatty
acid biosynthetic process" evidence=IMP;IDA] [GO:0055082 "cellular
chemical homeostasis" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50005 PROSITE:PS50082
PROSITE:PS50293 PROSITE:PS50294 SMART:SM00320 MGI:MGI:2685541
GO:GO:0005829 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 GO:GO:0032869 GO:GO:0004857 eggNOG:COG2319
GO:GO:0001701 GO:GO:0006006 GO:GO:0008361 GO:GO:0000122
GO:GO:0045717 Gene3D:1.25.40.10 GO:GO:0035264 InterPro:IPR013105
Pfam:PF07719 GeneTree:ENSGT00530000062951 CTD:23038
HOGENOM:HOG000231334 HOVERGEN:HBG059105 KO:K11807 OMA:HRYCGHC
OrthoDB:EOG4CRKZJ ChiTaRS:WDTC1 GO:GO:0055082 EMBL:BC048824
EMBL:BC057107 IPI:IPI00108450 RefSeq:NP_955010.1 UniGene:Mm.226576
ProteinModelPortal:Q80ZK9 SMR:Q80ZK9 STRING:Q80ZK9
PhosphoSite:Q80ZK9 PaxDb:Q80ZK9 PRIDE:Q80ZK9
Ensembl:ENSMUST00000043305 GeneID:230796 KEGG:mmu:230796
InParanoid:Q80ZK9 NextBio:380168 Bgee:Q80ZK9 CleanEx:MM_WDTC1
Genevestigator:Q80ZK9 GermOnline:ENSMUSG00000037622 Uniprot:Q80ZK9
Length = 677
Score = 375 (137.1 bits), Expect = 3.0e-53, Sum P(3) = 3.0e-53
Identities = 100/290 (34%), Positives = 148/290 (51%)
Query: 37 VRRLSQERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANV 96
+RRL E EL+GH GCVN + WN KG LL SGSDD H VW K L S+ TGH+AN+
Sbjct: 34 IRRLGLEAELQGHSGCVNCLEWNEKGDLLASGSDDQHTIVWDPLHHKKLLSMHTGHTANI 93
Query: 97 FCTKFVPETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVE 156
F KF+P D ++++GA D++V + +L+ + + ++ HT RVK++A
Sbjct: 94 FSVKFLPHAGDRILITGAADSKVHVHDLT------VKETI----HMFGDHTNRVKRIATA 143
Query: 157 VGNPHVVWSASEDGTLRQHDFRQGSSCPPAGSSHQECRNILLDLR--CGAK---RSLADP 211
P+ WSA+EDG +RQ+D R+ S H E +L+DL CG + L
Sbjct: 144 PMWPNTFWSAAEDGLIRQYDLRENSK-------HSE---VLIDLTEYCGPMVEAKCLTVN 193
Query: 212 PKQTLSLKSCDISSTRPHLLLVGGSDAFARLYDRRMLPPL---TSCQKRMS-PPPCVNYF 267
P+ L + ++ P + L R P T C ++ P Y+
Sbjct: 194 PQDNNCLA---VGASGPFVRLYDIRMIHNHRKSMRQSPSAGVHTFCDRQKPLPDGAAQYY 250
Query: 268 C----PMHLSEHGRSSLHL---THVTFSPNGEEVLLSYSGEHVYLMDVNH 310
P+ L ++ S L + T+VTFSPNG E+L++ GE VYL D+ +
Sbjct: 251 VAGHLPVKLPDYN-SRLRVLVATYVTFSPNGTELLVNMGGEQVYLFDLTY 299
Score = 190 (71.9 bits), Expect = 3.0e-53, Sum P(3) = 3.0e-53
Identities = 34/61 (55%), Positives = 43/61 (70%)
Query: 610 ETVIDMKQRYVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDE 669
E D + RY GHCN TDIK+A+F G YI SGSDDG +FIWEK+T L+++L GDE
Sbjct: 521 ERSYDYQFRYCGHCNTTTDIKEANFFGSNAQYIVSGSDDGSFFIWEKETTNLVRVLQGDE 580
Query: 670 A 670
+
Sbjct: 581 S 581
Score = 96 (38.9 bits), Expect = 3.0e-53, Sum P(3) = 3.0e-53
Identities = 25/74 (33%), Positives = 36/74 (48%)
Query: 410 RAALLLKRKWKNDAQMAIRDCYNARRIDSSSFRAHLYMSEALEQLCKYKEALDFAIAAQC 469
RAA +KRKW D A+RDC A ++ +AH ++ L +L KY A A +C
Sbjct: 401 RAAAYMKRKWDGDHYDALRDCLKAISLNPCHLKAHFRLARCLFEL-KY-----VAEALEC 454
Query: 470 LDPSNSVMAEKVEN 483
LD E+ +
Sbjct: 455 LDDFKGKFPEQAHS 468
Score = 50 (22.7 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 24/91 (26%), Positives = 36/91 (39%)
Query: 214 QTLSLKSCDISSTRPHLLLVGGSDAFA---RLYDRRMLPPLTSCQKRMSPPPCVNYFCPM 270
Q + L S + PH ++ G+ A A R +D L C K +S PC
Sbjct: 379 QAIQLYSQAVQKA-PHNAMLYGNRAAAYMKRKWDGDHYDALRDCLKAISLNPC------- 430
Query: 271 HLSEHGRSSLHLTHVTFSPNGEEVLLSYSGE 301
HL H R + L + + E L + G+
Sbjct: 431 HLKAHFRLARCLFELKYVAEALECLDDFKGK 461
Score = 46 (21.3 bits), Expect = 1.1e-16, Sum P(3) = 1.1e-16
Identities = 33/132 (25%), Positives = 55/132 (41%)
Query: 285 VTFSPNGEEVLLS-YSGEHVYLMDVN---HAGGRAMRYTVGDASKIMSFTPTLNGLELQP 340
+ + P + LLS ++G + V HAG R + D SK+ ++ L ++
Sbjct: 72 IVWDPLHHKKLLSMHTGHTANIFSVKFLPHAGDRILITGAAD-SKVH-----VHDLTVKE 125
Query: 341 PIHDFLQTNIRVRGEVATGLGKCRMLVEIARNSLEEGKHPYYGIEACN---EVLEGHLSG 397
IH F RV+ +AT M ++ E+G Y + + EVL
Sbjct: 126 TIHMFGDHTNRVK-RIATA----PMWPNTFWSAAEDGLIRQYDLRENSKHSEVLIDLTEY 180
Query: 398 IGPMLRHECLCI 409
GPM+ +CL +
Sbjct: 181 CGPMVEAKCLTV 192
>RGD|1310362 [details] [associations]
symbol:Wdtc1 "WD and tetratricopeptide repeats 1" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0001701 "in utero embryonic development" evidence=IEA;ISO]
[GO:0004857 "enzyme inhibitor activity" evidence=IEA;ISO]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005829 "cytosol"
evidence=IEA;ISO] [GO:0006006 "glucose metabolic process"
evidence=IEA;ISO] [GO:0008361 "regulation of cell size"
evidence=IEA;ISO] [GO:0032869 "cellular response to insulin
stimulus" evidence=IEA;ISO] [GO:0035264 "multicellular organism
growth" evidence=IEA;ISO] [GO:0042393 "histone binding"
evidence=IEA;ISO] [GO:0042826 "histone deacetylase binding"
evidence=IEA;ISO] [GO:0043086 "negative regulation of catalytic
activity" evidence=ISO] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=ISO] [GO:0045717 "negative regulation of fatty
acid biosynthetic process" evidence=IEA;ISO] [GO:0055082 "cellular
chemical homeostasis" evidence=IEA;ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50293
PROSITE:PS50294 SMART:SM00320 RGD:1310362 GO:GO:0005829
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0032869
GO:GO:0004857 GO:GO:0001701 GO:GO:0006006 GO:GO:0008361
GO:GO:0000122 GO:GO:0045717 Gene3D:1.25.40.10 GO:GO:0035264
InterPro:IPR013105 Pfam:PF07719 GeneTree:ENSGT00530000062951
EMBL:CH473968 CTD:23038 KO:K11807 OMA:HRYCGHC OrthoDB:EOG4CRKZJ
GO:GO:0055082 IPI:IPI00366746 RefSeq:NP_001101378.1
UniGene:Rn.16646 Ensembl:ENSRNOT00000011311 GeneID:313020
KEGG:rno:313020 UCSC:RGD:1310362 NextBio:665469 Uniprot:D4A7Z0
Length = 676
Score = 372 (136.0 bits), Expect = 7.1e-53, Sum P(3) = 7.1e-53
Identities = 99/290 (34%), Positives = 148/290 (51%)
Query: 37 VRRLSQERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANV 96
+RRL E EL+GH GCVN + WN KG LL SGSDD H VW K L S+ TGH+AN+
Sbjct: 34 IRRLGLEAELQGHSGCVNCLEWNEKGDLLASGSDDQHTIVWDPLHHKKLLSMHTGHTANI 93
Query: 97 FCTKFVPETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVE 156
F KF+P D ++++GA D++V + +L+ + + ++ HT RVK++A
Sbjct: 94 FSVKFLPHAGDRILITGAADSKVHVHDLT------VKETI----HMFGDHTNRVKRIATA 143
Query: 157 VGNPHVVWSASEDGTLRQHDFRQGSSCPPAGSSHQECRNILLDLR--CGAK---RSLADP 211
P+ WSA+EDG +RQ+D R+ S H E +L+DL CG + L
Sbjct: 144 PMWPNTFWSAAEDGLIRQYDLRENSK-------HSE---VLIDLTEYCGPMVEAKCLTVN 193
Query: 212 PKQTLSLKSCDISSTRPHLLLVGGSDAFARLYDRRMLPPL---TSCQKRMS-PPPCVNYF 267
P+ L + ++ P + L + P T C ++ P Y+
Sbjct: 194 PQDNNCLA---VGASGPFVRLYDIRMIHNHRKSMKQSPSAGVHTFCDRQKPLPDGAAQYY 250
Query: 268 C----PMHLSEHGRSSLHL---THVTFSPNGEEVLLSYSGEHVYLMDVNH 310
P+ L ++ S L + T+VTFSPNG E+L++ GE VYL D+ +
Sbjct: 251 VAGHLPVKLPDYN-SRLRVLVATYVTFSPNGTELLVNMGGEQVYLFDLTY 299
Score = 190 (71.9 bits), Expect = 7.1e-53, Sum P(3) = 7.1e-53
Identities = 34/61 (55%), Positives = 43/61 (70%)
Query: 610 ETVIDMKQRYVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDE 669
E D + RY GHCN TDIK+A+F G YI SGSDDG +FIWEK+T L+++L GDE
Sbjct: 520 ERSYDYQFRYCGHCNTTTDIKEANFFGSNAQYIVSGSDDGSFFIWEKETTNLVRVLQGDE 579
Query: 670 A 670
+
Sbjct: 580 S 580
Score = 96 (38.9 bits), Expect = 7.1e-53, Sum P(3) = 7.1e-53
Identities = 25/74 (33%), Positives = 36/74 (48%)
Query: 410 RAALLLKRKWKNDAQMAIRDCYNARRIDSSSFRAHLYMSEALEQLCKYKEALDFAIAAQC 469
RAA +KRKW D A+RDC A ++ +AH ++ L +L KY A A +C
Sbjct: 401 RAAAYMKRKWDGDHYDALRDCLKAISLNPCHLKAHFRLARCLFEL-KY-----VAEALEC 454
Query: 470 LDPSNSVMAEKVEN 483
LD E+ +
Sbjct: 455 LDDFKGKFPEQAHS 468
Score = 50 (22.7 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 24/91 (26%), Positives = 36/91 (39%)
Query: 214 QTLSLKSCDISSTRPHLLLVGGSDAFA---RLYDRRMLPPLTSCQKRMSPPPCVNYFCPM 270
Q + L S + PH ++ G+ A A R +D L C K +S PC
Sbjct: 379 QAIQLYSKAVQKA-PHNAMLYGNRAAAYMKRKWDGDHYDALRDCLKAISLNPC------- 430
Query: 271 HLSEHGRSSLHLTHVTFSPNGEEVLLSYSGE 301
HL H R + L + + E L + G+
Sbjct: 431 HLKAHFRLARCLFELKYVAEALECLDDFKGK 461
Score = 46 (21.3 bits), Expect = 1.1e-16, Sum P(3) = 1.1e-16
Identities = 33/132 (25%), Positives = 55/132 (41%)
Query: 285 VTFSPNGEEVLLS-YSGEHVYLMDVN---HAGGRAMRYTVGDASKIMSFTPTLNGLELQP 340
+ + P + LLS ++G + V HAG R + D SK+ ++ L ++
Sbjct: 72 IVWDPLHHKKLLSMHTGHTANIFSVKFLPHAGDRILITGAAD-SKVH-----VHDLTVKE 125
Query: 341 PIHDFLQTNIRVRGEVATGLGKCRMLVEIARNSLEEGKHPYYGIEACN---EVLEGHLSG 397
IH F RV+ +AT M ++ E+G Y + + EVL
Sbjct: 126 TIHMFGDHTNRVK-RIATA----PMWPNTFWSAAEDGLIRQYDLRENSKHSEVLIDLTEY 180
Query: 398 IGPMLRHECLCI 409
GPM+ +CL +
Sbjct: 181 CGPMVEAKCLTV 192
>UNIPROTKB|E1C4X5 [details] [associations]
symbol:WDTC1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0001701 "in utero
embryonic development" evidence=IEA] [GO:0004857 "enzyme inhibitor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0006006 "glucose metabolic
process" evidence=IEA] [GO:0008361 "regulation of cell size"
evidence=IEA] [GO:0032869 "cellular response to insulin stimulus"
evidence=IEA] [GO:0035264 "multicellular organism growth"
evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0045717
"negative regulation of fatty acid biosynthetic process"
evidence=IEA] [GO:0055082 "cellular chemical homeostasis"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50293 PROSITE:PS50294
SMART:SM00320 GO:GO:0005829 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 GO:GO:0032869 GO:GO:0004857 GO:GO:0006006
GO:GO:0008361 GO:GO:0000122 GO:GO:0045717 Gene3D:1.25.40.10
GeneTree:ENSGT00530000062951 OMA:HRYCGHC GO:GO:0055082
EMBL:AADN02051275 IPI:IPI00603574 ProteinModelPortal:E1C4X5
PRIDE:E1C4X5 Ensembl:ENSGALT00000001392 NextBio:20822612
Uniprot:E1C4X5
Length = 671
Score = 363 (132.8 bits), Expect = 3.3e-52, Sum P(3) = 3.3e-52
Identities = 93/284 (32%), Positives = 143/284 (50%)
Query: 37 VRRLSQERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANV 96
+RRL E EL+GH GCVN + WN KG LL SGSDD H VW K L S+ TGH+AN+
Sbjct: 34 IRRLGLEAELQGHSGCVNCLEWNEKGDLLASGSDDQHTIVWDPLHHKKLLSMHTGHTANI 93
Query: 97 FCTKFVPETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVE 156
F KF+P + D ++++GA D++V + +L+ + + ++ HT RVK++A
Sbjct: 94 FSVKFLPHSGDRILITGAADSKVHVHDLT------VKETI----HMFGDHTNRVKRIATA 143
Query: 157 VGNPHVVWSASEDGTLRQHDFRQGSSCPPAGSSHQECRNILLDLRCGAKRSLADPPKQTL 216
P+ WSA+EDG +RQ+D R+ S E L++ +C L P+
Sbjct: 144 PMWPNTFWSAAEDGLIRQYDLRENSKRSEVLIDLTEYCGQLVEAKC-----LTVNPQDNN 198
Query: 217 SLKSCDISSTRPHLLLVGGSDAFARLYDRRMLPPL---TSCQKRMS-PPPCVNYFC---- 268
L + ++ P + L + P T C ++ P Y+
Sbjct: 199 YLA---VGASGPFVRLYDIRMIHNHRKSMKQCPSAGVHTFCDRQKPLPDGAAQYYVAGHL 255
Query: 269 PMHLSEHGRSS--LHLTHVTFSPNGEEVLLSYSGEHVYLMDVNH 310
P+ L ++ L T+VTFSP+G E+L++ GE VYL D+ +
Sbjct: 256 PVKLPDYNNRLRVLVATYVTFSPDGTELLVNMGGEQVYLFDLTY 299
Score = 194 (73.4 bits), Expect = 3.3e-52, Sum P(3) = 3.3e-52
Identities = 35/61 (57%), Positives = 43/61 (70%)
Query: 610 ETVIDMKQRYVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDE 669
E D K RY GHCN TDIK+A+F G YI SGSDDG +FIWEK+T L+++L GDE
Sbjct: 515 ERSYDYKFRYCGHCNTTTDIKEANFFGSNAQYIVSGSDDGSFFIWEKETTNLVRVLQGDE 574
Query: 670 A 670
+
Sbjct: 575 S 575
Score = 96 (38.9 bits), Expect = 3.3e-52, Sum P(3) = 3.3e-52
Identities = 25/74 (33%), Positives = 36/74 (48%)
Query: 410 RAALLLKRKWKNDAQMAIRDCYNARRIDSSSFRAHLYMSEALEQLCKYKEALDFAIAAQC 469
RAA +KRKW D A+RDC A ++ +AH ++ L +L KY A A +C
Sbjct: 398 RAAAYMKRKWDGDHYDALRDCLKAISLNPCHLKAHFRLARCLFEL-KY-----VAEALEC 451
Query: 470 LDPSNSVMAEKVEN 483
LD E+ +
Sbjct: 452 LDDFKGKFPEQAHS 465
Score = 46 (21.3 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 22/90 (24%), Positives = 33/90 (36%)
Query: 214 QTLSLKSCDISSTRPHLLLVGGSDA--FARLYDRRMLPPLTSCQKRMSPPPCVNYFCPMH 271
Q + L S + + +L G A R +D L C K +S PC H
Sbjct: 376 QAIQLYSKAVQKAPNNAMLYGNRAAAYMKRKWDGDHYDALRDCLKAISLNPC-------H 428
Query: 272 LSEHGRSSLHLTHVTFSPNGEEVLLSYSGE 301
L H R + L + + E L + G+
Sbjct: 429 LKAHFRLARCLFELKYVAEALECLDDFKGK 458
>FB|FBgn0000057 [details] [associations]
symbol:adp "adipose" species:7227 "Drosophila melanogaster"
[GO:0005975 "carbohydrate metabolic process" evidence=TAS]
[GO:0006629 "lipid metabolic process" evidence=IMP;TAS] [GO:0009269
"response to desiccation" evidence=IMP] [GO:0010891 "negative
regulation of sequestering of triglyceride" evidence=IMP]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0010883 "regulation of lipid
storage" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR015943
InterPro:IPR019734 Pfam:PF00400 PROSITE:PS50005 PROSITE:PS50082
PROSITE:PS50293 PROSITE:PS50294 SMART:SM00028 SMART:SM00320
EMBL:AE013599 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005975 GO:GO:0006629 GO:GO:0010891
Gene3D:1.25.40.10 InterPro:IPR013105 Pfam:PF07719 GO:GO:0009269
GeneTree:ENSGT00530000062951 KO:K11807 OMA:HRYCGHC EMBL:BT133245
EMBL:AJ556168 RefSeq:NP_611296.2 UniGene:Dm.681 SMR:Q7K7W5
STRING:Q7K7W5 EnsemblMetazoa:FBtr0086744 GeneID:37073
KEGG:dme:Dmel_CG5124 UCSC:CG5124-RA CTD:37073 FlyBase:FBgn0000057
InParanoid:Q7K7W5 OrthoDB:EOG4280GR GenomeRNAi:37073 NextBio:801825
Uniprot:Q7K7W5
Length = 628
Score = 297 (109.6 bits), Expect = 1.9e-44, Sum P(3) = 1.9e-44
Identities = 66/179 (36%), Positives = 94/179 (52%)
Query: 37 VRRLSQERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANV 96
V RL QE L GH+GCVN + W + G L SGSDD + +W +KL+H I T H NV
Sbjct: 54 VDRLEQEAVLVGHEGCVNCLEWTTDGMWLASGSDDYRVMIWDPFRKKLVHVIRTKHLGNV 113
Query: 97 FCTKFVPETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVE 156
F KF+P+T++ +V + A D + +++++ D N S + CH R K+LA
Sbjct: 114 FSVKFLPKTNNSIVATCAADKFIYVYDIN-------DPNETLFSCI--CHFSRAKRLATA 164
Query: 157 VGNPHVVWSASEDGTLRQHDFRQGSSCPPAGSSHQECRNILLDLRCGAKRSLADPPKQT 215
+PHV WSA EDG + Q D R+ C P N+ L + LA P++T
Sbjct: 165 QDSPHVFWSAGEDGCILQLDIREPHRCRPEEGIGVRLLNLHDQLENTEAKCLAINPRRT 223
Score = 230 (86.0 bits), Expect = 1.2e-36, Sum P(3) = 1.2e-36
Identities = 63/172 (36%), Positives = 89/172 (51%)
Query: 145 CHTRRVKKLAVEVGNPHVVWSASEDGTLRQHDFRQGSSCPPAGSSHQECRNILLDLRCGA 204
CH R K+LA +PHV WSA EDG + Q D R+ C P +E + L
Sbjct: 153 CHFSRAKRLATAQDSPHVFWSAGEDGCILQLDIREPHRCRP-----EEGIGVRL------ 201
Query: 205 KRSLADPPKQTLSLKSCDISSTRPHLLLVGGSDAFARLYDRRMLPPLTSCQKRMSPPPCV 264
+L D + T K I+ R L VG +D FAR+YDRR LP +S CV
Sbjct: 202 -LNLHDQLENT-EAKCLAINPRRTEYLAVGTNDPFARVYDRRKLPSTNG--NGLSA--CV 255
Query: 265 NYFCPMHLSEH-GRSSLH----LTHVTFSPNGEEVLLSYSGEHVYLMDVNHA 311
Y+ P + ++ R+ +H +T++TF+ NG E+L++ EHVY D+NHA
Sbjct: 256 AYYAPGQIVKNISRNIVHEPRGITYLTFNGNGTELLVNIGCEHVYRFDLNHA 307
Score = 186 (70.5 bits), Expect = 1.9e-44, Sum P(3) = 1.9e-44
Identities = 33/60 (55%), Positives = 44/60 (73%)
Query: 611 TVIDMKQRYVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEA 670
T D QRYVGHCNV TDIK+A++LG +G++IA+GSDDG +IWE TG++ + D A
Sbjct: 498 TARDYMQRYVGHCNVTTDIKEANYLGSQGEFIAAGSDDGNMYIWEGDTGKIRAVYRADSA 557
Score = 104 (41.7 bits), Expect = 1.9e-44, Sum P(3) = 1.9e-44
Identities = 22/73 (30%), Positives = 42/73 (57%)
Query: 389 EVLEGHLSGIGPMLRHECLCI-RAALLLKRKWKNDAQMAIRDCYNARRIDSSSFRAHLYM 447
+ ++ + + + + E L + RA L++R W D A+RDC+ A R+D S +AH +
Sbjct: 360 DAIDAYSAALAKYPQGEVLYLNRATALMRRGWFGDIYAALRDCHEALRLDPSYVKAHFRL 419
Query: 448 SEALEQLCKYKEA 460
+ AL +L + ++A
Sbjct: 420 ARALLELHRPQDA 432
>POMBASE|SPBC609.03 [details] [associations]
symbol:iqw1 "WD repeat protein, Iqw1" species:4896
"Schizosaccharomyces pombe" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005829 "cytosol" evidence=IDA] [GO:0008150
"biological_process" evidence=ND] [GO:0043234 "protein complex"
evidence=NAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPBC609.03 GO:GO:0005829 GO:GO:0043234
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 eggNOG:NOG292060 KO:K11795
PIR:T40574 RefSeq:NP_596313.1 ProteinModelPortal:O94527
EnsemblFungi:SPBC609.03.1 GeneID:2541121 KEGG:spo:SPBC609.03
OMA:GHITACK OrthoDB:EOG4T4H3G NextBio:20802234 Uniprot:O94527
Length = 809
Score = 375 (137.1 bits), Expect = 1.2e-43, Sum P(2) = 1.2e-43
Identities = 103/335 (30%), Positives = 169/335 (50%)
Query: 15 LDTRHTDTRPDVNHSLQMHSSLVRRLSQERELEGHQGCVNAISWNSKGSLLISGSDDTHI 74
LD R R ++ + +S+ + + ++EL GH GCVN + W++ G L+SGSDDT +
Sbjct: 11 LDYRDWFQRK-ISRDIYGNSTWLTGIDLQKELTGHTGCVNTLDWSADGEFLLSGSDDTRL 69
Query: 75 NVWS-YSSRKLLHSIETGHSANVFCTKFVPETSDELVVSGAGDAEVRLFNLSRFSGRGLD 133
VW ++ K H I TGH N+F KFVP +++ ++S +GD ++LF+L G+D
Sbjct: 70 IVWDVFNEYKPRHLISTGHVQNIFSAKFVPYSNNRQILSASGDKLIKLFDLDSSKEGGMD 129
Query: 134 DNAITPSALYQCHTRRVKKLAVEVGNPHVVWSASEDGTLRQHDFRQGSSCPPAGSSHQEC 193
T + + C VK + V N H SEDGT RQ+D R+ C + +C
Sbjct: 130 HGMETQTRCWSCALDSVKNI-VPCDNGHTFLVCSEDGTARQYDIREPHVC----NQDLDC 184
Query: 194 RNILLDLRCGAKRSLADPPKQTLSLKSCDISSTRPHLLLVGGSDAFARLYDRRMLPPLTS 253
+IL++ +P + ++L + +S + P+ +GG+ +A LYDRRM+
Sbjct: 185 PSILVNY---------NPYR--INLYTITMSPSNPYYFAIGGTHPYAFLYDRRMVKKSFR 233
Query: 254 CQKRMSPPP-----CVNYFCPM-HLSEHGRSSLHLTHVTFSP-NGEEVLLSYSGEHVYLM 306
M+ P CV F P + G ++T FS N E+L+S++ ++VYL
Sbjct: 234 DDWTMNTSPEKDCRCVRKFSPDGSCNSQGILDRYITCCQFSAANPNELLVSWNSDYVYLF 293
Query: 307 DVNHAGGRAMRYT-VGDASKIMSFTPTLNGLELQP 340
V+ + + D++K S P+L L+ QP
Sbjct: 294 HVHEDKSYTPTFNKIEDSNKKPS-KPSL--LQTQP 325
Score = 161 (61.7 bits), Expect = 1.2e-43, Sum P(2) = 1.2e-43
Identities = 32/66 (48%), Positives = 42/66 (63%)
Query: 619 YVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGD-EAGNVISSM 677
Y GHCNV + IK +F GQ +Y+ SGSDDGR+FIW+K ++ ++ GD EA NVI
Sbjct: 664 YYGHCNVES-IKNVNFYGQNDEYVMSGSDDGRFFIWDKLNASILAIIHGDSEAVNVIEGH 722
Query: 678 EECGLL 683
C L
Sbjct: 723 PRCPTL 728
>UNIPROTKB|F1NU19 [details] [associations]
symbol:F1NU19 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0030374
"ligand-dependent nuclear receptor transcription coactivator
activity" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0080008 "Cul4-RING ubiquitin ligase complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR000048 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50096 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0045944 GO:GO:0030374 GO:GO:0080008
GeneTree:ENSGT00530000062951 OMA:QTEAIGP EMBL:AADN02032625
EMBL:AADN02032626 EMBL:AADN02042411 EMBL:AADN02042412
EMBL:AADN02042413 EMBL:AADN02042414 EMBL:AADN02042415
EMBL:AADN02042416 EMBL:AADN02042417 EMBL:AADN02032627
EMBL:AADN02032628 EMBL:AADN02032629 EMBL:AADN02032630
EMBL:AADN02032631 EMBL:AADN02032632 EMBL:AADN02032633
EMBL:AADN02032634 IPI:IPI00576626 Ensembl:ENSGALT00000024895
Uniprot:F1NU19
Length = 825
Score = 271 (100.5 bits), Expect = 3.7e-35, Sum P(3) = 3.7e-35
Identities = 65/192 (33%), Positives = 98/192 (51%)
Query: 37 VRRLSQERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANV 96
++RL E L H GCVN I WN G ++SGSDDT++ + + SRK+L +I +GH AN+
Sbjct: 5 IQRLKLEATLNVHDGCVNTICWNDTGEYILSGSDDTNLVITNPYSRKVLTTIRSGHRANI 64
Query: 97 FCTKFVPETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVE 156
F KF+P T+D+ +VS +GD + N+ + D Y CH ++
Sbjct: 65 FSAKFLPCTNDKQIVSCSGDGVIFYTNVEQ-------DAETNRQCQYTCHYGTTYEIMTV 117
Query: 157 VGNPHVVWSASEDGTLRQHDFRQGSSCPPAGSSHQECRN-ILLDLRCGAKRSLADPPKQT 215
+P+ S EDGT+R D R +SC + ++C++ IL++ R A PP
Sbjct: 118 PNDPYTFLSCGEDGTVRWFDTRIKTSC-----TKEDCKDDILINCRRAATSVAICPPIPY 172
Query: 216 LSLKSCDISSTR 227
C SS R
Sbjct: 173 YLAVGCSDSSVR 184
Score = 135 (52.6 bits), Expect = 3.7e-35, Sum P(3) = 3.7e-35
Identities = 40/129 (31%), Positives = 61/129 (47%)
Query: 228 PHLLLVGGSDAFARLYDRRMLPP-LTSCQKRMSPPPCVNYFCPMHLSEHGRSSLHLTHVT 286
P+ L VG SD+ R+YDRRML T V F P HL+ S +T +
Sbjct: 171 PYYLAVGCSDSSVRIYDRRMLGTRATGNYAGRGTIGMVARFVPPHLNN---KSCRVTSLC 227
Query: 287 FSPNGEEVLLSYSGEHVYLMDVNHAGGRAMRYTVGDASKIMSFTPTLNGLELQPPIHDFL 346
+S +G+E+L+SYS +++YL D R ++ + + P + L L+ D+
Sbjct: 228 YSEDGQEILVSYSSDYIYLFDPKDDTARELKVPSSEERREELRQPPVKRLRLRG---DWS 284
Query: 347 QTNIRVRGE 355
T R R E
Sbjct: 285 DTGPRARPE 293
Score = 102 (41.0 bits), Expect = 3.7e-35, Sum P(3) = 3.7e-35
Identities = 23/64 (35%), Positives = 38/64 (59%)
Query: 615 MKQRYVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAGNVI 674
+K Y GH N T IK+A+F G +++ SGSD G FIW++ T + +L D +V+
Sbjct: 674 IKMVYKGHRNSRTMIKEANFWGS--NFVMSGSDCGHIFIWDRHTAEHLMLLEADN--HVV 729
Query: 675 SSME 678
+ ++
Sbjct: 730 NCLQ 733
>MGI|MGI:1921356 [details] [associations]
symbol:Dcaf6 "DDB1 and CUL4 associated factor 6"
species:10090 "Mus musculus" [GO:0005634 "nucleus" evidence=ISO]
[GO:0030374 "ligand-dependent nuclear receptor transcription
coactivator activity" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISO] InterPro:IPR017986 InterPro:IPR000048
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50096 PROSITE:PS50294 SMART:SM00015 SMART:SM00320
UniPathway:UPA00143 MGI:MGI:1921356 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0045944
GO:GO:0016567 GO:GO:0030374 GO:GO:0080008
GeneTree:ENSGT00530000062951 CTD:55827 eggNOG:NOG292060
HOGENOM:HOG000038027 HOVERGEN:HBG054871 KO:K11795 OMA:QTEAIGP
EMBL:AK004618 EMBL:AK077238 IPI:IPI00120084 RefSeq:NP_083035.1
UniGene:Mm.227605 ProteinModelPortal:Q9DC22 SMR:Q9DC22
IntAct:Q9DC22 STRING:Q9DC22 PhosphoSite:Q9DC22 PaxDb:Q9DC22
PRIDE:Q9DC22 Ensembl:ENSMUST00000027856 GeneID:74106 KEGG:mmu:74106
UCSC:uc007djb.2 InParanoid:Q9DC22 OrthoDB:EOG4KPT96 NextBio:339790
Bgee:Q9DC22 CleanEx:MM_IQWD1 Genevestigator:Q9DC22 Uniprot:Q9DC22
Length = 876
Score = 265 (98.3 bits), Expect = 7.4e-35, Sum P(3) = 7.4e-35
Identities = 64/192 (33%), Positives = 96/192 (50%)
Query: 37 VRRLSQERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANV 96
++RL E L H GCVN I WN G ++SGSDDT + + + SRK+L +I +GH AN+
Sbjct: 38 IQRLKLEATLNVHDGCVNTICWNDTGEYILSGSDDTKLVISNPYSRKVLTTIRSGHRANI 97
Query: 97 FCTKFVPETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVE 156
F KF+P T D+ +VS +GD + N+ + D + CH ++
Sbjct: 98 FSAKFLPCTDDKQIVSCSGDGVIFYTNIEQ-------DAETNRQCQFTCHYGTTYEIMTV 150
Query: 157 VGNPHVVWSASEDGTLRQHDFRQGSSCPPAGSSHQECRN-ILLDLRCGAKRSLADPPKQT 215
+P+ S EDGT+R D R +SC + ++C++ IL++ R A PP
Sbjct: 151 PNDPYTFLSCGEDGTVRWFDTRIKTSC-----TKEDCKDDILINCRRAATSVAICPPVPY 205
Query: 216 LSLKSCDISSTR 227
C SS R
Sbjct: 206 YLAVGCSDSSVR 217
Score = 140 (54.3 bits), Expect = 7.4e-35, Sum P(3) = 7.4e-35
Identities = 41/129 (31%), Positives = 61/129 (47%)
Query: 228 PHLLLVGGSDAFARLYDRRMLPP-LTSCQKRMSPPPCVNYFCPMHLSEHGRSSLHLTHVT 286
P+ L VG SD+ R+YDRRML T V F P HLS S +T +
Sbjct: 204 PYYLAVGCSDSSVRIYDRRMLGTRATGNYAGRGTTGMVARFIPSHLSN---KSCRVTSLC 260
Query: 287 FSPNGEEVLLSYSGEHVYLMDVNHAGGRAMRYTVGDASKIMSFTPTLNGLELQPPIHDFL 346
+S +G+E+L+SYS +++YL D R ++ + + P + L L+ D+
Sbjct: 261 YSEDGQEILVSYSSDYIYLFDPKDDTARELKTPSAEERREELRQPPVKRLRLRG---DWS 317
Query: 347 QTNIRVRGE 355
T R R E
Sbjct: 318 DTGPRARPE 326
Score = 102 (41.0 bits), Expect = 7.4e-35, Sum P(3) = 7.4e-35
Identities = 23/64 (35%), Positives = 38/64 (59%)
Query: 615 MKQRYVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAGNVI 674
+K Y GH N T IK+A+F G +++ SGSD G FIW++ T + +L D +V+
Sbjct: 725 VKMVYKGHRNSRTMIKEANFWG--ANFVMSGSDCGHIFIWDRHTAEHLMLLEADN--HVV 780
Query: 675 SSME 678
+ ++
Sbjct: 781 NCLQ 784
>UNIPROTKB|Q58WW2 [details] [associations]
symbol:DCAF6 "DDB1- and CUL4-associated factor 6"
species:9606 "Homo sapiens" [GO:0016567 "protein ubiquitination"
evidence=IEA;IC] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0030374
"ligand-dependent nuclear receptor transcription coactivator
activity" evidence=IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IGI]
InterPro:IPR017986 InterPro:IPR000048 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50096
PROSITE:PS50294 SMART:SM00015 SMART:SM00320 UniPathway:UPA00143
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0045944 EMBL:CH471067 GO:GO:0016567 EMBL:Z97876 GO:GO:0030374
GO:GO:0080008 EMBL:AY766164 EMBL:DQ768089 EMBL:AF116725
EMBL:AK297847 EMBL:AL031287 EMBL:AL033531 EMBL:AL033532
EMBL:BC025262 EMBL:AL136738 IPI:IPI00157836 IPI:IPI00164246
IPI:IPI00290516 IPI:IPI00910205 RefSeq:NP_001017977.1
RefSeq:NP_001185885.1 RefSeq:NP_001185886.1 RefSeq:NP_060912.2
UniGene:Hs.435741 PDB:3I7O PDBsum:3I7O ProteinModelPortal:Q58WW2
SMR:Q58WW2 DIP:DIP-44678N IntAct:Q58WW2 STRING:Q58WW2
PhosphoSite:Q58WW2 DMDM:74755134 PaxDb:Q58WW2 PRIDE:Q58WW2
DNASU:55827 Ensembl:ENST00000312263 Ensembl:ENST00000367840
Ensembl:ENST00000367843 Ensembl:ENST00000432587 GeneID:55827
KEGG:hsa:55827 UCSC:uc001gev.3 UCSC:uc001gew.3 UCSC:uc001gex.3
CTD:55827 GeneCards:GC01P167905 HGNC:HGNC:30002 HPA:HPA030852
MIM:610494 neXtProt:NX_Q58WW2 PharmGKB:PA165751150 eggNOG:NOG292060
HOGENOM:HOG000038027 HOVERGEN:HBG054871 KO:K11795 OMA:QTEAIGP
ChiTaRS:DCAF6 EvolutionaryTrace:Q58WW2 GenomeRNAi:55827
NextBio:61026 ArrayExpress:Q58WW2 Bgee:Q58WW2 CleanEx:HS_IQWD1
Genevestigator:Q58WW2 Uniprot:Q58WW2
Length = 860
Score = 264 (98.0 bits), Expect = 1.8e-34, Sum P(3) = 1.8e-34
Identities = 64/192 (33%), Positives = 97/192 (50%)
Query: 37 VRRLSQERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANV 96
++RL E L H GCVN I WN G ++SGSDDT + + + SRK+L +I +GH AN+
Sbjct: 38 IQRLKLEATLNVHDGCVNTICWNDTGEYILSGSDDTKLVISNPYSRKVLTTIRSGHRANI 97
Query: 97 FCTKFVPETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVE 156
F KF+P T+D+ +VS +GD + N+ + D + CH ++
Sbjct: 98 FSAKFLPCTNDKQIVSCSGDGVIFYTNVEQ-------DAETNRQCQFTCHYGTTYEIMTV 150
Query: 157 VGNPHVVWSASEDGTLRQHDFRQGSSCPPAGSSHQECRN-ILLDLRCGAKRSLADPPKQT 215
+P+ S EDGT+R D R +SC + ++C++ IL++ R A PP
Sbjct: 151 PNDPYTFLSCGEDGTVRWFDTRIKTSC-----TKEDCKDDILINCRRAATSVAICPPIPY 205
Query: 216 LSLKSCDISSTR 227
C SS R
Sbjct: 206 YLAVGCSDSSVR 217
Score = 137 (53.3 bits), Expect = 1.8e-34, Sum P(3) = 1.8e-34
Identities = 40/129 (31%), Positives = 61/129 (47%)
Query: 228 PHLLLVGGSDAFARLYDRRMLPP-LTSCQKRMSPPPCVNYFCPMHLSEHGRSSLHLTHVT 286
P+ L VG SD+ R+YDRRML T V F P HL+ S +T +
Sbjct: 204 PYYLAVGCSDSSVRIYDRRMLGTRATGNYAGRGTTGMVARFIPSHLNN---KSCRVTSLC 260
Query: 287 FSPNGEEVLLSYSGEHVYLMDVNHAGGRAMRYTVGDASKIMSFTPTLNGLELQPPIHDFL 346
+S +G+E+L+SYS +++YL D R ++ + + P + L L+ D+
Sbjct: 261 YSEDGQEILVSYSSDYIYLFDPKDDTARELKTPSAEERREELRQPPVKRLRLRG---DWS 317
Query: 347 QTNIRVRGE 355
T R R E
Sbjct: 318 DTGPRARPE 326
Score = 102 (41.0 bits), Expect = 1.8e-34, Sum P(3) = 1.8e-34
Identities = 23/64 (35%), Positives = 38/64 (59%)
Query: 615 MKQRYVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAGNVI 674
+K Y GH N T IK+A+F G +++ SGSD G FIW++ T + +L D +V+
Sbjct: 709 VKMVYKGHRNSRTMIKEANFWG--ANFVMSGSDCGHIFIWDRHTAEHLMLLEADN--HVV 764
Query: 675 SSME 678
+ ++
Sbjct: 765 NCLQ 768
>UNIPROTKB|Q5R9B8 [details] [associations]
symbol:DCAF6 "DDB1- and CUL4-associated factor 6"
species:9601 "Pongo abelii" [GO:0080008 "Cul4-RING ubiquitin ligase
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR000048
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50096 PROSITE:PS50294 SMART:SM00015 SMART:SM00320
UniPathway:UPA00143 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0016567 GO:GO:0080008
CTD:55827 HOVERGEN:HBG054871 KO:K11795 EMBL:CR858414 EMBL:CR859471
EMBL:CR860637 RefSeq:NP_001125965.1 RefSeq:NP_001128877.1
UniGene:Pab.18994 ProteinModelPortal:Q5R9B8 GeneID:100172900
KEGG:pon:100172900 InParanoid:Q5R9B8 Uniprot:Q5R9B8
Length = 860
Score = 264 (98.0 bits), Expect = 1.8e-34, Sum P(3) = 1.8e-34
Identities = 64/192 (33%), Positives = 97/192 (50%)
Query: 37 VRRLSQERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANV 96
++RL E L H GCVN I WN G ++SGSDDT + + + SRK+L +I +GH AN+
Sbjct: 38 IQRLKLEATLNVHDGCVNTICWNDTGEYILSGSDDTKLVISNPYSRKVLTTIRSGHRANI 97
Query: 97 FCTKFVPETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVE 156
F KF+P T+D+ +VS +GD + N+ + D + CH ++
Sbjct: 98 FSAKFLPCTNDKQIVSCSGDGVIFYTNVEQ-------DAETNRQCQFTCHYGTTYEIMTV 150
Query: 157 VGNPHVVWSASEDGTLRQHDFRQGSSCPPAGSSHQECRN-ILLDLRCGAKRSLADPPKQT 215
+P+ S EDGT+R D R +SC + ++C++ IL++ R A PP
Sbjct: 151 PNDPYTFLSCGEDGTVRWFDTRIKTSC-----TKEDCKDDILINCRRAATSVAICPPIPY 205
Query: 216 LSLKSCDISSTR 227
C SS R
Sbjct: 206 YLAVGCSDSSVR 217
Score = 137 (53.3 bits), Expect = 1.8e-34, Sum P(3) = 1.8e-34
Identities = 40/129 (31%), Positives = 61/129 (47%)
Query: 228 PHLLLVGGSDAFARLYDRRMLPP-LTSCQKRMSPPPCVNYFCPMHLSEHGRSSLHLTHVT 286
P+ L VG SD+ R+YDRRML T V F P HL+ S +T +
Sbjct: 204 PYYLAVGCSDSSVRIYDRRMLGTRATGNYAGRGTTGMVARFIPSHLNN---KSCRVTSLC 260
Query: 287 FSPNGEEVLLSYSGEHVYLMDVNHAGGRAMRYTVGDASKIMSFTPTLNGLELQPPIHDFL 346
+S +G+E+L+SYS +++YL D R ++ + + P + L L+ D+
Sbjct: 261 YSEDGQEILVSYSSDYIYLFDPKDDTARELKTPSAEERREELRQPPVKRLRLRG---DWS 317
Query: 347 QTNIRVRGE 355
T R R E
Sbjct: 318 DTGPRARPE 326
Score = 102 (41.0 bits), Expect = 1.8e-34, Sum P(3) = 1.8e-34
Identities = 23/64 (35%), Positives = 38/64 (59%)
Query: 615 MKQRYVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAGNVI 674
+K Y GH N T IK+A+F G +++ SGSD G FIW++ T + +L D +V+
Sbjct: 709 VKMVYKGHRNSRTMIKEANFWG--ANFVMSGSDCGHIFIWDRHTAEHLMLLEADN--HVV 764
Query: 675 SSME 678
+ ++
Sbjct: 765 NCLQ 768
>UNIPROTKB|F1MBJ1 [details] [associations]
symbol:DCAF6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0030374
"ligand-dependent nuclear receptor transcription coactivator
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR000048 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50096 PROSITE:PS50294
SMART:SM00015 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 GO:GO:0045944 GO:GO:0030374 GO:GO:0080008
GeneTree:ENSGT00530000062951 CTD:55827 KO:K11795 OMA:QTEAIGP
EMBL:DAAA02006734 EMBL:DAAA02006728 EMBL:DAAA02006729
EMBL:DAAA02006730 EMBL:DAAA02006731 EMBL:DAAA02006732
EMBL:DAAA02006733 IPI:IPI00697106 RefSeq:NP_001178158.1
UniGene:Bt.92050 ProteinModelPortal:F1MBJ1
Ensembl:ENSBTAT00000027930 GeneID:524645 KEGG:bta:524645
NextBio:20874004 ArrayExpress:F1MBJ1 Uniprot:F1MBJ1
Length = 877
Score = 264 (98.0 bits), Expect = 2.0e-34, Sum P(3) = 2.0e-34
Identities = 64/192 (33%), Positives = 97/192 (50%)
Query: 37 VRRLSQERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANV 96
++RL E L H GCVN I WN G ++SGSDDT + + + SRK+L +I +GH AN+
Sbjct: 38 IQRLKLEATLNVHDGCVNTICWNETGEYILSGSDDTKLVISNPYSRKVLTTIRSGHRANI 97
Query: 97 FCTKFVPETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVE 156
F KF+P T+D+ +VS +GD + N+ + D + CH ++
Sbjct: 98 FSAKFLPCTNDKQIVSCSGDGVIFYTNVEQ-------DAETNRQCQFTCHYGTTYEIMTV 150
Query: 157 VGNPHVVWSASEDGTLRQHDFRQGSSCPPAGSSHQECRN-ILLDLRCGAKRSLADPPKQT 215
+P+ S EDGT+R D R +SC + ++C++ IL++ R A PP
Sbjct: 151 PNDPYTFLSCGEDGTVRWFDTRIKTSC-----TKEDCKDDILINCRRAATSVAICPPIPY 205
Query: 216 LSLKSCDISSTR 227
C SS R
Sbjct: 206 YLAVGCSDSSVR 217
Score = 137 (53.3 bits), Expect = 2.0e-34, Sum P(3) = 2.0e-34
Identities = 40/129 (31%), Positives = 61/129 (47%)
Query: 228 PHLLLVGGSDAFARLYDRRMLPP-LTSCQKRMSPPPCVNYFCPMHLSEHGRSSLHLTHVT 286
P+ L VG SD+ R+YDRRML T V F P HL+ S +T +
Sbjct: 204 PYYLAVGCSDSSVRIYDRRMLGTRATGNYAGRGTTGMVARFIPSHLNN---KSCRVTSLC 260
Query: 287 FSPNGEEVLLSYSGEHVYLMDVNHAGGRAMRYTVGDASKIMSFTPTLNGLELQPPIHDFL 346
+S +G+E+L+SYS +++YL D R ++ + + P + L L+ D+
Sbjct: 261 YSEDGQEILVSYSSDYIYLFDPKDDTARELKTPSAEERREELRQPPVKRLRLRG---DWS 317
Query: 347 QTNIRVRGE 355
T R R E
Sbjct: 318 DTGPRARPE 326
Score = 102 (41.0 bits), Expect = 2.0e-34, Sum P(3) = 2.0e-34
Identities = 23/64 (35%), Positives = 38/64 (59%)
Query: 615 MKQRYVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAGNVI 674
+K Y GH N T IK+A+F G +++ SGSD G FIW++ T + +L D +V+
Sbjct: 726 VKMVYKGHRNSRTMIKEANFWG--ANFVMSGSDCGHIFIWDRHTAEHLMLLEADN--HVV 781
Query: 675 SSME 678
+ ++
Sbjct: 782 NCLQ 785
Score = 39 (18.8 bits), Expect = 2.8e-24, Sum P(3) = 2.8e-24
Identities = 8/23 (34%), Positives = 12/23 (52%)
Query: 271 HLSEHGRSSLHLTHVTFSPNGEE 293
HL+ S H T + SP+ E+
Sbjct: 422 HLASSSTESPHSTSLLSSPDSEQ 444
>UNIPROTKB|E2REY6 [details] [associations]
symbol:DCAF6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0030374
"ligand-dependent nuclear receptor transcription coactivator
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR000048 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50096 PROSITE:PS50294
SMART:SM00015 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 GO:GO:0045944 GO:GO:0030374 GO:GO:0080008
GeneTree:ENSGT00530000062951 CTD:55827 KO:K11795 OMA:QTEAIGP
EMBL:AAEX03005222 RefSeq:XP_537208.2 ProteinModelPortal:E2REY6
Ensembl:ENSCAFT00000024361 GeneID:480085 KEGG:cfa:480085
Uniprot:E2REY6
Length = 950
Score = 264 (98.0 bits), Expect = 2.9e-34, Sum P(3) = 2.9e-34
Identities = 64/192 (33%), Positives = 97/192 (50%)
Query: 37 VRRLSQERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANV 96
++RL E L H GCVN I WN G ++SGSDDT + + + SRK+L +I +GH AN+
Sbjct: 38 IQRLKLEATLNVHDGCVNTICWNETGEYILSGSDDTKLVISNPYSRKVLTTIRSGHRANI 97
Query: 97 FCTKFVPETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVE 156
F KF+P T+D+ +VS +GD + N+ + D + CH ++
Sbjct: 98 FSAKFLPCTNDKQIVSCSGDGVIFYTNVEQ-------DAETNRQCQFTCHYGTTYEIMTV 150
Query: 157 VGNPHVVWSASEDGTLRQHDFRQGSSCPPAGSSHQECRN-ILLDLRCGAKRSLADPPKQT 215
+P+ S EDGT+R D R +SC + ++C++ IL++ R A PP
Sbjct: 151 PNDPYTFLSCGEDGTVRWFDTRIKTSC-----TKEDCKDDILINCRRAATSVAICPPIPY 205
Query: 216 LSLKSCDISSTR 227
C SS R
Sbjct: 206 YLAVGCSDSSVR 217
Score = 137 (53.3 bits), Expect = 2.9e-34, Sum P(3) = 2.9e-34
Identities = 40/129 (31%), Positives = 61/129 (47%)
Query: 228 PHLLLVGGSDAFARLYDRRMLPP-LTSCQKRMSPPPCVNYFCPMHLSEHGRSSLHLTHVT 286
P+ L VG SD+ R+YDRRML T V F P HL+ S +T +
Sbjct: 204 PYYLAVGCSDSSVRIYDRRMLGTRATGNYAGRGTTGMVARFIPSHLNN---KSCRVTSLC 260
Query: 287 FSPNGEEVLLSYSGEHVYLMDVNHAGGRAMRYTVGDASKIMSFTPTLNGLELQPPIHDFL 346
+S +G+E+L+SYS +++YL D R ++ + + P + L L+ D+
Sbjct: 261 YSEDGQEILVSYSSDYIYLFDPKDDTARELKTPSAEERREELRQPPVKRLRLRG---DWS 317
Query: 347 QTNIRVRGE 355
T R R E
Sbjct: 318 DTGPRARPE 326
Score = 102 (41.0 bits), Expect = 2.9e-34, Sum P(3) = 2.9e-34
Identities = 23/64 (35%), Positives = 38/64 (59%)
Query: 615 MKQRYVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAGNVI 674
+K Y GH N T IK+A+F G +++ SGSD G FIW++ T + +L D +V+
Sbjct: 799 VKMVYKGHRNSRTMIKEANFWG--ANFVMSGSDCGHIFIWDRHTAEHLMLLEADN--HVV 854
Query: 675 SSME 678
+ ++
Sbjct: 855 NCLQ 858
Score = 42 (19.8 bits), Expect = 2.0e-24, Sum P(3) = 2.0e-24
Identities = 12/53 (22%), Positives = 21/53 (39%)
Query: 253 SCQKRMSPPPCVNYFCPMHLSEHGRSSLHLTHVTFSPNGEE-VLLSYSGEHVY 304
S ++ + P H + S H T + SP+ E+ + SG H +
Sbjct: 404 SAEQSLQPSTSSAMSAQAHSTSSSTESPHSTSLLSSPDNEQRQSVEASGRHTH 456
>RGD|1561961 [details] [associations]
symbol:Dcaf6 "DDB1 and CUL4 associated factor 6" species:10116
"Rattus norvegicus" [GO:0005634 "nucleus" evidence=IEA;ISO]
[GO:0030374 "ligand-dependent nuclear receptor transcription
coactivator activity" evidence=IEA;ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA;ISO] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR000048
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50096
PROSITE:PS50294 SMART:SM00015 SMART:SM00320 RGD:1561961
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0045944
GO:GO:0030374 GO:GO:0080008 GeneTree:ENSGT00530000062951 CTD:55827
KO:K11795 OMA:QTEAIGP OrthoDB:EOG4KPT96 EMBL:CH473958
IPI:IPI00957421 RefSeq:XP_213926.5 Ensembl:ENSRNOT00000004199
GeneID:289181 KEGG:rno:289181 UCSC:RGD:1561961 NextBio:629337
Uniprot:D4A8L4
Length = 851
Score = 263 (97.6 bits), Expect = 4.1e-34, Sum P(4) = 4.1e-34
Identities = 64/192 (33%), Positives = 96/192 (50%)
Query: 37 VRRLSQERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANV 96
++RL E L H GCVN I WN G ++SGSDDT + + + SRK+L +I +GH AN+
Sbjct: 38 IQRLKLEATLNVHDGCVNTICWNDTGEYILSGSDDTKLVISNPYSRKVLTTIRSGHRANI 97
Query: 97 FCTKFVPETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVE 156
F KF+P T D+ +VS +GD + N+ + D + CH ++
Sbjct: 98 FSAKFLPCTDDKQIVSCSGDGVIFYTNIEQ-------DAETNRQCQFTCHYGTTYEIMTV 150
Query: 157 VGNPHVVWSASEDGTLRQHDFRQGSSCPPAGSSHQECRN-ILLDLRCGAKRSLADPPKQT 215
+P+ S EDGT+R D R +SC + ++C++ IL++ R A PP
Sbjct: 151 PNDPYTFLSCGEDGTVRWFDTRIKTSC-----TKEDCKDDILINCRRAATSVAICPPVPY 205
Query: 216 LSLKSCDISSTR 227
C SS R
Sbjct: 206 HLAVGCSDSSVR 217
Score = 138 (53.6 bits), Expect = 4.1e-34, Sum P(4) = 4.1e-34
Identities = 41/129 (31%), Positives = 61/129 (47%)
Query: 228 PHLLLVGGSDAFARLYDRRMLPP-LTSCQKRMSPPPCVNYFCPMHLSEHGRSSLHLTHVT 286
P+ L VG SD+ R+YDRRML T V F P HLS S +T +
Sbjct: 204 PYHLAVGCSDSSVRIYDRRMLGTRATGNYAGRGTTGMVARFIPSHLSN---KSCRVTSLC 260
Query: 287 FSPNGEEVLLSYSGEHVYLMDVNHAGGRAMRYTVGDASKIMSFTPTLNGLELQPPIHDFL 346
+S +G+E+L+SYS +++YL D R ++ + + P + L L+ D+
Sbjct: 261 YSEDGQEILVSYSSDYIYLFDPKDDTARELKTPSAEERREELRQPPVKRLRLRG---DWS 317
Query: 347 QTNIRVRGE 355
T R R E
Sbjct: 318 DTGPRARPE 326
Score = 102 (41.0 bits), Expect = 4.1e-34, Sum P(4) = 4.1e-34
Identities = 23/64 (35%), Positives = 38/64 (59%)
Query: 615 MKQRYVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAGNVI 674
+K Y GH N T IK+A+F G +++ SGSD G FIW++ T + +L D +V+
Sbjct: 700 VKMVYKGHRNSRTMIKEANFWG--ANFVMSGSDCGHIFIWDRHTAEHLMLLEADN--HVV 755
Query: 675 SSME 678
+ ++
Sbjct: 756 NCLQ 759
Score = 37 (18.1 bits), Expect = 4.1e-34, Sum P(4) = 4.1e-34
Identities = 7/32 (21%), Positives = 12/32 (37%)
Query: 581 DSARETVDANXXXXXXXXXXQNDRIPYQPETV 612
++ RET + N +P Q E +
Sbjct: 596 ETDRETCEQTSTDSATRRASDNPELPSQTEAI 627
>TAIR|locus:2121164 [details] [associations]
symbol:AT4G38480 "AT4G38480" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002687 Gene3D:2.130.10.10 SUPFAM:SSF50978
KO:K11804 IPI:IPI00543482 RefSeq:NP_568042.1 UniGene:At.31171
ProteinModelPortal:F4JTP6 SMR:F4JTP6 EnsemblPlants:AT4G38480.1
GeneID:830004 KEGG:ath:AT4G38480 OMA:VAGMDEY Uniprot:F4JTP6
Length = 471
Score = 256 (95.2 bits), Expect = 4.1e-33, Sum P(3) = 4.1e-33
Identities = 58/176 (32%), Positives = 99/176 (56%)
Query: 5 PFHDGSIYDMLDTRHTDTRPDVNHSLQMHSS--LVRRLSQERELEGHQGCVNAISWNSKG 62
P D S+ ++ + R P+ + S + +S L+RRL +++L+ H+GCVN +S+N+ G
Sbjct: 9 PRTDHSVVNVWE-RELGLLPNRSFSNRFSASEDLLRRLGLDKKLDKHKGCVNTVSFNADG 67
Query: 63 SLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPETSDELVVSGAGDAEVRLF 122
+L+SGSDD + +W + + + S ++GH N+F KF+P + D +V+ A D +VR
Sbjct: 68 DILLSGSDDRQVILWDWQTASVKLSFDSGHFNNIFQAKFMPFSDDRTIVTSAADKQVRYS 127
Query: 123 NLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVEVGNPHVVWSASEDGTLRQHDFR 178
+ L+ + S L + H V KLAVE G+P ++ EDG ++ D R
Sbjct: 128 KI-------LESGQVETSLLGK-HQGPVHKLAVEPGSPFSFYTCGEDGAVKHFDLR 175
Score = 113 (44.8 bits), Expect = 4.1e-33, Sum P(3) = 4.1e-33
Identities = 27/76 (35%), Positives = 42/76 (55%)
Query: 606 PYQPETVIDMK---QRYVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLI 662
PY T + + Q Y H N T +K +F G + +Y+ SGSD GR FIW K+ G L+
Sbjct: 287 PYPSSTKTEERMTPQVYKEHTNRET-VKGVNFFGPKCEYVVSGSDCGRIFIWRKKDGELL 345
Query: 663 KMLLGDEAGNVISSME 678
+ + D +V++ +E
Sbjct: 346 RAMEADR--HVVNCIE 359
Score = 104 (41.7 bits), Expect = 4.1e-33, Sum P(3) = 4.1e-33
Identities = 30/88 (34%), Positives = 44/88 (50%)
Query: 218 LKSCDISSTRPHLLLVGGSDAFARLYDRRMLPPLTSCQKRMSPPPCVNYFCPMHLSEHGR 277
L + + P LL V G D +AR+YD R + + P +++FCP HL G
Sbjct: 196 LHAIAVDPRNPGLLAVAGMDEYARVYDIRSYR--SEGWYNFTQP--IDHFCPGHLI--GD 249
Query: 278 SSLHLTHVTFSPNGEEVLLSYSGEHVYL 305
+ +T + FS E +L SYS E +YL
Sbjct: 250 DHVGITGLAFSDQSE-LLASYSDEFIYL 276
>UNIPROTKB|Q5R448 [details] [associations]
symbol:DCAF8 "DDB1- and CUL4-associated factor 8"
species:9601 "Pongo abelii" [GO:0080008 "Cul4-RING ubiquitin ligase
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0016567 GO:GO:0080008
CTD:50717 HOVERGEN:HBG053807 KO:K11804 EMBL:CR861411
RefSeq:NP_001127032.1 UniGene:Pab.18321 ProteinModelPortal:Q5R448
GeneID:100174058 KEGG:pon:100174058 InParanoid:Q5R448
Uniprot:Q5R448
Length = 597
Score = 208 (78.3 bits), Expect = 7.8e-31, Sum P(3) = 7.8e-31
Identities = 52/143 (36%), Positives = 73/143 (51%)
Query: 37 VRRLSQERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANV 96
V+R + LEGH GCVN + +N +G+ L SGSDD + VW + R+ + E+GH +NV
Sbjct: 180 VQRFRLQHGLEGHTGCVNTLHFNQRGTWLASGSDDLKVVVWDWVRRQPVLDFESGHKSNV 239
Query: 97 FCTKFVPETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVE 156
F KF+P + D + A D +VR+ LS N + Q H KLA+E
Sbjct: 240 FQAKFLPNSGDSTLAMRARDGQVRVAELSATQ---CCKNT---KRVAQ-HKGASHKLALE 292
Query: 157 VGNPHVVWSASEDGTLRQHDFRQ 179
+P SA ED + D RQ
Sbjct: 293 PDSPCTFLSAGEDAVVFTIDLRQ 315
Score = 131 (51.2 bits), Expect = 7.8e-31, Sum P(3) = 7.8e-31
Identities = 32/113 (28%), Positives = 57/113 (50%)
Query: 201 RCGAKRSLADPPKQTLSLKSCDISSTRPHLLLVGGSDAFARLYDRRMLPPLTSCQKRMSP 260
R +K + ++ + L + ++ H VGG D F R+YD+R + +
Sbjct: 317 RPASKLVVTKEKEKKVGLYTIYVNPANTHQFAVGGRDQFVRIYDQRKIDENEN------- 369
Query: 261 PPCVNYFCPMHLSEHGRSSLHLTHVTFSPNGEEVLLSYSGEHVYLMDVNHAGG 313
+ FCP HL +G S ++T + +S +G E+L SY+ E +YL + +H+ G
Sbjct: 370 NGVLKKFCPHHLV-NGESKANITCLVYSHDGTELLASYNDEDIYLFNSSHSDG 421
Score = 126 (49.4 bits), Expect = 7.8e-31, Sum P(3) = 7.8e-31
Identities = 24/62 (38%), Positives = 41/62 (66%)
Query: 617 QRYVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAGNVISS 676
+RY GH N T +K +F G + +++ SGSD G F+WEK + ++I+ + GD+ G V++
Sbjct: 426 KRYKGHRNNAT-VKGVNFYGPKSEFVVSGSDCGHIFLWEKSSCQIIQFMEGDKGG-VVNC 483
Query: 677 ME 678
+E
Sbjct: 484 LE 485
>WB|WBGene00044440 [details] [associations]
symbol:adpr-1 species:6239 "Caenorhabditis elegans"
[GO:0019915 "lipid storage" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR011990 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0019915 Gene3D:1.25.40.10
EMBL:FO081821 GeneTree:ENSGT00530000062951 KO:K11807 OMA:HRYCGHC
RefSeq:NP_001021829.1 UniGene:Cel.29679 ProteinModelPortal:Q4W5Q8
SMR:Q4W5Q8 PaxDb:Q4W5Q8 EnsemblMetazoa:Y73E7A.9 GeneID:3565128
KEGG:cel:CELE_Y73E7A.9 UCSC:Y73E7A.9 CTD:3565128 WormBase:Y73E7A.9
eggNOG:NOG288984 HOGENOM:HOG000022238 InParanoid:Q4W5Q8
NextBio:955287 Uniprot:Q4W5Q8
Length = 558
Score = 214 (80.4 bits), Expect = 2.4e-30, Sum P(3) = 2.4e-30
Identities = 50/144 (34%), Positives = 78/144 (54%)
Query: 36 LVRRLSQERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSAN 95
LV L LEGH GCVN + WN G+LL SGSDD ++ +W S R++ H++ TGH N
Sbjct: 27 LVDSLESFHMLEGHSGCVNTLRWNKTGALLASGSDDRNVKIWK-SGREI-HNLVTGHEGN 84
Query: 96 VFCTKFVPETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAV 155
VF +F+ + D+ +V+GA D V L ++ + + + + RVK++
Sbjct: 85 VFAVEFLQNSGDQKLVTGAADRVVALHDIEASTCKKWELDG------------RVKRICT 132
Query: 156 EVGNPHVVWSASE-DGTLRQHDFR 178
+P + W+A E D ++Q D R
Sbjct: 133 VEHDPTLFWAAVECDNGVQQFDTR 156
Score = 143 (55.4 bits), Expect = 2.4e-30, Sum P(3) = 2.4e-30
Identities = 29/69 (42%), Positives = 41/69 (59%)
Query: 602 NDRIPY-QPETVIDMKQRYVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGR 660
NDR PE V+D ++RY G N TDIK+A+F G R YI +GSD G +IW + T +
Sbjct: 412 NDRPELVAPEGVVDYQERYGGSTNHQTDIKEANFFGSRDQYIIAGSDCGHMYIWNRDTSK 471
Query: 661 LIKMLLGDE 669
+ + D+
Sbjct: 472 IQGIFEADD 480
Score = 101 (40.6 bits), Expect = 2.4e-30, Sum P(3) = 2.4e-30
Identities = 32/94 (34%), Positives = 48/94 (51%)
Query: 219 KSCDISSTRPHLLLVGGSDAFARLYDRRML--PPLTSCQKRMSPPPCVNYFCPMHLSEHG 276
KS +S RP+L++VG + RLYDRR L P LT F P+ + +
Sbjct: 176 KSVAVSEARPNLIVVGFDETAVRLYDRRNLNAPMLT--------------FSPLGANTY- 220
Query: 277 RSSLHLTHVTFSPNGEEVLLSYSGEH-VYLMDVN 309
+ H THV F+ G EV++++ G VY+ V+
Sbjct: 221 --AYHATHVAFNKRGTEVVVNHGGGGGVYVFSVD 252
Score = 68 (29.0 bits), Expect = 6.2e-27, Sum P(3) = 6.2e-27
Identities = 53/222 (23%), Positives = 85/222 (38%)
Query: 275 HGRSSLHLTHVTFSPNGEEVLLSYSGEHVYLMDVNHAGGRAMRYTVGDASKIMSFTPTLN 334
+ R +L+ +TFSP G +Y HV N G + G + F+
Sbjct: 200 YDRRNLNAPMLTFSPLGANTY-AYHATHVAF---NKRGTEVV-VNHGGGGGVYVFSVDA- 253
Query: 335 GLELQPPIHDFLQTNIRVRGE--VATGLGKCRMLVEIARNSLEEGKHPYYGIEACNEVL- 391
EL P D + + + E + +G L EI ++ E KH I+ ++++
Sbjct: 254 --ELDPKYMDRFHSVMELPREPVITSGALPYPDLREIGSTAIRE-KHFAKAIDFYSDLIY 310
Query: 392 -----EGHLSGIGPMLRHECLCIRAALLLKRKWKNDAQMAIRDCYNARRIDSSSFRAHLY 446
E H + C RA LL R+ + D +RDC A I H
Sbjct: 311 RNDDRESHQDHRAFL--SVCHSNRATALLLRRQRGDTYACVRDCIKALEI-------HRG 361
Query: 447 MSEALEQLCKYKEALD-FAIAAQCLDP-----SNSVMAEKVE 482
S+AL +L K ++ +A +C+ N EK+E
Sbjct: 362 NSKALLRLIKSFTTMEHIGLARKCVQKFKEWYPNDTAIEKME 403
Score = 38 (18.4 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 20/76 (26%), Positives = 30/76 (39%)
Query: 102 VPETSDELVVSGAGDAEVRLF---NLSR--FSGRGLDDNAITPSALYQCHTRRVKKLAVE 156
V E L+V G + VRL+ NL+ + L N A + +R ++ V
Sbjct: 180 VSEARPNLIVVGFDETAVRLYDRRNLNAPMLTFSPLGANTYAYHATHVAFNKRGTEVVVN 239
Query: 157 VGNPHVVWSASEDGTL 172
G V+ S D L
Sbjct: 240 HGGGGGVYVFSVDAEL 255
>RGD|1308513 [details] [associations]
symbol:Dcaf8 "DDB1 and CUL4 associated factor 8" species:10116
"Rattus norvegicus" [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISO;ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 UniPathway:UPA00143 RGD:1308513 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319 GO:GO:0016567
GO:GO:0080008 GeneTree:ENSGT00530000062951 CTD:50717
HOVERGEN:HBG053807 KO:K11804 OrthoDB:EOG47H5PN HOGENOM:HOG000243561
OMA:EQPRRRV EMBL:BC085957 IPI:IPI00192480 RefSeq:NP_001014253.1
UniGene:Rn.203073 ProteinModelPortal:Q5U2M6 PhosphoSite:Q5U2M6
PRIDE:Q5U2M6 Ensembl:ENSRNOT00000008944 GeneID:364050
KEGG:rno:364050 UCSC:RGD:1308513 InParanoid:Q5U2M6 NextBio:684737
Genevestigator:Q5U2M6 Uniprot:Q5U2M6
Length = 591
Score = 207 (77.9 bits), Expect = 4.0e-30, Sum P(3) = 4.0e-30
Identities = 52/143 (36%), Positives = 73/143 (51%)
Query: 37 VRRLSQERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANV 96
V+R + LEGH GCVN + +N +G+ L SGSDD + VW + R+ + E+GH +NV
Sbjct: 174 VQRFRLQHGLEGHTGCVNTLHFNQRGTWLASGSDDLKVVVWDWVRRQPVLDFESGHKSNV 233
Query: 97 FCTKFVPETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVE 156
F KF+P + D + A D +VR+ LS N + Q H KLA+E
Sbjct: 234 FQAKFLPNSGDSTLAMCARDGQVRVAELSATQ---CCKNT---KRVAQ-HKGASHKLALE 286
Query: 157 VGNPHVVWSASEDGTLRQHDFRQ 179
+P SA ED + D RQ
Sbjct: 287 PDSPCTFLSAGEDAVVFTIDLRQ 309
Score = 126 (49.4 bits), Expect = 4.0e-30, Sum P(3) = 4.0e-30
Identities = 24/62 (38%), Positives = 41/62 (66%)
Query: 617 QRYVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAGNVISS 676
+RY GH N T +K +F G + +++ SGSD G F+WEK + ++I+ + GD+ G V++
Sbjct: 420 KRYKGHRNNAT-VKGVNFYGPKSEFVVSGSDCGHIFLWEKSSCQIIQFMEGDKGG-VVNC 477
Query: 677 ME 678
+E
Sbjct: 478 LE 479
Score = 125 (49.1 bits), Expect = 4.0e-30, Sum P(3) = 4.0e-30
Identities = 31/113 (27%), Positives = 56/113 (49%)
Query: 201 RCGAKRSLADPPKQTLSLKSCDISSTRPHLLLVGGSDAFARLYDRRMLPPLTSCQKRMSP 260
R +K + ++ + L + ++ H VGG D F R+YD+R + +
Sbjct: 311 RPASKLVVTKEKEKKVGLYTIYVNPANTHQFAVGGRDQFVRIYDQRKIDENEN------- 363
Query: 261 PPCVNYFCPMHLSEHGRSSLHLTHVTFSPNGEEVLLSYSGEHVYLMDVNHAGG 313
+ FCP HL + S ++T + +S +G E+L SY+ E +YL + +H+ G
Sbjct: 364 NGVLKKFCPHHLV-NSESKANITCLVYSHDGTELLASYNDEDIYLFNSSHSDG 415
>UNIPROTKB|Q5TAQ9 [details] [associations]
symbol:DCAF8 "DDB1- and CUL4-associated factor 8"
species:9606 "Homo sapiens" [GO:0016567 "protein ubiquitination"
evidence=IEA;IC] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
UniPathway:UPA00143 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 eggNOG:COG2319 GO:GO:0016567 EMBL:CH471121
GO:GO:0080008 EMBL:U06631 EMBL:AK223475 EMBL:CR749801 EMBL:AL139011
EMBL:BC013107 EMBL:BC080597 EMBL:BC098271 EMBL:BC099709
EMBL:BC099846 EMBL:BC111063 IPI:IPI00290071 IPI:IPI00854775
RefSeq:NP_056541.2 UniGene:Hs.632447 PDB:3I8E PDBsum:3I8E
ProteinModelPortal:Q5TAQ9 SMR:Q5TAQ9 DIP:DIP-48762N IntAct:Q5TAQ9
MINT:MINT-1446617 STRING:Q5TAQ9 PhosphoSite:Q5TAQ9 DMDM:74756455
PaxDb:Q5TAQ9 PRIDE:Q5TAQ9 Ensembl:ENST00000326837
Ensembl:ENST00000368073 Ensembl:ENST00000368074 GeneID:50717
KEGG:hsa:50717 UCSC:uc001fvn.2 UCSC:uc001fvp.4 CTD:50717
GeneCards:GC01M160185 H-InvDB:HIX0200230 HGNC:HGNC:24891
HPA:HPA027218 HPA:HPA027381 neXtProt:NX_Q5TAQ9 PharmGKB:PA165751195
HOVERGEN:HBG053807 InParanoid:Q5TAQ9 KO:K11804 OrthoDB:EOG47H5PN
PhylomeDB:Q5TAQ9 ChiTaRS:DCAF8 EvolutionaryTrace:Q5TAQ9
GenomeRNAi:50717 NextBio:53224 ArrayExpress:Q5TAQ9 Bgee:Q5TAQ9
CleanEx:HS_WDR42A Genevestigator:Q5TAQ9 Uniprot:Q5TAQ9
Length = 597
Score = 207 (77.9 bits), Expect = 4.2e-30, Sum P(3) = 4.2e-30
Identities = 52/143 (36%), Positives = 73/143 (51%)
Query: 37 VRRLSQERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANV 96
V+R + LEGH GCVN + +N +G+ L SGSDD + VW + R+ + E+GH +NV
Sbjct: 180 VQRFRLQHGLEGHTGCVNTLHFNQRGTWLASGSDDLKVVVWDWVRRQPVLDFESGHKSNV 239
Query: 97 FCTKFVPETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVE 156
F KF+P + D + A D +VR+ LS N + Q H KLA+E
Sbjct: 240 FQAKFLPNSGDSTLAMCARDGQVRVAELSATQ---CCKNT---KRVAQ-HKGASHKLALE 292
Query: 157 VGNPHVVWSASEDGTLRQHDFRQ 179
+P SA ED + D RQ
Sbjct: 293 PDSPCTFLSAGEDAVVFTIDLRQ 315
Score = 126 (49.4 bits), Expect = 4.2e-30, Sum P(3) = 4.2e-30
Identities = 24/62 (38%), Positives = 41/62 (66%)
Query: 617 QRYVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAGNVISS 676
+RY GH N T +K +F G + +++ SGSD G F+WEK + ++I+ + GD+ G V++
Sbjct: 426 KRYKGHRNNAT-VKGVNFYGPKSEFVVSGSDCGHIFLWEKSSCQIIQFMEGDKGG-VVNC 483
Query: 677 ME 678
+E
Sbjct: 484 LE 485
Score = 125 (49.1 bits), Expect = 4.2e-30, Sum P(3) = 4.2e-30
Identities = 31/113 (27%), Positives = 56/113 (49%)
Query: 201 RCGAKRSLADPPKQTLSLKSCDISSTRPHLLLVGGSDAFARLYDRRMLPPLTSCQKRMSP 260
R +K + ++ + L + ++ H VGG D F R+YD+R + +
Sbjct: 317 RPASKLVVTKEKEKKVGLYTIYVNPANTHQFAVGGRDQFVRIYDQRKIDENEN------- 369
Query: 261 PPCVNYFCPMHLSEHGRSSLHLTHVTFSPNGEEVLLSYSGEHVYLMDVNHAGG 313
+ FCP HL + S ++T + +S +G E+L SY+ E +YL + +H+ G
Sbjct: 370 NGVLKKFCPHHLV-NSESKANITCLVYSHDGTELLASYNDEDIYLFNSSHSDG 421
>MGI|MGI:91860 [details] [associations]
symbol:Dcaf8 "DDB1 and CUL4 associated factor 8" species:10090
"Mus musculus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] [GO:0080008
"Cul4-RING ubiquitin ligase complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
UniPathway:UPA00143 MGI:MGI:91860 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319 GO:GO:0016567
GO:GO:0080008 GeneTree:ENSGT00530000062951 CTD:50717
HOVERGEN:HBG053807 KO:K11804 OrthoDB:EOG47H5PN ChiTaRS:DCAF8
EMBL:AK098114 EMBL:AK146825 EMBL:BC023704 EMBL:BC023804
IPI:IPI00229856 IPI:IPI00407739 RefSeq:NP_705783.1
UniGene:Mm.159915 ProteinModelPortal:Q8N7N5 SMR:Q8N7N5
PhosphoSite:Q8N7N5 PaxDb:Q8N7N5 PRIDE:Q8N7N5
Ensembl:ENSMUST00000074144 GeneID:98193 KEGG:mmu:98193
UCSC:uc007dpr.2 UCSC:uc007dps.2 HOGENOM:HOG000243561
InParanoid:Q8N7N5 OMA:EQPRRRV NextBio:353348 Bgee:Q8N7N5
CleanEx:MM_WDR42A Genevestigator:Q8N7N5 Uniprot:Q8N7N5
Length = 591
Score = 207 (77.9 bits), Expect = 8.2e-30, Sum P(3) = 8.2e-30
Identities = 52/143 (36%), Positives = 73/143 (51%)
Query: 37 VRRLSQERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANV 96
V+R + LEGH GCVN + +N +G+ L SGSDD + VW + R+ + E+GH +NV
Sbjct: 174 VQRFRLQHGLEGHTGCVNTLHFNQRGTWLASGSDDLKVVVWDWVRRQPVLDFESGHKSNV 233
Query: 97 FCTKFVPETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVE 156
F KF+P + D + A D +VR+ LS N + Q H KLA+E
Sbjct: 234 FQAKFLPNSGDSTLAMCARDGQVRVAELSATQ---CCKNT---KRVAQ-HKGASHKLALE 286
Query: 157 VGNPHVVWSASEDGTLRQHDFRQ 179
+P SA ED + D RQ
Sbjct: 287 PDSPCTFLSAGEDAVVFTIDLRQ 309
Score = 126 (49.4 bits), Expect = 8.2e-30, Sum P(3) = 8.2e-30
Identities = 24/62 (38%), Positives = 41/62 (66%)
Query: 617 QRYVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAGNVISS 676
+RY GH N T +K +F G + +++ SGSD G F+WEK + ++I+ + GD+ G V++
Sbjct: 420 KRYKGHRNNAT-VKGVNFYGPKSEFVVSGSDCGHIFLWEKSSCQIIQFMEGDKGG-VVNC 477
Query: 677 ME 678
+E
Sbjct: 478 LE 479
Score = 122 (48.0 bits), Expect = 8.2e-30, Sum P(3) = 8.2e-30
Identities = 30/113 (26%), Positives = 56/113 (49%)
Query: 201 RCGAKRSLADPPKQTLSLKSCDISSTRPHLLLVGGSDAFARLYDRRMLPPLTSCQKRMSP 260
R +K + ++ + L + ++ H VGG D + R+YD+R + +
Sbjct: 311 RPASKLVVTKEKEKKVGLYTIYVNPANTHQFAVGGRDQYVRIYDQRKIDENEN------- 363
Query: 261 PPCVNYFCPMHLSEHGRSSLHLTHVTFSPNGEEVLLSYSGEHVYLMDVNHAGG 313
+ FCP HL + S ++T + +S +G E+L SY+ E +YL + +H+ G
Sbjct: 364 NGVLKKFCPHHLV-NSESKANITCLVYSHDGTELLASYNDEDIYLFNSSHSDG 415
>UNIPROTKB|G3V3G9 [details] [associations]
symbol:DCAF8 "DDB1- and CUL4-associated factor 8"
species:9606 "Homo sapiens" [GO:0005777 "peroxisome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006708
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04614 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005777 Gene3D:2.130.10.10
SUPFAM:SSF50978 EMBL:AL139011 HGNC:HGNC:24891 ChiTaRS:DCAF8
OMA:EQPRRRV Ensembl:ENST00000555195 Ensembl:ENST00000556710
Uniprot:G3V3G9
Length = 751
Score = 207 (77.9 bits), Expect = 1.4e-29, Sum P(3) = 1.4e-29
Identities = 52/143 (36%), Positives = 73/143 (51%)
Query: 37 VRRLSQERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANV 96
V+R + LEGH GCVN + +N +G+ L SGSDD + VW + R+ + E+GH +NV
Sbjct: 334 VQRFRLQHGLEGHTGCVNTLHFNQRGTWLASGSDDLKVVVWDWVRRQPVLDFESGHKSNV 393
Query: 97 FCTKFVPETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVE 156
F KF+P + D + A D +VR+ LS N + Q H KLA+E
Sbjct: 394 FQAKFLPNSGDSTLAMCARDGQVRVAELSATQ---CCKNT---KRVAQ-HKGASHKLALE 446
Query: 157 VGNPHVVWSASEDGTLRQHDFRQ 179
+P SA ED + D RQ
Sbjct: 447 PDSPCTFLSAGEDAVVFTIDLRQ 469
Score = 126 (49.4 bits), Expect = 1.4e-29, Sum P(3) = 1.4e-29
Identities = 24/62 (38%), Positives = 41/62 (66%)
Query: 617 QRYVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAGNVISS 676
+RY GH N T +K +F G + +++ SGSD G F+WEK + ++I+ + GD+ G V++
Sbjct: 580 KRYKGHRNNAT-VKGVNFYGPKSEFVVSGSDCGHIFLWEKSSCQIIQFMEGDKGG-VVNC 637
Query: 677 ME 678
+E
Sbjct: 638 LE 639
Score = 125 (49.1 bits), Expect = 1.4e-29, Sum P(3) = 1.4e-29
Identities = 31/113 (27%), Positives = 56/113 (49%)
Query: 201 RCGAKRSLADPPKQTLSLKSCDISSTRPHLLLVGGSDAFARLYDRRMLPPLTSCQKRMSP 260
R +K + ++ + L + ++ H VGG D F R+YD+R + +
Sbjct: 471 RPASKLVVTKEKEKKVGLYTIYVNPANTHQFAVGGRDQFVRIYDQRKIDENEN------- 523
Query: 261 PPCVNYFCPMHLSEHGRSSLHLTHVTFSPNGEEVLLSYSGEHVYLMDVNHAGG 313
+ FCP HL + S ++T + +S +G E+L SY+ E +YL + +H+ G
Sbjct: 524 NGVLKKFCPHHLV-NSESKANITCLVYSHDGTELLASYNDEDIYLFNSSHSDG 575
>DICTYBASE|DDB_G0269686 [details] [associations]
symbol:DDB_G0269686 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0269686 EMBL:AAFI02000005 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 KO:K11795 RefSeq:XP_646188.1
ProteinModelPortal:Q55DE3 EnsemblProtists:DDB0238180 GeneID:8617141
KEGG:ddi:DDB_G0269686 OMA:ECVNSIN ProtClustDB:CLSZ2729295
Uniprot:Q55DE3
Length = 895
Score = 236 (88.1 bits), Expect = 3.0e-29, Sum P(4) = 3.0e-29
Identities = 62/182 (34%), Positives = 101/182 (55%)
Query: 42 QERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKF 101
++ EL GH CVN+I++N GSL++SG DD + +W RK L ++ GHS NVF T F
Sbjct: 39 EKTELHGHNECVNSINFNDDGSLIVSGGDDETVRIWDVGKRKCLTTLY-GHSTNVFATNF 97
Query: 102 VPETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVEVGNPH 161
+ + V+SG DA++R +++ ++ T +Y+ H+++V KL+V P
Sbjct: 98 L-NNDNRKVISGGNDADIRYYDI--------ENQKCT---VYKHHSKKVLKLSVCPTQPQ 145
Query: 162 VVWSASEDGTLRQHDFR---QGSSCPP---AGSSHQECRNILLDLRCGAK-RSLADPPKQ 214
V S+S DG++R D R + + P A S++ R IL + G + R++A P +Q
Sbjct: 146 VFLSSSSDGSVRLFDVRLKYKDTEIQPIQTAPSNNDGYRAILPQVIGGGRGRTMALPLQQ 205
Query: 215 TL 216
L
Sbjct: 206 QL 207
Score = 139 (54.0 bits), Expect = 3.0e-29, Sum P(4) = 3.0e-29
Identities = 27/70 (38%), Positives = 45/70 (64%)
Query: 601 QNDRIPYQPETVIDMKQRYVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGR 660
+N+ P+ P+T KQ Y GH + T IK +F G +YI SGSDD + FIW+K++ +
Sbjct: 758 KNNSKPFLPKT---FKQVYSGHVSEQT-IKSVNFYGPNSEYIVSGSDDSKLFIWDKESAK 813
Query: 661 LIKMLLGDEA 670
++++L G ++
Sbjct: 814 IVRILEGHDS 823
Score = 82 (33.9 bits), Expect = 3.0e-29, Sum P(4) = 3.0e-29
Identities = 30/111 (27%), Positives = 51/111 (45%)
Query: 198 LDLRCGAKRSLADPPKQTLSLKSCDISSTRPHLLLVGGSDAFARLYDRRMLPPLTSCQKR 257
L LR + S++ P K T+ S + + + SD RL+D+RM+P
Sbjct: 255 LPLRRSFRYSISIP-KTTIF--SVEYHPFDGYSFITASSDGTVRLFDQRMIP-------N 304
Query: 258 MSPPPCVNYFCPMHLSEHGRSSLHLTHVTFSPNGEEVLLSYSGEHVYLMDV 308
S VN + ++ S T FS NG E++++Y +++YL D+
Sbjct: 305 HSSESFVNIY--RNIEVPFPSEDEATGCAFSKNGNEIVVTYLNDNIYLYDL 353
Score = 55 (24.4 bits), Expect = 6.2e-06, Sum P(3) = 6.2e-06
Identities = 16/49 (32%), Positives = 22/49 (44%)
Query: 213 KQTLSLKSCDISSTRPHLLLVGGSDAFARLYDRRMLPPLTSCQKRMSPP 261
K+ L L C T+P + L SD RL+D R+ T Q + P
Sbjct: 132 KKVLKLSVCP---TQPQVFLSSSSDGSVRLFDVRLKYKDTEIQPIQTAP 177
Score = 40 (19.1 bits), Expect = 3.0e-29, Sum P(4) = 3.0e-29
Identities = 9/25 (36%), Positives = 16/25 (64%)
Query: 416 KRKWKNDAQMAIRDCYNARRIDSSS 440
K+K K D+ +++ C N+ I SS+
Sbjct: 486 KKKAKTDSDISLSSCSNSS-IGSSN 509
Score = 37 (18.1 bits), Expect = 0.00037, Sum P(3) = 0.00037
Identities = 8/14 (57%), Positives = 10/14 (71%)
Query: 165 SASEDGTLRQHDFR 178
+AS DGT+R D R
Sbjct: 287 TASSDGTVRLFDQR 300
Score = 37 (18.1 bits), Expect = 0.00037, Sum P(3) = 0.00037
Identities = 7/14 (50%), Positives = 10/14 (71%)
Query: 231 LLVGGSDAFARLYD 244
++ GG+DA R YD
Sbjct: 105 VISGGNDADIRYYD 118
>ASPGD|ASPL0000058488 [details] [associations]
symbol:AN0287 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005829 "cytosol"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 EMBL:BN001308 OMA:GHITACK
EnsemblFungi:CADANIAT00002433 Uniprot:C8VUB4
Length = 1089
Score = 228 (85.3 bits), Expect = 1.3e-27, Sum P(3) = 1.3e-27
Identities = 54/152 (35%), Positives = 82/152 (53%)
Query: 10 SIYDMLDTRHT---DTRPDVNHSLQMHSSLVRRLSQERELEGHQGCVNAISWNSKGSLLI 66
S+YD + R T+ ++ + V L EL GH GCVNA+SW+ G LL
Sbjct: 4 SLYDRIWLREAGGGSTKANIR-GIYGSKEWVNDLDIVNELGGHTGCVNALSWSRSGRLLA 62
Query: 67 SGSDDTHINVWSY---SSRK---LLHSIETGHSANVFCTKFVPETSDELVVSGAGDAEVR 120
SGSDD H+N++SY SS L S+ TGH+ N+F F+P ++D+ +V+ AGD++VR
Sbjct: 63 SGSDDFHLNIYSYQPDSSTAPFALNTSVFTGHTGNIFSVAFMPHSNDQTLVTAAGDSQVR 122
Query: 121 LFNLSRFSGRGLDDNAITPSALYQCHTRRVKK 152
+F++ S R I P+ Q + +
Sbjct: 123 VFDIEYSSSRN-GSQGIPPAFANQARNPHLNR 153
Score = 149 (57.5 bits), Expect = 1.3e-27, Sum P(3) = 1.3e-27
Identities = 29/57 (50%), Positives = 38/57 (66%)
Query: 619 YVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGD-EAGNVI 674
Y GHCNV T +K A+F G +Y+ SGSD G FIWE+ T +L+ +L GD E NV+
Sbjct: 915 YRGHCNVKT-VKDANFFGLNDEYVVSGSDSGHLFIWERDTCKLVNILKGDDEVVNVV 970
Score = 133 (51.9 bits), Expect = 3.6e-15, Sum P(2) = 3.6e-15
Identities = 56/206 (27%), Positives = 93/206 (45%)
Query: 120 RLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVEVGNPHVVWSASEDGTLRQHDFRQ 179
R F +R+ G G N T + +Y+ H RVK++ E +P++ + SEDG +RQ D R
Sbjct: 153 RFFGNTRYLGVG---N--TNARIYRSHADRVKRIVTE-SSPYLFLTCSEDGEVRQWDLRL 206
Query: 180 GSSCPPAGSSHQECRNILLDLRCGAKR--SLADPP-----KQTLSLKSCDISSTRPHLLL 232
SS P + + R G S PP + + L + S ++PH +
Sbjct: 207 PSSAYPKPRGGL----LYMTQRVGEGHDDSNVPPPLISYKRHRIDLNTISCSPSQPHYIA 262
Query: 233 VGGSDAFARLYDRRMLP-PLTSCQKRMSPPPCVNYFCPMHLSEHGRSSLHLTHVTFSPNG 291
+GG+ L+DRRML +T+ + P + L G+++ + F+PNG
Sbjct: 263 LGGAHLHCFLHDRRMLGRDMTAERGDPGTSPGIGSGYDEELM--GQATRCVRR--FAPNG 318
Query: 292 EEVLLS-YSGEHVYLMDVNHAGGRAM 316
+ S Y G H+ +++A M
Sbjct: 319 KTRTKSRYKG-HITACKISNANPNEM 343
Score = 67 (28.6 bits), Expect = 1.3e-27, Sum P(3) = 1.3e-27
Identities = 16/48 (33%), Positives = 25/48 (52%)
Query: 263 CVNYFCPMHLSE-HGRSSLHLTHVTFS-PNGEEVLLSYSGEHVYLMDV 308
CV F P + R H+T S N E+++S+SG+H+Y D+
Sbjct: 310 CVRRFAPNGKTRTKSRYKGHITACKISNANPNEMIVSWSGDHIYSFDL 357
Score = 54 (24.1 bits), Expect = 1.4e-06, Sum P(3) = 1.4e-06
Identities = 35/157 (22%), Positives = 61/157 (38%)
Query: 121 LFNLSRFSGRGLDDNAITPSAL-YQCHTRRVKKLAVEVGNPHVVWSASEDGTLRQHDFRQ 179
L +++ G G DD+ + P + Y+ H + ++ PH + HD R
Sbjct: 218 LLYMTQRVGEGHDDSNVPPPLISYKRHRIDLNTISCSPSQPHYIALGGAHLHCFLHDRRM 277
Query: 180 ------------GSSCPPAGSSHQECRNILLDLRCGAKRSLADPPKQTLS-----LKSCD 222
G+S P GS + E + RC +R + +T S + +C
Sbjct: 278 LGRDMTAERGDPGTS-PGIGSGYDE-ELMGQATRC-VRRFAPNGKTRTKSRYKGHITACK 334
Query: 223 ISSTRPHLLLVGGSDAFARLYDRRMLPPLTSCQKRMS 259
IS+ P+ ++V S +D P S Q++ S
Sbjct: 335 ISNANPNEMIVSWSGDHIYSFDLVRSPDALSTQEQQS 371
Score = 40 (19.1 bits), Expect = 7.0e-08, Sum P(3) = 7.0e-08
Identities = 30/124 (24%), Positives = 54/124 (43%)
Query: 4 FPFHDGSIYDMLDTRHTDTRPDVNHSLQMHSSLVRRLSQE--RELEGHQGCVNAISWNSK 61
F H G+I+ + H++ + V + S VR E G QG A + ++
Sbjct: 91 FTGHTGNIFSVAFMPHSNDQTLVTAA---GDSQVRVFDIEYSSSRNGSQGIPPAFANQAR 147
Query: 62 GSLLISGSDDT-HINVWSYSSRKLLHSIETGHSANVFCTKFVPETSDELVVSGAGDAEVR 120
L +T ++ V + ++R I H+ V + V E+S L ++ + D EVR
Sbjct: 148 NPHLNRFFGNTRYLGVGNTNAR-----IYRSHADRV--KRIVTESSPYLFLTCSEDGEVR 200
Query: 121 LFNL 124
++L
Sbjct: 201 QWDL 204
>TAIR|locus:2132796 [details] [associations]
symbol:AT4G35140 "AT4G35140" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:CP002687 GenomeReviews:CT486007_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 KO:K11804 HOGENOM:HOG000243561 EMBL:AY120722
EMBL:BT000028 IPI:IPI00525689 RefSeq:NP_195240.2 UniGene:At.44855
ProteinModelPortal:Q8L862 SMR:Q8L862 PRIDE:Q8L862
EnsemblPlants:AT4G35140.1 GeneID:829666 KEGG:ath:AT4G35140
TAIR:At4g35140 eggNOG:NOG257676 InParanoid:Q8L862 OMA:IDPRNSN
PhylomeDB:Q8L862 ProtClustDB:CLSN2684761 Genevestigator:Q8L862
Uniprot:Q8L862
Length = 496
Score = 255 (94.8 bits), Expect = 3.0e-27, Sum P(2) = 3.0e-27
Identities = 54/144 (37%), Positives = 85/144 (59%)
Query: 35 SLVRRLSQERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSA 94
+LV RL ++LE H+GCVN +S+N++G +LISGSDD + +W + + S +GH+
Sbjct: 44 NLVLRLEIYKKLEKHKGCVNTVSFNAEGDVLISGSDDRRVVLWDWQLGNVKLSFHSGHAN 103
Query: 95 NVFCTKFVPETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLA 154
NVF KF+P + D +V+ A D VR ++ L+ + + S L H R KL
Sbjct: 104 NVFQAKFMPFSDDRTIVTCAADGMVRRASI-------LEGDKVETSFL-GLHQGRAHKLC 155
Query: 155 VEVGNPHVVWSASEDGTLRQHDFR 178
+E GNPH+ ++ EDG +++ D R
Sbjct: 156 IEPGNPHIFYTCGEDGLVQRFDLR 179
Score = 158 (60.7 bits), Expect = 2.8e-16, Sum P(2) = 2.8e-16
Identities = 50/161 (31%), Positives = 80/161 (49%)
Query: 146 HTRRVKKLAVEVGNPHVVWSASEDGTLRQHDFRQGSSCPPAGSSHQECRNILLDLRCGAK 205
H R KL +E GNPH+ ++ EDG +++ D R + P + CR++ D R +
Sbjct: 147 HQGRAHKLCIEPGNPHIFYTCGEDGLVQRFDLR--TEAP---TELFTCRSV--DPR---R 196
Query: 206 RSLADPPKQTLSLKSCDISSTRPHLLLVGGSDAFARLYD-RRMLPPLTSCQKRMSPPPCV 264
R++ + L + I +L VGG + +ARLYD RR + R +
Sbjct: 197 RNM-----DAIQLNAIAIDPRNSNLFAVGGMEEYARLYDIRRFQGEGLNGFTRAA----- 246
Query: 265 NYFCPMHLSEHGRSSLHLTHVTFSPNGEEVLLSYSGEHVYL 305
++FCP HL G + +T + FS E +L+SY+ E +YL
Sbjct: 247 DHFCPPHLI--GNEDVGITGLAFSEQSE-LLVSYNDEFIYL 284
Score = 125 (49.1 bits), Expect = 3.0e-27, Sum P(2) = 3.0e-27
Identities = 26/60 (43%), Positives = 38/60 (63%)
Query: 619 YVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAGNVISSME 678
Y GH N T +K +F G R +Y+ SGSD GR FIW K+ G LI+++ D +V++ +E
Sbjct: 327 YKGHKNCET-VKGVNFFGPRSEYVVSGSDCGRIFIWRKKGGELIRVMEADR--HVVNCIE 383
Score = 56 (24.8 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 15/43 (34%), Positives = 22/43 (51%)
Query: 103 PETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQC 145
P S+ V G + RL+++ RF G GL N T +A + C
Sbjct: 211 PRNSNLFAVGGM-EEYARLYDIRRFQGEGL--NGFTRAADHFC 250
>GENEDB_PFALCIPARUM|PF14_0262 [details] [associations]
symbol:PF14_0262 "hypothetical protein"
species:5833 "Plasmodium falciparum" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:AE014187 RefSeq:XP_001348436.2
ProteinModelPortal:Q8ILI1 EnsemblProtists:PF14_0262:mRNA
GeneID:811844 KEGG:pfa:PF14_0262 EuPathDB:PlasmoDB:PF3D7_1428400
Uniprot:Q8ILI1
Length = 1990
