BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 005511
(693 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|356516495|ref|XP_003526929.1| PREDICTED: chaperone protein ClpC, chloroplastic-like [Glycine max]
Length = 922
Score = 1341 bits (3470), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 661/692 (95%), Positives = 677/692 (97%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
MVGES ++V A VG GSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERV QILGR
Sbjct: 231 MVGESADSVTATVGSGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVTQILGR 290
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNPCLIGEPGVGKTAIAEGLAQRIA+GDVP+TIEGKKVITLDMGLLVAGTKYRGEFE
Sbjct: 291 RTKNNPCLIGEPGVGKTAIAEGLAQRIANGDVPETIEGKKVITLDMGLLVAGTKYRGEFE 350
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTLD
Sbjct: 351 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLD 410
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRKHIEKDPALERRFQPVKVPEP+VDETIQILKGLRERYEIHHKLRYTDEALV+AAQLS
Sbjct: 411 EYRKHIEKDPALERRFQPVKVPEPTVDETIQILKGLRERYEIHHKLRYTDEALVAAAQLS 470
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
YQYISDRFLPDKAIDLIDEAGSRVRL+HAQLPEEAREL+KE+RQI KEK EAVR QDFEK
Sbjct: 471 YQYISDRFLPDKAIDLIDEAGSRVRLQHAQLPEEARELDKEVRQIIKEKEEAVRNQDFEK 530
Query: 301 AGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVS 360
AGELRDREMDLKAQIS LV+KGKEMSKAETEAGD GP+VTE DIQHIVS+WTGIPVEKVS
Sbjct: 531 AGELRDREMDLKAQISTLVEKGKEMSKAETEAGDEGPIVTEADIQHIVSSWTGIPVEKVS 590
Query: 361 TDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 420
TDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS
Sbjct: 591 TDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 650
Query: 421 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 480
ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT
Sbjct: 651 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 710
Query: 481 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI 540
VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR+I
Sbjct: 711 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRKI 770
Query: 541 GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 600
GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE
Sbjct: 771 GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 830
Query: 601 VFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEG 660
VFDRLK KDIELQVTERFR+RVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEG
Sbjct: 831 VFDRLKVKDIELQVTERFRDRVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEG 890
Query: 661 DSVIVDVDSDGNVTVLNGSSGAPESLADPLPV 692
DSVIVDVDSDGNV VLNGSSGAPESL + LPV
Sbjct: 891 DSVIVDVDSDGNVIVLNGSSGAPESLPETLPV 922
>gi|356508861|ref|XP_003523172.1| PREDICTED: chaperone protein ClpC, chloroplastic-like isoform 1
[Glycine max]
gi|356508863|ref|XP_003523173.1| PREDICTED: chaperone protein ClpC, chloroplastic-like isoform 2
[Glycine max]
Length = 922
Score = 1338 bits (3464), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 659/692 (95%), Positives = 676/692 (97%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
MVGES ++V A VG GSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERV QILGR
Sbjct: 231 MVGESADSVTATVGSGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVTQILGR 290
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNPCLIGEPGVGKTAIAEGLAQRIA+GDVP+TIEGKKVITLDMGLLVAGTKYRGEFE
Sbjct: 291 RTKNNPCLIGEPGVGKTAIAEGLAQRIANGDVPETIEGKKVITLDMGLLVAGTKYRGEFE 350
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTLD
Sbjct: 351 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLD 410
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRKHIEKDPALERRFQPVKVPEP+VDETIQILKGLRERYEIHHKLRYTDEALV+AAQLS
Sbjct: 411 EYRKHIEKDPALERRFQPVKVPEPTVDETIQILKGLRERYEIHHKLRYTDEALVAAAQLS 470
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
YQYISDRFLPDKAIDLIDEAGSRVRL+HAQLPEEAREL+KE+RQI KEK EAVR QDFEK
Sbjct: 471 YQYISDRFLPDKAIDLIDEAGSRVRLQHAQLPEEARELDKEVRQIIKEKEEAVRNQDFEK 530
Query: 301 AGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVS 360
AGELRDREMDLKAQIS LV+KGKEMSKAE+EAGD PVVTE DIQHIVS+WTGIPVEKVS
Sbjct: 531 AGELRDREMDLKAQISTLVEKGKEMSKAESEAGDASPVVTEADIQHIVSSWTGIPVEKVS 590
Query: 361 TDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 420
TDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS
Sbjct: 591 TDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 650
Query: 421 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 480
ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT
Sbjct: 651 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 710
Query: 481 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI 540
VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR+I
Sbjct: 711 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRKI 770
Query: 541 GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 600
GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE
Sbjct: 771 GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 830
Query: 601 VFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEG 660
VF+RLK KDIELQVTERFR+RVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEG
Sbjct: 831 VFERLKVKDIELQVTERFRDRVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEG 890
Query: 661 DSVIVDVDSDGNVTVLNGSSGAPESLADPLPV 692
DSVIVDVDSDGNV VLNGSSGAPESL + LPV
Sbjct: 891 DSVIVDVDSDGNVIVLNGSSGAPESLPEALPV 922
>gi|255540075|ref|XP_002511102.1| ATP-dependent clp protease, putative [Ricinus communis]
gi|223550217|gb|EEF51704.1| ATP-dependent clp protease, putative [Ricinus communis]
Length = 924
Score = 1335 bits (3456), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 660/693 (95%), Positives = 676/693 (97%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
MVGESTE + A VG G NKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERV+QILGR
Sbjct: 232 MVGESTENIPAPVGPGGGSNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVIQILGR 291
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVP+TIE KKVITLDMGLLVAGTKYRGEFE
Sbjct: 292 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPETIERKKVITLDMGLLVAGTKYRGEFE 351
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTLD
Sbjct: 352 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLD 411
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALV+AAQLS
Sbjct: 412 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVAAAQLS 471
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
YQYISDRFLPDKAIDLIDEAGSRVRLRHAQ+PEEARELEKE+RQITKEK+EAVR QDFEK
Sbjct: 472 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQVPEEARELEKEVRQITKEKDEAVRSQDFEK 531
Query: 301 AGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVS 360
AGELRDREMDL+AQI+A+V+KGKEMSKAETEAGDVGP+V E DIQHIVS+WTGIPVEKVS
Sbjct: 532 AGELRDREMDLRAQIAAIVEKGKEMSKAETEAGDVGPLVNESDIQHIVSSWTGIPVEKVS 591
Query: 361 TDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 420
TDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS
Sbjct: 592 TDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 651
Query: 421 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 480
ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT
Sbjct: 652 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 711
Query: 481 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI 540
VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI
Sbjct: 712 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI 771
Query: 541 GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 600
GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE
Sbjct: 772 GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 831
Query: 601 VFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEG 660
VFDRLK KDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLA EIKEG
Sbjct: 832 VFDRLKVKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAGEIKEG 891
Query: 661 DSVIVDVDSDGNVTVLNGSSGAPESLADPLPVV 693
DSVIVDVDSDGNV VLNGSSG+PE+L D L VV
Sbjct: 892 DSVIVDVDSDGNVIVLNGSSGSPEALPDVLSVV 924
>gi|307136002|gb|ADN33858.1| ATP-dependent clp protease [Cucumis melo subsp. melo]
Length = 929
Score = 1335 bits (3456), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 672/692 (97%), Positives = 685/692 (98%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQ QIERV QILGR
Sbjct: 238 MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQQQIERVTQILGR 297
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNPCLIGEPGVGKTAIAEGLAQRIA+GDVP+TIEGKKVITLDMGLLVAGTKYRGEFE
Sbjct: 298 RTKNNPCLIGEPGVGKTAIAEGLAQRIANGDVPETIEGKKVITLDMGLLVAGTKYRGEFE 357
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTLD
Sbjct: 358 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLD 417
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALV+AAQLS
Sbjct: 418 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVAAAQLS 477
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
YQYISDRFLPDKAIDL+DEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVR QDFEK
Sbjct: 478 YQYISDRFLPDKAIDLVDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRSQDFEK 537
Query: 301 AGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVS 360
AGELRDREM+LK +ISALVDKGKEMSKAE+EAGDVGPVVTEVDIQHIVS+WTGIPVEKVS
Sbjct: 538 AGELRDREMELKTKISALVDKGKEMSKAESEAGDVGPVVTEVDIQHIVSSWTGIPVEKVS 597
Query: 361 TDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 420
TDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS
Sbjct: 598 TDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 657
Query: 421 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 480
ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT
Sbjct: 658 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 717
Query: 481 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI 540
VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI
Sbjct: 718 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI 777
Query: 541 GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 600
GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE
Sbjct: 778 GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 837
Query: 601 VFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEG 660
VFDRLK K+I+LQVTERFR+RVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEG
Sbjct: 838 VFDRLKAKEIDLQVTERFRDRVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEG 897
Query: 661 DSVIVDVDSDGNVTVLNGSSGAPESLADPLPV 692
DSVIVDVDSDGNVTVLNGSSGAPESL D +PV
Sbjct: 898 DSVIVDVDSDGNVTVLNGSSGAPESLPDAIPV 929
>gi|449440498|ref|XP_004138021.1| PREDICTED: chaperone protein ClpC, chloroplastic-like [Cucumis
sativus]
Length = 929
Score = 1334 bits (3452), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 670/692 (96%), Positives = 685/692 (98%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQ QIERV QILGR
Sbjct: 238 MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQQQIERVTQILGR 297
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNPCLIGEPGVGKTAIAEGLAQRIA+GDVP+TIEGKKVITLDMGLLVAGTKYRGEFE
Sbjct: 298 RTKNNPCLIGEPGVGKTAIAEGLAQRIANGDVPETIEGKKVITLDMGLLVAGTKYRGEFE 357
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTLD
Sbjct: 358 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLD 417
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALV+AAQLS
Sbjct: 418 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVAAAQLS 477
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
YQYISDRFLPDKAIDL+DEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVR QDFEK
Sbjct: 478 YQYISDRFLPDKAIDLVDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRSQDFEK 537
Query: 301 AGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVS 360
AGELRDREM+LK +ISALVDKGKEMSKAE+EAGDVGPVVTEVDIQHIVS+WTGIPVEKVS
Sbjct: 538 AGELRDREMELKTKISALVDKGKEMSKAESEAGDVGPVVTEVDIQHIVSSWTGIPVEKVS 597
Query: 361 TDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 420
TDESDRLLKMEETLHKRVIGQDEAV+AISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS
Sbjct: 598 TDESDRLLKMEETLHKRVIGQDEAVQAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 657
Query: 421 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 480
ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT
Sbjct: 658 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 717
Query: 481 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI 540
VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR+
Sbjct: 718 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRM 777
Query: 541 GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 600
GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE
Sbjct: 778 GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 837
Query: 601 VFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEG 660
VFDRLK K+I+LQVTERFR+RVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEG
Sbjct: 838 VFDRLKAKEIDLQVTERFRDRVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEG 897
Query: 661 DSVIVDVDSDGNVTVLNGSSGAPESLADPLPV 692
DSVIVDVDSDGNVTVLNGSSGAPESL D +PV
Sbjct: 898 DSVIVDVDSDGNVTVLNGSSGAPESLPDAIPV 929
>gi|225456471|ref|XP_002284518.1| PREDICTED: ATP-dependent Clp protease ATP-binding subunit clpA
homolog CD4A, chloroplastic-like [Vitis vinifera]
Length = 923
Score = 1329 bits (3439), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 668/693 (96%), Positives = 685/693 (98%), Gaps = 1/693 (0%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
MVGESTEAVGAGVGGG++GNKMPTLEEYGTNLTKLAEEGKLDPVVGRQ QIERV QILGR
Sbjct: 231 MVGESTEAVGAGVGGGTTGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQQQIERVTQILGR 290
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNPCLIGEPGVGKTAIAEGLAQRIA+GDVP+TIEGKKVITLDMGLLVAGTKYRGEFE
Sbjct: 291 RTKNNPCLIGEPGVGKTAIAEGLAQRIANGDVPETIEGKKVITLDMGLLVAGTKYRGEFE 350
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTLD
Sbjct: 351 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLD 410
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAA+LS
Sbjct: 411 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAARLS 470
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVR QDFEK
Sbjct: 471 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRSQDFEK 530
Query: 301 AGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVS 360
AGELRDREMDLKAQIS L+DKGKEM+KAETEAGD+GP+VTEVDIQHIVSAWTGIPVEKVS
Sbjct: 531 AGELRDREMDLKAQISTLIDKGKEMTKAETEAGDIGPMVTEVDIQHIVSAWTGIPVEKVS 590
Query: 361 TDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 420
TDESDRLLKMEETLH+RVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS
Sbjct: 591 TDESDRLLKMEETLHRRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 650
Query: 421 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 480
ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT
Sbjct: 651 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 710
Query: 481 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI 540
VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI
Sbjct: 711 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI 770
Query: 541 GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 600
GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVK+IADIMLKE
Sbjct: 771 GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKDIADIMLKE 830
Query: 601 VFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEG 660
VF+RLK KDIELQVTERFR+RVV+EGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEG
Sbjct: 831 VFERLKAKDIELQVTERFRDRVVDEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEG 890
Query: 661 DSVIVDVDSDGNVTVLNGSSGA-PESLADPLPV 692
DSVIVDVDSDGNVTVLNGSSGA PESL + +PV
Sbjct: 891 DSVIVDVDSDGNVTVLNGSSGAPPESLPEAMPV 923
>gi|449470390|ref|XP_004152900.1| PREDICTED: chaperone protein ClpC, chloroplastic-like [Cucumis
sativus]
gi|449505877|ref|XP_004162592.1| PREDICTED: chaperone protein ClpC, chloroplastic-like [Cucumis
sativus]
Length = 924
Score = 1326 bits (3431), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 668/693 (96%), Positives = 687/693 (99%), Gaps = 1/693 (0%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERV QILGR
Sbjct: 232 MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVTQILGR 291
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNPCLIGEPGVGKTAIAEGLAQRIA+GDVP+TIEGKKVITLDMGLLVAGTKYRGEFE
Sbjct: 292 RTKNNPCLIGEPGVGKTAIAEGLAQRIANGDVPETIEGKKVITLDMGLLVAGTKYRGEFE 351
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTLD
Sbjct: 352 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLD 411
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEAL +AAQLS
Sbjct: 412 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALEAAAQLS 471
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEA+E+EKELRQITKEKN+AVR QDFEK
Sbjct: 472 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEAKEVEKELRQITKEKNDAVRSQDFEK 531
Query: 301 AGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVS 360
AGELRDREM+LKA+ISAL+DKGKEMSKAE+EAGDVGPVVTEVDIQHIVS+WTGIPVEKVS
Sbjct: 532 AGELRDREMELKAKISALIDKGKEMSKAESEAGDVGPVVTEVDIQHIVSSWTGIPVEKVS 591
Query: 361 TDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 420
TDESDRLLKMEETLH+RVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS
Sbjct: 592 TDESDRLLKMEETLHRRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 651
Query: 421 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 480
ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT
Sbjct: 652 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 711
Query: 481 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI 540
VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR+
Sbjct: 712 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRM 771
Query: 541 GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 600
GFDLDYDEKDSSY RIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE
Sbjct: 772 GFDLDYDEKDSSYTRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 831
Query: 601 VFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEG 660
VFDRLK K+I+LQVTERFR+RVV+EGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEG
Sbjct: 832 VFDRLKGKEIDLQVTERFRDRVVDEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEG 891
Query: 661 DSVIVDVDSDGNVTVLNGSSG-APESLADPLPV 692
DSVIVDVDSDGNVTVLNGSSG APESLADP+PV
Sbjct: 892 DSVIVDVDSDGNVTVLNGSSGAAPESLADPIPV 924
>gi|147866973|emb|CAN78847.1| hypothetical protein VITISV_010724 [Vitis vinifera]
Length = 890
Score = 1318 bits (3410), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 650/674 (96%), Positives = 665/674 (98%), Gaps = 1/674 (0%)
Query: 20 NKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAI 79
NKMPTLEEYGTNLTKLAEEGKLDPVVGRQ QIERV QILGRRTKNNPCLIGEPGVGKTAI
Sbjct: 217 NKMPTLEEYGTNLTKLAEEGKLDPVVGRQQQIERVTQILGRRTKNNPCLIGEPGVGKTAI 276
Query: 80 AEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILF 139
AEGLAQRIA+GDVP+TIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILF
Sbjct: 277 AEGLAQRIANGDVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILF 336
Query: 140 IDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPV 199
IDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTLDEYRKHIEKDPALERRFQPV
Sbjct: 337 IDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPV 396
Query: 200 KVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDE 259
KVPEPSVDETIQI KGLRERYEIHHKLRYTDEALVSAA+LSYQYISDRFLPDKAIDLIDE
Sbjct: 397 KVPEPSVDETIQIXKGLRERYEIHHKLRYTDEALVSAARLSYQYISDRFLPDKAIDLIDE 456
Query: 260 AGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALV 319
AGSRVRLRHAQLPEEARELEKELRQITKEKNEAVR QDFEKAGELRDREMDLKAQIS L+
Sbjct: 457 AGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRSQDFEKAGELRDREMDLKAQISTLI 516
Query: 320 DKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVI 379
DKGKEM+KAETEAGD+GP+VTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLH+RVI
Sbjct: 517 DKGKEMTKAETEAGDIGPMVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHRRVI 576
Query: 380 GQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIR 439
GQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIR
Sbjct: 577 GQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIR 636
Query: 440 LDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMML 499
LDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMML
Sbjct: 637 LDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMML 696
Query: 500 QILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSL 559
QILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSL
Sbjct: 697 QILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSL 756
Query: 560 VTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFR 619
VTEELKQYFRPEFLNRLDEMIVFRQLTKLEVK+IADIMLKEVF+RLK KDIELQVTERFR
Sbjct: 757 VTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKDIADIMLKEVFERLKAKDIELQVTERFR 816
Query: 620 ERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNGS 679
+RVV+EGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNGS
Sbjct: 817 DRVVDEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNGS 876
Query: 680 SGA-PESLADPLPV 692
SGA PESL + +PV
Sbjct: 877 SGAPPESLPEAMPV 890
>gi|356513459|ref|XP_003525431.1| PREDICTED: chaperone protein ClpC, chloroplastic-like [Glycine max]
Length = 919
Score = 1317 bits (3408), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 651/693 (93%), Positives = 674/693 (97%), Gaps = 1/693 (0%)
Query: 1 MVGESTEAVGAGVGGGSSGN-KMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 59
MVGE ++VGA VG GSS N KMPTLEEYGTNLTKLAEEGKLDPVVGRQ QIERV QILG
Sbjct: 227 MVGEGADSVGATVGPGSSNNNKMPTLEEYGTNLTKLAEEGKLDPVVGRQQQIERVTQILG 286
Query: 60 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 119
RRTKNNPCLIGEPGVGKTAIAEGLAQRIA+GDVP+TIEGKKVITLDMGLLVAGTKYRGEF
Sbjct: 287 RRTKNNPCLIGEPGVGKTAIAEGLAQRIANGDVPETIEGKKVITLDMGLLVAGTKYRGEF 346
Query: 120 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 179
EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTL
Sbjct: 347 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTL 406
Query: 180 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 239
DEYRKHIEKDPALERRFQPVKVPEP+VDETIQILKGLRERYEIHHKLRYTD+ALV+AAQL
Sbjct: 407 DEYRKHIEKDPALERRFQPVKVPEPTVDETIQILKGLRERYEIHHKLRYTDDALVAAAQL 466
Query: 240 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 299
S+QYISDRFLPDKAIDLIDEAGSRVRL+HAQLPEEAREL+KE+RQI KEK E VR QDFE
Sbjct: 467 SHQYISDRFLPDKAIDLIDEAGSRVRLQHAQLPEEARELDKEVRQIVKEKEEFVRNQDFE 526
Query: 300 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 359
KAGELRDREMDLKAQISAL++KGKEMSKAE+EAGD GP+VTEVDIQHIVS+WTGIPVEKV
Sbjct: 527 KAGELRDREMDLKAQISALIEKGKEMSKAESEAGDEGPMVTEVDIQHIVSSWTGIPVEKV 586
Query: 360 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 419
STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK
Sbjct: 587 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 646
Query: 420 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 479
SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY
Sbjct: 647 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 706
Query: 480 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 539
TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR+
Sbjct: 707 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRK 766
Query: 540 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 599
IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK
Sbjct: 767 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 826
Query: 600 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 659
EVFDRLK K+I+L VTERFRERVV+EGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE
Sbjct: 827 EVFDRLKAKEIDLSVTERFRERVVDEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 886
Query: 660 GDSVIVDVDSDGNVTVLNGSSGAPESLADPLPV 692
GDSVIVD DSDGNV VLNGSSGAP+SL + LPV
Sbjct: 887 GDSVIVDADSDGNVIVLNGSSGAPDSLEEALPV 919
>gi|399212|sp|P31541.1|CLPAA_SOLLC RecName: Full=ATP-dependent Clp protease ATP-binding subunit clpA
homolog CD4A, chloroplastic; Flags: Precursor
gi|170433|gb|AAA34160.1| ATP-dependent protease (CD4A) [Solanum lycopersicum]
Length = 926
Score = 1315 bits (3402), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 651/694 (93%), Positives = 672/694 (96%), Gaps = 2/694 (0%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
MVGES+EAVGA VGGG+SG KMPTLEEYGTNLTKLAEEGKLDPVVGRQ QIERV QILGR
Sbjct: 233 MVGESSEAVGASVGGGTSGLKMPTLEEYGTNLTKLAEEGKLDPVVGRQAQIERVTQILGR 292
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNPCLIGEPGVGKTAIAEGLAQRIA+GDVP+TIEGKKVITLDMGLLVAGTKYRGEFE
Sbjct: 293 RTKNNPCLIGEPGVGKTAIAEGLAQRIANGDVPETIEGKKVITLDMGLLVAGTKYRGEFE 352
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTLD
Sbjct: 353 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLD 412
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKL YTDEA+ +AA+LS
Sbjct: 413 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLHYTDEAIEAAAKLS 472
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
+QYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK
Sbjct: 473 HQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 532
Query: 301 AGELRDREMDLKAQISALVDKGKEMSKAETEAGDV-GPVVTEVDIQHIVSAWTGIPVEKV 359
AGELRDREMDLKAQISAL+DK KE SKAE+EAGD GP+VTE DIQHIVS+WTGIPVEKV
Sbjct: 533 AGELRDREMDLKAQISALIDKNKEKSKAESEAGDAAGPIVTEADIQHIVSSWTGIPVEKV 592
Query: 360 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 419
STDESDRLLKMEETLH RVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK
Sbjct: 593 STDESDRLLKMEETLHTRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 652
Query: 420 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 479
SELAK+LA YYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY
Sbjct: 653 SELAKSLATYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 712
Query: 480 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 539
TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR
Sbjct: 713 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 772
Query: 540 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 599
IGFDLD+DEKDSSYNRIKSLVTEELKQYFRPEFLNRL EMIVFRQLTKLEVKEIADIMLK
Sbjct: 773 IGFDLDFDEKDSSYNRIKSLVTEELKQYFRPEFLNRLSEMIVFRQLTKLEVKEIADIMLK 832
Query: 600 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 659
EVF RLK K+IELQVTERFR+RVV+EGYNPSYGARPLRRAIMRLLEDSMAEKMLA EIKE
Sbjct: 833 EVFVRLKNKEIELQVTERFRDRVVDEGYNPSYGARPLRRAIMRLLEDSMAEKMLAGEIKE 892
Query: 660 GDSVIVDVDSDGNVTVLNGSSGAPESLADPLPVV 693
GDSVIVDVDSDGNVTVLNG+SGAP A P P++
Sbjct: 893 GDSVIVDVDSDGNVTVLNGTSGAPSDSA-PEPIL 925
>gi|18423214|ref|NP_568746.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Arabidopsis
thaliana]
gi|75170759|sp|Q9FI56.1|CLPC1_ARATH RecName: Full=Chaperone protein ClpC1, chloroplastic; AltName:
Full=ATP-dependent Clp protease ATP-binding subunit ClpC
homolog 1; AltName: Full=Casein lytic proteinase C1;
AltName: Full=Protein DE-REGULATED CAO ACCUMULATION 1;
AltName: Full=Protein IRON-RESCUED MUTANT 1; Flags:
Precursor
gi|9758239|dbj|BAB08738.1| ATP-dependent Clp protease, ATP-binding subunit [Arabidopsis
thaliana]
gi|20856956|gb|AAM26692.1| AT5g50920/K3K7_7 [Arabidopsis thaliana]
gi|110742601|dbj|BAE99213.1| ATP-dependent Clp protease [Arabidopsis thaliana]
gi|332008628|gb|AED96011.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Arabidopsis
thaliana]
Length = 929
Score = 1313 bits (3399), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 648/696 (93%), Positives = 674/696 (96%), Gaps = 5/696 (0%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
MVGE+ E V A VGGGSS NKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR
Sbjct: 234 MVGENNE-VTANVGGGSSSNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 292
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVP+TIEGKKVITLDMGLLVAGTKYRGEFE
Sbjct: 293 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPETIEGKKVITLDMGLLVAGTKYRGEFE 352
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
ERLKKLMEEI+QSDEIILFIDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTLD
Sbjct: 353 ERLKKLMEEIRQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLD 412
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRKHIEKDPALERRFQPVKVPEP+VDETIQILKGLRERYEIHHKLRYTDE+LV+AAQLS
Sbjct: 413 EYRKHIEKDPALERRFQPVKVPEPTVDETIQILKGLRERYEIHHKLRYTDESLVAAAQLS 472
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
YQYISDRFLPDKAIDLIDEAGSRVRLRHAQ+PEEARELEKELRQITKEKNEAVRGQDFEK
Sbjct: 473 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQVPEEARELEKELRQITKEKNEAVRGQDFEK 532
Query: 301 AGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVS 360
AG LRDRE++L+A++SA+ KGKEMSKAE+E G+ GP+VTE DIQHIVS+WTGIPVEKVS
Sbjct: 533 AGTLRDREIELRAEVSAIQAKGKEMSKAESETGEEGPMVTESDIQHIVSSWTGIPVEKVS 592
Query: 361 TDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 420
TDESDRLLKMEETLHKR+IGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS
Sbjct: 593 TDESDRLLKMEETLHKRIIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 652
Query: 421 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 480
ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT
Sbjct: 653 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 712
Query: 481 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI 540
VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI
Sbjct: 713 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI 772
Query: 541 GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 600
GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADI+LKE
Sbjct: 773 GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADILLKE 832
Query: 601 VFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEG 660
VF+RLK K+IELQVTERF+ERVV+EGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEG
Sbjct: 833 VFERLKKKEIELQVTERFKERVVDEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEG 892
Query: 661 DSVIVDVDSDGNVTVLNGSSGAP----ESLADPLPV 692
DSVIVDVD++GNVTVLNG SG P E D LPV
Sbjct: 893 DSVIVDVDAEGNVTVLNGGSGTPTTSLEEQEDSLPV 928
>gi|297795893|ref|XP_002865831.1| heat shock protein 93-V [Arabidopsis lyrata subsp. lyrata]
gi|297311666|gb|EFH42090.1| heat shock protein 93-V [Arabidopsis lyrata subsp. lyrata]
Length = 929
Score = 1311 bits (3392), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 647/696 (92%), Positives = 674/696 (96%), Gaps = 5/696 (0%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
MVGE+ E V A VGGGSS NKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR
Sbjct: 234 MVGENNE-VTANVGGGSSSNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 292
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVP+TIEGKKVITLDMGLLVAGTKYRGEFE
Sbjct: 293 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPETIEGKKVITLDMGLLVAGTKYRGEFE 352
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
ERLKKLMEEI+QSDEIILFIDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTLD
Sbjct: 353 ERLKKLMEEIRQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLD 412
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRKHIEKDPALERRFQPVKVPEP+VDETIQILKGLRERYEIHHKLRYTD++LV+AAQLS
Sbjct: 413 EYRKHIEKDPALERRFQPVKVPEPTVDETIQILKGLRERYEIHHKLRYTDDSLVAAAQLS 472
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
YQYISDRFLPDKAIDLIDEAGSRVRLRHAQ+PEEARELEKELRQITKEKNEAVRGQDFEK
Sbjct: 473 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQVPEEARELEKELRQITKEKNEAVRGQDFEK 532
Query: 301 AGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVS 360
AG LRDRE++L+A++SA+ KGKEMSKAE+E G+ GP+VTE DIQHIVS+WTGIPVEKVS
Sbjct: 533 AGTLRDREIELRAEVSAIQAKGKEMSKAESETGEEGPMVTESDIQHIVSSWTGIPVEKVS 592
Query: 361 TDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 420
TDESDRLLKMEETLHKR+IGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS
Sbjct: 593 TDESDRLLKMEETLHKRIIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 652
Query: 421 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 480
ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT
Sbjct: 653 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 712
Query: 481 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI 540
VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI
Sbjct: 713 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI 772
Query: 541 GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 600
GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADI+LKE
Sbjct: 773 GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADILLKE 832
Query: 601 VFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEG 660
VF+RLK K+IELQVTERF+ERVV+EGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEG
Sbjct: 833 VFERLKKKEIELQVTERFKERVVDEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEG 892
Query: 661 DSVIVDVDSDGNVTVLNGSSGAP----ESLADPLPV 692
DSVIVDVD++GNVTVLNG SG P E D LPV
Sbjct: 893 DSVIVDVDAEGNVTVLNGGSGTPTTSLEEQEDSLPV 928
>gi|399213|sp|P31542.1|CLPAB_SOLLC RecName: Full=ATP-dependent Clp protease ATP-binding subunit clpA
homolog CD4B, chloroplastic; Flags: Precursor
gi|170435|gb|AAA34161.1| ATP-dependent protease (CD4B) [Solanum lycopersicum]
Length = 923
Score = 1310 bits (3391), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 655/693 (94%), Positives = 675/693 (97%), Gaps = 1/693 (0%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
MVGES EAVGA VGGG+SG KMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERV QILGR
Sbjct: 231 MVGESNEAVGASVGGGTSGQKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVTQILGR 290
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNPCLIGEPGVGKTAIAEGLAQRIA+GDVP+TIEGKKVITLDMGLLVAGTKYRGEFE
Sbjct: 291 RTKNNPCLIGEPGVGKTAIAEGLAQRIANGDVPETIEGKKVITLDMGLLVAGTKYRGEFE 350
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTLD
Sbjct: 351 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLD 410
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRKHIEKDPALERRFQPVKVPEP+VDETIQILKGLRERYEIHHKLRYTDE LV+AAQLS
Sbjct: 411 EYRKHIEKDPALERRFQPVKVPEPTVDETIQILKGLRERYEIHHKLRYTDEDLVAAAQLS 470
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEA+ELEKELRQITKEKNEAVRGQDFEK
Sbjct: 471 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEAKELEKELRQITKEKNEAVRGQDFEK 530
Query: 301 AGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVS 360
AGELRDREMDLKAQI+AL+DK KE+SKAE+EA D GP+VTE DIQHIVS+WTGIPVEKVS
Sbjct: 531 AGELRDREMDLKAQITALIDKNKEVSKAESEAADTGPLVTEADIQHIVSSWTGIPVEKVS 590
Query: 361 TDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 420
TDESDRLLKMEETLH R+IGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS
Sbjct: 591 TDESDRLLKMEETLHTRIIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 650
Query: 421 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 480
ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT
Sbjct: 651 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 710
Query: 481 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI 540
VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI
Sbjct: 711 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI 770
Query: 541 GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 600
GFDLD DEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE
Sbjct: 771 GFDLDLDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 830
Query: 601 VFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEG 660
VF+RLK K+IELQVTERFR+RVV+EGYNPSYGARPLRRAIMRLLEDSMAEKMLA EIKEG
Sbjct: 831 VFERLKVKEIELQVTERFRDRVVDEGYNPSYGARPLRRAIMRLLEDSMAEKMLANEIKEG 890
Query: 661 DSVIVDVDSDGNVTVLNGSSGAPESLA-DPLPV 692
DSVIVDVDSDGNVTVLNGSSG P A +P+PV
Sbjct: 891 DSVIVDVDSDGNVTVLNGSSGTPSDPAPEPIPV 923
>gi|118488171|gb|ABK95905.1| unknown [Populus trichocarpa]
Length = 835
Score = 1309 bits (3388), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 646/694 (93%), Positives = 678/694 (97%), Gaps = 2/694 (0%)
Query: 1 MVGESTEAV-GAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 59
MVGESTE + G+ VG GSS NKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERV+QILG
Sbjct: 141 MVGESTENLAGSTVGPGSSNNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVIQILG 200
Query: 60 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 119
RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVP+TIEGKKVITLDMGLLVAGTKYRGEF
Sbjct: 201 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPETIEGKKVITLDMGLLVAGTKYRGEF 260
Query: 120 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 179
EERLKKLMEEIKQSDEI+LFIDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTL
Sbjct: 261 EERLKKLMEEIKQSDEIMLFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTL 320
Query: 180 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 239
DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDE+LV+AAQL
Sbjct: 321 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDESLVAAAQL 380
Query: 240 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 299
SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQ+PEEARELEKE+RQITKEK+EAVRGQDFE
Sbjct: 381 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQVPEEARELEKEVRQITKEKDEAVRGQDFE 440
Query: 300 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 359
KAGELRDREMDL+AQI+A+V+KGKEMSKAETEAGDVGP VTE DIQHIVS+WTGIPVEKV
Sbjct: 441 KAGELRDREMDLRAQIAAIVEKGKEMSKAETEAGDVGPTVTESDIQHIVSSWTGIPVEKV 500
Query: 360 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 419
STDESDRLLKME+TLHKRV+GQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK
Sbjct: 501 STDESDRLLKMEDTLHKRVVGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 560
Query: 420 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 479
SELAKALAAYYFGSEEAMIRLDMSE+MERHTV+KLIGSPPGYVGYTEGGQLTEAVRRRPY
Sbjct: 561 SELAKALAAYYFGSEEAMIRLDMSEYMERHTVAKLIGSPPGYVGYTEGGQLTEAVRRRPY 620
Query: 480 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 539
TVVLFDEIEKAHPDVFN+MLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR+
Sbjct: 621 TVVLFDEIEKAHPDVFNIMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRK 680
Query: 540 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 599
IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVK+IADIMLK
Sbjct: 681 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKDIADIMLK 740
Query: 600 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 659
EVF+RLK K+IELQVTERF +RVV+EGYNP+YGARPLRRAIMRLLEDSMAEKML+ EIKE
Sbjct: 741 EVFERLKAKEIELQVTERFIDRVVDEGYNPAYGARPLRRAIMRLLEDSMAEKMLSAEIKE 800
Query: 660 GDSVIVDVDSDGNVTVLNGSS-GAPESLADPLPV 692
GDSVI+DVDSDGNV VLNG S GAP++L D L V
Sbjct: 801 GDSVIIDVDSDGNVIVLNGQSGGAPDALPDVLNV 834
>gi|461753|sp|P35100.1|CLPC_PEA RecName: Full=Chaperone protein ClpC, chloroplastic; AltName:
Full=ATP-dependent Clp protease ATP-binding subunit ClpC
homolog; AltName: Full=Casein lytic proteinase C; Flags:
Precursor
gi|169128|gb|AAA33680.1| nuclear encoded precursor to chloroplast protein [Pisum sativum]
Length = 922
Score = 1309 bits (3387), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 640/692 (92%), Positives = 669/692 (96%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
MVGES ++V A VG GSS NK PTLEEYGTNLTKLAEEGKLDPVVGRQPQIERV QILGR
Sbjct: 231 MVGESADSVTATVGSGSSNNKTPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVTQILGR 290
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNPCLIGEPGVGKTAIAEGLAQRIA+GDVP+TIEGKKVITLDMGLLVAGTKYRGEFE
Sbjct: 291 RTKNNPCLIGEPGVGKTAIAEGLAQRIANGDVPETIEGKKVITLDMGLLVAGTKYRGEFE 350
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
ERLKKLMEEIKQSD+IILFIDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTLD
Sbjct: 351 ERLKKLMEEIKQSDDIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLD 410
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRKHIEKDP LERRFQPVKVPEP+VDETIQILKGLRERYEIHHKLRYTDEAL++AAQLS
Sbjct: 411 EYRKHIEKDPDLERRFQPVKVPEPTVDETIQILKGLRERYEIHHKLRYTDEALIAAAQLS 470
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
YQYISDRFLPDKAIDL+DEAGSRVRL+HAQLPEEA+EL+KE+R+I KEK E VR QDFEK
Sbjct: 471 YQYISDRFLPDKAIDLVDEAGSRVRLQHAQLPEEAKELDKEVRKIVKEKEEYVRNQDFEK 530
Query: 301 AGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVS 360
AGELRD+EMDLKAQISAL++KGKEMSKAETE D GP+VTEVDIQHIVS+WTGIPV+KVS
Sbjct: 531 AGELRDKEMDLKAQISALIEKGKEMSKAETETADEGPIVTEVDIQHIVSSWTGIPVDKVS 590
Query: 361 TDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 420
DESDRLLKME+TLHKR+IGQDEAV+AISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS
Sbjct: 591 ADESDRLLKMEDTLHKRIIGQDEAVQAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 650
Query: 421 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 480
ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT
Sbjct: 651 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 710
Query: 481 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI 540
VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI
Sbjct: 711 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI 770
Query: 541 GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 600
GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE
Sbjct: 771 GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 830
Query: 601 VFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEG 660
VF RLKTK+IELQVTERFR+RVV+EGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEG
Sbjct: 831 VFQRLKTKEIELQVTERFRDRVVDEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEG 890
Query: 661 DSVIVDVDSDGNVTVLNGSSGAPESLADPLPV 692
DSVIVDVDSDG V VLNGSSG PESL + L +
Sbjct: 891 DSVIVDVDSDGKVIVLNGSSGTPESLPEALSI 922
>gi|357520587|ref|XP_003630582.1| ATP-dependent Clp protease ATP-binding subunit clpA-like protein
[Medicago truncatula]
gi|355524604|gb|AET05058.1| ATP-dependent Clp protease ATP-binding subunit clpA-like protein
[Medicago truncatula]
Length = 926
Score = 1308 bits (3386), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 641/692 (92%), Positives = 672/692 (97%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
MVGE ++VGA VG GSS NKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERV QILGR
Sbjct: 235 MVGEGADSVGATVGSGSSNNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVTQILGR 294
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNPCLIGEPGVGKTAIAEGLAQRIA+GDVP+TIEGKKVITLDMGLLVAGTKYRGEFE
Sbjct: 295 RTKNNPCLIGEPGVGKTAIAEGLAQRIANGDVPETIEGKKVITLDMGLLVAGTKYRGEFE 354
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTLD
Sbjct: 355 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLD 414
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRKHIEKDPALERRFQPVKVPEP+V ETIQILKGLRERYEIHHKLRYTDEALV+AA+LS
Sbjct: 415 EYRKHIEKDPALERRFQPVKVPEPTVPETIQILKGLRERYEIHHKLRYTDEALVAAAELS 474
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
+QYISDRFLPDKAIDLIDEAGSRVRL+HAQLPEEAR LEKE+RQI KEK+EAVR Q+FEK
Sbjct: 475 HQYISDRFLPDKAIDLIDEAGSRVRLQHAQLPEEARGLEKEVRQIVKEKDEAVRNQEFEK 534
Query: 301 AGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVS 360
AGELRD+EMDLK QISAL++K KEM+KAE+EAGDVG +VTEVDIQHIV++WTGIPV+KVS
Sbjct: 535 AGELRDKEMDLKTQISALIEKNKEMNKAESEAGDVGALVTEVDIQHIVASWTGIPVDKVS 594
Query: 361 TDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 420
DESDRLLKME+TLHKR+IGQ EAV+AISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS
Sbjct: 595 VDESDRLLKMEDTLHKRIIGQHEAVEAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 654
Query: 421 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 480
ELAKALA+YYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT
Sbjct: 655 ELAKALASYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 714
Query: 481 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI 540
VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI
Sbjct: 715 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI 774
Query: 541 GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 600
GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE
Sbjct: 775 GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 834
Query: 601 VFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEG 660
VF+RLKTK+IEL VTERFRERVV+EGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEG
Sbjct: 835 VFERLKTKEIELSVTERFRERVVDEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEG 894
Query: 661 DSVIVDVDSDGNVTVLNGSSGAPESLADPLPV 692
DSVIVD DSDGNV VLNGS+GAP+SL D LPV
Sbjct: 895 DSVIVDADSDGNVIVLNGSTGAPDSLPDALPV 926
>gi|224136316|ref|XP_002322299.1| predicted protein [Populus trichocarpa]
gi|222869295|gb|EEF06426.1| predicted protein [Populus trichocarpa]
Length = 932
Score = 1307 bits (3383), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 640/684 (93%), Positives = 671/684 (98%), Gaps = 1/684 (0%)
Query: 10 GAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLI 69
G+ VG GSS NKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERV+QILGRRTKNNPCLI
Sbjct: 248 GSTVGPGSSNNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVIQILGRRTKNNPCLI 307
Query: 70 GEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEE 129
GEPGVGKTAIAEGLAQRIASGDVP+TIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEE
Sbjct: 308 GEPGVGKTAIAEGLAQRIASGDVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEE 367
Query: 130 IKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKD 189
IKQSDEI+LFIDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTLDEYRKHIEKD
Sbjct: 368 IKQSDEIMLFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIEKD 427
Query: 190 PALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFL 249
PALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDE+LV+AAQLSYQYISDRFL
Sbjct: 428 PALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDESLVAAAQLSYQYISDRFL 487
Query: 250 PDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREM 309
PDKAIDLIDEAGSRVRLRHAQ+PEEARELEKE+RQITKEK+EAVRGQDFEKAGELRDREM
Sbjct: 488 PDKAIDLIDEAGSRVRLRHAQVPEEARELEKEVRQITKEKDEAVRGQDFEKAGELRDREM 547
Query: 310 DLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLK 369
DL+AQI+A+V+KGKEMSKAETEAGDVGP VTE DIQHIVS+WTGIPVEKVSTDESDRLLK
Sbjct: 548 DLRAQIAAIVEKGKEMSKAETEAGDVGPTVTESDIQHIVSSWTGIPVEKVSTDESDRLLK 607
Query: 370 MEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAY 429
ME+TLHKRV+GQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAY
Sbjct: 608 MEDTLHKRVVGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAY 667
Query: 430 YFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEK 489
YFGSEEAMIRLDMSE+MERHTV+KLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEK
Sbjct: 668 YFGSEEAMIRLDMSEYMERHTVAKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEK 727
Query: 490 AHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEK 549
AHPDVFN+MLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR+IGFDLDYDEK
Sbjct: 728 AHPDVFNIMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRKIGFDLDYDEK 787
Query: 550 DSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKD 609
DSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVK+IADIMLKEVF+RLK K+
Sbjct: 788 DSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKDIADIMLKEVFERLKAKE 847
Query: 610 IELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDS 669
IELQVTERFR+RVV+EGYNP+YGARPLRRAIMRLLEDSMAEKML+ EIKEGDSVI+DVDS
Sbjct: 848 IELQVTERFRDRVVDEGYNPAYGARPLRRAIMRLLEDSMAEKMLSAEIKEGDSVIIDVDS 907
Query: 670 DGNVTVLNGSS-GAPESLADPLPV 692
DGNV VLNG S GAP++L D L V
Sbjct: 908 DGNVIVLNGQSGGAPDALPDVLNV 931
>gi|356527573|ref|XP_003532383.1| PREDICTED: chaperone protein ClpC, chloroplastic-like [Glycine max]
Length = 919
Score = 1306 bits (3381), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 644/691 (93%), Positives = 672/691 (97%), Gaps = 1/691 (0%)
Query: 1 MVGESTEAVGAGVGGGSSGN-KMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 59
MVGE ++VGA VG GSS N KMPTLEEYGTNLTKLAEEGKLDPV+GRQPQIERV QILG
Sbjct: 227 MVGEGADSVGATVGPGSSNNNKMPTLEEYGTNLTKLAEEGKLDPVMGRQPQIERVTQILG 286
Query: 60 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 119
RRTKNNPCLIGEPGVGKTAIAEGLAQRIA+GDVP+TIEGKKVITLDMGLLVAGTKYRGEF
Sbjct: 287 RRTKNNPCLIGEPGVGKTAIAEGLAQRIANGDVPETIEGKKVITLDMGLLVAGTKYRGEF 346
Query: 120 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 179
EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTL
Sbjct: 347 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTL 406
Query: 180 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 239
DEYRKHIEKDPALERRFQPVKVPEP+V+ETIQILKGLRERYEIHHKL YTD+ALV+AAQL
Sbjct: 407 DEYRKHIEKDPALERRFQPVKVPEPTVNETIQILKGLRERYEIHHKLHYTDDALVAAAQL 466
Query: 240 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 299
S+QYISDRFLPDKAIDLIDEAGSRVRL+HAQLPEEAREL+KE+RQI KEK E+VR QDFE
Sbjct: 467 SHQYISDRFLPDKAIDLIDEAGSRVRLQHAQLPEEARELDKEVRQIVKEKEESVRNQDFE 526
Query: 300 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 359
KAGELRD+EMDLKAQISAL++KGKEMSKAE+EAGD GP+VTEVDIQHIVS+WTGIPVEKV
Sbjct: 527 KAGELRDKEMDLKAQISALIEKGKEMSKAESEAGDEGPMVTEVDIQHIVSSWTGIPVEKV 586
Query: 360 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 419
STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK
Sbjct: 587 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 646
Query: 420 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 479
SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY
Sbjct: 647 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 706
Query: 480 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 539
TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR+
Sbjct: 707 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRK 766
Query: 540 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 599
IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK
Sbjct: 767 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 826
Query: 600 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 659
EVF RLK K+I+L VTERFRERVV+EGYNPSYGARPLRRAIM+LLEDSMAEKMLAREIKE
Sbjct: 827 EVFQRLKAKEIDLSVTERFRERVVDEGYNPSYGARPLRRAIMQLLEDSMAEKMLAREIKE 886
Query: 660 GDSVIVDVDSDGNVTVLNGSSGAPESLADPL 690
GDSVIVD DS+GNV VLNGSSGAP+SL D L
Sbjct: 887 GDSVIVDSDSEGNVIVLNGSSGAPDSLEDVL 917
>gi|2921158|gb|AAC04687.1| ClpC [Arabidopsis thaliana]
Length = 928
Score = 1304 bits (3375), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 645/696 (92%), Positives = 671/696 (96%), Gaps = 5/696 (0%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
MVGE+ E V A VGGGSS NKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR
Sbjct: 233 MVGENNE-VTANVGGGSSSNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 291
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVP+TIEGKKVITLDMGLLVAGTKYRGEFE
Sbjct: 292 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPETIEGKKVITLDMGLLVAGTKYRGEFE 351
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
ERLKKLMEEI+QSDEIILFIDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTLD
Sbjct: 352 ERLKKLMEEIRQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLD 411
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRKHIEKDPALERRFQPVKVPEP+VDETIQILKGLRERYEIHHKLRYTDE+LV+AAQLS
Sbjct: 412 EYRKHIEKDPALERRFQPVKVPEPTVDETIQILKGLRERYEIHHKLRYTDESLVAAAQLS 471
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
YQYISDRFLPDKAIDLIDEAGSRVRLRHAQ+PEE RELEKELRQITKEKNEAVRGQDFEK
Sbjct: 472 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQVPEEVRELEKELRQITKEKNEAVRGQDFEK 531
Query: 301 AGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVS 360
AG LRDRE++L+A++SA+ KGKEMSKAE+E G+ GP+VTE DIQHIVS+WTGIPVEKVS
Sbjct: 532 AGTLRDREIELRAEVSAIQAKGKEMSKAESETGEEGPMVTESDIQHIVSSWTGIPVEKVS 591
Query: 361 TDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 420
TDESDRLLKMEETLHKR+IGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS
Sbjct: 592 TDESDRLLKMEETLHKRIIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 651
Query: 421 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 480
ELAKALAAYYFGSEEAMIRLDMSEFMERHTVS LIGS PGYVGYTEGGQLTEAVRRRPYT
Sbjct: 652 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSTLIGSLPGYVGYTEGGQLTEAVRRRPYT 711
Query: 481 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI 540
VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI
Sbjct: 712 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI 771
Query: 541 GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 600
GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADI+LKE
Sbjct: 772 GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADILLKE 831
Query: 601 VFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEG 660
VF+RLK K+IELQVTERF+ERVV+EGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEG
Sbjct: 832 VFERLKKKEIELQVTERFKERVVDEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEG 891
Query: 661 DSVIVDVDSDGNVTVLNGSSGAP----ESLADPLPV 692
DSVIVDVD++GNVTVLNG SG P E D LPV
Sbjct: 892 DSVIVDVDAEGNVTVLNGGSGTPTTSLEEQEDSLPV 927
>gi|347602486|sp|Q7F9I1.2|CLPC1_ORYSJ RecName: Full=Chaperone protein ClpC1, chloroplastic; AltName:
Full=ATP-dependent Clp protease ATP-binding subunit ClpC
homolog 1; AltName: Full=Casein lytic proteinase C1;
Flags: Precursor
Length = 918
Score = 1279 bits (3309), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 637/692 (92%), Positives = 674/692 (97%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
MVGESTEAVGAGVGGGSSG KMPTLEEYGTNLTKLAEEGKLDPVVGRQ QIERV QILGR
Sbjct: 227 MVGESTEAVGAGVGGGSSGQKMPTLEEYGTNLTKLAEEGKLDPVVGRQDQIERVTQILGR 286
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNPCLIGEPGVGKTAIAEGLAQRI++GDVP+TIEGKKVITLDMGLLVAGTKYRGEFE
Sbjct: 287 RTKNNPCLIGEPGVGKTAIAEGLAQRISNGDVPETIEGKKVITLDMGLLVAGTKYRGEFE 346
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
ERLKKLMEEIKQ+D+IILFIDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTLD
Sbjct: 347 ERLKKLMEEIKQNDDIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLD 406
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRKHIEKDPALERRFQPVKVPEP+VDETIQIL+GLRERYE+HHKLRYTD++L++AAQLS
Sbjct: 407 EYRKHIEKDPALERRFQPVKVPEPTVDETIQILRGLRERYELHHKLRYTDDSLIAAAQLS 466
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLP+EA+EL+KELRQ+TK+KNEAVRGQDFEK
Sbjct: 467 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPDEAKELDKELRQVTKDKNEAVRGQDFEK 526
Query: 301 AGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVS 360
AGELRDREM+LKAQI+A++DK KEM KAETE+G+VGP+VTE DIQHIVS+WTGIPVEKVS
Sbjct: 527 AGELRDREMELKAQITAIIDKSKEMVKAETESGEVGPLVTEADIQHIVSSWTGIPVEKVS 586
Query: 361 TDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 420
+DESDRLLKMEETLH R+IGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS
Sbjct: 587 SDESDRLLKMEETLHTRIIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 646
Query: 421 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 480
ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT
Sbjct: 647 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 706
Query: 481 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI 540
VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR+I
Sbjct: 707 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRKI 766
Query: 541 GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 600
GFDLDYDEKD+SYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE
Sbjct: 767 GFDLDYDEKDTSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 826
Query: 601 VFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEG 660
VFDRLK KDI+LQVTE+FR+RVV+EGYNPSYGARPLRRAIMRLLEDS+AEKMLA E+KEG
Sbjct: 827 VFDRLKAKDIDLQVTEKFRDRVVDEGYNPSYGARPLRRAIMRLLEDSLAEKMLAGEVKEG 886
Query: 661 DSVIVDVDSDGNVTVLNGSSGAPESLADPLPV 692
DS IVDVDS+G V VLNG SG PE LA L V
Sbjct: 887 DSAIVDVDSEGKVIVLNGGSGVPEPLAPALSV 918
>gi|125590233|gb|EAZ30583.1| hypothetical protein OsJ_14634 [Oryza sativa Japonica Group]
Length = 1033
Score = 1278 bits (3307), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 637/692 (92%), Positives = 674/692 (97%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
MVGESTEAVGAGVGGGSSG KMPTLEEYGTNLTKLAEEGKLDPVVGRQ QIERV QILGR
Sbjct: 342 MVGESTEAVGAGVGGGSSGQKMPTLEEYGTNLTKLAEEGKLDPVVGRQDQIERVTQILGR 401
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNPCLIGEPGVGKTAIAEGLAQRI++GDVP+TIEGKKVITLDMGLLVAGTKYRGEFE
Sbjct: 402 RTKNNPCLIGEPGVGKTAIAEGLAQRISNGDVPETIEGKKVITLDMGLLVAGTKYRGEFE 461
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
ERLKKLMEEIKQ+D+IILFIDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTLD
Sbjct: 462 ERLKKLMEEIKQNDDIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLD 521
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRKHIEKDPALERRFQPVKVPEP+VDETIQIL+GLRERYE+HHKLRYTD++L++AAQLS
Sbjct: 522 EYRKHIEKDPALERRFQPVKVPEPTVDETIQILRGLRERYELHHKLRYTDDSLIAAAQLS 581
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLP+EA+EL+KELRQ+TK+KNEAVRGQDFEK
Sbjct: 582 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPDEAKELDKELRQVTKDKNEAVRGQDFEK 641
Query: 301 AGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVS 360
AGELRDREM+LKAQI+A++DK KEM KAETE+G+VGP+VTE DIQHIVS+WTGIPVEKVS
Sbjct: 642 AGELRDREMELKAQITAIIDKSKEMVKAETESGEVGPLVTEADIQHIVSSWTGIPVEKVS 701
Query: 361 TDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 420
+DESDRLLKMEETLH R+IGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS
Sbjct: 702 SDESDRLLKMEETLHTRIIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 761
Query: 421 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 480
ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT
Sbjct: 762 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 821
Query: 481 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI 540
VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR+I
Sbjct: 822 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRKI 881
Query: 541 GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 600
GFDLDYDEKD+SYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE
Sbjct: 882 GFDLDYDEKDTSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 941
Query: 601 VFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEG 660
VFDRLK KDI+LQVTE+FR+RVV+EGYNPSYGARPLRRAIMRLLEDS+AEKMLA E+KEG
Sbjct: 942 VFDRLKAKDIDLQVTEKFRDRVVDEGYNPSYGARPLRRAIMRLLEDSLAEKMLAGEVKEG 1001
Query: 661 DSVIVDVDSDGNVTVLNGSSGAPESLADPLPV 692
DS IVDVDS+G V VLNG SG PE LA L V
Sbjct: 1002 DSAIVDVDSEGKVIVLNGGSGVPEPLAPALSV 1033
>gi|218186618|gb|EEC69045.1| hypothetical protein OsI_37876 [Oryza sativa Indica Group]
Length = 1412
Score = 1278 bits (3307), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 631/689 (91%), Positives = 674/689 (97%), Gaps = 1/689 (0%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
M+GE+TEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR
Sbjct: 721 MIGETTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 780
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNPCLIGEPGVGKTAIAEGLAQRI++GDVP+TIEGKKVITLDMGLLVAGTKYRGEFE
Sbjct: 781 RTKNNPCLIGEPGVGKTAIAEGLAQRISTGDVPETIEGKKVITLDMGLLVAGTKYRGEFE 840
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTLD
Sbjct: 841 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLD 900
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRKHIEKDPALERRFQPV+VPEP+VDETI+IL+GLRERYEIHHKLRYTD+AL+SAA+LS
Sbjct: 901 EYRKHIEKDPALERRFQPVRVPEPTVDETIEILRGLRERYEIHHKLRYTDDALISAAKLS 960
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
YQYISDRFLPDKAIDLIDEAGSRVRLRHAQ+PEEAREL+KEL+QITK+KNEAVR QDFEK
Sbjct: 961 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQVPEEARELDKELKQITKDKNEAVRSQDFEK 1020
Query: 301 AGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVS 360
AGELRDREM+LKAQI+AL+DK KEMSKAETE+G+ GP+V E DIQHIVS+WTGIPVEKVS
Sbjct: 1021 AGELRDREMELKAQITALIDKSKEMSKAETESGETGPLVNEADIQHIVSSWTGIPVEKVS 1080
Query: 361 TDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 420
+DESD+LLKMEETLH+RVIGQDEAVKAISR+IRRARVGLKNPNRPIASFIF+GPTGVGKS
Sbjct: 1081 SDESDKLLKMEETLHQRVIGQDEAVKAISRSIRRARVGLKNPNRPIASFIFAGPTGVGKS 1140
Query: 421 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 480
ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT
Sbjct: 1141 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 1200
Query: 481 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI 540
VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR+I
Sbjct: 1201 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRKI 1260
Query: 541 GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 600
GFDLDYDEKDSSY+RIKSLV EE+KQYFRPEFLNRLDEMIVFRQLTKLEVKEIA+IMLKE
Sbjct: 1261 GFDLDYDEKDSSYSRIKSLVVEEMKQYFRPEFLNRLDEMIVFRQLTKLEVKEIAEIMLKE 1320
Query: 601 VFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEG 660
VFDRLK KDI+LQVTE+F+ER+V+EG+NPSYGARPLRRAIMRLLEDS+AEKMLA E+KEG
Sbjct: 1321 VFDRLKAKDIDLQVTEKFKERIVDEGFNPSYGARPLRRAIMRLLEDSLAEKMLAGEVKEG 1380
Query: 661 DSVIVDVDSDGNVTVLNGSSGAPESLADP 689
DS IVDVDS+G V VLNG SG PE L+ P
Sbjct: 1381 DSAIVDVDSEGKVIVLNGQSGLPE-LSTP 1408
>gi|38347158|emb|CAE05148.2| OSJNBa0039C07.4 [Oryza sativa Japonica Group]
Length = 888
Score = 1278 bits (3306), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 637/692 (92%), Positives = 674/692 (97%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
MVGESTEAVGAGVGGGSSG KMPTLEEYGTNLTKLAEEGKLDPVVGRQ QIERV QILGR
Sbjct: 197 MVGESTEAVGAGVGGGSSGQKMPTLEEYGTNLTKLAEEGKLDPVVGRQDQIERVTQILGR 256
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNPCLIGEPGVGKTAIAEGLAQRI++GDVP+TIEGKKVITLDMGLLVAGTKYRGEFE
Sbjct: 257 RTKNNPCLIGEPGVGKTAIAEGLAQRISNGDVPETIEGKKVITLDMGLLVAGTKYRGEFE 316
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
ERLKKLMEEIKQ+D+IILFIDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTLD
Sbjct: 317 ERLKKLMEEIKQNDDIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLD 376
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRKHIEKDPALERRFQPVKVPEP+VDETIQIL+GLRERYE+HHKLRYTD++L++AAQLS
Sbjct: 377 EYRKHIEKDPALERRFQPVKVPEPTVDETIQILRGLRERYELHHKLRYTDDSLIAAAQLS 436
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLP+EA+EL+KELRQ+TK+KNEAVRGQDFEK
Sbjct: 437 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPDEAKELDKELRQVTKDKNEAVRGQDFEK 496
Query: 301 AGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVS 360
AGELRDREM+LKAQI+A++DK KEM KAETE+G+VGP+VTE DIQHIVS+WTGIPVEKVS
Sbjct: 497 AGELRDREMELKAQITAIIDKSKEMVKAETESGEVGPLVTEADIQHIVSSWTGIPVEKVS 556
Query: 361 TDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 420
+DESDRLLKMEETLH R+IGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS
Sbjct: 557 SDESDRLLKMEETLHTRIIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 616
Query: 421 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 480
ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT
Sbjct: 617 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 676
Query: 481 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI 540
VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR+I
Sbjct: 677 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRKI 736
Query: 541 GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 600
GFDLDYDEKD+SYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE
Sbjct: 737 GFDLDYDEKDTSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 796
Query: 601 VFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEG 660
VFDRLK KDI+LQVTE+FR+RVV+EGYNPSYGARPLRRAIMRLLEDS+AEKMLA E+KEG
Sbjct: 797 VFDRLKAKDIDLQVTEKFRDRVVDEGYNPSYGARPLRRAIMRLLEDSLAEKMLAGEVKEG 856
Query: 661 DSVIVDVDSDGNVTVLNGSSGAPESLADPLPV 692
DS IVDVDS+G V VLNG SG PE LA L V
Sbjct: 857 DSAIVDVDSEGKVIVLNGGSGVPEPLAPALSV 888
>gi|413918180|gb|AFW58112.1| hypothetical protein ZEAMMB73_120778 [Zea mays]
Length = 921
Score = 1275 bits (3300), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 636/690 (92%), Positives = 670/690 (97%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
MVGESTEAVGAGVGGGSSG KMPTLEEYGTNLTKLAEEGKLDPVVGRQ QIERV QILGR
Sbjct: 230 MVGESTEAVGAGVGGGSSGQKMPTLEEYGTNLTKLAEEGKLDPVVGRQDQIERVTQILGR 289
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNPCLIGEPGVGKTAIAEGLAQRI++GDVP+TIEGKKVITLDMGLLVAGTKYRGEFE
Sbjct: 290 RTKNNPCLIGEPGVGKTAIAEGLAQRISNGDVPETIEGKKVITLDMGLLVAGTKYRGEFE 349
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
ERLKKLMEEIKQ+++IILFIDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTLD
Sbjct: 350 ERLKKLMEEIKQNEDIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLD 409
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRKHIEKDPALERRFQPVKVPEP+VDETIQIL+GLRERYE+HHKLRYTD+AL++AAQLS
Sbjct: 410 EYRKHIEKDPALERRFQPVKVPEPTVDETIQILRGLRERYELHHKLRYTDDALIAAAQLS 469
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLP+EA+EL+KELRQITK+KNEAVRGQDFEK
Sbjct: 470 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPDEAKELDKELRQITKQKNEAVRGQDFEK 529
Query: 301 AGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVS 360
AGELRDREM+LKAQI+A++DK KEM KAETE+GDVGP+VTE DIQHIVS+WTGIPVEKVS
Sbjct: 530 AGELRDREMELKAQITAIIDKSKEMIKAETESGDVGPLVTEADIQHIVSSWTGIPVEKVS 589
Query: 361 TDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 420
+DESDRLLKMEETLH R+IGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS
Sbjct: 590 SDESDRLLKMEETLHTRIIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 649
Query: 421 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 480
ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT
Sbjct: 650 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 709
Query: 481 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI 540
VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR+I
Sbjct: 710 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRKI 769
Query: 541 GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 600
GFDLDYDEKD+SYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE
Sbjct: 770 GFDLDYDEKDTSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 829
Query: 601 VFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEG 660
VFDRLK K+I LQVTE+FR+RVV+EGYNPSYGARPLRRAIMRLLEDS+AEKMLA E+KEG
Sbjct: 830 VFDRLKAKEINLQVTEKFRDRVVDEGYNPSYGARPLRRAIMRLLEDSLAEKMLAGEVKEG 889
Query: 661 DSVIVDVDSDGNVTVLNGSSGAPESLADPL 690
DS IVDVDSDG V VLNG SG E L L
Sbjct: 890 DSAIVDVDSDGKVIVLNGGSGVAEPLEPAL 919
>gi|357149204|ref|XP_003575035.1| PREDICTED: chaperone protein ClpC1, chloroplastic-like
[Brachypodium distachyon]
Length = 921
Score = 1275 bits (3298), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 633/690 (91%), Positives = 672/690 (97%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
MVGESTEAVGAGVGGGSSG KMPTLEEYGTNLTKLAEEGKLDPVVGRQ QIERV QILGR
Sbjct: 230 MVGESTEAVGAGVGGGSSGQKMPTLEEYGTNLTKLAEEGKLDPVVGRQDQIERVTQILGR 289
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNPCLIGEPGVGKTAIAEGLAQRI +GDVP+TIEGKKVITLDMGLLVAGTKYRGEFE
Sbjct: 290 RTKNNPCLIGEPGVGKTAIAEGLAQRITNGDVPETIEGKKVITLDMGLLVAGTKYRGEFE 349
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
ERLKKLMEEIKQSD+IILFIDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTLD
Sbjct: 350 ERLKKLMEEIKQSDDIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLD 409
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRKHIEKDPALERRFQPVKVPEP+VDETIQIL+GLRERYE+HHKLRYTD+AL++AA+LS
Sbjct: 410 EYRKHIEKDPALERRFQPVKVPEPTVDETIQILRGLRERYELHHKLRYTDDALIAAAKLS 469
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLP+EA+EL+KELRQ+TK+KNEAVRGQDFEK
Sbjct: 470 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPDEAKELDKELRQVTKDKNEAVRGQDFEK 529
Query: 301 AGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVS 360
AGELRD+EM+LKAQI+A++DK KEM KAETE+G+VGP+VTE DIQHIVS+WTGIPVEKVS
Sbjct: 530 AGELRDKEMELKAQITAIIDKSKEMVKAETESGEVGPLVTEADIQHIVSSWTGIPVEKVS 589
Query: 361 TDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 420
+DESDRLLKMEETLH+R+IGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS
Sbjct: 590 SDESDRLLKMEETLHQRIIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 649
Query: 421 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 480
ELAKALA+YYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT
Sbjct: 650 ELAKALASYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 709
Query: 481 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI 540
VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR+I
Sbjct: 710 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRKI 769
Query: 541 GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 600
GFDLDYDEKD+SYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE
Sbjct: 770 GFDLDYDEKDTSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 829
Query: 601 VFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEG 660
VFDRLK K+I+LQVTERFR+RVV+EGYNPSYGARPLRRAIMRLLEDS+AEKMLA E+KEG
Sbjct: 830 VFDRLKVKEIDLQVTERFRDRVVDEGYNPSYGARPLRRAIMRLLEDSLAEKMLAGEVKEG 889
Query: 661 DSVIVDVDSDGNVTVLNGSSGAPESLADPL 690
DS IVDVDS+G V VLN SG PE +A L
Sbjct: 890 DSAIVDVDSEGKVIVLNSGSGVPEPMAPVL 919
>gi|242075576|ref|XP_002447724.1| hypothetical protein SORBIDRAFT_06g014590 [Sorghum bicolor]
gi|241938907|gb|EES12052.1| hypothetical protein SORBIDRAFT_06g014590 [Sorghum bicolor]
Length = 921
Score = 1273 bits (3295), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 635/690 (92%), Positives = 669/690 (96%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
MVGESTEAVGAGVGGGSSG KMPTLEEYGTNLTKLAEEGKLDPVVGR+ QIERV QILGR
Sbjct: 230 MVGESTEAVGAGVGGGSSGQKMPTLEEYGTNLTKLAEEGKLDPVVGRRDQIERVTQILGR 289
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNPCLIGEPGVGKTAIAEGLAQRIA+GDVP+TIEGKKVITLDMGLLVAGTKYRGEFE
Sbjct: 290 RTKNNPCLIGEPGVGKTAIAEGLAQRIANGDVPETIEGKKVITLDMGLLVAGTKYRGEFE 349
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
ERLKKLMEEIKQ+++IILFIDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTLD
Sbjct: 350 ERLKKLMEEIKQNEDIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLD 409
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRKHIEKDPALERRFQPVKVPEP+VDETIQIL+GLRERYE+HHKLRYTD+AL++AAQLS
Sbjct: 410 EYRKHIEKDPALERRFQPVKVPEPTVDETIQILRGLRERYELHHKLRYTDDALIAAAQLS 469
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLP+EA+EL+KELRQITK+KNEAVR QDFEK
Sbjct: 470 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPDEAKELDKELRQITKQKNEAVRSQDFEK 529
Query: 301 AGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVS 360
AGELRDREM+LKAQI+A++DK KEM KAETE+G+VGP+VTE DIQHIVS+WTGIPVEKVS
Sbjct: 530 AGELRDREMELKAQITAIIDKSKEMIKAETESGEVGPLVTEADIQHIVSSWTGIPVEKVS 589
Query: 361 TDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 420
+DESDRLLKMEETLH R+IGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS
Sbjct: 590 SDESDRLLKMEETLHTRIIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 649
Query: 421 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 480
ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT
Sbjct: 650 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 709
Query: 481 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI 540
VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR+I
Sbjct: 710 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRKI 769
Query: 541 GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 600
GFDLDYDEKD+SYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE
Sbjct: 770 GFDLDYDEKDTSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 829
Query: 601 VFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEG 660
VFDRLK KDI LQVTE+FR+RVV+EGYNPSYGARPLRRAIMRLLEDS+AEKMLA E+KEG
Sbjct: 830 VFDRLKAKDINLQVTEKFRDRVVDEGYNPSYGARPLRRAIMRLLEDSLAEKMLAGEVKEG 889
Query: 661 DSVIVDVDSDGNVTVLNGSSGAPESLADPL 690
DS IVDVDSDG V VLNG SG E L L
Sbjct: 890 DSAIVDVDSDGKVIVLNGGSGVAEPLEPAL 919
>gi|115487910|ref|NP_001066442.1| Os12g0230100 [Oryza sativa Japonica Group]
gi|122248633|sp|Q2QVG9.2|CLPC2_ORYSJ RecName: Full=Chaperone protein ClpC2, chloroplastic; AltName:
Full=ATP-dependent Clp protease ATP-binding subunit ClpC
homolog 2; AltName: Full=Casein lytic proteinase C2;
Flags: Precursor
gi|108862366|gb|ABA96309.2| ATP-dependent Clp protease ATP-binding subunit clpA
CD4B,chloroplast precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|108862367|gb|ABG21929.1| ATP-dependent Clp protease ATP-binding subunit clpA
CD4B,chloroplast precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113648949|dbj|BAF29461.1| Os12g0230100 [Oryza sativa Japonica Group]
Length = 919
Score = 1272 bits (3291), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 631/689 (91%), Positives = 674/689 (97%), Gaps = 1/689 (0%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
M+GE+TEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR
Sbjct: 228 MIGETTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 287
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNPCLIGEPGVGKTAIAEGLAQRI++GDVP+TIEGKKVITLDMGLLVAGTKYRGEFE
Sbjct: 288 RTKNNPCLIGEPGVGKTAIAEGLAQRISTGDVPETIEGKKVITLDMGLLVAGTKYRGEFE 347
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTLD
Sbjct: 348 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLD 407
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRKHIEKDPALERRFQPV+VPEP+VDETI+IL+GLRERYEIHHKLRYTD+AL+SAA+LS
Sbjct: 408 EYRKHIEKDPALERRFQPVRVPEPTVDETIEILRGLRERYEIHHKLRYTDDALISAAKLS 467
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
YQYISDRFLPDKAIDLIDEAGSRVRLRHAQ+PEEAREL+KEL+QITK+KNEAVR QDFEK
Sbjct: 468 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQVPEEARELDKELKQITKDKNEAVRSQDFEK 527
Query: 301 AGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVS 360
AGELRDREM+LKAQI+AL+DK KEMSKAETE+G+ GP+V E DIQHIVS+WTGIPVEKVS
Sbjct: 528 AGELRDREMELKAQITALIDKSKEMSKAETESGETGPLVNEADIQHIVSSWTGIPVEKVS 587
Query: 361 TDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 420
+DESD+LLKMEETLH+RVIGQDEAVKAISR+IRRARVGLKNPNRPIASFIF+GPTGVGKS
Sbjct: 588 SDESDKLLKMEETLHQRVIGQDEAVKAISRSIRRARVGLKNPNRPIASFIFAGPTGVGKS 647
Query: 421 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 480
ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT
Sbjct: 648 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 707
Query: 481 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI 540
VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR+I
Sbjct: 708 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRKI 767
Query: 541 GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 600
GFDLDYDEKDSSY+RIKSLV EE+KQYFRPEFLNRLDEMIVFRQLTKLEVKEIA+IMLKE
Sbjct: 768 GFDLDYDEKDSSYSRIKSLVVEEMKQYFRPEFLNRLDEMIVFRQLTKLEVKEIAEIMLKE 827
Query: 601 VFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEG 660
VFDRLK KDI+LQVTE+F+ER+V+EG+NPSYGARPLRRAIMRLLEDS+AEKMLA E+KEG
Sbjct: 828 VFDRLKAKDIDLQVTEKFKERIVDEGFNPSYGARPLRRAIMRLLEDSLAEKMLAGEVKEG 887
Query: 661 DSVIVDVDSDGNVTVLNGSSGAPESLADP 689
DS IVDVDS+G V VLNG SG PE L+ P
Sbjct: 888 DSAIVDVDSEGKVIVLNGQSGLPE-LSTP 915
>gi|357149201|ref|XP_003575034.1| PREDICTED: chaperone protein ClpC1, chloroplastic-like
[Brachypodium distachyon]
Length = 879
Score = 1268 bits (3281), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 632/690 (91%), Positives = 670/690 (97%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
MVGESTEAVGAGVGGGSSG KMPTLEEYGTNLTKLAEEGKLDPVVGRQ QIERV QILGR
Sbjct: 188 MVGESTEAVGAGVGGGSSGQKMPTLEEYGTNLTKLAEEGKLDPVVGRQDQIERVTQILGR 247
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNPCLIGEPGVGKTAIAEGLAQRI +GDVP+TIEGKKVITLDMGLLVAGTKYRGEFE
Sbjct: 248 RTKNNPCLIGEPGVGKTAIAEGLAQRITNGDVPETIEGKKVITLDMGLLVAGTKYRGEFE 307
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
ERLKKLMEEIKQSD+IILFIDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTLD
Sbjct: 308 ERLKKLMEEIKQSDDIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLD 367
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRKHIEKDPALERRFQPVKVPEP+VDETIQIL+GLRERYE+HHKLRYTD+AL +AA+LS
Sbjct: 368 EYRKHIEKDPALERRFQPVKVPEPTVDETIQILRGLRERYELHHKLRYTDDALTAAAKLS 427
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLP+EA+EL+KELR++TK+KNEAVRGQDFEK
Sbjct: 428 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPDEAKELDKELRKVTKDKNEAVRGQDFEK 487
Query: 301 AGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVS 360
AGELRD+EM+LKAQI+A++DK KEM KAETE+G+VGP+VTE DIQHIVS+WTGIPVEKVS
Sbjct: 488 AGELRDKEMELKAQITAIIDKSKEMVKAETESGEVGPLVTEADIQHIVSSWTGIPVEKVS 547
Query: 361 TDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 420
+DESDRLLKMEETLH+R+IGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS
Sbjct: 548 SDESDRLLKMEETLHQRIIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 607
Query: 421 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 480
ELAKALA+YYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT
Sbjct: 608 ELAKALASYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 667
Query: 481 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI 540
VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR+I
Sbjct: 668 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRKI 727
Query: 541 GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 600
GFDLDYDEKD+SYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE
Sbjct: 728 GFDLDYDEKDTSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 787
Query: 601 VFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEG 660
VFDRLK K+I+LQVTERFR+RVV+EGYNPSYGARPLRRAIMRLLEDS+AEKMLA E+KEG
Sbjct: 788 VFDRLKAKEIDLQVTERFRDRVVDEGYNPSYGARPLRRAIMRLLEDSLAEKMLAGEVKEG 847
Query: 661 DSVIVDVDSDGNVTVLNGSSGAPESLADPL 690
DS IVDVDS+G V VLN SG PE L L
Sbjct: 848 DSAIVDVDSEGKVIVLNSGSGVPEPLTPAL 877
>gi|302763781|ref|XP_002965312.1| hypothetical protein SELMODRAFT_439163 [Selaginella moellendorffii]
gi|300167545|gb|EFJ34150.1| hypothetical protein SELMODRAFT_439163 [Selaginella moellendorffii]
Length = 937
Score = 1264 bits (3272), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 630/691 (91%), Positives = 664/691 (96%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
MVGESTEAVGA VGGGSS NKMPTLEEYGTNLTKLAEEGKLDPVVGRQ QIERV QILGR
Sbjct: 243 MVGESTEAVGASVGGGSSSNKMPTLEEYGTNLTKLAEEGKLDPVVGRQQQIERVTQILGR 302
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNPCLIGEPGVGKTAIAEGLAQRIA+GDVP+TIEGKKV+TLDMGLLVAGTKYRGEFE
Sbjct: 303 RTKNNPCLIGEPGVGKTAIAEGLAQRIATGDVPETIEGKKVVTLDMGLLVAGTKYRGEFE 362
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
ERLKKLMEEIKQSD+IIL IDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATT+D
Sbjct: 363 ERLKKLMEEIKQSDDIILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTID 422
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRKHIEKDPALERRFQPV VPEP+VDETIQILKGLRERYEIHHKLRYTDEALV+AAQLS
Sbjct: 423 EYRKHIEKDPALERRFQPVNVPEPTVDETIQILKGLRERYEIHHKLRYTDEALVAAAQLS 482
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEAR+L+KELRQITKEKNEAVRGQDFEK
Sbjct: 483 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARDLDKELRQITKEKNEAVRGQDFEK 542
Query: 301 AGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVS 360
AGELRDREM+LKAQISA+ +KGKE SKAETEAG+ GP+VTE DIQ IVSAWTGIPVEKVS
Sbjct: 543 AGELRDREMELKAQISAITEKGKEKSKAETEAGETGPLVTEADIQQIVSAWTGIPVEKVS 602
Query: 361 TDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 420
TDESDRL+KMEETLH+RVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS
Sbjct: 603 TDESDRLMKMEETLHQRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 662
Query: 421 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 480
ELAKALAAYYFGSEEAM+RLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT
Sbjct: 663 ELAKALAAYYFGSEEAMVRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 722
Query: 481 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI 540
VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGG I
Sbjct: 723 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGGGI 782
Query: 541 GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 600
GF LDY EKDSSYNRIK+LV EELKQYFRPEFLNRLDE+IVFRQLTK EVKEIADIMLKE
Sbjct: 783 GFQLDYGEKDSSYNRIKTLVNEELKQYFRPEFLNRLDEIIVFRQLTKTEVKEIADIMLKE 842
Query: 601 VFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEG 660
VF+RLK K+I+LQVTERFR+RVV+EGY+PSYGARPLRRAIMRLLEDSMAE+ML+ E+KEG
Sbjct: 843 VFERLKKKEIDLQVTERFRDRVVDEGYSPSYGARPLRRAIMRLLEDSMAERMLSGEVKEG 902
Query: 661 DSVIVDVDSDGNVTVLNGSSGAPESLADPLP 691
DS I+DVDS+GNVTVLNG++G S + P
Sbjct: 903 DSAIIDVDSEGNVTVLNGTAGTASSSSIEAP 933
>gi|293332601|ref|NP_001169540.1| uncharacterized protein LOC100383416 [Zea mays]
gi|224029989|gb|ACN34070.1| unknown [Zea mays]
gi|413916758|gb|AFW56690.1| cytokinin inducible protease1 [Zea mays]
Length = 921
Score = 1263 bits (3268), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 628/689 (91%), Positives = 669/689 (97%), Gaps = 1/689 (0%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
M+GE+TEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR
Sbjct: 230 MIGETTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 289
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNPCLIGEPGVGKTAIAEGLAQRI++GDVP+TIEGKKVITLDMGLLVAGTKYRGEFE
Sbjct: 290 RTKNNPCLIGEPGVGKTAIAEGLAQRISTGDVPETIEGKKVITLDMGLLVAGTKYRGEFE 349
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTLD
Sbjct: 350 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLD 409
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRKHIEKDPALERRFQPVKVPEP+VDETI+IL+GLRERYEIHHKLRYTDEAL++AA+LS
Sbjct: 410 EYRKHIEKDPALERRFQPVKVPEPTVDETIEILRGLRERYEIHHKLRYTDEALIAAAKLS 469
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
YQYISDRFLPDKAIDLIDEAGSRVRL+HAQ+PEEAREL+KEL+Q+TK+KNEAVR QDFEK
Sbjct: 470 YQYISDRFLPDKAIDLIDEAGSRVRLQHAQVPEEARELDKELKQVTKQKNEAVRSQDFEK 529
Query: 301 AGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVS 360
AGELRDREM+LKAQI+AL+DK KE+SKAE E+G+ GP+V E DIQHIVS+WTGIPVEKVS
Sbjct: 530 AGELRDREMELKAQITALIDKSKELSKAEEESGETGPMVNEEDIQHIVSSWTGIPVEKVS 589
Query: 361 TDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 420
+DESD+LLKMEETLHKRVIGQDEAV AISR+IRRARVGLKNPNRPIASFIF+GPTGVGKS
Sbjct: 590 SDESDKLLKMEETLHKRVIGQDEAVVAISRSIRRARVGLKNPNRPIASFIFAGPTGVGKS 649
Query: 421 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 480
ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT
Sbjct: 650 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 709
Query: 481 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI 540
VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR+I
Sbjct: 710 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRKI 769
Query: 541 GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 600
GFDLD DEKDSSY+RIKSLV EE+KQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIML+E
Sbjct: 770 GFDLDSDEKDSSYSRIKSLVIEEMKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLQE 829
Query: 601 VFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEG 660
VFDRLK KDI LQVTE+F+ERVV+EGYNPSYGARPLRRAIMRLLEDS+AEKMLA E+KEG
Sbjct: 830 VFDRLKAKDINLQVTEKFKERVVDEGYNPSYGARPLRRAIMRLLEDSLAEKMLAGEVKEG 889
Query: 661 DSVIVDVDSDGNVTVLNGSSGAPESLADP 689
DS IVDVDS+G V VLNG G PE L+ P
Sbjct: 890 DSAIVDVDSEGKVVVLNGQGGIPE-LSTP 917
>gi|302790788|ref|XP_002977161.1| hypothetical protein SELMODRAFT_176012 [Selaginella moellendorffii]
gi|300155137|gb|EFJ21770.1| hypothetical protein SELMODRAFT_176012 [Selaginella moellendorffii]
Length = 901
Score = 1261 bits (3262), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 630/691 (91%), Positives = 664/691 (96%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
MVGESTEAVGA VGGGSS NKMPTLEEYGTNLTKLAEEGKLDPVVGRQ QIERV QILGR
Sbjct: 207 MVGESTEAVGASVGGGSSSNKMPTLEEYGTNLTKLAEEGKLDPVVGRQQQIERVTQILGR 266
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNPCLIGEPGVGKTAIAEGLAQRIA+GDVP+TIEGKKV+TLDMGLLVAGTKYRGEFE
Sbjct: 267 RTKNNPCLIGEPGVGKTAIAEGLAQRIATGDVPETIEGKKVVTLDMGLLVAGTKYRGEFE 326
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
ERLKKLMEEIKQSD+IIL IDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATT+D
Sbjct: 327 ERLKKLMEEIKQSDDIILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTID 386
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRKHIEKDPALERRFQPV VPEP+VDETIQILKGLRERYEIHHKLRYTDEALV+AAQLS
Sbjct: 387 EYRKHIEKDPALERRFQPVNVPEPTVDETIQILKGLRERYEIHHKLRYTDEALVAAAQLS 446
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEAR+L+KELRQITKEKNEAVRGQDFEK
Sbjct: 447 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARDLDKELRQITKEKNEAVRGQDFEK 506
Query: 301 AGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVS 360
AGELRDREM+LKAQISA+ +KGKE SKAETEAG+ GP+VTE DIQ IVSAWTGIPVEKVS
Sbjct: 507 AGELRDREMELKAQISAITEKGKEKSKAETEAGETGPLVTEADIQQIVSAWTGIPVEKVS 566
Query: 361 TDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 420
TDESDRL+KMEETLH+RVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS
Sbjct: 567 TDESDRLMKMEETLHQRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 626
Query: 421 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 480
ELAKALAAYYFGSEEAM+RLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT
Sbjct: 627 ELAKALAAYYFGSEEAMVRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 686
Query: 481 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI 540
VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGG I
Sbjct: 687 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGGGI 746
Query: 541 GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 600
GF LDY EKDSSYNRIK+LV EELKQYFRPEFLNRLDE+IVFRQLTK EVKEIADIMLKE
Sbjct: 747 GFQLDYGEKDSSYNRIKTLVNEELKQYFRPEFLNRLDEIIVFRQLTKTEVKEIADIMLKE 806
Query: 601 VFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEG 660
VF+RLK K+I+LQVTERFR+RVV+EGY+PSYGARPLRRAIMRLLEDSMAE+ML+ E+KEG
Sbjct: 807 VFERLKKKEIDLQVTERFRDRVVDEGYSPSYGARPLRRAIMRLLEDSMAERMLSGEVKEG 866
Query: 661 DSVIVDVDSDGNVTVLNGSSGAPESLADPLP 691
DS I+DVDS+GNVTVLNG++G S + P
Sbjct: 867 DSAIIDVDSEGNVTVLNGTAGTASSSSIEAP 897
>gi|357160412|ref|XP_003578756.1| PREDICTED: chaperone protein ClpC2, chloroplastic-like
[Brachypodium distachyon]
Length = 920
Score = 1260 bits (3261), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 627/693 (90%), Positives = 671/693 (96%), Gaps = 3/693 (0%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
M+GE+TEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR
Sbjct: 229 MIGETTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 288
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNPCLIGEPGVGKTAIAEGLAQRI+SGDVP+TIEGKKVITLDMGLLVAGTKYRGEFE
Sbjct: 289 RTKNNPCLIGEPGVGKTAIAEGLAQRISSGDVPETIEGKKVITLDMGLLVAGTKYRGEFE 348
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTLD
Sbjct: 349 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLD 408
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRKH+EKDPALERRFQPVKVPEPSVDETI+IL+GL+ERYEIHHKLRYTD+AL++AA+LS
Sbjct: 409 EYRKHVEKDPALERRFQPVKVPEPSVDETIEILRGLQERYEIHHKLRYTDDALIAAAKLS 468
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
YQYISDRFLPDKAIDLIDEAGSRVRLRHAQ+PEEAREL+KEL+QITK+KNEAVRGQDFEK
Sbjct: 469 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQVPEEARELDKELKQITKDKNEAVRGQDFEK 528
Query: 301 AGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVS 360
AGELRDREM+LKAQI+AL+DK KEM KAET++G+ GP+VTE DIQHIVS+WTGIPVEKVS
Sbjct: 529 AGELRDREMELKAQITALIDKSKEMIKAETDSGETGPMVTEADIQHIVSSWTGIPVEKVS 588
Query: 361 TDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 420
TDESD+LLKMEETLHKRVIGQDEAVKAISR++RRARVGLKNPNRPIASFIF+GPTGVGKS
Sbjct: 589 TDESDKLLKMEETLHKRVIGQDEAVKAISRSVRRARVGLKNPNRPIASFIFAGPTGVGKS 648
Query: 421 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 480
ELAKALA+YYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY+
Sbjct: 649 ELAKALASYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYS 708
Query: 481 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI 540
VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR+I
Sbjct: 709 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRKI 768
Query: 541 GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 600
GFDLD DEKDSSY RIKSLV EE+KQYFRPEFLNRLDEMIVFRQLTKLEVK+IA+IML E
Sbjct: 769 GFDLDSDEKDSSYGRIKSLVVEEMKQYFRPEFLNRLDEMIVFRQLTKLEVKDIAEIMLLE 828
Query: 601 VFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEG 660
VF+RLK K+I LQVTE+F+ERVV+EGYNPSYGARPLRRAIMRLLEDS+AEK+LA E+KEG
Sbjct: 829 VFNRLKAKEINLQVTEKFKERVVDEGYNPSYGARPLRRAIMRLLEDSLAEKILAGEVKEG 888
Query: 661 DSVIVDVDSDGNVTVLNGSSGAPESLADPLPVV 693
DS IVDVDS+G V VLNG SG PE P P V
Sbjct: 889 DSAIVDVDSEGKVIVLNGESGLPEL---PTPAV 918
>gi|326514880|dbj|BAJ99801.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 920
Score = 1255 bits (3248), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 623/693 (89%), Positives = 670/693 (96%), Gaps = 3/693 (0%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
M+GE+TEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGR+PQIERVVQILGR
Sbjct: 229 MIGETTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGREPQIERVVQILGR 288
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNPCLIGEPGVGKTAIAEGLAQRI++GDVP+TIEGKKVITLDMGLLVAGTKYRGEFE
Sbjct: 289 RTKNNPCLIGEPGVGKTAIAEGLAQRISNGDVPETIEGKKVITLDMGLLVAGTKYRGEFE 348
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTLD
Sbjct: 349 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLD 408
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRKH+EKDPALERRFQPVKVPEP+VDETI+IL+GLRERYEIHHKLRYTD++L++AA+LS
Sbjct: 409 EYRKHVEKDPALERRFQPVKVPEPTVDETIEILRGLRERYEIHHKLRYTDDSLIAAAKLS 468
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
YQYISDRFLPDKAIDLIDEAGSRVRLRHAQ+PEEAREL+KEL+QITK+KNEAVRGQDFEK
Sbjct: 469 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQVPEEARELDKELKQITKDKNEAVRGQDFEK 528
Query: 301 AGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVS 360
AGELRDREM+LKAQI+ L+DK KEM+KAETE+G+ GP+V E DIQHIVS+WTGIPVEKVS
Sbjct: 529 AGELRDREMELKAQITTLIDKSKEMTKAETESGETGPMVNESDIQHIVSSWTGIPVEKVS 588
Query: 361 TDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 420
TDESD+LLKMEETLHKRVIGQDEAVKAISR++RRARVGLK+PNRPIASFIF+GPTGVGKS
Sbjct: 589 TDESDKLLKMEETLHKRVIGQDEAVKAISRSVRRARVGLKSPNRPIASFIFAGPTGVGKS 648
Query: 421 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 480
ELAK LA+YYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY+
Sbjct: 649 ELAKTLASYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYS 708
Query: 481 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI 540
VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR+I
Sbjct: 709 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRKI 768
Query: 541 GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 600
GFDLD DEKDSSY RIKSLV EE+KQYFRPEFLNRLDEMIVFRQLTKLEVKEIA+IML+E
Sbjct: 769 GFDLDSDEKDSSYGRIKSLVVEEMKQYFRPEFLNRLDEMIVFRQLTKLEVKEIANIMLQE 828
Query: 601 VFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEG 660
VF RLK+KDI LQVTE+F+ERVV+EGYNPSYGARPLRRAIMRLLEDS+AEK+L E+KEG
Sbjct: 829 VFTRLKSKDINLQVTEKFKERVVDEGYNPSYGARPLRRAIMRLLEDSLAEKILGGEVKEG 888
Query: 661 DSVIVDVDSDGNVTVLNGSSGAPESLADPLPVV 693
DSVIVDVDS+G V VLNG SG PE P P V
Sbjct: 889 DSVIVDVDSEGKVIVLNGESGLPEL---PTPAV 918
>gi|1168972|sp|P46523.1|CLPA_BRANA RecName: Full=ATP-dependent Clp protease ATP-binding subunit clpA
homolog, chloroplastic; Flags: Precursor
gi|406311|emb|CAA53077.1| clpA [Brassica napus]
Length = 874
Score = 1253 bits (3241), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 627/696 (90%), Positives = 658/696 (94%), Gaps = 7/696 (1%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
MVGE+ E V A VGGGS NKMPTLEEYGTNLTKLAEEGKLDPVVGR PQIERVVQILGR
Sbjct: 181 MVGENNE-VTANVGGGSGTNKMPTLEEYGTNLTKLAEEGKLDPVVGRHPQIERVVQILGR 239
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNPCLIGEPGVGKTAIAEGLAQRIASG V +T EGKKVITLDMGLL AGTKYRGEFE
Sbjct: 240 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGVVRETSEGKKVITLDMGLLAAGTKYRGEFE 299
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
ER+KKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTLD
Sbjct: 300 ERVKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLD 359
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRKHIEKDPALERRFQPVKVPEP+VDETIQILKGLRERYEIHHKLRYTDE+LV+AAQLS
Sbjct: 360 EYRKHIEKDPALERRFQPVKVPEPTVDETIQILKGLRERYEIHHKLRYTDESLVAAAQLS 419
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
YQYISDRFLPD+AIDL+DEAGSRVRLRHAQ+PEEARELEKELRQITKE NEAVRGQDFEK
Sbjct: 420 YQYISDRFLPDRAIDLMDEAGSRVRLRHAQVPEEARELEKELRQITKE-NEAVRGQDFEK 478
Query: 301 AGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVS 360
AG LRDRE++L+A++SA+ KGKEMSKAE+E GD GP+VTE DIQHIVS+WTGI VEKVS
Sbjct: 479 AGTLRDREIELRAEVSAIQAKGKEMSKAESETGDEGPMVTESDIQHIVSSWTGILVEKVS 538
Query: 361 TDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 420
TDESD LLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIF GPTGVGKS
Sbjct: 539 TDESDLLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFFGPTGVGKS 598
Query: 421 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 480
ELAKALAAYYFG EEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTE QLTEAVRRRPYT
Sbjct: 599 ELAKALAAYYFGCEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEPPQLTEAVRRRPYT 658
Query: 481 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI 540
VVLFDEIEKAHPDVFNMMLQILEDGRLT+SKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI
Sbjct: 659 VVLFDEIEKAHPDVFNMMLQILEDGRLTNSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI 718
Query: 541 GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 600
GFDLDY EKDSSYNRIKSLVT+ELKQYFRPEFLNRLDEMI+FRQLTKLEVKEIADI+L+E
Sbjct: 719 GFDLDY-EKDSSYNRIKSLVTQELKQYFRPEFLNRLDEMILFRQLTKLEVKEIADILLQE 777
Query: 601 VFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEG 660
+F+RLK K++ELQVTERF+ERVV+EGYNPSYGARPLRRAIMRLLEDSM EKMLAREIKEG
Sbjct: 778 LFERLKKKEVELQVTERFKERVVDEGYNPSYGARPLRRAIMRLLEDSMEEKMLAREIKEG 837
Query: 661 DSVIVDVDSDGNVTVLNGSSGAP----ESLADPLPV 692
DSVIVDVDS+G VTVLNG SG P E D LPV
Sbjct: 838 DSVIVDVDSEGKVTVLNGGSGTPTTSLEEQEDSLPV 873
>gi|334185828|ref|NP_001190035.1| Clp ATPase [Arabidopsis thaliana]
gi|332644946|gb|AEE78467.1| Clp ATPase [Arabidopsis thaliana]
Length = 921
Score = 1243 bits (3216), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 613/699 (87%), Positives = 661/699 (94%), Gaps = 6/699 (0%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
MVGE+ E + GG S +KMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQIL R
Sbjct: 223 MVGENNEVTASVGGGSSGNSKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILAR 282
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVP+TIEGK VITLDMGLLVAGTKYRGEFE
Sbjct: 283 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPETIEGKTVITLDMGLLVAGTKYRGEFE 342
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
ERLKKLMEEI+QSDEIILFIDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATT+D
Sbjct: 343 ERLKKLMEEIRQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTID 402
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRKHIEKDPALERRFQPVKVPEP+V+E IQIL+GLRERYEIHHKLRYTDEALV+AAQLS
Sbjct: 403 EYRKHIEKDPALERRFQPVKVPEPTVEEAIQILQGLRERYEIHHKLRYTDEALVAAAQLS 462
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
+QYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEK+LRQITKEKNEAVR QDFE
Sbjct: 463 HQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKQLRQITKEKNEAVRSQDFEM 522
Query: 301 AGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVS 360
AG RDRE++LKA+I+ ++ +GKE++KAE EA + GP VTE DIQHIV+ WTGIPVEKVS
Sbjct: 523 AGSHRDREIELKAEIANVLSRGKEVAKAENEAEEGGPTVTESDIQHIVATWTGIPVEKVS 582
Query: 361 TDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 420
+DES RLL+ME+TLH RVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS
Sbjct: 583 SDESSRLLQMEQTLHTRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 642
Query: 421 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 480
ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT
Sbjct: 643 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 702
Query: 481 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI 540
+VLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI
Sbjct: 703 LVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI 762
Query: 541 GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 600
GFDLD+DEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE
Sbjct: 763 GFDLDHDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 822
Query: 601 VFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEG 660
V RL+ K+IELQVTERF+ERVV+EG++PSYGARPLRRAIMRLLEDSMAEKML+R+IKEG
Sbjct: 823 VVARLEVKEIELQVTERFKERVVDEGFDPSYGARPLRRAIMRLLEDSMAEKMLSRDIKEG 882
Query: 661 DSVIVDVDSDGNVTVLNGSSG------APESLADPLPVV 693
DSVIVDVD++G+V VL+G++G A E++ DP+P++
Sbjct: 883 DSVIVDVDAEGSVVVLSGTTGRVGGFAAEEAMEDPIPIL 921
>gi|186510816|ref|NP_566912.2| Clp ATPase [Arabidopsis thaliana]
gi|75213256|sp|Q9SXJ7.1|CLPC2_ARATH RecName: Full=Chaperone protein ClpC2, chloroplastic; AltName:
Full=ATP-dependent Clp protease ATP-binding subunit ClpC
homolog 2; AltName: Full=AtClpC; AltName: Full=Casein
lytic proteinase C2; Flags: Precursor
gi|5360574|dbj|BAA82062.1| AtClpC [Arabidopsis thaliana]
gi|332644945|gb|AEE78466.1| Clp ATPase [Arabidopsis thaliana]
Length = 952
Score = 1241 bits (3210), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 613/699 (87%), Positives = 661/699 (94%), Gaps = 6/699 (0%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
MVGE+ E + GG S +KMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQIL R
Sbjct: 254 MVGENNEVTASVGGGSSGNSKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILAR 313
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVP+TIEGK VITLDMGLLVAGTKYRGEFE
Sbjct: 314 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPETIEGKTVITLDMGLLVAGTKYRGEFE 373
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
ERLKKLMEEI+QSDEIILFIDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATT+D
Sbjct: 374 ERLKKLMEEIRQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTID 433
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRKHIEKDPALERRFQPVKVPEP+V+E IQIL+GLRERYEIHHKLRYTDEALV+AAQLS
Sbjct: 434 EYRKHIEKDPALERRFQPVKVPEPTVEEAIQILQGLRERYEIHHKLRYTDEALVAAAQLS 493
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
+QYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEK+LRQITKEKNEAVR QDFE
Sbjct: 494 HQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKQLRQITKEKNEAVRSQDFEM 553
Query: 301 AGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVS 360
AG RDRE++LKA+I+ ++ +GKE++KAE EA + GP VTE DIQHIV+ WTGIPVEKVS
Sbjct: 554 AGSHRDREIELKAEIANVLSRGKEVAKAENEAEEGGPTVTESDIQHIVATWTGIPVEKVS 613
Query: 361 TDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 420
+DES RLL+ME+TLH RVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS
Sbjct: 614 SDESSRLLQMEQTLHTRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 673
Query: 421 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 480
ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT
Sbjct: 674 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 733
Query: 481 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI 540
+VLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI
Sbjct: 734 LVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI 793
Query: 541 GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 600
GFDLD+DEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE
Sbjct: 794 GFDLDHDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 853
Query: 601 VFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEG 660
V RL+ K+IELQVTERF+ERVV+EG++PSYGARPLRRAIMRLLEDSMAEKML+R+IKEG
Sbjct: 854 VVARLEVKEIELQVTERFKERVVDEGFDPSYGARPLRRAIMRLLEDSMAEKMLSRDIKEG 913
Query: 661 DSVIVDVDSDGNVTVLNGSSG------APESLADPLPVV 693
DSVIVDVD++G+V VL+G++G A E++ DP+P++
Sbjct: 914 DSVIVDVDAEGSVVVLSGTTGRVGGFAAEEAMEDPIPIL 952
>gi|7576225|emb|CAB87915.1| AtClpC [Arabidopsis thaliana]
Length = 952
Score = 1239 bits (3205), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 612/699 (87%), Positives = 661/699 (94%), Gaps = 6/699 (0%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
MVGE+ E + GG S +KMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIER+VQIL R
Sbjct: 254 MVGENNEVTASVGGGSSGNSKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERMVQILAR 313
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVP+TIEGK VITLDMGLLVAGTKYRGEFE
Sbjct: 314 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPETIEGKTVITLDMGLLVAGTKYRGEFE 373
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
ERLKKLMEEI+QSDEIILFIDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATT+D
Sbjct: 374 ERLKKLMEEIRQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTID 433
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRKHIEKDPALERRFQPVKVPEP+V+E IQIL+GLRERYEIHHKLRYTDEALV+AAQLS
Sbjct: 434 EYRKHIEKDPALERRFQPVKVPEPTVEEAIQILQGLRERYEIHHKLRYTDEALVAAAQLS 493
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
+QYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEK+LRQITKEKNEAVR QDFE
Sbjct: 494 HQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKQLRQITKEKNEAVRSQDFEM 553
Query: 301 AGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVS 360
AG RDRE++LKA+I+ ++ +GKE++KAE EA + GP VTE DIQHIV+ WTGIPVEKVS
Sbjct: 554 AGSHRDREIELKAEIANVLSRGKEVAKAENEAEEGGPTVTESDIQHIVATWTGIPVEKVS 613
Query: 361 TDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 420
+DES RLL+ME+TLH RVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS
Sbjct: 614 SDESSRLLQMEQTLHTRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 673
Query: 421 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 480
ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT
Sbjct: 674 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 733
Query: 481 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI 540
+VLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI
Sbjct: 734 LVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI 793
Query: 541 GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 600
GFDLD+DEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE
Sbjct: 794 GFDLDHDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 853
Query: 601 VFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEG 660
V RL+ K+IELQVTERF+ERVV+EG++PSYGARPLRRAIMRLLEDSMAEKML+R+IKEG
Sbjct: 854 VVARLEVKEIELQVTERFKERVVDEGFDPSYGARPLRRAIMRLLEDSMAEKMLSRDIKEG 913
Query: 661 DSVIVDVDSDGNVTVLNGSSG------APESLADPLPVV 693
DSVIVDVD++G+V VL+G++G A E++ DP+P++
Sbjct: 914 DSVIVDVDAEGSVVVLSGTTGRVGGFAAEEAMEDPIPIL 952
>gi|222616839|gb|EEE52971.1| hypothetical protein OsJ_35634 [Oryza sativa Japonica Group]
Length = 832
Score = 1238 bits (3204), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 621/692 (89%), Positives = 665/692 (96%), Gaps = 7/692 (1%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
M+GE+TEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR
Sbjct: 141 MIGETTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 200
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNPCLIGEPGVGKTAIAEGLAQRI++GDVP+TIEGKKVITLDMGLLVAGTKYRGEFE
Sbjct: 201 RTKNNPCLIGEPGVGKTAIAEGLAQRISTGDVPETIEGKKVITLDMGLLVAGTKYRGEFE 260
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTLD
Sbjct: 261 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLD 320
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRKHIEKDPALERRFQPV+VPEP+VDETI+IL+GLRERYEIHHKLRYTD+AL+SAA+LS
Sbjct: 321 EYRKHIEKDPALERRFQPVRVPEPTVDETIEILRGLRERYEIHHKLRYTDDALISAAKLS 380
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
YQYISDRFLPDKAIDLIDEAGSRVRLRHAQ+PEEAREL+KEL+QITK+KNEAVR QDFEK
Sbjct: 381 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQVPEEARELDKELKQITKDKNEAVRSQDFEK 440
Query: 301 AGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVS 360
AGELRDREM+LKAQI+AL+DK KEMSKAETE+G+ GP+V E DIQHIVS+WTGIPVEKVS
Sbjct: 441 AGELRDREMELKAQITALIDKSKEMSKAETESGETGPLVNEADIQHIVSSWTGIPVEKVS 500
Query: 361 TDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 420
+DESD+LLKMEETLH+RVIGQDEAVKAISR+IRRARVGLKNPNRPIASFIF+GPTGVGKS
Sbjct: 501 SDESDKLLKMEETLHQRVIGQDEAVKAISRSIRRARVGLKNPNRPIASFIFAGPTGVGKS 560
Query: 421 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 480
ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT
Sbjct: 561 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 620
Query: 481 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI 540
VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR+I
Sbjct: 621 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRKI 680
Query: 541 GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 600
GFDLDYDEKDSSY+RIKSLV EE+KQYFRPEFLNRLDEMIVFRQLTKLEVKEIA+IMLKE
Sbjct: 681 GFDLDYDEKDSSYSRIKSLVVEEMKQYFRPEFLNRLDEMIVFRQLTKLEVKEIAEIMLKE 740
Query: 601 VFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEG 660
VFDRLK KDI+LQVTE+F+ER+V+EG+NPSYGARPLRRAIMRLLEDS+AEKMLA E+K
Sbjct: 741 VFDRLKAKDIDLQVTEKFKERIVDEGFNPSYGARPLRRAIMRLLEDSLAEKMLAGEVKR- 799
Query: 661 DSVIVDVD---SDGNVTVLNGSSGAPESLADP 689
VI+ + G V LN SG PE L+ P
Sbjct: 800 --VILPLSMWIPQGKVIELNAQSGFPE-LSTP 828
>gi|297819504|ref|XP_002877635.1| AtClpC [Arabidopsis lyrata subsp. lyrata]
gi|297323473|gb|EFH53894.1| AtClpC [Arabidopsis lyrata subsp. lyrata]
Length = 953
Score = 1236 bits (3197), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 613/700 (87%), Positives = 659/700 (94%), Gaps = 7/700 (1%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
MVGE+ E + GG S +KMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQIL R
Sbjct: 254 MVGENNEVTASVGGGSSGNSKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILAR 313
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVP+TIEGK VITLDMGLLVAGTKYRGEFE
Sbjct: 314 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPETIEGKTVITLDMGLLVAGTKYRGEFE 373
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
ERLKKLMEEI+QSDEIILFIDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTLD
Sbjct: 374 ERLKKLMEEIRQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLD 433
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRKHIEKDPALERRFQPVKVPEP+V+E IQIL GLRERYEIHHKLRYTDEALV+AAQLS
Sbjct: 434 EYRKHIEKDPALERRFQPVKVPEPTVEEAIQILHGLRERYEIHHKLRYTDEALVAAAQLS 493
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
+QYISDRFLPDKAIDLIDEAGSRVRLRHAQ+PEEARELEK+LRQITKEKNEAVRGQDFE
Sbjct: 494 HQYISDRFLPDKAIDLIDEAGSRVRLRHAQVPEEARELEKQLRQITKEKNEAVRGQDFEM 553
Query: 301 AGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVS 360
AG RDRE++L+A+I+ ++ GKE++KAE EA + GP VTE DIQHIV+ WTGIPVEKVS
Sbjct: 554 AGSHRDREIELRAEIANVLALGKEVAKAENEAEEGGPTVTESDIQHIVATWTGIPVEKVS 613
Query: 361 TDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 420
+DES RLL+ME+TLH RVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS
Sbjct: 614 SDESSRLLQMEQTLHTRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 673
Query: 421 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 480
ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT
Sbjct: 674 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 733
Query: 481 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI 540
+VLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI
Sbjct: 734 LVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI 793
Query: 541 GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 600
GFDLD+DEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE
Sbjct: 794 GFDLDHDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 853
Query: 601 VFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEG 660
V RL+ K+IELQVTERF+ERVV+EG++PSYGARPLRRAIMRLLEDSMAEKML+R+IKEG
Sbjct: 854 VVARLEDKEIELQVTERFKERVVDEGFDPSYGARPLRRAIMRLLEDSMAEKMLSRDIKEG 913
Query: 661 DSVIVDVDSDGNVTVLNGSSG-------APESLADPLPVV 693
DSVIVDVD++G+V VL+G++ A E++ DP+PV+
Sbjct: 914 DSVIVDVDAEGSVVVLSGNNSGRAGGFTAEEAMEDPIPVL 953
>gi|168028746|ref|XP_001766888.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162681867|gb|EDQ68290.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 836
Score = 1235 bits (3196), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 612/681 (89%), Positives = 651/681 (95%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
MVGE+TEAVG G GSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGR QIERV QILGR
Sbjct: 141 MVGENTEAVGVRSGSGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRISQIERVTQILGR 200
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNPCLIGEPGVGKTA+AEGLAQRIASGDVP+TIEGK V+TLDMGLLVAGTKYRGEFE
Sbjct: 201 RTKNNPCLIGEPGVGKTAVAEGLAQRIASGDVPETIEGKNVVTLDMGLLVAGTKYRGEFE 260
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
ERLKKLMEEIKQ+D+IIL IDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTLD
Sbjct: 261 ERLKKLMEEIKQADDIILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLD 320
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRKHIEKDPALERRFQPV VPEP+V+ETI+IL+GLRERYEIHHKLRYTDEAL++AAQLS
Sbjct: 321 EYRKHIEKDPALERRFQPVLVPEPTVEETIEILRGLRERYEIHHKLRYTDEALIAAAQLS 380
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
YQYISDRFLPDKAIDLIDEAGS+VRL+HAQLPEEA+EL+KELR +TKEKNEAVRGQDFEK
Sbjct: 381 YQYISDRFLPDKAIDLIDEAGSKVRLKHAQLPEEAKELDKELRAVTKEKNEAVRGQDFEK 440
Query: 301 AGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVS 360
AGELRDREM+LKAQISA ++K KE KAE+E GDVGP V E DIQ IVSAWTGIPVEKVS
Sbjct: 441 AGELRDREMELKAQISAFIEKDKEKVKAESETGDVGPTVEEADIQQIVSAWTGIPVEKVS 500
Query: 361 TDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 420
+DESDRLLKME+TLH RVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS
Sbjct: 501 SDESDRLLKMEDTLHNRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 560
Query: 421 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 480
ELAK+LA+YYFGSEEAM+RLDMSEFMERHTVSKLIGSPPGYVGY+EGGQLTEAVRRRPYT
Sbjct: 561 ELAKSLASYYFGSEEAMVRLDMSEFMERHTVSKLIGSPPGYVGYSEGGQLTEAVRRRPYT 620
Query: 481 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI 540
VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGG I
Sbjct: 621 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGGGI 680
Query: 541 GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 600
GF LDY EKDSSYNRIKSLV EELKQYFRPEFLNRLDE+IVFRQLTKLEVKEIADIMLKE
Sbjct: 681 GFQLDYGEKDSSYNRIKSLVNEELKQYFRPEFLNRLDEIIVFRQLTKLEVKEIADIMLKE 740
Query: 601 VFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEG 660
VF+RLK K+I+LQVTERFR+RVVEEGY+PSYGARPLRRAIMRLLEDSMAE+ML+ EIKEG
Sbjct: 741 VFERLKKKEIDLQVTERFRDRVVEEGYSPSYGARPLRRAIMRLLEDSMAERMLSGEIKEG 800
Query: 661 DSVIVDVDSDGNVTVLNGSSG 681
DS I+DVD DGNVTVLNG++G
Sbjct: 801 DSAIIDVDGDGNVTVLNGTTG 821
>gi|168026983|ref|XP_001766010.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682653|gb|EDQ69069.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 836
Score = 1234 bits (3194), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 614/681 (90%), Positives = 653/681 (95%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
MVGE+TEAVG G G GSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGR QIERV QILGR
Sbjct: 141 MVGENTEAVGVGAGSGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRVAQIERVTQILGR 200
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNPCLIGEPGVGKTA+AEGLAQRIASGDVP+TIEGKKVITLDMGLLVAGTKYRGEFE
Sbjct: 201 RTKNNPCLIGEPGVGKTAVAEGLAQRIASGDVPETIEGKKVITLDMGLLVAGTKYRGEFE 260
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
ERLKKLMEEIKQ+D+IIL IDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTLD
Sbjct: 261 ERLKKLMEEIKQADDIILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLD 320
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRKHIEKDPALERRFQPV VPEP+V+ETI+IL+GLRERYEIHHKLRYTDEAL++AAQLS
Sbjct: 321 EYRKHIEKDPALERRFQPVLVPEPTVEETIEILRGLRERYEIHHKLRYTDEALIAAAQLS 380
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
YQYISDRFLPDKAIDLIDEAGS+VRL+HAQLPEEA+EL+KELR +TKEKNEAVRGQDFEK
Sbjct: 381 YQYISDRFLPDKAIDLIDEAGSKVRLKHAQLPEEAKELDKELRAVTKEKNEAVRGQDFEK 440
Query: 301 AGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVS 360
AGELRDREM+LKAQISA ++K KE KAE+E GDVGP V E DIQ IVSAWTGIPVEKVS
Sbjct: 441 AGELRDREMELKAQISAFIEKDKEQMKAESETGDVGPTVEESDIQQIVSAWTGIPVEKVS 500
Query: 361 TDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 420
+DESDRLLKME+TLH RVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS
Sbjct: 501 SDESDRLLKMEDTLHNRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 560
Query: 421 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 480
ELAK+LA+YYFGSEEAM+RLDMSEFMERHTVSKLIGSPPGYVGY+EGGQLTEAVRRRPYT
Sbjct: 561 ELAKSLASYYFGSEEAMVRLDMSEFMERHTVSKLIGSPPGYVGYSEGGQLTEAVRRRPYT 620
Query: 481 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI 540
VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGG I
Sbjct: 621 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGGGI 680
Query: 541 GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 600
GF LDY EKDSSYNRIKSLV EELKQYFRPEFLNRLDE+IVFRQLTKLEVKEIADIMLKE
Sbjct: 681 GFQLDYGEKDSSYNRIKSLVNEELKQYFRPEFLNRLDEIIVFRQLTKLEVKEIADIMLKE 740
Query: 601 VFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEG 660
VF+RLK K+I+LQVTERFR+RVV+EGY+PSYGARPLRRAIMRLLEDSMAE+ML+ EIKEG
Sbjct: 741 VFERLKKKEIDLQVTERFRDRVVDEGYSPSYGARPLRRAIMRLLEDSMAERMLSGEIKEG 800
Query: 661 DSVIVDVDSDGNVTVLNGSSG 681
DS I+DVD DGNVTVLNG++G
Sbjct: 801 DSAIIDVDGDGNVTVLNGTTG 821
>gi|168007899|ref|XP_001756645.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692241|gb|EDQ78599.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 933
Score = 1233 bits (3191), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 612/676 (90%), Positives = 648/676 (95%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
MVGE+TEAVG G G GSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGR QIERV QILGR
Sbjct: 238 MVGENTEAVGVGGGSGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRVAQIERVTQILGR 297
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNPCLIGEPGVGKTA+AEGLAQRIASGDVP+TIEGKKVITLDMGLLVAGTKYRGEFE
Sbjct: 298 RTKNNPCLIGEPGVGKTAVAEGLAQRIASGDVPETIEGKKVITLDMGLLVAGTKYRGEFE 357
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
ERLKKLMEEIKQ+D+IIL IDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTLD
Sbjct: 358 ERLKKLMEEIKQADDIILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLD 417
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRKHIEKDPALERRFQPV VPEP+V+ETI ILKGLRERYEIHHKLRYTDEALV+AAQLS
Sbjct: 418 EYRKHIEKDPALERRFQPVLVPEPTVEETIDILKGLRERYEIHHKLRYTDEALVAAAQLS 477
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
YQYISDRFLPDKAIDLIDEAGS+VRL+HAQLPEEAREL+K+LR +TKEKNEAVRGQDFEK
Sbjct: 478 YQYISDRFLPDKAIDLIDEAGSKVRLKHAQLPEEARELDKQLRAVTKEKNEAVRGQDFEK 537
Query: 301 AGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVS 360
AGELRD+EM+LKAQISA ++KGKE KAE+E GDVGP V E DIQ IV+AWTGIP+EKVS
Sbjct: 538 AGELRDKEMELKAQISAFIEKGKEQMKAESETGDVGPTVEESDIQQIVAAWTGIPMEKVS 597
Query: 361 TDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 420
+DESDRLLKME+TLH RVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS
Sbjct: 598 SDESDRLLKMEDTLHTRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 657
Query: 421 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 480
ELAKALA+YYFGSEEAM+RLDMSEFMERHTVSKLIGSPPGYVGY+EGGQLTEAVRRRPYT
Sbjct: 658 ELAKALASYYFGSEEAMVRLDMSEFMERHTVSKLIGSPPGYVGYSEGGQLTEAVRRRPYT 717
Query: 481 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI 540
VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGG I
Sbjct: 718 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGGGI 777
Query: 541 GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 600
GF LDY EKDSSYNRIKSLV EELKQYFRPEFLNRLDE+IVFRQLTKLEVKEIADIMLKE
Sbjct: 778 GFQLDYGEKDSSYNRIKSLVNEELKQYFRPEFLNRLDEIIVFRQLTKLEVKEIADIMLKE 837
Query: 601 VFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEG 660
VF+RLK K+I+LQVTERFR+RVV+EGY+PSYGARPLRRAIMRLLEDSMAE+ML+ EIKEG
Sbjct: 838 VFERLKKKEIDLQVTERFRDRVVDEGYSPSYGARPLRRAIMRLLEDSMAERMLSGEIKEG 897
Query: 661 DSVIVDVDSDGNVTVL 676
DS I+DVD DGNVTVL
Sbjct: 898 DSAIIDVDGDGNVTVL 913
>gi|168053476|ref|XP_001779162.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669421|gb|EDQ56008.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 922
Score = 1224 bits (3167), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 603/672 (89%), Positives = 641/672 (95%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
MVGE+ EAVG G G GS NKMPTLEEYGTNLTKLAEEGKLDPVVGR QIERV QILGR
Sbjct: 241 MVGENNEAVGVGGGSGSGSNKMPTLEEYGTNLTKLAEEGKLDPVVGRVAQIERVTQILGR 300
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNPCLIGEPGVGKTA+AEGLAQRIASGDVP+TIEGKKVITLDMGLLVAGTKYRGEFE
Sbjct: 301 RTKNNPCLIGEPGVGKTAVAEGLAQRIASGDVPETIEGKKVITLDMGLLVAGTKYRGEFE 360
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
ERLKKLMEEIKQ+D+IIL IDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTLD
Sbjct: 361 ERLKKLMEEIKQADDIILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLD 420
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRKHIEKDPALERRFQPV VPEP+V+ETI+ILKGLRERYEIHHKLRYTDEAL++AAQLS
Sbjct: 421 EYRKHIEKDPALERRFQPVLVPEPTVEETIEILKGLRERYEIHHKLRYTDEALIAAAQLS 480
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
YQYISDRFLPDKAIDLIDEAGS+VRL+HAQLPEEAREL+K+LR +TKEKNEAVRGQDFEK
Sbjct: 481 YQYISDRFLPDKAIDLIDEAGSKVRLKHAQLPEEARELDKQLRAVTKEKNEAVRGQDFEK 540
Query: 301 AGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVS 360
AGELRD+EM+LKAQIS ++KGKE KAE+E GDVGP V E DIQ IV+AWTGIP+EKVS
Sbjct: 541 AGELRDKEMELKAQISVFIEKGKEQMKAESETGDVGPTVEESDIQQIVAAWTGIPMEKVS 600
Query: 361 TDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 420
+DESDRLLKME+TLH RVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS
Sbjct: 601 SDESDRLLKMEDTLHNRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 660
Query: 421 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 480
ELAKALA+YYFGSEEAM+RLDMSEFMERHTVSKLIGSPPGYVGY+EGGQLTEAVRRRPYT
Sbjct: 661 ELAKALASYYFGSEEAMVRLDMSEFMERHTVSKLIGSPPGYVGYSEGGQLTEAVRRRPYT 720
Query: 481 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI 540
VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGG I
Sbjct: 721 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGGGI 780
Query: 541 GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 600
GF LDY EKDSSYNRIKSLV EELKQYFRPEFLNRLDE+IVFRQLTKLEVKEIADIMLKE
Sbjct: 781 GFQLDYGEKDSSYNRIKSLVNEELKQYFRPEFLNRLDEIIVFRQLTKLEVKEIADIMLKE 840
Query: 601 VFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEG 660
VF+RLK K+I+LQVTERFR+RVV+EGY+PSYGARPLRRAIMRLLEDSMAE+ML+ EIKEG
Sbjct: 841 VFERLKKKEIDLQVTERFRDRVVDEGYSPSYGARPLRRAIMRLLEDSMAERMLSGEIKEG 900
Query: 661 DSVIVDVDSDGN 672
DS I+DVDSD N
Sbjct: 901 DSAIIDVDSDAN 912
>gi|4105131|gb|AAD02267.1| ClpC protease [Spinacia oleracea]
Length = 891
Score = 1216 bits (3147), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 615/658 (93%), Positives = 633/658 (96%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
MVGE+TEAVGAGVGGG++GNKMPTLEEYGTNLTKLAEEGKLDPVVGRQ QIERV QILGR
Sbjct: 230 MVGENTEAVGAGVGGGTTGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQAQIERVTQILGR 289
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNPCLIGEPGVGKTAIAEGLAQRIA+GDVP+TIEGKKVITL MGLLVAGTKYRGEFE
Sbjct: 290 RTKNNPCLIGEPGVGKTAIAEGLAQRIATGDVPETIEGKKVITLHMGLLVAGTKYRGEFE 349
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAID ANILKP RGELQCIGATTLD
Sbjct: 350 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDRANILKPRFRRGELQCIGATTLD 409
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRKHIEKDPALERRFQPVKVPEP+VDETIQILKGLRERYEIHHKLRYTDEALV+AAQLS
Sbjct: 410 EYRKHIEKDPALERRFQPVKVPEPTVDETIQILKGLRERYEIHHKLRYTDEALVAAAQLS 469
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
YQYISDRFLPDKAIDLIDEAGSRV + E + EKELRQ+TKEKNEAVRGQDFEK
Sbjct: 470 YQYISDRFLPDKAIDLIDEAGSRVLPSSLKKLESWLQHEKELRQLTKEKNEAVRGQDFEK 529
Query: 301 AGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVS 360
AGELRDREMDLKAQISALV+K KEMSKAETEAGDVGP+VTE DIQHIVS+WTGIPVEKVS
Sbjct: 530 AGELRDREMDLKAQISALVEKKKEMSKAETEAGDVGPMVTESDIQHIVSSWTGIPVEKVS 589
Query: 361 TDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 420
TDESDRLLKME+TLH RVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS
Sbjct: 590 TDESDRLLKMEDTLHTRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 649
Query: 421 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 480
ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT
Sbjct: 650 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 709
Query: 481 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI 540
VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRT DFKNTLLIMTSNVGSSVIEKGGRRI
Sbjct: 710 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTADFKNTLLIMTSNVGSSVIEKGGRRI 769
Query: 541 GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 600
GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE
Sbjct: 770 GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 829
Query: 601 VFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIK 658
VF RLK K+IELQVTERFR+RVV+EGYNPSYGARPLRRAIMRLLEDSMAEKMLAR+ K
Sbjct: 830 VFGRLKNKEIELQVTERFRDRVVDEGYNPSYGARPLRRAIMRLLEDSMAEKMLARKSK 887
>gi|414587487|tpg|DAA38058.1| TPA: hypothetical protein ZEAMMB73_793135 [Zea mays]
Length = 896
Score = 1180 bits (3052), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 603/687 (87%), Positives = 636/687 (92%), Gaps = 6/687 (0%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
MVGESTEAVGAGVGGGSSG KMPTLEEYGTNLTKLAEE GRQ QIERV QILGR
Sbjct: 209 MVGESTEAVGAGVGGGSSGQKMPTLEEYGTNLTKLAEES-----FGRQDQIERVTQILGR 263
Query: 61 RTKNNPCLIGEPGVGK-TAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 119
RTK P K + GL + G EGKKVITLDMGLLVAGTKYRGEF
Sbjct: 264 RTKKQPLPNWRAWCWKRLLLLRGLLSVLPMGMFLKQFEGKKVITLDMGLLVAGTKYRGEF 323
Query: 120 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 179
EERLKKLMEEIKQ+++IILFIDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTL
Sbjct: 324 EERLKKLMEEIKQNEDIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTL 383
Query: 180 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 239
DEYRKHIEKDPALERRFQPVKVPEP+VDETIQIL+GLRERYE+HHKLRYTD+AL++AAQL
Sbjct: 384 DEYRKHIEKDPALERRFQPVKVPEPTVDETIQILRGLRERYELHHKLRYTDDALIAAAQL 443
Query: 240 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 299
SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLP+EA+EL+KELRQITK+KNEAVRGQDFE
Sbjct: 444 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPDEAKELDKELRQITKQKNEAVRGQDFE 503
Query: 300 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 359
KAGELRDREM+LKAQI+A++DK KEM KAETE+G+VGP+VTE DIQHIVS+WTGIPVEKV
Sbjct: 504 KAGELRDREMELKAQITAIIDKSKEMIKAETESGEVGPLVTEADIQHIVSSWTGIPVEKV 563
Query: 360 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 419
S+DESDRLLKMEETLH R+IGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK
Sbjct: 564 SSDESDRLLKMEETLHTRIIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 623
Query: 420 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 479
SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY
Sbjct: 624 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 683
Query: 480 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 539
TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR+
Sbjct: 684 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRK 743
Query: 540 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 599
IGFDLDYDEKD+SYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK
Sbjct: 744 IGFDLDYDEKDTSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 803
Query: 600 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 659
EVFDRLK KDI LQVTE+FR+RVV+EGYNPSYGARPLRRAIMRLLEDS+AEKMLA E+KE
Sbjct: 804 EVFDRLKAKDINLQVTEKFRDRVVDEGYNPSYGARPLRRAIMRLLEDSLAEKMLAGEVKE 863
Query: 660 GDSVIVDVDSDGNVTVLNGSSGAPESL 686
GDS IVDVDSDG V VLNG SG E L
Sbjct: 864 GDSAIVDVDSDGKVIVLNGGSGVAEPL 890
>gi|307104044|gb|EFN52300.1| hypothetical protein CHLNCDRAFT_32555 [Chlorella variabilis]
Length = 844
Score = 1138 bits (2944), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 561/680 (82%), Positives = 623/680 (91%), Gaps = 2/680 (0%)
Query: 1 MVGESTE-AVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 59
MVGES E GG S NKMPTLEEYGTNLT+ AEEGKLDPVVGR+ +IERV QILG
Sbjct: 147 MVGESQEPVGSTVGGGSSGSNKMPTLEEYGTNLTQQAEEGKLDPVVGRKKEIERVTQILG 206
Query: 60 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 119
RRTKNNPCLIGEPGVGKTA+AEGLAQ+IA+GDVP+TIEGK+V+TLDMGLLVAGTKYRGEF
Sbjct: 207 RRTKNNPCLIGEPGVGKTAVAEGLAQKIATGDVPETIEGKQVVTLDMGLLVAGTKYRGEF 266
Query: 120 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 179
EERLKKLMEEIKQ+D+IIL IDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTL
Sbjct: 267 EERLKKLMEEIKQNDDIILMIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTL 326
Query: 180 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 239
DEYRKHIEKDPALERRFQPV VPEPSV+ET +I+ GLRERYE HHKLRYTDEAL +AA+
Sbjct: 327 DEYRKHIEKDPALERRFQPVHVPEPSVEETYEIMLGLRERYEAHHKLRYTDEALRAAAKY 386
Query: 240 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 299
S QYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEAREL+KELR + KEK+ AVR QDFE
Sbjct: 387 SSQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELDKELRALLKEKDAAVRAQDFE 446
Query: 300 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVG-PVVTEVDIQHIVSAWTGIPVEK 358
KAG LRDREM+LK+QISA+ K+ ++AE E+G+ G P+VTE DI +IV+ WTGIP+EK
Sbjct: 447 KAGSLRDREMELKSQISAITSSAKDSARAEMESGEGGGPMVTEQDIANIVAQWTGIPIEK 506
Query: 359 VSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVG 418
VS+DE++RL+KME+ LH RVIGQ+EAV AISRAIRRARVGLKNP+RPIASFIFSGPTGVG
Sbjct: 507 VSSDETERLVKMEQVLHGRVIGQEEAVTAISRAIRRARVGLKNPSRPIASFIFSGPTGVG 566
Query: 419 KSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRP 478
KSELAK LA+YYFGSEEAM+RLDMSEFMERHTVSKLIGSPPGYVGY EGGQLTEAVRRRP
Sbjct: 567 KSELAKTLASYYFGSEEAMVRLDMSEFMERHTVSKLIGSPPGYVGYNEGGQLTEAVRRRP 626
Query: 479 YTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR 538
YTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTL+I+TSNVGSSVIEKGG
Sbjct: 627 YTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLIILTSNVGSSVIEKGGG 686
Query: 539 RIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIML 598
IGF LD E+DSSYNRIKSLV EELKQYFRPEFLNRLDE+IVFRQLTK EVK+IADIML
Sbjct: 687 GIGFQLDNSEEDSSYNRIKSLVNEELKQYFRPEFLNRLDEIIVFRQLTKQEVKQIADIML 746
Query: 599 KEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIK 658
++VF R + K I++ VTERF++R+V+EGYNP+YGARPLRRAIMRLLEDSMAE+MLA +IK
Sbjct: 747 RQVFKRAEEKGIKIDVTERFKDRLVDEGYNPAYGARPLRRAIMRLLEDSMAERMLAGDIK 806
Query: 659 EGDSVIVDVDSDGNVTVLNG 678
EGDSVI+DVD+DG ++VLNG
Sbjct: 807 EGDSVIIDVDADGQISVLNG 826
>gi|326504928|dbj|BAK06755.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 886
Score = 1130 bits (2923), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 548/665 (82%), Positives = 612/665 (92%), Gaps = 1/665 (0%)
Query: 21 KMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIA 80
KMPTLEEYGTNLTKLA+EGKLDPVVGR+ QIERV+QILGRRTKNNPCLIGEPGVGKTAIA
Sbjct: 214 KMPTLEEYGTNLTKLAQEGKLDPVVGRKKQIERVLQILGRRTKNNPCLIGEPGVGKTAIA 273
Query: 81 EGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFI 140
EGLAQRIA+GDVP+T+EGK VITLDMGLLVAGTKYRGEFEERLKKLMEEIKQ+ +IILF+
Sbjct: 274 EGLAQRIATGDVPETVEGKTVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQNGDIILFL 333
Query: 141 DEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVK 200
DEVHTL+GAGAAEGAIDAANILKP+LARGELQC+GATT+DEYRKHIEKDPALERRFQPVK
Sbjct: 334 DEVHTLVGAGAAEGAIDAANILKPALARGELQCLGATTIDEYRKHIEKDPALERRFQPVK 393
Query: 201 VPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEA 260
VPEP+VDETI ILKGLRERYEIHHKLRYTDEAL++AAQLSYQYISDRFLPDKAIDL+DEA
Sbjct: 394 VPEPTVDETIGILKGLRERYEIHHKLRYTDEALIAAAQLSYQYISDRFLPDKAIDLVDEA 453
Query: 261 GSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVD 320
GS VRLRHA+LP+EA++L+K+L++IT++KN+A+R Q FE A ELR E++LK QI +LVD
Sbjct: 454 GSLVRLRHAKLPDEAKDLDKKLKEITRQKNDAIRSQQFETAAELRSEELELKTQIMSLVD 513
Query: 321 KGKEMSKAETEAG-DVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVI 379
K KE+SKAE E+G GP+VTE DIQ IV++WT +PVEKVS DES RLLKMEETLH RVI
Sbjct: 514 KSKEVSKAEVESGASTGPMVTEADIQRIVASWTSVPVEKVSVDESSRLLKMEETLHGRVI 573
Query: 380 GQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIR 439
GQDEAV+AI RAIRRARVGL+NPNRP+ASFIF+GPTGVGKSELAKALAA Y+GSEEAM+R
Sbjct: 574 GQDEAVRAIGRAIRRARVGLRNPNRPVASFIFAGPTGVGKSELAKALAASYYGSEEAMVR 633
Query: 440 LDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMML 499
LDMSEFMERHTV+KLIGSPPGYVGYTEGGQLTEAVRRRPYTVVL DEIEKAHPDVFN+ML
Sbjct: 634 LDMSEFMERHTVAKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLLDEIEKAHPDVFNLML 693
Query: 500 QILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSL 559
QI+EDGRLTDS+GRTVDFKNTL+IMTSNVGSSVIEKGG+++GFD D E +SY RIKSL
Sbjct: 694 QIMEDGRLTDSRGRTVDFKNTLIIMTSNVGSSVIEKGGKQLGFDHDDGEARNSYGRIKSL 753
Query: 560 VTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFR 619
V EE+KQYFRPEFLNRLDEMIVFRQLTK+EVKEIA IML EV R++TK IEL VTE F+
Sbjct: 754 VDEEMKQYFRPEFLNRLDEMIVFRQLTKMEVKEIAAIMLDEVAGRMRTKGIELLVTESFK 813
Query: 620 ERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNGS 679
E VVEEGY+PSYGARPLRRAIMRLLED +A+KMLA ++KEGD VIVD D GNV VL+
Sbjct: 814 ELVVEEGYDPSYGARPLRRAIMRLLEDKLADKMLAEDVKEGDGVIVDADPAGNVVVLSRH 873
Query: 680 SGAPE 684
S PE
Sbjct: 874 SDLPE 878
>gi|384250946|gb|EIE24424.1| hypothetical protein COCSUDRAFT_28166 [Coccomyxa subellipsoidea
C-169]
Length = 849
Score = 1126 bits (2913), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 571/690 (82%), Positives = 621/690 (90%), Gaps = 12/690 (1%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
MVGES + V G G GSS NKMPTLEEYGTNLT A EGKLDPVVGR+ +IERV QILGR
Sbjct: 144 MVGESQDTVTVGGGSGSSSNKMPTLEEYGTNLTTQATEGKLDPVVGRKKEIERVTQILGR 203
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNPCLIGEPGVGKTA+AEGLAQ+IA+GDVP+TIEGK+VITLDMGLLVAGTKYRGEFE
Sbjct: 204 RTKNNPCLIGEPGVGKTAVAEGLAQKIANGDVPETIEGKQVITLDMGLLVAGTKYRGEFE 263
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
ERLKKLMEEIKQ+D+IIL IDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTLD
Sbjct: 264 ERLKKLMEEIKQNDDIILMIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLD 323
Query: 181 EYRKHIEKDPALERRFQP----------VKVPEPSVDETIQILKGLRERYEIHHKLRYTD 230
EYRKHIEKDPALERRFQP VPEP+VDET QIL GLRERYE HHKLRYTD
Sbjct: 324 EYRKHIEKDPALERRFQPQARLIMCFLCAHVPEPTVDETYQILLGLRERYEAHHKLRYTD 383
Query: 231 EALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKN 290
EAL +AA+ S QYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEAR+L+KELR + KEK+
Sbjct: 384 EALDAAAKFSSQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARDLDKELRALLKEKD 443
Query: 291 EAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVG--PVVTEVDIQHIV 348
AVRGQDFEKAG LRDREM+LKAQISA+ KE AE E+ G P+VTE DI +IV
Sbjct: 444 AAVRGQDFEKAGTLRDREMELKAQISAITGAAKEGEAAEAESSAEGGGPLVTEADIANIV 503
Query: 349 SAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIAS 408
+ WTGIPVEKVS+DES+RL+KMEETLH+RVIGQ+EAV AISRAIRRARVGLKNPNRPIAS
Sbjct: 504 AQWTGIPVEKVSSDESERLIKMEETLHQRVIGQEEAVVAISRAIRRARVGLKNPNRPIAS 563
Query: 409 FIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGG 468
FIFSGPTGVGKSELAK LA+YYFGSEEAM+RLDMSEFMERHTVSKLIGSPPGYVGY EGG
Sbjct: 564 FIFSGPTGVGKSELAKTLASYYFGSEEAMVRLDMSEFMERHTVSKLIGSPPGYVGYNEGG 623
Query: 469 QLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNV 528
QLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTL+IMTSNV
Sbjct: 624 QLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLIIMTSNV 683
Query: 529 GSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKL 588
GSSVIEKGG +GF LD E+DSSYNRIK+LV EELKQYFRPEFLNRLDE+IVFRQL+K
Sbjct: 684 GSSVIEKGGGGLGFQLDTSEEDSSYNRIKTLVNEELKQYFRPEFLNRLDEIIVFRQLSKS 743
Query: 589 EVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSM 648
EVKEIADIML EVF R + K I++ VTERF++R+VEEGYNP+YGARPLRRAIMRLLEDSM
Sbjct: 744 EVKEIADIMLTEVFKRAEIKGIKIDVTERFKDRLVEEGYNPAYGARPLRRAIMRLLEDSM 803
Query: 649 AEKMLAREIKEGDSVIVDVDSDGNVTVLNG 678
AE+ML+ +IKEGDSVI+DVD+DG V+VLNG
Sbjct: 804 AERMLSGDIKEGDSVIIDVDADGQVSVLNG 833
>gi|302841992|ref|XP_002952540.1| hypothetical protein VOLCADRAFT_75431 [Volvox carteri f.
nagariensis]
gi|300262179|gb|EFJ46387.1| hypothetical protein VOLCADRAFT_75431 [Volvox carteri f.
nagariensis]
Length = 915
Score = 1126 bits (2912), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 551/685 (80%), Positives = 622/685 (90%), Gaps = 7/685 (1%)
Query: 1 MVGESTEAVGAGVGGGSS--GNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQIL 58
MVGES E VGAGVGG + NK PTL+EYGTNLT+ A EGKLDPVVGR+ QIERV+QIL
Sbjct: 215 MVGESQEPVGAGVGGSQAQGSNKTPTLQEYGTNLTQQAAEGKLDPVVGRKKQIERVIQIL 274
Query: 59 GRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGE 118
GRRTKNNPCLIGEPGVGKTA+AEGLAQ+IA+GDVP+TIEGK+VITLDMGLLVAGTKYRGE
Sbjct: 275 GRRTKNNPCLIGEPGVGKTAVAEGLAQKIATGDVPETIEGKQVITLDMGLLVAGTKYRGE 334
Query: 119 FEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATT 178
FEERLKKLM+EIKQ+D+IIL IDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATT
Sbjct: 335 FEERLKKLMDEIKQNDDIILMIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATT 394
Query: 179 LDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQ 238
LDEYRKHIEKDPALERRFQPV VPEP+++ET +IL+GLRERYE HHKLRYTDE+L++AA+
Sbjct: 395 LDEYRKHIEKDPALERRFQPVTVPEPTIEETFEILQGLRERYETHHKLRYTDESLMAAAK 454
Query: 239 LSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDF 298
S QYISDRFLPDKAIDLIDEAGSRVRLRH QLPEEAR+L+KELRQ+TK+K+ AVR QDF
Sbjct: 455 YSSQYISDRFLPDKAIDLIDEAGSRVRLRHIQLPEEARDLDKELRQVTKDKDAAVRAQDF 514
Query: 299 EKAGELRDREMDLKAQISALVDKGKEMSKAETEAGD-VGPVVTEVDIQHIVSAWTGIPVE 357
EKAG+LRDREM+LKA+I A++ KE SKAE E+ + GPVVTE DI IV+ WTGIP+E
Sbjct: 515 EKAGQLRDREMELKAKIQAIIAGAKEASKAEAESVEGGGPVVTEQDIASIVAQWTGIPIE 574
Query: 358 KVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGV 417
KVS+DE++RL+KMEE LH RVIGQ+EAV AISRAIRRARVGLKNPNRPIASFIF+GPTGV
Sbjct: 575 KVSSDETERLIKMEEVLHGRVIGQEEAVSAISRAIRRARVGLKNPNRPIASFIFAGPTGV 634
Query: 418 GKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRR 477
GKSELAK LA YYFGSEEAM+RLDMSEFMERHTVSKLIGSPPGYVGY EGGQLTEAVRRR
Sbjct: 635 GKSELAKTLANYYFGSEEAMVRLDMSEFMERHTVSKLIGSPPGYVGYQEGGQLTEAVRRR 694
Query: 478 PYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGG 537
PYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTL+IMTSNVG+SVIEKGG
Sbjct: 695 PYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLIIMTSNVGASVIEKGG 754
Query: 538 RRIGFDLDYD----EKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEI 593
R +GF L D E+D SY+RIKSLV EELK YFRPEFLNRLDE+IVFRQLTK EVK+I
Sbjct: 755 RSMGFFLRPDDEDMEQDMSYSRIKSLVNEELKSYFRPEFLNRLDEIIVFRQLTKKEVKQI 814
Query: 594 ADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKML 653
ADI LK+VF R + K I+++VTE+F++R+V+EG+NP+YGARPLRRAIMRL+ED +AE++L
Sbjct: 815 ADIFLKDVFKRAEEKGIKIEVTEKFKDRLVDEGFNPTYGARPLRRAIMRLIEDCLAERIL 874
Query: 654 AREIKEGDSVIVDVDSDGNVTVLNG 678
+IKEGD VI+DVD DG++ VL G
Sbjct: 875 MGDIKEGDVVIMDVDPDGSIAVLAG 899
>gi|357152345|ref|XP_003576089.1| PREDICTED: chaperone protein ClpC2, chloroplastic-like
[Brachypodium distachyon]
Length = 943
Score = 1107 bits (2864), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 544/671 (81%), Positives = 610/671 (90%), Gaps = 7/671 (1%)
Query: 21 KMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIA 80
KMPTLEEYGTNLTKLAEEGKLDPVVGRQ QIERV+QILGRRTKNNPCLIGEPGVGKTA+A
Sbjct: 262 KMPTLEEYGTNLTKLAEEGKLDPVVGRQKQIERVLQILGRRTKNNPCLIGEPGVGKTAVA 321
Query: 81 EGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFI 140
EGLAQRI +GDVP+T+EGK VITLDMGLLVAGTKYRGEFEERLKKLM+EIKQ+ EIILF+
Sbjct: 322 EGLAQRIVTGDVPETVEGKTVITLDMGLLVAGTKYRGEFEERLKKLMDEIKQNGEIILFL 381
Query: 141 DEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVK 200
DEVHTL+GAGAAEGAIDAANILKP+LARGELQCIGATT+DEYRKHIEKDPALERRFQPVK
Sbjct: 382 DEVHTLVGAGAAEGAIDAANILKPALARGELQCIGATTIDEYRKHIEKDPALERRFQPVK 441
Query: 201 VPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEA 260
VPEP VDE I ILKGL+ERYEIHHKLRYTDEALV+AA LS+QYISDRFLPDKAIDL+DEA
Sbjct: 442 VPEPMVDEAIGILKGLQERYEIHHKLRYTDEALVAAALLSHQYISDRFLPDKAIDLMDEA 501
Query: 261 GSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVD 320
GS VRLRHA+LPEEA+ L+K+L+++ K+K++A+R Q FE AGELR E++LK+QI++LV
Sbjct: 502 GSLVRLRHAKLPEEAKVLDKKLKEVIKQKDDAIRCQQFEMAGELRSEEVELKSQITSLVA 561
Query: 321 KGKEMSKAETEAGDV-GPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVI 379
K KEM+KAE E+G + GPVVTE DIQ IVS WT +PVEKVS DESDRLL+MEETLH+RVI
Sbjct: 562 KNKEMNKAEVESGALAGPVVTEADIQQIVSTWTSVPVEKVSVDESDRLLRMEETLHRRVI 621
Query: 380 GQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIR 439
GQDEAVKAISRAIRRARVGL++P+RPIASFIF+GPTGVGKSELAK+LA Y+GSEEAM+R
Sbjct: 622 GQDEAVKAISRAIRRARVGLRDPSRPIASFIFAGPTGVGKSELAKSLATCYYGSEEAMVR 681
Query: 440 LDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMML 499
LDMSEFMERHTV+KLIGSPPGYVGY+EGGQLTEAVRRRPYTVVL DEIEKAHPDVFN+ML
Sbjct: 682 LDMSEFMERHTVAKLIGSPPGYVGYSEGGQLTEAVRRRPYTVVLLDEIEKAHPDVFNLML 741
Query: 500 QILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKD------SSY 553
QI+EDGRLTDSKGR VDFKNTL+IMTSNVGSSVIEKGGR++GFD +D SSY
Sbjct: 742 QIMEDGRLTDSKGRMVDFKNTLIIMTSNVGSSVIEKGGRQLGFDNGDGVEDGEISSSSSY 801
Query: 554 NRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQ 613
RIKSLV EE+KQYFRPEFLNRLDEMIVFRQL K EVKEIADIML EV R+K K IEL
Sbjct: 802 GRIKSLVDEEMKQYFRPEFLNRLDEMIVFRQLNKFEVKEIADIMLAEVAGRMKEKGIELL 861
Query: 614 VTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNV 673
VTE F+E VV+EG++PSYGARPLRRAIMRLLED++A+K+LA E+KEGDSVI+D DS GNV
Sbjct: 862 VTESFKELVVDEGFDPSYGARPLRRAIMRLLEDTLADKILAEEVKEGDSVILDADSAGNV 921
Query: 674 TVLNGSSGAPE 684
VL+ +PE
Sbjct: 922 AVLSRHGDSPE 932
>gi|149275671|gb|ABR23161.1| ATP-dependent Clp protease regulatory subunit ClpC [Ulva fasciata]
Length = 904
Score = 1092 bits (2824), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 539/680 (79%), Positives = 606/680 (89%), Gaps = 3/680 (0%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
MVGES E VGAGVGG S NK PTLEEYGTNLTK AEEGKLDPVVGR +I+RV+QILGR
Sbjct: 210 MVGESQEPVGAGVGGSQSSNKTPTLEEYGTNLTKQAEEGKLDPVVGRTKEIDRVIQILGR 269
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNPCLI V + AEGLAQ+IASGDVP+TIEGK+ +TLDMGLLVAGTKYRGEFE
Sbjct: 270 RTKNNPCLIVSL-VSVDSSAEGLAQKIASGDVPETIEGKQAVTLDMGLLVAGTKYRGEFE 328
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
E LKKLM+EIKQ+D+IIL IDEVHTLIGAGAAEGAIDAANILKP+LARGELQC+GATTLD
Sbjct: 329 EHLKKLMDEIKQNDDIILMIDEVHTLIGAGAAEGAIDAANILKPALARGELQCMGATTLD 388
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRKHIEKDPALERRF+PV+V EPSVDET QIL GLRERYE HHKLRYTD+AL++AAQ S
Sbjct: 389 EYRKHIEKDPALERRFRPVRVNEPSVDETYQILTGLRERYEAHHKLRYTDDALLAAAQYS 448
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
+QYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARE+EKELR I KEK+ VR Q+FEK
Sbjct: 449 HQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEAREVEKELRGIQKEKDSCVRAQEFEK 508
Query: 301 AGELRDREMDLKAQISALV-DKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 359
AGELRDRE++LKA+I +V DK + AG GP V E DI +IV+ WTGIPVEKV
Sbjct: 509 AGELRDREVELKAKIDTIVSDKKAQDDAEADAAGGAGPTVQETDIANIVAQWTGIPVEKV 568
Query: 360 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 419
S+DE++RL+ ME LH RVIGQ+EAV AISRAIRRARVGLKNPNRPIASFIFSGPTGVGK
Sbjct: 569 SSDETERLVNMESVLHNRVIGQEEAVVAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 628
Query: 420 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 479
SELAK LA YYFGSEEAM+RLDMSE+MERHTV+KLIGSPPGYVGY EGGQLTEAVRRRPY
Sbjct: 629 SELAKTLATYYFGSEEAMVRLDMSEYMERHTVAKLIGSPPGYVGYNEGGQLTEAVRRRPY 688
Query: 480 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 539
TVVLFDE+EKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTL+IMTSNVGS+VIEKGG
Sbjct: 689 TVVLFDEVEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLIIMTSNVGSTVIEKGGGG 748
Query: 540 IGFDLDYD-EKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIML 598
+GF LD D E+++SYNRIK+LV EELKQYFRPEFLNRLDE+IVFRQLTK EVK+IADIML
Sbjct: 749 LGFQLDSDNEEENSYNRIKNLVMEELKQYFRPEFLNRLDEIIVFRQLTKAEVKQIADIML 808
Query: 599 KEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIK 658
K V +R K K+I + +TERF++R+V+EG+NP+YGARPLRRAI RLLED++AE+ML +I+
Sbjct: 809 KGVLERAKEKEITIDLTERFKDRLVDEGFNPAYGARPLRRAIQRLLEDALAERMLGGDIQ 868
Query: 659 EGDSVIVDVDSDGNVTVLNG 678
EGD +I+DVD++GN+TVLNG
Sbjct: 869 EGDKIIMDVDAEGNITVLNG 888
>gi|115485055|ref|NP_001067671.1| Os11g0267400 [Oryza sativa Japonica Group]
gi|75269548|sp|Q53LY0.1|CLPC3_ORYSJ RecName: Full=Chaperone protein ClpC3, chloroplastic; AltName:
Full=ATP-dependent Clp protease ATP-binding subunit ClpC
homolog 3; AltName: Full=Casein lytic proteinase C3;
Flags: Precursor
gi|62734176|gb|AAX96285.1| Clp amino terminal domain, putative [Oryza sativa Japonica Group]
gi|77549794|gb|ABA92591.1| ATP-dependent Clp protease ATP-binding subunit clpA
CD4B,chloroplast precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113644893|dbj|BAF28034.1| Os11g0267400 [Oryza sativa Japonica Group]
Length = 932
Score = 1078 bits (2789), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 535/687 (77%), Positives = 610/687 (88%), Gaps = 2/687 (0%)
Query: 4 ESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTK 63
E + V A VGGGSS K+PTL EYGTNLTKLAEEGKLDPVVGRQ Q++RVVQILGRRTK
Sbjct: 243 EDHQPVSAAVGGGSSTTKIPTLLEYGTNLTKLAEEGKLDPVVGRQNQVDRVVQILGRRTK 302
Query: 64 NNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERL 123
NNPCLIGEPGVGKTAIAEGLAQRIA+G+VP+TI+GK VITLDMGLLVAGTKYRGEFEERL
Sbjct: 303 NNPCLIGEPGVGKTAIAEGLAQRIAAGNVPETIDGKTVITLDMGLLVAGTKYRGEFEERL 362
Query: 124 KKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYR 183
KKLM+E+KQ+ EIILF+DEVHTL+GAGAAEGAIDAANILKP+LARGELQCIGATT+DEYR
Sbjct: 363 KKLMDEVKQNGEIILFLDEVHTLVGAGAAEGAIDAANILKPALARGELQCIGATTIDEYR 422
Query: 184 KHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQY 243
KHIEKDPALERRFQPVKVPEP+VDETI ILKGLRERYEIHHK++YTDE+L++AA+LSYQY
Sbjct: 423 KHIEKDPALERRFQPVKVPEPTVDETIGILKGLRERYEIHHKVQYTDESLIAAARLSYQY 482
Query: 244 ISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGE 303
ISDRFLPDKAIDL+DEAGS VRLR+AQLP+EA+ELEK+L++I EK+EA+R QDFEKAG
Sbjct: 483 ISDRFLPDKAIDLVDEAGSLVRLRNAQLPDEAKELEKKLKKIMAEKSEAIRSQDFEKAGA 542
Query: 304 LRDREMDLKAQISALVDKGKEMSKAETEAGDV-GPVVTEVDIQHIVSAWTGIPVEKVSTD 362
LR E++LK++I +LVDK KEMSKA ++G+ GP VTE D+QHIVS+WTG+PVEKV+ D
Sbjct: 543 LRGEEVELKSEIMSLVDKSKEMSKAAVDSGESPGPTVTEADVQHIVSSWTGVPVEKVTVD 602
Query: 363 ESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSEL 422
ES RLL ME +LH+R++GQDEAV AISRAIRRARVGL++P RPIASFIF+GPTGVGKSEL
Sbjct: 603 ESSRLLAMESSLHRRIVGQDEAVTAISRAIRRARVGLRDPRRPIASFIFAGPTGVGKSEL 662
Query: 423 AKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVV 482
AKALAAYY+GS EAM+RLDMSEFME+HTV+KL+GSPPGYVGY EGGQLTEA+RRRPY VV
Sbjct: 663 AKALAAYYYGSPEAMVRLDMSEFMEKHTVAKLVGSPPGYVGYAEGGQLTEAIRRRPYAVV 722
Query: 483 LFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGF 542
LFDE+EKAHPDVFNMMLQIL+DGRLTDSKGRTVDFKN+L+IMTSNVGS VIEKGGR++
Sbjct: 723 LFDEVEKAHPDVFNMMLQILDDGRLTDSKGRTVDFKNSLIIMTSNVGSGVIEKGGRQL-G 781
Query: 543 DLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVF 602
D Y IK++V EE+K+YFRPEFLNRLDEMIVFRQLTKLEVKEIA IML EV
Sbjct: 782 FAGDGSGDGGYGVIKNMVEEEMKRYFRPEFLNRLDEMIVFRQLTKLEVKEIAGIMLAEVT 841
Query: 603 DRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDS 662
R+ K I LQVTERF+E VVE+G++PSYGARPLRRAIMRLLED++ +KMLA EI GDS
Sbjct: 842 GRIGGKGIGLQVTERFKELVVEQGFDPSYGARPLRRAIMRLLEDTLTDKMLAGEICAGDS 901
Query: 663 VIVDVDSDGNVTVLNGSSGAPESLADP 689
VIVD D DGNV V+ S L P
Sbjct: 902 VIVDADGDGNVVVVGRRSAGLPDLKSP 928
>gi|125534026|gb|EAY80574.1| hypothetical protein OsI_35755 [Oryza sativa Indica Group]
Length = 959
Score = 1065 bits (2755), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 536/714 (75%), Positives = 611/714 (85%), Gaps = 29/714 (4%)
Query: 4 ESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTK 63
E + V A VGGGSS K+PTL EYGTNLTKLAEEGKLDPVVGRQ Q++RVVQILGRRTK
Sbjct: 243 EDHQPVSAAVGGGSSTTKIPTLLEYGTNLTKLAEEGKLDPVVGRQNQVDRVVQILGRRTK 302
Query: 64 NNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGK------------------------ 99
NNPCLIGEPGVGKTAIAEGLAQRIA+G+VP+TI+GK
Sbjct: 303 NNPCLIGEPGVGKTAIAEGLAQRIAAGNVPETIDGKTNLQFEHYEIAKSYLSRLPERKHG 362
Query: 100 ---KVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAI 156
+VITLDMGLLVAGTKYRGEFEERLKKLM+E+KQ+ EIILF+DEVHTL+GAGAAEGAI
Sbjct: 363 NPFQVITLDMGLLVAGTKYRGEFEERLKKLMDEVKQNGEIILFLDEVHTLVGAGAAEGAI 422
Query: 157 DAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGL 216
DAANILKP+LARGELQCIGATT+DEYRKHIEKDPALERRFQPVKVPEP+VDETI ILKGL
Sbjct: 423 DAANILKPALARGELQCIGATTIDEYRKHIEKDPALERRFQPVKVPEPTVDETIGILKGL 482
Query: 217 RERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEAR 276
RERYEIHHK+RYTDE+L++AA+LSYQYISDRFLPDKAIDL+DEAGS VRLR+AQLP+EA+
Sbjct: 483 RERYEIHHKVRYTDESLIAAARLSYQYISDRFLPDKAIDLVDEAGSLVRLRNAQLPDEAK 542
Query: 277 ELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDV- 335
ELEK+L++I EK+EA+R QDFEKAG LR E++LK++I +LVDK KEMSKA ++G+
Sbjct: 543 ELEKKLKKIMAEKSEAIRSQDFEKAGALRGEEVELKSEIMSLVDKSKEMSKAAVDSGESP 602
Query: 336 GPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRA 395
GP VTE D+QHIVS+WTG+PVEKV+ DES RLL ME +LH+R++GQDEAV AISRAIRRA
Sbjct: 603 GPTVTEADVQHIVSSWTGVPVEKVTVDESSRLLAMESSLHRRIVGQDEAVTAISRAIRRA 662
Query: 396 RVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLI 455
RVGL++P RPIASFIF+GPTGVGKSELAKALAAYY+GS EAM+RLDMSEFME+HTV+KL+
Sbjct: 663 RVGLRDPRRPIASFIFAGPTGVGKSELAKALAAYYYGSPEAMVRLDMSEFMEKHTVAKLV 722
Query: 456 GSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTV 515
GSPPGYVGY EGGQLTEA+RRRPY VVLFDE+EKAHPDVFNMMLQIL+DGRLTDSKGRTV
Sbjct: 723 GSPPGYVGYAEGGQLTEAIRRRPYAVVLFDEVEKAHPDVFNMMLQILDDGRLTDSKGRTV 782
Query: 516 DFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNR 575
DFKN+L+IMTSNVGS VIEKGGR++ D Y IK++V EE+K+YFRPEFLNR
Sbjct: 783 DFKNSLIIMTSNVGSGVIEKGGRQL-GFAGDGSGDGGYGVIKNMVEEEMKRYFRPEFLNR 841
Query: 576 LDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARP 635
LDEMIVFRQLTKLEVKEIA IML EV R+ K I LQVTERF+E VVE+G++PSYGARP
Sbjct: 842 LDEMIVFRQLTKLEVKEIAGIMLAEVTGRIGGKGIGLQVTERFKELVVEQGFDPSYGARP 901
Query: 636 LRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNGSSGAPESLADP 689
LRRAIMRLLED++ +KMLA EI GDSVIVD D DGNV V+ S L P
Sbjct: 902 LRRAIMRLLEDTLTDKMLAGEICAGDSVIVDADGDGNVVVVGRRSAGLPDLKSP 955
>gi|62734225|gb|AAX96334.1| Clp amino terminal domain, putative [Oryza sativa Japonica Group]
gi|125576822|gb|EAZ18044.1| hypothetical protein OsJ_33590 [Oryza sativa Japonica Group]
Length = 959
Score = 1064 bits (2751), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 535/714 (74%), Positives = 611/714 (85%), Gaps = 29/714 (4%)
Query: 4 ESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTK 63
E + V A VGGGSS K+PTL EYGTNLTKLAEEGKLDPVVGRQ Q++RVVQILGRRTK
Sbjct: 243 EDHQPVSAAVGGGSSTTKIPTLLEYGTNLTKLAEEGKLDPVVGRQNQVDRVVQILGRRTK 302
Query: 64 NNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGK------------------------ 99
NNPCLIGEPGVGKTAIAEGLAQRIA+G+VP+TI+GK
Sbjct: 303 NNPCLIGEPGVGKTAIAEGLAQRIAAGNVPETIDGKTNLQFEHYEIAKSYLSRLPERKHG 362
Query: 100 ---KVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAI 156
+VITLDMGLLVAGTKYRGEFEERLKKLM+E+KQ+ EIILF+DEVHTL+GAGAAEGAI
Sbjct: 363 NPFQVITLDMGLLVAGTKYRGEFEERLKKLMDEVKQNGEIILFLDEVHTLVGAGAAEGAI 422
Query: 157 DAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGL 216
DAANILKP+LARGELQCIGATT+DEYRKHIEKDPALERRFQPVKVPEP+VDETI ILKGL
Sbjct: 423 DAANILKPALARGELQCIGATTIDEYRKHIEKDPALERRFQPVKVPEPTVDETIGILKGL 482
Query: 217 RERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEAR 276
RERYEIHHK++YTDE+L++AA+LSYQYISDRFLPDKAIDL+DEAGS VRLR+AQLP+EA+
Sbjct: 483 RERYEIHHKVQYTDESLIAAARLSYQYISDRFLPDKAIDLVDEAGSLVRLRNAQLPDEAK 542
Query: 277 ELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDV- 335
ELEK+L++I EK+EA+R QDFEKAG LR E++LK++I +LVDK KEMSKA ++G+
Sbjct: 543 ELEKKLKKIMAEKSEAIRSQDFEKAGALRGEEVELKSEIMSLVDKSKEMSKAAVDSGESP 602
Query: 336 GPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRA 395
GP VTE D+QHIVS+WTG+PVEKV+ DES RLL ME +LH+R++GQDEAV AISRAIRRA
Sbjct: 603 GPTVTEADVQHIVSSWTGVPVEKVTVDESSRLLAMESSLHRRIVGQDEAVTAISRAIRRA 662
Query: 396 RVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLI 455
RVGL++P RPIASFIF+GPTGVGKSELAKALAAYY+GS EAM+RLDMSEFME+HTV+KL+
Sbjct: 663 RVGLRDPRRPIASFIFAGPTGVGKSELAKALAAYYYGSPEAMVRLDMSEFMEKHTVAKLV 722
Query: 456 GSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTV 515
GSPPGYVGY EGGQLTEA+RRRPY VVLFDE+EKAHPDVFNMMLQIL+DGRLTDSKGRTV
Sbjct: 723 GSPPGYVGYAEGGQLTEAIRRRPYAVVLFDEVEKAHPDVFNMMLQILDDGRLTDSKGRTV 782
Query: 516 DFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNR 575
DFKN+L+IMTSNVGS VIEKGGR++ D Y IK++V EE+K+YFRPEFLNR
Sbjct: 783 DFKNSLIIMTSNVGSGVIEKGGRQL-GFAGDGSGDGGYGVIKNMVEEEMKRYFRPEFLNR 841
Query: 576 LDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARP 635
LDEMIVFRQLTKLEVKEIA IML EV R+ K I LQVTERF+E VVE+G++PSYGARP
Sbjct: 842 LDEMIVFRQLTKLEVKEIAGIMLAEVTGRIGGKGIGLQVTERFKELVVEQGFDPSYGARP 901
Query: 636 LRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNGSSGAPESLADP 689
LRRAIMRLLED++ +KMLA EI GDSVIVD D DGNV V+ S L P
Sbjct: 902 LRRAIMRLLEDTLTDKMLAGEICAGDSVIVDADGDGNVVVVGRRSAGLPDLKSP 955
>gi|303288740|ref|XP_003063658.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226454726|gb|EEH52031.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 839
Score = 1057 bits (2733), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 504/661 (76%), Positives = 591/661 (89%), Gaps = 2/661 (0%)
Query: 20 NKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAI 79
+K PTLEE+G++LTK AEE KLDP +GR ++ RV QILGRRTKNNPCLIGEPGVGK++I
Sbjct: 162 SKTPTLEEFGSDLTKQAEEAKLDPCIGRVTEMTRVTQILGRRTKNNPCLIGEPGVGKSSI 221
Query: 80 AEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILF 139
AEGLAQ+IA+ DVP+T+EGK+++TLDMGLLVAGTKYRGEFEERLKKLM+E+K D+IILF
Sbjct: 222 AEGLAQKIAANDVPETLEGKRMMTLDMGLLVAGTKYRGEFEERLKKLMDEVKADDDIILF 281
Query: 140 IDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPV 199
IDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATT+DEYRKHIEKDPALERRFQPV
Sbjct: 282 IDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTIDEYRKHIEKDPALERRFQPV 341
Query: 200 KVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDE 259
+VPEP+VDE IQIL+GL+ERYE+HHKL+YTDEA+V+AA+ ++QYISDRFLPDKAIDLIDE
Sbjct: 342 QVPEPTVDEAIQILQGLQERYELHHKLKYTDEAIVAAAKFAHQYISDRFLPDKAIDLIDE 401
Query: 260 AGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALV 319
AGSRVRL +A LPEEA+EL+KEL+ + KEK+ A+RGQDFE AG LRD+E++LK +I +
Sbjct: 402 AGSRVRLENAALPEEAKELDKELKALLKEKDTAIRGQDFEAAGALRDKEVELKTEIQKIT 461
Query: 320 DKGKEMSKAETEAG--DVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKR 377
+E +KA EAG D GP V E DI IV+AWTGIPV+KVS+DE +L+ MEETLH R
Sbjct: 462 QAKQEENKAAVEAGGGDSGPTVKESDISKIVAAWTGIPVDKVSSDEGSQLMNMEETLHSR 521
Query: 378 VIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAM 437
+IGQ+EAV A SRAIRRAR GLKNPNRP+ASFIFSGPTGVGKSELAK+++ +YFGSE+AM
Sbjct: 522 LIGQEEAVVACSRAIRRARTGLKNPNRPVASFIFSGPTGVGKSELAKSISQFYFGSEDAM 581
Query: 438 IRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNM 497
+RLDMSEFMERHTVSKLIGSPPGYVGY+EGGQLTEAVRRRPYT+VLFDEIEKAHPDVFNM
Sbjct: 582 VRLDMSEFMERHTVSKLIGSPPGYVGYSEGGQLTEAVRRRPYTLVLFDEIEKAHPDVFNM 641
Query: 498 MLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIK 557
MLQILEDGRLTDSKGR VDFKNTL+IMTSNVGSSVIEKGG +GF L+ D +D+SY RIK
Sbjct: 642 MLQILEDGRLTDSKGRVVDFKNTLIIMTSNVGSSVIEKGGGGLGFQLNDDAEDTSYQRIK 701
Query: 558 SLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTER 617
+LV EELK YFRPEFLNRLDE+IVFRQL K EV+EIA IML++VF RLK KDI L VT+R
Sbjct: 702 TLVNEELKNYFRPEFLNRLDEIIVFRQLNKNEVREIAAIMLEQVFKRLKEKDITLDVTDR 761
Query: 618 FRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTVLN 677
F++R+V+EG+NP+YGARPLRRA+MRLLED++AEKML +I EG S I+DV++ G +TVL
Sbjct: 762 FKDRLVDEGFNPTYGARPLRRAVMRLLEDNLAEKMLNGDIGEGSSCIMDVNAAGEITVLT 821
Query: 678 G 678
G
Sbjct: 822 G 822
>gi|412985529|emb|CCO18975.1| predicted protein [Bathycoccus prasinos]
Length = 944
Score = 1056 bits (2732), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 500/660 (75%), Positives = 591/660 (89%), Gaps = 1/660 (0%)
Query: 20 NKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAI 79
+K PTLEE+G++LTK AEE KLDP VGR +I RV QILGRRTKNNPCL+GEPGVGK+AI
Sbjct: 268 SKTPTLEEFGSDLTKQAEEAKLDPCVGRTNEIRRVTQILGRRTKNNPCLVGEPGVGKSAI 327
Query: 80 AEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILF 139
AEGLAQ+IASG VP+T+EGK+++TLDMGLLVAGTKYRGEFEERLKKLM+E+KQ D IILF
Sbjct: 328 AEGLAQQIASGTVPETLEGKRMMTLDMGLLVAGTKYRGEFEERLKKLMDEVKQDDAIILF 387
Query: 140 IDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPV 199
IDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATT+DEYRKHIEKDPALERRFQPV
Sbjct: 388 IDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTIDEYRKHIEKDPALERRFQPV 447
Query: 200 KVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDE 259
+VPEP+VDETI+ILKGLRERYE+HHKL+YTDEAL AA+ S QYISDRFLPDKAIDLIDE
Sbjct: 448 QVPEPTVDETIEILKGLRERYEVHHKLKYTDEALECAAKFSSQYISDRFLPDKAIDLIDE 507
Query: 260 AGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALV 319
AGSRVRL H +PEEA+EL+KEL+ + KEK+ A+RGQDFE AG +RD+E++LK+QI A+
Sbjct: 508 AGSRVRLEHTSIPEEAKELDKELKALQKEKDTAIRGQDFEAAGSIRDKEVELKSQIKAIT 567
Query: 320 DKGKEMSKAETEAG-DVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRV 378
+K +E +KAE E+G + GP VTE DI +V+AWTGIPV+KV++DE+ RL+ MEE LH+R+
Sbjct: 568 EKKQEEAKAEIESGKETGPTVTEQDIADVVAAWTGIPVDKVASDEAQRLMGMEEKLHERL 627
Query: 379 IGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMI 438
IGQ+EA+ A SRAIRRAR GLK+PNRP+ASFIF+GPTGVGKSELAK+L+ +YFGSEEAM+
Sbjct: 628 IGQEEAIVACSRAIRRARTGLKSPNRPVASFIFAGPTGVGKSELAKSLSQFYFGSEEAMV 687
Query: 439 RLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMM 498
RLDMSEFMERHTVSKLIGSPPGYVGY+EGGQLTEAVRRRPYT+VLFDEIEKAHPDVFNMM
Sbjct: 688 RLDMSEFMERHTVSKLIGSPPGYVGYSEGGQLTEAVRRRPYTLVLFDEIEKAHPDVFNMM 747
Query: 499 LQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKS 558
LQILEDGRLTDSKGR +DFKNTL+IMTSNVG+ IEKGG +GF LD + +D SY RIKS
Sbjct: 748 LQILEDGRLTDSKGRVIDFKNTLIIMTSNVGAQQIEKGGGGLGFQLDDNVEDQSYQRIKS 807
Query: 559 LVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERF 618
LV +ELK YFRPEFLNRLDE+I+FRQL K EV+EIA IML VF RLK K+I L VT+RF
Sbjct: 808 LVQDELKNYFRPEFLNRLDEIIIFRQLNKQEVREIAMIMLNNVFKRLKEKEITLDVTDRF 867
Query: 619 RERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNG 678
+++VV+EG++P++GARPLRRAIMRLLED++AEKML+ +I EG S I+DV+++G + V+ G
Sbjct: 868 KDKVVDEGFSPAFGARPLRRAIMRLLEDNLAEKMLSGDIAEGTSAIMDVNAEGEIIVMTG 927
>gi|220910059|ref|YP_002485370.1| ATPase AAA [Cyanothece sp. PCC 7425]
gi|219866670|gb|ACL47009.1| ATPase AAA-2 domain protein [Cyanothece sp. PCC 7425]
Length = 825
Score = 1054 bits (2725), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 520/681 (76%), Positives = 603/681 (88%), Gaps = 6/681 (0%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
M+GE+ E V AG G + K PTL+E+G+NLT++A +GKLDPVVGRQ +IERV+QILGR
Sbjct: 141 MLGETAE-VSAGSSQGRT--KTPTLDEFGSNLTQMAADGKLDPVVGRQKEIERVIQILGR 197
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNP LIGEPGVGKTAIAEGLAQRIA+GD+PD ++ K+V+TLD+GLLVAGTKYRGEFE
Sbjct: 198 RTKNNPVLIGEPGVGKTAIAEGLAQRIANGDIPDILQEKRVVTLDIGLLVAGTKYRGEFE 257
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
ERLKK+M+EI+ + +IL IDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTLD
Sbjct: 258 ERLKKIMDEIRSAGNVILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLD 317
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRKHIE+D ALERRFQPV V EPSV+ETI+IL GLRERYE HHKL+ DEAL +AA+LS
Sbjct: 318 EYRKHIERDAALERRFQPVMVGEPSVEETIEILYGLRERYEKHHKLKILDEALEAAAKLS 377
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
+YISDR+LPDKAIDLIDEAGSRVRL ++QLP A+EL+KELRQ+ KEK++AVR QDF+K
Sbjct: 378 DRYISDRYLPDKAIDLIDEAGSRVRLINSQLPPAAKELDKELRQVLKEKDDAVRAQDFDK 437
Query: 301 AGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVS 360
AGELRDREM++KA+I AL + K + +E EA PVV+E DI HIV++WTG+PV K++
Sbjct: 438 AGELRDREMEIKAEIRALSQQKKAETTSEDEAQS--PVVSEEDIAHIVASWTGVPVNKLT 495
Query: 361 TDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 420
ES++LL ME+TLH+R+IGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK+
Sbjct: 496 ESESEKLLHMEDTLHQRIIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKT 555
Query: 421 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 480
ELAKALAAY+FGSEEAMIRLDMSE+MERHTVSKLIGSPPGYVGY EGGQLTEAVRRRPYT
Sbjct: 556 ELAKALAAYFFGSEEAMIRLDMSEYMERHTVSKLIGSPPGYVGYNEGGQLTEAVRRRPYT 615
Query: 481 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI 540
VVLFDEIEKAHPDVFNM+LQILEDGRLTD+KGRTVDFKNTLLIMTSN+GS VIEKGG +
Sbjct: 616 VVLFDEIEKAHPDVFNMLLQILEDGRLTDAKGRTVDFKNTLLIMTSNIGSKVIEKGGGGL 675
Query: 541 GFDLD-YDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 599
GF+ E DS YNRI+SLV EELKQYFRPEFLNRLDE+IVFRQLT+ EVKEIADI+LK
Sbjct: 676 GFEFSGAGEADSQYNRIRSLVNEELKQYFRPEFLNRLDEIIVFRQLTRDEVKEIADILLK 735
Query: 600 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 659
EVF RL + I L+VT RF++R+V+EGYNPSYGARPLRRAIMRLLEDS+AE++L+ +KE
Sbjct: 736 EVFSRLTEQGITLEVTARFKDRLVDEGYNPSYGARPLRRAIMRLLEDSLAEEILSGRVKE 795
Query: 660 GDSVIVDVDSDGNVTVLNGSS 680
GD+ IVDVD DG + VL G +
Sbjct: 796 GDTAIVDVDGDGQIKVLQGET 816
>gi|255087254|ref|XP_002505550.1| predicted protein [Micromonas sp. RCC299]
gi|226520820|gb|ACO66808.1| predicted protein [Micromonas sp. RCC299]
Length = 886
Score = 1052 bits (2721), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 502/661 (75%), Positives = 588/661 (88%), Gaps = 2/661 (0%)
Query: 20 NKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAI 79
+K PTLEE+G++LTK AEE KLDP +GR +I RV QILGRRTKNNPCLIGEPGVGK+AI
Sbjct: 209 SKTPTLEEFGSDLTKQAEEAKLDPCIGRSNEIIRVTQILGRRTKNNPCLIGEPGVGKSAI 268
Query: 80 AEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILF 139
AEGLAQ+IA+ DVP+T+EGK+++TLDMGLLVAGTKYRGEFEERLKKLM+E+K ++IILF
Sbjct: 269 AEGLAQKIAANDVPETLEGKRMMTLDMGLLVAGTKYRGEFEERLKKLMDEVKADEDIILF 328
Query: 140 IDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPV 199
IDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATT+DEYRKHIEKDPALERRFQPV
Sbjct: 329 IDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTIDEYRKHIEKDPALERRFQPV 388
Query: 200 KVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDE 259
+VPEPSV+E I IL+GLRERYE HHKLRYTDEA+ +AA+ ++QYISDRFLPDKAIDLIDE
Sbjct: 389 QVPEPSVEEAILILQGLRERYETHHKLRYTDEAIEAAAKFAHQYISDRFLPDKAIDLIDE 448
Query: 260 AGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALV 319
AGSRVRL HA LPEEA+EL+KEL+ + KEK+ A+R QDFE AG LRD+E++LK +I +
Sbjct: 449 AGSRVRLAHAALPEEAKELDKELKALLKEKDTAIRAQDFEAAGALRDKEVELKTEIQKIT 508
Query: 320 DKGKEMSKAETEAG--DVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKR 377
+E +KA EAG + GP VTE DI IV++WTGIPVEKVS+DE ++L+ MEETLH R
Sbjct: 509 KAKQEENKAALEAGGGEAGPTVTESDIAKIVASWTGIPVEKVSSDEGNQLMNMEETLHSR 568
Query: 378 VIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAM 437
+IGQ+EAV A SRAIRRAR GLKNPNRP+ASFIFSGPTGVGKSELAK+++++YFGSE+AM
Sbjct: 569 LIGQEEAVVACSRAIRRARTGLKNPNRPVASFIFSGPTGVGKSELAKSISSFYFGSEDAM 628
Query: 438 IRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNM 497
+RLDMSEFMERHTVSKLIGSPPGYVGY+EGGQLTEAVRRRPYT+VLFDE+EKAHPDVFNM
Sbjct: 629 VRLDMSEFMERHTVSKLIGSPPGYVGYSEGGQLTEAVRRRPYTLVLFDEVEKAHPDVFNM 688
Query: 498 MLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIK 557
MLQILEDGRLTDSKGR VDFKNTL+I+TSNVGSSVIEKGG +GF L+ D +D+SY RIK
Sbjct: 689 MLQILEDGRLTDSKGRVVDFKNTLIILTSNVGSSVIEKGGGGLGFQLNDDAEDTSYQRIK 748
Query: 558 SLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTER 617
LV EELK YFRPEFLNRLDE+IVFRQL K EV+EIA IML +VF RLK K+I L VT+R
Sbjct: 749 QLVNEELKNYFRPEFLNRLDEIIVFRQLNKNEVREIAQIMLNQVFKRLKEKEITLDVTDR 808
Query: 618 FRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTVLN 677
F++R+V+EG+NP+YGARPLRRA+MRLLED++AEKML +I EG S I+DV++ G +TVL
Sbjct: 809 FKDRLVDEGFNPTYGARPLRRAVMRLLEDNLAEKMLNGDISEGSSCIMDVNAAGEITVLT 868
Query: 678 G 678
G
Sbjct: 869 G 869
>gi|218194777|gb|EEC77204.1| hypothetical protein OsI_15716 [Oryza sativa Indica Group]
Length = 785
Score = 1048 bits (2709), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 519/559 (92%), Positives = 551/559 (98%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
MVGESTEAVGAGVGGGSSG KMPTLEEYGTNLTKLAEEGKLDPVVGRQ QIERV QILGR
Sbjct: 227 MVGESTEAVGAGVGGGSSGQKMPTLEEYGTNLTKLAEEGKLDPVVGRQDQIERVTQILGR 286
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNPCLIGEPGVGKTAIAEGLAQRI++GDVP+TIEGKKVITLDMGLLVAGTKYRGEFE
Sbjct: 287 RTKNNPCLIGEPGVGKTAIAEGLAQRISNGDVPETIEGKKVITLDMGLLVAGTKYRGEFE 346
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
ERLKKLMEEIKQ+D+IILFIDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTLD
Sbjct: 347 ERLKKLMEEIKQNDDIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLD 406
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRKHIEKDPALERRFQPVKVPEP+VDETIQIL+GLRERYE+HHKLRYTD++L++AAQLS
Sbjct: 407 EYRKHIEKDPALERRFQPVKVPEPTVDETIQILRGLRERYELHHKLRYTDDSLIAAAQLS 466
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLP+EA+EL+KELRQ+TK+KNEAVRGQDFEK
Sbjct: 467 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPDEAKELDKELRQVTKDKNEAVRGQDFEK 526
Query: 301 AGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVS 360
AGELRDREM+LKAQI+A++DK KEM KAETE+G+VGP+VTE DIQHIVS+WTGIPVEKVS
Sbjct: 527 AGELRDREMELKAQITAIIDKSKEMVKAETESGEVGPLVTEADIQHIVSSWTGIPVEKVS 586
Query: 361 TDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 420
+DESDRLLKMEETLH R+IGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS
Sbjct: 587 SDESDRLLKMEETLHTRIIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 646
Query: 421 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 480
ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT
Sbjct: 647 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 706
Query: 481 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI 540
VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR+I
Sbjct: 707 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRKI 766
Query: 541 GFDLDYDEKDSSYNRIKSL 559
GFDLDYDEKD+SYNRI++
Sbjct: 767 GFDLDYDEKDTSYNRIRAW 785
>gi|443316093|ref|ZP_21045553.1| ATPase with chaperone activity, ATP-binding subunit [Leptolyngbya
sp. PCC 6406]
gi|442784324|gb|ELR94204.1| ATPase with chaperone activity, ATP-binding subunit [Leptolyngbya
sp. PCC 6406]
Length = 823
Score = 1047 bits (2707), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 512/678 (75%), Positives = 599/678 (88%), Gaps = 7/678 (1%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
M+GE+ E GGG K PTL+E+G+NLT++A EGKLDPVVGRQ +IERV+QILGR
Sbjct: 141 MLGETAEV---SAGGGQGRTKTPTLDEFGSNLTQMAGEGKLDPVVGRQNEIERVIQILGR 197
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNP LIGEPGVGKTAIAEGLAQRI++GD+PD +E K+V+TLD+GLLVAGTKYRGEFE
Sbjct: 198 RTKNNPVLIGEPGVGKTAIAEGLAQRISTGDIPDILEEKRVVTLDIGLLVAGTKYRGEFE 257
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
ERLKK+M+EI+ + +IL IDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTLD
Sbjct: 258 ERLKKIMDEIRSAGNVILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLD 317
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRKHIE+D ALERRFQPV V EPSV+ETI+IL GLR+RYE HHKLR DEAL +AA+LS
Sbjct: 318 EYRKHIERDAALERRFQPVMVGEPSVEETIEILHGLRDRYEQHHKLRIEDEALNAAAKLS 377
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
+YISDRFLPDKAIDLIDEAGSRVRL ++QLP A+EL+KELRQ+ KEK+ AVR QDF++
Sbjct: 378 DRYISDRFLPDKAIDLIDEAGSRVRLINSQLPPAAKELDKELRQLLKEKDNAVRSQDFDR 437
Query: 301 AGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVS 360
AGELRDREM++KA+I + +GK KAE+E GD PVVTE DI HIV++WTG+PV K++
Sbjct: 438 AGELRDREMEIKAEIRTIA-QGK---KAESEDGDDSPVVTEEDIAHIVASWTGVPVNKLT 493
Query: 361 TDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 420
ES++LL ME+TLH+R+IGQDEAVKAISRAIRRARVGLK+PNRPIASFIFSGPTGVGK+
Sbjct: 494 ESESEKLLHMEDTLHQRLIGQDEAVKAISRAIRRARVGLKSPNRPIASFIFSGPTGVGKT 553
Query: 421 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 480
ELAK+LAAY+FGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGY EGGQLTEAVRRRPYT
Sbjct: 554 ELAKSLAAYFFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYNEGGQLTEAVRRRPYT 613
Query: 481 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI 540
V+LFDEIEKAHPDVFNM+LQILEDGRLTD+KGRTVDFKN+LLIMTSN+GS VIEKGG +
Sbjct: 614 VILFDEIEKAHPDVFNMLLQILEDGRLTDAKGRTVDFKNSLLIMTSNIGSKVIEKGGGGL 673
Query: 541 GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 600
GFD + ++ +S YNRI+SLV EELKQYFRPEFLNRLDE+IVFRQLTK EVK I+DI+L+E
Sbjct: 674 GFDFEDNQAESQYNRIRSLVNEELKQYFRPEFLNRLDEIIVFRQLTKDEVKSISDILLRE 733
Query: 601 VFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEG 660
+F RL + I L+VTERF++R+VEEGYNPSYGARPLRRAIMRLLED++AE++L+ +K+G
Sbjct: 734 IFGRLTEQGITLEVTERFKDRLVEEGYNPSYGARPLRRAIMRLLEDTLAEEILSGRLKDG 793
Query: 661 DSVIVDVDSDGNVTVLNG 678
+ VDVD G V + G
Sbjct: 794 STATVDVDDQGKVMIQAG 811
>gi|354567441|ref|ZP_08986610.1| ATPase AAA-2 domain protein [Fischerella sp. JSC-11]
gi|353542713|gb|EHC12174.1| ATPase AAA-2 domain protein [Fischerella sp. JSC-11]
Length = 851
Score = 1047 bits (2707), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 510/675 (75%), Positives = 597/675 (88%), Gaps = 7/675 (1%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
M+GE+ E GG S GNK PTL+E+G+NLT++A +GKLDPVVGR +IERV+QILGR
Sbjct: 170 MLGETAEVTQ---GGPSRGNKTPTLDEFGSNLTQMALDGKLDPVVGRAKEIERVIQILGR 226
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNP LIGEPGVGKTAIAEGLAQRIA+ DVPD +E K+V+TLD+GLLVAGTKYRGEFE
Sbjct: 227 RTKNNPVLIGEPGVGKTAIAEGLAQRIANKDVPDILEDKRVVTLDIGLLVAGTKYRGEFE 286
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
ERLKK+M+EI+Q+ +IL IDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTLD
Sbjct: 287 ERLKKIMDEIRQAGNVILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLD 346
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRKHIE+D ALERRFQPV V EPSVDETI+IL+GLR+RYE HHKL+ +DEAL++AA+LS
Sbjct: 347 EYRKHIERDAALERRFQPVMVGEPSVDETIEILRGLRDRYEQHHKLKISDEALIAAAKLS 406
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
+YISDR+LPDKAIDLIDEAGSRVRL ++QLP A+EL++ELRQI KEK++AVR QDF++
Sbjct: 407 DRYISDRYLPDKAIDLIDEAGSRVRLINSQLPPAAKELDRELRQILKEKDDAVRAQDFDR 466
Query: 301 AGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVS 360
AGELRDREM++KA+I A+ +AE E PVVTE DI HIV++WTG+PV K++
Sbjct: 467 AGELRDREMEIKAEIRAIAQSKTGTGRAEGEE----PVVTEEDIAHIVASWTGVPVNKLT 522
Query: 361 TDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 420
ES++LL ME+TLH+R+IGQ++AVKA+SRAIRRARVGLKNPNRPIASF+FSGPTGVGK+
Sbjct: 523 ESESEKLLHMEDTLHQRLIGQEDAVKAVSRAIRRARVGLKNPNRPIASFVFSGPTGVGKT 582
Query: 421 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 480
ELAKALA+Y+FGSEEAMIRLDMSE+MERHTVSKLIGSPPGYVGY EGGQLTEAVRRRPYT
Sbjct: 583 ELAKALASYFFGSEEAMIRLDMSEYMERHTVSKLIGSPPGYVGYNEGGQLTEAVRRRPYT 642
Query: 481 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI 540
VVLFDEIEKAHPDVFNM+LQILEDGRLTD+KGRTVDFKNTLLI+TSN+GS VIEKGG I
Sbjct: 643 VVLFDEIEKAHPDVFNMLLQILEDGRLTDAKGRTVDFKNTLLILTSNIGSKVIEKGGGGI 702
Query: 541 GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 600
GF+ D+ +S YNRIK LV EELK YFRPEFLNRLDE+IVFRQL K EV +IADIML+E
Sbjct: 703 GFEFAEDQSESQYNRIKFLVNEELKNYFRPEFLNRLDEIIVFRQLNKEEVMQIADIMLRE 762
Query: 601 VFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEG 660
VF RL K I L+V++RF+ER+++EGYNPSYGARPLRRAIMRLLEDS+AE++L+ IKEG
Sbjct: 763 VFGRLTEKGINLEVSDRFKERLLQEGYNPSYGARPLRRAIMRLLEDSLAEEILSGRIKEG 822
Query: 661 DSVIVDVDSDGNVTV 675
D+ IVDVD GN+ V
Sbjct: 823 DTAIVDVDESGNIAV 837
>gi|158335106|ref|YP_001516278.1| ATP-dependent protease, ATP-binding subunit ClpC [Acaryochloris
marina MBIC11017]
gi|158305347|gb|ABW26964.1| ATP-dependent protease, ATP-binding subunit ClpC [Acaryochloris
marina MBIC11017]
Length = 822
Score = 1045 bits (2701), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 510/675 (75%), Positives = 591/675 (87%), Gaps = 7/675 (1%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
M+GE+ E GGG K PTL+E+G NLT LA EGKLDPVVGRQ +IERV+QILGR
Sbjct: 141 MLGETAEV---SAGGGQGRTKTPTLDEFGANLTNLASEGKLDPVVGRQKEIERVIQILGR 197
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNP LIGEPGVGKTAIAEGLAQRIA+GD+PD +E K+V+TLD+GLLVAGTKYRGEFE
Sbjct: 198 RTKNNPVLIGEPGVGKTAIAEGLAQRIANGDIPDILEEKRVVTLDIGLLVAGTKYRGEFE 257
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
ERLKK+M+EI+Q+ +IL IDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTLD
Sbjct: 258 ERLKKIMDEIRQASNVILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLD 317
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRKHIE+D ALERRFQPV V EPSV+ETI+IL GLRERYE HHKL DE+L +AA+LS
Sbjct: 318 EYRKHIERDAALERRFQPVMVGEPSVEETIEILYGLRERYEQHHKLSILDESLEAAAKLS 377
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
+YISDR+LPDKAIDLIDEAGSRVRL ++QLP A+EL+KELR++ K+K++AVR QDF+K
Sbjct: 378 DRYISDRYLPDKAIDLIDEAGSRVRLINSQLPPAAKELDKELRKVLKDKDDAVRSQDFDK 437
Query: 301 AGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVS 360
AGELRDREM++K++I A+ + K+ E D P VTE DI HIV++WTG+PV K++
Sbjct: 438 AGELRDREMEIKSEIKAIA----QNKKSSEENKDDSPKVTEEDIAHIVASWTGVPVSKLT 493
Query: 361 TDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 420
ES++LL ME+TLH+R+IGQDEAV+AISRAIRRARVGLKNPNRPIASFIFSGPTGVGK+
Sbjct: 494 ESESEKLLHMEDTLHQRLIGQDEAVRAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKT 553
Query: 421 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 480
EL KALA Y+FGSEEAMIRLDMSE+MERHTVSKLIGSPPGYVGY EGGQLTEAVRRRPYT
Sbjct: 554 ELTKALATYFFGSEEAMIRLDMSEYMERHTVSKLIGSPPGYVGYNEGGQLTEAVRRRPYT 613
Query: 481 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI 540
VVLFDEIEKAHPDVFNM+LQILEDGRLTD+KGRTVDFKNTLLIMTSN+GS VIEKGG +
Sbjct: 614 VVLFDEIEKAHPDVFNMLLQILEDGRLTDAKGRTVDFKNTLLIMTSNIGSKVIEKGGGGL 673
Query: 541 GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 600
GF+ DE DS YNRI+SLV EELK YFRPEFLNRLDE+IVFRQLTK EVKEI++++LKE
Sbjct: 674 GFEFAEDEADSQYNRIRSLVNEELKGYFRPEFLNRLDEIIVFRQLTKDEVKEISELLLKE 733
Query: 601 VFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEG 660
VF RL+ K I L +T+RF+ER+VEEGYNPSYGARPLRRAIMRLLED++AE++L+ +KEG
Sbjct: 734 VFSRLEEKSITLNITDRFKERLVEEGYNPSYGARPLRRAIMRLLEDTLAEEILSGRVKEG 793
Query: 661 DSVIVDVDSDGNVTV 675
D+ IVDVD D V +
Sbjct: 794 DTAIVDVDEDQQVKI 808
>gi|145356586|ref|XP_001422509.1| chaperone, Hsp100 family, ClpC-type [Ostreococcus lucimarinus
CCE9901]
gi|144582752|gb|ABP00826.1| chaperone, Hsp100 family, ClpC-type [Ostreococcus lucimarinus
CCE9901]
Length = 840
Score = 1043 bits (2696), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 520/682 (76%), Positives = 606/682 (88%), Gaps = 4/682 (0%)
Query: 1 MVGESTEAVGAGVGGGSSGN---KMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQI 57
MVGE+ EAVGAG GGG K PTLEE+G++LTK AEEGKLDP +GR +I RV QI
Sbjct: 141 MVGETQEAVGAGAGGGQGAQSGSKTPTLEEFGSDLTKKAEEGKLDPCIGRANEIVRVTQI 200
Query: 58 LGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRG 117
LGRRTKNNPCLIGEPGVGK+AIAEGLAQ+IA+ DVPDT++ K+++TLDMGLLVAGTKYRG
Sbjct: 201 LGRRTKNNPCLIGEPGVGKSAIAEGLAQKIAANDVPDTLDSKRMMTLDMGLLVAGTKYRG 260
Query: 118 EFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGAT 177
EFEERLKKLM+E+K + IILFIDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGAT
Sbjct: 261 EFEERLKKLMDEVKSDENIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGAT 320
Query: 178 TLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAA 237
T+DEYRKHIEKDPALERRFQPV+VPEPSVDETIQIL+GLRERYE+HHKL+Y D+AL++AA
Sbjct: 321 TIDEYRKHIEKDPALERRFQPVQVPEPSVDETIQILRGLRERYELHHKLKYDDDALIAAA 380
Query: 238 QLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQD 297
+ S QYISDRFLPDKAIDLIDEAGSRVRL +A LPEEA+EL+KEL+ + KEK+ A+R QD
Sbjct: 381 KFSSQYISDRFLPDKAIDLIDEAGSRVRLENAALPEEAKELDKELKALMKEKDTAIRSQD 440
Query: 298 FEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDV-GPVVTEVDIQHIVSAWTGIPV 356
FE AG LRDRE++L+AQI + ++ +E +KA+ E+GD GP V E DI IV+AWTGIPV
Sbjct: 441 FEAAGGLRDREVELRAQIKQITERKQEENKAKAESGDASGPTVVEQDIADIVAAWTGIPV 500
Query: 357 EKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTG 416
+KVS+DE RL+ MEETLHKR++GQ+EAV A +RAIRRAR GLKNPNRP+ASFIFSGPTG
Sbjct: 501 DKVSSDEGTRLMDMEETLHKRLVGQEEAVVACARAIRRARTGLKNPNRPVASFIFSGPTG 560
Query: 417 VGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRR 476
VGKSELAK+L+A+YFGSEEAM+RLDMSEFMERHTVSKLIGSPPGYVGY+EGGQLTEAVRR
Sbjct: 561 VGKSELAKSLSAFYFGSEEAMVRLDMSEFMERHTVSKLIGSPPGYVGYSEGGQLTEAVRR 620
Query: 477 RPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKG 536
RPYT+VLFDEIEKAHPDVFNMMLQILEDGRLTDSKGR +DFKNTL+IMTSNVG+S IEKG
Sbjct: 621 RPYTLVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRVIDFKNTLIIMTSNVGASAIEKG 680
Query: 537 GRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADI 596
G +GF LD + +D SYNRIKSLV E+LK YFRPEFLNRLDE+IVFRQL K EV+EIA I
Sbjct: 681 GGGLGFQLDDNAEDQSYNRIKSLVMEDLKNYFRPEFLNRLDEIIVFRQLNKQEVREIAYI 740
Query: 597 MLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLARE 656
ML+ VF RLK K+I L+ TERF++R+V+EG++P+YGARPLRRAIMRLLED+++EKML E
Sbjct: 741 MLENVFKRLKEKEIVLECTERFKDRLVDEGFSPAYGARPLRRAIMRLLEDNLSEKMLTGE 800
Query: 657 IKEGDSVIVDVDSDGNVTVLNG 678
I EG S I+DV+++G +TVL G
Sbjct: 801 ISEGSSCIMDVNAEGEITVLTG 822
>gi|359457125|ref|ZP_09245688.1| ATP-dependent protease, ATP-binding subunit ClpC [Acaryochloris sp.
CCMEE 5410]
Length = 822
Score = 1043 bits (2696), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 510/675 (75%), Positives = 590/675 (87%), Gaps = 7/675 (1%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
M+GE+ E GGG K PTL+E+G NLT LA EGKLDPVVGRQ +IERV+QILGR
Sbjct: 141 MLGETAEV---SAGGGQGRTKTPTLDEFGANLTNLASEGKLDPVVGRQKEIERVIQILGR 197
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNP LIGEPGVGKTAIAEGLAQRIA+GD+PD +E K+V+TLD+GLLVAGTKYRGEFE
Sbjct: 198 RTKNNPVLIGEPGVGKTAIAEGLAQRIANGDIPDILEEKRVVTLDIGLLVAGTKYRGEFE 257
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
ERLKK+M+EI+Q+ +IL IDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTLD
Sbjct: 258 ERLKKIMDEIRQASNVILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLD 317
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRKHIE+D ALERRFQPV V EPSVDETI+IL GLRERYE HHKL DE+L +AA+LS
Sbjct: 318 EYRKHIERDAALERRFQPVMVGEPSVDETIEILYGLRERYEQHHKLSILDESLEAAAKLS 377
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
+YISDR+LPDKAIDLIDEAGSRVRL ++QLP A+EL+KELR++ K+K++AVR QDF+K
Sbjct: 378 DRYISDRYLPDKAIDLIDEAGSRVRLINSQLPPAAKELDKELRKVLKDKDDAVRSQDFDK 437
Query: 301 AGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVS 360
AGELRDREM++K++I A+ + K+ + D P VTE DI HIV++WTG+PV K++
Sbjct: 438 AGELRDREMEIKSEIKAIA----QNKKSSEDNKDDSPKVTEEDIAHIVASWTGVPVSKLT 493
Query: 361 TDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 420
ES++LL ME+TLH+R+IGQDEAV+AISRAIRRARVGLKNPNRPIASFIFSGPTGVGK+
Sbjct: 494 ESESEKLLHMEDTLHQRLIGQDEAVRAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKT 553
Query: 421 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 480
EL KALA Y+FGSEEAMIRLDMSE+MERHTVSKLIGSPPGYVGY EGGQLTEAVRRRPYT
Sbjct: 554 ELTKALATYFFGSEEAMIRLDMSEYMERHTVSKLIGSPPGYVGYNEGGQLTEAVRRRPYT 613
Query: 481 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI 540
VVLFDEIEKAHPDVFNM+LQILEDGRLTD+KGRTVDFKNTLLIMTSN+GS VIEKGG +
Sbjct: 614 VVLFDEIEKAHPDVFNMLLQILEDGRLTDAKGRTVDFKNTLLIMTSNIGSKVIEKGGGGL 673
Query: 541 GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 600
GF+ DE DS YNRI+SLV EELK YFRPEFLNRLDE+IVFRQL K EVKEI++++LKE
Sbjct: 674 GFEFAEDEADSQYNRIRSLVNEELKGYFRPEFLNRLDEIIVFRQLNKDEVKEISELLLKE 733
Query: 601 VFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEG 660
VF RL+ K I L +TERF+ER+VEEGYNPSYGARPLRRAIMRLLED++AE++L+ +KEG
Sbjct: 734 VFVRLEEKSITLNITERFKERLVEEGYNPSYGARPLRRAIMRLLEDTLAEEILSGRVKEG 793
Query: 661 DSVIVDVDSDGNVTV 675
D+ IVDVD D V +
Sbjct: 794 DTAIVDVDEDQQVKI 808
>gi|427714632|ref|YP_007063256.1| chaperone ATPase [Synechococcus sp. PCC 6312]
gi|427378761|gb|AFY62713.1| ATPase with chaperone activity, ATP-binding subunit [Synechococcus
sp. PCC 6312]
Length = 824
Score = 1042 bits (2695), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 516/678 (76%), Positives = 595/678 (87%), Gaps = 9/678 (1%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
M+GE+ E V AG G + K PTL+E+G+NLT++A +GKLDPVVGRQ +IERV+QILGR
Sbjct: 141 MLGETAE-VAAGSSSGRT--KTPTLDEFGSNLTQMAIDGKLDPVVGRQKEIERVIQILGR 197
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNP LIGEPGVGKTAIAEGLAQRIA+ D+PD ++ K+V+TLD+GLLVAGTKYRGEFE
Sbjct: 198 RTKNNPVLIGEPGVGKTAIAEGLAQRIANNDIPDILQEKRVVTLDIGLLVAGTKYRGEFE 257
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
ERLKK+M+EI+Q+ +IL IDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTLD
Sbjct: 258 ERLKKIMDEIRQASNVILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLD 317
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRKHIE+D ALERRFQPV V EPSVDETI+IL GLRERYE HHKL+ DE+L +AA+L+
Sbjct: 318 EYRKHIERDAALERRFQPVMVGEPSVDETIEILYGLRERYEKHHKLKILDESLEAAAKLA 377
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
+YISDR+LPDKAIDLIDEAGSRVRL ++QLP A+EL+KELRQ+ K+K++AVR QDF+K
Sbjct: 378 DRYISDRYLPDKAIDLIDEAGSRVRLINSQLPPAAKELDKELRQVLKDKDDAVRAQDFDK 437
Query: 301 AGELRDREMDLKAQISALVDKGKEMSKAETEAG-DVGPVVTEVDIQHIVSAWTGIPVEKV 359
AGELRD+EMDLKAQI + + K+ET D PVVTE DI HIVS+WTG+P+ K+
Sbjct: 438 AGELRDKEMDLKAQIRNI----SQQKKSETTTDEDKSPVVTEEDIAHIVSSWTGVPLSKL 493
Query: 360 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 419
+ ES++LL ME+TLH+RVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK
Sbjct: 494 TETESEKLLHMEDTLHQRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 553
Query: 420 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 479
+EL KALAAY+FGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGY EGGQLTEAVRRRPY
Sbjct: 554 TELTKALAAYFFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYNEGGQLTEAVRRRPY 613
Query: 480 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 539
TVVLFDEIEKAHPDVFN++LQILEDGRLTDSKGRTVDFKNTLLIMTSN+GS VIEKG
Sbjct: 614 TVVLFDEIEKAHPDVFNLLLQILEDGRLTDSKGRTVDFKNTLLIMTSNIGSKVIEKGAGG 673
Query: 540 IGFDLDYDE-KDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIML 598
+GF+ D +S YNRI+SLV EELKQYFRPEFLNRLDE+IVFRQLTK EVKEIADI+L
Sbjct: 674 LGFEFASDNPAESQYNRIRSLVNEELKQYFRPEFLNRLDEIIVFRQLTKDEVKEIADILL 733
Query: 599 KEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIK 658
KEVF RL ++I L VT+RF+ER+++EGYNPSYGARPLRRAIMRLLEDS+AE++L +K
Sbjct: 734 KEVFTRLTERNITLTVTDRFKERLIDEGYNPSYGARPLRRAIMRLLEDSLAEELLTGRMK 793
Query: 659 EGDSVIVDVDSDGNVTVL 676
EG + +VDVD G V VL
Sbjct: 794 EGATAVVDVDESGQVKVL 811
>gi|113476064|ref|YP_722125.1| ATPase [Trichodesmium erythraeum IMS101]
gi|110167112|gb|ABG51652.1| ATPase AAA-2 [Trichodesmium erythraeum IMS101]
Length = 825
Score = 1042 bits (2694), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 513/678 (75%), Positives = 596/678 (87%), Gaps = 7/678 (1%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
M+GE+ E V AG GGG + K PTL+E+G+NLT++A EGKLDPVVGRQ +IERV+QILGR
Sbjct: 141 MLGETAE-VTAGGGGGRT--KTPTLDEFGSNLTQMASEGKLDPVVGRQTEIERVIQILGR 197
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNP LIGEPGVGKTAIAEGLAQRIA+ D+PD +E K+V+TLD+GLLVAGTKYRGEFE
Sbjct: 198 RTKNNPVLIGEPGVGKTAIAEGLAQRIANNDIPDILEEKRVVTLDIGLLVAGTKYRGEFE 257
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
ERLKK+M+EI+ + +IL IDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTLD
Sbjct: 258 ERLKKIMDEIRSAGNVILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLD 317
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRKHIE+D ALERRFQPV V EPSVDETI+IL GLRERYE HHKL+ D AL +AA+LS
Sbjct: 318 EYRKHIERDAALERRFQPVMVGEPSVDETIEILYGLRERYEQHHKLKILDTALEAAAKLS 377
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
+YISDR+LPDKAIDLIDEAGSRVRL ++QLP A+EL+KELR I KEK+EAVR QDF+K
Sbjct: 378 DRYISDRYLPDKAIDLIDEAGSRVRLINSQLPPAAKELDKELRSILKEKDEAVRSQDFDK 437
Query: 301 AGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVS 360
AGELRDREM++K++I +L K S E D P+VTE DI HIV++WTG+PV K++
Sbjct: 438 AGELRDREMEIKSEIRSLAQNKKLDSTNE----DDSPMVTEEDIAHIVASWTGVPVNKLT 493
Query: 361 TDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 420
ES++LL ME+TLH+R+IGQ+EAVKA+SRAIRRARVGLKNPNRPIASF+FSGPTGVGK+
Sbjct: 494 ESESEKLLHMEDTLHQRLIGQEEAVKAVSRAIRRARVGLKNPNRPIASFVFSGPTGVGKT 553
Query: 421 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 480
EL KALAAY+FGSEEAMIRLDMSE+MERHTVSKLIGSPPGYVGY EGGQLTEAVRRRPYT
Sbjct: 554 ELTKALAAYFFGSEEAMIRLDMSEYMERHTVSKLIGSPPGYVGYNEGGQLTEAVRRRPYT 613
Query: 481 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI 540
VVLFDEIEKAHPDVFNM+LQILEDGRLTD+KGRTVDFKNTL+IMTSN+GS VIEKGG +
Sbjct: 614 VVLFDEIEKAHPDVFNMLLQILEDGRLTDAKGRTVDFKNTLIIMTSNIGSKVIEKGGGGL 673
Query: 541 GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 600
GF+ +E D+ YNRI++LV EELKQYFRPEFLNRLDE+IVFRQLTK EVKEI+ I+LKE
Sbjct: 674 GFEFSENEADAQYNRIRNLVNEELKQYFRPEFLNRLDEIIVFRQLTKDEVKEISVILLKE 733
Query: 601 VFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEG 660
VF RL K I+L++T+RF+ER+VEEGYNPSYGARPLRRAIMRLLEDS+AE++LA +I EG
Sbjct: 734 VFSRLTEKGIKLEITDRFQERLVEEGYNPSYGARPLRRAIMRLLEDSLAEEILAGKINEG 793
Query: 661 DSVIVDVDSDGNVTVLNG 678
D+ +VDV G + V G
Sbjct: 794 DTAVVDVGESGQIIVSKG 811
>gi|334118189|ref|ZP_08492279.1| ATPase AAA-2 domain protein [Microcoleus vaginatus FGP-2]
gi|428317617|ref|YP_007115499.1| ATPase AAA-2 domain protein [Oscillatoria nigro-viridis PCC 7112]
gi|333460174|gb|EGK88784.1| ATPase AAA-2 domain protein [Microcoleus vaginatus FGP-2]
gi|428241297|gb|AFZ07083.1| ATPase AAA-2 domain protein [Oscillatoria nigro-viridis PCC 7112]
Length = 825
Score = 1041 bits (2692), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 511/678 (75%), Positives = 594/678 (87%), Gaps = 4/678 (0%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
M+GE+ E A GGG+ K PTL+E+G NLT++A +GKLDPVVGRQ +IERV+QILGR
Sbjct: 141 MLGETAEV--AATGGGAR-TKTPTLDEFGANLTQMAVDGKLDPVVGRQKEIERVIQILGR 197
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNP LIGEPGVGKTAIAEGLAQRIA+ D+PD +E K+V+TLD+GLLVAGTKYRGEFE
Sbjct: 198 RTKNNPVLIGEPGVGKTAIAEGLAQRIANNDIPDILEEKRVVTLDIGLLVAGTKYRGEFE 257
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
ERLKK+M+EI+ + +IL IDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTLD
Sbjct: 258 ERLKKIMDEIRTAGNVILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLD 317
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRKHIE+D ALERRFQPV V EP+VDETI+IL GLRERYE HHKL+ D AL +AA+LS
Sbjct: 318 EYRKHIERDAALERRFQPVMVGEPTVDETIEILFGLRERYEQHHKLKILDTALEAAAKLS 377
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
++YISDRFLPDKAIDL+DEAGSRVRL ++QLP A+EL+KELRQ+ K+K+EAVR QDF+K
Sbjct: 378 HRYISDRFLPDKAIDLVDEAGSRVRLINSQLPPAAKELDKELRQVLKDKDEAVRSQDFDK 437
Query: 301 AGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVS 360
AGELRDREM +KA+I A + + K+ A T D PVVTE DI IV++WTG+PV K++
Sbjct: 438 AGELRDREMTIKAEIRA-ISQAKKTDSARTGETDPSPVVTEEDIAQIVASWTGVPVNKLT 496
Query: 361 TDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 420
ES++LL ME+TLH+R+IGQ+EAVKA+SRAIRRARVGLKNPNRPIASFIFSGPTGVGK+
Sbjct: 497 ESESEKLLHMEDTLHQRLIGQEEAVKAVSRAIRRARVGLKNPNRPIASFIFSGPTGVGKT 556
Query: 421 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 480
EL KALA Y+FGSE+AMIRLDMSE+MERHTVSKLIGSPPGYVGY EGGQLTEAVRRRPYT
Sbjct: 557 ELTKALAGYFFGSEDAMIRLDMSEYMERHTVSKLIGSPPGYVGYNEGGQLTEAVRRRPYT 616
Query: 481 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI 540
VVLFDEIEKAHPDVFNM+LQILEDGRLTD+KGRTVDFKNTLLIMTSN+GS VIEKGG +
Sbjct: 617 VVLFDEIEKAHPDVFNMLLQILEDGRLTDAKGRTVDFKNTLLIMTSNIGSKVIEKGGGGL 676
Query: 541 GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 600
GF+ ++ D++YNRI+SLV EELK YFRPEFLNRLDE+IVFRQL K EVKEIA IMLKE
Sbjct: 677 GFEFSDNQADANYNRIRSLVNEELKNYFRPEFLNRLDEIIVFRQLNKEEVKEIAVIMLKE 736
Query: 601 VFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEG 660
VF RL + I L+VTE+F+ER+VEEGYNPSYGARPLRRAIMRLLEDS+AE++L+ IK+G
Sbjct: 737 VFGRLTEQGITLEVTEKFKERLVEEGYNPSYGARPLRRAIMRLLEDSLAEEILSGRIKDG 796
Query: 661 DSVIVDVDSDGNVTVLNG 678
D+ +VDV DG V VL G
Sbjct: 797 DTAVVDVGEDGIVKVLQG 814
>gi|119487029|ref|ZP_01620901.1| ATP-dependent Clp protease regulatory subunit [Lyngbya sp. PCC
8106]
gi|119455958|gb|EAW37092.1| ATP-dependent Clp protease regulatory subunit [Lyngbya sp. PCC
8106]
Length = 825
Score = 1040 bits (2690), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 512/679 (75%), Positives = 593/679 (87%), Gaps = 8/679 (1%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
M+GE+ E V AG G S K PTL+E+G+NLT++A EGKLDPVVGRQ +IERV+QILGR
Sbjct: 141 MLGETAE-VTAGASG--SRTKTPTLDEFGSNLTQMAAEGKLDPVVGRQKEIERVIQILGR 197
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNP LIGEPGVGKTAIAEGLAQRIA D+PD +E K+V+TLD+GLLVAGTKYRGEFE
Sbjct: 198 RTKNNPVLIGEPGVGKTAIAEGLAQRIAQNDIPDILEEKRVVTLDIGLLVAGTKYRGEFE 257
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
ERLKK+M+EI+ + +IL IDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTLD
Sbjct: 258 ERLKKIMDEIRSAGNVILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLD 317
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRKHIE+D ALERRFQPV V EPSV ET++IL GLRERYE HHKL+ DEAL +AA+LS
Sbjct: 318 EYRKHIERDAALERRFQPVMVGEPSVSETVEILYGLRERYEQHHKLKIMDEALEAAAKLS 377
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
+YISDR+LPDKAIDLIDEAGSRVRL ++QLP A+EL+KELRQ+ KEK+++VR QDF++
Sbjct: 378 DRYISDRYLPDKAIDLIDEAGSRVRLINSQLPPAAKELDKELRQVLKEKDDSVRSQDFDR 437
Query: 301 AGELRDREMDLKAQISALVDKGKEMSKAETEAG-DVGPVVTEVDIQHIVSAWTGIPVEKV 359
AGELRDREM +K+QI + + K+ET D P+VTE DI HIV++WTGIPV K+
Sbjct: 438 AGELRDREMKIKSQIREIA----QTKKSETNTTEDDSPMVTEEDIAHIVASWTGIPVNKL 493
Query: 360 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 419
+ ES++LL ME+TLH+R+IGQ+EAVKA+SRAIRRARVGLKNPNRPIASFIFSGPTGVGK
Sbjct: 494 TESESEKLLHMEDTLHQRLIGQEEAVKAVSRAIRRARVGLKNPNRPIASFIFSGPTGVGK 553
Query: 420 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 479
+EL KALA Y+FGSEEAM+RLDMSEFMERHTVSKLIGSPPGYVGY EGGQLTEAVRRRPY
Sbjct: 554 TELTKALATYFFGSEEAMVRLDMSEFMERHTVSKLIGSPPGYVGYNEGGQLTEAVRRRPY 613
Query: 480 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 539
TVVLFDEIEKAHPDVFNM+LQILEDGRLTD+KGRTVDFKNTL+IMTSN+GS VIEKGG
Sbjct: 614 TVVLFDEIEKAHPDVFNMLLQILEDGRLTDAKGRTVDFKNTLIIMTSNIGSKVIEKGGGG 673
Query: 540 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 599
+GF+ +E D+ Y+RI++LV EELKQYFRPEFLNRLDE+IVFRQLTK EVKEIA IML
Sbjct: 674 LGFEFSENESDAQYHRIRNLVNEELKQYFRPEFLNRLDEIIVFRQLTKDEVKEIAVIMLN 733
Query: 600 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 659
EVF RL K I+L++T+RF ER+VEEGYNPSYGARPLRRAIMRLLEDS+AE++L+ I E
Sbjct: 734 EVFSRLTEKGIKLEITDRFNERLVEEGYNPSYGARPLRRAIMRLLEDSLAEEILSGRITE 793
Query: 660 GDSVIVDVDSDGNVTVLNG 678
GD+ +VDVD DG VTV G
Sbjct: 794 GDTAVVDVDGDGQVTVAQG 812
>gi|254414473|ref|ZP_05028239.1| ATPase, AAA family [Coleofasciculus chthonoplastes PCC 7420]
gi|196178703|gb|EDX73701.1| ATPase, AAA family [Coleofasciculus chthonoplastes PCC 7420]
Length = 824
Score = 1039 bits (2687), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 513/682 (75%), Positives = 598/682 (87%), Gaps = 10/682 (1%)
Query: 1 MVGESTEAVGAGVGGGSSG-NKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 59
M+GE+ E G SSG K PTL+E+G+NLT++A EGKLDPVVGR +IERV+QILG
Sbjct: 141 MLGETAEVTS----GASSGRTKTPTLDEFGSNLTQMAGEGKLDPVVGRAKEIERVIQILG 196
Query: 60 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 119
RRTKNNP LIGEPGVGKTAIAEGLAQRIA+ D+PD +E K+V+TLD+GLLVAGTKYRGEF
Sbjct: 197 RRTKNNPVLIGEPGVGKTAIAEGLAQRIANNDIPDILEEKRVVTLDIGLLVAGTKYRGEF 256
Query: 120 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 179
EERLKK+M+EI+Q+ +IL IDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTL
Sbjct: 257 EERLKKIMDEIRQAANVILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTL 316
Query: 180 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 239
DEYRKHIE+D ALERRFQPV V EPSV+ETI+IL GLRERYE HHKL+ DEAL +AA+L
Sbjct: 317 DEYRKHIERDAALERRFQPVMVGEPSVEETIEILYGLRERYEQHHKLKILDEALDAAAKL 376
Query: 240 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 299
S +YISDR+LPDKAIDLIDEAGSRVRL ++QLP A+EL+KELRQ+ KEK++AVR QDF+
Sbjct: 377 SDRYISDRYLPDKAIDLIDEAGSRVRLINSQLPPAAKELDKELRQVLKEKDDAVRSQDFD 436
Query: 300 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 359
+AGELRDREM++K +I A+ KAET D PVV E DI HIV++WTG+PV K+
Sbjct: 437 RAGELRDREMEIKGEIRAIAQN----KKAETGTDD-SPVVDEEDIAHIVASWTGVPVSKL 491
Query: 360 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 419
+ ES++LL ME+TLH+R+IGQ++AVKA+SRAIRRARVGLKNPNRPIASF+FSGPTGVGK
Sbjct: 492 TESESEKLLHMEDTLHQRLIGQEDAVKAVSRAIRRARVGLKNPNRPIASFVFSGPTGVGK 551
Query: 420 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 479
+ELAK+LAAY+FGSEEAMIRLDMSE+MERHTVSKLIGSPPGYVGY EGGQLTEAVRRRPY
Sbjct: 552 TELAKSLAAYFFGSEEAMIRLDMSEYMERHTVSKLIGSPPGYVGYNEGGQLTEAVRRRPY 611
Query: 480 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 539
TVVLFDEIEKAHPDVFNM+LQILEDGRLTD+KGRTVDFKNTLLIMTSN+GS VIEKGG
Sbjct: 612 TVVLFDEIEKAHPDVFNMLLQILEDGRLTDAKGRTVDFKNTLLIMTSNIGSKVIEKGGGG 671
Query: 540 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 599
+GF+L +E +S YNRI+SLV EELKQYFRPEFLNRLDE+IVFRQLTK E+KEI DI+L+
Sbjct: 672 LGFELSDNEAESQYNRIRSLVNEELKQYFRPEFLNRLDEIIVFRQLTKDEIKEICDILLR 731
Query: 600 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 659
EVF RL K I L+VT+RF+ER+VEEGY+PSYGARPLRRAIMRLLED +AE++L+ ++E
Sbjct: 732 EVFKRLTEKGITLEVTDRFKERLVEEGYSPSYGARPLRRAIMRLLEDVLAEEILSTRLQE 791
Query: 660 GDSVIVDVDSDGNVTVLNGSSG 681
GDS IVDVD +G V V+ G G
Sbjct: 792 GDSAIVDVDEEGKVKVIPGEPG 813
>gi|428774264|ref|YP_007166052.1| ATPase [Cyanobacterium stanieri PCC 7202]
gi|428688543|gb|AFZ48403.1| ATPase AAA-2 domain protein [Cyanobacterium stanieri PCC 7202]
Length = 824
Score = 1038 bits (2684), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 508/675 (75%), Positives = 598/675 (88%), Gaps = 6/675 (0%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
M+GE TE+ G GGGS NK PTL+E+G+NLT LA EGKLDPVVGRQ +IERV+QILGR
Sbjct: 141 MLGE-TESAPVGAGGGSRSNKTPTLDEFGSNLTNLATEGKLDPVVGRQKEIERVIQILGR 199
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNP LIGEPGVGKTAIAEGLAQRI + DVPD +E K+V+TLD+GLLVAGTKYRGEFE
Sbjct: 200 RTKNNPVLIGEPGVGKTAIAEGLAQRIGNKDVPDLLEDKRVVTLDIGLLVAGTKYRGEFE 259
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
ERLKK+MEEI+Q+ +IL IDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTLD
Sbjct: 260 ERLKKIMEEIRQAGNVILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLD 319
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRKHIE+D AL RRFQPV V EPSVDETI+IL GLRERYE HHKL+ +DEAL +AA+LS
Sbjct: 320 EYRKHIERDAALARRFQPVMVGEPSVDETIEILFGLRERYEQHHKLKISDEALDAAAKLS 379
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
+YISDR+LPDKAIDLIDEAGSRVRL ++QLP EA+EL+KELRQ+ KEK+EAVR QDF+K
Sbjct: 380 DRYISDRYLPDKAIDLIDEAGSRVRLLNSQLPAEAKELDKELRQVLKEKDEAVRSQDFDK 439
Query: 301 AGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVS 360
AGELRDREM++K +I L D+ K+ PVV E +I IV++WTG+PV+K++
Sbjct: 440 AGELRDREMEIKTEIRGLADQKKQNPDVSD-----NPVVNEEEIAQIVASWTGVPVQKLT 494
Query: 361 TDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 420
ES++LL ME+TLH+R+IGQ++AVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK+
Sbjct: 495 ESESEKLLHMEDTLHQRIIGQEDAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKT 554
Query: 421 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 480
EL KALA Y+FGSE++MIRLDMSE+MERHTVSKLIGSPPGYVGY+EGGQLTEAVRRRPYT
Sbjct: 555 ELTKALATYFFGSEDSMIRLDMSEYMERHTVSKLIGSPPGYVGYSEGGQLTEAVRRRPYT 614
Query: 481 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI 540
VVLFDEIEKAHPDVFN++LQILEDGRLTD+KGRTVDFKNTLLIMTSN+GS VIEKGG +
Sbjct: 615 VVLFDEIEKAHPDVFNLLLQILEDGRLTDAKGRTVDFKNTLLIMTSNIGSKVIEKGGGGL 674
Query: 541 GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 600
GF+L+ D+ +S YNRI+SLV EELK YFRPEFLNRLDE+IVFRQL K EVKEI++++LKE
Sbjct: 675 GFELEDDQTESQYNRIRSLVNEELKNYFRPEFLNRLDEIIVFRQLNKEEVKEISELLLKE 734
Query: 601 VFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEG 660
VF RL ++I LQVT++F+ER+VEEGYNP+YGARPLRRAIMRLLED +AE++L++ +KEG
Sbjct: 735 VFARLTEQEITLQVTDKFKERLVEEGYNPAYGARPLRRAIMRLLEDVLAEEILSKRLKEG 794
Query: 661 DSVIVDVDSDGNVTV 675
D+ +VDV+ +G VT+
Sbjct: 795 DTALVDVNEEGKVTI 809
>gi|308811204|ref|XP_003082910.1| Chaperone HSP104 and related ATP-dependent Clp proteases (ISS)
[Ostreococcus tauri]
gi|116054788|emb|CAL56865.1| Chaperone HSP104 and related ATP-dependent Clp proteases (ISS),
partial [Ostreococcus tauri]
Length = 781
Score = 1038 bits (2683), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 504/660 (76%), Positives = 595/660 (90%), Gaps = 1/660 (0%)
Query: 20 NKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAI 79
+K PTLEE+G++LTK AEEGKLDP +GR +I RV QILGRRTKNNPCLIGEPGVGK+AI
Sbjct: 104 SKTPTLEEFGSDLTKKAEEGKLDPCIGRVNEIIRVTQILGRRTKNNPCLIGEPGVGKSAI 163
Query: 80 AEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILF 139
AEGLAQ+IA+ DVPDT++ K+++TLDMGLLVAGTKYRGEFEERLKKLM+E+K + IILF
Sbjct: 164 AEGLAQKIATNDVPDTLDSKRMMTLDMGLLVAGTKYRGEFEERLKKLMDEVKNDENIILF 223
Query: 140 IDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPV 199
IDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATT+DEYRKHIEKDPALERRFQPV
Sbjct: 224 IDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTIDEYRKHIEKDPALERRFQPV 283
Query: 200 KVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDE 259
+VPEP+VDETIQIL+GLRERYE+HHKL+Y+D+AL++AA+ S QYISDRFLPDKAIDLIDE
Sbjct: 284 QVPEPTVDETIQILRGLRERYELHHKLKYSDDALIAAAKFSSQYISDRFLPDKAIDLIDE 343
Query: 260 AGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALV 319
AGSRVRL +A LPEEA+EL+KEL+ + KEK+ A+R QDFE AG LRDRE++L+AQI +
Sbjct: 344 AGSRVRLANAALPEEAKELDKELKALMKEKDNAIRSQDFEAAGGLRDREVELRAQIKQIT 403
Query: 320 DKGKEMSKAETEAGD-VGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRV 378
++ +E S+A++E+GD GP V E DI +V+AWTGIPV+KVS+DE RL+ MEETLHKR+
Sbjct: 404 ERKQEESRAKSESGDETGPQVVEQDIADVVAAWTGIPVDKVSSDEGTRLMAMEETLHKRL 463
Query: 379 IGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMI 438
+GQ+EAV A +RAIRRAR GLKNPNRP+ASFIFSGPTGVGKSELAK+L+++YFGSE+AM+
Sbjct: 464 VGQEEAVVACARAIRRARTGLKNPNRPVASFIFSGPTGVGKSELAKSLSSFYFGSEDAMV 523
Query: 439 RLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMM 498
RLDMSEFMERHTVSKLIGSPPGYVGY+EGGQLTEAVRRRPYT+VLFDEIEKAHPDVFNMM
Sbjct: 524 RLDMSEFMERHTVSKLIGSPPGYVGYSEGGQLTEAVRRRPYTLVLFDEIEKAHPDVFNMM 583
Query: 499 LQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKS 558
LQILEDGRLTDSKGR VDFKNTL+IMTSNVG+S IEKGG +GF LD + +D SYNRIKS
Sbjct: 584 LQILEDGRLTDSKGRVVDFKNTLIIMTSNVGASAIEKGGGGLGFQLDDNAEDQSYNRIKS 643
Query: 559 LVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERF 618
LV E+LK YFRPEFLNRLDE+IVFRQL K EV+EIA IML+ VF RLK K+I L+ TERF
Sbjct: 644 LVMEDLKNYFRPEFLNRLDEIIVFRQLNKQEVREIAYIMLENVFKRLKEKEITLECTERF 703
Query: 619 RERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNG 678
++R+V+EG++P+YGARPLRRAIMRLLED+++EKML EI EG S I+DV+++G +TVL G
Sbjct: 704 KDRLVDEGFSPAYGARPLRRAIMRLLEDNLSEKMLTGEISEGSSCIMDVNAEGEITVLTG 763
>gi|298492878|ref|YP_003723055.1| ATPase AAA-2 domain-containing protein ['Nostoc azollae' 0708]
gi|298234796|gb|ADI65932.1| ATPase AAA-2 domain protein ['Nostoc azollae' 0708]
Length = 824
Score = 1038 bits (2683), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 509/677 (75%), Positives = 596/677 (88%), Gaps = 10/677 (1%)
Query: 1 MVGESTEAVGAGVGGGSSG-NKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 59
M+GE+ E GGGSSG K PTL+E+G+NLT++A + KLDPVVGR +IERV+QILG
Sbjct: 141 MLGETAEV---SPGGGSSGRTKTPTLDEFGSNLTQMATDNKLDPVVGRAKEIERVIQILG 197
Query: 60 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 119
RRTKNNP LIGEPGVGKTAIAEGLA RIA+ DVPD +E K+V+TLD+GLLVAGTKYRGEF
Sbjct: 198 RRTKNNPVLIGEPGVGKTAIAEGLASRIANKDVPDILEDKRVVTLDIGLLVAGTKYRGEF 257
Query: 120 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 179
EERLKK+M+EI+ + +IL IDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTL
Sbjct: 258 EERLKKIMDEIRSAGNVILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTL 317
Query: 180 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 239
DEYRKHIE+D ALERRFQPV V EPSVDETI+IL GLR+RYE HHKL+ +DEALV+AA+L
Sbjct: 318 DEYRKHIERDAALERRFQPVMVGEPSVDETIEILYGLRDRYEQHHKLKISDEALVAAAKL 377
Query: 240 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 299
S +YISDR+LPDKAIDL+DEAGSRVRL ++QLP A+EL+KELRQI KEK++AVR QDF+
Sbjct: 378 SDRYISDRYLPDKAIDLVDEAGSRVRLINSQLPPAAKELDKELRQILKEKDDAVRSQDFD 437
Query: 300 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGD-VGPVVTEVDIQHIVSAWTGIPVEK 358
+AGELRDREM++KA+I + +K GD V PVVTE DI HIV++WTG+PV K
Sbjct: 438 RAGELRDREMEIKAEIRTIAQ-----TKTNAAGGDGVEPVVTEEDIAHIVASWTGVPVNK 492
Query: 359 VSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVG 418
++ ES++LL ME+TLH+R+IGQD+AVKA+SRAIRRARVGLKNPNRPIASF+FSGPTGVG
Sbjct: 493 LTESESEKLLHMEDTLHQRLIGQDDAVKAVSRAIRRARVGLKNPNRPIASFVFSGPTGVG 552
Query: 419 KSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRP 478
K+ELAK+LA+Y+FGSEEAMIRLDMSE+MERHTVSKLIGSPPGYVGY EGGQLTEAVRRRP
Sbjct: 553 KTELAKSLASYFFGSEEAMIRLDMSEYMERHTVSKLIGSPPGYVGYNEGGQLTEAVRRRP 612
Query: 479 YTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR 538
YTVVLFDEIEKAHPDVFNM+LQILEDGRLTD+KGRTVDFKNTLLI+TSN+GS VIEKGG
Sbjct: 613 YTVVLFDEIEKAHPDVFNMLLQILEDGRLTDAKGRTVDFKNTLLILTSNIGSKVIEKGGS 672
Query: 539 RIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIML 598
IGF+ D +S YNRI+SLV EELKQYFRPEFLNRLDE+IVFRQL KLEV +IA+IML
Sbjct: 673 GIGFEFAEDATESQYNRIRSLVNEELKQYFRPEFLNRLDEIIVFRQLNKLEVTQIAEIML 732
Query: 599 KEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIK 658
KEVF RL K I L+V++RF+ER+V+EGY+PSYGARPLRRAIMRLLEDS+AE++L+ IK
Sbjct: 733 KEVFGRLTEKGITLEVSDRFKERLVQEGYSPSYGARPLRRAIMRLLEDSLAEEILSGRIK 792
Query: 659 EGDSVIVDVDSDGNVTV 675
+GD+ +VDVD +G V V
Sbjct: 793 DGDTALVDVDENGIVQV 809
>gi|17230491|ref|NP_487039.1| endopeptidase Clp ATP-binding chain [Nostoc sp. PCC 7120]
gi|17132093|dbj|BAB74698.1| endopeptidase Clp ATP-binding chain [Nostoc sp. PCC 7120]
Length = 839
Score = 1037 bits (2682), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 503/675 (74%), Positives = 594/675 (88%), Gaps = 7/675 (1%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
M+GE+ E G G + K PTL+E+G+NLT++A + KLDPVVGR +IERV+QILGR
Sbjct: 157 MLGETAEVSATGQSGRT---KTPTLDEFGSNLTQMATDNKLDPVVGRAKEIERVIQILGR 213
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNP LIGEPGVGKTAIAEGLA RIA+ DVPD +E K+V+TLD+GLLVAGTKYRGEFE
Sbjct: 214 RTKNNPVLIGEPGVGKTAIAEGLASRIANKDVPDILEDKRVVTLDIGLLVAGTKYRGEFE 273
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
ERLKK+M+EI+Q+ +IL IDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTLD
Sbjct: 274 ERLKKIMDEIRQAGNVILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLD 333
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRKHIE+D ALERRFQPV V EPSVDETI+IL GLR+RYE HHKL+ +DEALV+AA+LS
Sbjct: 334 EYRKHIERDAALERRFQPVMVGEPSVDETIEILYGLRDRYEQHHKLKISDEALVAAAKLS 393
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
+YISDR+LPDKAIDL+DEAGSRVRL ++QLP A+EL+KELRQI KEK++AVR QDF++
Sbjct: 394 DRYISDRYLPDKAIDLVDEAGSRVRLMNSQLPPAAKELDKELRQILKEKDDAVRSQDFDR 453
Query: 301 AGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVS 360
AGELRDREM++KA+I A+ S E + PVVTE DI HIV++WTG+PV K++
Sbjct: 454 AGELRDREMEIKAEIRAIAQSKTNASGTEGQE----PVVTEEDIAHIVASWTGVPVNKLT 509
Query: 361 TDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 420
ES++LL ME+TLH+R+IGQ++AVKA+SRAIRRARVGLKNPNRPIASF+FSGPTGVGK+
Sbjct: 510 ESESEKLLHMEDTLHQRLIGQEDAVKAVSRAIRRARVGLKNPNRPIASFVFSGPTGVGKT 569
Query: 421 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 480
ELAK+LA+Y+FGSEEAMIRLDMSE+MERHTVSKLIGSPPGYVGY EGGQLTEAVRRRPYT
Sbjct: 570 ELAKSLASYFFGSEEAMIRLDMSEYMERHTVSKLIGSPPGYVGYNEGGQLTEAVRRRPYT 629
Query: 481 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI 540
VVLFDEIEKAHPDVFNM+LQILEDGRLTD+KGRTVDFKNTLLI+TSN+GS VIEKGG I
Sbjct: 630 VVLFDEIEKAHPDVFNMLLQILEDGRLTDAKGRTVDFKNTLLILTSNIGSKVIEKGGGGI 689
Query: 541 GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 600
GF+ D+ ++ YNRI+SLV EELKQYFRPEFLNRLDE+IVFRQL+KLEV EIADIMLKE
Sbjct: 690 GFEFSEDQTETQYNRIRSLVNEELKQYFRPEFLNRLDEIIVFRQLSKLEVTEIADIMLKE 749
Query: 601 VFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEG 660
VF RL K I L+V++RF+ R++EEGY+PSYGARPLRRAIMRLLEDS+AE++L+ IK+G
Sbjct: 750 VFGRLTEKGITLEVSDRFKGRLIEEGYSPSYGARPLRRAIMRLLEDSLAEEILSGRIKDG 809
Query: 661 DSVIVDVDSDGNVTV 675
D ++D+D +GNV V
Sbjct: 810 DVALIDIDENGNVQV 824
>gi|428223959|ref|YP_007108056.1| ATPase [Geitlerinema sp. PCC 7407]
gi|427983860|gb|AFY65004.1| ATPase AAA-2 domain protein [Geitlerinema sp. PCC 7407]
Length = 822
Score = 1036 bits (2680), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 509/678 (75%), Positives = 590/678 (87%), Gaps = 7/678 (1%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
M+GE+ E GG K PTL+E+G+NLT++A EGKLDPVVGRQ +IERV+QILGR
Sbjct: 141 MLGETAEV---STGGSQGRTKTPTLDEFGSNLTQMAAEGKLDPVVGRQKEIERVIQILGR 197
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNP LIGEPGVGKTAIAEGLAQRIA+ DVPD +E K+V+TLD+GLLVAGTKYRGEFE
Sbjct: 198 RTKNNPVLIGEPGVGKTAIAEGLAQRIANADVPDILEDKRVVTLDIGLLVAGTKYRGEFE 257
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
ERLKK+M+EI+ + +IL IDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTLD
Sbjct: 258 ERLKKIMDEIRSAGNVILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLD 317
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRKHIE+D ALERRFQPV V EPSV ETI+IL GLR+RYE HHKL+ +DEAL +AA+LS
Sbjct: 318 EYRKHIERDAALERRFQPVMVGEPSVQETIEILHGLRDRYEQHHKLKISDEALEAAAKLS 377
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
+YISDR+LPDKAIDLIDEAGSRVRL ++QLP A+EL++ELRQ+ KEK+EAVR QDF++
Sbjct: 378 DRYISDRYLPDKAIDLIDEAGSRVRLINSQLPPAAKELDRELRQVLKEKDEAVRSQDFDR 437
Query: 301 AGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVS 360
AGELRDREM++KA+I ++ K E + P VTE DI IV++WTG+PV K++
Sbjct: 438 AGELRDREMEIKAEIRSIAQN----RKNEGGTTEDSPFVTEEDIAQIVASWTGVPVNKLT 493
Query: 361 TDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 420
ES++LL ME+TLH R+IGQDEAVKA+SRAIRRARVGLKNPNRPIASFIFSGPTGVGK+
Sbjct: 494 ESESEKLLHMEDTLHNRLIGQDEAVKAVSRAIRRARVGLKNPNRPIASFIFSGPTGVGKT 553
Query: 421 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 480
EL KALA+Y+FGSE+AMIRLDMSE+MERHTVSKLIGSPPGYVGY EGGQLTEAVRRRPYT
Sbjct: 554 ELTKALASYFFGSEDAMIRLDMSEYMERHTVSKLIGSPPGYVGYNEGGQLTEAVRRRPYT 613
Query: 481 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI 540
VVLFDEIEKAHPDVFNM+LQILEDGRLTD+KGRTVDFKNTLLIMTSN+GS VIEKGG +
Sbjct: 614 VVLFDEIEKAHPDVFNMLLQILEDGRLTDAKGRTVDFKNTLLIMTSNIGSKVIEKGGGGL 673
Query: 541 GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 600
GF+ D+ DS YNRI+SLV EELKQYFRPEFLNR+DE+IVFRQL K EVKEIADIML E
Sbjct: 674 GFEFAEDQADSQYNRIRSLVNEELKQYFRPEFLNRVDEIIVFRQLKKDEVKEIADIMLHE 733
Query: 601 VFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEG 660
VF RL + I L+VTERF++R+VEEGYNPSYGARPLRRAIMRLLEDS+AE++L+ I+EG
Sbjct: 734 VFGRLGEQGIVLEVTERFKDRLVEEGYNPSYGARPLRRAIMRLLEDSLAEEILSGRIQEG 793
Query: 661 DSVIVDVDSDGNVTVLNG 678
D+ +VDVD +G V VL G
Sbjct: 794 DTAVVDVDEEGQVKVLPG 811
>gi|434393419|ref|YP_007128366.1| ATPase AAA-2 domain protein [Gloeocapsa sp. PCC 7428]
gi|428265260|gb|AFZ31206.1| ATPase AAA-2 domain protein [Gloeocapsa sp. PCC 7428]
Length = 825
Score = 1036 bits (2679), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 509/677 (75%), Positives = 597/677 (88%), Gaps = 7/677 (1%)
Query: 1 MVGESTEAVGAGVGGGSSG-NKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 59
M+GE+ E G SG K PTL+E+G+NLT++A EGKLDPVVGR +IERV+QILG
Sbjct: 141 MLGETAEV---SAGSSQSGRTKTPTLDEFGSNLTQMAAEGKLDPVVGRAKEIERVIQILG 197
Query: 60 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 119
RRTKNNP LIGEPGVGKTAIAEGLA RIA+ D+PD +E K+V+TLD+GLLVAGTKYRGEF
Sbjct: 198 RRTKNNPVLIGEPGVGKTAIAEGLASRIANKDIPDILEEKRVVTLDIGLLVAGTKYRGEF 257
Query: 120 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 179
EERLKK+M+EI+ + +IL IDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTL
Sbjct: 258 EERLKKIMDEIRSAGNVILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTL 317
Query: 180 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 239
DEYRKHIE+D ALERRFQPV V EPSVDETI+IL GLRERYE HHKL+ +DEALV+AA+L
Sbjct: 318 DEYRKHIERDAALERRFQPVMVGEPSVDETIEILYGLRERYEQHHKLKISDEALVAAAKL 377
Query: 240 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 299
S +YISDR+LPDKAIDLIDEAGSRVRL ++QLP A+EL+KELRQ+ KEK++AVR QDF+
Sbjct: 378 SDRYISDRYLPDKAIDLIDEAGSRVRLINSQLPPAAKELDKELRQVLKEKDDAVRSQDFD 437
Query: 300 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 359
+AGELRDREM++KA+I A+ + K S E E + PVVTE DI IV++WTG+PV K+
Sbjct: 438 RAGELRDREMEIKAEIRAIA-QSKTTSTREGE--NDSPVVTEEDIAQIVASWTGVPVNKL 494
Query: 360 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 419
+ ES++LL ME+TLH+R+IGQ++AVKA+S+AIRRARVGLKNPNRPIASF+FSGPTGVGK
Sbjct: 495 TETESEKLLHMEDTLHQRLIGQEDAVKAVSKAIRRARVGLKNPNRPIASFVFSGPTGVGK 554
Query: 420 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 479
+EL KALAAY+FGSEEAMIRLDMSE+MERHTVSKLIGSPPGYVGY EGGQLTEAVRRRPY
Sbjct: 555 TELTKALAAYFFGSEEAMIRLDMSEYMERHTVSKLIGSPPGYVGYNEGGQLTEAVRRRPY 614
Query: 480 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 539
TVVLFDEIEKAHPDVFNM+LQILEDGRLTD+KGRTVDFKNTLLI+TSN+GS VIEKGG
Sbjct: 615 TVVLFDEIEKAHPDVFNMLLQILEDGRLTDAKGRTVDFKNTLLILTSNIGSKVIEKGGGG 674
Query: 540 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 599
+GF+ ++ ++ YNRI+SLV EELKQYFRPEFLNRLDE+IVFRQLTK EVK+I+DI+LK
Sbjct: 675 LGFEFAENQAEAQYNRIRSLVNEELKQYFRPEFLNRLDEIIVFRQLTKDEVKQISDILLK 734
Query: 600 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 659
EVF RL K I L+VT+RF+ER+VEEGYNPSYGARPLRRAIMRLLEDS+AE++L+ IK+
Sbjct: 735 EVFVRLTEKGITLEVTDRFKERLVEEGYNPSYGARPLRRAIMRLLEDSLAEEILSGRIKD 794
Query: 660 GDSVIVDVDSDGNVTVL 676
GD+ +VDVD GNV VL
Sbjct: 795 GDTAVVDVDDTGNVKVL 811
>gi|22297851|ref|NP_681098.1| ATP-dependent Clp protease regulatory subunit [Thermosynechococcus
elongatus BP-1]
gi|22294028|dbj|BAC07860.1| ATP-dependent Clp protease regulatory subunit [Thermosynechococcus
elongatus BP-1]
Length = 824
Score = 1036 bits (2678), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 520/677 (76%), Positives = 597/677 (88%), Gaps = 9/677 (1%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
M+GE+ E V AG G + K PTL+E+G NLT+LA EGKLDPVVGRQ +IERV+QILGR
Sbjct: 141 MLGETAE-VTAGASQGRT--KTPTLDEFGVNLTQLAIEGKLDPVVGRQKEIERVIQILGR 197
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNP LIGEPGVGKTAIAEGLAQRIA+ DVPD +E K+V+TLD+GLLVAGTKYRGEFE
Sbjct: 198 RTKNNPVLIGEPGVGKTAIAEGLAQRIANKDVPDILEDKRVVTLDIGLLVAGTKYRGEFE 257
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
ERLKK+M+EI+Q+ +IL IDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTLD
Sbjct: 258 ERLKKIMDEIRQAGNVILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLD 317
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRKHIE+D ALERRFQPV V EPSV+ETI+IL GLRERYE HHKL+ +DEAL +AA+LS
Sbjct: 318 EYRKHIERDAALERRFQPVMVGEPSVEETIEILYGLRERYEKHHKLKISDEALEAAAKLS 377
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
+YISDR+LPDKAIDLIDEAGSRVRL ++QLP A+EL++ELRQ+ KEK++AVR Q+F+K
Sbjct: 378 DRYISDRYLPDKAIDLIDEAGSRVRLINSQLPPAAKELDRELRQVLKEKDDAVRAQNFDK 437
Query: 301 AGELRDREMDLKAQISALVDKGKEMSKAETEAG-DVGPVVTEVDIQHIVSAWTGIPVEKV 359
AGELRDREM+LKAQI A+ + KAE G + PVVTE DI HIV++WTG+PV K+
Sbjct: 438 AGELRDREMELKAQIRAIA----QQKKAEIANGEEETPVVTEEDIAHIVASWTGVPVSKL 493
Query: 360 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 419
+ ES++LL MEETLH+RVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK
Sbjct: 494 TESESEKLLHMEETLHQRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 553
Query: 420 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 479
+EL KALAAY+FGSEEAMIRLDMSE+MERHTVSKLIGSPPGYVGY EGGQLTEAVRRRPY
Sbjct: 554 TELTKALAAYFFGSEEAMIRLDMSEYMERHTVSKLIGSPPGYVGYNEGGQLTEAVRRRPY 613
Query: 480 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 539
TVVLFDEIEKAHPDVFN++LQILEDGRLTDSKGRTVDFKNTLLIMTSN+GS VIEKG
Sbjct: 614 TVVLFDEIEKAHPDVFNLLLQILEDGRLTDSKGRTVDFKNTLLIMTSNIGSKVIEKGAAG 673
Query: 540 IGFDLDY-DEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIML 598
+GF+ D +S YNRI+SLV EELKQYFRPEFLNRLDE+IVFRQLTK EVK+IADI+L
Sbjct: 674 LGFEFGTEDAAESQYNRIRSLVNEELKQYFRPEFLNRLDEIIVFRQLTKDEVKQIADILL 733
Query: 599 KEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIK 658
KEVF RL K I L+VTERF+ER+++EGYNPSYGARPLRRAIMRLLED++AE+ML+ I+
Sbjct: 734 KEVFSRLTEKGITLEVTERFKERLIDEGYNPSYGARPLRRAIMRLLEDTLAEEMLSGRIR 793
Query: 659 EGDSVIVDVDSDGNVTV 675
EGD+ ++DVD G V +
Sbjct: 794 EGDTALIDVDESGQVKI 810
>gi|427734429|ref|YP_007053973.1| chaperone ATPase [Rivularia sp. PCC 7116]
gi|427369470|gb|AFY53426.1| ATPase with chaperone activity, ATP-binding subunit [Rivularia sp.
