Query 005508
Match_columns 693
No_of_seqs 410 out of 2658
Neff 5.5
Searched_HMMs 29240
Date Tue Mar 26 18:46:30 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/005508.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_2013-2017//hhsearch_pdb/005508hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1vhn_A Putative flavin oxidore 1.0 1 1 424.1 23.3 301 336-670 1-306 (318)
2 3b0p_A TRNA-dihydrouridine syn 1.0 1 1 411.5 24.5 301 337-670 1-314 (350)
3 2r14_A Morphinone reductase; H 1.0 1 1 299.0 21.8 246 326-577 10-347 (377)
4 1vyr_A Pentaerythritol tetrani 1.0 1 1 293.4 23.6 245 326-577 4-342 (364)
5 2hsa_B 12-oxophytodienoate red 1.0 1 1 291.6 21.7 246 326-578 17-368 (402)
6 1icp_A OPR1, 12-oxophytodienoa 1.0 1 1 290.4 20.7 247 326-577 15-349 (376)
7 2gou_A Oxidoreductase, FMN-bin 1.0 1 1 287.8 22.5 245 326-577 4-341 (365)
8 1z41_A YQJM, probable NADH-dep 1.0 1 1 287.8 25.5 245 326-576 4-325 (338)
9 1o94_A Tmadh, trimethylamine d 1.0 1 1 286.5 19.9 244 326-576 8-339 (729)
10 1ps9_A 2,4-dienoyl-COA reducta 1.0 1 1 281.6 21.3 245 326-576 4-328 (671)
No 1
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=1.00 E-value=1 Score=424.15 Aligned_cols=301 Identities=24% Similarity=0.400 Sum_probs=274.4
Q ss_pred CCCCCCEEECCCCCCCCHHHHHHHHHCCCCEEEECCCCCCHHCCCCHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHH
Q ss_conf 21169388756989793999999999099989916510000002882344533026799919999058889999999999
Q 005508 336 IDFREKLYLAPLTTVGNLPFRRVCKVLGADVTCGEMAMCTNLLQGQASEWALLRRHSSEDLFGVQICGAYPDTLARTVEL 415 (693)
Q Consensus 336 l~l~nrl~LAPMt~vtdlpFRrl~~~~Gadl~~TEMv~a~~L~~g~~~e~~ll~~h~~e~pigvQL~G~~pe~~a~AAe~ 415 (693)
+.++||+++|||+++++++||++++++|+|++||||+++.++.++....|..+ .|..+.|+++||+|++|+.|+++|++
T Consensus 1 ~~l~nri~~APM~~~t~~~~r~~~~~~G~gli~te~~~~~~~~~~~~~~~~~l-~~~~~~~~~~QL~g~~~~~~~~aa~~ 79 (318)
T 1vhn_A 1 MSLEVKVGLAPMAGYTDSAFRTLAFEWGADFAFSEMVSAKGFLMNSQKTEELL-PQPHERNVAVQIFGSEPNELSEAARI 79 (318)
T ss_dssp ----CEEEECCCTTTCSHHHHHHHHTTTCCCEECSCEEHHHHHTTCHHHHHHS-CCTTCTTEEEEEECSCHHHHHHHHHH
T ss_pred CCCCCCEEECCCCCCCCHHHHHHHHHHCCCEEEECCEEECCCCCCCHHHHHHH-HCCCCCEEEEEECCCCHHHHHHHHHH
T ss_conf 92588877899999970999999999794999969888752113887699851-07689969999089999999999999
Q ss_pred HHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCC
Q ss_conf 76518986999838899743112774300137938999999984065445779984589989946899999999975987
Q 005508 416 IDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTVDKPITIKVRTGYFEGKNRIDSLIADIGTWGAS 495 (693)
Q Consensus 416 l~~~aG~D~IDLN~GCP~~~v~~~G~GsaLl~rp~~l~eIikai~~~v~iPVTVKiR~G~~e~~~~a~~la~~L~e~Gvd 495 (693)
+. .+ ||+||||+|||..+++++++|++|+++++++.++|+++++++++||+||+|.||++.. ..++++.++++|++
T Consensus 80 a~-~~-~d~Iein~gcP~~~~r~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~G~~~~~--~~~~a~~l~~~G~d 155 (318)
T 1vhn_A 80 LS-EK-YKWIDLNAGCPVRKVVKEGAGGALLKDLRHFRYIVRELRKSVSGKFSVKTRLGWEKNE--VEEIYRILVEEGVD 155 (318)
T ss_dssp HT-TT-CSEEEEEECCCCHHHHHTTCGGGGGSCHHHHHHHHHHHHHHCSSEEEEEEESCSSSCC--HHHHHHHHHHTTCC
T ss_pred HH-HH-CCEEEEECCCCCHHCCCCCCCCCHHHCHHHHHHHHHHHHHHHCCCEEEEECCCCCHHH--HHHHHHHHHHHCCC
T ss_conf 99-76-8999997889707328887101154299999999999997508977999627898688--99999999971989
Q ss_pred EEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHCCCCCCEEEECHHHHHCCCCHHHHHH--
Q ss_conf 899963445686678764999999999829994499929878988799987139996789771787628970367874--
Q 005508 496 AVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMIARGALIKPWIFTEIKE-- 573 (693)
Q Consensus 496 aItIHgRtr~qryt~~Adw~~I~~i~~~~~~~IPVIgNGdI~S~eDa~~~l~~~~gaDgVMIGRGaL~nPwiF~eIk~-- 573 (693)
+|+||+|++.++|+++++|+++.++++ ++|||+||||.|++|+.++++. .|||+|||||++|.|||+|.++++
T Consensus 156 ~i~v~g~~~~~~~~~~~~~~~i~~i~~----~ipVi~~GgI~s~~da~~~l~~-~gad~V~iGR~~l~~P~l~~~~~~~~ 230 (318)
T 1vhn_A 156 EVFIHTRTVVQSFTGRAEWKALSVLEK----RIPTFVSGDIFTPEDAKRALEE-SGCDGLLVARGAIGRPWIFKQIKDFL 230 (318)
T ss_dssp EEEEESSCTTTTTSSCCCGGGGGGSCC----SSCEEEESSCCSHHHHHHHHHH-HCCSEEEESGGGTTCTTHHHHHHHHH
T ss_pred EEEECCCCCCCCCCCCCCHHHHHHHHC----CCEEEEECCCCCHHHHHHHHHC-CCCCEEEECHHHHHCCCHHHHHHHHH
T ss_conf 999868883214789768799999970----9949998896999999999975-99999998879885924689999998
Q ss_pred --CCCC-CCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHH
Q ss_conf --0689-9997899999999999999861597213799999999999976500788643446543479999999985576
Q 005508 574 --QRHW-DITSGERLNIMKDFARFGLEHWGSDKKGVETTRHFLLEWLSYTCRYIPVGLLDVIPQRLNWRPPAYSGRDDLE 650 (693)
Q Consensus 574 --~~~~-d~s~~Erl~il~~~~~~~le~~gsd~~gv~~~Rrfl~ewls~~~ryiP~glle~~p~~~n~rpp~~~~R~~le 650 (693)
+ .+ .++..++++++++|++..++++|. ..++..+|+|+. +|.+++|.+ ...| .
T Consensus 231 ~~g-~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~----~~~~~~~~~---------------~~~r---~ 286 (318)
T 1vhn_A 231 RSG-KYSEPSREEILRTFERHLELLIKTKGE-RKAVVEMRKFLA----GYTKDLKGA---------------RRFR---E 286 (318)
T ss_dssp HHS-CCCCCCHHHHHHHHHHHHHHHHHHHCH-HHHHHHHHTTHH----HHTTTCTTH---------------HHHH---H
T ss_pred HCC-CCCCCCHHHHHHHHHHHHHHHHHHCCC-HHHHHHHHHHHH----HHHHCCCCH---------------HHHH---H
T ss_conf 379-999877999999999999999986282-379999999999----998549976---------------9999---9
Q ss_pred HHHCCCCHHHHHHHHHHHCC
Q ss_conf 87427998999999998629
Q 005508 651 TLMASDSAADWIRISEMLLG 670 (693)
Q Consensus 651 tL~~s~~~~dw~ki~e~~lg 670 (693)
.|+.+.+..++.++.+.++.