Score = 215 (80.7 bits), Expect = 2.2e-24, Sum P(3) = 2.2e-24
Identities = 57/215 (26%), Positives = 107/215 (49%)
Query: 10 SIY-DMLDTRHTDTRPDVNH-SLQMHSSLVRRLSQERELEGHQGCVNAISWNSKGSLLIS 67
++Y D++ ++ + H ++Q + + RL L GH VN + WN LL S
Sbjct: 10 NVYNDIIKLKYNKNYSNYIHQNVQSNKFFISRLKNTMTLNGHTSFVNRLKWNDDNHLLAS 69
Query: 68 GSDDTHINVW---SYSSR-KLLHSIETGHSANVFCTKFVPETSDELVVSGAGDAEVRLFN 123
D + +W SY+ + K + T H +++F F+ ++ V++GA D +V ++N
Sbjct: 70 CGSDRKVLIWNINSYNYKPKPKCIVNTNHVSSIFGVSFI---DNDFVITGAMDKQVHVYN 126
Query: 124 LSRFSGRGLDDNAITPSALYQCHTRRVKKLA-VEVGNPHVVWSASEDGTLRQHDFRQGSS 182
+ DD+ ++ CH + V+ +A + N ++ WS+S+DGT+RQ+D R+
Sbjct: 127 IH-------DDSY---KVIHNCHLKTVRHIATIPKENKNIFWSSSDDGTVRQYDTREKHI 176
Query: 183 CPPAGSSHQECRNILLDL-RCGAKRSLADPPKQTL 216
C CRN++++L R G + P++ L
Sbjct: 177 CVSPN-----CRNVIINLNRIGDQYYTQRNPEERL 206
Score = 127 (49.8 bits), Expect = 2.2e-24, Sum P(3) = 2.2e-24
Identities = 62/233 (26%), Positives = 109/233 (46%)
Query: 233 VGGSDAFARLYDRRMLPPLTSCQKRMSPPPCV--NYFCPMHL----SEHG--RSSLHL-- 282
V +D +R+YDRRML S ++M+ C+ + + P HL E R + HL
Sbjct: 256 VCSNDMLSRVYDRRMLGKF-SLNEKMTLRSCIPSDTYYPKHLWNYIDEESDFRINYHLFY 314
Query: 283 -THVTFSPNGEEVLLSYSGEHVYLMD-VNHAGGRAMRYTVGDASKIMSFTPTLNGLELQP 340
T + +S NG+ + ++Y+ EHVYL D +N R++ Y + D + + + L P
Sbjct: 315 STDLCWSNNGKYLGVTYNTEHVYLYDFLNKEEERSLNYNIIDNDTKFDYNKSFD--ILFP 372
Query: 341 PIHD---FL----QTNIRVR-GEVATGLGKCRMLVEIARNS-LEEGKHPYYGIEAC-NEV 390
P + ++ + N R R E ++ +I +++ L YY E N
Sbjct: 373 PYDNKDVYMYWNNKKNDRNRMKEYFDYNNNMSLIQDIEKSAILAYDNKEYYKAEYLYNNC 432
Query: 391 LEGHLSGIGPMLRHECLCIRAALLLKRKWKNDAQMAIRDCYNARRIDSSSFRA 443
L +LS +R C A +L++RK +ND +A + A ++D + ++A
Sbjct: 433 L--NLSR-NKNIRKILYCNLAMVLIQRKARNDGYLAEQYALEALKLDPNYYKA 482
Score = 81 (33.6 bits), Expect = 2.2e-24, Sum P(3) = 2.2e-24
Identities = 14/49 (28%), Positives = 29/49 (59%)
Query: 617 QRYVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKML 665
+R++GH N ++K+ +F D I + SD+G + W + G+L+ ++
Sbjct: 1882 KRFLGHSNTAWEMKELAFWND--DVILAASDNGEVYFWSIKDGKLLNVI 1928
Score = 38 (18.4 bits), Expect = 3.0e-15, Sum P(3) = 3.0e-15
Identities = 6/11 (54%), Positives = 7/11 (63%)
Query: 372 NSLEEGKHPYY 382
N E+ K PYY
Sbjct: 544 NDTEDSKQPYY 554
>UNIPROTKB|Q8ILI1 [details] [associations]
symbol:PF14_0262 "Putative uncharacterized protein"
species:36329 "Plasmodium falciparum 3D7" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:AE014187 RefSeq:XP_001348436.2
ProteinModelPortal:Q8ILI1 EnsemblProtists:PF14_0262:mRNA
GeneID:811844 KEGG:pfa:PF14_0262 EuPathDB:PlasmoDB:PF3D7_1428400
Uniprot:Q8ILI1
Length = 1990
Score = 215 (80.7 bits), Expect = 2.2e-24, Sum P(3) = 2.2e-24
Identities = 57/215 (26%), Positives = 107/215 (49%)
Query: 10 SIY-DMLDTRHTDTRPDVNH-SLQMHSSLVRRLSQERELEGHQGCVNAISWNSKGSLLIS 67
++Y D++ ++ + H ++Q + + RL L GH VN + WN LL S
Sbjct: 10 NVYNDIIKLKYNKNYSNYIHQNVQSNKFFISRLKNTMTLNGHTSFVNRLKWNDDNHLLAS 69
Query: 68 GSDDTHINVW---SYSSR-KLLHSIETGHSANVFCTKFVPETSDELVVSGAGDAEVRLFN 123
D + +W SY+ + K + T H +++F F+ ++ V++GA D +V ++N
Sbjct: 70 CGSDRKVLIWNINSYNYKPKPKCIVNTNHVSSIFGVSFI---DNDFVITGAMDKQVHVYN 126
Query: 124 LSRFSGRGLDDNAITPSALYQCHTRRVKKLA-VEVGNPHVVWSASEDGTLRQHDFRQGSS 182
+ DD+ ++ CH + V+ +A + N ++ WS+S+DGT+RQ+D R+
Sbjct: 127 IH-------DDSY---KVIHNCHLKTVRHIATIPKENKNIFWSSSDDGTVRQYDTREKHI 176
Query: 183 CPPAGSSHQECRNILLDL-RCGAKRSLADPPKQTL 216
C CRN++++L R G + P++ L
Sbjct: 177 CVSPN-----CRNVIINLNRIGDQYYTQRNPEERL 206
Score = 127 (49.8 bits), Expect = 2.2e-24, Sum P(3) = 2.2e-24
Identities = 62/233 (26%), Positives = 109/233 (46%)
Query: 233 VGGSDAFARLYDRRMLPPLTSCQKRMSPPPCV--NYFCPMHL----SEHG--RSSLHL-- 282
V +D +R+YDRRML S ++M+ C+ + + P HL E R + HL
Sbjct: 256 VCSNDMLSRVYDRRMLGKF-SLNEKMTLRSCIPSDTYYPKHLWNYIDEESDFRINYHLFY 314
Query: 283 -THVTFSPNGEEVLLSYSGEHVYLMD-VNHAGGRAMRYTVGDASKIMSFTPTLNGLELQP 340
T + +S NG+ + ++Y+ EHVYL D +N R++ Y + D + + + L P
Sbjct: 315 STDLCWSNNGKYLGVTYNTEHVYLYDFLNKEEERSLNYNIIDNDTKFDYNKSFD--ILFP 372
Query: 341 PIHD---FL----QTNIRVR-GEVATGLGKCRMLVEIARNS-LEEGKHPYYGIEAC-NEV 390
P + ++ + N R R E ++ +I +++ L YY E N
Sbjct: 373 PYDNKDVYMYWNNKKNDRNRMKEYFDYNNNMSLIQDIEKSAILAYDNKEYYKAEYLYNNC 432
Query: 391 LEGHLSGIGPMLRHECLCIRAALLLKRKWKNDAQMAIRDCYNARRIDSSSFRA 443
L +LS +R C A +L++RK +ND +A + A ++D + ++A
Sbjct: 433 L--NLSR-NKNIRKILYCNLAMVLIQRKARNDGYLAEQYALEALKLDPNYYKA 482
Score = 81 (33.6 bits), Expect = 2.2e-24, Sum P(3) = 2.2e-24
Identities = 14/49 (28%), Positives = 29/49 (59%)
Query: 617 QRYVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKML 665
+R++GH N ++K+ +F D I + SD+G + W + G+L+ ++
Sbjct: 1882 KRFLGHSNTAWEMKELAFWND--DVILAASDNGEVYFWSIKDGKLLNVI 1928
Score = 38 (18.4 bits), Expect = 3.0e-15, Sum P(3) = 3.0e-15
Identities = 6/11 (54%), Positives = 7/11 (63%)
Query: 372 NSLEEGKHPYY 382
N E+ K PYY
Sbjct: 544 NDTEDSKQPYY 554
>UNIPROTKB|G3N3E5 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 OMA:KLWKSDT EMBL:DAAA02032365
Ensembl:ENSBTAT00000066090 Uniprot:G3N3E5
Length = 308
Score = 162 (62.1 bits), Expect = 2.0e-13, Sum P(3) = 2.0e-13
Identities = 31/82 (37%), Positives = 55/82 (67%)
Query: 43 ERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFV 102
E+ + GH+ ++ ++W+S +LL+S SDD + +W SS K L +++ GHS VFC F
Sbjct: 54 EKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLK-GHSNYVFCCNFN 112
Query: 103 PETSDELVVSGAGDAEVRLFNL 124
P+++ L+VSG+ D VR++++
Sbjct: 113 PQSN--LIVSGSFDESVRIWDV 132
Score = 102 (41.0 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 35/137 (25%), Positives = 65/137 (47%)
Query: 44 RELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVP 103
+ L+GH V ++N + +L++SGS D + +W + K L ++ HS V F
Sbjct: 97 KTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPA-HSDPVSAVHFNR 155
Query: 104 ETSDELVVSGAGDAEVRLFNLSRFSGRGL-----DDNAITPSALYQCHTRRVKKLAVEVG 158
+ S L+VS + D R+++ + SG+ L DDN + + + + LA +
Sbjct: 156 DGS--LIVSSSYDGLCRIWDTA--SGQCLKTLIDDDNPPVSFVKFSPNGKYI--LAATLD 209
Query: 159 NPHVVWSASEDGTLRQH 175
N +W S+ L+ +
Sbjct: 210 NTLKLWDYSKGKCLKTY 226
Score = 82 (33.9 bits), Expect = 0.00038, Sum P(3) = 0.00038
Identities = 26/88 (29%), Positives = 45/88 (51%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPET 105
L GH V+++ ++ G L S S D I +W K +I +GH + V +
Sbjct: 15 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI-SGHKLGI---SDVAWS 70
Query: 106 SDE-LVVSGAGDAEVRLFNLSRFSGRGL 132
SD L+VS + D ++++++S SG+ L
Sbjct: 71 SDSNLLVSASDDKTLKIWDVS--SGKCL 96
Score = 75 (31.5 bits), Expect = 2.0e-13, Sum P(3) = 2.0e-13
Identities = 19/49 (38%), Positives = 26/49 (53%)
Query: 619 YVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLG 667
Y GH N I A+F G +I SGS+D +IW QT +++ L G
Sbjct: 226 YTGHKNEKYCIF-ANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQG 273
Score = 62 (26.9 bits), Expect = 3.7e-11, Sum P(2) = 3.7e-11
Identities = 14/43 (32%), Positives = 22/43 (51%)
Query: 627 TDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDE 669
+D A + G I S S DG IW+ +G+ +K L+ D+
Sbjct: 145 SDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDD 187
Score = 45 (20.9 bits), Expect = 2.0e-13, Sum P(3) = 2.0e-13
Identities = 12/39 (30%), Positives = 23/39 (58%)
Query: 282 LTHVTFSPNGEEVLLSYSGEHVYLMDVNHAGGRAMR-YT 319
++ V FSPNG+ +L + + L D ++ G+ ++ YT
Sbjct: 191 VSFVKFSPNGKYILAATLDNTLKLWD--YSKGKCLKTYT 227
Score = 43 (20.2 bits), Expect = 3.4e-09, Sum P(2) = 3.4e-09
Identities = 11/45 (24%), Positives = 19/45 (42%)
Query: 625 VGTDIKQASFL--GQRGDYIASGSDDGRWFIWEKQTGRLIKMLLG 667
+ D SF+ G YI + + D +W+ G+ +K G
Sbjct: 184 IDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTG 228
>UNIPROTKB|Q2KIG2 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISS] [GO:0035064 "methylated histone residue binding"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISS]
[GO:0043995 "histone acetyltransferase activity (H4-K5 specific)"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0043982 "histone H4-K8 acetylation" evidence=ISS]
[GO:0043981 "histone H4-K5 acetylation" evidence=ISS] [GO:0048188
"Set1C/COMPASS complex" evidence=ISS] [GO:0035097 "histone
methyltransferase complex" evidence=ISS] [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0035064 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 HSSP:P61964
KO:K14963 HOVERGEN:HBG055117 EMBL:BC112650 IPI:IPI00711741
RefSeq:NP_001098945.1 UniGene:Bt.39594 ProteinModelPortal:Q2KIG2
SMR:Q2KIG2 GeneID:100125836 KEGG:bta:100125836 CTD:11091
NextBio:20788854 Uniprot:Q2KIG2
Length = 334
Score = 162 (62.1 bits), Expect = 4.2e-13, Sum P(3) = 4.2e-13
Identities = 31/82 (37%), Positives = 55/82 (67%)
Query: 43 ERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFV 102
E+ + GH+ ++ ++W+S +LL+S SDD + +W SS K L +++ GHS VFC F
Sbjct: 80 EKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLK-GHSNYVFCCNFN 138
Query: 103 PETSDELVVSGAGDAEVRLFNL 124
P+++ L+VSG+ D VR++++
Sbjct: 139 PQSN--LIVSGSFDESVRIWDV 158
Score = 102 (41.0 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 35/137 (25%), Positives = 65/137 (47%)
Query: 44 RELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVP 103
+ L+GH V ++N + +L++SGS D + +W + K L ++ HS V F
Sbjct: 123 KTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPA-HSDPVSAVHFNR 181
Query: 104 ETSDELVVSGAGDAEVRLFNLSRFSGRGL-----DDNAITPSALYQCHTRRVKKLAVEVG 158
+ S L+VS + D R+++ + SG+ L DDN + + + + LA +
Sbjct: 182 DGS--LIVSSSYDGLCRIWDTA--SGQCLKTLIDDDNPPVSFVKFSPNGKYI--LAATLD 235
Query: 159 NPHVVWSASEDGTLRQH 175
N +W S+ L+ +
Sbjct: 236 NTLKLWDYSKGKCLKTY 252
Score = 82 (33.9 bits), Expect = 0.00053, Sum P(3) = 0.00053
Identities = 26/88 (29%), Positives = 45/88 (51%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPET 105
L GH V+++ ++ G L S S D I +W K +I +GH + V +
Sbjct: 41 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI-SGHKLGI---SDVAWS 96
Query: 106 SDE-LVVSGAGDAEVRLFNLSRFSGRGL 132
SD L+VS + D ++++++S SG+ L
Sbjct: 97 SDSNLLVSASDDKTLKIWDVS--SGKCL 122
Score = 75 (31.5 bits), Expect = 4.2e-13, Sum P(3) = 4.2e-13
Identities = 19/49 (38%), Positives = 26/49 (53%)
Query: 619 YVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLG 667
Y GH N I A+F G +I SGS+D +IW QT +++ L G
Sbjct: 252 YTGHKNEKYCIF-ANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQG 299
Score = 62 (26.9 bits), Expect = 6.1e-11, Sum P(2) = 6.1e-11
Identities = 14/43 (32%), Positives = 22/43 (51%)
Query: 627 TDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDE 669
+D A + G I S S DG IW+ +G+ +K L+ D+
Sbjct: 171 SDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDD 213
Score = 45 (20.9 bits), Expect = 4.2e-13, Sum P(3) = 4.2e-13
Identities = 12/39 (30%), Positives = 23/39 (58%)
Query: 282 LTHVTFSPNGEEVLLSYSGEHVYLMDVNHAGGRAMR-YT 319
++ V FSPNG+ +L + + L D ++ G+ ++ YT
Sbjct: 217 VSFVKFSPNGKYILAATLDNTLKLWD--YSKGKCLKTYT 253
Score = 43 (20.2 bits), Expect = 5.6e-09, Sum P(2) = 5.6e-09
Identities = 11/45 (24%), Positives = 19/45 (42%)
Query: 625 VGTDIKQASFL--GQRGDYIASGSDDGRWFIWEKQTGRLIKMLLG 667
+ D SF+ G YI + + D +W+ G+ +K G
Sbjct: 210 IDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTG 254
>UNIPROTKB|P61964 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0048188 "Set1C/COMPASS complex" evidence=IDA]
[GO:0035097 "histone methyltransferase complex" evidence=IDA]
[GO:0051568 "histone H3-K4 methylation" evidence=IDA] [GO:0071339
"MLL1 complex" evidence=IDA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IDA] [GO:0043984 "histone
H4-K16 acetylation" evidence=IDA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IDA]
[GO:0000123 "histone acetyltransferase complex" evidence=IDA]
[GO:0043981 "histone H4-K5 acetylation" evidence=IDA] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=IDA]
[GO:0043982 "histone H4-K8 acetylation" evidence=IDA] [GO:0043996
"histone acetyltransferase activity (H4-K8 specific)" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043966 "histone H3
acetylation" evidence=IDA] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
Pathway_Interaction_DB:circadianpathway GO:GO:0043966 GO:GO:0043981
GO:GO:0043982 PDB:4A7J PDBsum:4A7J GO:GO:0043984 PDB:3EG6 PDB:3EMH
PDB:3P4F PDB:4ESG PDBsum:3EG6 PDBsum:3EMH PDBsum:3P4F PDBsum:4ESG
PDB:3UVK PDB:4ERQ PDBsum:3UVK PDBsum:4ERQ PDB:3UVL PDB:4ERY
PDBsum:3UVL PDBsum:4ERY PDB:3UVM PDB:4ERZ PDBsum:3UVM PDBsum:4ERZ
PDB:3UVN PDB:4EWR PDBsum:3UVN PDBsum:4EWR PDB:3UVO PDB:4ES0
PDBsum:3UVO PDBsum:4ES0 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 EMBL:AJ011376 EMBL:AK000552
EMBL:BC001635 IPI:IPI00005492 RefSeq:NP_060058.1 RefSeq:NP_438172.1
UniGene:Hs.397638 PDB:2CNX PDB:2CO0 PDB:2G99 PDB:2G9A PDB:2GNQ
PDB:2H13 PDB:2H14 PDB:2H68 PDB:2H6K PDB:2H6N PDB:2H6Q PDB:2H9L
PDB:2H9M PDB:2H9N PDB:2H9P PDB:2O9K PDB:3MXX PDB:3N0D PDB:3N0E
PDB:3PSL PDB:3SMR PDB:3UR4 PDB:4IA9 PDBsum:2CNX PDBsum:2CO0
PDBsum:2G99 PDBsum:2G9A PDBsum:2GNQ PDBsum:2H13 PDBsum:2H14
PDBsum:2H68 PDBsum:2H6K PDBsum:2H6N PDBsum:2H6Q PDBsum:2H9L
PDBsum:2H9M PDBsum:2H9N PDBsum:2H9P PDBsum:2O9K PDBsum:3MXX
PDBsum:3N0D PDBsum:3N0E PDBsum:3PSL PDBsum:3SMR PDBsum:3UR4
PDBsum:4IA9 ProteinModelPortal:P61964 SMR:P61964 DIP:DIP-29223N
IntAct:P61964 MINT:MINT-1464227 STRING:P61964 PhosphoSite:P61964
DMDM:48429182 PaxDb:P61964 PRIDE:P61964 DNASU:11091
Ensembl:ENST00000358625 Ensembl:ENST00000425041 GeneID:11091
KEGG:hsa:11091 UCSC:uc004cey.3 GeneCards:GC09P137001
HGNC:HGNC:12757 MIM:609012 neXtProt:NX_P61964 PharmGKB:PA37361
InParanoid:P61964 OrthoDB:EOG4QVCCF PhylomeDB:P61964
BindingDB:P61964 ChEMBL:CHEMBL1075317 EvolutionaryTrace:P61964
GenomeRNAi:11091 NextBio:42156 Bgee:P61964 CleanEx:HS_WDR5
Genevestigator:P61964 GermOnline:ENSG00000196363 Uniprot:P61964
Length = 334
Score = 162 (62.1 bits), Expect = 4.2e-13, Sum P(3) = 4.2e-13
Identities = 31/82 (37%), Positives = 55/82 (67%)
Query: 43 ERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFV 102
E+ + GH+ ++ ++W+S +LL+S SDD + +W SS K L +++ GHS VFC F
Sbjct: 80 EKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLK-GHSNYVFCCNFN 138
Query: 103 PETSDELVVSGAGDAEVRLFNL 124
P+++ L+VSG+ D VR++++
Sbjct: 139 PQSN--LIVSGSFDESVRIWDV 158
Score = 102 (41.0 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 35/137 (25%), Positives = 65/137 (47%)
Query: 44 RELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVP 103
+ L+GH V ++N + +L++SGS D + +W + K L ++ HS V F
Sbjct: 123 KTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPA-HSDPVSAVHFNR 181
Query: 104 ETSDELVVSGAGDAEVRLFNLSRFSGRGL-----DDNAITPSALYQCHTRRVKKLAVEVG 158
+ S L+VS + D R+++ + SG+ L DDN + + + + LA +
Sbjct: 182 DGS--LIVSSSYDGLCRIWDTA--SGQCLKTLIDDDNPPVSFVKFSPNGKYI--LAATLD 235
Query: 159 NPHVVWSASEDGTLRQH 175
N +W S+ L+ +
Sbjct: 236 NTLKLWDYSKGKCLKTY 252
Score = 82 (33.9 bits), Expect = 0.00053, Sum P(3) = 0.00053
Identities = 26/88 (29%), Positives = 45/88 (51%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPET 105
L GH V+++ ++ G L S S D I +W K +I +GH + V +
Sbjct: 41 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI-SGHKLGI---SDVAWS 96
Query: 106 SDE-LVVSGAGDAEVRLFNLSRFSGRGL 132
SD L+VS + D ++++++S SG+ L
Sbjct: 97 SDSNLLVSASDDKTLKIWDVS--SGKCL 122
Score = 75 (31.5 bits), Expect = 4.2e-13, Sum P(3) = 4.2e-13
Identities = 19/49 (38%), Positives = 26/49 (53%)
Query: 619 YVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLG 667
Y GH N I A+F G +I SGS+D +IW QT +++ L G
Sbjct: 252 YTGHKNEKYCIF-ANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQG 299
Score = 62 (26.9 bits), Expect = 6.1e-11, Sum P(2) = 6.1e-11
Identities = 14/43 (32%), Positives = 22/43 (51%)
Query: 627 TDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDE 669
+D A + G I S S DG IW+ +G+ +K L+ D+
Sbjct: 171 SDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDD 213
Score = 45 (20.9 bits), Expect = 4.2e-13, Sum P(3) = 4.2e-13
Identities = 12/39 (30%), Positives = 23/39 (58%)
Query: 282 LTHVTFSPNGEEVLLSYSGEHVYLMDVNHAGGRAMR-YT 319
++ V FSPNG+ +L + + L D ++ G+ ++ YT
Sbjct: 217 VSFVKFSPNGKYILAATLDNTLKLWD--YSKGKCLKTYT 253
Score = 43 (20.2 bits), Expect = 5.6e-09, Sum P(2) = 5.6e-09
Identities = 11/45 (24%), Positives = 19/45 (42%)
Query: 625 VGTDIKQASFL--GQRGDYIASGSDDGRWFIWEKQTGRLIKMLLG 667
+ D SF+ G YI + + D +W+ G+ +K G
Sbjct: 210 IDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTG 254
>UNIPROTKB|F1S034 [details] [associations]
symbol:WDR5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT CTD:11091
EMBL:CU571409 RefSeq:XP_003353752.1 UniGene:Ssc.82589
Ensembl:ENSSSCT00000023586 GeneID:100156729 KEGG:ssc:100156729
Uniprot:F1S034
Length = 334
Score = 162 (62.1 bits), Expect = 4.2e-13, Sum P(3) = 4.2e-13
Identities = 31/82 (37%), Positives = 55/82 (67%)
Query: 43 ERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFV 102
E+ + GH+ ++ ++W+S +LL+S SDD + +W SS K L +++ GHS VFC F
Sbjct: 80 EKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLK-GHSNYVFCCNFN 138
Query: 103 PETSDELVVSGAGDAEVRLFNL 124
P+++ L+VSG+ D VR++++
Sbjct: 139 PQSN--LIVSGSFDESVRIWDV 158
Score = 102 (41.0 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 35/137 (25%), Positives = 65/137 (47%)
Query: 44 RELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVP 103
+ L+GH V ++N + +L++SGS D + +W + K L ++ HS V F
Sbjct: 123 KTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPA-HSDPVSAVHFNR 181
Query: 104 ETSDELVVSGAGDAEVRLFNLSRFSGRGL-----DDNAITPSALYQCHTRRVKKLAVEVG 158
+ S L+VS + D R+++ + SG+ L DDN + + + + LA +
Sbjct: 182 DGS--LIVSSSYDGLCRIWDTA--SGQCLKTLIDDDNPPVSFVKFSPNGKYI--LAATLD 235
Query: 159 NPHVVWSASEDGTLRQH 175
N +W S+ L+ +
Sbjct: 236 NTLKLWDYSKGKCLKTY 252
Score = 82 (33.9 bits), Expect = 0.00053, Sum P(3) = 0.00053
Identities = 26/88 (29%), Positives = 45/88 (51%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPET 105
L GH V+++ ++ G L S S D I +W K +I +GH + V +
Sbjct: 41 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI-SGHKLGI---SDVAWS 96
Query: 106 SDE-LVVSGAGDAEVRLFNLSRFSGRGL 132
SD L+VS + D ++++++S SG+ L
Sbjct: 97 SDSNLLVSASDDKTLKIWDVS--SGKCL 122
Score = 75 (31.5 bits), Expect = 4.2e-13, Sum P(3) = 4.2e-13
Identities = 19/49 (38%), Positives = 26/49 (53%)
Query: 619 YVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLG 667
Y GH N I A+F G +I SGS+D +IW QT +++ L G
Sbjct: 252 YTGHKNEKYCIF-ANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQG 299
Score = 62 (26.9 bits), Expect = 6.1e-11, Sum P(2) = 6.1e-11
Identities = 14/43 (32%), Positives = 22/43 (51%)
Query: 627 TDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDE 669
+D A + G I S S DG IW+ +G+ +K L+ D+
Sbjct: 171 SDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDD 213
Score = 45 (20.9 bits), Expect = 4.2e-13, Sum P(3) = 4.2e-13
Identities = 12/39 (30%), Positives = 23/39 (58%)
Query: 282 LTHVTFSPNGEEVLLSYSGEHVYLMDVNHAGGRAMR-YT 319
++ V FSPNG+ +L + + L D ++ G+ ++ YT
Sbjct: 217 VSFVKFSPNGKYILAATLDNTLKLWD--YSKGKCLKTYT 253
Score = 43 (20.2 bits), Expect = 5.6e-09, Sum P(2) = 5.6e-09
Identities = 11/45 (24%), Positives = 19/45 (42%)
Query: 625 VGTDIKQASFL--GQRGDYIASGSDDGRWFIWEKQTGRLIKMLLG 667
+ D SF+ G YI + + D +W+ G+ +K G
Sbjct: 210 IDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTG 254
>MGI|MGI:2155884 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10090 "Mus
musculus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO] [GO:0001501 "skeletal system development"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IDA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005671 "Ada2/Gcn5/Ada3 transcription
activator complex" evidence=ISO;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0035097 "histone methyltransferase
complex" evidence=ISO] [GO:0043966 "histone H3 acetylation"
evidence=ISO] [GO:0043981 "histone H4-K5 acetylation" evidence=ISO]
[GO:0043982 "histone H4-K8 acetylation" evidence=ISO] [GO:0043984
"histone H4-K16 acetylation" evidence=ISO] [GO:0048188
"Set1C/COMPASS complex" evidence=ISO] [GO:0051568 "histone H3-K4
methylation" evidence=ISO] [GO:0071339 "MLL1 complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:2155884 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0035097
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984
GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 PDB:2XL2 PDB:2XL3 PDBsum:2XL2
PDBsum:2XL3 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:AF416510
EMBL:AK075937 EMBL:BC008547 EMBL:BC016103 EMBL:BC025801
IPI:IPI00139957 RefSeq:NP_543124.1 UniGene:Mm.28265
ProteinModelPortal:P61965 SMR:P61965 IntAct:P61965 STRING:P61965
PhosphoSite:P61965 PaxDb:P61965 PRIDE:P61965
Ensembl:ENSMUST00000113952 GeneID:140858 KEGG:mmu:140858
BindingDB:P61965 EvolutionaryTrace:P61965 NextBio:370017
Bgee:P61965 CleanEx:MM_WDR5 Genevestigator:P61965
GermOnline:ENSMUSG00000026917 Uniprot:P61965
Length = 334
Score = 162 (62.1 bits), Expect = 4.2e-13, Sum P(3) = 4.2e-13
Identities = 31/82 (37%), Positives = 55/82 (67%)
Query: 43 ERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFV 102
E+ + GH+ ++ ++W+S +LL+S SDD + +W SS K L +++ GHS VFC F
Sbjct: 80 EKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLK-GHSNYVFCCNFN 138
Query: 103 PETSDELVVSGAGDAEVRLFNL 124
P+++ L+VSG+ D VR++++
Sbjct: 139 PQSN--LIVSGSFDESVRIWDV 158
Score = 102 (41.0 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 35/137 (25%), Positives = 65/137 (47%)
Query: 44 RELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVP 103
+ L+GH V ++N + +L++SGS D + +W + K L ++ HS V F
Sbjct: 123 KTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPA-HSDPVSAVHFNR 181
Query: 104 ETSDELVVSGAGDAEVRLFNLSRFSGRGL-----DDNAITPSALYQCHTRRVKKLAVEVG 158
+ S L+VS + D R+++ + SG+ L DDN + + + + LA +
Sbjct: 182 DGS--LIVSSSYDGLCRIWDTA--SGQCLKTLIDDDNPPVSFVKFSPNGKYI--LAATLD 235
Query: 159 NPHVVWSASEDGTLRQH 175
N +W S+ L+ +
Sbjct: 236 NTLKLWDYSKGKCLKTY 252
Score = 82 (33.9 bits), Expect = 0.00053, Sum P(3) = 0.00053
Identities = 26/88 (29%), Positives = 45/88 (51%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPET 105
L GH V+++ ++ G L S S D I +W K +I +GH + V +
Sbjct: 41 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI-SGHKLGI---SDVAWS 96
Query: 106 SDE-LVVSGAGDAEVRLFNLSRFSGRGL 132
SD L+VS + D ++++++S SG+ L
Sbjct: 97 SDSNLLVSASDDKTLKIWDVS--SGKCL 122
Score = 75 (31.5 bits), Expect = 4.2e-13, Sum P(3) = 4.2e-13
Identities = 19/49 (38%), Positives = 26/49 (53%)
Query: 619 YVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLG 667
Y GH N I A+F G +I SGS+D +IW QT +++ L G
Sbjct: 252 YTGHKNEKYCIF-ANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQG 299
Score = 62 (26.9 bits), Expect = 6.1e-11, Sum P(2) = 6.1e-11
Identities = 14/43 (32%), Positives = 22/43 (51%)
Query: 627 TDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDE 669
+D A + G I S S DG IW+ +G+ +K L+ D+
Sbjct: 171 SDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDD 213
Score = 45 (20.9 bits), Expect = 4.2e-13, Sum P(3) = 4.2e-13
Identities = 12/39 (30%), Positives = 23/39 (58%)
Query: 282 LTHVTFSPNGEEVLLSYSGEHVYLMDVNHAGGRAMR-YT 319
++ V FSPNG+ +L + + L D ++ G+ ++ YT
Sbjct: 217 VSFVKFSPNGKYILAATLDNTLKLWD--YSKGKCLKTYT 253
Score = 43 (20.2 bits), Expect = 5.6e-09, Sum P(2) = 5.6e-09
Identities = 11/45 (24%), Positives = 19/45 (42%)
Query: 625 VGTDIKQASFL--GQRGDYIASGSDDGRWFIWEKQTGRLIKMLLG 667
+ D SF+ G YI + + D +W+ G+ +K G
Sbjct: 210 IDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTG 254
>RGD|1305159 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10116 "Rattus
norvegicus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO;ISS] [GO:0001501 "skeletal system development"
evidence=IEA;ISO] [GO:0005622 "intracellular" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IEA;ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0035064
"methylated histone residue binding" evidence=ISS] [GO:0035097
"histone methyltransferase complex" evidence=ISO;ISS] [GO:0042800
"histone methyltransferase activity (H3-K4 specific)"
evidence=IEA;ISO] [GO:0043966 "histone H3 acetylation"
evidence=IEA;ISO] [GO:0043981 "histone H4-K5 acetylation"
evidence=ISO;ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISO;ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISO;ISS] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=ISO;ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISO;ISS]
[GO:0046972 "histone acetyltransferase activity (H4-K16 specific)"
evidence=ISO;ISS] [GO:0048188 "Set1C/COMPASS complex"
evidence=ISO;ISS] [GO:0051568 "histone H3-K4 methylation"
evidence=ISO;ISS] [GO:0071339 "MLL1 complex" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1305159 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0000123
GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 GO:GO:0046972
GO:GO:0043995 GO:GO:0043996 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF
EMBL:BC100156 IPI:IPI00373481 RefSeq:NP_001034123.1
UniGene:Rn.106818 ProteinModelPortal:Q498M4 SMR:Q498M4
IntAct:Q498M4 STRING:Q498M4 PRIDE:Q498M4 Ensembl:ENSRNOT00000011556
GeneID:362093 KEGG:rno:362093 UCSC:RGD:1305159 InParanoid:Q498M4
BindingDB:Q498M4 NextBio:678628 Genevestigator:Q498M4
Uniprot:Q498M4
Length = 334
Score = 162 (62.1 bits), Expect = 4.2e-13, Sum P(3) = 4.2e-13
Identities = 31/82 (37%), Positives = 55/82 (67%)
Query: 43 ERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFV 102
E+ + GH+ ++ ++W+S +LL+S SDD + +W SS K L +++ GHS VFC F
Sbjct: 80 EKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLK-GHSNYVFCCNFN 138
Query: 103 PETSDELVVSGAGDAEVRLFNL 124
P+++ L+VSG+ D VR++++
Sbjct: 139 PQSN--LIVSGSFDESVRIWDV 158
Score = 102 (41.0 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 35/137 (25%), Positives = 65/137 (47%)
Query: 44 RELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVP 103
+ L+GH V ++N + +L++SGS D + +W + K L ++ HS V F
Sbjct: 123 KTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPA-HSDPVSAVHFNR 181
Query: 104 ETSDELVVSGAGDAEVRLFNLSRFSGRGL-----DDNAITPSALYQCHTRRVKKLAVEVG 158
+ S L+VS + D R+++ + SG+ L DDN + + + + LA +
Sbjct: 182 DGS--LIVSSSYDGLCRIWDTA--SGQCLKTLIDDDNPPVSFVKFSPNGKYI--LAATLD 235
Query: 159 NPHVVWSASEDGTLRQH 175
N +W S+ L+ +
Sbjct: 236 NTLKLWDYSKGKCLKTY 252
Score = 82 (33.9 bits), Expect = 0.00053, Sum P(3) = 0.00053
Identities = 26/88 (29%), Positives = 45/88 (51%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPET 105
L GH V+++ ++ G L S S D I +W K +I +GH + V +
Sbjct: 41 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI-SGHKLGI---SDVAWS 96
Query: 106 SDE-LVVSGAGDAEVRLFNLSRFSGRGL 132
SD L+VS + D ++++++S SG+ L
Sbjct: 97 SDSNLLVSASDDKTLKIWDVS--SGKCL 122
Score = 75 (31.5 bits), Expect = 4.2e-13, Sum P(3) = 4.2e-13
Identities = 19/49 (38%), Positives = 26/49 (53%)
Query: 619 YVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLG 667
Y GH N I A+F G +I SGS+D +IW QT +++ L G
Sbjct: 252 YTGHKNEKYCIF-ANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQG 299
Score = 62 (26.9 bits), Expect = 6.1e-11, Sum P(2) = 6.1e-11
Identities = 14/43 (32%), Positives = 22/43 (51%)
Query: 627 TDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDE 669
+D A + G I S S DG IW+ +G+ +K L+ D+
Sbjct: 171 SDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDD 213
Score = 45 (20.9 bits), Expect = 4.2e-13, Sum P(3) = 4.2e-13
Identities = 12/39 (30%), Positives = 23/39 (58%)
Query: 282 LTHVTFSPNGEEVLLSYSGEHVYLMDVNHAGGRAMR-YT 319
++ V FSPNG+ +L + + L D ++ G+ ++ YT
Sbjct: 217 VSFVKFSPNGKYILAATLDNTLKLWD--YSKGKCLKTYT 253
Score = 43 (20.2 bits), Expect = 5.6e-09, Sum P(2) = 5.6e-09
Identities = 11/45 (24%), Positives = 19/45 (42%)
Query: 625 VGTDIKQASFL--GQRGDYIASGSDDGRWFIWEKQTGRLIKMLLG 667
+ D SF+ G YI + + D +W+ G+ +K G
Sbjct: 210 IDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTG 254
>FB|FBgn0040066 [details] [associations]
symbol:wds "will die slowly" species:7227 "Drosophila
melanogaster" [GO:0005671 "Ada2/Gcn5/Ada3 transcription activator
complex" evidence=IPI] [GO:0006338 "chromatin remodeling"
evidence=IDA] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0016573 "histone acetylation" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0007095 "mitotic G2 DNA damage checkpoint" evidence=IGI]
[GO:0048188 "Set1C/COMPASS complex" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] [GO:0051568 "histone H3-K4
methylation" evidence=IMP;IDA] [GO:0044665 "MLL1/2 complex"
evidence=ISS] [GO:0044666 "MLL3/4 complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005875 GO:GO:0007095 GO:GO:0022008 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005671
GO:GO:0048188 GO:GO:0051568 EMBL:AF233288 EMBL:AL138972
GO:GO:0044666 GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT
EMBL:AY118386 RefSeq:NP_001245503.1 RefSeq:NP_524984.1
UniGene:Dm.7137 ProteinModelPortal:Q9V3J8 SMR:Q9V3J8 IntAct:Q9V3J8
STRING:Q9V3J8 PaxDb:Q9V3J8 PRIDE:Q9V3J8 EnsemblMetazoa:FBtr0070438
EnsemblMetazoa:FBtr0308566 GeneID:53428 KEGG:dme:Dmel_CG17437
CTD:53428 FlyBase:FBgn0040066 InParanoid:Q9V3J8 OrthoDB:EOG4DNCM1
PhylomeDB:Q9V3J8 ChiTaRS:wds GenomeRNAi:53428 NextBio:841119
Bgee:Q9V3J8 GermOnline:CG17437 Uniprot:Q9V3J8
Length = 361
Score = 163 (62.4 bits), Expect = 1.5e-12, Sum P(3) = 1.5e-12
Identities = 32/82 (39%), Positives = 55/82 (67%)
Query: 43 ERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFV 102
E+ + GH+ ++ ++W+S LL+SGSDD + VW S+ K L +++ GHS VFC F
Sbjct: 107 EKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKVWELSTGKSLKTLK-GHSNYVFCCNFN 165
Query: 103 PETSDELVVSGAGDAEVRLFNL 124
P+++ L+VSG+ D VR++++
Sbjct: 166 PQSN--LIVSGSFDESVRIWDV 185
Score = 101 (40.6 bits), Expect = 7.0e-05, Sum P(2) = 7.0e-05
Identities = 35/137 (25%), Positives = 65/137 (47%)
Query: 44 RELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVP 103
+ L+GH V ++N + +L++SGS D + +W + K L ++ HS V F
Sbjct: 150 KTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPA-HSDPVSAVHFNR 208
Query: 104 ETSDELVVSGAGDAEVRLFNLSRFSGRGL-----DDNAITPSALYQCHTRRVKKLAVEVG 158
+ S L+VS + D R+++ + SG+ L DDN + + + + LA +
Sbjct: 209 DGS--LIVSSSYDGLCRIWDTA--SGQCLKTLIDDDNPPVSFVKFSPNGKYI--LAATLD 262
Query: 159 NPHVVWSASEDGTLRQH 175
N +W S+ L+ +
Sbjct: 263 NTLKLWDYSKGKCLKTY 279
Score = 93 (37.8 bits), Expect = 0.00012, Sum P(3) = 0.00012
Identities = 40/148 (27%), Positives = 65/148 (43%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPET 105
L GH V+A+ ++ G L S S D I +W K +I +GH + V +
Sbjct: 68 LAGHTKAVSAVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI-SGHKLGI---SDVAWS 123
Query: 106 SDE-LVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVEVGNPHVVW 164
SD L+VSG+ D ++++ LS +G+ L + ++ C+ L V
Sbjct: 124 SDSRLLVSGSDDKTLKVWELS--TGKSLKTLKGHSNYVFCCNFNPQSNLIV--------- 172
Query: 165 SASEDGTLRQHDFRQGSSCPPAGSSHQE 192
S S D ++R D R G C +H +
Sbjct: 173 SGSFDESVRIWDVRTGK-CLKTLPAHSD 199
Score = 71 (30.1 bits), Expect = 1.5e-12, Sum P(3) = 1.5e-12
Identities = 18/49 (36%), Positives = 26/49 (53%)
Query: 619 YVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLG 667
Y GH N I A+F G +I SGS+D +IW Q+ +++ L G
Sbjct: 279 YTGHKNEKYCIF-ANFSVTGGKWIVSGSEDNMVYIWNLQSKEVVQKLQG 326
Score = 62 (26.9 bits), Expect = 7.1e-11, Sum P(2) = 7.1e-11
Identities = 14/43 (32%), Positives = 22/43 (51%)
Query: 627 TDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDE 669
+D A + G I S S DG IW+ +G+ +K L+ D+
Sbjct: 198 SDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDD 240
Score = 45 (20.9 bits), Expect = 1.5e-12, Sum P(3) = 1.5e-12
Identities = 12/39 (30%), Positives = 23/39 (58%)
Query: 282 LTHVTFSPNGEEVLLSYSGEHVYLMDVNHAGGRAMR-YT 319
++ V FSPNG+ +L + + L D ++ G+ ++ YT
Sbjct: 244 VSFVKFSPNGKYILAATLDNTLKLWD--YSKGKCLKTYT 280
Score = 43 (20.2 bits), Expect = 6.5e-09, Sum P(2) = 6.5e-09
Identities = 11/45 (24%), Positives = 19/45 (42%)
Query: 625 VGTDIKQASFL--GQRGDYIASGSDDGRWFIWEKQTGRLIKMLLG 667
+ D SF+ G YI + + D +W+ G+ +K G
Sbjct: 237 IDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTG 281
>UNIPROTKB|Q5M786 [details] [associations]
symbol:wdr5 "WD repeat-containing protein 5" species:8364
"Xenopus (Silurana) tropicalis" [GO:0000123 "histone
acetyltransferase complex" evidence=ISS] [GO:0034968 "histone
lysine methylation" evidence=ISS] [GO:0035064 "methylated histone
residue binding" evidence=ISS] [GO:0043981 "histone H4-K5
acetylation" evidence=ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=ISS]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0035064
GO:GO:0034968 GO:GO:0071339 GO:GO:0000123 GO:GO:0043981
GO:GO:0043982 GO:GO:0043984 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:CR761006
EMBL:BC088786 RefSeq:NP_001011411.1 UniGene:Str.64944
UniGene:Str.65618 ProteinModelPortal:Q5M786 SMR:Q5M786
STRING:Q5M786 Ensembl:ENSXETT00000042368 GeneID:496891
KEGG:xtr:496891 Xenbase:XB-GENE-493883 InParanoid:Q5M786
OMA:LWDLQTK Bgee:Q5M786 Uniprot:Q5M786
Length = 334
Score = 162 (62.1 bits), Expect = 2.2e-12, Sum P(3) = 2.2e-12
Identities = 31/82 (37%), Positives = 55/82 (67%)
Query: 43 ERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFV 102
E+ + GH+ ++ ++W+S +LL+S SDD + +W SS K L +++ GHS VFC F
Sbjct: 80 EKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLK-GHSNYVFCCNFN 138
Query: 103 PETSDELVVSGAGDAEVRLFNL 124
P+++ L+VSG+ D VR++++
Sbjct: 139 PQSN--LIVSGSFDESVRIWDV 158
Score = 102 (41.0 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 35/137 (25%), Positives = 65/137 (47%)
Query: 44 RELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVP 103
+ L+GH V ++N + +L++SGS D + +W + K L ++ HS V F
Sbjct: 123 KTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPA-HSDPVSAVHFNR 181
Query: 104 ETSDELVVSGAGDAEVRLFNLSRFSGRGL-----DDNAITPSALYQCHTRRVKKLAVEVG 158
+ S L+VS + D R+++ + SG+ L DDN + + + + LA +
Sbjct: 182 DGS--LIVSSSYDGLCRIWDTA--SGQCLKTLIDDDNPPVSFVKFSPNGKYI--LAATLD 235
Query: 159 NPHVVWSASEDGTLRQH 175
N +W S+ L+ +
Sbjct: 236 NTLKLWDYSKGKCLKTY 252
Score = 67 (28.6 bits), Expect = 2.2e-12, Sum P(3) = 2.2e-12
Identities = 14/36 (38%), Positives = 21/36 (58%)
Query: 632 ASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLG 667
A+F G +I SGS+D +IW QT +++ L G
Sbjct: 264 ANFSVTGGKWIVSGSEDNLVYIWNLQTKEVVQKLQG 299
Score = 62 (26.9 bits), Expect = 6.1e-11, Sum P(2) = 6.1e-11
Identities = 14/43 (32%), Positives = 22/43 (51%)
Query: 627 TDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDE 669
+D A + G I S S DG IW+ +G+ +K L+ D+
Sbjct: 171 SDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDD 213
Score = 46 (21.3 bits), Expect = 2.2e-12, Sum P(3) = 2.2e-12
Identities = 14/49 (28%), Positives = 25/49 (51%)
Query: 282 LTHVTFSPNGEEVLLSYSGEHVYLMDVNHAGGRAMR-YTVGDASKIMSF 329
++ V FSPNG+ +L + + L D ++ G+ ++ YT K F
Sbjct: 217 VSFVKFSPNGKYILAATLDNTLKLWD--YSKGKCLKTYTCHKNEKYCIF 263
Score = 40 (19.1 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 10/41 (24%), Positives = 18/41 (43%)
Query: 625 VGTDIKQASFL--GQRGDYIASGSDDGRWFIWEKQTGRLIK 663
+ D SF+ G YI + + D +W+ G+ +K
Sbjct: 210 IDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLK 250
>MGI|MGI:1916794 [details] [associations]
symbol:Wdr5b "WD repeat domain 5B" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1916794 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
EMBL:EF011616 EMBL:AK009247 EMBL:AK149554 EMBL:AK165100
EMBL:BC064045 IPI:IPI00110312 RefSeq:NP_081389.1 UniGene:Mm.37802
ProteinModelPortal:Q9D7H2 SMR:Q9D7H2 PhosphoSite:Q9D7H2
PRIDE:Q9D7H2 Ensembl:ENSMUST00000042203 GeneID:69544 KEGG:mmu:69544
UCSC:uc007zcc.1 CTD:54554 HOVERGEN:HBG055117 InParanoid:Q9D7H2
OMA:SAACHPT OrthoDB:EOG49S687 NextBio:329734 Bgee:Q9D7H2
CleanEx:MM_WDR5B Genevestigator:Q9D7H2 Uniprot:Q9D7H2
Length = 328
Score = 142 (55.0 bits), Expect = 1.1e-10, Sum P(3) = 1.1e-10
Identities = 44/138 (31%), Positives = 71/138 (51%)
Query: 43 ERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFV 102
++ L GH ++ ++W+S S L+S SDD + VW S K L +++ GHS VFC F
Sbjct: 74 KKTLYGHSLEISDVAWSSDSSRLVSASDDKTLKVWDMRSGKCLKTLK-GHSDFVFCCDFN 132
Query: 103 PETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVEVGNPHV 162
P ++ L+VSG+ D V+++ + +G+ L T SA H+ + + N +
Sbjct: 133 PPSN--LIVSGSFDESVKIWEVK--TGKCLK----TLSA----HSDPISAVNFNC-NGSL 179
Query: 163 VWSASEDGTLRQHDFRQG 180
+ S S DG R D G
Sbjct: 180 IVSGSYDGLCRIWDAASG 197
Score = 99 (39.9 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 37/151 (24%), Positives = 67/151 (44%)
Query: 44 RELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVP 103
+ L+GH V +N +L++SGS D + +W + K L ++ + HS + F
Sbjct: 117 KTLKGHSDFVFCCDFNPPSNLIVSGSFDESVKIWEVKTGKCLKTL-SAHSDPISAVNF-- 173
Query: 104 ETSDELVVSGAGDAEVRLFNLSRFSG---RGLDDNAITPSALYQCHTRRVKKLAVEVGNP 160
+ L+VSG+ D R+++ + SG R L D P + + N
Sbjct: 174 NCNGSLIVSGSYDGLCRIWDAA--SGQCLRTLADEGNPPVSFVKFSP-----------NG 220
Query: 161 HVVWSASEDGTLRQHDFRQGSSCPPAGSSHQ 191
+ +A+ D TL+ D+ +G C + H+
Sbjct: 221 KYILTATLDNTLKLWDYSRGR-CLKTYTGHK 250
Score = 68 (29.0 bits), Expect = 1.1e-10, Sum P(3) = 1.1e-10
Identities = 17/49 (34%), Positives = 25/49 (51%)
Query: 619 YVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLG 667
Y GH N + ASF ++ SGS+D +IW QT +++ L G
Sbjct: 246 YTGHKNEKYCLF-ASFSVTGRKWVVSGSEDNMVYIWNLQTKEIVQRLQG 293
Score = 51 (23.0 bits), Expect = 1.1e-10, Sum P(3) = 1.1e-10
Identities = 16/53 (30%), Positives = 28/53 (52%)
Query: 268 CPMHLSEHGRSSLHLTHVTFSPNGEEVLLSYSGEHVYLMDVNHAGGRAMR-YT 319
C L++ G + + V FSPNG+ +L + + L D ++ GR ++ YT
Sbjct: 199 CLRTLADEGNPPV--SFVKFSPNGKYILTATLDNTLKLWD--YSRGRCLKTYT 247
Score = 45 (20.9 bits), Expect = 6.2e-07, Sum P(2) = 6.2e-07
Identities = 9/29 (31%), Positives = 14/29 (48%)
Query: 639 GDYIASGSDDGRWFIWEKQTGRLIKMLLG 667
G YI + + D +W+ GR +K G
Sbjct: 220 GKYILTATLDNTLKLWDYSRGRCLKTYTG 248
>DICTYBASE|DDB_G0287273 [details] [associations]
symbol:wdr5 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0042393 "histone binding"
evidence=ISS] [GO:0035097 "histone methyltransferase complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0287273
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR GO:GO:0042393 GO:GO:0051568 GO:GO:0035097
EMBL:AAFI02000099 HSSP:P61964 KO:K14963 OMA:KLWKSDT
RefSeq:XP_637302.1 ProteinModelPortal:Q54KL5 SMR:Q54KL5
EnsemblProtists:DDB0232948 GeneID:8626039 KEGG:ddi:DDB_G0287273
ProtClustDB:CLSZ2430012 Uniprot:Q54KL5
Length = 335
Score = 149 (57.5 bits), Expect = 8.0e-10, Sum P(3) = 8.0e-10
Identities = 30/83 (36%), Positives = 52/83 (62%)
Query: 43 ERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFV 102
ER LEGH+ ++ I+W+ L+ S SDD I +W S K++ +++ GH VF F
Sbjct: 81 ERTLEGHKEGISDIAWSQDSKLICSASDDKTIKIWDVESGKMVKTLK-GHKEYVFGVSFN 139
Query: 103 PETSDELVVSGAGDAEVRLFNLS 125
P+++ L+VSG+ D VR+++++
Sbjct: 140 PQSN--LIVSGSFDENVRIWDVN 160
Score = 64 (27.6 bits), Expect = 8.0e-10, Sum P(3) = 8.0e-10
Identities = 17/51 (33%), Positives = 27/51 (52%)
Query: 619 YVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDE 669
Y GH N I ++F G +I +GS+D +I+ QT +++ L G E
Sbjct: 254 YTGHKNEKYCIF-STFSVTCGKWIVTGSEDNLIYIYNLQTREIVQTLAGHE 303
Score = 61 (26.5 bits), Expect = 2.5e-09, Sum P(2) = 2.5e-09
Identities = 14/37 (37%), Positives = 20/37 (54%)
Query: 639 GDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAGNVIS 675
G + SGS DG IW+ TG+L+ + E G +S
Sbjct: 184 GTLVVSGSYDGTVRIWDTTTGQLLNTI-STEDGKEVS 219
Score = 39 (18.8 bits), Expect = 8.0e-10, Sum P(3) = 8.0e-10
Identities = 8/14 (57%), Positives = 11/14 (78%)
Query: 282 LTHVTFSPNGEEVL 295
++ V FSPNG+ VL
Sbjct: 218 VSFVKFSPNGKFVL 231
>WB|WBGene00006474 [details] [associations]
symbol:wdr-5.1 species:6239 "Caenorhabditis elegans"
[GO:0000003 "reproduction" evidence=IMP] [GO:0040027 "negative
regulation of vulval development" evidence=IMP] [GO:0008406 "gonad
development" evidence=IMP] [GO:0016477 "cell migration"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0051568 "histone H3-K4
methylation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0008340 GO:GO:0006915
GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 141 (54.7 bits), Expect = 9.2e-10, Sum P(2) = 9.2e-10
Identities = 30/82 (36%), Positives = 52/82 (63%)
Query: 43 ERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFV 102
ER L GH+ VN I+W+S ++S SDD + ++ + ++ +++ GH+ VFC F
Sbjct: 122 ERTLTGHKLGVNDIAWSSDSRCVVSASDDKTLKIFEIVTSRMTKTLK-GHNNYVFCCNFN 180
Query: 103 PETSDELVVSGAGDAEVRLFNL 124
P++S LVVSG+ D VR++++
Sbjct: 181 PQSS--LVVSGSFDESVRIWDV 200
Score = 97 (39.2 bits), Expect = 6.6e-05, Sum P(2) = 6.6e-05
Identities = 39/168 (23%), Positives = 78/168 (46%)
Query: 16 DTRHTDTRPDVNHSLQMHSSLVRRLSQERELEGHQGCVNAISWNSKGSLLISGSDDTHIN 75
D+R + D + +L++ + R++ + L+GH V ++N + SL++SGS D +
Sbjct: 140 DSRCVVSASD-DKTLKIFEIVTSRMT--KTLKGHNNYVFCCNFNPQSSLVVSGSFDESVR 196
Query: 76 VWSYSSRKLLHSIETGHSANVFCTKFVPETSDELVVSGAGDAEVRLFNLSRFSG-RGLDD 134
+W + + ++ HS V F + S L+ SG+ D VR+++ + + L D
Sbjct: 197 IWDVKTGMCIKTLPA-HSDPVSAVSFNRDGS--LIASGSYDGLVRIWDTANGQCIKTLVD 253
Query: 135 NAITPSALYQCHTRRVKKLAVEVGNPHVVWSASEDGTLRQHDFRQGSS 182
+ P A + N + +++ D TL+ DF +G +
Sbjct: 254 DENPPVAFVKFSP-----------NGKYILASNLDSTLKLWDFSKGKT 290
Score = 76 (31.8 bits), Expect = 9.2e-10, Sum P(2) = 9.2e-10
Identities = 21/53 (39%), Positives = 30/53 (56%)
Query: 615 MKQRYVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLG 667
+KQ Y GH N I A+F G +I SGS+D + +IW QT +++ L G
Sbjct: 291 LKQ-YTGHENSKYCIF-ANFSVTGGKWIISGSEDCKIYIWNLQTREIVQCLEG 341
Score = 74 (31.1 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 18/41 (43%), Positives = 23/41 (56%)
Query: 629 IKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDE 669
+ SF + G IASGS DG IW+ G+ IK L+ DE
Sbjct: 216 VSAVSF-NRDGSLIASGSYDGLVRIWDTANGQCIKTLVDDE 255
Score = 52 (23.4 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 16/45 (35%), Positives = 22/45 (48%)
Query: 285 VTFSPNGEEVLLSYSGEHVYLMDVNHAGGRAMRYTVGDASKIMSF 329
V FSPNG+ +L S + L D + G +YT + SK F
Sbjct: 262 VKFSPNGKYILASNLDSTLKLWDFSK-GKTLKQYTGHENSKYCIF 305
Score = 46 (21.3 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 9/31 (29%), Positives = 15/31 (48%)
Query: 639 GDYIASGSDDGRWFIWEKQTGRLIKMLLGDE 669
G YI + + D +W+ G+ +K G E
Sbjct: 268 GKYILASNLDSTLKLWDFSKGKTLKQYTGHE 298
>UNIPROTKB|Q17963 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6239 "Caenorhabditis elegans" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0008340
GO:GO:0006915 GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 141 (54.7 bits), Expect = 9.2e-10, Sum P(2) = 9.2e-10
Identities = 30/82 (36%), Positives = 52/82 (63%)
Query: 43 ERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFV 102
ER L GH+ VN I+W+S ++S SDD + ++ + ++ +++ GH+ VFC F
Sbjct: 122 ERTLTGHKLGVNDIAWSSDSRCVVSASDDKTLKIFEIVTSRMTKTLK-GHNNYVFCCNFN 180
Query: 103 PETSDELVVSGAGDAEVRLFNL 124
P++S LVVSG+ D VR++++
Sbjct: 181 PQSS--LVVSGSFDESVRIWDV 200
Score = 97 (39.2 bits), Expect = 6.6e-05, Sum P(2) = 6.6e-05
Identities = 39/168 (23%), Positives = 78/168 (46%)
Query: 16 DTRHTDTRPDVNHSLQMHSSLVRRLSQERELEGHQGCVNAISWNSKGSLLISGSDDTHIN 75
D+R + D + +L++ + R++ + L+GH V ++N + SL++SGS D +
Sbjct: 140 DSRCVVSASD-DKTLKIFEIVTSRMT--KTLKGHNNYVFCCNFNPQSSLVVSGSFDESVR 196
Query: 76 VWSYSSRKLLHSIETGHSANVFCTKFVPETSDELVVSGAGDAEVRLFNLSRFSG-RGLDD 134
+W + + ++ HS V F + S L+ SG+ D VR+++ + + L D
Sbjct: 197 IWDVKTGMCIKTLPA-HSDPVSAVSFNRDGS--LIASGSYDGLVRIWDTANGQCIKTLVD 253
Query: 135 NAITPSALYQCHTRRVKKLAVEVGNPHVVWSASEDGTLRQHDFRQGSS 182
+ P A + N + +++ D TL+ DF +G +
Sbjct: 254 DENPPVAFVKFSP-----------NGKYILASNLDSTLKLWDFSKGKT 290
Score = 76 (31.8 bits), Expect = 9.2e-10, Sum P(2) = 9.2e-10
Identities = 21/53 (39%), Positives = 30/53 (56%)
Query: 615 MKQRYVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLG 667
+KQ Y GH N I A+F G +I SGS+D + +IW QT +++ L G
Sbjct: 291 LKQ-YTGHENSKYCIF-ANFSVTGGKWIISGSEDCKIYIWNLQTREIVQCLEG 341
Score = 74 (31.1 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 18/41 (43%), Positives = 23/41 (56%)
Query: 629 IKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDE 669
+ SF + G IASGS DG IW+ G+ IK L+ DE
Sbjct: 216 VSAVSF-NRDGSLIASGSYDGLVRIWDTANGQCIKTLVDDE 255
Score = 52 (23.4 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 16/45 (35%), Positives = 22/45 (48%)
Query: 285 VTFSPNGEEVLLSYSGEHVYLMDVNHAGGRAMRYTVGDASKIMSF 329
V FSPNG+ +L S + L D + G +YT + SK F
Sbjct: 262 VKFSPNGKYILASNLDSTLKLWDFSK-GKTLKQYTGHENSKYCIF 305
Score = 46 (21.3 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 9/31 (29%), Positives = 15/31 (48%)
Query: 639 GDYIASGSDDGRWFIWEKQTGRLIKMLLGDE 669
G YI + + D +W+ G+ +K G E
Sbjct: 268 GKYILASNLDSTLKLWDFSKGKTLKQYTGHE 298
>UNIPROTKB|A8X8C6 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6238 "Caenorhabditis briggsae" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
KO:K14963 HOGENOM:HOG000091642 EMBL:HE601123 RefSeq:XP_002641984.1
ProteinModelPortal:A8X8C6 SMR:A8X8C6 EnsemblMetazoa:CBG09206
GeneID:8583978 KEGG:cbr:CBG09206 CTD:8583978 WormBase:CBG09206
OMA:KLWKSDT Uniprot:A8X8C6
Length = 368
Score = 140 (54.3 bits), Expect = 1.6e-09, Sum P(3) = 1.6e-09
Identities = 30/85 (35%), Positives = 53/85 (62%)
Query: 40 LSQERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCT 99
LS ER L GH+ VN +W++ +++ SDD + ++ + K+ +++ GH+ VFC
Sbjct: 111 LSCERTLTGHKLGVNDFAWSADSKSIVTASDDKTLKIYEVPTVKMAKTLK-GHTNYVFCC 169
Query: 100 KFVPETSDELVVSGAGDAEVRLFNL 124
F P++S LVVSG+ D VR++++
Sbjct: 170 NFNPQSS--LVVSGSFDESVRIWDV 192
Score = 108 (43.1 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 38/161 (23%), Positives = 75/161 (46%)
Query: 16 DTRHTDTRPDVNHSLQMHSSLVRRLSQERELEGHQGCVNAISWNSKGSLLISGSDDTHIN 75
D++ T D + +L+++ V + + L+GH V ++N + SL++SGS D +
Sbjct: 132 DSKSIVTASD-DKTLKIYE--VPTVKMAKTLKGHTNYVFCCNFNPQSSLVVSGSFDESVR 188
Query: 76 VWSYSSRKLLHSIETGHSANVFCTKFVPETSDELVVSGAGDAEVRLFNLSRFSG-RGLDD 134
+W + + ++ HS V F + S L+ SG+ D VR+++ + + L D
Sbjct: 189 IWDVRTGMCVKTLPA-HSDPVSAVSFNRDGS--LITSGSYDGLVRIWDTANGQCVKTLVD 245
Query: 135 NAITPSALYQCHTRRVKKLAVEVGNPHVVWSASEDGTLRQH 175
+ P A + L+ + N +W + TL+Q+
Sbjct: 246 DENPPVAFVKFSPNGKYILSSNLDNTLKLWDFGKGKTLKQY 286
Score = 72 (30.4 bits), Expect = 1.6e-09, Sum P(3) = 1.6e-09
Identities = 23/62 (37%), Positives = 34/62 (54%)
Query: 615 MKQRYVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAGNVI 674
+KQ Y GH N I A+F G +I SGS+D + ++W QT +++ L G VI
Sbjct: 283 LKQ-YQGHENNKYCIF-ANFSVTGGKWIISGSEDCKIYVWNLQTKEVVQSLEGHTQA-VI 339
Query: 675 SS 676
+S
Sbjct: 340 AS 341
Score = 69 (29.3 bits), Expect = 5.8e-09, Sum P(2) = 5.8e-09
Identities = 16/41 (39%), Positives = 22/41 (53%)
Query: 629 IKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDE 669
+ SF + G I SGS DG IW+ G+ +K L+ DE
Sbjct: 208 VSAVSF-NRDGSLITSGSYDGLVRIWDTANGQCVKTLVDDE 247
Score = 46 (21.3 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 10/31 (32%), Positives = 15/31 (48%)
Query: 639 GDYIASGSDDGRWFIWEKQTGRLIKMLLGDE 669
G YI S + D +W+ G+ +K G E
Sbjct: 260 GKYILSSNLDNTLKLWDFGKGKTLKQYQGHE 290
Score = 41 (19.5 bits), Expect = 1.6e-09, Sum P(3) = 1.6e-09
Identities = 10/23 (43%), Positives = 13/23 (56%)
Query: 285 VTFSPNGEEVLLSYSGEHVYLMD 307
V FSPNG+ +L S + L D
Sbjct: 254 VKFSPNGKYILSSNLDNTLKLWD 276
>ZFIN|ZDB-GENE-060929-808 [details] [associations]
symbol:dcaf5 "ddb1 and cul4 associated factor 5"
species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-060929-808 Gene3D:2.130.10.10 SUPFAM:SSF50978
CTD:8816 KO:K11800 GeneTree:ENSGT00530000062951 EMBL:CR361558
EMBL:CABZ01003772 EMBL:CABZ01003773 EMBL:FP103009 EMBL:BC124494
IPI:IPI00503404 RefSeq:NP_001071020.1 UniGene:Dr.83785
Ensembl:ENSDART00000084867 GeneID:560257 KEGG:dre:560257
HOGENOM:HOG000205845 HOVERGEN:HBG095204 InParanoid:Q08BZ1
NextBio:20883350 Uniprot:Q08BZ1
Length = 789
Score = 152 (58.6 bits), Expect = 2.5e-09, Sum P(2) = 2.5e-09
Identities = 55/185 (29%), Positives = 84/185 (45%)
Query: 10 SIYDMLDTRHTDTRPDVNHSLQMHSSLVRRLSQERELEGHQGCVNAISW-NSKGSLLISG 68
S L R D P + Q ++++ GH GCVNAI + N+ G L+SG
Sbjct: 11 SAVGFLSRRTIDGHPQLKEEFQRRRLSGCSSLYKKDMLGHFGCVNAIEFSNNGGQWLVSG 70
Query: 69 SDDTHINVWSYSSRKLLHS------IETGHSANVFCTKFVPETSDELVVSGAGDAEVRLF 122
DD + +W K +HS ++ H +N+FC F +++++ V SG D +V L
Sbjct: 71 GDDRRVLLWHME--KAIHSRAKPMKLKGEHLSNIFCLAF--DSTNKRVFSGGNDEQVILH 126
Query: 123 NLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVEVGNPHVVWSASEDGTLRQHDFRQGSS 182
++ R G L N H V L+V N +V S+S+DG + D R+
Sbjct: 127 DVER--GETL--NVFL-------HDDAVYGLSVSPVNDNVFASSSDDGRVLIWDTRE--- 172
Query: 183 CPPAG 187
PP G
Sbjct: 173 -PPHG 176
Score = 70 (29.7 bits), Expect = 2.5e-09, Sum P(2) = 2.5e-09
Identities = 16/38 (42%), Positives = 20/38 (52%)
Query: 621 GHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQT 658
G+ N T +K F G R YI SGSDD ++W T
Sbjct: 273 GYFNSCT-MKSCCFAGDRDQYILSGSDDFNLYMWRIPT 309
Score = 42 (19.8 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 8/30 (26%), Positives = 15/30 (50%)
Query: 188 SSHQECRNILLDLRCGAKRSLADPPKQTLS 217
S H EC + L G R+ +P ++ ++
Sbjct: 734 SIHPECSGVELGKSAGDSRTQGEPSEREIT 763
Score = 40 (19.1 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 11/27 (40%), Positives = 15/27 (55%)
Query: 217 SLKSCDISSTRPHLLLVGGSDAFARLY 243
++KSC + R +L GSD F LY
Sbjct: 279 TMKSCCFAGDRDQYIL-SGSDDF-NLY 303
>UNIPROTKB|F1MFJ6 [details] [associations]
symbol:TBL1XR1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060070 "canonical Wnt receptor signaling pathway"
evidence=IEA] [GO:0047485 "protein N-terminus binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0017053 "transcriptional repressor complex" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0005876
"spindle microtubule" evidence=IEA] [GO:0003714 "transcription
corepressor activity" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0017053 GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0000122
GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513 GO:GO:0060070
GO:GO:0005876 GO:GO:0000118 GeneTree:ENSGT00690000102024
EMBL:DAAA02002018 EMBL:DAAA02002019 EMBL:DAAA02002020
EMBL:DAAA02002021 EMBL:DAAA02002022 EMBL:DAAA02002023
EMBL:DAAA02002024 IPI:IPI00732449 UniGene:Bt.25104
ProteinModelPortal:F1MFJ6 Ensembl:ENSBTAT00000029211 OMA:GYARIWM
NextBio:20899067 Uniprot:F1MFJ6
Length = 514
Score = 150 (57.9 bits), Expect = 7.9e-09, Sum P(2) = 7.9e-09
Identities = 40/133 (30%), Positives = 69/133 (51%)
Query: 4 FPFHDGSIYDMLDTRHTDTRPDVNHSLQMHSSLVRRLSQEREL---EGHQGCVNAISWNS 60
FPFH D+ D + +T + + +H V +L Q+R + +GH VNAI W+
Sbjct: 304 FPFHSAPALDV-DWQSNNTFASCSTDMCIH---VCKLGQDRPIKTFQGHTNEVNAIKWDP 359
Query: 61 KGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPE---TSDE----LVVSG 113
G+LL S SDD + +WS +H ++ H+ ++ K+ P TS+ ++ S
Sbjct: 360 TGNLLASCSDDMTLKIWSMKQDNCVHDLQA-HNKEIYTIKWSPTGPGTSNPNANLMLASA 418
Query: 114 AGDAEVRLFNLSR 126
+ D+ VRL+++ R
Sbjct: 419 SFDSTVRLWDVDR 431
Score = 62 (26.9 bits), Expect = 7.9e-09, Sum P(2) = 7.9e-09
Identities = 14/29 (48%), Positives = 16/29 (55%)
Query: 639 GDYIASGSDDGRWFIWEKQTGRLIKMLLG 667
G Y+ASGS D IW QTG L+ G
Sbjct: 454 GRYLASGSFDKCVHIWNTQTGALVHSYRG 482
>UNIPROTKB|Q9BZK7 [details] [associations]
symbol:TBL1XR1 "F-box-like/WD repeat-containing protein
TBL1XR1" species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0060070 "canonical Wnt receptor signaling
pathway" evidence=IMP] [GO:0003714 "transcription corepressor
activity" evidence=IGI;IDA] [GO:0042393 "histone binding"
evidence=IDA] [GO:0017053 "transcriptional repressor complex"
evidence=IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISS;IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0008013 "beta-catenin binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0005876 "spindle microtubule" evidence=IDA] [GO:0000118
"histone deacetylase complex" evidence=IDA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0047485 "protein N-terminus binding" evidence=IPI] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0007219 "Notch signaling pathway"
evidence=TAS] [GO:0044255 "cellular lipid metabolic process"
evidence=TAS] [GO:0044281 "small molecule metabolic process"
evidence=TAS] [GO:0005730 "nucleolus" evidence=IDA]
Reactome:REACT_111217 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Reactome:REACT_111102 GO:GO:0017053 GO:GO:0003714 GO:GO:0043161
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0044281 EMBL:CH471052 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0007219
GO:GO:0044255 GO:GO:0006351 GO:GO:0016568 GO:GO:0000122
GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513 GO:GO:0042393
GO:GO:0060070 GO:GO:0005876 KO:K04508 EMBL:AF314544 EMBL:AF268193
EMBL:AK022956 EMBL:BC060320 EMBL:BC113421 IPI:IPI00002922
RefSeq:NP_078941.2 UniGene:Hs.581171 ProteinModelPortal:Q9BZK7
SMR:Q9BZK7 IntAct:Q9BZK7 STRING:Q9BZK7 PhosphoSite:Q9BZK7
DMDM:23396874 PaxDb:Q9BZK7 PRIDE:Q9BZK7 Ensembl:ENST00000430069
Ensembl:ENST00000457928 GeneID:79718 KEGG:hsa:79718 UCSC:uc003fiw.4
CTD:79718 GeneCards:GC03M176737 H-InvDB:HIX0147994 HGNC:HGNC:29529
HPA:HPA019182 MIM:608628 neXtProt:NX_Q9BZK7 PharmGKB:PA134928556
HOGENOM:HOG000220902 HOVERGEN:HBG050240 InParanoid:Q9BZK7
OMA:LANNHAD OrthoDB:EOG412M5M ChiTaRS:TBL1XR1 GenomeRNAi:79718
NextBio:69065 PMAP-CutDB:Q9BZK7 ArrayExpress:Q9BZK7 Bgee:Q9BZK7
CleanEx:HS_TBL1XR1 Genevestigator:Q9BZK7 GermOnline:ENSG00000177565
Uniprot:Q9BZK7
Length = 514
Score = 149 (57.5 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 39/135 (28%), Positives = 70/135 (51%)
Query: 2 ENFPFHDGSIYDMLDTRHTDTRPDVNHSLQMHSSLVRRLSQEREL---EGHQGCVNAISW 58
+ FPFH D+ D + +T + + +H V +L Q+R + +GH VNAI W
Sbjct: 302 QQFPFHSAPALDV-DWQSNNTFASCSTDMCIH---VCKLGQDRPIKTFQGHTNEVNAIKW 357
Query: 59 NSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPE---TSDE----LVV 111
+ G+LL S SDD + +WS +H ++ H+ ++ K+ P T++ ++
Sbjct: 358 DPTGNLLASCSDDMTLKIWSMKQDNCVHDLQA-HNKEIYTIKWSPTGPGTNNPNANLMLA 416
Query: 112 SGAGDAEVRLFNLSR 126
S + D+ VRL+++ R
Sbjct: 417 SASFDSTVRLWDVDR 431
Score = 62 (26.9 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 14/29 (48%), Positives = 16/29 (55%)
Query: 639 GDYIASGSDDGRWFIWEKQTGRLIKMLLG 667
G Y+ASGS D IW QTG L+ G
Sbjct: 454 GRYLASGSFDKCVHIWNTQTGALVHSYRG 482
>UNIPROTKB|F1SGD0 [details] [associations]
symbol:TBL1XR1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060070 "canonical Wnt receptor signaling pathway"
evidence=IEA] [GO:0047485 "protein N-terminus binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0017053 "transcriptional repressor complex" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0005876
"spindle microtubule" evidence=IEA] [GO:0003714 "transcription
corepressor activity" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0017053 GO:GO:0003714 GO:GO:0043161
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0000122 GO:GO:0044212 GO:GO:0060070 GO:GO:0005876
GO:GO:0000118 GeneTree:ENSGT00690000102024 OMA:GYARIWM
EMBL:CU856317 Ensembl:ENSSSCT00000012871 Uniprot:F1SGD0
Length = 514
Score = 149 (57.5 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 39/135 (28%), Positives = 70/135 (51%)
Query: 2 ENFPFHDGSIYDMLDTRHTDTRPDVNHSLQMHSSLVRRLSQEREL---EGHQGCVNAISW 58
+ FPFH D+ D + +T + + +H V +L Q+R + +GH VNAI W
Sbjct: 302 QQFPFHSAPALDV-DWQSNNTFASCSTDMCIH---VCKLGQDRPIKTFQGHTNEVNAIKW 357
Query: 59 NSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPE---TSDE----LVV 111
+ G+LL S SDD + +WS +H ++ H+ ++ K+ P T++ ++
Sbjct: 358 DPTGNLLASCSDDMTLKIWSMKQDNCVHDLQA-HNKEIYTIKWSPTGPGTNNPNANLMLA 416
Query: 112 SGAGDAEVRLFNLSR 126
S + D+ VRL+++ R
Sbjct: 417 SASFDSTVRLWDVDR 431
Score = 62 (26.9 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 14/29 (48%), Positives = 16/29 (55%)
Query: 639 GDYIASGSDDGRWFIWEKQTGRLIKMLLG 667
G Y+ASGS D IW QTG L+ G
Sbjct: 454 GRYLASGSFDKCVHIWNTQTGALVHSYRG 482
>MGI|MGI:2441730 [details] [associations]
symbol:Tbl1xr1 "transducin (beta)-like 1X-linked receptor 1"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003714 "transcription
corepressor activity" evidence=ISO;IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IC]
[GO:0005876 "spindle microtubule" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=ISO] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0017053 "transcriptional
repressor complex" evidence=ISO] [GO:0042393 "histone binding"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IMP] [GO:0044212 "transcription
regulatory region DNA binding" evidence=ISO;IDA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO;IMP] [GO:0047485
"protein N-terminus binding" evidence=ISO] [GO:0060070 "canonical
Wnt receptor signaling pathway" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 MGI:MGI:2441730 GO:GO:0017053
GO:GO:0003714 GO:GO:0045892 GO:GO:0005654 GO:GO:0043161
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0006351 GO:GO:0016568 GO:GO:0000122
GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513 GO:GO:0060070
GO:GO:0005876 GO:GO:0000118 GeneTree:ENSGT00690000102024 KO:K04508
CTD:79718 HOGENOM:HOG000220902 HOVERGEN:HBG050240 OMA:LANNHAD
OrthoDB:EOG412M5M ChiTaRS:TBL1XR1 EMBL:AF268195 EMBL:AK029595
EMBL:AK033347 EMBL:AK036064 EMBL:AK136255 EMBL:BC018512
IPI:IPI00308283 RefSeq:NP_109657.2 UniGene:Mm.202966
UniGene:Mm.446265 ProteinModelPortal:Q8BHJ5 SMR:Q8BHJ5
IntAct:Q8BHJ5 STRING:Q8BHJ5 PhosphoSite:Q8BHJ5 PaxDb:Q8BHJ5
PRIDE:Q8BHJ5 DNASU:81004 Ensembl:ENSMUST00000063988 GeneID:81004
KEGG:mmu:81004 InParanoid:Q8BHJ5 NextBio:350342 Bgee:Q8BHJ5
CleanEx:MM_TBL1XR1 Genevestigator:Q8BHJ5
GermOnline:ENSMUSG00000027630 Uniprot:Q8BHJ5
Length = 514
Score = 149 (57.5 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 39/135 (28%), Positives = 70/135 (51%)
Query: 2 ENFPFHDGSIYDMLDTRHTDTRPDVNHSLQMHSSLVRRLSQEREL---EGHQGCVNAISW 58
+ FPFH D+ D + +T + + +H V +L Q+R + +GH VNAI W
Sbjct: 302 QQFPFHSAPALDV-DWQSNNTFASCSTDMCIH---VCKLGQDRPIKTFQGHTNEVNAIKW 357
Query: 59 NSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPE---TSDE----LVV 111
+ G+LL S SDD + +WS +H ++ H+ ++ K+ P T++ ++
Sbjct: 358 DPTGNLLASCSDDMTLKIWSMKQDNCVHDLQA-HNKEIYTIKWSPTGPGTNNPNANLMLA 416
Query: 112 SGAGDAEVRLFNLSR 126
S + D+ VRL+++ R
Sbjct: 417 SASFDSTVRLWDVDR 431
Score = 62 (26.9 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 14/29 (48%), Positives = 16/29 (55%)
Query: 639 GDYIASGSDDGRWFIWEKQTGRLIKMLLG 667
G Y+ASGS D IW QTG L+ G
Sbjct: 454 GRYLASGSFDKCVHIWNTQTGALVHSYRG 482
>RGD|1560053 [details] [associations]
symbol:Tbl1xr1 "transducin (beta)-like 1 X-linked receptor 1"
species:10116 "Rattus norvegicus" [GO:0000118 "histone deacetylase
complex" evidence=IEA;ISO] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003714 "transcription corepressor
activity" evidence=IEA;ISO] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO] [GO:0005876
"spindle microtubule" evidence=IEA;ISO] [GO:0008013 "beta-catenin
binding" evidence=IEA;ISO] [GO:0008150 "biological_process"
evidence=ND] [GO:0017053 "transcriptional repressor complex"
evidence=IEA;ISO] [GO:0042393 "histone binding" evidence=IEA;ISO]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA;ISO] [GO:0044212 "transcription regulatory
region DNA binding" evidence=IEA;ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0047485
"protein N-terminus binding" evidence=IEA;ISO] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 RGD:1560053 GO:GO:0017053 GO:GO:0003714
GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0000122 GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513
GO:GO:0060070 GO:GO:0005876 EMBL:CH473961 GO:GO:0000118
GeneTree:ENSGT00690000102024 KO:K04508 CTD:79718 OrthoDB:EOG412M5M
IPI:IPI00367976 RefSeq:NP_001102411.1 UniGene:Rn.140831
Ensembl:ENSRNOT00000015573 GeneID:365755 KEGG:rno:365755
UCSC:RGD:1560053 NextBio:687981 Uniprot:D3ZNF4
Length = 514
Score = 149 (57.5 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 39/135 (28%), Positives = 70/135 (51%)
Query: 2 ENFPFHDGSIYDMLDTRHTDTRPDVNHSLQMHSSLVRRLSQEREL---EGHQGCVNAISW 58
+ FPFH D+ D + +T + + +H V +L Q+R + +GH VNAI W
Sbjct: 302 QQFPFHSAPALDV-DWQSNNTFASCSTDMCIH---VCKLGQDRPIKTFQGHTNEVNAIKW 357
Query: 59 NSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPE---TSDE----LVV 111
+ G+LL S SDD + +WS +H ++ H+ ++ K+ P T++ ++
Sbjct: 358 DPTGNLLASCSDDMTLKIWSMKQDNCVHDLQA-HNKEIYTIKWSPTGPGTNNPNANLMLA 416
Query: 112 SGAGDAEVRLFNLSR 126
S + D+ VRL+++ R
Sbjct: 417 SASFDSTVRLWDVDR 431
Score = 62 (26.9 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 14/29 (48%), Positives = 16/29 (55%)
Query: 639 GDYIASGSDDGRWFIWEKQTGRLIKMLLG 667
G Y+ASGS D IW QTG L+ G
Sbjct: 454 GRYLASGSFDKCVHIWNTQTGALVHSYRG 482
>TAIR|locus:2140215 [details] [associations]
symbol:WDR5b "AT4G02730" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002687 GenomeReviews:CT486007_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AL161495 HSSP:P16649 GO:GO:0080008 EMBL:AC004044 KO:K14963
HOGENOM:HOG000091642 ProtClustDB:CLSN2684254 EMBL:AF439825
EMBL:AY088121 EMBL:AY125558 IPI:IPI00523608 PIR:G85034
RefSeq:NP_192182.1 UniGene:At.26627 ProteinModelPortal:Q9SY00
SMR:Q9SY00 EnsemblPlants:AT4G02730.1 GeneID:828189
KEGG:ath:AT4G02730 TAIR:At4g02730 InParanoid:Q9SY00 OMA:ETIRIWE
PhylomeDB:Q9SY00 ArrayExpress:Q9SY00 Genevestigator:Q9SY00
Uniprot:Q9SY00
Length = 333
Score = 125 (49.1 bits), Expect = 3.6e-08, Sum P(2) = 3.6e-08
Identities = 34/135 (25%), Positives = 65/135 (48%)
Query: 47 EGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPETS 106
EGH ++ ++W+S S SDD + +W S + GH+ VFC F P ++
Sbjct: 82 EGHSSGISDLAWSSDSHYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPPSN 141
Query: 107 DELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVEVGNPHVVWSA 166
L+VSG+ D +R++ + +G+ + + + H+ + + +V SA
Sbjct: 142 --LIVSGSFDETIRIWEVK--TGKCV--------RMIKAHSMPISSVHFNRDGSLIV-SA 188
Query: 167 SEDGTLRQHDFRQGS 181
S DG+ + D ++G+
Sbjct: 189 SHDGSCKIWDAKEGT 203
Score = 99 (39.9 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 21/80 (26%), Positives = 43/80 (53%)
Query: 44 RELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVP 103
+ LEGH ++ + +++ G+LL S S D + +WS ++ L+H E GHS+ + +
Sbjct: 37 KTLEGHTAAISCVKFSNDGNLLASASVDKTMILWSATNYSLIHRYE-GHSSGI--SDLAW 93
Query: 104 ETSDELVVSGAGDAEVRLFN 123
+ S + D +R+++
Sbjct: 94 SSDSHYTCSASDDCTLRIWD 113
Score = 92 (37.4 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 22/78 (28%), Positives = 40/78 (51%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPET 105
L GH V +++N +L++SGS D I +W + K + I+ HS + F +
Sbjct: 124 LRGHTNFVFCVNFNPPSNLIVSGSFDETIRIWEVKTGKCVRMIKA-HSMPISSVHFNRDG 182
Query: 106 SDELVVSGAGDAEVRLFN 123
S L+VS + D ++++
Sbjct: 183 S--LIVSASHDGSCKIWD 198
Score = 76 (31.8 bits), Expect = 3.6e-08, Sum P(2) = 3.6e-08
Identities = 18/49 (36%), Positives = 25/49 (51%)
Query: 619 YVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLG 667
Y GH N I A F G YI SGS+D ++W+ Q +++ L G
Sbjct: 251 YTGHTNKVFCITSA-FSVTNGKYIVSGSEDNCVYLWDLQARNILQRLEG 298