PCC 7116]
Length = 831
Score = 1035 bits (2677), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 508/675 (75%), Positives = 592/675 (87%), Gaps = 7/675 (1%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
M+GE+ E G G NK PTL+E+G+NLT++A +GKLDPVVGR +IERV+QILGR
Sbjct: 141 MLGETAEVTATGQSGR---NKTPTLDEFGSNLTQMALDGKLDPVVGRAKEIERVIQILGR 197
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNP LIGEPGVGKTAIAEGLAQRI + DVPD +E K+V+TLD+GLLVAGTKYRGEFE
Sbjct: 198 RTKNNPVLIGEPGVGKTAIAEGLAQRIGNKDVPDILEEKRVVTLDIGLLVAGTKYRGEFE 257
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
ERLKK+M+EI+Q+ +IL IDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTLD
Sbjct: 258 ERLKKIMDEIRQAGNVILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLD 317
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRKHIE+D ALERRFQPV V EPSVDETI+IL GLR+RYE HHKL+ +DEA+++AA+LS
Sbjct: 318 EYRKHIERDAALERRFQPVMVGEPSVDETIEILYGLRDRYEQHHKLKISDEAVLAAAKLS 377
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
+YISDR+LPDKAIDLIDEAGSRVRL ++QLP A+EL+KELR+I KEK++AVR QDF+K
Sbjct: 378 DRYISDRYLPDKAIDLIDEAGSRVRLINSQLPPAAKELDKELRKILKEKDDAVRSQDFDK 437
Query: 301 AGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVS 360
AGELRDREM++KA+I A+ S A E PVVTE DI HIV++WTG+PV K++
Sbjct: 438 AGELRDREMEIKAEIRAIAQSKAGTSGANGEE----PVVTEEDIAHIVASWTGVPVNKLT 493
Query: 361 TDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 420
ES++LL ME+TLH+R+IGQ++AVKA+SRAIRRARVGLKNPNRPIASF+FSGPTGVGK+
Sbjct: 494 ESESEKLLHMEDTLHQRLIGQEDAVKAVSRAIRRARVGLKNPNRPIASFVFSGPTGVGKT 553
Query: 421 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 480
ELAK+LA+Y+FGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGY EGGQLTEAVRRRPYT
Sbjct: 554 ELAKSLASYFFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYNEGGQLTEAVRRRPYT 613
Query: 481 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI 540
VVLFDEIEKAHPDVFNM+LQILEDGRLTD+KGRTVDFKNTLLI+TSN+GS VIEKGG I
Sbjct: 614 VVLFDEIEKAHPDVFNMLLQILEDGRLTDAKGRTVDFKNTLLILTSNIGSKVIEKGGGGI 673
Query: 541 GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 600
GF+ D +S YNRIKSLV EELKQYFRPEFLNRLDE+IVFRQL + EV IADIMLKE
Sbjct: 674 GFEFAEDASESQYNRIKSLVNEELKQYFRPEFLNRLDEIIVFRQLNREEVMLIADIMLKE 733
Query: 601 VFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEG 660
VF RL K I+L+V++RF+ER+++EGYNPSYGARPLRRAIMRLLEDS+AE++L+ I EG
Sbjct: 734 VFGRLTEKGIKLEVSDRFKERLLQEGYNPSYGARPLRRAIMRLLEDSLAEEILSGRIGEG 793
Query: 661 DSVIVDVDSDGNVTV 675
D+ IVDVD GN+ V
Sbjct: 794 DTAIVDVDEGGNILV 808
>gi|299890930|gb|ADJ57429.1| clp protease ATP binding subunit [uncultured prymnesiophyte C19847]
Length = 817
Score = 1035 bits (2677), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 500/679 (73%), Positives = 592/679 (87%), Gaps = 7/679 (1%)
Query: 2 VGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRR 61
+G++ EA VGG S+ +K PTLEE+GTNLT+ A EG+LDPVVGR +IERV+QILGRR
Sbjct: 142 LGDNAEAT---VGGSSTKSKSPTLEEFGTNLTQKAVEGRLDPVVGRAKEIERVIQILGRR 198
Query: 62 TKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEE 121
TKNNP LIGEPGVGKTAIAEGLAQRIA+ D+PDT+E K+V+ LD+GLL+AGTKYRGEFEE
Sbjct: 199 TKNNPVLIGEPGVGKTAIAEGLAQRIANRDIPDTLEDKRVVALDIGLLIAGTKYRGEFEE 258
Query: 122 RLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDE 181
RLKK+M+E++ ++ +IL IDEVHTLIGAGAAEGAIDAANILKP+L+RGELQCIGATTL+E
Sbjct: 259 RLKKIMDEVRTANNVILIIDEVHTLIGAGAAEGAIDAANILKPALSRGELQCIGATTLEE 318
Query: 182 YRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSY 241
YRKHIEKD ALERRFQPV V EPSV+ETI+IL GLR+RYE HHKL +D+AL +AA+ S
Sbjct: 319 YRKHIEKDAALERRFQPVMVGEPSVEETIEILYGLRDRYEKHHKLVISDDALAAAAKFSD 378
Query: 242 QYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKA 301
QYI+DRFLPDKAIDLIDEAGSRVRL ++QLP A+EL+ ELR+I K K+EAVR QDFEKA
Sbjct: 379 QYIADRFLPDKAIDLIDEAGSRVRLMNSQLPAAAKELDGELREILKTKDEAVRAQDFEKA 438
Query: 302 GELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVST 361
G+LR+REM++KAQI+A+ + K +E + P VTE DI IV+AWT IPV K++
Sbjct: 439 GQLREREMEIKAQINAIA----QSKKGASETSTITPTVTEEDIAQIVAAWTSIPVNKLTK 494
Query: 362 DESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSE 421
ES++LLKME+TLH R+IGQDEAV A+SRAIRRARVGLKNPNRPIASFIFSGPTGVGK+E
Sbjct: 495 SESEKLLKMEDTLHSRIIGQDEAVVAVSRAIRRARVGLKNPNRPIASFIFSGPTGVGKTE 554
Query: 422 LAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTV 481
L KALA Y+FGSE+AM+RLDMSE+MERHTVSKLIGSPPGYVGY EGGQLTEAVRRRPYTV
Sbjct: 555 LTKALATYFFGSEDAMVRLDMSEYMERHTVSKLIGSPPGYVGYNEGGQLTEAVRRRPYTV 614
Query: 482 VLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIG 541
VLFDE+EKAHPDVFN+MLQI EDGRL+DSKGRT+DFKNTLLIMTSN+GS VIEKGG +G
Sbjct: 615 VLFDEVEKAHPDVFNLMLQIFEDGRLSDSKGRTIDFKNTLLIMTSNIGSKVIEKGGGGLG 674
Query: 542 FDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEV 601
F+L D+ S YNRIKSLV EELKQYFRPEFLNRLDE+IVFRQLTK EV +IA+IMLKEV
Sbjct: 675 FELSEDQTSSHYNRIKSLVNEELKQYFRPEFLNRLDEIIVFRQLTKDEVGQIAEIMLKEV 734
Query: 602 FDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGD 661
FDR+ K I+L+VT+RF+ R+++EGYNP+YGARPLRRA+MRLLEDS+AE++L+ +IK GD
Sbjct: 735 FDRISVKGIQLEVTDRFKTRLIDEGYNPAYGARPLRRAVMRLLEDSLAEEVLSEKIKAGD 794
Query: 662 SVIVDVDSDGNVTVLNGSS 680
+ +VDV DG V VL G +
Sbjct: 795 TAVVDVGEDGKVKVLLGDT 813
>gi|186686024|ref|YP_001869220.1| ATPase [Nostoc punctiforme PCC 73102]
gi|186468476|gb|ACC84277.1| ATPase AAA-2 domain protein [Nostoc punctiforme PCC 73102]
Length = 822
Score = 1035 bits (2677), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 505/675 (74%), Positives = 593/675 (87%), Gaps = 7/675 (1%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
M+GE+ E GG S K PTL+E+G+NLT++A + KLDPVVGR +IERV+QILGR
Sbjct: 141 MLGETAEV---SPGGSSGRTKTPTLDEFGSNLTQMAIDNKLDPVVGRAKEIERVIQILGR 197
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNP LIGEPGVGKTAIAEGLA RIA+ DVPD +E K+V+TLD+GLLVAGTKYRGEFE
Sbjct: 198 RTKNNPVLIGEPGVGKTAIAEGLASRIATKDVPDILEDKRVVTLDIGLLVAGTKYRGEFE 257
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
ERLKK+M+EI+ + +IL IDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTLD
Sbjct: 258 ERLKKIMDEIRSAGNVILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLD 317
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRKHIE+D ALERRFQPV V EP+VDETI+IL GLRERYE HHKL+ +DEALV+AA+LS
Sbjct: 318 EYRKHIERDAALERRFQPVMVGEPTVDETIEILYGLRERYEQHHKLKISDEALVAAAKLS 377
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
+YISDR+LPDKAIDL+DEAGSRVRL ++QLP A+EL+KELRQI KEK++AVR QDF+K
Sbjct: 378 DRYISDRYLPDKAIDLVDEAGSRVRLINSQLPPAAKELDKELRQILKEKDDAVRSQDFDK 437
Query: 301 AGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVS 360
AGELRDREM++KA+I A+ + E E PVVTE DI HIV++WTG+PV K++
Sbjct: 438 AGELRDREMEIKAEIRAIAQSKTNATGTEGEE----PVVTEEDIAHIVASWTGVPVNKLT 493
Query: 361 TDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 420
ES++LL ME+TLH+R+IGQDEAV+A+SRAIRRARVGLKNPNRPIASF+FSGPTGVGK+
Sbjct: 494 ESESEKLLHMEDTLHQRLIGQDEAVRAVSRAIRRARVGLKNPNRPIASFVFSGPTGVGKT 553
Query: 421 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 480
ELAK+LAAY+FGSEEAMIRLDMSE+MERHTVSKLIGSPPGYVGY EGGQLTEAVRRRPYT
Sbjct: 554 ELAKSLAAYFFGSEEAMIRLDMSEYMERHTVSKLIGSPPGYVGYNEGGQLTEAVRRRPYT 613
Query: 481 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI 540
VVLFDEIEKAHPDVFNM+LQILEDGRLTD+KGRTVDFKNTLLI+TSN+GS VIEKGG I
Sbjct: 614 VVLFDEIEKAHPDVFNMLLQILEDGRLTDAKGRTVDFKNTLLILTSNIGSKVIEKGGSGI 673
Query: 541 GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 600
GF+ D +S+YNRI+SLV EELKQYFRPEFLNRLDE+IVFRQL+K EV +IA+IMLKE
Sbjct: 674 GFEFSEDASESTYNRIRSLVNEELKQYFRPEFLNRLDEIIVFRQLSKPEVTQIAEIMLKE 733
Query: 601 VFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEG 660
VF RL K I L+VT+RF++R+++EGY+PSYGARPLRRAIMRLLEDS+AE++L+ IK+G
Sbjct: 734 VFGRLTEKGITLEVTDRFKDRLIQEGYSPSYGARPLRRAIMRLLEDSLAEEILSGRIKDG 793
Query: 661 DSVIVDVDSDGNVTV 675
D+ +VDVD +G V V
Sbjct: 794 DTALVDVDENGVVQV 808
>gi|75907133|ref|YP_321429.1| UvrB/UvrC protein [Anabaena variabilis ATCC 29413]
gi|75700858|gb|ABA20534.1| UvrB/UvrC protein [Anabaena variabilis ATCC 29413]
Length = 823
Score = 1035 bits (2677), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 502/675 (74%), Positives = 593/675 (87%), Gaps = 7/675 (1%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
M+GE+ E G G + K PTL+E+G+NLT++A + KLDPVVGR +IERV+QILGR
Sbjct: 141 MLGETAEVSATGQSGRT---KTPTLDEFGSNLTQMATDNKLDPVVGRAKEIERVIQILGR 197
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNP LIGEPGVGKTAIAEGLA RIA+ DVPD +E K+V+TLD+GLLVAGTKYRGEFE
Sbjct: 198 RTKNNPVLIGEPGVGKTAIAEGLASRIANKDVPDILEDKRVVTLDIGLLVAGTKYRGEFE 257
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
ERLKK+M+EI+Q+ +IL IDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTLD
Sbjct: 258 ERLKKIMDEIRQAGNVILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLD 317
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRKHIE+D ALERRFQPV V EPSVDETI+IL GLR+RYE HHKL+ +DEALV+AA+LS
Sbjct: 318 EYRKHIERDAALERRFQPVMVGEPSVDETIEILYGLRDRYEQHHKLKISDEALVAAAKLS 377
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
+YISDR+LPDKAIDL+DEAGSRVRL ++QLP A+EL+KELRQI KEK++AVR QDF++
Sbjct: 378 DRYISDRYLPDKAIDLVDEAGSRVRLMNSQLPPAAKELDKELRQILKEKDDAVRSQDFDR 437
Query: 301 AGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVS 360
AGELRDREM++KA+I A+ S E + PVVTE DI HIV++WTG+PV K++
Sbjct: 438 AGELRDREMEIKAEIRAIAQSKTNASGTEGQE----PVVTEEDIAHIVASWTGVPVNKLT 493
Query: 361 TDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 420
ES++LL ME+TLH+R+IGQ++AVKA+SRAIRRARVGLKNPNRPIASF+FSGPTGVGK+
Sbjct: 494 ESESEKLLHMEDTLHQRLIGQEDAVKAVSRAIRRARVGLKNPNRPIASFVFSGPTGVGKT 553
Query: 421 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 480
ELAK+LA+Y+FGSEEAMIRLDMSE+MERHTVSKLIGSPPGYVGY EGGQLTEAVRRRPYT
Sbjct: 554 ELAKSLASYFFGSEEAMIRLDMSEYMERHTVSKLIGSPPGYVGYNEGGQLTEAVRRRPYT 613
Query: 481 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI 540
VVLFDEIEKAHPDVFNM+LQILEDGRLTD+KGRTVDFKNTLLI+TSN+GS VIEKGG I
Sbjct: 614 VVLFDEIEKAHPDVFNMLLQILEDGRLTDAKGRTVDFKNTLLILTSNIGSKVIEKGGGGI 673
Query: 541 GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 600
GF+ D+ ++ YNRI+SLV EELKQYFRPEFLNRLDE+IVFRQL+K EV EIADIMLKE
Sbjct: 674 GFEFSEDQTETQYNRIRSLVNEELKQYFRPEFLNRLDEIIVFRQLSKAEVTEIADIMLKE 733
Query: 601 VFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEG 660
VF RL K I L+V++RF+ R++EEGY+PSYGARPLRRAIMRLLEDS+AE++L+ IK+G
Sbjct: 734 VFGRLTEKGITLEVSDRFKGRLIEEGYSPSYGARPLRRAIMRLLEDSLAEEILSGRIKDG 793
Query: 661 DSVIVDVDSDGNVTV 675
D ++D+D +GNV V
Sbjct: 794 DVALIDIDDNGNVQV 808
>gi|428203900|ref|YP_007082489.1| chaperone ATPase [Pleurocapsa sp. PCC 7327]
gi|427981332|gb|AFY78932.1| ATPase with chaperone activity, ATP-binding subunit [Pleurocapsa
sp. PCC 7327]
Length = 821
Score = 1034 bits (2674), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 503/678 (74%), Positives = 597/678 (88%), Gaps = 8/678 (1%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
M+GE+ E + G K PTL+E+G+NLT++A EGKLDPVVGRQ +IERV+QILGR
Sbjct: 141 MLGETAEV--STTPGAQGRTKTPTLDEFGSNLTQMASEGKLDPVVGRQKEIERVIQILGR 198
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNP LIGEPGVGKTAIAEGLAQRIA+ DVPD +E K+V+TLD+GLLVAGTKYRGEFE
Sbjct: 199 RTKNNPVLIGEPGVGKTAIAEGLAQRIANKDVPDILEEKRVVTLDIGLLVAGTKYRGEFE 258
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
ERLKK+M+EI+Q+ +IL IDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTLD
Sbjct: 259 ERLKKIMDEIRQAGNVILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLD 318
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRKHIE+D ALERRFQPV V EP+V+ETI+IL GLRERYE HHKL+ DEAL +AA+LS
Sbjct: 319 EYRKHIERDAALERRFQPVMVGEPTVEETIEILYGLRERYEQHHKLKILDEALEAAAKLS 378
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
+YISDR+LPDKAIDLIDEAGSRVRL ++QLP A+EL+KELRQI K+K++AVR QDF++
Sbjct: 379 DRYISDRYLPDKAIDLIDEAGSRVRLINSQLPPAAKELDKELRQILKQKDDAVRAQDFDR 438
Query: 301 AGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVS 360
AGELRDREM++K+QI A+ SK GD PVVT +I +IV++WTG+PV K++
Sbjct: 439 AGELRDREMEIKSQIRAIAS-----SKKNEGEGD-EPVVTAEEIANIVASWTGVPVNKLT 492
Query: 361 TDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 420
ES++LL ME+TLH+R+IGQ++AVKA+SRAIRRARVGLKNPNRPIASFIFSGPTGVGK+
Sbjct: 493 ETESEKLLHMEDTLHQRLIGQEDAVKAVSRAIRRARVGLKNPNRPIASFIFSGPTGVGKT 552
Query: 421 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 480
EL KALAAY+FGSEEAMIRLDMSE+MERHTVSKLIGSPPGYVGY EGGQLTEAVRRRPYT
Sbjct: 553 ELTKALAAYFFGSEEAMIRLDMSEYMERHTVSKLIGSPPGYVGYNEGGQLTEAVRRRPYT 612
Query: 481 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI 540
VVLFDEIEKAHPDVFNM+LQILEDGRLTD+KGRTVDFKNTLLIMTSN+GS VIEKGG R+
Sbjct: 613 VVLFDEIEKAHPDVFNMLLQILEDGRLTDAKGRTVDFKNTLLIMTSNIGSKVIEKGGDRL 672
Query: 541 GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 600
GF+ + D+ ++ YNRI+SLV EELKQYFRPEFLNR+DE+IVFRQLTK EVK+IADI+LK+
Sbjct: 673 GFEFEVDQAEAQYNRIRSLVNEELKQYFRPEFLNRIDEIIVFRQLTKEEVKQIADILLKQ 732
Query: 601 VFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEG 660
VF RL ++I L+VTE+F+ER+VEEGYNP+YGARPLRRAIMRLLED +AE++L+ I+EG
Sbjct: 733 VFARLTEQNINLEVTEKFKERLVEEGYNPAYGARPLRRAIMRLLEDVLAEEILSGRIQEG 792
Query: 661 DSVIVDVDSDGNVTVLNG 678
D+ + D+D +G V ++ G
Sbjct: 793 DTAVADIDEEGKVKIVLG 810
>gi|428220165|ref|YP_007104335.1| chaperone ATPase [Synechococcus sp. PCC 7502]
gi|427993505|gb|AFY72200.1| ATPase with chaperone activity, ATP-binding subunit [Synechococcus
sp. PCC 7502]
Length = 828
Score = 1034 bits (2674), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 511/684 (74%), Positives = 597/684 (87%), Gaps = 8/684 (1%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
M+GE+ E V AG GGG + K PTL+E+G+NLT+LA EGKLDPVVGRQ +IERV+QILGR
Sbjct: 141 MLGETAE-VSAGGGGGRT--KTPTLDEFGSNLTQLAMEGKLDPVVGRQKEIERVIQILGR 197
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNP LIGEPGVGKTAIAEGLAQRI SGD+PD ++ K+V+TLD+GLLVAGTKYRGEFE
Sbjct: 198 RTKNNPVLIGEPGVGKTAIAEGLAQRITSGDIPDILQDKRVVTLDIGLLVAGTKYRGEFE 257
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
ERLKK+M+EI+ S+ +IL IDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTLD
Sbjct: 258 ERLKKIMDEIRSSNNVILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLD 317
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRKHIE+D ALERRFQPV V EPSV+ETI+IL GLRERYE HHKL+ +D A+ +AA+LS
Sbjct: 318 EYRKHIERDAALERRFQPVMVGEPSVEETIEILFGLRERYEQHHKLKISDLAIDAAAKLS 377
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
+YISDRFLPDKAIDLIDEAGSRVRL ++QLP A+EL+KELRQ+ K+K++AVR QDF+K
Sbjct: 378 DRYISDRFLPDKAIDLIDEAGSRVRLLNSQLPPAAKELDKELRQLLKDKDDAVRSQDFDK 437
Query: 301 AGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVS 360
A +LRDRE+++K +I L + KAET DV PVVTE DI HIVS+WTG+PV K++
Sbjct: 438 AAKLRDRELEIKQEIRNL----SQAKKAETTKDDVVPVVTEEDIAHIVSSWTGVPVSKLT 493
Query: 361 TDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 420
ES +L++MEETLH+R+IGQ+EAVKA SRAIRRARVGLKNPNRPIASFIFSGPTGVGK+
Sbjct: 494 ESESLKLMQMEETLHQRLIGQEEAVKATSRAIRRARVGLKNPNRPIASFIFSGPTGVGKT 553
Query: 421 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 480
EL KALAAY+FGSEEAM+RLDMSEFMERHTVSKLIGSPPGYVGY EGGQLTEAVRRRPYT
Sbjct: 554 ELTKALAAYFFGSEEAMVRLDMSEFMERHTVSKLIGSPPGYVGYNEGGQLTEAVRRRPYT 613
Query: 481 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI 540
V+LFDEIEKAHPDVFN++LQILEDGRLTDSKGRTVDFKNTL+IMTSN+GS VIEKGG +
Sbjct: 614 VILFDEIEKAHPDVFNLLLQILEDGRLTDSKGRTVDFKNTLIIMTSNIGSKVIEKGGGGL 673
Query: 541 GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 600
GFD D+ DS+Y RI+SLV EELKQYFRPEFLNRLDE+IVFRQL E++EIA++ML E
Sbjct: 674 GFDFAEDQADSAYTRIRSLVNEELKQYFRPEFLNRLDEIIVFRQLKIEEIREIAELMLNE 733
Query: 601 VFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEG 660
V+ RLK K+I L VTERF++ +V EGYN SYGARPLRRAIMRLLEDS++E++L ++++G
Sbjct: 734 VYKRLKEKNITLAVTERFKDLLVREGYNQSYGARPLRRAIMRLLEDSLSEEILTGKVRDG 793
Query: 661 DSVIVDVDSDGNVTVLNGSSG-AP 683
SVIVDVD DG V + S AP
Sbjct: 794 ASVIVDVDDDGKVICVEQPSAIAP 817
>gi|427706010|ref|YP_007048387.1| ATPase [Nostoc sp. PCC 7107]
gi|427358515|gb|AFY41237.1| ATPase AAA-2 domain protein [Nostoc sp. PCC 7107]
Length = 823
Score = 1034 bits (2674), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 505/676 (74%), Positives = 593/676 (87%), Gaps = 9/676 (1%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
M+GE+ E G G + K PTL+E+G+NLT++A + KLDPVVGR +IERV+QILGR
Sbjct: 141 MLGETAEVSATGQSGRT---KTPTLDEFGSNLTQMATDNKLDPVVGRAKEIERVIQILGR 197
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNP LIGEPGVGKTAIAEGLA RIA+ DVPD +E K+V+TLD+GLLVAGTKYRGEFE
Sbjct: 198 RTKNNPVLIGEPGVGKTAIAEGLASRIANKDVPDILEDKRVVTLDIGLLVAGTKYRGEFE 257
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
ERLKK+M+EI+ + +IL IDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTLD
Sbjct: 258 ERLKKIMDEIRSAGNVILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLD 317
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRKHIE+D ALERRFQPV V EPSVDETI+IL GLR+RYE HHKL+ +DEAL++AA+LS
Sbjct: 318 EYRKHIERDAALERRFQPVMVGEPSVDETIEILHGLRDRYEQHHKLKISDEALIAAAKLS 377
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
+YISDR+LPDKAIDLIDEAGSRVRL ++QLP A+EL+KELRQI KEK++AVR QDF++
Sbjct: 378 DRYISDRYLPDKAIDLIDEAGSRVRLINSQLPPAAKELDKELRQILKEKDDAVRSQDFDR 437
Query: 301 AGELRDREMDLKAQISALVDKGKEMSKAETEAGD-VGPVVTEVDIQHIVSAWTGIPVEKV 359
AGELRDREM++KA+I A+ SK +GD V PVVTE DI HIV++WTG+PV K+
Sbjct: 438 AGELRDREMEIKAEIRAIAQ-----SKTNGASGDGVEPVVTEEDIAHIVASWTGVPVNKL 492
Query: 360 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 419
+ ES++LL ME+TLH+R+IGQ++AVKA+SRAIRRARVGLKNPNRPIASFIFSGPTGVGK
Sbjct: 493 TESESEKLLHMEDTLHQRLIGQEDAVKAVSRAIRRARVGLKNPNRPIASFIFSGPTGVGK 552
Query: 420 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 479
+ELAK+LA+Y+FGSEEAMIRLDMSE+MERHTVSKLIGSPPGYVGY EGGQLTEAVRRRPY
Sbjct: 553 TELAKSLASYFFGSEEAMIRLDMSEYMERHTVSKLIGSPPGYVGYNEGGQLTEAVRRRPY 612
Query: 480 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 539
TVVLFDEIEKAHPDVFNM+LQILEDGRLTD+KGRTVDFKNTLLI+TSN+GS VIEKG
Sbjct: 613 TVVLFDEIEKAHPDVFNMLLQILEDGRLTDAKGRTVDFKNTLLILTSNIGSKVIEKGAST 672
Query: 540 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 599
IGF+ D +S YNRIK+LV EELKQYFRPEFLNRLDE+IVFRQL + EV +IADIMLK
Sbjct: 673 IGFEFTEDAGESQYNRIKTLVNEELKQYFRPEFLNRLDEIIVFRQLNREEVTQIADIMLK 732
Query: 600 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 659
EVF RL K I L+VTERF++R+++EGY+PSYGARPLRRAIMRLLEDS+AE++L+ IK+
Sbjct: 733 EVFGRLTEKGITLEVTERFKDRLIQEGYSPSYGARPLRRAIMRLLEDSLAEEILSGRIKD 792
Query: 660 GDSVIVDVDSDGNVTV 675
GD+ +VDVD +G V V
Sbjct: 793 GDTAVVDVDENGTVQV 808
>gi|428210348|ref|YP_007094701.1| ATPase [Chroococcidiopsis thermalis PCC 7203]
gi|428012269|gb|AFY90832.1| ATPase AAA-2 domain protein [Chroococcidiopsis thermalis PCC 7203]
Length = 824
Score = 1034 bits (2673), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 510/678 (75%), Positives = 596/678 (87%), Gaps = 7/678 (1%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
M+GE+ E V AG G + K PTL+E+G+NLT++A EGKLDPVVGR+ +IERV+QILGR
Sbjct: 141 MLGETAE-VSAGSQSGRT--KTPTLDEFGSNLTQMAGEGKLDPVVGREKEIERVIQILGR 197
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNP LIGEPGVGKTAIAEGLA RIA+ DVPD +E K+V+TLD+GLLVAGTKYRGEFE
Sbjct: 198 RTKNNPVLIGEPGVGKTAIAEGLASRIANKDVPDILEEKRVVTLDIGLLVAGTKYRGEFE 257
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
ERLKK+M+EI+ + +IL IDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTLD
Sbjct: 258 ERLKKIMDEIRSAGNVILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLD 317
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRKHIE+D ALERRFQPV V EPSVDETI+IL GLR+RYE HHKL+ +D AL +AA+LS
Sbjct: 318 EYRKHIERDAALERRFQPVMVGEPSVDETIEILFGLRDRYEQHHKLKISDAALEAAAKLS 377
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
+YISDR+LPDKAIDLIDEAGSRVRL ++QLP A+EL+KELRQ+ KEK++AVR QDF++
Sbjct: 378 DRYISDRYLPDKAIDLIDEAGSRVRLINSQLPPAAKELDKELRQVLKEKDDAVRTQDFDR 437
Query: 301 AGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVS 360
AGELRDREM+L+A+I A+ +K+E GD PVVTE DI IV++WTG+PV K++
Sbjct: 438 AGELRDREMELRAEIRAIAQSKTGTTKSE---GDDSPVVTEEDIAQIVASWTGVPVNKLT 494
Query: 361 TDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 420
ES++LL ME+TLH+R+IGQ+EAV+A+S+AIRRARVGLKNPNRPIASF+FSGPTGVGK+
Sbjct: 495 ESESEKLLHMEDTLHQRLIGQEEAVRAVSKAIRRARVGLKNPNRPIASFVFSGPTGVGKT 554
Query: 421 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 480
EL K+LAAY+FGSE+AMIRLDMSE+MERHTVSKLIGSPPGYVGY EGGQLTEAVRRRPYT
Sbjct: 555 ELTKSLAAYFFGSEDAMIRLDMSEYMERHTVSKLIGSPPGYVGYNEGGQLTEAVRRRPYT 614
Query: 481 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI 540
VVLFDEIEKAHPDVFNM+LQILEDGRLTD+KGRTVDFKNTL+I+TSN+GS VIEKGG I
Sbjct: 615 VVLFDEIEKAHPDVFNMLLQILEDGRLTDAKGRTVDFKNTLIILTSNIGSKVIEKGGGGI 674
Query: 541 GFDLDY-DEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 599
GF+ D ++ YNRI+SLV EELKQYFRPEFLNRLDE+IVFRQL+K EVKEIADIMLK
Sbjct: 675 GFEFSSEDAAETQYNRIRSLVNEELKQYFRPEFLNRLDEIIVFRQLSKAEVKEIADIMLK 734
Query: 600 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 659
EVF RL K I L VTERF++R+VEEGYNPSYGARPLRRAIMRLLEDS+AE++L+ IKE
Sbjct: 735 EVFGRLTEKGITLTVTERFKDRLVEEGYNPSYGARPLRRAIMRLLEDSLAEEILSGRIKE 794
Query: 660 GDSVIVDVDSDGNVTVLN 677
GD +VDVD GNV VL+
Sbjct: 795 GDEAVVDVDDTGNVKVLS 812
>gi|332706083|ref|ZP_08426155.1| ATPase with chaperone activity, ATP-binding subunit [Moorea
producens 3L]
gi|332355175|gb|EGJ34643.1| ATPase with chaperone activity, ATP-binding subunit [Moorea
producens 3L]
Length = 822
Score = 1033 bits (2671), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 502/675 (74%), Positives = 598/675 (88%), Gaps = 7/675 (1%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
M+GE+ E V AG G + K PTL+E+G+NLT++A EGKLDPVVGR+ +IERV+QILGR
Sbjct: 141 MLGETAE-VTAGASQGRT--KTPTLDEFGSNLTQMASEGKLDPVVGREKEIERVIQILGR 197
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNP LIGEPGVGKTAIAEGLAQRIA+ DVPD +E K+V+TLD+GLLVAGTKYRGEFE
Sbjct: 198 RTKNNPVLIGEPGVGKTAIAEGLAQRIANNDVPDILEEKRVVTLDIGLLVAGTKYRGEFE 257
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
ERLKK+M+EI+Q+ +IL IDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTLD
Sbjct: 258 ERLKKIMDEIRQASNVILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLD 317
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRKHIE+D ALERRFQPV V EPSV+ETI+IL GLRERYE HHKL+ +DEAL +AA LS
Sbjct: 318 EYRKHIERDAALERRFQPVMVGEPSVEETIEILYGLRERYEQHHKLKISDEALEAAANLS 377
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
+YISDR+LPDKAIDLIDEAGSRVRL ++QLP A+EL+KELRQ+ KEK++AVR QDF++
Sbjct: 378 DRYISDRYLPDKAIDLIDEAGSRVRLINSQLPPAAKELDKELRQVLKEKDDAVRSQDFDR 437
Query: 301 AGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVS 360
AGELRDREM++KA+I ++ + K+E+ D P+V E DI HIV++WTG+PV+K++
Sbjct: 438 AGELRDREMEIKAEIRSIA----QSKKSESRGTDESPIVDEEDIAHIVASWTGVPVQKLT 493
Query: 361 TDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 420
ES++LL ME+TLH+R+IGQ++AVKA+SRAIRRARVGLKNPNRPIASF+FSGPTGVGK+
Sbjct: 494 ESESEKLLHMEDTLHQRLIGQEDAVKAVSRAIRRARVGLKNPNRPIASFVFSGPTGVGKT 553
Query: 421 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 480
ELAK+LAAY+FGSEEAM+RLDMSE+MERHTVSKL+GSPPGYVGY EGGQLTEAVRRRPYT
Sbjct: 554 ELAKSLAAYFFGSEEAMVRLDMSEYMERHTVSKLVGSPPGYVGYNEGGQLTEAVRRRPYT 613
Query: 481 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI 540
VVLFDEIEKAHPDVFNM+LQILEDGRLTDSKGRTVDFKNTLLIMTSN+GS VIEKGG ++
Sbjct: 614 VVLFDEIEKAHPDVFNMLLQILEDGRLTDSKGRTVDFKNTLLIMTSNIGSKVIEKGGGQL 673
Query: 541 GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 600
GF+ ++ +S YNRI++LV EELKQYFRPEFLNRLDE+IVFRQLTK EVK+IA I+LKE
Sbjct: 674 GFEFSDNQAESQYNRIRNLVNEELKQYFRPEFLNRLDEIIVFRQLTKEEVKDIAKILLKE 733
Query: 601 VFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEG 660
VF RL + I L+V+E+F++R++EEGYNPSYGARPLRRAIMRLLED +AE++L+ IKEG
Sbjct: 734 VFGRLYEQGITLEVSEKFKDRLIEEGYNPSYGARPLRRAIMRLLEDVLAEEILSSRIKEG 793
Query: 661 DSVIVDVDSDGNVTV 675
D VDV+ +G V V
Sbjct: 794 DIAYVDVNEEGKVQV 808
>gi|428313889|ref|YP_007124866.1| chaperone ATPase [Microcoleus sp. PCC 7113]
gi|428255501|gb|AFZ21460.1| ATPase with chaperone activity, ATP-binding subunit [Microcoleus
sp. PCC 7113]
Length = 822
Score = 1033 bits (2670), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 509/679 (74%), Positives = 591/679 (87%), Gaps = 9/679 (1%)
Query: 1 MVGESTEAVGAGVGGGSSG-NKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 59
M+GE+ E G S G K PTL+E+G+NLT++A EGKLDPVVGR +IERV+QILG
Sbjct: 141 MLGETAEVTS----GASQGRTKTPTLDEFGSNLTQMAGEGKLDPVVGRAKEIERVIQILG 196
Query: 60 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 119
RRTKNNP LIGEPGVGKTAIAEGLAQRIA+ DVPD +E K+V+TLD+GLLVAGTKYRGEF
Sbjct: 197 RRTKNNPVLIGEPGVGKTAIAEGLAQRIANNDVPDILEEKRVVTLDIGLLVAGTKYRGEF 256
Query: 120 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 179
EERLKK+M+EI+Q+ +IL IDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTL
Sbjct: 257 EERLKKIMDEIRQAGNVILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTL 316
Query: 180 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 239
DEYRKHIE+D ALERRFQPV V EPSV+ETI+IL GLRERYE HHKL+ D AL +AA+L
Sbjct: 317 DEYRKHIERDAALERRFQPVMVGEPSVEETIEILYGLRERYEQHHKLKILDSALEAAAKL 376
Query: 240 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 299
S +YISDR+LPDKAIDL+DEAGSRVRL ++QLP A+EL+KELRQ+ KEK++AVR QDF+
Sbjct: 377 SDRYISDRYLPDKAIDLVDEAGSRVRLINSQLPPAAKELDKELRQVLKEKDDAVRSQDFD 436
Query: 300 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 359
+AGELRDREM++KA+I A+ + K + + D GPVV E DI IV++WTG+PV K+
Sbjct: 437 RAGELRDREMEIKAEIRAIA----QSKKTDERSDDPGPVVDEEDIAQIVASWTGVPVNKL 492
Query: 360 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 419
+ ES++LL ME+TLH+R+IGQ+EAVKA+SRAIRRARVGLKNPNRPIASFIFSGPTGVGK
Sbjct: 493 TESESEKLLHMEDTLHQRLIGQEEAVKAVSRAIRRARVGLKNPNRPIASFIFSGPTGVGK 552
Query: 420 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 479
+ELAK+LA+Y+FGSEEAMIRLDMSE+MERHTVSKLIGSPPGYVGY EGGQLTEAVRRRPY
Sbjct: 553 TELAKSLASYFFGSEEAMIRLDMSEYMERHTVSKLIGSPPGYVGYNEGGQLTEAVRRRPY 612
Query: 480 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 539
TVVLFDEIEKAHPDVFNM+LQILEDGRLTD+KGRTVDFKNTLLIMTSN+GS VIEKGG
Sbjct: 613 TVVLFDEIEKAHPDVFNMLLQILEDGRLTDAKGRTVDFKNTLLIMTSNIGSKVIEKGGGG 672
Query: 540 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 599
IGF+ ++ +S YNRI+SLV EELKQYFRPEFLNRLDE+IVFRQL + EVKEIADIMLK
Sbjct: 673 IGFEFSENQAESQYNRIRSLVNEELKQYFRPEFLNRLDEIIVFRQLNRDEVKEIADIMLK 732
Query: 600 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 659
EVF RL + I L+VTERF++R+VEEGYNP+YGARPLRRAIMRLLED +AE++L IK+
Sbjct: 733 EVFGRLNEQGITLEVTERFKDRLVEEGYNPAYGARPLRRAIMRLLEDVLAEQILGGHIKD 792
Query: 660 GDSVIVDVDSDGNVTVLNG 678
GD VDVD G V VL G
Sbjct: 793 GDIATVDVDDSGTVKVLPG 811
>gi|411117307|ref|ZP_11389794.1| ATPase with chaperone activity, ATP-binding subunit
[Oscillatoriales cyanobacterium JSC-12]
gi|410713410|gb|EKQ70911.1| ATPase with chaperone activity, ATP-binding subunit
[Oscillatoriales cyanobacterium JSC-12]
Length = 822
Score = 1032 bits (2668), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 511/681 (75%), Positives = 596/681 (87%), Gaps = 13/681 (1%)
Query: 1 MVGESTEAVGAGVGGGSSG-NKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 59
M+GE+ E GGS G K PTL+E+G+NLT+LA EGKLDPVVGRQ +IERV+QILG
Sbjct: 141 MLGETAEVTS----GGSQGRTKTPTLDEFGSNLTQLAAEGKLDPVVGRQKEIERVIQILG 196
Query: 60 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 119
RRTKNNP LIGEPGVGKTAIAEGLAQRIA+ DVPD +E K+V+TLD+GLLVAGTKYRGEF
Sbjct: 197 RRTKNNPVLIGEPGVGKTAIAEGLAQRIANDDVPDILEEKRVVTLDIGLLVAGTKYRGEF 256
Query: 120 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 179
EERLKK+M+EI+ + +IL IDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTL
Sbjct: 257 EERLKKIMDEIRSAGNVILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTL 316
Query: 180 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 239
DEYRKHIE+D ALERRFQPV V EP+VDETI+IL+GLRERYE HHKL+ +D AL +AA+L
Sbjct: 317 DEYRKHIERDAALERRFQPVMVGEPTVDETIEILRGLRERYEQHHKLKISDVALEAAAKL 376
Query: 240 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 299
S +YISDR+LPDKAIDLIDEAGSRVRL ++QLP A+EL+KELRQ+ KEK++AVR Q+F+
Sbjct: 377 SDRYISDRYLPDKAIDLIDEAGSRVRLINSQLPPAAKELDKELRQVLKEKDDAVRSQNFD 436
Query: 300 KAGELRDREMDLKAQISALV-DKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEK 358
+AG LRDREM++KA+I A+ +K E S ET PVVTE DI IV++WTG+PV K
Sbjct: 437 RAGALRDREMEIKAEIRAIAQNKKTESSSDET------PVVTEEDIAQIVASWTGVPVNK 490
Query: 359 VSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVG 418
++ ES++LL ME+TLH+R+IGQDEAV+A+SRAIRRARVGLKNPNRPIASFIFSGPTGVG
Sbjct: 491 LTESESEKLLHMEDTLHQRLIGQDEAVRAVSRAIRRARVGLKNPNRPIASFIFSGPTGVG 550
Query: 419 KSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRP 478
K+EL KALA+Y+FGSEEAMIRLDMSE+MERHTVSKLIGSPPGYVGY EGGQLTEAVRRRP
Sbjct: 551 KTELTKALASYFFGSEEAMIRLDMSEYMERHTVSKLIGSPPGYVGYNEGGQLTEAVRRRP 610
Query: 479 YTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR 538
YTVVLFDEIEKAHPDVFNM+LQILEDGRLTD+KGRTVDFKNTLLIMTSN+GS VIEKGG
Sbjct: 611 YTVVLFDEIEKAHPDVFNMLLQILEDGRLTDAKGRTVDFKNTLLIMTSNIGSKVIEKGGG 670
Query: 539 RIGFDLDY-DEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIM 597
+GFD +E++S YNRI+SLV EELKQYFRPEFLNR+DE+IVFRQL K EVKEIADIM
Sbjct: 671 GLGFDFTSENEEESQYNRIRSLVNEELKQYFRPEFLNRVDEIIVFRQLKKDEVKEIADIM 730
Query: 598 LKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREI 657
L EVF RL+ + I L+VTE+F++R+VEEGYNPSYGARPLRRAIMRLLEDS+AE++L+ +
Sbjct: 731 LNEVFGRLREQGIVLEVTEKFKDRLVEEGYNPSYGARPLRRAIMRLLEDSLAEEILSGRV 790
Query: 658 KEGDSVIVDVDSDGNVTVLNG 678
+GD+ +VDVD G V V G
Sbjct: 791 NDGDTAVVDVDESGQVVVRPG 811
>gi|282900556|ref|ZP_06308498.1| UvrB/UvrC protein [Cylindrospermopsis raciborskii CS-505]
gi|281194356|gb|EFA69311.1| UvrB/UvrC protein [Cylindrospermopsis raciborskii CS-505]
Length = 823
Score = 1031 bits (2666), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 509/688 (73%), Positives = 598/688 (86%), Gaps = 11/688 (1%)
Query: 1 MVGESTEAVGAGVGGGSSG-NKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 59
M+GE+ E GGSSG K PTL+E+G+NLT++A + KLDPVVGR +IERV+QILG
Sbjct: 141 MLGETAEVTP----GGSSGRTKTPTLDEFGSNLTQMAVDNKLDPVVGRAKEIERVIQILG 196
Query: 60 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 119
RRTKNNP LIGEPGVGKTAIAEGLA RIA+ DVPD +E K+V+TLD+GLLVAGTKYRGEF
Sbjct: 197 RRTKNNPVLIGEPGVGKTAIAEGLASRIANKDVPDILEDKRVVTLDIGLLVAGTKYRGEF 256
Query: 120 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 179
EERLKK+M+EI+Q+ +IL IDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTL
Sbjct: 257 EERLKKIMDEIRQAGNVILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTL 316
Query: 180 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 239
DEYRKHIE+D ALERRFQPV V EPSVDETI+IL GLR+RYE HHKL+ +DEALV+AA+L
Sbjct: 317 DEYRKHIERDAALERRFQPVMVGEPSVDETIEILYGLRDRYEAHHKLKISDEALVAAAKL 376
Query: 240 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 299
S +YISDR+LPDKAIDL+DEAGSRVRL ++QLP A+EL+KELRQI KEK++AVR QDF+
Sbjct: 377 SDRYISDRYLPDKAIDLVDEAGSRVRLINSQLPPAAKELDKELRQILKEKDDAVRSQDFD 436
Query: 300 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 359
+AGELRDREM++KA+I ++ + AE V PVVTE DI HIV++WTG+PV K+
Sbjct: 437 RAGELRDREMEIKAEIRSIAQNKANGTSAE----GVEPVVTEEDIAHIVASWTGVPVNKL 492
Query: 360 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 419
+ ES++LL ME+TLH+R+IGQ++AVKA+SRAIRRARVGLKNPNRPIASF+FSGPTGVGK
Sbjct: 493 TESESEKLLHMEDTLHQRLIGQEDAVKAVSRAIRRARVGLKNPNRPIASFVFSGPTGVGK 552
Query: 420 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 479
+ELAK+LA+Y+FGSEEAMIRLDMSE+MERHTVSKLIGSPPGYVGY EGGQLTEAVRRRPY
Sbjct: 553 TELAKSLASYFFGSEEAMIRLDMSEYMERHTVSKLIGSPPGYVGYNEGGQLTEAVRRRPY 612
Query: 480 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 539
TVVLFDEIEKAHPDVFNM+LQILEDGRLTD+KGRTVDFKNTLLI+TSN+GS VIEKGG
Sbjct: 613 TVVLFDEIEKAHPDVFNMLLQILEDGRLTDAKGRTVDFKNTLLILTSNIGSKVIEKGGSG 672
Query: 540 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 599
IGF+ D +S YNRI+SLV EELKQYFRPEFLNRLDE+IVFRQL K EV EIADIMLK
Sbjct: 673 IGFEFAEDAAESQYNRIRSLVNEELKQYFRPEFLNRLDEIIVFRQLNKAEVTEIADIMLK 732
Query: 600 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 659
EVF RL K I L+V++RF++R+++EGY+PSYGARPLRRAIMRLLEDS+AE++L+ IK+
Sbjct: 733 EVFGRLTEKGIALEVSDRFKDRLIQEGYSPSYGARPLRRAIMRLLEDSLAEEILSGRIKD 792
Query: 660 GDSVIVDVDSDGNVTVLNGSSGAPESLA 687
GD VD+D +G V V + PE LA
Sbjct: 793 GDIAYVDIDENGVVQVT--ARQRPELLA 818
>gi|282896301|ref|ZP_06304323.1| UvrB/UvrC protein [Raphidiopsis brookii D9]
gi|281198797|gb|EFA73676.1| UvrB/UvrC protein [Raphidiopsis brookii D9]
Length = 823
Score = 1031 bits (2665), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 505/676 (74%), Positives = 593/676 (87%), Gaps = 9/676 (1%)
Query: 1 MVGESTEAVGAGVGGGSSG-NKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 59
M+GE+ E GGSSG K PTL+E+G+NLT++A + KLDPVVGR +IERV+QILG
Sbjct: 141 MLGETAEVTP----GGSSGRTKTPTLDEFGSNLTQMAVDNKLDPVVGRAKEIERVIQILG 196
Query: 60 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 119
RRTKNNP LIGEPGVGKTAIAEGLA RIA+ DVPD +E K+V+TLD+GLLVAGTKYRGEF
Sbjct: 197 RRTKNNPVLIGEPGVGKTAIAEGLASRIANKDVPDILEDKRVVTLDIGLLVAGTKYRGEF 256
Query: 120 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 179
EERLKK+M+EI+Q+ +IL IDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTL
Sbjct: 257 EERLKKIMDEIRQAGNVILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTL 316
Query: 180 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 239
DEYRKHIE+D ALERRFQPV V EPSVDETI+IL GLR+RYE HHKL+ +DEALV+AA+L
Sbjct: 317 DEYRKHIERDAALERRFQPVMVGEPSVDETIEILYGLRDRYEAHHKLKISDEALVAAAKL 376
Query: 240 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 299
S +YISDR+LPDKAIDL+DEAGSRVRL ++QLP A+EL+KELRQI KEK++AVR QDF+
Sbjct: 377 SDRYISDRYLPDKAIDLVDEAGSRVRLINSQLPPAAKELDKELRQILKEKDDAVRSQDFD 436
Query: 300 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 359
+AGELRDREM++KA+I ++ + AE V PVVTE DI HIV++WTG+PV K+
Sbjct: 437 RAGELRDREMEIKAEIRSIAQNKANGTSAE----GVEPVVTEEDIAHIVASWTGVPVNKL 492
Query: 360 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 419
+ ES++LL ME+TLH+R+IGQ++AVKA+SRAIRRARVGLKNPNRPIASF+FSGPTGVGK
Sbjct: 493 TESESEKLLHMEDTLHQRLIGQEDAVKAVSRAIRRARVGLKNPNRPIASFVFSGPTGVGK 552
Query: 420 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 479
+ELAK+LA+Y+FGSEEAMIRLDMSE+MERHTVSKLIGSPPGYVGY EGGQLTEAVRRRPY
Sbjct: 553 TELAKSLASYFFGSEEAMIRLDMSEYMERHTVSKLIGSPPGYVGYNEGGQLTEAVRRRPY 612
Query: 480 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 539
TVVLFDEIEKAHPDVFNM+LQILEDGRLTD+KGRTVDFKNTLLI+TSN+GS VIEKGG
Sbjct: 613 TVVLFDEIEKAHPDVFNMLLQILEDGRLTDAKGRTVDFKNTLLILTSNIGSKVIEKGGSG 672
Query: 540 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 599
IGF+ D +S YNRI+SLV EELKQYFRPEFLNRLDE+IVFRQL K EV EIADIMLK
Sbjct: 673 IGFEFAEDAAESQYNRIRSLVNEELKQYFRPEFLNRLDEIIVFRQLNKAEVTEIADIMLK 732
Query: 600 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 659
EVF RL K I L+V++RF++R+++EGY+PSYGARPLRRAIMRLLEDS+AE++L+ IK+
Sbjct: 733 EVFGRLTEKGIALEVSDRFKDRLIQEGYSPSYGARPLRRAIMRLLEDSLAEEILSGRIKD 792
Query: 660 GDSVIVDVDSDGNVTV 675
GD VD+D +G V V
Sbjct: 793 GDIAYVDIDENGVVQV 808
>gi|434396958|ref|YP_007130962.1| ATPase AAA-2 domain protein [Stanieria cyanosphaera PCC 7437]
gi|428268055|gb|AFZ33996.1| ATPase AAA-2 domain protein [Stanieria cyanosphaera PCC 7437]
Length = 822
Score = 1030 bits (2663), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 499/677 (73%), Positives = 594/677 (87%), Gaps = 8/677 (1%)
Query: 1 MVGESTEAVGAGVGGGSSG-NKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 59
M+GE+ E G G+ G NK PTL+E+G+NLT++A EGKLDPVVGRQ +IERV+QILG
Sbjct: 141 MLGETAEVAA---GSGTQGRNKTPTLDEFGSNLTQMASEGKLDPVVGRQKEIERVIQILG 197
Query: 60 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 119
RRTKNNP LIGEPGVGKTAIAEGLAQRIA+ DVPD +E K+V+TLD+GLLVAGTKYRGEF
Sbjct: 198 RRTKNNPVLIGEPGVGKTAIAEGLAQRIANKDVPDILEDKRVVTLDIGLLVAGTKYRGEF 257
Query: 120 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 179
EERLKK+M+EI+Q+ +IL IDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTL
Sbjct: 258 EERLKKIMDEIRQAGNVILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTL 317
Query: 180 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 239
DEYRKHIE+D ALERRFQPV V EP+VDETI+IL GLRERYE HHKL+ DEAL +AA+L
Sbjct: 318 DEYRKHIERDAALERRFQPVMVGEPTVDETIEILYGLRERYEQHHKLKILDEALEAAAKL 377
Query: 240 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 299
S +YISDR+LPDKAIDLIDEAGSRVRL ++QLP A+EL+KELR++ K+K++AVR QDF+
Sbjct: 378 SDRYISDRYLPDKAIDLIDEAGSRVRLINSQLPPAAKELDKELREVLKQKDDAVRAQDFD 437
Query: 300 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 359
+AGELRDREM++K +I ++ K E + GD PVV +I HIV++WTG+PV K+
Sbjct: 438 RAGELRDREMEIKEEIRSIASN----KKTEEDGGDDSPVVDAEEIAHIVASWTGVPVNKI 493
Query: 360 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 419
+ ES++LL ME+TLH+R+IGQ++AVKAISRAIRRARVGLKNPNRPIASF+FSGPTGVGK
Sbjct: 494 TESESEKLLHMEDTLHQRIIGQEDAVKAISRAIRRARVGLKNPNRPIASFVFSGPTGVGK 553
Query: 420 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 479
+EL KALA Y+FGSEEAMIRLDMSE+MERHTVSKLIGSPPGYVGY EGGQLTEAVRRRPY
Sbjct: 554 TELTKALATYFFGSEEAMIRLDMSEYMERHTVSKLIGSPPGYVGYNEGGQLTEAVRRRPY 613
Query: 480 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 539
TVVLFDEIEKAHPD+FNM+LQILEDGRLTD+KGRTVDFKNTL+I+TSN+GS VIEKGG
Sbjct: 614 TVVLFDEIEKAHPDIFNMLLQILEDGRLTDAKGRTVDFKNTLIILTSNIGSKVIEKGGGG 673
Query: 540 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 599
+GF+ D+ +S YNRI+SLV EELK YFRPEFLNRLDE+IVFRQL+K EVKEI++++LK
Sbjct: 674 LGFEFADDQAESQYNRIRSLVNEELKNYFRPEFLNRLDEIIVFRQLSKDEVKEISELLLK 733
Query: 600 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 659
EVF RL +DI L+VTE+F+ER+VEEGYNPSYGARPLRRAIMRLLED +AE++L+ + E
Sbjct: 734 EVFTRLTEQDITLEVTEKFKERLVEEGYNPSYGARPLRRAIMRLLEDVLAEEILSGRLGE 793
Query: 660 GDSVIVDVDSDGNVTVL 676
GD+ VD+DS+G V ++
Sbjct: 794 GDTAQVDIDSEGKVKII 810
>gi|414079261|ref|YP_007000685.1| ATP-dependent Clp family protein [Anabaena sp. 90]
gi|413972540|gb|AFW96628.1| ATP-dependent Clp family protein [Anabaena sp. 90]
Length = 838
Score = 1030 bits (2662), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 503/676 (74%), Positives = 594/676 (87%), Gaps = 9/676 (1%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
M+GE+ E GG S K PTL+E+G+NLT++A + KLDPVVGR +IERV+QILGR
Sbjct: 157 MLGETAEVTP---GGPSGRTKTPTLDEFGSNLTQMAIDNKLDPVVGRAKEIERVIQILGR 213
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNP LIGEPGVGKTAIAEGLA RIAS D+PD +E K+V+TLD+GLLVAGTKYRGEFE
Sbjct: 214 RTKNNPVLIGEPGVGKTAIAEGLASRIASKDIPDILEDKRVVTLDIGLLVAGTKYRGEFE 273
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
ERLKK+M+EI+ + +IL IDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTLD
Sbjct: 274 ERLKKIMDEIRSAGNVILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLD 333
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRKHIE+D ALERRFQPV V EPSVDETI+IL GLR+RYE HHKL+ +DEALV+AA+LS
Sbjct: 334 EYRKHIERDAALERRFQPVMVGEPSVDETIEILYGLRDRYEAHHKLKISDEALVAAAKLS 393
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
+YISDRFLPDKAIDL+DEAGSRVRL ++QLP A+EL+KELRQI KEK++AVR QDF++
Sbjct: 394 DRYISDRFLPDKAIDLMDEAGSRVRLINSQLPPAAKELDKELRQILKEKDDAVRSQDFDR 453
Query: 301 AGELRDREMDLKAQISALVDKGKEMSKAETEAGD-VGPVVTEVDIQHIVSAWTGIPVEKV 359
AGELRDREM++KA+I + +K+ +GD V PVVTE DI HIV++WTG+PV K+
Sbjct: 454 AGELRDREMEIKAEIRTIAQ-----TKSNGASGDGVEPVVTEEDIAHIVASWTGVPVNKL 508
Query: 360 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 419
+ ES++LL ME+TLH+R+IGQ++AVKA+SRAIRRARVGLKNPNRPIASF+FSGPTGVGK
Sbjct: 509 TESESEKLLHMEDTLHQRLIGQEDAVKAVSRAIRRARVGLKNPNRPIASFVFSGPTGVGK 568
Query: 420 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 479
+ELAK+LA+Y+FG+EEAMIRLDMSE+MERHTVSKLIGSPPGYVGY EGGQLTEAVRRRPY
Sbjct: 569 TELAKSLASYFFGAEEAMIRLDMSEYMERHTVSKLIGSPPGYVGYNEGGQLTEAVRRRPY 628
Query: 480 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 539
TVVLFDEIEKAHPDVFNM+LQILEDGRLTD+KGRTVDFKNTLLI+TSN+GS VIEKGG
Sbjct: 629 TVVLFDEIEKAHPDVFNMLLQILEDGRLTDAKGRTVDFKNTLLILTSNIGSKVIEKGGSG 688
Query: 540 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 599
IGF+ D ++ YNRI+SLV EELKQYFRPEFLNRLDE+IVFRQL KLEV +IA+IMLK
Sbjct: 689 IGFEFSEDATETQYNRIRSLVNEELKQYFRPEFLNRLDEIIVFRQLNKLEVTQIAEIMLK 748
Query: 600 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 659
EVF RL K I L+VT+RF++R++ EGY+PSYGARPLRRAIMRLLEDS+AE++L+ IK+
Sbjct: 749 EVFGRLTEKGIVLEVTDRFKDRLITEGYSPSYGARPLRRAIMRLLEDSLAEEILSGRIKD 808
Query: 660 GDSVIVDVDSDGNVTV 675
GD+ +VDVD +G V V
Sbjct: 809 GDTALVDVDENGIVQV 824
>gi|16331384|ref|NP_442112.1| ATP-dependent Clp protease regulatory subunit [Synechocystis sp.
PCC 6803]
gi|383323125|ref|YP_005383978.1| ATP-dependent Clp protease regulatory subunit [Synechocystis sp.
PCC 6803 substr. GT-I]
gi|383326294|ref|YP_005387147.1| ATP-dependent Clp protease regulatory subunit [Synechocystis sp.
PCC 6803 substr. PCC-P]
gi|383492178|ref|YP_005409854.1| ATP-dependent Clp protease regulatory subunit [Synechocystis sp.
PCC 6803 substr. PCC-N]
gi|384437446|ref|YP_005652170.1| ATP-dependent Clp protease regulatory subunit [Synechocystis sp.
PCC 6803]
gi|451815537|ref|YP_007451989.1| ATP-dependent Clp protease regulatory subunit [Synechocystis sp.
PCC 6803]
gi|1001555|dbj|BAA10182.1| ATP-dependent Clp protease regulatory subunit [Synechocystis sp.
PCC 6803]
gi|339274478|dbj|BAK50965.1| ATP-dependent Clp protease regulatory subunit [Synechocystis sp.
PCC 6803]
gi|359272444|dbj|BAL29963.1| ATP-dependent Clp protease regulatory subunit [Synechocystis sp.
PCC 6803 substr. GT-I]
gi|359275614|dbj|BAL33132.1| ATP-dependent Clp protease regulatory subunit [Synechocystis sp.
PCC 6803 substr. PCC-N]
gi|359278784|dbj|BAL36301.1| ATP-dependent Clp protease regulatory subunit [Synechocystis sp.
PCC 6803 substr. PCC-P]
gi|407961235|dbj|BAM54475.1| ATP-dependent Clp protease regulatory subunit [Synechocystis sp.
PCC 6803]
gi|451781506|gb|AGF52475.1| ATP-dependent Clp protease regulatory subunit [Synechocystis sp.
PCC 6803]
Length = 821
Score = 1029 bits (2661), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 507/681 (74%), Positives = 593/681 (87%), Gaps = 10/681 (1%)
Query: 1 MVGESTEAVGAGVGGGSSG-NKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 59
M+GE+ E GGGS G K PTL+E+G+NLT++A EGKLDPVVGRQ +IERV+QILG
Sbjct: 141 MLGETAEVAA---GGGSGGRTKTPTLDEFGSNLTQMAAEGKLDPVVGRQKEIERVIQILG 197
Query: 60 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 119
RRTKNNP LIGEPGVGKTAIAEGLAQRIA+ D+PD +E K+V+TLD+GLLVAGTKYRGEF
Sbjct: 198 RRTKNNPVLIGEPGVGKTAIAEGLAQRIANKDIPDILEEKRVVTLDIGLLVAGTKYRGEF 257
Query: 120 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 179
EERLKK+M+EI+Q+ IIL IDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTL
Sbjct: 258 EERLKKIMDEIRQAGNIILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTL 317
Query: 180 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 239
DEYRKHIE+D ALERRFQPV V EPSV+ETI+IL GLRERYE HHKL+ DEAL +AA+L
Sbjct: 318 DEYRKHIERDAALERRFQPVMVGEPSVEETIEILYGLRERYEQHHKLKILDEALEAAAKL 377
Query: 240 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 299
S +YISDRFLPDKAIDLIDEAGSRVRL ++QLP A+EL+KELRQI KEK++AVR QDFE
Sbjct: 378 SDRYISDRFLPDKAIDLIDEAGSRVRLINSQLPPAAKELDKELRQILKEKDDAVRNQDFE 437
Query: 300 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 359
+AGEL+DRE ++K QI A+ KAE + G+ P VT +I HIV++WTG+PV K+
Sbjct: 438 QAGELKDREDEIKKQIRAIASS----KKAEGDNGE--PEVTSEEIAHIVASWTGVPVNKL 491
Query: 360 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 419
+ ES++LL ME+TLH+R+IGQ++AVKA+SRAIRRARVGLKNPNRPIASFIFSGPTGVGK
Sbjct: 492 TESESEKLLHMEDTLHQRLIGQEDAVKAVSRAIRRARVGLKNPNRPIASFIFSGPTGVGK 551
Query: 420 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 479
+EL KALAAY+FGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGY EGGQLTEAVRRRPY
Sbjct: 552 TELTKALAAYFFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYNEGGQLTEAVRRRPY 611
Query: 480 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 539
TVVLFDEIEKAHPD+FNM+LQILEDGRLTD+KGRTVDFKNTLLIMTSN+GS VIEKGG
Sbjct: 612 TVVLFDEIEKAHPDIFNMLLQILEDGRLTDAKGRTVDFKNTLLIMTSNIGSKVIEKGGGG 671
Query: 540 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 599
+GFD D+ +S YNRI+SLV EELK YFRPEFLNRLDE+IVFRQL K EVKEI++I+L+
Sbjct: 672 LGFDFADDQAESQYNRIRSLVNEELKNYFRPEFLNRLDEIIVFRQLNKEEVKEISEILLR 731
Query: 600 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 659
+VF RL K+I LQVT++F+ER+VEEG+NP+YGARPLRRAIMRLLED +AE++L+ +KE
Sbjct: 732 DVFARLVEKEISLQVTDKFKERIVEEGFNPAYGARPLRRAIMRLLEDVLAEEILSGRLKE 791
Query: 660 GDSVIVDVDSDGNVTVLNGSS 680
G +VD+ D V V+ G +
Sbjct: 792 GSQALVDIGEDNQVVVIPGET 812
>gi|157413559|ref|YP_001484425.1| ClpC [Prochlorococcus marinus str. MIT 9215]
gi|157388134|gb|ABV50839.1| ClpC [Prochlorococcus marinus str. MIT 9215]
Length = 842
Score = 1029 bits (2660), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 507/699 (72%), Positives = 603/699 (86%), Gaps = 13/699 (1%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
M+GE+ E VG G S K TL+E+GTNLTKLA E KLDPVVGR +I+RVVQILGR
Sbjct: 141 MLGETAE-VGTGGSTAKSNLKTATLDEFGTNLTKLASESKLDPVVGRHSEIDRVVQILGR 199
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNP LIGEPGVGKTAIAEGLAQRI +GD+PD +E K+V+TLD+GLLVAGTKYRGEFE
Sbjct: 200 RTKNNPVLIGEPGVGKTAIAEGLAQRIQTGDIPDILEDKRVLTLDIGLLVAGTKYRGEFE 259
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
ERLKK+MEEIK + +IL IDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTLD
Sbjct: 260 ERLKKIMEEIKSAGNVILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLD 319
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRKHIE+D ALERRFQPV V EPS+++TI+ILKGLRERYE HH+L+ TD+AL +AA L
Sbjct: 320 EYRKHIERDAALERRFQPVMVGEPSIEDTIEILKGLRERYEQHHRLKITDDALEAAAHLG 379
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
+YISDRFLPDKAIDLIDEAGSRVRL +++LP EA+E+++ELRQ+ K+K E+VR Q+F++
Sbjct: 380 DRYISDRFLPDKAIDLIDEAGSRVRLINSKLPPEAKEIDRELRQVQKQKEESVRDQNFDQ 439
Query: 301 AGELRDREMDLKAQISALVDKGKEM-----SKAETEA--GDV----GPVVTEVDIQHIVS 349
AG+LR++EM+L A+I +++ KE S A+ E+ GD P+V+E D+ HIV+
Sbjct: 440 AGQLREKEMELSAKIKEVLENKKESTVGDKSNADNESVKGDSTLLQSPLVSEEDVAHIVA 499
Query: 350 AWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASF 409
+WTG+PV+K++ ES +LL MEETLH+R+IGQDEAVKA+SRAIRRARVGLKNPNRPIASF
Sbjct: 500 SWTGVPVQKLTETESVKLLNMEETLHQRLIGQDEAVKAVSRAIRRARVGLKNPNRPIASF 559
Query: 410 IFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQ 469
IFSGPTGVGK+EL K+LA+Y+FGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVG+ EGGQ
Sbjct: 560 IFSGPTGVGKTELTKSLASYFFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGFNEGGQ 619
Query: 470 LTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVG 529
LTEAVRRRPYTVVLFDE+EKAHPDVFN++LQ+LEDGRLTDSKGRTVDFKNTLLIMTSN+G
Sbjct: 620 LTEAVRRRPYTVVLFDEVEKAHPDVFNLLLQLLEDGRLTDSKGRTVDFKNTLLIMTSNIG 679
Query: 530 SSVIEKGGRRIGFDLDYDE-KDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKL 588
S VIEKGG +GF+ D +DS YNRIKSLV EELKQYFRPEFLNRLDE+IVFRQLTK
Sbjct: 680 SKVIEKGGGGLGFEFSGDSVEDSQYNRIKSLVNEELKQYFRPEFLNRLDEIIVFRQLTKN 739
Query: 589 EVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSM 648
EVKEIA+IML+EVF RL+ K I+L VT+ F+ER+VEEGYNPSYGARPLRRA+MRLLEDS+
Sbjct: 740 EVKEIAEIMLQEVFARLQDKGIKLNVTDAFKERLVEEGYNPSYGARPLRRAVMRLLEDSL 799
Query: 649 AEKMLAREIKEGDSVIVDVDSDGNVTVLNGSSGAPESLA 687
AE++L+ IK+GD+ +VD+D + VT+ S + + LA
Sbjct: 800 AEEVLSGRIKDGDNALVDIDDNKKVTINISSEESSQELA 838
>gi|443476197|ref|ZP_21066115.1| ATPase AAA-2 domain protein [Pseudanabaena biceps PCC 7429]
gi|443018866|gb|ELS33048.1| ATPase AAA-2 domain protein [Pseudanabaena biceps PCC 7429]
Length = 829
Score = 1028 bits (2658), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 516/693 (74%), Positives = 597/693 (86%), Gaps = 14/693 (2%)
Query: 1 MVGESTEAVGAGVGGGSSG-NKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 59
M+GE+ E GGGSSG K PTL+E+G+NLT+LA++GKLDPVVGR+ +IERV+QILG
Sbjct: 141 MLGETAEV---SAGGGSSGRTKTPTLDEFGSNLTQLAQDGKLDPVVGREKEIERVIQILG 197
Query: 60 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 119
RRTKNNP LIGEPGVGKTAIAEGLAQRI++ D+PD ++ K+V+TLD+GLLVAGTKYRGEF
Sbjct: 198 RRTKNNPVLIGEPGVGKTAIAEGLAQRISNSDIPDILQEKRVVTLDIGLLVAGTKYRGEF 257
Query: 120 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 179
EERLKK+MEEI+ + +IL IDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTL
Sbjct: 258 EERLKKIMEEIRTAGNVILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTL 317
Query: 180 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 239
DEYRKHIE+D ALERRFQPV V EPSV+ETI+IL GLR+RYE HHKL+ DEALV+AA+L
Sbjct: 318 DEYRKHIERDAALERRFQPVMVGEPSVEETIEILIGLRQRYEEHHKLKIDDEALVAAAKL 377
Query: 240 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 299
S +YISDRFLPDKAIDLIDEAGSRVRL ++QLP A+EL+KELR KEK++AVR QDF+
Sbjct: 378 SDRYISDRFLPDKAIDLIDEAGSRVRLINSQLPPAAKELDKELRLTLKEKDDAVRKQDFD 437
Query: 300 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPV-VTEVDIQHIVSAWTGIPVEK 358
KA ELRD+E+DLK QI AL + KAE D + VTE DI +IVS+WTG+PV K
Sbjct: 438 KAAELRDKEIDLKQQIRAL----SQTKKAEAPTEDAPEIRVTEEDIAYIVSSWTGVPVLK 493
Query: 359 VSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVG 418
++ ES +L++MEETLH RVIGQDEAVKAISRAIRRARVGLK+PNRPIASFIFSGPTGVG
Sbjct: 494 ITESESVKLMQMEETLHSRVIGQDEAVKAISRAIRRARVGLKSPNRPIASFIFSGPTGVG 553
Query: 419 KSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRP 478
K+EL KALA+Y+FGSE+AMIRLDMSE+MERHTVSKLIGSPPGYVGY EGGQLTEAVRRRP
Sbjct: 554 KTELTKALASYFFGSEDAMIRLDMSEYMERHTVSKLIGSPPGYVGYNEGGQLTEAVRRRP 613
Query: 479 YTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR 538
YTVVLFDEIEKAHPDVFN++LQ+LEDGRLTDSKGRTVDFKNTLLIMTSNVGS VIEKGG
Sbjct: 614 YTVVLFDEIEKAHPDVFNLLLQVLEDGRLTDSKGRTVDFKNTLLIMTSNVGSKVIEKGGG 673
Query: 539 RIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIML 598
+GFD ++D+ Y RI+SLV EELKQYFRPEFLNRLDE+IVFRQLTK EVKEIAD+ML
Sbjct: 674 GLGFDFAASQEDALYTRIRSLVNEELKQYFRPEFLNRLDEIIVFRQLTKPEVKEIADLML 733
Query: 599 KEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIK 658
E F R+ K+I L VTERF++ +V+EGYNPSYGARPLRRAIMRLLEDS+AE++L +++
Sbjct: 734 NEFFKRMLDKNIVLTVTERFKDLLVQEGYNPSYGARPLRRAIMRLLEDSLAEEILTGKVR 793
Query: 659 EGDSVIVDVDSDGNVTV-----LNGSSGAPESL 686
EG SV VDVD DG V V LNGS + + L
Sbjct: 794 EGASVQVDVDDDGKVKVIEKEALNGSENSLQLL 826
>gi|422303962|ref|ZP_16391311.1| ATP-dependent Clp protease ATP-binding subunit clpA homolog
[Microcystis aeruginosa PCC 9806]
gi|389791002|emb|CCI13172.1| ATP-dependent Clp protease ATP-binding subunit clpA homolog
[Microcystis aeruginosa PCC 9806]
Length = 821
Score = 1028 bits (2657), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 502/679 (73%), Positives = 593/679 (87%), Gaps = 10/679 (1%)
Query: 1 MVGESTEAVGAGVGGGSSG-NKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 59
M+GE+ E G S G K PTL+E+G+NLT++A EGKLDPVVGRQ +IERV+QILG
Sbjct: 141 MLGETAEVAA---GSSSQGRTKTPTLDEFGSNLTQMASEGKLDPVVGRQKEIERVIQILG 197
Query: 60 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 119
RRTKNNP LIGEPGVGKTAIAEGLAQRIA+ D+PD +E K+V+TLD+GLLVAGTKYRGEF
Sbjct: 198 RRTKNNPVLIGEPGVGKTAIAEGLAQRIANKDIPDILEEKRVVTLDIGLLVAGTKYRGEF 257
Query: 120 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 179
EERLKK+M+EI+Q+ +IL IDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTL
Sbjct: 258 EERLKKIMDEIRQAGNVILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTL 317
Query: 180 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 239
DEYRKHIE+D ALERRFQPV V EPSV+ETI+IL GLRERYE HHKL+ DEAL +AA+L
Sbjct: 318 DEYRKHIERDAALERRFQPVMVGEPSVEETIEILYGLRERYEQHHKLKILDEALEAAAKL 377
Query: 240 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 299
S +YISDRFLPDKAIDLIDEAGSRVRL ++QLP A+EL+KELRQI K+K++AVRGQDFE
Sbjct: 378 SDRYISDRFLPDKAIDLIDEAGSRVRLINSQLPPAAKELDKELRQILKQKDDAVRGQDFE 437
Query: 300 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 359
KAGELRDREM++K QI L S + E G+ P V +I HIV++WTG+PV K+
Sbjct: 438 KAGELRDREMEIKTQIRNLA------STKKGEDGNDEPFVDAEEIAHIVASWTGVPVNKL 491
Query: 360 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 419
+ ES++LL ME+TLH+R+IGQ++AVKA+SRAIRRARVGLKNPNRPIASFIFSGPTGVGK
Sbjct: 492 TETESEKLLHMEDTLHQRLIGQEDAVKAVSRAIRRARVGLKNPNRPIASFIFSGPTGVGK 551
Query: 420 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 479
+EL KALAAY+FGSE+AMIRLDMSE+MERHTVSKLIGSPPGYVGY EGGQLTEAVRRRPY
Sbjct: 552 TELTKALAAYFFGSEDAMIRLDMSEYMERHTVSKLIGSPPGYVGYNEGGQLTEAVRRRPY 611
Query: 480 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 539
TVVLFDEIEKAHPDVFNM+LQILEDGRLTD+KGRTVDFKNTLLIMTSN+GS VIEKGG
Sbjct: 612 TVVLFDEIEKAHPDVFNMLLQILEDGRLTDAKGRTVDFKNTLLIMTSNIGSKVIEKGGGG 671
Query: 540 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 599
+GF+ ++ ++ YNRI+SLV EELKQYFRPEFLNRLDE+IVFRQL K EVKEIA+I+LK
Sbjct: 672 LGFEFADNQAEAQYNRIRSLVNEELKQYFRPEFLNRLDEIIVFRQLNKEEVKEIAEILLK 731
Query: 600 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 659
+VF RL ++I L VT++F+ER++EEGYNP+YGARPLRRAIMRLLED +AE++L+ + +
Sbjct: 732 DVFKRLTEQNITLSVTDKFKERLIEEGYNPAYGARPLRRAIMRLLEDVLAEEILSGRVSD 791
Query: 660 GDSVIVDVDSDGNVTVLNG 678
GD+ +VD+D +G V V++G
Sbjct: 792 GDTAMVDIDEEGKVKVISG 810
>gi|428301853|ref|YP_007140159.1| ATPase [Calothrix sp. PCC 6303]
gi|428238397|gb|AFZ04187.1| ATPase AAA-2 domain protein [Calothrix sp. PCC 6303]
Length = 823
Score = 1027 bits (2656), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 503/678 (74%), Positives = 590/678 (87%), Gaps = 7/678 (1%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
M+GE+ E GG SS K PTL+E+G+NLT++A +GKLDPVVGR +IERV+QILGR
Sbjct: 141 MLGETAEVTQ---GGPSSRTKTPTLDEFGSNLTQMAIDGKLDPVVGRAKEIERVIQILGR 197
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNP LIGEPGVGKTAIAEGLA RI++ D+PD +E K+V+TLD+GLLVAGTKYRGEFE
Sbjct: 198 RTKNNPVLIGEPGVGKTAIAEGLATRISTKDIPDILEDKRVVTLDIGLLVAGTKYRGEFE 257
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
ERLKK+M+EI+Q+ +IL IDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTLD
Sbjct: 258 ERLKKIMDEIRQAGNVILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLD 317
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRKHIE+D ALERRFQPV V EPSVDETI+IL GLR+RYE HHKL+ +DEALV+AA+LS
Sbjct: 318 EYRKHIERDAALERRFQPVMVGEPSVDETIEILYGLRDRYEQHHKLKISDEALVAAAKLS 377
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
+YISDRFLPDKAIDL+DEAGSRVRL ++QLP A+EL+KELRQI KEK++AVR QDF++
Sbjct: 378 DRYISDRFLPDKAIDLVDEAGSRVRLINSQLPPAAKELDKELRQILKEKDDAVRSQDFDR 437
Query: 301 AGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVS 360
AGELRDREM++KA+I + E E PVVTE DI HIV++WTG+PV K++
Sbjct: 438 AGELRDREMEIKAEIRTIAQNKTNAKGNEGEE----PVVTEEDIAHIVASWTGVPVNKLT 493
Query: 361 TDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 420
ES++LL ME+TLH+R+IGQ++AVKA+SRAIRRARVGLKNPNRPIASFIFSGPTGVGK+
Sbjct: 494 ESESEKLLHMEDTLHQRLIGQEDAVKAVSRAIRRARVGLKNPNRPIASFIFSGPTGVGKT 553
Query: 421 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 480
ELAK+LA+Y+FGSEEAMIRLDMSE+MERHTVSKLIGSPPGYVGY EGGQLTEAVRRRPYT
Sbjct: 554 ELAKSLASYFFGSEEAMIRLDMSEYMERHTVSKLIGSPPGYVGYNEGGQLTEAVRRRPYT 613
Query: 481 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI 540
VVLFDEIEKAHPDVFNM+LQILEDGRLTD+KGRTVDFKNTLLI+TSN+GS VIEKGG I
Sbjct: 614 VVLFDEIEKAHPDVFNMLLQILEDGRLTDAKGRTVDFKNTLLILTSNIGSKVIEKGGGGI 673
Query: 541 GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 600
GF+ D+ DS YNRIK LV EELK YFRPEFLNRLDE+IVFRQL K EV EIADIMLKE
Sbjct: 674 GFEFAEDQTDSQYNRIKFLVNEELKNYFRPEFLNRLDEIIVFRQLNKAEVTEIADIMLKE 733
Query: 601 VFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEG 660
VF RL K I L+V++ F++R+++EGY+PSYGARPLRRAIMRLLEDS+AE++L+ +K+G
Sbjct: 734 VFGRLTEKGITLEVSDSFKDRLIQEGYSPSYGARPLRRAIMRLLEDSLAEEILSGRVKDG 793
Query: 661 DSVIVDVDSDGNVTVLNG 678
D +VD+D +G V V G
Sbjct: 794 DIAVVDIDENGAVIVRPG 811
>gi|166368696|ref|YP_001660969.1| ATP-dependent Clp protease ATPase subunit [Microcystis aeruginosa
NIES-843]
gi|425465251|ref|ZP_18844561.1| ATP-dependent Clp protease ATP-binding subunit clpA homolog
[Microcystis aeruginosa PCC 9809]
gi|166091069|dbj|BAG05777.1| ATP-dependent Clp protease ATPase subunit [Microcystis aeruginosa
NIES-843]
gi|389832560|emb|CCI23740.1| ATP-dependent Clp protease ATP-binding subunit clpA homolog
[Microcystis aeruginosa PCC 9809]
Length = 821
Score = 1027 bits (2655), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 501/679 (73%), Positives = 593/679 (87%), Gaps = 10/679 (1%)
Query: 1 MVGESTEAVGAGVGGGSSG-NKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 59
M+GE+ E G S G K PTL+E+G+NLT++A EGKLDPVVGRQ +IERV+QILG
Sbjct: 141 MLGETAEVAA---GSSSQGRTKTPTLDEFGSNLTQMASEGKLDPVVGRQKEIERVIQILG 197
Query: 60 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 119
RRTKNNP LIGEPGVGKTAIAEGLAQRIA+ D+PD +E K+V+TLD+GLLVAGTKYRGEF
Sbjct: 198 RRTKNNPVLIGEPGVGKTAIAEGLAQRIANKDIPDILEEKRVVTLDIGLLVAGTKYRGEF 257
Query: 120 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 179
EERLKK+M+EI+Q+ ++L IDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTL
Sbjct: 258 EERLKKIMDEIRQAGNVVLVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTL 317
Query: 180 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 239
DEYRKHIE+D ALERRFQPV V EPSV+ETI+IL GLRERYE HHKL+ DEAL +AA+L
Sbjct: 318 DEYRKHIERDAALERRFQPVMVGEPSVEETIEILYGLRERYEQHHKLKILDEALEAAAKL 377
Query: 240 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 299
S +YISDRFLPDKAIDLIDEAGSRVRL ++QLP A+EL+KELRQI K+K++AVRGQDFE
Sbjct: 378 SDRYISDRFLPDKAIDLIDEAGSRVRLINSQLPPAAKELDKELRQILKQKDDAVRGQDFE 437
Query: 300 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 359
KAGELRDREM++K QI L S + E G+ P V +I HIV++WTG+PV K+
Sbjct: 438 KAGELRDREMEIKTQIRNLA------STKKGEDGNDEPFVDAEEIAHIVASWTGVPVNKL 491
Query: 360 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 419
+ ES++LL ME+TLH+R+IGQ++AVKA+SRAIRRARVGLKNPNRPIASFIFSGPTGVGK
Sbjct: 492 TETESEKLLHMEDTLHQRLIGQEDAVKAVSRAIRRARVGLKNPNRPIASFIFSGPTGVGK 551
Query: 420 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 479
+EL KALAAY+FGSE+AMIRLDMSE+MERHTVSKLIGSPPGYVGY EGGQLTEAVRRRPY
Sbjct: 552 TELTKALAAYFFGSEDAMIRLDMSEYMERHTVSKLIGSPPGYVGYNEGGQLTEAVRRRPY 611
Query: 480 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 539
TVVLFDEIEKAHPDVFNM+LQILEDGRLTD+KGRTVDFKNTLLIMTSN+GS VIEKGG
Sbjct: 612 TVVLFDEIEKAHPDVFNMLLQILEDGRLTDAKGRTVDFKNTLLIMTSNIGSKVIEKGGGG 671
Query: 540 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 599
+GF+ ++ ++ YNRI+SLV EELKQYFRPEFLNRLDE+IVFRQL K EVKEIA+I+LK
Sbjct: 672 LGFEFADNQAEAQYNRIRSLVNEELKQYFRPEFLNRLDEIIVFRQLNKEEVKEIAEILLK 731
Query: 600 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 659
+VF RL ++I L VT++F+ER++EEGYNP+YGARPLRRAIMRLLED +AE++L+ + +
Sbjct: 732 DVFKRLTEQNITLSVTDKFKERLIEEGYNPAYGARPLRRAIMRLLEDVLAEEILSGRVSD 791
Query: 660 GDSVIVDVDSDGNVTVLNG 678
GD+ +VD+D +G V V++G
Sbjct: 792 GDTAMVDIDEEGKVKVISG 810
>gi|425438612|ref|ZP_18818956.1| ATP-dependent Clp protease ATP-binding subunit clpA homolog
[Microcystis aeruginosa PCC 9717]
gi|425462269|ref|ZP_18841743.1| ATP-dependent Clp protease ATP-binding subunit clpA homolog
[Microcystis aeruginosa PCC 9808]
gi|425470166|ref|ZP_18849036.1| ATP-dependent Clp protease ATP-binding subunit clpA homolog
[Microcystis aeruginosa PCC 9701]
gi|440752077|ref|ZP_20931280.1| clp amino terminal domain protein [Microcystis aeruginosa TAIHU98]
gi|443661761|ref|ZP_21132789.1| clp amino terminal domain protein [Microcystis aeruginosa
DIANCHI905]
gi|159029700|emb|CAO87778.1| clpC [Microcystis aeruginosa PCC 7806]
gi|389720211|emb|CCH96065.1| ATP-dependent Clp protease ATP-binding subunit clpA homolog
[Microcystis aeruginosa PCC 9717]
gi|389824679|emb|CCI26165.1| ATP-dependent Clp protease ATP-binding subunit clpA homolog
[Microcystis aeruginosa PCC 9808]
gi|389884278|emb|CCI35401.1| ATP-dependent Clp protease ATP-binding subunit clpA homolog
[Microcystis aeruginosa PCC 9701]
gi|440176570|gb|ELP55843.1| clp amino terminal domain protein [Microcystis aeruginosa TAIHU98]
gi|443332247|gb|ELS46866.1| clp amino terminal domain protein [Microcystis aeruginosa
DIANCHI905]
Length = 821
Score = 1027 bits (2655), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 501/679 (73%), Positives = 593/679 (87%), Gaps = 10/679 (1%)
Query: 1 MVGESTEAVGAGVGGGSSG-NKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 59
M+GE+ E G S G K PTL+E+G+NLT++A EGKLDPVVGRQ +IERV+QILG
Sbjct: 141 MLGETAEVAA---GSSSQGRTKTPTLDEFGSNLTQMASEGKLDPVVGRQKEIERVIQILG 197
Query: 60 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 119
RRTKNNP LIGEPGVGKTAIAEGLAQRIA+ D+PD +E K+V+TLD+GLLVAGTKYRGEF
Sbjct: 198 RRTKNNPVLIGEPGVGKTAIAEGLAQRIANKDIPDILEEKRVVTLDIGLLVAGTKYRGEF 257
Query: 120 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 179
EERLKK+M+EI+Q+ ++L IDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTL
Sbjct: 258 EERLKKIMDEIRQAGNVVLVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTL 317
Query: 180 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 239
DEYRKHIE+D ALERRFQPV V EPSV+ETI+IL GLRERYE HHKL+ DEAL +AA+L
Sbjct: 318 DEYRKHIERDAALERRFQPVMVGEPSVEETIEILYGLRERYEQHHKLKILDEALEAAAKL 377
Query: 240 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 299
S +YISDRFLPDKAIDLIDEAGSRVRL ++QLP A+EL+KELRQI K+K++AVRGQDFE
Sbjct: 378 SDRYISDRFLPDKAIDLIDEAGSRVRLINSQLPPAAKELDKELRQILKQKDDAVRGQDFE 437
Query: 300 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 359
KAGELRDREM++K QI L S + E G+ P V +I HIV++WTG+PV K+
Sbjct: 438 KAGELRDREMEIKTQIRNLA------STKKGEDGNDEPFVDAEEIAHIVASWTGVPVNKL 491
Query: 360 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 419
+ ES++LL ME+TLH+R+IGQ++AVKA+SRAIRRARVGLKNPNRPIASFIFSGPTGVGK
Sbjct: 492 TETESEKLLHMEDTLHQRLIGQEDAVKAVSRAIRRARVGLKNPNRPIASFIFSGPTGVGK 551
Query: 420 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 479
+EL KALAAY+FGSE+AMIRLDMSE+MERHTVSKLIGSPPGYVGY EGGQLTEAVRRRPY
Sbjct: 552 TELTKALAAYFFGSEDAMIRLDMSEYMERHTVSKLIGSPPGYVGYNEGGQLTEAVRRRPY 611
Query: 480 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 539
TVVLFDEIEKAHPDVFNM+LQILEDGRLTD+KGRTVDFKNTLLIMTSN+GS VIEKGG
Sbjct: 612 TVVLFDEIEKAHPDVFNMLLQILEDGRLTDAKGRTVDFKNTLLIMTSNIGSKVIEKGGGG 671
Query: 540 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 599
+GF+ ++ ++ YNRI+SLV EELKQYFRPEFLNRLDE+IVFRQL K EVKEIA+I+LK
Sbjct: 672 LGFEFADNQAEAQYNRIRSLVNEELKQYFRPEFLNRLDEIIVFRQLNKEEVKEIAEILLK 731
Query: 600 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 659
+VF RL ++I L VT++F+ER++EEGYNP+YGARPLRRAIMRLLED +AE++L+ + +
Sbjct: 732 DVFKRLTEQNITLSVTDKFKERLIEEGYNPAYGARPLRRAIMRLLEDVLAEEILSGRVSD 791
Query: 660 GDSVIVDVDSDGNVTVLNG 678
GD+ +VD+D +G V V++G
Sbjct: 792 GDTAMVDIDEEGKVKVISG 810
>gi|440683788|ref|YP_007158583.1| ATPase AAA-2 domain protein [Anabaena cylindrica PCC 7122]
gi|428680907|gb|AFZ59673.1| ATPase AAA-2 domain protein [Anabaena cylindrica PCC 7122]
Length = 824
Score = 1026 bits (2653), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 505/677 (74%), Positives = 592/677 (87%), Gaps = 10/677 (1%)
Query: 1 MVGESTEAVGAGVGGGSSG-NKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 59
M+GE+ E GGG SG K PTL+E+G+NLT++A + KLDPVVGR +IERV+QILG
Sbjct: 141 MLGETAEV---SPGGGPSGRTKTPTLDEFGSNLTQMATDNKLDPVVGRAKEIERVIQILG 197
Query: 60 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 119
RRTKNNP LIGEPGVGKTAIAEGLA RIA+ DVPD +E K+V+TLD+GLLVAGTKYRGEF
Sbjct: 198 RRTKNNPVLIGEPGVGKTAIAEGLASRIANKDVPDILEDKRVVTLDIGLLVAGTKYRGEF 257
Query: 120 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 179
EERLKK+M+EI+ + +IL IDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTL
Sbjct: 258 EERLKKIMDEIRSAGNVILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTL 317
Query: 180 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 239
DEYRKHIE+D ALERRFQPV V EPSV ETI+IL GLRERYE HHKL+ +DEAL +AA+L
Sbjct: 318 DEYRKHIERDAALERRFQPVMVGEPSVAETIEILFGLRERYEQHHKLKISDEALEAAAKL 377
Query: 240 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 299
S +YISDR+LPDKAIDL+DEAGSRVRL ++QLP A+EL+KELRQI KEK++AVR QDF+
Sbjct: 378 SDRYISDRYLPDKAIDLVDEAGSRVRLINSQLPPAAKELDKELRQILKEKDDAVRSQDFD 437
Query: 300 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGD-VGPVVTEVDIQHIVSAWTGIPVEK 358
+AGELRDREM++KA+I A+ SK GD + PVVTE DI HIV++WTG+PV K
Sbjct: 438 RAGELRDREMEIKAEIRAIAQ-----SKTNATGGDGLEPVVTEEDIAHIVASWTGVPVNK 492
Query: 359 VSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVG 418
++ ES++LL ME+TLH+R+IGQD+AVKA+SRAIRRARVGLKNPNRPIASF+FSGPTGVG
Sbjct: 493 LTESESEKLLHMEDTLHQRLIGQDDAVKAVSRAIRRARVGLKNPNRPIASFVFSGPTGVG 552
Query: 419 KSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRP 478
K+ELAK+LA+Y+FGSEEAMIRLDMSE+MERHTVSKLIGSPPGYVGY EGGQLTEAVRRRP
Sbjct: 553 KTELAKSLASYFFGSEEAMIRLDMSEYMERHTVSKLIGSPPGYVGYNEGGQLTEAVRRRP 612
Query: 479 YTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR 538
YTVVLFDEIEKAHPDVFNM+LQILEDGRLTD+KGRTVDFKNTLLI+TSN+GS VIEKGG
Sbjct: 613 YTVVLFDEIEKAHPDVFNMLLQILEDGRLTDAKGRTVDFKNTLLILTSNIGSKVIEKGGS 672
Query: 539 RIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIML 598
IGF+ D ++ YNRI+SLV EELKQYFRPEFLNRLDE+IVFRQL K EV +IA+IML
Sbjct: 673 GIGFEFSEDATETQYNRIRSLVNEELKQYFRPEFLNRLDEIIVFRQLNKAEVTQIAEIML 732
Query: 599 KEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIK 658
KEVF RL K I L+VT+RF++R++ EGY+PSYGARPLRRAIMRLLEDS+AE++L+ IK
Sbjct: 733 KEVFGRLTDKGIVLEVTDRFKDRLITEGYSPSYGARPLRRAIMRLLEDSLAEEILSGRIK 792
Query: 659 EGDSVIVDVDSDGNVTV 675
+GD+ +VDVD +G V V
Sbjct: 793 DGDTALVDVDENGVVQV 809
>gi|425443940|ref|ZP_18824003.1| ATP-dependent Clp protease ATP-binding subunit clpA homolog
[Microcystis aeruginosa PCC 9443]
gi|425455767|ref|ZP_18835478.1| ATP-dependent Clp protease ATP-binding subunit clpA homolog
[Microcystis aeruginosa PCC 9807]
gi|389732831|emb|CCI03294.1| ATP-dependent Clp protease ATP-binding subunit clpA homolog
[Microcystis aeruginosa PCC 9443]
gi|389803296|emb|CCI17774.1| ATP-dependent Clp protease ATP-binding subunit clpA homolog
[Microcystis aeruginosa PCC 9807]
Length = 821
Score = 1026 bits (2653), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 502/679 (73%), Positives = 593/679 (87%), Gaps = 10/679 (1%)
Query: 1 MVGESTEAVGAGVGGGSSG-NKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 59
M+GE+ E G S G K PTL+E+G+NLT++A EGKLDPVVGRQ +IERV+QILG
Sbjct: 141 MLGETAEVAA---GSSSQGRTKTPTLDEFGSNLTQMAGEGKLDPVVGRQKEIERVIQILG 197
Query: 60 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 119
RRTKNNP LIGEPGVGKTAIAEGLAQRIA+ D+PD +E K+V+TLD+GLLVAGTKYRGEF
Sbjct: 198 RRTKNNPVLIGEPGVGKTAIAEGLAQRIANKDIPDILEEKRVVTLDIGLLVAGTKYRGEF 257
Query: 120 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 179
EERLKK+M+EI+Q+ +IL IDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTL
Sbjct: 258 EERLKKIMDEIRQAGNVILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTL 317
Query: 180 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 239
DEYRKHIE+D ALERRFQPV V EPSV+ETI+IL GLRERYE HHKL+ DEAL +AA+L
Sbjct: 318 DEYRKHIERDAALERRFQPVMVGEPSVEETIEILYGLRERYEQHHKLKILDEALEAAAKL 377
Query: 240 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 299
S +YISDRFLPDKAIDLIDEAGSRVRL ++QLP A+EL+KELRQI K+K++AVRGQDFE
Sbjct: 378 SDRYISDRFLPDKAIDLIDEAGSRVRLINSQLPPAAKELDKELRQILKQKDDAVRGQDFE 437
Query: 300 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 359
KAGELRDREM++K QI L S + E G+ P V +I HIV++WTG+PV K+
Sbjct: 438 KAGELRDREMEIKTQIRNLA------STKKGEDGNDEPFVDAEEIAHIVASWTGVPVNKL 491
Query: 360 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 419
+ ES++LL ME+TLH+R+IGQ++AVKA+SRAIRRARVGLKNPNRPIASFIFSGPTGVGK
Sbjct: 492 TETESEKLLHMEDTLHQRLIGQEDAVKAVSRAIRRARVGLKNPNRPIASFIFSGPTGVGK 551
Query: 420 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 479
+EL KALAAY+FGSE+AMIRLDMSE+MERHTVSKLIGSPPGYVGY EGGQLTEAVRRRPY
Sbjct: 552 TELTKALAAYFFGSEDAMIRLDMSEYMERHTVSKLIGSPPGYVGYNEGGQLTEAVRRRPY 611
Query: 480 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 539
TVVLFDEIEKAHPDVFNM+LQILEDGRLTD+KGRTVDFKNTLLIMTSN+GS VIEKGG
Sbjct: 612 TVVLFDEIEKAHPDVFNMLLQILEDGRLTDAKGRTVDFKNTLLIMTSNIGSKVIEKGGGG 671
Query: 540 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 599
+GF+ ++ ++ YNRI+SLV EELKQYFRPEFLNRLDE+IVFRQL K EVKEIA+I+LK
Sbjct: 672 LGFEFADNQAEAQYNRIRSLVNEELKQYFRPEFLNRLDEIIVFRQLNKEEVKEIAEILLK 731
Query: 600 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 659
+VF RL ++I L VT++F+ER++EEGYNP+YGARPLRRAIMRLLED +AE++L+ + +
Sbjct: 732 DVFKRLTEQNITLSVTDKFKERLIEEGYNPAYGARPLRRAIMRLLEDVLAEEILSGRVSD 791
Query: 660 GDSVIVDVDSDGNVTVLNG 678
GD+ +VD+D +G V V++G
Sbjct: 792 GDTAMVDIDEEGKVKVISG 810
>gi|254527057|ref|ZP_05139109.1| ATPase, AAA family [Prochlorococcus marinus str. MIT 9202]
gi|221538481|gb|EEE40934.1| ATPase, AAA family [Prochlorococcus marinus str. MIT 9202]
Length = 842
Score = 1026 bits (2653), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 503/699 (71%), Positives = 598/699 (85%), Gaps = 13/699 (1%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
M+GE+ E VG G S K TL+E+GTNLTKLA E KLDPVVGR +I+RVVQILGR
Sbjct: 141 MLGETAE-VGTGGSSTKSNLKTATLDEFGTNLTKLASESKLDPVVGRHSEIDRVVQILGR 199
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNP LIGEPGVGKTAIAEGLAQRI +GD+PD +E K+V+TLD+GLLVAGTKYRGEFE
Sbjct: 200 RTKNNPVLIGEPGVGKTAIAEGLAQRIQTGDIPDILEDKRVLTLDIGLLVAGTKYRGEFE 259
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
ERLKK+MEEIK + +IL IDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTLD
Sbjct: 260 ERLKKIMEEIKSAGNVILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLD 319
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRKHIE+D ALERRFQPV V EPS+++TI+ILKGLRERYE HH+L+ TD+AL +AA L
Sbjct: 320 EYRKHIERDAALERRFQPVMVGEPSIEDTIEILKGLRERYEQHHRLKITDDALEAAAHLG 379
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
+YISDRFLPDKAIDLIDEAGSRVRL +++LP EA+E+++ELRQ+ K+K E+VR Q+F++
Sbjct: 380 DRYISDRFLPDKAIDLIDEAGSRVRLINSKLPPEAKEIDRELRQVQKQKEESVRDQNFDQ 439
Query: 301 AGELRDREMDLKAQISALVDKGKEMSKAETEAGD-----------VGPVVTEVDIQHIVS 349
AG+LR++EM+L A+I +++ KE + + D P+V+E D+ HIV+
Sbjct: 440 AGQLREKEMELSAKIKEVLENKKESTVGDKSNADNKSVKGDSTLLQSPLVSEEDVAHIVA 499
Query: 350 AWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASF 409
+WTG+PV+K++ ES +LL MEETLH+R+IGQDEAVKA+SRAIRRARVGLKNPNRPIASF
Sbjct: 500 SWTGVPVQKLTETESVKLLNMEETLHQRLIGQDEAVKAVSRAIRRARVGLKNPNRPIASF 559
Query: 410 IFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQ 469
IFSGPTGVGK+EL K+LA+Y+FGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVG+ EGGQ
Sbjct: 560 IFSGPTGVGKTELTKSLASYFFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGFNEGGQ 619
Query: 470 LTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVG 529
LTEAVRRRPYTVVLFDE+EKAHPDVFN++LQ+LEDGRLTDSKGRTVDFKNTLLIMTSN+G
Sbjct: 620 LTEAVRRRPYTVVLFDEVEKAHPDVFNLLLQLLEDGRLTDSKGRTVDFKNTLLIMTSNIG 679
Query: 530 SSVIEKGGRRIGFDLDYDE-KDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKL 588
S VIEKGG +GF+ D +DS YNRIKSLV EELKQYFRPEFLNRLDE+IVFRQLTK
Sbjct: 680 SKVIEKGGGGLGFEFSGDSVEDSQYNRIKSLVNEELKQYFRPEFLNRLDEIIVFRQLTKN 739
Query: 589 EVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSM 648
EVKEIA+IML+EVF RL+ K I+L VT+ F+ER+VEEGYNPSYGARPLRRA+MRLLEDS+
Sbjct: 740 EVKEIAEIMLQEVFARLQDKGIKLNVTDAFKERLVEEGYNPSYGARPLRRAVMRLLEDSL 799
Query: 649 AEKMLAREIKEGDSVIVDVDSDGNVTVLNGSSGAPESLA 687
AE++L+ IK+GD +VD+D + VT+ S + + LA
Sbjct: 800 AEEVLSGRIKDGDKALVDIDDNKKVTINISSEESSQELA 838
>gi|443311631|ref|ZP_21041257.1| ATPase with chaperone activity, ATP-binding subunit [Synechocystis
sp. PCC 7509]
gi|442778360|gb|ELR88627.1| ATPase with chaperone activity, ATP-binding subunit [Synechocystis
sp. PCC 7509]
Length = 829
Score = 1026 bits (2652), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 502/677 (74%), Positives = 595/677 (87%), Gaps = 6/677 (0%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
M+GE+ E V AG G + K PTL+E+G+NLT++A +GKLDPVVGR +IERV+QILGR
Sbjct: 141 MLGETAE-VNAGSPSGRT--KTPTLDEFGSNLTQMAADGKLDPVVGRAKEIERVIQILGR 197
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNP LIGEPGVGKTAIAEGLA RIA+ D+PD +E K+V+TLD+GLLVAGTKYRGEFE
Sbjct: 198 RTKNNPVLIGEPGVGKTAIAEGLASRIANKDIPDILEDKRVVTLDIGLLVAGTKYRGEFE 257
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
ERLKK+M+EI+ + +IL IDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTLD
Sbjct: 258 ERLKKIMDEIRSAGNVILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLD 317
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRKHIE+D ALERRFQPV V EPSVDETI+IL GLRERYE HHKL+ +DEAL +AA+LS
Sbjct: 318 EYRKHIERDAALERRFQPVMVGEPSVDETIEILFGLRERYEQHHKLKISDEALFAAAKLS 377
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
+YISDRFLPDKAIDL+DEAGSRVRL ++ LP A++L+KELR++ KEK++AVRGQDF K
Sbjct: 378 DRYISDRFLPDKAIDLMDEAGSRVRLINSALPPAAKDLDKELRKVLKEKDDAVRGQDFGK 437
Query: 301 AGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVS 360
AGELRDREM++K +I AL ++ + G+ PVVTE DI HIV++WTG+PV K++
Sbjct: 438 AGELRDREMEIKGEIRALSQNKANTTRPD---GEDAPVVTEEDIAHIVASWTGVPVSKLT 494
Query: 361 TDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 420
ES++L+ ME+TLH+R+IGQ+EAV+A+S+AIRRARVGLKNPNRPIASF+FSGPTGVGK+
Sbjct: 495 ESESEKLMHMEDTLHQRLIGQEEAVRAVSKAIRRARVGLKNPNRPIASFVFSGPTGVGKT 554
Query: 421 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 480
EL K+LAAY+FGSE+AMIRLDMSE+MERHTVSKLIGSPPGYVGY EGGQLTEAVRRRPYT
Sbjct: 555 ELTKSLAAYFFGSEDAMIRLDMSEYMERHTVSKLIGSPPGYVGYNEGGQLTEAVRRRPYT 614
Query: 481 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI 540
VVLFDEIEKAHPDVFNM+LQILEDGRLTD+KGRTVDFKNTLLI+TSN+GS VIEKG +
Sbjct: 615 VVLFDEIEKAHPDVFNMLLQILEDGRLTDAKGRTVDFKNTLLILTSNIGSKVIEKGAAGL 674
Query: 541 GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 600
GF+L D +S YNRIKSLV EELKQYFRPEFLNRLDE+IVFRQLT+ EVKEIADI+LKE
Sbjct: 675 GFELAQDVAESQYNRIKSLVNEELKQYFRPEFLNRLDEIIVFRQLTRDEVKEIADILLKE 734
Query: 601 VFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEG 660
VF+RL K I L VTERF++R+VEEGYNPSYGARPLRRAIMRLLEDS+AE++L+ +++G
Sbjct: 735 VFNRLMEKGITLDVTERFKDRLVEEGYNPSYGARPLRRAIMRLLEDSLAEEILSGRVRDG 794
Query: 661 DSVIVDVDSDGNVTVLN 677
D+ +VDVD G V V++
Sbjct: 795 DTALVDVDETGIVKVVS 811
>gi|376001877|ref|ZP_09779731.1| ATP-dependent Clp protease regulatory subunit [Arthrospira sp. PCC
8005]
gi|423062254|ref|ZP_17051044.1| ATPase AAA-2 [Arthrospira platensis C1]
gi|375329788|emb|CCE15484.1| ATP-dependent Clp protease regulatory subunit [Arthrospira sp. PCC
8005]
gi|406716162|gb|EKD11313.1| ATPase AAA-2 [Arthrospira platensis C1]
Length = 823
Score = 1026 bits (2652), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 512/679 (75%), Positives = 594/679 (87%), Gaps = 8/679 (1%)
Query: 1 MVGESTEAVGAGVGGGSSG-NKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 59
M+GE+ E GGSSG K PTL+E+G+NLT++A EGKLDPVVGRQ +IERV+QILG
Sbjct: 141 MLGETAEVTA----GGSSGRTKTPTLDEFGSNLTQMAAEGKLDPVVGRQKEIERVIQILG 196
Query: 60 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 119
RRTKNNP LIGEPGVGKTAIAEGLAQRIA D+PD +E K+V+TLD+GLLVAGTKYRGEF
Sbjct: 197 RRTKNNPVLIGEPGVGKTAIAEGLAQRIAQNDIPDILEDKRVVTLDIGLLVAGTKYRGEF 256
Query: 120 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 179
EERLKK+M+EI+ +IL IDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTL
Sbjct: 257 EERLKKIMDEIRSCGNVILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTL 316
Query: 180 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 239
DEYRKHIE+D ALERRFQPV V EPSV ETI+IL GLRERYE HHKL+ DEAL +AA+L
Sbjct: 317 DEYRKHIERDAALERRFQPVMVGEPSVPETIEILYGLRERYEQHHKLKIIDEALEAAAKL 376
Query: 240 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 299
S +YISDR+LPDKAIDLIDEAGSRVRL ++QLP A+EL+KELRQ+ KEK++AVR QDF+
Sbjct: 377 SDRYISDRYLPDKAIDLIDEAGSRVRLINSQLPPAAKELDKELRQVLKEKDDAVRSQDFD 436
Query: 300 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 359
+AGELRDREM++K+QI A+ K ++ + D P+VTE DI IV++WTGIPV K+
Sbjct: 437 RAGELRDREMEIKSQIRAIAQNKKSETRTDD---DDSPMVTEEDIAQIVASWTGIPVNKL 493
Query: 360 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 419
+ ES++LL ME+TLH+R+IGQ+EAVKA+SRAIRRARVGLKNPNRPIASFIFSGPTGVGK
Sbjct: 494 TESESEKLLHMEDTLHQRLIGQEEAVKAVSRAIRRARVGLKNPNRPIASFIFSGPTGVGK 553
Query: 420 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 479
+EL K+LAAY+FGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGY EGGQLTEAVRRRPY
Sbjct: 554 TELTKSLAAYFFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYNEGGQLTEAVRRRPY 613
Query: 480 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 539
TVVLFDEIEKAHPDVFNM+LQILEDGRLTD+KGRTVDFKNTL+IMTSN+GS VIEKGG
Sbjct: 614 TVVLFDEIEKAHPDVFNMLLQILEDGRLTDAKGRTVDFKNTLIIMTSNIGSKVIEKGGGG 673
Query: 540 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 599
+GF+ + ++ D+ YNRI++LV EELKQYFRPEFLNRLDE+IVFRQL K EVKEIA IML
Sbjct: 674 LGFEFEENQADAQYNRIRNLVNEELKQYFRPEFLNRLDEIIVFRQLNKDEVKEIAVIMLN 733
Query: 600 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 659
EVF RL K I L++T+RF+ER+VEEGYNPSYGARPLRRAIMRLLEDS+AE++L+ +KE
Sbjct: 734 EVFGRLTEKGIRLEITDRFKERLVEEGYNPSYGARPLRRAIMRLLEDSLAEEILSGRVKE 793
Query: 660 GDSVIVDVDSDGNVTVLNG 678
GD+ IVDV+ DG V VL G
Sbjct: 794 GDTAIVDVNEDGQVQVLQG 812
>gi|126696533|ref|YP_001091419.1| ClpC [Prochlorococcus marinus str. MIT 9301]
gi|126543576|gb|ABO17818.1| ClpC [Prochlorococcus marinus str. MIT 9301]
Length = 841
Score = 1025 bits (2651), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 506/699 (72%), Positives = 602/699 (86%), Gaps = 14/699 (2%)
Query: 1 MVGESTEAVGAGVGGGSSGN-KMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 59
M+GE+ E VG G G + GN K TL+E+GTNLTKLA E KLDPVVGR +I+RVVQILG
Sbjct: 141 MLGETAE-VGTG-GSSNKGNLKTATLDEFGTNLTKLASESKLDPVVGRHSEIDRVVQILG 198
Query: 60 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 119
RRTKNNP LIGEPGVGKTAIAEGLAQRI +GD+PD +E K+V+TLD+GLLVAGTKYRGEF
Sbjct: 199 RRTKNNPVLIGEPGVGKTAIAEGLAQRIQTGDIPDILEDKRVLTLDIGLLVAGTKYRGEF 258
Query: 120 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 179
EERLKK+MEEIK + +IL IDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTL
Sbjct: 259 EERLKKIMEEIKSAGNVILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTL 318
Query: 180 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 239
DEYRKHIE+D ALERRFQPV V EPS+++TI+ILKGLRERYE HH+L+ TD+AL +AA L
Sbjct: 319 DEYRKHIERDAALERRFQPVMVGEPSIEDTIEILKGLRERYEQHHRLKITDDALEAAAHL 378
Query: 240 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 299
+YISDRFLPDKAIDLIDEAGSRVRL +++LP EA+++++ELRQI K+K E+VR Q+F+
Sbjct: 379 GDRYISDRFLPDKAIDLIDEAGSRVRLINSKLPPEAKQIDRELRQIQKQKEESVRDQNFD 438
Query: 300 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGD----------VGPVVTEVDIQHIVS 349
+AG+LR++EM+L A+I ++D KE + + D P+V+E D+ HIV+
Sbjct: 439 QAGQLREKEMELSAKIKEVLDNKKESTAVDQTDPDNSAKSDSKLLQSPLVSEEDVAHIVA 498
Query: 350 AWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASF 409
+WTG+PV+K++ ES +LL MEETLH+R+IGQDEAVKA+SRAIRRARVGLKNPNRPIASF
Sbjct: 499 SWTGVPVQKLTETESVKLLNMEETLHQRLIGQDEAVKAVSRAIRRARVGLKNPNRPIASF 558
Query: 410 IFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQ 469
IFSGPTGVGK+EL K+LA+Y+FGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVG+ EGGQ
Sbjct: 559 IFSGPTGVGKTELTKSLASYFFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGFNEGGQ 618
Query: 470 LTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVG 529
LTEAVRRRPYTVVLFDE+EKAHPDVFN++LQ+LEDGRLTDSKGRTVDFKNTLLIMTSN+G
Sbjct: 619 LTEAVRRRPYTVVLFDEVEKAHPDVFNLLLQLLEDGRLTDSKGRTVDFKNTLLIMTSNIG 678
Query: 530 SSVIEKGGRRIGFDLDYDE-KDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKL 588
S VIEKGG +GF+ D +DS YNRIKSLV EELKQYFRPEFLNRLDE+IVFRQLTK
Sbjct: 679 SKVIEKGGGGLGFEFSGDSVEDSQYNRIKSLVNEELKQYFRPEFLNRLDEIIVFRQLTKN 738
Query: 589 EVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSM 648
EVKEIA+IML+EVF RL+ K I+L VT+ F+ER+VEEGYNPSYGARPLRRA+MRLLEDS+
Sbjct: 739 EVKEIAEIMLQEVFIRLQDKGIKLNVTDAFKERLVEEGYNPSYGARPLRRAVMRLLEDSL 798
Query: 649 AEKMLAREIKEGDSVIVDVDSDGNVTVLNGSSGAPESLA 687
AE++L+ IK+GD+ +VD+D + VT+ S + + LA
Sbjct: 799 AEEVLSGRIKDGDNALVDIDDNKKVTINISSEESSQELA 837
>gi|425451878|ref|ZP_18831697.1| ATP-dependent Clp protease ATP-binding subunit clpA homolog
[Microcystis aeruginosa PCC 7941]
gi|389766574|emb|CCI07823.1| ATP-dependent Clp protease ATP-binding subunit clpA homolog
[Microcystis aeruginosa PCC 7941]
Length = 821
Score = 1025 bits (2651), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 501/679 (73%), Positives = 592/679 (87%), Gaps = 10/679 (1%)
Query: 1 MVGESTEAVGAGVGGGSSG-NKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 59
M+GE+ E G S G K PTL+E+G+NLT++A EGKLDPVVGRQ +IERV+QILG
Sbjct: 141 MLGETAEVAA---GSSSQGRTKTPTLDEFGSNLTQMASEGKLDPVVGRQKEIERVIQILG 197
Query: 60 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 119
RRTKNNP LIGEPGVGKTAIAEGLAQRIA+ D+PD +E K+V+TLD+GLLVAGTKYRGEF
Sbjct: 198 RRTKNNPVLIGEPGVGKTAIAEGLAQRIANKDIPDILEEKRVVTLDIGLLVAGTKYRGEF 257
Query: 120 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 179
EERLKK+M+EI+Q+ ++L IDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTL
Sbjct: 258 EERLKKIMDEIRQAGNVVLVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTL 317
Query: 180 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 239
DEYRKHIE+D ALERRFQPV V EPSV+ETI+IL GLRERYE HHKL+ DEAL +AA+L
Sbjct: 318 DEYRKHIERDAALERRFQPVMVGEPSVEETIEILYGLRERYEQHHKLKILDEALEAAAKL 377
Query: 240 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 299
S +YISDRFLPDKAIDLIDEAGSRVRL ++QLP A+EL+KELRQI K+K++AVRGQDFE
Sbjct: 378 SDRYISDRFLPDKAIDLIDEAGSRVRLINSQLPPAAKELDKELRQILKQKDDAVRGQDFE 437
Query: 300 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 359
KAGELRDREM++K QI L S + E G+ P V +I HIV++WTG+PV K+
Sbjct: 438 KAGELRDREMEIKTQIRNLA------STKKGEDGNDEPFVDAEEIAHIVASWTGVPVNKL 491
Query: 360 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 419
+ ES++LL ME+TLH+R+IGQ++AVKA+SRAIRRARVGLKNPNRPIASFIFSGPTGVGK
Sbjct: 492 TETESEKLLHMEDTLHQRLIGQEDAVKAVSRAIRRARVGLKNPNRPIASFIFSGPTGVGK 551
Query: 420 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 479
+EL KALAAY+FGSE+AMIRLDMSE+MERHTVSKLIGSPPGYVGY EGGQLTEAVRRRPY
Sbjct: 552 TELTKALAAYFFGSEDAMIRLDMSEYMERHTVSKLIGSPPGYVGYNEGGQLTEAVRRRPY 611
Query: 480 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 539
TVVLFDEIEKAHPDVFNM+LQILEDGRLTD+KGRTVDFKNTLLIMTSN+GS VIEKGG
Sbjct: 612 TVVLFDEIEKAHPDVFNMLLQILEDGRLTDAKGRTVDFKNTLLIMTSNIGSKVIEKGGGG 671
Query: 540 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 599
+GF+ ++ ++ YNRI+SLV EELKQYFRPEFLNRLDE+IVFRQL K EVKEIA+I+LK
Sbjct: 672 LGFEFADNQAEAQYNRIRSLVNEELKQYFRPEFLNRLDEIIVFRQLNKEEVKEIAEILLK 731
Query: 600 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 659
+VF RL ++I L VT++F+ER++EEGYNP+YGARPLRRAIMRLLED +AE++L+ +
Sbjct: 732 DVFKRLTEQNITLSVTDKFKERLIEEGYNPAYGARPLRRAIMRLLEDVLAEEILSGRVSG 791
Query: 660 GDSVIVDVDSDGNVTVLNG 678
GD+ +VD+D +G V V++G
Sbjct: 792 GDTAMVDIDEEGKVKVISG 810
>gi|443323335|ref|ZP_21052342.1| ATPase with chaperone activity, ATP-binding subunit [Gloeocapsa sp.
PCC 73106]
gi|442786899|gb|ELR96625.1| ATPase with chaperone activity, ATP-binding subunit [Gloeocapsa sp.
PCC 73106]
Length = 820
Score = 1025 bits (2651), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 496/676 (73%), Positives = 589/676 (87%), Gaps = 8/676 (1%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
M+GE+ E G NK PTL+E+G+NLT++A EGKLDPVVGRQ +IERV+QILGR
Sbjct: 141 MLGETAEVAAGSTNQGR--NKTPTLDEFGSNLTQMASEGKLDPVVGRQKEIERVIQILGR 198
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNP LIGEPGVGKTAIAEGLAQRIA+ D+PD +E K+V+TLD+GLLVAGTKYRGEFE
Sbjct: 199 RTKNNPVLIGEPGVGKTAIAEGLAQRIANKDIPDILEDKRVVTLDIGLLVAGTKYRGEFE 258
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
ERLKK+M+EI+Q+ ++L IDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTLD
Sbjct: 259 ERLKKIMDEIRQAGNVVLVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLD 318
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRKHIE+D ALERRFQPV V EP+V ETI+IL GLRERYE HHKL DEAL +AA+LS
Sbjct: 319 EYRKHIERDAALERRFQPVMVGEPTVAETIEILYGLRERYEQHHKLSILDEALEAAAKLS 378
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
++YISDR+LPDKAIDLIDEAGSRVRL ++QLP A+EL++ELRQI KEK++AVR Q+F+
Sbjct: 379 HRYISDRYLPDKAIDLIDEAGSRVRLLNSQLPPAAKELDRELRQILKEKDDAVRAQNFDL 438
Query: 301 AGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVS 360
AGE+RDREM++KAQI A+ S +TE+ + PVV +I HIV++WTG+PV K++
Sbjct: 439 AGEMRDREMEIKAQIRAIA------STKKTESDNENPVVDAEEIAHIVASWTGVPVNKLT 492
Query: 361 TDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 420
ES++LL ME+TLH+R+IGQ++AVKA+SRAIRRARVGLKNPNRPIASFIFSGPTGVGK+
Sbjct: 493 ESESEKLLHMEDTLHQRLIGQEDAVKAVSRAIRRARVGLKNPNRPIASFIFSGPTGVGKT 552
Query: 421 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 480
EL KALAAY+FGSE++MIRLDMSE+MERHTVSKLIGSPPGYVGY EGGQLTEAVRRRPYT
Sbjct: 553 ELTKALAAYFFGSEDSMIRLDMSEYMERHTVSKLIGSPPGYVGYNEGGQLTEAVRRRPYT 612
Query: 481 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI 540
VVLFDEIEKAHPDVFNM+LQILEDGRLTD+KGRTVDFKNTLLIMTSN+GS VIEKGG +
Sbjct: 613 VVLFDEIEKAHPDVFNMLLQILEDGRLTDAKGRTVDFKNTLLIMTSNIGSKVIEKGGGGL 672
Query: 541 GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 600
GF+ D+ +S YNRI+SLV EELK YFRPEFLNRLDE+IVFRQL K EV EIA+I+LK+
Sbjct: 673 GFEFAEDKTESQYNRIRSLVNEELKNYFRPEFLNRLDEIIVFRQLNKEEVTEIAEILLKD 732
Query: 601 VFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEG 660
VF RL K+I L+VT +F+ER+VEEGYNP+YGARPLRRAIMRLLED++AE++L+ +I EG
Sbjct: 733 VFSRLTDKNITLEVTNKFKERLVEEGYNPAYGARPLRRAIMRLLEDALAEEILSGKISEG 792
Query: 661 DSVIVDVDSDGNVTVL 676
D IVD + +G V ++
Sbjct: 793 DKAIVDTNDEGKVVII 808
>gi|425437952|ref|ZP_18818364.1| ATP-dependent Clp protease ATP-binding subunit clpA homolog
[Microcystis aeruginosa PCC 9432]
gi|389676952|emb|CCH94083.1| ATP-dependent Clp protease ATP-binding subunit clpA homolog
[Microcystis aeruginosa PCC 9432]
Length = 821
Score = 1025 bits (2651), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 501/679 (73%), Positives = 592/679 (87%), Gaps = 10/679 (1%)
Query: 1 MVGESTEAVGAGVGGGSSG-NKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 59
M+GE+ E G S G K PTL+E+G+NLT++A EGKLDPVVGRQ +IERV+QILG
Sbjct: 141 MLGETAEVAA---GSSSQGRTKTPTLDEFGSNLTQMASEGKLDPVVGRQKEIERVIQILG 197
Query: 60 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 119
RRTKNNP LIGEPGVGKTAIAEGLAQRIA+ D+PD +E K+V+TLD+GLLVAGTKYRGEF
Sbjct: 198 RRTKNNPVLIGEPGVGKTAIAEGLAQRIANKDIPDILEEKRVVTLDIGLLVAGTKYRGEF 257
Query: 120 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 179
EERLKK+M+EI+Q+ ++L IDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTL
Sbjct: 258 EERLKKIMDEIRQAGNVVLVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTL 317
Query: 180 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 239
DEYRKHIE+D ALERRFQPV V EPSV+ETI+IL GLRERYE HHKL+ DEAL +AA+L
Sbjct: 318 DEYRKHIERDAALERRFQPVMVGEPSVEETIEILYGLRERYEQHHKLKILDEALEAAAKL 377
Query: 240 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 299
S +YISDRFLPDKAIDLIDEAGSRVRL ++QLP A+EL+KELRQI K+K++AVRGQDFE
Sbjct: 378 SDRYISDRFLPDKAIDLIDEAGSRVRLINSQLPPAAKELDKELRQILKQKDDAVRGQDFE 437
Query: 300 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 359
KAGELRDREM++K QI L S + E G+ P V +I HIV++WTG+PV K+
Sbjct: 438 KAGELRDREMEIKTQIRNLA------STKKGEDGNDEPFVDAEEIAHIVASWTGVPVNKL 491
Query: 360 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 419
+ ES++LL ME+TLH+R+IGQ++AVKA+SRAIRRARVGLKNPNRPIASFIFSGPTGVGK
Sbjct: 492 TETESEKLLHMEDTLHQRLIGQEDAVKAVSRAIRRARVGLKNPNRPIASFIFSGPTGVGK 551
Query: 420 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 479
+EL KALAAY+FGSE+AMIRLDMSE+MERHTVSKLIGSPPGYVGY EGGQLTEAVRRRPY
Sbjct: 552 TELTKALAAYFFGSEDAMIRLDMSEYMERHTVSKLIGSPPGYVGYNEGGQLTEAVRRRPY 611
Query: 480 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 539
TVVLFDEIEKAHPDVFNM+LQILEDGRLTD+KGRTVDFKNTLLIMTSN+GS VIEKGG
Sbjct: 612 TVVLFDEIEKAHPDVFNMLLQILEDGRLTDAKGRTVDFKNTLLIMTSNIGSKVIEKGGGG 671
Query: 540 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 599
+GF+ ++ ++ YNRI+SLV EELKQYFRPEFLNRLDE+IVFRQL K EVKEIA+I+LK
Sbjct: 672 LGFEFADNQAEAQYNRIRSLVNEELKQYFRPEFLNRLDEIIVFRQLNKEEVKEIAEILLK 731
Query: 600 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 659
+VF RL ++I L VT++F+ER++EEGYNP+YGARPLRRAIMRLLED +AE++L+ +
Sbjct: 732 DVFKRLTEQNITLSVTDKFKERLIEEGYNPAYGARPLRRAIMRLLEDVLAEEILSGRVSG 791
Query: 660 GDSVIVDVDSDGNVTVLNG 678
GD+ +VD+D +G V V++G
Sbjct: 792 GDTAMVDIDEEGKVKVISG 810
>gi|428303861|ref|YP_007140686.1| ATPase [Crinalium epipsammum PCC 9333]
gi|428245396|gb|AFZ11176.1| ATPase AAA-2 domain protein [Crinalium epipsammum PCC 9333]
Length = 826
Score = 1025 bits (2650), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 498/676 (73%), Positives = 593/676 (87%), Gaps = 7/676 (1%)
Query: 1 MVGESTEAVGAGVGGGSSG-NKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 59
M+GE+ E G G S G K PTL+E+G+NLT++A +GKLDPVVGR +IERV+QILG
Sbjct: 141 MLGETAEV---GAGASSQGRTKTPTLDEFGSNLTQMAADGKLDPVVGRSKEIERVIQILG 197
Query: 60 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 119
RRTKNNP LIGEPGVGKTAIAEGLAQRIA+ D+PD +E K+V+TLD+GLLVAGTKYRGEF
Sbjct: 198 RRTKNNPVLIGEPGVGKTAIAEGLAQRIANNDIPDILEEKRVVTLDIGLLVAGTKYRGEF 257
Query: 120 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 179
EERLKK+M+EI+Q+ +IL IDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTL
Sbjct: 258 EERLKKIMDEIRQAGNVILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTL 317
Query: 180 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 239
DEYRKHIE+D ALERRFQPV V EP+VDETI+IL GLRERYE HHKL+ +D AL +AA+L
Sbjct: 318 DEYRKHIERDAALERRFQPVMVGEPTVDETIEILHGLRERYEQHHKLKISDLALEAAAKL 377
Query: 240 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 299
S +YISDRFLPDKAIDL+DEAGSRVRL ++QLP A+EL+KELR++ KEK+EAVR QDF+
Sbjct: 378 SDRYISDRFLPDKAIDLVDEAGSRVRLINSQLPAAAKELDKELRKVLKEKDEAVRSQDFD 437
Query: 300 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 359
+AGELRDREM++KA+I ++ K K+ EA PVVTE DI IV++WTG+PV K+
Sbjct: 438 RAGELRDREMEIKAEIRSIAQTKKSDPKSSDEAS---PVVTEEDIAQIVASWTGVPVNKL 494
Query: 360 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 419
+ ES++LL ME+TLH+R+IGQ++AVKA+SRAIRRARVGLKNPNRPIASFIFSGPTGVGK
Sbjct: 495 TESESEKLLHMEDTLHQRLIGQEDAVKAVSRAIRRARVGLKNPNRPIASFIFSGPTGVGK 554
Query: 420 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 479
+ELAK+LA+Y+FGSEEAMIRLDMSE+MERHTVSKLIGSPPGYVGY EGGQLTEAVRRRPY
Sbjct: 555 TELAKSLASYFFGSEEAMIRLDMSEYMERHTVSKLIGSPPGYVGYNEGGQLTEAVRRRPY 614
Query: 480 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 539
TV+LFDEIEKAHPDVFNM+LQILEDGRLTD+KGRTVDFKNTLLIMTSN+GS VIEKGG
Sbjct: 615 TVILFDEIEKAHPDVFNMLLQILEDGRLTDAKGRTVDFKNTLLIMTSNIGSKVIEKGGGG 674
Query: 540 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 599
+GF+ ++ +S YNRI+SLV EELK YFRPEFLNRLDE+IVF QLT+ EVKEIADIMLK
Sbjct: 675 LGFEFSENKTESQYNRIRSLVNEELKNYFRPEFLNRLDEIIVFHQLTRDEVKEIADIMLK 734
Query: 600 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 659
E+F RL + + L+VTERF++R+V+EGY+P+YGARPLRRAIMRLLED +AE++L+ +K+
Sbjct: 735 ELFKRLNDQGMSLEVTERFKDRLVQEGYSPAYGARPLRRAIMRLLEDVLAEEILSGRLKD 794
Query: 660 GDSVIVDVDSDGNVTV 675
G++ +VDV DG V V
Sbjct: 795 GNAAVVDVGEDGQVKV 810
>gi|409992273|ref|ZP_11275473.1| ATPase [Arthrospira platensis str. Paraca]
gi|291567174|dbj|BAI89446.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Arthrospira
platensis NIES-39]
gi|409936864|gb|EKN78328.1| ATPase [Arthrospira platensis str. Paraca]
Length = 823
Score = 1025 bits (2650), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 511/679 (75%), Positives = 594/679 (87%), Gaps = 8/679 (1%)
Query: 1 MVGESTEAVGAGVGGGSSG-NKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 59
M+GE+ E GGSSG K PTL+E+G+NLT++A EGKLDPVVGRQ +IERV+QILG
Sbjct: 141 MLGETAEVAA----GGSSGRTKTPTLDEFGSNLTQMASEGKLDPVVGRQKEIERVIQILG 196
Query: 60 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 119
RRTKNNP LIGEPGVGKTAIAEGLAQRIA D+PD +E K+V+TLD+GLLVAGTKYRGEF
Sbjct: 197 RRTKNNPVLIGEPGVGKTAIAEGLAQRIAQNDIPDILEDKRVVTLDIGLLVAGTKYRGEF 256
Query: 120 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 179
EERLKK+M+EI+ +IL IDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTL
Sbjct: 257 EERLKKIMDEIRSCGNVILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTL 316
Query: 180 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 239
DEYRKHIE+D ALERRFQPV V EPSV ETI+IL GLRERYE HHKL+ DEA+ +AA+L
Sbjct: 317 DEYRKHIERDAALERRFQPVMVGEPSVPETIEILYGLRERYEQHHKLKIIDEAIEAAAKL 376
Query: 240 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 299
S +YISDR+LPDKAIDLIDEAGSRVRL ++QLP A+EL+KELRQ+ KEK++AVR QDF+
Sbjct: 377 SDRYISDRYLPDKAIDLIDEAGSRVRLINSQLPPAAKELDKELRQVLKEKDDAVRSQDFD 436
Query: 300 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 359
+AGELRDREM++K+QI A+ K ++ + D P+VTE DI IV++WTGIPV K+
Sbjct: 437 RAGELRDREMEIKSQIRAIAQNKKSETRTDE---DDSPMVTEEDIAQIVASWTGIPVNKL 493
Query: 360 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 419
+ ES++LL ME+TLH+R+IGQ+EAVKA+SRAIRRARVGLKNPNRPIASFIFSGPTGVGK
Sbjct: 494 TESESEKLLHMEDTLHQRLIGQEEAVKAVSRAIRRARVGLKNPNRPIASFIFSGPTGVGK 553
Query: 420 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 479
+EL K+LAAY+FGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGY EGGQLTEAVRRRPY
Sbjct: 554 TELTKSLAAYFFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYNEGGQLTEAVRRRPY 613
Query: 480 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 539
TVVLFDEIEKAHPDVFNM+LQILEDGRLTD+KGRTVDFKNTL+IMTSN+GS VIEKGG
Sbjct: 614 TVVLFDEIEKAHPDVFNMLLQILEDGRLTDAKGRTVDFKNTLIIMTSNIGSKVIEKGGGG 673
Query: 540 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 599
+GF+ + ++ D+ YNRI++LV EELKQYFRPEFLNRLDE+IVFRQL K EVKEIA IML
Sbjct: 674 LGFEFEENQADAQYNRIRNLVNEELKQYFRPEFLNRLDEIIVFRQLNKDEVKEIAVIMLN 733
Query: 600 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 659
EVF RL K I L++T+RF+ER+VEEGYNPSYGARPLRRAIMRLLEDS+AE++L+ +KE
Sbjct: 734 EVFGRLTEKGIRLEITDRFKERLVEEGYNPSYGARPLRRAIMRLLEDSLAEEILSGRVKE 793
Query: 660 GDSVIVDVDSDGNVTVLNG 678
GD+ IVDV+ DG V VL G
Sbjct: 794 GDTAIVDVNEDGQVQVLQG 812
>gi|434403231|ref|YP_007146116.1| ATPase with chaperone activity, ATP-binding subunit
[Cylindrospermum stagnale PCC 7417]
gi|428257486|gb|AFZ23436.1| ATPase with chaperone activity, ATP-binding subunit
[Cylindrospermum stagnale PCC 7417]
Length = 823
Score = 1025 bits (2649), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 506/676 (74%), Positives = 590/676 (87%), Gaps = 9/676 (1%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
M+GE+ E GG S K PTL+E+G+NLT++A + KLDPVVGR +IERV+QILGR
Sbjct: 141 MLGETAEV---SPGGPSGRTKTPTLDEFGSNLTQMAVDNKLDPVVGRAKEIERVIQILGR 197
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNP LIGEPGVGKTAIAEGLA RIA+ DVPD +E K+V+TLD+GLLVAGTKYRGEFE
Sbjct: 198 RTKNNPVLIGEPGVGKTAIAEGLASRIANKDVPDILEDKRVVTLDIGLLVAGTKYRGEFE 257
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
ERLKK+M+EI+ + +IL IDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTLD
Sbjct: 258 ERLKKIMDEIRSAGNVILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLD 317
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRKHIE+D ALERRFQPV V EPSV ETI+IL GLRERYE HHKL+ +DEAL +AA+LS
Sbjct: 318 EYRKHIERDAALERRFQPVMVGEPSVAETIEILFGLRERYEQHHKLKISDEALEAAAKLS 377
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
+YISDRFLPDKAIDLIDEAGSRVRL ++QLP A+EL+KELRQI KEK++AVR QDF++
Sbjct: 378 DRYISDRFLPDKAIDLIDEAGSRVRLINSQLPPAAKELDKELRQILKEKDDAVRSQDFDR 437
Query: 301 AGELRDREMDLKAQISALVDKGKEMSKAETEAGD-VGPVVTEVDIQHIVSAWTGIPVEKV 359
AGELRDREM++KA+I A+ SK GD + PVVTE DI HIV++WTG+PV K+
Sbjct: 438 AGELRDREMEIKAEIRAIAQ-----SKTNASGGDGLEPVVTEEDIAHIVASWTGVPVNKL 492
Query: 360 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 419
+ ES++LL ME+TLH+R+IGQD+AVKA+SRAIRRARVGLKNPNRPIASF+FSGPTGVGK
Sbjct: 493 TESESEKLLHMEDTLHQRLIGQDDAVKAVSRAIRRARVGLKNPNRPIASFVFSGPTGVGK 552
Query: 420 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 479
+ELAK+LA+Y+FGSEEAMIRLDMSE+MERHTVSKLIGSPPGYVGY EGGQLTEAVRRRPY
Sbjct: 553 TELAKSLASYFFGSEEAMIRLDMSEYMERHTVSKLIGSPPGYVGYNEGGQLTEAVRRRPY 612
Query: 480 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 539
TVVLFDEIEKAHPDVFNM+LQILEDGRLTD+KGRTVDFKNTLLI+TSN+GS VIEKGG
Sbjct: 613 TVVLFDEIEKAHPDVFNMLLQILEDGRLTDAKGRTVDFKNTLLILTSNIGSKVIEKGGSG 672
Query: 540 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 599
IGF+ D +S+YNRI+SLV EELKQYFRPEFLNRLDE+IVFRQL+K EV +IA+IMLK
Sbjct: 673 IGFEFADDVTESAYNRIRSLVNEELKQYFRPEFLNRLDEIIVFRQLSKPEVTQIAEIMLK 732
Query: 600 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 659
EVF RL K I L+VT+RF++R+++EGY+PSYGARPLRRAIMRLLEDS+AE++L+ IK+
Sbjct: 733 EVFGRLTEKGITLEVTDRFKDRLIDEGYSPSYGARPLRRAIMRLLEDSLAEEILSGRIKD 792
Query: 660 GDSVIVDVDSDGNVTV 675
GD VDVD G V V
Sbjct: 793 GDIATVDVDETGTVRV 808
>gi|428778441|ref|YP_007170227.1| chaperone ATPase [Dactylococcopsis salina PCC 8305]
gi|428692720|gb|AFZ48870.1| ATPase with chaperone activity, ATP-binding subunit
[Dactylococcopsis salina PCC 8305]
Length = 823
Score = 1023 bits (2644), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 504/676 (74%), Positives = 587/676 (86%), Gaps = 7/676 (1%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
M+GE+ E GGG K PTL+E+G+NLT+LA + KLDPVVGRQ +IERV+QILGR
Sbjct: 141 MLGETAEVSS---GGGQGRTKTPTLDEFGSNLTQLAADSKLDPVVGRQNEIERVIQILGR 197
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNP LIGEPGVGKTAIAEGLAQRI + DVPD +E K+V+TLD+GLLVAGTKYRGEFE
Sbjct: 198 RTKNNPVLIGEPGVGKTAIAEGLAQRIGNEDVPDILENKRVVTLDIGLLVAGTKYRGEFE 257
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
ERLKK+M+EI+Q+ +IL IDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTLD
Sbjct: 258 ERLKKIMDEIRQAGNVILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLD 317
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRKHIE+D ALERRFQPV V EPSV+ET++IL GLR+RYE HHKLR TDEAL +AA+LS
Sbjct: 318 EYRKHIERDAALERRFQPVMVGEPSVEETVEILYGLRDRYEQHHKLRITDEALDAAAKLS 377
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
+YISDR LPDKAIDLIDEAGSRVRL ++QLP A+EL++ELRQ+ K+K++AVR QDF++
Sbjct: 378 DRYISDRQLPDKAIDLIDEAGSRVRLLNSQLPPAAKELDQELRQVLKQKDDAVRSQDFDR 437
Query: 301 AGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVS 360
AGELRDREM++K +I AL S E + G P+V +I HIVS+WTG+PV K++
Sbjct: 438 AGELRDREMEIKGEIRALASAKTAESNKEDQPG---PIVGVEEIAHIVSSWTGVPVSKIT 494
Query: 361 TDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 420
ES +LL +EETLH+R+IGQ+EAVK++SRAIRRARVGLKNPNRPIASFIFSGPTGVGK+
Sbjct: 495 ETESQKLLHLEETLHERLIGQEEAVKSVSRAIRRARVGLKNPNRPIASFIFSGPTGVGKT 554
Query: 421 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 480
EL K+LA+Y+FGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGY EGGQLTEAVRRRPYT
Sbjct: 555 ELTKSLASYFFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYNEGGQLTEAVRRRPYT 614
Query: 481 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI 540
VVLFDEIEKAHPDVFNM+LQILEDGRLTD+KGRTVDFKNTLLIMTSN+GS VIEKGG +
Sbjct: 615 VVLFDEIEKAHPDVFNMLLQILEDGRLTDAKGRTVDFKNTLLIMTSNIGSKVIEKGGGGL 674
Query: 541 GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 600
GF+LD D+ +S YNRI+SLV EELKQYFRPEFLNRLDE+IVFRQL + EVKEIA+IML+E
Sbjct: 675 GFELDQDQAESQYNRIRSLVNEELKQYFRPEFLNRLDEIIVFRQLNREEVKEIAEIMLRE 734
Query: 601 VFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEG 660
VF RL ++I L+VTE FRER+VEEGYNPSYGARPLRRAIMRLLED +AE++L+ + EG
Sbjct: 735 VFSRLTEQEINLEVTEAFRERLVEEGYNPSYGARPLRRAIMRLLEDILAEEILSGRLSEG 794
Query: 661 DSVIVDVDSDGNVTVL 676
D+ VDV +G V V
Sbjct: 795 DTATVDV-VEGEVKVF 809
>gi|427727388|ref|YP_007073625.1| chaperone ATPase [Nostoc sp. PCC 7524]
gi|427363307|gb|AFY46028.1| ATPase with chaperone activity, ATP-binding subunit [Nostoc sp. PCC
7524]
Length = 856
Score = 1022 bits (2643), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 511/676 (75%), Positives = 599/676 (88%), Gaps = 9/676 (1%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
M+GE+ E G G + K PTL+E+G+NLT++A + KLDPVVGR +IERV+QILGR
Sbjct: 174 MLGETAEVSATGSSGRT---KTPTLDEFGSNLTQMATDNKLDPVVGRAKEIERVIQILGR 230
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNP LIGEPGVGKTAIAEGLA RIA+ DVPD +E K+V+TLD+GLLVAGTKYRGEFE
Sbjct: 231 RTKNNPVLIGEPGVGKTAIAEGLASRIANKDVPDILEDKRVVTLDIGLLVAGTKYRGEFE 290
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
ERLKK+M+EI+Q+ +IL IDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTLD
Sbjct: 291 ERLKKIMDEIRQAGNVILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLD 350
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRKHIE+D ALERRFQPV V EPSVDETI+IL GLR+RYE HHKL+ +DEALV+AA+LS
Sbjct: 351 EYRKHIERDAALERRFQPVMVGEPSVDETIEILYGLRDRYEQHHKLKISDEALVAAAKLS 410
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
+YISDR+LPDKAIDLIDEAGSRVRL ++QLP A+EL+KELRQI KEK++AVR QDF++
Sbjct: 411 DRYISDRYLPDKAIDLIDEAGSRVRLINSQLPPAAKELDKELRQILKEKDDAVRSQDFDR 470
Query: 301 AGELRDREMDLKAQISALVDKGKEMSKAETEAGD-VGPVVTEVDIQHIVSAWTGIPVEKV 359
AGELRDREM++KA+I A+ SKA +GD V PVVTE DI HIV++WTG+PV K+
Sbjct: 471 AGELRDREMEIKAEIRAIA-----QSKANGASGDGVEPVVTEEDIAHIVASWTGVPVNKL 525
Query: 360 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 419
+ ES++LL ME+TLH+R+IGQ++AVKA+SRAIRRARVGLKNPNRPIASFIFSGPTGVGK
Sbjct: 526 TESESEKLLHMEDTLHQRLIGQEDAVKAVSRAIRRARVGLKNPNRPIASFIFSGPTGVGK 585
Query: 420 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 479
+ELAK+LA+Y+FGSEEAMIRLDMSE+MERHTVSKLIGSPPGYVGY EGGQLTEAVRRRPY
Sbjct: 586 TELAKSLASYFFGSEEAMIRLDMSEYMERHTVSKLIGSPPGYVGYNEGGQLTEAVRRRPY 645
Query: 480 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 539
TVVLFDEIEKAHPDVFNM+LQILEDGRLTD+KGRTVDFKNTLLI+TSN+GS VIEKGG
Sbjct: 646 TVVLFDEIEKAHPDVFNMLLQILEDGRLTDAKGRTVDFKNTLLILTSNIGSKVIEKGGGG 705
Query: 540 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 599
IGF+ D+ +S YNRIK+LV EELKQYFRPEFLNRLDE+IVFRQL+KLEV EIADIMLK
Sbjct: 706 IGFEFGEDQSESQYNRIKNLVNEELKQYFRPEFLNRLDEIIVFRQLSKLEVTEIADIMLK 765
Query: 600 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 659
EVF RL K I L+V++RF++R+++EGY+PSYGARPLRRAIMRLLEDS+AE++L+ IK+
Sbjct: 766 EVFGRLTEKGITLEVSDRFKDRLIQEGYSPSYGARPLRRAIMRLLEDSLAEEILSGRIKD 825
Query: 660 GDSVIVDVDSDGNVTV 675
GD +VDVD +GNV V
Sbjct: 826 GDVALVDVDENGNVQV 841
>gi|307154665|ref|YP_003890049.1| ATPase AAA-2 domain-containing protein [Cyanothece sp. PCC 7822]
gi|306984893|gb|ADN16774.1| ATPase AAA-2 domain protein [Cyanothece sp. PCC 7822]
Length = 821
Score = 1022 bits (2643), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 501/679 (73%), Positives = 599/679 (88%), Gaps = 10/679 (1%)
Query: 1 MVGESTEAVGAGVGGGSSG-NKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 59
M+GE+ E GG ++G NK PTL+E+G+NLT++A EGKLDPVVGRQ +IERV+QILG
Sbjct: 141 MLGETAEVAA---GGPTTGRNKTPTLDEFGSNLTQMAAEGKLDPVVGRQKEIERVIQILG 197
Query: 60 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 119
RRTKNNP LIGEPGVGKTAIAEGLAQRIA+ D+PD +E K+V+TLD+GLLVAGTKYRGEF
Sbjct: 198 RRTKNNPVLIGEPGVGKTAIAEGLAQRIATKDIPDILEEKRVVTLDIGLLVAGTKYRGEF 257
Query: 120 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 179
EERLKK+M+EI+Q+ +IL IDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTL
Sbjct: 258 EERLKKIMDEIRQAGNVILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTL 317
Query: 180 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 239
DEYRKHIE+D ALERRFQPV V EP+VDETI+IL GLRERYE HHKL+ DEAL +AA+L
Sbjct: 318 DEYRKHIERDAALERRFQPVMVGEPTVDETIEILYGLRERYEQHHKLKILDEALEAAAKL 377
Query: 240 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 299
S +YISDR+LPDKAIDLIDEAGSRVRL +QLP A+EL+KELRQ+ K+K++AVR QDF+
Sbjct: 378 SDRYISDRYLPDKAIDLIDEAGSRVRLITSQLPPAAKELDKELRQVLKQKDDAVRSQDFD 437
Query: 300 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 359
+AGELRDREM++KA+I A+ S +TE P V +I +IV++WTGIPV K+
Sbjct: 438 RAGELRDREMEIKAEIRAIA------SAKKTEGESDEPSVDAEEIANIVASWTGIPVNKL 491
Query: 360 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 419
+ ES++LL ME+TLH+R+IGQ++AVKA+SRAIRRARVGLKNPNRPIASF+FSGPTGVGK
Sbjct: 492 TETESEKLLHMEDTLHQRLIGQEDAVKAVSRAIRRARVGLKNPNRPIASFVFSGPTGVGK 551
Query: 420 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 479
+EL KALAAY+FGSE+AMIRLDMSEFMERHTVSKLIGSPPGYVGY EGGQLTEAVRRRPY
Sbjct: 552 TELTKALAAYFFGSEDAMIRLDMSEFMERHTVSKLIGSPPGYVGYNEGGQLTEAVRRRPY 611
Query: 480 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 539
TVVLFDEIEKAHPDVFN++LQILEDGRLTD+KGRTVDFKNTLLIMTSN+GS VIEKGG
Sbjct: 612 TVVLFDEIEKAHPDVFNILLQILEDGRLTDAKGRTVDFKNTLLIMTSNIGSKVIEKGGGG 671
Query: 540 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 599
+GF+ + D+ ++ YNRI+SLV EELKQYFRPEFLNRLDE+IVFRQL++ EVKEIADI+LK
Sbjct: 672 LGFEFEADQAEAQYNRIRSLVNEELKQYFRPEFLNRLDEIIVFRQLSRDEVKEIADILLK 731
Query: 600 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 659
EVF RL K I L+VT++F++R+VEEGYNP+YGARPLRRAIMRLLED +AE++L+ ++K+
Sbjct: 732 EVFSRLTEKGITLEVTQKFKDRLVEEGYNPAYGARPLRRAIMRLLEDVLAEEILSGQVKD 791
Query: 660 GDSVIVDVDSDGNVTVLNG 678
GD+ I D+DS+G V +++G
Sbjct: 792 GDTAIADIDSEGKVKIIHG 810
>gi|78779482|ref|YP_397594.1| Clp protease ATP-binding subunit [Prochlorococcus marinus str. MIT
9312]
gi|78712981|gb|ABB50158.1| ATPase [Prochlorococcus marinus str. MIT 9312]
Length = 842
Score = 1022 bits (2642), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 502/699 (71%), Positives = 597/699 (85%), Gaps = 13/699 (1%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
M+GE+ E VG+G K TL+E+GTNLTKLA E KLDPVVGR +I+RVVQILGR
Sbjct: 141 MLGETAE-VGSGANSSKGNLKTATLDEFGTNLTKLASESKLDPVVGRYAEIDRVVQILGR 199
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNP LIGEPGVGKTAIAEGLAQRI GD+PD +E K+V+TLD+GLLVAGTKYRGEFE
Sbjct: 200 RTKNNPVLIGEPGVGKTAIAEGLAQRIQLGDIPDILEDKRVLTLDIGLLVAGTKYRGEFE 259
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
ERLKK+MEEIK + +IL IDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTLD
Sbjct: 260 ERLKKIMEEIKSAGNVILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLD 319
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRKHIE+D ALERRFQPV V EPS+++TI+ILKGLRERYE HH+L+ TDEAL +AA L
Sbjct: 320 EYRKHIERDAALERRFQPVMVGEPSIEDTIEILKGLRERYEQHHRLKITDEALEAAAHLG 379
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
+YISDRFLPDKAIDLIDEAGSRVRL +++LP EA++++KELRQI K+K E+VR Q+F++
Sbjct: 380 DRYISDRFLPDKAIDLIDEAGSRVRLINSKLPPEAKQIDKELRQIQKQKEESVRDQNFDQ 439
Query: 301 AGELRDREMDLKAQISALVDKGKEMSKAETEAGDV-----------GPVVTEVDIQHIVS 349
AG+LR++E++L A+I +++ KE + + + D P+V E D+ HIV+
Sbjct: 440 AGQLREKEIELSAKIKEVLENKKESTTEDESSVDTNSVKNDSKLLQNPMVNEEDVAHIVA 499
Query: 350 AWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASF 409
+WTG+PV+K++ ES +LL MEETLH+R+IGQDEAVKA+SRAIRRARVGLKNPNRPIASF
Sbjct: 500 SWTGVPVQKLTETESVKLLNMEETLHQRLIGQDEAVKAVSRAIRRARVGLKNPNRPIASF 559
Query: 410 IFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQ 469
IFSGPTGVGK+EL K+LA+Y+FGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVG+ EGGQ
Sbjct: 560 IFSGPTGVGKTELTKSLASYFFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGFNEGGQ 619
Query: 470 LTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVG 529
LTEAVRRRPYTVVLFDE+EKAHPDVFN++LQ+LEDGRLTDSKGRTVDFKNTLLIMTSN+G
Sbjct: 620 LTEAVRRRPYTVVLFDEVEKAHPDVFNLLLQLLEDGRLTDSKGRTVDFKNTLLIMTSNIG 679
Query: 530 SSVIEKGGRRIGFDLDYDE-KDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKL 588
S VIEKGG +GF+ D +DS YNRIKSLV EELKQYFRPEFLNRLDE+IVFRQL+K
Sbjct: 680 SKVIEKGGGGLGFEFSGDSVEDSQYNRIKSLVNEELKQYFRPEFLNRLDEIIVFRQLSKN 739
Query: 589 EVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSM 648
EVKEIA+IML+EVF RL+ K I+L VT+ F+ER+VEEGYNPSYGARPLRRA+MRLLEDS+
Sbjct: 740 EVKEIAEIMLQEVFARLEDKGIKLSVTDAFKERLVEEGYNPSYGARPLRRAVMRLLEDSL 799
Query: 649 AEKMLAREIKEGDSVIVDVDSDGNVTVLNGSSGAPESLA 687
AE++L+ IK+GD +VD+D + VT+ S + + LA
Sbjct: 800 AEEVLSGRIKDGDKALVDIDDNKKVTINISSEESSQELA 838
>gi|81299071|ref|YP_399279.1| ATPase [Synechococcus elongatus PCC 7942]
gi|81167952|gb|ABB56292.1| ATPase [Synechococcus elongatus PCC 7942]
Length = 824
Score = 1021 bits (2641), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 505/677 (74%), Positives = 590/677 (87%), Gaps = 7/677 (1%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
M+GE+ E GGG K PTL+E+G+NLT+ A +GKLDPVVGRQ +IERV+QILGR
Sbjct: 141 MLGETAEV---STGGGQGRTKTPTLDEFGSNLTQQAADGKLDPVVGRQKEIERVIQILGR 197
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNP LIGEPGVGKTAIAEGLAQRIA+GD+PD +E K+V+TLD+GLLVAGTKYRGEFE
Sbjct: 198 RTKNNPVLIGEPGVGKTAIAEGLAQRIATGDIPDILEDKRVVTLDIGLLVAGTKYRGEFE 257
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
ERLKK+M+EI+ + +IL IDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTLD
Sbjct: 258 ERLKKIMDEIRSAGNVILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLD 317
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRKHIE+D ALERRFQPV V EPSVD+TI+IL+GLRERYE HHKL+ DEAL +AA+L+
Sbjct: 318 EYRKHIERDAALERRFQPVMVGEPSVDDTIEILRGLRERYEQHHKLKIADEALEAAAKLA 377
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
+YISDRFLPDKAIDLIDEAGSRVRL ++QLP A+EL+KELRQ+ K+K++AVR QDF+K
Sbjct: 378 DRYISDRFLPDKAIDLIDEAGSRVRLMNSQLPPAAKELDKELRQVLKDKDDAVRSQDFDK 437
Query: 301 AGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVS 360
AGELRDREM++K QI ++ K + T D P+VTE DI HIV++WTG+PV K++
Sbjct: 438 AGELRDREMEIKTQIRSIAQSKKADGTSST---DDSPIVTEEDIAHIVASWTGVPVNKLT 494
Query: 361 TDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 420
ES +LL MEETLH R+IGQDEAVKA+SRAIRRARVGLKNPNRPIASFIFSGPTGVGK+
Sbjct: 495 ESESTKLLNMEETLHSRLIGQDEAVKAVSRAIRRARVGLKNPNRPIASFIFSGPTGVGKT 554
Query: 421 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 480
EL KALAAY+FGSEEAMIRLDMSE+MERHTVSKLIGSPPGYVGY EGGQLTEAVRRRPYT
Sbjct: 555 ELTKALAAYFFGSEEAMIRLDMSEYMERHTVSKLIGSPPGYVGYNEGGQLTEAVRRRPYT 614
Query: 481 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI 540
VVL DEIEKAHPDVFN++LQ+LEDGRLTD+KGRTVDFKNTL+I+TSN+GS VIEKGG +
Sbjct: 615 VVLLDEIEKAHPDVFNLLLQLLEDGRLTDAKGRTVDFKNTLIILTSNIGSKVIEKGGGGL 674
Query: 541 GFDLD-YDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 599
GF+ DE ++ YNRI+SLV EELKQYFRPEFLNRLDE+IVFRQL K EVKEIADIML+
Sbjct: 675 GFEFSGVDEAENQYNRIRSLVNEELKQYFRPEFLNRLDEIIVFRQLNKEEVKEIADIMLR 734
Query: 600 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 659
EVF R+ K I L VTE+F++R+VEEGYNPSYGARPLRRAIMRLLEDS+AE+ L+ +++E
Sbjct: 735 EVFGRMLEKGISLSVTEKFKDRLVEEGYNPSYGARPLRRAIMRLLEDSLAEEFLSGKLRE 794
Query: 660 GDSVIVDVDSDGNVTVL 676
GD+ +VD+ +G V VL
Sbjct: 795 GDTAVVDIGEEGKVQVL 811
>gi|427420614|ref|ZP_18910797.1| ATPase with chaperone activity, ATP-binding subunit [Leptolyngbya
sp. PCC 7375]
gi|425756491|gb|EKU97345.1| ATPase with chaperone activity, ATP-binding subunit [Leptolyngbya
sp. PCC 7375]
Length = 822
Score = 1020 bits (2638), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 508/676 (75%), Positives = 594/676 (87%), Gaps = 9/676 (1%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
M+GE+ E GG K PTL+E+G+NLT++A EGKLDPVVGRQ +IERV+QILGR
Sbjct: 141 MLGETAEV---STGGSQGRTKTPTLDEFGSNLTQMASEGKLDPVVGRQKEIERVIQILGR 197
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNP LIGEPGVGKTAIAEGLAQRIA+GD+PD +E K+V+TLD+GLLVAGTKYRGEFE
Sbjct: 198 RTKNNPVLIGEPGVGKTAIAEGLAQRIANGDIPDILEEKRVVTLDIGLLVAGTKYRGEFE 257
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
ERLKK+M+EI+ + +IL IDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTLD
Sbjct: 258 ERLKKIMDEIRSAANVILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLD 317
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRKHIE+D ALERRFQPV V EPSV+ETI+IL GLR+RYE HHKL+ DE+L +AA+L+
Sbjct: 318 EYRKHIERDAALERRFQPVMVGEPSVEETIEILHGLRDRYEQHHKLKILDESLEAAAKLA 377
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
+YISDRFLPDKAIDLIDEAGSRVRL ++QLP A+EL++ELR + K+K+ AVR QDF+K
Sbjct: 378 DRYISDRFLPDKAIDLIDEAGSRVRLINSQLPPAAKELDRELRSVLKDKDNAVRSQDFDK 437
Query: 301 AGELRDREMDLKAQISALVDKGKEMSKAETEAGDV-GPVVTEVDIQHIVSAWTGIPVEKV 359
AGELRDREM++KA+I A+ SK EAG P VTE DI HIV++WTG+PV K+
Sbjct: 438 AGELRDREMEIKAEIRAIAQ-----SKRTDEAGSSDSPEVTEEDIAHIVASWTGVPVNKL 492
Query: 360 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 419
+ ES++LL ME+TLH+RVIGQDEAVKAISRAIRRARVGLKNPNRPIASF+FSGPTGVGK
Sbjct: 493 TETESEKLLHMEDTLHQRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFVFSGPTGVGK 552
Query: 420 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 479
+EL KALAAY+FGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGY+EGGQLTEAVRRRPY
Sbjct: 553 TELTKALAAYFFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYSEGGQLTEAVRRRPY 612
Query: 480 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 539
TVVLFDEIEKAHPDVFNM+LQILEDGRLTD+KGRTVDFKNTLLI+TSN+GS VIEKGG
Sbjct: 613 TVVLFDEIEKAHPDVFNMLLQILEDGRLTDAKGRTVDFKNTLLILTSNIGSKVIEKGGGG 672
Query: 540 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 599
+GF+L+ D +S YNRI+SLV EELKQYFRPEFLNRLDE+IVFRQLTK EVKEI+DI+LK
Sbjct: 673 LGFELEEDAAESQYNRIRSLVNEELKQYFRPEFLNRLDEIIVFRQLTKPEVKEISDILLK 732
Query: 600 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 659
EVF RL + I L+VT++F+ER+VEEGYNPSYGARPLRRAIMRLLED++AE++L+ +++
Sbjct: 733 EVFGRLTEQGITLEVTDKFKERLVEEGYNPSYGARPLRRAIMRLLEDTLAEEILSSRLRD 792
Query: 660 GDSVIVDVDSDGNVTV 675
GD+ +VDVD G V +
Sbjct: 793 GDTAVVDVDEKGKVII 808
>gi|123966412|ref|YP_001011493.1| ClpC [Prochlorococcus marinus str. MIT 9515]
gi|123200778|gb|ABM72386.1| ClpC [Prochlorococcus marinus str. MIT 9515]
Length = 843
Score = 1020 bits (2637), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 504/700 (72%), Positives = 601/700 (85%), Gaps = 14/700 (2%)
Query: 1 MVGESTEAVGAGVGGGSSGN-KMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 59
M+GE+ + VG G + GN K TL+E+GTNLTKLA E KLDPVVGR +I+RV+QILG
Sbjct: 141 MLGETAD-VGTGGTSSNKGNLKTATLDEFGTNLTKLASESKLDPVVGRYEEIDRVIQILG 199
Query: 60 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 119
RRTKNNP LIGEPGVGKTAIAEGLAQRI G++PD +E K+V+TLD+GLLVAGTKYRGEF
Sbjct: 200 RRTKNNPVLIGEPGVGKTAIAEGLAQRIQLGEIPDILEDKRVLTLDIGLLVAGTKYRGEF 259
Query: 120 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 179
EERLKK+MEEIK + +IL IDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTL
Sbjct: 260 EERLKKIMEEIKSAGNVILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTL 319
Query: 180 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 239
DEYRKHIE+D ALERRFQPV V EPS+++TI+ILKGLRERYE HH+L+ TD+AL +AA L
Sbjct: 320 DEYRKHIERDAALERRFQPVMVGEPSIEDTIEILKGLRERYEQHHRLKITDDALEAAAHL 379
Query: 240 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 299
+YISDRFLPDKAIDLIDEAGSRVRL +++LP EA++++KELRQ+ K+K E+VR Q+F+
Sbjct: 380 GDRYISDRFLPDKAIDLIDEAGSRVRLINSKLPPEAKQIDKELRQVQKQKEESVRDQNFD 439
Query: 300 KAGELRDREMDLKAQISALVDKGKE-------MSKAETEAGDV----GPVVTEVDIQHIV 348
+AG+LR++E++L +I L+D KE + +ETE G + P+V+E D+ HIV
Sbjct: 440 QAGQLREKEIELSEKIKELLDSKKESLDKNNSSNASETEDGGIDITQNPLVSEEDVAHIV 499
Query: 349 SAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIAS 408
++WTG+PV+K++ ES +LL MEETLH+R+IGQDEAVKA+S+AIRRARVGLKNPNRPIAS
Sbjct: 500 ASWTGVPVQKLTETESVKLLNMEETLHQRLIGQDEAVKAVSKAIRRARVGLKNPNRPIAS 559
Query: 409 FIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGG 468
FIFSGPTGVGK+EL K+LA+Y+FGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVG+ EGG
Sbjct: 560 FIFSGPTGVGKTELTKSLASYFFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGFNEGG 619
Query: 469 QLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNV 528
QLTEAVRRRPYTVVLFDE+EKAHPDVFN++LQ+LEDGRLTDSKGRTVDFKNTLLIMTSN+
Sbjct: 620 QLTEAVRRRPYTVVLFDEVEKAHPDVFNLLLQLLEDGRLTDSKGRTVDFKNTLLIMTSNI 679
Query: 529 GSSVIEKGGRRIGFDLDYDE-KDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTK 587
GS VIEKGG +GF+ D +DS YNRIKSLV EELKQYFRPEFLNRLDE+IVFRQLTK
Sbjct: 680 GSKVIEKGGGGLGFEFSGDSVEDSQYNRIKSLVNEELKQYFRPEFLNRLDEIIVFRQLTK 739
Query: 588 LEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDS 647
EVK+IA+IMLKEVF RL K I+L VTE F+ER+VEEGYNP+YGARPLRRA+MRLLEDS
Sbjct: 740 NEVKDIAEIMLKEVFSRLNEKGIKLDVTEAFKERLVEEGYNPAYGARPLRRAVMRLLEDS 799
Query: 648 MAEKMLAREIKEGDSVIVDVDSDGNVTVLNGSSGAPESLA 687
+AE++L+ IK+GD +VD+D + VTV S + + LA
Sbjct: 800 LAEEVLSGRIKDGDKALVDIDENKKVTVNISSEESSQELA 839
>gi|254422552|ref|ZP_05036270.1| ATPase, AAA family [Synechococcus sp. PCC 7335]
gi|196190041|gb|EDX85005.1| ATPase, AAA family [Synechococcus sp. PCC 7335]
Length = 826
Score = 1019 bits (2635), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 500/675 (74%), Positives = 592/675 (87%), Gaps = 4/675 (0%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
M+GE+ E G+ G + K PTL+E+G NLT++A +GKLDPVVGRQ +IERV+QILGR
Sbjct: 141 MLGETAEVSGSTSSQGRT--KTPTLDEFGANLTQMAADGKLDPVVGRQKEIERVIQILGR 198
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNP LIGEPGVGKTAIAEGLAQRI + D+PD +E K+V+TLD+GLLVAGTKYRGEFE
Sbjct: 199 RTKNNPVLIGEPGVGKTAIAEGLAQRIGNNDIPDILEDKRVVTLDIGLLVAGTKYRGEFE 258
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
ERLKK+MEEI+ + +IL IDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTLD
Sbjct: 259 ERLKKIMEEIRAAANVILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLD 318
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRKHIE+D ALERRFQPV V EPSVDETI+IL GLR+RYE HHKL+ D+AL +AA+LS
Sbjct: 319 EYRKHIERDAALERRFQPVMVGEPSVDETIEILHGLRDRYEQHHKLKILDDALDAAAKLS 378
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
+YISDR+LPDKAIDLIDEAGSRVRL ++QLP A+EL+KELRQ+ K+K+ AVR QDF+K
Sbjct: 379 DRYISDRYLPDKAIDLIDEAGSRVRLLNSQLPPAAKELDKELRQVLKDKDNAVRSQDFDK 438
Query: 301 AGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVS 360
AGELRDREM++K +I + + K+ AE D P VTE DI HIV++WTG+PV K++
Sbjct: 439 AGELRDREMEIKTEIRTIA-QTKKAEDAEDAKAD-SPKVTEEDIAHIVASWTGVPVNKLT 496
Query: 361 TDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 420
ES++LL ME+ LH+R+IGQDEAV+AISRAIRRARVGLK+PNRPIASF+FSGPTGVGK+
Sbjct: 497 ESESEKLLHMEDVLHQRLIGQDEAVRAISRAIRRARVGLKSPNRPIASFVFSGPTGVGKT 556
Query: 421 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 480
ELAK+LA Y+FG+EEAMIRLDMSEFMERHTVSKLIGSPPGYVGY EGGQLTEAVRRRPYT
Sbjct: 557 ELAKSLATYFFGAEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYNEGGQLTEAVRRRPYT 616
Query: 481 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI 540
VVLFDEIEKAHPDVFNM+LQILEDGRLTD+KGRTVDFKNTLLI+TSN+GS VIEKGG +
Sbjct: 617 VVLFDEIEKAHPDVFNMLLQILEDGRLTDAKGRTVDFKNTLLILTSNIGSKVIEKGGGGL 676
Query: 541 GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 600
GF+L+ D+ +S YNRI+SLV EELKQYFRPEFLNRLDE+IVFRQLTK EVKEI+ I+LKE
Sbjct: 677 GFELEADQAESQYNRIRSLVNEELKQYFRPEFLNRLDEIIVFRQLTKDEVKEISVILLKE 736
Query: 601 VFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEG 660
VF RL+ + I L+VT++F++R+VEEGYNPSYGARPLRRAIMRLLEDS+AE++L+ I++G
Sbjct: 737 VFSRLEEQGITLEVTDKFKDRLVEEGYNPSYGARPLRRAIMRLLEDSLAEEILSGRIQDG 796
Query: 661 DSVIVDVDSDGNVTV 675
D+ +VDV DG + V
Sbjct: 797 DTAVVDVGEDGKIVV 811
>gi|123968727|ref|YP_001009585.1| ClpC [Prochlorococcus marinus str. AS9601]
gi|123198837|gb|ABM70478.1| ClpC [Prochlorococcus marinus str. AS9601]
Length = 842
Score = 1018 bits (2633), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 499/699 (71%), Positives = 598/699 (85%), Gaps = 13/699 (1%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
M+GE+ E VG+G S K TL+E+GTNLTKLA E KLDPVVGR +I+RVVQILGR
Sbjct: 141 MLGETAE-VGSGTSTTKSNQKTATLDEFGTNLTKLASESKLDPVVGRYSEIDRVVQILGR 199
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNP LIGEPGVGKTAIAEGLAQRI +GD+PD +E K+V+TLD+GLLVAGTKYRGEFE
Sbjct: 200 RTKNNPVLIGEPGVGKTAIAEGLAQRIQTGDIPDILEDKRVLTLDIGLLVAGTKYRGEFE 259
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
ERLKK+MEEIK + +IL IDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTLD
Sbjct: 260 ERLKKIMEEIKSAGNVILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLD 319
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRKHIE+D ALERRFQPV V EPS+++TI+ILKGLRERYE HH+L+ TD+AL +AA L
Sbjct: 320 EYRKHIERDAALERRFQPVMVGEPSIEDTIEILKGLRERYEQHHRLKITDDALEAAAHLG 379
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
+YISDR+LPDKAIDLIDEAGSRVRL +++LP EA++++KELRQ+ K+K E+VR Q+F++
Sbjct: 380 DRYISDRYLPDKAIDLIDEAGSRVRLINSKLPPEAKQIDKELRQVQKQKEESVRDQNFDQ 439
Query: 301 AGELRDREMDLKAQISALVDKGKEMSKAETEAGD-----------VGPVVTEVDIQHIVS 349
AG+LR++E++L A+I +++ KE ++ + D P+V+E D+ HIV+
Sbjct: 440 AGQLREKEIELSAKIKEVLENKKESAEEDQFNDDNKSVESDSKLYQSPLVSEEDVAHIVA 499
Query: 350 AWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASF 409
+WTG+PV+K++ ES +LL MEETLH+R+IGQDEAVKA+SRAIRRARVGLKNPNRPIASF
Sbjct: 500 SWTGVPVQKLTETESVKLLNMEETLHQRLIGQDEAVKAVSRAIRRARVGLKNPNRPIASF 559
Query: 410 IFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQ 469
IFSGPTGVGK+EL K+LA+Y+FGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVG+ EGGQ
Sbjct: 560 IFSGPTGVGKTELTKSLASYFFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGFNEGGQ 619
Query: 470 LTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVG 529
LTEAVRRRPYTVVLFDE+EKAHPDVFN++LQ+LEDGRLTDSKGRTVDFKNTLLIMTSN+G
Sbjct: 620 LTEAVRRRPYTVVLFDEVEKAHPDVFNLLLQLLEDGRLTDSKGRTVDFKNTLLIMTSNIG 679
Query: 530 SSVIEKGGRRIGFDLDYDE-KDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKL 588
S VIEKGG +GF+ D +DS YNRIKSLV EELKQYFRPEFLNRLDE+IVFRQLTK
Sbjct: 680 SKVIEKGGGGLGFEFSGDSVEDSQYNRIKSLVNEELKQYFRPEFLNRLDEIIVFRQLTKN 739
Query: 589 EVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSM 648
EVK IA+IML+EVF RL+ K I+L VT+ F+ER+VEEGYNPSYGARPLRRA+MRLLEDS+
Sbjct: 740 EVKHIAEIMLQEVFARLQDKGIKLDVTDAFKERLVEEGYNPSYGARPLRRAVMRLLEDSL 799
Query: 649 AEKMLAREIKEGDSVIVDVDSDGNVTVLNGSSGAPESLA 687
AE++L+ IK+GD +VD+D + V + S + + LA
Sbjct: 800 AEEVLSGRIKDGDKALVDIDDNKKVIINISSEESSQELA 838
>gi|428219225|ref|YP_007103690.1| ATPase [Pseudanabaena sp. PCC 7367]
gi|427991007|gb|AFY71262.1| ATPase AAA-2 domain protein [Pseudanabaena sp. PCC 7367]
Length = 831
Score = 1018 bits (2633), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 501/676 (74%), Positives = 587/676 (86%), Gaps = 9/676 (1%)
Query: 1 MVGESTEAVGAGVGGGSSG-NKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 59
M+GE+ E GGS G K PTL+E+G+NLT++A EGKLDPVVGRQ +IERV+QILG
Sbjct: 141 MLGETAEVPS----GGSQGRTKTPTLDEFGSNLTQMASEGKLDPVVGRQKEIERVIQILG 196
Query: 60 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 119
RRTKNNP LIGEPGVGKTAIAEGLAQRI DVPD ++ K+V+TLD+GLLVAGTKYRGEF
Sbjct: 197 RRTKNNPVLIGEPGVGKTAIAEGLAQRINDTDVPDILQEKRVVTLDIGLLVAGTKYRGEF 256
Query: 120 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 179
EERLKK+M+EI+ + +IL IDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTL
Sbjct: 257 EERLKKIMDEIRSASNVILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTL 316
Query: 180 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 239
DEYRKHIE+D ALERRFQPV V EPSV ETI+IL GLRERYE HHKL+ +D+AL +AA+L
Sbjct: 317 DEYRKHIERDAALERRFQPVYVGEPSVAETIEILYGLRERYEQHHKLKISDDALEAAAKL 376
Query: 240 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 299
S +YISDR+LPDKAIDLIDEAGSRVRL ++QLP A+EL+KELRQ+ KEK EA R Q+F+
Sbjct: 377 SDRYISDRYLPDKAIDLIDEAGSRVRLINSQLPPAAKELDKELRQVVKEKEEAARAQEFD 436
Query: 300 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 359
KAGELRDREM++K +I ++ + K+E +V PVV E DI +IVS+WTG+PV K+
Sbjct: 437 KAGELRDREMEIKQEIRSIT----QAKKSEETGEEVSPVVDEEDIAYIVSSWTGVPVSKL 492
Query: 360 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 419
+ ES +L++ME+TLH+R+IGQ+EAVKAISRAIRRARVGLK+P+RPIASFIFSGPTGVGK
Sbjct: 493 TESESAKLMQMEDTLHQRIIGQEEAVKAISRAIRRARVGLKSPDRPIASFIFSGPTGVGK 552
Query: 420 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 479
+EL KALA Y+FGSE+AMIRLDMSEFMERHTVSKLIGSPPGYVGY EGGQLTEAVRRRPY
Sbjct: 553 TELTKALATYFFGSEDAMIRLDMSEFMERHTVSKLIGSPPGYVGYNEGGQLTEAVRRRPY 612
Query: 480 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 539
TVVLFDEIEKAHPDVFN++LQILEDGRLTDSKGRTVDFKNTLLIMTSN+GS VIEKG
Sbjct: 613 TVVLFDEIEKAHPDVFNLLLQILEDGRLTDSKGRTVDFKNTLLIMTSNIGSKVIEKGAIT 672
Query: 540 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 599
+GFD+ DE++S Y RI+SLV EELKQYFRPEFLNRLDE+IVFRQLTK EVKEIA+++LK
Sbjct: 673 LGFDIAEDEEESKYQRIRSLVNEELKQYFRPEFLNRLDEIIVFRQLTKDEVKEIANLLLK 732
Query: 600 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 659
EVF RL+ KDIEL VT +F +R+VEEGYNPSYGARPLRRAIMRLLEDS+AE++L +++
Sbjct: 733 EVFVRLREKDIELSVTTKFMDRLVEEGYNPSYGARPLRRAIMRLLEDSLAEEILTGKVRA 792
Query: 660 GDSVIVDVDSDGNVTV 675
G +V +DVD D +
Sbjct: 793 GAAVEMDVDDDNKIVC 808
>gi|119512929|ref|ZP_01631992.1| endopeptidase Clp ATP-binding chain [Nodularia spumigena CCY9414]
gi|119462425|gb|EAW43399.1| endopeptidase Clp ATP-binding chain [Nodularia spumigena CCY9414]
Length = 823
Score = 1018 bits (2632), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 502/675 (74%), Positives = 591/675 (87%), Gaps = 7/675 (1%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
M+GE+ E G G + K PTL+E+G+NLT++A + KLDPVVGR +IERV+QILGR
Sbjct: 141 MLGETAEVSATGPSGRT---KTPTLDEFGSNLTQMAVDNKLDPVVGRAKEIERVIQILGR 197
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNP LIGEPGVGKTAIAEGLA RIA+ D+PD +E K+V+TLD+GLLVAGTKYRGEFE
Sbjct: 198 RTKNNPVLIGEPGVGKTAIAEGLASRIANKDIPDILEDKRVVTLDIGLLVAGTKYRGEFE 257
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
ERLKK+M+EI+ + +IL IDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTLD
Sbjct: 258 ERLKKIMDEIRSAGNVILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLD 317
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRKHIE+D ALERRFQPV V EPSVDETI+IL GLRERYE HHKL+ +DEALV+AA+LS
Sbjct: 318 EYRKHIERDAALERRFQPVMVGEPSVDETIEILHGLRERYEQHHKLKISDEALVAAAKLS 377
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
+YISDR+LPDKAIDLIDEAGSRVRL ++QLP A+EL+KELRQI KEK++AVRGQDF+K
Sbjct: 378 DRYISDRYLPDKAIDLIDEAGSRVRLMNSQLPPAAKELDKELRQILKEKDDAVRGQDFDK 437
Query: 301 AGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVS 360
AGELRDREM++K +I A+ + + T PVV E DI HIV++WTG+PV K++
Sbjct: 438 AGELRDREMEIKGEIRAIA----QSKTSATGTEGEEPVVGEEDIAHIVASWTGVPVNKLT 493
Query: 361 TDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 420
ES++LL ME+TLH+R+IGQ++AVKA+SRAIRRARVGLKNPNRPIASF+FSGPTGVGK+
Sbjct: 494 ESESEKLLHMEDTLHQRLIGQEDAVKAVSRAIRRARVGLKNPNRPIASFVFSGPTGVGKT 553
Query: 421 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 480
ELAK+LA+Y+FGSEEAMIRLDMSE+MERHTVSKLIGSPPGYVGY EGGQLTEAVRRRPYT
Sbjct: 554 ELAKSLASYFFGSEEAMIRLDMSEYMERHTVSKLIGSPPGYVGYNEGGQLTEAVRRRPYT 613
Query: 481 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI 540
VVLFDEIEKAHPDVFNM+LQILEDGRLTD+KGRTVDFKNTLLI+TSN+GS VIEKGG I
Sbjct: 614 VVLFDEIEKAHPDVFNMLLQILEDGRLTDAKGRTVDFKNTLLILTSNIGSKVIEKGGGGI 673
Query: 541 GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 600
GF+ D ++ YNRI+SLV EELKQYFRPEFLNRLDE+IVFRQL+K EV EIA+IMLKE
Sbjct: 674 GFEFADDATETQYNRIRSLVNEELKQYFRPEFLNRLDEIIVFRQLSKPEVTEIAEIMLKE 733
Query: 601 VFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEG 660
VF RL K I L+VT+RF++R++EEGY+PSYGARPLRRAIMRLLEDS+AE++L+ IK+G
Sbjct: 734 VFGRLTEKGIVLEVTDRFKDRLIEEGYSPSYGARPLRRAIMRLLEDSLAEEILSGRIKDG 793
Query: 661 DSVIVDVDSDGNVTV 675
D+ +VDVD +G V V
Sbjct: 794 DTALVDVDENGIVQV 808
>gi|254431180|ref|ZP_05044883.1| ATPase, AAA family [Cyanobium sp. PCC 7001]
gi|197625633|gb|EDY38192.1| ATPase, AAA family [Cyanobium sp. PCC 7001]
Length = 843
Score = 1017 bits (2629), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 508/699 (72%), Positives = 593/699 (84%), Gaps = 17/699 (2%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
M+GE+ E G G GS+ K PTL+E+G+NLT+ A +GKLDPVVGRQ +IERV+QILGR
Sbjct: 141 MLGETAEVAAGGGGKGST--KTPTLDEFGSNLTQQAADGKLDPVVGRQHEIERVIQILGR 198
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNP LIGEPGVGKTAIAEGLAQRI SGDVPD +E K+V+TLD+GLLVAGTKYRGEFE
Sbjct: 199 RTKNNPVLIGEPGVGKTAIAEGLAQRINSGDVPDILEEKRVLTLDIGLLVAGTKYRGEFE 258
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
ERLKK+MEEI+ + +IL IDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTLD
Sbjct: 259 ERLKKIMEEIRGAGNVILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLD 318
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRKHIE+D ALERRFQPV V EPSV++TI+IL+GL+ERYE HH+L+ DEAL++AA L
Sbjct: 319 EYRKHIERDAALERRFQPVMVGEPSVEDTIEILRGLKERYEEHHRLKIADEALIAAATLG 378
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
+YISDRFLPDKAIDLIDEAGSRVRL +++LP A+E++K+LR + K+K EAVR QDF K
Sbjct: 379 DRYISDRFLPDKAIDLIDEAGSRVRLMNSKLPPAAKEVDKQLRAVQKQKEEAVREQDFTK 438
Query: 301 AGELRDREMDLKAQISALVDKGKEMSKAETEA------------GDVGPVVTEVDIQHIV 348
AGELRDRE++L+ QI ++ K+ A EA D P+V+E DI HIV
Sbjct: 439 AGELRDREVELREQIRTILQARKDEEPATAEASGETPAPVATDDADRSPMVSEEDIAHIV 498
Query: 349 SAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIAS 408
++WTG+PV+K++ ES +LL MEETLH+R+IGQDEAVKA+SRAIRRARVGLKNPNRPIAS
Sbjct: 499 ASWTGVPVQKLTESESAKLLNMEETLHQRLIGQDEAVKAVSRAIRRARVGLKNPNRPIAS 558
Query: 409 FIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGG 468
FIFSGPTGVGK+EL K+LAAY+FGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVG+ EGG
Sbjct: 559 FIFSGPTGVGKTELTKSLAAYFFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGFNEGG 618
Query: 469 QLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNV 528
QLTEAVRRRPYTVVLFDEIEKAHPDVFN++LQ+LEDGRLTDSKGRTVDFKNTL+IMTSN+
Sbjct: 619 QLTEAVRRRPYTVVLFDEIEKAHPDVFNLLLQLLEDGRLTDSKGRTVDFKNTLIIMTSNI 678
Query: 529 GSSVIEKGGRRIGFDLD-YDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTK 587
GS VIEKGG +GF+ D +++ YNRI+SLV EELKQYFRPEFLNRLDE+IVFRQLT+
Sbjct: 679 GSKVIEKGGGGLGFEFSGSDAEETQYNRIRSLVNEELKQYFRPEFLNRLDEIIVFRQLTR 738
Query: 588 LEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDS 647
EVKEIA+IMLKEVF R+ K I L VTE F+ER+VEEGYNPSYGARPLRRA+MRLLEDS
Sbjct: 739 DEVKEIAEIMLKEVFGRMDEKGIHLSVTEAFKERLVEEGYNPSYGARPLRRAVMRLLEDS 798
Query: 648 MAEKMLAREIKEGDSVIVDVDSDGNVTVL--NGSSGAPE 684
+AE+ L+ I EGDS +VDV+ D V +L N PE
Sbjct: 799 LAEEFLSGRIGEGDSAVVDVNDDKQVVILKQNAIPAIPE 837
>gi|428211987|ref|YP_007085131.1| chaperone ATPase [Oscillatoria acuminata PCC 6304]
gi|428000368|gb|AFY81211.1| ATPase with chaperone activity, ATP-binding subunit [Oscillatoria
acuminata PCC 6304]
Length = 822
Score = 1015 bits (2625), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 496/678 (73%), Positives = 590/678 (87%), Gaps = 7/678 (1%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
M+GE+ E G ++ K PTL+E+G NLT++A EGKLDPVVGRQ +IERV+QILGR
Sbjct: 141 MLGETAEVTS---GASNARTKTPTLDEFGANLTQMAAEGKLDPVVGRQKEIERVIQILGR 197
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNP LIGEPGVGKTAIAEGLAQRIA+ DVPD +E K+V+TLD+GLLVAGTKYRGEFE
Sbjct: 198 RTKNNPVLIGEPGVGKTAIAEGLAQRIANNDVPDILEDKRVVTLDIGLLVAGTKYRGEFE 257
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
ERLKK+M+EI+ + +IL IDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTLD
Sbjct: 258 ERLKKIMDEIRSARNVILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLD 317
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRKHIE+D ALERRFQPV V EP+VDETI+IL GLR+RYE HHKL+ +DEAL +AA+LS
Sbjct: 318 EYRKHIERDAALERRFQPVMVGEPTVDETIEILFGLRDRYEQHHKLKISDEALDAAAKLS 377
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
+YISDRFLPDKAIDL+DEAGSRVRL ++QLP A+EL+KELRQ+ K+K++AVR QDF++
Sbjct: 378 DRYISDRFLPDKAIDLVDEAGSRVRLINSQLPPAAKELDKELRQVLKDKDDAVRSQDFDR 437
Query: 301 AGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVS 360
AGELRDREM++KA+I ++ K ++ PVVTE DI IV++WTG+PV K++
Sbjct: 438 AGELRDREMEIKAEIRSIASN----KKTGVSDSELSPVVTEEDIAQIVASWTGVPVNKLT 493
Query: 361 TDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 420
ES++L+ ME+TLH+R+IGQ+EAVKA+SRAIRRARVGLKNPNRPIASFIFSGPTGVGK+
Sbjct: 494 ESESEKLMHMEDTLHQRLIGQEEAVKAVSRAIRRARVGLKNPNRPIASFIFSGPTGVGKT 553
Query: 421 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 480
EL KALA+Y+FGSEEAMIRLDMSE+MERHTVSKLIGSPPGYVGY EGGQLTEAVRRRPYT
Sbjct: 554 ELTKALASYFFGSEEAMIRLDMSEYMERHTVSKLIGSPPGYVGYNEGGQLTEAVRRRPYT 613
Query: 481 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI 540
VVLFDEIEKAHPDVFNM+LQILEDGRLTD+KGRTVDFKNTLLIMTSN+GS VIEKGG +
Sbjct: 614 VVLFDEIEKAHPDVFNMLLQILEDGRLTDAKGRTVDFKNTLLIMTSNIGSKVIEKGGGGL 673
Query: 541 GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 600
GF+ + ++ D+ YNRI+SLV EELK YFRPEFLNRLDE+IVFRQL K EVK I++IMLKE
Sbjct: 674 GFEFEQNQADAQYNRIRSLVNEELKNYFRPEFLNRLDEIIVFRQLVKDEVKLISEIMLKE 733
Query: 601 VFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEG 660
VF RL K I L+VT+RF+ER++EEGYNP+YGARPLRRAIMRLLED +AE++L+ +KEG
Sbjct: 734 VFSRLTEKGITLEVTDRFKERLIEEGYNPAYGARPLRRAIMRLLEDVLAEEILSGRVKEG 793
Query: 661 DSVIVDVDSDGNVTVLNG 678
++ +VD+ +G V V G
Sbjct: 794 ETALVDIGEEGQVIVRPG 811
>gi|443329502|ref|ZP_21058087.1| ATPase with chaperone activity, ATP-binding subunit [Xenococcus sp.
PCC 7305]
gi|442790840|gb|ELS00342.1| ATPase with chaperone activity, ATP-binding subunit [Xenococcus sp.
PCC 7305]
Length = 822
Score = 1015 bits (2624), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 500/677 (73%), Positives = 592/677 (87%), Gaps = 8/677 (1%)
Query: 1 MVGESTEAVGAGVGGGSSG-NKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 59
M+GE+ E GGGSSG NK PTL+E+G+NLT++A EGKLDPVVGRQ +IERV+QILG
Sbjct: 141 MLGETAEV---ATGGGSSGRNKTPTLDEFGSNLTQMASEGKLDPVVGRQKEIERVIQILG 197
Query: 60 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 119
RRTKNNP LIGEPGVGKTAIAEGLAQRIA+ D+PD +E K+V+TLD+GLLVAGTKYRGEF
Sbjct: 198 RRTKNNPVLIGEPGVGKTAIAEGLAQRIANQDIPDILEEKRVVTLDIGLLVAGTKYRGEF 257
Query: 120 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 179
EERLKK+M+EI+Q+ +IL IDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTL
Sbjct: 258 EERLKKIMDEIRQAGNVILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTL 317
Query: 180 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 239
DEYRKHIE+D ALERRFQPV V EPSV+ETI+IL GLRERYE HHKL+ DEAL +AA+L
Sbjct: 318 DEYRKHIERDAALERRFQPVMVGEPSVEETIEILYGLRERYEQHHKLKILDEALEAAAKL 377
Query: 240 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 299
S +YISDR+LPDKAIDLIDEAGSRVRL ++QLP A+EL+KELR I KEK++AVR QDF+
Sbjct: 378 SDRYISDRYLPDKAIDLIDEAGSRVRLINSQLPPAAKELDKELRGILKEKDDAVRSQDFD 437
Query: 300 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 359
KAG LRDREM++K QI + K ET + P V +I HIV++WTG+PV K+
Sbjct: 438 KAGSLRDREMEIKEQIRNIASAKKSEEDTETNS----PFVDSEEIAHIVASWTGVPVNKL 493
Query: 360 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 419
+ ES++LL ME+TLH+R+IGQ++AVKAISRAIRRARVGLKNPNRPIASF+FSGPTGVGK
Sbjct: 494 TETESEKLLHMEDTLHQRIIGQEDAVKAISRAIRRARVGLKNPNRPIASFVFSGPTGVGK 553
Query: 420 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 479
+EL KALA Y+FGSEEAMIRLDMSE+MERHTVSKLIGSPPGYVGY EGGQLTEAVRRRPY
Sbjct: 554 TELTKALATYFFGSEEAMIRLDMSEYMERHTVSKLIGSPPGYVGYNEGGQLTEAVRRRPY 613
Query: 480 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 539
TVVLFDEIEKAHPD+FNM+LQILEDGRLTD+KGRTVDFKNTLLI+TSN+GS VIEKGG
Sbjct: 614 TVVLFDEIEKAHPDIFNMLLQILEDGRLTDAKGRTVDFKNTLLILTSNIGSKVIEKGGGG 673
Query: 540 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 599
+GF+ + + ++ YNRIKSLV EELK YFRPEFLNRLDE+IVFRQL+K EVKEIA+I+LK
Sbjct: 674 LGFEFEDNAGEAQYNRIKSLVNEELKNYFRPEFLNRLDEIIVFRQLSKDEVKEIAEILLK 733
Query: 600 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 659
EVF RL K+I+L+VT++F+ER+V+EG+NP+YGARPLRRAIMRLLED +AE++L+ + E
Sbjct: 734 EVFTRLTEKEIDLEVTDKFKERLVDEGFNPAYGARPLRRAIMRLLEDVLAEEILSGRLGE 793
Query: 660 GDSVIVDVDSDGNVTVL 676
GD+ +VDV+ +G V +L
Sbjct: 794 GDTAVVDVNEEGKVKIL 810
>gi|755163|gb|AAB67745.1| ClpC [Synechococcus elongatus PCC 7942]
Length = 839
Score = 1015 bits (2624), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 502/677 (74%), Positives = 588/677 (86%), Gaps = 7/677 (1%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
M+GE+ E GGG K PTL+E+G+NLT+ A +GKLDPVVGRQ +IERV+QILGR
Sbjct: 156 MLGETAEV---STGGGQGRTKTPTLDEFGSNLTQQAADGKLDPVVGRQKEIERVIQILGR 212
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNP LIGEPGVGKTAIAEGLAQRIA+GD+PD +E K+V+TLD+GLLVAGTKYRGEFE
Sbjct: 213 RTKNNPVLIGEPGVGKTAIAEGLAQRIATGDIPDILEDKRVVTLDIGLLVAGTKYRGEFE 272
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
ERLKK+M+EI+ + +IL IDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTLD
Sbjct: 273 ERLKKIMDEIRSAGNVILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLD 332
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRKHIE+D ALERRFQPV + EPSVD+TI+IL+GLRERYE HHKL+ DEAL +AA+L+
Sbjct: 333 EYRKHIERDAALERRFQPVMLGEPSVDDTIEILRGLRERYEQHHKLKIADEALEAAAKLA 392
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
+YISD FLPDKAIDLIDEAGSRVRL ++QL A+EL+KELRQ+ K+K++AVR QDF+K
Sbjct: 393 DRYISDLFLPDKAIDLIDEAGSRVRLMNSQLAPAAKELDKELRQVLKDKDDAVRSQDFDK 452
Query: 301 AGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVS 360
AGELRDREM++K QI ++ K + T D P+VTE DI HIV++WTG+PV K++
Sbjct: 453 AGELRDREMEIKTQIRSIAQSKKADGTSST---DDSPIVTEEDIAHIVASWTGVPVNKLT 509
Query: 361 TDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 420
ES +LL MEETLH R+IGQDEAVKA+SRAIRRARVGLKNPNRPIASFIFSGPTGVGK+
Sbjct: 510 ESESTKLLNMEETLHSRLIGQDEAVKAVSRAIRRARVGLKNPNRPIASFIFSGPTGVGKT 569
Query: 421 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 480
EL KALAAY+FGSEEAMIRLDMSE+MERHTVSKLIGSPPGYVGY EGGQLTEAVRRRPYT
Sbjct: 570 ELTKALAAYFFGSEEAMIRLDMSEYMERHTVSKLIGSPPGYVGYNEGGQLTEAVRRRPYT 629
Query: 481 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI 540
VVL DEIEKAHPDVFN++LQ+LEDGRLTD+KGRTVDFKNTL+I+TSN+GS VIEKGG +
Sbjct: 630 VVLLDEIEKAHPDVFNLLLQLLEDGRLTDAKGRTVDFKNTLIILTSNIGSKVIEKGGGGL 689
Query: 541 GFDLD-YDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 599
GF+ DE ++ YNRI+SLV EELKQYFRPEFLNRLDE+IVFRQL K EVKEIADIML+
Sbjct: 690 GFEFSGVDEAENQYNRIRSLVNEELKQYFRPEFLNRLDEIIVFRQLNKEEVKEIADIMLR 749
Query: 600 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 659
EVF R+ K I L VTE+F++R+VEEGYNPSYGARPLRRAIMRLLEDS+AE+ L+ +++E
Sbjct: 750 EVFGRMLEKGISLSVTEKFKDRLVEEGYNPSYGARPLRRAIMRLLEDSLAEEFLSGKLRE 809
Query: 660 GDSVIVDVDSDGNVTVL 676
GD+ +VD+ +G V VL
Sbjct: 810 GDTAVVDIGEEGKVQVL 826
>gi|428770031|ref|YP_007161821.1| ATPase [Cyanobacterium aponinum PCC 10605]
gi|428684310|gb|AFZ53777.1| ATPase AAA-2 domain protein [Cyanobacterium aponinum PCC 10605]
Length = 822
Score = 1014 bits (2623), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 509/675 (75%), Positives = 599/675 (88%), Gaps = 6/675 (0%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
M+GE TE GVGGGS NK PTL+E+G+NLT LA +GKLDPVVGRQ +IERV+QILGR
Sbjct: 141 MLGE-TETTAVGVGGGSRSNKTPTLDEFGSNLTVLAVDGKLDPVVGRQKEIERVIQILGR 199
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNP LIGEPGVGKTAIAEGLAQRIA+ DVPD +E K+V+TLD+GLLVAGTKYRGEFE
Sbjct: 200 RTKNNPVLIGEPGVGKTAIAEGLAQRIANKDVPDLLEEKRVVTLDIGLLVAGTKYRGEFE 259
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
ERLKK+M+EI+Q+ +IL IDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTLD
Sbjct: 260 ERLKKIMDEIRQAGNVILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLD 319
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRKHIE+D AL RRFQPV V EPSV+ETI+IL GLRE+YE HHKL+ DEAL +AA+LS
Sbjct: 320 EYRKHIERDAALARRFQPVMVGEPSVEETIEILFGLREKYEQHHKLKIADEALAAAAKLS 379
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
+YISDR+LPDKAIDLIDEAGSRVRL ++QLP EA+EL++ELRQ+ KEK+EAVR QDF+K
Sbjct: 380 DRYISDRYLPDKAIDLIDEAGSRVRLLNSQLPPEAKELDQELRQVLKEKDEAVRSQDFDK 439
Query: 301 AGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVS 360
AGELRDREM++KA+I +L D+ K+ + P+V E +I HIV++WTG+PV+K++
Sbjct: 440 AGELRDREMEIKAEIRSLADQKKKSADIND-----NPIVDEEEIAHIVASWTGVPVQKLT 494
Query: 361 TDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 420
E+D+LL MEETLH+R+IGQ++AVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK+
Sbjct: 495 ESEADKLLHMEETLHQRIIGQEDAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKT 554
Query: 421 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 480
EL KALA Y+FGSE+AMIRLDMSEFMERHTVSKLIGSPPGYVGY EGGQLTEAVRRRPYT
Sbjct: 555 ELTKALATYFFGSEDAMIRLDMSEFMERHTVSKLIGSPPGYVGYNEGGQLTEAVRRRPYT 614
Query: 481 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI 540
VVLFDEIEKAHPDVFN++LQILEDGRLTDSKGRTVDFKNTLLIMTSN+GS VIEKGG +
Sbjct: 615 VVLFDEIEKAHPDVFNLLLQILEDGRLTDSKGRTVDFKNTLLIMTSNIGSKVIEKGGGGL 674
Query: 541 GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 600
GF+L+ D+ +S YNRI+SLV EELK YFRPEFLNRLDE+IVFRQL K EVKEI++I+LKE
Sbjct: 675 GFELEEDQNESQYNRIRSLVNEELKNYFRPEFLNRLDEIIVFRQLNKEEVKEISEILLKE 734
Query: 601 VFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEG 660
VF RL ++I LQVT++F+ER++EEG+NP+YGARPLRRAIMRLLED +AE++L++ ++EG
Sbjct: 735 VFARLTEQEITLQVTDKFKERLIEEGFNPAYGARPLRRAIMRLLEDILAEEILSKRLQEG 794
Query: 661 DSVIVDVDSDGNVTV 675
DS IVD+ DG V +
Sbjct: 795 DSAIVDIGEDGKVII 809
>gi|427717814|ref|YP_007065808.1| ATPase [Calothrix sp. PCC 7507]
gi|427350250|gb|AFY32974.1| ATPase AAA-2 domain protein [Calothrix sp. PCC 7507]
Length = 822
Score = 1014 bits (2623), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 507/676 (75%), Positives = 595/676 (88%), Gaps = 9/676 (1%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
M+GE+ E G G + K PTL+E+G+NLT++A + KLDPVVGR +IERV+QILGR
Sbjct: 141 MLGETAEVSATGQSGRT---KTPTLDEFGSNLTQMATDNKLDPVVGRAKEIERVIQILGR 197
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNP LIGEPGVGKTAIAEGLA RIA+ DVPD +E K+V+TLD+GLLVAGTKYRGEFE
Sbjct: 198 RTKNNPVLIGEPGVGKTAIAEGLASRIANKDVPDILEDKRVVTLDIGLLVAGTKYRGEFE 257
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
ERLKK+M+EI+ + +IL IDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTLD
Sbjct: 258 ERLKKIMDEIRSAGNVILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLD 317
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRKHIE+D ALERRFQPV V EP+VDETI+IL GLRERYE HHKL+ +DEAL++AA+LS
Sbjct: 318 EYRKHIERDAALERRFQPVMVGEPTVDETIEILHGLRERYEQHHKLKISDEALIAAAKLS 377
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
+YISDR+LPDKAIDLIDEAGSRVRL ++QLP A+EL+KELRQI KEK++AVR QDF+K
Sbjct: 378 DRYISDRYLPDKAIDLIDEAGSRVRLINSQLPPAAKELDKELRQILKEKDDAVRSQDFDK 437
Query: 301 AGELRDREMDLKAQISALVDKGKEMSKAETEAGD-VGPVVTEVDIQHIVSAWTGIPVEKV 359
AGELRDREM++KA+I A+ SK +GD V PVVTE DI HIV++WTG+PV K+
Sbjct: 438 AGELRDREMEIKAEIRAIAQ-----SKTNGASGDGVEPVVTEEDIAHIVASWTGVPVNKL 492
Query: 360 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 419
+ ES++LL ME+TLH+R+IGQ++AVKA+SRAIRRARVGLKNPNRPIASF+FSGPTGVGK
Sbjct: 493 TESESEKLLHMEDTLHQRLIGQEDAVKAVSRAIRRARVGLKNPNRPIASFVFSGPTGVGK 552
Query: 420 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 479
+ELAK+LA+Y+FGSEEAMIRLDMSE+MERHTVSKLIGSPPGYVGY EGGQLTEAVRRRPY
Sbjct: 553 TELAKSLASYFFGSEEAMIRLDMSEYMERHTVSKLIGSPPGYVGYNEGGQLTEAVRRRPY 612
Query: 480 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 539
TVVLFDEIEKAHPDVFNM+LQILEDGRLTD+KGRTVDFKNTLLI+TSN+GS VIEKGG
Sbjct: 613 TVVLFDEIEKAHPDVFNMLLQILEDGRLTDAKGRTVDFKNTLLILTSNIGSKVIEKGGGG 672
Query: 540 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 599
IGF+ D+ +S YNRIK+LV EELKQYFRPEFLNRLDE+IVFRQL+K+EV +IA+IMLK
Sbjct: 673 IGFEFGEDQSESQYNRIKTLVNEELKQYFRPEFLNRLDEIIVFRQLSKVEVTQIAEIMLK 732
Query: 600 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 659
EVF RL K I L+VT+RF+ER++ EGY+PSYGARPLRRAIMRLLEDS+AE++L+ IK+
Sbjct: 733 EVFGRLTEKGITLEVTDRFKERLITEGYSPSYGARPLRRAIMRLLEDSLAEEILSGRIKD 792
Query: 660 GDSVIVDVDSDGNVTV 675
GD IVDVD +G V V
Sbjct: 793 GDIAIVDVDENGIVQV 808
>gi|284929449|ref|YP_003421971.1| ATPase with chaperone activity, ATP-binding subunit [cyanobacterium
UCYN-A]
gi|284809893|gb|ADB95590.1| ATPase with chaperone activity, ATP-binding subunit [cyanobacterium
UCYN-A]
Length = 825
Score = 1013 bits (2620), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 498/686 (72%), Positives = 593/686 (86%), Gaps = 8/686 (1%)
Query: 2 VGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRR 61
+GE+ E GV G + K PTL+E+G+NLT+LA +G+LDPVVGRQ +IERV+QILGRR
Sbjct: 142 LGETAEVAAGGVAPGRT--KTPTLDEFGSNLTQLATDGQLDPVVGRQKEIERVIQILGRR 199
Query: 62 TKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEE 121
TKNNP LIGEPGVGKTAIAEGLAQRIA D+PD +E KKV+TLD+GLLVAGTKYRGEFEE
Sbjct: 200 TKNNPVLIGEPGVGKTAIAEGLAQRIADQDIPDILEDKKVVTLDIGLLVAGTKYRGEFEE 259
Query: 122 RLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDE 181
RLKK+MEEI+Q++ IIL IDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTLDE
Sbjct: 260 RLKKIMEEIRQTENIILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDE 319
Query: 182 YRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSY 241
YRKHIEKD ALERRFQPV V EP+V+ET+QIL GLRERYE HHKL+ DEAL +AA+LS
Sbjct: 320 YRKHIEKDAALERRFQPVMVGEPTVEETVQILYGLRERYEQHHKLKILDEALEAAAKLSD 379
Query: 242 QYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKA 301
+YISDRFLPDKAIDLIDEAGSRVRL ++QLP EA+EL+KELR I K+K++AVR QDF A
Sbjct: 380 RYISDRFLPDKAIDLIDEAGSRVRLINSQLPPEAKELDKELRTILKQKDDAVRSQDFNHA 439
Query: 302 GELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVST 361
G+LRD+EM++K++I ++ K E E + P V +I HIV++WTG+PV K++
Sbjct: 440 GQLRDQEMEIKSKIRSI----SSTKKGEGENDE--PFVDSEEIAHIVASWTGVPVNKLTE 493
Query: 362 DESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSE 421
ES++LL ME TLH+R+IGQ++AVKA+SRAIRRARVGLKNPNRPIASFIFSGPTGVGK+E
Sbjct: 494 TESEKLLNMETTLHQRLIGQEDAVKAVSRAIRRARVGLKNPNRPIASFIFSGPTGVGKTE 553
Query: 422 LAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTV 481
L KALAAY+FGSE+AM+RLDMSE+MERHTVSKLIGSPPGYVGY EGGQLTEAVRRRPYTV
Sbjct: 554 LTKALAAYFFGSEDAMVRLDMSEYMERHTVSKLIGSPPGYVGYNEGGQLTEAVRRRPYTV 613
Query: 482 VLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIG 541
+LFDEIEKAHPD+FNM+LQILEDGRLTD+KGRTVDFKNTLLIMTSN+GS VIEKGG +G
Sbjct: 614 ILFDEIEKAHPDIFNMLLQILEDGRLTDAKGRTVDFKNTLLIMTSNIGSKVIEKGGGGLG 673
Query: 542 FDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEV 601
F+ + ++ D+ YNRI+SLV EELK+YFRPEFLNRLDE+IVFRQL K EVKEI++I+LKEV
Sbjct: 674 FEFENNQADAQYNRIRSLVNEELKEYFRPEFLNRLDEIIVFRQLNKEEVKEISEILLKEV 733
Query: 602 FDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGD 661
F RL K+I LQVT++F+ER+VEEGYNPSYGARPLRRAIMRLLED +AE++L+ +++EGD
Sbjct: 734 FARLTEKEITLQVTDKFKERLVEEGYNPSYGARPLRRAIMRLLEDILAEEILSGKVREGD 793
Query: 662 SVIVDVDSDGNVTVLNGSSGAPESLA 687
VD+D G V ++ P S++
Sbjct: 794 IAEVDIDEQGQVKIIVAEDKQPHSIS 819
>gi|434389096|ref|YP_007099707.1| ATPase with chaperone activity, ATP-binding subunit [Chamaesiphon
minutus PCC 6605]
gi|428020086|gb|AFY96180.1| ATPase with chaperone activity, ATP-binding subunit [Chamaesiphon
minutus PCC 6605]
Length = 833
Score = 1011 bits (2615), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 496/676 (73%), Positives = 593/676 (87%), Gaps = 4/676 (0%)
Query: 1 MVGESTEAVGAGVGGGSSG-NKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 59
M+GE++E AG G SSG NK PTL+E+G+NLT+LA +GKLDPVVGR +IERV+QILG
Sbjct: 141 MLGETSETATAGTGARSSGSNKTPTLDEFGSNLTQLAHDGKLDPVVGRAKEIERVIQILG 200
Query: 60 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 119
RRTKNNP LIGEPGVGKTAIAEGLAQRIA+ D+PD +E K+V+TLD+GLLVAGTKYRGEF
Sbjct: 201 RRTKNNPVLIGEPGVGKTAIAEGLAQRIANQDIPDILEDKRVVTLDIGLLVAGTKYRGEF 260
Query: 120 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 179
EERLKK+M+EI+Q+ +IL IDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTL
Sbjct: 261 EERLKKIMDEIRQAGNVILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTL 320
Query: 180 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 239
DEYRKHIE+D ALERRFQPV V EPSVDETI+IL GLRERYE HHKL+ TD AL +AA+L
Sbjct: 321 DEYRKHIERDAALERRFQPVMVGEPSVDETIEILHGLRERYEQHHKLKITDLALEAAAKL 380
Query: 240 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 299
+ +YISDRFLPDKAIDL+DEAGSRVRL ++QLP A+EL+KELR++ KEK+EAVR QDF+
Sbjct: 381 ADRYISDRFLPDKAIDLMDEAGSRVRLLNSQLPAAAKELDKELRKVLKEKDEAVRSQDFD 440
Query: 300 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 359
KAG L+DRE+++KA+I ++ K + E V P VTE DI IV++WTG+PV K+
Sbjct: 441 KAGSLKDREIEIKAEIKSIAQAKKTSDETEDR---VMPEVTEEDIAQIVASWTGVPVSKL 497
Query: 360 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 419
+ ES +LL MEETLH+R+IGQ+EAVKA+SRAIRRARVGLKNPNRPIASFIFSGPTGVGK
Sbjct: 498 TESESVKLLNMEETLHQRLIGQEEAVKAVSRAIRRARVGLKNPNRPIASFIFSGPTGVGK 557
Query: 420 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 479
+EL KALA Y+FGSE++MIRLDMSE+MERHTVSKLIGSPPGYVGY+EGGQLTEAVRR+PY
Sbjct: 558 TELTKALATYFFGSEDSMIRLDMSEYMERHTVSKLIGSPPGYVGYSEGGQLTEAVRRKPY 617
Query: 480 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 539
TVVLFDEIEKAHPD+FNM+LQILEDGRLTD+KGRTVDFKNTL+I+TSNVGS VIEKGG
Sbjct: 618 TVVLFDEIEKAHPDIFNMLLQILEDGRLTDAKGRTVDFKNTLIILTSNVGSKVIEKGGGG 677
Query: 540 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 599
+GF+ ++ +++YNRI+SLV EELK YFRPEFLNRLDE+IVF+QLTK EVK+IADIMLK
Sbjct: 678 LGFEFSDNKTEATYNRIRSLVNEELKNYFRPEFLNRLDEIIVFQQLTKPEVKQIADIMLK 737
Query: 600 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 659
++F RL + I L+VT+RF++R+++EGYNP+YGARPLRRAIMRLLED +AE+ML+ +K+
Sbjct: 738 DLFTRLTQQGIHLEVTDRFKDRLIDEGYNPAYGARPLRRAIMRLLEDILAEEMLSGRLKD 797
Query: 660 GDSVIVDVDSDGNVTV 675
GD+ IVD+ DG V
Sbjct: 798 GDTSIVDMGEDGKAIV 813
>gi|218438847|ref|YP_002377176.1| ATPase AAA [Cyanothece sp. PCC 7424]
gi|218171575|gb|ACK70308.1| ATPase AAA-2 domain protein [Cyanothece sp. PCC 7424]
Length = 821
Score = 1011 bits (2615), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 498/679 (73%), Positives = 593/679 (87%), Gaps = 10/679 (1%)
Query: 1 MVGESTEAVGAGVGGGSSG-NKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 59
M+GE+ E GG ++G NK PTL+E+G+NLT++A EGKLDPVVGRQ +IERV+QILG
Sbjct: 141 MLGETAEVAA---GGPTTGRNKTPTLDEFGSNLTQMAAEGKLDPVVGRQKEIERVIQILG 197
Query: 60 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 119
RRTKNNP LIGEPGVGKTAIAEGLAQRIA+ DVPD +E K+V+TLD+GLLVAGTKYRGEF
Sbjct: 198 RRTKNNPVLIGEPGVGKTAIAEGLAQRIANKDVPDILEEKRVVTLDIGLLVAGTKYRGEF 257
Query: 120 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 179
EERLKK+M+EI+Q+ +IL IDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTL
Sbjct: 258 EERLKKIMDEIRQAGNVILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTL 317
Query: 180 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 239
DEYRKHIE+D ALERRFQPV V EP+VDETI+IL GLRERYE HHKL+ DEAL +AA+L
Sbjct: 318 DEYRKHIERDAALERRFQPVMVGEPTVDETIEILYGLRERYEQHHKLKILDEALEAAAKL 377
Query: 240 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 299
S +YISDR+LPDKAIDLIDEAGSRVRL +QLP A+EL+KELRQI K+K++AVR QDF+
Sbjct: 378 SDRYISDRYLPDKAIDLIDEAGSRVRLITSQLPPAAKELDKELRQILKQKDDAVRAQDFD 437
Query: 300 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 359
+AGELRDREM++K++I A+ K + + P V +I +IV++WTGIPV K+
Sbjct: 438 RAGELRDREMEIKSEIRAIASAKKNEGEGDE------PHVDAEEIANIVASWTGIPVNKL 491
Query: 360 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 419
+ ES++LL ME+TLH+R+IGQ++AVKA+SRAIRRARVGLKNPNRPIASF+FSGPTGVGK
Sbjct: 492 TETESEKLLHMEDTLHQRLIGQEDAVKAVSRAIRRARVGLKNPNRPIASFVFSGPTGVGK 551
Query: 420 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 479
+EL KALAAY+FGSE+AMIRLDMSEFMERHTVSKLIGSPPGYVGY EGGQLTEAVRRRPY
Sbjct: 552 TELTKALAAYFFGSEDAMIRLDMSEFMERHTVSKLIGSPPGYVGYNEGGQLTEAVRRRPY 611
Query: 480 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 539
TVVLFDEIEKAHPDVFN++LQILEDGRLTD+KGRTVDFKNTLLIMTSN+GS VIEKGG
Sbjct: 612 TVVLFDEIEKAHPDVFNILLQILEDGRLTDAKGRTVDFKNTLLIMTSNIGSKVIEKGGGG 671
Query: 540 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 599
+GF+ + D+ ++ YNRI+SLV EELKQYFRPEFLNRLDE+IVFRQL + EV +IADI+LK
Sbjct: 672 LGFEFETDQAEAQYNRIRSLVNEELKQYFRPEFLNRLDEIIVFRQLNRDEVTDIADILLK 731
Query: 600 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 659
EVF RL K I L+VT++F++R+VEEGYNP+YGARPLRRAIMRLLED +AE++L+ +KE
Sbjct: 732 EVFGRLTEKGITLEVTQKFKDRLVEEGYNPAYGARPLRRAIMRLLEDVLAEEILSGRVKE 791
Query: 660 GDSVIVDVDSDGNVTVLNG 678
GD+ + D+D +G V +L G
Sbjct: 792 GDTAVADIDEEGKVKILPG 810
>gi|33240557|ref|NP_875499.1| Clp protease ATP-binding subunit [Prochlorococcus marinus subsp.
marinus str. CCMP1375]
gi|33238085|gb|AAQ00152.1| ATPase with chaperone activity ATP-binding subunit [Prochlorococcus
marinus subsp. marinus str. CCMP1375]
Length = 856
Score = 1011 bits (2613), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 496/691 (71%), Positives = 592/691 (85%), Gaps = 27/691 (3%)
Query: 21 KMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIA 80
K TL+E+GTNLTKLA E KLDPVVGR +I+RV+QILGRRTKNNP LIGEPGVGKTAIA
Sbjct: 160 KTATLDEFGTNLTKLASESKLDPVVGRHDEIDRVIQILGRRTKNNPVLIGEPGVGKTAIA 219
Query: 81 EGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFI 140
EGLAQRI GD+PD +E K+V+TLD+GLLVAGTKYRGEFEERLKK+MEEIK + +IL I
Sbjct: 220 EGLAQRIQQGDIPDILEEKRVLTLDIGLLVAGTKYRGEFEERLKKIMEEIKSAGNVILVI 279
Query: 141 DEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVK 200
DEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTLDEYRKHIE+D ALERRFQPV
Sbjct: 280 DEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIERDAALERRFQPVM 339
Query: 201 VPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEA 260
+ EPS+++TI+ILKGLRERYE HH+L+ TDEAL +AA L +YISDRFLPDKAIDLIDEA
Sbjct: 340 IGEPSIEDTIEILKGLRERYEQHHRLKITDEALNAAANLGDRYISDRFLPDKAIDLIDEA 399
Query: 261 GSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVD 320
GSRVRL +++LP EA++++KELR++ KEK EAVR QDF KAGELR++E++L+ +I +++D
Sbjct: 400 GSRVRLLNSKLPPEAKQVDKELRKVQKEKEEAVRDQDFTKAGELREKEVELRDKIRSILD 459
Query: 321 KGKE-MSKAETEAGDVG-----------------------PVVTEVDIQHIVSAWTGIPV 356
K+ S ++ ++ DV P+V E DI HIV++WTG+PV
Sbjct: 460 NSKQDSSNSKNDSEDVALVKNDESKNEINNSTKEEINQTMPMVNEEDIAHIVASWTGVPV 519
Query: 357 EKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTG 416
+K++ ES +LL ME+TLH+R+IGQDEAVK++S+AIRRARVGLKNPNRPIASFIFSGPTG
Sbjct: 520 QKLTESESVKLLNMEDTLHQRLIGQDEAVKSVSKAIRRARVGLKNPNRPIASFIFSGPTG 579
Query: 417 VGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRR 476
VGK+EL KALAAY+FGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVG+ EGGQLTEAVRR
Sbjct: 580 VGKTELTKALAAYFFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGFNEGGQLTEAVRR 639
Query: 477 RPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKG 536
RPYTVVLFDEIEKAHPDVFN++LQ+LE+GRLTDSKGRTVDFKNTL+IMTSN+GS VIEKG
Sbjct: 640 RPYTVVLFDEIEKAHPDVFNLLLQLLEEGRLTDSKGRTVDFKNTLIIMTSNIGSKVIEKG 699
Query: 537 GRRIGFDLDYDE-KDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIAD 595
G +GF++ + +DS YNRIKSLV EELKQYFRPEFLNRLDE+IVFRQLT++EVK+IA+
Sbjct: 700 GGGLGFEMAGESVEDSQYNRIKSLVNEELKQYFRPEFLNRLDEIIVFRQLTRMEVKDIAE 759
Query: 596 IMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAR 655
IMLKEVF R+K K I L V+E F+ER+VEEGYNPSYGARPLRRA+MRLLEDS+AE++L+
Sbjct: 760 IMLKEVFSRIKDKGITLSVSEAFKERLVEEGYNPSYGARPLRRAVMRLLEDSLAEEVLSG 819
Query: 656 EIKEGDSVIVDVDSDGNVTV--LNGSSGAPE 684
+IK+GD VD+D + NV V ++ +S PE
Sbjct: 820 KIKDGDQAEVDIDENKNVIVKHIDKNSNKPE 850
>gi|416380079|ref|ZP_11684027.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Crocosphaera
watsonii WH 0003]
gi|357265734|gb|EHJ14459.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Crocosphaera
watsonii WH 0003]
Length = 809
Score = 1010 bits (2611), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 499/684 (72%), Positives = 593/684 (86%), Gaps = 12/684 (1%)
Query: 2 VGESTEAVGAGVGGGSSG-NKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
+GE+ E GGG+ G K PTL+E+G+NLT+LA +G+LDPVVGRQ +IERV+QILGR
Sbjct: 128 LGETAEVAA---GGGTPGRTKTPTLDEFGSNLTQLAGDGQLDPVVGRQKEIERVIQILGR 184
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNP LIGEPGVGKTAIAEGLAQRIA+ D+PD +E K+V+TLD+GLLVAGTKYRGEFE
Sbjct: 185 RTKNNPVLIGEPGVGKTAIAEGLAQRIANKDIPDILEEKRVVTLDIGLLVAGTKYRGEFE 244
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
ERLKK+M+EI+Q+ +IL IDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTLD
Sbjct: 245 ERLKKIMDEIRQAGNVILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLD 304
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRKHIE+D ALERRFQPV V EPSVDET++IL GLRERYE HHKL+ DEAL +AA+LS
Sbjct: 305 EYRKHIERDAALERRFQPVMVGEPSVDETVEILFGLRERYEQHHKLKILDEALDAAAKLS 364
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
+YISDR+LPDKAIDLIDEAGSRVRL ++QLP A+EL+KELR I K+K++AVR QDF++
Sbjct: 365 DRYISDRYLPDKAIDLIDEAGSRVRLINSQLPPAAKELDKELRTILKQKDDAVRSQDFDR 424
Query: 301 AGELRDREMDLKAQISALVDKGKEMSKAETEAGDVG-PVVTEVDIQHIVSAWTGIPVEKV 359
AGELRD+EMD+K QI + +S A+ GD P V +I HIV++WTG+PV K+
Sbjct: 425 AGELRDQEMDIKEQI-------RSISTAKKGEGDSAEPFVDAEEIAHIVASWTGVPVNKL 477
Query: 360 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 419
+ ES++LL ME+TLH+R+IGQ++AVKA+SRAIRRARVGLKNPNRPIASF+FSGPTGVGK
Sbjct: 478 TETESEKLLHMEDTLHQRLIGQEDAVKAVSRAIRRARVGLKNPNRPIASFVFSGPTGVGK 537
Query: 420 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 479
+EL K+LAAY+FGSEEAMIRLDMSE+MERHTVSKLIGSPPGYVGY EGGQLTEAVRRRPY
Sbjct: 538 TELTKSLAAYFFGSEEAMIRLDMSEYMERHTVSKLIGSPPGYVGYNEGGQLTEAVRRRPY 597
Query: 480 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 539
TVVLFDEIEKAHPDVFNM+LQILEDGRLTD+KGRTVDFKNTLLIMTSN+GS VIEKGG
Sbjct: 598 TVVLFDEIEKAHPDVFNMLLQILEDGRLTDAKGRTVDFKNTLLIMTSNIGSKVIEKGGGG 657
Query: 540 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 599
+GF+ + D+ ++ YNRI++LV EELKQYFRPEFLNRLDE+IVFRQL K EVKEI++I+LK
Sbjct: 658 LGFEFEDDQNEAQYNRIRNLVNEELKQYFRPEFLNRLDEIIVFRQLNKEEVKEISEILLK 717
Query: 600 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 659
EVF RL K+I LQVT++F+ER+VEEGYNP+YGARPLRRAIMRLLED +AE++L+ + E
Sbjct: 718 EVFARLTEKEITLQVTDKFKERLVEEGYNPAYGARPLRRAIMRLLEDVLAEEILSGRVGE 777
Query: 660 GDSVIVDVDSDGNVTVLNGSSGAP 683
GD +VD+ DG V V++ P
Sbjct: 778 GDVAVVDIGEDGKVQVVSNEKQQP 801
>gi|378787369|gb|AFC40000.1| Clp protease ATP binding subunit [Porphyra umbilicalis]
Length = 821
Score = 1009 bits (2610), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 497/678 (73%), Positives = 586/678 (86%), Gaps = 4/678 (0%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
M+GE+ EA +G + +K PTLEE+G+NLT++A EG LDPVVGRQ +IERV+QILGR
Sbjct: 141 MLGENAEANVSGSNATQARSKTPTLEEFGSNLTQMAIEGGLDPVVGRQKEIERVIQILGR 200
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNP LIGEPGVGKTAIAEGLAQRIA+ DVP +E K VITLD+GLLVAGTKYRGEFE
Sbjct: 201 RTKNNPVLIGEPGVGKTAIAEGLAQRIANRDVPSILEDKLVITLDVGLLVAGTKYRGEFE 260
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
ERLK++M+EIK +D +IL IDEVHTLIGAGAAEGAIDAAN+LKP+LARGELQCIGATTL+
Sbjct: 261 ERLKRIMDEIKSADNVILVIDEVHTLIGAGAAEGAIDAANLLKPALARGELQCIGATTLE 320
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRKHIEKDPALERRFQPV V EPSV+ETI+IL GLR+RYE HH+L +D AL +AA+ +
Sbjct: 321 EYRKHIEKDPALERRFQPVVVGEPSVEETIEILFGLRDRYEKHHQLTMSDGALAAAAKYA 380
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
QYISDRFLPDKAIDLIDEAGSRVRL ++QLP AREL+KELR + K K+EA+R Q +E
Sbjct: 381 NQYISDRFLPDKAIDLIDEAGSRVRLLNSQLPPAARELDKELRAVLKTKDEAIRAQKYET 440
Query: 301 AGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVS 360
A + R REM++KAQI+A+ K E PVVTE DI IV+AWTGIPV K++
Sbjct: 441 AEQYRAREMEIKAQIAAIAQSKKNEPDLNLE----DPVVTEDDIAEIVAAWTGIPVTKLT 496
Query: 361 TDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 420
ES++L+ MEETLH R+IGQDEAV A+SRAIRRARVGLKNPNRPIASFIFSGPTGVGK+
Sbjct: 497 KSESEKLMHMEETLHGRIIGQDEAVVAVSRAIRRARVGLKNPNRPIASFIFSGPTGVGKT 556
Query: 421 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 480
EL KALA+Y+FGSE +MIRLDMSE+MERHTVSKLIGSPPGYVGY+EGG LTEAVR++PYT
Sbjct: 557 ELTKALASYFFGSEASMIRLDMSEYMERHTVSKLIGSPPGYVGYSEGGYLTEAVRKKPYT 616
Query: 481 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI 540
V+LFDEIEKAHPD+FN++LQILEDGRLTD+KGRT+DFKNTLLIMTSN+GS VIEKGG +
Sbjct: 617 VILFDEIEKAHPDIFNLLLQILEDGRLTDAKGRTIDFKNTLLIMTSNIGSKVIEKGGGSL 676
Query: 541 GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 600
GF+L D+ +S Y R++SLV EELKQYFRPEFLNRLDE+IVFRQLTK EV+EIA++ML E
Sbjct: 677 GFELSEDQTESQYTRVRSLVNEELKQYFRPEFLNRLDEIIVFRQLTKDEVREIAELMLNE 736
Query: 601 VFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEG 660
VF R+K +DI+L VTERF+ER+VEEGYNPSYGARPLRRA+MRLLEDS+AE++L+ +IK G
Sbjct: 737 VFARIKQQDIQLNVTERFKERLVEEGYNPSYGARPLRRAVMRLLEDSLAEEVLSGKIKAG 796
Query: 661 DSVIVDVDSDGNVTVLNG 678
DS +VDV ++G VTVL G
Sbjct: 797 DSAVVDVTNEGEVTVLLG 814
>gi|33861644|ref|NP_893205.1| ClpC [Prochlorococcus marinus subsp. pastoris str. CCMP1986]
gi|33634221|emb|CAE19547.1| ClpC [Prochlorococcus marinus subsp. pastoris str. CCMP1986]
Length = 842
Score = 1009 bits (2610), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 501/700 (71%), Positives = 597/700 (85%), Gaps = 15/700 (2%)
Query: 1 MVGESTEAVGAGVGGGSSGN-KMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 59
M+GE+ E VG+G G + GN K TL+E+GTNLTKLA E KLDPVVGR +I+RV+QILG
Sbjct: 141 MLGETAE-VGSG-GSSNKGNLKTATLDEFGTNLTKLASESKLDPVVGRYAEIDRVIQILG 198
Query: 60 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 119
RRTKNNP LIGEPGVGKTAIAEGLAQRI G++PD +E K+V+TLD+GLLVAGTKYRGEF
Sbjct: 199 RRTKNNPVLIGEPGVGKTAIAEGLAQRIQLGEIPDILEDKRVLTLDIGLLVAGTKYRGEF 258
Query: 120 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 179
EERLKK+MEEIK + +IL IDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTL
Sbjct: 259 EERLKKIMEEIKSAGNVILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTL 318
Query: 180 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 239
DEYRKHIE+D ALERRFQPV V EPS+ +TI+ILKGLRERYE HH+L+ TD AL +AA L
Sbjct: 319 DEYRKHIERDAALERRFQPVMVGEPSIADTIEILKGLRERYEQHHRLKITDNALEAAAHL 378
Query: 240 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 299
+YISDRFLPDKAIDLIDEAGSRVRL +++LP EA++++KELRQ+ K+K E+VR Q+F+
Sbjct: 379 GDRYISDRFLPDKAIDLIDEAGSRVRLINSKLPPEAKQIDKELRQVQKQKEESVRDQNFD 438
Query: 300 KAGELRDREMDLKAQISALVDKGKEMSKAE--------TEAGDV---GPVVTEVDIQHIV 348
+AG LR++E++L A+I L++ KE S+ TE P+V+E D+ HIV
Sbjct: 439 QAGVLREKEIELSAKIKELLENKKESSEKNEISNANETTENNSTIIHDPLVSEEDVAHIV 498
Query: 349 SAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIAS 408
++WTG+PV+K++ ES +LL MEETLH+R+IGQDEAVKA+S+AIRRARVGL+NPNRPIAS
Sbjct: 499 ASWTGVPVQKLTETESVKLLNMEETLHQRLIGQDEAVKAVSKAIRRARVGLQNPNRPIAS 558
Query: 409 FIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGG 468
FIFSGPTGVGK+EL K+LA+Y+FGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVG+ EGG
Sbjct: 559 FIFSGPTGVGKTELTKSLASYFFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGFNEGG 618
Query: 469 QLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNV 528
QLTEAVRRRPYTVVLFDE+EKAHPDVFN++LQ+LEDGRLTDSKGRTVDFKNTLLIMTSN+
Sbjct: 619 QLTEAVRRRPYTVVLFDEVEKAHPDVFNLLLQLLEDGRLTDSKGRTVDFKNTLLIMTSNI 678
Query: 529 GSSVIEKGGRRIGFDLDYDE-KDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTK 587
GS VIEKGG +GF+ D +DS YNRIKSLV EELKQYFRPEFLNRLDE+IVFRQL+K
Sbjct: 679 GSKVIEKGGGGLGFEFSGDSVEDSQYNRIKSLVNEELKQYFRPEFLNRLDEIIVFRQLSK 738
Query: 588 LEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDS 647
EVK+IA+IMLKEVF RL K I+L VT+ F+ER+VEEGYNP+YGARPLRRA+MRLLEDS
Sbjct: 739 NEVKDIAEIMLKEVFSRLNEKGIKLDVTDAFKERLVEEGYNPAYGARPLRRAVMRLLEDS 798
Query: 648 MAEKMLAREIKEGDSVIVDVDSDGNVTVLNGSSGAPESLA 687
+AE++L+ IK+GD IVD+D + V V + + + LA
Sbjct: 799 LAEEVLSGRIKDGDKAIVDIDENKKVIVNISTEESSQELA 838
>gi|318040228|ref|ZP_07972184.1| ATPase [Synechococcus sp. CB0101]
Length = 853
Score = 1009 bits (2609), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 510/710 (71%), Positives = 598/710 (84%), Gaps = 24/710 (3%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
M+GE+ E V +G GGG K PTL+E+G+NLT+ A +GKLDPVVGRQ +IERV+QILGR
Sbjct: 141 MLGETAE-VASGGGGGKGSTKTPTLDEFGSNLTQQAADGKLDPVVGRQHEIERVIQILGR 199
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNP LIGEPGVGKTAIAEGLAQRI SGDVPD +E K+V+TLD+GLLVAGTKYRGEFE
Sbjct: 200 RTKNNPVLIGEPGVGKTAIAEGLAQRINSGDVPDILEDKRVLTLDIGLLVAGTKYRGEFE 259
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
ERLKK+MEEI+ + +IL IDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTLD
Sbjct: 260 ERLKKIMEEIRGAGNVILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLD 319
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRKHIE+D ALERRFQPV+V EPSVD+TI+IL+GL+ERYE HH+L DEALV+AA L
Sbjct: 320 EYRKHIERDAALERRFQPVQVGEPSVDDTIEILRGLKERYEAHHRLTIADEALVAAATLG 379
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
+YISDRFLPDKAIDLIDEAGSRVRL +++LP A+E++K+LR + KEK +AVR QDF K
Sbjct: 380 DRYISDRFLPDKAIDLIDEAGSRVRLMNSKLPPAAKEVDKQLRAVQKEKEDAVREQDFTK 439
Query: 301 AGELRDREMDLKAQISALVDKGKEMSKAE-TEAG---------------------DVGPV 338
AGELRD+E++L+ QI +++ KE +A+ EAG D P+
Sbjct: 440 AGELRDKEVELRDQIRSILQTRKEEPEAQVAEAGSEATAETSAPAATAVAEAPADDRTPM 499
Query: 339 VTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVG 398
VTE DI IV++WTG+PV+K++ ES +LL MEETLH+R+IGQDEAVKA+SRAIRRARVG
Sbjct: 500 VTEEDIAQIVASWTGVPVQKLTESESAKLLNMEETLHQRLIGQDEAVKAVSRAIRRARVG 559
Query: 399 LKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSP 458
LKNPNRPIASFIFSGPTGVGK+EL K+LAAY+FGSEEAMIRLDMSEFMERHTVSKLIGSP
Sbjct: 560 LKNPNRPIASFIFSGPTGVGKTELTKSLAAYFFGSEEAMIRLDMSEFMERHTVSKLIGSP 619
Query: 459 PGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFK 518
PGYVG+ EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFN++LQ+LEDGRLTDSKGRTVDFK
Sbjct: 620 PGYVGFNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNLLLQLLEDGRLTDSKGRTVDFK 679
Query: 519 NTLLIMTSNVGSSVIEKGGRRIGFDLD-YDEKDSSYNRIKSLVTEELKQYFRPEFLNRLD 577
NTL+IMTSN+GS VIEKGG +GF+ D ++++YNRI+SLV EELKQYFRPEFLNRLD
Sbjct: 680 NTLIIMTSNIGSKVIEKGGGGLGFEFSGADAEETNYNRIRSLVNEELKQYFRPEFLNRLD 739
Query: 578 EMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLR 637
E+IVFRQL++ EVKEIA+IMLKEVF R+ K I L VTE F+ER+VEEGYNPSYGARPLR
Sbjct: 740 EIIVFRQLSRDEVKEIAEIMLKEVFSRMSEKGIHLSVTEAFKERLVEEGYNPSYGARPLR 799
Query: 638 RAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNGSSGAPESLA 687
RA+MRLLEDS+AE+ L+ I EGDS +VDVD + V + A +LA
Sbjct: 800 RAVMRLLEDSLAEEFLSGRIGEGDSAVVDVDDNKQVVIRKQGEAAIPALA 849
>gi|90994524|ref|YP_537014.1| Clp protease ATP binding subunit [Pyropia yezoensis]
gi|122194672|sp|Q1XDF4.1|CLPC_PORYE RecName: Full=ATP-dependent Clp protease ATP-binding subunit clpA
homolog
gi|90819088|dbj|BAE92457.1| Clp protease ATP binding subunit [Pyropia yezoensis]
Length = 821
Score = 1009 bits (2609), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 496/678 (73%), Positives = 586/678 (86%), Gaps = 4/678 (0%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
M+GE+ EA +G + +K PTLEE+G+NLT++A EG LDPVVGRQ +IERV+QILGR
Sbjct: 141 MLGENAEANVSGSNTTQARSKTPTLEEFGSNLTQMAMEGGLDPVVGRQKEIERVIQILGR 200
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNP LIGEPGVGKTAIAEGLAQRIA+ DVP +E K VITLD+GLLVAGTKYRGEFE
Sbjct: 201 RTKNNPVLIGEPGVGKTAIAEGLAQRIANRDVPSILEDKLVITLDVGLLVAGTKYRGEFE 260
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
ERLK++M+EIK +D +IL IDEVHTLIGAGAAEGAIDAAN+LKP+LARGELQCIGATTL+
Sbjct: 261 ERLKRIMDEIKSADNVILVIDEVHTLIGAGAAEGAIDAANLLKPALARGELQCIGATTLE 320
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRKHIEKDPALERRFQPV V EPSV+ETI+IL GLR+RYE HH+L +D AL +AA+ +
Sbjct: 321 EYRKHIEKDPALERRFQPVVVGEPSVEETIEILFGLRDRYEKHHQLTMSDGALAAAAKYA 380
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
QYISDRFLPDKAIDLIDEAGSRVRL ++QLP AREL+KELR + K K+EA+R Q +E
Sbjct: 381 NQYISDRFLPDKAIDLIDEAGSRVRLLNSQLPPAARELDKELRAVLKTKDEAIRAQKYET 440
Query: 301 AGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVS 360
A + R REM++KAQI+A+ K E PVVTE DI IV+AWTGIPV K++
Sbjct: 441 AEQYRAREMEIKAQIAAIAQSKKNEPDLNLE----DPVVTEDDIAEIVAAWTGIPVTKLT 496
Query: 361 TDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 420
ES++L+ MEETLH R+IGQDEAV A+SRAIRRARVGLKNPNRPIASFIFSGPTGVGK+
Sbjct: 497 KSESEKLMHMEETLHGRIIGQDEAVVAVSRAIRRARVGLKNPNRPIASFIFSGPTGVGKT 556
Query: 421 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 480
EL KALA+Y+FGSE +MIRLDMSE+MERHTVSKLIGSPPGYVGY+EGG LTEAVR++PYT
Sbjct: 557 ELTKALASYFFGSEASMIRLDMSEYMERHTVSKLIGSPPGYVGYSEGGYLTEAVRKKPYT 616
Query: 481 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI 540
V+LFDEIEKAHPD+FN++LQILEDGRLTD+KGRT+DFKNTLLIMTSN+GS VIEKGG +
Sbjct: 617 VILFDEIEKAHPDIFNLLLQILEDGRLTDAKGRTIDFKNTLLIMTSNIGSKVIEKGGGSL 676
Query: 541 GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 600
GF+L D+ +S Y R++SLV EELKQYFRPEFLNRLDE+IVFRQLTK EV+EIA++ML E
Sbjct: 677 GFELSEDQTESQYTRVRSLVNEELKQYFRPEFLNRLDEIIVFRQLTKDEVREIAELMLNE 736
Query: 601 VFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEG 660
VF R+K +DI+L VTERF++R+VEEGYNPSYGARPLRRA+MRLLEDS+AE++L+ +IK G
Sbjct: 737 VFARIKQQDIQLNVTERFKQRLVEEGYNPSYGARPLRRAVMRLLEDSLAEEVLSGKIKAG 796
Query: 661 DSVIVDVDSDGNVTVLNG 678
DS +VDV ++G VTVL G
Sbjct: 797 DSAVVDVTNEGEVTVLLG 814
>gi|67920889|ref|ZP_00514408.1| UvrB/UvrC protein:AAA ATPase, central region:Clp, N terminal:Clp, N
terminal [Crocosphaera watsonii WH 8501]
gi|67857006|gb|EAM52246.1| UvrB/UvrC protein:AAA ATPase, central region:Clp, N terminal:Clp, N
terminal [Crocosphaera watsonii WH 8501]
Length = 823
Score = 1009 bits (2608), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 499/684 (72%), Positives = 592/684 (86%), Gaps = 12/684 (1%)
Query: 2 VGESTEAVGAGVGGGSSG-NKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
+GE+ E GGG+ G K PTL+E+G+NLT+LA EG+LDPVVGRQ +IERV+QILGR
Sbjct: 142 LGETAEVAA---GGGTPGRTKTPTLDEFGSNLTQLAGEGQLDPVVGRQKEIERVIQILGR 198
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNP LIGEPGVGKTAIAEGLAQRIA+ D+PD +E K+V+TLD+GLLVAGTKYRGEFE
Sbjct: 199 RTKNNPVLIGEPGVGKTAIAEGLAQRIANKDIPDILEEKRVVTLDIGLLVAGTKYRGEFE 258
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
ERLKK+M+EI+Q+ +IL IDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTLD
Sbjct: 259 ERLKKIMDEIRQAGNVILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLD 318
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRKHIE+D ALERRFQPV V EPSVDET++IL GLRERYE HHKL+ DEAL +AA+LS
Sbjct: 319 EYRKHIERDAALERRFQPVMVGEPSVDETVEILFGLRERYEQHHKLKILDEALDAAAKLS 378
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
+YISDR+LPDKAIDLIDEAGSRVRL ++QLP A+EL+KELR I K+K++AVR QDF++
Sbjct: 379 DRYISDRYLPDKAIDLIDEAGSRVRLINSQLPPAAKELDKELRTILKQKDDAVRSQDFDR 438
Query: 301 AGELRDREMDLKAQISALVDKGKEMSKAETEAGDVG-PVVTEVDIQHIVSAWTGIPVEKV 359
AGELRD+EMD+K QI + +S A+ GD P V +I IV++WTG+PV K+
Sbjct: 439 AGELRDQEMDIKEQI-------RSISTAKKGEGDSAEPFVDAEEIAQIVASWTGVPVNKL 491
Query: 360 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 419
+ ES++LL ME+TLH+R+IGQ++AVKA+SRAIRRARVGLKNPNRPIASF+FSGPTGVGK
Sbjct: 492 TETESEKLLHMEDTLHQRLIGQEDAVKAVSRAIRRARVGLKNPNRPIASFVFSGPTGVGK 551
Query: 420 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 479
+EL K+LAAY+FGSEEAMIRLDMSE+MERHTVSKLIGSPPGYVGY EGGQLTEAVRRRPY
Sbjct: 552 TELTKSLAAYFFGSEEAMIRLDMSEYMERHTVSKLIGSPPGYVGYNEGGQLTEAVRRRPY 611
Query: 480 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 539
TVVLFDEIEKAHPDVFNM+LQILEDGRLTD+KGRTVDFKNTLLIMTSN+GS VIEKGG
Sbjct: 612 TVVLFDEIEKAHPDVFNMLLQILEDGRLTDAKGRTVDFKNTLLIMTSNIGSKVIEKGGGG 671
Query: 540 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 599
+GF+ + D+ ++ YNRI++LV EELKQYFRPEFLNRLDE+IVFRQL K EVKEI++I+LK
Sbjct: 672 LGFEFEDDQNEAQYNRIRNLVNEELKQYFRPEFLNRLDEIIVFRQLNKEEVKEISEILLK 731
Query: 600 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 659
EVF RL K+I LQVT++F+ER+VEEGYNP+YGARPLRRAIMRLLED +AE++L+ + E
Sbjct: 732 EVFARLTEKEITLQVTDKFKERLVEEGYNPAYGARPLRRAIMRLLEDVLAEEILSGRVGE 791
Query: 660 GDSVIVDVDSDGNVTVLNGSSGAP 683
GD +VD+ DG V V++ P
Sbjct: 792 GDVAVVDIGEDGKVQVVSNEKQQP 815
>gi|126657032|ref|ZP_01728203.1| ATP-dependent Clp protease regulatory subunit [Cyanothece sp.
CCY0110]
gi|126621575|gb|EAZ92285.1| ATP-dependent Clp protease regulatory subunit [Cyanothece sp.
