BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 005504
(693 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8YZH7|DER_NOSS1 GTPase Der OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=der PE=3
SV=1
Length = 453
Score = 456 bits (1172), Expect = e-127, Method: Compositional matrix adjust.
Identities = 255/516 (49%), Positives = 330/516 (63%), Gaps = 70/516 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAI+GRPNVGKS L NRL G AIV DEPGVTRDR Y ++W + EF +VDTGG+
Sbjct: 3 LPIVAIIGRPNVGKSTLVNRLAGEQTAIVHDEPGVTRDRTYLPAYWSDREFQVVDTGGL- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ D E +PL I +QA AA+ E+ IF+V+G
Sbjct: 62 --------VFND-------DTEFLPL-------------IRQQALAALHEASAAIFVVNG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
Q G +ADEEIA+WLR+ + F LAVNKCESP +G +Q SEFW LG P PISAI G
Sbjct: 94 QTGPNSADEEIAEWLRQQPVPVF--LAVNKCESPDQGSIQASEFWELGLGEPYPISAIHG 151
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
GTGELLD + L V TE +EE N I IAI+GRPNVGKSS+LNA GE+R IVSP
Sbjct: 152 NGTGELLDELIKHLPPV--TE--LEENNEI-KIAIIGRPNVGKSSLLNAFAGEERVIVSP 206
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
ISGTTRDAIDT F +GQ +RLIDTAGIRK+ +I TE S+NRAF+AIRR+DVV
Sbjct: 207 ISGTTRDAIDT-FIERDGQNYRLIDTAGIRKKKSIDYG---TEFFSINRAFKAIRRADVV 262
Query: 462 ALVIEAMACITEQDCRIAERIEQEGKGCLIVVNKWDTIPNKNQQTATYYEQDVREKLRAL 521
LVI+A+ +TEQD ++A RI EGK C++VVNKWD + K+ T YE+++ +L
Sbjct: 263 LLVIDALDGVTEQDQKLAGRILDEGKACVVVVNKWDAV-EKDSYTIYDYEKNLEARLHFT 321
Query: 522 DWAPIVYSTAIAGQSVDKIIVAAEMVDKERSRRLSTATINQVVQEAVAFKSPPRTRGGRR 581
+WA +Y +A+ GQ V+KI+ ++E RR+ST+ IN+V+++AV + SPP +RGGR+
Sbjct: 322 EWADTIYVSAVTGQRVEKILELVTKANEEHKRRVSTSVINEVLEDAVRWHSPPTSRGGRQ 381
Query: 582 GRVYYCTQLLLGIFVRSAFRYGALGPLHIKYDLLQAAVRPPTFVFFVNDAKLFPETYRRY 641
GR+YY TQ+ + +PPT FVN+AK F + YRRY
Sbjct: 382 GRIYYGTQV---------------------------STQPPTIALFVNEAKRFNDNYRRY 414
Query: 642 MEKQLRADAGFSGTPIRLLWRSRRKMEMKEGKSASR 677
+E+Q R GF GTPIRLLWRS++ +++ G SA+R
Sbjct: 415 IERQFRQQLGFKGTPIRLLWRSKKVRDVESG-SANR 449
>sp|Q3M929|DER_ANAVT GTPase Der OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937)
GN=der PE=3 SV=1
Length = 453
Score = 454 bits (1169), Expect = e-127, Method: Compositional matrix adjust.
Identities = 253/516 (49%), Positives = 330/516 (63%), Gaps = 70/516 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAI+GRPNVGKS L NRL G AIV DEPGVTRDR Y ++W + EF +VDTGG+
Sbjct: 3 LPIVAIIGRPNVGKSTLVNRLAGEQTAIVHDEPGVTRDRTYLPAYWSDREFQVVDTGGL- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ D E +PL I +QA AA+ E+ IF+V+G
Sbjct: 62 --------VFND-------DTEFLPL-------------IRQQALAALHEASAAIFVVNG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
Q G +ADEEIA+WLR+ + F LAVNKCESP +G +Q SEFW LG P PISAI G
Sbjct: 94 QTGPNSADEEIAEWLRQQPVPVF--LAVNKCESPDQGSIQASEFWELGLGEPYPISAIHG 151
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
GTGELLD + +K + T +L EEN IAI+GRPNVGKSS+LNA GE+R IVSP
Sbjct: 152 NGTGELLDEL---IKHLPPTTEL--EENNEIKIAIIGRPNVGKSSLLNAFAGEERVIVSP 206
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
ISGTTRDAIDT F GQ +RLIDTAGIRK+ +I TE S+NRAF+AIRR+DVV
Sbjct: 207 ISGTTRDAIDT-FIERNGQNYRLIDTAGIRKKKSIDYG---TEFFSINRAFKAIRRADVV 262
Query: 462 ALVIEAMACITEQDCRIAERIEQEGKGCLIVVNKWDTIPNKNQQTATYYEQDVREKLRAL 521
LVI+A+ +TEQD ++A RI EGK C++VVNKWD + K+ T YE+++ +L
Sbjct: 263 LLVIDALDGVTEQDQKLAGRILDEGKACVVVVNKWDAV-EKDSYTIYDYEKNLEARLHFT 321
Query: 522 DWAPIVYSTAIAGQSVDKIIVAAEMVDKERSRRLSTATINQVVQEAVAFKSPPRTRGGRR 581
+WA +Y +A+ GQ V+KI+ ++E RR+ST+ IN+V+++AV++ SPP +RGGR+
Sbjct: 322 EWADTIYVSAVTGQRVEKILELVTKANEEHKRRVSTSVINEVLEDAVSWHSPPTSRGGRQ 381
Query: 582 GRVYYCTQLLLGIFVRSAFRYGALGPLHIKYDLLQAAVRPPTFVFFVNDAKLFPETYRRY 641
GR+YY TQ+ + +PPT FVN+AK F + YRRY
Sbjct: 382 GRIYYGTQV---------------------------STQPPTIALFVNEAKRFNDNYRRY 414
Query: 642 MEKQLRADAGFSGTPIRLLWRSRRKMEMKEGKSASR 677
+E+Q R GF GTPIRLLWRS++ +++ G SA+R
Sbjct: 415 IERQFRQQLGFKGTPIRLLWRSKKVRDVESG-SANR 449
>sp|B2J1L2|DER_NOSP7 GTPase Der OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102)
GN=der PE=3 SV=1
Length = 456
Score = 449 bits (1155), Expect = e-125, Method: Compositional matrix adjust.
Identities = 246/521 (47%), Positives = 330/521 (63%), Gaps = 69/521 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAI+GRPNVGKS L NRL G AIV DEPGVTRDR Y +FW EF++VDTGG+
Sbjct: 3 LPIVAIIGRPNVGKSTLVNRLAGEQTAIVHDEPGVTRDRTYMPAFWNGREFLVVDTGGL- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ D E +PL I +QA A+ E+C IF+VDG
Sbjct: 62 --------VFND-------DTEFLPL-------------IRQQAMTALAEACAAIFVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
Q G T+AD+EIA+W+R+ + ++LAVNKCESP +G+MQ +EFW LG P PISAI G
Sbjct: 94 QTGPTSADQEIAEWMRQQRVP--VLLAVNKCESPDQGLMQAAEFWELGLGEPYPISAIHG 151
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
+GTGELLD + + + VE + E N I +AIVGRPNVGKSS+LNA VGE+R IVSP
Sbjct: 152 SGTGELLDELVNHIPAVED----IPETNEI-KVAIVGRPNVGKSSLLNAFVGEERAIVSP 206
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
ISGTTRDAIDT +GQ +RLIDTAGIRK+ I TE S+NRAF+AIRR+DVV
Sbjct: 207 ISGTTRDAIDTVIE-RDGQTYRLIDTAGIRKKKHIEYG---TEFFSINRAFKAIRRADVV 262
Query: 462 ALVIEAMACITEQDCRIAERIEQEGKGCLIVVNKWDTIPNKNQQTATYYEQDVREKLRAL 521
LV++A+ +TEQD ++A RI +EG+ C+IVVNKWD + K+ T YE+ ++ +L
Sbjct: 263 LLVLDAVDGVTEQDQKLAGRIIEEGRACIIVVNKWDAV-EKDSYTIYDYEKTLQSRLHFT 321
Query: 522 DWAPIVYSTAIAGQSVDKIIVAAEMVDKERSRRLSTATINQVVQEAVAFKSPPRTRGGRR 581
+WA ++ +A++GQ V+KI+ + + RR+ST+ IN+V+ +AV++ SPP +RGGR+
Sbjct: 322 EWAETIFVSALSGQRVEKILELVKTAAESHKRRVSTSVINEVLTDAVSWHSPPASRGGRQ 381
Query: 582 GRVYYCTQLLLGIFVRSAFRYGALGPLHIKYDLLQAAVRPPTFVFFVNDAKLFPETYRRY 641
G++YY TQ+ + +PPT FVND+K F + YRRY
Sbjct: 382 GKIYYGTQV---------------------------SSQPPTIALFVNDSKRFNDNYRRY 414
Query: 642 MEKQLRADAGFSGTPIRLLWRSRRKMEMKEGKSASRTQANL 682
+E+Q R GF GTPI LLWRS++ + + G T+ L
Sbjct: 415 IERQFRQQLGFKGTPIILLWRSKKVRDAEIGNVNRATRVKL 455
Score = 55.8 bits (133), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 92/206 (44%), Gaps = 38/206 (18%)
Query: 155 IGNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFM 214
+ ++PE +VAIVGRPNVGKS+L N VG RAIV G TRD + +
Sbjct: 168 VEDIPETNEIKVAIVGRPNVGKSSLLNAFVGEERAIVSPISGTTRDAIDTVIERDGQTYR 227
Query: 215 LVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESC 274
L+DT G+ + I T ++ R A AI +
Sbjct: 228 LIDTAGIRK-------------------KKHIEYGTEFFSINR--------AFKAIRRAD 260
Query: 275 VIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS-----L 329
V++ ++D G+T D+++A R + I+ VNK ++ K + ++ L
Sbjct: 261 VVLLVLDAVDGVTEQDQKLAG--RIIEEGRACIIVVNKWDAVEKDSYTIYDYEKTLQSRL 318
Query: 330 GFS----PLPISAISGTGTGELLDLV 351
F+ + +SA+SG ++L+LV
Sbjct: 319 HFTEWAETIFVSALSGQRVEKILELV 344
>sp|A5GR60|DER_SYNR3 GTPase Der OS=Synechococcus sp. (strain RCC307) GN=der PE=3 SV=1
Length = 452
Score = 437 bits (1125), Expect = e-121, Method: Compositional matrix adjust.
Identities = 244/521 (46%), Positives = 323/521 (61%), Gaps = 77/521 (14%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAI+GRPNVGKS L NRL AIV DEPGVTRDR Y FWG F +VDTGG++
Sbjct: 3 LPVVAIIGRPNVGKSTLVNRLCRSRDAIVHDEPGVTRDRTYQEGFWGGRTFRVVDTGGLV 62
Query: 223 --NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLV 280
+ S+ P I E QA+ A+ E+CV + +V
Sbjct: 63 FDDDSEFLPEIRE-------------------------------QASLAMAEACVALVIV 91
Query: 281 DGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAI 339
DGQ GLTAADE IA WLR+ ++L VNKCESP +G+ +EFW+LG P PISAI
Sbjct: 92 DGQQGLTAADEAIAAWLRQQKCP--VLLGVNKCESPEQGLAMAAEFWALGLGEPKPISAI 149
Query: 340 SGTGTGELLDLVCSELKKVEGTEDLVEEENRIP-AIAIVGRPNVGKSSILNALVGEDRTI 398
G GTG+LLD V L + EEE P +AIVGRPNVGKSS+LN + GE+R I
Sbjct: 150 HGAGTGDLLDQVLDFLPPQD------EEEAPEPIQMAIVGRPNVGKSSLLNTVCGENRAI 203
Query: 399 VSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRS 458
VSPI GTTRD IDT EGQ ++L+DTAGIR+R ++ E +NR+F+AI RS
Sbjct: 204 VSPIRGTTRDTIDTSIE-REGQSWKLLDTAGIRRRRSVNYG---PEFFGINRSFKAIERS 259
Query: 459 DVVALVIEAMACITEQDCRIAERIEQEGKGCLIVVNKWDTIPNKNQQTATYYEQDVREKL 518
DV LVI+A +TEQD R+A RIE+EG+ CL+VVNKWD + K+ T E+++R KL
Sbjct: 260 DVCVLVIDAEEGVTEQDQRLAGRIEEEGRACLVVVNKWDLV-EKDSHTMPAMEKELRSKL 318
Query: 519 RALDWAPIVYSTAIAGQSVDKIIVAAEMVDKERSRRLSTATINQVVQEAVAFKSPPRTRG 578
L+WAP+++ +A+ GQ V++I A + ++ RR++TA +N+V+QEA++++SPP TRG
Sbjct: 319 YFLEWAPMLFISALTGQRVERIFPLAVLAVEQHRRRVTTAVVNEVLQEALSWRSPPTTRG 378
Query: 579 GRRGRVYYCTQLLLGIFVRSAFRYGALGPLHIKYDLLQAAVRPPTFVFFVNDAKLFPETY 638
GR+GR+YY TQ+ AVRPP+F FVN+ KLF +TY
Sbjct: 379 GRQGRLYYGTQV---------------------------AVRPPSFTLFVNEPKLFGDTY 411
Query: 639 RRYMEKQLRADAGFSGTPIRLLWRSR--RKMEMKEGKSASR 677
RRY+E+Q+R GF G+P+RL WR + R E + ++ASR
Sbjct: 412 RRYVERQIRQGLGFEGSPVRLFWRGKQQRDAERDQARAASR 452
>sp|Q8DKI1|DER_THEEB GTPase Der OS=Thermosynechococcus elongatus (strain BP-1) GN=der
PE=3 SV=1
Length = 449
Score = 436 bits (1121), Expect = e-121, Method: Compositional matrix adjust.
Identities = 239/510 (46%), Positives = 315/510 (61%), Gaps = 68/510 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VA+VGRPNVGKS NRL G AIV DEPGVTRDR Y +FW + EF++VDTGG++
Sbjct: 3 LPIVAVVGRPNVGKSTFVNRLAGERDAIVHDEPGVTRDRTYRPAFWQDREFLVVDTGGLV 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
S + +PL I +QA A++E+ IF+VDG
Sbjct: 63 FDDDS----------------DFLPL-------------IRQQAELALQEATAAIFVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
QAG TA D EIA WLR+ + +++AVNKCES + G +Q +EFWSLG P PIS+I G
Sbjct: 94 QAGPTALDYEIAAWLRQ--LSLPVLVAVNKCESRQMGQVQAAEFWSLGLGEPYPISSIHG 151
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
+GTGELLD + + L E + E + +AI GRPNVGKSS+LNAL+G DR IVSP
Sbjct: 152 SGTGELLDQLITYLPAGETLPEAPEIQ-----VAIAGRPNVGKSSLLNALIGSDRAIVSP 206
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
ISGTTRDAIDT G ++R IDTAGIRKR +A E SV+RAF+AI RSDVV
Sbjct: 207 ISGTTRDAIDTVIEH-GGTQYRFIDTAGIRKRTHVAYG---PEMFSVHRAFKAIHRSDVV 262
Query: 462 ALVIEAMACITEQDCRIAERIEQEGKGCLIVVNKWDTIPNKNQQTATYYEQDVREKLRAL 521
LV++A+ ITEQD R+A I +G+ C+++VNKWD + +K+ T Y + ++L L
Sbjct: 263 LLVLDALEEITEQDQRLAGHIADQGRACVLIVNKWDAVLDKDTYTINAYRDRLYQRLHFL 322
Query: 522 DWAPIVYSTAIAGQSVDKIIVAAEMVDKERSRRLSTATINQVVQEAVAFKSPPRTRGGRR 581
+WA ++ +A GQ ++KI A + ++ RR++TA +N V+QEA+ + +PP TR GR+
Sbjct: 323 EWADALFVSAHTGQRLEKIFAAVDAAVEQHRRRVTTAVVNDVIQEALHWHTPPATRQGRQ 382
Query: 582 GRVYYCTQLLLGIFVRSAFRYGALGPLHIKYDLLQAAVRPPTFVFFVNDAKLFPETYRRY 641
G++YY TQ+ A +PPTF FVNDAKLF E YRRY
Sbjct: 383 GKIYYATQV---------------------------ATQPPTFAIFVNDAKLFKENYRRY 415
Query: 642 MEKQLRADAGFSGTPIRLLWRSRRKMEMKE 671
+E Q+R GF GTPIRLLWRS++ E E
Sbjct: 416 IESQIRQQLGFRGTPIRLLWRSKKPREAAE 445
Score = 56.2 bits (134), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 70/160 (43%), Gaps = 31/160 (19%)
Query: 157 NVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLV 216
+PE +VAI GRPNVGKS+L N L+G +RAIV G TRD + G ++ +
Sbjct: 170 TLPEAPEIQVAIAGRPNVGKSSLLNALIGSDRAIVSPISGTTRDAIDTVIEHGGTQYRFI 229
Query: 217 DTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIE-RQATAAIEESCV 275
DT G+ + VA P M +A AI S V
Sbjct: 230 DTAGI----------------------------RKRTHVAYGPEMFSVHRAFKAIHRSDV 261
Query: 276 IIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCES 315
++ ++D +T D+ +A + + +L VNK ++
Sbjct: 262 VLLVLDALEEITEQDQRLAGHIADQ--GRACVLIVNKWDA 299
>sp|Q3AI13|DER_SYNSC GTPase Der OS=Synechococcus sp. (strain CC9605) GN=der PE=3 SV=1
Length = 455
Score = 433 bits (1113), Expect = e-120, Method: Compositional matrix adjust.
Identities = 238/508 (46%), Positives = 319/508 (62%), Gaps = 76/508 (14%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAI+GRPNVGKS L NRL AIV D+PGVTRDR Y +WG+ EF +VDTGG++
Sbjct: 4 PVVAIIGRPNVGKSTLVNRLCRSREAIVHDQPGVTRDRTYQDGYWGDREFKVVDTGGLVF 63
Query: 224 VSKSQ--PNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
S+ P I E QA A+EE+ V + +VD
Sbjct: 64 DDDSEFLPEIRE-------------------------------QAALALEEASVALVIVD 92
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
GQ GLTAADE IA++LR + +LAVNKCESP +G+ EFWSLG P PISAI
Sbjct: 93 GQQGLTAADESIAEFLRSHRCP--TLLAVNKCESPEQGLAMAGEFWSLGLGEPHPISAIH 150
Query: 341 GTGTGELLDLVCSEL--KKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTI 398
G GTGELLD V + L K EG +EE I +AI+GRPNVGKSS+LNA+ GE R I
Sbjct: 151 GAGTGELLDQVLTFLPPKDQEG-----DEEEPI-QMAIIGRPNVGKSSLLNAICGEQRAI 204
Query: 399 VSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRS 458
VSPI GTTRD IDT E + +RL+DTAGIR+R ++ E +NR+F+AI RS
Sbjct: 205 VSPIRGTTRDTIDTSII-RENRPWRLVDTAGIRRRRSVNYG---PEFFGINRSFKAIERS 260
Query: 459 DVVALVIEAMACITEQDCRIAERIEQEGKGCLIVVNKWDTIPNKNQQTATYYEQDVREKL 518
DV LVI+A+ +TEQD R+A RIE++G+ C++VVNKWD + K+ T T E+++R KL
Sbjct: 261 DVCVLVIDALDGVTEQDQRLAGRIEEDGRACVVVVNKWDAL-EKDSHTMTAMEKELRSKL 319
Query: 519 RALDWAPIVYSTAIAGQSVDKIIVAAEMVDKERSRRLSTATINQVVQEAVAFKSPPRTRG 578
LDWAP+++++A+ GQ V+ I A + ++ RR+ST+ +N+V++EA++++SPP TRG
Sbjct: 320 YFLDWAPMLFTSALTGQRVESIFALAALAVEQHRRRVSTSVVNEVLKEALSWRSPPTTRG 379
Query: 579 GRRGRVYYCTQLLLGIFVRSAFRYGALGPLHIKYDLLQAAVRPPTFVFFVNDAKLFPETY 638
GR+G++YY TQ+ A RPP+F FVND K+F ETY
Sbjct: 380 GRQGKLYYGTQV---------------------------ASRPPSFTLFVNDPKMFGETY 412
Query: 639 RRYMEKQLRADAGFSGTPIRLLWRSRRK 666
RRY+E+Q+R GF G+P+RL WR +++
Sbjct: 413 RRYVERQIREGLGFDGSPLRLFWRGKQQ 440
>sp|Q7U8G2|DER_SYNPX GTPase Der OS=Synechococcus sp. (strain WH8102) GN=der PE=3 SV=1
Length = 455
Score = 433 bits (1113), Expect = e-120, Method: Compositional matrix adjust.