Score = 61 (26.5 bits), Expect = 0.00092, Sum P(2) = 0.00092
Identities = 12/32 (37%), Positives = 18/32 (56%)
Query: 639 GDYIASGSDDGRWFIWEKQTGRLIKMLLGDEA 670
G I S S DG IW+ + G +K L+ D++
Sbjct: 182 GSLIVSASHDGSCKIWDAKEGTCLKTLIDDKS 213
Score = 55 (24.4 bits), Expect = 5.1e-06, Sum P(2) = 5.1e-06
Identities = 13/44 (29%), Positives = 24/44 (54%)
Query: 287 FSPNGEEVLLSYSGEHVYLMDVNHAGGRAMRYTVGDASKIMSFT 330
FSPNG+ +L++ + L N+A G+ ++ G +K+ T
Sbjct: 221 FSPNGKFILVATLDSTLKLS--NYATGKFLKVYTGHTNKVFCIT 262
>UNIPROTKB|E1BV27 [details] [associations]
symbol:TBL1X "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003682 "chromatin binding" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0043627 "response to estrogen stimulus"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0045444 "fat cell differentiation"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0003714
GO:GO:0045892 GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0003682 GO:GO:0005667
GO:GO:0044212 GO:GO:0043627 InterPro:IPR013720 Pfam:PF08513
GO:GO:0045444 GeneTree:ENSGT00690000102024 KO:K04508 CTD:6907
OMA:RAHSVNN EMBL:AADN02017315 EMBL:AADN02017316 EMBL:AADN02017317
EMBL:AADN02017318 EMBL:AADN02017319 EMBL:AADN02017320
EMBL:AADN02017321 EMBL:AADN02017322 EMBL:AADN02017323
EMBL:AADN02017324 IPI:IPI00589153 RefSeq:NP_001153226.1
UniGene:Gga.5909 ProteinModelPortal:E1BV27
Ensembl:ENSGALT00000021808 GeneID:426045 KEGG:gga:426045
NextBio:20827776 Uniprot:E1BV27
Length = 523
Score = 147 (56.8 bits), Expect = 3.6e-08, Sum P(2) = 3.6e-08
Identities = 41/135 (30%), Positives = 68/135 (50%)
Query: 2 ENFPFHDGSIYDMLDTRHTDTRPDVNHSLQMHSSLVRRLSQEREL---EGHQGCVNAISW 58
+ FPFH D+ D ++ T + + +H V RL +R + +GH VNAI W
Sbjct: 311 QQFPFHSAPALDV-DWQNNTTFASCSTDMCIH---VCRLGCDRPVKTFQGHTNEVNAIKW 366
Query: 59 NSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPE---TSDE----LVV 111
+ G LL S SDD + +WS +H ++ HS ++ K+ P TS+ ++
Sbjct: 367 DPSGMLLASCSDDMTLKIWSMKQDTCVHDLQA-HSKEIYTIKWSPTGPGTSNPNSNIMLA 425
Query: 112 SGAGDAEVRLFNLSR 126
S + D+ VRL+++ R
Sbjct: 426 SASFDSTVRLWDVDR 440
Score = 59 (25.8 bits), Expect = 3.6e-08, Sum P(2) = 3.6e-08
Identities = 13/29 (44%), Positives = 16/29 (55%)
Query: 639 GDYIASGSDDGRWFIWEKQTGRLIKMLLG 667
G Y+ASGS D IW Q+G L+ G
Sbjct: 463 GKYLASGSFDKCVHIWNTQSGTLVHSYRG 491
>MGI|MGI:1336172 [details] [associations]
symbol:Tbl1x "transducin (beta)-like 1 X-linked"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0003714 "transcription corepressor
activity" evidence=ISO;IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=ISO] [GO:0005667
"transcription factor complex" evidence=IDA] [GO:0005876 "spindle
microtubule" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006357 "regulation
of transcription from RNA polymerase II promoter" evidence=IGI]
[GO:0006508 "proteolysis" evidence=ISO] [GO:0007605 "sensory
perception of sound" evidence=ISO] [GO:0008013 "beta-catenin
binding" evidence=ISO] [GO:0008022 "protein C-terminus binding"
evidence=ISO] [GO:0008134 "transcription factor binding"
evidence=ISO] [GO:0017053 "transcriptional repressor complex"
evidence=ISO] [GO:0019904 "protein domain specific binding"
evidence=ISO] [GO:0042393 "histone binding" evidence=ISO]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IMP] [GO:0043627 "response to estrogen stimulus"
evidence=IMP] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO;IDA] [GO:0045444 "fat cell differentiation"
evidence=IMP] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO;IMP] [GO:0048545 "response to steroid hormone
stimulus" evidence=IMP] [GO:0060070 "canonical Wnt receptor
signaling pathway" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 MGI:MGI:1336172 GO:GO:0003714
GO:GO:0045892 GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0006351
GO:GO:0003682 GO:GO:0005667 GO:GO:0044212 GO:GO:0043627
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045444
GeneTree:ENSGT00690000102024 KO:K04508 HOGENOM:HOG000220902
OrthoDB:EOG412M5M CTD:6907 EMBL:AK030547 EMBL:AK031937
EMBL:AK038674 EMBL:BC043105 EMBL:F38006 IPI:IPI00223056
RefSeq:NP_065626.1 UniGene:Mm.258476 ProteinModelPortal:Q9QXE7
SMR:Q9QXE7 STRING:Q9QXE7 PhosphoSite:Q9QXE7 PaxDb:Q9QXE7
PRIDE:Q9QXE7 Ensembl:ENSMUST00000088217 GeneID:21372 KEGG:mmu:21372
InParanoid:Q9QXE7 NextBio:300588 Bgee:Q9QXE7 CleanEx:MM_TBL1X
Genevestigator:Q9QXE7 GermOnline:ENSMUSG00000025246 Uniprot:Q9QXE7
Length = 527
Score = 147 (56.8 bits), Expect = 3.7e-08, Sum P(2) = 3.7e-08
Identities = 41/135 (30%), Positives = 68/135 (50%)
Query: 2 ENFPFHDGSIYDMLDTRHTDTRPDVNHSLQMHSSLVRRLSQEREL---EGHQGCVNAISW 58
+ FPFH D+ D ++ T + + +H V RL +R + +GH VNAI W
Sbjct: 315 QQFPFHSAPALDV-DWQNNTTFASCSTDMCIH---VCRLGCDRPVKTFQGHTNEVNAIKW 370
Query: 59 NSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPE---TSDE----LVV 111
+ G LL S SDD + +WS +H ++ HS ++ K+ P TS+ ++
Sbjct: 371 DPSGMLLASCSDDMTLKIWSMKQDACVHDLQA-HSKEIYTIKWSPTGPATSNPNSNIMLA 429
Query: 112 SGAGDAEVRLFNLSR 126
S + D+ VRL+++ R
Sbjct: 430 SASFDSTVRLWDVER 444
Score = 59 (25.8 bits), Expect = 3.7e-08, Sum P(2) = 3.7e-08
Identities = 13/29 (44%), Positives = 16/29 (55%)
Query: 639 GDYIASGSDDGRWFIWEKQTGRLIKMLLG 667
G Y+ASGS D IW Q+G L+ G
Sbjct: 467 GKYLASGSFDKCVHIWNTQSGSLVHSYRG 495
>RGD|1563868 [details] [associations]
symbol:Tbl1x "transducin (beta)-like 1 X-linked" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003682 "chromatin binding"
evidence=IEA;ISO] [GO:0003714 "transcription corepressor activity"
evidence=IEA;ISO] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005667 "transcription
factor complex" evidence=IEA;ISO] [GO:0005876 "spindle microtubule"
evidence=ISO] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0006508 "proteolysis"
evidence=ISO] [GO:0007605 "sensory perception of sound"
evidence=ISO] [GO:0008013 "beta-catenin binding" evidence=ISO]
[GO:0008022 "protein C-terminus binding" evidence=ISO] [GO:0008134
"transcription factor binding" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0017053 "transcriptional
repressor complex" evidence=ISO] [GO:0019904 "protein domain
specific binding" evidence=ISO] [GO:0042393 "histone binding"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA;ISO] [GO:0043627 "response to
estrogen stimulus" evidence=IEA;ISO] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IEA;ISO] [GO:0045444 "fat
cell differentiation" evidence=IEA;ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA;ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0048545
"response to steroid hormone stimulus" evidence=ISO] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISO]
[GO:0000118 "histone deacetylase complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 RGD:1563868
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR013720 Pfam:PF08513 GeneTree:ENSGT00690000102024
KO:K04508 EMBL:CH473966 CTD:6907 RefSeq:NP_001100434.1
UniGene:Rn.107002 SMR:G3V6G5 Ensembl:ENSRNOT00000004901
GeneID:302711 KEGG:rno:302711 NextBio:650027 Uniprot:G3V6G5
Length = 527
Score = 147 (56.8 bits), Expect = 3.7e-08, Sum P(2) = 3.7e-08
Identities = 41/135 (30%), Positives = 68/135 (50%)
Query: 2 ENFPFHDGSIYDMLDTRHTDTRPDVNHSLQMHSSLVRRLSQEREL---EGHQGCVNAISW 58
+ FPFH D+ D ++ T + + +H V RL +R + +GH VNAI W
Sbjct: 315 QQFPFHSAPALDV-DWQNNTTFASCSTDMCIH---VCRLGCDRPVKTFQGHTNEVNAIKW 370
Query: 59 NSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPE---TSDE----LVV 111
+ G LL S SDD + +WS +H ++ HS ++ K+ P TS+ ++
Sbjct: 371 DPSGMLLASCSDDMTLKIWSMKQDACVHDLQA-HSKEIYTIKWSPTGPATSNPNSNIMLA 429
Query: 112 SGAGDAEVRLFNLSR 126
S + D+ VRL+++ R
Sbjct: 430 SASFDSTVRLWDVER 444
Score = 59 (25.8 bits), Expect = 3.7e-08, Sum P(2) = 3.7e-08
Identities = 13/29 (44%), Positives = 16/29 (55%)
Query: 639 GDYIASGSDDGRWFIWEKQTGRLIKMLLG 667
G Y+ASGS D IW Q+G L+ G
Sbjct: 467 GKYLASGSFDKCVHIWNTQSGSLVHSYRG 495
>UNIPROTKB|B7TCI5 [details] [associations]
symbol:TBL1X "Transducin beta-like 1" species:9913 "Bos
taurus" [GO:0006508 "proteolysis" evidence=ISS] [GO:0007605
"sensory perception of sound" evidence=ISS] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0003714 "transcription corepressor activity"
evidence=ISS] [GO:0008013 "beta-catenin binding" evidence=ISS]
[GO:0042393 "histone binding" evidence=ISS] [GO:0005876 "spindle
microtubule" evidence=ISS] [GO:0017053 "transcriptional repressor
complex" evidence=ISS] [GO:0045444 "fat cell differentiation"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0043627 "response to estrogen stimulus"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0017053 GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0006508
GO:GO:0003682 GO:GO:0005667 GO:GO:0000122 GO:GO:0044212
GO:GO:0007605 GO:GO:0043627 InterPro:IPR013720 Pfam:PF08513
GO:GO:0042393 GO:GO:0045444 GO:GO:0008013 GO:GO:0060070
GO:GO:0005876 GeneTree:ENSGT00690000102024 KO:K04508
HOGENOM:HOG000220902 HOVERGEN:HBG050240 OrthoDB:EOG412M5M CTD:6907
OMA:RAHSVNN EMBL:FJ195366 EMBL:DAAA02075574 IPI:IPI00717120
RefSeq:NP_001138704.1 UniGene:Bt.27699 STRING:B7TCI5
Ensembl:ENSBTAT00000024105 GeneID:515972 KEGG:bta:515972
NextBio:20872077 Uniprot:B7TCI5
Length = 528
Score = 147 (56.8 bits), Expect = 3.7e-08, Sum P(2) = 3.7e-08
Identities = 41/135 (30%), Positives = 68/135 (50%)
Query: 2 ENFPFHDGSIYDMLDTRHTDTRPDVNHSLQMHSSLVRRLSQEREL---EGHQGCVNAISW 58
+ FPFH D+ D ++ T + + +H V RL +R + +GH VNAI W
Sbjct: 316 QQFPFHSAPALDV-DWQNNTTFASCSTDMCIH---VCRLGCDRPVKTFQGHTNEVNAIKW 371
Query: 59 NSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPE---TSDE----LVV 111
+ G LL S SDD + +WS +H ++ HS ++ K+ P TS+ ++
Sbjct: 372 DPSGMLLASCSDDMTLKIWSMKQDTCVHDLQA-HSKEIYTIKWSPTGPATSNPNSSIMLA 430
Query: 112 SGAGDAEVRLFNLSR 126
S + D+ VRL+++ R
Sbjct: 431 SASFDSTVRLWDVER 445
Score = 59 (25.8 bits), Expect = 3.7e-08, Sum P(2) = 3.7e-08
Identities = 13/29 (44%), Positives = 16/29 (55%)
Query: 639 GDYIASGSDDGRWFIWEKQTGRLIKMLLG 667
G Y+ASGS D IW Q+G L+ G
Sbjct: 468 GKYLASGSFDKCVHIWNTQSGSLVHSYRG 496
>UNIPROTKB|O60907 [details] [associations]
symbol:TBL1X "F-box-like/WD repeat-containing protein
TBL1X" species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0060070 "canonical Wnt receptor
signaling pathway" evidence=IMP] [GO:0003714 "transcription
corepressor activity" evidence=IGI;IDA] [GO:0042393 "histone
binding" evidence=IDA] [GO:0017053 "transcriptional repressor
complex" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006508 "proteolysis" evidence=IMP] [GO:0008022 "protein
C-terminus binding" evidence=IPI] [GO:0005876 "spindle microtubule"
evidence=IDA] [GO:0000118 "histone deacetylase complex"
evidence=IDA] [GO:0019904 "protein domain specific binding"
evidence=IPI] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0007605 "sensory
perception of sound" evidence=IMP] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=IDA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IDA] [GO:0008013 "beta-catenin binding"
evidence=IPI] [GO:0008134 "transcription factor binding"
evidence=IPI] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent
protein catabolic process" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0007219 "Notch signaling pathway" evidence=TAS] [GO:0044255
"cellular lipid metabolic process" evidence=TAS] [GO:0044281 "small
molecule metabolic process" evidence=TAS] Reactome:REACT_111217
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Reactome:REACT_111102
GO:GO:0017053 GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0044281
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0007219 GO:GO:0044255 GO:GO:0006351 GO:GO:0000122
GO:GO:0044212 GO:GO:0007605 InterPro:IPR013720 Pfam:PF08513
GO:GO:0042393 GO:GO:0060070 GO:GO:0005876 KO:K04508 EMBL:AC003036
HOGENOM:HOG000220902 HOVERGEN:HBG050240 OrthoDB:EOG412M5M
EMBL:Y12781 EMBL:AK289409 EMBL:AK290962 EMBL:BC032708 EMBL:BC052304
IPI:IPI00218132 IPI:IPI00640917 RefSeq:NP_001132938.1
RefSeq:NP_001132939.1 RefSeq:NP_001132940.1 RefSeq:NP_005638.1
UniGene:Hs.495656 PDB:2XTC PDB:2XTD PDB:2XTE PDBsum:2XTC
PDBsum:2XTD PDBsum:2XTE ProteinModelPortal:O60907 SMR:O60907
IntAct:O60907 STRING:O60907 PhosphoSite:O60907 PaxDb:O60907
PRIDE:O60907 Ensembl:ENST00000217964 Ensembl:ENST00000380961
Ensembl:ENST00000407597 Ensembl:ENST00000424279
Ensembl:ENST00000536365 GeneID:6907 KEGG:hsa:6907 UCSC:uc004csq.4
CTD:6907 GeneCards:GC0XP009431 HGNC:HGNC:11585 HPA:CAB005363
MIM:300196 neXtProt:NX_O60907 PharmGKB:PA36349 InParanoid:O60907
OMA:RAHSVNN PhylomeDB:O60907 ChiTaRS:TBL1X EvolutionaryTrace:O60907
GenomeRNAi:6907 NextBio:27011 ArrayExpress:O60907 Bgee:O60907
CleanEx:HS_TBL1X Genevestigator:O60907 GermOnline:ENSG00000101849
Uniprot:O60907
Length = 577
Score = 147 (56.8 bits), Expect = 3.9e-08, Sum P(2) = 3.9e-08
Identities = 40/135 (29%), Positives = 68/135 (50%)
Query: 2 ENFPFHDGSIYDMLDTRHTDTRPDVNHSLQMHSSLVRRLSQEREL---EGHQGCVNAISW 58
+ FPFH D+ D ++ T + + +H V RL +R + +GH VNAI W
Sbjct: 365 QQFPFHSAPALDV-DWQNNTTFASCSTDMCIH---VCRLGCDRPVKTFQGHTNEVNAIKW 420
Query: 59 NSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPE---TSDE----LVV 111
+ G LL S SDD + +WS +H ++ H+ ++ K+ P TS+ ++
Sbjct: 421 DPSGMLLASCSDDMTLKIWSMKQEVCIHDLQA-HNKEIYTIKWSPTGPATSNPNSNIMLA 479
Query: 112 SGAGDAEVRLFNLSR 126
S + D+ VRL+++ R
Sbjct: 480 SASFDSTVRLWDIER 494
Score = 60 (26.2 bits), Expect = 3.9e-08, Sum P(2) = 3.9e-08
Identities = 13/29 (44%), Positives = 16/29 (55%)
Query: 639 GDYIASGSDDGRWFIWEKQTGRLIKMLLG 667
G Y+ASGS D IW Q+G L+ G
Sbjct: 517 GKYLASGSFDKCVHIWNTQSGNLVHSYRG 545
>ASPGD|ASPL0000006214 [details] [associations]
symbol:AN6385 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301
InterPro:IPR011047 SUPFAM:SSF50998 EMBL:AACD01000108
HOGENOM:HOG000091642 RefSeq:XP_663989.1 ProteinModelPortal:Q5AZ95
EnsemblFungi:CADANIAT00006594 GeneID:2871285 KEGG:ani:AN6385.2
OMA:LHPFEGH OrthoDB:EOG42NN9D Uniprot:Q5AZ95
Length = 434
Score = 144 (55.7 bits), Expect = 4.2e-08, Sum P(2) = 4.2e-08
Identities = 59/209 (28%), Positives = 97/209 (46%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPET 105
LEGH + ++++ G LL SGS+DT I +W +S L ++E GHS++V F P
Sbjct: 37 LEGHSDWIETVTFSPDGRLLASGSNDTTIKLWDPASGGLKQTLE-GHSSSVQSVAFSP-- 93
Query: 106 SDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAV----EVGNPH 161
+ +L+ SG+ D ++L+N + S + + H+ RV+ +A ++ NP
Sbjct: 94 NGQLLASGSSDTTIKLWNSASDSLKHTMEG----------HSDRVESVAFSPNGQLWNPA 143
Query: 162 VVWSASEDGTLRQH-DFRQGSSCPPAG---SSHQECRNILL--DLRCGAKRSLADPPKQT 215
+ S T+ H D+ + P G +S + I L CG K +L
Sbjct: 144 I---GSLKHTIEGHSDWVLSVAFSPDGQLLASGSAEKTIKLWDSATCGLKHTLGGHSNWV 200
Query: 216 LSLKSCDISSTRPHLLLVGGSDAFARLYD 244
L L + S LL G +DA +L+D
Sbjct: 201 LPL----VFSPDGRLLASGSNDATIKLWD 225
Score = 130 (50.8 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 27/83 (32%), Positives = 49/83 (59%)
Query: 41 SQERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTK 100
S + LEGH + +++++ G LL SGS D I +W ++ H+++ GHS V
Sbjct: 230 SLKHTLEGHSNKIESLAFSPNGQLLASGSSDATIKLWDTATGSFRHTLK-GHSDMVLSVV 288
Query: 101 FVPETSDELVVSGAGDAEVRLFN 123
F P++ +L+ SG+GD ++L++
Sbjct: 289 FSPDS--QLLESGSGDNTIKLWD 309
Score = 121 (47.7 bits), Expect = 0.00018, Sum P(3) = 0.00018
Identities = 25/61 (40%), Positives = 37/61 (60%)
Query: 43 ERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFV 102
++ LEGH V +++++ G LL SGS DT I +W+ +S L H++E GHS V F
Sbjct: 76 KQTLEGHSSSVQSVAFSPNGQLLASGSSDTTIKLWNSASDSLKHTME-GHSDRVESVAFS 134
Query: 103 P 103
P
Sbjct: 135 P 135
Score = 59 (25.8 bits), Expect = 4.2e-08, Sum P(2) = 4.2e-08
Identities = 17/53 (32%), Positives = 23/53 (43%)
Query: 615 MKQRYVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLG 667
+K GH N I+ +F G +ASGS D +W+ TG L G
Sbjct: 231 LKHTLEGHSN---KIESLAF-SPNGQLLASGSSDATIKLWDTATGSFRHTLKG 279
Score = 50 (22.7 bits), Expect = 3.5e-07, Sum P(2) = 3.5e-07
Identities = 14/39 (35%), Positives = 20/39 (51%)
Query: 639 GDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAGNVISSM 677
G +ASGS+D +W+ +G L L G N I S+
Sbjct: 209 GRLLASGSNDATIKLWDPPSGSLKHTLEGHS--NKIESL 245
Score = 49 (22.3 bits), Expect = 5.5e-07, Sum P(3) = 5.5e-07
Identities = 22/70 (31%), Positives = 35/70 (50%)
Query: 271 HLSEHGRSSLHLTHVTFSPNGEEVLLSYSGEHVYLMDVNHAGGRAMRYTV-GDASKIMS- 328
H E G S+ + + FSPNG+ + S + L D A G + R+T+ G + ++S
Sbjct: 233 HTLE-GHSN-KIESLAFSPNGQLLASGSSDATIKLWDT--ATG-SFRHTLKGHSDMVLSV 287
Query: 329 -FTPTLNGLE 337
F+P LE
Sbjct: 288 VFSPDSQLLE 297
Score = 43 (20.2 bits), Expect = 0.00069, Sum P(3) = 0.00069
Identities = 19/45 (42%), Positives = 22/45 (48%)
Query: 208 LADPP----KQTLSLKSCDISSTR--PH--LLLVGGSDAFARLYD 244
L DPP K TL S I S P+ LL G SDA +L+D
Sbjct: 223 LWDPPSGSLKHTLEGHSNKIESLAFSPNGQLLASGSSDATIKLWD 267
Score = 38 (18.4 bits), Expect = 5.5e-07, Sum P(3) = 5.5e-07
Identities = 8/20 (40%), Positives = 11/20 (55%)
Query: 642 IASGSDDGRWFIWEKQTGRL 661
+ SGS D +W+ TG L
Sbjct: 296 LESGSGDNTIKLWDPATGIL 315
>TAIR|locus:2097435 [details] [associations]
symbol:WDR5a "AT3G49660" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=ISS] [GO:0010228 "vegetative
to reproductive phase transition of meristem" evidence=IMP]
[GO:0042393 "histone binding" evidence=IDA] [GO:0048188
"Set1C/COMPASS complex" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AL132965 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010228 GO:GO:0042393
GO:GO:0048188 HSSP:P16649 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT IPI:IPI00547190 PIR:T46032 RefSeq:NP_190535.1
UniGene:At.35578 ProteinModelPortal:Q9M2Z2 SMR:Q9M2Z2 PaxDb:Q9M2Z2
PRIDE:Q9M2Z2 EnsemblPlants:AT3G49660.1 GeneID:824128
KEGG:ath:AT3G49660 TAIR:At3g49660 InParanoid:Q9M2Z2
PhylomeDB:Q9M2Z2 ProtClustDB:CLSN2684254 Genevestigator:Q9M2Z2
Uniprot:Q9M2Z2
Length = 317
Score = 125 (49.1 bits), Expect = 5.2e-08, Sum P(3) = 5.2e-08
Identities = 22/82 (26%), Positives = 50/82 (60%)
Query: 44 RELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVP 103
+E GH+ ++ ++++S ++S SDD + +W + L+ ++ GH+ FC F P
Sbjct: 65 QEFTGHENGISDVAFSSDARFIVSASDDKTLKLWDVETGSLIKTL-IGHTNYAFCVNFNP 123
Query: 104 ETSDELVVSGAGDAEVRLFNLS 125
+++ ++VSG+ D VR+++++
Sbjct: 124 QSN--MIVSGSFDETVRIWDVT 143
Score = 89 (36.4 bits), Expect = 0.00057, Sum P(3) = 0.00057
Identities = 31/126 (24%), Positives = 60/126 (47%)
Query: 1 MENFPFHDGSIYDML---DTRHTDTRPDVNHSLQMHSSLVRRLSQERELEGHQGCVNAIS 57
++ F H+ I D+ D R + D + +L++ V S + L GH ++
Sbjct: 64 VQEFTGHENGISDVAFSSDARFIVSASD-DKTLKLWD--VETGSLIKTLIGHTNYAFCVN 120
Query: 58 WNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPETSDELVVSGAGDA 117
+N + ++++SGS D + +W ++ K L + HS V F + S L+VS + D
Sbjct: 121 FNPQSNMIVSGSFDETVRIWDVTTGKCL-KVLPAHSDPVTAVDFNRDGS--LIVSSSYDG 177
Query: 118 EVRLFN 123
R+++
Sbjct: 178 LCRIWD 183
Score = 69 (29.3 bits), Expect = 5.2e-08, Sum P(3) = 5.2e-08
Identities = 18/49 (36%), Positives = 24/49 (48%)
Query: 619 YVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLG 667
Y GH N I A F G I SGS+D +WE + +L++ L G
Sbjct: 236 YTGHVNAQYCISSA-FSVTNGKRIVSGSEDNCVHMWELNSKKLLQKLEG 283
Score = 67 (28.6 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 14/31 (45%), Positives = 17/31 (54%)
Query: 639 GDYIASGSDDGRWFIWEKQTGRLIKMLLGDE 669
G I S S DG IW+ TG +K L+ DE
Sbjct: 167 GSLIVSSSYDGLCRIWDSGTGHCVKTLIDDE 197
Score = 42 (19.8 bits), Expect = 5.2e-08, Sum P(3) = 5.2e-08
Identities = 9/30 (30%), Positives = 18/30 (60%)
Query: 282 LTHVTFSPNGEEVLLSYSGEHVYLMDVNHA 311
++ V FSPNG+ +L+ + L +++ A
Sbjct: 201 VSFVRFSPNGKFILVGTLDNTLRLWNISSA 230
Score = 40 (19.1 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 16/62 (25%), Positives = 25/62 (40%)
Query: 621 GHCN---VGTDIKQASFL--GQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGD-EAGNVI 674
GHC + + SF+ G +I G+ D +W + + +K G A I
Sbjct: 187 GHCVKTLIDDENPPVSFVRFSPNGKFILVGTLDNTLRLWNISSAKFLKTYTGHVNAQYCI 246
Query: 675 SS 676
SS
Sbjct: 247 SS 248
>MGI|MGI:2444785 [details] [associations]
symbol:Dcaf5 "DDB1 and CUL4 associated factor 5"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0008150
"biological_process" evidence=ND] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 UniPathway:UPA00143 MGI:MGI:2444785 GO:GO:0005739
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319
GO:GO:0016567 GO:GO:0080008 CTD:8816 HOGENOM:HOG000060080
HOVERGEN:HBG057544 KO:K11800 OMA:YIGEDNY OrthoDB:EOG44MXRG
EMBL:AK122561 EMBL:BC030857 EMBL:BC042567 EMBL:BC046813
EMBL:AK034653 EMBL:AK077889 IPI:IPI00340504 RefSeq:NP_796241.3
UniGene:Mm.220310 UniGene:Mm.447547 ProteinModelPortal:Q80T85
SMR:Q80T85 STRING:Q80T85 PhosphoSite:Q80T85 PaxDb:Q80T85
PRIDE:Q80T85 Ensembl:ENSMUST00000054145 GeneID:320808
KEGG:mmu:320808 GeneTree:ENSGT00530000062951 InParanoid:Q80T85
NextBio:397479 Bgee:Q80T85 CleanEx:MM_WDR22 Genevestigator:Q80T85
GermOnline:ENSMUSG00000049106 Uniprot:Q80T85
Length = 946
Score = 141 (54.7 bits), Expect = 6.0e-08, Sum P(2) = 6.0e-08
Identities = 52/181 (28%), Positives = 79/181 (43%)
Query: 10 SIYDMLDTRHTDTRPDVNHSLQMHSSLVRRLSQERELEGHQGCVNAISW-NSKGSLLISG 68
S+ L R P + Q R +++L GH GCVNAI + N+ G L+SG
Sbjct: 13 SVVGFLSQRGLHGDPLLTQDFQRRRLRGCRNLYKKDLLGHFGCVNAIEFSNNGGQWLVSG 72
Query: 69 SDDTHINVW----SYSSRKLLHSIETGHSANVFCTKFVPETSDELVVSGAGDAEVRLFNL 124
DD + +W + SR ++ H +N+FC F + + V SG D +V L ++
Sbjct: 73 GDDRRVLLWHMEQAIHSRVKPIQLKGEHHSNIFCLAF--NSGNTKVFSGGNDEQVILHDV 130
Query: 125 SRFSGRGLDDNAITPSALYQCHTRRVKKLAVEVGNPHVVWSASEDGTLRQHDFRQGSSCP 184
S LD A H V L+V N ++ S+S+DG + D R+
Sbjct: 131 E--SSETLDVFA---------HEDAVYGLSVSPVNDNIFASSSDDGRVLIWDIRESPHGE 179
Query: 185 P 185
P
Sbjct: 180 P 180
Score = 70 (29.7 bits), Expect = 6.0e-08, Sum P(2) = 6.0e-08
Identities = 15/35 (42%), Positives = 20/35 (57%)
Query: 621 GHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWE 655
G+ N T +K F G R YI SGSDD ++W+
Sbjct: 275 GYFNSCT-MKSCCFAGDRDQYILSGSDDFNLYMWK 308
Score = 40 (19.1 bits), Expect = 0.00018, Sum P(3) = 0.00018
Identities = 11/27 (40%), Positives = 15/27 (55%)
Query: 217 SLKSCDISSTRPHLLLVGGSDAFARLY 243
++KSC + R +L GSD F LY
Sbjct: 281 TMKSCCFAGDRDQYIL-SGSDDF-NLY 305
Score = 39 (18.8 bits), Expect = 0.00018, Sum P(3) = 0.00018
Identities = 16/60 (26%), Positives = 21/60 (35%)
Query: 472 PSNSVMAEKVENIKKHIXXXXXXXXXXXXDGGARSEPRTGRVLSLSDIIYRSEANSDASQ 531
PS+S +E E + + AR E TG S + Y E N D Q
Sbjct: 562 PSSSTSSEDEEELNQRRATTRQRNAMRRRQKTARDERPTGPAKSTNT--YIGEDNYDYPQ 619
>UNIPROTKB|G3V6K4 [details] [associations]
symbol:Dcaf5 "Protein Dcaf5" species:10116 "Rattus
norvegicus" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0080008
"Cul4-RING ubiquitin ligase complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1306535 Gene3D:2.130.10.10 SUPFAM:SSF50978 EMBL:CH473947
CTD:8816 KO:K11800 OMA:YIGEDNY GeneTree:ENSGT00530000062951
RefSeq:NP_001094188.1 UniGene:Rn.47944 ProteinModelPortal:G3V6K4
Ensembl:ENSRNOT00000006005 GeneID:314273 KEGG:rno:314273
NextBio:667391 Uniprot:G3V6K4
Length = 946
Score = 141 (54.7 bits), Expect = 6.0e-08, Sum P(2) = 6.0e-08
Identities = 52/181 (28%), Positives = 79/181 (43%)
Query: 10 SIYDMLDTRHTDTRPDVNHSLQMHSSLVRRLSQERELEGHQGCVNAISW-NSKGSLLISG 68
S+ L R P + Q R +++L GH GCVNAI + N+ G L+SG
Sbjct: 13 SVVGFLSQRGLHGDPLLTQDFQRRRLRGCRNLYKKDLLGHFGCVNAIEFSNNGGQWLVSG 72
Query: 69 SDDTHINVW----SYSSRKLLHSIETGHSANVFCTKFVPETSDELVVSGAGDAEVRLFNL 124
DD + +W + SR ++ H +N+FC F + + V SG D +V L ++
Sbjct: 73 GDDRRVLLWHMEQAIHSRVKPIQLKGEHHSNIFCLAF--NSGNTKVFSGGNDEQVILHDV 130
Query: 125 SRFSGRGLDDNAITPSALYQCHTRRVKKLAVEVGNPHVVWSASEDGTLRQHDFRQGSSCP 184
S LD A H V L+V N ++ S+S+DG + D R+
Sbjct: 131 E--SSETLDVFA---------HEDAVYGLSVSPVNDNIFASSSDDGRVLIWDIRESPHGE 179
Query: 185 P 185
P
Sbjct: 180 P 180
Score = 70 (29.7 bits), Expect = 6.0e-08, Sum P(2) = 6.0e-08
Identities = 15/35 (42%), Positives = 20/35 (57%)
Query: 621 GHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWE 655
G+ N T +K F G R YI SGSDD ++W+
Sbjct: 275 GYFNSCT-MKSCCFAGDRDQYILSGSDDFNLYMWK 308
Score = 40 (19.1 bits), Expect = 7.0e-05, Sum P(2) = 7.0e-05
Identities = 11/27 (40%), Positives = 15/27 (55%)
Query: 217 SLKSCDISSTRPHLLLVGGSDAFARLY 243
++KSC + R +L GSD F LY
Sbjct: 281 TMKSCCFAGDRDQYIL-SGSDDF-NLY 305
>UNIPROTKB|Q96JK2 [details] [associations]
symbol:DCAF5 "DDB1- and CUL4-associated factor 5"
species:9606 "Homo sapiens" [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA;IC]
[GO:0080008 "Cul4-RING ubiquitin ligase complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
UniPathway:UPA00143 GO:GO:0005739 EMBL:CH471061 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319 GO:GO:0016567
GO:GO:0080008 EMBL:AB058727 EMBL:AL831932 EMBL:AL831823
EMBL:BC136632 EMBL:AF044774 IPI:IPI00382979 IPI:IPI00783277
RefSeq:NP_003852.1 UniGene:Hs.509780 PDB:3I89 PDBsum:3I89
ProteinModelPortal:Q96JK2 SMR:Q96JK2 DIP:DIP-48763N IntAct:Q96JK2
STRING:Q96JK2 PhosphoSite:Q96JK2 DMDM:47606200 PaxDb:Q96JK2
PRIDE:Q96JK2 Ensembl:ENST00000341516 Ensembl:ENST00000554215
Ensembl:ENST00000556847 GeneID:8816 KEGG:hsa:8816 UCSC:uc001xkp.3
CTD:8816 GeneCards:GC14M069517 HGNC:HGNC:20224 MIM:603812
neXtProt:NX_Q96JK2 PharmGKB:PA165478844 HOGENOM:HOG000060080
HOVERGEN:HBG057544 InParanoid:Q96JK2 KO:K11800 OMA:YIGEDNY
OrthoDB:EOG44MXRG ChiTaRS:DCAF5 EvolutionaryTrace:Q96JK2
GenomeRNAi:8816 NextBio:33070 ArrayExpress:Q96JK2 Bgee:Q96JK2
CleanEx:HS_WDR22 Genevestigator:Q96JK2 GermOnline:ENSG00000139990
Uniprot:Q96JK2
Length = 942
Score = 141 (54.7 bits), Expect = 7.5e-08, Sum P(2) = 7.5e-08
Identities = 52/181 (28%), Positives = 79/181 (43%)
Query: 10 SIYDMLDTRHTDTRPDVNHSLQMHSSLVRRLSQERELEGHQGCVNAISW-NSKGSLLISG 68
S+ L R P + Q R +++L GH GCVNAI + N+ G L+SG
Sbjct: 13 SVVGFLSQRGLHGDPLLTQDFQRRRLRGCRNLYKKDLLGHFGCVNAIEFSNNGGQWLVSG 72
Query: 69 SDDTHINVW----SYSSRKLLHSIETGHSANVFCTKFVPETSDELVVSGAGDAEVRLFNL 124
DD + +W + SR ++ H +N+FC F + + V SG D +V L ++
Sbjct: 73 GDDRRVLLWHMEQAIHSRVKPIQLKGEHHSNIFCLAF--NSGNTKVFSGGNDEQVILHDV 130
Query: 125 SRFSGRGLDDNAITPSALYQCHTRRVKKLAVEVGNPHVVWSASEDGTLRQHDFRQGSSCP 184
S LD A H V L+V N ++ S+S+DG + D R+
Sbjct: 131 E--SSETLDVFA---------HEDAVYGLSVSPVNDNIFASSSDDGRVLIWDIRESPHGE 179
Query: 185 P 185
P
Sbjct: 180 P 180
Score = 69 (29.3 bits), Expect = 7.5e-08, Sum P(2) = 7.5e-08
Identities = 15/34 (44%), Positives = 19/34 (55%)
Query: 621 GHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIW 654
G+ N T +K F G R YI SGSDD ++W
Sbjct: 275 GYFNSCT-MKSCCFAGDRDQYILSGSDDFNLYMW 307
Score = 40 (19.1 bits), Expect = 7.0e-05, Sum P(2) = 7.0e-05
Identities = 11/27 (40%), Positives = 15/27 (55%)
Query: 217 SLKSCDISSTRPHLLLVGGSDAFARLY 243
++KSC + R +L GSD F LY
Sbjct: 281 TMKSCCFAGDRDQYIL-SGSDDF-NLY 305
>UNIPROTKB|E2QXZ3 [details] [associations]
symbol:DCAF5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005739 Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0080008
CTD:8816 KO:K11800 OMA:YIGEDNY GeneTree:ENSGT00530000062951
EMBL:AAEX03005804 EMBL:AAEX03005805 EMBL:AAEX03005806
RefSeq:XP_547871.3 Ensembl:ENSCAFT00000026219 GeneID:490749
KEGG:cfa:490749 Uniprot:E2QXZ3
Length = 947
Score = 141 (54.7 bits), Expect = 7.6e-08, Sum P(2) = 7.6e-08
Identities = 52/181 (28%), Positives = 79/181 (43%)
Query: 10 SIYDMLDTRHTDTRPDVNHSLQMHSSLVRRLSQERELEGHQGCVNAISW-NSKGSLLISG 68
S+ L R P + Q R +++L GH GCVNAI + N+ G L+SG
Sbjct: 13 SVVGFLSQRGLHGDPLLTQDFQRRRLRGCRNLYKKDLLGHFGCVNAIEFSNNGGQWLVSG 72
Query: 69 SDDTHINVW----SYSSRKLLHSIETGHSANVFCTKFVPETSDELVVSGAGDAEVRLFNL 124
DD + +W + SR ++ H +N+FC F + + V SG D +V L ++
Sbjct: 73 GDDRRVLLWHMEQAIHSRVKPIQLKGEHHSNIFCLAF--NSGNTKVFSGGNDEQVILHDV 130
Query: 125 SRFSGRGLDDNAITPSALYQCHTRRVKKLAVEVGNPHVVWSASEDGTLRQHDFRQGSSCP 184
S LD A H V L+V N ++ S+S+DG + D R+
Sbjct: 131 E--SSETLDVFA---------HEDAVYGLSVSPVNDNIFASSSDDGRVLIWDIRESPHGE 179
Query: 185 P 185
P
Sbjct: 180 P 180
Score = 69 (29.3 bits), Expect = 7.6e-08, Sum P(2) = 7.6e-08
Identities = 15/34 (44%), Positives = 19/34 (55%)
Query: 621 GHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIW 654
G+ N T +K F G R YI SGSDD ++W
Sbjct: 275 GYFNSCT-MKSCCFAGDRDQYILSGSDDFNLYMW 307
Score = 40 (19.1 bits), Expect = 7.1e-05, Sum P(2) = 7.1e-05
Identities = 11/27 (40%), Positives = 15/27 (55%)
Query: 217 SLKSCDISSTRPHLLLVGGSDAFARLY 243
++KSC + R +L GSD F LY
Sbjct: 281 TMKSCCFAGDRDQYIL-SGSDDF-NLY 305
>UNIPROTKB|Q4R8H1 [details] [associations]
symbol:TBL1X "F-box-like/WD repeat-containing protein
TBL1X" species:9541 "Macaca fascicularis" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0003714 "transcription corepressor activity"
evidence=ISS] [GO:0005876 "spindle microtubule" evidence=ISS]
[GO:0006508 "proteolysis" evidence=ISS] [GO:0007605 "sensory
perception of sound" evidence=ISS] [GO:0008013 "beta-catenin
binding" evidence=ISS] [GO:0017053 "transcriptional repressor
complex" evidence=ISS] [GO:0042393 "histone binding" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0017053
GO:GO:0003714 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0006508 GO:GO:0006351 GO:GO:0000122 GO:GO:0007605
InterPro:IPR013720 Pfam:PF08513 GO:GO:0042393 GO:GO:0008013
GO:GO:0060070 GO:GO:0005876 HSSP:P16649 EMBL:AB168481
ProteinModelPortal:Q4R8H1 Uniprot:Q4R8H1
Length = 569
Score = 145 (56.1 bits), Expect = 7.8e-08, Sum P(2) = 7.8e-08
Identities = 40/135 (29%), Positives = 68/135 (50%)
Query: 2 ENFPFHDGSIYDMLDTRHTDTRPDVNHSLQMHSSLVRRLSQEREL---EGHQGCVNAISW 58
+ FPFH D+ D ++ T + + +H V RL +R + +GH VNAI W
Sbjct: 357 QQFPFHSAPALDV-DWQNNMTFASCSTDMCIH---VCRLGCDRPVKTFQGHTNEVNAIKW 412
Query: 59 NSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPE---TSDE----LVV 111
+ G LL S SDD + +WS +H ++ H+ ++ K+ P TS+ ++
Sbjct: 413 DPSGMLLASCSDDMTLKIWSMKQEVCIHDLQA-HNKEIYTIKWSPTGPATSNPNSNIMLA 471
Query: 112 SGAGDAEVRLFNLSR 126
S + D+ VRL+++ R
Sbjct: 472 SASFDSTVRLWDIER 486
Score = 59 (25.8 bits), Expect = 7.8e-08, Sum P(2) = 7.8e-08
Identities = 13/29 (44%), Positives = 16/29 (55%)
Query: 639 GDYIASGSDDGRWFIWEKQTGRLIKMLLG 667
G Y+ASGS D IW Q+G L+ G
Sbjct: 509 GRYLASGSFDKCVHIWNTQSGNLVHSYRG 537
>UNIPROTKB|F1NYZ8 [details] [associations]
symbol:TBL1XR1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000118 "histone deacetylase complex"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0005876
"spindle microtubule" evidence=IEA] [GO:0008013 "beta-catenin
binding" evidence=IEA] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0044212 "transcription regulatory region
DNA binding" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0047485 "protein N-terminus binding" evidence=IEA] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0017053
GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0000122 GO:GO:0044212 InterPro:IPR011047 SUPFAM:SSF50998
InterPro:IPR013720 Pfam:PF08513 GO:GO:0060070 GO:GO:0005876
GO:GO:0000118 GeneTree:ENSGT00690000102024 EMBL:AADN02020878
EMBL:AADN02020879 EMBL:AADN02020880 EMBL:AADN02020881
EMBL:AADN02020882 EMBL:AADN02020883 EMBL:AADN02020884
EMBL:AADN02020885 EMBL:AADN02020886 EMBL:AADN02020887
EMBL:AADN02020888 EMBL:AADN02020889 EMBL:AADN02020890
EMBL:AADN02020891 EMBL:AADN02020892 EMBL:AADN02020893
EMBL:AADN02020894 EMBL:AADN02020895 EMBL:AADN02020896
EMBL:AADN02020897 EMBL:AADN02020898 IPI:IPI00594570
Ensembl:ENSGALT00000001912 ArrayExpress:F1NYZ8 Uniprot:F1NYZ8
Length = 517
Score = 140 (54.3 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 32/105 (30%), Positives = 54/105 (51%)
Query: 2 ENFPFHDGSIYDMLDTRHTDTRPDVNHSLQMHSSLVRRLSQEREL---EGHQGCVNAISW 58
+ FPFH D+ D + +T + + +H V +L Q+R + +GH VNAI W
Sbjct: 302 QQFPFHSAPALDV-DWQSNNTFASCSTDMCIH---VCKLGQDRPIKTFQGHTNEVNAIKW 357
Query: 59 NSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVP 103
+ G+LL S SDD + +WS +H ++ H+ ++ K+ P
Sbjct: 358 DPTGNLLASCSDDMTLKIWSMKQDSCVHDLQA-HNKEIYTIKWSP 401
Score = 62 (26.9 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 14/29 (48%), Positives = 16/29 (55%)
Query: 639 GDYIASGSDDGRWFIWEKQTGRLIKMLLG 667
G Y+ASGS D IW QTG L+ G
Sbjct: 457 GRYLASGSFDKCVHIWNTQTGALVHSYRG 485
>ZFIN|ZDB-GENE-040426-1192 [details] [associations]
symbol:tbl1xr1 "transducin (beta)-like 1 X-linked
receptor 1" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040426-1192
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR013720 Pfam:PF08513 GeneTree:ENSGT00690000102024
EMBL:CT027646 IPI:IPI00854144 Ensembl:ENSDART00000085132
Bgee:F1Q5U2 Uniprot:F1Q5U2
Length = 511
Score = 146 (56.5 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 42/136 (30%), Positives = 68/136 (50%)
Query: 2 ENFPFHDGSIYDMLDTRHTDTRPDVNHSLQMHSSLVRRLSQEREL---EGHQGCVNAISW 58
+ FPFH D+ D + +T + + +H V +L QER + +GH VNAI W
Sbjct: 298 QQFPFHSAPALDV-DWQSNNTFASCSTDMCIH---VCKLGQERPIKTFQGHTNEVNAIKW 353
Query: 59 NSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPE---TSDE-----LV 110
+ G+LL S SDD + +WS +H ++ HS ++ K+ P T++ L
Sbjct: 354 DPTGNLLASCSDDMTLKLWSMKQDTCVHDLQA-HSKEIYTIKWSPTGPGTNNPNANLMLA 412
Query: 111 VSGAGDAEVRLFNLSR 126
S + D+ VRL++ R
Sbjct: 413 RSASFDSTVRLWDAER 428
Score = 54 (24.1 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 12/29 (41%), Positives = 16/29 (55%)
Query: 639 GDYIASGSDDGRWFIWEKQTGRLIKMLLG 667
G ++ASGS D IW Q+G L+ G
Sbjct: 451 GRHLASGSFDKCVHIWNTQSGALVNSYRG 479
>UNIPROTKB|Q8N136 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9606 "Homo sapiens" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC073065 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:AK097409 EMBL:AK098821 EMBL:AK127882
EMBL:BC036377 IPI:IPI00166063 IPI:IPI00444233 RefSeq:NP_849143.1
UniGene:Hs.424594 ProteinModelPortal:Q8N136 SMR:Q8N136
PhosphoSite:Q8N136 DMDM:74759762 PRIDE:Q8N136
Ensembl:ENST00000309931 GeneID:164781 KEGG:hsa:164781
UCSC:uc002vpn.1 GeneCards:GC02P228735 HGNC:HGNC:26383 HPA:HPA046118
neXtProt:NX_Q8N136 PharmGKB:PA142670602 InParanoid:Q8N136
OMA:RKCISKL PhylomeDB:Q8N136 GenomeRNAi:164781 NextBio:88498
ArrayExpress:Q8N136 Bgee:Q8N136 CleanEx:HS_WDR69
Genevestigator:Q8N136 GermOnline:ENSG00000123977 Uniprot:Q8N136
Length = 415
Score = 124 (48.7 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 27/80 (33%), Positives = 47/80 (58%)
Query: 46 LEGHQGCVNAISWNSK-GSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPE 104
LEGH+ V AI++N+ G + +GS D +WS + K H+ GH+A + C F P+
Sbjct: 130 LEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGKCYHTFR-GHTAEIVCLSFNPQ 188
Query: 105 TSDELVVSGAGDAEVRLFNL 124
++ LV +G+ D +L+++
Sbjct: 189 ST--LVATGSMDTTAKLWDI 206
Score = 74 (31.1 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 22/65 (33%), Positives = 32/65 (49%)
Query: 621 GHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAGNVISSME-E 679
GH +I SF GD I +GS D +W+ TGR + +L+G A +S +
Sbjct: 217 GH---SAEIISLSF-NTSGDRIITGSFDHTVVVWDADTGRKVNILIGHCAEISSASFNWD 272
Query: 680 CGLLL 684
C L+L
Sbjct: 273 CSLIL 277
Score = 68 (29.0 bits), Expect = 6.7e-07, Sum P(2) = 6.7e-07
Identities = 15/40 (37%), Positives = 26/40 (65%)
Query: 628 DIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLG 667
+I + SF Q G+++ +GS D IW+ QTG+ +++L G
Sbjct: 347 EISKISFNPQ-GNHLLTGSSDKTARIWDAQTGQCLQVLEG 385
Score = 59 (25.8 bits), Expect = 5.6e-06, Sum P(2) = 5.6e-06
Identities = 18/65 (27%), Positives = 29/65 (44%)
Query: 620 VGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAGNVISSMEE 679
+GHC +I ASF I +GS D +W+ G+ + L G + + S +
Sbjct: 258 IGHC---AEISSASF-NWDCSLILTGSMDKTCKLWDATNGKCVATLTGHDDEILDSCFDY 313
Query: 680 CGLLL 684
G L+
Sbjct: 314 TGKLI 318
Score = 42 (19.8 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 10/47 (21%), Positives = 22/47 (46%)
Query: 282 LTHVTFSPNGEEVLLSYSGEHVYLMDVNHAGGRAMRYTVGDASKIMS 328
++ ++F+P G +L S + + D G+ ++ G +I S
Sbjct: 348 ISKISFNPQGNHLLTGSSDKTARIWDAQT--GQCLQVLEGHTDEIFS 392
Score = 40 (19.1 bits), Expect = 0.00048, Sum P(2) = 0.00048
Identities = 8/14 (57%), Positives = 10/14 (71%)
Query: 231 LLVGGSDAFARLYD 244
LL G SD AR++D
Sbjct: 360 LLTGSSDKTARIWD 373
Score = 40 (19.1 bits), Expect = 0.00048, Sum P(2) = 0.00048
Identities = 12/31 (38%), Positives = 15/31 (48%)
Query: 639 GDYIASGSDDGRWFIWEKQTGRLIKMLLGDE 669
G IA+ S DG I+ T + I L G E
Sbjct: 315 GKLIATASADGTARIFSAATRKCIAKLEGHE 345
>UNIPROTKB|B8YE10 [details] [associations]
symbol:TBL1Y "Transducin (Beta)-like 1Y-linked"
species:9544 "Macaca mulatta" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0003714 "transcription corepressor activity" evidence=ISS]
[GO:0005876 "spindle microtubule" evidence=ISS] [GO:0006508
"proteolysis" evidence=ISS] [GO:0007605 "sensory perception of
sound" evidence=ISS] [GO:0008013 "beta-catenin binding"
evidence=ISS] [GO:0017053 "transcriptional repressor complex"
evidence=ISS] [GO:0042393 "histone binding" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0017053
GO:GO:0003714 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0006508 GO:GO:0000122 GO:GO:0007605
InterPro:IPR013720 Pfam:PF08513 GO:GO:0042393 GO:GO:0008013
GO:GO:0060070 GO:GO:0005876 KO:K04508 HOGENOM:HOG000220902
HOVERGEN:HBG050240 OrthoDB:EOG412M5M CTD:90665 EMBL:FJ527023
RefSeq:NP_001138540.1 UniGene:Mmu.17760 ProteinModelPortal:B8YE10
STRING:B8YE10 GeneID:100270702 KEGG:mcc:100270702 NextBio:19970520
Uniprot:B8YE10
Length = 520
Score = 140 (54.3 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 39/135 (28%), Positives = 68/135 (50%)
Query: 2 ENFPFHDGSIYDMLDTRHTDTRPDVNHSLQMHSSLVRRLSQEREL---EGHQGCVNAISW 58
+ FPFH D+ D ++ T + + +H V RL +R + +GH VNAI W
Sbjct: 308 QQFPFHSAPALDV-DWQNNTTFASCSTDMCIH---VCRLGCDRPVKTFQGHTNEVNAIKW 363
Query: 59 NSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPE---TSDE----LVV 111
+ G LL S SDD + +WS +H+++ H ++ K+ P TS+ ++
Sbjct: 364 DPSGMLLASCSDDMTLKIWSMKQDACVHNLQA-HRKEIYTIKWSPTGPTTSNPNSSIMLA 422
Query: 112 SGAGDAEVRLFNLSR 126
S + D+ VRL+++ +
Sbjct: 423 SASFDSTVRLWDMEQ 437
Score = 59 (25.8 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 13/29 (44%), Positives = 16/29 (55%)
Query: 639 GDYIASGSDDGRWFIWEKQTGRLIKMLLG 667
G Y+ASGS D IW Q+G L+ G
Sbjct: 460 GKYLASGSFDKCVHIWNTQSGSLVHSYQG 488
>UNIPROTKB|F1S4C1 [details] [associations]
symbol:DCAF5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005739 Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0080008
GeneTree:ENSGT00530000062951 EMBL:CU633187
Ensembl:ENSSSCT00000002564 Uniprot:F1S4C1
Length = 132
Score = 129 (50.5 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 37/122 (30%), Positives = 57/122 (46%)
Query: 10 SIYDMLDTRHTDTRPDVNHSLQMHSSLVRRLSQERELEGHQGCVNAISW-NSKGSLLISG 68
S+ L R P + Q R +++L GH GCVNAI + N+ G L+SG
Sbjct: 13 SVVGFLSQRGLHGDPLLTQDFQRRRLRGCRNLYKKDLLGHFGCVNAIEFSNNGGQWLVSG 72
Query: 69 SDDTHINVW----SYSSRKLLHSIETGHSANVFCTKFVPETSDELVVSGAGDAEVRLFNL 124
DD + +W + SR ++ H +N+FC F + + V SG D +V L ++
Sbjct: 73 GDDRRVLLWHMEQAIHSRVKPIQLKGEHHSNIFCLAF--NSGNTKVFSGGNDEQVILHDV 130
Query: 125 SR 126
R
Sbjct: 131 ER 132
>UNIPROTKB|C3UJQ7 [details] [associations]
symbol:TBL1Y "Transducin (Beta)-like 1 Y-linked"
species:9593 "Gorilla gorilla" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0003714 "transcription corepressor activity" evidence=ISS]
[GO:0005876 "spindle microtubule" evidence=ISS] [GO:0006508
"proteolysis" evidence=ISS] [GO:0007605 "sensory perception of
sound" evidence=ISS] [GO:0008013 "beta-catenin binding"
evidence=ISS] [GO:0017053 "transcriptional repressor complex"
evidence=ISS] [GO:0042393 "histone binding" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0017053
GO:GO:0003714 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0006508 GO:GO:0000122 GO:GO:0007605 InterPro:IPR013720
Pfam:PF08513 GO:GO:0042393 GO:GO:0008013 GO:GO:0060070
GO:GO:0005876 HOGENOM:HOG000220902 EMBL:FJ532265
ProteinModelPortal:C3UJQ7 Uniprot:C3UJQ7
Length = 524
Score = 138 (53.6 bits), Expect = 3.5e-07, Sum P(2) = 3.5e-07
Identities = 39/135 (28%), Positives = 66/135 (48%)
Query: 2 ENFPFHDGSIYDMLDTRHTDTRPDVNHSLQMHSSLVRRLSQE---RELEGHQGCVNAISW 58
+ FPFH D+ D ++ T + +H V RL + + +GH VNAI W
Sbjct: 312 QQFPFHSAPALDV-DWQNNTTFASCGTDMCIH---VCRLGCDLPVKTFQGHTNEVNAIKW 367
Query: 59 NSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPE---TSDE----LVV 111
+ G LL S SDD + +WS +H ++ HS ++ K+ P TS+ ++
Sbjct: 368 DPSGMLLASCSDDMTLKIWSMKQDACVHDLQA-HSKEIYTIKWSPTGPATSNPNSSIMLA 426
Query: 112 SGAGDAEVRLFNLSR 126
S + D+ VRL+++ +
Sbjct: 427 SASFDSTVRLWDVEQ 441
Score = 59 (25.8 bits), Expect = 3.5e-07, Sum P(2) = 3.5e-07
Identities = 13/29 (44%), Positives = 16/29 (55%)
Query: 639 GDYIASGSDDGRWFIWEKQTGRLIKMLLG 667
G Y+ASGS D IW Q+G L+ G
Sbjct: 464 GKYLASGSFDKCVHIWNTQSGSLVHSYQG 492
>UNIPROTKB|Q9BQ87 [details] [associations]
symbol:TBL1Y "F-box-like/WD repeat-containing protein
TBL1Y" species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 InterPro:IPR013720
Pfam:PF08513 KO:K04508 HOGENOM:HOG000220902 HOVERGEN:HBG050240
OrthoDB:EOG412M5M EMBL:AF332220 EMBL:AF332221 EMBL:AF332222
EMBL:CH471163 EMBL:BC130471 EMBL:BC130473 IPI:IPI00020873
RefSeq:NP_150600.1 RefSeq:NP_599020.1 RefSeq:NP_599021.1
UniGene:Hs.664560 ProteinModelPortal:Q9BQ87 SMR:Q9BQ87
STRING:Q9BQ87 PhosphoSite:Q9BQ87 DMDM:23396873 PaxDb:Q9BQ87
PRIDE:Q9BQ87 Ensembl:ENST00000346432 Ensembl:ENST00000355162
Ensembl:ENST00000383032 GeneID:90665 KEGG:hsa:90665 UCSC:uc004frb.3
CTD:90665 GeneCards:GC0YP006778 HGNC:HGNC:18502 MIM:400033
neXtProt:NX_Q9BQ87 PharmGKB:PA38564 InParanoid:Q9BQ87 OMA:VHSYQGT
PhylomeDB:Q9BQ87 GenomeRNAi:90665 NextBio:76909 ArrayExpress:Q9BQ87
Bgee:Q9BQ87 CleanEx:HS_TBL1Y Genevestigator:Q9BQ87
GermOnline:ENSG00000092377 Uniprot:Q9BQ87
Length = 522
Score = 137 (53.3 bits), Expect = 3.5e-07, Sum P(2) = 3.5e-07
Identities = 36/132 (27%), Positives = 64/132 (48%)
Query: 2 ENFPFHDGSIYDMLDTRHTDTRPDVNHSLQMHSSLVRRLSQERELEGHQGCVNAISWNSK 61
+ FPFH D+ D ++ T + + +H + + +GH VNAI W+
Sbjct: 312 QQFPFHSAPALDV-DWQNNMTFASCSTDMCIHVCRLGCDHPVKTFQGHTNEVNAIKWDPS 370
Query: 62 GSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPE---TSDE----LVVSGA 114
G LL S SDD + +WS +H ++ HS ++ K+ P TS+ ++ S +
Sbjct: 371 GMLLASCSDDMTLKIWSMKQDACVHDLQA-HSKEIYTIKWSPTGPATSNPNSSIMLASAS 429
Query: 115 GDAEVRLFNLSR 126
D+ VRL+++ +
Sbjct: 430 FDSTVRLWDVEQ 441
Score = 60 (26.2 bits), Expect = 3.5e-07, Sum P(2) = 3.5e-07
Identities = 13/29 (44%), Positives = 16/29 (55%)
Query: 639 GDYIASGSDDGRWFIWEKQTGRLIKMLLG 667
G Y+ASGS D IW Q+G L+ G
Sbjct: 464 GKYLASGSFDKYVHIWNTQSGSLVHSYQG 492
>ASPGD|ASPL0000032070 [details] [associations]
symbol:fbx23 species:162425 "Emericella nidulans"
[GO:0071482 "cellular response to light stimulus" evidence=IMP]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:BN001305 KO:K03362 EMBL:AACD01000096
OrthoDB:EOG4HQHSG RefSeq:XP_663197.1 ProteinModelPortal:Q5B1I7
EnsemblFungi:CADANIAT00003484 GeneID:2871879 KEGG:ani:AN5593.2
HOGENOM:HOG000191354 OMA:TNFQLPH Uniprot:Q5B1I7
Length = 854
Score = 149 (57.5 bits), Expect = 5.8e-07, Sum P(2) = 5.8e-07
Identities = 29/79 (36%), Positives = 47/79 (59%)
Query: 47 EGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPETS 106
E HQ CV AI + G L+SGS D + VW ++++L H GH+ +V C +F P S
Sbjct: 324 EAHQECVYAIQFI--GKWLVSGSRDKTVRVWDLNTKRLWHRPLIGHTKSVLCLQFNPSPS 381
Query: 107 DELVVSGAGDAEVRLFNLS 125
+++++SG+ D V ++ S
Sbjct: 382 EDIIISGSSDKNVIVWRFS 400
Score = 51 (23.0 bits), Expect = 5.8e-07, Sum P(2) = 5.8e-07
Identities = 13/33 (39%), Positives = 15/33 (45%)
Query: 639 GDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAG 671
GD I S S D IW + G K +G E G
Sbjct: 511 GDEIVSASGDRLIKIWNIRNGACKKTFVGHEKG 543
Score = 38 (18.4 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 9/21 (42%), Positives = 11/21 (52%)
Query: 636 GQRGDYIASGSDDGRWFIWEK 656
G + I SGS D IW+K
Sbjct: 660 GSKWARIVSGSYDESIIIWKK 680
>UNIPROTKB|G8JKX8 [details] [associations]
symbol:COPB2 "Coatomer subunit beta'" species:9913 "Bos
taurus" [GO:0030126 "COPI vesicle coat" evidence=IEA] [GO:0015629
"actin cytoskeleton" evidence=IEA] [GO:0006891 "intra-Golgi
vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006886 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0005198 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006891 GO:GO:0030126 GeneTree:ENSGT00640000091529
OMA:LRNKAFG EMBL:DAAA02002931 EMBL:DAAA02002930 EMBL:DAAA02002932
Ensembl:ENSBTAT00000019767 Uniprot:G8JKX8
Length = 713
Score = 151 (58.2 bits), Expect = 7.0e-07, Sum P(3) = 7.0e-07
Identities = 31/84 (36%), Positives = 51/84 (60%)
Query: 46 LEGHQGCVNAISWNSKGS--LLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVP 103
LEGH+ VN I + S G LISG+DD + +W Y ++ + ++E GH+ NV C F P
Sbjct: 152 LEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLE-GHAQNVSCASFHP 210
Query: 104 ETSDELVVSGAGDAEVRLFNLSRF 127
E ++++G+ D VR+++ S +
Sbjct: 211 ELP--IIITGSEDGTVRIWHSSTY 232
Score = 46 (21.3 bits), Expect = 7.0e-07, Sum P(3) = 7.0e-07
Identities = 8/35 (22%), Positives = 19/35 (54%)
Query: 269 PMHLSEHGRSSLHLTHVTFSPNGEEVLLSYSGEHV 303
P+ + + G ++ + +PNG V++ GE++
Sbjct: 313 PLAVKDMGSCEIYPQTIQHNPNGRFVVVCGDGEYI 347
Score = 42 (19.8 bits), Expect = 7.0e-07, Sum P(3) = 7.0e-07
Identities = 7/15 (46%), Positives = 11/15 (73%)
Query: 416 KRKWKNDAQMAIRDC 430
++KWK A++AI C
Sbjct: 638 EQKWKQLAELAISKC 652
Score = 40 (19.1 bits), Expect = 1.1e-06, Sum P(3) = 1.1e-06
Identities = 11/41 (26%), Positives = 22/41 (53%)
Query: 356 VATGLGKCRMLVEIARNSLEEGKHPYYGIEACNEVLEGHLS 396
+AT G M+ ++A + +GK+ + + L+G+LS
Sbjct: 673 LATASGNASMVNKLAEGAERDGKN---NVAFMSYFLQGNLS 710
>UNIPROTKB|Q0P593 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9913 "Bos taurus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:BC120334 IPI:IPI00712806 RefSeq:NP_001069398.1
UniGene:Bt.25265 ProteinModelPortal:Q0P593 PRIDE:Q0P593
GeneID:530118 KEGG:bta:530118 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 InParanoid:Q0P593 OrthoDB:EOG44BB28
NextBio:20875184 Uniprot:Q0P593
Length = 415
Score = 124 (48.7 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 27/80 (33%), Positives = 47/80 (58%)
Query: 46 LEGHQGCVNAISWNSK-GSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPE 104
LEGH+ V AI++N+ G + +GS D +WS + K H+ GH+A + C F P+
Sbjct: 130 LEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGKCYHTFR-GHTAEIVCLSFNPQ 188
Query: 105 TSDELVVSGAGDAEVRLFNL 124
++ LV +G+ D +L+++
Sbjct: 189 ST--LVATGSMDTTAKLWDI 206
Score = 118 (46.6 bits), Expect = 0.00087, P = 0.00087
Identities = 23/78 (29%), Positives = 46/78 (58%)
Query: 45 ELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPE 104
+LEGH+G ++ IS+N +G+ L++GS D +W + + L +E GH+ +F F
Sbjct: 340 KLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDAQTGQCLQVLE-GHTDEIFSCAF--N 396
Query: 105 TSDELVVSGAGDAEVRLF 122
+++++G+ D R++
Sbjct: 397 YKGDIIITGSKDNTCRIW 414
Score = 66 (28.3 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 21/66 (31%), Positives = 32/66 (48%)
Query: 621 GHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGD--EAGNVISSME 678
GH +I SF G+ I +GS D +WE TGR + L+G E + + + +
Sbjct: 217 GH---SAEIISLSF-NTSGNRIITGSFDHTVTVWEADTGRKVYTLIGHCAEISSAVFNWD 272
Query: 679 ECGLLL 684
C L+L
Sbjct: 273 -CSLIL 277
Score = 64 (27.6 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 15/40 (37%), Positives = 25/40 (62%)
Query: 628 DIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLG 667
+I + SF Q G+ + +GS D IW+ QTG+ +++L G
Sbjct: 347 EISKISFNPQ-GNRLLTGSSDKTARIWDAQTGQCLQVLEG 385
Score = 52 (23.4 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 17/65 (26%), Positives = 28/65 (43%)
Query: 620 VGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAGNVISSMEE 679
+GHC +I A F I +GS D +W+ G+ + L G + + S +
Sbjct: 258 IGHC---AEISSAVF-NWDCSLILTGSMDKTCKLWDAVNGKCVATLTGHDDEILDSCFDY 313
Query: 680 CGLLL 684
G L+
Sbjct: 314 TGKLI 318
Score = 42 (19.8 bits), Expect = 0.00021, Sum P(3) = 0.00021
Identities = 12/34 (35%), Positives = 17/34 (50%)
Query: 621 GHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIW 654
GH + +I +F +GD I +GS D IW
Sbjct: 385 GHTD---EIFSCAF-NYKGDIIITGSKDNTCRIW 414
Score = 42 (19.8 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 10/47 (21%), Positives = 22/47 (46%)
Query: 282 LTHVTFSPNGEEVLLSYSGEHVYLMDVNHAGGRAMRYTVGDASKIMS 328
++ ++F+P G +L S + + D G+ ++ G +I S
Sbjct: 348 ISKISFNPQGNRLLTGSSDKTARIWDAQT--GQCLQVLEGHTDEIFS 392
Score = 40 (19.1 bits), Expect = 0.00021, Sum P(3) = 0.00021
Identities = 8/14 (57%), Positives = 10/14 (71%)
Query: 231 LLVGGSDAFARLYD 244
LL G SD AR++D
Sbjct: 360 LLTGSSDKTARIWD 373
Score = 37 (18.1 bits), Expect = 0.00097, Sum P(2) = 0.00097
Identities = 11/31 (35%), Positives = 14/31 (45%)
Query: 639 GDYIASGSDDGRWFIWEKQTGRLIKMLLGDE 669
G IA+ S DG I+ T + L G E
Sbjct: 315 GKLIATASADGTARIFSAATRECVTKLEGHE 345
>RGD|1561436 [details] [associations]
symbol:LOC363267 "hypothetical protein LOC363267" species:10116
"Rattus norvegicus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1561436 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 HOGENOM:HOG000253909 HOVERGEN:HBG103651 OMA:RKCISKL
EMBL:BC091226 IPI:IPI00367113 RefSeq:NP_001020196.1
UniGene:Rn.104466 ProteinModelPortal:Q5BK30 PRIDE:Q5BK30
Ensembl:ENSRNOT00000021813 GeneID:363267 KEGG:rno:363267
UCSC:RGD:1561436 InParanoid:Q5BK30 NextBio:683054
Genevestigator:Q5BK30 Uniprot:Q5BK30
Length = 415
Score = 120 (47.3 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 26/80 (32%), Positives = 47/80 (58%)
Query: 46 LEGHQGCVNAISWNSK-GSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPE 104
LEGH+ V AI++N+ G + +GS D +WS + K H+ GH+A + C F P+
Sbjct: 130 LEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSAETGKCYHTFR-GHTAEIVCLSFNPQ 188
Query: 105 TSDELVVSGAGDAEVRLFNL 124
++ +V +G+ D +L+++
Sbjct: 189 ST--VVATGSMDTTAKLWDI 206
Score = 120 (47.3 bits), Expect = 0.00053, P = 0.00053
Identities = 31/118 (26%), Positives = 60/118 (50%)
Query: 7 HDGSIYDM-LD-TRHTDTRPDVNHSLQMHSSLVRRLSQERELEGHQGCVNAISWNSKGSL 64
HD I D D T + + +++++ R+ + LEGH+G ++ IS+N +G+
Sbjct: 302 HDDEILDSCFDYTGKLIATASADGTARVYNATTRKCITK--LEGHEGEISKISFNPQGNR 359
Query: 65 LISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPETSDELVVSGAGDAEVRLF 122
L++GS D +W + + L +E GH+ +F F +V++G+ D R++
Sbjct: 360 LLTGSSDKTARIWDVQTGQCLQVLE-GHTDEIFSCAF--NYKGNIVITGSKDNSCRIW 414
Score = 70 (29.7 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 17/48 (35%), Positives = 26/48 (54%)
Query: 639 GDYIASGSDDGRWFIWEKQTGRLIKMLLGD--EAGNVISSMEECGLLL 684
GD I +GS D +W+ TGR + L+G E + + S + C L+L
Sbjct: 231 GDRIITGSFDHTVVVWDASTGRKVHTLIGHCAEISSALFSWD-CSLIL 277
Score = 63 (27.2 bits), Expect = 6.0e-06, Sum P(2) = 6.0e-06
Identities = 15/40 (37%), Positives = 25/40 (62%)
Query: 628 DIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLG 667
+I + SF Q G+ + +GS D IW+ QTG+ +++L G
Sbjct: 347 EISKISFNPQ-GNRLLTGSSDKTARIWDVQTGQCLQVLEG 385
Score = 57 (25.1 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 17/65 (26%), Positives = 29/65 (44%)
Query: 620 VGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAGNVISSMEE 679
+GHC +I A F I +GS D +W+ +G+ + L G + + S +
Sbjct: 258 IGHC---AEISSALFSWDCS-LILTGSMDKTCMLWDATSGKCVATLTGHDDEILDSCFDY 313
Query: 680 CGLLL 684
G L+
Sbjct: 314 TGKLI 318
Score = 46 (21.3 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 11/47 (23%), Positives = 23/47 (48%)
Query: 282 LTHVTFSPNGEEVLLSYSGEHVYLMDVNHAGGRAMRYTVGDASKIMS 328
++ ++F+P G +L S + + DV G+ ++ G +I S
Sbjct: 348 ISKISFNPQGNRLLTGSSDKTARIWDVQT--GQCLQVLEGHTDEIFS 392
>UNIPROTKB|B4DZI8 [details] [associations]
symbol:COPB2 "Coatomer protein complex, subunit beta 2
(Beta prime), isoform CRA_b" species:9606 "Homo sapiens"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0015629 "actin
cytoskeleton" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005794
GO:GO:0006886 GO:GO:0030117 GO:GO:0016192 Gene3D:2.130.10.10
SUPFAM:SSF50978 GO:GO:0005198 GO:GO:0015629 EMBL:CH471052
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000163444
HOVERGEN:HBG051076 InterPro:IPR016453 PIRSF:PIRSF005567
UniGene:Hs.681616 HGNC:HGNC:2232 ChiTaRS:COPB2 EMBL:AC024933
EMBL:AK302943 IPI:IPI00789674 SMR:B4DZI8 STRING:B4DZI8
Ensembl:ENST00000507777 Uniprot:B4DZI8
Length = 877
Score = 151 (58.2 bits), Expect = 1.5e-06, Sum P(3) = 1.5e-06
Identities = 31/84 (36%), Positives = 51/84 (60%)
Query: 46 LEGHQGCVNAISWNSKGS--LLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVP 103
LEGH+ VN I + S G LISG+DD + +W Y ++ + ++E GH+ NV C F P
Sbjct: 152 LEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLE-GHAQNVSCASFHP 210
Query: 104 ETSDELVVSGAGDAEVRLFNLSRF 127
E ++++G+ D VR+++ S +
Sbjct: 211 ELP--IIITGSEDGTVRIWHSSTY 232
Score = 46 (21.3 bits), Expect = 1.5e-06, Sum P(3) = 1.5e-06
Identities = 8/35 (22%), Positives = 19/35 (54%)
Query: 269 PMHLSEHGRSSLHLTHVTFSPNGEEVLLSYSGEHV 303
P+ + + G ++ + +PNG V++ GE++
Sbjct: 313 PLAVKDMGSCEIYPQTIQHNPNGRFVVVCGDGEYI 347
Score = 42 (19.8 bits), Expect = 1.5e-06, Sum P(3) = 1.5e-06
Identities = 7/15 (46%), Positives = 11/15 (73%)
Query: 416 KRKWKNDAQMAIRDC 430
++KWK A++AI C
Sbjct: 638 EQKWKQLAELAISKC 652
Score = 39 (18.8 bits), Expect = 3.1e-06, Sum P(3) = 3.1e-06
Identities = 13/44 (29%), Positives = 24/44 (54%)
Query: 356 VATGLGKCRMLVEIARNSLEEGKH-----PYY--G-IEACNEVL 391
+AT G M+ ++A + +GK+ Y+ G ++AC E+L
Sbjct: 673 LATASGNANMVNKLAEGAERDGKNNVAFMSYFLQGKVDACLELL 716
>UNIPROTKB|E1BYR9 [details] [associations]
symbol:ATG16L1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000421 "autophagic vacuole membrane"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GeneTree:ENSGT00700000104505 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0000421 InterPro:IPR013923 Pfam:PF08614
OMA:LETECQE EMBL:AADN02024429 EMBL:AADN02024430 IPI:IPI00589713
Ensembl:ENSGALT00000002475 Uniprot:E1BYR9
Length = 608
Score = 120 (47.3 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 26/86 (30%), Positives = 48/86 (55%)
Query: 39 RLSQERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFC 98
R + L G + +I ++S GS L++ S+D +W+ +L H++ TGHS V
Sbjct: 355 RCEPKGSLSGSNAGITSIEFDSAGSYLLAASNDFASRIWTVDDNRLRHTL-TGHSGKVLS 413
Query: 99 TKFVPETSDELVVSGAGDAEVRLFNL 124
KF+ + + +VSG+ D ++L++L
Sbjct: 414 AKFLLDNAR--IVSGSHDRTLKLWDL 437
Score = 73 (30.8 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 15/40 (37%), Positives = 24/40 (60%)
Query: 626 GTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKML 665
G+D + F G+Y+A+GS DG ++W TG+L + L
Sbjct: 535 GSDWTRVVF-SPDGNYVAAGSADGALYVWNVLTGKLERTL 573
>MGI|MGI:1354962 [details] [associations]
symbol:Copb2 "coatomer protein complex, subunit beta 2 (beta
prime)" species:10090 "Mus musculus" [GO:0000139 "Golgi membrane"
evidence=ISO] [GO:0005080 "protein kinase C binding" evidence=ISO]
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=ISA;IDA] [GO:0006810 "transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0006891
"intra-Golgi vesicle-mediated transport" evidence=ISO] [GO:0015031
"protein transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA] [GO:0030126
"COPI vesicle coat" evidence=ISO] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 MGI:MGI:1354962
GO:GO:0005794 GO:GO:0006886 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 GO:GO:0005198 GO:GO:0015629 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006891 GO:GO:0030126
CTD:9276 HOGENOM:HOG000163444 HOVERGEN:HBG051076 OrthoDB:EOG43R3KZ
InterPro:IPR016453 PIRSF:PIRSF005567 GeneTree:ENSGT00640000091529
OMA:LRNKAFG EMBL:AK088064 EMBL:AK153352 EMBL:AF043120 EMBL:BC006675
IPI:IPI00115097 RefSeq:NP_056642.1 UniGene:Mm.400464
ProteinModelPortal:O55029 SMR:O55029 IntAct:O55029 STRING:O55029
PhosphoSite:O55029 PaxDb:O55029 PRIDE:O55029
Ensembl:ENSMUST00000035033 GeneID:50797 KEGG:mmu:50797
UCSC:uc009rdm.1 InParanoid:O55029 NextBio:307805 Bgee:O55029
Genevestigator:O55029 GermOnline:ENSMUSG00000032458 Uniprot:O55029
Length = 905
Score = 151 (58.2 bits), Expect = 1.7e-06, Sum P(3) = 1.7e-06
Identities = 31/84 (36%), Positives = 51/84 (60%)
Query: 46 LEGHQGCVNAISWNSKGS--LLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVP 103
LEGH+ VN I + S G LISG+DD + +W Y ++ + ++E GH+ NV C F P
Sbjct: 181 LEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLE-GHAQNVSCASFHP 239
Query: 104 ETSDELVVSGAGDAEVRLFNLSRF 127
E ++++G+ D VR+++ S +
Sbjct: 240 ELP--IIITGSEDGTVRIWHSSTY 261
Score = 46 (21.3 bits), Expect = 1.7e-06, Sum P(3) = 1.7e-06
Identities = 8/35 (22%), Positives = 19/35 (54%)
Query: 269 PMHLSEHGRSSLHLTHVTFSPNGEEVLLSYSGEHV 303
P+ + + G ++ + +PNG V++ GE++
Sbjct: 342 PLAVKDMGSCEIYPQTIQHNPNGRFVVVCGDGEYI 376
Score = 42 (19.8 bits), Expect = 1.7e-06, Sum P(3) = 1.7e-06
Identities = 7/15 (46%), Positives = 11/15 (73%)
Query: 416 KRKWKNDAQMAIRDC 430
++KWK A++AI C
Sbjct: 667 EQKWKQLAELAISKC 681
Score = 37 (18.1 bits), Expect = 5.5e-06, Sum P(3) = 5.5e-06
Identities = 13/44 (29%), Positives = 24/44 (54%)
Query: 356 VATGLGKCRMLVEIARNSLEEGKH-----PYY--G-IEACNEVL 391
+AT G M+ ++A + +GK+ Y+ G ++AC E+L
Sbjct: 702 LATASGNASMVNKLAEGAERDGKNNVAFMSYFLQGKLDACLELL 745
>UNIPROTKB|P35606 [details] [associations]
symbol:COPB2 "Coatomer subunit beta'" species:9606 "Homo
sapiens" [GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0006890 "retrograde vesicle-mediated transport, Golgi to ER"
evidence=TAS] [GO:0030126 "COPI vesicle coat" evidence=IDA]
[GO:0006891 "intra-Golgi vesicle-mediated transport" evidence=IDA]
[GO:0005829 "cytosol" evidence=TAS] [GO:0016044 "cellular membrane
organization" evidence=TAS] [GO:0048205 "COPI coating of Golgi
vesicle" evidence=TAS] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0015629 "actin
cytoskeleton" evidence=IDA] Reactome:REACT_11123 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005829 GO:GO:0006886 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005198 GO:GO:0015629
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006891
GO:GO:0030126 GO:GO:0048205 GO:GO:0006890 CTD:9276
HOGENOM:HOG000163444 HOVERGEN:HBG051076 OrthoDB:EOG43R3KZ
InterPro:IPR016453 PIRSF:PIRSF005567 OMA:LRNKAFG EMBL:X70476
EMBL:BC000326 IPI:IPI00220219 PIR:S35342 RefSeq:NP_004757.1
UniGene:Hs.681616 ProteinModelPortal:P35606 SMR:P35606
DIP:DIP-27603N IntAct:P35606 MINT:MINT-5000992 STRING:P35606
PhosphoSite:P35606 DMDM:544076 PaxDb:P35606 PeptideAtlas:P35606
PRIDE:P35606 DNASU:9276 Ensembl:ENST00000333188 GeneID:9276
KEGG:hsa:9276 UCSC:uc003etf.4 GeneCards:GC03M139076 HGNC:HGNC:2232
HPA:HPA036867 MIM:606990 neXtProt:NX_P35606 PharmGKB:PA26748
InParanoid:P35606 PhylomeDB:P35606 ChiTaRS:COPB2 GenomeRNAi:9276
NextBio:34765 ArrayExpress:P35606 Bgee:P35606 CleanEx:HS_COPB2
Genevestigator:P35606 GermOnline:ENSG00000184432 Uniprot:P35606
Length = 906
Score = 151 (58.2 bits), Expect = 1.7e-06, Sum P(3) = 1.7e-06
Identities = 31/84 (36%), Positives = 51/84 (60%)
Query: 46 LEGHQGCVNAISWNSKGS--LLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVP 103
LEGH+ VN I + S G LISG+DD + +W Y ++ + ++E GH+ NV C F P
Sbjct: 181 LEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLE-GHAQNVSCASFHP 239
Query: 104 ETSDELVVSGAGDAEVRLFNLSRF 127
E ++++G+ D VR+++ S +
Sbjct: 240 ELP--IIITGSEDGTVRIWHSSTY 261
Score = 46 (21.3 bits), Expect = 1.7e-06, Sum P(3) = 1.7e-06
Identities = 8/35 (22%), Positives = 19/35 (54%)
Query: 269 PMHLSEHGRSSLHLTHVTFSPNGEEVLLSYSGEHV 303
P+ + + G ++ + +PNG V++ GE++
Sbjct: 342 PLAVKDMGSCEIYPQTIQHNPNGRFVVVCGDGEYI 376
Score = 42 (19.8 bits), Expect = 1.7e-06, Sum P(3) = 1.7e-06
Identities = 7/15 (46%), Positives = 11/15 (73%)
Query: 416 KRKWKNDAQMAIRDC 430
++KWK A++AI C
Sbjct: 667 EQKWKQLAELAISKC 681
Score = 39 (18.8 bits), Expect = 3.5e-06, Sum P(3) = 3.5e-06
Identities = 13/44 (29%), Positives = 24/44 (54%)
Query: 356 VATGLGKCRMLVEIARNSLEEGKH-----PYY--G-IEACNEVL 391
+AT G M+ ++A + +GK+ Y+ G ++AC E+L
Sbjct: 702 LATASGNANMVNKLAEGAERDGKNNVAFMSYFLQGKVDACLELL 745
>UNIPROTKB|P35605 [details] [associations]
symbol:COPB2 "Coatomer subunit beta'" species:9913 "Bos
taurus" [GO:0005515 "protein binding" evidence=IPI] [GO:0006891
"intra-Golgi vesicle-mediated transport" evidence=ISS;TAS]
[GO:0005794 "Golgi apparatus" evidence=ISS] [GO:0000139 "Golgi
membrane" evidence=ISS] [GO:0030126 "COPI vesicle coat"
evidence=ISS;IDA] [GO:0005080 "protein kinase C binding"
evidence=ISS] [GO:0006890 "retrograde vesicle-mediated transport,
Golgi to ER" evidence=TAS] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
GO:GO:0005080 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005198 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006891 GO:GO:0030126 GO:GO:0006890 EMBL:X72756 EMBL:BC134537
IPI:IPI00706476 PIR:S35312 RefSeq:NP_776706.2 UniGene:Bt.4801
ProteinModelPortal:P35605 IntAct:P35605 STRING:P35605 PRIDE:P35605
GeneID:281706 KEGG:bta:281706 CTD:9276 HOGENOM:HOG000163444
HOVERGEN:HBG051076 InParanoid:P35605 OrthoDB:EOG43R3KZ
NextBio:20805628 InterPro:IPR016453 PIRSF:PIRSF005567
Uniprot:P35605
Length = 906
Score = 151 (58.2 bits), Expect = 1.7e-06, Sum P(3) = 1.7e-06
Identities = 31/84 (36%), Positives = 51/84 (60%)
Query: 46 LEGHQGCVNAISWNSKGS--LLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVP 103
LEGH+ VN I + S G LISG+DD + +W Y ++ + ++E GH+ NV C F P
Sbjct: 181 LEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLE-GHAQNVSCASFHP 239
Query: 104 ETSDELVVSGAGDAEVRLFNLSRF 127
E ++++G+ D VR+++ S +
Sbjct: 240 ELP--IIITGSEDGTVRIWHSSTY 261
Score = 46 (21.3 bits), Expect = 1.7e-06, Sum P(3) = 1.7e-06
Identities = 8/35 (22%), Positives = 19/35 (54%)
Query: 269 PMHLSEHGRSSLHLTHVTFSPNGEEVLLSYSGEHV 303
P+ + + G ++ + +PNG V++ GE++
Sbjct: 342 PLAVKDMGSCEIYPQTIQHNPNGRFVVVCGDGEYI 376
Score = 42 (19.8 bits), Expect = 1.7e-06, Sum P(3) = 1.7e-06
Identities = 7/15 (46%), Positives = 11/15 (73%)
Query: 416 KRKWKNDAQMAIRDC 430
++KWK A++AI C
Sbjct: 667 EQKWKQLAELAISKC 681
Score = 37 (18.1 bits), Expect = 5.5e-06, Sum P(3) = 5.5e-06
Identities = 13/44 (29%), Positives = 24/44 (54%)
Query: 356 VATGLGKCRMLVEIARNSLEEGKH-----PYY--G-IEACNEVL 391
+AT G M+ ++A + +GK+ Y+ G ++AC E+L
Sbjct: 702 LATASGNASMVNKLAEGAERDGKNNVAFMSYFLQGKLDACLELL 745
>UNIPROTKB|E2R667 [details] [associations]
symbol:COPB2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030126 "COPI vesicle coat" evidence=IEA]
[GO:0015629 "actin cytoskeleton" evidence=IEA] [GO:0006891
"intra-Golgi vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006886 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0005198 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006891 GO:GO:0030126 InterPro:IPR016453 PIRSF:PIRSF005567
GeneTree:ENSGT00640000091529 OMA:LRNKAFG EMBL:AAEX03013631
ProteinModelPortal:E2R667 Ensembl:ENSCAFT00000012160 Uniprot:E2R667
Length = 906
Score = 151 (58.2 bits), Expect = 1.7e-06, Sum P(3) = 1.7e-06
Identities = 31/84 (36%), Positives = 51/84 (60%)
Query: 46 LEGHQGCVNAISWNSKGS--LLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVP 103