CCY0110]
Length = 822
Score = 1009 bits (2608), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 498/680 (73%), Positives = 592/680 (87%), Gaps = 10/680 (1%)
Query: 2 VGESTEAVGAGVGGGSSG-NKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
+GE+ E GGG+ G K PTL+E+G+NLT+LA +G+LDPVVGRQ +IERV+QILGR
Sbjct: 142 LGETAEVAA---GGGTPGRTKTPTLDEFGSNLTQLAADGQLDPVVGRQKEIERVIQILGR 198
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNP LIGEPGVGKTAIAEGLAQRIA+ D+PD +E K+V+TLD+GLLVAGTKYRGEFE
Sbjct: 199 RTKNNPVLIGEPGVGKTAIAEGLAQRIANKDIPDILEEKRVVTLDIGLLVAGTKYRGEFE 258
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
ERLKK+M+EI+Q+ +IL IDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTLD
Sbjct: 259 ERLKKIMDEIRQAGNVILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLD 318
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRKHIE+D ALERRFQPV V EPSVDETI+IL GLRERYE HHKL+ DEAL +AA+LS
Sbjct: 319 EYRKHIERDAALERRFQPVMVGEPSVDETIEILYGLRERYEQHHKLKILDEALEAAAKLS 378
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
+YISDR+LPDKAIDLIDEAGSRVRL ++QLP A+EL+KELR I K+K++AVR QDF++
Sbjct: 379 DRYISDRYLPDKAIDLIDEAGSRVRLINSQLPPAAKELDKELRTILKQKDDAVRSQDFDR 438
Query: 301 AGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVS 360
AGELRD+EMD+K QI ++ K E E + P V +I HIV++WTG+PV K++
Sbjct: 439 AGELRDQEMDIKEQIRSI----SSAKKGEGENDE--PFVDAEEIAHIVASWTGVPVNKLT 492
Query: 361 TDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 420
ES++LL ME+TLH+R+IGQ++AVKA+SRAIRRARVGLKNPNRPIASF+FSGPTGVGK+
Sbjct: 493 ETESEKLLHMEDTLHQRLIGQEDAVKAVSRAIRRARVGLKNPNRPIASFVFSGPTGVGKT 552
Query: 421 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 480
EL KALA Y+FGSE+AMIRLDMSE+MERHTVSKLIGSPPGYVGY EGGQLTEAVRRRPYT
Sbjct: 553 ELTKALATYFFGSEDAMIRLDMSEYMERHTVSKLIGSPPGYVGYNEGGQLTEAVRRRPYT 612
Query: 481 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI 540
VVLFDEIEKAHPDVFNM+LQILEDGRLTD+KGRTVDFKNTLLIMTSN+GS VIEKGG +
Sbjct: 613 VVLFDEIEKAHPDVFNMLLQILEDGRLTDAKGRTVDFKNTLLIMTSNIGSKVIEKGGGGL 672
Query: 541 GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 600
GF+ + D+ ++ YNRI++LV EELKQYFRPEFLNRLDE+IVFRQL K EVKEI++I+LKE
Sbjct: 673 GFEFEDDQNEAQYNRIRNLVNEELKQYFRPEFLNRLDEIIVFRQLNKEEVKEISEILLKE 732
Query: 601 VFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEG 660
VF RL K+I LQVT++F+ER+VEEGYNP+YGARPLRRAIMRLLED +AE++L+ + EG
Sbjct: 733 VFARLTEKEITLQVTDKFKERLVEEGYNPAYGARPLRRAIMRLLEDVLAEEILSGRVGEG 792
Query: 661 DSVIVDVDSDGNVTVLNGSS 680
D +VD+ DG V V++G +
Sbjct: 793 DIAVVDIGEDGKVKVVSGDT 812
>gi|172039160|ref|YP_001805661.1| ATP-dependent Clp protease regulatory subunit [Cyanothece sp. ATCC
51142]
gi|354552562|ref|ZP_08971870.1| ATPase AAA-2 domain protein [Cyanothece sp. ATCC 51472]
gi|171700614|gb|ACB53595.1| ATP-dependent Clp protease, regulatory subunit [Cyanothece sp. ATCC
51142]
gi|353555884|gb|EHC25272.1| ATPase AAA-2 domain protein [Cyanothece sp. ATCC 51472]
Length = 822
Score = 1008 bits (2605), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 497/680 (73%), Positives = 592/680 (87%), Gaps = 10/680 (1%)
Query: 2 VGESTEAVGAGVGGGSSG-NKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
+GE+ E GGG+ G K PTL+E+G+NLT+LA +G+LDPVVGRQ +IERV+QILGR
Sbjct: 142 LGETAEVAA---GGGTPGRTKTPTLDEFGSNLTQLAADGQLDPVVGRQKEIERVIQILGR 198
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNP LIGEPGVGKTAIAEGLAQRIA+ D+PD +E K+V+TLD+GLLVAGTKYRGEFE
Sbjct: 199 RTKNNPVLIGEPGVGKTAIAEGLAQRIANKDIPDILEEKRVVTLDIGLLVAGTKYRGEFE 258
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
ERLKK+M+EI+Q+ +IL IDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTLD
Sbjct: 259 ERLKKIMDEIRQAGNVILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLD 318
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRKHIE+D ALERRFQPV V EPSV+ETI+IL GLRERYE HHKL+ DEAL +AA+LS
Sbjct: 319 EYRKHIERDAALERRFQPVMVGEPSVEETIEILYGLRERYEQHHKLKILDEALEAAAKLS 378
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
+YISDR+LPDKAIDLIDEAGSRVRL ++QLP A+EL+KELR I K+K++AVR QDF++
Sbjct: 379 DRYISDRYLPDKAIDLIDEAGSRVRLINSQLPPAAKELDKELRTILKQKDDAVRSQDFDR 438
Query: 301 AGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVS 360
AGELRD+EMD+K QI ++ K E E + P V +I HIV++WTG+PV K++
Sbjct: 439 AGELRDQEMDIKEQIRSI----SSAKKGEGENDE--PFVDSEEIAHIVASWTGVPVNKLT 492
Query: 361 TDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 420
ES++LL ME+TLH+R+IGQ++AVKA+SRAIRRARVGLKNPNRPIASF+FSGPTGVGK+
Sbjct: 493 ETESEKLLHMEDTLHQRLIGQEDAVKAVSRAIRRARVGLKNPNRPIASFVFSGPTGVGKT 552
Query: 421 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 480
EL KALA Y+FGSEEAMIRLDMSE+MERHTVSKLIGSPPGYVGY EGGQLTEAVRRRPYT
Sbjct: 553 ELTKALATYFFGSEEAMIRLDMSEYMERHTVSKLIGSPPGYVGYNEGGQLTEAVRRRPYT 612
Query: 481 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI 540
VVLFDEIEKAHPDVFNM+LQILEDGRLTD+KGRTVDFKNTLLIMTSN+GS VIEKGG +
Sbjct: 613 VVLFDEIEKAHPDVFNMLLQILEDGRLTDAKGRTVDFKNTLLIMTSNIGSKVIEKGGGGL 672
Query: 541 GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 600
GF+ + D+ ++ YNRI++LV EELKQYFRPEFLNRLDE+IVFRQL K EVK+I++I+LKE
Sbjct: 673 GFEFEDDQNEAQYNRIRNLVNEELKQYFRPEFLNRLDEIIVFRQLNKEEVKQISEILLKE 732
Query: 601 VFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEG 660
VF RL K+I LQVT++F+ER+VEEGYNP+YGARPLRRAIMRLLED +AE++L+ + EG
Sbjct: 733 VFARLTEKEITLQVTDKFKERLVEEGYNPAYGARPLRRAIMRLLEDVLAEEILSGRVGEG 792
Query: 661 DSVIVDVDSDGNVTVLNGSS 680
D +VD+ DG V V++G +
Sbjct: 793 DVAVVDIGEDGKVKVVSGDT 812
>gi|170076773|ref|YP_001733411.1| endopeptidase Clp, ATP-binding subunit C [Synechococcus sp. PCC
7002]
gi|169884442|gb|ACA98155.1| endopeptidase Clp, ATP-binding chain C, protease regulatory subunit
[Synechococcus sp. PCC 7002]
Length = 821
Score = 1007 bits (2604), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 502/675 (74%), Positives = 595/675 (88%), Gaps = 8/675 (1%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
M+GE+ E V AG GG S NK PTL+E+G+NLT+LA++GKLDPVVGRQ +IERV+QILGR
Sbjct: 141 MLGETAE-VAAG-GGSSRSNKTPTLDEFGSNLTQLAKDGKLDPVVGRQNEIERVIQILGR 198
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNP LIGEPGVGKTAIAEGLAQRI++GDVPD +E K+V+TLD+GLLVAGTKYRGEFE
Sbjct: 199 RTKNNPVLIGEPGVGKTAIAEGLAQRISNGDVPDILEEKRVVTLDIGLLVAGTKYRGEFE 258
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
ERLKK+M+EI+Q+ +IL IDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTLD
Sbjct: 259 ERLKKIMDEIRQAGNVILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLD 318
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRKHIE+D ALERRFQPV V EPSV+ETI+IL GLRERYE HHKL+ DEAL +AA+L+
Sbjct: 319 EYRKHIERDAALERRFQPVMVGEPSVEETIEILFGLRERYEQHHKLKILDEALDAAAKLA 378
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
+YISDRFLPDKAIDLIDEAGSRVRL ++QLP EA+EL+KELR + K+K+EAVR QDF+K
Sbjct: 379 DRYISDRFLPDKAIDLIDEAGSRVRLINSQLPPEAKELDKELRDVLKQKDEAVRSQDFDK 438
Query: 301 AGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVS 360
AGELRDREM++K +I A+ KE + D+ VV +I HIV++WTG+P+ K++
Sbjct: 439 AGELRDREMEIKTEIRAIAASQKEKN------SDIDAVVDAEEIAHIVASWTGVPLNKLT 492
Query: 361 TDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 420
ES +LL ME+TLH+R+IGQ++AVKA+SRAIRRARVGLKNPNRPIASF+FSGPTGVGK+
Sbjct: 493 ESESTKLLNMEDTLHQRLIGQEDAVKAVSRAIRRARVGLKNPNRPIASFVFSGPTGVGKT 552
Query: 421 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 480
EL KALAAY+FGSE+AMIRLDMSEFMERHTVSKLIGSPPGYVGY EGGQLTEAVRRRPYT
Sbjct: 553 ELTKALAAYFFGSEDAMIRLDMSEFMERHTVSKLIGSPPGYVGYNEGGQLTEAVRRRPYT 612
Query: 481 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI 540
V+LFDEIEKAHPD+FNM+LQILEDGRLTD+KGRTVDFKNTL+I+TSN+GS VIEKGG +
Sbjct: 613 VILFDEIEKAHPDIFNMLLQILEDGRLTDAKGRTVDFKNTLIILTSNIGSKVIEKGGGGL 672
Query: 541 GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 600
GF+ D +S YNRI+SLV EELKQYFRPEFLNRLDE+IVFRQL K EVKEI++I+LK+
Sbjct: 673 GFEFGEDAAESQYNRIRSLVNEELKQYFRPEFLNRLDEIIVFRQLNKEEVKEISEILLKD 732
Query: 601 VFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEG 660
VF RL ++IELQVT++F+ER+VEEGYNPSYGARPLRRAIMRLLED +AE++L+ + G
Sbjct: 733 VFKRLTEQEIELQVTDKFKERLVEEGYNPSYGARPLRRAIMRLLEDVLAEEILSGRVGSG 792
Query: 661 DSVIVDVDSDGNVTV 675
D+ IVD++ +G V V
Sbjct: 793 DTAIVDINEEGKVAV 807
>gi|218246261|ref|YP_002371632.1| ATPase AAA [Cyanothece sp. PCC 8801]
gi|218166739|gb|ACK65476.1| ATPase AAA-2 domain protein [Cyanothece sp. PCC 8801]
Length = 822
Score = 1007 bits (2603), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 502/676 (74%), Positives = 591/676 (87%), Gaps = 10/676 (1%)
Query: 2 VGESTEAVGAGVGGGSSG-NKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
+GE+ E GGG+SG K PTL+E+G+NLT LA EGKLDPVVGRQ +IERV+QILGR
Sbjct: 142 LGETAEVAA---GGGTSGRTKTPTLDEFGSNLTNLAGEGKLDPVVGRQKEIERVIQILGR 198
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNP LIGEPGVGKTAIAEGLAQRIA+ DVPD +E K+V+TLD+GLLVAGTKYRGEFE
Sbjct: 199 RTKNNPVLIGEPGVGKTAIAEGLAQRIANKDVPDILEDKRVVTLDIGLLVAGTKYRGEFE 258
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
ERLKK+M+EI+Q+ +IL IDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTLD
Sbjct: 259 ERLKKIMDEIRQAGNVILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLD 318
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRKHIE+D ALERRFQPV V EP+VDETI+IL GLRERYE HHKL+ DEAL +AA+LS
Sbjct: 319 EYRKHIERDAALERRFQPVMVGEPTVDETIEILYGLRERYEQHHKLKILDEALEAAAKLS 378
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
+YISDR+LPDKAIDLIDEAGSRVRL ++QLP A+EL+KELR I K+K++AVR QDF+K
Sbjct: 379 DRYISDRYLPDKAIDLIDEAGSRVRLINSQLPPAAKELDKELRGILKQKDDAVRAQDFDK 438
Query: 301 AGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVS 360
AGELRDREM++KA+I A+ S + E + P V +I HIV++WTG+PV K++
Sbjct: 439 AGELRDREMEIKAEIRAI------SSSKKAEGDNDEPFVDAEEIAHIVASWTGVPVNKLT 492
Query: 361 TDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 420
ES++LL ME+TLH+R+IGQ++AVKA+SRAIRRARVGLKNPNRPIASF+FSGPTGVGK+
Sbjct: 493 ETESEKLLHMEDTLHQRLIGQEDAVKAVSRAIRRARVGLKNPNRPIASFVFSGPTGVGKT 552
Query: 421 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 480
EL KALAAY+FGSE+AMIRLDMSE+MERHTVSKLIGSPPGYVGY EGGQLTEAVRRRPYT
Sbjct: 553 ELTKALAAYFFGSEDAMIRLDMSEYMERHTVSKLIGSPPGYVGYNEGGQLTEAVRRRPYT 612
Query: 481 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI 540
VVLFDEIEKAHPDVFNM+LQILEDGRLTD+KGRTVDFKNTLLIMTSN+GS VIEKGG +
Sbjct: 613 VVLFDEIEKAHPDVFNMLLQILEDGRLTDAKGRTVDFKNTLLIMTSNIGSKVIEKGGGGL 672
Query: 541 GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 600
GF+ + ++ ++ YNRI+SLV EELK YFRPEFLNRLDE+IVFRQL K EVKEI++I+LKE
Sbjct: 673 GFEFEENQNEAQYNRIRSLVNEELKNYFRPEFLNRLDEIIVFRQLNKEEVKEISEILLKE 732
Query: 601 VFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEG 660
VF RL K I LQVT++F+ER+VEEGYNP+YGARPLRRAIMRLLED +AE++L+ + EG
Sbjct: 733 VFKRLTEKHINLQVTDKFKERLVEEGYNPAYGARPLRRAIMRLLEDVLAEEILSGRVGEG 792
Query: 661 DSVIVDVDSDGNVTVL 676
D+ +VD+D DG V V+
Sbjct: 793 DTAMVDIDEDGKVKVI 808
>gi|427722144|ref|YP_007069421.1| ATPase [Leptolyngbya sp. PCC 7376]
gi|427353864|gb|AFY36587.1| ATPase AAA-2 domain protein [Leptolyngbya sp. PCC 7376]
Length = 820
Score = 1006 bits (2601), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 500/675 (74%), Positives = 595/675 (88%), Gaps = 8/675 (1%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
M+GE+ E V AG GGS NK PTL+E+G+NLT+LA++ KLDPVVGRQ +IERV+QILGR
Sbjct: 141 MLGETAE-VAAG-SGGSRSNKTPTLDEFGSNLTQLAKDSKLDPVVGRQKEIERVIQILGR 198
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNP LIGEPGVGKTAIAEGLAQRI++GDVPD +E K+V+TLD+GLLVAGTKYRGEFE
Sbjct: 199 RTKNNPVLIGEPGVGKTAIAEGLAQRISTGDVPDILEEKRVVTLDIGLLVAGTKYRGEFE 258
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
ERLKK+M+E++Q+ +IL IDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTLD
Sbjct: 259 ERLKKIMDEVRQAGNVILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLD 318
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRKHIE+D ALERRFQPV V EPSV+ETI+IL GLRERYE HHKL+ DEAL +AA+L+
Sbjct: 319 EYRKHIERDAALERRFQPVMVGEPSVEETIEILFGLRERYEQHHKLKILDEALDAAAKLA 378
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
+YISDRFLPDKAIDLIDEAGSRVRL ++QLP EA+EL+KELR + KEK+EAVR Q+F+K
Sbjct: 379 DRYISDRFLPDKAIDLIDEAGSRVRLINSQLPAEAKELDKELRGVLKEKDEAVRSQEFDK 438
Query: 301 AGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVS 360
AGELRDREM +KA+I A+ KE + D+ VV +I HIV++WTG+P+ K++
Sbjct: 439 AGELRDREMSIKAEIRAIAASQKE------KKTDIDAVVDAEEIAHIVASWTGVPLNKLT 492
Query: 361 TDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 420
ES +LL ME+TLH+R+IGQ+EAV+A+SRAIRRARVGLKNPNRPIASF+FSGPTGVGK+
Sbjct: 493 ESESTKLLNMEDTLHQRLIGQEEAVRAVSRAIRRARVGLKNPNRPIASFVFSGPTGVGKT 552
Query: 421 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 480
EL K+LAAY+FGSE+AMIRLDMSEFMERHTVSKLIGSPPGYVGY EGGQLTEAVRRRPYT
Sbjct: 553 ELTKSLAAYFFGSEDAMIRLDMSEFMERHTVSKLIGSPPGYVGYNEGGQLTEAVRRRPYT 612
Query: 481 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI 540
V+LFDEIEKAHPD+FNM+LQILEDGRLTD+KGRTVDFKNTL+I+TSN+GS VIEKGG +
Sbjct: 613 VILFDEIEKAHPDIFNMLLQILEDGRLTDAKGRTVDFKNTLIILTSNIGSKVIEKGGGGL 672
Query: 541 GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 600
GF+ D +S YNRI+SLV EELKQYFRPEFLNRLDE+IVFRQLTK EVKEI++I+LK+
Sbjct: 673 GFEFGDDAAESQYNRIRSLVNEELKQYFRPEFLNRLDEIIVFRQLTKDEVKEISEILLKD 732
Query: 601 VFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEG 660
VF RL ++IELQVTE+F+ER+VEEGYNP+YGARPLRRAIMRLLED +AE++L+ + G
Sbjct: 733 VFQRLTEQEIELQVTEKFKERLVEEGYNPAYGARPLRRAIMRLLEDVLAEEILSGRVSSG 792
Query: 661 DSVIVDVDSDGNVTV 675
D+ +VD++ +G V V
Sbjct: 793 DTALVDINEEGKVAV 807
>gi|149071968|ref|YP_001293474.1| Clp protease ATP binding subunit [Rhodomonas salina]
gi|134302919|gb|ABO70723.1| Clp protease ATP binding subunit [Rhodomonas salina]
Length = 819
Score = 1006 bits (2601), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 493/662 (74%), Positives = 576/662 (87%), Gaps = 11/662 (1%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
++G++ E GGG + K PTLEE+GTNLT+ A EGKLDPV+GRQ +IERV+QILGR
Sbjct: 141 LLGDTAEVTA---GGGQNKGKTPTLEEFGTNLTQKAAEGKLDPVIGRQKEIERVIQILGR 197
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNP LIGEPGVGKTAIAEGLAQRI + DVPD +E K+V+TLD+GLLVAGTKYRGEFE
Sbjct: 198 RTKNNPILIGEPGVGKTAIAEGLAQRITNRDVPDILEDKRVVTLDIGLLVAGTKYRGEFE 257
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
ERLKK+++EI+ ++ +IL IDEVHTLIGAGAAEGAIDAANILKP+LARGE+QCIGATTL+
Sbjct: 258 ERLKKIIDEIRVANNVILVIDEVHTLIGAGAAEGAIDAANILKPALARGEMQCIGATTLE 317
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRKHIEKD ALERRFQPV V EPSV+ETI+IL GLR+RYE HHKL +DEAL +AA+ +
Sbjct: 318 EYRKHIEKDSALERRFQPVMVGEPSVEETIEILYGLRDRYEKHHKLVISDEALSAAAKFA 377
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
QYI+DRFLPDKAIDLIDEAGSRVRL H+QLP AREL+KELR+I K+K+EAVRGQDFE
Sbjct: 378 DQYIADRFLPDKAIDLIDEAGSRVRLMHSQLPPAARELDKELREILKQKDEAVRGQDFEV 437
Query: 301 AGELRDREMDLKAQISALVD--KGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEK 358
AG+LRDREM++KAQI+A+ KG+E + E VVTE DI IV+AWTGIPV K
Sbjct: 438 AGQLRDREMEIKAQIAAIAQSKKGEEDTSKEV------SVVTEEDIAQIVAAWTGIPVNK 491
Query: 359 VSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVG 418
++ ES++LL ME+TLH R+IGQDEAV A+S+AIRRARVGLKNPNRPIASFIFSGPTGVG
Sbjct: 492 MTRSESEKLLHMEDTLHGRIIGQDEAVVAVSKAIRRARVGLKNPNRPIASFIFSGPTGVG 551
Query: 419 KSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRP 478
K+EL KALA+Y+FGSEEAM+RLDMSE+MERHTVSKLIGSPPGYVGY EGGQLTE+VRRRP
Sbjct: 552 KTELTKALASYFFGSEEAMVRLDMSEYMERHTVSKLIGSPPGYVGYNEGGQLTESVRRRP 611
Query: 479 YTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR 538
YTVVLFDEIEK HPDVFN++LQILEDGRLTDSKGRTVDFKNTLLI+TSNVGS VIEKGG
Sbjct: 612 YTVVLFDEIEKGHPDVFNLLLQILEDGRLTDSKGRTVDFKNTLLILTSNVGSKVIEKGGG 671
Query: 539 RIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIML 598
+GF+ D+ DS Y RIK+LV EELKQYFRPEFLNRLDE+IVFRQLTK EV EIA+IML
Sbjct: 672 GLGFEFSEDQADSQYGRIKALVNEELKQYFRPEFLNRLDEIIVFRQLTKDEVGEIAEIML 731
Query: 599 KEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIK 658
KEVF R+ K I+L+VT RF+ +++EGYNP YGARPLRRA+MRLLED+++E+ L+ +IK
Sbjct: 732 KEVFTRISEKGIQLEVTARFKTHLIDEGYNPIYGARPLRRAVMRLLEDTLSEEFLSEKIK 791
Query: 659 EG 660
EG
Sbjct: 792 EG 793
>gi|37521633|ref|NP_925010.1| endopeptidase Clp ATP-binding chain [Gloeobacter violaceus PCC
7421]
gi|35212631|dbj|BAC90005.1| endopeptidase Clp ATP-binding chain [Gloeobacter violaceus PCC
7421]
Length = 819
Score = 1006 bits (2600), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 488/676 (72%), Positives = 590/676 (87%), Gaps = 8/676 (1%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
M+GE+ E GG + K PTL+E+G+NLT++A EGKLDPVVGR+ +IERV+QILGR
Sbjct: 141 MLGETAEV---SAGGNTGRTKTPTLDEFGSNLTQMAAEGKLDPVVGREKEIERVIQILGR 197
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNP LIGEPGVGKTAIAEGLAQRI++ D+PD + K+V+TLD+GLLVAGTKYRGEFE
Sbjct: 198 RTKNNPVLIGEPGVGKTAIAEGLAQRISNNDIPDILADKRVVTLDIGLLVAGTKYRGEFE 257
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
ERLKK+M+EI+ + ++L IDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTLD
Sbjct: 258 ERLKKIMDEIRAAGNVVLVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLD 317
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRKHIE+D ALERRFQPV V EP+VDETI+IL+GLRERYE HHKL+ TDEAL++AAQLS
Sbjct: 318 EYRKHIERDAALERRFQPVMVGEPTVDETIEILRGLRERYEQHHKLKITDEALIAAAQLS 377
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
+YISDR+LPDKAIDL+DEAGSRVRL +QLP A+EL+KELRQI KEK++AVRGQD+E+
Sbjct: 378 DRYISDRYLPDKAIDLVDEAGSRVRLLSSQLPPAAKELDKELRQILKEKDDAVRGQDYER 437
Query: 301 AGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVS 360
AGELRDREM++K+QI ++ + K+ET A + P VTE DI +IVS+WTG+PV K++
Sbjct: 438 AGELRDREMEIKSQIRSIA----QARKSET-ANEESPNVTEEDIAYIVSSWTGVPVSKLT 492
Query: 361 TDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 420
E+++LL ME+ LH+R+IGQ+EAVKAISRAIRRARVGLKNP RPIASFIFSGPTGVGK+
Sbjct: 493 ESETEKLLHMEDVLHQRLIGQEEAVKAISRAIRRARVGLKNPKRPIASFIFSGPTGVGKT 552
Query: 421 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 480
ELAK+LA Y+FGSE+AMIRLDMSE+MERHTVSKLIGSPPGYVGY EGGQLTEAVRRRPYT
Sbjct: 553 ELAKSLATYFFGSEDAMIRLDMSEYMERHTVSKLIGSPPGYVGYNEGGQLTEAVRRRPYT 612
Query: 481 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI 540
V+LFDEIEKAHPDVFN++LQILEDGRLTD+KGRTVDFKNTL+IMTSNVGS VIEKGG +
Sbjct: 613 VILFDEIEKAHPDVFNVLLQILEDGRLTDAKGRTVDFKNTLMIMTSNVGSKVIEKGGGGL 672
Query: 541 GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 600
GF+ E++ YNRI LV EELKQYFRPEFLNRLDE+IVF LT+ EVK+IA IML+E
Sbjct: 673 GFNTAGTEEEQRYNRISELVKEELKQYFRPEFLNRLDEIIVFHPLTREEVKQIAVIMLRE 732
Query: 601 VFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEG 660
VF RL+ +++++++T+ F +++EEGY+ +YGARPLRRAI R+LED +AE++LA +KEG
Sbjct: 733 VFARLEEQNMKIEITDAFNRKLIEEGYSATYGARPLRRAIQRMLEDQLAEEILAARLKEG 792
Query: 661 DSVIVDVDSDGNVTVL 676
D+V+VDVDSDG T +
Sbjct: 793 DTVLVDVDSDGKPTFI 808
>gi|257059311|ref|YP_003137199.1| AAA ATPase [Cyanothece sp. PCC 8802]
gi|256589477|gb|ACV00364.1| ATPase AAA-2 domain protein [Cyanothece sp. PCC 8802]
Length = 822
Score = 1006 bits (2600), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 501/676 (74%), Positives = 591/676 (87%), Gaps = 10/676 (1%)
Query: 2 VGESTEAVGAGVGGGSSG-NKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
+GE+ E GGG+SG K PTL+E+G+NLT LA EGKLDPVVGRQ +IERV+QILGR
Sbjct: 142 LGETAEVAA---GGGTSGRTKTPTLDEFGSNLTNLAGEGKLDPVVGRQKEIERVIQILGR 198
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNP LIGEPGVGKTAIAEGLAQRIA+ DVPD +E K+V+TLD+GLLVAGTKYRGEFE
Sbjct: 199 RTKNNPVLIGEPGVGKTAIAEGLAQRIANKDVPDILEDKRVVTLDIGLLVAGTKYRGEFE 258
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
ERLKK+M+EI+Q+ +IL IDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTLD
Sbjct: 259 ERLKKIMDEIRQAGNVILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLD 318
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRKHIE+D ALERRFQPV V EP+V+ETI+IL GLRERYE HHKL+ DEAL +AA+LS
Sbjct: 319 EYRKHIERDAALERRFQPVMVGEPTVNETIEILYGLRERYEQHHKLKILDEALEAAAKLS 378
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
+YISDR+LPDKAIDLIDEAGSRVRL ++QLP A+EL+KELR I K+K++AVR QDF+K
Sbjct: 379 DRYISDRYLPDKAIDLIDEAGSRVRLINSQLPPAAKELDKELRGILKQKDDAVRAQDFDK 438
Query: 301 AGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVS 360
AGELRDREM++KA+I A+ S + E + P V +I HIV++WTG+PV K++
Sbjct: 439 AGELRDREMEIKAEIRAI------SSSKKAEGDNDEPFVDAEEIAHIVASWTGVPVNKLT 492
Query: 361 TDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 420
ES++LL ME+TLH+R+IGQ++AVKA+SRAIRRARVGLKNPNRPIASF+FSGPTGVGK+
Sbjct: 493 ETESEKLLHMEDTLHQRLIGQEDAVKAVSRAIRRARVGLKNPNRPIASFVFSGPTGVGKT 552
Query: 421 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 480
EL KALAAY+FGSE+AMIRLDMSE+MERHTVSKLIGSPPGYVGY EGGQLTEAVRRRPYT
Sbjct: 553 ELTKALAAYFFGSEDAMIRLDMSEYMERHTVSKLIGSPPGYVGYNEGGQLTEAVRRRPYT 612
Query: 481 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI 540
VVLFDEIEKAHPDVFNM+LQILEDGRLTD+KGRTVDFKNTLLIMTSN+GS VIEKGG +
Sbjct: 613 VVLFDEIEKAHPDVFNMLLQILEDGRLTDAKGRTVDFKNTLLIMTSNIGSKVIEKGGGGL 672
Query: 541 GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 600
GF+ + ++ ++ YNRI+SLV EELK YFRPEFLNRLDE+IVFRQL K EVKEI++I+LKE
Sbjct: 673 GFEFEENQNEAQYNRIRSLVNEELKNYFRPEFLNRLDEIIVFRQLNKEEVKEISEILLKE 732
Query: 601 VFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEG 660
VF RL K I LQVT++F+ER+VEEGYNP+YGARPLRRAIMRLLED +AE++L+ + EG
Sbjct: 733 VFKRLTEKHINLQVTDKFKERLVEEGYNPAYGARPLRRAIMRLLEDVLAEEILSGRVGEG 792
Query: 661 DSVIVDVDSDGNVTVL 676
D+ +VD+D DG V V+
Sbjct: 793 DTAMVDIDEDGKVKVI 808
>gi|300864107|ref|ZP_07109004.1| ATPase AAA-2 [Oscillatoria sp. PCC 6506]
gi|300337892|emb|CBN54150.1| ATPase AAA-2 [Oscillatoria sp. PCC 6506]
Length = 823
Score = 1004 bits (2596), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 495/659 (75%), Positives = 574/659 (87%), Gaps = 8/659 (1%)
Query: 1 MVGESTEAVGAGVGGGSSG-NKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 59
M+GE+ E G S+G K PTL+E+G NLT++A +GKLDPVVGRQ +IERV+QILG
Sbjct: 141 MLGETAEVTA----GSSTGRTKTPTLDEFGANLTQMAVDGKLDPVVGRQKEIERVIQILG 196
Query: 60 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 119
RRTKNNP LIGEPGVGKTAIAEGLAQRIA+ D+PD +E K+V+TLD+GLLVAGTKYRGEF
Sbjct: 197 RRTKNNPVLIGEPGVGKTAIAEGLAQRIANNDIPDILEDKRVVTLDIGLLVAGTKYRGEF 256
Query: 120 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 179
EERLKK+M+EI+ + +IL IDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTL
Sbjct: 257 EERLKKIMDEIRSAGNVILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTL 316
Query: 180 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 239
DEYRKHIE+D ALERRFQPV V EP+V+ETI+IL GLRERYE HHKL+ D AL +AA+L
Sbjct: 317 DEYRKHIERDAALERRFQPVMVGEPTVEETIEILFGLRERYEQHHKLKILDSALEAAAKL 376
Query: 240 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 299
S +YISDR+LPDKAIDL+DEAGSRVRL +QLP A+EL+KELRQ+ KEK+EAVR QDF+
Sbjct: 377 SDRYISDRYLPDKAIDLVDEAGSRVRLLSSQLPPAAKELDKELRQVLKEKDEAVRSQDFD 436
Query: 300 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 359
KAGELRDREM++KA+I A+ K K++T DV P VTE DI IV++WTG+PV K+
Sbjct: 437 KAGELRDREMEIKAEIRAISQTKKTEGKSDT---DVSPNVTEEDIAQIVASWTGVPVNKL 493
Query: 360 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 419
+ ES++LL ME+TLH+R+IGQ+EAVKA+SRAIRRARVGLKNPNRPIASFIFSGPTGVGK
Sbjct: 494 TESESEKLLHMEDTLHQRLIGQEEAVKAVSRAIRRARVGLKNPNRPIASFIFSGPTGVGK 553
Query: 420 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 479
+EL KALA+Y+FGSEEAMIRLDMSE+MERHTVSKLIGSPPGYVGY EGGQLTEAVRRRPY
Sbjct: 554 TELTKALASYFFGSEEAMIRLDMSEYMERHTVSKLIGSPPGYVGYNEGGQLTEAVRRRPY 613
Query: 480 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 539
TVVLFDEIEKAHPDVFNM+LQILEDGRLTD+KGRTVDFKNTLLIMTSN+GS+VIEKGG
Sbjct: 614 TVVLFDEIEKAHPDVFNMLLQILEDGRLTDAKGRTVDFKNTLLIMTSNIGSTVIEKGGTG 673
Query: 540 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 599
IGF+ ++ D+ YNRI+SLV EELK+YFRPEFLNRLDE+IVFRQL E+KEIA IML
Sbjct: 674 IGFEFADNQADAQYNRIRSLVNEELKRYFRPEFLNRLDEIIVFRQLIMDEIKEIAVIMLN 733
Query: 600 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIK 658
EVF RL K I L VTE F+ER+V+EGYN SYGARPLRRAIMRLLED +AE++L+ IK
Sbjct: 734 EVFGRLTEKGITLDVTEAFKERLVKEGYNQSYGARPLRRAIMRLLEDVLAEEILSGRIK 792
>gi|11465798|ref|NP_053942.1| Clp protease ATP binding subunit [Porphyra purpurea]
gi|1705925|sp|P51332.1|CLPC_PORPU RecName: Full=ATP-dependent Clp protease ATP-binding subunit clpA
homolog
gi|1276798|gb|AAC08218.1| Clp protease ATP binding subunit (chloroplast) [Porphyra purpurea]
Length = 821
Score = 1004 bits (2595), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 495/678 (73%), Positives = 585/678 (86%), Gaps = 4/678 (0%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
M+GE+ EA +G + +K PTLEE+G+NLT++A EG LDPVVGRQ +IERV+QILGR
Sbjct: 141 MLGENAEANVSGSNATQARSKTPTLEEFGSNLTQMAIEGGLDPVVGRQKEIERVIQILGR 200
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNP LIGEPGVGKTAIAEGLAQRIA+ DVP +E K VITLD+GLLVAGTKYRGEFE
Sbjct: 201 RTKNNPVLIGEPGVGKTAIAEGLAQRIANRDVPSILEDKLVITLDVGLLVAGTKYRGEFE 260
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
ERLK++M+EIK +D +IL IDEVHTLIGAGAAEGAIDAAN+LKP+LARGELQCIGATTL+
Sbjct: 261 ERLKRIMDEIKSADNVILVIDEVHTLIGAGAAEGAIDAANLLKPALARGELQCIGATTLE 320
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRKHIEKDPALERRF PV V EPSV+ETI+IL GLR+RYE HH+L +D AL +AA+ +
Sbjct: 321 EYRKHIEKDPALERRFHPVVVGEPSVEETIEILFGLRDRYEKHHQLTMSDGALAAAAKYA 380
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
QYISDRFLPDKAIDLIDEAGSRVRL ++QLP AREL+KELR + K K+EA+R Q +E
Sbjct: 381 NQYISDRFLPDKAIDLIDEAGSRVRLLNSQLPPAARELDKELRAVLKTKDEAIRAQKYET 440
Query: 301 AGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVS 360
A + R REM++KAQI+A+ K E PVVTE DI IV+AWTGIPV K++
Sbjct: 441 AEQYRAREMEIKAQIAAIAQSKKNEPDLNLE----DPVVTEDDIAEIVAAWTGIPVTKLT 496
Query: 361 TDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 420
ES++L++MEETLH R+IGQDEAV A+SRAIRRARVGLKNPNRPIASFIFSGPTGVGK+
Sbjct: 497 KSESEKLMQMEETLHGRIIGQDEAVIAVSRAIRRARVGLKNPNRPIASFIFSGPTGVGKT 556
Query: 421 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 480
EL KALA+Y+FGSE +MIRLDMSE+MERHTVSKLIGSPPGYVGY+EGG LTEAVR++PYT
Sbjct: 557 ELTKALASYFFGSEASMIRLDMSEYMERHTVSKLIGSPPGYVGYSEGGYLTEAVRKKPYT 616
Query: 481 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI 540
V+LFDEIEKAHPD+FN++LQILEDGRLTD+KGRT+DFKNTLLIMTSN+GS VIEKGG +
Sbjct: 617 VILFDEIEKAHPDIFNLLLQILEDGRLTDAKGRTIDFKNTLLIMTSNIGSKVIEKGGGSL 676
Query: 541 GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 600
GF+L D+ +S Y R++SLV EELKQYFRPEFLNRLDE+IVFRQLTK EV+EIA++ML E
Sbjct: 677 GFELSEDQTESQYTRVRSLVNEELKQYFRPEFLNRLDEIIVFRQLTKDEVREIAELMLNE 736
Query: 601 VFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEG 660
VF R+K +DI+L VTERF+ER+VEEGYNPSYGARPLRRA+MRLLEDS+AE++L+ +IK G
Sbjct: 737 VFARIKQQDIQLNVTERFKERLVEEGYNPSYGARPLRRAVMRLLEDSLAEEVLSGKIKAG 796
Query: 661 DSVIVDVDSDGNVTVLNG 678
DS +VDV ++G V VL G
Sbjct: 797 DSPVVDVTNEGEVKVLLG 814
>gi|51209900|ref|YP_063564.1| Clp protease ATP binding subunit [Gracilaria tenuistipitata var.
liui]
gi|50657654|gb|AAT79639.1| Clp protease ATP binding subunit [Gracilaria tenuistipitata var.
liui]
Length = 823
Score = 1004 bits (2595), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 490/659 (74%), Positives = 580/659 (88%), Gaps = 4/659 (0%)
Query: 20 NKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAI 79
+K PTLEE+G+NLT+LA EG LDPVVGRQ +IERV+QILGRRTKNNP LIGEPGVGKTAI
Sbjct: 160 SKTPTLEEFGSNLTELAIEGILDPVVGRQKEIERVIQILGRRTKNNPVLIGEPGVGKTAI 219
Query: 80 AEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILF 139
AEGLAQRIA+ D+P +E K V+TLD+GLLVAGTKYRGEFEERLK++M+EIK ++ I+L
Sbjct: 220 AEGLAQRIANKDIPSILEDKLVVTLDVGLLVAGTKYRGEFEERLKRIMDEIKSANNIVLV 279
Query: 140 IDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPV 199
IDEVHTLIGAGAAEGAIDAAN+LKP+LARGELQCIGATTL+EYRKHIEKD ALERRFQPV
Sbjct: 280 IDEVHTLIGAGAAEGAIDAANLLKPALARGELQCIGATTLEEYRKHIEKDAALERRFQPV 339
Query: 200 KVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDE 259
V EPSV+ETI+IL GLR+RYE HH+L+ +DEAL +AA+ + QYISDRFLPDKAIDLIDE
Sbjct: 340 LVGEPSVEETIEILFGLRDRYEKHHQLKMSDEALAAAAKYANQYISDRFLPDKAIDLIDE 399
Query: 260 AGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALV 319
AGSRVRL ++QLP AREL+KELR + K K+EA+R Q +EKA + R REM++KAQI+A+
Sbjct: 400 AGSRVRLLNSQLPPAARELDKELRSVLKTKDEAIRAQKYEKAEQYRTREMEIKAQIAAIA 459
Query: 320 DKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVI 379
K + E PVVTE DI IV+ WTGIPV K++ ES++L+ MEETLH R+I
Sbjct: 460 QSKKNEPNVQIE----DPVVTEDDIAEIVAFWTGIPVTKLTKSESEKLMHMEETLHNRII 515
Query: 380 GQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIR 439
GQDEAV A+SRAIRRARVGLKNPNRPIASFIFSGPTGVGK+EL KALA+Y+FGS+EAM+R
Sbjct: 516 GQDEAVVAVSRAIRRARVGLKNPNRPIASFIFSGPTGVGKTELTKALASYFFGSQEAMVR 575
Query: 440 LDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMML 499
LDMSE+MERHTVSKLIGSPPGYVGY+EGG LTEAVR+RPYTV+LFDEIEKAHPD+FN++L
Sbjct: 576 LDMSEYMERHTVSKLIGSPPGYVGYSEGGYLTEAVRKRPYTVILFDEIEKAHPDIFNLLL 635
Query: 500 QILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSL 559
QILEDGRLTD+KGRT+DFKNTLLIMTSN+GS VIEKGG +GF+L + +S YNRI+SL
Sbjct: 636 QILEDGRLTDAKGRTIDFKNTLLIMTSNIGSKVIEKGGGSLGFELGESQTESQYNRIRSL 695
Query: 560 VTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFR 619
V EELKQYFRPEFLNRLDE+IVFRQLTK EV+EIA+IML+EVF+R+K ++IEL+VTERF+
Sbjct: 696 VNEELKQYFRPEFLNRLDEIIVFRQLTKDEVREIAEIMLQEVFNRIKQQEIELEVTERFK 755
Query: 620 ERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNG 678
R+V+EGYNPSYGARPLRRA+MRLLEDS+AE++L+ +IK GDS +VDV +G VTVL G
Sbjct: 756 NRLVDEGYNPSYGARPLRRAVMRLLEDSLAEEVLSGKIKAGDSAVVDVTDEGKVTVLLG 814
>gi|317970390|ref|ZP_07971780.1| ATPase [Synechococcus sp. CB0205]
Length = 850
Score = 1003 bits (2594), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 499/683 (73%), Positives = 588/683 (86%), Gaps = 19/683 (2%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
M+GE+ E G G GGG K PTL+E+G+NLT+ A +GKLDPVVGRQ +IERV+QILGR
Sbjct: 142 MLGETAEVAGGGGGGGKGSTKTPTLDEFGSNLTQQASDGKLDPVVGRQHEIERVIQILGR 201
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNP LIGEPGVGKTAIAEGLAQRI SGDVPD +E K+V+TLD+GLLVAGTKYRGEFE
Sbjct: 202 RTKNNPVLIGEPGVGKTAIAEGLAQRINSGDVPDILEDKRVLTLDIGLLVAGTKYRGEFE 261
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
ERLKK+MEEI+ + +IL IDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTLD
Sbjct: 262 ERLKKIMEEIRGAGNVILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLD 321
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRKHIE+D ALERRFQPV+V EPSV++TI+IL+GL+ERYE HH+L DEALV+AA L
Sbjct: 322 EYRKHIERDAALERRFQPVQVGEPSVEDTIEILRGLKERYESHHRLTIADEALVAAATLG 381
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
+YISDRFLPDKAIDLIDEAGSRVRL +++LP A+E++K+LR+I K+K+EAVR QDF K
Sbjct: 382 DRYISDRFLPDKAIDLIDEAGSRVRLMNSKLPSAAKEVDKQLREIEKQKDEAVREQDFTK 441
Query: 301 AGELRDREMDLKAQI-SALVDKGKEMSKAETEAGDV-----------------GPVVTEV 342
AGELRD+E++L+ QI S L ++ +E AE+ G GP+VTE
Sbjct: 442 AGELRDKEVELREQIRSILQNRNEEKPAAESSEGSADTPVAVAEAPAAAVSESGPMVTEE 501
Query: 343 DIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNP 402
DI IV++WTG+PV+K++ ES +LL MEETLH+R+IGQDEAVKA+SRAIRRARVGLKNP
Sbjct: 502 DIAQIVASWTGVPVQKLTESESAKLLNMEETLHQRLIGQDEAVKAVSRAIRRARVGLKNP 561
Query: 403 NRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYV 462
NRPIASFIFSGPTGVGK+EL K+LAAY+FGSEEAMIRLDMSEFMERHTVSKLIGSPPGYV
Sbjct: 562 NRPIASFIFSGPTGVGKTELTKSLAAYFFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYV 621
Query: 463 GYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLL 522
G+ EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFN++LQ+LEDGRLTDSKGRTVDFKNTL+
Sbjct: 622 GFNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNLLLQLLEDGRLTDSKGRTVDFKNTLI 681
Query: 523 IMTSNVGSSVIEKGGRRIGFDLD-YDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIV 581
IMTSN+GS VIEKGG +GF+ D ++++YNRI+SLV EELKQYFRPEFLNRLDE+IV
Sbjct: 682 IMTSNIGSKVIEKGGGGLGFEFSGGDAEETNYNRIRSLVNEELKQYFRPEFLNRLDEIIV 741
Query: 582 FRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIM 641
FRQL++ EVKEI++IMLKEVF R++ K I L VTE F+ER+V+EGYNPSYGARPLRRA+M
Sbjct: 742 FRQLSRDEVKEISEIMLKEVFTRMQEKGITLTVTEAFKERLVDEGYNPSYGARPLRRAVM 801
Query: 642 RLLEDSMAEKMLAREIKEGDSVI 664
RLLEDS+AE+ L+ I EGD+ +
Sbjct: 802 RLLEDSLAEEFLSGRIGEGDTAL 824
>gi|56751262|ref|YP_171963.1| ATP-dependent Clp protease regulatory subunit ClpC [Synechococcus
elongatus PCC 6301]
gi|56686221|dbj|BAD79443.1| ATP-dependent Clp protease regulatory subunit ClpC [Synechococcus
elongatus PCC 6301]
Length = 839
Score = 1002 bits (2591), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 503/677 (74%), Positives = 589/677 (87%), Gaps = 7/677 (1%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
M+GE+ E GGG K PTL+E+G+NLT+ A +GKLDPVVGRQ +IERV+QILGR
Sbjct: 156 MLGETAEV---STGGGQGRTKTPTLDEFGSNLTQQAADGKLDPVVGRQKEIERVIQILGR 212
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNP LIGEPGVGKTAIAEGLAQRIA+GD+PD +E K+V+TLD+GLLVAGTKYRGEFE
Sbjct: 213 RTKNNPVLIGEPGVGKTAIAEGLAQRIATGDIPDILEDKRVVTLDIGLLVAGTKYRGEFE 272
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
ERLKK+M+EI+ + ++IL IDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTLD
Sbjct: 273 ERLKKIMDEIRSAGDVILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLD 332
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRKHIE+D ALERRFQPV V EPSVD+TI+IL+GLRERYE HHKL+ DEAL +AA+L+
Sbjct: 333 EYRKHIERDAALERRFQPVMVGEPSVDDTIEILRGLRERYEQHHKLKIADEALEAAAKLA 392
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
+YISDRFLPDKAIDLIDEAGSRVRL ++QLP A+EL+KELRQ+ K+K++AVR QDF+K
Sbjct: 393 DRYISDRFLPDKAIDLIDEAGSRVRLMNSQLPPAAKELDKELRQVLKDKDDAVRSQDFDK 452
Query: 301 AGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVS 360
AGELRDREM++K QI ++ K + T D P+VTE DI HIV++WTG+PV K++
Sbjct: 453 AGELRDREMEIKTQIRSIAQSKKADGTSST---DDSPIVTEEDIAHIVASWTGVPVNKLT 509
Query: 361 TDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 420
ES +LL MEETLH R+IGQDEAVKA+SRAIRRARVGLKNPNRPIASFIFSGPTGVGK+
Sbjct: 510 ESESTKLLNMEETLHSRLIGQDEAVKAVSRAIRRARVGLKNPNRPIASFIFSGPTGVGKT 569
Query: 421 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 480
EL KALAAY+FGSEEAMIRLDMSE+MERHTVSKLIGSPPGYVGY EGGQLTEAVRRRPYT
Sbjct: 570 ELTKALAAYFFGSEEAMIRLDMSEYMERHTVSKLIGSPPGYVGYNEGGQLTEAVRRRPYT 629
Query: 481 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI 540
VVL DEIEKAHPDV N++LQ+LEDGRLTD+KGRTVDFKNTL+I+TSN+GS VIEKGG +
Sbjct: 630 VVLLDEIEKAHPDVLNLLLQLLEDGRLTDAKGRTVDFKNTLIILTSNIGSKVIEKGGGGL 689
Query: 541 GFDLD-YDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 599
GF+ DE ++ YNRI+SLV EELKQYFRPEFLNRLDE+IVF QL K EVKEIADIML+
Sbjct: 690 GFEFSGVDEAENQYNRIRSLVNEELKQYFRPEFLNRLDEIIVFCQLNKEEVKEIADIMLR 749
Query: 600 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 659
EVF R+ K I L VTE+F++R+VEEGYNPSYGARPLRRAIMRLLEDS+AE+ L+ +++E
Sbjct: 750 EVFGRMLEKGISLSVTEKFKDRLVEEGYNPSYGARPLRRAIMRLLEDSLAEEFLSGKLRE 809
Query: 660 GDSVIVDVDSDGNVTVL 676
GD+ +VD+ +G V VL
Sbjct: 810 GDTAVVDIGEEGKVQVL 826
>gi|78213152|ref|YP_381931.1| ATPase [Synechococcus sp. CC9605]
gi|78197611|gb|ABB35376.1| ATPase [Synechococcus sp. CC9605]
Length = 846
Score = 1001 bits (2589), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 489/669 (73%), Positives = 575/669 (85%), Gaps = 13/669 (1%)
Query: 20 NKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAI 79
K PTL+E+G NLT+LA E KLDPVVGR +I+RV+QILGRRTKNNP LIGEPGVGKTAI
Sbjct: 161 TKTPTLDEFGNNLTQLATEAKLDPVVGRHNEIDRVIQILGRRTKNNPVLIGEPGVGKTAI 220
Query: 80 AEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILF 139
AEGLAQRI GD+PD +E K+V+TLD+GLLVAGTKYRGEFEERLKK+MEEIK + +IL
Sbjct: 221 AEGLAQRIQQGDIPDILEDKRVLTLDIGLLVAGTKYRGEFEERLKKIMEEIKSAGNVILV 280
Query: 140 IDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPV 199
IDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTLDEYRKHIE+D ALERRFQPV
Sbjct: 281 IDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIERDAALERRFQPV 340
Query: 200 KVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDE 259
V EPS+D+TI+IL+GLRERYE HH+L+ TD+ALV+AA L +YISDRFLPDKAIDLIDE
Sbjct: 341 NVGEPSIDDTIEILRGLRERYEQHHRLKITDDALVAAATLGDRYISDRFLPDKAIDLIDE 400
Query: 260 AGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALV 319
AGSRVRL +++LP A+E++KELR + K+K +AVR QDF KAGELR++E++L+ QI +L+
Sbjct: 401 AGSRVRLLNSKLPPAAKEVDKELRSVQKDKEDAVRDQDFTKAGELREKEVELREQIRSLL 460
Query: 320 DKGKEMSKAET------------EAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRL 367
K+ +KA+T A D P+V E DI IV++WTG+PV+K++ ES +L
Sbjct: 461 QANKDEAKADTTAESGETAFTEAAASDSSPMVNEEDIAQIVASWTGVPVQKLTESESVKL 520
Query: 368 LKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALA 427
L MEETLHKR+IGQDEAVKA+S+AIRRARVGLKNPNRPIASFIFSGPTGVGK+EL KALA
Sbjct: 521 LNMEETLHKRLIGQDEAVKAVSKAIRRARVGLKNPNRPIASFIFSGPTGVGKTELTKALA 580
Query: 428 AYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEI 487
Y+FGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVG+ EGGQLTEAVRRRPYTVVLFDEI
Sbjct: 581 TYFFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGFNEGGQLTEAVRRRPYTVVLFDEI 640
Query: 488 EKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYD 547
EKAHPDVFN++LQ+LEDGRLTDSKGRTVDFKNTL+IMTSN+GS VIEKGG +GF+ +
Sbjct: 641 EKAHPDVFNLLLQLLEDGRLTDSKGRTVDFKNTLIIMTSNIGSKVIEKGGGGLGFEFSGE 700
Query: 548 E-KDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLK 606
++S Y RI+SLV EELKQYFRPEFLNRLDE+IVFRQL + EVKEIA+IMLKEVF R+
Sbjct: 701 SAEESQYTRIRSLVNEELKQYFRPEFLNRLDEIIVFRQLNRDEVKEIAEIMLKEVFGRMG 760
Query: 607 TKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVD 666
K I L V++ F+ER+VEEGYNP+YGARPLRRA+MRLLEDS+AE++L+ IK+G+ VD
Sbjct: 761 DKGITLTVSDAFKERLVEEGYNPAYGARPLRRAVMRLLEDSLAEEVLSGRIKDGEHAEVD 820
Query: 667 VDSDGNVTV 675
VD + V V
Sbjct: 821 VDENKKVVV 829
>gi|11465497|ref|NP_045112.1| Clp protease ATP binding subunit [Cyanidium caldarium]
gi|14194537|sp|Q9TM05.1|CLPC_CYACA RecName: Full=ATP-dependent Clp protease ATP-binding subunit clpA
homolog
gi|6466400|gb|AAF12982.1|AF022186_105 unknown [Cyanidium caldarium]
Length = 854
Score = 1001 bits (2588), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 485/681 (71%), Positives = 590/681 (86%), Gaps = 5/681 (0%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
M+GE++E VG S +K+PTLEE+GTNLT++A EGKLDPVVGR +IERVVQILGR
Sbjct: 172 MIGETSEV---SVGATSGRSKVPTLEEFGTNLTQMAVEGKLDPVVGRAKEIERVVQILGR 228
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNP LIGEPGVGKTAIAEGLAQRI + +VPDT+E KKVITLD+ LLVAGTKYRGEFE
Sbjct: 229 RTKNNPVLIGEPGVGKTAIAEGLAQRIINNEVPDTLEDKKVITLDVSLLVAGTKYRGEFE 288
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
ERLKK+M+EI+ +D +IL IDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTL+
Sbjct: 289 ERLKKIMDEIRMADNVILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLE 348
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRKHIEKD ALERRFQPV V EP+V+ETI+IL+GLR+RYE HH+L+ +D A+V+AA+LS
Sbjct: 349 EYRKHIEKDAALERRFQPVMVEEPTVEETIEILRGLRDRYEAHHRLKISDSAIVAAAKLS 408
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
QYI+DRFLPDKAIDL+DEA SRVRL + +LP A L++ELR I K KNE +R DFE+
Sbjct: 409 DQYIADRFLPDKAIDLVDEASSRVRLMNYKLPPSAEYLDEELRHIQKIKNELIRSGDFEE 468
Query: 301 AGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVS 360
A + R+RE+++K Q++AL+ KE E E P+V E DI +IVS+WTGIPV K++
Sbjct: 469 ASQFREREIEVKVQMAALMKAKKE--AIEEELALNPPIVNEDDIANIVSSWTGIPVSKLT 526
Query: 361 TDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 420
ES++LL MEETLH R++GQ+EAV A+S+AIRRARVGLKNPNRPIASFIFSGPTGVGK+
Sbjct: 527 KSESEKLLHMEETLHSRIVGQNEAVIAVSKAIRRARVGLKNPNRPIASFIFSGPTGVGKT 586
Query: 421 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 480
EL KA+A+Y+FGSEEAM+RLDMSE+MERHTVSKLIGSPPGYVGY EGGQLTEAVR+RPYT
Sbjct: 587 ELTKAMASYFFGSEEAMVRLDMSEYMERHTVSKLIGSPPGYVGYNEGGQLTEAVRKRPYT 646
Query: 481 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI 540
VVLFDEIEKAHPDVFN++LQILEDGRLTDSKGRT+DFKNTLLIMTSN+GS VIEK G +
Sbjct: 647 VVLFDEIEKAHPDVFNLLLQILEDGRLTDSKGRTIDFKNTLLIMTSNIGSKVIEKKGGGL 706
Query: 541 GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 600
GF+L+ + ++ Y+R+++LV EELKQYFRPEFLNR+DE+IVFRQLTK EV++IA IML+E
Sbjct: 707 GFELEENIEELQYSRMRNLVNEELKQYFRPEFLNRVDEIIVFRQLTKDEVRDIAHIMLRE 766
Query: 601 VFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEG 660
+F+R+K + I LQVTERF+ ++EEGYNPSYGARPLRRA++RLLEDS+AE++L+ +IKEG
Sbjct: 767 IFERVKQQGISLQVTERFKNLLIEEGYNPSYGARPLRRALVRLLEDSLAEEVLSGKIKEG 826
Query: 661 DSVIVDVDSDGNVTVLNGSSG 681
D+ ++DVD + V +L G+S
Sbjct: 827 DNAMIDVDENKQVKILLGNSN 847
>gi|86605369|ref|YP_474132.1| Clp protease, ATP-binding subunit ClpC [Synechococcus sp. JA-3-3Ab]
gi|86553911|gb|ABC98869.1| Clp protease, ATP-binding subunit ClpC [Synechococcus sp. JA-3-3Ab]
Length = 824
Score = 1001 bits (2588), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 502/676 (74%), Positives = 587/676 (86%), Gaps = 6/676 (0%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
M+GE+ E V AG GG SS K PTL+E+G+NLT+LA+EGKLDPVVGR +IERV+QILGR
Sbjct: 141 MLGETAE-VTAG-GGSSSRTKTPTLDEFGSNLTQLAQEGKLDPVVGRTREIERVIQILGR 198
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNP LIGEPGVGKTAIAEGLAQRI GDVPD + K+V++LD+GLLVAGTKYRGEFE
Sbjct: 199 RTKNNPVLIGEPGVGKTAIAEGLAQRIVQGDVPDILADKRVVSLDIGLLVAGTKYRGEFE 258
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
ERLKK+M+EI+ + IIL IDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTLD
Sbjct: 259 ERLKKIMDEIRNAGNIILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLD 318
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRKHIE+D ALERRFQP+ V EPSV ETI+IL GLRERYE HHKL+ +D AL +AA+L+
Sbjct: 319 EYRKHIERDAALERRFQPIMVGEPSVSETIEILFGLRERYEQHHKLKISDAALEAAAKLA 378
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
QYISDRFLPDKAIDLIDEA SRVRL ++QLP AREL++ELR++ KEK+ AVR QDF++
Sbjct: 379 DQYISDRFLPDKAIDLIDEAASRVRLINSQLPPAARELDQELRRVLKEKDAAVRAQDFDR 438
Query: 301 AGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVS 360
AGELRDREM++K QI A+ K + E P VTE DI +VSAWTG+PV K++
Sbjct: 439 AGELRDREMEIKQQIRAIAAAKKAEESSRQEM----PEVTEEDIAQVVSAWTGVPVAKLT 494
Query: 361 TDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 420
ES++LL MEETLH+R+IGQDEAV+AISRAIRRARVGLKNPNRPIASFIFSGPTGVGK+
Sbjct: 495 ESESEKLLHMEETLHQRIIGQDEAVRAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKT 554
Query: 421 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 480
EL KALAAY+FGSE AMIRLDMSE+MERHTVSKLIGSPPGYVGY EGGQLTEAVRRRPYT
Sbjct: 555 ELTKALAAYFFGSESAMIRLDMSEYMERHTVSKLIGSPPGYVGYNEGGQLTEAVRRRPYT 614
Query: 481 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI 540
VVLFDEIEKAHPDVFN++LQILEDGRLTD+KGRTVDFKNTL++MTSN+GS VIEKGG +
Sbjct: 615 VVLFDEIEKAHPDVFNLLLQILEDGRLTDAKGRTVDFKNTLIVMTSNIGSKVIEKGGGSL 674
Query: 541 GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 600
GF+ + +++D++YNRI++LV EELKQYFRPEFLNR+DE+IVFRQLTK EVK+IADI+LKE
Sbjct: 675 GFEFNTNDEDANYNRIRNLVHEELKQYFRPEFLNRVDEIIVFRQLTKEEVKQIADILLKE 734
Query: 601 VFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEG 660
VFDR+K K I L V++RF++ +VEEGYNPSYGARPLRRAI RLLED +AE++L +KEG
Sbjct: 735 VFDRMKEKKIYLTVSDRFKDLLVEEGYNPSYGARPLRRAIQRLLEDILAEEILTGHVKEG 794
Query: 661 DSVIVDVDSDGNVTVL 676
V++DVD + VL
Sbjct: 795 SEVLIDVDEERKPKVL 810
>gi|428775828|ref|YP_007167615.1| ATPase [Halothece sp. PCC 7418]
gi|428690107|gb|AFZ43401.1| ATPase AAA-2 domain protein [Halothece sp. PCC 7418]
Length = 823
Score = 1000 bits (2586), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 501/677 (74%), Positives = 594/677 (87%), Gaps = 9/677 (1%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
M+GE+ E V +G G + K PTL+E+G+NLT+LA + KLDPVVGRQ +IERV+QILGR
Sbjct: 141 MLGETAE-VSSGSSQGRT--KTPTLDEFGSNLTQLATDSKLDPVVGRQNEIERVIQILGR 197
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNP LIGEPGVGKTAIAEGLAQRI++ DVPD +E K+V+TLD+GLLVAGTKYRGEFE
Sbjct: 198 RTKNNPVLIGEPGVGKTAIAEGLAQRISNEDVPDILENKRVVTLDIGLLVAGTKYRGEFE 257
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
ERLKK+M+EI+Q+ +IL IDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTLD
Sbjct: 258 ERLKKIMDEIRQAGNVILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLD 317
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRKHIE+D ALERRFQPV V EP+V++T++IL GLR+RYE HHKLR TD AL +AA+LS
Sbjct: 318 EYRKHIERDAALERRFQPVMVGEPTVEDTVEILFGLRDRYEQHHKLRITDAALDAAAKLS 377
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
+YISDR+LPDKAIDLIDEAGSRVRL ++QLP A+EL++ELRQ+ K+K++AVR QDF++
Sbjct: 378 DRYISDRYLPDKAIDLIDEAGSRVRLINSQLPPAAKELDEELRQVLKQKDDAVRSQDFDR 437
Query: 301 AGELRDREMDLKAQISALVD-KGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 359
AGELRDREM++K++I +L K E S+ + VGPVV +I HIV++WTG+PV K+
Sbjct: 438 AGELRDREMEIKSEIRSLASAKNTETSQDD----QVGPVVDVEEIAHIVASWTGVPVSKI 493
Query: 360 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 419
+ ES++LL ME TLH+R+IGQ+EAV+A+SRAIRRARVGLKNPNRPIASFIFSGPTGVGK
Sbjct: 494 TETESEKLLHMEGTLHERLIGQEEAVRAVSRAIRRARVGLKNPNRPIASFIFSGPTGVGK 553
Query: 420 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 479
+EL KALA Y+FGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGY EGGQLTEAVRRRPY
Sbjct: 554 TELTKALATYFFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYNEGGQLTEAVRRRPY 613
Query: 480 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 539
TVVLFDEIEKAHPDVFNM+LQILEDGRLTD+KGRTVDFKNTLLIMTSN+GS VIEKGG
Sbjct: 614 TVVLFDEIEKAHPDVFNMLLQILEDGRLTDAKGRTVDFKNTLLIMTSNIGSKVIEKGGGG 673
Query: 540 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 599
+GF+LD D+ +S YNRI+SLV EELKQYFRPEFLNRLDE+IVFRQL + EVKEIA+IML
Sbjct: 674 LGFELDEDQAESQYNRIRSLVNEELKQYFRPEFLNRLDEIIVFRQLNREEVKEIAEIMLH 733
Query: 600 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 659
EVF RL ++I+L+VTE F+ER+VEEGY+PSYGARPLRRAIMRLLED +AE++L+ + E
Sbjct: 734 EVFSRLTEQEIKLEVTEAFKERLVEEGYSPSYGARPLRRAIMRLLEDILAEEILSGRLSE 793
Query: 660 GDSVIVDVDSDGNVTVL 676
GD+ VDV +G+V V
Sbjct: 794 GDTATVDV-VEGDVKVF 809
>gi|86608097|ref|YP_476859.1| Clp protease, ATP-binding subunit ClpC [Synechococcus sp.
JA-2-3B'a(2-13)]
gi|86556639|gb|ABD01596.1| Clp protease, ATP-binding subunit ClpC [Synechococcus sp.
JA-2-3B'a(2-13)]
Length = 824
Score = 998 bits (2580), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 500/676 (73%), Positives = 586/676 (86%), Gaps = 6/676 (0%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
M+GE+ E V AG GG SS K PTL+E+G+NLT+LA+EGKLDPVVGR +IERV+QILGR
Sbjct: 141 MLGETAE-VTAG-GGSSSRTKTPTLDEFGSNLTQLAQEGKLDPVVGRTREIERVIQILGR 198
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNP LIGEPGVGKTAIAEGLAQRI GDVPD + K+VI+LD+GLLVAGTKYRGEFE
Sbjct: 199 RTKNNPVLIGEPGVGKTAIAEGLAQRIVQGDVPDILADKRVISLDIGLLVAGTKYRGEFE 258
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
ERLKK+M+EI+ + IIL IDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTLD
Sbjct: 259 ERLKKIMDEIRNAGNIILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLD 318
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRKHIE+D ALERRFQP+ V EP+V ETI+IL GLRERYE HHKL+ +D AL +AA+L+
Sbjct: 319 EYRKHIERDAALERRFQPIMVGEPTVSETIEILFGLRERYEQHHKLKISDAALDAAAKLA 378
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
QYISDRFLPDKAIDLIDEA SRVRL ++QLP AREL++ELR++ KEK+ AVR Q+F+K
Sbjct: 379 DQYISDRFLPDKAIDLIDEAASRVRLINSQLPPAARELDQELRRVLKEKDAAVRAQNFDK 438
Query: 301 AGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVS 360
AGELRDREM++K QI A+ K + +E P VTE D+ +VSAWTG+PV K++
Sbjct: 439 AGELRDREMEIKQQIRAIAAAKKAEESSRSEM----PEVTEEDVAQVVSAWTGVPVAKLT 494
Query: 361 TDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 420
ES +LL MEETLH+R+IGQDEAV+AISRAIRRARVGLKNPNRPIASFIFSGPTGVGK+
Sbjct: 495 ESESVKLLNMEETLHQRIIGQDEAVRAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKT 554
Query: 421 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 480
EL KALAAY+FGSE AMIRLDMSE+MERHTVSKLIGSPPGYVGY EGGQLTEAVRRRPYT
Sbjct: 555 ELTKALAAYFFGSESAMIRLDMSEYMERHTVSKLIGSPPGYVGYNEGGQLTEAVRRRPYT 614
Query: 481 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI 540
VVLFDEIEKAHPDVFN++LQILEDGRLTD+KGRTVDFKNTL++MTSN+GS VIEKGG +
Sbjct: 615 VVLFDEIEKAHPDVFNLLLQILEDGRLTDAKGRTVDFKNTLIVMTSNIGSKVIEKGGGSL 674
Query: 541 GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 600
GF+ + +++D++YNRI++LV EELKQYFRPEFLNR+DE+IVFRQLTK EVK+IADI+LKE
Sbjct: 675 GFEFNTNDEDANYNRIRNLVNEELKQYFRPEFLNRVDEIIVFRQLTKDEVKQIADILLKE 734
Query: 601 VFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEG 660
VFDR+ K I L V++RF++ VVEEGYNPSYGARPLRRAI RLLED +AE++L ++EG
Sbjct: 735 VFDRMTEKKIRLTVSDRFKDLVVEEGYNPSYGARPLRRAIQRLLEDILAEEILTGHVREG 794
Query: 661 DSVIVDVDSDGNVTVL 676
V++DVD + VL
Sbjct: 795 SEVLIDVDEERKPKVL 810
>gi|124026198|ref|YP_001015314.1| ClpC [Prochlorococcus marinus str. NATL1A]
gi|123961266|gb|ABM76049.1| ClpC [Prochlorococcus marinus str. NATL1A]
Length = 855
Score = 997 bits (2578), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 499/712 (70%), Positives = 590/712 (82%), Gaps = 26/712 (3%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
M+GE+ E V G G K TL+E+GTNLT+LA E KLDPVVGR +I+RV+QILGR
Sbjct: 141 MLGETAE-VTTGSGSSKGSAKTATLDEFGTNLTQLASESKLDPVVGRHSEIDRVIQILGR 199
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNP LIGEPGVGKTAIAEGLAQRI G++PD +E K+V+TLD+GLLVAGTKYRGEFE
Sbjct: 200 RTKNNPVLIGEPGVGKTAIAEGLAQRIQQGNIPDILEEKRVLTLDIGLLVAGTKYRGEFE 259
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
ERLKK+MEEIK + +IL IDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTLD
Sbjct: 260 ERLKKIMEEIKSAGNVILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLD 319
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRKHIE+D ALERRFQPV + EPS+ +TI+ILKGLRERYE HH+L+ TDEAL +AA L
Sbjct: 320 EYRKHIERDAALERRFQPVMIGEPSIKDTIEILKGLRERYEQHHRLKITDEALDAAANLG 379
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
+YISDRFLPDKAIDLIDEAGSRVRL +++LP EA+E++KELR+I K K EAVR Q+F +
Sbjct: 380 DRYISDRFLPDKAIDLIDEAGSRVRLLNSKLPPEAKEVDKELRKIQKSKEEAVRDQNFTQ 439
Query: 301 AGELRDREMDLKAQISALVD--KGKEMSKAETEAGDV---------------------GP 337
AGELR++E++L+ +I L+ + K S ++ +V P
Sbjct: 440 AGELREKEVELRDKIRNLLQNIRQKPSSNENPDSNNVPQENNQASDQVINQSDDLKVSQP 499
Query: 338 VVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARV 397
VV E DI HIV++WTG+PV+K++ ES +LL ME+TLH+R+IGQDEAVKA+S+AIRRARV
Sbjct: 500 VVNEEDIAHIVASWTGVPVQKLTESESVKLLNMEDTLHQRLIGQDEAVKAVSKAIRRARV 559
Query: 398 GLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGS 457
GLKNPNRPIASFIFSGPTGVGK+EL KALAAY+FGSEEAMIRLDMSEFMERHTVSKLIGS
Sbjct: 560 GLKNPNRPIASFIFSGPTGVGKTELTKALAAYFFGSEEAMIRLDMSEFMERHTVSKLIGS 619
Query: 458 PPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDF 517
PPGYVG+ EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFN++LQ+LE+GRLTDSKGRTVDF
Sbjct: 620 PPGYVGFNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNLLLQLLEEGRLTDSKGRTVDF 679
Query: 518 KNTLLIMTSNVGSSVIEKGGRRIGFDLDYDE-KDSSYNRIKSLVTEELKQYFRPEFLNRL 576
KNTL+IMTSN+GS VIEKGG +GF+ + +D+ YNRIKSLV EELKQYFRPEFLNRL
Sbjct: 680 KNTLIIMTSNIGSKVIEKGGGGLGFEFSGENLEDTQYNRIKSLVNEELKQYFRPEFLNRL 739
Query: 577 DEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPL 636
DE+IVFRQL++ EVK+IA+IMLKEVF R+K K I L V+E F+ER+VEEGYNPSYGARPL
Sbjct: 740 DEIIVFRQLSRDEVKDIAEIMLKEVFSRIKDKGISLTVSEDFKERLVEEGYNPSYGARPL 799
Query: 637 RRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTVLN-GSSGAPESLA 687
RRA+MRLLEDS+AE++L+ IK+GD VD+D V V + G G+ LA
Sbjct: 800 RRAVMRLLEDSLAEEVLSGRIKDGDKAEVDIDESKKVIVKHLGKDGSKPELA 851
>gi|78184962|ref|YP_377397.1| ATPase [Synechococcus sp. CC9902]
gi|78169256|gb|ABB26353.1| ATPase [Synechococcus sp. CC9902]
Length = 843
Score = 997 bits (2577), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 489/666 (73%), Positives = 574/666 (86%), Gaps = 10/666 (1%)
Query: 20 NKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAI 79
K PTL+E+GTNLT++A E KLDPVVGR +I+RV+QILGRRTKNNP LIGEPGVGKTAI
Sbjct: 161 TKTPTLDEFGTNLTQMATESKLDPVVGRYNEIDRVIQILGRRTKNNPVLIGEPGVGKTAI 220
Query: 80 AEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILF 139
AEGLAQRI GD+PD +E K+V+TLD+GLLVAGTKYRGEFEERLKK+MEEIK + +IL
Sbjct: 221 AEGLAQRIQQGDIPDILEDKRVLTLDIGLLVAGTKYRGEFEERLKKIMEEIKSAGNVILV 280
Query: 140 IDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPV 199
IDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTLDEYRKHIE+D ALERRFQPV
Sbjct: 281 IDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIERDAALERRFQPV 340
Query: 200 KVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDE 259
V EPS+D+TI+IL+GLRERYE HH+L+ TDEALV+AA L +YISDRFLPDKAIDLIDE
Sbjct: 341 NVGEPSIDDTIEILRGLRERYEQHHRLKITDEALVAAATLGDRYISDRFLPDKAIDLIDE 400
Query: 260 AGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALV 319
AGSRVRL +++LP EA+E++KELR + K+K +AVR QDF KAGELR++E++L+ +I AL+
Sbjct: 401 AGSRVRLMNSKLPPEAKEVDKELRTVQKDKEDAVRDQDFAKAGELREKEVELREKIRALM 460
Query: 320 DKGKEMSKAETEAG---------DVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKM 370
+ S+ + D P+V+E DI HIV++WTG+PV+K++ ES +LL M
Sbjct: 461 QTSRSSSEEGSSDESAVSTPAVVDTTPMVSEEDIAHIVASWTGVPVQKLTESESVKLLNM 520
Query: 371 EETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYY 430
EETLH+R+IGQDEAVKA+S+AIRRARVGLKNPNRPIASFIFSGPTGVGK+EL KALA Y+
Sbjct: 521 EETLHQRLIGQDEAVKAVSKAIRRARVGLKNPNRPIASFIFSGPTGVGKTELTKALATYF 580
Query: 431 FGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKA 490
FGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVG+ EGGQLTEAVRRRPYTVVLFDEIEKA
Sbjct: 581 FGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGFNEGGQLTEAVRRRPYTVVLFDEIEKA 640
Query: 491 HPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDE-K 549
HPDVFN++LQ+LEDGRLTDSKGRTVDFKNTL+IMTSN+GS VIEKGG +GF+ + +
Sbjct: 641 HPDVFNLLLQLLEDGRLTDSKGRTVDFKNTLVIMTSNIGSKVIEKGGGGLGFEFSGESAE 700
Query: 550 DSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKD 609
DS Y RI+SLV EELKQYFRPEFLNRLDE+IVFRQL + EVKEIA+IMLKEVF R+ K
Sbjct: 701 DSQYTRIRSLVNEELKQYFRPEFLNRLDEIIVFRQLNREEVKEIAEIMLKEVFGRMGEKG 760
Query: 610 IELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDS 669
I L V++ F+ER+VEEGYNP+YGARPLRRA+MRLLEDS+AE++L IK+GD VDVD
Sbjct: 761 ITLTVSDAFKERLVEEGYNPAYGARPLRRAVMRLLEDSLAEEVLTGRIKDGDHAEVDVDE 820
Query: 670 DGNVTV 675
+ V V
Sbjct: 821 NKKVVV 826
>gi|260435541|ref|ZP_05789511.1| chaperone protein ClpB 1 [Synechococcus sp. WH 8109]
gi|260413415|gb|EEX06711.1| chaperone protein ClpB 1 [Synechococcus sp. WH 8109]
Length = 846
Score = 997 bits (2577), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 488/669 (72%), Positives = 573/669 (85%), Gaps = 13/669 (1%)
Query: 20 NKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAI 79
K PTL+E+G NLT+LA E KLDPVVGR +I+RV+QILGRRTKNNP LIGEPGVGKTAI
Sbjct: 161 TKTPTLDEFGNNLTQLATEAKLDPVVGRHNEIDRVIQILGRRTKNNPVLIGEPGVGKTAI 220
Query: 80 AEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILF 139
AEGLAQRI GD+PD +E K+V+TLD+GLLVAGTKYRGEFEERLKK+MEEIK + +IL
Sbjct: 221 AEGLAQRIQQGDIPDILEDKRVLTLDIGLLVAGTKYRGEFEERLKKIMEEIKAAGNVILV 280
Query: 140 IDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPV 199
IDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTLDEYRKHIE+D ALERRFQPV
Sbjct: 281 IDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIERDAALERRFQPV 340
Query: 200 KVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDE 259
V EPS+D+TI+IL+GLRERYE HH+L+ TD+ALV+AA L +YISDRFLPDKAIDLIDE
Sbjct: 341 NVGEPSIDDTIEILRGLRERYEQHHRLKITDDALVAAATLGDRYISDRFLPDKAIDLIDE 400
Query: 260 AGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALV 319
AGSRVRL +++LP A+E++KELR + K+K +AVR QDF KAGELR++E++L+ QI +L+
Sbjct: 401 AGSRVRLLNSKLPPAAKEVDKELRSVQKQKEDAVRDQDFTKAGELREKEVELREQIRSLL 460
Query: 320 DKGKEMSKAETEAGD------------VGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRL 367
K+ KA+ +G P+V E DI IV++WTG+PV+K++ ES +L
Sbjct: 461 QANKDEVKADATSGSGETVSAESSASDSSPMVNEEDIAQIVASWTGVPVQKLTESESVKL 520
Query: 368 LKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALA 427
L MEETLHKR+IGQDEAVKA+S+AIRRARVGLKNPNRPIASFIFSGPTGVGK+EL KALA
Sbjct: 521 LNMEETLHKRLIGQDEAVKAVSKAIRRARVGLKNPNRPIASFIFSGPTGVGKTELTKALA 580
Query: 428 AYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEI 487
Y+FGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVG+ EGGQLTEAVRRRPYTVVLFDEI
Sbjct: 581 TYFFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGFNEGGQLTEAVRRRPYTVVLFDEI 640
Query: 488 EKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYD 547
EKAHPDVFN++LQ+LEDGRLTDSKGRTVDFKNTL+IMTSN+GS VIEKGG +GF+ +
Sbjct: 641 EKAHPDVFNLLLQLLEDGRLTDSKGRTVDFKNTLIIMTSNIGSKVIEKGGGGLGFEFSGE 700
Query: 548 E-KDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLK 606
++S Y RI+SLV EELKQYFRPEFLNRLDE+IVFRQL + EVKEIA+IMLKEVF R+
Sbjct: 701 SAEESQYTRIRSLVNEELKQYFRPEFLNRLDEIIVFRQLNRDEVKEIAEIMLKEVFGRMG 760
Query: 607 TKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVD 666
K I L V++ F+ER+VEEGYNP+YGARPLRRA+MRLLEDS+AE++L+ IK+GD VD
Sbjct: 761 EKGITLTVSDAFKERLVEEGYNPAYGARPLRRAVMRLLEDSLAEEVLSGRIKDGDHAEVD 820
Query: 667 VDSDGNVTV 675
VD + V V
Sbjct: 821 VDENKKVVV 829
>gi|148239871|ref|YP_001225258.1| ATP-dependent Clp protease ATP-binding subunit clpA-like protein
[Synechococcus sp. WH 7803]
gi|147848410|emb|CAK23961.1| ATP-dependent Clp protease ATP-binding subunit clpA homolog
[Synechococcus sp. WH 7803]
Length = 844
Score = 996 bits (2576), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 497/687 (72%), Positives = 584/687 (85%), Gaps = 25/687 (3%)
Query: 23 PTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEG 82
PTL+E+G NLT+LA E KLDPVVGRQ +I+RV+QILGRRTKNNP LIGEPGVGKTAIAEG
Sbjct: 151 PTLDEFGNNLTQLAGEAKLDPVVGRQSEIDRVIQILGRRTKNNPVLIGEPGVGKTAIAEG 210
Query: 83 LAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDE 142
LAQRI GD+PD +E K+V+TLD+GLLVAGTKYRGEFEERLKK+MEEIK + +IL IDE
Sbjct: 211 LAQRIQQGDIPDILEDKRVLTLDIGLLVAGTKYRGEFEERLKKIMEEIKAAGNVILVIDE 270
Query: 143 VHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVP 202
VHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTLDEYRKHIE+D ALERRFQPV V
Sbjct: 271 VHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIERDAALERRFQPVTVG 330
Query: 203 EPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGS 262
EPS+D+TI+ILKGLRERYE HH+LR TDEAL +AA L +YISDRFLPDKAIDLIDEAGS
Sbjct: 331 EPSIDDTIEILKGLRERYEQHHRLRITDEALEAAATLGDRYISDRFLPDKAIDLIDEAGS 390
Query: 263 RVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKG 322
RVRL +++LP EA+E++KELR + KEK +AVR QDF +AGELRD+E++L+ +I +L+
Sbjct: 391 RVRLMNSKLPPEAKEVDKELRAVQKEKEDAVREQDFSRAGELRDKEVELRDKIRSLLQSS 450
Query: 323 KEMS-----KAETEAGDVG------------------PVVTEVDIQHIVSAWTGIPVEKV 359
+E S ++E +A DV PVV E DI IV++WTG+PV+K+
Sbjct: 451 REDSPSDNQQSEDQATDVDVASTESEGATELAVTGTTPVVNEEDIAQIVASWTGVPVQKL 510
Query: 360 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 419
+ ES +LL MEETLHKR+IGQDEAVKA+S+AIRRARVGLKNPNRPIASFIFSGPTGVGK
Sbjct: 511 TESESVKLLNMEETLHKRLIGQDEAVKAVSKAIRRARVGLKNPNRPIASFIFSGPTGVGK 570
Query: 420 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 479
+EL KALAAY+FGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVG+ EGGQLTEAVRRRPY
Sbjct: 571 TELTKALAAYFFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGFNEGGQLTEAVRRRPY 630
Query: 480 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 539
TVVLFDEIEKAHPDVFN++LQ+LEDGRLTDSKGRTVDFKNTL+IMTSN+GS VIEKGG
Sbjct: 631 TVVLFDEIEKAHPDVFNLLLQLLEDGRLTDSKGRTVDFKNTLIIMTSNIGSKVIEKGGGG 690
Query: 540 IGFDLD-YDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIML 598
+GF+ + +++ YNRI+SLV EELKQYFRPEFLNRLDE+IVFRQL + EVKEIA+IML
Sbjct: 691 LGFEFSGENAEENQYNRIRSLVNEELKQYFRPEFLNRLDEIIVFRQLNRDEVKEIAEIML 750
Query: 599 KEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIK 658
+EVF R+ K I L V++ F+ER+VEEGYNP+YGARPLRRA+MRLLEDS+AE++L+ IK
Sbjct: 751 REVFGRIGEKGITLTVSDAFKERLVEEGYNPAYGARPLRRAVMRLLEDSLAEEVLSGRIK 810
Query: 659 EGDSVIVDVDSDGNVTVLNGSSGAPES 685
+GD VDV+ DG V V + + A E+
Sbjct: 811 DGDEAEVDVE-DGKVVVKHLNRTATET 836
>gi|159903639|ref|YP_001550983.1| ClpC [Prochlorococcus marinus str. MIT 9211]
gi|159888815|gb|ABX09029.1| ClpC [Prochlorococcus marinus str. MIT 9211]
Length = 859
Score = 996 bits (2576), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 490/688 (71%), Positives = 582/688 (84%), Gaps = 26/688 (3%)
Query: 21 KMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIA 80
K TL+E+GTNLTKLA E KLDPVVGR +I+RV+QILGRRTKNNP LIGEPGVGKTAIA
Sbjct: 162 KTATLDEFGTNLTKLASESKLDPVVGRYEEIDRVIQILGRRTKNNPVLIGEPGVGKTAIA 221
Query: 81 EGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFI 140
EGLAQRI GD+PD +E K+V+TLD+GLLVAGTKYRGEFEERLKK+MEEIK + +IL I
Sbjct: 222 EGLAQRIQQGDIPDILEEKRVLTLDIGLLVAGTKYRGEFEERLKKIMEEIKSAGNVILVI 281
Query: 141 DEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVK 200
DEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTLDEYRKHIE+D ALERRFQPV
Sbjct: 282 DEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIERDAALERRFQPVM 341
Query: 201 VPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEA 260
+ EPS+++TI+ILKGLRERYE HH+L+ TD+AL +AA L +YISDRFLPDKAIDLIDEA
Sbjct: 342 IGEPSIEDTIEILKGLRERYEQHHRLKITDQALEAAANLGDRYISDRFLPDKAIDLIDEA 401
Query: 261 GSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVD 320
GSRVRL +++LP EA+E++K+LR++ KEK EAVR Q+F +AGELR++E++LK QI+++++
Sbjct: 402 GSRVRLLNSKLPPEAKEVDKQLRKVQKEKEEAVRDQNFTEAGELREKEVNLKNQIASILN 461
Query: 321 K-------------------------GKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIP 355
KE E + + P+V E DI HIV++WTG+P
Sbjct: 462 TTKDKTTLNEGEKDSQPDASAEDKKDNKENISQEIKGVNRSPIVNEEDIAHIVASWTGVP 521
Query: 356 VEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPT 415
V+K++ ES +LL ME+TLH+R+IGQDEAVKA+S+AIRRARVGLKNPNRPIASFIFSGPT
Sbjct: 522 VQKLTESESVKLLNMEDTLHQRLIGQDEAVKAVSKAIRRARVGLKNPNRPIASFIFSGPT 581
Query: 416 GVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVR 475
GVGK+EL KALAAY+FGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVG+ EGGQLTEAVR
Sbjct: 582 GVGKTELTKALAAYFFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGFNEGGQLTEAVR 641
Query: 476 RRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEK 535
RRPYTVVLFDEIEK+HPDVFN++LQ+LE+GRLTDSKGRTVDFKNTL+IMTSN+GS VIEK
Sbjct: 642 RRPYTVVLFDEIEKSHPDVFNLLLQLLEEGRLTDSKGRTVDFKNTLIIMTSNIGSKVIEK 701
Query: 536 GGRRIGFDLDYDE-KDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIA 594
GG +GF+ + +DS YNRIKSLV EELKQYFRPEFLNRLDE+IVFRQL++ EVK+IA
Sbjct: 702 GGGGLGFEFSGESIEDSQYNRIKSLVNEELKQYFRPEFLNRLDEIIVFRQLSRDEVKDIA 761
Query: 595 DIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLA 654
+IML EVF R+K K I L VTE F+ER+VEEGYNPSYGARPLRRA+MRLLEDS+AE++L+
Sbjct: 762 EIMLNEVFLRIKDKGITLSVTEAFKERLVEEGYNPSYGARPLRRAVMRLLEDSLAEEVLS 821
Query: 655 REIKEGDSVIVDVDSDGNVTVLNGSSGA 682
IK+GD VD+D + V V + + GA
Sbjct: 822 GRIKDGDKAEVDIDENKKVVVKHINKGA 849
>gi|11467609|ref|NP_050661.1| Clp protease ATP binding subunit [Guillardia theta]
gi|5921798|sp|O78410.1|CLPC_GUITH RecName: Full=ATP-dependent Clp protease ATP-binding subunit clpA
homolog
gi|3602934|gb|AAC35595.1| Clp protease ATP binding subunit (chloroplast) [Guillardia theta]
Length = 819
Score = 996 bits (2576), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 488/646 (75%), Positives = 566/646 (87%), Gaps = 8/646 (1%)
Query: 16 GSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVG 75
G + K PTLEE+G+NLT+ A EGKLDPV+GRQ +IERV+QILGRRTKNNP LIGEPGVG
Sbjct: 153 GQTKGKTPTLEEFGSNLTQKAAEGKLDPVIGRQKEIERVIQILGRRTKNNPILIGEPGVG 212
Query: 76 KTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDE 135
KTAIAEGLAQRI + DVPD +E K+V+TLD+GLLVAGTKYRGEFEERLKK+++EI+ ++
Sbjct: 213 KTAIAEGLAQRINNRDVPDILEDKRVVTLDIGLLVAGTKYRGEFEERLKKIIDEIRVANN 272
Query: 136 IILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERR 195
+IL IDEVHTLIGAGAAEGAIDAANILKP+LARGE+QCIGATTL+EYRKHIEKD ALERR
Sbjct: 273 VILVIDEVHTLIGAGAAEGAIDAANILKPALARGEMQCIGATTLEEYRKHIEKDSALERR 332
Query: 196 FQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAID 255
FQPV V EPSV+ETI+IL GLR+RYE HHKL +DEAL +AA+ + QYI+DRFLPDKAID
Sbjct: 333 FQPVMVGEPSVEETIEILYGLRDRYEKHHKLVISDEALSAAAKFADQYIADRFLPDKAID 392
Query: 256 LIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQI 315
LIDEAGSRVRL ++QLP AREL+KELR+I K+K+EAVR QDFE AG+LRDREM++KAQI
Sbjct: 393 LIDEAGSRVRLMNSQLPPAARELDKELREILKQKDEAVRSQDFETAGQLRDREMEIKAQI 452
Query: 316 SALVD--KGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEET 373
+A+ KG E + E VVTE DI IV+AWTGIPV K++ ES++LL+MEET
Sbjct: 453 AAIAHSKKGDEENTKEV------SVVTEEDIAQIVAAWTGIPVNKMTRSESEKLLQMEET 506
Query: 374 LHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGS 433
LH R+IGQDEAV A+S+AIRRARVGLKNPNRPIASFIFSGPTGVGK+EL KALA+Y+FGS
Sbjct: 507 LHGRIIGQDEAVVAVSKAIRRARVGLKNPNRPIASFIFSGPTGVGKTELTKALASYFFGS 566
Query: 434 EEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPD 493
EEAM+RLDMSE+MERHTVSKLIGSPPGYVGY EGGQLTE+VRRRPYTVVLFDEIEK HPD
Sbjct: 567 EEAMVRLDMSEYMERHTVSKLIGSPPGYVGYNEGGQLTESVRRRPYTVVLFDEIEKGHPD 626
Query: 494 VFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSY 553
VFN++LQILEDGRLTDSKGRTVDFKNTLLI+TSNVGS VIEKGG +GFDL D+ +S Y
Sbjct: 627 VFNLLLQILEDGRLTDSKGRTVDFKNTLLILTSNVGSKVIEKGGGGLGFDLSEDQTESQY 686
Query: 554 NRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQ 613
RIK+LV EELKQYFRPEFLNRLDE+IVFRQLTK EV EIA+IMLKEVF R+ K I+L+
Sbjct: 687 GRIKALVNEELKQYFRPEFLNRLDEIIVFRQLTKDEVGEIAEIMLKEVFTRISEKGIQLE 746
Query: 614 VTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 659
VT RF+ ++ EGYNP YGARPLRRA+MRLLED+++E+ LA +IKE
Sbjct: 747 VTARFKTHLINEGYNPIYGARPLRRAVMRLLEDTLSEEFLAEKIKE 792
>gi|116072469|ref|ZP_01469736.1| ATPase [Synechococcus sp. BL107]
gi|116064991|gb|EAU70750.1| ATPase [Synechococcus sp. BL107]
Length = 843
Score = 996 bits (2575), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 489/666 (73%), Positives = 573/666 (86%), Gaps = 10/666 (1%)
Query: 20 NKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAI 79
K PTL+E+G NLT+LA E KLDPVVGR +I+RV+QILGRRTKNNP LIGEPGVGKTAI
Sbjct: 161 TKTPTLDEFGNNLTQLATESKLDPVVGRHNEIDRVIQILGRRTKNNPVLIGEPGVGKTAI 220
Query: 80 AEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILF 139
AEGLAQRI GD+PD +E K+V+TLD+GLLVAGTKYRGEFEERLKK+MEEIK + +IL
Sbjct: 221 AEGLAQRIQQGDIPDILEDKRVLTLDIGLLVAGTKYRGEFEERLKKIMEEIKSAGNVILV 280
Query: 140 IDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPV 199
IDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTLDEYRKHIE+D ALERRFQPV
Sbjct: 281 IDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIERDAALERRFQPV 340
Query: 200 KVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDE 259
V EPS+D+TI+IL+GLRERYE HH+L+ TDEALV+AA L +YISDRFLPDKAIDLIDE
Sbjct: 341 NVGEPSIDDTIEILRGLRERYEQHHRLKITDEALVAAATLGDRYISDRFLPDKAIDLIDE 400
Query: 260 AGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALV 319
AGSRVRL +++LP EA+E++KELR + K+K +AVR QDF KAGELR++E++L+ +I AL+
Sbjct: 401 AGSRVRLMNSKLPPEAKEVDKELRTVQKDKEDAVRDQDFAKAGELREKEVELREKIRALM 460
Query: 320 DKGKEMSKAETEAG---------DVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKM 370
+ S+ + D P+V+E DI HIV++WTG+PV+K++ ES +LL M
Sbjct: 461 QTSRSSSEEASSDESAVTTPAVVDTTPMVSEEDIAHIVASWTGVPVQKLTESESVKLLNM 520
Query: 371 EETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYY 430
EETLH+R+IGQDEAVKA+S+AIRRARVGLKNPNRPIASFIFSGPTGVGK+EL KALA Y+
Sbjct: 521 EETLHQRLIGQDEAVKAVSKAIRRARVGLKNPNRPIASFIFSGPTGVGKTELTKALATYF 580
Query: 431 FGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKA 490
FGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVG+ EGGQLTEAVRRRPYTVVLFDEIEKA
Sbjct: 581 FGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGFNEGGQLTEAVRRRPYTVVLFDEIEKA 640
Query: 491 HPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDE-K 549
HPDVFN++LQ+LEDGRLTDSKGRTVDFKNTL+IMTSN+GS VIEKGG +GF+ + +
Sbjct: 641 HPDVFNLLLQLLEDGRLTDSKGRTVDFKNTLVIMTSNIGSKVIEKGGGGLGFEFSGESAE 700
Query: 550 DSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKD 609
DS Y RI+SLV EELKQYFRPEFLNRLDE+IVFRQL + EVKEIA+IMLKEVF R+ K
Sbjct: 701 DSQYTRIRSLVNEELKQYFRPEFLNRLDEIIVFRQLNREEVKEIAEIMLKEVFGRMGEKG 760
Query: 610 IELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDS 669
I L V++ F+ER+VEEGYNP+YGARPLRRA+MRLLEDS+AE++L IK+GD VDVD
Sbjct: 761 ITLTVSDAFKERLVEEGYNPAYGARPLRRAVMRLLEDSLAEEVLTGRIKDGDHAEVDVDE 820
Query: 670 DGNVTV 675
+ V V
Sbjct: 821 NKKVVV 826
>gi|71842249|ref|YP_277337.1| Clp protease ATP binding subunit [Emiliania huxleyi]
gi|52547750|gb|AAU81910.1| Clp protease ATP binding subunit [Emiliania huxleyi]
gi|60101492|gb|AAX13836.1| Clp protease ATP binding subunit [Emiliania huxleyi]
gi|336286162|gb|AEI29498.1| Clp protease ATP binding subunit [Emiliania huxleyi]
Length = 817
Score = 995 bits (2572), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 496/677 (73%), Positives = 589/677 (87%), Gaps = 7/677 (1%)
Query: 2 VGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRR 61
+GEST+ V AG ++ +K PTLEE+GTNLT+ A EG+LDPVVGR +IERV+QILGRR
Sbjct: 142 LGESTD-VAAG-NSSTTRSKTPTLEEFGTNLTQKATEGRLDPVVGRSKEIERVIQILGRR 199
Query: 62 TKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEE 121
TKNNP LIGEPGVGKTA+AEGLAQRIA+ DVPDT+E K+V+ LD+GLL+AGTKYRGEFEE
Sbjct: 200 TKNNPVLIGEPGVGKTAVAEGLAQRIANRDVPDTLEDKRVVALDIGLLIAGTKYRGEFEE 259
Query: 122 RLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDE 181
RLKK+M+E++ ++ IIL IDEVHTLIGAGAAEGAIDAANILKP+L+RGELQCIGATT++E
Sbjct: 260 RLKKIMDEVRTANNIILVIDEVHTLIGAGAAEGAIDAANILKPALSRGELQCIGATTIEE 319
Query: 182 YRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSY 241
YRKHIEKD ALERRFQPV V EP+V+ETI+IL GLR+RYE HHKL +DEAL +AA+ +
Sbjct: 320 YRKHIEKDAALERRFQPVMVGEPTVEETIEILYGLRDRYERHHKLVISDEALAAAAKFAD 379
Query: 242 QYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKA 301
QYI+DRFLPDKAIDLIDEAGSRVRL ++QLP A+ L++ELR + K K+EAVR QDFEKA
Sbjct: 380 QYIADRFLPDKAIDLIDEAGSRVRLLNSQLPPAAKLLDQELRDVLKSKDEAVRNQDFEKA 439
Query: 302 GELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVST 361
G+LR+REM+++AQI+A++ K+ S + P VTE DI IV+AWT IPV K++
Sbjct: 440 GQLREREMEVRAQINAVIQVSKDPSSSVPT-----PTVTEEDIAQIVAAWTSIPVNKLTK 494
Query: 362 DESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSE 421
ES++LL+MEETLH R+IGQDEAV A+SRAIRRARVGLKNPNRPIASF+FSGPTGVGK+E
Sbjct: 495 SESEKLLQMEETLHSRIIGQDEAVVAVSRAIRRARVGLKNPNRPIASFLFSGPTGVGKTE 554
Query: 422 LAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTV 481
L KALA Y+FGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGY EGGQLTEAVRRRPYTV
Sbjct: 555 LTKALATYFFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYNEGGQLTEAVRRRPYTV 614
Query: 482 VLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIG 541
VLFDE+EKAHPDVFN+MLQI EDGRLTDSKGR +DFKNTLLIMTSN+GS VIEKGG +G
Sbjct: 615 VLFDEVEKAHPDVFNLMLQIFEDGRLTDSKGRVIDFKNTLLIMTSNIGSKVIEKGGGGLG 674
Query: 542 FDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEV 601
F+L D+ +S+YNRIKSLV EELKQYFRPEFLNRLDE+IVFRQLTK EV EIA+IMLKEV
Sbjct: 675 FELGEDQDNSAYNRIKSLVNEELKQYFRPEFLNRLDEIIVFRQLTKSEVGEIAEIMLKEV 734
Query: 602 FDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGD 661
FDR+ K IEL VT+RF+ R+++EGYNP+YGARPLRRA+MRLLEDS++E++L+ ++ GD
Sbjct: 735 FDRISQKGIELAVTDRFKARLIDEGYNPAYGARPLRRAVMRLLEDSLSEEVLSERLQSGD 794
Query: 662 SVIVDVDSDGNVTVLNG 678
+ +VDVD +G V VL
Sbjct: 795 AAVVDVDENGKVQVLTA 811
>gi|72382499|ref|YP_291854.1| Clp protease ATP-binding subunit [Prochlorococcus marinus str.
NATL2A]
gi|72002349|gb|AAZ58151.1| ATPase [Prochlorococcus marinus str. NATL2A]
Length = 855
Score = 995 bits (2572), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 498/712 (69%), Positives = 590/712 (82%), Gaps = 26/712 (3%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
M+GE+ E V G G K TL+E+GTNLT+LA E KLDPVVGR +I+RV+QILGR
Sbjct: 141 MLGETAE-VTTGSGSSKGSAKTATLDEFGTNLTQLASESKLDPVVGRHSEIDRVIQILGR 199
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNP LIGEPGVGKTAIAEGLAQRI G++PD +E K+V+TLD+GLLVAGTKYRGEFE
Sbjct: 200 RTKNNPVLIGEPGVGKTAIAEGLAQRIQQGNIPDILEEKRVLTLDIGLLVAGTKYRGEFE 259
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
ERLKK+MEEIK + +IL IDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTLD
Sbjct: 260 ERLKKIMEEIKSAGNVILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLD 319
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRKHIE+D ALERRFQPV + EPS+ +TI+ILKGLRERYE HH+L+ TDEAL +AA L
Sbjct: 320 EYRKHIERDAALERRFQPVMIGEPSIKDTIEILKGLRERYEQHHRLKITDEALDAAANLG 379
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
+YISDRFLPDKAIDLIDEAGSRVRL +++LP EA+E++KELR+I K K EAVR Q+F +
Sbjct: 380 DRYISDRFLPDKAIDLIDEAGSRVRLLNSKLPPEAKEVDKELRKIQKSKEEAVRDQNFTQ 439
Query: 301 AGELRDREMDLKAQISALVDKGKEMSKAE--------------------TEAGDVG---P 337
AGELR++E++L+ +I L+ ++ T++ D+ P
Sbjct: 440 AGELREKEVELRDKIRNLLQNIRQKPSTNENPNSNNVPQENNESSDQLITQSDDLKVSQP 499
Query: 338 VVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARV 397
VV E DI HIV++WTG+PV+K++ ES +LL ME+TLH+R+IGQDEAVKA+S+AIRRARV
Sbjct: 500 VVNEEDIAHIVASWTGVPVQKLTESESVKLLNMEDTLHQRLIGQDEAVKAVSKAIRRARV 559
Query: 398 GLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGS 457
GLKNPNRPIASFIFSGPTGVGK+EL KALAAY+FGSEEAMIRLDMSEFMERHTVSKLIGS
Sbjct: 560 GLKNPNRPIASFIFSGPTGVGKTELTKALAAYFFGSEEAMIRLDMSEFMERHTVSKLIGS 619
Query: 458 PPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDF 517
PPGYVG+ EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFN++LQ+LE+GRLTDSKGRTVDF
Sbjct: 620 PPGYVGFNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNLLLQLLEEGRLTDSKGRTVDF 679
Query: 518 KNTLLIMTSNVGSSVIEKGGRRIGFDLDYDE-KDSSYNRIKSLVTEELKQYFRPEFLNRL 576
KNTL+IMTSN+GS VIEKGG +GF+ + +D+ YNRIKSLV EELKQYFRPEFLNRL
Sbjct: 680 KNTLVIMTSNIGSKVIEKGGGGLGFEFSGENLEDTQYNRIKSLVNEELKQYFRPEFLNRL 739
Query: 577 DEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPL 636
DE+IVFRQL++ EVK+IA+IMLKEVF R+K K I L V+E F+ER+VEEGYNPSYGARPL
Sbjct: 740 DEIIVFRQLSRDEVKDIAEIMLKEVFLRIKDKGISLTVSEDFKERLVEEGYNPSYGARPL 799
Query: 637 RRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTVLN-GSSGAPESLA 687
RRA+MRLLEDS+AE++L+ IK+GD VD+D V V + G G+ LA
Sbjct: 800 RRAVMRLLEDSLAEEVLSGRIKDGDKAEVDIDESKKVIVKHLGKDGSKPELA 851
>gi|452821448|gb|EME28478.1| [pt] ATP-dependent Clp protease ATP-binding subunit ClpB [Galdieria
sulphuraria]
Length = 847
Score = 994 bits (2571), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 478/680 (70%), Positives = 580/680 (85%), Gaps = 5/680 (0%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
++ E +E V A G +K PTLEE+G NLT+LA EGKLDPVVGR+ +IERV+QILGR
Sbjct: 141 LIIEESEFVNAN-AYGYVRSKTPTLEEFGVNLTQLAIEGKLDPVVGREKEIERVIQILGR 199
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNP LIGEPGVGKTAIAEGLAQRIA DVP+ +E K+V+ LD+GLL+AGTKYRGEFE
Sbjct: 200 RTKNNPVLIGEPGVGKTAIAEGLAQRIAKQDVPNLLEDKQVVNLDIGLLIAGTKYRGEFE 259
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
ERLK++++EI+ + +IL IDEVHTLIGAGAAEGAIDAANILKP LARGELQCIGATTL+
Sbjct: 260 ERLKRIIDEIRAINNVILVIDEVHTLIGAGAAEGAIDAANILKPILARGELQCIGATTLE 319
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRKHIEKD ALERRFQP+ V EP+V+ETI+IL GLR+RYE+HHKL +DEAL +AA+L+
Sbjct: 320 EYRKHIEKDAALERRFQPIIVGEPTVEETIEILYGLRDRYELHHKLVISDEALNAAAKLA 379
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
+QYISDRFLPDKAIDL+DEAGSRVRL A+ P+ L+KEL++I K+K EA+R QDF +
Sbjct: 380 HQYISDRFLPDKAIDLVDEAGSRVRLMQAKTPKIESNLDKELKEILKQKEEAIRSQDFTQ 439
Query: 301 AGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVS 360
A LR+RE+++K+QI AL K SK E + PVVTE DI +VS+WTGIP+ K++
Sbjct: 440 ATNLREREIEIKSQIVALAKSKKIESKVEKDP----PVVTEEDIAAVVSSWTGIPLSKLT 495
Query: 361 TDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 420
ES++LL MEETLH R+IGQDEAV A+SRAIRRARVGLKNPNRPIASFIFSGPTGVGK+
Sbjct: 496 KSESEKLLNMEETLHSRIIGQDEAVSAVSRAIRRARVGLKNPNRPIASFIFSGPTGVGKT 555
Query: 421 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 480
EL KALA+Y+FGSE AM+RLDMSE+MERHTVSKLIGSPPGYVGY EGGQLTE VRR+PYT
Sbjct: 556 ELTKALASYFFGSESAMVRLDMSEYMERHTVSKLIGSPPGYVGYNEGGQLTEVVRRKPYT 615
Query: 481 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI 540
V+LFDEIEKAHPDVFN++LQILEDGRLTD+KG TVDFKNTLLIMTSN+GS VI+KGG +
Sbjct: 616 VILFDEIEKAHPDVFNILLQILEDGRLTDAKGHTVDFKNTLLIMTSNIGSKVIDKGGSNL 675
Query: 541 GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 600
GF+L + +S YNRI+SLV EELKQYFRPEF+NRLDE+IVFRQLTK EV EIA++MLKE
Sbjct: 676 GFELSASQMESHYNRIRSLVNEELKQYFRPEFINRLDEIIVFRQLTKNEVGEIANLMLKE 735
Query: 601 VFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEG 660
VFDRL+ K+I+++VT+RF+ R++EEGYNP YGARPLRRA+MRLLED +AE++L++ ++
Sbjct: 736 VFDRLEKKNIKIEVTDRFKGRLIEEGYNPVYGARPLRRAVMRLLEDKLAEEILSQRLQAS 795
Query: 661 DSVIVDVDSDGNVTVLNGSS 680
D+ +VD+D + V +L +
Sbjct: 796 DTAVVDLDENNQVIILTSKN 815
>gi|33863332|ref|NP_894892.1| protein ClpC [Prochlorococcus marinus str. MIT 9313]
gi|33640781|emb|CAE21236.1| ClpC [Prochlorococcus marinus str. MIT 9313]
Length = 859
Score = 994 bits (2570), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 502/714 (70%), Positives = 597/714 (83%), Gaps = 31/714 (4%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
M+GE+ E V AG GGG K TL+E+G+NLT+LA E KLDPVVGRQ +I+RV+QILGR
Sbjct: 141 MLGETAE-VTAGGGGGKGSTKTATLDEFGSNLTQLANESKLDPVVGRQNEIDRVIQILGR 199
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNP LIGEPGVGKTAIAEGLAQRI GD+PD +E K+V+TLD+GLLVAGTKYRGEFE
Sbjct: 200 RTKNNPVLIGEPGVGKTAIAEGLAQRIQQGDIPDILEEKRVLTLDIGLLVAGTKYRGEFE 259
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
ERLKK+MEEIK + +IL IDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTLD
Sbjct: 260 ERLKKIMEEIKAAGNVILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLD 319
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRKHIE+D ALERRFQPV V EPS+ ETI+IL+GLRERYE HH+L+ TDEAL +AA L
Sbjct: 320 EYRKHIERDAALERRFQPVMVGEPSIAETIEILQGLRERYEQHHRLKITDEALDAAANLG 379
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
+YISDRFLPDKAIDLIDEAGSRVRL +++LP A+E++KELR++ KEK +AVR QDF K
Sbjct: 380 DRYISDRFLPDKAIDLIDEAGSRVRLLNSKLPPAAKEVDKELRKVQKEKEDAVRDQDFAK 439
Query: 301 AGELRDREMDLKAQISALVDKGKEMSK----AETE----AGD------------------ 334
AGELR++E++L+ +I L+ ++ S+ AE E + D
Sbjct: 440 AGELREKEVELREKIRTLLQSSRQGSEESPPAEAENAVRSSDETPTPQPEKNTTAALIPH 499
Query: 335 -VGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIR 393
P+VTE DI +IV+AWTG+PV+K++ ES +LL MEETLH+R+IGQDEAVKA+S+AIR
Sbjct: 500 LTTPLVTEEDIANIVAAWTGVPVQKLTESESVKLLNMEETLHQRLIGQDEAVKAVSKAIR 559
Query: 394 RARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSK 453
RARVGLKNPNRPIASFIFSGPTGVGK+EL KALA Y+FGSEEAMIRLDMSEFMERHTVSK
Sbjct: 560 RARVGLKNPNRPIASFIFSGPTGVGKTELTKALATYFFGSEEAMIRLDMSEFMERHTVSK 619
Query: 454 LIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGR 513
LIGSPPGYVG+ EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFN++LQ+LEDGRLTDSKGR
Sbjct: 620 LIGSPPGYVGFNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNLLLQLLEDGRLTDSKGR 679
Query: 514 TVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLD-YDEKDSSYNRIKSLVTEELKQYFRPEF 572
TVDFKNTL+IMTSN+GS VIEKGG +GF+ + +DS YNRIKSLV EELKQYFRPEF
Sbjct: 680 TVDFKNTLIIMTSNIGSKVIEKGGGGLGFEFSGENAEDSQYNRIKSLVNEELKQYFRPEF 739
Query: 573 LNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYG 632
LNRLDE+IVFRQL++ EVKEIA+IML+EVF R++ K I L V++ F+ER+VEEGYNPSYG
Sbjct: 740 LNRLDEIIVFRQLSRNEVKEIAEIMLQEVFSRMQDKGITLTVSDAFKERLVEEGYNPSYG 799
Query: 633 ARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTV--LNGSSGAPE 684
ARPLRRA+MRL+EDS+AE++L IK+GD+ +DVD + + V ++ ++ PE
Sbjct: 800 ARPLRRAVMRLMEDSLAEEVLTGRIKDGDAAEMDVDDNKQIVVRHVSKTTATPE 853
>gi|87303420|ref|ZP_01086208.1| endopeptidase Clp ATP-binding chain C [Synechococcus sp. WH 5701]
gi|87282068|gb|EAQ74030.1| endopeptidase Clp ATP-binding chain C [Synechococcus sp. WH 5701]
Length = 856
Score = 994 bits (2570), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 503/713 (70%), Positives = 597/713 (83%), Gaps = 27/713 (3%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
M+GE+ E V AG GG K PTL+E+G+NLT+LA EGKLDPVVGR +I+RVVQILGR
Sbjct: 141 MLGETAE-VTAGGGGSKGSTKTPTLDEFGSNLTQLAAEGKLDPVVGRHNEIDRVVQILGR 199
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNP LIGEPGVGKTAIAEGLAQRI G+VPD +E K+V+TLD+GLLVAGTKYRGEFE
Sbjct: 200 RTKNNPVLIGEPGVGKTAIAEGLAQRIIIGEVPDILEDKRVLTLDIGLLVAGTKYRGEFE 259
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
ERLKK+MEEI+ + +IL IDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTLD
Sbjct: 260 ERLKKIMEEIRGAGNVILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLD 319
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRKHIE+D ALERRFQPV V EPSV +TI+IL+GLRERYE HH+L+ +DEALV+AA L
Sbjct: 320 EYRKHIERDAALERRFQPVMVGEPSVVDTIEILRGLRERYEQHHRLKISDEALVAAATLG 379
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
+YISDRFLPDKAIDL+DEAGSRVRL +++LP A+EL+K+LR I K+K ++VR QDF K
Sbjct: 380 DRYISDRFLPDKAIDLVDEAGSRVRLMNSKLPPAAKELDKQLRAIQKQKEDSVRQQDFGK 439
Query: 301 AGELRDREMDLKAQISALVD-------------KGKEMSKAETEA------------GDV 335
AGELRD+E++L+ QI +++ +G + AE +A G+
Sbjct: 440 AGELRDKEVELRDQIRSILQARRDEEPVASTAVEGSAEATAEAKASTAADNALASSSGER 499
Query: 336 GPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRA 395
PVVTE DI IV++WTG+PV+K++ ES +LL MEETLH+R+IGQDEAVKA+S+AIRRA
Sbjct: 500 HPVVTEEDIAQIVASWTGVPVQKLTESESVKLLNMEETLHQRLIGQDEAVKAVSKAIRRA 559
Query: 396 RVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLI 455
RVGLKNPNRPIASFIFSGPTGVGK+EL KALAAY+FGSEEAMIRLDMSEFMERHTVSKLI
Sbjct: 560 RVGLKNPNRPIASFIFSGPTGVGKTELTKALAAYFFGSEEAMIRLDMSEFMERHTVSKLI 619
Query: 456 GSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTV 515
GSPPGYVG+ EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFN++LQ+LEDGRLTDSKGRTV
Sbjct: 620 GSPPGYVGFNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNLLLQLLEDGRLTDSKGRTV 679
Query: 516 DFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDE-KDSSYNRIKSLVTEELKQYFRPEFLN 574
DFKNTL+IMTSN+GS VIEKGG +GF+ +++ YNRI+SLV EELKQYFRPEFLN
Sbjct: 680 DFKNTLIIMTSNIGSKVIEKGGGGLGFEFSGAAVEETQYNRIRSLVNEELKQYFRPEFLN 739
Query: 575 RLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGAR 634
RLDE+IVFRQL++ EVKEIA+IML+EVF R++ K I L VTE F+ER+VEEGYNPSYGAR
Sbjct: 740 RLDEIIVFRQLSRDEVKEIAEIMLREVFGRMQEKGIGLSVTEAFKERLVEEGYNPSYGAR 799
Query: 635 PLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNGSSGAPESLA 687
PLRRA+MRLLEDS+AE+ L+ +K+GDS +VDV+ + V + + + A LA
Sbjct: 800 PLRRAVMRLLEDSLAEEFLSGRLKDGDSALVDVNDEKQVVIRHQTVVAEPELA 852
>gi|124022698|ref|YP_001017005.1| protein ClpC [Prochlorococcus marinus str. MIT 9303]
gi|123962984|gb|ABM77740.1| ClpC [Prochlorococcus marinus str. MIT 9303]
Length = 859
Score = 993 bits (2566), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 502/714 (70%), Positives = 597/714 (83%), Gaps = 31/714 (4%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
M+GE+ E V AG GGG K TL+E+G+NLT+LA E KLDPVVGRQ +I+RV+QILGR
Sbjct: 141 MLGETAE-VTAGGGGGKGSTKTATLDEFGSNLTQLANESKLDPVVGRQNEIDRVIQILGR 199
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNP LIGEPGVGKTAIAEGLAQRI GD+PD +E K+V+TLD+GLLVAGTKYRGEFE
Sbjct: 200 RTKNNPVLIGEPGVGKTAIAEGLAQRIQQGDIPDILEEKRVLTLDIGLLVAGTKYRGEFE 259
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
ERLKK+MEEIK + +IL IDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTLD
Sbjct: 260 ERLKKIMEEIKSAGNVILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLD 319
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRKHIE+D ALERRFQPV V EPS+ ETI+IL+GLRERYE HH+L+ TDEAL +AA L
Sbjct: 320 EYRKHIERDAALERRFQPVMVGEPSIAETIEILQGLRERYEQHHRLKITDEALDAAANLG 379
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
+YISDRFLPDKAIDLIDEAGSRVRL +++LP A+E++KELR++ KEK +AVR QDF K
Sbjct: 380 DRYISDRFLPDKAIDLIDEAGSRVRLLNSKLPPAAKEVDKELRKVQKEKEDAVRDQDFAK 439
Query: 301 AGELRDREMDLKAQISALVDKGKEMSK----AETE----AGD------------------ 334
AGELR++E++L+ +I L+ ++ S+ AE E + D
Sbjct: 440 AGELREKEVELREKIRTLLQSSRQDSEESPPAEAENAVRSSDETPTPQPEKDTTAPSIPP 499
Query: 335 -VGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIR 393
P+VTE DI +IV+AWTG+PV+K++ ES +LL MEETLH+R+IGQDEAVKA+S+AIR
Sbjct: 500 LTTPLVTEEDIANIVAAWTGVPVQKLTESESVKLLNMEETLHQRLIGQDEAVKAVSKAIR 559
Query: 394 RARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSK 453
RARVGLKNPNRPIASFIFSGPTGVGK+EL KALA Y+FGSEEAMIRLDMSEFMERHTVSK
Sbjct: 560 RARVGLKNPNRPIASFIFSGPTGVGKTELTKALATYFFGSEEAMIRLDMSEFMERHTVSK 619
Query: 454 LIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGR 513
LIGSPPGYVG+ EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFN++LQ+LEDGRLTDSKGR
Sbjct: 620 LIGSPPGYVGFNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNLLLQLLEDGRLTDSKGR 679
Query: 514 TVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLD-YDEKDSSYNRIKSLVTEELKQYFRPEF 572
TVDFKNTL+IMTSN+GS VIEKGG +GF+ + ++S YNRIKSLV EELKQYFRPEF
Sbjct: 680 TVDFKNTLIIMTSNIGSKVIEKGGGGLGFEFSGENAEESQYNRIKSLVNEELKQYFRPEF 739
Query: 573 LNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYG 632
LNRLDE+IVFRQL++ EVKEIA+IMLKEVF R++ K I L V++ F+ER+VEEGYNPSYG
Sbjct: 740 LNRLDEIIVFRQLSRDEVKEIAEIMLKEVFSRMQDKGITLTVSDAFKERLVEEGYNPSYG 799
Query: 633 ARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTV--LNGSSGAPE 684
ARPLRRA+MRL+EDS+AE++L IK+GD+ +DVD + + V ++ ++ PE
Sbjct: 800 ARPLRRAVMRLMEDSLAEEVLTGRIKDGDAAEMDVDDNKQIVVRHVSKTTATPE 853
>gi|87124752|ref|ZP_01080600.1| endopeptidase Clp ATP-binding chain C [Synechococcus sp. RS9917]
gi|86167631|gb|EAQ68890.1| endopeptidase Clp ATP-binding chain C [Synechococcus sp. RS9917]
Length = 860
Score = 991 bits (2561), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 492/689 (71%), Positives = 581/689 (84%), Gaps = 26/689 (3%)
Query: 23 PTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEG 82
PTL+E+G+NLT+LA E KLDPVVGRQ +I+RV+QILGRRTKNNP LIGEPGVGKTAIAEG
Sbjct: 164 PTLDEFGSNLTQLASEAKLDPVVGRQNEIDRVIQILGRRTKNNPVLIGEPGVGKTAIAEG 223
Query: 83 LAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDE 142
LAQRI GD+PD +E K+V+TLD+GLLVAGTKYRGEFEERLKK+MEEIK + +IL IDE
Sbjct: 224 LAQRIQQGDIPDILEDKRVLTLDIGLLVAGTKYRGEFEERLKKIMEEIKAAGNVILVIDE 283
Query: 143 VHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVP 202
VHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTLDEYRKHIE+D ALERRFQPV V
Sbjct: 284 VHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIERDAALERRFQPVMVG 343
Query: 203 EPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGS 262
EP++ +TI+IL+GLRERYE HH+L+ TDEAL +AA L +YISDRFLPDKAIDLIDEAGS
Sbjct: 344 EPTITDTIEILRGLRERYEQHHRLKITDEALEAAATLGDRYISDRFLPDKAIDLIDEAGS 403
Query: 263 RVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKG 322
RVRL +++LP A+E++KELRQ+ KEK AVR QDF +AGELRD+E++L+ QI L+
Sbjct: 404 RVRLLNSKLPPAAKEVDKELRQVQKEKENAVREQDFTRAGELRDKEVELREQIRTLLQSN 463
Query: 323 KEMSKAETEA----GDVG--------------------PVVTEVDIQHIVSAWTGIPVEK 358
+ S A ++ D G PVV E DI IV++WTG+PV+K
Sbjct: 464 RSDSPASDDSPASNDDSGFTPAATDATTSQAVESELTTPVVGEEDIAQIVASWTGVPVQK 523
Query: 359 VSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVG 418
++ ES +LL MEETLH+R+IGQDEAVKA+S+AIRRARVGLKNPNRPIASFIFSGPTGVG
Sbjct: 524 LTESESVKLLNMEETLHQRLIGQDEAVKAVSKAIRRARVGLKNPNRPIASFIFSGPTGVG 583
Query: 419 KSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRP 478
K+EL KALA Y+FGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVG+ EGGQLTEAVRRRP
Sbjct: 584 KTELTKALATYFFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGFNEGGQLTEAVRRRP 643
Query: 479 YTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR 538
YTVVLFDEIEKAHPDVFN++LQ+LEDGRLTDSKGRTVDFKNTL+IMTSN+GS VIEKGG
Sbjct: 644 YTVVLFDEIEKAHPDVFNLLLQLLEDGRLTDSKGRTVDFKNTLVIMTSNIGSKVIEKGGG 703
Query: 539 RIGFDLD-YDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIM 597
+GF+ + +++ YNRI+SLV EELKQYFRPEFLNRLDE+IVFRQL + EVKEIA+IM
Sbjct: 704 GLGFEFSGENAEENQYNRIRSLVNEELKQYFRPEFLNRLDEIIVFRQLNREEVKEIAEIM 763
Query: 598 LKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREI 657
L+EVF R+ K I L V++ F+ER+VEEGYNP+YGARPLRRA+MRLLEDS+AE++L+ I
Sbjct: 764 LREVFSRIGEKGITLTVSDAFKERLVEEGYNPAYGARPLRRAVMRLLEDSLAEEVLSGRI 823
Query: 658 KEGDSVIVDVDSDGNVTVLNGS-SGAPES 685
K+GD+V VDVD + V V +G+ S AP +
Sbjct: 824 KDGDAVEVDVDENKQVVVRHGTNSPAPAT 852
>gi|88808913|ref|ZP_01124422.1| ATPase [Synechococcus sp. WH 7805]
gi|88786855|gb|EAR18013.1| ATPase [Synechococcus sp. WH 7805]
Length = 857
Score = 991 bits (2561), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 490/679 (72%), Positives = 575/679 (84%), Gaps = 24/679 (3%)
Query: 20 NKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAI 79
K PTL+E+G NLT+LA E KLDPVVGR +I+RV+QILGRRTKNNP LIGEPGVGKTAI
Sbjct: 162 TKTPTLDEFGNNLTQLAGEAKLDPVVGRHNEIDRVIQILGRRTKNNPVLIGEPGVGKTAI 221
Query: 80 AEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILF 139
AEGLAQRI GD+PD +E K+V+TLD+GLLVAGTKYRGEFEERLKK+MEEIK + +IL
Sbjct: 222 AEGLAQRIQQGDIPDILEDKRVLTLDIGLLVAGTKYRGEFEERLKKIMEEIKSAGNVILV 281
Query: 140 IDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPV 199
IDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTLDEYRKHIE+D ALERRFQPV
Sbjct: 282 IDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIERDAALERRFQPV 341
Query: 200 KVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDE 259
V EPS+++TI+IL+GLRERYE HH+LR TDEAL +AA L +YISDRFLPDKAIDLIDE
Sbjct: 342 MVGEPSIEDTIEILRGLRERYEQHHRLRITDEALEAAATLGDRYISDRFLPDKAIDLIDE 401
Query: 260 AGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALV 319
AGSRVRL +++LP EA+E++KELR + KEK +AVR QDF +AGELRD+E++L+ +I +L+
Sbjct: 402 AGSRVRLLNSKLPPEAKEVDKELRSVQKEKEDAVREQDFTRAGELRDKEVELRDKIRSLL 461
Query: 320 DKGKEMSKAETEAGD----------------------VGPVVTEVDIQHIVSAWTGIPVE 357
++ AE +A D PVV E DI IV++WTG+PV+
Sbjct: 462 QTSRQDIPAEQQASDENSGEPALATEGSETSESAVTGTTPVVNEEDIAQIVASWTGVPVQ 521
Query: 358 KVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGV 417
K++ ES +LL MEETLHKR+IGQDEAVKA+S+AIRRARVGLKNPNRPIASFIFSGPTGV
Sbjct: 522 KLTESESVKLLNMEETLHKRLIGQDEAVKAVSKAIRRARVGLKNPNRPIASFIFSGPTGV 581
Query: 418 GKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRR 477
GK+EL KALAAY+FGSE+AMIRLDMSEFMERHTVSKLIGSPPGYVG+ EGGQLTEAVRRR
Sbjct: 582 GKTELTKALAAYFFGSEDAMIRLDMSEFMERHTVSKLIGSPPGYVGFNEGGQLTEAVRRR 641
Query: 478 PYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGG 537
PYTVVLFDEIEKAHPDVFN++LQ+LEDGRLTDSKGRTVDFKNTL+IMTSN+GS VIEKGG
Sbjct: 642 PYTVVLFDEIEKAHPDVFNLLLQLLEDGRLTDSKGRTVDFKNTLIIMTSNIGSKVIEKGG 701
Query: 538 RRIGFDLD-YDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADI 596
+GF+ + +++ YNRI+SLV EELKQYFRPEFLNRLDE+IVFRQL + EVKEIA+I
Sbjct: 702 GGLGFEFSGENAEENQYNRIRSLVNEELKQYFRPEFLNRLDEIIVFRQLNRDEVKEIAEI 761
Query: 597 MLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLARE 656
ML+EVF R+ K I L V++ F+ER+VEEGYNP+YGARPLRRA+MRLLEDS+AE++L
Sbjct: 762 MLREVFGRIGEKGITLTVSDAFKERLVEEGYNPAYGARPLRRAVMRLLEDSLAEEVLTGR 821
Query: 657 IKEGDSVIVDVDSDGNVTV 675
IK+GD VDV+ DG V V
Sbjct: 822 IKDGDEAEVDVE-DGKVVV 839
>gi|33865472|ref|NP_897031.1| endopeptidase Clp ATP-binding chain C [Synechococcus sp. WH 8102]
gi|33632641|emb|CAE07453.1| endopeptidase Clp ATP-binding chain C [Synechococcus sp. WH 8102]
Length = 846
Score = 988 bits (2553), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 490/675 (72%), Positives = 582/675 (86%), Gaps = 14/675 (2%)
Query: 1 MVGESTEAVGAGVGGGSSGN-KMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 59
M+GE+ E G G GGG+ G+ K PTL+E+G+NLT++A E KLDPVVGR +IERV+QILG
Sbjct: 141 MLGETAEVSGGGGGGGAKGSTKTPTLDEFGSNLTQMANEAKLDPVVGRHNEIERVIQILG 200
Query: 60 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 119
RRTKNNP LIGEPGVGKTAIAEGLAQRI G++PD +E K+V+TLD+GLLVAGTKYRGEF
Sbjct: 201 RRTKNNPVLIGEPGVGKTAIAEGLAQRIQQGEIPDILEDKRVLTLDIGLLVAGTKYRGEF 260
Query: 120 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 179
EERLKK+MEEIK + +IL IDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTL
Sbjct: 261 EERLKKIMEEIKAAGNVILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTL 320
Query: 180 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 239
DEYRKHIE+D ALERRFQPV V EPS+D+TI+IL+GLRERYE HH+L+ TD+ALV+AA L
Sbjct: 321 DEYRKHIERDAALERRFQPVNVGEPSIDDTIEILRGLRERYEQHHRLKITDDALVAAATL 380
Query: 240 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 299
+YISDRFLPDKAIDLIDEAGSRVRL +++LP EA+E++KELR + K+K +AVR QDF
Sbjct: 381 GDRYISDRFLPDKAIDLIDEAGSRVRLLNSKLPPEAKEVDKELRGVQKQKEDAVRDQDFT 440
Query: 300 KAGELRDREMDLKAQISALVDKGKEMSKAETEA------------GDVGPVVTEVDIQHI 347
KAGELR++E++L+ QI +L+ + + A EA + P+V E DI I
Sbjct: 441 KAGELREKEVELRDQIRSLLQANRTDATAVAEASADQSDAPAAESAESSPMVNEEDIAQI 500
Query: 348 VSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIA 407
V++WTG+PV+K++ ES +LL MEETLH+R+IGQDEAVKA+S+AIRRARVGLKNPNRPIA
Sbjct: 501 VASWTGVPVQKLTESESVKLLNMEETLHQRLIGQDEAVKAVSKAIRRARVGLKNPNRPIA 560
Query: 408 SFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEG 467
SFIFSGPTGVGK+EL KALA Y+FGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVG+ EG
Sbjct: 561 SFIFSGPTGVGKTELTKALATYFFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGFNEG 620
Query: 468 GQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSN 527
GQLTEAVRRRPYTVVLFDEIEKAHPDVFN++LQ+LEDGRLTDSKGRTVDFKNTL+IMTSN
Sbjct: 621 GQLTEAVRRRPYTVVLFDEIEKAHPDVFNLLLQLLEDGRLTDSKGRTVDFKNTLVIMTSN 680
Query: 528 VGSSVIEKGGRRIGFDLDYDE-KDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLT 586
+GS VIEKGG +GF+ + ++S Y RI+SLV EELKQYFRPEFLNRLDE+IVFRQL+
Sbjct: 681 IGSKVIEKGGGGLGFEFSGESAEESQYTRIRSLVNEELKQYFRPEFLNRLDEIIVFRQLS 740
Query: 587 KLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLED 646
+ EVKEIA+IMLKEVF R+ K I L V++ F+ER+VEEGYNP+YGARPLRRA+MRLLED
Sbjct: 741 RDEVKEIAEIMLKEVFGRMGEKGITLTVSDAFKERLVEEGYNPAYGARPLRRAVMRLLED 800
Query: 647 SMAEKMLAREIKEGD 661
S+AE++L+ IK+GD
Sbjct: 801 SLAEEVLSGRIKDGD 815
>gi|352093666|ref|ZP_08954837.1| ATPase AAA-2 domain protein [Synechococcus sp. WH 8016]
gi|351680006|gb|EHA63138.1| ATPase AAA-2 domain protein [Synechococcus sp. WH 8016]
Length = 860
Score = 985 bits (2546), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 504/717 (70%), Positives = 589/717 (82%), Gaps = 29/717 (4%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
M+GE+ E G GG K PTL+E+GTNLT+LA E KLDPVVGR +I+RV+QILGR
Sbjct: 141 MLGETAEVGAGGGGGAKGSTKTPTLDEFGTNLTQLATESKLDPVVGRHKEIDRVIQILGR 200
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNP LIGEPGVGKTAIAEGLAQRI GD+PD +E K+V+TLD+GLLVAGTKYRGEFE
Sbjct: 201 RTKNNPVLIGEPGVGKTAIAEGLAQRIQQGDIPDILEEKRVLTLDIGLLVAGTKYRGEFE 260
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
ERLKK+MEEIK + +IL IDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTLD
Sbjct: 261 ERLKKIMEEIKSAGNVILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLD 320
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRKHIE+D ALERRFQPV V EPS+ +TI+IL+GLRERYE HH+L+ TD AL +AA L
Sbjct: 321 EYRKHIERDAALERRFQPVTVGEPSIPDTIEILRGLRERYEQHHRLKITDAALDAAATLG 380
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
+YISDRFLPDKAIDLIDEAGSRVRL +++LP A+E++KELR + KEK +AVR QDF +
Sbjct: 381 DRYISDRFLPDKAIDLIDEAGSRVRLLNSKLPPAAKEVDKELRAVQKEKEDAVRDQDFGR 440
Query: 301 AGELRDREMDLKAQISALVDKGKEMS------KAETEAGDVG------------------ 336
AGELRD+E++L+ +I L+ +E S +T G VG
Sbjct: 441 AGELRDKEVELREKIRTLLQSSREESPVNSGDTGQTSEGAVGEALSSDSAEGSTAQPQLL 500
Query: 337 --PVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRR 394
P+V E DI HIV++WTG+PV+K++ ES +LL MEETLHKR+IGQDEAVKA+S+AIRR
Sbjct: 501 TTPIVDEEDIAHIVASWTGVPVQKLTESESVKLLNMEETLHKRLIGQDEAVKAVSKAIRR 560
Query: 395 ARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKL 454
ARVGLKNPNRPIASFIFSGPTGVGK+EL KALAAY+FGSEEAMIRLDMSEFMERHTVSKL
Sbjct: 561 ARVGLKNPNRPIASFIFSGPTGVGKTELTKALAAYFFGSEEAMIRLDMSEFMERHTVSKL 620
Query: 455 IGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRT 514
IGSPPGYVG+ EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFN++LQ+LEDGRLTDSKGRT
Sbjct: 621 IGSPPGYVGFNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNLLLQLLEDGRLTDSKGRT 680
Query: 515 VDFKNTLLIMTSNVGSSVIEKGGRRIGFDLD-YDEKDSSYNRIKSLVTEELKQYFRPEFL 573
VDFKNTL+IMTSN+GS VIEKGG +GF+ + +++ YNRIKSLV EELKQYFRPEFL
Sbjct: 681 VDFKNTLIIMTSNIGSKVIEKGGGGLGFEFSGENAEENQYNRIKSLVNEELKQYFRPEFL 740
Query: 574 NRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGA 633
NRLDE+IVFRQL + EVK+IA+IMLKEVF R+ K I L V+ F+ER+VEEGYNP+YGA
Sbjct: 741 NRLDEIIVFRQLNREEVKDIAEIMLKEVFARIGDKGITLTVSNAFKERLVEEGYNPAYGA 800
Query: 634 RPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTV--LNGSSGAPESLAD 688
RPLRRA+MRLLEDS+AE++L IKEGDS VD+D D V V LN ++ LA+
Sbjct: 801 RPLRRAVMRLLEDSLAEEVLTGRIKEGDSAEVDIDHDKKVVVRHLNTTTPVTPQLAN 857
>gi|374249468|ref|YP_005088687.1| clpC gene product [Phaeocystis antarctica]
gi|340008159|gb|AEK26791.1| Clp protease ATP binding subunit [Phaeocystis antarctica]
Length = 830
Score = 983 bits (2541), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 482/678 (71%), Positives = 578/678 (85%), Gaps = 8/678 (1%)
Query: 2 VGESTEAVGAGVGGGSSGN--KMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 59
+GE+T+ V S+ N K PTL+E+GTNLT+ A +GKLDPVVGR+ +IERV+QILG
Sbjct: 142 LGENTK-----VNSDSNANRSKSPTLDEFGTNLTQKALDGKLDPVVGREKEIERVIQILG 196
Query: 60 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 119
RRTKNNP LIGEPGVGKTAIAEGLAQRIA+ DVPDT+EGK V+ LD+GLL+AGTKYRGEF
Sbjct: 197 RRTKNNPVLIGEPGVGKTAIAEGLAQRIANRDVPDTLEGKLVVALDIGLLIAGTKYRGEF 256
Query: 120 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 179
EERLK++MEE+ S EIIL IDEVHTLIGAGAAEGAIDAANILKP+L+RGELQCIGATT+
Sbjct: 257 EERLKRIMEEVSTSGEIILVIDEVHTLIGAGAAEGAIDAANILKPALSRGELQCIGATTI 316
Query: 180 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 239
+EYRKHIEKD ALERRFQPV V EPSVDETI+IL GLR+RYE HHKL +DEAL +AA+
Sbjct: 317 EEYRKHIEKDAALERRFQPVMVNEPSVDETIEILFGLRDRYERHHKLTISDEALTAAAKF 376
Query: 240 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 299
+ QYI+DRFLPDKAIDLIDEAGSRVRL +LP A++LE E R++ K K+ A+R QDFE
Sbjct: 377 ADQYIADRFLPDKAIDLIDEAGSRVRLMSFRLPAVAKQLEDEKRELLKSKDAAIRSQDFE 436
Query: 300 KAGELRDREMDLKAQISALVDKGKEM-SKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEK 358
AG+LR RE+++ AQI A++ K + A+ + P+VTE DI IVS+WTG+PV K
Sbjct: 437 LAGKLRLRELEINAQIQAVIWSAKGGDTPADQDQKVEAPIVTEEDIAQIVSSWTGVPVNK 496
Query: 359 VSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVG 418
++ ESD+LL MEETLH R+IGQDEAV A+S+AIRRARVGLKNPNRPIASFIF+GPTGVG
Sbjct: 497 LTRSESDKLLNMEETLHGRIIGQDEAVAAVSKAIRRARVGLKNPNRPIASFIFAGPTGVG 556
Query: 419 KSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRP 478
K+EL KALA+Y+FGSE+AM+RLDMSE+MERHTVSKLIGSPPGYVGY +GGQLTEAVRRRP
Sbjct: 557 KTELTKALASYFFGSEDAMVRLDMSEYMERHTVSKLIGSPPGYVGYDQGGQLTEAVRRRP 616
Query: 479 YTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR 538
YTVVLFDE+EKAH DVFN++LQI EDGRLTDS+GRT+DFK+TLLI+TSN+GS VIEKGG
Sbjct: 617 YTVVLFDEVEKAHQDVFNLLLQIFEDGRLTDSRGRTIDFKSTLLILTSNIGSKVIEKGGG 676
Query: 539 RIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIML 598
+GF+L DE + YNRI++LV EELKQYFRPEFLNRLDE+IVFRQLTK EV +I+++ML
Sbjct: 677 GLGFELSEDETEFQYNRIQALVNEELKQYFRPEFLNRLDEIIVFRQLTKNEVGQISELML 736
Query: 599 KEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIK 658
KEVF R+ K I+L+VTERFR +V+EGYNP+YGARPLRRAIMRLLED++AE++L+ +IK
Sbjct: 737 KEVFSRIAAKGIQLEVTERFRVHLVDEGYNPTYGARPLRRAIMRLLEDNLAEEVLSEKIK 796
Query: 659 EGDSVIVDVDSDGNVTVL 676
GD +VD+D D V +
Sbjct: 797 TGDIAVVDIDIDNKVKIF 814
>gi|148241887|ref|YP_001227044.1| ATP-dependent Clp protease ATP-binding subunit clpA-like protein
[Synechococcus sp. RCC307]
gi|147850197|emb|CAK27691.1| ATP-dependent Clp protease ATP-binding subunit clpA homolog
[Synechococcus sp. RCC307]
Length = 852
Score = 982 bits (2538), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 499/710 (70%), Positives = 595/710 (83%), Gaps = 25/710 (3%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
M+GE+ E A GGG K PTL+E+G+NLT+LA EGKLDPVVGR +I+RV+QILGR
Sbjct: 141 MLGETAEV--ATGGGGKGSTKTPTLDEFGSNLTQLASEGKLDPVVGRHNEIDRVIQILGR 198
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNP LIGEPGVGKTAIAEGLAQRI +G++PD +E K+V+TLD+GLLVAGTKYRGEFE
Sbjct: 199 RTKNNPVLIGEPGVGKTAIAEGLAQRIHAGEIPDILEDKRVLTLDIGLLVAGTKYRGEFE 258
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
ERLKK+M+EI+ + +IL IDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTLD
Sbjct: 259 ERLKKIMDEIRGAANVILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLD 318
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRKHIE+D ALERRFQPV V EPSV++TI+IL GLRERYE HH+L+ TD+A+V+AA L
Sbjct: 319 EYRKHIERDAALERRFQPVNVGEPSVEDTIEILMGLRERYEAHHRLKITDDAVVAAATLG 378
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
+YISDRFLPDKAIDLIDEAGSRVRL +++LP A+EL+K+LR++ K+K AVR QDF K
Sbjct: 379 DRYISDRFLPDKAIDLIDEAGSRVRLLNSKLPPAAKELDKQLREVQKDKETAVREQDFTK 438
Query: 301 AGELRDREMDLKAQISALVDKGKEMSKAETEAG---------------------DVGPVV 339
AGELR++E++L+ QI + ++ + +E D PVV
Sbjct: 439 AGELREKEVELREQIRGITQNRRDEASSEASESGSTSADATTPASTTATADTIQDNSPVV 498
Query: 340 TEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGL 399
E DI IV++WTG+PV+K++ ES +LL MEETLH+R+IGQDEAVKA+S+AIRRARVGL
Sbjct: 499 NEEDIAQIVASWTGVPVQKLTESESAKLLNMEETLHQRLIGQDEAVKAVSKAIRRARVGL 558
Query: 400 KNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPP 459
KNPNRPIASFIFSGPTGVGK+EL KALA+Y+FGSEEAMIRLDMSEFMERHTVSKLIGSPP
Sbjct: 559 KNPNRPIASFIFSGPTGVGKTELTKALASYFFGSEEAMIRLDMSEFMERHTVSKLIGSPP 618
Query: 460 GYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKN 519
GYVG+ EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFN++LQ+LEDGRLTDSKGRTVDFKN
Sbjct: 619 GYVGFNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNLLLQLLEDGRLTDSKGRTVDFKN 678
Query: 520 TLLIMTSNVGSSVIEKGGRRIGFDLDYDE-KDSSYNRIKSLVTEELKQYFRPEFLNRLDE 578
TL+IMTSN+GS VIEKGG +GF+ D+ +++ YNRI+SLV EELKQYFRPEFLNRLDE
Sbjct: 679 TLIIMTSNIGSKVIEKGGGGLGFEFSGDDAEETQYNRIRSLVNEELKQYFRPEFLNRLDE 738
Query: 579 MIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRR 638
+IVFRQL + EVK IADIML+EVF+R+K K I L VTE F+ER+VEEGYNP+YGARPLRR
Sbjct: 739 IIVFRQLNRDEVKLIADIMLREVFNRMKEKGILLSVTEAFKERLVEEGYNPAYGARPLRR 798
Query: 639 AIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTVL-NGSSGAPESLA 687
A+MRLLEDS+AE+ LA +KEG+S +VDVD D V + G++ AP+ LA
Sbjct: 799 AVMRLLEDSLAEEFLAGRLKEGESALVDVDDDKQVVIRPGGTTSAPQELA 848
>gi|456062009|ref|YP_007476253.1| Clp protease ATP binding subunit (chloroplast) [Pavlova lutheri]
gi|449327196|gb|AGE93752.1| Clp protease ATP binding subunit (chloroplast) [Pavlova lutheri]
Length = 845
Score = 979 bits (2532), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 480/680 (70%), Positives = 570/680 (83%), Gaps = 4/680 (0%)
Query: 2 VGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRR 61
+GE+ E G NK PTLEE+GT+LT+ AE G LDPV+GR+ +IERV+QILGRR
Sbjct: 143 LGETEEVFVGSNSQGQGRNKAPTLEEFGTDLTEKAEAGTLDPVIGREKEIERVIQILGRR 202
Query: 62 TKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEE 121
TKNNP LIGEPGVGKT+IAEGLAQRI + DVPD +E K V+TLD+GLLVAGTKYRGEFEE
Sbjct: 203 TKNNPILIGEPGVGKTSIAEGLAQRIIAKDVPDILEDKSVVTLDIGLLVAGTKYRGEFEE 262
Query: 122 RLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDE 181
RLKK+MEE++ + EIIL IDEVHTL+GAGAAEGAIDAANILKP+LARGELQCIGATTL+E
Sbjct: 263 RLKKIMEEVRVNSEIILVIDEVHTLVGAGAAEGAIDAANILKPALARGELQCIGATTLEE 322
Query: 182 YRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSY 241
YRKHIEKD ALERRFQPV V EPSVDETI+IL GLRERYE HHKL DEA+ +AA L+
Sbjct: 323 YRKHIEKDAALERRFQPVMVGEPSVDETIEILYGLRERYEKHHKLVIRDEAICAAATLAD 382
Query: 242 QYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKA 301
QYI+DRFLPDKAIDLIDE SRVRL ++ LP A++L+KELR+I KEK+EAVR QDFEKA
Sbjct: 383 QYIADRFLPDKAIDLIDEGSSRVRLLNSLLPPAAKQLDKELRKIIKEKDEAVRSQDFEKA 442
Query: 302 GELRDREMDLKAQISALVDKGK-EMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVS 360
GELR+RE++ K QI ALV + K E + G++ V+E +I IV++WTGIPV K+S
Sbjct: 443 GELRERELETKTQI-ALVGRNKGEGGRFAKNKGEL--FVSEDNIAEIVASWTGIPVNKLS 499
Query: 361 TDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 420
ES++L+ ME+TLH R+IGQ+EAV AISRAIRRARVGLKNPNRPIASFIFSGPTGVGK+
Sbjct: 500 KSESEKLMNMEKTLHGRIIGQNEAVVAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKT 559
Query: 421 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 480
EL KALA+Y+FGS E+M+RLDMSE+MERHTVSKLIGSPPGYVGY EGGQLTEAVRRRPY+
Sbjct: 560 ELTKALASYFFGSVESMVRLDMSEYMERHTVSKLIGSPPGYVGYNEGGQLTEAVRRRPYS 619
Query: 481 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI 540
VVLFDEIEKAHPDVFN++LQI EDGRLTDSKGRT+DFKNTLLI+TSN+GS VIEK G +
Sbjct: 620 VVLFDEIEKAHPDVFNLLLQIFEDGRLTDSKGRTIDFKNTLLILTSNIGSKVIEKSGGDL 679
Query: 541 GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 600
GF+ D+ +S YNRIK LV EELKQYFRPEFLNRLDE+IVFRQLTK +V +IADIML E
Sbjct: 680 GFEFSQDQSESEYNRIKVLVNEELKQYFRPEFLNRLDEIIVFRQLTKDQVGQIADIMLAE 739
Query: 601 VFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEG 660
VF+R+ K I +++T++F+E+V+ G+NPSYGARPLRRA+ L+ED +AE++L+ I G
Sbjct: 740 VFERISKKGISVEITDKFKEKVINSGFNPSYGARPLRRAVQSLIEDVLAEEVLSARIVSG 799
Query: 661 DSVIVDVDSDGNVTVLNGSS 680
DS+++D DG VL S
Sbjct: 800 DSIVIDAKDDGTSVVLKNDS 819
>gi|113955104|ref|YP_730239.1| Clp protease ATP-binding subunit ClpC [Synechococcus sp. CC9311]
gi|113882455|gb|ABI47413.1| putative Clp protease, ATP-binding subunit ClpC [Synechococcus sp.
CC9311]
Length = 860
Score = 978 bits (2529), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 498/710 (70%), Positives = 583/710 (82%), Gaps = 27/710 (3%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
M+GE+ E G GG K PTL+E+GTNLT+LA E KLDPVVGR +I+RV+QILGR
Sbjct: 141 MLGETAEVGAGGGGGSKGSTKTPTLDEFGTNLTQLATEAKLDPVVGRHKEIDRVIQILGR 200
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNP LIGEPGVGKTAIAEGLAQRI GD+PD +E K+V+TLD+GLLVAGTKYRGEFE
Sbjct: 201 RTKNNPVLIGEPGVGKTAIAEGLAQRIQQGDIPDILEEKRVLTLDIGLLVAGTKYRGEFE 260
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
ERLKK+MEEIK + +IL IDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTLD
Sbjct: 261 ERLKKIMEEIKSAGNVILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLD 320
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRKHIE+D ALERRFQPV V EPS+ +TI+IL+GLRERYE HH+L+ TD AL +AA L
Sbjct: 321 EYRKHIERDAALERRFQPVTVGEPSIADTIEILRGLRERYEQHHRLKITDAALDAAATLG 380
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
+YISDRFLPDKAIDLIDEAGSRVRL +++LP A+E++KELR + K+K +AVR QDF +
Sbjct: 381 DRYISDRFLPDKAIDLIDEAGSRVRLLNSKLPPAAKEVDKELRAVQKDKEDAVRDQDFSR 440
Query: 301 AGELRDREMDLKAQISALVDKGKEMSKAETEAGD-------------------------- 334
AGELRD+E++L+ +I L+ +E + A + D
Sbjct: 441 AGELRDKEVELREKIRTLLQSSREEAPANSGDADQTTDAAAGEAAASAAPEGSTAQPQLL 500
Query: 335 VGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRR 394
PVV E DI HIV++WTG+PV+K++ ES +LL MEETLHKR+IGQDEAVKA+S+AIRR
Sbjct: 501 TTPVVDEEDIAHIVASWTGVPVQKLTESESVKLLNMEETLHKRLIGQDEAVKAVSKAIRR 560
Query: 395 ARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKL 454
ARVGLKNPNRPIASFIFSGPTGVGK+EL KALAAY+FGSEEAMIRLDMSEFMERHTVSKL
Sbjct: 561 ARVGLKNPNRPIASFIFSGPTGVGKTELTKALAAYFFGSEEAMIRLDMSEFMERHTVSKL 620
Query: 455 IGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRT 514
IGSPPGYVG+ EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFN++LQ+LEDGRLTDSKGRT
Sbjct: 621 IGSPPGYVGFNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNLLLQLLEDGRLTDSKGRT 680
Query: 515 VDFKNTLLIMTSNVGSSVIEKGGRRIGFDLD-YDEKDSSYNRIKSLVTEELKQYFRPEFL 573
VDFKNTL+IMTSN+GS VIEKGG +GF+ + +++ YNRIKSLV EELKQYFRPEFL
Sbjct: 681 VDFKNTLIIMTSNIGSKVIEKGGGGLGFEFSGENAEENQYNRIKSLVNEELKQYFRPEFL 740
Query: 574 NRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGA 633
NRLDE+IVFRQL + EVK+IA+IMLKEVF R+ K I L V+ F+ER+VEEGYNP+YGA
Sbjct: 741 NRLDEIIVFRQLNREEVKDIAEIMLKEVFARIGDKGITLTVSNAFKERLVEEGYNPAYGA 800
Query: 634 RPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNGSSGAP 683
RPLRRA+MRLLEDS+AE++L IKEGDS VD+D D V V + + P
Sbjct: 801 RPLRRAVMRLLEDSLAEEVLTGRIKEGDSAEVDIDDDKKVVVRHLKTATP 850
>gi|427701534|ref|YP_007044756.1| chaperone ATPase [Cyanobium gracile PCC 6307]
gi|427344702|gb|AFY27415.1| ATPase with chaperone activity, ATP-binding subunit [Cyanobium
gracile PCC 6307]
Length = 849
Score = 976 bits (2523), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 491/683 (71%), Positives = 577/683 (84%), Gaps = 21/683 (3%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
M+GE+ E G GS+ K PTL+E+G+NLT+LA E KLDPVVGRQ +I+RV+QILGR
Sbjct: 141 MLGETAEVTSGSSGKGST--KTPTLDEFGSNLTQLAAESKLDPVVGRQNEIDRVIQILGR 198
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNP LIGEPGVGKTAIAEGLAQRI G++PD +E K+V+TLD+GLLVAGTKYRGEFE
Sbjct: 199 RTKNNPVLIGEPGVGKTAIAEGLAQRITQGEIPDILEDKRVLTLDIGLLVAGTKYRGEFE 258
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
ERLKK+MEEI+ + +IL IDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTLD
Sbjct: 259 ERLKKIMEEIRSAGNVILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLD 318
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRKHIE+D ALERRFQPV V EPSV +TI+ILKGLRERYE HH+L+ +DEALV+AA L
Sbjct: 319 EYRKHIERDAALERRFQPVMVGEPSVVDTIEILKGLRERYEQHHRLKISDEALVAAATLG 378
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
+YISDRFLPDKAIDLIDEAGSRVRL +++LP A+E++K+LR + KEK +AVR QDF K
Sbjct: 379 DRYISDRFLPDKAIDLIDEAGSRVRLLNSKLPPAAKEVDKQLRGVQKEKEDAVRQQDFTK 438
Query: 301 AGELRDREMDLKAQISALVDKGKEMSKA----ETE-----AGDVG---------PVVTEV 342
AGELRD+E++L+ QI ++ ++ A ET+ G V P+VTE
Sbjct: 439 AGELRDKEVELRDQIRTILQARRDDEPAGNSGETDTPALLGGPVADDASEESRSPLVTEE 498
Query: 343 DIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNP 402
DI IV++WTG+PV+K++ ES +LL MEETLH+R+IGQDEAVKA+SRAIRRARVGLKNP
Sbjct: 499 DIAQIVASWTGVPVQKLTESESVKLLNMEETLHQRLIGQDEAVKAVSRAIRRARVGLKNP 558
Query: 403 NRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYV 462
NRPIASFIFSGPTGVGK+EL KALAAY+FGSE+AMIRLDMSEFMERHTVSKLIGSPPGYV
Sbjct: 559 NRPIASFIFSGPTGVGKTELTKALAAYFFGSEDAMIRLDMSEFMERHTVSKLIGSPPGYV 618
Query: 463 GYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLL 522
G+ EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFN++LQ+LEDGRLTDSKGRTVDFKNTL+
Sbjct: 619 GFNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNLLLQLLEDGRLTDSKGRTVDFKNTLI 678
Query: 523 IMTSNVGSSVIEK-GGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIV 581
IMTSN+GS VIEK GG D +++ YNRI+SLV EELKQYFRPEFLNRLDE+IV
Sbjct: 679 IMTSNIGSKVIEKGGGGLGFEFGGGDVEETQYNRIRSLVNEELKQYFRPEFLNRLDEIIV 738
Query: 582 FRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIM 641
FRQLT+ EVK IA+IML+EVF R++ K I + VTE F+ER+VEEGYNPSYGARPLRRA+M
Sbjct: 739 FRQLTRDEVKLIAEIMLREVFARMQDKGIGMSVTEAFKERLVEEGYNPSYGARPLRRAVM 798
Query: 642 RLLEDSMAEKMLAREIKEGDSVI 664
RLLEDS+AE+ L+ I EGD+ +
Sbjct: 799 RLLEDSLAEEFLSGRIGEGDACL 821
>gi|116073045|ref|ZP_01470307.1| ATPase [Synechococcus sp. RS9916]
gi|116068350|gb|EAU74102.1| ATPase [Synechococcus sp. RS9916]
Length = 859
Score = 976 bits (2522), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 481/663 (72%), Positives = 565/663 (85%), Gaps = 25/663 (3%)
Query: 20 NKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAI 79
K PTL+E+G+NLT+LA EGKLDPVVGRQ +I+RV+QILGRRTKNNP LIGEPGVGKTAI
Sbjct: 161 TKTPTLDEFGSNLTQLAGEGKLDPVVGRQHEIDRVIQILGRRTKNNPVLIGEPGVGKTAI 220
Query: 80 AEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILF 139
AEGLAQRI +GD+PD +E K+V+TLD+GLLVAGTKYRGEFEERLKK+MEEIK + +IL
Sbjct: 221 AEGLAQRIQTGDIPDILEDKRVLTLDIGLLVAGTKYRGEFEERLKKIMEEIKAAGNVILV 280
Query: 140 IDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPV 199
IDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTLDEYRKHIE+D ALERRFQPV
Sbjct: 281 IDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIERDAALERRFQPV 340
Query: 200 KVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDE 259
V EPS+ +TI+IL+GLRERYE HH+L+ TDEAL +AA L +YISDRFLPDKAIDLIDE
Sbjct: 341 NVGEPSIPDTIEILRGLRERYEQHHRLKITDEALEAAATLGDRYISDRFLPDKAIDLIDE 400
Query: 260 AGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALV 319
AGSRVRL +++LP A+E++KELR + KEK EAVR QDF KAGELRD+E++L+ QI +L+
Sbjct: 401 AGSRVRLLNSKLPPAAKEVDKELRSVQKEKEEAVREQDFTKAGELRDKEVELREQIRSLL 460
Query: 320 DKGKE--------------------MSKAETEAGDVG----PVVTEVDIQHIVSAWTGIP 355
++ A+ +G+ PVV E DI IV++WTG+P
Sbjct: 461 QNSRDGLEAPAADADSAPAGESTVTSVSADAPSGESATLTTPVVDEEDIAQIVASWTGVP 520
Query: 356 VEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPT 415
V+K++ ES +LL MEETLHKR+IGQDEAVKA+S+AIRRARVGLKNPNRPIASFIFSGPT
Sbjct: 521 VQKLTESESVKLLNMEETLHKRLIGQDEAVKAVSKAIRRARVGLKNPNRPIASFIFSGPT 580
Query: 416 GVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVR 475
GVGK+EL KALA Y+FGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVG+ EGGQLTEAVR
Sbjct: 581 GVGKTELTKALATYFFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGFNEGGQLTEAVR 640
Query: 476 RRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEK 535
RRPYTVVLFDEIEKAHPDVFN++LQ+LEDGRLTDSKGRTVDFKNTL+IMTSN+GS VIEK
Sbjct: 641 RRPYTVVLFDEIEKAHPDVFNLLLQLLEDGRLTDSKGRTVDFKNTLVIMTSNIGSKVIEK 700
Query: 536 GGRRIGFDLD-YDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIA 594
GG +GF+ + +++ YNRI+SLV EELKQYFRPEFLNRLDE+IVFRQL + EVK+IA
Sbjct: 701 GGGGLGFEFSGENAEENQYNRIRSLVNEELKQYFRPEFLNRLDEIIVFRQLNRDEVKQIA 760
Query: 595 DIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLA 654
DIML+EVF R+ K I L V+E F+ER+VEEG+NP+YGARPLRRA+MRLLEDS+AE++L+
Sbjct: 761 DIMLREVFSRIGEKGITLTVSEAFKERLVEEGFNPAYGARPLRRAVMRLLEDSLAEEVLS 820
Query: 655 REI 657
I
Sbjct: 821 GRI 823
>gi|428319462|ref|YP_007117344.1| ATPase AAA-2 domain protein [Oscillatoria nigro-viridis PCC 7112]
gi|428243142|gb|AFZ08928.1| ATPase AAA-2 domain protein [Oscillatoria nigro-viridis PCC 7112]
Length = 822
Score = 971 bits (2509), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 476/684 (69%), Positives = 571/684 (83%), Gaps = 12/684 (1%)
Query: 2 VGESTEAVGAGVGGGSSGN-KMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
VGE G G G SG+ K+PTLEE+GTNLTKLA GKLDPVVGR+ +IERV+Q+LGR
Sbjct: 142 VGEVAAVPG---GRGDSGDRKIPTLEEFGTNLTKLAAAGKLDPVVGRENEIERVIQVLGR 198
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNP L+GEPGVGKTA+AEGLAQRI + +VP+ +E K+VI+LDMG L+AGTK+RGEFE
Sbjct: 199 RTKNNPVLVGEPGVGKTALAEGLAQRIVNRNVPEILEDKQVISLDMGSLIAGTKFRGEFE 258
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
ERL K+M EI+ + IIL IDE+HTL+GAGA +G++DA+N+LKP+LARGELQC+GATTLD
Sbjct: 259 ERLAKIMAEIRAAGNIILVIDEIHTLVGAGAIQGSMDASNMLKPALARGELQCVGATTLD 318
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRKHIE+D ALERRFQP+KV EPSV ETI+IL GLR YE HH+L +D AL +AA LS
Sbjct: 319 EYRKHIERDAALERRFQPIKVGEPSVAETIEILYGLRSAYEQHHRLTISDAALEAAATLS 378
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
+YI+DRFLPDKAIDLIDEAGSRVR+ ++Q P E +EL+K+L +TKEK+ AVR QDF+K
Sbjct: 379 DRYINDRFLPDKAIDLIDEAGSRVRVMNSQTPPEVKELKKQLPAVTKEKDAAVREQDFDK 438
Query: 301 AGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVS 360
AG+LRDRE++++A+I+A ++ + P VTE DI HIV+ WTG+PV K++
Sbjct: 439 AGKLRDRELEIEAEIAAATINKSQLKTS--------PTVTEEDIAHIVANWTGVPVSKLT 490
Query: 361 TDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 420
ES+ LL ME+TLH+R+IGQ+EAV A+SRAIRRARVGLKNPNRPIASFIFSGPTGVGK+
Sbjct: 491 ESESELLLHMEDTLHQRLIGQEEAVTAVSRAIRRARVGLKNPNRPIASFIFSGPTGVGKT 550
Query: 421 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 480
EL KALA Y+FGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGY EGGQLTEAVRRRPYT
Sbjct: 551 ELTKALATYFFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYDEGGQLTEAVRRRPYT 610
Query: 481 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI 540
VVLFDEIEKAHPDVFNMMLQILEDGRLTD+KGRTVDFKNTLLIMTSN+GS VIEKGG +
Sbjct: 611 VVLFDEIEKAHPDVFNMMLQILEDGRLTDAKGRTVDFKNTLLIMTSNIGSRVIEKGGGGL 670
Query: 541 GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 600
GF+ D YNR++SLV EELKQ+FRPEF+NRLDE+IVFRQL + EVK+IADIML++
Sbjct: 671 GFEFAESAADGQYNRVRSLVNEELKQFFRPEFINRLDEIIVFRQLNREEVKQIADIMLQQ 730
Query: 601 VFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEG 660
VF RL + I L VTERF++ +V EGYNPSYGARPLRRAIMRLLED +AE+ML+ ++K+G
Sbjct: 731 VFSRLTEQGITLSVTERFKDLLVTEGYNPSYGARPLRRAIMRLLEDVLAEEMLSGKLKDG 790
Query: 661 DSVIVDVDSDGNVTVLNGSSGAPE 684
IVDVD +G V ++ P+
Sbjct: 791 QKAIVDVDENGQVKIVPDGPSEPK 814
>gi|354564772|ref|ZP_08983948.1| ATPase AAA-2 domain protein [Fischerella sp. JSC-11]
gi|353549898|gb|EHC19337.1| ATPase AAA-2 domain protein [Fischerella sp. JSC-11]
Length = 820
Score = 966 bits (2497), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 473/676 (69%), Positives = 568/676 (84%), Gaps = 11/676 (1%)
Query: 1 MVGESTEAVGAGVGGGS-SGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 59
++GE T G G S + TLEE+G NLTKLA+EGKLDPVVGR+ +IER +QILG
Sbjct: 141 LLGEVTPMTVGGSGSSSPRRTQTLTLEEFGRNLTKLAQEGKLDPVVGREKEIERAIQILG 200
Query: 60 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 119
RRTKNNP LIGEPGVGKTAIAEGLAQRI + DVPD ++ K+VI+LDMGLLVAGT++RG+F
Sbjct: 201 RRTKNNPVLIGEPGVGKTAIAEGLAQRIHNQDVPDILQDKQVISLDMGLLVAGTRFRGDF 260
Query: 120 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 179
EERLKK+M+EI+ IIL IDE+HTL+GAG EG +DAANILKP+LA+GELQCIGATTL
Sbjct: 261 EERLKKIMDEIRSERNIILVIDEIHTLVGAGGVEGGMDAANILKPALAKGELQCIGATTL 320
Query: 180 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 239
DEYR+HIE+D ALERRFQP+ V EPSV++TI IL+GLR YE HH++ TD+ALV+AA L
Sbjct: 321 DEYRQHIERDAALERRFQPIMVGEPSVEDTIVILQGLRSVYEQHHRVEITDQALVAAANL 380
Query: 240 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 299
S +YISDRFLPDKAIDLIDEAGSRVRLR + + RE+++EL +TK K+EAVR QDF+
Sbjct: 381 SDRYISDRFLPDKAIDLIDEAGSRVRLRSSMVAAN-REIKRELATVTKNKDEAVRAQDFD 439
Query: 300 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 359
KA ELRDRE++L+AQ++ K +++ VV E DI IV+AWTG+PV K+
Sbjct: 440 KAAELRDRELELEAQLADTTQSDKSVNRL---------VVNEEDIAQIVAAWTGVPVNKL 490
Query: 360 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 419
+ ES+ LL +E+TLH+R+IGQ++AV A+SRAIRRARVGLKNPNRPIASF+FSGPTGVGK
Sbjct: 491 TESESEMLLHLEDTLHQRLIGQEQAVTAVSRAIRRARVGLKNPNRPIASFVFSGPTGVGK 550
Query: 420 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 479
+ELAK+LAAY+FGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGY EGGQLTEAVRRRPY
Sbjct: 551 TELAKSLAAYFFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYDEGGQLTEAVRRRPY 610
Query: 480 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 539
TV+LFDEIEKAHPDVFNM+LQIL+DG LTD+KGR VDFKNTL+I+TSN+GS VIEKGG
Sbjct: 611 TVLLFDEIEKAHPDVFNMLLQILDDGHLTDAKGRKVDFKNTLIILTSNIGSRVIEKGGGG 670
Query: 540 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 599
+GF DE ++SYNRI++LV EE+K YFRPEFLNRLDE+IVF QL K EVK+IA+IMLK
Sbjct: 671 LGFQFSEDEAEASYNRIRNLVNEEMKNYFRPEFLNRLDEIIVFTQLKKEEVKQIAEIMLK 730
Query: 600 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 659
EV DRL K I L+V++RF+ERV++EGYNPSYGARPLRRAIMRLLEDS+AE +L+ +I +
Sbjct: 731 EVADRLTEKGITLEVSDRFKERVLQEGYNPSYGARPLRRAIMRLLEDSLAEALLSGQITD 790
Query: 660 GDSVIVDVDSDGNVTV 675
GD+ IVDVD DG V V
Sbjct: 791 GDTAIVDVDDDGQVRV 806
>gi|434395188|ref|YP_007130135.1| ATPase AAA-2 domain protein [Gloeocapsa sp. PCC 7428]
gi|428267029|gb|AFZ32975.1| ATPase AAA-2 domain protein [Gloeocapsa sp. PCC 7428]
Length = 822
Score = 963 bits (2489), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 469/661 (70%), Positives = 563/661 (85%), Gaps = 11/661 (1%)
Query: 16 GSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVG 75
G + +K TL+E+ TNLTKLA EGKLDPVVGR+ +IER +QILGRRTKNNP LIGEPGVG
Sbjct: 158 GRTASKTATLDEFSTNLTKLAAEGKLDPVVGREKEIERAIQILGRRTKNNPVLIGEPGVG 217
Query: 76 KTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDE 135
KTAIAEGLAQRI + +VPD +E ++V++LDMGLL+AGT++RG+FEER+K +MEEI+ +
Sbjct: 218 KTAIAEGLAQRIVNQNVPDILEDRQVVSLDMGLLIAGTRFRGDFEERIKAIMEEIRAAGN 277
Query: 136 IILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERR 195
IIL IDE+HTLIG G EG +DAANILKP+LARGELQC+GATTLDEYRKHIE+D ALERR
Sbjct: 278 IILVIDEIHTLIGTGGVEGGMDAANILKPALARGELQCLGATTLDEYRKHIERDAALERR 337
Query: 196 FQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAID 255
FQP+ V EPSVDETI+IL GLR YE HH+++ TD AL +AA+LS +YISDRFLPDKAID
Sbjct: 338 FQPIMVGEPSVDETIEILHGLRATYEQHHRVKITDVALEAAAKLSDRYISDRFLPDKAID 397
Query: 256 LIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQI 315
LIDEAGSRVRLR++Q E+++EL Q+++ K AVR QDF+KAG+LRDRE++L+AQI
Sbjct: 398 LIDEAGSRVRLRNSQ-ASVTSEVKRELVQVSRAKEAAVRAQDFDKAGQLRDRELELEAQI 456
Query: 316 SALVDKGKEMSKAETEAGDVG-PVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETL 374
A+ AE + DV PVV E DI IV++WTG+PV K++ ES+ LL +E+TL
Sbjct: 457 KAI---------AENQNKDVNTPVVDEEDIAQIVASWTGVPVNKLTETESELLLHLEDTL 507
Query: 375 HKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSE 434
H+R+IGQ EAV A+SRAIRRARVGLK+P+RPIASFIFSGPTGVGK+EL KALA+Y+FGSE
Sbjct: 508 HQRIIGQQEAVTAVSRAIRRARVGLKSPDRPIASFIFSGPTGVGKTELTKALASYFFGSE 567
Query: 435 EAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDV 494
EAMIRLDMSEFMERHTVSKLIGSPPGYVGY EGGQLTEAVRRRPYTVVLFDEIEKAHPDV
Sbjct: 568 EAMIRLDMSEFMERHTVSKLIGSPPGYVGYDEGGQLTEAVRRRPYTVVLFDEIEKAHPDV 627
Query: 495 FNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYN 554
FNMMLQI++DGRLTD+KGRTVDFKNTLLIMTSN+GS VIEKGG IGF++ + +SSYN
Sbjct: 628 FNMMLQIMDDGRLTDAKGRTVDFKNTLLIMTSNIGSRVIEKGGGGIGFEIADSQSESSYN 687
Query: 555 RIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQV 614
I++LV E+LKQ+FRPEFLNR+D++IVFRQL+K EV +IADI+L+EV RL + IEL+V
Sbjct: 688 HIRNLVNEDLKQHFRPEFLNRVDDIIVFRQLSKAEVTQIADILLREVSTRLVEQGIELEV 747
Query: 615 TERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVT 674
T +F++RVV+EGYNPSYGARPLRRAIMRLLEDS+AE MLA IK GD+ IVD+D G V
Sbjct: 748 TAKFKDRVVQEGYNPSYGARPLRRAIMRLLEDSLAEAMLAGSIKVGDTAIVDIDDRGEVK 807
Query: 675 V 675
V
Sbjct: 808 V 808
>gi|283794929|ref|YP_003359282.1| Clp protease ATP binding subunit [Cryptomonas paramecium]
gi|253981901|gb|ACT46818.1| Clp protease ATP binding subunit [Cryptomonas paramecium]
Length = 817
Score = 958 bits (2477), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 459/677 (67%), Positives = 573/677 (84%), Gaps = 12/677 (1%)
Query: 13 VGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEP 72
+GG S ++PTL+EYGT+LT+ A +GKLDPV+GR +IERV+QILGRR+KNNP LIGEP
Sbjct: 150 IGGAQSRGRIPTLDEYGTDLTQKAADGKLDPVIGRFKEIERVIQILGRRSKNNPILIGEP 209
Query: 73 GVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQ 132
GVGKTA+AEGLAQRI DVPD +E KKV+TLD+GLLVAGTKYRGEFEERLK++++EIK
Sbjct: 210 GVGKTAVAEGLAQRIVYKDVPDILEDKKVVTLDIGLLVAGTKYRGEFEERLKRVIDEIKA 269
Query: 133 SDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPAL 192
++ +IL IDEVHTLIGAGAAEGAIDAANILKP+LARGE+QCIGATTL+E+RKHIEKDPAL
Sbjct: 270 TNNVILVIDEVHTLIGAGAAEGAIDAANILKPALARGEMQCIGATTLEEFRKHIEKDPAL 329
Query: 193 ERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDK 252
ERRFQPV V EPSV +T++IL GLR++YE HHKL +DEA+ +AA + QYI+DRFLPDK
Sbjct: 330 ERRFQPVIVNEPSVTQTVEILFGLRDKYEKHHKLVISDEAISAAATFADQYIADRFLPDK 389
Query: 253 AIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLK 312
AIDL+DEAGSRVRL H+Q+P A+EL+KELR+I +K++ VR +DF A LRDRE +++
Sbjct: 390 AIDLLDEAGSRVRLLHSQIPPAAKELDKELREILTQKDDFVRMEDFHSAANLRDRETEIR 449
Query: 313 AQISALV--DKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKM 370
AQ++A++ +KG+ + E VVTE DI IV++WTGIPV+K++ E+++LL+M
Sbjct: 450 AQMAAVIQANKGEWVPAPEIS------VVTEEDIAQIVASWTGIPVQKMTRTETEKLLQM 503
Query: 371 EETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYY 430
EETLH R+IGQDEAV A+++AI+RARVG+KNPNRPIASFIFSGPTGVGK+EL KALA+Y+
Sbjct: 504 EETLHSRIIGQDEAVTAVAKAIKRARVGMKNPNRPIASFIFSGPTGVGKTELTKALASYF 563
Query: 431 FGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKA 490
FGSEEAM+RLDMSE+ME+HT SKLIGSPPGY+GY+EGGQLTEAVRRRPYTVVLFDEIEK
Sbjct: 564 FGSEEAMVRLDMSEYMEKHTTSKLIGSPPGYIGYSEGGQLTEAVRRRPYTVVLFDEIEKG 623
Query: 491 HPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDE-K 549
HPD+FN++LQILEDGRLTDSKGRT+DFKNTLLI+TSNVGS ++K G D+ E +
Sbjct: 624 HPDIFNLLLQILEDGRLTDSKGRTIDFKNTLLILTSNVGSKSVQKMN---GLGFDHKETR 680
Query: 550 DSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKD 609
++ Y ++K+LV +ELK+YFRPEFLNRLDE+IVFRQLTK EV IADIMLKEVF+R+ K
Sbjct: 681 EAYYAKVKTLVNDELKEYFRPEFLNRLDEIIVFRQLTKNEVGRIADIMLKEVFNRISAKG 740
Query: 610 IELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDS 669
I+L+VT RF++ ++ EGYNP YGARPLRRA+MRLLED+++E+ LA ++KEGD+ I+D D
Sbjct: 741 IQLKVTSRFKDHLINEGYNPVYGARPLRRAVMRLLEDTLSEEYLAGKVKEGDTAIMDTDR 800
Query: 670 DGNVTVLNGSSGAPESL 686
G V VL G +L
Sbjct: 801 HGKVHVLTTGKGKTAAL 817
>gi|113476893|ref|YP_722954.1| ATPase [Trichodesmium erythraeum IMS101]
gi|110167941|gb|ABG52481.1| ATPase AAA-2 [Trichodesmium erythraeum IMS101]
Length = 825
Score = 958 bits (2476), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 462/669 (69%), Positives = 576/669 (86%), Gaps = 8/669 (1%)
Query: 9 VGAGVGGGS--SGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNP 66
V A GGS SG K TLEE+GT+LTKLA EGK+DP+VGR+ +IERV+Q+LGRRTKNNP
Sbjct: 145 VAAVAPGGSTPSGKKAVTLEEFGTDLTKLAAEGKIDPIVGRKTEIERVIQVLGRRTKNNP 204
Query: 67 CLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKL 126
LIGEPGVGKTA+AEGLAQRI + DVPD +E K+V++L++G L+AGT++RGEFEERLKK+
Sbjct: 205 VLIGEPGVGKTALAEGLAQRIINQDVPDILENKQVVSLNIGSLIAGTRFRGEFEERLKKI 264
Query: 127 MEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHI 186
M+EI+ + IIL IDE+HT++GAGA EG++DAANILKP+LARGELQCIGATTLDEYRKHI
Sbjct: 265 MDEIRANGNIILVIDEIHTVVGAGAIEGSMDAANILKPALARGELQCIGATTLDEYRKHI 324
Query: 187 EKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISD 246
E+D ALERRFQPVKV EPSV++TI+IL G+R YE HH+L +DEAL +AAQLS +YISD
Sbjct: 325 ERDAALERRFQPVKVGEPSVEQTIEILYGVRSAYEQHHRLTISDEALRAAAQLSDRYISD 384
Query: 247 RFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRD 306
RFLPDKAIDLIDEAGSRVR++++ + + REL +EL ++ K+K E VR QDFEKA +LRD
Sbjct: 385 RFLPDKAIDLIDEAGSRVRVKNSMVSPQLRELRRELSRVIKDKEETVRQQDFEKASQLRD 444
Query: 307 REMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDR 366
RE+ ++A+I ++ +++ PVVTE DI IV++WTG+PV K++ ES++
Sbjct: 445 RELGIQAEIEETTSNKQDKKNSKS------PVVTEDDIADIVASWTGVPVSKLTESESEK 498
Query: 367 LLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKAL 426
LL +E+TLH+R+IGQ++AVKA+SRA+RRARVGLKNP RPIASFIFSGPTGVGK+EL KAL
Sbjct: 499 LLHIEDTLHQRLIGQEDAVKAVSRALRRARVGLKNPKRPIASFIFSGPTGVGKTELTKAL 558
Query: 427 AAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDE 486
AAY+FGSEEAMIRLDMSE+MERHTVSKL+GSPPG+VGY EGGQLTEAVRRRPYTVVLFDE
Sbjct: 559 AAYFFGSEEAMIRLDMSEYMERHTVSKLVGSPPGFVGYDEGGQLTEAVRRRPYTVVLFDE 618
Query: 487 IEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDY 546
IEKAHPDVFN+MLQ+LEDGRLTDSKGR VDFKNTL+IMTSN+GS VIEKGG +GF+
Sbjct: 619 IEKAHPDVFNIMLQVLEDGRLTDSKGRVVDFKNTLIIMTSNIGSQVIEKGGGGLGFEFAE 678
Query: 547 DEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLK 606
D++++ YNRI++LV EELKQYFRPEFLNRLDE+IVFRQLTK EVKEIA+IML+EVF RL
Sbjct: 679 DKEEAQYNRIRNLVNEELKQYFRPEFLNRLDEIIVFRQLTKDEVKEIAEIMLREVFSRLG 738
Query: 607 TKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVD 666
++I L V+++F++R++E+G++PSYGARPLRRAIMRLLED +AE +LA +I++G++V VD
Sbjct: 739 DREITLTVSDKFKDRLIEDGFDPSYGARPLRRAIMRLLEDVLAEALLAGKIQDGENVYVD 798
Query: 667 VDSDGNVTV 675
+D + V V
Sbjct: 799 LDENREVKV 807
>gi|428309817|ref|YP_007120794.1| chaperone ATPase [Microcoleus sp. PCC 7113]
gi|428251429|gb|AFZ17388.1| ATPase with chaperone activity, ATP-binding subunit [Microcoleus
sp. PCC 7113]
Length = 827
Score = 957 bits (2474), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/659 (69%), Positives = 568/659 (86%), Gaps = 1/659 (0%)
Query: 20 NKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAI 79
K PTL+E GTNLT+LA +GKLDPVVGR+ ++ER++QIL RRTKNNP LIGEPGVGKTA+
Sbjct: 157 TKTPTLDECGTNLTQLAAQGKLDPVVGRRKEVERMIQILVRRTKNNPILIGEPGVGKTAL 216
Query: 80 AEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILF 139
AEGLAQRI + DVP +++GK+V+TLD G L+AGTKYRGEFEERLKK++EEI+ IIL
Sbjct: 217 AEGLAQRIINNDVPISLQGKQVLTLDTGSLLAGTKYRGEFEERLKKIIEEIRSCQNIILM 276
Query: 140 IDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPV 199
+DEVHTL+GAGA G++DAANILKP+LARGE+QCIGATTLDEYRK+IE+D ALERRFQPV
Sbjct: 277 VDEVHTLVGAGAVSGSLDAANILKPALARGEIQCIGATTLDEYRKYIERDAALERRFQPV 336
Query: 200 KVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDE 259
V EPSV+ETI+IL GLR+RYE HH+++ +D AL +AA+LS +YISDRFLPDKAIDLIDE
Sbjct: 337 MVDEPSVEETIEILYGLRDRYEQHHQIKISDLALEAAAKLSDRYISDRFLPDKAIDLIDE 396
Query: 260 AGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALV 319
AGSRVR+ ++++P A+ L+KELRQ+ K+K +A+ Q+F KAG++R +E+ ++A+I AL+
Sbjct: 397 AGSRVRILNSKVPSSAKSLKKELRQVLKDKGDAIGLQEFSKAGQMRAQEIRIQAEIRALI 456
Query: 320 DKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVI 379
+ + + ++ + D P+V + DI HIV++WTGIPV K++ ES +LL+ME+ LH+R++
Sbjct: 457 -QNEPSNVSDADEVDYAPIVNQEDIAHIVASWTGIPVNKLTESESSKLLQMEDILHQRLV 515
Query: 380 GQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIR 439
GQ+EAVKAISRAIRRARVG+ NPNRPIASFIFSGPTGVGK+ELAK+LAAY+FGSE AMIR
Sbjct: 516 GQEEAVKAISRAIRRARVGISNPNRPIASFIFSGPTGVGKTELAKSLAAYFFGSESAMIR 575
Query: 440 LDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMML 499
LDMSE+MERHTVSKLIGSPPGYVG+ EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFN++L
Sbjct: 576 LDMSEYMERHTVSKLIGSPPGYVGFNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNLLL 635
Query: 500 QILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSL 559
QILEDGRL+D+KGRTVDF+NTLLIMTSN+GS VIEKGG +GFD ++ D+ Y I SL
Sbjct: 636 QILEDGRLSDTKGRTVDFRNTLLIMTSNIGSKVIEKGGGGLGFDWSENQADAQYRGISSL 695
Query: 560 VTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFR 619
V EELK YFRPEFLNRLDE+IVFRQL+K EVK+IA I+L EVF RLK + I L+VTERF+
Sbjct: 696 VNEELKAYFRPEFLNRLDEIIVFRQLSKNEVKQIASILLNEVFSRLKEQGITLEVTERFK 755
Query: 620 ERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNG 678
+R+VEEGY+PSYGARPLRRAI RLLED +AE++L+ ++E D+V+VD+D G + VL G
Sbjct: 756 DRLVEEGYDPSYGARPLRRAITRLLEDCLAEEILSGRLQEADTVVVDIDDQGQIKVLQG 814
>gi|334117325|ref|ZP_08491417.1| ATPase AAA-2 domain protein [Microcoleus vaginatus FGP-2]
gi|333462145|gb|EGK90750.1| ATPase AAA-2 domain protein [Microcoleus vaginatus FGP-2]
Length = 822
Score = 956 bits (2472), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 474/684 (69%), Positives = 570/684 (83%), Gaps = 12/684 (1%)
Query: 2 VGESTEAVGAGVGGGSSGN-KMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
VGE G G G SG+ K PTLEE+GTNLTKLA GKLDPVVGR+ +IERV+Q+LGR
Sbjct: 142 VGEVAAVPG---GRGESGDRKTPTLEEFGTNLTKLAAAGKLDPVVGRENEIERVIQVLGR 198
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNP L+GEPGVGKTA+AEGLAQRI + +VP+ +E K+VI+LDMG L+AGTK+RGEFE
Sbjct: 199 RTKNNPVLVGEPGVGKTALAEGLAQRIVNRNVPEILEDKQVISLDMGSLIAGTKFRGEFE 258
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
ERL K+M EI+ + IIL IDE+HTL+GAGA +G++DA+N+LKP+LARGELQC+GATTL+
Sbjct: 259 ERLTKIMAEIRAAGNIILVIDEIHTLVGAGAIQGSMDASNMLKPALARGELQCVGATTLE 318
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRKHIE+D ALERRFQP+KV EPSV ETI+IL GLR YE HH+L +D AL +AA LS
Sbjct: 319 EYRKHIERDAALERRFQPIKVGEPSVAETIEILYGLRSAYEQHHRLTISDAALEAAATLS 378
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
+YI+DRFLPDKAIDLIDEAGSRVR+ ++Q P E +EL+K+L +TKEK+ AVR QDF+K
Sbjct: 379 DRYINDRFLPDKAIDLIDEAGSRVRVMNSQTPPEVKELKKQLPAVTKEKDAAVREQDFDK 438
Query: 301 AGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVS 360
AG+LRDRE++++A+I+ ++ + P+VTE DI HIV+ WTG+PV K++
Sbjct: 439 AGKLRDRELEIEAEIAEATINKSQLKTS--------PIVTEEDIAHIVANWTGVPVSKLT 490
Query: 361 TDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 420
ES+ LL ME+TLH+R+IGQ+EAV A+SRAIRRARVGLKNPNRPIASFIFSGPTGVGK+
Sbjct: 491 ESESELLLHMEDTLHQRLIGQEEAVSAVSRAIRRARVGLKNPNRPIASFIFSGPTGVGKT 550
Query: 421 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 480
EL KALA Y+FGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGY EGGQLTEAVRRRPYT
Sbjct: 551 ELTKALATYFFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYDEGGQLTEAVRRRPYT 610
Query: 481 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI 540
V+LFDEIEKAHPDVFNMMLQILEDGRLTD+KGRTVDFKNTLLIMTSN+GS VIEKGG +
Sbjct: 611 VILFDEIEKAHPDVFNMMLQILEDGRLTDAKGRTVDFKNTLLIMTSNIGSRVIEKGGGGL 670
Query: 541 GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 600
GF+ D YNR++SLV EELKQ FRPEF+NRLDE+IVFRQL + EVK+IADIML++
Sbjct: 671 GFEFAESAADGQYNRVRSLVNEELKQVFRPEFINRLDEIIVFRQLNREEVKQIADIMLQQ 730
Query: 601 VFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEG 660
VF RL + I L VT+RF++ +V EGYNPSYGARPLRRAIMRLLED +AE+ML+ ++K+G
Sbjct: 731 VFSRLTEQGITLSVTDRFKDLLVTEGYNPSYGARPLRRAIMRLLEDVLAEEMLSGKLKDG 790
Query: 661 DSVIVDVDSDGNVTVLNGSSGAPE 684
IVDVD +G V V+ S P+
Sbjct: 791 QKAIVDVDENGQVKVVPDGSSEPK 814
>gi|427740130|ref|YP_007059674.1| chaperone ATPase [Rivularia sp. PCC 7116]
gi|427375171|gb|AFY59127.1| ATPase with chaperone activity, ATP-binding subunit [Rivularia sp.
PCC 7116]
Length = 852
Score = 955 bits (2469), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 460/657 (70%), Positives = 565/657 (85%), Gaps = 12/657 (1%)
Query: 20 NKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAI 79
N+M TLEE+G NLTKLA EGKLDPVVGR+ +IER VQ+LGRRTKNNP LIGEPGVGKTAI
Sbjct: 195 NQMATLEEFGRNLTKLAAEGKLDPVVGREKEIERTVQVLGRRTKNNPVLIGEPGVGKTAI 254
Query: 80 AEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILF 139
AEGLAQRI + DVPD ++ K+VI+LDMGL+VAGT++RG+FEERLKK+MEEI+ + I+L
Sbjct: 255 AEGLAQRIFNNDVPDILQEKQVISLDMGLVVAGTRFRGDFEERLKKIMEEIRSAGNIVLV 314
Query: 140 IDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPV 199
IDE+HTL+GAG EG +DAANILKP+LARGELQCIGATTLDEYRKHIE+D ALERRFQP+
Sbjct: 315 IDEIHTLVGAGGMEGGMDAANILKPALARGELQCIGATTLDEYRKHIERDAALERRFQPI 374
Query: 200 KVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDE 259
K+ EPSVDETI+IL+GLR YE HH L +DEALV+A+QLS +YI DRFLPDKAIDLIDE
Sbjct: 375 KIGEPSVDETIEILQGLRGAYEQHHNLTISDEALVAASQLSDRYIQDRFLPDKAIDLIDE 434
Query: 260 AGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALV 319
AGSRVRLRH+ + R+L++++ + KEKNEAV+ QDF+KA ELRD+EM+L+ Q+
Sbjct: 435 AGSRVRLRHS-MASNDRDLKRQITAVAKEKNEAVKLQDFDKASELRDKEMELEVQLKD-A 492
Query: 320 DKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVI 379
+ G+++++A VV E DI IV++WTG+PV K++ ES+ LL +E+TLH+R+I
Sbjct: 493 ESGEQINRA---------VVGEEDIAQIVASWTGVPVNKLTESESEVLLHLEDTLHQRLI 543
Query: 380 GQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIR 439
GQ++AV A+S+AIRRARVGLKNPNRPIASFIFSGPTGVGK+ELAK+LA+Y+FGSEE MIR
Sbjct: 544 GQEQAVTAVSKAIRRARVGLKNPNRPIASFIFSGPTGVGKTELAKSLASYFFGSEENMIR 603
Query: 440 LDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMML 499
LDMSEFMERHTVSKLIGSPPG+VGY EGGQLTEAVRR+PYTV+LFDEIEKAHPD+FNM+L
Sbjct: 604 LDMSEFMERHTVSKLIGSPPGFVGYEEGGQLTEAVRRKPYTVLLFDEIEKAHPDIFNMLL 663
Query: 500 QILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSL 559
Q+L+DG LTD+KGR VDFKNTL+I+TSN+GS VIEKGG +GF+L+ DE +++YNRIK+L
Sbjct: 664 QMLDDGHLTDAKGRKVDFKNTLIILTSNIGSRVIEKGGGGLGFNLE-DEAEANYNRIKTL 722
Query: 560 VTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFR 619
V EELK YFRPEFLNRLDE+IVF QL K E+KEIA+I+LKEV RL K+I LQ++E F+
Sbjct: 723 VNEELKNYFRPEFLNRLDEIIVFTQLQKDEIKEIAEILLKEVSSRLAEKEISLQISESFK 782
Query: 620 ERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTVL 676
+ VV+EGY+PSYGARPLRRAIM LLEDS+AE ML+ +I GD+ ++DVD DG V V+
Sbjct: 783 DLVVQEGYDPSYGARPLRRAIMNLLEDSLAEAMLSGQITAGDTALIDVDDDGKVQVI 839
>gi|75910545|ref|YP_324841.1| UvrB/UvrC protein [Anabaena variabilis ATCC 29413]
gi|75704270|gb|ABA23946.1| UvrB/UvrC protein [Anabaena variabilis ATCC 29413]
Length = 814
Score = 954 bits (2467), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 466/662 (70%), Positives = 562/662 (84%), Gaps = 13/662 (1%)
Query: 14 GGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPG 73
GGGS N+ PT+EE+G NLTKLA+EGKLDPVVGRQ +IER VQILGRRTKNNP LIGEPG
Sbjct: 152 GGGSRRNQTPTIEEFGRNLTKLAKEGKLDPVVGRQKEIERAVQILGRRTKNNPVLIGEPG 211
Query: 74 VGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQS 133
VGKTAIAEGLAQRI + DVPD ++ K+VI+LDMG LVAGT++RG+FEER+KK++EE++ +
Sbjct: 212 VGKTAIAEGLAQRIINQDVPDILQDKQVISLDMGSLVAGTRFRGDFEERIKKIVEEVRSA 271
Query: 134 DEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALE 193
IIL IDE+HTL+GAG EG +DAANILKP+LARGELQCIGATTLDEYR+HIE+D ALE
Sbjct: 272 GNIILVIDEIHTLVGAGGTEGGLDAANILKPALARGELQCIGATTLDEYRQHIERDAALE 331
Query: 194 RRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKA 253
RRFQP+ V EPSV ETI IL GLR YE HHK+ +DEA+V+AAQL+ +YISDRFLPDKA
Sbjct: 332 RRFQPIMVGEPSVAETIDILYGLRGAYEQHHKVHISDEAVVAAAQLADRYISDRFLPDKA 391
Query: 254 IDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKA 313
IDLIDEAGSRVRLR++Q+ +EL+++L ITK KNEAVR QDF+KA +LRD E+ L+
Sbjct: 392 IDLIDEAGSRVRLRNSQISPN-KELKRQLTDITKSKNEAVRVQDFDKAAKLRDEEIALET 450
Query: 314 QISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEET 373
++ +A T + PVV E DI IV++WTG+PV K++ ES+ LL +E+T
Sbjct: 451 EL-----------QAATTGQTIKPVVDEEDIAQIVASWTGVPVNKLTESESELLLHLEDT 499
Query: 374 LHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGS 433
LHKR+IGQ++AV ++SRAIRRARVGLK+PNRPIASFIFSGPTGVGK+ELAKALAAY+FG+
Sbjct: 500 LHKRLIGQEQAVTSVSRAIRRARVGLKSPNRPIASFIFSGPTGVGKTELAKALAAYFFGA 559
Query: 434 EEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPD 493
E+AMIRLDMSE+ME HTVSKLIGSPPGYVGY EGGQLTEAVRRRPYTV+LFDEIEKAHPD
Sbjct: 560 EDAMIRLDMSEYMESHTVSKLIGSPPGYVGYDEGGQLTEAVRRRPYTVLLFDEIEKAHPD 619
Query: 494 VFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSY 553
VFNM+LQIL+DG +TD+KGR VDFKNTL+I+TSN+GS VIEKGG +GF+ D ++ ++SY
Sbjct: 620 VFNMLLQILDDGHITDAKGRKVDFKNTLIILTSNIGSKVIEKGGGGLGFEFD-NQAEASY 678
Query: 554 NRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQ 613
NRI++LV EELK YFRPEFLNRLDE+IVF QL++ EVK+IADIML++V RL K I L+
Sbjct: 679 NRIRNLVNEELKNYFRPEFLNRLDEVIVFTQLSRDEVKQIADIMLRDVASRLTEKGITLE 738
Query: 614 VTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNV 673
VTERF+E VV EGYNPSYGARPLRRAIMRLLEDS+AE +L+ EI EGD+ I DV+ DG V
Sbjct: 739 VTERFKELVVTEGYNPSYGARPLRRAIMRLLEDSLAEVLLSGEITEGDTAIADVNDDGQV 798
Query: 674 TV 675
+
Sbjct: 799 QI 800
>gi|428300697|ref|YP_007139003.1| ATPase [Calothrix sp. PCC 6303]
gi|428237241|gb|AFZ03031.1| ATPase AAA-2 domain protein [Calothrix sp. PCC 6303]
Length = 817
Score = 951 bits (2458), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 464/671 (69%), Positives = 569/671 (84%), Gaps = 14/671 (2%)
Query: 10 GAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLI 69
GA GG + LEE+G NLTKLA+EGKLDPVVGR +IER VQILGRRTKNNP LI
Sbjct: 153 GASSGGQRRNQQSLMLEEFGKNLTKLAQEGKLDPVVGRANEIERAVQILGRRTKNNPVLI 212
Query: 70 GEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEE 129
GEPGVGKTAIAEGLAQRI + DVP+ + GK+V++LDMGL+VAGT++RG+FEERLKK+MEE
Sbjct: 213 GEPGVGKTAIAEGLAQRIVNQDVPEILLGKQVVSLDMGLMVAGTRFRGDFEERLKKVMEE 272
Query: 130 IKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKD 189
I+ IIL IDE+HTL+GAG EG +DAANI+KP+LARGELQC+GATTL+EYR +IE+D
Sbjct: 273 IRTEGNIILVIDEIHTLVGAGGVEGGMDAANIMKPALARGELQCLGATTLNEYR-NIERD 331
Query: 190 PALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFL 249
ALERRFQP+ V EPSV+ETI IL+GLR YE HH++ TDEAL +AA+LS +YISDRFL
Sbjct: 332 AALERRFQPILVGEPSVEETIHILQGLRSVYEQHHRVTITDEALQAAAELSDRYISDRFL 391
Query: 250 PDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREM 309
PDKAIDLIDEAGSRVRLR++Q+ + +REL+++LR ++KEK+EAVR QDFEKAG+LRD+E+
Sbjct: 392 PDKAIDLIDEAGSRVRLRNSQISQ-SRELKRQLRSLSKEKDEAVRVQDFEKAGQLRDKEI 450
Query: 310 DLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLK 369
+L+ QI +AE+ + P+V E DI IV++WTG+PV K++ ES+ L+
Sbjct: 451 ELEGQI-----------QAESSDYNNNPIVNEEDIAQIVASWTGVPVNKLTESESEMLMH 499
Query: 370 MEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAY 429
+E+TLH+R+IGQ++AV A+SRA+RRARVGLKNPNRPIASFIFSGPTGVGK+ELAK+LAAY
Sbjct: 500 LEDTLHQRLIGQEQAVTAVSRAVRRARVGLKNPNRPIASFIFSGPTGVGKTELAKSLAAY 559
Query: 430 YFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEK 489
+FG+E+AMIRLDMSEFMERHTVSKLIGSPPGYVGY EGGQLTEAVRR+PYTV+LFDEIEK
Sbjct: 560 FFGAEDAMIRLDMSEFMERHTVSKLIGSPPGYVGYEEGGQLTEAVRRKPYTVILFDEIEK 619
Query: 490 AHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEK 549
AHPDVFNM+LQ+L+DG LTD+KGR VDFKNTL+I+TSN+GS VIEKGG IGF D D
Sbjct: 620 AHPDVFNMLLQLLDDGHLTDAKGRKVDFKNTLIILTSNIGSKVIEKGGGGIGFQFD-DAS 678
Query: 550 DSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKD 609
++SYNRIK+LV EELK +FRPEFLNRLD++IVF QL K EVK+IA+IML +V RLK +
Sbjct: 679 EASYNRIKTLVNEELKNFFRPEFLNRLDDIIVFTQLNKDEVKQIAEIMLLDVGSRLKERG 738
Query: 610 IELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDS 669
I LQV++RF+ERVV+EGY+PSYGARPLRRAIMRLLEDS+AE ML+ +I +GD+ ++DVD
Sbjct: 739 IILQVSDRFKERVVQEGYDPSYGARPLRRAIMRLLEDSLAEAMLSGQIVDGDTALIDVDD 798
Query: 670 DGNVTVLNGSS 680
DG V V+ S
Sbjct: 799 DGKVKVIKSES 809
>gi|17229455|ref|NP_486003.1| endopeptidase Clp ATP-binding chain [Nostoc sp. PCC 7120]
gi|17131053|dbj|BAB73662.1| endopeptidase Clp ATP-binding chain [Nostoc sp. PCC 7120]
Length = 814
Score = 948 bits (2450), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 462/662 (69%), Positives = 560/662 (84%), Gaps = 13/662 (1%)
Query: 14 GGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPG 73
GGGS N+ P +EE+G NLTKLA+EGKLDPVVGRQ +IER VQILGRRTKNNP LIGEPG
Sbjct: 152 GGGSRRNQTPMMEEFGRNLTKLAKEGKLDPVVGRQKEIERTVQILGRRTKNNPVLIGEPG 211
Query: 74 VGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQS 133
VGKTAIAEGLAQRI + DVPD ++ K+V++LDMG LVAGT++RG+FEER+KK++EE++ +
Sbjct: 212 VGKTAIAEGLAQRIINQDVPDILQDKQVVSLDMGSLVAGTRFRGDFEERIKKIVEEVRSA 271
Query: 134 DEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALE 193
IIL IDE+HTL+GAG EG +DAANILKP+LARGELQCIGATTLDEYR++IE+D ALE
Sbjct: 272 GNIILVIDEIHTLVGAGGTEGGLDAANILKPALARGELQCIGATTLDEYRQYIERDAALE 331
Query: 194 RRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKA 253
RRFQP+ V EPSV ETI IL GLR YE HHK+ +DEA+V+AAQL+ +YISDRFLPDKA
Sbjct: 332 RRFQPIMVGEPSVAETIDILYGLRGAYEQHHKVHISDEAVVAAAQLADRYISDRFLPDKA 391
Query: 254 IDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKA 313
IDLIDEAGSRVRLR++Q+ +EL+++L ITK KNEAVR QDF+KA +LRD E+ L+
Sbjct: 392 IDLIDEAGSRVRLRNSQISPN-KELKRQLTDITKSKNEAVRLQDFDKAAKLRDEEIALET 450
Query: 314 QISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEET 373
++ +A T + PVV E DI IV++WTG+PV K++ ES+ LL +E+T
Sbjct: 451 EL-----------QAATTGQTIKPVVDEEDIAQIVASWTGVPVNKLTESESELLLHLEDT 499
Query: 374 LHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGS 433
LHKR+IGQ++AV ++SRAIRRARVGLK+PNRPIASFIFSGPTGVGK+ELAKALAAY+FG+
Sbjct: 500 LHKRLIGQEQAVTSVSRAIRRARVGLKSPNRPIASFIFSGPTGVGKTELAKALAAYFFGA 559
Query: 434 EEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPD 493
E+AMIR DMSE+ME HTVSKLIGSPPGYVGY EGGQLTEAVRRRPYTV+LFDEIEKAHPD
Sbjct: 560 EDAMIRFDMSEYMESHTVSKLIGSPPGYVGYDEGGQLTEAVRRRPYTVLLFDEIEKAHPD 619
Query: 494 VFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSY 553
VFNM+LQ+L+DG LTD+KGR VDFKNTL+I+TSN+GS VIEKGG +GF+ D ++ ++SY
Sbjct: 620 VFNMLLQLLDDGHLTDAKGRKVDFKNTLIILTSNIGSKVIEKGGGGLGFEFD-NQAEASY 678
Query: 554 NRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQ 613
NRI++LV EELK YFRPEFLNRLDE+IVF QL++ EVK+IADIML++V RL K I L+
Sbjct: 679 NRIRNLVNEELKNYFRPEFLNRLDEVIVFTQLSRDEVKQIADIMLRDVASRLTEKGITLE 738
Query: 614 VTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNV 673
VTERF+E VV EGYNPSYGARPLRRAIMRLLEDS+AE +L+ EI EGD+ I DV+ DG V
Sbjct: 739 VTERFKELVVTEGYNPSYGARPLRRAIMRLLEDSLAEVLLSGEITEGDTAIADVNDDGQV 798
Query: 674 TV 675
+
Sbjct: 799 QI 800
>gi|30468134|ref|NP_849021.1| Clp protease ATP binding subunit [Cyanidioschyzon merolae strain
10D]
gi|30409234|dbj|BAC76183.1| ATP-dependent clp protease ATP-binding subunit (chloroplast)
[Cyanidioschyzon merolae strain 10D]
Length = 821
Score = 948 bits (2450), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 475/677 (70%), Positives = 582/677 (85%), Gaps = 7/677 (1%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
M+ E++E V +GGG S ++ PTLEE+G NLT+LA EG+LDPVVGR+ +IERV+QILGR
Sbjct: 141 MLDETSEVV---IGGGYSRSRTPTLEEFGVNLTELAMEGELDPVVGREKEIERVIQILGR 197
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNP LIGEPGVGKTAIAEGLAQRIA D+PD +E KVITLD+GLLVAGTKYRGEFE
Sbjct: 198 RTKNNPVLIGEPGVGKTAIAEGLAQRIADRDIPDILEDMKVITLDIGLLVAGTKYRGEFE 257
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
ERLKK+M+EI++ +IL IDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTL+
Sbjct: 258 ERLKKVMDEIREVGNVILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLE 317
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRKHIEKD ALERRFQPV V EP+VDETI+ILKGLR+RYE HH++R +D AL +AA+LS
Sbjct: 318 EYRKHIEKDAALERRFQPVMVGEPTVDETIEILKGLRDRYEEHHRVRISDAALEAAAKLS 377
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
QYI+DR+LPDKAIDLIDEAGSRVRL + +LP+ EL+KELR++ + K+E +R FE
Sbjct: 378 SQYIADRYLPDKAIDLIDEAGSRVRLMYYKLPKVTLELDKELREVMRLKDEMIREDHFEI 437
Query: 301 AGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVS 360
A ELRDRE ++++QI A+ +E + + + PVV+E DI IV++WTGIPV+K++
Sbjct: 438 AAELRDREKEIRSQIMAMTKSHRE--ETQEQILQARPVVSEEDIAQIVASWTGIPVKKLT 495
Query: 361 TDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 420
ES++LL MEETLH+R++GQ+EAV A+S+AIRRARVGLKNPNRPIASFIFSGPTGVGK+
Sbjct: 496 RSESEKLLHMEETLHQRIVGQNEAVSAVSKAIRRARVGLKNPNRPIASFIFSGPTGVGKT 555
Query: 421 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 480
EL KALA+Y+FGS EAM+RLDMSE+MERHTVSKLIGSPPGYVGY EGGQLTEAVR+RPYT
Sbjct: 556 ELTKALASYFFGSNEAMVRLDMSEYMERHTVSKLIGSPPGYVGYNEGGQLTEAVRKRPYT 615
Query: 481 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI 540
V+LFDEIEKAHPDVFN++LQILEDGRLTDSKGRTVDFKNTLLIMTSN+GS +IEKGG +
Sbjct: 616 VILFDEIEKAHPDVFNILLQILEDGRLTDSKGRTVDFKNTLLIMTSNIGSKIIEKGGGGL 675
Query: 541 GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 600
GF+L +D+ Y+R+K+LV EELKQYFRPEFLNR+DE+IVFRQLTK EV +IA++MLKE
Sbjct: 676 GFELGDSWQDTQYSRLKNLVNEELKQYFRPEFLNRIDEIIVFRQLTKEEVGQIAEMMLKE 735
Query: 601 VFDRL-KTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 659
V+DRL + + I+LQVT+RF+ +++EEGY+ +YGARPLRRAIM+ LED +AE +LA +
Sbjct: 736 VYDRLAQQQQIQLQVTDRFKRKIIEEGYSATYGARPLRRAIMKWLEDPLAEHVLANTLSP 795
Query: 660 GDSVIVDVDSDGNVTVL 676
G + +VD+D + +V VL
Sbjct: 796 GMTAVVDLDGE-DVKVL 811
>gi|209522992|ref|ZP_03271549.1| ATPase AAA-2 domain protein [Arthrospira maxima CS-328]
gi|209496579|gb|EDZ96877.1| ATPase AAA-2 domain protein [Arthrospira maxima CS-328]
Length = 824
Score = 947 bits (2449), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 468/674 (69%), Positives = 567/674 (84%), Gaps = 10/674 (1%)
Query: 7 EAVGAGVGGGS--SGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKN 64
E V A GG S K TL+E+ TNLT+LA +GKLDP+VGR +IERV+QILGRRTKN
Sbjct: 144 EEVPASAGGNSRSQSRKTATLDEFSTNLTQLAAQGKLDPIVGRDREIERVIQILGRRTKN 203
Query: 65 NPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLK 124
NP LIGEPGVGKTAIAEGLAQRI +G+VP+ +E ++V++L+MG LVAGT++RGEFEERLK
Sbjct: 204 NPVLIGEPGVGKTAIAEGLAQRIINGNVPELLENRQVVSLEMGTLVAGTRFRGEFEERLK 263
Query: 125 KLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRK 184
K+++EIK + IIL IDE+HTL+GAGA EG +DAAN+LKP+LARGELQCIGATTLDEYRK
Sbjct: 264 KIVQEIKANGNIILLIDEIHTLVGAGAIEGTMDAANMLKPALARGELQCIGATTLDEYRK 323
Query: 185 HIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYI 244
+IE+D ALERRFQPV V EPSV+ETI+IL GLR YE HH+L +DEA+++AA+LS++YI
Sbjct: 324 YIERDAALERRFQPVMVGEPSVEETIEILFGLRSAYEQHHRLTISDEAVLAAAKLSHRYI 383
Query: 245 SDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGEL 304
SDRFLPDKAIDLIDEAGSRVR+ H++LP E R+L+ EL I K+K+ AV+ QDF+KAGEL
Sbjct: 384 SDRFLPDKAIDLIDEAGSRVRVMHSKLPPEVRDLKVELSDIVKQKDVAVQVQDFDKAGEL 443
Query: 305 RDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDES 364
RDRE+ K QI A S+ ET +VTE DI ++SAWTGIPV K++ ES
Sbjct: 444 RDRELKCKDQIEA-------ASQVETSI-KTNLIVTEEDIADVLSAWTGIPVTKMTESES 495
Query: 365 DRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAK 424
+L+ ME+TLH+R+IGQ EAV A+SRAIRRARVGLKNPNRPIASFIFSGPTGVGK+EL K
Sbjct: 496 YKLMHMEDTLHQRLIGQHEAVSAVSRAIRRARVGLKNPNRPIASFIFSGPTGVGKTELTK 555
Query: 425 ALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLF 484
ALA Y+FGS EAMIRLDMSEFMERHTVSKLIGSPPG+VGY EGGQLTEAVRRRPYTV+LF
Sbjct: 556 ALAYYFFGSMEAMIRLDMSEFMERHTVSKLIGSPPGFVGYDEGGQLTEAVRRRPYTVILF 615
Query: 485 DEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDL 544
DEIEKAHPDVFNM+LQILEDGRLTD+KGRTV FKNTL+IMTSN+GS VIEKGG +GF+
Sbjct: 616 DEIEKAHPDVFNMLLQILEDGRLTDAKGRTVSFKNTLIIMTSNIGSKVIEKGGGGLGFEF 675
Query: 545 DYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDR 604
+ ++++ Y RI++LV EELKQYFRPEF+NRLDE+IVFR+LTK EVK+IADI+L+EVF R
Sbjct: 676 EQSQEEAQYTRIRNLVNEELKQYFRPEFINRLDEIIVFRKLTKDEVKQIADILLEEVFAR 735
Query: 605 LKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVI 664
L+ K+I L+V++RF++ +VE GY+P+YGARPLRRAIM LLED +AE ML+ +K GD +
Sbjct: 736 LRDKEIVLEVSDRFKDHIVEVGYDPNYGARPLRRAIMNLLEDVLAETMLSGTLKPGDQAL 795
Query: 665 VDVDSDGNVTVLNG 678
VD+D DG V VL G
Sbjct: 796 VDLDDDGQVKVLTG 809
>gi|423062414|ref|ZP_17051204.1| ATPase AAA-2 domain protein [Arthrospira platensis C1]
gi|406716322|gb|EKD11473.1| ATPase AAA-2 domain protein [Arthrospira platensis C1]
Length = 824
Score = 947 bits (2448), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 468/674 (69%), Positives = 567/674 (84%), Gaps = 10/674 (1%)
Query: 7 EAVGAGVGGGS--SGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKN 64
E V A GG S K TL+E+ TNLT+LA +GKLDP+VGR +IERV+QILGRRTKN
Sbjct: 144 EEVPASAGGNSRSQSRKTATLDEFSTNLTQLAAQGKLDPIVGRDREIERVIQILGRRTKN 203
Query: 65 NPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLK 124
NP LIGEPGVGKTAIAEGLAQRI +G+VP+ +E ++V++L+MG LVAGT++RGEFEERLK
Sbjct: 204 NPVLIGEPGVGKTAIAEGLAQRIINGNVPELLENRQVVSLEMGTLVAGTRFRGEFEERLK 263
Query: 125 KLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRK 184
K+++EIK + IIL IDE+HTL+GAGA EG +DAAN+LKP+LARGELQCIGATTLDEYRK
Sbjct: 264 KIVQEIKANGNIILLIDEIHTLVGAGAIEGTMDAANMLKPALARGELQCIGATTLDEYRK 323
Query: 185 HIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYI 244
+IE+D ALERRFQPV V EPSV+ETI+IL GLR YE HH+L +DEA+++AA+LS++YI
Sbjct: 324 YIERDAALERRFQPVMVGEPSVEETIEILFGLRSAYEQHHRLTISDEAVLAAAKLSHRYI 383
Query: 245 SDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGEL 304
SDRFLPDKAIDLIDEAGSRVR+ H++LP E R+L+ EL I K+K+ AV+ QDF+KAGEL
Sbjct: 384 SDRFLPDKAIDLIDEAGSRVRVMHSKLPPEVRDLKVELSDIVKQKDVAVQVQDFDKAGEL 443
Query: 305 RDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDES 364
RDRE+ K QI A S+ ET +VTE DI ++SAWTGIPV K++ ES
Sbjct: 444 RDRELKCKDQIEA-------ASQVETSI-KTNLIVTEEDIADVLSAWTGIPVTKMTESES 495
Query: 365 DRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAK 424
+L+ ME+TLH+R+IGQ EAV A+SRAIRRARVGLKNPNRPIASFIFSGPTGVGK+EL K
Sbjct: 496 YKLMHMEDTLHQRLIGQHEAVSAVSRAIRRARVGLKNPNRPIASFIFSGPTGVGKTELTK 555
Query: 425 ALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLF 484
ALA Y+FGS EAMIRLDMSEFMERHTVSKLIGSPPG+VGY EGGQLTEAVRRRPYTV+LF
Sbjct: 556 ALAYYFFGSMEAMIRLDMSEFMERHTVSKLIGSPPGFVGYDEGGQLTEAVRRRPYTVILF 615
Query: 485 DEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDL 544
DEIEKAHPDVFNM+LQILEDGRLTD+KGRTV FKNTL+IMTSN+GS VIEKGG +GF+
Sbjct: 616 DEIEKAHPDVFNMLLQILEDGRLTDAKGRTVSFKNTLIIMTSNIGSKVIEKGGGGLGFEF 675
Query: 545 DYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDR 604
+ ++++ Y RI++LV EELKQYFRPEF+NRLDE+IVFR+LTK EVK+IADI+L+EVF R
Sbjct: 676 EQSQEEAQYTRIRNLVNEELKQYFRPEFINRLDEIIVFRKLTKDEVKQIADILLEEVFAR 735
Query: 605 LKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVI 664
L+ K+I L+V++RF++ +VE GY+P+YGARPLRRAIM LLED +AE ML+ +K GD +
Sbjct: 736 LRDKEIVLEVSDRFKDHIVEVGYDPNYGARPLRRAIMNLLEDVLAETMLSGTLKPGDQAL 795
Query: 665 VDVDSDGNVTVLNG 678
VD+D DG V VL G
Sbjct: 796 VDLDDDGQVKVLTG 809
>gi|427728669|ref|YP_007074906.1| chaperone ATPase [Nostoc sp. PCC 7524]
gi|427364588|gb|AFY47309.1| ATPase with chaperone activity, ATP-binding subunit [Nostoc sp. PCC
7524]
Length = 815
Score = 946 bits (2444), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 469/665 (70%), Positives = 568/665 (85%), Gaps = 15/665 (2%)
Query: 13 VGGGSS--GNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIG 70
VGGGS G + T EE+G NLTKLA+EGKLDPVVGRQ +IER +QILGRRTKNNP LIG
Sbjct: 150 VGGGSPRRGQTLTT-EEFGRNLTKLAQEGKLDPVVGRQKEIERAIQILGRRTKNNPVLIG 208
Query: 71 EPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEI 130
EPGVGKTAIAEGLAQRI + DVP+ +EGK+VI+LDMGLLVAGT++RG+FEER+KK+++E+
Sbjct: 209 EPGVGKTAIAEGLAQRIINQDVPEVLEGKQVISLDMGLLVAGTRFRGDFEERIKKIVDEV 268
Query: 131 KQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDP 190
+ + IIL IDE+HTL+GAG EG +DAANILKP+LARGELQCIGATTLDEYR+HIE+D
Sbjct: 269 RTAGNIILVIDEIHTLVGAGGTEGGLDAANILKPALARGELQCIGATTLDEYRQHIERDA 328
Query: 191 ALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLP 250
ALERRFQP+ V EPSV+ETI+IL GLR YE HHK++ +DEA+V+AA+LS +YISDRFLP
Sbjct: 329 ALERRFQPILVGEPSVEETIEILYGLRGVYEQHHKVQISDEAVVAAAELSDRYISDRFLP 388
Query: 251 DKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMD 310
DKAIDLIDEAGSRVRLR++ + + +EL+++L Q+TK KNEAVR Q+F++AGELRD+E+
Sbjct: 389 DKAIDLIDEAGSRVRLRNSHISTD-KELKRKLAQVTKAKNEAVRLQNFDQAGELRDQEIA 447
Query: 311 LKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKM 370
L+ ++ A A E VV E DI IV++WTG+PV K++ ES+ LL +
Sbjct: 448 LETELQA----------ASVEKVIYPIVVDEEDIAQIVASWTGVPVNKLTESESELLLHL 497
Query: 371 EETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYY 430
E+TLHKR+IGQ++AV A+SRAIRRARVGLKNPNRPIASFIFSGPTGVGK+ELAKALAAY+
Sbjct: 498 EDTLHKRLIGQEQAVTAVSRAIRRARVGLKNPNRPIASFIFSGPTGVGKTELAKALAAYF 557
Query: 431 FGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKA 490
FG+E+AMIRLDMSE+ME HTVSKLIGSPPGYVGY EGGQLTEAVRRRPYTV+LFDEIEKA
Sbjct: 558 FGAEDAMIRLDMSEYMESHTVSKLIGSPPGYVGYDEGGQLTEAVRRRPYTVLLFDEIEKA 617
Query: 491 HPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKD 550
HPDVFNM+LQIL+DG LTD+KGR VDFKNTL+I+TSN+GS VIEKGG +GF+ D ++ +
Sbjct: 618 HPDVFNMLLQILDDGHLTDAKGRKVDFKNTLIILTSNIGSKVIEKGGGGLGFEFD-NQPE 676
Query: 551 SSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDI 610
+SY+RI++LV EELK YFRPEFLNR+DE+IVF QL+K EVK+IADIML+EV RL K I
Sbjct: 677 ASYHRIRNLVNEELKNYFRPEFLNRVDEIIVFTQLSKDEVKQIADIMLREVASRLTEKGI 736
Query: 611 ELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSD 670
L+VTERF++ VV EGYNPSYGARPLRRAIMRLLEDS+AE MLA E++EG + IVDV+ D
Sbjct: 737 ILEVTERFKDLVVTEGYNPSYGARPLRRAIMRLLEDSLAEAMLAGELREGCTAIVDVNDD 796
Query: 671 GNVTV 675
G V V
Sbjct: 797 GQVQV 801
>gi|428309114|ref|YP_007120091.1| chaperone ATPase [Microcoleus sp. PCC 7113]
gi|428250726|gb|AFZ16685.1| ATPase with chaperone activity, ATP-binding subunit [Microcoleus
sp. PCC 7113]
Length = 827
Score = 944 bits (2440), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 454/662 (68%), Positives = 563/662 (85%), Gaps = 6/662 (0%)
Query: 16 GSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVG 75
G + K +LEE+G NLT+LA EGKLDPVVGR +IERV+QILGRRTKNNP LIGEPGVG
Sbjct: 160 GETPTKKASLEEFGRNLTQLALEGKLDPVVGRAKEIERVIQILGRRTKNNPVLIGEPGVG 219
Query: 76 KTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDE 135
KTAIAEGLAQRI VPD +E K+V TLDMGLL++GT+YRG+FEERLK++MEE++QS
Sbjct: 220 KTAIAEGLAQRIVDNHVPDLLEDKQVFTLDMGLLLSGTRYRGDFEERLKQIMEEVRQSGN 279
Query: 136 IILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERR 195
IIL IDE+HTL+GAG+ EG +DAAN+LKP+LARGELQC+GATTLDEYRKHIE+D ALERR
Sbjct: 280 IILVIDEIHTLVGAGSTEGGMDAANLLKPALARGELQCLGATTLDEYRKHIERDAALERR 339
Query: 196 FQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAID 255
FQPV V EPSV++TI+IL GLR+ YE HK++ +++AL +AA+LS +YI DRFLPDKAID
Sbjct: 340 FQPVMVGEPSVEDTIEILYGLRDAYEQFHKVKISNQALEAAAKLSDRYIQDRFLPDKAID 399
Query: 256 LIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQI 315
LIDEAGSR+ L H+ A+EL++ELR+IT++K EAV+ Q+F+KA ++RDRE++L++Q+
Sbjct: 400 LIDEAGSRIHLIHSGPSPAAKELKQELRRITQKKEEAVKAQNFDKASQMRDRELELESQL 459
Query: 316 SALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLH 375
A+++ +E + + T P VTE DI IV++WTGIPV K++ ES LL +E+TLH
Sbjct: 460 QAMLNNDQEQNASLT------PTVTEEDIAQIVASWTGIPVNKLTESESAMLLHLEDTLH 513
Query: 376 KRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEE 435
+R++GQ+EAV A+SRAIRRARVGLKNPNRPIASFIFSGPTGVGK+ELAKALAAY+FGSEE
Sbjct: 514 QRLVGQEEAVVAVSRAIRRARVGLKNPNRPIASFIFSGPTGVGKTELAKALAAYFFGSEE 573
Query: 436 AMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVF 495
AMIRLDMSEFME HTVSKLIGSPPGYVGY EGGQLTEAVRR+PYTV+LFDEIEKAHPDVF
Sbjct: 574 AMIRLDMSEFMESHTVSKLIGSPPGYVGYDEGGQLTEAVRRKPYTVLLFDEIEKAHPDVF 633
Query: 496 NMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNR 555
NM+LQ+L+DGRLTD++GRTVDFKNTL+IMTSN+GS VIEKGG GF+ +E +S Y R
Sbjct: 634 NMLLQLLDDGRLTDAQGRTVDFKNTLIIMTSNIGSKVIEKGGSSFGFESSGNEAESRYLR 693
Query: 556 IKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVT 615
I+ V E+LK YFRPEFLNRLDE+IVFRQLT+ EVK+IAD+ML+++ RL + I L+VT
Sbjct: 694 IRDKVNEDLKGYFRPEFLNRLDEIIVFRQLTRDEVKQIADLMLRDISIRLLEQGIALEVT 753
Query: 616 ERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTV 675
RF++R+V+EGY+PSYGARPLRRAIMRLLEDS+AE ML+ ++ +GD+ ++DVD G V V
Sbjct: 754 GRFKDRLVDEGYDPSYGARPLRRAIMRLLEDSLAEAMLSGQVNDGDTAVIDVDDKGQVKV 813
Query: 676 LN 677
L
Sbjct: 814 LQ 815
>gi|409991063|ref|ZP_11274359.1| ATPase [Arthrospira platensis str. Paraca]
gi|291567331|dbj|BAI89603.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Arthrospira
platensis NIES-39]
gi|409938081|gb|EKN79449.1| ATPase [Arthrospira platensis str. Paraca]
Length = 824
Score = 944 bits (2440), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 472/674 (70%), Positives = 568/674 (84%), Gaps = 10/674 (1%)
Query: 7 EAVGAGVGGGS--SGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKN 64
E V A GG S SG K TL+E+ TNLT+LA +GKLDP+VGR +IERV+QILGRRTKN
Sbjct: 144 EEVPASAGGTSRSSGRKTATLDEFSTNLTQLAAQGKLDPIVGRDREIERVIQILGRRTKN 203
Query: 65 NPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLK 124
NP LIGEPGVGKTAIAEGLAQRI +G+VP+ +E ++V++L+MG LVAGT++RGEFEERLK
Sbjct: 204 NPVLIGEPGVGKTAIAEGLAQRIINGNVPELLENRQVVSLEMGTLVAGTRFRGEFEERLK 263
Query: 125 KLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRK 184
K+++EIK S IIL IDE+HTL+GAGA EG +DAAN+LKP+LARGELQCIGATTLDEYRK
Sbjct: 264 KIVQEIKASGNIILLIDEIHTLVGAGAIEGTMDAANMLKPALARGELQCIGATTLDEYRK 323
Query: 185 HIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYI 244
+IE+D ALERRFQPV V EPSV+ETI+IL GLR YE HH+L +DEA+++AA+LS++YI
Sbjct: 324 YIERDAALERRFQPVMVGEPSVEETIEILFGLRSAYEQHHRLTISDEAVLAAAKLSHRYI 383
Query: 245 SDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGEL 304
SDRFLPDKAIDLIDEAGSRVR+ H++LP E R+L+ EL I K+K+ AV+ QDFEKAGEL
Sbjct: 384 SDRFLPDKAIDLIDEAGSRVRVMHSKLPPEVRDLKVELSDIVKQKDAAVQAQDFEKAGEL 443
Query: 305 RDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDES 364
RDRE+ K QI A S+ ET +VTE DI ++SAWTGIPV K++ ES
Sbjct: 444 RDRELQCKDQIEA-------ASQVETSI-KTNLIVTEEDIADVLSAWTGIPVTKMTESES 495
Query: 365 DRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAK 424
+L+ ME+TLH+R+IGQ EAV A+SRAIRRARVGLKNPNRPIASFIFSGPTGVGK+EL K
Sbjct: 496 YKLMHMEDTLHQRLIGQHEAVSAVSRAIRRARVGLKNPNRPIASFIFSGPTGVGKTELTK 555
Query: 425 ALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLF 484
ALA Y+FGS EAMIRLDMSEFMERHTVSKLIGSPPG+VGY EGGQLTEAVRRRPYTV+LF
Sbjct: 556 ALAYYFFGSVEAMIRLDMSEFMERHTVSKLIGSPPGFVGYDEGGQLTEAVRRRPYTVILF 615
Query: 485 DEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDL 544
DEIEKAHPDVFNM+LQILEDGRLTD+KGRTV FKNTL+IMTSN+GS VIEKGG +GF+
Sbjct: 616 DEIEKAHPDVFNMLLQILEDGRLTDAKGRTVSFKNTLIIMTSNIGSKVIEKGGGGLGFEF 675
Query: 545 DYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDR 604
+ +D+ Y RI++LV EELKQYFRPEF+NRLDE+IVFR+LTK EVK+IADI+L+EVF R
Sbjct: 676 EESPEDAQYTRIRNLVNEELKQYFRPEFINRLDEIIVFRKLTKDEVKQIADILLEEVFAR 735
Query: 605 LKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVI 664
L+ K+I L+V++RF++ +VE GY+P+YGARPLRRAIM LLED +AE ML+ +K GD +
Sbjct: 736 LRDKEIVLEVSDRFKDHIVEVGYDPNYGARPLRRAIMNLLEDVLAETMLSGTLKPGDQAL 795
Query: 665 VDVDSDGNVTVLNG 678
VD+D DG V V+ G
Sbjct: 796 VDLDDDGQVKVITG 809
>gi|428211805|ref|YP_007084949.1| chaperone ATPase [Oscillatoria acuminata PCC 6304]
gi|428000186|gb|AFY81029.1| ATPase with chaperone activity, ATP-binding subunit [Oscillatoria
acuminata PCC 6304]
Length = 828
Score = 941 bits (2433), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 457/678 (67%), Positives = 563/678 (83%), Gaps = 9/678 (1%)
Query: 2 VGESTEAVGAGVGG----GSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQI 57
VGE+ GA GG G K L E+G NLT+ A EG LDPVVGR+ +IER++QI
Sbjct: 142 VGENPAPAGAVFGGERGRGPGSQKALQLSEFGVNLTEKALEGNLDPVVGRKKEIERIIQI 201
Query: 58 LGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRG 117
LGRRTKNNP L+GEPGVGKTA+AEGLAQRIA+ DVP+T++ K+V TLDMG ++AGT++RG
Sbjct: 202 LGRRTKNNPVLVGEPGVGKTALAEGLAQRIANQDVPETLKDKQVFTLDMGSILAGTRFRG 261
Query: 118 EFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGAT 177
+FEER+K +MEE++Q+ IIL IDE+HTL+GAG+ EG +DAAN+LKP+LARGE QCIGAT
Sbjct: 262 DFEERIKMIMEEVRQAKNIILVIDEIHTLVGAGSVEGGMDAANLLKPALARGEFQCIGAT 321
Query: 178 TLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAA 237
TLDEYRKHIE+D ALERRFQPV + EP++ ETI+IL+G+R RYE HHKL +DEALV+AA
Sbjct: 322 TLDEYRKHIERDAALERRFQPVTIGEPTIQETIEILQGVRVRYEEHHKLTISDEALVAAA 381
Query: 238 QLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQD 297
+LS +YI+DRFLPDKAIDLIDEAGSRVRLR+ ++P R+++K+L ++T EK AVR QD
Sbjct: 382 ELSERYITDRFLPDKAIDLIDEAGSRVRLRNGKMPSALRQMKKQLTEVTAEKEAAVRTQD 441
Query: 298 FEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVE 357
FEKA +LRDRE+ L+ ++ D+ + AE + VVT DI IV+ WT +PV
Sbjct: 442 FEKASKLRDRELTLEEEL----DQRIKNEHAEVQ-NTKNLVVTGEDIAQIVAFWTSVPVS 496
Query: 358 KVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGV 417
K++ ES++L+ MEETLH+R+IGQ+EAVKA+SRAIRRARVGLKNPNRPIASFIFSGPTGV
Sbjct: 497 KLTESESEKLMLMEETLHQRLIGQEEAVKAVSRAIRRARVGLKNPNRPIASFIFSGPTGV 556
Query: 418 GKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRR 477
GK+EL KALAAY+FGSEEAMIRLDMSE+MERHTVSKLIGSPPG+VGY EGGQLTEAVRRR
Sbjct: 557 GKTELTKALAAYFFGSEEAMIRLDMSEYMERHTVSKLIGSPPGFVGYDEGGQLTEAVRRR 616
Query: 478 PYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGG 537
PYTV+LFDEIEKAHPDVFNM+LQ+LEDGRLTD+KGR VDFKNT+LIMTSN+GS VIEKGG
Sbjct: 617 PYTVILFDEIEKAHPDVFNMLLQVLEDGRLTDAKGRVVDFKNTMLIMTSNIGSRVIEKGG 676
Query: 538 RRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIM 597
+GF+ + ++ Y+RI+SLV EELK YFRPEFLNRLDE+IVF QLTK EV EIA+I+
Sbjct: 677 GGLGFEFADNRAEAHYDRIRSLVNEELKNYFRPEFLNRLDEIIVFHQLTKDEVTEIAEIL 736
Query: 598 LKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREI 657
L+++ RL K + L++++RF+ER+VEEGYNPSYGARPLRRAIMRLLED +AE ML+ ++
Sbjct: 737 LRDLLKRLVEKQMTLEISDRFKERLVEEGYNPSYGARPLRRAIMRLLEDHLAEAMLSGKL 796
Query: 658 KEGDSVIVDVDSDGNVTV 675
EGDS +D+D G V V
Sbjct: 797 NEGDSARIDLDEAGEVVV 814
>gi|440684474|ref|YP_007159269.1| ATPase AAA-2 domain protein [Anabaena cylindrica PCC 7122]
gi|428681593|gb|AFZ60359.1| ATPase AAA-2 domain protein [Anabaena cylindrica PCC 7122]
Length = 832
Score = 934 bits (2415), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 460/668 (68%), Positives = 560/668 (83%), Gaps = 13/668 (1%)
Query: 8 AVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPC 67
AV AG G NK ++EE+G NLTKLA+EGKLDPVVGRQ +IER VQILGRRTKNNP
Sbjct: 166 AVLAG-GNSPKRNKNLSIEEFGRNLTKLAQEGKLDPVVGRQKEIERTVQILGRRTKNNPV 224
Query: 68 LIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLM 127
LIGEPGVGKTAIAEGLAQRI + DVP+ + K+VI+LDMG +VAGT++RG+FEERLKK+M
Sbjct: 225 LIGEPGVGKTAIAEGLAQRIINQDVPEVLLNKQVISLDMGSVVAGTRFRGDFEERLKKIM 284
Query: 128 EEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIE 187
EE++ IIL IDE+HTL+GAG EG +DAANILKP+LARGELQCIGATTLDEYRKHIE
Sbjct: 285 EEVRSEGNIILVIDEIHTLVGAGGTEGGLDAANILKPALARGELQCIGATTLDEYRKHIE 344
Query: 188 KDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDR 247
+D ALERRFQP+ V EPS++ETIQIL GLR YE HHK+ +D A+V+AA+LS +YISDR
Sbjct: 345 RDAALERRFQPILVGEPSIEETIQILYGLRGAYEQHHKVHISDAAVVAAAELSDRYISDR 404
Query: 248 FLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDR 307
FLPDKAIDLIDEAGSRVRLR+++ + +EL++EL +TK K EAVR Q+F+KAG+LRD+
Sbjct: 405 FLPDKAIDLIDEAGSRVRLRNSRTATD-KELKRELVGVTKSKEEAVRLQNFDKAGKLRDQ 463
Query: 308 EMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRL 367
E++++ + + ETE P+V E DI IV++WTG+PV K++ ES+ L
Sbjct: 464 EVEIQGR----------LYTEETEKNAKTPIVDEEDIAQIVASWTGVPVNKLTESESELL 513
Query: 368 LKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALA 427
L +E+TLHKR+IGQ++AV +++RAIRRARVGLKNPNRPIASFIFSGPTGVGK+ELAK+LA
Sbjct: 514 LHLEDTLHKRLIGQEQAVTSVARAIRRARVGLKNPNRPIASFIFSGPTGVGKTELAKSLA 573
Query: 428 AYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEI 487
AY+FG+E AMIRLDMSE+ME H VSKLIGSPPGYVGY EGGQLTEAVRR+PYTVVLFDEI
Sbjct: 574 AYFFGAESAMIRLDMSEYMESHNVSKLIGSPPGYVGYDEGGQLTEAVRRKPYTVVLFDEI 633
Query: 488 EKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYD 547
EKAHPDVFNM+LQ+L+DG LTD+KGR VDFKNTL+I+TSNVGS VIEKGG +GF+ D +
Sbjct: 634 EKAHPDVFNMLLQLLDDGHLTDAKGRKVDFKNTLIILTSNVGSKVIEKGGMSLGFEFD-N 692
Query: 548 EKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKT 607
+ D+SY+RI++LV EELK YFRPEFLNRLD++IVF QL K EVK+IA+IML +V RL
Sbjct: 693 QADASYHRIRNLVNEELKAYFRPEFLNRLDDIIVFTQLNKAEVKQIAEIMLVDVASRLTE 752
Query: 608 KDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDV 667
+ I+L+VTE F++RVV EGY+PSYGARPLRRAIMRLLEDS+AE +LA +I EGD+ IVD+
Sbjct: 753 RRIKLEVTESFKDRVVTEGYDPSYGARPLRRAIMRLLEDSLAEALLAGQIGEGDTAIVDI 812
Query: 668 DSDGNVTV 675
D DG V V
Sbjct: 813 DDDGQVIV 820
>gi|428207100|ref|YP_007091453.1| ATPase [Chroococcidiopsis thermalis PCC 7203]
gi|428009021|gb|AFY87584.1| ATPase AAA-2 domain protein [Chroococcidiopsis thermalis PCC 7203]
Length = 828
Score = 934 bits (2414), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 472/678 (69%), Positives = 576/678 (84%), Gaps = 9/678 (1%)
Query: 2 VGESTEAVGAGVGG----GSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQI 57
+GE AG G G++ +K TL+E+GTNLTKLA EGKLDPVVGR+ +++R VQI
Sbjct: 142 LGEVATVASAGRQGRKGFGTAPSKTSTLDEFGTNLTKLAAEGKLDPVVGREKEVQRAVQI 201
Query: 58 LGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRG 117
LGRRTKNNP LIGEPGVGKTAIAEGLAQRIA+ DVPDT+ K++ +LDMG LVAGT+YRG
Sbjct: 202 LGRRTKNNPVLIGEPGVGKTAIAEGLAQRIANNDVPDTLIDKQLYSLDMGSLVAGTRYRG 261
Query: 118 EFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGAT 177
+FEER+K +++E++ + +ILFIDE+HTLIG G EG IDAAN+LKP+LARGELQC+GAT
Sbjct: 262 DFEERIKSVLDEVRSNSSVILFIDEIHTLIGVGGVEGGIDAANMLKPALARGELQCMGAT 321
Query: 178 TLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAA 237
TLDEYRKHIE+D ALERRFQPV V EPSV ETI+IL GLR+RYE HHK++ +D AL +AA
Sbjct: 322 TLDEYRKHIERDAALERRFQPVMVDEPSVVETIEILFGLRDRYEQHHKVKMSDLALAAAA 381
Query: 238 QLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQD 297
QLS +YISDRFLPDKAIDLIDEAGSRVR R+++ E + L++EL Q+TKEK AV QD
Sbjct: 382 QLSDRYISDRFLPDKAIDLIDEAGSRVRFRNSKQSPETQALKQELVQVTKEKEAAVSAQD 441
Query: 298 FEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVE 357
F+ AG+LRDRE++++ Q+ A+ D K+ E E V PVV E DI IV++WTG+PV
Sbjct: 442 FDNAGKLRDRELEIEQQLKAIADNRKQ----EIENASV-PVVDEEDIAQIVASWTGVPVS 496
Query: 358 KVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGV 417
K++ ES+ LL +E+TLH+R+IGQ+EAV A+S+AIRRARVGLKNP+RPIASFIFSGPTGV
Sbjct: 497 KLTESESELLLHLEDTLHQRLIGQEEAVTAVSKAIRRARVGLKNPDRPIASFIFSGPTGV 556
Query: 418 GKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRR 477
GK+ELAK+LAAY+FGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGY EGGQLTEAVRR+
Sbjct: 557 GKTELAKSLAAYFFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYDEGGQLTEAVRRK 616
Query: 478 PYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGG 537
PYTV+LFDEIEKAHPDVFNM+LQI++DGRLTD+KGRTVDFKNTL+I+TSN+GS VIEKGG
Sbjct: 617 PYTVLLFDEIEKAHPDVFNMLLQIMDDGRLTDAKGRTVDFKNTLIILTSNIGSRVIEKGG 676
Query: 538 RRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIM 597
IGF+L D D+ Y+R+++LV EELKQ+FRPEFLNRLDE+IVFRQL K EVK+IADIM
Sbjct: 677 GGIGFELGGDRADAQYDRVRNLVQEELKQHFRPEFLNRLDEIIVFRQLNKNEVKQIADIM 736
Query: 598 LKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREI 657
L+E+ +RL + I L+VTERF+++VV+EGYNPSYGARPLRRA+MRLLEDS+AE ML+ I
Sbjct: 737 LQEISNRLTERSITLKVTERFKDKVVDEGYNPSYGARPLRRAMMRLLEDSLAEAMLSGRI 796
Query: 658 KEGDSVIVDVDSDGNVTV 675
+GD+ +VDVD+DG V V
Sbjct: 797 NDGDTALVDVDADGQVQV 814
>gi|186683718|ref|YP_001866914.1| ATPase [Nostoc punctiforme PCC 73102]
gi|186466170|gb|ACC81971.1| ATPase AAA-2 domain protein [Nostoc punctiforme PCC 73102]
Length = 817
Score = 931 bits (2407), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 459/670 (68%), Positives = 556/670 (82%), Gaps = 11/670 (1%)
Query: 7 EAVGAGVGGGSSGNKMP-TLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNN 65
E A G GS P T+EEYG NLTKLA+EG+LDPVVGR+ +IER +QILGRRTKNN
Sbjct: 144 ENAPAFAGSGSQKRTQPLTMEEYGRNLTKLAQEGRLDPVVGREKEIERAIQILGRRTKNN 203
Query: 66 PCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKK 125
P LIGEPGVGKTAIAEGLAQRI + DVP+T++ K+VI+LDMG LVAGT++RG+FEER+KK
Sbjct: 204 PVLIGEPGVGKTAIAEGLAQRIINQDVPETLQDKQVISLDMGSLVAGTRFRGDFEERIKK 263
Query: 126 LMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKH 185
++EE++ IIL IDE+HTL+GAG EG +DAANILKP+LARGELQCIGATTLDEYRKH
Sbjct: 264 VVEEVRTVGNIILVIDEIHTLVGAGGTEGGLDAANILKPALARGELQCIGATTLDEYRKH 323
Query: 186 IEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYIS 245
IE+D ALERRFQP+ V EPSV+ET+QIL GLR YE HHK+ D ALV+AA+LS +YIS
Sbjct: 324 IERDAALERRFQPIMVGEPSVEETVQILYGLRGAYEQHHKVTILDSALVAAAELSDRYIS 383
Query: 246 DRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELR 305
DRFLPDKAIDLIDEAGSRVRLR++Q +EL++EL +TKEK AVR QDF+KA LR
Sbjct: 384 DRFLPDKAIDLIDEAGSRVRLRNSQ-SSPNKELKRELAGVTKEKEAAVRVQDFDKAVTLR 442
Query: 306 DREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESD 365
D+E+ L Q+ A ++ + VV E DI IV++WTG+PV K++ ES+
Sbjct: 443 DQELKLAEQLQATFTPNEQPVNS--------TVVDEEDIAQIVASWTGVPVNKLTESESE 494
Query: 366 RLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKA 425
LL +E+TLH+R+IGQ++AV A+SR IRRARVGLKNPNRPIASFIFSGPTGVGK+ELAKA
Sbjct: 495 LLLHLEDTLHQRLIGQEQAVSAVSRGIRRARVGLKNPNRPIASFIFSGPTGVGKTELAKA 554
Query: 426 LAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFD 485
LA+Y+FG+E++MIRLDMSE+ME HTV+KLIGSPPGYVGY EGGQLTEAVRR+PYTV+LFD
Sbjct: 555 LASYFFGAEDSMIRLDMSEYMESHTVAKLIGSPPGYVGYDEGGQLTEAVRRKPYTVLLFD 614
Query: 486 EIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLD 545
EIEKAHPDVFNM+LQIL+DG LTD+KGR VDFKNTL+I+TSN+GS VIEKGG +GFD D
Sbjct: 615 EIEKAHPDVFNMLLQILDDGHLTDAKGRKVDFKNTLIILTSNIGSKVIEKGGSGLGFDFD 674
Query: 546 YDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRL 605
+ ++SYNRI++LV EELK YFRPEFLNRLDE+IVF QL++ EVK+IA+IML+EV RL
Sbjct: 675 -TQANASYNRIRTLVNEELKAYFRPEFLNRLDEIIVFTQLSRDEVKQIAEIMLREVSKRL 733
Query: 606 KTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIV 665
K I L+V++RF+E VV+EGYNPSYGARPLRRAIMRLLEDS+AE ML+ EI +GD+ ++
Sbjct: 734 TEKGITLEVSDRFKELVVQEGYNPSYGARPLRRAIMRLLEDSLAEAMLSGEITDGDTALI 793
Query: 666 DVDSDGNVTV 675
DVD D V V
Sbjct: 794 DVDDDSQVRV 803
>gi|75271088|sp|Q53N47.1|CLPC4_ORYSJ RecName: Full=Chaperone protein ClpC4, chloroplastic; AltName:
Full=ATP-dependent Clp protease ATP-binding subunit ClpC
homolog 4; AltName: Full=Casein lytic proteinase C4;
Flags: Precursor
gi|62734338|gb|AAX96447.1| ATPase, AAA family, putative [Oryza sativa Japonica Group]
gi|77549763|gb|ABA92560.1| ATP-dependent Clp protease ATP-binding subunit clpA
CD4B,chloroplast precursor, putative, expressed [Oryza
sativa Japonica Group]
Length = 918
Score = 930 bits (2403), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 454/671 (67%), Positives = 563/671 (83%), Gaps = 18/671 (2%)
Query: 11 AGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIG 70
A V + G K+ TL EYGTNLTKLAEEGKLDPVVGRQ QI+ VVQIL RRTKNNPCLIG
Sbjct: 252 AAVRRATRGAKLATLMEYGTNLTKLAEEGKLDPVVGRQKQIDHVVQILSRRTKNNPCLIG 311
Query: 71 EPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEI 130
EPGVGKTAIAEGLAQ IA+GDVP+TI+ K VI+LDMGLL+AGTKYRGE EERLK ++EEI
Sbjct: 312 EPGVGKTAIAEGLAQLIATGDVPETIQQKTVISLDMGLLLAGTKYRGELEERLKNILEEI 371
Query: 131 KQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDP 190
KQ+ EIILF+DEVHTL+ AG+AEGAIDAANI KP+LARGELQCIGATT++EYRKHIEKD
Sbjct: 372 KQNGEIILFLDEVHTLVTAGSAEGAIDAANIFKPALARGELQCIGATTINEYRKHIEKDA 431
Query: 191 ALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLP 250
ALERRFQPVK+PE +VDET+ ILKGLRERY+ HHK++YTDEALV+AA+LS+++I DRFLP
Sbjct: 432 ALERRFQPVKIPESTVDETVGILKGLRERYQGHHKVQYTDEALVAAAELSHKHIRDRFLP 491
Query: 251 DKAIDLIDEAGSRVRLRHAQL--PEEARELEKELRQITKEKNEAVRGQDFEKAGELRDRE 308
DKAIDL+DEAGS VRLR+AQ ++ +LE EL++ KEKN+A+ Q+F +A +LRD E
Sbjct: 492 DKAIDLMDEAGSIVRLRNAQCKPSKKVNDLEAELKKTLKEKNDAISIQNFRRAKQLRDHE 551
Query: 309 MDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLL 368
+ L+ ISAL DK +M + + A PVVTE D++H +S WTG+P+ KVS DES +LL
Sbjct: 552 LQLRTNISALTDKKTQMMEPDAIA---MPVVTEDDVRHAISRWTGVPLHKVSMDESRKLL 608
Query: 369 KMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAA 428
K+EE LH+RV+GQ EAV A+SRAIRRAR+GLK+P RP+AS +F+GPTGVGKSELAKALAA
Sbjct: 609 KLEEALHRRVVGQGEAVAAVSRAIRRARLGLKHPGRPVASLVFAGPTGVGKSELAKALAA 668
Query: 429 YYFGSEE----AMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLF 484
YY+GS E AM+RLDMSE+ME+H V++L+GSPPGYV + EGGQLTEAVRRRP+ VVL
Sbjct: 669 YYYGSSESEEAAMVRLDMSEYMEKHAVARLVGSPPGYVWHGEGGQLTEAVRRRPHAVVLL 728
Query: 485 DEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDL 544
DE+EKAH DVF+++LQ+L+DGRLTD KGRTVDFKNTL++MT+N+GSS+I
Sbjct: 729 DEVEKAHRDVFDLLLQVLDDGRLTDGKGRTVDFKNTLIVMTTNIGSSLIVN--------- 779
Query: 545 DYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDR 604
+ + ++ RIK+ VT+E+K++FRPEFLNRLDE+I+F+ LT+LEV +IA IML+E R
Sbjct: 780 NGGDGAAAAGRIKNTVTDEMKRHFRPEFLNRLDEVIMFQPLTELEVGKIAGIMLEEFAGR 839
Query: 605 LKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVI 664
++ K I+L+VT++FRE VVEEG++PSYGARPLRRA++RLLED++AEKMLA E++EGDSVI
Sbjct: 840 VREKGIKLKVTDKFRELVVEEGFDPSYGARPLRRAVVRLLEDTLAEKMLAGEVREGDSVI 899
Query: 665 VDVDSDGNVTV 675
VD DS GN V
Sbjct: 900 VDADSAGNAVV 910
>gi|254416553|ref|ZP_05030305.1| ATPase, AAA family [Coleofasciculus chthonoplastes PCC 7420]
gi|196176757|gb|EDX71769.1| ATPase, AAA family [Coleofasciculus chthonoplastes PCC 7420]
Length = 827
Score = 929 bits (2402), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 462/691 (66%), Positives = 569/691 (82%), Gaps = 11/691 (1%)
Query: 2 VGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRR 61
V + A G G +K TLEE+G NLT+LA EGKLDPVVGR +IER++QILGRR
Sbjct: 145 VAAAATARGPGTSMMGRTSKSATLEEFGRNLTQLASEGKLDPVVGRVKEIERIIQILGRR 204
Query: 62 TKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEE 121
TKNNP L+GEPGVGKTAIAEGLAQRI+ VP+ +E K+VI+LD+G L++GT++RG+FEE
Sbjct: 205 TKNNPVLLGEPGVGKTAIAEGLAQRISDSQVPELLENKQVISLDIGSLISGTRFRGDFEE 264
Query: 122 RLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDE 181
R+K +M E++++ IIL IDE+HTL+GAGA EG +DAANILKP+LARGELQC+GATTLDE
Sbjct: 265 RIKNIMAEVREAGNIILVIDEIHTLVGAGALEGGLDAANILKPALARGELQCVGATTLDE 324
Query: 182 YRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSY 241
YRKHIE+D ALERRFQP+ V EPSV+ETI+IL+GLR+ YE HH++ +D AL +AA+LS
Sbjct: 325 YRKHIERDAALERRFQPIMVGEPSVEETIEILQGLRDAYEQHHRVEISDHALDAAAKLSD 384
Query: 242 QYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKA 301
+YISDRFLPDKAIDLIDEAGSRV L H Q R++++++RQ+TKEK EAVR QDFEKA
Sbjct: 385 RYISDRFLPDKAIDLIDEAGSRVHLIHCQPSPATRDIKRQMRQVTKEKEEAVRLQDFEKA 444
Query: 302 GELRDREMDLKAQISALVDKGKEMSKAETEAGD--VGPVVTEVDIQHIVSAWTGIPVEKV 359
+LRDRE +L+ Q+ A++ +AET+ P+V E DI HIVS+WTG+PV K+
Sbjct: 445 AQLRDREQELETQLQAIL-------QAETDEDTPVQTPLVNEEDIAHIVSSWTGVPVNKL 497
Query: 360 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 419
+ ES LL +E+TLH+R+IGQ+EAV A+S+AIRRARVGLK+PNRPIASFIFSGPTGVGK
Sbjct: 498 TESESALLLHIEDTLHQRLIGQEEAVTAVSKAIRRARVGLKDPNRPIASFIFSGPTGVGK 557
Query: 420 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 479
+ELAKALAAY+FGSEEAMIRLDMSE+M+ HTVSKLIGSPPG+VGY EGGQLTEAVRR+PY
Sbjct: 558 TELAKALAAYFFGSEEAMIRLDMSEYMDPHTVSKLIGSPPGFVGYDEGGQLTEAVRRQPY 617
Query: 480 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 539
TV+LFDEIEKAHPDVFN +LQ+L+DGRLTD+KGRTVDFKNTL+IMTSN+GS VIEKGG
Sbjct: 618 TVLLFDEIEKAHPDVFNSLLQLLDDGRLTDAKGRTVDFKNTLIIMTSNIGSRVIEKGGGG 677
Query: 540 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 599
GF+ + +S YNRI+S V +ELK YFRPEFLNRLD++IVFRQL + E+K+IAD++L
Sbjct: 678 FGFEDSDNLAESQYNRIRSRVNDELKDYFRPEFLNRLDDIIVFRQLNRDEIKQIADLLLV 737
Query: 600 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 659
EV RL + I L+VTERF++R+VEEGY+PSYGARPLRR IMRLLEDS+AE MLA EI E
Sbjct: 738 EVSTRLVEQGITLEVTERFKDRLVEEGYDPSYGARPLRRTIMRLLEDSLAEAMLASEILE 797
Query: 660 GDSVIVDVDSDGNVTVLNGSSGAPESLADPL 690
G++ +VDVD +G V VL G S P L P+
Sbjct: 798 GETAVVDVDENGEVKVLPGES--PARLLQPV 826
>gi|427715740|ref|YP_007063734.1| ATPase [Calothrix sp. PCC 7507]
gi|427348176|gb|AFY30900.1| ATPase AAA-2 domain protein [Calothrix sp. PCC 7507]
Length = 815
Score = 927 bits (2397), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 455/662 (68%), Positives = 559/662 (84%), Gaps = 11/662 (1%)
Query: 14 GGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPG 73
GGG + +LEE+G NLTKLA+EG+LDPVVGR+ +IER +QILGRRTKNNP LIGEPG
Sbjct: 151 GGGQRRTQTLSLEEFGRNLTKLAQEGRLDPVVGREKEIERTIQILGRRTKNNPVLIGEPG 210
Query: 74 VGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQS 133
VGKTAIAEGLAQRI + DVP+ + K+VI+LDMG LVAGT++RG+FEERLKK+MEEI+
Sbjct: 211 VGKTAIAEGLAQRIINQDVPEVLLNKQVISLDMGSLVAGTRFRGDFEERLKKVMEEIRSV 270
Query: 134 DEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALE 193
IIL IDEVHTL+GAG EG +DAANILKP+LARGELQCIGATTL+EYR+HIE+D ALE
Sbjct: 271 GNIILVIDEVHTLVGAGGTEGGLDAANILKPALARGELQCIGATTLNEYRQHIERDAALE 330
Query: 194 RRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKA 253
RRFQP+ V EPSV ET+QIL GLR YE HHK+ +D A+++AA+LS +YISDRFLPDKA
Sbjct: 331 RRFQPILVGEPSVAETVQILYGLRSAYEQHHKVHISDAAVLAAAELSDRYISDRFLPDKA 390
Query: 254 IDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKA 313
IDLIDEAGSRV LR++Q+ +EL++EL ++K K+EAVR QDF KAG+LR++E+ L +
Sbjct: 391 IDLIDEAGSRVHLRNSQISSN-KELKRELTGVSKSKDEAVRLQDFGKAGKLRNQELQLTS 449
Query: 314 QISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEET 373
Q+ + + ++ P+V E DI IV++WTG+PV K++ ES+ LL +E+T
Sbjct: 450 QLHPELQNDQNVNI---------PIVDEEDIAQIVASWTGVPVNKLTESESELLLHLEDT 500
Query: 374 LHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGS 433
LHKR+IGQ++AV A+SRAIRRARVGLKNPNRPIASFIFSGPTGVGK+ELAKALAAY+FG+
Sbjct: 501 LHKRLIGQEQAVTAVSRAIRRARVGLKNPNRPIASFIFSGPTGVGKTELAKALAAYFFGA 560
Query: 434 EEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPD 493
E++MIRLDMSE+ME HTVSKLIGSPPGYVGY +GGQLTEAVRR+PY+V+LFDEIEKAHPD
Sbjct: 561 EDSMIRLDMSEYMEGHTVSKLIGSPPGYVGYDDGGQLTEAVRRKPYSVLLFDEIEKAHPD 620
Query: 494 VFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSY 553
VFNM+LQ+L+DG LTD+KGR VDFKNTL+I+TSN+GS VIEKGG +GFD D ++ D+SY
Sbjct: 621 VFNMLLQLLDDGHLTDAKGRKVDFKNTLIILTSNIGSKVIEKGGGGLGFDFD-NQADASY 679