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~ 306 (318)
T 1vhn_A 287 KVMKIEEVQILKEMFYNFIK 306 (318)
T ss_dssp HHTTCCCHHHHHHHHHHHHH
T ss_pred HHHCCCCHHHHHHHHHHHHH
T ss_conf 98728999999999999987
No 2
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=1.00 E-value=1 Score=411.51 Aligned_cols=301 Identities=21% Similarity=0.292 Sum_probs=258.7
Q ss_pred CCCCCEEECCCCCCCCHHHHHHHHHCCC-CEEEECCCCCCHHCCCCHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHH
Q ss_conf 1169388756989793999999999099-989916510000002882344533026799919999058889999999999
Q 005508 337 DFREKLYLAPLTTVGNLPFRRVCKVLGA-DVTCGEMAMCTNLLQGQASEWALLRRHSSEDLFGVQICGAYPDTLARTVEL 415 (693)
Q Consensus 337 ~l~nrl~LAPMt~vtdlpFRrl~~~~Ga-dl~~TEMv~a~~L~~g~~~e~~ll~~h~~e~pigvQL~G~~pe~~a~AAe~ 415 (693)
.++||+++|||+++|+.+||++|+.+|. |++||||+++..++++..+ .++..|+.+.|+++||+|++|+.|++||++
T Consensus 1 ~l~nriv~APM~g~td~~~r~~~r~~Gg~gli~te~~~~~~~~~~~~~--~~~~~~~~~~p~~vQL~g~~p~~~~~aA~~ 78 (350)
T 3b0p_A 1 MLDPRLSVAPMVDRTDRHFRFLVRQVSLGVRLYTEMTVDQAVLRGNRE--RLLAFRPEEHPIALQLAGSDPKSLAEAARI 78 (350)
T ss_dssp -CCCSEEECCCTTTSSHHHHHHHHHHCSSSBEECCCEEHHHHHHSCHH--HHHCCCGGGCSEEEEEECSCHHHHHHHHHH
T ss_pred CCCCCEEECCCCCCCHHHHHHHHHHCCCCCEEEECCEEECHHHCCCHH--HHHCCCCCCCEEEEEECCCCHHHHHHHHHH
T ss_conf 999898879989798799999999829998999598786632258989--972018789959999689999999999999
Q ss_pred HHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCH--HHHHHHHHHHHHCC
Q ss_conf 7651898699983889974311277430013793899999998406544577998458998994--68999999999759
Q 005508 416 IDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTVDKPITIKVRTGYFEGK--NRIDSLIADIGTWG 493 (693)
Q Consensus 416 l~~~aG~D~IDLN~GCP~~~v~~~G~GsaLl~rp~~l~eIikai~~~v~iPVTVKiR~G~~e~~--~~a~~la~~L~e~G 493 (693)
+. .+|||+||||+|||.+++++++||++|+++++++.+||+++++++++||+||+|+||++.. .++.++++.++++|
T Consensus 79 a~-~~G~D~IeIn~gcP~~~~~~d~~G~~l~~~~~~~~eiv~av~~~v~~PV~vKiR~g~~~~~~~~~~~~~a~~l~~aG 157 (350)
T 3b0p_A 79 GE-AFGYDEINLNLGCPSEKAQEGGYGACLLLDLARVREILKAMGEAVRVPVTVKMRLGLEGKETYRGLAQSVEAMAEAG 157 (350)
T ss_dssp HH-HTTCSEEEEEECCCSHHHHHTTCGGGGGGCHHHHHHHHHHHHHHCSSCEEEEEESCBTTCCCHHHHHHHHHHHHHTT
T ss_pred HH-HCCCCEEEECCCCCCCCCCCCCCCHHHHHCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCC
T ss_conf 99-76989999878389976768973145774999999999999987198669998158676636889999999999759
Q ss_pred CCEEEEECCCCCCCCCC-------CCCHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHCCCCCCEEEECHHHHHCCC
Q ss_conf 87899963445686678-------76499999999982999449992987898879998713999678977178762897
Q 005508 494 ASAVTVHGRTRQQRYSK-------LADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMIARGALIKPW 566 (693)
Q Consensus 494 vdaItIHgRtr~qryt~-------~Adw~~I~~i~~~~~~~IPVIgNGdI~S~eDa~~~l~~~~gaDgVMIGRGaL~nPw 566 (693)
+++|+||+|++.+.|++ +++|+++.++++.++ ++|||+||||.|++|+.++++ |+|+|||||++|.|||
T Consensus 158 ~d~I~V~~r~~~~g~~g~~~~~~~~~~~~~i~~ik~~~~-~iPVianGgI~s~eda~~~l~---GaD~V~iGRa~l~~P~ 233 (350)
T 3b0p_A 158 VKVFVVHARSALLALSTKANREIPPLRHDWVHRLKGDFP-QLTFVTNGGIRSLEEALFHLK---RVDGVMLGRAVYEDPF 233 (350)
T ss_dssp CCEEEEECSCBC----------CCCCCHHHHHHHHHHCT-TSEEEEESSCCSHHHHHHHHT---TSSEEEECHHHHHCGG
T ss_pred CCEEEEECCCHHCCCCCCCCCCCCCCCHHHHHHHHHHCC-CCEEEEECCCCCHHHHHHHHH---CCCEEEECHHHHHCCH
T ss_conf 999999068242166764345787445999999998679-973999799289999999993---8999999779785968
Q ss_pred CHHHHHHCCCC---CCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
Q ss_conf 03678740689---999789999999999999986159721379999999999997650078864344654347999999
Q 005508 567 IFTEIKEQRHW---DITSGERLNIMKDFARFGLEHWGSDKKGVETTRHFLLEWLSYTCRYIPVGLLDVIPQRLNWRPPAY 643 (693)
Q Consensus 567 iF~eIk~~~~~---d~s~~Erl~il~~~~~~~le~~gsd~~gv~~~Rrfl~ewls~~~ryiP~glle~~p~~~n~rpp~~ 643 (693)
||.++++.... .++..|+++.+.+|+...++ +|. ++..+|||+. ||.+++|.+ .
T Consensus 234 l~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~g~---~~~~~~kh~~----~~~~g~~~~---------------~ 290 (350)
T 3b0p_A 234 VLEEADRRVFGLPRRPSRLEVARRMRAYLEEEVL-KGT---PPWAVLRHML----NLFRGRPKG---------------R 290 (350)
T ss_dssp GGTTHHHHTTCCSCCCCHHHHHHHHHHHHHHHHH-HTC---CHHHHHTTST----TTTTTSTTH---------------H
T ss_pred HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH-CCC---CHHHHHHHHH----HHHCCCCCH---------------H
T ss_conf 9999999815799998999999999999999987-394---4999999999----997169888---------------9
Q ss_pred CCCCHHHHHHCCCCHHHHHHHHHHHCC
Q ss_conf 998557687427998999999998629
Q 005508 644 SGRDDLETLMASDSAADWIRISEMLLG 670 (693)
Q Consensus 644 ~~R~~letL~~s~~~~dw~ki~e~~lg 670 (693)
..| ..|+...+..++.++++.+..
T Consensus 291 ~~r---~~l~~~~~~~~~~~~l~~~~~ 314 (350)
T 3b0p_A 291 LWR---RLLSEGRSLQALDRALRLMEE 314 (350)
T ss_dssp HHH---HHHHHHCSHHHHHHHHHHHHH
T ss_pred HHH---HHHHCCCCHHHHHHHHHHHHH
T ss_conf 999---998778999999999998755
No 3
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=1.00 E-value=1 Score=299.05 Aligned_cols=246 Identities=10% Similarity=0.083 Sum_probs=211.8
Q ss_pred CCCCCCCCCCCCCCCCEEECCCCCC-------CCHHHHHHHHHCCCCEEEECCCCCCHHCCCCH-----------HHHHH
Q ss_conf 7767644478211693887569897-------93999999999099989916510000002882-----------34453
Q 005508 326 LKTHSREKKLIDFREKLYLAPLTTV-------GNLPFRRVCKVLGADVTCGEMAMCTNLLQGQA-----------SEWAL 387 (693)
Q Consensus 326 ~~~~p~ekk~l~l~nrl~LAPMt~v-------tdlpFRrl~~~~Gadl~~TEMv~a~~L~~g~~-----------~e~~l 387 (693)
.-|.|.+++++.|+||+++|||++. ++..+++++.+.|+++++|||+.+.+...+.. ..|+.