LEGH+ VN I + S G LISG+DD + +W Y ++ + ++E GH+ NV C F P
Sbjct: 181 LEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLE-GHAQNVSCASFHP 239
Query: 104 ETSDELVVSGAGDAEVRLFNLSRF 127
E ++++G+ D VR+++ S +
Sbjct: 240 ELP--IIITGSEDGTVRIWHSSTY 261
Score = 46 (21.3 bits), Expect = 1.7e-06, Sum P(3) = 1.7e-06
Identities = 8/35 (22%), Positives = 19/35 (54%)
Query: 269 PMHLSEHGRSSLHLTHVTFSPNGEEVLLSYSGEHV 303
P+ + + G ++ + +PNG V++ GE++
Sbjct: 342 PLAVKDMGSCEIYPQTIQHNPNGRFVVVCGDGEYI 376
Score = 42 (19.8 bits), Expect = 1.7e-06, Sum P(3) = 1.7e-06
Identities = 7/15 (46%), Positives = 11/15 (73%)
Query: 416 KRKWKNDAQMAIRDC 430
++KWK A++AI C
Sbjct: 667 EQKWKQLAELAISKC 681
Score = 37 (18.1 bits), Expect = 5.5e-06, Sum P(3) = 5.5e-06
Identities = 13/44 (29%), Positives = 24/44 (54%)
Query: 356 VATGLGKCRMLVEIARNSLEEGKH-----PYY--G-IEACNEVL 391
+AT G M+ ++A + +GK+ Y+ G ++AC E+L
Sbjct: 702 LATASGNASMVNKLAEGAERDGKNNVAFMSYFLQGKLDACLELL 745
>UNIPROTKB|F1SL54 [details] [associations]
symbol:COPB2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030126 "COPI vesicle coat" evidence=IEA] [GO:0015629
"actin cytoskeleton" evidence=IEA] [GO:0006891 "intra-Golgi
vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006886 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0005198 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006891 GO:GO:0030126 CTD:9276 InterPro:IPR016453
PIRSF:PIRSF005567 GeneTree:ENSGT00640000091529 OMA:LRNKAFG
EMBL:CU582855 RefSeq:XP_001926139.3 UniGene:Ssc.51974
Ensembl:ENSSSCT00000012767 GeneID:100156939 KEGG:ssc:100156939
Uniprot:F1SL54
Length = 906
Score = 151 (58.2 bits), Expect = 1.7e-06, Sum P(3) = 1.7e-06
Identities = 31/84 (36%), Positives = 51/84 (60%)
Query: 46 LEGHQGCVNAISWNSKGS--LLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVP 103
LEGH+ VN I + S G LISG+DD + +W Y ++ + ++E GH+ NV C F P
Sbjct: 181 LEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLE-GHAQNVSCASFHP 239
Query: 104 ETSDELVVSGAGDAEVRLFNLSRF 127
E ++++G+ D VR+++ S +
Sbjct: 240 ELP--IIITGSEDGTVRIWHSSTY 261
Score = 46 (21.3 bits), Expect = 1.7e-06, Sum P(3) = 1.7e-06
Identities = 8/35 (22%), Positives = 19/35 (54%)
Query: 269 PMHLSEHGRSSLHLTHVTFSPNGEEVLLSYSGEHV 303
P+ + + G ++ + +PNG V++ GE++
Sbjct: 342 PLAVKDMGSCEIYPQTIQHNPNGRFVVVCGDGEYI 376
Score = 42 (19.8 bits), Expect = 1.7e-06, Sum P(3) = 1.7e-06
Identities = 7/15 (46%), Positives = 11/15 (73%)
Query: 416 KRKWKNDAQMAIRDC 430
++KWK A++AI C
Sbjct: 667 EQKWKQLAELAISKC 681
Score = 37 (18.1 bits), Expect = 5.5e-06, Sum P(3) = 5.5e-06
Identities = 13/44 (29%), Positives = 24/44 (54%)
Query: 356 VATGLGKCRMLVEIARNSLEEGKH-----PYY--G-IEACNEVL 391
+AT G M+ ++A + +GK+ Y+ G ++AC E+L
Sbjct: 702 LATASGNASMVNKLAEGAERDGKNNVAFMSYFLQGKLDACLELL 745
>UNIPROTKB|E1C016 [details] [associations]
symbol:COPB2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0006891 "intra-Golgi vesicle-mediated transport" evidence=IEA]
[GO:0015629 "actin cytoskeleton" evidence=IEA] [GO:0030126 "COPI
vesicle coat" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0005198 GO:GO:0015629
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006891 GO:GO:0030126
CTD:9276 InterPro:IPR016453 PIRSF:PIRSF005567
GeneTree:ENSGT00640000091529 OMA:LRNKAFG EMBL:AADN02024196
IPI:IPI00598430 RefSeq:XP_422637.2 ProteinModelPortal:E1C016
Ensembl:ENSGALT00000008592 GeneID:424823 KEGG:gga:424823
NextBio:20827098 Uniprot:E1C016
Length = 913
Score = 151 (58.2 bits), Expect = 1.8e-06, Sum P(3) = 1.8e-06
Identities = 31/84 (36%), Positives = 51/84 (60%)
Query: 46 LEGHQGCVNAISWNSKGS--LLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVP 103
LEGH+ VN I + S G LISG+DD + +W Y ++ + ++E GH+ NV C F P
Sbjct: 181 LEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLE-GHAQNVSCVSFHP 239
Query: 104 ETSDELVVSGAGDAEVRLFNLSRF 127
E ++++G+ D VR+++ S +
Sbjct: 240 ELP--IIITGSEDGTVRIWHSSTY 261
Score = 46 (21.3 bits), Expect = 1.8e-06, Sum P(3) = 1.8e-06
Identities = 8/35 (22%), Positives = 19/35 (54%)
Query: 269 PMHLSEHGRSSLHLTHVTFSPNGEEVLLSYSGEHV 303
P+ + + G ++ + +PNG V++ GE++
Sbjct: 342 PLAVKDMGSCEIYPQTIQHNPNGRFVVVCGDGEYI 376
Score = 42 (19.8 bits), Expect = 1.8e-06, Sum P(3) = 1.8e-06
Identities = 7/15 (46%), Positives = 11/15 (73%)
Query: 416 KRKWKNDAQMAIRDC 430
++KWK A++AI C
Sbjct: 667 EQKWKQLAELAISKC 681
Score = 37 (18.1 bits), Expect = 5.6e-06, Sum P(3) = 5.6e-06
Identities = 7/24 (29%), Positives = 15/24 (62%)
Query: 356 VATGLGKCRMLVEIARNSLEEGKH 379
+AT G M+ ++A + ++GK+
Sbjct: 702 LATASGNANMVNKLAEGAEKDGKN 725
>ZFIN|ZDB-GENE-050417-401 [details] [associations]
symbol:atg16l1 "ATG16 autophagy related 16-like 1
(S. cerevisiae)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-050417-401 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GeneTree:ENSGT00700000104505
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013923 Pfam:PF08614
EMBL:CABZ01067234 EMBL:CABZ01067235 EMBL:CABZ01067236
EMBL:CABZ01067237 EMBL:CABZ01067238 EMBL:CU672237 IPI:IPI00995960
ProteinModelPortal:F1QGM8 Ensembl:ENSDART00000122085 Bgee:F1QGM8
Uniprot:F1QGM8
Length = 605
Score = 118 (46.6 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 34/133 (25%), Positives = 66/133 (49%)
Query: 39 RLSQERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFC 98
R + L G + +I ++S GS L++ S+D +W+ +L H++ TGHS V
Sbjct: 350 RCEPKGALTGSNAGITSIEFDSAGSYLLAASNDFASRIWTVDDYRLRHTL-TGHSGKVLS 408
Query: 99 TKFVPETSDELVVSGAGDAEVRLFNL-SR-------FSGRGLDDNAITPSALYQCH-TRR 149
+F+ + + +VSG+ D ++L++L S+ F+G +D T + H ++
Sbjct: 409 ARFLLDNAR--IVSGSYDRTLKLWDLRSKVCSMKTVFAGSSCNDIVCTEQCVMSGHFDKK 466
Query: 150 VKKLAVEVGNPHV 162
V+ + N H+
Sbjct: 467 VRFWDISYQNYHI 479
Score = 74 (31.1 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 15/40 (37%), Positives = 24/40 (60%)
Query: 626 GTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKML 665
G+D + +F G ++A+GS DG ++W TG+L K L
Sbjct: 532 GSDFTRVTF-SPDGSFVAAGSADGVLYLWNVLTGKLEKTL 570
Score = 52 (23.4 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 18/53 (33%), Positives = 26/53 (49%)
Query: 283 THVTFSPNGEEVLLSYSGEHVYLMDVNHAGGRAMRYTVGDASKIMSFTPTLNG 335
T VTFSP+G V + +YL +V G G +S I S + +L+G
Sbjct: 536 TRVTFSPDGSFVAAGSADGVLYLWNVL-TGKLEKTLDKGHSSAINSVSWSLSG 587
>TAIR|locus:2158232 [details] [associations]
symbol:HOS15 "high expression of osmotically responsive
genes 15" species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=ISS] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0009409 "response to cold" evidence=IMP]
[GO:0016575 "histone deacetylation" evidence=IMP] [GO:0000956
"nuclear-transcribed mRNA catabolic process" evidence=RCA]
[GO:0006342 "chromatin silencing" evidence=RCA] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0010388 "cullin
deneddylation" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0016571 "histone methylation" evidence=RCA]
[GO:0016572 "histone phosphorylation" evidence=RCA] [GO:0016579
"protein deubiquitination" evidence=RCA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0051567 "histone H3-K9 methylation" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005634
EMBL:CP002688 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0009409 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR013720 Pfam:PF08513 EMBL:AB007645 GO:GO:0016575
HSSP:P16649 GO:GO:0080008 HOGENOM:HOG000220902 OMA:LANNHAD
EMBL:AY057698 EMBL:AY143932 IPI:IPI00531489 RefSeq:NP_201533.1
UniGene:At.6493 ProteinModelPortal:Q9FN19 SMR:Q9FN19 STRING:Q9FN19
PRIDE:Q9FN19 EnsemblPlants:AT5G67320.1 GeneID:836867
KEGG:ath:AT5G67320 TAIR:At5g67320 InParanoid:Q9FN19
PhylomeDB:Q9FN19 ProtClustDB:CLSN2687044 Genevestigator:Q9FN19
Uniprot:Q9FN19
Length = 613
Score = 125 (49.1 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 32/129 (24%), Positives = 62/129 (48%)
Query: 2 ENFPFHDGSIYDMLDTRHTDTRPDVNHSLQMHSSLVRRLSQERELEGHQGCVNAISWNSK 61
+ F FH G D+ D R+ + + ++ + + GHQG VN + W+
Sbjct: 401 QQFEFHSGPTLDV-DWRNNVSFATSSTDSMIYLCKIGETRPAKTFTGHQGEVNCVKWDPT 459
Query: 62 GSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPE---TSD---ELVVSGAG 115
GSLL S SDD+ +W+ +H + H+ ++ ++ P T++ +L ++ A
Sbjct: 460 GSLLASCSDDSTAKIWNIKQSTFVHDLRE-HTKEIYTIRWSPTGPGTNNPNKQLTLASAS 518
Query: 116 -DAEVRLFN 123
D+ V+L++
Sbjct: 519 FDSTVKLWD 527
Score = 66 (28.3 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 13/30 (43%), Positives = 19/30 (63%)
Query: 639 GDYIASGSDDGRWFIWEKQTGRLIKMLLGD 668
G+YIASGS D IW + G+++K G+
Sbjct: 553 GEYIASGSLDKSIHIWSIKEGKIVKTYTGN 582
>ZFIN|ZDB-GENE-010724-7 [details] [associations]
symbol:copb2 "coatomer protein complex, subunit beta
2" species:7955 "Danio rerio" [GO:0005198 "structural molecule
activity" evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA] [GO:0030903
"notochord development" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-010724-7 GO:GO:0006886 GO:GO:0030117
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0005198
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030903 CTD:9276
HOVERGEN:HBG051076 InterPro:IPR016453 PIRSF:PIRSF005567
EMBL:AY294011 IPI:IPI00487448 RefSeq:NP_001001940.1
UniGene:Dr.14625 ProteinModelPortal:Q6JWU7 STRING:Q6JWU7
PRIDE:Q6JWU7 GeneID:114454 KEGG:dre:114454 InParanoid:Q6JWU7
NextBio:20796938 ArrayExpress:Q6JWU7 Bgee:Q6JWU7 Uniprot:Q6JWU7
Length = 934
Score = 149 (57.5 bits), Expect = 3.2e-06, Sum P(3) = 3.2e-06
Identities = 31/84 (36%), Positives = 50/84 (59%)
Query: 46 LEGHQGCVNAISWNSKGS--LLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVP 103
LEGH VN I + S G LISG+DD + +W Y ++ + ++E GH+ NV C F P
Sbjct: 181 LEGHDKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLE-GHAQNVSCVNFHP 239
Query: 104 ETSDELVVSGAGDAEVRLFNLSRF 127
E ++++G+ D VR+++ S +
Sbjct: 240 ELP--IIITGSEDGTVRIWHSSTY 261
Score = 46 (21.3 bits), Expect = 3.2e-06, Sum P(3) = 3.2e-06
Identities = 8/35 (22%), Positives = 19/35 (54%)
Query: 269 PMHLSEHGRSSLHLTHVTFSPNGEEVLLSYSGEHV 303
P+ + + G ++ + +PNG V++ GE++
Sbjct: 342 PLAVKDMGSCEIYPQTIQHNPNGRFVVVCGDGEYI 376
Score = 42 (19.8 bits), Expect = 3.2e-06, Sum P(3) = 3.2e-06
Identities = 7/15 (46%), Positives = 11/15 (73%)
Query: 416 KRKWKNDAQMAIRDC 430
++KWK A++AI C
Sbjct: 667 EQKWKQLAELAISKC 681
Score = 38 (18.4 bits), Expect = 7.9e-06, Sum P(3) = 7.9e-06
Identities = 7/24 (29%), Positives = 14/24 (58%)
Query: 356 VATGLGKCRMLVEIARNSLEEGKH 379
+AT G M+ ++A + +GK+
Sbjct: 702 LATASGNASMVAKLAEGAERDGKN 725
>UNIPROTKB|F1NUJ8 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005814 "centriole" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:AADN02052960
EMBL:AADN02052961 EMBL:AADN02052962 EMBL:AADN02052963
IPI:IPI00603564 Ensembl:ENSGALT00000002196 Uniprot:F1NUJ8
Length = 320
Score = 119 (46.9 bits), Expect = 3.3e-06, Sum P(3) = 3.3e-06
Identities = 36/133 (27%), Positives = 62/133 (46%)
Query: 41 SQERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTK 100
S ER GH+ + ++ ++ L SGS D+ + +WS + + + GH V C +
Sbjct: 11 SLERHFRGHRDAITSVDFSLNKKQLASGSMDSCLKIWSMKPQMRAYCL-VGHKDAVMCVQ 69
Query: 101 FVPETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVEVGNP 160
F P S LV SG+ D V L+ + G S +++ HT V+ +
Sbjct: 70 FSP--SGHLVASGSRDKTVCLW-VPSVKGE---------STVFKAHTATVRSVHFSSDGQ 117
Query: 161 HVVWSASEDGTLR 173
+V +AS+D T++
Sbjct: 118 SLV-TASDDKTIK 129
Score = 106 (42.4 bits), Expect = 9.6e-05, Sum P(3) = 9.6e-05
Identities = 24/77 (31%), Positives = 41/77 (53%)
Query: 47 EGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPETS 106
+ H V ++ ++S G L++ SDD I VW+ +K L S+ H V C +F P+
Sbjct: 101 KAHTATVRSVHFSSDGQSLVTASDDKTIKVWTVHRQKFLFSLSQ-HINWVRCARFSPD-- 157
Query: 107 DELVVSGAGDAEVRLFN 123
L+ S + D V+L++
Sbjct: 158 GRLIASASDDKTVKLWD 174
Score = 54 (24.1 bits), Expect = 3.3e-06, Sum P(3) = 3.3e-06
Identities = 23/76 (30%), Positives = 37/76 (48%)
Query: 263 CVNYFCPMHLSEHGRSSLHLTHVTFSPNGEEVLLSYSGEHVYLMDVNHAGGRAMR-YTVG 321
C++ FC EHG + HV F P+G + + + + V + DV R ++ Y V
Sbjct: 180 CIHSFC-----EHGGFA---NHVEFHPSGTCIAAAGTDKTVKVWDVRM--NRLLQHYQVH 229
Query: 322 DAS-KIMSFTPTLNGL 336
A+ +SF P+ N L
Sbjct: 230 TAAVNSLSFHPSGNYL 245
Score = 47 (21.6 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 16/59 (27%), Positives = 27/59 (45%)
Query: 612 VIDMKQ-RYVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDE 669
V D++ R + H V T + G+Y+ + S+D I + GRL+ L G +
Sbjct: 214 VWDVRMNRLLQHYQVHTAAVNSLSFHPSGNYLITASNDSTLKILDLLEGRLLYTLHGHQ 272
Score = 46 (21.3 bits), Expect = 3.3e-06, Sum P(3) = 3.3e-06
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 639 GDYIASGSDDGRWFIWE 655
GD+ ASG D + +W+
Sbjct: 284 GDFFASGGSDEQVMVWK 300
Score = 43 (20.2 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 11/22 (50%), Positives = 13/22 (59%)
Query: 639 GDYIASGSDDGRWFIWEKQTGR 660
G IAS SDD +W+K T R
Sbjct: 158 GRLIASASDDKTVKLWDK-TSR 178
>UNIPROTKB|P93397 [details] [associations]
symbol:P93397 "Guanine nucleotide-binding protein subunit
beta-1" species:4097 "Nicotiana tabacum" [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0004871 PRINTS:PR00319 InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:Z84820 PIR:T04086 ProteinModelPortal:P93397
IntAct:P93397 Uniprot:P93397
Length = 377
Score = 95 (38.5 bits), Expect = 3.6e-06, Sum P(3) = 3.6e-06
Identities = 24/82 (29%), Positives = 43/82 (52%)
Query: 44 RELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVP 103
R L+GH G V ++ W + + ++S S D + VW+ + + H+I+ + + C F P
Sbjct: 59 RILQGHTGKVYSLDWTPEKNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCA-FSP 117
Query: 104 ETSDELVVSGAGDAEVRLFNLS 125
S + V G D+ +FNL+
Sbjct: 118 --SGQSVACGGLDSVCSIFNLN 137
Score = 77 (32.2 bits), Expect = 3.6e-06, Sum P(3) = 3.6e-06
Identities = 22/63 (34%), Positives = 32/63 (50%)
Query: 188 SSHQECRNILLDLRCGAKRSLADPPKQ---TLSLKSCDISSTRPHLLLVGGSDAFARLYD 244
S Q C +L D+ G + S+ Q T ++S ISS+ P L + G D ARL+D
Sbjct: 176 SGDQTC--VLWDITTGLRTSVFGGEFQSGHTADVQSVSISSSNPRLFVSGSCDTTARLWD 233
Query: 245 RRM 247
R+
Sbjct: 234 TRV 236
Score = 53 (23.7 bits), Expect = 3.6e-06, Sum P(3) = 3.6e-06
Identities = 11/39 (28%), Positives = 20/39 (51%)
Query: 270 MHLSEHGRSSL-HLTHVTFSPNGEEVLLSYSGEHVYLMD 307
++ HG + H+T + FS +G + + YS Y+ D
Sbjct: 285 VYYQPHGDGDIPHVTSMAFSISGRLLFVGYSNGDCYVWD 323
>UNIPROTKB|Q676U5 [details] [associations]
symbol:ATG16L1 "Autophagy-related protein 16-1"
species:9606 "Homo sapiens" [GO:0015031 "protein transport"
evidence=IEA] [GO:0000421 "autophagic vacuole membrane"
evidence=IEA] [GO:0034045 "pre-autophagosomal structure membrane"
evidence=IEA] [GO:0005776 "autophagic vacuole" evidence=ISS]
[GO:0051260 "protein homooligomerization" evidence=NAS] [GO:0000045
"autophagic vacuole assembly" evidence=NAS] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015031 EMBL:CH471063 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AY398617 EMBL:EF079889
EMBL:EF079890 EMBL:AY358182 EMBL:AK026330 EMBL:AK027854
EMBL:AK123876 EMBL:AC013726 EMBL:BC071846 EMBL:AL834526
IPI:IPI00432751 IPI:IPI00446614 IPI:IPI00470446 IPI:IPI00555905
IPI:IPI00797150 RefSeq:NP_001177195.1 RefSeq:NP_001177196.1
RefSeq:NP_060444.3 RefSeq:NP_110430.5 RefSeq:NP_942593.2
UniGene:Hs.529322 PDB:4GDK PDB:4GDL PDBsum:4GDK PDBsum:4GDL
ProteinModelPortal:Q676U5 SMR:Q676U5 DIP:DIP-27552N IntAct:Q676U5
MINT:MINT-1141152 STRING:Q676U5 PhosphoSite:Q676U5 DMDM:62510482
PaxDb:Q676U5 PRIDE:Q676U5 DNASU:55054 Ensembl:ENST00000347464
Ensembl:ENST00000373525 Ensembl:ENST00000392017
Ensembl:ENST00000392020 GeneID:55054 KEGG:hsa:55054 UCSC:uc002vty.3
UCSC:uc002vtz.3 UCSC:uc002vua.3 CTD:55054 GeneCards:GC02P234118
HGNC:HGNC:21498 HPA:HPA012577 MIM:610767 MIM:611081
neXtProt:NX_Q676U5 Orphanet:206 PharmGKB:PA134902949
HOGENOM:HOG000112569 HOVERGEN:HBG050534 OrthoDB:EOG4SXNC8
GenomeRNAi:55054 NextBio:58531 ArrayExpress:Q676U5 Bgee:Q676U5
CleanEx:HS_ATG16L1 Genevestigator:Q676U5 GermOnline:ENSG00000085978
GO:GO:0005776 GO:GO:0000421 GO:GO:0034045 GO:GO:0000045
GO:GO:0051260 InterPro:IPR013923 Pfam:PF08614 Uniprot:Q676U5
Length = 607
Score = 117 (46.2 bits), Expect = 4.5e-06, Sum P(2) = 4.5e-06
Identities = 31/108 (28%), Positives = 56/108 (51%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPET 105
L G + +I ++S GS L++ S+D +W+ +L H++ TGHS V KF+ +
Sbjct: 362 LSGSNAGITSIEFDSAGSYLLAASNDFASRIWTVDDYRLRHTL-TGHSGKVLSAKFLLDN 420
Query: 106 SDELVVSGAGDAEVRLFNL-SR------FSGRGLDDNAITPSALYQCH 146
+ +VSG+ D ++L++L S+ F+G +D T + H
Sbjct: 421 AR--IVSGSHDRTLKLWDLRSKVCIKTVFAGSSCNDIVCTEQCVMSGH 466
Score = 72 (30.4 bits), Expect = 4.5e-06, Sum P(2) = 4.5e-06
Identities = 15/48 (31%), Positives = 27/48 (56%)
Query: 626 GTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAGNV 673
G+D + F G Y+A+GS +G +IW TG++ K+L + ++
Sbjct: 534 GSDWTRVVF-SPDGSYVAAGSAEGSLYIWSVLTGKVEKVLSKQHSSSI 580
>WB|WBGene00004767 [details] [associations]
symbol:sel-10 species:6239 "Caenorhabditis elegans"
[GO:0008593 "regulation of Notch signaling pathway" evidence=IGI]
[GO:0030424 "axon" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0046660
GO:GO:0045746 GeneTree:ENSGT00690000101849 KO:K10260 OMA:EECLHTL
HOGENOM:HOG000236264 EMBL:Z79757 EMBL:AF020788 PIR:T22703
RefSeq:NP_001023975.1 RefSeq:NP_506421.1 UniGene:Cel.2743
ProteinModelPortal:Q93794 SMR:Q93794 IntAct:Q93794 MINT:MINT-115740
STRING:Q93794 PRIDE:Q93794 EnsemblMetazoa:F55B12.3a GeneID:179878
KEGG:cel:CELE_F55B12.3 UCSC:F55B12.3b.1 CTD:179878
WormBase:F55B12.3a WormBase:F55B12.3b InParanoid:Q93794
NextBio:907238 Uniprot:Q93794
Length = 587
Score = 128 (50.1 bits), Expect = 4.6e-06, Sum P(2) = 4.6e-06
Identities = 46/140 (32%), Positives = 67/140 (47%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPET 105
L+GH V ++ GS+L++GS DT + VW S + L ++ GH A V C +F T
Sbjct: 334 LQGHTSTVRCMAM--AGSILVTGSRDTTLRVWDVESGRHLATLH-GHHAAVRCVQFDGTT 390
Query: 106 SDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVEVGNPHVVWS 165
VVSG D V+++N +GR + +T H RV L E +V S
Sbjct: 391 ----VVSGGYDFTVKIWNAH--TGRCI--RTLTG------HNNRVYSLLFE-SERSIVCS 435
Query: 166 ASEDGTLRQHDFR--QGSSC 183
S D ++R DF +G C
Sbjct: 436 GSLDTSIRVWDFTRPEGQEC 455
Score = 107 (42.7 bits), Expect = 0.00080, Sum P(2) = 0.00080
Identities = 28/87 (32%), Positives = 47/87 (54%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPET 105
L GH G V + G ++SGS D + VWS LLH+++ GH++ V C
Sbjct: 292 LVGHTGGVWTSQISQCGRYIVSGSTDRTVKVWSTVDGSLLHTLQ-GHTSTVRCMAM---- 346
Query: 106 SDELVVSGAGDAEVRLFNLSRFSGRGL 132
+ ++V+G+ D +R++++ SGR L
Sbjct: 347 AGSILVTGSRDTTLRVWDVE--SGRHL 371
Score = 60 (26.2 bits), Expect = 4.6e-06, Sum P(2) = 4.6e-06
Identities = 13/32 (40%), Positives = 20/32 (62%)
Query: 642 IASGSDDGRWFIWEKQTGRLIKMLLG-DEAGN 672
+A+ SDDG +W+ + G LI+ L+ D GN
Sbjct: 517 VATSSDDGTVKLWDIERGALIRDLVTLDSGGN 548
Score = 47 (21.6 bits), Expect = 9.7e-05, Sum P(2) = 9.7e-05
Identities = 12/44 (27%), Positives = 22/44 (50%)
Query: 638 RGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAGNVISSMEECG 681
RG+ + S + D +W+ G + ML G + I+S++ G
Sbjct: 472 RGNILVSCNADSHVRVWDIHEGTCVHMLSGHRSA--ITSLQWFG 513
>UNIPROTKB|Q93794 [details] [associations]
symbol:sel-10 "F-box/WD repeat-containing protein sel-10"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] [GO:0030424 "axon" evidence=IDA] [GO:0046660 "female
sex differentiation" evidence=IMP] [GO:0045746 "negative regulation
of Notch signaling pathway" evidence=IGI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0046660 GO:GO:0045746
GeneTree:ENSGT00690000101849 KO:K10260 OMA:EECLHTL
HOGENOM:HOG000236264 EMBL:Z79757 EMBL:AF020788 PIR:T22703
RefSeq:NP_001023975.1 RefSeq:NP_506421.1 UniGene:Cel.2743
ProteinModelPortal:Q93794 SMR:Q93794 IntAct:Q93794 MINT:MINT-115740
STRING:Q93794 PRIDE:Q93794 EnsemblMetazoa:F55B12.3a GeneID:179878
KEGG:cel:CELE_F55B12.3 UCSC:F55B12.3b.1 CTD:179878
WormBase:F55B12.3a WormBase:F55B12.3b InParanoid:Q93794
NextBio:907238 Uniprot:Q93794
Length = 587
Score = 128 (50.1 bits), Expect = 4.6e-06, Sum P(2) = 4.6e-06
Identities = 46/140 (32%), Positives = 67/140 (47%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPET 105
L+GH V ++ GS+L++GS DT + VW S + L ++ GH A V C +F T
Sbjct: 334 LQGHTSTVRCMAM--AGSILVTGSRDTTLRVWDVESGRHLATLH-GHHAAVRCVQFDGTT 390
Query: 106 SDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVEVGNPHVVWS 165
VVSG D V+++N +GR + +T H RV L E +V S
Sbjct: 391 ----VVSGGYDFTVKIWNAH--TGRCI--RTLTG------HNNRVYSLLFE-SERSIVCS 435
Query: 166 ASEDGTLRQHDFR--QGSSC 183
S D ++R DF +G C
Sbjct: 436 GSLDTSIRVWDFTRPEGQEC 455
Score = 107 (42.7 bits), Expect = 0.00080, Sum P(2) = 0.00080
Identities = 28/87 (32%), Positives = 47/87 (54%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPET 105
L GH G V + G ++SGS D + VWS LLH+++ GH++ V C
Sbjct: 292 LVGHTGGVWTSQISQCGRYIVSGSTDRTVKVWSTVDGSLLHTLQ-GHTSTVRCMAM---- 346
Query: 106 SDELVVSGAGDAEVRLFNLSRFSGRGL 132
+ ++V+G+ D +R++++ SGR L
Sbjct: 347 AGSILVTGSRDTTLRVWDVE--SGRHL 371
Score = 60 (26.2 bits), Expect = 4.6e-06, Sum P(2) = 4.6e-06
Identities = 13/32 (40%), Positives = 20/32 (62%)
Query: 642 IASGSDDGRWFIWEKQTGRLIKMLLG-DEAGN 672
+A+ SDDG +W+ + G LI+ L+ D GN
Sbjct: 517 VATSSDDGTVKLWDIERGALIRDLVTLDSGGN 548
Score = 47 (21.6 bits), Expect = 9.7e-05, Sum P(2) = 9.7e-05
Identities = 12/44 (27%), Positives = 22/44 (50%)
Query: 638 RGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAGNVISSMEECG 681
RG+ + S + D +W+ G + ML G + I+S++ G
Sbjct: 472 RGNILVSCNADSHVRVWDIHEGTCVHMLSGHRSA--ITSLQWFG 513
>RGD|1310631 [details] [associations]
symbol:Atg16l1 "autophagy related 16-like 1 (S. cerevisiae)"
species:10116 "Rattus norvegicus" [GO:0000421 "autophagic vacuole
membrane" evidence=ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005776 "autophagic vacuole" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1310631 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013923 Pfam:PF08614
IPI:IPI00766621 ProteinModelPortal:D3ZLV2
Ensembl:ENSRNOT00000056840 UCSC:RGD:1310631 ArrayExpress:D3ZLV2
Uniprot:D3ZLV2
Length = 605
Score = 113 (44.8 bits), Expect = 5.9e-06, Sum P(2) = 5.9e-06
Identities = 24/79 (30%), Positives = 46/79 (58%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPET 105
L G + +I ++S G+ L++ S+D +W+ +L H++ TGHS V KF+ +
Sbjct: 343 LSGSNAGITSIEFDSAGAYLLAASNDFASRIWTVDDYRLRHTL-TGHSGKVLSAKFLLDN 401
Query: 106 SDELVVSGAGDAEVRLFNL 124
+ +VSG+ D ++L++L
Sbjct: 402 AR--IVSGSHDRTLKLWDL 418
Score = 75 (31.5 bits), Expect = 5.9e-06, Sum P(2) = 5.9e-06
Identities = 15/48 (31%), Positives = 27/48 (56%)
Query: 626 GTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAGNV 673
G+D + F G Y+A+GS DG ++W TG++ K+L + ++
Sbjct: 532 GSDWTRVVF-SPDGSYVAAGSADGSLYVWSVLTGKVEKVLSKQHSSSI 578
>DICTYBASE|DDB_G0288375 [details] [associations]
symbol:lis1 "lissencephaly-1 homolog protein"
species:44689 "Dictyostelium discoideum" [GO:0071539 "protein
localization to centrosome" evidence=IMP] [GO:0019933
"cAMP-mediated signaling" evidence=IGI] [GO:0051645 "Golgi
localization" evidence=IMP] [GO:0051642 "centrosome localization"
evidence=IMP] [GO:0045504 "dynein heavy chain binding"
evidence=IPI] [GO:0031592 "centrosomal corona" evidence=IDA]
[GO:0017048 "Rho GTPase binding" evidence=IPI] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0051301 "cell division" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 dictyBase:DDB_G0288375
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0019933 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CM000154_GR GO:GO:0051642
GO:GO:0051645 EMBL:AAFI02000111 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 HSSP:P63005 GO:GO:0031592 GO:GO:0071539 KO:K01062
OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AJ512336
EMBL:AJ512794 RefSeq:XP_636715.1 ProteinModelPortal:Q8I0F4
SMR:Q8I0F4 STRING:Q8I0F4 EnsemblProtists:DDB0219930 GeneID:8626591
KEGG:ddi:DDB_G0288375 ProtClustDB:CLSZ2429884 Uniprot:Q8I0F4
Length = 419
Score = 113 (44.8 bits), Expect = 6.8e-06, Sum P(2) = 6.8e-06
Identities = 38/163 (23%), Positives = 75/163 (46%)
Query: 39 RLSQERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFC 98
R ++ L GH+ C+N++ ++ SL++S S+D I VW + S + +++ GH+ V
Sbjct: 95 RPPEKHILTGHRNCINSVKFHPSFSLMVSASEDATIKVWDFESGEFERTLK-GHTNAVQD 153
Query: 99 TKFVPETSDELVVSGAGDAEVRLFNLSRFSG----RGLDDNA----ITPSALYQCHTRRV 150
F + + L+ S + D ++L++ + G D N TPS + R
Sbjct: 154 IDF--DKTGNLLASCSADLTIKLWDFQTYDCVKTLHGHDHNVSCVRFTPSGDQLISSSRD 211
Query: 151 KKLAV-EVGNPHVVWS-ASEDGTLRQHDFRQGSSCPPAGSSHQ 191
K + V E + + + + +R+ + SC + S+ Q
Sbjct: 212 KTIKVWEAATGYCIKTLVGHEDWVRKITVSEDGSCIASCSNDQ 254
Score = 70 (29.7 bits), Expect = 6.8e-06, Sum P(2) = 6.8e-06
Identities = 22/83 (26%), Positives = 36/83 (43%)
Query: 605 IPYQPETVIDMKQRYVGHCNVGTDIKQA---SFLGQRGDYIASGSDDGRWFIWEKQTGRL 661
+ + +ID+ + + +KQ + +GQ G Y+A+GS D IWE TGR
Sbjct: 280 LAFSTANIIDIPGSLLSTPEGKSKVKQGPGGNLVGQCG-YLATGSRDKTIKIWELATGRC 338
Query: 662 IKMLLGDEAGNVISSMEECGLLL 684
+ +G + CG L
Sbjct: 339 LATYIGHDNWVRAVRFHPCGKFL 361
Score = 54 (24.1 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 17/62 (27%), Positives = 29/62 (46%)
Query: 619 YVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAGNVISSME 678
Y+GH N ++ F G ++ S DD +W+ GR IK + + + IS ++
Sbjct: 342 YIGHDNW---VRAVRF-HPCGKFLLSVGDDKTIRVWDIAQGRCIKTI-NEAHTHFISCLD 396
Query: 679 EC 680
C
Sbjct: 397 FC 398
>RGD|628746 [details] [associations]
symbol:Copb2 "coatomer protein complex, subunit beta 2 (beta
prime)" species:10116 "Rattus norvegicus" [GO:0000139 "Golgi
membrane" evidence=IDA] [GO:0005080 "protein kinase C binding"
evidence=IPI] [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005794 "Golgi apparatus"
evidence=ISO;IDA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0006891 "intra-Golgi vesicle-mediated transport"
evidence=ISO] [GO:0015629 "actin cytoskeleton" evidence=ISO]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0030126 "COPI vesicle coat"
evidence=ISO] [GO:0030663 "COPI-coated vesicle membrane"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 RGD:628746
GO:GO:0006886 GO:GO:0000139 GO:GO:0030117 GO:GO:0016192
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005198
InterPro:IPR020472 PRINTS:PR00320 CTD:9276 HOVERGEN:HBG051076
InterPro:IPR016453 PIRSF:PIRSF005567 GO:GO:0030663 EMBL:AF002705
IPI:IPI00231953 RefSeq:NP_068533.1 UniGene:Rn.37178
ProteinModelPortal:O35142 IntAct:O35142 PRIDE:O35142 GeneID:60384
KEGG:rno:60384 NextBio:612083 Genevestigator:O35142 Uniprot:O35142
Length = 905
Score = 145 (56.1 bits), Expect = 7.4e-06, Sum P(3) = 7.4e-06
Identities = 31/84 (36%), Positives = 50/84 (59%)
Query: 46 LEGHQGCVNAISWNSKGS--LLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVP 103
LEGH+ VN I + S G LISG+DD + +W Y ++ + + E GH+ NV C F P
Sbjct: 181 LEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTPE-GHAQNVSCATFHP 239
Query: 104 ETSDELVVSGAGDAEVRLFNLSRF 127
E ++++G+ D VR+++ S +
Sbjct: 240 ELP--IIITGSEDGTVRIWHSSTY 261
Score = 46 (21.3 bits), Expect = 7.4e-06, Sum P(3) = 7.4e-06
Identities = 8/35 (22%), Positives = 19/35 (54%)
Query: 269 PMHLSEHGRSSLHLTHVTFSPNGEEVLLSYSGEHV 303
P+ + + G ++ + +PNG V++ GE++
Sbjct: 342 PLAVKDMGSCEIYPQTIQHNPNGRFVVVCGDGEYI 376
Score = 42 (19.8 bits), Expect = 7.4e-06, Sum P(3) = 7.4e-06
Identities = 7/15 (46%), Positives = 11/15 (73%)
Query: 416 KRKWKNDAQMAIRDC 430
++KWK A++AI C
Sbjct: 667 EQKWKQLAELAISKC 681
Score = 37 (18.1 bits), Expect = 2.3e-05, Sum P(3) = 2.3e-05
Identities = 13/44 (29%), Positives = 24/44 (54%)
Query: 356 VATGLGKCRMLVEIARNSLEEGKH-----PYY--G-IEACNEVL 391
+AT G M+ ++A + +GK+ Y+ G ++AC E+L
Sbjct: 702 LATASGNASMVNKLAEGAERDGKNNVAFMSYFLQGKLDACLELL 745
>MGI|MGI:1915086 [details] [associations]
symbol:Wdr83 "WD repeat domain containing 83" species:10090
"Mus musculus" [GO:0000375 "RNA splicing, via transesterification
reactions" evidence=ISO] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013 "catalytic
step 2 spliceosome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1915086 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006397 GO:GO:0071013 GO:GO:0000375
GeneTree:ENSGT00700000104496 HOGENOM:HOG000091642 CTD:84292
HOVERGEN:HBG105288 KO:K13124 OrthoDB:EOG4ZCT4V OMA:CKQGAVR
EMBL:AY365434 EMBL:AK005790 EMBL:AK020654 EMBL:BC005587
EMBL:BC019369 EMBL:BC094624 IPI:IPI00118714 IPI:IPI00407931
IPI:IPI00624217 RefSeq:NP_080675.2 UniGene:Mm.334680
ProteinModelPortal:Q9DAJ4 SMR:Q9DAJ4 STRING:Q9DAJ4
PhosphoSite:Q9DAJ4 PRIDE:Q9DAJ4 Ensembl:ENSMUST00000093357
Ensembl:ENSMUST00000149050 GeneID:67836 KEGG:mmu:67836
UCSC:uc009mph.1 InParanoid:Q9DAJ4 NextBio:325661 Bgee:Q9DAJ4
CleanEx:MM_1500041N16RIK Genevestigator:Q9DAJ4
GermOnline:ENSMUSG00000005150 Uniprot:Q9DAJ4
Length = 315
Score = 106 (42.4 bits), Expect = 7.8e-06, Sum P(2) = 7.8e-06
Identities = 24/81 (29%), Positives = 44/81 (54%)
Query: 44 RELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVP 103
R+ GH G VN + +N + ++++SGS D+ + W SRK ++T A +
Sbjct: 103 RKFRGHAGKVNTVQFNEEATVILSGSIDSSVRCWDCRSRKP-EPVQTLDEARDGISSV-- 159
Query: 104 ETSDELVVSGAGDAEVRLFNL 124
+ SD +++G+ D VR ++L
Sbjct: 160 KVSDHEILAGSVDGRVRRYDL 180
Score = 73 (30.8 bits), Expect = 7.8e-06, Sum P(2) = 7.8e-06
Identities = 20/59 (33%), Positives = 28/59 (47%)
Query: 619 YVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAGNVISSM 677
YVGH N K L +R ++ S S+DG+ F W+ G L L NV+ S+
Sbjct: 229 YVGHKN--QQYKLDCCLSERDTHVVSCSEDGKVFFWDLVEGALALAL--PVGSNVVQSL 283
Score = 71 (30.1 bits), Expect = 6.9e-05, Sum P(3) = 6.9e-05
Identities = 27/89 (30%), Positives = 45/89 (50%)
Query: 40 LSQER--ELEGHQGCVNAISWNSKGSLLIS-GSDDTHINVWSYSSRKLLHSIETGHSANV 96
L Q+R L+ QG V A+ +N G+ ++ GSD T + +W+ LL + +GH V
Sbjct: 13 LPQKRMKTLDCSQGAVRAVRFNVDGNYCLTCGSDKT-LKLWNPLRGTLLRTY-SGHGYEV 70
Query: 97 FCTKFVPETSDELVVSGAGDAEVRLFNLS 125
+ S + SG GD V L++++
Sbjct: 71 LDAAGSFDNSH--LCSGGGDKTVVLWDVA 97
Score = 67 (28.6 bits), Expect = 6.9e-05, Sum P(3) = 6.9e-05
Identities = 29/93 (31%), Positives = 40/93 (43%)
Query: 162 VVWSASEDGTLRQHDFRQGSSCPPAGSSHQECRNIL---LD--LRCGAKRSLADPPKQTL 216
V+W + +R+ FR + ++E IL +D +RC RS P QTL
Sbjct: 92 VLWDVATGQVVRK--FRGHAGKVNTVQFNEEATVILSGSIDSSVRCWDCRSRKPEPVQTL 149
Query: 217 SLKSCDISSTR--PHLLLVGGSDAFARLYDRRM 247
ISS + H +L G D R YD RM
Sbjct: 150 DEARDGISSVKVSDHEILAGSVDGRVRRYDLRM 182
>TAIR|locus:2161840 [details] [associations]
symbol:TEX1 "AT5G56130" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0010267 "production of
ta-siRNAs involved in RNA interference" evidence=IMP] [GO:0031047
"gene silencing by RNA" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 KO:K12880 GO:GO:0010267
EMBL:AB011476 HSSP:P16649 GO:GO:0080008 HOGENOM:HOG000264781
OMA:LAYACDD UniGene:At.29405 UniGene:At.29406 EMBL:AY093120
EMBL:BT000174 IPI:IPI00517881 RefSeq:NP_200424.1
ProteinModelPortal:Q9FKT5 SMR:Q9FKT5 STRING:Q9FKT5 PaxDb:Q9FKT5
PRIDE:Q9FKT5 EnsemblPlants:AT5G56130.1 GeneID:835712
KEGG:ath:AT5G56130 TAIR:At5g56130 InParanoid:Q9FKT5
PhylomeDB:Q9FKT5 ProtClustDB:CLSN2687157 ArrayExpress:Q9FKT5
Genevestigator:Q9FKT5 Uniprot:Q9FKT5
Length = 315
Score = 118 (46.6 bits), Expect = 7.9e-06, Sum P(3) = 7.9e-06
Identities = 29/83 (34%), Positives = 47/83 (56%)
Query: 44 RELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYS--SRKLLHSIET-GHSANVFCTK 100
RE +GH+ V++++WNS G+ L SGS D +W+ +E GH+ +V
Sbjct: 14 REYQGHKKKVHSVAWNSNGTKLASGSVDQTARIWNIEPHGHSKAKDLELKGHTDSVDQLC 73
Query: 101 FVPETSDELVVSGAGDAEVRLFN 123
+ P+ SD LV + +GD VRL++
Sbjct: 74 WDPKHSD-LVATASGDKSVRLWD 95
Score = 57 (25.1 bits), Expect = 7.9e-06, Sum P(3) = 7.9e-06
Identities = 19/57 (33%), Positives = 27/57 (47%)
Query: 629 IKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAGNVISSMEECGLLLY 685
++ SF G+YIAS S+D I QTGR + + A N + + LL Y
Sbjct: 236 VRTISF-NYSGEYIASASEDLFIDIANVQTGRTVHQIPCRAAMNSVEWNPKYNLLAY 291
Score = 40 (19.1 bits), Expect = 7.9e-06, Sum P(3) = 7.9e-06
Identities = 6/25 (24%), Positives = 15/25 (60%)
Query: 284 HVTFSPNGEEVLLSYSGEHVYLMDV 308
++T+ P+G V + + + ++DV
Sbjct: 113 NITYKPDGTHVAVGNRDDELTILDV 137
Score = 37 (18.1 bits), Expect = 0.00074, Sum P(3) = 0.00074
Identities = 7/18 (38%), Positives = 10/18 (55%)
Query: 638 RGDYIASGSDDGRWFIWE 655
+G Y A GS D +W+
Sbjct: 202 KGRYFAVGSADSLVSLWD 219
>FB|FBgn0263933 [details] [associations]
symbol:ebi "ebi" species:7227 "Drosophila melanogaster"
[GO:0042058 "regulation of epidermal growth factor receptor
signaling pathway" evidence=IMP] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005525 "GTP binding" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0051726 "regulation of cell
cycle" evidence=IMP] [GO:0007173 "epidermal growth factor receptor
signaling pathway" evidence=TAS] [GO:0030162 "regulation of
proteolysis" evidence=TAS] [GO:0042676 "compound eye cone cell fate
commitment" evidence=TAS] [GO:0007219 "Notch signaling pathway"
evidence=TAS] [GO:0017053 "transcriptional repressor complex"
evidence=IGI;IPI] [GO:0042461 "photoreceptor cell development"
evidence=IMP] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0031065 "positive regulation of histone deacetylation"
evidence=IDA] [GO:0070491 "repressing transcription factor binding"
evidence=IPI] [GO:0001106 "RNA polymerase II transcription
corepressor activity" evidence=IPI] [GO:0035220 "wing disc
development" evidence=IGI;IMP] [GO:0045747 "positive regulation of
Notch signaling pathway" evidence=IGI;IDA] [GO:0005700 "polytene
chromosome" evidence=IDA] [GO:0045572 "positive regulation of
imaginal disc growth" evidence=IGI;IMP] [GO:0022416 "chaeta
development" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005525 GO:GO:0017053 GO:GO:0007173 EMBL:AE014134
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0007601 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030162 GO:GO:0007219 GO:GO:0045747
GO:GO:0003682 GO:GO:0000122 GO:GO:0022416 GO:GO:0035220
GO:GO:0007049 InterPro:IPR013720 Pfam:PF08513 GO:GO:0045572
GO:GO:0005700 GO:GO:0042461 GO:GO:0042058 GO:GO:0031065
GO:GO:0042676 EMBL:AF146345 EMBL:AY061326 RefSeq:NP_477329.1
UniGene:Dm.3639 ProteinModelPortal:Q95RJ9 SMR:Q95RJ9 IntAct:Q95RJ9
MINT:MINT-6540401 STRING:Q95RJ9 PaxDb:Q95RJ9
EnsemblMetazoa:FBtr0078055 GeneID:33212 KEGG:dme:Dmel_CG4063
CTD:33212 FlyBase:FBgn0263933 GeneTree:ENSGT00690000102024
InParanoid:Q95RJ9 KO:K04508 OMA:NRDRCCH OrthoDB:EOG4SF7NC
PhylomeDB:Q95RJ9 GenomeRNAi:33212 NextBio:782461 Bgee:Q95RJ9
GermOnline:CG4063 Uniprot:Q95RJ9
Length = 700
Score = 127 (49.8 bits), Expect = 9.3e-06, Sum P(2) = 9.3e-06
Identities = 36/134 (26%), Positives = 64/134 (47%)
Query: 2 ENFPFHDGSIYDMLDTRHTDTRPDVNHSLQMHSSLVRRLSQERELEGHQGCVNAISWNSK 61
+ F FH D+ D + + ++H + + +GH VNAI W +
Sbjct: 487 QQFAFHSAPALDV-DWQTNQAFASCSTDQRIHVCRLGVNEPIKTFKGHTNEVNAIKWCPQ 545
Query: 62 GSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPE---TSD---ELVVSGAG 115
G LL S SDD + +WS + + H ++ HS ++ K+ P T++ L+++ A
Sbjct: 546 GQLLASCSDDMTLKIWSMNRDRCCHDLQA-HSKEIYTIKWSPTGPGTNNPNTNLILASAS 604
Query: 116 -DAEVRLFNLSRFS 128
D+ VRL+++ R S
Sbjct: 605 FDSTVRLWDVERGS 618
Score = 60 (26.2 bits), Expect = 9.3e-06, Sum P(2) = 9.3e-06
Identities = 13/29 (44%), Positives = 17/29 (58%)
Query: 639 GDYIASGSDDGRWFIWEKQTGRLIKMLLG 667
G ++ASGS D IW QTG+L+ G
Sbjct: 639 GKHLASGSFDKCVHIWSTQTGQLVHSYKG 667
>RGD|1306947 [details] [associations]
symbol:Wdr83 "WD repeat domain 83" species:10116 "Rattus
norvegicus" [GO:0000375 "RNA splicing, via transesterification
reactions" evidence=IEA;ISO] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO] [GO:0005681 "spliceosomal complex"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1306947 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397 GO:GO:0071013
GO:GO:0000375 CTD:84292 HOVERGEN:HBG105288 KO:K13124
OrthoDB:EOG4ZCT4V EMBL:AY940050 IPI:IPI00209921
RefSeq:NP_001041312.1 UniGene:Rn.3570 ProteinModelPortal:Q5BLX8
PRIDE:Q5BLX8 GeneID:288924 KEGG:rno:288924 InParanoid:Q5BLX8
NextBio:629000 Genevestigator:Q5BLX8 Uniprot:Q5BLX8
Length = 315
Score = 106 (42.4 bits), Expect = 9.9e-06, Sum P(2) = 9.9e-06
Identities = 24/81 (29%), Positives = 44/81 (54%)
Query: 44 RELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVP 103
R+ GH G VN + +N + ++++SGS D+ + W SRK ++T A +
Sbjct: 103 RKFRGHAGKVNTVQFNEEATVILSGSIDSSVRCWDCRSRKP-EPVQTLDEARDGISSV-- 159
Query: 104 ETSDELVVSGAGDAEVRLFNL 124
+ SD +++G+ D VR ++L
Sbjct: 160 KVSDHEILAGSVDGRVRRYDL 180
Score = 72 (30.4 bits), Expect = 9.9e-06, Sum P(2) = 9.9e-06
Identities = 20/59 (33%), Positives = 28/59 (47%)
Query: 619 YVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAGNVISSM 677
YVGH N K L +R ++ S S+DG+ F W+ G L L NV+ S+
Sbjct: 229 YVGHKN--QKYKLDCCLSERDTHVVSCSEDGKVFFWDLVEGSLALAL--PVGSNVVQSL 283
Score = 71 (30.1 bits), Expect = 8.8e-05, Sum P(3) = 8.8e-05
Identities = 25/85 (29%), Positives = 43/85 (50%)
Query: 42 QERELEGHQGCVNAISWNSKGSLLIS-GSDDTHINVWSYSSRKLLHSIETGHSANVFCTK 100
Q + L+ QG V A+ +N G+ ++ GSD T + +W+ LL + +GH V
Sbjct: 17 QLKTLDCGQGAVRAVRFNVDGNYCLTCGSDKT-LKLWNPLRGTLLRTY-SGHGYEVLDAA 74
Query: 101 FVPETSDELVVSGAGDAEVRLFNLS 125
+ S + SG GD V L++++
Sbjct: 75 GSFDNSH--LCSGGGDKTVVLWDVA 97
Score = 67 (28.6 bits), Expect = 8.8e-05, Sum P(3) = 8.8e-05
Identities = 29/93 (31%), Positives = 40/93 (43%)
Query: 162 VVWSASEDGTLRQHDFRQGSSCPPAGSSHQECRNIL---LD--LRCGAKRSLADPPKQTL 216
V+W + +R+ FR + ++E IL +D +RC RS P QTL
Sbjct: 92 VLWDVATGQVVRK--FRGHAGKVNTVQFNEEATVILSGSIDSSVRCWDCRSRKPEPVQTL 149
Query: 217 SLKSCDISSTR--PHLLLVGGSDAFARLYDRRM 247
ISS + H +L G D R YD RM
Sbjct: 150 DEARDGISSVKVSDHEILAGSVDGRVRRYDLRM 182
>UNIPROTKB|E2R5F8 [details] [associations]
symbol:ATG16L1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0000421 "autophagic vacuole membrane"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GeneTree:ENSGT00700000104505 InterPro:IPR020472
PRINTS:PR00320 CTD:55054 GO:GO:0000421 InterPro:IPR013923
Pfam:PF08614 OMA:LETECQE EMBL:AAEX03014453 RefSeq:XP_850664.1
ProteinModelPortal:E2R5F8 Ensembl:ENSCAFT00000018720 GeneID:477412
KEGG:cfa:477412 NextBio:20852897 Uniprot:E2R5F8
Length = 607
Score = 117 (46.2 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 31/108 (28%), Positives = 56/108 (51%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPET 105
L G + +I ++S GS L++ S+D +W+ +L H++ TGHS V KF+ +
Sbjct: 362 LSGSNAGITSIEFDSAGSYLLAASNDFASRIWTVDDYRLRHTL-TGHSGKVLSAKFLLDN 420
Query: 106 SDELVVSGAGDAEVRLFNL-SR------FSGRGLDDNAITPSALYQCH 146
+ +VSG+ D ++L++L S+ F+G +D T + H
Sbjct: 421 AR--IVSGSHDRTLKLWDLRSKVCIKTVFAGSSCNDIVCTEQCVMSGH 466
Score = 68 (29.0 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 16/52 (30%), Positives = 31/52 (59%)
Query: 626 GTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAGNVISSM 677
G+D + F G Y+A+GS +G +IW +G++ K+L + G+ I+++
Sbjct: 534 GSDWTRVVF-SPDGGYVAAGSAEGSLYIWSVLSGKVEKVL-SKQHGSSINAV 583
>MGI|MGI:1924290 [details] [associations]
symbol:Atg16l1 "autophagy related 16-like 1 (S. cerevisiae)"
species:10090 "Mus musculus" [GO:0000045 "autophagic vacuole
assembly" evidence=TAS] [GO:0000421 "autophagic vacuole membrane"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005776 "autophagic
vacuole" evidence=IDA] [GO:0006810 "transport" evidence=IEA]
[GO:0006914 "autophagy" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1924290 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015031 eggNOG:COG2319
GeneTree:ENSGT00700000104505 InterPro:IPR020472 PRINTS:PR00320
CTD:55054 HOVERGEN:HBG050534 OrthoDB:EOG4SXNC8 GO:GO:0000421
GO:GO:0034045 GO:GO:0000045 InterPro:IPR013923 Pfam:PF08614
EMBL:AB087879 EMBL:AB087880 EMBL:AB087881 EMBL:AK005181
EMBL:AK030983 EMBL:AK131120 EMBL:BC049122 IPI:IPI00223832
IPI:IPI00403350 IPI:IPI00554838 IPI:IPI00554885 IPI:IPI01027707
RefSeq:NP_001192320.1 RefSeq:NP_084122.2 UniGene:Mm.272972
UniGene:Mm.456099 ProteinModelPortal:Q8C0J2 SMR:Q8C0J2
DIP:DIP-31966N IntAct:Q8C0J2 MINT:MINT-136268 STRING:Q8C0J2
PhosphoSite:Q8C0J2 REPRODUCTION-2DPAGE:Q8C0J2 PaxDb:Q8C0J2
PRIDE:Q8C0J2 Ensembl:ENSMUST00000027512 Ensembl:ENSMUST00000113186
Ensembl:ENSMUST00000113190 GeneID:77040 KEGG:mmu:77040
UCSC:uc007bxl.1 UCSC:uc007bxm.1 OMA:LETECQE NextBio:346354
Bgee:Q8C0J2 CleanEx:MM_ATG16L1 Genevestigator:Q8C0J2
GermOnline:ENSMUSG00000026289 Uniprot:Q8C0J2
Length = 607
Score = 114 (45.2 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 30/108 (27%), Positives = 56/108 (51%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPET 105
L G + +I ++S G+ L++ S+D +W+ +L H++ TGHS V KF+ +
Sbjct: 362 LSGSNAGITSIEFDSAGAYLLAASNDFASRIWTVDDYRLRHTL-TGHSGKVLSAKFLLDN 420
Query: 106 SDELVVSGAGDAEVRLFNL-SR------FSGRGLDDNAITPSALYQCH 146
+ +VSG+ D ++L++L S+ F+G +D T + H
Sbjct: 421 AR--IVSGSHDRTLKLWDLRSKVCIKTVFAGSSCNDIVCTEQCVMSGH 466
Score = 71 (30.1 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 14/48 (29%), Positives = 27/48 (56%)
Query: 626 GTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAGNV 673
G+D + F G Y+A+GS +G ++W TG++ K+L + ++
Sbjct: 534 GSDWTRVVF-SPDGSYVAAGSAEGSLYVWSVLTGKVEKVLSKQHSSSI 580
>DICTYBASE|DDB_G0278285 [details] [associations]
symbol:copB2 "coatomer protein complex beta 2 subunit
(beta prime)" species:44689 "Dictyostelium discoideum" [GO:0030117
"membrane coat" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=ISS]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0030663 "COPI-coated vesicle membrane"
evidence=IEA] [GO:0000139 "Golgi membrane" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0278285 GO:GO:0006886 GO:GO:0016192
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GenomeReviews:CM000152_GR GO:GO:0005198 EMBL:AAFI02000023
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030126
HSSP:P63005 InterPro:IPR016453 PIRSF:PIRSF005567 OMA:LRNKAFG
RefSeq:XP_642264.1 ProteinModelPortal:Q54YD8 STRING:Q54YD8
EnsemblProtists:DDB0233798 GeneID:8621473 KEGG:ddi:DDB_G0278285
ProtClustDB:CLSZ2729111 Uniprot:Q54YD8
Length = 1005
Score = 140 (54.3 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 31/84 (36%), Positives = 51/84 (60%)
Query: 46 LEGHQGCVNAISWNSKGS--LLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVP 103
LEGH+ +N++ + S G LISG+DD + +W Y S+ + ++E GHS NV + P
Sbjct: 182 LEGHEKGINSVEYFSGGEKPYLISGADDKLVKIWDYQSKTCVQTLE-GHSNNVSVVCYHP 240
Query: 104 ETSDELVVSGAGDAEVRLFNLSRF 127
E L++SG+ D V+L++ S +
Sbjct: 241 ELP--LILSGSEDGTVKLWHSSTY 262
>UNIPROTKB|E1BGS8 [details] [associations]
symbol:ATG16L1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0000421 "autophagic vacuole membrane" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GeneTree:ENSGT00700000104505 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0000421 InterPro:IPR013923 Pfam:PF08614
OMA:LETECQE EMBL:DAAA02009276 IPI:IPI00699437
ProteinModelPortal:E1BGS8 Ensembl:ENSBTAT00000005131 Uniprot:E1BGS8
Length = 623
Score = 117 (46.2 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 31/108 (28%), Positives = 56/108 (51%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPET 105
L G + +I ++S GS L++ S+D +W+ +L H++ TGHS V KF+ +
Sbjct: 378 LSGSNAGITSIEFDSAGSYLLAASNDFASRIWTVDDYRLRHTL-TGHSGKVLSAKFLLDN 436
Query: 106 SDELVVSGAGDAEVRLFNL-SR------FSGRGLDDNAITPSALYQCH 146
+ +VSG+ D ++L++L S+ F+G +D T + H
Sbjct: 437 AR--IVSGSHDRTLKLWDLRSKVCIKTVFAGSSCNDIVCTEQCVMSGH 482
Score = 68 (29.0 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 14/40 (35%), Positives = 25/40 (62%)
Query: 626 GTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKML 665
G+D +A F G Y+A+G+ +G +IW +G++ K+L
Sbjct: 550 GSDWTRAVF-SPDGSYVAAGAAEGSLYIWNVLSGKVEKVL 588
>UNIPROTKB|Q40687 [details] [associations]
symbol:LOC_Os03g46650 "Guanine nucleotide-binding protein
subunit beta" species:39947 "Oryza sativa Japonica Group"
[GO:0005515 "protein binding" evidence=IPI] [GO:0007186 "G-protein
coupled receptor signaling pathway" evidence=IEP;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005783 GO:GO:0005886 GO:GO:0009723
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007186 GO:GO:0048527 GO:GO:0009817 GO:GO:0009845
GO:GO:0009887 GO:GO:0004871 GO:GO:0010154 GO:GO:0030968
GO:GO:0009867 PRINTS:PR00319 GO:GO:0080008 HOGENOM:HOG000176356
OMA:CMLWDIE InterPro:IPR016346 PIRSF:PIRSF002394 EMBL:X89737
EMBL:AC133930 PIR:T03765 ProteinModelPortal:Q40687 IntAct:Q40687
STRING:Q40687 EnsemblPlants:LOC_Os03g46650.1 Gramene:Q40687
Uniprot:Q40687
Length = 380
Score = 104 (41.7 bits), Expect = 1.5e-05, Sum P(3) = 1.5e-05
Identities = 25/87 (28%), Positives = 44/87 (50%)
Query: 44 RELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVP 103
R L+GH G V ++ W + + ++S S D + VW+ + + H+I+ H V F P
Sbjct: 60 RTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKL-HCPWVMTCAFAP 118
Query: 104 ETSDELVVSGAGDAEVRLFNLSRFSGR 130
+ + V G D+ +FNL+ + R
Sbjct: 119 --NGQSVACGGLDSACSIFNLNSQADR 143
Score = 63 (27.2 bits), Expect = 1.5e-05, Sum P(3) = 1.5e-05
Identities = 19/63 (30%), Positives = 31/63 (49%)
Query: 188 SSHQECRNILLDLRCGAKRSLAD---PPKQTLSLKSCDISSTRPHLLLVGGSDAFARLYD 244
S Q C +L D+ G + S+ P T + S I+S+ ++ + G DA RL+D
Sbjct: 177 SGDQTC--VLWDVTTGQRISIFGGEFPSGHTADVLSLSINSSNSNMFVSGSCDATVRLWD 234
Query: 245 RRM 247
R+
Sbjct: 235 IRI 237
Score = 51 (23.0 bits), Expect = 1.5e-05, Sum P(3) = 1.5e-05
Identities = 15/46 (32%), Positives = 23/46 (50%)
Query: 619 YVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKM 664
Y GH G DI F G +GSDDG +++ +TG +++
Sbjct: 245 YHGH--EG-DINSVKFFPD-GQRFGTGSDDGTCRLFDVRTGHQLQV 286
Score = 39 (18.8 bits), Expect = 0.00023, Sum P(3) = 0.00023
Identities = 8/26 (30%), Positives = 13/26 (50%)
Query: 282 LTHVTFSPNGEEVLLSYSGEHVYLMD 307
+T + FS +G + YS Y+ D
Sbjct: 301 VTSIAFSISGRLLFAGYSNGDCYVWD 326
>UNIPROTKB|F1SM42 [details] [associations]
symbol:ATG16L1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0000421 "autophagic vacuole membrane" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GeneTree:ENSGT00700000104505 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0000421 InterPro:IPR013923 Pfam:PF08614
OMA:LETECQE EMBL:FP102656 Ensembl:ENSSSCT00000017750 Uniprot:F1SM42
Length = 596
Score = 117 (46.2 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 31/108 (28%), Positives = 56/108 (51%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPET 105
L G + +I ++S GS L++ S+D +W+ +L H++ TGHS V KF+ +
Sbjct: 362 LSGSNAGITSIEFDSAGSYLLAASNDFASRIWTVDDYRLRHTL-TGHSGKVLSAKFLLDN 420
Query: 106 SDELVVSGAGDAEVRLFNL-SR------FSGRGLDDNAITPSALYQCH 146
+ +VSG+ D ++L++L S+ F+G +D T + H
Sbjct: 421 AR--IVSGSHDRTLKLWDLRSKVCIKTVFAGSSCNDIVCTEQCVMSGH 466
Score = 66 (28.3 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 13/40 (32%), Positives = 24/40 (60%)
Query: 626 GTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKML 665
G+D + F G Y+A+GS +G ++W +G++ K+L
Sbjct: 536 GSDWTRVVF-SPDGSYVAAGSAEGSLYVWSVLSGKVEKVL 574
>UNIPROTKB|F1SEX9 [details] [associations]
symbol:WDR83 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0000375 "RNA splicing, via transesterification reactions"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
GO:GO:0000375 GeneTree:ENSGT00700000104496 KO:K13124 OMA:CKQGAVR
EMBL:CU856041 RefSeq:XP_003123369.1 Ensembl:ENSSSCT00000014996
GeneID:100519823 KEGG:ssc:100519823 Uniprot:F1SEX9
Length = 311
Score = 107 (42.7 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 25/81 (30%), Positives = 44/81 (54%)
Query: 44 RELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVP 103
R+ GH G VN + +N + ++++SGS D+ + W SRK ++T A +
Sbjct: 103 RKFRGHAGKVNTVQFNEEATVILSGSIDSSVRCWDCRSRKP-EPVQTLDEARDGISSV-- 159
Query: 104 ETSDELVVSGAGDAEVRLFNL 124
+ SD V++G+ D VR ++L
Sbjct: 160 KVSDHEVLAGSVDGRVRRYDL 180
Score = 71 (30.1 bits), Expect = 0.00021, Sum P(3) = 0.00021
Identities = 27/89 (30%), Positives = 45/89 (50%)
Query: 40 LSQER--ELEGHQGCVNAISWNSKGSLLIS-GSDDTHINVWSYSSRKLLHSIETGHSANV 96
L Q+R L+ QG V A+ +N G+ ++ GSD T + +W+ LL + +GH V
Sbjct: 13 LPQKRLKTLDCGQGAVRAVRFNVDGNYCLTCGSDKT-LKLWNPLRGTLLRTY-SGHGYEV 70
Query: 97 FCTKFVPETSDELVVSGAGDAEVRLFNLS 125
+ S + SG GD V L++++
Sbjct: 71 LDAAGSFDNSS--LCSGGGDKAVVLWDVA 97
Score = 68 (29.0 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 16/47 (34%), Positives = 24/47 (51%)
Query: 619 YVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKML 665
Y GH N + K L +R ++ S S+DG+ F W+ G L+ L
Sbjct: 229 YTGHKN--QEYKLDCCLSERDTHVVSCSEDGKVFFWDLVEGVLVLAL 273
Score = 67 (28.6 bits), Expect = 0.00021, Sum P(3) = 0.00021
Identities = 29/93 (31%), Positives = 40/93 (43%)
Query: 162 VVWSASEDGTLRQHDFRQGSSCPPAGSSHQECRNIL---LD--LRCGAKRSLADPPKQTL 216
V+W + +R+ FR + ++E IL +D +RC RS P QTL
Sbjct: 92 VLWDVASGQVVRK--FRGHAGKVNTVQFNEEATVILSGSIDSSVRCWDCRSRKPEPVQTL 149
Query: 217 SLKSCDISSTR--PHLLLVGGSDAFARLYDRRM 247
ISS + H +L G D R YD RM
Sbjct: 150 DEARDGISSVKVSDHEVLAGSVDGRVRRYDLRM 182
>POMBASE|SPCC126.01c [details] [associations]
symbol:SPCC126.01c "conserved fungal protein"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0008150
"biological_process" evidence=ND] [GO:0043234 "protein complex"
evidence=NAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPCC126.01c GO:GO:0005829 GO:GO:0005634
GO:GO:0043234 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329672 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 PIR:T40905 RefSeq:NP_588444.2
ProteinModelPortal:O94394 EnsemblFungi:SPCC126.01c.1 GeneID:2538691
KEGG:spo:SPCC126.01c OMA:WTASADK OrthoDB:EOG4BK8CJ NextBio:20799877
Uniprot:O94394
Length = 369
Score = 132 (51.5 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 39/137 (28%), Positives = 66/137 (48%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSR--KLLHSIETGHSANVFCTKFVP 103
L GH V + + LL+SGS D + VW SS+ +LL+ + TGHS + C P
Sbjct: 128 LIGHTDYVKCLLLLEEEGLLLSGSTDASLIVWDVSSQPSRLLYKL-TGHSRGIECITRQP 186
Query: 104 ETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVEVGNPHVV 163
T D G+ ++ +R +++++ G L++ + H V L + + +
Sbjct: 187 NT-DIFWTCGS-ESSIRCWHITKVGGSQLEEEG------FWGHQSNVYCLLFDPQDSEAL 238
Query: 164 WSASEDGTLRQHDFRQG 180
W+AS D T+R+ QG
Sbjct: 239 WTASADKTVREWSLYQG 255
>GENEDB_PFALCIPARUM|PF08_0019 [details] [associations]
symbol:PF08_0019 "receptor for activated C
kinase homolog, PfRACK" species:5833 "Plasmodium falciparum"
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=ISS] [GO:0005080 "protein kinase C binding" evidence=ISS]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
GO:GO:0016301 HSSP:P16649 HOGENOM:HOG000091643 KO:K14753
OMA:IRVWQVM EMBL:AL844507 GenomeReviews:AL844507_GR
RefSeq:XP_001349258.1 ProteinModelPortal:Q8IBA0 SMR:Q8IBA0
PRIDE:Q8IBA0 EnsemblProtists:PF08_0019:mRNA GeneID:2655468
KEGG:pfa:PF08_0019 EuPathDB:PlasmoDB:PF3D7_0826700
ProtClustDB:CLSZ2430992 Uniprot:Q8IBA0
Length = 323
Score = 118 (46.6 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 25/81 (30%), Positives = 44/81 (54%)
Query: 43 ERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFV 102
++ L GH +N +S +S G +SGS D + +W S + + S GH+++VF F
Sbjct: 65 KKSLTGHSQAINDVSISSDGLFALSGSWDHSVRLWDLSLGETIRSF-IGHTSDVFSVSFS 123
Query: 103 PETSDELVVSGAGDAEVRLFN 123
P+ +VS + D ++L+N
Sbjct: 124 PDNRQ--IVSASRDKTIKLWN 142
Score = 56 (24.8 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 17/64 (26%), Positives = 29/64 (45%)
Query: 614 DMKQRYVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAGNV 673
D+ + GH T + + G ASG DG +W+ + G+ + L E G+
Sbjct: 192 DLNKNLEGH----TGVLNTVTISPDGSLCASGGKDGVAKLWDVKEGKHLYSL---ETGST 244
Query: 674 ISSM 677
I+S+
Sbjct: 245 INSL 248
>UNIPROTKB|Q8IBA0 [details] [associations]
symbol:PfRACK "Receptor for activated C kinase homolog,
PfRACK" species:36329 "Plasmodium falciparum 3D7" [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
GO:GO:0016301 HSSP:P16649 HOGENOM:HOG000091643 KO:K14753
OMA:IRVWQVM EMBL:AL844507 GenomeReviews:AL844507_GR
RefSeq:XP_001349258.1 ProteinModelPortal:Q8IBA0 SMR:Q8IBA0
PRIDE:Q8IBA0 EnsemblProtists:PF08_0019:mRNA GeneID:2655468
KEGG:pfa:PF08_0019 EuPathDB:PlasmoDB:PF3D7_0826700
ProtClustDB:CLSZ2430992 Uniprot:Q8IBA0
Length = 323
Score = 118 (46.6 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 25/81 (30%), Positives = 44/81 (54%)
Query: 43 ERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFV 102
++ L GH +N +S +S G +SGS D + +W S + + S GH+++VF F
Sbjct: 65 KKSLTGHSQAINDVSISSDGLFALSGSWDHSVRLWDLSLGETIRSF-IGHTSDVFSVSFS 123
Query: 103 PETSDELVVSGAGDAEVRLFN 123
P+ +VS + D ++L+N
Sbjct: 124 PDNRQ--IVSASRDKTIKLWN 142
Score = 56 (24.8 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 17/64 (26%), Positives = 29/64 (45%)
Query: 614 DMKQRYVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAGNV 673
D+ + GH T + + G ASG DG +W+ + G+ + L E G+
Sbjct: 192 DLNKNLEGH----TGVLNTVTISPDGSLCASGGKDGVAKLWDVKEGKHLYSL---ETGST 244
Query: 674 ISSM 677
I+S+
Sbjct: 245 INSL 248
>WB|WBGene00003009 [details] [associations]
symbol:lin-23 species:6239 "Caenorhabditis elegans"
[GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0040015 "negative regulation of multicellular organism growth"
evidence=IMP] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0040035 "hermaphrodite
genitalia development" evidence=IMP] [GO:0010171 "body
morphogenesis" evidence=IMP] [GO:0006898 "receptor-mediated
endocytosis" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0048812 "neuron projection
morphogenesis" evidence=IMP] [GO:0008285 "negative regulation of
cell proliferation" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 SMART:SM01028 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0006898 GO:GO:0005737 GO:GO:0040007
GO:GO:0040010 GO:GO:0008285 GO:GO:0051301 GO:GO:0002119
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0010171 GO:GO:0040011 GO:GO:0048812 SUPFAM:SSF81383
GO:GO:0007049 GO:GO:0040035 GO:GO:0040015 EMBL:FO080748
HOGENOM:HOG000006638 KO:K03362 GeneTree:ENSGT00690000101849
EMBL:AF275253 PIR:T16607 RefSeq:NP_495285.1 UniGene:Cel.17632
ProteinModelPortal:Q09990 SMR:Q09990 STRING:Q09990 PaxDb:Q09990
EnsemblMetazoa:K10B2.1 GeneID:174058 KEGG:cel:CELE_K10B2.1
UCSC:K10B2.1 CTD:174058 WormBase:K10B2.1 InParanoid:Q09990
OMA:IKVWSMD NextBio:882327 Uniprot:Q09990
Length = 665
Score = 135 (52.6 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 49/158 (31%), Positives = 78/158 (49%)
Query: 44 RELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVP 103
R L GH+ + + + +G L++SGS D I +W S L +E GH V C +F
Sbjct: 379 RTLAGHRRGIACLQY--RGRLVVSGSSDNTIRLWDIHSGVCLRVLE-GHEELVRCIRF-- 433
Query: 104 ETSDELVVSGAGDAEVRLFNL-SRFSGRGLDDNAITPSALYQCHTRRVKKLAVEVGNPHV 162
++ +VSGA D ++++++L + R L I +L Q HT RV +L + + +
Sbjct: 434 --DEKRIVSGAYDGKIKVWDLQAALDPRALSSE-ICLCSLVQ-HTGRVFRLQFD--DFQI 487
Query: 163 VWSASEDGTLRQHDFRQGSSCPPAGSSHQECRNILLDL 200
V S+S D T+ DF PP+G R L +L
Sbjct: 488 V-SSSHDDTILIWDFLDA---PPSGLPSSTNRATLPEL 521
>UNIPROTKB|Q09990 [details] [associations]
symbol:lin-23 "F-box/WD repeat-containing protein lin-23"
species:6239 "Caenorhabditis elegans" [GO:0005737 "cytoplasm"
evidence=NAS] [GO:0008285 "negative regulation of cell
proliferation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0005634 GO:GO:0008340 GO:GO:0009792 GO:GO:0006898
GO:GO:0005737 GO:GO:0040007 GO:GO:0040010 GO:GO:0008285
GO:GO:0051301 GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010171 GO:GO:0040011
GO:GO:0048812 SUPFAM:SSF81383 GO:GO:0007049 GO:GO:0040035
GO:GO:0040015 EMBL:FO080748 HOGENOM:HOG000006638 KO:K03362
GeneTree:ENSGT00690000101849 EMBL:AF275253 PIR:T16607
RefSeq:NP_495285.1 UniGene:Cel.17632 ProteinModelPortal:Q09990
SMR:Q09990 STRING:Q09990 PaxDb:Q09990 EnsemblMetazoa:K10B2.1
GeneID:174058 KEGG:cel:CELE_K10B2.1 UCSC:K10B2.1 CTD:174058
WormBase:K10B2.1 InParanoid:Q09990 OMA:IKVWSMD NextBio:882327
Uniprot:Q09990
Length = 665
Score = 135 (52.6 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 49/158 (31%), Positives = 78/158 (49%)
Query: 44 RELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVP 103
R L GH+ + + + +G L++SGS D I +W S L +E GH V C +F
Sbjct: 379 RTLAGHRRGIACLQY--RGRLVVSGSSDNTIRLWDIHSGVCLRVLE-GHEELVRCIRF-- 433
Query: 104 ETSDELVVSGAGDAEVRLFNL-SRFSGRGLDDNAITPSALYQCHTRRVKKLAVEVGNPHV 162
++ +VSGA D ++++++L + R L I +L Q HT RV +L + + +
Sbjct: 434 --DEKRIVSGAYDGKIKVWDLQAALDPRALSSE-ICLCSLVQ-HTGRVFRLQFD--DFQI 487
Query: 163 VWSASEDGTLRQHDFRQGSSCPPAGSSHQECRNILLDL 200
V S+S D T+ DF PP+G R L +L
Sbjct: 488 V-SSSHDDTILIWDFLDA---PPSGLPSSTNRATLPEL 521
>TAIR|locus:2061997 [details] [associations]
symbol:AT2G47410 "AT2G47410" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0009630 "gravitropism"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001487
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00439
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00297 SMART:SM00320
EMBL:CP002685 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 Gene3D:1.20.920.10 SUPFAM:SSF47370 GO:GO:0080008
KO:K11797 IPI:IPI00537086 RefSeq:NP_850474.3 UniGene:At.36365
ProteinModelPortal:F4IL43 PRIDE:F4IL43 EnsemblPlants:AT2G47410.1
GeneID:819354 KEGG:ath:AT2G47410 OMA:CDSSMIP Uniprot:F4IL43
Length = 1520
Score = 139 (54.0 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 42/159 (26%), Positives = 76/159 (47%)
Query: 28 HSLQMHSSLVRRLSQERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHS 87
H++ S++V+++ ++L GH+ V ++ G +I+GSDD + +WS + L S
Sbjct: 214 HAIAKPSTMVQKMQNIKKLRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETALCLAS 273
Query: 88 IETGHSANVFCTKFVPETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHT 147
GH ++ T +++ LV S + D +R++ L G+ P ++ + HT
Sbjct: 274 CR-GHEGDI--TDLAVSSNNALVASASNDFVIRVWRLPD----GM------PISVLRGHT 320
Query: 148 RRVKKLAVEVGNPHV--VWSASEDGTLRQHDFRQGSSCP 184
V +A V + S+S+DGT R D R P
Sbjct: 321 GAVTAIAFSPRQASVYQLLSSSDDGTCRIWDARYSQWLP 359
>FB|FBgn0039705 [details] [associations]
symbol:Atg16 species:7227 "Drosophila melanogaster"
[GO:0005575 "cellular_component" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0010506 "regulation of
autophagy" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE014297 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GeneTree:ENSGT00700000104505
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013923 Pfam:PF08614
OMA:LETECQE HSSP:Q04724 UniGene:Dm.20800 GeneID:326115
KEGG:dme:Dmel_CG31033 FlyBase:FBgn0039705 GenomeRNAi:326115
NextBio:847128 EMBL:BT024267 RefSeq:NP_733313.2 SMR:Q86BR6
IntAct:Q86BR6 MINT:MINT-293011 STRING:Q86BR6
EnsemblMetazoa:FBtr0085528 UCSC:CG31033-RC InParanoid:Q86BR6
Uniprot:Q86BR6
Length = 604
Score = 119 (46.9 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 29/102 (28%), Positives = 54/102 (52%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPET 105
L G +N++ ++S G+ ++ S+D VW+ +L H++ TGHS V K+V E
Sbjct: 358 LSGSSAGINSVDFDSTGAYILGTSNDYGARVWTVMDNRLRHTL-TGHSGKVMAAKYVQEP 416
Query: 106 SDELVVSGAGDAEVRLFNL-------SRFSGRGLDDNAITPS 140
VV+G+ D +++++L ++F+G +D T S
Sbjct: 417 IK--VVTGSHDRTLKIWDLRSIACIETKFAGSSCNDLVTTDS 456
Score = 62 (26.9 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 21/55 (38%), Positives = 25/55 (45%)
Query: 622 HCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDE-AGNVIS 675
H + D +ASF G IA GS DG +IW G L L G A N +S
Sbjct: 529 HFKISCDFARASF-NSSGLKIACGSADGAIYIWNVN-GFLEATLKGHSTAVNAVS 581
>WB|WBGene00012757 [details] [associations]
symbol:Y41C4A.11 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 InterPro:IPR006629
Pfam:PF10601 SMART:SM00714 GeneTree:ENSGT00640000091529
EMBL:AL032627 PIR:T26805 RefSeq:NP_499518.1
ProteinModelPortal:Q9XWU3 SMR:Q9XWU3 PaxDb:Q9XWU3
EnsemblMetazoa:Y41C4A.11 GeneID:189814 KEGG:cel:CELE_Y41C4A.11
UCSC:Y41C4A.11 CTD:189814 WormBase:Y41C4A.11 HOGENOM:HOG000006329
InParanoid:Q9XWU3 OMA:ELNFEMG NextBio:943718 Uniprot:Q9XWU3
Length = 386
Score = 131 (51.2 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 31/84 (36%), Positives = 50/84 (59%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANV-FCTKFVPE 104
LEGH+ VN + + + G ++SGSDD I VW ++K + +++ H NV F T F +
Sbjct: 273 LEGHEKGVNCVEFLT-GGRIVSGSDDCSICVWDIQTQKCIETLKNAHKNNVTFVTPF--K 329
Query: 105 TSDELVVSGAGDAEVRLFNLSRFS 128
T ++SGA D+ V+++N FS
Sbjct: 330 T---WIISGAEDSTVKIWNSQTFS 350
>UNIPROTKB|B4DRT0 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9606
"Homo sapiens" [GO:0016581 "NuRD complex" evidence=IEA] [GO:0035098
"ESC/E(Z) complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016581 EMBL:AC114489 UniGene:Hs.16003
HGNC:HGNC:9887 ChiTaRS:RBBP4 EMBL:AK299410 IPI:IPI00983362
SMR:B4DRT0 STRING:B4DRT0 Ensembl:ENST00000544435 UCSC:uc010ohj.2
HOVERGEN:HBG103193 Uniprot:B4DRT0
Length = 173
Score = 119 (46.9 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 36/134 (26%), Positives = 63/134 (47%)
Query: 46 LEGHQGCVNAISWNSKGS-LLISGSDDTHINVWSYSSRKL-LHSIETGHSANVFCTKFVP 103
++ H VN +S+N +L +GS D + +W + KL LHS E+ H +F ++ P
Sbjct: 17 VDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFES-HKDEIFQVQWSP 75
Query: 104 ETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAIT--PSALY--QCHTRRVKKLAVEVGN 159
L SG D + +++LS+ ++A P L+ HT ++ +
Sbjct: 76 HNETILASSGT-DRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNE 134
Query: 160 PHVVWSASEDGTLR 173
P V+ S SED ++
Sbjct: 135 PWVICSVSEDNIMQ 148
>CGD|CAL0005939 [details] [associations]
symbol:TUP1 species:5476 "Candida albicans" [GO:0045892
"negative regulation of transcription, DNA-dependent"
evidence=IGI;ISS;IMP] [GO:0030447 "filamentous growth"
evidence=IMP] [GO:0016337 "cell-cell adhesion" evidence=IMP]
[GO:0045827 "negative regulation of isoprenoid metabolic process"
evidence=IMP] [GO:0009372 "quorum sensing" evidence=IMP]
[GO:0044409 "entry into host" evidence=IMP] [GO:0051834 "evasion or
tolerance of defenses of other organism involved in symbiotic
interaction" evidence=IMP] [GO:0009405 "pathogenesis" evidence=IMP]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0035690 "cellular
response to drug" evidence=IMP] [GO:0071280 "cellular response to
copper ion" evidence=IMP] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0006342 "chromatin silencing" evidence=IEA] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IEA] [GO:0061392 "regulation of
transcription from RNA polymerase II promoter in response to
osmotic stress" evidence=IEA] [GO:0043486 "histone exchange"
evidence=IEA] [GO:2001020 "regulation of response to DNA damage
stimulus" evidence=IEA] [GO:0000433 "negative regulation of
transcription from RNA polymerase II promoter by glucose"
evidence=IEA] [GO:0035955 "negative regulation of dipeptide
transport by negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0016584 "nucleosome
positioning" evidence=IEA] [GO:0043156 "chromatin remodeling in
response to cation stress" evidence=IEA] [GO:0061418 "regulation of
transcription from RNA polymerase II promoter in response to
hypoxia" evidence=IEA] [GO:2000531 "regulation of fatty acid