Identities = 239/508 (47%), Positives = 319/508 (62%), Gaps = 76/508 (14%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAI+GRPNVGKS L NRL AIV DEPGVTRDR Y +WG+ EF +VDTGG++
Sbjct: 4 PVVAIIGRPNVGKSTLVNRLCRSREAIVHDEPGVTRDRTYQDGYWGDREFKVVDTGGLVF 63
Query: 224 VSKSQ--PNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
S+ P I E QA A+EE+ V + +VD
Sbjct: 64 DDDSEFLPEIRE-------------------------------QAALAMEEASVAVVIVD 92
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
GQ G+TAADE IA++LR +LAVNKCESP +G+ +EFWSLG P PISAI
Sbjct: 93 GQQGITAADESIAEFLRSRPCP--TLLAVNKCESPEQGLAMAAEFWSLGLGEPHPISAIH 150
Query: 341 GTGTGELLDLVCSEL--KKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTI 398
G GTG+LLD V + L K EG +EE I +AI+GRPNVGKSS+LNA+ GE R I
Sbjct: 151 GVGTGDLLDQVLTFLPPKDQEG-----DEEEPI-QMAIIGRPNVGKSSLLNAICGEQRAI 204
Query: 399 VSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRS 458
VSPI GTTRD IDT E + +RL+DTAGIR+R ++ E +NR+F+AI RS
Sbjct: 205 VSPIRGTTRDTIDTNIV-RENRPWRLVDTAGIRRRRSVNYG---PEYFGINRSFKAIDRS 260
Query: 459 DVVALVIEAMACITEQDCRIAERIEQEGKGCLIVVNKWDTIPNKNQQTATYYEQDVREKL 518
DV LVI+A+ +TEQD R+A RIE++G+ C++VVNKWD + K+ T T E+++R KL
Sbjct: 261 DVCVLVIDALDGVTEQDQRLAGRIEEDGRACVVVVNKWDAV-EKDSHTMTAMEKELRAKL 319
Query: 519 RALDWAPIVYSTAIAGQSVDKIIVAAEMVDKERSRRLSTATINQVVQEAVAFKSPPRTRG 578
LDWAP+++++A+ GQ VD I A + ++ RR+ST+ +N+V++EA++++SPP TRG
Sbjct: 320 YFLDWAPMLFTSALTGQRVDSIFALAALAVEQHRRRVSTSVVNEVLKEALSWRSPPTTRG 379
Query: 579 GRRGRVYYCTQLLLGIFVRSAFRYGALGPLHIKYDLLQAAVRPPTFVFFVNDAKLFPETY 638
GR+GR+YY TQ+ A RPP+F FVND KLF +TY
Sbjct: 380 GRQGRLYYGTQV---------------------------ASRPPSFTLFVNDPKLFGDTY 412
Query: 639 RRYMEKQLRADAGFSGTPIRLLWRSRRK 666
RRY+E+Q+R GF GTP++L WR +++
Sbjct: 413 RRYVERQIREGLGFDGTPVKLYWRGKQQ 440
>sp|Q119L7|DER_TRIEI GTPase Der OS=Trichodesmium erythraeum (strain IMS101) GN=der PE=3
SV=1
Length = 453
Score = 433 bits (1113), Expect = e-120, Method: Compositional matrix adjust.
Identities = 236/510 (46%), Positives = 316/510 (61%), Gaps = 69/510 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAI+GRPNVGKS + NRL AIV DEPG+TRDR Y ++W + EF +VDTGG+
Sbjct: 3 LPIVAIIGRPNVGKSTIVNRLAESKDAIVHDEPGITRDRTYRNAYWEDREFQVVDTGGL- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ +D E +PL I QA AA+ E+ V IF+VDG
Sbjct: 62 --------VFDD-------NTEFLPL-------------IREQAMAALVEASVAIFVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
Q GLT DEEIA WLR+ + I+LAVNKCES +G+ Q + FW LG P PIS I G
Sbjct: 94 QTGLTGGDEEIAQWLRQQTIP--ILLAVNKCESITEGLTQAAMFWELGLGEPYPISGIHG 151
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
GTGELLD + + L T+ + E N+ IAIVGRPNVGKSS+LN+ +GE R IVSP
Sbjct: 152 NGTGELLDDLITYLP----TQGEITETNQ-TKIAIVGRPNVGKSSLLNSFIGEKRAIVSP 206
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
ISGTTRDAIDT G+ +RLIDTAGIRK+ + E +NRAF+AIRR++VV
Sbjct: 207 ISGTTRDAIDT-VVERNGKTYRLIDTAGIRKKKNVEYGA---EFFGINRAFKAIRRAEVV 262
Query: 462 ALVIEAMACITEQDCRIAERIEQEGKGCLIVVNKWDTIPNKNQQTATYYEQDVREKLRAL 521
VI+A+ +TEQD ++A RI ++G+ C+IVVNKWD I K+ T YEQ+VR +L +
Sbjct: 263 MFVIDALDGVTEQDQKLANRIIEDGRACVIVVNKWDAI-EKDNYTIYTYEQEVRSRLYFV 321
Query: 522 DWAPIVYSTAIAGQSVDKIIVAAEMVDKERSRRLSTATINQVVQEAVAFKSPPRTRGGRR 581
+WA +++ +A+ G+ V+KII + E RR++T+ IN+V++EA+++ SPP R GR+
Sbjct: 322 EWAEMIFVSALTGKRVEKIINLIDNAANEYQRRVTTSVINEVLEEAISWNSPPTNRQGRQ 381
Query: 582 GRVYYCTQLLLGIFVRSAFRYGALGPLHIKYDLLQAAVRPPTFVFFVNDAKLFPETYRRY 641
G++YY TQ+ +PPT FVND K FPE YRRY
Sbjct: 382 GKIYYGTQV---------------------------TSKPPTIALFVNDPKRFPENYRRY 414
Query: 642 MEKQLRADAGFSGTPIRLLWRSRRKMEMKE 671
++ Q R GF+GTPIRLLWR ++ E+++
Sbjct: 415 IQSQFRQHLGFTGTPIRLLWRGKKAREVEQ 444
Score = 56.2 bits (134), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 78/165 (47%), Gaps = 29/165 (17%)
Query: 154 TIGNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEF 213
T G + E ++AIVGRPNVGKS+L N +G RAIV G TRD + +
Sbjct: 167 TQGEITETNQTKIAIVGRPNVGKSSLLNSFIGEKRAIVSPISGTTRDAIDTVVERNGKTY 226
Query: 214 MLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEES 273
L+DT G+ + + N+ G E + +A AI +
Sbjct: 227 RLIDTAGI----RKKKNV--------EYGAEFFGI---------------NRAFKAIRRA 259
Query: 274 CVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRK 318
V++F++D G+T D+++A+ + ++ + ++ VNK ++ K
Sbjct: 260 EVVMFVIDALDGVTEQDQKLANRIIED--GRACVIVVNKWDAIEK 302
>sp|Q5N167|DER_SYNP6 GTPase Der OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 /
SAUG 1402/1) GN=der PE=3 SV=1
Length = 453
Score = 431 bits (1107), Expect = e-119, Method: Compositional matrix adjust.
Identities = 240/513 (46%), Positives = 329/513 (64%), Gaps = 68/513 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAI+GRPNVGKS L NRL G AIV DEPGVTRDR Y +FW + +F +VDTGG+
Sbjct: 3 LPIVAILGRPNVGKSTLVNRLAGSREAIVHDEPGVTRDRTYQEAFWCDRDFTVVDTGGL- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ +D E +PL I QA A+ E+ + + +VDG
Sbjct: 62 --------VFDD-------DTEFLPL-------------IREQAELALAEAALAVLVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
QAGLTAAD EIADWLR + ++ I++AVNKCESP KG Q +EFWSLGF PLPIS+I G
Sbjct: 94 QAGLTAADNEIADWLR--HQNRPIVVAVNKCESPDKGAAQAAEFWSLGFGEPLPISSIHG 151
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
+GTGELLD V L+ + ++ +E I +AIVGRPNVGKSS+LN+ +GE R IVSP
Sbjct: 152 SGTGELLDRV---LELLPPADEAAGDETEI-GVAIVGRPNVGKSSLLNSFLGEQRAIVSP 207
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
I+GTTRDAIDT + Q++RL+DTAGIR++ + E +NR+F+AIRR+DV
Sbjct: 208 IAGTTRDAIDTVIERND-QRYRLVDTAGIRRKRGVDYG---PEFFGINRSFKAIRRADVC 263
Query: 462 ALVIEAMACITEQDCRIAERIEQEGKGCLIVVNKWDTIPNKNQQTATYYEQDVREKLRAL 521
LVI+ + +T+QD ++A RIE++G+ C+IVVNKWD K+ T E+ +R++L L
Sbjct: 264 LLVIDVLDGVTDQDQKLAGRIEEDGRACVIVVNKWDA-HEKDSSTIYEVERQLRDRLYFL 322
Query: 522 DWAPIVYSTAIAGQSVDKIIVAAEMVDKERSRRLSTATINQVVQEAVAFKSPPRTRGGRR 581
DWAP+++ +A+ GQ V+KI+ V ++ RR+ T+ IN+V+ +A+A+++PP TR GR+
Sbjct: 323 DWAPMIFVSALTGQRVEKILDQVNTVVEQHRRRVGTSVINEVLGDAIAWRTPPTTRQGRQ 382
Query: 582 GRVYYCTQLLLGIFVRSAFRYGALGPLHIKYDLLQAAVRPPTFVFFVNDAKLFPETYRRY 641
GR+YY TQ+ +PP+F FVND KLF E+YRRY
Sbjct: 383 GRIYYGTQV---------------------------TTQPPSFTLFVNDPKLFGESYRRY 415
Query: 642 MEKQLRADAGFSGTPIRLLWRSRRKMEMKEGKS 674
+E+Q R GFSGTPIRL WR ++ E++ G +
Sbjct: 416 IERQFRESLGFSGTPIRLFWRGKKSRELERGAN 448
>sp|Q31KP9|DER_SYNE7 GTPase Der OS=Synechococcus elongatus (strain PCC 7942) GN=der PE=3
SV=1
Length = 453
Score = 431 bits (1107), Expect = e-119, Method: Compositional matrix adjust.
Identities = 240/513 (46%), Positives = 329/513 (64%), Gaps = 68/513 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAI+GRPNVGKS L NRL G AIV DEPGVTRDR Y +FW + +F +VDTGG+
Sbjct: 3 LPIVAILGRPNVGKSTLVNRLAGSREAIVHDEPGVTRDRTYQEAFWCDRDFTVVDTGGL- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ +D E +PL I QA A+ E+ + + +VDG
Sbjct: 62 --------VFDD-------DTEFLPL-------------IREQAELALAEAALAVLVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
QAGLTAAD EIADWLR + ++ I++AVNKCESP KG Q +EFWSLGF PLPIS+I G
Sbjct: 94 QAGLTAADNEIADWLR--HQNRPIVVAVNKCESPDKGAAQAAEFWSLGFGEPLPISSIHG 151
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
+GTGELLD V L+ + ++ +E I +AIVGRPNVGKSS+LN+ +GE R IVSP
Sbjct: 152 SGTGELLDRV---LELLPPADEAAGDETEI-GVAIVGRPNVGKSSLLNSFLGEQRAIVSP 207
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
I+GTTRDAIDT + Q++RL+DTAGIR++ + E +NR+F+AIRR+DV
Sbjct: 208 IAGTTRDAIDTVIERND-QRYRLVDTAGIRRKRGVDYG---PEFFGINRSFKAIRRADVC 263
Query: 462 ALVIEAMACITEQDCRIAERIEQEGKGCLIVVNKWDTIPNKNQQTATYYEQDVREKLRAL 521
LVI+ + +T+QD ++A RIE++G+ C+IVVNKWD K+ T E+ +R++L L
Sbjct: 264 LLVIDVLDGVTDQDQKLAGRIEEDGRACVIVVNKWDA-HEKDSSTIYEVERQLRDRLYFL 322
Query: 522 DWAPIVYSTAIAGQSVDKIIVAAEMVDKERSRRLSTATINQVVQEAVAFKSPPRTRGGRR 581
DWAP+++ +A+ GQ V+KI+ V ++ RR+ T+ IN+V+ +A+A+++PP TR GR+
Sbjct: 323 DWAPMIFVSALTGQRVEKILDQVNTVVEQHRRRVGTSVINEVLGDAIAWRTPPTTRQGRQ 382
Query: 582 GRVYYCTQLLLGIFVRSAFRYGALGPLHIKYDLLQAAVRPPTFVFFVNDAKLFPETYRRY 641
GR+YY TQ+ +PP+F FVND KLF E+YRRY
Sbjct: 383 GRIYYGTQV---------------------------TTQPPSFTLFVNDPKLFGESYRRY 415
Query: 642 MEKQLRADAGFSGTPIRLLWRSRRKMEMKEGKS 674
+E+Q R GFSGTPIRL WR ++ E++ G +
Sbjct: 416 IERQFRESLGFSGTPIRLFWRGKKSRELERGAN 448
>sp|Q0ICK8|DER_SYNS3 GTPase Der OS=Synechococcus sp. (strain CC9311) GN=der PE=3 SV=1
Length = 455
Score = 430 bits (1106), Expect = e-119, Method: Compositional matrix adjust.
Identities = 234/511 (45%), Positives = 319/511 (62%), Gaps = 72/511 (14%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAI+GRPNVGKS L NRL AIV D+PGVTRDR Y +WG+ EF +VDTGG++
Sbjct: 4 PVVAIIGRPNVGKSTLVNRLCRSREAIVHDQPGVTRDRTYQDGYWGDREFKVVDTGGLVF 63
Query: 224 VSKSQ--PNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
S+ P I E QA+ A+ E+ V + +VD
Sbjct: 64 DDDSEFLPEIRE-------------------------------QASLALAEASVALVIVD 92
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
GQ GLTAADE IA+WLR +LAVNKCESP +G+ +EFW LG P PISAI
Sbjct: 93 GQQGLTAADESIAEWLRTQNCK--TLLAVNKCESPEQGLGMAAEFWRLGLGEPHPISAIH 150
Query: 341 GTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
G GT ELLD V + L + D EE I ++I+GRPNVGKSS+LN++ GE R IVS
Sbjct: 151 GAGTAELLDQVLTFLPPKDEESD---EEEPI-QLSIIGRPNVGKSSLLNSICGETRAIVS 206
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
PI GTTRD IDT E +++RLIDTAGIR+R ++ E +NR+F+AI RSDV
Sbjct: 207 PIRGTTRDTIDTRIE-RENRRWRLIDTAGIRRRRSVNYG---PEFFGINRSFKAIERSDV 262
Query: 461 VALVIEAMACITEQDCRIAERIEQEGKGCLIVVNKWDTIPNKNQQTATYYEQDVREKLRA 520
LVI+A+ +TEQD R+A RIE++G+ C++VVNKWD + K+ T T E+++R KL
Sbjct: 263 CVLVIDALDGVTEQDQRLAGRIEEDGRACVVVVNKWDAV-EKDSHTMTAMEKELRAKLYF 321
Query: 521 LDWAPIVYSTAIAGQSVDKIIVAAEMVDKERSRRLSTATINQVVQEAVAFKSPPRTRGGR 580
LDWAP+++++A+ GQ VD I A + ++ RR+ST+ +N+V++EA++++SPP TRGGR
Sbjct: 322 LDWAPMLFTSALTGQRVDSIFALAALAVEQHRRRVSTSVVNEVLKEALSWRSPPTTRGGR 381
Query: 581 RGRVYYCTQLLLGIFVRSAFRYGALGPLHIKYDLLQAAVRPPTFVFFVNDAKLFPETYRR 640
+GR+YY TQ+ A RPP+F FVN+ KLF +TYRR
Sbjct: 382 QGRLYYGTQV---------------------------ASRPPSFTLFVNEPKLFGDTYRR 414
Query: 641 YMEKQLRADAGFSGTPIRLLWRSRRKMEMKE 671
Y+E+Q+R GF GTP++L WR +++ + ++
Sbjct: 415 YVERQIREGLGFDGTPVKLFWRGKQQRDAEK 445
>sp|A5GJ79|DER_SYNPW GTPase Der OS=Synechococcus sp. (strain WH7803) GN=der PE=3 SV=1
Length = 455
Score = 430 bits (1106), Expect = e-119, Method: Compositional matrix adjust.
Identities = 235/509 (46%), Positives = 319/509 (62%), Gaps = 78/509 (15%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAI+GRPNVGKS L NRL AIV DEPGVTRDR Y +WG+ +F +VDTGG++
Sbjct: 4 PVVAIIGRPNVGKSTLVNRLCHSREAIVHDEPGVTRDRTYQDGYWGDRDFKVVDTGGLVF 63
Query: 224 VSKSQ--PNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
S+ P I E QA A+EE+ V + +VD
Sbjct: 64 DDDSEFLPEIRE-------------------------------QAALALEEASVALVIVD 92
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
GQ G+TA+DE IA++LR +LAVNKCESP +G+ +EFWSLG P PISAI
Sbjct: 93 GQQGVTASDEAIAEFLRGQRCPA--LLAVNKCESPEQGLAMAAEFWSLGLGEPYPISAIH 150
Query: 341 GTGTGELLDLVCSEL--KKVEG-TEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRT 397
G GT ELLD V + L K EG +E+ ++ +AI+GRPNVGKSS+LNA+ GE R
Sbjct: 151 GAGTAELLDQVLTYLPPKSEEGDSEEPIQ-------LAIIGRPNVGKSSLLNAICGEQRA 203
Query: 398 IVSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRR 457
IVSPI GTTRD IDT E + +RL+DTAGIR+R ++ E +NR+F+AI R
Sbjct: 204 IVSPIRGTTRDTIDTSLV-RENRPWRLVDTAGIRRRRSVNYG---PEFFGINRSFKAIER 259
Query: 458 SDVVALVIEAMACITEQDCRIAERIEQEGKGCLIVVNKWDTIPNKNQQTATYYEQDVREK 517
SDV LVI+A+ +TEQD R+A RIE++G+ C++VVNKWD + K+ T T E+++R K
Sbjct: 260 SDVCVLVIDALDGVTEQDQRLAGRIEEDGRACVVVVNKWDAV-EKDSHTMTAMEKELRAK 318
Query: 518 LRALDWAPIVYSTAIAGQSVDKIIVAAEMVDKERSRRLSTATINQVVQEAVAFKSPPRTR 577
L LDWAP+++++A+ GQ VD I A + ++ RR+ST+ +N+V++EA++++SPP TR
Sbjct: 319 LYFLDWAPMLFTSALTGQRVDSIFALAALAVEQHRRRVSTSVVNEVLKEALSWRSPPTTR 378
Query: 578 GGRRGRVYYCTQLLLGIFVRSAFRYGALGPLHIKYDLLQAAVRPPTFVFFVNDAKLFPET 637
GGR+GR+YY TQ+ A RPP+F FVND KLF +T
Sbjct: 379 GGRQGRLYYGTQV---------------------------ASRPPSFTLFVNDPKLFGDT 411
Query: 638 YRRYMEKQLRADAGFSGTPIRLLWRSRRK 666
YRRY+E+Q+R GF GTP++L WR +++
Sbjct: 412 YRRYVERQIREGLGFDGTPLKLFWRGKQQ 440
>sp|Q7VDI8|DER_PROMA GTPase Der OS=Prochlorococcus marinus (strain SARG / CCMP1375 /
SS120) GN=der PE=3 SV=1
Length = 456
Score = 430 bits (1106), Expect = e-119, Method: Compositional matrix adjust.