Query: 554 NRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQ 613
NRI++LV EELK YFRPEFLNRLD++IVF QL+K EVK+I++I+L+EV RL + I L+
Sbjct: 680 NRIRTLVNEELKAYFRPEFLNRLDDIIVFTQLSKDEVKQISEILLREVSSRLTERGITLE 739
Query: 614 VTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNV 673
VTERF+ERVV+EGYNPSYGARPLRRAIMRLLEDS+AE +LA +I GD+ IVDVD DG V
Sbjct: 740 VTERFKERVVQEGYNPSYGARPLRRAIMRLLEDSLAEALLAGQITNGDTAIVDVDDDGQV 799
Query: 674 TV 675
V
Sbjct: 800 RV 801
>gi|119511432|ref|ZP_01630543.1| UvrB/UvrC protein [Nodularia spumigena CCY9414]
gi|119463897|gb|EAW44823.1| UvrB/UvrC protein [Nodularia spumigena CCY9414]
Length = 817
Score = 926 bits (2393), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 452/667 (67%), Positives = 556/667 (83%), Gaps = 11/667 (1%)
Query: 9 VGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCL 68
V A G S ++ TLEE+G NLTKLA+EGKLDPVVGR +IER +QILGRRTKNNP L
Sbjct: 148 VFASTGSSSKRSQSVTLEEFGRNLTKLAQEGKLDPVVGRAKEIERTIQILGRRTKNNPVL 207
Query: 69 IGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLME 128
IGEPGVGKTAIAEGLAQRI + D P+ + K+VI+LDMG++V+GT++RG+FEERLKK++E
Sbjct: 208 IGEPGVGKTAIAEGLAQRIVNQDAPEILLDKQVISLDMGMVVSGTRFRGDFEERLKKIVE 267
Query: 129 EIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEK 188
E++ + IIL IDEVHTL+GAG EG +DAANILKP+LARGELQCIGATTL+EYR+HIE+
Sbjct: 268 EVRSAGNIILVIDEVHTLVGAGGTEGGLDAANILKPALARGELQCIGATTLNEYRQHIER 327
Query: 189 DPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRF 248
D ALERRFQ + + EPSV+ET++IL GLR YE HHK+ +D+A+++AA+LS +YISDRF
Sbjct: 328 DAALERRFQSILIGEPSVEETVEILYGLRGAYEQHHKVHISDQAVLAAAELSDRYISDRF 387
Query: 249 LPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDRE 308
LPDKAIDLIDEAGSRVRLR++++ +EL+K+L ++K K EAVR Q+F KAGELRD E
Sbjct: 388 LPDKAIDLIDEAGSRVRLRNSRISTN-KELKKQLVGVSKAKQEAVRVQNFGKAGELRDEE 446
Query: 309 MDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLL 368
M L+A + A +A+ E P+V E DI IV++WTG+PV K++ ES+ LL
Sbjct: 447 MKLEADLQA---------EAQNEDFVKSPIVDEEDIAQIVASWTGVPVNKLTESESELLL 497
Query: 369 KMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAA 428
+E+TLH+R+IGQ++AV A+SRAIRRARVGLKNPNRPIASFIFSGPTGVGK+ELAK+LA+
Sbjct: 498 HLEDTLHERLIGQEQAVTAVSRAIRRARVGLKNPNRPIASFIFSGPTGVGKTELAKSLAS 557
Query: 429 YYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIE 488
Y+F SEEAMIRLDMSE+ME HTVSKLIGSPPGYVGY +GGQLTEAVRR+PY+V+LFDEIE
Sbjct: 558 YFFSSEEAMIRLDMSEYMEGHTVSKLIGSPPGYVGYDDGGQLTEAVRRKPYSVILFDEIE 617
Query: 489 KAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDE 548
KAHPDVFNM+LQ+L+DG LTD+KGR VDFKNTL+I+TSN+GS VIEKGG +GFD +
Sbjct: 618 KAHPDVFNMLLQLLDDGHLTDAKGRKVDFKNTLIILTSNIGSKVIEKGGGGLGFDFE-TA 676
Query: 549 KDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTK 608
D+SYNRI++LV EELK YFRPEFLNRLD++IVF QL K EVK+IADIML+E+ RL K
Sbjct: 677 ADASYNRIRTLVNEELKAYFRPEFLNRLDDIIVFTQLAKDEVKQIADIMLREIASRLTEK 736
Query: 609 DIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVD 668
I L+VTERF+ERVVEEGYNPSYGARPLRRAIMRLLED +AE ML+ ++ EG + I D+D
Sbjct: 737 GITLEVTERFKERVVEEGYNPSYGARPLRRAIMRLLEDPLAEAMLSGQVTEGVTAIADID 796
Query: 669 SDGNVTV 675
D VT+
Sbjct: 797 DDNQVTI 803
>gi|427708390|ref|YP_007050767.1| ATPase [Nostoc sp. PCC 7107]
gi|427360895|gb|AFY43617.1| ATPase AAA-2 domain protein [Nostoc sp. PCC 7107]
Length = 813
Score = 926 bits (2392), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 464/669 (69%), Positives = 562/669 (84%), Gaps = 18/669 (2%)
Query: 10 GAGVGGGSS---GNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNP 66
G GG+S + TLEE+G NL+KLA+EGKLDPVVGR+ +IER +QILGRRTKNNP
Sbjct: 146 GNVTAGGNSPRRNQQALTLEEFGRNLSKLAQEGKLDPVVGREKEIERAIQILGRRTKNNP 205
Query: 67 CLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKL 126
LIGEPGVGKTAIAEGLAQRI + DVP+ + K+VI+LDMGL+VAGT++RG+FEERLKK+
Sbjct: 206 VLIGEPGVGKTAIAEGLAQRIVNQDVPELLLNKQVISLDMGLVVAGTRFRGDFEERLKKI 265
Query: 127 MEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHI 186
M+EI+ I+L IDE+HTL+GAG EG +DAANILKP+LARGELQC+GATTLDEYRKHI
Sbjct: 266 MDEIRSVGNIVLVIDEIHTLVGAGGTEGGLDAANILKPALARGELQCLGATTLDEYRKHI 325
Query: 187 EKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISD 246
E+D ALERRFQP+ V EPSV+ETIQIL GLR YE HHK+ TD A+++AAQLS +YISD
Sbjct: 326 ERDAALERRFQPILVGEPSVEETIQILYGLRGAYEQHHKVEITDAAVLAAAQLSDRYISD 385
Query: 247 RFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRD 306
RFLPDKAIDLIDEAGSRVRLR++Q+ +EL+++L +TK K+EAVR QDF+KAGELRD
Sbjct: 386 RFLPDKAIDLIDEAGSRVRLRNSQISAN-KELKRQLVSVTKAKHEAVRLQDFDKAGELRD 444
Query: 307 REMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDR 366
+E++++AQ+ TE P V E DI IV++WTG+PV K++ ES+
Sbjct: 445 QELEIEAQL-------------HTEQTISIPTVGEEDIAQIVASWTGVPVNKLTESESEL 491
Query: 367 LLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKAL 426
LL +E+TLH+R+IGQ++AV ++SRAIRRARVGLKNPNRPIASFIFSGPTGVGK+ELAKAL
Sbjct: 492 LLHLEDTLHQRLIGQEQAVTSVSRAIRRARVGLKNPNRPIASFIFSGPTGVGKTELAKAL 551
Query: 427 AAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDE 486
AAY+FG+EEAMIRLDMSEFME HTVSKLIGSPPGYVGY EGGQLTEAVRR+PYTV+LFDE
Sbjct: 552 AAYFFGAEEAMIRLDMSEFMESHTVSKLIGSPPGYVGYDEGGQLTEAVRRKPYTVLLFDE 611
Query: 487 IEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDY 546
IEKAHPDVFNM+LQIL+DG+LTD+KGR VDFKNTL+I+TSN+GS VIEKGG +GF+ D
Sbjct: 612 IEKAHPDVFNMLLQILDDGQLTDAKGRRVDFKNTLIILTSNIGSKVIEKGGGGLGFEFD- 670
Query: 547 DEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLK 606
++ ++SY+RI++LV EELK YFRPEFLNRLDE+IVF QL+K EVKEIA+IML++V +RL
Sbjct: 671 NQAEASYHRIRNLVNEELKTYFRPEFLNRLDEIIVFTQLSKDEVKEIAEIMLRDVANRLT 730
Query: 607 TKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVD 666
K I L+VTE F+E VV EGYNPSYGARPLRRAIMRLLEDS+AE +L+ EI GD+ I D
Sbjct: 731 EKGITLEVTEAFKELVVNEGYNPSYGARPLRRAIMRLLEDSLAEALLSGEISNGDAAIAD 790
Query: 667 VDSDGNVTV 675
VD DG V +
Sbjct: 791 VDDDGQVKI 799
>gi|434403529|ref|YP_007146414.1| ATPase with chaperone activity, ATP-binding subunit
[Cylindrospermum stagnale PCC 7417]
gi|428257784|gb|AFZ23734.1| ATPase with chaperone activity, ATP-binding subunit
[Cylindrospermum stagnale PCC 7417]
Length = 817
Score = 926 bits (2392), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 451/664 (67%), Positives = 558/664 (84%), Gaps = 11/664 (1%)
Query: 13 VGGGSSG-NKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGE 71
VGG S N+ T+EE+G NLTKLA+EGKLDPVVGR +IER +QILGRRTKNNP LIGE
Sbjct: 150 VGGNSQKRNQKLTIEEFGRNLTKLAQEGKLDPVVGRGKEIERTIQILGRRTKNNPVLIGE 209
Query: 72 PGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIK 131
PGVGKTAIAEG+AQRI + D P+ + K+VI+LDMG LV+GT++RG+FEERLKK+M+EI+
Sbjct: 210 PGVGKTAIAEGIAQRIVNQDAPEILLNKQVISLDMGSLVSGTRFRGDFEERLKKIMDEIR 269
Query: 132 QSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPA 191
IIL IDEVHTL+GAG EG +DAANILKP+LARGELQCIGATTL EYR+HIE+D A
Sbjct: 270 SVGNIILVIDEVHTLVGAGGTEGGLDAANILKPALARGELQCIGATTLKEYRQHIERDAA 329
Query: 192 LERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPD 251
LERRFQP+ V EPS++ET+QIL GLR YE HHK+ +D A+++AA+LS +YISDRFLPD
Sbjct: 330 LERRFQPILVGEPSIEETVQILYGLRSAYEQHHKVHISDAAILAAAELSERYISDRFLPD 389
Query: 252 KAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDL 311
KAIDLIDEAGSRV LR+++ +EL++EL +TK K +A+R QDF KA +LR +E++L
Sbjct: 390 KAIDLIDEAGSRVHLRNSR-SSTNKELKRELISVTKSKEDAIRVQDFGKAVKLRGQELEL 448
Query: 312 KAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKME 371
+ Q+ A ++ET+ P+V E DI IV++WTG+PV K++ ES+ LL +E
Sbjct: 449 QTQLHA---------ESETDKTVTIPIVGEEDIAQIVASWTGVPVNKLTESESELLLHLE 499
Query: 372 ETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYF 431
+TLH+R+IGQ++AV ++SRAIRRARVGLKNPNRPIASFIFSGPTGVGK+ELAKALAAY+F
Sbjct: 500 DTLHQRLIGQEQAVTSVSRAIRRARVGLKNPNRPIASFIFSGPTGVGKTELAKALAAYFF 559
Query: 432 GSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAH 491
GSEEAMIRLDMSEFME HTVSKLIGSPPGYVGY +GGQLTEAVRR+PY+V+LFDEIEKAH
Sbjct: 560 GSEEAMIRLDMSEFMESHTVSKLIGSPPGYVGYDDGGQLTEAVRRKPYSVLLFDEIEKAH 619
Query: 492 PDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDS 551
PDVFNM+LQIL+DG+LTD+KGR VDFKNTL+I+TSN+GS VIEKGG +GF+ ++ ++
Sbjct: 620 PDVFNMLLQILDDGQLTDAKGRKVDFKNTLIILTSNIGSKVIEKGGSGLGFEFADNQSEA 679
Query: 552 SYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIE 611
SYNRI++LV EELK YFRPEFLNRLDE+IVF QL K EVK+IA+IML +V RL + I+
Sbjct: 680 SYNRIRTLVNEELKAYFRPEFLNRLDEIIVFTQLGKDEVKQIAEIMLLDVAGRLTERGIK 739
Query: 612 LQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDG 671
L+V++RF+ERVV+EGYNPSYGARPLRRAIMRLLEDS+AE +L+ +I +GD+ IVD+D DG
Sbjct: 740 LEVSDRFKERVVQEGYNPSYGARPLRRAIMRLLEDSLAEALLSGQIADGDTAIVDIDDDG 799
Query: 672 NVTV 675
V V
Sbjct: 800 QVRV 803
>gi|119488402|ref|ZP_01621575.1| ATP-dependent Clp protease regulatory subunit [Lyngbya sp. PCC
8106]
gi|119455213|gb|EAW36353.1| ATP-dependent Clp protease regulatory subunit [Lyngbya sp. PCC
8106]
Length = 828
Score = 924 bits (2387), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 462/663 (69%), Positives = 560/663 (84%), Gaps = 7/663 (1%)
Query: 14 GGGSSGNKMP-TLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEP 72
GG +SGNK TL+E+GTNL+KLA EGKLDPVVGR+ +IERV+QILGRRTKNNP L+GEP
Sbjct: 153 GGRASGNKRTVTLDEFGTNLSKLAAEGKLDPVVGREREIERVIQILGRRTKNNPVLVGEP 212
Query: 73 GVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQ 132
GVGKTAIAEGLAQRI D+P+ + K+V +LDMG LVAGT++RGEFEERLKK++EEI+
Sbjct: 213 GVGKTAIAEGLAQRIVQEDIPELLADKQVFSLDMGSLVAGTRFRGEFEERLKKIVEEIRS 272
Query: 133 SDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPAL 192
IIL IDE+HT++GAGA EG++DAAN+LKP+LARGELQC+GATTLDEYRKHIE+D AL
Sbjct: 273 CGNIILVIDEIHTIVGAGAIEGSMDAANMLKPALARGELQCLGATTLDEYRKHIERDAAL 332
Query: 193 ERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDK 252
ERRFQPV V EPSV++T++IL GLR YE HH+L TD+A+ +AA LS +YISDRFLPDK
Sbjct: 333 ERRFQPVMVGEPSVEDTVEILFGLRSAYEQHHRLTITDQAVYAAATLSDRYISDRFLPDK 392
Query: 253 AIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLK 312
AIDLIDEAGSRVR+ +++ E +EL++EL I +EK E V+ QDFEKAGELRDRE++LK
Sbjct: 393 AIDLIDEAGSRVRVMNSKPSPETQELKRELSDIIREKEETVKKQDFEKAGELRDREIELK 452
Query: 313 AQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEE 372
+I A V GKE SKA + +V E DI +++AWT IPV K++ ES +LL MEE
Sbjct: 453 EKIEA-VTTGKETSKAPLQL-----MVGEEDIAEVLAAWTSIPVSKLTESESQKLLHMEE 506
Query: 373 TLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFG 432
TLH+R+IGQDEAV A+SRAIRRARVGLKNPNRPIASFIFSGPTGVGK+EL KALAAY+FG
Sbjct: 507 TLHQRLIGQDEAVSAVSRAIRRARVGLKNPNRPIASFIFSGPTGVGKTELTKALAAYFFG 566
Query: 433 SEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHP 492
SEEAMIRLDMSEFMERHTVSKLIGSPPGYVG+ EGGQLTEAVRRRPYTVVLFDEIEKAHP
Sbjct: 567 SEEAMIRLDMSEFMERHTVSKLIGSPPGYVGFDEGGQLTEAVRRRPYTVVLFDEIEKAHP 626
Query: 493 DVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSS 552
DVFNM+LQILEDGRLTD+KGRTV FKNTLLIMTSN+GS VIEKGG +GF+L +D
Sbjct: 627 DVFNMLLQILEDGRLTDAKGRTVSFKNTLLIMTSNIGSKVIEKGGGGLGFELGEPGEDLQ 686
Query: 553 YNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIEL 612
Y RI++LV EELKQ+FRPEFLNRLDE+IVFRQL + EV+ IAD+ML+EVF RL+ K + +
Sbjct: 687 YTRIRNLVNEELKQFFRPEFLNRLDEIIVFRQLEREEVRHIADLMLQEVFRRLREKGMTI 746
Query: 613 QVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGN 672
+V+++F+E ++E GY+ +YGARP+RRA+M LLED++AE ML+ + EG+ +VD+D +G
Sbjct: 747 EVSDKFKEHLIEVGYDRNYGARPMRRAVMSLLEDALAEAMLSGLLTEGNHALVDMDEEGK 806
Query: 673 VTV 675
V V
Sbjct: 807 VKV 809
>gi|298490318|ref|YP_003720495.1| ATPase AAA-2 domain-containing protein ['Nostoc azollae' 0708]
gi|298232236|gb|ADI63372.1| ATPase AAA-2 domain protein ['Nostoc azollae' 0708]
Length = 815
Score = 920 bits (2377), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 454/667 (68%), Positives = 551/667 (82%), Gaps = 13/667 (1%)
Query: 9 VGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCL 68
V AG GS N+ ++EE+G NLTK+A++GKLDPVVGRQ +IER VQILGRRTKNNP L
Sbjct: 148 VFAGTVSGSKRNQNLSIEEFGRNLTKMAQDGKLDPVVGRQREIERTVQILGRRTKNNPVL 207
Query: 69 IGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLME 128
IGEPGVGKTAIAEGLAQRI + DVP+ + K+VI+LDMGLLVAGT++RG+FEERLKK+M+
Sbjct: 208 IGEPGVGKTAIAEGLAQRIINQDVPEVLLNKQVISLDMGLLVAGTRFRGDFEERLKKIMD 267
Query: 129 EIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEK 188
EI+ IIL IDE+HTL+GAG EG +DAANILKP+LARGELQCIGATTLDEYRKHIE+
Sbjct: 268 EIRSEGNIILVIDEIHTLVGAGGTEGGLDAANILKPALARGELQCIGATTLDEYRKHIER 327
Query: 189 DPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRF 248
D ALERRFQP+ V EPSV ETI+IL GLR YE HHK+ +D A+V AAQLS +YISDRF
Sbjct: 328 DAALERRFQPILVGEPSVGETIEILYGLRSAYEQHHKVTISDAAVVVAAQLSDRYISDRF 387
Query: 249 LPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDRE 308
LPDKAIDLIDEAGSRVRLRH+++ +E++ +L+ I+K+K EA+R QDF KA +L E
Sbjct: 388 LPDKAIDLIDEAGSRVRLRHSRIINN-KEIKLQLKNISKDKAEAIRVQDFGKASKLNQEE 446
Query: 309 MDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLL 368
++L+A+I E V +V E DI IV++WTG+PV K++ ES+ LL
Sbjct: 447 LELQAKID-----------LEDNLQTVKAIVDEEDIAQIVASWTGVPVNKLTESESELLL 495
Query: 369 KMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAA 428
+E+TLHKR+IGQ++AV A+SR+IRRARVGLKNP RPIASFIFSGPTGVGK+ELAKALAA
Sbjct: 496 HLEDTLHKRLIGQEQAVAAVSRSIRRARVGLKNPKRPIASFIFSGPTGVGKTELAKALAA 555
Query: 429 YYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIE 488
Y+FG+ ++MIRLDMSE+ME H VSKLIGSPPGYVGY EGGQLTEAVRR+PYTV+LFDEIE
Sbjct: 556 YFFGAGDSMIRLDMSEYMESHNVSKLIGSPPGYVGYDEGGQLTEAVRRKPYTVLLFDEIE 615
Query: 489 KAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDE 548
KAH DVFNM+LQIL++G LTD+KGR VDFKNTL+I+TSN+GS VIEKGG +GF+ D ++
Sbjct: 616 KAHSDVFNMLLQILDEGHLTDAKGRKVDFKNTLIILTSNIGSKVIEKGGISLGFEFD-NQ 674
Query: 549 KDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTK 608
D+SYN I+ LV EELK YFRPEFLNR+D++IVF QL K EVK+IA+IML +V +RLK +
Sbjct: 675 ADASYNGIRKLVNEELKAYFRPEFLNRVDDIIVFTQLNKEEVKQIAEIMLHDVANRLKDR 734
Query: 609 DIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVD 668
I+L+VTE F+E VV EGY+PSYGARPLRRAIMRLLEDS+AE +L+ I EGD+ IVDVD
Sbjct: 735 GIKLEVTESFKELVVREGYDPSYGARPLRRAIMRLLEDSLAEAILSSHILEGDTAIVDVD 794
Query: 669 SDGNVTV 675
DG VTV
Sbjct: 795 DDGQVTV 801
>gi|282898552|ref|ZP_06306540.1| UvrB/UvrC protein [Cylindrospermopsis raciborskii CS-505]
gi|281196420|gb|EFA71329.1| UvrB/UvrC protein [Cylindrospermopsis raciborskii CS-505]
Length = 817
Score = 918 bits (2372), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 454/675 (67%), Positives = 561/675 (83%), Gaps = 13/675 (1%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
++GE V AG N+ ++EE+G NLTKLA++G+LDPVVGRQ +IER VQILGR
Sbjct: 141 ILGEDNRVV-AGRQDNPRRNQNLSIEEFGRNLTKLAQQGRLDPVVGRQTEIERTVQILGR 199
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNP LIGEPGVGKTAIAEGLAQRI + DVP+ + K+VI+LDMGLLVAGT++RG+FE
Sbjct: 200 RTKNNPVLIGEPGVGKTAIAEGLAQRIVNQDVPEILLNKQVISLDMGLLVAGTRFRGDFE 259
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
ERLKK+MEEI+ IIL IDE+HT++GAG EG +DAANILKP+LARGELQCIGATTLD
Sbjct: 260 ERLKKVMEEIRSVGNIILVIDEIHTIVGAGGTEGGLDAANILKPALARGELQCIGATTLD 319
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRK+IE+D ALERRFQP+ V EPSV ETI+IL GLR YE HHK+ +D+A+++AA+LS
Sbjct: 320 EYRKYIERDAALERRFQPILVGEPSVAETIEILGGLRSAYEQHHKVTISDDAVIAAAELS 379
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
+YISDRFLPDKAIDLIDEAGSRVRLRH+++ + +EL+++L+ ++EK EAVR QDF K
Sbjct: 380 DRYISDRFLPDKAIDLIDEAGSRVRLRHSRIIDN-KELKQQLKNTSQEKAEAVRVQDFGK 438
Query: 301 AGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVS 360
A +LR E+DL+ Q++ + + K P V E DI IV++WTG+PV K++
Sbjct: 439 ASKLRQEELDLQTQLAI----AQNLPKITI------PQVDEEDIAEIVASWTGVPVNKLT 488
Query: 361 TDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 420
ES+ LL +E+TLHKR+IGQ++AV A+SR++RRARVGLK+PNRPIASFIFSGPTGVGK+
Sbjct: 489 ESESELLLHLEDTLHKRLIGQEQAVTAVSRSLRRARVGLKSPNRPIASFIFSGPTGVGKT 548
Query: 421 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 480
ELAKALA Y+FG+E++MIRLDMSE+ME H VSKLIGSPPGYVGY EGGQLTEAVRR+PYT
Sbjct: 549 ELAKALATYFFGAEDSMIRLDMSEYMESHNVSKLIGSPPGYVGYDEGGQLTEAVRRKPYT 608
Query: 481 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI 540
++LFDEIEKAHPDVFNM+LQIL+DG LTD+KGR VDFKNTL+I+TSN+GS VIEKGG +
Sbjct: 609 LLLFDEIEKAHPDVFNMLLQILDDGHLTDAKGRKVDFKNTLIILTSNIGSKVIEKGGMSL 668
Query: 541 GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 600
GF+ D ++ ++SYNRI++LV EELK YFRPEFLNR+DE+IVF QL K EVKEI+ IML+E
Sbjct: 669 GFEFD-NQANASYNRIRNLVNEELKSYFRPEFLNRVDEIIVFSQLNKDEVKEISQIMLEE 727
Query: 601 VFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEG 660
V RL+ K I+L+VTE F++ VV EGY+PSYGARPLRRAIMRLLEDS+AE +L+ EI+EG
Sbjct: 728 VAKRLQEKGIKLEVTEAFKDLVVTEGYDPSYGARPLRRAIMRLLEDSLAEVILSGEIREG 787
Query: 661 DSVIVDVDSDGNVTV 675
D IVDVD DG V V
Sbjct: 788 DQAIVDVDDDGLVKV 802
>gi|282896226|ref|ZP_06304249.1| Probable ATP-dependent Clp protease ATP-binding subunit
[Raphidiopsis brookii D9]
gi|281198915|gb|EFA73793.1| Probable ATP-dependent Clp protease ATP-binding subunit
[Raphidiopsis brookii D9]
Length = 709
Score = 918 bits (2372), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 453/675 (67%), Positives = 560/675 (82%), Gaps = 13/675 (1%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
++GE V AG N+ ++EE+G NLTKLA++G+LDPVVGRQ +IER VQILGR
Sbjct: 33 ILGEDNRVV-AGRQDNPRRNQNLSIEEFGRNLTKLAQQGRLDPVVGRQTEIERTVQILGR 91
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNP LIGEPGVGKTAIAEGLAQRI + DVP+ + K+VI+LDMGLLVAGT++RG+FE
Sbjct: 92 RTKNNPVLIGEPGVGKTAIAEGLAQRIVNQDVPEILLNKQVISLDMGLLVAGTRFRGDFE 151
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
ERLKK+ME+I+ IIL IDE+HT++GAG EG +DAANILKP+LARGELQCIGATTLD
Sbjct: 152 ERLKKVMEDIRSVGNIILVIDEIHTIVGAGGTEGGLDAANILKPALARGELQCIGATTLD 211
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRK+IE+D ALERRFQP+ V EPSV ETI+IL+GLR YE HHK+ +D+A+++AA+LS
Sbjct: 212 EYRKYIERDAALERRFQPILVGEPSVAETIEILRGLRSAYEQHHKVNISDDAVIAAAELS 271
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
+YISDRFLPDKAIDLIDEAGSRVRLRH+++ + +EL+++L+ ++EK EAVR QDF K
Sbjct: 272 DRYISDRFLPDKAIDLIDEAGSRVRLRHSRIIDN-KELKQQLKNTSQEKAEAVRVQDFGK 330
Query: 301 AGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVS 360
A +LR E+DL+ Q++ A+ P V E DI IVS+WTG+PV K++
Sbjct: 331 ASKLRQEELDLQTQLAI----------AQNLPRITIPQVDEEDIAEIVSSWTGVPVNKLT 380
Query: 361 TDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 420
ES+ LL +E+TLHKR+IGQ++AV A+SR++RRARVGLK+PNRPIASFIFSGPTGVGK+
Sbjct: 381 ESESELLLHLEDTLHKRLIGQEQAVTAVSRSLRRARVGLKSPNRPIASFIFSGPTGVGKT 440
Query: 421 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 480
ELAKALAAY+FG+E++MIRLDMSE+ME H VSKLIGSPPGYVGY EGGQLTEAVRR+PYT
Sbjct: 441 ELAKALAAYFFGAEDSMIRLDMSEYMESHNVSKLIGSPPGYVGYDEGGQLTEAVRRKPYT 500
Query: 481 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI 540
++LFDEIEKAHPDVFNM+LQIL+DG LTD+KGR VDFKNTL+I+TSN+GS +IEKGG +
Sbjct: 501 LLLFDEIEKAHPDVFNMLLQILDDGHLTDAKGRKVDFKNTLIILTSNIGSKLIEKGGMSL 560
Query: 541 GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 600
GF+ D ++ ++SYNRI++LV EELK YFRPEFLNR+DE+IVF QL K EVKEI+ IML+E
Sbjct: 561 GFEFD-NQANASYNRIRNLVNEELKSYFRPEFLNRVDEIIVFSQLNKDEVKEISQIMLEE 619
Query: 601 VFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEG 660
V RL+ K I+L+VTE F++ VV EGY+PSYGARPLRRAIMRLLEDS+AE +L+ EI E
Sbjct: 620 VAKRLQEKGIKLEVTEAFKDLVVTEGYDPSYGARPLRRAIMRLLEDSLAEAILSGEIGED 679
Query: 661 DSVIVDVDSDGNVTV 675
D IVDVD DG V V
Sbjct: 680 DQAIVDVDDDGLVKV 694
>gi|428305782|ref|YP_007142607.1| ATPase [Crinalium epipsammum PCC 9333]
gi|428247317|gb|AFZ13097.1| ATPase AAA-2 domain protein [Crinalium epipsammum PCC 9333]
Length = 815
Score = 917 bits (2369), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 443/658 (67%), Positives = 558/658 (84%), Gaps = 10/658 (1%)
Query: 18 SGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKT 77
S NK P L+E+GT+LT+LA +GKLDPVVGR+ +IER +QILGRRTKNNP LIGEPGVGKT
Sbjct: 157 SQNKTPILDEFGTDLTELAAKGKLDPVVGREREIERAIQILGRRTKNNPVLIGEPGVGKT 216
Query: 78 AIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEII 137
AIAEGLAQRI + +VP T+E K+VI+LDMG LVAGTK+RGEFEERLK ++EE++ S II
Sbjct: 217 AIAEGLAQRIINKNVPGTLEDKQVISLDMGSLVAGTKFRGEFEERLKGIVEEVRSSGNII 276
Query: 138 LFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQ 197
L IDE+H +IG G+ +G +DAAN+LKP+LARGELQCIG TTLDEYRKHIEKD ALERRFQ
Sbjct: 277 LVIDELHNIIGTGSVQGGLDAANMLKPALARGELQCIGMTTLDEYRKHIEKDAALERRFQ 336
Query: 198 PVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLI 257
P+KV EPSV ETI+IL GLRE YE HK++ +D+A+ +AA+LS QYISDRFLPDKAIDLI
Sbjct: 337 PIKVGEPSVVETIEILFGLREAYEQFHKVKISDDAIDAAAKLSDQYISDRFLPDKAIDLI 396
Query: 258 DEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISA 317
DEAGSR+R+++ P REL++ELRQ++K K EAV+ QDF++AG+LRD+E++L+ Q+
Sbjct: 397 DEAGSRLRVQNTMSPAH-RELKRELRQVSKAKQEAVQVQDFDQAGKLRDKELELEGQL-- 453
Query: 318 LVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKR 377
K+M+ ++ ++ D+ PVV I IV+ WTG+PV K++ ES +LL +E+TLH+R
Sbjct: 454 -----KKMATSQ-DSADI-PVVDAEKIAEIVAVWTGVPVSKLTESESAKLLDLEDTLHQR 506
Query: 378 VIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAM 437
+IGQD+AV A+S+AIRRARVGLK+PNRPIASFIFSGPTGVGK+ELAKALAA++FGSEEAM
Sbjct: 507 LIGQDQAVTAVSKAIRRARVGLKSPNRPIASFIFSGPTGVGKTELAKALAAHFFGSEEAM 566
Query: 438 IRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNM 497
IR+DMSE+ME HTVSKLIGSPPG+VGY EGGQLTEAVRRRPY+V+LFDEIEKAHPDVFNM
Sbjct: 567 IRVDMSEYMESHTVSKLIGSPPGFVGYDEGGQLTEAVRRRPYSVILFDEIEKAHPDVFNM 626
Query: 498 MLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIK 557
MLQ+L+DGRLTD++GRTVDFKNTL+I+TSN+GS VIEKGG +GF+ D+ +++YNR++
Sbjct: 627 MLQMLDDGRLTDAQGRTVDFKNTLIILTSNLGSKVIEKGGSGLGFEFSEDQAEATYNRMQ 686
Query: 558 SLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTER 617
V EELK YFRPEFLNRLD++IVFRQLT EV+ IA IML+EV RL ++I L+VT++
Sbjct: 687 QRVQEELKAYFRPEFLNRLDDIIVFRQLTFEEVRSIAGIMLREVASRLTEQEISLEVTDK 746
Query: 618 FRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTV 675
F++RVV+EG+NP +GAR LRRAIMRLLEDS+AE ML+ + GD+ ++DV DG V +
Sbjct: 747 FKDRVVKEGFNPKFGARELRRAIMRLLEDSLAEAMLSGTVNSGDTAVIDVGEDGEVEI 804
>gi|443309789|ref|ZP_21039475.1| ATPase with chaperone activity, ATP-binding subunit [Synechocystis
sp. PCC 7509]
gi|442780161|gb|ELR90368.1| ATPase with chaperone activity, ATP-binding subunit [Synechocystis
sp. PCC 7509]
Length = 822
Score = 912 bits (2356), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 450/669 (67%), Positives = 550/669 (82%), Gaps = 17/669 (2%)
Query: 2 VGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRR 61
VG + V + G +G K TLEE+GTNLTKLA EGKLDPVVGR +IER VQILGRR
Sbjct: 147 VGANRGNVQSSTSRGVAG-KTTTLEEFGTNLTKLAAEGKLDPVVGRDKEIERAVQILGRR 205
Query: 62 TKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEE 121
TKNNP LIGEPGVGKTAIAEGLAQRI ++PD +E K+V +LD+G LVAGT++RG+FEE
Sbjct: 206 TKNNPVLIGEPGVGKTAIAEGLAQRIVDKNIPDILEDKQVFSLDVGSLVAGTRHRGDFEE 265
Query: 122 RLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDE 181
R+K +MEEI+ + IIL IDEVH L+GAG+ +G +DAANILKP+LARGELQC+GATTL+E
Sbjct: 266 RIKTIMEEIRAAGNIILVIDEVHNLVGAGSVQGGMDAANILKPALARGELQCLGATTLNE 325
Query: 182 YRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSY 241
YR+HIE+D ALERRFQP+ V EPSV+ETI+IL GLR YE HHK++ +DEA+ +AA+LS
Sbjct: 326 YRQHIERDAALERRFQPIMVGEPSVEETIEILYGLRSVYEQHHKIKISDEAIFAAAKLSD 385
Query: 242 QYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKA 301
+YISDRFLPDKAIDLIDEAGSR L +Q E ++L++EL I+K+K +AV+ QDFE A
Sbjct: 386 RYISDRFLPDKAIDLIDEAGSRAHLASSQQSPEVKQLKQELDSISKDKEKAVKDQDFEVA 445
Query: 302 GELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEK 358
G+LRDRE+++ +I L + K+ VVT VD I HIV++WTGIP+ K
Sbjct: 446 GQLRDREIEVNEKIK-LASENKQ------------AVVTTVDEEAIAHIVASWTGIPLNK 492
Query: 359 VSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVG 418
++ ES LL +E+TLH+R+IGQ+EAV A+SRAIRRARVGLK+P+RPIASFIFSGPTGVG
Sbjct: 493 LTESESTVLLHLEDTLHQRIIGQEEAVTAVSRAIRRARVGLKSPDRPIASFIFSGPTGVG 552
Query: 419 KSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRP 478
K+EL+KALAAY+FGSEEAMIRLDMSE+MERHTVSKLIGSPPGYVGY EGGQLTEAVRR+P
Sbjct: 553 KTELSKALAAYFFGSEEAMIRLDMSEYMERHTVSKLIGSPPGYVGYDEGGQLTEAVRRKP 612
Query: 479 YTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR 538
Y+V+LFDEIEKAH DVFN++LQ+L+DGRLTD++GRTVDFKNTL+IMTSN+GS VIEKGG
Sbjct: 613 YSVILFDEIEKAHSDVFNLLLQLLDDGRLTDAQGRTVDFKNTLIIMTSNIGSKVIEKGGG 672
Query: 539 RIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIML 598
IGF+ + ++ YNRIK+LV EELK YFRPEFLNRLDE IVF QL K E+K+IADI+L
Sbjct: 673 GIGFEFADNGAETQYNRIKTLVNEELKNYFRPEFLNRLDETIVFTQLKKTEIKQIADILL 732
Query: 599 KEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIK 658
EV +RL + + L+VT+ F+E VVE+GY+PSYGARPLRRAIM LLEDS+AE ML +IK
Sbjct: 733 LEVANRLAEQGMTLEVTDSFKELVVEQGYSPSYGARPLRRAIMSLLEDSLAEAMLTGQIK 792
Query: 659 EGDSVIVDV 667
GD+ IVDV
Sbjct: 793 LGDNAIVDV 801
>gi|215400791|ref|YP_002327552.1| caseinolytic-like Clp protease [Vaucheria litorea]
gi|194441241|gb|ACF70969.1| caseinolytic-like Clp protease [Vaucheria litorea]
Length = 862
Score = 906 bits (2342), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 431/661 (65%), Positives = 548/661 (82%), Gaps = 6/661 (0%)
Query: 21 KMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIA 80
K PTLEE+ TNLT A +G LDPV+GR+ +IERV+QIL RR KNNP LIGEPGVGKTA+A
Sbjct: 187 KRPTLEEFTTNLTDAALKGNLDPVIGREKEIERVIQILSRRRKNNPILIGEPGVGKTAVA 246
Query: 81 EGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFI 140
EGLAQRI + P T+ KK+I LD+GLL+AGTKYRGEFEERLK+++EEI+ SD+II+ I
Sbjct: 247 EGLAQRIVQKEAPATLHDKKIIVLDVGLLLAGTKYRGEFEERLKRIVEEIQSSDDIIIVI 306
Query: 141 DEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVK 200
DEVHTLIGAGA+EGA+DAANILKP LARGELQCIGATTLDEYR+HIEKD ALERRFQPV+
Sbjct: 307 DEVHTLIGAGASEGALDAANILKPVLARGELQCIGATTLDEYRQHIEKDAALERRFQPVQ 366
Query: 201 VPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEA 260
V EPS+ ETI+ILKGLR+RYE HH+L + ALV+AA L QYI+DRFLPDKAIDLIDEA
Sbjct: 367 VDEPSITETIEILKGLRQRYEHHHQLTISTAALVAAANLGAQYIADRFLPDKAIDLIDEA 426
Query: 261 GSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVD 320
GSRVRL + +PE AREL+KELR+I + K++AVR Q+FEKAGELRDREM+ ++ I+A++
Sbjct: 427 GSRVRLNNYYVPESARELDKELREILQAKDDAVRAQNFEKAGELRDREMETRSMITAIIK 486
Query: 321 KGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIG 380
K + K P V E DI H+V AWTGIPV K++ +E+ +LL ME LH+RV+G
Sbjct: 487 SQKLIKKP---VNVEKPTVEEEDIAHVVGAWTGIPVNKITKNETAKLLDMENILHQRVVG 543
Query: 381 QDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRL 440
Q +AV A+SRAIRRARVGL+NPNRPIASF+F+GPTGVGK+EL KALA+Y+FGSE++MIRL
Sbjct: 544 QSQAVTAVSRAIRRARVGLRNPNRPIASFLFAGPTGVGKTELTKALASYFFGSEDSMIRL 603
Query: 441 DMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQ 500
DMSE+ME+HTV+KLIGSPPGY+GY EGGQLTEAVRR+PYTV+LFDE+EK HPD+FN++LQ
Sbjct: 604 DMSEYMEKHTVAKLIGSPPGYIGYNEGGQLTEAVRRKPYTVILFDEVEKGHPDIFNLLLQ 663
Query: 501 ILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR---RIGFDLDYDEKDSSYNRIK 557
ILEDGRLTDSKGR ++FKNT++IMTSN+GSS IE+ R +GFD + +++ Y+ +
Sbjct: 664 ILEDGRLTDSKGRVINFKNTIIIMTSNLGSSAIEQQSRLEEDLGFDAITNIEETRYSMLC 723
Query: 558 SLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTER 617
+LV EELK++FRPEFLNR+DEMIVF+QLTK E+++IA IM+ ++ R + + +EL+V+++
Sbjct: 724 NLVNEELKEFFRPEFLNRIDEMIVFQQLTKDEIEDIAKIMINDLVKRSEQQKLELEVSDK 783
Query: 618 FRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTVLN 677
+ +++EEGYNP+YGARPLRRA+MRL+ED++A K L ++ + VDV+ G + V
Sbjct: 784 VKNKLIEEGYNPAYGARPLRRAVMRLIEDNIASKFLEESPEDQVRIFVDVNEFGEIVVTL 843
Query: 678 G 678
G
Sbjct: 844 G 844
>gi|414079572|ref|YP_007000996.1| ATP-dependent Clp protease [Anabaena sp. 90]
gi|413972851|gb|AFW96939.1| ATP-dependent Clp protease [Anabaena sp. 90]
Length = 816
Score = 904 bits (2336), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 453/674 (67%), Positives = 561/674 (83%), Gaps = 13/674 (1%)
Query: 2 VGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRR 61
+GE T AV G S N+ ++E +G NLTKLA++G+LDPVVGRQ +IER VQILGRR
Sbjct: 142 LGEDT-AVVTGGRSNSQRNQNLSIEAFGRNLTKLAQDGRLDPVVGRQKEIERTVQILGRR 200
Query: 62 TKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEE 121
TKNNP LIGEPGVGKTAIAEGLAQRI + DVP+ + K+VI+LDMG +VAGT++RG+FEE
Sbjct: 201 TKNNPVLIGEPGVGKTAIAEGLAQRIVNQDVPEILLDKQVISLDMGSVVAGTRFRGDFEE 260
Query: 122 RLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDE 181
RLKK+MEE++ + IIL IDE+HTL+GAG EG +DAANILKP+LARGELQCIGATTLDE
Sbjct: 261 RLKKIMEEVRSAGNIILVIDEIHTLVGAGGTEGGLDAANILKPALARGELQCIGATTLDE 320
Query: 182 YRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSY 241
YR+HIE+D ALERRFQP+ V EPSV ETI IL GLR YE HH++ TDEA+V+AA+L+
Sbjct: 321 YRQHIERDAALERRFQPILVGEPSVAETIDILYGLRGAYEQHHRVNITDEAVVAAAELAD 380
Query: 242 QYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKA 301
+YISDRFLPDKAIDLIDEAGSRVRLRH+ + +EL++EL TK K+EA+R QDF KA
Sbjct: 381 RYISDRFLPDKAIDLIDEAGSRVRLRHSHIANN-KELKRELTTATKAKSEAIRVQDFSKA 439
Query: 302 GELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVST 361
G+LR +E++L+ ++ +++ +E A P+V E DI IV++WTG+PV K++
Sbjct: 440 GKLRIQELELQTRLD--LEENQETVNA--------PLVNEEDIAQIVASWTGVPVNKLTE 489
Query: 362 DESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSE 421
ES+ LL +E+TLH R+IGQ++AV ++SRAIRRARVGLK+PNRPIASFIFSGPTGVGK+E
Sbjct: 490 SESELLLHLEDTLHTRLIGQEQAVTSVSRAIRRARVGLKSPNRPIASFIFSGPTGVGKTE 549
Query: 422 LAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTV 481
LAKALAAY+FG EE+M+RLDMSE+ME H VSKLIGSPPGYVGY EGGQLTEAVRR+PYTV
Sbjct: 550 LAKALAAYFFGDEESMVRLDMSEYMESHNVSKLIGSPPGYVGYDEGGQLTEAVRRKPYTV 609
Query: 482 VLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIG 541
+LFDEIEKAHPDVFNM+LQIL+DG LTD+KGR VDFKNTL+I+TSN+GS VIEKGG +G
Sbjct: 610 LLFDEIEKAHPDVFNMLLQILDDGHLTDAKGRKVDFKNTLIILTSNIGSKVIEKGGSSLG 669
Query: 542 FDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEV 601
F+ D + ++SY+RI++LV EELK YFRPEFLNR+D++IVF QL K EVK+IA+IML++V
Sbjct: 670 FEFD-NAAEASYHRIRNLVNEELKAYFRPEFLNRVDDIIVFTQLNKDEVKQIAEIMLRDV 728
Query: 602 FDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGD 661
RLK K+I L+VTE F+E+VV+EGY+PSYGARPLRRAI+RLLEDS+ E +L+ EI +GD
Sbjct: 729 GSRLKEKNITLEVTEAFKEKVVQEGYDPSYGARPLRRAIVRLLEDSLVEAILSGEIADGD 788
Query: 662 SVIVDVDSDGNVTV 675
IVDVD DG V V
Sbjct: 789 KAIVDVDDDGQVKV 802
>gi|242624367|ref|YP_003002285.1| ATP-dependent clp protease ATP-binding subunit [Aureoumbra
lagunensis]
gi|239997475|gb|ACS36997.1| ATP-dependent clp protease ATP-binding subunit [Aureoumbra
lagunensis]
Length = 833
Score = 902 bits (2330), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 443/674 (65%), Positives = 554/674 (82%), Gaps = 15/674 (2%)
Query: 2 VGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRR 61
+GE+ E V G ++EE+ TNLT+ A GKLDPVVGR +IERV+QIL RR
Sbjct: 142 IGETLEVVLGGDRSEFFEMSGVSIEEFTTNLTEAAFNGKLDPVVGRDEEIERVIQILARR 201
Query: 62 TKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEE 121
KNNP LIGEPGVGKTA+AEGLAQRI DVPD ++ K+VI+LD+GLL+AGTKYRGEFEE
Sbjct: 202 RKNNPVLIGEPGVGKTAVAEGLAQRIVKRDVPDLLDEKQVISLDIGLLLAGTKYRGEFEE 261
Query: 122 RLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDE 181
RLK++++E++ S+ IIL IDEVHTLIGAGAAEGA+DAANILKP+LARGELQCIGATT+DE
Sbjct: 262 RLKRIIDEVRSSNNIILVIDEVHTLIGAGAAEGAVDAANILKPALARGELQCIGATTIDE 321
Query: 182 YRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSY 241
YRKHIE+D ALERRFQPV++ EPSV +T+QIL+ LR YE HH L+ +DEAL +AA +
Sbjct: 322 YRKHIERDSALERRFQPVQIDEPSVSDTVQILRCLRPSYERHHGLKISDEALEAAASMGA 381
Query: 242 QYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKA 301
QYI+DRFLPDKAIDLIDEAGSRVRL+ ++P+ A +L++ELR I KEK+ A+ Q+FE A
Sbjct: 382 QYIADRFLPDKAIDLIDEAGSRVRLKAVRMPDAASDLDRELRDIIKEKDTAIADQNFEVA 441
Query: 302 GELRDREMDLKAQISAL---VDK--GKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPV 356
DRE++L+AQ+SA+ VD+ G + K V PVVTE DI ++VSAWTGIPV
Sbjct: 442 ATALDRELELRAQLSAILATVDRIPGPAIKKM------VDPVVTEDDIANVVSAWTGIPV 495
Query: 357 EKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTG 416
K+S ES++LL MEETLH R+IGQ++AV A+SRAIRRARVGL+NPNRPIASF+FSGPTG
Sbjct: 496 NKISKSESEKLLHMEETLHSRIIGQEQAVSAVSRAIRRARVGLRNPNRPIASFLFSGPTG 555
Query: 417 VGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRR 476
VGK+EL KALA Y+FG+E+AM+RLDMSEFMERHTV+KLIGSPPGYVGY+EGGQLTEAVRR
Sbjct: 556 VGKTELTKALALYFFGAEDAMVRLDMSEFMERHTVAKLIGSPPGYVGYSEGGQLTEAVRR 615
Query: 477 RPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKG 536
+PYTVVLFDE+EKAHPDVFN++LQILEDGRLTDSKGRT+DFKNT+LI+TSN+G+ VI++
Sbjct: 616 KPYTVVLFDEVEKAHPDVFNLLLQILEDGRLTDSKGRTIDFKNTMLILTSNIGAKVIQEN 675
Query: 537 GRR---IGFDLDY-DEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKE 592
IGF + + DSSY+R+ SLV EELK++FRPEFLNRLDE+IVFRQLT+ ++ +
Sbjct: 676 DSSSGDIGFGGNLVNGNDSSYDRMASLVNEELKRFFRPEFLNRLDEIIVFRQLTRNDLSQ 735
Query: 593 IADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKM 652
IADIMLK++ DR + K L+VT+R + ++ EG+NP+YGARPLRRAIM+LLED +A ++
Sbjct: 736 IADIMLKQLCDRAEDKSFTLKVTQRAKLVLINEGFNPTYGARPLRRAIMKLLEDRLATQL 795
Query: 653 LAREIKEGDSVIVD 666
L+ I+ G ++VD
Sbjct: 796 LSESIEPGSMILVD 809
>gi|359459996|ref|ZP_09248559.1| ATPase AAA [Acaryochloris sp. CCMEE 5410]
Length = 822
Score = 900 bits (2326), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 434/657 (66%), Positives = 540/657 (82%), Gaps = 5/657 (0%)
Query: 20 NKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAI 79
K LEE GTNLT+LA G LDPVVGRQ +++R++QIL RRTKNNP LIGEPGVGKTA+
Sbjct: 163 QKKSILEEVGTNLTQLARAGNLDPVVGRQNEVQRMIQILSRRTKNNPILIGEPGVGKTAL 222
Query: 80 AEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILF 139
AEGLAQ + + DVP+ ++GK+V+TL++G L+AGTKYRGEFE RLK ++EEI+ +IIL
Sbjct: 223 AEGLAQLVINHDVPEALDGKRVLTLNVGSLLAGTKYRGEFEGRLKAIVEEIRSGGDIILV 282
Query: 140 IDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPV 199
IDE+HTL+G+GAAEG +DAANILKPSLARGELQCIGATTL +YR++IE+DPALERRFQPV
Sbjct: 283 IDEIHTLVGSGAAEGGLDAANILKPSLARGELQCIGATTLADYRQYIERDPALERRFQPV 342
Query: 200 KVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDE 259
V E SV+ETIQIL+G+R YE HH+L +D AL +AA+LS +YI DRFLPDKAIDLIDE
Sbjct: 343 MVNESSVEETIQILQGVRSCYEQHHQLEISDLALEAAAKLSDRYICDRFLPDKAIDLIDE 402
Query: 260 AGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALV 319
AGSRVR+ H++ + L KELRQI + K EA + QD+ AGEL RE++++ +I
Sbjct: 403 AGSRVRISHSKPASAHKALNKELRQILQGKKEATQKQDYSLAGELHIREVEIQKKIQGAN 462
Query: 320 DKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVI 379
KG S T+A + P V E DI HIV++W+G+P+ K++ ES+ LL++E+ LH+RVI
Sbjct: 463 QKG---SSNSTDA--IVPTVNEEDIAHIVASWSGVPLHKLTESESENLLELEDILHQRVI 517
Query: 380 GQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIR 439
GQ++AVKA+SRAIRR R GLK+PNRPIASF+FSGPTGVGK+ELAK LA+ YFGSE AMIR
Sbjct: 518 GQEKAVKAVSRAIRRVRTGLKDPNRPIASFVFSGPTGVGKTELAKVLASSYFGSEAAMIR 577
Query: 440 LDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMML 499
LDMSE+ME HTV+KLIGSPPGYVGY EGGQLTEAVRR+PYTVVLFDEIEKAHPDVFN++L
Sbjct: 578 LDMSEYMEGHTVAKLIGSPPGYVGYNEGGQLTEAVRRKPYTVVLFDEIEKAHPDVFNLLL 637
Query: 500 QILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSL 559
Q+LEDGRLTD+KGRTVDFKNTLLIMTSN+GS VI+KGG +GF+ D+ + Y+RI S+
Sbjct: 638 QVLEDGRLTDAKGRTVDFKNTLLIMTSNLGSKVIQKGGSGLGFEFSKDQSAAQYSRIVSI 697
Query: 560 VTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFR 619
V EELKQ+FRPEFLNRLDE+IVF+QL K EVK+IADI+L+EVF RL + I L+VT+ F+
Sbjct: 698 VNEELKQFFRPEFLNRLDEIIVFQQLHKTEVKQIADILLQEVFARLSEQGISLEVTDLFK 757
Query: 620 ERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTVL 676
+R+VE GY+P GARPLRRAI RLLED +AE++L R +K D +++DVD +G VL
Sbjct: 758 DRLVETGYDPEMGARPLRRAITRLLEDCLAEEILTRRVKARDEIVIDVDEEGQTKVL 814
>gi|297734500|emb|CBI15747.3| unnamed protein product [Vitis vinifera]
Length = 746
Score = 895 bits (2313), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 451/466 (96%), Positives = 462/466 (99%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
MVGESTEAVGAGVGGG++GNKMPTLEEYGTNLTKLAEEGKLDPVVGRQ QIERV QILGR
Sbjct: 279 MVGESTEAVGAGVGGGTTGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQQQIERVTQILGR 338
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNPCLIGEPGVGKTAIAEGLAQRIA+GDVP+TIEGKKVITLDMGLLVAGTKYRGEFE
Sbjct: 339 RTKNNPCLIGEPGVGKTAIAEGLAQRIANGDVPETIEGKKVITLDMGLLVAGTKYRGEFE 398
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTLD
Sbjct: 399 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLD 458
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAA+LS
Sbjct: 459 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAARLS 518
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVR QDFEK
Sbjct: 519 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRSQDFEK 578
Query: 301 AGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVS 360
AGELRDREMDLKAQIS L+DKGKEM+KAETEAGD+GP+VTEVDIQHIVSAWTGIPVEKVS
Sbjct: 579 AGELRDREMDLKAQISTLIDKGKEMTKAETEAGDIGPMVTEVDIQHIVSAWTGIPVEKVS 638
Query: 361 TDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 420
TDESDRLLKMEETLH+RVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS
Sbjct: 639 TDESDRLLKMEETLHRRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 698
Query: 421 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTE 466
ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTE
Sbjct: 699 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTE 744
>gi|218185563|gb|EEC67990.1| hypothetical protein OsI_35764 [Oryza sativa Indica Group]
Length = 853
Score = 894 bits (2309), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/647 (67%), Positives = 544/647 (84%), Gaps = 18/647 (2%)
Query: 35 LAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPD 94
+ +GKLDPVVGRQ QI+ VVQIL RRTKNNPCLIGEPGVGKTAIAEGLAQ IA+GDVP+
Sbjct: 211 ILNKGKLDPVVGRQKQIDHVVQILSRRTKNNPCLIGEPGVGKTAIAEGLAQLIATGDVPE 270
Query: 95 TIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEG 154
TI+ K VI+LDMGLLVAGTKYRGE EERLK ++EEIKQ+ EIILF+DEVHTL+ AG+AEG
Sbjct: 271 TIQQKTVISLDMGLLVAGTKYRGELEERLKNILEEIKQNGEIILFLDEVHTLVTAGSAEG 330
Query: 155 AIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILK 214
AIDAANI KP+LARGELQCIGATT++EYRKHIEKD ALERRFQPVK+PE +V ET+ ILK
Sbjct: 331 AIDAANIFKPALARGELQCIGATTINEYRKHIEKDAALERRFQPVKIPESTVVETVGILK 390
Query: 215 GLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQL--P 272
GLRERY+ HHK++YTDEALV+AA+LS+++I DRFLPDKAIDL+DEAGS VRLR+AQ
Sbjct: 391 GLRERYQGHHKVQYTDEALVAAAELSHKHIRDRFLPDKAIDLMDEAGSIVRLRNAQCKPS 450
Query: 273 EEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEA 332
++ +LE EL++ KEKN+A+ Q+F +A +LRD E+ L+ ISAL DK +M + + A
Sbjct: 451 KKVNDLEAELKKTLKEKNDAISIQNFRRAKQLRDHELQLRTNISALTDKKTQMMEPDAIA 510
Query: 333 GDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAI 392
PVVTE D++H +S WTG+P+ KVS DES +LLK+E+ LH+RV+GQ EAV A+SRAI
Sbjct: 511 ---MPVVTEDDVRHAISRWTGVPLHKVSMDESRKLLKLEDALHRRVVGQGEAVAAVSRAI 567
Query: 393 RRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEE----AMIRLDMSEFMER 448
RRAR+GLK+P RP+AS +F+GPTGVGKSELAKALAA Y+GS E AM+RLDMSE+ME+
Sbjct: 568 RRARLGLKHPGRPVASLVFAGPTGVGKSELAKALAACYYGSSESEEAAMVRLDMSEYMEK 627
Query: 449 HTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLT 508
H V++L+GSPPGYVG+ EGGQLTEAVRRRP+ VVL DE+EKAH DVF+++LQ+L+DGRLT
Sbjct: 628 HAVARLVGSPPGYVGHGEGGQLTEAVRRRPHAVVLLDEVEKAHRDVFDLLLQVLDDGRLT 687
Query: 509 DSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYF 568
D KGRTVDFKNTL++MT+N+GSS+I + + ++ RIK+ VT+E+K++F
Sbjct: 688 DGKGRTVDFKNTLIVMTTNIGSSLIVN---------NGGDGAAAAGRIKNTVTDEMKRHF 738
Query: 569 RPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYN 628
RPEFLNRLDE+IVF+ LT+LEV +IA IML+E R++ K I+L+VT++FRE VVEEG++
Sbjct: 739 RPEFLNRLDEVIVFQPLTELEVGKIAGIMLEEFAGRVREKGIKLKVTDKFRELVVEEGFD 798
Query: 629 PSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTV 675
PSYGARPLRRA++RLLED++AEKMLA E++EGDSVIVD DS GN V
Sbjct: 799 PSYGARPLRRAVVRLLEDTLAEKMLAGEVREGDSVIVDADSAGNAVV 845
>gi|242620119|ref|YP_003002123.1| ATP-dependent clp protease ATP-binding subunit [Aureococcus
anophagefferens]
gi|239997364|gb|ACS36887.1| ATP-dependent clp protease ATP-binding subunit [Aureococcus
anophagefferens]
Length = 846
Score = 884 bits (2283), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 433/686 (63%), Positives = 551/686 (80%), Gaps = 5/686 (0%)
Query: 2 VGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRR 61
+GES EA AG +EE+ TNLT+ A G LDPVVGR +I RV+QIL RR
Sbjct: 142 IGESIEAAVAGEKSELFDMGGLAIEEFTTNLTESAFNGNLDPVVGRDDEISRVIQILARR 201
Query: 62 TKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEE 121
KNNP LIGEPGVGKTA+AEGLAQRI DVP ++ K+VI+LD+GLL+AGTKYRGEFEE
Sbjct: 202 RKNNPVLIGEPGVGKTAVAEGLAQRIVERDVPALLDDKQVISLDVGLLLAGTKYRGEFEE 261
Query: 122 RLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDE 181
RLK++++E++ S+ IIL IDEVHTLIGAGAAEGA+DAANILKP+LARGELQC+GATT++E
Sbjct: 262 RLKRIVDEVRSSENIILVIDEVHTLIGAGAAEGAVDAANILKPALARGELQCLGATTVEE 321
Query: 182 YRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSY 241
YRKHIE+D ALERRFQPV++ EPSVD+T+ IL+ LR RYE HH L+ D+AL +AA++
Sbjct: 322 YRKHIERDSALERRFQPVQIDEPSVDDTVDILRCLRARYERHHGLKIGDDALEAAARMGA 381
Query: 242 QYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKA 301
QYI+DRFLPDKAIDLIDEA +RVRLR + P+ A L++ELR + KEK A+R QDFE+A
Sbjct: 382 QYIADRFLPDKAIDLIDEASARVRLRATRTPDSATGLKRELRDVMKEKEAAIREQDFERA 441
Query: 302 GELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVST 361
++ DRE++++AQ++ ++ K +S TE VV E DI +V+AWTGIPV K+S
Sbjct: 442 ADILDREIEIRAQLNIILSTIKRVSTP-TETSTYDSVVCEEDIAGVVAAWTGIPVNKLSK 500
Query: 362 DESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSE 421
ES++LL ME+TLH R+IGQ++AV A+SRAIRRARVGL+NPNRPIASF+FSGPTGVGK+E
Sbjct: 501 TESEKLLLMEDTLHSRIIGQEQAVSAVSRAIRRARVGLRNPNRPIASFMFSGPTGVGKTE 560
Query: 422 LAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTV 481
L KALA Y+FG+E++M+RLDMSE+MERHTV+KLIGSPPGYVGY+EGGQLTEAVRR+PYTV
Sbjct: 561 LTKALALYFFGAEDSMVRLDMSEYMERHTVAKLIGSPPGYVGYSEGGQLTEAVRRKPYTV 620
Query: 482 VLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEK---GGR 538
VLFDEIEKAHPDVFN++LQILEDGRLTDSKGRT+DFKNT++I+TSNVG+ VIE+ G
Sbjct: 621 VLFDEIEKAHPDVFNLLLQILEDGRLTDSKGRTIDFKNTMIILTSNVGAKVIEQSTTSGG 680
Query: 539 RIGFDL-DYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIM 597
+GFD D D DS Y+R+ LV EELK++FRPEFLNRLDE+IVF+QLTK ++ +IADIM
Sbjct: 681 GLGFDSPDSDNTDSQYSRMAELVNEELKRFFRPEFLNRLDEVIVFQQLTKQDLSQIADIM 740
Query: 598 LKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREI 657
L ++ R + + L +T R ++ +++EG++P YGARPLRRAIM+LLED +A +L+ I
Sbjct: 741 LAQLCARTQEQQFTLNITPRAKDLLIDEGFDPVYGARPLRRAIMKLLEDKLANTVLSEVI 800
Query: 658 KEGDSVIVDVDSDGNVTVLNGSSGAP 683
+ V+VDV+ +T++ S AP
Sbjct: 801 EPDSLVLVDVNDQKELTIIVDRSEAP 826
>gi|403225132|gb|AFR24744.1| ATP-dependent clp protease ATP-binding subunit [uncultured
Pelagomonas]
Length = 833
Score = 881 bits (2277), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 426/686 (62%), Positives = 554/686 (80%), Gaps = 5/686 (0%)
Query: 2 VGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRR 61
+GE+ EAV G +EE+ TNLT+ A G LDPVVGR +I RV+QIL RR
Sbjct: 142 IGENIEAVAPGDKSDQFDMGGLAIEEFTTNLTETAYNGNLDPVVGRDDEISRVIQILARR 201
Query: 62 TKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEE 121
KNNP LIGEPGVGKTA+AEGLAQRI DVP ++ K+VI+LD+GLL+AGTKYRGEFEE
Sbjct: 202 RKNNPVLIGEPGVGKTAVAEGLAQRIVERDVPALLDDKQVISLDVGLLLAGTKYRGEFEE 261
Query: 122 RLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDE 181
RLK++++EI+ S+ IIL IDEVHTLIGAGAAEGA+DAANILKP+LARGELQC+GATT++E
Sbjct: 262 RLKRIVDEIRSSENIILVIDEVHTLIGAGAAEGAVDAANILKPALARGELQCLGATTVEE 321
Query: 182 YRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSY 241
YRKHIE+D ALERRFQPV+VPEPSVD+T+ IL+ LR RYE HH L+ D+AL +A+++
Sbjct: 322 YRKHIERDSALERRFQPVQVPEPSVDDTVDILRCLRARYERHHGLKIGDDALEAASRMGA 381
Query: 242 QYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKA 301
QYI+DRFLPDKAIDLIDEA +RVRLR + P+ A L++ELR + KEK A+R QDFE+A
Sbjct: 382 QYIADRFLPDKAIDLIDEACARVRLRATRTPDSATGLKRELRDVMKEKETAIREQDFERA 441
Query: 302 GELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVST 361
++ DRE++++AQ++ ++ K +S ++ E +V E DI H+V+AWTGIPV K+S
Sbjct: 442 ADILDREIEIRAQLNIILSTVKRVSSSK-ETPTYESIVCEDDIAHVVAAWTGIPVNKLSK 500
Query: 362 DESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSE 421
ES++LL ME+TLH R+IGQ++AV A+S+AIRRARVGL+NPNRPIASF+FSGPTGVGK+E
Sbjct: 501 TESEKLLVMEDTLHSRIIGQEQAVSAVSKAIRRARVGLRNPNRPIASFLFSGPTGVGKTE 560
Query: 422 LAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTV 481
L KALA ++FG+E++M+RLDMSE+MERHTV+KLIGSPPGYVGY+EGGQLTEAVRR+PYTV
Sbjct: 561 LTKALALFFFGAEDSMVRLDMSEYMERHTVAKLIGSPPGYVGYSEGGQLTEAVRRKPYTV 620
Query: 482 VLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKG---GR 538
VLFDEIEK HPDVFN++LQILEDGRLTDSKGRT+DFKNT++I+TSNVG+ I+ G
Sbjct: 621 VLFDEIEKGHPDVFNLLLQILEDGRLTDSKGRTIDFKNTMIILTSNVGAKAIQNAAGSGS 680
Query: 539 RIGFDL-DYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIM 597
+GFD D +++DS Y R+ LV EELK++FRPEFLNRLDE+I+F+QLTK ++ +IADIM
Sbjct: 681 GLGFDSPDTNDEDSEYTRMAELVNEELKRFFRPEFLNRLDEVIIFQQLTKRDLGQIADIM 740
Query: 598 LKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREI 657
L ++ R K ++ L VT R ++ +++EG++P YGARPLRRAIM+LLED +A+ +L+ I
Sbjct: 741 LAQLCARTKDQNFTLNVTPRAKDLLIDEGFDPIYGARPLRRAIMKLLEDKLAQTVLSESI 800
Query: 658 KEGDSVIVDVDSDGNVTVLNGSSGAP 683
+ V+VDV+ + ++++ S P
Sbjct: 801 EPDSLVLVDVNDNRELSIVVDHSSIP 826
>gi|449529856|ref|XP_004171914.1| PREDICTED: LOW QUALITY PROTEIN: chaperone protein ClpC,
chloroplastic-like, partial [Cucumis sativus]
Length = 458
Score = 875 bits (2261), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 431/449 (95%), Positives = 442/449 (98%)
Query: 244 ISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGE 303
SDRFLPDKAIDL+DEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVR QDFEKAGE
Sbjct: 10 FSDRFLPDKAIDLVDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRSQDFEKAGE 69
Query: 304 LRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDE 363
LRDREM+LK +ISALVDKGKEMSKAE+EAGDVGPVVTEVDIQHIVS+WTGIPVEKVSTDE
Sbjct: 70 LRDREMELKTKISALVDKGKEMSKAESEAGDVGPVVTEVDIQHIVSSWTGIPVEKVSTDE 129
Query: 364 SDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELA 423
SDRLLKMEETLHKRVIGQDEAV+AISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELA
Sbjct: 130 SDRLLKMEETLHKRVIGQDEAVQAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELA 189
Query: 424 KALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVL 483
KALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVL
Sbjct: 190 KALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVL 249
Query: 484 FDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFD 543
FDEIEKAHPDVFNMMLQ LEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR+GFD
Sbjct: 250 FDEIEKAHPDVFNMMLQFLEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRMGFD 309
Query: 544 LDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFD 603
LDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFD
Sbjct: 310 LDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFD 369
Query: 604 RLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSV 663
RLK K+I+LQVTERFR+RVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSV
Sbjct: 370 RLKAKEIDLQVTERFRDRVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSV 429
Query: 664 IVDVDSDGNVTVLNGSSGAPESLADPLPV 692
IVDVDSDGNVTVLNGSSGAPESL D +PV
Sbjct: 430 IVDVDSDGNVTVLNGSSGAPESLPDAIPV 458
>gi|147676618|ref|YP_001210833.1| ATPase with chaperone activity, ATP-binding subunit [Pelotomaculum
thermopropionicum SI]
gi|146272715|dbj|BAF58464.1| ATPase with chaperone activity, ATP-binding subunit [Pelotomaculum
thermopropionicum SI]
Length = 810
Score = 873 bits (2256), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 430/668 (64%), Positives = 543/668 (81%), Gaps = 9/668 (1%)
Query: 13 VGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEP 72
V G G + PTL+++G +LT LA E KLDPVVGR+ +IERV+Q+L RRTKNNP LIGEP
Sbjct: 152 VPGKFKGGQTPTLDQFGRDLTALAREDKLDPVVGREKEIERVIQVLSRRTKNNPVLIGEP 211
Query: 73 GVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQ 132
GVGKTAIAEGLAQRI +G+VP+ + K+V+TLDMG LVAGTKYRGEFEERLKK++EEI+Q
Sbjct: 212 GVGKTAIAEGLAQRIVAGNVPEILANKRVVTLDMGSLVAGTKYRGEFEERLKKVIEEIRQ 271
Query: 133 SDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPAL 192
+ II+FIDE+HTL+GAGAAEGAIDAANILKP+LARGELQCIGATTLDEYRKHIEKD AL
Sbjct: 272 AGNIIMFIDELHTLVGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIEKDAAL 331
Query: 193 ERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDK 252
ERRFQP+ V EP+V+ETIQIL+GLR++YE HH++R TD AL +AA+LS +YI+DRFLPDK
Sbjct: 332 ERRFQPITVVEPTVEETIQILRGLRDKYEAHHRVRITDAALEAAAKLSSRYITDRFLPDK 391
Query: 253 AIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLK 312
AIDL+DEAGSRVRL+ P + +ELEK+L + KEK AV GQ+FEKA ELRD+E ++
Sbjct: 392 AIDLVDEAGSRVRLQAFVPPPDLKELEKKLEVLQKEKEAAVNGQEFEKAAELRDQEQKVR 451
Query: 313 AQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEE 372
A++ +L + K+ G VV E DI HIVS+WTGIPV+K++ +ES+RLLKMEE
Sbjct: 452 AELESLRESWKQRQ------GGTELVVDEEDIAHIVSSWTGIPVKKLAEEESERLLKMEE 505
Query: 373 TLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFG 432
LH+RV+GQDEA++A+SRAIRRAR GLK+P RPI SFIF GPTGVGK+ELA+ALA FG
Sbjct: 506 VLHQRVVGQDEAIRAVSRAIRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAEVLFG 565
Query: 433 SEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHP 492
SE+AM+R+DMSE+ME+ VS+L+G+PPGYVGY EGGQLTEAVRRRPYTVVL DEIEKAHP
Sbjct: 566 SEDAMVRIDMSEYMEKFAVSRLVGAPPGYVGYEEGGQLTEAVRRRPYTVVLLDEIEKAHP 625
Query: 493 DVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSS 552
DVFN++LQ++EDGRLTD+KGRTVDF+NT++IMTSNVG I++ +GF D+K+
Sbjct: 626 DVFNILLQVMEDGRLTDAKGRTVDFRNTVIIMTSNVGIQTIKREA-TLGFRTG-DQKEKG 683
Query: 553 YNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIEL 612
Y +KS V EEL++ FRPEFLNR+DE+IVF LT ++EI D+MLKEV R+K +IE+
Sbjct: 684 YEAMKSKVMEELRRTFRPEFLNRVDEIIVFHALTPEHIREIVDLMLKEVAARMKENEIEI 743
Query: 613 QVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGN 672
+VT+ ++ + +EG++ +YGARPLRRA+ R++ED ++E L K GD V +D D G
Sbjct: 744 EVTDAAKDLLAKEGFDEAYGARPLRRAVQRMVEDRLSEDFLKGVFKRGDRVQIDSDGSG- 802
Query: 673 VTVLNGSS 680
+T+L SS
Sbjct: 803 LTILKISS 810
>gi|406983152|gb|EKE04399.1| hypothetical protein ACD_20C00084G0019 [uncultured bacterium]
Length = 837
Score = 868 bits (2244), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 427/669 (63%), Positives = 542/669 (81%), Gaps = 9/669 (1%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
M+GE+ + G S K PTL+E+GTNLT+ A+E +LDPVVGR+ +IERVVQILGR
Sbjct: 141 MLGETRTGASSTTSQGRS--KTPTLDEFGTNLTQAAQEQRLDPVVGREKEIERVVQILGR 198
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNP LIGEPGVGKTAIAEGLA RI SGD+P+ +E K+++ LDMGLLVAGTKYRGEFE
Sbjct: 199 RTKNNPVLIGEPGVGKTAIAEGLANRIVSGDIPEILEDKRLVQLDMGLLVAGTKYRGEFE 258
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
ERLKK+M+EI+ + +IL IDE+HTLIGAGAAEGAIDAANILKP L+RGELQ IGATTLD
Sbjct: 259 ERLKKIMDEIRGAGNVILIIDELHTLIGAGAAEGAIDAANILKPVLSRGELQVIGATTLD 318
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRKH+E+D ALERRFQPV V +PSV+ET++I++GLR +YE HHKL +D A+ A +LS
Sbjct: 319 EYRKHVERDAALERRFQPVFVDQPSVEETMEIIRGLRHKYEEHHKLIISDAAIDYAVKLS 378
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
+YI+DRFLPDKAIDLIDEA SRVRL+ + LP E +E+EKEL+Q+ ++K +A+R Q+FEK
Sbjct: 379 DRYITDRFLPDKAIDLIDEASSRVRLQASSLPPEGKEIEKELKQVIRDKEQAIRDQEFEK 438
Query: 301 AGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVS 360
A +LRD E DLK +I + K K E EA VVTE +I +IVS+WTG+PV K++
Sbjct: 439 ASQLRDIEADLKEKIREISQKW----KTEQEANK--SVVTEEEIAYIVSSWTGVPVTKLT 492
Query: 361 TDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 420
E+DRLLK+E+TLHKRVIGQ A+ +IS+AIRRARVGLK+P+RPI SFIFSGPTGVGK+
Sbjct: 493 EGETDRLLKLEDTLHKRVIGQHSAIVSISKAIRRARVGLKSPSRPIGSFIFSGPTGVGKT 552
Query: 421 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 480
ELAKALA FGSEE MIR+DMSEFMERHT SKLIGSPPGYVGY EGGQLTEA+R+RPY+
Sbjct: 553 ELAKALAESMFGSEENMIRIDMSEFMERHTTSKLIGSPPGYVGYNEGGQLTEAIRKRPYS 612
Query: 481 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI 540
VVLFDEIEKAHPDVFN++LQIL+DGRL+DS+GR +FKN+++IMTSNVG+ +E ++
Sbjct: 613 VVLFDEIEKAHPDVFNLLLQILDDGRLSDSRGRVTNFKNSVIIMTSNVGARSLENTS-KL 671
Query: 541 GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 600
GF + DE+ Y R+K V EE+K+ FRPEFLNRLD++IVF LTK E+++I DIML +
Sbjct: 672 GFAVAEDEEKDRYERVKDTVMEEMKKEFRPEFLNRLDDIIVFSHLTKEEIRKIVDIMLTD 731
Query: 601 VFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEG 660
+ R+K +++ L++ ++ + EEGY+ +YGARPLRR I + +EDS+AE++L KEG
Sbjct: 732 LIKRIKGQELMLEIPNEVKDFLAEEGYSQTYGARPLRRVIQKRIEDSIAEEILTGAYKEG 791
Query: 661 DSVIVDVDS 669
D + +D+D+
Sbjct: 792 DVIKLDLDN 800
>gi|254425327|ref|ZP_05039045.1| ATPase, AAA family [Synechococcus sp. PCC 7335]
gi|196192816|gb|EDX87780.1| ATPase, AAA family [Synechococcus sp. PCC 7335]
Length = 822
Score = 867 bits (2239), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 427/685 (62%), Positives = 549/685 (80%), Gaps = 23/685 (3%)
Query: 1 MVGESTEAVGAGVGGGSSGNK---MPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQI 57
++GEST VGG + L EYGT+LT++A EGKLDPV+GR+ +IERVVQ+
Sbjct: 141 VIGESTPVASGRVGGSQKKERKSDSSVLTEYGTDLTEVAAEGKLDPVIGRRQEIERVVQV 200
Query: 58 LGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRG 117
LGRRTKNNP L+GEPGVGKTAIAEGLAQRI + DVP+ + K+VI+LDMGLLV+GT++RG
Sbjct: 201 LGRRTKNNPVLVGEPGVGKTAIAEGLAQRIVNQDVPEALIDKRVISLDMGLLVSGTRFRG 260
Query: 118 EFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGAT 177
+FEER+ ++++E+++S ++IL IDE+HTL+GAG+ EG +DAAN+LKP+LARGE+QCIGAT
Sbjct: 261 DFEERITQVIDEVRKSQDVILVIDEIHTLVGAGSLEGGMDAANLLKPALARGEMQCIGAT 320
Query: 178 TLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAA 237
TLDEYRKHIEKD ALERRFQPV + PSV++T++IL GLR RYE H+L TDEA+ +AA
Sbjct: 321 TLDEYRKHIEKDAALERRFQPVTIAPPSVEDTVEILYGLRSRYEQFHRLNITDEAVEAAA 380
Query: 238 QLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQ-LPEEARELEKELRQITKEKNEAVRGQ 296
LS +YI+DR LPDKAIDLIDEAGSRVRLR+++ +P A EL ELRQ+ K EAV+ Q
Sbjct: 381 TLSDRYITDRHLPDKAIDLIDEAGSRVRLRYSRNIP--ASELRSELRQVQKNILEAVQQQ 438
Query: 297 DFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVG----PVVTEVDIQHIVSAWT 352
D+++A LR +E L +I +T GDV P V++ DI IVS+WT
Sbjct: 439 DYDQAVTLRQKESALTQKIQ------------DTLEGDVSIINQPEVSDEDIADIVSSWT 486
Query: 353 GIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFS 412
G+PV ++ ES ++ +E+TLH+RV+GQDEAV+A+SRA+RRARVGL+ +RPIAS +FS
Sbjct: 487 GVPVNAITETESAMMMHLEQTLHERVVGQDEAVEAVSRAVRRARVGLRGLDRPIASLVFS 546
Query: 413 GPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTE 472
GPTGVGK+ELAKALA+ FGSEEAMIRLDMSEFME HTVSKLIGSPPG+VGY EGGQLTE
Sbjct: 547 GPTGVGKTELAKALASAVFGSEEAMIRLDMSEFMESHTVSKLIGSPPGFVGYDEGGQLTE 606
Query: 473 AVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSV 532
AVRRRPY+V+L DEIEKAHPDVFN++LQ+L+DG L+DSKGR V FKNTL+IMTSN+GS V
Sbjct: 607 AVRRRPYSVILMDEIEKAHPDVFNILLQVLDDGHLSDSKGREVSFKNTLIIMTSNIGSKV 666
Query: 533 IEKGGRRIGFDL-DYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVK 591
IEKGG +GF+L + D S YN I++LV EE+KQ+FRPE +NR+DE+IVFRQLTK EVK
Sbjct: 667 IEKGGGGLGFELTEEDSMTSRYNNIRNLVNEEMKQFFRPEMINRIDEIIVFRQLTKAEVK 726
Query: 592 EIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEK 651
EIA+I+LK+V +RL +++ +TE F++R+VEEGY+ YGARP+RRAI RL+ED +AE
Sbjct: 727 EIAEILLKQVGERLGDRNLSFDMTEAFKDRLVEEGYDQRYGARPMRRAISRLVEDRLAEA 786
Query: 652 MLAREIKEGDSVIVDVDSDGNVTVL 676
+LA +++GD+V+ D+D DG +T L
Sbjct: 787 ILAGTLQDGDTVVFDIDKDGEITAL 811
>gi|427418168|ref|ZP_18908351.1| ATPase with chaperone activity, ATP-binding subunit [Leptolyngbya
sp. PCC 7375]
gi|425760881|gb|EKV01734.1| ATPase with chaperone activity, ATP-binding subunit [Leptolyngbya
sp. PCC 7375]
Length = 817
Score = 860 bits (2222), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/663 (62%), Positives = 539/663 (81%), Gaps = 10/663 (1%)
Query: 14 GGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPG 73
G + G + LEE+ T+LTKLA EG +DPVVGR+ +IERVVQILGRR+KNNP LIGEPG
Sbjct: 153 GQDARGFRGKALEEFATDLTKLAAEGNIDPVVGRRQEIERVVQILGRRSKNNPVLIGEPG 212
Query: 74 VGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQS 133
VGKTAIAEGLAQRI + DVP+ + ++V++LD+ LVAGT++RGEFEERLK+++ E+ ++
Sbjct: 213 VGKTAIAEGLAQRIINQDVPELLLDQRVLSLDINSLVAGTRFRGEFEERLKQIVAEVNKA 272
Query: 134 DEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALE 193
IIL IDE+HTL+GAG EG +DAAN+LKP+LARGELQCIGATTLDEYRK+IEKD ALE
Sbjct: 273 GNIILLIDEIHTLVGAGGMEGGMDAANMLKPALARGELQCIGATTLDEYRKYIEKDGALE 332
Query: 194 RRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKA 253
RRFQPV V EPSV+ETI+IL+G+R YE HH L +D+ALV+AA+LS +YI+DR+LPDKA
Sbjct: 333 RRFQPVMVNEPSVEETIEILQGVRASYEQHHNLLISDDALVTAAKLSNRYIADRYLPDKA 392
Query: 254 IDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKA 313
IDLIDEAGS V LRH+Q A+EL++ LR+I ++K+ AV+ Q+F++A ELRD+E++L+A
Sbjct: 393 IDLIDEAGSCVHLRHSQ-TSLAKELKQSLRKIIQDKDAAVKAQEFDRASELRDQELELEA 451
Query: 314 QISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEET 373
++ + A D PVVT DI +V++WTG+P +++ ES L+K+EET
Sbjct: 452 KLQDF--------NEDRAATDTRPVVTVEDIAQVVASWTGVPANRITKSESAMLMKLEET 503
Query: 374 LHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGS 433
LH+R+IGQ+ AV A+++AIRRARVGL++ RPIASFIF GPTGVGK+EL KALA FG+
Sbjct: 504 LHQRIIGQENAVNAVAKAIRRARVGLRSEQRPIASFIFCGPTGVGKTELTKALADIVFGA 563
Query: 434 EEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPD 493
E+A+IRLDMSE+ME +V+KLIGSPPGYVGY +GGQLTEAVRR+PYTVVLFDEIEKAHPD
Sbjct: 564 EDAIIRLDMSEYMEPQSVAKLIGSPPGYVGYGDGGQLTEAVRRKPYTVVLFDEIEKAHPD 623
Query: 494 VFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDL-DYDEKDSS 552
VFN++LQ+L+DGRLTDS+GR VDFKNT++IMTSN+GS IEK G IGFD+ D D +
Sbjct: 624 VFNLLLQLLDDGRLTDSQGRVVDFKNTVIIMTSNIGSRAIEKQGTGIGFDMIDGDLATAQ 683
Query: 553 YNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIEL 612
YNR + V + LK FRPEFLNRLDE+IVF QL + EVK+IADI+L++V RL + I++
Sbjct: 684 YNRTREQVNDALKSSFRPEFLNRLDEIIVFHQLKRSEVKQIADILLQDVAKRLVEQAIKI 743
Query: 613 QVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGN 672
+VTE F++++V EGY+PSYGARPLRRAI RL+EDS+AE +LA +I+ G++ ++DV+ DG
Sbjct: 744 EVTEAFKDKLVVEGYDPSYGARPLRRAITRLVEDSLAEALLAGDIRAGETAVLDVNDDGQ 803
Query: 673 VTV 675
VTV
Sbjct: 804 VTV 806
>gi|335039209|ref|ZP_08532387.1| ATPase AAA-2 domain protein [Caldalkalibacillus thermarum TA2.A1]
gi|334180907|gb|EGL83494.1| ATPase AAA-2 domain protein [Caldalkalibacillus thermarum TA2.A1]
Length = 811
Score = 853 bits (2204), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/676 (61%), Positives = 535/676 (79%), Gaps = 10/676 (1%)
Query: 5 STEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKN 64
S EA+ A GG G PTL+ +LT +A+ +LDPV+GR +IERV+Q+L RRTKN
Sbjct: 144 SNEAMAATPQGGQGGASTPTLDSLARDLTAIAKNDELDPVIGRDKEIERVIQVLSRRTKN 203
Query: 65 NPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLK 124
NP LIGEPGVGKTAIAEGLAQRI + ++P+T+ GK+V+TLDMG +VAGTKYRGEFE+RLK
Sbjct: 204 NPVLIGEPGVGKTAIAEGLAQRIVNNEIPETLRGKRVMTLDMGTVVAGTKYRGEFEDRLK 263
Query: 125 KLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRK 184
K+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKP+LARGELQCIGATTLDEYRK
Sbjct: 264 KVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPALARGELQCIGATTLDEYRK 323
Query: 185 HIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYI 244
+IEKD ALERRFQP+ V PS+++TI IL+GLR+RYE HH+++ TDEA+ A +LS +YI
Sbjct: 324 YIEKDAALERRFQPIMVDPPSIEDTILILRGLRDRYEAHHRVKITDEAIEQAVKLSDRYI 383
Query: 245 SDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGEL 304
+DRFLPDKAIDLIDEA S+VRL+ +P +ELE++L ++ KEK+ AV+ Q+FEKA L
Sbjct: 384 TDRFLPDKAIDLIDEAASKVRLKSYTVPPNLKELEQKLEEVRKEKDAAVQSQEFEKAASL 443
Query: 305 RDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDES 364
RD E L+ ++ ++ KE + G VT DI IVS+WTGIPV+K++ +ES
Sbjct: 444 RDTEQKLREELEKTKNEWKE------KQGQTDSEVTAEDIADIVSSWTGIPVKKLAQEES 497
Query: 365 DRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAK 424
+RLL MEE LH+RVIGQDEAVKAIS+AIRRAR GLK+P RPI SFIF GPTGVGK+ELAK
Sbjct: 498 ERLLNMEEILHERVIGQDEAVKAISKAIRRARAGLKDPKRPIGSFIFLGPTGVGKTELAK 557
Query: 425 ALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLF 484
ALA FG E A+IR+DMSE+ME+HT S+LIGSPPGYVGY EGGQLTE VRR+PY+V+L
Sbjct: 558 ALAESLFGDENAVIRIDMSEYMEKHTTSRLIGSPPGYVGYEEGGQLTEKVRRKPYSVILL 617
Query: 485 DEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDL 544
DEIEKAHPDVFN++LQ+LEDGRLTD+KGRTVDFKNT++IMTSNVG+ ++ K G +GF
Sbjct: 618 DEIEKAHPDVFNILLQVLEDGRLTDAKGRTVDFKNTVIIMTSNVGAELLRK-GTTLGF-- 674
Query: 545 DYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDR 604
+ ++ +Y +K V ELK+ FRPEFLNR+DE+IVF L + + +I D+M K++ R
Sbjct: 675 QAENREQNYQNMKEKVMGELKRMFRPEFLNRIDEVIVFHSLEEEHLMQIVDLMAKQLQKR 734
Query: 605 LKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVI 664
LK +DIE +TE + +V+EGY+P YGARPLRRA+ R++ED ++E++L I +GDSV+
Sbjct: 735 LKEQDIEFTLTEEAKRHIVKEGYDPQYGARPLRRALQRMVEDRLSEELLQGNISKGDSVV 794
Query: 665 VDVDSDGNVTVLNGSS 680
+DV+ DG + VL S
Sbjct: 795 IDVE-DGQLKVLKKES 809
>gi|333980531|ref|YP_004518476.1| ATPase AAA [Desulfotomaculum kuznetsovii DSM 6115]
gi|333824012|gb|AEG16675.1| ATPase AAA-2 domain protein [Desulfotomaculum kuznetsovii DSM 6115]
Length = 828
Score = 851 bits (2199), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/658 (63%), Positives = 529/658 (80%), Gaps = 9/658 (1%)
Query: 18 SGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKT 77
+ PTL+++G +LT LA + KLDPVVGR+ +IERV+QIL RRTKNNP LIGEPGVGKT
Sbjct: 161 QASSTPTLDQFGRDLTALARDDKLDPVVGREKEIERVIQILSRRTKNNPVLIGEPGVGKT 220
Query: 78 AIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEII 137
AIAEGLAQRI G+VP+ + K+V+TLD+ +VAGTKYRGEFEER+KK+++EI ++ II
Sbjct: 221 AIAEGLAQRIVQGNVPEVLLNKRVVTLDLASMVAGTKYRGEFEERIKKVIDEIIKAGNII 280
Query: 138 LFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQ 197
+FIDE+HTLIGAGAAEGAIDAANILKP+LARGELQCIGATTLDEYRKHIE+DPALERRFQ
Sbjct: 281 VFIDELHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIERDPALERRFQ 340
Query: 198 PVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLI 257
P+ V EP+V+ETI ILKGLR++YE HH++R TDEAL +AA+LS +YI+DRFLPDKAIDL+
Sbjct: 341 PIMVEEPTVEETIAILKGLRDKYEAHHRVRITDEALEAAARLSDRYITDRFLPDKAIDLV 400
Query: 258 DEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISA 317
DEA SRVRLR P ++LEK + +I KEK AV Q+FEKA +LRD+E LK ++ A
Sbjct: 401 DEASSRVRLRAFTAPPNLKDLEKRIEEIQKEKEAAVNNQEFEKAAQLRDQEQQLKKELEA 460
Query: 318 LVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKR 377
+ G VVTE DI IVS+WTGIPV+K++ +E++RLL++EE LH+R
Sbjct: 461 ------RRQDWQAARGKEELVVTEEDIAQIVSSWTGIPVKKLAEEETERLLRLEEILHQR 514
Query: 378 VIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAM 437
V+GQDEAV+A++R++RRAR GLK+P RPI SFIF GPTGVGK+ELA+ALA FG E+A+
Sbjct: 515 VVGQDEAVRAVARSVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAEALFGDEDAL 574
Query: 438 IRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNM 497
+RLDMSE+MER VS+L+G+PPGYVGY EGGQLTEAVRR+PYTVVL DEIEKAHPDVFN+
Sbjct: 575 VRLDMSEYMERFAVSRLVGAPPGYVGYEEGGQLTEAVRRKPYTVVLLDEIEKAHPDVFNI 634
Query: 498 MLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIK 557
+LQ+LEDGRLTD+KGRTVDF+NT++IMTSNVG + K G +GF + E+++SY R+K
Sbjct: 635 LLQVLEDGRLTDAKGRTVDFRNTVIIMTSNVGVHTLRKEG-TLGFRTE-QEREASYERMK 692
Query: 558 SLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTER 617
VTEELK+ FRPEFLNR+DE+IVF LT +K+I +MLKEV R+K D+E++ TE
Sbjct: 693 ERVTEELKRTFRPEFLNRIDEIIVFHSLTAEHIKKIVGLMLKEVAGRMKEHDVEVEFTEA 752
Query: 618 FRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTV 675
RE + EG++ +YGARPLRRAI RL+ED ++E++L + GD V+VD DG + V
Sbjct: 753 AREILAREGFDETYGARPLRRAIQRLVEDRLSEELLKGTFQRGDRVVVD-GEDGRIVV 809
>gi|323703791|ref|ZP_08115429.1| ATPase AAA-2 domain protein [Desulfotomaculum nigrificans DSM 574]
gi|323531260|gb|EGB21161.1| ATPase AAA-2 domain protein [Desulfotomaculum nigrificans DSM 574]
Length = 818
Score = 845 bits (2182), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/663 (61%), Positives = 538/663 (81%), Gaps = 8/663 (1%)
Query: 17 SSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGK 76
+ G K +L+++G +LT LA+EGKLDPVVGR +IERV+Q+L RRTKNNP LIGEPGVGK
Sbjct: 160 AGGCKTVSLDQFGRDLTGLAKEGKLDPVVGRAKEIERVIQVLSRRTKNNPVLIGEPGVGK 219
Query: 77 TAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEI 136
TAIAEGLAQRI G+VP+ + ++V+TLD+ +VAGTKYRGEFE+RLKK+MEEI+Q+ +
Sbjct: 220 TAIAEGLAQRIVEGNVPEILLNRRVVTLDLAGMVAGTKYRGEFEDRLKKIMEEIRQAGNV 279
Query: 137 ILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRF 196
ILFIDE+HTLIGAGAAEGAIDAANILKP+LARGE+Q IGATTLDEYRK+IEKDPALERRF
Sbjct: 280 ILFIDELHTLIGAGAAEGAIDAANILKPALARGEIQTIGATTLDEYRKYIEKDPALERRF 339
Query: 197 QPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDL 256
QP++V EP+V+ETIQIL+G+R++YE HH++R TDEA+ +AA+LS +YI+DRFLPDKAIDL
Sbjct: 340 QPIQVDEPTVEETIQILQGIRDKYEAHHRVRITDEAITAAARLSDRYITDRFLPDKAIDL 399
Query: 257 IDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQIS 316
IDEA SRVR++ P + ++ EKEL + KEK A+ Q+FEKA ELRDRE L +++
Sbjct: 400 IDEAASRVRIKAFTAPPDLKDKEKELEALRKEKEAAINNQEFEKAAELRDREQVLMSEL- 458
Query: 317 ALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHK 376
++ +E S + + GD G VVTE DI IVS+WTG+PV+K++ +ES++LL +EE LH+
Sbjct: 459 ---NQARE-SWNQAKGGD-GLVVTEEDIAGIVSSWTGVPVQKLAQEESEKLLNLEEVLHQ 513
Query: 377 RVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEA 436
RV+GQD+AVKA+SRA+RRAR GLK+P RP+ SFIF GPTGVGK+ELA+ALA FG E+A
Sbjct: 514 RVVGQDDAVKAVSRAVRRARAGLKDPKRPVGSFIFLGPTGVGKTELARALAEALFGDEDA 573
Query: 437 MIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFN 496
++R+DMSE+ME+H VS+L+G+PPGYVGY EGGQLTEAVRR+PY+VVL DEIEKAHPDVFN
Sbjct: 574 LVRIDMSEYMEKHAVSRLVGAPPGYVGYDEGGQLTEAVRRKPYSVVLLDEIEKAHPDVFN 633
Query: 497 MMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRI 556
++LQ+LEDGRLTD+KGRTVDF+NT++IMTSNVG S I+ G R+GF D+ ++ Y ++
Sbjct: 634 ILLQVLEDGRLTDAKGRTVDFRNTVIIMTSNVGLSTIKSVG-RVGFAAQADQNEAEYEKM 692
Query: 557 KSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTE 616
K V E LK+ FRPEFLNR+DE IVF L + +K+I +MLKEV R++ ++ ++ TE
Sbjct: 693 KERVEEALKRTFRPEFLNRIDETIVFHPLNREHIKQIVGLMLKEVAKRMEEHEVYVEFTE 752
Query: 617 RFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTVL 676
+E++ E GY+ YGARPLRR I R +ED ++E+++ K+GD V++DV+ +G TV
Sbjct: 753 AAKEKLAEIGYSEEYGARPLRREIQRKVEDRLSEELIKGTFKKGDKVVIDVE-NGEFTVR 811
Query: 677 NGS 679
S
Sbjct: 812 QAS 814
>gi|333922411|ref|YP_004495991.1| ATPase AAA-2 domain-containing protein [Desulfotomaculum
carboxydivorans CO-1-SRB]
gi|333747972|gb|AEF93079.1| ATPase AAA-2 domain protein [Desulfotomaculum carboxydivorans
CO-1-SRB]
Length = 818
Score = 844 bits (2181), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/663 (61%), Positives = 539/663 (81%), Gaps = 8/663 (1%)
Query: 17 SSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGK 76
+ G K +L+++G +LT LA+EGKLDPVVGR +IERV+Q+L RRTKNNP LIGEPGVGK
Sbjct: 160 AGGCKTVSLDQFGRDLTGLAKEGKLDPVVGRAKEIERVIQVLSRRTKNNPVLIGEPGVGK 219
Query: 77 TAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEI 136
TAIAEGLAQRI G+VP+ + ++V+TLD+ +VAGTKYRGEFE+RLKK+MEEI+Q+ +
Sbjct: 220 TAIAEGLAQRIVEGNVPEILLNRRVVTLDLAGMVAGTKYRGEFEDRLKKIMEEIRQAGNV 279
Query: 137 ILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRF 196
ILFIDE+HTLIGAGAAEGAIDAANILKP+LARGE+Q IGATTLDEYRK+IEKDPALERRF
Sbjct: 280 ILFIDELHTLIGAGAAEGAIDAANILKPALARGEIQTIGATTLDEYRKYIEKDPALERRF 339
Query: 197 QPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDL 256
QP++V EP+V+ETIQIL+G+R++YE HH++R TDEA+ +AA+LS +YI+DRFLPDKAIDL
Sbjct: 340 QPIQVDEPTVEETIQILQGIRDKYEAHHRVRITDEAITAAARLSDRYITDRFLPDKAIDL 399
Query: 257 IDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQIS 316
IDEA SRVR++ P + ++ EKEL + KEK A+ Q+FEKA ELRDRE L +++
Sbjct: 400 IDEAASRVRIKAFTAPPDLKDKEKELEALRKEKEAAINNQEFEKAAELRDREQVLMSEL- 458
Query: 317 ALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHK 376
++ +E S +T+ GD G VVTE DI IVS+WTG+PV+K++ +ES++LL +EE LH+
Sbjct: 459 ---NQARE-SWNQTKGGD-GLVVTEEDIAGIVSSWTGVPVQKLAQEESEKLLNLEEVLHQ 513
Query: 377 RVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEA 436
RV+GQD+AVKA+SRA+RRAR GLK+P RP+ SFIF GPTGVGK+ELA+ALA FG E+A
Sbjct: 514 RVVGQDDAVKAVSRAVRRARAGLKDPKRPVGSFIFLGPTGVGKTELARALAEALFGDEDA 573
Query: 437 MIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFN 496
++R+DMSE+ME+H VS+L+G+PPGYVGY EGGQLTEAVRR+PY+VVL DEIEKAHPDVFN
Sbjct: 574 LVRIDMSEYMEKHAVSRLVGAPPGYVGYDEGGQLTEAVRRKPYSVVLLDEIEKAHPDVFN 633
Query: 497 MMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRI 556
++LQ+LEDGRLTD+KGRTVDF+NT++IMTSNVG S I+ G R+GF ++ ++ Y ++
Sbjct: 634 ILLQVLEDGRLTDAKGRTVDFRNTVIIMTSNVGLSTIKSVG-RVGFAAQAEQNEAEYEKM 692
Query: 557 KSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTE 616
K V E LK+ FRPEFLNR+DE IVF L + +K+I +MLKEV R++ ++ ++ TE
Sbjct: 693 KERVEEALKRTFRPEFLNRIDETIVFHPLNREHIKQIVGLMLKEVAKRMEEHEVYVEFTE 752
Query: 617 RFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTVL 676
+E++ E GY+ YGARPLRR I R +ED ++E+++ K+GD V++DV+ +G TV
Sbjct: 753 AAKEKLAEIGYSEEYGARPLRREIQRKVEDRLSEELIKGTFKKGDKVVIDVE-NGEFTVR 811
Query: 677 NGS 679
S
Sbjct: 812 QAS 814
>gi|167629433|ref|YP_001679932.1| clpc ATPase [Heliobacterium modesticaldum Ice1]
gi|167592173|gb|ABZ83921.1| clpc ATPase [Heliobacterium modesticaldum Ice1]
Length = 814
Score = 842 bits (2176), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/669 (62%), Positives = 529/669 (79%), Gaps = 16/669 (2%)
Query: 14 GGGSS-----GNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCL 68
G GSS G K P L E+G +LT+LA +GKLDPV+GR+ +IERVVQIL RRTKNNP L
Sbjct: 150 GNGSSAAAERGRKTPALNEFGRDLTQLARDGKLDPVIGREREIERVVQILSRRTKNNPVL 209
Query: 69 IGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLME 128
IGEPGVGKTA+AEGLAQRI G VP+T+ GK+V+TLD+ +VAG+KYRGEFEERLKK+M+
Sbjct: 210 IGEPGVGKTAVAEGLAQRIVDGKVPETLTGKRVVTLDLSSVVAGSKYRGEFEERLKKVMD 269
Query: 129 EIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEK 188
EI+Q+ ++LFIDE+HTLIGAGAAEGAIDAANILKP+LARGELQCIGATTLDEYRKHIE+
Sbjct: 270 EIRQAGNVVLFIDELHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIER 329
Query: 189 DPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRF 248
DPALERRFQP+ V EP +E + ILKGLR+RYE HH+++ TDEA+ +A +LS +YISDR+
Sbjct: 330 DPALERRFQPITVGEPKREEAVAILKGLRDRYEAHHRVQITDEAIEAAVRLSDRYISDRY 389
Query: 249 LPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDRE 308
LPDKAIDLIDEA SRVRL+ P + +ELE L + KEK AV Q+FEKA +LRD+E
Sbjct: 390 LPDKAIDLIDEAASRVRLQTFTAPPDMKELESRLEGLRKEKEAAVLSQEFEKAAQLRDQE 449
Query: 309 MDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLL 368
M L+AQ+ K+ S E G VV E DI IVS+WTG+PV +++ ES RLL
Sbjct: 450 MQLRAQLE------KQKSDWEHARGSANTVVREEDIAQIVSSWTGVPVTRLAESESARLL 503
Query: 369 KMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAA 428
K+EE LH+RVIGQDEAV A+SRA+RRAR GLK+P RPI SFIF GPTGVGK+ELA+ALA
Sbjct: 504 KLEEELHRRVIGQDEAVAAVSRAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAE 563
Query: 429 YYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIE 488
FG E+AM+R+DMSE+ME+H+VS+L+G+PPGY+G+ EGGQLTEAVRRRPY+V+L DEIE
Sbjct: 564 ALFGQEDAMVRIDMSEYMEKHSVSRLVGAPPGYIGHDEGGQLTEAVRRRPYSVILLDEIE 623
Query: 489 KAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGF---DLD 545
KA+P+VFN++LQ+LEDGRLTDSKGRTVDF+NT++IMTSNVG+ I++ +GF +
Sbjct: 624 KANPEVFNILLQVLEDGRLTDSKGRTVDFRNTVIIMTSNVGAQTIKRSA-VMGFKPTEQG 682
Query: 546 YDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRL 605
E++ Y +K+ V EELK+ FRPEFLNR+DEMIVF L +++ I D+ML EV RL
Sbjct: 683 AKEREVQYEGMKNRVMEELKRSFRPEFLNRIDEMIVFHTLAAEDIRRIVDLMLGEVNRRL 742
Query: 606 KTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIV 665
+ ++VT+ R+ + + GY+ ++GARPLRRAI+RL+ED ++E +L E K GD +IV
Sbjct: 743 AEAGLSMEVTDAARDHLAKVGYDETFGARPLRRAILRLVEDEISEALLKGEYKAGDQIIV 802
Query: 666 DVDSDGNVT 674
+ +DG ++
Sbjct: 803 GM-ADGKLS 810
>gi|20808693|ref|NP_623864.1| chaperone ATPase [Thermoanaerobacter tengcongensis MB4]
gi|254478740|ref|ZP_05092109.1| ATPase, AAA family [Carboxydibrachium pacificum DSM 12653]
gi|20517331|gb|AAM25468.1| ATPases with chaperone activity, ATP-binding subunit
[Thermoanaerobacter tengcongensis MB4]
gi|214035305|gb|EEB76010.1| ATPase, AAA family [Carboxydibrachium pacificum DSM 12653]
Length = 816
Score = 842 bits (2175), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/673 (61%), Positives = 538/673 (79%), Gaps = 9/673 (1%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
M+ E A + V + N PTL ++G +LT LA +GKLDPV+GR+ +IERV+QIL R
Sbjct: 142 MLSEEPAAGPSKVSKAKNTN-TPTLNQFGRDLTDLARDGKLDPVIGREKEIERVIQILSR 200
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNP LIGEPGVGKTAI EGLAQ+I G+VP+ ++ K+V+TLD+ LVAGTKYRGEFE
Sbjct: 201 RTKNNPVLIGEPGVGKTAIVEGLAQKIVEGEVPEILKDKRVVTLDLASLVAGTKYRGEFE 260
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
+RLK ++ E+ ++ +ILF+DE+HTLIGAGAAEGAIDA+NILKP+LARGE+Q IGATTLD
Sbjct: 261 DRLKTVINEVIKAGNVILFVDEMHTLIGAGAAEGAIDASNILKPALARGEIQVIGATTLD 320
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRK++E+DPALERRFQP+ V EP+V+ETI+ILKGLR++YE HH+++ TDEAL +AA+LS
Sbjct: 321 EYRKYVERDPALERRFQPIMVEEPTVEETIEILKGLRDKYEAHHRVKITDEALEAAAKLS 380
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
++YI+DRFLPDKAIDLIDEA SRVRL+ P E +ELE ++ + KEK EA+R Q++EK
Sbjct: 381 HRYITDRFLPDKAIDLIDEAASRVRLKTVTAPPEIKELEDKINDLIKEKEEAIRTQEYEK 440
Query: 301 AGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVS 360
A ++RD E L+ Q+ L K K + +E VGP +I +VS WTGIPV+K++
Sbjct: 441 AAKIRDEEQKLREQLEEL--KAKWQQNSLSEEKSVGP----EEIAQVVSMWTGIPVKKLA 494
Query: 361 TDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 420
+ES+RLL +EE LH+RVIGQDEAV+A+++AIRRARVGLK+P RPI SFIF GPTGVGK+
Sbjct: 495 EEESERLLHLEEILHERVIGQDEAVEAVAKAIRRARVGLKDPKRPIGSFIFLGPTGVGKT 554
Query: 421 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 480
EL+KALA FG E AMIRLDMSE+MERHTVSKLIGSPPGYVG+ EGGQLTE VRRRPY+
Sbjct: 555 ELSKALAEALFGDENAMIRLDMSEYMERHTVSKLIGSPPGYVGFEEGGQLTEKVRRRPYS 614
Query: 481 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI 540
V+L DEIEKAHPDVFN++LQILEDGRLTDSKGRTVDFKNT++IMTSNVG+ +++K +
Sbjct: 615 VILLDEIEKAHPDVFNILLQILEDGRLTDSKGRTVDFKNTVIIMTSNVGAELLKKQT-TL 673
Query: 541 GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 600
GF E +S+ +IK + EL++ FRPEFLNR+DE+IVF L+K +++IADIM+KE
Sbjct: 674 GFMPQEKEDKASFEKIKETLMAELRKTFRPEFLNRVDEIIVFHPLSKEHIEKIADIMIKE 733
Query: 601 VFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEG 660
+ RL+ +I+L+ T +E ++++GY+P+YGARPLRR I R++E+ ++E ML E+K G
Sbjct: 734 LNKRLEENNIKLEFTPEAKEEIIKQGYDPNYGARPLRRVIQRIVENQLSELMLQGEVKPG 793
Query: 661 DSVIVDVDSDGNV 673
D +IV + DG +
Sbjct: 794 DELIVTAE-DGKI 805
>gi|220927785|ref|YP_002504694.1| ATPase AAA [Clostridium cellulolyticum H10]
gi|219998113|gb|ACL74714.1| ATPase AAA-2 domain protein [Clostridium cellulolyticum H10]
Length = 810
Score = 840 bits (2170), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/675 (59%), Positives = 534/675 (79%), Gaps = 7/675 (1%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
++ E T G SS + PTL ++G +LT +A +GK+DPV+GR +IERV+QIL R
Sbjct: 141 ILTEETPGSNGSAKGNSSNSNTPTLNQFGRDLTDMARDGKIDPVIGRDKEIERVIQILSR 200
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNPCLIGEPGVGKTAIAEGLAQ+I G++P+ + K+V+TLD+ +VAG KYRGEFE
Sbjct: 201 RTKNNPCLIGEPGVGKTAIAEGLAQKIVEGNIPEILSNKRVVTLDLSSMVAGAKYRGEFE 260
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
+RLKK MEEI+++ +ILFIDE+HT++GAGAAEGAIDA+NILKPSLARGE+Q IGATTL+
Sbjct: 261 DRLKKAMEEIRKAANVILFIDELHTIVGAGAAEGAIDASNILKPSLARGEIQVIGATTLN 320
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRKHIEKD ALERRFQP+ V EPS +E ++ILKG+R++YE HH+++ TD+AL +A +L
Sbjct: 321 EYRKHIEKDAALERRFQPITVGEPSKEEAVEILKGVRDKYEAHHRVKITDDALEAAVKLG 380
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
+YI+DRFLPDKAIDLIDEA SR+RL+ P + +E+E+ + ++ KEK +A+R Q+FEK
Sbjct: 381 DRYITDRFLPDKAIDLIDEAASRIRLKTFTAPPDLKEMEERVEKLGKEKEDAIRCQEFEK 440
Query: 301 AGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVS 360
A +RD E LK+++ + D+ + ++ +T+ VTE DI IV++WTGIPV +++
Sbjct: 441 AARIRDDEQKLKSELEKIRDQWHQKNQTKTD------TVTEDDIADIVASWTGIPVRRLA 494
Query: 361 TDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 420
+ES+RLLKME+TLHKRVIGQDEAVK+IS+AIRR RVGLK+P RP+ SFIF GPTGVGK+
Sbjct: 495 EEESERLLKMEDTLHKRVIGQDEAVKSISKAIRRGRVGLKDPKRPVGSFIFMGPTGVGKT 554
Query: 421 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 480
EL KALA FG E++MIR+DMSEFME+H+VSKL+GSPPGYVGY EGGQLTE VRR+PY+
Sbjct: 555 ELCKALAEAMFGDEKSMIRVDMSEFMEKHSVSKLVGSPPGYVGYDEGGQLTERVRRKPYS 614
Query: 481 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI 540
V+LFDEIEKAHPD+FN++LQILEDGRLTDS+GR VDF+NT++IMTSNVG+ I + +R+
Sbjct: 615 VLLFDEIEKAHPDIFNILLQILEDGRLTDSQGRVVDFRNTIIIMTSNVGARTITE-PKRL 673
Query: 541 GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 600
GF DE +Y +KS V ELK+ FRPEFLNR+D++IVF L+K +KEI +ML
Sbjct: 674 GFSASNDESAKNYEDMKSNVMSELKKMFRPEFLNRIDDIIVFHPLSKENIKEIVRLMLDV 733
Query: 601 VFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEG 660
+ +RLK +I ++V+E + ++G++P +GARPLRRAI ++ED +AE ML ++K G
Sbjct: 734 LVNRLKANEIIMEVSEEAMGYLAQKGFDPVFGARPLRRAIQSMVEDKLAEDMLEGKVKAG 793
Query: 661 DSVIVDVDSDGNVTV 675
DS+ +D+D + V +
Sbjct: 794 DSIRIDLDGENIVVI 808
>gi|365157357|ref|ZP_09353630.1| chaperone ClpB [Bacillus smithii 7_3_47FAA]
gi|363625258|gb|EHL76300.1| chaperone ClpB [Bacillus smithii 7_3_47FAA]
Length = 811
Score = 837 bits (2162), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/666 (60%), Positives = 529/666 (79%), Gaps = 10/666 (1%)
Query: 5 STEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKN 64
S E G G + N PTL+ +LT +A +GKLDPV+GR +I+RV+++L RRTKN
Sbjct: 144 SNETNGHASGSSAHAN-TPTLDSLARDLTAIARDGKLDPVIGRSKEIQRVIEVLSRRTKN 202
Query: 65 NPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLK 124
NP LIGEPGVGKTAIAEGLAQ+I + +VP+T+ K+V+TLDMG +VAGTKYRGEFE+RLK
Sbjct: 203 NPVLIGEPGVGKTAIAEGLAQQIVNNEVPETLRDKRVMTLDMGTVVAGTKYRGEFEDRLK 262
Query: 125 KLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRK 184
K+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKP+LARGELQCIGATTLDEYRK
Sbjct: 263 KVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPALARGELQCIGATTLDEYRK 322
Query: 185 HIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYI 244
+IEKD ALERRFQP++V EP+++E+IQILKGLR+RYE HH++ TDEA+ +A +LS +YI
Sbjct: 323 YIEKDAALERRFQPIQVDEPTIEESIQILKGLRDRYEAHHRVSITDEAIEAAVKLSDRYI 382
Query: 245 SDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGEL 304
SDRFLPDKAIDLIDEAGS+VRLR P +ELE++L +I KEK+ AV+ Q+FEKA L
Sbjct: 383 SDRFLPDKAIDLIDEAGSKVRLRSFTTPPNLKELEQKLEEIRKEKDAAVQSQEFEKAASL 442
Query: 305 RDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDES 364
RD E L+ Q+ KE E VT DI +VS+WTGIPV K++ E+
Sbjct: 443 RDAEQKLREQLEETKKSWKEKQGKENSE------VTVEDIATVVSSWTGIPVSKLAQTET 496
Query: 365 DRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAK 424
+RLL +EE LH RVIGQ+EAVKA+++A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+
Sbjct: 497 ERLLNLEEILHSRVIGQEEAVKAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELAR 556
Query: 425 ALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLF 484
ALA FG E+AMIR+DMSE+ME+H+ S+L+GSPPGYVG+ EGGQLTE VRR+PY+V+L
Sbjct: 557 ALAEAMFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGFEEGGQLTEKVRRKPYSVILL 616
Query: 485 DEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDL 544
DEIEKAHPDVFN++LQ+LEDGRLTDSKGRTVDF+NT+LIMTSNVG+ ++K + +GF++
Sbjct: 617 DEIEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTVLIMTSNVGAEALKK-NKYVGFNI 675
Query: 545 DYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDR 604
E++ + +K V EELK+ FRPEFLNR+DE+IVF L K ++K+I +M ++ R
Sbjct: 676 QDGEQE--FKDMKGKVLEELKRAFRPEFLNRIDEIIVFHSLEKDQLKQIVSLMSDQLTKR 733
Query: 605 LKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVI 664
LK + IEL++T++ +E++ EEGY+P YGARPLRRAI + +ED ++E++L I G +V+
Sbjct: 734 LKEQHIELELTDKAKEKIAEEGYDPEYGARPLRRAIQKHIEDRLSEELLKGNIHPGQNVV 793
Query: 665 VDVDSD 670
+DV+++
Sbjct: 794 IDVENN 799
>gi|302390639|ref|YP_003826460.1| ATPase AAA [Thermosediminibacter oceani DSM 16646]
gi|302201267|gb|ADL08837.1| ATPase AAA-2 domain protein [Thermosediminibacter oceani DSM 16646]
Length = 814
Score = 837 bits (2161), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/657 (62%), Positives = 543/657 (82%), Gaps = 9/657 (1%)
Query: 14 GGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPG 73
G SGN PTL ++ +LT+LA EGKLDPV+GRQ +IERV+Q+L RRTKNNPCLIGEPG
Sbjct: 151 GFRKSGN-TPTLNQFSRDLTELAAEGKLDPVIGRQKEIERVIQVLTRRTKNNPCLIGEPG 209
Query: 74 VGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQS 133
VGKTAI EGLAQRI G+VP+ ++ K++++LD+ LVAGTK+RGEFEERLKK++ E+KQ+
Sbjct: 210 VGKTAIVEGLAQRIVEGEVPEILKDKRIVSLDLASLVAGTKFRGEFEERLKKVINEVKQA 269
Query: 134 DEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALE 193
+ILFIDE+HT+IGAGAAEGAIDA+NILKPSLARGELQ IGATTLDEYRKH+EKDPALE
Sbjct: 270 GNVILFIDEMHTIIGAGAAEGAIDASNILKPSLARGELQTIGATTLDEYRKHVEKDPALE 329
Query: 194 RRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKA 253
RRFQP+ V EPSV++TI+IL+GLR++YE HH+++ +DEALV+AA+LS +YI+DR+LPDKA
Sbjct: 330 RRFQPIIVEEPSVEDTIKILEGLRDKYEAHHRVKISDEALVAAAKLSARYITDRYLPDKA 389
Query: 254 IDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKA 313
+DLIDEA SRVRL+ P E +ELE EL + KEK+ A+R Q+FEKA LRD+E ++KA
Sbjct: 390 VDLIDEAASRVRLQSLTAPPELKELEDELDAVRKEKDAAIRAQEFEKAARLRDKEHEIKA 449
Query: 314 QISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEET 373
++ +L + ++ K E VT DI IVS WTGIPVE+++ +ES+RLL+MEE
Sbjct: 450 KVDSLKTRWQQEKKLEN------ATVTAADIAGIVSNWTGIPVERMTEEESERLLRMEEI 503
Query: 374 LHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGS 433
LH+RVIGQDEAV+A++RAIRRAR GLK+P RP+ SFIF GPTGVGK+ELA+ALA FG
Sbjct: 504 LHQRVIGQDEAVEAVARAIRRARAGLKDPRRPVGSFIFLGPTGVGKTELARALAEAMFGD 563
Query: 434 EEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPD 493
E+AMIRLDMSE+ME+ VS++IG+PPGYVGY EGG+LTE VRR+PY+V+LFDEIEKAHPD
Sbjct: 564 EDAMIRLDMSEYMEKFAVSRMIGAPPGYVGYEEGGELTEKVRRKPYSVILFDEIEKAHPD 623
Query: 494 VFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSY 553
VFN++LQILEDGRLTD++GRTVDFKNT++IMTSNVG+++I++ R +GF DE+ +Y
Sbjct: 624 VFNILLQILEDGRLTDAQGRTVDFKNTVIIMTSNVGANLIQR-ARTLGFT-PRDEETKNY 681
Query: 554 NRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQ 613
+ +K V EEL++ FRPEF+NR+DE+IVF L + +K+I D+MLK+V +RLK DI ++
Sbjct: 682 SEMKDRVLEELRRTFRPEFINRVDEIIVFHPLNEEHMKKIVDLMLKQVNERLKENDISIE 741
Query: 614 VTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSD 670
V++R +E +V++G++P YGARPLRR I + +ED+++E++L + +GD+V+VDV D
Sbjct: 742 VSDRAKEWLVKKGFDPMYGARPLRRVIQKEVEDNLSEEILKGNVSQGDTVLVDVQDD 798
>gi|296131785|ref|YP_003639032.1| ATPase AAA [Thermincola potens JR]
gi|296030363|gb|ADG81131.1| ATPase AAA-2 domain protein [Thermincola potens JR]
Length = 810
Score = 836 bits (2160), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/675 (62%), Positives = 538/675 (79%), Gaps = 11/675 (1%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
M+G + G G N PTL E+G +LT++A EGKLDPVVGR+ +IERVVQ+L R
Sbjct: 141 MLGTAQPHGGPAQPGKKQAN-TPTLNEFGRDLTEMAREGKLDPVVGREKEIERVVQVLSR 199
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNP LIGEPGVGKTAIAEGLAQRI +G+VP+T+ K+V+TLDM +VAGTK+RGEFE
Sbjct: 200 RTKNNPVLIGEPGVGKTAIAEGLAQRIIAGNVPETLNDKRVVTLDMASVVAGTKFRGEFE 259
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
+RLKK+++EI+ + +ILFIDE+HTLIGAGAAEGAIDAANILKP+LARGELQCIGATTLD
Sbjct: 260 DRLKKVIDEIRAAGNVILFIDELHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLD 319
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRKHIE+DPALERRFQP+ V EP+V+E+I ILKGLR+RYE HH+++ TDEA+ SA +LS
Sbjct: 320 EYRKHIERDPALERRFQPITVDEPTVEESIDILKGLRDRYEAHHRVQITDEAINSAVRLS 379
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
+YI+DRFLPDKAIDLIDEA SRVRL+ +P + ++LE EL +I KEK A+ Q+FEK
Sbjct: 380 DRYITDRFLPDKAIDLIDEAASRVRLQTFTVPPDVKKLEAELEEIKKEKEAAISAQEFEK 439
Query: 301 AGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVS 360
A LRD+E LKA++ KG E K G VTE DI HIVS+WTGIPV K++
Sbjct: 440 AAGLRDKEQKLKAKLED-TKKGWEEKK-----GLAKKAVTEDDIAHIVSSWTGIPVSKLA 493
Query: 361 TDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 420
+E+ RLL MEE LH+RVIGQDEAVKA+SRA+RRAR GLK+P RPI SFIF GPTGVGK+
Sbjct: 494 QEETTRLLNMEEILHQRVIGQDEAVKAVSRAVRRARAGLKDPKRPIGSFIFLGPTGVGKT 553
Query: 421 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 480
ELA+ALA FG E+AM+R+DMSE+ME+H VS+L+G+PPGYVGY EGGQLTEAVRR+PY+
Sbjct: 554 ELARALAEALFGDEDAMVRIDMSEYMEKHAVSRLVGAPPGYVGYDEGGQLTEAVRRKPYS 613
Query: 481 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI 540
VVL DEIEKAHP+VFN++LQ+LEDGRLTD+KGRTVDF+NT++IMTSNVG+ +I+K +
Sbjct: 614 VVLLDEIEKAHPEVFNILLQVLEDGRLTDAKGRTVDFRNTVIIMTSNVGAHLIKKEA-TL 672
Query: 541 GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 600
GF +D++Y+ ++ VT ELK+ FRPEFLNR+DE+IVF L K +K+I ++MLKE
Sbjct: 673 GF--KTTAQDTNYDNMRERVTGELKRTFRPEFLNRIDEIIVFHSLKKEHIKKIVELMLKE 730
Query: 601 VFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEG 660
V +R+K DIE++VT+ +E + +EG++ +GARPLRRAI + +ED ++E+ L K G
Sbjct: 731 VAERMKENDIEIEVTDEAKELLAKEGFDEMFGARPLRRAIQKTVEDQLSEEFLKGTFKPG 790
Query: 661 DSVIVDVDSDGNVTV 675
D V+V DG + V
Sbjct: 791 DKVVVTA-KDGQIVV 804
>gi|428223611|ref|YP_007107708.1| ATPase [Geitlerinema sp. PCC 7407]
gi|427983512|gb|AFY64656.1| ATPase AAA-2 domain protein [Geitlerinema sp. PCC 7407]
Length = 822
Score = 836 bits (2159), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/652 (62%), Positives = 531/652 (81%), Gaps = 10/652 (1%)
Query: 25 LEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLA 84
LE +G NLT A G+LDP+VGR+ ++ERVVQILGRRTKNNP L+G+PGVGKTAIAEGLA
Sbjct: 167 LETFGINLTMRAIAGELDPMVGREAEVERVVQILGRRTKNNPILLGDPGVGKTAIAEGLA 226
Query: 85 QRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVH 144
QRI +GDVP+ + +++I+L MG L+AG ++RGEFEERL +++ E++Q+ +I+FIDE+H
Sbjct: 227 QRIVNGDVPEILRDRQIISLAMGTLMAGARFRGEFEERLTQILAEVRQAGNVIVFIDEIH 286
Query: 145 TLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEP 204
+L+GAGA G +DA+N+LKP+LARGELQCIGATTLDEYR+HIE+D ALERRFQPVKV P
Sbjct: 287 SLVGAGATAGGLDASNLLKPALARGELQCIGATTLDEYRQHIEQDAALERRFQPVKVEAP 346
Query: 205 SVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRV 264
++ ETI+IL GLR+RYE HH L ++EALV+AA+LS +YI DR LPDKAIDLIDEAGSRV
Sbjct: 347 TLTETIEILWGLRDRYEQHHHLTISNEALVAAARLSDRYIPDRHLPDKAIDLIDEAGSRV 406
Query: 265 RLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKE 324
RLRH + A+ + ++LR +T EK AV QDF++AG+LRDRE+ L+ ++ +
Sbjct: 407 RLRHTR-HSPAQRIRQDLRAVTAEKEAAVTAQDFDQAGKLRDRELALQQTLA-------D 458
Query: 325 MSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEA 384
+ A+ +A + PVVT DI ++SAWTGIPV ++ ES L+ +E+TLH+RVIGQ EA
Sbjct: 459 LRTAQRDA-EPRPVVTAEDIAQVISAWTGIPVNHLTESESLMLMHLEDTLHERVIGQQEA 517
Query: 385 VKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSE 444
V A +RAIRR+RVGL +P+RPIAS +FSGPTGVGK+ELAKALAA FGSEEAMIRLDMSE
Sbjct: 518 VTAAARAIRRSRVGLGSPHRPIASLLFSGPTGVGKTELAKALAATVFGSEEAMIRLDMSE 577
Query: 445 FMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILED 504
FME HTVSKLIGSPPG+VGY EGGQLTEAVRR+PYTV+L DEIEKAHPDVFN++LQ+LED
Sbjct: 578 FMEAHTVSKLIGSPPGFVGYDEGGQLTEAVRRKPYTVLLLDEIEKAHPDVFNLLLQLLED 637
Query: 505 GRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSS-YNRIKSLVTEE 563
GRLTD++GR V FKNTL+I+TSN+GS IEK G +GF DE +++ Y R++S V EE
Sbjct: 638 GRLTDARGRVVSFKNTLIILTSNLGSRAIEKNGLGLGFAATGDEAETAQYQRVRSQVNEE 697
Query: 564 LKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVV 623
LKQYFRPEFLNRLDE+IVFR+LT+ E+ ++A+++++EV DRL + I L +T+ + R++
Sbjct: 698 LKQYFRPEFLNRLDEIIVFRRLTRDELAQVAELLIREVGDRLSEQGITLVLTDAVKHRLI 757
Query: 624 EEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTV 675
+EGY+PSYGARPLRRA+ RL+ED +AE MLA ++ GD+ ++D+D DG V V
Sbjct: 758 DEGYSPSYGARPLRRAVTRLVEDHLAEAMLAGQLHSGDTAVLDLDDDGQVQV 809
>gi|239825665|ref|YP_002948289.1| ATPase AAA [Geobacillus sp. WCH70]
gi|239805958|gb|ACS23023.1| ATPase AAA-2 domain protein [Geobacillus sp. WCH70]
Length = 811
Score = 835 bits (2158), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/673 (60%), Positives = 533/673 (79%), Gaps = 10/673 (1%)
Query: 5 STEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKN 64
S E+V GGG+S PTL+ +LT +A EG+LDPV+GR +I+RV+++L RRTKN
Sbjct: 144 SNESVSGHSGGGASHVSTPTLDSLARDLTAIAREGRLDPVIGRSKEIQRVIEVLSRRTKN 203
Query: 65 NPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLK 124
NP LIGEPGVGKTAIAEGLAQ+I + +VP+T+ K+V+TLDMG +VAGTKYRGEFE+RLK
Sbjct: 204 NPVLIGEPGVGKTAIAEGLAQQIVNNEVPETLRDKRVMTLDMGTVVAGTKYRGEFEDRLK 263
Query: 125 KLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRK 184
K+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKP+LARGELQCIGATTLDEYRK
Sbjct: 264 KVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPALARGELQCIGATTLDEYRK 323
Query: 185 HIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYI 244
+IEKD ALERRFQP+ V EP+V+E+IQILKGLR+RYE HH++ +DEA++ A +LS +YI
Sbjct: 324 YIEKDAALERRFQPIYVDEPTVEESIQILKGLRDRYEAHHRVSISDEAIIQAVKLSDRYI 383
Query: 245 SDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGEL 304
+DRFLPDKAIDLIDEA S+VRLR P + +ELE++L ++ KEK+ AV+ Q+FEKA L
Sbjct: 384 TDRFLPDKAIDLIDEACSKVRLRSFTAPPQLKELEQKLEEVRKEKDAAVQSQEFEKAASL 443
Query: 305 RDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDES 364
RD E L+ ++ KE E VT DI +VS+WTGIPV K++ E+
Sbjct: 444 RDMEQRLREELEETKRAWKEKQGQENSE------VTVEDIAMVVSSWTGIPVSKLAQTET 497
Query: 365 DRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAK 424
+RLLK+EE LH RV+GQDEAVKA+++A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+
Sbjct: 498 ERLLKLEEILHSRVVGQDEAVKAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELAR 557
Query: 425 ALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLF 484
ALA FG E+A+IR+DMSE+ME+H+ S+LIGSPPGYVGY EGGQLTE VRR+PY+VVL
Sbjct: 558 ALAEAMFGDEDALIRIDMSEYMEKHSTSRLIGSPPGYVGYEEGGQLTEKVRRKPYSVVLL 617
Query: 485 DEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDL 544
DE+EKAHPDVFN++LQ+LEDGRLTDSKGRTVDF+NT++IMTSNVG+ +++ + +GF++
Sbjct: 618 DEMEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTIIIMTSNVGADALKR-NKYVGFNI 676
Query: 545 DYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDR 604
++D Y +K V +ELK+ FRPEFLNR+DE+IVF L K +KEI +M +++ R
Sbjct: 677 --QDEDQKYKDMKGKVMDELKKAFRPEFLNRIDEIIVFHSLEKQHLKEIVKLMAEQLVKR 734
Query: 605 LKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVI 664
LK +DI+L++T+ E++V EGY+P YGARPLRRA+ + +ED ++E++L I +G V+
Sbjct: 735 LKEQDIDLELTDAAIEKIVSEGYDPEYGARPLRRALQKHVEDRLSEELLKGTIAKGQKVV 794
Query: 665 VDVDSDGNVTVLN 677
VDV DG VL+
Sbjct: 795 VDV-KDGEFVVLS 806
>gi|415886308|ref|ZP_11548131.1| Class III stress response-related ATPase, ClpC [Bacillus
methanolicus MGA3]
gi|387588961|gb|EIJ81282.1| Class III stress response-related ATPase, ClpC [Bacillus
methanolicus MGA3]
Length = 814
Score = 835 bits (2158), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/671 (61%), Positives = 525/671 (78%), Gaps = 11/671 (1%)
Query: 5 STEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKN 64
S E+ G G S N PTL+ +LT +A EG LDPV+GR +I+RV+++L RRTKN
Sbjct: 144 SNESGGHQSGTAVSAN-TPTLDSLARDLTAIAREGSLDPVIGRSKEIQRVIEVLSRRTKN 202
Query: 65 NPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLK 124
NP LIGEPGVGKTAIAEGLAQ+I + +VP+ + K+V+TLDMG +VAGTKYRGEFE+RLK
Sbjct: 203 NPVLIGEPGVGKTAIAEGLAQQIVNNEVPEILRDKRVMTLDMGTVVAGTKYRGEFEDRLK 262
Query: 125 KLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRK 184
K+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTLDEYRK
Sbjct: 263 KVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEYRK 322
Query: 185 HIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYI 244
+IEKD ALERRFQP+ V EP+ +E+IQILKGLR+RYE HH++ TDEA+ +A +LS +YI
Sbjct: 323 YIEKDAALERRFQPIMVDEPTPEESIQILKGLRDRYEAHHRVSITDEAIDAAVKLSDRYI 382
Query: 245 SDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGEL 304
SDRFLPDKAIDLIDEAGS+VRLR P +ELE +L ++ KEK+ AV+ Q+FEKA L
Sbjct: 383 SDRFLPDKAIDLIDEAGSKVRLRSYTTPPNLKELEMKLEEVRKEKDAAVQSQEFEKAASL 442
Query: 305 RDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDES 364
RD E L+ Q+ KE + G VT DI +VS+WTGIPV K++ E+
Sbjct: 443 RDTEQRLREQLEETKKSWKE------KQGQENSEVTVEDIASVVSSWTGIPVSKLAETET 496
Query: 365 DRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAK 424
++LLK+EE LH RVIGQ+EAVKAIS+A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+
Sbjct: 497 EKLLKLEEILHSRVIGQEEAVKAISKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELAR 556
Query: 425 ALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLF 484
ALA FG E+AMIR+DMSE+ME+H+ S+L+GSPPGYVGY EGGQLTE VRR+PY+V+L
Sbjct: 557 ALAEAMFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPYSVILL 616
Query: 485 DEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDL 544
DEIEKAHPDVFN++LQ+LEDGRLTDSKGRTVDF+NT+LIMTSNVG+ +++ + +GF++
Sbjct: 617 DEIEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTVLIMTSNVGAEALKR-NKYVGFNI 675
Query: 545 DYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDR 604
E+D Y +K V EELK+ FRPEFLNR+DE+IVF L K ++EI +M ++ R
Sbjct: 676 QDGEQD--YKDMKGKVMEELKKAFRPEFLNRIDEIIVFHALEKKHLREIVTLMANQLMKR 733
Query: 605 LKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVI 664
LK +DI L++T+ +E++ EEGY+P YGARPLRRAI + +ED ++E++L + G V+
Sbjct: 734 LKEQDIHLELTDAAKEKIAEEGYDPEYGARPLRRAIQKHIEDRLSEELLKGAVLTGQHVV 793
Query: 665 VDVDSDGNVTV 675
+DV+ DG V
Sbjct: 794 IDVE-DGEFVV 803
>gi|403743591|ref|ZP_10953143.1| ATPase AAA-2 domain-containing protein [Alicyclobacillus hesperidum
URH17-3-68]
gi|403122621|gb|EJY56826.1| ATPase AAA-2 domain-containing protein [Alicyclobacillus hesperidum
URH17-3-68]
Length = 810
Score = 835 bits (2158), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/657 (61%), Positives = 527/657 (80%), Gaps = 10/657 (1%)
Query: 14 GGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPG 73
G S PTL+ +LT++A +GKLDPV+GR +IERV+Q+L RRTKNNP LIGEPG
Sbjct: 150 GDKDSSVGTPTLDSLARDLTQMARDGKLDPVIGRANEIERVIQVLSRRTKNNPVLIGEPG 209
Query: 74 VGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQS 133
VGKTAIAEGLAQRI +GD+P+T+ K+V+ LDMG +VAGTKYRGEFE+RLKK+M+EI+Q+
Sbjct: 210 VGKTAIAEGLAQRIVAGDIPETLRNKRVMVLDMGTVVAGTKYRGEFEDRLKKIMDEIRQA 269
Query: 134 DEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALE 193
IILFIDE+HTLIGAG AEGAIDA+NILKP+LARGELQCIGATTLDEYRKHIEKD ALE
Sbjct: 270 GNIILFIDELHTLIGAGGAEGAIDASNILKPALARGELQCIGATTLDEYRKHIEKDAALE 329
Query: 194 RRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKA 253
RRFQP+ V +PS +E ++IL+GLR+RYE HH+++ TDEAL +A ++S +YISDRFLPDKA
Sbjct: 330 RRFQPITVDQPSPEEALEILRGLRDRYEAHHRVKITDEALEAAVRMSDRYISDRFLPDKA 389
Query: 254 IDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKA 313
IDLIDEAGSRVRLR P +ELE++L ++ EK+ AV+ Q+FE+A LRD+E +K
Sbjct: 390 IDLIDEAGSRVRLRTHTAPPNLKELEQKLEKVRSEKDAAVQSQEFEQAASLRDQEQKIKQ 449
Query: 314 QISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEET 373
++ L KE + + DV VT DI H+V+AWTGIPV++++ +ES+RLL ME+
Sbjct: 450 ELEQL----KERWQQTQQHDDVR--VTADDIAHVVAAWTGIPVKQLAQEESERLLHMEQL 503
Query: 374 LHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGS 433
LH+RVIGQDEAV+A+SRAIRRAR GLK+P RPI SFIF GPTGVGK+ELA+ALA FG
Sbjct: 504 LHERVIGQDEAVQAVSRAIRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGD 563
Query: 434 EEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPD 493
E+A+IR+DMSEFMERHT S+L+GSPPGYVGY EGGQLTE VRR+PY+VVL DEIEKAHP+
Sbjct: 564 EDALIRIDMSEFMERHTTSRLVGSPPGYVGYEEGGQLTEKVRRKPYSVVLLDEIEKAHPE 623
Query: 494 VFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSY 553
VFN++LQ+L+DGRLTD KGRTVDF+NT++IMTSNVG+ + KGG +GF D + S Y
Sbjct: 624 VFNILLQVLDDGRLTDGKGRTVDFRNTVIIMTSNVGAEELRKGG-SVGFKRD---ESSRY 679
Query: 554 NRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQ 613
+K V ++LK+ FRPEFLNR+DE+IVF L + + I D+M+ + RLK ++IE
Sbjct: 680 LDMKDKVMQDLKKTFRPEFLNRIDEIIVFHSLDEDHIGRIVDMMVHNLQRRLKEQEIEFT 739
Query: 614 VTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSD 670
+T+ ++ + +EG++P YGARPL+RAI+R +ED ++E +L+ +IK+GDSV++ +D D
Sbjct: 740 LTDEAKKFLSKEGFDPQYGARPLQRAIVRHIEDRLSEALLSGQIKKGDSVVLGLDGD 796
>gi|332981035|ref|YP_004462476.1| ATPase AAA-2 domain-containing protein [Mahella australiensis 50-1
BON]
gi|332698713|gb|AEE95654.1| ATPase AAA-2 domain protein [Mahella australiensis 50-1 BON]
Length = 815
Score = 835 bits (2157), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/660 (62%), Positives = 525/660 (79%), Gaps = 7/660 (1%)
Query: 10 GAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLI 69
GA G P L+++G +LT+LA EGKLDPV+GR+ +IERV+QIL RRTKNNPCLI
Sbjct: 149 GAPQKGQPKNTNTPNLDQFGRDLTELAREGKLDPVIGREKEIERVIQILSRRTKNNPCLI 208
Query: 70 GEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEE 129
GEPGVGKTAIAEGLAQ+IA G+VP+ ++ K+V+ LD+ +VAGTKYRGEFEERLK ++ E
Sbjct: 209 GEPGVGKTAIAEGLAQQIAEGNVPELLKDKRVVALDLPAMVAGTKYRGEFEERLKNVLNE 268
Query: 130 IKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKD 189
+K++ IILFIDE+HT+IGAGAAEGAIDA+NILKP+LARGE+Q IGATTLDEYRKH+E D
Sbjct: 269 VKKAGNIILFIDELHTVIGAGAAEGAIDASNILKPALARGEMQAIGATTLDEYRKHVEGD 328
Query: 190 PALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFL 249
PALERRFQPV V EPS D+ + ILKGLR++YE +H++R TDEAL +A LS +YI+DR+L
Sbjct: 329 PALERRFQPVVVGEPSRDDALLILKGLRDKYEAYHRVRITDEALEAAVDLSMRYITDRYL 388
Query: 250 PDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREM 309
PDKAIDLIDEA +RV+LR P++ +ELE +L I KEK EAV QD+EKA +LRD E
Sbjct: 389 PDKAIDLIDEAAARVKLRTVTPPDDIKELEDKLEDIRKEKEEAVANQDYEKAAKLRDDEQ 448
Query: 310 DLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLK 369
LK +I L K S A T A VVT DI IVS+W+G+PV++++ ES+RLL
Sbjct: 449 KLKEEIEKL--KESWSSNANTTAA----VVTAEDIAQIVSSWSGVPVKQLTEAESERLLN 502
Query: 370 MEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAY 429
+E+ LH+RVIGQDEAV+A+++AIRRAR GLK+P RPI SFIF GPTGVGK+ELA+ALA
Sbjct: 503 LEKILHERVIGQDEAVEAVAKAIRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAEA 562
Query: 430 YFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEK 489
FG E AM+R+DMSE+ME+++VS+LIGSPPGYVGY EGGQLTE VRR+PYTVVLFDEIEK
Sbjct: 563 MFGDENAMVRIDMSEYMEKYSVSRLIGSPPGYVGYEEGGQLTEHVRRKPYTVVLFDEIEK 622
Query: 490 AHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEK 549
AHPDVFN++LQILEDGRLTD KGRTVDF+NT++IMTSN G+ +I K + +GF DE
Sbjct: 623 AHPDVFNILLQILEDGRLTDGKGRTVDFRNTVIIMTSNAGAHLITK-QKSLGFSGGQDES 681
Query: 550 DSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKD 609
+ Y +IK V EEL++ FRPEFLNR+DE+IVF L + ++ I D+MLK+V RL K+
Sbjct: 682 KTEYEKIKDNVMEELRRTFRPEFLNRVDEIIVFHPLDEENLRAIVDLMLKDVGKRLAEKN 741
Query: 610 IELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDS 669
I ++VT R+ + +EG++P YGARPLRRAI R++ED+++E++L I GDSVI DV++
Sbjct: 742 IYMEVTPAARDYLAKEGFDPIYGARPLRRAIQRMVEDNLSEELLKGTIAPGDSVIADVEN 801
>gi|410666747|ref|YP_006919118.1| chaperone protein ClpB [Thermacetogenium phaeum DSM 12270]
gi|409104494|gb|AFV10619.1| chaperone protein ClpB [Thermacetogenium phaeum DSM 12270]
Length = 820
Score = 835 bits (2157), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/657 (61%), Positives = 528/657 (80%), Gaps = 7/657 (1%)
Query: 14 GGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPG 73
G ++ PTL+E G +LT+LA EGKLDPV+GR+ +IERV+Q+L RRTKNNPCLIGEPG
Sbjct: 157 GASRRASQTPTLDELGRDLTQLAREGKLDPVIGREQEIERVIQVLSRRTKNNPCLIGEPG 216
Query: 74 VGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQS 133
VGKTAIAEGLAQRI VP+ + K+V+TLDM +VAGTKYRGEFEERL+K+++EI+ +
Sbjct: 217 VGKTAIAEGLAQRIVENKVPEILADKRVVTLDMSSVVAGTKYRGEFEERLRKVIDEIRNA 276
Query: 134 DEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALE 193
IILFIDEVHTL+GAGAAEGAIDAANILKP+LARGELQCIGATTLDEYRK+IEKD ALE
Sbjct: 277 GNIILFIDEVHTLVGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKNIEKDAALE 336
Query: 194 RRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKA 253
RRFQPV V EP+V+ETI+IL+GLR+RYE HH+++ TD AL +AA+LS +YI+DRFLPDKA
Sbjct: 337 RRFQPVMVGEPTVEETIEILRGLRDRYEAHHRVKITDGALKAAARLSDRYITDRFLPDKA 396
Query: 254 IDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKA 313
IDL+DEA SRVRL+ P +ELE++L ++ KEK AV Q+FEKA LRD+E ++
Sbjct: 397 IDLMDEAASRVRLKAYTAPPAVKELEEKLERLQKEKESAVVSQEFEKAASLRDQEQQVRE 456
Query: 314 QISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEET 373
++ + K + + E + +VT+ DI I+S+WTGIPV K+ +ES+RLL+MEE
Sbjct: 457 ELEKI--KSNWVQRKELDQS----IVTDEDIAAIISSWTGIPVSKLQEEESERLLRMEEI 510
Query: 374 LHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGS 433
LH+RVIGQDEAVKA++RA+RR+R GLK+P RPI SFIF GPTGVGK+ELA+ALA FG
Sbjct: 511 LHQRVIGQDEAVKAVARAMRRSRAGLKDPKRPIGSFIFLGPTGVGKTELARALAEALFGD 570
Query: 434 EEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPD 493
EEAM+R DMSE+ME+HTVS+L+G+PPGYVGY E GQLTEAVRRRPY+VVLFDEIEKAHPD
Sbjct: 571 EEAMVRFDMSEYMEKHTVSRLLGAPPGYVGYEEAGQLTEAVRRRPYSVVLFDEIEKAHPD 630
Query: 494 VFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSY 553
+F+++LQ++EDGRLTD+KGRTVDF+NT++IMTSNVG+++I++ R+GF + + Y
Sbjct: 631 IFHVLLQVMEDGRLTDAKGRTVDFRNTVIIMTSNVGANLIKR-EHRLGFKAGERQDELDY 689
Query: 554 NRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQ 613
+K +T+EL++ FRPEFLNR+DE+IVF L + +K+I +MLK + R+ + L+
Sbjct: 690 EAMKERITDELRRTFRPEFLNRVDEIIVFHPLNEEHMKKIVGLMLKNISKRIAEYGLHLE 749
Query: 614 VTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSD 670
T+ E +V++GY+P++GARPLRR I R++ED ++E+MLA + K GD+V+VD D
Sbjct: 750 FTKEAEELLVKKGYDPTFGARPLRRVIQRMVEDELSEEMLAGKFKAGDAVLVDAGED 806
>gi|387928140|ref|ZP_10130818.1| Class III stress response-related ATPase, ClpC [Bacillus
methanolicus PB1]
gi|387587726|gb|EIJ80048.1| Class III stress response-related ATPase, ClpC [Bacillus
methanolicus PB1]
Length = 814
Score = 835 bits (2157), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/671 (61%), Positives = 526/671 (78%), Gaps = 11/671 (1%)
Query: 5 STEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKN 64
S E+ G G S N PTL+ +LT +A EG LDPV+GR +I+RV+++L RRTKN
Sbjct: 144 SNESGGHQSGTAVSAN-TPTLDSLARDLTAIAREGSLDPVIGRSKEIQRVIEVLSRRTKN 202
Query: 65 NPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLK 124
NP LIGEPGVGKTAIAEGLAQ+I + +VP+ + K+V+TLDMG +VAGTKYRGEFE+RLK
Sbjct: 203 NPVLIGEPGVGKTAIAEGLAQQIVNNEVPEILRDKRVMTLDMGTVVAGTKYRGEFEDRLK 262
Query: 125 KLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRK 184
K+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTLDEYRK
Sbjct: 263 KVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEYRK 322
Query: 185 HIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYI 244
+IEKD ALERRFQP+ V EP+ +E+IQILKGLR+RYE HH++ TDEA+ +A +LS +YI
Sbjct: 323 YIEKDAALERRFQPIMVDEPTPEESIQILKGLRDRYEAHHRVSITDEAIDAAVKLSDRYI 382
Query: 245 SDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGEL 304
SDRFLPDKAIDLIDEAGS+VRLR P +ELE +L ++ KEK+ AV+ Q+FEKA L
Sbjct: 383 SDRFLPDKAIDLIDEAGSKVRLRSFTTPPNLKELEMKLEEVRKEKDAAVQSQEFEKAASL 442
Query: 305 RDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDES 364
RD E L+ Q+ KE + G VT DI +VS+WTGIPV K++ E+
Sbjct: 443 RDTEQRLREQLEETKKSWKE------KQGQENSEVTVEDIASVVSSWTGIPVSKLAQTET 496
Query: 365 DRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAK 424
++LLK+EE LH RVIGQ+EAVKAIS+A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+
Sbjct: 497 EKLLKLEEILHSRVIGQEEAVKAISKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELAR 556
Query: 425 ALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLF 484
ALA FG E+AMIR+DMSE+ME+H+ S+L+GSPPGYVGY EGGQLTE VRR+PY+V+L
Sbjct: 557 ALAEAMFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPYSVILL 616
Query: 485 DEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDL 544
DEIEKAHPDVFN++LQ+LEDGRLTDSKGRTVDF+NT+LIMTSNVG+ +++ + +GF++
Sbjct: 617 DEIEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTVLIMTSNVGAEALKR-NKYVGFNI 675
Query: 545 DYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDR 604
E+D Y +K V EELK+ FRPEFLNR+DE+IVF L K ++EI +M +++ R
Sbjct: 676 QDGEQD--YKDMKGKVMEELKKAFRPEFLNRIDEIIVFHALEKKHLREIVSLMAEQLMKR 733
Query: 605 LKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVI 664
LK +DI L++T+ +E++ EEGY+P YGARPLRRAI + +ED ++E++L + G V+
Sbjct: 734 LKEQDIHLELTDAAKEKIAEEGYDPEYGARPLRRAIQKHIEDRLSEELLKGAVLTGQRVV 793
Query: 665 VDVDSDGNVTV 675
+DV+ DG V
Sbjct: 794 IDVE-DGEFVV 803
>gi|332800110|ref|YP_004461609.1| ATPase AAA-2 domain-containing protein [Tepidanaerobacter
acetatoxydans Re1]
gi|438003416|ref|YP_007273159.1| ATP-dependent Clp protease, ATP-binding subunit ClpC / Negative
regulator of genetic competence clcC/mecB
[Tepidanaerobacter acetatoxydans Re1]
gi|332697845|gb|AEE92302.1| ATPase AAA-2 domain protein [Tepidanaerobacter acetatoxydans Re1]
gi|432180210|emb|CCP27183.1| ATP-dependent Clp protease, ATP-binding subunit ClpC / Negative
regulator of genetic competence clcC/mecB
[Tepidanaerobacter acetatoxydans Re1]
Length = 813
Score = 835 bits (2156), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/647 (62%), Positives = 524/647 (80%), Gaps = 8/647 (1%)
Query: 14 GGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPG 73
G PTL ++G +LT+LA EGKLDPVVGR+ +IERV+Q+L RRTKNNPCLIGEPG
Sbjct: 149 GSYKKSANTPTLNQFGRDLTELAAEGKLDPVVGREKEIERVIQVLTRRTKNNPCLIGEPG 208
Query: 74 VGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQS 133
VGKTA+ EGLAQ+I +VP+ ++ K+V++LDM LVAGTK+RGEFEERLKK+M EIKQ+
Sbjct: 209 VGKTAVVEGLAQQIIEQNVPEILKDKRVVSLDMASLVAGTKFRGEFEERLKKVMTEIKQA 268
Query: 134 DEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALE 193
+ILFIDE+HT+IGAGAAEGAIDA+NILKP+LARGE+Q IGATT+DEYRK++EKDPALE
Sbjct: 269 GNVILFIDEMHTIIGAGAAEGAIDASNILKPALARGEIQTIGATTIDEYRKYVEKDPALE 328
Query: 194 RRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKA 253
RRFQP+ V EP+V+ETIQILKGLR+RYE HH+++ +DEA+ +AA+LSY+YI+DRFLPDKA
Sbjct: 329 RRFQPIMVEEPTVEETIQILKGLRDRYEAHHRVKISDEAIEAAAKLSYRYITDRFLPDKA 388
Query: 254 IDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKA 313
IDLIDEA SRVRL+ P E RE+E +L I KEK+ A+R Q+FEKA LRD+E ++KA
Sbjct: 389 IDLIDEAASRVRLKTLTAPPELREMEDKLEAIRKEKDAAIRAQEFEKAASLRDKEQEVKA 448
Query: 314 QISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEET 373
++ L + ++ K E V E DI HIV+ WTGIPV++++ +ES+RLLK+EE
Sbjct: 449 EVEKLKELWQKDYKFENS------TVKEEDIAHIVAIWTGIPVKRLTEEESERLLKLEEV 502
Query: 374 LHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGS 433
LH RVIGQDEAVKA+++AIRRA GLK+P RPI SFIF GPTGVGK+ELA+ALA FG
Sbjct: 503 LHNRVIGQDEAVKAVAKAIRRAYAGLKDPARPIGSFIFLGPTGVGKTELARALADAMFGD 562
Query: 434 EEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPD 493
E+AMIRLDMSE+ME+ VS+++G+PPGYVGY EGG+LTE VRRRPY+V+LFDEIEKAHPD
Sbjct: 563 EDAMIRLDMSEYMEKFAVSRIVGAPPGYVGYEEGGELTEKVRRRPYSVILFDEIEKAHPD 622
Query: 494 VFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSY 553
VFN++LQILEDGRLTD+KGRTVDF+NT+LIMTSNVG+++I+K + +GF E++ SY
Sbjct: 623 VFNILLQILEDGRLTDAKGRTVDFRNTILIMTSNVGANLIQK-PKVLGF-APVQEEEKSY 680
Query: 554 NRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQ 613
+K +V ELK+ F+PEFLNR+DE+IVF L++ ++EI +M+ EV RL K I ++
Sbjct: 681 AEMKDMVLNELKRTFKPEFLNRIDEIIVFHPLSEEHIREIVTLMIDEVNRRLTEKQISIE 740
Query: 614 VTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEG 660
VT++ ++ + +EGY+P YGARPLRR I + +ED ++E+ML I +G
Sbjct: 741 VTDKAKDVLAKEGYDPMYGARPLRRVIQKRIEDRLSEEMLKGSITDG 787
>gi|205372096|ref|ZP_03224913.1| class III stress response-related ATPase [Bacillus coahuilensis
m4-4]
Length = 816
Score = 835 bits (2156), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/655 (61%), Positives = 518/655 (79%), Gaps = 9/655 (1%)
Query: 14 GGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPG 73
GGG++G PTL+ +LT +A EG LDPV+GR +I+RV+++L RRTKNNP LIGEPG
Sbjct: 152 GGGNAGANTPTLDSLARDLTAIAREGSLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPG 211
Query: 74 VGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQS 133
VGKTAIAEGLAQ+I +VP+ + K+V+TLDMG +VAGTKYRGEFE+RLKK+M+EI+Q+
Sbjct: 212 VGKTAIAEGLAQQIIQNEVPEILRDKRVMTLDMGTVVAGTKYRGEFEDRLKKVMDEIRQA 271
Query: 134 DEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALE 193
IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTLDEYRK+IEKD ALE
Sbjct: 272 GNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEYRKYIEKDAALE 331
Query: 194 RRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKA 253
RRFQP++V EP+VDE+IQIL+GLR+RYE HH++ TD A+ +A +LS +YISDRFLPDKA
Sbjct: 332 RRFQPIQVDEPTVDESIQILQGLRDRYEAHHRVSITDAAIQAAVKLSDRYISDRFLPDKA 391
Query: 254 IDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKA 313
IDLIDEAGS+VRLR P +ELE+ L + KEK+ AV+ Q+FEKA LRD E L+
Sbjct: 392 IDLIDEAGSKVRLRSYTTPPNLKELEQRLETVRKEKDAAVQSQEFEKAASLRDTEQKLRE 451
Query: 314 QISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEET 373
++ + + KE + G VT DI H+VS WTG+PV K++ E+D+LL +E
Sbjct: 452 ELDSTKNTWKE------KQGQENTEVTVDDIAHVVSVWTGVPVSKIAQTETDKLLNLESI 505
Query: 374 LHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGS 433
LH RVIGQ+EAVKA+S+A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+ALA FG
Sbjct: 506 LHSRVIGQEEAVKAVSKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAEAMFGD 565
Query: 434 EEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPD 493
E+AMIR+DMSE+ME+H+ S+L+GSPPGYVGY EGGQLTE VRR+PY+V+L DEIEKAHPD
Sbjct: 566 EDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPYSVILLDEIEKAHPD 625
Query: 494 VFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSY 553
VFN++LQ+LEDGRLTDSKGRTVDF+NT+LIMTSNVG+S +++ + +GF++ +D Y
Sbjct: 626 VFNILLQVLEDGRLTDSKGRTVDFRNTVLIMTSNVGASTLQR-NKNVGFNVSDSGED--Y 682
Query: 554 NRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQ 613
+K V EELK+ FRPEFLNR+DE IVF L K ++EI +M ++ RL +DI L
Sbjct: 683 KDMKGKVMEELKRAFRPEFLNRIDETIVFHSLEKAHLQEIVTLMSDQLTKRLIEQDIHLS 742
Query: 614 VTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVD 668
+T++ ++++ +EG++P YGARPLRRAI + +ED ++E++L I G ++ +DV+
Sbjct: 743 LTDKAKDKIADEGFDPEYGARPLRRAIQKHIEDRLSEELLKGTIITGQNISIDVE 797
>gi|345021357|ref|ZP_08784970.1| ATP-dependent Clp protease [Ornithinibacillus scapharcae TW25]
Length = 808
Score = 834 bits (2155), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/674 (60%), Positives = 532/674 (78%), Gaps = 10/674 (1%)
Query: 5 STEAVGAGVGGGSSGN-KMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTK 63
S E+ A G G + N PTL+ +LT A+EG +DPV+GR +IERV+Q+L RRTK
Sbjct: 144 SNESQAARQGRGQASNANTPTLDSLARDLTASAKEGNIDPVIGRSKEIERVIQVLSRRTK 203
Query: 64 NNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERL 123
NNP LIGEPGVGKTA+AEGLAQ+I + +VP+T+ K+V+TLDMG +VAGTKYRGEFE+RL
Sbjct: 204 NNPVLIGEPGVGKTAVAEGLAQQIINNEVPETLRDKRVMTLDMGTVVAGTKYRGEFEDRL 263
Query: 124 KKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYR 183
KK+MEEI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTL+EYR
Sbjct: 264 KKVMEEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLEEYR 323
Query: 184 KHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQY 243
K+IEKD ALERRFQP++V EP+++ETIQILKGLR+RYE HH++ TDEA+ +AA+LS +Y
Sbjct: 324 KYIEKDAALERRFQPIQVDEPTLEETIQILKGLRDRYEAHHRVTITDEAIDAAAKLSDRY 383
Query: 244 ISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGE 303
I+DRFLPDKAIDLIDEAGS+VRLR +P ++LE++L ++ KEK+ AV+ Q+FEKA
Sbjct: 384 ITDRFLPDKAIDLIDEAGSKVRLRSYTVPPNLKDLEQKLEEVRKEKDAAVQSQEFEKAAS 443
Query: 304 LRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDE 363
LRD E L+ ++ ++ KE + G VT DI IVS WTG+PV K++ DE
Sbjct: 444 LRDSEQRLREELETTKNQWKE------KQGQEDSQVTVEDIASIVSIWTGVPVSKLTKDE 497
Query: 364 SDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELA 423
++RLL +EE LH RVIGQ+EAVKAIS+AIRRAR GLK+P RPI SFIF GPTGVGK+ELA
Sbjct: 498 TNRLLNLEEVLHDRVIGQEEAVKAISKAIRRARAGLKDPKRPIGSFIFLGPTGVGKTELA 557
Query: 424 KALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVL 483
+ALA F E+AMIR+DMSE+ME+H+ S+L+GSPPGYVGY EGGQLTE VRR+PY+VVL
Sbjct: 558 RALAEAMFADEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPYSVVL 617
Query: 484 FDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFD 543
DEIEKAHP+VFN++LQ+LEDGRLTDSKGR VDF+NT+LIMTSNVG+S +++ + +GF+
Sbjct: 618 LDEIEKAHPEVFNILLQVLEDGRLTDSKGRVVDFRNTVLIMTSNVGASELKR-NKYVGFN 676
Query: 544 LDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFD 603
L+ + KD Y +KS V +ELK+ FRPEFLNR+DE IVF L K +K I +M+K+V
Sbjct: 677 LEEEGKD--YKDMKSKVIDELKKAFRPEFLNRIDETIVFHSLEKKHMKSIVTLMIKDVQK 734
Query: 604 RLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSV 663
RL +DI+ +T++ E++ EG++P YGARPLRR+I + +ED M+E++L +I G V
Sbjct: 735 RLAEQDIDFSLTDKAVEKIANEGFDPEYGARPLRRSIQKNIEDLMSEELLKGKISFGQKV 794
Query: 664 IVDVDSDGNVTVLN 677
+ +++ G +L+
Sbjct: 795 KIGLNNKGEFIILS 808
>gi|403071334|ref|ZP_10912666.1| ATP-dependent Clp protease [Oceanobacillus sp. Ndiop]
Length = 809
Score = 834 bits (2155), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/671 (61%), Positives = 523/671 (77%), Gaps = 9/671 (1%)
Query: 6 TEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNN 65
++A G G S PTL+ +LT A+EGK+DPV+GR +IERV+Q+L RRTKNN
Sbjct: 147 SQAGRQGRTGQQSNASTPTLDSLARDLTVSAKEGKIDPVIGRAKEIERVIQVLSRRTKNN 206
Query: 66 PCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKK 125
P LIGEPGVGKTA+AEGLAQ+I +VP+T+ K+V+TLDMG +VAGTKYRGEFE+RLKK
Sbjct: 207 PVLIGEPGVGKTAVAEGLAQQIIDNEVPETLRDKRVMTLDMGTVVAGTKYRGEFEDRLKK 266
Query: 126 LMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKH 185
+MEEI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTLDEYRK+
Sbjct: 267 VMEEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEYRKY 326
Query: 186 IEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYIS 245
IEKD ALERRFQP++V EP+++ETIQIL GLR+RYE HH++ TDEA+ +AA LS +YI+
Sbjct: 327 IEKDAALERRFQPIQVDEPTLEETIQILNGLRDRYEAHHRVTITDEAIEAAATLSDRYIT 386
Query: 246 DRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELR 305
DRFLPDKAIDLIDEAGS+VRL +P +ELE++L ++ KEK+ AV+ Q+FEKA LR
Sbjct: 387 DRFLPDKAIDLIDEAGSKVRLHSYTVPPNLKELEQKLEEVRKEKDAAVQSQEFEKAASLR 446
Query: 306 DREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESD 365
D E + ++ D+ KE + G VT DI +VS WTG+PV K++ DES+
Sbjct: 447 DSEQRFREELEKTKDEWKE------KQGQTDSEVTVEDIASVVSIWTGVPVSKLTKDESE 500
Query: 366 RLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKA 425
RLL ME LH RVIGQ EAV A+S+AIRRAR GLK+P RPI SFIF GPTGVGK+ELA+A
Sbjct: 501 RLLNMESVLHNRVIGQSEAVDAVSKAIRRARAGLKDPKRPIGSFIFLGPTGVGKTELARA 560
Query: 426 LAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFD 485
LA F EEAMIR+DMSE+MERH S+L+GSPPGYVGY EGGQLTE VRR+PY+VVL D
Sbjct: 561 LAEVMFADEEAMIRIDMSEYMERHATSRLVGSPPGYVGYEEGGQLTEKVRRKPYSVVLLD 620
Query: 486 EIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLD 545
EIEKAHP+VFN++LQ+LEDGRLTDSKGR VDF+NT++IMTSNVG+S +++ + +GF+L
Sbjct: 621 EIEKAHPEVFNILLQVLEDGRLTDSKGRLVDFRNTVIIMTSNVGASELKR-NKYVGFNLG 679
Query: 546 YDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRL 605
+ KD Y +KS V EELK+ FRPEFLNR+DE IVF L K +K+I +ML+++ RL
Sbjct: 680 EENKD--YKEMKSKVMEELKKAFRPEFLNRIDETIVFHSLEKEHMKDIVTLMLEQLQRRL 737
Query: 606 KTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIV 665
K +DI L +T++ E++ EG++P YGARPLRR+I + +ED ++E++L I +G +V +
Sbjct: 738 KGQDIHLSLTDKAVEKIANEGFDPEYGARPLRRSIQKNIEDLLSEELLKESISKGQNVKI 797
Query: 666 DVDSDGNVTVL 676
+++ G VL
Sbjct: 798 GLNNKGEFIVL 808
>gi|443315779|ref|ZP_21045253.1| ATPase with chaperone activity, ATP-binding subunit [Leptolyngbya
sp. PCC 6406]
gi|442784616|gb|ELR94482.1| ATPase with chaperone activity, ATP-binding subunit [Leptolyngbya
sp. PCC 6406]
Length = 824
Score = 834 bits (2155), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/652 (62%), Positives = 525/652 (80%), Gaps = 8/652 (1%)
Query: 25 LEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLA 84
L E+ T++T LA GKLDPV+GR +IERVVQILGRRTKNNP L+GEPGVGKTAIAEGLA
Sbjct: 168 LAEFSTDITALAAAGKLDPVIGRALEIERVVQILGRRTKNNPVLVGEPGVGKTAIAEGLA 227
Query: 85 QRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVH 144
QRI + DVP + GK++++LDMGLL++GT++RG+FEER+ ++++E+++ IIL IDE+H
Sbjct: 228 QRIVNQDVPPELFGKRILSLDMGLLLSGTRFRGDFEERITQVIKEVREDRSIILAIDELH 287
Query: 145 TLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEP 204
TL+GAG+ EG DAAN+LKP+LARGELQCIGATTLDE+RK+IE+D ALERRFQ V++ P
Sbjct: 288 TLVGAGSLEGGTDAANLLKPALARGELQCIGATTLDEFRKYIERDAALERRFQSVRINPP 347
Query: 205 SVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRV 264
SV ETI+IL+GLR RYE H++ D+AL +AAQLS +YISDR LPDKAIDLIDEAGSRV
Sbjct: 348 SVTETIEILQGLRSRYEQFHQIVLEDDALTAAAQLSDRYISDRHLPDKAIDLIDEAGSRV 407
Query: 265 RLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKE 324
+LRH QL +REL++ RQ+ ++ AV QDF AG L+++ L +I+A
Sbjct: 408 KLRH-QLNYPSRELKQAFRQVNQDLEGAVLRQDFPAAGTLQEQRQQLLEEITA------G 460
Query: 325 MSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEA 384
A+++ P+V E DI IV++WTG+PV +++ E+ +LL +E+TLH+RVIGQ+EA
Sbjct: 461 QGDADSKHARRLPLVGEDDIAEIVASWTGVPVTRMTESEAAQLLHLEDTLHERVIGQNEA 520
Query: 385 VKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSE 444
V A+SRAIRR+RV L +P+RPIAS IFSGPTGVGK+EL KALA FGSEEAMIRLDMSE
Sbjct: 521 VMAVSRAIRRSRVNLSSPDRPIASLIFSGPTGVGKTELTKALAMALFGSEEAMIRLDMSE 580
Query: 445 FMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILED 504
FME HTV+KL+GSPPG+VGY EGGQLTEAVRR+PY VVL DEIEKAHPDVFN++LQ+LED
Sbjct: 581 FMEPHTVAKLLGSPPGFVGYEEGGQLTEAVRRKPYAVVLMDEIEKAHPDVFNILLQLLED 640
Query: 505 GRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDL-DYDEKDSSYNRIKSLVTEE 563
GRLTD+KGRTV FKNTL+IMTSN+GS VIEKGG +GFD + D S Y I++LV EE
Sbjct: 641 GRLTDAKGRTVSFKNTLIIMTSNIGSRVIEKGGGGLGFDTSENDAATSQYQNIRNLVQEE 700
Query: 564 LKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVV 623
+KQ+FRPE LNRLDE+IVFRQLT+ EV E+AD++L +V RL + I++ +TE F+ER++
Sbjct: 701 MKQFFRPELLNRLDEIIVFRQLTRSEVMEVADLLLVQVNQRLAERQIQVSLTEAFKERLI 760
Query: 624 EEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTV 675
+EGY+ YGARP+RRAI RL+ED +AE +L +I+ GD+V +DVD++G V V
Sbjct: 761 QEGYDIRYGARPMRRAISRLVEDGLAEAILRSDIQPGDTVTLDVDANGEVQV 812
>gi|149183498|ref|ZP_01861926.1| ClpC [Bacillus sp. SG-1]
gi|148848792|gb|EDL63014.1| ClpC [Bacillus sp. SG-1]
Length = 813
Score = 833 bits (2153), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/662 (61%), Positives = 523/662 (79%), Gaps = 10/662 (1%)
Query: 14 GGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPG 73
GG ++ PTL+ +LT +A E LDPV+GR +I+RV+++L RRTKNNP LIGEPG
Sbjct: 152 GGSNTNANTPTLDSLARDLTAIAREDSLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPG 211
Query: 74 VGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQS 133
VGKTAIAEGLAQ+I + +VP+ + K+V+TLDMG +VAGTKYRGEFE+RLKK+M+EI+Q+
Sbjct: 212 VGKTAIAEGLAQQIVNNEVPEILRDKRVMTLDMGTVVAGTKYRGEFEDRLKKVMDEIRQA 271
Query: 134 DEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALE 193
IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTLDEYRK+IEKD ALE
Sbjct: 272 GNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEYRKYIEKDAALE 331
Query: 194 RRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKA 253
RRFQP++V EP+ +E++QILKGLR+RYE HH++ TDEA+ +A +LS +YISDRFLPDKA
Sbjct: 332 RRFQPIQVDEPTAEESVQILKGLRDRYEAHHRVSITDEAIEAAVKLSDRYISDRFLPDKA 391
Query: 254 IDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKA 313
IDLIDE+GS+VRLR P +ELE +L +I KEK+ AV+ Q+FEKA LRD E L+
Sbjct: 392 IDLIDESGSKVRLRSYTTPPNLKELEVKLEEIRKEKDAAVQSQEFEKAASLRDTEQRLRE 451
Query: 314 QISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEET 373
++ KE + G VT DI +VS+WTGIPV K++ E+D+LLK+EE
Sbjct: 452 ELEDTKKTWKE------KQGQENTEVTVEDIAKVVSSWTGIPVSKLAQTETDKLLKLEEI 505
Query: 374 LHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGS 433
LH RVIGQDEAVKA+S+A+RRAR GLK+P RPI SF+F GPTGVGK+ELA+ALA FG
Sbjct: 506 LHSRVIGQDEAVKAVSKAVRRARAGLKDPKRPIGSFVFLGPTGVGKTELARALAESMFGD 565
Query: 434 EEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPD 493
EE+MIR+DMSE+ME+H+ S+L+GSPPGYVGY EGGQLTE VRR+PY+VVL DEIEKAHPD
Sbjct: 566 EESMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPYSVVLLDEIEKAHPD 625
Query: 494 VFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSY 553
VFN++LQ+LEDGRLTDSKGRTVDF+NT+LIMTSNVG+ ++K + +GF++ E+D Y
Sbjct: 626 VFNILLQVLEDGRLTDSKGRTVDFRNTVLIMTSNVGAESLKKN-KHVGFNIQDGEQD--Y 682
Query: 554 NRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQ 613
+K V EELK+ FRPEFLNR+DE+IVF L K +KEI +M ++ RLK +DI L+
Sbjct: 683 KDMKGKVMEELKRAFRPEFLNRIDEIIVFHSLEKAHLKEIVTLMSDQLTTRLKEQDISLE 742
Query: 614 VTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNV 673
+T+ +E++ +EG++P YGARPLRRAI + +ED ++E++L + G +++DV+ D +
Sbjct: 743 LTDAAKEKIADEGFDPEYGARPLRRAIQKHIEDRLSEELLRGTVLTGQHIVIDVE-DNDF 801
Query: 674 TV 675
TV
Sbjct: 802 TV 803
>gi|326203327|ref|ZP_08193192.1| ATPase AAA-2 domain protein [Clostridium papyrosolvens DSM 2782]
gi|325986585|gb|EGD47416.1| ATPase AAA-2 domain protein [Clostridium papyrosolvens DSM 2782]
Length = 810
Score = 832 bits (2150), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/655 (60%), Positives = 529/655 (80%), Gaps = 9/655 (1%)
Query: 23 PTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEG 82
PTL ++G +LT +A +GK+DPV+GR +IERV+QIL RRTKNNPCLIGEPGVGKTAIAEG
Sbjct: 163 PTLNQFGRDLTDMARDGKIDPVIGRDKEIERVIQILSRRTKNNPCLIGEPGVGKTAIAEG 222
Query: 83 LAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDE 142
LAQ+I G++P+ + K+V+TLD+ +VAG KYRGEFE+RLKK MEEI+++ +ILFIDE
Sbjct: 223 LAQKIVEGNIPEILSDKRVVTLDLSSMVAGAKYRGEFEDRLKKAMEEIRKAVNVILFIDE 282
Query: 143 VHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVP 202
+HT++GAGAAEGAIDA+NILKPSLARGE+Q IGATTL+EYRKHIEKD ALERRFQP+ V
Sbjct: 283 LHTIVGAGAAEGAIDASNILKPSLARGEIQVIGATTLNEYRKHIEKDAALERRFQPITVG 342
Query: 203 EPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGS 262
EPS +E ++ILKG+R++YE HH+++ TD+A+ +A +L +YI+DRFLPDKAIDLIDEA S
Sbjct: 343 EPSKEEAVEILKGVRDKYEAHHRVKITDDAIEAAVKLGDRYITDRFLPDKAIDLIDEAAS 402
Query: 263 RVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKG 322
R+RL+ P + +E+E+++ +++KEK +A+R Q+FEKA +RD E LK ++ + D+
Sbjct: 403 RIRLKTFTAPPDLKEMEEKVEKLSKEKEDAIRCQEFEKAARIRDDEQKLKNELDKVRDQW 462
Query: 323 KEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQD 382
++ ++ +T+ VTE DI IV++WTGIPV++++ +ES+RLLKMEETLHKRVIGQD
Sbjct: 463 RQKNQTKTDT------VTEDDIADIVASWTGIPVKRLAEEESERLLKMEETLHKRVIGQD 516
Query: 383 EAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDM 442
EAVK+IS+AIRR RVGLK+P RP+ SFIF GPTGVGK+EL KALA FG E++MIR+DM
Sbjct: 517 EAVKSISKAIRRGRVGLKDPKRPVGSFIFMGPTGVGKTELCKALAEAMFGDEKSMIRVDM 576
Query: 443 SEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQIL 502
SEFME+H+VSKL+GSPPGYVGY EGGQLTE VRRRPY+V+LFDEIEKAHPD+FN++LQIL
Sbjct: 577 SEFMEKHSVSKLVGSPPGYVGYDEGGQLTERVRRRPYSVLLFDEIEKAHPDIFNILLQIL 636
Query: 503 EDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTE 562
EDGRLTDS+GR VDF+NT++IMTSNVG+ I + +R+GF DE +Y +K+ V
Sbjct: 637 EDGRLTDSQGRVVDFRNTIIIMTSNVGARTITE-PKRLGFSTSNDESAKNYEDMKNNVMG 695
Query: 563 ELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERV 622
ELK+ FRPEFLNR+D++IVF L+K +KEI +ML + +RLK +I ++V+E +
Sbjct: 696 ELKKMFRPEFLNRIDDIIVFHPLSKENIKEIVRLMLDVLVNRLKANEIAMEVSEEAMGHL 755
Query: 623 VEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTVLN 677
++G++P +GARPLRRAI ++ED +AE ML ++K GDS+ +D DG V+N
Sbjct: 756 AQKGFDPVFGARPLRRAIQSMVEDKLAEDMLEGKVKAGDSIRIDF--DGENIVIN 808
>gi|421858335|ref|ZP_16290606.1| ATPase [Paenibacillus popilliae ATCC 14706]
gi|410832093|dbj|GAC41043.1| ATPase [Paenibacillus popilliae ATCC 14706]
Length = 812
Score = 832 bits (2149), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/676 (60%), Positives = 532/676 (78%), Gaps = 12/676 (1%)
Query: 5 STEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKN 64
STEAV + G S PTL+ +LT A+EG LDPV+GR +IERV+Q+L RRTKN
Sbjct: 144 STEAVSSH-NGQSQNVSTPTLDGLARDLTATAKEGNLDPVIGRTKEIERVIQVLSRRTKN 202
Query: 65 NPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLK 124
NP LIGEPGVGKTA+AEGLAQ+I + ++P+T+ K+V+TLDMG +VAGTKYRGEFE+RLK
Sbjct: 203 NPVLIGEPGVGKTAVAEGLAQKIINNEIPETLRDKRVMTLDMGSVVAGTKYRGEFEDRLK 262
Query: 125 KLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRK 184
K+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKP+LARGELQCIGATTLDEYRK
Sbjct: 263 KIMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPALARGELQCIGATTLDEYRK 322
Query: 185 HIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYI 244
+IEKD ALERRFQP+ V +P+++ETIQILKGLR+RYE HH+++ +DEA+ A +LS +YI
Sbjct: 323 YIEKDAALERRFQPITVDQPTIEETIQILKGLRDRYEAHHRVKISDEAIDQAVKLSDRYI 382
Query: 245 SDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGEL 304
+DRFLPDKAIDLIDEAGS+VRL +P +ELE L I KEK+ +V+ Q+FEKA L
Sbjct: 383 TDRFLPDKAIDLIDEAGSKVRLNSYTVPPNLKELEARLEDIRKEKDASVQSQEFEKAAAL 442
Query: 305 RDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDES 364
RD E ++ ++ ++ ++ KE + G + VT DI IVS+WTG+PV K+ +E+
Sbjct: 443 RDTEQKMREELDSVRNQWKE------KQGRMDSEVTPEDIAQIVSSWTGVPVVKLKEEET 496
Query: 365 DRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAK 424
RLL MEE LH+RVIGQDEAVKA+SRAIRRAR GLK+P RP+ SFIF GPTGVGK+ELA+
Sbjct: 497 QRLLNMEEVLHERVIGQDEAVKAVSRAIRRARAGLKDPKRPMGSFIFLGPTGVGKTELAR 556
Query: 425 ALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLF 484
ALA FG E A+IR+DMSE+ME+H+ ++L+G+PPGYVGY EGGQLTE VRR+PY+VVL
Sbjct: 557 ALAESLFGDENAVIRIDMSEYMEKHSTARLVGAPPGYVGYEEGGQLTEKVRRKPYSVVLL 616
Query: 485 DEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGF-D 543
DE+EKAHP+VFN++LQ+LEDGRLTDSKGR VDF+NTL+I+TSNVG+ I++ +GF
Sbjct: 617 DEVEKAHPEVFNILLQVLEDGRLTDSKGRVVDFRNTLIILTSNVGAEAIKRN-TTLGFTS 675
Query: 544 LDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFD 603
D +E+D YN +K V ELK+ FRPEFLNR+DE IVF L + + EI +M +E+
Sbjct: 676 SDNNERD--YNNMKDKVMAELKKSFRPEFLNRIDETIVFHSLEEKHIAEIVTLMAEELRK 733
Query: 604 RLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSV 663
RLK +D++ Q+T+ + + +EGY+P+YGARPLRRAI + +ED ++E++L EI++GDSV
Sbjct: 734 RLKEQDVDFQLTDAAKAFLAKEGYDPAYGARPLRRAIQKHIEDRLSEELLKGEIEKGDSV 793
Query: 664 IVDVDSDGNVTVLNGS 679
+D + DGN+ VL S
Sbjct: 794 TID-EQDGNLVVLRNS 808
>gi|23097548|ref|NP_691014.1| ATP-dependent Clp protease [Oceanobacillus iheyensis HTE831]
gi|54035854|sp|Q8EU05.1|CLPB_OCEIH RecName: Full=Chaperone protein ClpB
gi|22775771|dbj|BAC12049.1| ATP-dependent Clp protease (ATP-binding subunit) [Oceanobacillus
iheyensis HTE831]
Length = 809
Score = 831 bits (2147), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/671 (60%), Positives = 525/671 (78%), Gaps = 9/671 (1%)
Query: 6 TEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNN 65
++A G G S PTL+ +LT A+EGK+DPV+GR +IERV+Q+L RRTKNN
Sbjct: 147 SQAGRQGRSGQQSNASTPTLDSLARDLTVSAKEGKIDPVIGRSKEIERVIQVLSRRTKNN 206
Query: 66 PCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKK 125
P LIGEPGVGKTA+AEGLAQ+I +VP+T+ K+V+TLDMG +VAGTKYRGEFE+RLKK
Sbjct: 207 PVLIGEPGVGKTAVAEGLAQQIIDNEVPETLRDKRVMTLDMGTVVAGTKYRGEFEDRLKK 266
Query: 126 LMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKH 185
+MEEI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTLDEYRK+
Sbjct: 267 VMEEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEYRKY 326
Query: 186 IEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYIS 245
IEKD ALERRFQP++V EP+++ETIQIL GLR+RYE HH++ TDEA+ +AA LS +YI+
Sbjct: 327 IEKDAALERRFQPIQVDEPTLEETIQILNGLRDRYEAHHRVTITDEAIEAAASLSDRYIT 386
Query: 246 DRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELR 305
DRFLPDKAIDLIDEAGS+VRLR +P +ELE++L ++ KEK+ AV+ Q+FEKA LR
Sbjct: 387 DRFLPDKAIDLIDEAGSKVRLRSYTVPPNLKELEQKLDEVRKEKDAAVQSQEFEKAASLR 446
Query: 306 DREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESD 365
D E + ++ ++ KE + G VT DI +VS WTG+PV K++ DE+D
Sbjct: 447 DSEQRFREELETTKNQWKE------KQGQTDSEVTMEDIAAVVSTWTGVPVSKLTKDETD 500
Query: 366 RLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKA 425
RLL ME+ LH RVIGQ EAV A+++AIRRAR GLK+P RPI SFIF GPTGVGK+ELA+A
Sbjct: 501 RLLNMEKILHDRVIGQSEAVNAVAKAIRRARAGLKDPKRPIGSFIFLGPTGVGKTELARA 560
Query: 426 LAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFD 485
LA F E+AMIR+DMSE+MERH S+L+GSPPGYVGY EGGQLTE VRR+PY+VVL D
Sbjct: 561 LAEVMFADEDAMIRIDMSEYMERHATSRLVGSPPGYVGYDEGGQLTEKVRRKPYSVVLLD 620
Query: 486 EIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLD 545
E+EKAHP+VFN++LQ+LEDGRLTDSKGR VDF+NT++IMTSNVG+S +++ + +GF LD
Sbjct: 621 EVEKAHPEVFNILLQVLEDGRLTDSKGRVVDFRNTVIIMTSNVGASELKR-NKYVGFALD 679
Query: 546 YDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRL 605
+EKD Y +KS V EELK+ FRPEFLNR+DE IVF L K +K+I +M++++ RL
Sbjct: 680 NEEKD--YKDMKSKVIEELKKAFRPEFLNRIDETIVFHSLEKEHMKDIVTLMVQQLQKRL 737
Query: 606 KTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIV 665
K +D+ L +T++ E++ EG++P YGARPLRR+I + +ED ++E++L I++ V +
Sbjct: 738 KEQDLHLSLTDKAIEKIANEGFDPEYGARPLRRSIQKNIEDLLSEELLRGAIEKEQQVKI 797
Query: 666 DVDSDGNVTVL 676
+++ G VL
Sbjct: 798 GLNNKGEFIVL 808
>gi|376259729|ref|YP_005146449.1| chaperone ATPase [Clostridium sp. BNL1100]
gi|373943723|gb|AEY64644.1| ATPase with chaperone activity, ATP-binding subunit [Clostridium
sp. BNL1100]
Length = 810
Score = 831 bits (2146), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/653 (60%), Positives = 528/653 (80%), Gaps = 8/653 (1%)
Query: 23 PTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEG 82
PTL ++G +LT +A +GK+DPV+GR +IERV+QIL RRTKNNPCLIGEPGVGKTAIAEG
Sbjct: 163 PTLNQFGRDLTDMARDGKVDPVIGRDKEIERVIQILSRRTKNNPCLIGEPGVGKTAIAEG 222
Query: 83 LAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDE 142
LAQ+I G++P+ + K+V+TLD+ +VAG KYRGEFE+RLKK MEEI+++ +ILFIDE
Sbjct: 223 LAQKIVEGNIPEILSDKRVVTLDLSSMVAGAKYRGEFEDRLKKAMEEIRKTTNVILFIDE 282
Query: 143 VHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVP 202
+HT++GAGAAEGAIDA+NILKPSLARGE+Q IGATTL+EYRKHIEKD ALERRFQP+ V
Sbjct: 283 LHTIVGAGAAEGAIDASNILKPSLARGEIQVIGATTLNEYRKHIEKDAALERRFQPITVG 342
Query: 203 EPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGS 262
EPS +E ++ILKG+R++YE HH+++ TD+AL +A +L +YI+DRFLPDKAIDLIDEA S
Sbjct: 343 EPSKEEAVEILKGVRDKYEAHHRVKITDDALEAAVKLGDRYITDRFLPDKAIDLIDEAAS 402
Query: 263 RVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKG 322
R+RL+ P + +E+E+ + +++KEK +A+R Q+FEKA +RD E LK ++ + D+
Sbjct: 403 RIRLKTFTAPPDLKEMEERVEKLSKEKEDAIRCQEFEKAARIRDDEQKLKNELDKIRDQW 462
Query: 323 KEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQD 382
+ ++ +T+ VTE +I IV++WTGIPV++++ +ES+RLLKMEETLHKRVIGQD
Sbjct: 463 HQKNQTKTDT------VTEDEIADIVASWTGIPVKRLAEEESERLLKMEETLHKRVIGQD 516
Query: 383 EAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDM 442
EAVK+IS+AIRR RVGLK+P RP+ SFIF GPTGVGK+EL KALA FG E++MIR+DM
Sbjct: 517 EAVKSISKAIRRGRVGLKDPKRPVGSFIFMGPTGVGKTELCKALAEAMFGDEKSMIRVDM 576
Query: 443 SEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQIL 502
SEFME+H+VSKL+GSPPGYVGY EGGQLTE VRR+PY+V+LFDEIEKAHPD+FN++LQIL
Sbjct: 577 SEFMEKHSVSKLVGSPPGYVGYDEGGQLTERVRRKPYSVLLFDEIEKAHPDIFNILLQIL 636
Query: 503 EDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTE 562
EDGRLTDS+GR VDF+NT++IMTSNVG+ I + +R+GF DE +Y +K+ V
Sbjct: 637 EDGRLTDSQGRVVDFRNTIIIMTSNVGARTITE-PKRLGFSASNDESAKNYEDMKNNVMG 695
Query: 563 ELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERV 622
ELK+ FRPEFLNR+D++IVF L+K +KEI +ML + +RLK +I ++V+E + +
Sbjct: 696 ELKKMFRPEFLNRIDDIIVFHPLSKENIKEIVRLMLDVLVNRLKANEITMEVSEEAMDYL 755
Query: 623 VEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTV 675
++G++P +GARPLRRAI ++ED +AE ML ++K GDS+ +D D + N+ V
Sbjct: 756 AQKGFDPVFGARPLRRAIQSMVEDKLAEDMLEGKVKAGDSIRIDFDGE-NIVV 807
>gi|423718349|ref|ZP_17692531.1| ATP-dependent Clp protease ATP-binding subunit clpA [Geobacillus
thermoglucosidans TNO-09.020]
gi|383365159|gb|EID42460.1| ATP-dependent Clp protease ATP-binding subunit clpA [Geobacillus
thermoglucosidans TNO-09.020]
Length = 810
Score = 831 bits (2146), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/672 (61%), Positives = 530/672 (78%), Gaps = 10/672 (1%)
Query: 5 STEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKN 64
S E+V GGG+S PTL+ +LT +A EG+LDPVVGR +I+RV+++L RRTKN
Sbjct: 143 SNESVSGHSGGGASHVSTPTLDSLARDLTAIAREGRLDPVVGRSKEIQRVIEVLSRRTKN 202
Query: 65 NPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLK 124
NP LIGEPGVGKTAIAEGLAQ+I + +VP+T+ K+V+TLDMG +VAGTKYRGEFE+RLK
Sbjct: 203 NPVLIGEPGVGKTAIAEGLAQQIINNEVPETLRDKRVMTLDMGTVVAGTKYRGEFEDRLK 262
Query: 125 KLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRK 184
K+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKP+LARGELQCIGATTLDEYRK
Sbjct: 263 KVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPALARGELQCIGATTLDEYRK 322
Query: 185 HIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYI 244
+IEKD ALERRFQP+ V EP+V+E+IQILKGLR+RYE HH++ +D+A+V A +LS +YI
Sbjct: 323 YIEKDAALERRFQPIYVDEPTVEESIQILKGLRDRYEAHHRVSISDDAIVQAVKLSDRYI 382
Query: 245 SDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGEL 304
+DRFLPDKAIDLIDEA S+VRLR P + +ELE++L ++ KEK+ AV+ Q+FEKA L
Sbjct: 383 TDRFLPDKAIDLIDEACSKVRLRSFTAPPKLKELEQKLEEVRKEKDAAVQSQEFEKAASL 442
Query: 305 RDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDES 364
RD E L+ ++ KE E VT DI +VS+WTGIPV K++ E+
Sbjct: 443 RDMEQRLREELEETKRAWKEKQGQENSE------VTVEDIAMVVSSWTGIPVAKLAQTET 496
Query: 365 DRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAK 424
+RLLK+EE LH RV+GQDEAVKA+++A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+
Sbjct: 497 ERLLKLEEILHSRVVGQDEAVKAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELAR 556
Query: 425 ALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLF 484
ALA FG E+A+IR+DMSE+ME+H+ S+LIGSPPGYVGY EGGQLTE VRR+PY+VVL
Sbjct: 557 ALAEAMFGDEDALIRIDMSEYMEKHSTSRLIGSPPGYVGYEEGGQLTEKVRRKPYSVVLL 616
Query: 485 DEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDL 544
DE+EKAHPDVFN++LQ+LEDGRLTDSKGRTVDF+NT++IMTSNVG+ +++ + +GF++
Sbjct: 617 DEMEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTIIIMTSNVGADALKR-NKYVGFNV 675
Query: 545 DYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDR 604
++D Y +K V +ELK+ FRPEFLNR+DE+IVF L K +K+I +M + R
Sbjct: 676 --QDEDQKYKDMKGKVMDELKRAFRPEFLNRIDEIIVFHSLEKQHLKQIVKLMADTLIKR 733
Query: 605 LKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVI 664
LK +DI+L++T+ E++V EGY+P YGARPLRRA+ + +ED ++E++L I +G VI
Sbjct: 734 LKEQDIDLELTDAAIEKIVSEGYDPEYGARPLRRALQKQVEDRLSEELLKGTIAKGQKVI 793
Query: 665 VDVDSDGNVTVL 676
VDV DG VL
Sbjct: 794 VDV-KDGEFVVL 804
>gi|312109233|ref|YP_003987549.1| ATPase AAA [Geobacillus sp. Y4.1MC1]
gi|336233627|ref|YP_004586243.1| ATPase AAA-2 domain-containing protein [Geobacillus
thermoglucosidasius C56-YS93]
gi|311214334|gb|ADP72938.1| ATPase AAA-2 domain protein [Geobacillus sp. Y4.1MC1]
gi|335360482|gb|AEH46162.1| ATPase AAA-2 domain protein [Geobacillus thermoglucosidasius
C56-YS93]
Length = 812
Score = 831 bits (2146), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/672 (61%), Positives = 530/672 (78%), Gaps = 10/672 (1%)
Query: 5 STEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKN 64
S E+V GGG+S PTL+ +LT +A EG+LDPVVGR +I+RV+++L RRTKN
Sbjct: 145 SNESVSGHSGGGASHVSTPTLDSLARDLTAIAREGRLDPVVGRSKEIQRVIEVLSRRTKN 204
Query: 65 NPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLK 124
NP LIGEPGVGKTAIAEGLAQ+I + +VP+T+ K+V+TLDMG +VAGTKYRGEFE+RLK
Sbjct: 205 NPVLIGEPGVGKTAIAEGLAQQIINNEVPETLRDKRVMTLDMGTVVAGTKYRGEFEDRLK 264
Query: 125 KLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRK 184
K+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKP+LARGELQCIGATTLDEYRK
Sbjct: 265 KVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPALARGELQCIGATTLDEYRK 324
Query: 185 HIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYI 244
+IEKD ALERRFQP+ V EP+V+E+IQILKGLR+RYE HH++ +D+A+V A +LS +YI
Sbjct: 325 YIEKDAALERRFQPIYVDEPTVEESIQILKGLRDRYEAHHRVSISDDAIVQAVKLSDRYI 384
Query: 245 SDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGEL 304
+DRFLPDKAIDLIDEA S+VRLR P + +ELE++L ++ KEK+ AV+ Q+FEKA L
Sbjct: 385 TDRFLPDKAIDLIDEACSKVRLRSFTAPPKLKELEQKLEEVRKEKDAAVQSQEFEKAASL 444
Query: 305 RDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDES 364
RD E L+ ++ KE E VT DI +VS+WTGIPV K++ E+
Sbjct: 445 RDMEQRLREELEETKRAWKEKQGQENSE------VTVEDIAMVVSSWTGIPVAKLAQTET 498
Query: 365 DRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAK 424
+RLLK+EE LH RV+GQDEAVKA+++A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+
Sbjct: 499 ERLLKLEEILHSRVVGQDEAVKAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELAR 558
Query: 425 ALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLF 484
ALA FG E+A+IR+DMSE+ME+H+ S+LIGSPPGYVGY EGGQLTE VRR+PY+VVL
Sbjct: 559 ALAEAMFGDEDALIRIDMSEYMEKHSTSRLIGSPPGYVGYEEGGQLTEKVRRKPYSVVLL 618
Query: 485 DEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDL 544
DE+EKAHPDVFN++LQ+LEDGRLTDSKGRTVDF+NT++IMTSNVG+ +++ + +GF++
Sbjct: 619 DEMEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTIIIMTSNVGADALKR-NKYVGFNV 677
Query: 545 DYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDR 604
++D Y +K V +ELK+ FRPEFLNR+DE+IVF L K +K+I +M + R
Sbjct: 678 --QDEDQKYKDMKGKVMDELKRAFRPEFLNRIDEIIVFHSLEKQHLKQIVKLMADTLIKR 735
Query: 605 LKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVI 664
LK +DI+L++T+ E++V EGY+P YGARPLRRA+ + +ED ++E++L I +G VI
Sbjct: 736 LKEQDIDLELTDAAIEKIVSEGYDPEYGARPLRRALQKQVEDRLSEELLKGTIAKGQKVI 795
Query: 665 VDVDSDGNVTVL 676
VDV DG VL
Sbjct: 796 VDV-KDGEFVVL 806
>gi|294496954|ref|YP_003560654.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Bacillus
megaterium QM B1551]
gi|294346891|gb|ADE67220.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Bacillus
megaterium QM B1551]
Length = 812
Score = 830 bits (2144), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/683 (59%), Positives = 531/683 (77%), Gaps = 13/683 (1%)
Query: 5 STEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKN 64
S EA + GGGSS PTL+ +LT +A EG LDPV+GR +I+RV+++L RRTKN
Sbjct: 143 SNEAASSHQGGGSSNANTPTLDSLARDLTVVAREGSLDPVIGRGKEIQRVIEVLSRRTKN 202
Query: 65 NPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLK 124
NP LIGEPGVGKTAIAEGLAQ+I + +VP+ + K+V+TLDMG +VAGTKYRGEFE+RLK
Sbjct: 203 NPVLIGEPGVGKTAIAEGLAQQIVNNEVPEILRDKRVMTLDMGTVVAGTKYRGEFEDRLK 262
Query: 125 KLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRK 184
K+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTLDEYRK
Sbjct: 263 KVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEYRK 322
Query: 185 HIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYI 244
+IEKD ALERRFQP++V EP+++E+IQILKGLR+RYE HH++ +DEA+ A +LS +YI
Sbjct: 323 YIEKDAALERRFQPIQVDEPTLEESIQILKGLRDRYEAHHRVSISDEAIEQAVKLSDRYI 382
Query: 245 SDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGEL 304
SDRFLPDKAIDLIDEAGS+VRLR P +ELE++L + EK+ +V+ Q+FEKA L
Sbjct: 383 SDRFLPDKAIDLIDEAGSKVRLRSFTTPPNLKELEQKLESVRNEKDASVQSQEFEKAASL 442
Query: 305 RDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDES 364
RD E L+ ++ KE E A VT DI +VS+WTG+PV K++ +E+
Sbjct: 443 RDTEQRLREELEDTKKIWKEQQGKENSA------VTVEDIAMVVSSWTGVPVSKLAQEET 496
Query: 365 DRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAK 424
+RLL MEE LH RVIGQ+EAVKA+++A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+
Sbjct: 497 ERLLNMEEILHSRVIGQEEAVKAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELAR 556
Query: 425 ALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLF 484
ALA FG E+AMIR+DMSE+ME+H+ S+L+GSPPGYVGY EGGQLTE VRR+PY+VVL
Sbjct: 557 ALAESIFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPYSVVLL 616
Query: 485 DEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDL 544
DEIEKAHPDVFN++LQ+LEDGRLTDSKGRTVDF+NT+LIMTSNVG+ +++ + +GF +
Sbjct: 617 DEIEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTILIMTSNVGADTLKR-SKHLGFTV 675
Query: 545 DYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDR 604
+ + +D Y +K V E+K+ FRPEFLNR+DE+IVF L K + EI +M ++ R
Sbjct: 676 EAEGQD--YKDMKGKVMAEMKRAFRPEFLNRIDEIIVFHSLEKPHLAEIVKLMADQLTKR 733
Query: 605 LKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVI 664
LK ++I+L++T+ +++ EEG++P YGARPLRRAI + +ED ++E++L +++G V
Sbjct: 734 LKEQEIDLELTKEAIDKIAEEGFDPEYGARPLRRAIQKHIEDRLSEELLKGVVQKGQKVT 793
Query: 665 VDVDSDGNVTVLNGSSGAPESLA 687
+DVD G V S AP S++
Sbjct: 794 LDVDK-GEFVV---KSSAPSSIS 812
>gi|403238378|ref|ZP_10916964.1| Class III stress response-related ATPase, ClpC [Bacillus sp.
10403023]
Length = 814
Score = 830 bits (2144), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/644 (62%), Positives = 517/644 (80%), Gaps = 9/644 (1%)
Query: 23 PTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEG 82
PTL+ +LT +A EG LDPV+GR +I+RV+++L RRTKNNP LIGEPGVGKTAIAEG
Sbjct: 162 PTLDSLARDLTAIAREGSLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEG 221
Query: 83 LAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDE 142
LAQ+I + +VP+T+ K+V+TLDMG +VAGTKYRGEFE+RLKK+M+EI+Q+ IILFIDE
Sbjct: 222 LAQQIVNNEVPETLRDKRVMTLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDE 281
Query: 143 VHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVP 202
+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTLDEYRK+IEKD ALERRFQP++V
Sbjct: 282 LHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEYRKYIEKDAALERRFQPIQVD 341
Query: 203 EPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGS 262
EP+V+E+I ILKGLR+RYE HH++ +DE+++ A +LS +YISDRFLPDKAIDLIDEAGS
Sbjct: 342 EPTVEESILILKGLRDRYEAHHRVSISDESIIQAVKLSDRYISDRFLPDKAIDLIDEAGS 401
Query: 263 RVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKG 322
+VRLR P +ELE++L ++ KEK+ AV+ Q+FEKA LRD E L+ Q+
Sbjct: 402 KVRLRSYTAPPNLKELEQKLEEVRKEKDAAVQSQEFEKAASLRDSEQRLREQLEETKKNW 461
Query: 323 KEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQD 382
KE + G VT DI +VS+WTG+PV K++ E+D+LL MEE LH RVIGQ+
Sbjct: 462 KE------KQGQENSEVTVDDIAMVVSSWTGVPVSKLAQTEADKLLNMEEILHSRVIGQE 515
Query: 383 EAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDM 442
EAVKA+S+A+RR+R GLK+P RP SFIF GPTGVGK+ELA+ALA FG E+AMIR+DM
Sbjct: 516 EAVKAVSKAVRRSRAGLKDPKRPTGSFIFLGPTGVGKTELARALAESIFGDEDAMIRVDM 575
Query: 443 SEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQIL 502
SE+ME+H+ S+L+GSPPGYVGY EGGQLTE VRR+PY+V+L DEIEKAHPDVFN++LQ+L
Sbjct: 576 SEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPYSVILLDEIEKAHPDVFNILLQVL 635
Query: 503 EDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTE 562
EDGRLTDSKGRTVDF+NT+LIMTSNVG+S + K + +GF ++ +++D Y +K V E
Sbjct: 636 EDGRLTDSKGRTVDFRNTILIMTSNVGASTL-KRNKYVGFAMEDEKQD--YRNMKDKVME 692
Query: 563 ELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERV 622
ELK+ FRPEFLNR+DE+IVF L K +KEI +M ++ RLK +D EL++TE ++++
Sbjct: 693 ELKKAFRPEFLNRIDEIIVFHSLEKKHLKEIVTLMADQLTKRLKEQDFELELTEAAKDQI 752
Query: 623 VEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVD 666
EEGY+P YGARPLRRAI + +ED ++E++L I++G +++D
Sbjct: 753 AEEGYDPDYGARPLRRAIQKQIEDRLSEELLRGNIEKGKKIVMD 796
>gi|384049297|ref|YP_005497314.1| Class III stress response ATPase, ClpC [Bacillus megaterium
WSH-002]
gi|345446988|gb|AEN92005.1| Class III stress response ATPase, ClpC [Bacillus megaterium
WSH-002]
Length = 813
Score = 829 bits (2142), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/683 (59%), Positives = 531/683 (77%), Gaps = 13/683 (1%)
Query: 5 STEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKN 64
S EA + GGGSS PTL+ +LT +A EG LDPV+GR +I+RV+++L RRTKN
Sbjct: 144 SNEAASSHQGGGSSNANTPTLDSLARDLTVVAREGSLDPVIGRGKEIQRVIEVLSRRTKN 203
Query: 65 NPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLK 124
NP LIGEPGVGKTAIAEGLAQ+I + +VP+ + K+V+TLDMG +VAGTKYRGEFE+RLK
Sbjct: 204 NPVLIGEPGVGKTAIAEGLAQQIVNNEVPEILRDKRVMTLDMGTVVAGTKYRGEFEDRLK 263
Query: 125 KLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRK 184
K+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTLDEYRK
Sbjct: 264 KVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEYRK 323
Query: 185 HIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYI 244
+IEKD ALERRFQP++V EP+++E+IQILKGLR+RYE HH++ +DEA+ A +LS +YI
Sbjct: 324 YIEKDAALERRFQPIQVDEPTLEESIQILKGLRDRYEAHHRVSISDEAIEQAVKLSDRYI 383
Query: 245 SDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGEL 304
SDRFLPDKAIDLIDEAGS+VRLR P +ELE++L + EK+ +V+ Q+FEKA L
Sbjct: 384 SDRFLPDKAIDLIDEAGSKVRLRSFTTPPNLKELEQKLESVRNEKDASVQSQEFEKAASL 443
Query: 305 RDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDES 364
RD E L+ ++ KE E A VT DI +VS+WTG+PV K++ +E+
Sbjct: 444 RDTEQRLREELEDTKKIWKEQQGKENSA------VTVEDIAMVVSSWTGVPVSKLAQEET 497
Query: 365 DRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAK 424
+RLL MEE LH RVIGQ+EAVKA+++A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+
Sbjct: 498 ERLLNMEEILHSRVIGQEEAVKAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELAR 557
Query: 425 ALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLF 484
ALA FG E+AMIR+DMSE+ME+H+ S+L+GSPPGYVGY EGGQLTE VRR+PY+VVL
Sbjct: 558 ALAESIFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPYSVVLL 617
Query: 485 DEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDL 544
DEIEKAHPDVFN++LQ+LEDGRLTDSKGRTVDF+NT+LIMTSNVG+ +++ + +GF +
Sbjct: 618 DEIEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTILIMTSNVGADTLKR-SKHLGFTV 676
Query: 545 DYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDR 604
+ + +D Y +K V E+K+ FRPEFLNR+DE+IVF L K + EI +M ++ R
Sbjct: 677 EAEGQD--YKDMKGKVMAEMKRAFRPEFLNRIDEIIVFHSLEKPHLAEIVKLMADQLTKR 734
Query: 605 LKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVI 664
LK ++I+L++T+ +++ EEG++P YGARPLRRAI + +ED ++E++L +++G V
Sbjct: 735 LKEQEIDLELTKEAIDKIAEEGFDPEYGARPLRRAIQKHIEDRLSEELLKGVVQKGQKVT 794
Query: 665 VDVDSDGNVTVLNGSSGAPESLA 687
+DVD G V S AP S++
Sbjct: 795 LDVDK-GEFVV---KSSAPSSIS 813
>gi|433461663|ref|ZP_20419269.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Halobacillus
sp. BAB-2008]
gi|432189835|gb|ELK46900.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Halobacillus
sp. BAB-2008]
Length = 819
Score = 829 bits (2142), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/666 (60%), Positives = 520/666 (78%), Gaps = 9/666 (1%)
Query: 10 GAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLI 69
G GG ++ PTL+ +LT +A+EG +DPV+GR +IERV+Q+L RRTKNNP L+
Sbjct: 155 GGASGGQATNANTPTLDSLARDLTAIAKEGNIDPVIGRSKEIERVIQVLSRRTKNNPVLV 214
Query: 70 GEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEE 129
GEPGVGKTAIAEGLAQ+I + +VP+ + K+V+TLDMG +VAGTKYRGEFE+RLKK+MEE
Sbjct: 215 GEPGVGKTAIAEGLAQQIMNNEVPEILRDKRVMTLDMGTVVAGTKYRGEFEDRLKKVMEE 274
Query: 130 IKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKD 189
I+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTLDEYRK+IEKD
Sbjct: 275 IRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEYRKYIEKD 334
Query: 190 PALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFL 249
ALERRFQP+KV EP++DE+IQILKGLR+RYE HH++ TD+++ SA + S +YI+DRFL
Sbjct: 335 AALERRFQPIKVDEPTLDESIQILKGLRDRYEAHHRVTITDDSIESAVRFSDRYITDRFL 394
Query: 250 PDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREM 309
PDKAIDLIDEA S+VRLR P +ELE++L ++ KEK+ AV+ Q+FEKA LRD E
Sbjct: 395 PDKAIDLIDEAASKVRLRSYTAPPNLKELEQKLEEVRKEKDAAVQSQEFEKAASLRDSEQ 454
Query: 310 DLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLK 369
L+ ++ D+ KE + G VT DI +VS WTG+PV K++ DES+RLL
Sbjct: 455 RLRDELEETKDEWKE------KQGQEDSEVTVEDIASVVSTWTGVPVSKMTKDESERLLN 508
Query: 370 MEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAY 429
+EETLH RVIGQ+EAVKAIS+AIRRAR GLK+P RPI SFIF GPTGVGK+ELA+ALA
Sbjct: 509 LEETLHNRVIGQEEAVKAISKAIRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAES 568
Query: 430 YFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEK 489
FG E+AMIR+DMSE+ME+H+ S+L+GSPPGYVGY EGGQLTE VR +PY+VVL DEIEK
Sbjct: 569 MFGEEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRNKPYSVVLLDEIEK 628
Query: 490 AHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEK 549
AHP+VFN++LQ+LEDGRLTDSKGR VDF+NT+LIMTSNVG+S + K + +GF + E
Sbjct: 629 AHPEVFNILLQVLEDGRLTDSKGRLVDFRNTVLIMTSNVGASEL-KQNKYVGFSM--GEA 685
Query: 550 DSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKD 609
D Y +KS VT+ LK+ FRPEFLNR+DE IVF L K +K+I +M +E+ RL+ ++
Sbjct: 686 DQDYKDMKSKVTDALKKAFRPEFLNRIDETIVFHSLEKKHMKDIVVLMAEELRKRLQEQE 745
Query: 610 IELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDS 669
I+ +++ + + + G++P YGARPLRRAI + +ED ++E++L I +G V +D+D
Sbjct: 746 IDFTLSDAAIQHIADSGFDPEYGARPLRRAIQKNVEDLLSEELLKENIAKGQKVKIDLDE 805
Query: 670 DGNVTV 675
+ N V
Sbjct: 806 NKNYVV 811
>gi|357039780|ref|ZP_09101572.1| ATPase AAA-2 domain protein [Desulfotomaculum gibsoniae DSM 7213]
gi|355357586|gb|EHG05359.1| ATPase AAA-2 domain protein [Desulfotomaculum gibsoniae DSM 7213]
Length = 815
Score = 828 bits (2138), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/665 (60%), Positives = 530/665 (79%), Gaps = 8/665 (1%)
Query: 12 GVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGE 71
G GG+ G K TL++YG +LT +A E LDPVVGR+ +IERVVQIL RRTKNNP LIG+
Sbjct: 157 GCAGGACGTKTATLDQYGRDLTSMAREDNLDPVVGREKEIERVVQILSRRTKNNPVLIGD 216
Query: 72 PGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIK 131
PGVGKTA+ EGLAQRI +G+VP+ + K+++TLD+ LVAGTKYRGEFEERLKK++EEI
Sbjct: 217 PGVGKTAVVEGLAQRIVAGNVPEILLQKRLVTLDLASLVAGTKYRGEFEERLKKVVEEIT 276
Query: 132 QSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPA 191
+ ++I+FIDE+HT+IGAGAAEGAIDAANILKP+LARGELQCIGATTLDEYRKHIE+D A
Sbjct: 277 REKDVIVFIDELHTIIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIERDSA 336
Query: 192 LERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPD 251
LERRFQP+ V EPSV+ET+QIL GLR++YE HH++R TD+AL +AA+LS +YI+DRFLPD
Sbjct: 337 LERRFQPITVEEPSVEETVQILTGLRDKYEAHHRVRITDDALKAAARLSDRYITDRFLPD 396
Query: 252 KAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDL 311
KAIDL+DEAGSRVRL+ P + ++LE+ + +I KEK AV Q+FEKA +LRD E L
Sbjct: 397 KAIDLMDEAGSRVRLQAFTAPPDVKDLEQRIEEICKEKEAAVNNQEFEKAAQLRDEESKL 456
Query: 312 KAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKME 371
+ ++ GK + + + G V E DI IV++WTGIPV+K++ +ESDRLL+ME
Sbjct: 457 RQELD-----GKRSTWQQQKGGKKLEVTAE-DIAQIVASWTGIPVKKLAEEESDRLLRME 510
Query: 372 ETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYF 431
E LH+RV+GQDEAV A+SRAIRRAR GLK+P RPI SFIF GPTGVGK+ELA+ALA F
Sbjct: 511 EILHQRVVGQDEAVAAVSRAIRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAEAMF 570
Query: 432 GSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAH 491
G E+AM+R+DMSE+ME+ VS+L+G+PPGYVGY EGGQLT+AVRR+PY+VVL DEIEKAH
Sbjct: 571 GDEDAMVRIDMSEYMEKFAVSRLVGAPPGYVGYDEGGQLTDAVRRKPYSVVLLDEIEKAH 630
Query: 492 PDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDS 551
PDVFN++LQ+LEDGRLTD+KGRTVDF+NT++IMTSNVG +I++ +GF + + ++
Sbjct: 631 PDVFNILLQVLEDGRLTDAKGRTVDFRNTVIIMTSNVGVGLIKR-ETTMGFKTN-EGANT 688
Query: 552 SYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIE 611
SY +K V ++L++ FRPEFLNR+D++IVF L+++ +KEI +M++EV RL +I
Sbjct: 689 SYENMKKRVMDDLRRAFRPEFLNRIDDIIVFHGLSQVHIKEIVGLMVQEVAGRLAENEIA 748
Query: 612 LQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDG 671
++VT+ E + EG++ YGARPLRRAI + +ED ++E+ML + GD V++D ++ G
Sbjct: 749 IEVTDAAGEYLAREGFDEEYGARPLRRAIQKEIEDRLSEEMLRGTFRRGDRVLIDKETGG 808
Query: 672 NVTVL 676
+ V+
Sbjct: 809 GLKVV 813
>gi|340356808|ref|ZP_08679449.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Sporosarcina
newyorkensis 2681]
gi|339620146|gb|EGQ24717.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Sporosarcina
newyorkensis 2681]
Length = 817
Score = 828 bits (2138), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/671 (60%), Positives = 527/671 (78%), Gaps = 13/671 (1%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
++G +VG+ S+ PTL+ +LT++A EG LDPV+GR +I RV+++L R
Sbjct: 144 LLGNDESSVGSTSNNASAAT--PTLDSLARDLTEIAREGTLDPVIGRSKEITRVIEVLAR 201
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNP LIGEPGVGKTAIAEGLAQ++ + +VP+ + K+V+TLDMG +VAGTKYRGEFE
Sbjct: 202 RTKNNPVLIGEPGVGKTAIAEGLAQQVVNNEVPEILRDKRVMTLDMGTVVAGTKYRGEFE 261
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
+R+KK+MEEI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTLD
Sbjct: 262 DRMKKVMEEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLD 321
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRK+IEKD ALERRFQP++V EP+V+ETIQI++GLR+RYE HH+++ TDEA+ +AA++S
Sbjct: 322 EYRKYIEKDAALERRFQPIQVDEPTVEETIQIIRGLRDRYEAHHRVKITDEAVEAAAKMS 381
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
+YISDRFLPDKAIDL+DEAGS+VRLR P +ELE +L I EKN AV+ Q+FEK
Sbjct: 382 DRYISDRFLPDKAIDLMDEAGSKVRLRSYTTPPNLKELEVKLEAIRSEKNAAVQSQEFEK 441
Query: 301 AGELRDREMDLKAQISALVDKGKE-MSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 359
A RD E +K ++ KE K E+E VT DI +V+ WTG+PV+K+
Sbjct: 442 AASYRDTEQKMKEELETTKAAWKEKQGKTESE-------VTVDDIAAVVAMWTGVPVDKI 494
Query: 360 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 419
+ ES +LLKMEE LH+RVIGQ+EAV AISRAIRRAR GLK+P RPI SFIF GPTGVGK
Sbjct: 495 AETESAKLLKMEEILHERVIGQNEAVLAISRAIRRARAGLKDPKRPIGSFIFLGPTGVGK 554
Query: 420 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 479
+ELA+ALA FG E+AMIR+DMSE+ME+H S+L+GSPPGYVGY EGGQLTE VRR+PY
Sbjct: 555 TELARALAEVMFGDEDAMIRIDMSEYMEKHATSRLVGSPPGYVGYEEGGQLTEKVRRKPY 614
Query: 480 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 539
+VVL DEIEKAHPDVFN++LQ+LEDGRLTDSKGRTVDF+NT++IMTSNVG++ ++K R
Sbjct: 615 SVVLLDEIEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTVMIMTSNVGATELKK-NRY 673
Query: 540 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 599
+GF++ E D Y +K + ELK+ FRPEFLNR+D+MIVF L K +++I +M +
Sbjct: 674 VGFNIQDGESD--YEDMKEKMLSELKKTFRPEFLNRVDDMIVFHSLEKEHLRQIVSLMSE 731
Query: 600 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 659
++ RL +DIEL +TE ++++ +EGY+P YGARPLRRA+ + +ED ++E++L ++
Sbjct: 732 DLAKRLAEQDIELVLTEAAQDKITDEGYDPEYGARPLRRALQKHVEDRLSEELLEGKVLM 791
Query: 660 GDSVIVDVDSD 670
G+ V++DV+ D
Sbjct: 792 GEKVVIDVNDD 802
>gi|295702321|ref|YP_003595396.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Bacillus
megaterium DSM 319]
gi|294799980|gb|ADF37046.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Bacillus
megaterium DSM 319]
Length = 813
Score = 827 bits (2137), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/683 (59%), Positives = 531/683 (77%), Gaps = 13/683 (1%)
Query: 5 STEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKN 64
S EA + GGGSS PTL+ +LT +A EG LDPV+GR +I+RV+++L RRTKN
Sbjct: 144 SNEAASSHQGGGSSNANTPTLDSLARDLTVVAREGSLDPVIGRGKEIQRVIEVLSRRTKN 203
Query: 65 NPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLK 124
NP LIGEPGVGKTAIAEGLAQ+I + +VP+ + K+V+TLDMG +VAGTKYRGEFE+RLK
Sbjct: 204 NPVLIGEPGVGKTAIAEGLAQQIVNNEVPEILRDKRVMTLDMGTVVAGTKYRGEFEDRLK 263
Query: 125 KLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRK 184
K+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTLDEYRK
Sbjct: 264 KVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEYRK 323
Query: 185 HIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYI 244
+IEKD ALERRFQP++V EP+++E+IQILKGLR+RYE HH++ +DEA+ A +LS +YI
Sbjct: 324 YIEKDAALERRFQPIQVDEPTLEESIQILKGLRDRYEAHHRVSISDEAIEQAVKLSDRYI 383
Query: 245 SDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGEL 304
SDRFLPDKAIDLIDEAGS+VRLR P +ELE++L + EK+ +V+ Q+FEKA L
Sbjct: 384 SDRFLPDKAIDLIDEAGSKVRLRSFTTPPNLKELEQKLESVRNEKDASVQSQEFEKAASL 443
Query: 305 RDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDES 364
RD E L+ ++ KE E A VT DI +VS+WTG+PV K++ +E+
Sbjct: 444 RDTEQRLREELEDTKKIWKEQQGKENSA------VTVEDIAMVVSSWTGVPVSKLAQEET 497
Query: 365 DRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAK 424
+RLL MEE LH RVIGQ+EAVKA+++A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+
Sbjct: 498 ERLLNMEEILHSRVIGQEEAVKAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELAR 557
Query: 425 ALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLF 484
ALA FG E+AMIR+DMSE+ME+H+ S+L+GSPPGYVGY EGGQLTE VRR+PY+VVL
Sbjct: 558 ALAESIFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPYSVVLL 617
Query: 485 DEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDL 544
DEIEKAHPDVFN++LQ+LEDGRLTDSKGRTVDF+NT+LIMTSNVG+ +++ + +GF +
Sbjct: 618 DEIEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTILIMTSNVGADTLKR-SKHLGFTV 676
Query: 545 DYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDR 604
+ + ++ Y +K V E+K+ FRPEFLNR+DE+IVF L K + EI +M ++ R
Sbjct: 677 EAEGQE--YKDMKGKVMAEMKRAFRPEFLNRIDEIIVFHSLEKPHLAEIVKLMADQLTKR 734
Query: 605 LKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVI 664
LK ++I+L++T+ +++ EEG++P YGARPLRRAI + +ED ++E++L +++G V
Sbjct: 735 LKEQEIDLELTKEAIDKIAEEGFDPEYGARPLRRAIQKHIEDRLSEELLKGVVQKGQKVT 794
Query: 665 VDVDSDGNVTVLNGSSGAPESLA 687
+DVD G V S AP S++
Sbjct: 795 LDVDK-GEFVV---KSSAPSSIS 813
>gi|311029019|ref|ZP_07707109.1| class III stress response-related ATPase, AAA+ superfamily protein
[Bacillus sp. m3-13]
Length = 812
Score = 827 bits (2136), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/653 (62%), Positives = 515/653 (78%), Gaps = 10/653 (1%)
Query: 23 PTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEG 82
PTL+ +LT +A EG LDPV+GR +I+RV+++L RRTKNNP LIGEPGVGKTAIAEG
Sbjct: 163 PTLDSLARDLTAVAREGSLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEG 222
Query: 83 LAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDE 142
LAQ+I S +VP+ + K+V+TLDMG +VAGTKYRGEFE+RLKK+M+EI+Q+ IILFIDE
Sbjct: 223 LAQQIVSNEVPEILRDKRVMTLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDE 282
Query: 143 VHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVP 202
+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTLDEYRK+IEKD ALERRFQP+ V
Sbjct: 283 LHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEYRKYIEKDAALERRFQPITVD 342
Query: 203 EPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGS 262
EP+ E+IQIL+GLR+RYE HH++ TDEA+ A +LS +YISDRFLPDKAIDLIDEAGS
Sbjct: 343 EPTTAESIQILRGLRDRYEAHHRVSITDEAIEQAVKLSDRYISDRFLPDKAIDLIDEAGS 402
Query: 263 RVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKG 322
+VRLR P +ELE +L + EK+ AV+ Q+FEKA LRD E L+ Q+
Sbjct: 403 KVRLRSFTTPPNLKELEVKLESVRNEKDAAVQSQEFEKAASLRDTEQRLREQLEETKKTW 462
Query: 323 KEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQD 382
KE + G VT DI +VS+WTGIPV K++ E+D+LL ME LH RVIGQD
Sbjct: 463 KE------KQGQENSEVTVEDIAMVVSSWTGIPVSKLAQTETDKLLNMESLLHSRVIGQD 516
Query: 383 EAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDM 442
EAVKA+S+A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+ALA FG E+AMIR+DM
Sbjct: 517 EAVKAVSKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESIFGDEDAMIRIDM 576
Query: 443 SEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQIL 502
SE+ME+H+ S+L+GSPPGYVGY EGGQLTE VRR+PY+V+L DEIEKAHPDVFN++LQ+L
Sbjct: 577 SEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPYSVILLDEIEKAHPDVFNILLQVL 636
Query: 503 EDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTE 562
EDGRLTDSKGRTVDF+NTL+IMTSNVG+ +++ + +GF++ +++ +Y +K V E
Sbjct: 637 EDGRLTDSKGRTVDFRNTLVIMTSNVGADALKR-NKYVGFNV--QDENQNYKDMKGKVME 693
Query: 563 ELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERV 622
ELK+ FRPEFLNR+DEMIVF L K +KEI ++ +++ RLK +DI+L++TE +E++
Sbjct: 694 ELKKAFRPEFLNRVDEMIVFHSLEKTHLKEIVTLLSEQLTKRLKEQDIDLELTEAAKEKI 753
Query: 623 VEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTV 675
EEGY+P YGARPLRRAI + +ED ++E++L I++G + +DV DG V
Sbjct: 754 SEEGYDPEYGARPLRRAIQKHVEDKLSEELLRGNIEKGKKISLDV-VDGEFVV 805
>gi|408355460|ref|YP_006843991.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Amphibacillus
xylanus NBRC 15112]
gi|407726231|dbj|BAM46229.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Amphibacillus
xylanus NBRC 15112]
Length = 811
Score = 827 bits (2136), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/675 (59%), Positives = 529/675 (78%), Gaps = 11/675 (1%)
Query: 5 STEAVGAGVGGGSSGN--KMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRT 62
S E+V G + N PTL+ +LT+ A EG +DPV+GR+ +IERV+Q+L RRT
Sbjct: 144 SNESVRKGQARHTQSNPASTPTLDSLARDLTQTAREGNVDPVIGREKEIERVIQVLSRRT 203
Query: 63 KNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEER 122
KNNP LIGEPGVGKTA+AEGLAQ+I + +VP+T+ K+V+TLDMG +VAGTKYRGEFE+R
Sbjct: 204 KNNPVLIGEPGVGKTAVAEGLAQQIVNNEVPETLRDKRVMTLDMGTVVAGTKYRGEFEDR 263
Query: 123 LKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEY 182
LKK+MEEI+Q+ +ILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATT+DEY
Sbjct: 264 LKKVMEEIRQAGNVILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTIDEY 323
Query: 183 RKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQ 242
RK+IEKD ALERRFQP++V EP+V+E+I+ILKGLR+RYE HH++ TDEA+ +AA LS +
Sbjct: 324 RKYIEKDAALERRFQPIRVDEPTVEESIEILKGLRDRYEAHHRVTITDEAIEAAAHLSSR 383
Query: 243 YISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAG 302
YI+DRFLPDKAIDLIDEAGSRVRLR P +ELE +L +I KEK+ AV+ Q+FEKA
Sbjct: 384 YITDRFLPDKAIDLIDEAGSRVRLRSYTAPSNLKELENKLTEIRKEKDAAVQSQEFEKAA 443
Query: 303 ELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTD 362
LRD+E LK ++ +K +E E VV E DI +VS WTG+PV+ ++ D
Sbjct: 444 ALRDQEQKLKKELELTKEKWQEKQGKED-----SRVVVE-DIASVVSNWTGVPVDSLTKD 497
Query: 363 ESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSEL 422
E+DRLL +E LH RVIGQ EAV A+S+AIRRAR GLK+P RPI SFIF GPTGVGK+EL
Sbjct: 498 EADRLLNLESILHGRVIGQSEAVTAVSKAIRRARAGLKDPKRPIGSFIFLGPTGVGKTEL 557
Query: 423 AKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVV 482
A+ALA FG E+AMIR+DMSE+ME+HT S+L+GSPPGYVGY EGGQLTE VR +PY+VV
Sbjct: 558 ARALAEAMFGDEDAMIRIDMSEYMEKHTTSRLVGSPPGYVGYEEGGQLTEKVRSKPYSVV 617
Query: 483 LFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGF 542
L DEIEKAHP+VFN++LQ+LEDGRLTDSKGR VDF+NT+LIMTSNVG+S ++K + +GF
Sbjct: 618 LLDEIEKAHPEVFNILLQVLEDGRLTDSKGRLVDFRNTVLIMTSNVGASELQK-NKFVGF 676
Query: 543 DLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVF 602
++D + D + ++K+ VT+ LK+ FRPEFLNR+DE IVF L + +K+I +M++++
Sbjct: 677 NIDDHQTD--HKQMKANVTDALKKAFRPEFLNRIDETIVFHALERGHMKDIVTLMVRQLQ 734
Query: 603 DRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDS 662
DRL + ++ ++ + E++ EEG++P YGARPLRR+I + +ED ++E +L EI + ++
Sbjct: 735 DRLVKQGLDFTISNKAIEKIAEEGFDPEYGARPLRRSIQKNIEDLLSEALLRGEINKNET 794
Query: 663 VIVDVDSDGNVTVLN 677
+ + + S+G +LN
Sbjct: 795 IRIGLSSNGKFIILN 809
>gi|384136760|ref|YP_005519474.1| ATPase [Alicyclobacillus acidocaldarius subsp. acidocaldarius
Tc-4-1]
gi|339290845|gb|AEJ44955.1| ATPase AAA-2 domain protein [Alicyclobacillus acidocaldarius subsp.
acidocaldarius Tc-4-1]
Length = 812
Score = 826 bits (2134), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/648 (62%), Positives = 522/648 (80%), Gaps = 11/648 (1%)
Query: 23 PTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEG 82
PTL+ +LT++A +GKLDPV+GR+ +IERV+Q+L RRTKNNP LIGEPGVGKTAIAEG
Sbjct: 160 PTLDSLARDLTQMARDGKLDPVIGREKEIERVIQVLSRRTKNNPVLIGEPGVGKTAIAEG 219
Query: 83 LAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDE 142
LAQRI +GDVP+T+ K+V+ LDMG +VAGTKYRGEFE+RLKK+M+EI+Q+ +ILFIDE
Sbjct: 220 LAQRIVTGDVPETLRNKRVMVLDMGTVVAGTKYRGEFEDRLKKIMDEIRQAGNVILFIDE 279
Query: 143 VHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVP 202
+HTLIGAG AEGAIDA+NILKP+LARGELQCIGATTLDEYRKHIEKDPALERRFQP+ V
Sbjct: 280 LHTLIGAGGAEGAIDASNILKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPIMVD 339
Query: 203 EPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGS 262
EPS +E ++ILKGLR+RYE HH+++ TDEAL +A +LS +YISDRFLPDKAIDLIDEA S
Sbjct: 340 EPSPEEALEILKGLRDRYEAHHRVKITDEALEAAVKLSDRYISDRFLPDKAIDLIDEAAS 399
Query: 263 RVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKG 322
RVRLR P +ELE++L ++ EK+ AV+ Q+FE A LRD E +K ++ L
Sbjct: 400 RVRLRTHTAPPNLKELEQKLEKVRSEKDAAVQSQEFELAASLRDEEQKIKEELERL---- 455
Query: 323 KEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQD 382
KE + + DV VTE DI HIVS+WTGIPV+++ DES+RLL +E+ LH+RVIGQD
Sbjct: 456 KETWQKTQQLDDVR--VTEEDIAHIVSSWTGIPVQQLQQDESERLLNLEKILHERVIGQD 513
Query: 383 EAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDM 442
EAV+A+++AIRRAR GLK+P RPI SFIF GPTGVGK+ELA+ALA FG E+A+IR+DM
Sbjct: 514 EAVEAVAKAIRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAEALFGDEDALIRIDM 573
Query: 443 SEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQIL 502
SE+MERH+ S+L+GSPPGYVGY EGGQLTE VRR+PY+VVL DEIEKAHP+VFN++LQ+L
Sbjct: 574 SEYMERHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPYSVVLLDEIEKAHPEVFNILLQVL 633
Query: 503 EDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTE 562
+DGRLTD KGRTVDF+NT++IMTSNVG+ + KGG +GF + D+ Y +K V +
Sbjct: 634 DDGRLTDGKGRTVDFRNTVIIMTSNVGAEELRKGG-ALGFKREEDK----YLGMKDKVMD 688
Query: 563 ELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERV 622
ELK+ FRPEFLNR+DE+IVF L + ++ I D M+ + RLK ++IE ++T+ ++ +
Sbjct: 689 ELKRTFRPEFLNRIDEIIVFHPLDETHIERIVDKMVDNLKRRLKEQEIEFELTDEAKKFL 748
Query: 623 VEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSD 670
+ G++P YGARPL+RAI+R +ED ++ ++A EIK+GD V++ VD D
Sbjct: 749 AKVGFDPQYGARPLQRAIVRNVEDLLSSALIAGEIKKGDRVLLGVDGD 796
>gi|323490586|ref|ZP_08095791.1| Class III stress response-related ATPase, ClpC [Planococcus
donghaensis MPA1U2]
gi|323395678|gb|EGA88519.1| Class III stress response-related ATPase, ClpC [Planococcus
donghaensis MPA1U2]
Length = 820
Score = 826 bits (2134), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/674 (60%), Positives = 522/674 (77%), Gaps = 12/674 (1%)
Query: 5 STEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKN 64
S E G +S N PTL+ +LT++A EG LDPV+GR +I RV+++L RRTKN
Sbjct: 145 SNEQTSTGTSPNASAN-TPTLDGLARDLTQVAREGGLDPVIGRSDEITRVIEVLSRRTKN 203
Query: 65 NPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLK 124
NP LIGEPGVGKTAIAEGLAQ+I + ++P+T+ K+V+ LDMG +VAGTKYRGEFE+RLK
Sbjct: 204 NPVLIGEPGVGKTAIAEGLAQQIVNNEIPETLRDKRVMVLDMGTVVAGTKYRGEFEDRLK 263
Query: 125 KLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRK 184
K+M+EI+Q+ +ILFIDE+HTLIGAG AEGAIDA+NILKPSL+RGELQCIGATTLDEYRK
Sbjct: 264 KVMDEIRQAGNVILFIDELHTLIGAGGAEGAIDASNILKPSLSRGELQCIGATTLDEYRK 323
Query: 185 HIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYI 244
+IEKD ALERRFQP++V EPSV+E+IQI++GLR+RYE HH+++ TDEA+ +AA++S +YI
Sbjct: 324 YIEKDAALERRFQPIQVDEPSVEESIQIIRGLRDRYEAHHRVKITDEAIEAAAKMSDRYI 383
Query: 245 SDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGEL 304
SDRFLPDKAIDLIDEAGS+VRLR P + +ELE L EKNEAV+ Q+FEKA L
Sbjct: 384 SDRFLPDKAIDLIDEAGSKVRLRSYTTPPDLKELESRLEAARSEKNEAVQSQEFEKAASL 443
Query: 305 RDREMDLKAQISALVDKGKE-MSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDE 363
RD E L+ Q+ + KE K E+E VT DI +VS WTGIPV K++ E
Sbjct: 444 RDAEQKLQNQLDKTKKEWKEKQGKEESE-------VTVEDIAKVVSMWTGIPVSKLAQTE 496
Query: 364 SDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELA 423
SD+LL +E LH RVIGQ+EAV +IS+AIRRAR GLK+P RPI SFIF GPTGVGK+ELA
Sbjct: 497 SDKLLNLESILHNRVIGQNEAVTSISKAIRRARAGLKDPKRPIGSFIFLGPTGVGKTELA 556
Query: 424 KALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVL 483
+ALA FG EEAMIR+DMSE+MERH+ S+L+GSPPGYVGY EGGQLTE VRR+PY+VVL
Sbjct: 557 RALAESMFGDEEAMIRIDMSEYMERHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPYSVVL 616
Query: 484 FDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFD 543
DEIEKAHPDVFN++LQ+LEDGRLTDSKGR VDF+NT++IMTSNVG+ + K + +GF+
Sbjct: 617 LDEIEKAHPDVFNILLQVLEDGRLTDSKGRRVDFRNTVIIMTSNVGAEEL-KYNKYVGFN 675
Query: 544 LDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFD 603
L+ + D Y +K + ELK+ FRPEFLNR+D+MIVF L K ++EI ++M K++ D
Sbjct: 676 LEDAKTD--YKDMKGKMLAELKKAFRPEFLNRVDDMIVFHSLEKENLREIVNLMTKQLVD 733
Query: 604 RLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSV 663
RLK +DI+L++T+ E+V EGY+P YGARPLRR++ + +ED ++E++L G +
Sbjct: 734 RLKEQDIDLELTDAALEKVANEGYDPEYGARPLRRSLQKHVEDRLSEELLKGTALSGQKM 793
Query: 664 IVDVDSDGNVTVLN 677
I DV+ D V N
Sbjct: 794 IFDVEGDEFVVRTN 807
>gi|389816088|ref|ZP_10207275.1| Class III stress response-related ATPase, ClpC [Planococcus
antarcticus DSM 14505]
gi|388465352|gb|EIM07670.1| Class III stress response-related ATPase, ClpC [Planococcus
antarcticus DSM 14505]
Length = 818
Score = 826 bits (2134), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/667 (61%), Positives = 521/667 (78%), Gaps = 12/667 (1%)
Query: 5 STEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKN 64
S E G +S N PTL+ +LT++A EG LDPV+GR +I RV+++L RRTKN
Sbjct: 144 SNEQASTGTSPNASAN-TPTLDGLARDLTQVAREGGLDPVIGRSDEITRVIEVLSRRTKN 202
Query: 65 NPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLK 124
NP LIGEPGVGKTAIAEGLAQ+I + ++P+T+ K+V+ LDMG +VAGTKYRGEFE+RLK
Sbjct: 203 NPVLIGEPGVGKTAIAEGLAQQIVNNEIPETLRDKRVMVLDMGTVVAGTKYRGEFEDRLK 262
Query: 125 KLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRK 184
K+M+EI+Q+ +ILFIDE+HTLIGAG AEGAIDA+NILKPSL+RGELQCIGATTLDEYRK
Sbjct: 263 KVMDEIRQAGNVILFIDELHTLIGAGGAEGAIDASNILKPSLSRGELQCIGATTLDEYRK 322
Query: 185 HIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYI 244
+IEKD ALERRFQP++V EPSV+E+IQI++GLR+RYE HH+++ TDEA+ +AA++S +YI
Sbjct: 323 YIEKDAALERRFQPIQVDEPSVEESIQIIRGLRDRYEAHHRVKITDEAIEAAAKMSDRYI 382
Query: 245 SDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGEL 304
SDRFLPDKAIDLIDEAGS+VRLR +P + +ELE L EKNEAV+ Q+FEKA L
Sbjct: 383 SDRFLPDKAIDLIDEAGSKVRLRSYTIPPDLKELESRLEAARSEKNEAVQSQEFEKAASL 442
Query: 305 RDREMDLKAQISALVDKGKE-MSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDE 363
RD E L+ Q+ + KE K E+E VT DI +VS WTGIPV K++ E
Sbjct: 443 RDAEQKLQNQLDKTKKEWKEKQGKEESE-------VTVEDIAKVVSMWTGIPVSKLAQTE 495
Query: 364 SDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELA 423
SD+LL +E LH RVIGQDEAV +IS+AIRRAR GLK+P RPI SFIF GPTGVGK+ELA
Sbjct: 496 SDKLLNLEAILHNRVIGQDEAVTSISKAIRRARAGLKDPKRPIGSFIFLGPTGVGKTELA 555
Query: 424 KALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVL 483
+ALA FG E+AMIR+DMSE+MERH+ S+L+GSPPGYVGY EGGQLTE VRR+PY+V+L
Sbjct: 556 RALAESMFGDEDAMIRIDMSEYMERHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPYSVIL 615
Query: 484 FDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFD 543
DEIEKAHPDVFN++LQ+LEDGRLTDSKGR VDF+NT++IMTSNVG+ + K + +GF+
Sbjct: 616 LDEIEKAHPDVFNILLQVLEDGRLTDSKGRRVDFRNTVIIMTSNVGAEEL-KYNKYVGFN 674
Query: 544 LDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFD 603
LD + D Y +K + ELK+ FRPEFLNR+D+MIVF L K ++EI ++M K++ D
Sbjct: 675 LDDAKTD--YKDMKGKMLAELKKAFRPEFLNRVDDMIVFHSLEKENLREIVNLMTKQLVD 732
Query: 604 RLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSV 663
RLK +DI+L++TE E+V +EGY+P YGARPLRR++ + +ED ++E++L +
Sbjct: 733 RLKEQDIDLELTEAALEKVAKEGYDPEYGARPLRRSLQKHVEDRLSEELLKGTALSDQKI 792
Query: 664 IVDVDSD 670
I DV+ +
Sbjct: 793 IFDVEDN 799
>gi|319654839|ref|ZP_08008914.1| class III stress response-like ATPase [Bacillus sp. 2_A_57_CT2]
gi|317393402|gb|EFV74165.1| class III stress response-like ATPase [Bacillus sp. 2_A_57_CT2]
Length = 816
Score = 826 bits (2134), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/666 (60%), Positives = 520/666 (78%), Gaps = 10/666 (1%)
Query: 10 GAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLI 69
G+ GG ++ PTL+ +LT +A EG LDPV+GR +I+RV+++L RRTKNNP LI
Sbjct: 148 GSHQGGSAANANTPTLDGLARDLTAIAREGSLDPVIGRSKEIQRVIEVLSRRTKNNPVLI 207
Query: 70 GEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEE 129
GEPGVGKTAIAEGLAQ+I + +VP+T+ K+V+TLDMG +VAGTKYRGEFE+RLKK+M+E
Sbjct: 208 GEPGVGKTAIAEGLAQQIINNEVPETLRDKRVMTLDMGTVVAGTKYRGEFEDRLKKVMDE 267
Query: 130 IKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKD 189
I+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTLDEYRK+IEKD
Sbjct: 268 IRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEYRKYIEKD 327
Query: 190 PALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFL 249
ALERRFQP+ V EP+ +E++QIL+GLR+RYE HH++ TD A+ +A +LS +YISDRFL
Sbjct: 328 AALERRFQPITVDEPTAEESVQILEGLRDRYEAHHRVTITDAAIQAAVKLSDRYISDRFL 387
Query: 250 PDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREM 309
PDKAIDLIDEAGS+VRLR P +ELE +L + KEK+ AV+ Q+FEKA LRD E
Sbjct: 388 PDKAIDLIDEAGSKVRLRSYTTPPNLKELEVKLEDVRKEKDAAVQSQEFEKAASLRDTEQ 447
Query: 310 DLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLK 369
L+ Q+ KE E VT DI ++V++WTGIPV K++ E+++LL
Sbjct: 448 RLREQLEETKKTWKEKQGKENSE------VTVEDIANVVASWTGIPVSKLAQTETEKLLN 501
Query: 370 MEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAY 429
+EE LH RVIGQ+EAVKAIS+A+RRAR GLK+P RPI SF+F GPTGVGK+ELA+ALA
Sbjct: 502 LEEILHSRVIGQEEAVKAISKAVRRARAGLKDPKRPIGSFVFLGPTGVGKTELARALAEA 561
Query: 430 YFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEK 489
FG E+AMIR+DMSE+ME+H+ S+L+GSPPGYVGY EGGQLTE VRR+PY+VVL DEIEK
Sbjct: 562 MFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPYSVVLLDEIEK 621
Query: 490 AHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEK 549
AHPDVFN++LQ+LEDGRLTDSKGRTVDF+NT+LIMTSNVG+ +++ + +GF++ E+
Sbjct: 622 AHPDVFNILLQVLEDGRLTDSKGRTVDFRNTVLIMTSNVGAEALKR-NKYVGFNIQDGEQ 680
Query: 550 DSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKD 609
D Y +K V EE+K+ FRPEFLNR+DE+IVF L K ++EI +M + RLK +D
Sbjct: 681 D--YKDMKGKVMEEMKKSFRPEFLNRIDEIIVFHALEKKHLQEIVSLMSDTLTKRLKEQD 738
Query: 610 IELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDS 669
I L++T+ +E++ EGY+P YGARPLRRAI + +ED ++E++L + G SV++DV
Sbjct: 739 ITLELTDAAKEKISVEGYDPEYGARPLRRAIQKHIEDRLSEELLKGTVLTGQSVVIDV-K 797
Query: 670 DGNVTV 675
DG V
Sbjct: 798 DGEFVV 803
>gi|433447284|ref|ZP_20410881.1| Class III stress response-related ATPase, ClpC subunit
[Anoxybacillus flavithermus TNO-09.006]
gi|431999948|gb|ELK20855.1| Class III stress response-related ATPase, ClpC subunit
[Anoxybacillus flavithermus TNO-09.006]
Length = 810
Score = 826 bits (2133), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/677 (60%), Positives = 529/677 (78%), Gaps = 12/677 (1%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
++G S A +G GG++ PTL+ +LT +A EG LDPV+GR +I+RV+++L R
Sbjct: 141 LLGSSESA--SGHHGGATHANTPTLDSLARDLTAIAREGGLDPVIGRSKEIQRVIEVLSR 198
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNP LIGEPGVGKTAIAEGLAQ+I + +VP+T+ K+V+TLDMG +VAGTKYRGEFE
Sbjct: 199 RTKNNPVLIGEPGVGKTAIAEGLAQQIVNNEVPETLRDKRVMTLDMGTVVAGTKYRGEFE 258
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
+RLKK+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTLD
Sbjct: 259 DRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLD 318
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRK+IEKD ALERRFQP+ V EP+V+E+IQILKGLR+RYE HH++ +DEA+ A +LS
Sbjct: 319 EYRKYIEKDAALERRFQPIHVGEPTVEESIQILKGLRDRYEAHHRVSISDEAIEQAVKLS 378
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
+YISDRFLPDKAIDLIDEA S+VRLR P +ELE++L +I KEK+ AV+ Q+FEK
Sbjct: 379 DRYISDRFLPDKAIDLIDEACSKVRLRSFTTPPNLKELEQKLEEIRKEKDAAVQSQEFEK 438
Query: 301 AGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVS 360
A LRD E L+ Q+ KE + G VT DI +VS+WTGIPV K++
Sbjct: 439 AASLRDAEQKLREQLEETKRAWKE------KQGQENSEVTVEDIAAVVSSWTGIPVSKLA 492
Query: 361 TDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 420
E++RLLK+EE LH RVIGQ+EAVKA+++A+RRAR GLK+P RPI SFIF GPTGVGK+
Sbjct: 493 QTETERLLKLEEILHSRVIGQEEAVKAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKT 552
Query: 421 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 480
ELA+ALA FG E+AMIR+DMSE+ME+H+ S+L+GSPPGYVGY EGGQLTE VRR+PY+
Sbjct: 553 ELARALAEAMFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPYS 612
Query: 481 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI 540
V+L DEIEKAHPDVFN++LQ+LEDGRLTDSKGRTVDF+NT++IMTSNVG+ +++ + +
Sbjct: 613 VILLDEIEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTIIIMTSNVGADALKR-NKYV 671
Query: 541 GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 600
GF++ ++ Y +K V +ELK+ FRPEFLNR+DE+IVF L K +KEI +M+++
Sbjct: 672 GFNV--QDESQQYKDMKGKVMDELKKAFRPEFLNRIDEIIVFHSLEKKHLKEIVSLMVEQ 729
Query: 601 VFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEG 660
+ RL+ + I+L++T+ E++ EEGY+ YGARPLRRAI + +ED ++E++L I G
Sbjct: 730 LKKRLQEQQIDLELTDAAIEKLAEEGYDLEYGARPLRRAIQKHVEDRLSEELLKGTIGSG 789
Query: 661 DSVIVDVDSDGNVTVLN 677
V++DV DG VL
Sbjct: 790 QKVVMDV-KDGQFVVLT 805
>gi|89100727|ref|ZP_01173582.1| class III stress response-related ATPase [Bacillus sp. NRRL
B-14911]
gi|89084544|gb|EAR63690.1| class III stress response-related ATPase [Bacillus sp. NRRL
B-14911]
Length = 817
Score = 826 bits (2133), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/666 (61%), Positives = 524/666 (78%), Gaps = 10/666 (1%)
Query: 10 GAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLI 69
G+ GG ++ PTL+ +LT +A EG LDPV+GR +I+RV+++L RRTKNNP LI
Sbjct: 148 GSHQGGSAASANTPTLDSLARDLTAIAREGSLDPVIGRSKEIQRVIEVLSRRTKNNPVLI 207
Query: 70 GEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEE 129
GEPGVGKTAIAEGLAQ+I + +VP+ + K+V+TLDMG +VAGTKYRGEFE+RLKK+M+E
Sbjct: 208 GEPGVGKTAIAEGLAQQIINNEVPEILRDKRVMTLDMGTVVAGTKYRGEFEDRLKKVMDE 267
Query: 130 IKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKD 189
I+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTLDEYRK+IEKD
Sbjct: 268 IRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEYRKYIEKD 327
Query: 190 PALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFL 249
ALERRFQP+ V EP+ DE++QILKGLR+RYE HH++ TDEA+ +A +LS +YISDRFL
Sbjct: 328 AALERRFQPITVDEPTADESVQILKGLRDRYEAHHRVSITDEAIEAAVKLSDRYISDRFL 387
Query: 250 PDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREM 309
PDKAIDLIDEAGS+VRLR P +ELE +L ++ KEK+ AV+ Q+FEKA LRD E
Sbjct: 388 PDKAIDLIDEAGSKVRLRSYTTPPNLKELELKLEEVRKEKDAAVQSQEFEKAASLRDSEQ 447
Query: 310 DLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLK 369
L+ Q+ KE E VT DI H+V++WTGIPV K++ E+ +LL
Sbjct: 448 RLREQLEETKKSWKEKQGKENSE------VTVDDIAHVVASWTGIPVAKLAQTETAKLLN 501
Query: 370 MEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAY 429
MEE LH RVIGQ+EAVKAIS+A+RRAR GLK+P RPI SF+F GPTGVGK+ELA+ALA
Sbjct: 502 MEEILHSRVIGQEEAVKAISKAVRRARAGLKDPKRPIGSFVFLGPTGVGKTELARALAEA 561
Query: 430 YFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEK 489
FG E+AMIR+DMSE+ME+H+ S+L+GSPPGYVGY EGGQLTE VRR+PY+VVL DEIEK
Sbjct: 562 MFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPYSVVLLDEIEK 621
Query: 490 AHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEK 549
AHPDVFN++LQ+LEDGRLTDSKGRTVDF+NT+LIMTSNVG+ +++ + +GF++ E+
Sbjct: 622 AHPDVFNILLQVLEDGRLTDSKGRTVDFRNTVLIMTSNVGAEALKR-NKYVGFNIQDGEQ 680
Query: 550 DSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKD 609
D Y +K V EELK+ FRPEFLNR+DE+IVF L K +KEI ++ ++ RL+ ++
Sbjct: 681 D--YKDMKGKVMEELKKAFRPEFLNRIDEIIVFHALEKKHLKEIVTLLSDQLVKRLQEQE 738
Query: 610 IELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDS 669
I L +T++ +E++ EEGY+P YGARPLRRAI + +ED ++E++L ++ G +VI+DV+
Sbjct: 739 IVLGLTDKAKEKISEEGYDPEYGARPLRRAIQKHIEDRLSEELLKGQVLTGQNVIIDVE- 797
Query: 670 DGNVTV 675
DG V
Sbjct: 798 DGEFVV 803
>gi|333373136|ref|ZP_08465052.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Desmospora sp.
8437]
gi|332970715|gb|EGK09695.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Desmospora sp.