biosynthetic process by regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0001198 "negative
regulation of mating-type specific transcription from RNA
polymerase II promoter" evidence=IEA] [GO:1900429 "negative
regulation of filamentous growth of a population of unicellular
organisms" evidence=IMP] [GO:0044182 "filamentous growth of a
population of unicellular organisms" evidence=IMP] [GO:0097308
"cellular response to farnesol" evidence=IMP] [GO:0036171
"filamentous growth of a population of unicellular organisms in
response to chemical stimulus" evidence=IMP] [GO:0044114
"development of symbiont in host" evidence=IMP] [GO:0009267
"cellular response to starvation" evidence=IMP] [GO:0036170
"filamentous growth of a population of unicellular organisms in
response to starvation" evidence=IMP] [GO:0036180 "filamentous
growth of a population of unicellular organisms in response to
biotic stimulus" evidence=IMP] [GO:0036166 "phenotypic switching"
evidence=IMP] [GO:0071216 "cellular response to biotic stimulus"
evidence=IMP] [GO:0036033 "mediator complex binding" evidence=IEA]
[GO:0042393 "histone binding" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0080025
"phosphatidylinositol-3,5-bisphosphate binding" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA]
[GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0001191
"RNA polymerase II transcription factor binding transcription
factor activity involved in negative regulation of transcription"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0005939 InterPro:IPR001632 GO:GO:0071216
GO:GO:0036180 GO:GO:0009405 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0000122 GO:GO:0071280
GO:GO:0035690 GO:GO:0009267 GO:GO:0016337 GO:GO:0009372
EMBL:AACQ01000036 EMBL:AACQ01000035 GO:GO:0036170 GO:GO:0044409
PRINTS:PR00319 GO:GO:0036171 GO:GO:1900429 GO:GO:0044114
GO:GO:0036166 GO:GO:0051834 GO:GO:0097308 KO:K06666
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558 RefSeq:XP_718964.1
RefSeq:XP_719068.1 COMPLUYEAST-2DPAGE:P56093 GeneID:3639369
GeneID:3639474 KEGG:cal:CaO19.13528 KEGG:cal:CaO19.6109
GO:GO:0045827 Uniprot:P0CY34
Length = 512
Score = 118 (46.6 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 23/72 (31%), Positives = 45/72 (62%)
Query: 53 VNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPETSDELVVS 112
+ ++ ++ G LL +G++D I +W S+++++ I GH +++ F P+ D LV S
Sbjct: 258 IRSVCFSPDGKLLATGAEDKLIRIWDLSTKRII-KILRGHEQDIYSLDFFPD-GDRLV-S 314
Query: 113 GAGDAEVRLFNL 124
G+GD VR+++L
Sbjct: 315 GSGDRSVRIWDL 326
Score = 61 (26.5 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 15/35 (42%), Positives = 21/35 (60%)
Query: 639 GDYIASGSDDGRWFIWEKQTGRLIKML-LGDEAGN 672
G IA+GS D +W+ TG L++ L G+E GN
Sbjct: 350 GKLIAAGSLDRTVRVWDSTTGFLVERLDSGNENGN 384
Score = 58 (25.5 bits), Expect = 6.0e-05, Sum P(2) = 6.0e-05
Identities = 18/57 (31%), Positives = 26/57 (45%)
Query: 619 YVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAGNVIS 675
Y+GH D + +YI SGS D W++ +G + ML G +VIS
Sbjct: 430 YIGH----KDFVLSVCCTPDNEYILSGSKDRGVIFWDQASGNPLLMLQGHR-NSVIS 481
>UNIPROTKB|P0CY34 [details] [associations]
symbol:TUP1 "Transcriptional repressor TUP1" species:237561
"Candida albicans SC5314" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0009267 "cellular response to starvation" evidence=IMP]
[GO:0009372 "quorum sensing" evidence=IMP] [GO:0009405
"pathogenesis" evidence=IMP] [GO:0016337 "cell-cell adhesion"
evidence=IMP] [GO:0030447 "filamentous growth" evidence=IMP]
[GO:0035690 "cellular response to drug" evidence=IMP] [GO:0036166
"phenotypic switching" evidence=IMP] [GO:0036170 "filamentous
growth of a population of unicellular organisms in response to
starvation" evidence=IMP] [GO:0036171 "filamentous growth of a
population of unicellular organisms in response to chemical
stimulus" evidence=IMP] [GO:0036180 "filamentous growth of a
population of unicellular organisms in response to biotic stimulus"
evidence=IMP] [GO:0044114 "development of symbiont in host"
evidence=IMP] [GO:0044182 "filamentous growth of a population of
unicellular organisms" evidence=IMP] [GO:0044409 "entry into host"
evidence=IMP] [GO:0045827 "negative regulation of isoprenoid
metabolic process" evidence=IMP] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IGI;IMP] [GO:0051834
"evasion or tolerance of defenses of other organism involved in
symbiotic interaction" evidence=IMP] [GO:0071216 "cellular response
to biotic stimulus" evidence=IMP] [GO:0071280 "cellular response to
copper ion" evidence=IMP] [GO:0097308 "cellular response to
farnesol" evidence=IMP] [GO:1900429 "negative regulation of
filamentous growth of a population of unicellular organisms"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0005939 InterPro:IPR001632 GO:GO:0071216
GO:GO:0036180 GO:GO:0009405 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0000122 GO:GO:0071280
GO:GO:0035690 GO:GO:0009267 GO:GO:0016337 GO:GO:0009372
EMBL:AACQ01000036 EMBL:AACQ01000035 GO:GO:0036170 GO:GO:0044409
PRINTS:PR00319 GO:GO:0036171 GO:GO:1900429 GO:GO:0044114
GO:GO:0036166 GO:GO:0051834 GO:GO:0097308 KO:K06666
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558 RefSeq:XP_718964.1
RefSeq:XP_719068.1 COMPLUYEAST-2DPAGE:P56093 GeneID:3639369
GeneID:3639474 KEGG:cal:CaO19.13528 KEGG:cal:CaO19.6109
GO:GO:0045827 Uniprot:P0CY34
Length = 512
Score = 118 (46.6 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 23/72 (31%), Positives = 45/72 (62%)
Query: 53 VNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPETSDELVVS 112
+ ++ ++ G LL +G++D I +W S+++++ I GH +++ F P+ D LV S
Sbjct: 258 IRSVCFSPDGKLLATGAEDKLIRIWDLSTKRII-KILRGHEQDIYSLDFFPD-GDRLV-S 314
Query: 113 GAGDAEVRLFNL 124
G+GD VR+++L
Sbjct: 315 GSGDRSVRIWDL 326
Score = 61 (26.5 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 15/35 (42%), Positives = 21/35 (60%)
Query: 639 GDYIASGSDDGRWFIWEKQTGRLIKML-LGDEAGN 672
G IA+GS D +W+ TG L++ L G+E GN
Sbjct: 350 GKLIAAGSLDRTVRVWDSTTGFLVERLDSGNENGN 384
Score = 58 (25.5 bits), Expect = 6.0e-05, Sum P(2) = 6.0e-05
Identities = 18/57 (31%), Positives = 26/57 (45%)
Query: 619 YVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAGNVIS 675
Y+GH D + +YI SGS D W++ +G + ML G +VIS
Sbjct: 430 YIGH----KDFVLSVCCTPDNEYILSGSKDRGVIFWDQASGNPLLMLQGHR-NSVIS 481
>DICTYBASE|DDB_G0288453 [details] [associations]
symbol:DDB_G0288453 "E3 ubiquitin-protein ligase
RFWD2" species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50089 PROSITE:PS50294 SMART:SM00184 SMART:SM00320
dictyBase:DDB_G0288453 Prosite:PS00518 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0046872
GO:GO:0008270 eggNOG:COG2319 EMBL:AAFI02000111 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 KO:K10143 RefSeq:XP_636746.1
ProteinModelPortal:Q54IY4 EnsemblProtists:DDB0219336 GeneID:8626624
KEGG:ddi:DDB_G0288453 InParanoid:Q54IY4 OMA:DINVVER Uniprot:Q54IY4
Length = 970
Score = 138 (53.6 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 41/153 (26%), Positives = 76/153 (49%)
Query: 46 LEGHQGCVNAISWN-SKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPE 104
LE H+ V ++ ++ + + L SGSDDT + +WS ++ + + +IE+ AN+ C KF P
Sbjct: 754 LEEHEKRVWSVDFSRTDPTQLASGSDDTRVKLWSTTTERAITTIES--KANICCVKFNP- 810
Query: 105 TSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVEVGNPHVVW 164
S L+ G+ D + ++L ++ P +++ H + V V+ N +
Sbjct: 811 CSSNLIAFGSADHHIHYYDLRQYKD---------PLLIFKGHRKAVSY--VKFMNKDEII 859
Query: 165 SASEDGTLRQHDFRQGSSCPPAGSSHQECRNIL 197
SAS D TL+ + Q + C + H +N +
Sbjct: 860 SASTDSTLKLWNVNQ-NDCVRTFTGHSNEKNFV 891
Score = 47 (21.6 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 15/61 (24%), Positives = 28/61 (45%)
Query: 614 DMKQRYVGHCNVGTDIKQASFLGQ--RGDYIASGSDDGRWFIWEKQTGR-LIKMLLGDEA 670
D + + GH N + +F+G GDYI GS++ + + K + ++ G +
Sbjct: 876 DCVRTFTGHSN------EKNFVGLTVNGDYICCGSENNGVYTYYKTLSKPIVTHRFGANS 929
Query: 671 G 671
G
Sbjct: 930 G 930
>UNIPROTKB|H3BPD8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
EMBL:AC018552 EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845
HGNC:HGNC:6217 Ensembl:ENST00000566726 Bgee:H3BPD8 Uniprot:H3BPD8
Length = 208
Score = 124 (48.7 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 39/137 (28%), Positives = 66/137 (48%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPET 105
L GH V ++ N+ L+++GS I VW + K+L ++ GH AN+ F P
Sbjct: 63 LTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTL-MGHKANICSLDFHPY- 120
Query: 106 SDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVEVGNPHVVW- 164
E V SG+ D ++L+++ R +G Y+ H++ V+ L +P W
Sbjct: 121 -GEFVASGSQDTNIKLWDIRR---KGCVFR-------YRGHSQAVRCLRF---SPDGKWL 166
Query: 165 -SASEDGTLRQHDFRQG 180
SA++D T++ D G
Sbjct: 167 ASAADDHTVKLWDLTAG 183
Score = 108 (43.1 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 24/81 (29%), Positives = 46/81 (56%)
Query: 45 ELEGHQGCVNA-ISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVP 103
E+ H V++ + + G LL +G DD +N+WS + + S+ TGH++ V +
Sbjct: 19 EIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSL-TGHTSPVESVRL-- 75
Query: 104 ETSDELVVSGAGDAEVRLFNL 124
T +EL+V+G+ +R+++L
Sbjct: 76 NTPEELIVAGSQSGSIRVWDL 96
Score = 48 (22.0 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 13/50 (26%), Positives = 23/50 (46%)
Query: 618 RYVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLG 667
RY GH ++ F G ++AS +DD +W+ G+++ G
Sbjct: 146 RYRGHSQA---VRCLRF-SPDGKWLASAADDHTVKLWDLTAGKMMSEFPG 191
Score = 45 (20.9 bits), Expect = 0.00048, Sum P(2) = 0.00048
Identities = 7/17 (41%), Positives = 12/17 (70%)
Query: 639 GDYIASGSDDGRWFIWE 655
G+++ASGS D +W+
Sbjct: 121 GEFVASGSQDTNIKLWD 137
>UNIPROTKB|Q0VCN2 [details] [associations]
symbol:MORG1 "Mitogen-activated protein kinase organizer 1"
species:9913 "Bos taurus" [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0000375 "RNA splicing, via
transesterification reactions" evidence=IEA] [GO:0016301 "kinase
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016301 GO:GO:0071013 GO:GO:0000375
GeneTree:ENSGT00700000104496 HOGENOM:HOG000091642 CTD:84292
HOVERGEN:HBG105288 KO:K13124 OrthoDB:EOG4ZCT4V OMA:CKQGAVR
EMBL:DAAA02019387 EMBL:DAAA02019388 EMBL:BC120088 IPI:IPI00687810
RefSeq:NP_001073118.1 UniGene:Bt.64656 Ensembl:ENSBTAT00000008196
GeneID:780845 KEGG:bta:780845 InParanoid:Q0VCN2 NextBio:20924512
Uniprot:Q0VCN2
Length = 315
Score = 107 (42.7 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 26/81 (32%), Positives = 44/81 (54%)
Query: 44 RELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVP 103
R+ GH G VN + +N + ++++SGS D+ I W SRK ++T A +
Sbjct: 103 RKFRGHAGKVNTVQFNEEATVILSGSIDSTIRCWDCRSRKP-EPVQTLDEARDGISSV-- 159
Query: 104 ETSDELVVSGAGDAEVRLFNL 124
+ SD V++G+ D VR ++L
Sbjct: 160 KVSDHEVLAGSVDGRVRRYDL 180
Score = 66 (28.3 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 15/43 (34%), Positives = 22/43 (51%)
Query: 619 YVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRL 661
Y GH N + K L +R ++ S S+DG+ F W+ G L
Sbjct: 229 YTGHKN--KEYKLDCCLSERDTHVVSCSEDGKVFFWDLVEGAL 269
>UNIPROTKB|H3BT67 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0051013 EMBL:AC018552
EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845 HGNC:HGNC:6217
Ensembl:ENST00000569627 Bgee:H3BT67 Uniprot:H3BT67
Length = 117
Score = 109 (43.4 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 24/82 (29%), Positives = 47/82 (57%)
Query: 44 RELEGHQGCVNA-ISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFV 102
+E+ H V++ + + G LL +G DD +N+WS + + S+ TGH++ V +
Sbjct: 14 QEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSL-TGHTSPVESVRL- 71
Query: 103 PETSDELVVSGAGDAEVRLFNL 124
T +EL+V+G+ +R+++L
Sbjct: 72 -NTPEELIVAGSQSGSIRVWDL 92
>UNIPROTKB|H3BPK1 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0010942 "positive
regulation of cell death" evidence=IEA] [GO:0010976 "positive
regulation of neuron projection development" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth cone"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005813 GO:GO:0010976 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0051013 EMBL:AC018552
EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845 HGNC:HGNC:6217
Ensembl:ENST00000562592 Bgee:H3BPK1 Uniprot:H3BPK1
Length = 210
Score = 124 (48.7 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 39/137 (28%), Positives = 66/137 (48%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPET 105
L GH V ++ N+ L+++GS I VW + K+L ++ GH AN+ F P
Sbjct: 59 LTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTL-MGHKANICSLDFHPY- 116
Query: 106 SDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVEVGNPHVVW- 164
E V SG+ D ++L+++ R +G Y+ H++ V+ L +P W
Sbjct: 117 -GEFVASGSQDTNIKLWDIRR---KGCVFR-------YRGHSQAVRCLRF---SPDGKWL 162
Query: 165 -SASEDGTLRQHDFRQG 180
SA++D T++ D G
Sbjct: 163 ASAADDHTVKLWDLTAG 179
Score = 109 (43.4 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 24/82 (29%), Positives = 47/82 (57%)
Query: 44 RELEGHQGCVNA-ISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFV 102
+E+ H V++ + + G LL +G DD +N+WS + + S+ TGH++ V +
Sbjct: 14 QEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSL-TGHTSPVESVRL- 71
Query: 103 PETSDELVVSGAGDAEVRLFNL 124
T +EL+V+G+ +R+++L
Sbjct: 72 -NTPEELIVAGSQSGSIRVWDL 92
Score = 48 (22.0 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 13/50 (26%), Positives = 23/50 (46%)
Query: 618 RYVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLG 667
RY GH ++ F G ++AS +DD +W+ G+++ G
Sbjct: 142 RYRGHSQA---VRCLRF-SPDGKWLASAADDHTVKLWDLTAGKMMSEFPG 187
Score = 45 (20.9 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 7/17 (41%), Positives = 12/17 (70%)
Query: 639 GDYIASGSDDGRWFIWE 655
G+++ASGS D +W+
Sbjct: 117 GEFVASGSQDTNIKLWD 133
>POMBASE|SPAC29E6.01 [details] [associations]
symbol:pof11 "F-box protein Pof11" species:4896
"Schizosaccharomyces pombe" [GO:0000151 "ubiquitin ligase complex"
evidence=ISM] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005829 "cytosol" evidence=IDA] [GO:0016567 "protein
ubiquitination" evidence=ISM] [GO:0030674 "protein binding,
bridging" evidence=ISM] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
PomBase:SPAC29E6.01 GO:GO:0005829 GO:GO:0007126 EMBL:CU329670
GenomeReviews:CU329670_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030674 SUPFAM:SSF81383
GO:GO:0016567 GO:GO:0000151 KO:K03362 EMBL:Z66525 EMBL:AB061694
PIR:T38502 PIR:T50211 RefSeq:NP_594559.1 ProteinModelPortal:Q09855
IntAct:Q09855 EnsemblFungi:SPAC29E6.01.1 GeneID:2541707
KEGG:spo:SPAC29E6.01 OMA:CIEANDK OrthoDB:EOG4HQHSG NextBio:20802799
Uniprot:Q09855
Length = 506
Score = 109 (43.4 bits), Expect = 3.6e-05, Sum P(3) = 3.6e-05
Identities = 34/110 (30%), Positives = 58/110 (52%)
Query: 64 LLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPETSDELVVSGAGDAEVRLFN 123
+++SGS D ++VW +SR +L+ + GHS +V C F + L+VSG+ D+ + +++
Sbjct: 233 IMVSGSKDRTVSVWDVNSRFILYKLY-GHSGSVLCLDFCRRRN--LLVSGSSDSTIIIWD 289
Query: 124 LSRFSGRGLDDNAITPSALYQCHTRRVKKLAVEVGNPHVVWSASEDGTLR 173
+ R P +Y HT V L V V +++ S+S D T R
Sbjct: 290 ---WQNR-------RPLKVYFGHTDNV--LGVVVSENYII-SSSRDHTAR 326
Score = 106 (42.4 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 40/147 (27%), Positives = 65/147 (44%)
Query: 45 ELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPE 104
+L GH G V + + + +LL+SGS D+ I +W + +R+ L + GH+ NV
Sbjct: 256 KLYGHSGSVLCLDFCRRRNLLVSGSSDSTIIIWDWQNRRPL-KVYFGHTDNVLGVV---- 310
Query: 105 TSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVEVGNPHVVW 164
S+ ++S + D R++ L S A + + H V + +V
Sbjct: 311 VSENYIISSSRDHTARVWRLDATSP------AEACMHVLRGHLASVNSVQYSSKTGLIV- 363
Query: 165 SASEDGTLRQHDFRQGSSCPPAGSSHQ 191
+AS D TLR D G C +HQ
Sbjct: 364 TASSDRTLRTWDITTGH-CIRIIHAHQ 389
Score = 64 (27.6 bits), Expect = 3.6e-05, Sum P(3) = 3.6e-05
Identities = 14/31 (45%), Positives = 20/31 (64%)
Query: 639 GDYIASGSDDGRWFIWEKQTGRLIKMLLGDE 669
G +I SGS D I+E +G+L++ML G E
Sbjct: 399 GKFIVSGSSDLTIRIFEASSGKLLRMLQGHE 429
Score = 46 (21.3 bits), Expect = 3.6e-05, Sum P(3) = 3.6e-05
Identities = 8/14 (57%), Positives = 10/14 (71%)
Query: 385 EACNEVLEGHLSGI 398
EAC VL GHL+ +
Sbjct: 337 EACMHVLRGHLASV 350
>UNIPROTKB|I3L2U8 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0000226 "microtubule cytoskeleton organization" evidence=IEA]
[GO:0001667 "ameboidal cell migration" evidence=IEA] [GO:0001675
"acrosome assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0007097 "nuclear migration" evidence=IEA] [GO:0007268 "synaptic
transmission" evidence=IEA] [GO:0007405 "neuroblast proliferation"
evidence=IEA] [GO:0007611 "learning or memory" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0008090
"retrograde axon cargo transport" evidence=IEA] [GO:0008344 "adult
locomotory behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0010977 "negative regulation of neuron projection
development" evidence=IEA] [GO:0017145 "stem cell division"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031512 "motile primary cilium"
evidence=IEA] [GO:0031982 "vesicle" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0032403
"protein complex binding" evidence=IEA] [GO:0033267 "axon part"
evidence=IEA] [GO:0036035 "osteoclast development" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0045505 "dynein
intermediate chain binding" evidence=IEA] [GO:0045773 "positive
regulation of axon extension" evidence=IEA] [GO:0045931 "positive
regulation of mitotic cell cycle" evidence=IEA] [GO:0046329
"negative regulation of JNK cascade" evidence=IEA] [GO:0047496
"vesicle transport along microtubule" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0050885
"neuromuscular process controlling balance" evidence=IEA]
[GO:0051081 "nuclear envelope disassembly" evidence=IEA]
[GO:0051219 "phosphoprotein binding" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0021766 GO:GO:0001764 GO:GO:0033267 GO:GO:0005871
GO:GO:0031252 GO:GO:0000226 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0030426
GO:GO:0007611 GO:GO:0007405 GO:GO:0008090 GO:GO:0045773
GO:GO:0001675 GO:GO:0005874 GO:GO:0032319 GO:GO:0007097
GO:GO:0021819 GO:GO:0047496 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 GO:GO:0051081
HGNC:HGNC:8574 ChiTaRS:PAFAH1B1 GO:GO:0051660 EMBL:AC015799
EMBL:AC005696 ProteinModelPortal:I3L2U8 SMR:I3L2U8
Ensembl:ENST00000573839 Bgee:I3L2U8 Uniprot:I3L2U8
Length = 345
Score = 115 (45.5 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
Identities = 38/156 (24%), Positives = 72/156 (46%)
Query: 37 VRRLSQERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANV 96
+ R ++ L GH+ V + ++ S+++S S+D I VW Y + +++ GH+ +V
Sbjct: 30 IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLK-GHTDSV 88
Query: 97 FCTKFVPETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVE 156
F + S +L+ S + D ++L++ F I H V +A+
Sbjct: 89 QDISF--DHSGKLLASCSADMTIKLWDFQGFE-------CIRTM---HGHDHNVSSVAIM 136
Query: 157 VGNPHVVWSASEDGTLRQHDFRQGSSCPPAGSSHQE 192
H+V SAS D T++ + + G C + H+E
Sbjct: 137 PNGDHIV-SASRDKTIKMWEVQTGY-CVKTFTGHRE 170
Score = 58 (25.5 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
Identities = 13/44 (29%), Positives = 25/44 (56%)
Query: 626 GTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDE 669
G++ K++ G+ G ++ SGS D +W+ TG + L+G +
Sbjct: 233 GSETKKS---GKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHD 273
Score = 45 (20.9 bits), Expect = 0.00078, Sum P(2) = 0.00078
Identities = 11/40 (27%), Positives = 22/40 (55%)
Query: 639 GDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAGNVISSME 678
G +I S +DD +W+ + R +K L E + ++S++
Sbjct: 285 GKFILSCADDKTLRVWDYKNKRCMKTLNAHE--HFVTSLD 322
>SGD|S000000680 [details] [associations]
symbol:TUP1 "General repressor of transcription" species:4932
"Saccharomyces cerevisiae" [GO:0001191 "RNA polymerase II
transcription factor binding transcription factor activity involved
in negative regulation of transcription" evidence=IMP;IDA;IPI]
[GO:0017053 "transcriptional repressor complex" evidence=IDA]
[GO:0001198 "negative regulation of mating-type specific
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0000433 "negative regulation of transcription from RNA
polymerase II promoter by glucose" evidence=IMP] [GO:2000531
"regulation of fatty acid biosynthetic process by regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0043130 "ubiquitin binding" evidence=IDA] [GO:0036033 "mediator
complex binding" evidence=IDA;IPI] [GO:0042826 "histone deacetylase
binding" evidence=IDA;IPI] [GO:0043486 "histone exchange"
evidence=IMP] [GO:0061418 "regulation of transcription from RNA
polymerase II promoter in response to hypoxia" evidence=IMP]
[GO:0061392 "regulation of transcription from RNA polymerase II
promoter in response to osmotic stress" evidence=IMP] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IMP] [GO:0042393 "histone
binding" evidence=IDA;IPI] [GO:0080025
"phosphatidylinositol-3,5-bisphosphate binding" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA;IDA;IPI] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0035955 "negative regulation of dipeptide transport by negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:2001020 "regulation of response to DNA damage
stimulus" evidence=IMP] [GO:0016584 "nucleosome positioning"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SGD:S000000680 GO:GO:0017053 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:X59720 EMBL:BK006937
GO:GO:2001020 GO:GO:0043486 GO:GO:0042393 GO:GO:0042826
GO:GO:0061418 GO:GO:0016584 GO:GO:0043130 GO:GO:0080025
GO:GO:0001191 GO:GO:0035955 GO:GO:0000433 GO:GO:0007070
GO:GO:2000531 GO:GO:0061392 GeneTree:ENSGT00700000104507
GO:GO:0001198 GO:GO:0036033 HOGENOM:HOG000200558 KO:K06666
OrthoDB:EOG4KM2C2 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
EMBL:M31733 EMBL:M35861 EMBL:X16365 PIR:JN0133 RefSeq:NP_010007.1
PDB:1ERJ PDB:3VP8 PDB:3VP9 PDBsum:1ERJ PDBsum:3VP8 PDBsum:3VP9
ProteinModelPortal:P16649 SMR:P16649 DIP:DIP-512N IntAct:P16649
MINT:MINT-648551 STRING:P16649 PaxDb:P16649 PeptideAtlas:P16649
EnsemblFungi:YCR084C GeneID:850445 KEGG:sce:YCR084C CYGD:YCR084c
OMA:TISESCI EvolutionaryTrace:P16649 NextBio:966057
Genevestigator:P16649 GermOnline:YCR084C Uniprot:P16649
Length = 713
Score = 111 (44.1 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
Identities = 21/72 (29%), Positives = 45/72 (62%)
Query: 53 VNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPETSDELVVS 112
+ ++ ++ G L +G++D I +W +RK++ ++ GH +++ + P + D+LV S
Sbjct: 446 IRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQ-GHEQDIYSLDYFP-SGDKLV-S 502
Query: 113 GAGDAEVRLFNL 124
G+GD VR+++L
Sbjct: 503 GSGDRTVRIWDL 514
Score = 71 (30.1 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
Identities = 20/57 (35%), Positives = 28/57 (49%)
Query: 619 YVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAGNVIS 675
Y+GH D + Q +YI SGS D W+K++G + ML G +VIS
Sbjct: 626 YIGH----KDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHR-NSVIS 677
Score = 62 (26.9 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 14/34 (41%), Positives = 22/34 (64%)
Query: 639 GDYIASGSDDGRWFIWEKQTGRLIKMLLGD-EAG 671
G YIA+GS D +W+ +TG L++ L + E+G
Sbjct: 539 GKYIAAGSLDRAVRVWDSETGFLVERLDSENESG 572
>ASPGD|ASPL0000017294 [details] [associations]
symbol:AN3926 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0051568 "histone H3-K4 methylation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001302 EMBL:AACD01000064 KO:K14963 OrthoDB:EOG49CTJ0
RefSeq:XP_661530.1 ProteinModelPortal:Q5B6A4
EnsemblFungi:CADANIAT00004769 GeneID:2873346 KEGG:ani:AN3926.2
HOGENOM:HOG000215221 OMA:VHEDNPP Uniprot:Q5B6A4
Length = 522
Score = 116 (45.9 bits), Expect = 4.0e-05, Sum P(2) = 4.0e-05
Identities = 25/79 (31%), Positives = 46/79 (58%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPET 105
L GH V+A+ ++ S++ SG D + VW+ S+ KL+++ E GH A + + P+
Sbjct: 172 LRGHLRGVSAVRFSPDASMIASGGADGAVKVWAASTGKLIYTFE-GHLAGISTISWSPDG 230
Query: 106 SDELVVSGAGDAEVRLFNL 124
+ + SG+ D +RL+N+
Sbjct: 231 AT--IASGSDDKTIRLWNV 247
Score = 113 (44.8 bits), Expect = 0.00018, Sum P(3) = 0.00018
Identities = 26/78 (33%), Positives = 44/78 (56%)
Query: 47 EGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPETS 106
EGH ++ ISW+ G+ + SGSDD I +W+ + K + GH V+ F P+ +
Sbjct: 215 EGHLAGISTISWSPDGATIASGSDDKTIRLWNVLTGKAHPTPFIGHHNYVYAIAFSPKGN 274
Query: 107 DELVVSGAGDAEVRLFNL 124
++VSG+ D V L+++
Sbjct: 275 --MLVSGSYDEAVFLWDV 290
Score = 62 (26.9 bits), Expect = 4.0e-05, Sum P(2) = 4.0e-05
Identities = 14/47 (29%), Positives = 27/47 (57%)
Query: 619 YVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKML 665
++GH N + +F +G+ + SGS D F+W+ ++ R++K L
Sbjct: 257 FIGHHNY---VYAIAF-SPKGNMLVSGSYDEAVFLWDVRSARVMKSL 299
Score = 54 (24.1 bits), Expect = 7.0e-05, Sum P(3) = 7.0e-05
Identities = 11/31 (35%), Positives = 19/31 (61%)
Query: 639 GDYIASGSDDGRWFIWEKQTGRLIKMLLGDE 669
G IAS + DG IW+ TG+ ++ L+ ++
Sbjct: 315 GTLIASCATDGLVRIWDTSTGQCLRTLVHED 345
Score = 52 (23.4 bits), Expect = 8.7e-05, Sum P(3) = 8.7e-05
Identities = 16/49 (32%), Positives = 26/49 (53%)
Query: 282 LTHVTFSPNGEEVLLSYSGEHVYLMDVNHAGGRAMRYTVGDASKIMSFT 330
++ V FSPNG+ VL + V L D + GR ++ G ++K S +
Sbjct: 349 VSSVKFSPNGKYVLAWTLDDCVRLWD--YVEGRCLKTYQGHSNKKYSLS 395
Score = 47 (21.6 bits), Expect = 8.7e-05, Sum P(3) = 8.7e-05
Identities = 9/40 (22%), Positives = 21/40 (52%)
Query: 641 YIASGSDDGRWFIWEKQTGRLIKMLLGDEAGNVISSMEEC 680
+ SGS+DG W+ T ++++ + + V+ ++ C
Sbjct: 414 FAVSGSEDGAILCWDVVTKKVLQRIEAHDG--VVLGVDTC 451
Score = 46 (21.3 bits), Expect = 7.0e-05, Sum P(3) = 7.0e-05
Identities = 12/33 (36%), Positives = 17/33 (51%)
Query: 285 VTFSPNGEEVLLSYSGEHVYLMDVNHAGGRAMR 317
+ FSP G ++ E V+L DV A R M+
Sbjct: 267 IAFSPKGNMLVSGSYDEAVFLWDVRSA--RVMK 297
>TAIR|locus:2082891 [details] [associations]
symbol:RID3 "AT3G49180" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002686 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:AL132956 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0080008 UniGene:At.46259 UniGene:At.48755
UniGene:At.72728 EMBL:BT004624 EMBL:AK227986 IPI:IPI00544514
PIR:T45823 RefSeq:NP_190487.1 ProteinModelPortal:Q9M3B4 SMR:Q9M3B4
IntAct:Q9M3B4 STRING:Q9M3B4 PRIDE:Q9M3B4 DNASU:824079
EnsemblPlants:AT3G49180.1 GeneID:824079 KEGG:ath:AT3G49180
TAIR:At3g49180 InParanoid:Q9M3B4 OMA:SEDRTCK PhylomeDB:Q9M3B4
ProtClustDB:CLSN2684231 Genevestigator:Q9M3B4 Uniprot:Q9M3B4
Length = 438
Score = 123 (48.4 bits), Expect = 4.4e-05, Sum P(2) = 4.4e-05
Identities = 39/134 (29%), Positives = 67/134 (50%)
Query: 53 VNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPETSDELVVS 112
+ A++ N++G+ L+ G I +W ++ KLL GH +V C F + D L+VS
Sbjct: 81 IKALAANNEGTYLVGGGISGDIYLWEVATGKLLKKWH-GHYRSVTCLVFSGD--DSLLVS 137
Query: 113 GAGDAEVRLFNLSRFSGRGLDD-NAITPSALYQC----HTRRVKKLAVEVGNPH-VVWSA 166
G+ D +R+++L R DD + LY+ HT V + ++ G + V+ S+
Sbjct: 138 GSQDGSIRVWSLIRL----FDDFQRQQGNTLYEHNFNEHTMSVTDIVIDYGGCNAVIISS 193
Query: 167 SEDGTLRQHDFRQG 180
SED T + +G
Sbjct: 194 SEDRTCKVWSLSRG 207
Score = 52 (23.4 bits), Expect = 4.4e-05, Sum P(2) = 4.4e-05
Identities = 9/28 (32%), Positives = 19/28 (67%)
Query: 639 GDYIASGSDDGRWFIWEKQTGRLIKMLL 666
G+ + SGS+DG +W+ ++ R ++ L+
Sbjct: 275 GNLLISGSEDGVVCVWDPKSLRHVRTLI 302
>UNIPROTKB|H0YCT5 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9606
"Homo sapiens" [GO:0016581 "NuRD complex" evidence=IEA] [GO:0035098
"ESC/E(Z) complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016581 EMBL:AC114489 HGNC:HGNC:9887
ChiTaRS:RBBP4 PRIDE:H0YCT5 Ensembl:ENST00000460669 Bgee:H0YCT5
Uniprot:H0YCT5
Length = 180
Score = 119 (46.9 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 36/134 (26%), Positives = 63/134 (47%)
Query: 46 LEGHQGCVNAISWNSKGS-LLISGSDDTHINVWSYSSRKL-LHSIETGHSANVFCTKFVP 103
++ H VN +S+N +L +GS D + +W + KL LHS E+ H +F ++ P
Sbjct: 24 VDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFES-HKDEIFQVQWSP 82
Query: 104 ETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAIT--PSALY--QCHTRRVKKLAVEVGN 159
L SG D + +++LS+ ++A P L+ HT ++ +
Sbjct: 83 HNETILASSGT-DRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNE 141
Query: 160 PHVVWSASEDGTLR 173
P V+ S SED ++
Sbjct: 142 PWVICSVSEDNIMQ 155
>UNIPROTKB|E2RRL3 [details] [associations]
symbol:WDR83 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0000375 "RNA splicing, via transesterification
reactions" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
GO:GO:0000375 GeneTree:ENSGT00700000104496 CTD:84292 KO:K13124
OMA:CKQGAVR EMBL:AAEX03012407 RefSeq:XP_542047.1
ProteinModelPortal:E2RRL3 Ensembl:ENSCAFT00000027316 GeneID:484931
KEGG:cfa:484931 NextBio:20858998 Uniprot:E2RRL3
Length = 315
Score = 108 (43.1 bits), Expect = 4.9e-05, Sum P(2) = 4.9e-05
Identities = 26/81 (32%), Positives = 44/81 (54%)
Query: 44 RELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVP 103
R+ GH G VN + +N + ++++SGS D+ I W SR+ ++T A +
Sbjct: 103 RKFRGHAGKVNTVQFNEEATVILSGSIDSSIRCWDCRSRRP-EPVQTLDEARDGISSV-- 159
Query: 104 ETSDELVVSGAGDAEVRLFNL 124
+ SD V+SG+ D VR ++L
Sbjct: 160 KVSDHEVLSGSVDGRVRRYDL 180
Score = 71 (30.1 bits), Expect = 0.00086, Sum P(3) = 0.00086
Identities = 27/89 (30%), Positives = 45/89 (50%)
Query: 40 LSQER--ELEGHQGCVNAISWNSKGSLLIS-GSDDTHINVWSYSSRKLLHSIETGHSANV 96
L Q+R L+ QG V A+ +N G+ ++ GSD T + +W+ LL + +GH V
Sbjct: 13 LPQKRVKTLDCGQGAVRAVRFNVDGNYCLTCGSDKT-LKLWNPLRGTLLRTY-SGHGYEV 70
Query: 97 FCTKFVPETSDELVVSGAGDAEVRLFNLS 125
+ S + SG GD V L++++
Sbjct: 71 LDAAGSFDNSS--LCSGGGDKAVVLWDVA 97
Score = 66 (28.3 bits), Expect = 0.00086, Sum P(3) = 0.00086
Identities = 29/93 (31%), Positives = 40/93 (43%)
Query: 162 VVWSASEDGTLRQHDFRQGSSCPPAGSSHQECRNIL---LD--LRCGAKRSLADPPKQTL 216
V+W + +R+ FR + ++E IL +D +RC RS P QTL
Sbjct: 92 VLWDVASGQVVRK--FRGHAGKVNTVQFNEEATVILSGSIDSSIRCWDCRSRRPEPVQTL 149
Query: 217 SLKSCDISSTR--PHLLLVGGSDAFARLYDRRM 247
ISS + H +L G D R YD RM
Sbjct: 150 DEARDGISSVKVSDHEVLSGSVDGRVRRYDLRM 182
Score = 63 (27.2 bits), Expect = 4.9e-05, Sum P(2) = 4.9e-05
Identities = 14/43 (32%), Positives = 22/43 (51%)
Query: 619 YVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRL 661
Y GH N + K L +R ++ S S+DG+ + W+ G L
Sbjct: 229 YTGHKN--QEYKLDCCLSERDTHVVSCSEDGKVYFWDLVEGAL 269
>WB|WBGene00020423 [details] [associations]
symbol:prp-19 species:6239 "Caenorhabditis elegans"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0016567
"protein ubiquitination" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0002009 "morphogenesis of an epithelium" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040035 "hermaphrodite
genitalia development" evidence=IMP] [GO:0040002 "collagen and
cuticulin-based cuticle development" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003613
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00504 GO:GO:0009792
GO:GO:0002009 GO:GO:0006898 GO:GO:0040007 GO:GO:0005654
GO:GO:0002119 GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0003677 GO:GO:0006281
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397
GO:GO:0040011 GO:GO:0005681 GO:GO:0040035 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0040002 GO:GO:0000151
GeneTree:ENSGT00700000104487 InterPro:IPR013915 Pfam:PF08606
HOGENOM:HOG000177308 OMA:QWQELKV EMBL:FO081619 PIR:T16846
ProteinModelPortal:Q10051 SMR:Q10051 DIP:DIP-26296N IntAct:Q10051
MINT:MINT-214042 STRING:Q10051 PaxDb:Q10051
EnsemblMetazoa:T10F2.4.1 EnsemblMetazoa:T10F2.4.2 UCSC:T10F2.4.1
WormBase:T10F2.4 InParanoid:Q10051 NextBio:889292 Uniprot:Q10051
Length = 492
Score = 130 (50.8 bits), Expect = 5.6e-05, P = 5.6e-05
Identities = 63/239 (26%), Positives = 106/239 (44%)
Query: 1 MENFPFHDGSIYDMLDTRHTDTRPDVNHSLQMHSSL--VRRLSQERELEGHQGCVNAISW 58
M+ F H+ I ++ H D ++ S H + S + ++ HQ V IS
Sbjct: 244 MQTFKGHNKKINAVV--LHPDNITAISASADSHIRVWSATDSSSKAIIDVHQAPVTDISL 301
Query: 59 NSKGSLLISGSDDTHINVWSYS---SRKLLH--SIETGHSANVFCTKFVPETSDELVV-S 112
N+ G ++S SDD++ W++S S K L S+E G V +F P D L+ +
Sbjct: 302 NASGDYILSASDDSY---WAFSDIRSGKSLCKVSVEPGSQIAVHSIEFHP---DGLIFGT 355
Query: 113 GAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVEVGNPHVVWSASEDGTL 172
GA DA V++++L N T +A + HT V+ +A N + + + SEDG +
Sbjct: 356 GAADAVVKIWDLK---------NQ-TVAAAFPGHTAAVRSIAFSE-NGYYLATGSEDGEV 404
Query: 173 RQHDFRQGSSCPP-AGSSHQECRNILLDLRCGAKRSLADPPKQTLSLKS-CDISSTRPH 229
+ D R+ + A Q ++ D+ G + Q L +KS ++ S H
Sbjct: 405 KLWDLRKLKNLKTFANEEKQPINSLSFDMT-GTFLGIGGQKVQVLHVKSWSEVVSLSDH 462
>UNIPROTKB|A4RJV3 [details] [associations]
symbol:MDV1 "Mitochondrial division protein 1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0000002
"mitochondrial genome maintenance" evidence=ISS] [GO:0000266
"mitochondrial fission" evidence=ISS] [GO:0005739 "mitochondrion"
evidence=ISS] [GO:0005741 "mitochondrial outer membrane"
evidence=ISS] [GO:0006352 "DNA-dependent transcription, initiation"
evidence=ISS] [GO:0006354 "DNA-dependent transcription, elongation"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0006402 "mRNA catabolic process"
evidence=ISS] [GO:0030014 "CCR4-NOT complex" evidence=ISS]
[GO:0030015 "CCR4-NOT core complex" evidence=ISS] [GO:0051020
"GTPase binding" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005741
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006352
GO:GO:0000002 GO:GO:0006402 EMBL:CM001232 GO:GO:0030015
OrthoDB:EOG469V30 GO:GO:0000266 GO:GO:0006354 GO:GO:0051020
RefSeq:XP_003714706.1 ProteinModelPortal:A4RJV3 STRING:A4RJV3
GeneID:2679351 KEGG:mgr:MGG_01711 Uniprot:A4RJV3
Length = 661
Score = 130 (50.8 bits), Expect = 6.4e-05, Sum P(2) = 6.4e-05
Identities = 27/83 (32%), Positives = 50/83 (60%)
Query: 44 RELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVP 103
REL HQ C+ A+ +++ L+S + D + VW ++ + + S+E GH+A+V
Sbjct: 313 RELRAHQDCITAMDFDAPFGTLVSAAMDDSVKVWDLNAGRCIGSLE-GHTASVRAL---- 367
Query: 104 ETSDELVVSGAGDAEVRLFNLSR 126
+ D ++ +G+ DA VRL++LS+
Sbjct: 368 QVEDNILATGSRDATVRLWDLSK 390
Score = 48 (22.0 bits), Expect = 6.4e-05, Sum P(2) = 6.4e-05
Identities = 11/41 (26%), Positives = 21/41 (51%)
Query: 625 VGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKML 665
+ + + + + L +GD + SGS D W+ GR ++ L
Sbjct: 435 LSSHMDEVTALHFKGDTLVSGSSDKTIRQWDLVKGRCVQTL 475
Score = 47 (21.6 bits), Expect = 8.2e-05, Sum P(2) = 8.2e-05
Identities = 13/41 (31%), Positives = 25/41 (60%)
Query: 630 KQASFLG--QRGDY-IASGSDDGRWFIWEKQTGRLIKMLLG 667
+ A F+G Q D +A G+ DG +W+ ++G++ + L+G
Sbjct: 504 EDADFVGAVQVFDAALACGTADGMVRLWDLRSGQVHRNLVG 544
Score = 39 (18.8 bits), Expect = 0.00053, Sum P(2) = 0.00053
Identities = 7/21 (33%), Positives = 13/21 (61%)
Query: 641 YIASGSDDGRWFIWEKQTGRL 661
++ +GS D IW+ +TG +
Sbjct: 558 HLVTGSHDRSIRIWDLRTGSI 578
>UNIPROTKB|A5D7P3 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOVERGEN:HBG006271
OMA:WVRGLAF InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 IPI:IPI00703460 UniGene:Bt.111460 GO:GO:0051081
EMBL:DAAA02048674 EMBL:DAAA02048675 EMBL:DAAA02048676 EMBL:BC140633
SMR:A5D7P3 STRING:A5D7P3 Ensembl:ENSBTAT00000055329 Uniprot:A5D7P3
Length = 410
Score = 115 (45.5 bits), Expect = 6.6e-05, Sum P(2) = 6.6e-05
Identities = 38/156 (24%), Positives = 72/156 (46%)
Query: 37 VRRLSQERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANV 96
+ R ++ L GH+ V + ++ S+++S S+D I VW Y + +++ GH+ +V
Sbjct: 95 IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLK-GHTDSV 153
Query: 97 FCTKFVPETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVE 156
F + S +L+ S + D ++L++ F I H V +A+
Sbjct: 154 QDISF--DHSGKLLASCSADMTIKLWDFQGFE-------CIRTM---HGHDHNVSSVAIM 201
Query: 157 VGNPHVVWSASEDGTLRQHDFRQGSSCPPAGSSHQE 192
H+V SAS D T++ + + G C + H+E
Sbjct: 202 PNGDHIV-SASRDKTIKMWEVQTGY-CVKTFTGHRE 235
Score = 58 (25.5 bits), Expect = 6.6e-05, Sum P(2) = 6.6e-05
Identities = 13/44 (29%), Positives = 25/44 (56%)
Query: 626 GTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDE 669
G++ K++ G+ G ++ SGS D +W+ TG + L+G +
Sbjct: 298 GSETKKS---GKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHD 338
>UNIPROTKB|P43033 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0045502 "dynein
binding" evidence=IDA] [GO:0034452 "dynactin binding" evidence=IDA]
[GO:0046469 "platelet activating factor metabolic process"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0043274
"phospholipase binding" evidence=IDA] [GO:0008201 "heparin binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008017 "microtubule binding" evidence=IDA] [GO:0031965
"nuclear membrane" evidence=IEA] [GO:0005819 "spindle"
evidence=IEA] [GO:0005815 "microtubule organizing center"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0007399 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819
InterPro:IPR019775 GO:GO:0016042 GO:GO:0006810 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008201
GO:GO:0005815 InterPro:IPR013720 Pfam:PF08513 GO:GO:0008017
GO:GO:0005874 GO:GO:0034452 GO:GO:0045502 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:D30615 IPI:IPI00703460 RefSeq:NP_777088.1 UniGene:Bt.111460
ProteinModelPortal:P43033 SMR:P43033 IntAct:P43033 STRING:P43033
PRIDE:P43033 GeneID:282513 KEGG:bta:282513 CTD:5048
NextBio:20806263 GO:GO:0043274 GO:GO:0046469 Uniprot:P43033
Length = 410
Score = 115 (45.5 bits), Expect = 6.6e-05, Sum P(2) = 6.6e-05
Identities = 38/156 (24%), Positives = 72/156 (46%)
Query: 37 VRRLSQERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANV 96
+ R ++ L GH+ V + ++ S+++S S+D I VW Y + +++ GH+ +V
Sbjct: 95 IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLK-GHTDSV 153
Query: 97 FCTKFVPETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVE 156
F + S +L+ S + D ++L++ F I H V +A+
Sbjct: 154 EDISF--DHSGKLLASCSADMTIKLWDFQGFE-------CIRTM---HGHDHNVSSVAIM 201
Query: 157 VGNPHVVWSASEDGTLRQHDFRQGSSCPPAGSSHQE 192
H+V SAS D T++ + + G C + H+E
Sbjct: 202 PNGDHIV-SASRDKTIKMWEVQTGY-CVKTFTGHRE 235
Score = 58 (25.5 bits), Expect = 6.6e-05, Sum P(2) = 6.6e-05
Identities = 13/44 (29%), Positives = 25/44 (56%)
Query: 626 GTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDE 669
G++ K++ G+ G ++ SGS D +W+ TG + L+G +
Sbjct: 298 GSETKKS---GKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHD 338
>UNIPROTKB|E2QY31 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
CTD:5048 EMBL:AAEX03006704 RefSeq:XP_854482.1
ProteinModelPortal:E2QY31 SMR:E2QY31 PRIDE:E2QY31
Ensembl:ENSCAFT00000030661 GeneID:480656 KEGG:cfa:480656
NextBio:20855646 Uniprot:E2QY31
Length = 410
Score = 115 (45.5 bits), Expect = 6.6e-05, Sum P(2) = 6.6e-05
Identities = 38/156 (24%), Positives = 72/156 (46%)
Query: 37 VRRLSQERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANV 96
+ R ++ L GH+ V + ++ S+++S S+D I VW Y + +++ GH+ +V
Sbjct: 95 IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLK-GHTDSV 153
Query: 97 FCTKFVPETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVE 156
F + S +L+ S + D ++L++ F I H V +A+
Sbjct: 154 QDISF--DHSGKLLASCSADMTIKLWDFQGFE-------CIRTM---HGHDHNVSSVAIM 201
Query: 157 VGNPHVVWSASEDGTLRQHDFRQGSSCPPAGSSHQE 192
H+V SAS D T++ + + G C + H+E
Sbjct: 202 PNGDHIV-SASRDKTIKMWEVQTGY-CVKTFTGHRE 235
Score = 58 (25.5 bits), Expect = 6.6e-05, Sum P(2) = 6.6e-05
Identities = 13/44 (29%), Positives = 25/44 (56%)
Query: 626 GTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDE 669
G++ K++ G+ G ++ SGS D +W+ TG + L+G +
Sbjct: 298 GSETKKS---GKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHD 338
>UNIPROTKB|J9P388 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AAEX03006704
Ensembl:ENSCAFT00000046041 Uniprot:J9P388
Length = 410
Score = 115 (45.5 bits), Expect = 6.6e-05, Sum P(2) = 6.6e-05
Identities = 38/156 (24%), Positives = 72/156 (46%)
Query: 37 VRRLSQERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANV 96
+ R ++ L GH+ V + ++ S+++S S+D I VW Y + +++ GH+ +V
Sbjct: 95 IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLK-GHTDSV 153
Query: 97 FCTKFVPETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVE 156
F + S +L+ S + D ++L++ F I H V +A+
Sbjct: 154 QDISF--DHSGKLLASCSADMTIKLWDFQGFE-------CIRTM---HGHDHNVSSVAIM 201
Query: 157 VGNPHVVWSASEDGTLRQHDFRQGSSCPPAGSSHQE 192
H+V SAS D T++ + + G C + H+E
Sbjct: 202 PNGDHIV-SASRDKTIKMWEVQTGY-CVKTFTGHRE 235
Score = 58 (25.5 bits), Expect = 6.6e-05, Sum P(2) = 6.6e-05
Identities = 13/44 (29%), Positives = 25/44 (56%)
Query: 626 GTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDE 669
G++ K++ G+ G ++ SGS D +W+ TG + L+G +
Sbjct: 298 GSETKKS---GKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHD 338
>UNIPROTKB|P43034 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0016042 "lipid
catabolic process" evidence=IEA] [GO:0001667 "ameboidal cell
migration" evidence=IEA] [GO:0001961 "positive regulation of
cytokine-mediated signaling pathway" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0007097 "nuclear migration"
evidence=IEA] [GO:0009306 "protein secretion" evidence=IEA]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IEA] [GO:0017145 "stem cell division" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031982 "vesicle"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0033267 "axon part" evidence=IEA] [GO:0036035 "osteoclast
development" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0045505 "dynein intermediate chain binding"
evidence=IEA] [GO:0045773 "positive regulation of axon extension"
evidence=IEA] [GO:0045931 "positive regulation of mitotic cell
cycle" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IEA] [GO:0031965 "nuclear membrane"
evidence=IEA] [GO:0001764 "neuron migration" evidence=ISS;IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0000132
"establishment of mitotic spindle orientation" evidence=IMP]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:0045502 "dynein binding"
evidence=IDA] [GO:0007017 "microtubule-based process" evidence=IDA]
[GO:0005635 "nuclear envelope" evidence=IDA] [GO:0005938 "cell
cortex" evidence=IDA] [GO:0000235 "astral microtubule"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IMP] [GO:0005813 "centrosome"
evidence=ISS;IDA] [GO:0000086 "G2/M transition of mitotic cell
cycle" evidence=TAS] [GO:0000087 "M phase of mitotic cell cycle"
evidence=TAS] [GO:0000236 "mitotic prometaphase" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0005829
"cytosol" evidence=ISS;TAS] [GO:0048854 "brain morphogenesis"
evidence=IMP] [GO:0008201 "heparin binding" evidence=ISS]
[GO:0008344 "adult locomotory behavior" evidence=IMP] [GO:0021540
"corpus callosum morphogenesis" evidence=IMP] [GO:0021987 "cerebral
cortex development" evidence=IMP] [GO:0050885 "neuromuscular
process controlling balance" evidence=IMP] [GO:0000226 "microtubule
cytoskeleton organization" evidence=ISS] [GO:0007268 "synaptic
transmission" evidence=ISS] [GO:0007405 "neuroblast proliferation"
evidence=ISS] [GO:0008017 "microtubule binding" evidence=ISS]
[GO:0008090 "retrograde axon cargo transport" evidence=ISS]
[GO:0019226 "transmission of nerve impulse" evidence=ISS]
[GO:0030036 "actin cytoskeleton organization" evidence=ISS]
[GO:0032319 "regulation of Rho GTPase activity" evidence=ISS]
[GO:0047496 "vesicle transport along microtubule" evidence=ISS]
[GO:0043274 "phospholipase binding" evidence=ISS] [GO:0046469
"platelet activating factor metabolic process" evidence=ISS]
[GO:0034452 "dynactin binding" evidence=ISS] [GO:0001675 "acrosome
assembly" evidence=ISS] [GO:0007611 "learning or memory"
evidence=ISS] [GO:0021766 "hippocampus development" evidence=ISS]
[GO:0021819 "layer formation in cerebral cortex" evidence=ISS]
[GO:0031252 "cell leading edge" evidence=ISS] [GO:0031512 "motile
primary cilium" evidence=ISS] [GO:0031513 "nonmotile primary
cilium" evidence=ISS] [GO:0042803 "protein homodimerization
activity" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0051219 "phosphoprotein binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
EMBL:CH471108 Orphanet:217385 Pathway_Interaction_DB:lis1pathway
Reactome:REACT_115566 GO:GO:0033267 GO:GO:0005871 GO:GO:0000086
GO:GO:0042803 GO:GO:0031252 Reactome:REACT_21300 GO:GO:0000776
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0008201 GO:GO:0030426 GO:GO:0007611 GO:GO:0007405
GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773
GO:GO:0001675 GO:GO:0008017 Pathway_Interaction_DB:reelinpathway
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0051219 GO:GO:0000236 GO:GO:0048854 GO:GO:0034452
GO:GO:0021540 GO:GO:0045502 GO:GO:0021819 GO:GO:0047496
GO:GO:0010977 GO:GO:0017145 GO:GO:0031512 GO:GO:0021895
Orphanet:531 HOGENOM:HOG000184015 HOVERGEN:HBG006271 KO:K01062
OMA:WVRGLAF OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0043274
GO:GO:0046469 GO:GO:0051081 EMBL:L13385 EMBL:L13386 EMBL:L13387
EMBL:U72342 EMBL:U72334 EMBL:U72335 EMBL:U72336 EMBL:U72337
EMBL:U72338 EMBL:U72339 EMBL:U72340 EMBL:U72341 EMBL:AF208837
EMBL:AF208838 EMBL:AF400434 EMBL:AK313078 EMBL:BX538346
EMBL:BC064638 IPI:IPI00218728 IPI:IPI00760905 PIR:S36113
RefSeq:NP_000421.1 UniGene:Hs.77318 ProteinModelPortal:P43034
SMR:P43034 DIP:DIP-35691N IntAct:P43034 MINT:MINT-5004233
STRING:P43034 PhosphoSite:P43034 DMDM:1170794 PaxDb:P43034
PeptideAtlas:P43034 PRIDE:P43034 Ensembl:ENST00000397195
GeneID:5048 KEGG:hsa:5048 UCSC:uc002fuw.4 GeneCards:GC17P002496
HGNC:HGNC:8574 HPA:CAB004489 HPA:HPA020036 MIM:247200 MIM:601545
MIM:607432 neXtProt:NX_P43034 Orphanet:95232 PharmGKB:PA32905
InParanoid:P43034 PhylomeDB:P43034 ChiTaRS:PAFAH1B1 GenomeRNAi:5048
NextBio:19452 ArrayExpress:P43034 Bgee:P43034 CleanEx:HS_PAFAH1B1
Genevestigator:P43034 GermOnline:ENSG00000007168 GO:GO:0051660
Uniprot:P43034
Length = 410
Score = 115 (45.5 bits), Expect = 6.6e-05, Sum P(2) = 6.6e-05
Identities = 38/156 (24%), Positives = 72/156 (46%)
Query: 37 VRRLSQERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANV 96
+ R ++ L GH+ V + ++ S+++S S+D I VW Y + +++ GH+ +V
Sbjct: 95 IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLK-GHTDSV 153
Query: 97 FCTKFVPETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVE 156
F + S +L+ S + D ++L++ F I H V +A+
Sbjct: 154 QDISF--DHSGKLLASCSADMTIKLWDFQGFE-------CIRTM---HGHDHNVSSVAIM 201
Query: 157 VGNPHVVWSASEDGTLRQHDFRQGSSCPPAGSSHQE 192
H+V SAS D T++ + + G C + H+E
Sbjct: 202 PNGDHIV-SASRDKTIKMWEVQTGY-CVKTFTGHRE 235
Score = 58 (25.5 bits), Expect = 6.6e-05, Sum P(2) = 6.6e-05
Identities = 13/44 (29%), Positives = 25/44 (56%)
Query: 626 GTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDE 669
G++ K++ G+ G ++ SGS D +W+ TG + L+G +
Sbjct: 298 GSETKKS---GKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHD 338
>UNIPROTKB|F2Z521 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
GO:GO:0051081 EMBL:CU469125 ProteinModelPortal:F2Z521 SMR:F2Z521
PRIDE:F2Z521 Ensembl:ENSSSCT00000019411 Uniprot:F2Z521
Length = 410
Score = 115 (45.5 bits), Expect = 6.6e-05, Sum P(2) = 6.6e-05
Identities = 38/156 (24%), Positives = 72/156 (46%)
Query: 37 VRRLSQERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANV 96
+ R ++ L GH+ V + ++ S+++S S+D I VW Y + +++ GH+ +V
Sbjct: 95 IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLK-GHTDSV 153
Query: 97 FCTKFVPETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVE 156
F + S +L+ S + D ++L++ F I H V +A+
Sbjct: 154 QDISF--DHSGKLLASCSADMTIKLWDFQGFE-------CIRTM---HGHDHNVSSVAIM 201
Query: 157 VGNPHVVWSASEDGTLRQHDFRQGSSCPPAGSSHQE 192
H+V SAS D T++ + + G C + H+E
Sbjct: 202 PNGDHIV-SASRDKTIKMWEVQTGY-CVKTFTGHRE 235
Score = 58 (25.5 bits), Expect = 6.6e-05, Sum P(2) = 6.6e-05
Identities = 13/44 (29%), Positives = 25/44 (56%)
Query: 626 GTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDE 669
G++ K++ G+ G ++ SGS D +W+ TG + L+G +
Sbjct: 298 GSETKKS---GKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHD 338
>MGI|MGI:109520 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10090 "Mus musculus" [GO:0000132
"establishment of mitotic spindle orientation" evidence=ISO]
[GO:0000226 "microtubule cytoskeleton organization"
evidence=IGI;IMP] [GO:0000235 "astral microtubule" evidence=ISO]
[GO:0000776 "kinetochore" evidence=ISO] [GO:0001667 "ameboidal cell
migration" evidence=IMP] [GO:0001675 "acrosome assembly"
evidence=IMP] [GO:0001764 "neuron migration" evidence=ISO;IGI;IMP]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=ISO;ISS] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813
"centrosome" evidence=ISO;IDA] [GO:0005829 "cytosol" evidence=ISO]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005871 "kinesin
complex" evidence=ISO] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005875 "microtubule associated complex" evidence=ISO;IDA]
[GO:0005938 "cell cortex" evidence=ISO] [GO:0006629 "lipid
metabolic process" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0007017 "microtubule-based process" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=ISO]
[GO:0007268 "synaptic transmission" evidence=IMP] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0007611 "learning or memory"
evidence=IMP] [GO:0008017 "microtubule binding" evidence=ISO;IDA]
[GO:0008090 "retrograde axon cargo transport" evidence=IDA]
[GO:0008344 "adult locomotory behavior" evidence=ISO;IMP]
[GO:0009306 "protein secretion" evidence=IMP] [GO:0010977 "negative
regulation of neuron projection development" evidence=ISO]
[GO:0015630 "microtubule cytoskeleton" evidence=IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0016042 "lipid catabolic process"
evidence=IEA] [GO:0016477 "cell migration" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017145 "stem
cell division" evidence=ISO] [GO:0019226 "transmission of nerve
impulse" evidence=IMP] [GO:0021540 "corpus callosum morphogenesis"
evidence=ISO] [GO:0021766 "hippocampus development"
evidence=IGI;IMP] [GO:0021819 "layer formation in cerebral cortex"
evidence=IGI] [GO:0021895 "cerebral cortex neuron differentiation"
evidence=ISO] [GO:0021987 "cerebral cortex development"
evidence=ISO;IGI;IMP] [GO:0030036 "actin cytoskeleton organization"
evidence=IMP] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=ISO] [GO:0031023 "microtubule
organizing center organization" evidence=ISO] [GO:0031252 "cell
leading edge" evidence=IDA] [GO:0031512 "motile primary cilium"
evidence=IDA] [GO:0031513 "nonmotile primary cilium" evidence=IDA]
[GO:0031982 "vesicle" evidence=ISO] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IMP] [GO:0032403 "protein complex
binding" evidence=ISO] [GO:0033267 "axon part" evidence=ISO]
[GO:0036035 "osteoclast development" evidence=IMP] [GO:0042803
"protein homodimerization activity" evidence=IPI] [GO:0043005
"neuron projection" evidence=ISO] [GO:0043025 "neuronal cell body"
evidence=ISO] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=ISO]
[GO:0045773 "positive regulation of axon extension" evidence=ISO]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=ISO] [GO:0046329 "negative regulation of JNK cascade"
evidence=IGI] [GO:0047496 "vesicle transport along microtubule"
evidence=IGI] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0048854 "brain morphogenesis" evidence=ISO]
[GO:0050885 "neuromuscular process controlling balance"
evidence=ISO;IMP] [GO:0051081 "nuclear envelope disassembly"
evidence=IMP] [GO:0051219 "phosphoprotein binding" evidence=IPI]
[GO:0051301 "cell division" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 MGI:MGI:109520
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0005875 GO:GO:0033267 GO:GO:0005871 GO:GO:0000226
GO:GO:0000776 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344
GO:GO:0050885 GO:GO:0009306 GO:GO:0030426 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0045773 GO:GO:0001675 GO:GO:0046329 GO:GO:0008017
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0048854 GO:GO:0021540 GO:GO:0001667 GO:GO:0021819
GO:GO:0047496 GO:GO:0036035 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 GO:GO:0001961 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081 ChiTaRS:PAFAH1B1
GO:GO:0051660 EMBL:U95116 EMBL:U95120 EMBL:U95119 EMBL:L25109
EMBL:AY189217 EMBL:AY189218 EMBL:BC014831 EMBL:BC026141
IPI:IPI00227864 IPI:IPI00309207 RefSeq:NP_038653.1
UniGene:Mm.397111 PDB:1UUJ PDB:1VYH PDBsum:1UUJ PDBsum:1VYH
ProteinModelPortal:P63005 SMR:P63005 DIP:DIP-29555N IntAct:P63005
STRING:P63005 PhosphoSite:P63005 REPRODUCTION-2DPAGE:P63005
PaxDb:P63005 PRIDE:P63005 Ensembl:ENSMUST00000021091
Ensembl:ENSMUST00000102520 GeneID:18472 KEGG:mmu:18472
InParanoid:P63005 EvolutionaryTrace:P63005 NextBio:294162
Bgee:P63005 Genevestigator:P63005 GermOnline:ENSMUSG00000020745
Uniprot:P63005
Length = 410
Score = 115 (45.5 bits), Expect = 6.6e-05, Sum P(2) = 6.6e-05
Identities = 38/156 (24%), Positives = 72/156 (46%)
Query: 37 VRRLSQERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANV 96
+ R ++ L GH+ V + ++ S+++S S+D I VW Y + +++ GH+ +V
Sbjct: 95 IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLK-GHTDSV 153
Query: 97 FCTKFVPETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVE 156
F + S +L+ S + D ++L++ F I H V +A+
Sbjct: 154 QDISF--DHSGKLLASCSADMTIKLWDFQGFE-------CIRTM---HGHDHNVSSVAIM 201
Query: 157 VGNPHVVWSASEDGTLRQHDFRQGSSCPPAGSSHQE 192
H+V SAS D T++ + + G C + H+E
Sbjct: 202 PNGDHIV-SASRDKTIKMWEVQTGY-CVKTFTGHRE 235
Score = 58 (25.5 bits), Expect = 6.6e-05, Sum P(2) = 6.6e-05
Identities = 13/44 (29%), Positives = 25/44 (56%)
Query: 626 GTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDE 669
G++ K++ G+ G ++ SGS D +W+ TG + L+G +
Sbjct: 298 GSETKKS---GKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHD 338
>RGD|620331 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10116 "Rattus norvegicus"
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA;ISO] [GO:0000226 "microtubule cytoskeleton
organization" evidence=ISO] [GO:0000235 "astral microtubule"
evidence=IEA;ISO] [GO:0000776 "kinetochore" evidence=IEA;ISO]
[GO:0001667 "ameboidal cell migration" evidence=IEA;ISO]
[GO:0001675 "acrosome assembly" evidence=IEA;ISO] [GO:0001764
"neuron migration" evidence=ISO;IMP] [GO:0001961 "positive
regulation of cytokine-mediated signaling pathway"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005635 "nuclear envelope"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0005813 "centrosome" evidence=IEA;ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0005871 "kinesin complex" evidence=IDA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0005875 "microtubule
associated complex" evidence=ISO] [GO:0005938 "cell cortex"
evidence=IEA;ISO] [GO:0006810 "transport" evidence=IEA] [GO:0007017
"microtubule-based process" evidence=ISO] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=IMP]
[GO:0007268 "synaptic transmission" evidence=IEA;ISO] [GO:0007405
"neuroblast proliferation" evidence=IEA;ISO] [GO:0007420 "brain
development" evidence=IEP] [GO:0007611 "learning or memory"
evidence=IEA;ISO] [GO:0008017 "microtubule binding"
evidence=IEA;ISO] [GO:0008090 "retrograde axon cargo transport"
evidence=IEA;ISO] [GO:0008344 "adult locomotory behavior"
evidence=IEA;ISO] [GO:0009306 "protein secretion" evidence=IEA;ISO]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IMP] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0016042 "lipid catabolic process" evidence=IEA] [GO:0016477
"cell migration" evidence=ISO] [GO:0017145 "stem cell division"
evidence=IMP] [GO:0019226 "transmission of nerve impulse"
evidence=ISO] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA;ISO] [GO:0021766 "hippocampus development"
evidence=IEA;ISO] [GO:0021819 "layer formation in cerebral cortex"
evidence=IEA;ISO] [GO:0021895 "cerebral cortex neuron
differentiation" evidence=IMP] [GO:0021987 "cerebral cortex
development" evidence=ISO] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA;ISO] [GO:0030426 "growth cone"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA;ISO] [GO:0031252 "cell leading edge"
evidence=IEA;ISO] [GO:0031512 "motile primary cilium"
evidence=IEA;ISO] [GO:0031965 "nuclear membrane" evidence=IEA]
[GO:0031982 "vesicle" evidence=IDA] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IEA;ISO] [GO:0032403 "protein complex
binding" evidence=IPI] [GO:0033267 "axon part" evidence=IDA]
[GO:0036035 "osteoclast development" evidence=IEA;ISO] [GO:0042803
"protein homodimerization activity" evidence=IEA;ISO] [GO:0043005
"neuron projection" evidence=IDA] [GO:0043025 "neuronal cell body"
evidence=IDA] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=IDA]
[GO:0045773 "positive regulation of axon extension" evidence=IMP]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=IMP] [GO:0046329 "negative regulation of JNK cascade"
evidence=IEA;ISO] [GO:0047179 "platelet-activating factor
acetyltransferase activity" evidence=TAS] [GO:0047496 "vesicle
transport along microtubule" evidence=IEA;ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA;ISO] [GO:0048854
"brain morphogenesis" evidence=IEA;ISO] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA;ISO] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA;ISO] [GO:0051219 "phosphoprotein
binding" evidence=IEA;ISO] [GO:0051301 "cell division"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IMP] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0031513 "nonmotile primary cilium" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 RGD:620331
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 115 (45.5 bits), Expect = 6.6e-05, Sum P(2) = 6.6e-05
Identities = 38/156 (24%), Positives = 72/156 (46%)
Query: 37 VRRLSQERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANV 96
+ R ++ L GH+ V + ++ S+++S S+D I VW Y + +++ GH+ +V
Sbjct: 95 IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLK-GHTDSV 153
Query: 97 FCTKFVPETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVE 156
F + S +L+ S + D ++L++ F I H V +A+
Sbjct: 154 QDISF--DHSGKLLASCSADMTIKLWDFQGFE-------CIRTM---HGHDHNVSSVAIM 201
Query: 157 VGNPHVVWSASEDGTLRQHDFRQGSSCPPAGSSHQE 192
H+V SAS D T++ + + G C + H+E
Sbjct: 202 PNGDHIV-SASRDKTIKMWEVQTGY-CVKTFTGHRE 235
Score = 58 (25.5 bits), Expect = 6.6e-05, Sum P(2) = 6.6e-05
Identities = 13/44 (29%), Positives = 25/44 (56%)
Query: 626 GTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDE 669
G++ K++ G+ G ++ SGS D +W+ TG + L+G +
Sbjct: 298 GSETKKS---GKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHD 338
>UNIPROTKB|P63004 [details] [associations]
symbol:Pafah1b1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:10116 "Rattus norvegicus" [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
RGD:620331 GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 115 (45.5 bits), Expect = 6.6e-05, Sum P(2) = 6.6e-05
Identities = 38/156 (24%), Positives = 72/156 (46%)
Query: 37 VRRLSQERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANV 96
+ R ++ L GH+ V + ++ S+++S S+D I VW Y + +++ GH+ +V
Sbjct: 95 IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLK-GHTDSV 153
Query: 97 FCTKFVPETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVE 156
F + S +L+ S + D ++L++ F I H V +A+
Sbjct: 154 QDISF--DHSGKLLASCSADMTIKLWDFQGFE-------CIRTM---HGHDHNVSSVAIM 201
Query: 157 VGNPHVVWSASEDGTLRQHDFRQGSSCPPAGSSHQE 192
H+V SAS D T++ + + G C + H+E
Sbjct: 202 PNGDHIV-SASRDKTIKMWEVQTGY-CVKTFTGHRE 235
Score = 58 (25.5 bits), Expect = 6.6e-05, Sum P(2) = 6.6e-05
Identities = 13/44 (29%), Positives = 25/44 (56%)
Query: 626 GTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDE 669
G++ K++ G+ G ++ SGS D +W+ TG + L+G +
Sbjct: 298 GSETKKS---GKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHD 338
>FB|FBgn0031229 [details] [associations]
symbol:CG3436 species:7227 "Drosophila melanogaster"
[GO:0005682 "U5 snRNP" evidence=ISS] [GO:0000398 "mRNA splicing,
via spliceosome" evidence=IC;ISS] [GO:0030532 "small nuclear
ribonucleoprotein complex" evidence=ISS] [GO:0007067 "mitosis"
evidence=IMP] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0007067 EMBL:AE014134 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005682 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 HSSP:P16649 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 UniGene:Dm.1591 GeneID:33180
KEGG:dme:Dmel_CG3436 FlyBase:FBgn0031229 GenomeRNAi:33180
NextBio:782301 EMBL:AY070530 RefSeq:NP_608501.1 SMR:Q9VPL0
STRING:Q9VPL0 EnsemblMetazoa:FBtr0078119 UCSC:CG3436-RA
InParanoid:Q9VPL0 Uniprot:Q9VPL0
Length = 347
Score = 118 (46.6 bits), Expect = 7.2e-05, Sum P(2) = 7.2e-05
Identities = 43/165 (26%), Positives = 75/165 (45%)
Query: 42 QERELEGHQGCVNAISWNSKGS-LLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTK 100
++R +GH VN++ + +G LL SGSDD I +W + H++E+ C
Sbjct: 132 RQRRFKGHGNFVNSVQGSRRGQQLLCSGSDDRTIKIWDARKKHAAHTLESPFQVTAVC-- 189
Query: 101 FVPETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVEVGNP 160
F +T ++ V+SG D EV+++++ + A+ + H+ + +++
Sbjct: 190 F-GDTGEQ-VISGGIDNEVKIWDIRK--------QAVLHHL--RGHSDTITGMSLSPEGD 237
Query: 161 HVVWSASEDGTLRQHDFRQ---GSSCPPAGSSHQECRNILLDLRC 202
++ +A D TLR D R G C HQ L LRC
Sbjct: 238 FILTNAM-DNTLRVWDVRPYAPGERCVKVFQGHQHNFEKNL-LRC 280
Score = 52 (23.4 bits), Expect = 7.2e-05, Sum P(2) = 7.2e-05
Identities = 9/29 (31%), Positives = 16/29 (55%)
Query: 281 HLTHVTFSPNGEEVLLSYSGEHVYLMDVN 309
+L +SP +++ + HVY+ DVN
Sbjct: 276 NLLRCAWSPGSDKITSGSADRHVYIWDVN 304
>FB|FBgn0038927 [details] [associations]
symbol:CG6015 species:7227 "Drosophila melanogaster"
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;ISS]
[GO:0005681 "spliceosomal complex" evidence=ISS] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] [GO:0071011
"precatalytic spliceosome" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:AE014297 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 KO:K12816 GeneTree:ENSGT00530000063583 EMBL:AY069490
RefSeq:NP_651005.1 UniGene:Dm.20226 SMR:Q9VD52 IntAct:Q9VD52
STRING:Q9VD52 EnsemblMetazoa:FBtr0084183 GeneID:42593
KEGG:dme:Dmel_CG6015 UCSC:CG6015-RA FlyBase:FBgn0038927
InParanoid:Q9VD52 OMA:PEDIEGF OrthoDB:EOG493202 GenomeRNAi:42593
NextBio:829587 Uniprot:Q9VD52
Length = 576
Score = 112 (44.5 bits), Expect = 8.8e-05, Sum P(2) = 8.8e-05
Identities = 23/77 (29%), Positives = 40/77 (51%)
Query: 44 RELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVP 103
R GH+ + I+WN++G+ +S S D +I +W + ++ T FC KF P
Sbjct: 323 RTFSGHRQAIKDIAWNNRGTNFLSASYDRYIKLWDAETGDVVSRFTTRKMP--FCVKFHP 380
Query: 104 ETSDE-LVVSGAGDAEV 119
+ S + L V+G D ++
Sbjct: 381 DNSKQHLFVAGTSDKKI 397
Score = 64 (27.6 bits), Expect = 8.8e-05, Sum P(2) = 8.8e-05