Identities = 234/511 (45%), Positives = 316/511 (61%), Gaps = 72/511 (14%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAI+GRPNVGKS L NRL AIV D+PGVTRDR Y FWG+ EF LVDTGG++
Sbjct: 4 PIVAIIGRPNVGKSTLVNRLCQSREAIVHDQPGVTRDRSYQDGFWGDREFKLVDTGGLVF 63
Query: 224 VSKSQ--PNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+++ P I E QA A+ E+ + + +VD
Sbjct: 64 DDETEFLPEIRE-------------------------------QANLALSEASIALLIVD 92
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
GQ GLTAADE IA WLR + + I+LAVNKCES G+ EFW LG P P+SAI
Sbjct: 93 GQQGLTAADEVIAAWLRHSKCE--ILLAVNKCESVELGLSMAGEFWRLGLGEPYPVSAIH 150
Query: 341 GTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
G GTGELLD + S L E L+++E +AIVGRPNVGKSS+LNA+ GE R IVS
Sbjct: 151 GAGTGELLDRLISILPPKE----LIKDEEEPIQVAIVGRPNVGKSSLLNAICGEKRAIVS 206
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
I GTTRD IDT EG+ ++LIDTAGIR+R ++ E +NR+F+AI RSDV
Sbjct: 207 AIRGTTRDTIDTSIV-REGKLWKLIDTAGIRRRKSVNYG---PEFFGINRSFKAIERSDV 262
Query: 461 VALVIEAMACITEQDCRIAERIEQEGKGCLIVVNKWDTIPNKNQQTATYYEQDVREKLRA 520
LVI+A+ +TEQD R+A RIE+EG+ CL+VVNKWD + K+ T E+++R KL
Sbjct: 263 CVLVIDALDGVTEQDQRLAGRIEEEGRACLVVVNKWDAV-EKDTYTMPLMEKELRSKLYF 321
Query: 521 LDWAPIVYSTAIAGQSVDKIIVAAEMVDKERSRRLSTATINQVVQEAVAFKSPPRTRGGR 580
LDWA +++++A+ GQ +D I A + ++ RR+ST+ +N+VV +A++++SPP +RGGR
Sbjct: 322 LDWAQMLFTSALTGQRIDPIFSCASLAVEQHRRRVSTSVVNEVVYDALSWRSPPTSRGGR 381
Query: 581 RGRVYYCTQLLLGIFVRSAFRYGALGPLHIKYDLLQAAVRPPTFVFFVNDAKLFPETYRR 640
+GR+YY TQ+ A PP+F FVN+ KLF ++YRR
Sbjct: 382 QGRIYYATQV---------------------------ASSPPSFTLFVNEPKLFGDSYRR 414
Query: 641 YMEKQLRADAGFSGTPIRLLWRSRRKMEMKE 671
Y+E+QLR GF GTP++L WR ++K E+++
Sbjct: 415 YLERQLREGLGFEGTPLKLFWRGKQKREVEK 445
>sp|B7K1S0|DER_CYAP8 GTPase Der OS=Cyanothece sp. (strain PCC 8801) GN=der PE=3 SV=1
Length = 452
Score = 429 bits (1103), Expect = e-119, Method: Compositional matrix adjust.
Identities = 236/516 (45%), Positives = 321/516 (62%), Gaps = 71/516 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAI+GRPNVGKS L NRL G AIV DEPG+TRDR Y FW + +F +VDTGG+
Sbjct: 3 LPIVAIIGRPNVGKSTLANRLAGDQHAIVHDEPGITRDRTYRPGFWQDRDFQIVDTGGL- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ +D E +PL I Q+ AA+ E+ IF+VDG
Sbjct: 62 --------VFDD-------DTEFLPL-------------IREQSLAALNEASAAIFVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGF-SPLPISAISG 341
Q G T D EIADWLR+ + ++LAVNKCESP G++Q ++FW LG +P PIS I G
Sbjct: 94 QTGPTTGDLEIADWLRQQPVP--VLLAVNKCESPELGLIQATQFWELGLGNPYPISGIHG 151
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
GTGELLD + + L E + + + I +AI+GRPNVGKSS+LNAL+GE+R IVSP
Sbjct: 152 NGTGELLDDLITYLPPPEE----ITQSDEI-KVAIIGRPNVGKSSLLNALLGENRAIVSP 206
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
ISGTTRDAIDT E Q +RLIDTAGIR++ + E S+NRAF+AIRR DVV
Sbjct: 207 ISGTTRDAIDTVIQHNE-QTYRLIDTAGIRRKKNVEYGA---EFFSINRAFKAIRRCDVV 262
Query: 462 ALVIEAMACITEQDCRIAERIEQEGKGCLIVVNKWDTIPNKNQQTATYYEQDVREKLRAL 521
VI+A+ +T+QD ++A+RI +EG+ ++V+NKWD + +K+ T Y+ ++ +L +
Sbjct: 263 LFVIDAIDGVTDQDLKLADRIIEEGRSVVLVINKWDAV-DKDSYTIYEYKTNIFSRLYFM 321
Query: 522 DWAPIVYSTAIAGQSVDKIIVAAEMVDKERSRRLSTATINQVVQEAVAFKSPPRTRGGRR 581
+WAPI++ +A+ GQ V+KI+ +E RR++TA IN+V+QEAV + SPP TR G++
Sbjct: 322 EWAPIIFVSAMTGQRVNKILELVNSSTEEHRRRVTTAVINEVLQEAVTWHSPPTTRQGKQ 381
Query: 582 GRVYYCTQLLLGIFVRSAFRYGALGPLHIKYDLLQAAVRPPTFVFFVNDAKLFPETYRRY 641
G++YY TQ+ + +PPT FVND K F E YRRY
Sbjct: 382 GKIYYGTQV---------------------------STQPPTIALFVNDPKRFNENYRRY 414
Query: 642 MEKQLRADAGFSGTPIRLLWRSRRKMEMKEGKSASR 677
+E Q R GF GTPIRLLWR ++ E+++ SA+R
Sbjct: 415 IESQFRKQLGFPGTPIRLLWRGKKVREVEQ--SANR 448
>sp|A2C0J7|DER_PROM1 GTPase Der OS=Prochlorococcus marinus (strain NATL1A) GN=der PE=3
SV=1
Length = 456
Score = 426 bits (1096), Expect = e-118, Method: Compositional matrix adjust.
Identities = 231/523 (44%), Positives = 320/523 (61%), Gaps = 74/523 (14%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAI+GRPNVGKS L NRL AIV DEPGVTRDR Y FW + +F +VDTGG++
Sbjct: 3 LPVVAIIGRPNVGKSTLVNRLCQSREAIVHDEPGVTRDRTYQDGFWRDRDFKVVDTGGLV 62
Query: 223 NVSKSQ--PNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLV 280
S+ P I E QA A+EE+ V + +V
Sbjct: 63 FDDDSEFLPEIRE-------------------------------QANLALEEAVVALVIV 91
Query: 281 DGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAI 339
DGQ G+T ADE IA++LR ++ VNKCESP +G+ +EFW LG P PISAI
Sbjct: 92 DGQEGITTADESIAEFLRSRSCKTLVV--VNKCESPEQGLAMAAEFWKLGLGEPYPISAI 149
Query: 340 SGTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIV 399
G GTG+LLD V + ++DL E + +AI+GRPNVGKSS+LN++ GE R IV
Sbjct: 150 HGVGTGDLLDQVVNLFP----SKDLDEVSDSPVQLAIIGRPNVGKSSLLNSICGETRAIV 205
Query: 400 SPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSD 459
S I GTTRD IDT T +G++++L+DTAGIR+R ++ E +NR+F+AI RSD
Sbjct: 206 SSIRGTTRDTIDTRIT-HQGKEWKLVDTAGIRRRRSVNYG---PEFFGINRSFKAIERSD 261
Query: 460 VVALVIEAMACITEQDCRIAERIEQEGKGCLIVVNKWDTIPNKNQQTATYYEQDVREKLR 519
V LVI+A+ +TEQD R+A RIEQEG+ CLIV+NKWD + K+ T + E+D+R KL
Sbjct: 262 VCVLVIDALDGVTEQDQRLAGRIEQEGRACLIVINKWDAV-EKDSHTMSAMEKDIRSKLY 320
Query: 520 ALDWAPIVYSTAIAGQSVDKIIVAAEMVDKERSRRLSTATINQVVQEAVAFKSPPRTRGG 579
LDWA +++++A+ GQ V+ I A + + RR++T+ +N+V+ EA+ ++SPP TRGG
Sbjct: 321 FLDWAQMIFTSAVTGQRVEGIFALATLAVDQSRRRVTTSVVNEVLTEALKWRSPPTTRGG 380
Query: 580 RRGRVYYCTQLLLGIFVRSAFRYGALGPLHIKYDLLQAAVRPPTFVFFVNDAKLFPETYR 639
++GR+YY TQ+ A+ PP+F FVN+ KLF ETYR
Sbjct: 381 KQGRLYYGTQV---------------------------AINPPSFTLFVNEPKLFGETYR 413
Query: 640 RYMEKQLRADAGFSGTPIRLLWRSRRKMEMKEGKSASRTQANL 682
RY+E+Q+R GF GTPI+L WR +++ +++ K +R Q +
Sbjct: 414 RYIERQIREGLGFEGTPIKLFWRGKQQRDVE--KDMARQQKGV 454
>sp|B8HQE1|DER_CYAP4 GTPase Der OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=der
PE=3 SV=1
Length = 453
Score = 426 bits (1094), Expect = e-118, Method: Compositional matrix adjust.
Identities = 235/510 (46%), Positives = 314/510 (61%), Gaps = 74/510 (14%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKS L NRL G AIV D+PGVTRDR Y SFW + +F++VDTGG++
Sbjct: 3 LPVVAIVGRPNVGKSTLVNRLTGERVAIVHDQPGVTRDRTYRPSFWQDRDFLVVDTGGLV 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ E +PL I +Q A+ E+ V I +VDG
Sbjct: 63 FADDT----------------EFLPL-------------IRQQVVTALSEARVAILVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
Q G+TAADEEIA WLR+ + +++AVNKCESP++G+ Q +EFW LG P PISAI G
Sbjct: 94 QQGITAADEEIAQWLRQQSLP--VLVAVNKCESPQQGLAQGAEFWELGLGEPFPISAIHG 151
Query: 342 TGTGELLDLVCSELKKVE---GTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTI 398
GTGELLD V S L + G ED++ +AIVGRPNVGKSS+LNA+VGE R I
Sbjct: 152 NGTGELLDQVVSYLPPTDQQAGEEDIIN-------VAIVGRPNVGKSSLLNAVVGEQRAI 204
Query: 399 VSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRS 458
VSPISGTTRDAIDT +GQ++RLIDTAGIRK+ + E +NRAF+AI+R+
Sbjct: 205 VSPISGTTRDAIDT-LVERDGQRYRLIDTAGIRKQKNVDYG---PEFFGINRAFKAIQRA 260
Query: 459 DVVALVIEAMACITEQDCRIAERIEQEGKGCLIVVNKWDTIPNKNQQTATYYEQDVREKL 518
+VV LV++A+ +TEQD ++A RI EG C+IVVNKWD + K+ T Y+ V ++L
Sbjct: 261 EVVLLVLDALDGVTEQDQKLAGRIVDEGCACVIVVNKWDAV-EKDSYTIYDYQHQVEQRL 319
Query: 519 RALDWAPIVYSTAIAGQSVDKIIVAAEMVDKERSRRLSTATINQVVQEAVAFKSPPRTRG 578
+ W+ ++ +A GQ V+KI + ++ RR+ST+ IN+V+++AV + SPP +R
Sbjct: 320 NFIGWSDHIFISAATGQRVEKIFERVHLAAEQHRRRVSTSVINEVLEDAVGWHSPPASRQ 379
Query: 579 GRRGRVYYCTQLLLGIFVRSAFRYGALGPLHIKYDLLQAAVRPPTFVFFVNDAKLFPETY 638
GR+G++YY TQ+ + +PPT FVND LF + Y
Sbjct: 380 GRQGKIYYGTQV---------------------------SSQPPTIALFVNDPALFKDNY 412
Query: 639 RRYMEKQLRADAGFSGTPIRLLWRSRRKME 668
R+Y+E Q R GF GTPIRLLWR ++ E
Sbjct: 413 RKYIEGQFRKQLGFRGTPIRLLWRGKKVRE 442
>sp|Q2JV46|DER_SYNJA GTPase Der OS=Synechococcus sp. (strain JA-3-3Ab) GN=der PE=3 SV=1
Length = 459
Score = 426 bits (1094), Expect = e-118, Method: Compositional matrix adjust.
Identities = 236/522 (45%), Positives = 323/522 (61%), Gaps = 72/522 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VA+VGRPNVGKS+L NRL G AIV DEPG+TRDR+Y W +VDTGG++
Sbjct: 3 LPLVAVVGRPNVGKSSLVNRLAGVRSAIVHDEPGITRDRLYQEVEWNGRRLRVVDTGGLV 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
S E +P I +QA AA+ E+ +IF+VDG
Sbjct: 63 FGDDS----------------EFLP-------------HIRQQAMAAMAEAHAVIFVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ GLT AD+E+ADWLR+ + +++AVNKCES + G+ Q + FW LG P+P SA+ G
Sbjct: 94 REGLTPADKELADWLRRQPLP--VVVAVNKCESGQLGLAQAAAFWELGLGEPIPCSAVHG 151
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
G ELL+ V L +V ++ +E + I A+AIVGRPNVGKSS+LN LVG +R IVSP
Sbjct: 152 NGVAELLEAVLPHLPEV--AQEAADEPDPI-AVAIVGRPNVGKSSLLNRLVGSERAIVSP 208
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
I+GTTRDA+DT EGQ +RLIDTAGIR+++ + E S+NRAF+AI+RSDVV
Sbjct: 209 IAGTTRDAVDT-LVEWEGQSYRLIDTAGIRRKSRVEYG---VEFFSINRAFKAIQRSDVV 264
Query: 462 ALVIEAMACITEQDCRIAERIEQEGKGCLIVVNKWDTIPNKNQQTATYYEQDVREKLRAL 521
LVI+A+ +TEQD R+A RIE+EG+ C+IVVNKWD + NK+ T Y +++RE+L +
Sbjct: 265 LLVIDALEGVTEQDQRLAGRIEEEGRACIIVVNKWDAVENKDTHTINEYTREIRERLYFI 324
Query: 522 DWAPIVYSTAIAGQSVDKIIVAAEMVDKERSRRLSTATINQVVQEAVAFKSPPRTRGGRR 581
DWAP+++ +A+ GQ KI +R++T+ +N+V+Q+A+A++SPP R G++
Sbjct: 325 DWAPLLFVSALTGQRTHKIFAEVNTAVAAHRKRIATSVVNEVLQDALAWQSPPANRQGKQ 384
Query: 582 GRVYYCTQLLLGIFVRSAFRYGALGPLHIKYDLLQAAVRPPTFVFFVNDAKLFPETYRRY 641
G++YY TQ+ A RPPTF+ FVND LF E YRRY
Sbjct: 385 GKIYYGTQV---------------------------AERPPTFLLFVNDPDLFKENYRRY 417
Query: 642 MEKQLRADAGFSGTPIRLLWRSR------RKMEMKEGKSASR 677
+EK R + F+GTPIR WRS+ R ++ EG ASR
Sbjct: 418 LEKHFRQNLDFTGTPIRFRWRSKSERLVGRAVQKLEGSLASR 459
>sp|B7KHD2|DER_CYAP7 GTPase Der OS=Cyanothece sp. (strain PCC 7424) GN=der PE=3 SV=1
Length = 452
Score = 425 bits (1092), Expect = e-118, Method: Compositional matrix adjust.
Identities = 235/509 (46%), Positives = 312/509 (61%), Gaps = 69/509 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAI+GRPNVGKS L NRL G +AIV DEPG+TRDR Y +FW + +F +VDTGG+
Sbjct: 3 LPIVAIIGRPNVGKSTLVNRLAGDQQAIVHDEPGITRDRTYRPAFWQDRDFQVVDTGGL- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ +D E +PL I QA A+ E+ IF+VDG
Sbjct: 62 --------VFDD-------DTEFLPL-------------IREQAMTALAEAHAAIFVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
Q G T ADEEIA+WLR + IILAVNKCES +G++Q SEFW LG P PIS+I G
Sbjct: 94 QTGPTPADEEIANWLRSQSVP--IILAVNKCESVEQGLIQASEFWQLGLGEPYPISSIHG 151
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
+GTGELLD + L E + E N I +AIVGRPNVGKSS+LNAL GE+R IVSP
Sbjct: 152 SGTGELLDKLIIYLPTTES----LSETNEI-KVAIVGRPNVGKSSLLNALTGENRAIVSP 206
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
ISGTTRDAID E Q++RLIDTAGIR++ + E S+NRAF+AIRR+DVV
Sbjct: 207 ISGTTRDAIDMVVQRNE-QQYRLIDTAGIRRKKNVEYGA---EFFSINRAFKAIRRADVV 262
Query: 462 ALVIEAMACITEQDCRIAERIEQEGKGCLIVVNKWDTIPNKNQQTATYYEQDVREKLRAL 521
VI+A+ IT+QD ++A RI EG+ ++V+NKWD + +K+ T Y++ + +L +
Sbjct: 263 LFVIDALDGITDQDLKLAGRISDEGRATVLVINKWDAV-DKDSYTIYEYQKMLESRLYFM 321
Query: 522 DWAPIVYSTAIAGQSVDKIIVAAEMVDKERSRRLSTATINQVVQEAVAFKSPPRTRGGRR 581
DWA +++ +A+ G+ V+KI+ + RR+STA IN+V+QEA + SPP TR G++
Sbjct: 322 DWAEMIFVSALTGKRVEKILDLVDNATASHRRRVSTAVINEVLQEATTWHSPPTTRQGKQ 381
Query: 582 GRVYYCTQLLLGIFVRSAFRYGALGPLHIKYDLLQAAVRPPTFVFFVNDAKLFPETYRRY 641
G++YY TQ+ PPT FVND K F + YRRY
Sbjct: 382 GKIYYGTQI---------------------------KSEPPTITLFVNDPKRFNDNYRRY 414
Query: 642 MEKQLRADAGFSGTPIRLLWRSRRKMEMK 670
+E+Q R GF+GTPIRL+WR + E++
Sbjct: 415 IERQFRQQLGFTGTPIRLIWRGKSTREVE 443
>sp|Q46H20|DER_PROMT GTPase Der OS=Prochlorococcus marinus (strain NATL2A) GN=der PE=3
SV=1
Length = 456
Score = 424 bits (1091), Expect = e-117, Method: Compositional matrix adjust.