8437]
Length = 814
Score = 825 bits (2132), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/671 (60%), Positives = 535/671 (79%), Gaps = 10/671 (1%)
Query: 5 STEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKN 64
STEAV + GS N PTL+ +LT A+E KLDPV+GR +IERV+Q+L RRTKN
Sbjct: 144 STEAVSSHQASGSGAN-TPTLDSLAQDLTAAAKEDKLDPVIGRSKEIERVIQVLSRRTKN 202
Query: 65 NPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLK 124
NP LIGEPGVGKTA+AEGLAQ+I G+ P+T+ GK+V+TLDMG +VAGTKYRGEFE+RLK
Sbjct: 203 NPVLIGEPGVGKTAVAEGLAQKIHDGETPETLRGKRVMTLDMGTVVAGTKYRGEFEDRLK 262
Query: 125 KLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRK 184
K+M+EI+Q+ +ILFIDE+HTLIGAG AEGAIDA+NILKP+LARGELQCIGATTLDEYRK
Sbjct: 263 KIMDEIRQAGNVILFIDELHTLIGAGGAEGAIDASNILKPALARGELQCIGATTLDEYRK 322
Query: 185 HIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYI 244
+IEKD ALERRFQP+ V EPS +ETI ILKGLR+RYE HH+++ TDEA+ ++ +LS +YI
Sbjct: 323 YIEKDAALERRFQPITVDEPSSEETILILKGLRDRYEAHHRVKITDEAIEASVKLSDRYI 382
Query: 245 SDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGEL 304
+DRFLPDKAIDLIDEA S+VRL +P + +E+E++L ++ KEK+ AV+ Q+FEKA L
Sbjct: 383 TDRFLPDKAIDLIDEAASKVRLSSFTVPPDLKEMEQKLEEVRKEKDAAVQSQEFEKAASL 442
Query: 305 RDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDES 364
RD+E L+ ++ + ++ KE + +T++ +VGP DI +V+ WTGIPV K++ +ES
Sbjct: 443 RDKEQKLREELESTRNRWKE-DQGKTDS-EVGP----EDIAEVVANWTGIPVRKLAEEES 496
Query: 365 DRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAK 424
DRLL +EE LHKRVIGQDEAV ++SRAIRRAR GLK+P RPI SFIF GPTGVGK+ELA+
Sbjct: 497 DRLLNLEEILHKRVIGQDEAVLSVSRAIRRARAGLKDPKRPIGSFIFLGPTGVGKTELAR 556
Query: 425 ALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLF 484
ALA FG EEA+IR+DMSE+ME+H+ S+L+G+PPGYVGY EGGQLTE VRR+PY+VVLF
Sbjct: 557 ALAEAMFGDEEAIIRIDMSEYMEKHSTSRLVGAPPGYVGYDEGGQLTEKVRRKPYSVVLF 616
Query: 485 DEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDL 544
DE+EKAHP+VFN+MLQ+LEDGRLTD KGRTVDF+NT++IMTSNVG+++I K +R+GF +
Sbjct: 617 DEVEKAHPEVFNVMLQVLEDGRLTDGKGRTVDFRNTVIIMTSNVGANLI-KQNKRLGFAV 675
Query: 545 DYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDR 604
D Y +K V EELK+ FRPEFLNR+D++IVF L + +++I +M ++ R
Sbjct: 676 G-DSAQDEYEAMKENVMEELKKTFRPEFLNRIDDVIVFHSLKEEHLQQIVSLMSNQLRKR 734
Query: 605 LKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVI 664
L+ ++I+ +T+ + + + G++P+YGARPLRRAI + +ED ++E++L IK GD++
Sbjct: 735 LQEQEIDFVLTDAASKYLAKAGFDPTYGARPLRRAIQKHIEDRLSEELLKGSIKRGDTLE 794
Query: 665 VDVDSDGNVTV 675
+D + DG + V
Sbjct: 795 ID-EKDGKLQV 804
>gi|28212201|ref|NP_783145.1| negative regulator of genetic competence mecB/clpC [Clostridium
tetani E88]
gi|28204645|gb|AAO37082.1| negative regulator of genetic competence mecB/clpC [Clostridium
tetani E88]
Length = 811
Score = 825 bits (2132), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 394/648 (60%), Positives = 520/648 (80%), Gaps = 7/648 (1%)
Query: 23 PTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEG 82
PTL E+G +LT +A EGKLDPV+GR + +RV+QIL RRTKNNPCLIG+PGVGKTAIAEG
Sbjct: 164 PTLNEFGRDLTDMAMEGKLDPVIGRDKETQRVLQILCRRTKNNPCLIGDPGVGKTAIAEG 223
Query: 83 LAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDE 142
LAQ+I G++P+ ++ K+V+TLD+ ++AG KYRGEFE+RLKK+MEEI++S +ILFIDE
Sbjct: 224 LAQKIVEGNIPEILKDKRVVTLDLSSMIAGAKYRGEFEDRLKKVMEEIRKSGNVILFIDE 283
Query: 143 VHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVP 202
+HT+IGAGAAEGAIDA+NILKP+LARGE+QCIGATT+DEYRKHIEKD ALERRFQP+ V
Sbjct: 284 IHTIIGAGAAEGAIDASNILKPALARGEIQCIGATTIDEYRKHIEKDSALERRFQPITVG 343
Query: 203 EPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGS 262
EP+ +E I IL+GLR++YE HH+ TDEA+ +A LS +YI++R+LPDKAIDL+DEA S
Sbjct: 344 EPTKEEAILILRGLRDKYEAHHRANITDEAIEAAVNLSDRYITERYLPDKAIDLMDEAAS 403
Query: 263 RVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKG 322
+VR+ + P + +ELE+ L ++TKEK +A+R QDFEKA +LRD E DLK ++ L
Sbjct: 404 KVRIENMIAPTDMKELEENLEKVTKEKEDAIRVQDFEKAAQLRDHEKDLKYRLENLKSDW 463
Query: 323 KEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQD 382
K + T V E I +VS WT IPV K++ ES+RLLK+EETLH RVIGQ+
Sbjct: 464 KTQKQVAT------LTVDETQIAAVVSKWTNIPVRKLTEKESERLLKLEETLHNRVIGQN 517
Query: 383 EAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDM 442
EAVK++SRA+RRARVGLK+PNRPI SFIF GPTGVGK+EL+KALA FG E +MIR+DM
Sbjct: 518 EAVKSVSRAVRRARVGLKDPNRPIGSFIFLGPTGVGKTELSKALAEAMFGDESSMIRIDM 577
Query: 443 SEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQIL 502
SE+ME+H VS+LIGSPPGYVGY EGGQLTE VRR PY+V+LFDEIEKAHPDVFN++LQIL
Sbjct: 578 SEYMEKHAVSRLIGSPPGYVGYDEGGQLTEKVRRHPYSVILFDEIEKAHPDVFNILLQIL 637
Query: 503 EDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTE 562
EDGRLTD KG+TV+FKNT++IMTSNVG+S I+K + +GF + D+ +S Y ++K V E
Sbjct: 638 EDGRLTDGKGKTVNFKNTIIIMTSNVGASTIKK-QKSLGFAISDDKIESEYEQMKENVME 696
Query: 563 ELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERV 622
ELK+ FRPEFLNR+D++IVF +L + ++++I +ML+ V RLK +DI + ++ ++ +
Sbjct: 697 ELKRSFRPEFLNRIDDIIVFHKLREEDLEKIVALMLESVTHRLKNQDINISFDKKSQKFL 756
Query: 623 VEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSD 670
++G++P YGARPLRRAI + +ED ++E++L I++GD V+V V+ +
Sbjct: 757 AKKGFDPVYGARPLRRAITKAVEDKLSEEILKGSIEKGDKVLVSVNEE 804
>gi|256752490|ref|ZP_05493347.1| ATPase AAA-2 domain protein [Thermoanaerobacter ethanolicus CCSD1]
gi|256748625|gb|EEU61672.1| ATPase AAA-2 domain protein [Thermoanaerobacter ethanolicus CCSD1]
Length = 816
Score = 825 bits (2132), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/666 (61%), Positives = 533/666 (80%), Gaps = 8/666 (1%)
Query: 8 AVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPC 67
A G PTL ++G +LT+LA +GKLDPV+GR+ +IERV+QIL RRTKNNP
Sbjct: 148 AGGPAKAAKVKNTNTPTLNQFGRDLTELARDGKLDPVIGREKEIERVIQILSRRTKNNPV 207
Query: 68 LIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLM 127
LIGEPGVGKTAI EGLAQ+I G++P+ ++ K+V+TLDM +VAGTKYRGEFE+RLK ++
Sbjct: 208 LIGEPGVGKTAIVEGLAQKIVEGEIPEILKDKRVVTLDMASMVAGTKYRGEFEDRLKTVL 267
Query: 128 EEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIE 187
E+ ++ +ILFIDE+HTLIGAGAAEGAIDA+NILKP+LARGE+Q +GATTLDEYRK++E
Sbjct: 268 NEVIKAGNVILFIDEMHTLIGAGAAEGAIDASNILKPALARGEIQVVGATTLDEYRKYVE 327
Query: 188 KDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDR 247
+DPALERRFQP+ V EP+V+ETI+ILKGLR++YE HH+++ TDEAL +AA+LS++YI+DR
Sbjct: 328 RDPALERRFQPIIVDEPTVEETIEILKGLRDKYEAHHRVKITDEALEAAARLSHRYIADR 387
Query: 248 FLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDR 307
FLPDKAIDLIDEA SRVRL+ P E +ELE ++ + KEK EA+R Q++EKA ++RD
Sbjct: 388 FLPDKAIDLIDEAASRVRLKTVTAPPEIKELEDKINDLIKEKEEAIRTQEYEKAAKIRDE 447
Query: 308 EMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRL 367
E L+ ++ L K K + + VGP +I +VS WTGIPV+K++ +ES+RL
Sbjct: 448 EQKLREELEKL--KAKWQQNSLSNEKSVGP----EEIAQVVSLWTGIPVKKLAEEESERL 501
Query: 368 LKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALA 427
L +EE LH+RVIGQDEAV+A++RAIRRARVGLK+P RPI SFIF GPTGVGK+EL KALA
Sbjct: 502 LHLEEVLHERVIGQDEAVEAVARAIRRARVGLKDPKRPIGSFIFLGPTGVGKTELTKALA 561
Query: 428 AYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEI 487
FG E AMIRLDMSE+MERHTVSKLIGSPPGYVG+ EGGQLTE VRR+PY+V+L DEI
Sbjct: 562 EALFGDENAMIRLDMSEYMERHTVSKLIGSPPGYVGFEEGGQLTEKVRRKPYSVILLDEI 621
Query: 488 EKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYD 547
EKAHPDVFN++LQILEDGRLTDSKGRTVDFKNT++IMTSNVG+ +++K +GF
Sbjct: 622 EKAHPDVFNILLQILEDGRLTDSKGRTVDFKNTVIIMTSNVGAELLKKQS-TLGFMPQEK 680
Query: 548 EKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKT 607
E +SY++IK + EL++ FRPEFLNR+DE+IVF QL+K ++++IADIM+KE+ DRLK
Sbjct: 681 EDKASYDKIKETLMAELRKTFRPEFLNRVDEIIVFHQLSKEDIEKIADIMIKELNDRLKE 740
Query: 608 KDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDV 667
DI+L T +E ++++GY+P+YGARPLRR I R++E+ ++E ML E+K GD +IV
Sbjct: 741 NDIKLDFTPEAKEEIIKQGYDPNYGARPLRRVIQRIVENQLSELMLQGEVKPGDELIVTA 800
Query: 668 DSDGNV 673
DG +
Sbjct: 801 -KDGKI 805
>gi|212637926|ref|YP_002314446.1| Class III stress response-related ATPase, ClpC [Anoxybacillus
flavithermus WK1]
gi|212559406|gb|ACJ32461.1| Class III stress response-related ATPase, ClpC [Anoxybacillus
flavithermus WK1]
Length = 813
Score = 825 bits (2131), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/668 (60%), Positives = 524/668 (78%), Gaps = 10/668 (1%)
Query: 10 GAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLI 69
+G GG++ PTL+ +LT +A EG LDPV+GR +I+RV+++L RRTKNNP LI
Sbjct: 151 ASGHHGGTTHANTPTLDSLARDLTAIAREGGLDPVIGRSKEIQRVIEVLSRRTKNNPVLI 210
Query: 70 GEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEE 129
GEPGVGKTAIAEGLAQ+I + +VP+T+ K+V+TLDMG +VAGTKYRGEFE+RLKK+M+E
Sbjct: 211 GEPGVGKTAIAEGLAQQIVNNEVPETLRDKRVMTLDMGTVVAGTKYRGEFEDRLKKVMDE 270
Query: 130 IKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKD 189
I+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTLDEYRK+IEKD
Sbjct: 271 IRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEYRKYIEKD 330
Query: 190 PALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFL 249
ALERRFQP+ V EP+V+E+IQILKGLR+RYE HH++ +DEA+ A +LS +YISDRFL
Sbjct: 331 AALERRFQPIHVGEPTVEESIQILKGLRDRYEAHHRVSISDEAIEQAVKLSDRYISDRFL 390
Query: 250 PDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREM 309
PDKAIDLIDEA S+VRLR P +ELE++L +I KEK+ AV+ Q+FEKA LRD E
Sbjct: 391 PDKAIDLIDEACSKVRLRSFTTPPNLKELEQKLEEIRKEKDAAVQSQEFEKAASLRDAEQ 450
Query: 310 DLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLK 369
L+ Q+ KE + G VT DI +VS+WTGIPV K++ E++RLLK
Sbjct: 451 KLREQLEETKRAWKE------KQGQENSEVTVEDIAAVVSSWTGIPVSKLAQTETERLLK 504
Query: 370 MEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAY 429
+EE LH RVIGQ+EAVKA+++A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+ALA
Sbjct: 505 LEEILHSRVIGQEEAVKAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAEA 564
Query: 430 YFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEK 489
FG E+AMIR+DMSE+ME+H+ S+L+GSPPGYVGY EGGQLTE VRR+PY+V+L DEIEK
Sbjct: 565 MFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPYSVILLDEIEK 624
Query: 490 AHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEK 549
AHPDVFN++LQ+LEDGRLTDSKGRTVDF+NT++IMTSNVG+ +++ + +GF++ ++
Sbjct: 625 AHPDVFNILLQVLEDGRLTDSKGRTVDFRNTIIIMTSNVGADALKR-NKYVGFNV--QDE 681
Query: 550 DSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKD 609
Y +K V +ELK+ FRPEFLNR+DE+IVF L K +KEI +M++++ RL+ +
Sbjct: 682 SQQYKDMKGKVMDELKKAFRPEFLNRIDEIIVFHSLEKKHLKEIVSLMVEQLKKRLQEQQ 741
Query: 610 IELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDS 669
I+L++T+ E++ EEGY+ YGARPLRRAI + +ED ++E++L I G V++DV
Sbjct: 742 IDLELTDAAIEKLAEEGYDLEYGARPLRRAIQKHVEDRLSEELLKGTIGSGQKVVMDV-K 800
Query: 670 DGNVTVLN 677
DG VL
Sbjct: 801 DGQFVVLT 808
>gi|258512699|ref|YP_003186133.1| ATPase AAA-2 domain-containing protein [Alicyclobacillus
acidocaldarius subsp. acidocaldarius DSM 446]
gi|257479425|gb|ACV59744.1| ATPase AAA-2 domain protein [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
Length = 812
Score = 825 bits (2130), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/648 (62%), Positives = 521/648 (80%), Gaps = 11/648 (1%)
Query: 23 PTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEG 82
PTL+ +LT++A +GKLDPV+GR+ +IERV+Q+L RRTKNNP LIGEPGVGKTAIAEG
Sbjct: 160 PTLDSLARDLTQMARDGKLDPVIGREKEIERVIQVLSRRTKNNPVLIGEPGVGKTAIAEG 219
Query: 83 LAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDE 142
LAQRI +GDVP+T+ K+V+ LDMG +VAGTKYRGEFE+RLKK+M+EI+Q+ +ILFIDE
Sbjct: 220 LAQRIVTGDVPETLRNKRVMVLDMGTVVAGTKYRGEFEDRLKKIMDEIRQAGNVILFIDE 279
Query: 143 VHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVP 202
+HTLIGAG AEGAIDA+NILKP+LARGELQCIGATTLDEYRKHIEKDPALERRFQP+ V
Sbjct: 280 LHTLIGAGGAEGAIDASNILKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPIMVD 339
Query: 203 EPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGS 262
EPS +E ++ILKGLR+RYE HH+++ TDEAL +A +LS +YISDRFLPDKAIDLIDEA S
Sbjct: 340 EPSPEEALEILKGLRDRYEAHHRVKITDEALEAAVKLSDRYISDRFLPDKAIDLIDEAAS 399
Query: 263 RVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKG 322
RVRLR P +ELE++L ++ EK+ AV+ Q+FE A LRD E +K ++ L
Sbjct: 400 RVRLRTHTAPPNLKELEQKLEKVRSEKDAAVQSQEFELAASLRDEEQKIKEELERL---- 455
Query: 323 KEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQD 382
KE + + DV VT DI HIVS+WTGIPV+++ DES+RLL +E+ LH+RVIGQD
Sbjct: 456 KETWQKTQQLDDVR--VTAEDIAHIVSSWTGIPVQQLQQDESERLLNLEKILHERVIGQD 513
Query: 383 EAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDM 442
EAV+A+++AIRRAR GLK+P RPI SFIF GPTGVGK+ELA+ALA FG E+A+IR+DM
Sbjct: 514 EAVEAVAKAIRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAEALFGDEDALIRIDM 573
Query: 443 SEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQIL 502
SE+MERH+ S+L+GSPPGYVGY EGGQLTE VRR+PY+VVL DEIEKAHP+VFN++LQ+L
Sbjct: 574 SEYMERHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPYSVVLLDEIEKAHPEVFNILLQVL 633
Query: 503 EDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTE 562
+DGRLTD KGRTVDF+NT++IMTSNVG+ + KGG +GF + D+ Y +K V +
Sbjct: 634 DDGRLTDGKGRTVDFRNTVIIMTSNVGAEELRKGG-ALGFKREEDK----YLGMKDKVMD 688
Query: 563 ELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERV 622
ELK+ FRPEFLNR+DE+IVF L + ++ I D M+ + RLK ++IE ++T+ ++ +
Sbjct: 689 ELKRTFRPEFLNRIDEIIVFHPLDETHIERIVDKMVDNLKRRLKEQEIEFELTDEAKKFL 748
Query: 623 VEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSD 670
+ G++P YGARPL+RAI+R +ED ++ ++A EIK+GD V++ VD D
Sbjct: 749 AKVGFDPQYGARPLQRAIVRNVEDLLSSALIAGEIKKGDRVLLGVDGD 796
>gi|167036769|ref|YP_001664347.1| ATPase [Thermoanaerobacter pseudethanolicus ATCC 33223]
gi|167039489|ref|YP_001662474.1| ATPase [Thermoanaerobacter sp. X514]
gi|307725185|ref|YP_003904936.1| ATPase [Thermoanaerobacter sp. X513]
gi|320115191|ref|YP_004185350.1| ATPase [Thermoanaerobacter brockii subsp. finnii Ako-1]
gi|166853729|gb|ABY92138.1| ATPase AAA-2 domain protein [Thermoanaerobacter sp. X514]
gi|166855603|gb|ABY94011.1| ATPase AAA-2 domain protein [Thermoanaerobacter pseudethanolicus
ATCC 33223]
gi|307582246|gb|ADN55645.1| ATPase AAA-2 domain protein [Thermoanaerobacter sp. X513]
gi|319928282|gb|ADV78967.1| ATPase AAA-2 domain protein [Thermoanaerobacter brockii subsp.
finnii Ako-1]
Length = 816
Score = 825 bits (2130), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/666 (61%), Positives = 533/666 (80%), Gaps = 8/666 (1%)
Query: 8 AVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPC 67
A G PTL ++G +LT+LA +GKLDPV+GR+ +IERV+QIL RRTKNNP
Sbjct: 148 AGGPAKAAKVKNTNTPTLNQFGRDLTELARDGKLDPVIGREKEIERVIQILSRRTKNNPV 207
Query: 68 LIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLM 127
LIGEPGVGKTAI EGLAQ+I G++P+ ++ K+V+TLDM +VAGTKYRGEFE+RLK ++
Sbjct: 208 LIGEPGVGKTAIVEGLAQKIVEGEIPEILKDKRVVTLDMASMVAGTKYRGEFEDRLKTVL 267
Query: 128 EEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIE 187
E+ ++ +ILFIDE+HTLIGAGAAEGAIDA+NILKP+LARGE+Q +GATTLDEYRK++E
Sbjct: 268 NEVIKAGNVILFIDEMHTLIGAGAAEGAIDASNILKPALARGEIQVVGATTLDEYRKYVE 327
Query: 188 KDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDR 247
+DPALERRFQP+ V EP+V+ETI+ILKGLR++YE HH+++ TDEAL +AA+LS++YI+DR
Sbjct: 328 RDPALERRFQPIIVDEPTVEETIEILKGLRDKYEAHHRVKITDEALEAAARLSHRYIADR 387
Query: 248 FLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDR 307
FLPDKAIDLIDEA SRVRL+ P E +ELE ++ + KEK EA+R Q++EKA ++RD
Sbjct: 388 FLPDKAIDLIDEAASRVRLKTVTAPPEIKELEDKINDLIKEKEEAIRTQEYEKAAKIRDE 447
Query: 308 EMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRL 367
E L+ ++ L K K + + VGP +I +VS WTGIPV+K++ +ES+RL
Sbjct: 448 EQKLREELEKL--KAKWQQNSLSNEKSVGP----EEIAQVVSLWTGIPVKKLAEEESERL 501
Query: 368 LKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALA 427
L +EE LH+RVIGQDEAV+A++RAIRRARVGLK+P RPI SFIF GPTGVGK+EL KALA
Sbjct: 502 LHLEEVLHERVIGQDEAVEAVARAIRRARVGLKDPKRPIGSFIFLGPTGVGKTELTKALA 561
Query: 428 AYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEI 487
FG E AMIRLDMSE+MERHTVSKLIGSPPGYVG+ EGGQLTE VRR+PY+V+L DEI
Sbjct: 562 EALFGDENAMIRLDMSEYMERHTVSKLIGSPPGYVGFEEGGQLTEKVRRKPYSVILLDEI 621
Query: 488 EKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYD 547
EKAHPDVFN++LQILEDGRLTDSKGRTVDFKNT++IMTSNVG+ +++K +GF
Sbjct: 622 EKAHPDVFNILLQILEDGRLTDSKGRTVDFKNTVIIMTSNVGAELLKKQS-TLGFMPQEK 680
Query: 548 EKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKT 607
E +SY++IK + EL++ FRPEFLNR+DE+IVF QL+K ++++IADIM+KE+ DRLK
Sbjct: 681 EDKASYDKIKETLMAELRKTFRPEFLNRVDEIIVFHQLSKEDIEKIADIMIKELNDRLKE 740
Query: 608 KDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDV 667
DI+L T +E ++++GY+P+YGARPLRR I R++E+ ++E ML E+K GD +IV
Sbjct: 741 NDIKLDFTPEAKEEIIKQGYDPNYGARPLRRVIQRIVENQLSELMLQGEVKPGDELIVTA 800
Query: 668 DSDGNV 673
DG +
Sbjct: 801 -KDGKI 805
>gi|56418613|ref|YP_145931.1| ATP-dependent Clp protease ATPase [Geobacillus kaustophilus HTA426]
gi|297528454|ref|YP_003669729.1| ATPase AAA [Geobacillus sp. C56-T3]
gi|375006890|ref|YP_004980520.1| negative regulator of genetic competence [Geobacillus
thermoleovorans CCB_US3_UF5]
gi|448236388|ref|YP_007400446.1| ATP-dependent Clp protease [Geobacillus sp. GHH01]
gi|56378455|dbj|BAD74363.1| ATP-dependent Clp protease ATPase subunit [Geobacillus kaustophilus
HTA426]
gi|297251706|gb|ADI25152.1| ATPase AAA-2 domain protein [Geobacillus sp. C56-T3]
gi|359285736|gb|AEV17420.1| Negative regulator of genetic competence [Geobacillus
thermoleovorans CCB_US3_UF5]
gi|445205230|gb|AGE20695.1| ATP-dependent Clp protease [Geobacillus sp. GHH01]
Length = 810
Score = 825 bits (2130), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/667 (60%), Positives = 529/667 (79%), Gaps = 10/667 (1%)
Query: 11 AGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIG 70
+G GGG+S PTL+ +LT +A EG+LDPV+GR +I+RV+++L RRTKNNP LIG
Sbjct: 149 SGHGGGASHVSTPTLDSLARDLTAIAREGRLDPVIGRSKEIQRVIEVLSRRTKNNPVLIG 208
Query: 71 EPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEI 130
EPGVGKTAIAEGLAQ+I + +VP+T+ K+V+TLDMG +VAGTKYRGEFE+RLKK+M+EI
Sbjct: 209 EPGVGKTAIAEGLAQQIVNNEVPETLRDKRVMTLDMGTVVAGTKYRGEFEDRLKKVMDEI 268
Query: 131 KQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDP 190
+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKP+LARGELQCIGATTLDEYRK+IEKD
Sbjct: 269 RQAGNIILFIDELHTLIGAGGAEGAIDASNILKPALARGELQCIGATTLDEYRKYIEKDA 328
Query: 191 ALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLP 250
ALERRFQP+ V EP+V+E+IQILKGLR+RYE HH++ +DEA+V A +LS +YI+DRFLP
Sbjct: 329 ALERRFQPIYVDEPTVEESIQILKGLRDRYEAHHRVSISDEAIVQAVKLSDRYITDRFLP 388
Query: 251 DKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMD 310
DKAIDLIDEA S+VRLR P + +ELE++L ++ KEK+ AV+ Q+FEKA LRD E
Sbjct: 389 DKAIDLIDEACSKVRLRSFTAPPKLKELEQKLEEVRKEKDAAVQSQEFEKAASLRDMEQR 448
Query: 311 LKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKM 370
L+ ++ KE + G VT DI +VS+WTGIPV K++ E++RLLK+
Sbjct: 449 LREELEETKRAWKE------KQGQENLEVTVEDIAAVVSSWTGIPVSKLAETETERLLKL 502
Query: 371 EETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYY 430
EE LH RV+GQDEAVKA+++A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+ALA
Sbjct: 503 EEILHSRVVGQDEAVKAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAEAM 562
Query: 431 FGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKA 490
FG E+A+IR+DMSE+ME+H+ S+LIGSPPGYVGY EGGQLTE VRR+PY+VVL DE+EKA
Sbjct: 563 FGDEDALIRIDMSEYMEKHSTSRLIGSPPGYVGYEEGGQLTEKVRRKPYSVVLLDEMEKA 622
Query: 491 HPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKD 550
HPDVFN++LQ+LEDGRLTDSKGRTVDF+NT++IMTSNVG+ +++ + +GF++ + +
Sbjct: 623 HPDVFNILLQVLEDGRLTDSKGRTVDFRNTIIIMTSNVGADALKR-NKYVGFNI--QDGN 679
Query: 551 SSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDI 610
Y +KS V +ELK+ FRPEFLNR+DE+IVF L K +K+I +M + RLK +DI
Sbjct: 680 QQYKDMKSKVMDELKKAFRPEFLNRIDEIIVFHSLEKDHLKQIVRLMADTLVKRLKEQDI 739
Query: 611 ELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSD 670
+L++TE E++ EG++P YGARPLRRA+ + +ED ++E++L I +G V+VDV D
Sbjct: 740 DLELTEAAIEKIAAEGFDPEYGARPLRRALQKHVEDRLSEELLKGTIAKGQKVVVDV-KD 798
Query: 671 GNVTVLN 677
G VL+
Sbjct: 799 GEFVVLS 805
>gi|392958574|ref|ZP_10324083.1| Class III stress response-related ATPase, ClpC [Bacillus macauensis
ZFHKF-1]
gi|391875475|gb|EIT84086.1| Class III stress response-related ATPase, ClpC [Bacillus macauensis
ZFHKF-1]
Length = 810
Score = 824 bits (2129), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 398/656 (60%), Positives = 523/656 (79%), Gaps = 9/656 (1%)
Query: 15 GGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGV 74
G S+ PTL+ +LT +A++G LDPV+GR +I+RV+++L RRTKNNP LIGEPGV
Sbjct: 153 GSSANANTPTLDSLARDLTAVAKDGSLDPVIGRAKEIQRVIEVLSRRTKNNPVLIGEPGV 212
Query: 75 GKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSD 134
GKTAIAEGLAQ+I + +VP+T+ K+V+TLDMG +VAGTKYRGEFE+RLKK+M+EI+Q+
Sbjct: 213 GKTAIAEGLAQQIINNEVPETLRDKRVMTLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAG 272
Query: 135 EIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALER 194
IILFIDE+HTLIGAG AEGAIDA+NILKP+LARGELQCIGATTLDEYRK+IEKD ALER
Sbjct: 273 NIILFIDELHTLIGAGGAEGAIDASNILKPALARGELQCIGATTLDEYRKYIEKDAALER 332
Query: 195 RFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAI 254
RFQP+ V EP+ DE+ QIL+GLR+RYE HH+++ TDEA+ +A LS +YISDRFLPDKAI
Sbjct: 333 RFQPITVNEPTKDESTQILQGLRDRYEAHHRVKITDEAIEAAVTLSDRYISDRFLPDKAI 392
Query: 255 DLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQ 314
DLIDEA S+VRLR P +ELE +L ++ KEK+ AV+ Q+FEKA LRD E L+ +
Sbjct: 393 DLIDEAASKVRLRSYTAPPNLKELEVKLEEVRKEKDAAVQSQEFEKAASLRDTEQRLREE 452
Query: 315 ISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETL 374
+ + KE + G VT DI +VS+WTG+PV K++ +E++RLLK+EE L
Sbjct: 453 LEKTKNVWKE------KQGQENTEVTPEDIAQVVSSWTGVPVAKLAQEETERLLKLEEIL 506
Query: 375 HKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSE 434
H RVIGQDEAV++IS+AIRRAR GLK+P RPI SFIF GPTGVGK+ELA+A+A FG E
Sbjct: 507 HNRVIGQDEAVQSISKAIRRARAGLKDPKRPIGSFIFLGPTGVGKTELARAVAESLFGDE 566
Query: 435 EAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDV 494
+A+IR+DMSE+ME+HT S+L+GSPPGYVG+ EGGQLTE VRR+PY+V+L DEIEKAHP+V
Sbjct: 567 DAIIRIDMSEYMEKHTTSRLVGSPPGYVGHEEGGQLTEKVRRKPYSVILLDEIEKAHPEV 626
Query: 495 FNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYN 554
FN++LQ+LEDGRLTDSKGRTVDF+NT++IMTSNVG+S +++ + +GF + + D Y+
Sbjct: 627 FNILLQVLEDGRLTDSKGRTVDFRNTVVIMTSNVGASTLKR-NKTLGFTVHSE--DQQYS 683
Query: 555 RIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQV 614
+KS V +ELK+ FRPEFLNR+DE+IVF L K +KEI +M + RL+ +DIE+++
Sbjct: 684 DMKSKVMDELKKAFRPEFLNRIDEIIVFHGLEKKHLKEIVTLMADSLIQRLRDQDIEIEL 743
Query: 615 TERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSD 670
T+ +++ EEGY+P YGARPLRRA+ R +ED ++E++L I +G+ V +DVD++
Sbjct: 744 TDAALDKITEEGYDPDYGARPLRRALQRKIEDRLSEELLRGNISKGNVVKIDVDNN 799
>gi|118444397|ref|YP_877171.1| negative regulator of genetic competence clpC/mecB [Clostridium
novyi NT]
gi|118134853|gb|ABK61897.1| Negative regulator of genetic competence clpC/mecB [Clostridium
novyi NT]
Length = 813
Score = 824 bits (2129), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/664 (60%), Positives = 524/664 (78%), Gaps = 10/664 (1%)
Query: 10 GAGVGGGSS---GNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNP 66
G V G S+ + PTL+++G +LTK+AEEGKLDPV+GR + ERV++IL RR KNNP
Sbjct: 149 GKQVSGESNERVSHNTPTLDKHGRDLTKMAEEGKLDPVIGRGAETERVLEILCRRIKNNP 208
Query: 67 CLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKL 126
CLIG+PGVGKTAIAEGLAQ+I G++P+ ++ K+VI LD+ +VAG+KYRGEFEER+KK+
Sbjct: 209 CLIGDPGVGKTAIAEGLAQKIVQGNIPEILKNKRVIALDISSMVAGSKYRGEFEERVKKI 268
Query: 127 MEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHI 186
M+EI + +ILFIDE+HT++GAG AEGAIDA+NILKP+LARGE+QCIGATT+DEYRK+I
Sbjct: 269 MDEIYKDKNVILFIDEIHTIVGAGGAEGAIDASNILKPALARGEIQCIGATTIDEYRKYI 328
Query: 187 EKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISD 246
EKD ALERRFQPV V EP+ +E+I+ILKGLR++YE HH ++ TD+A+V+A +LS +YI+D
Sbjct: 329 EKDSALERRFQPVNVGEPTKEESIEILKGLRDKYEAHHGVKITDDAIVAAVELSDRYITD 388
Query: 247 RFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRD 306
RFLPDKAIDLIDEAG++VR+++ P +++E EL ++ KEK +AV QDFEKA LRD
Sbjct: 389 RFLPDKAIDLIDEAGAKVRIKNLTAPPSLKDMEAELEKVVKEKEDAVIVQDFEKAASLRD 448
Query: 307 REMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDR 366
+E +LK Q+ D K+ S TE +V+E I +VS W+ +PVEK++ E+DR
Sbjct: 449 KEKNLKQQLKDFTDNWKKQSHMVTE------IVSEDQIAEVVSTWSNVPVEKLTEKEADR 502
Query: 367 LLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKAL 426
LLK+EETLHKRVIGQ+EAVK+I+RA+RRARVGLK+ RPI SFIF GPTGVGK+EL+KAL
Sbjct: 503 LLKLEETLHKRVIGQNEAVKSIARAVRRARVGLKDSKRPIGSFIFLGPTGVGKTELSKAL 562
Query: 427 AAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDE 486
A FG E MIR+DMSE+ME+H VS+L+GSPPGYVG+ EGGQLTE VRR PY+V+LFDE
Sbjct: 563 AEAMFGDENNMIRIDMSEYMEKHAVSRLVGSPPGYVGHDEGGQLTEQVRRHPYSVILFDE 622
Query: 487 IEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDY 546
IEKAHP+VFN++LQILEDGRLTDSKG+TVDFKNT++I+TSNVG+S I K +GF
Sbjct: 623 IEKAHPEVFNILLQILEDGRLTDSKGKTVDFKNTIIILTSNVGASRINKQN-TLGFSRSE 681
Query: 547 DEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLK 606
DE + Y ++K V EELK FRPEFLNR+D++IVF L + +KEI +ML EV +RLK
Sbjct: 682 DEAEDEYEKMKDNVMEELKNSFRPEFLNRIDDIIVFHSLDEENLKEIVKLMLDEVSNRLK 741
Query: 607 TKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVD 666
KDI + + + +V++G + +YGARPLRR I R++ED ++E++L IK+GD V
Sbjct: 742 DKDIYIDFDDETEKLLVKKGIDVTYGARPLRRTITRIIEDKLSEEILKGVIKKGDKVYTT 801
Query: 667 VDSD 670
V+++
Sbjct: 802 VENN 805
>gi|125974293|ref|YP_001038203.1| ATPase AAA-2 [Clostridium thermocellum ATCC 27405]
gi|256003489|ref|ZP_05428479.1| ATPase AAA-2 domain protein [Clostridium thermocellum DSM 2360]
gi|281418347|ref|ZP_06249367.1| ATPase AAA-2 domain protein [Clostridium thermocellum JW20]
gi|385779762|ref|YP_005688927.1| ATPase [Clostridium thermocellum DSM 1313]
gi|419722358|ref|ZP_14249502.1| ATPase AAA-2 domain protein [Clostridium thermocellum AD2]
gi|419725938|ref|ZP_14252972.1| ATPase AAA-2 domain protein [Clostridium thermocellum YS]
gi|125714518|gb|ABN53010.1| ATPase AAA-2 domain protein [Clostridium thermocellum ATCC 27405]
gi|255992513|gb|EEU02605.1| ATPase AAA-2 domain protein [Clostridium thermocellum DSM 2360]
gi|281409749|gb|EFB40007.1| ATPase AAA-2 domain protein [Clostridium thermocellum JW20]
gi|316941442|gb|ADU75476.1| ATPase AAA-2 domain protein [Clostridium thermocellum DSM 1313]
gi|380770714|gb|EIC04600.1| ATPase AAA-2 domain protein [Clostridium thermocellum YS]
gi|380781543|gb|EIC11197.1| ATPase AAA-2 domain protein [Clostridium thermocellum AD2]
Length = 818
Score = 824 bits (2128), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/665 (60%), Positives = 526/665 (79%), Gaps = 7/665 (1%)
Query: 15 GGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGV 74
G SS + PTL ++G +LT++A E K DPV+GR +IERV+QIL RRTKNNPCLIGEPGV
Sbjct: 154 GHSSYSNTPTLNQFGRDLTEMAREAKFDPVIGRDKEIERVIQILSRRTKNNPCLIGEPGV 213
Query: 75 GKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSD 134
GKTAIAEGLAQ+I G++P+ ++ K+V+TLD+ +VAG KYRGEFEERLKK ++EI+++
Sbjct: 214 GKTAIAEGLAQKIVEGNIPEILKDKRVVTLDLSSMVAGAKYRGEFEERLKKALDEIRRAG 273
Query: 135 EIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALER 194
+ILFIDE+HT+IGAGAAEGAIDA+NILKPSLARGE+Q IGATT+DEYRKHIEKD ALER
Sbjct: 274 NVILFIDEMHTIIGAGAAEGAIDASNILKPSLARGEIQVIGATTIDEYRKHIEKDAALER 333
Query: 195 RFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAI 254
RFQP+ V EP+ +E I+IL+GLR++YE HH ++ TDEALV+A +S +YI+DRFLPDKAI
Sbjct: 334 RFQPILVGEPTKEEAIEILRGLRDKYEAHHSVKITDEALVAAVNMSDRYITDRFLPDKAI 393
Query: 255 DLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQ 314
DLIDEA SRVRL+ P + + LE+++ ++ KEK +A+ Q+FEKA +RD E LK +
Sbjct: 394 DLIDEAASRVRLKSFTAPPDLKHLEEKVERLRKEKEDAIVCQEFEKAARIRDEEQRLKNE 453
Query: 315 ISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETL 374
+ D ++ ++ T VV+E DI IVS WTGIPV++++ +ES+RL+KME+ L
Sbjct: 454 LEKAKDSWRQKNQTTTN------VVSEDDIAVIVSDWTGIPVKRLAEEESERLMKMEDIL 507
Query: 375 HKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSE 434
HKRVIGQDEAVKAIS+AIRR RVGLK+P RP+ SFIF GPTGVGK+EL+KALA FG E
Sbjct: 508 HKRVIGQDEAVKAISKAIRRGRVGLKDPKRPVGSFIFLGPTGVGKTELSKALAEALFGEE 567
Query: 435 EAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDV 494
AMIR+DMSE+ME+H+VS+L+GSPPGYVGY EGGQLTE VRR+PY+VVLFDEIEKAHPD+
Sbjct: 568 NAMIRIDMSEYMEKHSVSRLVGSPPGYVGYEEGGQLTEKVRRKPYSVVLFDEIEKAHPDI 627
Query: 495 FNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYN 554
FN++LQILEDGRLTDS+GR VDF+NT++IMTSN+G+ +I + +++GF +K SY
Sbjct: 628 FNILLQILEDGRLTDSQGRVVDFRNTVIIMTSNIGARLITE-PKQLGFAPVAQDKKKSYE 686
Query: 555 RIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQV 614
+K+ V ELK+ FRPEFLNR+DE+IVF L + +K+I +M+ + +RLK IE++V
Sbjct: 687 DMKNNVMNELKKNFRPEFLNRIDEIIVFHPLEEEHLKQIVGLMIDNLAERLKQNSIEIEV 746
Query: 615 TERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVT 674
++ + + ++G++P YGARPLRRA+ ++ED +AE+ML +K GD V VDV D V
Sbjct: 747 SDEAKALLAKKGFDPVYGARPLRRAVQSMVEDRLAEEMLEGRVKSGDKVFVDVKDDELVF 806
Query: 675 VLNGS 679
V + S
Sbjct: 807 VKDKS 811
>gi|121535702|ref|ZP_01667506.1| ATPase AAA-2 domain protein [Thermosinus carboxydivorans Nor1]
gi|121305733|gb|EAX46671.1| ATPase AAA-2 domain protein [Thermosinus carboxydivorans Nor1]
Length = 814
Score = 824 bits (2128), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/680 (60%), Positives = 537/680 (78%), Gaps = 11/680 (1%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
M G GA + GG++ P L EYG +L KLA+EGK+DPVVGR+ +IERV+Q+L R
Sbjct: 146 MSGPMPTGHGAAMAGGNT--HTPLLNEYGRDLNKLAQEGKIDPVVGRETEIERVIQVLSR 203
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNP LIGEPGVGKTAIAEGLAQRI G VP+T+ GK+V++L+MG LVAG+KYRGEFE
Sbjct: 204 RTKNNPVLIGEPGVGKTAIAEGLAQRIVEGKVPETLRGKRVVSLNMGSLVAGSKYRGEFE 263
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
ERLKK+M+EI+Q+ +ILFIDE+HTLIGAGAAEGAIDAANILKP+LARGELQ IGATTLD
Sbjct: 264 ERLKKIMDEIRQAGNVILFIDEIHTLIGAGAAEGAIDAANILKPALARGELQTIGATTLD 323
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EY+KHIEKD ALERRFQP+ V EPSV+E I+IL+GLR+RYE HK + TDEA+V+A +LS
Sbjct: 324 EYKKHIEKDAALERRFQPIMVGEPSVEEAIEILRGLRDRYEAFHKAQITDEAIVAAVKLS 383
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
++YI+DRFLPDKAIDL+DEA SRVRLR LP + ++LEK+L ++ EK A+ Q+FE+
Sbjct: 384 HRYITDRFLPDKAIDLMDEAASRVRLRAVSLPPDVKDLEKKLEKLLAEKQAAITAQEFEE 443
Query: 301 AGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVS 360
A ++ E ++ ++ ++ K + G +VTE DI IV+ WTGIPV+K++
Sbjct: 444 AARIKREEDQIRQEL-------EKRQKDWKQRGSGQVIVTEEDIAEIVAKWTGIPVKKLA 496
Query: 361 TDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 420
+ES+RLLK+EE LH+RVIGQD+AVKA++RAIRRAR GLK+P RPI SF+F GPTGVGK+
Sbjct: 497 EEESERLLKLEEILHQRVIGQDDAVKAVARAIRRARAGLKDPKRPIGSFLFLGPTGVGKT 556
Query: 421 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 480
ELA+ALA FG EEAMIR DMSE+ME+HTVS+LIG+PPGYVGY EGGQLT+AVRR PY+
Sbjct: 557 ELARALAEALFGKEEAMIRFDMSEYMEKHTVSRLIGAPPGYVGYEEGGQLTDAVRRHPYS 616
Query: 481 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI 540
V+L DEIEKAH DVFN++LQ+LEDGRLTD +GRTVDF+NT++IMTSNVG+S + K +
Sbjct: 617 VILLDEIEKAHYDVFNILLQVLEDGRLTDGQGRTVDFRNTVIIMTSNVGASHLRKDTAAL 676
Query: 541 GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 600
GF D ++ ++ K+ V EE+K+ FRPEF+NR+DE+IVF LT ++K+I ++ML
Sbjct: 677 GFLADKEQDNAQAA--KTRVMEEVKRTFRPEFINRIDEIIVFNSLTDDDLKQIVELMLAN 734
Query: 601 VFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEG 660
V RL D++L+VT+R + +++EG + YGARPLRRAI +++ED +AE ML R+I G
Sbjct: 735 VAKRLADTDLKLEVTDRAKAELIKEGRDYVYGARPLRRAIQKMVEDEIAELMLRRDITSG 794
Query: 661 DSVIVDVDSDGNVTVLNGSS 680
D+V+VD D +G +T +S
Sbjct: 795 DTVVVDADENGKLTFTKKNS 814
>gi|255527257|ref|ZP_05394138.1| ATPase AAA-2 domain protein [Clostridium carboxidivorans P7]
gi|296187235|ref|ZP_06855631.1| negative regulator of genetic competence ClpC/MecB [Clostridium
carboxidivorans P7]
gi|255509042|gb|EET85401.1| ATPase AAA-2 domain protein [Clostridium carboxidivorans P7]
gi|296048106|gb|EFG87544.1| negative regulator of genetic competence ClpC/MecB [Clostridium
carboxidivorans P7]
Length = 812
Score = 824 bits (2128), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/674 (59%), Positives = 539/674 (79%), Gaps = 14/674 (2%)
Query: 4 ESTEAV-GAGVGGGSSGNK-----MPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQI 57
E TEA+ G G S NK PTL+++G +LT++A+EGKLDPVVGR + +RV++I
Sbjct: 138 ELTEALSGEQTGNNSDFNKSNVEPTPTLDQFGRDLTEMAKEGKLDPVVGRDKETQRVLEI 197
Query: 58 LGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRG 117
L RRTKNNPCLIG+PGVGKTA+AEGLAQ+I G++P+ ++ K+V+TL++ +VAG+KYRG
Sbjct: 198 LCRRTKNNPCLIGDPGVGKTAVAEGLAQKIVVGNIPELLKDKRVVTLELSSMVAGSKYRG 257
Query: 118 EFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGAT 177
EFEERLKK+MEEI++S +ILFIDE+HT++GAGAAEGAIDA+NILKP+LARGE+QCIGAT
Sbjct: 258 EFEERLKKVMEEIRKSGNVILFIDEIHTIVGAGAAEGAIDASNILKPALARGEIQCIGAT 317
Query: 178 TLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAA 237
T+DEYRK+IEKD ALERRFQP+ V EP+ +E + ILKGLR++YE HH+++ TD+A+ +A
Sbjct: 318 TIDEYRKYIEKDSALERRFQPITVGEPNKEEAVLILKGLRDKYEAHHRVKITDDAIEAAV 377
Query: 238 QLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQD 297
LS +YI+DRFLPDKAIDL+DEA S++R+ P + + E++L +ITKEK +++R QD
Sbjct: 378 NLSDRYITDRFLPDKAIDLMDEAASKIRIESLVAPPDLKNSEEQLEKITKEKEDSIRVQD 437
Query: 298 FEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVE 357
FEKA LRD+E +LK ++ L K K + E ++ VV+E +I +VS WT IPVE
Sbjct: 438 FEKAARLRDKEKELKDELEGL----KNNWKTKKEVSNL--VVSEKEIASVVSKWTNIPVE 491
Query: 358 KVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGV 417
K++ ES RLLK+EE LH RV+GQ+EAVK+ISRA+RRARVGLK+P RPI SFIF GPTGV
Sbjct: 492 KLTEKESQRLLKLEEILHNRVVGQNEAVKSISRAVRRARVGLKDPKRPIGSFIFLGPTGV 551
Query: 418 GKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRR 477
GK+EL+KALA FG E MIR+DMSE+ME+HTVS+LIGSPPGYVG+ EGGQLTE VRR
Sbjct: 552 GKTELSKALAEAMFGDENNMIRVDMSEYMEKHTVSRLIGSPPGYVGFDEGGQLTEKVRRN 611
Query: 478 PYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGG 537
PY+VVLFDEIEKAHP+VFN++LQILEDGRLTD KG+T++FKNT++IMTSNVG+S I+K
Sbjct: 612 PYSVVLFDEIEKAHPEVFNILLQILEDGRLTDGKGKTINFKNTIIIMTSNVGASTIKK-Q 670
Query: 538 RRIGFDL-DYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADI 596
+ +GF L +EK++ Y ++K V EELK+ FRPEFLNR+D++IVF QL + ++ I +
Sbjct: 671 KSMGFALGGKNEKENEYEKMKENVMEELKRSFRPEFLNRIDDIIVFHQLQEEDLNHIVKL 730
Query: 597 MLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLARE 656
MLK V RLK +DI ++ TE ++ + +EG++ +YGARPLRRAI +++ED ++E+ML
Sbjct: 731 MLKTVDARLKEQDIYIEFTEEAQKNLAKEGFDLTYGARPLRRAITKIVEDKLSEEMLRGN 790
Query: 657 IKEGDSVIVDVDSD 670
IK+GD + V+V ++
Sbjct: 791 IKKGDKIKVEVKNN 804
>gi|338813698|ref|ZP_08625791.1| clpc ATPase [Acetonema longum DSM 6540]
gi|337274331|gb|EGO62875.1| clpc ATPase [Acetonema longum DSM 6540]
Length = 811
Score = 823 bits (2127), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/658 (61%), Positives = 516/658 (78%), Gaps = 9/658 (1%)
Query: 16 GSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVG 75
G + P + E+G +L +LA+EGK+DPV+GR +IERV+QIL RRTKNNP LIGEPGVG
Sbjct: 157 GQGQSTTPAVNEFGRDLNQLAQEGKIDPVIGRNAEIERVIQILSRRTKNNPVLIGEPGVG 216
Query: 76 KTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDE 135
KTA+AEGLAQ+I G VP+ + K+V++L+M +VAG+KYRGEFEERLKK+MEEI+Q+
Sbjct: 217 KTAVAEGLAQQIVEGRVPEILRDKRVVSLNMASIVAGSKYRGEFEERLKKVMEEIRQAGN 276
Query: 136 IILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERR 195
IILFIDE+HTLIGAGAAEGAIDAANILKPSLARGELQ IGATTLDEY+KHIEKD ALERR
Sbjct: 277 IILFIDELHTLIGAGAAEGAIDAANILKPSLARGELQVIGATTLDEYKKHIEKDAALERR 336
Query: 196 FQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAID 255
FQP+ V EP+V++ I IL+GLR+RYE HK + TDEA+ +A +LS++YI+DRFLPDKAID
Sbjct: 337 FQPIIVGEPTVEDAIAILRGLRDRYEAFHKAQITDEAIDAAVKLSHRYIADRFLPDKAID 396
Query: 256 LIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQI 315
L+DEA S+VRL+ LP + +E+E+ L +I+ EK A + Q+FEKA +LRD E ++ ++
Sbjct: 397 LMDEAASKVRLQAFSLPPDVKEIEQRLERISLEKEAASKAQEFEKAAQLRDEEKQVREEL 456
Query: 316 SALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLH 375
K G VVT DI +V++WTGIPV+K++ +ES+RLLK+E+ LH
Sbjct: 457 ET-------RQKEWKHKGGEQVVVTAEDIAQVVASWTGIPVKKLAEEESERLLKLEQVLH 509
Query: 376 KRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEE 435
RVIGQ+EAV A+++A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+ALA FG E
Sbjct: 510 NRVIGQEEAVSAVAKAVRRARSGLKDPKRPIGSFIFLGPTGVGKTELARALAEAMFGDEN 569
Query: 436 AMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVF 495
AMIRLDMSE+ME+HTVS+L+GSPPGYVGY EGGQLT+A+RR+PY+VVLFDEIEKAH DVF
Sbjct: 570 AMIRLDMSEYMEKHTVSRLVGSPPGYVGYEEGGQLTDAIRRKPYSVVLFDEIEKAHYDVF 629
Query: 496 NMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNR 555
N++LQILEDGRLTDSKGRTVDFKN ++IMTSNVG+ ++K +GF E D
Sbjct: 630 NILLQILEDGRLTDSKGRTVDFKNAVIIMTSNVGAKHLKKDAAAVGFLAGSSENDEKAA- 688
Query: 556 IKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVT 615
KS V EE+K+ FRPEFLNR+DEMIVF LT E+K+I D+MLK+V RL I + V
Sbjct: 689 -KSRVMEEVKRTFRPEFLNRVDEMIVFSSLTSPELKQIIDLMLKDVAKRLSEYAIAVDVQ 747
Query: 616 ERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNV 673
+ +E +++EG++P +GARPLRRAI +L+ED ++E +L RE+ GD+++ DV DG +
Sbjct: 748 DAAKEIIMKEGHDPDFGARPLRRAIQKLVEDPISEMLLRREVAAGDTILADVAEDGQL 805
>gi|218290044|ref|ZP_03494211.1| ATPase AAA-2 domain protein [Alicyclobacillus acidocaldarius LAA1]
gi|218239878|gb|EED07066.1| ATPase AAA-2 domain protein [Alicyclobacillus acidocaldarius LAA1]
Length = 812
Score = 823 bits (2127), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/648 (62%), Positives = 521/648 (80%), Gaps = 11/648 (1%)
Query: 23 PTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEG 82
PTL+ +LT++A +GKLDPV+GR+ +IERV+Q+L RRTKNNP LIGEPGVGKTAIAEG
Sbjct: 160 PTLDSLARDLTQMARDGKLDPVIGREKEIERVIQVLSRRTKNNPVLIGEPGVGKTAIAEG 219
Query: 83 LAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDE 142
LAQRI +GDVP+T+ K+V+ LDMG +VAGTKYRGEFE+RLKK+M+EI+Q+ +ILFIDE
Sbjct: 220 LAQRIVTGDVPETLRNKRVMVLDMGTVVAGTKYRGEFEDRLKKIMDEIRQAGNVILFIDE 279
Query: 143 VHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVP 202
+HTLIGAG AEGAIDA+NILKP+LARGELQCIGATTLDEYRKHIEKDPALERRFQP+ V
Sbjct: 280 LHTLIGAGGAEGAIDASNILKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPIMVD 339
Query: 203 EPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGS 262
EPS +E ++ILKGLR+RYE HH+++ TDEAL +A +LS +YISDRFLPDKAIDLIDEA S
Sbjct: 340 EPSPEEALEILKGLRDRYEAHHRVKITDEALEAAVKLSDRYISDRFLPDKAIDLIDEAAS 399
Query: 263 RVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKG 322
RVRLR P +ELE++L ++ EK+ AV+ Q+FE A LRD E +K ++ L
Sbjct: 400 RVRLRTHTAPPNLKELEQKLEKVRSEKDAAVQSQEFELAASLRDEEQKIKEELERL---- 455
Query: 323 KEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQD 382
KE + + DV VT DI HIVS+WTGIPV+++ DES+RLL +E+ LH+RVIGQD
Sbjct: 456 KETWQKTQQLDDVR--VTAEDIAHIVSSWTGIPVQQLQQDESERLLNLEKILHERVIGQD 513
Query: 383 EAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDM 442
EAV+A+++AIRRAR GLK+P RPI SFIF GPTGVGK+ELA+ALA FG E+A+IR+DM
Sbjct: 514 EAVEAVAKAIRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAEALFGDEDALIRIDM 573
Query: 443 SEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQIL 502
SE+MERH+ S+L+GSPPGYVGY EGGQLTE VRR+PY+VVL DEIEKAHP+VFN++LQ+L
Sbjct: 574 SEYMERHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPYSVVLLDEIEKAHPEVFNILLQVL 633
Query: 503 EDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTE 562
+DGRLTD KGRTVDF+NT++IMTSNVG+ + KGG +GF + D+ Y +K V +
Sbjct: 634 DDGRLTDGKGRTVDFRNTVIIMTSNVGAEELRKGG-ALGFKREEDK----YLGMKDKVMD 688
Query: 563 ELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERV 622
ELK+ FRPEFLNR+DE+IVF L + ++ I D M+ + RLK ++IE ++T+ ++ +
Sbjct: 689 ELKRTFRPEFLNRIDEIIVFHPLDETHIERIVDKMVDNLKRRLKEQEIEFELTDEAKKFL 748
Query: 623 VEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSD 670
+ G++P YGARPL+RAI+R +ED ++ ++A EIK+GD V++ V+ D
Sbjct: 749 AKVGFDPQYGARPLQRAIVRNVEDLLSSALIAGEIKKGDRVLLGVNGD 796
>gi|326391133|ref|ZP_08212679.1| ATPase AAA-2 domain protein [Thermoanaerobacter ethanolicus JW 200]
gi|345018568|ref|YP_004820921.1| ATPase AAA-2 domain-containing protein [Thermoanaerobacter wiegelii
Rt8.B1]
gi|392939610|ref|ZP_10305254.1| ATPase with chaperone activity, ATP-binding subunit
[Thermoanaerobacter siderophilus SR4]
gi|325992832|gb|EGD51278.1| ATPase AAA-2 domain protein [Thermoanaerobacter ethanolicus JW 200]
gi|344033911|gb|AEM79637.1| ATPase AAA-2 domain protein [Thermoanaerobacter wiegelii Rt8.B1]
gi|392291360|gb|EIV99803.1| ATPase with chaperone activity, ATP-binding subunit
[Thermoanaerobacter siderophilus SR4]
Length = 816
Score = 823 bits (2125), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/666 (61%), Positives = 534/666 (80%), Gaps = 8/666 (1%)
Query: 8 AVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPC 67
A G PTL ++G +LT+LA +GKLDPV+GR+ +IERV+QIL RRTKNNP
Sbjct: 148 AGGPAKAAKVKNTNTPTLNQFGRDLTELARDGKLDPVIGREKEIERVIQILSRRTKNNPV 207
Query: 68 LIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLM 127
LIGEPGVGKTAI EGLAQ+I G++P+ ++ K+V+TLDM +VAGTKYRGEFE+RLK ++
Sbjct: 208 LIGEPGVGKTAIVEGLAQKIVEGEIPEILKDKRVVTLDMASMVAGTKYRGEFEDRLKTVL 267
Query: 128 EEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIE 187
E+ ++ +ILFIDE+HTLIGAGAAEGAIDA+NILKP+LARGE+Q +GATTLDEYRK++E
Sbjct: 268 NEVIKAGNVILFIDEMHTLIGAGAAEGAIDASNILKPALARGEIQVVGATTLDEYRKYVE 327
Query: 188 KDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDR 247
+DPALERRFQP+ V EP+V+ETI+ILKGLR++YE HH+++ TDEAL +AA+LS++YI+DR
Sbjct: 328 RDPALERRFQPIIVDEPTVEETIEILKGLRDKYEAHHRVKITDEALEAAARLSHRYIADR 387
Query: 248 FLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDR 307
FLPDKAIDLIDEA SRVRL+ P E +ELE ++ + KEK EA+R Q++EKA ++RD
Sbjct: 388 FLPDKAIDLIDEAASRVRLKTVTAPPEIKELEDKINDLIKEKEEAIRTQEYEKAAKIRDE 447
Query: 308 EMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRL 367
E L+ ++ L K K + + VGP +I +VS WTGIPV+K++ +ES+RL
Sbjct: 448 EQKLREELEKL--KAKWQQNSLSNEKSVGP----EEIAQVVSLWTGIPVKKLAEEESERL 501
Query: 368 LKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALA 427
L +EE LH+RVIGQDEAV+A++RAIRRARVGLK+P RPI SFIF GPTGVGK+EL KALA
Sbjct: 502 LHLEEVLHERVIGQDEAVEAVARAIRRARVGLKDPKRPIGSFIFLGPTGVGKTELTKALA 561
Query: 428 AYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEI 487
FG E AMIRLDMSE+MERHTVSKLIGSPPGYVG+ EGGQLTE VRR+PY+V+L DEI
Sbjct: 562 EALFGDENAMIRLDMSEYMERHTVSKLIGSPPGYVGFEEGGQLTEKVRRKPYSVILLDEI 621
Query: 488 EKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYD 547
EKAHPDVFN++LQILEDGRLTDSKGRTVDFKNT++IMTSNVG+ +++K +GF
Sbjct: 622 EKAHPDVFNILLQILEDGRLTDSKGRTVDFKNTVIIMTSNVGAELLKKQS-TLGFMPQEK 680
Query: 548 EKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKT 607
E +SY++IK + EL++ FRPEFLNR+DE+IVF QL+K ++++IADIM+KE+ +RLK
Sbjct: 681 EDKASYDKIKETLMAELRKTFRPEFLNRVDEIIVFHQLSKEDIEKIADIMIKELNNRLKE 740
Query: 608 KDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDV 667
+I+L+ T +E ++++GY+P+YGARPLRR I R++E+ ++E ML E+K GD +IV
Sbjct: 741 NNIKLEFTPEAKEEIIKQGYDPNYGARPLRRVIQRIVENQLSELMLQGEVKPGDELIVTA 800
Query: 668 DSDGNV 673
DG +
Sbjct: 801 -KDGKI 805
>gi|374603227|ref|ZP_09676209.1| Negative regulator of genetic competence clpC/mecB [Paenibacillus
dendritiformis C454]
gi|374391096|gb|EHQ62436.1| Negative regulator of genetic competence clpC/mecB [Paenibacillus
dendritiformis C454]
Length = 812
Score = 822 bits (2124), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/676 (59%), Positives = 532/676 (78%), Gaps = 12/676 (1%)
Query: 5 STEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKN 64
S+EAV + G S PTL+ +LT A+EG LDPV+GR +IERV+Q+L RRTKN
Sbjct: 144 SSEAVSSH-HGQSQNVSTPTLDGLARDLTAAAKEGNLDPVIGRSKEIERVIQVLSRRTKN 202
Query: 65 NPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLK 124
NP LIGEPGVGKTA+AEGLAQ+I + ++P+T+ K+V+TLDMG +VAGTKYRGEFE+RLK
Sbjct: 203 NPVLIGEPGVGKTAVAEGLAQKIINNEIPETLRDKRVMTLDMGSVVAGTKYRGEFEDRLK 262
Query: 125 KLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRK 184
K+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKP+LARGELQCIGATTLDEYRK
Sbjct: 263 KIMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPALARGELQCIGATTLDEYRK 322
Query: 185 HIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYI 244
+IEKD ALERRFQP+ V +P+++ETI ILKGLR+RYE HH+++ +DEA+ A +LS +YI
Sbjct: 323 YIEKDAALERRFQPITVDQPTIEETILILKGLRDRYEAHHRVKISDEAIEQAVKLSDRYI 382
Query: 245 SDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGEL 304
+DRFLPDKAIDLIDEAGS+VRL +P +ELE L I KEK+ +V+ Q+FEKA L
Sbjct: 383 TDRFLPDKAIDLIDEAGSKVRLNSYTVPPNLKELEARLDDIRKEKDASVQSQEFEKAAAL 442
Query: 305 RDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDES 364
RD E ++ ++ ++ ++ KE + G + VT DI IVS+WTG+PV K+ +E+
Sbjct: 443 RDTEQKMREELDSVRNQWKE------KQGRMDSEVTPEDIAQIVSSWTGVPVVKLKEEET 496
Query: 365 DRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAK 424
RLL MEE LH+RVIGQDEAVKA+SRAIRRAR GLK+P RP+ SFIF GPTGVGK+ELA+
Sbjct: 497 QRLLNMEEVLHERVIGQDEAVKAVSRAIRRARAGLKDPKRPMGSFIFLGPTGVGKTELAR 556
Query: 425 ALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLF 484
ALA FG E A+IR+DMSE+ME+H+ ++L+G+PPGYVGY EGGQLTE VRR+PY+VVL
Sbjct: 557 ALAESLFGDENAVIRIDMSEYMEKHSTARLVGAPPGYVGYEEGGQLTEKVRRKPYSVVLL 616
Query: 485 DEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGF-D 543
DEIEKAHP+VFN++LQ+LEDGRLTDSKGR VDF+NTL+I+TSNVG+ I++ +GF
Sbjct: 617 DEIEKAHPEVFNILLQVLEDGRLTDSKGRVVDFRNTLIILTSNVGAEAIKR-NTTLGFTS 675
Query: 544 LDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFD 603
D +E+D YN +K V ELK+ FRPEFLNR+DE+IVF L + + EI +M +E+
Sbjct: 676 PDNNERD--YNNMKDKVMAELKKSFRPEFLNRIDEIIVFHSLEEKHIAEIVTLMAEELRK 733
Query: 604 RLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSV 663
RLK +D++ Q+T+ + + +EGY+P+YGARPLRRAI + +ED ++E++L +I++GDSV
Sbjct: 734 RLKEQDVDFQLTDAAKAFLAKEGYDPAYGARPLRRAIQKHIEDRLSEELLKGDIEKGDSV 793
Query: 664 IVDVDSDGNVTVLNGS 679
+D + DG++ VL +
Sbjct: 794 TID-EQDGSLVVLRNT 808
>gi|347751623|ref|YP_004859188.1| ATPase AAA [Bacillus coagulans 36D1]
gi|347584141|gb|AEP00408.1| ATPase AAA-2 domain protein [Bacillus coagulans 36D1]
Length = 816
Score = 822 bits (2124), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/665 (61%), Positives = 526/665 (79%), Gaps = 10/665 (1%)
Query: 11 AGVGGGSSGN-KMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLI 69
A V GGS+ + PTL+ +LT +A E LDPV+GR +I+RV+++L RRTKNNP LI
Sbjct: 147 ASVQGGSAASVSTPTLDSLARDLTAIAREDSLDPVIGRSKEIQRVIEVLSRRTKNNPVLI 206
Query: 70 GEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEE 129
GEPGVGKTAIAEGLAQ+I +VP+T+ K+V+TLDMG +VAGTKYRGEFE+RLKK+M+E
Sbjct: 207 GEPGVGKTAIAEGLAQQIVHNEVPETLRDKRVMTLDMGTVVAGTKYRGEFEDRLKKVMDE 266
Query: 130 IKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKD 189
I+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTLDEYRK+IEKD
Sbjct: 267 IRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEYRKYIEKD 326
Query: 190 PALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFL 249
ALERRFQP++V EP++DE+IQILKGLR+RYE HH++ TDEA+ +A +LS +YI+DRFL
Sbjct: 327 AALERRFQPIQVDEPTIDESIQILKGLRDRYEAHHRVSITDEAIEAAVKLSDRYIADRFL 386
Query: 250 PDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREM 309
PDKAIDLIDEAGS+VRLR P +ELE +L ++ KEK+ AV+ Q+FEKA LRD E
Sbjct: 387 PDKAIDLIDEAGSKVRLRSFTTPPNLKELELKLEEVRKEKDAAVQSQEFEKAAALRDTEQ 446
Query: 310 DLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLK 369
L+ Q+ ++ K+ KA+ G VT DI +VS+WTG+PV K++ E++RLL
Sbjct: 447 KLREQL----EETKKNWKAKQ--GQENSEVTVDDIALVVSSWTGVPVTKLAQTETERLLH 500
Query: 370 MEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAY 429
+EE LH RVIGQ+EAV A+++A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+ALA
Sbjct: 501 LEEILHSRVIGQEEAVLAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAEA 560
Query: 430 YFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEK 489
FG E+AMIR+DMSE+ME+H+ S+L+GSPPGYVG+ EGGQLTE VRR+PY+VVL DEIEK
Sbjct: 561 MFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGFEEGGQLTEKVRRKPYSVVLLDEIEK 620
Query: 490 AHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEK 549
AHPDVFN++LQ+L+DGRLTDSKGRTVDF NT++IMTSNVG+ +++ + +GF + D
Sbjct: 621 AHPDVFNILLQVLDDGRLTDSKGRTVDFSNTIVIMTSNVGADALKR-NKSVGFTIQ-DTV 678
Query: 550 DSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKD 609
++ Y +K V EELK+ FRPEFLNR+DE IVF L K ++ EI +M KE+ DRLK
Sbjct: 679 EADYKDMKDKVLEELKKAFRPEFLNRVDETIVFHSLEKKQLNEIVTLMAKELSDRLKEHH 738
Query: 610 IELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDS 669
IEL +T+ +E+V E+GY+P YGARPLRR+I + +ED ++E+ML IKEG V+VDV
Sbjct: 739 IELVLTDAAKEKVAEKGYDPEYGARPLRRSIQKNIEDRLSEEMLKGNIKEGQKVLVDV-K 797
Query: 670 DGNVT 674
DG T
Sbjct: 798 DGEFT 802
>gi|334136731|ref|ZP_08510188.1| negative regulator of genetic competence ClpC/MecB [Paenibacillus
sp. HGF7]
gi|333605752|gb|EGL17109.1| negative regulator of genetic competence ClpC/MecB [Paenibacillus
sp. HGF7]
Length = 815
Score = 822 bits (2123), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/672 (60%), Positives = 525/672 (78%), Gaps = 10/672 (1%)
Query: 5 STEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKN 64
S+E V + G G++ N PTL+ +LT +A+EG LDPV+GR +IERV+Q+L RRTKN
Sbjct: 144 SSEVVSSNHGSGNNVN-TPTLDSLARDLTAIAKEGNLDPVIGRSKEIERVIQVLSRRTKN 202
Query: 65 NPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLK 124
NP LIGEPGVGKTAIAEGLAQ+I + ++P+T++ K+V+TLDMG +VAGTKYRGEFE+RLK
Sbjct: 203 NPVLIGEPGVGKTAIAEGLAQKIINNEIPETLKDKRVMTLDMGSVVAGTKYRGEFEDRLK 262
Query: 125 KLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRK 184
K+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKP+LARGELQCIGATTLDEYRK
Sbjct: 263 KIMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPALARGELQCIGATTLDEYRK 322
Query: 185 HIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYI 244
+IEKD ALERRFQP+ V +P+ +E IQIL GLR+RYE HH+++ TDEA+ A +LS +YI
Sbjct: 323 YIEKDAALERRFQPITVDQPTPEEAIQILHGLRDRYEAHHRVKITDEAIEEAVKLSDRYI 382
Query: 245 SDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGEL 304
DRFLPDKAIDLIDEA S+VRL +P +ELE++L I KEK+ AV+ Q+FEKA L
Sbjct: 383 PDRFLPDKAIDLIDEASSKVRLHSYTVPPSLKELEQKLENIRKEKDAAVQSQEFEKAASL 442
Query: 305 RDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDES 364
RD E L+ ++ + + KE + G + VT DI +V++WTGIPV K++ +E+
Sbjct: 443 RDTEQKLREELDSTKNDWKE------KQGRMDTEVTPDDIAQVVASWTGIPVRKLAEEET 496
Query: 365 DRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAK 424
+RLLKME+ LH RVIGQ+EAVKA+SRAIRRAR GLK+P RP+ SFIF GPTGVGK+ELA+
Sbjct: 497 ERLLKMEDILHNRVIGQEEAVKAVSRAIRRARAGLKDPKRPMGSFIFLGPTGVGKTELAR 556
Query: 425 ALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLF 484
ALA FG E A+IR+DMSE+ME+H+ S+L+G+PPGYVGY EGGQLTE VRR+PY+VVL
Sbjct: 557 ALAESLFGDENAVIRIDMSEYMEKHSTSRLVGAPPGYVGYEEGGQLTEKVRRKPYSVVLL 616
Query: 485 DEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDL 544
DEIEKAHP+VFN++LQ+LEDGRLTDSKGRTVDF+NTL+IMTSNVG+ I+K +GF
Sbjct: 617 DEIEKAHPEVFNILLQVLEDGRLTDSKGRTVDFRNTLIIMTSNVGADTIKKNS-TLGFTA 675
Query: 545 DYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDR 604
D YN +K V ELK+ FRPEFLNR+DE+IVF L + + EI +M E+ R
Sbjct: 676 VQD-SGKDYNNMKDKVMNELKKSFRPEFLNRIDEIIVFHSLDEKHIAEIVSLMADELRKR 734
Query: 605 LKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVI 664
LK ++++ +T+ + + +EG++PSYGARPLRRAI + +ED ++E++L I +GDS+
Sbjct: 735 LKEQEVDFILTDNAKNFLAKEGFDPSYGARPLRRAIQKHIEDRLSEELLKGSISKGDSLT 794
Query: 665 VDVDSDGNVTVL 676
+D + DG + VL
Sbjct: 795 ID-EKDGELVVL 805
>gi|261417579|ref|YP_003251261.1| ATPase AAA [Geobacillus sp. Y412MC61]
gi|319765237|ref|YP_004130738.1| ATPase AAA [Geobacillus sp. Y412MC52]
gi|261374036|gb|ACX76779.1| ATPase AAA-2 domain protein [Geobacillus sp. Y412MC61]
gi|317110103|gb|ADU92595.1| ATPase AAA-2 domain protein [Geobacillus sp. Y412MC52]
Length = 810
Score = 822 bits (2123), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/667 (60%), Positives = 528/667 (79%), Gaps = 10/667 (1%)
Query: 11 AGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIG 70
+G GGG+S PTL+ +LT +A EG+LDPV+GR +I+RV+++L RRTKNNP LIG
Sbjct: 149 SGHGGGASHVSTPTLDSLARDLTAIAREGRLDPVIGRSKEIQRVIEVLSRRTKNNPVLIG 208
Query: 71 EPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEI 130
EPGVGKTAIAEGLAQ+I + +VP+T+ K+V+TLDMG +VAGTKYRGEFE+RLKK+M+EI
Sbjct: 209 EPGVGKTAIAEGLAQQIVNNEVPETLRDKRVMTLDMGTVVAGTKYRGEFEDRLKKVMDEI 268
Query: 131 KQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDP 190
+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKP+LARGELQCIGATTLDEYRK+IEKD
Sbjct: 269 RQAGNIILFIDELHTLIGAGGAEGAIDASNILKPALARGELQCIGATTLDEYRKYIEKDA 328
Query: 191 ALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLP 250
ALERRFQP+ V EP+V+E+IQILKGLR+RYE HH++ +DEA+ A +LS +YI+DRFLP
Sbjct: 329 ALERRFQPIYVDEPTVEESIQILKGLRDRYEAHHRVSISDEAIEQAVKLSDRYITDRFLP 388
Query: 251 DKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMD 310
DKAIDLIDEA S+VRLR P + +ELE++L ++ KEK+ AV+ Q+FEKA LRD E
Sbjct: 389 DKAIDLIDEACSKVRLRSFTAPPKLKELEQKLEEVRKEKDAAVQSQEFEKAASLRDMEQR 448
Query: 311 LKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKM 370
L+ ++ KE + G VT DI +VS+WTGIPV K++ E++RLLK+
Sbjct: 449 LREELEETKRAWKE------KQGQENLEVTVEDIAAVVSSWTGIPVSKLAETETERLLKL 502
Query: 371 EETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYY 430
EE LH RV+GQDEAVKA+++A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+ALA
Sbjct: 503 EEILHSRVVGQDEAVKAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAEAM 562
Query: 431 FGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKA 490
FG E+A+IR+DMSE+ME+H+ S+LIGSPPGYVGY EGGQLTE VRR+PY+VVL DE+EKA
Sbjct: 563 FGDEDALIRIDMSEYMEKHSTSRLIGSPPGYVGYEEGGQLTEKVRRKPYSVVLLDEMEKA 622
Query: 491 HPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKD 550
HPDVFN++LQ+LEDGRLTDSKGRTVDF+NT++IMTSNVG+ +++ + +GF++ + +
Sbjct: 623 HPDVFNILLQVLEDGRLTDSKGRTVDFRNTIIIMTSNVGADALKR-NKYVGFNI--QDGN 679
Query: 551 SSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDI 610
Y +KS V +ELK+ FRPEFLNR+DE+IVF L K +K+I +M + RLK +DI
Sbjct: 680 QQYKDMKSKVMDELKKAFRPEFLNRIDEIIVFHSLEKDHLKQIVRLMADTLVKRLKEQDI 739
Query: 611 ELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSD 670
+L++TE E++ EG++P YGARPLRRA+ + +ED ++E++L I +G V+VDV D
Sbjct: 740 DLELTEAAIEKIAAEGFDPEYGARPLRRALQKHVEDRLSEELLKGTIAKGQKVVVDV-KD 798
Query: 671 GNVTVLN 677
G VL+
Sbjct: 799 GEFVVLS 805
>gi|169830395|ref|YP_001716377.1| ATPase [Candidatus Desulforudis audaxviator MP104C]
gi|169637239|gb|ACA58745.1| ATPase AAA-2 domain protein [Candidatus Desulforudis audaxviator
MP104C]
Length = 812
Score = 822 bits (2123), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/653 (60%), Positives = 532/653 (81%), Gaps = 9/653 (1%)
Query: 23 PTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEG 82
P L++Y +LT L+ +GKLDPV+GR +IERV+QIL RRTKNNP LIG+PGVGKTAIAEG
Sbjct: 165 PNLDQYARDLTALSRDGKLDPVIGRNREIERVIQILSRRTKNNPVLIGDPGVGKTAIAEG 224
Query: 83 LAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDE 142
LAQRI+ G+VP+ + GK+VI LD+ LVAGTKYRGEFEERLKK++EEI+ + I+LFIDE
Sbjct: 225 LAQRISDGNVPEVLTGKRVIALDLASLVAGTKYRGEFEERLKKVLEEIRTAGNIVLFIDE 284
Query: 143 VHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVP 202
+HTL+GAGAAEGAIDAANILKP+LARGELQ IGATTLDEYRKH+E+DPALERRFQP+ V
Sbjct: 285 LHTLVGAGAAEGAIDAANILKPALARGELQTIGATTLDEYRKHVERDPALERRFQPIMVE 344
Query: 203 EPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGS 262
EP+V+ETI IL+GLR+RYE HH++R TD+AL SAA+LS +YI+DRFLPDKAIDLIDEAGS
Sbjct: 345 EPTVEETIAILRGLRDRYEAHHRVRITDDALESAARLSDRYIADRFLPDKAIDLIDEAGS 404
Query: 263 RVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKG 322
RVRL+ +P E +ELE+ + ++ KEK AV Q+FEKA +LRD+E ++A++ + ++
Sbjct: 405 RVRLQAFTMPPELKELEQRVEELRKEKEAAVAAQEFEKAAQLRDQEQKMRAELQSSLEDW 464
Query: 323 KEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQD 382
++ + G VV E DI HI+S+WTGIPV+K++ +E+++LL+ME+ LH+RV+GQD
Sbjct: 465 RQ------QKGGDELVVDEQDIAHIISSWTGIPVKKLAEEETEKLLRMEDLLHERVVGQD 518
Query: 383 EAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDM 442
EAV+A+SRAIRRAR GLK+P RPI SFIF GPTGVGK+ELA+AL FG E+A++R+DM
Sbjct: 519 EAVRAVSRAIRRARAGLKDPRRPIGSFIFLGPTGVGKTELARALGEALFGDEDALVRIDM 578
Query: 443 SEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQIL 502
SE+ ERHTVS+L+G+PPGYVGY EGGQLTEAVRRRPYTVVL DEIEKAHP+VFN++LQ+L
Sbjct: 579 SEYQERHTVSRLVGAPPGYVGYDEGGQLTEAVRRRPYTVVLLDEIEKAHPEVFNILLQVL 638
Query: 503 EDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTE 562
EDGRLTD++GRTVDF+NT++I+TSNVG ++I+K ++GF + +++ ++Y R+K V
Sbjct: 639 EDGRLTDARGRTVDFRNTVIILTSNVGVNLIQKET-KMGF-VTVEDQAATYERMKEKVIG 696
Query: 563 ELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERV 622
EL + FRPEFLNRLDE+IVF LT +++I ++ML++V RL+ +++++ ++ ++ +
Sbjct: 697 ELHRTFRPEFLNRLDEIIVFHALTGAHIRQIVELMLQDVARRLEENEVQVEFSDEVKDLL 756
Query: 623 VEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTV 675
EG++ +GARPLRR I R +ED ++E+++ K GD +++D D +TV
Sbjct: 757 AREGFDEKFGARPLRRTIQRRIEDKLSEELIRGAFKRGDRLLLDA-RDEEITV 808
>gi|427416269|ref|ZP_18906452.1| ATPase with chaperone activity, ATP-binding subunit [Leptolyngbya
sp. PCC 7375]
gi|425758982|gb|EKU99834.1| ATPase with chaperone activity, ATP-binding subunit [Leptolyngbya
sp. PCC 7375]
Length = 817
Score = 822 bits (2122), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/657 (61%), Positives = 524/657 (79%), Gaps = 9/657 (1%)
Query: 21 KMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIA 80
K P L G NLT+LA G+LDPV+GR +IER++QIL RRTKNNP LIGEPGVGKTA+A
Sbjct: 158 KTPILNRCGVNLTELATLGRLDPVIGRHEEIERMIQILSRRTKNNPILIGEPGVGKTALA 217
Query: 81 EGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFI 140
EGLAQRI D+P++ ++V+TL++G L+AGTKYRGEFEERLK +M E++ + +IL I
Sbjct: 218 EGLAQRIIDRDLPESFHNRQVMTLNVGSLLAGTKYRGEFEERLKTIMVELRSAGNVILVI 277
Query: 141 DEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVK 200
DEVHTLIGAG+ EG++DAANILKP+LARGELQCIGATTLDEYR+H E+D AL RRFQPV
Sbjct: 278 DEVHTLIGAGSPEGSLDAANILKPALARGELQCIGATTLDEYRQHFERDAALARRFQPVM 337
Query: 201 VPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEA 260
+ EPS+DE + IL+GLR YE HH L +D AL +A + S +YISDRFLPDKAIDLIDEA
Sbjct: 338 IGEPSIDEAVLILQGLRSCYERHHHLTISDLALEAAVKFSNRYISDRFLPDKAIDLIDEA 397
Query: 261 GSRVRLRHA-QLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALV 319
GSRV + A Q +++L K L+QI+K+K++A++ Q+F +A L+ +E++L +I +V
Sbjct: 398 GSRVHILSAKQQSFTSKDLSKALQQISKKKDDAIQKQEFAQASALQGQEIELMKKIDPVV 457
Query: 320 DKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVI 379
+E DI ++VS+WTGIPV K++ ESD+LL MEE LH+R+I
Sbjct: 458 QDASVSRSGSVV--------SEADIAYVVSSWTGIPVSKLTESESDQLLHMEEILHRRLI 509
Query: 380 GQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIR 439
GQ EAVKAI+RA RRAR GL+NPNRPIASFIF+GPTGVGK+EL KALA +FG+E AM+R
Sbjct: 510 GQTEAVKAIARATRRARAGLQNPNRPIASFIFAGPTGVGKTELVKALAISFFGAEAAMVR 569
Query: 440 LDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMML 499
LDMSE+MERHT++KLIGSPPGYVG+ EGG+LTEAVRR+PYTV+L DEIEKAHPDV N++L
Sbjct: 570 LDMSEYMERHTIAKLIGSPPGYVGHGEGGKLTEAVRRKPYTVILLDEIEKAHPDVSNLLL 629
Query: 500 QILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSL 559
QIL++G LTD+KGRTV+FKNTLL+MTSNVG+ +I+KG +GF++ ++ DS Y + +L
Sbjct: 630 QILDEGHLTDAKGRTVNFKNTLLVMTSNVGAKLIQKGVGGLGFNVADNQTDSHYRNLVTL 689
Query: 560 VTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFR 619
V EELK++FRPEFLNRLDE+IVFRQLTK EVK+IADI+L + RL + I L VT+RF+
Sbjct: 690 VNEELKEFFRPEFLNRLDEVIVFRQLTKDEVKQIADILLCDFQRRLTEQMITLTVTDRFK 749
Query: 620 ERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTVL 676
+ ++E GY+P GARPLRRAI RLLEDS+AE +L+R+++ GD+VI+D+D + +V +L
Sbjct: 750 DYLIESGYSPEQGARPLRRAITRLLEDSLAEAILSRQVQAGDAVIIDIDDNNDVQIL 806
>gi|336112769|ref|YP_004567536.1| ATPase AAA-2 domain-containing protein [Bacillus coagulans 2-6]
gi|335366199|gb|AEH52150.1| ATPase AAA-2 domain protein [Bacillus coagulans 2-6]
Length = 816
Score = 822 bits (2122), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/665 (61%), Positives = 525/665 (78%), Gaps = 10/665 (1%)
Query: 11 AGVGGGSSGN-KMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLI 69
A V GGS+ + PTL+ +LT +A E LDPV+GR +I+RV+++L RRTKNNP LI
Sbjct: 147 ASVQGGSAASVSTPTLDSLARDLTAIAREDSLDPVIGRSKEIQRVIEVLSRRTKNNPVLI 206
Query: 70 GEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEE 129
GEPGVGKTAIAEGLAQ+I +VP+T+ K+V+TLDMG +VAGTKYRGEFE+RLKK+M+E
Sbjct: 207 GEPGVGKTAIAEGLAQQIVHNEVPETLRDKRVMTLDMGTVVAGTKYRGEFEDRLKKVMDE 266
Query: 130 IKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKD 189
I+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTLDEYRK+IEKD
Sbjct: 267 IRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEYRKYIEKD 326
Query: 190 PALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFL 249
ALERRFQP++V EP++DE+IQILKGLR+RYE HH++ TDEA+ +A +LS +YI+DRFL
Sbjct: 327 AALERRFQPIQVDEPTIDESIQILKGLRDRYEAHHRVSITDEAIEAAVKLSDRYIADRFL 386
Query: 250 PDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREM 309
PDKAIDLIDEAGS+VRLR P +ELE +L ++ KEK+ AV+ Q+FEKA LRD E
Sbjct: 387 PDKAIDLIDEAGSKVRLRSFTTPPNLKELELKLEEVRKEKDAAVQSQEFEKAAALRDTEQ 446
Query: 310 DLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLK 369
L+ Q+ ++ K+ KA+ G VT DI +VS+WTG+PV K++ E++RLL
Sbjct: 447 KLREQL----EETKKSWKAKQ--GRENSEVTVDDIALVVSSWTGVPVTKLAQTETERLLH 500
Query: 370 MEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAY 429
+EE LH RVIGQ+EAV A+++A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+ALA
Sbjct: 501 LEEILHSRVIGQEEAVLAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAEA 560
Query: 430 YFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEK 489
FG E+AMIR+DMSE+ME+H+ S+L+GSPPGYVG+ EGGQLTE VRR+PY+VVL DEIEK
Sbjct: 561 MFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGFEEGGQLTEKVRRKPYSVVLLDEIEK 620
Query: 490 AHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEK 549
AHPDVFN++LQ+L+DGRLTDSKGRTVDF NT++IMTSNVG+ +++ + +GF + D
Sbjct: 621 AHPDVFNILLQVLDDGRLTDSKGRTVDFSNTIVIMTSNVGADALKR-NKSVGFTIQ-DTV 678
Query: 550 DSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKD 609
++ Y +K V EELK+ FRPEFLNR+DE IVF L K + EI +M KE+ DRLK
Sbjct: 679 EADYKDMKDKVLEELKKAFRPEFLNRVDETIVFHSLEKKHLNEIVTLMAKELSDRLKEHH 738
Query: 610 IELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDS 669
IEL +T+ +E+V E+GY+P YGARPLRR+I + +ED ++E+ML IKEG V+VDV
Sbjct: 739 IELVLTDAAKEKVAEKGYDPEYGARPLRRSIQKNIEDRLSEEMLKGNIKEGQKVLVDV-K 797
Query: 670 DGNVT 674
DG T
Sbjct: 798 DGEFT 802
>gi|410454418|ref|ZP_11308357.1| Class III stress response-related ATPase, ClpC [Bacillus
bataviensis LMG 21833]
gi|409932233|gb|EKN69200.1| Class III stress response-related ATPase, ClpC [Bacillus
bataviensis LMG 21833]
Length = 813
Score = 821 bits (2120), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/658 (60%), Positives = 517/658 (78%), Gaps = 9/658 (1%)
Query: 10 GAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLI 69
G GG S+ PTL+ +LT +A EG LDPV+GR +I+RV+++L RRTKNNP LI
Sbjct: 148 GGHQGGASASANTPTLDGLARDLTSIAREGSLDPVIGRSKEIQRVIEVLSRRTKNNPVLI 207
Query: 70 GEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEE 129
GEPGVGKTAIAEGLAQ+I + +VP+ + K+V+TLDMG +VAGTKYRGEFE+RLKK+M+E
Sbjct: 208 GEPGVGKTAIAEGLAQQIVNNEVPEILRDKRVMTLDMGTVVAGTKYRGEFEDRLKKVMDE 267
Query: 130 IKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKD 189
I+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTLDEYRK+IEKD
Sbjct: 268 IRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEYRKYIEKD 327
Query: 190 PALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFL 249
ALERRFQP++V EP+ +E+IQIL+GLR+RYE HH++ TDEA+ +A +LS +YISDRFL
Sbjct: 328 AALERRFQPIRVDEPTAEESIQILEGLRDRYEAHHRVSITDEAIQAAVKLSDRYISDRFL 387
Query: 250 PDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREM 309
PDKAIDLIDEAGS+VRLR P +ELE +L ++ KEK+ AV+ Q+FEKA LRD E
Sbjct: 388 PDKAIDLIDEAGSKVRLRSYTTPPNLKELEVKLDEVRKEKDSAVQSQEFEKAASLRDTEQ 447
Query: 310 DLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLK 369
L+ Q+ KE E VT DI +VS+WTG+PV K++ E+ +LL
Sbjct: 448 RLREQLEETKKTWKEKQGKENNE------VTVEDIASVVSSWTGVPVSKLAETETAKLLN 501
Query: 370 MEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAY 429
+EE LH R+IGQ+EAV A+S+A+RRAR GLK+P RPI SF+F GPTGVGK+ELA+ALA
Sbjct: 502 LEEILHSRIIGQEEAVIAVSKAVRRARAGLKDPKRPIGSFVFLGPTGVGKTELARALAEA 561
Query: 430 YFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEK 489
FG E+AMIR+DMSE+ME+H+ S+L+GSPPGYVGY EGGQLTE VRR+PY+V+L DEIEK
Sbjct: 562 MFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPYSVILLDEIEK 621
Query: 490 AHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEK 549
AHPDVFN++LQ+LEDGRLTDSKGRTVDF+NT+LIMTSNVG+ +++ + +GF++ ++
Sbjct: 622 AHPDVFNILLQVLEDGRLTDSKGRTVDFRNTVLIMTSNVGAEQLKR-NKYVGFNIQDGQQ 680
Query: 550 DSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKD 609
D Y +K V EELK+ FRPEFLNR+DE+IVF L + + EI ++ +++ RLK +D
Sbjct: 681 D--YKDMKGKVMEELKKAFRPEFLNRIDEIIVFHALERKHLNEIVTLLSEQLIKRLKEQD 738
Query: 610 IELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDV 667
I L++T+ +E++ +EGY+P YGARPLRRAI + +ED ++E++L + G +VI+DV
Sbjct: 739 ISLELTDAAKEKISQEGYDPEYGARPLRRAIQKHIEDRLSEELLKGTLLTGQNVIIDV 796
>gi|406666957|ref|ZP_11074720.1| Negative regulator of genetic competence ClpC/MecB [Bacillus
isronensis B3W22]
gi|405385240|gb|EKB44676.1| Negative regulator of genetic competence ClpC/MecB [Bacillus
isronensis B3W22]
Length = 814
Score = 820 bits (2119), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/648 (62%), Positives = 510/648 (78%), Gaps = 9/648 (1%)
Query: 23 PTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEG 82
PTL+ +LT +A EG LDPV+GR +I RVV++L RRTKNNP LIGEPGVGKTAIAEG
Sbjct: 163 PTLDSLARDLTAVAREGSLDPVIGRSKEITRVVEVLSRRTKNNPVLIGEPGVGKTAIAEG 222
Query: 83 LAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDE 142
LAQ+I + +VP+T+ K+V+TLDMG +VAGTKYRGEFE+RLKK+M+EI+Q+ IILFIDE
Sbjct: 223 LAQQIINNEVPETLRDKRVMTLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDE 282
Query: 143 VHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVP 202
+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTLDEYRK+IEKD ALERRFQP++V
Sbjct: 283 LHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEYRKYIEKDAALERRFQPIQVD 342
Query: 203 EPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGS 262
EPSV+ETIQI+ GLR+RYE HH+++ +DEA+ +AA+LS +YISDRFLPDKAIDLIDEAGS
Sbjct: 343 EPSVEETIQIINGLRDRYEAHHRVKISDEAVEAAAKLSDRYISDRFLPDKAIDLIDEAGS 402
Query: 263 RVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKG 322
+VRLR +P +ELE +L I EKN AV GQ+FEKA LRD E LK ++ L +
Sbjct: 403 KVRLRSYTVPPNLKELEDKLEGIKSEKNAAVSGQEFEKAAALRDTEQKLKQELEQLKKEW 462
Query: 323 KEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQD 382
KE + G V DI +V+ WTGIPV K++ ES +LL +EE LHKRV+GQ
Sbjct: 463 KE------KQGKEESTVYVDDIAQVVAMWTGIPVSKIAQAESAKLLNLEEELHKRVVGQG 516
Query: 383 EAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDM 442
EAV+AISRAIRRAR GLK+P RPI SFIF GPTGVGK+ELA+ALA FG E+AMIR+DM
Sbjct: 517 EAVEAISRAIRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAEVMFGDEDAMIRVDM 576
Query: 443 SEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQIL 502
SE+ME+H+ S+L+GSPPGYVG+ +GGQLTE VRR+PY+VVL DEIEKAHPDVFN++LQ+L
Sbjct: 577 SEYMEKHSTSRLVGSPPGYVGFDDGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVL 636
Query: 503 EDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTE 562
EDGRLTDSKGR VDF+NT++IMTSNVG+ + K + +GF + S +KS + E
Sbjct: 637 EDGRLTDSKGRVVDFRNTVVIMTSNVGADAL-KYRKHVGFGAGLNA--SKDKDMKSTMLE 693
Query: 563 ELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERV 622
ELK+ FRPEFLNR+DEMIVF L K +KEI +M + RLK +DIELQ+T+ E++
Sbjct: 694 ELKKAFRPEFLNRIDEMIVFHSLEKDHLKEIVSLMANSLKKRLKEQDIELQLTDAALEKI 753
Query: 623 VEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSD 670
EEGY+P YGARPLRRA+ + +ED ++E++L + + +V++D +D
Sbjct: 754 SEEGYDPQYGARPLRRALQKHVEDRLSEELLKGTLDKTQTVVLDYVND 801
>gi|393198912|ref|YP_006460754.1| chaperone ATPase [Solibacillus silvestris StLB046]
gi|327438243|dbj|BAK14608.1| ATPase with chaperone activity, ATP-binding subunit [Solibacillus
silvestris StLB046]
Length = 814
Score = 820 bits (2118), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/648 (62%), Positives = 510/648 (78%), Gaps = 9/648 (1%)
Query: 23 PTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEG 82
PTL+ +LT +A EG LDPV+GR +I RVV++L RRTKNNP LIGEPGVGKTAIAEG
Sbjct: 163 PTLDSLARDLTAVAREGSLDPVIGRSKEITRVVEVLSRRTKNNPVLIGEPGVGKTAIAEG 222
Query: 83 LAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDE 142
LAQ+I + +VP+T+ K+V+TLDMG +VAGTKYRGEFE+RLKK+M+EI+Q+ IILFIDE
Sbjct: 223 LAQQIINNEVPETLRDKRVMTLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDE 282
Query: 143 VHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVP 202
+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTLDEYRK+IEKD ALERRFQP++V
Sbjct: 283 LHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEYRKYIEKDAALERRFQPIQVD 342
Query: 203 EPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGS 262
EPSV+ETIQI+ GLR+RYE HH+++ +DEA+ +AA+LS +YISDRFLPDKAIDLIDEAGS
Sbjct: 343 EPSVEETIQIINGLRDRYEAHHRVKISDEAVEAAAKLSDRYISDRFLPDKAIDLIDEAGS 402
Query: 263 RVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKG 322
+VRLR +P +ELE +L I EKN AV GQ+FEKA LRD E LK ++ L +
Sbjct: 403 KVRLRSYTVPPNLKELEDKLEGIKSEKNAAVSGQEFEKAAALRDTEQKLKQELEQLKKEW 462
Query: 323 KEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQD 382
KE + G V DI +V+ WTGIPV K++ ES +LL +EE LHKRV+GQ
Sbjct: 463 KE------KQGKEESTVYVDDIAQVVAMWTGIPVSKIAQAESAKLLNLEEELHKRVVGQG 516
Query: 383 EAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDM 442
EAV+AISRAIRRAR GLK+P RPI SFIF GPTGVGK+ELA+ALA FG E+AMIR+DM
Sbjct: 517 EAVEAISRAIRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAEVMFGDEDAMIRVDM 576
Query: 443 SEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQIL 502
SE+ME+H+ S+L+GSPPGYVG+ +GGQLTE VRR+PY+VVL DEIEKAHPDVFN++LQ+L
Sbjct: 577 SEYMEKHSTSRLVGSPPGYVGFDDGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVL 636
Query: 503 EDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTE 562
EDGRLTDSKGR VDF+NT++IMTSNVG+ + K + +GF + S +KS + E
Sbjct: 637 EDGRLTDSKGRVVDFRNTVVIMTSNVGADAL-KYRKHVGFGAGLNA--SKDKDMKSTMLE 693
Query: 563 ELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERV 622
ELK+ FRPEFLNR+DEMIVF L K +KEI +M + RLK +DIELQ+T+ E++
Sbjct: 694 ELKKAFRPEFLNRIDEMIVFHSLEKDHLKEIVSLMANSLKKRLKEQDIELQLTDAALEKI 753
Query: 623 VEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSD 670
EEGY+P YGARPLRRA+ + +ED ++E++L + + +V++D +D
Sbjct: 754 SEEGYDPQYGARPLRRALQKHVEDRLSEELLKGTLDKTQTVVLDYVND 801
>gi|373859602|ref|ZP_09602328.1| ATPase AAA-2 domain protein [Bacillus sp. 1NLA3E]
gi|372450597|gb|EHP24082.1| ATPase AAA-2 domain protein [Bacillus sp. 1NLA3E]
Length = 813
Score = 820 bits (2117), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/656 (60%), Positives = 517/656 (78%), Gaps = 9/656 (1%)
Query: 14 GGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPG 73
GGG++ PTL+ +LT +A EG LDPV+GR +I+RV+++L RRTKNNP LIGEPG
Sbjct: 151 GGGTANANTPTLDSLARDLTAIAREGSLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPG 210
Query: 74 VGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQS 133
VGKTAIAEGLAQ+I + +VP+ + K+V+TLDMG +VAGTKYRGEFE+RLKK+M+EI+Q+
Sbjct: 211 VGKTAIAEGLAQQIVNNEVPEILRDKRVMTLDMGTVVAGTKYRGEFEDRLKKVMDEIRQA 270
Query: 134 DEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALE 193
IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTLDEYRK+IEKD ALE
Sbjct: 271 GNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEYRKYIEKDAALE 330
Query: 194 RRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKA 253
RRFQP++V EP+ DE+I ILKGLR+RYE HH++ TDEA+ +A LS +YI DRFLPDKA
Sbjct: 331 RRFQPIRVDEPTADESILILKGLRDRYEAHHRVSITDEAIEAAVSLSDRYIPDRFLPDKA 390
Query: 254 IDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKA 313
IDLIDEAGS+VRLR P +ELE +L + KEK+ AV+ Q+FEKA LRD E L+
Sbjct: 391 IDLIDEAGSKVRLRSYTTPPNLKELEVKLEVVRKEKDAAVQSQEFEKAASLRDSEQRLRE 450
Query: 314 QISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEET 373
Q+ KE E VT DI +V+ WTGIPV K++ E+D+LLK+EE
Sbjct: 451 QLEETKKTWKEKQGQENSE------VTVEDIATVVANWTGIPVSKLAQTETDKLLKLEEI 504
Query: 374 LHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGS 433
+H RVIGQ+EAV A+S+A+RRAR GLK+P RPI SF+F GPTGVGK+ELA+ALA FG
Sbjct: 505 IHSRVIGQEEAVVAVSKAVRRARAGLKDPKRPIGSFVFLGPTGVGKTELARALAEAMFGD 564
Query: 434 EEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPD 493
E+AMIR+DMSE+ME+H+ S+L+GSPPGYVGY EGGQLTE VRR+PY+V+L DEIEKAHPD
Sbjct: 565 EDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPYSVILLDEIEKAHPD 624
Query: 494 VFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSY 553
VFN++LQ+LEDGRLTDSKGRTVDF+NT+LIMTSNVG+ +++ + +GF++ +D Y
Sbjct: 625 VFNILLQVLEDGRLTDSKGRTVDFRNTVLIMTSNVGAEALKR-NKYVGFNIQDGAQD--Y 681
Query: 554 NRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQ 613
+K V EELK+ FRPEFLNR+DE+IVF L + ++K+I ++ +++ RLK + I+L+
Sbjct: 682 KDMKGKVMEELKKAFRPEFLNRIDEIIVFHALERAQLKQIVTLLSEQLIKRLKDQHIQLE 741
Query: 614 VTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDS 669
+T+ ++++ +EGY+P YGARPLRRAI + +ED ++E++L + G ++++DVD+
Sbjct: 742 LTDAAKDKISDEGYDPEYGARPLRRAIQKHIEDRLSEELLKGTVLTGHNIMIDVDN 797
>gi|381208304|ref|ZP_09915375.1| ATP-dependent Clp protease [Lentibacillus sp. Grbi]
Length = 810
Score = 819 bits (2116), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 394/660 (59%), Positives = 525/660 (79%), Gaps = 8/660 (1%)
Query: 17 SSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGK 76
SS PTL+ +LT+ A+EG +DPV+GR +IERV+Q+L RRTKNNP LIGEPGVGK
Sbjct: 158 SSNANTPTLDSLARDLTESAKEGNVDPVIGRSQEIERVIQVLSRRTKNNPVLIGEPGVGK 217
Query: 77 TAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEI 136
TA+AEGLAQ+I + ++P+ + K+V+TLDMG +VAGTKYRGEFE+RLKK+MEEI+Q++ I
Sbjct: 218 TAVAEGLAQQIVNNEIPEILRDKRVMTLDMGTVVAGTKYRGEFEDRLKKVMEEIRQANNI 277
Query: 137 ILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRF 196
ILFIDE+HTLIGAG AEGAIDA+NILKP+L+RGELQCIGATTLDEYRK+IEKD ALERRF
Sbjct: 278 ILFIDELHTLIGAGGAEGAIDASNILKPALSRGELQCIGATTLDEYRKYIEKDAALERRF 337
Query: 197 QPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDL 256
QP++V EP++DET+QILKGLR+RYE HH++ DE++ +AA LS +YI+DRFLPDKAIDL
Sbjct: 338 QPIQVDEPTLDETVQILKGLRDRYEAHHRVTIPDESIEAAANLSDRYITDRFLPDKAIDL 397
Query: 257 IDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQIS 316
IDEAGS+VRL +P + +ELE++L + KEK+ AV+ Q+FEKA LRD E L+ ++
Sbjct: 398 IDEAGSKVRLSSYTVPPDLKELEQKLDDVRKEKDSAVQSQEFEKAASLRDSEQRLREELE 457
Query: 317 ALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHK 376
+K KE + G VT DI +VS WTG+PV +++ DES+RLL +EETLH
Sbjct: 458 ETKNKWKE------KQGQKDSEVTVEDIAKVVSIWTGVPVSRLTKDESERLLNLEETLHN 511
Query: 377 RVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEA 436
RVIGQ+EAV+A+++AIRRAR GLK+P RPI SFIF GPTGVGK+ELA+ALA F EEA
Sbjct: 512 RVIGQEEAVEAVAKAIRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFADEEA 571
Query: 437 MIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFN 496
MIR+DMSE+ME+H S+L+GSPPGYVGY EGGQLTE VR +PY+VVL DE+EKAHP+VFN
Sbjct: 572 MIRIDMSEYMEKHATSRLVGSPPGYVGYDEGGQLTEKVRTKPYSVVLLDEVEKAHPEVFN 631
Query: 497 MMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRI 556
++LQ+LEDGRLTDSKGR VDF+NT+LIMTSNVG++ +++ + +GF LD D+++ Y +
Sbjct: 632 ILLQVLEDGRLTDSKGRVVDFRNTVLIMTSNVGANELKR-NKYVGFALD-DDQEQDYQNM 689
Query: 557 KSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTE 616
K+ VT+ELK+ FRPEFLNR+DE IVF L + +K I ++M+K++ RL +DIE +T+
Sbjct: 690 KTKVTDELKKAFRPEFLNRIDETIVFHSLERKHMKYIVNLMIKQLQSRLIQQDIEFTLTD 749
Query: 617 RFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTVL 676
+ E++ EG++P YGARPLRR+I + +ED ++E++L ++G+ V + +++ G +L
Sbjct: 750 KAVEKIANEGFDPEYGARPLRRSIQKNIEDMLSEELLKENFQKGEKVKIGLNNKGEFIIL 809
>gi|258513609|ref|YP_003189831.1| ATPase AAA-2 domain-containing protein [Desulfotomaculum
acetoxidans DSM 771]
gi|257777314|gb|ACV61208.1| ATPase AAA-2 domain protein [Desulfotomaculum acetoxidans DSM 771]
Length = 810
Score = 819 bits (2115), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/674 (59%), Positives = 533/674 (79%), Gaps = 24/674 (3%)
Query: 9 VGAGVGGGSSGN-KMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPC 67
+G G +GN + L+EYG +LT++A E KLDPVVGR+ +IERV+Q+L RRTKNNP
Sbjct: 151 CASGQCGSKAGNVQTKALDEYGRDLTEMAREDKLDPVVGREKEIERVIQVLSRRTKNNPV 210
Query: 68 LIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLM 127
L+G+PGVGKTA+ EGLAQRI+SG+VP+T+ K+V++LD+ LVAGTKYRGEFE+RLKK+
Sbjct: 211 LLGDPGVGKTAVVEGLAQRISSGNVPETLLSKRVVSLDLAALVAGTKYRGEFEDRLKKVT 270
Query: 128 EEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIE 187
+EI ++ I+LFIDE+HTLIGAGAAEGAIDAANILKP+LARGE+QCIGATTLDEYRK+IE
Sbjct: 271 QEITKAGNIVLFIDELHTLIGAGAAEGAIDAANILKPALARGEMQCIGATTLDEYRKYIE 330
Query: 188 KDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDR 247
KD ALERRFQP+ V E +V+ETI ILKGLR+RYE HH++R +DEALV+AA+L+ +YISDR
Sbjct: 331 KDAALERRFQPINVEEATVEETIAILKGLRDRYEAHHRVRISDEALVNAAKLADRYISDR 390
Query: 248 FLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDR 307
FLPDKAIDL+DEA SRVR+ P + ++LE++ ++ KEK EA+ Q+FEKA LRD+
Sbjct: 391 FLPDKAIDLMDEASSRVRMLAFTAPPDLKDLERKTEKVRKEKEEAINSQEFEKAARLRDQ 450
Query: 308 EMDLKAQIS------ALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVST 361
E LK ++ L G E++ V+E DI H+V++WTGIPV+K++
Sbjct: 451 EQSLKKELEDRREAWNLTKGGNELA------------VSEEDIAHVVASWTGIPVKKLAE 498
Query: 362 DESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSE 421
+ESDRLLKMEE LH+RVIGQ+EAV+A+SRA+RRAR GLK+P RP+ SFIF GPTGVGK+E
Sbjct: 499 EESDRLLKMEEILHQRVIGQEEAVRAVSRAVRRARAGLKDPGRPVGSFIFLGPTGVGKTE 558
Query: 422 LAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTV 481
LA+ALA FG ++A+IR+DMSE+ME++ VS+L+G+PPGYVGY EGGQLT+AVRR+PY+V
Sbjct: 559 LARALAEALFGDDDALIRIDMSEYMEKYAVSRLVGAPPGYVGYEEGGQLTKAVRRKPYSV 618
Query: 482 VLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIG 541
VL DEIEKAHPDVFN++LQ+LEDGRLTDS+GR VDF+NT++IMTSNVG S I K G +G
Sbjct: 619 VLLDEIEKAHPDVFNILLQVLEDGRLTDSQGRAVDFRNTVIIMTSNVGVSHIRKIG-SLG 677
Query: 542 FDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEV 601
F ++ SY+++K VT+EL++ FRPEFLNR+DE IVF L + + EI +MLK+V
Sbjct: 678 FQ---TAENDSYSKMKGDVTQELRKTFRPEFLNRVDETIVFHSLEQKHLNEIVGLMLKDV 734
Query: 602 FDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGD 661
RL +I+++ TE +E + +G++ +YGARPLRR I + +ED ++E++L +K+G+
Sbjct: 735 LGRLAENEIKVEATEAAKELLASKGFDETYGARPLRREIQKQVEDRLSEELLKGAVKKGE 794
Query: 662 SVIVDVDSDGNVTV 675
V+++V DG + +
Sbjct: 795 HVVLNV-VDGEILI 807
>gi|386712438|ref|YP_006178760.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Halobacillus
halophilus DSM 2266]
gi|384071993|emb|CCG43483.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Halobacillus
halophilus DSM 2266]
Length = 819
Score = 818 bits (2114), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/653 (60%), Positives = 517/653 (79%), Gaps = 9/653 (1%)
Query: 23 PTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEG 82
PTL+ +LT +A+EG +DPV+GR +IERV+Q+L RRTKNNP L+GEPGVGKTAIAEG
Sbjct: 168 PTLDSLARDLTTIAKEGNIDPVIGRGKEIERVIQVLSRRTKNNPVLVGEPGVGKTAIAEG 227
Query: 83 LAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDE 142
LAQ+I + ++P+ + K+V+TLDMG +VAGTKYRGEFE+RLKK+MEEI+Q+ IILFIDE
Sbjct: 228 LAQQIINNEIPEILRDKRVMTLDMGTVVAGTKYRGEFEDRLKKVMEEIRQAGNIILFIDE 287
Query: 143 VHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVP 202
+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATT+DEYRK+IEKD ALERRFQP++V
Sbjct: 288 LHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTIDEYRKYIEKDAALERRFQPIQVD 347
Query: 203 EPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGS 262
EP++DE++QIL+GLR+RYE HH++ D+++ SA + S +YI+DRFLPDKAIDLIDEA S
Sbjct: 348 EPTLDESVQILQGLRDRYEAHHRVTIPDDSIESAVRFSDRYITDRFLPDKAIDLIDEAAS 407
Query: 263 RVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKG 322
+VRLR P +ELE++L ++ KEK+ AV+ Q+FEKA LRD E L+ ++ D+
Sbjct: 408 KVRLRSYTAPPNLKELEQKLEEVRKEKDAAVQSQEFEKAASLRDSEQRLRDELEETKDEW 467
Query: 323 KEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQD 382
KE + G VT DI +VS WTG+PV K++ DES+RLL++E+TLH RVIGQD
Sbjct: 468 KE------KQGQEDSEVTVEDIASVVSTWTGVPVSKMTKDESERLLQLEDTLHNRVIGQD 521
Query: 383 EAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDM 442
EAVK+IS+AIRRAR GLK+P RPI SFIF GPTGVGK+ELA+ALA FG E+AMIR+DM
Sbjct: 522 EAVKSISKAIRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGEEDAMIRIDM 581
Query: 443 SEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQIL 502
SE+ME+H+ S+L+GSPPGYVGY EGGQLTE VR +PY+VVL DE+EKAHP+VFN++LQ+L
Sbjct: 582 SEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRNKPYSVVLLDEVEKAHPEVFNILLQVL 641
Query: 503 EDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTE 562
EDGRLTDSKGR VDF+NT+LIMTSNVG+ + K + +GF + D+ + SY +KS VT+
Sbjct: 642 EDGRLTDSKGRVVDFRNTVLIMTSNVGAQEL-KSNKYVGFSM--DDSNQSYKDMKSKVTD 698
Query: 563 ELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERV 622
ELK+ FRPEFLNR+DE IVF L + +K+I +M +E+ RL+ ++I ++++ E +
Sbjct: 699 ELKKAFRPEFLNRIDETIVFHSLERKHMKDIVTLMAEELRKRLQEQEINFTLSDKAIEHI 758
Query: 623 VEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTV 675
E G++P YGARPLRR+I + +ED ++E++L I +G SV +D++ + V
Sbjct: 759 AETGFDPEYGARPLRRSIQKNVEDLLSEELLKENIAKGQSVKIDLNDNNEFVV 811
>gi|225175258|ref|ZP_03729254.1| ATPase AAA-2 domain protein [Dethiobacter alkaliphilus AHT 1]
gi|225169434|gb|EEG78232.1| ATPase AAA-2 domain protein [Dethiobacter alkaliphilus AHT 1]
Length = 818
Score = 818 bits (2113), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/658 (60%), Positives = 522/658 (79%), Gaps = 9/658 (1%)
Query: 16 GSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVG 75
G + + PT++++G +LTKLA++ KLDPV+GR +IERV+Q+L RRTKNNPCLIGEPGVG
Sbjct: 157 GKAPSSTPTVDQFGRDLTKLAKDNKLDPVIGRDIEIERVIQVLSRRTKNNPCLIGEPGVG 216
Query: 76 KTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDE 135
KTAIAEGLAQRI G VP+ + K+V TL++ +VAGTKYRGEFEERL+KLMEE+ +
Sbjct: 217 KTAIAEGLAQRIIEGKVPENLRDKRVATLELAAVVAGTKYRGEFEERLRKLMEELHAAGN 276
Query: 136 IILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERR 195
+I+FIDE+HTLIGAGAAEGAIDA+NILKP+LARGELQ IGATTLDEYRKHIE+DPALERR
Sbjct: 277 VIVFIDELHTLIGAGAAEGAIDASNILKPALARGELQAIGATTLDEYRKHIERDPALERR 336
Query: 196 FQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAID 255
FQP+ V EPS +E+++ILKGLR+RYE HH+++ TDEAL SA QL+ +YI+DRFLPDKAID
Sbjct: 337 FQPITVGEPSKEESLEILKGLRDRYEAHHRVKITDEALNSAVQLADRYITDRFLPDKAID 396
Query: 256 LIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQI 315
LIDEA SRVR++ P + +E+E L + EK AVRGQ+FE A +LRD+E LK ++
Sbjct: 397 LIDEAASRVRMKAYTAPPDLKEMEGRLDTLRNEKESAVRGQEFEVAAQLRDKEQQLKEEL 456
Query: 316 SALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLH 375
+L + ++ +T++ VV+E DI IVSAWTGIPV++++ +E++RLL ME LH
Sbjct: 457 QSLKKEWEQRKSTDTQS-----VVSE-DIAQIVSAWTGIPVKRLAAEETERLLNMESILH 510
Query: 376 KRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEE 435
KRVIGQDEAVKAISRAIRRAR GLK+P RPI SFIF GPTGVGK+ELA+ALA FG E+
Sbjct: 511 KRVIGQDEAVKAISRAIRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESLFGDED 570
Query: 436 AMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVF 495
AMIRLDMSE+ME+HT ++L+GSPPGYVGY +GGQLTE VRR+PY+V+LFDEIEKAHP+VF
Sbjct: 571 AMIRLDMSEYMEKHTTARLVGSPPGYVGYDDGGQLTEKVRRKPYSVILFDEIEKAHPEVF 630
Query: 496 NMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNR 555
N++LQ+LEDGRLTD KGR VDF+NT++IMTSNVG+ ++K +GF +++ +Y
Sbjct: 631 NVLLQVLEDGRLTDGKGRAVDFRNTVIIMTSNVGAGELKKQA-TMGF--RAADREKTYED 687
Query: 556 IKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVT 615
+K V +ELK+ FRPEFLNR+DE+IVF L + + EI ++ML E+ RL +I L+V+
Sbjct: 688 MKGKVMDELKRTFRPEFLNRIDEVIVFHPLEEEHLTEIVELMLDELARRLGDYEIRLEVS 747
Query: 616 ERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNV 673
+ + +EGY+P+YGARPLRR + + +ED ++EKML + D++ V+V DG V
Sbjct: 748 PEAKAFLAKEGYDPTYGARPLRRVLQKRIEDEVSEKMLRGDFTHNDTIQVNVQDDGLV 805
>gi|297545353|ref|YP_003677655.1| ATPase [Thermoanaerobacter mathranii subsp. mathranii str. A3]
gi|296843128|gb|ADH61644.1| ATPase AAA-2 domain protein [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
Length = 816
Score = 818 bits (2113), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/665 (61%), Positives = 536/665 (80%), Gaps = 13/665 (1%)
Query: 14 GGGSSGNKM-----PTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCL 68
GG + K+ PTL ++G +LT+LA +GKLDPV+GR+ +IERV+QIL RRTKNNP L
Sbjct: 149 GGPAKATKVKNTNTPTLNQFGRDLTELARDGKLDPVIGREKEIERVIQILSRRTKNNPVL 208
Query: 69 IGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLME 128
IGEPGVGKTAI EGLAQ+I G++P+ ++ K+V+TLDM +VAGTKYRGEFE+RLK ++
Sbjct: 209 IGEPGVGKTAIVEGLAQKIVEGEIPEILKDKRVVTLDMASMVAGTKYRGEFEDRLKTVLN 268
Query: 129 EIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEK 188
E+ ++ +ILFIDE+HTLIGAGAAEGAIDA+NILKP+LARGE+Q +GATTL+EYRK++E+
Sbjct: 269 EVIKAGNVILFIDEMHTLIGAGAAEGAIDASNILKPALARGEIQVVGATTLEEYRKYVER 328
Query: 189 DPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRF 248
DPALERRFQP+ V EP+V+ETI+ILKGLR++YE HH+++ TDEAL +AA+LS++YI+DRF
Sbjct: 329 DPALERRFQPIIVDEPTVEETIEILKGLRDKYEAHHRVKITDEALEAAARLSHRYIADRF 388
Query: 249 LPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDRE 308
LPDKAIDLIDEA SRVRL+ P E +ELE ++ + KEK EA++ Q++EKA ++RD E
Sbjct: 389 LPDKAIDLIDEAASRVRLKTVTAPPEIKELEDKINDLIKEKEEAIKTQEYEKAAKIRDEE 448
Query: 309 MDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLL 368
L+ ++ L K K + + VGP +I +VS WTGIPV+K++ +ES+RLL
Sbjct: 449 QKLREELEKL--KAKWQQNSLSNEKSVGP----EEIAQVVSLWTGIPVKKLAEEESERLL 502
Query: 369 KMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAA 428
+EE LH+RVIGQDEAV+A++RAIRRARVGLK+P RPI SFIF GPTGVGK+EL KALA
Sbjct: 503 HLEEILHERVIGQDEAVEAVARAIRRARVGLKDPKRPIGSFIFLGPTGVGKTELTKALAE 562
Query: 429 YYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIE 488
FG E AMIRLDMSE+MERHTVSKLIGSPPGYVG+ EGGQLTE VRR+PY+V+L DEIE
Sbjct: 563 ALFGDENAMIRLDMSEYMERHTVSKLIGSPPGYVGFEEGGQLTEKVRRKPYSVILLDEIE 622
Query: 489 KAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDE 548
KAHPDVFN++LQILEDGRLTDSKGRTVDFKNT++IMTSNVG+ +++K +GF E
Sbjct: 623 KAHPDVFNILLQILEDGRLTDSKGRTVDFKNTVIIMTSNVGAELLKKQA-TLGFMPQEKE 681
Query: 549 KDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTK 608
+S+ ++K + EL++ FRPEFLNR+DE+IVF QLTK ++++IADIM+KE+ DRLK
Sbjct: 682 DKASHEKVKETLMAELRKTFRPEFLNRVDEIIVFHQLTKEDIEKIADIMMKELNDRLKEN 741
Query: 609 DIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVD 668
+I+L+ T +E ++++GY+P+YGARPLRR I R++E+ ++E ML ++K GD +IV
Sbjct: 742 NIKLEFTPEGKEEIIKQGYDPNYGARPLRRVIQRIVENQLSELMLQGKVKPGDELIVTA- 800
Query: 669 SDGNV 673
DG +
Sbjct: 801 KDGKI 805
>gi|153952834|ref|YP_001393599.1| protein ClpC [Clostridium kluyveri DSM 555]
gi|146345715|gb|EDK32251.1| ClpC [Clostridium kluyveri DSM 555]
Length = 812
Score = 817 bits (2110), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/662 (59%), Positives = 525/662 (79%), Gaps = 8/662 (1%)
Query: 7 EAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNP 66
++V + +G PTL+++G +LT +A EGKLDPV+GR+ + +RV++IL RRTKNNP
Sbjct: 147 QSVSSNNSKKENGEPTPTLDQFGRDLTDMAREGKLDPVIGREKETQRVLEILSRRTKNNP 206
Query: 67 CLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKL 126
CLIG+PGVGKTAIAEGLA++I + ++P+ ++GK+V+TLD+ ++AG+KYRGEFEERLKK+
Sbjct: 207 CLIGDPGVGKTAIAEGLAEKIVAANIPELLKGKRVVTLDLSSMIAGSKYRGEFEERLKKV 266
Query: 127 MEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHI 186
MEEI++S +ILFIDE+HT+IGAGAAEGAIDA+NILKP+LARGE+QCIGATT+DEYRK+I
Sbjct: 267 MEEIRKSGNVILFIDEIHTIIGAGAAEGAIDASNILKPALARGEIQCIGATTIDEYRKYI 326
Query: 187 EKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISD 246
EKD ALERRFQP+ V EP+ +E + ILKGLR++YE HH+++ TDEA+ +A LS +YI+D
Sbjct: 327 EKDAALERRFQPILVGEPTKEEAVLILKGLRDKYEAHHRVKITDEAIEAAVNLSDRYITD 386
Query: 247 RFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRD 306
R+LPDKAIDLIDEA ++VR+++ P + + LE EL + TKEK +++R QDFEKA +LRD
Sbjct: 387 RYLPDKAIDLIDEAAAKVRIQNLIAPPDLKNLEVELEKATKEKEDSIRLQDFEKAAKLRD 446
Query: 307 REMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDR 366
E +LK ++ L K + T +V E I +VS WT +PVEK++ E R
Sbjct: 447 IEKELKDKLEGLKTNWKTKKEVST------LLVGEEKIASVVSQWTNVPVEKLTEKELQR 500
Query: 367 LLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKAL 426
LLK+E+ LHKRVIGQDEAVK+I+RA+RR+RVGLK+P RPI SFIF GPTGVGK+EL+KAL
Sbjct: 501 LLKLEDILHKRVIGQDEAVKSIARAVRRSRVGLKDPKRPIGSFIFLGPTGVGKTELSKAL 560
Query: 427 AAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDE 486
A FG E +IR+DMSE+ME+HTVSKLIGSPPGYVGY EGGQLTE VRR PY+VVLFDE
Sbjct: 561 AEAMFGDENNLIRIDMSEYMEKHTVSKLIGSPPGYVGYDEGGQLTEKVRRNPYSVVLFDE 620
Query: 487 IEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDY 546
IEKAHP+VFN++LQILEDGRLTD KG+T++FKNT++IMTSNVG S I+K + +GF +
Sbjct: 621 IEKAHPEVFNILLQILEDGRLTDGKGKTINFKNTIIIMTSNVGVSTIKK-QKSMGFTIVS 679
Query: 547 D-EKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRL 605
D EK Y+++K + EELK FRPEFLNR+D++IVF QL + ++K+I IML +V RL
Sbjct: 680 DNEKQDEYDKMKDNIMEELKTSFRPEFLNRIDDIIVFHQLQEDDLKQIVKIMLNDVSMRL 739
Query: 606 KTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIV 665
K KDI++ E+ +E + +EG++ +YGARPLRRAI + +ED ++E+ML +K GD V V
Sbjct: 740 KEKDIDINFNEKAQELLAKEGFDITYGARPLRRAITKTVEDKLSEEMLKGNVKRGDKVEV 799
Query: 666 DV 667
V
Sbjct: 800 AV 801
>gi|219853499|ref|YP_002470621.1| hypothetical protein CKR_0156 [Clostridium kluyveri NBRC 12016]
gi|219567223|dbj|BAH05207.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 816
Score = 816 bits (2109), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/662 (59%), Positives = 525/662 (79%), Gaps = 8/662 (1%)
Query: 7 EAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNP 66
++V + +G PTL+++G +LT +A EGKLDPV+GR+ + +RV++IL RRTKNNP
Sbjct: 151 QSVSSNNSKKENGEPTPTLDQFGRDLTDMAREGKLDPVIGREKETQRVLEILSRRTKNNP 210
Query: 67 CLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKL 126
CLIG+PGVGKTAIAEGLA++I + ++P+ ++GK+V+TLD+ ++AG+KYRGEFEERLKK+
Sbjct: 211 CLIGDPGVGKTAIAEGLAEKIVAANIPELLKGKRVVTLDLSSMIAGSKYRGEFEERLKKV 270
Query: 127 MEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHI 186
MEEI++S +ILFIDE+HT+IGAGAAEGAIDA+NILKP+LARGE+QCIGATT+DEYRK+I
Sbjct: 271 MEEIRKSGNVILFIDEIHTIIGAGAAEGAIDASNILKPALARGEIQCIGATTIDEYRKYI 330
Query: 187 EKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISD 246
EKD ALERRFQP+ V EP+ +E + ILKGLR++YE HH+++ TDEA+ +A LS +YI+D
Sbjct: 331 EKDAALERRFQPILVGEPTKEEAVLILKGLRDKYEAHHRVKITDEAIEAAVNLSDRYITD 390
Query: 247 RFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRD 306
R+LPDKAIDLIDEA ++VR+++ P + + LE EL + TKEK +++R QDFEKA +LRD
Sbjct: 391 RYLPDKAIDLIDEAAAKVRIQNLIAPPDLKNLEVELEKATKEKEDSIRLQDFEKAAKLRD 450
Query: 307 REMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDR 366
E +LK ++ L K + T +V E I +VS WT +PVEK++ E R
Sbjct: 451 IEKELKDKLEGLKTNWKTKKEVST------LLVGEEKIASVVSQWTNVPVEKLTEKELQR 504
Query: 367 LLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKAL 426
LLK+E+ LHKRVIGQDEAVK+I+RA+RR+RVGLK+P RPI SFIF GPTGVGK+EL+KAL
Sbjct: 505 LLKLEDILHKRVIGQDEAVKSIARAVRRSRVGLKDPKRPIGSFIFLGPTGVGKTELSKAL 564
Query: 427 AAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDE 486
A FG E +IR+DMSE+ME+HTVSKLIGSPPGYVGY EGGQLTE VRR PY+VVLFDE
Sbjct: 565 AEAMFGDENNLIRIDMSEYMEKHTVSKLIGSPPGYVGYDEGGQLTEKVRRNPYSVVLFDE 624
Query: 487 IEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDY 546
IEKAHP+VFN++LQILEDGRLTD KG+T++FKNT++IMTSNVG S I+K + +GF +
Sbjct: 625 IEKAHPEVFNILLQILEDGRLTDGKGKTINFKNTIIIMTSNVGVSTIKK-QKSMGFTIVS 683
Query: 547 D-EKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRL 605
D EK Y+++K + EELK FRPEFLNR+D++IVF QL + ++K+I IML +V RL
Sbjct: 684 DNEKQDEYDKMKDNIMEELKTSFRPEFLNRIDDIIVFHQLQEDDLKQIVKIMLNDVSMRL 743
Query: 606 KTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIV 665
K KDI++ E+ +E + +EG++ +YGARPLRRAI + +ED ++E+ML +K GD V V
Sbjct: 744 KEKDIDINFNEKAQELLAKEGFDITYGARPLRRAITKTVEDKLSEEMLKGNVKRGDKVEV 803
Query: 666 DV 667
V
Sbjct: 804 AV 805
>gi|222529809|ref|YP_002573691.1| ATPase AAA-2 domain-containing protein [Caldicellulosiruptor bescii
DSM 6725]
gi|222456656|gb|ACM60918.1| ATPase AAA-2 domain protein [Caldicellulosiruptor bescii DSM 6725]
Length = 829
Score = 816 bits (2109), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/663 (60%), Positives = 525/663 (79%), Gaps = 8/663 (1%)
Query: 23 PTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEG 82
PTL ++ +LT+LA EGK+DPV+GR+ +IERV+QIL RRTKNNPCLIGEPGVGKTAI EG
Sbjct: 168 PTLNQFSRDLTQLALEGKIDPVIGREKEIERVIQILSRRTKNNPCLIGEPGVGKTAIVEG 227
Query: 83 LAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDE 142
LAQ+I G+VP+ + K+V+ LD+ +VAG+K+RGEFEERLKK MEE++++ +ILFIDE
Sbjct: 228 LAQKIVEGNVPELLRNKRVVALDLSAMVAGSKFRGEFEERLKKAMEEVRKAGNVILFIDE 287
Query: 143 VHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVP 202
+HT+IGAGAAEGAIDA+NILKP+LARGE+Q IGATTLDEYRKHIEKD ALERRFQP+ V
Sbjct: 288 MHTIIGAGAAEGAIDASNILKPALARGEIQVIGATTLDEYRKHIEKDAALERRFQPILVG 347
Query: 203 EPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGS 262
EP+ +E IQILKGLR++YE HH ++ TDEA+ +A +LS +YI+DR+LPDKAIDLIDEA S
Sbjct: 348 EPTPEEAIQILKGLRDKYEAHHGVKITDEAIKAAVELSTKYITDRYLPDKAIDLIDEAAS 407
Query: 263 RVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKG 322
RVRLR LP +E E+++ ++ KEK EA+R Q++EKA ++RD M L+ ++ + +
Sbjct: 408 RVRLRMYTLPPHVKEFEEKIEKLEKEKEEAIRLQEYEKAAKIRDEIMKLRQELEKIKNSW 467
Query: 323 KEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQD 382
+ P+VTE DI +IVS+WTGIPV K++ DES+RLLK+EE LH+RV+GQD
Sbjct: 468 T------NDQQKTQPIVTEDDIAYIVSSWTGIPVNKLTEDESERLLKLEEVLHRRVVGQD 521
Query: 383 EAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDM 442
EAVKA++RAIRR RVGLK+P RPI SFIF GPTGVGK+ELA+ALA FG+E+AMIR+DM
Sbjct: 522 EAVKAVARAIRRGRVGLKDPKRPIGSFIFLGPTGVGKTELARALAEALFGTEDAMIRIDM 581
Query: 443 SEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQIL 502
SE+ME+ VSKLIGSPPGYVGY EGGQLTE VRRRPY+VVLFDEIEKAHPDVFN++LQIL
Sbjct: 582 SEYMEKFNVSKLIGSPPGYVGYEEGGQLTEKVRRRPYSVVLFDEIEKAHPDVFNLLLQIL 641
Query: 503 EDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTE 562
+DGRLTDS+GRTV F+NT++IMTSN+G+++I +++GF DEK +Y RIK V
Sbjct: 642 DDGRLTDSQGRTVSFRNTVIIMTSNIGANLI-TNPKKLGFSTSEDEKQRTYERIKENVMA 700
Query: 563 ELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERV 622
ELK+ FRPEFLNR+DE+IVF L + +VK+I +IMLK + +R+K + + T E +
Sbjct: 701 ELKKTFRPEFLNRIDEIIVFHPLDEEDVKKIVEIMLKNLQERIKASEYYAEFTSSLVEAI 760
Query: 623 VEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNGSSGA 682
++G++P +GARPL+RAI ++ED ++E +L +IK+GD IVD DGN ++ +
Sbjct: 761 AKKGFDPVFGARPLKRAIQSMVEDKISEAILEGKIKQGDEFIVDF-IDGNTEIIKKEKAS 819
Query: 683 PES 685
S
Sbjct: 820 TSS 822
>gi|289579183|ref|YP_003477810.1| ATPase AAA [Thermoanaerobacter italicus Ab9]
gi|289528896|gb|ADD03248.1| ATPase AAA-2 domain protein [Thermoanaerobacter italicus Ab9]
Length = 816
Score = 816 bits (2109), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/665 (61%), Positives = 536/665 (80%), Gaps = 13/665 (1%)
Query: 14 GGGSSGNKM-----PTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCL 68
GG + K+ PTL ++G +LT+LA +GKLDPV+GR+ +IERV+QIL RRTKNNP L
Sbjct: 149 GGPAKATKVKNTNTPTLNQFGRDLTELARDGKLDPVIGREKEIERVIQILSRRTKNNPVL 208
Query: 69 IGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLME 128
IGEPGVGKTAI EGLAQ+I G++P+ ++ K+V+TLDM +VAGTKYRGEFE+RLK ++
Sbjct: 209 IGEPGVGKTAIVEGLAQKIVEGEIPEILKDKRVVTLDMASMVAGTKYRGEFEDRLKTVLN 268
Query: 129 EIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEK 188
E+ ++ +ILFIDE+HTLIGAGAAEGAIDA+NILKP+LARGE+Q +GATTL+EYRK++E+
Sbjct: 269 EVIKAGNVILFIDEMHTLIGAGAAEGAIDASNILKPALARGEIQVVGATTLEEYRKYVER 328
Query: 189 DPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRF 248
DPALERRFQP+ V EP+V+ETI+ILKGLR++YE HH+++ TDEAL +AA+LS++YI+DRF
Sbjct: 329 DPALERRFQPIIVDEPTVEETIEILKGLRDKYEAHHRVKITDEALEAAARLSHRYIADRF 388
Query: 249 LPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDRE 308
LPDKAIDLIDEA SRVRL+ P E +ELE ++ + KEK EA++ Q++EKA ++RD E
Sbjct: 389 LPDKAIDLIDEAASRVRLKTVTAPPEIKELEDKINDLIKEKEEAIKTQEYEKAAKIRDEE 448
Query: 309 MDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLL 368
L+ ++ L K K + + VGP +I +VS WTGIPV+K++ +ES+RLL
Sbjct: 449 QKLREELEKL--KAKWQQNSLSNEKSVGP----EEIAQVVSLWTGIPVKKLAEEESERLL 502
Query: 369 KMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAA 428
+EE LH+RVIGQ+EAV+A++RAIRRARVGLK+P RPI SFIF GPTGVGK+EL KALA
Sbjct: 503 HLEEILHERVIGQNEAVEAVARAIRRARVGLKDPKRPIGSFIFLGPTGVGKTELTKALAE 562
Query: 429 YYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIE 488
FG E AMIRLDMSE+MERHTVSKLIGSPPGYVG+ EGGQLTE VRR+PY+V+L DEIE
Sbjct: 563 ALFGDENAMIRLDMSEYMERHTVSKLIGSPPGYVGFEEGGQLTEKVRRKPYSVILLDEIE 622
Query: 489 KAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDE 548
KAHPDVFN++LQILEDGRLTDSKGRTVDFKNT++IMTSNVG+ +++K +GF E
Sbjct: 623 KAHPDVFNILLQILEDGRLTDSKGRTVDFKNTVIIMTSNVGAELLKKQA-TLGFMPQEKE 681
Query: 549 KDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTK 608
+S+ ++K + EL++ FRPEFLNR+DE+IVF QLTK ++++IADIM+KE+ DRLK
Sbjct: 682 DKASHEKVKETLMAELRKTFRPEFLNRVDEIIVFHQLTKEDIEKIADIMMKELNDRLKEN 741
Query: 609 DIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVD 668
+I+L+ T +E ++++GY+P+YGARPLRR I R++E+ ++E ML ++K GD +IV
Sbjct: 742 NIKLEFTPEGKEEIIKQGYDPNYGARPLRRVIQRIVENQLSELMLQGKVKPGDELIVTA- 800
Query: 669 SDGNV 673
DG +
Sbjct: 801 KDGKI 805
>gi|403382836|ref|ZP_10924893.1| protein ClpC [Paenibacillus sp. JC66]
Length = 807
Score = 816 bits (2108), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/671 (59%), Positives = 523/671 (77%), Gaps = 10/671 (1%)
Query: 5 STEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKN 64
S E V + G ++ N PTL+ +LT +A+EG LDPV+GR +IERV+Q+L RRTKN
Sbjct: 144 SNEVVSSNHGSTNNVN-TPTLDSLARDLTAIAKEGNLDPVIGRSKEIERVIQVLSRRTKN 202
Query: 65 NPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLK 124
NP LIGEPGVGKTAIAEGLAQ+I + ++P+T+ K+V+TLDMG +VAGTKYRGEFE+RLK
Sbjct: 203 NPVLIGEPGVGKTAIAEGLAQKIINNEIPETLRDKRVMTLDMGSVVAGTKYRGEFEDRLK 262
Query: 125 KLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRK 184
K+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTLDEYRK
Sbjct: 263 KIMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEYRK 322
Query: 185 HIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYI 244
+IEKD ALERRFQP+ V +PS +E IQIL GLR+RYE HH+++ D ++ +A +LS +YI
Sbjct: 323 YIEKDAALERRFQPITVDQPSPEEAIQILHGLRDRYEAHHRVKIPDVSIETAVKLSDRYI 382
Query: 245 SDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGEL 304
+DRFLPDKAIDLIDEAGS+VRLR +P +ELE L I KEK+ AV+ Q+FEKA L
Sbjct: 383 TDRFLPDKAIDLIDEAGSKVRLRSYTVPPNLKELESRLENIRKEKDSAVQSQEFEKAASL 442
Query: 305 RDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDES 364
RD E L+ ++ ++ KE + G VT DI +V++WTGIPV K+ +E+
Sbjct: 443 RDTEQKLREELEVTKNEWKE------KQGRTDSEVTPEDIAQVVASWTGIPVIKLKEEET 496
Query: 365 DRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAK 424
+RLLKME+ LH RVIGQ EAVKA+S+AIRRAR GLK+P RP+ SFIF GPTGVGK+ELA+
Sbjct: 497 ERLLKMEDILHSRVIGQSEAVKAVSQAIRRARAGLKDPKRPMGSFIFLGPTGVGKTELAR 556
Query: 425 ALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLF 484
ALA FG E A+IR+DMSE+ME+H+ S+L+G+PPGYVGY EGGQLTE VRR+PY+VVL
Sbjct: 557 ALAESMFGDENAIIRIDMSEYMEKHSTSRLVGAPPGYVGYDEGGQLTEKVRRKPYSVVLL 616
Query: 485 DEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDL 544
DEIEKAHP+VFN++LQ+LEDGRLTDSKGRTVDF+NTL+IMTSNVG+ +I+K +GF
Sbjct: 617 DEIEKAHPEVFNILLQVLEDGRLTDSKGRTVDFRNTLIIMTSNVGADLIKKNS-ALGFTA 675
Query: 545 DYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDR 604
+ D YN +K V ELK+ FRPEFLNR+DE+IVF L + + EI +M +E+ R
Sbjct: 676 NLD-AGHDYNNMKDKVMTELKKSFRPEFLNRIDELIVFHALDQEHINEIVTLMSEELRKR 734
Query: 605 LKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVI 664
LK ++++ +TE ++ + +EGY+P+YGARPLRRAI + +ED ++E++L I +GD++
Sbjct: 735 LKEQEVDFILTESAKKFLAKEGYDPAYGARPLRRAIQKHIEDRLSEELLKGNISKGDTLT 794
Query: 665 VDVDSDGNVTV 675
+D + +G +TV
Sbjct: 795 ID-EKEGELTV 804
>gi|15896437|ref|NP_349786.1| ABC transporter ATPase [Clostridium acetobutylicum ATCC 824]
gi|337738395|ref|YP_004637842.1| ABC transporter ATPase [Clostridium acetobutylicum DSM 1731]
gi|384459905|ref|YP_005672325.1| ATPase with chaperone activity clpC, two ATP-binding domain protein
[Clostridium acetobutylicum EA 2018]
gi|15026259|gb|AAK81126.1|AE007814_4 ATPases with chaperone activity clpC, two ATP-binding domain
[Clostridium acetobutylicum ATCC 824]
gi|325510594|gb|ADZ22230.1| ATPase with chaperone activity clpC, two ATP-binding domain protein
[Clostridium acetobutylicum EA 2018]
gi|336293592|gb|AEI34726.1| ABC transporter ATPase [Clostridium acetobutylicum DSM 1731]
Length = 813
Score = 816 bits (2108), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/664 (58%), Positives = 520/664 (78%), Gaps = 7/664 (1%)
Query: 7 EAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNP 66
E G S+ + PTL +YGT+LT++A EGKLDPV+GR + +R+++IL RRTKNNP
Sbjct: 149 ENTGIKTSFSSNTSVTPTLNQYGTDLTQMALEGKLDPVIGRDNETQRILEILCRRTKNNP 208
Query: 67 CLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKL 126
CLIG+PGVGKTAIAEGLAQ+I G++P+ ++ K+VITLD+ LVAG+KYRGEFEERLKK+
Sbjct: 209 CLIGDPGVGKTAIAEGLAQKIVEGNIPEILKDKRVITLDVSSLVAGSKYRGEFEERLKKV 268
Query: 127 MEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHI 186
M EIK + +ILFIDE+HT++GAG AEGAIDA+NILKPSLARGE+QCIGATT +EYR++I
Sbjct: 269 MTEIKAAKNVILFIDEIHTIVGAGGAEGAIDASNILKPSLARGEIQCIGATTTEEYRRYI 328
Query: 187 EKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISD 246
EKD ALERRFQPV V EPS +E +QIL+GLR++YE HH ++ TD+A+ +A LS +YI D
Sbjct: 329 EKDAALERRFQPVDVGEPSKEEAVQILEGLRDKYEAHHGVKITDDAIEAAVNLSTRYIQD 388
Query: 247 RFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRD 306
RFLPDKAIDLIDEA ++VR+++ P + + E+EL + T+EK++A+R QDFEKA +LRD
Sbjct: 389 RFLPDKAIDLIDEAAAKVRIQNLTAPPDLKNQEEELEKTTREKSDAIRLQDFEKAAKLRD 448
Query: 307 REMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDR 366
+E L+ I K S E +VT+ + +V+ WT IPVEK++ ES+R
Sbjct: 449 KEKKLRIAIEEFKKNWKNTSDNENY------IVTQKQVAAVVAKWTSIPVEKLTEKESER 502
Query: 367 LLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKAL 426
LLK+E LHKRVIGQ+EAV+ +SRA+RRARVGLK+P RPI SFIF GPTGVGK+EL+KAL
Sbjct: 503 LLKLESILHKRVIGQEEAVEYVSRAVRRARVGLKDPKRPIGSFIFLGPTGVGKTELSKAL 562
Query: 427 AAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDE 486
A FG E +IR+DMSE+ME+HTVS+L+GSPPGYVGY EGGQLTE VRR+PY+VVLFDE
Sbjct: 563 AEAMFGDENNIIRIDMSEYMEKHTVSRLVGSPPGYVGYDEGGQLTEKVRRKPYSVVLFDE 622
Query: 487 IEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDY 546
IEKAHPDVFN++LQIL+DGRLTDSKG+TV F NT++IMTSNVG+S I K + +GF+
Sbjct: 623 IEKAHPDVFNILLQILDDGRLTDSKGKTVSFTNTIIIMTSNVGASTIRK-QKTLGFETAK 681
Query: 547 DEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLK 606
D Y+++K + EELK FRPEFLNR+DE++VF +L + ++++I +ML+ V RLK
Sbjct: 682 DAVRQEYDKMKENIMEELKNSFRPEFLNRIDEIVVFHKLEEKDLRQIVKLMLESVKGRLK 741
Query: 607 TKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVD 666
++I++ TE+ E + E+G++P+YGARPLRR I++ +ED ++E++L I + D++ VD
Sbjct: 742 EQNIKINFTEKAEEVLAEKGFDPTYGARPLRRTIIKAVEDKLSEEILKGTISKNDNISVD 801
Query: 667 VDSD 670
VD D
Sbjct: 802 VDKD 805
>gi|312621967|ref|YP_004023580.1| ATPase AAA-2 domain-containing protein [Caldicellulosiruptor
kronotskyensis 2002]
gi|312202434|gb|ADQ45761.1| ATPase AAA-2 domain protein [Caldicellulosiruptor kronotskyensis
2002]
Length = 829
Score = 816 bits (2108), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/663 (60%), Positives = 525/663 (79%), Gaps = 8/663 (1%)
Query: 23 PTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEG 82
PTL ++ +LT+LA EGK+DPV+GR+ +IERV+QIL RRTKNNPCLIGEPGVGKTAI EG
Sbjct: 168 PTLNQFSRDLTQLALEGKIDPVIGREKEIERVIQILSRRTKNNPCLIGEPGVGKTAIVEG 227
Query: 83 LAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDE 142
LAQ+I G+VP+ + K+V+ LD+ +VAG+K+RGEFEERLKK MEE++++ +ILFIDE
Sbjct: 228 LAQKIVEGNVPELLRNKRVVALDLSAMVAGSKFRGEFEERLKKAMEEVRKAGNVILFIDE 287
Query: 143 VHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVP 202
+HT+IGAGAAEGAIDA+NILKP+LARGE+Q IGATTLDEYRKHIEKD ALERRFQP+ V
Sbjct: 288 MHTIIGAGAAEGAIDASNILKPALARGEIQVIGATTLDEYRKHIEKDAALERRFQPILVG 347
Query: 203 EPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGS 262
EP+ +E IQILKGLR++YE HH ++ TDEA+ +A +LS +YI+DR+LPDKAIDLIDEA S
Sbjct: 348 EPTPEEAIQILKGLRDKYEAHHGVKITDEAIKAAVELSTKYITDRYLPDKAIDLIDEAAS 407
Query: 263 RVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKG 322
RVRLR LP +E E+++ ++ KEK EA+R Q++EKA ++RD M L+ ++ + +
Sbjct: 408 RVRLRMYTLPPHVKEFEEKIEKLEKEKEEAIRLQEYEKAAKIRDEIMKLRQELEKIKNSW 467
Query: 323 KEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQD 382
+ P+VTE DI +IVS+WTGIPV K++ DES+RLLK+EE LH+RV+GQD
Sbjct: 468 T------NDQQKTQPIVTEDDIAYIVSSWTGIPVNKLTEDESERLLKLEEVLHRRVVGQD 521
Query: 383 EAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDM 442
EAVKA++RAIRR RVGLK+P RPI SFIF GPTGVGK+ELA+ALA FG+E+AMIR+DM
Sbjct: 522 EAVKAVARAIRRGRVGLKDPKRPIGSFIFLGPTGVGKTELARALAEALFGTEDAMIRIDM 581
Query: 443 SEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQIL 502
SE+ME+ VSKLIGSPPGYVGY EGGQLTE VRRRPY+VVLFDEIEKAHPDVFN++LQIL
Sbjct: 582 SEYMEKFNVSKLIGSPPGYVGYEEGGQLTEKVRRRPYSVVLFDEIEKAHPDVFNLLLQIL 641
Query: 503 EDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTE 562
+DGRLTDS+GRTV F+NT++IMTSN+G+++I +++GF DEK +Y RIK V
Sbjct: 642 DDGRLTDSQGRTVSFRNTVIIMTSNIGANLI-TNPKKLGFSTSEDEKQRTYERIKENVMA 700
Query: 563 ELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERV 622
ELK+ FRPEFLNR+DE+IVF L + +VK+I +IMLK + +R+K + + T E +
Sbjct: 701 ELKKTFRPEFLNRIDEIIVFHPLDEEDVKKIVEIMLKNLQERIKASEYYAEFTPSLVEAI 760
Query: 623 VEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNGSSGA 682
++G++P +GARPL+RAI ++ED ++E +L +IK+GD IVD DGN ++ +
Sbjct: 761 AKKGFDPVFGARPLKRAIQSMVEDKISEAILEGKIKQGDEFIVDF-VDGNTEIIKKEKAS 819
Query: 683 PES 685
S
Sbjct: 820 TSS 822
>gi|15612666|ref|NP_240969.1| class III stress response-related ATPase [Bacillus halodurans
C-125]
gi|10172715|dbj|BAB03822.1| class III stress response-related ATPase [Bacillus halodurans
C-125]
Length = 813
Score = 816 bits (2108), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 398/669 (59%), Positives = 518/669 (77%), Gaps = 9/669 (1%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
++G + + + GGG++ PTL+ +LT +A E LDPV+GR +IERV+Q+L R
Sbjct: 141 LLGSNETSSSSQQGGGAANANTPTLDSLARDLTAIAREEGLDPVIGRSKEIERVIQVLSR 200
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNP LIGEPGVGKTAIAEGLAQ I +VP+T+ K+V+TLDMG +VAGTKYRGEFE
Sbjct: 201 RTKNNPVLIGEPGVGKTAIAEGLAQAIIHNEVPETLRNKRVMTLDMGTVVAGTKYRGEFE 260
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
+RLKK+M+EI+Q+ +ILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTLD
Sbjct: 261 DRLKKVMDEIRQAGNVILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLD 320
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRK+IEKD ALERRFQP++V EPS+DE+IQILKGLR+RYE HH++ TDEA+ A +LS
Sbjct: 321 EYRKYIEKDAALERRFQPIQVNEPSLDESIQILKGLRDRYEAHHRVTITDEAIEEAVKLS 380
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
+YI DRFLPDKAIDLIDEA S+VRLR P +ELE++L + KEK+ AV+ Q+FEK
Sbjct: 381 DRYIQDRFLPDKAIDLIDEAASKVRLRSYTAPPNLKELEQKLEETRKEKDAAVQSQEFEK 440
Query: 301 AGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVS 360
A LRD E ++ ++ + + K+ + G V DI +V++WTGIPV K++
Sbjct: 441 AASLRDSEQRIREELDQMKNDWKQ------KQGQENTQVVVDDIAQVVASWTGIPVSKLA 494
Query: 361 TDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 420
+E++RLLKMEE LHKRVIGQ+EAVKAIS+A+RRAR GLK+P RPI SFIF GPTGVGK+
Sbjct: 495 EEETERLLKMEEILHKRVIGQEEAVKAISKAVRRARAGLKDPKRPIGSFIFLGPTGVGKT 554
Query: 421 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 480
ELA+A+A FG E+A IR+DMSE+ME+H S+L+GSPPGYVG+ EGGQLTE VRR+PY+
Sbjct: 555 ELARAVAETLFGDEDAFIRIDMSEYMEKHATSRLVGSPPGYVGHDEGGQLTEKVRRKPYS 614
Query: 481 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI 540
V+L DEIEKAHP+VFN++LQ+LEDGRLTDSKGRTVDF+NT +IMTSNVG+S + K + +
Sbjct: 615 VILLDEIEKAHPEVFNILLQVLEDGRLTDSKGRTVDFRNTAVIMTSNVGASTLRK-NKFL 673
Query: 541 GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 600
GF D + S Y +K V ELK FRPEFLNR+DE+IVF L K V+EI +M +
Sbjct: 674 GFTTDSE--GSEYKDMKDKVMTELKNSFRPEFLNRIDEIIVFHSLEKKHVREIITLMADQ 731
Query: 601 VFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEG 660
+ RL+ + + ++TE ++++ + GY+P YGARPLRRA+ R +ED ++E++L I++G
Sbjct: 732 LKKRLEEQGVSFELTEAAKDKITDLGYDPEYGARPLRRALQREVEDRLSEELLKGTIQKG 791
Query: 661 DSVIVDVDS 669
I+DV++
Sbjct: 792 QRAIIDVEN 800
>gi|312793061|ref|YP_004025984.1| ATPase AAA-2 domain-containing protein [Caldicellulosiruptor
kristjanssonii 177R1B]
gi|312180201|gb|ADQ40371.1| ATPase AAA-2 domain protein [Caldicellulosiruptor kristjanssonii
177R1B]
Length = 829
Score = 816 bits (2107), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/663 (60%), Positives = 525/663 (79%), Gaps = 8/663 (1%)
Query: 23 PTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEG 82
PTL ++ +LT+LA EGK+DPV+GR+ +IERV+QIL RRTKNNPCLIGEPGVGKTAI EG
Sbjct: 168 PTLNQFSRDLTQLALEGKIDPVIGREKEIERVIQILSRRTKNNPCLIGEPGVGKTAIVEG 227
Query: 83 LAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDE 142
LAQ+I G+VP+ + K+V+ LD+ +VAG+K+RGEFEERLKK MEE++++ +ILFIDE
Sbjct: 228 LAQKIVEGNVPELLRNKRVVALDLSAMVAGSKFRGEFEERLKKAMEEVRKAGNVILFIDE 287
Query: 143 VHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVP 202
+HT+IGAGAAEGAIDA+NILKP+LARGE+Q IGATTLDEYRKHIEKD ALERRFQP+ V
Sbjct: 288 MHTIIGAGAAEGAIDASNILKPALARGEIQVIGATTLDEYRKHIEKDAALERRFQPILVG 347
Query: 203 EPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGS 262
EP+ +E IQILKGLR++YE HH ++ TDEA+ +A +LS +YI+DR+LPDKAIDLIDEA S
Sbjct: 348 EPTPEEAIQILKGLRDKYEAHHGVKITDEAIKAAVELSTKYITDRYLPDKAIDLIDEAAS 407
Query: 263 RVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKG 322
RVRLR LP +E E+++ ++ KEK EA+R Q++EKA ++RD M L+ ++ + +
Sbjct: 408 RVRLRMYTLPPHVKEFEEKIEKLEKEKEEAIRLQEYEKAAKIRDEIMKLRQELEKIKNSW 467
Query: 323 KEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQD 382
+ P+VTE DI +IVS+WTGIPV +++ DES+RLLK+EE LH+RV+GQD
Sbjct: 468 T------NDQQKTQPIVTEDDIAYIVSSWTGIPVNRLTEDESERLLKLEEVLHRRVVGQD 521
Query: 383 EAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDM 442
EAVKA++RAIRR RVGLK+P RPI SFIF GPTGVGK+ELA+ALA FG+E+AMIR+DM
Sbjct: 522 EAVKAVARAIRRGRVGLKDPKRPIGSFIFLGPTGVGKTELARALAEALFGTEDAMIRIDM 581
Query: 443 SEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQIL 502
SE+ME+ VSKLIGSPPGYVGY EGGQLTE VRRRPY+VVLFDEIEKAHPDVFN++LQIL
Sbjct: 582 SEYMEKFNVSKLIGSPPGYVGYEEGGQLTEKVRRRPYSVVLFDEIEKAHPDVFNLLLQIL 641
Query: 503 EDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTE 562
+DGRLTDS+GRTV F+NT++IMTSN+G+++I +++GF DEK +Y RIK V
Sbjct: 642 DDGRLTDSQGRTVSFRNTVIIMTSNIGANLI-TNPKKLGFSTSEDEKQRTYERIKENVMT 700
Query: 563 ELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERV 622
ELK+ FRPEFLNR+DE+IVF L + +VK+I +IMLK + +R+K + + T E +
Sbjct: 701 ELKKTFRPEFLNRIDEIIVFHPLDEEDVKKIVEIMLKNLQERIKASEYYAEFTTSLVEAI 760
Query: 623 VEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNGSSGA 682
++G++P +GARPL+RAI ++ED ++E +L +IK+GD IVD DGN ++ +
Sbjct: 761 AKKGFDPVFGARPLKRAIQSMVEDKISEAILEGKIKQGDEFIVDY-VDGNTVIIKKEKAS 819
Query: 683 PES 685
S
Sbjct: 820 TSS 822
>gi|410461714|ref|ZP_11315360.1| Class III stress response-related ATPase, ClpC [Bacillus
azotoformans LMG 9581]
gi|409925481|gb|EKN62692.1| Class III stress response-related ATPase, ClpC [Bacillus
azotoformans LMG 9581]
Length = 807
Score = 815 bits (2106), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/661 (60%), Positives = 516/661 (78%), Gaps = 10/661 (1%)
Query: 14 GGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPG 73
GG + PTL+ +LT++A EG LDPV+GR +I+RV+++L RRTKNNP LIGEPG
Sbjct: 154 GGVVANANTPTLDSLARDLTQIAREGSLDPVIGRGKEIQRVIEVLSRRTKNNPVLIGEPG 213
Query: 74 VGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQS 133
VGKTAIAEGLAQ+I +VP+ + K+V+TLDMG +VAGTKYRGEFE+RLKK+M+EI+Q+
Sbjct: 214 VGKTAIAEGLAQQIVQNEVPEILRNKRVMTLDMGTVVAGTKYRGEFEDRLKKVMDEIRQA 273
Query: 134 DEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALE 193
IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTLDEYRK+IEKD ALE
Sbjct: 274 GNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEYRKYIEKDAALE 333
Query: 194 RRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKA 253
RRFQP++V EP+ +E IQIL GLR+RYE HH++ TDEA+ A +LS +YISDRFLPDKA
Sbjct: 334 RRFQPIQVGEPTQEEAIQILYGLRDRYEAHHRVSITDEAIEEAVKLSARYISDRFLPDKA 393
Query: 254 IDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKA 313
IDLIDEAG++VRLR P +ELE++L +I KEK+ AV+ Q+FEKA LRD E L+
Sbjct: 394 IDLIDEAGAKVRLRSYTAPPNLKELEQKLEEIRKEKDAAVQSQEFEKAASLRDTEQRLRE 453
Query: 314 QISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEET 373
+ + KE E VT DI +VSAWTG+PV K++ E+DRLL ME
Sbjct: 454 DVEKTKKEWKERQGKENSE------VTTEDIALVVSAWTGVPVSKLAQAETDRLLNMESI 507
Query: 374 LHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGS 433
LH RVIGQ+EAVKAI++AIRRAR GLK+P RPI SFIF GPTGVGK+ELA+ALA FG
Sbjct: 508 LHSRVIGQEEAVKAIAKAIRRARSGLKDPKRPIGSFIFLGPTGVGKTELARALAEAMFGD 567
Query: 434 EEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPD 493
E+A+IR+DMSE+ME+HT S+L+GSPPGYVG+ EGGQLTE VRR+P++V+L DEIEKAHP+
Sbjct: 568 EDALIRIDMSEYMEKHTTSRLVGSPPGYVGHEEGGQLTEKVRRKPFSVILLDEIEKAHPE 627
Query: 494 VFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSY 553
VFN++LQ+LEDGRLTDSKGRTVDF+NT++IMTSNVG+S +++ + +GF++ ++ Y
Sbjct: 628 VFNILLQVLEDGRLTDSKGRTVDFRNTIVIMTSNVGASELKR-NKYVGFNV---QEGQEY 683
Query: 554 NRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQ 613
+KS V + LK+ FRPEFLNR+DE+IVF L K + EI +M E+ RLK +DI+
Sbjct: 684 KDMKSKVMDALKKAFRPEFLNRIDEIIVFHSLEKQHINEIITLMANELTKRLKEQDIDFA 743
Query: 614 VTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNV 673
+++ +E++ EG++P YGARPLRRA+ + +ED ++E++L I++G +I+DV++D V
Sbjct: 744 LSDAAKEKIANEGFDPEYGARPLRRALQKQVEDRLSEELLKGTIQKGHKIIIDVENDDYV 803
Query: 674 T 674
Sbjct: 804 V 804
>gi|295694806|ref|YP_003588044.1| ATPase AAA-2 domain-containing protein [Kyrpidia tusciae DSM 2912]
gi|295410408|gb|ADG04900.1| ATPase AAA-2 domain protein [Kyrpidia tusciae DSM 2912]
Length = 814
Score = 815 bits (2106), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/653 (62%), Positives = 525/653 (80%), Gaps = 9/653 (1%)
Query: 23 PTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEG 82
PTL+ +LT++A +GKLDPV+GR +IERV+Q+L RRTKNNP LIGEPGVGKTAIAEG
Sbjct: 160 PTLDSLARDLTQMARDGKLDPVIGRNKEIERVIQVLSRRTKNNPVLIGEPGVGKTAIAEG 219
Query: 83 LAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDE 142
LAQRI + ++P+T+ K+V+ LDMG +VAGTKYRGEFE+RLKK+M+EI+Q+ +ILFIDE
Sbjct: 220 LAQRIVANEIPETLRNKRVMVLDMGTVVAGTKYRGEFEDRLKKIMDEIRQAGNVILFIDE 279
Query: 143 VHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVP 202
+HTLIGAG AEGAIDA+NILKP+LARGELQCIGATTLDEYRKHIEKD ALERRFQP+ V
Sbjct: 280 LHTLIGAGGAEGAIDASNILKPALARGELQCIGATTLDEYRKHIEKDAALERRFQPIMVD 339
Query: 203 EPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGS 262
+P+ +E IQIL GLR+RYE HH+++ +DEAL +A +LS +YISDR+LPDKAIDLIDEA S
Sbjct: 340 QPTPEEAIQILHGLRDRYEAHHRVKISDEALEAAVRLSDRYISDRYLPDKAIDLIDEAAS 399
Query: 263 RVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKG 322
RVRLR P +ELE++L ++ KEK AV+ Q+FEKA LRD+E L+ ++ +K
Sbjct: 400 RVRLRTHTAPPNLKELEEQLEEVRKEKEAAVQSQEFEKAAALRDKEQRLREEL----EKR 455
Query: 323 KEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQD 382
K+ + + + D VV E DI IVS+WTGIPV+K++ +ES+RLL MEE LHKRVIGQD
Sbjct: 456 KQEWQQKQASKD--SVVIEEDIAEIVSSWTGIPVKKLAEEESERLLHMEEILHKRVIGQD 513
Query: 383 EAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDM 442
EAV+A+SRAIRRAR GLK+P RPI SFIF GPTGVGK+ELA+ALA FG E A++R+DM
Sbjct: 514 EAVEAVSRAIRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAEAMFGDENAVVRIDM 573
Query: 443 SEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQIL 502
SE+MERHT S+LIG+PPGYVGY EGGQLTE +RR+PY+VVL DEIEKAHP+VFN++LQ+L
Sbjct: 574 SEYMERHTTSRLIGAPPGYVGYEEGGQLTEKIRRKPYSVVLLDEIEKAHPEVFNILLQVL 633
Query: 503 EDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTE 562
+DGRLTD KGRTVDF+NT++IMTSNVG+ I +GG +GF +E+D +Y +K+ V E
Sbjct: 634 DDGRLTDGKGRTVDFRNTVIIMTSNVGAQSIRRGG-PLGFAARSEEED-AYKDMKNKVME 691
Query: 563 ELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERV 622
ELK+ FRPEFLNR+DE+IVF LT+ ++ I D+M+ ++ RL+ DI+ ++T+ + +
Sbjct: 692 ELKRQFRPEFLNRIDEVIVFHALTQQDIMRIVDLMVDDLRKRLRDHDIDFELTDDAKAFL 751
Query: 623 VEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTV 675
+EG++P+YGARPL+RAI R +ED ++E +L I +GD V +D DG +TV
Sbjct: 752 AKEGFDPTYGARPLKRAIQRHIEDRLSEALLNGTIVKGDRVRIDF-QDGALTV 803
>gi|333896156|ref|YP_004470030.1| ATPase AAA [Thermoanaerobacterium xylanolyticum LX-11]
gi|333111421|gb|AEF16358.1| ATPase AAA-2 domain protein [Thermoanaerobacterium xylanolyticum
LX-11]
Length = 810
Score = 815 bits (2106), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/649 (61%), Positives = 529/649 (81%), Gaps = 7/649 (1%)
Query: 17 SSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGK 76
+ P L ++G +LT+LA EGKLDPV+GR+ +IERV+QIL RRTKNNPCLIGEPGVGK
Sbjct: 157 AKNTNTPNLNQFGRDLTELAREGKLDPVIGREKEIERVIQILSRRTKNNPCLIGEPGVGK 216
Query: 77 TAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEI 136
TAIAEGLA+ I SG +P+ ++GK+V+TLDM +VAGTKYRGEFE+RLK ++ E+ ++ +
Sbjct: 217 TAIAEGLAEAIESGTIPEILKGKRVVTLDMASMVAGTKYRGEFEDRLKNVLNEVIKAGNV 276
Query: 137 ILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRF 196
ILFIDE+HT+IGAGAAEGAIDA+NILKP+LARGE+Q IGATT+DEYRK+IEKDPALERRF
Sbjct: 277 ILFIDELHTIIGAGAAEGAIDASNILKPALARGEIQVIGATTIDEYRKYIEKDPALERRF 336
Query: 197 QPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDL 256
QP+ V EPSV+ETI+ILKGLR++YE HH+++ TDEA+ +AA+LS++YI+DRFLPDKAIDL
Sbjct: 337 QPIMVEEPSVEETIEILKGLRDKYEAHHRIKITDEAIEAAAKLSHRYITDRFLPDKAIDL 396
Query: 257 IDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQIS 316
IDEA SRVRL+ P E +ELE +L + K+K EA+R Q++EKA ++RD E +K Q+
Sbjct: 397 IDEAASRVRLKTVTAPPEIKELEDKLNMLNKDKEEAIRTQEYEKAAKIRDEEQKVKEQLE 456
Query: 317 ALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHK 376
L K ++ S + ++ V +I IVS WTGIP +K++ +ES+RLL +EE LHK
Sbjct: 457 NLKSKWQQNSLVKEKS------VGAEEISQIVSLWTGIPTQKLAQEESERLLHLEEILHK 510
Query: 377 RVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEA 436
RVIGQDEAV A++RAIRRARVGLK+P RPI SFIF GPTGVGK+EL+KALA FG E A
Sbjct: 511 RVIGQDEAVDAVARAIRRARVGLKDPKRPIGSFIFLGPTGVGKTELSKALAEAMFGDESA 570
Query: 437 MIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFN 496
++R+DMSE+ME+ +VS+LIGSPPGYVGY EGG+LTE +RR+PY+V+LFDEIEKAHPDVFN
Sbjct: 571 IVRIDMSEYMEKFSVSRLIGSPPGYVGYEEGGELTEKIRRKPYSVILFDEIEKAHPDVFN 630
Query: 497 MMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRI 556
++LQIL+DGRLTDSKGRTVDFKNTL+IMTSNVG+ +I+K +GF + + + SY ++
Sbjct: 631 ILLQILDDGRLTDSKGRTVDFKNTLIIMTSNVGAQLIKK-QTTLGFMPESNAEKESYEKM 689
Query: 557 KSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTE 616
K + EELK+ FRPEFLNR+D++IVFRQLT+ ++++I D+M+ ++ RLK +I L+ T+
Sbjct: 690 KENILEELKKSFRPEFLNRIDDIIVFRQLTQDDIRKITDLMIADLNKRLKDNNISLEFTD 749
Query: 617 RFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIV 665
+E +++EGY+ +YGARPLRRAI +++E ++E ML EIK GD V+V
Sbjct: 750 DAKEELLKEGYDVTYGARPLRRAIQKVVESELSELMLKGEIKSGDKVLV 798
>gi|168187707|ref|ZP_02622342.1| negative regulator of genetic competence ClpC/mecB [Clostridium
botulinum C str. Eklund]
gi|169294451|gb|EDS76584.1| negative regulator of genetic competence ClpC/mecB [Clostridium
botulinum C str. Eklund]
Length = 813
Score = 815 bits (2106), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/648 (60%), Positives = 517/648 (79%), Gaps = 7/648 (1%)
Query: 23 PTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEG 82
PTL++YG +LTK+AEEGKLDPV+GR + ERV++IL RR KNNPCLIG+PGVGKTAIAEG
Sbjct: 165 PTLDKYGRDLTKMAEEGKLDPVIGRGAETERVLEILCRRIKNNPCLIGDPGVGKTAIAEG 224
Query: 83 LAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDE 142
LAQ+I G++P+ ++ K+V+ LD+ +VAG+KYRGEFEER+KK+M+EI + +ILFIDE
Sbjct: 225 LAQKIVQGNIPEILKNKRVVALDISSMVAGSKYRGEFEERVKKIMDEIYRDKNVILFIDE 284
Query: 143 VHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVP 202
+HT++GAG AEGAIDA+NILKP+LARGE+QCIGATT+DEYRK+IEKD ALERRFQPV V
Sbjct: 285 IHTIVGAGGAEGAIDASNILKPALARGEIQCIGATTIDEYRKYIEKDSALERRFQPVNVG 344
Query: 203 EPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGS 262
EP+ +E+I+IL+GLR++YE HH ++ TDEA+V+A +LS +YI+DRFLPDKAIDLIDEAG+
Sbjct: 345 EPTKEESIEILRGLRDKYEAHHGVKITDEAIVAAVELSDRYITDRFLPDKAIDLIDEAGA 404
Query: 263 RVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKG 322
+VR+++ P +++E EL +I KEK +AV QDFEKA LRD+E +LK Q+ D
Sbjct: 405 KVRIKNLTAPPSLKDMEVELEKIMKEKEDAVIVQDFEKAASLRDKEKNLKQQLKDFTDNW 464
Query: 323 KEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQD 382
K+ S TE V+E I +VS W+ +PVEK++ E+DRLLK+EETLHKRVIGQ+
Sbjct: 465 KKQSHMITET------VSEDQIAEVVSTWSNVPVEKLTEKEADRLLKLEETLHKRVIGQN 518
Query: 383 EAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDM 442
EAVK+I+RA+RRARVGLK+ RPI SFIF GPTGVGK+EL+KALA FG E MIR+DM
Sbjct: 519 EAVKSIARAVRRARVGLKDSKRPIGSFIFLGPTGVGKTELSKALAEAMFGDENNMIRIDM 578
Query: 443 SEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQIL 502
SE+ME+H VS+L+GSPPGY+G+ EGGQLTE VRR PY+V+LFDEIEKAHP+VFN++LQIL
Sbjct: 579 SEYMEKHAVSRLVGSPPGYIGHDEGGQLTEQVRRHPYSVILFDEIEKAHPEVFNILLQIL 638
Query: 503 EDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTE 562
EDGRLTDSKG+TV+FKNT++I+TSNVG+S I K +GF DE + Y ++K+ V +
Sbjct: 639 EDGRLTDSKGKTVNFKNTIIILTSNVGASRINKQN-TLGFSRSEDEAEDEYEKMKNNVMQ 697
Query: 563 ELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERV 622
ELK FRPEFLNR+D++IVF L + +KEI +ML EV +RL+ KDI ++ + + +
Sbjct: 698 ELKDNFRPEFLNRIDDIIVFHSLDEENLKEIVKLMLDEVANRLEDKDIYIEFDDETEKFL 757
Query: 623 VEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSD 670
VE+G + +YGARPLRR I R +ED ++E++L IK+ D V V+++
Sbjct: 758 VEKGIDVTYGARPLRRIITRTIEDKLSEEILKGVIKQDDKVYTTVENN 805
>gi|390934090|ref|YP_006391595.1| ATPase [Thermoanaerobacterium saccharolyticum JW/SL-YS485]
gi|389569591|gb|AFK85996.1| ATPase AAA-2 domain protein [Thermoanaerobacterium saccharolyticum
JW/SL-YS485]
Length = 810
Score = 815 bits (2105), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/643 (62%), Positives = 528/643 (82%), Gaps = 7/643 (1%)
Query: 23 PTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEG 82
P L ++G +LT+LA EGKLDPV+GR+ +IERV+QIL RRTKNNPCLIGEPGVGKTAIAEG
Sbjct: 163 PNLNQFGRDLTELAREGKLDPVIGREKEIERVIQILSRRTKNNPCLIGEPGVGKTAIAEG 222
Query: 83 LAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDE 142
LA+ I SG +P+ ++GK+V+TLDM +VAGTKYRGEFE+RLK ++ E+ ++ +ILFIDE
Sbjct: 223 LAEAIESGTIPEILKGKRVVTLDMASMVAGTKYRGEFEDRLKNVLNEVIKAGNVILFIDE 282
Query: 143 VHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVP 202
+HT+IGAGAAEGAIDA+NILKP+LARGE+Q IGATT+DEYRK+IEKDPALERRFQP+ V
Sbjct: 283 LHTIIGAGAAEGAIDASNILKPALARGEIQVIGATTIDEYRKYIEKDPALERRFQPIMVE 342
Query: 203 EPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGS 262
EPSV+ETI+ILKGLR++YE HH+++ TDEA+ +AA+LS++YI+DRFLPDKAIDLIDEA S
Sbjct: 343 EPSVEETIEILKGLRDKYEAHHRIKITDEAIEAAAKLSHRYITDRFLPDKAIDLIDEAAS 402
Query: 263 RVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKG 322
RVRL+ P E +ELE +L + K+K EA+R Q++EKA ++RD E +K Q+ L K
Sbjct: 403 RVRLKTVTAPPEIKELEDKLNMLNKDKEEAIRTQEYEKAAKIRDEEQKVKEQLENLKSKW 462
Query: 323 KEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQD 382
++ S + ++ V +I IVS WTGIP +K++ +ES+RLL +EE LHKRVIGQD
Sbjct: 463 QQNSLVKEKS------VGAEEISQIVSLWTGIPTQKLAQEESERLLHLEEILHKRVIGQD 516
Query: 383 EAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDM 442
EAV A++RAIRRARVGLK+P RPI SFIF GPTGVGK+EL+KALA FG E A++R+DM
Sbjct: 517 EAVDAVARAIRRARVGLKDPKRPIGSFIFLGPTGVGKTELSKALAEAMFGDESAIVRIDM 576
Query: 443 SEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQIL 502
SE+ME+ +VS+LIGSPPGYVGY EGG+LTE +RR+PY+V+LFDEIEKAHPDVFN++LQIL
Sbjct: 577 SEYMEKFSVSRLIGSPPGYVGYEEGGELTEKIRRKPYSVILFDEIEKAHPDVFNILLQIL 636
Query: 503 EDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTE 562
+DGRLTDSKGRTVDFKNTL+IMTSNVG+ +I+K +GF + + + SY ++K + E
Sbjct: 637 DDGRLTDSKGRTVDFKNTLIIMTSNVGAQLIKK-QTTLGFMPESNAEKESYEKMKENILE 695
Query: 563 ELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERV 622
ELK+ FRPEFLNR+D++IVFRQLT+ ++++I D+M+ ++ RLK +I L+ T+ +E +
Sbjct: 696 ELKKSFRPEFLNRIDDIIVFRQLTQDDIRKITDLMIADLNKRLKDNNISLEFTDDAKEEL 755
Query: 623 VEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIV 665
++EGY+ +YGARPLRRAI +++E ++E ML EIK GD ++V
Sbjct: 756 LKEGYDVTYGARPLRRAIQKVVESELSELMLKGEIKSGDKILV 798
>gi|300857273|ref|YP_003782257.1| ATPase [Clostridium ljungdahlii DSM 13528]
gi|300437388|gb|ADK17155.1| predicted ATPase with chaperone activity [Clostridium ljungdahlii
DSM 13528]
Length = 813
Score = 815 bits (2105), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/637 (61%), Positives = 518/637 (81%), Gaps = 8/637 (1%)
Query: 18 SGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKT 77
+G PTL+++G +LT +A+EGKLDPV+GR + +RV++IL RRTKNNPCLIG+PGVGKT
Sbjct: 159 NGEPTPTLDQFGRDLTDMAKEGKLDPVIGRDKETQRVLEILSRRTKNNPCLIGDPGVGKT 218
Query: 78 AIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEII 137
AIAEGLA++I S ++P+ + GK+V+TLD+ ++AG+KYRGEFEERLKK+MEEI++S +I
Sbjct: 219 AIAEGLAEKIVSCNIPELLRGKRVVTLDLSSMIAGSKYRGEFEERLKKVMEEIRKSGNVI 278
Query: 138 LFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQ 197
LFIDE+HT+IGAGAAEGAIDA+NILKP+LARGE+QCIGATT+DEYRK+IEKD ALERRFQ
Sbjct: 279 LFIDEIHTIIGAGAAEGAIDASNILKPALARGEIQCIGATTIDEYRKYIEKDAALERRFQ 338
Query: 198 PVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLI 257
P+ V EP+ +E + ILKGLR++YE HH+++ DEA+ +A LS +YI+DR+LPDKAIDLI
Sbjct: 339 PIIVGEPTKEEAVLILKGLRDKYEAHHRVKIIDEAIDAAVNLSDRYITDRYLPDKAIDLI 398
Query: 258 DEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISA 317
DEA ++VR+++ P + + LE+EL + TKEK +++R QDFEKA LRD+E +LK ++
Sbjct: 399 DEAAAKVRIQNLIAPPDLKNLEEELEKATKEKEDSIRVQDFEKAASLRDKEKELKNKLEG 458
Query: 318 LVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKR 377
L K +K E VG E I +VS WT IPVEK++ ES+RLLK+EE LHKR
Sbjct: 459 LKTNWK--TKKEVSTLTVG----EDQIASVVSQWTNIPVEKLTEKESERLLKLEEILHKR 512
Query: 378 VIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAM 437
V+GQDEAVK+IS+A+RRARVGLK+P RPI SFIF GPTGVGK+EL+KALA FG E M
Sbjct: 513 VVGQDEAVKSISKAVRRARVGLKDPKRPIGSFIFLGPTGVGKTELSKALAEAMFGDENNM 572
Query: 438 IRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNM 497
IR+DMSE+ME+HTVS+LIGSPPGYVGY EGGQLTE VRR PY+VVLFDEIEKAHP+VFN+
Sbjct: 573 IRIDMSEYMEKHTVSRLIGSPPGYVGYDEGGQLTEKVRRNPYSVVLFDEIEKAHPEVFNI 632
Query: 498 MLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDY-DEKDSSYNRI 556
+LQILEDGRLTD KG+T++FKNT++IMTSNVG++ I K + +GF D+K+S Y ++
Sbjct: 633 LLQILEDGRLTDGKGKTINFKNTIIIMTSNVGAATIRK-QKSMGFTAAKGDDKESQYEKM 691
Query: 557 KSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTE 616
K + EELK FRPEFLNR+D++IVF QL + ++K+I +MLK+V RLK ++IE+ T+
Sbjct: 692 KDNIMEELKNSFRPEFLNRIDDIIVFHQLEEEDLKQIVKLMLKDVSSRLKDQEIEIGFTD 751
Query: 617 RFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKML 653
+ +E + +EG++ +YGARPLRRAI + +ED ++E+ML
Sbjct: 752 KAQELLAKEGFDLTYGARPLRRAITKTVEDKLSEEML 788
>gi|134298058|ref|YP_001111554.1| ATPase [Desulfotomaculum reducens MI-1]
gi|134050758|gb|ABO48729.1| ATPase AAA-2 domain protein [Desulfotomaculum reducens MI-1]
Length = 812
Score = 815 bits (2105), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 394/649 (60%), Positives = 526/649 (81%), Gaps = 8/649 (1%)
Query: 17 SSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGK 76
+ G K +L+++ +LT+LA+E KLDPVVGR +IERV+Q+L RRTKNNP LIGEPGVGK
Sbjct: 159 AGGCKTVSLDQFSRDLTRLAKEEKLDPVVGRAKEIERVIQVLSRRTKNNPVLIGEPGVGK 218
Query: 77 TAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEI 136
TAIAEGLAQRI G+VP+ + ++V+TLD+ +VAGTKYRGEFE+RLKK+MEEI+Q+ I
Sbjct: 219 TAIAEGLAQRIIEGNVPEILLNRRVVTLDLAAMVAGTKYRGEFEDRLKKIMEEIRQAGNI 278
Query: 137 ILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRF 196
I+FIDE+HTLIGAGAAEGAIDAANILKP+LARGE+Q IGATTLDEYRK+IEKD ALERRF
Sbjct: 279 IVFIDELHTLIGAGAAEGAIDAANILKPALARGEIQTIGATTLDEYRKYIEKDSALERRF 338
Query: 197 QPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDL 256
QP++V EP+V+ET+QILKG+R++YE HH++ TDEAL +AA+LS +YI+DRFLPDKAIDL
Sbjct: 339 QPIQVDEPTVEETLQILKGIRDKYEAHHRVSITDEALEAAAKLSDRYITDRFLPDKAIDL 398
Query: 257 IDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQIS 316
IDE+ SRVR++ P + ++ EK+L +I KEK A+ Q+FEKA ELRDRE L +I
Sbjct: 399 IDESASRVRIKAFTAPPDLKQKEKDLEEIRKEKESAINNQEFEKAAELRDREQALLTEI- 457
Query: 317 ALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHK 376
++ +E + +T+ G+ VV+E DI HIV++WTG+PV+K++ +ES++LL +EE LH+
Sbjct: 458 ---NQARE-NWNQTKGGN-NLVVSEQDIAHIVASWTGVPVQKIAQEESEKLLNLEEVLHR 512
Query: 377 RVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEA 436
RV+GQD+AVKA+SRA+RRAR GLK+P RP+ SFIF GPTGVGK+ELA+ALA FG E+A
Sbjct: 513 RVVGQDDAVKAVSRAVRRARAGLKDPKRPVGSFIFLGPTGVGKTELARALAESLFGDEDA 572
Query: 437 MIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFN 496
++R+DMSE+ME+H VS+L+G+PPGYVGY EGGQLTEAVRR+PY+VVL DEIEKAHPDVFN
Sbjct: 573 LVRIDMSEYMEKHAVSRLVGAPPGYVGYDEGGQLTEAVRRKPYSVVLLDEIEKAHPDVFN 632
Query: 497 MMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRI 556
++LQ+LEDGRLTDS+GR VDF+NT++IMTSNVG S I+ G ++GF ++ + Y ++
Sbjct: 633 ILLQVLEDGRLTDSRGRVVDFRNTVIIMTSNVGLSTIKSVG-KVGFAATAQDQ-ADYEKM 690
Query: 557 KSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTE 616
K V E LK+ FRPEFLNR+DE IVF LT+ +++I D+ML+EV R++ ++ L TE
Sbjct: 691 KERVEEGLKRTFRPEFLNRIDETIVFHPLTREHIQQIVDLMLQEVAQRMEEHEVYLSFTE 750
Query: 617 RFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIV 665
+E + + GY+ YGARPLRR I R +ED ++E+++ K+G+ V++
Sbjct: 751 GAKEILAQVGYSEEYGARPLRREIQRRVEDHLSEELIKGTFKKGERVVI 799
>gi|302872270|ref|YP_003840906.1| ATPase AAA-2 domain-containing protein [Caldicellulosiruptor
obsidiansis OB47]
gi|302575129|gb|ADL42920.1| ATPase AAA-2 domain protein [Caldicellulosiruptor obsidiansis OB47]
Length = 829
Score = 815 bits (2105), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/653 (61%), Positives = 521/653 (79%), Gaps = 7/653 (1%)
Query: 23 PTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEG 82
PTL ++ +LT+LA EGK+DPV+GR+ +IERV+QIL RRTKNNPCLIGEPGVGKTAI EG
Sbjct: 168 PTLNQFSRDLTQLALEGKIDPVIGREKEIERVIQILSRRTKNNPCLIGEPGVGKTAIVEG 227
Query: 83 LAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDE 142
LAQ+I G+VP+ + K+V+ LD+ +VAG+K+RGEFEERLKK MEE++++ +ILFIDE
Sbjct: 228 LAQKIVEGNVPELLRNKRVVALDLSAMVAGSKFRGEFEERLKKAMEEVRKAGNVILFIDE 287
Query: 143 VHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVP 202
+HT+IGAGAAEGAIDA+NILKP+LARGE+Q IGATTLDEYRKHIEKD ALERRFQP+ V
Sbjct: 288 MHTIIGAGAAEGAIDASNILKPALARGEIQVIGATTLDEYRKHIEKDAALERRFQPILVG 347
Query: 203 EPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGS 262
EP+ +E IQILKGLR++YE HH ++ TDEA+ +A +LS +YI+DR+LPDKAIDLIDEA S
Sbjct: 348 EPTPEEAIQILKGLRDKYEAHHGVKITDEAIKAAVELSTKYITDRYLPDKAIDLIDEAAS 407
Query: 263 RVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKG 322
RVRLR LP +E E+++ ++ KEK EA+R Q++EKA ++RD M L+ ++ + +
Sbjct: 408 RVRLRMYTLPPHVKEFEEKIEKLEKEKEEAIRLQEYEKAAKIRDEIMKLRQELEKIKNSW 467
Query: 323 KEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQD 382
+ P+VTE DI +IVS+WTGIPV K++ DES+RLLK+EE LH+RV+GQD
Sbjct: 468 T------NDQQKTQPIVTEDDIAYIVSSWTGIPVNKLTEDESERLLKLEEVLHRRVVGQD 521
Query: 383 EAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDM 442
EAVKA++RAIRR RVGLK+P RPI SFIF GPTGVGK+ELA+ALA FG+E+AMIR+DM
Sbjct: 522 EAVKAVARAIRRGRVGLKDPKRPIGSFIFLGPTGVGKTELARALAEALFGTEDAMIRIDM 581
Query: 443 SEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQIL 502
SE+ME+ VSKLIGSPPGYVGY EGGQLTE VRRRPY+VVLFDEIEKAHPDVFN++LQIL
Sbjct: 582 SEYMEKFNVSKLIGSPPGYVGYEEGGQLTEKVRRRPYSVVLFDEIEKAHPDVFNLLLQIL 641
Query: 503 EDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTE 562
+DGRLTDS+GRTV F+NT++IMTSN+G+++I +++GF DEK +Y RIK V
Sbjct: 642 DDGRLTDSQGRTVSFRNTVIIMTSNIGANLI-TNPKKLGFSTSEDEKQKTYERIKENVMA 700
Query: 563 ELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERV 622
ELK+ FRPEFLNR+DE+IVF L + +VK+I +IMLK + +R+K + + T E +
Sbjct: 701 ELKKTFRPEFLNRIDEIIVFHPLDEEDVKKIVEIMLKNLQERIKASEYYAEFTPALIEAI 760
Query: 623 VEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTV 675
++G++P +GARPL+RAI ++ED ++E +L +IK+GD IVD + V V
Sbjct: 761 AKKGFDPVFGARPLKRAIQTMVEDKISEAILEGKIKQGDEFIVDFVDENTVIV 813
>gi|260893780|ref|YP_003239877.1| ATPase AAA-2 domain-containing protein [Ammonifex degensii KC4]
gi|260865921|gb|ACX53027.1| ATPase AAA-2 domain protein [Ammonifex degensii KC4]
Length = 812
Score = 815 bits (2105), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/678 (61%), Positives = 541/678 (79%), Gaps = 10/678 (1%)
Query: 5 STEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKN 64
ST GA G + +K P L+++G +LT+LA E +LDPVVGR+ +IERV+QIL RRTKN
Sbjct: 143 STGTPGAAQAGPAGRSKTPLLDQFGRDLTRLAREDRLDPVVGREKEIERVIQILSRRTKN 202
Query: 65 NPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLK 124
NP LIG+PGVGKTAI EGLAQRIA G VP+ + K+V+ LD+ +VAGTKYRGEFEERLK
Sbjct: 203 NPVLIGDPGVGKTAIVEGLAQRIAKGQVPEVLLNKRVVALDLASVVAGTKYRGEFEERLK 262
Query: 125 KLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRK 184
K+++EIK + +ILFIDE+HT++GAGAAEGAIDAANILKP LARGELQ IGATTLDEYRK
Sbjct: 263 KIVDEIKAAGNVILFIDELHTIVGAGAAEGAIDAANILKPVLARGELQTIGATTLDEYRK 322
Query: 185 HIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYI 244
HIE+DPALERRFQPV V EP+V+ETI ILKGLR+RYE HH++R TDEA+ +AA+LS++YI
Sbjct: 323 HIERDPALERRFQPVMVGEPTVEETIAILKGLRDRYEAHHRVRITDEAIEAAAKLSHRYI 382
Query: 245 SDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGEL 304
+DRFLPDKAIDLIDEA SRVRLR P + +ELE++L +I KEK AV Q+FEKA +L
Sbjct: 383 TDRFLPDKAIDLIDEAASRVRLRAFTPPPDLKELEQKLEEIRKEKEAAVAAQEFEKAAQL 442
Query: 305 RDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDES 364
RD+E +KA+I A +E + + G++ VVT D+ +VS+WTGIPV+++ +E+
Sbjct: 443 RDQEAKIKAEIEA----AREAWRQKQSDGEL--VVTAEDVAEVVSSWTGIPVKQLKMEEA 496
Query: 365 DRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAK 424
+RLLK+EE LH+R++GQDEAV A++RA+RRAR GLK+P RPI FIF GPTGVGK+ELAK
Sbjct: 497 ERLLKLEEILHQRIVGQDEAVAAVARAVRRARAGLKDPRRPIGVFIFLGPTGVGKTELAK 556
Query: 425 ALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLF 484
ALA FG EEAM+R+DMSE+MERHTVS+L+G+PPGYVGY EGGQLTEAVRRRPYTVVL
Sbjct: 557 ALAEALFGDEEAMVRIDMSEYMERHTVSRLVGAPPGYVGYEEGGQLTEAVRRRPYTVVLL 616
Query: 485 DEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDL 544
DEIEKAHPDVFN++LQI+EDGRLTD+KGRTVDFKNT++IMTSN+G+ +++ +GF
Sbjct: 617 DEIEKAHPDVFNILLQIMEDGRLTDAKGRTVDFKNTVIIMTSNIGARFLKRES-PLGFRA 675
Query: 545 DYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDR 604
+ DEK +++ +K + +EL++ FRPEFLNR+DE+IVF LT ++ I D+MLK+V R
Sbjct: 676 E-DEK-AAFESMKEKILKELERTFRPEFLNRVDEIIVFHPLTPEHIRAIVDLMLKDVAKR 733
Query: 605 LKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVI 664
LK + +E++ ++ +E + ++GY+ ++GARPLRR I RL+ED ++E+ML +GD V+
Sbjct: 734 LKEQGVEVEFSDALKELLAQKGYDENFGARPLRRTIQRLVEDRLSEEMLKGTFAKGDKVL 793
Query: 665 VDVDSDGNVTVLNGSSGA 682
VD + +G V V GA
Sbjct: 794 VDAE-NGEVVVKREPVGA 810
>gi|407474767|ref|YP_006789167.1| chaperone protein ClpB [Clostridium acidurici 9a]
gi|407051275|gb|AFS79320.1| chaperone protein ClpB [Clostridium acidurici 9a]
Length = 818
Score = 815 bits (2104), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/660 (60%), Positives = 525/660 (79%), Gaps = 11/660 (1%)
Query: 20 NKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAI 79
NK PTL+EYG +LT LA EGK+DPV+GR +IERV+Q+L RRTKNNPCLIGEPGVGKTAI
Sbjct: 162 NKTPTLDEYGRDLTVLANEGKIDPVIGRSKEIERVIQVLSRRTKNNPCLIGEPGVGKTAI 221
Query: 80 AEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILF 139
AEGLAQ+I SG+VP+ ++ K+V+TLD+ +VAG KYRGEFEERLKK+MEE+ ++ +ILF
Sbjct: 222 AEGLAQKIVSGEVPELLKDKRVVTLDLPSMVAGAKYRGEFEERLKKVMEELIETKNVILF 281
Query: 140 IDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPV 199
IDE+HT+IGAGAAEG+IDA+NILKP+LARGELQ IGATT+DEYRK+IEKDPALERRFQPV
Sbjct: 282 IDEMHTIIGAGAAEGSIDASNILKPALARGELQTIGATTIDEYRKYIEKDPALERRFQPV 341
Query: 200 KVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDE 259
V EPSV++TI+IL+GLR+RYE HH++ +DEAL +A +LS +YI+DR+LPDKAIDLIDE
Sbjct: 342 MVEEPSVEDTIKILEGLRDRYEAHHRVNISDEALKAAVELSSRYITDRYLPDKAIDLIDE 401
Query: 260 AGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALV 319
A SR+RL+ P E ELE +L ++ EK EA+ QD+EKA ++RD E +K Q+
Sbjct: 402 AASRIRLKSVTPPPELNELEGKLEELNHEKEEAINTQDYEKAAKIRDEEKSIKEQLEK-- 459
Query: 320 DKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVI 379
++ +T+ VV E DI H+VS WTGIPV+K+S +ES+RLL +EE LHK+VI
Sbjct: 460 ---RQEEWNQTKHTSEKEVVYE-DIAHVVSTWTGIPVKKMSMEESERLLNLEEILHKKVI 515
Query: 380 GQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIR 439
GQD+AVK+++ A+RRARVGLK+PN+PI +FIF GPTGVGK+ L K+LA FG E+A+IR
Sbjct: 516 GQDQAVKSLASAVRRARVGLKDPNKPIGTFIFVGPTGVGKTYLTKSLAEALFGDEDAVIR 575
Query: 440 LDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMML 499
+DMSE+ME+H+VSKL+GSPPGYVGY EGGQLTE VRR+PY+V+LFDE+EKAHP+VFN++L
Sbjct: 576 IDMSEYMEKHSVSKLVGSPPGYVGYDEGGQLTEKVRRKPYSVILFDEVEKAHPEVFNILL 635
Query: 500 QILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSL 559
Q+L+DGRLTDSKGR VDFKNT++I+TSNVG+S I+K +GF ++K K
Sbjct: 636 QLLDDGRLTDSKGRVVDFKNTVIILTSNVGASTIKKQN-TLGFSAPSEDKVEKKEYEKMK 694
Query: 560 --VTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTER 617
+ EELK+ FRPEFLNR+DE IVF L K +K+I +IM+K++ RL+ +I ++VTE+
Sbjct: 695 ENIMEELKRTFRPEFLNRIDETIVFHPLNKDHIKQIVNIMVKDLEKRLEKLNIHIEVTEK 754
Query: 618 FRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTVLN 677
R+ + E+G++P YGARPL RAI L+E+ ++E+ML I + DS V++D DG V N
Sbjct: 755 ARDYIGEKGFDPDYGARPLERAIRNLVENELSEEMLRGNISKDDS--VEIDFDGEKLVFN 812
>gi|344996728|ref|YP_004799071.1| ATPase AAA-2 domain-containing protein [Caldicellulosiruptor
lactoaceticus 6A]
gi|343964947|gb|AEM74094.1| ATPase AAA-2 domain protein [Caldicellulosiruptor lactoaceticus 6A]
Length = 829
Score = 815 bits (2104), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/663 (60%), Positives = 524/663 (79%), Gaps = 8/663 (1%)
Query: 23 PTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEG 82
PTL ++ +LT+LA EGK+DPV+GR+ +IERV+QIL RRTKNNPCLIGEPGVGKTAI EG
Sbjct: 168 PTLNQFSRDLTQLALEGKIDPVIGREKEIERVIQILSRRTKNNPCLIGEPGVGKTAIVEG 227
Query: 83 LAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDE 142
LAQ+I G+VP+ + K+V+ LD+ +VAG+K+RGEFEERLKK MEE++++ +ILFIDE
Sbjct: 228 LAQKIVEGNVPELLRNKRVVALDLSAMVAGSKFRGEFEERLKKAMEEVRKAGNVILFIDE 287
Query: 143 VHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVP 202
+HT+IGAGAAEGAIDA+NILKP+LARGE+Q IGATTLDEYRKHIEKD ALERRFQP+ V
Sbjct: 288 MHTIIGAGAAEGAIDASNILKPALARGEIQVIGATTLDEYRKHIEKDAALERRFQPILVG 347
Query: 203 EPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGS 262
EP+ +E IQILKGLR++YE HH ++ TDEA+ +A +LS +YI+DR+LPDKAIDLIDEA S
Sbjct: 348 EPTPEEAIQILKGLRDKYEAHHGVKITDEAIKAAVELSTKYITDRYLPDKAIDLIDEAAS 407
Query: 263 RVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKG 322
RVRLR LP +E E+++ ++ KEK EA+R Q++EKA ++RD M L+ D
Sbjct: 408 RVRLRMYTLPPHVKEFEEKIEKLEKEKEEAIRLQEYEKAAKIRDEIMKLRQ------DLE 461
Query: 323 KEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQD 382
K + + P+VTE DI +IVS+WTGIPV +++ DES+RLLK+EE LH+RV+GQD
Sbjct: 462 KIKNSWTNDQQKTQPIVTEDDIAYIVSSWTGIPVNRLTEDESERLLKLEEVLHRRVVGQD 521
Query: 383 EAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDM 442
EAVKA++RAIRR RVGLK+P RPI SFIF GPTGVGK+ELA+ALA FG+E+AMIR+DM
Sbjct: 522 EAVKAVARAIRRGRVGLKDPKRPIGSFIFLGPTGVGKTELARALAEALFGTEDAMIRIDM 581
Query: 443 SEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQIL 502
SE+ME+ VSKLIGSPPGYVGY EGGQLTE VRRRPY+VVLFDEIEKAHPDVFN++LQIL
Sbjct: 582 SEYMEKFNVSKLIGSPPGYVGYEEGGQLTEKVRRRPYSVVLFDEIEKAHPDVFNLLLQIL 641
Query: 503 EDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTE 562
+DGRLTDS+GRTV F+NT++IMTSN+G+++I +++GF DEK +Y RIK V
Sbjct: 642 DDGRLTDSQGRTVSFRNTVIIMTSNIGANLI-TNPKKLGFSTSEDEKQRTYERIKENVMT 700
Query: 563 ELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERV 622
ELK+ FRPEFLNR+DE+IVF L + +VK+I +IMLK + +R+K + + T E +
Sbjct: 701 ELKKTFRPEFLNRIDEIIVFHPLDEEDVKKIVEIMLKNLQERIKASEYYAEFTTSLVEAI 760
Query: 623 VEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNGSSGA 682
++G++P +GARPL+RAI ++ED ++E +L +IK+GD IVD DGN ++ +
Sbjct: 761 AKKGFDPVFGARPLKRAIQSMVEDKISEAILEGKIKQGDEFIVDY-VDGNTVIIKKEKAS 819
Query: 683 PES 685
S
Sbjct: 820 TSS 822
>gi|312135577|ref|YP_004002915.1| ATPase AAA-2 domain-containing protein [Caldicellulosiruptor
owensensis OL]
gi|311775628|gb|ADQ05115.1| ATPase AAA-2 domain protein [Caldicellulosiruptor owensensis OL]
Length = 829
Score = 814 bits (2103), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/663 (60%), Positives = 525/663 (79%), Gaps = 8/663 (1%)
Query: 23 PTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEG 82
PTL ++ +LT+LA EGK+DPV+GR+ +IERV+QIL RRTKNNPCLIGEPGVGKTAI EG
Sbjct: 168 PTLNQFSRDLTQLALEGKIDPVIGREKEIERVIQILSRRTKNNPCLIGEPGVGKTAIVEG 227
Query: 83 LAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDE 142
LAQ+I G+VP+ + K+V+ LD+ +VAG+K+RGEFEERLKK MEE++++ +ILFIDE
Sbjct: 228 LAQKIVEGNVPELLRNKRVVALDLSAMVAGSKFRGEFEERLKKAMEEVRKAGNVILFIDE 287
Query: 143 VHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVP 202
+HT+IGAGAAEGAIDA+NILKP+LARGE+Q IGATTLDEYRKHIEKD ALERRFQP+ V
Sbjct: 288 MHTIIGAGAAEGAIDASNILKPALARGEIQVIGATTLDEYRKHIEKDAALERRFQPILVG 347
Query: 203 EPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGS 262
EP+ +E IQILKGLR++YE HH ++ TDEA+ +A +LS +YI+DR+LPDKAIDLIDEA S
Sbjct: 348 EPTPEEAIQILKGLRDKYEAHHGVKITDEAIKAAVELSTKYITDRYLPDKAIDLIDEAAS 407
Query: 263 RVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKG 322
RVRLR LP +E E+++ ++ KEK EA+R Q++EKA ++RD M L+ ++ + +
Sbjct: 408 RVRLRMYTLPPHVKEFEEKIEKLEKEKEEAIRLQEYEKAAKIRDEIMKLRQELEKIKNSW 467
Query: 323 KEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQD 382
+ P+VTE DI +IVS+WTGIPV K++ DES+RLLK+EE LH+RV+GQD
Sbjct: 468 T------NDQQKTQPIVTEDDIAYIVSSWTGIPVNKLTEDESERLLKLEEVLHRRVVGQD 521
Query: 383 EAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDM 442
EAVKA++RAIRR RVGLK+P RPI SFIF GPTGVGK+ELA+ALA FG+E+A+IR+DM
Sbjct: 522 EAVKAVARAIRRGRVGLKDPKRPIGSFIFLGPTGVGKTELARALAEALFGTEDALIRIDM 581
Query: 443 SEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQIL 502
SE+ME+ VSKLIGSPPGYVGY EGGQLTE VRRRPY+VVLFDEIEKAHPDVFN++LQIL
Sbjct: 582 SEYMEKFNVSKLIGSPPGYVGYEEGGQLTEKVRRRPYSVVLFDEIEKAHPDVFNLLLQIL 641
Query: 503 EDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTE 562
+DGRLTDS+GRTV F+NT++IMTSN+G+++I +++GF DEK +Y RIK V
Sbjct: 642 DDGRLTDSQGRTVSFRNTVIIMTSNIGANLI-TNPKKLGFSTSEDEKQKTYERIKENVMN 700
Query: 563 ELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERV 622
ELK+ FRPEFLNR+DE+IVF L + +VK+I +IMLK + +R+K + + T E +
Sbjct: 701 ELKKTFRPEFLNRIDEIIVFHPLDEEDVKKIVEIMLKNLQERIKASEYYAEFTPALVEAI 760
Query: 623 VEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNGSSGA 682
++G++P +GARPL+RAI ++ED ++E +L +IK+GD IVD +GN ++ +
Sbjct: 761 AKKGFDPVFGARPLKRAIQSMVEDKISEAILEGKIKQGDEFIVDF-VEGNTVIIKKEKAS 819
Query: 683 PES 685
S
Sbjct: 820 TSS 822
>gi|312127146|ref|YP_003992020.1| ATPase AAA-2 domain-containing protein [Caldicellulosiruptor
hydrothermalis 108]
gi|311777165|gb|ADQ06651.1| ATPase AAA-2 domain protein [Caldicellulosiruptor hydrothermalis
108]
Length = 829
Score = 814 bits (2102), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/663 (60%), Positives = 525/663 (79%), Gaps = 8/663 (1%)
Query: 23 PTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEG 82
PTL ++ +LT+LA EGK+DPV+GR+ +IERV+QIL RRTKNNPCLIGEPGVGKTAI EG
Sbjct: 168 PTLNQFSRDLTQLALEGKIDPVIGREKEIERVIQILSRRTKNNPCLIGEPGVGKTAIVEG 227
Query: 83 LAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDE 142
LAQ+I G+VP+ + K+V+ LD+ +VAG+K+RGEFEERLKK MEE++++ +ILFIDE
Sbjct: 228 LAQKIVEGNVPELLRNKRVVALDLSAMVAGSKFRGEFEERLKKAMEEVRKAGNVILFIDE 287
Query: 143 VHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVP 202
+HT+IGAGAAEGAIDA+NILKP+LARGE+Q IGATTLDEYRKHIEKD ALERRFQP+ V
Sbjct: 288 MHTIIGAGAAEGAIDASNILKPALARGEIQVIGATTLDEYRKHIEKDAALERRFQPILVG 347
Query: 203 EPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGS 262
EP+ +E IQILKGLR++YE HH ++ TDEA+ +A +LS +YI+DR+LPDKAIDLIDEA S
Sbjct: 348 EPTPEEAIQILKGLRDKYEAHHGVKITDEAIKAAVELSTKYITDRYLPDKAIDLIDEAAS 407
Query: 263 RVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKG 322
RVRLR LP +E E+++ ++ KEK EA+R Q++EKA ++RD M L+ ++ + +
Sbjct: 408 RVRLRMYTLPPHVKEFEEKIEKLEKEKEEAIRLQEYEKAAKIRDEIMKLRQELEKIKNSW 467
Query: 323 KEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQD 382
+ P+VTE DI +IVS+WTGIPV K++ DES+RLLK+EE LH+RV+GQD
Sbjct: 468 T------NDQQKTQPIVTEDDIAYIVSSWTGIPVNKLTEDESERLLKLEEVLHRRVVGQD 521
Query: 383 EAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDM 442
EAVKA++RAIRR RVGLK+P RPI SFIF GPTGVGK+ELA+ALA FG+E+AMIR+DM
Sbjct: 522 EAVKAVARAIRRGRVGLKDPKRPIGSFIFLGPTGVGKTELARALAEALFGTEDAMIRIDM 581
Query: 443 SEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQIL 502
SE+ME+ VSKLIGSPPGYVGY EGGQLTE VRRRPY+VVLFDEIEKAHPDVFN++LQIL
Sbjct: 582 SEYMEKFNVSKLIGSPPGYVGYEEGGQLTEKVRRRPYSVVLFDEIEKAHPDVFNLLLQIL 641
Query: 503 EDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTE 562
+DGRLTDS+GRTV F+NT++IMTSN+G+++I +++GF DEK +Y +IK V
Sbjct: 642 DDGRLTDSQGRTVSFRNTVIIMTSNIGANLI-TNPKKLGFSTSEDEKQRTYEQIKENVMG 700
Query: 563 ELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERV 622
ELK+ FRPEFLNR+DE+IVF L + +VK+I +IMLK + +R+K + + T E +
Sbjct: 701 ELKKTFRPEFLNRIDEIIVFHPLDEDDVKKIVEIMLKNLQERIKASEYYAEFTTSLVEAI 760
Query: 623 VEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNGSSGA 682
++G++P +GARPL+RAI ++ED ++E +L +IK+GD IVD DGN ++ +
Sbjct: 761 AKKGFDPVFGARPLKRAIQSMVEDKISEAILEGKIKQGDEFIVDY-VDGNTVIVKKEKAS 819
Query: 683 PES 685
S
Sbjct: 820 TSS 822
>gi|357012846|ref|ZP_09077845.1| ClpC [Paenibacillus elgii B69]
Length = 814
Score = 813 bits (2100), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/671 (59%), Positives = 522/671 (77%), Gaps = 10/671 (1%)
Query: 5 STEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKN 64
S+E V G ++ N PTL+ +LT A+EG LDPV+GR +IERV+Q+L RRTKN
Sbjct: 144 SSEVVSPNHGNPTNVN-TPTLDGLARDLTAYAKEGNLDPVIGRSKEIERVIQVLSRRTKN 202
Query: 65 NPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLK 124
NP LIGEPGVGKTAIAEGLAQ+I + ++P+T+ K+V+TLDMG +VAGTKYRGEFE+RLK
Sbjct: 203 NPVLIGEPGVGKTAIAEGLAQKIVANEIPETLRDKRVMTLDMGSVVAGTKYRGEFEDRLK 262
Query: 125 KLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRK 184
K+M+EI+Q+ I+LFIDE+HTLIGAG AEGAIDA+NILKP+LARGELQCIGATTLDEYRK
Sbjct: 263 KIMDEIRQAGNIVLFIDELHTLIGAGGAEGAIDASNILKPALARGELQCIGATTLDEYRK 322
Query: 185 HIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYI 244
+IEKD ALERRFQP+ V +PS +E IQIL GLR+RYE HH+++ TDEA+ A +LS +YI
Sbjct: 323 YIEKDAALERRFQPITVDQPSPEEAIQILHGLRDRYEAHHRVKITDEAIEQAVKLSDRYI 382
Query: 245 SDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGEL 304
+DRFLPDKAIDLIDEA S+VRLR +P + ++LE L I KEK+ AV+ Q+FEKA L
Sbjct: 383 TDRFLPDKAIDLIDEASSKVRLRSYTVPPDLKKLESRLDDIRKEKDAAVQSQEFEKAASL 442
Query: 305 RDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDES 364
RD E L+ ++ + ++ KE + G VT DI +V++WTGIPV K++ +E+
Sbjct: 443 RDTEQKLREELDSTKNEWKE------KQGRTDSEVTPDDIAQVVASWTGIPVVKLAEEET 496
Query: 365 DRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAK 424
RLLKME+ LH RVIGQDEAVKA+SRAIRRAR GLK+P RP+ SFIF GPTGVGK+ELA+
Sbjct: 497 QRLLKMEDILHDRVIGQDEAVKAVSRAIRRARAGLKDPKRPMGSFIFLGPTGVGKTELAR 556
Query: 425 ALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLF 484
ALA FG E A+IR+DMSE+ME+H+ S+L+G+PPGYVGY EGGQLTE VRR+PY+VVL
Sbjct: 557 ALAESLFGDENAVIRIDMSEYMEKHSTSRLVGAPPGYVGYEEGGQLTEKVRRKPYSVVLL 616
Query: 485 DEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDL 544
DEIEKAHP+VFN++LQ+LEDGRLTDSKGRTVDF+NTL+IMTSNVG+ I++ +GF
Sbjct: 617 DEIEKAHPEVFNILLQVLEDGRLTDSKGRTVDFRNTLIIMTSNVGADTIKRNS-TLGFTA 675
Query: 545 DYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDR 604
+D YN +K V ELK+ FRPEFLNR+DE+IVF L + + EI +M +E+ R
Sbjct: 676 AHD-AGKDYNNMKEKVMGELKKSFRPEFLNRIDEIIVFHSLEEQHIAEIVTLMAEELRKR 734
Query: 605 LKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVI 664
LK +++E +T+ + + +EGY+P++GARPLRRAI + +ED ++E++L I +GDS+
Sbjct: 735 LKEQEVEFFLTDSAKAFLAKEGYDPAFGARPLRRAIQKHIEDRLSEELLRGNISKGDSLT 794
Query: 665 VDVDSDGNVTV 675
+D + DG + V
Sbjct: 795 ID-EKDGELIV 804
>gi|304315908|ref|YP_003851053.1| ATPase AAA [Thermoanaerobacterium thermosaccharolyticum DSM 571]
gi|302777410|gb|ADL67969.1| ATPase AAA-2 domain protein [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 810
Score = 813 bits (2100), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/662 (60%), Positives = 535/662 (80%), Gaps = 8/662 (1%)
Query: 5 STEAVGAGVGGGSSGN-KMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTK 63
S E GA + N P L ++G +LT LA EGKLDPV+GR+ +IERV+QIL RRTK
Sbjct: 144 SEEPSGAANKAQRAKNTNTPNLNQFGRDLTDLAREGKLDPVIGREKEIERVIQILSRRTK 203
Query: 64 NNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERL 123
NNPCLIGEPGVGKTAIAEGLA+ I SG +P+ ++GK+V+TLDM +VAGTKYRGEFE+RL
Sbjct: 204 NNPCLIGEPGVGKTAIAEGLAEAIESGTIPEILKGKRVVTLDMASMVAGTKYRGEFEDRL 263
Query: 124 KKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYR 183
K ++ E+ ++ +ILFIDE+HT+IGAGAAEGAIDA+NILKP+LARGE+Q IGATT+DEYR
Sbjct: 264 KNVLNEVIKAGNVILFIDELHTIIGAGAAEGAIDASNILKPALARGEIQVIGATTIDEYR 323
Query: 184 KHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQY 243
K+IEKDPALERRFQP+ V EPSV+ETI+ILKGLR++YE HH+++ TDEA+ +AA+LS++Y
Sbjct: 324 KYIEKDPALERRFQPIMVEEPSVEETIEILKGLRDKYEAHHRVKITDEAIEAAAKLSHRY 383
Query: 244 ISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGE 303
I+DR+LPDKAIDLIDEA SRVRL+ P E +ELE++L + K+K EA+R Q++EKA +
Sbjct: 384 ITDRYLPDKAIDLIDEAASRVRLKTVTAPPEIKELEEKLNMLNKDKEEAIRTQEYEKAAK 443
Query: 304 LRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDE 363
+RD E +K Q+ L K ++ S + ++ V +I IVS WTGIP +K++ +E
Sbjct: 444 IRDEEQKIKEQLENLKSKWQQNSLVKDKS------VGAEEISQIVSLWTGIPTQKLAQEE 497
Query: 364 SDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELA 423
S+RLL +EE LHKRVIGQDEAV A++RAIRRARVGLK+P RPI SFIF GPTGVGK+EL+
Sbjct: 498 SERLLHLEEILHKRVIGQDEAVDAVARAIRRARVGLKDPRRPIGSFIFLGPTGVGKTELS 557
Query: 424 KALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVL 483
KALA FG E A++R+DMSE+ME+ +VS+LIGSPPGYVGY EGG+LTE +RR+PY+V+L
Sbjct: 558 KALAEAMFGDESAIVRIDMSEYMEKFSVSRLIGSPPGYVGYEEGGELTEKIRRKPYSVIL 617
Query: 484 FDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFD 543
FDEIEKAHPDVFN++LQIL+DGRLTDSKGRTVDFKNTL+IMTSNVG+ +I+K +GF
Sbjct: 618 FDEIEKAHPDVFNILLQILDDGRLTDSKGRTVDFKNTLIIMTSNVGAQLIKK-QTTLGFM 676
Query: 544 LDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFD 603
+ +E +SY ++K + +ELK+ FRPEFLNR+D++IVFRQLT+ ++++I D+M+ ++
Sbjct: 677 PEGEENKASYEKMKENILDELKKSFRPEFLNRIDDIIVFRQLTQDDIRKITDLMIADLNK 736
Query: 604 RLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSV 663
RLK +I L+ T+ +E +++EGY+ +YGARPLRRAI +++E ++E ML E+K GD +
Sbjct: 737 RLKDNNISLEFTDDAKEELLKEGYDVTYGARPLRRAIQKVVESELSELMLKGEVKSGDKI 796
Query: 664 IV 665
+V
Sbjct: 797 LV 798
>gi|414153535|ref|ZP_11409858.1| Negative regulator of genetic competence ClpC/MecB
[Desulfotomaculum hydrothermale Lam5 = DSM 18033]
gi|411454933|emb|CCO07762.1| Negative regulator of genetic competence ClpC/MecB
[Desulfotomaculum hydrothermale Lam5 = DSM 18033]
Length = 814
Score = 813 bits (2099), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/668 (61%), Positives = 537/668 (80%), Gaps = 7/668 (1%)
Query: 3 GESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRT 62
G A G G G + G K +L+++ +LT+LA E KLDPVVGR +IERV+Q+L RRT
Sbjct: 147 GGHQSAGGHGQGCPAGGCKTVSLDQFSRDLTRLAGEDKLDPVVGRSKEIERVIQVLSRRT 206
Query: 63 KNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEER 122
KNNP LIGEPGVGKTAIAEGLAQRI SG+VP+ + ++V+TLD+ +VAGTKYRGEFE+R
Sbjct: 207 KNNPVLIGEPGVGKTAIAEGLAQRIVSGNVPEILLNRRVVTLDLAGMVAGTKYRGEFEDR 266
Query: 123 LKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEY 182
LKK+MEEIKQ+ II+FIDE+HTLIGAGAAEGAIDAANILKP+LARGE+Q IGATTLDEY
Sbjct: 267 LKKIMEEIKQAGNIIVFIDELHTLIGAGAAEGAIDAANILKPALARGEIQTIGATTLDEY 326
Query: 183 RKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQ 242
RK+IEKDPALERRFQP++V EP+V+ET++ILKG+R++YE HHK+R TDEAL +AA+LS +
Sbjct: 327 RKYIEKDPALERRFQPIQVDEPTVEETVEILKGIRDKYEAHHKVRITDEALTAAAKLSDR 386
Query: 243 YISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAG 302
YI+DRFLPDKAIDLIDEA SRVR++ +P + ++ EK L +I KEK A+ Q+FEKA
Sbjct: 387 YITDRFLPDKAIDLIDEAASRVRIKALTMPPDLKDKEKLLEEIRKEKEAAINNQEFEKAA 446
Query: 303 ELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTD 362
ELRDRE + A++ ++ KE + ++++GD VV+E DI HIV++WTG+PV+K++ +
Sbjct: 447 ELRDREHAILAEL----NQAKE-NWHQSKSGD-NLVVSEEDIAHIVASWTGVPVKKLAQE 500
Query: 363 ESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSEL 422
ES+RLL +EE LH+RV+GQ+EAVKA++RA+RRAR GLK+P RP+ SFIF GPTGVGK+EL
Sbjct: 501 ESERLLNLEEVLHRRVVGQNEAVKAVARAVRRARAGLKDPKRPVGSFIFLGPTGVGKTEL 560
Query: 423 AKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVV 482
A+ALA FG EEAM+R+DMSE+ME+H VS+L+G+PPGYVGY EGGQLTEAVRR+PY+VV
Sbjct: 561 ARALAEALFGDEEAMVRIDMSEYMEKHAVSRLVGAPPGYVGYDEGGQLTEAVRRKPYSVV 620
Query: 483 LFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGF 542
L DEIEKAHPDVFN++LQ+LEDGRLTD++GR VDF+N ++IMTSNVG S ++ G R+GF
Sbjct: 621 LLDEIEKAHPDVFNILLQVLEDGRLTDTRGRLVDFRNAVIIMTSNVGVSGLKTVG-RVGF 679
Query: 543 DLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVF 602
+ DE + Y ++K E LK+ FRPEFLNR+DE+IVF LT+ +KEI +ML+EV
Sbjct: 680 APNTDEAKAEYEKMKERSEEALKRTFRPEFLNRIDEIIVFHSLTREHIKEIVSLMLQEVA 739
Query: 603 DRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDS 662
+R+ ++ L TE ++++ GY+ YGARPLRR I R +ED ++E+++ +GD
Sbjct: 740 ERMAEHEVFLTFTEAAKDKLAALGYSEEYGARPLRREIQRRVEDRLSEELIKGTFNKGDK 799
Query: 663 VIVDVDSD 670
V+VDV ++
Sbjct: 800 VLVDVQNE 807
>gi|417907371|ref|ZP_12551144.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
capitis VCU116]
gi|341596264|gb|EGS38880.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
capitis VCU116]
Length = 817
Score = 813 bits (2099), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 388/655 (59%), Positives = 513/655 (78%), Gaps = 9/655 (1%)
Query: 16 GSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVG 75
+ N PTL+ +LT +A++G LDPVVGR +I RV+++L RRTKNNP LIGEPGVG
Sbjct: 154 ANKSNNTPTLDSLARDLTVIAKDGTLDPVVGRDKEITRVIEVLSRRTKNNPVLIGEPGVG 213
Query: 76 KTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDE 135
KTAIAEGLAQ I + +VP+T++ K+V++LDMG +VAGTKYRGEFEERLKK+MEEI Q+
Sbjct: 214 KTAIAEGLAQAIVNNEVPETLKDKRVMSLDMGTVVAGTKYRGEFEERLKKVMEEIHQAGN 273
Query: 136 IILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERR 195
+ILFIDE+HTL+GAG AEGAIDA+NILKP+LARGELQCIGATTLDEYRK+IEKD ALERR
Sbjct: 274 VILFIDELHTLVGAGGAEGAIDASNILKPALARGELQCIGATTLDEYRKNIEKDAALERR 333
Query: 196 FQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAID 255
FQPV+V EP+V++TI+ILKGLR+RYE HH++ +DEAL +AA+LS +Y+SDRFLPDKAID
Sbjct: 334 FQPVQVDEPTVEDTIEILKGLRDRYEAHHRINISDEALEAAAKLSNRYVSDRFLPDKAID 393
Query: 256 LIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQI 315
LIDEA S+VRL+ P +E+E+E+ + EK+ AV Q+FE A LRD++ L+ Q
Sbjct: 394 LIDEASSKVRLKSHTTPNNLKEIEQEIENVKNEKDAAVHAQEFENAANLRDKQSKLEKQY 453
Query: 316 SALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLH 375
++ K G V ++E DI +++ WTGIP+ K++ ESDRLL +E+TLH
Sbjct: 454 EEAKNEWK------NSQGGVSTALSEEDIAEVIAGWTGIPLTKINETESDRLLNLEDTLH 507
Query: 376 KRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEE 435
RVIGQ++AV +IS+A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+ALA FG ++
Sbjct: 508 NRVIGQNDAVNSISKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGEDD 567
Query: 436 AMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVF 495
AMIR+DMSEFME+H VS+L+G+PPGYVG+ +GGQLTE VRR+PY+V+LFDEIEKAHPDVF
Sbjct: 568 AMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKVRRKPYSVILFDEIEKAHPDVF 627
Query: 496 NMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNR 555
N++LQ+L+DG LTD+KGRTVDF+NT++IMTSNVG+ ++ R GF + D Y
Sbjct: 628 NILLQVLDDGHLTDTKGRTVDFRNTVIIMTSNVGAQELQD-QRFAGFGGASEGND--YET 684
Query: 556 IKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVT 615
I+ + +ELK FRPEFLNR+D++IVF +L+K E+KEI +M+K++ DRL ++I + VT
Sbjct: 685 IRKTMMKELKNSFRPEFLNRVDDIIVFHKLSKEELKEIVTMMVKKLTDRLSEQNINISVT 744
Query: 616 ERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSD 670
++ +E++ EEGY+P YGARPL RAI + +ED+++E +L EG V +D D D
Sbjct: 745 DKAKEKIAEEGYDPEYGARPLIRAIQKTVEDNLSELILDGNQIEGKEVTIDHDGD 799
>gi|440753865|ref|ZP_20933067.1| clp amino terminal domain protein [Microcystis aeruginosa TAIHU98]
gi|440174071|gb|ELP53440.1| clp amino terminal domain protein [Microcystis aeruginosa TAIHU98]
Length = 795
Score = 813 bits (2099), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/651 (60%), Positives = 501/651 (76%), Gaps = 45/651 (6%)
Query: 25 LEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLA 84
L +YG NL++ + GK+DPV+GR+P+IERVVQILGRRTK+NP L+G PGVGKTAIAEGLA
Sbjct: 169 LAQYGRNLSQEVKNGKIDPVIGREPEIERVVQILGRRTKSNPILLGAPGVGKTAIAEGLA 228
Query: 85 QRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVH 144
QRI SGD+P+ ++ K+VI LDMG L+AGT++RG+FEERLK ++EE+++S IILFIDE+H
Sbjct: 229 QRIHSGDIPELLQDKQVIALDMGSLLAGTRFRGDFEERLKGVVEEVRKSGSIILFIDEIH 288
Query: 145 TLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEP 204
TL+GAG+ GA+DA+N+LKP+LARGELQC+GATTLDEY++HIE+D ALERRFQPV V EP
Sbjct: 289 TLVGAGSMGGAMDASNLLKPALARGELQCLGATTLDEYKQHIERDAALERRFQPVMVGEP 348
Query: 205 SVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRV 264
+ ++ I+IL+GL+ YE H+++Y +A+ +A LS +YI+DRFLPDKAIDL+DEAGSR
Sbjct: 349 TKEQAIEILRGLKATYEDFHQVKYAQKAIEAAVHLSSRYINDRFLPDKAIDLLDEAGSRT 408
Query: 265 RLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKE 324
LR++ + E+ +E I E +L+
Sbjct: 409 HLRYSLQSKSPAEVSEESPLINPE----------------------------SLI----- 435
Query: 325 MSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEA 384
PVV +I IV+AWTGIPV +++ ES+ LL +E LH+R+IGQ EA
Sbjct: 436 ------------PVVDAEEIAQIVAAWTGIPVTQLTETESESLLNLEYQLHERIIGQQEA 483
Query: 385 VKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSE 444
V A+SRAIRRARV LKNPNRPIASFIF+GPTGVGK+EL KALA FGSE +MIRLDMSE
Sbjct: 484 VNAVSRAIRRARVNLKNPNRPIASFIFAGPTGVGKTELTKALAKLLFGSESSMIRLDMSE 543
Query: 445 FMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILED 504
FME HTVSKLIG+PPGY+GY EGGQLTEAVRR+PY VVLFDEIEKAHPDVFN++LQ+LED
Sbjct: 544 FMESHTVSKLIGAPPGYIGYNEGGQLTEAVRRQPYRVVLFDEIEKAHPDVFNLLLQLLED 603
Query: 505 GRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEEL 564
GRLTDS+GR VDFKNTL+IMTSN+GS VIEKGG +GF++ D S Y +I + VTEEL
Sbjct: 604 GRLTDSQGRRVDFKNTLIIMTSNIGSKVIEKGGNSLGFEMADDFAQSRYQQISNRVTEEL 663
Query: 565 KQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVE 624
KQYFRPEFLNRLDE+IVFRQLT+ EV +IADI++ ++ +L K I +QVT F++ V+
Sbjct: 664 KQYFRPEFLNRLDEIIVFRQLTREEVTQIADILIADLAKQLTEKGISVQVTAAFKDLVIN 723
Query: 625 EGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTV 675
EGY+PSYGARPLRRA+ R LEDS+AE ML+ ++ GD I+DV +DG VTV
Sbjct: 724 EGYDPSYGARPLRRALTRRLEDSLAEAMLSGKVNSGDHAILDVTADGVVTV 774
>gi|317126827|ref|YP_004093109.1| ATPase AAA [Bacillus cellulosilyticus DSM 2522]
gi|315471775|gb|ADU28378.1| ATPase AAA-2 domain protein [Bacillus cellulosilyticus DSM 2522]
Length = 816
Score = 812 bits (2098), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/672 (59%), Positives = 517/672 (76%), Gaps = 10/672 (1%)
Query: 4 ESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTK 63
EST G G S PTL+ +LT +A+E ++DPV+GR +IERV+Q+L RRTK
Sbjct: 146 ESTNNQQQGASGAGSNVNTPTLDSLARDLTAIAKEEQIDPVIGRAKEIERVIQVLSRRTK 205
Query: 64 NNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERL 123
NNP LIGEPGVGKTAIAEGLAQ+I + +VP+T+ K+V+TLDMG +VAGTKYRGEFE+RL
Sbjct: 206 NNPVLIGEPGVGKTAIAEGLAQQIVNNEVPETLRNKRVMTLDMGTVVAGTKYRGEFEDRL 265
Query: 124 KKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYR 183
KK+MEEI+Q+ +ILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTLDEYR
Sbjct: 266 KKVMEEIRQAGNVILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEYR 325
Query: 184 KHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQY 243
K+IEKD ALERRFQP++V EP+ DE+IQILKGLR+RYE HH++ TD+A+ +A +LS +Y
Sbjct: 326 KYIEKDAALERRFQPIQVDEPTNDESIQILKGLRDRYEAHHRVEITDDAIEAAVKLSDRY 385
Query: 244 ISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGE 303
ISDRFLPDKAIDLIDEA S+VRLR P +E+E++L + KEK+ AV+ Q+FEKA
Sbjct: 386 ISDRFLPDKAIDLIDEAASKVRLRSYTAPPNLKEMEQKLEETRKEKDAAVQSQEFEKAAS 445
Query: 304 LRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDE 363
LRD E ++ ++ + + KE + G VT DI +VS+WTGIPV K++ +E
Sbjct: 446 LRDNEQRVREELETMKKEWKE------KQGQENSEVTTEDIALVVSSWTGIPVSKLAEEE 499
Query: 364 SDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELA 423
++RLLKMEE LH RVIGQ+EAV A+S+A+RRAR GLK+P RPI SFIF GPTGVGK+ELA
Sbjct: 500 TERLLKMEEILHNRVIGQEEAVTAVSKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELA 559
Query: 424 KALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVL 483
+A+A FG E+A+IR+DMSE+ME+H S+L+GSPPGYVG+ EGGQLTE VRR+PY+V+L
Sbjct: 560 RAVAESLFGDEDAIIRIDMSEYMEKHNTSRLVGSPPGYVGHEEGGQLTEKVRRKPYSVIL 619
Query: 484 FDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFD 543
DEIEKAHP+VFN++LQ+LEDG LTDSKGR VDF+NT +IMTSNVG+S + + + +GF
Sbjct: 620 LDEIEKAHPEVFNILLQVLEDGFLTDSKGRRVDFRNTAIIMTSNVGASTLRQ-SKSLGFT 678
Query: 544 LDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFD 603
D ++ Y +K V ELK+ FRPEFLNR+DE+IVF L K +K+I +M ++
Sbjct: 679 AQLDGQE--YKDMKGKVMSELKKAFRPEFLNRIDELIVFHSLEKEHIKKIVSLMANQLTK 736
Query: 604 RLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSV 663
RL + IE +++E ++ +EG++P YGARPLRRA+ + +ED ++E++L I +G V
Sbjct: 737 RLSEQGIEFELSEEAMAKIADEGFDPEYGARPLRRALQKQVEDRLSEELLRGNIAKGQHV 796
Query: 664 IVDVDSDGNVTV 675
+DV DG TV
Sbjct: 797 KMDV-KDGEYTV 807
>gi|374709167|ref|ZP_09713601.1| class III stress response-related ATPase [Sporolactobacillus
inulinus CASD]
Length = 816
Score = 812 bits (2098), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/675 (58%), Positives = 520/675 (77%), Gaps = 10/675 (1%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
++G G+ G +S PTL+ +LT +A +G LDPV+GR +IERV+++L R
Sbjct: 141 LLGSHEANSGSAQGRNASHASTPTLDSLARDLTAMASDGSLDPVIGRSKEIERVIEVLSR 200
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNP LIGEPGVGKTA+AEGLAQ I + +VP+ + K+V+TLDMG +VAGTKYRGEFE
Sbjct: 201 RTKNNPVLIGEPGVGKTAVAEGLAQEIVNNEVPEILREKRVMTLDMGTVVAGTKYRGEFE 260
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
+RLKK+M+EI+Q+ +ILFIDE+HTLIGAG AEGAIDA+NILKPSL+RGELQCIGATTLD
Sbjct: 261 DRLKKVMDEIRQAGNVILFIDELHTLIGAGGAEGAIDASNILKPSLSRGELQCIGATTLD 320
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRK+IEKD ALERRFQP+KV EP+ ++++ ILKGLR+RYE HH+++ TDEA+ A +LS
Sbjct: 321 EYRKYIEKDAALERRFQPIKVKEPTKEQSVLILKGLRDRYEAHHRVKITDEAIKEAVRLS 380
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
+YISDRFLPDKAIDLIDEA S+VRLR P +E+E+ L + KEK+ AV+ Q+FEK
Sbjct: 381 DRYISDRFLPDKAIDLIDEAASKVRLRSYTAPPNLKEMEQHLESVKKEKDSAVQSQEFEK 440
Query: 301 AGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVS 360
A LRD+E LK Q+ + KE + G V D+ +VS WTGIPV K+
Sbjct: 441 AASLRDQEQKLKEQVDRCKKEWKE------KQGKENTQVLPDDVALVVSNWTGIPVVKME 494
Query: 361 TDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 420
ES+RLL ME LH+RVIGQ+EA+ AIS AIRRAR GLK+P RPI SFIF GPTGVGK+
Sbjct: 495 QKESERLLNMESILHERVIGQNEAINAISHAIRRARAGLKDPKRPIGSFIFLGPTGVGKT 554
Query: 421 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 480
ELA+A+A FG EE++IR+DMSE+ME+HT S+L+GSPPGYVG+ EGGQLTE VR++PY+
Sbjct: 555 ELARAVAETLFGDEESIIRIDMSEYMEKHTTSRLVGSPPGYVGHDEGGQLTEKVRQKPYS 614
Query: 481 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI 540
V+LFDEIEKAHPDVFN++LQ+L+DGRLTDSKGRTVDF+NT +IMTSNVG+S ++K + +
Sbjct: 615 VILFDEIEKAHPDVFNILLQVLDDGRLTDSKGRTVDFRNTAIIMTSNVGASQLKK-NKYV 673
Query: 541 GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 600
GF + DE+ Y +K V ELK+ FRPEFLNR+DE+IVF +L K E+ EI ++ +
Sbjct: 674 GFSV--DEEGHEYKEMKERVMGELKRAFRPEFLNRIDEIIVFHELKKEELMEIVTLLADQ 731
Query: 601 VFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEG 660
+ +RL + I++ +T+ + ++VEEGY+P YGARPLRRA+ R +ED ++E++L IK+G
Sbjct: 732 LRNRLSNQGIQIDLTDAAKRQIVEEGYDPEYGARPLRRALQRKVEDKLSEELLKGNIKKG 791
Query: 661 DSVIVDVDSDGNVTV 675
+V++D DG +V
Sbjct: 792 TNVVIDY-QDGEYSV 805
>gi|399055773|ref|ZP_10743423.1| ATPase with chaperone activity, ATP-binding subunit [Brevibacillus
sp. CF112]
gi|433543324|ref|ZP_20499734.1| negative regulator of genetic competence [Brevibacillus agri
BAB-2500]
gi|398046636|gb|EJL39230.1| ATPase with chaperone activity, ATP-binding subunit [Brevibacillus
sp. CF112]
gi|432185453|gb|ELK42944.1| negative regulator of genetic competence [Brevibacillus agri
BAB-2500]
Length = 816
Score = 812 bits (2098), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/668 (59%), Positives = 525/668 (78%), Gaps = 9/668 (1%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
++G S GG+ PTL+ +LT +A +G LDPV+GRQ +IERV+Q+L R
Sbjct: 144 LLGSSEMMASHQPSGGNPAANTPTLDGLARDLTAIARDGGLDPVIGRQKEIERVIQVLSR 203
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNP LIGEPGVGKTAIAEGLAQ+I + ++P+T+ K+V+TLDMG +VAGTKYRGEFE
Sbjct: 204 RTKNNPVLIGEPGVGKTAIAEGLAQKIVNNEIPETLRDKRVMTLDMGTVVAGTKYRGEFE 263
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
+RLKK+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKP+LARGELQC+GATTLD
Sbjct: 264 DRLKKIMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPALARGELQCVGATTLD 323
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRK+IEKD ALERRFQP++V EP+ ++ I+IL GLR+RYE HH+++ TDEA+ A +LS
Sbjct: 324 EYRKYIEKDAALERRFQPIQVDEPTAEDAIRILHGLRDRYEAHHRVKITDEAIEQAVKLS 383
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
+YI+DRFLPDKAIDL+DEA S+VRL+ +P +ELE L ++ KEK+ AV+ Q+FE+
Sbjct: 384 DRYITDRFLPDKAIDLVDEAASKVRLQSFTVPPNLKELEGRLEEVRKEKDAAVQSQEFEE 443
Query: 301 AGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVS 360
A LRD+E L+ ++ DK K+ K G + VT DI +V++WTGIPV K+
Sbjct: 444 AAALRDQEQKLREEL----DKTKKDWKERQ--GQLNMEVTPEDIATVVASWTGIPVLKLK 497
Query: 361 TDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 420
+E++RLLKMEE LH RVIGQDEAVK+ISRAIRRAR GLK+P RPI SFIF GPTGVGK+
Sbjct: 498 EEETERLLKMEEILHDRVIGQDEAVKSISRAIRRARAGLKDPKRPIGSFIFLGPTGVGKT 557
Query: 421 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 480
ELA+A+A FG E+AMIR+DMSE+ME+H+ ++L+G+PPGYVG+ EGGQLTE VRR+PY+
Sbjct: 558 ELARAVAETLFGDEDAMIRVDMSEYMEKHSTARLVGAPPGYVGFDEGGQLTEKVRRKPYS 617
Query: 481 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI 540
V+L DEIEKAHPDVFN++LQ+L+DGRLTDSKGRTVDF+NT++IMTSNVG+S+I+K +
Sbjct: 618 VILLDEIEKAHPDVFNILLQVLDDGRLTDSKGRTVDFRNTVVIMTSNVGASMIKK-NTTL 676
Query: 541 GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 600
GF + EK Y +K V +ELK+ FRPEFLNR+DE+IVF L + +++I +M E
Sbjct: 677 GFTTNDTEK--KYQDMKDKVMDELKKSFRPEFLNRIDEVIVFHSLEQEHIEQIVSLMTDE 734
Query: 601 VFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEG 660
+ RLK + I+ Q+TE ++ + +EG++P+YGARPLRRAI R +ED ++E++L I +G
Sbjct: 735 LRKRLKEQSIDFQLTEDAKKLLAKEGFDPAYGARPLRRAIQRHIEDKLSEELLKGNISKG 794
Query: 661 DSVIVDVD 668
D+V ++ +
Sbjct: 795 DTVNIEAE 802
>gi|226309775|ref|YP_002769669.1| negative regulator of genetic competence [Brevibacillus brevis NBRC
100599]
gi|226092723|dbj|BAH41165.1| negative regulator of genetic competence [Brevibacillus brevis NBRC
100599]
Length = 815
Score = 812 bits (2098), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/668 (59%), Positives = 527/668 (78%), Gaps = 9/668 (1%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
++G S GG+ PTL+ +LT +A +G LDPV+GRQ +IERV+Q+L R
Sbjct: 143 LLGSSEMMASHQPSGGNPAANTPTLDGLARDLTAIARDGGLDPVIGRQKEIERVIQVLSR 202
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNP LIGEPGVGKTAIAEGLAQ+I + ++P+T+ K+V+TLDMG +VAGTKYRGEFE
Sbjct: 203 RTKNNPVLIGEPGVGKTAIAEGLAQKIVNNEIPETLRDKRVMTLDMGTVVAGTKYRGEFE 262
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
+RLKK+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKP+LARGELQC+GATTLD
Sbjct: 263 DRLKKIMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPALARGELQCVGATTLD 322
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRK+IEKD ALERRFQP++V EP+ ++ I+IL GLR+RYE HH+++ TDEA+ A +LS
Sbjct: 323 EYRKYIEKDAALERRFQPIQVDEPTAEDAIRILHGLRDRYEAHHRVKITDEAIEQAVKLS 382
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
+YI++RFLPDKAIDL+DEA S+VRL+ +P +ELE L ++ KEK+ AV+ Q+FE+
Sbjct: 383 DRYITERFLPDKAIDLVDEAASKVRLQSFTVPPNLKELEGRLEEVRKEKDAAVQSQEFEE 442
Query: 301 AGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVS 360
A LRD+E L+ ++ DK K+ K G + VT DI +V++WTGIPV K+
Sbjct: 443 AAALRDQEQKLREEL----DKTKKDWKERQ--GQLNMEVTPEDIAQVVASWTGIPVLKLK 496
Query: 361 TDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 420
+E++RLLKMEE LH RVIGQDEAVK+ISRAIRRAR GLK+P RPI SFIF GPTGVGK+
Sbjct: 497 EEETERLLKMEEILHDRVIGQDEAVKSISRAIRRARAGLKDPKRPIGSFIFLGPTGVGKT 556
Query: 421 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 480
ELA+A+A FG E+AMIR+DMSE+ME+H+ ++L+G+PPGYVG+ EGGQLTE VRR+PY+
Sbjct: 557 ELARAVAETLFGDEDAMIRVDMSEYMEKHSTARLVGAPPGYVGFDEGGQLTEKVRRKPYS 616
Query: 481 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI 540
V+L DEIEKAHPDVFN++LQ+L+DGRLTDSKGRTVDF+NT++IMTSNVG+S+I+K +
Sbjct: 617 VILLDEIEKAHPDVFNILLQVLDDGRLTDSKGRTVDFRNTVVIMTSNVGASMIKK-NTTL 675
Query: 541 GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 600
GF + E+ Y +K V +ELK+ FRPEFLNR+DE+IVF L + +++I +M E
Sbjct: 676 GFTTNDSER--KYQDMKDKVMDELKKSFRPEFLNRIDEVIVFHSLEQEHIEQIVTLMTDE 733
Query: 601 VFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEG 660
+ RLK +DI+ Q+TE ++ + +EG++P+YGARPLRRAI R +ED+++E++L I +G
Sbjct: 734 LRKRLKEQDIDFQLTEEAKKVLAKEGFDPAYGARPLRRAIQRHIEDNLSEELLKGTISKG 793
Query: 661 DSVIVDVD 668
D+V ++ +
Sbjct: 794 DTVNIEAE 801
>gi|223042918|ref|ZP_03612966.1| ATPase family associated with various cellular activities (AAA)
protein [Staphylococcus capitis SK14]
gi|222443772|gb|EEE49869.1| ATPase family associated with various cellular activities (AAA)
protein [Staphylococcus capitis SK14]
Length = 817
Score = 812 bits (2098), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 388/655 (59%), Positives = 513/655 (78%), Gaps = 9/655 (1%)
Query: 16 GSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVG 75
+ N PTL+ +LT +A++G LDPVVGR +I RV+++L RRTKNNP LIGEPGVG
Sbjct: 154 ANKSNNTPTLDSLARDLTVIAKDGTLDPVVGRDKEITRVIEVLSRRTKNNPVLIGEPGVG 213
Query: 76 KTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDE 135
KTAIAEGLAQ I + +VP+T++ K+V++LDMG +VAGTKYRGEFEERLKK+MEEI Q+
Sbjct: 214 KTAIAEGLAQAIVNNEVPETLKDKRVMSLDMGTVVAGTKYRGEFEERLKKVMEEIHQAGN 273
Query: 136 IILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERR 195
+ILFIDE+HTL+GAG AEGAIDA+NILKP+LARGELQCIGATTLDEYRK+IEKD ALERR
Sbjct: 274 VILFIDELHTLVGAGGAEGAIDASNILKPALARGELQCIGATTLDEYRKNIEKDAALERR 333
Query: 196 FQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAID 255
FQPV+V EP+V++TI+ILKGLR+RYE HH++ +DEAL +AA+LS +Y+SDRFLPDKAID
Sbjct: 334 FQPVQVDEPTVEDTIEILKGLRDRYEAHHRINISDEALEAAAKLSNRYVSDRFLPDKAID 393
Query: 256 LIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQI 315
LIDEA S+VRL+ P +E+E+E+ + EK+ AV Q+FE A LRD++ L+ Q
Sbjct: 394 LIDEASSKVRLKSHTTPNNLKEIEQEIENVKNEKDAAVHAQEFENAANLRDKQSKLEKQY 453
Query: 316 SALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLH 375
++ K G V ++E DI +++ WTGIP+ K++ ESDRLL +E+TLH
Sbjct: 454 EEAKNEWK------NSQGGVSTALSEEDIAEVIAGWTGIPLTKINETESDRLLNLEDTLH 507
Query: 376 KRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEE 435
RVIGQ++AV +IS+A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+ALA FG ++
Sbjct: 508 NRVIGQNDAVNSISKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGEDD 567
Query: 436 AMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVF 495
AMIR+DMSEFME+H VS+L+G+PPGYVG+ +GGQLTE VRR+PY+V+LFDEIEKAHPDVF
Sbjct: 568 AMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKVRRKPYSVILFDEIEKAHPDVF 627
Query: 496 NMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNR 555
N++LQ+L+DG LTD+KGRTVDF+NT++IMTSNVG+ ++ R GF + D Y
Sbjct: 628 NILLQVLDDGHLTDTKGRTVDFRNTVIIMTSNVGAQELQD-QRFAGFGGASEGND--YET 684
Query: 556 IKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVT 615
I+ + +ELK FRPEFLNR+D++IVF +L+K E+KEI +M+K++ DRL ++I + VT
Sbjct: 685 IRKTMMKELKNSFRPEFLNRVDDIIVFHKLSKEELKEIVTMMVKKLTDRLSEQNINISVT 744
Query: 616 ERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSD 670
++ +E++ EEGY+P YGARPL RAI + +ED+++E +L EG V +D D D
Sbjct: 745 DKAKEKIAEEGYDPEYGARPLIRAIQKTVEDNLSELILDGNQIEGKEVTIDHDGD 799
>gi|397903987|ref|ZP_10504920.1| ATP-dependent Clp protease, ATP-binding subunit ClpC / Negative
regulator of genetic competence clcC/mecB [Caloramator
australicus RC3]
gi|343178731|emb|CCC57819.1| ATP-dependent Clp protease, ATP-binding subunit ClpC / Negative
regulator of genetic competence clcC/mecB [Caloramator
australicus RC3]
Length = 818
Score = 812 bits (2097), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/657 (61%), Positives = 532/657 (80%), Gaps = 8/657 (1%)
Query: 12 GVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGE 71
G G PTL++YG +LT+LA EGKLDPV+GR+ + ERV++IL RRTKNNPCLIGE
Sbjct: 156 GPGTRHRQTNTPTLDQYGRDLTELAREGKLDPVIGRENETERVIEILSRRTKNNPCLIGE 215
Query: 72 PGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIK 131
PGVGKTAIAEGLAQRI G+VP+ ++ K+V+TLD+ +VAG+KYRGEFEER+K++M+EI+
Sbjct: 216 PGVGKTAIAEGLAQRIVEGNVPEILKNKRVVTLDLSGMVAGSKYRGEFEERIKRVMDEIR 275
Query: 132 QSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPA 191
++ IILFIDE+HTL+GAGAAEGAIDA+NILKP+LARGE+Q IGATT+DEYRK+IEKD A
Sbjct: 276 RAGNIILFIDEIHTLVGAGAAEGAIDASNILKPALARGEIQVIGATTIDEYRKYIEKDSA 335
Query: 192 LERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPD 251
LERRFQPV+V EPS +E+I ILKGLR++YE HHK++ TDEAL +A LS++YI+DRFLPD
Sbjct: 336 LERRFQPVQVGEPSTEESILILKGLRDKYEAHHKVKITDEALEAAVNLSHRYITDRFLPD 395
Query: 252 KAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDL 311
KAIDL+DEA ++VRL++ P + + LE+EL ++ KEK EA+ Q+FEKA +LRDRE ++
Sbjct: 396 KAIDLMDEAAAKVRLKNLTAPPDVKNLEEELEKVRKEKEEAINTQEFEKAAKLRDRENEI 455
Query: 312 KAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKME 371
K ++ + + +E PVVT DI ++VS WTGIPV K++ ES++LLK+E
Sbjct: 456 KNELERIKKDWQNQKDSEV------PVVTVEDIANVVSRWTGIPVNKLTETESEKLLKLE 509
Query: 372 ETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYF 431
E LH+RV+GQDEAVKA++RA+RRARVG+K+P RPI SFIF GPTGVGK+EL+KALA F
Sbjct: 510 EILHQRVVGQDEAVKAVARAVRRARVGIKDPKRPIGSFIFLGPTGVGKTELSKALAEAMF 569
Query: 432 GSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAH 491
G E AMIR+DMSE+ME+HTVS+LIGSPPGYVGY EGGQLTE VRR+PY+VVLFDEIEKAH
Sbjct: 570 GDENAMIRIDMSEYMEKHTVSRLIGSPPGYVGYEEGGQLTEKVRRKPYSVVLFDEIEKAH 629
Query: 492 PDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYD-EKD 550
PDVFN++LQILEDGRLTD KG+TVDF+NT++IMTSNVG+ I+K + +GF + EK+
Sbjct: 630 PDVFNILLQILEDGRLTDGKGKTVDFRNTIVIMTSNVGAQTIKK-QQTLGFAATTEKEKE 688
Query: 551 SSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDI 610
SY ++K V E+LK+ FRPEFLNR+DE+IVF L ++++IA++MLK V +RLK ++
Sbjct: 689 DSYEKMKQNVMEDLKKTFRPEFLNRIDEIIVFHPLEDKDIEKIAELMLKSVINRLKDLEV 748
Query: 611 ELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDV 667
E+ E + + ++G++P+YGARPLRRAI + +ED ++E+ML IK GD V++ V
Sbjct: 749 EISYDEDVIKHLSKQGFDPTYGARPLRRAITKAVEDKLSEEMLKGNIKRGDKVVMKV 805
>gi|317123126|ref|YP_004103129.1| ATPase AAA [Thermaerobacter marianensis DSM 12885]
gi|315593106|gb|ADU52402.1| ATPase AAA-2 domain protein [Thermaerobacter marianensis DSM 12885]
Length = 839
Score = 811 bits (2096), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/652 (63%), Positives = 523/652 (80%), Gaps = 8/652 (1%)
Query: 23 PTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEG 82
P L+ +G +LT++AEEGKLDPV+GR +IERV+QIL RRTKNNP LIGEPGVGKTAI EG
Sbjct: 163 PVLDNFGRDLTQMAEEGKLDPVIGRDKEIERVIQILSRRTKNNPVLIGEPGVGKTAIVEG 222
Query: 83 LAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDE 142
LAQRIA G VP+ ++ ++V++LD+G LVAG+KYRGEFEERLKK+M+EI+++ IILFIDE
Sbjct: 223 LAQRIAEGKVPEILKDRRVVSLDLGALVAGSKYRGEFEERLKKVMDEIRRAGNIILFIDE 282
Query: 143 VHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVP 202
+HT+IGAGAAEGAIDAA+ILKP+LARGELQ IGATTLDEYRKH+EKD ALERRFQP+ V
Sbjct: 283 MHTIIGAGAAEGAIDAASILKPALARGELQTIGATTLDEYRKHVEKDAALERRFQPIMVE 342
Query: 203 EPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGS 262
EPSV++ IQIL+GLR+RYE HH++ TD+A+V+A +L+ +YISDRFLPDKAIDLIDEA S
Sbjct: 343 EPSVEDAIQILRGLRDRYEAHHRVEITDDAIVAAVKLADRYISDRFLPDKAIDLIDEAAS 402
Query: 263 RVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKG 322
R RL+ P E +E+E+ L +I KEK AV+ Q+FEKA LRD+E L ++ ++
Sbjct: 403 RARLQAFVAPPELKEIEQRLEEIRKEKEAAVQSQEFEKAANLRDQEQKLVEELERKKNEW 462
Query: 323 KEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQD 382
++ E VVT DI IVS WTGIPV ++ ES+RLLK+EE LH+R++GQD
Sbjct: 463 QQQQLNEK------IVVTADDIAQIVSNWTGIPVRRLEQAESERLLKLEEILHERIVGQD 516
Query: 383 EAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDM 442
+AVKA++RAIRRAR GLK+P RPI SFIF GPTGVGK+ELAKALA FG E+AMI LDM
Sbjct: 517 DAVKAVARAIRRARAGLKDPRRPIGSFIFLGPTGVGKTELAKALAEALFGDEDAMIVLDM 576
Query: 443 SEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQIL 502
SE+MERHTVS+L+GSPPGYVGY EGGQLTE VRRRPY+VV+FDEIEKAHP+VFN++LQIL
Sbjct: 577 SEYMERHTVSRLVGSPPGYVGYEEGGQLTEQVRRRPYSVVVFDEIEKAHPEVFNVLLQIL 636
Query: 503 EDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTE 562
E+GRLT++KGRTVDF+NT++IMTSNVG+ +I + R+GF D++ Y +K + +
Sbjct: 637 EEGRLTEAKGRTVDFRNTVIIMTSNVGADLIRRQT-RVGFQAG-DQEAPDYEDMKRKIMD 694
Query: 563 ELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERV 622
E+K+ FRPEFLNR+DE+IVF LT+ + I D+MLK V RLK +EL+VTE + ++
Sbjct: 695 EVKRTFRPEFLNRIDELIVFHALTEEHLMRIVDLMLKRVAQRLKEHGLELEVTEAAKRKL 754
Query: 623 VEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVT 674
V+EG + YGARPLRR I RL+ED ++E+MLA KEGD+V+VDVD +G +
Sbjct: 755 VKEGADVVYGARPLRRTITRLVEDPLSEEMLAGRFKEGDTVVVDVDEEGRIV 806
>gi|433654066|ref|YP_007297774.1| ATPase with chaperone activity, ATP-binding subunit
[Thermoanaerobacterium thermosaccharolyticum M0795]
gi|433292255|gb|AGB18077.1| ATPase with chaperone activity, ATP-binding subunit
[Thermoanaerobacterium thermosaccharolyticum M0795]
Length = 810
Score = 811 bits (2096), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/662 (60%), Positives = 534/662 (80%), Gaps = 8/662 (1%)
Query: 5 STEAVGAGVGGGSSGN-KMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTK 63
S E GA + N P L ++G +LT LA EGKLDPV+GR+ +IERV+QIL RRTK
Sbjct: 144 SEEPSGAANKAQRAKNTNTPNLNQFGRDLTDLAREGKLDPVIGREKEIERVIQILSRRTK 203
Query: 64 NNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERL 123
NNPCLIGEPGVGKTAIAEGLA+ I SG +P+ ++GK+V+TLDM +VAGTKYRGEFE+RL
Sbjct: 204 NNPCLIGEPGVGKTAIAEGLAEAIESGTIPEILKGKRVVTLDMASMVAGTKYRGEFEDRL 263
Query: 124 KKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYR 183
K ++ E+ ++ +ILFIDE+HT+IGAGAAEGAIDA+NILKP+LARGE+Q IGATT+DEYR
Sbjct: 264 KNVLNEVIKAGNVILFIDELHTIIGAGAAEGAIDASNILKPALARGEIQVIGATTIDEYR 323
Query: 184 KHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQY 243
K+IEKDPALERRFQP+ V EPSV+ETI+ILKGLR++YE HH+++ TDEA+ +AA+LS++Y
Sbjct: 324 KYIEKDPALERRFQPIMVEEPSVEETIEILKGLRDKYEAHHRIKITDEAIEAAAKLSHRY 383
Query: 244 ISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGE 303
I+DR+LPDKAIDLIDEA SRVRL+ P E +ELE +L + K+K EA+R Q++EKA +
Sbjct: 384 ITDRYLPDKAIDLIDEAASRVRLKTVTAPPEIKELEDKLNMLNKDKEEAIRTQEYEKAAK 443
Query: 304 LRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDE 363
+RD E +K Q+ L K ++ S + ++ V +I IVS WTGIP +K++ +E
Sbjct: 444 IRDEEQKIKEQLENLKSKWQQNSLVKDKS------VGAEEISQIVSLWTGIPTQKLAQEE 497
Query: 364 SDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELA 423
S+RLL +EE LHKRVIGQ+EAV A++RAIRRARVGLK+P RPI SFIF GPTGVGK+EL+
Sbjct: 498 SERLLHLEEILHKRVIGQNEAVDAVARAIRRARVGLKDPRRPIGSFIFLGPTGVGKTELS 557
Query: 424 KALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVL 483
KALA FG E A++R+DMSE+ME+ +VS+LIGSPPGYVGY EGG+LTE +RR+PY+V+L
Sbjct: 558 KALAEAMFGDESAIVRIDMSEYMEKFSVSRLIGSPPGYVGYEEGGELTEKIRRKPYSVIL 617
Query: 484 FDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFD 543
FDEIEKAHPDVFN++LQIL+DGRLTDSKGRTVDFKNTL+IMTSNVG+ +I+K +GF
Sbjct: 618 FDEIEKAHPDVFNILLQILDDGRLTDSKGRTVDFKNTLIIMTSNVGAQLIKK-QTTLGFM 676
Query: 544 LDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFD 603
+ +E +SY ++K + +ELK+ FRPEFLNR+D++IVFRQLT+ ++++I D+M+ ++
Sbjct: 677 PEGEENKASYEKMKENILDELKKSFRPEFLNRIDDIIVFRQLTQDDIRKITDLMIADLNK 736
Query: 604 RLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSV 663
RLK +I L+ T+ +E +++EGY+ +YGARPLRRAI +++E ++E ML E+K GD +
Sbjct: 737 RLKDNNISLEFTDDAKEELLKEGYDVTYGARPLRRAIQKVVESELSELMLKGEVKSGDKI 796
Query: 664 IV 665
+V
Sbjct: 797 LV 798
>gi|398813140|ref|ZP_10571842.1| ATPase with chaperone activity, ATP-binding subunit [Brevibacillus
sp. BC25]
gi|398039301|gb|EJL32439.1| ATPase with chaperone activity, ATP-binding subunit [Brevibacillus
sp. BC25]
Length = 816
Score = 811 bits (2096), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 394/668 (58%), Positives = 527/668 (78%), Gaps = 9/668 (1%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
++G S GG+ PTL+ +LT +A +G LDPV+GRQ +IERV+Q+L R
Sbjct: 144 LLGSSEMMASHQPSGGNPAANTPTLDGLARDLTAIARDGGLDPVIGRQKEIERVIQVLSR 203
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNP LIGEPGVGKTAIAEGLAQ+I + ++P+T+ K+V+TLDMG +VAGTKYRGEFE
Sbjct: 204 RTKNNPVLIGEPGVGKTAIAEGLAQKIVNNEIPETLRDKRVMTLDMGTVVAGTKYRGEFE 263
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
+RLKK+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKP+LARGELQC+GATTLD
Sbjct: 264 DRLKKIMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPALARGELQCVGATTLD 323
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRK+IEKD ALERRFQP++V EP+ ++ I+IL GLR+RYE HH+++ TDEA+ A +LS
Sbjct: 324 EYRKYIEKDAALERRFQPIQVDEPTAEDAIRILHGLRDRYEAHHRVKITDEAIEQAVKLS 383
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
+YI++RFLPDKAIDL+DEA S+VRL+ +P +ELE L ++ KEK+ AV+ Q+FE+
Sbjct: 384 DRYITERFLPDKAIDLVDEAASKVRLQSFTVPPNLKELEGRLEEVRKEKDAAVQSQEFEE 443
Query: 301 AGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVS 360
A LRD+E L+ ++ DK K+ K G + VT DI +V++WTGIPV K+
Sbjct: 444 AAALRDQEQKLREEL----DKTKKDWKERQ--GQLNMEVTPEDIAQVVASWTGIPVLKLK 497
Query: 361 TDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 420
+E++RLLKMEE LH RVIGQDEAVK+ISRAIRRAR GLK+P RPI SFIF GPTGVGK+
Sbjct: 498 EEETERLLKMEEILHDRVIGQDEAVKSISRAIRRARAGLKDPKRPIGSFIFLGPTGVGKT 557
Query: 421 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 480
ELA+A+A FG E+AMIR+DMSE+ME+H+ ++L+G+PPGYVG+ EGGQLTE VRR+PY+
Sbjct: 558 ELARAVAETLFGDEDAMIRVDMSEYMEKHSTARLVGAPPGYVGFDEGGQLTEKVRRKPYS 617
Query: 481 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI 540
V+L DEIEKAHPDVFN++LQ+L+DGRLTDSKGRTVDF+NT++IMTSNVG+++I+K +
Sbjct: 618 VILLDEIEKAHPDVFNILLQVLDDGRLTDSKGRTVDFRNTVVIMTSNVGANMIKK-NTTL 676
Query: 541 GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 600
GF + E+ Y +K V +ELK+ FRPEFLNR+DE+IVF L + +++I +M E
Sbjct: 677 GFTTNDSER--KYQDMKDKVMDELKKSFRPEFLNRIDEVIVFHSLEQEHIEQIVSLMTDE 734
Query: 601 VFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEG 660
+ RLK +DI+ Q+TE ++ + +EG++P+YGARPLRRAI R +ED+++E++L I +G
Sbjct: 735 LRKRLKEQDIDFQLTEEAKKVLAKEGFDPAYGARPLRRAIQRHIEDNLSEELLKGTISKG 794
Query: 661 DSVIVDVD 668
D+V ++ +
Sbjct: 795 DTVNIEAE 802
>gi|158319507|ref|YP_001512014.1| ATPase [Alkaliphilus oremlandii OhILAs]
gi|158139706|gb|ABW18018.1| ATPase AAA-2 domain protein [Alkaliphilus oremlandii OhILAs]
Length = 813
Score = 811 bits (2096), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/676 (57%), Positives = 533/676 (78%), Gaps = 11/676 (1%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
++ ++ A A SS + PTL ++G +L LA EGK+DPV+GR +I+RV+Q+L R
Sbjct: 142 LLNSNSSASNAKNYTASSDKETPTLNQFGRDLNDLAREGKIDPVIGRSKEIDRVIQVLSR 201
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNPCLIGEPGVGKTA+AEGLAQ+I G+VPD ++ K+V+TLD+ +VAG KYRGEFE
Sbjct: 202 RTKNNPCLIGEPGVGKTAVAEGLAQQIVEGNVPDILKDKRVVTLDLASMVAGAKYRGEFE 261
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
+RLKK+MEEI+ D +ILFIDE+HT+IGAGAAEGAIDAANILKP+LARGE+Q IGATTL+
Sbjct: 262 DRLKKVMEEIRSVDNVILFIDEMHTIIGAGAAEGAIDAANILKPALARGEMQVIGATTLN 321
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRKHIEKD ALERRFQP+ V EPS+++ I+IL+GLR++YE HH ++ TDEAL +A +LS
Sbjct: 322 EYRKHIEKDAALERRFQPITVEEPSIEDAIRILEGLRDKYEAHHGVKITDEALKAAVELS 381
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
+YI+DRFLPDKAIDLIDEA S+V++ P + R+LE+ L +++ EK EA+ QDFE+
Sbjct: 382 ARYITDRFLPDKAIDLIDEAASKVKIFTVTTPPDLRDLEERLEKLSNEKEEAISVQDFER 441
Query: 301 AGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVS 360
A +LRD E K AL ++ +++K +A +V+ +I +IVS WTG+PV ++
Sbjct: 442 AAKLRDEEKQTK---EALAERKNDVNKRHKDA-----IVSSEEIANIVSDWTGVPVRRLQ 493
Query: 361 TDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 420
ES++LL MEE LH RVIGQ+EAVK+I+RAIRRARVGLK+P RPI SFIF GPTGVGK+
Sbjct: 494 QGESEKLLNMEEILHNRVIGQEEAVKSIARAIRRARVGLKDPKRPIGSFIFLGPTGVGKT 553
Query: 421 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 480
EL+KALA FG+E+ MIR+DMSE+ME+HTVS+LIGSPPGYVG+ EGGQLTE VRR+PY+
Sbjct: 554 ELSKALAESMFGNEDDMIRIDMSEYMEKHTVSRLIGSPPGYVGFDEGGQLTEKVRRKPYS 613
Query: 481 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI 540
VVLFDEIEKAHPDVFN++LQIL+DGRLTD++GRTVDFKNT++IMTSNVG+ I+K + +
Sbjct: 614 VVLFDEIEKAHPDVFNILLQILDDGRLTDAQGRTVDFKNTVIIMTSNVGAHTIKK-QKIL 672
Query: 541 GFDLDYDEK-DSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 599
GF +E + Y ++K + +EL++ FRPEFLNR+D++IVF L + ++ +I D++L
Sbjct: 673 GFAASQEESAQNEYEKMKENIMDELRRTFRPEFLNRIDDIIVFHGLEREDIGKIVDLLLV 732
Query: 600 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 659
++ RLK +I+L+++E + + ++G++P +GARPL+R I R +E+ ++E++L IK
Sbjct: 733 DLKSRLKALEIDLEISEEAKNYIADKGFDPQFGARPLKREIQRTVENQLSEELLRGSIKA 792
Query: 660 GDSVIVDVDSDGNVTV 675
G +V+VD+ SDG + +
Sbjct: 793 GSTVLVDL-SDGKIVI 807
>gi|325288483|ref|YP_004264664.1| ATPase AAA [Syntrophobotulus glycolicus DSM 8271]
gi|324963884|gb|ADY54663.1| ATPase AAA-2 domain protein [Syntrophobotulus glycolicus DSM 8271]
Length = 841
Score = 811 bits (2094), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/657 (59%), Positives = 522/657 (79%), Gaps = 9/657 (1%)
Query: 14 GGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPG 73
GG + + P L E+G +LT +A+E KLDPV+GR+ +IERV+Q+L RRTKNNP LIGEPG
Sbjct: 159 GGKNVSSNTPALNEFGRDLTVMAQEKKLDPVIGREKEIERVIQVLSRRTKNNPVLIGEPG 218
Query: 74 VGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQS 133
VGKTAIAEGLAQRI SG VP+ + K+V+TLD+ +VAGTKYRGEFEER+KK+MEEI+ +
Sbjct: 219 VGKTAIAEGLAQRIVSGGVPEILADKRVVTLDLSSMVAGTKYRGEFEERMKKVMEEIRFA 278
Query: 134 DEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALE 193
II+FIDE+HTLIGAGAAEGAIDAANILKP+LARGE+QC+GATTLDEYRK+IE+D ALE
Sbjct: 279 GNIIIFIDELHTLIGAGAAEGAIDAANILKPALARGEMQCVGATTLDEYRKYIERDSALE 338
Query: 194 RRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKA 253
RRFQP+K+ EP+V+E I+ILKGLR+RYE HH+++ TDEA+ +A +LS +YISDRFLPDKA
Sbjct: 339 RRFQPIKIGEPTVEEAIEILKGLRDRYEAHHRVKITDEAIEAAVRLSDRYISDRFLPDKA 398
Query: 254 IDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKA 313
IDL+DEA S+VRL P E +ELE E+ + KEK AV+ Q+FE+A ++RD+E +
Sbjct: 399 IDLMDEAASKVRLSSYTAPGELKELETEVEALKKEKEAAVKRQEFEQAAKIRDQEQQKRE 458
Query: 314 QISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEET 373
Q+S L K E ++ + + ++ + DI IVS+WTGIPV K+ +ES RLLK+EE
Sbjct: 459 QLSTL-RKDWEANREKNLS-----ILNQEDIGKIVSSWTGIPVNKLEEEESARLLKLEEV 512
Query: 374 LHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGS 433
LH+RV+GQ+EAV A++R++RRAR GLK+P RPI SFIF GPTGVGK+ELA+ALA FG
Sbjct: 513 LHERVVGQEEAVSAVARSVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAEALFGD 572
Query: 434 EEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPD 493
E ++IR+DMSE+ME+H VS+++GSPPGYVG+ EGGQLTEAVRR+PY+V+LFDEIEKAHP+
Sbjct: 573 ENSLIRVDMSEYMEKHAVSRMVGSPPGYVGHDEGGQLTEAVRRKPYSVLLFDEIEKAHPE 632
Query: 494 VFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSY 553
VFN++LQ+LEDGRLTDSKGR VDF+N +L+MTSNVG+S + K +GF + E DS Y
Sbjct: 633 VFNILLQVLEDGRLTDSKGRVVDFRNCVLMMTSNVGASFLRKEA--MGFMSSHSE-DSEY 689
Query: 554 NRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQ 613
+ + V EELK+ F+PEFLNR+DE++VF QL E+++IA I+L + RL+ ++ +
Sbjct: 690 RNMSANVMEELKKVFKPEFLNRIDEIVVFHQLKDEELQKIAAILLASLGKRLQQQNYTII 749
Query: 614 VTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSD 670
E+ + V +EG +P++GARPLRRAI RL+ED ++E++L + K GD++ V +++
Sbjct: 750 ADEKAMQLVAKEGNDPAFGARPLRRAIQRLIEDPLSERILQEQFKPGDTIYVSAENN 806
>gi|89893184|ref|YP_516671.1| hypothetical protein DSY0438 [Desulfitobacterium hafniense Y51]
gi|219666457|ref|YP_002456892.1| ATPase AAA [Desulfitobacterium hafniense DCB-2]
gi|423073164|ref|ZP_17061907.1| negative regulator of genetic competence ClpC/MecB
[Desulfitobacterium hafniense DP7]
gi|89332632|dbj|BAE82227.1| hypothetical protein [Desulfitobacterium hafniense Y51]
gi|219536717|gb|ACL18456.1| ATPase AAA-2 domain protein [Desulfitobacterium hafniense DCB-2]
gi|361855994|gb|EHL07928.1| negative regulator of genetic competence ClpC/MecB
[Desulfitobacterium hafniense DP7]
Length = 826
Score = 810 bits (2093), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/651 (60%), Positives = 519/651 (79%), Gaps = 15/651 (2%)
Query: 23 PTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEG 82
P L E+G +LT+ A EG+LDPVVGR+ +IERVVQ+L RRTKNNP LIGEPGVGKTAIAEG
Sbjct: 169 PALNEFGRDLTQQAREGRLDPVVGREDEIERVVQVLSRRTKNNPVLIGEPGVGKTAIAEG 228
Query: 83 LAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDE 142
LAQRI + VP+T+ GK+V+TLD+ +VAG+KYRGEFEERLKK+MEEI+ II+FIDE
Sbjct: 229 LAQRIINNKVPETLAGKRVVTLDLSAVVAGSKYRGEFEERLKKVMEEIRVDGRIIVFIDE 288
Query: 143 VHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVP 202
+HTLIGAGAAEGAIDAANILKP+LARGELQCIGATTLDEYRK+IEKDPALERRFQP+ V
Sbjct: 289 LHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKYIEKDPALERRFQPITVG 348
Query: 203 EPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGS 262
EP+V++ +QIL GLR+RYE HH+ + TDEA+ +A ++S +YISDRFLPDKAIDL+DEA S
Sbjct: 349 EPTVEQAVQILLGLRDRYEAHHRTQITDEAVEAAVKMSDRYISDRFLPDKAIDLMDEAAS 408
Query: 263 RVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLK---AQISALV 319
RVRL P + + LE+++ + EK AV GQ+FEKA + RD E L+ AQ+
Sbjct: 409 RVRLAAFTAPPDLKSLEEKIEALKSEKEAAVLGQEFEKAAKFRDEEHQLREELAQLRNTW 468
Query: 320 DKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVI 379
+ +++S+++ VT DI IV++WTGIPV+K++ +ES+RLL +EETLH+RV+
Sbjct: 469 ESKRDISQSQ---------VTADDIAQIVASWTGIPVKKLAQEESERLLGLEETLHQRVV 519
Query: 380 GQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIR 439
GQ++AVKA+SRA+RRAR GLK+P RP+ SFIF GPTGVGK+ELA+ALA FG E+A+IR
Sbjct: 520 GQEDAVKAVSRAVRRARAGLKDPKRPVGSFIFLGPTGVGKTELARALAEALFGEEDALIR 579
Query: 440 LDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMML 499
+DMSE+ME+H VS+L+G+PPGY+G+ EGGQLTEA+RR+PY+V+L DEIEKAHP+VFN++L
Sbjct: 580 IDMSEYMEKHAVSRLVGAPPGYIGHDEGGQLTEAIRRKPYSVILLDEIEKAHPEVFNILL 639
Query: 500 QILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSL 559
Q+LEDGRLTD+KGRTVDF+N ++IMTSNVG+S ++K +GF DE ++ Y + S
Sbjct: 640 QVLEDGRLTDTKGRTVDFRNAVIIMTSNVGASFMKKEA--LGFASRRDE-ETEYKNMSSR 696
Query: 560 VTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFR 619
V EELK+ FRPEFLNR+DE++VF L + +I +I++K+V RL+ + +LQV +
Sbjct: 697 VMEELKKTFRPEFLNRVDEIVVFHSLQTEGLLKITEILMKQVNGRLQEQGYDLQVEKSAL 756
Query: 620 ERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSD 670
E + +EG +P++GARPLRRAI RL+EDS++EK+L E K GD + V+ D
Sbjct: 757 ELIAKEGNDPTFGARPLRRAIQRLIEDSLSEKILLGEFKSGDKIKVEAVED 807
>gi|126653478|ref|ZP_01725571.1| ATP-dependent Clp protease ATPase subunit [Bacillus sp. B14905]
gi|126589756|gb|EAZ83890.1| ATP-dependent Clp protease ATPase subunit [Bacillus sp. B14905]
Length = 814
Score = 810 bits (2093), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/648 (61%), Positives = 515/648 (79%), Gaps = 9/648 (1%)
Query: 23 PTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEG 82
PTL+ +LT++A EG LDPV+GR +I RV+++L RRTKNNP LIGEPGVGKTAIAEG
Sbjct: 162 PTLDSLARDLTQIAREGTLDPVIGRSKEITRVIEVLSRRTKNNPVLIGEPGVGKTAIAEG 221
Query: 83 LAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDE 142
LAQ+I + +VP+ + K+V+TLDMG +VAGTKYRGEFE+RLKK+M+EI+Q+ IILFIDE
Sbjct: 222 LAQQIINNEVPEILRDKRVMTLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDE 281
Query: 143 VHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVP 202
+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTLDEYRK+IEKD ALERRFQP++V
Sbjct: 282 LHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEYRKYIEKDAALERRFQPIQVD 341
Query: 203 EPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGS 262
EP+V+E I I++GLR+RYE HH+++ TDEA+ +AA++ +YISDRFLPDKAIDLIDEAGS
Sbjct: 342 EPTVEEAILIIQGLRDRYEAHHRVKITDEAIEAAAKMGDRYISDRFLPDKAIDLIDEAGS 401
Query: 263 RVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKG 322
+VRLR +P + LE +L + EKN AV GQ+FEKA LRD E LK +I A
Sbjct: 402 KVRLRSFAVPPNLKALEDKLENVRSEKNAAVSGQEFEKAAALRDTEQKLKDEIEATRKNW 461
Query: 323 KEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQD 382
KE E G VT D+ +VS WTGIPV K++++ES +LL++EE LHKRV+GQ
Sbjct: 462 KE------EQGKAESKVTVDDVAAVVSMWTGIPVAKIASEESSKLLQLEEELHKRVVGQG 515
Query: 383 EAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDM 442
EAV+AISRAIRRAR GLK+P RPI SFIF GPTGVGK+ELA+ALA FG E+AMIR+DM
Sbjct: 516 EAVEAISRAIRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAEVMFGDEDAMIRVDM 575
Query: 443 SEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQIL 502
SE+ME+H+ S+L+GSPPGYVG+ +GGQLTE VRR+PY+VVL DEIEKAHPDVFN++LQ+L
Sbjct: 576 SEYMEKHSTSRLVGSPPGYVGFDDGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVL 635
Query: 503 EDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTE 562
EDGRLTDSKGR VDF+NT++IMTSNVG+ + K + +GF++ DS +N +KS + E
Sbjct: 636 EDGRLTDSKGRVVDFRNTVVIMTSNVGADAL-KYQKSLGFNVGG--ADSKHNDMKSTMLE 692
Query: 563 ELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERV 622
ELK+ FRPEFLNR+DEMIVF L K +KEI +M + RLK +DI L++T+ E++
Sbjct: 693 ELKKAFRPEFLNRIDEMIVFHSLEKEHLKEIIAMMGNALTKRLKEQDISLELTDAALEKI 752
Query: 623 VEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSD 670
+EGY+P YGARPLRRA+ + +ED ++E++L +++G+ V++D +D
Sbjct: 753 AQEGYDPQYGARPLRRALQKQVEDRLSEELLKGNVEKGNHVVIDYVND 800
>gi|431792439|ref|YP_007219344.1| chaperone ATPase [Desulfitobacterium dichloroeliminans LMG P-21439]
gi|430782665|gb|AGA67948.1| ATPase with chaperone activity, ATP-binding subunit
[Desulfitobacterium dichloroeliminans LMG P-21439]
Length = 827
Score = 810 bits (2093), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/664 (59%), Positives = 524/664 (78%), Gaps = 16/664 (2%)
Query: 11 AGVGGGSSG-NKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLI 69
A V + G + P L E+G +LT+ A +GKLDPVVGR+ +IERVVQ+L RRTKNNP LI
Sbjct: 156 ANVNAKNPGPSNTPALNEFGRDLTQQARDGKLDPVVGREDEIERVVQVLSRRTKNNPVLI 215
Query: 70 GEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEE 129
GEPGVGKTAIAEGLAQRI S VP+T+ GK+V+TLD+ +VAG+KYRGEFEERLKK+MEE
Sbjct: 216 GEPGVGKTAIAEGLAQRIISNKVPETLAGKRVVTLDLSAVVAGSKYRGEFEERLKKVMEE 275
Query: 130 IKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKD 189
I+ +II+FIDE+HTLIGAGAAEGAIDAANILKP+LARGELQCIGATTLDEYRK+IEKD
Sbjct: 276 IRVDGKIIVFIDELHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKYIEKD 335
Query: 190 PALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFL 249
PALERRFQP+KV EP+V++ IQIL GLR+RYE HH+ + TDEA+ +A ++S +YISDRFL
Sbjct: 336 PALERRFQPIKVGEPTVEQAIQILYGLRDRYEAHHRTKITDEAIEAAVKMSDRYISDRFL 395
Query: 250 PDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREM 309
PDKAIDL+DEA SRVRL P + + LE+++ + EK AV Q+FEKA + RD E
Sbjct: 396 PDKAIDLMDEAASRVRLTAFTAPPDLQSLEEKIEALKSEKEAAVSSQEFEKAAKFRDEEH 455
Query: 310 DLK---AQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDR 366
L+ AQ+ + +++S+++ A DI IV++WTGIPV+K++ +ES+R
Sbjct: 456 KLREELAQLRNSWESKRDVSESQVVAD---------DIAQIVASWTGIPVKKLAQEESER 506
Query: 367 LLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKAL 426
LL++E+TLH+RV+GQ++AVKA+SRA+RRAR GLK+P RP+ SFIF GPTGVGK+ELA+AL
Sbjct: 507 LLRLEDTLHQRVVGQEDAVKAVSRAVRRARAGLKDPKRPVGSFIFLGPTGVGKTELARAL 566
Query: 427 AAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDE 486
A FG E+A++R+DMSE+ME+H VS+L+G+PPGY+G+ EGGQLTEA+RR+PY+V+L DE
Sbjct: 567 AEALFGEEDALVRIDMSEYMEKHAVSRLVGAPPGYIGHDEGGQLTEAIRRKPYSVILLDE 626
Query: 487 IEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDY 546
IEKAHP+VFN++LQ+LEDGRLTD+KGRTVDF+N ++IMTSNVG+S+++K +GF
Sbjct: 627 IEKAHPEVFNILLQVLEDGRLTDTKGRTVDFRNAVIIMTSNVGASMMKKEA--MGFANRR 684
Query: 547 DEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLK 606
DE + Y + + V E+LK+ FRPEFLNR+DE +VF L + +I +I++K+V RLK
Sbjct: 685 DET-TEYKNMSARVMEDLKKTFRPEFLNRVDETVVFHSLQSEGLLKITEILMKQVSTRLK 743
Query: 607 TKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVD 666
+D +LQV + E + +EG +P+YGARPLRRAI RL+ED ++EK+L E K GD + V
Sbjct: 744 EQDYDLQVEKSALELIAKEGNDPTYGARPLRRAIQRLIEDGLSEKILLGEFKPGDKIKVT 803
Query: 667 VDSD 670
+ D
Sbjct: 804 AEED 807
>gi|379724697|ref|YP_005316828.1| protein ClpC [Paenibacillus mucilaginosus 3016]
gi|386727451|ref|YP_006193777.1| protein ClpC [Paenibacillus mucilaginosus K02]
gi|378573369|gb|AFC33679.1| ClpC [Paenibacillus mucilaginosus 3016]
gi|384094576|gb|AFH66012.1| protein ClpC [Paenibacillus mucilaginosus K02]
Length = 814
Score = 810 bits (2092), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/671 (59%), Positives = 521/671 (77%), Gaps = 10/671 (1%)
Query: 5 STEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKN 64
S+E V G ++ N PTL+ +LT A+EG LDPV+GR +IERV+Q+L RRTKN
Sbjct: 144 SSEVVSPNHGNPANVN-TPTLDGLARDLTAYAKEGNLDPVIGRSKEIERVIQVLSRRTKN 202
Query: 65 NPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLK 124
NP LIGEPGVGKTAIAEGLAQ+I + ++P+T+ K+V+TLDMG +VAGTKYRGEFE+RLK
Sbjct: 203 NPVLIGEPGVGKTAIAEGLAQKIVANEIPETLRDKRVMTLDMGSVVAGTKYRGEFEDRLK 262
Query: 125 KLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRK 184
K+M+EI+Q+ I+LFIDE+HTLIGAG AEGAIDA+NILKP+LARGELQCIGATTLDEYRK
Sbjct: 263 KIMDEIRQAGNIVLFIDELHTLIGAGGAEGAIDASNILKPALARGELQCIGATTLDEYRK 322
Query: 185 HIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYI 244
+IEKD ALERRFQP+ V +PS DE IQIL GLR+RYE HH+++ TDEA+ A +LS +YI
Sbjct: 323 YIEKDAALERRFQPITVDQPSPDEAIQILHGLRDRYEAHHRVKITDEAIEQAVKLSDRYI 382
Query: 245 SDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGEL 304
+DRFLPDKAIDLIDEA S+VRLR +P + ++LE L I KEK+ AV+ Q+FEKA L
Sbjct: 383 TDRFLPDKAIDLIDEASSKVRLRSYTVPPDLKKLESRLEDIRKEKDAAVQSQEFEKAASL 442
Query: 305 RDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDES 364
RD E L+ ++ + ++ KE + G VT DI +V++WTGIPV K++ +E+
Sbjct: 443 RDTEQKLREELDSTKNEWKE------KQGRTDSEVTPDDIAQVVASWTGIPVVKLAEEET 496
Query: 365 DRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAK 424
RLL+ME LH RVIGQDEAVKA+SRAIRRAR GLK+P RP+ SFIF GPTGVGK+ELA+
Sbjct: 497 QRLLQMESILHDRVIGQDEAVKAVSRAIRRARAGLKDPKRPMGSFIFLGPTGVGKTELAR 556
Query: 425 ALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLF 484
ALA FG E ++IR+DMSE+ME+H+ S+L+G+PPGYVGY EGGQLTE VRR+PY+VVL
Sbjct: 557 ALAESLFGDENSVIRIDMSEYMEKHSTSRLVGAPPGYVGYEEGGQLTEKVRRKPYSVVLL 616
Query: 485 DEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDL 544
DEIEKAHP+VFN++LQ+LEDGRLTDSKGRTVDF+NTL+IMTSNVG+ VI+K +GF
Sbjct: 617 DEIEKAHPEVFNILLQVLEDGRLTDSKGRTVDFRNTLIIMTSNVGADVIKKNS-TLGFTA 675
Query: 545 DYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDR 604
D Y +K V ELK+ FRPEFLNR+DE+IVF L + + +I +M +E+ R
Sbjct: 676 TID-AGKEYGNMKDKVMGELKKSFRPEFLNRIDEIIVFHSLDEAHIGQIVSLMAEELRKR 734
Query: 605 LKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVI 664
LK ++++ +T+ + + +EGY+PS+GARPLRRAI + +ED ++E++L I +GD++
Sbjct: 735 LKEQEVDFVLTDAAKAFLAKEGYDPSFGARPLRRAIQKHIEDRLSEELLRGNISKGDTLT 794
Query: 665 VDVDSDGNVTV 675
+D + DG++ V
Sbjct: 795 ID-EKDGDLVV 804
>gi|253577148|ref|ZP_04854468.1| ATPase AAA-2 domain-containing protein [Paenibacillus sp. oral
taxon 786 str. D14]
gi|251843392|gb|EES71420.1| ATPase AAA-2 domain-containing protein [Paenibacillus sp. oral
taxon 786 str. D14]
Length = 814
Score = 810 bits (2092), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/662 (59%), Positives = 517/662 (78%), Gaps = 9/662 (1%)
Query: 5 STEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKN 64
S+EAV + G ++ N PTL+ +LT A+EG LDPV+GR +IERV+Q+L RRTKN
Sbjct: 144 SSEAVSSHHGTPTNVN-TPTLDSLARDLTAAAKEGNLDPVIGRSKEIERVIQVLSRRTKN 202
Query: 65 NPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLK 124
NP LIGEPGVGKTAIAEGLAQ+I + ++P+T+ K+V+TLDMG +VAGTKYRGEFE+RLK
Sbjct: 203 NPVLIGEPGVGKTAIAEGLAQKIINNEIPETLRDKRVMTLDMGSVVAGTKYRGEFEDRLK 262
Query: 125 KLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRK 184
K+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKP+LARGELQCIGATTLDEYRK
Sbjct: 263 KIMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPALARGELQCIGATTLDEYRK 322
Query: 185 HIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYI 244
+IEKD ALERRFQP+ V +PSV+E IQIL GLR+RYE HH+++ TDEA+ A +LS +YI
Sbjct: 323 YIEKDAALERRFQPITVDQPSVEEAIQILHGLRDRYEAHHRVKITDEAIEQAVKLSDRYI 382
Query: 245 SDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGEL 304
DRFLPDKAIDLIDEAGS+VRL +P ++LE L I KEK+ AV+ Q+FEKA L
Sbjct: 383 QDRFLPDKAIDLIDEAGSKVRLNSYTVPPNLKQLESRLEDIRKEKDAAVQSQEFEKAAAL 442
Query: 305 RDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDES 364
RD E ++ ++ ++ KE + G VT DI +V++WTGIPV K+ +E+
Sbjct: 443 RDTEQKIREELDTTKNQWKE------KQGRTDSEVTPEDIAQVVASWTGIPVNKLKEEET 496
Query: 365 DRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAK 424
+RLL ME+ LH+RVIGQ+EAVKA+SRAIRRAR GLK+P RP+ SFIF GPTGVGK+ELA+
Sbjct: 497 ERLLNMEKILHERVIGQEEAVKAVSRAIRRARAGLKDPKRPMGSFIFLGPTGVGKTELAR 556
Query: 425 ALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLF 484
ALA FG E A+IR+DMSE+ME+H+ ++L+G+PPGYVGY EGGQLTE VRR+PY+VVL
Sbjct: 557 ALAEAMFGDENAVIRIDMSEYMEKHSTARLVGAPPGYVGYEEGGQLTEKVRRKPYSVVLL 616
Query: 485 DEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDL 544
DEIEKAHP+VFN++LQ+LEDGRLTDSKGR VDF+NTL+I+TSNVG+ I++ R+GF
Sbjct: 617 DEIEKAHPEVFNILLQVLEDGRLTDSKGRVVDFRNTLIILTSNVGADAIKR-NTRLGFTA 675
Query: 545 DYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDR 604
D + Y +K V EELK+ FRPEFLNR+DE+IVF L + + +I +M +E+ R
Sbjct: 676 VQD-AGADYENMKGKVMEELKKSFRPEFLNRIDEIIVFHSLEEQHIGQIVTLMSEELRKR 734
Query: 605 LKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVI 664
L+ D++ +T+R + + + GY+P+YGARPLRRAI + +ED ++E++L +K+GDS+
Sbjct: 735 LREYDVDFTLTDRAKAFLAKVGYDPAYGARPLRRAIQKHIEDRLSEELLTGNVKKGDSLT 794
Query: 665 VD 666
+D
Sbjct: 795 ID 796
>gi|138893757|ref|YP_001124210.1| negative regulator of genetic competence ClpC/MecB [Geobacillus
thermodenitrificans NG80-2]
gi|196251133|ref|ZP_03149812.1| ATPase AAA-2 domain protein [Geobacillus sp. G11MC16]
gi|134265270|gb|ABO65465.1| Negative regulator of genetic competence ClpC/MecB [Geobacillus
thermodenitrificans NG80-2]
gi|196209374|gb|EDY04154.1| ATPase AAA-2 domain protein [Geobacillus sp. G11MC16]
Length = 811
Score = 810 bits (2092), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/655 (60%), Positives = 519/655 (79%), Gaps = 10/655 (1%)
Query: 23 PTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEG 82
PTL+ +LT +A EG+LDPV+GR +I+RV+++L RRTKNNP LIGEPGVGKTAIAEG
Sbjct: 162 PTLDSLARDLTAIAREGRLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEG 221
Query: 83 LAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDE 142
LAQ+I + +VP+T+ K+V+TLDMG +VAGTKYRGEFE+RLKK+M+EI+Q+ IILFIDE
Sbjct: 222 LAQQIVNNEVPETLRDKRVMTLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDE 281
Query: 143 VHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVP 202
+HTLIGAG AEGAIDA+NILKP+LARGELQCIGATTLDEYRK+IEKD ALERRFQP+ V
Sbjct: 282 LHTLIGAGGAEGAIDASNILKPALARGELQCIGATTLDEYRKYIEKDAALERRFQPIHVD 341
Query: 203 EPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGS 262
EP+V+E+IQILKGLR+RYE HH++ +DEA+V A +LS +YI+DRFLPDKAIDLIDEA S
Sbjct: 342 EPTVEESIQILKGLRDRYEAHHRVSISDEAIVQAVKLSDRYITDRFLPDKAIDLIDEACS 401
Query: 263 RVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKG 322
+VRLR P + +ELE++L ++ KEK+ AV+ Q+FEKA LRD E L+ ++
Sbjct: 402 KVRLRSFTAPPKLKELEQKLEEVRKEKDAAVQSQEFEKAASLRDMEQRLREELEETKRAW 461
Query: 323 KEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQD 382
KE + G VT DI +VS+WTGIPV K++ E++RLLK+EE LH RV+GQD
Sbjct: 462 KE------KQGQENSEVTVEDIAAVVSSWTGIPVSKLAETETERLLKLEEILHARVVGQD 515
Query: 383 EAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDM 442
EAVKA+++A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+ALA FG E+A+IR+DM
Sbjct: 516 EAVKAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAEAMFGDEDALIRIDM 575
Query: 443 SEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQIL 502
SE+ME+H+ S+LIGSPPGYVGY EGGQLTE VRR+PY+VVL DE+EKAHPDVFN++LQ+L
Sbjct: 576 SEYMEKHSTSRLIGSPPGYVGYEEGGQLTEKVRRKPYSVVLLDEMEKAHPDVFNILLQVL 635
Query: 503 EDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTE 562
EDGRLTDSKGRTVDF+NT++IMTSNVG+ +++ + +GF++ + + Y +K V +
Sbjct: 636 EDGRLTDSKGRTVDFRNTIIIMTSNVGADALKR-NKYVGFNI--QDGNQQYKDMKGKVMD 692
Query: 563 ELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERV 622
ELK+ FRPEFLNR+DE+IVF L K +K+I +M + RLK +DI+L++TE E++
Sbjct: 693 ELKKAFRPEFLNRIDEIIVFHSLEKDHLKQIVRLMADTLVKRLKEQDIDLELTEAAIEKI 752
Query: 623 VEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTVLN 677
EG++ YGARPLRRA+ + +ED ++E++L I +G V VDV DG VL+
Sbjct: 753 AAEGFDLEYGARPLRRALQKHIEDRLSEELLKGTIAKGQKVAVDV-KDGEFVVLS 806
>gi|392392052|ref|YP_006428654.1| chaperone ATPase [Desulfitobacterium dehalogenans ATCC 51507]
gi|390523130|gb|AFL98860.1| ATPase with chaperone activity, ATP-binding subunit
[Desulfitobacterium dehalogenans ATCC 51507]
Length = 826
Score = 810 bits (2092), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/650 (61%), Positives = 518/650 (79%), Gaps = 11/650 (1%)
Query: 23 PTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEG 82
P L E+G +LT+ A +GKLDPVVGR+ +IERVVQ+L RRTKNNP LIGEPGVGKTAIAEG
Sbjct: 169 PALNEFGRDLTQQARDGKLDPVVGREDEIERVVQVLSRRTKNNPVLIGEPGVGKTAIAEG 228
Query: 83 LAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDE 142
LAQRI S VP+T+ GK+V+TLD+ +VAG+KYRGEFEERLKK+MEEI+ II+FIDE
Sbjct: 229 LAQRIVSNKVPETLAGKRVVTLDLSAVVAGSKYRGEFEERLKKVMEEIRVDGRIIVFIDE 288
Query: 143 VHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVP 202
+HTLIGAGAAEGAIDAANILKP+LARGELQCIGATTLDEYRK+IEKDPALERRFQP+ V
Sbjct: 289 LHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKYIEKDPALERRFQPITVG 348
Query: 203 EPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGS 262
EP+V++ IQIL GLR+RYE HH+ + TDEA+ +A ++S +YISDRFLPDKAIDL+DEA S
Sbjct: 349 EPTVEQAIQILFGLRDRYEAHHRTKITDEAVEAAVKMSDRYISDRFLPDKAIDLMDEAAS 408
Query: 263 RVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKG 322
RVRL P + + LE+++ + EK AV Q+FEKA + RD E L+ ++S L +
Sbjct: 409 RVRLAAFTAPPDLKSLEEKIETLKGEKEAAVLSQEFEKAAKFRDEEHQLREELSQLRNTW 468
Query: 323 KEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQD 382
+ SK + + VT DI IV++WTGIPV+K++ +ES+RLL +EETLH+RV+GQ+
Sbjct: 469 E--SKRDVNQSE----VTADDIAQIVASWTGIPVKKLAQEESERLLGLEETLHQRVVGQE 522
Query: 383 EAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDM 442
+AVKA+SRA+RRAR GLK+P RP+ SFIF GPTGVGK+ELA+AL+ FG E+A+IR+DM
Sbjct: 523 DAVKAVSRAVRRARAGLKDPKRPVGSFIFLGPTGVGKTELARALSEALFGEEDALIRIDM 582
Query: 443 SEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQIL 502
SE+ME+H VS+L+G+PPGY+G+ EGGQLTEAVRR+PY+V+L DEIEKAHP+VFN++LQ+L
Sbjct: 583 SEYMEKHAVSRLVGAPPGYIGHDEGGQLTEAVRRKPYSVILLDEIEKAHPEVFNILLQVL 642
Query: 503 EDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTE 562
EDGRLTD+KGRTVDF+N ++IMTSNVG+S + K +GF DE ++ Y + S V E
Sbjct: 643 EDGRLTDTKGRTVDFRNAVIIMTSNVGASFMRKEA--LGFASRRDE-ETEYKNMSSRVME 699
Query: 563 ELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERV 622
ELK+ FRPEFLNR+DE++VF L + +I +I++K+V RLK + +LQV + E +
Sbjct: 700 ELKRTFRPEFLNRVDEIVVFHSLQAEGLMKITEILMKQVNGRLKEQGYDLQVEKSALELI 759
Query: 623 VEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGN 672
+EG +P++GARPLRRAI RL+EDS++EK+L E K GD + V+ +GN
Sbjct: 760 AKEGNDPAFGARPLRRAIQRLIEDSLSEKILLGEFKSGDK--IKVEEEGN 807
>gi|331268385|ref|YP_004394877.1| ATPase AAA-2 domain-containing protein [Clostridium botulinum
BKT015925]
gi|329124935|gb|AEB74880.1| ATPase AAA-2 domain protein [Clostridium botulinum BKT015925]
Length = 813
Score = 809 bits (2090), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/648 (59%), Positives = 517/648 (79%), Gaps = 7/648 (1%)
Query: 23 PTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEG 82
PTL++YG +LT +A +GKLDPV+GR + ERV++IL RR KNNPCLIG+PGVGKTAIAEG
Sbjct: 165 PTLDKYGRDLTNMAIDGKLDPVIGRDSETERVLEILCRRIKNNPCLIGDPGVGKTAIAEG 224
Query: 83 LAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDE 142
LAQRI SG++P+ ++ K+V+TLD+ +VAG+KYRGEFE+R+KK+M+EI + +ILFIDE
Sbjct: 225 LAQRIVSGNIPEILKDKRVVTLDISSMVAGSKYRGEFEDRVKKVMDEIYKDGNVILFIDE 284
Query: 143 VHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVP 202
+HT++GAG AEGAIDA+NILKP+LARGELQCIGATT+DEYRK+IEKD ALERRFQPV V
Sbjct: 285 IHTIVGAGGAEGAIDASNILKPALARGELQCIGATTIDEYRKYIEKDSALERRFQPVNVG 344
Query: 203 EPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGS 262
EP+ +E+IQILKGLR++YE HH ++ TDEA+ +A +LS +YI+DR+LPDKAIDLIDEAG+
Sbjct: 345 EPTKEESIQILKGLRDKYEAHHGVKITDEAIQAAVELSDRYITDRYLPDKAIDLIDEAGA 404
Query: 263 RVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKG 322
+VR+++ P + + LE+EL ++ KEK +A+ QDFEKA LRD E +LK ++ +
Sbjct: 405 KVRIKNLTAPPDLKGLEEELEKVGKEKEDAITVQDFEKAASLRDTEKELKDKLKDFKNNW 464
Query: 323 KEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQD 382
K+ S+ T+ +V++ I +VS W+ +P+EK++ E+DRLLK+EE LHKRVIGQ+
Sbjct: 465 KKKSQVATQ------IVSKEQIAQVVSTWSNVPIEKLTEKEADRLLKLEEILHKRVIGQN 518
Query: 383 EAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDM 442
EAVK+I++A+RRARVGLK+P RPI SFIF GPTGVGK+EL+KALA FG E MIR+DM
Sbjct: 519 EAVKSIAKAVRRARVGLKDPKRPIGSFIFLGPTGVGKTELSKALAEAMFGDENNMIRVDM 578
Query: 443 SEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQIL 502
SE+ME+H VS+L+GSPPGYVG+ EGGQLTE VRR PY+VVLFDEIEKAHP+VFN++LQIL
Sbjct: 579 SEYMEKHAVSRLVGSPPGYVGHDEGGQLTEKVRRNPYSVVLFDEIEKAHPEVFNILLQIL 638
Query: 503 EDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTE 562
EDGRLTDSKG+TVDF+NT++I+TSNVG+S I K +GF DE + Y R+K V
Sbjct: 639 EDGRLTDSKGKTVDFRNTIIILTSNVGASTINKQN-TLGFSNSEDEAEDEYERMKDNVMV 697
Query: 563 ELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERV 622
ELK+ FRPEFLNR+D++IVF L + ++KEI +ML+EV RLK +++ ++ E+ + +
Sbjct: 698 ELKRSFRPEFLNRIDDIIVFHTLNQEDLKEIVKLMLEEVSGRLKNREVYIEFDEKAEKLL 757
Query: 623 VEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSD 670
+G++ +YGARPLRR I + +ED ++E++L IK+GD V V D
Sbjct: 758 SSKGFDSAYGARPLRRTITKTVEDKLSEEILKGIIKKGDHVKATVKDD 805
>gi|314932748|ref|ZP_07840117.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
caprae C87]
gi|313654429|gb|EFS18182.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
caprae C87]
Length = 817
Score = 809 bits (2090), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/655 (59%), Positives = 512/655 (78%), Gaps = 9/655 (1%)
Query: 16 GSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVG 75
+ N PTL+ +LT +A++G LDPVVGR +I RV+++L RRTKNNP LIGEPGVG
Sbjct: 154 ANKSNNTPTLDSLARDLTVIAKDGTLDPVVGRDKEITRVIEVLSRRTKNNPVLIGEPGVG 213
Query: 76 KTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDE 135
KTAIAEGLAQ I + +VP+T++ K+V++LDMG +VAGTKYRGEFEERLKK+MEEI Q+
Sbjct: 214 KTAIAEGLAQAIVNNEVPETLKDKRVMSLDMGTVVAGTKYRGEFEERLKKVMEEIHQAGN 273
Query: 136 IILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERR 195
+ILFIDE+HTL+GAG AEGAIDA+NILKP+LARGELQCIGATTLDEYRK+IEKD ALERR
Sbjct: 274 VILFIDELHTLVGAGGAEGAIDASNILKPALARGELQCIGATTLDEYRKNIEKDAALERR 333
Query: 196 FQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAID 255
FQPV+V EP+V++TI+ILKGLR+RYE HH++ +DEAL +AA+LS +Y+SDRFLPDKAID
Sbjct: 334 FQPVQVDEPTVEDTIEILKGLRDRYEAHHRINISDEALEAAAKLSNRYVSDRFLPDKAID 393
Query: 256 LIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQI 315
LIDEA S+VRL+ P +E+E+E+ + EK+ AV Q+FE A LRD++ L+ Q
Sbjct: 394 LIDEASSKVRLKSHTTPNNLKEIEQEIENVKNEKDAAVHAQEFENAANLRDKQSKLEKQY 453
Query: 316 SALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLH 375
++ K G V ++E DI +++ WTGIP+ K++ ES RLL +E+TLH
Sbjct: 454 EEAKNEWK------NSQGGVSTALSEEDIAEVIAGWTGIPLTKINETESGRLLNLEDTLH 507
Query: 376 KRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEE 435
RVIGQ++AV +IS+A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+ALA FG ++
Sbjct: 508 NRVIGQNDAVNSISKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGEDD 567
Query: 436 AMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVF 495
AMIR+DMSEFME+H VS+L+G+PPGYVG+ +GGQLTE VRR+PY+V+LFDEIEKAHPDVF
Sbjct: 568 AMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKVRRKPYSVILFDEIEKAHPDVF 627
Query: 496 NMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNR 555
N++LQ+L+DG LTD+KGRTVDF+NT++IMTSNVG+ ++ R GF + D Y
Sbjct: 628 NILLQVLDDGHLTDTKGRTVDFRNTIIIMTSNVGAQELQD-QRFAGFGGASEGND--YET 684
Query: 556 IKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVT 615
I+ + +ELK FRPEFLNR+D++IVF +L+K E+KEI +M+K++ DRL ++I + VT
Sbjct: 685 IRKTMMKELKNSFRPEFLNRVDDIIVFHKLSKEELKEIVTMMVKKLTDRLSEQNINISVT 744
Query: 616 ERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSD 670
++ +E++ EEGY+P YGARPL RAI + +ED+++E +L EG V +D D D
Sbjct: 745 DKAKEKIAEEGYDPEYGARPLIRAIQKTVEDNLSELILDGNQIEGKEVTIDHDGD 799
>gi|299541899|ref|ZP_07052222.1| negative regulator of genetic competence clpC/mecB [Lysinibacillus
fusiformis ZC1]
gi|424739339|ref|ZP_18167758.1| negative regulator of genetic competence clpC/mecB [Lysinibacillus
fusiformis ZB2]
gi|298725637|gb|EFI66278.1| negative regulator of genetic competence clpC/mecB [Lysinibacillus
fusiformis ZC1]
gi|422946736|gb|EKU41142.1| negative regulator of genetic competence clpC/mecB [Lysinibacillus
fusiformis ZB2]
Length = 814
Score = 809 bits (2090), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/648 (61%), Positives = 514/648 (79%), Gaps = 9/648 (1%)
Query: 23 PTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEG 82
PTL+ +LT++A EG LDPV+GR +I RV+++L RRTKNNP LIGEPGVGKTAIAEG
Sbjct: 162 PTLDSLARDLTQIAREGTLDPVIGRSKEITRVIEVLSRRTKNNPVLIGEPGVGKTAIAEG 221
Query: 83 LAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDE 142
LAQ+I + +VP+ + K+V+TLDMG +VAGTKYRGEFE+RLKK+M+EI+Q+ IILFIDE
Sbjct: 222 LAQQIINNEVPEILRDKRVMTLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDE 281
Query: 143 VHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVP 202
+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTLDEYRK+IEKD ALERRFQP++V
Sbjct: 282 LHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEYRKYIEKDAALERRFQPIQVD 341
Query: 203 EPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGS 262
EP+V+E I I++GLR+RYE HH+++ TDEA+ +AA++S +YISDRFLPDKAIDLIDEAGS
Sbjct: 342 EPTVEEAILIIQGLRDRYEAHHRVKITDEAIEAAAKMSDRYISDRFLPDKAIDLIDEAGS 401
Query: 263 RVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKG 322
+VRLR +P + LE +L + EKN AV GQ+FEKA LRD E LK +I A
Sbjct: 402 KVRLRSFAVPPNLKALEDKLENVRSEKNAAVSGQEFEKAAALRDTEQKLKDEIEATRKNW 461
Query: 323 KEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQD 382
KE E G VT D+ +VS WTGIPV K++++ES +LL++EE LHKRV+GQ
Sbjct: 462 KE------EQGKAESKVTVDDVAAVVSMWTGIPVAKIASEESSKLLQLEEELHKRVVGQG 515
Query: 383 EAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDM 442
EAV+AISRAIRRAR GLK+P RPI SFIF GPTGVGK+ELA+ALA FG E+AMIR+DM
Sbjct: 516 EAVEAISRAIRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAEVMFGDEDAMIRVDM 575
Query: 443 SEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQIL 502
SE+ME+H+ S+L+GSPPGYVG+ +GGQLTE VRR+PY+VVL DEIEKAHPDVFN++LQ+L
Sbjct: 576 SEYMEKHSTSRLVGSPPGYVGFDDGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVL 635
Query: 503 EDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTE 562
EDGRLTDSKGR VDF+NT++IMTSNVG+ + K + +GF++ E S + +K + E
Sbjct: 636 EDGRLTDSKGRVVDFRNTVVIMTSNVGADAL-KYQKNLGFNVGGAE--SKHKDMKGTMLE 692
Query: 563 ELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERV 622
ELK+ FRPEFLNR+DEMIVF L K +KEI +M + RLK +DI L++T+ E++
Sbjct: 693 ELKKAFRPEFLNRIDEMIVFHALEKEHLKEIIAMMGNALTKRLKEQDISLELTDAALEKI 752
Query: 623 VEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSD 670
EEGY+P YGARPLRRA+ + +ED ++E++L +++G+ V++D +D
Sbjct: 753 AEEGYDPQYGARPLRRALQKQVEDRLSEELLKGNVEKGNQVVIDYVND 800
>gi|337751755|ref|YP_004645917.1| protein ClpC [Paenibacillus mucilaginosus KNP414]
gi|336302944|gb|AEI46047.1| ClpC [Paenibacillus mucilaginosus KNP414]
Length = 814
Score = 809 bits (2090), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/671 (59%), Positives = 520/671 (77%), Gaps = 10/671 (1%)
Query: 5 STEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKN 64
S+E V G ++ N PTL+ +LT A+EG LDPV+GR +IERV+Q+L RRTKN
Sbjct: 144 SSEVVSPNHGNPANVN-TPTLDGLARDLTAYAKEGNLDPVIGRSKEIERVIQVLSRRTKN 202
Query: 65 NPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLK 124
NP LIGEPGVGKTAIAEGLAQ+I + ++P+T+ K+V+TLDMG +VAGTKYRGEFE+RLK
Sbjct: 203 NPVLIGEPGVGKTAIAEGLAQKIVANEIPETLRDKRVMTLDMGSVVAGTKYRGEFEDRLK 262
Query: 125 KLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRK 184
K+M+EI+Q+ I+LFIDE+HTLIGAG AEGAIDA+NILKP+LARGELQCIGATTLDEYRK
Sbjct: 263 KIMDEIRQAGNIVLFIDELHTLIGAGGAEGAIDASNILKPALARGELQCIGATTLDEYRK 322
Query: 185 HIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYI 244
+IEKD ALERRFQP+ V +PS DE IQIL GLR+RYE HH+++ TDEA+ A +LS +YI
Sbjct: 323 YIEKDAALERRFQPITVDQPSPDEAIQILHGLRDRYEAHHRVKITDEAIEQAVKLSDRYI 382
Query: 245 SDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGEL 304
DRFLPDKAIDLIDEA S+VRLR +P + ++LE L I KEK+ AV+ Q+FEKA L
Sbjct: 383 PDRFLPDKAIDLIDEASSKVRLRSYTVPPDLKKLESRLEDIRKEKDAAVQSQEFEKAASL 442
Query: 305 RDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDES 364
RD E L+ ++ + ++ KE + G VT DI +V++WTGIPV K++ +E+
Sbjct: 443 RDTEQKLREELDSTKNEWKE------KQGRTDSEVTPDDIAQVVASWTGIPVVKLAEEET 496
Query: 365 DRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAK 424
RLL+ME LH RVIGQDEAVKA+SRAIRRAR GLK+P RP+ SFIF GPTGVGK+ELA+
Sbjct: 497 QRLLQMESILHDRVIGQDEAVKAVSRAIRRARAGLKDPKRPMGSFIFLGPTGVGKTELAR 556
Query: 425 ALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLF 484
ALA FG E ++IR+DMSE+ME+H+ S+L+G+PPGYVGY EGGQLTE VRR+PY+VVL
Sbjct: 557 ALAESLFGDENSVIRIDMSEYMEKHSTSRLVGAPPGYVGYEEGGQLTEKVRRKPYSVVLL 616
Query: 485 DEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDL 544
DEIEKAHP+VFN++LQ+LEDGRLTDSKGRTVDF+NTL+IMTSNVG+ VI+K +GF
Sbjct: 617 DEIEKAHPEVFNILLQVLEDGRLTDSKGRTVDFRNTLIIMTSNVGADVIKKNS-TLGFTA 675
Query: 545 DYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDR 604
D Y +K V ELK+ FRPEFLNR+DE+IVF L + + +I +M +E+ R
Sbjct: 676 TID-AGKEYGNMKDKVMGELKKSFRPEFLNRIDEIIVFHSLDEAHIGQIVSLMAEELRKR 734
Query: 605 LKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVI 664
LK ++++ +T+ + + +EGY+PS+GARPLRRAI + +ED ++E++L I +GD++
Sbjct: 735 LKEQEVDFVLTDAAKAFLAKEGYDPSFGARPLRRAIQKHIEDRLSEELLRGNISKGDTLT 794
Query: 665 VDVDSDGNVTV 675
+D + DG++ V
Sbjct: 795 ID-EKDGDLVV 804
>gi|427421597|ref|ZP_18911780.1| ATPase with chaperone activity, ATP-binding subunit [Leptolyngbya
sp. PCC 7375]
gi|425757474|gb|EKU98328.1| ATPase with chaperone activity, ATP-binding subunit [Leptolyngbya
sp. PCC 7375]
Length = 820
Score = 809 bits (2089), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/653 (62%), Positives = 516/653 (79%), Gaps = 18/653 (2%)
Query: 25 LEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLA 84
L E+ T+LT+LA GKLDPV+GR +IERVVQILGRRTKNNP L+GEPGVGKTAIAEGLA
Sbjct: 171 LAEFSTDLTELAANGKLDPVIGRFEEIERVVQILGRRTKNNPVLVGEPGVGKTAIAEGLA 230
Query: 85 QRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVH 144
QRI + DVP+ + ++VI+LD+ +LV+GT++RG+FEERL ++M E++++ IIL IDE+H
Sbjct: 231 QRIVNQDVPEALFDRRVISLDLAMLVSGTRFRGDFEERLNQVMSEVREAQNIILVIDEIH 290
Query: 145 TLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEP 204
TL+GAG+ EG++DAAN+LKP+LARGELQCIGATTL+EYRK+IEKD ALERRFQ V V P
Sbjct: 291 TLVGAGSLEGSMDAANLLKPALARGELQCIGATTLEEYRKYIEKDAALERRFQRVTVAPP 350
Query: 205 SVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRV 264
SV++T++IL G+R RYE H+L TDEAL +AA L+ +YI+DR+LPDKAIDLIDEAGSRV
Sbjct: 351 SVEDTLEILGGIRGRYEQFHRLTITDEALEAAATLADRYINDRYLPDKAIDLIDEAGSRV 410
Query: 265 RLRHAQ-LPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGK 323
RLR++Q +P A E ELRQ+ + E + Q F LR +E L A++
Sbjct: 411 RLRYSQKIP--AGEKRTELRQVQGKIMELLESQAFNDVAALRAKEQGLLAEL-------- 460
Query: 324 EMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDE 383
G P VT DI IVSAWTG+PV ++S ES +L +E+TLH+RVIGQ+E
Sbjct: 461 ------VPNGTPHPEVTNEDIADIVSAWTGVPVNRLSESESAMILHLEDTLHERVIGQNE 514
Query: 384 AVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMS 443
AV+A+++A+RR+RVG++NPNRPIAS IFSGPTGVGK+ELAKALAA FG+E+AMIR+DMS
Sbjct: 515 AVEAVAKAVRRSRVGMRNPNRPIASLIFSGPTGVGKTELAKALAASVFGAEDAMIRVDMS 574
Query: 444 EFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILE 503
EFME +VSKLIGSPPGYVGY EGGQLTEAVRR+PYTV+L DEIEKAHPDVFN++LQ+L+
Sbjct: 575 EFMEPQSVSKLIGSPPGYVGYDEGGQLTEAVRRKPYTVILLDEIEKAHPDVFNILLQLLD 634
Query: 504 DGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDY-DEKDSSYNRIKSLVTE 562
DG L D+KGR V FKNTL+IMTSN+GS VIEKGG +GF+L DE S YN I++LV E
Sbjct: 635 DGHLNDAKGRKVSFKNTLIIMTSNIGSKVIEKGGGGLGFELSTDDEMTSRYNNIRNLVNE 694
Query: 563 ELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERV 622
E+KQ+FRPE LNR+DE+IVFRQL K EV +IADI+L +V RL ++I ++T+ FRE +
Sbjct: 695 EMKQFFRPELLNRIDEIIVFRQLIKQEVAQIADILLAQVTGRLAERNITFELTDAFREHL 754
Query: 623 VEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTV 675
V EGY+ +YGARP+RRAI RL+ED +AE +LA I +GD+ + D+D D V V
Sbjct: 755 VNEGYDQTYGARPMRRAISRLVEDYLAEALLAGTITDGDTAVFDLDDDARVLV 807
>gi|442803766|ref|YP_007371915.1| chaperone protein ClpB [Clostridium stercorarium subsp.