Identities = 15/51 (29%), Positives = 26/51 (50%)
Query: 613 IDMKQRYVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIK 663
++ K+ + GH G Q F Y+ SG DG+ +IW+ +T ++ K
Sbjct: 493 MNRKKTFTGHMVSGYAC-QLDFSPDMS-YLVSGDGDGKCYIWDWKTTKMYK 541
>ZFIN|ZDB-GENE-020905-2 [details] [associations]
symbol:copa "coatomer protein complex, subunit alpha"
species:7955 "Danio rerio" [GO:0030117 "membrane coat"
evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0030903 "notochord development" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006692
InterPro:IPR010714 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
Pfam:PF06957 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-020905-2 GO:GO:0006886 GO:GO:0016192
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030126 GO:GO:0030903 HOGENOM:HOG000195913 InterPro:IPR016391
PIRSF:PIRSF003354 HOVERGEN:HBG005379 EMBL:AY294009 IPI:IPI00509057
UniGene:Dr.2921 ProteinModelPortal:Q6JWU9 STRING:Q6JWU9
InParanoid:Q6JWU9 NextBio:20804725 ArrayExpress:Q6JWU9
Uniprot:Q6JWU9
Length = 1226
Score = 133 (51.9 bits), Expect = 8.8e-05, P = 8.8e-05
Identities = 50/199 (25%), Positives = 89/199 (44%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPET 105
L GH + ++ + ++S SDD I +W++ SR + + TGH+ V C +F P
Sbjct: 89 LLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRTCV-CVLTGHNHYVMCAQFHP-- 145
Query: 106 SDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVEVGNPHVVWS 165
S++LVVS + D VR++++S GL ++P A+ R + + + + VV
Sbjct: 146 SEDLVVSASLDQTVRVWDIS-----GLRKKNLSPGAV-DTEVRGISGVDLFGASDAVVKH 199
Query: 166 ASEDGTLRQHDFRQGSSCPPAGSSHQECRNILLDLRCGAKRSLADPPKQTLSLKSCDISS 225
E G R ++ P S + R + + +K D + + SC +
Sbjct: 200 VLEQGHDRGVNWAAFHPSMPLIVSGADDRQVKIWRMNESKAWELDTCRGHYNNVSCAVFH 259
Query: 226 TRPHLLLVGGSDAFARLYD 244
R L+L D R++D
Sbjct: 260 PRQELILSNSEDKSIRVWD 278
>WB|WBGene00015974 [details] [associations]
symbol:C18E3.5 species:6239 "Caenorhabditis elegans"
[GO:0018991 "oviposition" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0018991 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 HOGENOM:HOG000091644
OMA:HAGSVNE EMBL:FO080611 GeneTree:ENSGT00690000101787
RefSeq:NP_491325.1 ProteinModelPortal:O02097 SMR:O02097
STRING:O02097 PaxDb:O02097 EnsemblMetazoa:C18E3.5.1
EnsemblMetazoa:C18E3.5.2 GeneID:172015 KEGG:cel:CELE_C18E3.5
UCSC:C18E3.5 CTD:172015 WormBase:C18E3.5 InParanoid:O02097
NextBio:873669 Uniprot:O02097
Length = 331
Score = 122 (48.0 bits), Expect = 8.9e-05, Sum P(2) = 8.9e-05
Identities = 37/133 (27%), Positives = 63/133 (47%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPET 105
L+GH G + ++S GS L S D I +W+ ++ GH + KF ++
Sbjct: 32 LQGHGGEIYTSQFSSDGSFLASAGYDQQIFLWNVFGECENFAVLKGHKGAIMEVKFNADS 91
Query: 106 SDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVEVGNPHVVWS 165
S +VS D VR++++ +G + + ++ HT V + V P ++ S
Sbjct: 92 SH--LVSAGTDKTVRVWDME--TGSCIRN--------FKSHTDIVNSVDVNRRGPQMICS 139
Query: 166 ASEDGTLRQHDFR 178
AS+DGT+ HD R
Sbjct: 140 ASDDGTVMVHDMR 152
Score = 46 (21.3 bits), Expect = 8.9e-05, Sum P(2) = 8.9e-05
Identities = 15/68 (22%), Positives = 31/68 (45%)
Query: 606 PYQPETVIDMKQRYVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKML 665
P+ P + + + H N ++ + + R +YI +GS D ++W ++ + L
Sbjct: 236 PFVPAQRLVARYQGASH-NFEKNLLKCGW-SPRDNYITAGSADRFVYVWNAKSRACVYKL 293
Query: 666 LGDEAGNV 673
G G+V
Sbjct: 294 PG-HLGSV 300
>UNIPROTKB|Q9BRX9 [details] [associations]
symbol:WDR83 "WD repeat domain-containing protein 83"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IDA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;IDA] [GO:0000375 "RNA
splicing, via transesterification reactions" evidence=IDA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:CH471106 GO:GO:0000398 GO:GO:0071013 UniGene:Hs.657204
HOGENOM:HOG000091642 CTD:84292 HOVERGEN:HBG105288 KO:K13124
OrthoDB:EOG4ZCT4V OMA:CKQGAVR EMBL:AK223195 EMBL:AK314164
EMBL:BC005870 IPI:IPI00031581 RefSeq:NP_001093207.1
RefSeq:NP_115708.1 ProteinModelPortal:Q9BRX9 SMR:Q9BRX9
STRING:Q9BRX9 PhosphoSite:Q9BRX9 DMDM:74761224 PRIDE:Q9BRX9
DNASU:84292 Ensembl:ENST00000242796 Ensembl:ENST00000418543
GeneID:84292 KEGG:hsa:84292 UCSC:uc002mue.4 GeneCards:GC19P012777
HGNC:HGNC:32672 HPA:HPA042629 HPA:HPA042838 neXtProt:NX_Q9BRX9
PharmGKB:PA165394765 InParanoid:Q9BRX9 PhylomeDB:Q9BRX9
ChiTaRS:WDR83 GenomeRNAi:84292 NextBio:73931 ArrayExpress:Q9BRX9
Bgee:Q9BRX9 Genevestigator:Q9BRX9 GermOnline:ENSG00000123154
Uniprot:Q9BRX9
Length = 315
Score = 104 (41.7 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 24/81 (29%), Positives = 44/81 (54%)
Query: 44 RELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVP 103
R+ GH G VN + +N + ++++SGS D+ I W SR+ ++T A +
Sbjct: 103 RKFRGHAGKVNTVQFNEEATVILSGSIDSSIRCWDCRSRRP-EPVQTLDEARDGVSSV-- 159
Query: 104 ETSDELVVSGAGDAEVRLFNL 124
+ SD +++G+ D VR ++L
Sbjct: 160 KVSDHEILAGSVDGRVRRYDL 180
Score = 71 (30.1 bits), Expect = 0.00044, Sum P(3) = 0.00044
Identities = 27/89 (30%), Positives = 45/89 (50%)
Query: 40 LSQER--ELEGHQGCVNAISWNSKGSLLIS-GSDDTHINVWSYSSRKLLHSIETGHSANV 96
L Q+R L+ QG V A+ +N G+ ++ GSD T + +W+ LL + +GH V
Sbjct: 13 LPQKRLKTLDCGQGAVRAVRFNVDGNYCLTCGSDKT-LKLWNPLRGTLLRTY-SGHGYEV 70
Query: 97 FCTKFVPETSDELVVSGAGDAEVRLFNLS 125
+ S + SG GD V L++++
Sbjct: 71 LDAAGSFDNSS--LCSGGGDKAVVLWDVA 97
Score = 68 (29.0 bits), Expect = 0.00044, Sum P(3) = 0.00044
Identities = 28/93 (30%), Positives = 40/93 (43%)
Query: 162 VVWSASEDGTLRQHDFRQGSSCPPAGSSHQECRNIL---LD--LRCGAKRSLADPPKQTL 216
V+W + +R+ FR + ++E IL +D +RC RS P QTL
Sbjct: 92 VLWDVASGQVVRK--FRGHAGKVNTVQFNEEATVILSGSIDSSIRCWDCRSRRPEPVQTL 149
Query: 217 SLKSCDISSTR--PHLLLVGGSDAFARLYDRRM 247
+SS + H +L G D R YD RM
Sbjct: 150 DEARDGVSSVKVSDHEILAGSVDGRVRRYDLRM 182
Score = 64 (27.6 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 15/43 (34%), Positives = 22/43 (51%)
Query: 619 YVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRL 661
Y GH N + K L +R ++ S S+DG+ F W+ G L
Sbjct: 229 YKGHKN--QEYKLDCCLSERDTHVVSCSEDGKVFFWDLVEGAL 269
>FB|FBgn0034876 [details] [associations]
symbol:wmd "wing morphogenesis defect" species:7227
"Drosophila melanogaster" [GO:0005102 "receptor binding"
evidence=ISS] [GO:0007476 "imaginal disc-derived wing
morphogenesis" evidence=IMP] [GO:0005875 "microtubule associated
complex" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE013599 GO:GO:0005875 Gene3D:2.130.10.10
SUPFAM:SSF50978 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007476 GeneTree:ENSGT00630000089849 KO:K13137 OMA:LWQTTVG
EMBL:AY061000 RefSeq:NP_001097436.1 RefSeq:NP_611804.1
UniGene:Dm.3756 SMR:Q9W1N4 STRING:Q9W1N4 EnsemblMetazoa:FBtr0072114
EnsemblMetazoa:FBtr0113112 GeneID:37727 KEGG:dme:Dmel_CG3957
UCSC:CG3957-RA CTD:37727 FlyBase:FBgn0034876 InParanoid:Q9W1N4
OrthoDB:EOG4QBZMZ ChiTaRS:wmd GenomeRNAi:37727 NextBio:805102
Uniprot:Q9W1N4
Length = 328
Score = 105 (42.0 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 39/134 (29%), Positives = 62/134 (46%)
Query: 47 EGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPETS 106
EGH+G V + N +L SG+ D VW+ + +HS + H V F +
Sbjct: 59 EGHKGAVWNATLNRNATLAASGAADFTGKVWNAVTGAEIHSFQ--HKHIVKSVAF--DRD 114
Query: 107 DELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVEVGNPHVVWSA 166
E +V+G+ + VR+FNL + + P Y HT +K+ G+ ++ SA
Sbjct: 115 SENIVTGSNEKLVRVFNLEQPEAQ--------PEE-YAGHTGAIKRALFCRGDKCII-SA 164
Query: 167 SEDGTLRQHDFRQG 180
+ED T+R D G
Sbjct: 165 AEDKTVRLWDRMTG 178
Score = 63 (27.2 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 17/44 (38%), Positives = 23/44 (52%)
Query: 639 GDYIASGSDDGRWFIWEKQTGR---LIKMLLGDEAGNVISSMEE 679
G+ ASGS+DG +W+ G+ L K + GN ISS E
Sbjct: 281 GELYASGSEDGTLRLWQTTVGKTYGLWKCTEPADLGNSISSPRE 324
>MGI|MGI:1923896 [details] [associations]
symbol:Wdr38 "WD repeat domain 38" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1923896 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00700000104017
HSSP:P63005 EMBL:AL844588 HOGENOM:HOG000091642 EMBL:AK007246
EMBL:AK077027 EMBL:BC115629 IPI:IPI00112284 RefSeq:NP_083963.1
UniGene:Mm.358777 UniGene:Mm.477090 ProteinModelPortal:Q9D994
SMR:Q9D994 PRIDE:Q9D994 Ensembl:ENSMUST00000039535
Ensembl:ENSMUST00000112872 GeneID:76646 KEGG:mmu:76646
UCSC:uc008jnx.2 CTD:401551 HOVERGEN:HBG106736 InParanoid:Q9D994
OMA:VARAKCL OrthoDB:EOG4ZW5BD ChiTaRS:WDR38 NextBio:345540
Bgee:Q9D994 CleanEx:MM_WDR38 Genevestigator:Q9D994 Uniprot:Q9D994
Length = 303
Score = 102 (41.0 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 25/78 (32%), Positives = 41/78 (52%)
Query: 49 HQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPETSDE 108
H G VN +++ G L++ SDD + VW S +LL + GH V F P+
Sbjct: 25 HHGEVNCSAFSPDGRTLLTASDDGCVYVWGTKSGRLLWRL-AGHRGPVKSCCFSPD--GR 81
Query: 109 LVVSGAGDAEVRLFNLSR 126
L+ S + D +RL++++R
Sbjct: 82 LIASSSSDHSIRLWDVAR 99
Score = 65 (27.9 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 12/26 (46%), Positives = 18/26 (69%)
Query: 642 IASGSDDGRWFIWEKQTGRLIKMLLG 667
+ASG D R +WE Q+GR + +L+G
Sbjct: 125 LASGGWDKRAIVWEVQSGRRVHLLVG 150
>TAIR|locus:2158044 [details] [associations]
symbol:AT5G49430 "AT5G49430" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001487
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00439
PROSITE:PS50014 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00297
SMART:SM00320 EMBL:CP002688 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 Gene3D:1.20.920.10
SUPFAM:SSF47370 GO:GO:0080008 KO:K11797 IPI:IPI00523511
RefSeq:NP_199754.2 UniGene:At.51087 ProteinModelPortal:F4K639
PRIDE:F4K639 EnsemblPlants:AT5G49430.1 GeneID:835003
KEGG:ath:AT5G49430 OMA:CCAFNAN Uniprot:F4K639
Length = 1677
Score = 144 (55.7 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 43/153 (28%), Positives = 73/153 (47%)
Query: 34 SSLVRRLSQERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHS 93
SS+V+++ + L GH+ V + G +I+GSDD + VWS + L S GH
Sbjct: 229 SSMVQKMQNIKRLRGHRNAVYCAILDRSGRYVITGSDDRLVKVWSMDTAYCLASCR-GHE 287
Query: 94 ANVFCTKFVPETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKL 153
++ T +++ + S + D +R++ L GL P ++ + HT V +
Sbjct: 288 GDI--TDLAVSSNNIFIASASNDCVIRVWRLPD----GL------PVSVLRGHTGAVTAI 335
Query: 154 AVEV--GNPHVVWSASEDGTLRQHDFRQGSSCP 184
A G+P+ + S+S+DGT R D R P
Sbjct: 336 AFSPRPGSPYQLLSSSDDGTCRIWDARGAQFAP 368
Score = 40 (19.1 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 7/20 (35%), Positives = 13/20 (65%)
Query: 287 FSPNGEEVLLSYSGEHVYLM 306
FSP+G ++LS +Y++
Sbjct: 637 FSPDGTSIILSDDVGQLYIL 656
Score = 39 (18.8 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 8/34 (23%), Positives = 14/34 (41%)
Query: 641 YIASGSDDGRWFIWEKQTGRLIKMLLGDEAGNVI 674
++ + D R +W G L+ L G A +
Sbjct: 558 FVLAAIMDCRICVWNASDGSLVHSLTGHTASTYV 591
>SGD|S000004699 [details] [associations]
symbol:UTP15 "Nucleolar protein" species:4932 "Saccharomyces
cerevisiae" [GO:0034455 "t-UTP complex" evidence=IDA] [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0033553 "rDNA heterochromatin" evidence=IDA]
[GO:0032040 "small-subunit processome" evidence=IDA] [GO:0030686
"90S preribosome" evidence=IDA] [GO:0030515 "snoRNA binding"
evidence=IPI] [GO:0045943 "positive regulation of transcription
from RNA polymerase I promoter" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR018983
Pfam:PF00400 Pfam:PF09384 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SGD:S000004699 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030515 eggNOG:COG2319
GO:GO:0006351 EMBL:BK006946 EMBL:Z49259 GO:GO:0033553 GO:GO:0032040
GO:GO:0045943 GO:GO:0000462 GO:GO:0034455
GeneTree:ENSGT00390000004228 HOGENOM:HOG000185028 KO:K14549
OMA:QFEGHTK OrthoDB:EOG4TB7KP PIR:S54469 RefSeq:NP_013811.1
ProteinModelPortal:Q04305 SMR:Q04305 DIP:DIP-1962N IntAct:Q04305
MINT:MINT-406079 STRING:Q04305 PaxDb:Q04305 PeptideAtlas:Q04305
EnsemblFungi:YMR093W GeneID:855118 KEGG:sce:YMR093W CYGD:YMR093w
NextBio:978467 Genevestigator:Q04305 GermOnline:YMR093W
Uniprot:Q04305
Length = 513
Score = 127 (49.8 bits), Expect = 0.00013, P = 0.00013
Identities = 51/172 (29%), Positives = 81/172 (47%)
Query: 30 LQMHSSLVRRLSQERELEGHQGCVNAISWNSKGSLLISGSDDTHINVW-SYSSRKLLHSI 88
+Q+ SS R++ + + V + S+ S G LL +G ++V+ SY+ R +L SI
Sbjct: 63 VQIFSSRTRQVI--KTFSRFKDVVYSASFRSDGKLLCAGDATGLVSVYDSYNPRTILLSI 120
Query: 89 ETG-HSANVFCTKFVPETSDELVVSGAGDAEV-RLFNLSRFSGRGLDDNAITPSALYQCH 146
H +V TKF T D +++ A D V RL+++S NA P
Sbjct: 121 NASTHPTHV--TKF--HTQDNKILATASDDRVTRLWDIS---------NAYEPQLELTGA 167
Query: 147 TRRVKKLAVEVGNPHVVWSASEDGTLRQHDFRQGSSCPPAGSSH-QECRNIL 197
T V+ L+ PH+V + S DG +R +D R S P +H Q N++
Sbjct: 168 TDYVRTLSFIPAAPHLVATGSYDGLIRLYDTRSSGSTPIYSLNHDQPVENVI 219
>ZFIN|ZDB-GENE-040426-1954 [details] [associations]
symbol:katnb1 "katanin p80 (WD repeat containing)
subunit B 1" species:7955 "Danio rerio" [GO:0008017 "microtubule
binding" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0000922 "spindle pole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1954 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 HOGENOM:HOG000008039 GO:GO:0008352
HAMAP:MF_03022 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
EMBL:BC047819 IPI:IPI00483795 RefSeq:NP_998183.1 UniGene:Dr.76809
ProteinModelPortal:Q7ZUV2 Ensembl:ENSDART00000014632 GeneID:406291
KEGG:dre:406291 InParanoid:Q7ZUV2 OMA:YWERNDI OrthoDB:EOG470TGV
NextBio:20817922 ArrayExpress:Q7ZUV2 Bgee:Q7ZUV2 Uniprot:Q7ZUV2
Length = 694
Score = 126 (49.4 bits), Expect = 0.00025, P = 0.00025
Identities = 42/154 (27%), Positives = 73/154 (47%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPET 105
L GH V I +NS +++GS + +W + K+L ++ GH A++ F P
Sbjct: 59 LTGHTSAVGCIQFNSSEERVVAGSLSGSLRLWDLEAAKILRTL-MGHKASISSLDFHP-- 115
Query: 106 SDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVEVGNPHVVW- 164
E + SG+ D+ ++L+++ R +G Y+ HT+ V+ LA +P W
Sbjct: 116 MGEYLASGSVDSNIKLWDVRR---KGCVFR-------YKGHTQAVRCLAF---SPDGKWL 162
Query: 165 -SASEDGTLRQHDFRQGSSCPPAGSSHQECRNIL 197
SAS+D T++ D G +SH N++
Sbjct: 163 ASASDDSTVKLWDLIAGKMITEF-TSHTSAVNVV 195
Score = 120 (47.3 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 27/82 (32%), Positives = 49/82 (59%)
Query: 44 RELEGHQGCVNA-ISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFV 102
+E+ H V++ + S G LL +G +D +N+W+ S + S+ TGH++ V C +F
Sbjct: 14 QEIVAHSSNVSSLVLGKSSGRLLATGGEDCRVNIWAVSKPNCIMSL-TGHTSAVGCIQF- 71
Query: 103 PETSDELVVSGAGDAEVRLFNL 124
+S+E VV+G+ +RL++L
Sbjct: 72 -NSSEERVVAGSLSGSLRLWDL 92
Score = 56 (24.8 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 14/45 (31%), Positives = 23/45 (51%)
Query: 618 RYVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLI 662
RY GH ++ +F G ++AS SDD +W+ G++I
Sbjct: 142 RYKGHTQA---VRCLAF-SPDGKWLASASDDSTVKLWDLIAGKMI 182
>ZFIN|ZDB-GENE-050419-255 [details] [associations]
symbol:daw1 "dynein assembly factor with WDR repeat
domains 1" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0007368 "determination of
left/right symmetry" evidence=IMP] [GO:0070286 "axonemal dynein
complex assembly" evidence=IMP] [GO:0060271 "cilium morphogenesis"
evidence=IMP] [GO:0060285 "ciliary cell motility" evidence=IMP]
[GO:0042995 "cell projection" evidence=IEA] [GO:0005929 "cilium"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-050419-255 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005929
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007368
GeneTree:ENSGT00700000104017 GO:GO:0060271 GO:GO:0070286
GO:GO:0060285 EMBL:BX908751 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:BC124403 EMBL:BC124455 IPI:IPI00504169
RefSeq:NP_001037817.1 UniGene:Dr.108235 ProteinModelPortal:Q1LV15
Ensembl:ENSDART00000142790 GeneID:556760 KEGG:dre:556760
InParanoid:Q05AM0 NextBio:20881649 ArrayExpress:Q1LV15 Bgee:Q1LV15
Uniprot:Q1LV15
Length = 415
Score = 115 (45.5 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 26/80 (32%), Positives = 47/80 (58%)
Query: 46 LEGHQGCVNAISWNSK-GSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPE 104
LEGH+ V AI++N+ G + +GS D +WS + K ++ GH+A + C F P+
Sbjct: 130 LEGHRNVVYAIAFNNPYGDKVATGSFDKTCKLWSAETGKCFYTFR-GHTAEIVCLAFNPQ 188
Query: 105 TSDELVVSGAGDAEVRLFNL 124
++ LV +G+ D +L+++
Sbjct: 189 ST--LVATGSMDTTAKLWDV 206
Score = 55 (24.4 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 13/51 (25%), Positives = 25/51 (49%)
Query: 639 GDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAG-NVISSMEECGLLLYFSI 688
GD + +GS D +W+ +GR + +L G + + +C L+ S+
Sbjct: 231 GDRLVTGSFDHTAILWDVPSGRKVHVLSGHRGEISCVQFNWDCSLIATASL 281
>UNIPROTKB|Q9GL51 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0031965 "nuclear
membrane" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 GO:GO:0005737 GO:GO:0007399
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0016042 GO:GO:0006810 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 EMBL:AF319658
RefSeq:NP_999415.1 UniGene:Ssc.802 ProteinModelPortal:Q9GL51
SMR:Q9GL51 STRING:Q9GL51 PRIDE:Q9GL51 GeneID:397482 KEGG:ssc:397482
Uniprot:Q9GL51
Length = 410
Score = 112 (44.5 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 37/156 (23%), Positives = 72/156 (46%)
Query: 37 VRRLSQERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANV 96
+ R ++ L GH+ V + ++ S+++S S+D I VW Y + +++ GH+ +V
Sbjct: 95 IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLK-GHTDSV 153
Query: 97 FCTKFVPETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVE 156
F + S +L+ S + D ++L++ F I H V +A+
Sbjct: 154 QDISF--DHSGKLLASCSADMTIKLWDFQGFE-------CIRTM---HGHDHNVSSVAIM 201
Query: 157 VGNPHVVWSASEDGTLRQHDFRQGSSCPPAGSSHQE 192
H+V SA+ D T++ + + G C + H+E
Sbjct: 202 PNGDHIV-SAARDKTIKMWEVQTGY-CVKTFTGHRE 235
Score = 58 (25.5 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 13/44 (29%), Positives = 25/44 (56%)
Query: 626 GTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDE 669
G++ K++ G+ G ++ SGS D +W+ TG + L+G +
Sbjct: 298 GSETKKS---GKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHD 338
>TAIR|locus:2176897 [details] [associations]
symbol:AT5G52820 "AT5G52820" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0051604 "protein
maturation" evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AB009055 HSSP:P16649
InterPro:IPR011044 SUPFAM:SSF50969 PRINTS:PR00319 GO:GO:0080008
EMBL:AK227330 EMBL:BT004562 IPI:IPI00528132 RefSeq:NP_200094.1
UniGene:At.29592 ProteinModelPortal:Q9FLX9 SMR:Q9FLX9 STRING:Q9FLX9
PaxDb:Q9FLX9 PRIDE:Q9FLX9 EnsemblPlants:AT5G52820.1 GeneID:835359
KEGG:ath:AT5G52820 GeneFarm:3344 TAIR:At5g52820
HOGENOM:HOG000091641 InParanoid:Q9FLX9 KO:K14855 OMA:HFTCKGH
PhylomeDB:Q9FLX9 ProtClustDB:CLSN2686131 Genevestigator:Q9FLX9
InterPro:IPR012972 Pfam:PF08154 Uniprot:Q9FLX9
Length = 473
Score = 126 (49.4 bits), Expect = 0.00014, P = 0.00014
Identities = 27/75 (36%), Positives = 43/75 (57%)
Query: 48 GHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPETSD 107
GH G V +SW++ LL+SGS D+ + +W ++KL + GH+ VF + P+
Sbjct: 400 GHVGPVYQVSWSADSRLLLSGSKDSTLKIWEIRTKKLKQDLP-GHADEVFAVDWSPD--G 456
Query: 108 ELVVSGAGDAEVRLF 122
E VVSG D ++L+
Sbjct: 457 EKVVSGGKDRVLKLW 471
>ASPGD|ASPL0000032162 [details] [associations]
symbol:AN8468 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001305 InterPro:IPR018391 SMART:SM00564 InterPro:IPR011044
SUPFAM:SSF50969 EMBL:AACD01000153 HOGENOM:HOG000234485
RefSeq:XP_681737.1 ProteinModelPortal:Q5ATB2
EnsemblFungi:CADANIAT00002953 GeneID:2868693 KEGG:ani:AN8468.2
OMA:VTMGEVE OrthoDB:EOG41K2M8 Uniprot:Q5ATB2
Length = 1364
Score = 126 (49.4 bits), Expect = 0.00015, Sum P(3) = 0.00015
Identities = 46/179 (25%), Positives = 85/179 (47%)
Query: 22 TRPDVNHSLQMHSSL--VRRL--SQERELEGHQGCVNAISWNSKGSLLISGSDDTHINVW 77
TR N++L S L V + ++++ LE H G V ++ ++ G L+SGS D + +W
Sbjct: 718 TRRIFNYNLSGWSQLPKVEQTWSAEQQTLENHLGPVESVVFSPDGKQLVSGSYDDTVKIW 777
Query: 78 SYSSRKLLHSIETGHSANVFCTKFVPETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAI 137
++ +LL +++ GHS V F P+ +L+ SG+ D + L++ + +G L
Sbjct: 778 DPATGELLQTLD-GHSGTVESLAFSPD--GKLLASGSYDNTIDLWDSA--TGELLQT--- 829
Query: 138 TPSALYQCHTRRVKKLAVEVGNPHVVWSASEDGTLRQHDFRQGSSCPPAGSSHQECRNI 196
++ H + +A + SAS+D T++ D G S Q R++
Sbjct: 830 -----FEGHPHSIWSVAFAPDGKELA-SASDDSTIKIWDLATGELQQTLDSHSQSVRSV 882
Score = 123 (48.4 bits), Expect = 0.00030, Sum P(3) = 0.00030
Identities = 35/134 (26%), Positives = 69/134 (51%)
Query: 43 ERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFV 102
++ LEG G V +++++ G L SGS+ + +W+ ++ +LL ++E GHS +V F
Sbjct: 911 QQSLEGRSGWVKSVAFSPDGKKLASGSEKNTVKLWNPATGELLQTLE-GHSQSVRSVAFS 969
Query: 103 PETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVEVGNPHV 162
P+ + S + D ++L+N + +G L ++ H ++ +A H+
Sbjct: 970 PDGKQ--LASSSSDTTIKLWNST--TGE-LQQT-------FKGHDLWIRAVAFSPDGKHL 1017
Query: 163 VWSASEDGTLRQHD 176
V S S+D T++ D
Sbjct: 1018 V-SGSDDNTIKLWD 1030
Score = 57 (25.1 bits), Expect = 0.00071, Sum P(3) = 0.00071
Identities = 18/63 (28%), Positives = 31/63 (49%)
Query: 611 TVIDMKQRYVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEA 670
T +++Q + GH I+ +F G ++ SGSDD +W+ T L + L D +
Sbjct: 990 TTGELQQTFKGH---DLWIRAVAF-SPDGKHLVSGSDDNTIKLWDLATSEL-QQSLEDHS 1044
Query: 671 GNV 673
+V
Sbjct: 1045 RSV 1047
Score = 56 (24.8 bits), Expect = 0.00015, Sum P(3) = 0.00015
Identities = 18/58 (31%), Positives = 29/58 (50%)
Query: 276 GRSSLHLTHVTFSPNGEEVLLSYSGEHVYLMDVNHAGGRAMRYTVGDASKIMS--FTP 331
GRS + V FSP+G+++ Y + L D A G ++ G + +I S F+P
Sbjct: 1126 GRSDW-VDSVAFSPDGKQLASGYYDSTIKLWD--SATGELLQTLEGHSDRIQSVVFSP 1180
Score = 56 (24.8 bits), Expect = 0.00089, Sum P(3) = 0.00089
Identities = 16/54 (29%), Positives = 26/54 (48%)
Query: 614 DMKQRYVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLG 667
++ Q GH +D Q+ G +ASGS D +W+ TG L+++ G
Sbjct: 1161 ELLQTLEGH----SDRIQSVVFSPDGKLLASGSYDQTAKLWDPATGELLQIFEG 1210
Score = 55 (24.4 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 13/39 (33%), Positives = 20/39 (51%)
Query: 629 IKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLG 667
+K +F G +ASGS+ +W TG L++ L G
Sbjct: 921 VKSVAF-SPDGKKLASGSEKNTVKLWNPATGELLQTLEG 958
Score = 48 (22.0 bits), Expect = 0.00095, Sum P(2) = 0.00095
Identities = 16/63 (25%), Positives = 26/63 (41%)
Query: 607 YQPETVIDMKQRYVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLL 666
+ P T ++ Q GH ++ +F G +AS S D +W TG L +
Sbjct: 945 WNPATG-ELLQTLEGHSQ---SVRSVAF-SPDGKQLASSSSDTTIKLWNSTTGELQQTFK 999
Query: 667 GDE 669
G +
Sbjct: 1000 GHD 1002
Score = 45 (20.9 bits), Expect = 0.00015, Sum P(3) = 0.00015
Identities = 21/72 (29%), Positives = 34/72 (47%)
Query: 607 YQPETVIDMKQRYVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLL 666
+ P T ++ Q + GH ++ +F G +AS S +W+ TG L++ L
Sbjct: 1197 WDPATG-ELLQIFEGHSKW---VESVAF-SPDGKLLASSSYGETIKLWDPVTGELLQTLN 1251
Query: 667 G-DE-AGNVISS 676
DE AG+V S
Sbjct: 1252 DPDESAGSVAFS 1263
Score = 40 (19.1 bits), Expect = 0.00045, Sum P(3) = 0.00045
Identities = 7/15 (46%), Positives = 10/15 (66%)
Query: 653 IWEKQTGRLIKMLLG 667
IW+ TG L++ L G
Sbjct: 1279 IWDPATGELLQALKG 1293
Score = 37 (18.1 bits), Expect = 0.00071, Sum P(3) = 0.00071
Identities = 11/34 (32%), Positives = 18/34 (52%)
Query: 272 LSEHGRSSLHLTHVTFSPNGEEVLLSYSGEHVYL 305
L H +S + V FSP+G+++ S S + L
Sbjct: 956 LEGHSQS---VRSVAFSPDGKQLASSSSDTTIKL 986
>ASPGD|ASPL0000017699 [details] [associations]
symbol:AN8187 species:162425 "Emericella nidulans"
[GO:0000778 "condensed nuclear chromosome kinetochore"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0000790
"nuclear chromatin" evidence=IEA] [GO:0003674 "molecular_function"
evidence=ND] [GO:0000070 "mitotic sister chromatid segregation"
evidence=IEA] [GO:0006995 "cellular response to nitrogen
starvation" evidence=IEA] [GO:0034501 "protein localization to
kinetochore" evidence=IEA] [GO:0031055 "chromatin remodeling at
centromere" evidence=IEA] [GO:0070317 "negative regulation of G0 to
G1 transition" evidence=IEA] [GO:0016575 "histone deacetylation"
evidence=IEA] [GO:0031066 "regulation of histone deacetylation at
centromere" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001302 OMA:CQPDLRL InterPro:IPR022052
Pfam:PF12265 EnsemblFungi:CADANIAT00004230 Uniprot:C8V748
Length = 411
Score = 125 (49.1 bits), Expect = 0.00015, P = 0.00015
Identities = 40/135 (29%), Positives = 71/135 (52%)
Query: 47 EG-HQGCVNAISWNSKG-SLLISGSDDTHINVWSYSSRKL-LHSIETGHSANVFCTKFVP 103
EG H+ +NAI++N ++L +GS D I +W + K LH++E H+ +V + P
Sbjct: 257 EGQHRDAINAIAFNPAAETVLATGSADKTIGLWDLRNLKTKLHTLEN-HTDSVTSISWHP 315
Query: 104 ETSDELVVSGAG-DAEVRLFNLSRFSGRGLDDNAIT--PSALYQC--HTRRVKKLAVEVG 158
+E V++ A D ++ ++LSR ++A P L+ HT R+ + +
Sbjct: 316 --FEEAVLASASYDRKIMFWDLSRAGEEQTPEDAQDGPPELLFMHGGHTNRISDFSWNLN 373
Query: 159 NPHVVWSASEDGTLR 173
+P V+ SA+ED L+
Sbjct: 374 DPWVLCSAAEDNLLQ 388
>UNIPROTKB|D6RFX4 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9606 "Homo sapiens" [GO:0008200 "ion channel
inhibitor activity" evidence=IEA] [GO:0015935 "small ribosomal
subunit" evidence=IEA] [GO:0017148 "negative regulation of
translation" evidence=IEA] [GO:0030425 "dendrite" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0090003
"regulation of establishment of protein localization to plasma
membrane" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0017148 GO:GO:0043025 GO:GO:0030425
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008200
HOGENOM:HOG000091643 ChiTaRS:GNB2L1 HGNC:HGNC:4399 GO:GO:0015935
EMBL:AC008443 IPI:IPI00966041 ProteinModelPortal:D6RFX4 SMR:D6RFX4
Ensembl:ENST00000507000 UCSC:uc010jls.3 ArrayExpress:D6RFX4
Bgee:D6RFX4 Uniprot:D6RFX4
Length = 194
Score = 102 (41.0 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 24/82 (29%), Positives = 43/82 (52%)
Query: 44 RELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVP 103
R GH V +++++S ++SGS D I +W+ + HS V C +F P
Sbjct: 58 RRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSP 117
Query: 104 ETSDELVVSGAGDAEVRLFNLS 125
+S+ ++VS D V+++NL+
Sbjct: 118 NSSNPIIVSCGWDKLVKVWNLA 139
Score = 55 (24.4 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 14/55 (25%), Positives = 24/55 (43%)
Query: 615 MKQRYVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDE 669
+K ++GH T + G ASG DG+ +W+ G+ + L G +
Sbjct: 143 LKTNHIGH----TGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGD 193
>ZFIN|ZDB-GENE-040116-3 [details] [associations]
symbol:pafah1b1b "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit b" species:7955 "Danio
rerio" [GO:0040023 "establishment of nucleus localization"
evidence=IMP] [GO:0045494 "photoreceptor cell maintenance"
evidence=IMP] [GO:0045176 "apical protein localization"
evidence=IMP] [GO:0048854 "brain morphogenesis" evidence=IGI;IMP]
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0006810 "transport"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-3
GO:GO:0005737 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005815 GO:GO:0045494 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 GO:GO:0040023 GO:GO:0048854
GO:GO:0045176 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:DQ141216 EMBL:BC044530 IPI:IPI00500561 RefSeq:NP_958503.1
UniGene:Dr.79815 ProteinModelPortal:Q803D2 SMR:Q803D2 STRING:Q803D2
PRIDE:Q803D2 Ensembl:ENSDART00000031470 GeneID:394247
KEGG:dre:394247 CTD:394247 InParanoid:Q07DR2 NextBio:20815156
Bgee:Q803D2 Uniprot:Q803D2
Length = 410
Score = 114 (45.2 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 38/156 (24%), Positives = 71/156 (45%)
Query: 37 VRRLSQERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANV 96
+ R ++ L GH+ V + ++ SL++S S+D I VW Y + +++ GH+ +V
Sbjct: 95 IPRPPEKYALSGHRSPVTRVIFHPVFSLMVSASEDATIKVWDYEAGDFERTLK-GHTDSV 153
Query: 97 FCTKFVPETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVE 156
F + + +L+ S + D ++L++ F I H V +A+
Sbjct: 154 QDISF--DQTGKLLASCSADMTIKLWDFQGFE-------CIRTM---HGHDHNVSSVAIM 201
Query: 157 VGNPHVVWSASEDGTLRQHDFRQGSSCPPAGSSHQE 192
H+V SAS D T++ + G C + H+E
Sbjct: 202 PNGDHIV-SASRDKTMKMWEVATGY-CVKTFTGHRE 235
Score = 55 (24.4 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 11/34 (32%), Positives = 19/34 (55%)
Query: 636 GQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDE 669
G+ G ++ SGS D +W+ TG + L+G +
Sbjct: 305 GKPGPFLLSGSRDKTIKMWDISTGMCLMTLVGHD 338
>POMBASE|SPAC4D7.03 [details] [associations]
symbol:pop2 "F-box/WD repeat protein Pop2" species:4896
"Schizosaccharomyces pombe" [GO:0005635 "nuclear envelope"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0007346 "regulation of mitotic cell cycle" evidence=IC]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IDA]
[GO:0030674 "protein binding, bridging" evidence=IPI] [GO:0032876
"negative regulation of DNA endoreduplication" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
PomBase:SPAC4D7.03 GO:GO:0007346 GO:GO:0005737 GO:GO:0005635
EMBL:CU329670 GenomeReviews:CU329670_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0006511
GO:GO:0019005 GO:GO:0032876 KO:K03361 OrthoDB:EOG4B2X5M
EMBL:AF038867 EMBL:AF064515 PIR:T43557 RefSeq:NP_594956.1
ProteinModelPortal:O14170 IntAct:O14170 STRING:O14170
EnsemblFungi:SPAC4D7.03.1 GeneID:2543514 KEGG:spo:SPAC4D7.03
OMA:RIANMEC NextBio:20804524 Uniprot:O14170
Length = 703
Score = 118 (46.6 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 27/80 (33%), Positives = 46/80 (57%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPET 105
L GH V IS G +L+SGS D+ I +W S+ + L+ + GHS ++ + PE
Sbjct: 503 LIGHTDSVRTIS--GYGDILVSGSYDSSIRIWRVSTGECLYHLR-GHSLRIYSVLYEPER 559
Query: 106 SDELVVSGAGDAEVRLFNLS 125
+ + +SG+ D +R+++LS
Sbjct: 560 N--ICISGSMDKSIRVWDLS 577
Score = 57 (25.1 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 12/27 (44%), Positives = 19/27 (70%)
Query: 642 IASGSDDGRWFIWEKQTGRLIKMLLGD 668
I SG+D G +W+ +TG+L++ LL D
Sbjct: 642 IISGND-GSVKLWDVRTGKLLRFLLTD 667
>UNIPROTKB|Q9PTR5 [details] [associations]
symbol:PAFAH1B1 "Lissencephaly-1 homolog" species:9031
"Gallus gallus" [GO:0007067 "mitosis" evidence=IEA] [GO:0051301
"cell division" evidence=IEA] [GO:0000132 "establishment of mitotic
spindle orientation" evidence=IEA] [GO:0000235 "astral microtubule"
evidence=IEA] [GO:0000776 "kinetochore" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0001675 "acrosome
assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005938 "cell
cortex" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0007405 "neuroblast proliferation" evidence=IEA]
[GO:0007611 "learning or memory" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] [GO:0008090 "retrograde axon
cargo transport" evidence=IEA] [GO:0008344 "adult locomotory
behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0031023 "microtubule organizing center organization"
evidence=IEA] [GO:0031252 "cell leading edge" evidence=IEA]
[GO:0031512 "motile primary cilium" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0036035
"osteoclast development" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0045502 "dynein
binding" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0048854 "brain morphogenesis"
evidence=IEA] [GO:0050885 "neuromuscular process controlling
balance" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051219 "phosphoprotein binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005938
GO:GO:0000132 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0005875 GO:GO:0007399 GO:GO:0031252 GO:GO:0030154
GO:GO:0000776 GO:GO:0051301 GO:GO:0016477 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 EMBL:AF113946 IPI:IPI00596826
RefSeq:NP_989655.1 UniGene:Gga.11892 ProteinModelPortal:Q9PTR5
SMR:Q9PTR5 STRING:Q9PTR5 PRIDE:Q9PTR5 Ensembl:ENSGALT00000009368
GeneID:374224 KEGG:gga:374224 InParanoid:Q9PTR5 NextBio:20813726
GO:GO:0051081 Uniprot:Q9PTR5
Length = 410
Score = 112 (44.5 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 37/156 (23%), Positives = 72/156 (46%)
Query: 37 VRRLSQERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANV 96
+ R ++ L GH+ V + ++ S+++S S+D I VW Y + +++ GH+ +V
Sbjct: 95 IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLK-GHTDSV 153
Query: 97 FCTKFVPETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVE 156
F + + +L+ S + D ++L++ F I H V +A+
Sbjct: 154 QDISF--DHTGKLLASCSADMTIKLWDFQGFE-------CIRTM---HGHDHNVSSVAIM 201
Query: 157 VGNPHVVWSASEDGTLRQHDFRQGSSCPPAGSSHQE 192
H+V SAS D T++ + + G C + H+E
Sbjct: 202 PNGDHIV-SASRDKTIKMWEVQTGY-CVKTFTGHRE 235
Score = 57 (25.1 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 13/44 (29%), Positives = 25/44 (56%)
Query: 626 GTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDE 669
G++ K++ G+ G ++ SGS D +W+ TG + L+G +
Sbjct: 298 GSETKKS---GKPGPFLLSGSRDKTIKMWDISTGMCLMTLVGHD 338
>UNIPROTKB|H0YEI6 [details] [associations]
symbol:WDTC1 "WD and tetratricopeptide repeats protein 1"
species:9606 "Homo sapiens" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0001701 "in utero embryonic development" evidence=IEA]
[GO:0004857 "enzyme inhibitor activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0006006 "glucose metabolic process" evidence=IEA] [GO:0008361
"regulation of cell size" evidence=IEA] [GO:0032869 "cellular
response to insulin stimulus" evidence=IEA] [GO:0035264
"multicellular organism growth" evidence=IEA] [GO:0042393 "histone
binding" evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0045717 "negative regulation of fatty acid
biosynthetic process" evidence=IEA] [GO:0055082 "cellular chemical
homeostasis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005829 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 GO:GO:0032869 GO:GO:0004857 GO:GO:0001701
GO:GO:0006006 GO:GO:0008361 GO:GO:0000122 GO:GO:0045717
GO:GO:0035264 EMBL:AL663123 EMBL:AL590640 HGNC:HGNC:29175
ChiTaRS:WDTC1 GO:GO:0055082 ProteinModelPortal:H0YEI6
Ensembl:ENST00000472249 Bgee:H0YEI6 Uniprot:H0YEI6
Length = 125
Score = 102 (41.0 bits), Expect = 0.00018, P = 0.00018
Identities = 18/29 (62%), Positives = 24/29 (82%)
Query: 642 IASGSDDGRWFIWEKQTGRLIKMLLGDEA 670
I SGSDDG +FIWEK+T L+++L GDE+
Sbjct: 1 IVSGSDDGSFFIWEKETTNLVRVLQGDES 29
>UNIPROTKB|F1SS88 [details] [associations]
symbol:WDR16 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043231 "intracellular membrane-bounded organelle"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0043231 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
GeneTree:ENSGT00620000087755 EMBL:CU929537
Ensembl:ENSSSCT00000019583 Uniprot:F1SS88
Length = 123
Score = 102 (41.0 bits), Expect = 0.00018, P = 0.00018
Identities = 22/77 (28%), Positives = 40/77 (51%)
Query: 44 RELEGH-QGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFV 102
REL+G G +N + +G ++G +D + VW Y+ ++ H + GHS N+ +
Sbjct: 41 RELDGSLSGSINGMDITPEGVHFVTGGNDHLVKVWDYNEGEVTH-VGVGHSGNITRVRIS 99
Query: 103 PETSDELVVSGAGDAEV 119
P +E +VS + D +
Sbjct: 100 P--GNEYIVSVSADGAI 114
>ZFIN|ZDB-GENE-040426-978 [details] [associations]
symbol:snrnp40 "small nuclear ribonucleoprotein 40
(U5)" species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-040426-978 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003676 GO:GO:0030529
HSSP:P16649 HOGENOM:HOG000091644 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 CTD:9410 HOVERGEN:HBG105197
OrthoDB:EOG4JM7Q0 EMBL:CU207343 EMBL:BC051783 IPI:IPI00506401
RefSeq:NP_956616.1 UniGene:Dr.133508 STRING:Q7ZTY9
Ensembl:ENSDART00000038230 GeneID:393292 KEGG:dre:393292
InParanoid:Q7ZTY9 NextBio:20814348 Uniprot:Q7ZTY9
Length = 347
Score = 104 (41.7 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 25/82 (30%), Positives = 45/82 (54%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANV-FCTKFVPE 104
L+GH G V + +N+ GSLL S S D + VW + + + ++ GH++ V C F
Sbjct: 95 LKGHSGAVMELHYNTDGSLLFSASTDKTVCVWDSETGERVKRLK-GHTSFVNSC--FPAR 151
Query: 105 TSDELVVSGAGDAEVRLFNLSR 126
+L +G+ D V+L+++ +
Sbjct: 152 RGPQLACTGSDDGTVKLWDIRK 173
Score = 63 (27.2 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 23/69 (33%), Positives = 36/69 (52%)
Query: 606 PYQP-ETVIDMKQRYVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKM 664
P+ P E + + Q V H N ++ + S+ G IA+GS D +IW+ T R++
Sbjct: 256 PFAPKERCVKIFQGNV-H-NFEKNLLRCSWSAD-GSKIAAGSADRFVYIWDTTTRRIVYK 312
Query: 665 LLGDEAGNV 673
L G AG+V
Sbjct: 313 LPG-HAGSV 320
>TAIR|locus:2176085 [details] [associations]
symbol:AT5G64730 "AT5G64730" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002688 GenomeReviews:BA000015_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GO:GO:0080008 KO:K13124 OMA:CKQGAVR EMBL:AY046038
EMBL:AY113956 IPI:IPI00540873 RefSeq:NP_568993.1 UniGene:At.9776
ProteinModelPortal:Q94AH2 SMR:Q94AH2 PaxDb:Q94AH2 PRIDE:Q94AH2
EnsemblPlants:AT5G64730.1 GeneID:836594 KEGG:ath:AT5G64730
TAIR:At5g64730 InParanoid:Q94AH2 PhylomeDB:Q94AH2
ProtClustDB:CLSN2690079 ArrayExpress:Q94AH2 Genevestigator:Q94AH2
Uniprot:Q94AH2
Length = 299
Score = 110 (43.8 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 32/98 (32%), Positives = 47/98 (47%)
Query: 44 RELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKF-- 101
R+ GH G VNA+ +N S+++S D + VW S HS+E + F
Sbjct: 96 RKFRGHDGEVNAVKFNDSSSVVVSAGFDRSLRVWDCRS----HSVEPVQIIDTFLDTVMS 151
Query: 102 VPETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITP 139
V T E ++ G+ D VR F++ R GR + DN P
Sbjct: 152 VVLTKTE-IIGGSVDGTVRTFDM-RI-GREMSDNLGQP 186
Score = 54 (24.1 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 13/45 (28%), Positives = 20/45 (44%)
Query: 611 TVIDMKQRYVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWE 655
T ++ Q Y GH + K L ++ GS+DG F W+
Sbjct: 214 TTGELLQVYKGH--ISKSFKTDCCLTNSDAHVIGGSEDGLVFFWD 256
>FB|FBgn0033557 [details] [associations]
symbol:CG12325 species:7227 "Drosophila melanogaster"
[GO:0022008 "neurogenesis" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:AE013599 GO:GO:0022008
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR011047
SUPFAM:SSF50998 GeneTree:ENSGT00550000074981 KO:K14558 OMA:VWQCDTP
InterPro:IPR027145 InterPro:IPR007148 PANTHER:PTHR19858
Pfam:PF04003 EMBL:BT016114 RefSeq:NP_610618.1 UniGene:Dm.12871
SMR:Q5U0X8 STRING:Q5U0X8 EnsemblMetazoa:FBtr0088227 GeneID:36144
KEGG:dme:Dmel_CG12325 UCSC:CG12325-RA FlyBase:FBgn0033557
InParanoid:Q5U0X8 OrthoDB:EOG4SN03M GenomeRNAi:36144 NextBio:797070
Uniprot:Q5U0X8
Length = 949
Score = 96 (38.9 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 25/73 (34%), Positives = 40/73 (54%)
Query: 52 CVNAISWNSKGSLLISGSDDTH-INVWSYSSRKLLHSIETGHSANVFCTKFVPETSDELV 110
CV A+ ++ G L+++G D I +WS + KLL I +GH V F P + +
Sbjct: 483 CV-AVDYS--GELVVAGGQDVFDIFLWSVKTGKLLEII-SGHEGPVVSIAFSPVATSSTL 538
Query: 111 VSGAGDAEVRLFN 123
VSG+ D V+++N
Sbjct: 539 VSGSWDKTVKIWN 551
Score = 82 (33.9 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 52/217 (23%), Positives = 85/217 (39%)
Query: 282 LTHVTFSPNGEEVLLSYSGEHVYLMDVNHAGGRAMRYTVGDASKIMSFTPTLNGLELQPP 341
+T+VTFSP+GEE+ ++ ++ + D+ AG D S T + +
Sbjct: 568 VTNVTFSPSGEEIAVATLSGNITIFDIKSAGQVTTIEGRNDLSAGRLETDIITARK-NAQ 626
Query: 342 IHDFLQTNIRVRGEVATGLGK-CRMLVEIARNSLEEGKHPY---YGIEACNEVLEG-HLS 396
+ F GE GK + + R ++ K + ++ N+ + HLS
Sbjct: 627 ANYFSTIEYSADGECILAAGKSANICIYHVREAILLKKFEITQNHSLDGLNDFISRKHLS 686
Query: 397 GIGPML----RHECLCIRAALLLKRKWKNDAQMAIRDCYNARRIDSSSFR--AHLYMSEA 450
G M R E R A+ L + D M+ R R+ S F + +
Sbjct: 687 EFGNMALVEEREELEGGRVAIRLPGVQRGD--MSSRRFQQEVRVFSVKFSPTGQAFAAAG 744
Query: 451 LEQLCKYKEALDFAIAAQCLDPSNSVMAEKV-ENIKK 486
E LC Y ALD + D S V + V E++K+
Sbjct: 745 TEGLCIY--ALDKGVVFDPFDLSLEVTPKAVHESLKQ 779
>POMBASE|SPBC1306.02 [details] [associations]
symbol:rtt10 "WD repeat protein, human WDR6 family,
involved in endocytic recycling" species:4896 "Schizosaccharomyces
pombe" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=IDA] [GO:0005768 "endosome" evidence=ISO]
[GO:0005829 "cytosol" evidence=IDA] [GO:0008033 "tRNA processing"
evidence=IEA] [GO:0032456 "endocytic recycling" evidence=ISO]
[GO:0043234 "protein complex" evidence=NAS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPBC1306.02 GO:GO:0005829
GO:GO:0005634 GO:GO:0043234 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 EMBL:CU329671 eggNOG:COG2319 GO:GO:0032456
PIR:T50309 RefSeq:NP_595473.1 ProteinModelPortal:Q9USZ0
EnsemblFungi:SPBC1306.02.1 GeneID:2539918 KEGG:spo:SPBC1306.02
OMA:CGGGHRC OrthoDB:EOG4PK5H3 NextBio:20801061 Uniprot:Q9USZ0
Length = 984
Score = 130 (50.8 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 37/140 (26%), Positives = 67/140 (47%)
Query: 40 LSQERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCT 99
+S + L GH+G + ++S G L S S+D + +WS S L + GHSA V+
Sbjct: 184 VSIDTYLVGHEGACFDLKFSSDGRYLCSVSEDRTLRLWSIESSPFLIATGFGHSARVWRC 243
Query: 100 KFVPETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHT-RRVKKLAVEVG 158
F+P + + + D +RL+ + D +T + Y H + + L V
Sbjct: 244 VFLPNKE---IATVSEDLTLRLWTWN--------DKTLTNTYTYTGHRGKHIWSLVVSSA 292
Query: 159 NPHVVWSASEDGTLRQHDFR 178
NP ++++ DG++R D++
Sbjct: 293 NP-IIYTGGNDGSVRSWDYK 311
Score = 47 (21.6 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 13/40 (32%), Positives = 22/40 (55%)
Query: 626 GTDIKQASFLGQRGDYIASGSDDGRWFIWEKQT-GRLIKM 664
G +I+ F GD + SGS+D + + E Q+ G +I +
Sbjct: 652 GREIRAMDF-NPSGDLLLSGSEDTKVTLLEFQSNGNIIPL 690
>UNIPROTKB|O42249 [details] [associations]
symbol:gnb2l1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:8128 "Oreochromis niloticus" [GO:0030178
"negative regulation of Wnt receptor signaling pathway"
evidence=ISS] [GO:0032880 "regulation of protein localization"
evidence=ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:2000114 "regulation of establishment of cell
polarity" evidence=ISS] [GO:2000543 "positive regulation of
gastrulation" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0032880 GO:GO:0030178 GO:GO:2000114
GO:GO:0051302 GO:GO:2000543 HOVERGEN:HBG000277 EMBL:AF025331
UniGene:Oni.25 ProteinModelPortal:O42249 SMR:O42249 PRIDE:O42249
Uniprot:O42249
Length = 317
Score = 104 (41.7 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 24/83 (28%), Positives = 48/83 (57%)
Query: 44 RELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIET-GHSANVFCTKFV 102
R GH V ++++++ ++SGS D I +W+ + ++I+ GH+ V C +F
Sbjct: 99 RRFVGHTKDVLSVAFSADNRQIVSGSRDKTIKLWN-TLGVCKYTIQDEGHTEWVSCVRFS 157
Query: 103 PETSDELVVSGAGDAEVRLFNLS 125
P +S+ ++VS D V+++NL+
Sbjct: 158 PNSSNPIIVSCGWDKMVKVWNLA 180
Score = 61 (26.5 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 16/63 (25%), Positives = 31/63 (49%)
Query: 615 MKQRYVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAGNVI 674
+K ++GH T + G ASG DG+ +W+ G+ + L ++G+VI
Sbjct: 184 LKTNHIGH----TGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTL---DSGDVI 236
Query: 675 SSM 677
+++
Sbjct: 237 NAL 239
>DICTYBASE|DDB_G0289711 [details] [associations]
symbol:morg1 "mitogen-activated protein kinase
organizer 1" species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005737 "cytoplasm" evidence=IEA;ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0289711 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR EMBL:AAFI02000148 HSSP:P16649 KO:K13124
RefSeq:XP_636074.1 ProteinModelPortal:Q54H44
EnsemblProtists:DDB0233741 GeneID:8627284 KEGG:ddi:DDB_G0289711
OMA:CKQGAVR Uniprot:Q54H44
Length = 325
Score = 98 (39.6 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 35/146 (23%), Positives = 62/146 (42%)
Query: 39 RLSQERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFC 98
++S + L H G V + +NS G +SGS D I +++ S ++HS E H +
Sbjct: 3 KISCNKVLSNHSGSVTVVKYNSDGGYCLSGSSDKSIKLYNVSKGSMIHSFEE-HGYGI-- 59
Query: 99 TKFVPETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVEVG 158
+ TSD + AE +L+ SG+ + H + + V +
Sbjct: 60 -GDLVSTSDNKQLFSC--AEKQLYQWDIASGQVI-------RRFQNAHNDTITSVCVNLD 109
Query: 159 NPHVVWSASEDGTLRQHDFRQGSSCP 184
+ +++S S D ++ D R S P
Sbjct: 110 ST-LLFSGSSDRLVKAWDLRTKSINP 134
Score = 67 (28.6 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 19/62 (30%), Positives = 31/62 (50%)
Query: 617 QRYVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAGNVISS 676
+ Y GH N I S I SGS+D ++I+E +G+L+ L G N+I+
Sbjct: 244 KEYKGHKNKVYKINSCSNFDD--SLIISGSEDNDFYIYELLSGKLLSKLSGHS--NIITH 299
Query: 677 ME 678
++
Sbjct: 300 VD 301
>UNIPROTKB|Q5ZIU8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0000922 "spindle
pole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 HOGENOM:HOG000008039
GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845 EMBL:DQ410670
EMBL:AJ720686 IPI:IPI00822740 RefSeq:NP_001025730.1
UniGene:Gga.7972 ProteinModelPortal:Q5ZIU8 GeneID:415631
KEGG:gga:415631 CTD:10300 HOVERGEN:HBG052294 NextBio:20819203
Uniprot:Q5ZIU8
Length = 657
Score = 125 (49.1 bits), Expect = 0.00030, P = 0.00030
Identities = 40/137 (29%), Positives = 69/137 (50%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPET 105
L GH + ++ ++K L+++GS I VW + K+L ++ GH AN+ F P
Sbjct: 59 LTGHTTPIESLQISAKEELIVAGSQSGSIRVWDLEAAKILRTL-LGHKANICSLDFHPYG 117
Query: 106 SDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVEVGNPHVVW- 164
S V SG+ D +++L+++ R +G I Y+ HT+ V+ L +P W
Sbjct: 118 S--FVASGSLDTDIKLWDVRR---KG----CIFK---YKSHTQAVRCLRF---SPDGKWL 162
Query: 165 -SASEDGTLRQHDFRQG 180
SA++D T++ D G
Sbjct: 163 ASAADDHTVKLWDLTAG 179
>ZFIN|ZDB-GENE-040718-126 [details] [associations]
symbol:wdr83 "WD repeat domain containing 83"
species:7955 "Danio rerio" [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-040718-126 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000091642
EMBL:BC076138 IPI:IPI00510406 RefSeq:NP_001002429.1
UniGene:Dr.80944 ProteinModelPortal:Q6DH44 STRING:Q6DH44
PRIDE:Q6DH44 GeneID:436702 KEGG:dre:436702 CTD:84292
HOVERGEN:HBG105288 InParanoid:Q6DH44 KO:K13124 OrthoDB:EOG4ZCT4V
NextBio:20831145 ArrayExpress:Q6DH44 Uniprot:Q6DH44
Length = 315
Score = 78 (32.5 bits), Expect = 0.00030, Sum P(3) = 0.00030
Identities = 17/53 (32%), Positives = 29/53 (54%)
Query: 44 RELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANV 96
R ++ QG V A+ +N+ G+ L++ D + +WS S LL + +GH V
Sbjct: 19 RTVDCQQGAVRAVRFNADGNYLLTCGSDKSLKLWSVSRGTLLKTY-SGHGYEV 70
Score = 64 (27.6 bits), Expect = 0.00030, Sum P(3) = 0.00030
Identities = 38/110 (34%), Positives = 43/110 (39%)
Query: 200 LRCGAKRSLADPPKQTLSLKSCDISSTR--PHLLLVGGSDAFARLYDRRMLPPLTSCQKR 257
+RC RS P Q L ISS + H LL G D R YD RM
Sbjct: 133 VRCWDTRSRRMEPIQILDESQDGISSLKVSEHELLTGSVDGRVRRYDLRM--GQLQVDYI 190
Query: 258 MSPPPCVNYFCPMHLSEHGR----SSLHLTHVTFSPNGEEVLLSYSGEHV 303
SP CV C S G+ SSL T + E+L YSG HV
Sbjct: 191 GSPITCV---C---FSRDGQCTLSSSLDSTVRLLDKSTGEMLGEYSG-HV 233
Score = 62 (26.9 bits), Expect = 0.00030, Sum P(3) = 0.00030
Identities = 17/55 (30%), Positives = 27/55 (49%)
Query: 614 DMKQRYVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRL-IKMLLG 667
+M Y GH N G K L + ++ S S+DG + W+ G L +K+ +G
Sbjct: 224 EMLGEYSGHVNKG--YKLDCCLTDKDTHVLSCSEDGHVYYWDLVEGSLTLKLPVG 276
>UNIPROTKB|E1BQV9 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AADN02065753 EMBL:AADN02065752 IPI:IPI00594543
ProteinModelPortal:E1BQV9 Ensembl:ENSGALT00000001552
ArrayExpress:E1BQV9 Uniprot:E1BQV9
Length = 660
Score = 125 (49.1 bits), Expect = 0.00030, P = 0.00030
Identities = 40/137 (29%), Positives = 69/137 (50%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPET 105
L GH + ++ ++K L+++GS I VW + K+L ++ GH AN+ F P
Sbjct: 58 LTGHTTPIESLQISAKEELIVAGSQSGSIRVWDLEAAKILRTL-LGHKANICSLDFHPYG 116
Query: 106 SDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVEVGNPHVVW- 164
S V SG+ D +++L+++ R +G I Y+ HT+ V+ L +P W
Sbjct: 117 S--FVASGSLDTDIKLWDVRR---KG----CIFK---YKSHTQAVRCLRF---SPDGKWL 161
Query: 165 -SASEDGTLRQHDFRQG 180
SA++D T++ D G
Sbjct: 162 ASAADDHTVKLWDLTAG 178
>UNIPROTKB|E3W9A3 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0000922
"spindle pole" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=IEA]
[GO:0008568 "microtubule-severing ATPase activity" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0031117 "positive regulation
of microtubule depolymerization" evidence=IEA] [GO:0045502 "dynein
binding" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005886 GO:GO:0005813
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0008568 GO:GO:0051013 GO:GO:0000922
GeneTree:ENSGT00700000104017 GO:GO:0007026 GO:GO:0008352
PANTHER:PTHR19845 IPI:IPI00822740 OMA:NAISRTP GO:GO:0031117
EMBL:AADN02065753 EMBL:AADN02065752 ProteinModelPortal:E3W9A3
Ensembl:ENSGALT00000040450 ArrayExpress:E3W9A3 Uniprot:E3W9A3
Length = 661
Score = 125 (49.1 bits), Expect = 0.00030, P = 0.00030
Identities = 40/137 (29%), Positives = 69/137 (50%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPET 105
L GH + ++ ++K L+++GS I VW + K+L ++ GH AN+ F P
Sbjct: 59 LTGHTTPIESLQISAKEELIVAGSQSGSIRVWDLEAAKILRTL-LGHKANICSLDFHPYG 117
Query: 106 SDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVEVGNPHVVW- 164
S V SG+ D +++L+++ R +G I Y+ HT+ V+ L +P W
Sbjct: 118 S--FVASGSLDTDIKLWDVRR---KG----CIFK---YKSHTQAVRCLRF---SPDGKWL 162
Query: 165 -SASEDGTLRQHDFRQG 180
SA++D T++ D G
Sbjct: 163 ASAADDHTVKLWDLTAG 179
>UNIPROTKB|F1P0F4 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AADN02065753 EMBL:AADN02065752 IPI:IPI00821846
Ensembl:ENSGALT00000040449 ArrayExpress:F1P0F4 Uniprot:F1P0F4
Length = 661
Score = 125 (49.1 bits), Expect = 0.00030, P = 0.00030
Identities = 40/137 (29%), Positives = 69/137 (50%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPET 105
L GH + ++ ++K L+++GS I VW + K+L ++ GH AN+ F P
Sbjct: 59 LTGHTTPIESLQISAKEELIVAGSQSGSIRVWDLEAAKILRTL-LGHKANICSLDFHPYG 117
Query: 106 SDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVEVGNPHVVW- 164
S V SG+ D +++L+++ R +G I Y+ HT+ V+ L +P W
Sbjct: 118 S--FVASGSLDTDIKLWDVRR---KG----CIFK---YKSHTQAVRCLRF---SPDGKWL 162
Query: 165 -SASEDGTLRQHDFRQG 180
SA++D T++ D G
Sbjct: 163 ASAADDHTVKLWDLTAG 179
>RGD|1565004 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005932 "microtubule basal body"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1565004 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OrthoDB:EOG412M5H IPI:IPI00763099
ProteinModelPortal:D4ABU4 Ensembl:ENSRNOT00000038166
UCSC:RGD:1565004 ArrayExpress:D4ABU4 Uniprot:D4ABU4
Length = 324
Score = 116 (45.9 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 27/75 (36%), Positives = 42/75 (56%)
Query: 49 HQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPETSDE 108
H V ++ + S G LL++ SDD + VWS ++ L S+ T H V C KF P+
Sbjct: 102 HTATVRSVHFCSDGQLLVTASDDKTVKVWSTHRQRFLFSL-TQHINWVRCAKFSPD--GR 158
Query: 109 LVVSGAGDAEVRLFN 123
L+VS + D V+L++
Sbjct: 159 LIVSASDDKTVKLWD 173
Score = 114 (45.2 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 35/133 (26%), Positives = 62/133 (46%)
Query: 41 SQERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTK 100
S ER +GH+ V + ++ L SGS D+ + +W + + TGH V C
Sbjct: 10 SLERHFKGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRF-TGHKDAVTCVN 68
Query: 101 FVPETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVEVGNP 160
F P S L+ SG+ D VR++ + G S +++ HT V+ + +
Sbjct: 69 FSP--SGHLLASGSRDKTVRIW-VPNVKGE---------STVFRAHTATVRSVHF-CSDG 115
Query: 161 HVVWSASEDGTLR 173
++ +AS+D T++
Sbjct: 116 QLLVTASDDKTVK 128
Score = 47 (21.6 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 11/35 (31%), Positives = 18/35 (51%)
Query: 621 GHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWE 655
GH T + +F + G+Y ASG D + +W+
Sbjct: 269 GHQGPATTV---AF-SRTGEYFASGGSDEQVMVWK 299
Score = 46 (21.3 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 14/52 (26%), Positives = 22/52 (42%)
Query: 618 RYVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDE 669
R V H + + A G+Y+ + S D I + GRL+ L G +
Sbjct: 220 RLVQHYQLHSAAVNALSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQ 271
Score = 45 (20.9 bits), Expect = 0.00048, Sum P(2) = 0.00048
Identities = 15/55 (27%), Positives = 24/55 (43%)
Query: 622 HCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKML-LGDEAGNVIS 675
+C G + F G IA+ D +W+ +T RL++ L A N +S
Sbjct: 183 YCEHGGFVTYVDF-HPSGTCIAAAGMDNTVKVWDTRTHRLVQHYQLHSAAVNALS 236
>UNIPROTKB|F1NII4 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001826 "inner cell mass cell differentiation"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GeneTree:ENSGT00690000102167 PRINTS:PR00319 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 EMBL:AADN02025808 EMBL:AADN02025807
IPI:IPI00592422 ProteinModelPortal:F1NII4
Ensembl:ENSGALT00000007475 Uniprot:F1NII4
Length = 498
Score = 123 (48.4 bits), Expect = 0.00033, P = 0.00033
Identities = 27/77 (35%), Positives = 43/77 (55%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPET 105
L GH V I+W++ LL+SGS D+ + VW ++KL + GH+ VF T + P+
Sbjct: 423 LRGHVSAVYQIAWSADSRLLVSGSSDSTLKVWDAETKKLAIDLP-GHADEVFATDWSPD- 480
Query: 106 SDELVVSGAGDAEVRLF 122
+ V SG D +R++
Sbjct: 481 -GQRVASGGKDKCLRIW 496
>UNIPROTKB|H9L3L2 [details] [associations]
symbol:LOC100859596 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006692
InterPro:IPR010714 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
Pfam:PF06957 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006886 GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030126 InterPro:IPR016391 PIRSF:PIRSF003354
GeneTree:ENSGT00600000084501 EMBL:AADN02074020 EMBL:AADN02074019
Ensembl:ENSGALT00000040760 Uniprot:H9L3L2
Length = 1134
Score = 127 (49.8 bits), Expect = 0.00036, P = 0.00036
Identities = 28/86 (32%), Positives = 49/86 (56%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIET--GHSANVFCTKFVP 103
LEGH VN +++ L++SG+DD + +W + K ++T GH NV C F P
Sbjct: 201 LEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWE-VDTCRGHYNNVSCAVFHP 259
Query: 104 ETSDELVVSGAGDAEVRLFNLSRFSG 129
EL++S + D +R++++S+ +G
Sbjct: 260 R--QELILSNSEDKSIRVWDMSKRTG 283
Score = 126 (49.4 bits), Expect = 0.00046, P = 0.00046
Identities = 30/92 (32%), Positives = 51/92 (55%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPET 105
L GH + ++ + ++S SDD I VW++ SR + + TGH+ V C +F P
Sbjct: 89 LLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQSRTCV-CVLTGHNHYVMCAQFHP-- 145
Query: 106 SDELVVSGAGDAEVRLFNLSRFSGRGLDDNAI 137
S++LVVS + D VR++++S + L A+
Sbjct: 146 SEDLVVSASLDQTVRVWDISGLRKKNLSPGAV 177
>UNIPROTKB|H9KZL3 [details] [associations]
symbol:LOC100859596 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=IEA]
[GO:0005615 "extracellular space" evidence=IEA] [GO:0030157
"pancreatic juice secretion" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR010714
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053 Pfam:PF06957
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030126 InterPro:IPR016391 PIRSF:PIRSF003354
GeneTree:ENSGT00600000084501 EMBL:AADN02074020 EMBL:AADN02074019
Ensembl:ENSGALT00000014909 OMA:ENSVLLC Uniprot:H9KZL3
Length = 1169
Score = 127 (49.8 bits), Expect = 0.00037, P = 0.00037
Identities = 28/86 (32%), Positives = 49/86 (56%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIET--GHSANVFCTKFVP 103
LEGH VN +++ L++SG+DD + +W + K ++T GH NV C F P
Sbjct: 201 LEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWE-VDTCRGHYNNVSCAVFHP 259
Query: 104 ETSDELVVSGAGDAEVRLFNLSRFSG 129
EL++S + D +R++++S+ +G
Sbjct: 260 R--QELILSNSEDKSIRVWDMSKRTG 283
Score = 126 (49.4 bits), Expect = 0.00048, P = 0.00048
Identities = 30/92 (32%), Positives = 51/92 (55%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPET 105
L GH + ++ + ++S SDD I VW++ SR + + TGH+ V C +F P
Sbjct: 89 LLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQSRTCV-CVLTGHNHYVMCAQFHP-- 145
Query: 106 SDELVVSGAGDAEVRLFNLSRFSGRGLDDNAI 137
S++LVVS + D VR++++S + L A+
Sbjct: 146 SEDLVVSASLDQTVRVWDISGLRKKNLSPGAV 177
>UNIPROTKB|Q6GMD2 [details] [associations]
symbol:wdr61 "WD repeat-containing protein 61" species:8355
"Xenopus laevis" [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0016593 "Cdc73/Paf1 complex"
evidence=ISS] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=ISS]
[GO:0035327 "transcriptionally active chromatin" evidence=ISS]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0051571
"positive regulation of histone H3-K4 methylation" evidence=ISS]
[GO:0055087 "Ski complex" evidence=ISS] [GO:0080182 "histone H3-K4
trimethylation" evidence=ISS] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0080182 GO:GO:0016593 GO:GO:0045638
GO:GO:2001162 GO:GO:0055087 CTD:80349 HOVERGEN:HBG059813 KO:K12602
EMBL:BC074136 RefSeq:NP_001086055.1 UniGene:Xl.23922
ProteinModelPortal:Q6GMD2 GeneID:444484 KEGG:xla:444484
Xenbase:XB-GENE-5751613 Uniprot:Q6GMD2
Length = 305
Score = 106 (42.4 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 25/86 (29%), Positives = 45/86 (52%)
Query: 39 RLSQERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFC 98
RL + LEGHQ V ++ + G+++ S S D HI +W S K + SI+ G + +
Sbjct: 53 RLEMQWALEGHQLGVVSVDVSPSGNIMASSSLDAHIRLWDLESGKQIRSIDAG-PVDAWS 111
Query: 99 TKFVPETSDELVVSGAGDAEVRLFNL 124
F P++ + +G+ +V +F +
Sbjct: 112 VAFSPDSQH--LATGSHVGKVNIFGV 135
Score = 56 (24.8 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 13/29 (44%), Positives = 19/29 (65%)
Query: 639 GDYIASGSDDGRWFIWEKQTGRLIKMLLG 667
G Y+ASG+ DG I++ TG+L+ L G
Sbjct: 160 GKYLASGAIDGIINIFDIATGKLLHTLEG 188
>FB|FBgn0025724 [details] [associations]
symbol:beta'Cop "beta'-coatomer protein" species:7227
"Drosophila melanogaster" [GO:0006890 "retrograde vesicle-mediated
transport, Golgi to ER" evidence=NAS] [GO:0030126 "COPI vesicle
coat" evidence=NAS] [GO:0048194 "Golgi vesicle budding"
evidence=NAS] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=NAS] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA] [GO:0010883
"regulation of lipid storage" evidence=IDA] [GO:0005795 "Golgi
stack" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
EMBL:AE014134 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005198 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006888 GO:GO:0030126 GO:GO:0010883 GO:GO:0006890
InterPro:IPR011044 SUPFAM:SSF50969 InterPro:IPR016453
PIRSF:PIRSF005567 GeneTree:ENSGT00640000091529 OMA:LRNKAFG
EMBL:AJ006523 EMBL:AJ006524 EMBL:BT023906 EMBL:AY119527
RefSeq:NP_524836.2 UniGene:Dm.2980 ProteinModelPortal:O62621
SMR:O62621 DIP:DIP-22262N MINT:MINT-1636818 STRING:O62621
PaxDb:O62621 PRIDE:O62621 EnsemblMetazoa:FBtr0080469 GeneID:45757
KEGG:dme:Dmel_CG6699 CTD:45757 FlyBase:FBgn0025724
InParanoid:O62621 OrthoDB:EOG4VHHN9 PhylomeDB:O62621
ChiTaRS:beta'Cop GenomeRNAi:45757 NextBio:838315 Bgee:O62621
GermOnline:CG6699 Uniprot:O62621
Length = 914
Score = 127 (49.8 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 27/80 (33%), Positives = 47/80 (58%)
Query: 46 LEGHQGCVNAISWNSKGS--LLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVP 103
LEGH+ VN + + G LISG+DD + +W Y ++ + ++E GH+ N+ F P
Sbjct: 181 LEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLE-GHAQNISAVCFHP 239
Query: 104 ETSDELVVSGAGDAEVRLFN 123
E +V++G+ D VR+++
Sbjct: 240 ELP--IVLTGSEDGTVRIWH 257
Score = 47 (21.6 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 12/53 (22%), Positives = 24/53 (45%)
Query: 269 PMHLSEHGRSSLHLTHVTFSPNGEEVLLSYSGEHVYLMDV---NHAGGRAMRY 318
P+ + G ++ + +PNG V++ GE++ + N A G A +
Sbjct: 344 PVATKDMGACEIYPQTIAHNPNGRFVVVCGDGEYIIYTSMALRNKAFGSAQEF 396
>SGD|S000002304 [details] [associations]
symbol:COP1 "Alpha subunit of COPI vesicle coatomer complex"
species:4932 "Saccharomyces cerevisiae" [GO:0030126 "COPI vesicle
coat" evidence=IEA;ISS;IMP] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0031410
"cytoplasmic vesicle" evidence=IEA] [GO:0006890 "retrograde
vesicle-mediated transport, Golgi to ER" evidence=IMP] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0000139 "Golgi membrane"
evidence=IEA] [GO:0030663 "COPI-coated vesicle membrane"
evidence=IEA] [GO:0043130 "ubiquitin binding" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006692
InterPro:IPR010714 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
Pfam:PF06957 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000002304 GO:GO:0006886 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:BK006938 GO:GO:0006888
GO:GO:0030126 GO:GO:0006890 GO:GO:0043130 EMBL:X97751
HOGENOM:HOG000195913 KO:K05236 InterPro:IPR016391 PIRSF:PIRSF003354
GeneTree:ENSGT00600000084501 OrthoDB:EOG40VZXP EMBL:Z46617
EMBL:X83754 EMBL:Z74193 EMBL:Z74192 PIR:S67692 RefSeq:NP_010136.1
PDB:3MKQ PDB:3MV2 PDB:3MV3 PDBsum:3MKQ PDBsum:3MV2 PDBsum:3MV3
ProteinModelPortal:P53622 SMR:P53622 DIP:DIP-2582N IntAct:P53622
MINT:MINT-422687 STRING:P53622 PaxDb:P53622 PeptideAtlas:P53622
EnsemblFungi:YDL145C GeneID:851410 KEGG:sce:YDL145C CYGD:YDL145c
OMA:YDQHNPF EvolutionaryTrace:P53622 NextBio:968591
Genevestigator:P53622 GermOnline:YDL145C Uniprot:P53622
Length = 1201
Score = 127 (49.8 bits), Expect = 0.00038, P = 0.00038
Identities = 27/80 (33%), Positives = 49/80 (61%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPET 105
L GH V + ++ + +IS SDD I +W++ +RK + + TGH+ V C +F P
Sbjct: 91 LTGHLDYVRTVFFHRELPWIISASDDQTIRIWNWQNRKEIACL-TGHNHFVMCAQFHP-- 147
Query: 106 SDELVVSGAGDAEVRLFNLS 125
+D+L+VS + D +R++++S
Sbjct: 148 TDDLIVSASLDETIRIWDIS 167
>ASPGD|ASPL0000037303 [details] [associations]
symbol:copA species:162425 "Emericella nidulans"
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0001411 "hyphal
tip" evidence=IDA] [GO:0030448 "hyphal growth" evidence=IMP]
[GO:0000280 "nuclear division" evidence=IMP] [GO:0005198
"structural molecule activity" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0030126 "COPI
vesicle coat" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0006890 "retrograde vesicle-mediated transport,
Golgi to ER" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR010714
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053 Pfam:PF06957
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001306 InterPro:IPR011047 SUPFAM:SSF50998 GO:GO:0030126
InterPro:IPR016391 PIRSF:PIRSF003354 OMA:YDQHNPF
ProteinModelPortal:C8VIU7 EnsemblFungi:CADANIAT00010053
Uniprot:C8VIU7
Length = 1205
Score = 127 (49.8 bits), Expect = 0.00038, P = 0.00038
Identities = 33/127 (25%), Positives = 67/127 (52%)
Query: 1 MENFPFHDGSI--YDMLDTRHTDTRPDVNHSLQMHSSLVRRLSQERELEGHQGCVNAISW 58
++ F HDG + D T+ ++ +++ + RR L GH V + +
Sbjct: 44 IDRFEEHDGPVRGIDFHPTQPLFVSGGDDYKIKVWNYQTRRCLFT--LNGHLDYVRTVFF 101
Query: 59 NSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPETSDELVVSGAGDAE 118
+ + ++S SDD I +W++ +R L+ ++ TGH+ V C +F P +++L+ S + D
Sbjct: 102 HPELPWILSASDDQTIRIWNWQNRSLICTM-TGHNHYVMCAQFHP--TEDLIASASLDQS 158
Query: 119 VRLFNLS 125
VR++++S
Sbjct: 159 VRIWDIS 165
>POMBASE|SPBPJ4664.04 [details] [associations]
symbol:SPBPJ4664.04 "coatomer alpha subunit
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=IDA]