T Consensus 10 ~Lf~P~~ig~~~l~NRiv~aPm~~~~a~~g~pt~~~~~~y~~rA~~GLiitE~~~v~~~g~~~~~~~gi~~d~~i~~~k~ 89 (377)
T 2r14_A 10 GLFTPLQLGSLSLPNRVIMAPLTRSRTPDSVPGRLQQIYYGQRASAGLIISEATNISPTARGYVYTPGIWTDAQEAGWKG 89 (377)
T ss_dssp CTTSCEEETTEEESCSEEECCCCCCCCTTSCCCHHHHHHHHHTTTSSCEEEEEEESSGGGCCBTTCCBSSSHHHHHHHHH
T ss_pred HCCCCEEECCEEECCCEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEECCEEECCCCCCCCCCCCCCCHHHHHHHHH
T ss_conf 42898158999864971889976776789989999999999985598799745353565456899762588889999999
Q ss_pred H--HCCCCCCEEEEEECCC-------------------------------------------CH------------HHHH
Q ss_conf 3--0267999199990588-------------------------------------------89------------9999
Q 005508 388 L--RRHSSEDLFGVQICGA-------------------------------------------YP------------DTLA 410 (693)
Q Consensus 388 l--~~h~~e~pigvQL~G~-------------------------------------------~p------------e~~a 410 (693)
+ ..|..+.++++||++. .| +.|+
T Consensus 90 l~~avh~~G~~i~~QL~H~Gr~~~~~~~~~~~~~~apS~i~~~~~~~~~~~~~~~~~~~~~~~p~~mt~~eI~~~i~~f~ 169 (377)
T 2r14_A 90 VVEAVHAKGGRIALQLWHVGRVSHELVQPDGQQPVAPSALKAEGAECFVEFEDGTAGLHPTSTPRALETDEIPGIVEDYR 169 (377)
T ss_dssp HHHHHHHTTCCEEEEEECCTTSCCTTTSGGGCCCEESSSCCCTTCEEEEECTTSCEEEEECCCCEECCGGGHHHHHHHHH
T ss_pred HHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 99998525986999721775555644356888633787665565533333222345666888875489999999999999
Q ss_pred HHHHHHHHHCCCCEEEECCCC---------CCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCC-CCEEEEECCC-CC---
Q ss_conf 999997651898699983889---------974311277430013793899999998406544-5779984589-98---
Q 005508 411 RTVELIDQQCTVDFIDINMGC---------PIDIVVNKGAGSCLLTKPMRMKGIIEATSGTVD-KPITIKVRTG-YF--- 476 (693)
Q Consensus 411 ~AAe~l~~~aG~D~IDLN~GC---------P~~~v~~~G~GsaLl~rp~~l~eIikai~~~v~-iPVTVKiR~G-~~--- 476 (693)
+||+++. ++|||+||||++| |..+.+.+.||++|++|++++.+||++|+++++ .||+||++.. +.
T Consensus 170 ~aA~~a~-~aGfDgVEIh~a~GYLl~QFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~~~v~vrls~~~~~~~~ 248 (377)
T 2r14_A 170 QAAQRAK-RAGFDMVEVHAANACLPNQFLATGTNRRTDQYGGSIENRARFPLEVVDAVAEVFGPERVGIRLTPFLELFGL 248 (377)
T ss_dssp HHHHHHH-HHTCSEEEEEECTTCHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCCTTC
T ss_pred HHHHHHH-HCCCCEEEECCCCCCHHHHCCCCCCCCCCCCCCCCHHHCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCC
T ss_conf 9999998-727998998675663387636874466777667664445688999999999872887379996265455787
Q ss_pred ---CCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHCCCCCC
Q ss_conf ---99468999999999759878999634456866787649999999998299944999298789887999871399967
Q 005508 477 ---EGKNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELA 553 (693)
Q Consensus 477 ---e~~~~a~~la~~L~e~GvdaItIHgRtr~qryt~~Adw~~I~~i~~~~~~~IPVIgNGdI~S~eDa~~~l~~~~gaD 553 (693)
.+.+++.++++.|++.|+++|+||+|+..+.+.+ .+|++++++++.+ ++|||+||+| +++++.++++. ++||
T Consensus 249 ~~~~~~~~~~~la~~le~~Gvd~i~v~~~~~~~~~~~-~~~~~~~~ik~~~--~iPvi~~Ggi-~~~~a~~~l~~-g~aD 323 (377)
T 2r14_A 249 TDDEPEAMAFYLAGELDRRGLAYLHFNEPDWIGGDIT-YPEGFREQMRQRF--KGGLIYCGNY-DAGRAQARLDD-NTAD 323 (377)
T ss_dssp CCSCHHHHHHHHHHHHHHTTCSEEEEECCC------C-CCTTHHHHHHHHC--CSEEEEESSC-CHHHHHHHHHT-TSCS
T ss_pred CCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCC-CHHHHHHHHHHHC--CCCEEEECCC-CHHHHHHHHHC-CCCE
T ss_conf 7888999999999999973998899807855678886-5399999999978--9988997998-99999999977-9950
Q ss_pred EEEECHHHHHCCCCHHHHHHCCCC
Q ss_conf 897717876289703678740689
Q 005508 554 SCMIARGALIKPWIFTEIKEQRHW 577 (693)
Q Consensus 554 gVMIGRGaL~nPwiF~eIk~~~~~ 577 (693)
+||+||++|.||||+.++++++.+
T Consensus 324 ~V~igR~~l~~P~l~~k~~~g~~l 347 (377)
T 2r14_A 324 AVAFGRPFIANPDLPERFRLGAAL 347 (377)
T ss_dssp EEEESHHHHHCTTHHHHHHHTCCC
T ss_pred EEEECHHHHHCCHHHHHHHCCCCC
T ss_conf 884458978593599999719988
No 4
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=1.00 E-value=1 Score=293.41 Aligned_cols=245 Identities=12% Similarity=0.165 Sum_probs=209.6
Q ss_pred CCCCCCCCCCCCCCCCEEECCCCCC---------CCHHHHHHHHHCCCCEEEECCCCCCHHCCCCH-----------HHH
Q ss_conf 7767644478211693887569897---------93999999999099989916510000002882-----------344
Q 005508 326 LKTHSREKKLIDFREKLYLAPLTTV---------GNLPFRRVCKVLGADVTCGEMAMCTNLLQGQA-----------SEW 385 (693)
Q Consensus 326 ~~~~p~ekk~l~l~nrl~LAPMt~v---------tdlpFRrl~~~~Gadl~~TEMv~a~~L~~g~~-----------~e~ 385 (693)
.-|.|.+++++.|+||+++|||++. ++..+++++.+.|+++++|||+.+.+...+.. ..|
T Consensus 4 ~Lf~P~~ig~~~l~NRiv~aPm~~~~a~~~~g~~t~~~~~~y~~rAg~GLiite~~~v~~~g~~~~~~~gi~~d~~i~~~ 83 (364)
T 1vyr_A 4 KLFTPLKVGAVTAPNRVFMAPLTRLRSIEPGDIPTPLMGEYYRQRASAGLIISEATQISAQAKGYAGAPGLHSPEQIAAW 83 (364)
T ss_dssp STTSCEEETTEEESSSEEECCCCCCCCBTTTTBCCHHHHHHHHHTTTSSEEEEEEEESSSTTCCSTTCCBSSSHHHHHHH
T ss_pred CCCCCEEECCEEECCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHH
T ss_conf 05899348999877821889977776659999879999999999836887997660105644578997635899999999
Q ss_pred HHH--HCCCCCCEEEEEECC------------------------------------------CCH------------HHH
Q ss_conf 533--026799919999058------------------------------------------889------------999
Q 005508 386 ALL--RRHSSEDLFGVQICG------------------------------------------AYP------------DTL 409 (693)
Q Consensus 386 ~ll--~~h~~e~pigvQL~G------------------------------------------~~p------------e~~ 409 (693)
+.+ ..|..+.++++||++ ..| ++|
T Consensus 84 ~~l~~~vh~~g~~i~~QL~H~Gr~~~~~~~~~g~~~~apS~i~~~~~~~~~~~~g~~~~~~~~~p~~mt~~eI~~~i~~f 163 (364)
T 1vyr_A 84 KKITAGVHAEDGRIAVQLWHTGRISHSSIQPGGQAPVSASALNANTRTSLRDENGNAIRVDTTTPRALELDEIPGIVNDF 163 (364)
T ss_dssp HHHHHHHHHTTCCEEEEEECCTTSSCGGGSGGGCCCEESSSCCCCSEEEEECTTSCEEEEECCCCEECCGGGHHHHHHHH
T ss_pred HHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 99999998569959998506876657443668986206877656665323344554345688888749999999999999
Q ss_pred HHHHHHHHHHCCCCEEEECCCC---------CCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCC-CCEEEEECCC--CCC
Q ss_conf 9999997651898699983889---------974311277430013793899999998406544-5779984589--989
Q 005508 410 ARTVELIDQQCTVDFIDINMGC---------PIDIVVNKGAGSCLLTKPMRMKGIIEATSGTVD-KPITIKVRTG--YFE 477 (693)
Q Consensus 410 a~AAe~l~~~aG~D~IDLN~GC---------P~~~v~~~G~GsaLl~rp~~l~eIikai~~~v~-iPVTVKiR~G--~~e 477 (693)