Identities = 230/523 (43%), Positives = 320/523 (61%), Gaps = 74/523 (14%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAI+GRPNVGKS L NRL AIV DEPGVTRDR Y FW + +F +VDTGG++
Sbjct: 3 LPVVAIIGRPNVGKSTLVNRLCQSREAIVHDEPGVTRDRTYQDGFWRDRDFKVVDTGGLV 62
Query: 223 NVSKSQ--PNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLV 280
S+ P I E QA A+EE+ V + +V
Sbjct: 63 FDDDSEFLPEIRE-------------------------------QANLALEEAVVALVIV 91
Query: 281 DGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAI 339
DGQ G+T ADE IA++LR ++ VNKCESP +G+ ++FW LG P PISAI
Sbjct: 92 DGQEGITTADESIAEFLRSRSGKTLVV--VNKCESPEQGLAMAAQFWKLGLGEPYPISAI 149
Query: 340 SGTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIV 399
G GTG+LLD V + ++DL E + +AI+GRPNVGKSS+LN++ GE R IV
Sbjct: 150 HGVGTGDLLDQVVNLFP----SKDLDEVSDSPVQLAIIGRPNVGKSSLLNSICGETRAIV 205
Query: 400 SPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSD 459
S I GTTRD IDT T +G++++L+DTAGIR+R ++ E +NR+F+AI RSD
Sbjct: 206 SSIRGTTRDTIDTRIT-HQGKEWKLVDTAGIRRRRSVNYG---PEFFGINRSFKAIERSD 261
Query: 460 VVALVIEAMACITEQDCRIAERIEQEGKGCLIVVNKWDTIPNKNQQTATYYEQDVREKLR 519
V LVI+A+ +TEQD R+A RIEQEG+ CLIV+NKWD + K+ T + E+D+R KL
Sbjct: 262 VCVLVIDALDGVTEQDQRLAGRIEQEGRACLIVINKWDAV-EKDSHTMSAMEKDIRSKLY 320
Query: 520 ALDWAPIVYSTAIAGQSVDKIIVAAEMVDKERSRRLSTATINQVVQEAVAFKSPPRTRGG 579
LDWA +++++A+ GQ V+ I A + + RR++T+ +N+V+ EA+ ++SPP TRGG
Sbjct: 321 FLDWAQMIFTSAVTGQRVEGIFALATLAVDQSRRRVTTSVVNEVLTEALKWRSPPTTRGG 380
Query: 580 RRGRVYYCTQLLLGIFVRSAFRYGALGPLHIKYDLLQAAVRPPTFVFFVNDAKLFPETYR 639
++GR+YY TQ+ A+ PP+F FVN+ KLF ETYR
Sbjct: 381 KQGRLYYGTQV---------------------------AINPPSFTLFVNEPKLFGETYR 413
Query: 640 RYMEKQLRADAGFSGTPIRLLWRSRRKMEMKEGKSASRTQANL 682
RY+E+Q+R GF GTPI+L WR +++ +++ K +R Q +
Sbjct: 414 RYIERQIREGLGFEGTPIKLFWRGKQQRDVE--KDMARQQKGV 454
>sp|Q7V8X0|DER_PROMM GTPase Der OS=Prochlorococcus marinus (strain MIT 9313) GN=der PE=3
SV=1
Length = 455
Score = 424 bits (1091), Expect = e-117, Method: Compositional matrix adjust.
Identities = 235/508 (46%), Positives = 311/508 (61%), Gaps = 76/508 (14%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAI+GRPNVGKS L NRL AIV D+PGVTRDR Y FWG+ EF +VDTGG++
Sbjct: 4 PIVAIIGRPNVGKSTLVNRLCRSREAIVDDKPGVTRDRTYQDGFWGDREFKVVDTGGLVF 63
Query: 224 VSKSQ--PNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
S+ P I E QA A+ E+ V + +VD
Sbjct: 64 DDDSEFLPEIRE-------------------------------QANLALAEASVALVIVD 92
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
GQ G+TAADE IA+WLR + AVNKCESP +G+ +EFW LG P PISAI
Sbjct: 93 GQQGVTAADESIAEWLRTQPCPTLV--AVNKCESPDQGLAMAAEFWRLGLGEPFPISAIH 150
Query: 341 GTGTGELLDLVCSEL--KKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTI 398
G GTG+LLD V S L K E EE+ +AI+GRPNVGKSS+LNA+ GE R I
Sbjct: 151 GAGTGDLLDRVLSLLPPKHEE------PEEDEPIQMAIIGRPNVGKSSLLNAICGEPRAI 204
Query: 399 VSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRS 458
VSPI GTTRD IDT EG +RLIDTAGIR+R ++ E +NR+F+AI RS
Sbjct: 205 VSPIRGTTRDTIDTRLE-REGHPWRLIDTAGIRRRRSVNYG---PEFFGINRSFKAIERS 260
Query: 459 DVVALVIEAMACITEQDCRIAERIEQEGKGCLIVVNKWDTIPNKNQQTATYYEQDVREKL 518
DV LVI+A+ +TEQD R+A RIE +G+ C++VVNKWD + K+ T E+++R KL
Sbjct: 261 DVCVLVIDALDGVTEQDQRLAGRIEDDGRACVLVVNKWDAV-EKDSHTMPMVEKELRAKL 319
Query: 519 RALDWAPIVYSTAIAGQSVDKIIVAAEMVDKERSRRLSTATINQVVQEAVAFKSPPRTRG 578
LDWA +++++A+ GQ V+ I A + ++ RR+ST+ +N+V++EA++++SPP +RG
Sbjct: 320 YFLDWATMLFTSALTGQRVESIFALASLAVEQHRRRVSTSVVNEVLKEALSWRSPPTSRG 379
Query: 579 GRRGRVYYCTQLLLGIFVRSAFRYGALGPLHIKYDLLQAAVRPPTFVFFVNDAKLFPETY 638
GR+GR+YY TQ+ A RPP+F FVND KLF +TY
Sbjct: 380 GRQGRLYYGTQV---------------------------ASRPPSFTLFVNDPKLFGDTY 412
Query: 639 RRYMEKQLRADAGFSGTPIRLLWRSRRK 666
RRY+E+QLR GF GTP++L WR +++
Sbjct: 413 RRYVERQLREGLGFDGTPLKLFWRGKQQ 440
>sp|B1XLH8|DER_SYNP2 GTPase Der OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 /
PR-6) GN=der PE=3 SV=1
Length = 453
Score = 422 bits (1086), Expect = e-117, Method: Compositional matrix adjust.
Identities = 238/511 (46%), Positives = 319/511 (62%), Gaps = 69/511 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +A++GRPNVGKS L NR+ G +AIV D+PG+TRDR Y FW + F +VDTGG+
Sbjct: 3 LPIIAVIGRPNVGKSTLVNRIAGDQQAIVHDQPGITRDRTYRPGFWQDRNFQIVDTGGI- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ +D E +PL I QA A+ E+ V +F+VDG
Sbjct: 62 --------VFDDHE-------EFLPL-------------IREQAAIALAEAAVALFVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGF-SPLPISAISG 341
QAGL AAD+EIADWLR+ + ++LAVNKCES +G Q +EFW LG P PISAI G
Sbjct: 94 QAGLNAADQEIADWLRQQNVP--VVLAVNKCESLEQGYTQAAEFWELGMEEPFPISAIHG 151
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
+GTG+LLD V L + VEE+ I +AI+GRPNVGKSS+LNAL GE R IVSP
Sbjct: 152 SGTGDLLDKVIEYLPTITD----VEEDTTI-NVAIIGRPNVGKSSLLNALTGEQRAIVSP 206
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
ISGTTRDAIDT GQ++RLIDTAGIR++ + E S+NRAF+AIRR+DVV
Sbjct: 207 ISGTTRDAIDT-IIERNGQQYRLIDTAGIRRKKNVDYGA---EFFSINRAFKAIRRADVV 262
Query: 462 ALVIEAMACITEQDCRIAERIEQEGKGCLIVVNKWDTIPNKNQQTATYYEQDVREKLRAL 521
VI+ + +TEQD ++A RI EG+ +IV NKWD + K+ T Y ++++ +L +
Sbjct: 263 LFVIDVLDGVTEQDLKLAGRIIDEGRAVIIVANKWDAV-EKDTYTINQYRKELQARLFFM 321
Query: 522 DWAPIVYSTAIAGQSVDKIIVAAEMVDKERSRRLSTATINQVVQEAVAFKSPPRTRGGRR 581
+WA +++ +A GQ V+KI+ + + RR+STA IN+V+QEAV++ SPP +R G++
Sbjct: 322 EWAEMLFISAQTGQRVNKILDLVDQAAESHRRRVSTAVINEVIQEAVSWHSPPTSRQGKQ 381
Query: 582 GRVYYCTQLLLGIFVRSAFRYGALGPLHIKYDLLQAAVRPPTFVFFVNDAKLFPETYRRY 641
GR+YY TQ VRS +PPT FVND K F ++YRRY
Sbjct: 382 GRIYYGTQ------VRS---------------------QPPTISLFVNDPKRFNDSYRRY 414
Query: 642 MEKQLRADAGFSGTPIRLLWRSRRKMEMKEG 672
+EKQ R D GF+GTPIRL+WR +R + + G
Sbjct: 415 IEKQFRQDLGFAGTPIRLVWRGKRVRDAERG 445
Score = 59.7 bits (143), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 93/210 (44%), Gaps = 44/210 (20%)
Query: 154 TIGNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEF 213
TI +V E VAI+GRPNVGKS+L N L G RAIV G TRD + ++
Sbjct: 167 TITDVEEDTTINVAIIGRPNVGKSSLLNALTGEQRAIVSPISGTTRDAIDTIIERNGQQY 226
Query: 214 MLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEES 273
L+DT G+ + + N+ G E + +A AI +
Sbjct: 227 RLIDTAGI----RRKKNV--------DYGAEFFSI---------------NRAFKAIRRA 259
Query: 274 CVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF------- 326
V++F++D G+T D ++A R + +I+ NK ++ K ++++
Sbjct: 260 DVVLFVIDVLDGVTEQDLKLAG--RIIDEGRAVIIVANKWDAVEKDTYTINQYRKELQAR 317
Query: 327 -----WSLGFSPLPISAISGTGTGELLDLV 351
W+ L ISA +G ++LDLV
Sbjct: 318 LFFMEWA---EMLFISAQTGQRVNKILDLV 344
Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 76/148 (51%), Gaps = 8/148 (5%)
Query: 370 RIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTG-PEGQKFRLIDTA 428
++P IA++GRPNVGKS+++N + G+ + IV G TRD T G + + F+++DT
Sbjct: 2 KLPIIAVIGRPNVGKSTLVNRIAGDQQAIVHDQPGITRDR--TYRPGFWQDRNFQIVDTG 59
Query: 429 GIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALVIEAMACITEQDCRIAERIEQEGKG 488
GI + L +A A+ + V V++ A + D IA+ + Q+
Sbjct: 60 GI-----VFDDHEEFLPLIREQAAIALAEAAVALFVVDGQAGLNAADQEIADWLRQQNVP 114
Query: 489 CLIVVNKWDTIPNKNQQTATYYEQDVRE 516
++ VNK +++ Q A ++E + E
Sbjct: 115 VVLAVNKCESLEQGYTQAAEFWELGMEE 142
>sp|B0JFL6|DER_MICAN GTPase Der OS=Microcystis aeruginosa (strain NIES-843) GN=der PE=3
SV=1
Length = 452
Score = 421 bits (1081), Expect = e-116, Method: Compositional matrix adjust.
Identities = 230/510 (45%), Positives = 311/510 (60%), Gaps = 69/510 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAI+GRPNVGKS L NR+ G +AIV D+PG+TRDR Y +FW + +F +VDTGG++
Sbjct: 3 LPVVAIIGRPNVGKSTLVNRIAGDQQAIVFDQPGITRDRTYQPAFWCDRDFQIVDTGGLV 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
S E +PL I QA A+ E+ V IF+VDG
Sbjct: 63 FNDDS----------------EFLPL-------------IREQALIALAEASVAIFVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
Q G+TA D EIA WLR+ + I+LAVNKCES +GI+Q +EFW L P PISAI G
Sbjct: 94 QGGITAGDREIAAWLRQQNVP--ILLAVNKCESVEQGILQATEFWELAIGEPFPISAIHG 151
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
+GTGELLD V L EN +AI+GRPNVGKSS+LNAL G+ R IVSP
Sbjct: 152 SGTGELLDAVIKYLPPAAEI-----PENEEIKVAIIGRPNVGKSSLLNALTGQQRAIVSP 206
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
ISGTTRD+IDT EGQ +RLIDTAGIR++ + E S+NRAF+AIRRSDVV
Sbjct: 207 ISGTTRDSIDT-LIEREGQVYRLIDTAGIRRKKNVDYGA---EFFSINRAFKAIRRSDVV 262
Query: 462 ALVIEAMACITEQDCRIAERIEQEGKGCLIVVNKWDTIPNKNQQTATYYEQDVREKLRAL 521
VI+ + +TEQD ++A RI +EG+ ++VVNKWD + K+ T Y + ++++L +
Sbjct: 263 LFVIDVLDGVTEQDLKLAGRIIEEGRAVVLVVNKWDAV-EKDTYTINTYTKMLQDRLYFM 321
Query: 522 DWAPIVYSTAIAGQSVDKIIVAAEMVDKERSRRLSTATINQVVQEAVAFKSPPRTRGGRR 581
DWA +++ +A+ GQ V KI+ ++ + RR+ST+ IN V++EAV + +PP TRGG++
Sbjct: 322 DWAEMIFVSAMTGQRVTKILELVDIAAESHRRRVSTSVINDVIEEAVKWHNPPTTRGGKQ 381
Query: 582 GRVYYCTQLLLGIFVRSAFRYGALGPLHIKYDLLQAAVRPPTFVFFVNDAKLFPETYRRY 641
G++YY TQ+ + +PPT FVND + F + YRRY
Sbjct: 382 GKLYYGTQV---------------------------SSQPPTIALFVNDPQRFNDNYRRY 414
Query: 642 MEKQLRADAGFSGTPIRLLWRSRRKMEMKE 671
+E Q R GF GTPIRL+WR + E+++
Sbjct: 415 IEGQFRQQLGFKGTPIRLIWRGKPAREVEK 444
Score = 63.9 bits (154), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 74/147 (50%), Gaps = 6/147 (4%)
Query: 370 RIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGPEGQKFRLIDTAG 429
++P +AI+GRPNVGKS+++N + G+ + IV G TRD + + F+++DT G
Sbjct: 2 KLPVVAIIGRPNVGKSTLVNRIAGDQQAIVFDQPGITRDRTYQPAFWCD-RDFQIVDTGG 60
Query: 430 IRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALVIEAMACITEQDCRIAERIEQEGKGC 489
+ + + S L +A A+ + V V++ IT D IA + Q+
Sbjct: 61 L-----VFNDDSEFLPLIREQALIALAEASVAIFVVDGQGGITAGDREIAAWLRQQNVPI 115
Query: 490 LIVVNKWDTIPNKNQQTATYYEQDVRE 516
L+ VNK +++ Q ++E + E
Sbjct: 116 LLAVNKCESVEQGILQATEFWELAIGE 142
Score = 57.0 bits (136), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 93/206 (45%), Gaps = 44/206 (21%)
Query: 158 VPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVD 217
+PE+ +VAI+GRPNVGKS+L N L G RAIV G TRD + + L+D
Sbjct: 171 IPENEEIKVAIIGRPNVGKSSLLNALTGQQRAIVSPISGTTRDSIDTLIEREGQVYRLID 230
Query: 218 TGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVII 277
T G+ + + N+ G E + +A AI S V++
Sbjct: 231 TAGI----RRKKNV--------DYGAEFFSI---------------NRAFKAIRRSDVVL 263
Query: 278 FLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF----------- 326
F++D G+T D ++A R + ++L VNK ++ K ++ +
Sbjct: 264 FVIDVLDGVTEQDLKLAG--RIIEEGRAVVLVVNKWDAVEKDTYTINTYTKMLQDRLYFM 321
Query: 327 -WSLGFSPLPISAISGTGTGELLDLV 351
W+ + +SA++G ++L+LV
Sbjct: 322 DWA---EMIFVSAMTGQRVTKILELV 344
>sp|Q3AZ65|DER_SYNS9 GTPase Der OS=Synechococcus sp. (strain CC9902) GN=der PE=3 SV=1
Length = 455
Score = 418 bits (1074), Expect = e-115, Method: Compositional matrix adjust.
Identities = 232/521 (44%), Positives = 323/521 (61%), Gaps = 78/521 (14%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAI+GRPNVGKS L NRL AIV D+PGVTRDR Y +WG+ EF +VDTGG++
Sbjct: 4 PVVAIIGRPNVGKSTLVNRLCRSREAIVHDQPGVTRDRTYQDGYWGDREFKVVDTGGLVF 63
Query: 224 VSKSQ--PNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
S+ P I E QA A++E+ V + +VD
Sbjct: 64 DDDSEFLPEIRE-------------------------------QAALALDEASVALVIVD 92
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G+ GLTAADE IA++LR+ +LAVNKCES +G+ +EFWSLG P PISAI
Sbjct: 93 GKQGLTAADESIAEFLRQQRCP--TLLAVNKCESVEQGLAMAAEFWSLGLGEPYPISAIH 150
Query: 341 GTGTGELLDLVCSEL--KKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTI 398
G GT E+LD V + L K EG +EE I ++I+GRPNVGKSS+LNA+ GE R I
Sbjct: 151 GAGTAEVLDQVLTFLPPKDQEG-----DEEEPI-QMSIIGRPNVGKSSLLNAICGEQRAI 204
Query: 399 VSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRS 458
VSPI GTTRD IDT E + +RL+DTAGIR+R ++ E +NR+F+AI RS
Sbjct: 205 VSPIRGTTRDTIDTNIV-RENRPWRLVDTAGIRRRRSVNYG---PEYFGINRSFKAIERS 260
Query: 459 DVVALVIEAMACITEQDCRIAERIEQEGKGCLIVVNKWDTIPNKNQQTATYYEQDVREKL 518
DV LVI+A+ +TEQD R+A RIE++G+ C++VVNKWD + K+ T + E+++R KL
Sbjct: 261 DVCVLVIDALDGVTEQDQRLAGRIEEDGRACVVVVNKWDAV-EKDSHTMSATEKELRAKL 319
Query: 519 RALDWAPIVYSTAIAGQSVDKIIVAAEMVDKERSRRLSTATINQVVQEAVAFKSPPRTRG 578
LDWAP+++++A+ GQ V+ I A + ++ RR++T+ +N+V++EA++++SPP TRG
Sbjct: 320 YFLDWAPMLFTSALTGQRVESIFALAALAVEQHRRRVTTSVVNEVLKEALSWRSPPTTRG 379
Query: 579 GRRGRVYYCTQLLLGIFVRSAFRYGALGPLHIKYDLLQAAVRPPTFVFFVNDAKLFPETY 638
GR+G++YY TQ+ A RPP+F FVND KLF +TY
Sbjct: 380 GRQGKLYYGTQV---------------------------ASRPPSFTLFVNDPKLFGDTY 412
Query: 639 RRYMEKQLRADAGFSGTPIRLLWRSRRKMEMKEGKSASRTQ 679
RRY+E+ +R GF GTP++L WR +++ + + K +R Q
Sbjct: 413 RRYVERHIREGLGFDGTPLKLFWRGKQQRDAE--KELARQQ 451
>sp|Q2JM09|DER_SYNJB GTPase Der OS=Synechococcus sp. (strain JA-2-3B'a(2-13)) GN=der
PE=3 SV=1
Length = 459
Score = 415 bits (1067), Expect = e-115, Method: Compositional matrix adjust.
Identities = 238/524 (45%), Positives = 320/524 (61%), Gaps = 68/524 (12%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKS L NR+ G AIV DEPGVTRDR+Y W +VDTGG++
Sbjct: 3 LPLVAIVGRPNVGKSTLVNRMAGVRSAIVHDEPGVTRDRLYQEVEWNGRRLRVVDTGGLV 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
S E +P I +QA AA+ E+ +IF+VDG
Sbjct: 63 FGDDS----------------EFLP-------------HIRQQAMAAMAEAQAVIFVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ GLT AD E+ADWLRK + +++AVNKCES + G+ Q + FW LG P+P S I G
Sbjct: 94 REGLTPADVEVADWLRKQPLP--VVVAVNKCESGQMGLAQAAAFWELGLGDPIPCSGIHG 151
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
G ELL+ V + L +V T + E + I A++IVGRPNVGKSS+LN LVG +R IVSP
Sbjct: 152 NGVAELLEAVLAHLPEV--TAEAAGEPDPI-AVSIVGRPNVGKSSLLNRLVGSERAIVSP 208
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
ISGTTRDAIDT T EGQ +RLIDTAGIRK+ + E S+NRAF+AI+RSD V
Sbjct: 209 ISGTTRDAIDTVVTW-EGQPYRLIDTAGIRKKNRVQYG---IEFFSINRAFKAIQRSDAV 264
Query: 462 ALVIEAMACITEQDCRIAERIEQEGKGCLIVVNKWDTIPNKNQQTATYYEQDVREKLRAL 521
LVI+A+ +TEQD R+A RIE+EG+ C++VVNKWD + NK+ T + +++R++L +
Sbjct: 265 LLVIDALEGVTEQDQRLAGRIEEEGRACVVVVNKWDAVENKDTHTINEFTREIRDRLYFI 324
Query: 522 DWAPIVYSTAIAGQSVDKIIVAAEMVDKERSRRLSTATINQVVQEAVAFKSPPRTRGGRR 581
+WAP+++ +A+ GQ KI V +R+ TA +N+V+Q+A+A++SPP R G++
Sbjct: 325 EWAPLLFVSALTGQRTHKIFEQVNTVVAAHRKRVPTAVVNEVLQDALAWQSPPTNRQGKQ 384
Query: 582 GRVYYCTQLLLGIFVRSAFRYGALGPLHIKYDLLQAAVRPPTFVFFVNDAKLFPETYRRY 641
GR+YY TQ+ A RPPTFV FVND LF + YRR+
Sbjct: 385 GRIYYGTQV---------------------------ADRPPTFVLFVNDPDLFKDNYRRF 417
Query: 642 MEKQLRADAGFSGTPIRLLWRSRRKMEMKEGKSASRTQANLVPR 685
+EK R + F+GTPIR LWR K E G++ + + +L R
Sbjct: 418 LEKHFRQNLDFTGTPIRFLWRG--KSERLVGRAVRKLERSLTSR 459
>sp|B1X0B0|DER_CYAA5 GTPase Der OS=Cyanothece sp. (strain ATCC 51142) GN=der PE=3 SV=1
Length = 452
Score = 415 bits (1067), Expect = e-115, Method: Compositional matrix adjust.