[GO:0006886 "intracellular protein transport" evidence=IC]
[GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=ISO]
[GO:0006890 "retrograde vesicle-mediated transport, Golgi to ER"
evidence=ISO] [GO:0030126 "COPI vesicle coat" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006692
InterPro:IPR010714 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
Pfam:PF06957 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
PomBase:SPBPJ4664.04 GO:GO:0006886 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198
EMBL:CU329671 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006888 GO:GO:0030126 GO:GO:0006890 HSSP:P63005
HOGENOM:HOG000195913 KO:K05236 OMA:PLAADHI InterPro:IPR016391
PIRSF:PIRSF003354 RefSeq:NP_595279.1 ProteinModelPortal:Q96WV5
STRING:Q96WV5 EnsemblFungi:SPBPJ4664.04.1 GeneID:2541412
KEGG:spo:SPBPJ4664.04 OrthoDB:EOG40VZXP NextBio:20802518
Uniprot:Q96WV5
Length = 1207
Score = 127 (49.8 bits), Expect = 0.00038, P = 0.00038
Identities = 46/131 (35%), Positives = 65/131 (49%)
Query: 47 EGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANV-FCTKFVPET 105
+GH G V I+++ L +SG DD +NVW+Y SRKLL S+ GH V CT F E
Sbjct: 50 DGHDGPVRGIAFHPTQPLFVSGGDDYKVNVWNYKSRKLLFSL-CGHMDYVRVCT-FHHEY 107
Query: 106 SDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVEVGNPHVVWS 165
++S + D +R++N + R N I A+ H+ V A +V S
Sbjct: 108 P--WILSCSDDQTIRIWN---WQSR----NCI---AILTGHSHYVMCAAFHPSEDLIV-S 154
Query: 166 ASEDGTLRQHD 176
AS D T+R D
Sbjct: 155 ASLDQTVRVWD 165
>UNIPROTKB|F1PU93 [details] [associations]
symbol:COPA "Coatomer subunit alpha" species:9615 "Canis
lupus familiaris" [GO:0030126 "COPI vesicle coat" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR010714
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053 Pfam:PF06957
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030126 InterPro:IPR016391 PIRSF:PIRSF003354
GeneTree:ENSGT00600000084501 OMA:FWVLGAH EMBL:AAEX03018465
EMBL:AAEX03018466 Ensembl:ENSCAFT00000019919 Uniprot:F1PU93
Length = 1214
Score = 127 (49.8 bits), Expect = 0.00039, P = 0.00039
Identities = 28/86 (32%), Positives = 49/86 (56%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIET--GHSANVFCTKFVP 103
LEGH VN +++ L++SG+DD + +W + K ++T GH NV C F P
Sbjct: 191 LEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWE-VDTCRGHYNNVSCAVFHP 249
Query: 104 ETSDELVVSGAGDAEVRLFNLSRFSG 129
EL++S + D +R++++S+ +G
Sbjct: 250 R--QELILSNSEDKSIRVWDMSKRTG 273
Score = 126 (49.4 bits), Expect = 0.00050, P = 0.00050
Identities = 30/92 (32%), Positives = 51/92 (55%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPET 105
L GH + ++ + ++S SDD I VW++ SR + + TGH+ V C +F P
Sbjct: 79 LLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQSRTCV-CVLTGHNHYVMCAQFHP-- 135
Query: 106 SDELVVSGAGDAEVRLFNLSRFSGRGLDDNAI 137
S++LVVS + D VR++++S + L A+
Sbjct: 136 SEDLVVSASLDQTVRVWDISGLRKKNLSPGAV 167
>UNIPROTKB|Q27954 [details] [associations]
symbol:COPA "Coatomer subunit alpha" species:9913 "Bos
taurus" [GO:0005515 "protein binding" evidence=IPI] [GO:0006890
"retrograde vesicle-mediated transport, Golgi to ER" evidence=TAS]
[GO:0030126 "COPI vesicle coat" evidence=IDA] [GO:0006891
"intra-Golgi vesicle-mediated transport" evidence=TAS] [GO:0030157
"pancreatic juice secretion" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0005179 "hormone activity"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006886 GO:GO:0005615
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030157 GO:GO:0006891 GO:GO:0030126
GO:GO:0006890 HOGENOM:HOG000195913 KO:K05236 InterPro:IPR016391
PIRSF:PIRSF003354 EMBL:X96768 EMBL:BC153251 IPI:IPI00904110
RefSeq:NP_001099115.1 UniGene:Bt.76408 PDB:3MKR PDBsum:3MKR
ProteinModelPortal:Q27954 IntAct:Q27954 STRING:Q27954 PRIDE:Q27954
Ensembl:ENSBTAT00000005672 GeneID:100126041 KEGG:bta:100126041
CTD:1314 GeneTree:ENSGT00600000084501 HOVERGEN:HBG005379
EvolutionaryTrace:Q27954 NextBio:20788926 Uniprot:Q27954
Length = 1224
Score = 127 (49.8 bits), Expect = 0.00039, P = 0.00039
Identities = 28/86 (32%), Positives = 49/86 (56%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIET--GHSANVFCTKFVP 103
LEGH VN +++ L++SG+DD + +W + K ++T GH NV C F P
Sbjct: 201 LEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWE-VDTCRGHYNNVSCAVFHP 259
Query: 104 ETSDELVVSGAGDAEVRLFNLSRFSG 129
EL++S + D +R++++S+ +G
Sbjct: 260 R--QELILSNSEDKSIRVWDMSKRTG 283
Score = 126 (49.4 bits), Expect = 0.00050, P = 0.00050
Identities = 30/92 (32%), Positives = 51/92 (55%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPET 105
L GH + ++ + ++S SDD I VW++ SR + + TGH+ V C +F P
Sbjct: 89 LLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQSRTCV-CVLTGHNHYVMCAQFHP-- 145
Query: 106 SDELVVSGAGDAEVRLFNLSRFSGRGLDDNAI 137
S++LVVS + D VR++++S + L A+
Sbjct: 146 SEDLVVSASLDQTVRVWDISGLRKKNLSPGAV 177
>UNIPROTKB|F1RJX8 [details] [associations]
symbol:COPA "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030157 "pancreatic juice secretion" evidence=IEA]
[GO:0005615 "extracellular space" evidence=IEA] [GO:0030126 "COPI
vesicle coat" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006886 GO:GO:0005615
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030157 GO:GO:0030126 KO:K05236 InterPro:IPR016391
PIRSF:PIRSF003354 CTD:1314 GeneTree:ENSGT00600000084501 OMA:FWVLGAH
EMBL:CU207285 RefSeq:XP_001928742.1 UniGene:Ssc.96897
Ensembl:ENSSSCT00000006999 GeneID:100157296 KEGG:ssc:100157296
Uniprot:F1RJX8
Length = 1224
Score = 127 (49.8 bits), Expect = 0.00039, P = 0.00039
Identities = 28/86 (32%), Positives = 49/86 (56%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIET--GHSANVFCTKFVP 103
LEGH VN +++ L++SG+DD + +W + K ++T GH NV C F P
Sbjct: 201 LEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWE-VDTCRGHYNNVSCAVFHP 259
Query: 104 ETSDELVVSGAGDAEVRLFNLSRFSG 129
EL++S + D +R++++S+ +G
Sbjct: 260 R--QELILSNSEDKSIRVWDMSKRTG 283
Score = 126 (49.4 bits), Expect = 0.00050, P = 0.00050
Identities = 30/92 (32%), Positives = 51/92 (55%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPET 105
L GH + ++ + ++S SDD I VW++ SR + + TGH+ V C +F P
Sbjct: 89 LLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQSRTCV-CVLTGHNHYVMCAQFHP-- 145
Query: 106 SDELVVSGAGDAEVRLFNLSRFSGRGLDDNAI 137
S++LVVS + D VR++++S + L A+
Sbjct: 146 SEDLVVSASLDQTVRVWDISGLRKKNLSPGAV 177
>MGI|MGI:1334462 [details] [associations]
symbol:Copa "coatomer protein complex subunit alpha"
species:10090 "Mus musculus" [GO:0005179 "hormone activity"
evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0005576 "extracellular region" evidence=IEA]
[GO:0005615 "extracellular space" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA] [GO:0030126
"COPI vesicle coat" evidence=ISO] [GO:0030157 "pancreatic juice
secretion" evidence=ISO] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1334462 GO:GO:0006886
GO:GO:0005615 GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030157 GO:GO:0030126
HSSP:P63005 HOGENOM:HOG000195913 KO:K05236 InterPro:IPR016391
PIRSF:PIRSF003354 CTD:1314 GeneTree:ENSGT00600000084501
HOVERGEN:HBG005379 ChiTaRS:COPA EMBL:AC158930 EMBL:BC024070
EMBL:BC047429 IPI:IPI00229834 RefSeq:NP_034068.3 UniGene:Mm.30041
ProteinModelPortal:Q8CIE6 SMR:Q8CIE6 IntAct:Q8CIE6 STRING:Q8CIE6
PhosphoSite:Q8CIE6 PaxDb:Q8CIE6 PRIDE:Q8CIE6
Ensembl:ENSMUST00000135192 GeneID:12847 KEGG:mmu:12847
UCSC:uc007dpn.2 InParanoid:Q8CIE6 NextBio:282392 Bgee:Q8CIE6
Genevestigator:Q8CIE6 Uniprot:Q8CIE6
Length = 1224
Score = 127 (49.8 bits), Expect = 0.00039, P = 0.00039
Identities = 28/86 (32%), Positives = 49/86 (56%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIET--GHSANVFCTKFVP 103
LEGH VN +++ L++SG+DD + +W + K ++T GH NV C F P
Sbjct: 201 LEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWE-VDTCRGHYNNVSCAVFHP 259
Query: 104 ETSDELVVSGAGDAEVRLFNLSRFSG 129
EL++S + D +R++++S+ +G
Sbjct: 260 R--QELILSNSEDKSIRVWDMSKRTG 283
Score = 126 (49.4 bits), Expect = 0.00050, P = 0.00050
Identities = 30/92 (32%), Positives = 51/92 (55%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPET 105
L GH + ++ + ++S SDD I VW++ SR + + TGH+ V C +F P
Sbjct: 89 LLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQSRTCV-CVLTGHNHYVMCAQFHP-- 145
Query: 106 SDELVVSGAGDAEVRLFNLSRFSGRGLDDNAI 137
S++LVVS + D VR++++S + L A+
Sbjct: 146 SEDLVVSASLDQTVRVWDISGLRKKNLSPGAV 177
>UNIPROTKB|G3V6T1 [details] [associations]
symbol:Copa "Protein Copa" species:10116 "Rattus
norvegicus" [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0005615 "extracellular space" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030126
"COPI vesicle coat" evidence=IEA] [GO:0030157 "pancreatic juice
secretion" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1310525 GO:GO:0006886
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030126 KO:K05236 InterPro:IPR016391 PIRSF:PIRSF003354
CTD:1314 GeneTree:ENSGT00600000084501 OMA:FWVLGAH EMBL:CH473985
RefSeq:NP_001128012.1 UniGene:Rn.203109 ProteinModelPortal:G3V6T1
PRIDE:G3V6T1 Ensembl:ENSRNOT00000008518 GeneID:304978
KEGG:rno:304978 NextBio:653932 Uniprot:G3V6T1
Length = 1224
Score = 127 (49.8 bits), Expect = 0.00039, P = 0.00039
Identities = 28/86 (32%), Positives = 49/86 (56%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIET--GHSANVFCTKFVP 103
LEGH VN +++ L++SG+DD + +W + K ++T GH NV C F P
Sbjct: 201 LEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWE-VDTCRGHYNNVSCAVFHP 259
Query: 104 ETSDELVVSGAGDAEVRLFNLSRFSG 129
EL++S + D +R++++S+ +G
Sbjct: 260 R--QELILSNSEDKSIRVWDMSKRTG 283
Score = 126 (49.4 bits), Expect = 0.00050, P = 0.00050
Identities = 30/92 (32%), Positives = 51/92 (55%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPET 105
L GH + ++ + ++S SDD I VW++ SR + + TGH+ V C +F P
Sbjct: 89 LLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQSRTCV-CVLTGHNHYVMCAQFHP-- 145
Query: 106 SDELVVSGAGDAEVRLFNLSRFSGRGLDDNAI 137
S++LVVS + D VR++++S + L A+
Sbjct: 146 SEDLVVSASLDQTVRVWDISGLRKKNLSPGAV 177
>UNIPROTKB|P53621 [details] [associations]
symbol:COPA "Coatomer subunit alpha" species:9606 "Homo
sapiens" [GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0005179 "hormone activity" evidence=IEA] [GO:0030126 "COPI
vesicle coat" evidence=ISS;IDA] [GO:0005615 "extracellular space"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0030157
"pancreatic juice secretion" evidence=IDA] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006890 "retrograde vesicle-mediated transport,
Golgi to ER" evidence=TAS] [GO:0016044 "cellular membrane
organization" evidence=TAS] [GO:0048205 "COPI coating of Golgi
vesicle" evidence=TAS] Reactome:REACT_11123 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR010714
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053 Pfam:PF06957
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005829
GO:GO:0006886 GO:GO:0005615 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030157 EMBL:CH471121
Pathway_Interaction_DB:arf_3pathway GO:GO:0030126 GO:GO:0048205
GO:GO:0006890 HOGENOM:HOG000195913 KO:K05236 InterPro:IPR016391
PIRSF:PIRSF003354 CTD:1314 HOVERGEN:HBG005379 OMA:FWVLGAH
EMBL:U24105 EMBL:AL513282 EMBL:AL445230 EMBL:BC038447
IPI:IPI00295857 IPI:IPI00646493 PIR:JC4668 RefSeq:NP_001091868.1
RefSeq:NP_004362.2 UniGene:Hs.162121 UniGene:Hs.685025
ProteinModelPortal:P53621 SMR:P53621 IntAct:P53621
MINT:MINT-1144184 STRING:P53621 PhosphoSite:P53621 DMDM:205371746
PaxDb:P53621 PRIDE:P53621 Ensembl:ENST00000241704
Ensembl:ENST00000368069 GeneID:1314 KEGG:hsa:1314 UCSC:uc001fvv.4
UCSC:uc009wti.3 GeneCards:GC01M160258 HGNC:HGNC:2230 HPA:HPA028024
MIM:601924 neXtProt:NX_P53621 PharmGKB:PA26746 PhylomeDB:P53621
ChiTaRS:COPA GenomeRNAi:1314 NextBio:5373 Bgee:P53621
CleanEx:HS_COPA Genevestigator:P53621 GermOnline:ENSG00000122218
Uniprot:P53621
Length = 1224
Score = 127 (49.8 bits), Expect = 0.00039, P = 0.00039
Identities = 28/86 (32%), Positives = 49/86 (56%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIET--GHSANVFCTKFVP 103
LEGH VN +++ L++SG+DD + +W + K ++T GH NV C F P
Sbjct: 201 LEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWE-VDTCRGHYNNVSCAVFHP 259
Query: 104 ETSDELVVSGAGDAEVRLFNLSRFSG 129
EL++S + D +R++++S+ +G
Sbjct: 260 R--QELILSNSEDKSIRVWDMSKRTG 283
>DICTYBASE|DDB_G0286457 [details] [associations]
symbol:strap "putative serine-threonine kinase
receptor-associated protein" species:44689 "Dictyostelium
discoideum" [GO:0005575 "cellular_component" evidence=ND]
[GO:0030512 "negative regulation of transforming growth factor beta
receptor signaling pathway" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0286457
GenomeReviews:CM000153_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AAFI02000085 GO:GO:0030512
InterPro:IPR013979 Pfam:PF08662 KO:K13137 OMA:LWQTTVG
RefSeq:XP_637742.1 ProteinModelPortal:Q54LT8
EnsemblProtists:DDB0233062 GeneID:8625608 KEGG:ddi:DDB_G0286457
InParanoid:Q54LT8 ProtClustDB:CLSZ2430103 Uniprot:Q54LT8
Length = 293
Score = 118 (46.6 bits), Expect = 0.00046, P = 0.00046
Identities = 56/211 (26%), Positives = 89/211 (42%)
Query: 47 EGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPETS 106
EGH+G V + +NS S ++ S D + +W + + SIE H + V F +
Sbjct: 53 EGHKGAVWSSRFNSTASQALTASADYTVKLWDTLNGSEILSIE--HQSIVKTADF--SNN 108
Query: 107 DELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVEVGNPHVVWSA 166
+ VV+G + +R+F+L R +D + S HT +K V N +V S
Sbjct: 109 NSRVVTGGSEKILRIFDLER-----PNDPLLQISG----HTNTIKTATWSVHNDDIVLSG 159
Query: 167 SEDGTLRQHDFRQG---SSCPPAGSSHQEC---RNILLDLRCGAKRSLADP----PKQTL 216
D +R D R G S C + + E R L+ G + + D P +
Sbjct: 160 GLDEVIRIWDLRSGTQVSLCAKSSITSMEFSKDRRFLVTT-AGNEVTFWDAQSFYPLKVY 218
Query: 217 SLK-SCDISSTRPH--LLLVGGSDAFARLYD 244
SL + +S P + GGSD + +YD
Sbjct: 219 SLPFDVNCASLHPDNSKFIAGGSDFWVHVYD 249
>SGD|S000002549 [details] [associations]
symbol:PEX7 "Peroxisomal signal receptor for peroxisomal
matrix proteins" species:4932 "Saccharomyces cerevisiae"
[GO:0005777 "peroxisome" evidence=IEA;IDA] [GO:0005053 "peroxisome
matrix targeting signal-2 binding" evidence=IEA;IDA;IPI]
[GO:0016558 "protein import into peroxisome matrix" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0016560 "protein import
into peroxisome matrix, docking" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR025651
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000002549 GO:GO:0005829 GO:GO:0005777 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 EMBL:BK006938 EMBL:Z48179
GO:GO:0016560 EMBL:Z54139 HOGENOM:HOG000204332 KO:K13341
GO:GO:0005053 PANTHER:PTHR22850:SF4 GeneTree:ENSGT00700000104578
eggNOG:NOG320380 OrthoDB:EOG46X2JK EMBL:X81424 EMBL:X83704
EMBL:AY557700 PIR:S50228 RefSeq:NP_010426.1
ProteinModelPortal:P39108 SMR:P39108 DIP:DIP-1501N IntAct:P39108
MINT:MINT-409587 STRING:P39108 PaxDb:P39108 PeptideAtlas:P39108
EnsemblFungi:YDR142C GeneID:851720 KEGG:sce:YDR142C CYGD:YDR142c
OMA:FKEHERE NextBio:969424 Genevestigator:P39108 GermOnline:YDR142C
Uniprot:P39108
Length = 375
Score = 116 (45.9 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 68/294 (23%), Positives = 126/294 (42%)
Query: 50 QGCVNAISWNS--KGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPETSD 107
Q C+ ++WN + +L++ D T + ++ + ++ +I H VF + +
Sbjct: 60 QDCLFDLAWNESHENQVLVAQGDGT-LRLFDTTFKEFPIAIFKEHEREVFSCNW-NLVNR 117
Query: 108 ELVVSGAGDAEVRLFN-LSRFSGRGLDDNAITPSALYQCHTRRVKKLAVEVG---NPHVV 163
+ +S + D +++++ L + S L + + + + K G N + V
Sbjct: 118 QNFLSSSWDGSIKIWSPLRKQSLMTLTPRPLEITKMVDPLNAIILKKKSFTGISKNRNCV 177
Query: 164 WSASEDGTLRQHDFRQGSSCPPAGSSHQECRNILLDLRCGAKRSLADPPKQTLSLKSCDI 223
+ A HD SC +G+S+ +I L L + L+ CD
Sbjct: 178 YQAQ----FSPHDQNLVLSC--SGNSYASLFDIRLPSGKNQNNFLVHSGLEALT---CDF 228
Query: 224 SSTRPHLLLVGGSDAFARLYDRRMLPPLTSCQ-KRMSPPPCVNYFCPMHL-SEHGRSSLH 281
+ RP+++ GG D R++D RML S KR P N C + + HG L
Sbjct: 229 NKYRPYVVATGGVDNAIRIWDIRMLNKNESATIKRTVPGQLHNSSCINEIPNAHG---LA 285
Query: 282 LTHVTFSPNGEEVLLSYSGEHVYLM--DVNHAGGRAMRYTVG-DASK--IMSFT 330
+ VT+SP+ +L+S S + + D+++ G + T DA+K I +FT
Sbjct: 286 IRKVTWSPHHSNILMSASYDMTCRIWRDLSNDGAKETYKTNSTDATKGSIFNFT 339
Score = 47 (21.6 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 10/22 (45%), Positives = 14/22 (63%)
Query: 633 SFLGQRGDYIASGSDDGRWFIW 654
S G+ G Y+AS + DG F+W
Sbjct: 351 SLWGKPG-YVASTAWDGNLFVW 371
>POMBASE|SPAC821.08c [details] [associations]
symbol:slp1 "sleepy homolog Slp1" species:4896
"Schizosaccharomyces pombe" [GO:0000070 "mitotic sister chromatid
segregation" evidence=IGI] [GO:0000778 "condensed nuclear
chromosome kinetochore" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005819
"spindle" evidence=IDA] [GO:0007092 "activation of mitotic
anaphase-promoting complex activity" evidence=TAS] [GO:0007094
"mitotic spindle assembly checkpoint" evidence=IGI] [GO:0010997
"anaphase-promoting complex binding" evidence=IPI] [GO:0031577
"spindle checkpoint" evidence=IPI] [GO:0032153 "cell division site"
evidence=IDA] [GO:0033314 "mitotic DNA replication checkpoint"
evidence=IGI] [GO:0033597 "mitotic checkpoint complex"
evidence=IDA] [GO:0034613 "cellular protein localization"
evidence=IMP] [GO:0044732 "mitotic spindle pole body" evidence=IDA]
[GO:0045842 "positive regulation of mitotic metaphase/anaphase
transition" evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC821.08c EMBL:CU329670 GO:GO:0034613
GO:GO:0051301 GenomeReviews:CU329670_GR GO:GO:0007094
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0032153 GO:GO:0044732 eggNOG:COG2319
GO:GO:0000070 GO:GO:0000778 GO:GO:0007092 GO:GO:0033314
GO:GO:0033597 KO:K03363 HOGENOM:HOG000195514 OrthoDB:EOG4KD9V8
PDB:4AEZ PDBsum:4AEZ EMBL:U77983 PIR:T41719 RefSeq:NP_593161.1
ProteinModelPortal:P78972 DIP:DIP-38036N IntAct:P78972
STRING:P78972 EnsemblFungi:SPAC821.08c.1 GeneID:2543222
KEGG:spo:SPAC821.08c OMA:GINTSSH NextBio:20804244 Uniprot:P78972
Length = 488
Score = 121 (47.7 bits), Expect = 0.00053, P = 0.00053
Identities = 34/134 (25%), Positives = 61/134 (45%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPET 105
L+GH V ++W S G L SG +D + +W S + +T H+A V + P
Sbjct: 300 LQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARS-SIPKFTKTNHNAAVKAVAWCPWQ 358
Query: 106 SDELVVSGAG--DAEVRLFNLSRFSG-RGLDDNAITPSALYQCHTRRVKKLAVEVGNPHV 162
S+ L+ +G G D ++ +N + + +D + S ++ H++ + N
Sbjct: 359 SN-LLATGGGTMDKQIHFWNAATGARVNTVDAGSQVTSLIWSPHSKEIMSTHGFPDNNLS 417
Query: 163 VWSASEDGTLRQHD 176
+WS S G +Q D
Sbjct: 418 IWSYSSSGLTKQVD 431
>MGI|MGI:1920393 [details] [associations]
symbol:Wdr37 "WD repeat domain 37" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1920393 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00640000091456
EMBL:AK129254 EMBL:AK032582 EMBL:AK036203 EMBL:BC046236
IPI:IPI00387421 RefSeq:NP_001034477.1 RefSeq:NP_766033.1
UniGene:Mm.284654 ProteinModelPortal:Q8CBE3 SMR:Q8CBE3
IntAct:Q8CBE3 STRING:Q8CBE3 PhosphoSite:Q8CBE3 PaxDb:Q8CBE3
PRIDE:Q8CBE3 Ensembl:ENSMUST00000021572 Ensembl:ENSMUST00000054251
GeneID:207615 KEGG:mmu:207615 UCSC:uc007pki.1 CTD:22884
HOGENOM:HOG000013185 HOVERGEN:HBG057072 InParanoid:Q8CBE3
OMA:TGLPRDM OrthoDB:EOG4DZ1V5 NextBio:371979 Bgee:Q8CBE3
CleanEx:MM_WDR37 Genevestigator:Q8CBE3
GermOnline:ENSMUSG00000021147 Uniprot:Q8CBE3
Length = 496
Score = 121 (47.7 bits), Expect = 0.00054, P = 0.00054
Identities = 45/166 (27%), Positives = 75/166 (45%)
Query: 13 DMLDTRHTDTRPDVNHSLQMHSSLVRRLSQERELEGHQGCVNAISWNSKGSLLISGSDDT 72
D ++ D PD++ + VR L+ HQG V A W G +++ S D
Sbjct: 249 DEIECSDKD-EPDIDGDVSSDCPTVR--VPLTSLKSHQGVVIAADWLVGGKQVVTASWDR 305
Query: 73 HINVWSYSSRKLLHSIETGHSANVFCTKFVPETSDELVVSGAGDAEVRLFNLSRFSGRGL 132
N++ + +L+HS+ TGH + T + LVV+ + D RL++
Sbjct: 306 TANLYDVETSELVHSL-TGHDQEL--THCCTHPTQRLVVTSSRDTTFRLWDFR------- 355
Query: 133 DDNAITPSALYQCHTRRVKKLAVEVGNPHVVWSASEDGTLRQHDFR 178
D +I ++Q HT V VG+ +VV S S+D T++ D +
Sbjct: 356 -DPSIHSVNVFQGHTDTVTSAVFTVGD-NVV-SGSDDRTVKVWDLK 398
>POMBASE|SPCC18.05c [details] [associations]
symbol:SPCC18.05c "notchless-like protein (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=ISS] [GO:0042254
"ribosome biogenesis" evidence=ISS] [GO:0043234 "protein complex"
evidence=NAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 PomBase:SPCC18.05c GO:GO:0043234
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329672 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0042254 HSSP:P16649 PRINTS:PR00319
HOGENOM:HOG000091641 KO:K14855 InterPro:IPR012972 Pfam:PF08154
PIR:T41148 RefSeq:NP_588384.1 ProteinModelPortal:O74855
STRING:O74855 EnsemblFungi:SPCC18.05c.1 GeneID:2539380
KEGG:spo:SPCC18.05c OMA:KAVRIWR OrthoDB:EOG4PP1R9 NextBio:20800545
Uniprot:O74855
Length = 502
Score = 121 (47.7 bits), Expect = 0.00055, P = 0.00055
Identities = 26/78 (33%), Positives = 40/78 (51%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPET 105
L GH V +W++ LL+S S DT + VW S+K+ + GH VF + P+
Sbjct: 427 LRGHVAAVYQCAWSTDSRLLVSSSQDTTLKVWDVRSKKMKFDLP-GHEDQVFAVDWSPD- 484
Query: 106 SDELVVSGAGDAEVRLFN 123
+ V SG D VR+++
Sbjct: 485 -GQRVASGGADKAVRIWS 501
>CGD|CAL0003392 [details] [associations]
symbol:PWP2 species:5476 "Candida albicans" [GO:0032040
"small-subunit processome" evidence=IDA] [GO:0030515 "snoRNA
binding" evidence=IEA] [GO:0034388 "Pwp2p-containing subcomplex of
90S preribosome" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0030010 "establishment of cell polarity" evidence=IEA]
[GO:0000472 "endonucleolytic cleavage to generate mature 5'-end of
SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000910 "cytokinesis" evidence=IEA] [GO:0000447
"endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S
rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S
rRNA, LSU-rRNA)" evidence=IEA] [GO:0000480 "endonucleolytic
cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S
rRNA, LSU-rRNA)" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0003392 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR011047
SUPFAM:SSF50998 GO:GO:0032040 EMBL:AACQ01000049 EMBL:AACQ01000048
KO:K14558 InterPro:IPR027145 InterPro:IPR007148 PANTHER:PTHR19858
Pfam:PF04003 RefSeq:XP_717900.1 RefSeq:XP_717966.1
ProteinModelPortal:Q5A852 STRING:Q5A852 GeneID:3640416
GeneID:3640479 KEGG:cal:CaO19.10786 KEGG:cal:CaO19.3276
Uniprot:Q5A852
Length = 922
Score = 124 (48.7 bits), Expect = 0.00059, P = 0.00059
Identities = 40/120 (33%), Positives = 62/120 (51%)
Query: 54 NAISWNSKGSLLISGSDDT-HINVWSYSSRKLLHSIETGHSANVFCTKFVPETSDELVVS 112
N ++ + G +++ GS DT I VWS + +LL S+ TGH + C F E S ++ S
Sbjct: 428 NCLAVDPSGEVIVGGSQDTFEIYVWSVQTGQLLDSL-TGHEGPISCLTFGKENS--ILAS 484
Query: 113 GAGDAEVRLFNLSRFS-GRGLDDNAITPSALYQCHTRR--VKKLAVEVGNPHVVWSASED 169
+ D +R++N+ FS + ++ I AL C T R K+LAV + HV ED
Sbjct: 485 ASWDKTIRIWNI--FSRNQTVEPIEIQSDAL--CLTMRPDCKELAVSTLDGHVTIFDIED 540
>UNIPROTKB|Q5A852 [details] [associations]
symbol:PWP2 "Putative uncharacterized protein PWP2"
species:237561 "Candida albicans SC5314" [GO:0032040 "small-subunit
processome" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0003392 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR011047
SUPFAM:SSF50998 GO:GO:0032040 EMBL:AACQ01000049 EMBL:AACQ01000048
KO:K14558 InterPro:IPR027145 InterPro:IPR007148 PANTHER:PTHR19858
Pfam:PF04003 RefSeq:XP_717900.1 RefSeq:XP_717966.1
ProteinModelPortal:Q5A852 STRING:Q5A852 GeneID:3640416
GeneID:3640479 KEGG:cal:CaO19.10786 KEGG:cal:CaO19.3276
Uniprot:Q5A852
Length = 922
Score = 124 (48.7 bits), Expect = 0.00059, P = 0.00059
Identities = 40/120 (33%), Positives = 62/120 (51%)
Query: 54 NAISWNSKGSLLISGSDDT-HINVWSYSSRKLLHSIETGHSANVFCTKFVPETSDELVVS 112
N ++ + G +++ GS DT I VWS + +LL S+ TGH + C F E S ++ S
Sbjct: 428 NCLAVDPSGEVIVGGSQDTFEIYVWSVQTGQLLDSL-TGHEGPISCLTFGKENS--ILAS 484
Query: 113 GAGDAEVRLFNLSRFS-GRGLDDNAITPSALYQCHTRR--VKKLAVEVGNPHVVWSASED 169
+ D +R++N+ FS + ++ I AL C T R K+LAV + HV ED
Sbjct: 485 ASWDKTIRIWNI--FSRNQTVEPIEIQSDAL--CLTMRPDCKELAVSTLDGHVTIFDIED 540
>UNIPROTKB|P63247 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9031 "Gallus gallus" [GO:0007165 "signal
transduction" evidence=TAS] [GO:0001891 "phagocytic cup"
evidence=IEA] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008200 "ion channel inhibitor activity" evidence=IEA]
[GO:0008656 "cysteine-type endopeptidase activator activity
involved in apoptotic process" evidence=IEA] [GO:0019903 "protein
phosphatase binding" evidence=IEA] [GO:0030292 "protein tyrosine
kinase inhibitor activity" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0030335 "positive
regulation of cell migration" evidence=IEA] [GO:0030425 "dendrite"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0030971
"receptor tyrosine kinase binding" evidence=IEA] [GO:0032436
"positive regulation of proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0032464 "positive regulation
of protein homooligomerization" evidence=IEA] [GO:0042169 "SH2
domain binding" evidence=IEA] [GO:0043065 "positive regulation of
apoptotic process" evidence=IEA] [GO:0043547 "positive regulation
of GTPase activity" evidence=IEA] [GO:0048471 "perinuclear region
of cytoplasm" evidence=IEA] [GO:0050765 "negative regulation of
phagocytosis" evidence=IEA] [GO:0051726 "regulation of cell cycle"
evidence=IEA] [GO:0051898 "negative regulation of protein kinase B
signaling cascade" evidence=IEA] [GO:2001244 "positive regulation
of intrinsic apoptotic signaling pathway" evidence=IEA] [GO:0030178
"negative regulation of Wnt receptor signaling pathway"
evidence=ISS] [GO:0032880 "regulation of protein localization"
evidence=ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:2000114 "regulation of establishment of cell
polarity" evidence=ISS] [GO:2000543 "positive regulation of
gastrulation" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0043025 "neuronal cell body" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0005737
GO:GO:0048471 GO:GO:0007165 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0043547
GO:GO:0043025 GO:GO:0030425 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0032880 GO:GO:0043065 GO:GO:0051726
GO:GO:0001891 GO:GO:0030335 GO:GO:0050765 GO:GO:0001934
GO:GO:0030496 GO:GO:0032436 GO:GO:0008200 GO:GO:0030178
GO:GO:2001244 GO:GO:0032464 GO:GO:2000114 GO:GO:0051302
GO:GO:2000543 GO:GO:0030292 HOGENOM:HOG000091643 KO:K14753
CTD:10399 HOVERGEN:HBG000277 OrthoDB:EOG4933J5 EMBL:M24193
EMBL:AY393848 EMBL:AY694127 EMBL:AB268588 IPI:IPI00596315
PIR:A33928 RefSeq:NP_001004378.1 UniGene:Gga.7066
ProteinModelPortal:P63247 SMR:P63247 STRING:P63247 PRIDE:P63247
GeneID:417044 KEGG:gga:417044 InParanoid:A5HUK6 NextBio:20820423
Uniprot:P63247
Length = 317
Score = 102 (41.0 bits), Expect = 0.00059, Sum P(2) = 0.00059
Identities = 24/82 (29%), Positives = 43/82 (52%)
Query: 44 RELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVP 103
R GH V +++++S ++SGS D I +W+ + HS V C +F P
Sbjct: 99 RRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSP 158
Query: 104 ETSDELVVSGAGDAEVRLFNLS 125
+S+ ++VS D V+++NL+
Sbjct: 159 NSSNPIIVSCGWDKLVKVWNLA 180
Score = 59 (25.8 bits), Expect = 0.00059, Sum P(2) = 0.00059
Identities = 16/63 (25%), Positives = 30/63 (47%)
Query: 615 MKQRYVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAGNVI 674
+K ++GH T + G ASG DG+ +W+ G+ + L G G++I
Sbjct: 184 LKTNHIGH----TGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG---GDII 236
Query: 675 SSM 677
+++
Sbjct: 237 NAL 239
>UNIPROTKB|P63243 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9913 "Bos taurus" [GO:0030971 "receptor
tyrosine kinase binding" evidence=ISS] [GO:0030292 "protein
tyrosine kinase inhibitor activity" evidence=ISS] [GO:0050765
"negative regulation of phagocytosis" evidence=ISS] [GO:0043547
"positive regulation of GTPase activity" evidence=ISS] [GO:0043065
"positive regulation of apoptotic process" evidence=ISS]
[GO:0030178 "negative regulation of Wnt receptor signaling pathway"
evidence=ISS] [GO:0030496 "midbody" evidence=ISS] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0001891 "phagocytic cup" evidence=ISS] [GO:0042169 "SH2 domain
binding" evidence=ISS] [GO:0005080 "protein kinase C binding"
evidence=ISS] [GO:0051726 "regulation of cell cycle" evidence=ISS]
[GO:0032464 "positive regulation of protein homooligomerization"
evidence=ISS] [GO:0032436 "positive regulation of proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0030335 "positive regulation of cell migration" evidence=ISS]
[GO:0030308 "negative regulation of cell growth" evidence=ISS]
[GO:0001934 "positive regulation of protein phosphorylation"
evidence=ISS] [GO:2000543 "positive regulation of gastrulation"
evidence=ISS] [GO:2000114 "regulation of establishment of cell
polarity" evidence=ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:0032880 "regulation of protein localization"
evidence=ISS] [GO:0043025 "neuronal cell body" evidence=ISS]
[GO:0043204 "perikaryon" evidence=IEA] [GO:0030425 "dendrite"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:2001244
"positive regulation of intrinsic apoptotic signaling pathway"
evidence=IEA] [GO:0051898 "negative regulation of protein kinase B
signaling cascade" evidence=IEA] [GO:0019903 "protein phosphatase
binding" evidence=IEA] [GO:0008656 "cysteine-type endopeptidase
activator activity involved in apoptotic process" evidence=IEA]
[GO:0008200 "ion channel inhibitor activity" evidence=IEA]
[GO:0048511 "rhythmic process" evidence=IEA] [GO:0007369
"gastrulation" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0006417 "regulation of translation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:AJ132860 GO:GO:0005634 GO:GO:0048471 GO:GO:0006915
GO:GO:0005080 GO:GO:0006417 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005856
GO:GO:0043547 GO:GO:0043025 GO:GO:0030425 GO:GO:0043204
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0032880
GO:GO:0048511 GO:GO:0007049 GO:GO:0043065 GO:GO:0051726
GO:GO:0001891 GO:GO:0042169 GO:GO:0030335 GO:GO:0050765
GO:GO:0001934 GO:GO:0030496 GO:GO:0032436 GO:GO:0008200
GO:GO:0030971 GO:GO:0030178 GO:GO:2001244 GO:GO:0007369
GO:GO:0032464 GO:GO:2000114 GO:GO:0051302 GO:GO:2000543
GO:GO:0030292 HOGENOM:HOG000091643 KO:K14753 OMA:IRVWQVM
EMBL:BC102286 IPI:IPI00700792 RefSeq:NP_786996.1 UniGene:Bt.2981
ProteinModelPortal:P63243 SMR:P63243 STRING:P63243 PRIDE:P63243
Ensembl:ENSBTAT00000026183 GeneID:327682 KEGG:bta:327682 CTD:10399
GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277 InParanoid:P63243
OrthoDB:EOG4933J5 NextBio:20810147 ArrayExpress:P63243
Uniprot:P63243
Length = 317
Score = 102 (41.0 bits), Expect = 0.00059, Sum P(2) = 0.00059
Identities = 24/82 (29%), Positives = 43/82 (52%)
Query: 44 RELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVP 103
R GH V +++++S ++SGS D I +W+ + HS V C +F P
Sbjct: 99 RRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSP 158
Query: 104 ETSDELVVSGAGDAEVRLFNLS 125
+S+ ++VS D V+++NL+
Sbjct: 159 NSSNPIIVSCGWDKLVKVWNLA 180
Score = 59 (25.8 bits), Expect = 0.00059, Sum P(2) = 0.00059
Identities = 16/63 (25%), Positives = 30/63 (47%)
Query: 615 MKQRYVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAGNVI 674
+K ++GH T + G ASG DG+ +W+ G+ + L G G++I
Sbjct: 184 LKTNHIGH----TGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG---GDII 236
Query: 675 SSM 677
+++
Sbjct: 237 NAL 239
>UNIPROTKB|F1PLR0 [details] [associations]
symbol:GNB2L1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2001244 "positive regulation of intrinsic
apoptotic signaling pathway" evidence=IEA] [GO:0051898 "negative
regulation of protein kinase B signaling cascade" evidence=IEA]
[GO:0051726 "regulation of cell cycle" evidence=IEA] [GO:0050765
"negative regulation of phagocytosis" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0043547
"positive regulation of GTPase activity" evidence=IEA] [GO:0043065
"positive regulation of apoptotic process" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0042169 "SH2
domain binding" evidence=IEA] [GO:0032464 "positive regulation of
protein homooligomerization" evidence=IEA] [GO:0032436 "positive
regulation of proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030971 "receptor tyrosine kinase
binding" evidence=IEA] [GO:0030496 "midbody" evidence=IEA]
[GO:0030425 "dendrite" evidence=IEA] [GO:0030335 "positive
regulation of cell migration" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0030292 "protein
tyrosine kinase inhibitor activity" evidence=IEA] [GO:0019903
"protein phosphatase binding" evidence=IEA] [GO:0008656
"cysteine-type endopeptidase activator activity involved in
apoptotic process" evidence=IEA] [GO:0008200 "ion channel inhibitor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001934 "positive regulation of protein phosphorylation"
evidence=IEA] [GO:0001891 "phagocytic cup" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 GO:GO:0048471 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0043547
GO:GO:0043025 GO:GO:0030425 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0043065 GO:GO:0051726 GO:GO:0001891 GO:GO:0030335
GO:GO:0050765 GO:GO:0001934 GO:GO:0030496 GO:GO:0032436
GO:GO:0008200 GO:GO:2001244 GO:GO:0032464 GO:GO:0030292 OMA:IRVWQVM
GeneTree:ENSGT00700000104461 EMBL:AAEX03007665
ProteinModelPortal:F1PLR0 Ensembl:ENSCAFT00000020233 Uniprot:F1PLR0
Length = 317
Score = 102 (41.0 bits), Expect = 0.00059, Sum P(2) = 0.00059
Identities = 24/82 (29%), Positives = 43/82 (52%)
Query: 44 RELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVP 103
R GH V +++++S ++SGS D I +W+ + HS V C +F P
Sbjct: 99 RRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSP 158
Query: 104 ETSDELVVSGAGDAEVRLFNLS 125
+S+ ++VS D V+++NL+
Sbjct: 159 NSSNPIIVSCGWDKLVKVWNLA 180
Score = 59 (25.8 bits), Expect = 0.00059, Sum P(2) = 0.00059
Identities = 16/63 (25%), Positives = 30/63 (47%)
Query: 615 MKQRYVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAGNVI 674
+K ++GH T + G ASG DG+ +W+ G+ + L G G++I
Sbjct: 184 LKTNHIGH----TGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG---GDII 236
Query: 675 SSM 677
+++
Sbjct: 237 NAL 239
>UNIPROTKB|P63244 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9606 "Homo sapiens" [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007369 "gastrulation" evidence=IEA] [GO:0019048
"virus-host interaction" evidence=IEA] [GO:0048511 "rhythmic
process" evidence=IEA] [GO:0090003 "regulation of establishment of
protein localization to plasma membrane" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0043204 "perikaryon" evidence=IEA]
[GO:0005102 "receptor binding" evidence=NAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0019903 "protein phosphatase binding"
evidence=IPI] [GO:0030496 "midbody" evidence=IDA] [GO:0043025
"neuronal cell body" evidence=ISS] [GO:0042169 "SH2 domain binding"
evidence=IDA] [GO:0030971 "receptor tyrosine kinase binding"
evidence=IDA] [GO:0030292 "protein tyrosine kinase inhibitor
activity" evidence=IDA] [GO:0030308 "negative regulation of cell
growth" evidence=IDA] [GO:0051726 "regulation of cell cycle"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005080 "protein kinase C binding"
evidence=IDA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=IDA] [GO:0015935 "small ribosomal
subunit" evidence=ISS] [GO:0030425 "dendrite" evidence=ISS]
[GO:0032436 "positive regulation of proteasomal ubiquitin-dependent
protein catabolic process" evidence=IDA] [GO:0032464 "positive
regulation of protein homooligomerization" evidence=IDA]
[GO:0043065 "positive regulation of apoptotic process"
evidence=IMP;IDA] [GO:0030335 "positive regulation of cell
migration" evidence=IDA] [GO:0043547 "positive regulation of GTPase
activity" evidence=IDA] [GO:0001891 "phagocytic cup" evidence=IDA]
[GO:0050765 "negative regulation of phagocytosis" evidence=IMP]
[GO:0008200 "ion channel inhibitor activity" evidence=ISS]
[GO:0030178 "negative regulation of Wnt receptor signaling pathway"
evidence=ISS] [GO:0032880 "regulation of protein localization"
evidence=ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:2000114 "regulation of establishment of cell
polarity" evidence=ISS] [GO:2000543 "positive regulation of
gastrulation" evidence=ISS] [GO:2001244 "positive regulation of
intrinsic apoptotic signaling pathway" evidence=IMP] [GO:0006919
"activation of cysteine-type endopeptidase activity involved in
apoptotic process" evidence=IMP] [GO:0051898 "negative regulation
of protein kinase B signaling cascade" evidence=IMP] [GO:0008656
"cysteine-type endopeptidase activator activity involved in
apoptotic process" evidence=IMP] [GO:0017148 "negative regulation
of translation" evidence=ISS] [GO:0061099 "negative regulation of
protein tyrosine kinase activity" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0048471
Pathway_Interaction_DB:igf1_pathway GO:GO:0019048 GO:GO:0005080
GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005856 GO:GO:0017148 GO:GO:0043547
Pathway_Interaction_DB:syndecan_2_pathway GO:GO:0043025
GO:GO:0030425 GO:GO:0043204 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0032880 GO:GO:0048511 GO:GO:0007049
GO:GO:0043065 GO:GO:0051726 GO:GO:0001891 GO:GO:0042169
Pathway_Interaction_DB:tnfpathway GO:GO:0030335 GO:GO:0050765
GO:GO:0001934 GO:GO:0008656 GO:GO:0030496 GO:GO:0032436
GO:GO:0008200 Pathway_Interaction_DB:ar_tf_pathway GO:GO:0030971
GO:GO:0030178 GO:GO:2001244 GO:GO:0007369
Pathway_Interaction_DB:hif1apathway EMBL:CH471165 GO:GO:0032464
GO:GO:2000114 GO:GO:0051302 GO:GO:0051898 GO:GO:2000543
GO:GO:0030292 KO:K14753 OMA:IRVWQVM CTD:10399 HOVERGEN:HBG000277
ChiTaRS:GNB2L1 EMBL:M24194 EMBL:AY159316 EMBL:AY336089
EMBL:AK095666 EMBL:CR456978 EMBL:CR541909 EMBL:AK222488
EMBL:BC000214 EMBL:BC000366 EMBL:BC010119 EMBL:BC014256
EMBL:BC014788 EMBL:BC017287 EMBL:BC019093 EMBL:BC019362
EMBL:BC021993 EMBL:BC032006 IPI:IPI00848226 PIR:B33928
RefSeq:NP_006089.1 UniGene:Hs.5662 PDB:4AOW PDBsum:4AOW
ProteinModelPortal:P63244 SMR:P63244 IntAct:P63244 MINT:MINT-105673
STRING:P63244 PhosphoSite:P63244 DMDM:54037168
REPRODUCTION-2DPAGE:IPI00848226 REPRODUCTION-2DPAGE:P63244
PaxDb:P63244 PRIDE:P63244 DNASU:10399 Ensembl:ENST00000512805
GeneID:10399 KEGG:hsa:10399 UCSC:uc003mni.1 GeneCards:GC05M180663
HGNC:HGNC:4399 HPA:CAB004288 HPA:HPA021676 MIM:176981
neXtProt:NX_P63244 PharmGKB:PA28779 InParanoid:P63244
GenomeRNAi:10399 NextBio:39404 ArrayExpress:P63244 Bgee:P63244
CleanEx:HS_GNB2L1 Genevestigator:P63244 GermOnline:ENSG00000204628
GO:GO:0015935 Uniprot:P63244
Length = 317
Score = 102 (41.0 bits), Expect = 0.00059, Sum P(2) = 0.00059
Identities = 24/82 (29%), Positives = 43/82 (52%)
Query: 44 RELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVP 103
R GH V +++++S ++SGS D I +W+ + HS V C +F P
Sbjct: 99 RRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSP 158
Query: 104 ETSDELVVSGAGDAEVRLFNLS 125
+S+ ++VS D V+++NL+
Sbjct: 159 NSSNPIIVSCGWDKLVKVWNLA 180
Score = 59 (25.8 bits), Expect = 0.00059, Sum P(2) = 0.00059
Identities = 16/63 (25%), Positives = 30/63 (47%)
Query: 615 MKQRYVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAGNVI 674
+K ++GH T + G ASG DG+ +W+ G+ + L G G++I
Sbjct: 184 LKTNHIGH----TGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG---GDII 236
Query: 675 SSM 677
+++
Sbjct: 237 NAL 239
>UNIPROTKB|P63246 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9823 "Sus scrofa" [GO:0061099 "negative
regulation of protein tyrosine kinase activity" evidence=ISS]
[GO:0005080 "protein kinase C binding" evidence=ISS] [GO:0030496
"midbody" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0001891 "phagocytic cup"
evidence=ISS] [GO:0042169 "SH2 domain binding" evidence=ISS]
[GO:0030971 "receptor tyrosine kinase binding" evidence=ISS]
[GO:0030292 "protein tyrosine kinase inhibitor activity"
evidence=ISS] [GO:0051726 "regulation of cell cycle" evidence=ISS]
[GO:0050765 "negative regulation of phagocytosis" evidence=ISS]
[GO:0043547 "positive regulation of GTPase activity" evidence=ISS]
[GO:0043065 "positive regulation of apoptotic process"
evidence=ISS] [GO:0032464 "positive regulation of protein
homooligomerization" evidence=ISS] [GO:0032436 "positive regulation
of proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0030335 "positive regulation of cell migration"
evidence=ISS] [GO:0030308 "negative regulation of cell growth"
evidence=ISS] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=ISS] [GO:2000543 "positive regulation of
gastrulation" evidence=ISS] [GO:2000114 "regulation of
establishment of cell polarity" evidence=ISS] [GO:0051302
"regulation of cell division" evidence=ISS] [GO:0032880 "regulation
of protein localization" evidence=ISS] [GO:0030178 "negative
regulation of Wnt receptor signaling pathway" evidence=ISS]
[GO:0043025 "neuronal cell body" evidence=ISS] [GO:0043204
"perikaryon" evidence=IEA] [GO:0030425 "dendrite" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0048511 "rhythmic
process" evidence=IEA] [GO:0007369 "gastrulation" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0006915 "apoptotic
process" evidence=IEA] [GO:0006417 "regulation of translation"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0048471 GO:GO:0006915
GO:GO:0005080 GO:GO:0006417 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005856
GO:GO:0043547 GO:GO:0043025 GO:GO:0030425 GO:GO:0043204
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0032880 GO:GO:0048511
GO:GO:0007049 GO:GO:0043065 GO:GO:0051726 GO:GO:0001891
GO:GO:0042169 GO:GO:0030335 GO:GO:0050765 GO:GO:0001934
GO:GO:0030496 GO:GO:0032436 GO:GO:0030971 GO:GO:0030178
GO:GO:0007369 GO:GO:0032464 GO:GO:2000114 GO:GO:0051302
GO:GO:2000543 GO:GO:0030292 KO:K14753 CTD:10399 HOVERGEN:HBG000277
EMBL:Z33879 EMBL:AF146043 PIR:S45054 RefSeq:NP_999497.1
UniGene:Ssc.12515 ProteinModelPortal:P63246 SMR:P63246 PRIDE:P63246
GeneID:397605 KEGG:ssc:397605 Uniprot:P63246
Length = 317
Score = 102 (41.0 bits), Expect = 0.00059, Sum P(2) = 0.00059
Identities = 24/82 (29%), Positives = 43/82 (52%)
Query: 44 RELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVP 103
R GH V +++++S ++SGS D I +W+ + HS V C +F P
Sbjct: 99 RRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSP 158
Query: 104 ETSDELVVSGAGDAEVRLFNLS 125
+S+ ++VS D V+++NL+
Sbjct: 159 NSSNPIIVSCGWDKLVKVWNLA 180
Score = 59 (25.8 bits), Expect = 0.00059, Sum P(2) = 0.00059
Identities = 16/63 (25%), Positives = 30/63 (47%)
Query: 615 MKQRYVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAGNVI 674
+K ++GH T + G ASG DG+ +W+ G+ + L G G++I
Sbjct: 184 LKTNHIGH----TGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG---GDII 236
Query: 675 SSM 677
+++
Sbjct: 237 NAL 239
>UNIPROTKB|B1N1C2 [details] [associations]
symbol:GNB2L1 "Uncharacterized protein" species:9103
"Meleagris gallopavo" [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0043025 "neuronal cell body" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0005737
GO:GO:0048471 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0043547 GO:GO:0043025
GO:GO:0030425 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043065
GO:GO:0051726 GO:GO:0001891 GO:GO:0030335 GO:GO:0050765
GO:GO:0001934 GO:GO:0030496 GO:GO:0032436 GO:GO:0008200
GO:GO:2001244 GO:GO:0032464 GO:GO:0030292 KO:K14753 OMA:IRVWQVM
CTD:10399 GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277
EMBL:DQ993255 RefSeq:XP_003211191.1 UniGene:Mga.4509
ProteinModelPortal:B1N1C2 SMR:B1N1C2 PRIDE:B1N1C2
Ensembl:ENSMGAT00000000634 GeneID:100541375 KEGG:mgp:100541375
Uniprot:B1N1C2
Length = 317
Score = 102 (41.0 bits), Expect = 0.00059, Sum P(2) = 0.00059
Identities = 24/82 (29%), Positives = 43/82 (52%)
Query: 44 RELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVP 103
R GH V +++++S ++SGS D I +W+ + HS V C +F P
Sbjct: 99 RRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSP 158
Query: 104 ETSDELVVSGAGDAEVRLFNLS 125
+S+ ++VS D V+++NL+
Sbjct: 159 NSSNPIIVSCGWDKLVKVWNLA 180
Score = 59 (25.8 bits), Expect = 0.00059, Sum P(2) = 0.00059
Identities = 16/63 (25%), Positives = 30/63 (47%)
Query: 615 MKQRYVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAGNVI 674
+K ++GH T + G ASG DG+ +W+ G+ + L G G++I
Sbjct: 184 LKTNHIGH----TGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG---GDII 236
Query: 675 SSM 677
+++
Sbjct: 237 NAL 239
>UNIPROTKB|Q4R7Y4 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9541 "Macaca fascicularis" [GO:0001891
"phagocytic cup" evidence=ISS] [GO:0001934 "positive regulation of
protein phosphorylation" evidence=ISS] [GO:0005080 "protein kinase
C binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0030178 "negative
regulation of Wnt receptor signaling pathway" evidence=ISS]
[GO:0030292 "protein tyrosine kinase inhibitor activity"
evidence=ISS] [GO:0030308 "negative regulation of cell growth"
evidence=ISS] [GO:0030335 "positive regulation of cell migration"
evidence=ISS] [GO:0030496 "midbody" evidence=ISS] [GO:0030971
"receptor tyrosine kinase binding" evidence=ISS] [GO:0032436
"positive regulation of proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0032464 "positive regulation
of protein homooligomerization" evidence=ISS] [GO:0032880
"regulation of protein localization" evidence=ISS] [GO:0042169 "SH2
domain binding" evidence=ISS] [GO:0043025 "neuronal cell body"
evidence=ISS] [GO:0043065 "positive regulation of apoptotic
process" evidence=ISS] [GO:0043547 "positive regulation of GTPase
activity" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0050765 "negative regulation of
phagocytosis" evidence=ISS] [GO:0051302 "regulation of cell
division" evidence=ISS] [GO:0051726 "regulation of cell cycle"
evidence=ISS] [GO:0061099 "negative regulation of protein tyrosine
kinase activity" evidence=ISS] [GO:2000114 "regulation of
establishment of cell polarity" evidence=ISS] [GO:2000543 "positive
regulation of gastrulation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0048471
GO:GO:0006915 GO:GO:0005080 GO:GO:0006417 GO:GO:0030308
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005856 GO:GO:0043547 GO:GO:0043025
GO:GO:0030425 GO:GO:0043204 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0032880 GO:GO:0048511 GO:GO:0007049 GO:GO:0043065
GO:GO:0051726 GO:GO:0001891 GO:GO:0042169 GO:GO:0030335
GO:GO:0050765 GO:GO:0001934 GO:GO:0030496 GO:GO:0032436
GO:GO:0030971 GO:GO:0030178 GO:GO:0007369 GO:GO:0032464
GO:GO:2000114 GO:GO:0051302 GO:GO:2000543 GO:GO:0030292
HOVERGEN:HBG000277 EMBL:AB168677 ProteinModelPortal:Q4R7Y4
SMR:Q4R7Y4 PRIDE:Q4R7Y4 Uniprot:Q4R7Y4
Length = 317
Score = 102 (41.0 bits), Expect = 0.00059, Sum P(2) = 0.00059
Identities = 24/82 (29%), Positives = 43/82 (52%)
Query: 44 RELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVP 103
R GH V +++++S ++SGS D I +W+ + HS V C +F P
Sbjct: 99 RRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSP 158
Query: 104 ETSDELVVSGAGDAEVRLFNLS 125
+S+ ++VS D V+++NL+
Sbjct: 159 NSSNPIIVSCGWDKLVKVWNLA 180
Score = 59 (25.8 bits), Expect = 0.00059, Sum P(2) = 0.00059
Identities = 16/63 (25%), Positives = 30/63 (47%)
Query: 615 MKQRYVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAGNVI 674
+K ++GH T + G ASG DG+ +W+ G+ + L G G++I
Sbjct: 184 LKTNHIGH----TGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG---GDII 236
Query: 675 SSM 677
+++
Sbjct: 237 NAL 239
>UNIPROTKB|Q5U275 [details] [associations]
symbol:gnb2l1 "LOC495666 protein" species:8355 "Xenopus
laevis" [GO:0005737 "cytoplasm" evidence=ISS] [GO:0043025 "neuronal
cell body" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 KO:K14753 HOVERGEN:HBG000277 EMBL:BC086231
RefSeq:NP_001088625.1 UniGene:Xl.49445 ProteinModelPortal:Q5U275
SMR:Q5U275 PRIDE:Q5U275 GeneID:495666 KEGG:xla:495666
Xenbase:XB-GENE-5927586 Uniprot:Q5U275
Length = 317
Score = 102 (41.0 bits), Expect = 0.00059, Sum P(2) = 0.00059
Identities = 24/82 (29%), Positives = 43/82 (52%)
Query: 44 RELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVP 103
R GH V +++++S ++SGS D I +W+ + HS V C +F P
Sbjct: 99 RRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSP 158
Query: 104 ETSDELVVSGAGDAEVRLFNLS 125
+S+ ++VS D V+++NL+
Sbjct: 159 NSSNPIIVSCGWDKLVKVWNLA 180
Score = 59 (25.8 bits), Expect = 0.00059, Sum P(2) = 0.00059
Identities = 16/63 (25%), Positives = 30/63 (47%)
Query: 615 MKQRYVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAGNVI 674
+K ++GH T + G ASG DG+ +W+ G+ + L G G++I
Sbjct: 184 LKTNHIGH----TGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG---GDII 236
Query: 675 SSM 677
+++
Sbjct: 237 NAL 239
>MGI|MGI:101849 [details] [associations]
symbol:Gnb2l1 "guanine nucleotide binding protein (G
protein), beta polypeptide 2 like 1" species:10090 "Mus musculus"
[GO:0001891 "phagocytic cup" evidence=ISO] [GO:0001934 "positive
regulation of protein phosphorylation" evidence=ISO] [GO:0004872
"receptor activity" evidence=ISA] [GO:0005080 "protein kinase C
binding" evidence=ISO;ISA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO;IDA] [GO:0005856 "cytoskeleton"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006417 "regulation of translation" evidence=IEA] [GO:0006915
"apoptotic process" evidence=IEA] [GO:0006919 "activation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=ISO] [GO:0007049 "cell cycle" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007369
"gastrulation" evidence=IEA] [GO:0008104 "protein localization"
evidence=ISA] [GO:0008200 "ion channel inhibitor activity"
evidence=IDA] [GO:0008656 "cysteine-type endopeptidase activator
activity involved in apoptotic process" evidence=ISO] [GO:0015935
"small ribosomal subunit" evidence=ISO] [GO:0016020 "membrane"
evidence=IEA] [GO:0017148 "negative regulation of translation"
evidence=ISO] [GO:0019903 "protein phosphatase binding"
evidence=ISO] [GO:0030292 "protein tyrosine kinase inhibitor
activity" evidence=ISO] [GO:0030308 "negative regulation of cell
growth" evidence=ISO] [GO:0030335 "positive regulation of cell
migration" evidence=ISO] [GO:0030425 "dendrite" evidence=IDA]
[GO:0030496 "midbody" evidence=ISO] [GO:0030971 "receptor tyrosine
kinase binding" evidence=ISO] [GO:0032436 "positive regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISO] [GO:0032464 "positive regulation of protein
homooligomerization" evidence=ISO] [GO:0035556 "intracellular
signal transduction" evidence=ISA] [GO:0040008 "regulation of
growth" evidence=IEA] [GO:0042169 "SH2 domain binding"
evidence=ISO] [GO:0042995 "cell projection" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0043065
"positive regulation of apoptotic process" evidence=ISO]
[GO:0043547 "positive regulation of GTPase activity" evidence=ISO]
[GO:0048471 "perinuclear region of cytoplasm" evidence=ISO]
[GO:0048511 "rhythmic process" evidence=IEA] [GO:0050765 "negative
regulation of phagocytosis" evidence=ISO] [GO:0051726 "regulation
of cell cycle" evidence=ISO] [GO:0051898 "negative regulation of
protein kinase B signaling cascade" evidence=ISO] [GO:0061099
"negative regulation of protein tyrosine kinase activity"
evidence=ISO] [GO:0090003 "regulation of establishment of protein
localization to plasma membrane" evidence=ISO] [GO:2001244
"positive regulation of intrinsic apoptotic signaling pathway"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:101849 GO:GO:0005634 GO:GO:0048471
GO:GO:0006915 GO:GO:0005080 GO:GO:0008104 GO:GO:0030308
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005856 GO:GO:0017148 GO:GO:0043547
GO:GO:0035556 GO:GO:0043025 GO:GO:0030425 GO:GO:0043204
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004872
GO:GO:0032880 GO:GO:0048511 GO:GO:0007049 GO:GO:0043065
GO:GO:0051726 GO:GO:0001891 GO:GO:0042169 GO:GO:0030335
GO:GO:0050765 GO:GO:0001934 GO:GO:0030496 GO:GO:0032436
GO:GO:0008200 GO:GO:0030971 GO:GO:0030178 GO:GO:2001244
GO:GO:0007369 GO:GO:0032464 GO:GO:2000114 EMBL:CH466575
GO:GO:0051302 GO:GO:2000543 GO:GO:0030292 KO:K14753 OMA:IRVWQVM
CTD:10399 GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277
OrthoDB:EOG4933J5 ChiTaRS:GNB2L1 GO:GO:0015935 EMBL:D29802
EMBL:X75313 EMBL:AK002493 EMBL:AK012242 EMBL:AK017772 EMBL:AK051226
EMBL:AK159797 EMBL:AK160528 EMBL:AK160739 EMBL:AK161234
EMBL:AK166417 EMBL:AK166786 EMBL:AK166800 EMBL:AK166889
EMBL:AK166945 EMBL:AK168086 EMBL:AK168096 EMBL:AK168196
EMBL:AK168349 EMBL:AL645849 EMBL:BC046760 EMBL:AF295529
IPI:IPI00317740 PIR:S38398 RefSeq:NP_032169.1 UniGene:Mm.5305
ProteinModelPortal:P68040 SMR:P68040 IntAct:P68040 STRING:P68040
REPRODUCTION-2DPAGE:P68040 SWISS-2DPAGE:P68040 PaxDb:P68040
PRIDE:P68040 Ensembl:ENSMUST00000020640 GeneID:14694 KEGG:mmu:14694
UCSC:uc007ipa.1 InParanoid:Q9CSQ0 NextBio:286639 Bgee:P68040
Genevestigator:P68040 GermOnline:ENSMUSG00000020372 Uniprot:P68040
Length = 317
Score = 102 (41.0 bits), Expect = 0.00059, Sum P(2) = 0.00059
Identities = 24/82 (29%), Positives = 43/82 (52%)
Query: 44 RELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVP 103
R GH V +++++S ++SGS D I +W+ + HS V C +F P
Sbjct: 99 RRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSP 158
Query: 104 ETSDELVVSGAGDAEVRLFNLS 125
+S+ ++VS D V+++NL+
Sbjct: 159 NSSNPIIVSCGWDKLVKVWNLA 180
Score = 59 (25.8 bits), Expect = 0.00059, Sum P(2) = 0.00059
Identities = 16/63 (25%), Positives = 30/63 (47%)
Query: 615 MKQRYVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAGNVI 674
+K ++GH T + G ASG DG+ +W+ G+ + L G G++I
Sbjct: 184 LKTNHIGH----TGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG---GDII 236
Query: 675 SSM 677
+++
Sbjct: 237 NAL 239
>RGD|69229 [details] [associations]
symbol:Gnb2l1 "guanine nucleotide binding protein (G protein),
beta polypeptide 2 like 1" species:10116 "Rattus norvegicus"
[GO:0001891 "phagocytic cup" evidence=ISO;ISS] [GO:0001934 "positive
regulation of protein phosphorylation" evidence=ISO;ISS] [GO:0005080
"protein kinase C binding" evidence=IC;ISO;IDA] [GO:0005634
"nucleus" evidence=ISO;ISS] [GO:0005737 "cytoplasm"
evidence=ISO;ISS] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0006919 "activation of cysteine-type endopeptidase activity
involved in apoptotic process" evidence=ISO] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0007205 "protein kinase C-activating
G-protein coupled receptor signaling pathway" evidence=TAS]
[GO:0007369 "gastrulation" evidence=IEA] [GO:0008200 "ion channel
inhibitor activity" evidence=IEA;ISO] [GO:0008656 "cysteine-type
endopeptidase activator activity involved in apoptotic process"
evidence=IEA;ISO] [GO:0015935 "small ribosomal subunit"
evidence=IDA] [GO:0017148 "negative regulation of translation"
evidence=IMP] [GO:0019903 "protein phosphatase binding"
evidence=IEA;ISO] [GO:0030178 "negative regulation of Wnt receptor
signaling pathway" evidence=ISS] [GO:0030292 "protein tyrosine
kinase inhibitor activity" evidence=ISO;ISS] [GO:0030308 "negative
regulation of cell growth" evidence=ISO;ISS] [GO:0030335 "positive
regulation of cell migration" evidence=ISO;ISS] [GO:0030425
"dendrite" evidence=IEA;ISO] [GO:0030496 "midbody" evidence=ISO;ISS]
[GO:0030971 "receptor tyrosine kinase binding" evidence=ISO;ISS]
[GO:0032436 "positive regulation of proteasomal ubiquitin-dependent
protein catabolic process" evidence=ISO;ISS] [GO:0032464 "positive
regulation of protein homooligomerization" evidence=ISO;ISS]
[GO:0032880 "regulation of protein localization" evidence=ISS]
[GO:0042169 "SH2 domain binding" evidence=ISO;ISS] [GO:0043025
"neuronal cell body" evidence=ISO;ISS] [GO:0043065 "positive
regulation of apoptotic process" evidence=ISO;ISS] [GO:0043204
"perikaryon" evidence=IEA] [GO:0043547 "positive regulation of
GTPase activity" evidence=ISO;ISS] [GO:0048471 "perinuclear region
of cytoplasm" evidence=ISO;ISS] [GO:0048511 "rhythmic process"
evidence=IEA] [GO:0050765 "negative regulation of phagocytosis"
evidence=ISO;ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:0051726 "regulation of cell cycle"
evidence=ISO;ISS] [GO:0051898 "negative regulation of protein kinase
B signaling cascade" evidence=IEA;ISO] [GO:0061099 "negative
regulation of protein tyrosine kinase activity" evidence=ISO]
[GO:0090003 "regulation of establishment of protein localization to
plasma membrane" evidence=IMP] [GO:2000114 "regulation of
establishment of cell polarity" evidence=ISS] [GO:2000543 "positive
regulation of gastrulation" evidence=ISS] [GO:2001244 "positive
regulation of intrinsic apoptotic signaling pathway"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:69229 GO:GO:0005634 GO:GO:0048471 GO:GO:0006915
GO:GO:0005080 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005856 GO:GO:0017148
GO:GO:0043547 GO:GO:0007205 GO:GO:0043025 GO:GO:0030425
GO:GO:0043204 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048511 GO:GO:0007049 GO:GO:0043065 GO:GO:0051726
GO:GO:0001891 GO:GO:0042169 GO:GO:0030335 GO:GO:0050765
GO:GO:0001934 GO:GO:0030496 GO:GO:0032436 GO:GO:0008200
GO:GO:0090003 GO:GO:0030971 GO:GO:0030178 GO:GO:2001244
GO:GO:0007369 GO:GO:0032464 GO:GO:2000114 GO:GO:0051302
GO:GO:2000543 GO:GO:0030292 HOGENOM:HOG000091643 KO:K14753 CTD:10399
GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277 OrthoDB:EOG4933J5
GO:GO:0015935 EMBL:U03390 EMBL:BC063809 IPI:IPI00231134 PIR:A36986
RefSeq:NP_570090.2 RefSeq:XP_003751228.1 UniGene:Rn.55487
ProteinModelPortal:P63245 SMR:P63245 IntAct:P63245 MINT:MINT-4095812
STRING:P63245 PhosphoSite:P63245 PRIDE:P63245
Ensembl:ENSRNOT00000003334 GeneID:100911540 GeneID:83427
KEGG:rno:100911540 KEGG:rno:83427 UCSC:RGD:69229 InParanoid:P63245
NextBio:615845 Genevestigator:P63245 GermOnline:ENSRNOG00000002390
Uniprot:P63245
Length = 317
Score = 102 (41.0 bits), Expect = 0.00059, Sum P(2) = 0.00059
Identities = 24/82 (29%), Positives = 43/82 (52%)
Query: 44 RELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVP 103
R GH V +++++S ++SGS D I +W+ + HS V C +F P
Sbjct: 99 RRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSP 158
Query: 104 ETSDELVVSGAGDAEVRLFNLS 125
+S+ ++VS D V+++NL+
Sbjct: 159 NSSNPIIVSCGWDKLVKVWNLA 180
Score = 59 (25.8 bits), Expect = 0.00059, Sum P(2) = 0.00059
Identities = 16/63 (25%), Positives = 30/63 (47%)
Query: 615 MKQRYVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAGNVI 674
+K ++GH T + G ASG DG+ +W+ G+ + L G G++I
Sbjct: 184 LKTNHIGH----TGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG---GDII 236
Query: 675 SSM 677
+++
Sbjct: 237 NAL 239
>UNIPROTKB|G8JL27 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9031 "Gallus gallus" [GO:0001891 "phagocytic
cup" evidence=IEA] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008200 "ion channel inhibitor activity" evidence=IEA]
[GO:0008656 "cysteine-type endopeptidase activator activity
involved in apoptotic process" evidence=IEA] [GO:0019903 "protein
phosphatase binding" evidence=IEA] [GO:0030292 "protein tyrosine
kinase inhibitor activity" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0030335 "positive
regulation of cell migration" evidence=IEA] [GO:0030425 "dendrite"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0030971
"receptor tyrosine kinase binding" evidence=IEA] [GO:0032436
"positive regulation of proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0032464 "positive regulation
of protein homooligomerization" evidence=IEA] [GO:0042169 "SH2
domain binding" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043547 "positive regulation of GTPase
activity" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0050765 "negative regulation of
phagocytosis" evidence=IEA] [GO:0051726 "regulation of cell cycle"
evidence=IEA] [GO:0051898 "negative regulation of protein kinase B
signaling cascade" evidence=IEA] [GO:2001244 "positive regulation
of intrinsic apoptotic signaling pathway" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 OMA:IRVWQVM
GeneTree:ENSGT00700000104461 EMBL:AADN02030122
Ensembl:ENSGALT00000000171 Uniprot:G8JL27
Length = 320
Score = 102 (41.0 bits), Expect = 0.00061, Sum P(2) = 0.00061
Identities = 24/82 (29%), Positives = 43/82 (52%)
Query: 44 RELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVP 103
R GH V +++++S ++SGS D I +W+ + HS V C +F P
Sbjct: 102 RRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSP 161
Query: 104 ETSDELVVSGAGDAEVRLFNLS 125
+S+ ++VS D V+++NL+
Sbjct: 162 NSSNPIIVSCGWDKLVKVWNLA 183
Score = 59 (25.8 bits), Expect = 0.00061, Sum P(2) = 0.00061
Identities = 16/63 (25%), Positives = 30/63 (47%)
Query: 615 MKQRYVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAGNVI 674
+K ++GH T + G ASG DG+ +W+ G+ + L G G++I
Sbjct: 187 LKTNHIGH----TGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG---GDII 239
Query: 675 SSM 677
+++
Sbjct: 240 NAL 242
>UNIPROTKB|I3LKT8 [details] [associations]
symbol:RBBP4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042826 "histone deacetylase binding" evidence=IEA]
[GO:0035098 "ESC/E(Z) complex" evidence=IEA] [GO:0033186 "CAF-1
complex" evidence=IEA] [GO:0031497 "chromatin assembly"
evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA] [GO:0016581
"NuRD complex" evidence=IEA] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006338
GO:GO:0031497 GO:GO:0016589 GO:GO:0033186
GeneTree:ENSGT00570000079069 OMA:CQPDLRL GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094 EMBL:FP312679
EMBL:FP325261 ProteinModelPortal:I3LKT8 PRIDE:I3LKT8
Ensembl:ENSSSCT00000023350 Uniprot:I3LKT8
Length = 390
Score = 119 (46.9 bits), Expect = 0.00061, P = 0.00061
Identities = 36/134 (26%), Positives = 63/134 (47%)
Query: 46 LEGHQGCVNAISWNSKGS-LLISGSDDTHINVWSYSSRKL-LHSIETGHSANVFCTKFVP 103
++ H VN +S+N +L +GS D + +W + KL LHS E+ H +F ++ P
Sbjct: 234 VDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFES-HKDEIFQVQWSP 292
Query: 104 ETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAIT--PSALY--QCHTRRVKKLAVEVGN 159
L SG D + +++LS+ ++A P L+ HT ++ +
Sbjct: 293 HNETILASSGT-DRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNE 351
Query: 160 PHVVWSASEDGTLR 173
P V+ S SED ++
Sbjct: 352 PWVICSVSEDNIMQ 365
>CGD|CAL0006083 [details] [associations]
symbol:TIF34 species:5476 "Candida albicans" [GO:0035690
"cellular response to drug" evidence=IMP] [GO:0016282 "eukaryotic
43S preinitiation complex" evidence=IEA] [GO:0071541 "eukaryotic
translation initiation factor 3 complex, eIF3m" evidence=IEA]
[GO:0043614 "multi-eIF complex" evidence=IEA] [GO:0071540
"eukaryotic translation initiation factor 3 complex, eIF3e"