++||+++. ++|||+||||++| |..+.+.+.||++|++|++++.+||++|+++++ .||+|||+.+ |.+
T Consensus 164 ~~aA~~a~-~aGfDgVeih~a~GyLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~vg~~~v~vrls~~~~~~~ 242 (364)
T 1vyr_A 164 RQAVANAR-EAGFDLVELHSAHGYLLHQFLSPSSNQRTDQYGGSVENRARLVLEVVDAVCNEWSADRIGIRVSPIGTFQN 242 (364)
T ss_dssp HHHHHHHH-HTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHSCGGGEEEEECCSSCBTT
T ss_pred HHHHHHHH-HCCCCEEEECCCCCHHHHHCCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCC
T ss_conf 99999999-84999999847564488863598534667767766320715699999999986389818999815313566
Q ss_pred ------CHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHCCCC
Q ss_conf ------94689999999997598789996344568667876499999999982999449992987898879998713999
Q 005508 478 ------GKNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPE 551 (693)
Q Consensus 478 ------~~~~a~~la~~L~e~GvdaItIHgRtr~qryt~~Adw~~I~~i~~~~~~~IPVIgNGdI~S~eDa~~~l~~~~g 551 (693)
+.+++.++++.|++.|+++|++|+|+..+.+ ...|++++++++.+ ++|||+||+| +++++.++++. .+
T Consensus 243 ~~~~~~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~--~~~~~~~~~v~~~~--~iPvi~~Ggi-t~~~a~~~l~~-g~ 316 (364)
T 1vyr_A 243 VDNGPNEEADALYLIEELAKRGIAYLHMSETDLAGGK--PYSEAFRQKVRERF--HGVIIGAGAY-TAEKAEDLIGK-GL 316 (364)
T ss_dssp BCCCTTHHHHHHHHHHHHHHTTCSEEEEECCBTTBCC--CCCHHHHHHHHHHC--CSEEEEESSC-CHHHHHHHHHT-TS
T ss_pred CCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCC--CCCHHHHHHHHHHC--CCCEEEECCC-CHHHHHHHHHC-CC
T ss_conf 6678988999999999999819988998068656787--66399999999977--9988997995-99999999977-99
Q ss_pred CCEEEECHHHHHCCCCHHHHHHCCCC
Q ss_conf 67897717876289703678740689
Q 005508 552 LASCMIARGALIKPWIFTEIKEQRHW 577 (693)
Q Consensus 552 aDgVMIGRGaL~nPwiF~eIk~~~~~ 577 (693)
||+||+||++|.||||+.++++++.+
T Consensus 317 aD~V~~gR~~l~~P~~~~~~~~g~~l 342 (364)
T 1vyr_A 317 IDAVAFGRDYIANPDLVARLQKKAEL 342 (364)
T ss_dssp CSEEEESHHHHHCTTHHHHHHHTCCC
T ss_pred CCEEEECHHHHHCHHHHHHHHCCCCC
T ss_conf 63899878978591299999729988
No 5
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=1.00 E-value=1 Score=291.63 Aligned_cols=246 Identities=11% Similarity=0.079 Sum_probs=204.6
Q ss_pred CCCCCCCCCCCCCCCCEEECCCCCCC---CHH-------HHHHHHHCCCCEEEECCCCCCHHCCCCH-----------HH
Q ss_conf 77676444782116938875698979---399-------9999999099989916510000002882-----------34
Q 005508 326 LKTHSREKKLIDFREKLYLAPLTTVG---NLP-------FRRVCKVLGADVTCGEMAMCTNLLQGQA-----------SE 384 (693)
Q Consensus 326 ~~~~p~ekk~l~l~nrl~LAPMt~vt---dlp-------FRrl~~~~Gadl~~TEMv~a~~L~~g~~-----------~e 384 (693)
.-|.|.+++++.|+||+++|||++.. +.| |++.++ |+++++|||+.+.+...+.. ..
T Consensus 17 ~Lf~P~~ig~~~L~NRiv~aPm~~~~a~~g~pt~~~~~yy~~rA~--G~GLIitE~~~v~~~g~~~~~~~gi~~d~~i~~ 94 (402)
T 2hsa_B 17 PLFSPYKMGKFNLSHRVVLAPMTRCRALNNIPQAALGEYYEQRAT--AGGFLITEGTMISPTSAGFPHVPGIFTKEQVRE 94 (402)
T ss_dssp CTTSCEEETTEEESCSEEECCCCCCCSGGGCCCHHHHHHHHHHCC--TTCEEECCCEESSTTCCCSTTCCBCSSHHHHHH
T ss_pred HCCCCEEECCEEECCCEEECCCCCCCCCCCCCCHHHHHHHHHHHC--CCCEEEECCEEECCCCCCCCCCCCCCCHHHHHH
T ss_conf 438994589998638738899777757999899999999999864--588899655010565566899761589899999
Q ss_pred HHHH--HCCCCCCEEEEEECC----------------------------------------CCH------------HHHH
Q ss_conf 4533--026799919999058----------------------------------------889------------9999
Q 005508 385 WALL--RRHSSEDLFGVQICG----------------------------------------AYP------------DTLA 410 (693)
Q Consensus 385 ~~ll--~~h~~e~pigvQL~G----------------------------------------~~p------------e~~a 410 (693)
|+.+ ..|..+.++++||++ ..| +.|+
T Consensus 95 ~k~l~~avh~~G~~i~~QL~H~Gr~~~~~~~~~g~~~~apS~v~~~~~~~~~~~~g~~~~~~~p~~mt~~eI~~ii~~f~ 174 (402)
T 2hsa_B 95 WKKIVDVVHAKGAVIFCQLWHVGRASHEVYQPAGAAPISSTEKPISNRWRILMPDGTHGIYPKPRAIGTYEISQVVEDYR 174 (402)
T ss_dssp HHHHHHHHHHTTCEEEEEEECCTTSCCGGGCTTCCCCEESCSCCCCTTCEEECTTSCEEECCCCEECCGGGHHHHHHHHH
T ss_pred HHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 99999999755991899841277555644366898610577766665432223445556888886589999999999999
Q ss_pred HHHHHHHHHCCCCEEEECCCC---------CCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCC-CCEEEEECCC-CC---
Q ss_conf 999997651898699983889---------974311277430013793899999998406544-5779984589-98---
Q 005508 411 RTVELIDQQCTVDFIDINMGC---------PIDIVVNKGAGSCLLTKPMRMKGIIEATSGTVD-KPITIKVRTG-YF--- 476 (693)
Q Consensus 411 ~AAe~l~~~aG~D~IDLN~GC---------P~~~v~~~G~GsaLl~rp~~l~eIikai~~~v~-iPVTVKiR~G-~~--- 476 (693)
+||+++. ++|||+||||++| |..+.+.+.||++|++|++++.+||++|+++++ .||+|||+.+ |.
T Consensus 175 ~AA~~a~-~AGfDgVEIh~ahGYLl~QFLsp~~N~RtD~yGGslenR~rf~~Eiv~aVr~avg~~~V~vRls~~~~~~g~ 253 (402)
T 2hsa_B 175 RSALNAI-EAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSLANRCKFITQVVQAVVSAIGADRVGVRVSPAIDHLDA 253 (402)
T ss_dssp HHHHHHH-HTTCSEEEEECCTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECSSCCSTTC
T ss_pred HHHHHHH-HCCCCEEEECCCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCC
T ss_conf 9999999-869998998775544777525975576677667674444689999999999972888479995464245777
Q ss_pred -C--CHHHHHHHHHHHHHCC------CCEEEEECCCCCCCCCCC--------CCHHHHHHHHHHCCCCCEEEEECCCCCH
Q ss_conf -9--9468999999999759------878999634456866787--------6499999999982999449992987898
Q 005508 477 -E--GKNRIDSLIADIGTWG------ASAVTVHGRTRQQRYSKL--------ADWDYIYQCARKASDDLQVLGNGDIYSY 539 (693)
Q Consensus 477 -e--~~~~a~~la~~L~e~G------vdaItIHgRtr~qryt~~--------Adw~~I~~i~~~~~~~IPVIgNGdI~S~ 539 (693)
+ ..+++.++++.|+++| +++|+||+++..+.+..+ .+|+++.++++.+ ++|||+||+| ++
T Consensus 254 ~~~~~~~~~~~la~~le~~G~~gg~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~vk~~~--~iPvi~~G~i-~~ 330 (402)
T 2hsa_B 254 MDSNPLSLGLAVVERLNKIQLHSGSKLAYLHVTQPRYVAYGQTEAGRLGSEEEEARLMRTLRNAY--QGTFICSGGY-TR 330 (402)
T ss_dssp CCSCHHHHHHHHHHHHHHHHHHHTSCCSEEEEECCCCCTTTTSSSTTTTHHHHHHHHHHHHHHHC--SSCEEEESSC-CH
T ss_pred CCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHC--CCCEEEECCC-CH
T ss_conf 78877999999999998649866775379998457544456786322468855499999999877--9978996998-99
Q ss_pred HHHHHHHHCCCCCCEEEECHHHHHCCCCHHHHHHCCCCC
Q ss_conf 879998713999678977178762897036787406899
Q 005508 540 LDWNKHKSDCPELASCMIARGALIKPWIFTEIKEQRHWD 578 (693)
Q Consensus 540 eDa~~~l~~~~gaDgVMIGRGaL~nPwiF~eIk~~~~~d 578 (693)
+++.++++. +++|+||+||++|.||||+.+++++..+.