stercorarium DSM 8532]
gi|442739616|gb|AGC67305.1| chaperone protein ClpB [Clostridium stercorarium subsp.
stercorarium DSM 8532]
Length = 810
Score = 809 bits (2089), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/651 (59%), Positives = 520/651 (79%), Gaps = 9/651 (1%)
Query: 21 KMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIA 80
+ PTL+++G +LT +A EGK+DPV+GR +IER++QIL RRTKNNPCLIGEPGVGKTAI
Sbjct: 161 QTPTLDQFGRDLTAMAREGKIDPVIGRDKEIERIIQILSRRTKNNPCLIGEPGVGKTAIC 220
Query: 81 EGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFI 140
EGLAQ+I G++P+ ++GK+V+ LD+ +VAG KYRGEFEERLKK +EE++ + +ILFI
Sbjct: 221 EGLAQKIIEGNIPEILKGKRVVALDLSSMVAGAKYRGEFEERLKKSIEEVRNAGNVILFI 280
Query: 141 DEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVK 200
DE+HT++GAGAAEGAIDA+NILKP LARGE+Q IGATT+DEYRK+IEKD ALERRFQP++
Sbjct: 281 DELHTIVGAGAAEGAIDASNILKPLLARGEIQVIGATTIDEYRKYIEKDAALERRFQPIQ 340
Query: 201 VPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEA 260
+ EP+ +E I+ILKG+R++YE HH ++ TD+A+ +A +LS +YI+DRFLPDKAIDLIDEA
Sbjct: 341 IGEPTQEEAIEILKGIRDKYEAHHNVKITDKAIEAAVRLSVRYITDRFLPDKAIDLIDEA 400
Query: 261 GSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVD 320
S+VRL+ P + +ELE+++ Q+ K K +A+ Q+FEKA LRD+E LK Q+++L +
Sbjct: 401 ASKVRLKSFIAPPDLKELEQKIEQVHKMKEDAIINQEFEKAASLRDQENALKEQMNSLKE 460
Query: 321 KGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIG 380
K + ++ ET++ VTE +I +VS+WTGIPV +++ +E+++L +E LHKRVIG
Sbjct: 461 KWRMKNQTETQS------VTEEEIAEVVSSWTGIPVSRLAQEETEKLKNLENVLHKRVIG 514
Query: 381 QDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRL 440
QDEAVKA+++AIRR RVGLK+P RP+ SFIF GPTGVGK+EL+KALA FG E MIRL
Sbjct: 515 QDEAVKAVAKAIRRGRVGLKDPKRPVGSFIFLGPTGVGKTELSKALAEALFGDESHMIRL 574
Query: 441 DMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQ 500
DMSE+ME+HTVS+L+GSPPGYVGY EGGQLTE VRR+PY+VVLFDEIEKAHPDVFN++LQ
Sbjct: 575 DMSEYMEKHTVSRLVGSPPGYVGYEEGGQLTEKVRRKPYSVVLFDEIEKAHPDVFNILLQ 634
Query: 501 ILEDGRLTDSKGRTVDFKNTLLIMTSNVGS-SVIEKGGRRIGFDLDYDEKDSSYNRIKSL 559
IL+DGRLTD+ GR VDF+NT++IMTSN+G+ ++E R++GF + + Y +K
Sbjct: 635 ILDDGRLTDASGRLVDFRNTVIIMTSNIGARDIVEP--RKLGFSAALENEAKDYEEMKKN 692
Query: 560 VTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFR 619
V ELK+ FRPEFLNR+DE+IVF LT+ + +IA +ML EV RLK +I L ++ +
Sbjct: 693 VMNELKKTFRPEFLNRVDELIVFHPLTRENINDIAGLMLNEVAKRLKNVNITLIADDQVK 752
Query: 620 ERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSD 670
E + E+GY+ YGARPLRR I L+ED +AE+ML +I+EGD+V + +++D
Sbjct: 753 EFLAEKGYDKVYGARPLRRTIQNLVEDRIAEEMLDGKIREGDTVKIVLNND 803
>gi|169830065|ref|YP_001700223.1| negative regulator of genetic competence clpC/mecB [Lysinibacillus
sphaericus C3-41]
gi|168994553|gb|ACA42093.1| Negative regulator of genetic competence clpC/mecB [Lysinibacillus
sphaericus C3-41]
Length = 813
Score = 809 bits (2089), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/648 (61%), Positives = 514/648 (79%), Gaps = 9/648 (1%)
Query: 23 PTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEG 82
PTL+ +LT++A EG LDPV+GR +I RV+++L RRTKNNP LIGEPGVGKTAIAEG
Sbjct: 161 PTLDSLARDLTQIAREGTLDPVIGRSKEITRVIEVLSRRTKNNPVLIGEPGVGKTAIAEG 220
Query: 83 LAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDE 142
LAQ+I + +VP+ + K+V+TLDMG +VAGTKYRGEFE+RLKK+M+EI+Q+ IILFIDE
Sbjct: 221 LAQQIINNEVPEILRDKRVMTLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDE 280
Query: 143 VHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVP 202
+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTLDEYRK+IEKD ALERRFQP++V
Sbjct: 281 LHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEYRKYIEKDAALERRFQPIQVD 340
Query: 203 EPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGS 262
EP+V+E I I++GLR+RYE HH+++ TDEA+ +AA++ +YISDRFLPDKAIDLIDEAGS
Sbjct: 341 EPTVEEAILIIQGLRDRYEAHHRVKITDEAIEAAAKMGDRYISDRFLPDKAIDLIDEAGS 400
Query: 263 RVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKG 322
+VRLR +P + LE +L + EKN AV GQ+FEKA LRD E LK +I A
Sbjct: 401 KVRLRSFAVPPNLKALEDKLENVRSEKNAAVSGQEFEKAAALRDTEQKLKDEIEATRKNW 460
Query: 323 KEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQD 382
KE E G VT D+ +VS WTGIPV K++++ES +LL++EE LHKRV+GQ
Sbjct: 461 KE------EQGKAESKVTVDDVAAVVSMWTGIPVAKIASEESSKLLQLEEELHKRVVGQG 514
Query: 383 EAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDM 442
EAV+AISRAIRRAR GLK+P RPI SFIF GPTGVGK+ELA+ALA FG E+AMIR+DM
Sbjct: 515 EAVEAISRAIRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAEVMFGDEDAMIRVDM 574
Query: 443 SEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQIL 502
SE+ME+H+ S+L+GSPPGYVG+ +GGQLTE VRR+PY+VVL DEIEKAHPDVFN++LQ+L
Sbjct: 575 SEYMEKHSTSRLVGSPPGYVGFDDGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVL 634
Query: 503 EDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTE 562
EDGRLTDSKGR VDF+NT++IMTSNVG+ + K + +GF++ DS + +KS + E
Sbjct: 635 EDGRLTDSKGRVVDFRNTVVIMTSNVGADAL-KYQKSLGFNVGG--ADSKHKDMKSTMLE 691
Query: 563 ELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERV 622
ELK+ FRPEFLNR+DEMIVF L K +KEI +M + RLK +DI L++T+ E++
Sbjct: 692 ELKKAFRPEFLNRIDEMIVFHSLEKEHLKEIIAMMGNALTKRLKEQDISLELTDAALEKI 751
Query: 623 VEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSD 670
+EGY+P YGARPLRRA+ + +ED ++E++L +++G+ VI+D +D
Sbjct: 752 AQEGYDPQYGARPLRRALQKQVEDRLSEELLKGNVEKGNHVIIDYVND 799
>gi|296271367|ref|YP_003653999.1| ATPase AAA-2 domain-containing protein [Thermobispora bispora DSM
43833]
gi|296094154|gb|ADG90106.1| ATPase AAA-2 domain protein [Thermobispora bispora DSM 43833]
Length = 834
Score = 808 bits (2088), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/687 (58%), Positives = 536/687 (78%), Gaps = 14/687 (2%)
Query: 4 ESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTK 63
+ E AG S+ + L+++G NLT+ A EGKLDPV+GR+ +IERV+Q+L RRTK
Sbjct: 146 QGKEPAAAGATQESTPSTSLVLDQFGRNLTQAAREGKLDPVIGREKEIERVMQVLSRRTK 205
Query: 64 NNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERL 123
NNP L+GEPGVGKTA+ EGLAQ+I G+VP+T++ K++ TLD+G LVAG++YRG+FEERL
Sbjct: 206 NNPVLVGEPGVGKTAVVEGLAQKIVKGEVPETLKDKQLYTLDLGALVAGSRYRGDFEERL 265
Query: 124 KKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYR 183
+K+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEYR
Sbjct: 266 RKVLKEIRTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIGATTLDEYR 325
Query: 184 KHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQY 243
KH+EKD ALERRFQP++V EPS+ TI+ILKGLR+RYE HH++ TD ALV+AA L+ +Y
Sbjct: 326 KHLEKDAALERRFQPIQVAEPSIAHTIEILKGLRDRYEAHHRVSITDGALVAAATLADRY 385
Query: 244 ISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGE 303
ISDR+LPDKAIDLIDEAGSR+R+R P + RE ++++ +I +EK A+ QDFE+A
Sbjct: 386 ISDRYLPDKAIDLIDEAGSRMRIRRMTAPPDLREYDEQIAKIRREKESAIDAQDFERAAA 445
Query: 304 LRDREMDLKAQISALVDKGKEMSKAETEAGDVGPV--VTEVDIQHIVSAWTGIPVEKVST 361
LRD+E L+ + +E + E +AGD+ V VTE I +++ TGIPV K++
Sbjct: 446 LRDQEKQLQLK--------RERREKEWKAGDMDHVAEVTEELIAEVLATATGIPVFKLTE 497
Query: 362 DESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSE 421
+ES RLL+MEE LHKR+IGQD+A+KA+SRAIRR R GLK+P RP SFIF+GP+GVGK+E
Sbjct: 498 EESQRLLRMEEELHKRIIGQDDAIKALSRAIRRTRAGLKDPRRPGGSFIFAGPSGVGKTE 557
Query: 422 LAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTV 481
L+KALA + FG E+A+I LDMSE+ME+HTVS+L GSPPGYVGY EGGQLTE VRR+P++V
Sbjct: 558 LSKALAEFLFGDEDALIMLDMSEYMEKHTVSRLFGSPPGYVGYEEGGQLTEKVRRKPFSV 617
Query: 482 VLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIG 541
VLFDEIEKAHPD+FN +LQILEDGRLTD++GR VDFKNT++IMT+N+G+ I K G +G
Sbjct: 618 VLFDEIEKAHPDIFNSLLQILEDGRLTDAQGRVVDFKNTVIIMTTNLGTRDISK-GIGVG 676
Query: 542 FDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEV 601
F D+ +++Y+R+K+ V EELKQ+FRPEFLNR+D+++VF QLT+ E+ +I D+M+ V
Sbjct: 677 F-AKSDDTETTYDRMKAKVQEELKQHFRPEFLNRVDDIVVFHQLTQKEIIQIVDLMIARV 735
Query: 602 FDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGD 661
+RLK +D+ L +T+ ++ + E GY+P GARPLRR I R +ED+++EK+L E++ G
Sbjct: 736 DERLKDRDMGLVLTDAAKKLLAERGYDPVMGARPLRRTIQREIEDTLSEKILYGELRPGH 795
Query: 662 SVIVDVDSDGNVT--VLNGSSGAPESL 686
V VDV+ +G V G PE L
Sbjct: 796 IVKVDVEGEGENAKFVFTGEPKPPEVL 822
>gi|251799676|ref|YP_003014407.1| ATPase AAA [Paenibacillus sp. JDR-2]
gi|247547302|gb|ACT04321.1| ATPase AAA-2 domain protein [Paenibacillus sp. JDR-2]
Length = 817
Score = 808 bits (2088), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/683 (58%), Positives = 522/683 (76%), Gaps = 11/683 (1%)
Query: 5 STEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKN 64
S+EAV + G S PTL+ +LT A EG LDPV+GR +IERV+Q+L RRTKN
Sbjct: 144 SSEAVSSS-HGSPSNVSTPTLDGLARDLTAYAREGNLDPVIGRSKEIERVIQVLSRRTKN 202
Query: 65 NPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLK 124
NP LIGEPGVGKTAIAEGLAQ+I + ++P+T+ K+V+TLDMG +VAGTKYRGEFE+RLK
Sbjct: 203 NPVLIGEPGVGKTAIAEGLAQKIIANEIPETLRDKRVMTLDMGSVVAGTKYRGEFEDRLK 262
Query: 125 KLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRK 184
K+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKP+LARGELQCIGATTLDEYRK
Sbjct: 263 KIMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPALARGELQCIGATTLDEYRK 322
Query: 185 HIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYI 244
+IEKD ALERRFQP+ V +PS +E IQIL GLR+RYE HH+++ TD+A+V A +LS +YI
Sbjct: 323 YIEKDAALERRFQPITVDQPSPEEAIQILHGLRDRYEAHHRVKITDDAIVQAVKLSDRYI 382
Query: 245 SDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGEL 304
+DRFLPDKAIDLIDEA S+VRL +P ++LE L I KEK+ AV+ Q+FEKA L
Sbjct: 383 TDRFLPDKAIDLIDEASSKVRLNSYTVPPNLKQLENRLEDIRKEKDAAVQSQEFEKAAAL 442
Query: 305 RDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDES 364
RD E ++ ++ ++ KE + G VT DI +V++WTGIPV K++ +E+
Sbjct: 443 RDTEQKIREELDVTKNQWKE------KQGRTDSEVTPEDIAQVVASWTGIPVSKLAEEET 496
Query: 365 DRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAK 424
+RLLKME+ LH RVIGQ++AVKA+SRAIRRAR GLK+P RPI SFIF GPTGVGK+ELA+
Sbjct: 497 ERLLKMEDILHDRVIGQEDAVKAVSRAIRRARAGLKDPKRPIGSFIFLGPTGVGKTELAR 556
Query: 425 ALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLF 484
ALA FG E A+IR+DMSE+ME+H+ S+L+G+PPGYVGY EGGQLTE VRR+PY+VVL
Sbjct: 557 ALAEAMFGDENAVIRIDMSEYMEKHSTSRLVGAPPGYVGYEEGGQLTEKVRRKPYSVVLL 616
Query: 485 DEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDL 544
DEIEKAHP+VFN++LQ+LEDGRLTDSKGR VDF+NTL+IMTSNVG+ I++ +GF
Sbjct: 617 DEIEKAHPEVFNILLQVLEDGRLTDSKGRVVDFRNTLIIMTSNVGADQIKRNS-SLGFTA 675
Query: 545 DYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDR 604
D +N++K V ELK+ FRPEFLNR+DE IVF L + + +I +M E+ R
Sbjct: 676 VQD-SGREFNQMKDKVMTELKKSFRPEFLNRIDETIVFHSLEQEHIAQIVTLMSDELRKR 734
Query: 605 LKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVI 664
L+ ++++ +T+ + + +EG++P YGARPLRRAI + +ED ++E +L +I++GDS
Sbjct: 735 LREQEVDFILTDSAKAFLAKEGFDPQYGARPLRRAIQKHIEDRLSEDLLLGKIRKGDSFT 794
Query: 665 VDVDSDGNVTVLNGSSGAPESLA 687
+D + DG +TV N S PE A
Sbjct: 795 ID-EKDGGLTV-NKSEAVPEEPA 815
>gi|443662998|ref|ZP_21133044.1| clp amino terminal domain protein [Microcystis aeruginosa
DIANCHI905]
gi|159028807|emb|CAO89978.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
gi|443332002|gb|ELS46635.1| clp amino terminal domain protein [Microcystis aeruginosa
DIANCHI905]
Length = 795
Score = 808 bits (2088), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 394/651 (60%), Positives = 501/651 (76%), Gaps = 45/651 (6%)
Query: 25 LEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLA 84
L +YG NL++ + GK+DPV+GR+P+IERVVQILGRRTK+NP L+G PGVGKTAIAEGLA
Sbjct: 169 LAQYGRNLSQEVKNGKIDPVIGREPEIERVVQILGRRTKSNPILLGAPGVGKTAIAEGLA 228
Query: 85 QRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVH 144
QRI SGD+P+ ++ K+VI LDMG L+AGT++RG+FEERLK ++EE+++S IILFIDE+H
Sbjct: 229 QRIHSGDIPELLQDKQVIALDMGSLLAGTRFRGDFEERLKGIVEEVRKSGSIILFIDEIH 288
Query: 145 TLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEP 204
TL+GAG+ GA+DA+N+LKP+LARGELQC+GATTLDEY++HIE+D ALERRFQPV V EP
Sbjct: 289 TLVGAGSMGGAMDASNLLKPALARGELQCLGATTLDEYKQHIERDAALERRFQPVMVGEP 348
Query: 205 SVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRV 264
+ ++ I+IL+GL+ YE H+++Y +A+ +A LS +YI+DRFLPDKAIDL+DEAGSR
Sbjct: 349 TKEQAIEILRGLKATYEDFHQVKYDQKAIEAAVHLSSRYINDRFLPDKAIDLLDEAGSRT 408
Query: 265 RLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKE 324
LR++ + E+ +E I E +L+
Sbjct: 409 HLRYSLQSKSPAEVSEESPLINPE----------------------------SLI----- 435
Query: 325 MSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEA 384
PVV +I IV+AWTGIPV +++ ES+ LL +E LH+R+IGQ EA
Sbjct: 436 ------------PVVDAEEIAQIVAAWTGIPVTQLTETESESLLNLESQLHERIIGQQEA 483
Query: 385 VKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSE 444
V A+SRAIRRARV LKNPNRPIASFIF+GPTGVGK+EL KALA FGSE +MIRLDMSE
Sbjct: 484 VNAVSRAIRRARVNLKNPNRPIASFIFAGPTGVGKTELTKALAKLLFGSESSMIRLDMSE 543
Query: 445 FMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILED 504
FME HTVSKLIG+PPGY+GY EGGQLTEAVRR+PY VVLFDEIEKAHPDVFN++LQ+LED
Sbjct: 544 FMESHTVSKLIGAPPGYIGYNEGGQLTEAVRRQPYRVVLFDEIEKAHPDVFNLLLQLLED 603
Query: 505 GRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEEL 564
GRLTDS+GR VDFKNTL+IMTSN+GS VIEKGG+ +GF++ D S Y +I + VTEEL
Sbjct: 604 GRLTDSQGRRVDFKNTLIIMTSNIGSKVIEKGGKSLGFEMADDFAQSRYQQISNRVTEEL 663
Query: 565 KQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVE 624
KQYFRPEFLNRLDE+IVFRQLT+ EV +IADI++ ++ +L K I ++VT F++ V+
Sbjct: 664 KQYFRPEFLNRLDEIIVFRQLTREEVTQIADILIADIAKQLTEKGISVEVTAAFKDLVIN 723
Query: 625 EGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTV 675
EGY+PSYGARPLRRA+ R LEDS+A ML+ ++ GD ++DV +DG VTV
Sbjct: 724 EGYDPSYGARPLRRALTRRLEDSLAVAMLSGKVNSGDHALLDVTADGVVTV 774
>gi|418323135|ref|ZP_12934424.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
pettenkoferi VCU012]
gi|365230228|gb|EHM71338.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
pettenkoferi VCU012]
Length = 827
Score = 808 bits (2087), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/657 (58%), Positives = 514/657 (78%), Gaps = 11/657 (1%)
Query: 16 GSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVG 75
+ N PTL+ +LT +A++G LDPV+GR +I RV+++L RRTKNNP LIGEPGVG
Sbjct: 154 ANKSNNTPTLDSLARDLTVIAKDGTLDPVIGRNQEITRVIEVLSRRTKNNPVLIGEPGVG 213
Query: 76 KTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDE 135
KTAIAEGLAQ I + +VP+T++ K+V++LDMG +VAGTKYRGEFEERLKK+MEEI +
Sbjct: 214 KTAIAEGLAQAIVNSEVPETLKNKRVMSLDMGTVVAGTKYRGEFEERLKKVMEEIHHAGN 273
Query: 136 IILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERR 195
+ILFIDE+HTL+GAG AEGAIDA+NILKP+LARGELQCIGATTLDEYRK+IEKD ALERR
Sbjct: 274 VILFIDELHTLVGAGGAEGAIDASNILKPALARGELQCIGATTLDEYRKNIEKDAALERR 333
Query: 196 FQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAID 255
FQP++V EP+VD+T++ILKGLR+RYE HH++ +DEAL +A +LS +Y+SDRFLPDKAID
Sbjct: 334 FQPIQVDEPTVDDTVEILKGLRDRYEAHHRINISDEALEAAVKLSNRYVSDRFLPDKAID 393
Query: 256 LIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQI 315
LIDEA S+VRL+ P + +E+E+++ Q+ EK+ AV Q+FE A LRD++ L+ Q
Sbjct: 394 LIDEASSKVRLKSHTTPPDLKEIEQKIEQVKNEKDAAVHAQEFENAANLRDKQTKLEKQY 453
Query: 316 SALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLH 375
+K K + A ++E DI +++ WTGIP+ K++ ES+RLL +E+TLH
Sbjct: 454 EEANNKWKNAQNGDNTA------LSEEDIAEVIAGWTGIPLTKINETESERLLNLEDTLH 507
Query: 376 KRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEE 435
KRVIGQ EAV +IS+A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+ALA FG E+
Sbjct: 508 KRVIGQKEAVDSISKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGEED 567
Query: 436 AMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVF 495
AMIR+DMSEFME+H VS+L+G+PPGYVG+ +GGQLTE VRR+PY+V+LFDE+EKAHPDVF
Sbjct: 568 AMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKVRRKPYSVILFDEVEKAHPDVF 627
Query: 496 NMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNR 555
N++LQ+L+DG LTD+KGRTVDF+NT++IMTSNVG+ ++ R GF + D Y
Sbjct: 628 NILLQVLDDGHLTDTKGRTVDFRNTVIIMTSNVGAQELQD-QRFAGFGGASENND--YET 684
Query: 556 IKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVT 615
I+ + +ELK FRPEFLNR+D++IVF +L++ E+KEI +M+ ++ DRL +DI ++VT
Sbjct: 685 IRKTMMKELKNAFRPEFLNRVDDIIVFHKLSQDELKEIVTMMVNKLTDRLAEQDIVIKVT 744
Query: 616 ERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGN 672
+ + ++ EEGY+P YGARPL RAI + +ED+++E +LA EG VI +D DGN
Sbjct: 745 DAAKAKIAEEGYDPEYGARPLIRAIQKTVEDNLSELILAGNQLEGKDVI--IDHDGN 799
>gi|425738218|ref|ZP_18856484.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
massiliensis S46]
gi|425480228|gb|EKU47396.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
massiliensis S46]
Length = 815
Score = 808 bits (2087), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/654 (59%), Positives = 514/654 (78%), Gaps = 9/654 (1%)
Query: 17 SSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGK 76
S GN PTL+ +LT +A++G LDPVVGR +I RV+++L RRTKNNP LIGEPGVGK
Sbjct: 155 SKGNNTPTLDSLARDLTVIAKDGTLDPVVGRNKEITRVIEVLSRRTKNNPVLIGEPGVGK 214
Query: 77 TAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEI 136
TAIAEGLAQ I S +VP+T++GK+V++LDMG +VAGTKYRGEFEERLKK+MEEI Q+ +
Sbjct: 215 TAIAEGLAQAIVSNEVPETLKGKRVMSLDMGTVVAGTKYRGEFEERLKKVMEEIHQAGNV 274
Query: 137 ILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRF 196
ILFIDE+HTLIGAG AEGAIDA+NILKP+LARGELQCIGATTLDEYRKHIEKD ALERRF
Sbjct: 275 ILFIDELHTLIGAGGAEGAIDASNILKPALARGELQCIGATTLDEYRKHIEKDAALERRF 334
Query: 197 QPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDL 256
QPV+V EP+V +TI+IL+GLR+RYE HH++ +DEAL +AA+LS +YISDRFLPDKAIDL
Sbjct: 335 QPVQVDEPTVPDTIRILEGLRDRYEAHHRINISDEALAAAAKLSDRYISDRFLPDKAIDL 394
Query: 257 IDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQIS 316
+DEA S+VRL+ P +ELE+++ ++ EK+ AV Q+FE A LRD++ L+ Q
Sbjct: 395 VDEASSKVRLKSHTTPTNLKELEQQIEKVKSEKDAAVHSQEFENAANLRDQQTKLEKQYE 454
Query: 317 ALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHK 376
++ ++ + G + E DI +V+ WTGIP+ K++ ES+RLL +E+TLH+
Sbjct: 455 TAKNEWRK------DQGGQNTTLVEEDIAEVVAGWTGIPLTKINETESERLLNLEDTLHE 508
Query: 377 RVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEA 436
RVIGQ +AV +IS+A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+ALA FG E+A
Sbjct: 509 RVIGQKDAVTSISKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGEEDA 568
Query: 437 MIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFN 496
MIR+DMSEFME+H VS+L+G+PPGYVG+ +GGQLTE VRR+PY+VVLFDEIEKAHP+VFN
Sbjct: 569 MIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKVRRKPYSVVLFDEIEKAHPEVFN 628
Query: 497 MMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRI 556
++LQ+L+DG LTD+KGR VDF+NT++IMTSNVG+ ++ R GF ++ + Y I
Sbjct: 629 ILLQVLDDGHLTDTKGRKVDFRNTVIIMTSNVGAQELQD-QRFAGF--GGSDQTNDYETI 685
Query: 557 KSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTE 616
+ + +ELK FRPEFLNR+D++IVF +L K E+KEI +M+ ++ RL ++I +QVT+
Sbjct: 686 RKTMLKELKNAFRPEFLNRVDDIIVFHRLEKEELKEIVTMMVNKLTKRLDEQNIHIQVTD 745
Query: 617 RFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSD 670
+ ++R+ EEGY+P YGARPL RAI + +ED+++E +L EG +V VD D D
Sbjct: 746 KAKDRIAEEGYDPEYGARPLIRAIQKAIEDNLSELILDGRNIEGKAVTVDYDGD 799
>gi|117927429|ref|YP_871980.1| ATPase [Acidothermus cellulolyticus 11B]
gi|117647892|gb|ABK51994.1| ATPase AAA-2 domain protein [Acidothermus cellulolyticus 11B]
Length = 839
Score = 808 bits (2086), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/687 (58%), Positives = 534/687 (77%), Gaps = 15/687 (2%)
Query: 6 TEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNN 65
EA G G+ + L+++G NLT+ A EGKLDPV+GR+ +IERV+Q+L RRTKNN
Sbjct: 149 AEATAGGPAEGTQSTSL-VLDQFGRNLTQAAREGKLDPVIGREKEIERVMQVLSRRTKNN 207
Query: 66 PCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKK 125
P L+GEPGVGKTAI EGLAQ I G+VP+T++ K++ TLD+G LVAG++YRG+FEERLKK
Sbjct: 208 PVLVGEPGVGKTAIVEGLAQAIVKGEVPETLKDKQLYTLDLGALVAGSRYRGDFEERLKK 267
Query: 126 LMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKH 185
+++EI+ +I+LFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEYRKH
Sbjct: 268 VLKEIRTRGDIVLFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIGATTLDEYRKH 327
Query: 186 IEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYIS 245
+EKD ALERRFQP++V EPS+ TI+ILKGLR+RYE HHK+ TD ALV+AAQL+ +YIS
Sbjct: 328 LEKDAALERRFQPIQVNEPSLAHTIEILKGLRDRYESHHKVTITDGALVAAAQLADRYIS 387
Query: 246 DRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELR 305
DRFLPDKAIDLIDEAGSR+R+R P + RE ++++ + +EK A+ QDFEKA LR
Sbjct: 388 DRFLPDKAIDLIDEAGSRLRIRRMTAPPDLREFDEKIAAVRREKESAIDAQDFEKAAALR 447
Query: 306 DREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKVSTD 362
D+E L A K + E +AGD+ VV EVD I ++SA TGIPV K++ +
Sbjct: 448 DKEKQLLA--------AKAQREREWKAGDMD-VVAEVDEDLIAEVLSAATGIPVFKLTEE 498
Query: 363 ESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSEL 422
E+ RLL+MEE LHKRVIGQDEA+KA+S+AIRR R GLK+P RP SFIF+GP+GVGK+EL
Sbjct: 499 ETARLLRMEEELHKRVIGQDEAIKALSQAIRRTRAGLKDPKRPGGSFIFAGPSGVGKTEL 558
Query: 423 AKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVV 482
+KALA + FG E+++I+LDMSEFME+HTVS+L GSPPGYVGY EGGQLTE VRR+P++VV
Sbjct: 559 SKALAEFLFGDEDSLIQLDMSEFMEKHTVSRLFGSPPGYVGYDEGGQLTEKVRRKPFSVV 618
Query: 483 LFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGF 542
LFDE+EKAHPD+FN +LQILEDGRLTD++GR VDFKNT++IMT+N+G+ I K G +GF
Sbjct: 619 LFDEVEKAHPDIFNSLLQILEDGRLTDAQGRVVDFKNTVIIMTTNLGTRDIAK-GFNMGF 677
Query: 543 DLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVF 602
+ D + SY R+++ V +ELKQ+FRPEFLNR+D++IVF QLT+ E+ +I D+M+ +V
Sbjct: 678 SKENDTQ-GSYERMRAKVQDELKQHFRPEFLNRVDDIIVFHQLTEDEIVKIVDLMIAKVD 736
Query: 603 DRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDS 662
+RL+ +D+ +++T + + ++GY+P GARPLRR I RL+ED ++EK+L E++ G
Sbjct: 737 ERLRDRDMSIELTPAAKALLAQKGYDPVLGARPLRRTIQRLVEDPVSEKILFGELRPGHI 796
Query: 663 VIVDVDSDGNVTVLNGSSGAPESLADP 689
++VD ++ G G P+ A P
Sbjct: 797 IVVDAENVGTPDARLTFRGEPKPAAVP 823
>gi|410582488|ref|ZP_11319594.1| ATPase with chaperone activity, ATP-binding subunit
[Thermaerobacter subterraneus DSM 13965]
gi|410505308|gb|EKP94817.1| ATPase with chaperone activity, ATP-binding subunit
[Thermaerobacter subterraneus DSM 13965]
Length = 834
Score = 808 bits (2086), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/656 (62%), Positives = 528/656 (80%), Gaps = 8/656 (1%)
Query: 23 PTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEG 82
P L+ +G +LT++AEEGKLDPV+GR +IERV+QIL RRTKNNP LIGEPGVGKTAI EG
Sbjct: 163 PVLDNFGRDLTQMAEEGKLDPVIGRDKEIERVIQILSRRTKNNPVLIGEPGVGKTAIVEG 222
Query: 83 LAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDE 142
LAQRIA G VP+ ++ ++V+ LD+G LVAG+KYRGEFEERLKK+M+EI+++ IILFIDE
Sbjct: 223 LAQRIAEGKVPEILKDRRVVALDLGALVAGSKYRGEFEERLKKVMDEIRRAGNIILFIDE 282
Query: 143 VHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVP 202
+HT+IGAGAAEGAIDAA+ILKP+LARGELQ IGATTLDEYRKH+EKD ALERRFQP+ V
Sbjct: 283 MHTIIGAGAAEGAIDAASILKPALARGELQTIGATTLDEYRKHVEKDAALERRFQPIMVE 342
Query: 203 EPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGS 262
EPSV++ IQIL+GLR+RYE HH++ TD+A+V+A +L+ +YISDRFLPDKAIDLIDEA S
Sbjct: 343 EPSVEDAIQILRGLRDRYEAHHRVEITDDAIVAAVKLADRYISDRFLPDKAIDLIDEAAS 402
Query: 263 RVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKG 322
R RL+ P E +E+E+ L +I KEK AV+ Q+FEKA LRD+E L ++
Sbjct: 403 RARLQAFVAPPELKEIEQRLEEIRKEKEAAVQSQEFEKAANLRDQEQKLVEELE------ 456
Query: 323 KEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQD 382
++ S+ + + + VVT DI IVS WTGIPV ++ ES+RLLK+EE LH+R++GQD
Sbjct: 457 RKKSEWQQQQLNEKIVVTADDIAQIVSNWTGIPVRRLEQAESERLLKLEEILHERIVGQD 516
Query: 383 EAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDM 442
+AV+A++RAIRRAR GLK+P RPI SFIF GPTGVGK+ELAKALA FG E+AMI LDM
Sbjct: 517 DAVRAVARAIRRARAGLKDPRRPIGSFIFLGPTGVGKTELAKALAEALFGDEDAMIVLDM 576
Query: 443 SEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQIL 502
SE+MERHTVS+L+GSPPGYVGY EGGQLTE VRRRPY+VV+FDEIEKAHP+VFN++LQIL
Sbjct: 577 SEYMERHTVSRLVGSPPGYVGYEEGGQLTEQVRRRPYSVVVFDEIEKAHPEVFNVLLQIL 636
Query: 503 EDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTE 562
E+GRLT++KGRTVDF+NT++IMTSNVG+ +I + G R+GF +++ Y +K + +
Sbjct: 637 EEGRLTEAKGRTVDFRNTVIIMTSNVGADLIRRQG-RVGFQA-AEQEAPDYEDMKRKIMD 694
Query: 563 ELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERV 622
E+K+ FRPEFLNR+DE+IVF LT+ + +I D+MLK V +RLK + L+VTE + ++
Sbjct: 695 EVKRTFRPEFLNRIDELIVFHALTEEHLMKIVDLMLKRVAERLKEHGLALEVTEAAKRKL 754
Query: 623 VEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNG 678
V+EG + YGARPLRR I RL+ED ++E+MLA KEGD+V+VDVD++G + G
Sbjct: 755 VKEGSDVVYGARPLRRTITRLVEDPLSEEMLAGRFKEGDTVLVDVDAEGKIVFRQG 810
>gi|271970316|ref|YP_003344512.1| class III stress response-related ATPase [Streptosporangium roseum
DSM 43021]
gi|270513491|gb|ACZ91769.1| class III stress response-related ATPase [Streptosporangium roseum
DSM 43021]
Length = 835
Score = 808 bits (2086), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/671 (59%), Positives = 531/671 (79%), Gaps = 16/671 (2%)
Query: 24 TLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGL 83
L+++G NLT+ A EGKLDPV+GR+ +IERV+Q+L RRTKNNP L+GEPGVGKTA+ EGL
Sbjct: 166 VLDQFGRNLTQAAREGKLDPVIGREKEIERVMQVLSRRTKNNPVLVGEPGVGKTAVVEGL 225
Query: 84 AQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEV 143
+Q+I G+VP+T++ K++ TLD+G LVAG++YRG+FEERLKK+++EI+ +IILFIDE+
Sbjct: 226 SQKIVKGEVPETLKDKQLYTLDLGALVAGSRYRGDFEERLKKVLKEIRTRGDIILFIDEL 285
Query: 144 HTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPE 203
HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEYRKH+EKD ALERRFQP++V E
Sbjct: 286 HTLVGAGAAEGAIDAASILKPMLARGELQTIGATTLDEYRKHLEKDAALERRFQPIQVAE 345
Query: 204 PSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSR 263
PS+ TI+ILKGLR+RYE HH++ TD ALV+AAQL+ +YISDRFLPDKAIDLIDEAGSR
Sbjct: 346 PSLSHTIEILKGLRDRYEAHHRVSITDGALVAAAQLADRYISDRFLPDKAIDLIDEAGSR 405
Query: 264 VRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGK 323
+R+R P + RE ++++ + ++K A+ QDFEKA LRD+E L+ + +
Sbjct: 406 MRIRRMTAPPDLREYDEKIANVRRDKESAIDAQDFEKAAALRDQEKQLQLK--------R 457
Query: 324 EMSKAETEAGDVGPV--VTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQ 381
E + E +AGD+ V VTE I +++ TGIPV K++ +ES RLL+ME+ LHKR+IGQ
Sbjct: 458 ERREKEWKAGDMDVVAEVTEELIAEVLATATGIPVFKLTEEESQRLLRMEDELHKRIIGQ 517
Query: 382 DEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLD 441
D+A+K +SR+IRR R GLK+P RP SFIF+GP+GVGK+EL+KALA + FG E+A+I LD
Sbjct: 518 DDAIKGLSRSIRRTRAGLKDPRRPGGSFIFAGPSGVGKTELSKALAEFLFGDEDALIMLD 577
Query: 442 MSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQI 501
MSEFME+HTVS+L GSPPGYVGY EGGQLTE VRR+P++VVLFDEIEKAHPD+FN +LQI
Sbjct: 578 MSEFMEKHTVSRLFGSPPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHPDIFNSLLQI 637
Query: 502 LEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVT 561
LEDGRLTD++GR VDFKNT++IMT+N+G+ I K G+ +GF D +S+Y+R+KS V
Sbjct: 638 LEDGRLTDAQGRVVDFKNTVIIMTTNLGTRDISK-GQGVGFAKSND-TESNYDRMKSKVQ 695
Query: 562 EELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRER 621
EELKQ+FRPEFLNR+D+++VF QLT E+ +I D+ML +V +RLK +D+ L+VT+ ++
Sbjct: 696 EELKQHFRPEFLNRVDDIVVFHQLTPKEIIKIVDLMLAQVGERLKDRDMGLEVTQDAKQL 755
Query: 622 VVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDG-NVTVLNGSS 680
+ + GY+P GARPLRR I R LEDS++EK+L E++ G V + ++ +G N +
Sbjct: 756 LADRGYDPVMGARPLRRTIQRELEDSLSEKILYGELRPGQIVKISIEGEGDNAKFVFVGE 815
Query: 681 GAPESLADPLP 691
AP AD +P
Sbjct: 816 AAP---ADQVP 823
>gi|425462781|ref|ZP_18842248.1| ATP-dependent Clp protease ATP-binding subunit clpA homolog
[Microcystis aeruginosa PCC 9808]
gi|389824116|emb|CCI27215.1| ATP-dependent Clp protease ATP-binding subunit clpA homolog
[Microcystis aeruginosa PCC 9808]
Length = 795
Score = 808 bits (2086), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 394/651 (60%), Positives = 501/651 (76%), Gaps = 45/651 (6%)
Query: 25 LEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLA 84
L +YG NL++ + GK+DPV+GR+P+IERVVQILGRRTK+NP L+G PGVGKTAIAEGLA
Sbjct: 169 LAQYGRNLSQEVKNGKIDPVIGREPEIERVVQILGRRTKSNPILLGAPGVGKTAIAEGLA 228
Query: 85 QRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVH 144
QRI SGD+P+ ++ K+VI LDMG L+AGT++RG+FEERLK ++EE+++S IILFIDE+H
Sbjct: 229 QRIHSGDIPELLQDKQVIALDMGSLLAGTRFRGDFEERLKGVVEEVRKSGSIILFIDEIH 288
Query: 145 TLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEP 204
TL+GAG+ GA+DA+N+LKP+LARGELQC+GATTLDEY++HIE+D ALERRFQPV V EP
Sbjct: 289 TLVGAGSMGGAMDASNLLKPALARGELQCLGATTLDEYKQHIERDAALERRFQPVMVGEP 348
Query: 205 SVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRV 264
+ ++ I+IL+GL+ YE H+++Y +A+ +A LS +YI+DRFLPDKAIDL+DEAGSR
Sbjct: 349 TKEQAIEILRGLKATYEDFHQVKYDQKAIEAAVHLSSRYINDRFLPDKAIDLLDEAGSRT 408
Query: 265 RLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKE 324
LR++ + E+ +E I E +L+
Sbjct: 409 HLRYSLQSKSPAEVSEESPLINPE----------------------------SLI----- 435
Query: 325 MSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEA 384
PVV +I IV+AWTGIPV +++ ES+ LL +E LH+R+IGQ EA
Sbjct: 436 ------------PVVDAEEIAQIVAAWTGIPVTQLTETESESLLNLEYQLHERIIGQQEA 483
Query: 385 VKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSE 444
V A+SRAIRRARV LKNPNRPIASFIF+GPTGVGK+EL KALA FGSE +MIRLDMSE
Sbjct: 484 VNAVSRAIRRARVNLKNPNRPIASFIFAGPTGVGKTELTKALAKLLFGSESSMIRLDMSE 543
Query: 445 FMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILED 504
FME HTVSKLIG+PPGY+GY EGGQLTEAVRR+PY VVLFDEIEKAHPDVFN++LQ+LED
Sbjct: 544 FMESHTVSKLIGAPPGYIGYNEGGQLTEAVRRQPYRVVLFDEIEKAHPDVFNLLLQLLED 603
Query: 505 GRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEEL 564
GRLTDS+GR VDFKNTL+IMTSN+GS VIEKGG+ +GF++ D S Y +I + VTEEL
Sbjct: 604 GRLTDSQGRRVDFKNTLIIMTSNIGSKVIEKGGKSLGFEMADDFAQSRYQQISNRVTEEL 663
Query: 565 KQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVE 624
KQYFRPEFLNRLDE+IVFRQLT+ EV +IADI++ ++ +L K I +QVT F++ V+
Sbjct: 664 KQYFRPEFLNRLDEIIVFRQLTREEVTQIADILIADLAKQLTEKGISVQVTAAFKDLVIN 723
Query: 625 EGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTV 675
EGY+PSYGARPLRRA+ R LEDS+AE ML+ ++ GD ++DV ++ VTV
Sbjct: 724 EGYDPSYGARPLRRALTRRLEDSLAEAMLSGKVNSGDHALLDVTAEAVVTV 774
>gi|403047553|ref|ZP_10903021.1| stress response-related Clp ATPase [Staphylococcus sp. OJ82]
gi|402763087|gb|EJX17181.1| stress response-related Clp ATPase [Staphylococcus sp. OJ82]
Length = 820
Score = 808 bits (2086), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 388/656 (59%), Positives = 513/656 (78%), Gaps = 11/656 (1%)
Query: 16 GSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVG 75
+ N PTL+ +LT +A++G LDPV+GR +I RV+++L RRTKNNP LIGEPGVG
Sbjct: 154 ANKSNNTPTLDSLARDLTVIAKDGTLDPVIGRDKEITRVIEVLSRRTKNNPVLIGEPGVG 213
Query: 76 KTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDE 135
KTAIAEGLAQ I +VP+T++GK+V++LDMG +VAGTKYRGEFEERLKK+MEEI Q+ +
Sbjct: 214 KTAIAEGLAQSIIKNEVPETLKGKRVMSLDMGTVVAGTKYRGEFEERLKKVMEEIHQAGD 273
Query: 136 IILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERR 195
+ILFIDE+HTL+GAG AEGAIDA+NILKP+LARGELQCIGATTLDEYRK+IEKD ALERR
Sbjct: 274 VILFIDELHTLVGAGGAEGAIDASNILKPALARGELQCIGATTLDEYRKNIEKDAALERR 333
Query: 196 FQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAID 255
FQPV+V EP+V++TI+ILKGLR+RYE HH++ +DEA++SAA LS++Y+SDRFLPDKAID
Sbjct: 334 FQPVQVDEPTVEDTIEILKGLRDRYEAHHRINISDEAVISAATLSHRYVSDRFLPDKAID 393
Query: 256 LIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQI 315
LIDEA S+VRLR P +ELE+E+ Q+ EK+ AV Q+FE A LRD++ L+ Q
Sbjct: 394 LIDEASSKVRLRSHTTPPNLKELEQEIEQVKNEKDAAVHSQEFENAANLRDKQTKLEKQY 453
Query: 316 SALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLH 375
+ K + + ++E DI +++ WTGIP+ K++ ESDRLL +E+TLH
Sbjct: 454 EEANNNWKNAQNGDNTS------LSEEDIGEVIAGWTGIPLTKINETESDRLLNLEDTLH 507
Query: 376 KRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEE 435
RVIGQ AV +IS+A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+ALA FG ++
Sbjct: 508 NRVIGQKAAVTSISKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGEDD 567
Query: 436 AMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVF 495
AMIR+DMSEFME+H VS+L+G+PPGYVG+ +GGQLTE VRR+PY+V+LFDEIEKAHPDVF
Sbjct: 568 AMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKVRRKPYSVILFDEIEKAHPDVF 627
Query: 496 NMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNR 555
N++LQ+L+DG LTD+KGR VDF+NT++IMTSNVG+ ++ R GF + +D Y
Sbjct: 628 NILLQVLDDGHLTDTKGRRVDFRNTVIIMTSNVGAQELQD-QRFAGFGGASEGQD--YET 684
Query: 556 IKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVT 615
I++ + +ELK FRPEFLNR+D+ IVF +L+K E+KEI +M+ ++ DRL +DI ++VT
Sbjct: 685 IRNTMMKELKNAFRPEFLNRVDDTIVFHKLSKEELKEIVTMMINKLTDRLSEQDINIEVT 744
Query: 616 ERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDG 671
+ +E++ EEGY+P YGARPL RAI + +ED+++E +L EG V++D DG
Sbjct: 745 DAAKEKIAEEGYDPEYGARPLIRAIQKTVEDNLSELILDGNQIEGKK--VEIDHDG 798
>gi|354585457|ref|ZP_09004344.1| ATPase AAA-2 domain protein [Paenibacillus lactis 154]
gi|353188726|gb|EHB54246.1| ATPase AAA-2 domain protein [Paenibacillus lactis 154]
Length = 818
Score = 808 bits (2086), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/681 (58%), Positives = 523/681 (76%), Gaps = 10/681 (1%)
Query: 5 STEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKN 64
S+EAV + G PTL+ +LT +A+EG LDPV+GR +IERV+Q+L RRTKN
Sbjct: 144 SSEAVSSH-HGTPQNVSTPTLDSLARDLTAIAKEGNLDPVIGRSKEIERVIQVLSRRTKN 202
Query: 65 NPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLK 124
NP LIGEPGVGKTAIAEGLAQRI + ++P+T+ K+V+TLDMG +VAGTKYRGEFE+RLK
Sbjct: 203 NPVLIGEPGVGKTAIAEGLAQRIINNEIPETLRDKRVMTLDMGSVVAGTKYRGEFEDRLK 262
Query: 125 KLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRK 184
K+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTLDEYRK
Sbjct: 263 KIMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEYRK 322
Query: 185 HIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYI 244
+IEKD ALERRFQP+ V +PS +E IQIL GLR+RYE HH+++ TDEA+ A +LS +YI
Sbjct: 323 YIEKDAALERRFQPITVDQPSPEEAIQILYGLRDRYEAHHRVKITDEAIEQAVKLSDRYI 382
Query: 245 SDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGEL 304
+DRFLPDKAIDLIDEAGS+VRL +P ++ E L I KEK+ AV+ Q+FEKA L
Sbjct: 383 TDRFLPDKAIDLIDEAGSKVRLNTYTIPPNLKDQEAHLEDIRKEKDAAVQSQEFEKAAAL 442
Query: 305 RDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDES 364
RD E L+ ++ ++ KE + G VT DI +V+ WTGIPV K+ +E+
Sbjct: 443 RDTEQKLREELEITKNQWKE------KQGRTDSEVTPEDIADVVANWTGIPVNKLKEEET 496
Query: 365 DRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAK 424
+RLL +EE LH RVIGQ+EAVKA+SRA+RRAR GLK+P RP+ SFIF GPTGVGK+ELA+
Sbjct: 497 ERLLNLEEILHSRVIGQEEAVKAVSRAVRRARAGLKDPKRPMGSFIFLGPTGVGKTELAR 556
Query: 425 ALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLF 484
ALA FG E A++R+DMSE+ME+H+ ++L+G+PPGYVGY EGGQLTE VRR+PY+VVL
Sbjct: 557 ALAEAMFGDENAVVRIDMSEYMEKHSTARLVGAPPGYVGYEEGGQLTEKVRRKPYSVVLL 616
Query: 485 DEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDL 544
DEIEKAHP+VFN++LQ+LEDGRLTDSKGR VDF+NTL+I+TSNVG+ I++ +GF
Sbjct: 617 DEIEKAHPEVFNILLQVLEDGRLTDSKGRVVDFRNTLIILTSNVGAEAIKRNS-TLGFTA 675
Query: 545 DYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDR 604
D YN +K+ V +ELK+ FRPEFLNR+DE+IVF L + + EI +M E+ R
Sbjct: 676 VTD-AGRDYNNMKTKVMDELKKSFRPEFLNRIDEIIVFHSLEEKHIAEIVTLMSDELRKR 734
Query: 605 LKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVI 664
L+ D+E ++T++ + + +EGY+P++GARPLRRAI + +ED ++E++L +K+GD++I
Sbjct: 735 LREFDVEFELTDQAKAFIAKEGYDPAFGARPLRRAIQKHIEDRLSEELLKGNVKKGDALI 794
Query: 665 VDVDSDGNVTVLNGSSGAPES 685
+D + +G ++V S A S
Sbjct: 795 ID-EENGELSVRKKDSVAAAS 814
>gi|70727483|ref|YP_254399.1| endopeptidase Clp ATP-binding subunit C [Staphylococcus
haemolyticus JCSC1435]
gi|122063324|sp|Q4L3I4.1|CLPC_STAHJ RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpC
gi|68448209|dbj|BAE05793.1| endopeptidas Clp ATP-binding chain C [Staphylococcus haemolyticus
JCSC1435]
Length = 824
Score = 807 bits (2085), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 388/655 (59%), Positives = 512/655 (78%), Gaps = 9/655 (1%)
Query: 16 GSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVG 75
+ N PTL+ +LT +A++G LDPVVGR +I RV+++L RRTKNNP LIGEPGVG
Sbjct: 154 ANKSNNTPTLDGLARDLTVIAKDGTLDPVVGRDKEITRVIEVLSRRTKNNPVLIGEPGVG 213
Query: 76 KTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDE 135
KTAIAEGLAQ I + +VP+T++GK+V++LDMG +VAGTKYRGEFEERLKK+MEEI Q+
Sbjct: 214 KTAIAEGLAQAIVNNEVPETLKGKRVMSLDMGTVVAGTKYRGEFEERLKKVMEEIHQAGN 273
Query: 136 IILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERR 195
+ILFIDE+HTL+GAG AEGAIDA+NILKP+LARGELQCIGATTLDEYRK+IEKD ALERR
Sbjct: 274 VILFIDELHTLVGAGGAEGAIDASNILKPALARGELQCIGATTLDEYRKNIEKDAALERR 333
Query: 196 FQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAID 255
FQP++V EP+V++TI ILKGLR+RYE HH++ +DEAL +AA+LS Y+SDRFLPDKAID
Sbjct: 334 FQPIQVDEPTVEDTIAILKGLRDRYEAHHRINISDEALEAAAKLSDCYVSDRFLPDKAID 393
Query: 256 LIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQI 315
LIDEA S+VRL+ P +E+E+E+ ++ EK+ AV Q+FE A LRD++ L+ Q
Sbjct: 394 LIDEASSKVRLKSHTTPNNLKEIEQEIEKVKNEKDAAVHAQEFENAANLRDKQTKLEKQY 453
Query: 316 SALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLH 375
++ K T GD +++ DI +++ WTGIP+ K++ ESDRLL +E+TLH
Sbjct: 454 EDAKNEWK------TTQGDQSTSLSKEDIGEVIAGWTGIPLTKINETESDRLLNLEQTLH 507
Query: 376 KRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEE 435
RVIGQ++AV +IS+A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+ALA FG E+
Sbjct: 508 DRVIGQNDAVTSISKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGEED 567
Query: 436 AMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVF 495
AMIR+DMSEFME+H VS+L+G+PPGYVG+ EGGQLTE VRR+PY+V+LFDEIEKAHPDVF
Sbjct: 568 AMIRVDMSEFMEKHAVSRLVGAPPGYVGHDEGGQLTEKVRRKPYSVILFDEIEKAHPDVF 627
Query: 496 NMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNR 555
N++LQ+L+DG LTD+KGR VDF+NT++IMTSNVG+ ++ R GF + D Y
Sbjct: 628 NILLQVLDDGHLTDTKGRQVDFRNTVIIMTSNVGAQELQD-QRFAGFGGGSEGHD--YET 684
Query: 556 IKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVT 615
I+ + +ELK FRPEFLNR+D++IVF +L+K E+KEI +M+ ++ RL +DI + VT
Sbjct: 685 IRKTMMKELKNSFRPEFLNRVDDIIVFHKLSKDELKEIVTMMVNKLTQRLSEQDINIVVT 744
Query: 616 ERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSD 670
++ +E++ EEGY+P YGARPL RAI + +ED+++E +L EG V++D D D
Sbjct: 745 DKAKEKIAEEGYDPEYGARPLIRAIQKTVEDNLSELILDGNQIEGKEVVIDHDGD 799
>gi|404330422|ref|ZP_10970870.1| class III stress response-related ATPase [Sporolactobacillus vineae
DSM 21990 = SL153]
Length = 815
Score = 807 bits (2085), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/675 (58%), Positives = 519/675 (76%), Gaps = 10/675 (1%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
++G G G S+ PTL+ +LT +A EG LDPV+GR +IERV+++L R
Sbjct: 141 LLGSHEATAGGAQGRASAHASTPTLDSLARDLTAMAGEGGLDPVIGRSKEIERVIEVLSR 200
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNP LIGEPGVGKTA+AEGLAQ I + +VP+ + K+V+TLDMG +VAGTKYRGEFE
Sbjct: 201 RTKNNPVLIGEPGVGKTAVAEGLAQEIVNNEVPEILRDKRVMTLDMGTVVAGTKYRGEFE 260
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
+RLKK+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSL+RGELQCIGATTLD
Sbjct: 261 DRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLSRGELQCIGATTLD 320
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRK+IEKD ALERRFQP+KV EP+ +E++ ILKGLR+RYE HH+++ TD A+ +A LS
Sbjct: 321 EYRKYIEKDAALERRFQPIKVKEPTKEESVLILKGLRDRYEAHHRVKITDAAVEAAVNLS 380
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
+YISDRFLPDKAIDL+DEA S+VRLR P + +ELE++L + KEK+ AV+ Q+FEK
Sbjct: 381 DRYISDRFLPDKAIDLMDEASSKVRLRSYTAPPDLKELEQKLETVKKEKDAAVQSQEFEK 440
Query: 301 AGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVS 360
A LRD E LK Q+ + KE E V D+ +V+ WTGIPV ++
Sbjct: 441 AASLRDSEQKLKEQVDVCEKEWKEKQGKENTQ------VLADDVAQVVANWTGIPVVRLE 494
Query: 361 TDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 420
ES+RLL ME+ LHKRVIGQDEA++AIS A+RRAR GLK+P RPI SFIF GPTGVGK+
Sbjct: 495 QKESERLLHMEDILHKRVIGQDEAIRAISHAVRRARAGLKDPKRPIGSFIFLGPTGVGKT 554
Query: 421 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 480
ELA+A+A FG EEA+IR+DMSE+ME+HT S+L+GSPPGYVG+ EGGQLTE VR++PY+
Sbjct: 555 ELARAVAETLFGDEEAIIRIDMSEYMEKHTTSRLVGSPPGYVGHEEGGQLTEKVRQKPYS 614
Query: 481 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI 540
V+LFDEIEKAHPDVFN++LQ+L+DGRLTDSKGRTVDF+NT +IMTSNVG+S +++ + +
Sbjct: 615 VILFDEIEKAHPDVFNILLQVLDDGRLTDSKGRTVDFRNTAIIMTSNVGASELKR-NKYV 673
Query: 541 GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 600
GF + + + Y +K V ELK+ FRPEFLNR+DE+IVF +LTK ++ +I ++
Sbjct: 674 GFTVGGE--NHEYKEMKDKVMGELKRAFRPEFLNRIDEIIVFHELTKPQLMQIVTLLAGH 731
Query: 601 VFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEG 660
+ RL ++ I + +T++ + ++VEEGY+P YGARPLRRA+ R +ED ++E++L I++G
Sbjct: 732 LKHRLSSQGIVIDITDKAKAQIVEEGYDPEYGARPLRRALQRRVEDKLSEELLKGNIEKG 791
Query: 661 DSVIVDVDSDGNVTV 675
VI+D +DG+ V
Sbjct: 792 TQVIIDY-ADGDYVV 805
>gi|425449338|ref|ZP_18829179.1| ATP-dependent Clp protease ATP-binding subunit clpA homolog
[Microcystis aeruginosa PCC 7941]
gi|389764052|emb|CCI09557.1| ATP-dependent Clp protease ATP-binding subunit clpA homolog
[Microcystis aeruginosa PCC 7941]
Length = 795
Score = 807 bits (2085), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 394/651 (60%), Positives = 501/651 (76%), Gaps = 45/651 (6%)
Query: 25 LEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLA 84
L +YG NL++ + GK+DPV+GR+P+IERVVQILGRRTK+NP L+G PGVGKTAIAEGLA
Sbjct: 169 LAQYGRNLSQEVKNGKIDPVIGREPEIERVVQILGRRTKSNPILLGAPGVGKTAIAEGLA 228
Query: 85 QRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVH 144
QRI SGD+P+ ++ K+VI LDMG L+AGT++RG+FEERLK ++EE+++S IILFIDE+H
Sbjct: 229 QRIHSGDIPELLQDKQVIALDMGSLLAGTRFRGDFEERLKGIVEEVRKSGSIILFIDEIH 288
Query: 145 TLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEP 204
TL+GAG+ GA+DA+N+LKP+LARGELQC+GATTLDEY++HIE+D ALERRFQPV V EP
Sbjct: 289 TLVGAGSMGGAMDASNLLKPALARGELQCLGATTLDEYKQHIERDAALERRFQPVMVGEP 348
Query: 205 SVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRV 264
+ ++ I+IL+GL+ YE H+++Y +A+ +A LS +YI+DRFLPDKAIDL+DEAGSR
Sbjct: 349 TKEQAIEILRGLKATYEDFHQVKYDQKAIEAAVHLSSRYINDRFLPDKAIDLLDEAGSRT 408
Query: 265 RLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKE 324
LR++ + E+ +E I E +L+
Sbjct: 409 HLRYSLQSKSPAEVSEESPLINPE----------------------------SLI----- 435
Query: 325 MSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEA 384
PVV +I IV+AWTGIPV +++ ES+ LL +E LH+R+IGQ EA
Sbjct: 436 ------------PVVDAEEIAQIVAAWTGIPVTQLTETESESLLNLECQLHERIIGQQEA 483
Query: 385 VKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSE 444
V A+SRAIRRARV LKNPNRPIASFIF+GPTGVGK+EL KALA FGSE +MIRLDMSE
Sbjct: 484 VNAVSRAIRRARVNLKNPNRPIASFIFAGPTGVGKTELTKALAKLLFGSESSMIRLDMSE 543
Query: 445 FMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILED 504
FME HTVSKLIG+PPGY+GY EGGQLTEAVRR+PY VVLFDEIEKAHPDVFN++LQ+LED
Sbjct: 544 FMESHTVSKLIGAPPGYIGYNEGGQLTEAVRRQPYRVVLFDEIEKAHPDVFNLLLQLLED 603
Query: 505 GRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEEL 564
GRLTDS+GR VDFKNTL+IMTSN+GS VIEKGG +GF++ D S Y +I + VT+EL
Sbjct: 604 GRLTDSQGRRVDFKNTLIIMTSNIGSKVIEKGGNSLGFEMADDFAQSRYQQISNRVTDEL 663
Query: 565 KQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVE 624
KQYFRPEFLNRLDE+IVFRQLT+ EV +IADI++ ++ +L K I ++VT F++ V+
Sbjct: 664 KQYFRPEFLNRLDEIIVFRQLTREEVTQIADILIADLAKQLTEKGISVEVTAAFKDLVIN 723
Query: 625 EGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTV 675
EGY+PSYGARPLRRA+ R LEDS+AE ML+ ++ GD ++DV +DG VTV
Sbjct: 724 EGYDPSYGARPLRRALTRRLEDSLAEAMLSGKVNSGDHALLDVTADGVVTV 774
>gi|73663540|ref|YP_302321.1| stress response-related Clp ATPase [Staphylococcus saprophyticus
subsp. saprophyticus ATCC 15305]
gi|122063325|sp|Q49V34.1|CLPC_STAS1 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpC
gi|72496055|dbj|BAE19376.1| putative stress response-related Clp ATPase [Staphylococcus
saprophyticus subsp. saprophyticus ATCC 15305]
Length = 820
Score = 807 bits (2085), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 388/653 (59%), Positives = 513/653 (78%), Gaps = 9/653 (1%)
Query: 16 GSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVG 75
+ N PTL+ +LT +A++G LDPV+GR +I RV+++L RRTKNNP LIGEPGVG
Sbjct: 154 ANKSNNTPTLDSLARDLTVIAKDGTLDPVIGRDKEITRVIEVLSRRTKNNPVLIGEPGVG 213
Query: 76 KTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDE 135
KTAIAEGLAQ I + +VP+T++GK+V++LDMG +VAGTKYRGEFEERLKK+MEEI Q+
Sbjct: 214 KTAIAEGLAQAIVNNEVPETLKGKRVMSLDMGTVVAGTKYRGEFEERLKKVMEEIHQAGN 273
Query: 136 IILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERR 195
+ILFIDE+HTL+GAG AEGAIDA+NILKP+LARGELQCIGATTLDEYRK+IEKD ALERR
Sbjct: 274 VILFIDELHTLVGAGGAEGAIDASNILKPALARGELQCIGATTLDEYRKNIEKDAALERR 333
Query: 196 FQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAID 255
FQPV+V EP+V++TI+ILKGLR+RYE HH++ +DEALVSAA+LS++Y+SDRFLPDKAID
Sbjct: 334 FQPVQVDEPTVEDTIEILKGLRDRYEAHHRINISDEALVSAAKLSHRYVSDRFLPDKAID 393
Query: 256 LIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQI 315
LIDEA S+VRL+ P +E+E+++ Q+ EK+ AV Q+FE A LRD++ L+ Q
Sbjct: 394 LIDEASSKVRLKSHTTPPNLKEIEQQIEQVKNEKDAAVHAQEFENAANLRDKQTKLEKQY 453
Query: 316 SALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLH 375
K T+ GD ++E DI +++ WTGIP+ K++ ESDRLL +E+TLH
Sbjct: 454 EEANTNWK-----NTQNGD-NTSLSEEDIGEVIAGWTGIPLTKINETESDRLLNLEDTLH 507
Query: 376 KRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEE 435
RVIGQ +AV +IS+A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+ALA FG ++
Sbjct: 508 NRVIGQKDAVTSISKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGEDD 567
Query: 436 AMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVF 495
AMIR+DMSEFME+H VS+L+G+PPGYVG+ +GGQLTE VRR+PY+V+LFDEIEKAHPDVF
Sbjct: 568 AMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKVRRKPYSVILFDEIEKAHPDVF 627
Query: 496 NMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNR 555
N++LQ+L+DG LTD+KGR VDF+NT++IMTSNVG+ ++ R GF + +D Y
Sbjct: 628 NILLQVLDDGHLTDTKGRRVDFRNTVIIMTSNVGAQELQD-QRFAGFGGATEGQD--YES 684
Query: 556 IKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVT 615
I+ + +ELK FRPEFLNR+D++IVF +L+K E+K+I +M+ ++ +RL +DI + VT
Sbjct: 685 IRKTMMKELKNAFRPEFLNRVDDIIVFHKLSKDELKQIVTMMVNKLTNRLSEQDINISVT 744
Query: 616 ERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVD 668
E +E++ EEGY+P YGARPL RAI + +ED+++E +L EG V +D D
Sbjct: 745 EAAKEKIAEEGYDPEYGARPLIRAIQKTVEDNLSELILDGNQIEGKEVKIDHD 797
>gi|261409551|ref|YP_003245792.1| ATPase AAA-2 domain-containing protein [Paenibacillus sp. Y412MC10]
gi|261286014|gb|ACX67985.1| ATPase AAA-2 domain protein [Paenibacillus sp. Y412MC10]
Length = 818
Score = 807 bits (2084), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/684 (58%), Positives = 524/684 (76%), Gaps = 11/684 (1%)
Query: 5 STEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKN 64
S+EAV + G PTL+ +LT +A+EG LDPV+GR +IERV+Q+L RRTKN
Sbjct: 144 SSEAVSSH-HGTPQNVSTPTLDSLARDLTAIAKEGNLDPVIGRSKEIERVIQVLSRRTKN 202
Query: 65 NPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLK 124
NP LIGEPGVGKTAIAEGLAQRI + ++P+T+ K+V+TLDMG +VAGTKYRGEFE+RLK
Sbjct: 203 NPVLIGEPGVGKTAIAEGLAQRIINNEIPETLRDKRVMTLDMGSVVAGTKYRGEFEDRLK 262
Query: 125 KLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRK 184
K+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTLDEYRK
Sbjct: 263 KIMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEYRK 322
Query: 185 HIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYI 244
+IEKD ALERRFQP+ V +PS +E IQIL GLR+RYE HH+++ TDEA+ A +LS +YI
Sbjct: 323 YIEKDAALERRFQPITVDQPSPEEAIQILYGLRDRYEAHHRVKITDEAIEQAVKLSDRYI 382
Query: 245 SDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGEL 304
+DRFLPDKAIDLIDEAGS+VRL +P ++ E L I KEK+ AV+ Q+FEKA L
Sbjct: 383 TDRFLPDKAIDLIDEAGSKVRLHTYTIPPNLKDQEAHLEDIRKEKDAAVQSQEFEKAAAL 442
Query: 305 RDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDES 364
RD E L+ ++ ++ KE + G VT DI +V+ WTGIPV K+ +E+
Sbjct: 443 RDTEQKLREELEVTKNQWKE------KQGRTDSEVTPEDIADVVANWTGIPVNKLKEEET 496
Query: 365 DRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAK 424
+RLL +EE LH RVIGQ+EAVKA+SRA+RRAR GLK+P RP+ SFIF GPTGVGK+ELA+
Sbjct: 497 ERLLNLEEILHSRVIGQEEAVKAVSRAVRRARAGLKDPKRPMGSFIFLGPTGVGKTELAR 556
Query: 425 ALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLF 484
ALA FG E A++R+DMSE+ME+H+ S+L+G+PPGYVGY EGGQLTE VRR+PY+VVL
Sbjct: 557 ALAEAMFGDENAVVRIDMSEYMEKHSTSRLVGAPPGYVGYEEGGQLTEKVRRKPYSVVLL 616
Query: 485 DEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDL 544
DEIEKAHP+VFN++LQ+LEDGRLTDSKGR VDF+NTL+I+TSNVG+ I+K +GF
Sbjct: 617 DEIEKAHPEVFNILLQVLEDGRLTDSKGRVVDFRNTLIILTSNVGAEAIKKNS-TLGFTA 675
Query: 545 DYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDR 604
D YN +K V +ELK+ FRPEFLNR+DE+IVF L + + EI +M E+ R
Sbjct: 676 VTD-AGRDYNNMKGKVMDELKKSFRPEFLNRIDEIIVFHSLEEKHIAEIVTLMSDELRKR 734
Query: 605 LKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVI 664
LK ++ ++T++ + + +EGY+P++GARPLRRAI + +ED ++E++L + +GDS++
Sbjct: 735 LKEFEVHFELTDKAKAFIAKEGYDPAFGARPLRRAIQKHIEDRLSEELLKGNVTKGDSLV 794
Query: 665 VDVDSDGNVTVLNGSSGAPESLAD 688
+D +++G + V+N S G + A+
Sbjct: 795 ID-EANGEL-VVNKSEGVTAASAE 816
>gi|374320677|ref|YP_005073806.1| Negative regulator of genetic competence clpC/mecB [Paenibacillus
terrae HPL-003]
gi|357199686|gb|AET57583.1| Negative regulator of genetic competence clpC/mecB [Paenibacillus
terrae HPL-003]
Length = 814
Score = 806 bits (2083), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/671 (58%), Positives = 519/671 (77%), Gaps = 10/671 (1%)
Query: 5 STEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKN 64
S+EAV + G + PTL+ +LT A+E LDPV+GR +IERV+Q+L RRTKN
Sbjct: 144 SSEAVSSH-HGAPANVSTPTLDSLARDLTASAKENNLDPVIGRSKEIERVIQVLSRRTKN 202
Query: 65 NPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLK 124
NP LIGEPGVGKTAIAEGLAQ+I + ++P+T+ K+V+TLDMG +VAGTKYRGEFE+RLK
Sbjct: 203 NPVLIGEPGVGKTAIAEGLAQKIIANEIPETLRDKRVMTLDMGSVVAGTKYRGEFEDRLK 262
Query: 125 KLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRK 184
K+M+EI+Q+ I+LFIDE+HTLIGAG AEGAIDA+NILKP+LARGELQCIGATTLDEYRK
Sbjct: 263 KIMDEIRQAGNIVLFIDELHTLIGAGGAEGAIDASNILKPALARGELQCIGATTLDEYRK 322
Query: 185 HIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYI 244
+IEKD ALERRFQP+ V +PS +E +QIL GLR+RYE HH+++ TDEA+ +A +LS +YI
Sbjct: 323 YIEKDAALERRFQPITVDQPSPEEAVQILYGLRDRYEAHHRVKITDEAIEAAVKLSDRYI 382
Query: 245 SDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGEL 304
+DRFLPDKAIDLIDEAGS+VRL +P ++LE L I KEK+ AV+ Q+FEKA L
Sbjct: 383 TDRFLPDKAIDLIDEAGSKVRLNSYTVPPNLKQLENRLEDIRKEKDSAVQSQEFEKAAAL 442
Query: 305 RDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDES 364
RD E ++ ++ ++ KE + G VT DI +V+ WTG+PV ++ +E+
Sbjct: 443 RDTEQKIREELDVTKNQWKE------QQGRTDSEVTPEDIAQVVAIWTGVPVSQLKEEET 496
Query: 365 DRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAK 424
RLL MEE LH RVIGQDEAVKA+SRAIRRAR GLK+P RPI SFIF GPTGVGK+ELA+
Sbjct: 497 HRLLNMEELLHGRVIGQDEAVKAVSRAIRRARAGLKDPKRPIGSFIFLGPTGVGKTELAR 556
Query: 425 ALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLF 484
ALA FG E A+IR+DMSE+ME+H+ S+L+G+PPGYVGY EGGQLTE VRR+PY+VVL
Sbjct: 557 ALAESMFGDENAVIRIDMSEYMEKHSTSRLVGAPPGYVGYEEGGQLTEKVRRKPYSVVLL 616
Query: 485 DEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDL 544
DEIEKAHP+VFN++LQ+LEDGRLTDSKGR VDF+NTL+I+TSNVG+ VI++ +GF
Sbjct: 617 DEIEKAHPEVFNILLQVLEDGRLTDSKGRVVDFRNTLIILTSNVGAQVIKRNS-TLGFTA 675
Query: 545 DYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDR 604
D + Y+ +K V EELK+ FRPEFLNR+DE+IVF L + + EI +M +E+ R
Sbjct: 676 VVD-AGADYDNMKGKVMEELKKSFRPEFLNRIDEIIVFHSLEEKHIAEIVSLMSEELRKR 734
Query: 605 LKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVI 664
L +++ ++T++ + + +EG++P+YGARPLRRAI + +ED ++E++L I +GDS+
Sbjct: 735 LNEYEVDFELTDKAKAFLAKEGFDPAYGARPLRRAIQKHIEDRLSEELLTGNITKGDSLF 794
Query: 665 VDVDSDGNVTV 675
+D + +G +TV
Sbjct: 795 ID-EENGALTV 804
>gi|414161188|ref|ZP_11417449.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
simulans ACS-120-V-Sch1]
gi|410876450|gb|EKS24356.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
simulans ACS-120-V-Sch1]
Length = 821
Score = 806 bits (2083), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/654 (59%), Positives = 511/654 (78%), Gaps = 8/654 (1%)
Query: 17 SSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGK 76
+ N PTL+ +LT +A++G LDPVVGR +I RV+++L RRTKNNP LIGEPGVGK
Sbjct: 155 AKSNNTPTLDGLARDLTVIAKDGTLDPVVGRDKEITRVIEVLSRRTKNNPVLIGEPGVGK 214
Query: 77 TAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEI 136
TAIAEGLAQ I + +VP+T++GK+V++LDMG +VAGTKYRGEFEERLKK+MEEI Q+ +
Sbjct: 215 TAIAEGLAQAIVNNEVPETLKGKRVMSLDMGTVVAGTKYRGEFEERLKKVMEEIHQAGNV 274
Query: 137 ILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRF 196
ILFIDE+HTLIGAG AEGAIDA+NILKP+LARGELQ IGATTLDEYRKHIEKD ALERRF
Sbjct: 275 ILFIDELHTLIGAGGAEGAIDASNILKPALARGELQAIGATTLDEYRKHIEKDAALERRF 334
Query: 197 QPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDL 256
QPV+V EP+V++TI ILKGLR+RYE HH++ +DEA+ +AA+LS +Y+SDRFLPDKAIDL
Sbjct: 335 QPVQVDEPTVEDTILILKGLRDRYEAHHRINISDEAVEAAARLSGRYVSDRFLPDKAIDL 394
Query: 257 IDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQIS 316
IDEA S+VRL+ P +E+E+E+ ++ EK+ AV Q+FE A LRD++ L+ Q
Sbjct: 395 IDEASSKVRLKSHTTPSNLKEIEQEIEKVKNEKDAAVHSQEFENAANLRDKQTKLEKQYE 454
Query: 317 ALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHK 376
++ K + G +TE DI +++ WTGIP+ +++ ES+RLL +E+TLHK
Sbjct: 455 EAKNEWK------NKQGGANTSLTENDIAEVIAGWTGIPLTRLNETESERLLNLEDTLHK 508
Query: 377 RVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEA 436
RVIGQ +AV +IS+A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+ALA FG E+A
Sbjct: 509 RVIGQKDAVTSISKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGDEDA 568
Query: 437 MIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFN 496
MIR+DMSEFME+H VS+L+G+PPGYVG+ +GGQLTE VRR+PY+V+LFDE+EKAHPDVFN
Sbjct: 569 MIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKVRRKPYSVILFDEVEKAHPDVFN 628
Query: 497 MMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRI 556
+MLQ+L+DG LTD+KGR VDF+NT++IMTSNVG+ ++ R GF DE + Y I
Sbjct: 629 IMLQVLDDGFLTDTKGRRVDFRNTVIIMTSNVGAQELQD-QRFAGFGGGSDE-GADYETI 686
Query: 557 KSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTE 616
+S + +ELK FRPEFLNR+D++IVF +L K E+KEI M+ + DRL +DI ++VTE
Sbjct: 687 RSTMMKELKNAFRPEFLNRVDDIIVFHKLDKAELKEIVTKMVSNLTDRLSEQDINIEVTE 746
Query: 617 RFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSD 670
+E++ EEGY+P YGARPL RAI + +ED+++E +L EG V+VD + D
Sbjct: 747 AAKEKIAEEGYDPQYGARPLIRAIQKTVEDNLSELILDGNQLEGKDVVVDHNGD 800
>gi|425437168|ref|ZP_18817593.1| ATP-dependent Clp protease ATP-binding subunit clpA homolog
[Microcystis aeruginosa PCC 9432]
gi|389677887|emb|CCH93205.1| ATP-dependent Clp protease ATP-binding subunit clpA homolog
[Microcystis aeruginosa PCC 9432]
Length = 795
Score = 806 bits (2082), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/651 (60%), Positives = 500/651 (76%), Gaps = 45/651 (6%)
Query: 25 LEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLA 84
L +YG NL++ + GK+DPV+GR+P+IERVVQILGRRTK+NP L+G PGVGKTAIAEGLA
Sbjct: 169 LAQYGRNLSQEVKNGKIDPVIGREPEIERVVQILGRRTKSNPILLGAPGVGKTAIAEGLA 228
Query: 85 QRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVH 144
QRI SGD+P+ ++ K+VI LDMG L+AGT++RG+FEERLK ++EE+++S IILFIDE+H
Sbjct: 229 QRIHSGDIPELLQDKQVIALDMGSLLAGTRFRGDFEERLKGIVEEVRKSGSIILFIDEIH 288
Query: 145 TLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEP 204
TL+GAG+ GA+DA+N+LKP+LARGELQC+GATTLDEY++HIE+D ALERRFQPV V EP
Sbjct: 289 TLVGAGSMGGAMDASNLLKPALARGELQCLGATTLDEYKQHIERDAALERRFQPVMVGEP 348
Query: 205 SVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRV 264
+ ++ I+IL+GL+ YE H+++Y +A+ +A LS +YI+DRFLPDKAIDL+DEAGSR
Sbjct: 349 TKEQAIEILRGLKATYEDFHQVKYDQKAIEAAVHLSSRYINDRFLPDKAIDLLDEAGSRT 408
Query: 265 RLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKE 324
LR++ + E+ +E I E +L+
Sbjct: 409 HLRYSLQSKSPAEVSEESPLINPE----------------------------SLI----- 435
Query: 325 MSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEA 384
PVV +I IV+AWTGIPV +++ ES+ LL +E LH+R+IGQ EA
Sbjct: 436 ------------PVVDAEEIAQIVAAWTGIPVTQLTETESESLLNLESQLHERIIGQQEA 483
Query: 385 VKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSE 444
V A+SRAIRRARV LKNPNRPIASFIF+GPTGVGK+EL KALA FGSE +MIRLDMSE
Sbjct: 484 VNAVSRAIRRARVNLKNPNRPIASFIFAGPTGVGKTELTKALAKLLFGSESSMIRLDMSE 543
Query: 445 FMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILED 504
FME HTVSKLIG+PPGY+GY EGGQLTEAVRR+PY VVLFDEIEKAHPDVFN++LQ+LED
Sbjct: 544 FMESHTVSKLIGAPPGYIGYNEGGQLTEAVRRQPYRVVLFDEIEKAHPDVFNLLLQLLED 603
Query: 505 GRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEEL 564
GRLTDS+GR VDFKNTL+IMTSN+GS VIEKGG +GF++ D S Y +I + VT+EL
Sbjct: 604 GRLTDSQGRRVDFKNTLIIMTSNIGSKVIEKGGNSLGFEMADDFAQSRYQQISNRVTDEL 663
Query: 565 KQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVE 624
KQYFRPEFLNRLDE+IVFRQLT+ EV +IADI++ ++ +L K I +QVT F++ V+
Sbjct: 664 KQYFRPEFLNRLDEIIVFRQLTREEVTQIADILIADLAKQLTEKGISVQVTAAFKDLVIN 723
Query: 625 EGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTV 675
EGY+PSYGARPLRRA+ R LEDS+AE ML+ ++ GD ++DV ++ VTV
Sbjct: 724 EGYDPSYGARPLRRALTRRLEDSLAEAMLSGKVNSGDHALLDVTAEAVVTV 774
>gi|304405673|ref|ZP_07387332.1| ATPase AAA-2 domain protein [Paenibacillus curdlanolyticus YK9]
gi|304345712|gb|EFM11547.1| ATPase AAA-2 domain protein [Paenibacillus curdlanolyticus YK9]
Length = 822
Score = 806 bits (2081), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/681 (59%), Positives = 522/681 (76%), Gaps = 11/681 (1%)
Query: 5 STEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKN 64
S+EAV + G + PTL+ +LT A EG LDPV+GR +IERV+Q+L RRTKN
Sbjct: 144 SSEAVSSS-HGAPANVSTPTLDGLARDLTAFAREGNLDPVIGRSKEIERVIQVLSRRTKN 202
Query: 65 NPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLK 124
NP LIGEPGVGKTAIAEGLAQ+I +G++P+T+ K+V+TLDMG +VAGTKYRGEFE+RLK
Sbjct: 203 NPVLIGEPGVGKTAIAEGLAQKIIAGEIPETLRDKRVMTLDMGSVVAGTKYRGEFEDRLK 262
Query: 125 KLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRK 184
K+M+EI+Q++ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTLDEYRK
Sbjct: 263 KIMDEIRQANNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEYRK 322
Query: 185 HIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYI 244
+IEKD ALERRFQP+ V +PS +E IQIL GLR+RYE HH+++ TDEA+ A +LS +YI
Sbjct: 323 YIEKDAALERRFQPITVDQPSPEEAIQILHGLRDRYEAHHRVKITDEAIEQAVKLSDRYI 382
Query: 245 SDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGEL 304
+DRFLPDKAIDLIDEA S+VRL+ +P + LE L I KEK+ AV+ Q+FEKA L
Sbjct: 383 TDRFLPDKAIDLIDEASSKVRLKTYTVPPNLKLLENRLEDIRKEKDSAVQSQEFEKAAAL 442
Query: 305 RDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDES 364
RD E L+ ++ ++ KE + G VT DI +V++WTG+PV K++ +E+
Sbjct: 443 RDTEQKLREELDITRNQWKE------KQGRTDSEVTPEDIAQVVASWTGVPVSKLAEEET 496
Query: 365 DRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAK 424
RLLKMEE LH RVIGQ +AVKA+SRAIRRAR GLK+P RPI SFIF GPTGVGK+ELA+
Sbjct: 497 QRLLKMEEILHDRVIGQTDAVKAVSRAIRRARAGLKDPKRPIGSFIFLGPTGVGKTELAR 556
Query: 425 ALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLF 484
ALA FG E A+IR+DMSE+ME+H+ S+L+G+PPGYVGY EGGQLTE VRR+PY+VVL
Sbjct: 557 ALAESIFGDENAVIRIDMSEYMEKHSTSRLVGAPPGYVGYEEGGQLTEKVRRKPYSVVLL 616
Query: 485 DEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDL 544
DEIEKAHP+VFN++LQ+LEDGRLTDSKGR VDF+NTL+IMTSNVG+ I++ +GF
Sbjct: 617 DEIEKAHPEVFNILLQVLEDGRLTDSKGRVVDFRNTLIIMTSNVGADQIKRNS-TLGFTA 675
Query: 545 DYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDR 604
D + ++K V ELK+ FRPEFLNR+DE IVF L + + +I +M +E+ R
Sbjct: 676 VQD-SGREFIQMKDKVMGELKKSFRPEFLNRIDETIVFHSLEQEHIAQIVTLMSEELRKR 734
Query: 605 LKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVI 664
LK ++++ +TE + + +EG++P YGARPLRRAI + +ED ++E +L I +GD+++
Sbjct: 735 LKEQEVDFSLTEAAKNFLAKEGFDPQYGARPLRRAIQKHIEDRLSEDLLMGTITKGDTLL 794
Query: 665 VDVDSDGNVTVLNGSSGAPES 685
+D + DG + V++ SS PE+
Sbjct: 795 ID-EKDGAL-VVHRSSAEPEA 813
>gi|329929240|ref|ZP_08282999.1| negative regulator of genetic competence ClpC/MecB [Paenibacillus
sp. HGF5]
gi|328936799|gb|EGG33238.1| negative regulator of genetic competence ClpC/MecB [Paenibacillus
sp. HGF5]
Length = 818
Score = 806 bits (2081), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/676 (58%), Positives = 518/676 (76%), Gaps = 10/676 (1%)
Query: 5 STEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKN 64
S+EAV + G PTL+ +LT +A+EG LDPV+GR +IERV+Q+L RRTKN
Sbjct: 144 SSEAVSSH-HGTPQNVSTPTLDSLARDLTAIAKEGNLDPVIGRSKEIERVIQVLSRRTKN 202
Query: 65 NPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLK 124
NP LIGEPGVGKTAIAEGLAQRI + ++P+T+ K+V+TLDMG +VAGTKYRGEFE+RLK
Sbjct: 203 NPVLIGEPGVGKTAIAEGLAQRIINNEIPETLRDKRVMTLDMGSVVAGTKYRGEFEDRLK 262
Query: 125 KLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRK 184
K+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTLDEYRK
Sbjct: 263 KIMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEYRK 322
Query: 185 HIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYI 244
+IEKD ALERRFQP+ V +PS +E IQIL GLR+RYE HH+++ TDEA+ A +LS +YI
Sbjct: 323 YIEKDAALERRFQPITVDQPSPEEAIQILYGLRDRYEAHHRVKITDEAIEQAVKLSDRYI 382
Query: 245 SDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGEL 304
+DRFLPDKAIDLIDEAGS+VRL +P ++ E L I KEK+ AV+ Q+FEKA L
Sbjct: 383 TDRFLPDKAIDLIDEAGSKVRLHTYTIPPNLKDQEAHLEDIRKEKDAAVQSQEFEKAAAL 442
Query: 305 RDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDES 364
RD E L+ ++ ++ KE + G VT DI +V+ WTGIPV K+ +E+
Sbjct: 443 RDTEQKLREELEVTKNQWKE------KQGRTDSEVTPEDIADVVANWTGIPVNKLKEEET 496
Query: 365 DRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAK 424
+RLL +EE LH RVIGQ+EAVKA+SRA+RRAR GLK+P RP+ SFIF GPTGVGK+ELA+
Sbjct: 497 ERLLNLEEILHSRVIGQEEAVKAVSRAVRRARAGLKDPKRPMGSFIFLGPTGVGKTELAR 556
Query: 425 ALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLF 484
ALA FG E A++R+DMSE+ME+H+ S+L+G+PPGYVGY EGGQLTE VRR+PY+VVL
Sbjct: 557 ALAEAMFGDENAVVRIDMSEYMEKHSTSRLVGAPPGYVGYEEGGQLTEKVRRKPYSVVLL 616
Query: 485 DEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDL 544
DEIEKAHP+VFN++LQ+LEDGRLTDSKGR VDF+NTL+I+TSNVG+ I+K +GF
Sbjct: 617 DEIEKAHPEVFNILLQVLEDGRLTDSKGRVVDFRNTLIILTSNVGAEAIKKNS-TLGFTA 675
Query: 545 DYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDR 604
D YN +K V +ELK+ FRPEFLNR+DE+IVF L + + EI +M E+ R
Sbjct: 676 VTD-AGRDYNNMKGKVMDELKKSFRPEFLNRIDEIIVFHSLEEKHIAEIVTLMSDELRKR 734
Query: 605 LKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVI 664
LK ++ ++T++ + + +EGY+P++GARPLRRAI + +ED ++E++L + +GDS++
Sbjct: 735 LKEFEVHFELTDKAKAFIAKEGYDPAFGARPLRRAIQKHIEDRLSEELLKGNVAKGDSLV 794
Query: 665 VDVDSDGNVTVLNGSS 680
+D +++G + V S
Sbjct: 795 ID-EANGELVVNKNQS 809
>gi|188584788|ref|YP_001916333.1| ATPase AAA [Natranaerobius thermophilus JW/NM-WN-LF]
gi|179349475|gb|ACB83745.1| ATPase AAA-2 domain protein [Natranaerobius thermophilus
JW/NM-WN-LF]
Length = 814
Score = 806 bits (2081), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/676 (59%), Positives = 534/676 (78%), Gaps = 15/676 (2%)
Query: 1 MVGESTEAVGAGVGGGSSGNKM------PTLEEYGTNLTKLAEEGKLDPVVGRQPQIERV 54
++G S + G G + KM PTL+ +G +LTKLAEEGKLDPV+GR+ +IERV
Sbjct: 141 IIGGSQQPKGQANFGQAQNPKMANRDKTPTLDNFGRDLTKLAEEGKLDPVIGRKKEIERV 200
Query: 55 VQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTK 114
+Q+L RRTKNNPCLIGEPGVGKTAIAEGLAQ+I G+VP +E K+V+TL++ +VAGTK
Sbjct: 201 IQVLSRRTKNNPCLIGEPGVGKTAIAEGLAQKIIEGEVPKILENKRVVTLELSAVVAGTK 260
Query: 115 YRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCI 174
YRGEFEERL+KL++E+ S E+I+FIDE+HT+IGAGAAEGAIDA+NILKP+LA+GELQCI
Sbjct: 261 YRGEFEERLRKLIDELTDSGEVIIFIDEIHTMIGAGAAEGAIDASNILKPALAKGELQCI 320
Query: 175 GATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALV 234
GATTLDEYRK+IEKD ALERRFQPV V EPS + T++ILKGLR+RYE HH+++ TD+A+
Sbjct: 321 GATTLDEYRKYIEKDSALERRFQPVTVDEPSKEATVEILKGLRDRYEAHHRVQITDDAIE 380
Query: 235 SAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVR 294
++ ++S +YI+DR+LPDKAIDLIDEA S V+L+ P + R+LE++L +I KEK AV+
Sbjct: 381 ASVKMSDRYITDRYLPDKAIDLIDEAASNVKLKTNTAPPDMRKLEEDLEEIEKEKEAAVK 440
Query: 295 GQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGI 354
QDFE+A +LRD+E ++K ++ + +K E + EA VTE DI IVS WTGI
Sbjct: 441 SQDFEQAAKLRDKEQEIKKELEDM-EKSWEKKQLSDEAQ-----VTEEDIARIVSDWTGI 494
Query: 355 PVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGP 414
PV++++ +E++RLL ME+ LH+RV+GQ+EAV+++S AIRRAR GLK+P RPI SFIF GP
Sbjct: 495 PVKRLAQEETERLLNMEDALHQRVVGQEEAVQSVSNAIRRARSGLKDPKRPIGSFIFLGP 554
Query: 415 TGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAV 474
TGVGK+ELA+ALA FG E+AMIRLDMSE+ME+HTVS+L+GSPPGYVG+ E GQLTE V
Sbjct: 555 TGVGKTELARALADVLFGDEDAMIRLDMSEYMEKHTVSRLLGSPPGYVGHEESGQLTEKV 614
Query: 475 RRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIE 534
RRRPY+V+L DEIEKAHP+VFN +LQ+LEDGRLTD+KGRTVDF+NT++IMTSNVG+++I
Sbjct: 615 RRRPYSVILLDEIEKAHPEVFNTLLQVLEDGRLTDAKGRTVDFRNTVIIMTSNVGANLI- 673
Query: 535 KGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIA 594
+ ++GF E SY +K V ELK FRPEFLNR+DE+IVF L K + +I
Sbjct: 674 RNESKVGFKPQTSE--DSYKEMKDNVMSELKNSFRPEFLNRVDEVIVFHALEKEHLSDIV 731
Query: 595 DIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLA 654
++ML+E+ +R+ ++ L+ TE ++ + E+GY+P+YGARPLRR I + +ED ++EKML+
Sbjct: 732 ELMLEELKERMAEFNMNLEFTEESKKHLAEQGYDPTYGARPLRRVIQKQVEDVLSEKMLS 791
Query: 655 REIKEGDSVIVDVDSD 670
E G++V++D + +
Sbjct: 792 GEFAHGETVVIDAEDN 807
>gi|146297365|ref|YP_001181136.1| ATPase AAA-2 domain-containing protein [Caldicellulosiruptor
saccharolyticus DSM 8903]
gi|145410941|gb|ABP67945.1| ATPase AAA-2 domain protein [Caldicellulosiruptor saccharolyticus
DSM 8903]
Length = 830
Score = 806 bits (2081), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/664 (59%), Positives = 525/664 (79%), Gaps = 9/664 (1%)
Query: 23 PTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEG 82
PTL ++ +LT+LA EGK+DPV+GR+ +IERV+QIL RRTKNNPCLIGEPGVGKTAI EG
Sbjct: 168 PTLNQFSRDLTQLALEGKIDPVIGREKEIERVIQILSRRTKNNPCLIGEPGVGKTAIVEG 227
Query: 83 LAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDE 142
LAQ+I G+VP+ + K+V+ LD+ +VAG+K+RGEFEERLKK MEE++++ +ILFIDE
Sbjct: 228 LAQKIVEGNVPELLRNKRVVALDLSAMVAGSKFRGEFEERLKKAMEEVRKAGNVILFIDE 287
Query: 143 VHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVP 202
+HT+IGAGAAEGAIDA+NILKP+LARGE+Q IGATTLDEYRKHIEKD ALERRFQP+ V
Sbjct: 288 MHTIIGAGAAEGAIDASNILKPALARGEIQVIGATTLDEYRKHIEKDAALERRFQPILVG 347
Query: 203 EPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGS 262
EP+ +ET+QILKGLR++YE HH ++ TDEA+ +A LS +YI+DR+LPDKAIDLIDEA S
Sbjct: 348 EPTPEETVQILKGLRDKYEAHHGVKITDEAIKAAVDLSTKYITDRYLPDKAIDLIDEAAS 407
Query: 263 RVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKG 322
RVRL+ LP +E E+++ ++ KEK EA+R Q++EKA ++RD + L+ ++ + +
Sbjct: 408 RVRLKMYTLPPHVKEHEEKIEKLEKEKEEAIRLQEYEKAAKIRDEIIKLRQELEKVKNSW 467
Query: 323 -KEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQ 381
+ KA+ P+VTE DI +IV++WTGIPV K++ DES+RLLK+EE LHKRV+GQ
Sbjct: 468 TNDQQKAQ-------PIVTENDIAYIVASWTGIPVNKLTEDESERLLKLEEVLHKRVVGQ 520
Query: 382 DEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLD 441
DEAV+A++RAIRR RVGLK+P RPI SFIF GPTGVGK+EL +ALA FG+E+A+IR+D
Sbjct: 521 DEAVRAVARAIRRGRVGLKDPKRPIGSFIFLGPTGVGKTELCRALAEALFGTEDALIRID 580
Query: 442 MSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQI 501
MSE+ME+ VSKLIGSPPGYVGY EGGQLTE VRRRPY+VVLFDEIEKAHPDVFN++LQI
Sbjct: 581 MSEYMEKFNVSKLIGSPPGYVGYEEGGQLTEKVRRRPYSVVLFDEIEKAHPDVFNLLLQI 640
Query: 502 LEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVT 561
L+DGRLTDS+GRTV F+NT++IMTSN+G+ +I +++GF DEK +Y +IK V
Sbjct: 641 LDDGRLTDSQGRTVSFRNTVIIMTSNIGAQLI-TNPKKLGFSTSEDEKQRTYEQIKESVM 699
Query: 562 EELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRER 621
ELK+ FRPEFLNR+DE+IVF L + +VK+I +I+L + +R+K+ + + T E
Sbjct: 700 GELKKTFRPEFLNRIDEIIVFHPLDEEDVKKIVEILLNNLKERIKSSEYYAEFTPALVEA 759
Query: 622 VVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNGSSG 681
+ ++G++P +GARPL+RAI ++ED ++E +L +IK+GD IVD D V S
Sbjct: 760 IAKKGFDPLFGARPLKRAIQTMVEDKISEAILEGQIKQGDKFIVDYVDDKTVITKKEKSS 819
Query: 682 APES 685
+ E+
Sbjct: 820 SSET 823
>gi|297582418|ref|YP_003698198.1| ATPase AAA-2 domain-containing protein [Bacillus selenitireducens
MLS10]
gi|297140875|gb|ADH97632.1| ATPase AAA-2 domain protein [Bacillus selenitireducens MLS10]
Length = 815
Score = 805 bits (2080), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 394/661 (59%), Positives = 520/661 (78%), Gaps = 10/661 (1%)
Query: 15 GGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGV 74
GG +G PTL+ +LT +A+EG++DPV+GR +I+RV+QIL RRTKNNP LIGEPGV
Sbjct: 159 GGQAGASTPTLDSLARDLTAIAKEGQVDPVIGRSKEIQRVIQILSRRTKNNPVLIGEPGV 218
Query: 75 GKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSD 134
GKTAI+EGLAQ+I +VP+ + K+V+TLDMG +VAGTKYRGEFE+RLKK+M+EI+ +
Sbjct: 219 GKTAISEGLAQQIVDNEVPEILRNKRVMTLDMGTVVAGTKYRGEFEDRLKKVMDEIRNAG 278
Query: 135 EIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALER 194
+ILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATT+DEYRK+IEKD ALER
Sbjct: 279 NVILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTMDEYRKYIEKDAALER 338
Query: 195 RFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAI 254
RFQP++V EP+V+E++QIL GLR+RYE HH++ TDEA+ +A ++S +YISDRFLPDKAI
Sbjct: 339 RFQPIQVDEPTVEESVQILAGLRDRYEAHHRVTITDEAIKAAVEMSDRYISDRFLPDKAI 398
Query: 255 DLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQ 314
DLIDEAGS+VRL P +E E+EL ++ KEK+ +V+ Q+FEKA LRD E LK +
Sbjct: 399 DLIDEAGSKVRLSTYTAPPNLKEKEQELEELRKEKDASVQSQEFEKAASLRDNEQKLKDE 458
Query: 315 ISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETL 374
+ L D+ K+ E VT DI +VS WTG+PV K++ +E+DRLLKME+ L
Sbjct: 459 LETLKDEWKKKQGQEDSE------VTMEDIAQVVSTWTGVPVSKLAEEETDRLLKMEDIL 512
Query: 375 HKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSE 434
H RVIGQDEAV A+S+A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+A+A FG E
Sbjct: 513 HGRVIGQDEAVTAVSKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARAVAETLFGDE 572
Query: 435 EAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDV 494
+A+IR+DMSE+ME+H S+L+GSPPGYVG+ EGGQLTE VRR+PY+V+L DEIEKAHP+V
Sbjct: 573 DAIIRIDMSEYMEKHNTSRLVGSPPGYVGHDEGGQLTEKVRRKPYSVILLDEIEKAHPEV 632
Query: 495 FNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYN 554
FN++LQ+LEDG LTDSKGR VDF+NT +IMTSNVG+ + K + +GF +++D+ Y
Sbjct: 633 FNILLQVLEDGFLTDSKGRRVDFRNTAVIMTSNVGAQAL-KQEKSLGF--TANQEDAKYK 689
Query: 555 RIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQV 614
+KS V EELK+ FRPEFLNR+DE IVF L K + EI +M E+ RLK ++I+ ++
Sbjct: 690 DMKSKVMEELKKSFRPEFLNRIDETIVFHSLEKSHISEIVTLMAGELQKRLKEQEIDFEL 749
Query: 615 TERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVT 674
+++ +E++ +EG++P YGARPLRRA+ + +ED ++E++L I +G SV++DV+ DG
Sbjct: 750 SDKAKEKIADEGFDPEYGARPLRRALQKQVEDRLSEELLRGTISKGQSVVLDVE-DGEYV 808
Query: 675 V 675
V
Sbjct: 809 V 809
>gi|392969833|ref|ZP_10335245.1| ATP-dependent Clp protease ATP-binding subunit [Staphylococcus
equorum subsp. equorum Mu2]
gi|392512121|emb|CCI58441.1| ATP-dependent Clp protease ATP-binding subunit [Staphylococcus
equorum subsp. equorum Mu2]
Length = 820
Score = 805 bits (2080), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/656 (58%), Positives = 512/656 (78%), Gaps = 11/656 (1%)
Query: 16 GSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVG 75
+ N PTL+ +LT +A++G LDPV+GR +I RV+++L RRTKNNP LIGEPGVG
Sbjct: 154 ANKSNNTPTLDSLARDLTVIAKDGTLDPVIGRDKEITRVIEVLSRRTKNNPVLIGEPGVG 213
Query: 76 KTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDE 135
KTAIAEGLAQ I +VP+T++GK+V++LDMG +VAGTKYRGEFEERLKK+MEEI Q+ +
Sbjct: 214 KTAIAEGLAQSIIKNEVPETLKGKRVMSLDMGTVVAGTKYRGEFEERLKKVMEEIHQAGD 273
Query: 136 IILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERR 195
+ILFIDE+HTL+GAG AEGAIDA+NILKP+LARGELQCIGATTLDEYRK+IEKD ALERR
Sbjct: 274 VILFIDELHTLVGAGGAEGAIDASNILKPALARGELQCIGATTLDEYRKNIEKDAALERR 333
Query: 196 FQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAID 255
FQPV+V EP+V++TI+ILKGLR+RYE HH++ +DEA++SAA LS++Y+SDRFLPDKAID
Sbjct: 334 FQPVQVDEPTVEDTIEILKGLRDRYEAHHRINISDEAVISAATLSHRYVSDRFLPDKAID 393
Query: 256 LIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQI 315
LIDEA S+VRLR P +ELE+E+ Q+ EK+ AV Q+FE A LRD++ L+ Q
Sbjct: 394 LIDEASSKVRLRSHTTPPNLKELEQEIEQVKNEKDAAVHSQEFENAANLRDKQTKLEKQY 453
Query: 316 SALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLH 375
+ K + + ++E DI +++ WTGIP+ K++ ESDRLL +E+TLH
Sbjct: 454 EEANNNWKNAQNGDNTS------LSEEDIGEVIAGWTGIPLTKINETESDRLLNLEDTLH 507
Query: 376 KRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEE 435
RVIGQ AV +IS+A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+ALA FG ++
Sbjct: 508 NRVIGQKAAVTSISKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGEDD 567
Query: 436 AMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVF 495
AMIR+DMSEFME+H VS+L+G+PPGYVG+ +GGQLTE VRR+PY+V+LFDEIEKAHPDVF
Sbjct: 568 AMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKVRRKPYSVILFDEIEKAHPDVF 627
Query: 496 NMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNR 555
N++LQ+L+DG LTD+KGR VDF+NT++IMTSNVG+ ++ R GF + +D Y
Sbjct: 628 NILLQVLDDGHLTDTKGRRVDFRNTVIIMTSNVGAQELQD-QRFAGFGGASEGQD--YET 684
Query: 556 IKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVT 615
I++ + +ELK FRPEFLNR+D+ IVF +L+K E+KEI +M+ ++ RL +DI ++VT
Sbjct: 685 IRNTMMKELKNAFRPEFLNRVDDTIVFHKLSKEELKEIVTMMINKLTGRLSEQDINIEVT 744
Query: 616 ERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDG 671
+ +E++ EEGY+P YGARPL RAI + +ED+++E +L EG V++D DG
Sbjct: 745 DAAKEKIAEEGYDPEYGARPLIRAIQKTVEDNLSELILDGNQIEGKK--VEIDHDG 798
>gi|407797861|ref|ZP_11144776.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Salimicrobium
sp. MJ3]
gi|407017624|gb|EKE30381.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Salimicrobium
sp. MJ3]
Length = 821
Score = 805 bits (2079), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 388/660 (58%), Positives = 514/660 (77%), Gaps = 9/660 (1%)
Query: 23 PTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEG 82
PTL+ +LT +A+EG +DPV+GR +I+RV+Q+L RRTKNNP L+GEPGVGKTA+AEG
Sbjct: 171 PTLDSLAQDLTSIAKEGNVDPVIGRSEEIQRVIQVLSRRTKNNPVLVGEPGVGKTAVAEG 230
Query: 83 LAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDE 142
LAQ+I +VP+ + K+V+TLDMG +VAGTKYRGEFE+RLKK+MEEI+Q+ IILFIDE
Sbjct: 231 LAQQIVENEVPEILRDKRVMTLDMGTVVAGTKYRGEFEDRLKKVMEEIRQAGNIILFIDE 290
Query: 143 VHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVP 202
+HTLIGAG AEGAIDA+NILKPSLARG+LQCIGATTLDEYRK+IEKD ALERRFQP++V
Sbjct: 291 LHTLIGAGGAEGAIDASNILKPSLARGDLQCIGATTLDEYRKYIEKDAALERRFQPIQVD 350
Query: 203 EPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGS 262
EP+ +E+ QIL+GLR+RYE HH++ TDEA+ SA + S +YI+DRFLPDKAIDLIDEA S
Sbjct: 351 EPTTEESTQILQGLRDRYEAHHRVTITDEAIESAVRFSDRYITDRFLPDKAIDLIDEAAS 410
Query: 263 RVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKG 322
+VRLR P +ELE++L ++ KEK+ AV+ Q+FEKA LRD E L+ ++ K
Sbjct: 411 KVRLRSYTAPPNLKELEQKLEEVRKEKDAAVQSQEFEKAASLRDDEQKLREELEETQKKW 470
Query: 323 KEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQD 382
KE + G VT DI IVS WTG+PV+K++T+ES++LL +E+TLH RVIGQ+
Sbjct: 471 KE------KQGQEDSEVTVEDIASIVSLWTGVPVKKMTTEESEQLLHLEDTLHNRVIGQE 524
Query: 383 EAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDM 442
EAV ++++AIRRAR GLK+P RPI SFIF GPTGVGK+ELA+ALA FG E+AMIR+DM
Sbjct: 525 EAVDSVAKAIRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGEEDAMIRVDM 584
Query: 443 SEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQIL 502
SE+ME+H+ S+L+GSPPGYVGY EGGQLTE VR++PY+VVL DE+EKAHPDVFN++LQ+L
Sbjct: 585 SEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRQKPYSVVLLDEVEKAHPDVFNVLLQVL 644
Query: 503 EDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTE 562
EDGRLTD KGR VDF+NT+LIMTSNVG+ + K + +GF + +D + +KS VTE
Sbjct: 645 EDGRLTDGKGRVVDFRNTVLIMTSNVGAQEL-KENKYVGFSMGDQTQD--HKDMKSKVTE 701
Query: 563 ELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERV 622
ELK+ FRPEFLNR+DE IVF L + +K+I +M ++ RL ++I+ ++++ +
Sbjct: 702 ELKKAFRPEFLNRIDETIVFHALERKHMKDIVTLMADQLRTRLLEQEIDFTLSDKAISHI 761
Query: 623 VEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNGSSGA 682
EEG++P YGARPLRR++ + +ED ++E++L I +G V++D+D + V +S A
Sbjct: 762 AEEGFDPEYGARPLRRSLQKNVEDLLSEELLKESIHKGQKVVIDLDENNEFVVSTATSEA 821
>gi|403066584|ref|YP_006639073.1| ATP-dependent clp protease ATP-binding subunit (chloroplast)
[Saccharina japonica]
gi|378787497|gb|AFC40127.1| ATP-dependent clp protease ATP-binding subunit (chloroplast)
[Saccharina japonica]
Length = 894
Score = 805 bits (2079), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/658 (62%), Positives = 518/658 (78%), Gaps = 14/658 (2%)
Query: 23 PTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEG 82
P L EY T+LT+ AE KLDPVVGRQ +IERV+QIL RR KNNP LIGEPGVGKTA+AEG
Sbjct: 182 PNLLEYTTDLTEAAERAKLDPVVGRQNEIERVIQILSRRRKNNPILIGEPGVGKTAVAEG 241
Query: 83 LAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDE 142
LAQRI +VP + KV LD+ LL+AGTKYRGEFEERLK++++E+K+ II+ IDE
Sbjct: 242 LAQRIVQREVPSEMHDHKVFVLDITLLLAGTKYRGEFEERLKRIVQELKEQKNIIIVIDE 301
Query: 143 VHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVP 202
VHTL+GAGAAEGA+DAANILKP+LARGELQCIGATT+DEYR+HIEKDPALERRFQPV V
Sbjct: 302 VHTLVGAGAAEGALDAANILKPALARGELQCIGATTIDEYRQHIEKDPALERRFQPVWVN 361
Query: 203 EPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGS 262
EPS++ETI ILKGLR RYE HH+L T+EAL +AA L QYI+DRFLPDKAIDLIDE +
Sbjct: 362 EPSIEETITILKGLRLRYEQHHRLEITNEALTAAANLGAQYIADRFLPDKAIDLIDEGSA 421
Query: 263 RVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKG 322
RVRL + +LPE L+KELR I K+ AVR Q FE A E+RD E++L+AQ+ A++
Sbjct: 422 RVRLVNYRLPEAVHILDKELRTILDNKDLAVREQRFETATEIRDDELNLRAQMGAIIKAQ 481
Query: 323 KEM-SKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQ 381
K + K E VG DI IV+ WTG+PV K++ DE+ RLL++E LH+RVIGQ
Sbjct: 482 KRIVPKGVLERLKVGA----QDIASIVALWTGVPVTKITKDENTRLLELENVLHQRVIGQ 537
Query: 382 DEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLD 441
EAV A++RA+RRARVG++N RPIASF FSGPTGVGK+EL K LA+++FG+E++M+RLD
Sbjct: 538 KEAVSAVARAVRRARVGMRNMKRPIASFFFSGPTGVGKTELTKTLASFFFGAEDSMVRLD 597
Query: 442 MSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQI 501
MSEFMERHTV+KLIGSPPGY+GY EGGQLTEAVRR+PYTVVLFDE+EKAHPDVFN++LQI
Sbjct: 598 MSEFMERHTVAKLIGSPPGYIGYNEGGQLTEAVRRKPYTVVLFDEVEKAHPDVFNLLLQI 657
Query: 502 LEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVI---EKGGRRIGFDLDY-DEKDSSYNRIK 557
LEDGRLTDSKGR +DFKNT+LIMTSN+GS I E + IGF + D K + Y ++
Sbjct: 658 LEDGRLTDSKGRVIDFKNTILIMTSNLGSKAIQNNELASQGIGFGGETGDTKKTKYAQLC 717
Query: 558 SLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKT-KDIELQVTE 616
+ V E LK +F+PEFLNR+DE+IVF QLTK +K+IA IM+K++ +R+K K+I L +T
Sbjct: 718 NTVGESLKAFFKPEFLNRIDEIIVFEQLTKNNIKQIAVIMVKDLIERVKKEKEISLSLTP 777
Query: 617 RFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKML----AREIKEGDSVIVDVDSD 670
R E ++EEG+NP+YGARPLRRA+++L+ED ++ + L + + ++VDVD D
Sbjct: 778 RMMELLIEEGFNPTYGARPLRRALVKLVEDKVSLEYLRYKKDHDDDDPVDILVDVDFD 835
>gi|410658561|ref|YP_006910932.1| ATP-dependent Clp protease, ATP-binding subunit ClpC / Negative
regulator of genetic competence clcC/mecB [Dehalobacter
sp. DCA]
gi|410661548|ref|YP_006913919.1| ATP-dependent Clp protease, ATP-binding subunit ClpC / Negative
regulator of genetic competence clcC/mecB [Dehalobacter
sp. CF]
gi|409020916|gb|AFV02947.1| ATP-dependent Clp protease, ATP-binding subunit ClpC / Negative
regulator of genetic competence clcC/mecB [Dehalobacter
sp. DCA]
gi|409023904|gb|AFV05934.1| ATP-dependent Clp protease, ATP-binding subunit ClpC / Negative
regulator of genetic competence clcC/mecB [Dehalobacter
sp. CF]
Length = 827
Score = 805 bits (2078), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/684 (59%), Positives = 530/684 (77%), Gaps = 20/684 (2%)
Query: 1 MVGESTEAVGAGVGGGSSGNK--------MPTLEEYGTNLTKLAEEGKLDPVVGRQPQIE 52
++G TE G + G S+ N PTL E+G +LT +A EGKLDPVVGR +IE
Sbjct: 140 LLGGETE--GTSMPGSSAANNSKPGQAGGTPTLNEFGRDLTVMAAEGKLDPVVGRGNEIE 197
Query: 53 RVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAG 112
RV+Q+L RRTKNNP LIGEPGVGKTAIAEGLAQRI + VP+ + K+V+TLD+ +VAG
Sbjct: 198 RVIQVLSRRTKNNPVLIGEPGVGKTAIAEGLAQRIVNNQVPEILVDKRVVTLDLSSMVAG 257
Query: 113 TKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQ 172
TKYRGEFEER+KK+MEEI+ + +++FIDE+HTLIGAGAAEGAIDAANILKP+LARGE+Q
Sbjct: 258 TKYRGEFEERMKKVMEEIRLAGNVVVFIDELHTLIGAGAAEGAIDAANILKPALARGEMQ 317
Query: 173 CIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEA 232
CIGATTLDEYRKHIE+DPALERRFQP+KV EP+V+ET+ ILKGLR++YE HH+++ +DEA
Sbjct: 318 CIGATTLDEYRKHIERDPALERRFQPIKVGEPTVEETVAILKGLRDKYEAHHRVKISDEA 377
Query: 233 LVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEA 292
+ AA+LS +YISDRFLPDKAIDLIDEA SRVR+ P + +ELE+E+ + KEK A
Sbjct: 378 IDVAARLSDRYISDRFLPDKAIDLIDEAASRVRIHSFTAPSDLKELEEEIENLKKEKEAA 437
Query: 293 VRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWT 352
V+ Q+FEKA E+RD E + ++S + K E S+ E + VGP DI IVS+WT
Sbjct: 438 VKRQEFEKAAEIRDEEQKKREKLSE-IRKNWEESR-EKDRMVVGP----EDISGIVSSWT 491
Query: 353 GIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFS 412
G+PV K+ ES RLLK+E LH+ VIGQDEAV A++R+IRRAR GLK+P RPI SFIF
Sbjct: 492 GVPVNKLEEGESFRLLKLESLLHESVIGQDEAVTAVARSIRRARAGLKDPKRPIGSFIFL 551
Query: 413 GPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTE 472
GPTGVGK++LA++LA FG E ++IR+DMSE+ME+H VS+++GSPPGYVG+ EGGQLTE
Sbjct: 552 GPTGVGKTQLARSLAESLFGDENSLIRVDMSEYMEKHAVSRMVGSPPGYVGHDEGGQLTE 611
Query: 473 AVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSV 532
AVRR+PY+V+LFDEIEKAHP+VFN++LQ+LEDGRLTDSKGR VDF+N +LIMTSNVG+S
Sbjct: 612 AVRRKPYSVILFDEIEKAHPEVFNILLQVLEDGRLTDSKGRLVDFRNCVLIMTSNVGASF 671
Query: 533 IEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKE 592
++K +GF + ++S Y + S + EELK+ FRPEFLNR+DEM+VF L + ++ +
Sbjct: 672 LKK--ESLGF-VSGRSEESEYKSMSSRIMEELKKTFRPEFLNRVDEMVVFHPLKQDDLVK 728
Query: 593 IADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKM 652
I I++K+V RLK +++EL + + E + EEG +P+YGARPLRRAI +++ED ++EK+
Sbjct: 729 ITKILIKDVSKRLKEQELELVLDDEVLEHLAEEGNDPTYGARPLRRAIQKMIEDPLSEKI 788
Query: 653 LAREIKEGDSVIVDVDSDGNVTVL 676
L GD++ V++ SD V +
Sbjct: 789 LEGTYNAGDTIKVEL-SDKEVVFV 811
>gi|302390927|ref|YP_003826747.1| ATPase AAA [Acetohalobium arabaticum DSM 5501]
gi|302203004|gb|ADL11682.1| ATPase AAA-2 domain protein [Acetohalobium arabaticum DSM 5501]
Length = 813
Score = 805 bits (2078), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/662 (59%), Positives = 525/662 (79%), Gaps = 7/662 (1%)
Query: 15 GGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGV 74
G + PTL+++ +LT LAEE KLDPV+GR+ +I+RV+Q+L RR KNNPCLIGEPGV
Sbjct: 157 GRKRNSNTPTLDDFSRDLTALAEEEKLDPVIGRKQEIQRVIQVLSRRKKNNPCLIGEPGV 216
Query: 75 GKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSD 134
GKTAIAEGLA IA+ DVP+T+ K+V+ LD+ LVAG+KYRGEFE+RLK +M EI ++
Sbjct: 217 GKTAIAEGLALMIANDDVPETLTDKRVLALDLSSLVAGSKYRGEFEKRLKAVMNEINEAG 276
Query: 135 EIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALER 194
+II+FIDE+H L+GAG AEGAIDAANILKP+LARGELQCIGATTLDEYRKHIEKD ALER
Sbjct: 277 DIIIFIDELHNLVGAGGAEGAIDAANILKPALARGELQCIGATTLDEYRKHIEKDSALER 336
Query: 195 RFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAI 254
RFQ V V EPS++ET+ IL+GLR+ YE HH+++ TDEA+ +AA LS++YI+DRFLPDKAI
Sbjct: 337 RFQSVLVEEPSIEETVSILEGLRDVYEAHHRVKITDEAIKAAANLSHRYITDRFLPDKAI 396
Query: 255 DLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQ 314
DL+DEAGS++RL+ +P E +EL KEL + KEK AV+ Q+FEKA LRD+E LK +
Sbjct: 397 DLVDEAGSKIRLQDNTVPSEIKELNKELESVEKEKEAAVKAQEFEKAANLRDKEKQLKEE 456
Query: 315 ISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETL 374
+ S+ + + G ++T+ DI IVS W+G+PV K++ DES +LL++EE L
Sbjct: 457 LEET------KSEWKNQKGRDESLITKEDIAEIVSDWSGVPVTKLTEDESKKLLRLEEEL 510
Query: 375 HKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSE 434
H+R++GQDEA++A+S+A+RRAR GLK+P RPI SFIF GPTGVGK+ELAK LA F E
Sbjct: 511 HERIVGQDEAIEAVSQAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELAKTLAEAMFDDE 570
Query: 435 EAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDV 494
EAMIR+DMSE+ME+H VS+L+G+PPGYVG+ EGGQLTE VRR+P++V+L DEIEKAHP+V
Sbjct: 571 EAMIRIDMSEYMEKHAVSRLVGAPPGYVGHEEGGQLTEQVRRQPFSVILLDEIEKAHPEV 630
Query: 495 FNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYN 554
FNM+LQ+LEDG+LTDS+GRTVDFKNT++IMTSNVG+++IE +GF ++SY
Sbjct: 631 FNMLLQVLEDGQLTDSQGRTVDFKNTIIIMTSNVGANLIENQS-GVGFTPSEKNAETSYQ 689
Query: 555 RIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQV 614
R+K VT ELK+ FRPEFLNRLDE IVF L +KEI D+ML+EVF+RL K+I ++V
Sbjct: 690 RMKEKVTSELKKQFRPEFLNRLDETIVFHALELEHIKEIIDLMLEEVFERLDEKEITIEV 749
Query: 615 TERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVT 674
T+ +E + E+G++ +GARPL+R I R++E+ ++EK++A E +GD ++VDVD + N+T
Sbjct: 750 TDDAKEVIAEKGFDKEFGARPLKRTIRRMMENPLSEKLIAGEFSDGDHIVVDVDEEENLT 809
Query: 675 VL 676
+
Sbjct: 810 FI 811
>gi|308071007|ref|YP_003872612.1| Negative regulator of genetic competence clpC/mecB [Paenibacillus
polymyxa E681]
gi|305860286|gb|ADM72074.1| Negative regulator of genetic competence clpC/mecB [Paenibacillus
polymyxa E681]
Length = 814
Score = 805 bits (2078), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 394/671 (58%), Positives = 519/671 (77%), Gaps = 10/671 (1%)
Query: 5 STEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKN 64
S+EAV + G + PTL+ +LT A+E LDPV+GR +IERV+Q+L RRTKN
Sbjct: 144 SSEAVSSH-HGAPANVSTPTLDSLARDLTASAKENNLDPVIGRSKEIERVIQVLSRRTKN 202
Query: 65 NPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLK 124
NP LIGEPGVGKTAIAEGLAQ+I + ++P+T+ K+V+TLDMG +VAGTKYRGEFE+RLK
Sbjct: 203 NPVLIGEPGVGKTAIAEGLAQKIIANEIPETLRDKRVMTLDMGSVVAGTKYRGEFEDRLK 262
Query: 125 KLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRK 184
K+M+EI+Q+ I+LFIDE+HTLIGAG AEGAIDA+NILKP+LARGELQCIGATTLDEYRK
Sbjct: 263 KIMDEIRQAGNIVLFIDELHTLIGAGGAEGAIDASNILKPALARGELQCIGATTLDEYRK 322
Query: 185 HIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYI 244
+IEKD ALERRFQP+ V +PS +E IQIL GLR+RYE HH+++ TDEA+ +A +LS +YI
Sbjct: 323 YIEKDAALERRFQPITVDQPSPEEAIQILYGLRDRYEAHHRVKITDEAIEAAVKLSDRYI 382
Query: 245 SDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGEL 304
+DRFLPDKAIDLIDEAGS+VRL +P ++LE L I KEK+ AV+ Q+FEKA L
Sbjct: 383 TDRFLPDKAIDLIDEAGSKVRLNSYTVPPNLKQLENRLEDIRKEKDSAVQSQEFEKAAAL 442
Query: 305 RDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDES 364
RD E ++ ++ ++ KE + G VT DI +V+ WTG+PV K+ +E+
Sbjct: 443 RDTEQKIREELDVTKNQWKE------QQGRTDSEVTPEDIAQVVAIWTGVPVSKLKEEET 496
Query: 365 DRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAK 424
RLL MEE LH+RVIGQDEAVKA+SRAIRRAR GLK+P RP+ SFIF GPTGVGK+ELA+
Sbjct: 497 HRLLNMEELLHERVIGQDEAVKAVSRAIRRARAGLKDPKRPMGSFIFLGPTGVGKTELAR 556
Query: 425 ALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLF 484
ALA FG E A+IR+DMSE+ME+H+ S+L+G+PPGYVGY EGGQLTE VRR+PY+VVL
Sbjct: 557 ALAESMFGDENAVIRIDMSEYMEKHSTSRLVGAPPGYVGYEEGGQLTEKVRRKPYSVVLL 616
Query: 485 DEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDL 544
DEIEKAHP+VFN++LQ+LEDGRLTDSKGR VDF+NTL+I+TSNVG+ I++ +GF
Sbjct: 617 DEIEKAHPEVFNILLQVLEDGRLTDSKGRVVDFRNTLIILTSNVGAQAIKRNS-TLGFTA 675
Query: 545 DYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDR 604
D + Y+ +K V +ELK+ FRPEFLNR+DE+IVF L + + EI +M +E+ R
Sbjct: 676 VVD-AGADYDNMKGKVMDELKKSFRPEFLNRIDEIIVFHSLEEKHIAEIVSLMSEELRKR 734
Query: 605 LKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVI 664
L +++ ++T+ ++ + +EG++P+YGARPLRRAI + +ED ++E++L I +GDS+
Sbjct: 735 LNEYEVDFELTDNAKKFLAKEGFDPAYGARPLRRAIQKHIEDRLSEELLTGNITKGDSLF 794
Query: 665 VDVDSDGNVTV 675
+D + +G +TV
Sbjct: 795 ID-EENGALTV 804
>gi|390456410|ref|ZP_10241938.1| ATPase AAA [Paenibacillus peoriae KCTC 3763]
Length = 814
Score = 804 bits (2077), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/662 (59%), Positives = 515/662 (77%), Gaps = 9/662 (1%)
Query: 5 STEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKN 64
S+EAV + G + PTL+ +LT A+E LDPV+GR +IERV+Q+L RRTKN
Sbjct: 144 SSEAVSSH-HGAPANVSTPTLDSLARDLTASAKENNLDPVIGRSKEIERVIQVLSRRTKN 202
Query: 65 NPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLK 124
NP LIGEPGVGKTAIAEGLAQ+I + ++P+T+ K+V+TLDMG +VAGTKYRGEFE+RLK
Sbjct: 203 NPVLIGEPGVGKTAIAEGLAQKIIANEIPETLRDKRVMTLDMGSVVAGTKYRGEFEDRLK 262
Query: 125 KLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRK 184
K+M+EI+Q+ I+LFIDE+HTLIGAG AEGAIDA+NILKP+LARGELQCIGATTLDEYRK
Sbjct: 263 KIMDEIRQAGNIVLFIDELHTLIGAGGAEGAIDASNILKPALARGELQCIGATTLDEYRK 322
Query: 185 HIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYI 244
+IEKD ALERRFQP+ V +PS +E IQIL GLR+RYE HH+++ TDEA+ +A +LS +YI
Sbjct: 323 YIEKDAALERRFQPITVDQPSPEEAIQILYGLRDRYEAHHRVKITDEAIEAAVKLSDRYI 382
Query: 245 SDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGEL 304
+DRFLPDKAIDLIDEAGS+VRL +P ++LE L I KEK+ AV+ Q+FEKA L
Sbjct: 383 TDRFLPDKAIDLIDEAGSKVRLNSYTVPPNLKQLENRLEDIRKEKDSAVQSQEFEKAAAL 442
Query: 305 RDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDES 364
RD E ++ ++ ++ KE + G VT DI +V+ WTG+PV K+ +E+
Sbjct: 443 RDTEQKIREELDVTKNQWKE------QQGRTDSEVTPEDIAQVVAIWTGVPVSKLKEEET 496
Query: 365 DRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAK 424
RLL ME+ LH+RVIGQDEAVKA+SRAIRRAR GLK+P RPI SFIF GPTGVGK+ELA+
Sbjct: 497 HRLLNMEQLLHERVIGQDEAVKAVSRAIRRARAGLKDPKRPIGSFIFLGPTGVGKTELAR 556
Query: 425 ALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLF 484
ALA FG E A+IR+DMSE+ME+H+ S+L+G+PPGYVGY EGGQLTE VRR+PY+VVL
Sbjct: 557 ALAESMFGDENAVIRIDMSEYMEKHSTSRLVGAPPGYVGYEEGGQLTEKVRRKPYSVVLL 616
Query: 485 DEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDL 544
DEIEKAHP+VFN++LQ+LEDGRLTDSKGR VDF+NTL+I+TSNVG+ I++ +GF
Sbjct: 617 DEIEKAHPEVFNILLQVLEDGRLTDSKGRVVDFRNTLIILTSNVGAQAIKRNS-TLGFTA 675
Query: 545 DYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDR 604
D + Y+ +K V +ELK+ FRPEFLNR+DE+IVF L + + EI +M +E+ R
Sbjct: 676 VVD-AGADYDNMKGKVMDELKKSFRPEFLNRIDEIIVFHSLEEKHIAEIVSLMSEELRKR 734
Query: 605 LKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVI 664
L +++ ++T++ + + +EG++P+YGARPLRRAI + +ED ++E++L+ I +GDS++
Sbjct: 735 LNEYEVDFELTDKAKTFLAKEGFDPAYGARPLRRAIQKHIEDRLSEELLSGNISKGDSLL 794
Query: 665 VD 666
+D
Sbjct: 795 ID 796
>gi|429194529|ref|ZP_19186617.1| negative regulator of genetic competence ClpC/MecB [Streptomyces
ipomoeae 91-03]
gi|428669694|gb|EKX68629.1| negative regulator of genetic competence ClpC/MecB [Streptomyces
ipomoeae 91-03]
Length = 841
Score = 804 bits (2076), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/687 (58%), Positives = 531/687 (77%), Gaps = 16/687 (2%)
Query: 11 AGVGGGSSGNKMPTL--EEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCL 68
A GG + G +L +++G NLT+ A E KLDPV+GR+ +IERV+Q+L RRTKNNP L
Sbjct: 151 ATAGGPAEGTPSTSLVLDQFGRNLTQAARESKLDPVIGREKEIERVMQVLSRRTKNNPVL 210
Query: 69 IGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLME 128
IGEPGVGKTA+ EGLAQ I G+VP+T++ K + TLD+G LVAG++YRG+FEERLKK+++
Sbjct: 211 IGEPGVGKTAVVEGLAQAIVKGEVPETLKDKHLYTLDLGALVAGSRYRGDFEERLKKVLK 270
Query: 129 EIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEK 188
EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEYRKH+EK
Sbjct: 271 EIRTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIGATTLDEYRKHLEK 330
Query: 189 DPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRF 248
D ALERRFQP++V EPS+ TI+ILKGLR+RYE HH++ TDEALV AA L+ +YISDRF
Sbjct: 331 DAALERRFQPIQVAEPSLPHTIEILKGLRDRYEAHHRVSITDEALVQAATLADRYISDRF 390
Query: 249 LPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDRE 308
LPDKAIDLIDEAGSR+R+R P + RE ++++ + ++K A+ QDFEKA LRD+E
Sbjct: 391 LPDKAIDLIDEAGSRMRIRRMTAPPDLREFDEKIAGVRRDKESAIDSQDFEKAASLRDKE 450
Query: 309 MDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKVSTDESD 365
L A K + E +AGD+ VV EVD I +++ TGIPV K++ +ES
Sbjct: 451 KQLLA--------AKAKREKEWKAGDM-DVVAEVDGELIAEVLATATGIPVFKLTEEESS 501
Query: 366 RLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKA 425
RLL+ME+ LHKRVIGQD+AVKA+S+AIRR R GLK+P RP SFIF+GP+GVGK+EL+KA
Sbjct: 502 RLLRMEDELHKRVIGQDDAVKALSKAIRRTRAGLKDPKRPGGSFIFAGPSGVGKTELSKA 561
Query: 426 LAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFD 485
LA + FG E+A+I LDMSEF E+HTVS+L GSPPGYVGY EGGQLTE VRR+P++VVLFD
Sbjct: 562 LAEFLFGDEDALISLDMSEFSEKHTVSRLFGSPPGYVGYEEGGQLTEKVRRKPFSVVLFD 621
Query: 486 EIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLD 545
E+EKAHPD+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N+G+ I K G +GF
Sbjct: 622 EVEKAHPDIFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNLGTRDISK-GFNLGFAAS 680
Query: 546 YDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRL 605
D K ++Y R+K+ V++ELKQ+FRPEFLNR+D+++VF QLT+ ++ I D+M+ +V +RL
Sbjct: 681 GDTK-TNYERMKNKVSDELKQHFRPEFLNRVDDVVVFPQLTQADILRIVDLMIGKVDERL 739
Query: 606 KTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIV 665
K +D+ +++++ +E + ++GY+P GARPLRR I R +EDS++EK+L E++ G V+V
Sbjct: 740 KDRDMGIELSQSAKELLSKKGYDPVLGARPLRRTIQREIEDSLSEKILFGELRPGHIVVV 799
Query: 666 DVDSDGNVTVLNGSSGAPESLADPLPV 692
D + DG+ +L D P+
Sbjct: 800 DTEGDGDAATFTFRGEEKSALPDVPPI 826
>gi|403669832|ref|ZP_10935008.1| negative regulator of genetic competence clpC/mecB [Kurthia sp.
JC8E]
Length = 817
Score = 803 bits (2075), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/676 (59%), Positives = 522/676 (77%), Gaps = 11/676 (1%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
++G G G + PTL+ +LT++A EG LDPV+GR +I RV+++L R
Sbjct: 142 LLGSHDTNAGTGGANATQTASTPTLDSLARDLTQIAREGSLDPVIGRSKEITRVIEVLSR 201
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNP LIGEPGVGKTAIAEGLAQ+I +VP+T+ GK+V+TLDMG +VAGTKYRGEFE
Sbjct: 202 RTKNNPVLIGEPGVGKTAIAEGLAQQIIHNEVPETLRGKRVMTLDMGTVVAGTKYRGEFE 261
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
+RLKK+M+EI+Q+ +ILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTLD
Sbjct: 262 DRLKKVMDEIRQAGNVILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLD 321
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRK+IEKD ALERRFQP++V EPS +E IQI++GLR+RYE HH+++ TDEA+ +A LS
Sbjct: 322 EYRKYIEKDAALERRFQPIQVDEPSPEEAIQIIRGLRDRYEAHHRVKITDEAVEAAVTLS 381
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
+YISDRFLPDKAIDL+DEAGS+VRLR P +ELE++L QI EKN AV+GQ+FEK
Sbjct: 382 NRYISDRFLPDKAIDLMDEAGSKVRLRSYTTPPNLKELEQKLEQIKAEKNSAVQGQEFEK 441
Query: 301 AGELRDREMDLKAQISALVDKGKE-MSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 359
A LRD E LK ++ A + KE +AE++ VT DI +V+ WTGIPV K+
Sbjct: 442 AAGLRDTEQKLKDELDATKKEWKEKQGRAESK-------VTVNDIAEVVAMWTGIPVAKI 494
Query: 360 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 419
+ +ES++LL +EE LHKRV+GQ AV+AISRAIRRAR GLK+P RPI SFIF GPTGVGK
Sbjct: 495 AQEESEKLLNLEEELHKRVVGQGAAVEAISRAIRRARAGLKDPKRPIGSFIFLGPTGVGK 554
Query: 420 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 479
+EL +ALA FG E+AMIR+DMSE+ME+H+ S+L+GSPPGYVGY EGGQLTE VRR+PY
Sbjct: 555 TELGRALAEVMFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPY 614
Query: 480 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 539
+VVL DEIEKAHPDVFN++LQ+L+DGRLTDSKGR VDF+NT++IMTSN+G+ + K +
Sbjct: 615 SVVLLDEIEKAHPDVFNILLQVLDDGRLTDSKGRVVDFRNTVVIMTSNIGAEAL-KYRKS 673
Query: 540 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 599
+GF K + + K ++ EELK+ FRPEFLNR+DE IVF+ L K E+ EI M +
Sbjct: 674 VGFGAQETAKAAETS--KDVMLEELKKAFRPEFLNRIDETIVFQSLKKEELVEIVSKMSE 731
Query: 600 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 659
++ RL + IEL++T +++ EEGY+P YGARP+RRA+ + +ED ++E++L E+
Sbjct: 732 QLTKRLAEQKIELELTPAALDKIAEEGYDPEYGARPIRRALQKHVEDRLSEEILKGEVLT 791
Query: 660 GDSVIVDVDSDGNVTV 675
G+ V+ DVD+DG V
Sbjct: 792 GNVVVFDVDADGKFIV 807
>gi|310644235|ref|YP_003948994.1| ATPase AAA [Paenibacillus polymyxa SC2]
gi|309249186|gb|ADO58753.1| ATPase AAA-2 domain-containing protein [Paenibacillus polymyxa SC2]
gi|392304928|emb|CCI71291.1| ATP-dependent Clp protease ATP-binding subunit clpC [Paenibacillus
polymyxa M1]
Length = 814
Score = 803 bits (2075), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/671 (58%), Positives = 519/671 (77%), Gaps = 10/671 (1%)
Query: 5 STEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKN 64
S+EAV + G + PTL+ +LT A+E LDPV+GR +IERV+Q+L RRTKN
Sbjct: 144 SSEAVSSH-HGAPANVSTPTLDSLARDLTASAKENNLDPVIGRSKEIERVIQVLSRRTKN 202
Query: 65 NPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLK 124
NP LIGEPGVGKTAIAEGLAQ+I + ++P+T+ K+V+TLDMG +VAGTKYRGEFE+RLK
Sbjct: 203 NPVLIGEPGVGKTAIAEGLAQKIIANEIPETLRDKRVMTLDMGSVVAGTKYRGEFEDRLK 262
Query: 125 KLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRK 184
K+M+EI+Q+ I+LFIDE+HTLIGAG AEGAIDA+NILKP+LARGELQCIGATTLDEYRK
Sbjct: 263 KIMDEIRQAGNIVLFIDELHTLIGAGGAEGAIDASNILKPALARGELQCIGATTLDEYRK 322
Query: 185 HIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYI 244
+IEKD ALERRFQP+ V +PS +E IQIL GLR+RYE HH+++ TDEA+ +A +LS +YI
Sbjct: 323 YIEKDAALERRFQPITVDQPSPEEAIQILYGLRDRYEAHHRVKITDEAIEAAVRLSDRYI 382
Query: 245 SDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGEL 304
+DRFLPDKAIDLIDEAGS+VRL +P ++LE L I KEK+ AV+ Q+FEKA L
Sbjct: 383 TDRFLPDKAIDLIDEAGSKVRLNSYTVPPNLKQLENRLEDIRKEKDSAVQSQEFEKAAAL 442
Query: 305 RDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDES 364
RD E ++ ++ ++ KE + G VT DI +V+ WTG+PV K+ +E+
Sbjct: 443 RDTEQKIREELDVTKNQWKE------QQGRTDSEVTPEDIAQVVAIWTGVPVSKLKEEET 496
Query: 365 DRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAK 424
RLL ME+ LH+RVIGQ+EAVKA+SRAIRRAR GLK+P RPI SFIF GPTGVGK+ELA+
Sbjct: 497 HRLLNMEQLLHERVIGQEEAVKAVSRAIRRARAGLKDPKRPIGSFIFLGPTGVGKTELAR 556
Query: 425 ALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLF 484
ALA FG E A+IR+DMSE+ME+H+ S+L+G+PPGYVGY EGGQLTE VRR+PY+VVL
Sbjct: 557 ALAESMFGDENAVIRIDMSEYMEKHSTSRLVGAPPGYVGYEEGGQLTEKVRRKPYSVVLL 616
Query: 485 DEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDL 544
DEIEKAHP+VFN++LQ+LEDGRLTDSKGR VDF+NTL+I+TSNVG+ I++ +GF
Sbjct: 617 DEIEKAHPEVFNILLQVLEDGRLTDSKGRVVDFRNTLIILTSNVGAQAIKRNS-TLGFTA 675
Query: 545 DYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDR 604
D + Y+ +K V +ELK+ FRPEFLNR+DE+IVF L + + EI +M +E+ R
Sbjct: 676 VVD-AGADYDNMKGKVMDELKKSFRPEFLNRIDEIIVFHSLEEKHIAEIVSLMSEELRKR 734
Query: 605 LKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVI 664
L +++ ++T++ + + +EG++P+YGARPLRRAI + +ED ++E++L I +GDS+
Sbjct: 735 LNEYEVDFELTDKAKNFLAKEGFDPAYGARPLRRAIQKHIEDRLSEELLTGNISKGDSLY 794
Query: 665 VDVDSDGNVTV 675
+D + +G +TV
Sbjct: 795 ID-EENGALTV 804
>gi|376403710|ref|YP_005090071.1| clpC gene product (chloroplast) [Fucus vesiculosus]
gi|269991273|emb|CAX12451.1| ATP-dependent clp protease ATP-binding subunit [Fucus vesiculosus]
Length = 891
Score = 803 bits (2074), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/637 (64%), Positives = 510/637 (80%), Gaps = 10/637 (1%)
Query: 23 PTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEG 82
P L EY T+LT+ AE KLDPVVGRQ +IERV+QIL RR KNNP LIGEPGVGKTA+AEG
Sbjct: 181 PNLLEYTTDLTEAAERAKLDPVVGRQNEIERVIQILSRRRKNNPILIGEPGVGKTAVAEG 240
Query: 83 LAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDE 142
LAQRI +VP + KV LD+ LL+AGTKYRGEFEERLK++++E+K+ I++ IDE
Sbjct: 241 LAQRIIQREVPSELHDYKVFVLDVTLLLAGTKYRGEFEERLKRIVQELKEQKNIVIVIDE 300
Query: 143 VHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVP 202
VHTL+GAGAAEGA+DAANILKP+LARGELQCIGATT+DEYR+HIEKDPALERRFQPV V
Sbjct: 301 VHTLVGAGAAEGALDAANILKPALARGELQCIGATTIDEYRQHIEKDPALERRFQPVWVN 360
Query: 203 EPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGS 262
EPS++ETI ILKGLR RYE HH+L T+EAL++AA L QYI+DRFLPDKAIDLIDE +
Sbjct: 361 EPSIEETITILKGLRLRYEQHHRLEITNEALIAAANLGAQYIADRFLPDKAIDLIDEGSA 420
Query: 263 RVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKG 322
RVRL + +LPE A L+KELR I +K+ AVR Q FEKA E+RD E++L+AQ+ A++
Sbjct: 421 RVRLVNYRLPEAAYILDKELRNILDDKDLAVREQRFEKATEIRDDELNLRAQMGAIIKAQ 480
Query: 323 KEM-SKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQ 381
K M K E VG DI IV+ WTG+PV K++ DE+ RLL++E LH RVIG
Sbjct: 481 KRMVPKGVLERLKVGA----QDIASIVALWTGVPVTKITKDENTRLLELENVLHTRVIGX 536
Query: 382 DEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLD 441
EAV A++RA+RRARVG++N RPI+SF FSGPTGVGK+EL K LA+++FG+E++M+RLD
Sbjct: 537 KEAVSAVARAVRRARVGMRNMKRPISSFFFSGPTGVGKTELTKTLASFFFGAEDSMVRLD 596
Query: 442 MSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQI 501
MSEFMERHTV+KLIGSPPGY+GY EGGQLTEAVRR+PYTVVLFDE+EKAHPDVFN++LQI
Sbjct: 597 MSEFMERHTVAKLIGSPPGYIGYNEGGQLTEAVRRKPYTVVLFDEVEKAHPDVFNLLLQI 656
Query: 502 LEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEK---GGRRIGFDLD-YDEKDSSYNRIK 557
LEDGRLTDS+GR +DFKNT+LIMTSN+GS I+ + IGF + D K + Y ++
Sbjct: 657 LEDGRLTDSQGRLIDFKNTILIMTSNLGSKAIQNNDANSQGIGFGGEASDTKKTKYAQLC 716
Query: 558 SLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKT-KDIELQVTE 616
+ V E LK +F+PEFLNR+DE+IVF QLTK +KEIA IM+ ++ +R+K K+I L +T
Sbjct: 717 NTVGESLKAFFKPEFLNRIDEIIVFEQLTKNNIKEIAVIMINDLVERVKNEKNISLSLTP 776
Query: 617 RFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKML 653
R E ++EEG+NP+YGARPLRRAI++L+ED ++ + L
Sbjct: 777 RMMELLIEEGFNPTYGARPLRRAIVKLVEDKVSLEYL 813
>gi|375310836|ref|ZP_09776101.1| ATPase aaa-2 domain-containing protein [Paenibacillus sp. Aloe-11]
gi|375077204|gb|EHS55447.1| ATPase aaa-2 domain-containing protein [Paenibacillus sp. Aloe-11]
Length = 814
Score = 803 bits (2074), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/671 (58%), Positives = 519/671 (77%), Gaps = 10/671 (1%)
Query: 5 STEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKN 64
S+EAV + G + PTL+ +LT A+E LDPV+GR +IERV+Q+L RRTKN
Sbjct: 144 SSEAVSSH-HGAPANVSTPTLDSLARDLTASAKENNLDPVIGRSKEIERVIQVLSRRTKN 202
Query: 65 NPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLK 124
NP LIGEPGVGKTAIAEGLAQ+I + ++P+T+ K+V+TLDMG +VAGTKYRGEFE+RLK
Sbjct: 203 NPVLIGEPGVGKTAIAEGLAQKIIANEIPETLRDKRVMTLDMGSVVAGTKYRGEFEDRLK 262
Query: 125 KLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRK 184
K+M+EI+Q+ I+LFIDE+HTLIGAG AEGAIDA+NILKP+LARGELQCIGATTLDEYRK
Sbjct: 263 KIMDEIRQAGNIVLFIDELHTLIGAGGAEGAIDASNILKPALARGELQCIGATTLDEYRK 322
Query: 185 HIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYI 244
+IEKD ALERRFQP+ V +PS +E IQIL GLR+RYE HH+++ TDEA+ +A +LS +YI
Sbjct: 323 YIEKDAALERRFQPITVDQPSPEEAIQILYGLRDRYEAHHRVKITDEAIEAAVKLSDRYI 382
Query: 245 SDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGEL 304
+DRFLPDKAIDLIDEAGS+VRL +P ++LE L I KEK+ AV+ Q+FEKA L
Sbjct: 383 TDRFLPDKAIDLIDEAGSKVRLNSYTVPPNLKQLENRLEDIRKEKDSAVQSQEFEKAAAL 442
Query: 305 RDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDES 364
RD E ++ ++ ++ KE + G VT DI +V+ WTG+PV K+ +E+
Sbjct: 443 RDTEQKIREELDVTKNQWKE------QQGRTDSEVTPEDIAQVVAIWTGVPVSKLKEEET 496
Query: 365 DRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAK 424
RLL ME+ LH+RVIGQ+EAVKA+SRAIRRAR GLK+P RPI SFIF GPTGVGK+ELA+
Sbjct: 497 HRLLNMEQLLHERVIGQEEAVKAVSRAIRRARAGLKDPKRPIGSFIFLGPTGVGKTELAR 556
Query: 425 ALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLF 484
ALA FG E A+IR+DMSE+ME+H+ S+L+G+PPGYVGY EGGQLTE VRR+PY+VVL
Sbjct: 557 ALAESMFGDENAVIRIDMSEYMEKHSTSRLVGAPPGYVGYEEGGQLTEKVRRKPYSVVLL 616
Query: 485 DEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDL 544
DEIEKAHP+VFN++LQ+LEDGRLTDSKGR VDF+NTL+I+TSNVG+ I++ +GF
Sbjct: 617 DEIEKAHPEVFNILLQVLEDGRLTDSKGRVVDFRNTLIILTSNVGAQAIKRNS-TLGFTA 675
Query: 545 DYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDR 604
D + Y+ +K V +ELK+ FRPEFLNR+DE+IVF L + + EI +M +E+ R
Sbjct: 676 VVD-AGADYDNMKGKVMDELKKSFRPEFLNRIDEIIVFHSLEEKHIAEIVSLMSEELRKR 734
Query: 605 LKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVI 664
L +++ +T++ + + +EG++P+YGARPLRRAI + +ED ++E++L I +GDS++
Sbjct: 735 LNEYEVDFDLTDKAKTFLAKEGFDPAYGARPLRRAIQKHIEDRLSEELLTGNIAKGDSLL 794
Query: 665 VDVDSDGNVTV 675
+D + +G +TV
Sbjct: 795 ID-EENGALTV 804
>gi|421076461|ref|ZP_15537448.1| ATPase AAA-2 domain protein [Pelosinus fermentans JBW45]
gi|392525472|gb|EIW48611.1| ATPase AAA-2 domain protein [Pelosinus fermentans JBW45]
Length = 812
Score = 803 bits (2074), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/654 (61%), Positives = 519/654 (79%), Gaps = 8/654 (1%)
Query: 23 PTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEG 82
PTLEE+G +L KLA EGK+DPV+GR +IERV+QIL RRTKNNP LIGEPGVGKTAIAEG
Sbjct: 165 PTLEEFGRDLNKLAREGKIDPVIGRGAEIERVLQILSRRTKNNPVLIGEPGVGKTAIAEG 224
Query: 83 LAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDE 142
LAQRI +VPD + K++I+L+M LVAG+KYRG+FEERLKK++EE++Q +ILFIDE
Sbjct: 225 LAQRIVQNNVPDILGVKRIISLNMASLVAGSKYRGDFEERLKKVLEEVRQDGNVILFIDE 284
Query: 143 VHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVP 202
+HTLIGAGAAEGAIDAANILKP+LARGE+Q IGATTL+EY+K+IEKD ALERRFQP+ V
Sbjct: 285 LHTLIGAGAAEGAIDAANILKPALARGEIQVIGATTLNEYKKYIEKDAALERRFQPITVS 344
Query: 203 EPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGS 262
EPSV++ I IL+G+R++YE H++ TDEA+ +A LS++YISDRFLPDKAIDL+DEA +
Sbjct: 345 EPSVEDAITILQGVRDKYEAFHRISITDEAIEAAVTLSHRYISDRFLPDKAIDLMDEAAA 404
Query: 263 RVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKG 322
RVRL+ P +ELEK L+Q+ EK A+ Q++E+A LRD E LK ++ + K
Sbjct: 405 RVRLKTFSSPSNVKELEKTLKQLQTEKEAAIAAQEYEQAAHLRDEEKRLKNELES---KQ 461
Query: 323 KEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQD 382
KE + G+ VVT +I HIV+ WTGIPVEK++ +E+ RLL +EE LHKRVIGQ+
Sbjct: 462 KEWK----QQGNEQLVVTGEEIAHIVAVWTGIPVEKLAQEEAVRLLNLEEELHKRVIGQN 517
Query: 383 EAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDM 442
EAVK+++RA+RRAR GLK+P RPI SFIF GPTGVGK+ELAKALAA F E +MIRLDM
Sbjct: 518 EAVKSVARAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELAKALAATLFNDESSMIRLDM 577
Query: 443 SEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQIL 502
SE+ME+HTVS+LIG+PPGYVGY EGGQLT+AVRR+PY V+L DEIEKAH DVFN++LQ+L
Sbjct: 578 SEYMEKHTVSRLIGAPPGYVGYDEGGQLTDAVRRKPYAVILLDEIEKAHYDVFNILLQVL 637
Query: 503 EDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTE 562
EDGRLTDS+GR VDFKNT++IMTSNVG+ + + +GF D D+ ++ K+ V E
Sbjct: 638 EDGRLTDSQGRKVDFKNTVIIMTSNVGAKHLRRDNTMLGFLAD-DKMNNEAENAKNRVME 696
Query: 563 ELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERV 622
E+K+ FRPEF+NR+DEMIVF LT E+ I DIMLK+V RL+ + L+ +++ + +
Sbjct: 697 EVKRTFRPEFINRVDEMIVFGSLTDTELTSIVDIMLKDVGKRLEDNTLYLECSDKAKAEL 756
Query: 623 VEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTVL 676
V+EG + +YGARPLRRAI +L+ED +AE ML ++ +GD+V++DVD+DG V ++
Sbjct: 757 VKEGRDYAYGARPLRRAIQKLVEDEIAELMLRHQVIKGDTVLIDVDADGKVKLM 810
>gi|392959702|ref|ZP_10325183.1| ATPase AAA-2 domain protein [Pelosinus fermentans DSM 17108]
gi|421056369|ref|ZP_15519287.1| ATPase AAA-2 domain protein [Pelosinus fermentans B4]
gi|421058700|ref|ZP_15521366.1| ATPase AAA-2 domain protein [Pelosinus fermentans B3]
gi|421065887|ref|ZP_15527574.1| ATPase AAA-2 domain protein [Pelosinus fermentans A12]
gi|421070056|ref|ZP_15531193.1| ATPase AAA-2 domain protein [Pelosinus fermentans A11]
gi|392438207|gb|EIW16065.1| ATPase AAA-2 domain protein [Pelosinus fermentans B4]
gi|392448794|gb|EIW25971.1| ATPase AAA-2 domain protein [Pelosinus fermentans A11]
gi|392456086|gb|EIW32845.1| ATPase AAA-2 domain protein [Pelosinus fermentans DSM 17108]
gi|392457903|gb|EIW34503.1| ATPase AAA-2 domain protein [Pelosinus fermentans A12]
gi|392460300|gb|EIW36618.1| ATPase AAA-2 domain protein [Pelosinus fermentans B3]
Length = 813
Score = 803 bits (2074), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/654 (61%), Positives = 519/654 (79%), Gaps = 8/654 (1%)
Query: 23 PTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEG 82
PTLEE+G +L KLA EGK+DPV+GR +IERV+QIL RRTKNNP LIGEPGVGKTAIAEG
Sbjct: 166 PTLEEFGRDLNKLAREGKIDPVIGRGAEIERVLQILSRRTKNNPVLIGEPGVGKTAIAEG 225
Query: 83 LAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDE 142
LAQRI +VPD + K++I+L+M LVAG+KYRG+FEERLKK++EE++Q +ILFIDE
Sbjct: 226 LAQRIVQNNVPDILGVKRIISLNMASLVAGSKYRGDFEERLKKVLEEVRQDGNVILFIDE 285
Query: 143 VHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVP 202
+HTLIGAGAAEGAIDAANILKP+LARGE+Q IGATTL+EY+K+IEKD ALERRFQP+ V
Sbjct: 286 LHTLIGAGAAEGAIDAANILKPALARGEIQVIGATTLNEYKKYIEKDAALERRFQPITVS 345
Query: 203 EPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGS 262
EPSV++ I IL+G+R++YE H++ TDEA+ +A LS++YISDRFLPDKAIDL+DEA +
Sbjct: 346 EPSVEDAITILQGVRDKYEAFHRISITDEAIEAAVTLSHRYISDRFLPDKAIDLMDEAAA 405
Query: 263 RVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKG 322
RVRL+ P +ELEK L+Q+ EK A+ Q++E+A LRD E LK ++ + K
Sbjct: 406 RVRLKTFSSPSNVKELEKTLKQLQTEKEAAIAAQEYEQAAHLRDEEKRLKNELES---KQ 462
Query: 323 KEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQD 382
KE + G+ VVT +I HIV+ WTGIPVEK++ +E+ RLL +EE LHKRVIGQ+
Sbjct: 463 KEWK----QQGNEQLVVTGEEIAHIVAVWTGIPVEKLAQEEAVRLLNLEEELHKRVIGQN 518
Query: 383 EAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDM 442
EAVK+++RA+RRAR GLK+P RPI SFIF GPTGVGK+ELAKALAA F E +MIRLDM
Sbjct: 519 EAVKSVARAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELAKALAATLFNDESSMIRLDM 578
Query: 443 SEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQIL 502
SE+ME+HTVS+LIG+PPGYVGY EGGQLT+AVRR+PY V+L DEIEKAH DVFN++LQ+L
Sbjct: 579 SEYMEKHTVSRLIGAPPGYVGYDEGGQLTDAVRRKPYAVILLDEIEKAHYDVFNILLQVL 638
Query: 503 EDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTE 562
EDGRLTDS+GR VDFKNT++IMTSNVG+ + + +GF D D+ ++ K+ V E
Sbjct: 639 EDGRLTDSQGRKVDFKNTVIIMTSNVGAKHLRRDNTMLGFLAD-DKMNNEAENAKNRVME 697
Query: 563 ELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERV 622
E+K+ FRPEF+NR+DEMIVF LT E+ I DIMLK+V RL+ + L+ +++ + +
Sbjct: 698 EVKRTFRPEFINRVDEMIVFGSLTDTELTSIVDIMLKDVGKRLEDNTLYLECSDKAKAEL 757
Query: 623 VEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTVL 676
V+EG + +YGARPLRRAI +L+ED +AE ML ++ +GD+V++DVD+DG V ++
Sbjct: 758 VKEGRDYAYGARPLRRAIQKLVEDEIAELMLRHQVIKGDTVLIDVDADGKVKLM 811
>gi|425469734|ref|ZP_18848646.1| ATP-dependent Clp protease ATP-binding subunit clpA homolog
[Microcystis aeruginosa PCC 9701]
gi|389880387|emb|CCI38853.1| ATP-dependent Clp protease ATP-binding subunit clpA homolog
[Microcystis aeruginosa PCC 9701]
Length = 795
Score = 803 bits (2074), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/651 (60%), Positives = 500/651 (76%), Gaps = 45/651 (6%)
Query: 25 LEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLA 84
L +YG NL++ + GK+DPV+GR+P+IERVVQILGRRTK+NP L+GEPGVGKTAIAEGLA
Sbjct: 169 LAQYGRNLSQEVKNGKIDPVIGREPEIERVVQILGRRTKSNPILLGEPGVGKTAIAEGLA 228
Query: 85 QRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVH 144
QRI +GD+P+ ++ K+VI LDMG L+AGT++RG+FEERLK ++EE+++S IILFIDE+H
Sbjct: 229 QRIHNGDIPELLQDKQVIALDMGSLLAGTRFRGDFEERLKGVVEEVRKSGSIILFIDEIH 288
Query: 145 TLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEP 204
TL+GAG+ GA+DA+N+LKP+LARGELQC+GATTLDEY++HIE+D ALERRFQPV V EP
Sbjct: 289 TLVGAGSMGGAMDASNLLKPALARGELQCLGATTLDEYKQHIERDAALERRFQPVMVGEP 348
Query: 205 SVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRV 264
+ ++ I+IL+GL+ YE H+++Y +A+ +A LS +YI+DRFLPDKAIDL+DEAGSR
Sbjct: 349 TKEQAIEILRGLKATYEDFHQVKYDQKAIEAAVNLSSRYINDRFLPDKAIDLLDEAGSRT 408
Query: 265 RLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKE 324
LR++ + E+ +E I E +L+
Sbjct: 409 HLRYSLQSKSPAEVSEESPLINPE----------------------------SLI----- 435
Query: 325 MSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEA 384
PVV +I IV+AWTGIPV +++ ES+ LL +E LH+R+IGQ EA
Sbjct: 436 ------------PVVDAEEIAQIVAAWTGIPVTQLTETESESLLNLECQLHERIIGQQEA 483
Query: 385 VKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSE 444
V A+SRAIRRARV LKNPNRPIASFIF+GPTGVGK+EL KALA FGSE +MIRLDMSE
Sbjct: 484 VNAVSRAIRRARVNLKNPNRPIASFIFAGPTGVGKTELTKALAKLLFGSESSMIRLDMSE 543
Query: 445 FMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILED 504
FME HTVSKLIG+PPGY+GY EGGQLTEAVRR+PY VVLFDEIEKAHPDVFN++LQ+LED
Sbjct: 544 FMESHTVSKLIGAPPGYIGYNEGGQLTEAVRRQPYRVVLFDEIEKAHPDVFNLLLQLLED 603
Query: 505 GRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEEL 564
G LTDS+GR VDFKNTL+IMTSN+GS VIEKGG +GF++ D S Y +I + VTEEL
Sbjct: 604 GHLTDSQGRRVDFKNTLIIMTSNIGSKVIEKGGNSLGFEIADDFAQSRYQQISNRVTEEL 663
Query: 565 KQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVE 624
KQYFRPEFLNRLDE+IVFRQLT+ EV +IADI++ ++ +L K I ++VT F++ V+
Sbjct: 664 KQYFRPEFLNRLDEIIVFRQLTREEVTQIADILIADLAKQLTEKGISVEVTAAFKDLVIN 723
Query: 625 EGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTV 675
EGY+PSYGARPLRRA+ R LEDS+AE ML+ ++ GD ++DV ++ VTV
Sbjct: 724 EGYDPSYGARPLRRALTRRLEDSLAEAMLSGKVNSGDHALLDVTAEAVVTV 774
>gi|418577091|ref|ZP_13141221.1| putative stress response-related Clp ATPase [Staphylococcus
saprophyticus subsp. saprophyticus KACC 16562]
gi|379324453|gb|EHY91601.1| putative stress response-related Clp ATPase [Staphylococcus
saprophyticus subsp. saprophyticus KACC 16562]
Length = 820
Score = 803 bits (2073), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/653 (59%), Positives = 511/653 (78%), Gaps = 9/653 (1%)
Query: 16 GSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVG 75
+ N PTL+ +LT +A++G LDPV+GR +I RV+++L RRTKNNP LIGEPGVG
Sbjct: 154 ANKSNNTPTLDSLARDLTVIAKDGTLDPVIGRDKEITRVIEVLSRRTKNNPVLIGEPGVG 213
Query: 76 KTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDE 135
KTAIAEGLA I + +VP+T++GK+V++LDMG +VAGTKYRGEFEERLKK+MEEI Q+
Sbjct: 214 KTAIAEGLALAIVNNEVPETLKGKRVMSLDMGTVVAGTKYRGEFEERLKKVMEEIHQAGN 273
Query: 136 IILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERR 195
+ILFIDE+HTL+GAG AEGAIDA+NILKP+LARGELQCIGATTLDEYR +IEKD ALERR
Sbjct: 274 VILFIDELHTLVGAGGAEGAIDASNILKPALARGELQCIGATTLDEYRNNIEKDAALERR 333
Query: 196 FQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAID 255
FQPV+V EP+V++TI+ILKGLR+RYE HH++ +DEALVSAA+LS++Y+SDRFLPDKAID
Sbjct: 334 FQPVQVDEPTVEDTIEILKGLRDRYEAHHRINISDEALVSAAKLSHRYVSDRFLPDKAID 393
Query: 256 LIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQI 315
LIDEA S+VRL+ P +E+E+++ Q+ EK+ AV Q+FE A LRD++ L+ Q
Sbjct: 394 LIDEASSKVRLKSHTTPPNLKEIEQQIEQVKNEKDAAVHAQEFENAANLRDKQTKLEKQY 453
Query: 316 SALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLH 375
K T+ GD ++E DI +++ WTGIP+ K++ ESDRLL +E+TLH
Sbjct: 454 EEANTNWK-----NTQNGD-NTSLSEEDIGEVIAGWTGIPLTKINETESDRLLNLEDTLH 507
Query: 376 KRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEE 435
RVIGQ +AV +IS+A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+ALA FG ++
Sbjct: 508 NRVIGQKDAVTSISKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGEDD 567
Query: 436 AMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVF 495
AMIR+DMSEFME+H VS+L+G+PPGYVG+ +GGQLTE VRR+PY+V+LFDEIEKAHPDVF
Sbjct: 568 AMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKVRRKPYSVILFDEIEKAHPDVF 627
Query: 496 NMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNR 555
N++LQ+L+DG LTD+KGR VDF+NT++IMTSNVG+ ++ R GF + +D Y
Sbjct: 628 NILLQVLDDGHLTDTKGRRVDFRNTVIIMTSNVGAQELQD-QRFAGFGGATEGQD--YES 684
Query: 556 IKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVT 615
I+ + +ELK FRPEFLNR+D++IVF +L+K E+K+I +M+ ++ +RL +DI + VT
Sbjct: 685 IRKTMMKELKNAFRPEFLNRVDDIIVFHKLSKDELKQIVTMMVNKLTNRLSEQDINISVT 744
Query: 616 ERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVD 668
E +E++ EEGY+P YGARPL RAI + +ED+++E +L EG V +D D
Sbjct: 745 EAAKEKIAEEGYDPEYGARPLIRAIQKTVEDNLSELILDGNQIEGKEVKIDHD 797
>gi|315649734|ref|ZP_07902818.1| ATPase AAA-2 domain protein [Paenibacillus vortex V453]
gi|315274922|gb|EFU38298.1| ATPase AAA-2 domain protein [Paenibacillus vortex V453]
Length = 818
Score = 802 bits (2072), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/671 (59%), Positives = 517/671 (77%), Gaps = 10/671 (1%)
Query: 5 STEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKN 64
S+EAV + G PTL+ +LT +A+EG LDPV+GR +IERV+Q+L RRTKN
Sbjct: 144 SSEAVSSH-HGTPQNVSTPTLDSLARDLTAIAKEGNLDPVIGRSKEIERVIQVLSRRTKN 202
Query: 65 NPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLK 124
NP LIGEPGVGKTAIAEGLAQRI + ++P+T+ K+V+TLDMG +VAGTKYRGEFE+RLK
Sbjct: 203 NPVLIGEPGVGKTAIAEGLAQRIINNEIPETLRDKRVMTLDMGSVVAGTKYRGEFEDRLK 262
Query: 125 KLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRK 184
K+M+EI+Q+ I+LFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTLDEYRK
Sbjct: 263 KIMDEIRQAGNIVLFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEYRK 322
Query: 185 HIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYI 244
+IEKD ALERRFQP+ V +PS +E IQIL GLR+RYE HH+++ TDEA+ A +LS +YI
Sbjct: 323 YIEKDAALERRFQPITVDQPSPEEAIQILYGLRDRYEAHHRVKITDEAIEQAVKLSDRYI 382
Query: 245 SDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGEL 304
+DRFLPDKAIDLIDEAGS+VRL +P ++ E L I KEK+ AV+ Q+FEKA L
Sbjct: 383 TDRFLPDKAIDLIDEAGSKVRLHTYTIPPNLKDQEAHLEDIRKEKDAAVQSQEFEKAAAL 442
Query: 305 RDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDES 364
RD E L+ ++ ++ KE + G VT DI +V+ WTGIPV K+ +E+
Sbjct: 443 RDTEQKLREELEITKNQWKE------KQGRTDSEVTPEDIADVVANWTGIPVNKLKEEET 496
Query: 365 DRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAK 424
+RLL +EE LH RVIGQ+EAVKA+SRA+RRAR GLK+P RP+ SFIF GPTGVGK+ELA+
Sbjct: 497 ERLLNLEEILHSRVIGQEEAVKAVSRAVRRARAGLKDPKRPMGSFIFLGPTGVGKTELAR 556
Query: 425 ALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLF 484
ALA FG E A++R+DMSE+ME+H+ S+L+G+PPGYVGY EGGQLTE VRR+PY+VVL
Sbjct: 557 ALAEAMFGDENAVVRIDMSEYMEKHSTSRLVGAPPGYVGYEEGGQLTEKVRRKPYSVVLL 616
Query: 485 DEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDL 544
DEIEKAHP+VFN++LQ+LEDGRLTDSKGR VDF+NTL+I+TSNVG+ I+K +GF
Sbjct: 617 DEIEKAHPEVFNILLQVLEDGRLTDSKGRVVDFRNTLIILTSNVGAEAIKKNS-TLGFTA 675
Query: 545 DYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDR 604
D YN +K V +ELK+ FRPEFLNR+DE+IVF L + + EI +M E+ R
Sbjct: 676 VSD-SGRDYNNMKGKVMDELKKSFRPEFLNRIDEIIVFHSLEEKHIAEIVTLMSDELRKR 734
Query: 605 LKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVI 664
L +++ ++T++ + + +EGY+P++GARPLRRAI + +ED ++E++L I +GDS+I
Sbjct: 735 LLEFEVQFELTDKAKTFIAKEGYDPAFGARPLRRAIQKHIEDRLSEELLRGNITKGDSLI 794
Query: 665 VDVDSDGNVTV 675
+D +++G + V
Sbjct: 795 ID-EANGELVV 804
>gi|390442268|ref|ZP_10230280.1| ATP-dependent Clp protease ATP-binding subunit clpA homolog
[Microcystis sp. T1-4]
gi|389834447|emb|CCI34406.1| ATP-dependent Clp protease ATP-binding subunit clpA homolog
[Microcystis sp. T1-4]
Length = 795
Score = 802 bits (2072), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/651 (60%), Positives = 499/651 (76%), Gaps = 45/651 (6%)
Query: 25 LEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLA 84
L +YG NL++ + GK+DPV+GR+P+IERVVQILGRRTK+NP L+G PGVGKTAIAEGLA
Sbjct: 169 LAQYGRNLSQEVKNGKIDPVIGREPEIERVVQILGRRTKSNPILLGAPGVGKTAIAEGLA 228
Query: 85 QRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVH 144
QRI SGD+P+ ++ K+VI LDMG L+AGT++RG+FEERLK ++EE+++S IILFIDE+H
Sbjct: 229 QRIHSGDIPELLQDKQVIALDMGSLLAGTRFRGDFEERLKGVVEEVRKSGSIILFIDEIH 288
Query: 145 TLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEP 204
TL+GAG+ GA+DA+N+LKP+LARGELQC+GATTLDEY++HIE+D ALERRFQPV V EP
Sbjct: 289 TLVGAGSMGGAMDASNLLKPALARGELQCLGATTLDEYKQHIERDAALERRFQPVMVGEP 348
Query: 205 SVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRV 264
+ ++ I+IL+GL+ YE H+++Y +A+ +A LS +YI+DRFLPDKAIDL+DEAGSR
Sbjct: 349 TKEQAIEILRGLKATYEDFHQVKYDQKAIEAAVNLSSRYINDRFLPDKAIDLLDEAGSRT 408
Query: 265 RLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKE 324
LR++ + E+ +E I E +L+
Sbjct: 409 HLRYSLQSKSPAEVNEESPLINPE----------------------------SLI----- 435
Query: 325 MSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEA 384
PVV +I IV+AWTGIPV +++ ES+ LL +E LH+R+IGQ EA
Sbjct: 436 ------------PVVDAEEIAQIVAAWTGIPVTQLTETESESLLNLECQLHERIIGQQEA 483
Query: 385 VKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSE 444
V A+SRAIRRARV LKNPNRPIASFIF+GPTGVGK+EL KALA FGSE +MIRLDMSE
Sbjct: 484 VNAVSRAIRRARVNLKNPNRPIASFIFAGPTGVGKTELTKALAKLLFGSESSMIRLDMSE 543
Query: 445 FMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILED 504
FME HTVSKLIG+PPGY+GY EGGQLTEAVRR+PY VVLFDEIEKAHPDVFN++LQ+LED
Sbjct: 544 FMESHTVSKLIGAPPGYIGYNEGGQLTEAVRRQPYRVVLFDEIEKAHPDVFNLLLQLLED 603
Query: 505 GRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEEL 564
G LTDS+GR VDFKNTL+IMTSN+GS VIEKGG+ +GF++ D S Y +I + VTEEL
Sbjct: 604 GHLTDSQGRRVDFKNTLIIMTSNIGSKVIEKGGKSLGFEIADDFAQSRYQQISNRVTEEL 663
Query: 565 KQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVE 624
KQYFRPEFLNRLDE+IVFRQLT+ EV +IADI++ ++ +L K I +QVT F++ V+
Sbjct: 664 KQYFRPEFLNRLDEIIVFRQLTREEVTQIADILIADLAKQLTEKGISVQVTAAFKDLVIN 723
Query: 625 EGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTV 675
EGY+PSYGARPLRRA+ R LEDS+A ML+ ++ GD I+DV ++ VTV
Sbjct: 724 EGYDPSYGARPLRRALTRRLEDSLAVAMLSGKVNSGDHAILDVTAEAVVTV 774
>gi|422302574|ref|ZP_16389935.1| ATP-dependent Clp protease ATP-binding subunit clpA homolog
[Microcystis aeruginosa PCC 9806]
gi|389788171|emb|CCI16339.1| ATP-dependent Clp protease ATP-binding subunit clpA homolog
[Microcystis aeruginosa PCC 9806]
Length = 795
Score = 802 bits (2072), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/651 (60%), Positives = 499/651 (76%), Gaps = 45/651 (6%)
Query: 25 LEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLA 84
L +YG NL++ + GK+DPV+GR+P+IERVVQILGRRTK+NP L+GEPGVGKTAIAEGLA
Sbjct: 169 LAQYGRNLSQEVKNGKIDPVIGREPEIERVVQILGRRTKSNPILLGEPGVGKTAIAEGLA 228
Query: 85 QRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVH 144
QRI +GD+P+ ++ K+VI LDMG L+AGT++RG+FEERLK ++EE+++S IILFIDE+H
Sbjct: 229 QRIHNGDIPELLQDKQVIALDMGSLLAGTRFRGDFEERLKGVVEEVRKSGSIILFIDEIH 288
Query: 145 TLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEP 204
TL+GAG+ GA+DA+N+LKP+LARGELQC+GATTLDEY++HIE+D ALERRFQPV V EP
Sbjct: 289 TLVGAGSMGGAMDASNLLKPALARGELQCLGATTLDEYKRHIERDAALERRFQPVMVGEP 348
Query: 205 SVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRV 264
+ ++ I+IL+GL+ YE H+++Y +A+ +A LS +YI+DRFLPDKAIDL+DEAGSR
Sbjct: 349 TKEQAIEILQGLKATYEDFHQVKYDQKAIEAAVNLSSRYINDRFLPDKAIDLLDEAGSRT 408
Query: 265 RLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKE 324
LR++ E+ +E I E +L+
Sbjct: 409 HLRYSLQSTSPAEVNEESPLINPE----------------------------SLI----- 435
Query: 325 MSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEA 384
PVV +I IV+AWTGIPV +++ ES+ LL +E LH+R+IGQ EA
Sbjct: 436 ------------PVVDAEEIAQIVAAWTGIPVTQLTETESESLLNLECQLHERIIGQQEA 483
Query: 385 VKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSE 444
V A+SRAIRRARV LKNPNRPIASFIF+GPTGVGK+EL KALA FGSE +MIRLDMSE
Sbjct: 484 VNAVSRAIRRARVNLKNPNRPIASFIFAGPTGVGKTELTKALAKLLFGSESSMIRLDMSE 543
Query: 445 FMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILED 504
FME HTVSKLIG+PPGY+GY EGGQLTEAVRR+PY VVLFDEIEKAHPDVFN++LQ+LED
Sbjct: 544 FMESHTVSKLIGAPPGYIGYNEGGQLTEAVRRQPYRVVLFDEIEKAHPDVFNLLLQLLED 603
Query: 505 GRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEEL 564
G LTDS+GR VDFKNTL+IMTSN+GS VIEKGG +GF++ D S Y +I + VTEEL
Sbjct: 604 GHLTDSQGRRVDFKNTLIIMTSNIGSKVIEKGGNSLGFEMADDFAQSRYQQISNRVTEEL 663
Query: 565 KQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVE 624
KQYFRPEFLNRLDE+IVFRQLT+ EV +IADI++ ++ +L K I ++VT F++ V+
Sbjct: 664 KQYFRPEFLNRLDEIIVFRQLTREEVTQIADILIADLAKQLTEKGISVEVTAAFKDLVIN 723
Query: 625 EGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTV 675
EGY+PSYGARPLRRA+ R LEDS+AE ML+ ++ GD ++DV ++ VTV
Sbjct: 724 EGYDPSYGARPLRRALTRRLEDSLAEAMLSGKVNSGDHALLDVTAEAVVTV 774
>gi|379794996|ref|YP_005324994.1| ATP-dependent Clp protease ATP-binding subunit clpC [Staphylococcus
aureus subsp. aureus MSHR1132]
gi|356871986|emb|CCE58325.1| ATP-dependent Clp protease ATP-binding subunit clpC [Staphylococcus
aureus subsp. aureus MSHR1132]
Length = 818
Score = 802 bits (2072), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 383/653 (58%), Positives = 514/653 (78%), Gaps = 9/653 (1%)
Query: 16 GSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVG 75
+ N PTL+ +LT +A++G LDPV+GR +I RV+++L RRTKNNP LIGEPGVG
Sbjct: 154 ATKANNTPTLDSLARDLTVIAKDGTLDPVIGRDKEITRVIEVLSRRTKNNPVLIGEPGVG 213
Query: 76 KTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDE 135
KTAIAEGLAQ I + +VP+T++ K+V++LDMG +VAGTKYRGEFEERLKK+MEEI+Q+
Sbjct: 214 KTAIAEGLAQAIVNNEVPETLKDKRVMSLDMGTVVAGTKYRGEFEERLKKVMEEIQQAGN 273
Query: 136 IILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERR 195
+ILFIDE+HTL+GAG AEGAIDA+NILKP+LARGELQCIGATTLDEYRK+IEKD ALERR
Sbjct: 274 VILFIDELHTLVGAGGAEGAIDASNILKPALARGELQCIGATTLDEYRKNIEKDAALERR 333
Query: 196 FQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAID 255
FQPV+V EPSV +T+ ILKGLR+RYE HH++ +DEA+ +A +LS +Y+SDRFLPDKAID
Sbjct: 334 FQPVQVDEPSVVDTVAILKGLRDRYEAHHRINISDEAIEAAVKLSNRYVSDRFLPDKAID 393
Query: 256 LIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQI 315
LIDEA S+VRL+ P +E+E+E+ ++ EK+ AV Q+FE A LRD++ L+ Q
Sbjct: 394 LIDEASSKVRLKSHTTPNNLKEIEQEIEKVKNEKDAAVHAQEFENAANLRDKQTKLEKQY 453
Query: 316 SALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLH 375
++ K T+ G + ++E DI +++ WTGIP+ K++ ES++LL +E+TLH
Sbjct: 454 EEAKNEWK-----NTQNG-MSTSLSEEDIAEVIAGWTGIPLTKINETESEKLLSLEDTLH 507
Query: 376 KRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEE 435
+RVIGQ +AV +IS+A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+ALA FG ++
Sbjct: 508 ERVIGQKDAVNSISKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGDDD 567
Query: 436 AMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVF 495
AMIR+DMSEFME+H VS+L+G+PPGYVG+ +GGQLTE VRR+PY+V+LFDEIEKAHPDVF
Sbjct: 568 AMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKVRRKPYSVILFDEIEKAHPDVF 627
Query: 496 NMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNR 555
N++LQ+L+DG LTD+KGRTVDF+NT++IMTSNVG+ ++ R GF DE+D Y
Sbjct: 628 NILLQVLDDGHLTDTKGRTVDFRNTIIIMTSNVGAQELQD-QRFAGFGGSSDEQD--YET 684
Query: 556 IKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVT 615
I+ + +ELK FRPEFLNR+D++IVF +LTK E+KEI +M+ ++ +RL ++I + VT
Sbjct: 685 IRKTMLKELKNSFRPEFLNRVDDIIVFHKLTKEELKEIVTMMVNKLTNRLSEQNINIVVT 744
Query: 616 ERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVD 668
++ ++++ EEGY+P YGARPL RAI + +ED+++E +L EG V VD D
Sbjct: 745 DKAKDKIAEEGYDPEYGARPLIRAIQKTIEDNLSELILDGNKIEGKKVTVDHD 797
>gi|389573541|ref|ZP_10163615.1| negative regulator of genetic competence ClpC/mecB [Bacillus sp. M
2-6]
gi|388426856|gb|EIL84667.1| negative regulator of genetic competence ClpC/mecB [Bacillus sp. M
2-6]
Length = 811
Score = 802 bits (2072), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/666 (60%), Positives = 523/666 (78%), Gaps = 10/666 (1%)
Query: 10 GAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLI 69
GA G +S PTL+ +LT +A+E LDPV+GR +I+RV+++L RRTKNNP LI
Sbjct: 149 GASAAGSNSNANTPTLDSLARDLTAIAKEDSLDPVIGRSKEIQRVIEVLSRRTKNNPVLI 208
Query: 70 GEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEE 129
GEPGVGKTAIAEGLAQ+I +VP+ + K+V+TLDMG +VAGTKYRGEFE+RLKK+M+E
Sbjct: 209 GEPGVGKTAIAEGLAQQIIHNEVPEILRDKRVMTLDMGTVVAGTKYRGEFEDRLKKVMDE 268
Query: 130 IKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKD 189
I+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTLDEYRK+IEKD
Sbjct: 269 IRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEYRKYIEKD 328
Query: 190 PALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFL 249
ALERRFQP++V +PSVDE+IQIL+GLR+RYE HH++ TDEA+ +A +LS +YISDRFL
Sbjct: 329 AALERRFQPIQVDQPSVDESIQILRGLRDRYEAHHRVSITDEAIEAAVKLSDRYISDRFL 388
Query: 250 PDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREM 309
PDKAIDLIDEAGS+VRLR P +ELE++L ++ KEK+ AV+ Q+FEKA LRD E
Sbjct: 389 PDKAIDLIDEAGSKVRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFEKAASLRDTEQ 448
Query: 310 DLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLK 369
L+ ++ KE + G V+ DI +VS+WTG+PV K++ E+D+LL
Sbjct: 449 RLREKVEVTKKSWKE------KQGQENSEVSVDDIAMVVSSWTGVPVSKIAQTETDKLLN 502
Query: 370 MEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAY 429
ME+ LH RVIGQDEAV A+++A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+ALA
Sbjct: 503 MEQLLHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAES 562
Query: 430 YFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEK 489
FG EEAMIR+DMSE+ME+H+ S+L+GSPPGYVGY EGGQLTE VRR+PY+VVL DEIEK
Sbjct: 563 IFGDEEAMIRIDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPYSVVLLDEIEK 622
Query: 490 AHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEK 549
AHPDVFN++LQ+LEDGRLTDSKGRTVDF+NT+LIMTSNVG+S +++ + +GF++ ++
Sbjct: 623 AHPDVFNILLQVLEDGRLTDSKGRTVDFRNTILIMTSNVGASELKR-NKYVGFNV--QDE 679
Query: 550 DSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKD 609
+Y +K V ELK+ FRPEF+NR+DE+IVF L K +KEI +M ++ RLK +D
Sbjct: 680 SQNYKDMKGKVMGELKRAFRPEFINRIDEIIVFHSLEKKHLKEIVSLMSDQLTKRLKEQD 739
Query: 610 IELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDS 669
+ +++TE + ++ +EG + YGARPLRRAI + +ED ++E++L I++G +++DV+
Sbjct: 740 LSIELTEAAKAKIADEGVDLEYGARPLRRAIQKHVEDRLSEELLKGNIEKGQHIVLDVE- 798
Query: 670 DGNVTV 675
DG + V
Sbjct: 799 DGEIVV 804
>gi|374294995|ref|YP_005045186.1| chaperone ATPase [Clostridium clariflavum DSM 19732]
gi|359824489|gb|AEV67262.1| ATPase with chaperone activity, ATP-binding subunit [Clostridium
clariflavum DSM 19732]
Length = 810
Score = 802 bits (2071), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/650 (60%), Positives = 518/650 (79%), Gaps = 7/650 (1%)
Query: 17 SSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGK 76
S+ + PTL ++G +LT++A E K DPV+GR +IERV+QIL RRTKNNPCLIGEPGVGK
Sbjct: 157 SASSNTPTLNQFGRDLTEMAREAKFDPVIGRDKEIERVIQILSRRTKNNPCLIGEPGVGK 216
Query: 77 TAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEI 136
TAIAEGLAQ+I G++P+ ++ K+V+TLD+ +VAG KYRGEFEERLKK +EEIK++ +
Sbjct: 217 TAIAEGLAQKIVEGNIPEILKDKRVVTLDLSSMVAGAKYRGEFEERLKKALEEIKKAGNV 276
Query: 137 ILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRF 196
ILFIDE+HT+IGAGAAEGAIDA+NILKPSLARGE+Q IGATTLDEYRKH+EKD ALERRF
Sbjct: 277 ILFIDEMHTIIGAGAAEGAIDASNILKPSLARGEIQVIGATTLDEYRKHVEKDAALERRF 336
Query: 197 QPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDL 256
QP+ V EP+V+E I+ILKG+R++YE HH+++ TDEALV+A +LS +YI+DRFLPDKAIDL
Sbjct: 337 QPIIVGEPTVEEAIEILKGIRDKYEAHHRVKITDEALVAAVKLSDRYITDRFLPDKAIDL 396
Query: 257 IDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQIS 316
IDEA S+VRLR P ++LE+++ ++ KEK +++ Q+FEKA +RD E LK ++
Sbjct: 397 IDEAASKVRLRSFTAPPNLKQLEEQVERLRKEKEDSIICQEFEKAARIRDEEQRLKNELE 456
Query: 317 ALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHK 376
+ ++ ++ T VTE ++ IV+ WTGIPV++++ +ES+RL+KMEE LH
Sbjct: 457 KAKNDWQQKNQTTTNT------VTEEEVAGIVADWTGIPVKRLAEEESERLMKMEEILHN 510
Query: 377 RVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEA 436
RVIGQ+EAVKA+S+AIRR RVGLK+P RP+ SFIF GPTGVGK+EL+KALA FG E A
Sbjct: 511 RVIGQEEAVKAVSKAIRRGRVGLKDPKRPVGSFIFLGPTGVGKTELSKALAEALFGDENA 570
Query: 437 MIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFN 496
+IR+DMSE+ME+H+VS+L+GSPPGYVGY EGGQLTE VRR+PY+VVLFDEIEKAHPDVFN
Sbjct: 571 IIRIDMSEYMEKHSVSRLVGSPPGYVGYEEGGQLTEKVRRKPYSVVLFDEIEKAHPDVFN 630
Query: 497 MMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRI 556
++LQILEDGRLTDS+GR VDFKNT++IMTSNVG+ +I + +R+GF +K +YN +
Sbjct: 631 LLLQILEDGRLTDSQGRVVDFKNTVIIMTSNVGARLITE-PKRLGFASANVDKAKNYNDM 689
Query: 557 KSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTE 616
K+ V ELK FRPEFLNR+DE+IVF L + +K I +M+ + RLK IEL+VTE
Sbjct: 690 KNNVMGELKNTFRPEFLNRVDEIIVFHPLEEEHLKRIVGLMIDNLAKRLKENAIELEVTE 749
Query: 617 RFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVD 666
+ + ++G++ YGARPLRRAI ++ED +AE+ML +K GD V+++
Sbjct: 750 DAKLLLAKKGFDQVYGARPLRRAIQSMVEDKLAEEMLEGRVKAGDKVVIE 799
>gi|402299365|ref|ZP_10818976.1| class III stress response-related ATPase [Bacillus alcalophilus
ATCC 27647]
gi|401725403|gb|EJS98688.1| class III stress response-related ATPase [Bacillus alcalophilus
ATCC 27647]
Length = 813
Score = 802 bits (2071), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/673 (58%), Positives = 522/673 (77%), Gaps = 20/673 (2%)
Query: 2 VGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRR 61
VG S++ GA +S PTL+ +LT +A E LDPV+GR +IERV+Q+L RR
Sbjct: 147 VGSSSQQSGA-----TSHASTPTLDSLARDLTAIAREEALDPVIGRSKEIERVIQVLSRR 201
Query: 62 TKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEE 121
TKNNP LIGEPGVGKTAIAEGLAQ I + +VP+T+ K+V+TLDMG +VAGTKYRGEFE+
Sbjct: 202 TKNNPVLIGEPGVGKTAIAEGLAQSIIANEVPETLRNKRVMTLDMGTVVAGTKYRGEFED 261
Query: 122 RLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDE 181
RLKK+M+EI+Q+ +ILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTLDE
Sbjct: 262 RLKKVMDEIRQAGNVILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDE 321
Query: 182 YRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSY 241
YRK+IEKD ALERRFQP++V EP+++E+IQIL GLR+RYE HH++ TD+A+ A +LS
Sbjct: 322 YRKYIEKDAALERRFQPIQVNEPTLEESIQILTGLRDRYEAHHRVTITDDAISEAVKLSD 381
Query: 242 QYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKA 301
+YI+DRFLPDKAIDLIDEA S+VRLR P +ELE+ L + KEK+ AV+ Q+FEKA
Sbjct: 382 RYITDRFLPDKAIDLIDEAASKVRLRSYTAPPNLKELEQRLEETRKEKDAAVQSQEFEKA 441
Query: 302 GELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEV---DIQHIVSAWTGIPVEK 358
LRD E L+ ++ + ++ K+ E TEV DI +V++WTG+PV K
Sbjct: 442 ASLRDSEQRLREEVDEMKNEWKKKQGQEN---------TEVVVDDIAQVVASWTGVPVSK 492
Query: 359 VSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVG 418
++ +E++RLL+MEE LH RV+GQ+EAV +IS+A+RRAR GLK+P RPI SFIF GPTGVG
Sbjct: 493 LAEEETERLLRMEEILHGRVVGQEEAVVSISKAVRRARAGLKDPKRPIGSFIFLGPTGVG 552
Query: 419 KSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRP 478
K+ELA+A+A FG E+++IR+DMSE+ME+H S+L+GSPPGYVG+ EGGQLTE VRR+P
Sbjct: 553 KTELARAVAETLFGDEDSVIRIDMSEYMEKHATSRLVGSPPGYVGHEEGGQLTEKVRRKP 612
Query: 479 YTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR 538
Y+V+L DEIEKAHP+VFN++LQ+LEDGRLTDSKGRTVDF+NT +IMTSNVG+S +++ +
Sbjct: 613 YSVILLDEIEKAHPEVFNILLQVLEDGRLTDSKGRTVDFRNTAIIMTSNVGASALKR-NK 671
Query: 539 RIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIML 598
+GF ++ + ++ Y +K V ELK+ FRPEFLNR+DE+IVF L K V+EI ++M
Sbjct: 672 YLGFAIESEGQE--YKDMKDKVMGELKRSFRPEFLNRIDEIIVFHSLEKKHVREITNLMA 729
Query: 599 KEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIK 658
+++ RL + IEL++TE+ +++ + GY+P YGARPLRRA+ + +ED ++E++L I
Sbjct: 730 EQLKKRLYEQGIELELTEKALDKITDIGYDPEYGARPLRRALQKQVEDRLSEELLKGTIS 789
Query: 659 EGDSVIVDVDSDG 671
+G ++DV D
Sbjct: 790 KGQKAVIDVKDDA 802
>gi|269128670|ref|YP_003302040.1| ATPase AAA-2 domain-containing protein [Thermomonospora curvata DSM
43183]
gi|268313628|gb|ACZ00003.1| ATPase AAA-2 domain protein [Thermomonospora curvata DSM 43183]
Length = 837
Score = 801 bits (2070), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 394/649 (60%), Positives = 519/649 (79%), Gaps = 12/649 (1%)
Query: 25 LEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLA 84
L+++G NLT+ A EGKLDPV+GR+ +IERV+Q+L RRTKNNP L+GEPGVGKTA+ EGLA
Sbjct: 167 LDQFGRNLTQAAREGKLDPVIGREKEIERVMQVLSRRTKNNPVLVGEPGVGKTAVVEGLA 226
Query: 85 QRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVH 144
Q+I G+VP+T++ K++ TLD+G LVAG++YRG+FEERLKK+++EI+ +IILFIDE+H
Sbjct: 227 QKIVKGEVPETLKDKQLYTLDLGALVAGSRYRGDFEERLKKVLKEIRTRGDIILFIDELH 286
Query: 145 TLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEP 204
TL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEYRKH+EKD ALERRFQP++V EP
Sbjct: 287 TLVGAGAAEGAIDAASILKPMLARGELQTIGATTLDEYRKHLEKDAALERRFQPIQVAEP 346
Query: 205 SVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRV 264
S+ TI+ILKGLR+RYE HH++ TD ALV+AAQL+ +YISDRFLPDKAIDLIDEAGSR+
Sbjct: 347 SLSHTIEILKGLRDRYEAHHRVSITDGALVAAAQLADRYISDRFLPDKAIDLIDEAGSRM 406
Query: 265 RLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKE 324
R+R P + RE ++++ Q+ +EK A+ QDFEKA LRD+E L A K
Sbjct: 407 RIRRMTAPPDLREYDEKIAQVRREKESAIDEQDFEKAAALRDKEKQLLA--------AKA 458
Query: 325 MSKAETEAGDVGPV--VTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQD 382
+ E +AGD+ V VTE I +++ TGIPV K++ +E+ RLL+MEE LHKRVIGQ+
Sbjct: 459 QREKEWKAGDMDVVAEVTEELIAEVLATATGIPVFKLTEEETSRLLRMEEELHKRVIGQE 518
Query: 383 EAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDM 442
+A+KA+S++IRR R GLK+P RP SFIF+GP+GVGK+EL+K LA + FG E+A+I+LDM
Sbjct: 519 DAIKALSQSIRRTRAGLKDPKRPGGSFIFAGPSGVGKTELSKTLAEFLFGDEDALIQLDM 578
Query: 443 SEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQIL 502
SEFME+HTVS+L GSPPGYVGY EGGQLTE VRR+P++VVLFDEIEKAHPD+FN +LQIL
Sbjct: 579 SEFMEKHTVSRLFGSPPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHPDIFNSLLQIL 638
Query: 503 EDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTE 562
EDGRLTD++GRTVDFKNT++IMT+N+G+ I K G+ +GF D+ Y R+K+ V E
Sbjct: 639 EDGRLTDAQGRTVDFKNTIIIMTTNLGTRDISK-GQSLGFARP-DDHVGDYERMKAKVQE 696
Query: 563 ELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERV 622
ELKQ+FRPEFLNR+D+++VF QLT E+ +I D+M+ V +RL+ +D+ +++ + ++ +
Sbjct: 697 ELKQHFRPEFLNRVDDIVVFHQLTPKEIIQIVDLMIARVDERLRDRDMGIELKQEAKQLL 756
Query: 623 VEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDG 671
E GY+P GARPLRR I R +EDS++EK+L E+K G V+V V+ G
Sbjct: 757 AERGYDPVLGARPLRRTIQREIEDSLSEKILYGELKPGQIVLVGVEGSG 805
>gi|52078581|ref|YP_077372.1| class III stress response-related ATPase [Bacillus licheniformis
DSM 13 = ATCC 14580]
gi|319649145|ref|ZP_08003353.1| genetic competence ClpC/mecB negative regulatory protein [Bacillus
sp. BT1B_CT2]
gi|404487450|ref|YP_006711556.1| ATP-dependent Clp protease ClpC [Bacillus licheniformis DSM 13 =
ATCC 14580]
gi|423680479|ref|ZP_17655318.1| class III stress response-related ATPase [Bacillus licheniformis
WX-02]
gi|52001792|gb|AAU21734.1| class III stress response-related ATPase [Bacillus licheniformis
DSM 13 = ATCC 14580]
gi|52346444|gb|AAU39078.1| ATP-dependent Clp protease ClpC [Bacillus licheniformis DSM 13 =
ATCC 14580]
gi|317388845|gb|EFV69664.1| genetic competence ClpC/mecB negative regulatory protein [Bacillus
sp. BT1B_CT2]
gi|383441585|gb|EID49294.1| class III stress response-related ATPase [Bacillus licheniformis
WX-02]
Length = 810
Score = 801 bits (2070), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/671 (60%), Positives = 525/671 (78%), Gaps = 11/671 (1%)
Query: 5 STEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKN 64
S E+ GA G SS N PTL+ +LT +A+E LDPV+GR +I+RV+++L RRTKN
Sbjct: 144 SNESGGAASGANSSAN-TPTLDSLARDLTAIAKEDSLDPVIGRSKEIQRVIEVLSRRTKN 202
Query: 65 NPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLK 124
NP LIGEPGVGKTAIAEGLAQ+I + +VP+ + K+V+TLDMG +VAGTKYRGEFE+RLK
Sbjct: 203 NPVLIGEPGVGKTAIAEGLAQQIINNEVPEILRDKRVMTLDMGTVVAGTKYRGEFEDRLK 262
Query: 125 KLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRK 184
K+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTLDEYRK
Sbjct: 263 KVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEYRK 322
Query: 185 HIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYI 244
+IEKD ALERRFQP++V +PS +E+IQILKGLR+RYE HH++ TDEA+ +A +LS +YI
Sbjct: 323 YIEKDAALERRFQPIQVDQPSPEESIQILKGLRDRYEAHHRVSITDEAIEAAVKLSDRYI 382
Query: 245 SDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGEL 304
SDRFLPDKAIDLIDEAGS+VRLR P +ELE++L ++ KEK+ AV+ Q+FEKA L
Sbjct: 383 SDRFLPDKAIDLIDEAGSKVRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFEKAASL 442
Query: 305 RDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDES 364
RD E L+ Q+ KE + G VT DI +VS+WTG+PV K++ E+
Sbjct: 443 RDTEQRLREQVEETKKTWKE------KQGQENSEVTVDDIAMVVSSWTGVPVSKIAQTET 496
Query: 365 DRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAK 424
D+LL ME LH RVIGQDEAV A+++A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+
Sbjct: 497 DKLLNMESILHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELAR 556
Query: 425 ALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLF 484
ALA FG EEAMIR+DMSE+ME+H+ S+L+GSPPGYVGY EGGQLTE VRR+PY+VVL
Sbjct: 557 ALAESIFGDEEAMIRIDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPYSVVLL 616
Query: 485 DEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDL 544
DEIEKAHPDVFN++LQ+LEDGRLTDSKGRTVDF+NT+LIMTSNVG+S + + + +GF++
Sbjct: 617 DEIEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTILIMTSNVGASELRR-NKYVGFNV 675
Query: 545 DYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDR 604
++ +Y +K V ELK+ FRPEF+NR+DE+IVF L K +K+I +M ++ R
Sbjct: 676 --QDETQNYKDMKDKVMGELKRAFRPEFINRIDEIIVFHSLEKKHLKDIVSLMSDQLTKR 733
Query: 605 LKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVI 664
LK +D+ +++TE +E++ +EG + YGARPLRRAI + +ED ++E++L I++G ++
Sbjct: 734 LKEQDLSIELTEAAKEKIADEGVDLEYGARPLRRAIQKHVEDRLSEELLKGHIQKGQHIV 793
Query: 665 VDVDSDGNVTV 675
+DV+ DG V
Sbjct: 794 LDVE-DGEFVV 803
>gi|386841647|ref|YP_006246705.1| Clp-family ATP-binding protease [Streptomyces hygroscopicus subsp.
jinggangensis 5008]
gi|374101948|gb|AEY90832.1| Clp-family ATP-binding protease [Streptomyces hygroscopicus subsp.
jinggangensis 5008]
gi|451794942|gb|AGF64991.1| Clp-family ATP-binding protease [Streptomyces hygroscopicus subsp.