evidence=IEA] [GO:0034399 "nuclear periphery" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0071470 "cellular response
to osmotic stress" evidence=IEA] [GO:0002188 "translation
reinitiation" evidence=IEA] [GO:0003743 "translation initiation
factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0006083 GO:GO:0005737
EMBL:AACQ01000017 EMBL:AACQ01000015 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319 GO:GO:0035690
GO:GO:0003743 KO:K03246 HAMAP:MF_03008 RefSeq:XP_721194.1
RefSeq:XP_721466.1 ProteinModelPortal:Q5AI86 STRING:Q5AI86
GeneID:3636872 GeneID:3637196 KEGG:cal:CaO19.10484
KEGG:cal:CaO19.2967 Uniprot:Q5AI86
Length = 350
Score = 104 (41.7 bits), Expect = 0.00063, Sum P(2) = 0.00063
Identities = 23/80 (28%), Positives = 43/80 (53%)
Query: 45 ELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPE 104
+L GH+ + + +N +G LL S + D ++W S+ + L ++E GH ++ PE
Sbjct: 5 KLMGHERSLTQVKYNREGDLLFSVAKDNAASIWYSSNGERLGTLE-GHQGVIWSIDVDPE 63
Query: 105 TSDELVVSGAGDAEVRLFNL 124
T L +G GD ++L+ +
Sbjct: 64 T--HLCATGGGDLAIKLWKV 81
Score = 58 (25.5 bits), Expect = 0.00063, Sum P(2) = 0.00063
Identities = 18/58 (31%), Positives = 28/58 (48%)
Query: 608 QPETVIDMKQRYVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKML 665
+P VI+ K G+ A + G GDYI G D+G ++ +TG+L+ L
Sbjct: 140 EPSLVIETKSE-------GSKATVAGWSGD-GDYIIVGHDNGYVSKYDSKTGKLVTSL 189
>UNIPROTKB|Q5AI86 [details] [associations]
symbol:TIF34 "Eukaryotic translation initiation factor 3
subunit I" species:237561 "Candida albicans SC5314" [GO:0035690
"cellular response to drug" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0006083 GO:GO:0005737
EMBL:AACQ01000017 EMBL:AACQ01000015 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319 GO:GO:0035690
GO:GO:0003743 KO:K03246 HAMAP:MF_03008 RefSeq:XP_721194.1
RefSeq:XP_721466.1 ProteinModelPortal:Q5AI86 STRING:Q5AI86
GeneID:3636872 GeneID:3637196 KEGG:cal:CaO19.10484
KEGG:cal:CaO19.2967 Uniprot:Q5AI86
Length = 350
Score = 104 (41.7 bits), Expect = 0.00063, Sum P(2) = 0.00063
Identities = 23/80 (28%), Positives = 43/80 (53%)
Query: 45 ELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPE 104
+L GH+ + + +N +G LL S + D ++W S+ + L ++E GH ++ PE
Sbjct: 5 KLMGHERSLTQVKYNREGDLLFSVAKDNAASIWYSSNGERLGTLE-GHQGVIWSIDVDPE 63
Query: 105 TSDELVVSGAGDAEVRLFNL 124
T L +G GD ++L+ +
Sbjct: 64 T--HLCATGGGDLAIKLWKV 81
Score = 58 (25.5 bits), Expect = 0.00063, Sum P(2) = 0.00063
Identities = 18/58 (31%), Positives = 28/58 (48%)
Query: 608 QPETVIDMKQRYVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKML 665
+P VI+ K G+ A + G GDYI G D+G ++ +TG+L+ L
Sbjct: 140 EPSLVIETKSE-------GSKATVAGWSGD-GDYIIVGHDNGYVSKYDSKTGKLVTSL 189
>UNIPROTKB|E1BWN2 [details] [associations]
symbol:E1BWN2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005814 "centriole" evidence=IEA] [GO:0005911
"cell-cell junction" evidence=IEA] [GO:0005912 "adherens junction"
evidence=IEA] [GO:0005932 "microtubule basal body" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0031513
"nonmotile primary cilium" evidence=IEA] [GO:0033365 "protein
localization to organelle" evidence=IEA] [GO:0060271 "cilium
morphogenesis" evidence=IEA] Pfam:PF00018 InterPro:IPR017986
InterPro:IPR001452 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PRINTS:PR00452 PROSITE:PS50002 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00326 GO:GO:0005814
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005911 SUPFAM:SSF50044 GO:GO:0005912
GO:GO:0033365 OMA:FKGIPIS GO:GO:0005932 GO:GO:0031513
GeneTree:ENSGT00530000063479 EMBL:AADN02025521 EMBL:AADN02025522
IPI:IPI00588508 Ensembl:ENSGALT00000022607 Uniprot:E1BWN2
Length = 1174
Score = 102 (41.0 bits), Expect = 0.00065, Sum P(2) = 0.00065
Identities = 23/81 (28%), Positives = 43/81 (53%)
Query: 44 RELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIET-GHSANVFCTKFV 102
RE GH V + W+ L++ S D + +W ++ + +++ H + V+ K+
Sbjct: 657 REFYGHLNIVYDLCWSKDSQHLLTASSDGTVRMWKIETQ-VASAVKVFPHPSFVYTAKYH 715
Query: 103 PETSDELVVSGAGDAEVRLFN 123
P +D LVV+G DA +R++N
Sbjct: 716 P-VADSLVVTGCYDAVIRVWN 735
Score = 73 (30.8 bits), Expect = 0.00065, Sum P(2) = 0.00065
Identities = 15/43 (34%), Positives = 25/43 (58%)
Query: 617 QRYVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTG 659
++Y+G N I S L G ++ SGS+DG+ ++W +TG
Sbjct: 843 KKYIGATNYREKIH--STLTPCGTFLFSGSEDGKAYVWNPETG 883
>ZFIN|ZDB-GENE-040426-1993 [details] [associations]
symbol:poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1993 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030030 HSSP:P16649
CTD:25886 HOVERGEN:HBG057502 KO:K16482 EMBL:BC045888
IPI:IPI00500664 RefSeq:NP_998214.1 UniGene:Dr.150982
ProteinModelPortal:Q7ZVF0 GeneID:406322 KEGG:dre:406322
NextBio:20817946 Uniprot:Q7ZVF0
Length = 416
Score = 125 (49.1 bits), Expect = 0.00065, Sum P(3) = 0.00065
Identities = 37/138 (26%), Positives = 62/138 (44%)
Query: 43 ERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFV 102
ER +GH+ + ++ ++ G + SGS D + VW+ + + TGH V C +F
Sbjct: 11 ERNFKGHRDAITSLDFSPSGKQIASGSVDASVMVWNMKPQSRAYRF-TGHKDAVTCVQFS 69
Query: 103 PETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVEVGNPHV 162
P S L+ S + D VRL+ + G + A T S C + + L + +
Sbjct: 70 P--SAHLLASSSRDKTVRLW-VPSVKGESVLFRAHTGSVRSVCFSADGQSLLTASDDQSI 126
Query: 163 -VWSASEDG---TLRQHD 176
+WS TLR+H+
Sbjct: 127 KLWSVHRQKIICTLREHN 144
Score = 38 (18.4 bits), Expect = 0.00065, Sum P(3) = 0.00065
Identities = 8/31 (25%), Positives = 17/31 (54%)
Query: 457 YKEALDFAIAAQCLDPSNSVMAEKVENIKKH 487
Y +DF ++ C+ ++S +V +I+ H
Sbjct: 188 YSSYVDFHPSSTCIATASSDNTVRVWDIRTH 218
Score = 38 (18.4 bits), Expect = 0.00065, Sum P(3) = 0.00065
Identities = 11/43 (25%), Positives = 18/43 (41%)
Query: 639 GDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAGNVISSMEECG 681
G+++ + S D I + GRL+ L G + S G
Sbjct: 240 GNHLLTASSDSTLKILDLLEGRLLYTLHGHQGSASCVSFSRSG 282
Score = 37 (18.1 bits), Expect = 0.00082, Sum P(3) = 0.00082
Identities = 11/36 (30%), Positives = 16/36 (44%)
Query: 619 YVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIW 654
Y H + G+ SF + GD AS D + +W
Sbjct: 264 YTLHGHQGS-ASCVSF-SRSGDQFASAGSDQQVMVW 297
>FB|FBgn0021874 [details] [associations]
symbol:Nle "Notchless" species:7227 "Drosophila melanogaster"
[GO:0007219 "Notch signaling pathway" evidence=ISS;TAS] [GO:0005112
"Notch binding" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005634 EMBL:AE014134
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0005112 GeneTree:ENSGT00690000102167 InterPro:IPR011047
SUPFAM:SSF50998 HSSP:P16649 PRINTS:PR00319 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 FlyBase:FBgn0021874 EMBL:AY089286
RefSeq:NP_477294.2 UniGene:Dm.13475 SMR:Q9VPR4 IntAct:Q9VPR4
MINT:MINT-291987 STRING:Q9VPR4 EnsemblMetazoa:FBtr0078075
GeneID:33234 KEGG:dme:Dmel_CG2863 UCSC:CG2863-RA CTD:33234
InParanoid:Q9VPR4 GenomeRNAi:33234 NextBio:782583 Uniprot:Q9VPR4
Length = 488
Score = 120 (47.3 bits), Expect = 0.00068, P = 0.00068
Identities = 25/75 (33%), Positives = 42/75 (56%)
Query: 48 GHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPETSD 107
GH V ++W++ L++SGS D+ + VWS ++KL + GH+ VF + P+ S
Sbjct: 415 GHVQAVYTVAWSADSRLIVSGSKDSTLKVWSVQTKKLAQELP-GHADEVFGVDWAPDGSR 473
Query: 108 ELVVSGAGDAEVRLF 122
V SG D ++L+
Sbjct: 474 --VASGGKDKVIKLW 486
>UNIPROTKB|F2Z4M0 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9031
"Gallus gallus" [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IEA]
[GO:0016581 "NuRD complex" evidence=IEA] [GO:0016589 "NURF complex"
evidence=IEA] [GO:0031497 "chromatin assembly" evidence=IEA]
[GO:0033186 "CAF-1 complex" evidence=IEA] [GO:0035098 "ESC/E(Z)
complex" evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006338
GO:GO:0031497 GO:GO:0016589 GO:GO:0033186
GeneTree:ENSGT00570000079069 OMA:CQPDLRL GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094 IPI:IPI00592914
EMBL:AADN02043764 ProteinModelPortal:F2Z4M0 SMR:F2Z4M0 PRIDE:F2Z4M0
Ensembl:ENSGALT00000005575 Uniprot:F2Z4M0
Length = 425
Score = 119 (46.9 bits), Expect = 0.00070, P = 0.00070
Identities = 36/134 (26%), Positives = 63/134 (47%)
Query: 46 LEGHQGCVNAISWNSKGS-LLISGSDDTHINVWSYSSRKL-LHSIETGHSANVFCTKFVP 103
++ H VN +S+N +L +GS D + +W + KL LHS E+ H +F ++ P
Sbjct: 269 VDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFES-HKDEIFQVQWSP 327
Query: 104 ETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAIT--PSALY--QCHTRRVKKLAVEVGN 159
L SG D + +++LS+ ++A P L+ HT ++ +
Sbjct: 328 HNETILASSGT-DRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNE 386
Query: 160 PHVVWSASEDGTLR 173
P V+ S SED ++
Sbjct: 387 PWVICSVSEDNIMQ 400
>UNIPROTKB|Q9W7I5 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9031
"Gallus gallus" [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0033186
"CAF-1 complex" evidence=ISS] [GO:0031497 "chromatin assembly"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0006338
"chromatin remodeling" evidence=ISS] [GO:0008094 "DNA-dependent
ATPase activity" evidence=ISS] [GO:0035098 "ESC/E(Z) complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0006338
GO:GO:0007049 GO:GO:0035098 GO:GO:0031497 GO:GO:0033186 KO:K10752
InterPro:IPR022052 Pfam:PF12265 HOGENOM:HOG000160330 CTD:5928
HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH EMBL:AF097750 IPI:IPI00592914
RefSeq:NP_990183.1 UniGene:Gga.1029 ProteinModelPortal:Q9W7I5
SMR:Q9W7I5 STRING:Q9W7I5 PRIDE:Q9W7I5 GeneID:395658 KEGG:gga:395658
InParanoid:Q9W7I5 NextBio:20815730 Uniprot:Q9W7I5
Length = 425
Score = 119 (46.9 bits), Expect = 0.00070, P = 0.00070
Identities = 36/134 (26%), Positives = 63/134 (47%)
Query: 46 LEGHQGCVNAISWNSKGS-LLISGSDDTHINVWSYSSRKL-LHSIETGHSANVFCTKFVP 103
++ H VN +S+N +L +GS D + +W + KL LHS E+ H +F ++ P
Sbjct: 269 VDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFES-HKDEIFQVQWSP 327
Query: 104 ETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAIT--PSALY--QCHTRRVKKLAVEVGN 159
L SG D + +++LS+ ++A P L+ HT ++ +
Sbjct: 328 HNETILASSGT-DRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNE 386
Query: 160 PHVVWSASEDGTLR 173
P V+ S SED ++
Sbjct: 387 PWVICSVSEDNIMQ 400
>UNIPROTKB|Q3MHL3 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9913
"Bos taurus" [GO:0031497 "chromatin assembly" evidence=ISS]
[GO:0033186 "CAF-1 complex" evidence=ISS] [GO:0035098 "ESC/E(Z)
complex" evidence=ISS] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA] [GO:0016581
"NuRD complex" evidence=IEA] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006260 "DNA replication" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0006338 GO:GO:0007049 GO:GO:0035098 GO:GO:0031497
GO:GO:0016589 GO:GO:0033186 GeneTree:ENSGT00570000079069 KO:K10752
OMA:CQPDLRL GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265
GO:GO:0008094 HOGENOM:HOG000160330 EMBL:BT030530 EMBL:BC105195
IPI:IPI00717704 RefSeq:NP_001070481.1 UniGene:Bt.101874
ProteinModelPortal:Q3MHL3 SMR:Q3MHL3 STRING:Q3MHL3 PRIDE:Q3MHL3
Ensembl:ENSBTAT00000007758 GeneID:767940 KEGG:bta:767940 CTD:5928
HOVERGEN:HBG053236 InParanoid:Q3MHL3 OrthoDB:EOG4DBTDH
NextBio:20918297 Uniprot:Q3MHL3
Length = 425
Score = 119 (46.9 bits), Expect = 0.00070, P = 0.00070
Identities = 36/134 (26%), Positives = 63/134 (47%)
Query: 46 LEGHQGCVNAISWNSKGS-LLISGSDDTHINVWSYSSRKL-LHSIETGHSANVFCTKFVP 103
++ H VN +S+N +L +GS D + +W + KL LHS E+ H +F ++ P
Sbjct: 269 VDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFES-HKDEIFQVQWSP 327
Query: 104 ETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAIT--PSALY--QCHTRRVKKLAVEVGN 159
L SG D + +++LS+ ++A P L+ HT ++ +
Sbjct: 328 HNETILASSGT-DRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNE 386
Query: 160 PHVVWSASEDGTLR 173
P V+ S SED ++
Sbjct: 387 PWVICSVSEDNIMQ 400
>UNIPROTKB|E2QXR8 [details] [associations]
symbol:RBBP4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0035098 "ESC/E(Z) complex" evidence=IEA]
[GO:0033186 "CAF-1 complex" evidence=IEA] [GO:0031497 "chromatin
assembly" evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA]
[GO:0016581 "NuRD complex" evidence=IEA] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006338
GO:GO:0031497 GO:GO:0016589 GO:GO:0033186
GeneTree:ENSGT00570000079069 KO:K10752 OMA:CQPDLRL GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094 CTD:5928
EMBL:AAEX03001654 RefSeq:XP_864445.1 ProteinModelPortal:E2QXR8
SMR:E2QXR8 PRIDE:E2QXR8 Ensembl:ENSCAFT00000016755 GeneID:478149
KEGG:cfa:478149 NextBio:20853518 Uniprot:E2QXR8
Length = 425
Score = 119 (46.9 bits), Expect = 0.00070, P = 0.00070
Identities = 36/134 (26%), Positives = 63/134 (47%)
Query: 46 LEGHQGCVNAISWNSKGS-LLISGSDDTHINVWSYSSRKL-LHSIETGHSANVFCTKFVP 103
++ H VN +S+N +L +GS D + +W + KL LHS E+ H +F ++ P
Sbjct: 269 VDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFES-HKDEIFQVQWSP 327
Query: 104 ETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAIT--PSALY--QCHTRRVKKLAVEVGN 159
L SG D + +++LS+ ++A P L+ HT ++ +
Sbjct: 328 HNETILASSGT-DRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNE 386
Query: 160 PHVVWSASEDGTLR 173
P V+ S SED ++
Sbjct: 387 PWVICSVSEDNIMQ 400
>UNIPROTKB|Q09028 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9606
"Homo sapiens" [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0016581 "NuRD complex" evidence=NAS;IDA] [GO:0016589 "NURF
complex" evidence=IDA] [GO:0035098 "ESC/E(Z) complex" evidence=IDA]
[GO:0033186 "CAF-1 complex" evidence=IDA] [GO:0031497 "chromatin
assembly" evidence=IDA] [GO:0008285 "negative regulation of cell
proliferation" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006338 "chromatin remodeling" evidence=IDA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IDA] [GO:0000278 "mitotic
cell cycle" evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0006334 "nucleosome assembly" evidence=TAS] [GO:0034080 "CENP-A
containing nucleosome assembly at centromere" evidence=TAS]
[GO:0016580 "Sin3 complex" evidence=NAS] [GO:0042393 "histone
binding" evidence=NAS] [GO:0042826 "histone deacetylase binding"
evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Pathway_Interaction_DB:telomerasepathway
Reactome:REACT_115566 GO:GO:0008285 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CH471059 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0035098
GO:GO:0042393 Pathway_Interaction_DB:hedgehog_glipathway
Pathway_Interaction_DB:smad2_3nuclearpathway GO:GO:0034080
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0000278
GO:GO:0016589 GO:GO:0033186 KO:K10752 OMA:CQPDLRL GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0016580 PDB:2XU7 PDBsum:2XU7
CTD:5928 HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH EMBL:X74262
EMBL:X71810 EMBL:BT007309 EMBL:AK299251 EMBL:AK312571 EMBL:AK222779
EMBL:AC114489 EMBL:BC003092 EMBL:BC015123 EMBL:BC053904
EMBL:BC075836 IPI:IPI00328319 IPI:IPI00645329 IPI:IPI00877802
IPI:IPI00877934 PIR:S36112 RefSeq:NP_001128727.1
RefSeq:NP_001128728.1 RefSeq:NP_005601.1 UniGene:Hs.16003 PDB:3GFC
PDBsum:3GFC ProteinModelPortal:Q09028 SMR:Q09028 DIP:DIP-33495N
IntAct:Q09028 MINT:MINT-90543 STRING:Q09028 PhosphoSite:Q09028
DMDM:1172846 PaxDb:Q09028 PRIDE:Q09028 DNASU:5928
Ensembl:ENST00000373485 Ensembl:ENST00000373493
Ensembl:ENST00000414241 Ensembl:ENST00000458695 GeneID:5928
KEGG:hsa:5928 UCSC:uc001bvr.3 UCSC:uc001bvs.3 GeneCards:GC01P033116
HGNC:HGNC:9887 HPA:CAB006264 MIM:602923 neXtProt:NX_Q09028
PharmGKB:PA34251 InParanoid:Q09028 PhylomeDB:Q09028 ChiTaRS:RBBP4
EvolutionaryTrace:Q09028 GenomeRNAi:5928 NextBio:23094
ArrayExpress:Q09028 Bgee:Q09028 CleanEx:HS_RBBP4
Genevestigator:Q09028 GermOnline:ENSG00000162521 Uniprot:Q09028
Length = 425
Score = 119 (46.9 bits), Expect = 0.00070, P = 0.00070
Identities = 36/134 (26%), Positives = 63/134 (47%)
Query: 46 LEGHQGCVNAISWNSKGS-LLISGSDDTHINVWSYSSRKL-LHSIETGHSANVFCTKFVP 103
++ H VN +S+N +L +GS D + +W + KL LHS E+ H +F ++ P
Sbjct: 269 VDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFES-HKDEIFQVQWSP 327
Query: 104 ETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAIT--PSALY--QCHTRRVKKLAVEVGN 159
L SG D + +++LS+ ++A P L+ HT ++ +
Sbjct: 328 HNETILASSGT-DRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNE 386
Query: 160 PHVVWSASEDGTLR 173
P V+ S SED ++
Sbjct: 387 PWVICSVSEDNIMQ 400
>UNIPROTKB|O93377 [details] [associations]
symbol:rbbp4-a "Histone-binding protein RBBP4-A"
species:8355 "Xenopus laevis" [GO:0031497 "chromatin assembly"
evidence=ISS] [GO:0033186 "CAF-1 complex" evidence=ISS] [GO:0035098
"ESC/E(Z) complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0007049 GO:GO:0035098 GO:GO:0031497 GO:GO:0033186 KO:K10752
InterPro:IPR022052 Pfam:PF12265 HOVERGEN:HBG053236 EMBL:AF073787
EMBL:BC077257 RefSeq:NP_001083811.1 UniGene:Xl.537
ProteinModelPortal:O93377 SMR:O93377 PRIDE:O93377 GeneID:399131
KEGG:xla:399131 CTD:399131 Xenbase:XB-GENE-482006 Uniprot:O93377
Length = 425
Score = 119 (46.9 bits), Expect = 0.00070, P = 0.00070
Identities = 36/134 (26%), Positives = 63/134 (47%)
Query: 46 LEGHQGCVNAISWNSKGS-LLISGSDDTHINVWSYSSRKL-LHSIETGHSANVFCTKFVP 103
++ H VN +S+N +L +GS D + +W + KL LHS E+ H +F ++ P
Sbjct: 269 VDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFES-HKDEIFQVQWSP 327
Query: 104 ETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAIT--PSALY--QCHTRRVKKLAVEVGN 159
L SG D + +++LS+ ++A P L+ HT ++ +
Sbjct: 328 HNETILASSGT-DRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNE 386
Query: 160 PHVVWSASEDGTLR 173
P V+ S SED ++
Sbjct: 387 PWVICSVSEDNIMQ 400
>UNIPROTKB|Q5M7K4 [details] [associations]
symbol:rbbp4 "Histone-binding protein RBBP4" species:8364
"Xenopus (Silurana) tropicalis" [GO:0031497 "chromatin assembly"
evidence=ISS] [GO:0033186 "CAF-1 complex" evidence=ISS] [GO:0035098
"ESC/E(Z) complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0016568 GO:GO:0007049 GO:GO:0035098 GO:GO:0031497
GO:GO:0033186 InterPro:IPR022052 Pfam:PF12265 HOGENOM:HOG000160330
HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH EMBL:BC088588 UniGene:Str.6093
ProteinModelPortal:Q5M7K4 SMR:Q5M7K4 STRING:Q5M7K4
Xenbase:XB-GENE-482002 InParanoid:Q5M7K4 Uniprot:Q5M7K4
Length = 425
Score = 119 (46.9 bits), Expect = 0.00070, P = 0.00070
Identities = 36/134 (26%), Positives = 63/134 (47%)
Query: 46 LEGHQGCVNAISWNSKGS-LLISGSDDTHINVWSYSSRKL-LHSIETGHSANVFCTKFVP 103
++ H VN +S+N +L +GS D + +W + KL LHS E+ H +F ++ P
Sbjct: 269 VDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFES-HKDEIFQVQWSP 327
Query: 104 ETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAIT--PSALY--QCHTRRVKKLAVEVGN 159
L SG D + +++LS+ ++A P L+ HT ++ +
Sbjct: 328 HNETILASSGT-DRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNE 386
Query: 160 PHVVWSASEDGTLR 173
P V+ S SED ++
Sbjct: 387 PWVICSVSEDNIMQ 400
>UNIPROTKB|Q5RF92 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9601
"Pongo abelii" [GO:0031497 "chromatin assembly" evidence=ISS]
[GO:0033186 "CAF-1 complex" evidence=ISS] [GO:0035098 "ESC/E(Z)
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568 GO:GO:0007049
GO:GO:0035098 GO:GO:0031497 GO:GO:0033186 KO:K10752
InterPro:IPR022052 Pfam:PF12265 CTD:5928 HOVERGEN:HBG053236
EMBL:CR857269 RefSeq:NP_001124686.1 UniGene:Pab.10290
UniGene:Pab.17706 ProteinModelPortal:Q5RF92 SMR:Q5RF92
GeneID:100461561 KEGG:pon:100461561 InParanoid:Q5RF92
Uniprot:Q5RF92
Length = 425
Score = 119 (46.9 bits), Expect = 0.00070, P = 0.00070
Identities = 36/134 (26%), Positives = 63/134 (47%)
Query: 46 LEGHQGCVNAISWNSKGS-LLISGSDDTHINVWSYSSRKL-LHSIETGHSANVFCTKFVP 103
++ H VN +S+N +L +GS D + +W + KL LHS E+ H +F ++ P
Sbjct: 269 VDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFES-HKDEIFQVQWSP 327
Query: 104 ETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAIT--PSALY--QCHTRRVKKLAVEVGN 159
L SG D + +++LS+ ++A P L+ HT ++ +
Sbjct: 328 HNETILASSGT-DRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNE 386
Query: 160 PHVVWSASEDGTLR 173
P V+ S SED ++
Sbjct: 387 PWVICSVSEDNIMQ 400
>UNIPROTKB|Q6INH0 [details] [associations]
symbol:rbbp4-b "Histone-binding protein RBBP4-B"
species:8355 "Xenopus laevis" [GO:0005634 "nucleus" evidence=ISS]
[GO:0006338 "chromatin remodeling" evidence=ISS] [GO:0031497
"chromatin assembly" evidence=ISS] [GO:0033186 "CAF-1 complex"
evidence=ISS] [GO:0035098 "ESC/E(Z) complex" evidence=ISS]
[GO:0008094 "DNA-dependent ATPase activity" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0006338 GO:GO:0007049 GO:GO:0035098
GO:GO:0031497 GO:GO:0033186 KO:K10752 InterPro:IPR022052
Pfam:PF12265 HOVERGEN:HBG053236 EMBL:BC072311 RefSeq:NP_001085185.1
UniGene:Xl.86906 ProteinModelPortal:Q6INH0 SMR:Q6INH0 PRIDE:Q6INH0
DNASU:432269 GeneID:432269 KEGG:xla:432269 CTD:432269
Xenbase:XB-GENE-6255728 Uniprot:Q6INH0
Length = 425
Score = 119 (46.9 bits), Expect = 0.00070, P = 0.00070
Identities = 36/134 (26%), Positives = 63/134 (47%)
Query: 46 LEGHQGCVNAISWNSKGS-LLISGSDDTHINVWSYSSRKL-LHSIETGHSANVFCTKFVP 103
++ H VN +S+N +L +GS D + +W + KL LHS E+ H +F ++ P
Sbjct: 269 VDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFES-HKDEIFQVQWSP 327
Query: 104 ETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAIT--PSALY--QCHTRRVKKLAVEVGN 159
L SG D + +++LS+ ++A P L+ HT ++ +
Sbjct: 328 HNETILASSGT-DRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNE 386
Query: 160 PHVVWSASEDGTLR 173
P V+ S SED ++
Sbjct: 387 PWVICSVSEDNIMQ 400
>MGI|MGI:1194912 [details] [associations]
symbol:Rbbp4 "retinoblastoma binding protein 4"
species:10090 "Mus musculus" [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=ISO;TAS] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0016581 "NuRD complex"
evidence=ISO;IDA] [GO:0016589 "NURF complex" evidence=ISO]
[GO:0031497 "chromatin assembly" evidence=ISO] [GO:0033186 "CAF-1
complex" evidence=ISO] [GO:0035098 "ESC/E(Z) complex"
evidence=ISO;IDA] [GO:0042826 "histone deacetylase binding"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1194912 EMBL:CH466552 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0006338 GO:GO:0007049
GO:GO:0035098 GO:GO:0031497 EMBL:AL607123 GO:GO:0016589
GO:GO:0033186 GeneTree:ENSGT00570000079069 KO:K10752 OMA:CQPDLRL
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094
HOGENOM:HOG000160330 CTD:5928 HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH
EMBL:U35141 EMBL:CU234133 EMBL:BC138568 EMBL:BC138570
IPI:IPI00828412 PIR:I49366 RefSeq:NP_033056.2 UniGene:Mm.12145
ProteinModelPortal:Q60972 SMR:Q60972 DIP:DIP-32855N IntAct:Q60972
STRING:Q60972 PhosphoSite:Q60972 REPRODUCTION-2DPAGE:Q60972
PaxDb:Q60972 PRIDE:Q60972 Ensembl:ENSMUST00000102598 GeneID:19646
KEGG:mmu:19646 InParanoid:A2A875 NextBio:296894 Bgee:Q60972
CleanEx:MM_RBBP4 Genevestigator:Q60972
GermOnline:ENSMUSG00000057236 Uniprot:Q60972
Length = 425
Score = 119 (46.9 bits), Expect = 0.00070, P = 0.00070
Identities = 36/134 (26%), Positives = 63/134 (47%)
Query: 46 LEGHQGCVNAISWNSKGS-LLISGSDDTHINVWSYSSRKL-LHSIETGHSANVFCTKFVP 103
++ H VN +S+N +L +GS D + +W + KL LHS E+ H +F ++ P
Sbjct: 269 VDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFES-HKDEIFQVQWSP 327
Query: 104 ETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAIT--PSALY--QCHTRRVKKLAVEVGN 159
L SG D + +++LS+ ++A P L+ HT ++ +
Sbjct: 328 HNETILASSGT-DRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNE 386
Query: 160 PHVVWSASEDGTLR 173
P V+ S SED ++
Sbjct: 387 PWVICSVSEDNIMQ 400
>RGD|1563620 [details] [associations]
symbol:RGD1563620 "similar to retinoblastoma binding protein 4"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1563620 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00570000079069
InterPro:IPR022052 Pfam:PF12265 OrthoDB:EOG4DBTDH IPI:IPI00368073
ProteinModelPortal:D4A250 Ensembl:ENSRNOT00000033132 Uniprot:D4A250
Length = 425
Score = 119 (46.9 bits), Expect = 0.00070, P = 0.00070
Identities = 36/127 (28%), Positives = 60/127 (47%)
Query: 53 VNAISWNSKGS-LLISGSDDTHINVWSYSSRKL-LHSIETGHSANVFCTKFVPETSDELV 110
VN +S+N +L SGS D + +W + KL LHS E+ H +F ++ P L
Sbjct: 276 VNCLSFNPNSEFILASGSPDKTVALWDLRNLKLKLHSFES-HKDEIFQVQWSPHNETILA 334
Query: 111 VSGAGDAEVRLFNLSRFSGRGLDDNAIT--PSALY--QCHTRRVKKLAVEVGNPHVVWSA 166
SG D + +++LS+ ++A P L+ HT ++ + P V+ S
Sbjct: 335 SSGT-DRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSV 393
Query: 167 SEDGTLR 173
SED ++
Sbjct: 394 SEDNIMQ 400
>RGD|1593768 [details] [associations]
symbol:Rbbp4 "retinoblastoma binding protein 4" species:10116
"Rattus norvegicus" [GO:0005634 "nucleus" evidence=ISO] [GO:0006338
"chromatin remodeling" evidence=IEA;ISO] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IEA;ISO] [GO:0016581 "NuRD complex"
evidence=IEA;ISO] [GO:0016589 "NURF complex" evidence=IEA;ISO]
[GO:0031497 "chromatin assembly" evidence=IEA;ISO] [GO:0033186
"CAF-1 complex" evidence=IEA;ISO] [GO:0035098 "ESC/E(Z) complex"
evidence=IEA;ISO] [GO:0042826 "histone deacetylase binding"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1593768 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006338 GO:GO:0031497
GO:GO:0016589 GO:GO:0033186 GeneTree:ENSGT00570000079069 KO:K10752
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094
EMBL:CH473968 HOGENOM:HOG000160330 CTD:5928 HOVERGEN:HBG053236
OrthoDB:EOG4DBTDH EMBL:BC168994 IPI:IPI00366789
RefSeq:NP_001101382.1 UniGene:Rn.224577 SMR:B5DFB2 STRING:B5DFB2
Ensembl:ENSRNOT00000029177 GeneID:313048 KEGG:rno:313048
NextBio:665530 Genevestigator:B5DFB2 Uniprot:B5DFB2
Length = 425
Score = 119 (46.9 bits), Expect = 0.00070, P = 0.00070
Identities = 36/134 (26%), Positives = 63/134 (47%)
Query: 46 LEGHQGCVNAISWNSKGS-LLISGSDDTHINVWSYSSRKL-LHSIETGHSANVFCTKFVP 103
++ H VN +S+N +L +GS D + +W + KL LHS E+ H +F ++ P
Sbjct: 269 VDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFES-HKDEIFQVQWSP 327
Query: 104 ETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAIT--PSALY--QCHTRRVKKLAVEVGN 159
L SG D + +++LS+ ++A P L+ HT ++ +
Sbjct: 328 HNETILASSGT-DRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNE 386
Query: 160 PHVVWSASEDGTLR 173
P V+ S SED ++
Sbjct: 387 PWVICSVSEDNIMQ 400
>ZFIN|ZDB-GENE-030131-848 [details] [associations]
symbol:rbb4l "retinoblastoma binding protein 4,
like" species:7955 "Danio rerio" [GO:0035098 "ESC/E(Z) complex"
evidence=ISS] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-030131-848 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568 GO:GO:0035098
GeneTree:ENSGT00570000079069 KO:K10752 InterPro:IPR022052
Pfam:PF12265 HOGENOM:HOG000160330 HOVERGEN:HBG053236
OrthoDB:EOG4DBTDH EMBL:BC052110 EMBL:BC067546 IPI:IPI00996854
RefSeq:NP_997775.1 UniGene:Dr.75908 ProteinModelPortal:Q7ZTY4
SMR:Q7ZTY4 STRING:Q7ZTY4 PRIDE:Q7ZTY4 Ensembl:ENSDART00000008144
GeneID:322129 KEGG:dre:322129 CTD:322129 NextBio:20807686
ArrayExpress:Q7ZTY4 Bgee:Q7ZTY4 Uniprot:Q7ZTY4
Length = 426
Score = 119 (46.9 bits), Expect = 0.00071, P = 0.00071
Identities = 36/134 (26%), Positives = 63/134 (47%)
Query: 46 LEGHQGCVNAISWNSKGS-LLISGSDDTHINVWSYSSRKL-LHSIETGHSANVFCTKFVP 103
++ H VN +S+N +L +GS D + +W + KL LHS E+ H +F ++ P
Sbjct: 269 VDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFES-HKDEIFQVQWSP 327
Query: 104 ETSDELVVSGAGDAEVRLFNLSRFSG-RGLDDNAITPSAL---YQCHTRRVKKLAVEVGN 159
L SG D + +++LS+ + +D P L + HT ++ +
Sbjct: 328 HNETILASSGT-DRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNE 386
Query: 160 PHVVWSASEDGTLR 173
P V+ S SED ++
Sbjct: 387 PWVICSVSEDNIMQ 400
>ASPGD|ASPL0000003533 [details] [associations]
symbol:AN6867 species:162425 "Emericella nidulans"
[GO:0000002 "mitochondrial genome maintenance" evidence=IEA]
[GO:0000266 "mitochondrial fission" evidence=IEA] [GO:0016559
"peroxisome fission" evidence=IEA] [GO:0005741 "mitochondrial outer
membrane" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005741 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001301 EMBL:AACD01000113 HOGENOM:HOG000048466
OrthoDB:EOG469V30 RefSeq:XP_664471.1 HSSP:P46680
ProteinModelPortal:Q5AXW3 STRING:Q5AXW3
EnsemblFungi:CADANIAT00007667 GeneID:2870567 KEGG:ani:AN6867.2
OMA:CVQTLDV Uniprot:Q5AXW3
Length = 654
Score = 121 (47.7 bits), Expect = 0.00072, Sum P(2) = 0.00072
Identities = 53/193 (27%), Positives = 87/193 (45%)
Query: 6 FHDGSIYDMLDT-RHTDTRPDVNHSLQ-MHSSLVRRLSQERELEGHQGCVNAISWNSK-G 62
F SIY L + R R S+ +H S+ +E + H V A+ + G
Sbjct: 280 FMSESIYQKLPSPRSLKHRSIRKRSMPVLHEHFAPG-SEIKEFQAHTDVVTALDLDYPFG 338
Query: 63 SLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPETSDELVVSGAGDAEVRLF 122
+++ + DDT + VW + + +E GH+A+V C + D +V +G+ DA V+L+
Sbjct: 339 TMITAALDDT-VRVWDLNIGRCTGFLE-GHNASVRCLQI----EDNVVATGSMDATVKLW 392
Query: 123 NLSRFS--------GRGLDDNAIT---PSALYQCHTRRVKKLAVEVGNPH----VVWSAS 167
+LSR + DD+A++ ++L CH + EV H + S S
Sbjct: 393 DLSRARTTHRDNRVNKDEDDDAVSVAYSTSLEDCHVYSLDAHVGEVTALHFKGNTLVSGS 452
Query: 168 EDGTLRQHDFRQG 180
D TLR D +G
Sbjct: 453 ADKTLRHWDLVKG 465
Score = 47 (21.6 bits), Expect = 0.00072, Sum P(2) = 0.00072
Identities = 8/26 (30%), Positives = 18/26 (69%)
Query: 642 IASGSDDGRWFIWEKQTGRLIKMLLG 667
+A G+ DG +W+ ++G++ + L+G
Sbjct: 513 LACGTADGMVRLWDLRSGQVHRSLVG 538
>WB|WBGene00009542 [details] [associations]
symbol:F38E11.5 species:6239 "Caenorhabditis elegans"
[GO:0006886 "intracellular protein transport" evidence=IEA;IMP]
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0000003 "reproduction"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0032940 "secretion by cell" evidence=IMP]
[GO:0006915 "apoptotic process" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0048599 "oocyte development" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0009792 GO:GO:0006898 GO:GO:0006915
GO:GO:0006886 GO:GO:0002119 GO:GO:0032940 GO:GO:0030117
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005198
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0048599
HOGENOM:HOG000163444 InterPro:IPR016453 PIRSF:PIRSF005567
EMBL:Z68342 PIR:T21970 RefSeq:NP_501671.1 ProteinModelPortal:Q20168
SMR:Q20168 IntAct:Q20168 STRING:Q20168 PaxDb:Q20168 PRIDE:Q20168
EnsemblMetazoa:F38E11.5 GeneID:177779 KEGG:cel:CELE_F38E11.5
UCSC:F38E11.5 CTD:177779 WormBase:F38E11.5
GeneTree:ENSGT00640000091529 InParanoid:Q20168 OMA:LRNKAFG
NextBio:898348 GO:GO:0030663 Uniprot:Q20168
Length = 1000
Score = 129 (50.5 bits), Expect = 0.00074, Sum P(2) = 0.00074
Identities = 27/84 (32%), Positives = 50/84 (59%)
Query: 46 LEGHQGCVNAISWNSKGS--LLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVP 103
LEGH+ VN + + G +ISG+DD + +W Y ++ + +++ GH+ NV F P
Sbjct: 181 LEGHEKGVNCVDYYHGGEKPYIISGADDHLVKIWDYQNKTCVQTLD-GHAQNVSSVCFHP 239
Query: 104 ETSDELVVSGAGDAEVRLFNLSRF 127
E L+++G+ D+ VRL++ + +
Sbjct: 240 ELP--LIITGSEDSTVRLWHANTY 261
Score = 43 (20.2 bits), Expect = 0.00074, Sum P(2) = 0.00074
Identities = 9/35 (25%), Positives = 18/35 (51%)
Query: 269 PMHLSEHGRSSLHLTHVTFSPNGEEVLLSYSGEHV 303
P+ + + G S ++ + S NG V+ GE++
Sbjct: 345 PLSVKDLGSSEIYPQTLAHSSNGRFVVACGDGEYI 379
>POMBASE|SPCC16A11.02 [details] [associations]
symbol:utp13 "U3 snoRNP-associated protein Utp13
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005730
"nucleolus" evidence=IEA] [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=ISO] [GO:0030490 "maturation of
SSU-rRNA" evidence=ISO] [GO:0030515 "snoRNA binding" evidence=ISO]
[GO:0032040 "small-subunit processome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPCC16A11.02 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0030515 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0032040 GO:GO:0030490 GO:GO:0005732 HOGENOM:HOG000188765
KO:K14555 OMA:HHFRGSP PIR:T41075 RefSeq:NP_587989.2
ProteinModelPortal:Q9USN3 STRING:Q9USN3 EnsemblFungi:SPCC16A11.02.1
GeneID:2539337 KEGG:spo:SPCC16A11.02 OrthoDB:EOG4DZ53K
NextBio:20800502 Uniprot:Q9USN3
Length = 777
Score = 113 (44.8 bits), Expect = 0.00075, Sum P(2) = 0.00075
Identities = 38/155 (24%), Positives = 77/155 (49%)
Query: 48 GHQGCVNAISWNSKGS--LLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPET 105
GH G ++A+ + + +L SG+DD+ + +W +S + + E GHS+ + F P
Sbjct: 143 GHGGVISALCFGKHQNTWVLASGADDSRVRLWDLNSSRSMAVFE-GHSSVIRGLTFEPTG 201
Query: 106 SDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVEVGNPH--VV 163
S ++SG+ D V+++N+ + S A+ ++ H+ V+ + G P ++
Sbjct: 202 S--FLLSGSRDKTVQVWNIKKRS-------AVRTIPVF--HS--VEAIGWVNGQPEEKIL 248
Query: 164 WSASEDGTLRQHDFRQGSSCPPA-GSSHQECRNIL 197
++A E + D++ GS P ++H E I+
Sbjct: 249 YTAGEGNLILAWDWKSGSRLDPGVDTTHSETNAII 283
Score = 57 (25.1 bits), Expect = 0.00075, Sum P(2) = 0.00075
Identities = 12/33 (36%), Positives = 17/33 (51%)
Query: 639 GDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAG 671
G IAS S D +W+ TG ++ +L G G
Sbjct: 477 GRIIASASQDKTIKLWDSSTGEVVGVLRGHRRG 509
>ZFIN|ZDB-GENE-030131-445 [details] [associations]
symbol:rbb4 "retinoblastoma binding protein 4"
species:7955 "Danio rerio" [GO:0033186 "CAF-1 complex"
evidence=ISS] [GO:0031497 "chromatin assembly" evidence=ISS]
[GO:0008094 "DNA-dependent ATPase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0006338 "chromatin
remodeling" evidence=ISS] [GO:0035098 "ESC/E(Z) complex"
evidence=ISS] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-030131-445
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BX465206
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
IPI:IPI00995625 Ensembl:ENSDART00000130326 ArrayExpress:E7FEX2
Bgee:E7FEX2 Uniprot:E7FEX2
Length = 444
Score = 119 (46.9 bits), Expect = 0.00075, P = 0.00075
Identities = 36/134 (26%), Positives = 63/134 (47%)
Query: 46 LEGHQGCVNAISWNSKGS-LLISGSDDTHINVWSYSSRKL-LHSIETGHSANVFCTKFVP 103
++ H VN +S+N +L +GS D + +W + KL LHS E+ H +F ++ P
Sbjct: 269 VDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFES-HKDEIFQVQWSP 327
Query: 104 ETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAIT--PSALY--QCHTRRVKKLAVEVGN 159
L SG D + +++LS+ ++A P L+ HT ++ +
Sbjct: 328 HNETILASSGT-DRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNE 386
Query: 160 PHVVWSASEDGTLR 173
P V+ S SED ++
Sbjct: 387 PWVICSVSEDNIMQ 400
>ZFIN|ZDB-GENE-031118-54 [details] [associations]
symbol:poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0042384 "cilium assembly" evidence=ISS]
[GO:0060287 "epithelial cilium movement involved in determination
of left/right asymmetry" evidence=IMP] [GO:0060271 "cilium
morphogenesis" evidence=IMP] [GO:0003014 "renal system process"
evidence=IMP] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-031118-54 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042384 GO:GO:0003014
GO:GO:0060287 EMBL:CT033837 GeneTree:ENSGT00700000104282
HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743 EMBL:AY422998
EMBL:CR405685 EMBL:BC055275 IPI:IPI00506502 RefSeq:NP_956412.1
UniGene:Dr.26707 ProteinModelPortal:A2CEH0
Ensembl:ENSDART00000004771 GeneID:386932 KEGG:dre:386932 CTD:282809
InParanoid:Q6TEQ1 OMA:DENQEER OrthoDB:EOG41VK2R NextBio:20814079
Bgee:A2CEH0 Uniprot:A2CEH0
Length = 490
Score = 110 (43.8 bits), Expect = 0.00076, Sum P(2) = 0.00076
Identities = 24/79 (30%), Positives = 41/79 (51%)
Query: 47 EGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPETS 106
+ H V ++ ++ G L++ SDD + VW +K L+S+ H+ V C +F P+
Sbjct: 99 KAHTASVRSVHFSRDGQRLVTASDDKSVKVWGVERKKFLYSLNR-HTNWVRCARFSPD-- 155
Query: 107 DELVVSGAGDAEVRLFNLS 125
L+ S D VRL++ S
Sbjct: 156 GRLIASCGDDRTVRLWDTS 174
Score = 55 (24.4 bits), Expect = 0.00076, Sum P(2) = 0.00076
Identities = 31/107 (28%), Positives = 43/107 (40%)
Query: 569 HGSLNVRIHRRGDSARETVDANXXXXXXXXXXQNDRIPYQPETVIDMKQRYVGHCNVGTD 628
H +N+ G SA VD N ++ I + Q Y H N G +
Sbjct: 176 HQCINI-FTDYGGSAT-FVDFNSSGTCIASSGADNTIKIWDIRTNKLIQHYKVH-NAGVN 232
Query: 629 IKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAGNVIS 675
SF G+Y+ SGS D I + GRLI L G + G V++
Sbjct: 233 C--FSF-HPSGNYLISGSSDSTIKILDLLEGRLIYTLHGHK-GPVLT 275
>UNIPROTKB|Q5TFK1 [details] [associations]
symbol:EIF3I "Eukaryotic translation initiation factor 3
subunit I" species:9606 "Homo sapiens" [GO:0005852 "eukaryotic
translation initiation factor 3 complex" evidence=IEA] [GO:0006413
"translational initiation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0003743 EMBL:AL049795
HOGENOM:HOG000231322 OrthoDB:EOG4HX519 UniGene:Hs.530096
HGNC:HGNC:3272 ChiTaRS:EIF3I EMBL:AL121991 IPI:IPI00642205
SMR:Q5TFK1 STRING:Q5TFK1 Ensembl:ENST00000355082 HOVERGEN:HBG104529
Uniprot:Q5TFK1
Length = 125
Score = 96 (38.9 bits), Expect = 0.00078, P = 0.00078
Identities = 24/78 (30%), Positives = 40/78 (51%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPET 105
L+GH+ + I +N +G LL + + D +NVW YS GH+ V+C +T
Sbjct: 6 LQGHERSITQIKYNREGDLLFTVAKDPIVNVW-YSVNGERLGTYMGHTGAVWCVDADWDT 64
Query: 106 SDELVVSGAGDAEVRLFN 123
V++G+ D RL++
Sbjct: 65 KH--VLTGSADNSCRLWD 80
>UNIPROTKB|Q6PBD6 [details] [associations]
symbol:wdr61 "WD repeat-containing protein 61" species:8364
"Xenopus (Silurana) tropicalis" [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0016593 "Cdc73/Paf1
complex" evidence=ISS] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=ISS] [GO:0035327 "transcriptionally active chromatin"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0051571
"positive regulation of histone H3-K4 methylation" evidence=ISS]
[GO:0055087 "Ski complex" evidence=ISS] [GO:0080182 "histone H3-K4
trimethylation" evidence=ISS] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0051571 GO:GO:0032968 GO:GO:0080182 GO:GO:0016593
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW EMBL:BC059759 RefSeq:NP_988871.1 UniGene:Str.5901
ProteinModelPortal:Q6PBD6 Ensembl:ENSXETT00000020997 GeneID:394466
KEGG:xtr:394466 Xenbase:XB-GENE-5751496 InParanoid:Q6PBD6
Bgee:Q6PBD6 Uniprot:Q6PBD6
Length = 305
Score = 103 (41.3 bits), Expect = 0.00081, Sum P(2) = 0.00081
Identities = 24/86 (27%), Positives = 45/86 (52%)
Query: 39 RLSQERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFC 98
RL + LEGHQ V ++ + G+++ S S D HI +W S K + +I+ G + +
Sbjct: 53 RLELQSTLEGHQLGVVSVDVSPSGNIMASSSLDAHIRLWDLESGKQIRAIDAG-PVDAWS 111
Query: 99 TKFVPETSDELVVSGAGDAEVRLFNL 124
F P++ + +G+ +V +F +
Sbjct: 112 VAFSPDSQH--LATGSHVGKVNIFGV 135
Score = 103 (41.3 bits), Expect = 0.00081, Sum P(2) = 0.00081
Identities = 31/92 (33%), Positives = 48/92 (52%)
Query: 44 RELEGHQGCVNAISW--NSK-GS-LLISGSDDTHINVWSYSSRKL-LHSIETGHSANVFC 98
++ H+ + ++ W NS GS L+ISGS D + VW +S +L L S GH V
Sbjct: 10 KQEHAHEDAIWSVGWGKNSNDGSELVISGSLDDLVKVWKWSDERLELQSTLEGHQLGVVS 69
Query: 99 TKFVPETSDELVVSGAGDAEVRLFNLSRFSGR 130
P S ++ S + DA +RL++L SG+
Sbjct: 70 VDVSP--SGNIMASSSLDAHIRLWDLE--SGK 97
Score = 56 (24.8 bits), Expect = 0.00081, Sum P(2) = 0.00081
Identities = 13/29 (44%), Positives = 19/29 (65%)
Query: 639 GDYIASGSDDGRWFIWEKQTGRLIKMLLG 667
G Y+ASG+ DG I++ TG+L+ L G
Sbjct: 160 GKYLASGAIDGIINIFDIATGKLLHTLEG 188
>UNIPROTKB|F1N9W1 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001570 "vasculogenesis" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0006974 "response
to DNA damage stimulus" evidence=IEA] [GO:0007062 "sister chromatid
cohesion" evidence=IEA] [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0030324 "lung development" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=IEA] [GO:0034644 "cellular response to
UV" evidence=IEA] [GO:0045741 "positive regulation of epidermal
growth factor-activated receptor activity" evidence=IEA]
[GO:0050821 "protein stabilization" evidence=IEA] [GO:0070374
"positive regulation of ERK1 and ERK2 cascade" evidence=IEA]
[GO:2000060 "positive regulation of protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849
OMA:EECLHTL EMBL:AADN02016174 IPI:IPI00582326
Ensembl:ENSGALT00000016428 Uniprot:F1N9W1
Length = 587
Score = 105 (42.0 bits), Expect = 0.00082, Sum P(2) = 0.00082
Identities = 27/83 (32%), Positives = 49/83 (59%)
Query: 44 RELEGHQGCVNAISWNS--KGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKF 101
R L GH G V W+S + +++ISGS D + VW+ + + +H++ GH++ V C
Sbjct: 295 RTLVGHTGGV----WSSQMRDNIIISGSTDRTLKVWNAETGECIHTLY-GHTSTVRCMHL 349
Query: 102 VPETSDELVVSGAGDAEVRLFNL 124
++ VVSG+ DA +R++++
Sbjct: 350 ----HEKRVVSGSRDATLRVWDI 368
Score = 62 (26.9 bits), Expect = 0.00082, Sum P(2) = 0.00082
Identities = 11/32 (34%), Positives = 21/32 (65%)
Query: 640 DYIASGSDDGRWFIWEKQTGRLIKMLLGDEAG 671
+++ + SDDG +W+ +TG I+ L+ E+G
Sbjct: 515 NFVITSSDDGTVKLWDLKTGEFIRNLVTLESG 546
>RGD|2321145 [details] [associations]
symbol:Fbxw7 "F-box and WD repeat domain containing 7, E3
ubiquitin protein ligase" species:10116 "Rattus norvegicus"
[GO:0001570 "vasculogenesis" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0005654
"nucleoplasm" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0005783 "endoplasmic reticulum" evidence=ISO] [GO:0005794
"Golgi apparatus" evidence=ISO] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0006974 "response
to DNA damage stimulus" evidence=ISO] [GO:0007062 "sister chromatid
cohesion" evidence=ISO] [GO:0007219 "Notch signaling pathway"
evidence=ISO] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISO]
[GO:0030324 "lung development" evidence=ISO] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=ISO] [GO:0034644 "cellular response to
UV" evidence=ISO] [GO:0043234 "protein complex" evidence=ISO]
[GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISO] [GO:0050821
"protein stabilization" evidence=ISO] [GO:0070374 "positive
regulation of ERK1 and ERK2 cascade" evidence=ISO] [GO:2000060
"positive regulation of protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 RGD:2321145
GO:GO:0005783 GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219
GO:GO:0045741 GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974
GO:GO:0016567 GO:GO:0019005 GO:GO:0034644 GO:GO:0032876
GO:GO:2000060 GO:GO:0031146 GO:GO:0007062
GeneTree:ENSGT00690000101849 OrthoDB:EOG4MKNFW IPI:IPI00212282
ProteinModelPortal:D3ZQU4 Ensembl:ENSRNOT00000015279
UCSC:RGD:2321145 ArrayExpress:D3ZQU4 Uniprot:D3ZQU4
Length = 588
Score = 105 (42.0 bits), Expect = 0.00082, Sum P(2) = 0.00082
Identities = 27/83 (32%), Positives = 49/83 (59%)
Query: 44 RELEGHQGCVNAISWNS--KGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKF 101
R L GH G V W+S + +++ISGS D + VW+ + + +H++ GH++ V C
Sbjct: 337 RTLVGHTGGV----WSSQMRDNIIISGSTDRTLKVWNAETGECIHTLY-GHTSTVRCMHL 391
Query: 102 VPETSDELVVSGAGDAEVRLFNL 124
++ VVSG+ DA +R++++
Sbjct: 392 ----HEKRVVSGSRDATLRVWDI 410
Score = 62 (26.9 bits), Expect = 0.00082, Sum P(2) = 0.00082
Identities = 11/32 (34%), Positives = 21/32 (65%)
Query: 640 DYIASGSDDGRWFIWEKQTGRLIKMLLGDEAG 671
+++ + SDDG +W+ +TG I+ L+ E+G
Sbjct: 557 NFVITSSDDGTVKLWDLKTGEFIRNLVTLESG 588
>DICTYBASE|DDB_G0278945 [details] [associations]
symbol:DDB_G0278945 "WD repeat-containing protein 82"
species:44689 "Dictyostelium discoideum" [GO:0030587 "sorocarp
development" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0278945 Gene3D:2.130.10.10
SUPFAM:SSF50978 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030587 EMBL:AAFI02000024 KO:K14962 OMA:CTNMAFW
RefSeq:XP_641992.1 ProteinModelPortal:Q54XN8 STRING:Q54XN8
EnsemblProtists:DDB0218126 GeneID:8621724 KEGG:ddi:DDB_G0278945
InParanoid:Q54XN8 ProtClustDB:CLSZ2729103 Uniprot:Q54XN8
Length = 319
Score = 82 (33.9 bits), Expect = 0.00086, Sum P(2) = 0.00086
Identities = 33/151 (21%), Positives = 71/151 (47%)
Query: 29 SLQMHSSLVRRLSQER-ELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHS 87
+L++ ++V+ + + + + +N++ +N GSLLI+ SDD I++++ + +L +
Sbjct: 4 TLRLTDNVVQNMGIGKLHKDDNSSVINSMDFNKDGSLLITASDDESIHLYNIDTGELQKT 63
Query: 88 IETGHSANVFCTKFVPETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHT 147
+ + V KF ++ ++ + + L LS L DN ++ H
Sbjct: 64 LNS-KKYGVDLIKFT-HNNNSIICASKNSWDESLRYLS------LHDNKYLK--YFKGHR 113
Query: 148 RRVKKLAVEVGNPHVVWSASEDGTLRQHDFR 178
+V +++ N + S S D T+R D R
Sbjct: 114 NKVVSISMSPINDMFL-SGSLDDTIRMWDLR 143
Score = 79 (32.9 bits), Expect = 0.00086, Sum P(2) = 0.00086
Identities = 17/46 (36%), Positives = 25/46 (54%)
Query: 614 DMKQRYVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTG 659
++KQRY N + ++SF Y+ SGS+DG IW+ TG
Sbjct: 233 EVKQRYTSFKNDNGSVIESSF-SPDAQYVLSGSEDGTVHIWKTLTG 277
>TAIR|locus:2165700 [details] [associations]
symbol:AT5G42010 "AT5G42010" species:3702 "Arabidopsis
thaliana" [GO:0004871 "signal transducer activity" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007165 "signal transduction"
evidence=ISS] [GO:0030968 "endoplasmic reticulum unfolded protein
response" evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002688 GenomeReviews:BA000015_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AB017067 HSSP:P16649 UniGene:At.30194 HOGENOM:HOG000239143
ProtClustDB:CLSN2679320 IPI:IPI00537904 RefSeq:NP_199016.1
ProteinModelPortal:Q9FHY2 SMR:Q9FHY2 STRING:Q9FHY2
EnsemblPlants:AT5G42010.1 GeneID:834206 KEGG:ath:AT5G42010
TAIR:At5g42010 InParanoid:Q9FHY2 OMA:SESTCAV PhylomeDB:Q9FHY2
Genevestigator:Q9FHY2 Uniprot:Q9FHY2
Length = 709
Score = 121 (47.7 bits), Expect = 0.00089, P = 0.00089
Identities = 28/85 (32%), Positives = 46/85 (54%)
Query: 43 ERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFV 102
+ E GH G + +SW+ KG LL S D+T + +W S + + H + V C F
Sbjct: 356 QHEFRGHTGEILDLSWSEKGFLLSSSVDET-VRLWRVGSSDECIRVFS-HKSFVTCVAFN 413
Query: 103 PETSDELVVSGAGDAEVRLFNLSRF 127
P D +SG+ D +VR++++S+F
Sbjct: 414 P-VDDNYFISGSIDGKVRIWDVSQF 437
>FB|FBgn0030365 [details] [associations]
symbol:Tango4 "Transport and Golgi organization 4"
species:7227 "Drosophila melanogaster" [GO:0003674
"molecular_function" evidence=ND] [GO:0009306 "protein secretion"
evidence=IMP] [GO:0005829 "cytosol" evidence=IDA] [GO:0007030
"Golgi organization" evidence=IMP] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0071011 "precatalytic spliceosome"
evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005829 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0009306 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 GO:GO:0007030 HSSP:P16649
GeneTree:ENSGT00700000104496 KO:K12862 OMA:ITAEADK EMBL:AY051707
RefSeq:NP_572778.1 UniGene:Dm.4503 SMR:Q9VYQ9 MINT:MINT-757865
STRING:Q9VYQ9 EnsemblMetazoa:FBtr0073622 GeneID:32168
KEGG:dme:Dmel_CG1796 UCSC:CG1796-RA CTD:32168 FlyBase:FBgn0030365
InParanoid:Q9VYQ9 OrthoDB:EOG4C2FRR GenomeRNAi:32168 NextBio:777227
Uniprot:Q9VYQ9
Length = 482
Score = 111 (44.1 bits), Expect = 0.00091, Sum P(2) = 0.00091
Identities = 38/153 (24%), Positives = 65/153 (42%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPET 105
L GH V ++ ++K L S +D + W K++ GH + V+ P T
Sbjct: 210 LTGHVSTVRGVAVSTKHPYLFSCGEDRQVKCWDLEYNKVIRHYH-GHLSAVYSLALHP-T 267
Query: 106 SDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVEVGNPHVVWS 165
D L SG D+ R++++ + N T + HT V + + NP ++ +
Sbjct: 268 IDVLATSGR-DSTARIWDMRTKA------NVHTLTG----HTNTVASVVAQATNPQII-T 315
Query: 166 ASEDGTLRQHDFRQGSSCPPAGSSHQECRNILL 198
S D T+R D G S + + R+I+L
Sbjct: 316 GSHDSTVRLWDLAAGKSVCTLTNHKKSVRSIVL 348
Score = 53 (23.7 bits), Expect = 0.00091, Sum P(2) = 0.00091
Identities = 12/42 (28%), Positives = 20/42 (47%)
Query: 618 RYVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTG 659
++V + + T I G + SG D+G F W+ +TG
Sbjct: 372 KFVQNISGHTSIVNCMAANSEG-VLVSGGDNGTMFFWDWRTG 412
>FB|FBgn0263979 [details] [associations]
symbol:Caf1 "Chromatin assembly factor 1 subunit"
species:7227 "Drosophila melanogaster" [GO:0016584 "nucleosome
positioning" evidence=IDA] [GO:0042826 "histone deacetylase
binding" evidence=ISS;IDA] [GO:0031497 "chromatin assembly"
evidence=ISS;IDA] [GO:0033186 "CAF-1 complex" evidence=IDA]
[GO:0005634 "nucleus" evidence=NAS;IDA] [GO:0042393 "histone
binding" evidence=IDA;NAS;TAS] [GO:0016590 "ACF complex"
evidence=IDA] [GO:0006281 "DNA repair" evidence=TAS] [GO:0006334
"nucleosome assembly" evidence=NAS;IDA] [GO:0016573 "histone
acetylation" evidence=ISS;IDA] [GO:0016589 "NURF complex"
evidence=NAS;TAS;IPI] [GO:0035035 "histone acetyltransferase
binding" evidence=ISS;IPI] [GO:0005700 "polytene chromosome"
evidence=IDA] [GO:0042766 "nucleosome mobilization" evidence=IDA]
[GO:0006335 "DNA replication-dependent nucleosome assembly"
evidence=NAS] [GO:0003682 "chromatin binding" evidence=NAS]
[GO:0006342 "chromatin silencing" evidence=IPI] [GO:0006351
"transcription, DNA-dependent" evidence=IDA] [GO:0007346
"regulation of mitotic cell cycle" evidence=IMP] [GO:0046976
"histone methyltransferase activity (H3-K27 specific)" evidence=IC]
[GO:0046974 "histone methyltransferase activity (H3-K9 specific)"
evidence=IC] [GO:0016571 "histone methylation" evidence=IDA]
[GO:0035098 "ESC/E(Z) complex" evidence=IDA] [GO:0007307 "eggshell
chorion gene amplification" evidence=IC] [GO:0031523 "Myb complex"
evidence=IDA] [GO:0005667 "transcription factor complex"
evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0016581 "NuRD complex" evidence=IDA] [GO:0042803 "protein
homodimerization activity" evidence=IPI] [GO:0000910 "cytokinesis"
evidence=IMP] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IMP] [GO:0031491
"nucleosome binding" evidence=IDA] [GO:0042054 "histone
methyltransferase activity" evidence=IDA] [GO:0035097 "histone
methyltransferase complex" evidence=IDA] [GO:0007517 "muscle organ
development" evidence=IMP] [GO:0048813 "dendrite morphogenesis"
evidence=IMP] [GO:0048666 "neuron development" evidence=IMP]
[GO:0048812 "neuron projection morphogenesis" evidence=IMP]
[GO:0070822 "Sin3-type complex" evidence=IDA] [GO:0007379 "segment
specification" evidence=IMP] [GO:0008284 "positive regulation of
cell proliferation" evidence=IMP] [GO:0061085 "regulation of
histone H3-K27 methylation" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:AE014297 GO:GO:0007346
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008284 GO:GO:0006281 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0006351
GO:GO:0005667 GO:GO:0000122 GO:GO:0000910 GO:GO:0048813
GO:GO:0007517 GO:GO:0035098 GO:GO:0007379 GO:GO:0006342
GO:GO:0051567 GO:GO:0042393 GO:GO:0005700 GO:GO:0042826
GO:GO:0035035 GO:GO:0042766 GO:GO:0016584 GO:GO:0006334
GO:GO:0016589 GO:GO:0033186 EMBL:U62388 EMBL:AM294392 EMBL:AM294393
EMBL:AM294394 EMBL:AM294395 EMBL:AM294396 EMBL:AM294397
EMBL:AM294398 EMBL:AM294399 EMBL:AM294400 EMBL:AM294401
EMBL:AM294402 EMBL:AM294403 EMBL:AY061408 RefSeq:NP_524354.1
UniGene:Dm.1657 PDB:2XYI PDB:2YB8 PDB:2YBA PDB:3C99 PDB:3C9C
PDBsum:2XYI PDBsum:2YB8 PDBsum:2YBA PDBsum:3C99 PDBsum:3C9C
ProteinModelPortal:Q24572 SMR:Q24572 DIP:DIP-23697N IntAct:Q24572
MINT:MINT-252601 STRING:Q24572 PaxDb:Q24572 PRIDE:Q24572
EnsemblMetazoa:FBtr0083052 GeneID:41836 KEGG:dme:Dmel_CG4236
CTD:41836 FlyBase:FBgn0263347 GeneTree:ENSGT00570000079069
InParanoid:Q24572 KO:K10752 OMA:CQPDLRL OrthoDB:EOG4ZCRKP
PhylomeDB:Q24572 EvolutionaryTrace:Q24572 GenomeRNAi:41836
NextBio:825799 Bgee:Q24572 GermOnline:CG4236 GO:GO:0031523
GO:GO:0016581 GO:GO:0070822 GO:GO:0007307 GO:GO:0070734
InterPro:IPR022052 Pfam:PF12265 Uniprot:Q24572
Length = 430
Score = 118 (46.6 bits), Expect = 0.00093, P = 0.00093
Identities = 35/134 (26%), Positives = 63/134 (47%)
Query: 46 LEGHQGCVNAISWNSKGS-LLISGSDDTHINVWSYSSRKL-LHSIETGHSANVFCTKFVP 103
++ H VN +S+N +L +GS D + +W + KL LHS E+ H +F ++ P
Sbjct: 273 VDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFES-HKDEIFQVQWSP 331
Query: 104 ETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAIT--PSALY--QCHTRRVKKLAVEVGN 159
L SG D + +++LS+ ++A P L+ HT ++ +
Sbjct: 332 HNETILASSGT-DRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNE 390
Query: 160 PHVVWSASEDGTLR 173
P ++ S SED ++
Sbjct: 391 PWIICSVSEDNIMQ 404
>UNIPROTKB|F1MNN4 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2000060 "positive regulation of protein ubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0070374 "positive regulation of ERK1 and ERK2
cascade" evidence=IEA] [GO:0050821 "protein stabilization"
evidence=IEA] [GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=IEA] [GO:0034644
"cellular response to UV" evidence=IEA] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849
OMA:EECLHTL EMBL:DAAA02044177 IPI:IPI00716528 UniGene:Bt.24006
ProteinModelPortal:F1MNN4 Ensembl:ENSBTAT00000010457 Uniprot:F1MNN4
Length = 627
Score = 105 (42.0 bits), Expect = 0.00097, Sum P(2) = 0.00097
Identities = 27/83 (32%), Positives = 49/83 (59%)
Query: 44 RELEGHQGCVNAISWNS--KGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKF 101
R L GH G V W+S + +++ISGS D + VW+ + + +H++ GH++ V C
Sbjct: 335 RTLVGHTGGV----WSSQMRDNIIISGSTDRTLKVWNAETGECIHTLY-GHTSTVRCMHL 389
Query: 102 VPETSDELVVSGAGDAEVRLFNL 124
++ VVSG+ DA +R++++
Sbjct: 390 ----HEKRVVSGSRDATLRVWDI 408
Score = 62 (26.9 bits), Expect = 0.00097, Sum P(2) = 0.00097
Identities = 11/32 (34%), Positives = 21/32 (65%)
Query: 640 DYIASGSDDGRWFIWEKQTGRLIKMLLGDEAG 671
+++ + SDDG +W+ +TG I+ L+ E+G
Sbjct: 555 NFVITSSDDGTVKLWDLKTGEFIRNLVTLESG 586
>TAIR|locus:2050064 [details] [associations]
symbol:AT2G21390 species:3702 "Arabidopsis thaliana"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0005215 "transporter activity" evidence=ISS] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0006888 "ER to
Golgi vesicle-mediated transport" evidence=ISS] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0030117 "membrane
coat" evidence=IEA] [GO:0030126 "COPI vesicle coat"
evidence=IEA;ISS] [GO:0016020 "membrane" evidence=IDA] [GO:0080008
"Cul4-RING ubiquitin ligase complex" evidence=ISS] [GO:0005829
"cytosol" evidence=IDA] [GO:0000226 "microtubule cytoskeleton
organization" evidence=RCA] [GO:0000911 "cytokinesis by cell plate
formation" evidence=RCA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0009853 "photorespiration"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0080129 "proteasome core complex assembly"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005829 GO:GO:0006886
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0016020 GO:GO:0016192
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC006841 GO:GO:0030126 HSSP:P63005
HOGENOM:HOG000195913 KO:K05236 ProtClustDB:CLSN2914500
InterPro:IPR016391 PIRSF:PIRSF003354 EMBL:AK228692 IPI:IPI00534598
PIR:F84600 RefSeq:NP_179734.1 UniGene:At.28070
ProteinModelPortal:Q9SJT9 SMR:Q9SJT9 STRING:Q9SJT9 PaxDb:Q9SJT9
PRIDE:Q9SJT9 EnsemblPlants:AT2G21390.1 GeneID:816678
KEGG:ath:AT2G21390 GeneFarm:3755 TAIR:At2g21390 InParanoid:Q9SJT9
OMA:GMENTDI PhylomeDB:Q9SJT9 Genevestigator:Q9SJT9 Uniprot:Q9SJT9
Length = 1218
Score = 126 (49.4 bits), Expect = 0.00097, Sum P(3) = 0.00097
Identities = 26/79 (32%), Positives = 47/79 (59%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPET 105
L GH + + ++ + ++S SDD I +W++ SR + S+ TGH+ V C F P+
Sbjct: 89 LLGHLDYIRTVQFHHENPWIVSASDDQTIRIWNWQSRTCI-SVLTGHNHYVMCASFHPK- 146
Query: 106 SDELVVSGAGDAEVRLFNL 124
++LVVS + D VR++++
Sbjct: 147 -EDLVVSASLDQTVRVWDI 164
Score = 46 (21.3 bits), Expect = 0.00097, Sum P(3) = 0.00097
Identities = 28/109 (25%), Positives = 46/109 (42%)
Query: 287 FSPNGEEVLLSYSGEHVYLMDVNHAGGRAMRYTVGDASKIMSFTPTLNGLELQPP--IHD 344
F+P L +SG H YL + + + G + S +P + G PP + D
Sbjct: 947 FAPLKSMFLDLFSGSHSYLRAFSSSPVVPLAIERGWSE---SSSPNVRG----PPALVFD 999
Query: 345 FLQTNIRVR-GEVATGLGKCRMLVEIARNSLEEGKHPYYGIEACNEVLE 392
F Q +++ G AT GK + + + L+ P +E+ EV E
Sbjct: 1000 FSQLEAKLKSGYKATTAGKLSEALRVFLSILQT--IPLVVVESRREVDE 1046
Score = 45 (20.9 bits), Expect = 0.00097, Sum P(3) = 0.00097
Identities = 14/50 (28%), Positives = 25/50 (50%)
Query: 141 ALYQCHTRRVK-KLAVEVGNPHVVWSASEDGTLRQHDFRQGSSCPPAGSS 189
AL+ R++ LA+E GN V +++ + + H +R G G+S
Sbjct: 640 ALHFVEDERIRFNLALESGNISVAVASATEINEKDHWYRLGVEALRQGNS 689
>MGI|MGI:1354695 [details] [associations]
symbol:Fbxw7 "F-box and WD-40 domain protein 7"
species:10090 "Mus musculus" [GO:0001570 "vasculogenesis"
evidence=IMP] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA;TAS]
[GO:0005654 "nucleoplasm" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=TAS] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO] [GO:0007062 "sister chromatid cohesion"
evidence=ISO] [GO:0007219 "Notch signaling pathway" evidence=IDA]
[GO:0016567 "protein ubiquitination" evidence=ISO;ISA] [GO:0019005
"SCF ubiquitin ligase complex" evidence=ISO] [GO:0030324 "lung
development" evidence=IMP] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0032876 "negative regulation of DNA endoreduplication"
evidence=ISO] [GO:0034644 "cellular response to UV" evidence=ISO]
[GO:0043234 "protein complex" evidence=ISO] [GO:0045741 "positive
regulation of epidermal growth factor-activated receptor activity"
evidence=ISO] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0050821 "protein stabilization" evidence=ISO]
[GO:0070374 "positive regulation of ERK1 and ERK2 cascade"
evidence=ISO] [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=ISO] Reactome:REACT_93132 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294
SMART:SM00256 SMART:SM00320 MGI:MGI:1354695 GO:GO:0005783
GO:GO:0005634 GO:GO:0005794 GO:GO:0048471 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030324
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0016567 GO:GO:0001570
GO:GO:0019005 GO:GO:0031146 GeneTree:ENSGT00690000101849 KO:K10260
CTD:55294 HOVERGEN:HBG051596 OMA:EECLHTL EMBL:AF391202
EMBL:AF391193 EMBL:AF391194 EMBL:AF391195 EMBL:AF391196
EMBL:AF391197 EMBL:AF391198 EMBL:AF391199 EMBL:AF391200
EMBL:AF391201 EMBL:AF391192 EMBL:AF427101 EMBL:BC131648
EMBL:AK032174 IPI:IPI00162935 RefSeq:NP_536353.2 UniGene:Mm.196475
ProteinModelPortal:Q8VBV4 SMR:Q8VBV4 STRING:Q8VBV4 PRIDE:Q8VBV4
Ensembl:ENSMUST00000029727 GeneID:50754 KEGG:mmu:50754
UCSC:uc008pql.2 HOGENOM:HOG000236264 NextBio:307631 Bgee:Q8VBV4
Genevestigator:Q8VBV4 GermOnline:ENSMUSG00000028086 Uniprot:Q8VBV4
Length = 629
Score = 105 (42.0 bits), Expect = 0.00098, Sum P(2) = 0.00097
Identities = 27/83 (32%), Positives = 49/83 (59%)
Query: 44 RELEGHQGCVNAISWNS--KGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKF 101
R L GH G V W+S + +++ISGS D + VW+ + + +H++ GH++ V C
Sbjct: 337 RTLVGHTGGV----WSSQMRDNIIISGSTDRTLKVWNAETGECIHTLY-GHTSTVRCMHL 391
Query: 102 VPETSDELVVSGAGDAEVRLFNL 124
++ VVSG+ DA +R++++
Sbjct: 392 ----HEKRVVSGSRDATLRVWDI 410
Score = 62 (26.9 bits), Expect = 0.00098, Sum P(2) = 0.00097
Identities = 11/32 (34%), Positives = 21/32 (65%)
Query: 640 DYIASGSDDGRWFIWEKQTGRLIKMLLGDEAG 671
+++ + SDDG +W+ +TG I+ L+ E+G
Sbjct: 557 NFVITSSDDGTVKLWDLKTGEFIRNLVTLESG 588
>UNIPROTKB|I3LI24 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9823 "Sus scrofa" [GO:2001244 "positive
regulation of intrinsic apoptotic signaling pathway" evidence=IEA]
[GO:0051898 "negative regulation of protein kinase B signaling
cascade" evidence=IEA] [GO:0051726 "regulation of cell cycle"
evidence=IEA] [GO:0050765 "negative regulation of phagocytosis"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0043547 "positive regulation of GTPase activity"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0042169 "SH2 domain binding" evidence=IEA]
[GO:0032464 "positive regulation of protein homooligomerization"
evidence=IEA] [GO:0032436 "positive regulation of proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0030971 "receptor tyrosine kinase binding" evidence=IEA]
[GO:0030496 "midbody" evidence=IEA] [GO:0030425 "dendrite"
evidence=IEA] [GO:0030335 "positive regulation of cell migration"
evidence=IEA] [GO:0030308 "negative regulation of cell growth"
evidence=IEA] [GO:0030292 "protein tyrosine kinase inhibitor
activity" evidence=IEA] [GO:0019903 "protein phosphatase binding"
evidence=IEA] [GO:0008656 "cysteine-type endopeptidase activator
activity involved in apoptotic process" evidence=IEA] [GO:0008200
"ion channel inhibitor activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=IEA] [GO:0001891 "phagocytic cup"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0048471 GO:GO:0030308
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0043547 GO:GO:0043025 GO:GO:0030425
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043065 GO:GO:0051726
GO:GO:0001891 GO:GO:0030335 GO:GO:0050765 GO:GO:0001934
GO:GO:0030496 GO:GO:0032436 GO:GO:0008200 GO:GO:2001244
GO:GO:0032464 GO:GO:0030292 OMA:IRVWQVM
GeneTree:ENSGT00700000104461 Ensembl:ENSSSCT00000022602
Uniprot:I3LI24
Length = 317
Score = 100 (40.3 bits), Expect = 0.00098, Sum P(2) = 0.00098
Identities = 24/82 (29%), Positives = 42/82 (51%)
Query: 44 RELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVP 103
R GH V +++++S ++SGS D I +W+ + HS V C +F P
Sbjct: 99 RRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSP 158
Query: 104 ETSDELVVSGAGDAEVRLFNLS 125
+S+ ++VS D V ++NL+
Sbjct: 159 NSSNPIIVSCGWDKLVNVWNLA 180
Score = 59 (25.8 bits), Expect = 0.00098, Sum P(2) = 0.00098
Identities = 16/63 (25%), Positives = 30/63 (47%)
Query: 615 MKQRYVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAGNVI 674
+K ++GH T + G ASG DG+ +W+ G+ + L G G++I
Sbjct: 184 LKTNHIGH----TGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG---GDII 236
Query: 675 SSM 677
+++
Sbjct: 237 NAL 239
>UNIPROTKB|F1SIZ2 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005932 "microtubule basal body" evidence=IEA]
[GO:0005814 "centriole" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:CU914695
ProteinModelPortal:F1SIZ2 Ensembl:ENSSSCT00000012506 Uniprot:F1SIZ2
Length = 367
Score = 113 (44.8 bits), Expect = 0.00099, Sum P(2) = 0.00099
Identities = 37/133 (27%), Positives = 60/133 (45%)
Query: 41 SQERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTK 100
S ER +GH+ V + ++ L SGS D+ + VW + + TGH V C
Sbjct: 41 SLERHFKGHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRF-TGHKDAVTCVN 99
Query: 101 FVPETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVEVGNP 160
F P S L+ SG+ D VR++ + G S +++ HT V+ +
Sbjct: 100 FSP--SGHLLASGSRDKTVRIW-VPNIKGE---------STVFRAHTATVRSVHFCSDGQ 147
Query: 161 HVVWSASEDGTLR 173
V +AS+D T++
Sbjct: 148 SFV-TASDDKTIK 159
Score = 47 (21.6 bits), Expect = 0.00099, Sum P(2) = 0.00099
Identities = 11/35 (31%), Positives = 18/35 (51%)
Query: 621 GHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWE 655
GH T + +F + G+Y ASG D + +W+
Sbjct: 300 GHQGPATTV---AF-SRTGEYFASGGSDEQVMVWK 330
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.135 0.408 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 693 655 0.00096 120 3 11 22 0.39 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 237
No. of states in DFA: 622 (66 KB)
Total size of DFA: 376 KB (2185 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 53.41u 0.16s 53.57t Elapsed: 00:00:03
Total cpu time: 53.45u 0.16s 53.61t Elapsed: 00:00:03
Start: Tue May 21 03:43:55 2013 End: Tue May 21 03:43:58 2013
WARNINGS ISSUED: 1