T Consensus 331 ~~a~~~l~~-g~aD~V~igR~~l~dP~l~~k~~~g~~l~ 368 (402)
T 2hsa_B 331 ELGIEAVAQ-GDADLVSYGRLFISNPDLVMRIKLNAPLN 368 (402)
T ss_dssp HHHHHHHHT-TSCSEEEESHHHHHCTTHHHHHHHTCCCC
T ss_pred HHHHHHHHC-CCCCEEEECHHHHHCCHHHHHHHHCCCCC
T ss_conf 999999987-99863623189786932999998089989
No 6
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=1.00 E-value=1 Score=290.44 Aligned_cols=247 Identities=12% Similarity=0.078 Sum_probs=204.2
Q ss_pred CCCCCCCCCCCCCCCCEEECCCCCCC-------CHHHHHHHHHC-CCCEEEECCCCCCHHCCCCH-----------HHHH
Q ss_conf 77676444782116938875698979-------39999999990-99989916510000002882-----------3445
Q 005508 326 LKTHSREKKLIDFREKLYLAPLTTVG-------NLPFRRVCKVL-GADVTCGEMAMCTNLLQGQA-----------SEWA 386 (693)
Q Consensus 326 ~~~~p~ekk~l~l~nrl~LAPMt~vt-------dlpFRrl~~~~-Gadl~~TEMv~a~~L~~g~~-----------~e~~ 386 (693)
.-|.|.+++++.|+||+++|||+++. +....++..+. |+++++|||+.+.+...+.. ..|+
T Consensus 15 ~Lf~P~~ig~~~l~NRiv~aPm~~~~a~~g~pt~~~~~yy~~rA~g~GLiite~~~v~~~g~~~~~~~gi~~d~~i~~~k 94 (376)
T 1icp_A 15 PLMSPCKMGKFELCHRVVLAPLTRQRSYGYIPQPHAILHYSQRSTNGGLLIGEATVISETGIGYKDVPGIWTKEQVEAWK 94 (376)
T ss_dssp GGGSCEEETTEEESCSEEECCCCCCCCGGGSCCHHHHHHHHHTCCTTCEEECCCEECSGGGCCSTTCCBCSSHHHHHHHH
T ss_pred HCCCCEEECCEEECCCCEECCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCEEECCCCCCCCCCCCCCCHHHHHHHH
T ss_conf 44899358999888812889857675799989999999999861870189988634066545576667658999999999
Q ss_pred HH--HCCCCCCEEEEEECCC--------------------------------------CH------------HHHHHHHH
Q ss_conf 33--0267999199990588--------------------------------------89------------99999999
Q 005508 387 LL--RRHSSEDLFGVQICGA--------------------------------------YP------------DTLARTVE 414 (693)
Q Consensus 387 ll--~~h~~e~pigvQL~G~--------------------------------------~p------------e~~a~AAe 414 (693)
.+ ..|..+.++++||++. .| +.|++||+
T Consensus 95 ~l~~avh~~G~~i~~QL~H~Gr~~~~~~~~~~~~~~apS~~~~~~~~~~~~~~~~~~~~p~~mt~~eI~~~i~~f~~AA~ 174 (376)
T 1icp_A 95 PIVDAVHAKGGIFFCQIWHVGRVSNKDFQPNGEDPISCTDRGLTPQIMSNGIDIAHFTRPRRLTTDEIPQIVNEFRVAAR 174 (376)
T ss_dssp HHHHHHHHTTCEEEEEEECCTTSSCTTTSGGGCCCEESSSCCCCCEECTTSSCEECCCCCEECCTTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 99999985599599983038877674435689861447777776543555544457888874999999999999999999
Q ss_pred HHHHHCCCCEEEECCCC---------CCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCC-CCEEEEECCC-C------CC
Q ss_conf 97651898699983889---------974311277430013793899999998406544-5779984589-9------89
Q 005508 415 LIDQQCTVDFIDINMGC---------PIDIVVNKGAGSCLLTKPMRMKGIIEATSGTVD-KPITIKVRTG-Y------FE 477 (693)
Q Consensus 415 ~l~~~aG~D~IDLN~GC---------P~~~v~~~G~GsaLl~rp~~l~eIikai~~~v~-iPVTVKiR~G-~------~e 477 (693)
++. ++|||+||||++| |..+.+.+.||++|++|++++.+||++|+++++ .||+||++.. | .+
T Consensus 175 ~a~-~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~~~V~vrls~~~~~~g~~~~~ 253 (376)
T 1icp_A 175 NAI-EAGFDGVEIHGAHGYLIDQFMKDQVNDRSDKYGGSLENRCRFALEIVEAVANEIGSDRVGIRISPFAHYNEAGDTN 253 (376)
T ss_dssp HHH-HTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCTTTCCCSC
T ss_pred HHH-HCCCCEEEECCCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCC
T ss_conf 999-7599889984766426663469864677776675577768999999999999845785699964622458877888
Q ss_pred CHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHCCCCCCEEEE
Q ss_conf 94689999999997598789996344568667876499999999982999449992987898879998713999678977
Q 005508 478 GKNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMI 557 (693)
Q Consensus 478 ~~~~a~~la~~L~e~GvdaItIHgRtr~qryt~~Adw~~I~~i~~~~~~~IPVIgNGdI~S~eDa~~~l~~~~gaDgVMI 557 (693)
..+++.++++.|+++|+++|++|+++..+.+....+|++++++++.+ ++|||+||+| +++++.++++. ++||+||+
T Consensus 254 ~~~~~~~la~~le~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~vr~~~--~iPvi~~G~i-~~~~a~~~l~~-g~aD~V~~ 329 (376)
T 1icp_A 254 PTALGLYMVESLNKYDLAYCHVVEPRMKTAWEKIECTESLVPMRKAY--KGTFIVAGGY-DREDGNRALIE-DRADLVAY 329 (376)
T ss_dssp HHHHHHHHHHHHGGGCCSEEEEECCSCCC------CCCCSHHHHHHC--CSCEEEESSC-CHHHHHHHHHT-TSCSEEEE
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHC--CCCEEEECCC-CHHHHHHHHHC-CCCCEEEE
T ss_conf 89999999999997499889980786567787522289999999876--9988996898-99999999977-99748965
Q ss_pred CHHHHHCCCCHHHHHHCCCC
Q ss_conf 17876289703678740689
Q 005508 558 ARGALIKPWIFTEIKEQRHW 577 (693)
Q Consensus 558 GRGaL~nPwiF~eIk~~~~~ 577 (693)
||++|.||||+.+++++..+
T Consensus 330 gR~~l~~P~l~~k~~~g~~l 349 (376)
T 1icp_A 330 GRLFISNPDLPKRFELNAPL 349 (376)
T ss_dssp SHHHHHCTTHHHHHHHTCCC
T ss_pred CHHHHHCCCHHHHHHCCCCC
T ss_conf 68978591099999708988
No 7
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=1.00 E-value=1 Score=287.79 Aligned_cols=245 Identities=9% Similarity=0.049 Sum_probs=207.7
Q ss_pred CCCCCCCCCCCCCCCCEEECCCCCCC---------CHHHHHHHHHCCCCEEEECCCCCCHHCCCCH-----------HHH