jinggangensis TL01]
Length = 840
Score = 801 bits (2069), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/693 (58%), Positives = 534/693 (77%), Gaps = 16/693 (2%)
Query: 3 GESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRT 62
G+ T A G G S + + L+++G NLT+ A E KLDPV+GR+ +IERV+Q+L RRT
Sbjct: 147 GKETAAAGGPAEGTPSTSLV--LDQFGRNLTQAARESKLDPVIGREKEIERVMQVLSRRT 204
Query: 63 KNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEER 122
KNNP LIGEPGVGKTA+ EGLAQ I G+VP+T++ K + TLD+G LVAG++YRG+FEER
Sbjct: 205 KNNPVLIGEPGVGKTAVVEGLAQAIVKGEVPETLKDKHLYTLDLGALVAGSRYRGDFEER 264
Query: 123 LKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEY 182
LKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEY
Sbjct: 265 LKKVLKEIRTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIGATTLDEY 324
Query: 183 RKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQ 242
RKH+EKD ALERRFQP++V EPS+ TI+ILKGLR+RYE HH++ TDEALV AA L+ +
Sbjct: 325 RKHLEKDAALERRFQPIQVAEPSLPHTIEILKGLRDRYEAHHRVSITDEALVQAATLADR 384
Query: 243 YISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAG 302
YISDRFLPDKAIDLIDEAGSR+R+R P + RE ++++ + ++K A+ QDFEKA
Sbjct: 385 YISDRFLPDKAIDLIDEAGSRMRIRRMTAPPDLREFDEKIAAVRRDKESAIDSQDFEKAA 444
Query: 303 ELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKV 359
LRD+E L A K + E +AGD+ VV EVD I +++ TGIPV K+
Sbjct: 445 SLRDKEKQLLA--------AKAKREKEWKAGDMD-VVAEVDGELIAEVLATATGIPVFKL 495
Query: 360 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 419
+ +ES RLL+MEE LHKRVIGQ++AVKA+S+AIRR R GLK+P RP SFIF+GP+GVGK
Sbjct: 496 TEEESSRLLRMEEELHKRVIGQNDAVKALSKAIRRTRAGLKDPKRPGGSFIFAGPSGVGK 555
Query: 420 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 479
+EL+KALA + FG E+A+I LDMSEF E+HTVS+L GSPPGYVGY EGGQLTE VRR+P+
Sbjct: 556 TELSKALAEFLFGDEDALISLDMSEFSEKHTVSRLFGSPPGYVGYEEGGQLTEKVRRKPF 615
Query: 480 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 539
+VVLFDE+EKAHPD+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N+G+ I K G
Sbjct: 616 SVVLFDEVEKAHPDIFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNLGTRDISK-GFN 674
Query: 540 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 599
+GF D K ++Y R+K+ V++ELKQ+FRPEFLNR+D+++VF QLT+ ++ I D+M+
Sbjct: 675 LGFAAAGDTK-TNYERMKNKVSDELKQHFRPEFLNRVDDVVVFPQLTQEDILRIVDLMIS 733
Query: 600 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 659
+V +RLK +D+ +++++ +E + ++GY+P GARPLRR I R +ED+++EK+L E++
Sbjct: 734 KVDERLKDRDMGIELSQSAKELLSKKGYDPVLGARPLRRTIQREIEDTLSEKILFGELRP 793
Query: 660 GDSVIVDVDSDGNVTVLNGSSGAPESLADPLPV 692
G V+VD + +G+ +L D P+
Sbjct: 794 GHIVVVDTEGEGDAATFTFRGEEKSALPDVPPI 826
>gi|242372741|ref|ZP_04818315.1| ClpB ATPase [Staphylococcus epidermidis M23864:W1]
gi|242349514|gb|EES41115.1| ClpB ATPase [Staphylococcus epidermidis M23864:W1]
Length = 818
Score = 801 bits (2069), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 384/651 (58%), Positives = 511/651 (78%), Gaps = 9/651 (1%)
Query: 16 GSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVG 75
+ N PTL+ +LT +A++G LDPVVGR +I RV+++L RRTKNNP LIGEPGVG
Sbjct: 154 ANKSNNTPTLDSLARDLTVIAKDGTLDPVVGRNKEITRVIEVLSRRTKNNPVLIGEPGVG 213
Query: 76 KTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDE 135
KTAIAEGLAQ I + +VP+T++ K+V++LDMG +VAGTKYRGEFEERLKK+MEEI Q+
Sbjct: 214 KTAIAEGLAQAIVNNEVPETLKEKRVMSLDMGTVVAGTKYRGEFEERLKKVMEEIHQAGN 273
Query: 136 IILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERR 195
+ILFIDE+HTL+GAG AEGAIDA+NILKP+LARGELQCIGATTLDEYRK+IEKD ALERR
Sbjct: 274 VILFIDELHTLVGAGGAEGAIDASNILKPALARGELQCIGATTLDEYRKNIEKDAALERR 333
Query: 196 FQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAID 255
FQPV+V EP+V++TI+ILKGLR+RYE HH++ +DEAL +AA+LS +Y+SDRFLPDKAID
Sbjct: 334 FQPVQVDEPTVEDTIEILKGLRDRYEAHHRINISDEALEAAAKLSNRYVSDRFLPDKAID 393
Query: 256 LIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQI 315
LIDEA S+VRL+ P +E+E+E+ + EK+ AV Q+FE A LRD++ L+ Q
Sbjct: 394 LIDEASSKVRLKSHTTPNNLKEIEQEIENVKNEKDAAVHAQEFENAANLRDKQSKLEKQY 453
Query: 316 SALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLH 375
D E ++ G V ++E DI +++ WTGIP+ K++ ES+RLL +E+TLH
Sbjct: 454 E---DAKNEWKNSQ---GGVSTSLSEEDIAEVIAGWTGIPLTKINETESERLLNLEDTLH 507
Query: 376 KRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEE 435
+RVIGQ++AV +IS+A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+ALA FG ++
Sbjct: 508 ERVIGQNDAVNSISKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGEDD 567
Query: 436 AMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVF 495
AMIR+DMSEFME+H VS+L+G+PPGYVG+ +GGQLTE VRR+PY+V+LFDEIEKAHPDVF
Sbjct: 568 AMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKVRRKPYSVILFDEIEKAHPDVF 627
Query: 496 NMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNR 555
N++LQ+L+DG LTD+KGRTVDF+NT++IMTSNVG+ ++ R GF + D Y
Sbjct: 628 NILLQVLDDGHLTDTKGRTVDFRNTVIIMTSNVGAQELQD-QRFAGFGGASEGND--YET 684
Query: 556 IKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVT 615
I+ + +ELK FRPEFLNR+D++IVF +L+K E+KEI +M+ ++ RL ++I + VT
Sbjct: 685 IRKTMMKELKNSFRPEFLNRVDDIIVFHKLSKEELKEIVTMMVNKLTARLSEQNINIVVT 744
Query: 616 ERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVD 666
++ +E++ EEGY+P YGARPL RAI + +ED+++E +L EG V +D
Sbjct: 745 DKAKEKIAEEGYDPEYGARPLIRAIQKTVEDNLSELILDGNKIEGKEVTID 795
>gi|379058467|ref|ZP_09848993.1| Clp-family ATP-binding protease [Serinicoccus profundi MCCC
1A05965]
Length = 841
Score = 801 bits (2069), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/703 (58%), Positives = 532/703 (75%), Gaps = 26/703 (3%)
Query: 4 ESTEAVGAGVGGGSS--GNKMPTL--EEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 59
+ EA AGVG GS G + +L +++G NLT+ A EGKLDPV+GR+P+IERV+Q+L
Sbjct: 146 QGKEAATAGVGAGSQQEGQQAGSLVLDQFGRNLTQAAREGKLDPVIGREPEIERVMQVLS 205
Query: 60 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 119
RRTKNNP LIGEPGVGKTA+ EGLAQ I GDVP+T++ K++ TLD+G LVAG++YRG+F
Sbjct: 206 RRTKNNPVLIGEPGVGKTAVVEGLAQDIVRGDVPETLKEKQLYTLDLGALVAGSRYRGDF 265
Query: 120 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 179
EERLKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTL
Sbjct: 266 EERLKKVLKEIRTRGDIILFIDEIHTLVGAGAAEGAIDAASILKPMLARGELQTIGATTL 325
Query: 180 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 239
DEYRKHIEKD ALERRFQP++V EP++ I+ILKGLR+RYE HH++ TD AL++AA +
Sbjct: 326 DEYRKHIEKDAALERRFQPIQVAEPTLKHAIEILKGLRDRYEAHHRVTITDGALIAAATM 385
Query: 240 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 299
+ +YI+DRFLPDKAIDLIDEAG+R+R+R P + RE ++++ +EK A+ QDFE
Sbjct: 386 ADRYINDRFLPDKAIDLIDEAGARLRIRRMTAPPDLREFDEKIAHAKREKESAIDAQDFE 445
Query: 300 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPV 356
KA LRD E L A ++ KE + + VV EVD I +++A TGIPV
Sbjct: 446 KAARLRDEEHKL---TQARAEREKEWKNGDMD------VVAEVDEELIAEVLAAATGIPV 496
Query: 357 EKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTG 416
K+S +ES RLL ME+ LHKR+IG D+A+K +S+AIRR R GLK+P RP SFIF+GPTG
Sbjct: 497 FKLSEEESSRLLNMEQELHKRIIGMDDAIKGLSQAIRRTRAGLKDPRRPGGSFIFAGPTG 556
Query: 417 VGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRR 476
VGK+ELAKALA + FG E+++I LDMSE+ E+HTVS++ GSPPGYVGY EGGQLTE VRR
Sbjct: 557 VGKTELAKALAEFLFGDEDSLITLDMSEYSEKHTVSRMFGSPPGYVGYEEGGQLTEKVRR 616
Query: 477 RPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKG 536
+P++VVLFDEIEKAHPD+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N+G+ I K
Sbjct: 617 KPFSVVLFDEIEKAHPDIFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNLGTRDIAK- 675
Query: 537 GRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADI 596
G +GF D + SSY R+K+ VT+ELKQ+FRPEFLNR+D+ IVF QL++ E+ +I D+
Sbjct: 676 GVSLGFSAGPDTQ-SSYERMKNKVTDELKQHFRPEFLNRVDDTIVFPQLSQSEIVQIVDL 734
Query: 597 MLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLARE 656
M+ + +RLK KD+ +++T +E + + GY+P GARPLRRAI R +ED ++EK+L E
Sbjct: 735 MIARLDERLKDKDMAIELTSSAKELLAKRGYDPVLGARPLRRAIQREIEDQLSEKILFGE 794
Query: 657 IKEGDSVIVDV-DSDGN------VTVLNGSSGAPESLADPLPV 692
+ G VIVDV D GN V G P + D +PV
Sbjct: 795 LGTGQIVIVDVEDPVGNDKNRDKVFTFRGQQ-KPAEVPDTVPV 836
>gi|395769499|ref|ZP_10450014.1| Clp family ATP-binding protease [Streptomyces acidiscabies 84-104]
Length = 842
Score = 801 bits (2068), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/687 (58%), Positives = 531/687 (77%), Gaps = 16/687 (2%)
Query: 11 AGVGGGSSGNKMPTL--EEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCL 68
A GG + G +L +++G NLT+ A E KLDPV+GR+ +IERV+Q+L RRTKNNP L
Sbjct: 152 ATAGGPAEGTPSTSLVLDQFGRNLTQAARESKLDPVIGREKEIERVMQVLSRRTKNNPVL 211
Query: 69 IGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLME 128
IGEPGVGKTA+ EGLAQ I G+VP+T++ K + TLD+G LVAG++YRG+FEERLKK+++
Sbjct: 212 IGEPGVGKTAVVEGLAQAIVKGEVPETLKDKHLYTLDLGALVAGSRYRGDFEERLKKVLK 271
Query: 129 EIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEK 188
EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEYRKH+EK
Sbjct: 272 EIRTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIGATTLDEYRKHLEK 331
Query: 189 DPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRF 248
D ALERRFQP++V EPS+ TI+ILKGLR+RYE HH++ TDEALV AA L+ +YISDRF
Sbjct: 332 DAALERRFQPIQVAEPSLPHTIEILKGLRDRYEAHHRVSITDEALVQAATLADRYISDRF 391
Query: 249 LPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDRE 308
LPDKAIDLIDEAGSR+R+R P + RE ++++ + ++K A+ QDFEKA LRD+E
Sbjct: 392 LPDKAIDLIDEAGSRMRIRRMTAPPDLREFDEKIAGVRRDKESAIDSQDFEKAASLRDKE 451
Query: 309 MDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKVSTDESD 365
L A K + E +AGD+ VV EVD I +++ TGIPV K++ +ES
Sbjct: 452 KQLLA--------AKAKREKEWKAGDM-DVVAEVDGELIAEVLATATGIPVFKLTEEESS 502
Query: 366 RLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKA 425
RLL+ME+ LHKRVIGQ +AVKA+S+AIRR R GLK+P RP SFIF+GP+GVGK+EL+KA
Sbjct: 503 RLLRMEDELHKRVIGQKDAVKALSKAIRRTRAGLKDPKRPGGSFIFAGPSGVGKTELSKA 562
Query: 426 LAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFD 485
LA + FG E+A+I LDMSEF E+HTVS+L GSPPGYVGY EGGQLTE VRR+P++VVLFD
Sbjct: 563 LAEFLFGDEDALISLDMSEFSEKHTVSRLFGSPPGYVGYEEGGQLTEKVRRKPFSVVLFD 622
Query: 486 EIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLD 545
E+EKAHPD+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N+G+ I K G +GF
Sbjct: 623 EVEKAHPDIFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNLGTRDISK-GFNLGFAAT 681
Query: 546 YDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRL 605
D K S+Y R+K+ V++ELKQ+FRPEFLNR+D+++VF QLT+ ++ +I D+M+ +V +RL
Sbjct: 682 GDTK-SNYERMKNKVSDELKQHFRPEFLNRVDDVVVFPQLTQADILQIVDLMVGKVDERL 740
Query: 606 KTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIV 665
K +D+ +++++ +E + ++GY+P GARPLRR I R +ED+++EK+L E++ G V+V
Sbjct: 741 KDRDMGIELSQASKELLSKKGYDPVLGARPLRRTIQREIEDTLSEKILFGELRPGHIVVV 800
Query: 666 DVDSDGNVTVLNGSSGAPESLADPLPV 692
DV+ +G +L D P+
Sbjct: 801 DVEGEGETATFTFRGEEKSALPDVPPI 827
>gi|420213021|ref|ZP_14718362.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM001]
gi|394277269|gb|EJE21595.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM001]
Length = 817
Score = 801 bits (2068), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/653 (58%), Positives = 512/653 (78%), Gaps = 9/653 (1%)
Query: 16 GSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVG 75
+ N PTL+ +LT +A++G LDPVVGR +I RV+++L RRTKNNP LIGEPGVG
Sbjct: 154 ANKSNNTPTLDGLARDLTVIAKDGTLDPVVGRDKEITRVIEVLSRRTKNNPVLIGEPGVG 213
Query: 76 KTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDE 135
KTAIAEGLAQ I +VP+T++ K+V++LDMG +VAGTKYRGEFEERLKK+MEEI Q+
Sbjct: 214 KTAIAEGLAQAIVKNEVPETLKDKRVMSLDMGTVVAGTKYRGEFEERLKKVMEEIHQAGN 273
Query: 136 IILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERR 195
+ILFIDE+HTL+GAG AEGAIDA+NILKP+LARGELQCIGATTLDEYRK+IEKD ALERR
Sbjct: 274 VILFIDELHTLVGAGGAEGAIDASNILKPALARGELQCIGATTLDEYRKNIEKDAALERR 333
Query: 196 FQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAID 255
FQP++V EP+V++TI+ILKGLR+RYE HH++ +DEAL +AA+LS +Y+SDRFLPDKAID
Sbjct: 334 FQPIQVDEPTVEDTIEILKGLRDRYEAHHRINISDEALEAAAKLSDRYVSDRFLPDKAID 393
Query: 256 LIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQI 315
LIDEA S+VRL+ P +E+E+E+ ++ EK+ AV Q+FE A LRD++ L+ Q
Sbjct: 394 LIDEASSKVRLKSHTTPSNLKEIEQEIDKVKNEKDAAVHAQEFENAANLRDKQSKLEKQY 453
Query: 316 SALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLH 375
D E A+ G + ++E +I +++ WTGIP+ K++ ESDRLL +E+TLH
Sbjct: 454 E---DAKNEWKNAQ---GGLDTALSEENIAEVIAGWTGIPLTKINETESDRLLNLEDTLH 507
Query: 376 KRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEE 435
KRVIGQ++AV +IS+A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+ALA FG ++
Sbjct: 508 KRVIGQNDAVNSISKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGEDD 567
Query: 436 AMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVF 495
AMIR+DMSEFME+H VS+L+G+PPGYVG+ +GGQLTE VRR+PY+V+LFDEIEKAHPDVF
Sbjct: 568 AMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKVRRKPYSVILFDEIEKAHPDVF 627
Query: 496 NMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNR 555
N++LQ+L+DG LTD+KGRTVDF+NT++IMTSNVG+ ++ R GF + S Y
Sbjct: 628 NILLQVLDDGHLTDTKGRTVDFRNTVIIMTSNVGAQELQD-QRFAGF--GGASEGSDYET 684
Query: 556 IKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVT 615
++ + +ELK FRPEFLNR+D++IVF +LTK E+KEI +M+ ++ RL ++I + VT
Sbjct: 685 VRKTMMKELKNSFRPEFLNRVDDIIVFHKLTKDELKEIVTMMVNKLTHRLSEQNINIVVT 744
Query: 616 ERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVD 668
++ +E++ EEGY+P YGARPL RAI + +ED+++E +L EG V +D D
Sbjct: 745 DKAKEKIAEEGYDPEYGARPLIRAIQKTVEDNLSELILDGNKIEGKEVTIDHD 797
>gi|253681670|ref|ZP_04862467.1| negative regulator of genetic competence ClpC/MecB [Clostridium
botulinum D str. 1873]
gi|253561382|gb|EES90834.1| negative regulator of genetic competence ClpC/MecB [Clostridium
botulinum D str. 1873]
Length = 813
Score = 801 bits (2068), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/648 (59%), Positives = 518/648 (79%), Gaps = 7/648 (1%)
Query: 23 PTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEG 82
PTL++YG +LT +A +GKLDPV+GR + ERV+++L RR KNNPCLIG+PGVGKTAIAEG
Sbjct: 165 PTLDKYGRDLTNMAIDGKLDPVIGRDSETERVLEVLCRRIKNNPCLIGDPGVGKTAIAEG 224
Query: 83 LAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDE 142
LAQRI SG++P+ ++ K+V+TLD+ +VAG+KYRGEFE+R+KK+M+EI + +ILFIDE
Sbjct: 225 LAQRIVSGNIPEILKNKRVVTLDISSMVAGSKYRGEFEDRVKKVMDEIYKDGNVILFIDE 284
Query: 143 VHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVP 202
+HT++GAG AEGAIDA+NILKP+LARGELQCIGATT+DEYRK+IEKD ALERRFQPV V
Sbjct: 285 IHTIVGAGGAEGAIDASNILKPALARGELQCIGATTIDEYRKYIEKDSALERRFQPVNVG 344
Query: 203 EPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGS 262
EP+ +E+IQILKGLR++YE HH ++ TDEA+ +A +LS +YI+DR+LPDKAIDLIDEAG+
Sbjct: 345 EPTKEESIQILKGLRDKYEAHHGVKITDEAIEAAVELSDRYITDRYLPDKAIDLIDEAGA 404
Query: 263 RVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKG 322
+VR+++ +P + + LE+EL ++ KEK +A+ QDFEKA LRD+E +LK ++ D
Sbjct: 405 KVRIKNLTVPPDLKGLEEELEKVGKEKEDAITVQDFEKAASLRDKEKELKDKLKGFKDNW 464
Query: 323 KEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQD 382
K+ S+ T+ +V++ I +VS W+ +P+EK++ E+DRLLK+EE LHKRVIGQ+
Sbjct: 465 KKKSQVSTQ------IVSKEQIAQVVSTWSNVPIEKLTEKEADRLLKLEEILHKRVIGQN 518
Query: 383 EAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDM 442
EAVK+IS+A+RRARVGLK+P RPI SFIF GPTGVGK+EL+KALA FG E MIR+DM
Sbjct: 519 EAVKSISKAVRRARVGLKDPKRPIGSFIFLGPTGVGKTELSKALAEAMFGDENNMIRIDM 578
Query: 443 SEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQIL 502
SE+ME+H VS+L+GSPPGYVG+ EGGQLTE VRR PY+VVLFDEIEKAHP+VFN++LQIL
Sbjct: 579 SEYMEKHAVSRLVGSPPGYVGHDEGGQLTEKVRRNPYSVVLFDEIEKAHPEVFNILLQIL 638
Query: 503 EDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTE 562
EDGRLTDSKG+TVDF+NT++I+TSNVG+S I K +GF D+ + Y R+K V
Sbjct: 639 EDGRLTDSKGKTVDFRNTIIILTSNVGASTINKQN-TLGFSNSEDKAEDEYERMKDNVMV 697
Query: 563 ELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERV 622
ELK+ FRPEFLNR+D++IVF L + ++KEI +ML+EV RLK K++ ++ E+ + +
Sbjct: 698 ELKRSFRPEFLNRIDDIIVFHTLNQEDLKEIVKLMLQEVSSRLKNKEVYIEFDEKAEKLL 757
Query: 623 VEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSD 670
+G++ +YGARPLRR I + +ED ++E++L IK+G V V D
Sbjct: 758 ANKGFDTAYGARPLRRTITKTVEDKLSEEILKGVIKKGYHVNATVKDD 805
>gi|150392194|ref|YP_001322243.1| ATPase [Alkaliphilus metalliredigens QYMF]
gi|149952056|gb|ABR50584.1| ATPase AAA-2 domain protein [Alkaliphilus metalliredigens QYMF]
Length = 812
Score = 801 bits (2068), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/663 (58%), Positives = 517/663 (77%), Gaps = 10/663 (1%)
Query: 17 SSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGK 76
S P L++YG +L +++ EGKLDP++GR+ +I+RV+Q+L RRTKNNPCLIGEPGVGK
Sbjct: 158 SPKGNTPALDQYGRDLNEMSREGKLDPIIGRRIEIDRVIQVLSRRTKNNPCLIGEPGVGK 217
Query: 77 TAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEI 136
TAIAEGLAQ+I G+VP+ + GK+V+ LD+ ++AGTKYRGEFEER+KK+M E++ S ++
Sbjct: 218 TAIAEGLAQKIEEGNVPEMLTGKRVVNLDVASMIAGTKYRGEFEERMKKIMTELRDSTDV 277
Query: 137 ILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRF 196
ILFIDE+HT+IGAGAAEGA+DAANILKP+LARGELQ IGATTLDE+RKH EKD ALERRF
Sbjct: 278 ILFIDEIHTIIGAGAAEGAMDAANILKPALARGELQVIGATTLDEFRKHFEKDAALERRF 337
Query: 197 QPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDL 256
QP+ V EP+V++TI+IL GLR+RYE HH+++ TDEAL +AA+LS +YI DR+LPDKAIDL
Sbjct: 338 QPITVEEPTVEDTIKILAGLRDRYEAHHRVKITDEALEAAAELSDRYIMDRYLPDKAIDL 397
Query: 257 IDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQIS 316
IDEA S++R+ P R LE + ++ KEK EA+ QDFE+A ++RD E + +
Sbjct: 398 IDEAASKIRIETVTAPPNLRTLEDNIEKLAKEKEEAISIQDFERAAKIRDEEKKSREDLD 457
Query: 317 ALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHK 376
+ K K S E G VG +I IVS+WTG+PV K+ +ES RLLK+EE LH
Sbjct: 458 SAQRKWK--SSKENRNGIVGA----EEIAQIVSSWTGVPVMKLQEEESQRLLKLEEALHH 511
Query: 377 RVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEA 436
RVIGQ+ AVK+IS+AIRRARVGLK+P RPI SFIF GPTGVGK+EL++ALA FG E+A
Sbjct: 512 RVIGQEPAVKSISQAIRRARVGLKDPKRPIGSFIFLGPTGVGKTELSRALAEVMFGDEDA 571
Query: 437 MIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFN 496
MIR+DMSE+ME+HTVS+LIGSPPGYVG+ EGGQLTE VRR+PY+VVLFDEIEKAHPDVFN
Sbjct: 572 MIRIDMSEYMEKHTVSRLIGSPPGYVGFNEGGQLTEKVRRKPYSVVLFDEIEKAHPDVFN 631
Query: 497 MMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDY-DEKDSSYNR 555
++LQIL+DGRLTD++GR ++FKNT++IMTSNVG+ I+K R +GF D+ + Y +
Sbjct: 632 VLLQILDDGRLTDAQGRMINFKNTVIIMTSNVGAHTIKK-QRILGFSATVEDQAKNEYEK 690
Query: 556 IKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVT 615
+K V +EL++ FRPEFLNR+D+ IVF L + + +I D+M+ ++ RLK +I ++VT
Sbjct: 691 MKENVMDELRKTFRPEFLNRIDDSIVFHGLEREHIHQIVDLMIGDLKKRLKALNINIEVT 750
Query: 616 ERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTV 675
E + +V++G++P YGARPL+RAI +++ED ++E++L I+ G + V+VD G +
Sbjct: 751 EATKNHIVDQGFDPQYGARPLKRAIQKIVEDPLSEELLQGTIRNGQT--VNVDYQGEKLL 808
Query: 676 LNG 678
+N
Sbjct: 809 INA 811
>gi|416127894|ref|ZP_11597159.1| negative regulator of genetic competence clpC/mecB [Staphylococcus
epidermidis FRI909]
gi|418328513|ref|ZP_12939624.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis 14.1.R1.SE]
gi|418631361|ref|ZP_13193825.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU128]
gi|418634140|ref|ZP_13196536.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU129]
gi|420178488|ref|ZP_14684819.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM057]
gi|420179587|ref|ZP_14685875.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM053]
gi|420191066|ref|ZP_14697002.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM037]
gi|420200939|ref|ZP_14706577.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM031]
gi|420203524|ref|ZP_14709086.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM015]
gi|420233736|ref|ZP_14738315.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIH051475]
gi|319399727|gb|EFV87976.1| negative regulator of genetic competence clpC/mecB [Staphylococcus
epidermidis FRI909]
gi|365231831|gb|EHM72848.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis 14.1.R1.SE]
gi|374835462|gb|EHR99072.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU128]
gi|374837442|gb|EHS01006.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU129]
gi|394246423|gb|EJD91681.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM057]
gi|394253576|gb|EJD98581.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM053]
gi|394258024|gb|EJE02919.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM037]
gi|394267420|gb|EJE12013.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM031]
gi|394274485|gb|EJE18901.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM015]
gi|394304910|gb|EJE48301.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIH051475]
Length = 817
Score = 801 bits (2068), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/653 (58%), Positives = 512/653 (78%), Gaps = 9/653 (1%)
Query: 16 GSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVG 75
+ N PTL+ +LT +A++G LDPVVGR +I RV+++L RRTKNNP LIGEPGVG
Sbjct: 154 ANKSNNTPTLDGLARDLTVIAKDGTLDPVVGRDKEITRVIEVLSRRTKNNPVLIGEPGVG 213
Query: 76 KTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDE 135
KTAIAEGLAQ I +VP+T++ K+V++LDMG +VAGTKYRGEFEERLKK+MEEI Q+
Sbjct: 214 KTAIAEGLAQAIVKNEVPETLKDKRVMSLDMGTVVAGTKYRGEFEERLKKVMEEIHQAGN 273
Query: 136 IILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERR 195
+ILFIDE+HTL+GAG AEGAIDA+NILKP+LARGELQCIGATTLDEYRK+IEKD ALERR
Sbjct: 274 VILFIDELHTLVGAGGAEGAIDASNILKPALARGELQCIGATTLDEYRKNIEKDAALERR 333
Query: 196 FQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAID 255
FQP++V EP+V++TI+ILKGLR+RYE HH++ +DEAL +AA+LS +Y+SDRFLPDKAID
Sbjct: 334 FQPIQVDEPTVEDTIEILKGLRDRYEAHHRINISDEALEAAAKLSDRYVSDRFLPDKAID 393
Query: 256 LIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQI 315
LIDEA S+VRL+ P +E+E+E+ ++ EK+ AV Q+FE A LRD++ L+ Q
Sbjct: 394 LIDEASSKVRLKSHTTPSNLKEIEQEIDKVKNEKDAAVHAQEFENAANLRDKQSKLEKQY 453
Query: 316 SALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLH 375
D E A+ G + ++E +I +++ WTGIP+ K++ ESDRLL +E+TLH
Sbjct: 454 E---DAKNEWKNAQ---GGLDTALSEENIAEVIAGWTGIPLTKINETESDRLLNLEDTLH 507
Query: 376 KRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEE 435
KRVIGQ++AV +IS+A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+ALA FG ++
Sbjct: 508 KRVIGQNDAVNSISKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGEDD 567
Query: 436 AMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVF 495
AMIR+DMSEFME+H VS+L+G+PPGYVG+ +GGQLTE VRR+PY+V+LFDEIEKAHPDVF
Sbjct: 568 AMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKVRRKPYSVILFDEIEKAHPDVF 627
Query: 496 NMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNR 555
N++LQ+L+DG LTD+KGRTVDF+NT++IMTSNVG+ ++ R GF + S Y
Sbjct: 628 NILLQVLDDGHLTDTKGRTVDFRNTVIIMTSNVGAQELQD-QRFAGF--GGASEGSDYET 684
Query: 556 IKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVT 615
++ + +ELK FRPEFLNR+D++IVF +LTK E+KEI +M+ ++ RL ++I + VT
Sbjct: 685 VRKTMMKELKNSFRPEFLNRVDDIIVFHKLTKDELKEIVTMMVNKLTHRLSEQNINIVVT 744
Query: 616 ERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVD 668
++ +E++ EEGY+P YGARPL RAI + +ED+++E +L EG V +D D
Sbjct: 745 DKAKEKIAEEGYDPEYGARPLIRAIQKTVEDNLSELILDGNKIEGKEVTIDHD 797
>gi|289551675|ref|YP_003472579.1| ATP-dependent Clp protease, ATP-binding subunit ClpC/Negative
regulator of genetic competence clcC/mecB
[Staphylococcus lugdunensis HKU09-01]
gi|315659135|ref|ZP_07912000.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
lugdunensis M23590]
gi|385785222|ref|YP_005761395.1| putative stress response-related Clp ATPase [Staphylococcus
lugdunensis N920143]
gi|418416002|ref|ZP_12989205.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
lugdunensis ACS-027-V-Sch2]
gi|289181206|gb|ADC88451.1| ATP-dependent Clp protease, ATP-binding subunit ClpC/Negative
regulator of genetic competence clcC/mecB
[Staphylococcus lugdunensis HKU09-01]
gi|315495859|gb|EFU84189.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
lugdunensis M23590]
gi|339895478|emb|CCB54806.1| putative stress response-related Clp ATPase [Staphylococcus
lugdunensis N920143]
gi|410873860|gb|EKS21794.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
lugdunensis ACS-027-V-Sch2]
Length = 819
Score = 801 bits (2068), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/652 (59%), Positives = 512/652 (78%), Gaps = 9/652 (1%)
Query: 17 SSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGK 76
+ N PTL+ +LT +A++G LDPV+GR +I RV+++L RRTKNNP LIGEPGVGK
Sbjct: 155 NKSNNTPTLDSLARDLTVIAKDGTLDPVIGRTKEITRVIEVLSRRTKNNPVLIGEPGVGK 214
Query: 77 TAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEI 136
TAIAEGLAQ I + +VP+T++ K+V++LDMG +VAGTKYRGEFEERLKK+MEEI Q+ +
Sbjct: 215 TAIAEGLAQAIINNEVPETLKDKRVMSLDMGTVVAGTKYRGEFEERLKKVMEEIHQAGNV 274
Query: 137 ILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRF 196
ILFIDE+HTL+GAG AEGAIDA+NILKP+LARGELQCIGATTLDEYRK+IEKD ALERRF
Sbjct: 275 ILFIDELHTLVGAGGAEGAIDASNILKPALARGELQCIGATTLDEYRKNIEKDAALERRF 334
Query: 197 QPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDL 256
QPV+V EPSV++TI+ILKGLR+RYE HH++ +D+AL +AA+LS +Y+SDRFLPDKAIDL
Sbjct: 335 QPVQVDEPSVEDTIEILKGLRDRYEAHHRINISDQALDAAAKLSDRYVSDRFLPDKAIDL 394
Query: 257 IDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQIS 316
IDEA S+VRLR P + +E+E+ + KEK+ AV Q+FE A LRD++ L+ Q
Sbjct: 395 IDEASSKVRLRSHTTPTNLKSIEQEIETVKKEKDAAVHAQEFENAANLRDKQSKLEKQYE 454
Query: 317 ALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHK 376
D KE A+ G +++ DI +++ WTGIP+ K++ ESDRLL +E TLH
Sbjct: 455 ---DAKKEWQNAQ---GGSNTELSQEDIAEVIAGWTGIPLTKINETESDRLLNLEATLHG 508
Query: 377 RVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEA 436
RVIGQ++AV +IS+A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+ALA FG E+A
Sbjct: 509 RVIGQNDAVTSISKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAETMFGEEDA 568
Query: 437 MIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFN 496
MIR+DMSEFME+H VS+L+G+PPGYVG+ +GGQLTE VRR+PY+V+LFDEIEKAHPDVFN
Sbjct: 569 MIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKVRRKPYSVILFDEIEKAHPDVFN 628
Query: 497 MMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRI 556
++LQ+L+DG LTD+KGR VDF+NT++IMTSNVG+ ++ R GF + +D Y I
Sbjct: 629 ILLQVLDDGHLTDTKGRRVDFRNTVIIMTSNVGAQELQD-QRFAGFGGASEGQD--YETI 685
Query: 557 KSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTE 616
+ + +ELK FRPEFLNR+D++IVF +L+K E+KEI +M+ ++ RL +DI+++VT+
Sbjct: 686 RKTMMKELKNAFRPEFLNRVDDIIVFHKLSKDELKEIVTMMVNKLTQRLSEQDIQIEVTD 745
Query: 617 RFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVD 668
+ +E + EEGY+P YGARPL RAI + +ED+++E +L EG +V +D D
Sbjct: 746 KAKEVIAEEGYDPEYGARPLIRAIQKTVEDNLSELILEGNQIEGKAVTIDHD 797
>gi|172056112|ref|YP_001812572.1| ATPase [Exiguobacterium sibiricum 255-15]
gi|171988633|gb|ACB59555.1| ATPase AAA-2 domain protein [Exiguobacterium sibiricum 255-15]
Length = 815
Score = 801 bits (2068), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/675 (58%), Positives = 517/675 (76%), Gaps = 11/675 (1%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
++G S A G SG PTL+ +LT+ A E +LDPV+GR +I+RV+++L R
Sbjct: 141 LLGNSETTANASQAG--SGVATPTLDGLARDLTQQARETRLDPVIGRSKEIQRVIEVLSR 198
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNP LIGEPGVGKTA+ EGLAQ+I + +VP+T+ K+V+ LDMG LVAGTKYRGEFE
Sbjct: 199 RTKNNPVLIGEPGVGKTAVVEGLAQQIINNEVPETLRNKRVMVLDMGTLVAGTKYRGEFE 258
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
+RLKK+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTLD
Sbjct: 259 DRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLD 318
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRK+IEKD ALERRFQP++V EP+ DE QIL GLR+RYE HH++ TDEA+ A LS
Sbjct: 319 EYRKYIEKDAALERRFQPIQVAEPTTDEATQILFGLRDRYEAHHRVTITDEAIQEAVTLS 378
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
+YISDRFLPDKAIDLIDEA S+VRLR P +E+E +L I K+K+EAV+ Q+FEK
Sbjct: 379 DRYISDRFLPDKAIDLIDEAASKVRLRSYTAPPNLKEVEAKLEGIRKDKDEAVQSQEFEK 438
Query: 301 AGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVS 360
A LRD E L+ ++ L ++ + + G+ VT+ DI +V+ WTG+PV K++
Sbjct: 439 AASLRDTEQKLRDELERLKEEW------QNKQGNEKLEVTKDDIAQVVANWTGVPVTKIA 492
Query: 361 TDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 420
+E+DRLL++EE LH RVIGQ+EAVK+IS+AIRRAR GLK+P RPI SFIF GPTGVGK+
Sbjct: 493 EEETDRLLRLEEILHGRVIGQNEAVKSISKAIRRARAGLKDPKRPIGSFIFLGPTGVGKT 552
Query: 421 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 480
ELA+A+A FG E+A+IR+DMSE+ME+H S+L+GSPPGYVGY EGGQLTE VRR+PY+
Sbjct: 553 ELARAVAEAMFGDEDAIIRIDMSEYMEKHATSRLVGSPPGYVGYEEGGQLTEKVRRKPYS 612
Query: 481 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI 540
V+L DEIEKAHP+VFN++LQ+L+DGRLTDSKGRTVDF+NT+++MTSNVG+S +++ + +
Sbjct: 613 VILLDEIEKAHPEVFNILLQVLDDGRLTDSKGRTVDFRNTIIVMTSNVGASALKR-NKYV 671
Query: 541 GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 600
GF + D+ D Y +K V EELK+ FRPEFLNR+DE IVF L K ++EI +M K
Sbjct: 672 GFAVS-DDTDREYKDMKGKVMEELKRAFRPEFLNRIDETIVFHSLEKKHIEEIVKLMAKT 730
Query: 601 VFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEG 660
+ RL + + ++T ++ + GY+P YGARP+RRA+ R ED ++E +LA +I++G
Sbjct: 731 LEKRLAEQQVHFELTPAALSKIADIGYDPEYGARPIRRALQREAEDRLSEALLAGDIQKG 790
Query: 661 DSVIVDVDSDGNVTV 675
+ V +DV+ DG V
Sbjct: 791 ERVALDVE-DGEFIV 804
>gi|157690869|ref|YP_001485331.1| class III stress response-related ATPase [Bacillus pumilus
SAFR-032]
gi|194017457|ref|ZP_03056068.1| negative regulator of genetic competence ClpC/mecB [Bacillus
pumilus ATCC 7061]
gi|157679627|gb|ABV60771.1| class III stress response-related ATPase [Bacillus pumilus
SAFR-032]
gi|194010729|gb|EDW20300.1| negative regulator of genetic competence ClpC/mecB [Bacillus
pumilus ATCC 7061]
Length = 811
Score = 801 bits (2068), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/666 (60%), Positives = 523/666 (78%), Gaps = 10/666 (1%)
Query: 10 GAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLI 69
GA G +S PTL+ +LT +A+E LDPV+GR +I+RV+++L RRTKNNP LI
Sbjct: 149 GASAAGSNSNANTPTLDSLARDLTAIAKEDSLDPVIGRSKEIQRVIEVLSRRTKNNPVLI 208
Query: 70 GEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEE 129
GEPGVGKTAIAEGLAQ+I +VP+ + K+V+TLDMG +VAGTKYRGEFE+RLKK+M+E
Sbjct: 209 GEPGVGKTAIAEGLAQQIIHNEVPEILRDKRVMTLDMGTVVAGTKYRGEFEDRLKKVMDE 268
Query: 130 IKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKD 189
I+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTLDEYRK+IEKD
Sbjct: 269 IRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEYRKYIEKD 328
Query: 190 PALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFL 249
ALERRFQP++V +PSVDE+IQIL+GLR+RYE HH++ TDEA+ +A +LS +YISDRFL
Sbjct: 329 AALERRFQPIQVDQPSVDESIQILRGLRDRYEAHHRVSITDEAIEAAVKLSDRYISDRFL 388
Query: 250 PDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREM 309
PDKAIDLIDEAGS+VRLR P +ELE++L ++ KEK+ AV+ Q+FEKA LRD E
Sbjct: 389 PDKAIDLIDEAGSKVRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFEKAASLRDTEQ 448
Query: 310 DLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLK 369
L+ ++ KE + G V+ DI +VS+WTG+PV K++ E+D+LL
Sbjct: 449 RLREKVEVTKKSWKE------KQGQENSEVSVDDIAMVVSSWTGVPVSKIAQTETDKLLN 502
Query: 370 MEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAY 429
ME+ LH RVIGQDEAV A+++A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+ALA
Sbjct: 503 MEQLLHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAES 562
Query: 430 YFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEK 489
FG EEAMIR+DMSE+ME+H+ S+L+GSPPGYVGY EGGQLTE VRR+PY+VVL DEIEK
Sbjct: 563 IFGDEEAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPYSVVLLDEIEK 622
Query: 490 AHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEK 549
AHPDVFN++LQ+LEDGRLTDSKGRTVDF+NT+LIMTSNVG+S +++ + +GF++ ++
Sbjct: 623 AHPDVFNILLQVLEDGRLTDSKGRTVDFRNTILIMTSNVGASELKR-NKYVGFNV--QDE 679
Query: 550 DSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKD 609
+Y +K V ELK+ FRPEF+NR+DE+IVF L K +KEI +M ++ RLK +D
Sbjct: 680 GQNYKDMKGKVMGELKRAFRPEFINRIDEIIVFHSLEKKHLKEIVSLMSDQLTKRLKEQD 739
Query: 610 IELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDS 669
+ +++TE + ++ +EG + YGARPLRRAI + +ED ++E++L I++G +++DV+
Sbjct: 740 LSIELTEAAKAKIADEGVDLEYGARPLRRAIQKHVEDRLSEELLKGNIEKGQQIVLDVE- 798
Query: 670 DGNVTV 675
DG + V
Sbjct: 799 DGEIVV 804
>gi|228475267|ref|ZP_04059992.1| negative regulator of genetic competence ClpC/mecB [Staphylococcus
hominis SK119]
gi|228270732|gb|EEK12141.1| negative regulator of genetic competence ClpC/mecB [Staphylococcus
hominis SK119]
Length = 823
Score = 800 bits (2067), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/657 (58%), Positives = 511/657 (77%), Gaps = 11/657 (1%)
Query: 16 GSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVG 75
+ N PTL+ +LT +A++G LDPVVGR +I RV+++L RRTKNNP LIGEPGVG
Sbjct: 154 ANKSNNTPTLDGLARDLTVIAKDGTLDPVVGRDKEITRVIEVLSRRTKNNPVLIGEPGVG 213
Query: 76 KTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDE 135
KTAIAEGLAQ I + +VP+T++ K+V++LDMG +VAGTKYRGEFEERLKK+M+EI +
Sbjct: 214 KTAIAEGLAQAIVNNEVPETLKNKRVMSLDMGTVVAGTKYRGEFEERLKKVMDEIHHAGN 273
Query: 136 IILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERR 195
+ILFIDE+HTL+GAG AEGAIDA+NILKP+LARGELQCIGATTLDEYRK+IEKD ALERR
Sbjct: 274 VILFIDELHTLVGAGGAEGAIDASNILKPALARGELQCIGATTLDEYRKNIEKDAALERR 333
Query: 196 FQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAID 255
FQP++V EPSV++T+ ILKGLR+RYE HH++ +DEAL SAA+LS +Y+SDRFLPDKAID
Sbjct: 334 FQPIQVDEPSVEDTVAILKGLRDRYEAHHRINISDEALESAAKLSNRYVSDRFLPDKAID 393
Query: 256 LIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQI 315
LIDEA S+VRL+ P +E+E+E+ ++ EK+ AV Q+FE A LRD++ L+ Q
Sbjct: 394 LIDEASSKVRLKSHTTPSNLKEIEQEIEKVKNEKDAAVHAQEFENAANLRDKQSKLEKQY 453
Query: 316 SALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLH 375
S+ +T G +++ DI +++ WTGIP+ +++ ESDRLL +EETLH
Sbjct: 454 E------DAKSEWKTSQGGQSTSLSKEDIAEVIAGWTGIPLTRINETESDRLLNLEETLH 507
Query: 376 KRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEE 435
RVIGQ++AV +IS+A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+ALA FG E+
Sbjct: 508 DRVIGQNDAVTSISKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGEED 567
Query: 436 AMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVF 495
AMIR+DMSEFME+H VS+L+G+PPGYVG+ +GGQLTE VRR+PY+V+LFDEIEKAHPDVF
Sbjct: 568 AMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKVRRKPYSVILFDEIEKAHPDVF 627
Query: 496 NMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNR 555
N++LQ+L+DG LTD+KGR VDF+NT++IMTSNVG+ ++ R GF + +D Y
Sbjct: 628 NILLQVLDDGHLTDTKGRQVDFRNTVIIMTSNVGAQELQD-QRFAGFGGASEGQD--YET 684
Query: 556 IKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVT 615
I+ + +ELK FRPEFLNR+D++IVF +LTK E+KEI +M+ ++ RL +DI + VT
Sbjct: 685 IRKTMMKELKNSFRPEFLNRVDDIIVFHKLTKDELKEIVTMMVNKLTKRLSEQDINIVVT 744
Query: 616 ERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGN 672
++ +E++ EEGY+P YGARPL RAI + +ED+++E +L EG V +D DGN
Sbjct: 745 DKAKEKIAEEGYDPEYGARPLIRAIQKTVEDNLSELILDGNQIEGKEVT--IDHDGN 799
>gi|440705221|ref|ZP_20886021.1| negative regulator of genetic competence ClpC/MecB [Streptomyces
turgidiscabies Car8]
gi|440273037|gb|ELP61838.1| negative regulator of genetic competence ClpC/MecB [Streptomyces
turgidiscabies Car8]
Length = 842
Score = 800 bits (2067), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/693 (57%), Positives = 533/693 (76%), Gaps = 15/693 (2%)
Query: 3 GESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRT 62
G+ T G G+ + L+++G NLT+ A E KLDPV+GR+ +IERV+Q+L RRT
Sbjct: 147 GKETAGASGGPAEGTPSTSL-VLDQFGRNLTQAARESKLDPVIGREKEIERVMQVLSRRT 205
Query: 63 KNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEER 122
KNNP LIGEPGVGKTA+ EGLAQ I G+VP+T++ K + TLD+G LVAG++YRG+FEER
Sbjct: 206 KNNPVLIGEPGVGKTAVVEGLAQAIVKGEVPETLKDKHLYTLDLGALVAGSRYRGDFEER 265
Query: 123 LKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEY 182
LKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEY
Sbjct: 266 LKKVLKEIRTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIGATTLDEY 325
Query: 183 RKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQ 242
RKH+EKD ALERRFQP++V EPS+ TI+ILKGLR+RYE HH++ TDEALV AA L+ +
Sbjct: 326 RKHLEKDAALERRFQPIQVAEPSLPHTIEILKGLRDRYEAHHRVSITDEALVQAATLADR 385
Query: 243 YISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAG 302
YISDRFLPDKAIDLIDEAGSR+R+R P + RE ++++ + ++K A+ QDFEKA
Sbjct: 386 YISDRFLPDKAIDLIDEAGSRMRIRRMTAPPDLREFDEKIAGVRRDKESAIDSQDFEKAA 445
Query: 303 ELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKV 359
LRD+E L A K + E +AGD+ VV EVD I +++ TGIPV K+
Sbjct: 446 SLRDKEKQLLA--------AKAKREKEWKAGDM-DVVAEVDGELIAEVLATATGIPVFKL 496
Query: 360 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 419
+ +ES RLL+ME+ LHKRVIGQ +AVKA+S+AIRR R GLK+P RP SFIF+GP+GVGK
Sbjct: 497 TEEESSRLLRMEDELHKRVIGQVDAVKALSKAIRRTRAGLKDPKRPGGSFIFAGPSGVGK 556
Query: 420 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 479
+EL+KALA + FG E+A+I LDMSEF E+HTVS+L GSPPGYVGY EGGQLTE VRR+P+
Sbjct: 557 TELSKALAEFLFGDEDALISLDMSEFSEKHTVSRLFGSPPGYVGYEEGGQLTEKVRRKPF 616
Query: 480 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 539
+VVLFDE+EKAHPD+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N+G+ I K G
Sbjct: 617 SVVLFDEVEKAHPDIFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNLGTRDISK-GFN 675
Query: 540 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 599
+GF D+K S+Y R+K+ V++ELKQ+FRPEFLNR+D+++VF QLT++++ +I D+M+
Sbjct: 676 LGFAASGDKK-SNYERMKNKVSDELKQHFRPEFLNRVDDVVVFPQLTQVDILQIVDLMVG 734
Query: 600 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 659
+V +RLK +D+ +++++ +E + ++GY+P GARPLRR I R +ED+++EK+L E++
Sbjct: 735 KVDERLKDRDMGIELSQAAKELLSKKGYDPVMGARPLRRTIQREIEDTLSEKILFGELRP 794
Query: 660 GDSVIVDVDSDGNVTVLNGSSGAPESLADPLPV 692
G V+VD + +G +L D P+
Sbjct: 795 GHIVVVDTEGEGETATFTFRGEEKSALPDVPPI 827
>gi|452972567|gb|EME72396.1| ATP-dependent Clp protease ClpC [Bacillus sonorensis L12]
Length = 810
Score = 800 bits (2067), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/660 (60%), Positives = 518/660 (78%), Gaps = 9/660 (1%)
Query: 10 GAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLI 69
G G G +S PTL+ +LT +A+E LDPV+GR +I+RV+++L RRTKNNP LI
Sbjct: 148 GGGASGANSNANTPTLDSLARDLTAIAKEDSLDPVIGRSKEIQRVIEVLSRRTKNNPVLI 207
Query: 70 GEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEE 129
GEPGVGKTAIAEGLAQ+I + +VP+ + K+V+TLDMG +VAGTKYRGEFE+RLKK+M+E
Sbjct: 208 GEPGVGKTAIAEGLAQQIINNEVPEILRDKRVMTLDMGTVVAGTKYRGEFEDRLKKVMDE 267
Query: 130 IKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKD 189
I+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTLDEYRK+IEKD
Sbjct: 268 IRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEYRKYIEKD 327
Query: 190 PALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFL 249
ALERRFQP++V +PS +E+IQILKGLR+RYE HH++ TDEA+ +A +LS +YISDRFL
Sbjct: 328 AALERRFQPIQVDQPSPEESIQILKGLRDRYEAHHRVSITDEAIEAAVKLSDRYISDRFL 387
Query: 250 PDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREM 309
PDKAIDLIDEAGS+VRLR P +ELE++L ++ KEK+ AV+ Q+FEKA LRD E
Sbjct: 388 PDKAIDLIDEAGSKVRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFEKAASLRDTEQ 447
Query: 310 DLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLK 369
L+ Q+ KE + G VT DI +VS+WTG+PV K++ E+D+LL
Sbjct: 448 RLREQVEETKKTWKE------KQGQENSEVTVDDIAMVVSSWTGVPVSKIAQTETDKLLN 501
Query: 370 MEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAY 429
ME LH RVIGQDEAV A+++A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+ALA
Sbjct: 502 MESILHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAES 561
Query: 430 YFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEK 489
FG EEAMIR+DMSE+ME+H+ S+L+GSPPGYVGY EGGQLTE VRR+PY+VVL DEIEK
Sbjct: 562 IFGDEEAMIRIDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPYSVVLLDEIEK 621
Query: 490 AHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEK 549
AHPDVFN++LQ+LEDGRLTDSKGRTVDF+NT+LIMTSNVG+S + + + +GF++ ++
Sbjct: 622 AHPDVFNILLQVLEDGRLTDSKGRTVDFRNTILIMTSNVGASELRR-NKYVGFNV--QDE 678
Query: 550 DSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKD 609
+Y +K V ELK+ FRPEF+NR+DE+IVF L K +K+I +M ++ RLK +D
Sbjct: 679 TQNYKDMKDKVMGELKRAFRPEFINRIDEIIVFHSLEKKHLKDIVSLMSDQLTKRLKEQD 738
Query: 610 IELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDS 669
+ +++TE +E++ EEG + YGARPLRRAI + +ED ++E++L I +G +++DV++
Sbjct: 739 LSIELTEAAKEKIAEEGVDLEYGARPLRRAIQKHVEDRLSEELLKGNITKGQHIVLDVEN 798
>gi|407978585|ref|ZP_11159414.1| class III stress response-related ATPase [Bacillus sp. HYC-10]
gi|407414781|gb|EKF36407.1| class III stress response-related ATPase [Bacillus sp. HYC-10]
Length = 811
Score = 800 bits (2067), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/666 (60%), Positives = 523/666 (78%), Gaps = 10/666 (1%)
Query: 10 GAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLI 69
GA G +S PTL+ +LT +A+E LDPV+GR +I+RV+++L RRTKNNP LI
Sbjct: 149 GASAAGSNSNANTPTLDSLARDLTAIAKEDSLDPVIGRSKEIQRVIEVLSRRTKNNPVLI 208
Query: 70 GEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEE 129
GEPGVGKTAIAEGLAQ+I +VP+ + K+V+TLDMG +VAGTKYRGEFE+RLKK+M+E
Sbjct: 209 GEPGVGKTAIAEGLAQQIIHNEVPEILRDKRVMTLDMGTVVAGTKYRGEFEDRLKKVMDE 268
Query: 130 IKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKD 189
I+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTLDEYRK+IEKD
Sbjct: 269 IRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEYRKYIEKD 328
Query: 190 PALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFL 249
ALERRFQP++V +PSV+E+IQIL+GLR+RYE HH++ TDEA+ +A +LS +YISDRFL
Sbjct: 329 AALERRFQPIQVDQPSVEESIQILRGLRDRYEAHHRVSITDEAIEAAVKLSDRYISDRFL 388
Query: 250 PDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREM 309
PDKAIDLIDEAGS+VRLR P +ELE++L ++ KEK+ AV+ Q+FEKA LRD E
Sbjct: 389 PDKAIDLIDEAGSKVRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFEKAASLRDTEQ 448
Query: 310 DLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLK 369
L+ ++ KE + G V+ DI +VS+WTG+PV K++ E+D+LL
Sbjct: 449 RLREKVEVTKKSWKE------KQGQENSEVSVDDIAMVVSSWTGVPVSKIAQTETDKLLN 502
Query: 370 MEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAY 429
ME+ LH RVIGQDEAV A+++A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+ALA
Sbjct: 503 MEQLLHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAES 562
Query: 430 YFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEK 489
FG EEAMIR+DMSE+ME+H+ S+L+GSPPGYVGY EGGQLTE VRR+PY+VVL DEIEK
Sbjct: 563 IFGDEEAMIRIDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPYSVVLLDEIEK 622
Query: 490 AHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEK 549
AHPDVFN++LQ+LEDGRLTDSKGRTVDF+NT+LIMTSNVG+S +++ + +GF++ ++
Sbjct: 623 AHPDVFNILLQVLEDGRLTDSKGRTVDFRNTILIMTSNVGASELKR-NKYVGFNV--QDE 679
Query: 550 DSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKD 609
+Y +K V ELK+ FRPEF+NR+DE+IVF L K +KEI +M ++ RLK +D
Sbjct: 680 GQNYKDMKGKVMGELKRAFRPEFINRIDEIIVFHSLEKKHLKEIVSLMSDQLTKRLKEQD 739
Query: 610 IELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDS 669
+ +++TE + ++ EEG + YGARPLRRAI + +ED ++E++L I++G +++DV+
Sbjct: 740 LSIELTEAAKAKIAEEGVDLEYGARPLRRAIQKHVEDRLSEELLKGNIEKGQHIVLDVE- 798
Query: 670 DGNVTV 675
DG + V
Sbjct: 799 DGEIVV 804
>gi|418871544|ref|ZP_13425920.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus IS-125]
gi|418949170|ref|ZP_13501429.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus IS-157]
gi|375368097|gb|EHS72024.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus IS-125]
gi|375369614|gb|EHS73487.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus IS-157]
Length = 818
Score = 800 bits (2067), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/653 (58%), Positives = 511/653 (78%), Gaps = 9/653 (1%)
Query: 16 GSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVG 75
S N PTL+ +LT +A++G LDPV+GR +I RV+++L RRTKNNP LIGEPGVG
Sbjct: 154 ASKSNNTPTLDSLARDLTVIAKDGTLDPVIGRDKEITRVIEVLSRRTKNNPVLIGEPGVG 213
Query: 76 KTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDE 135
KTAIAEGLAQ I + +VP+T++ K+V++LDMG +VAGTKYRGEFEERLKK+MEEI+Q+
Sbjct: 214 KTAIAEGLAQAIVNNEVPETLKDKRVMSLDMGTVVAGTKYRGEFEERLKKVMEEIQQAGN 273
Query: 136 IILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERR 195
+ILFIDE+HTL+GAG AEGAIDA+NILKP+LARGELQCIGATTLDEYRK+IEKD ALERR
Sbjct: 274 VILFIDELHTLVGAGGAEGAIDASNILKPALARGELQCIGATTLDEYRKNIEKDAALERR 333
Query: 196 FQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAID 255
FQPV+V EPSV +T+ ILKGLR+RYE HH++ +DEA+ +A +LS +Y+SDRFLPDKAID
Sbjct: 334 FQPVQVDEPSVVDTVAILKGLRDRYEAHHRINISDEAIEAAVKLSNRYVSDRFLPDKAID 393
Query: 256 LIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQI 315
LIDEA S+VRL+ P +E+E+E+ ++ EK+ AV Q+FE A LRD++ L+ Q
Sbjct: 394 LIDEASSKVRLKSHTTPNNLKEIEQEIEKVKNEKDAAVHAQEFENAANLRDKQTKLEKQY 453
Query: 316 SALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLH 375
++ K + + ++E DI +++ WTGIP+ K++ ES++LL +E+TLH
Sbjct: 454 EEAKNEWKNAQNGMSTS------LSEEDIAEVIAGWTGIPLTKINETESEKLLSLEDTLH 507
Query: 376 KRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEE 435
+RVIGQ +AV +IS+A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+ALA FG E+
Sbjct: 508 ERVIGQKDAVNSISKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGDED 567
Query: 436 AMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVF 495
AMIR+DMSEFME+H VS+L+G+PPGYVG+ +GGQLTE VRR+PY+V+LFDEIEKAHPDVF
Sbjct: 568 AMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKVRRKPYSVILFDEIEKAHPDVF 627
Query: 496 NMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNR 555
N++LQ+L+DG LTD+KGRTVDF+NT++IMTSNVG+ ++ R GF D +D Y
Sbjct: 628 NILLQVLDDGHLTDTKGRTVDFRNTIIIMTSNVGAQELQD-QRFAGFGGSSDGQD--YET 684
Query: 556 IKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVT 615
I+ + +ELK FRPEFLNR+D++IVF +LTK E+KEI +M+ ++ +RL ++I + VT
Sbjct: 685 IRKTMLKELKNSFRPEFLNRVDDIIVFHKLTKEELKEIVTMMVNKLTNRLSEQNINIIVT 744
Query: 616 ERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVD 668
++ ++++ EEGY+P YGARPL RAI + +ED+++E +L EG V VD D
Sbjct: 745 DKAKDKIAEEGYDPEYGARPLIRAIQKTIEDNLSELILDGNQIEGKKVTVDHD 797
>gi|251809941|ref|ZP_04824414.1| ClpB ATPase [Staphylococcus epidermidis BCM-HMP0060]
gi|282875025|ref|ZP_06283900.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis SK135]
gi|417646131|ref|ZP_12296010.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU144]
gi|417657343|ref|ZP_12307008.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU028]
gi|417911486|ref|ZP_12555191.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU105]
gi|417914018|ref|ZP_12557673.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU109]
gi|418326361|ref|ZP_12937547.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU071]
gi|418412965|ref|ZP_12986212.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
epidermidis BVS058A4]
gi|418617569|ref|ZP_13180460.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU120]
gi|418621530|ref|ZP_13184299.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU123]
gi|418624700|ref|ZP_13187370.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU125]
gi|418629608|ref|ZP_13192105.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU127]
gi|418664665|ref|ZP_13226132.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU081]
gi|419770348|ref|ZP_14296428.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus IS-250]
gi|419772786|ref|ZP_14298812.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus IS-K]
gi|420169340|ref|ZP_14675941.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM087]
gi|420171652|ref|ZP_14678190.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM070]
gi|420172258|ref|ZP_14678768.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM067]
gi|420182216|ref|ZP_14688354.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM049]
gi|420186453|ref|ZP_14692521.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM040]
gi|420188161|ref|ZP_14694175.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM039]
gi|420195785|ref|ZP_14701572.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM021]
gi|420203004|ref|ZP_14708590.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM018]
gi|420207055|ref|ZP_14712558.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM008]
gi|420208689|ref|ZP_14714147.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM003]
gi|420213834|ref|ZP_14719116.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIH05005]
gi|420218208|ref|ZP_14723306.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIH05001]
gi|421607888|ref|ZP_16049122.1| ATP-dependent Clp protease, ATP-binding subunit ClpC
[Staphylococcus epidermidis AU12-03]
gi|251806484|gb|EES59141.1| ClpB ATPase [Staphylococcus epidermidis BCM-HMP0060]
gi|281296353|gb|EFA88872.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis SK135]
gi|329729477|gb|EGG65880.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU144]
gi|329734648|gb|EGG70955.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU028]
gi|341653063|gb|EGS76836.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU105]
gi|341653849|gb|EGS77614.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU109]
gi|365225772|gb|EHM67010.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU071]
gi|374410321|gb|EHQ81080.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU081]
gi|374817996|gb|EHR82168.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU120]
gi|374826897|gb|EHR90773.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU125]
gi|374828761|gb|EHR92586.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU123]
gi|374833371|gb|EHR97059.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU127]
gi|383357294|gb|EID34769.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus IS-250]
gi|383358879|gb|EID36321.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus IS-K]
gi|394231370|gb|EJD77000.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM087]
gi|394237114|gb|EJD82609.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM070]
gi|394242898|gb|EJD88275.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM067]
gi|394250200|gb|EJD95394.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM049]
gi|394252169|gb|EJD97210.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM040]
gi|394255421|gb|EJE00372.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM039]
gi|394262906|gb|EJE07658.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM021]
gi|394268877|gb|EJE13428.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM018]
gi|394276375|gb|EJE20716.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM008]
gi|394281390|gb|EJE25639.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM003]
gi|394284232|gb|EJE28386.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIH05005]
gi|394284688|gb|EJE28790.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIH05001]
gi|406656502|gb|EKC82907.1| ATP-dependent Clp protease, ATP-binding subunit ClpC
[Staphylococcus epidermidis AU12-03]
gi|410879558|gb|EKS27399.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
epidermidis BVS058A4]
Length = 817
Score = 800 bits (2067), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/653 (58%), Positives = 512/653 (78%), Gaps = 9/653 (1%)
Query: 16 GSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVG 75
+ N PTL+ +LT +A++G LDPVVGR +I RV+++L RRTKNNP LIGEPGVG
Sbjct: 154 ANKSNNTPTLDGLARDLTVIAKDGTLDPVVGRDKEITRVIEVLSRRTKNNPVLIGEPGVG 213
Query: 76 KTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDE 135
KTAIAEGLAQ I +VP+T++ K+V++LDMG +VAGTKYRGEFEERLKK+MEEI Q+
Sbjct: 214 KTAIAEGLAQAIVKNEVPETLKDKRVMSLDMGTVVAGTKYRGEFEERLKKVMEEIHQAGN 273
Query: 136 IILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERR 195
+ILFIDE+HTL+GAG AEGAIDA+NILKP+LARGELQCIGATTLDEYRK+IEKD ALERR
Sbjct: 274 VILFIDELHTLVGAGGAEGAIDASNILKPALARGELQCIGATTLDEYRKNIEKDAALERR 333
Query: 196 FQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAID 255
FQP++V EP+V++TI+ILKGLR+RYE HH++ +DEAL +AA+LS +Y+SDRFLPDKAID
Sbjct: 334 FQPIQVDEPTVEDTIEILKGLRDRYEAHHRINISDEALEAAAKLSDRYVSDRFLPDKAID 393
Query: 256 LIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQI 315
LIDEA S+VRL+ P +E+E+E+ ++ EK+ AV Q+FE A LRD++ L+ Q
Sbjct: 394 LIDEASSKVRLKSHTTPSNLKEIEQEIDKVKNEKDAAVHAQEFENAANLRDKQSKLEKQY 453
Query: 316 SALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLH 375
D E A+ G + ++E +I +++ WTGIP+ K++ ESDRLL +E+TLH
Sbjct: 454 E---DAKNEWKNAQ---GGLDTALSEENIAEVIAGWTGIPLTKINETESDRLLNLEDTLH 507
Query: 376 KRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEE 435
KRVIGQ++AV +IS+A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+ALA FG ++
Sbjct: 508 KRVIGQNDAVNSISKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGEDD 567
Query: 436 AMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVF 495
AMIR+DMSEFME+H VS+L+G+PPGYVG+ +GGQLTE VRR+PY+V+LFDEIEKAHPDVF
Sbjct: 568 AMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKVRRKPYSVILFDEIEKAHPDVF 627
Query: 496 NMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNR 555
N++LQ+L+DG LTD+KGRTVDF+NT++IMTSNVG+ ++ R GF + S Y
Sbjct: 628 NILLQVLDDGHLTDTKGRTVDFRNTVIIMTSNVGAQELQD-QRFAGF--GGASEGSDYET 684
Query: 556 IKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVT 615
++ + +ELK FRPEFLNR+D++IVF +LTK E+KEI +M+ ++ RL ++I + VT
Sbjct: 685 VRKTMMKELKNSFRPEFLNRVDDIIVFHKLTKDELKEIVTMMVNKLTHRLSEQNINIVVT 744
Query: 616 ERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVD 668
++ +E++ EEGY+P YGARPL RAI + +ED+++E +L EG V +D D
Sbjct: 745 DKAKEKIAEEGYDPEYGARPLIRAIQKTVEDNLSELILDGNKIEGKEVTIDHD 797
>gi|27467205|ref|NP_763842.1| endopeptidase [Staphylococcus epidermidis ATCC 12228]
gi|57866102|ref|YP_187761.1| ATP-dependent Clp protease, ATP-binding subunit ClpC
[Staphylococcus epidermidis RP62A]
gi|242241856|ref|ZP_04796301.1| ClpB ATPase [Staphylococcus epidermidis W23144]
gi|293367900|ref|ZP_06614538.1| conserved hypothetical protein [Staphylococcus epidermidis
M23864:W2(grey)]
gi|417658249|ref|ZP_12307885.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU045]
gi|417910375|ref|ZP_12554097.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU037]
gi|418604270|ref|ZP_13167628.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU041]
gi|418606457|ref|ZP_13169734.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU057]
gi|418609533|ref|ZP_13172675.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU065]
gi|418611880|ref|ZP_13174943.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU117]
gi|418626332|ref|ZP_13188945.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU126]
gi|420166780|ref|ZP_14673460.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM088]
gi|420175670|ref|ZP_14682104.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM061]
gi|420193494|ref|ZP_14699346.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM023]
gi|420196769|ref|ZP_14702508.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM020]
gi|420218753|ref|ZP_14723807.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIH04008]
gi|420222653|ref|ZP_14727570.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIH08001]
gi|420225510|ref|ZP_14730340.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIH06004]
gi|420226413|ref|ZP_14731197.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIH05003]
gi|420228732|ref|ZP_14733449.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIH04003]
gi|420231100|ref|ZP_14735755.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIH051668]
gi|81675398|sp|Q5HRM8.1|CLPC_STAEQ RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpC
gi|81843102|sp|Q8CQ88.1|CLPC_STAES RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpC
gi|27314747|gb|AAO03884.1|AE016744_287 endopeptidase [Staphylococcus epidermidis ATCC 12228]
gi|57636760|gb|AAW53548.1| ATP-dependent Clp protease, ATP-binding subunit ClpC
[Staphylococcus epidermidis RP62A]
gi|242234634|gb|EES36946.1| ClpB ATPase [Staphylococcus epidermidis W23144]
gi|291317929|gb|EFE58337.1| conserved hypothetical protein [Staphylococcus epidermidis
M23864:W2(grey)]
gi|329738043|gb|EGG74264.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU045]
gi|341650550|gb|EGS74370.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU037]
gi|374405287|gb|EHQ76229.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU041]
gi|374406860|gb|EHQ77735.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU065]
gi|374407864|gb|EHQ78709.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU057]
gi|374821395|gb|EHR85458.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU117]
gi|374832889|gb|EHR96592.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU126]
gi|394232700|gb|EJD78313.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM088]
gi|394242848|gb|EJD88226.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM061]
gi|394259936|gb|EJE04764.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM023]
gi|394267271|gb|EJE11872.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM020]
gi|394288915|gb|EJE32813.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIH08001]
gi|394291827|gb|EJE35612.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIH04008]
gi|394293577|gb|EJE37291.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIH06004]
gi|394298789|gb|EJE42351.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIH05003]
gi|394300195|gb|EJE43711.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIH04003]
gi|394303175|gb|EJE46603.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIH051668]
Length = 817
Score = 800 bits (2067), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/653 (58%), Positives = 512/653 (78%), Gaps = 9/653 (1%)
Query: 16 GSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVG 75
+ N PTL+ +LT +A++G LDPVVGR +I RV+++L RRTKNNP LIGEPGVG
Sbjct: 154 ANKSNNTPTLDGLARDLTVIAKDGTLDPVVGRDKEITRVIEVLSRRTKNNPVLIGEPGVG 213
Query: 76 KTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDE 135
KTAIAEGLAQ I +VP+T++ K+V++LDMG +VAGTKYRGEFEERLKK+MEEI Q+
Sbjct: 214 KTAIAEGLAQAIVKNEVPETLKDKRVMSLDMGTVVAGTKYRGEFEERLKKVMEEIHQAGN 273
Query: 136 IILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERR 195
+ILFIDE+HTL+GAG AEGAIDA+NILKP+LARGELQCIGATTLDEYRK+IEKD ALERR
Sbjct: 274 VILFIDELHTLVGAGGAEGAIDASNILKPALARGELQCIGATTLDEYRKNIEKDAALERR 333
Query: 196 FQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAID 255
FQP++V EP+V++TI+ILKGLR+RYE HH++ +DEAL +AA+LS +Y+SDRFLPDKAID
Sbjct: 334 FQPIQVDEPTVEDTIEILKGLRDRYEAHHRINISDEALEAAAKLSDRYVSDRFLPDKAID 393
Query: 256 LIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQI 315
LIDEA S+VRL+ P +E+E+E+ ++ EK+ AV Q+FE A LRD++ L+ Q
Sbjct: 394 LIDEASSKVRLKSHTTPSNLKEIEQEIDKVKNEKDAAVHAQEFENAANLRDKQSKLEKQY 453
Query: 316 SALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLH 375
D E A+ G + ++E +I +++ WTGIP+ K++ ESDRLL +E+TLH
Sbjct: 454 E---DAKNEWKNAQ---GGLDTALSEENIAEVIAGWTGIPLTKINETESDRLLNLEDTLH 507
Query: 376 KRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEE 435
KRVIGQ++AV +IS+A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+ALA FG ++
Sbjct: 508 KRVIGQNDAVNSISKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGEDD 567
Query: 436 AMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVF 495
AMIR+DMSEFME+H VS+L+G+PPGYVG+ +GGQLTE VRR+PY+V+LFDEIEKAHPDVF
Sbjct: 568 AMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKVRRKPYSVILFDEIEKAHPDVF 627
Query: 496 NMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNR 555
N++LQ+L+DG LTD+KGRTVDF+NT++IMTSNVG+ ++ R GF + S Y
Sbjct: 628 NILLQVLDDGHLTDTKGRTVDFRNTVIIMTSNVGAQELQD-QRFAGF--GGASEGSDYET 684
Query: 556 IKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVT 615
++ + +ELK FRPEFLNR+D++IVF +LTK E+KEI +M+ ++ RL ++I + VT
Sbjct: 685 VRKTMMKELKNSFRPEFLNRVDDIIVFHKLTKDELKEIVTMMVNKLTHRLSEQNINIVVT 744
Query: 616 ERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVD 668
++ +E++ EEGY+P YGARPL RAI + +ED+++E +L EG V +D D
Sbjct: 745 DKAKEKIAEEGYDPEYGARPLIRAIQKTVEDNLSELILDGNKIEGKEVTIDHD 797
>gi|334338866|ref|YP_004543846.1| ATPase AAA-2 domain-containing protein [Desulfotomaculum ruminis
DSM 2154]
gi|334090220|gb|AEG58560.1| ATPase AAA-2 domain protein [Desulfotomaculum ruminis DSM 2154]
Length = 815
Score = 800 bits (2066), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/651 (61%), Positives = 524/651 (80%), Gaps = 7/651 (1%)
Query: 17 SSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGK 76
S G K +L+++ +LT LA+E KLDPVVGR +IERV+Q+L RRTKNNP LIGEPGVGK
Sbjct: 161 SGGCKTVSLDQFSRDLTSLAKEDKLDPVVGRGKEIERVIQVLSRRTKNNPVLIGEPGVGK 220
Query: 77 TAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEI 136
TAIAEGLAQ+I G VP+ + ++V+TLD+ +VAGTKYRGEFE+RLKK+MEEI+Q+ I
Sbjct: 221 TAIAEGLAQKIIEGSVPEILLNRRVVTLDLAGMVAGTKYRGEFEDRLKKVMEEIRQAGNI 280
Query: 137 ILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRF 196
I+FIDE+HTLIGAGAAEGAIDAANILKP+LARGE+Q IGATTLDEYRK+IEKD ALERRF
Sbjct: 281 IVFIDELHTLIGAGAAEGAIDAANILKPALARGEIQTIGATTLDEYRKYIEKDSALERRF 340
Query: 197 QPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDL 256
QP++V EP+V+ETIQILKG+R++YE HH++ T+EAL +AA+LS +YI+DRFLPDKAIDL
Sbjct: 341 QPIQVDEPTVEETIQILKGIRDKYEAHHRVNITNEALEAAARLSDRYITDRFLPDKAIDL 400
Query: 257 IDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQIS 316
IDE+ SRVR++ P + ++ EK L ++ KEK A+ Q+FEKA ELRDRE L Q+
Sbjct: 401 IDESASRVRIKAFTTPPDLKDKEKLLVEVRKEKEAAINNQEFEKAAELRDREQKLTLQL- 459
Query: 317 ALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHK 376
++ +E S + + GD G +V+E DI HIV+AWTG+PV+K++ +ES RLL +EE LH+
Sbjct: 460 ---NQARE-SWNQAKGGD-GLIVSEEDIAHIVAAWTGVPVKKLAQEESQRLLNLEEALHQ 514
Query: 377 RVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEA 436
RVIGQDEAVKA++RA+RRAR GLK+P RP+ SFIF GPTGVGK+ELA+ALA FG E+A
Sbjct: 515 RVIGQDEAVKAVARAVRRARAGLKDPKRPVGSFIFLGPTGVGKTELARALAEALFGDEDA 574
Query: 437 MIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFN 496
++R+DMSE+ME+H VS+L+G+PPGYVGY EGGQLTEAVRR+PY+VVL DEIEKAHPDVFN
Sbjct: 575 LVRIDMSEYMEKHAVSRLVGAPPGYVGYDEGGQLTEAVRRKPYSVVLLDEIEKAHPDVFN 634
Query: 497 MMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRI 556
++LQ+LEDGRLTDSKGR VD +NT++IMTSN+G S ++ G ++GF D+ + Y ++
Sbjct: 635 ILLQVLEDGRLTDSKGRVVDMRNTVIIMTSNIGLSTLKATG-KVGFAASADQSRAEYEKM 693
Query: 557 KSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTE 616
K V E LK+ FRPEFLNR+DE IVF L++ +KEI ++MLKEV R++ ++ L+ +E
Sbjct: 694 KERVEEALKRTFRPEFLNRIDESIVFHSLSREHIKEIVNLMLKEVTKRMEDPEVYLEFSE 753
Query: 617 RFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDV 667
RER+ E GY+ +GARPLRR I R +ED ++E++L ++GD V VDV
Sbjct: 754 AARERLAETGYSEEFGARPLRREIQRKVEDRLSEELLRGTFQKGDKVAVDV 804
>gi|455652535|gb|EMF31161.1| Clp-family ATP-binding protease [Streptomyces gancidicus BKS 13-15]
Length = 841
Score = 800 bits (2066), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/687 (58%), Positives = 530/687 (77%), Gaps = 16/687 (2%)
Query: 11 AGVGGGSSGNKMPTL--EEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCL 68
A GG + G +L +++G NLT+ A E KLDPV+GR+ +IERV+Q+L RRTKNNP L
Sbjct: 151 ATAGGPAEGTPSTSLVLDQFGRNLTQAARESKLDPVIGREKEIERVMQVLSRRTKNNPVL 210
Query: 69 IGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLME 128
IGEPGVGKTA+ EGLAQ I G+VP+T++ K + TLD+G LVAG++YRG+FEERLKK+++
Sbjct: 211 IGEPGVGKTAVVEGLAQAIVKGEVPETLKDKHLYTLDLGALVAGSRYRGDFEERLKKVLK 270
Query: 129 EIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEK 188
EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEYRKH+EK
Sbjct: 271 EIRTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIGATTLDEYRKHLEK 330
Query: 189 DPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRF 248
D ALERRFQP++V EPS+ TI+ILKGLR+RYE HH++ TDEALV AA L+ +YISDRF
Sbjct: 331 DAALERRFQPIQVAEPSLPHTIEILKGLRDRYEAHHRVSITDEALVQAATLADRYISDRF 390
Query: 249 LPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDRE 308
LPDKAIDLIDEAGSR+R+R P + RE ++++ + ++K A+ QDFEKA LRD+E
Sbjct: 391 LPDKAIDLIDEAGSRMRIRRMTAPPDLREFDEKIAGVRRDKESAIDSQDFEKAASLRDKE 450
Query: 309 MDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKVSTDESD 365
L A K + E +AGD+ VV EVD I +++ TGIPV K++ +ES
Sbjct: 451 KQLLA--------AKAKREKEWKAGDM-DVVAEVDGELIAEVLATATGIPVFKLTEEESS 501
Query: 366 RLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKA 425
RLL+MEE LHKRVIGQD+AVKA+S+AIRR R GLK+P RP SFIF+GP+GVGK+EL+KA
Sbjct: 502 RLLRMEEELHKRVIGQDDAVKALSKAIRRTRAGLKDPKRPGGSFIFAGPSGVGKTELSKA 561
Query: 426 LAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFD 485
LA + FG E+A+I LDMSEF E+HTVS+L GSPPGYVGY EGGQLTE VRR+P++VVLFD
Sbjct: 562 LAEFLFGDEDALISLDMSEFSEKHTVSRLFGSPPGYVGYEEGGQLTEKVRRKPFSVVLFD 621
Query: 486 EIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLD 545
E+EKAHPD+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N+G+ I K G +GF
Sbjct: 622 EVEKAHPDIFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNLGTRDISK-GFNLGFAAA 680
Query: 546 YDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRL 605
D K ++Y R+K+ V++ELKQ+FRPEFLNR+D+++VF QLT+ ++ I D+M+ +V +RL
Sbjct: 681 GDTK-TNYERMKNKVSDELKQHFRPEFLNRVDDVVVFPQLTQGDILRIVDLMIGKVDERL 739
Query: 606 KTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIV 665
K +D+ +++++ +E + ++GY+P GARPLRR I R +EDS++EK+L E++ G V+V
Sbjct: 740 KDRDMGIELSQSAKELLSKKGYDPVLGARPLRRTIQREIEDSLSEKILFGELRPGHIVVV 799
Query: 666 DVDSDGNVTVLNGSSGAPESLADPLPV 692
D + +G +L D P+
Sbjct: 800 DTEGEGESQTFTFRGEEKSALPDVPPI 826
>gi|417643008|ref|ZP_12293079.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
warneri VCU121]
gi|445060498|ref|YP_007385902.1| ATP-dependent Clp protease, ATP-binding subunit ClpC
[Staphylococcus warneri SG1]
gi|330686262|gb|EGG97874.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU121]
gi|443426555|gb|AGC91458.1| ATP-dependent Clp protease, ATP-binding subunit ClpC
[Staphylococcus warneri SG1]
Length = 817
Score = 800 bits (2066), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/655 (58%), Positives = 511/655 (78%), Gaps = 9/655 (1%)
Query: 16 GSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVG 75
+ N PTL+ +LT +A++G LDPVVGR +I RV+++L RRTKNNP LIGEPGVG
Sbjct: 154 ANKSNNTPTLDSLARDLTIIAKDGTLDPVVGRDKEITRVIEVLSRRTKNNPVLIGEPGVG 213
Query: 76 KTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDE 135
KTAIAEGLAQ I + +VP+T++ K+V++LDMG +VAGTKYRGEFEERLKK+MEEI Q+
Sbjct: 214 KTAIAEGLAQAIVNNEVPETLKNKRVMSLDMGTVVAGTKYRGEFEERLKKVMEEIHQAGN 273
Query: 136 IILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERR 195
+ILFIDE+HTL+GAG AEGAIDA+NILKP+LARGELQCIGATTLDEYRK+IEKD ALERR
Sbjct: 274 VILFIDELHTLVGAGGAEGAIDASNILKPALARGELQCIGATTLDEYRKNIEKDAALERR 333
Query: 196 FQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAID 255
FQP++V EP+V++T+ ILKGLR+RYE HH++ +DEAL +AA+LS++Y+SDRFLPDKAID
Sbjct: 334 FQPIQVDEPTVEDTVSILKGLRDRYEAHHRINISDEALEAAAKLSHRYVSDRFLPDKAID 393
Query: 256 LIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQI 315
LIDEA S+VRL+ P +E+E+++ ++ EK+ AV Q+FE A LRD++ L+ Q
Sbjct: 394 LIDEASSKVRLKSHTTPNNLKEIEQQIEKVKNEKDAAVHAQEFENAANLRDKQTKLEKQY 453
Query: 316 SALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLH 375
++ K V ++E DI +++ WTGIP+ +++ ESDRLL +E+TLH
Sbjct: 454 EEAKNEWKNSQDG------VSTSLSEEDIAEVIAGWTGIPLTRINETESDRLLNLEDTLH 507
Query: 376 KRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEE 435
RVIGQ +AV +IS+A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+ALA FG ++
Sbjct: 508 DRVIGQKDAVTSISKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGEDD 567
Query: 436 AMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVF 495
AMIR+DMSEFME+H VS+L+G+PPGYVG+ +GGQLTE VRR+PY+V+LFDEIEKAHPDVF
Sbjct: 568 AMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKVRRKPYSVILFDEIEKAHPDVF 627
Query: 496 NMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNR 555
N++LQ+L+DG LTD+KGR VDF+NT++IMTSNVG+ ++ R GF D +D Y
Sbjct: 628 NILLQVLDDGHLTDTKGRQVDFRNTVIIMTSNVGAQELQD-QRFAGFGGADDGQD--YES 684
Query: 556 IKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVT 615
I+ + +ELK FRPEFLNR+D++IVF +L+K E+KEI +M+ ++ RL ++I ++VT
Sbjct: 685 IRKTMMKELKNAFRPEFLNRVDDIIVFHKLSKEELKEIVTMMVNKLTLRLSEQNINIKVT 744
Query: 616 ERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSD 670
E+ +E++ EEGY+P YGARPL RAI + +ED+++E +L EG V VD D +
Sbjct: 745 EKAKEKIAEEGYDPEYGARPLIRAIQKTVEDNLSELILDGNQLEGKEVTVDHDGE 799
>gi|239623567|ref|ZP_04666598.1| ATPase AAA-2 domain-containing protein [Clostridiales bacterium
1_7_47_FAA]
gi|239521598|gb|EEQ61464.1| ATPase AAA-2 domain-containing protein [Clostridiales bacterium
1_7_47FAA]
Length = 876
Score = 800 bits (2065), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 398/685 (58%), Positives = 527/685 (76%), Gaps = 12/685 (1%)
Query: 2 VGESTEAVGAGVG--GGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 59
+GE AV +G G GN PTL+ Y NLT+LA EG+LDPV+GR+ +I+RV+QIL
Sbjct: 142 MGEDAPAVKDEIGAKGARKGNATPTLDSYSRNLTQLAAEGRLDPVIGREQEIQRVIQILS 201
Query: 60 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 119
RRTKNNPCLIGEPGVGKTA+ EGLAQ I +G+VPDTI K+V+TLD+ +VAG+KYRGEF
Sbjct: 202 RRTKNNPCLIGEPGVGKTAVVEGLAQMITAGNVPDTIADKRVMTLDLSGMVAGSKYRGEF 261
Query: 120 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 179
EER+KK++ E+ +S +++LFIDE+HT+IGAG AEGA+DA+NILKPSLARGELQ IGATT+
Sbjct: 262 EERIKKVISEVIESGDVLLFIDEIHTIIGAGGAEGALDASNILKPSLARGELQLIGATTI 321
Query: 180 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 239
+EYRK+IEKD ALERRFQPV V EP+ +E+ ILKGLR RYE HHK+ TD+AL +A +L
Sbjct: 322 NEYRKYIEKDSALERRFQPVTVDEPTEEESEAILKGLRSRYEEHHKVEITDDALAAAVKL 381
Query: 240 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 299
S +YI+DRFLPDKAIDLIDEA SRVRL + P + ++ E E+ + + K EA++ + +E
Sbjct: 382 SSRYINDRFLPDKAIDLIDEASSRVRLMNYTKPAKIKDYEAEIDALEEGKEEAIKKEAYE 441
Query: 300 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 359
KAGE++ ++ L+ +I+ + M K + E VV+E +I +VS WT IPV K+
Sbjct: 442 KAGEIKKKQEKLREKIA------QTMEKWQKEKETRKLVVSENEIADVVSGWTKIPVRKL 495
Query: 360 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 419
+ +ES+RL+ +E LH+RV+GQ+EAV AIS+AIRR RVGLK+P RPI SF+F GPTGVGK
Sbjct: 496 AEEESERLMNLEGILHERVVGQEEAVTAISKAIRRGRVGLKDPGRPIGSFLFLGPTGVGK 555
Query: 420 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 479
+EL+KAL+ FG+E A+IR+DMSE+ME+H+VSK+IGSPPGYVGY EGGQL+E VRR PY
Sbjct: 556 TELSKALSEAMFGTENALIRVDMSEYMEKHSVSKMIGSPPGYVGYDEGGQLSEKVRRNPY 615
Query: 480 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 539
+V+LFDEIEKAHPDVFN++LQ+L+DG +TD++GR +DFKNT++IMTSN G+ I +R
Sbjct: 616 SVILFDEIEKAHPDVFNILLQVLDDGHITDAQGRKIDFKNTIIIMTSNAGAENI-ISPKR 674
Query: 540 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 599
+GF + D K + YN +K V +E+K+ F+PEFLNR+DE+IVF QLTK ++ IADIML+
Sbjct: 675 LGFGMTSDAK-ADYNFMKDRVMDEVKRLFKPEFLNRIDEIIVFHQLTKEHIRGIADIMLR 733
Query: 600 EVFDRLKTK-DIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIK 658
+ R K + I+L VT+ RE ++++GY+ YGARPLRR I L+ED MAE+ML IK
Sbjct: 734 TIGKRSKEQLGIQLAVTDGAREYLIDKGYDDKYGARPLRRTIQNLVEDKMAEEMLDGSIK 793
Query: 659 EGDSVIVDVDSDGNVTVLNGSSGAP 683
GD+V VD D + +T S AP
Sbjct: 794 AGDTVTVDFDGE-KLTFKARSKAAP 817
>gi|418619636|ref|ZP_13182459.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
hominis VCU122]
gi|374824202|gb|EHR88173.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
hominis VCU122]
Length = 823
Score = 800 bits (2065), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/657 (58%), Positives = 511/657 (77%), Gaps = 11/657 (1%)
Query: 16 GSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVG 75
+ N PTL+ +LT +A++G LDPVVGR +I RV+++L RRTKNNP LIGEPGVG
Sbjct: 154 ANKSNNTPTLDGLARDLTVIAKDGTLDPVVGRDKEITRVIEVLSRRTKNNPVLIGEPGVG 213
Query: 76 KTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDE 135
KTAIAEGLAQ I + +VP+T++ K+V++LDMG +VAGTKYRGEFEERLKK+M+EI +
Sbjct: 214 KTAIAEGLAQAIVNNEVPETLKNKRVMSLDMGTVVAGTKYRGEFEERLKKVMDEIHHAGN 273
Query: 136 IILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERR 195
+ILFIDE+HTL+GAG AEGAIDA+NILKP+LARGELQCIGATTLDEYRK+IEKD ALERR
Sbjct: 274 VILFIDELHTLVGAGGAEGAIDASNILKPALARGELQCIGATTLDEYRKNIEKDAALERR 333
Query: 196 FQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAID 255
FQP++V EPSV++T+ ILKGLR+RYE HH++ +DEAL +AA+LS +Y+SDRFLPDKAID
Sbjct: 334 FQPIQVDEPSVEDTVAILKGLRDRYEAHHRINISDEALEAAAKLSNRYVSDRFLPDKAID 393
Query: 256 LIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQI 315
LIDEA S+VRL+ P +E+E+E+ ++ EK+ AV Q+FE A LRD++ L+ Q
Sbjct: 394 LIDEASSKVRLKSHTTPSNLKEIEQEIEKVKNEKDAAVHAQEFENAANLRDKQSKLEKQY 453
Query: 316 SALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLH 375
++ K T G +++ DI +++ WTGIP+ +++ ESDRLL +EETLH
Sbjct: 454 EDAKNEWK------TSQGGQSTSLSKEDIAEVIAGWTGIPLTRINETESDRLLNLEETLH 507
Query: 376 KRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEE 435
RVIGQ++AV +IS+A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+ALA FG E+
Sbjct: 508 DRVIGQNDAVTSISKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGEED 567
Query: 436 AMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVF 495
AMIR+DMSEFME+H VS+L+G+PPGYVG+ +GGQLTE VRR+PY+V+LFDEIEKAHPDVF
Sbjct: 568 AMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKVRRKPYSVILFDEIEKAHPDVF 627
Query: 496 NMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNR 555
N++LQ+L+DG LTD+KGR VDF+NT++IMTSNVG+ ++ R GF + +D Y
Sbjct: 628 NILLQVLDDGHLTDTKGRQVDFRNTVIIMTSNVGAQELQD-QRFAGFGGASEGQD--YET 684
Query: 556 IKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVT 615
I+ + +ELK FRPEFLNR+D++IVF +LTK E+KEI +M+ ++ RL +DI + VT
Sbjct: 685 IRKTMMKELKNSFRPEFLNRVDDIIVFHKLTKDELKEIVTMMVNKLTKRLSEQDINIVVT 744
Query: 616 ERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGN 672
++ +E++ EEGY+P YGARPL RAI + +ED+++E +L EG V +D DGN
Sbjct: 745 DKAKEKIAEEGYDPEYGARPLIRAIQKTVEDNLSELILDGNQIEGKEVT--IDHDGN 799
>gi|317131213|ref|YP_004090527.1| ATPase AAA-2 domain-containing protein [Ethanoligenens harbinense
YUAN-3]
gi|315469192|gb|ADU25796.1| ATPase AAA-2 domain protein [Ethanoligenens harbinense YUAN-3]
Length = 825
Score = 800 bits (2065), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/670 (59%), Positives = 522/670 (77%), Gaps = 15/670 (2%)
Query: 19 GNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTA 78
G+ PTL+++G +LT+ A+ +LDPV+GR +IERV+QIL RRTKNNPCLIGEPGVGKTA
Sbjct: 169 GSNTPTLDQFGRDLTEQAKAARLDPVIGRAKEIERVIQILSRRTKNNPCLIGEPGVGKTA 228
Query: 79 IAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIIL 138
IAEGLA++I G +P+T++ K+V++LD+ ++AGTKYRGEFEER+KK +EE++++ +IL
Sbjct: 229 IAEGLAEKIVEGRLPETLKDKRVVSLDLTGMIAGTKYRGEFEERIKKALEEVRKAGNVIL 288
Query: 139 FIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQP 198
FIDE+HT+IGAGAAEGAIDAANILKP LARGE+Q IGATTL+EYRKHIEKD ALERRFQP
Sbjct: 289 FIDELHTIIGAGAAEGAIDAANILKPMLARGEIQVIGATTLNEYRKHIEKDAALERRFQP 348
Query: 199 VKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLID 258
V V EPS +E + ILKGLR++YE HHK+R TD AL +A LS +YISDRFLPDKAIDL+D
Sbjct: 349 VTVGEPSQEEALLILKGLRDKYEAHHKVRITDGALGAAVTLSARYISDRFLPDKAIDLMD 408
Query: 259 EAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISAL 318
EA SRVRL P + R+LE++L+++ +EK AV+ QDFE+A +LRD E + Q+
Sbjct: 409 EAASRVRLNAFTAPPDLRDLEEKLKKLAEEKEAAVKAQDFERAAKLRDEEKHVNEQM--- 465
Query: 319 VDKGKEMSKAETEAGDVGPV--VTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHK 376
E +K E A + V VTE DI IV+ WTG+PV+K++ +ES+RLL ME+ LHK
Sbjct: 466 -----ENTKKEWMADNARSVKEVTEEDIADIVAGWTGVPVKKLAEEESERLLHMEDVLHK 520
Query: 377 RVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEA 436
RV+GQ+EAV A+++AIRR RVGLK+P RP+ SFIF GPTGVGK+EL+KALA FG E A
Sbjct: 521 RVVGQNEAVAAVAKAIRRGRVGLKDPKRPVGSFIFLGPTGVGKTELSKALAEALFGDENA 580
Query: 437 MIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFN 496
MIR+DMSE+ME+HTVS+++GSPPGYVGY EGGQLTE VRR+PY+V+LFDEIEKAHPDVFN
Sbjct: 581 MIRVDMSEYMEKHTVSRMVGSPPGYVGYDEGGQLTEKVRRKPYSVLLFDEIEKAHPDVFN 640
Query: 497 MMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRI 556
++LQILEDG LTD++GR VDFKNT++IMTSNVG+ +I RR+GF + D +S I
Sbjct: 641 ILLQILEDGILTDAQGRKVDFKNTVIIMTSNVGARMITD-NRRLGF-ANADNAIASDKEI 698
Query: 557 KSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTE 616
KS V EL++ FRPEFLNR+D++IVF QLT ++++IA ML+ V R++ +I + ++
Sbjct: 699 KSDVMGELRRTFRPEFLNRVDDIIVFHQLTSADIQQIAGRMLETVAKRIQAMEIGITFSD 758
Query: 617 RFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTVL 676
+ +EG++P YGARPLRRAI +ED +E+ML +IK GD+V + D T++
Sbjct: 759 EVVTHIAKEGFDPVYGARPLRRAIQSKVEDKFSEEMLEGKIKTGDTVHTVLKDD---TIV 815
Query: 677 NGSSGAPESL 686
++ AP+ +
Sbjct: 816 FETAAAPQQV 825
>gi|283769680|ref|ZP_06342572.1| ATP-dependent Clp protease ATP-binding subunit clpC [Staphylococcus
aureus subsp. aureus H19]
gi|283459827|gb|EFC06917.1| ATP-dependent Clp protease ATP-binding subunit clpC [Staphylococcus
aureus subsp. aureus H19]
Length = 818
Score = 799 bits (2064), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 383/653 (58%), Positives = 514/653 (78%), Gaps = 9/653 (1%)
Query: 16 GSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVG 75
S N PTL+ +LT +A++G LDPV+GR +I RV+++L RRTKNNP LIGEPGVG
Sbjct: 154 ASKSNNTPTLDSLARDLTVIAKDGTLDPVIGRDKEITRVIEVLSRRTKNNPVLIGEPGVG 213
Query: 76 KTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDE 135
KTAIAEGLAQ I + +VP+T++ K+V++LDMG +VAGTKYRGEFEERLKK+MEEI+Q+
Sbjct: 214 KTAIAEGLAQAIVNNEVPETLKDKRVMSLDMGTVVAGTKYRGEFEERLKKVMEEIQQAGN 273
Query: 136 IILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERR 195
+ILFIDE+HTL+GAG AEGAIDA+NILKP+LARGELQCIGATTLDEYRK+IEKD ALERR
Sbjct: 274 VILFIDELHTLVGAGGAEGAIDASNILKPALARGELQCIGATTLDEYRKNIEKDAALERR 333
Query: 196 FQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAID 255
FQPV+V EPSV +T+ ILKGLR+RYE HH++ +DEA+ +A +LS +Y+SDRFLPDKAID
Sbjct: 334 FQPVQVDEPSVVDTVAILKGLRDRYEAHHRINISDEAIEAAVKLSNRYVSDRFLPDKAID 393
Query: 256 LIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQI 315
LIDEA S+VRL+ P +E+E+E+ ++ EK+ AV Q+FE A LRD++ L+ Q
Sbjct: 394 LIDEASSKVRLKSHTTPNNLKEIEQEIEKVKNEKDAAVHAQEFENAANLRDKQTKLEKQY 453
Query: 316 SALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLH 375
++ K T+ G + ++E DI +++ WTGIP+ K++ ES++LL +E+TLH
Sbjct: 454 EEAKNEWK-----NTQNG-MSTSLSEEDIAEVIAGWTGIPLTKINETESEKLLSLEDTLH 507
Query: 376 KRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEE 435
+RVIGQ +AV +IS+A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+ALA FG ++
Sbjct: 508 ERVIGQKDAVNSISKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGDDD 567
Query: 436 AMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVF 495
AMIR+DMSEFME+H VS+L+G+PPGYVG+ +GGQLTE VRR+PY+V+LFDEIEKAHPDVF
Sbjct: 568 AMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKVRRKPYSVILFDEIEKAHPDVF 627
Query: 496 NMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNR 555
N++LQ+L+DG LTD+KGRTVDF+NT++IMTSNVG+ ++ R GF D +D Y
Sbjct: 628 NILLQVLDDGHLTDTKGRTVDFRNTIIIMTSNVGAQELQD-QRFAGFGGSSDGQD--YET 684
Query: 556 IKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVT 615
I+ + +ELK FRPEFLNR+D++IVF +LTK E+KEI +M+ ++ +RL ++I++ VT
Sbjct: 685 IRKTMLKELKNSFRPEFLNRVDDIIVFHKLTKEELKEIVTMMVNKLTNRLSEQNIKIIVT 744
Query: 616 ERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVD 668
++ ++++ EEGY+P YGARPL RAI + +ED+++E +L EG V VD D
Sbjct: 745 DKAKDKIAEEGYDPEYGARPLIRAIQKTIEDNLSELILDGNQIEGKKVTVDHD 797
>gi|407475965|ref|YP_006789842.1| class III stress response-related ATPase [Exiguobacterium
antarcticum B7]
gi|407060044|gb|AFS69234.1| class III stress response-related ATPase [Exiguobacterium
antarcticum B7]
Length = 815
Score = 799 bits (2064), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/675 (58%), Positives = 517/675 (76%), Gaps = 11/675 (1%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
++G S A G SG PTL+ +LT+ A E +LDPV+GR +I+RV+++L R
Sbjct: 141 LLGNSETTANASQAG--SGVATPTLDGLARDLTQQARETRLDPVIGRAKEIQRVIEVLSR 198
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNP LIGEPGVGKTA+ EGLAQ+I + +VP+T+ K+V+ LDMG LVAGTKYRGEFE
Sbjct: 199 RTKNNPVLIGEPGVGKTAVVEGLAQQIVNNEVPETLRNKRVMVLDMGTLVAGTKYRGEFE 258
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
+RLKK+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQC+GATTLD
Sbjct: 259 DRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCVGATTLD 318
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRK+IEKD ALERRFQP++V EP+ DE QIL GLR+RYE HH++ TDEA+ A LS
Sbjct: 319 EYRKYIEKDAALERRFQPIQVAEPTTDEATQILFGLRDRYEAHHRVTITDEAIHEAVTLS 378
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
+YISDRFLPDKAIDL+DEA S+VRLR P +E+E +L I K+K+EAV+ Q+FEK
Sbjct: 379 DRYISDRFLPDKAIDLVDEAASKVRLRSYTAPPNLKEVEAKLEGIRKDKDEAVQSQEFEK 438
Query: 301 AGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVS 360
A LRD E L+ ++ L ++ + + G+ VT+ DI +V+ WTG+PV K++
Sbjct: 439 AASLRDTEQKLRDELERLKEEW------QNKQGNEKLEVTKDDIAQVVANWTGVPVTKIA 492
Query: 361 TDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 420
+E+DRLL++EE LH RVIGQ+EAVK+IS+AIRRAR GLK+P RPI SFIF GPTGVGK+
Sbjct: 493 EEETDRLLRLEEILHGRVIGQNEAVKSISKAIRRARAGLKDPKRPIGSFIFLGPTGVGKT 552
Query: 421 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 480
ELA+A+A FG E+A+IR+DMSE+ME+H S+L+GSPPGYVGY EGGQLTE VRR+PY+
Sbjct: 553 ELARAVAEAMFGDEDAIIRIDMSEYMEKHATSRLVGSPPGYVGYEEGGQLTEKVRRKPYS 612
Query: 481 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI 540
V+L DEIEKAHP+VFN++LQ+L+DGRLTDSKGRTVDF+NT+++MTSNVG+S +++ + +
Sbjct: 613 VILLDEIEKAHPEVFNILLQVLDDGRLTDSKGRTVDFRNTIIVMTSNVGASALKR-NKYV 671
Query: 541 GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 600
GF + D+ D Y +K V +ELK+ FRPEFLNR+DE IVF L K ++EI +M K
Sbjct: 672 GFAVS-DDTDREYKDMKGKVMDELKKAFRPEFLNRIDETIVFHSLEKKHIEEIVKLMAKT 730
Query: 601 VFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEG 660
+ RL + + ++T ++ + GY+P YGARP+RRA+ R ED ++E +LA +I++G
Sbjct: 731 LEKRLAEQQVHFELTPAALSKIADIGYDPEYGARPIRRALQREAEDRLSEALLAGDIQKG 790
Query: 661 DSVIVDVDSDGNVTV 675
+ V +DV+ DG V
Sbjct: 791 ERVALDVE-DGEFIV 804
>gi|291438069|ref|ZP_06577459.1| ATP-dependent Clp protease [Streptomyces ghanaensis ATCC 14672]
gi|291340964|gb|EFE67920.1| ATP-dependent Clp protease [Streptomyces ghanaensis ATCC 14672]
Length = 841
Score = 799 bits (2064), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/687 (58%), Positives = 529/687 (77%), Gaps = 16/687 (2%)
Query: 11 AGVGGGSSGNKMPTL--EEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCL 68
A GG + G +L +++G NLT+ A E KLDPV+GR+ +IERV+Q+L RRTKNNP L
Sbjct: 151 ATAGGPAEGTPSTSLVLDQFGRNLTQAARESKLDPVIGREKEIERVMQVLSRRTKNNPVL 210
Query: 69 IGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLME 128
IGEPGVGKTA+ EGLAQ I G+VP+T++ K + TLD+G LVAG++YRG+FEERLKK+++
Sbjct: 211 IGEPGVGKTAVVEGLAQAIVKGEVPETLKDKHLYTLDLGALVAGSRYRGDFEERLKKVLK 270
Query: 129 EIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEK 188
EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEYRKH+EK
Sbjct: 271 EIRTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIGATTLDEYRKHLEK 330
Query: 189 DPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRF 248
D ALERRFQP++V EPS+ TI+ILKGLR+RYE HH++ TDEALV AA L+ +YISDRF
Sbjct: 331 DAALERRFQPIQVAEPSLPHTIEILKGLRDRYEAHHRVSITDEALVQAATLADRYISDRF 390
Query: 249 LPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDRE 308
LPDKAIDLIDEAGSR+R+R P + RE ++++ + ++K A+ QDFEKA LRD+E
Sbjct: 391 LPDKAIDLIDEAGSRMRIRRMTAPPDLREFDEKIAGVRRDKESAIDSQDFEKAASLRDKE 450
Query: 309 MDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKVSTDESD 365
L A K + E +AGD+ VV EVD I +++ TGIPV K++ +ES
Sbjct: 451 KQLLA--------AKAKREKEWKAGDM-DVVAEVDGELIAEVLATATGIPVFKLTEEESS 501
Query: 366 RLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKA 425
RLL+ME+ LHKRVIGQD+AVKA+S+AIRR R GLK+P RP SFIF+GP+GVGK+EL+KA
Sbjct: 502 RLLRMEDELHKRVIGQDDAVKALSKAIRRTRAGLKDPKRPGGSFIFAGPSGVGKTELSKA 561
Query: 426 LAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFD 485
LA + FG E+A+I LDMSEF E+HTVS+L GSPPGYVGY EGGQLTE VRR+P++VVLFD
Sbjct: 562 LAEFLFGDEDALISLDMSEFSEKHTVSRLFGSPPGYVGYEEGGQLTEKVRRKPFSVVLFD 621
Query: 486 EIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLD 545
E+EKAHPD+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N+G+ I K G +GF
Sbjct: 622 EVEKAHPDIFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNLGTRDISK-GFNLGFAAA 680
Query: 546 YDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRL 605
D K ++Y R+K+ V++ELKQ+FRPEFLNR+D+++VF QLT+ ++ I D+M+ +V +RL
Sbjct: 681 GDTK-TNYERMKNKVSDELKQHFRPEFLNRVDDVVVFPQLTQNDILRIVDLMIDKVDERL 739
Query: 606 KTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIV 665
K +D+ +++++ +E + +GY+P GARPLRR I R +EDS++EK+L E++ G V+V
Sbjct: 740 KDRDMGIELSQSAKELLSRKGYDPVLGARPLRRTIQREIEDSLSEKILFGELRPGHIVVV 799
Query: 666 DVDSDGNVTVLNGSSGAPESLADPLPV 692
D + +G +L D P+
Sbjct: 800 DTEGEGESQTFTFRGEEKSALPDVPPI 826
>gi|329939478|ref|ZP_08288814.1| Clp-family ATP-binding protease [Streptomyces griseoaurantiacus
M045]
gi|329301707|gb|EGG45601.1| Clp-family ATP-binding protease [Streptomyces griseoaurantiacus
M045]
Length = 841
Score = 799 bits (2064), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/687 (58%), Positives = 530/687 (77%), Gaps = 16/687 (2%)
Query: 11 AGVGGGSSGNKMPTL--EEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCL 68
A GG + G +L +++G NLT+ A E KLDPV+GR+ +IERV+Q+L RRTKNNP L
Sbjct: 151 ATAGGPAEGTPSTSLVLDQFGRNLTQAARESKLDPVIGREKEIERVMQVLSRRTKNNPVL 210
Query: 69 IGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLME 128
IGEPGVGKTA+ EGLAQ I G+VP+T++ K + TLD+G LVAG++YRG+FEERLKK+++
Sbjct: 211 IGEPGVGKTAVVEGLAQAIVKGEVPETLKDKHLYTLDLGALVAGSRYRGDFEERLKKVLK 270
Query: 129 EIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEK 188
EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEYRKH+EK
Sbjct: 271 EIRTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIGATTLDEYRKHLEK 330
Query: 189 DPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRF 248
D ALERRFQP++V EPS+ TI+ILKGLR+RYE HH++ TDEALV AA L+ +YISDRF
Sbjct: 331 DAALERRFQPIQVAEPSLPHTIEILKGLRDRYEAHHRVSITDEALVQAATLADRYISDRF 390
Query: 249 LPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDRE 308
LPDKAIDLIDEAGSR+R+R P + RE ++++ + ++K A+ QDFEKA LRD+E
Sbjct: 391 LPDKAIDLIDEAGSRMRIRRMTAPPDLREFDEKIAGVRRDKESAIDSQDFEKAASLRDKE 450
Query: 309 MDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKVSTDESD 365
L A K + E +AGD+ VV EVD I +++ TGIPV K++ +ES
Sbjct: 451 KQLLA--------AKAKREKEWKAGDMD-VVAEVDGDLIAEVLATATGIPVFKLTEEESS 501
Query: 366 RLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKA 425
RLL+ME+ LHKRVIGQ +AVKA+S+AIRR R GLK+P RP SFIF+GP+GVGK+EL+KA
Sbjct: 502 RLLRMEDELHKRVIGQKDAVKALSKAIRRTRAGLKDPKRPGGSFIFAGPSGVGKTELSKA 561
Query: 426 LAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFD 485
LA + FG E+A+I LDMSEF E+HTVS+L GSPPGYVGY EGGQLTE VRR+P++VVLFD
Sbjct: 562 LAEFLFGDEDALISLDMSEFSEKHTVSRLFGSPPGYVGYEEGGQLTEKVRRKPFSVVLFD 621
Query: 486 EIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLD 545
E+EKAHPD+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N+G+ I K G +GF
Sbjct: 622 EVEKAHPDIFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNLGTRDISK-GFNLGFAAQ 680
Query: 546 YDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRL 605
D K S+Y R+K+ V++ELKQ+FRPEFLNR+D+++VF QLT+ ++ I D+M+++V +RL
Sbjct: 681 GDTK-SNYERMKNKVSDELKQHFRPEFLNRVDDVVVFPQLTQQDILAIVDLMIEKVDERL 739
Query: 606 KTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIV 665
K +D+ L++++ +E + +GY+P GARPLRR I R +ED+++EK+L E++ G V+V
Sbjct: 740 KDRDMGLELSQSAKELLSRKGYDPVLGARPLRRTIQREVEDTLSEKILFGELRPGHIVVV 799
Query: 666 DVDSDGNVTVLNGSSGAPESLADPLPV 692
D + +G+ +L D P+
Sbjct: 800 DTEGEGDTATFTFRGEEKAALPDVPPI 826
>gi|82750232|ref|YP_415973.1| endopeptidase [Staphylococcus aureus RF122]
gi|282915846|ref|ZP_06323611.1| ATP-dependent Clp protease ATP-binding subunit clpC [Staphylococcus
aureus subsp. aureus D139]
gi|122063322|sp|Q2YSD6.1|CLPC_STAAB RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpC
gi|82655763|emb|CAI80163.1| endopeptidase [Staphylococcus aureus RF122]
gi|282320142|gb|EFB50487.1| ATP-dependent Clp protease ATP-binding subunit clpC [Staphylococcus
aureus subsp. aureus D139]
Length = 818
Score = 799 bits (2064), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 383/653 (58%), Positives = 513/653 (78%), Gaps = 9/653 (1%)
Query: 16 GSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVG 75
S N PTL+ +LT +A++G LDPV+GR +I RV+++L RRTKNNP LIGEPGVG
Sbjct: 154 ASKSNNTPTLDSLARDLTVIAKDGTLDPVIGRDKEITRVIEVLSRRTKNNPVLIGEPGVG 213
Query: 76 KTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDE 135
KTAIAEGLAQ I + +VP+T++ K+V++LDMG +VAGTKYRGEFEERLKK+MEEI+Q+
Sbjct: 214 KTAIAEGLAQAIVNNEVPETLKDKRVMSLDMGTVVAGTKYRGEFEERLKKVMEEIQQAGN 273
Query: 136 IILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERR 195
+ILFIDE+HTL+GAG AEGAIDA+NILKP+LARGELQCIGATTLDEYRK+IEKD ALERR
Sbjct: 274 VILFIDELHTLVGAGGAEGAIDASNILKPALARGELQCIGATTLDEYRKNIEKDAALERR 333
Query: 196 FQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAID 255
FQPV+V EPSV +T+ ILKGLR+RYE HH++ +DEA+ +A +LS +Y+SDRFLPDKAID
Sbjct: 334 FQPVQVDEPSVVDTVAILKGLRDRYEAHHRINISDEAIEAAVKLSNRYVSDRFLPDKAID 393
Query: 256 LIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQI 315
LIDEA S+VRL+ P +E+E+E+ ++ EK+ AV Q+FE A LRD++ L+ Q
Sbjct: 394 LIDEASSKVRLKSHTTPNNLKEIEQEIEKVKNEKDAAVHAQEFENAANLRDKQTKLEKQY 453
Query: 316 SALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLH 375
++ K T+ G + ++E DI +++ WTGIP+ K++ ES++LL +E+TLH
Sbjct: 454 EEAKNEWK-----NTQNG-MSTSLSEEDIAEVIAGWTGIPLTKINETESEKLLSLEDTLH 507
Query: 376 KRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEE 435
+RVIGQ +AV +IS+A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+ALA FG ++
Sbjct: 508 ERVIGQKDAVNSISKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGDDD 567
Query: 436 AMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVF 495
AMIR+DMSEFME+H VS+L+G+PPGYVG+ +GGQLTE VRR+PY+V+LFDEIEKAHPDVF
Sbjct: 568 AMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKVRRKPYSVILFDEIEKAHPDVF 627
Query: 496 NMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNR 555
N++LQ+L+DG LTD+KGRTVDF+NT++IMTSNVG+ ++ R GF D +D Y
Sbjct: 628 NILLQVLDDGHLTDTKGRTVDFRNTIIIMTSNVGAQELQD-QRFAGFGGSSDGQD--YET 684
Query: 556 IKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVT 615
I+ + +ELK FRPEFLNR+D++IVF +LTK E+KEI +M+ ++ +RL ++I + VT
Sbjct: 685 IRKTMLKELKNSFRPEFLNRVDDIIVFHKLTKEELKEIVTMMVNKLTNRLSEQNINIIVT 744
Query: 616 ERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVD 668
++ ++++ EEGY+P YGARPL RAI + +ED+++E +L EG V VD D
Sbjct: 745 DKAKDKIAEEGYDPEYGARPLIRAIQKTIEDNLSELILDGNQIEGKKVTVDHD 797
>gi|302553198|ref|ZP_07305540.1| ATP-dependent chaperone ClpB [Streptomyces viridochromogenes DSM
40736]
gi|302470816|gb|EFL33909.1| ATP-dependent chaperone ClpB [Streptomyces viridochromogenes DSM
40736]
Length = 841
Score = 799 bits (2064), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/693 (58%), Positives = 532/693 (76%), Gaps = 16/693 (2%)
Query: 3 GESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRT 62
G+ T A G G S + + L+++G NLT+ A E KLDPV+GR+ +IERV+Q+L RRT
Sbjct: 147 GKETAAAGGPAEGTPSTSLV--LDQFGRNLTQAARESKLDPVIGREKEIERVMQVLSRRT 204
Query: 63 KNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEER 122
KNNP LIGEPGVGKTA+ EGLAQ I G+VP+T++ K + TLD+G LVAG++YRG+FEER
Sbjct: 205 KNNPVLIGEPGVGKTAVVEGLAQAIVKGEVPETLKDKHLYTLDLGALVAGSRYRGDFEER 264
Query: 123 LKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEY 182
LKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEY
Sbjct: 265 LKKVLKEIRTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIGATTLDEY 324
Query: 183 RKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQ 242
RKH+EKD ALERRFQP++V EPS+ TI+ILKGLR+RYE HH++ TDEALV AA L+ +
Sbjct: 325 RKHLEKDAALERRFQPIQVAEPSLPHTIEILKGLRDRYEAHHRVSITDEALVQAATLADR 384
Query: 243 YISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAG 302
YISDRFLPDKAIDLIDEAGSR+R+R P + RE ++++ + ++K A+ QDFEKA
Sbjct: 385 YISDRFLPDKAIDLIDEAGSRMRIRRMTAPPDLREFDEKIAGVRRDKESAIDSQDFEKAA 444
Query: 303 ELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKV 359
LRD+E L A K + E +AGD+ VV EVD I +++ TGIPV K+
Sbjct: 445 SLRDKEKQLLA--------AKAKREKEWKAGDMD-VVAEVDGELIAEVLATATGIPVFKL 495
Query: 360 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 419
+ +ES RLL+ME+ LHKRVIGQ +AVKA+S+AIRR R GLK+P RP SFIF+GP+GVGK
Sbjct: 496 TEEESSRLLRMEDELHKRVIGQVDAVKALSKAIRRTRAGLKDPKRPGGSFIFAGPSGVGK 555
Query: 420 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 479
+EL+KALA + FG E+A+I LDMSEF E+HTVS+L GSPPGYVGY EGGQLTE VRR+P+
Sbjct: 556 TELSKALAEFLFGDEDALISLDMSEFSEKHTVSRLFGSPPGYVGYEEGGQLTEKVRRKPF 615
Query: 480 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 539
+VVLFDE+EKAHPD+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N+G+ I K G
Sbjct: 616 SVVLFDEVEKAHPDIFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNLGTRDISK-GFN 674
Query: 540 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 599
+GF D K S+Y R+K+ V++ELKQ+FRPEFLNR+D+++VF QLT+ ++ I D+M+
Sbjct: 675 LGFAAQGDTK-SNYERMKNKVSDELKQHFRPEFLNRVDDVVVFPQLTQDDILRIVDLMIS 733
Query: 600 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 659
+V +RLK +D+ +++++ +E + ++GY+P GARPLRR I R +EDS++EK+L E++
Sbjct: 734 KVDERLKDRDMGIELSQSAKELLSKKGYDPVLGARPLRRTIQREIEDSLSEKILFGELRP 793
Query: 660 GDSVIVDVDSDGNVTVLNGSSGAPESLADPLPV 692
G V+VD + +G +L D P+
Sbjct: 794 GHIVVVDTEGEGETKTFTFRGEEKAALPDAPPI 826
>gi|418950315|ref|ZP_13502500.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus IS-160]
gi|375377281|gb|EHS80761.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus IS-160]
Length = 818
Score = 799 bits (2063), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/653 (58%), Positives = 511/653 (78%), Gaps = 9/653 (1%)
Query: 16 GSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVG 75
S N PTL+ +LT +A++G LDPV+GR +I RV+++L RRTKNNP LIGEPGVG
Sbjct: 154 ASKSNNTPTLDSLARDLTVIAKDGTLDPVIGRDKEITRVIEVLSRRTKNNPVLIGEPGVG 213
Query: 76 KTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDE 135
KTAIAEGLAQ I + +VP+T++ K+V++LDMG +VAGTKYRGEFEERLKK+MEEI+Q+
Sbjct: 214 KTAIAEGLAQAIVNNEVPETLKDKRVMSLDMGTVVAGTKYRGEFEERLKKVMEEIQQAGN 273
Query: 136 IILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERR 195
+ILFIDE+HTL+GAG AEGAIDA+NILKP+LARGELQCIGATTLDEYRK+IEKD ALERR
Sbjct: 274 VILFIDELHTLVGAGGAEGAIDASNILKPALARGELQCIGATTLDEYRKNIEKDAALERR 333
Query: 196 FQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAID 255
FQPV+V EPSV +T+ ILKGLR+RYE HH++ +DEA+ +A +LS +Y+SDRFLPDKAID
Sbjct: 334 FQPVQVDEPSVVDTVAILKGLRDRYEAHHRINISDEAIEAAVKLSNRYVSDRFLPDKAID 393
Query: 256 LIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQI 315
LIDEA S+VRL+ P +E+E+E+ ++ EK+ AV Q+FE A LRD++ L+ Q
Sbjct: 394 LIDEASSKVRLKSHTTPNNLKEIEQEIEKVKNEKDAAVHAQEFENAANLRDKQTKLEKQY 453
Query: 316 SALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLH 375
++ K + + ++E DI +++ WTGIP+ K++ ES++LL +E+TLH
Sbjct: 454 EEAKNEWKNAQNGMSTS------LSEKDIAEVIAGWTGIPLTKINETESEKLLSLEDTLH 507
Query: 376 KRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEE 435
+RVIGQ +AV +IS+A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+ALA FG ++
Sbjct: 508 ERVIGQKDAVNSISKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGDDD 567
Query: 436 AMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVF 495
AMIR+DMSEFME+H VS+L+G+PPGYVG+ +GGQLTE VRR+PY+V+LFDEIEKAHPDVF
Sbjct: 568 AMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKVRRKPYSVILFDEIEKAHPDVF 627
Query: 496 NMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNR 555
N++LQ+L+DG LTD+KGRTVDF+NT++IMTSNVG+ ++ R GF D +D Y
Sbjct: 628 NILLQVLDDGHLTDTKGRTVDFRNTIIIMTSNVGAQELQD-QRFAGFGGSSDGQD--YET 684
Query: 556 IKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVT 615
I+ + +ELK FRPEFLNR+D++IVF +LTK E+KEI +M+ ++ +RL ++I + VT
Sbjct: 685 IRKTMLKELKNSFRPEFLNRVDDIIVFHKLTKEELKEIVTMMVNKLTNRLSEQNINIIVT 744
Query: 616 ERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVD 668
++ ++++ EEGY+P YGARPL RAI + +ED+++E +L EG V VD D
Sbjct: 745 DKAKDKIAEEGYDPEYGARPLIRAIQKTIEDNLSELILDGNQIEGKKVTVDHD 797
>gi|443625395|ref|ZP_21109840.1| putative ATP-dependent Clp protease [Streptomyces viridochromogenes
Tue57]
gi|443341108|gb|ELS55305.1| putative ATP-dependent Clp protease [Streptomyces viridochromogenes
Tue57]
Length = 841
Score = 799 bits (2063), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/693 (58%), Positives = 533/693 (76%), Gaps = 16/693 (2%)
Query: 3 GESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRT 62
G+ T A G G S + + L+++G NLT+ A E KLDPV+GR+ +IERV+Q+L RRT
Sbjct: 147 GKETAAAGGPAEGTPSTSLV--LDQFGRNLTQAARESKLDPVIGREKEIERVMQVLSRRT 204
Query: 63 KNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEER 122
KNNP LIGEPGVGKTA+ EGLAQ I G+VP+T++ K + TLD+G LVAG++YRG+FEER
Sbjct: 205 KNNPVLIGEPGVGKTAVVEGLAQAIVKGEVPETLKDKHLYTLDLGALVAGSRYRGDFEER 264
Query: 123 LKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEY 182
LKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEY
Sbjct: 265 LKKVLKEIRTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIGATTLDEY 324
Query: 183 RKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQ 242
RKH+EKD ALERRFQP++V EPS+ TI+ILKGLR+RYE HH++ TDEALV AA L+ +
Sbjct: 325 RKHLEKDAALERRFQPIQVAEPSLPHTIEILKGLRDRYEAHHRVSITDEALVQAATLADR 384
Query: 243 YISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAG 302
YISDRFLPDKAIDLIDEAGSR+R+R P + RE ++++ + ++K A+ QDFEKA
Sbjct: 385 YISDRFLPDKAIDLIDEAGSRMRIRRMTAPPDLREFDEKIAGVRRDKESAIDSQDFEKAA 444
Query: 303 ELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKV 359
LRD+E L A K + E +AGD+ VV EVD I +++ TGIPV K+
Sbjct: 445 SLRDKEKQLLA--------AKAKREKEWKAGDM-DVVAEVDGELIAEVLATATGIPVFKL 495
Query: 360 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 419
+ +ES RLL+ME+ LHKRVIGQ++AVKA+S+AIRR R GLK+P RP SFIF+GP+GVGK
Sbjct: 496 TEEESSRLLRMEDELHKRVIGQNDAVKALSKAIRRTRAGLKDPKRPGGSFIFAGPSGVGK 555
Query: 420 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 479
+EL+KALA + FG E+A+I LDMSEF E+HTVS+L GSPPGYVGY EGGQLTE VRR+P+
Sbjct: 556 TELSKALAEFLFGDEDALISLDMSEFSEKHTVSRLFGSPPGYVGYEEGGQLTEKVRRKPF 615
Query: 480 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 539
+VVLFDE+EKAHPD+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N+G+ I K G
Sbjct: 616 SVVLFDEVEKAHPDIFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNLGTRDISK-GFN 674
Query: 540 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 599
+GF D K ++Y R+K+ V++ELKQ+FRPEFLNR+D+++VF QLT+ ++ I D+M+
Sbjct: 675 LGFAASGDTK-TNYERMKNKVSDELKQHFRPEFLNRVDDVVVFPQLTQGDILRIVDLMIG 733
Query: 600 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 659
+V +RLK +D+ +++++ +E + ++GY+P GARPLRR I R +EDS++EK+L E++
Sbjct: 734 KVDERLKDRDMGIELSQSAKELLSKKGYDPVLGARPLRRTIQREIEDSLSEKILFGELRP 793
Query: 660 GDSVIVDVDSDGNVTVLNGSSGAPESLADPLPV 692
G V+VD + +G +L D P+
Sbjct: 794 GHIVVVDTEGEGEAKTFTFRGEEKSALPDVPPI 826
>gi|418637208|ref|ZP_13199533.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
lugdunensis VCU139]
gi|374839348|gb|EHS02862.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
lugdunensis VCU139]
Length = 819
Score = 799 bits (2063), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/652 (59%), Positives = 512/652 (78%), Gaps = 9/652 (1%)
Query: 17 SSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGK 76
+ N PTL+ +LT +A++G LDPV+GR +I RV+++L RRTKNNP LIGEPGVGK
Sbjct: 155 NKSNNTPTLDSLARDLTVIAKDGTLDPVIGRTKEITRVIEVLSRRTKNNPVLIGEPGVGK 214
Query: 77 TAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEI 136
TAIAEGLAQ I + +VP+T++ K+V++LDMG +VAGTKYRGEFEERLKK+MEEI Q+ +
Sbjct: 215 TAIAEGLAQAIINNEVPETLKDKRVMSLDMGTVVAGTKYRGEFEERLKKVMEEIHQAGNV 274
Query: 137 ILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRF 196
ILFIDE+HTL+GAG AEGAIDA+NILKP+LARGELQCIGATTLDEYRK+IEKD ALERRF
Sbjct: 275 ILFIDELHTLVGAGGAEGAIDASNILKPALARGELQCIGATTLDEYRKNIEKDAALERRF 334
Query: 197 QPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDL 256
QPV+V EPSV++TI+ILKGLR+RYE HH++ +D+AL +AA+LS +Y+SDRFLPDKAIDL
Sbjct: 335 QPVQVDEPSVEDTIEILKGLRDRYEAHHRINISDQALDAAAKLSDRYVSDRFLPDKAIDL 394
Query: 257 IDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQIS 316
IDEA S+VRLR P + +E+E+ + KEK+ AV Q+FE A LRD++ L+ Q
Sbjct: 395 IDEASSKVRLRSHTTPTNLKSIEQEIETVKKEKDAAVHAQEFENAANLRDKQSKLEKQYE 454
Query: 317 ALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHK 376
D KE A+ G +++ DI +++ WTGIP+ K++ ESDRLL +E TLH
Sbjct: 455 ---DAKKEWQNAQ---GGSNTELSQEDIAEVIAGWTGIPLTKINETESDRLLNLEATLHG 508
Query: 377 RVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEA 436
RVIGQ++AV +IS+A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+ALA FG E+A
Sbjct: 509 RVIGQNDAVTSISKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAETMFGEEDA 568
Query: 437 MIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFN 496
MIR+DMSEFME+H VS+L+G+PPGYVG+ +GGQLTE VRR+PY+V+LFDEIEKAHPDVFN
Sbjct: 569 MIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKVRRKPYSVILFDEIEKAHPDVFN 628
Query: 497 MMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRI 556
++LQ+L+DG LTD+KGR VDF+NT++IMTSNVG+ ++ R GF + +D Y I
Sbjct: 629 ILLQVLDDGHLTDTKGRRVDFRNTVIIMTSNVGAQELQD-QRFAGFGGASEGQD--YETI 685
Query: 557 KSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTE 616
+ + +ELK FRPEFLNR+D++IVF +L+K E+KEI +++ ++ RL +DI+++VT+
Sbjct: 686 RKTMMKELKNAFRPEFLNRVDDIIVFHKLSKDELKEIVTMIVNKLTQRLSEQDIQIEVTD 745
Query: 617 RFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVD 668
+ +E + EEGY+P YGARPL RAI + +ED+++E +L EG +V +D D
Sbjct: 746 KAKEVIAEEGYDPEYGARPLIRAIQKTVEDNLSELILEGNQIEGKAVTIDHD 797
>gi|15923515|ref|NP_371049.1| endopeptidase [Staphylococcus aureus subsp. aureus Mu50]
gi|15926202|ref|NP_373735.1| endopeptidase [Staphylococcus aureus subsp. aureus N315]
gi|49482754|ref|YP_039978.1| stress response-related Clp ATPase [Staphylococcus aureus subsp.
aureus MRSA252]
gi|49485389|ref|YP_042610.1| stress response-related Clp ATPase [Staphylococcus aureus subsp.
aureus MSSA476]
gi|87161024|ref|YP_493213.1| endopeptidase [Staphylococcus aureus subsp. aureus USA300_FPR3757]
gi|88194286|ref|YP_499078.1| endopeptidase [Staphylococcus aureus subsp. aureus NCTC 8325]
gi|148266984|ref|YP_001245927.1| ATPase [Staphylococcus aureus subsp. aureus JH9]
gi|150393031|ref|YP_001315706.1| ATPase [Staphylococcus aureus subsp. aureus JH1]
gi|151220699|ref|YP_001331521.1| ATP-dependent Clp protease, ATP-binding subunit ClpC
[Staphylococcus aureus subsp. aureus str. Newman]
gi|156978853|ref|YP_001441112.1| endopeptidase [Staphylococcus aureus subsp. aureus Mu3]
gi|161508764|ref|YP_001574423.1| AAA family ATP-binding protein [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|221141039|ref|ZP_03565532.1| AAA family ATP-binding protein [Staphylococcus aureus subsp. aureus
str. JKD6009]
gi|253731128|ref|ZP_04865293.1| ClpB ATPase [Staphylococcus aureus subsp. aureus USA300_TCH959]
gi|253732532|ref|ZP_04866697.1| ClpB ATPase [Staphylococcus aureus subsp. aureus TCH130]
gi|255005318|ref|ZP_05143919.2| endopeptidase [Staphylococcus aureus subsp. aureus Mu50-omega]
gi|257795377|ref|ZP_05644356.1| endopeptidase [Staphylococcus aureus A9781]
gi|258408936|ref|ZP_05681217.1| endopeptidase [Staphylococcus aureus A9763]
gi|258420427|ref|ZP_05683370.1| endopeptidase [Staphylococcus aureus A9719]
gi|258439347|ref|ZP_05690279.1| endopeptidase [Staphylococcus aureus A9299]
gi|258444087|ref|ZP_05692424.1| endopeptidase [Staphylococcus aureus A8115]
gi|258446355|ref|ZP_05694513.1| endopeptidase [Staphylococcus aureus A6300]
gi|258448448|ref|ZP_05696563.1| endopeptidase [Staphylococcus aureus A6224]
gi|258452743|ref|ZP_05700741.1| endopeptidase [Staphylococcus aureus A5948]
gi|258453804|ref|ZP_05701778.1| endopeptidase [Staphylococcus aureus A5937]
gi|269202147|ref|YP_003281416.1| ClpA-related protein [Staphylococcus aureus subsp. aureus ED98]
gi|282894957|ref|ZP_06303180.1| ATP-dependent Clp protease ATP-binding subunit clpC [Staphylococcus
aureus A8117]
gi|282903112|ref|ZP_06311003.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus C160]
gi|282904902|ref|ZP_06312760.1| endopeptidase [Staphylococcus aureus subsp. aureus Btn1260]
gi|282907852|ref|ZP_06315687.1| ATP-dependent chaperone ClpB [Staphylococcus aureus subsp. aureus
WW2703/97]
gi|282910165|ref|ZP_06317969.1| ATP-dependent chaperone ClpB [Staphylococcus aureus subsp. aureus
WBG10049]
gi|282918312|ref|ZP_06326049.1| ATP-dependent Clp protease ATP-binding subunit clpC [Staphylococcus
aureus subsp. aureus C427]
gi|282928860|ref|ZP_06336451.1| ATP-dependent Clp protease ATP-binding subunit clpC [Staphylococcus
aureus A10102]
gi|283957322|ref|ZP_06374775.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus A017934/97]
gi|284023534|ref|ZP_06377932.1| ClpA-related protein [Staphylococcus aureus subsp. aureus 132]
gi|294850300|ref|ZP_06791034.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus A9754]
gi|295406901|ref|ZP_06816704.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus A8819]
gi|295427062|ref|ZP_06819698.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus EMRSA16]
gi|297208762|ref|ZP_06925190.1| ClpC ATPase [Staphylococcus aureus subsp. aureus ATCC 51811]
gi|297246275|ref|ZP_06930124.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus A8796]
gi|297590586|ref|ZP_06949225.1| Clpc ATPase [Staphylococcus aureus subsp. aureus MN8]
gi|304381877|ref|ZP_07364524.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus ATCC BAA-39]
gi|379013806|ref|YP_005290042.1| ClpA-related protein [Staphylococcus aureus subsp. aureus VC40]
gi|379020295|ref|YP_005296957.1| ATP-dependent Clp protease, ATP-binding subunit ClpC
[Staphylococcus aureus subsp. aureus M013]
gi|384549389|ref|YP_005738641.1| Clp protease ATP binding subunit [Staphylococcus aureus subsp.
aureus JKD6159]
gi|384861187|ref|YP_005743907.1| Clp protease ATP binding subunit [Staphylococcus aureus subsp.
aureus str. JKD6008]
gi|384863853|ref|YP_005749212.1| negative regulator of genetic competence clpC/mecB [Staphylococcus
aureus subsp. aureus ECT-R 2]
gi|384868552|ref|YP_005748748.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus TCH60]
gi|384869110|ref|YP_005751824.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus T0131]
gi|385780790|ref|YP_005756961.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus 11819-97]
gi|386728282|ref|YP_006194665.1| hemolysin [Staphylococcus aureus subsp. aureus 71193]
gi|386830168|ref|YP_006236822.1| putative stress response-related Clp ATPase [Staphylococcus aureus
subsp. aureus HO 5096 0412]
gi|387142214|ref|YP_005730607.1| putative stress response-related Clp ATPase [Staphylococcus aureus
subsp. aureus TW20]
gi|387149685|ref|YP_005741249.1| ATP-dependent Clp protease, ATP-binding subunit ClpC / Negative
regulator of genetic competence clcC/mecB
[Staphylococcus aureus 04-02981]
gi|387601879|ref|YP_005733400.1| negative regulator of genetic competence ClpC/mecB [Staphylococcus
aureus subsp. aureus ST398]
gi|387779664|ref|YP_005754462.1| putative stress response-related Clp ATPase [Staphylococcus aureus
subsp. aureus LGA251]
gi|404477910|ref|YP_006709340.1| stress response-related Clp ATPase [Staphylococcus aureus
08BA02176]
gi|415684080|ref|ZP_11449235.1| AAA family ATP-binding protein [Staphylococcus aureus subsp. aureus
CGS00]
gi|415688911|ref|ZP_11452426.1| AAA family ATP-binding protein [Staphylococcus aureus subsp. aureus
CGS01]
gi|415693998|ref|ZP_11455603.1| AAA family ATP-binding protein [Staphylococcus aureus subsp. aureus
CGS03]
gi|417648357|ref|ZP_12298183.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21189]
gi|417650784|ref|ZP_12300549.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21172]
gi|417654130|ref|ZP_12303857.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21193]
gi|417796780|ref|ZP_12443984.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21305]
gi|417798480|ref|ZP_12445646.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21310]
gi|417801347|ref|ZP_12448440.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21318]
gi|417889316|ref|ZP_12533407.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21195]
gi|417893562|ref|ZP_12537588.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21201]
gi|417895979|ref|ZP_12539955.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21235]
gi|417899762|ref|ZP_12543663.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21259]
gi|417902183|ref|ZP_12546052.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21266]
gi|418279368|ref|ZP_12892731.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21178]
gi|418310656|ref|ZP_12922192.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21331]
gi|418312992|ref|ZP_12924490.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21334]
gi|418315148|ref|ZP_12926612.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21340]
gi|418318082|ref|ZP_12929496.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21232]
gi|418320331|ref|ZP_12931692.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus VCU006]
gi|418423697|ref|ZP_12996844.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus VRS1]
gi|418426641|ref|ZP_12999667.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus VRS2]
gi|418429567|ref|ZP_13002498.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus VRS3a]
gi|418432462|ref|ZP_13005262.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus VRS4]
gi|418436176|ref|ZP_13007993.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus VRS5]
gi|418439075|ref|ZP_13010796.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus VRS6]
gi|418442055|ref|ZP_13013672.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus VRS7]
gi|418445183|ref|ZP_13016674.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus VRS8]
gi|418448123|ref|ZP_13019528.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus VRS9]
gi|418450947|ref|ZP_13022289.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus VRS10]
gi|418453964|ref|ZP_13025237.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus VRS11a]
gi|418456868|ref|ZP_13028083.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus VRS11b]
gi|418561558|ref|ZP_13126046.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21262]
gi|418566028|ref|ZP_13130417.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21264]
gi|418566752|ref|ZP_13131120.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21272]
gi|418570503|ref|ZP_13134771.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21283]
gi|418573446|ref|ZP_13137640.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21333]
gi|418581200|ref|ZP_13145283.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG1605]
gi|418595404|ref|ZP_13159018.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21342]
gi|418599346|ref|ZP_13162835.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21343]
gi|418601623|ref|ZP_13165043.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21345]
gi|418639547|ref|ZP_13201792.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus IS-3]
gi|418642050|ref|ZP_13204251.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus IS-24]
gi|418643846|ref|ZP_13206001.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus IS-55]
gi|418646212|ref|ZP_13208323.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus IS-88]
gi|418651241|ref|ZP_13213249.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus IS-91]
gi|418654853|ref|ZP_13216746.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus IS-99]
gi|418656945|ref|ZP_13218729.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus IS-105]
gi|418658745|ref|ZP_13220454.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus IS-111]
gi|418662543|ref|ZP_13224087.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus IS-122]
gi|418874542|ref|ZP_13428808.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIGC93]
gi|418877374|ref|ZP_13431613.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG1165]
gi|418880231|ref|ZP_13434451.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG1213]
gi|418883158|ref|ZP_13437358.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG1769]
gi|418885818|ref|ZP_13439968.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG1150]
gi|418891128|ref|ZP_13445245.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG1176]
gi|418893984|ref|ZP_13448085.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG1057]
gi|418896910|ref|ZP_13450983.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIGC341D]
gi|418899874|ref|ZP_13453933.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG1214]
gi|418905107|ref|ZP_13459136.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIGC345D]
gi|418908279|ref|ZP_13462287.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG149]
gi|418913715|ref|ZP_13467688.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIGC340D]
gi|418916334|ref|ZP_13470297.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG1267]
gi|418919339|ref|ZP_13473285.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIGC348]
gi|418922157|ref|ZP_13476074.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG1233]
gi|418930554|ref|ZP_13484402.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG1750]
gi|418933455|ref|ZP_13487279.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIGC128]
gi|418980365|ref|ZP_13528148.1| Negative regulator of genetic competence clpC/mecB [Staphylococcus
aureus subsp. aureus DR10]
gi|418981392|ref|ZP_13529107.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG1242]
gi|418985025|ref|ZP_13532715.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG1500]
gi|418990419|ref|ZP_13538080.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG1096]
gi|419774829|ref|ZP_14300783.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus CO-23]
gi|419785934|ref|ZP_14311678.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus IS-M]
gi|421149287|ref|ZP_15608945.1| endopeptidase [Staphylococcus aureus subsp. aureus str. Newbould
305]
gi|422744661|ref|ZP_16798616.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus MRSA177]
gi|422745104|ref|ZP_16799050.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus MRSA131]
gi|424775944|ref|ZP_18202931.1| hemolysin B [Staphylococcus aureus subsp. aureus CM05]
gi|424784378|ref|ZP_18211188.1| ATP-dependent Clp protease [Staphylococcus aureus CN79]
gi|440707559|ref|ZP_20888254.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21282]
gi|440733999|ref|ZP_20913612.1| endopeptidase [Staphylococcus aureus subsp. aureus DSM 20231]
gi|443637217|ref|ZP_21121302.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21236]
gi|443638292|ref|ZP_21122339.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21196]
gi|448741467|ref|ZP_21723431.1| endopeptidase [Staphylococcus aureus KT/314250]
gi|81649908|sp|Q6GBW3.1|CLPC_STAAS RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpC
gi|81651703|sp|Q6GJE4.1|CLPC_STAAR RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpC
gi|81706177|sp|Q7A797.1|CLPC_STAAN RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpC
gi|81782085|sp|Q99W78.1|CLPC_STAAM RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpC
gi|122063320|sp|Q2FJB5.1|CLPC_STAA3 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpC
gi|122063321|sp|Q2G0P5.1|CLPC_STAA8 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpC
gi|122063323|sp|P0C281.1|CLPC_STAAC RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpC
gi|13700415|dbj|BAB41713.1| endopeptidase [Staphylococcus aureus subsp. aureus N315]
gi|14246293|dbj|BAB56687.1| endopeptidase [Staphylococcus aureus subsp. aureus Mu50]
gi|49240883|emb|CAG39550.1| putative stress response-related Clp ATPase [Staphylococcus aureus
subsp. aureus MRSA252]
gi|49243832|emb|CAG42257.1| putative stress response-related Clp ATPase [Staphylococcus aureus
subsp. aureus MSSA476]
gi|87126998|gb|ABD21512.1| endopeptidase [Staphylococcus aureus subsp. aureus USA300_FPR3757]
gi|87201844|gb|ABD29654.1| endopeptidase, putative [Staphylococcus aureus subsp. aureus NCTC
8325]
gi|147740053|gb|ABQ48351.1| ATPase AAA-2 domain protein [Staphylococcus aureus subsp. aureus
JH9]
gi|149945483|gb|ABR51419.1| ATPase AAA-2 domain protein [Staphylococcus aureus subsp. aureus
JH1]
gi|150373499|dbj|BAF66759.1| ATP-dependent Clp protease, ATP-binding subunit ClpC
[Staphylococcus aureus subsp. aureus str. Newman]
gi|156720988|dbj|BAF77405.1| endopeptidase [Staphylococcus aureus subsp. aureus Mu3]
gi|160367573|gb|ABX28544.1| AAA family ATP-binding protein [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|253725142|gb|EES93871.1| ClpB ATPase [Staphylococcus aureus subsp. aureus USA300_TCH959]
gi|253729461|gb|EES98190.1| ClpB ATPase [Staphylococcus aureus subsp. aureus TCH130]
gi|257789349|gb|EEV27689.1| endopeptidase [Staphylococcus aureus A9781]
gi|257840287|gb|EEV64750.1| endopeptidase [Staphylococcus aureus A9763]
gi|257843617|gb|EEV68023.1| endopeptidase [Staphylococcus aureus A9719]
gi|257847684|gb|EEV71683.1| endopeptidase [Staphylococcus aureus A9299]
gi|257850757|gb|EEV74702.1| endopeptidase [Staphylococcus aureus A8115]
gi|257854949|gb|EEV77894.1| endopeptidase [Staphylococcus aureus A6300]
gi|257858317|gb|EEV81204.1| endopeptidase [Staphylococcus aureus A6224]
gi|257859616|gb|EEV82466.1| endopeptidase [Staphylococcus aureus A5948]
gi|257864060|gb|EEV86814.1| endopeptidase [Staphylococcus aureus A5937]
gi|262074437|gb|ACY10410.1| ClpA-related protein [Staphylococcus aureus subsp. aureus ED98]
gi|269940097|emb|CBI48473.1| putative stress response-related Clp ATPase [Staphylococcus aureus
subsp. aureus TW20]
gi|282317446|gb|EFB47818.1| ATP-dependent Clp protease ATP-binding subunit clpC [Staphylococcus
aureus subsp. aureus C427]
gi|282325557|gb|EFB55865.1| ATP-dependent chaperone ClpB [Staphylococcus aureus subsp. aureus
WBG10049]
gi|282328236|gb|EFB58514.1| ATP-dependent chaperone ClpB [Staphylococcus aureus subsp. aureus
WW2703/97]
gi|282331727|gb|EFB61238.1| endopeptidase [Staphylococcus aureus subsp. aureus Btn1260]
gi|282589468|gb|EFB94557.1| ATP-dependent Clp protease ATP-binding subunit clpC [Staphylococcus
aureus A10102]
gi|282596067|gb|EFC01028.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus C160]
gi|282762639|gb|EFC02776.1| ATP-dependent Clp protease ATP-binding subunit clpC [Staphylococcus
aureus A8117]
gi|283469817|emb|CAQ49028.1| negative regulator of genetic competence ClpC/mecB [Staphylococcus
aureus subsp. aureus ST398]
gi|283790773|gb|EFC29588.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus A017934/97]
gi|285816224|gb|ADC36711.1| ATP-dependent Clp protease, ATP-binding subunit ClpC / Negative
regulator of genetic competence clcC/mecB
[Staphylococcus aureus 04-02981]
gi|294822812|gb|EFG39247.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus A9754]
gi|294968132|gb|EFG44158.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus A8819]
gi|295128850|gb|EFG58480.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus EMRSA16]
gi|296886707|gb|EFH25612.1| ClpC ATPase [Staphylococcus aureus subsp. aureus ATCC 51811]
gi|297176873|gb|EFH36131.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus A8796]
gi|297576885|gb|EFH95600.1| Clpc ATPase [Staphylococcus aureus subsp. aureus MN8]
gi|302332238|gb|ADL22431.1| Clp protease ATP binding subunit [Staphylococcus aureus subsp.
aureus JKD6159]
gi|302750416|gb|ADL64593.1| Clp protease ATP binding subunit [Staphylococcus aureus subsp.
aureus str. JKD6008]
gi|304339663|gb|EFM05610.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus ATCC BAA-39]
gi|312439057|gb|ADQ78128.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus TCH60]
gi|312829020|emb|CBX33862.1| negative regulator of genetic competence clpC/mecB [Staphylococcus
aureus subsp. aureus ECT-R 2]
gi|315128816|gb|EFT84815.1| AAA family ATP-binding protein [Staphylococcus aureus subsp. aureus
CGS03]
gi|315193888|gb|EFU24282.1| AAA family ATP-binding protein [Staphylococcus aureus subsp. aureus
CGS00]
gi|315196665|gb|EFU27012.1| AAA family ATP-binding protein [Staphylococcus aureus subsp. aureus
CGS01]
gi|320141611|gb|EFW33450.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus MRSA131]
gi|320141761|gb|EFW33589.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus MRSA177]
gi|329313245|gb|AEB87658.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus T0131]
gi|329727906|gb|EGG64355.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21172]
gi|329731020|gb|EGG67393.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21189]
gi|329731944|gb|EGG68300.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21193]
gi|334268166|gb|EGL86611.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21305]
gi|334275810|gb|EGL94085.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21310]
gi|334276873|gb|EGL95116.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21318]
gi|341841185|gb|EGS82648.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21235]
gi|341843778|gb|EGS84999.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21266]
gi|341844370|gb|EGS85587.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21259]
gi|341851726|gb|EGS92637.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21195]
gi|341854333|gb|EGS95204.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21201]
gi|344176766|emb|CCC87228.1| putative stress response-related Clp ATPase [Staphylococcus aureus
subsp. aureus LGA251]
gi|359829604|gb|AEV77582.1| ATP-dependent Clp protease, ATP-binding subunit ClpC
[Staphylococcus aureus subsp. aureus M013]
gi|364521779|gb|AEW64529.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus 11819-97]
gi|365170702|gb|EHM61663.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21178]
gi|365227517|gb|EHM68711.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus VCU006]
gi|365236360|gb|EHM77256.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21331]
gi|365236933|gb|EHM77809.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21334]
gi|365243778|gb|EHM84446.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21340]
gi|365244323|gb|EHM84984.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21232]
gi|371971902|gb|EHO89294.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21264]
gi|371977415|gb|EHO94686.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21262]
gi|371981811|gb|EHO98973.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21333]
gi|371983497|gb|EHP00639.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21272]
gi|371984012|gb|EHP01140.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21283]
gi|374362503|gb|AEZ36608.1| ClpA-related protein [Staphylococcus aureus subsp. aureus VC40]
gi|374397453|gb|EHQ68663.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21343]
gi|374398042|gb|EHQ69240.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21345]
gi|374401543|gb|EHQ72609.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21342]
gi|375014250|gb|EHS07942.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus IS-99]
gi|375017187|gb|EHS10809.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus IS-3]
gi|375017827|gb|EHS11430.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus IS-24]
gi|375026147|gb|EHS19533.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus IS-91]
gi|375027272|gb|EHS20637.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus IS-55]
gi|375031945|gb|EHS25205.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus IS-105]
gi|375033412|gb|EHS26605.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus IS-88]
gi|375036042|gb|EHS29129.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus IS-122]
gi|375037645|gb|EHS30664.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus IS-111]
gi|377696082|gb|EHT20438.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG1165]
gi|377698332|gb|EHT22680.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG1057]
gi|377704956|gb|EHT29264.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG1214]
gi|377707212|gb|EHT31505.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG1242]
gi|377708157|gb|EHT32448.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG1500]
gi|377711984|gb|EHT36207.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG1605]
gi|377716271|gb|EHT40454.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG1769]
gi|377716421|gb|EHT40603.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG1750]
gi|377722541|gb|EHT46666.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG1096]
gi|377727116|gb|EHT51223.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG1150]
gi|377732085|gb|EHT56136.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG1176]
gi|377732669|gb|EHT56719.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG1213]
gi|377735480|gb|EHT59510.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG1233]
gi|377751686|gb|EHT75614.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG1267]
gi|377755618|gb|EHT79516.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG149]
gi|377758321|gb|EHT82206.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIGC340D]
gi|377761689|gb|EHT85558.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIGC341D]
gi|377766647|gb|EHT90480.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIGC345D]
gi|377767304|gb|EHT91102.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIGC348]
gi|377771235|gb|EHT94989.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIGC128]
gi|377771882|gb|EHT95635.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIGC93]
gi|379991893|gb|EIA13355.1| Negative regulator of genetic competence clpC/mecB [Staphylococcus
aureus subsp. aureus DR10]
gi|383361743|gb|EID39109.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus IS-M]
gi|383971330|gb|EID87408.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus CO-23]
gi|384229575|gb|AFH68822.1| Negative regulator of genetic competence clpC/mecB [Staphylococcus
aureus subsp. aureus 71193]
gi|385195560|emb|CCG15169.1| putative stress response-related Clp ATPase [Staphylococcus aureus
subsp. aureus HO 5096 0412]
gi|387720914|gb|EIK08805.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus VRS3a]
gi|387721079|gb|EIK08966.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus VRS2]
gi|387722489|gb|EIK10287.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus VRS1]
gi|387727528|gb|EIK15041.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus VRS4]
gi|387729536|gb|EIK16971.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus VRS5]
gi|387731576|gb|EIK18858.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus VRS6]
gi|387738379|gb|EIK25422.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus VRS8]
gi|387739630|gb|EIK26626.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus VRS9]
gi|387739792|gb|EIK26775.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus VRS7]
gi|387746895|gb|EIK33615.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus VRS10]
gi|387748305|gb|EIK34994.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus VRS11a]
gi|387749110|gb|EIK35754.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus VRS11b]
gi|394330204|gb|EJE56296.1| endopeptidase [Staphylococcus aureus subsp. aureus str. Newbould
305]
gi|402346723|gb|EJU81800.1| hemolysin B [Staphylococcus aureus subsp. aureus CM05]
gi|404439399|gb|AFR72592.1| putative stress response-related Clp ATPase [Staphylococcus aureus
08BA02176]
gi|408422956|emb|CCJ10367.1| Clp protease ATP binding subunit [Staphylococcus aureus subsp.
aureus ST228]
gi|408424944|emb|CCJ12331.1| Clp protease ATP binding subunit [Staphylococcus aureus subsp.
aureus ST228]
gi|408426933|emb|CCJ14296.1| Clp protease ATP binding subunit [Staphylococcus aureus subsp.
aureus ST228]
gi|408428921|emb|CCJ26086.1| Clp protease ATP binding subunit [Staphylococcus aureus subsp.
aureus ST228]
gi|408430909|emb|CCJ18224.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus ST228]
gi|408432903|emb|CCJ20188.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus ST228]
gi|408434892|emb|CCJ22152.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus ST228]
gi|408436877|emb|CCJ24120.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus ST228]
gi|421956977|gb|EKU09301.1| ATP-dependent Clp protease [Staphylococcus aureus CN79]
gi|436431894|gb|ELP29246.1| endopeptidase [Staphylococcus aureus subsp. aureus DSM 20231]
gi|436505881|gb|ELP41740.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21282]
gi|443406095|gb|ELS64680.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21236]
gi|443409729|gb|ELS68221.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21196]
gi|445547768|gb|ELY16030.1| endopeptidase [Staphylococcus aureus KT/314250]
Length = 818
Score = 799 bits (2063), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/653 (58%), Positives = 511/653 (78%), Gaps = 9/653 (1%)
Query: 16 GSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVG 75
S N PTL+ +LT +A++G LDPV+GR +I RV+++L RRTKNNP LIGEPGVG
Sbjct: 154 ASKSNNTPTLDSLARDLTVIAKDGTLDPVIGRDKEITRVIEVLSRRTKNNPVLIGEPGVG 213
Query: 76 KTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDE 135
KTAIAEGLAQ I + +VP+T++ K+V++LDMG +VAGTKYRGEFEERLKK+MEEI+Q+
Sbjct: 214 KTAIAEGLAQAIVNNEVPETLKDKRVMSLDMGTVVAGTKYRGEFEERLKKVMEEIQQAGN 273
Query: 136 IILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERR 195
+ILFIDE+HTL+GAG AEGAIDA+NILKP+LARGELQCIGATTLDEYRK+IEKD ALERR
Sbjct: 274 VILFIDELHTLVGAGGAEGAIDASNILKPALARGELQCIGATTLDEYRKNIEKDAALERR 333
Query: 196 FQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAID 255
FQPV+V EPSV +T+ ILKGLR+RYE HH++ +DEA+ +A +LS +Y+SDRFLPDKAID
Sbjct: 334 FQPVQVDEPSVVDTVAILKGLRDRYEAHHRINISDEAIEAAVKLSNRYVSDRFLPDKAID 393
Query: 256 LIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQI 315
LIDEA S+VRL+ P +E+E+E+ ++ EK+ AV Q+FE A LRD++ L+ Q
Sbjct: 394 LIDEASSKVRLKSHTTPNNLKEIEQEIEKVKNEKDAAVHAQEFENAANLRDKQTKLEKQY 453
Query: 316 SALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLH 375
++ K + + ++E DI +++ WTGIP+ K++ ES++LL +E+TLH
Sbjct: 454 EEAKNEWKNAQNGMSTS------LSEEDIAEVIAGWTGIPLTKINETESEKLLSLEDTLH 507
Query: 376 KRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEE 435
+RVIGQ +AV +IS+A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+ALA FG ++
Sbjct: 508 ERVIGQKDAVNSISKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGDDD 567
Query: 436 AMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVF 495
AMIR+DMSEFME+H VS+L+G+PPGYVG+ +GGQLTE VRR+PY+V+LFDEIEKAHPDVF
Sbjct: 568 AMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKVRRKPYSVILFDEIEKAHPDVF 627
Query: 496 NMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNR 555
N++LQ+L+DG LTD+KGRTVDF+NT++IMTSNVG+ ++ R GF D +D Y
Sbjct: 628 NILLQVLDDGHLTDTKGRTVDFRNTIIIMTSNVGAQELQD-QRFAGFGGSSDGQD--YET 684
Query: 556 IKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVT 615
I+ + +ELK FRPEFLNR+D++IVF +LTK E+KEI +M+ ++ +RL ++I + VT
Sbjct: 685 IRKTMLKELKNSFRPEFLNRVDDIIVFHKLTKEELKEIVTMMVNKLTNRLSEQNINIIVT 744
Query: 616 ERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVD 668
++ ++++ EEGY+P YGARPL RAI + +ED+++E +L EG V VD D
Sbjct: 745 DKAKDKIAEEGYDPEYGARPLIRAIQKTIEDNLSELILDGNQIEGKKVTVDHD 797
>gi|314937170|ref|ZP_07844517.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
hominis subsp. hominis C80]
gi|313655789|gb|EFS19534.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
hominis subsp. hominis C80]
Length = 823
Score = 799 bits (2063), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/657 (58%), Positives = 511/657 (77%), Gaps = 11/657 (1%)
Query: 16 GSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVG 75
+ N PTL+ +LT +A++G LDPVVGR +I RV+++L RRTKNNP LIGEPGVG
Sbjct: 154 ANKSNNTPTLDGLARDLTVIAKDGTLDPVVGRDKEITRVIEVLSRRTKNNPVLIGEPGVG 213
Query: 76 KTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDE 135
KTAIAEGLAQ I + +VP+T++ K+V++LDMG +VAGTKYRGEFEERLKK+M+EI +
Sbjct: 214 KTAIAEGLAQAIVNNEVPETLKNKRVMSLDMGTVVAGTKYRGEFEERLKKVMDEIHHAGN 273
Query: 136 IILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERR 195
+ILFIDE+HTL+GAG AEGAIDA+NILKP+LARGELQCIGATTLDEYRK+IEKD ALERR
Sbjct: 274 VILFIDELHTLVGAGGAEGAIDASNILKPALARGELQCIGATTLDEYRKNIEKDAALERR 333
Query: 196 FQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAID 255
FQP++V EPSV++T+ ILKGLR+RYE HH++ +DEAL +AA+LS +Y+SDRFLPDKAID
Sbjct: 334 FQPIQVDEPSVEDTVAILKGLRDRYEAHHRINISDEALEAAAKLSNRYVSDRFLPDKAID 393
Query: 256 LIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQI 315
LIDEA S+VRL+ P +E+E+E+ ++ EK+ AV Q+FE A LRD++ L+ Q
Sbjct: 394 LIDEASSKVRLKSHTTPSNLKEIEQEIEKVKNEKDAAVHAQEFENAANLRDKQSKLEKQY 453
Query: 316 SALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLH 375
++ K T G +++ DI +++ WTGIP+ +++ ESDRLL +EETLH
Sbjct: 454 EDAKNEWK------TSQGGQSTSLSKEDIAEVIAGWTGIPLTRINETESDRLLNLEETLH 507
Query: 376 KRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEE 435
RVIGQ++AV +IS+A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+ALA FG E+
Sbjct: 508 DRVIGQNDAVTSISKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGEED 567
Query: 436 AMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVF 495
AMIR+DMSEFME+H VS+L+G+PPGYVG+ +GGQLTE VRR+PY+V+LFDEIEKAHPDVF
Sbjct: 568 AMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKVRRKPYSVILFDEIEKAHPDVF 627
Query: 496 NMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNR 555
N++LQ+L+DG LTD+KGR VDF+NT++IMTSNVG+ ++ R GF + +D Y
Sbjct: 628 NILLQVLDDGHLTDTKGRQVDFRNTVIIMTSNVGAQELQD-QRFAGFGGASEGQD--YET 684
Query: 556 IKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVT 615
I+ + +ELK FRPEFLNR+D++IVF +LTK E+KEI +M+ ++ RL +DI + VT
Sbjct: 685 IRKTMMKELKNSFRPEFLNRVDDIIVFHKLTKDELKEIVTMMVNKLTKRLSEQDINIVVT 744
Query: 616 ERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGN 672
++ +E++ EEGY+P YGARPL RAI + +ED+++E +L EG V +D DGN
Sbjct: 745 DKAKEKIAEEGYDPEYGARPLIRAIQKTVEDNLSELILDGNQIEGKEVT--IDHDGN 799
>gi|257424638|ref|ZP_05601065.1| endopeptidase [Staphylococcus aureus subsp. aureus 55/2053]
gi|257427306|ref|ZP_05603705.1| endopeptidase [Staphylococcus aureus subsp. aureus 65-1322]
gi|257429942|ref|ZP_05606326.1| endopeptidase [Staphylococcus aureus subsp. aureus 68-397]
gi|257435548|ref|ZP_05611596.1| ATPase AAA-2 domain-containing protein [Staphylococcus aureus
subsp. aureus M876]
gi|282913357|ref|ZP_06321146.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus M899]
gi|282923274|ref|ZP_06330954.1| ATP-dependent Clp protease ATP-binding subunit clpC [Staphylococcus
aureus subsp. aureus C101]
gi|293500403|ref|ZP_06666254.1| ATP-dependent Clp protease ATP-binding subunit clpC [Staphylococcus
aureus subsp. aureus 58-424]
gi|293509348|ref|ZP_06668059.1| ATP-dependent Clp protease ATP-binding subunit clpC [Staphylococcus
aureus subsp. aureus M809]
gi|293523935|ref|ZP_06670622.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus M1015]
gi|257272208|gb|EEV04331.1| endopeptidase [Staphylococcus aureus subsp. aureus 55/2053]
gi|257275499|gb|EEV06972.1| endopeptidase [Staphylococcus aureus subsp. aureus 65-1322]
gi|257279139|gb|EEV09740.1| endopeptidase [Staphylococcus aureus subsp. aureus 68-397]
gi|257284739|gb|EEV14858.1| ATPase AAA-2 domain-containing protein [Staphylococcus aureus
subsp. aureus M876]
gi|282314142|gb|EFB44532.1| ATP-dependent Clp protease ATP-binding subunit clpC [Staphylococcus
aureus subsp. aureus C101]
gi|282322389|gb|EFB52711.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus M899]
gi|290920898|gb|EFD97959.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus M1015]
gi|291095408|gb|EFE25669.1| ATP-dependent Clp protease ATP-binding subunit clpC [Staphylococcus
aureus subsp. aureus 58-424]
gi|291467445|gb|EFF09960.1| ATP-dependent Clp protease ATP-binding subunit clpC [Staphylococcus
aureus subsp. aureus M809]
Length = 818
Score = 799 bits (2063), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/653 (58%), Positives = 511/653 (78%), Gaps = 9/653 (1%)
Query: 16 GSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVG 75
S N PTL+ +LT +A++G LDPV+GR +I RV+++L RRTKNNP LIGEPGVG
Sbjct: 154 ASKSNNTPTLDSLARDLTVIAKDGTLDPVIGRDKEITRVIEVLSRRTKNNPVLIGEPGVG 213
Query: 76 KTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDE 135
KTAIAEGLAQ I + +VP+T++ K+V++LDMG +VAGTKYRGEFEERLKK+MEEI+Q+
Sbjct: 214 KTAIAEGLAQAIVNNEVPETLKDKRVMSLDMGTVVAGTKYRGEFEERLKKVMEEIQQAGN 273
Query: 136 IILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERR 195
+ILFIDE+HTL+GAG AEGAIDA+NILKP+LARGELQCIGATTLDEYRK+IEKD ALERR
Sbjct: 274 VILFIDELHTLVGAGGAEGAIDASNILKPALARGELQCIGATTLDEYRKNIEKDAALERR 333
Query: 196 FQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAID 255
FQPV+V EPSV +T+ ILKGLR+RYE HH++ +DEA+ +A +LS +Y+SDRFLPDKAID
Sbjct: 334 FQPVQVDEPSVVDTVAILKGLRDRYEAHHRINISDEAIEAAVKLSNRYVSDRFLPDKAID 393
Query: 256 LIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQI 315
LIDEA S+VRL+ P +E+E+E+ ++ EK+ AV Q+FE A LRD++ L+ Q
Sbjct: 394 LIDEASSKVRLKSHTTPNNLKEIEQEIEKVKNEKDAAVHAQEFENAANLRDKQTKLEKQY 453
Query: 316 SALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLH 375
++ K + + ++E DI +++ WTGIP+ K++ ES++LL +E+TLH
Sbjct: 454 EEAKNEWKNAQNGMSTS------LSEEDIAEVIAGWTGIPLTKINETESEKLLSLEDTLH 507
Query: 376 KRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEE 435
+RVIGQ +AV +IS+A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+ALA FG ++
Sbjct: 508 ERVIGQKDAVNSISKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGDDD 567
Query: 436 AMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVF 495
AMIR+DMSEFME+H VS+L+G+PPGYVG+ +GGQLTE VRR+PY+V+LFDEIEKAHPDVF
Sbjct: 568 AMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKVRRKPYSVILFDEIEKAHPDVF 627
Query: 496 NMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNR 555
N++LQ+L+DG LTD+KGRTVDF+NT++IMTSNVG+ ++ R GF D +D Y
Sbjct: 628 NILLQVLDDGHLTDTKGRTVDFRNTIIIMTSNVGAQELQD-QRFAGFGGSSDGQD--YET 684
Query: 556 IKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVT 615
I+ + +ELK FRPEFLNR+D++IVF +LTK E+KEI +M+ ++ +RL ++I + VT
Sbjct: 685 IRKTMLKELKNSFRPEFLNRVDDIIVFHKLTKEELKEIVTMMVNKLTNRLSEQNINIIVT 744
Query: 616 ERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVD 668
++ ++++ EEGY+P YGARPL RAI + +ED+++E +L EG V VD D
Sbjct: 745 DKAKDKIAEEGYDPEYGARPLIRAIQKTIEDNLSELILDGNQIEGKKVTVDHD 797
>gi|383651370|ref|ZP_09961776.1| ATP-dependent Clp protease [Streptomyces chartreusis NRRL 12338]
Length = 841
Score = 799 bits (2063), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/687 (58%), Positives = 529/687 (77%), Gaps = 16/687 (2%)
Query: 11 AGVGGGSSGNKMPTL--EEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCL 68
A GG + G +L +++G NLT+ A E KLDPV+GR+ +IERV+Q+L RRTKNNP L
Sbjct: 151 ATAGGPAEGTPSTSLVLDQFGRNLTQAARESKLDPVIGREKEIERVMQVLSRRTKNNPVL 210
Query: 69 IGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLME 128
IGEPGVGKTA+ EGLAQ I G+VP+T++ K + TLD+G LVAG++YRG+FEERLKK+++
Sbjct: 211 IGEPGVGKTAVVEGLAQAIVKGEVPETLKDKHLYTLDLGALVAGSRYRGDFEERLKKVLK 270
Query: 129 EIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEK 188
EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEYRKH+EK
Sbjct: 271 EIRTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIGATTLDEYRKHLEK 330
Query: 189 DPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRF 248
D ALERRFQP++V EPS+ TI+ILKGLR+RYE HH++ TDEALV AA L+ +YISDRF
Sbjct: 331 DAALERRFQPIQVAEPSLPHTIEILKGLRDRYEAHHRVSITDEALVQAATLADRYISDRF 390
Query: 249 LPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDRE 308
LPDKAIDLIDEAGSR+R+R P + RE ++++ + ++K A+ QDFEKA LRD+E
Sbjct: 391 LPDKAIDLIDEAGSRMRIRRMTAPPDLREFDEKIAGVRRDKESAIDSQDFEKAASLRDKE 450
Query: 309 MDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKVSTDESD 365
L A K + E +AGD+ VV EVD I +++ TGIPV K++ +ES
Sbjct: 451 KQLLA--------AKAKREKEWKAGDMD-VVAEVDGELIAEVLATATGIPVFKLTEEESS 501
Query: 366 RLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKA 425
RLL+ME+ LHKRVIGQ++AVKA+S+AIRR R GLK+P RP SFIF+GP+GVGK+EL+KA
Sbjct: 502 RLLRMEDELHKRVIGQNDAVKALSKAIRRTRAGLKDPKRPGGSFIFAGPSGVGKTELSKA 561
Query: 426 LAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFD 485
LA + FG E+A+I LDMSEF E+HTVS+L GSPPGYVGY EGGQLTE VRR+P++VVLFD
Sbjct: 562 LAEFLFGDEDALISLDMSEFSEKHTVSRLFGSPPGYVGYEEGGQLTEKVRRKPFSVVLFD 621
Query: 486 EIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLD 545
E+EKAHPD+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N+G+ I K G +GF
Sbjct: 622 EVEKAHPDIFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNLGTRDISK-GFNLGFAAS 680
Query: 546 YDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRL 605
D K ++Y R+K+ V++ELKQ+FRPEFLNR+D+++VF QLT+ ++ I D+M+ +V +RL
Sbjct: 681 GDTK-TNYERMKNKVSDELKQHFRPEFLNRVDDVVVFPQLTQDDILRIVDLMISKVDERL 739
Query: 606 KTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIV 665
K +D+ +++ + +E + ++GY+P GARPLRR I R +EDS++EK+L E++ G V+V
Sbjct: 740 KDRDMGIELAQSAKELLAKKGYDPVMGARPLRRTIQREIEDSLSEKILFGELRPGHIVVV 799
Query: 666 DVDSDGNVTVLNGSSGAPESLADPLPV 692
D + +G +L D P+
Sbjct: 800 DTEGEGETKTFTFRGEEKSALPDVPPI 826
>gi|282924437|ref|ZP_06332109.1| ATP-dependent Clp protease ATP-binding subunit clpC [Staphylococcus
aureus A9765]
gi|418911193|ref|ZP_13465176.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG547]
gi|418927840|ref|ZP_13481726.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG1612]
gi|282592848|gb|EFB97852.1| ATP-dependent Clp protease ATP-binding subunit clpC [Staphylococcus
aureus A9765]
gi|377724571|gb|EHT48686.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG547]
gi|377737752|gb|EHT61761.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG1612]
Length = 818
Score = 799 bits (2063), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/653 (58%), Positives = 511/653 (78%), Gaps = 9/653 (1%)
Query: 16 GSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVG 75
S N PTL+ +LT +A++G LDPV+GR +I RV+++L RRTKNNP LIGEPGVG
Sbjct: 154 ASKSNNTPTLDSLARDLTVIAKDGTLDPVIGRDKEITRVIEVLSRRTKNNPVLIGEPGVG 213
Query: 76 KTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDE 135
KTAIAEGLAQ I + +VP+T++ K+V++LDMG +VAGTKYRGEFEERLKK+MEEI+Q+
Sbjct: 214 KTAIAEGLAQAIVNNEVPETLKDKRVMSLDMGTVVAGTKYRGEFEERLKKVMEEIQQAGN 273
Query: 136 IILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERR 195
+ILFIDE+HTL+GAG AEGAIDA+NILKP+LARGELQCIGATTLDEYRK+IEKD ALERR
Sbjct: 274 VILFIDELHTLVGAGGAEGAIDASNILKPALARGELQCIGATTLDEYRKNIEKDAALERR 333
Query: 196 FQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAID 255
FQPV+V EPSV +T+ ILKGLR+RYE HH++ +DEA+ +A +LS +Y+SDRFLPDKAID
Sbjct: 334 FQPVQVDEPSVVDTVAILKGLRDRYEAHHRINISDEAIEAAVKLSNRYVSDRFLPDKAID 393
Query: 256 LIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQI 315
LIDEA S+VRL+ P +E+E+E+ ++ EK+ AV Q+FE A LRD++ L+ Q
Sbjct: 394 LIDEASSKVRLKSHTTPNNLKEIEQEIEKVKNEKDAAVHAQEFENAANLRDKQTKLEKQY 453
Query: 316 SALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLH 375
++ K + + ++E DI +++ WTGIP+ K++ ES++LL +E+TLH
Sbjct: 454 EEAKNEWKNAQNGMSTS------LSEEDIAEVIAGWTGIPLTKINETESEKLLSLEDTLH 507
Query: 376 KRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEE 435
+RVIGQ +AV +IS+A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+ALA FG ++
Sbjct: 508 ERVIGQKDAVNSISKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGDDD 567
Query: 436 AMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVF 495
AMIR+DMSEFME+H VS+L+G+PPGYVG+ +GGQLTE VRR+PY+V+LFDEIEKAHPDVF
Sbjct: 568 AMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKVRRKPYSVILFDEIEKAHPDVF 627
Query: 496 NMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNR 555
N++LQ+L+DG LTD+KGRTVDF+NT++IMTSNVG+ ++ R GF D +D Y
Sbjct: 628 NILLQVLDDGHLTDTKGRTVDFRNTIIIMTSNVGAQELQD-QRFAGFGGSSDGQD--YET 684
Query: 556 IKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVT 615
I+ + +ELK FRPEFLNR+D++IVF +LTK E+KEI +M+ ++ +RL ++I + VT
Sbjct: 685 IRKTMLKELKNSFRPEFLNRVDDIIVFHKLTKEELKEIVTMMVNKLTNRLSEQNINIIVT 744
Query: 616 ERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVD 668
++ ++++ EEGY+P YGARPL RAI + +ED+++E +L EG V VD D
Sbjct: 745 DKAKDKIAEEGYDPEYGARPLIRAIQKTIEDNLSELILDGNQIEGKKVTVDHD 797
>gi|418578415|ref|ZP_13142510.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG1114]
gi|418902788|ref|ZP_13456829.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG1770]
gi|377696442|gb|EHT20797.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG1114]
gi|377741803|gb|EHT65788.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG1770]
Length = 818
Score = 798 bits (2062), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/653 (58%), Positives = 511/653 (78%), Gaps = 9/653 (1%)
Query: 16 GSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVG 75
S N PTL+ +LT +A++G LDPV+GR +I RV+++L RRTKNNP LIGEPGVG
Sbjct: 154 ASKSNNTPTLDSLARDLTVIAKDGTLDPVIGRDKEITRVIEVLSRRTKNNPVLIGEPGVG 213
Query: 76 KTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDE 135
KTAIAEGLAQ I + +VP+T++ K+V++LDMG +VAGTKYRGEFEERLKK+MEEI+Q+
Sbjct: 214 KTAIAEGLAQAIVNNEVPETLKDKRVMSLDMGTVVAGTKYRGEFEERLKKVMEEIQQAGN 273
Query: 136 IILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERR 195
+ILFIDE+HTL+GAG AEGAIDA+NILKP+LARGELQCIGATTLDEYRK+IEKD ALERR
Sbjct: 274 VILFIDELHTLVGAGGAEGAIDASNILKPTLARGELQCIGATTLDEYRKNIEKDAALERR 333
Query: 196 FQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAID 255
FQPV+V EPSV +T+ ILKGLR+RYE HH++ +DEA+ +A +LS +Y+SDRFLPDKAID
Sbjct: 334 FQPVQVDEPSVVDTVAILKGLRDRYEAHHRINISDEAIEAAVKLSNRYVSDRFLPDKAID 393
Query: 256 LIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQI 315
LIDEA S+VRL+ P +E+E+E+ ++ EK+ AV Q+FE A LRD++ L+ Q
Sbjct: 394 LIDEASSKVRLKSHTTPNNLKEIEQEIEKVKNEKDAAVHAQEFENAANLRDKQTKLEKQY 453
Query: 316 SALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLH 375
++ K + + ++E DI +++ WTGIP+ K++ ES++LL +E+TLH
Sbjct: 454 EEAKNEWKNAQNGMSTS------LSEEDIAEVIAGWTGIPLTKINETESEKLLSLEDTLH 507
Query: 376 KRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEE 435
+RVIGQ +AV +IS+A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+ALA FG ++
Sbjct: 508 ERVIGQKDAVNSISKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGDDD 567
Query: 436 AMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVF 495
AMIR+DMSEFME+H VS+L+G+PPGYVG+ +GGQLTE VRR+PY+V+LFDEIEKAHPDVF
Sbjct: 568 AMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKVRRKPYSVILFDEIEKAHPDVF 627
Query: 496 NMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNR 555
N++LQ+L+DG LTD+KGRTVDF+NT++IMTSNVG+ ++ R GF D +D Y
Sbjct: 628 NILLQVLDDGHLTDTKGRTVDFRNTIIIMTSNVGAQELQD-QRFAGFGGSSDGQD--YET 684
Query: 556 IKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVT 615
I+ + +ELK FRPEFLNR+D++IVF +LTK E+KEI +M+ ++ +RL ++I + VT
Sbjct: 685 IRKTMLKELKNSFRPEFLNRVDDIIVFHKLTKEELKEIVTMMVNKLTNRLSEQNINIIVT 744
Query: 616 ERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVD 668
++ ++++ EEGY+P YGARPL RAI + +ED+++E +L EG V VD D
Sbjct: 745 DKAKDKIAEEGYDPEYGARPLIRAIQKTIEDNLSELILDGNQIEGKKVTVDHD 797
>gi|418286169|ref|ZP_12898820.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21209]
gi|418924752|ref|ZP_13478655.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG2018]
gi|365167723|gb|EHM59100.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21209]
gi|377746047|gb|EHT70018.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG2018]
Length = 818
Score = 798 bits (2062), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/653 (58%), Positives = 511/653 (78%), Gaps = 9/653 (1%)
Query: 16 GSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVG 75
S N PTL+ +LT +A++G LDPV+GR +I RV+++L RRTKNNP LIGEPGVG
Sbjct: 154 ASKSNNTPTLDSLARDLTVIAKDGTLDPVIGRDKEITRVIEVLSRRTKNNPVLIGEPGVG 213
Query: 76 KTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDE 135
KTAIAEGLAQ I + +VP+T++ K+V++LDMG +VAGTKYRGEFEERLKK+MEEI+Q+
Sbjct: 214 KTAIAEGLAQAIVNNEVPETLKDKRVMSLDMGTVVAGTKYRGEFEERLKKVMEEIQQAGN 273
Query: 136 IILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERR 195
+ILFIDE+HTL+GAG AEGAIDA+NILKP+LARGELQCIGATTLDEYRK+IEKD ALERR
Sbjct: 274 VILFIDELHTLVGAGGAEGAIDASNILKPALARGELQCIGATTLDEYRKNIEKDAALERR 333
Query: 196 FQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAID 255
FQPV+V EPSV +T+ ILKGLR+RYE HH++ +DEA+ +A +LS +Y+SDRFLPDKAID
Sbjct: 334 FQPVQVDEPSVVDTVAILKGLRDRYEAHHRINISDEAIEAAVKLSNRYVSDRFLPDKAID 393
Query: 256 LIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQI 315
LIDEA S+VRL+ P +E+E+E+ ++ EK+ AV Q+FE A LRD++ L+ Q
Sbjct: 394 LIDEASSKVRLKSHTTPNNLKEIEQEIEKVKNEKDAAVHAQEFENAANLRDKQTKLEKQY 453
Query: 316 SALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLH 375
++ K + + ++E DI +++ WTGIP+ K++ ES++LL +E+TLH
Sbjct: 454 EEAKNEWKNAQNGMSTS------LSEEDIAEVIAGWTGIPLTKINETESEKLLSLEDTLH 507
Query: 376 KRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEE 435
+RVIGQ +AV +IS+A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+ALA FG ++
Sbjct: 508 ERVIGQKDAVNSISKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGDDD 567
Query: 436 AMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVF 495
AMIR+DMSEFME+H VS+L+G+PPGYVG+ +GGQLTE VRR+PY+V+LFDEIEKAHPDVF
Sbjct: 568 AMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKVRRKPYSVILFDEIEKAHPDVF 627
Query: 496 NMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNR 555
N++LQ+L+DG LTD+KGRTVDF+NT++IMTSNVG+ ++ R GF D +D Y
Sbjct: 628 NILLQVLDDGHLTDTKGRTVDFRNTIIIMTSNVGAQELQD-QRFAGFGGSSDGQD--YET 684
Query: 556 IKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVT 615
I+ + +ELK FRPEFLNR+D++IVF +LTK E+KEI +M+ ++ +RL ++I + VT
Sbjct: 685 IQKTMLKELKNSFRPEFLNRVDDIIVFHKLTKEELKEIVTMMVNKLTNRLSEQNINIIVT 744
Query: 616 ERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVD 668
++ ++++ EEGY+P YGARPL RAI + +ED+++E +L EG V VD D
Sbjct: 745 DKAKDKIAEEGYDPEYGARPLIRAIQKTIEDNLSELILDGNQIEGKKVTVDHD 797
>gi|358052016|ref|ZP_09146007.1| endopeptidase [Staphylococcus simiae CCM 7213]
gi|357258496|gb|EHJ08562.1| endopeptidase [Staphylococcus simiae CCM 7213]
Length = 816
Score = 798 bits (2062), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 383/652 (58%), Positives = 516/652 (79%), Gaps = 9/652 (1%)
Query: 17 SSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGK 76
S N PTL+ +LT +A++G LDPV+GR +I RV+++L RRTKNNP LIGEPGVGK
Sbjct: 155 SKANNTPTLDSLARDLTVIAKDGTLDPVIGRDKEITRVIEVLSRRTKNNPVLIGEPGVGK 214
Query: 77 TAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEI 136
TAIAEGLAQ I +VP+T++ K+V++LDMG +VAGTKYRGEFEERLKK+MEEI+Q+ +
Sbjct: 215 TAIAEGLAQAIVKNEVPETLKDKRVMSLDMGTVVAGTKYRGEFEERLKKVMEEIQQAGNV 274
Query: 137 ILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRF 196
ILFIDE+HTL+GAG AEGAIDA+NILKP+LARGELQCIGATTLDEYRK+IEKD ALERRF
Sbjct: 275 ILFIDELHTLVGAGGAEGAIDASNILKPALARGELQCIGATTLDEYRKNIEKDAALERRF 334
Query: 197 QPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDL 256
QPV+V EP+V++T++ILKGLR+RYE HH++ +DEAL +A +LS +Y+SDRFLPDKAIDL
Sbjct: 335 QPVQVDEPTVEDTVEILKGLRDRYEAHHRINISDEALEAAVRLSNRYVSDRFLPDKAIDL 394
Query: 257 IDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQIS 316
IDEA S+VRL+ P +E+E+E+ ++ EK+ AV Q+FE A LRD++ L+ Q
Sbjct: 395 IDEASSKVRLKSHTTPTNLKEIEQEIEKVKNEKDAAVHAQEFENAANLRDKQTKLEKQYE 454
Query: 317 ALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHK 376
++ K T+ G + ++E DI +++ WTGIP+ K++ ES++LL +E+TLH+
Sbjct: 455 EAKNEWK-----NTQNG-MSTSLSEEDIAEVIAGWTGIPLTKINETESEKLLGLEDTLHE 508
Query: 377 RVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEA 436
RVIGQ +AV +IS+A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+ALA FG ++A
Sbjct: 509 RVIGQKDAVNSISKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGDDDA 568
Query: 437 MIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFN 496
MIR+DMSEFME+H VS+L+G+PPGYVG+ +GGQLTE VRR+PY+V+LFDEIEKAHPDVFN
Sbjct: 569 MIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKVRRKPYSVILFDEIEKAHPDVFN 628
Query: 497 MMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRI 556
++LQ+L+DG LTD+KGRTVDF+NT++IMTSNVG+ ++ R GF + +D Y I
Sbjct: 629 ILLQVLDDGHLTDTKGRTVDFRNTIIIMTSNVGAQELQD-QRFAGFGGASEGQD--YETI 685
Query: 557 KSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTE 616
+ + +ELK FRPEFLNR+D++IVF +L+K E+KEI +M+K++ DRL ++I ++VT+
Sbjct: 686 RKTMMKELKNAFRPEFLNRVDDIIVFHKLSKDELKEIVTMMVKKLTDRLSEQNINIKVTD 745
Query: 617 RFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVD 668
+ ++++ EEGY+P YGARPL RAI + +ED+++E +L EG V VD D
Sbjct: 746 KAKDKIAEEGYDPEYGARPLIRAIQKTIEDNLSELILDGNKIEGKEVTVDHD 797
>gi|448744005|ref|ZP_21725910.1| ATP-dependent Clp protease ATP-binding subunit clpC [Staphylococcus
aureus KT/Y21]
gi|445562744|gb|ELY18910.1| ATP-dependent Clp protease ATP-binding subunit clpC [Staphylococcus
aureus KT/Y21]
Length = 818
Score = 798 bits (2062), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/653 (58%), Positives = 511/653 (78%), Gaps = 9/653 (1%)
Query: 16 GSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVG 75
S N PTL+ +LT +A++G LDPV+GR +I RV+++L RRTKNNP LIGEPGVG
Sbjct: 154 ASKSNNTPTLDSLARDLTVIAKDGTLDPVIGRDKEITRVIEVLSRRTKNNPVLIGEPGVG 213
Query: 76 KTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDE 135
KTAIAEGLAQ I + +VP+T++ K+V++LDMG +VAGTKYRGEFEERLKK+MEEI+Q+
Sbjct: 214 KTAIAEGLAQAIVNNEVPETLKDKRVMSLDMGTVVAGTKYRGEFEERLKKVMEEIQQAGN 273
Query: 136 IILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERR 195
+ILFIDE+HTL+GAG AEGAIDA+NILKP+LARGELQCIGATTLDEYRK+IEKD ALERR
Sbjct: 274 VILFIDELHTLVGAGGAEGAIDASNILKPALARGELQCIGATTLDEYRKNIEKDAALERR 333
Query: 196 FQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAID 255
FQPV+V EPSV +T+ ILKGLR+RYE HH++ +DEA+ +A +LS +Y+SDRFLPDKAID
Sbjct: 334 FQPVQVDEPSVVDTVAILKGLRDRYEAHHRINISDEAIEAAVKLSNRYVSDRFLPDKAID 393
Query: 256 LIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQI 315
LIDEA S+VRL+ P +E+E+E+ ++ EK+ AV Q+FE A LRD++ L+ Q
Sbjct: 394 LIDEASSKVRLKSHTTPNNLKEIEQEIEKVKNEKDAAVHAQEFENAANLRDKQTKLEKQY 453
Query: 316 SALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLH 375
++ K + + ++E DI +++ WTGIP+ K++ ES++LL +E+TLH
Sbjct: 454 EEAKNEWKNAQNGMSTS------LSEEDIAEVIAGWTGIPLTKINETESEKLLSLEDTLH 507
Query: 376 KRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEE 435
+RVIGQ +AV +IS+A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+ALA FG ++
Sbjct: 508 ERVIGQKDAVNSISKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGDDD 567
Query: 436 AMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVF 495
AMIR+DMSEFME+H VS+L+G+PPGYVG+ +GGQLTE VRR+PY+V+LFDEIEKAHPDVF
Sbjct: 568 AMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKVRRKPYSVILFDEIEKAHPDVF 627
Query: 496 NMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNR 555
N++LQ+L+DG LTD+KGRTVDF+NT++IMTSNVG+ ++ R GF D +D Y
Sbjct: 628 NILLQVLDDGHLTDTKGRTVDFRNTIIIMTSNVGAQELQD-QRFAGFGGSSDGQD--YET 684
Query: 556 IKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVT 615
I+ + +ELK FRPEFLNR+D++IVF +LTK E+KEI +M+ ++ +RL ++I + VT
Sbjct: 685 IRKTMLKELKNSFRPEFLNRVDDIIVFHKLTKEELKEIVTMMVNKLTNRLSEQNINIIVT 744
Query: 616 ERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVD 668
++ ++++ EEGY+P YGARPL RAI + +ED+++E +L EG V VD D
Sbjct: 745 DKAKDKIAEEGYDPEYGARPLIRAIQKTIEDNLSELILDGNQIEGKKVTVDHD 797
>gi|408530234|emb|CCK28408.1| putative ATP-dependent Clp protease ATP-binding subunit
[Streptomyces davawensis JCM 4913]
Length = 841
Score = 798 bits (2062), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/687 (58%), Positives = 530/687 (77%), Gaps = 16/687 (2%)
Query: 11 AGVGGGSSGNKMPTL--EEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCL 68
A GG + G +L +++G NLT+ A E KLDPV+GR+ +IERV+Q+L RRTKNNP L
Sbjct: 151 ATAGGPAEGTPSTSLVLDQFGRNLTQAARESKLDPVIGREKEIERVMQVLSRRTKNNPVL 210
Query: 69 IGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLME 128
IGEPGVGKTA+ EGLAQ I G+VP+T++ K + TLD+G LVAG++YRG+FEERLKK+++
Sbjct: 211 IGEPGVGKTAVVEGLAQAIVKGEVPETLKDKHLYTLDLGALVAGSRYRGDFEERLKKVLK 270
Query: 129 EIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEK 188
EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEYRKH+EK
Sbjct: 271 EIRTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIGATTLDEYRKHLEK 330
Query: 189 DPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRF 248
D ALERRFQP++V EPS+ TI+ILKGLR+RYE HH++ TDEALV AA L+ +YISDRF
Sbjct: 331 DAALERRFQPIQVAEPSLPHTIEILKGLRDRYEAHHRVSITDEALVQAATLADRYISDRF 390
Query: 249 LPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDRE 308
LPDKAIDLIDEAGSR+R+R P + RE ++++ + ++K A+ QDFEKA LRD+E
Sbjct: 391 LPDKAIDLIDEAGSRMRIRRMTAPPDLREFDEKIAGVRRDKESAIDSQDFEKAASLRDKE 450
Query: 309 MDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKVSTDESD 365
L A K + E +AGD+ VV EVD I +++ TGIPV K++ +ES
Sbjct: 451 KQLLA--------AKAKREKEWKAGDM-DVVAEVDGDLIAEVLATATGIPVFKLTEEESS 501
Query: 366 RLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKA 425
RLL+ME+ LHKRVIGQ +AVKA+S+AIRR R GLK+P RP SFIF+GP+GVGK+EL+KA
Sbjct: 502 RLLRMEDELHKRVIGQTDAVKALSKAIRRTRAGLKDPKRPGGSFIFAGPSGVGKTELSKA 561
Query: 426 LAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFD 485
LA + FG E+A+I LDMSEF E+HTVS+L GSPPGYVGY EGGQLTE VRR+P++VVLFD
Sbjct: 562 LAEFLFGDEDALISLDMSEFSEKHTVSRLFGSPPGYVGYEEGGQLTEKVRRKPFSVVLFD 621
Query: 486 EIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLD 545
E+EKAHPD+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N+G+ I K G +GF
Sbjct: 622 EVEKAHPDIFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNLGTRDISK-GFNLGFAAS 680
Query: 546 YDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRL 605
D+K ++Y R+K+ V++ELKQ+FRPEFLNR+D+++VF QLT+ ++ I D+M+ +V +RL
Sbjct: 681 GDKK-TNYERMKNKVSDELKQHFRPEFLNRVDDVVVFPQLTQEDILAIVDLMIGKVDERL 739
Query: 606 KTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIV 665
K +D+ +++++ +E + ++GY+P GARPLRR I R +EDS++EK+L E++ G V+V
Sbjct: 740 KDRDMGIELSQSAKELLSKKGYDPVLGARPLRRTIQREIEDSLSEKILFGELRPGHIVVV 799
Query: 666 DVDSDGNVTVLNGSSGAPESLADPLPV 692
D + +G +L D P+
Sbjct: 800 DTEGEGETQTFTFRGEEKSALPDVPPI 826
>gi|345852637|ref|ZP_08805570.1| ATP-dependent Clp protease [Streptomyces zinciresistens K42]
gi|345635897|gb|EGX57471.1| ATP-dependent Clp protease [Streptomyces zinciresistens K42]
Length = 841
Score = 798 bits (2062), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/687 (58%), Positives = 531/687 (77%), Gaps = 16/687 (2%)
Query: 11 AGVGGGSSGNKMPTL--EEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCL 68
A GG + G +L +++G NLT+ A E KLDPV+GR+ +IERV+Q+L RRTKNNP L
Sbjct: 151 ATAGGPAEGTPSTSLVLDQFGRNLTQAARESKLDPVIGREKEIERVMQVLSRRTKNNPVL 210
Query: 69 IGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLME 128
IGEPGVGKTA+ EGLAQ I G+VP+T++ K + TLD+G LVAG++YRG+FEERLKK+++
Sbjct: 211 IGEPGVGKTAVVEGLAQAIVKGEVPETLKDKHLYTLDLGALVAGSRYRGDFEERLKKVLK 270
Query: 129 EIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEK 188
EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEYRKH+EK
Sbjct: 271 EIRTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIGATTLDEYRKHLEK 330
Query: 189 DPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRF 248
D ALERRFQP++V EPS+ TI+ILKGLR+RYE HH++ TDEALV AA L+ +YISDRF
Sbjct: 331 DAALERRFQPIQVAEPSLPHTIEILKGLRDRYEAHHRVSITDEALVQAATLADRYISDRF 390
Query: 249 LPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDRE 308
LPDKAIDLIDEAGSR+R+R P + RE ++++ + ++K A+ QDFEKA LRD+E
Sbjct: 391 LPDKAIDLIDEAGSRMRIRRMTAPPDLREFDEKIAGVRRDKESAIDSQDFEKAASLRDKE 450
Query: 309 MDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKVSTDESD 365
L A K + E +AGD+ VV EVD I +++ TGIPV K++ +ES
Sbjct: 451 KQLLA--------AKAKREKEWKAGDMD-VVAEVDGELIAEVLATATGIPVFKLTEEESS 501
Query: 366 RLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKA 425
RLL+ME+ LHKRVIGQ +AVKA+S+AIRR R GLK+P RP SFIF+GP+GVGK+EL+KA
Sbjct: 502 RLLRMEDELHKRVIGQKDAVKALSKAIRRTRAGLKDPKRPGGSFIFAGPSGVGKTELSKA 561
Query: 426 LAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFD 485
LA + FG E+A+I LDMSEF E+HTVS+L GSPPGYVGY EGGQLTE VRR+P++VVLFD
Sbjct: 562 LAEFLFGDEDALISLDMSEFSEKHTVSRLFGSPPGYVGYEEGGQLTEKVRRKPFSVVLFD 621
Query: 486 EIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLD 545
E+EKAHPD+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N+G+ I K G +GF
Sbjct: 622 EVEKAHPDIFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNLGTRDISK-GFNLGFAAS 680
Query: 546 YDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRL 605
D K S+Y R+K+ V++ELKQ+FRPEFLNR+D+++VF QLT+ ++ +I D+M+ +V +RL
Sbjct: 681 GDTK-SNYERMKNKVSDELKQHFRPEFLNRVDDVVVFPQLTQDDILKIVDLMVGKVDERL 739
Query: 606 KTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIV 665
K +D+ +++++ +E + ++GY+P GARPLRR I R +ED+++EK+L E++ G V+V
Sbjct: 740 KDRDMGIELSQSAKELLSKKGYDPVLGARPLRRTIQREIEDTLSEKILFGELRPGHIVVV 799
Query: 666 DVDSDGNVTVLNGSSGAPESLADPLPV 692
D + +G+ +L D P+
Sbjct: 800 DTEGEGDTKTFTFRGEEKSALPDVPPI 826
>gi|21221802|ref|NP_627581.1| Clp-family ATP-binding protease [Streptomyces coelicolor A3(2)]
gi|289770914|ref|ZP_06530292.1| Clp-family ATP-binding protease [Streptomyces lividans TK24]
gi|4585605|emb|CAB40873.1| putative Clp-family ATP-binding protease [Streptomyces coelicolor
A3(2)]
gi|289701113|gb|EFD68542.1| Clp-family ATP-binding protease [Streptomyces lividans TK24]
Length = 841
Score = 798 bits (2061), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/687 (58%), Positives = 530/687 (77%), Gaps = 16/687 (2%)
Query: 11 AGVGGGSSGNKMPTL--EEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCL 68
A GG + G +L +++G NLT+ A E KLDPV+GR+ +IERV+Q+L RRTKNNP L
Sbjct: 151 ATAGGPAEGTPSTSLVLDQFGRNLTQAARESKLDPVIGREKEIERVMQVLSRRTKNNPVL 210
Query: 69 IGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLME 128
IGEPGVGKTA+ EGLAQ I G+VP+T++ K + TLD+G LVAG++YRG+FEERLKK+++
Sbjct: 211 IGEPGVGKTAVVEGLAQAIVKGEVPETLKDKHLYTLDLGALVAGSRYRGDFEERLKKVLK 270
Query: 129 EIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEK 188
EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEYRKH+EK
Sbjct: 271 EIRTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIGATTLDEYRKHLEK 330
Query: 189 DPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRF 248
D ALERRFQP++V EPS+ TI+ILKGLR+RYE HH++ TDEALV AA L+ +YISDRF
Sbjct: 331 DAALERRFQPIQVAEPSLPHTIEILKGLRDRYEAHHRVSITDEALVQAATLADRYISDRF 390
Query: 249 LPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDRE 308
LPDKAIDLIDEAGSR+R+R P + RE ++++ + ++K A+ QDFEKA LRD+E
Sbjct: 391 LPDKAIDLIDEAGSRMRIRRMTAPPDLREFDEKIAGVRRDKESAIDSQDFEKAASLRDKE 450
Query: 309 MDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKVSTDESD 365
L A K + E +AGD+ VV EVD I +++ TGIPV K++ +ES
Sbjct: 451 KQLLA--------AKAKREKEWKAGDMD-VVAEVDGELIAEVLATATGIPVFKLTEEESS 501
Query: 366 RLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKA 425
RLL+ME+ LHKRVIGQ +AVKA+S+AIRR R GLK+P RP SFIF+GP+GVGK+EL+KA
Sbjct: 502 RLLRMEDELHKRVIGQKDAVKALSKAIRRTRAGLKDPKRPGGSFIFAGPSGVGKTELSKA 561
Query: 426 LAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFD 485
LA + FG E+A+I LDMSEF E+HTVS+L GSPPGYVGY EGGQLTE VRR+P++VVLFD
Sbjct: 562 LAEFLFGDEDALISLDMSEFSEKHTVSRLFGSPPGYVGYEEGGQLTEKVRRKPFSVVLFD 621
Query: 486 EIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLD 545
E+EKAHPD+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N+G+ I K G +GF
Sbjct: 622 EVEKAHPDIFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNLGTRDISK-GFNLGFAAA 680
Query: 546 YDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRL 605
D K S+Y R+K+ V +ELKQ+FRPEFLNR+D+++VF QL++ ++ +I D+M+++V +RL
Sbjct: 681 GDTK-SNYERMKNKVQDELKQHFRPEFLNRVDDVVVFPQLSQDDILQIVDLMIQKVDERL 739
Query: 606 KTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIV 665
K +D+ +++++ +E + + GY+P GARPLRR I R +EDS++EK+L E++ G V+V
Sbjct: 740 KDRDMGIELSQSAKELLSKRGYDPVLGARPLRRTIQREVEDSLSEKILFGELRPGHIVVV 799
Query: 666 DVDSDGNVTVLNGSSGAPESLADPLPV 692
D + +G+ +L D P+
Sbjct: 800 DTEGEGDAATFTFRGEEKSTLPDVPPI 826
>gi|239636922|ref|ZP_04677920.1| negative regulator of genetic competence ClpC/mecB [Staphylococcus
warneri L37603]
gi|239597470|gb|EEQ79969.1| negative regulator of genetic competence ClpC/mecB [Staphylococcus
warneri L37603]
Length = 817
Score = 798 bits (2061), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/656 (58%), Positives = 511/656 (77%), Gaps = 9/656 (1%)
Query: 16 GSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVG 75
+ N PTL+ +LT +A++G LDPVVGR +I RV+++L RRTKNNP LIGEPGVG
Sbjct: 154 ANKSNNTPTLDGLARDLTIIAKDGTLDPVVGRDKEITRVIEVLSRRTKNNPVLIGEPGVG 213
Query: 76 KTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDE 135
KTAIAEGLAQ I + +VP+T++ K+V++LDMG +VAGTKYRGEFEERLKK+MEEI Q+
Sbjct: 214 KTAIAEGLAQAIVNNEVPETLKNKRVMSLDMGTVVAGTKYRGEFEERLKKVMEEIHQAGN 273
Query: 136 IILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERR 195
+ILFIDE+HTL+GAG AEGAIDA+NILKP+LARGELQCIGATTLDEYRK+IEKD ALERR
Sbjct: 274 VILFIDELHTLVGAGGAEGAIDASNILKPALARGELQCIGATTLDEYRKNIEKDAALERR 333
Query: 196 FQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAID 255
FQP++V EP+V++T+ ILKGLR+RYE HH++ +DEAL +AA+LS++Y+SDRFLPDKAID
Sbjct: 334 FQPIQVDEPTVEDTVSILKGLRDRYEAHHRINISDEALEAAAKLSHRYVSDRFLPDKAID 393
Query: 256 LIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQI 315
LIDEA S+VRL+ P +E+E+++ ++ EK+ AV Q+FE A LRD++ L+ Q
Sbjct: 394 LIDEASSKVRLKSHTTPNNLKEIEQQIEKVKNEKDAAVHAQEFENAANLRDKQTKLEKQY 453
Query: 316 SALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLH 375
++ K V ++E DI +++ WTGIP+ +++ ESDRLL +E+TLH
Sbjct: 454 EEAKNEWKNSQDG------VSTSLSEEDIAEVIAGWTGIPLTRINETESDRLLNLEDTLH 507
Query: 376 KRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEE 435
RVIGQ +AV +IS+A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+ALA FG ++
Sbjct: 508 HRVIGQKDAVTSISKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGEDD 567
Query: 436 AMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVF 495
AMIR+DMSEFME+H VS+L+G+PPGY+G+ +GGQLTE VRR+PY+V+LFDEIEKAHPDVF
Sbjct: 568 AMIRVDMSEFMEKHAVSRLVGAPPGYIGHDDGGQLTEKVRRKPYSVILFDEIEKAHPDVF 627
Query: 496 NMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNR 555
N++LQ+L+DG LTD+KGR VDF+NT++IMTSNVG+ ++ R GF D +D Y
Sbjct: 628 NILLQVLDDGHLTDTKGRQVDFRNTVIIMTSNVGAQELQD-QRFAGFGGADDGQD--YES 684
Query: 556 IKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVT 615
I+ + +ELK FRPEFLNR+D++IVF +L+K E+KEI +M+ ++ RL ++I ++VT
Sbjct: 685 IRKTMMKELKNAFRPEFLNRVDDIIVFHKLSKDELKEIVTMMVNKLTLRLSEQNINIKVT 744
Query: 616 ERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDG 671
E+ +E++ EEGY+P YGARPL RAI + +ED+++E +L EG V VD D +
Sbjct: 745 EKAKEKIAEEGYDPEYGARPLIRAIQKTVEDNLSELILDGNQLEGKEVTVDHDGEA 800
>gi|417902906|ref|ZP_12546767.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21269]
gi|341850525|gb|EGS91643.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21269]
Length = 818
Score = 798 bits (2061), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 379/651 (58%), Positives = 510/651 (78%), Gaps = 9/651 (1%)
Query: 16 GSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVG 75
S N PTL+ +LT +A++G LDP++GR +I RV+++L RRTKNNP LIGEPGVG
Sbjct: 154 ASKSNNTPTLDSLARDLTVIAKDGTLDPIIGRDKEITRVIEVLSRRTKNNPVLIGEPGVG 213
Query: 76 KTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDE 135
KTAIAEGLAQ I + +VP+T++ K+V++LDMG +VAGTKYRGEFEERLKK+MEEI+Q+
Sbjct: 214 KTAIAEGLAQAIVNNEVPETLKDKRVMSLDMGTVVAGTKYRGEFEERLKKVMEEIQQAGN 273
Query: 136 IILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERR 195
+ILFIDE+HTL+GAG AEGAIDA+NILKP+LARGELQCIGATTLDEYRK+IEKD ALERR
Sbjct: 274 VILFIDELHTLVGAGGAEGAIDASNILKPALARGELQCIGATTLDEYRKNIEKDAALERR 333
Query: 196 FQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAID 255
FQPV+V EPSV +T+ ILKGLR+RYE HH++ +DEA+ +A +LS +Y+SDRFLPDKAID
Sbjct: 334 FQPVQVDEPSVVDTVAILKGLRDRYEAHHRINISDEAIEAAVKLSNRYVSDRFLPDKAID 393
Query: 256 LIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQI 315
LIDEA S+VRL+ P +E+E+E+ ++ EK+ AV Q+FE A LRD++ L+ Q
Sbjct: 394 LIDEASSKVRLKSHTTPNNLKEIEQEIEKVKNEKDAAVHAQEFENAANLRDKQTKLEKQY 453
Query: 316 SALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLH 375
++ K + + ++E DI +++ WTGIP+ K++ ES++LL +E+TLH
Sbjct: 454 EEAKNEWKNAQNGMSTS------LSEEDIAEVIAGWTGIPLTKINETESEKLLSLEDTLH 507
Query: 376 KRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEE 435
+RVIGQ +AV +IS+A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+ALA FG ++
Sbjct: 508 ERVIGQKDAVNSISKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGDDD 567
Query: 436 AMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVF 495
AMIR+DMSEFME+H VS+L+G+PPGYVG+ +GGQLTE VRR+PY+V+LFDEIEKAHPDVF
Sbjct: 568 AMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKVRRKPYSVILFDEIEKAHPDVF 627
Query: 496 NMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNR 555
N++LQ+L+DG LTD+KGRTVDF+NT++IMTSNVG+ ++ R GF D +D Y
Sbjct: 628 NILLQVLDDGHLTDTKGRTVDFRNTIIIMTSNVGAQELQD-QRFAGFGGSSDGQD--YET 684
Query: 556 IKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVT 615
I+ + +ELK FRPEFLNR+D++IVF +LTK E+KEI +M+ ++ +RL ++I + VT
Sbjct: 685 IRKTMLKELKNSFRPEFLNRVDDIIVFHKLTKEELKEIVTMMVNKLTNRLSEQNINIIVT 744
Query: 616 ERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVD 666
++ ++++ EEGY+P YGARPL RAI + +ED+++E +L EG V VD
Sbjct: 745 DKAKDKIAEEGYDPEYGARPLIRAIQKTIEDNLSELILNGNQIEGKKVTVD 795
>gi|424827469|ref|ZP_18252273.1| negative regulator of genetic competence MecB/ClpC [Clostridium
sporogenes PA 3679]
gi|365980083|gb|EHN16120.1| negative regulator of genetic competence MecB/ClpC [Clostridium
sporogenes PA 3679]
Length = 811
Score = 798 bits (2061), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/655 (59%), Positives = 528/655 (80%), Gaps = 8/655 (1%)
Query: 17 SSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGK 76
+S + PTL+++G +LT++AEEGK+DPV+GR + +RV++IL RRTKNNPCLIGEPGVGK
Sbjct: 157 TSKSSTPTLDQFGRDLTEMAEEGKIDPVIGRDKETQRVLEILCRRTKNNPCLIGEPGVGK 216
Query: 77 TAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEI 136
TAIAEGLAQ I +G++P+ ++ K+V+TLD+ ++AG KYRGEFE+RLKK+MEE++ S +
Sbjct: 217 TAIAEGLAQNIINGNIPEILKNKRVVTLDLTSMIAGAKYRGEFEDRLKKIMEEVRNSKDT 276
Query: 137 ILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRF 196
ILFIDE+HT++GAGAAEGAIDAANILKP+LARGE+QCIGATTLDEYRK+IEKD ALERRF
Sbjct: 277 ILFIDEIHTIVGAGAAEGAIDAANILKPALARGEIQCIGATTLDEYRKYIEKDSALERRF 336
Query: 197 QPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDL 256
QP+ V EP+ +ETI+ILKGLR++YE HH++++TD+A+ +A LS +YI DRFLPDKAIDL
Sbjct: 337 QPINVGEPTKEETIEILKGLRDKYEAHHRVKFTDDAIYAAVNLSDRYIRDRFLPDKAIDL 396
Query: 257 IDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQIS 316
IDEAGS+VR+ + P + + +E++L ++ KEK +A+R QDFEKA LRD+E +LK ++
Sbjct: 397 IDEAGSKVRIENLIAPPDLKNIEEQLDKVVKEKEDAIRVQDFEKAANLRDKEKELKEKLE 456
Query: 317 ALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHK 376
L AE E ++ +V+E I +VS WT IPV K++ ES+RLLK+E+ LH
Sbjct: 457 GLKKDW----NAEKEGSNL--IVSEQQIASVVSKWTNIPVNKLTEKESERLLKLEDILHN 510
Query: 377 RVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEA 436
RVIGQ+EA+K++S+++RRARVGLK+P RPI SFIF GPTGVGK+EL KALA FG+E
Sbjct: 511 RVIGQEEAIKSVSKSVRRARVGLKDPKRPIGSFIFLGPTGVGKTELTKALAEAMFGNENN 570
Query: 437 MIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFN 496
MIR+DMSE+ME+H+VS+LIGSPPGYVG+ EGGQLTE VR PY+VVLFDEIEKAHP+VFN
Sbjct: 571 MIRVDMSEYMEKHSVSRLIGSPPGYVGHDEGGQLTEKVRTNPYSVVLFDEIEKAHPEVFN 630
Query: 497 MMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDY-DEKDSSYNR 555
++LQILEDGRLTD KG+TVDF+NT++IMTSNVG+S I + + +GF+ +E+++ Y +
Sbjct: 631 ILLQILEDGRLTDGKGKTVDFRNTIIIMTSNVGASTISR-QKTLGFNTSIEEERETEYEK 689
Query: 556 IKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVT 615
+K + ELK FRPEFLNR+D++IVF QL + +KEI +MLK V +R++ + I+L+ T
Sbjct: 690 MKDNIMHELKHSFRPEFLNRIDDIIVFHQLREEHIKEIVKLMLKIVSNRVEDQGIKLEFT 749
Query: 616 ERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSD 670
E + + +EGY+ +YGARPLRRAI +++ED ++E++L IK+GDSV V+ D
Sbjct: 750 EEAEKILAKEGYDTNYGARPLRRAITKIVEDKLSEEILKGNIKKGDSVKVNTIED 804
>gi|418476245|ref|ZP_13045570.1| Clp-family ATP-binding protease [Streptomyces coelicoflavus ZG0656]
gi|371543153|gb|EHN71987.1| Clp-family ATP-binding protease [Streptomyces coelicoflavus ZG0656]
Length = 841
Score = 798 bits (2061), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/687 (58%), Positives = 530/687 (77%), Gaps = 16/687 (2%)
Query: 11 AGVGGGSSGNKMPTL--EEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCL 68
A GG + G +L +++G NLT+ A E KLDPV+GR+ +IERV+Q+L RRTKNNP L
Sbjct: 151 ATAGGPAEGTPSTSLVLDQFGRNLTQAARESKLDPVIGREKEIERVMQVLSRRTKNNPVL 210
Query: 69 IGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLME 128
IGEPGVGKTA+ EGLAQ I G+VP+T++ K + TLD+G LVAG++YRG+FEERLKK+++
Sbjct: 211 IGEPGVGKTAVVEGLAQAIVKGEVPETLKDKHLYTLDLGALVAGSRYRGDFEERLKKVLK 270
Query: 129 EIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEK 188
EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEYRKH+EK
Sbjct: 271 EIRTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIGATTLDEYRKHLEK 330
Query: 189 DPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRF 248
D ALERRFQP++V EPS+ TI+ILKGLR+RYE HH++ TDEALV AA L+ +YISDRF
Sbjct: 331 DAALERRFQPIQVAEPSLPHTIEILKGLRDRYEAHHRVSITDEALVQAATLADRYISDRF 390
Query: 249 LPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDRE 308
LPDKAIDLIDEAGSR+R+R P + RE ++++ + ++K A+ QDFEKA LRD+E
Sbjct: 391 LPDKAIDLIDEAGSRMRIRRMTAPPDLREFDEKIAGVRRDKESAIDSQDFEKAASLRDKE 450
Query: 309 MDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKVSTDESD 365
L A K + E +AGD+ VV EVD I +++ TGIPV K++ +ES
Sbjct: 451 KQLLA--------AKAKREKEWKAGDMD-VVAEVDGELIAEVLATATGIPVFKLTEEESS 501
Query: 366 RLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKA 425
RLL+ME+ LHKRVIGQ +AVKA+S+AIRR R GLK+P RP SFIF+GP+GVGK+EL+KA
Sbjct: 502 RLLRMEDELHKRVIGQKDAVKALSKAIRRTRAGLKDPKRPGGSFIFAGPSGVGKTELSKA 561
Query: 426 LAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFD 485
LA + FG E+A+I LDMSEF E+HTVS+L GSPPGYVGY EGGQLTE VRR+P++VVLFD
Sbjct: 562 LAEFLFGDEDALISLDMSEFSEKHTVSRLFGSPPGYVGYEEGGQLTEKVRRKPFSVVLFD 621
Query: 486 EIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLD 545
E+EKAHPD+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N+G+ I K G +GF
Sbjct: 622 EVEKAHPDIFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNLGTRDISK-GFNLGFAAA 680
Query: 546 YDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRL 605
D K S+Y R+K+ V +ELKQ+FRPEFLNR+D+++VF QL++ ++ +I D+M+++V +RL
Sbjct: 681 GDTK-SNYERMKNKVQDELKQHFRPEFLNRVDDVVVFPQLSQDDILQIVDLMIQKVDERL 739
Query: 606 KTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIV 665
K +D+ +++++ +E + + GY+P GARPLRR I R +EDS++EK+L E++ G V+V
Sbjct: 740 KDRDMGIELSQSAKELLSKRGYDPVLGARPLRRTIQREVEDSLSEKILFGELRPGHIVVV 799
Query: 666 DVDSDGNVTVLNGSSGAPESLADPLPV 692
D + +G+ +L D P+
Sbjct: 800 DTEGEGDTATFTFRGEEKSTLPDVPPI 826
>gi|403737328|ref|ZP_10950162.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Austwickia
chelonae NBRC 105200]
gi|403192628|dbj|GAB76932.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Austwickia
chelonae NBRC 105200]
Length = 870
Score = 798 bits (2061), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/696 (57%), Positives = 534/696 (76%), Gaps = 19/696 (2%)
Query: 4 ESTEAVGAGVGGGSSGNKMPT----LEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 59
+ E AGVGG S+ P L+++G NLT+ A EGKLDPV+GR +IERV+Q+L
Sbjct: 146 QGKETAAAGVGGQSTQEGTPAGSLVLDQFGRNLTQAAREGKLDPVIGRSKEIERVMQVLS 205
Query: 60 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 119
RRTKNNP LIGEPGVGKTA+ EGLAQ I G+VP+T++ K + TLD+G LVAG++YRG+F
Sbjct: 206 RRTKNNPILIGEPGVGKTAVVEGLAQDIVKGEVPETLKDKHIYTLDLGALVAGSRYRGDF 265
Query: 120 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 179
EERLKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTL
Sbjct: 266 EERLKKVLKEIRTRGDIILFIDEIHTLVGAGAAEGAIDAASILKPMLARGELQTIGATTL 325
Query: 180 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 239
DEYRKHIEKDPALERRFQP++V EP++ TI+ILKGLR+RYE HH++ TD AL++AA L
Sbjct: 326 DEYRKHIEKDPALERRFQPIQVAEPTLPHTIEILKGLRDRYEAHHRVSITDSALIAAANL 385
Query: 240 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 299
+ +YI+DR+LPDKAIDLIDEAG+R+R+R P + RE ++++ + +EK A+ GQDFE
Sbjct: 386 ADRYINDRYLPDKAIDLIDEAGARLRIRRMTAPPDLREFDEKIAHVRREKEAAIDGQDFE 445
Query: 300 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPV 356
KA +LRD E L+D K + E ++GD+ VV EVD I +++A TGIPV
Sbjct: 446 KAAKLRDDE-------KQLID-AKAKREKEWKSGDMD-VVAEVDEELIAEVLAASTGIPV 496
Query: 357 EKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTG 416
K++ +ES RLL ME LHKR++G D+A+KA+S++IRR R GLK+P RP SFIF+GPTG
Sbjct: 497 FKLTEEESTRLLNMEAELHKRIVGMDDAIKALSQSIRRTRAGLKDPRRPGGSFIFAGPTG 556
Query: 417 VGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRR 476
VGK+ELAKALA + FG E+++I LDMSEF E+HTVS+L GSPPGYVGY EGGQLTE VRR
Sbjct: 557 VGKTELAKALAEFLFGDEDSLITLDMSEFAEKHTVSRLFGSPPGYVGYEEGGQLTEKVRR 616
Query: 477 RPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKG 536
+P++VVLFDE+EKAH D+FN +LQILEDGRLTDS+GR VDFKNT+++MT+N+G+ I K
Sbjct: 617 KPFSVVLFDEVEKAHADIFNSLLQILEDGRLTDSQGRVVDFKNTVILMTTNLGTRDISK- 675
Query: 537 GRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADI 596
+GF D S+Y R+K+ V +ELKQ+FRPEFLNR+D+++VF QLT+ E+ +I D+
Sbjct: 676 AVSLGFAPDSSAGASNYERMKNKVQDELKQHFRPEFLNRVDDIVVFPQLTEDEIVQIVDL 735
Query: 597 MLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLARE 656
M+ + +RL+ KD+ ++++ ++ + ++GY+P GARPLRRAI R +ED ++EK+L E
Sbjct: 736 MIARLDERLRDKDMGIELSPAAKKLLAKKGYDPVLGARPLRRAIQRDIEDVLSEKILYGE 795
Query: 657 IKEGDSVIVDVDSDGNVTVLNGSSGAPESLADPLPV 692
I G+ V VDV+ +G GA + L DPLPV
Sbjct: 796 IGAGELVSVDVEGEGKDAKFT-FVGAKKDL-DPLPV 829
>gi|384546805|ref|YP_005736058.1| ATP-dependent Clp protease, ATP-binding subunit ClpC
[Staphylococcus aureus subsp. aureus ED133]
gi|416840758|ref|ZP_11903945.1| endopeptidase [Staphylococcus aureus O11]
gi|416846026|ref|ZP_11906369.1| endopeptidase [Staphylococcus aureus O46]
gi|298693856|gb|ADI97078.1| ATP-dependent Clp protease, ATP-binding subunit ClpC
[Staphylococcus aureus subsp. aureus ED133]
gi|323439794|gb|EGA97511.1| endopeptidase [Staphylococcus aureus O11]
gi|323443104|gb|EGB00724.1| endopeptidase [Staphylococcus aureus O46]
Length = 818
Score = 798 bits (2061), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/651 (58%), Positives = 510/651 (78%), Gaps = 9/651 (1%)
Query: 16 GSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVG 75
S N PTL+ +LT +A++G LDPV+GR +I RV+++L RRTKNNP LIGEPGVG
Sbjct: 154 ASKSNNTPTLDSLARDLTVIAKDGTLDPVIGRDKEITRVIEVLSRRTKNNPVLIGEPGVG 213
Query: 76 KTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDE 135
KTAIAEGLAQ I + +VP+T++ K+V++LDMG +VAGTKYRGEFEERLKK+MEEI+Q+
Sbjct: 214 KTAIAEGLAQAIVNNEVPETLKDKRVMSLDMGTVVAGTKYRGEFEERLKKVMEEIQQAGN 273
Query: 136 IILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERR 195
+ILFIDE+HTL+GAG AEGAIDA+NILKP+LARGELQCIGATTLDEYRK+IEKD ALERR
Sbjct: 274 VILFIDELHTLVGAGGAEGAIDASNILKPALARGELQCIGATTLDEYRKNIEKDAALERR 333
Query: 196 FQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAID 255
FQPV+V EPSV +T+ ILKGLR+RYE HH++ +DEA+ +A +LS +Y+SDRFLPDKAID
Sbjct: 334 FQPVQVDEPSVVDTVAILKGLRDRYEAHHRINISDEAIEAAVKLSNRYVSDRFLPDKAID 393
Query: 256 LIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQI 315
LIDEA S+VRL+ P +E+E+E+ ++ EK+ AV Q+FE A LRD++ L+ Q
Sbjct: 394 LIDEASSKVRLKSHTTPNNLKEIEQEIEKVKNEKDAAVHAQEFENAANLRDKQTKLEKQY 453
Query: 316 SALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLH 375
++ K + + ++E DI +++ WTGIP+ K++ ES++LL +E+TLH
Sbjct: 454 EEAKNEWKNAQNGMSTS------LSEEDIAEVIAGWTGIPLTKINETESEKLLSLEDTLH 507
Query: 376 KRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEE 435
+RVIGQ +AV +IS+A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+ALA FG ++
Sbjct: 508 ERVIGQKDAVNSISKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGDDD 567
Query: 436 AMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVF 495
AMIR+DMSEFME+H VS+L+G+PPGYVG+ +GGQLTE VRR+PY+V+LFDEIEKAHPDVF
Sbjct: 568 AMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKVRRKPYSVILFDEIEKAHPDVF 627
Query: 496 NMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNR 555
N++LQ+L+DG LTD+KGRTVDF+NT++IMTSNVG+ ++ R GF D +D Y
Sbjct: 628 NILLQVLDDGHLTDTKGRTVDFRNTIIIMTSNVGAQELQD-QRFAGFGGSSDGQD--YET 684
Query: 556 IKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVT 615
I+ + +ELK FRPEFLNR+D++IVF +LTK E+KEI +M+ ++ +RL ++I + VT
Sbjct: 685 IRKTMLKELKNSFRPEFLNRVDDIIVFHKLTKEELKEIVTMMVNKLTNRLSEQNINIIVT 744
Query: 616 ERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVD 666
++ ++++ EEGY+P YGARPL RAI + +ED+++E +L EG V VD
Sbjct: 745 DKAKDKIAEEGYDPEYGARPLIRAIQKTIEDNLSELILDGNQIEGKKVTVD 795
>gi|398309188|ref|ZP_10512662.1| genetic competence negative regulator ClpC/MecB [Bacillus
mojavensis RO-H-1]
Length = 810
Score = 798 bits (2060), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/667 (60%), Positives = 520/667 (77%), Gaps = 10/667 (1%)
Query: 9 VGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCL 68
G+ G +S PTL+ +LT +A+E LDPV+GR +I+RV+++L RRTKNNP L
Sbjct: 147 TGSSAAGTNSNANTPTLDSLARDLTAIAKEDSLDPVIGRSKEIQRVIEVLSRRTKNNPVL 206
Query: 69 IGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLME 128
IGEPGVGKTAIAEGLAQ+I + +VP+ + K+V+TLDMG +VAGTKYRGEFE+RLKK+M+
Sbjct: 207 IGEPGVGKTAIAEGLAQQIINNEVPEILRDKRVMTLDMGTVVAGTKYRGEFEDRLKKVMD 266
Query: 129 EIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEK 188
EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTLDEYRK+IEK
Sbjct: 267 EIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEYRKYIEK 326
Query: 189 DPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRF 248
D ALERRFQP++V +PSVDE+IQILKGLR+RYE HH++ TDEA+ +A +LS +YISDRF
Sbjct: 327 DAALERRFQPIQVDQPSVDESIQILKGLRDRYEAHHRVSITDEAIEAAVKLSDRYISDRF 386
Query: 249 LPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDRE 308
LPDKAIDLIDEAGS+VRLR P +ELE++L ++ KEK+ AV+ Q+FEKA LRD E
Sbjct: 387 LPDKAIDLIDEAGSKVRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFEKAASLRDTE 446
Query: 309 MDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLL 368
L+ Q+ KE + G V+ DI +VS+WTG+PV K++ E+D+LL
Sbjct: 447 QRLREQVEDTKKSWKE------KQGQENSEVSVDDIAMVVSSWTGVPVSKIAQTETDKLL 500
Query: 369 KMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAA 428
ME LH RVIGQDEAV A+++A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+ALA
Sbjct: 501 NMESILHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAE 560
Query: 429 YYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIE 488
FG EEAMIR+DMSE+ME+H+ S+L+GSPPGYVGY EGGQLTE VRR+PY+VVL DEIE
Sbjct: 561 SIFGDEEAMIRIDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPYSVVLLDEIE 620
Query: 489 KAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDE 548
KAHPDVFN++LQ+LEDGRLTDSKGRTVDF+NT+LIMTSNVG+S +++ + +GF++ +
Sbjct: 621 KAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTILIMTSNVGASELKR-NKYVGFNV--QD 677
Query: 549 KDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTK 608
+ ++ +K V ELK+ FRPEF+NR+DE+IVF L K + EI +M ++ RLK +
Sbjct: 678 ETQNHKDMKDKVMGELKRAFRPEFINRIDEIIVFHSLEKKHLAEIVSLMSDQLTKRLKEQ 737
Query: 609 DIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVD 668
D+ +++TE + +V EEG + YGARPLRRAI + +ED ++E++L I +G +++DV+
Sbjct: 738 DLSIELTEAAKAKVAEEGVDLEYGARPLRRAIQKHVEDRLSEELLRGNIHKGHHIVLDVE 797
Query: 669 SDGNVTV 675
DG V
Sbjct: 798 -DGEFVV 803
>gi|29831240|ref|NP_825874.1| ATP-dependent Clp protease [Streptomyces avermitilis MA-4680]
gi|29608355|dbj|BAC72409.1| putative ATP-dependent Clp protease [Streptomyces avermitilis
MA-4680]
Length = 841
Score = 798 bits (2060), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/693 (58%), Positives = 530/693 (76%), Gaps = 16/693 (2%)
Query: 3 GESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRT 62
G+ T A G G S + + L+++G NLT+ A E KLDPV+GR+ +IERV+Q+L RRT
Sbjct: 147 GKETAAAGGPAEGTPSTSLV--LDQFGRNLTQAARESKLDPVIGREKEIERVMQVLSRRT 204
Query: 63 KNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEER 122
KNNP LIGEPGVGKTA+ EGLAQ I G+VP+T++ K + TLD+G LVAG++YRG+FEER
Sbjct: 205 KNNPVLIGEPGVGKTAVVEGLAQAIVKGEVPETLKDKHLYTLDLGALVAGSRYRGDFEER 264
Query: 123 LKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEY 182
LKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEY
Sbjct: 265 LKKVLKEIRTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIGATTLDEY 324
Query: 183 RKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQ 242
RKH+EKD ALERRFQP++V EPS+ TI+ILKGLR+RYE HH++ TDEALV AA L+ +
Sbjct: 325 RKHLEKDAALERRFQPIQVAEPSLPHTIEILKGLRDRYEAHHRVSITDEALVQAATLADR 384
Query: 243 YISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAG 302
YISDRFLPDKAIDLIDEAGSR+R+R P + RE ++++ + ++K A+ QDFEKA
Sbjct: 385 YISDRFLPDKAIDLIDEAGSRMRIRRMTAPPDLREFDEKIAGVRRDKESAIDSQDFEKAA 444
Query: 303 ELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKV 359
LRD+E L A K + E +AGD+ VV EVD I +++ TGIPV K+
Sbjct: 445 SLRDKEKQLLA--------AKAKREKEWKAGDMD-VVAEVDGELIAEVLATATGIPVFKL 495
Query: 360 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 419
+ +ES RLL+ME+ LHKRVIGQ +AVKA+S+AIRR R GLK+P RP SFIF+GP+GVGK
Sbjct: 496 TEEESSRLLRMEDELHKRVIGQKDAVKALSKAIRRTRAGLKDPKRPGGSFIFAGPSGVGK 555
Query: 420 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 479
+EL+KALA + FG E+A+I LDMSEF E+HTVS+L GSPPGYVGY EGGQLTE VRR+P+
Sbjct: 556 TELSKALAEFLFGDEDALISLDMSEFSEKHTVSRLFGSPPGYVGYEEGGQLTEKVRRKPF 615
Query: 480 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 539
+VVLFDE+EKAHPD+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N+G+ I K G
Sbjct: 616 SVVLFDEVEKAHPDIFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNLGTRDISK-GFN 674
Query: 540 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 599
+GF D K S+Y R+K+ V +ELKQ+FRPEFLNR+D+++VF QLT+ ++ I D+M+
Sbjct: 675 LGFAAQGDTK-SNYERMKNKVADELKQHFRPEFLNRVDDVVVFPQLTQDDILRIVDLMIT 733
Query: 600 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 659
+V +RLK +D+ +++ + +E + ++GY+P GARPLRR I R +ED+++EK+L E++
Sbjct: 734 KVDERLKDRDMGIELAQSAKELLAKKGYDPVLGARPLRRTIQREIEDTLSEKILFGELRP 793
Query: 660 GDSVIVDVDSDGNVTVLNGSSGAPESLADPLPV 692
G V+VD + +G +L D P+
Sbjct: 794 GHIVVVDTEGEGETKTFTFRGEEKSALPDVPPI 826
>gi|253315634|ref|ZP_04838847.1| endopeptidase [Staphylococcus aureus subsp. aureus str.
CF-Marseille]
Length = 818
Score = 798 bits (2060), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/653 (58%), Positives = 511/653 (78%), Gaps = 9/653 (1%)
Query: 16 GSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVG 75
S N PTL+ +LT +A++G LDPV+GR +I RV+++L RRTKNNP LIGEPGVG
Sbjct: 154 ASKSNNTPTLDSLARDLTVIAKDGTLDPVIGRDKEITRVIEVLSRRTKNNPVLIGEPGVG 213
Query: 76 KTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDE 135
KTAIAEGLAQ I + +VP+T++ K+V++LDMG +VAGTKYRGEFEERLKK+MEEI+Q+
Sbjct: 214 KTAIAEGLAQAIVNNEVPETLKDKRVMSLDMGTVVAGTKYRGEFEERLKKVMEEIQQAGN 273
Query: 136 IILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERR 195
+ILFIDE+HTL+GAG AEGAIDA+NILKP+LARGELQCIGATTLDEYRK+IEKD ALERR
Sbjct: 274 VILFIDELHTLVGAGGAEGAIDASNILKPALARGELQCIGATTLDEYRKNIEKDAALERR 333
Query: 196 FQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAID 255
FQPV+V EPSV +T+ ILKGLR+RYE HH++ +DEA+ +A +LS +Y+SDRFLPDKAID
Sbjct: 334 FQPVQVDEPSVVDTVAILKGLRDRYEAHHRINISDEAIEAAVKLSNRYVSDRFLPDKAID 393
Query: 256 LIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQI 315
LIDEA S+VRL+ P +E+E+E+ ++ EK+ AV Q+FE A LRD++ L+ Q
Sbjct: 394 LIDEASSKVRLKSHTTPNNLKEIEQEIEKVKNEKDAAVHAQEFENAANLRDKQTKLEKQY 453
Query: 316 SALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLH 375
++ K + + ++E DI +++ WTGIP+ K++ ES++LL +E+TLH
Sbjct: 454 EEAKNEWKNAQNGMSTS------LSEEDIAEVIAGWTGIPLTKINETESEKLLSLEDTLH 507
Query: 376 KRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEE 435
+RVIGQ +AV +IS+A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+ALA FG ++
Sbjct: 508 ERVIGQKDAVNSISKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGDDD 567
Query: 436 AMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVF 495
AMIR+DMSEFME+H VS+L+G+PPGYVG+ +GGQLTE VRR+PY+V+LFDEIEKAHPDVF
Sbjct: 568 AMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKVRRKPYSVILFDEIEKAHPDVF 627
Query: 496 NMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNR 555
N++LQ+L+DG LTD+KGRTVDF+NT++IMTSNVG+ ++ R GF D +D Y
Sbjct: 628 NILLQVLDDGHLTDTKGRTVDFRNTIIIMTSNVGAQELQD-QRFAGFGGSSDGQD--YET 684
Query: 556 IKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVT 615
I+ + +ELK FRPEFLNR+D++IVF +LTK E+KEI +M+ ++ +RL ++I + VT
Sbjct: 685 IRKTMLKELKNSFRPEFLNRVDDIIVFHKLTKEELKEIVTMMVNKLTNRLFEQNINIIVT 744
Query: 616 ERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVD 668
++ ++++ EEGY+P YGARPL RAI + +ED+++E +L EG V VD D
Sbjct: 745 DKAKDKIAEEGYDPEYGARPLIRAIQKTIEDNLSELILDGNQIEGKKVTVDHD 797
>gi|403385695|ref|ZP_10927752.1| negative regulator of genetic competence clpC/mecB [Kurthia sp.