Identities = 228/509 (44%), Positives = 317/509 (62%), Gaps = 69/509 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAI+GRPNVGKS L NRL +AIV D+PG+TRDR Y +FW + +F +VDTGG+
Sbjct: 3 LPIVAIIGRPNVGKSTLVNRLAKDRQAIVHDQPGITRDRTYRPAFWCDRDFQVVDTGGL- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ +D E +PL I QA AA+ E+ IF+VDG
Sbjct: 62 --------VFDD-------DTEFLPL-------------IREQAMAALTEASAAIFVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
Q G TA D EI+DWLR+ + ++LAVNKCESP G++Q +EFW LG P PIS I G
Sbjct: 94 QLGPTAGDREISDWLRRQKVP--VLLAVNKCESPEMGLIQAAEFWELGLGEPYPISGIHG 151
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
+GTGELLD + + L + D EE N ++I+GRPNVGKSS+LNA +GE R IVSP
Sbjct: 152 SGTGELLDQLITYLPSPDELPDR-EEIN----VSIIGRPNVGKSSLLNAFLGEQRAIVSP 206
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
ISGTTRDAIDT + +RLIDTAGIR++ + E S+NRAF+AIRR+DVV
Sbjct: 207 ISGTTRDAIDTVVERGD-NTYRLIDTAGIRRKKNVNYGA---EFFSINRAFKAIRRADVV 262
Query: 462 ALVIEAMACITEQDCRIAERIEQEGKGCLIVVNKWDTIPNKNQQTATYYEQDVREKLRAL 521
LVI+A+ +T+QD ++A+RI EG+ +IVVNKWD + K+ T Y+Q V ++L +
Sbjct: 263 LLVIDAIDGVTDQDIKLADRIIDEGRAAIIVVNKWDAV-EKDSYTIYDYKQKVMDRLYFM 321
Query: 522 DWAPIVYSTAIAGQSVDKIIVAAEMVDKERSRRLSTATINQVVQEAVAFKSPPRTRGGRR 581
+WA I++ +A++G+ V+ I ++ +E RR++T+ +N+V++EAV + SPP T+ G++
Sbjct: 322 EWADIIFVSAMSGKRVENIFELVDVAVEEHRRRVNTSVVNEVLEEAVKWHSPPTTKQGKQ 381
Query: 582 GRVYYCTQLLLGIFVRSAFRYGALGPLHIKYDLLQAAVRPPTFVFFVNDAKLFPETYRRY 641
GR+YY TQ+ + +PPT FVND K F + YRRY
Sbjct: 382 GRIYYGTQV---------------------------SSQPPTIALFVNDPKRFNDNYRRY 414
Query: 642 MEKQLRADAGFSGTPIRLLWRSRRKMEMK 670
+E+Q R GF GTPIRLLWR ++ +++
Sbjct: 415 IERQFREQIGFPGTPIRLLWRGKKTRDVE 443
>sp|A9BE09|DER_PROM4 GTPase Der OS=Prochlorococcus marinus (strain MIT 9211) GN=der PE=3
SV=1
Length = 456
Score = 414 bits (1065), Expect = e-115, Method: Compositional matrix adjust.
Identities = 233/520 (44%), Positives = 321/520 (61%), Gaps = 70/520 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAI+GRPNVGKS L NRL G AIV D+PGVTRDR Y +FW + EF +VDTGG++
Sbjct: 4 PIVAIIGRPNVGKSTLVNRLCGSREAIVDDQPGVTRDRTYQDAFWADREFKVVDTGGLVF 63
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+S E +P I +QA A+ E+ V + +VDGQ
Sbjct: 64 DDES----------------EFLP-------------EIRQQAKLALSEASVALIVVDGQ 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+T AD+EIA WLR + + ++AVNKCESP +G+ ++FWSLG P P+SAI G+
Sbjct: 95 EGVTTADKEIASWLR--HCECPTLVAVNKCESPEQGLAMAADFWSLGLGEPYPVSAIHGS 152
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
GTGELLD V L E +E+ E +AI+GRPNVGKSS+LN++ GE R IVS I
Sbjct: 153 GTGELLDQVILLLPSKESSEEEDEPIQ----LAIIGRPNVGKSSLLNSICGETRAIVSSI 208
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
GTTRD IDT E Q ++LIDTAGIR+R +++ E +NR+ +AI RSDV
Sbjct: 209 RGTTRDTIDT-LLKREQQAWKLIDTAGIRRRRSVSYG---PEYFGINRSLKAIERSDVCL 264
Query: 463 LVIEAMACITEQDCRIAERIEQEGKGCLIVVNKWDTIPNKNQQTATYYEQDVREKLRALD 522
LVI+A+ +TEQD R+A RIEQEGK CL+VVNKWD + K+ T E+++R KL LD
Sbjct: 265 LVIDALDGVTEQDQRLAGRIEQEGKACLVVVNKWDAV-EKDTYTMPLMEKELRSKLYFLD 323
Query: 523 WAPIVYSTAIAGQSVDKIIVAAEMVDKERSRRLSTATINQVVQEAVAFKSPPRTRGGRRG 582
WA +++++A+ GQ V I A + ++ RR+ST+ +N+V+ EA+ ++SPP TRGGR+G
Sbjct: 324 WADMLFTSALTGQRVQLIFNLASLAVEQHRRRVSTSVVNEVLSEALTWRSPPTTRGGRQG 383
Query: 583 RVYYCTQLLLGIFVRSAFRYGALGPLHIKYDLLQAAVRPPTFVFFVNDAKLFPETYRRYM 642
R+YY TQ+ + +PP+F FVN+ KLF ++YRRY+
Sbjct: 384 RLYYGTQV---------------------------STQPPSFSLFVNEPKLFGDSYRRYI 416
Query: 643 EKQLRADAGFSGTPIRLLWRSRRKMEMKEGKSASRTQANL 682
E+QLR GF GTP++L WR +++ + K +R + NL
Sbjct: 417 ERQLREGLGFEGTPLKLFWRGKQQRAAQ--KDLARQKENL 454
>sp|A2BV51|DER_PROM5 GTPase Der OS=Prochlorococcus marinus (strain MIT 9515) GN=der PE=3
SV=1
Length = 458
Score = 409 bits (1052), Expect = e-113, Method: Compositional matrix adjust.
Identities = 228/525 (43%), Positives = 317/525 (60%), Gaps = 70/525 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +AI+GRPNVGKS L NRL N AIV D+PGVTRDR Y + WG EF +VDTGG+
Sbjct: 3 LPSIAIIGRPNVGKSTLVNRLCQSNDAIVFDKPGVTRDRTYQNASWGGKEFQVVDTGGL- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ ED + E +P I Q A+EE+ + +F+VDG
Sbjct: 62 --------VFEDDS-------EFLP-------------EIRTQVFLALEEASIALFVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
G+T D IA WLR + D I+AVNKCES GI SEFW LG P P+SAI G
Sbjct: 94 NQGVTTGDLSIAKWLRNS--DCKTIVAVNKCESLSLGISMASEFWKLGLGEPYPVSAIHG 151
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
+GTG+LLDLV EL K ED +E+++ ++I+GRPNVGKSS+LNA+ GE R IVS
Sbjct: 152 SGTGDLLDLVIDELPKDFDVED---KEDKV-MMSIIGRPNVGKSSLLNAICGEKRAIVSD 207
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
ISGTT D+IDT ++++DTAGIR++ + TE +NRAF++I RSDV
Sbjct: 208 ISGTTTDSIDT-LIKKNSHLWKIVDTAGIRRKKNVKYG---TEFFGINRAFKSIDRSDVC 263
Query: 462 ALVIEAMACITEQDCRIAERIEQEGKGCLIVVNKWDTIPNKNQQTATYYEQDVREKLRAL 521
LVI+A+ +T+QD ++A RIE++G+ C+IVVNKWD + KN T E+++R KL L
Sbjct: 264 VLVIDAIDGVTDQDQKLAGRIEEQGRACVIVVNKWDLV-EKNNSTIYQVEKELRSKLYFL 322
Query: 522 DWAPIVYSTAIAGQSVDKIIVAAEMVDKERSRRLSTATINQVVQEAVAFKSPPRTRGGRR 581
W+ +++ +A+ GQ V+ I A + R++T+ +N+V++EA+ +KSPP R G++
Sbjct: 323 HWSKMIFISALTGQRVENIFEHALNAVTQHRMRVTTSVVNEVLKEALGWKSPPTKRSGKQ 382
Query: 582 GRVYYCTQLLLGIFVRSAFRYGALGPLHIKYDLLQAAVRPPTFVFFVNDAKLFPETYRRY 641
GR+YY TQ+ +PPTF FVND KLF TYRRY
Sbjct: 383 GRLYYGTQV---------------------------KNQPPTFTLFVNDPKLFGITYRRY 415
Query: 642 MEKQLRADAGFSGTPIRLLWRSRRKMEMKEGKSASRTQANLVPRD 686
+EKQ+R + GF G+PI LLWR ++K +++ K S+ N++ +D
Sbjct: 416 IEKQIRLNLGFEGSPIILLWRGKQKRDLE--KETSKKNINIIQKD 458
>sp|P74120|DER_SYNY3 GTPase Der OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=der
PE=3 SV=1
Length = 452
Score = 407 bits (1047), Expect = e-112, Method: Compositional matrix adjust.
Identities = 228/522 (43%), Positives = 314/522 (60%), Gaps = 73/522 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAI+GRPNVGKS NRL G +AIV D+PG+TRDR Y +FW + +F +VDTGG++
Sbjct: 3 LPIVAIIGRPNVGKSTFVNRLAGNQQAIVHDQPGITRDRTYRPAFWRDRDFQVVDTGGLV 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
S E +P I QA A+ E+ IF+VDG
Sbjct: 63 FNDDS----------------EFLP-------------EIREQANLALAEAKAAIFVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
Q G TA+DEEIA WLR+ + +ILAVNKCESP +G +Q +EFW LG P P+SAI G
Sbjct: 94 QQGPTASDEEIAQWLRQQSVP--VILAVNKCESPDQGAIQAAEFWHLGLGEPYPMSAIHG 151
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
+GTG+LLD + L + E+ E+E + +AIVGRPNVGKSS+LNAL GE R IVSP
Sbjct: 152 SGTGDLLDALLEYLPAPQ--EEPEEDEIK---VAIVGRPNVGKSSLLNALTGEQRAIVSP 206
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
ISGTTRDAID GQK+RLIDTAGIR++ + E +NRAF+AIRR+DVV
Sbjct: 207 ISGTTRDAIDM-VVERNGQKYRLIDTAGIRRKKNVDYGA---EFFGINRAFKAIRRADVV 262
Query: 462 ALVIEAMACITEQDCRIAERIEQEGKGCLIVVNKWDTIPNKNQQTATYYEQDVREKLRAL 521
V++ + +TEQD ++A RI ++G+ ++V+NKWD + K+ T + + + +L +
Sbjct: 263 LFVLDVLDGVTEQDLKLAGRIIEDGRAVVLVINKWDAV-EKDSYTIYEHREQLMARLYFM 321
Query: 522 DWAPIVYSTAIAGQSVDKIIVAAEMVDKERSRRLSTATINQVVQEAVAFKSPPRTRGGRR 581
DWA +++ +A G V KI+ ++ +E RR++TA IN+V++EAV++ SPP TR G++
Sbjct: 322 DWAEMIFVSAQTGLRVQKILDCVDIAAQEHRRRVTTAVINEVLEEAVSWHSPPTTRQGKQ 381
Query: 582 GRVYYCTQLLLGIFVRSAFRYGALGPLHIKYDLLQAAVRPPTFVFFVNDAKLFPETYRRY 641
G++YY TQ+ + +PP FVND F + YRRY
Sbjct: 382 GKIYYGTQV---------------------------STQPPAIALFVNDPNRFNDNYRRY 414
Query: 642 MEKQLRADAGFSGTPIRLLWRSRRKMEMKEGKSASRTQANLV 683
+EKQ R GF G+PIRL WR ++ EM+ SR +A V
Sbjct: 415 IEKQFRKQLGFFGSPIRLFWRGKKVREME----GSRNRATKV 452
Score = 53.5 bits (127), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 78/167 (46%), Gaps = 29/167 (17%)
Query: 159 PEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDT 218
PE +VAIVGRPNVGKS+L N L G RAIV G TRD + ++ L+DT
Sbjct: 172 PEEDEIKVAIVGRPNVGKSSLLNALTGEQRAIVSPISGTTRDAIDMVVERNGQKYRLIDT 231
Query: 219 GGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIF 278
G+ + + N+ G E + +A AI + V++F
Sbjct: 232 AGI----RRKKNV--------DYGAEFFGI---------------NRAFKAIRRADVVLF 264
Query: 279 LVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSE 325
++D G+T D ++A + ++ + ++L +NK ++ K + E
Sbjct: 265 VLDVLDGVTEQDLKLAGRIIED--GRAVVLVINKWDAVEKDSYTIYE 309
>sp|B0C1P2|DER_ACAM1 GTPase Der OS=Acaryochloris marina (strain MBIC 11017) GN=der PE=3
SV=1
Length = 453
Score = 405 bits (1041), Expect = e-112, Method: Compositional matrix adjust.
Identities = 222/519 (42%), Positives = 312/519 (60%), Gaps = 69/519 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKS L NRL G AIV D PGVTRDR Y + W +F LVDTGG+
Sbjct: 3 LPIVAIVGRPNVGKSTLVNRLTGMMDAIVHDSPGVTRDRTYRPALWNGRDFSLVDTGGL- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ +D E +P I +Q A+ E+ V++ +VDG
Sbjct: 62 --------VFDDQT-------EFLPF-------------IRQQVMIALAEATVVVMVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGF-SPLPISAISG 341
QAG T AD EIA WLR+ D ++LAVNKCESP +GI Q ++FW L PLP+S I G
Sbjct: 94 QAGPTPADHEIAHWLRQQ--DTPVLLAVNKCESPEQGITQAAQFWELSLDEPLPVSGIHG 151
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
GTG+LLD V + +ED E + +A+VGRPNVGKSS+LNA VGE+R+IVSP
Sbjct: 152 NGTGDLLDQVVEYFSETPESEDEPEIK-----VALVGRPNVGKSSLLNAFVGENRSIVSP 206
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
ISGTTRD ID E Q +R IDTAGIR++ ++ E +NRAF+AIRRS VV
Sbjct: 207 ISGTTRDTIDMVVRRGE-QTYRFIDTAGIRRKKNVSYG---PEFFGINRAFKAIRRSQVV 262
Query: 462 ALVIEAMACITEQDCRIAERIEQEGKGCLIVVNKWDTIPNKNQQTATYYEQDVREKLRAL 521
VI+A+ +TEQD ++A RI +G+ C++VVNKWD + K+ T + + +R +L +
Sbjct: 263 LFVIDALDGVTEQDQKLAGRIIDDGRACVLVVNKWDAV-TKDTYTINEFSKQIRSRLNFM 321
Query: 522 DWAPIVYSTAIAGQSVDKIIVAAEMVDKERSRRLSTATINQVVQEAVAFKSPPRTRGGRR 581
+WA +++ +A GQ V+KI+ + ++ +R++T+ IN+V++EAV++ +PP TR GR+
Sbjct: 322 EWAEMIFVSAQTGQRVEKILNLVDTAARQFEQRVTTSVINEVLEEAVSWHTPPTTRQGRQ 381
Query: 582 GRVYYCTQLLLGIFVRSAFRYGALGPLHIKYDLLQAAVRPPTFVFFVNDAKLFPETYRRY 641
G++YY TQ+ + +PPT FVN+ F + YRRY
Sbjct: 382 GKIYYGTQV---------------------------SSQPPTIALFVNNPDHFKDNYRRY 414
Query: 642 MEKQLRADAGFSGTPIRLLWRSRRKMEMKEGKSASRTQA 680
+E+Q R + F+GTPIRLLWR ++ +++ + T+A
Sbjct: 415 IERQFRENLDFTGTPIRLLWRGKKLRDVERNTANRATRA 453
>sp|Q31CE7|DER_PROM9 GTPase Der OS=Prochlorococcus marinus (strain MIT 9312) GN=der PE=3
SV=1
Length = 457
Score = 405 bits (1040), Expect = e-112, Method: Compositional matrix adjust.
Identities = 224/526 (42%), Positives = 314/526 (59%), Gaps = 71/526 (13%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+LP +AI+GRPNVGKS L NRL N AIV D+PGVTRDR Y + WG EF +VDTGG+
Sbjct: 2 ILPTIAIIGRPNVGKSTLVNRLCQSNDAIVFDKPGVTRDRTYQNASWGGKEFQIVDTGGL 61
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+ +D + E +P I Q A+EE+ + + +VD
Sbjct: 62 ---------VFDDDS-------EFLP-------------EIRAQVFLALEEASLALLVVD 92
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G G+T D IA WLR + I+AVNKCES GI SEFW LG P P+SAI
Sbjct: 93 GNQGVTDGDLSIAKWLRNSSCKT--IIAVNKCESTTLGISLASEFWKLGLGEPYPVSAIH 150
Query: 341 GTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
G+GTG+LLDLV EL E+ ++EE ++I+GRPNVGKSS+LN++ GE R IVS
Sbjct: 151 GSGTGDLLDLVIGEL-----PENNIQEEEEKIMMSIIGRPNVGKSSLLNSISGEKRAIVS 205
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
ISGTT D+IDT + Q ++++DTAGIR++ + TE +NRAF++I RSDV
Sbjct: 206 DISGTTTDSIDTLIKKGDTQ-WKIVDTAGIRRKKNVKYG---TEFFGINRAFKSIDRSDV 261
Query: 461 VALVIEAMACITEQDCRIAERIEQEGKGCLIVVNKWDTIPNKNQQTATYYEQDVREKLRA 520
LVI+A+ +T+QD ++A RIE++G+ C+IV+NKWD + KN T E+++R KL
Sbjct: 262 CVLVIDAIDGVTDQDQKLAGRIEEQGRACIIVINKWDLV-EKNSSTIYQVEKELRSKLYF 320
Query: 521 LDWAPIVYSTAIAGQSVDKIIVAAEMVDKERSRRLSTATINQVVQEAVAFKSPPRTRGGR 580
L W+ +++ +A+ GQ VD I A + RR++T+ +N+V++E++++KSPP R G+
Sbjct: 321 LHWSKMIFISALTGQRVDNIFEHALKAVNQHRRRVATSVVNEVLKESISWKSPPTKRSGK 380
Query: 581 RGRVYYCTQLLLGIFVRSAFRYGALGPLHIKYDLLQAAVRPPTFVFFVNDAKLFPETYRR 640
+GR+YY TQ+ +PPTF FVND KLF TYRR
Sbjct: 381 QGRLYYGTQV---------------------------KNKPPTFTLFVNDPKLFGITYRR 413
Query: 641 YMEKQLRADAGFSGTPIRLLWRSRRKMEMKEGKSASRTQANLVPRD 686
Y+EKQ+R + GF GTP+ LLWR +++ + K R LV +D
Sbjct: 414 YIEKQIRLNLGFEGTPLILLWRGKQQRALN--KEVERGNIELVQKD 457
>sp|A2BPL9|DER_PROMS GTPase Der OS=Prochlorococcus marinus (strain AS9601) GN=der PE=3
SV=1
Length = 457
Score = 402 bits (1033), Expect = e-111, Method: Compositional matrix adjust.