Q ss_conf 77676444782116938875698979---------3999999999099989916510000002882-----------344
Q 005508 326 LKTHSREKKLIDFREKLYLAPLTTVG---------NLPFRRVCKVLGADVTCGEMAMCTNLLQGQA-----------SEW 385 (693)
Q Consensus 326 ~~~~p~ekk~l~l~nrl~LAPMt~vt---------dlpFRrl~~~~Gadl~~TEMv~a~~L~~g~~-----------~e~ 385 (693)
.-|.|.+++++.|+||+++|||+++. +..+++++.+.|+++++|||+.+.+...+.. ..|
T Consensus 4 ~Lf~P~~ig~~~l~NRiv~aPm~~~~a~~~~g~~t~~~~~~y~~rA~~GLiite~~~v~~~g~~~~~~~gi~~d~~i~~~ 83 (365)
T 2gou_A 4 SLFQPITLGALTLKNRIVMPPMTRSRASQPGDVANHMMAIYYAQRASAGLIVSEGTQISPTAKGYAWTPGIYTPEQIAGW 83 (365)
T ss_dssp GGGSCEEETTEEESSSEEECCCCCCCCBTTTTBCCHHHHHHHHTTTTSSEEEEEEEESSGGGCCSTTCCBSSSHHHHHHH
T ss_pred CCCCCEEECCEEECCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEECCEEECCCCCCCCCCCCCCCHHHHHHH
T ss_conf 35999558999873820889977776668999879999999999854888998864505654578997765899999999
Q ss_pred HHH--HCCCCCCEEEEEECC------------------------------------------CCH------------HHH
Q ss_conf 533--026799919999058------------------------------------------889------------999
Q 005508 386 ALL--RRHSSEDLFGVQICG------------------------------------------AYP------------DTL 409 (693)
Q Consensus 386 ~ll--~~h~~e~pigvQL~G------------------------------------------~~p------------e~~ 409 (693)
+.+ ..|..+.++++||++ ..| ++|
T Consensus 84 ~~l~~~vh~~g~~i~~QL~H~Gr~~~~~~~~g~~~~apS~i~~~~~~~~~~~~~g~~~~~~~~~p~~mt~~eI~~~i~~f 163 (365)
T 2gou_A 84 RIVTEAVHAKGCAIFAQLWHVGRVTHPDNIDGQQPISSSTLKAENVKVFVDNGSDEPGFVDVAVPRAMTKADIAQVIADY 163 (365)
T ss_dssp HHHHHHHHHHSCEEEEEEECCTTSSCGGGTTTCCCEESSSCCCTTCEEEECCSSSSCEEEECCCCEECCHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 99999998469969998405877666334579985378776555654222333343344678888759999999999999
Q ss_pred HHHHHHHHHHCCCCEEEECCCC---------CCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCC-CCEEEEECC-CCC--
Q ss_conf 9999997651898699983889---------974311277430013793899999998406544-577998458-998--
Q 005508 410 ARTVELIDQQCTVDFIDINMGC---------PIDIVVNKGAGSCLLTKPMRMKGIIEATSGTVD-KPITIKVRT-GYF-- 476 (693)
Q Consensus 410 a~AAe~l~~~aG~D~IDLN~GC---------P~~~v~~~G~GsaLl~rp~~l~eIikai~~~v~-iPVTVKiR~-G~~-- 476 (693)
++||+++. ++|||+||||++| |..+.+.+.||++|++|++++.+||++|+++++ .||+|||+. +|.
T Consensus 164 ~~aA~~a~-~aGfDgVeih~a~gYLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~vg~~pv~vris~~~~~~~ 242 (365)
T 2gou_A 164 RQAALNAM-EAGFDGIELHAANGYLINQFIDSEANNRSDEYGGSLENRLRFLDEVVAALVDAIGAERVGVRLAPLTTLNG 242 (365)
T ss_dssp HHHHHHHH-HTTCSEEEEECCTTSHHHHHHSGGGCCCCSTTSSSHHHHTHHHHHHHHHHHHHHCGGGEEEEECSSCCTTS
T ss_pred HHHHHHHH-HCCCCEEEEECCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCC
T ss_conf 99999999-84999899806553357643698736767666756444478899999999987388847999756324577
Q ss_pred ----CCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHCCCCC
Q ss_conf ----9946899999999975987899963445686678764999999999829994499929878988799987139996
Q 005508 477 ----EGKNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPEL 552 (693)
Q Consensus 477 ----e~~~~a~~la~~L~e~GvdaItIHgRtr~qryt~~Adw~~I~~i~~~~~~~IPVIgNGdI~S~eDa~~~l~~~~ga 552 (693)
.+.+++.++++.|++.|+++|+||+++.... ....|++++.+++.+ ++|||+||+| +++++.++++. .+|
T Consensus 243 ~~~~~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~--~~~~~~~~~~i~~~~--~iPvi~~Ggi-~~~~a~~~l~~-g~a 316 (365)
T 2gou_A 243 TVDADPILTYTAAAALLNKHRIVYLHIAEVDWDDA--PDTPVSFKRALREAY--QGVLIYAGRY-NAEKAEQAIND-GLA 316 (365)
T ss_dssp CCCSSHHHHHHHHHHHHHHTTCSEEEEECCBTTBC--CCCCHHHHHHHHHHC--CSEEEEESSC-CHHHHHHHHHT-TSC
T ss_pred CCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCC--CCCCHHHHHHHHHHC--CCCEEEECCC-CHHHHHHHHHC-CCC
T ss_conf 78999999999999999983998999808976789--876499999999977--9968996998-99999999987-996
Q ss_pred CEEEECHHHHHCCCCHHHHHHCCCC
Q ss_conf 7897717876289703678740689
Q 005508 553 ASCMIARGALIKPWIFTEIKEQRHW 577 (693)
Q Consensus 553 DgVMIGRGaL~nPwiF~eIk~~~~~ 577 (693)
|+||+||++|.||||+.+++++..+
T Consensus 317 D~V~igR~~i~~P~l~~~~~~g~~l 341 (365)
T 2gou_A 317 DMIGFGRPFIANPDLPERLRHGYPL 341 (365)
T ss_dssp SEEECCHHHHHCTTHHHHHHHTCCC
T ss_pred CEEHHCHHHHHCCHHHHHHHCCCCC
T ss_conf 3632159988693699999729988
No 8
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=1.00 E-value=1 Score=287.78 Aligned_cols=245 Identities=12% Similarity=0.116 Sum_probs=204.5
Q ss_pred CCCCCCCCCCCCCCCCEEECCCCCCC---------CHHHHHHHH--HCCCCEEEECCCCCCHHCCCCH-----------H
Q ss_conf 77676444782116938875698979---------399999999--9099989916510000002882-----------3
Q 005508 326 LKTHSREKKLIDFREKLYLAPLTTVG---------NLPFRRVCK--VLGADVTCGEMAMCTNLLQGQA-----------S 383 (693)
Q Consensus 326 ~~~~p~ekk~l~l~nrl~LAPMt~vt---------dlpFRrl~~--~~Gadl~~TEMv~a~~L~~g~~-----------~ 383 (693)
.-|.|.+++++.|+||+++|||+++. +..++++.. +.|+++++|||+.+.+...+.. .