Identities = 223/526 (42%), Positives = 312/526 (59%), Gaps = 71/526 (13%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+LP +AI+GRPNVGKS L NRL N AIV D+PGVTRDR Y + WG EF +VDTGG+
Sbjct: 2 ILPTIAIIGRPNVGKSTLVNRLCQSNDAIVFDKPGVTRDRTYQNASWGGKEFQIVDTGGL 61
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+ +S E +P I Q A+EE+ + + +VD
Sbjct: 62 VFDDES----------------EFLP-------------EIRTQVFLALEEASLALLVVD 92
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G G+T D IA WLR + I+AVNKCES GI SEFW LG P P+SAI
Sbjct: 93 GNQGVTDGDLSIAKWLRNSSCKT--IVAVNKCESTTLGISLASEFWKLGLGEPNPVSAIH 150
Query: 341 GTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
G+GTG+LLDLV EL E+ ++++ ++I+GRPNVGKSS+LN++ GE R IVS
Sbjct: 151 GSGTGDLLDLVIGEL-----PENNIQDDEEKIMMSIIGRPNVGKSSLLNSICGEKRAIVS 205
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
ISGTT D+IDT + +++IDTAGIR++ + TE +NRAF++I RSDV
Sbjct: 206 DISGTTTDSIDTLIKKGD-NNWKIIDTAGIRRKKNVKYG---TEFFGINRAFKSIDRSDV 261
Query: 461 VALVIEAMACITEQDCRIAERIEQEGKGCLIVVNKWDTIPNKNQQTATYYEQDVREKLRA 520
LVI+A+ +T+QD ++A RIE++G+ C+IVVNKWD I KN T E+++R KL
Sbjct: 262 CVLVIDAVDGVTDQDQKLAGRIEEQGRACIIVVNKWDLIE-KNSSTIYQVEKELRSKLYF 320
Query: 521 LDWAPIVYSTAIAGQSVDKIIVAAEMVDKERSRRLSTATINQVVQEAVAFKSPPRTRGGR 580
L W+ +++ +A+ GQ VD I A + RR++T+ +N+V++E++++KSPP R G+
Sbjct: 321 LHWSKMIFISALTGQRVDNIFEHALNAVNQHRRRVTTSVVNEVLKESISWKSPPTKRSGK 380
Query: 581 RGRVYYCTQLLLGIFVRSAFRYGALGPLHIKYDLLQAAVRPPTFVFFVNDAKLFPETYRR 640
+GR+YY TQ+ +PPTF FVND KLF TYRR
Sbjct: 381 QGRLYYGTQV---------------------------KNKPPTFTLFVNDPKLFGITYRR 413
Query: 641 YMEKQLRADAGFSGTPIRLLWRSRRKMEMKEGKSASRTQANLVPRD 686
Y+EKQ+R + GF GTP+ LLWR +++ + K R L+ +D
Sbjct: 414 YIEKQIRVNLGFEGTPLILLWRGKQQRALN--KEVERENIELIQKD 457
>sp|Q7V2S6|DER_PROMP GTPase Der OS=Prochlorococcus marinus subsp. pastoris (strain
CCMP1986 / MED4) GN=der PE=3 SV=1
Length = 458
Score = 402 bits (1032), Expect = e-111, Method: Compositional matrix adjust.
Identities = 224/525 (42%), Positives = 314/525 (59%), Gaps = 70/525 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +AI+GRPNVGKS L NRL N AIV D+PGVTRDR Y + W EF +VDTGG+
Sbjct: 3 LPSIAIIGRPNVGKSTLVNRLCQSNDAIVFDKPGVTRDRTYQNASWAGREFQVVDTGGL- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ ED + E +P I Q A+EE+ + +F+VDG
Sbjct: 62 --------VFEDDS-------EFLP-------------EIRTQVFLALEEASLALFVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
G+T D IA WLR + I+AVNKCES G+ SEFW LG P P+SAI G
Sbjct: 94 NQGVTDGDLSIAKWLRNSACK--TIVAVNKCESTSLGVSLASEFWKLGLGEPYPVSAIHG 151
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
+GTG+LLDLV K ED +E++I ++I+GRPNVGKSS+LNA+ GE R IVS
Sbjct: 152 SGTGDLLDLVIDGFPKDLNVED---KEDKI-MMSIIGRPNVGKSSLLNAICGEKRAIVSD 207
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
ISGTT D+IDT + ++++DTAGIR++ + TE +NRAF++I RSDV
Sbjct: 208 ISGTTTDSIDT-LIKKDSHLWKIVDTAGIRRKKNVKYG---TEFFGINRAFKSIDRSDVC 263
Query: 462 ALVIEAMACITEQDCRIAERIEQEGKGCLIVVNKWDTIPNKNQQTATYYEQDVREKLRAL 521
LVI+A+ +T+QD ++A RIE++G+ C+IVVNKWD + KN T E+++R KL L
Sbjct: 264 VLVIDAIDGVTDQDQKLAGRIEEQGRACVIVVNKWDLV-EKNNSTIYQVEKELRSKLYFL 322
Query: 522 DWAPIVYSTAIAGQSVDKIIVAAEMVDKERSRRLSTATINQVVQEAVAFKSPPRTRGGRR 581
W+ +++ +A+ GQ V I A + RR++T+ +N+V++EA+ +KSPP R G++
Sbjct: 323 HWSKMIFISALTGQRVQNIFEHALSAVTQHRRRVTTSVVNEVLKEALGWKSPPTKRSGKQ 382
Query: 582 GRVYYCTQLLLGIFVRSAFRYGALGPLHIKYDLLQAAVRPPTFVFFVNDAKLFPETYRRY 641
GR+YY TQ+ +PPTF FVND KLF TYRRY
Sbjct: 383 GRLYYGTQV---------------------------KNQPPTFTLFVNDPKLFGITYRRY 415
Query: 642 MEKQLRADAGFSGTPIRLLWRSRRKMEMKEGKSASRTQANLVPRD 686
+EKQ+R + GF G+PI LLWR +++ +++ K S+ N++ +D
Sbjct: 416 IEKQIRLNLGFEGSPIILLWRGKQQRDLE--KETSKKNINIIQKD 458
>sp|A3PBA9|DER_PROM0 GTPase Der OS=Prochlorococcus marinus (strain MIT 9301) GN=der PE=3
SV=1
Length = 457
Score = 401 bits (1030), Expect = e-110, Method: Compositional matrix adjust.
Identities = 222/526 (42%), Positives = 313/526 (59%), Gaps = 71/526 (13%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+LP +AI+GRPNVGKS L NRL N AIV D+PGVTRDR Y + WG EF +VDTGG+
Sbjct: 2 ILPTIAIIGRPNVGKSTLVNRLCQSNDAIVFDKPGVTRDRTYQNASWGGKEFQIVDTGGL 61
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+ +D + E +P I Q A+EE+ + + +VD
Sbjct: 62 ---------VFDDDS-------EFLP-------------EIRTQVFLALEEASLALLVVD 92
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G G+T D IA WLR + I+AVNKCES GI SEFW LG P P+SAI
Sbjct: 93 GNQGVTDGDLSIAKWLRNSSCKT--IVAVNKCESTTLGISLASEFWKLGLGEPNPVSAIH 150
Query: 341 GTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
G+GTG+LLDLV EL E+ ++++ ++I+GRPNVGKSS+LN++ GE R IVS
Sbjct: 151 GSGTGDLLDLVIGEL-----PENNIQDDEEKIMMSIIGRPNVGKSSLLNSICGEKRAIVS 205
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
ISGTT D+IDT + +++IDTAGIR++ + TE +NRAF++I RSDV
Sbjct: 206 DISGTTTDSIDTLIKKGDNH-WKIIDTAGIRRKKNVKYG---TEFFGINRAFKSIDRSDV 261
Query: 461 VALVIEAMACITEQDCRIAERIEQEGKGCLIVVNKWDTIPNKNQQTATYYEQDVREKLRA 520
LVI+A+ +T+QD ++A RIE++G+ C+IVVNKWD + KN T E+++R KL
Sbjct: 262 CVLVIDAIDGVTDQDQKLAGRIEEQGRACIIVVNKWDLVE-KNSSTIYQVEKELRSKLYF 320
Query: 521 LDWAPIVYSTAIAGQSVDKIIVAAEMVDKERSRRLSTATINQVVQEAVAFKSPPRTRGGR 580
L W+ +++ +A+ GQ VD I A + RR++T+ +N+V++E++++KSPP R G+
Sbjct: 321 LHWSKMIFISALTGQRVDNIFEHALNAVNQHRRRVTTSVVNEVLKESISWKSPPTKRSGK 380
Query: 581 RGRVYYCTQLLLGIFVRSAFRYGALGPLHIKYDLLQAAVRPPTFVFFVNDAKLFPETYRR 640
+GR+YY TQ+ +PPTF FVND KLF TYRR
Sbjct: 381 QGRLYYGTQV---------------------------KNKPPTFTLFVNDPKLFGITYRR 413
Query: 641 YMEKQLRADAGFSGTPIRLLWRSRRKMEMKEGKSASRTQANLVPRD 686
Y+EKQ+R + GF GTP+ LLWR +++ + K R L+ +D
Sbjct: 414 YIEKQIRVNLGFEGTPLILLWRGKQQRALN--KEVERENIELIQKD 457
>sp|A8G3A3|DER_PROM2 GTPase Der OS=Prochlorococcus marinus (strain MIT 9215) GN=der PE=3
SV=1
Length = 457
Score = 398 bits (1022), Expect = e-109, Method: Compositional matrix adjust.
Identities = 222/526 (42%), Positives = 315/526 (59%), Gaps = 71/526 (13%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+LP +AI+GRPNVGKS L NRL N AIV D+PGVTRDR Y + WG EF +VDTGG+
Sbjct: 2 ILPTIAIIGRPNVGKSTLVNRLCQSNDAIVFDKPGVTRDRTYQNASWGGKEFQIVDTGGL 61
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+ +D + E +P I Q A+EE+ + + +VD
Sbjct: 62 ---------VFDDDS-------EFLP-------------EIRTQVFLALEEASLALLVVD 92
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G G+T D IA WLR + I+AVNKCES GI SEFW LG P P+SAI
Sbjct: 93 GNQGVTDGDLSIAKWLRNSSCKT--IVAVNKCESTTLGISLASEFWKLGLGEPNPVSAIH 150
Query: 341 GTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
G+GTG+LLDLV EL + ++ ++E +I ++I+GRPNVGKSS+LN++ GE R IVS
Sbjct: 151 GSGTGDLLDLVIGELPE----NNIRDDEEKI-MMSIIGRPNVGKSSLLNSICGEKRAIVS 205
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
ISGTT D+IDT + +++IDTAGIR++ + TE +NRAF++I RSDV
Sbjct: 206 DISGTTTDSIDTLIKKGD-NYWKIIDTAGIRRKKNVKYG---TEFFGINRAFKSIDRSDV 261
Query: 461 VALVIEAMACITEQDCRIAERIEQEGKGCLIVVNKWDTIPNKNQQTATYYEQDVREKLRA 520
LVI+A+ +T+QD ++A RIE++G+ C+IVVNKWD + KN T E+++R KL
Sbjct: 262 CVLVIDAVDGVTDQDQKLAGRIEEQGRACIIVVNKWDLVE-KNSSTIYQVEKELRSKLYF 320
Query: 521 LDWAPIVYSTAIAGQSVDKIIVAAEMVDKERSRRLSTATINQVVQEAVAFKSPPRTRGGR 580
L W+ +++ +A+ GQ VD I A + RR++T+ +N+V++E++++KSPP R G+
Sbjct: 321 LHWSKMIFISALTGQRVDNIFEHALNAVNQHRRRVTTSVVNEVLKESISWKSPPTKRSGK 380
Query: 581 RGRVYYCTQLLLGIFVRSAFRYGALGPLHIKYDLLQAAVRPPTFVFFVNDAKLFPETYRR 640
+GR+YY TQ+ +PPTF FVND KLF TYRR
Sbjct: 381 QGRLYYGTQV---------------------------KNKPPTFTLFVNDPKLFGITYRR 413
Query: 641 YMEKQLRADAGFSGTPIRLLWRSRRKMEMKEGKSASRTQANLVPRD 686
Y+EKQ+R + GF GTP+ LLWR +++ + K R ++ +D
Sbjct: 414 YIEKQIRLNLGFEGTPLILLWRGKQQRALN--KEVERENIEVIQKD 457
>sp|Q7NGF9|DER_GLOVI GTPase Der OS=Gloeobacter violaceus (strain PCC 7421) GN=der PE=3
SV=1
Length = 455
Score = 376 bits (965), Expect = e-103, Method: Compositional matrix adjust.
Identities = 215/511 (42%), Positives = 307/511 (60%), Gaps = 74/511 (14%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAI+GRPNVGKS L NRL GG+ AIV D+PGVTRDR+Y + W + F +VDTGG+
Sbjct: 3 LPIVAIIGRPNVGKSTLLNRLAGGSEAIVYDQPGVTRDRLYLPAEWCGYRFEVVDTGGL- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ ED + +PL I Q A+ E+ ++F+VDG
Sbjct: 62 --------VFEDSEVF-------LPL-------------IREQVEIALAEAAAVLFVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
Q G+T D E+ADWLR +++ NK E P + +EF++LG P +SAI G
Sbjct: 94 QQGITGGDREVADWLRGR--KPPVLIVANKLEEPSTALSLAAEFYALGLGEPYAVSAIHG 151
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPA--IAIVGRPNVGKSSILNALVGED--RT 397
+GTG+LLD + + L K + EE +P ++IVGRPNVGKSS+LNALVG + R+
Sbjct: 152 SGTGDLLDALVAVLPKDQ------PEEQELPELRVSIVGRPNVGKSSLLNALVGGEHPRS 205
Query: 398 IVSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRR 457
+VS ++GTTRDAIDT E +++RLIDTAGIR+++ + EA V RA RAIRR
Sbjct: 206 MVSEVAGTTRDAIDTLVEHGE-RRYRLIDTAGIRRKSRVDYG---PEAFGVTRAIRAIRR 261
Query: 458 SDVVALVIEAMACITEQDCRIAERIEQEGKGCLIVVNKWDTIPNKNQQTATYYEQDVREK 517
+DVV LV++A I +Q+ +A +I G+ C++VVNKWD I K+ T +Y ++R +
Sbjct: 262 ADVVVLVVDATEGIHDQERNLAAKIASAGRACVLVVNKWDAI-EKDTYTMNHYRDEMRRE 320
Query: 518 LRALDWAPIVYSTAIAGQSVDKIIVAAEMVDKERSRRLSTATINQVVQEAVAFKSPPRTR 577
L ++WAP+V+++A+ GQ V+KI A + + RR+ST+ +N+ +Q+A+ ++SPP +R
Sbjct: 321 LDFVEWAPVVFTSALTGQRVEKIFDAIDAAAGQHQRRVSTSVLNEALQDALLWRSPPASR 380
Query: 578 GGRRGRVYYCTQLLLGIFVRSAFRYGALGPLHIKYDLLQAAVRPPTFVFFVNDAKLFPET 637
GR+G+VYY TQ+ A PPTFV FVND KLF E
Sbjct: 381 QGRQGKVYYATQI---------------------------ATNPPTFVLFVNDTKLFKEG 413
Query: 638 YRRYMEKQLRADAGFSGTPIRLLWRSRRKME 668
YRRY+E Q R GF G+P+R ++R + + E
Sbjct: 414 YRRYLEGQFRGSLGFEGSPVRFIFRGKPERE 444
Score = 57.0 bits (136), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 65/143 (45%), Gaps = 10/143 (6%)
Query: 370 RIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRD--AIDTEFTGPEGQKFRLIDT 427
++P +AI+GRPNVGKS++LN L G IV G TRD + E+ G +F ++DT
Sbjct: 2 QLPIVAIIGRPNVGKSTLLNRLAGGSEAIVYDQPGVTRDRLYLPAEWC---GYRFEVVDT 58
Query: 428 AGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALVIEAMACITEQDCRIAERIEQEGK 487
G+ + L + A+ + V V++ IT D +A+ +
Sbjct: 59 GGL-----VFEDSEVFLPLIREQVEIALAEAAAVLFVVDGQQGITGGDREVADWLRGRKP 113
Query: 488 GCLIVVNKWDTIPNKNQQTATYY 510
LIV NK + A +Y
Sbjct: 114 PVLIVANKLEEPSTALSLAAEFY 136
>sp|A4IQA2|DER_GEOTN GTPase Der OS=Geobacillus thermodenitrificans (strain NG80-2)
GN=der PE=3 SV=1
Length = 436
Score = 366 bits (940), Expect = e-100, Method: Compositional matrix adjust.
Identities = 214/503 (42%), Positives = 299/503 (59%), Gaps = 71/503 (14%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+VG +IV D PGVTRDR+Y + W H F L+DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTIFNRIVGERISIVEDVPGVTRDRIYSSAEWLNHSFYLIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
IG E PL + I +QA AI+E+ VIIF+ +G+
Sbjct: 62 ----------------DIGDE--PLLVQ----------IRQQAEIAIDEADVIIFMTNGR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+TAADEE+A LR++ +K ++LAVNK ++P + + +F++LGF P PIS GT
Sbjct: 94 DGVTAADEEVAKLLRRS--NKPVVLAVNKIDNPEMRDL-IYDFYALGFGEPYPISGAHGT 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD V K G E E + ++GRPNVGKSS++NA++GE+R IVS I
Sbjct: 151 GLGDLLDAVARHFPKDHGQE----YEEDVIKFCLIGRPNVGKSSLVNAILGEERVIVSDI 206
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDA+DT F EGQK+ +IDTAG+RKR I S TE SV RA RAI RSDVV
Sbjct: 207 AGTTRDAVDTSFV-REGQKYVIIDTAGMRKRGKIYES---TEKYSVLRALRAIERSDVVL 262
Query: 463 LVIEAMACITEQDCRIAERIEQEGKGCLIVVNKWDTIPNKNQQTATYYEQDVREKLRALD 522
+V+ A I EQD +IA + G+G ++VVNKWD + K+ +T +E+ +R+ LD
Sbjct: 263 VVLNAEEGIIEQDKKIAGYAHEAGRGVILVVNKWDAV-EKDDKTMVEFERKIRDHFPFLD 321
Query: 523 WAPIVYSTAIAGQSVDKIIVAAEMVDKERSRRLSTATINQVVQEAVAFKSPPRTRGGRRG 582
+API++ +A Q + K++ ++V + R+ T +N+V+ +AVA P T GRR
Sbjct: 322 YAPILFVSAKTKQRLHKLLPLVQLVSDNHAMRVQTNVLNEVIMDAVAMNPTP-THNGRRL 380
Query: 583 RVYYCTQLLLGIFVRSAFRYGALGPLHIKYDLLQAAVRPPTFVFFVNDAKLFPETYRRYM 642
++YY TQ+ AV+PPTFV FVND +L +Y R++
Sbjct: 381 KIYYMTQV---------------------------AVKPPTFVAFVNDPELMHFSYERFL 413
Query: 643 EKQLRADAGFSGTPIRLLWRSRR 665
E ++R GF GTPI+++ R R+
Sbjct: 414 ENRIRDAFGFEGTPIKIIARPRK 436
>sp|Q5KXT0|DER_GEOKA GTPase Der OS=Geobacillus kaustophilus (strain HTA426) GN=der PE=3
SV=1
Length = 436
Score = 365 bits (936), Expect = e-100, Method: Compositional matrix adjust.