T Consensus 4 ~Lf~p~~ig~~~l~NRiv~aPm~~~~~~~~~g~~~~~~~~~y~~rA~gG~gliite~~~v~~~g~~~~~~~~i~~d~~~~ 83 (338)
T 1z41_A 4 KLFTPITIKDMTLKNRIVMSPMCMYSSHEKDGKLTPFHMAHYISRAIGQVGLIIVEASAVNPQGRITDQDLGIWSDEHIE 83 (338)
T ss_dssp GGGSCEEETTEEESSSEEECCCCCCCCTTSSSCCCHHHHHHHHHHHHTTCSEEEEEEEESSGGGCSSTTSCBCSSTHHHH
T ss_pred CCCCCEEECCEEECCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEECCEECCCCCCCCCCCCCCCCHHHHH
T ss_conf 25898538998875854889867776778999889999999999974798779968700365446789875357889999
Q ss_pred HHHHH--HCCCCCCEEEEEECCC-----------------------CH------------HHHHHHHHHHHHHCCCCEEE
Q ss_conf 44533--0267999199990588-----------------------89------------99999999976518986999
Q 005508 384 EWALL--RRHSSEDLFGVQICGA-----------------------YP------------DTLARTVELIDQQCTVDFID 426 (693)
Q Consensus 384 e~~ll--~~h~~e~pigvQL~G~-----------------------~p------------e~~a~AAe~l~~~aG~D~ID 426 (693)
.|+.+ ..|..+.++++||++. .| +.|++||+++. ++|||+||
T Consensus 84 ~~~~~~~~vh~~g~~i~~QL~h~Gr~~~~~~~~~~pS~~~~~~~~~~p~~mt~~eI~~~i~~~~~aA~~a~-~aGfDgVe 162 (338)
T 1z41_A 84 GFAKLTEQVKEQGSKIGIQLAHAGRKAELEGDIFAPSAIAFDEQSATPVEMSAEKVKETVQEFKQAAARAK-EAGFDVIE 162 (338)
T ss_dssp HHHHHHHHHHHTTCEEEEEEECCGGGCCCSSCCEESSSCCSSTTSCCCEECCHHHHHHHHHHHHHHHHHHH-HTTCSEEE
T ss_pred HHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH-HCCCCEEE
T ss_conf 99999999986699799973478756678898747888777778997864999999999999999999999-76999899
Q ss_pred ECCCC---------CCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEECC------CCCCCHHHHHHHHHHHHH
Q ss_conf 83889---------974311277430013793899999998406544577998458------998994689999999997
Q 005508 427 INMGC---------PIDIVVNKGAGSCLLTKPMRMKGIIEATSGTVDKPITIKVRT------GYFEGKNRIDSLIADIGT 491 (693)
Q Consensus 427 LN~GC---------P~~~v~~~G~GsaLl~rp~~l~eIikai~~~v~iPVTVKiR~------G~~e~~~~a~~la~~L~e 491 (693)
||++| |..+.+.+.||++|++|++++.+||++|++++++||+||++. || +.+++.++++.|++
T Consensus 163 ih~~~gyLl~qFlsp~~n~R~d~yGGslenr~r~~~eiv~avr~~v~~pv~vris~~~~~~~g~--~~~~~~~~a~~l~~ 240 (338)
T 1z41_A 163 IHAAHGYLIHEFLSPLSNHRTDEYGGSPENRYRFLREIIDEVKQVWDGPLFVRVSASDYTDKGL--DIADHIGFAKWMKE 240 (338)
T ss_dssp EEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHCCSCEEEEEECCCCSTTSC--CHHHHHHHHHHHHH
T ss_pred ECCCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCC--CHHHHHHHHHHHHH
T ss_conf 6054456888726987477676668565663899999999999873885799963764678998--99999999999998
Q ss_pred CCCCEEEEECCCCC-CC-CCCC-CCHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHCCCCCCEEEECHHHHHCCCCH
Q ss_conf 59878999634456-86-6787-649999999998299944999298789887999871399967897717876289703
Q 005508 492 WGASAVTVHGRTRQ-QR-YSKL-ADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMIARGALIKPWIF 568 (693)
Q Consensus 492 ~GvdaItIHgRtr~-qr-yt~~-Adw~~I~~i~~~~~~~IPVIgNGdI~S~eDa~~~l~~~~gaDgVMIGRGaL~nPwiF 568 (693)
.|+++|+||+++.. +. ..++ .+|+++.++++.+ ++|||+||+|.|++++.++++. .++|+||+||++|.||||+
T Consensus 241 ~Gvd~i~v~~~~~~~~~~~~~~~~~~~~~~~ir~~~--~iPVi~~Ggi~s~~~a~~~l~~-G~aD~V~iGR~~i~nPdl~ 317 (338)
T 1z41_A 241 QGVDLIDCSSGALVHADINVFPGYQVSFAEKIREQA--DMATGAVGMITDGSMAEEILQN-GRADLIFIGRELLRDPFFA 317 (338)
T ss_dssp TTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHH--CCEEEECSSCCSHHHHHHHHHT-TSCSEEEECHHHHHCTTHH
T ss_pred CCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHC--CCCEEEECCCCCHHHHHHHHHC-CCCEEEEECHHHHHCCHHH
T ss_conf 399889981686666777777421199999999977--9989997997999999999976-9944995258988691299
Q ss_pred HHHHHCCC
Q ss_conf 67874068
Q 005508 569 TEIKEQRH 576 (693)
Q Consensus 569 ~eIk~~~~ 576 (693)
.+++++..
T Consensus 318 ~ki~~~~~ 325 (338)
T 1z41_A 318 RTAAKQLN 325 (338)
T ss_dssp HHHHHHTT
T ss_pred HHHHCCCC
T ss_conf 99982787
No 9
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=1.00 E-value=1 Score=286.54 Aligned_cols=244 Identities=12% Similarity=0.073 Sum_probs=202.1
Q ss_pred CCCCCCCCCCCCCCCCEEECCCCCC-C-CHHH------HHHHHHCCCCEEEECCCCCCHHCCCCH------------HHH
Q ss_conf 7767644478211693887569897-9-3999------999999099989916510000002882------------344
Q 005508 326 LKTHSREKKLIDFREKLYLAPLTTV-G-NLPF------RRVCKVLGADVTCGEMAMCTNLLQGQA------------SEW 385 (693)
Q Consensus 326 ~~~~p~ekk~l~l~nrl~LAPMt~v-t-dlpF------Rrl~~~~Gadl~~TEMv~a~~L~~g~~------------~e~ 385 (693)
.-|.|.+++++.|+||+++|||++. + +.|. ++.+ +.|+++++|||+++.+...+.. ..|
T Consensus 8 ~Lf~p~~ig~~~l~NRiv~apm~~~~~~~~~~~~~~~y~~ra-~gG~Gliite~~~v~~~~~~~~~~~~~~~~~~~~~~~ 86 (729)
T 1o94_A 8 ILFEPIQIGPKTLRNRFYQVPHCIGAGSDKPGFQSAHRSVKA-EGGWAALNTEYCSINPESDDTHRLSARIWDEGDVRNL 86 (729)
T ss_dssp GGGSCEEETTEEESSSEEECCCCCSCTTTCHHHHHHHHHHHH-HTTCSEEEEEEEESSTTSCCTTSCCEECSSHHHHHHH
T ss_pred HCCCCEEECCEEECCCCEECCCCCCCCCCCCHHHHHHHHHHH-CCCCCEEEECCEEECCCCCCCCCCCCCCCCHHHHHHH
T ss_conf 349980389878888558898868767798489999999985-6899889983358447656788878764886786999
Q ss_pred HHH--HCCCCCCEEEEEECCC---------------------------C------------HHHHHHHHHHHHHHCCCCE
Q ss_conf 533--0267999199990588---------------------------8------------9999999999765189869
Q 005508 386 ALL--RRHSSEDLFGVQICGA---------------------------Y------------PDTLARTVELIDQQCTVDF 424 (693)
Q Consensus 386 ~ll--~~h~~e~pigvQL~G~---------------------------~------------pe~~a~AAe~l~~~aG~D~ 424 (693)
+.+ ..|..+.++++||++. . ++.|++||+++. ++|||+
T Consensus 87 ~~~~~~vh~~g~~i~~Ql~h~Gr~~~~~~~~~~~~~ps~~~~~~~~~~~p~~~t~~eI~~~i~~f~~aA~~a~-~aGfDg 165 (729)
T 1o94_A 87 KAMTDEVHKYGALAGVELWYGGAHAPNMESRATPRGPSQYASEFETLSYCKEMDLSDIAQVQQFYVDAAKRSR-DAGFDI 165 (729)
T ss_dssp HHHHHHHHTTTCEEEEEEECCGGGSCCTTTCCCCEESSCCBCSSSTTCBCEECCHHHHHHHHHHHHHHHHHHH-HTTCSE
T ss_pred HHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH-HCCCCE
T ss_conf 9999999857995999945777466654568987477766555567888870899999999999999999999-829998
Q ss_pred EEECCCC---------CCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCC--CCCEEEEECC-------CCCCCHHHHHHHH
Q ss_conf 9983889---------97431127743001379389999999840654--4577998458-------9989946899999
Q 005508 425 IDINMGC---------PIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV--DKPITIKVRT-------GYFEGKNRIDSLI 486 (693)
Q Consensus 425 IDLN~GC---------P~~~v~~~G~GsaLl~rp~~l~eIikai~~~v--~iPVTVKiR~-------G~~e~~~~a~~la 486 (693)
||||++| |..+.+.+.||++|++|++++.+||++|++++ ++||+||++. ||+. .+++.+++
T Consensus 166 VEih~a~gyLl~qFlsp~~N~R~D~yGGs~enR~r~~~eiv~avr~~vg~~~pv~vrls~~~~~~~~G~~~-~~~~~~~~ 244 (729)
T 1o94_A 166 VYVYGAHSYLPLQFLNPYYNKRTDKYGGSLENRARFWLETLEKVKHAVGSDCAIATRFGVDTVYGPGQIEA-EVDGQKFV 244 (729)
T ss_dssp EEEEECTTCHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHHTTTSEEEEEEEEECSSCTTSCCT-TTHHHHHH
T ss_pred EEECCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCC-HHHHHHHH
T ss_conf 99844556399984598658885767998788749999999999998499964999976545768899883-68999999
Q ss_pred HHHHHCCCCEEEEECCC--------CCCCCCCCC-CHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHCCCCCCEEEE
Q ss_conf 99997598789996344--------568667876-499999999982999449992987898879998713999678977
Q 005508 487 ADIGTWGASAVTVHGRT--------RQQRYSKLA-DWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMI 557 (693)
Q Consensus 487 ~~L~e~GvdaItIHgRt--------r~qryt~~A-dw~~I~~i~~~~~~~IPVIgNGdI~S~eDa~~~l~~~~gaDgVMI 557 (693)
+.|++ ++++|+||+++ ..+.|.+.+ +|+++.++++.+ ++|||+||+|.+++++.++++. +++|+||+
T Consensus 245 ~~l~~-~~d~~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~--~~pvi~~G~i~~~~~a~~~l~~-g~aD~V~~ 320 (729)
T 1o94_A 245 EMADS-LVDMWDITIGDIAEWGEDAGPSRFYQQGHTIPWVKLVKQVS--KKPVLGVGRYTDPEKMIEIVTK-GYADIIGC 320 (729)
T ss_dssp HHHGG-GCSEEEEEECCSTTGGGTSCCTTTCCTTTTHHHHHHHHTTC--SSCEECCSCCCCHHHHHHHHHT-TSCSBEEE
T ss_pred HHHHH-HCCEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHC--CCEEEEECCCCCHHHHHHHHHC-CCCCEEEE
T ss_conf 99984-56889883422545555668754567542489999999877--9789996999999999999977-99989994
Q ss_pred CHHHHHCCCCHHHHHHCCC
Q ss_conf 1787628970367874068
Q 005508 558 ARGALIKPWIFTEIKEQRH 576 (693)
Q Consensus 558 GRGaL~nPwiF~eIk~~~~ 576 (693)
||++|.||||+.++++++.