Identities = 215/503 (42%), Positives = 299/503 (59%), Gaps = 71/503 (14%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+VG +IV D PGVTRDR+Y R+ W H F L+DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTIFNRIVGERISIVEDVPGVTRDRIYSRAEWLNHSFYLIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
IG E PL + I +QA AI+E+ VIIF+ +G+
Sbjct: 62 ----------------DIGDE--PLLVQ----------IRQQAEIAIDEADVIIFMTNGR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+TAADEE+A LR++ +K ++LAVNK ++P + + +F++LGF P PIS GT
Sbjct: 94 DGVTAADEEVAKLLRRS--NKPVVLAVNKIDNPEMRDL-IYDFYALGFGEPYPISGAHGT 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD V K G E E + ++GRPNVGKSS++NA++GE+R IVS I
Sbjct: 151 GLGDLLDAVVRHFPKGGGQE----YEEDVIKFCLIGRPNVGKSSLVNAILGEERVIVSDI 206
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDA+DT F EGQ++ +IDTAG+RKR I S TE SV RA RAI RSDVV
Sbjct: 207 AGTTRDAVDTSFV-REGQEYVIIDTAGMRKRGKIYES---TEKYSVLRALRAIERSDVVL 262
Query: 463 LVIEAMACITEQDCRIAERIEQEGKGCLIVVNKWDTIPNKNQQTATYYEQDVREKLRALD 522
+V+ A I EQD +IA + G+G +++VNKWD I K+ +T +E+ +R+ LD
Sbjct: 263 VVLNAEEGIIEQDKKIAGYAHEAGRGVILIVNKWDAI-EKDDKTMVEFERKIRDHFPFLD 321
Query: 523 WAPIVYSTAIAGQSVDKIIVAAEMVDKERSRRLSTATINQVVQEAVAFKSPPRTRGGRRG 582
+API++ +A Q + K++ +V + R+ T +N+V+ +AVA P T GRR
Sbjct: 322 YAPILFVSAKTKQRLHKLLPLVRLVSDNHAMRVQTNVLNEVIMDAVAMNPTP-THNGRRL 380
Query: 583 RVYYCTQLLLGIFVRSAFRYGALGPLHIKYDLLQAAVRPPTFVFFVNDAKLFPETYRRYM 642
+VYY TQ+ AV+PPTFV FVND +L +Y R++
Sbjct: 381 KVYYMTQV---------------------------AVKPPTFVAFVNDPELMHFSYERFL 413
Query: 643 EKQLRADAGFSGTPIRLLWRSRR 665
E ++R GF GTPI+++ R R+
Sbjct: 414 ENRIRDAFGFEGTPIKIIARPRK 436
>sp|C5D3F4|DER_GEOSW GTPase Der OS=Geobacillus sp. (strain WCH70) GN=der PE=3 SV=1
Length = 436
Score = 365 bits (936), Expect = e-100, Method: Compositional matrix adjust.
Identities = 216/503 (42%), Positives = 301/503 (59%), Gaps = 71/503 (14%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+VG +IV D PGVTRDR+Y + W H+F L+DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTIFNRIVGERISIVEDVPGVTRDRIYSSAEWLNHKFYLIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
IG E PL + I +QA AI+E+ VIIF+V+G+
Sbjct: 62 ----------------DIGDE--PLLVQ----------IRQQAEIAIDEADVIIFMVNGR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+TAADEE+A L ++ +K ++LAVNK ++P + + +F++LGF P PIS GT
Sbjct: 94 DGVTAADEEVAKILHRS--NKPVVLAVNKIDNPEMRDL-IYDFYALGFGDPYPISGSHGT 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD V K G E E E + ++GRPNVGKSS++NA++GE+R IVS I
Sbjct: 151 GLGDLLDAVARHFPK-RGQE---EYEEDVIKFCLIGRPNVGKSSLVNAILGEERVIVSDI 206
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDA+DT F EGQ++ +IDTAG+RKR I S TE SV RA +AI RSDVV
Sbjct: 207 AGTTRDAVDTTFV-REGQEYVIIDTAGMRKRGKIYES---TEKYSVLRALKAIERSDVVL 262
Query: 463 LVIEAMACITEQDCRIAERIEQEGKGCLIVVNKWDTIPNKNQQTATYYEQDVREKLRALD 522
+V+ A I EQD +IA + G+G +IVVNKWD I K+ +T +E+ +R+ LD
Sbjct: 263 VVLNAEEGIIEQDKKIAGYAHEAGRGVIIVVNKWDAI-EKDDKTLIEFERKIRDHFPFLD 321
Query: 523 WAPIVYSTAIAGQSVDKIIVAAEMVDKERSRRLSTATINQVVQEAVAFKSPPRTRGGRRG 582
+API++ +A Q + K++ MV + + R+ T +N+V+ +AVA P T GRR
Sbjct: 322 YAPIIFVSAKTKQRLHKLLPLVRMVSENHAMRVQTNVLNEVIMDAVAMNPTP-THNGRRL 380
Query: 583 RVYYCTQLLLGIFVRSAFRYGALGPLHIKYDLLQAAVRPPTFVFFVNDAKLFPETYRRYM 642
++YY TQ+ AV+PPTFV FVND +L +Y R++
Sbjct: 381 KIYYMTQV---------------------------AVKPPTFVVFVNDPELMHFSYERFL 413
Query: 643 EKQLRADAGFSGTPIRLLWRSRR 665
E ++R GF GTPI+++ R R+
Sbjct: 414 ENRIRDAFGFEGTPIKIIARPRK 436
>sp|Q030L6|DER_LACLS GTPase Der OS=Lactococcus lactis subsp. cremoris (strain SK11)
GN=der PE=3 SV=1
Length = 436
Score = 360 bits (923), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 211/505 (41%), Positives = 294/505 (58%), Gaps = 73/505 (14%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKS +FNR+ G +IV D PGVTRDR+Y W +F ++DTGG
Sbjct: 3 LPTVAIVGRPNVGKSTIFNRIAGERISIVEDIPGVTRDRIYATGEWLTRKFNIIDTGG-- 60
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
I + P T I QA A+ E+ VII +VDG
Sbjct: 61 ------------------IELSDEPFMTE----------IRAQAEIAMTEADVIIAVVDG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A+ L + DK +IL VNK ++P + M++ +F+SLG P P+SA+ G
Sbjct: 93 ETGITDADEAVANILYRT--DKPVILIVNKVDNPERR-MEIFDFYSLGLGDPYPVSAVHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENR-IPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
GTG++LD + L + +EEEN + +++GRPNVGKSS++NA++GEDR I S
Sbjct: 150 IGTGDVLDAIVQNLP------NEIEEENEDVIKFSLIGRPNVGKSSLINAILGEDRVIAS 203
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
PI+GTTRDAIDT F E Q+F +IDTAG+RK I + TE SV RA RAI RSD+
Sbjct: 204 PIAGTTRDAIDTHFVDSEDQEFVMIDTAGMRKSGKIYEN---TEKYSVMRAMRAIDRSDI 260
Query: 461 VALVIEAMACITEQDCRIAERIEQEGKGCLIVVNKWDTIPNKNQQTATYYEQDVREKLRA 520
V +VI A I E D RIA + GKG LIVVNKWDT+ K+ T +E ++R K +
Sbjct: 261 VLMVINAEEGIREYDMRIAGFAHEAGKGILIVVNKWDTL-EKDNDTMKKFELEIRTKFKF 319
Query: 521 LDWAPIVYSTAIAGQSVDKIIVAAEMVDKERSRRLSTATINQVVQEAVAFKSPPRTRGGR 580
LD+APIVY +A GQ ++K+ + + ++ R+S++ +N V+ +AVA P T G+
Sbjct: 320 LDYAPIVYVSAKTGQRLNKLPDMIKEIHHAQNLRISSSVLNDVIMDAVAINPTP-TDKGK 378
Query: 581 RGRVYYCTQLLLGIFVRSAFRYGALGPLHIKYDLLQAAVRPPTFVFFVNDAKLFPETYRR 640
R +++Y TQ+ A++PPTFV FVN+ +L +Y R
Sbjct: 379 RLKIFYATQV---------------------------AIKPPTFVVFVNEEELMHFSYLR 411
Query: 641 YMEKQLRADAGFSGTPIRLLWRSRR 665
++E Q+R F GTPI L+ R R+
Sbjct: 412 FLENQIRKAFVFEGTPIHLIARKRK 436
>sp|A2RM49|DER_LACLM GTPase Der OS=Lactococcus lactis subsp. cremoris (strain MG1363)
GN=der PE=3 SV=1
Length = 436
Score = 360 bits (923), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 211/505 (41%), Positives = 294/505 (58%), Gaps = 73/505 (14%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKS +FNR+ G +IV D PGVTRDR+Y W +F ++DTGG
Sbjct: 3 LPTVAIVGRPNVGKSTIFNRIAGERISIVEDIPGVTRDRIYATGEWLTRKFNIIDTGG-- 60
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
I + P T I QA A+ E+ VII +VDG
Sbjct: 61 ------------------IELSDEPFMTE----------IRAQAEIAMTEADVIIAVVDG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A+ L + DK +IL VNK ++P + M++ +F+SLG P P+SA+ G
Sbjct: 93 ETGITDADEAVANILYRT--DKPVILIVNKVDNPERR-MEIFDFYSLGLGDPYPVSAVHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENR-IPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
GTG++LD + L + +EEEN + +++GRPNVGKSS++NA++GEDR I S
Sbjct: 150 IGTGDVLDAIVQNLP------NEIEEENEDVIKFSLIGRPNVGKSSLINAILGEDRVIAS 203
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
PI+GTTRDAIDT F E Q+F +IDTAG+RK I + TE SV RA RAI RSD+
Sbjct: 204 PIAGTTRDAIDTHFVDSEDQEFVMIDTAGMRKSGKIYEN---TEKYSVMRAMRAIDRSDI 260
Query: 461 VALVIEAMACITEQDCRIAERIEQEGKGCLIVVNKWDTIPNKNQQTATYYEQDVREKLRA 520
V +VI A I E D RIA + GKG LIVVNKWDT+ K+ T +E ++R K +
Sbjct: 261 VLMVINAEEGIREYDMRIAGFAHEAGKGILIVVNKWDTL-EKDNDTMKKFELEIRTKFKF 319
Query: 521 LDWAPIVYSTAIAGQSVDKIIVAAEMVDKERSRRLSTATINQVVQEAVAFKSPPRTRGGR 580
LD+APIVY +A GQ ++K+ + + ++ R+S++ +N V+ +AVA P T G+
Sbjct: 320 LDYAPIVYVSAKTGQRLNKLPDMIKEIHHAQNLRISSSVLNDVIMDAVAINPTP-TDKGK 378
Query: 581 RGRVYYCTQLLLGIFVRSAFRYGALGPLHIKYDLLQAAVRPPTFVFFVNDAKLFPETYRR 640
R +++Y TQ+ A++PPTFV FVN+ +L +Y R
Sbjct: 379 RLKIFYATQV---------------------------AIKPPTFVVFVNEEELMHFSYLR 411
Query: 641 YMEKQLRADAGFSGTPIRLLWRSRR 665
++E Q+R F GTPI L+ R R+
Sbjct: 412 FLENQIRKAFVFEGTPIHLIARKRK 436
>sp|Q24VA2|DER_DESHY GTPase Der OS=Desulfitobacterium hafniense (strain Y51) GN=der PE=3
SV=1
Length = 441
Score = 358 bits (920), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 214/503 (42%), Positives = 301/503 (59%), Gaps = 72/503 (14%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFNRL GG AIV + PGVTRDR+Y S W +F ++DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTLFNRLAGGLVAIVENRPGVTRDRLYRDSEWLGRKFTIIDTGGIEF 63
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
V+++ P + + + RQA AIEE+ VI+F++D Q
Sbjct: 64 VNENTP----------------------------ITAQMRRQAEIAIEEADVIVFVIDAQ 95
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
T D+ IA LR++ K +ILA NK E+ K ++ EF++LG P+PISA+ G
Sbjct: 96 ISPTPDDDMIAQTLRRS--GKPVILAANKVENFAK--TELYEFYNLGLGEPVPISAVHGM 151
Query: 343 GTGELLDLVCSELKKVEGTEDLVEE-ENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
G+LLD V S ED+ EE + IA+VGRPNVGKSS++N L+GE+R IVS
Sbjct: 152 NIGDLLDEVVSHFP-----EDIEEEVDPDTIRIAVVGRPNVGKSSLVNTLLGEERVIVSN 206
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
I GTTRDAID+ F EG+ + +IDTAG+R++ I TE SV+R+ RA+ RSDV+
Sbjct: 207 IPGTTRDAIDSAFEH-EGKHYIIIDTAGMRRKGRIE---ELTEQYSVSRSLRAVDRSDVI 262
Query: 462 ALVIEAMACITEQDCRIAERIEQEGKGCLIVVNKWDTIPNKNQQTATYYEQDVREKLRAL 521
++++A +TEQD +IA + GKG ++VVNKWD I K+ +T +E+D+RE+L +
Sbjct: 263 LMLLDAGEGVTEQDKKIAGYAHEAGKGIVLVVNKWDLI-EKDDKTMNRFEKDIREELGFM 321
Query: 522 DWAPIVYSTAIAGQSVDKIIVAAEMVDKERSRRLSTATINQVVQEAVAFKSPPRTRGGRR 581
+AP ++ +A GQ V K++ + V ++ S R++TAT+N +V+E V PP T GRR
Sbjct: 322 QYAPTLFISAKTGQRVTKLLDLVDFVAEQNSTRVATATLNTLVREWVHLNPPP-TDKGRR 380
Query: 582 GRVYYCTQLLLGIFVRSAFRYGALGPLHIKYDLLQAAVRPPTFVFFVNDAKLFPETYRRY 641
+V Y TQ+ V+PPTFVFFVND +L +YRRY
Sbjct: 381 LKVLYATQV---------------------------GVKPPTFVFFVNDHELMHFSYRRY 413
Query: 642 MEKQLRADAGFSGTPIRLLWRSR 664
+E QLR+ GF G+PIR++ R +
Sbjct: 414 LENQLRSSFGFEGSPIRMIVRQK 436
>sp|Q1WTQ4|DER_LACS1 GTPase Der OS=Lactobacillus salivarius (strain UCC118) GN=der PE=3
SV=1
Length = 436
Score = 357 bits (916), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 211/503 (41%), Positives = 292/503 (58%), Gaps = 71/503 (14%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNRL G +IV D PGVTRDR+Y R+ W H F L+DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTIFNRLAGERISIVEDTPGVTRDRIYARTEWLGHPFNLIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
IG E P T+ I QA AIEE+ VIIF+V +
Sbjct: 62 ----------------DIGDE--PFLTQ----------ITEQAEIAIEEADVIIFVVSVK 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+T ADE++A L + DK ++LAVNK ++P + +F+SLGF P+P++ G
Sbjct: 94 EGVTDADEKVARILYRT--DKPVVLAVNKVDNPELR-ADIYDFYSLGFGEPIPVAGTHGI 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
GTG+LLD + E K D EE+ + +GRPNVGKSS++NA++GE+R IVS I
Sbjct: 151 GTGDLLDKIIKEFPK-----DATNEEDDSIKFSFIGRPNVGKSSLVNAILGENRVIVSNI 205
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
GTTRDAIDT F +G K+ +IDTAGIRK+ + + TE SV RA RAI RSDVV
Sbjct: 206 EGTTRDAIDTRFETEDGTKYTMIDTAGIRKKGKVYEN---TEKYSVLRAMRAIDRSDVVC 262
Query: 463 LVIEAMACITEQDCRIAERIEQEGKGCLIVVNKWDTIPNKNQQTATYYEQDVREKLRALD 522
+V+ A I EQD +A + G+ +IVVNKWDT+ K+ +T + +E +R++ + L
Sbjct: 263 VVLNAEEGIREQDKHVAGYAHEAGRAIVIVVNKWDTL-KKDNKTMSDFENLIRQEFQYLS 321
Query: 523 WAPIVYSTAIAGQSVDKIIVAAEMVDKERSRRLSTATINQVVQEAVAFKSPPRTRGGRRG 582
+APIV+ +A Q +DK+ + V+ +R+S+A +N VV +A+A P T G+R
Sbjct: 322 YAPIVFVSAKTKQRLDKLPELIKRVNDNHEQRISSAVLNDVVMDAIAHNPTP-TDNGKRL 380
Query: 583 RVYYCTQLLLGIFVRSAFRYGALGPLHIKYDLLQAAVRPPTFVFFVNDAKLFPETYRRYM 642
R+YY TQ+ A++PPTFV FVND +L +Y R++
Sbjct: 381 RIYYATQV---------------------------AIKPPTFVIFVNDPELMHFSYERFL 413
Query: 643 EKQLRADAGFSGTPIRLLWRSRR 665
E Q+R F GTPI ++ R R+
Sbjct: 414 ENQIREAFDFEGTPIHIIERRRK 436
>sp|Q03MB1|DER_STRTD GTPase Der OS=Streptococcus thermophilus (strain ATCC BAA-491 /
LMD-9) GN=der PE=3 SV=1
Length = 436
Score = 357 bits (915), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 211/505 (41%), Positives = 296/505 (58%), Gaps = 73/505 (14%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y + W +F L+DTGG+
Sbjct: 3 LPTVAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYTSAEWLNRQFSLIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+ E+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAGIAMTEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L K +K +ILAVNK ++P + +F+SLG P P+S++ G
Sbjct: 93 KEGVTDADEYVARILYKT--NKPVILAVNKVDNPEMR-ADIYDFYSLGLGDPYPVSSVHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEEN-RIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
GTG++LD + L TE VEEEN I +++GRPNVGKSS++NA++GEDR I S
Sbjct: 150 IGTGDVLDAIVENLP----TE--VEEENPDIIRFSLIGRPNVGKSSLINAILGEDRVIAS 203
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
PI+GTTRDAIDT F EGQ++ +IDTAG+RK + + TE SV R+ RAI RSDV
Sbjct: 204 PIAGTTRDAIDTNFVDSEGQEYTMIDTAGMRKSGKVYEN---TEKYSVMRSMRAIDRSDV 260
Query: 461 VALVIEAMACITEQDCRIAERIEQEGKGCLIVVNKWDTIPNKNQQTATYYEQDVREKLRA 520
V +VI A I E D RIA + GKG +IVVNKWDTI K+ T +E D+R++ +
Sbjct: 261 VLMVINAEEGIREYDKRIAGFAHEAGKGIIIVVNKWDTI-KKDNHTVANWEADIRDQFQF 319
Query: 521 LDWAPIVYSTAIAGQSVDKIIVAAEMVDKERSRRLSTATINQVVQEAVAFKSPPRTRGGR 580
L +APIV+ +A Q ++K+ + + + ++RR+S+A +N V+ +A+A P T G+
Sbjct: 320 LSYAPIVFVSAKTKQRLNKLPEMIKRISESQNRRISSAVLNDVIMDAIAINPTP-TDKGK 378
Query: 581 RGRVYYCTQLLLGIFVRSAFRYGALGPLHIKYDLLQAAVRPPTFVFFVNDAKLFPETYRR 640
R +++Y TQ+ +V+PPTFV FVN+ +L +Y R
Sbjct: 379 RLKIFYGTQV---------------------------SVKPPTFVIFVNEEELMHFSYMR 411
Query: 641 YMEKQLRADAGFSGTPIRLLWRSRR 665
++E Q+R GF GTPI L+ R R+
Sbjct: 412 FLENQIRQAFGFEGTPIHLIARKRK 436
>sp|B5XJW0|DER_STRPZ GTPase Der OS=Streptococcus pyogenes serotype M49 (strain NZ131)
GN=der PE=3 SV=1
Length = 436
Score = 356 bits (914), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 204/505 (40%), Positives = 295/505 (58%), Gaps = 71/505 (14%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+LP VAIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W +F L+DTGG+
Sbjct: 2 VLPTVAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATGEWLNRQFSLIDTGGI 61
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+V A I+ QA A+EE+ VI+F+V
Sbjct: 62 DDVD------------------------------APFMEQIKHQAQIAMEEADVIVFVVS 91
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G+ G+T ADE ++ L + + +ILAVNK ++P + +F+SLG P P+S++
Sbjct: 92 GKEGVTDADEYVSKILYRT--NTPVILAVNKVDNPEMR-NDIYDFYSLGLGDPYPVSSVH 148
Query: 341 GTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
G GTG++LD + L E EE + I +++GRPNVGKSS++NA++GEDR I S
Sbjct: 149 GIGTGDVLDAIVENLPVEEA-----EENDDIIRFSLIGRPNVGKSSLINAILGEDRVIAS 203