T Consensus 321 gR~~l~~P~~~~~~~~g~~ 339 (729)
T 1o94_A 321 ARPSIADPFLPQKVEQGRY 339 (729)
T ss_dssp SHHHHHCTTHHHHHHTTCG
T ss_pred CCHHHCCCHHHHHHHCCCC
T ss_conf 7631119469999972885
No 10
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=1.00 E-value=1 Score=281.58 Aligned_cols=245 Identities=13% Similarity=0.047 Sum_probs=203.1
Q ss_pred CCCCCCCCCCCCCCCCEEECCCCC-CCC--HHHHHHHHH------CCCCEEEECCCCCCHHCCCCH-----------HHH
Q ss_conf 776764447821169388756989-793--999999999------099989916510000002882-----------344
Q 005508 326 LKTHSREKKLIDFREKLYLAPLTT-VGN--LPFRRVCKV------LGADVTCGEMAMCTNLLQGQA-----------SEW 385 (693)
Q Consensus 326 ~~~~p~ekk~l~l~nrl~LAPMt~-vtd--lpFRrl~~~------~Gadl~~TEMv~a~~L~~g~~-----------~e~ 385 (693)
.-|.|.+++++.|+||+++|||++ .++ .++++++.. .|+++++|||+++.+...+.. ..|
T Consensus 4 ~lf~p~~ig~~~l~nRi~~apm~~~~~~~~~~~~~~~~~y~~ra~gg~gliite~~~v~~~~~~~~~~~~~~~~~~~~~~ 83 (671)
T 1ps9_A 4 SLFAPLDLGFTTLKNRVLMGSMHTGLEEYPDGAERLAAFYAERARHGVALIVSGGIAPDLTGVGMEGGAMLNDASQIPHH 83 (671)
T ss_dssp TTTCCEECSSCEESSSEEECCCCCSCTTSTTHHHHHHHHHHHHHHTTCSEEEEEEEBSSSTTCSBTTCCBCCSGGGHHHH
T ss_pred CCCCCEEECCEEECCCEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHH
T ss_conf 15998348998873831889846785789998599999999996489977996364127665678997766899999999
Q ss_pred HHH--HCCCCCCEEEEEECCC----------------------CH------------HHHHHHHHHHHHHCCCCEEEECC
Q ss_conf 533--0267999199990588----------------------89------------99999999976518986999838
Q 005508 386 ALL--RRHSSEDLFGVQICGA----------------------YP------------DTLARTVELIDQQCTVDFIDINM 429 (693)
Q Consensus 386 ~ll--~~h~~e~pigvQL~G~----------------------~p------------e~~a~AAe~l~~~aG~D~IDLN~ 429 (693)
+.+ ..|..+.++++||++. .| +.|++||+++. ++|||+||||+
T Consensus 84 ~~~~~~vh~~g~~i~~Ql~h~Gr~~~~~~~~~ps~~~~~~~~~~p~~~t~~ei~~~i~~~~~aA~~a~-~aGfd~veih~ 162 (671)
T 1ps9_A 84 RTITEAVHQEGGKIALQILHTGRYSYQPHLVAPSALQAPINRFVPHELSHEEILQLIDNFARCAQLAR-EAGYDGVEVMG 162 (671)
T ss_dssp HHHHHHHHHTTCCEEEEECCCGGGSBSTTCEESSSCCCTTCSSCCEECCHHHHHHHHHHHHHHHHHHH-HTTCSEEEEEE
T ss_pred HHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH-HCCCCEEEECC
T ss_conf 99999998669979999356775668998758887666668998861999999999999999999999-75998899822
Q ss_pred CC---------CCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCC--CCCEEEEECC------CCCCCHHHHHHHHHHHHHC
Q ss_conf 89---------97431127743001379389999999840654--4577998458------9989946899999999975
Q 005508 430 GC---------PIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV--DKPITIKVRT------GYFEGKNRIDSLIADIGTW 492 (693)
Q Consensus 430 GC---------P~~~v~~~G~GsaLl~rp~~l~eIikai~~~v--~iPVTVKiR~------G~~e~~~~a~~la~~L~e~ 492 (693)
|| |..+.+++.||++|++|++++.+|+++|++++ ++||+||++. || +.+++.++++.|+++
T Consensus 163 ~~gyl~~qFlsp~~n~r~d~yGgs~~~r~r~~~eiv~avr~~vG~~~~v~vrls~~~~~~~g~--~~~~~~~~a~~l~~~ 240 (671)
T 1ps9_A 163 SEGYLINEFLTLRTNQRSDQWGGDYRNRMRFAVEVVRAVRERVGNDFIIIYRLSMLDLVEDGG--TFAETVELAQAIEAA 240 (671)
T ss_dssp CBTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCSSSEEEEEEEEECCSTTCC--CHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCC--CHHHHHHHHHHHHHC
T ss_conf 332489973797657775867886798889999999999997299965999989655678998--999999999999865
Q ss_pred CCCEEEEECCCCCCC------CCCCC-CHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHCCCCCCEEEECHHHHHCC
Q ss_conf 987899963445686------67876-49999999998299944999298789887999871399967897717876289
Q 005508 493 GASAVTVHGRTRQQR------YSKLA-DWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMIARGALIKP 565 (693)
Q Consensus 493 GvdaItIHgRtr~qr------yt~~A-dw~~I~~i~~~~~~~IPVIgNGdI~S~eDa~~~l~~~~gaDgVMIGRGaL~nP 565 (693)
|+++|++|+++.+++ +.+.+ .+++++++++.+ ++|||++|+|++++++.++++. .++|+||+||++|.||
T Consensus 241 g~d~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~--~iPvi~~Ggi~~~~~a~~~l~~-g~aD~V~~gR~~l~~P 317 (671)
T 1ps9_A 241 GATIINTGIGWHEARIPTIATPVPRGAFSWVTRKLKGHV--SLPLVTTNRINDPQVADDILSR-GDADMVSMARPFLADA 317 (671)
T ss_dssp TCSEEEEEECBTTCSSCSSSTTSCTTTTHHHHHHHTTSC--SSCEEECSSCCSHHHHHHHHHT-TSCSEEEESTHHHHCT
T ss_pred CCCEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHC--CCEEEEECCCCCHHHHHHHHHC-CCCCEEEECHHHHHCC
T ss_conf 987997678866666665566677302799999999746--9459996998999999999975-9988898677777392
Q ss_pred CCHHHHHHCCC
Q ss_conf 70367874068
Q 005508 566 WIFTEIKEQRH 576 (693)
Q Consensus 566 wiF~eIk~~~~ 576 (693)
||+.++++++.
T Consensus 318 ~l~~k~~~g~~ 328 (671)
T 1ps9_A 318 ELLSKAQSGRA 328 (671)
T ss_dssp THHHHHHTTCG
T ss_pred HHHHHHHCCCC
T ss_conf 89999971788
Done!