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
P++GTTRDAIDT FT +GQ+F +IDTAG+RK I + TE SV RA RAI RSDV
Sbjct: 204 PVAGTTRDAIDTHFTDADGQEFTMIDTAGMRKSGKIYEN---TEKYSVMRAMRAIDRSDV 260
Query: 461 VALVIEAMACITEQDCRIAERIEQEGKGCLIVVNKWDTIPNKNQQTATYYEQDVREKLRA 520
V +VI A I E D RIA + GKG +IVVNKWDTI +K+ T +E D+R++ +
Sbjct: 261 VLMVINAEEGIREYDKRIAGFAHEAGKGMIIVVNKWDTI-DKDNHTVAKWEADIRDQFQF 319
Query: 521 LDWAPIVYSTAIAGQSVDKIIVAAEMVDKERSRRLSTATINQVVQEAVAFKSPPRTRGGR 580
L +API++ +A+ Q ++K+ + + + +++R+ +A +N V+ +A+A P T G+
Sbjct: 320 LTYAPIIFVSALTKQRLNKLPDLIKRISESQNKRIPSAVLNDVIMDAIAINPTP-TDKGK 378
Query: 581 RGRVYYCTQLLLGIFVRSAFRYGALGPLHIKYDLLQAAVRPPTFVFFVNDAKLFPETYRR 640
R +++Y TQ+ +V+PPTFV FVN+ +L +Y R
Sbjct: 379 RLKIFYATQV---------------------------SVKPPTFVVFVNEEELMHFSYLR 411
Query: 641 YMEKQLRADAGFSGTPIRLLWRSRR 665
++E Q+RA F GTPI L+ R R+
Sbjct: 412 FLENQIRAAFTFEGTPIHLIARKRK 436
>sp|Q1JNC4|DER_STRPC GTPase Der OS=Streptococcus pyogenes serotype M12 (strain MGAS9429)
GN=der PE=3 SV=1
Length = 436
Score = 356 bits (914), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 204/505 (40%), Positives = 295/505 (58%), Gaps = 71/505 (14%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+LP VAIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W +F L+DTGG+
Sbjct: 2 VLPTVAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATGEWLNRQFSLIDTGGI 61
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+V A I+ QA A+EE+ VI+F+V
Sbjct: 62 DDVD------------------------------APFMEQIKHQAQIAMEEADVIVFVVS 91
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G+ G+T ADE ++ L + + +ILAVNK ++P + +F+SLG P P+S++
Sbjct: 92 GKEGVTDADEYVSKILYRT--NTPVILAVNKVDNPEMR-NDIYDFYSLGLGDPYPVSSVH 148
Query: 341 GTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
G GTG++LD + L E EE + I +++GRPNVGKSS++NA++GEDR I S
Sbjct: 149 GIGTGDVLDAIVENLPVEEA-----EENDDIIRFSLIGRPNVGKSSLINAILGEDRVIAS 203
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
P++GTTRDAIDT FT +GQ+F +IDTAG+RK I + TE SV RA RAI RSDV
Sbjct: 204 PVAGTTRDAIDTHFTDADGQEFTMIDTAGMRKSGKIYEN---TEKYSVMRAMRAIDRSDV 260
Query: 461 VALVIEAMACITEQDCRIAERIEQEGKGCLIVVNKWDTIPNKNQQTATYYEQDVREKLRA 520
V +VI A I E D RIA + GKG +IVVNKWDTI +K+ T +E D+R++ +
Sbjct: 261 VLMVINAEEGIREYDKRIAGFAHEAGKGMIIVVNKWDTI-DKDNHTVAKWEADIRDQFQF 319
Query: 521 LDWAPIVYSTAIAGQSVDKIIVAAEMVDKERSRRLSTATINQVVQEAVAFKSPPRTRGGR 580
L +API++ +A+ Q ++K+ + + + +++R+ +A +N V+ +A+A P T G+
Sbjct: 320 LTYAPIIFVSALTKQRLNKLPDLIKRISESQNKRIPSAVLNDVIMDAIAINPTP-TDKGK 378
Query: 581 RGRVYYCTQLLLGIFVRSAFRYGALGPLHIKYDLLQAAVRPPTFVFFVNDAKLFPETYRR 640
R +++Y TQ+ +V+PPTFV FVN+ +L +Y R
Sbjct: 379 RLKIFYATQV---------------------------SVKPPTFVVFVNEEELMHFSYLR 411
Query: 641 YMEKQLRADAGFSGTPIRLLWRSRR 665
++E Q+RA F GTPI L+ R R+
Sbjct: 412 FLENQIRAAFTFEGTPIHLIARKRK 436
>sp|Q1JDF1|DER_STRPB GTPase Der OS=Streptococcus pyogenes serotype M12 (strain MGAS2096)
GN=der PE=3 SV=1
Length = 436
Score = 356 bits (914), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 204/505 (40%), Positives = 295/505 (58%), Gaps = 71/505 (14%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+LP VAIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W +F L+DTGG+
Sbjct: 2 VLPTVAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATGEWLNRQFSLIDTGGI 61
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+V A I+ QA A+EE+ VI+F+V
Sbjct: 62 DDVD------------------------------APFMEQIKHQAQIAMEEADVIVFVVS 91
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G+ G+T ADE ++ L + + +ILAVNK ++P + +F+SLG P P+S++
Sbjct: 92 GKEGVTDADEYVSKILYRT--NTPVILAVNKVDNPEMR-NDIYDFYSLGLGDPYPVSSVH 148
Query: 341 GTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
G GTG++LD + L E EE + I +++GRPNVGKSS++NA++GEDR I S
Sbjct: 149 GIGTGDVLDAIVENLPVEEA-----EENDDIIRFSLIGRPNVGKSSLINAILGEDRVIAS 203
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
P++GTTRDAIDT FT +GQ+F +IDTAG+RK I + TE SV RA RAI RSDV
Sbjct: 204 PVAGTTRDAIDTHFTDADGQEFTMIDTAGMRKSGKIYEN---TEKYSVMRAMRAIDRSDV 260
Query: 461 VALVIEAMACITEQDCRIAERIEQEGKGCLIVVNKWDTIPNKNQQTATYYEQDVREKLRA 520
V +VI A I E D RIA + GKG +IVVNKWDTI +K+ T +E D+R++ +
Sbjct: 261 VLMVINAEEGIREYDKRIAGFAHEAGKGMIIVVNKWDTI-DKDNHTVAKWEADIRDQFQF 319
Query: 521 LDWAPIVYSTAIAGQSVDKIIVAAEMVDKERSRRLSTATINQVVQEAVAFKSPPRTRGGR 580
L +API++ +A+ Q ++K+ + + + +++R+ +A +N V+ +A+A P T G+
Sbjct: 320 LTYAPIIFVSALTKQRLNKLPDLIKRISESQNKRIPSAVLNDVIMDAIAINPTP-TDKGK 378
Query: 581 RGRVYYCTQLLLGIFVRSAFRYGALGPLHIKYDLLQAAVRPPTFVFFVNDAKLFPETYRR 640
R +++Y TQ+ +V+PPTFV FVN+ +L +Y R
Sbjct: 379 RLKIFYATQV---------------------------SVKPPTFVVFVNEEELMHFSYLR 411
Query: 641 YMEKQLRADAGFSGTPIRLLWRSRR 665
++E Q+RA F GTPI L+ R R+
Sbjct: 412 FLENQIRAAFTFEGTPIHLIARKRK 436
>sp|P64065|DER_STRP8 GTPase Der OS=Streptococcus pyogenes serotype M18 (strain MGAS8232)
GN=der PE=3 SV=1
Length = 436
Score = 356 bits (914), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 204/505 (40%), Positives = 295/505 (58%), Gaps = 71/505 (14%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+LP VAIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W +F L+DTGG+
Sbjct: 2 VLPTVAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATGEWLNRQFSLIDTGGI 61
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+V A I+ QA A+EE+ VI+F+V
Sbjct: 62 DDVD------------------------------APFMEQIKHQAQIAMEEADVIVFVVS 91
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G+ G+T ADE ++ L + + +ILAVNK ++P + +F+SLG P P+S++
Sbjct: 92 GKEGVTDADEYVSKILYRT--NTPVILAVNKVDNPEMR-NDIYDFYSLGLGDPYPVSSVH 148
Query: 341 GTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
G GTG++LD + L E EE + I +++GRPNVGKSS++NA++GEDR I S
Sbjct: 149 GIGTGDVLDAIVENLPVEEA-----EENDDIIRFSLIGRPNVGKSSLINAILGEDRVIAS 203
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
P++GTTRDAIDT FT +GQ+F +IDTAG+RK I + TE SV RA RAI RSDV
Sbjct: 204 PVAGTTRDAIDTHFTDADGQEFTMIDTAGMRKSGKIYEN---TEKYSVMRAMRAIDRSDV 260
Query: 461 VALVIEAMACITEQDCRIAERIEQEGKGCLIVVNKWDTIPNKNQQTATYYEQDVREKLRA 520
V +VI A I E D RIA + GKG +IVVNKWDTI +K+ T +E D+R++ +
Sbjct: 261 VLMVINAEEGIREYDKRIAGFAHEAGKGMIIVVNKWDTI-DKDNHTVAKWEADIRDQFQF 319
Query: 521 LDWAPIVYSTAIAGQSVDKIIVAAEMVDKERSRRLSTATINQVVQEAVAFKSPPRTRGGR 580
L +API++ +A+ Q ++K+ + + + +++R+ +A +N V+ +A+A P T G+
Sbjct: 320 LTYAPIIFVSALTKQRLNKLPDLIKRISESQNKRIPSAVLNDVIMDAIAINPTP-TDKGK 378
Query: 581 RGRVYYCTQLLLGIFVRSAFRYGALGPLHIKYDLLQAAVRPPTFVFFVNDAKLFPETYRR 640
R +++Y TQ+ +V+PPTFV FVN+ +L +Y R
Sbjct: 379 RLKIFYATQV---------------------------SVKPPTFVVFVNEEELMHFSYLR 411
Query: 641 YMEKQLRADAGFSGTPIRLLWRSRR 665
++E Q+RA F GTPI L+ R R+
Sbjct: 412 FLENQIRAAFTFEGTPIHLIARKRK 436
>sp|Q5XDR3|DER_STRP6 GTPase Der OS=Streptococcus pyogenes serotype M6 (strain ATCC
BAA-946 / MGAS10394) GN=der PE=3 SV=1
Length = 436
Score = 356 bits (914), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 204/505 (40%), Positives = 295/505 (58%), Gaps = 71/505 (14%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+LP VAIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W +F L+DTGG+
Sbjct: 2 VLPTVAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATGEWLNRQFSLIDTGGI 61
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+V A I+ QA A+EE+ VI+F+V
Sbjct: 62 DDVD------------------------------APFMEQIKHQAQIAMEEADVIVFVVS 91
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G+ G+T ADE ++ L + + +ILAVNK ++P + +F+SLG P P+S++
Sbjct: 92 GKEGVTDADEYVSKILYRT--NTPVILAVNKVDNPEMR-NDIYDFYSLGLGDPYPVSSVH 148
Query: 341 GTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
G GTG++LD + L E EE + I +++GRPNVGKSS++NA++GEDR I S
Sbjct: 149 GIGTGDVLDAIVENLPVEEA-----EENDDIIRFSLIGRPNVGKSSLINAILGEDRVIAS 203
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
P++GTTRDAIDT FT +GQ+F +IDTAG+RK I + TE SV RA RAI RSDV
Sbjct: 204 PVAGTTRDAIDTHFTDADGQEFTMIDTAGMRKSGKIYEN---TEKYSVMRAMRAIDRSDV 260
Query: 461 VALVIEAMACITEQDCRIAERIEQEGKGCLIVVNKWDTIPNKNQQTATYYEQDVREKLRA 520
V +VI A I E D RIA + GKG +IVVNKWDTI +K+ T +E D+R++ +
Sbjct: 261 VLMVINAEEGIREYDKRIAGFAHEAGKGMIIVVNKWDTI-DKDNHTVAKWEADIRDQFQF 319
Query: 521 LDWAPIVYSTAIAGQSVDKIIVAAEMVDKERSRRLSTATINQVVQEAVAFKSPPRTRGGR 580
L +API++ +A+ Q ++K+ + + + +++R+ +A +N V+ +A+A P T G+
Sbjct: 320 LTYAPIIFVSALTKQRLNKLPDLIKRISESQNKRIPSAVLNDVIMDAIAINPTP-TDKGK 378
Query: 581 RGRVYYCTQLLLGIFVRSAFRYGALGPLHIKYDLLQAAVRPPTFVFFVNDAKLFPETYRR 640
R +++Y TQ+ +V+PPTFV FVN+ +L +Y R
Sbjct: 379 RLKIFYATQV---------------------------SVKPPTFVVFVNEEELMHFSYLR 411
Query: 641 YMEKQLRADAGFSGTPIRLLWRSRR 665
++E Q+RA F GTPI L+ R R+
Sbjct: 412 FLENQIRAAFTFEGTPIHLIARKRK 436
>sp|P64064|DER_STRP1 GTPase Der OS=Streptococcus pyogenes serotype M1 GN=der PE=3 SV=1
Length = 436
Score = 356 bits (914), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 204/505 (40%), Positives = 295/505 (58%), Gaps = 71/505 (14%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+LP VAIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W +F L+DTGG+
Sbjct: 2 VLPTVAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATGEWLNRQFSLIDTGGI 61
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+V A I+ QA A+EE+ VI+F+V
Sbjct: 62 DDVD------------------------------APFMEQIKHQAQIAMEEADVIVFVVS 91
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G+ G+T ADE ++ L + + +ILAVNK ++P + +F+SLG P P+S++
Sbjct: 92 GKEGVTDADEYVSKILYRT--NTPVILAVNKVDNPEMR-NDIYDFYSLGLGDPYPVSSVH 148
Query: 341 GTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
G GTG++LD + L E EE + I +++GRPNVGKSS++NA++GEDR I S
Sbjct: 149 GIGTGDVLDAIVENLPVEEA-----EENDDIIRFSLIGRPNVGKSSLINAILGEDRVIAS 203
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
P++GTTRDAIDT FT +GQ+F +IDTAG+RK I + TE SV RA RAI RSDV
Sbjct: 204 PVAGTTRDAIDTHFTDADGQEFTMIDTAGMRKSGKIYEN---TEKYSVMRAMRAIDRSDV 260
Query: 461 VALVIEAMACITEQDCRIAERIEQEGKGCLIVVNKWDTIPNKNQQTATYYEQDVREKLRA 520
V +VI A I E D RIA + GKG +IVVNKWDTI +K+ T +E D+R++ +
Sbjct: 261 VLMVINAEEGIREYDKRIAGFAHEAGKGMIIVVNKWDTI-DKDNHTVAKWEADIRDQFQF 319
Query: 521 LDWAPIVYSTAIAGQSVDKIIVAAEMVDKERSRRLSTATINQVVQEAVAFKSPPRTRGGR 580
L +API++ +A+ Q ++K+ + + + +++R+ +A +N V+ +A+A P T G+
Sbjct: 320 LTYAPIIFVSALTKQRLNKLPDLIKRISESQNKRIPSAVLNDVIMDAIAINPTP-TDKGK 378
Query: 581 RGRVYYCTQLLLGIFVRSAFRYGALGPLHIKYDLLQAAVRPPTFVFFVNDAKLFPETYRR 640
R +++Y TQ+ +V+PPTFV FVN+ +L +Y R
Sbjct: 379 RLKIFYATQV---------------------------SVKPPTFVVFVNEEELMHFSYLR 411
Query: 641 YMEKQLRADAGFSGTPIRLLWRSRR 665
++E Q+RA F GTPI L+ R R+
Sbjct: 412 FLENQIRAAFTFEGTPIHLIARKRK 436
>sp|Q5M5X5|DER_STRT2 GTPase Der OS=Streptococcus thermophilus (strain ATCC BAA-250 / LMG
18311) GN=der PE=3 SV=1
Length = 436
Score = 356 bits (914), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 210/505 (41%), Positives = 296/505 (58%), Gaps = 73/505 (14%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y + W +F L+DTGG+
Sbjct: 3 LPTVAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYTSAEWLNRQFSLIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+ E+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAGIAMTEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L K +K +ILAVNK ++P + +F+SLG P P+S++ G
Sbjct: 93 KEGVTDADEYVARILYKT--NKPVILAVNKVDNPEMR-ADIYDFYSLGLGDPYPVSSVHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEEN-RIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
GTG++LD + L TE VEEEN I +++GRPNVGKSS++NA++GEDR I S
Sbjct: 150 IGTGDVLDAIVGNLP----TE--VEEENPDIIRFSLIGRPNVGKSSLINAILGEDRVIAS 203
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
PI+GTTRDAIDT F EGQ++ +IDTAG+RK + + TE S+ R+ RAI RSDV
Sbjct: 204 PIAGTTRDAIDTNFVDSEGQEYTMIDTAGMRKSGKVYEN---TEKYSIMRSMRAIDRSDV 260
Query: 461 VALVIEAMACITEQDCRIAERIEQEGKGCLIVVNKWDTIPNKNQQTATYYEQDVREKLRA 520
V +VI A I E D RIA + GKG +IVVNKWDTI K+ T +E D+R++ +
Sbjct: 261 VLMVINAEEGIREYDKRIAGFAHEAGKGIIIVVNKWDTI-KKDNHTVANWEADIRDQFQF 319
Query: 521 LDWAPIVYSTAIAGQSVDKIIVAAEMVDKERSRRLSTATINQVVQEAVAFKSPPRTRGGR 580
L +APIV+ +A Q ++K+ + + + ++RR+S+A +N V+ +A+A P T G+
Sbjct: 320 LSYAPIVFVSAKTKQRLNKLPEMIKRISESQNRRISSAVLNDVIMDAIAINPTP-TDKGK 378
Query: 581 RGRVYYCTQLLLGIFVRSAFRYGALGPLHIKYDLLQAAVRPPTFVFFVNDAKLFPETYRR 640
R +++Y TQ+ +V+PPTFV FVN+ +L +Y R
Sbjct: 379 RLKIFYGTQV---------------------------SVKPPTFVIFVNEEELMHFSYMR 411
Query: 641 YMEKQLRADAGFSGTPIRLLWRSRR 665
++E Q+R GF GTPI L+ R R+
Sbjct: 412 FLENQIRQAFGFEGTPIHLIARKRK 436
Score = 57.0 bits (136), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 89/195 (45%), Gaps = 44/195 (22%)
Query: 155 IGNVPEHL------LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFW 208
+GN+P + + R +++GRPNVGKS+L N ++G +R I G TRD +
Sbjct: 160 VGNLPTEVEEENPDIIRFSLIGRPNVGKSSLINAILGEDRVIASPIAGTTRDAIDTNFVD 219
Query: 209 GE-HEFMLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQAT 267
E E+ ++DT G+ K N T + ++ R +
Sbjct: 220 SEGQEYTMIDTAGMRKSGKVYEN-------------------TEKYSIMR--------SM 252
Query: 268 AAIEESCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVS--- 324
AI+ S V++ +++ + G+ D+ IA + + K II+ VNK ++ +K V+
Sbjct: 253 RAIDRSDVVLMVINAEEGIREYDKRIAGFAHE--AGKGIIIVVNKWDTIKKDNHTVANWE 310
Query: 325 -----EFWSLGFSPL 334
+F L ++P+
Sbjct: 311 ADIRDQFQFLSYAPI 325
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.133 0.378
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 247,642,220
Number of Sequences: 539616
Number of extensions: 10885010
Number of successful extensions: 69293
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1953
Number of HSP's successfully gapped in prelim test: 1066
Number of HSP's that attempted gapping in prelim test: 54142
Number of HSP's gapped (non-prelim): 8344
length of query: 693
length of database: 191,569,459
effective HSP length: 125
effective length of query: 568
effective length of database: 124,117,459
effective search space: 70498716712
effective search space used: 70498716712
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 65 (29.6 bits)