JC30]
Length = 820
Score = 798 bits (2060), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/664 (58%), Positives = 508/664 (76%), Gaps = 11/664 (1%)
Query: 23 PTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEG 82
PTL+ +LT++A EG LDPV+GR +I RV+++L RRTKNNP LIGEPGVGKTAIAEG
Sbjct: 164 PTLDSLARDLTQIAREGSLDPVIGRSKEITRVIEVLSRRTKNNPVLIGEPGVGKTAIAEG 223
Query: 83 LAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDE 142
LAQ+I + +VP+ + K+V+TLDMG +VAGTKYRGEFE+RLKK+M+EI+Q+ +ILFIDE
Sbjct: 224 LAQQIVNNEVPEILRDKRVMTLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNVILFIDE 283
Query: 143 VHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVP 202
+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTLDEYRK+IEKD ALERRFQP++V
Sbjct: 284 LHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEYRKYIEKDAALERRFQPIQVD 343
Query: 203 EPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGS 262
EP+ +E +QI++GLR+RYE HH+++ TDEA+ +A QLS +YISDRFLPDKAIDL+DEAGS
Sbjct: 344 EPTPEEAVQIIRGLRDRYEAHHRVKITDEAVEAAVQLSNRYISDRFLPDKAIDLMDEAGS 403
Query: 263 RVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKG 322
+VRLR P +ELE++L + EKN AV+ Q+FEKA LRD E +K ++ +
Sbjct: 404 KVRLRSYTTPPNLKELEQKLEAVKAEKNAAVQSQEFEKAANLRDSEQKIKEELETTKKEW 463
Query: 323 KE-MSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQ 381
KE ++E+E VT DI +V+ WTGIPV K++ +ES +LL +E+ LHKRV+GQ
Sbjct: 464 KEKQGRSESE-------VTVNDIAEVVAMWTGIPVAKIAQEESAKLLNLEDELHKRVVGQ 516
Query: 382 DEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLD 441
EAV+AISRAIRRAR GLK+P RPI SFIF GPTGVGK+ELA+ALA FG E++MIR+D
Sbjct: 517 GEAVEAISRAIRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAEVMFGDEDSMIRID 576
Query: 442 MSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQI 501
MSE+ME+H+ S+L+GSPPGYVGY EGGQLTE VRR+PY+VVL DEIEKAHPDVFN++LQ+
Sbjct: 577 MSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQV 636
Query: 502 LEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVT 561
L+DGRLTDSKGR VDF+NT++IMTSN+G+ + K + +GF E S K ++
Sbjct: 637 LDDGRLTDSKGRVVDFRNTVVIMTSNIGAEAL-KYRKSVGF--GAQETSKSEANAKDVML 693
Query: 562 EELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRER 621
EELK+ FRPEFLNR+DE IVF L K E+ EI M ++ RL ++IEL++T+ ++
Sbjct: 694 EELKKAFRPEFLNRIDETIVFHSLKKDELAEIVGKMSDQLTKRLSEQNIELELTKAALDK 753
Query: 622 VVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNGSSG 681
+ EGY+P YGARP+RRA+ + +ED ++E++L + G V+ D D S
Sbjct: 754 IAAEGYDPEYGARPIRRALQKHVEDRLSEEILKGTVLTGQVVVFDYKDDEFTVTTKKSKK 813
Query: 682 APES 685
P +
Sbjct: 814 EPAT 817
>gi|399889691|ref|ZP_10775568.1| negative regulator of genetic competence mecB/clpC [Clostridium
arbusti SL206]
Length = 813
Score = 798 bits (2060), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/648 (58%), Positives = 519/648 (80%), Gaps = 7/648 (1%)
Query: 23 PTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEG 82
P L+++G +LT +A EGKLDPV+GR + +RV++IL RRTKNNPCLIG+PGVGKTAIAEG
Sbjct: 166 PALDQFGRDLTVMASEGKLDPVIGRDGETQRVLEILCRRTKNNPCLIGDPGVGKTAIAEG 225
Query: 83 LAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDE 142
LAQRI SG++P+ ++ K+V+TLD+ +VAG+KYRGEFEERLK++M EI+ S +I+FIDE
Sbjct: 226 LAQRIVSGNIPEILKDKRVVTLDISSMVAGSKYRGEFEERLKRVMTEIRNSGNVIIFIDE 285
Query: 143 VHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVP 202
+HT+IGAG AEGAIDA+NILKPSLARGE+QCIGATT+DEYRK+IEKD ALERRFQPV V
Sbjct: 286 IHTIIGAGGAEGAIDASNILKPSLARGEIQCIGATTIDEYRKYIEKDSALERRFQPVTVG 345
Query: 203 EPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGS 262
EPS +E + IL+GLR++YE HH+++ TD+AL +A L+ +YI+DR+LPDKAIDLIDEAG+
Sbjct: 346 EPSKEEAVLILRGLRDKYEAHHRVKITDDALEAAVNLADRYITDRYLPDKAIDLIDEAGA 405
Query: 263 RVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKG 322
+VR+ + P + + E+EL + KEK +A+R QDFEKA LRD+E +LK +I
Sbjct: 406 KVRIENLTAPPDLKNQEEELEKTEKEKADAIRLQDFEKAARLRDKEKELKGKIEDFKKNW 465
Query: 323 KEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQD 382
K + +V+E I +V+ W IPVEK++ ES++LLK+EE LHKRVIGQ+
Sbjct: 466 KNRKDVQNH------IVSETQIAAVVAKWANIPVEKLTEKESEKLLKLEEILHKRVIGQN 519
Query: 383 EAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDM 442
EAVK++SRA+RRARVGLK+P RPI SFIF GPTGVGK+EL+KALA FG E ++IR+DM
Sbjct: 520 EAVKSVSRAVRRARVGLKDPKRPIGSFIFLGPTGVGKTELSKALAEAMFGDESSIIRIDM 579
Query: 443 SEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQIL 502
SE+ME+HTVS+LIGSPPGYVG+ +GGQLTE VRR+PY+VVLFDEIEKAHPDVFN++LQIL
Sbjct: 580 SEYMEKHTVSRLIGSPPGYVGFDDGGQLTEKVRRKPYSVVLFDEIEKAHPDVFNILLQIL 639
Query: 503 EDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTE 562
EDGRLTD KG+TV+F+NT++I+TSNVG+S I++ + +GF + DE + Y ++K + +
Sbjct: 640 EDGRLTDGKGKTVNFQNTIIILTSNVGASTIKR-QKSLGFSVSNDETEDEYEKMKDNIMD 698
Query: 563 ELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERV 622
ELK+ FRPEFLNR+D++IVF QL + +++E+ +ML+ V RL +DI ++ TE + +
Sbjct: 699 ELKRSFRPEFLNRIDDIIVFHQLLEEDLQEVVKLMLESVSSRLNDQDINIKFTEEAEKLL 758
Query: 623 VEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSD 670
++G++P+YGARPLRRAI +++ED +AE++L + +GD+V V V+ +
Sbjct: 759 AKKGFDPTYGARPLRRAITKIVEDKIAEEILNGSLHKGDNVSVTVNEN 806
>gi|330850854|ref|YP_004376604.1| Clp-family ATP-binding protease [Fistulifera sp. JPCC DA0580]
gi|328835674|dbj|BAK18970.1| Clp-family ATP-binding protease [Fistulifera sp. JPCC DA0580]
Length = 922
Score = 797 bits (2059), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/672 (58%), Positives = 511/672 (76%), Gaps = 31/672 (4%)
Query: 19 GNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTA 78
G+ PTL+EY N+TK A EG LDPV+GR+ +I+ V+ +L RRTKNNP LIGEPGVGKTA
Sbjct: 167 GSPTPTLDEYAENITKEAIEGNLDPVIGREKEIDDVIAVLARRTKNNPVLIGEPGVGKTA 226
Query: 79 IAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIIL 138
+AEGLAQ I + VPD ++G ++ LD+G ++AGTKYRGEFEERLK+++EE + +I+
Sbjct: 227 VAEGLAQLILTEKVPDFLDGSLIMALDLGSILAGTKYRGEFEERLKRIVEEAQNDSAVII 286
Query: 139 FIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQP 198
IDE+HTL+GAGAAEGA+DAANILKP+LARG+ +CIGATT DEYRK+IE+DPALERRFQP
Sbjct: 287 VIDEIHTLVGAGAAEGAVDAANILKPALARGKFRCIGATTNDEYRKYIERDPALERRFQP 346
Query: 199 VKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLID 258
V V EPSV TI+IL+GLR ++E HH L Y D+AL AA LS +Y++DR+LPDKAID++D
Sbjct: 347 VHVEEPSVGTTIEILRGLRSKFEQHHTLSYHDKALEQAAILSDKYVADRYLPDKAIDVLD 406
Query: 259 EAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQI--- 315
EAG+RVRL + +LP R L EL++ K+K + ++ DFE A +L D EM+++ I
Sbjct: 407 EAGARVRLENRRLPLGLRSLMHELQETIKDKEDCIKEHDFEAAKQLLDHEMEVRTHIRIM 466
Query: 316 --SALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEET 373
SAL + + S+ + + +VTE D+ +VS WTGIPV K++ ES RLLKME+T
Sbjct: 467 KQSALTSEARGFSRRDVD------MVTETDVSDVVSNWTGIPVTKITGSESARLLKMEDT 520
Query: 374 LHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGS 433
+H+R+IGQ AVKA+SRAIRRARVGL+NPNRPIASFIF+GPTGVGK+EL KALA Y F S
Sbjct: 521 IHERIIGQQHAVKAVSRAIRRARVGLRNPNRPIASFIFAGPTGVGKTELTKALADYMFAS 580
Query: 434 EEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPD 493
E++MIRLDMSE+ME+HTV+KLIGSPPGYVGY EGGQLTEAVR +PY+VVL DE+EKAHPD
Sbjct: 581 EDSMIRLDMSEYMEKHTVAKLIGSPPGYVGYNEGGQLTEAVRSKPYSVVLLDEVEKAHPD 640
Query: 494 VFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEK------------GGRRIG 541
VFN++LQIL+DGRLTDSKGR +DF NTL+IMT+N+G+ +IE+ GG +I
Sbjct: 641 VFNLLLQILDDGRLTDSKGRLIDFTNTLIIMTTNLGAKIIERESGIKPKSEQGEGGFKIT 700
Query: 542 FD-------LDYDEKDSS-YNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEI 593
D + KD + R+ LV +ELK +FRPEFLNR+DE+IVF LT++++ EI
Sbjct: 701 PDAVVGWEPMPEPIKDPELFERVTKLVNDELKNFFRPEFLNRIDEIIVFNHLTRIDIWEI 760
Query: 594 ADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKML 653
D+M+K+V RLK K I L V + + +EGY+P YGARPLRRAIM+ LED++AE+ L
Sbjct: 761 CDLMVKQVQKRLKEKGINLIVDLSVQAFLTDEGYDPLYGARPLRRAIMKYLEDTLAEQCL 820
Query: 654 AREIKEGDSVIV 665
++ + + V
Sbjct: 821 SKTLYPNTKIYV 832
>gi|425446237|ref|ZP_18826247.1| ATP-dependent Clp protease ATP-binding subunit clpA homolog
[Microcystis aeruginosa PCC 9443]
gi|389733621|emb|CCI02634.1| ATP-dependent Clp protease ATP-binding subunit clpA homolog
[Microcystis aeruginosa PCC 9443]
Length = 795
Score = 797 bits (2059), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 388/651 (59%), Positives = 497/651 (76%), Gaps = 45/651 (6%)
Query: 25 LEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLA 84
L +Y NL++ + GK+DPV+GR+P+I+RV+QILGRR KNNP L+G PGVGKTAIAEGLA
Sbjct: 169 LAQYSRNLSQEVKNGKIDPVIGREPEIQRVIQILGRRGKNNPILLGAPGVGKTAIAEGLA 228
Query: 85 QRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVH 144
QRI +GD+P+ + K+VI LDMG L+AGT++RG+FEERLK ++EE+++S IILFIDE+H
Sbjct: 229 QRIHNGDIPELLRDKQVIALDMGSLLAGTRFRGDFEERLKGVVEEVRKSGSIILFIDEIH 288
Query: 145 TLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEP 204
TL+GAG+ GA+DA+N+LKP+LARGELQC+GATTLDEY++HIE+D ALERRFQPV V EP
Sbjct: 289 TLVGAGSMGGAMDASNLLKPALARGELQCLGATTLDEYKQHIERDAALERRFQPVMVGEP 348
Query: 205 SVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRV 264
+ ++ I+IL+GL+ YE H+++Y +A+ +A LS +YI+DRFLPDKAIDL+DEAGSR
Sbjct: 349 TKEQAIEILRGLKATYEDFHQVKYAQKAIEAAVHLSSRYINDRFLPDKAIDLLDEAGSRT 408
Query: 265 RLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKE 324
LR++ + E+ +E I E +L+
Sbjct: 409 HLRYSLQSKSPAEVNEESPLINPE----------------------------SLI----- 435
Query: 325 MSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEA 384
PVV +I IV+AWTGIPV +++ ES+ LL +E LH+R+IGQ EA
Sbjct: 436 ------------PVVDAEEIAQIVAAWTGIPVTQLTETESESLLNLEYQLHERIIGQQEA 483
Query: 385 VKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSE 444
V A+SRAIRRARV LKNPNRPIASFIF+GPTGVGK+EL KALA FGSE +MIRLDMSE
Sbjct: 484 VNAVSRAIRRARVNLKNPNRPIASFIFAGPTGVGKTELTKALAKLLFGSESSMIRLDMSE 543
Query: 445 FMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILED 504
FME HTVSKLIG+PPGY+GY EGGQLTEAVRR+PY VVLFDEIEKAHPDVFN++LQ+LED
Sbjct: 544 FMESHTVSKLIGAPPGYIGYNEGGQLTEAVRRQPYKVVLFDEIEKAHPDVFNLLLQLLED 603
Query: 505 GRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEEL 564
GRLTDS+GR VDFKNTL+IMTSN+GS VIEKGG +GF++ D S Y +I + VT+EL
Sbjct: 604 GRLTDSQGRRVDFKNTLIIMTSNIGSKVIEKGGNSLGFEMADDFAQSRYQQISNRVTDEL 663
Query: 565 KQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVE 624
KQYFRPEFLNRLDE+IVFRQLT+ EV +IADI++ ++ +L K I ++VT F++ V+
Sbjct: 664 KQYFRPEFLNRLDEIIVFRQLTREEVTQIADILIADLGKQLTEKGISVEVTAAFKDLVIN 723
Query: 625 EGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTV 675
EGY+PSYGARPLRRA+ R LEDS+AE ML+ ++ GD ++DV ++ VTV
Sbjct: 724 EGYDPSYGARPLRRALTRRLEDSLAEAMLSGKVNSGDHALLDVTAEAVVTV 774
>gi|418614178|ref|ZP_13177162.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU118]
gi|374821459|gb|EHR85520.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU118]
Length = 817
Score = 797 bits (2059), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 384/653 (58%), Positives = 511/653 (78%), Gaps = 9/653 (1%)
Query: 16 GSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVG 75
+ N PTL+ +LT +A++G LDPVVGR +I RV+++L RRTKNNP LIGEPGVG
Sbjct: 154 ANKSNNTPTLDGLARDLTVIAKDGTLDPVVGRDKEITRVIEVLSRRTKNNPVLIGEPGVG 213
Query: 76 KTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDE 135
KTAIAEGLAQ I +VP+T++ K+V++LDMG +VAGTKYRGEFEERLKK+MEEI Q+
Sbjct: 214 KTAIAEGLAQAIVKNEVPETLKDKRVMSLDMGTVVAGTKYRGEFEERLKKVMEEIHQAGN 273
Query: 136 IILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERR 195
+ILFIDE+HTL+GAG AEGAIDA+NILKP+LARGELQCIGATTLDEYRK+IEKD ALERR
Sbjct: 274 VILFIDELHTLVGAGGAEGAIDASNILKPALARGELQCIGATTLDEYRKNIEKDAALERR 333
Query: 196 FQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAID 255
FQP++V EP+V++TI+ILKGL +RYE HH++ +DEAL +AA+LS +Y+SDRFLPDKAID
Sbjct: 334 FQPIQVDEPTVEDTIEILKGLCDRYEAHHRINISDEALEAAAKLSDRYVSDRFLPDKAID 393
Query: 256 LIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQI 315
LIDEA S+VRL+ P +E+E+E+ ++ EK+ AV Q+FE A LRD++ L+ Q
Sbjct: 394 LIDEASSKVRLKSHTTPSNLKEIEQEIDKVKNEKDAAVHAQEFENAANLRDKQSKLEKQY 453
Query: 316 SALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLH 375
D E A+ G + ++E +I +++ WTGIP+ K++ ESDRLL +E+TLH
Sbjct: 454 E---DAKNEWKNAQ---GGLDTALSEENIAEVIAGWTGIPLTKINETESDRLLNLEDTLH 507
Query: 376 KRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEE 435
KRVIGQ++AV +IS+A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+ALA FG ++
Sbjct: 508 KRVIGQNDAVNSISKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGEDD 567
Query: 436 AMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVF 495
AMIR+DMSEFME+H VS+L+G+PPGYVG+ +GGQLTE VRR+PY+V+LFDEIEKAHPDVF
Sbjct: 568 AMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKVRRKPYSVILFDEIEKAHPDVF 627
Query: 496 NMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNR 555
N++LQ+L+DG LTD+KGRTVDF+NT++IMTSNVG+ ++ R GF + S Y
Sbjct: 628 NILLQVLDDGHLTDTKGRTVDFRNTVIIMTSNVGAQELQD-QRFAGF--GGASEGSDYET 684
Query: 556 IKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVT 615
++ + +ELK FRPEFLNR+D++IVF +LTK E+KEI +M+ ++ RL ++I + VT
Sbjct: 685 VRKTMMKELKNSFRPEFLNRVDDIIVFHKLTKDELKEIVTMMVNKLTHRLSEQNINIVVT 744
Query: 616 ERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVD 668
++ +E++ EEGY+P YGARPL RAI + +ED+++E +L EG V +D D
Sbjct: 745 DKAKEKIAEEGYDPEYGARPLIRAIQKTVEDNLSELILDGNKIEGKEVTIDHD 797
>gi|386774044|ref|ZP_10096422.1| ATPase with chaperone activity, ATP-binding subunit
[Brachybacterium paraconglomeratum LC44]
Length = 862
Score = 797 bits (2058), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/691 (58%), Positives = 532/691 (76%), Gaps = 20/691 (2%)
Query: 11 AGVGGGSSGNKMPTL--EEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCL 68
A GG S G +L +++G NLT+ A +GKLDPV+GR+ + ERV+Q+L RRTKNNP L
Sbjct: 151 ANAGGPSEGQPSGSLVLDQFGRNLTQAARDGKLDPVIGRESEAERVMQVLSRRTKNNPVL 210
Query: 69 IGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLME 128
IGEPGVGK+A+ EGLAQ I +GDVP+T++ K++ TLD+G LVAG++YRG+FEERLKK+++
Sbjct: 211 IGEPGVGKSAVVEGLAQSIVAGDVPETLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLK 270
Query: 129 EIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEK 188
EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTL+EYRKHIEK
Sbjct: 271 EIRTRGDIILFIDEIHTLVGAGAAEGAIDAASILKPMLARGELQTIGATTLEEYRKHIEK 330
Query: 189 DPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRF 248
D ALERRFQP++V EPSV T++ILKGLR+RYE HHK+ TD ALV+AA L+ +Y++DRF
Sbjct: 331 DAALERRFQPIQVDEPSVAHTVEILKGLRDRYEAHHKVTITDSALVAAANLADRYVNDRF 390
Query: 249 LPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDRE 308
LPDKAIDLIDEAG+R+R+R P E +E + + + K+K EA+ GQDFE A LRD E
Sbjct: 391 LPDKAIDLIDEAGARLRIRRLTAPPELKEFDSRIEEARKKKEEAIDGQDFELAANLRDEE 450
Query: 309 MDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLL 368
LK++ +K K E++A V V EV I +++A TGIP+ K++ +ES RLL
Sbjct: 451 QKLKSERD---EKEKAWRHGESDA--VTTVSEEV-IAEVLAASTGIPIVKLTEEESSRLL 504
Query: 369 KMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAA 428
ME+ LHKRVIGQDEA+KAISRAIRR R GLK+P RP SFIF+GPTGVGK+ELAKALA
Sbjct: 505 NMEDELHKRVIGQDEAIKAISRAIRRTRAGLKDPKRPGGSFIFAGPTGVGKTELAKALAE 564
Query: 429 YYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIE 488
+ FG EEA+I+LDMSEF E+HT S+L GSPPGYVGY EGGQLTE VRR+P++VVLFDE+E
Sbjct: 565 FLFGDEEALIQLDMSEFGEKHTASRLFGSPPGYVGYDEGGQLTEKVRRKPFSVVLFDEVE 624
Query: 489 KAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKG---GRRIGFDLD 545
KAH D+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N+G+ I KG G G DL
Sbjct: 625 KAHVDIFNSLLQILEDGRLTDSQGRVVDFKNTIIIMTTNLGTRDIAKGVSMGFTAGGDLS 684
Query: 546 YDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRL 605
D Y R+KS V EELKQ+F+PEFLNR+D+++VF QL++ E+ +I D+ + ++ RL
Sbjct: 685 TD-----YERMKSKVHEELKQHFKPEFLNRVDDVVVFPQLSRTEIIQIVDLEVAKLSRRL 739
Query: 606 KTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIV 665
+ +D+ L++T+ ++ + E+GY+P GARPLRR I R +EDS++E++L +++ GD ++V
Sbjct: 740 QDRDMTLELTQPAKDLLAEKGYDPVLGARPLRRTIQRDIEDSLSERILFGQVQVGDQIVV 799
Query: 666 DVDSDGNVTVLN----GSSGAPESLADPLPV 692
D + +G + L G G+ E ++D + V
Sbjct: 800 DAEGEGLLGDLTFARRGEDGSLEPISDVVDV 830
>gi|418954707|ref|ZP_13506663.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus IS-189]
gi|375372472|gb|EHS76212.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus IS-189]
Length = 818
Score = 797 bits (2058), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/653 (58%), Positives = 510/653 (78%), Gaps = 9/653 (1%)
Query: 16 GSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVG 75
S N PTL+ +LT +A++G LDPV+GR +I RV+++L RRTKNNP LIGEPGVG
Sbjct: 154 ASKSNNTPTLDSLARDLTVIAKDGTLDPVIGRDKEITRVIEVLSRRTKNNPVLIGEPGVG 213
Query: 76 KTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDE 135
KTAIAEGLAQ I + +VP+T++ K+V++LDMG +VAGTKYRGEFEERLKK+MEEI+Q+
Sbjct: 214 KTAIAEGLAQAIVNNEVPETLKDKRVMSLDMGTVVAGTKYRGEFEERLKKVMEEIQQAGN 273
Query: 136 IILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERR 195
+ILFIDE+HTL+GAG AEGAIDA+NILKP+LARGELQCIGATTLDEYRK+IEKD ALERR
Sbjct: 274 VILFIDELHTLVGAGGAEGAIDASNILKPALARGELQCIGATTLDEYRKNIEKDAALERR 333
Query: 196 FQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAID 255
FQPV+V EPSV +T+ ILKGLR+RYE HH++ +DEA+ +A +LS +Y+SDRFLPDKAID
Sbjct: 334 FQPVQVDEPSVVDTVAILKGLRDRYEAHHRINISDEAIEAAVKLSNRYVSDRFLPDKAID 393
Query: 256 LIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQI 315
LIDEA S+VRL+ P +E+E+E+ ++ EK+ AV Q+FE A LRD++ L+ Q
Sbjct: 394 LIDEASSKVRLKSHTTPNNLKEIEQEIEKVKNEKDAAVHAQEFENAANLRDKQTKLEKQY 453
Query: 316 SALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLH 375
++ K + + ++E DI +++ WTGIP+ K++ ES++LL +E+TLH
Sbjct: 454 EEAKNEWKNAQNGMSTS------LSEEDIAEVIAGWTGIPLTKINETESEKLLSLEDTLH 507
Query: 376 KRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEE 435
+RVIGQ +AV +IS+A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+ALA FG ++
Sbjct: 508 ERVIGQKDAVNSISKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGDDD 567
Query: 436 AMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVF 495
AMIR+DMSEFME+H VS+L+G+PPGYVG+ +GGQLTE VRR+PY+V+LFDEIEKAHPDVF
Sbjct: 568 AMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKVRRKPYSVILFDEIEKAHPDVF 627
Query: 496 NMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNR 555
N++LQ+L+DG LTD+KGRTVDF+NT++IMTSNVG+ ++ R GF D +D Y
Sbjct: 628 NILLQVLDDGHLTDTKGRTVDFRNTIIIMTSNVGAQELQD-QRFAGFGGSSDGQD--YET 684
Query: 556 IKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVT 615
I+ + +ELK FRPEFLNR+D++IVF +LTK E+KEI +M+ ++ +RL ++I + VT
Sbjct: 685 IRKTMLKELKNSFRPEFLNRVDDIIVFHKLTKEELKEIVTMMVNKLTNRLSEQNINIIVT 744
Query: 616 ERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVD 668
++ ++++ EEGY+P YG RPL RAI + +ED+++E +L EG V VD D
Sbjct: 745 DKAKDKIAEEGYDPEYGTRPLIRAIQKTIEDNLSELILDGNQIEGKKVTVDHD 797
>gi|168181833|ref|ZP_02616497.1| negative regulator of genetic competence MecB/ClpC [Clostridium
botulinum Bf]
gi|237796972|ref|YP_002864524.1| negative regulator of genetic competence MecB/ClpC [Clostridium
botulinum Ba4 str. 657]
gi|182674884|gb|EDT86845.1| negative regulator of genetic competence MecB/ClpC [Clostridium
botulinum Bf]
gi|229263581|gb|ACQ54614.1| putative negative regulator of genetic competence MecB/ClpC
[Clostridium botulinum Ba4 str. 657]
Length = 811
Score = 797 bits (2058), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/649 (59%), Positives = 526/649 (81%), Gaps = 8/649 (1%)
Query: 23 PTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEG 82
PTL+++G +LT++AEEGK+DPV+GR + +RV++IL RRTKNNPCLIGEPGVGKTAIAEG
Sbjct: 163 PTLDQFGRDLTEMAEEGKVDPVIGRDKETQRVLEILCRRTKNNPCLIGEPGVGKTAIAEG 222
Query: 83 LAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDE 142
LAQ I +G++P+ ++ K+V+TLD+ ++AG KYRGEFE+RLKK+MEE++ S + ILFIDE
Sbjct: 223 LAQNIINGNIPEILKNKRVVTLDLTSMIAGAKYRGEFEDRLKKIMEEVRSSKDTILFIDE 282
Query: 143 VHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVP 202
+HT++GAGAAEGAIDAANILKP+LARGE+QCIGATTLDEYRK+IEKD ALERRFQP+ V
Sbjct: 283 IHTIVGAGAAEGAIDAANILKPALARGEIQCIGATTLDEYRKYIEKDSALERRFQPINVG 342
Query: 203 EPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGS 262
EP+ +ETI+ILKGLR++YE HH++++TD+A+ +A LS +YI DRFLPDKAIDL+DEAGS
Sbjct: 343 EPTKEETIEILKGLRDKYEAHHRVKFTDDAIYAAVNLSDRYIRDRFLPDKAIDLMDEAGS 402
Query: 263 RVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKG 322
+VR+++ P + + +E++L ++ KEK +A+R QDFEKA LRD+E +LK ++ L
Sbjct: 403 KVRIQNLIAPPDLKNIEEQLDKVVKEKEDAIRVQDFEKAANLRDKEKELKEKLEGLKKDW 462
Query: 323 KEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQD 382
AE E ++ +V+E I +VS WT IPV K++ ES+RLLK+E+ LH RVIGQ+
Sbjct: 463 ----NAEKEGSNL--IVSEQQIAAVVSNWTNIPVNKLTEKESERLLKLEDILHNRVIGQE 516
Query: 383 EAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDM 442
EA+K++SR++RRARVGLK+P RPI SFIF GPTGVGK+EL KALA FG+E MIR+DM
Sbjct: 517 EAIKSVSRSVRRARVGLKDPKRPIGSFIFLGPTGVGKTELTKALAEAMFGNENNMIRVDM 576
Query: 443 SEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQIL 502
SE+ME+H+VS+LIGSPPGYVG+ EGGQLT+ VR PY+VVLFDEIEKAHP+VFN++LQIL
Sbjct: 577 SEYMEKHSVSRLIGSPPGYVGHDEGGQLTDKVRTNPYSVVLFDEIEKAHPEVFNILLQIL 636
Query: 503 EDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDY-DEKDSSYNRIKSLVT 561
EDGRLTD KG+TVDF+NT++IMTSNVG+S I + + +GF+ +E+++ Y ++K +
Sbjct: 637 EDGRLTDGKGKTVDFRNTIIIMTSNVGASTISR-QKTLGFNTSIEEERETEYEKMKDNIM 695
Query: 562 EELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRER 621
ELK FRPEFLNR+D++IVF QL + ++EI +MLK V +R+K + IEL+ TE +
Sbjct: 696 NELKHSFRPEFLNRIDDIIVFHQLREEHIREIVKLMLKTVSNRVKDQGIELEFTEEAEKI 755
Query: 622 VVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSD 670
+ +EGY+ +YGARPLRRAI +++ED ++E++L IK+GDSV V+ D
Sbjct: 756 LAKEGYDTNYGARPLRRAITKIVEDKLSEEILKGNIKKGDSVKVNTIED 804
>gi|418282574|ref|ZP_12895339.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21202]
gi|365169575|gb|EHM60821.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21202]
Length = 818
Score = 797 bits (2058), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/653 (58%), Positives = 510/653 (78%), Gaps = 9/653 (1%)
Query: 16 GSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVG 75
S N PTL+ +LT +A++G LDPV+GR +I RV+++L RRTKNNP LIGEPGVG
Sbjct: 154 ASKSNNTPTLDNLARDLTVIAKDGTLDPVIGRDKEITRVIEVLSRRTKNNPVLIGEPGVG 213
Query: 76 KTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDE 135
KTAIAEGLAQ I + +VP+T++ K+V++LDMG +VAGTKYRGEFEERLKK+MEEI+Q+
Sbjct: 214 KTAIAEGLAQAIVNNEVPETLKDKRVMSLDMGTVVAGTKYRGEFEERLKKVMEEIQQAGN 273
Query: 136 IILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERR 195
+ILFIDE+HTL+GAG AEGAIDA+NILKP+LARGELQCIGATTLDEYRK+IEKD ALERR
Sbjct: 274 VILFIDELHTLVGAGGAEGAIDASNILKPALARGELQCIGATTLDEYRKNIEKDAALERR 333
Query: 196 FQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAID 255
FQPV+V EPSV +T+ ILKGLR+RYE HH++ +DEA+ +A +LS +Y+SDRFLPDKAID
Sbjct: 334 FQPVQVDEPSVVDTVAILKGLRDRYEAHHRINISDEAIEAAVKLSNRYVSDRFLPDKAID 393
Query: 256 LIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQI 315
LIDEA S+VRL+ P +E+E+E+ ++ EK+ AV Q+FE A LRD++ L+ Q
Sbjct: 394 LIDEASSKVRLKSHTTPNNLKEIEQEIEKVKNEKDAAVHAQEFENAANLRDKQTKLEKQY 453
Query: 316 SALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLH 375
++ K + + ++E DI +++ WTGIP+ K++ ES++LL +E+ LH
Sbjct: 454 EEAKNEWKNAQNGMSTS------LSEEDIAEVIAGWTGIPLTKINETESEKLLSLEDALH 507
Query: 376 KRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEE 435
+RVIGQ +AV +IS+A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+ALA FG ++
Sbjct: 508 ERVIGQKDAVNSISKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGDDD 567
Query: 436 AMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVF 495
AMIR+DMSEFME+H VS+L+G+PPGYVG+ +GGQLTE VRR+PY+V+LFDEIEKAHPDVF
Sbjct: 568 AMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKVRRKPYSVILFDEIEKAHPDVF 627
Query: 496 NMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNR 555
N++LQ+L+DG LTD+KGRTVDF+NT++IMTSNVG+ ++ R GF D +D Y
Sbjct: 628 NILLQVLDDGHLTDTKGRTVDFRNTIIIMTSNVGAQELQD-QRFAGFGGSSDGQD--YET 684
Query: 556 IKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVT 615
I+ + +ELK FRPEFLNR+D++IVF +LTK E+KEI +M+ ++ +RL ++I + VT
Sbjct: 685 IRKTMLKELKNSFRPEFLNRVDDIIVFHKLTKEELKEIVTMMVNKLTNRLSEQNINIIVT 744
Query: 616 ERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVD 668
++ ++++ EEGY+P YGARPL RAI + +ED+++E +L EG V VD D
Sbjct: 745 DKAKDKIAEEGYDPEYGARPLIRAIQKTIEDNLSELILDGNQIEGKKVTVDHD 797
>gi|405979476|ref|ZP_11037819.1| hypothetical protein HMPREF9241_00542 [Actinomyces turicensis
ACS-279-V-Col4]
gi|404391892|gb|EJZ86953.1| hypothetical protein HMPREF9241_00542 [Actinomyces turicensis
ACS-279-V-Col4]
Length = 822
Score = 797 bits (2058), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 398/675 (58%), Positives = 532/675 (78%), Gaps = 16/675 (2%)
Query: 3 GESTEAVGAGVGGGSSGNKMPT--LEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
GE E+VGAGVGG S+ + + LE++G NLT+ A + KLDPV+GR+ ++ERV+Q+L R
Sbjct: 150 GEGRESVGAGVGGSSTHERQNSAVLEQFGRNLTQAARDNKLDPVIGRRVEMERVMQVLSR 209
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNP LIGEPGVGKTA+ EGLAQ I GDVP+TI+ +++ +LDMG LVAG++YRG+FE
Sbjct: 210 RTKNNPVLIGEPGVGKTAVVEGLAQAIVHGDVPETIKDRQIYSLDMGSLVAGSRYRGDFE 269
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
ERLKK+++EI+ +IILFIDE+HTL+GAGAAEG+IDAA +LKP LARGELQ IGATT D
Sbjct: 270 ERLKKVLKEIRTRGDIILFIDEIHTLVGAGAAEGSIDAAQMLKPMLARGELQTIGATTND 329
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRK+IEKD ALERRFQPVKV EPSV++TI+ILKGLR+RYE HH++ TDEA+ +AA+L+
Sbjct: 330 EYRKYIEKDAALERRFQPVKVDEPSVEDTIEILKGLRDRYEAHHRVIITDEAIKAAAELA 389
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
+YISDRFLPDKAIDL+DEAG+R+R+R P E REL++++ ++ + K A+ QDFEK
Sbjct: 390 DRYISDRFLPDKAIDLVDEAGARLRIRRMTAPPELRELDEKIAEVRRNKESAIDDQDFEK 449
Query: 301 AGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVS 360
A LRD E +L AQ + KE S E+ + VTE +I +++ TGIPV K++
Sbjct: 450 AAGLRDEESNLVAQ-----REEKETSWKGGESDSIAE-VTEEEIAEVLAMSTGIPVFKLT 503
Query: 361 TDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 420
E+ +LLKME+ LHKRVIGQ+EAV+A+S++IRR R GLK+PNRP SFIF+GPTGVGK+
Sbjct: 504 QTETTKLLKMEDELHKRVIGQEEAVRALSQSIRRTRSGLKDPNRPGGSFIFAGPTGVGKT 563
Query: 421 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 480
ELAKALA + FG E+A+I+LDMSEF E+HT S+L G+PPGYVGY EGGQLTE VRR+P++
Sbjct: 564 ELAKALAEFLFGDEDALIQLDMSEFSEKHTASRLFGAPPGYVGYDEGGQLTEKVRRKPFS 623
Query: 481 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKG---G 537
VVLFDE+EKAHPD+FN +LQILE+GRLTDS+GR VDFKNT++IMT+N+G+ I KG G
Sbjct: 624 VVLFDEVEKAHPDIFNSLLQILEEGRLTDSQGRKVDFKNTVIIMTTNLGTRDINKGVLTG 683
Query: 538 RRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIM 597
+ +L +D Y+R+K+ V EELKQ+FRPEFLNR+D+ IVF L K ++K+I D+M
Sbjct: 684 FQSADNLTHD-----YSRMKAKVDEELKQHFRPEFLNRVDDTIVFPPLNKDQIKQIVDLM 738
Query: 598 LKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREI 657
+ ++ R++ +D+ LQ+T+ R+ + + G++P GARPLRRAI R +ED+++E++L EI
Sbjct: 739 IAKLAKRMEAQDMHLQLTDEARDLLADLGFDPVLGARPLRRAIQREIEDALSERILFGEI 798
Query: 658 KEGDSVIVDVDSDGN 672
G V V V+ +G+
Sbjct: 799 VAGQVVTVGVEGEGS 813
>gi|339006576|ref|ZP_08639151.1| negative regulator of genetic competence ClpC/MecB [Brevibacillus
laterosporus LMG 15441]
gi|421875241|ref|ZP_16306835.1| negative regulator of genetic competence ClpC/MecB [Brevibacillus
laterosporus GI-9]
gi|338775785|gb|EGP35313.1| negative regulator of genetic competence ClpC/MecB [Brevibacillus
laterosporus LMG 15441]
gi|372455709|emb|CCF16384.1| negative regulator of genetic competence ClpC/MecB [Brevibacillus
laterosporus GI-9]
Length = 820
Score = 797 bits (2058), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 394/675 (58%), Positives = 531/675 (78%), Gaps = 10/675 (1%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
++G S G ++ PTL+ +LT +A+EG LDPV+GRQ +IERV+Q+L R
Sbjct: 146 LLGSSEMMSSHQPSGSNASANTPTLDGLARDLTAIAKEGSLDPVIGRQKEIERVIQVLSR 205
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNP LIGEPGVGKTAIAEGLAQ+I + ++P+T+ K+V+TLDMG +VAGTKYRGEFE
Sbjct: 206 RTKNNPVLIGEPGVGKTAIAEGLAQKIVNNEIPETLRDKRVMTLDMGTVVAGTKYRGEFE 265
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
+RLKK+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKP+LARGELQC+GATTLD
Sbjct: 266 DRLKKIMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPALARGELQCVGATTLD 325
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRK+IEKD ALERRFQP++V EP+ ++ I+IL GLR+RYE HH+++ TDEA+ A ++S
Sbjct: 326 EYRKYIEKDAALERRFQPIQVDEPTPEDAIKILSGLRDRYEAHHRVKITDEAINQAVKMS 385
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
+YI+DRFLPDKAIDLIDEA S+VRL+ +P +ELE L ++ KEK+ AV+ Q+FE+
Sbjct: 386 DRYITDRFLPDKAIDLIDEAASKVRLQSFTVPPNLKELEARLEEVRKEKDAAVQSQEFEE 445
Query: 301 AGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVS 360
A LRD+E L+ ++ + KE G + VT+ DI H+V+ WTGIPV K+
Sbjct: 446 AAALRDKEQKLREELDSTKKDWKERQ------GKLNMEVTQEDIAHVVANWTGIPVLKLK 499
Query: 361 TDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 420
+E++RLLKME+ LH RVIGQDEAVK+++RA+RRAR GLK+P RPI SFIF GPTGVGK+
Sbjct: 500 EEETERLLKMEDILHDRVIGQDEAVKSVARAVRRARAGLKDPKRPIGSFIFLGPTGVGKT 559
Query: 421 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 480
ELA+A+A FG E+AMIR+DMSE+ME+HT ++L+G+PPGYVGY EGGQLTE VRR+PY+
Sbjct: 560 ELARAVAETLFGDEDAMIRVDMSEYMEKHTTARLVGAPPGYVGYDEGGQLTEKVRRKPYS 619
Query: 481 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI 540
V+L DEIEKAHPDVFN++LQ+L+DGRLTDSKGRTVDF+NT++IMTSNVG+S+I+K +
Sbjct: 620 VILLDEIEKAHPDVFNILLQVLDDGRLTDSKGRTVDFRNTVVIMTSNVGASMIKKNS-SL 678
Query: 541 GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 600
GF + EK Y +K V +ELK+ FRPEFLNR+DE+IVF L + +++I +M ++
Sbjct: 679 GFTTNDSEK--KYQDMKDKVMDELKRSFRPEFLNRIDEIIVFHSLEQEHIEKIVTLMTED 736
Query: 601 VFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEG 660
+ RL ++I+ +++E ++ + +EG++P+YGARPLRRAI R +ED ++E++L I +G
Sbjct: 737 LRKRLVEQEIDFKLSEEAKKILAKEGFDPAYGARPLRRAIQRNIEDRLSEELLKGTITKG 796
Query: 661 DSVIVDVDSDGNVTV 675
D+V +D + DG +TV
Sbjct: 797 DTVQIDAE-DGKLTV 810
>gi|366163201|ref|ZP_09462956.1| ATPase AAA-2 [Acetivibrio cellulolyticus CD2]
Length = 810
Score = 797 bits (2058), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/668 (59%), Positives = 525/668 (78%), Gaps = 9/668 (1%)
Query: 5 STEAVG-AGV-GGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRT 62
S EA G +GV ++ + PTL ++G +LT +A E K DPV+GR +IERV+QIL RRT
Sbjct: 143 SEEAPGTSGVPKNNATSSNTPTLNQFGRDLTDMAREAKFDPVIGRDKEIERVIQILSRRT 202
Query: 63 KNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEER 122
KNNPCLIGEPGVGKTAIAEGLAQ+I G++P+ ++ K+V+TLD+ +VAG KYRGEFEER
Sbjct: 203 KNNPCLIGEPGVGKTAIAEGLAQKIVEGNIPEMLKDKRVVTLDLSSMVAGAKYRGEFEER 262
Query: 123 LKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEY 182
LKK +EEIK++ +ILFIDE+HT+IGAGAAEGAIDA+NILKPSLARGE+Q IGATTLDEY
Sbjct: 263 LKKALEEIKKAGNVILFIDEMHTIIGAGAAEGAIDASNILKPSLARGEIQVIGATTLDEY 322
Query: 183 RKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQ 242
RKHIEKD ALERRFQP+ V EPS +E I+ILKG+R++YE HH+++ TDEALV+A +LS +
Sbjct: 323 RKHIEKDAALERRFQPITVGEPSKEEAIEILKGVRDKYEAHHRVKITDEALVAAVKLSDR 382
Query: 243 YISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAG 302
YI++RFLPDKAIDLIDEA SRVRL+ P + ++LE+++ ++ KEK +++ Q+FEKA
Sbjct: 383 YITERFLPDKAIDLIDEAASRVRLKSFTAPPDLKQLEEQVEKLRKEKEDSIICQEFEKAA 442
Query: 303 ELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTD 362
+RD E LK ++ DK K + + + VTE ++ IV+ WTGIPV++++ +
Sbjct: 443 RIRDEEQRLKNEL----DKAKNDWQQKNQTTTD--TVTEEEVAGIVADWTGIPVKRLAEE 496
Query: 363 ESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSEL 422
ES+RL+KMEETLH RVIGQ+EAVKAIS+AIRR RVGLK+P RP+ SFIF GPTGVGK+EL
Sbjct: 497 ESERLMKMEETLHNRVIGQEEAVKAISKAIRRGRVGLKDPKRPVGSFIFLGPTGVGKTEL 556
Query: 423 AKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVV 482
+KALA FG E ++ R+DMSE+ME+H+VS+L+GSPPGYVGY EGGQLTE VRR+PY+VV
Sbjct: 557 SKALAEALFGDENSITRIDMSEYMEKHSVSRLVGSPPGYVGYEEGGQLTEKVRRKPYSVV 616
Query: 483 LFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGF 542
LFDEIEKAHPDVFN++LQILEDGRLTDS+GR VDF+NT++IMTSNVG+ +I + +R+GF
Sbjct: 617 LFDEIEKAHPDVFNILLQILEDGRLTDSQGRVVDFRNTVIIMTSNVGARLITE-PKRLGF 675
Query: 543 DLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVF 602
EK +Y+ +K+ V ELK FRPEFLNR+DE+IVF L + +K I +M++ +
Sbjct: 676 SSANAEKAKTYSDMKNNVMGELKNTFRPEFLNRVDEIIVFHPLEEEHLKSIVGLMIESLA 735
Query: 603 DRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDS 662
RLK I L+VT+ + + ++G++ YGARPLRRAI ++ED +AE+ML ++ GD
Sbjct: 736 KRLKDNAIALEVTDDAKLLLAKKGFDQLYGARPLRRAIQSMVEDKLAEEMLEGRVRAGDK 795
Query: 663 VIVDVDSD 670
V+++ D
Sbjct: 796 VVIESKED 803
>gi|258422629|ref|ZP_05685535.1| endopeptidase [Staphylococcus aureus A9635]
gi|417890327|ref|ZP_12534404.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21200]
gi|418308157|ref|ZP_12919810.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21194]
gi|418559680|ref|ZP_13124215.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21252]
gi|418888425|ref|ZP_13442562.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG1524]
gi|418993239|ref|ZP_13540878.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG290]
gi|257847201|gb|EEV71209.1| endopeptidase [Staphylococcus aureus A9635]
gi|341855054|gb|EGS95908.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21200]
gi|365241637|gb|EHM82381.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21194]
gi|371974523|gb|EHO91853.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21252]
gi|377747202|gb|EHT71168.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG290]
gi|377754877|gb|EHT78782.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG1524]
Length = 818
Score = 797 bits (2058), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/653 (58%), Positives = 510/653 (78%), Gaps = 9/653 (1%)
Query: 16 GSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVG 75
S N PTL+ +LT +A++G LDPV+GR +I RV+++L RRTKNNP LIGEPGVG
Sbjct: 154 ASKSNNTPTLDSLARDLTVIAKDGTLDPVIGRDKEITRVIEVLSRRTKNNPVLIGEPGVG 213
Query: 76 KTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDE 135
KTAIAEGLAQ I + +VP+T++ K+V++LDMG +VAGTKYRGEFEERLKK+MEEI+Q+
Sbjct: 214 KTAIAEGLAQAIVNNEVPETLKDKRVMSLDMGTVVAGTKYRGEFEERLKKVMEEIQQAGN 273
Query: 136 IILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERR 195
+ILFIDE+HTL+GAG AEGAIDA+NILKP+LARGELQCIGATTLDEYRK+IEKD ALERR
Sbjct: 274 VILFIDELHTLVGAGGAEGAIDASNILKPALARGELQCIGATTLDEYRKNIEKDAALERR 333
Query: 196 FQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAID 255
FQPV+V EPSV +T+ ILKGLR+RYE HH++ +DEA+ +A +LS +Y+SDRFLPDKAID
Sbjct: 334 FQPVQVDEPSVVDTVAILKGLRDRYEAHHRINISDEAIEAAVKLSNRYVSDRFLPDKAID 393
Query: 256 LIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQI 315
LIDEA S+VRL+ P +E+E+E+ ++ EK+ AV Q+FE A LRD++ L+ Q
Sbjct: 394 LIDEASSKVRLKSHTTPNNLKEIEQEIEKVKNEKDAAVHAQEFENAANLRDKQTKLEKQY 453
Query: 316 SALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLH 375
++ K + + ++E DI +++ WTGIP+ K++ ES++LL +E+ LH
Sbjct: 454 EEAKNEWKNAQNGMSTS------LSEEDIAEVIAGWTGIPLTKINETESEKLLSLEDALH 507
Query: 376 KRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEE 435
+RVIGQ +AV +IS+A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+ALA FG ++
Sbjct: 508 ERVIGQKDAVNSISKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGDDD 567
Query: 436 AMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVF 495
AMIR+DMSEFME+H VS+L+G+PPGYVG+ +GGQLTE VRR+PY+V+LFDEIEKAHPDVF
Sbjct: 568 AMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKVRRKPYSVILFDEIEKAHPDVF 627
Query: 496 NMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNR 555
N++LQ+L+DG LTD+KGRTVDF+NT++IMTSNVG+ ++ R GF D +D Y
Sbjct: 628 NILLQVLDDGHLTDTKGRTVDFRNTIIIMTSNVGAQELQD-QRFAGFGGSSDGQD--YET 684
Query: 556 IKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVT 615
I+ + +ELK FRPEFLNR+D++IVF +LTK E+KEI +M+ ++ +RL ++I + VT
Sbjct: 685 IRKTMLKELKNSFRPEFLNRVDDIIVFHKLTKEELKEIVTMMVNKLTNRLSEQNINIIVT 744
Query: 616 ERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVD 668
++ ++++ EEGY+P YGARPL RAI + +ED+++E +L EG V VD D
Sbjct: 745 DKAKDKIAEEGYDPEYGARPLIRAIQKTIEDNLSELILDGNQIEGKKVTVDHD 797
>gi|290958398|ref|YP_003489580.1| Clp family ATP-binding protease [Streptomyces scabiei 87.22]
gi|260647924|emb|CBG71029.1| putative Clp-family ATP-binding protease [Streptomyces scabiei
87.22]
Length = 841
Score = 797 bits (2058), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/687 (58%), Positives = 532/687 (77%), Gaps = 16/687 (2%)
Query: 11 AGVGGGSSGNKMPTL--EEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCL 68
A GG + G +L +++G NLT+ A E KLDPV+GR+ +IERV+Q+L RRTKNNP L
Sbjct: 151 ATAGGPAEGTPSTSLVLDQFGRNLTQAARESKLDPVIGREKEIERVMQVLSRRTKNNPVL 210
Query: 69 IGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLME 128
IGEPGVGKTA+ EGLAQ I G+VP+T++ K + TLD+G LVAG++YRG+FEERLKK+++
Sbjct: 211 IGEPGVGKTAVVEGLAQAIVKGEVPETLKDKHLYTLDLGALVAGSRYRGDFEERLKKVLK 270
Query: 129 EIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEK 188
EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEYRKH+EK
Sbjct: 271 EIRTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIGATTLDEYRKHLEK 330
Query: 189 DPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRF 248
D ALERRFQP++V EPS+ TI+ILKGLR+RYE HH++ TDEALV AA L+ +YISDRF
Sbjct: 331 DAALERRFQPIQVAEPSLPHTIEILKGLRDRYEAHHRVSITDEALVQAATLADRYISDRF 390
Query: 249 LPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDRE 308
LPDKAIDLIDEAGSR+R+R P + RE ++++ + ++K A+ QDFEKA LRD+E
Sbjct: 391 LPDKAIDLIDEAGSRMRIRRMTAPPDLREFDEKIAGVRRDKESAIDSQDFEKAASLRDKE 450
Query: 309 MDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKVSTDESD 365
L A K + E +AGD+ VV EVD I +++ TGIPV K++ +ES
Sbjct: 451 KQLLA--------AKAKREKEWKAGDM-DVVAEVDGELIAEVLATATGIPVFKLTEEESS 501
Query: 366 RLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKA 425
RLL+ME+ LHKRVIGQ +AVKA+S+AIRR R GLK+P RP SFIF+GP+GVGK+EL+KA
Sbjct: 502 RLLRMEDELHKRVIGQVDAVKALSKAIRRTRAGLKDPKRPGGSFIFAGPSGVGKTELSKA 561
Query: 426 LAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFD 485
LA + FG E+A+I LDMSEF E+HTVS+L GSPPGYVGY EGGQLTE VRR+P++VVLFD
Sbjct: 562 LAEFLFGDEDALISLDMSEFSEKHTVSRLFGSPPGYVGYEEGGQLTEKVRRKPFSVVLFD 621
Query: 486 EIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLD 545
E+EKAHPD+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N+G+ I K G +GF
Sbjct: 622 EVEKAHPDIFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNLGTRDISK-GFNLGFAAS 680
Query: 546 YDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRL 605
D+K ++Y R+K+ V++ELKQ+FRPEFLNR+D+++VF QLT+ ++ +I D+M+ +V +RL
Sbjct: 681 GDKK-TNYERMKNKVSDELKQHFRPEFLNRVDDVVVFPQLTQEDILKIVDLMIGKVDERL 739
Query: 606 KTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIV 665
K +D+ +++++ +E + ++GY+P GARPLRR I R +ED+++EK+L E++ G V+V
Sbjct: 740 KDRDMGIELSQAAKELLSKKGYDPVLGARPLRRTIQREVEDTLSEKILFGELRPGHIVVV 799
Query: 666 DVDSDGNVTVLNGSSGAPESLADPLPV 692
D + +G+ +L D P+
Sbjct: 800 DTEGEGDAATFTFRGEEKSALPDVPPI 826
>gi|297618415|ref|YP_003703574.1| ATPase AAA [Syntrophothermus lipocalidus DSM 12680]
gi|297146252|gb|ADI03009.1| ATPase AAA-2 domain protein [Syntrophothermus lipocalidus DSM
12680]
Length = 830
Score = 796 bits (2057), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/651 (59%), Positives = 527/651 (80%), Gaps = 10/651 (1%)
Query: 21 KMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIA 80
K P L+ + +LT+LA E KLDPV+GR+ +I+RV Q+L RRTKNNP LIG+PGVGKTAI
Sbjct: 182 KTPVLDTFSRDLTQLAREHKLDPVIGREKEIDRVTQVLSRRTKNNPVLIGDPGVGKTAIV 241
Query: 81 EGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFI 140
EGLAQRI VP+ + K+V+ LD+ +VAGTKYRGEFE+RL K++ EI+ + +II+FI
Sbjct: 242 EGLAQRIVENKVPEVLSDKRVVVLDLSTMVAGTKYRGEFEDRLTKVVNEIRNAGDIIVFI 301
Query: 141 DEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVK 200
DE+HT++GAGAAEGAIDAANILKP+LARGE QCIGATT+DEYRKH+EKD ALERRFQP+
Sbjct: 302 DELHTIVGAGAAEGAIDAANILKPALARGEFQCIGATTIDEYRKHVEKDAALERRFQPIM 361
Query: 201 VPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEA 260
V EP+V+ETI+IL+GLR+RYE HH ++ TDEA+ +AA+LS +YI+DRFLPDKAIDLIDEA
Sbjct: 362 VDEPTVEETIEILRGLRDRYEAHHGVKITDEAIEAAARLSARYITDRFLPDKAIDLIDEA 421
Query: 261 GSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVD 320
S+VRLR+ LP+E +E+E L +I KEK EA+ Q++EKA LRD E +K +I
Sbjct: 422 ASKVRLRNYVLPDELKEMEARLEEIEKEKEEAIMAQEYEKAAGLRDEEQRVKEEIEK--Q 479
Query: 321 KGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIG 380
+ + MS+ + ++G VVT +I H+VS+WTGIPV +++ +ES+RL+K+EE LH+RVIG
Sbjct: 480 RKEWMSRRDRDSG----VVTPDEIAHVVSSWTGIPVVQMAEEESERLVKLEEILHQRVIG 535
Query: 381 QDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRL 440
QDEAVKA+++A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+ALA FGSEEA+IRL
Sbjct: 536 QDEAVKAVAQAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAEALFGSEEALIRL 595
Query: 441 DMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQ 500
DMSE+ME+H V+++IGSPPGYVGY EGGQLTE VRR+PY+V+L DEIEKAHPDV+N++LQ
Sbjct: 596 DMSEYMEKHAVARMIGSPPGYVGYDEGGQLTEKVRRKPYSVILLDEIEKAHPDVYNILLQ 655
Query: 501 ILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFD-LDYDEKDSSYNRIKSL 559
+LEDGRLTD KGRTVDF+NT++IMTSNVG+ I K R +GF D DE+D + ++K
Sbjct: 656 VLEDGRLTDGKGRTVDFRNTVVIMTSNVGADTIRK-ARNLGFGRQDADEQD--HEKMKEK 712
Query: 560 VTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFR 619
+ E+LK FRPEFLNR+DE+IVF L E+ +I +++++++ RL+ + LQVT+ +
Sbjct: 713 IMEKLKATFRPEFLNRIDEVIVFHSLNDTELGQIFELLIRDLRKRLEDQGFRLQVTDDAK 772
Query: 620 ERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSD 670
+ ++++G++P +GARPL+RAI + +E+ ++E++L R ++ GD++++DV++D
Sbjct: 773 KFIIKQGHDPVFGARPLKRAIQKNVENLLSEEILKRTVEPGDTILIDVEND 823
>gi|443635019|ref|ZP_21119190.1| class III stress response-related ATPase, AAA+ superfamily protein
[Bacillus subtilis subsp. inaquosorum KCTC 13429]
gi|443345210|gb|ELS59276.1| class III stress response-related ATPase, AAA+ superfamily protein
[Bacillus subtilis subsp. inaquosorum KCTC 13429]
Length = 810
Score = 796 bits (2057), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/667 (59%), Positives = 519/667 (77%), Gaps = 10/667 (1%)
Query: 9 VGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCL 68
G+ G +S PTL+ +LT +A+E LDPV+GR +I+RV+++L RRTKNNP L
Sbjct: 147 TGSSAAGTNSNANTPTLDSLARDLTAIAKEDSLDPVIGRSKEIQRVIEVLSRRTKNNPVL 206
Query: 69 IGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLME 128
IGEPGVGKTAIAEGLAQ+I + +VP+ + K+V+TLDMG +VAGTKYRGEFE+RLKK+M+
Sbjct: 207 IGEPGVGKTAIAEGLAQQIINNEVPEILRDKRVMTLDMGTVVAGTKYRGEFEDRLKKVMD 266
Query: 129 EIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEK 188
EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTLDEYRK+IEK
Sbjct: 267 EIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEYRKYIEK 326
Query: 189 DPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRF 248
D ALERRFQP++V +PS DE+IQILKGLR+RYE HH++ TD+A+ +A +LS +YISDRF
Sbjct: 327 DAALERRFQPIQVDQPSADESIQILKGLRDRYEAHHRVSITDDAIEAAVKLSDRYISDRF 386
Query: 249 LPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDRE 308
LPDKAIDLIDEAGS+VRLR P +ELE++L ++ KEK+ AV+ Q+FEKA LRD E
Sbjct: 387 LPDKAIDLIDEAGSKVRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFEKAASLRDTE 446
Query: 309 MDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLL 368
L+ Q+ KE + G VT DI +VS+WTG+PV K++ E+D+LL
Sbjct: 447 QRLREQVEDTKKSWKE------KQGQENSEVTVDDIAMVVSSWTGVPVSKIAQTETDKLL 500
Query: 369 KMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAA 428
ME LH RVIGQDEAV A+++A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+ALA
Sbjct: 501 NMESILHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAE 560
Query: 429 YYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIE 488
FG EEAMIR+DMSE+ME+H+ S+L+GSPPGYVGY EGGQLTE VRR+PY+VVL DEIE
Sbjct: 561 SIFGDEEAMIRIDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPYSVVLLDEIE 620
Query: 489 KAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDE 548
KAHPDVFN++LQ+LEDGRLTDSKGRTVDF+NT+LIMTSNVG+S +++ + +GF++ +
Sbjct: 621 KAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTILIMTSNVGASELKR-NKYVGFNV--QD 677
Query: 549 KDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTK 608
+ ++ +K V ELK+ FRPEF+NR+DE+IVF L K + EI +M ++ RLK +
Sbjct: 678 ETQNHKDMKDKVMGELKRAFRPEFINRIDEIIVFHSLEKKHLTEIVSLMSDQLTKRLKEQ 737
Query: 609 DIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVD 668
D+ +++TE + +V EEG + YGARPLRRAI + +ED ++E++L I +G +++DV+
Sbjct: 738 DLSIELTEAAKAKVAEEGVDLEYGARPLRRAIQKHVEDRLSEELLRGNIHKGQHIVLDVE 797
Query: 669 SDGNVTV 675
DG V
Sbjct: 798 -DGEFVV 803
>gi|170760517|ref|YP_001788851.1| negative regulator of genetic competence MecB/ClpC [Clostridium
botulinum A3 str. Loch Maree]
gi|169407506|gb|ACA55917.1| putative negative regulator of genetic competence MecB/ClpC
[Clostridium botulinum A3 str. Loch Maree]
Length = 811
Score = 796 bits (2057), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 388/649 (59%), Positives = 526/649 (81%), Gaps = 8/649 (1%)
Query: 23 PTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEG 82
PTL+++G +LT++AEEGK+DPV+GR + +RV++IL RRTKNNPCLIGEPGVGKTAIAEG
Sbjct: 163 PTLDQFGRDLTEMAEEGKVDPVIGRDKETQRVLEILCRRTKNNPCLIGEPGVGKTAIAEG 222
Query: 83 LAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDE 142
LAQ I +G++P+ ++ K+V+TLD+ ++AG KYRGEFE+RLKK+MEE++ S + ILFIDE
Sbjct: 223 LAQNIINGNIPEILKSKRVVTLDLTSMIAGAKYRGEFEDRLKKIMEEVRSSKDTILFIDE 282
Query: 143 VHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVP 202
+HT++GAGAAEGAIDAANILKP+LARGE+QCIGATTLDEYRK+IEKD ALERRFQP+ V
Sbjct: 283 IHTIVGAGAAEGAIDAANILKPALARGEIQCIGATTLDEYRKYIEKDSALERRFQPINVG 342
Query: 203 EPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGS 262
EP+ +ETI+ILKGLR++YE HH++++TD+A+ +A LS +YI DRFLPDKAIDL+DEAGS
Sbjct: 343 EPTKEETIEILKGLRDKYEAHHRVKFTDDAIYAAVNLSDRYIRDRFLPDKAIDLMDEAGS 402
Query: 263 RVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKG 322
+VR+++ P + + +E++L ++ KEK +A+R QDFEKA LRD+E +LK ++ L
Sbjct: 403 KVRIQNLIAPPDLKNIEEQLDKVVKEKEDAIRVQDFEKAANLRDKEKELKEKLEGLKKDW 462
Query: 323 KEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQD 382
AE E ++ +V+E I +VS WT IPV K++ ES+RLLK+E+ LH RVIGQ+
Sbjct: 463 ----NAEKEGSNL--IVSEQQIAAVVSNWTNIPVNKLTEKESERLLKLEDILHNRVIGQE 516
Query: 383 EAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDM 442
EA+K++SR++RRARVGLK+P RPI SFIF GPTGVGK+EL KALA FG+E MIR+DM
Sbjct: 517 EAIKSVSRSVRRARVGLKDPKRPIGSFIFLGPTGVGKTELTKALAEAMFGNENNMIRVDM 576
Query: 443 SEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQIL 502
SE+ME+H+VS+LIGSPPGYVG+ EGGQLT+ VR PY+VVLFDEIEKAHP+VFN++LQIL
Sbjct: 577 SEYMEKHSVSRLIGSPPGYVGHDEGGQLTDKVRTNPYSVVLFDEIEKAHPEVFNILLQIL 636
Query: 503 EDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDY-DEKDSSYNRIKSLVT 561
EDGRLTD KG+TVDF+NT++IMTSNVG+S I + + +GF+ +E+++ Y ++K +
Sbjct: 637 EDGRLTDGKGKTVDFRNTIIIMTSNVGASTISR-QKTLGFNTSIEEERETEYEKMKDNIM 695
Query: 562 EELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRER 621
ELK FRPEFLNR+D++IVF QL + ++EI +MLK V +R+K + I+L+ TE +
Sbjct: 696 NELKHSFRPEFLNRIDDIIVFHQLREEHIREIVKLMLKTVSNRVKDQGIKLEFTEEAEKI 755
Query: 622 VVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSD 670
+ +EGY+ +YGARPLRRAI +++ED ++E++L IK+GDSV V+ D
Sbjct: 756 LAKEGYDTNYGARPLRRAITKIVEDKLSEEILKGNIKKGDSVKVNTIED 804
>gi|224475673|ref|YP_002633279.1| ClpC ATPase family protein [Staphylococcus carnosus subsp. carnosus
TM300]
gi|222420280|emb|CAL27094.1| ClpC ATPase family protein [Staphylococcus carnosus subsp. carnosus
TM300]
Length = 821
Score = 796 bits (2057), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/651 (59%), Positives = 507/651 (77%), Gaps = 8/651 (1%)
Query: 16 GSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVG 75
+ N PTL+ +LT +A++G LDPVVGR +I RV+++L RRTKNNP LIGEPGVG
Sbjct: 154 ATKSNNTPTLDGLARDLTVIAKDGTLDPVVGRDTEITRVIEVLSRRTKNNPVLIGEPGVG 213
Query: 76 KTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDE 135
KTAIAEGLAQ I + +VP+T++ K+V++LDMG +VAGTKYRGEFEERLKK+MEEI Q +
Sbjct: 214 KTAIAEGLAQAIVNNEVPETLKDKRVMSLDMGTVVAGTKYRGEFEERLKKVMEEIHQVGD 273
Query: 136 IILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERR 195
+ILFIDE+HTLIGAG AEGAIDA+NILKP+LARGELQ IGATTLDEYRKHIEKD ALERR
Sbjct: 274 VILFIDELHTLIGAGGAEGAIDASNILKPALARGELQAIGATTLDEYRKHIEKDAALERR 333
Query: 196 FQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAID 255
FQPV+V EP+V++T+ ILKGLR+RYE HH++ +DEA+ +AA+LS +Y+SDRFLPDKAID
Sbjct: 334 FQPVQVDEPTVEDTVSILKGLRDRYEAHHRINISDEAIEAAARLSDRYVSDRFLPDKAID 393
Query: 256 LIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQI 315
LIDEA S+VRL+ P +E+E+E+ ++ EK+ AV Q+FE A LRD++ L+ Q
Sbjct: 394 LIDEASSKVRLKSHTTPTNLKEIEQEIEKVKNEKDAAVHSQEFENAANLRDKQTKLEKQY 453
Query: 316 SALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLH 375
D E A+ G ++E DI +++ WTGIP+ +++ ES+RLL +E+TLH
Sbjct: 454 E---DAKNEWKNAQ---GGSNTTLSENDIAEVIAGWTGIPLTRLNETESERLLNLEDTLH 507
Query: 376 KRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEE 435
+RVIGQ +AV +IS+A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+ALA FG E+
Sbjct: 508 ERVIGQKDAVTSISKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGDED 567
Query: 436 AMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVF 495
AMIR+DMSEFME+H VS+L+G+PPGYVG+ +GGQLTE VRR+PY+V+LFDEIEKAHPDVF
Sbjct: 568 AMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKVRRKPYSVILFDEIEKAHPDVF 627
Query: 496 NMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNR 555
N++LQ+L+DG LTD+KGR VDF+NT+++MTSNVG+ ++ R GF E Y
Sbjct: 628 NILLQVLDDGFLTDTKGRRVDFRNTVIVMTSNVGAQELQD-QRFTGFGGGSSE-GQDYET 685
Query: 556 IKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVT 615
I+S + +ELK FRPEFLNR+D++IVF +L K E+KEI M+ ++ DRL +DI + VT
Sbjct: 686 IRSTMLKELKNAFRPEFLNRVDDIIVFHKLNKDELKEIVTKMVNKLTDRLSEQDINISVT 745
Query: 616 ERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVD 666
E+ +E++ EEGY+P YGARPL RAI + +ED+++E +L EG V+VD
Sbjct: 746 EKAKEKIAEEGYDPQYGARPLIRAIQKTVEDNLSELILDGNQLEGKDVVVD 796
>gi|187776547|ref|ZP_02993020.1| hypothetical protein CLOSPO_00059 [Clostridium sporogenes ATCC
15579]
gi|187775206|gb|EDU39008.1| ATPase family associated with various cellular activities (AAA)
[Clostridium sporogenes ATCC 15579]
Length = 814
Score = 796 bits (2057), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/649 (59%), Positives = 525/649 (80%), Gaps = 8/649 (1%)
Query: 23 PTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEG 82
PTL+++G +LT++AEEGK+DPV+GR + +RV++IL RRTKNNPCLIGEPGVGKTAIAEG
Sbjct: 166 PTLDQFGRDLTEMAEEGKIDPVIGRDKETQRVLEILCRRTKNNPCLIGEPGVGKTAIAEG 225
Query: 83 LAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDE 142
LAQ I +G++P+ ++ K+V+TLD+ ++AG KYRGEFE+RLKK+MEE++ S + ILFIDE
Sbjct: 226 LAQNIINGNIPEILKNKRVVTLDLTSMIAGAKYRGEFEDRLKKIMEEVRNSKDTILFIDE 285
Query: 143 VHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVP 202
+HT++GAGAAEGAIDAANILKP+LARGE+QCIGATTLDEYRK+IEKD ALERRFQP+ V
Sbjct: 286 IHTIVGAGAAEGAIDAANILKPALARGEIQCIGATTLDEYRKYIEKDSALERRFQPINVG 345
Query: 203 EPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGS 262
EP+ +ETI+ILKGLR++YE HH++++TD+A+ +A LS +YI DRFLPDKAIDLIDEAGS
Sbjct: 346 EPTKEETIEILKGLRDKYEAHHRVKFTDDAIYAAVNLSDRYIRDRFLPDKAIDLIDEAGS 405
Query: 263 RVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKG 322
+VR+ + P + + +E++L ++ KEK +A+R QDFEKA LRD+E +LK ++ L
Sbjct: 406 KVRIENLIAPPDLKNIEEQLDKVVKEKEDAIRVQDFEKAANLRDKEKELKEKLEGLKKDW 465
Query: 323 KEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQD 382
AE E ++ +V+E I +VS WT IPV K++ ES+RLLK+E+ LH RVIGQ+
Sbjct: 466 ----NAEKEGSNL--IVSEQQIASVVSKWTNIPVNKLTEKESERLLKLEDILHNRVIGQE 519
Query: 383 EAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDM 442
EA+K++S+++RRARVGLK+P RPI SFIF GPTGVGK+EL KALA FG+E MIR+DM
Sbjct: 520 EAIKSVSKSVRRARVGLKDPKRPIGSFIFLGPTGVGKTELTKALAEAMFGNENNMIRVDM 579
Query: 443 SEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQIL 502
SE+ME+H+VS+LIGSPPGYVG+ EGGQLTE VR PY+VVLFDEIEKAHP+VFN++LQIL
Sbjct: 580 SEYMEKHSVSRLIGSPPGYVGHDEGGQLTEKVRTNPYSVVLFDEIEKAHPEVFNILLQIL 639
Query: 503 EDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDY-DEKDSSYNRIKSLVT 561
EDGRLTD KG+TVDF+NT++IMTSNVG+S I + + +GF+ +E+++ Y ++K +
Sbjct: 640 EDGRLTDGKGKTVDFRNTIIIMTSNVGASTISR-QKTLGFNTSIEEERETEYEKMKDNIM 698
Query: 562 EELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRER 621
ELK FRPEFLNR+D++IVF QL + +KEI +MLK V +R++ + I+L+ TE +
Sbjct: 699 HELKHSFRPEFLNRIDDIIVFHQLREEHIKEIVKLMLKIVSNRVEDQGIKLEFTEEAEKI 758
Query: 622 VVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSD 670
+ +EGY+ +YGARPLRRAI +++ED ++E++L IK+GDSV V+ D
Sbjct: 759 LAKEGYDTNYGARPLRRAITKIVEDKLSEEILKGNIKKGDSVKVNTIED 807
>gi|51894268|ref|YP_076959.1| class III stress response-related ATPase [Symbiobacterium
thermophilum IAM 14863]
gi|51857957|dbj|BAD42115.1| class III stress response-related ATPase [Symbiobacterium
thermophilum IAM 14863]
Length = 833
Score = 796 bits (2056), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/666 (61%), Positives = 522/666 (78%), Gaps = 17/666 (2%)
Query: 16 GSSGNKMP-----TLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIG 70
GS+ K P TL+++G +L ++A +GKLDPV+GR+ +IERV+QIL RRTKNNP LIG
Sbjct: 157 GSAKVKGPKTSTSTLDQFGRDLNQMARDGKLDPVIGREKEIERVIQILTRRTKNNPVLIG 216
Query: 71 EPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEI 130
EPGVGKTAIAEGLAQRI G VP+ ++ K+V+ LD+ LVAG+KYRGEFEERLKK++EEI
Sbjct: 217 EPGVGKTAIAEGLAQRIVDGRVPEILKDKRVVALDLASLVAGSKYRGEFEERLKKVLEEI 276
Query: 131 KQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDP 190
+ + +ILFIDE+HT+IGAGAAEGAIDA+NILKP+LARGELQ IGATT+DEYRK++EKD
Sbjct: 277 RNAGNVILFIDELHTIIGAGAAEGAIDASNILKPALARGELQAIGATTIDEYRKYVEKDA 336
Query: 191 ALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLP 250
ALERRFQPV V EPS ++ IQILKGLR+RYE HH++ TD A+ +A +LS +Y++DRFLP
Sbjct: 337 ALERRFQPVMVEEPSPEDAIQILKGLRDRYEAHHRVEITDAAIEAAVRLSDRYVTDRFLP 396
Query: 251 DKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMD 310
DKA+DLIDEA SRVRL P +ELE +L ++ KEK AV+GQ+FEKA LRD+E
Sbjct: 397 DKAVDLIDEAASRVRLSTFVAPPNLKELEDKLEEVRKEKEAAVQGQEFEKAARLRDKETK 456
Query: 311 LKAQISALVDKGKEMSKAETEAGDVGP--VVTEVDIQHIVSAWTGIPVEKVSTDESDRLL 368
LK ++ E K E + V VV E DI IVS WTGIP K++ DES RLL
Sbjct: 457 LKEEL--------ERQKNEWQQKKVTAKCVVNEEDIATIVSQWTGIPATKLTMDESQRLL 508
Query: 369 KMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAA 428
+E+ LH++V+GQDEAV A++RAIRRAR GLK+P RPI SFIF GPTG GK+ LAKALA
Sbjct: 509 NLEKVLHEKVVGQDEAVAAVARAIRRARAGLKDPKRPIGSFIFLGPTGTGKTHLAKALAE 568
Query: 429 YYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIE 488
FG E+AM+R+DMSE+MERHT S+L+G+PPGYVGY EGGQLTEAVRRRPY VVL DEIE
Sbjct: 569 ALFGDEDAMVRIDMSEYMERHTTSRLVGAPPGYVGYEEGGQLTEAVRRRPYCVVLLDEIE 628
Query: 489 KAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDE 548
KAHP+VFN++LQ+LEDGRLT++KGRTVDF+NT++IMTSN G+ I+ G +++GF + DE
Sbjct: 629 KAHPEVFNILLQVLEDGRLTEAKGRTVDFRNTVIIMTSNAGAQAIQ-GDKKLGFTVQEDE 687
Query: 549 KDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTK 608
K+ Y R+KS V +E+K+ FRPEFLNRLDE+I+F LTK +KEI + +K+V DRLK +
Sbjct: 688 KE-RYERMKSRVMDEVKRLFRPEFLNRLDEIIIFHSLTKDHLKEIVRLEVKKVADRLKEQ 746
Query: 609 DIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVD 668
+EL +++ E++V EGY+ +GARPLRRAI RL+ED ++E+ML + K G+ V VD D
Sbjct: 747 GVELTLSDSALEKLVAEGYDEKFGARPLRRAIQRLVEDPLSEEMLRQPFKYGEQVYVDTD 806
Query: 669 SDGNVT 674
++G +
Sbjct: 807 AEGKIV 812
>gi|308171976|ref|YP_003918681.1| class III stress response-like ATPase, AAA+ superfamily [Bacillus
amyloliquefaciens DSM 7]
gi|384157699|ref|YP_005539772.1| class III stress response-related ATPase, AAA+ superfamily protein
[Bacillus amyloliquefaciens TA208]
gi|384162492|ref|YP_005543871.1| class III stress response ATPase [Bacillus amyloliquefaciens LL3]
gi|384166714|ref|YP_005548092.1| class III stress response-related ATPase [Bacillus
amyloliquefaciens XH7]
gi|307604840|emb|CBI41211.1| class III stress response-related ATPase, AAA+ superfamily
[Bacillus amyloliquefaciens DSM 7]
gi|328551787|gb|AEB22279.1| class III stress response-related ATPase, AAA+ superfamily protein
[Bacillus amyloliquefaciens TA208]
gi|328910047|gb|AEB61643.1| class III stress response ATPase [Bacillus amyloliquefaciens LL3]
gi|341825993|gb|AEK87244.1| class III stress response-related ATPase, AAA+ superfamily
[Bacillus amyloliquefaciens XH7]
Length = 811
Score = 796 bits (2056), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/673 (60%), Positives = 522/673 (77%), Gaps = 15/673 (2%)
Query: 5 STEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKN 64
S E +G G SS N PTL+ +LT +A E LDPV+GR +I+RV+++L RRTKN
Sbjct: 145 SNETGTSGAGTNSSAN-TPTLDSLARDLTAIAREDSLDPVIGRSKEIQRVIEVLSRRTKN 203
Query: 65 NPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLK 124
NP LIGEPGVGKTAIAEGLAQ+I + +VP+ + K+V+TLDMG +VAGTKYRGEFE+RLK
Sbjct: 204 NPVLIGEPGVGKTAIAEGLAQQIINNEVPEILRDKRVMTLDMGTVVAGTKYRGEFEDRLK 263
Query: 125 KLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRK 184
K+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTLDEYRK
Sbjct: 264 KVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEYRK 323
Query: 185 HIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYI 244
+IEKD ALERRFQP++V EPSVDE+IQILKGLR+RYE HH++ TDEA+ +A +LS +YI
Sbjct: 324 YIEKDAALERRFQPIQVDEPSVDESIQILKGLRDRYEAHHRVSITDEAIEAAVKLSDRYI 383
Query: 245 SDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGEL 304
SDRFLPDKAIDLIDEAGS+VRLR P +ELE++L ++ KEK+ AV+ Q+FEKA L
Sbjct: 384 SDRFLPDKAIDLIDEAGSKVRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFEKAASL 443
Query: 305 RDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDES 364
RD E L+ Q+ KE + G V+ DI +VS+WTG+PV K++ E+
Sbjct: 444 RDTEQRLREQVEDTKKTWKE------KQGQENSEVSVEDIAMVVSSWTGVPVSKIAQTET 497
Query: 365 DRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAK 424
D+LL ME LH RVIGQDEAV A+++A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+
Sbjct: 498 DKLLNMESILHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELAR 557
Query: 425 ALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLF 484
ALA FG EEAMIR+DMSE+ME+H+ S+L+GSPPGYVGY EGGQLTE VRR+PY+VVL
Sbjct: 558 ALAESIFGDEEAMIRVDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPYSVVLL 617
Query: 485 DEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDL 544
DEIEKAHPDVFN++LQ+LEDGRLTDSKGRTVDF+NT+LIMTSNVG+S +++ + +GF++
Sbjct: 618 DEIEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTILIMTSNVGASELKR-NKYVGFNV 676
Query: 545 DYDEKDSSYNR--IKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVF 602
+D S N +K V ELK+ FRPEF+NR+DE+IVF L K + +I +M ++
Sbjct: 677 ----QDESQNHKDMKDKVMGELKRAFRPEFINRIDEIIVFHSLEKKHLTDIVSLMSDQLT 732
Query: 603 DRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDS 662
RLK +D+ +++TE + +V +EG + YGARPLRRAI + +ED ++E++L I +G
Sbjct: 733 KRLKEQDLSIELTEAAKAKVADEGVDLEYGARPLRRAIQKHVEDRLSEELLRGNIDKGQH 792
Query: 663 VIVDVDSDGNVTV 675
+++DV+ DG V
Sbjct: 793 IVLDVE-DGEFVV 804
>gi|269101123|ref|YP_003289271.1| ATP-dependent Clp protease ATP-binding subunit clpA homolog
[Ectocarpus siliculosus]
gi|266631631|emb|CAV31302.1| ATP-dependent Clp protease ATP-binding subunit clpA homolog
[Ectocarpus siliculosus]
gi|270118761|emb|CAT18853.1| ATP-dependent Clp protease ATP-binding subunit clpA homolog
[Ectocarpus siliculosus]
Length = 903
Score = 796 bits (2056), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/656 (61%), Positives = 518/656 (78%), Gaps = 14/656 (2%)
Query: 23 PTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEG 82
P L EY T+LT+ AE K+DPVVGR+ +IERV+QI+ RR KNNP LIGEPGVGKTA+AEG
Sbjct: 187 PNLMEYTTDLTESAERAKIDPVVGRENEIERVIQIISRRRKNNPILIGEPGVGKTAVAEG 246
Query: 83 LAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDE 142
LAQRI +VP + K+ LD+ LL+AGTKYRGEFEERLK++++E+K+ II+ IDE
Sbjct: 247 LAQRIVQREVPSELHDYKIFVLDITLLLAGTKYRGEFEERLKRIVQELKEQKNIIIVIDE 306
Query: 143 VHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVP 202
VHTL+GAGAAEGA+DAANILKP+LARGELQCIGATT+DEYR+HIEKDPALERRFQPV V
Sbjct: 307 VHTLVGAGAAEGALDAANILKPALARGELQCIGATTIDEYRQHIEKDPALERRFQPVWVN 366
Query: 203 EPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGS 262
EPS++ETI ILKGLR RYE HH+L T+EALV+AA L QYI+DRFLPDKAIDLIDE +
Sbjct: 367 EPSIEETIAILKGLRLRYEQHHRLEITNEALVAAANLGAQYIADRFLPDKAIDLIDEGSA 426
Query: 263 RVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKG 322
RVRL + +LP + L+KELR+I ++K+ AVR Q FE A E+RD E+ L++Q+ A++
Sbjct: 427 RVRLVNYRLPPAVQILDKELRRILEDKDLAVREQRFETATEIRDDELSLRSQMGAIIKAS 486
Query: 323 KE-MSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQ 381
+ K E VG DI IV+ WTG+PV K++ DE+ RLL++E LH+RVIGQ
Sbjct: 487 NTPIPKGVLERLKVG----SQDIASIVALWTGVPVTKITKDENTRLLELENVLHQRVIGQ 542
Query: 382 DEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLD 441
EAV A++RA+RRARVG++N RPIASF FSGPTGVGK+EL K LA+++FG+E+AM+RLD
Sbjct: 543 KEAVSAVARAVRRARVGMRNMKRPIASFFFSGPTGVGKTELTKTLASFFFGAEDAMVRLD 602
Query: 442 MSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQI 501
MSEFMERHTV+KLIGSPPGY+GY EGGQLTEAVRR+PYTV+LFDE+EKAHPDVFN++LQI
Sbjct: 603 MSEFMERHTVAKLIGSPPGYIGYNEGGQLTEAVRRKPYTVILFDEVEKAHPDVFNLLLQI 662
Query: 502 LEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKG---GRRIGFDLD-YDEKDSSYNRIK 557
LEDGRLTDSKGR +DFKNT+LIMTSN+GS I+ + +GF + D + + Y ++
Sbjct: 663 LEDGRLTDSKGRIIDFKNTILIMTSNLGSKAIQDNDLSSQGMGFGGEKADTQKTKYAQLC 722
Query: 558 SLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKT-KDIELQVTE 616
+ V E LK +F+PEFLNR+DE+IVF QLTK + EIA IM+ ++ +R+K KDI L +T
Sbjct: 723 NTVGESLKAFFKPEFLNRIDEIIVFEQLTKTNITEIAVIMVNDLIERVKKEKDITLSLTP 782
Query: 617 RFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGD----SVIVDVD 668
R E +VEEG+NP+YGARPLRRA+++L+ED ++ + L + + D ++VDVD
Sbjct: 783 RMMELLVEEGFNPTYGARPLRRALVKLVEDKVSLEYLRYKNENDDEDPVDILVDVD 838
>gi|319891481|ref|YP_004148356.1| ATP-dependent Clp protease, ATP-binding subunit ClpC / Negative
regulator of genetic competence clcC/mecB
[Staphylococcus pseudintermedius HKU10-03]
gi|386320177|ref|YP_006016340.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
pseudintermedius ED99]
gi|317161177|gb|ADV04720.1| ATP-dependent Clp protease, ATP-binding subunit ClpC / Negative
regulator of genetic competence clcC/mecB
[Staphylococcus pseudintermedius HKU10-03]
gi|323465348|gb|ADX77501.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
pseudintermedius ED99]
Length = 819
Score = 796 bits (2055), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/656 (59%), Positives = 510/656 (77%), Gaps = 13/656 (1%)
Query: 17 SSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGK 76
+ N PTL+ +LT +A +G LDPVVGR +I RV+++L RRTKNNP LIGEPGVGK
Sbjct: 155 AKSNNTPTLDGLARDLTVIARDGTLDPVVGRNSEITRVIEVLSRRTKNNPVLIGEPGVGK 214
Query: 77 TAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEI 136
TAIAEGLAQ I + +VP+T++GK+V++LDMG +VAGTKYRGEFEERLKK+MEEI + +
Sbjct: 215 TAIAEGLAQAIVNNEVPETLKGKRVMSLDMGTVVAGTKYRGEFEERLKKVMEEIHHAGNV 274
Query: 137 ILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRF 196
ILFIDE+HTLIGAG AEGAIDA+NILKP+LARGELQCIGATTLDEYRKHIEKD ALERRF
Sbjct: 275 ILFIDEMHTLIGAGGAEGAIDASNILKPALARGELQCIGATTLDEYRKHIEKDAALERRF 334
Query: 197 QPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDL 256
QPV+V EPSV +TI ILKGLR+RYE HH++ +DEA+ +AA+LS +Y+ DRFLPDKAIDL
Sbjct: 335 QPVQVNEPSVADTIAILKGLRDRYEAHHRINISDEAVEAAAKLSDRYVQDRFLPDKAIDL 394
Query: 257 IDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQIS 316
IDEA S+VRL+ P +E+E+++ Q+ KEK+ AV Q+FE A LRD++ L+ Q
Sbjct: 395 IDEASSKVRLKSHTTPTNLKEIEQQIEQVKKEKDAAVHAQEFENAANLRDKQTKLEKQY- 453
Query: 317 ALVDKGKEMSKAETEAGDVGPVVTEV--DIQHIVSAWTGIPVEKVSTDESDRLLKMEETL 374
E +K E + G T V DI +++ WTGIP+ +++ ES+RLL +E+TL
Sbjct: 454 -------EEAKNEWQNHQGGQHTTLVAEDIAEVIAGWTGIPLTRLNETESERLLNLEDTL 506
Query: 375 HKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSE 434
H+RVIGQ++AV AIS+A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+ALA FG E
Sbjct: 507 HERVIGQNDAVIAISKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAEAMFGEE 566
Query: 435 EAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDV 494
+AMIR+DMSEFME+H VS+L+G+PPGYVG+ +GGQLTE VRR+PY+V+LFDEIEKAHPDV
Sbjct: 567 DAMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKVRRKPYSVILFDEIEKAHPDV 626
Query: 495 FNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYN 554
FN++LQ+L+DG LTD+KGR VDF+NT++IMTSNVG+ ++ R GF + +D Y
Sbjct: 627 FNILLQVLDDGHLTDTKGRRVDFRNTVIIMTSNVGAQELQD-QRFAGFGGSSEGQD--YE 683
Query: 555 RIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQV 614
I+ + +ELK FRPEFLNR+D+ IVF +L K E+KEI +M+ ++ RL ++I ++V
Sbjct: 684 TIRKTMMKELKSAFRPEFLNRVDDTIVFHKLNKDELKEIVTMMVGKLTSRLSEQNINVRV 743
Query: 615 TERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSD 670
TE ++++ EEGY+P YGARPL RAI + +ED+++E +L + EG +V VD D +
Sbjct: 744 TEAAKDKIAEEGYDPEYGARPLIRAIQKTVEDNLSELILEGKELEGKNVTVDYDGE 799
>gi|262049567|ref|ZP_06022436.1| endopeptidase [Staphylococcus aureus D30]
gi|259162307|gb|EEW46880.1| endopeptidase [Staphylococcus aureus D30]
Length = 818
Score = 796 bits (2055), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/653 (58%), Positives = 510/653 (78%), Gaps = 9/653 (1%)
Query: 16 GSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVG 75
S N PTL+ +LT +A++G LD V+GR +I RV+++L RRTKNNP LIGEPGVG
Sbjct: 154 ASKSNNTPTLDSLARDLTVIAKDGTLDSVIGRDKEITRVIEVLSRRTKNNPVLIGEPGVG 213
Query: 76 KTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDE 135
KTAIAEGLAQ I + +VP+T++ K+V++LDMG +VAGTKYRGEFEERLKK+MEEI+Q+
Sbjct: 214 KTAIAEGLAQAIVNNEVPETLKDKRVMSLDMGTVVAGTKYRGEFEERLKKVMEEIQQAGN 273
Query: 136 IILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERR 195
+ILFIDE+HTL+GAG AEGAIDA+NILKP+LARGELQCIGATTLDEYRK+IEKD ALERR
Sbjct: 274 VILFIDELHTLVGAGGAEGAIDASNILKPALARGELQCIGATTLDEYRKNIEKDAALERR 333
Query: 196 FQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAID 255
FQPV+V EPSV +T+ ILKGLR+RYE HH++ +DEA+ +A +LS +Y+SDRFLPDKAID
Sbjct: 334 FQPVQVDEPSVVDTVAILKGLRDRYEAHHRINISDEAIEAAVKLSNRYVSDRFLPDKAID 393
Query: 256 LIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQI 315
LIDEA S+VRL+ P +E+E+E+ ++ EK+ AV Q+FE A LRD++ L+ Q
Sbjct: 394 LIDEASSKVRLKSHTTPNNLKEIEQEIEKVKNEKDAAVHAQEFENAANLRDKQTKLEKQY 453
Query: 316 SALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLH 375
++ K + + ++E DI +++ WTGIP+ K++ ES++LL +E+TLH
Sbjct: 454 EEAKNEWKNAQNGMSTS------LSEEDIAEVIAGWTGIPLTKINETESEKLLSLEDTLH 507
Query: 376 KRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEE 435
+RVIGQ +AV +IS+A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+ALA FG ++
Sbjct: 508 ERVIGQKDAVNSISKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGDDD 567
Query: 436 AMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVF 495
AMIR+DMSEFME+H VS+L+G+PPGYVG+ +GGQLTE VRR+PY+V+LFDEIEKAHPDVF
Sbjct: 568 AMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKVRRKPYSVILFDEIEKAHPDVF 627
Query: 496 NMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNR 555
N++LQ+L+DG LTD+KGRTVDF+NT++IMTSNVG+ ++ R GF D +D Y
Sbjct: 628 NILLQVLDDGHLTDTKGRTVDFRNTIIIMTSNVGAQELQD-QRFAGFGGSSDGQD--YET 684
Query: 556 IKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVT 615
I+ + +ELK FRPEFLNR+D++IVF +LTK E+KEI +M+ ++ +RL ++I + VT
Sbjct: 685 IRKTMLKELKNSFRPEFLNRVDDIIVFHKLTKEELKEIVTMMVNKLTNRLSEQNINIIVT 744
Query: 616 ERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVD 668
++ ++++ EEGY+P YGARPL RAI + +ED+++E +L EG V VD D
Sbjct: 745 DKAKDKIAEEGYDPEYGARPLIRAIQKTIEDNLSELILDGNQIEGKKVTVDHD 797
>gi|291452160|ref|ZP_06591550.1| ATP-dependent Clp protease [Streptomyces albus J1074]
gi|359151484|ref|ZP_09184191.1| ATP-dependent Clp protease [Streptomyces sp. S4]
gi|421738771|ref|ZP_16177114.1| ATPase with chaperone activity, ATP-binding subunit [Streptomyces
sp. SM8]
gi|291355109|gb|EFE82011.1| ATP-dependent Clp protease [Streptomyces albus J1074]
gi|406692815|gb|EKC96493.1| ATPase with chaperone activity, ATP-binding subunit [Streptomyces
sp. SM8]
Length = 840
Score = 796 bits (2055), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/697 (57%), Positives = 532/697 (76%), Gaps = 16/697 (2%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTL--EEYGTNLTKLAEEGKLDPVVGRQPQIERVVQIL 58
+ G S A GG + G +L +++G NLT+ A E KLDPV+GR+ +IERV+Q+L
Sbjct: 142 LSGYSGGKEAATAGGPAEGTPSTSLVLDQFGRNLTQAARESKLDPVIGREKEIERVMQVL 201
Query: 59 GRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGE 118
RRTKNNP LIGEPGVGKTA+ EGLAQ I G+VP+T++ K + TLD+G LVAG++YRG+
Sbjct: 202 SRRTKNNPVLIGEPGVGKTAVVEGLAQAIVKGEVPETLKDKHLYTLDLGALVAGSRYRGD 261
Query: 119 FEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATT 178
FEERLKK+++EI+ +I+LFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATT
Sbjct: 262 FEERLKKVLKEIRTRGDIVLFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIGATT 321
Query: 179 LDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQ 238
LDEYRKH+EKD ALERRFQP++V EPS+ TI+ILKGLR+RYE HH++ TD ALV+AA
Sbjct: 322 LDEYRKHLEKDAALERRFQPIQVAEPSLPHTIEILKGLRDRYEAHHRVSITDSALVAAAT 381
Query: 239 LSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDF 298
L+ +YISDRFLPDKAIDLIDEAGSR+R+R P + RE ++++ + ++K A+ QDF
Sbjct: 382 LADRYISDRFLPDKAIDLIDEAGSRMRIRRMTAPPDLREFDEKIAGVRRDKESAIDSQDF 441
Query: 299 EKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIP 355
EKA LRD+E L A K + E +AGD+ VV EVD I +++ TGIP
Sbjct: 442 EKAASLRDKEKQLLA--------AKAKREKEWKAGDM-DVVAEVDEDLIAEVLATATGIP 492
Query: 356 VEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPT 415
V K++ +ES RLL+ME+ LHKRVIGQ +AVKA+SRAIRR R GLK+P RP SFIF+GP+
Sbjct: 493 VFKLTEEESSRLLRMEDELHKRVIGQKDAVKALSRAIRRTRAGLKDPKRPGGSFIFAGPS 552
Query: 416 GVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVR 475
GVGK+EL+KALA + FG EEA+I LDMSEF E+HTVS+L GSPPGYVGY EGGQLTE VR
Sbjct: 553 GVGKTELSKALAEFLFGDEEALISLDMSEFSEKHTVSRLFGSPPGYVGYEEGGQLTEKVR 612
Query: 476 RRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEK 535
R+P++VVLFDE+EKAHPD+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N+G+ I K
Sbjct: 613 RKPFSVVLFDEVEKAHPDIFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNLGTRDISK 672
Query: 536 GGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIAD 595
G +GF D K S+Y R+K+ V++ELKQ+FRPEFLNR+D++IVF QL++ ++ +I D
Sbjct: 673 -GFNLGFAAQGDTK-SNYERMKAKVSDELKQHFRPEFLNRVDDVIVFPQLSQDDILQIVD 730
Query: 596 IMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAR 655
+M+ V +RLK +D+ L++++ +E + ++GY+P GARPLRR I R +ED+++EK+L
Sbjct: 731 LMVSRVDERLKDRDMGLELSQEAKELLAKKGYDPVLGARPLRRTIQREIEDTLSEKILFG 790
Query: 656 EIKEGDSVIVDVDSDGNVTVLNGSSGAPESLADPLPV 692
+++ G V+V + +G+ +L D PV
Sbjct: 791 DLRPGHIVVVGTEGEGDGKTFTFRGEEKSALPDAPPV 827
>gi|392407856|ref|YP_006444464.1| chaperone ATPase [Anaerobaculum mobile DSM 13181]
gi|390620992|gb|AFM22139.1| ATPase with chaperone activity, ATP-binding subunit [Anaerobaculum
mobile DSM 13181]
Length = 829
Score = 796 bits (2055), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/660 (59%), Positives = 516/660 (78%), Gaps = 10/660 (1%)
Query: 12 GVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGE 71
G+ S K PTL++ G +L ++A G+LDPV+GR+ +I+RV+QIL RRTKNNPCLIG+
Sbjct: 156 GLSKKKSHTKTPTLDQLGIDLVEMARRGELDPVIGREKEIQRVIQILSRRTKNNPCLIGD 215
Query: 72 PGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIK 131
PGVGKTAI EGLAQ+IA G+VP+ ++ K+++ L++G LVAGTKYRGEFEER++KL++E++
Sbjct: 216 PGVGKTAIVEGLAQKIALGEVPELLKNKRIVQLNIGNLVAGTKYRGEFEERMRKLIKEVR 275
Query: 132 QSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPA 191
S ++I+FIDE+HTL+GAG AEGA+DAANILKPSLA+GE Q IGATTLDEYRK+IEKD A
Sbjct: 276 DSRDVIVFIDEIHTLVGAGGAEGAVDAANILKPSLAKGEFQVIGATTLDEYRKYIEKDAA 335
Query: 192 LERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPD 251
LERRFQPV V EP++++TI+ILKGLR++YE HH+++YTD AL +AA+LS +YISDRFLPD
Sbjct: 336 LERRFQPVFVGEPTIEDTIEILKGLRDKYEAHHRVKYTDAALEAAAKLSARYISDRFLPD 395
Query: 252 KAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDL 311
KAIDLIDEAG+RVRL P+ +ELEK+L + KEK AV Q+FEKA LRD+E L
Sbjct: 396 KAIDLIDEAGARVRLSAMNPPDFIKELEKKLETVRKEKEAAVASQEFEKAAALRDQERKL 455
Query: 312 KAQISALVDKGKEMSKA-ETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKM 370
++ +E KA + + P+V E DI IVS WTGIPV +++ +ES RLL+M
Sbjct: 456 SEEL-------EEKRKAWQAKNSQEEPIVDEEDIALIVSEWTGIPVMQLTEEESQRLLRM 508
Query: 371 EETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYY 430
EE +HKR+I Q+EAV ++RAIRRAR GLK+P RPI SF+F GPTGVGK+EL+KALA +
Sbjct: 509 EEEIHKRIIDQEEAVSVVARAIRRARSGLKDPKRPIGSFLFLGPTGVGKTELSKALAEFL 568
Query: 431 FGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKA 490
FG E +MIRLDMSEFMERH VSKLIG+PPGYVGY EGG+LTEAVRRRPY VVLFDEIEKA
Sbjct: 569 FGDENSMIRLDMSEFMERHEVSKLIGAPPGYVGYEEGGKLTEAVRRRPYAVVLFDEIEKA 628
Query: 491 HPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKD 550
HPDVFN++LQILEDGRLTD +GR VDFKNT++IMTSN+G+ + KG IGF + E
Sbjct: 629 HPDVFNILLQILEDGRLTDGQGRVVDFKNTVIIMTSNLGAQDLMKGP-SIGFSV-TSESG 686
Query: 551 SSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDI 610
+ K + E +++ FRPEF+NR+DE++VF+ L + E+ +I D+M+K+V RL K +
Sbjct: 687 LDFEDAKKNILEAVRRTFRPEFINRIDEIVVFKPLAEKELLQIVDLMIKDVAKRLAEKGL 746
Query: 611 ELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSD 670
++VT+ + ++++GY P +GARPLRR I R +ED +A+ +L +IK G+ + VDV D
Sbjct: 747 IIEVTDAAKNFLLKKGYEPKFGARPLRRTIQRYIEDKLADILLEGKIKPGEVIKVDVADD 806
>gi|456391789|gb|EMF57147.1| Clp family ATP-binding protease [Streptomyces bottropensis ATCC
25435]
Length = 841
Score = 796 bits (2055), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/687 (58%), Positives = 530/687 (77%), Gaps = 16/687 (2%)
Query: 11 AGVGGGSSGNKMPTL--EEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCL 68
A GG + G +L +++G NLT+ A E KLDPV+GR+ +IERV+Q+L RRTKNNP L
Sbjct: 151 ATAGGPAEGTPSTSLVLDQFGRNLTQAARESKLDPVIGREKEIERVMQVLSRRTKNNPVL 210
Query: 69 IGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLME 128
IGEPGVGKTA+ EGLAQ I G+VP+T++ K + TLD+G LVAG++YRG+FEERLKK+++
Sbjct: 211 IGEPGVGKTAVVEGLAQAIVKGEVPETLKDKHLYTLDLGALVAGSRYRGDFEERLKKVLK 270
Query: 129 EIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEK 188
EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEYRKH+EK
Sbjct: 271 EIRTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIGATTLDEYRKHLEK 330
Query: 189 DPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRF 248
D ALERRFQP++V EPS+ TI+ILKGLR+RYE HH++ TDEALV AA L+ +YISDRF
Sbjct: 331 DAALERRFQPIQVAEPSLPHTIEILKGLRDRYEAHHRVSITDEALVQAATLADRYISDRF 390
Query: 249 LPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDRE 308
LPDKAIDLIDEAGSR+R+R P + RE ++++ + ++K A+ QDFEKA LRD+E
Sbjct: 391 LPDKAIDLIDEAGSRMRIRRMTAPPDLREFDEKIAGVRRDKESAIDSQDFEKAASLRDKE 450
Query: 309 MDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKVSTDESD 365
L A K + E +AGD+ VV EVD I +++ TGIPV K++ +ES
Sbjct: 451 KQLLA--------AKAKREKEWKAGDM-DVVAEVDGELIAEVLATATGIPVFKLTEEESS 501
Query: 366 RLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKA 425
RLL+ME+ LHKRVIGQ +AVKA+S+AIRR R GLK+P RP SFIF+GP+GVGK+EL+KA
Sbjct: 502 RLLRMEDELHKRVIGQVDAVKALSKAIRRTRAGLKDPKRPGGSFIFAGPSGVGKTELSKA 561
Query: 426 LAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFD 485
LA + FG E+A+I LDMSEF E+HTVS+L GSPPGYVGY EGGQLTE VRR+P++VVLFD
Sbjct: 562 LAEFLFGDEDALISLDMSEFSEKHTVSRLFGSPPGYVGYEEGGQLTEKVRRKPFSVVLFD 621
Query: 486 EIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLD 545
E+EKAHPD+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N+G+ I K G +GF
Sbjct: 622 EVEKAHPDIFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNLGTRDISK-GFNLGFAAS 680
Query: 546 YDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRL 605
D+K ++Y R+K+ V++ELKQ+FRPEFLNR+D+++VF QLT+ ++ +I D+M+ +V +RL
Sbjct: 681 GDKK-TNYERMKNKVSDELKQHFRPEFLNRVDDVVVFPQLTQEDILKIVDLMIGKVDERL 739
Query: 606 KTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIV 665
K +D+ +++++ +E + +GY+P GARPLRR I R +ED+++EK+L E++ G V+V
Sbjct: 740 KDRDMGIELSQAAKELLSRKGYDPVLGARPLRRTIQREVEDTLSEKILFGELRPGHIVVV 799
Query: 666 DVDSDGNVTVLNGSSGAPESLADPLPV 692
D + +G +L D P+
Sbjct: 800 DTEGEGETATFTFRGEEKAALPDVPPI 826
>gi|257432644|ref|ZP_05609004.1| endopeptidase [Staphylococcus aureus subsp. aureus E1410]
gi|257282059|gb|EEV12194.1| endopeptidase [Staphylococcus aureus subsp. aureus E1410]
Length = 818
Score = 795 bits (2054), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/653 (58%), Positives = 510/653 (78%), Gaps = 9/653 (1%)
Query: 16 GSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVG 75
S N PTL+ +LT +A++G LDPV+GR +I RV+++L RRTKNNP LIGEPGVG
Sbjct: 154 ASKSNNTPTLDSLARDLTVIAKDGTLDPVIGRDKEITRVIEVLSRRTKNNPVLIGEPGVG 213
Query: 76 KTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDE 135
KTAIAEGLAQ I + +VP+T++ K+V++LDMG +VAGTKYRGEFEERLKK+MEEI+Q+
Sbjct: 214 KTAIAEGLAQAIVNNEVPETLKDKRVMSLDMGTVVAGTKYRGEFEERLKKVMEEIQQAGN 273
Query: 136 IILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERR 195
+ILFIDE+HTL+GAG AEGAIDA+NILKP+LARGELQCIGATTLDEYRK+IEKD ALERR
Sbjct: 274 VILFIDELHTLVGAGGAEGAIDASNILKPALARGELQCIGATTLDEYRKNIEKDAALERR 333
Query: 196 FQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAID 255
FQPV+V EPSV +T+ ILKGLR+RYE HH++ +DEA+ +A +LS +Y+SDRFLPDKAID
Sbjct: 334 FQPVQVDEPSVVDTVAILKGLRDRYEAHHRINISDEAIEAAVKLSNRYVSDRFLPDKAID 393
Query: 256 LIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQI 315
LIDEA S+VRL+ P +E+E+E+ ++ EK+ AV Q+FE A LRD++ L+ Q
Sbjct: 394 LIDEASSKVRLKSHTTPNNLKEIEQEIEKVKNEKDAAVHAQEFENAANLRDKQTKLEKQY 453
Query: 316 SALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLH 375
++ K + + ++E DI +++ WTGI + K++ ES++LL +E+TLH
Sbjct: 454 EEAKNEWKNAQNGMSTS------LSEEDIAEVIAGWTGITLTKINETESEKLLSLEDTLH 507
Query: 376 KRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEE 435
+RVIGQ +AV +IS+A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+ALA FG ++
Sbjct: 508 ERVIGQKDAVNSISKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGDDD 567
Query: 436 AMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVF 495
AMIR+DMSEFME+H VS+L+G+PPGYVG+ +GGQLTE VRR+PY+V+LFDEIEKAHPDVF
Sbjct: 568 AMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKVRRKPYSVILFDEIEKAHPDVF 627
Query: 496 NMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNR 555
N++LQ+L+DG LTD+KGRTVDF+NT++IMTSNVG+ ++ R GF D +D Y
Sbjct: 628 NILLQVLDDGHLTDTKGRTVDFRNTIIIMTSNVGAQELQD-QRFAGFGGSSDGQD--YET 684
Query: 556 IKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVT 615
I+ + +ELK FRPEFLNR+D++IVF +LTK E+KEI +M+ ++ +RL ++I + VT
Sbjct: 685 IRKTMLKELKNSFRPEFLNRVDDIIVFHKLTKEELKEIVTMMVNKLTNRLSEQNINIIVT 744
Query: 616 ERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVD 668
++ ++++ EEGY+P YGARPL RAI + +ED+++E +L EG V VD D
Sbjct: 745 DKAKDKIAEEGYDPEYGARPLIRAIQKTIEDNLSELILDGNQIEGKKVTVDHD 797
>gi|52145135|ref|YP_081693.1| negative regulator of genetic competence clpC/mecB (ATP-dependent
Clp protease) [Bacillus cereus E33L]
gi|51978604|gb|AAU20154.1| negative regulator of genetic competence clpC/mecB (ATP-dependent
Clp protease) [Bacillus cereus E33L]
Length = 811
Score = 795 bits (2054), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/669 (59%), Positives = 521/669 (77%), Gaps = 9/669 (1%)
Query: 5 STEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKN 64
S EA GG S+ PTL+ +LT +A E +LDPV+GR +I+RV+++L RRTKN
Sbjct: 144 SNEASSGHQGGSSTNANTPTLDSLARDLTVVARENRLDPVIGRGKEIQRVIEVLSRRTKN 203
Query: 65 NPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLK 124
NP LIGEPGVGKTAIAEGLAQ+I + +VP+T+ K+V+TLDMG +VAGTKYRGEFE+RLK
Sbjct: 204 NPVLIGEPGVGKTAIAEGLAQQIVNNEVPETLRDKRVMTLDMGTVVAGTKYRGEFEDRLK 263
Query: 125 KLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRK 184
K+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTLDEYRK
Sbjct: 264 KVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEYRK 323
Query: 185 HIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYI 244
+IEKD ALERRFQP+ V EPS+DE+ QILKGLR+RYE HH++ TD+A+ +A +LS +YI
Sbjct: 324 YIEKDAALERRFQPIHVDEPSLDESTQILKGLRDRYEAHHRVSITDDAIDAAVKLSDRYI 383
Query: 245 SDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGEL 304
+DRFLPDKAIDLIDEA S+VRLR P +ELE +L +I KEK+ AV+ Q+FEKA L
Sbjct: 384 TDRFLPDKAIDLIDEAASKVRLRSYTTPPNLKELEVKLEEIRKEKDAAVQSQEFEKAASL 443
Query: 305 RDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDES 364
RD E L+ ++ + KE E VT DI ++VS WT IPV K++ E+
Sbjct: 444 RDMEQRLREKLEDTKRQWKEQQGKENSE------VTVEDIANVVSTWTRIPVSKLAQTET 497
Query: 365 DRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAK 424
D+LL +E LH RVIGQDEAV A+++A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+
Sbjct: 498 DKLLNLESILHDRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELAR 557
Query: 425 ALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLF 484
ALA FG E+AMIR+DMSE+ME+H+ S+L+GSPPGYVGY EGGQLTE VRR+PY+VVL
Sbjct: 558 ALAESMFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPYSVVLL 617
Query: 485 DEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDL 544
DE+EKAHPDVFN++LQ+LEDGRLTDSKGRTVDF+NT++IMTSNVG+ +++ + +GF++
Sbjct: 618 DEVEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTIVIMTSNVGAEALKR-NKHLGFNV 676
Query: 545 DYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDR 604
+ +D Y+ +K V +ELK+ FRPEFLNR+DE+IVF L K ++EI +M+ ++ +R
Sbjct: 677 QDESRD--YSDMKGKVMDELKKAFRPEFLNRIDEIIVFHMLEKKHIQEIVTLMVNQLVNR 734
Query: 605 LKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVI 664
LK ++IELQ+TE + ++G++ YGARPLRRAI + +ED ++E++L I++G VI
Sbjct: 735 LKEQEIELQLTEGAISAIADKGFDREYGARPLRRAIQKHVEDRLSEELLKGAIEKGQKVI 794
Query: 665 VDVDSDGNV 673
DV+ + V
Sbjct: 795 FDVEGESFV 803
>gi|298242789|ref|ZP_06966596.1| ATPase AAA-2 domain protein [Ktedonobacter racemifer DSM 44963]
gi|297555843|gb|EFH89707.1| ATPase AAA-2 domain protein [Ktedonobacter racemifer DSM 44963]
Length = 843
Score = 795 bits (2054), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/660 (59%), Positives = 511/660 (77%), Gaps = 13/660 (1%)
Query: 20 NKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAI 79
+K PT+++ G +LT A G LDPV+GR +IERV+QIL RR KNNP LIGEPGVGKTAI
Sbjct: 161 SKTPTIDQMGIDLTAAARAGTLDPVIGRHQEIERVIQILSRRNKNNPALIGEPGVGKTAI 220
Query: 80 AEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILF 139
EGLAQR+ SG+VP+T+ K+++TLD+G LVAGTKYRGEFEERLKK++EEI+ S + I+F
Sbjct: 221 VEGLAQRLVSGEVPETLANKRLLTLDVGSLVAGTKYRGEFEERLKKIIEEIRNSRDCIIF 280
Query: 140 IDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPV 199
IDEVHTL+GAGAAEGA+DAANILKP+L+RGELQCIGATTLDEYRK+IE+D AL+RRFQ V
Sbjct: 281 IDEVHTLVGAGAAEGAVDAANILKPALSRGELQCIGATTLDEYRKYIERDAALQRRFQEV 340
Query: 200 KVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDE 259
+ EPSV+ETI+ILKG+RERYE HH+L TDEAL +A +++ +YI+DRF+PDKAIDLIDE
Sbjct: 341 IIREPSVEETIEILKGIRERYEQHHRLIITDEALRAATEMASRYITDRFMPDKAIDLIDE 400
Query: 260 AGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALV 319
A SRVR++++ P +E K L + +EK A++ Q++E A ELRDRE+ L+ +I+ L
Sbjct: 401 AASRVRMQNSLAPLNLKEAMKGLESVLREKEAAIQQQEYELAAELRDREVKLRERIAKL- 459
Query: 320 DKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVI 379
S + E G P V E +I IVS WTGIPV +++ +ES RLL+MEE LH RVI
Sbjct: 460 -----ESGWQKERGSDKPTVGEEEIAQIVSMWTGIPVMRIAQEESQRLLQMEEALHSRVI 514
Query: 380 GQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIR 439
GQ+EA++ ISRA+RRAR GLK+P RPI SFIF GPTGVGK+ELA+ LA + FGSEEA+I+
Sbjct: 515 GQNEAIEKISRAVRRARAGLKDPKRPIGSFIFMGPTGVGKTELARTLAEFMFGSEEALIK 574
Query: 440 LDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMML 499
+DMSEFMERH ++L+G+PPGYVGY EGGQLTEAVRR+ Y+V+L DEIEKAHPDVFNM+L
Sbjct: 575 IDMSEFMERHAAARLVGAPPGYVGYEEGGQLTEAVRRKSYSVILLDEIEKAHPDVFNMLL 634
Query: 500 QILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSS---YNRI 556
QILEDG+LTD+KGRTVDF+NT++IMTSNVG+S++ K +GF D+ ++ Y +
Sbjct: 635 QILEDGKLTDAKGRTVDFRNTVIIMTSNVGASLLNKEA-SMGFRQSKDKAKANQAEYESM 693
Query: 557 KSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTE 616
K V EL+ F+PEFLNR+DE+IVF L E+ I D++L V +L + +EL V +
Sbjct: 694 KGKVLGELRNTFKPEFLNRIDEVIVFHSLRMEEMYSIVDLLLNRVRTQLTEQQVELVVPQ 753
Query: 617 RFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSV---IVDVDSDGNV 673
++ ++E+G++P YGARPLRR I R++ED +AE +L + GD + IV+ D D V
Sbjct: 754 PAKDFLIEKGFDPQYGARPLRRTIQRMVEDPLAEGLLQGKFHPGDLIEASIVEGDLDLQV 813
>gi|294630658|ref|ZP_06709218.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Streptomyces
sp. e14]
gi|292833991|gb|EFF92340.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Streptomyces
sp. e14]
Length = 841
Score = 795 bits (2054), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/687 (58%), Positives = 530/687 (77%), Gaps = 16/687 (2%)
Query: 11 AGVGGGSSGNKMPTL--EEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCL 68
A GG + G +L +++G NLT+ A E KLDPV+GR+ +IERV+Q+L RRTKNNP L
Sbjct: 151 ATAGGPAEGTPSTSLVLDQFGRNLTQAARESKLDPVIGREKEIERVMQVLSRRTKNNPVL 210
Query: 69 IGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLME 128
IGEPGVGKTA+ EGLAQ I G+VP+T++ K + TLD+G LVAG++YRG+FEERLKK+++
Sbjct: 211 IGEPGVGKTAVVEGLAQAIVKGEVPETLKDKHLYTLDLGALVAGSRYRGDFEERLKKVLK 270
Query: 129 EIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEK 188
EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEYRKH+EK
Sbjct: 271 EIRTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIGATTLDEYRKHLEK 330
Query: 189 DPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRF 248
D ALERRFQP++V EPS+ TI+ILKGLR+RYE HH++ TDEALV AA L+ +YISDRF
Sbjct: 331 DAALERRFQPIQVAEPSLPHTIEILKGLRDRYEAHHRVSITDEALVQAATLADRYISDRF 390
Query: 249 LPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDRE 308
LPDKAIDLIDEAGSR+R+R P + RE ++++ + ++K A+ QDFEKA LRD+E
Sbjct: 391 LPDKAIDLIDEAGSRMRIRRMTAPPDLREFDEKIAGVRRDKESAIDSQDFEKAASLRDKE 450
Query: 309 MDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKVSTDESD 365
L A K + E +AGD+ VV EVD I +++ TGIPV K++ +ES
Sbjct: 451 KQLLA--------AKAKREKEWKAGDM-DVVAEVDGELIAEVLATATGIPVFKLTEEESS 501
Query: 366 RLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKA 425
RLL+ME+ LHKRVIGQ +AVKA+S+AIRR R GLK+P RP SFIF+GP+GVGK+EL+KA
Sbjct: 502 RLLRMEDELHKRVIGQVDAVKALSKAIRRTRAGLKDPKRPGGSFIFAGPSGVGKTELSKA 561
Query: 426 LAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFD 485
LA + FG E+A+I LDMSEF E+HTVS+L GSPPGYVGY EGGQLTE VRR+P++VVLFD
Sbjct: 562 LAEFLFGDEDALISLDMSEFSEKHTVSRLFGSPPGYVGYEEGGQLTEKVRRKPFSVVLFD 621
Query: 486 EIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLD 545
E+EKAHPD+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N+G+ I K G +GF
Sbjct: 622 EVEKAHPDIFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNLGTRDISK-GFNLGFAAS 680
Query: 546 YDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRL 605
D K ++Y R+K+ V++ELKQ+FRPEFLNR+D+++VF QLT+ ++ I D+M+ +V +RL
Sbjct: 681 GDTK-TNYERMKNKVSDELKQHFRPEFLNRVDDVVVFPQLTQEDILRIVDLMIGKVDERL 739
Query: 606 KTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIV 665
K +D+ +++++ +E + ++GY+P GARPLRR I R +ED+++EK+L E++ G V+V
Sbjct: 740 KDRDMGIELSQSAKELLAKKGYDPVLGARPLRRTIQREVEDTLSEKILFGELRPGHIVVV 799
Query: 666 DVDSDGNVTVLNGSSGAPESLADPLPV 692
D + +G+ +L D P+
Sbjct: 800 DTEGEGDDKTFTFRGEEKSALPDVPPI 826
>gi|425457129|ref|ZP_18836835.1| ATP-dependent Clp protease ATP-binding subunit clpA homolog
[Microcystis aeruginosa PCC 9807]
gi|389801614|emb|CCI19250.1| ATP-dependent Clp protease ATP-binding subunit clpA homolog
[Microcystis aeruginosa PCC 9807]
Length = 795
Score = 795 bits (2054), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 388/651 (59%), Positives = 496/651 (76%), Gaps = 45/651 (6%)
Query: 25 LEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLA 84
L +Y NL++ + GK+DPV+GR+P+IERV+QILGRR KNNP L+G PGVGKTAIAEGLA
Sbjct: 169 LAQYSRNLSQEVKNGKIDPVIGREPEIERVIQILGRRGKNNPILLGAPGVGKTAIAEGLA 228
Query: 85 QRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVH 144
QRI + D+P+ + K+VI LDMG L+AGT++RG+FEERLK ++EE+++S IILFIDE+H
Sbjct: 229 QRIYNSDIPELLRDKQVIALDMGSLLAGTRFRGDFEERLKGVVEEVRKSGNIILFIDEIH 288
Query: 145 TLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEP 204
TL+GAG+ GA+DA+N+LKP+LARGELQC+GATTLDEY++HIE+D ALERRFQPV V EP
Sbjct: 289 TLVGAGSMGGAMDASNLLKPALARGELQCLGATTLDEYKQHIERDAALERRFQPVMVGEP 348
Query: 205 SVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRV 264
+ ++ I+IL+GL+ YE H+++Y +A+ +A LS +YI+DRFLPDKAIDL+DEAGSR
Sbjct: 349 TKEQAIEILRGLKATYEDFHQVKYDQKAIEAAVNLSSRYINDRFLPDKAIDLLDEAGSRT 408
Query: 265 RLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKE 324
LR++ + E+ +E I E +L+
Sbjct: 409 HLRYSLQSKSPAEVSEESPLINPE----------------------------SLI----- 435
Query: 325 MSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEA 384
PVV +I IV+AWTGIPV +++ ES+ LL +E LH+R+IGQ EA
Sbjct: 436 ------------PVVDAEEIAQIVAAWTGIPVTQLTETESESLLNLEYQLHERIIGQQEA 483
Query: 385 VKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSE 444
V A+SRAIRRARV LKNPNRPIASFIF+GPTGVGK+EL KALA FGSE +MIRLDMSE
Sbjct: 484 VNAVSRAIRRARVNLKNPNRPIASFIFAGPTGVGKTELTKALAKLLFGSESSMIRLDMSE 543
Query: 445 FMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILED 504
FME HTVSKLIG+PPGY+GY EGGQLTEAVRR+PY VVLFDEIEKAHPDVFN++LQ+LED
Sbjct: 544 FMESHTVSKLIGAPPGYIGYNEGGQLTEAVRRQPYRVVLFDEIEKAHPDVFNLLLQLLED 603
Query: 505 GRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEEL 564
GRLTDS+GR VDFKNTL+IMTSN+GS VIEKGG +GF++ D S Y +I + VT+EL
Sbjct: 604 GRLTDSQGRRVDFKNTLIIMTSNIGSKVIEKGGNSLGFEIADDFAQSRYQQISNRVTDEL 663
Query: 565 KQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVE 624
KQYFRPEFLNRLDE+IVFRQLT+ EV +IADI++ ++ +L K I ++VT F++ V+
Sbjct: 664 KQYFRPEFLNRLDEIIVFRQLTREEVTQIADILIADIAKQLTEKGISVEVTAAFKDLVIN 723
Query: 625 EGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTV 675
EGY+PSYGARPLRRA+ R LEDS+AE ML+ ++ GD ++DV ++ VTV
Sbjct: 724 EGYDPSYGARPLRRALTRRLEDSLAEAMLSGKVNSGDHALLDVTAEAVVTV 774
>gi|408678941|ref|YP_006878768.1| ATP-dependent Clp protease [Streptomyces venezuelae ATCC 10712]
gi|328883270|emb|CCA56509.1| ATP-dependent Clp protease [Streptomyces venezuelae ATCC 10712]
Length = 840
Score = 795 bits (2054), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/688 (58%), Positives = 528/688 (76%), Gaps = 16/688 (2%)
Query: 10 GAGVGGGSSGNKMPTL--EEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPC 67
A GG + G +L +++G NLT+ A E KLDPV+GR+ +IERV+Q+L RRTKNNP
Sbjct: 150 AATAGGPAEGTPSTSLVLDQFGRNLTQAARESKLDPVIGREKEIERVMQVLSRRTKNNPV 209
Query: 68 LIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLM 127
LIGEPGVGKTA+ EGLAQ I G+VP+T++ K + TLD+G LVAG++YRG+FEERLKK++
Sbjct: 210 LIGEPGVGKTAVVEGLAQAIVKGEVPETLKDKHLYTLDLGALVAGSRYRGDFEERLKKVL 269
Query: 128 EEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIE 187
+EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEYRK++E
Sbjct: 270 KEIRTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIGATTLDEYRKYLE 329
Query: 188 KDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDR 247
KD ALERRFQP++V EPS+ TI+ILKGLR+RYE HH++ TDEALV AA L+ +YISDR
Sbjct: 330 KDAALERRFQPIQVAEPSLPHTIEILKGLRDRYEAHHRVSITDEALVQAATLADRYISDR 389
Query: 248 FLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDR 307
FLPDKAIDLIDEAGSR+R+R P + RE ++++ + ++K A+ QDFEKA LRD+
Sbjct: 390 FLPDKAIDLIDEAGSRMRIRRMTAPPDLREFDEKIAGVRRDKESAIDSQDFEKAASLRDK 449
Query: 308 EMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKVSTDES 364
E L A K + E +AGD+ VV EVD I +++ TGIPV K++ +ES
Sbjct: 450 EKQLLA--------AKAKREKEWKAGDM-DVVAEVDGDLIAEVLATATGIPVFKLTEEES 500
Query: 365 DRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAK 424
RLL+ME+ LHKRVIGQ +AV +SRAIRR R GLK+P RP SFIF+GP+GVGK+EL+K
Sbjct: 501 SRLLRMEDELHKRVIGQKDAVIGLSRAIRRTRAGLKDPKRPGGSFIFAGPSGVGKTELSK 560
Query: 425 ALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLF 484
ALA + FG E+AMI LDMSEF E+HTVS+L GSPPGYVGY EGGQLTE VRR+P++VVLF
Sbjct: 561 ALAEFLFGDEDAMISLDMSEFSEKHTVSRLFGSPPGYVGYEEGGQLTEKVRRKPFSVVLF 620
Query: 485 DEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDL 544
DE+EKAHPD+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N+G+ I K G +GF
Sbjct: 621 DEVEKAHPDIFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNLGTRDISK-GFNLGFAA 679
Query: 545 DYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDR 604
D K S+Y R+K+ V++ELKQ+FRPEFLNR+D++IVF QLT+ ++ +I D+M+ V +R
Sbjct: 680 QGDTK-SNYERMKAKVSDELKQHFRPEFLNRVDDIIVFPQLTQDDILQIVDLMISRVDER 738
Query: 605 LKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVI 664
LK +D+ +++++ +E + ++GY+P GARPLRR I R +EDS++EK+L E++ G V+
Sbjct: 739 LKDRDMGIELSQSAKELLAKKGYDPVMGARPLRRTIQREIEDSLSEKILFGELRPGHIVV 798
Query: 665 VDVDSDGNVTVLNGSSGAPESLADPLPV 692
VD + +G+ +L D P+
Sbjct: 799 VDTEGEGDERTFTFRGEEKTALPDAPPI 826
>gi|381184365|ref|ZP_09892990.1| ClpC ATPase [Listeriaceae bacterium TTU M1-001]
gi|380315745|gb|EIA19239.1| ClpC ATPase [Listeriaceae bacterium TTU M1-001]
Length = 820
Score = 795 bits (2054), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/665 (58%), Positives = 521/665 (78%), Gaps = 10/665 (1%)
Query: 11 AGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIG 70
A G ++ PTL+ +LT +A E LDPV+GR +I+RV+++L RRTKNNP LIG
Sbjct: 148 AASGRQTNTQATPTLDSLARDLTVIAREENLDPVIGRAKEIQRVIEVLSRRTKNNPVLIG 207
Query: 71 EPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEI 130
EPGVGKTAIAEGLAQ+I +VP+T+ GK+V+TLDMG +VAGTKYRGEFE+RLKK+M+EI
Sbjct: 208 EPGVGKTAIAEGLAQQIVRNEVPETLRGKRVMTLDMGTVVAGTKYRGEFEDRLKKVMDEI 267
Query: 131 KQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDP 190
+Q+ +ILFIDE+HTLIGAG AEGAIDA+NILKP LARGELQCIGATTLDEYRK+IEKD
Sbjct: 268 RQAGNVILFIDELHTLIGAGGAEGAIDASNILKPPLARGELQCIGATTLDEYRKYIEKDA 327
Query: 191 ALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLP 250
ALERRFQP+KV EPSV+E+IQIL GLR+RYE HH++ TD+AL +A +LS +YISDRFLP
Sbjct: 328 ALERRFQPIKVDEPSVEESIQILHGLRDRYEAHHRVAITDDALDAAVRLSDRYISDRFLP 387
Query: 251 DKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMD 310
DKAID+IDEAGS+VRL+ P + +E+E EL ++ KEK+ AV+GQ+FEKA RDRE
Sbjct: 388 DKAIDVIDEAGSKVRLKAYTTPTDLKEMELELSELKKEKDAAVQGQEFEKAASFRDREHK 447
Query: 311 LKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKM 370
L+ + +++S E + D VTE + +V++WTGIPV K++ E+D+LL M
Sbjct: 448 LRKSLEE-----EKLSWKEKQGRD-NSQVTEDIVAEVVASWTGIPVMKLAETETDKLLNM 501
Query: 371 EETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYY 430
E+ LH+RVIGQDEAVKA+S A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+ALA
Sbjct: 502 EKLLHERVIGQDEAVKAVSLAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESM 561
Query: 431 FGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKA 490
FG E+AMIR+DMSE+ME+ + ++L+G+PPGYVGY EGGQLTE VR++PY+VVL DEIEKA
Sbjct: 562 FGDEDAMIRVDMSEYMEKFSTARLVGAPPGYVGYEEGGQLTEKVRQKPYSVVLLDEIEKA 621
Query: 491 HPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKD 550
HPDVFNM+LQ+L+DGRLTDSKGR VDF+NT++IMTSN+G+ + K + +GF++ KD
Sbjct: 622 HPDVFNMLLQVLDDGRLTDSKGRVVDFRNTVIIMTSNIGAQEM-KVDKSMGFNVTDVTKD 680
Query: 551 SSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDI 610
+ ++ V +ELK+ FRPEF+NR+DE IVF LT+ E+K+I ++ ++ RL +DI
Sbjct: 681 --HKAMEHRVLQELKKAFRPEFINRIDETIVFHSLTEKELKQIVTLLTGQLTKRLAERDI 738
Query: 611 ELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSD 670
+++T+ + ++ +EGY+P YGARPL+RAI + +ED ++E++L ++ GD++ + V D
Sbjct: 739 HVKLTDGAKSKIAKEGYDPEYGARPLKRAIQKNIEDRLSEELLRGNVQVGDTIEIGV-KD 797
Query: 671 GNVTV 675
G + V
Sbjct: 798 GELEV 802
>gi|441154708|ref|ZP_20966583.1| ATPase AAA [Streptomyces rimosus subsp. rimosus ATCC 10970]
gi|440618124|gb|ELQ81204.1| ATPase AAA [Streptomyces rimosus subsp. rimosus ATCC 10970]
Length = 839
Score = 795 bits (2053), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/688 (58%), Positives = 526/688 (76%), Gaps = 16/688 (2%)
Query: 10 GAGVGGGSSGNKMPTL--EEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPC 67
A GG + G +L +++G NLT+ A E KLDPV+GR+ +IERV+Q+L RRTKNNP
Sbjct: 150 AATAGGPAEGTPSTSLVLDQFGRNLTQAARETKLDPVIGREKEIERVMQVLSRRTKNNPV 209
Query: 68 LIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLM 127
LIGEPGVGKTA+ EGLAQ I G+VP+T++ K + TLD+G LVAG++YRG+FEERLKK++
Sbjct: 210 LIGEPGVGKTAVVEGLAQAIVKGEVPETLKDKHLYTLDLGALVAGSRYRGDFEERLKKVL 269
Query: 128 EEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIE 187
+EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEYRK++E
Sbjct: 270 KEIRTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIGATTLDEYRKYLE 329
Query: 188 KDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDR 247
KD ALERRFQP++V EPS+ TI+ILKGLR+RYE HH++ TDEALV AAQL+ +YISDR
Sbjct: 330 KDAALERRFQPIQVAEPSLPHTIEILKGLRDRYEAHHRVSITDEALVQAAQLADRYISDR 389
Query: 248 FLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDR 307
FLPDKAIDLIDEAGSR+R+R P + RE ++++ + +EK A+ QDFE A LRD+
Sbjct: 390 FLPDKAIDLIDEAGSRMRIRRMTAPPDLREFDEKIADVRREKESAIDSQDFEMAAGLRDK 449
Query: 308 EMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKVSTDES 364
E L A K + E +AGD+ VV EVD I +++ TGIPV K++ +ES
Sbjct: 450 EKQLLA--------AKAKREKEWKAGDM-DVVAEVDGELIAEVLATATGIPVFKLTEEES 500
Query: 365 DRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAK 424
RLL+ME+ LHKRVIGQ +A+KA+S+AIRR R GLK+P RP SFIF+GP+GVGK+EL+K
Sbjct: 501 SRLLRMEDELHKRVIGQKDAIKALSQAIRRTRAGLKDPKRPGGSFIFAGPSGVGKTELSK 560
Query: 425 ALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLF 484
LA + FG E+AMI LDMSEF E+HTVS+L GSPPGYVGY EGGQLTE VRR+P++VVLF
Sbjct: 561 TLAEFLFGDEDAMISLDMSEFSEKHTVSRLFGSPPGYVGYEEGGQLTEKVRRKPFSVVLF 620
Query: 485 DEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDL 544
DE+EKAHPD+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N+G+ I K G +GF
Sbjct: 621 DEVEKAHPDIFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNLGTRDISK-GFNLGFAA 679
Query: 545 DYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDR 604
D K SSY R+K+ V EELKQ+FRPEFLNR+D+ +VF QLT+ ++ +I D+M+ +V +R
Sbjct: 680 QGDTK-SSYERMKNKVNEELKQHFRPEFLNRVDDTVVFHQLTEEDIIQIVDLMIAKVDER 738
Query: 605 LKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVI 664
LK +D+ ++++ ++ + + GY+P GARPLRR I R +ED+++EK+L E++ G V+
Sbjct: 739 LKDRDMGIELSGEAKKLLAKRGYDPVLGARPLRRTIQREIEDALSEKILFSELRPGHIVV 798
Query: 665 VDVDSDGNVTVLNGSSGAPESLADPLPV 692
VD++ +G +L D PV
Sbjct: 799 VDIEGEGENAKFTFRGEEKSALPDAPPV 826
>gi|170757820|ref|YP_001783151.1| negative regulator of genetic competence MecB/ClpC [Clostridium
botulinum B1 str. Okra]
gi|429246823|ref|ZP_19210119.1| negative regulator of genetic competence MecB/ClpC [Clostridium
botulinum CFSAN001628]
gi|169123032|gb|ACA46868.1| putative negative regulator of genetic competence MecB/ClpC
[Clostridium botulinum B1 str. Okra]
gi|428756157|gb|EKX78733.1| negative regulator of genetic competence MecB/ClpC [Clostridium
botulinum CFSAN001628]
Length = 811
Score = 795 bits (2053), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 388/649 (59%), Positives = 525/649 (80%), Gaps = 8/649 (1%)
Query: 23 PTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEG 82
PTL+++G +LT++AEEGK+DPV+GR + +RV++IL RRTKNNPCLIGEPGVGKTAIAEG
Sbjct: 163 PTLDQFGRDLTEMAEEGKVDPVIGRDKETQRVLEILCRRTKNNPCLIGEPGVGKTAIAEG 222
Query: 83 LAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDE 142
LAQ I G++P+ ++ K+V+TLD+ ++AG KYRGEFE+RLKK+MEE++ S + ILFIDE
Sbjct: 223 LAQNIIDGNIPEILKNKRVVTLDLTSMIAGAKYRGEFEDRLKKIMEEVRSSKDTILFIDE 282
Query: 143 VHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVP 202
+HT++GAGAAEGAIDAANILKP+LARGE+QCIGATTLDEYRK+IEKD ALERRFQP+ V
Sbjct: 283 IHTIVGAGAAEGAIDAANILKPALARGEIQCIGATTLDEYRKYIEKDSALERRFQPINVG 342
Query: 203 EPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGS 262
EP+ +ETI+ILKGLR++YE HH++++TD+A+ +A LS +YI DRFLPDKAIDL+DEAGS
Sbjct: 343 EPTKEETIEILKGLRDKYEAHHRVKFTDDAIYAAVNLSDRYIRDRFLPDKAIDLMDEAGS 402
Query: 263 RVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKG 322
+VR+++ P + + +E++L ++ KEK +A+R QDFEKA LRD+E +LK ++ L
Sbjct: 403 KVRIQNLIAPPDLKNIEEQLDKVVKEKEDAIRVQDFEKAANLRDKEKELKEKLEGLKKDW 462
Query: 323 KEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQD 382
AE E ++ +V+E I +VS WT IPV K++ ES+RLLK+E+ LH RVIGQ+
Sbjct: 463 ----NAEKEGSNL--IVSEQQIAAVVSNWTNIPVNKLTEKESERLLKLEDILHNRVIGQE 516
Query: 383 EAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDM 442
EA+K++SR++RRARVGLK+P RPI SFIF GPTGVGK+EL KALA FG+E MIR+DM
Sbjct: 517 EAIKSVSRSVRRARVGLKDPKRPIGSFIFLGPTGVGKTELTKALAEAMFGNENNMIRVDM 576
Query: 443 SEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQIL 502
SE+ME+H+VS+LIGSPPGYVG+ EGGQLT+ VR PY+VVLFDEIEKAHP+VFN++LQIL
Sbjct: 577 SEYMEKHSVSRLIGSPPGYVGHDEGGQLTDKVRTNPYSVVLFDEIEKAHPEVFNILLQIL 636
Query: 503 EDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDY-DEKDSSYNRIKSLVT 561
EDGRLTD KG+TVDF+NT++IMTSNVG+S I + + +GF+ +E+++ Y ++K +
Sbjct: 637 EDGRLTDGKGKTVDFRNTIIIMTSNVGASTISR-QKTLGFNTSIEEERETEYEKMKDNIM 695
Query: 562 EELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRER 621
ELK FRPEFLNR+D++IVF QL + ++EI +MLK V +R+K + I+L+ TE +
Sbjct: 696 NELKHSFRPEFLNRIDDIIVFHQLREEHIREIVKLMLKTVSNRVKDQGIKLEFTEEAEKI 755
Query: 622 VVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSD 670
+ +EGY+ +YGARPLRRAI +++ED ++E++L IK+GDSV V+ D
Sbjct: 756 LAKEGYDTNYGARPLRRAITKIVEDKLSEEILKGNIKKGDSVKVNTIED 804
>gi|291303744|ref|YP_003515022.1| ATPase AAA-2 domain-containing protein [Stackebrandtia nassauensis
DSM 44728]
gi|290572964|gb|ADD45929.1| ATPase AAA-2 domain protein [Stackebrandtia nassauensis DSM 44728]
Length = 854
Score = 795 bits (2052), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 394/674 (58%), Positives = 523/674 (77%), Gaps = 18/674 (2%)
Query: 4 ESTEAVGAGVGGGSSGNKM----PTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 59
+ E GA GG +SG + P L+++G NLT+ A +GKLDPV+GR+ +IERV+Q+L
Sbjct: 146 QGKEPAGATAGGSASGEQSQSSSPVLDQFGRNLTQAARDGKLDPVIGREKEIERVMQVLS 205
Query: 60 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 119
RR+KNNP LIGEPGVGKTA EGLAQ I G VP+T++ K + TLD+G LVAG++YRG+F
Sbjct: 206 RRSKNNPVLIGEPGVGKTAAVEGLAQAIVKGSVPETLKDKHLYTLDLGALVAGSRYRGDF 265
Query: 120 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 179
EERLKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTL
Sbjct: 266 EERLKKVLKEIRTRGDIILFIDEIHTLVGAGAAEGAIDAASILKPMLARGELQTIGATTL 325
Query: 180 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 239
DEYRKH+EKD ALERRFQP++V EPS+ TI+ILKGLR+RYE HH++ TD ALV+AA L
Sbjct: 326 DEYRKHLEKDAALERRFQPIQVAEPSLSHTIEILKGLRDRYEAHHRVSITDGALVAAATL 385
Query: 240 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 299
+ +YISDRFLPDKAIDLIDEAG+R+R+R P + RE ++ + Q K+K A+ QDFE
Sbjct: 386 ADRYISDRFLPDKAIDLIDEAGARMRIRRMTAPPDLREFDERIAQARKDKESAIDAQDFE 445
Query: 300 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPV 356
+A +LRD E L+ Q +E + E +AGD+ VTEVD I +++ WTGIPV
Sbjct: 446 RAAQLRDNEKQLQDQ--------REKREKEWKAGDL-DTVTEVDDEMIAEVLANWTGIPV 496
Query: 357 EKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTG 416
K++ +E+ RLLKMEE LHKR+IGQ +AVKA+S+AIRR R GLK+P RP SFIF+GP+G
Sbjct: 497 YKLTEEETSRLLKMEEELHKRIIGQHDAVKAVSQAIRRTRAGLKDPKRPSGSFIFAGPSG 556
Query: 417 VGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRR 476
VGKSEL+KALA + FGSE+A+I+LDMSEF +R+TVS+L+G+PPGYVGY EGGQLTE VRR
Sbjct: 557 VGKSELSKALAEFLFGSEDALIQLDMSEFHDRYTVSRLVGAPPGYVGYDEGGQLTEKVRR 616
Query: 477 RPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKG 536
+P++VVLFDEIEKAH +VFN +LQILEDGRLTD +GR VDFKNT+LI+T+N+G+ + K
Sbjct: 617 KPFSVVLFDEIEKAHSEVFNTLLQILEDGRLTDGQGRIVDFKNTVLILTTNLGTKDVAK- 675
Query: 537 GRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADI 596
+GF + +D Y R+K V +ELKQ+FRPEFLNR+D+ IVF +L++ E+ +I D+
Sbjct: 676 AVSLGFQAETGGED-DYERMKLKVNDELKQHFRPEFLNRIDDTIVFPKLSENEIIKIVDL 734
Query: 597 MLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLARE 656
M+ + ++LK +D+ +++T+ +E + +GY+P GARPLRR I R +ED+++EK+L E
Sbjct: 735 MVARIEEQLKNRDMSMEITQAAKEFLGHKGYDPVLGARPLRRTIQREIEDTLSEKILFDE 794
Query: 657 IKEGDSVIVDVDSD 670
+ G V+VD + D
Sbjct: 795 LVPGQIVVVDCEGD 808
>gi|114567873|ref|YP_755027.1| ATPase [Syntrophomonas wolfei subsp. wolfei str. Goettingen]
gi|114338808|gb|ABI69656.1| ATPases with chaperone activity, ATP-binding subunit
[Syntrophomonas wolfei subsp. wolfei str. Goettingen]
Length = 828
Score = 795 bits (2052), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 388/648 (59%), Positives = 522/648 (80%), Gaps = 10/648 (1%)
Query: 20 NKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAI 79
+K PTL+ + +LT+ A EG+LDPV+GR +IERV+QIL RRTKNNP LIG+PGVGKTAI
Sbjct: 176 SKTPTLDSFSRDLTQDASEGRLDPVIGRNNEIERVIQILSRRTKNNPVLIGDPGVGKTAI 235
Query: 80 AEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILF 139
EGLAQRI +P+ + K+V+ LD+ +VAGTKYRGEFEERL +++ EIK S ++I+F
Sbjct: 236 VEGLAQRIMDNQIPEILSNKRVVALDLSAMVAGTKYRGEFEERLTRIVNEIKSSGDVIVF 295
Query: 140 IDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPV 199
IDE+HT++GAGAAEGAIDAANILKPSLARGE QC+GATTL+EYRKH+EKD ALERRFQP+
Sbjct: 296 IDELHTIVGAGAAEGAIDAANILKPSLARGEFQCVGATTLNEYRKHVEKDAALERRFQPI 355
Query: 200 KVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDE 259
V EPS++E+I+ILKGLR+RYE HH ++ DEA+ +AA+LS +YISDRFLPDKAIDLIDE
Sbjct: 356 LVEEPSIEESIEILKGLRDRYEAHHGVKIGDEAIEAAAKLSARYISDRFLPDKAIDLIDE 415
Query: 260 AGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALV 319
A SRVRL + +PE+ ++ E +L + KEK EA+ GQ++EKA LRD E L+ +I
Sbjct: 416 ASSRVRLANYIIPEDLKKKESQLEDLIKEKEEAINGQEYEKAARLRDEEQKLRDEIE--- 472
Query: 320 DKGKEMSKAET-EAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRV 378
++ KE S + AG VG E +I +VS+W+GIPV K++ +ES+RL++ME+ LH+RV
Sbjct: 473 NERKEWSSQRSLNAGSVG----EDEIAAVVSSWSGIPVNKLAEEESERLVQMEDVLHQRV 528
Query: 379 IGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMI 438
IGQ+EAVKA+SRA+RRAR GLKNP RPI SF+F GPTGVGK+ELA++LA FGSE+A+I
Sbjct: 529 IGQEEAVKAVSRAVRRARAGLKNPKRPIGSFVFLGPTGVGKTELARSLAEAMFGSEDAII 588
Query: 439 RLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMM 498
RLDMSE+ME+H VS++IGSPPGYVGY EGGQLTE VRR+PY+V+L DEIEKAHPDVFN++
Sbjct: 589 RLDMSEYMEKHAVSRMIGSPPGYVGYDEGGQLTEKVRRKPYSVILLDEIEKAHPDVFNIL 648
Query: 499 LQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKS 558
LQ++EDGRLTD +GRTVDF+NT++IMTSNVG+ I K +++GF DE Y+++K
Sbjct: 649 LQVMEDGRLTDGQGRTVDFRNTVVIMTSNVGADSI-KNSKKVGFTRAIDEA-HDYSQMKE 706
Query: 559 LVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERF 618
V E+LK F+PEF+NR+DE+IVF+ L + E+KEI D++L ++ +R+K ++++
Sbjct: 707 RVMEQLKHTFKPEFMNRIDEIIVFQNLNEQELKEIVDLLLLDLKERVKENGYGMEISPAA 766
Query: 619 RERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVD 666
RE +++EGY+P++GARPL+RAI +L+EDS++E++L + + GD ++VD
Sbjct: 767 RELILKEGYDPAFGARPLKRAIQKLVEDSISEEILKKNLLPGDKILVD 814
>gi|296333083|ref|ZP_06875537.1| class III stress response-related ATPase, AAA+ superfamily protein
[Bacillus subtilis subsp. spizizenii ATCC 6633]
gi|305672785|ref|YP_003864456.1| class III stress response-related ATPase, AAA+ superfamily protein
[Bacillus subtilis subsp. spizizenii str. W23]
gi|350264184|ref|YP_004875491.1| genetic competence negative regulator ClpC/MecB [Bacillus subtilis
subsp. spizizenii TU-B-10]
gi|296149699|gb|EFG90594.1| class III stress response-related ATPase, AAA+ superfamily protein
[Bacillus subtilis subsp. spizizenii ATCC 6633]
gi|305411028|gb|ADM36146.1| class III stress response-related ATPase, AAA+ superfamily protein
[Bacillus subtilis subsp. spizizenii str. W23]
gi|349597071|gb|AEP84859.1| Negative regulator of genetic competence ClpC/MecB [Bacillus
subtilis subsp. spizizenii TU-B-10]
Length = 810
Score = 794 bits (2051), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/667 (59%), Positives = 519/667 (77%), Gaps = 10/667 (1%)
Query: 9 VGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCL 68
G+ G +S PTL+ +LT +A+E LDPV+GR +I+RV+++L RRTKNNP L
Sbjct: 147 TGSSATGTNSNANTPTLDSLARDLTAIAKEDSLDPVIGRSKEIQRVIEVLSRRTKNNPVL 206
Query: 69 IGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLME 128
IGEPGVGKTAIAEGLAQ+I + +VP+ + K+V+TLDMG +VAGTKYRGEFE+RLKK+M+
Sbjct: 207 IGEPGVGKTAIAEGLAQQIINNEVPEILRDKRVMTLDMGTVVAGTKYRGEFEDRLKKVMD 266
Query: 129 EIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEK 188
EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTLDEYRK+IEK
Sbjct: 267 EIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEYRKYIEK 326
Query: 189 DPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRF 248
D ALERRFQP++V +PS DE+IQILKGLR+RYE HH++ TD+A+ +A +LS +YISDRF
Sbjct: 327 DAALERRFQPIQVDQPSADESIQILKGLRDRYEAHHRVSITDDAIEAAVKLSDRYISDRF 386
Query: 249 LPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDRE 308
LPDKAIDLIDEAGS+VRLR P +ELE++L ++ KEK+ AV+ Q+FEKA LRD E
Sbjct: 387 LPDKAIDLIDEAGSKVRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFEKAASLRDTE 446
Query: 309 MDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLL 368
L+ Q+ KE + G VT DI +VS+WTG+PV K++ E+D+LL
Sbjct: 447 QRLREQVEDTKKSWKE------KQGQENSEVTVDDIAMVVSSWTGVPVSKIAQTETDKLL 500
Query: 369 KMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAA 428
ME LH RVIGQDEAV A+++A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+ALA
Sbjct: 501 NMESILHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAE 560
Query: 429 YYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIE 488
FG EEAMIR+DMSE+ME+H+ S+L+GSPPGYVGY EGGQLTE VRR+PY+VVL DEIE
Sbjct: 561 SIFGDEEAMIRIDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPYSVVLLDEIE 620
Query: 489 KAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDE 548
KAHPDVFN++LQ+LEDGRLTDSKGRTVDF+NT+LIMTSNVG+S +++ + +GF++ +
Sbjct: 621 KAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTILIMTSNVGASELKR-NKYVGFNV--QD 677
Query: 549 KDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTK 608
+ ++ +K V ELK+ FRPEF+NR+DE+IVF L K + EI +M ++ RLK +
Sbjct: 678 ETQNHKDMKDKVMGELKRAFRPEFINRIDEIIVFHSLEKKHLTEIVSLMSDQLTKRLKEQ 737
Query: 609 DIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVD 668
D+ +++T+ + +V EEG + YGARPLRRAI + +ED ++E++L I +G +++DV+
Sbjct: 738 DLSIELTDAAKAKVAEEGVDLEYGARPLRRAIQKHVEDRLSEELLRGNIHKGQHIVLDVE 797
Query: 669 SDGNVTV 675
DG V
Sbjct: 798 -DGEFVV 803
>gi|229083400|ref|ZP_04215749.1| Negative regulator of genetic competence [Bacillus cereus Rock3-44]
gi|228699909|gb|EEL52545.1| Negative regulator of genetic competence [Bacillus cereus Rock3-44]
Length = 811
Score = 794 bits (2051), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/669 (59%), Positives = 523/669 (78%), Gaps = 9/669 (1%)
Query: 5 STEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKN 64
S EA GG S+ PTL+ +LT +A EG+LDPV+GR +I+RV+++L RRTKN
Sbjct: 144 SNEATSGHQGGASANANTPTLDSLARDLTVVAREGRLDPVIGRSKEIQRVIEVLSRRTKN 203
Query: 65 NPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLK 124
NP LIGEPGVGKTAIAEGLAQ+I + +VP+T+ K+V+TLDMG +VAGTKYRGEFE+RLK
Sbjct: 204 NPVLIGEPGVGKTAIAEGLAQQIVNNEVPETLRDKRVMTLDMGTVVAGTKYRGEFEDRLK 263
Query: 125 KLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRK 184
K+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTLDEYRK
Sbjct: 264 KVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEYRK 323
Query: 185 HIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYI 244
+IEKD ALERRFQP+ V EPS++E+IQILKGLR+RYE HH++ TD+A+ +A +LS +YI
Sbjct: 324 YIEKDAALERRFQPIHVDEPSLEESIQILKGLRDRYEAHHRVSITDDAIDAAVKLSDRYI 383
Query: 245 SDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGEL 304
+DRFLPDKAIDLIDEA S+VRLR P +ELE +L +I KEK+ AV+ Q+FEKA L
Sbjct: 384 TDRFLPDKAIDLIDEAASKVRLRSYTTPPNLKELEVKLEEIRKEKDAAVQSQEFEKAASL 443
Query: 305 RDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDES 364
RD E L+ ++ + KE E VT DI ++VS WT IPV K++ E+
Sbjct: 444 RDMEQRLREKLEDTKRQWKEQQGKENSE------VTVEDIANVVSTWTRIPVSKLAQTET 497
Query: 365 DRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAK 424
++LL +E LH RVIGQDEAV A+++A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+
Sbjct: 498 NKLLNLESILHDRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELAR 557
Query: 425 ALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLF 484
ALA FG E+AMIR+DMSE+ME+H+ S+L+GSPPGYVGY EGGQLTE VRR+PY+VVL
Sbjct: 558 ALAESMFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPYSVVLL 617
Query: 485 DEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDL 544
DE+EKAHPDVFN++LQ+LEDGRLTDSKGRTVDF+NT++IMTSNVG+ +++ + +GF++
Sbjct: 618 DEVEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTIVIMTSNVGAEALKR-NKHLGFNV 676
Query: 545 DYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDR 604
+ +D Y+ +K V +ELK+ FRPEFLNR+DE+IVF L K ++EI +M+ ++ +R
Sbjct: 677 QDEGRD--YSDMKGKVMDELKKAFRPEFLNRIDEIIVFHMLEKKHIQEIVTLMVNQLVNR 734
Query: 605 LKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVI 664
LK ++IEL++T + E + ++G++ YGARPLRRAI + +ED ++E++L I++G V+
Sbjct: 735 LKEQEIELELTSKAIEAIADKGFDREYGARPLRRAIQKHVEDRLSEELLKGAIEKGQKVV 794
Query: 665 VDVDSDGNV 673
D + + V
Sbjct: 795 FDAEGESFV 803
>gi|226950963|ref|YP_002806054.1| negative regulator of genetic competence MecB/ClpC [Clostridium
botulinum A2 str. Kyoto]
gi|226843529|gb|ACO86195.1| negative regulator of genetic competence MecB/ClpC [Clostridium
botulinum A2 str. Kyoto]
Length = 811
Score = 794 bits (2051), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 388/649 (59%), Positives = 524/649 (80%), Gaps = 8/649 (1%)
Query: 23 PTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEG 82
PTL+++G +LT++AEEGK+DPV+GR + +RV++IL RRTKNNPCLIGEPGVGKTAIAEG
Sbjct: 163 PTLDQFGRDLTEMAEEGKVDPVIGRDKETQRVLEILCRRTKNNPCLIGEPGVGKTAIAEG 222
Query: 83 LAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDE 142
LAQ I G++P+ ++ K+V+TLD+ ++AG KYRGEFE+RLKK+MEE++ S + ILFIDE
Sbjct: 223 LAQNIIDGNIPEILKNKRVVTLDLTSMIAGAKYRGEFEDRLKKIMEEVRSSKDTILFIDE 282
Query: 143 VHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVP 202
+HT++GAGAAEGAIDAANILKP+LARGE+QCIGATTLDEYRK+IEKD ALERRFQP+ V
Sbjct: 283 IHTIVGAGAAEGAIDAANILKPALARGEIQCIGATTLDEYRKYIEKDSALERRFQPINVG 342
Query: 203 EPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGS 262
EP+ +ETI+ILKGLR++YE HH++++TD+A+ +A LS +YI DRFLPDKAIDL+DEAGS
Sbjct: 343 EPTKEETIEILKGLRDKYEAHHRVKFTDDAIYAAVNLSDRYIRDRFLPDKAIDLMDEAGS 402
Query: 263 RVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKG 322
+VR+++ P + + +E++L ++ KEK +A+R QDFEKA LRD+E +LK ++ L
Sbjct: 403 KVRIQNLIAPPDLKNIEEQLDKVVKEKEDAIRVQDFEKAANLRDKEKELKEKLEGLKKDW 462
Query: 323 KEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQD 382
AE E ++ +V+E I +VS WT IPV K++ ES+RLLK+E LH RVIGQ+
Sbjct: 463 ----NAEKEGSNL--IVSEQQIAAVVSNWTNIPVNKLTEKESERLLKLENILHNRVIGQE 516
Query: 383 EAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDM 442
EA+K++SR++RRARVGLK+P RPI SFIF GPTGVGK+EL KALA FG+E MIR+DM
Sbjct: 517 EAIKSVSRSVRRARVGLKDPKRPIGSFIFLGPTGVGKTELTKALAEAMFGNENNMIRVDM 576
Query: 443 SEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQIL 502
SE+ME+H+VS+LIGSPPGYVG+ EGGQLT+ VR PY+VVLFDEIEKAHP+VFN++LQIL
Sbjct: 577 SEYMEKHSVSRLIGSPPGYVGHDEGGQLTDKVRTNPYSVVLFDEIEKAHPEVFNILLQIL 636
Query: 503 EDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDY-DEKDSSYNRIKSLVT 561
EDGRLTD KG+TVDF+NT++IMTSNVG+S I + + +GF+ +E+++ Y ++K +
Sbjct: 637 EDGRLTDGKGKTVDFRNTIIIMTSNVGASTISR-QKTLGFNTSIEEERETEYEKMKDNIM 695
Query: 562 EELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRER 621
ELK FRPEFLNR+D++IVF QL + ++EI +MLK V +R+K + I+L+ TE +
Sbjct: 696 NELKHSFRPEFLNRIDDIIVFHQLREEHIREIVKLMLKTVSNRVKDQGIKLEFTEEAEKI 755
Query: 622 VVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSD 670
+ +EGY+ +YGARPLRRAI +++ED ++E++L IK+GDSV V+ D
Sbjct: 756 LAKEGYDTNYGARPLRRAITKIVEDKLSEEILKGNIKKGDSVKVNTIED 804
>gi|21282209|ref|NP_645297.1| endopeptidase [Staphylococcus aureus subsp. aureus MW2]
gi|300912852|ref|ZP_07130294.1| clpc ATPase [Staphylococcus aureus subsp. aureus TCH70]
gi|418987425|ref|ZP_13535098.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG1835]
gi|81762804|sp|Q8NXY8.1|CLPC_STAAW RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpC
gi|21203645|dbj|BAB94345.1| endopeptidase [Staphylococcus aureus subsp. aureus MW2]
gi|300885956|gb|EFK81159.1| clpc ATPase [Staphylococcus aureus subsp. aureus TCH70]
gi|377719213|gb|EHT43383.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG1835]
Length = 818
Score = 794 bits (2051), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/653 (58%), Positives = 510/653 (78%), Gaps = 9/653 (1%)
Query: 16 GSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVG 75
S N PTL+ +LT +A++G LDPV+GR +I RV+++L RRTKNNP LIGEPGVG
Sbjct: 154 ASKSNNTPTLDSLARDLTVIAKDGTLDPVIGRDKEITRVIEVLSRRTKNNPVLIGEPGVG 213
Query: 76 KTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDE 135
KTAIAEGLAQ I + +VP+T++ K+V++LDMG +VAGTKYRGEFEERLKK+MEEI+Q+
Sbjct: 214 KTAIAEGLAQAIVNNEVPETLKDKRVMSLDMGTVVAGTKYRGEFEERLKKVMEEIQQAGN 273
Query: 136 IILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERR 195
+ILFIDE+HTL+GAG AEGAIDA+NILKP+LARGELQCIGATTLDEYRK+IEKD ALERR
Sbjct: 274 VILFIDELHTLVGAGGAEGAIDASNILKPALARGELQCIGATTLDEYRKNIEKDAALERR 333
Query: 196 FQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAID 255
FQPV+V EPSV +T+ ILKGLR+RYE HH++ +DEA+ +A +LS +Y+SDRFLPDKAID
Sbjct: 334 FQPVQVDEPSVVDTVAILKGLRDRYEAHHRINISDEAIEAAVKLSNRYVSDRFLPDKAID 393
Query: 256 LIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQI 315
LIDEA S+VRL+ P +E+E+E+ ++ EK+ AV Q+FE A LRD++ L+ Q
Sbjct: 394 LIDEASSKVRLKSHTTPNNLKEIEQEIEKVKNEKDAAVHAQEFENAANLRDKQTKLEKQY 453
Query: 316 SALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLH 375
++ K + + ++E DI +++ WTGIP+ K++ ES++LL +E+TLH
Sbjct: 454 EEAKNEWKNAQNGMSTS------LSEEDIAEVIAGWTGIPLTKINETESEKLLSLEDTLH 507
Query: 376 KRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEE 435
+RVIGQ +AV +IS+A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+ALA FG ++
Sbjct: 508 ERVIGQKDAVNSISKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGDDD 567
Query: 436 AMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVF 495
AMIR+DMSEFME+H VS+L+G+P GYVG+ +GGQLTE VRR+PY+V+LFDEIEKAHPDVF
Sbjct: 568 AMIRVDMSEFMEKHAVSRLVGAPLGYVGHDDGGQLTEKVRRKPYSVILFDEIEKAHPDVF 627
Query: 496 NMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNR 555
N++LQ+L+DG LTD+KGRTVDF+NT++IMTSNVG+ ++ R GF D +D Y
Sbjct: 628 NILLQVLDDGHLTDTKGRTVDFRNTIIIMTSNVGAQELQD-QRFAGFGGSSDGQD--YET 684
Query: 556 IKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVT 615
I+ + +ELK FRPEFLNR+D++IVF +LTK E+KEI +M+ ++ +RL ++I + VT
Sbjct: 685 IRKTMLKELKNSFRPEFLNRVDDIIVFHKLTKEELKEIVTMMVNKLTNRLSEQNINIIVT 744
Query: 616 ERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVD 668
++ ++++ EEGY+P YGARPL RAI + +ED+++E +L EG V VD D
Sbjct: 745 DKAKDKIAEEGYDPEYGARPLIRAIQKTIEDNLSELILDGNQIEGKKVTVDHD 797
>gi|72163275|ref|YP_290932.1| ATPase [Thermobifida fusca YX]
gi|71917007|gb|AAZ56909.1| ATPase [Thermobifida fusca YX]
Length = 830
Score = 794 bits (2051), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 388/670 (57%), Positives = 525/670 (78%), Gaps = 12/670 (1%)
Query: 4 ESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTK 63
+ E AG S+ + L+++G NLT+ A EGKLDPV+GR +IERV+Q+L RRTK
Sbjct: 146 QGKEPQAAGTAAESAPSTSLVLDQFGRNLTQAAREGKLDPVIGRDKEIERVMQVLSRRTK 205
Query: 64 NNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERL 123
NNP L+G+PGVGKTA+ EGLAQ+I G++P+T++ K++ TLD+G LVAG++YRG+FEERL
Sbjct: 206 NNPVLVGDPGVGKTAVVEGLAQKIVKGEIPETLKDKQLYTLDLGALVAGSRYRGDFEERL 265
Query: 124 KKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYR 183
+K+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEYR
Sbjct: 266 RKVLKEIRSRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIGATTLDEYR 325
Query: 184 KHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQY 243
K++EKD ALERRFQP++V EP++ TI+ILKGLR+RYE HH++ TD ALV+AAQL+ +Y
Sbjct: 326 KYLEKDAALERRFQPIQVEEPTISHTIEILKGLRDRYEAHHRVSITDGALVAAAQLADRY 385
Query: 244 ISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGE 303
ISDR+LPDKAIDLIDEAGSR+R+R P + RE ++++ ++ ++K A+ QDFE+A
Sbjct: 386 ISDRYLPDKAIDLIDEAGSRMRIRRMTAPPDLREFDEKIAKVRRDKEAAIDAQDFERAAA 445
Query: 304 LRDREMDLKAQISALVDKGKEMSKAETEAGDVGPV--VTEVDIQHIVSAWTGIPVEKVST 361
LRD E L+AQ + + E +AGD+ V V E I +++ TGIPV +++
Sbjct: 446 LRDEEKRLQAQ--------RAQKEKEWKAGDMDTVAEVNEELIAEVLATATGIPVFRLTE 497
Query: 362 DESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSE 421
+ES RLL+MEE LHKRVIGQD+A+KA+S+AIRR R GLK+P RP SFIF+GP+GVGK+E
Sbjct: 498 EESSRLLRMEEELHKRVIGQDDAIKALSQAIRRTRAGLKDPKRPGGSFIFAGPSGVGKTE 557
Query: 422 LAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTV 481
L KALA + FG E+A+I+LDMSEFME+HTVS+L GSPPGYVGY EGGQLTE VRR+P++V
Sbjct: 558 LCKALAEFLFGDEDALIQLDMSEFMEKHTVSRLFGSPPGYVGYEEGGQLTEKVRRKPFSV 617
Query: 482 VLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIG 541
VLFDEIEKAH D+FN +LQ+LE+GRLTD++GR VDFKNT+++MT+N+G+ I K G+ +G
Sbjct: 618 VLFDEIEKAHGDIFNSLLQVLEEGRLTDAQGRNVDFKNTIIVMTTNLGTRDISK-GQPMG 676
Query: 542 FDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEV 601
F D+ ++Y+R+K+ V EELKQ+FRPEFLNR+D+ IVF QLT+ E+ I D+M+ +
Sbjct: 677 F-ARPDDTQTTYDRMKAKVNEELKQHFRPEFLNRVDDTIVFHQLTQKEITAIVDLMVARL 735
Query: 602 FDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGD 661
+RLK +D+ ++V ++ + E GY+P GARPLRR I R +ED+++EK+L E+K G
Sbjct: 736 DERLKDRDMGIEVRPHAKKILAERGYDPVLGARPLRRTIQREIEDALSEKILYGELKSGQ 795
Query: 662 SVIVDVDSDG 671
VIVD + +G
Sbjct: 796 IVIVDAEGEG 805
>gi|16077154|ref|NP_387967.1| class III stress response-related ATPase [Bacillus subtilis subsp.
subtilis str. 168]
gi|221307897|ref|ZP_03589744.1| class III stress response-related ATPase [Bacillus subtilis subsp.
subtilis str. 168]
gi|221312218|ref|ZP_03594023.1| class III stress response-related ATPase [Bacillus subtilis subsp.
subtilis str. NCIB 3610]
gi|221317152|ref|ZP_03598446.1| class III stress response-related ATPase [Bacillus subtilis subsp.
subtilis str. JH642]
gi|221321415|ref|ZP_03602709.1| class III stress response-related ATPase [Bacillus subtilis subsp.
subtilis str. SMY]
gi|402774329|ref|YP_006628273.1| class III stress response-related ATPase [Bacillus subtilis QB928]
gi|418034764|ref|ZP_12673233.1| class III stress response-related ATPase [Bacillus subtilis subsp.
subtilis str. SC-8]
gi|452916619|ref|ZP_21965241.1| negative regulator of genetic competence ClpC/MecB [Bacillus
subtilis MB73/2]
gi|586900|sp|P37571.1|CLPC_BACSU RecName: Full=Negative regulator of genetic competence ClpC/MecB
gi|442360|gb|AAA19233.1| ClpC adenosine triphosphatase [Bacillus subtilis]
gi|467474|dbj|BAA05320.1| clpA/clpB family [Bacillus subtilis]
gi|2632353|emb|CAB11862.1| class III stress response-related ATPase, AAA+ superfamily
[Bacillus subtilis subsp. subtilis str. 168]
gi|351468418|gb|EHA28638.1| class III stress response-related ATPase [Bacillus subtilis subsp.
subtilis str. SC-8]
gi|402479515|gb|AFQ56024.1| Class III stress response-related ATPase, AAA+superfamily [Bacillus
subtilis QB928]
gi|407955777|dbj|BAM49017.1| class III stress response-related ATPase [Bacillus subtilis
BEST7613]
gi|407963048|dbj|BAM56287.1| class III stress response-related ATPase [Bacillus subtilis
BEST7003]
gi|452114528|gb|EME04928.1| negative regulator of genetic competence ClpC/MecB [Bacillus
subtilis MB73/2]
Length = 810
Score = 794 bits (2051), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 398/667 (59%), Positives = 520/667 (77%), Gaps = 10/667 (1%)
Query: 9 VGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCL 68
G+ G +S PTL+ +LT +A+E LDPV+GR +I+RV+++L RRTKNNP L
Sbjct: 147 TGSSAAGTNSNANTPTLDSLARDLTAIAKEDSLDPVIGRSKEIQRVIEVLSRRTKNNPVL 206
Query: 69 IGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLME 128
IGEPGVGKTAIAEGLAQ+I + +VP+ + K+V+TLDMG +VAGTKYRGEFE+RLKK+M+
Sbjct: 207 IGEPGVGKTAIAEGLAQQIINNEVPEILRDKRVMTLDMGTVVAGTKYRGEFEDRLKKVMD 266
Query: 129 EIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEK 188
EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTLDEYRK+IEK
Sbjct: 267 EIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEYRKYIEK 326
Query: 189 DPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRF 248
D ALERRFQP++V +PSVDE+IQIL+GLR+RYE HH++ TD+A+ +A +LS +YISDRF
Sbjct: 327 DAALERRFQPIQVDQPSVDESIQILQGLRDRYEAHHRVSITDDAIEAAVKLSDRYISDRF 386
Query: 249 LPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDRE 308
LPDKAIDLIDEAGS+VRLR P +ELE++L ++ KEK+ AV+ Q+FEKA LRD E
Sbjct: 387 LPDKAIDLIDEAGSKVRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFEKAASLRDTE 446
Query: 309 MDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLL 368
L+ Q+ KE + G VT DI +VS+WTG+PV K++ E+D+LL
Sbjct: 447 QRLREQVEDTKKSWKE------KQGQENSEVTVDDIAMVVSSWTGVPVSKIAQTETDKLL 500
Query: 369 KMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAA 428
ME LH RVIGQDEAV A+++A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+ALA
Sbjct: 501 NMENILHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAE 560
Query: 429 YYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIE 488
FG EE+MIR+DMSE+ME+H+ S+L+GSPPGYVGY EGGQLTE VRR+PY+VVL DEIE
Sbjct: 561 SIFGDEESMIRIDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPYSVVLLDEIE 620
Query: 489 KAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDE 548
KAHPDVFN++LQ+LEDGRLTDSKGRTVDF+NT+LIMTSNVG+S +++ + +GF++ +
Sbjct: 621 KAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTILIMTSNVGASELKR-NKYVGFNV--QD 677
Query: 549 KDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTK 608
+ ++ +K V ELK+ FRPEF+NR+DE+IVF L K + EI +M ++ RLK +
Sbjct: 678 ETQNHKDMKDKVMGELKRAFRPEFINRIDEIIVFHSLEKKHLTEIVSLMSDQLTKRLKEQ 737
Query: 609 DIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVD 668
D+ +++T+ + +V EEG + YGARPLRRAI + +ED ++E++L I +G +++DV+
Sbjct: 738 DLSIELTDAAKAKVAEEGVDLEYGARPLRRAIQKHVEDRLSEELLRGNIHKGQHIVLDVE 797
Query: 669 SDGNVTV 675
DG V
Sbjct: 798 -DGEFVV 803
>gi|148381451|ref|YP_001255992.1| negative regulator of genetic competence MecB/ClpC [Clostridium
botulinum A str. ATCC 3502]
gi|153932782|ref|YP_001385826.1| negative regulator of genetic competence MecB/ClpC [Clostridium
botulinum A str. ATCC 19397]
gi|153936468|ref|YP_001389233.1| negative regulator of genetic competence MecB/ClpC [Clostridium
botulinum A str. Hall]
gi|387819793|ref|YP_005680140.1| ATP-dependent Clp protease, ATP-binding subunit ClpC / Negative
regulator of genetic competence clcC/mecB [Clostridium
botulinum H04402 065]
gi|148290935|emb|CAL85071.1| negative regulator of genetic competence [Clostridium botulinum A
str. ATCC 3502]
gi|152928826|gb|ABS34326.1| putative negative regulator of genetic competence MecB/ClpC
[Clostridium botulinum A str. ATCC 19397]
gi|152932382|gb|ABS37881.1| putative negative regulator of genetic competence MecB/ClpC
[Clostridium botulinum A str. Hall]
gi|322807837|emb|CBZ05412.1| ATP-dependent Clp protease, ATP-binding subunit ClpC / Negative
regulator of genetic competence clcC/mecB [Clostridium
botulinum H04402 065]
Length = 811
Score = 794 bits (2051), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 388/649 (59%), Positives = 524/649 (80%), Gaps = 8/649 (1%)
Query: 23 PTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEG 82
PTL+++G +LT++AEEGK+DPV+GR + +RV++IL RRTKNNPCLIGEPGVGKTAIAEG
Sbjct: 163 PTLDQFGRDLTEMAEEGKVDPVIGRDKETQRVLEILCRRTKNNPCLIGEPGVGKTAIAEG 222
Query: 83 LAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDE 142
LAQ I G++P+ ++ K+V+TLD+ ++AG KYRGEFE+RLKK+MEE++ S + ILFIDE
Sbjct: 223 LAQNIIDGNIPEILKNKRVVTLDLTSMIAGAKYRGEFEDRLKKIMEEVRSSKDTILFIDE 282
Query: 143 VHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVP 202
+HT++GAGAAEGAIDAANILKP+LARGE+QCIGATTLDEYRK+IEKD ALERRFQP+ V
Sbjct: 283 IHTIVGAGAAEGAIDAANILKPALARGEIQCIGATTLDEYRKYIEKDSALERRFQPINVG 342
Query: 203 EPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGS 262
EP+ +ETI+ILKGLR++YE HH++++TD+A+ +A LS +YI DRFLPDKAIDL+DEAGS
Sbjct: 343 EPTKEETIEILKGLRDKYEAHHRVKFTDDAIYAAVNLSDRYIRDRFLPDKAIDLMDEAGS 402
Query: 263 RVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKG 322
+VR+++ P + + +E++L ++ KEK +A+R QDFEKA LRD+E +LK ++ L
Sbjct: 403 KVRIQNLIAPPDLKNIEEQLDKVVKEKEDAIRVQDFEKAANLRDKEKELKEKLEGLKKDW 462
Query: 323 KEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQD 382
AE E ++ +V+E I +VS WT IPV K++ ES+RLLK+E LH RVIGQ+
Sbjct: 463 ----NAEKEGSNL--IVSEQQIAAVVSNWTNIPVNKLTEKESERLLKLENILHNRVIGQE 516
Query: 383 EAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDM 442
EA+K++SR++RRARVGLK+P RPI SFIF GPTGVGK+EL KALA FG+E MIR+DM
Sbjct: 517 EAIKSVSRSVRRARVGLKDPKRPIGSFIFLGPTGVGKTELTKALAEAMFGNENNMIRVDM 576
Query: 443 SEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQIL 502
SE+ME+H+VS+LIGSPPGYVG+ EGGQLT+ VR PY+VVLFDEIEKAHP+VFN++LQIL
Sbjct: 577 SEYMEKHSVSRLIGSPPGYVGHDEGGQLTDKVRTNPYSVVLFDEIEKAHPEVFNILLQIL 636
Query: 503 EDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDY-DEKDSSYNRIKSLVT 561
EDGRLTD KG+TVDF+NT++IMTSNVG+S I + + +GF+ +E+++ Y ++K +
Sbjct: 637 EDGRLTDGKGKTVDFRNTIIIMTSNVGASTISR-QKTLGFNTSIEEERETEYEKMKDNIM 695
Query: 562 EELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRER 621
ELK FRPEFLNR+D++IVF QL + ++EI +MLK V +R+K + I+L+ TE +
Sbjct: 696 NELKHSFRPEFLNRIDDIIVFHQLREEHIREIVKLMLKTVSNRVKDQGIKLEFTEEAEKI 755
Query: 622 VVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSD 670
+ +EGY+ +YGARPLRRAI +++ED ++E++L IK+GDSV V+ D
Sbjct: 756 LAKEGYDTNYGARPLRRAITKIVEDKLSEEILKGNIKKGDSVKVNTIED 804
>gi|302559271|ref|ZP_07311613.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Streptomyces
griseoflavus Tu4000]
gi|302476889|gb|EFL39982.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Streptomyces
griseoflavus Tu4000]
Length = 841
Score = 794 bits (2051), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/687 (58%), Positives = 528/687 (76%), Gaps = 16/687 (2%)
Query: 11 AGVGGGSSGNKMPTL--EEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCL 68
A GG + G +L +++G NLT+ A E KLDPV+GR+ +IERV+Q+L RRTKNNP L
Sbjct: 151 ATAGGPAEGTPSTSLVLDQFGRNLTQAARESKLDPVIGREKEIERVMQVLSRRTKNNPVL 210
Query: 69 IGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLME 128
IGEPGVGKTA+ EGLAQ I G+VP+T++ K + TLD+G LVAG++YRG+FEERLKK+++
Sbjct: 211 IGEPGVGKTAVVEGLAQAIVKGEVPETLKDKHLYTLDLGALVAGSRYRGDFEERLKKVLK 270
Query: 129 EIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEK 188
EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEYRKH+EK
Sbjct: 271 EIRTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIGATTLDEYRKHLEK 330
Query: 189 DPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRF 248
D ALERRFQP++V EPS+ TI+ILKGLR+RYE HH++ TDEALV AA L+ +YISDRF
Sbjct: 331 DAALERRFQPIQVAEPSLPHTIEILKGLRDRYEAHHRVSITDEALVQAATLADRYISDRF 390
Query: 249 LPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDRE 308
LPDKAIDLIDEAGSR+R+R P + RE ++++ + ++K A+ QDFEKA LRD+E
Sbjct: 391 LPDKAIDLIDEAGSRMRIRRMTAPPDLREFDEKIAGVRRDKESAIDSQDFEKAASLRDKE 450
Query: 309 MDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKVSTDESD 365
L A K + E +AGD+ VV EVD I +++ TGIPV K++ +ES
Sbjct: 451 KQLLA--------AKAKREKEWKAGDM-DVVAEVDGELIAEVLATATGIPVFKLTEEESS 501
Query: 366 RLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKA 425
RLL+ME+ LHKRVIGQ +AVKA+S+AIRR R GLK+P RP SFIF+GP+GVGK+EL+KA
Sbjct: 502 RLLRMEDELHKRVIGQVDAVKALSKAIRRTRAGLKDPKRPGGSFIFAGPSGVGKTELSKA 561
Query: 426 LAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFD 485
LA + FG E+A+I LDMSEF E+HTVS+L GSPPGYVGY EGGQLTE VRR+P++VVLFD
Sbjct: 562 LAEFLFGDEDALISLDMSEFSEKHTVSRLFGSPPGYVGYEEGGQLTEKVRRKPFSVVLFD 621
Query: 486 EIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLD 545
E+EKAHPD+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N+G+ I K G +GF
Sbjct: 622 EVEKAHPDIFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNLGTRDISK-GFNLGFAAA 680
Query: 546 YDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRL 605
D K ++Y R+K+ V +ELKQ+FRPEFLNR+D+++VF QL++ ++ I D+M+ +V +RL
Sbjct: 681 GDTK-TNYERMKNKVQDELKQHFRPEFLNRVDDVVVFPQLSQDDILRIVDLMIDKVDERL 739
Query: 606 KTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIV 665
K +D+ +++++ +E + + GY+P GARPLRR I R +EDS++EK+L E++ G V+V
Sbjct: 740 KDRDMGIELSQSAKELLSKRGYDPVLGARPLRRTIQREIEDSLSEKILFGELRPGHIVVV 799
Query: 666 DVDSDGNVTVLNGSSGAPESLADPLPV 692
D + +G+ +L D P+
Sbjct: 800 DTEGEGDTATFTFRGEEKSALPDVPPI 826
>gi|229188367|ref|ZP_04315415.1| Negative regulator of genetic competence [Bacillus cereus ATCC
10876]
gi|228595041|gb|EEK52812.1| Negative regulator of genetic competence [Bacillus cereus ATCC
10876]
Length = 811
Score = 794 bits (2051), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 398/666 (59%), Positives = 520/666 (78%), Gaps = 9/666 (1%)
Query: 5 STEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKN 64
S EA GG S+ PTL+ +LT +A E +LDPV+GR +I+RV+++L RRTKN
Sbjct: 144 SNEASSGHQGGSSTNANTPTLDSLARDLTVVARENRLDPVIGRSKEIQRVIEVLSRRTKN 203
Query: 65 NPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLK 124
NP LIGEPGVGKTAIAEGLAQ+I + +VP+T+ K+V+TLDMG +VAGTKYRGEFE+RLK
Sbjct: 204 NPVLIGEPGVGKTAIAEGLAQQIVNNEVPETLRDKRVMTLDMGTVVAGTKYRGEFEDRLK 263
Query: 125 KLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRK 184
K+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTLDEYRK
Sbjct: 264 KVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEYRK 323
Query: 185 HIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYI 244
+IEKD ALERRFQP+ V EPS++E+ QILKGLR+RYE HH++ TD+A+ +A +LS +YI
Sbjct: 324 YIEKDAALERRFQPIHVDEPSLEESTQILKGLRDRYEAHHRVSITDDAIDAAVKLSDRYI 383
Query: 245 SDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGEL 304
+DRFLPDKAIDLIDEA S+VRLR P +ELE +L +I KEK+ AV+ Q+FEKA L
Sbjct: 384 TDRFLPDKAIDLIDEAASKVRLRSYTTPPNLKELEVKLEEIRKEKDAAVQSQEFEKAASL 443
Query: 305 RDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDES 364
RD E L+ ++ + KE E VT DI ++VS WT IPV K++ E+
Sbjct: 444 RDMEQRLREKLEDTKRQWKEQQGKENSE------VTVEDIANVVSTWTRIPVSKLAQTET 497
Query: 365 DRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAK 424
D+LL +E LH RVIGQDEAV A+++A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+
Sbjct: 498 DKLLNLESILHDRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELAR 557
Query: 425 ALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLF 484
ALA FG E+AMIR+DMSE+ME+H+ S+L+GSPPGYVGY EGGQLTE VRR+PY+VVL
Sbjct: 558 ALAESMFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPYSVVLL 617
Query: 485 DEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDL 544
DE+EKAHPDVFN++LQ+LEDGRLTDSKGRTVDF+NT++IMTSNVG+ +++ + +GF++
Sbjct: 618 DEVEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTIVIMTSNVGAEALKR-NKHLGFNV 676
Query: 545 DYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDR 604
+ +D Y+ +K V +ELK+ FRPEFLNR+DE+IVF L K ++EI +M+ ++ +R
Sbjct: 677 QDESRD--YSDMKGKVMDELKKAFRPEFLNRIDEIIVFHMLEKKHIQEIVTLMVNQLVNR 734
Query: 605 LKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVI 664
LK ++IELQ+TE + ++G++ YGARPLRRAI + +ED ++E++L I++G VI
Sbjct: 735 LKEQEIELQLTEGAITAIADKGFDREYGARPLRRAIQKHVEDRLSEELLKGAIEKGQKVI 794
Query: 665 VDVDSD 670
DV+ +
Sbjct: 795 FDVEGE 800
>gi|168178801|ref|ZP_02613465.1| negative regulator of genetic competence MecB/ClpC [Clostridium
botulinum NCTC 2916]
gi|182670016|gb|EDT81992.1| negative regulator of genetic competence MecB/ClpC [Clostridium
botulinum NCTC 2916]
Length = 811
Score = 794 bits (2051), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 388/649 (59%), Positives = 524/649 (80%), Gaps = 8/649 (1%)
Query: 23 PTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEG 82
PTL+++G +LT++AEEGK+DPV+GR + +RV++IL RRTKNNPCLIGEPGVGKTAIAEG
Sbjct: 163 PTLDQFGRDLTEMAEEGKVDPVIGRDKETQRVLEILCRRTKNNPCLIGEPGVGKTAIAEG 222
Query: 83 LAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDE 142
LAQ I G++P+ ++ K+V+TLD+ ++AG KYRGEFE+RLKK+MEE++ S + ILFIDE
Sbjct: 223 LAQNIIDGNIPEILKNKRVVTLDLTSMIAGAKYRGEFEDRLKKIMEEVRSSKDTILFIDE 282
Query: 143 VHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVP 202
+HT++GAGAAEGAIDAANILKP+LARGE+QCIGATTLDEYRK+IEKD ALERRFQP+ V
Sbjct: 283 IHTIVGAGAAEGAIDAANILKPALARGEIQCIGATTLDEYRKYIEKDSALERRFQPINVG 342
Query: 203 EPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGS 262
EP+ +ETI+ILKGLR++YE HH++++TD+A+ +A LS +YI DRFLPDKAIDL+DEAGS
Sbjct: 343 EPTKEETIEILKGLRDKYEAHHRVKFTDDAIYAAVNLSDRYIRDRFLPDKAIDLMDEAGS 402
Query: 263 RVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKG 322
+VR+++ P + + +E++L ++ KEK +A+R QDFEKA LRD+E +LK ++ L
Sbjct: 403 KVRIQNLIAPPDLKNIEEQLDKVVKEKEDAIRVQDFEKAANLRDKEKELKEKLEGLKKDW 462
Query: 323 KEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQD 382
AE E ++ +V+E I +VS WT IPV K++ ES+RLLK+E LH RVIGQ+
Sbjct: 463 ----NAEKEGSNL--IVSEQQIAAVVSNWTNIPVNKLTEKESERLLKLENILHNRVIGQE 516
Query: 383 EAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDM 442
EA+K++SR++RRARVGLK+P RPI SFIF GPTGVGK+EL KALA FG+E MIR+DM
Sbjct: 517 EAIKSVSRSVRRARVGLKDPKRPIGSFIFLGPTGVGKTELTKALAEAMFGNENNMIRVDM 576
Query: 443 SEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQIL 502
SE+ME+H+VS+LIGSPPGYVG+ EGGQLT+ VR PY+VVLFDEIEKAHP+VFN++LQIL
Sbjct: 577 SEYMEKHSVSRLIGSPPGYVGHDEGGQLTDKVRTNPYSVVLFDEIEKAHPEVFNILLQIL 636
Query: 503 EDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDY-DEKDSSYNRIKSLVT 561
EDGRLTD KG+TVDF+NT++IMTSNVG+S I + + +GF+ +E+++ Y ++K +
Sbjct: 637 EDGRLTDGKGKTVDFRNTIIIMTSNVGASTISR-QKTLGFNTSIEEERETEYEKMKDNIM 695
Query: 562 EELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRER 621
ELK FRPEFLNR+D++IVF QL + ++EI +MLK V +R+K + I+L+ TE +
Sbjct: 696 NELKHSFRPEFLNRIDDIIVFHQLREEHIREIVKLMLKTVSNRVKDQGIKLEFTEEAEKI 755
Query: 622 VVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSD 670
+ +EGY+ +YGARPLRRAI +++ED ++E++L IK+GDSV V+ D
Sbjct: 756 LAKEGYDTNYGARPLRRAITKIVEDKLSEEILKGNIKKGDSVKVNTIED 804
>gi|228995472|ref|ZP_04155141.1| Negative regulator of genetic competence [Bacillus mycoides
Rock3-17]
gi|229003095|ref|ZP_04160946.1| Negative regulator of genetic competence [Bacillus mycoides
Rock1-4]
gi|228758155|gb|EEM07349.1| Negative regulator of genetic competence [Bacillus mycoides
Rock1-4]
gi|228764276|gb|EEM13154.1| Negative regulator of genetic competence [Bacillus mycoides
Rock3-17]
Length = 811
Score = 794 bits (2051), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/669 (59%), Positives = 523/669 (78%), Gaps = 9/669 (1%)
Query: 5 STEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKN 64
S EA GG S+ PTL+ +LT +A EG+LDPV+GR +I+RV+++L RRTKN
Sbjct: 144 SNEATSGHQGGASANANTPTLDSLARDLTVVAREGRLDPVIGRSKEIQRVIEVLSRRTKN 203
Query: 65 NPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLK 124
NP LIGEPGVGKTAIAEGLAQ+I + +VP+T+ K+V+TLDMG +VAGTKYRGEFE+RLK
Sbjct: 204 NPVLIGEPGVGKTAIAEGLAQQIVNNEVPETLRDKRVMTLDMGTVVAGTKYRGEFEDRLK 263
Query: 125 KLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRK 184
K+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTLDEYRK
Sbjct: 264 KVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEYRK 323
Query: 185 HIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYI 244
+IEKD ALERRFQP+ V EPS++E+IQIL+GLR+RYE HH++ TD+A+ +A +LS +YI
Sbjct: 324 YIEKDAALERRFQPIHVDEPSLEESIQILRGLRDRYEAHHRVSITDDAIEAAVKLSDRYI 383
Query: 245 SDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGEL 304
+DRFLPDKAIDLIDEA S+VRLR P + +ELE +L +I KEK+ AV+ Q+FEKA L
Sbjct: 384 TDRFLPDKAIDLIDEAASKVRLRSYTTPPDLKELEVKLEEIRKEKDAAVQSQEFEKAASL 443
Query: 305 RDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDES 364
RD E L+ ++ + KE E VT DI ++VS WT IPV K++ E+
Sbjct: 444 RDMEQRLREKLEDTKRQWKEQQGKENSE------VTVEDIANVVSTWTRIPVSKLAQTET 497
Query: 365 DRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAK 424
++LL +E LH RVIGQDEAV A+++A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+
Sbjct: 498 NKLLNLESILHDRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELAR 557
Query: 425 ALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLF 484
ALA FG E+AMIR+DMSE+ME+H+ S+L+GSPPGYVGY EGGQLTE VRR+PY+VVL
Sbjct: 558 ALAESMFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPYSVVLL 617
Query: 485 DEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDL 544
DE+EKAHPDVFN++LQ+LEDGRLTDSKGRTVDF+NT++IMTSNVG+ +++ + +GF++
Sbjct: 618 DEVEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTIVIMTSNVGAEALKR-NKHLGFNV 676
Query: 545 DYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDR 604
+ +D Y+ +K V +ELK+ FRPEFLNR+DE+IVF L K ++EI +M+ ++ +R
Sbjct: 677 QDESRD--YSDMKGKVMDELKKAFRPEFLNRIDEIIVFHMLEKKHIQEIVTLMVNQLVNR 734
Query: 605 LKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVI 664
LK ++IEL++T E + ++G++ YGARPLRRAI + +ED ++E++L I++G V+
Sbjct: 735 LKEQEIELELTSTAIESIADKGFDREYGARPLRRAIQKHVEDRLSEELLKGAIEKGQKVV 794
Query: 665 VDVDSDGNV 673
D + + V
Sbjct: 795 FDAEGESFV 803
>gi|311070733|ref|YP_003975656.1| ClpC protein [Bacillus atrophaeus 1942]
gi|419823202|ref|ZP_14346762.1| ClpC protein [Bacillus atrophaeus C89]
gi|310871250|gb|ADP34725.1| ClpC [Bacillus atrophaeus 1942]
gi|388472733|gb|EIM09496.1| ClpC protein [Bacillus atrophaeus C89]
Length = 812
Score = 794 bits (2051), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/667 (59%), Positives = 520/667 (77%), Gaps = 10/667 (1%)
Query: 9 VGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCL 68
G+ G +S PTL+ +LT +A+E LDPV+GR +I+RV+++L RRTKNNP L
Sbjct: 147 TGSSASGTNSNANTPTLDSLARDLTAIAKEDSLDPVIGRSKEIQRVIEVLSRRTKNNPVL 206
Query: 69 IGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLME 128
IGEPGVGKTAIAEGLAQ+I + +VP+ + K+V+TLDMG +VAGTKYRGEFE+RLKK+M+
Sbjct: 207 IGEPGVGKTAIAEGLAQQIINNEVPEILRDKRVMTLDMGTVVAGTKYRGEFEDRLKKVMD 266
Query: 129 EIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEK 188
EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTLDEYRK+IEK
Sbjct: 267 EIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEYRKYIEK 326
Query: 189 DPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRF 248
D ALERRFQP++V +PSVDE++QIL+GLR+RYE HH++ TDEA+ +A +LS +YISDRF
Sbjct: 327 DAALERRFQPIQVDQPSVDESVQILRGLRDRYEAHHRVSITDEAIEAAVKLSDRYISDRF 386
Query: 249 LPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDRE 308
LPDKAIDLIDEAGS+VRLR P +ELE++L ++ KEK+ AV+ Q+FEKA LRD E
Sbjct: 387 LPDKAIDLIDEAGSKVRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFEKAASLRDTE 446
Query: 309 MDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLL 368
L+ Q+ KE + G V+ DI +VS+WTG+PV K++ E+D+LL
Sbjct: 447 QRLREQVEDTKKTWKE------KQGQENSEVSVEDIAMVVSSWTGVPVSKIAQTETDKLL 500
Query: 369 KMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAA 428
ME LH RVIGQDEAV A+++A+RRAR GLK+P RPI SF+F GPTGVGK+ELA+ALA
Sbjct: 501 NMENLLHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFVFLGPTGVGKTELARALAE 560
Query: 429 YYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIE 488
FG EEAMIR+DMSE+ME+H+ S+L+GSPPGYVGY EGGQLTE VRR+PY+VVL DEIE
Sbjct: 561 SIFGDEEAMIRIDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPYSVVLLDEIE 620
Query: 489 KAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDE 548
KAHPDVFN++LQ+LEDGRLTDSKGRTVDF+NT+LIMTSNVG+S +++ + +GF++ +
Sbjct: 621 KAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTILIMTSNVGASELKR-NKYVGFNV--QD 677
Query: 549 KDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTK 608
+ ++ +K V ELK+ FRPEF+NR+DE+IVF L K + EI +M ++ RLK +
Sbjct: 678 ETQNHKDMKDKVMGELKRAFRPEFINRIDEIIVFHSLEKKHLNEIVTLMSDQLTKRLKEQ 737
Query: 609 DIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVD 668
D+ +++TE + +V +EG + YGARPLRRAI + +ED ++E++L I +G +++DV+
Sbjct: 738 DLSIELTEAAKAKVADEGVDLEYGARPLRRAIQKHVEDRLSEELLRGNIDKGQHIVLDVE 797
Query: 669 SDGNVTV 675
DG V
Sbjct: 798 -DGEFVV 803
>gi|218233784|ref|YP_002364931.1| negative regulator of genetic competence ClpC/MecB [Bacillus cereus
B4264]
gi|228919032|ref|ZP_04082411.1| Negative regulator of genetic competence [Bacillus thuringiensis
serovar huazhongensis BGSC 4BD1]
gi|229176682|ref|ZP_04304086.1| Negative regulator of genetic competence [Bacillus cereus 172560W]
gi|365164056|ref|ZP_09360142.1| chaperone ClpB [Bacillus sp. 7_6_55CFAA_CT2]
gi|423416018|ref|ZP_17393138.1| chaperone ClpB [Bacillus cereus BAG3O-2]
gi|423428188|ref|ZP_17405192.1| chaperone ClpB [Bacillus cereus BAG4O-1]
gi|423578489|ref|ZP_17554600.1| chaperone ClpB [Bacillus cereus VD014]
gi|423590631|ref|ZP_17566693.1| chaperone ClpB [Bacillus cereus VD045]
gi|218161741|gb|ACK61733.1| negative regulator of genetic competence ClpC/MecB [Bacillus cereus
B4264]
gi|228606725|gb|EEK64142.1| Negative regulator of genetic competence [Bacillus cereus 172560W]
gi|228840557|gb|EEM85819.1| Negative regulator of genetic competence [Bacillus thuringiensis
serovar huazhongensis BGSC 4BD1]
gi|363613357|gb|EHL64874.1| chaperone ClpB [Bacillus sp. 7_6_55CFAA_CT2]
gi|401094465|gb|EJQ02546.1| chaperone ClpB [Bacillus cereus BAG3O-2]
gi|401127110|gb|EJQ34839.1| chaperone ClpB [Bacillus cereus BAG4O-1]
gi|401220268|gb|EJR26910.1| chaperone ClpB [Bacillus cereus VD045]
gi|401221214|gb|EJR27838.1| chaperone ClpB [Bacillus cereus VD014]
Length = 811
Score = 794 bits (2051), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 398/666 (59%), Positives = 520/666 (78%), Gaps = 9/666 (1%)
Query: 5 STEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKN 64
S EA GG S+ PTL+ +LT +A E +LDPV+GR +I+RV+++L RRTKN
Sbjct: 144 SNEASSGHQGGSSTNANTPTLDSLARDLTVVARENRLDPVIGRSKEIQRVIEVLSRRTKN 203
Query: 65 NPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLK 124
NP LIGEPGVGKTAIAEGLAQ+I + +VP+T+ K+V+TLDMG +VAGTKYRGEFE+RLK
Sbjct: 204 NPVLIGEPGVGKTAIAEGLAQQIVNNEVPETLRDKRVMTLDMGTVVAGTKYRGEFEDRLK 263
Query: 125 KLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRK 184
K+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTLDEYRK
Sbjct: 264 KVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEYRK 323
Query: 185 HIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYI 244
+IEKD ALERRFQP+ V EPS++E+ QILKGLR+RYE HH++ TD+A+ +A +LS +YI
Sbjct: 324 YIEKDAALERRFQPIHVDEPSLEESTQILKGLRDRYEAHHRVSITDDAIDAAVKLSDRYI 383
Query: 245 SDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGEL 304
+DRFLPDKAIDLIDEA S+VRLR P +ELE +L +I KEK+ AV+ Q+FEKA L
Sbjct: 384 TDRFLPDKAIDLIDEAASKVRLRSYTTPPNLKELEVKLEEIRKEKDAAVQSQEFEKAASL 443
Query: 305 RDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDES 364
RD E L+ ++ + KE E VT DI ++VS WT IPV K++ E+
Sbjct: 444 RDMEQRLREKLEDTKRQWKEQQGKENSE------VTVEDIANVVSTWTRIPVSKLAQTET 497
Query: 365 DRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAK 424
D+LL +E LH RVIGQDEAV A+++A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+
Sbjct: 498 DKLLNLESILHDRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELAR 557
Query: 425 ALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLF 484
ALA FG E+AMIR+DMSE+ME+H+ S+L+GSPPGYVGY EGGQLTE VRR+PY+VVL
Sbjct: 558 ALAESMFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPYSVVLL 617
Query: 485 DEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDL 544
DE+EKAHPDVFN++LQ+LEDGRLTDSKGRTVDF+NT++IMTSNVG+ +++ + +GF++
Sbjct: 618 DEVEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTIVIMTSNVGAEALKR-NKHLGFNV 676
Query: 545 DYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDR 604
+ +D Y+ +K V +ELK+ FRPEFLNR+DE+IVF L K ++EI +M+ ++ +R
Sbjct: 677 QDESRD--YSDMKGKVMDELKKAFRPEFLNRIDEIIVFHMLEKKHIQEIVTLMVNQLVNR 734
Query: 605 LKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVI 664
LK ++IELQ+TE + ++G++ YGARPLRRAI + +ED ++E++L I++G VI
Sbjct: 735 LKEQEIELQLTEGAIAAIADKGFDREYGARPLRRAIQKHVEDRLSEELLKGAIEKGQKVI 794
Query: 665 VDVDSD 670
DV+ +
Sbjct: 795 FDVEGE 800
>gi|421733018|ref|ZP_16172133.1| class III stress response-related ATPase, AAA+ superfamily protein
[Bacillus amyloliquefaciens subsp. plantarum M27]
gi|407073059|gb|EKE46057.1| class III stress response-related ATPase, AAA+ superfamily protein
[Bacillus amyloliquefaciens subsp. plantarum M27]
Length = 811
Score = 794 bits (2051), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/669 (59%), Positives = 519/669 (77%), Gaps = 14/669 (2%)
Query: 9 VGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCL 68
G+ G +S PTL+ +LT +A+E LDPV+GR +I+RV+++L RRTKNNP L
Sbjct: 148 TGSSASGANSNANTPTLDSLARDLTAIAKEDSLDPVIGRSKEIQRVIEVLSRRTKNNPVL 207
Query: 69 IGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLME 128
IGEPGVGKTAIAEGLAQ+I + +VP+ + K+V+TLDMG +VAGTKYRGEFE+RLKK+M+
Sbjct: 208 IGEPGVGKTAIAEGLAQQIINNEVPEILRDKRVMTLDMGTVVAGTKYRGEFEDRLKKVMD 267
Query: 129 EIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEK 188
EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTLDEYRK+IEK
Sbjct: 268 EIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEYRKYIEK 327
Query: 189 DPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRF 248
D ALERRFQP++V +PS DE+IQILKGLR+RYE HH++ TDEA+ +A +LS +YISDRF
Sbjct: 328 DAALERRFQPIQVDQPSADESIQILKGLRDRYEAHHRVSITDEAIEAAVKLSDRYISDRF 387
Query: 249 LPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDRE 308
LPDKAIDLIDEAGS+VRLR P +ELE++L ++ KEK+ AV+ Q+FEKA LRD E
Sbjct: 388 LPDKAIDLIDEAGSKVRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFEKAASLRDTE 447
Query: 309 MDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLL 368
L+ Q+ KE + G V+ DI +VS+WTG+PV K++ E+D+LL
Sbjct: 448 QRLREQVEDTKKTWKE------KQGQENSEVSVEDIAMVVSSWTGVPVSKIAQTETDKLL 501
Query: 369 KMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAA 428
ME LH RVIGQDEAV A+++A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+ALA
Sbjct: 502 NMESILHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAE 561
Query: 429 YYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIE 488
FG EEAMIR+DMSE+ME+H+ S+L+GSPPGYVGY EGGQLTE VRR+PY+VVL DEIE
Sbjct: 562 SIFGDEEAMIRVDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPYSVVLLDEIE 621
Query: 489 KAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDE 548
KAHPDVFN++LQ+LEDGRLTDSKGRTVDF+NT+LIMTSNVG+S +++ + +GF++
Sbjct: 622 KAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTILIMTSNVGASELKR-NKYVGFNV---- 676
Query: 549 KDSSYNR--IKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLK 606
+D S N +K V ELK+ FRPEF+NR+DE+IVF L K + +I +M ++ RLK
Sbjct: 677 QDESQNHKDMKDKVMGELKRAFRPEFINRIDEIIVFHSLEKKHLTDIVSLMSDQLTKRLK 736
Query: 607 TKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVD 666
+D+ +++T+ + +V EEG + YGARPLRRAI + +ED ++E++L I +G +++D
Sbjct: 737 EQDLSIELTDAAKAKVAEEGVDLEYGARPLRRAIQKHVEDRLSEELLRGNIDKGQHIVLD 796
Query: 667 VDSDGNVTV 675
V+ DG V
Sbjct: 797 VE-DGEFVV 804
>gi|384177987|ref|YP_005563749.1| negative regulator of genetic competence clpC/mecB [Bacillus
thuringiensis serovar finitimus YBT-020]
gi|324324071|gb|ADY19331.1| negative regulator of genetic competence clpC/mecB [Bacillus
thuringiensis serovar finitimus YBT-020]
Length = 811
Score = 794 bits (2051), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/669 (59%), Positives = 521/669 (77%), Gaps = 9/669 (1%)
Query: 5 STEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKN 64
S EA GG S+ PTL+ +LT +A E +LDPV+GR +I+RV+++L RRTKN
Sbjct: 144 SNEASSGHQGGSSTNANTPTLDSLARDLTVVARENRLDPVIGRGKEIQRVIEVLSRRTKN 203
Query: 65 NPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLK 124
NP LIGEPGVGKTAIAEGLAQ+I + +VP+T+ K+V+TLDMG +VAGTKYRGEFE+RLK
Sbjct: 204 NPVLIGEPGVGKTAIAEGLAQQIVNNEVPETLRDKRVMTLDMGTVVAGTKYRGEFEDRLK 263
Query: 125 KLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRK 184
K+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTLDEYRK
Sbjct: 264 KVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEYRK 323
Query: 185 HIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYI 244
+IEKD ALERRFQP+ V EPS+DE+ QILKGLR+RYE HH++ TD+A+ +A +LS +YI
Sbjct: 324 YIEKDAALERRFQPIHVDEPSLDESTQILKGLRDRYEAHHRVSITDDAIDAAVKLSDRYI 383
Query: 245 SDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGEL 304
+DRFLPDKAIDLIDEA S+VRLR P +ELE +L +I KEK+ AV+ Q+FEKA L
Sbjct: 384 TDRFLPDKAIDLIDEAASKVRLRSYTTPPNLKELEVKLEEIRKEKDAAVQSQEFEKAASL 443
Query: 305 RDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDES 364
RD E L+ ++ + KE E VT DI ++VS WT IPV K++ E+
Sbjct: 444 RDMEQRLREKLEDTKRQWKEQQGKENSE------VTVEDIANVVSTWTRIPVSKLAQTET 497
Query: 365 DRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAK 424
D+LL +E LH RVIGQDEAV A+++A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+
Sbjct: 498 DKLLNLESILHDRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELAR 557
Query: 425 ALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLF 484
ALA FG E+AMIR+DMSE+ME+H+ S+L+GSPPGYVGY EGGQLTE VRR+PY+VVL
Sbjct: 558 ALAESMFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPYSVVLL 617
Query: 485 DEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDL 544
DE+EKAHPDVFN++LQ+LEDGRLTDSKGRTVDF+NT++IMTSNVG+ +++ + +GF++
Sbjct: 618 DEVEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTIVIMTSNVGAEALKR-NKHLGFNV 676
Query: 545 DYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDR 604
+ +D Y+ +K V +ELK+ FRPEFLNR+DE+IVF L K ++EI +M+ ++ +R
Sbjct: 677 QDEGRD--YSDMKGKVMDELKKAFRPEFLNRIDEIIVFHMLEKKHIQEIVTLMVNQLVNR 734
Query: 605 LKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVI 664
LK ++IELQ+TE + ++G++ YGARPLRRAI + +ED ++E++L I++G VI
Sbjct: 735 LKEQEIELQLTEGAISAIADKGFDREYGARPLRRAIQKHVEDRLSEELLKGAIEKGQKVI 794
Query: 665 VDVDSDGNV 673
DV+ + V
Sbjct: 795 FDVEGESFV 803
>gi|229159255|ref|ZP_04287279.1| Negative regulator of genetic competence [Bacillus cereus R309803]
gi|228624147|gb|EEK80949.1| Negative regulator of genetic competence [Bacillus cereus R309803]
Length = 811
Score = 794 bits (2050), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 398/666 (59%), Positives = 520/666 (78%), Gaps = 9/666 (1%)
Query: 5 STEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKN 64
S EA GG S+ PTL+ +LT +A E +LDPV+GR +I+RV+++L RRTKN
Sbjct: 144 SNEASSGHQGGSSTNANTPTLDSLARDLTVVARENRLDPVIGRGKEIQRVIEVLSRRTKN 203
Query: 65 NPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLK 124
NP LIGEPGVGKTAIAEGLAQ+I + +VP+T+ K+V+TLDMG +VAGTKYRGEFE+RLK
Sbjct: 204 NPVLIGEPGVGKTAIAEGLAQQIVNNEVPETLRDKRVMTLDMGTVVAGTKYRGEFEDRLK 263
Query: 125 KLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRK 184
K+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTLDEYRK
Sbjct: 264 KVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEYRK 323
Query: 185 HIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYI 244
+IEKD ALERRFQP+ V EPS+DE+ QILKGLR+RYE HH++ TD+A+ +A +LS +YI
Sbjct: 324 YIEKDAALERRFQPIHVDEPSLDESTQILKGLRDRYEAHHRVSITDDAIDAAVKLSDRYI 383
Query: 245 SDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGEL 304
+DRFLPDKAIDLIDEA S+VRLR P +ELE +L +I KEK+ AV+ Q+FEKA L
Sbjct: 384 TDRFLPDKAIDLIDEAASKVRLRSYTTPPNLKELEVKLEEIRKEKDAAVQSQEFEKAASL 443
Query: 305 RDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDES 364
RD E L+ ++ + KE E VT DI ++VS WT IPV K++ E+
Sbjct: 444 RDMEQRLREKLEDTKRQWKEQQGKENSE------VTVEDIANVVSTWTRIPVSKLAQTET 497
Query: 365 DRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAK 424
D+LL +E LH RVIGQDEAV A+++A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+
Sbjct: 498 DKLLNLESILHDRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELAR 557
Query: 425 ALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLF 484
ALA FG E+AMIR+DMSE+ME+H+ S+L+GSPPGYVGY EGGQLTE VRR+PY+VVL
Sbjct: 558 ALAESMFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPYSVVLL 617
Query: 485 DEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDL 544
DE+EKAHPDVFN++LQ+LEDGRLTDSKGRTVDF+NT++IMTSNVG+ +++ + +GF++
Sbjct: 618 DEVEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTIVIMTSNVGAEALKR-NKHLGFNV 676
Query: 545 DYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDR 604
+ +D Y+ +K V +ELK+ FRPEFLNR+DE+IVF L K ++EI ++M+ ++ +R
Sbjct: 677 QDESRD--YSDMKGKVMDELKKAFRPEFLNRIDEIIVFHMLEKKHIQEIVNLMVNQLVNR 734
Query: 605 LKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVI 664
LK ++IEL +TE + ++G++ YGARPLRRAI + +ED ++E++L I++G VI
Sbjct: 735 LKEQEIELHLTEGAISAIADKGFDREYGARPLRRAIQKHVEDRLSEELLKGAIEKGQKVI 794
Query: 665 VDVDSD 670
DV+ +
Sbjct: 795 FDVEGE 800
>gi|153940994|ref|YP_001392864.1| negative regulator of genetic competence MecB/ClpC [Clostridium
botulinum F str. Langeland]
gi|384463825|ref|YP_005676420.1| negative regulator of genetic competence MecB/ClpC [Clostridium
botulinum F str. 230613]
gi|152936890|gb|ABS42388.1| negative regulator of genetic competence MecB/ClpC [Clostridium
botulinum F str. Langeland]
gi|295320842|gb|ADG01220.1| negative regulator of genetic competence MecB/ClpC [Clostridium
botulinum F str. 230613]
Length = 811
Score = 794 bits (2050), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/649 (59%), Positives = 524/649 (80%), Gaps = 8/649 (1%)
Query: 23 PTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEG 82
PTL+++G +LT++AEEGK+DPV+GR + +RV++IL RRTKNNPCLIGEPGVGKTAIAEG
Sbjct: 163 PTLDQFGRDLTEMAEEGKVDPVIGRDKETQRVLEILCRRTKNNPCLIGEPGVGKTAIAEG 222
Query: 83 LAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDE 142
LAQ I G++P+ ++ K+V+TLD+ ++AG KYRGEFE+RLKK+MEE++ S + ILFIDE
Sbjct: 223 LAQNIIDGNIPEILKNKRVVTLDLTSMIAGAKYRGEFEDRLKKIMEEVRSSKDTILFIDE 282
Query: 143 VHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVP 202
+HT++GAGAAEGAIDAANILKP+LARGE+QCIGATTLDEYRK+IEKD ALERRFQP+ V
Sbjct: 283 IHTIVGAGAAEGAIDAANILKPALARGEIQCIGATTLDEYRKYIEKDSALERRFQPINVG 342
Query: 203 EPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGS 262
EP+ +ETI+ILKGLR++YE HH++++TD+A+ +A LS +YI DRFLPDKAIDL+DEAGS
Sbjct: 343 EPTKEETIEILKGLRDKYEAHHRVKFTDDAIYAAVNLSDRYIRDRFLPDKAIDLMDEAGS 402
Query: 263 RVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKG 322
+VR+++ P + + +E++L ++ KEK +A+R QDFEKA LRD+E +LK ++ L
Sbjct: 403 KVRIQNLIAPPDLKNIEEQLDKVVKEKEDAIRVQDFEKAANLRDKEKELKEKLEGLKKDW 462
Query: 323 KEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQD 382
AE E ++ +V+E I +VS WT IPV K++ ES+RLLK+E LH RVIGQ+
Sbjct: 463 ----NAEKEGSNL--IVSEQQIAAVVSNWTNIPVNKLTEKESERLLKLENILHNRVIGQE 516
Query: 383 EAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDM 442
EA+K++SR++RRARVGLK+P RPI SFIF GPTGVGK+EL KALA FG+E MIR+DM
Sbjct: 517 EAIKSVSRSVRRARVGLKDPKRPIGSFIFLGPTGVGKTELTKALAEAMFGNENNMIRVDM 576
Query: 443 SEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQIL 502
SE+ME+H+VS+LIGSPPGY+G+ EGGQLT+ VR PY+VVLFDEIEKAHP+VFN++LQIL
Sbjct: 577 SEYMEKHSVSRLIGSPPGYIGHDEGGQLTDKVRTNPYSVVLFDEIEKAHPEVFNILLQIL 636
Query: 503 EDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDY-DEKDSSYNRIKSLVT 561
EDGRLTD KG+TVDF+NT++IMTSNVG+S I + + +GF+ +E+++ Y ++K +
Sbjct: 637 EDGRLTDGKGKTVDFRNTIIIMTSNVGASTISR-QKTLGFNTSIEEERETEYEKMKDNIM 695
Query: 562 EELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRER 621
ELK FRPEFLNR+D++IVF QL + ++EI +MLK V +R+K + I+L+ TE +
Sbjct: 696 NELKHSFRPEFLNRIDDIIVFHQLREEHIREIVKLMLKTVSNRVKDQGIKLEFTEEAEKI 755
Query: 622 VVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSD 670
+ +EGY+ +YGARPLRRAI +++ED ++E++L IK+GDSV V+ D
Sbjct: 756 LAKEGYDTNYGARPLRRAITKIVEDKLSEEILKGNIKKGDSVKVNTIED 804
>gi|398783815|ref|ZP_10547185.1| ATPase AAA [Streptomyces auratus AGR0001]
gi|396995722|gb|EJJ06732.1| ATPase AAA [Streptomyces auratus AGR0001]
Length = 841
Score = 794 bits (2050), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/688 (57%), Positives = 524/688 (76%), Gaps = 16/688 (2%)
Query: 10 GAGVGGGSSGNKMPTL--EEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPC 67
A GG + G +L +++G NLT+ A E KLDPV+GR+ +IERV+Q+L RRTKNNP
Sbjct: 150 AATAGGPAEGTPSTSLVLDQFGRNLTQAARETKLDPVIGREKEIERVMQVLSRRTKNNPV 209
Query: 68 LIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLM 127
LIGEPGVGKTA+ EGLAQ I G+VP+T++ K + TLD+G LVAG++YRG+FEERLKK++
Sbjct: 210 LIGEPGVGKTAVVEGLAQAIVKGEVPETLKDKHLYTLDLGALVAGSRYRGDFEERLKKVL 269
Query: 128 EEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIE 187
+EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEYRKH+E
Sbjct: 270 KEIRTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIGATTLDEYRKHLE 329
Query: 188 KDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDR 247
KD ALERRFQP++V EPS+ TI+ILKGLR+RYE HH++ TD ALV+AA L+ +YISDR
Sbjct: 330 KDAALERRFQPIQVAEPSLPHTIEILKGLRDRYEAHHRVSITDSALVAAATLADRYISDR 389
Query: 248 FLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDR 307
FLPDKAIDLIDEAGSR+R+R P + RE ++++ + +EK A+ QDFE A LRD+
Sbjct: 390 FLPDKAIDLIDEAGSRMRIRRMTAPPDLREFDEKIADVRREKESAIDSQDFEMAAGLRDK 449
Query: 308 EMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKVSTDES 364
E L A K + E +AGD+ VV EVD I +++ TGIPV K++ +ES
Sbjct: 450 EKQLLA--------AKAKREKEWKAGDM-DVVAEVDEELIAEVLATATGIPVFKLTEEES 500
Query: 365 DRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAK 424
RLL+ME+ LHKRVIGQ +A+KA+S+AIRR R GLK+P RP SFIF+GP+GVGK+EL+K
Sbjct: 501 SRLLRMEDELHKRVIGQKDAIKALSQAIRRTRAGLKDPKRPGGSFIFAGPSGVGKTELSK 560
Query: 425 ALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLF 484
LA + FG E+A+I LDMSEF E+HTVS+L GSPPGYVGY EGGQLTE VRR+P++VVLF
Sbjct: 561 TLAEFLFGDEDALISLDMSEFSEKHTVSRLFGSPPGYVGYEEGGQLTEKVRRKPFSVVLF 620
Query: 485 DEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDL 544
DE+EKAHPD+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N+G+ I K G +GF
Sbjct: 621 DEVEKAHPDIFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNLGTRDISK-GFNLGFAA 679
Query: 545 DYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDR 604
D K SSY R+K+ V EELKQ+FRPEFLNR+D+ +VF QLT+ ++ +I D+M+ +V +R
Sbjct: 680 QGDTK-SSYERMKNKVNEELKQHFRPEFLNRVDDTVVFHQLTEDDIIQIVDLMIAKVDER 738
Query: 605 LKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVI 664
LK +D+ ++++ + + + GY+P GARPLRR I R +ED+++EK+L E++ G V+
Sbjct: 739 LKDRDMGIELSGEAKSLLAKRGYDPVLGARPLRRTIQREIEDALSEKILFSELRPGHIVV 798
Query: 665 VDVDSDGNVTVLNGSSGAPESLADPLPV 692
VDV+ +G +L D P+
Sbjct: 799 VDVEGEGETAKFTFRGEEKSALPDAPPI 826
>gi|384173746|ref|YP_005555131.1| Negative regulator of genetic competence ClpC/MecB [Bacillus
subtilis subsp. subtilis str. RO-NN-1]
gi|386756665|ref|YP_006229881.1| ATPase AAA-2 domain-containing protein [Bacillus sp. JS]
gi|428277501|ref|YP_005559236.1| class III stress response-related ATPase [Bacillus subtilis subsp.
natto BEST195]
gi|430755612|ref|YP_007211173.1| ATP-dependent Clp protease ClpC [Bacillus subtilis subsp. subtilis
str. BSP1]
gi|449092799|ref|YP_007425290.1| class III stress response-related ATPase, AAA+ superfamily
[Bacillus subtilis XF-1]
gi|291482458|dbj|BAI83533.1| class III stress response-related ATPase [Bacillus subtilis subsp.
natto BEST195]
gi|349592970|gb|AEP89157.1| Negative regulator of genetic competence ClpC/MecB [Bacillus
subtilis subsp. subtilis str. RO-NN-1]
gi|384929947|gb|AFI26625.1| ATPase AAA-2 domain-containing protein [Bacillus sp. JS]
gi|430020132|gb|AGA20738.1| ATP-dependent Clp protease ClpC [Bacillus subtilis subsp. subtilis
str. BSP1]
gi|449026714|gb|AGE61953.1| class III stress response-related ATPase, AAA+ superfamily
[Bacillus subtilis XF-1]
Length = 810
Score = 794 bits (2050), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 398/667 (59%), Positives = 520/667 (77%), Gaps = 10/667 (1%)
Query: 9 VGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCL 68
G+ G +S PTL+ +LT +A+E LDPV+GR +I+RV+++L RRTKNNP L
Sbjct: 147 TGSSAAGTNSNANTPTLDSLARDLTAIAKEDSLDPVIGRSKEIQRVIEVLSRRTKNNPVL 206
Query: 69 IGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLME 128
IGEPGVGKTAIAEGLAQ+I + +VP+ + K+V+TLDMG +VAGTKYRGEFE+RLKK+M+
Sbjct: 207 IGEPGVGKTAIAEGLAQQIINNEVPEILRDKRVMTLDMGTVVAGTKYRGEFEDRLKKVMD 266
Query: 129 EIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEK 188
EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTLDEYRK+IEK
Sbjct: 267 EIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEYRKYIEK 326
Query: 189 DPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRF 248
D ALERRFQP++V +PSVDE+IQIL+GLR+RYE HH++ TD+A+ +A +LS +YISDRF
Sbjct: 327 DAALERRFQPIQVDQPSVDESIQILQGLRDRYEAHHRVSITDDAIEAAVKLSDRYISDRF 386
Query: 249 LPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDRE 308
LPDKAIDLIDEAGS+VRLR P +ELE++L ++ KEK+ AV+ Q+FEKA LRD E
Sbjct: 387 LPDKAIDLIDEAGSKVRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFEKAASLRDTE 446
Query: 309 MDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLL 368
L+ Q+ KE + G VT DI +VS+WTG+PV K++ E+D+LL
Sbjct: 447 QRLREQVEDTKKSWKE------KQGQENSEVTVDDIAMVVSSWTGVPVSKIAQTETDKLL 500
Query: 369 KMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAA 428
ME LH RVIGQDEAV A+++A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+ALA
Sbjct: 501 NMENILHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAE 560
Query: 429 YYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIE 488
FG EE+MIR+DMSE+ME+H+ S+L+GSPPGYVGY EGGQLTE VRR+PY+VVL DEIE
Sbjct: 561 SIFGDEESMIRIDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPYSVVLLDEIE 620
Query: 489 KAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDE 548
KAHPDVFN++LQ+LEDGRLTDSKGRTVDF+NT+LIMTSNVG+S +++ + +GF++ +
Sbjct: 621 KAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTILIMTSNVGASELKR-NKYVGFNV--QD 677
Query: 549 KDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTK 608
+ ++ +K V ELK+ FRPEF+NR+DE+IVF L K + EI +M ++ RLK +
Sbjct: 678 ETQNHKDMKDKVMGELKRAFRPEFINRIDEIIVFHSLEKKHLTEIVSLMSDQLTKRLKEQ 737
Query: 609 DIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVD 668
D+ +++T+ + +V EEG + YGARPLRRAI + +ED ++E++L I +G +++DV+
Sbjct: 738 DLSIELTDAAKAKVAEEGVDLEYGARPLRRAIQKHVEDRLSEELLRGNIHKGQHIVLDVE 797
Query: 669 SDGNVTV 675
DG V
Sbjct: 798 -DGEFVV 803
>gi|336180205|ref|YP_004585580.1| ATPase AAA-2 domain-containing protein [Frankia symbiont of Datisca
glomerata]
gi|334861185|gb|AEH11659.1| ATPase AAA-2 domain protein [Frankia symbiont of Datisca glomerata]
Length = 834
Score = 794 bits (2050), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/689 (58%), Positives = 525/689 (76%), Gaps = 20/689 (2%)
Query: 11 AGVGGGSSGNKMPTL--EEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCL 68
A G S G +L +++G NLT A E KLDPV+GR+ +IERV+Q+L RRTKNNP L
Sbjct: 152 ATAGAPSEGTPSTSLVLDQFGRNLTAAARESKLDPVIGREKEIERVMQVLSRRTKNNPVL 211
Query: 69 IGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLME 128
IGEPGVGKTA+ EGLAQ I G+VP+T++ K++ TLD+G LVAG++YRG+FEERLKK+++
Sbjct: 212 IGEPGVGKTAVVEGLAQAIVKGEVPETLKDKQLYTLDLGALVAGSRYRGDFEERLKKVLK 271
Query: 129 EIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEK 188
EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEYRKH+EK
Sbjct: 272 EIRTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIGATTLDEYRKHLEK 331
Query: 189 DPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRF 248
D ALERRFQP++V EPSV TI+ILKGLR+RYE HH++ TD ALV+AA L+ +YISDRF
Sbjct: 332 DAALERRFQPIQVAEPSVAHTIEILKGLRDRYEAHHRVSITDGALVAAASLADRYISDRF 391
Query: 249 LPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDRE 308
LPDKAIDLIDEAGSR+R+R P + RE ++ + + ++K A+ QDFEKA LRDRE
Sbjct: 392 LPDKAIDLIDEAGSRMRIRRMTAPPDLREFDERIANVRRDKESAIDAQDFEKAASLRDRE 451
Query: 309 MDLKAQISALVDKGKEMSKAETEAGDVGPVVTEV---DIQHIVSAWTGIPVEKVSTDESD 365
L A+ K + E +AGD+ VV EV +I +++ WTGIPV K++ +E+
Sbjct: 452 KTLLAE--------KAKREKEWKAGDMD-VVAEVGDEEIAEVLAIWTGIPVFKLTEEETA 502
Query: 366 RLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKA 425
RLL+ME+ LH+RVIGQ +A+KA+S+AIRR R GLK+P RP SFIF+GP+GVGK+EL+K
Sbjct: 503 RLLRMEDELHRRVIGQQQAIKAVSQAIRRTRAGLKDPKRPGGSFIFAGPSGVGKTELSKT 562
Query: 426 LAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFD 485
LA + FG E+A+I+LDMSE+ME+HTVS+L+GSPPGYVGY EGGQLTE VRR+P++VVLFD
Sbjct: 563 LAEFLFGDEDALIQLDMSEYMEKHTVSRLVGSPPGYVGYEEGGQLTERVRRKPFSVVLFD 622
Query: 486 EIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLD 545
E+EKAHPDVFN +LQILEDGRLTDS+GR VDFKNT+LIMTSN+G+ I KG IGF
Sbjct: 623 EVEKAHPDVFNTLLQILEDGRLTDSQGRLVDFKNTVLIMTSNLGTRDISKGP-GIGFATG 681
Query: 546 YDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRL 605
D Y R+K+ V +ELKQ+FRPEFLNR+D++IVF QL++ E+ +I D+ML V +L
Sbjct: 682 QGAID--YERMKAKVQDELKQHFRPEFLNRIDDIIVFHQLSEAEIIQIVDLMLARVDIQL 739
Query: 606 KTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIV 665
K KD+ L++T + + ++GY+P GARPLRR I R +ED ++EK+L +K G+ V+
Sbjct: 740 KNKDMALELTPAAKALLAKKGYDPVLGARPLRRTIQREIEDVLSEKILYGTLKPGEIVVG 799
Query: 666 DVDSDGNVT--VLNGSSGAPESLADPLPV 692
DV+ +G V G P + D P+
Sbjct: 800 DVEGEGEAAKFVFRGEP-KPTQVPDAPPI 827
>gi|229148491|ref|ZP_04276747.1| Negative regulator of genetic competence [Bacillus cereus m1550]
gi|228634907|gb|EEK91480.1| Negative regulator of genetic competence [Bacillus cereus m1550]
Length = 811
Score = 794 bits (2050), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 398/666 (59%), Positives = 520/666 (78%), Gaps = 9/666 (1%)
Query: 5 STEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKN 64
S EA GG S+ PTL+ +LT +A E +LDPV+GR +I+RV+++L RRTKN
Sbjct: 144 SNEASSGHQGGSSTNASTPTLDSLARDLTVVARENRLDPVIGRSKEIQRVIEVLSRRTKN 203
Query: 65 NPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLK 124
NP LIGEPGVGKTAIAEGLAQ+I + +VP+T+ K+V+TLDMG +VAGTKYRGEFE+RLK
Sbjct: 204 NPVLIGEPGVGKTAIAEGLAQQIVNNEVPETLRDKRVMTLDMGTVVAGTKYRGEFEDRLK 263
Query: 125 KLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRK 184
K+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTLDEYRK
Sbjct: 264 KVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEYRK 323
Query: 185 HIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYI 244
+IEKD ALERRFQP+ V EPS++E+ QILKGLR+RYE HH++ TD+A+ +A +LS +YI
Sbjct: 324 YIEKDAALERRFQPIHVDEPSLEESTQILKGLRDRYEAHHRVSITDDAIDAAVKLSDRYI 383
Query: 245 SDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGEL 304
+DRFLPDKAIDLIDEA S+VRLR P +ELE +L +I KEK+ AV+ Q+FEKA L
Sbjct: 384 TDRFLPDKAIDLIDEAASKVRLRSYTTPPNLKELEVKLEEIRKEKDAAVQSQEFEKAASL 443
Query: 305 RDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDES 364
RD E L+ ++ + KE E VT DI ++VS WT IPV K++ E+
Sbjct: 444 RDMEQRLREKLEDTKRQWKEQQGKENSE------VTVEDIANVVSTWTRIPVSKLAQTET 497
Query: 365 DRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAK 424
D+LL +E LH RVIGQDEAV A+++A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+
Sbjct: 498 DKLLNLESILHDRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELAR 557
Query: 425 ALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLF 484
ALA FG E+AMIR+DMSE+ME+H+ S+L+GSPPGYVGY EGGQLTE VRR+PY+VVL
Sbjct: 558 ALAESMFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPYSVVLL 617
Query: 485 DEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDL 544
DE+EKAHPDVFN++LQ+LEDGRLTDSKGRTVDF+NT++IMTSNVG+ +++ + +GF++
Sbjct: 618 DEVEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTIVIMTSNVGAEALKR-NKHLGFNV 676
Query: 545 DYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDR 604
+ +D Y+ +K V +ELK+ FRPEFLNR+DE+IVF L K ++EI +M+ ++ +R
Sbjct: 677 QDESRD--YSDMKGKVMDELKKAFRPEFLNRIDEIIVFHMLEKKHIQEIVTLMVNQLVNR 734
Query: 605 LKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVI 664
LK ++IELQ+TE + ++G++ YGARPLRRAI + +ED ++E++L I++G VI
Sbjct: 735 LKEQEIELQLTEGAIAAIADKGFDREYGARPLRRAIQKHVEDRLSEELLKGAIEKGQKVI 794
Query: 665 VDVDSD 670
DV+ +
Sbjct: 795 FDVEGE 800
>gi|228912821|ref|ZP_04076468.1| Negative regulator of genetic competence [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
gi|228846757|gb|EEM91762.1| Negative regulator of genetic competence [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
Length = 811
Score = 794 bits (2050), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/669 (59%), Positives = 520/669 (77%), Gaps = 9/669 (1%)
Query: 5 STEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKN 64
S EA GG S+ PTL+ +LT +A E +LDPV+GR +I+RV+++L RRTKN
Sbjct: 144 SNEASSGHQGGSSTNANTPTLDSLARDLTVVARENRLDPVIGRGKEIQRVIEVLSRRTKN 203
Query: 65 NPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLK 124
NP LIGEPGVGKTAIAEGLAQ+I + +VP+T+ K+V+TLDMG +VAGTKYRGEFE+RLK
Sbjct: 204 NPVLIGEPGVGKTAIAEGLAQQIVNNEVPETLRDKRVMTLDMGTVVAGTKYRGEFEDRLK 263
Query: 125 KLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRK 184
K+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTLDEYRK
Sbjct: 264 KVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEYRK 323
Query: 185 HIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYI 244
+IEKD ALERRFQP+ V EPS+DE+ QILKGLR+RYE HH++ TD+A+ +A +LS +YI
Sbjct: 324 YIEKDAALERRFQPIHVDEPSLDESTQILKGLRDRYEAHHRVSITDDAIDAAVKLSDRYI 383
Query: 245 SDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGEL 304
+DRFLPDKAIDLIDEA S+VRLR P +ELE +L +I KEK+ AV+ Q+FEKA L
Sbjct: 384 TDRFLPDKAIDLIDEAASKVRLRSYTTPPNLKELEVKLEEIRKEKDAAVQSQEFEKAASL 443
Query: 305 RDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDES 364
RD E L+ ++ + KE E VT DI ++VS WT IPV K++ E+
Sbjct: 444 RDMEQRLREKLEDTKRQWKEQQGKENSE------VTVEDIANVVSTWTRIPVSKLAQTET 497
Query: 365 DRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAK 424
D+LL +E LH RVIGQDEAV A+++A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+
Sbjct: 498 DKLLNLESILHDRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELAR 557
Query: 425 ALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLF 484
ALA FG E+AMIR+DMSE+ME+H+ S+L+GSPPGYVGY EGGQLTE VRR+PY+VVL
Sbjct: 558 ALAESMFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPYSVVLL 617
Query: 485 DEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDL 544
DE+EKAHPDVFN++LQ+LEDGRLTDSKGRTVDF+NT++IMTSNVG+ +++ + +GF++
Sbjct: 618 DEVEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTIVIMTSNVGAEALKR-NKHLGFNV 676
Query: 545 DYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDR 604
+ +D Y+ +K V +ELK+ FRPEFLNR+DE+IVF L K ++EI +M+ ++ +R
Sbjct: 677 QDESRD--YSEMKGKVMDELKKAFRPEFLNRIDEIIVFHMLEKKHIQEIVTLMVNQLVNR 734
Query: 605 LKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVI 664
LK ++IEL +TE + ++G++ YGARPLRRAI + +ED ++E++L I++G VI
Sbjct: 735 LKEQEIELHLTEGAISAIADKGFDREYGARPLRRAIQKHVEDRLSEELLKGAIEKGQKVI 794
Query: 665 VDVDSDGNV 673
DV+ + V
Sbjct: 795 FDVEGESFV 803
>gi|452990568|emb|CCQ98240.1| class III stress response-related ATPase, AAA+ superfamily
[Clostridium ultunense Esp]
Length = 812
Score = 794 bits (2050), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 383/651 (58%), Positives = 524/651 (80%), Gaps = 7/651 (1%)
Query: 20 NKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAI 79
+ P L++YG +LTKL+ +GK+DPV+GR +IERV+QIL RRTKNNP LIGEPGVGKTAI
Sbjct: 159 DSTPNLDKYGRDLTKLSIDGKIDPVIGRAKEIERVIQILSRRTKNNPVLIGEPGVGKTAI 218
Query: 80 AEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILF 139
AEGLAQ+I G VP+ I+ K+V+TLD+ ++AG KYRGEFEERLK +M+E+K++ IILF
Sbjct: 219 AEGLAQKIVEGQVPEIIKDKRVVTLDLPGMLAGAKYRGEFEERLKSVMKELKEAGNIILF 278
Query: 140 IDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPV 199
IDE+HT+IGAGAAEGAIDA+NILKP LARGELQ IGATT+DEYRKHIEKD ALERRFQP+
Sbjct: 279 IDELHTIIGAGAAEGAIDASNILKPVLARGELQVIGATTIDEYRKHIEKDSALERRFQPI 338
Query: 200 KVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDE 259
V EP+V++TI+IL+GLR+RYE HH+++ +DEAL +AA+LS +YI+DRFLPDKAIDLIDE
Sbjct: 339 MVEEPTVEDTIKILEGLRDRYEAHHRVKISDEALKAAAELSSRYITDRFLPDKAIDLIDE 398
Query: 260 AGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALV 319
A S +R+ P+ ++LE++L ++++EK EA+ Q+FEKA ++RD E +++ ++
Sbjct: 399 AASMIRINSYVAPDGLKDLEEKLEELSQEKEEAINTQNFEKAAKIRDMEKNIREELQ--- 455
Query: 320 DKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVI 379
KE ++ E E VV +I H+VS WTG+PV +++T+ES RLL +E+TLH++VI
Sbjct: 456 ---KEKNRWEKEKQTSDMVVGYDEIAHVVSNWTGVPVSRMTTEESQRLLNLEDTLHEKVI 512
Query: 380 GQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIR 439
GQ++AV+A+S A+RRARVGLK+P +P+ +FIF GPTGVGK+ LAKALA FG EE+MIR
Sbjct: 513 GQNQAVEAVSNAVRRARVGLKDPKKPVGTFIFVGPTGVGKTYLAKALAETLFGDEESMIR 572
Query: 440 LDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMML 499
+DMSE+ME+H+VS+L+GSPPGYVGY EGGQLTEAVRR+PY+V+LFDEIEKAHPDVFN++L
Sbjct: 573 IDMSEYMEKHSVSRLVGSPPGYVGYDEGGQLTEAVRRKPYSVILFDEIEKAHPDVFNILL 632
Query: 500 QILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSL 559
QIL+DGRLTDSKGRTVDFKNT++IMTSNVG++ I K +GF +E+ Y ++K
Sbjct: 633 QILDDGRLTDSKGRTVDFKNTVIIMTSNVGATSIRKQN-VLGFSPASEEEKEEYEKMKEN 691
Query: 560 VTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFR 619
+ +EL++ FRPEFLNR+DE+IVF L + +VKEI IM+K++ ++K +I ++VT+R
Sbjct: 692 IMDELRRTFRPEFLNRIDEVIVFHSLKEEDVKEIVGIMIKDLEKKMKKLNINIKVTDRTI 751
Query: 620 ERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSD 670
+ + +G++P YGARPL R I +++ED +AE++L ++ + D++ +D D
Sbjct: 752 DYISRKGFDPVYGARPLERTITKMIEDQLAEEILKGKVSKDDNISIDFKDD 802
>gi|228950630|ref|ZP_04112764.1| Negative regulator of genetic competence [Bacillus thuringiensis
serovar kurstaki str. T03a001]
gi|229067847|ref|ZP_04201164.1| Negative regulator of genetic competence [Bacillus cereus F65185]
gi|423422315|ref|ZP_17399346.1| chaperone ClpB [Bacillus cereus BAG3X2-2]
gi|423439463|ref|ZP_17416401.1| chaperone ClpB [Bacillus cereus BAG4X12-1]
gi|423507892|ref|ZP_17484459.1| chaperone ClpB [Bacillus cereus HD73]
gi|449086748|ref|YP_007419189.1| Negative regulator of genetic competence [Bacillus thuringiensis
serovar kurstaki str. HD73]
gi|228715206|gb|EEL67065.1| Negative regulator of genetic competence [Bacillus cereus F65185]
gi|228808981|gb|EEM55466.1| Negative regulator of genetic competence [Bacillus thuringiensis
serovar kurstaki str. T03a001]
gi|401112817|gb|EJQ20691.1| chaperone ClpB [Bacillus cereus BAG4X12-1]
gi|401120032|gb|EJQ27833.1| chaperone ClpB [Bacillus cereus BAG3X2-2]
gi|402442679|gb|EJV74600.1| chaperone ClpB [Bacillus cereus HD73]
gi|449020505|gb|AGE75668.1| Negative regulator of genetic competence [Bacillus thuringiensis
serovar kurstaki str. HD73]
Length = 811
Score = 793 bits (2049), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 398/666 (59%), Positives = 519/666 (77%), Gaps = 9/666 (1%)
Query: 5 STEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKN 64
S EA GG S+ PTL+ +LT +A E +LDPV+GR +I+RV+++L RRTKN
Sbjct: 144 SNEASSGHQGGSSTNANTPTLDSLARDLTVVARENRLDPVIGRSKEIQRVIEVLSRRTKN 203
Query: 65 NPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLK 124
NP LIGEPGVGKTAIAEGLAQ+I + +VP+T+ K+V+TLDMG +VAGTKYRGEFE+RLK
Sbjct: 204 NPVLIGEPGVGKTAIAEGLAQQIVNNEVPETLRDKRVMTLDMGTVVAGTKYRGEFEDRLK 263
Query: 125 KLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRK 184
K+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTLDEYRK
Sbjct: 264 KVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEYRK 323
Query: 185 HIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYI 244
+IEKD ALERRFQP+ V EPS++E+ QILKGLR+RYE HH++ TD+A+ +A +LS +YI
Sbjct: 324 YIEKDAALERRFQPIHVDEPSLEESTQILKGLRDRYEAHHRVSITDDAIDAAVKLSDRYI 383
Query: 245 SDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGEL 304
+DRFLPDKAIDLIDEA S+VRLR P +ELE L +I KEK+ AV+ Q+FEKA L
Sbjct: 384 TDRFLPDKAIDLIDEAASKVRLRSYTTPPNLKELEVNLEEIRKEKDAAVQSQEFEKAASL 443
Query: 305 RDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDES 364
RD E L+ ++ + KE E VT DI ++VS WT IPV K++ E+
Sbjct: 444 RDMEQRLREKLEDTKRQWKEQQGKENSE------VTVEDIANVVSTWTRIPVSKLAQTET 497
Query: 365 DRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAK 424
D+LL +E LH RVIGQDEAV A+++A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+
Sbjct: 498 DKLLNLESILHDRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELAR 557
Query: 425 ALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLF 484
ALA FG E+AMIR+DMSE+ME+H+ S+L+GSPPGYVGY EGGQLTE VRR+PY+VVL
Sbjct: 558 ALAESMFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPYSVVLL 617
Query: 485 DEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDL 544
DE+EKAHPDVFN++LQ+LEDGRLTDSKGRTVDF+NT++IMTSNVG+ +++ + +GF++
Sbjct: 618 DEVEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTIVIMTSNVGAEALKR-NKHLGFNV 676
Query: 545 DYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDR 604
+ +D Y+ +K V +ELK+ FRPEFLNR+DE+IVF L K ++EI +M+ ++ +R
Sbjct: 677 QDESRD--YSDMKGKVMDELKKAFRPEFLNRIDEIIVFHMLEKKHIQEIVTLMVNQLVNR 734
Query: 605 LKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVI 664
LK ++IELQ+TE + ++G++ YGARPLRRAI + +ED ++E++L I++G VI
Sbjct: 735 LKEQEIELQLTEGAIAAIADKGFDREYGARPLRRAIQKHVEDRLSEELLKGAIEKGQKVI 794
Query: 665 VDVDSD 670
DV+ +
Sbjct: 795 FDVEGE 800
>gi|309810835|ref|ZP_07704636.1| negative regulator of genetic competence ClpC/MecB [Dermacoccus sp.
Ellin185]
gi|308435141|gb|EFP58972.1| negative regulator of genetic competence ClpC/MecB [Dermacoccus sp.
Ellin185]
Length = 874
Score = 793 bits (2049), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/690 (58%), Positives = 531/690 (76%), Gaps = 20/690 (2%)
Query: 7 EAVGAGVGGGSSGNKM-------PTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 59
E AGVG SSG L+++G NLT+ A EGKLDPV+GR+ +IERV+Q+L
Sbjct: 150 EPQAAGVGASSSGGPAEGTPAGSTVLDQFGRNLTQAAREGKLDPVIGREKEIERVMQVLS 209
Query: 60 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 119
RRTKNNP LIGEPGVGKTA+ EGLA I +GDVP+T++ K + TLD+G LVAG++YRG+F
Sbjct: 210 RRTKNNPVLIGEPGVGKTAVVEGLAADIVAGDVPETLKDKHLYTLDLGSLVAGSRYRGDF 269
Query: 120 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 179
EERLKK+++EI+ +IILFIDE+H+L+GAGAAEGAIDAA+ILKP LARGELQ IGATTL
Sbjct: 270 EERLKKVLKEIRTRGDIILFIDEIHSLVGAGAAEGAIDAASILKPMLARGELQTIGATTL 329
Query: 180 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 239
DEYRKHIEKD ALERRFQP++V EP++ + I+ILKGLR+RYE HH++ TD ALV A +
Sbjct: 330 DEYRKHIEKDAALERRFQPIQVNEPTIPQAIEILKGLRDRYEAHHRVTITDAALVGAVNM 389
Query: 240 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 299
+ +YI+DRFLPDKAIDLIDEAG+R+R+R P E RE ++++ + +EK A+ QDFE
Sbjct: 390 ADRYITDRFLPDKAIDLIDEAGARLRIRRMTAPPELREFDEKIVHVRREKESAIDSQDFE 449
Query: 300 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDV--GPVVTEVDIQHIVSAWTGIPVE 357
KA LRD E L + KE + E +AGDV V+ E + +++A TGIPV
Sbjct: 450 KAAALRDDERKLVEE--------KEAKEKEWKAGDVDLAAVLDEELVAEVLAASTGIPVF 501
Query: 358 KVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGV 417
K++ +ES RLL+ME+ LHKRVIG D+A+KA+S+AIRR R GLK+P RP SFIF+GPTGV
Sbjct: 502 KLTEEESSRLLRMEDELHKRVIGNDDAIKALSQAIRRTRAGLKDPRRPGGSFIFAGPTGV 561
Query: 418 GKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRR 477
GK+ELAK+LA + FG E+A+I LDMSE+ E+HTVS+L GSPPGYVGY EGGQLTE VRR+
Sbjct: 562 GKTELAKSLAEFLFGDEDALITLDMSEYAEKHTVSRLFGSPPGYVGYEEGGQLTEKVRRK 621
Query: 478 PYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGG 537
P++VVLFDE+EKAH D+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N+G+ I K G
Sbjct: 622 PFSVVLFDEVEKAHADIFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNLGTRDIAK-G 680
Query: 538 RRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIM 597
+GF D++ S+Y+R+K+ V EELKQ+FRPEFLNR+D+ IVF QL++ E+ EI D+M
Sbjct: 681 VSLGFAAGNDQR-SNYDRMKAKVGEELKQHFRPEFLNRVDDTIVFPQLSQAEIVEIVDLM 739
Query: 598 LKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREI 657
+ ++ +RLK +D+ +++T+ ++ + + GY+P+ GARPLRR I R +ED ++EK+L EI
Sbjct: 740 VAKLDERLKDQDMAIELTQGAKDLLAKRGYDPALGARPLRRTIQREIEDQLSEKILFGEI 799
Query: 658 KEGDSVIVDVDSDGNVTVLNGSSGAPESLA 687
+GD V+VDV+ +G SG P SL+
Sbjct: 800 SKGDLVLVDVEGEGKEATFT-FSGTPISLS 828
>gi|289433587|ref|YP_003463459.1| ClpC ATPase [Listeria seeligeri serovar 1/2b str. SLCC3954]
gi|289169831|emb|CBH26369.1| ClpC ATPase [Listeria seeligeri serovar 1/2b str. SLCC3954]
Length = 820
Score = 793 bits (2049), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 388/666 (58%), Positives = 514/666 (77%), Gaps = 10/666 (1%)
Query: 10 GAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLI 69
G G ++ PTL+ +LT +A E LDPV+GR +I+RV+++L RRTKNNP LI
Sbjct: 147 ATGAGRQTNTQATPTLDSLARDLTVIAREDNLDPVIGRSKEIQRVIEVLSRRTKNNPVLI 206
Query: 70 GEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEE 129
GEPGVGKTAIAEGLAQ+I +VP+T+ GK+V+TLDMG +VAGTKYRGEFE+RLKK+M+E
Sbjct: 207 GEPGVGKTAIAEGLAQQIVRNEVPETLRGKRVMTLDMGTVVAGTKYRGEFEDRLKKVMDE 266
Query: 130 IKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKD 189
I+Q+ +ILFIDE+HTLIGAG AEGAIDA+NILKP LARGELQCIGATTLDEYRK+IEKD
Sbjct: 267 IRQAGNVILFIDELHTLIGAGGAEGAIDASNILKPPLARGELQCIGATTLDEYRKYIEKD 326
Query: 190 PALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFL 249
ALERRFQP+KV EPSV+E+IQIL GLR+RYE HH++ TDEAL +A +LS +YISDRFL
Sbjct: 327 AALERRFQPIKVDEPSVEESIQILHGLRDRYEAHHRVAITDEALDAAVRLSDRYISDRFL 386
Query: 250 PDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREM 309
PDKAID+IDEAGS+VRL+ P+ +E+E L + KEK+ AV+GQ+FEKA LRD+E
Sbjct: 387 PDKAIDVIDEAGSKVRLKSFTTPKNVKEMENNLTDLKKEKDAAVQGQEFEKAAALRDKEH 446
Query: 310 DLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLK 369
LK + KE + VTE + +V++WTGIPV K++ E+++LL
Sbjct: 447 KLKKSLEETKANWKEKQGLDHSE------VTEDIVAEVVASWTGIPVAKLAETETNKLLN 500
Query: 370 MEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAY 429
ME+ LH+RVIGQD AVKA+S A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+ALA
Sbjct: 501 MEKLLHERVIGQDAAVKAVSLAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAES 560
Query: 430 YFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEK 489
FG E++MIR+DMSE+ME+ + ++L+G+PPGYVGY EGGQLTE VR++PY+VVL DEIEK
Sbjct: 561 MFGDEDSMIRIDMSEYMEKFSTARLVGAPPGYVGYEEGGQLTEKVRQKPYSVVLLDEIEK 620
Query: 490 AHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEK 549
AHPDVFNM+LQ+L+DGRLTDSKGR VDF+NT++IMTSN+G+ + K + +GF++ K
Sbjct: 621 AHPDVFNMLLQVLDDGRLTDSKGRVVDFRNTVIIMTSNIGAQEM-KQDKSMGFNVTDPLK 679
Query: 550 DSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKD 609
D + ++ V ++LKQ FRPEF+NR+DE IVF L + E+K+I ++ ++ RL +D
Sbjct: 680 D--HKAMEHRVLQDLKQAFRPEFINRIDETIVFHSLQEKELKQIVTLLTAQLTKRLSERD 737
Query: 610 IELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDS 669
I +++TE + ++ ++GY+P YGARPL+RAI + +ED ++E++L IK GD++ + V
Sbjct: 738 IHVKLTEGAKSKIAKDGYDPEYGARPLKRAIQKEVEDMLSEELLRGNIKVGDTIEIGV-K 796
Query: 670 DGNVTV 675
DG + V
Sbjct: 797 DGKLEV 802
>gi|118411088|ref|YP_874483.1| ATP-dependent clp protease ATP-binding subunit [Phaeodactylum
tricornutum]
gi|116739835|gb|ABK20706.1| ATP-dependent clp protease ATP-binding subunit [Phaeodactylum
tricornutum]
Length = 926
Score = 793 bits (2049), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/664 (58%), Positives = 510/664 (76%), Gaps = 31/664 (4%)
Query: 19 GNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTA 78
G+ PTL+EY N+TK A +G LDPV+GR+ +I+ V+ +L RRTKNNP LIGEPGVGKTA
Sbjct: 167 GSPTPTLDEYAENITKEAIDGNLDPVIGREKEIDDVIAVLARRTKNNPVLIGEPGVGKTA 226
Query: 79 IAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIIL 138
+AEGLAQ I + VPD ++G ++ LD+G ++AGTKYRGEFEERLK+++EE + +I+
Sbjct: 227 VAEGLAQLILTEKVPDFLDGSLIMALDLGSILAGTKYRGEFEERLKRIVEEAQNDSAVII 286
Query: 139 FIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQP 198
IDE+HTL+GAGAAEGA+DAANILKP+LARG+ +CIGATT DEYRK+IE+DPALERRFQP
Sbjct: 287 VIDEIHTLVGAGAAEGAVDAANILKPALARGKFRCIGATTNDEYRKYIERDPALERRFQP 346
Query: 199 VKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLID 258
V V EPSV TI+IL+GLR ++E HH L Y D+AL AA LS +Y++DR+LPDKAID++D
Sbjct: 347 VHVEEPSVGTTIEILRGLRSKFEQHHTLSYHDKALEQAAILSDKYVADRYLPDKAIDVLD 406
Query: 259 EAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQI--- 315
EAG+RVRL + +LP R L EL++ K+K + ++ DFE A +L D EM+++ I
Sbjct: 407 EAGARVRLENRRLPLGLRSLMHELQETIKDKEDCIKEHDFEAAKQLLDHEMEVRTHIRIM 466
Query: 316 --SALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEET 373
SAL + + S+ + + +VTE D+ +VS WTGIPV K++ ES RLLKME+T
Sbjct: 467 KQSALTSEARGFSRRDVD------MVTETDVSDVVSNWTGIPVTKITGSESARLLKMEDT 520
Query: 374 LHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGS 433
+H+R+IGQ AV A+SRAIRRARVGL+NPNRPIASFIF+GPTGVGK+EL KAL+ Y FGS
Sbjct: 521 IHERIIGQKHAVVAVSRAIRRARVGLRNPNRPIASFIFAGPTGVGKTELTKALSDYMFGS 580
Query: 434 EEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPD 493
EE+MIRLDMSE+ME+HTV+KLIGSPPGYVGY EGGQLTEAVR +PY+VVL DE+EK HPD
Sbjct: 581 EESMIRLDMSEYMEKHTVAKLIGSPPGYVGYNEGGQLTEAVRSKPYSVVLLDEVEKGHPD 640
Query: 494 VFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEK------------GGRRIG 541
VFN++LQIL+DGRLTDSKGR +DF NTL+IMT+N+GS +IE+ GG +I
Sbjct: 641 VFNLLLQILDDGRLTDSKGRVIDFTNTLIIMTTNLGSKIIERESGIKSKTEQGEGGFKIT 700
Query: 542 FD--LDYDE-----KDSS-YNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEI 593
D + ++ KD + R+ LV +ELK +FRPEFLNR+DE+IVF LT++++ EI
Sbjct: 701 PDAVIGWEPAPEPIKDPEVFERVTKLVNDELKNFFRPEFLNRIDEIIVFNHLTRIDIWEI 760
Query: 594 ADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKML 653
++M+K V +RLK K I L V + + +EGY+P YGARPLRRAIM+ LED++AE+ L
Sbjct: 761 CELMIKSVQNRLKDKGINLIVELSVQAFLTDEGYDPIYGARPLRRAIMKYLEDTLAEQCL 820
Query: 654 AREI 657
++ +
Sbjct: 821 SKTL 824
>gi|429503620|ref|YP_007184804.1| Clp protease ATP-binding subunit [Bacillus amyloliquefaciens subsp.
plantarum AS43.3]
gi|429485210|gb|AFZ89134.1| Clp protease ATP-binding subunit [Bacillus amyloliquefaciens subsp.
plantarum AS43.3]
Length = 810
Score = 793 bits (2049), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/669 (59%), Positives = 519/669 (77%), Gaps = 14/669 (2%)
Query: 9 VGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCL 68
G+ G +S PTL+ +LT +A+E LDPV+GR +I+RV+++L RRTKNNP L
Sbjct: 147 TGSSASGTNSNANTPTLDSLARDLTAIAKEDSLDPVIGRSKEIQRVIEVLSRRTKNNPVL 206
Query: 69 IGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLME 128
IGEPGVGKTAIAEGLAQ+I + +VP+ + K+V+TLDMG +VAGTKYRGEFE+RLKK+M+
Sbjct: 207 IGEPGVGKTAIAEGLAQQIINNEVPEILRDKRVMTLDMGTVVAGTKYRGEFEDRLKKVMD 266
Query: 129 EIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEK 188
EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTLDEYRK+IEK
Sbjct: 267 EIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEYRKYIEK 326
Query: 189 DPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRF 248
D ALERRFQP++V +PS DE+IQILKGLR+RYE HH++ TDEA+ +A +LS +YISDRF
Sbjct: 327 DAALERRFQPIQVDQPSADESIQILKGLRDRYEAHHRVSITDEAIEAAVKLSDRYISDRF 386
Query: 249 LPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDRE 308
LPDKAIDLIDEAGS+VRLR P +ELE++L ++ KEK+ AV+ Q+FEKA LRD E
Sbjct: 387 LPDKAIDLIDEAGSKVRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFEKAASLRDTE 446
Query: 309 MDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLL 368
L+ Q+ KE + G V+ DI +VS+WTG+PV K++ E+D+LL
Sbjct: 447 QRLREQVEDTKKTWKE------KQGQENSEVSVEDIAMVVSSWTGVPVSKIAQTETDKLL 500
Query: 369 KMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAA 428
ME LH RVIGQDEAV A+++A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+ALA
Sbjct: 501 NMENILHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAE 560
Query: 429 YYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIE 488
FG EEAMIR+DMSE+ME+H+ S+L+GSPPGYVGY EGGQLTE VRR+PY+VVL DEIE
Sbjct: 561 SIFGDEEAMIRVDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPYSVVLLDEIE 620
Query: 489 KAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDE 548
KAHPDVFN++LQ+LEDGRLTDSKGRTVDF+NT+LIMTSNVG+S +++ + +GF++
Sbjct: 621 KAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTILIMTSNVGASELKR-NKYVGFNV---- 675
Query: 549 KDSSYNR--IKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLK 606
+D S N +K V ELK+ FRPEF+NR+DE+IVF L K + +I +M ++ RLK
Sbjct: 676 QDESQNHKDMKDKVMGELKRAFRPEFINRIDEIIVFHSLEKKHLTDIVSLMSDQLTKRLK 735
Query: 607 TKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVD 666
+D+ +++T+ + +V EEG + YGARPLRRAI + +ED ++E++L I +G +++D
Sbjct: 736 EQDLSIELTDAAKAKVAEEGVDLEYGARPLRRAIQKHVEDRLSEELLRGNIDKGQHIVLD 795
Query: 667 VDSDGNVTV 675
V+ DG V
Sbjct: 796 VE-DGEFVV 803
>gi|154684604|ref|YP_001419765.1| ClpC [Bacillus amyloliquefaciens FZB42]
gi|375360776|ref|YP_005128815.1| ATP-dependent Clp protease ATP-binding subunit clpC [Bacillus
amyloliquefaciens subsp. plantarum CAU B946]
gi|384263716|ref|YP_005419423.1| class III stress response-related ATPase ClpC [Bacillus
amyloliquefaciens subsp. plantarum YAU B9601-Y2]
gi|387896613|ref|YP_006326909.1| Clp protease ATP-binding subunit [Bacillus amyloliquefaciens Y2]
gi|394994757|ref|ZP_10387464.1| ClpC [Bacillus sp. 916]
gi|451348524|ref|YP_007447155.1| Clp protease ATP-binding subunit [Bacillus amyloliquefaciens IT-45]
gi|452854149|ref|YP_007495832.1| class III stress response-related ATPase, AAA+ superfamily
[Bacillus amyloliquefaciens subsp. plantarum UCMB5036]
gi|154350455|gb|ABS72534.1| ClpC [Bacillus amyloliquefaciens FZB42]
gi|371566770|emb|CCF03620.1| ATP-dependent Clp protease ATP-binding subunit clpC [Bacillus
amyloliquefaciens subsp. plantarum CAU B946]
gi|380497069|emb|CCG48107.1| class III stress response-related ATPase ClpC [Bacillus
amyloliquefaciens subsp. plantarum YAU B9601-Y2]
gi|387170723|gb|AFJ60184.1| Clp protease ATP-binding subunit [Bacillus amyloliquefaciens Y2]
gi|393804324|gb|EJD65736.1| ClpC [Bacillus sp. 916]
gi|449852282|gb|AGF29274.1| Clp protease ATP-binding subunit [Bacillus amyloliquefaciens IT-45]
gi|452078409|emb|CCP20159.1| class III stress response-related ATPase, AAA+ superfamily
[Bacillus amyloliquefaciens subsp. plantarum UCMB5036]
Length = 810
Score = 793 bits (2049), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/669 (59%), Positives = 519/669 (77%), Gaps = 14/669 (2%)
Query: 9 VGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCL 68
G+ G +S PTL+ +LT +A+E LDPV+GR +I+RV+++L RRTKNNP L
Sbjct: 147 TGSSASGTNSNANTPTLDSLARDLTAIAKEDSLDPVIGRSKEIQRVIEVLSRRTKNNPVL 206
Query: 69 IGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLME 128
IGEPGVGKTAIAEGLAQ+I + +VP+ + K+V+TLDMG +VAGTKYRGEFE+RLKK+M+
Sbjct: 207 IGEPGVGKTAIAEGLAQQIINNEVPEILRDKRVMTLDMGTVVAGTKYRGEFEDRLKKVMD 266
Query: 129 EIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEK 188
EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTLDEYRK+IEK
Sbjct: 267 EIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEYRKYIEK 326
Query: 189 DPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRF 248
D ALERRFQP++V +PS DE+IQILKGLR+RYE HH++ TDEA+ +A +LS +YISDRF
Sbjct: 327 DAALERRFQPIQVDQPSADESIQILKGLRDRYEAHHRVSITDEAIEAAVKLSDRYISDRF 386
Query: 249 LPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDRE 308
LPDKAIDLIDEAGS+VRLR P +ELE++L ++ KEK+ AV+ Q+FEKA LRD E
Sbjct: 387 LPDKAIDLIDEAGSKVRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFEKAASLRDTE 446
Query: 309 MDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLL 368
L+ Q+ KE + G V+ DI +VS+WTG+PV K++ E+D+LL
Sbjct: 447 QRLREQVEDTKKTWKE------KQGQENSEVSVEDIAMVVSSWTGVPVSKIAQTETDKLL 500
Query: 369 KMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAA 428
ME LH RVIGQDEAV A+++A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+ALA
Sbjct: 501 NMESILHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAE 560
Query: 429 YYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIE 488
FG EEAMIR+DMSE+ME+H+ S+L+GSPPGYVGY EGGQLTE VRR+PY+VVL DEIE
Sbjct: 561 SIFGDEEAMIRVDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPYSVVLLDEIE 620
Query: 489 KAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDE 548
KAHPDVFN++LQ+LEDGRLTDSKGRTVDF+NT+LIMTSNVG+S +++ + +GF++
Sbjct: 621 KAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTILIMTSNVGASELKR-NKYVGFNV---- 675
Query: 549 KDSSYNR--IKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLK 606
+D S N +K V ELK+ FRPEF+NR+DE+IVF L K + +I +M ++ RLK
Sbjct: 676 QDESQNHKDMKDKVMGELKRAFRPEFINRIDEIIVFHSLEKKHLTDIVSLMSDQLTKRLK 735
Query: 607 TKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVD 666
+D+ +++T+ + +V EEG + YGARPLRRAI + +ED ++E++L I +G +++D
Sbjct: 736 EQDLSIELTDAAKAKVAEEGVDLEYGARPLRRAIQKHVEDRLSEELLRGNIDKGQHIVLD 795
Query: 667 VDSDGNVTV 675
V+ DG V
Sbjct: 796 VE-DGEFVV 803
>gi|206972226|ref|ZP_03233173.1| negative regulator of genetic competence ClpC/MecB [Bacillus cereus
AH1134]
gi|206732800|gb|EDZ49975.1| negative regulator of genetic competence ClpC/MecB [Bacillus cereus
AH1134]
Length = 811
Score = 793 bits (2048), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/666 (59%), Positives = 520/666 (78%), Gaps = 9/666 (1%)
Query: 5 STEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKN 64
S EA GG S+ PTL+ +LT +A E +LDPV+GR +I+RV+++L RRTKN
Sbjct: 144 SNEASSGHQGGSSTNANTPTLDSLARDLTVVARENRLDPVIGRSKEIQRVIEVLSRRTKN 203
Query: 65 NPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLK 124
NP LIGEPGVGKTAIAEGLAQ+I + +VP+T+ K+V+TLDMG +VAGTKYRGEFE+RLK
Sbjct: 204 NPVLIGEPGVGKTAIAEGLAQQIVNNEVPETLRDKRVMTLDMGTVVAGTKYRGEFEDRLK 263
Query: 125 KLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRK 184
K+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTLDEYRK
Sbjct: 264 KVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEYRK 323
Query: 185 HIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYI 244
+IEKD ALERRFQP+ V EPS++E+ QILKGLR+RYE HH++ TD+A+ +A +LS +YI
Sbjct: 324 YIEKDAALERRFQPIHVDEPSLEESTQILKGLRDRYEAHHRVSITDDAIDAAVKLSDRYI 383
Query: 245 SDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGEL 304
+DRFLPDKAIDLIDEA S+VRLR P +ELE +L +I KEK+ AV+ Q+FEKA L
Sbjct: 384 TDRFLPDKAIDLIDEAASKVRLRSYTTPPNLKELEVKLEEIRKEKDAAVQSQEFEKAASL 443
Query: 305 RDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDES 364
RD E L+ ++ + KE E VT DI ++VS WT IPV K++ E+
Sbjct: 444 RDMEQRLREKLEDTKRQWKEQQGKENSE------VTVEDIANVVSTWTRIPVSKLAQTET 497
Query: 365 DRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAK 424
D+LL +E LH RVIGQDEAV A+++A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+
Sbjct: 498 DKLLNLESILHDRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELAR 557
Query: 425 ALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLF 484
ALA FG E+AMIR+DMSE+ME+H+ S+L+GSPPGYVGY EGGQLTE VRR+PY+VVL
Sbjct: 558 ALAESMFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPYSVVLL 617
Query: 485 DEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDL 544
DE+EKAHPDVFN++LQ+LEDGRLTDSKGRTVDF+NT++IMTSNVG+ +++ + +GF++
Sbjct: 618 DEVEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTIVIMTSNVGAEALKR-NKHLGFNV 676
Query: 545 DYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDR 604
+ +D Y+ +K V +ELK+ FRPEFLNR+DE+IVF L K ++EI +M+ ++ +R
Sbjct: 677 QDESRD--YSDMKGKVMDELKKAFRPEFLNRIDEIIVFHMLEKKHIQEIVTLMVNQLVNR 734
Query: 605 LKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVI 664
LK ++IELQ+TE + ++G++ YGARPLRRAI + +ED ++E++L I++G V+
Sbjct: 735 LKEQEIELQLTEGAIAAIADKGFDREYGARPLRRAIQKHVEDRLSEELLKGAIEKGQKVM 794
Query: 665 VDVDSD 670
DV+ +
Sbjct: 795 FDVEGE 800
>gi|30260272|ref|NP_842649.1| negative regulator of genetic competence ClpC/MecB [Bacillus
anthracis str. Ames]
gi|42779162|ref|NP_976409.1| negative regulator of genetic competence ClpC/MecB [Bacillus cereus
ATCC 10987]
gi|47525336|ref|YP_016685.1| negative regulator of genetic competence ClpC/MecB [Bacillus
anthracis str. 'Ames Ancestor']
gi|47569816|ref|ZP_00240486.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Bacillus
cereus G9241]
gi|49183115|ref|YP_026367.1| negative regulator of genetic competence ClpC/MecB [Bacillus
anthracis str. Sterne]
gi|49481552|ref|YP_034434.1| negative regulator of genetic competence clpC/mecB (ATP-dependent
Clp protease) [Bacillus thuringiensis serovar konkukian
str. 97-27]
gi|65317542|ref|ZP_00390501.1| COG0542: ATPases with chaperone activity, ATP-binding subunit
[Bacillus anthracis str. A2012]
gi|118475852|ref|YP_893003.1| negative regulator of genetic competence clpC/mecB [Bacillus
thuringiensis str. Al Hakam]
gi|165873139|ref|ZP_02217755.1| negative regulator of genetic competence ClpC/MecB [Bacillus
anthracis str. A0488]
gi|167635098|ref|ZP_02393415.1| negative regulator of genetic competence ClpC/MecB [Bacillus
anthracis str. A0442]
gi|167641960|ref|ZP_02400195.1| negative regulator of genetic competence ClpC/MecB [Bacillus
anthracis str. A0193]
gi|170689571|ref|ZP_02880757.1| negative regulator of genetic competence ClpC/MecB [Bacillus
anthracis str. A0465]
gi|170707575|ref|ZP_02898028.1| negative regulator of genetic competence ClpC/MecB [Bacillus
anthracis str. A0389]
gi|177655585|ref|ZP_02936966.1| negative regulator of genetic competence ClpC/MecB [Bacillus
anthracis str. A0174]
gi|190568958|ref|ZP_03021859.1| negative regulator of genetic competence ClpC/MecB [Bacillus
anthracis str. Tsiankovskii-I]
gi|196036353|ref|ZP_03103750.1| negative regulator of genetic competence ClpC/MecB [Bacillus cereus
W]
gi|196041747|ref|ZP_03109037.1| negative regulator of genetic competence ClpC/MecB [Bacillus cereus
NVH0597-99]
gi|196047734|ref|ZP_03114935.1| negative regulator of genetic competence ClpC/MecB [Bacillus cereus
03BB108]
gi|206978371|ref|ZP_03239244.1| negative regulator of genetic competence ClpC/MecB [Bacillus cereus
H3081.97]
gi|217957658|ref|YP_002336200.1| negative regulator of genetic competence ClpC/MecB [Bacillus cereus
AH187]
gi|218901283|ref|YP_002449117.1| negative regulator of genetic competence ClpC/MecB [Bacillus cereus
AH820]
gi|222093852|ref|YP_002527902.1| negative regulator of genetic competence clpc/mecb (ATP-dependent
clp protease) [Bacillus cereus Q1]
gi|225862134|ref|YP_002747512.1| negative regulator of genetic competence ClpC/MecB [Bacillus cereus
03BB102]
gi|227812755|ref|YP_002812764.1| negative regulator of genetic competence ClpC/MecB [Bacillus
anthracis str. CDC 684]
gi|228925335|ref|ZP_04088431.1| Negative regulator of genetic competence [Bacillus thuringiensis
serovar pondicheriensis BGSC 4BA1]
gi|228931584|ref|ZP_04094490.1| Negative regulator of genetic competence [Bacillus thuringiensis
serovar andalousiensis BGSC 4AW1]
gi|228943888|ref|ZP_04106273.1| Negative regulator of genetic competence [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
gi|228983337|ref|ZP_04143550.1| Negative regulator of genetic competence [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
gi|229089213|ref|ZP_04220494.1| Negative regulator of genetic competence [Bacillus cereus Rock3-42]
gi|229119744|ref|ZP_04249005.1| Negative regulator of genetic competence [Bacillus cereus 95/8201]
gi|229136928|ref|ZP_04265555.1| Negative regulator of genetic competence [Bacillus cereus
BDRD-ST26]
gi|229153860|ref|ZP_04281990.1| Negative regulator of genetic competence [Bacillus cereus ATCC
4342]
gi|229182476|ref|ZP_04309727.1| Negative regulator of genetic competence [Bacillus cereus BGSC 6E1]
gi|229194472|ref|ZP_04321275.1| Negative regulator of genetic competence [Bacillus cereus m1293]
gi|229601409|ref|YP_002864733.1| negative regulator of genetic competence ClpC/MecB [Bacillus
anthracis str. A0248]
gi|254684415|ref|ZP_05148275.1| negative regulator of genetic competence ClpC/MecB [Bacillus
anthracis str. CNEVA-9066]
gi|254724222|ref|ZP_05186007.1| negative regulator of genetic competence ClpC/MecB [Bacillus
anthracis str. A1055]
gi|254733764|ref|ZP_05191479.1| negative regulator of genetic competence ClpC/MecB [Bacillus
anthracis str. Western North America USA6153]
gi|254744615|ref|ZP_05202294.1| negative regulator of genetic competence ClpC/MecB [Bacillus
anthracis str. Kruger B]
gi|254756320|ref|ZP_05208349.1| negative regulator of genetic competence ClpC/MecB [Bacillus
anthracis str. Vollum]
gi|254758398|ref|ZP_05210425.1| negative regulator of genetic competence ClpC/MecB [Bacillus
anthracis str. Australia 94]
gi|300119607|ref|ZP_07057151.1| negative regulator of genetic competence ClpC/MecB [Bacillus cereus
SJ1]
gi|301051819|ref|YP_003790030.1| negative regulator of genetic competence clpC/mecB [Bacillus cereus
biovar anthracis str. CI]
gi|375282179|ref|YP_005102614.1| negative regulator of genetic competence ClpC/MecB [Bacillus cereus
NC7401]
gi|376264109|ref|YP_005116821.1| ATP-dependent Clp protease, ATP-binding subunit ClpC / Negative
regulator of genetic competence clcC/mecB [Bacillus
cereus F837/76]
gi|386733948|ref|YP_006207129.1| Negative regulator of genetic competence clpC/mecB [Bacillus
anthracis str. H9401]
gi|402554332|ref|YP_006595603.1| Negative regulator of genetic competence clpC/mecB [Bacillus cereus
FRI-35]
gi|421510407|ref|ZP_15957300.1| Negative regulator of genetic competence clpC/mecB [Bacillus
anthracis str. UR-1]
gi|421640496|ref|ZP_16081078.1| Negative regulator of genetic competence clpC/mecB [Bacillus
anthracis str. BF1]
gi|423357627|ref|ZP_17335222.1| chaperone ClpB [Bacillus cereus IS075]
gi|423376326|ref|ZP_17353640.1| chaperone ClpB [Bacillus cereus AND1407]
gi|423553984|ref|ZP_17530311.1| chaperone ClpB [Bacillus cereus ISP3191]
gi|423572073|ref|ZP_17548287.1| chaperone ClpB [Bacillus cereus MSX-A12]
gi|423578066|ref|ZP_17554185.1| chaperone ClpB [Bacillus cereus MSX-D12]
gi|423608093|ref|ZP_17583986.1| chaperone ClpB [Bacillus cereus VD102]
gi|30253593|gb|AAP24135.1| negative regulator of genetic competence ClpC/MecB [Bacillus
anthracis str. Ames]
gi|42735077|gb|AAS39017.1| negative regulator of genetic competence ClpC/MecB [Bacillus cereus
ATCC 10987]
gi|47500484|gb|AAT29160.1| negative regulator of genetic competence ClpC/MecB [Bacillus
anthracis str. 'Ames Ancestor']
gi|47553509|gb|EAL11890.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Bacillus
cereus G9241]
gi|49177042|gb|AAT52418.1| negative regulator of genetic competence ClpC/MecB [Bacillus
anthracis str. Sterne]
gi|49333108|gb|AAT63754.1| negative regulator of genetic competence clpC/mecB (ATP-dependent
Clp protease) [Bacillus thuringiensis serovar konkukian
str. 97-27]
gi|118415077|gb|ABK83496.1| negative regulator of genetic competence clpC/mecB [Bacillus
thuringiensis str. Al Hakam]
gi|164711119|gb|EDR16680.1| negative regulator of genetic competence ClpC/MecB [Bacillus
anthracis str. A0488]
gi|167510091|gb|EDR85502.1| negative regulator of genetic competence ClpC/MecB [Bacillus
anthracis str. A0193]
gi|167529572|gb|EDR92322.1| negative regulator of genetic competence ClpC/MecB [Bacillus
anthracis str. A0442]
gi|170127571|gb|EDS96445.1| negative regulator of genetic competence ClpC/MecB [Bacillus
anthracis str. A0389]
gi|170666484|gb|EDT17261.1| negative regulator of genetic competence ClpC/MecB [Bacillus
anthracis str. A0465]
gi|172080049|gb|EDT65147.1| negative regulator of genetic competence ClpC/MecB [Bacillus
anthracis str. A0174]
gi|190559882|gb|EDV13866.1| negative regulator of genetic competence ClpC/MecB [Bacillus
anthracis str. Tsiankovskii-I]
gi|195990983|gb|EDX54954.1| negative regulator of genetic competence ClpC/MecB [Bacillus cereus
W]
gi|196021437|gb|EDX60143.1| negative regulator of genetic competence ClpC/MecB [Bacillus cereus
03BB108]
gi|196027367|gb|EDX65984.1| negative regulator of genetic competence ClpC/MecB [Bacillus cereus
NVH0597-99]
gi|206743432|gb|EDZ54866.1| negative regulator of genetic competence ClpC/MecB [Bacillus cereus
H3081.97]
gi|217064980|gb|ACJ79230.1| negative regulator of genetic competence ClpC/MecB [Bacillus cereus
AH187]
gi|218540030|gb|ACK92428.1| negative regulator of genetic competence ClpC/MecB [Bacillus cereus
AH820]
gi|221237900|gb|ACM10610.1| negative regulator of genetic competence clpC/mecB (ATP-dependent
Clp protease) [Bacillus cereus Q1]
gi|225787223|gb|ACO27440.1| negative regulator of genetic competence ClpC/MecB [Bacillus cereus
03BB102]
gi|227007271|gb|ACP17014.1| negative regulator of genetic competence ClpC/MecB [Bacillus
anthracis str. CDC 684]
gi|228588938|gb|EEK46953.1| Negative regulator of genetic competence [Bacillus cereus m1293]
gi|228600931|gb|EEK58500.1| Negative regulator of genetic competence [Bacillus cereus BGSC 6E1]
gi|228629541|gb|EEK86238.1| Negative regulator of genetic competence [Bacillus cereus ATCC
4342]
gi|228646466|gb|EEL02673.1| Negative regulator of genetic competence [Bacillus cereus
BDRD-ST26]
gi|228663645|gb|EEL19224.1| Negative regulator of genetic competence [Bacillus cereus 95/8201]
gi|228694052|gb|EEL47734.1| Negative regulator of genetic competence [Bacillus cereus Rock3-42]
gi|228776327|gb|EEM24680.1| Negative regulator of genetic competence [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
gi|228815721|gb|EEM61957.1| Negative regulator of genetic competence [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
gi|228828012|gb|EEM73740.1| Negative regulator of genetic competence [Bacillus thuringiensis
serovar andalousiensis BGSC 4AW1]
gi|228834257|gb|EEM79798.1| Negative regulator of genetic competence [Bacillus thuringiensis
serovar pondicheriensis BGSC 4BA1]
gi|229265817|gb|ACQ47454.1| negative regulator of genetic competence ClpC/MecB [Bacillus
anthracis str. A0248]
gi|298723079|gb|EFI63977.1| negative regulator of genetic competence ClpC/MecB [Bacillus cereus
SJ1]
gi|300373988|gb|ADK02892.1| negative regulator of genetic competence clpC/mecB [Bacillus cereus
biovar anthracis str. CI]
gi|358350702|dbj|BAL15874.1| negative regulator of genetic competence ClpC/MecB [Bacillus cereus
NC7401]
gi|364509909|gb|AEW53308.1| ATP-dependent Clp protease, ATP-binding subunit ClpC / Negative
regulator of genetic competence clcC/mecB [Bacillus
cereus F837/76]
gi|384383800|gb|AFH81461.1| Negative regulator of genetic competence clpC/mecB [Bacillus
anthracis str. H9401]
gi|401074493|gb|EJP82893.1| chaperone ClpB [Bacillus cereus IS075]
gi|401088783|gb|EJP96965.1| chaperone ClpB [Bacillus cereus AND1407]
gi|401182191|gb|EJQ89330.1| chaperone ClpB [Bacillus cereus ISP3191]
gi|401198795|gb|EJR05708.1| chaperone ClpB [Bacillus cereus MSX-A12]
gi|401203646|gb|EJR10482.1| chaperone ClpB [Bacillus cereus MSX-D12]
gi|401238776|gb|EJR45209.1| chaperone ClpB [Bacillus cereus VD102]
gi|401795542|gb|AFQ09401.1| Negative regulator of genetic competence clpC/mecB [Bacillus cereus
FRI-35]
gi|401819489|gb|EJT18666.1| Negative regulator of genetic competence clpC/mecB [Bacillus
anthracis str. UR-1]
gi|403392312|gb|EJY89566.1| Negative regulator of genetic competence clpC/mecB [Bacillus
anthracis str. BF1]
Length = 811
Score = 793 bits (2048), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/669 (59%), Positives = 520/669 (77%), Gaps = 9/669 (1%)
Query: 5 STEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKN 64
S EA GG S+ PTL+ +LT +A E +LDPV+GR +I+RV+++L RRTKN
Sbjct: 144 SNEASSGHQGGSSTNANTPTLDSLARDLTVVARENRLDPVIGRGKEIQRVIEVLSRRTKN 203
Query: 65 NPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLK 124
NP LIGEPGVGKTAIAEGLAQ+I + +VP+T+ K+V+TLDMG +VAGTKYRGEFE+RLK
Sbjct: 204 NPVLIGEPGVGKTAIAEGLAQQIVNNEVPETLRDKRVMTLDMGTVVAGTKYRGEFEDRLK 263
Query: 125 KLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRK 184
K+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTLDEYRK
Sbjct: 264 KVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEYRK 323
Query: 185 HIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYI 244
+IEKD ALERRFQP+ V EPS+DE+ QILKGLR+RYE HH++ TD+A+ +A +LS +YI
Sbjct: 324 YIEKDAALERRFQPIHVDEPSLDESTQILKGLRDRYEAHHRVSITDDAIDAAVKLSDRYI 383
Query: 245 SDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGEL 304
+DRFLPDKAIDLIDEA S+VRLR P +ELE +L +I KEK+ AV+ Q+FEKA L
Sbjct: 384 TDRFLPDKAIDLIDEAASKVRLRSYTTPPNLKELEVKLEEIRKEKDAAVQSQEFEKAASL 443
Query: 305 RDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDES 364
RD E L+ ++ + KE E VT DI ++VS WT IPV K++ E+
Sbjct: 444 RDMEQRLREKLEDTKRQWKEQQGKENSE------VTVEDIANVVSTWTRIPVSKLAQTET 497
Query: 365 DRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAK 424
D+LL +E LH RVIGQDEAV A+++A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+
Sbjct: 498 DKLLNLESILHDRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELAR 557
Query: 425 ALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLF 484
ALA FG E+AMIR+DMSE+ME+H+ S+L+GSPPGYVGY EGGQLTE VRR+PY+VVL
Sbjct: 558 ALAESMFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPYSVVLL 617
Query: 485 DEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDL 544
DE+EKAHPDVFN++LQ+LEDGRLTDSKGRTVDF+NT++IMTSNVG+ +++ + +GF++
Sbjct: 618 DEVEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTIVIMTSNVGAEALKR-NKHLGFNV 676
Query: 545 DYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDR 604
+ +D Y+ +K V +ELK+ FRPEFLNR+DE+IVF L K ++EI +M+ ++ +R
Sbjct: 677 QDESRD--YSDMKGKVMDELKKAFRPEFLNRIDEIIVFHMLEKKHIQEIVTLMVNQLVNR 734
Query: 605 LKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVI 664
LK ++IEL +TE + ++G++ YGARPLRRAI + +ED ++E++L I++G VI
Sbjct: 735 LKEQEIELHLTEGAISAIADKGFDREYGARPLRRAIQKHVEDRLSEELLKGAIEKGQKVI 794
Query: 665 VDVDSDGNV 673
DV+ + V
Sbjct: 795 FDVEGESFV 803
>gi|321313756|ref|YP_004206043.1| class III stress response-related ATPase, AAA+ superfamily protein
[Bacillus subtilis BSn5]
gi|320020030|gb|ADV95016.1| class III stress response-related ATPase, AAA+ superfamily protein
[Bacillus subtilis BSn5]
Length = 810
Score = 793 bits (2048), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/667 (59%), Positives = 520/667 (77%), Gaps = 10/667 (1%)
Query: 9 VGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCL 68
G+ G +S PTL+ +LT +A+E LDPV+GR +I+RV+++L RRTKNNP L
Sbjct: 147 TGSSAAGTNSNANTPTLDSLARDLTAIAKEDSLDPVIGRSKEIQRVIEVLSRRTKNNPVL 206
Query: 69 IGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLME 128
IGEPGVGKTA+AEGLAQ+I + +VP+ + K+V+TLDMG +VAGTKYRGEFE+RLKK+M+
Sbjct: 207 IGEPGVGKTAVAEGLAQQIINNEVPEILRDKRVMTLDMGTVVAGTKYRGEFEDRLKKVMD 266
Query: 129 EIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEK 188
EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTLDEYRK+IEK
Sbjct: 267 EIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEYRKYIEK 326
Query: 189 DPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRF 248
D ALERRFQP++V +PSVDE+IQIL+GLR+RYE HH++ TD+A+ +A +LS +YISDRF
Sbjct: 327 DAALERRFQPIQVDQPSVDESIQILQGLRDRYEAHHRVSITDDAIEAAVKLSDRYISDRF 386
Query: 249 LPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDRE 308
LPDKAIDLIDEAGS+VRLR P +ELE++L ++ KEK+ AV+ Q+FEKA LRD E
Sbjct: 387 LPDKAIDLIDEAGSKVRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFEKAASLRDTE 446
Query: 309 MDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLL 368
L+ Q+ KE + G VT DI +VS+WTG+PV K++ E+D+LL
Sbjct: 447 QRLREQVEDTKKSWKE------KQGQENSEVTVDDIAMVVSSWTGVPVSKIAQTETDKLL 500
Query: 369 KMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAA 428
ME LH RVIGQDEAV A+++A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+ALA
Sbjct: 501 NMENILHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAE 560
Query: 429 YYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIE 488
FG EE+MIR+DMSE+ME+H+ S+L+GSPPGYVGY EGGQLTE VRR+PY+VVL DEIE
Sbjct: 561 SIFGDEESMIRIDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPYSVVLLDEIE 620
Query: 489 KAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDE 548
KAHPDVFN++LQ+LEDGRLTDSKGRTVDF+NT+LIMTSNVG+S +++ + +GF++ +
Sbjct: 621 KAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTILIMTSNVGASELKR-NKYVGFNV--QD 677
Query: 549 KDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTK 608
+ ++ +K V ELK+ FRPEF+NR+DE+IVF L K + EI +M ++ RLK +
Sbjct: 678 ETQNHKDMKDKVMGELKRAFRPEFINRIDEIIVFHSLEKKHLTEIVSLMSDQLTKRLKEQ 737
Query: 609 DIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVD 668
D+ +++T+ + +V EEG + YGARPLRRAI + +ED ++E++L I +G +++DV+
Sbjct: 738 DLSIELTDAAKAKVAEEGVDLEYGARPLRRAIQKHVEDRLSEELLRGNIHKGQHIVLDVE 797
Query: 669 SDGNVTV 675
DG V
Sbjct: 798 -DGEFVV 803
>gi|385267113|ref|ZP_10045200.1| ATPase AAA-2 domain-containing protein [Bacillus sp. 5B6]
gi|385151609|gb|EIF15546.1| ATPase AAA-2 domain-containing protein [Bacillus sp. 5B6]
Length = 811
Score = 793 bits (2048), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/669 (59%), Positives = 519/669 (77%), Gaps = 14/669 (2%)
Query: 9 VGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCL 68
G+ G +S PTL+ +LT +A+E LDPV+GR +I+RV+++L RRTKNNP L
Sbjct: 148 TGSSASGTNSNANTPTLDSLARDLTAIAKEDSLDPVIGRSKEIQRVIEVLSRRTKNNPVL 207
Query: 69 IGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLME 128
IGEPGVGKTAIAEGLAQ+I + +VP+ + K+V+TLDMG +VAGTKYRGEFE+RLKK+M+
Sbjct: 208 IGEPGVGKTAIAEGLAQQIINNEVPEILRDKRVMTLDMGTVVAGTKYRGEFEDRLKKVMD 267
Query: 129 EIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEK 188
EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTLDEYRK+IEK
Sbjct: 268 EIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEYRKYIEK 327
Query: 189 DPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRF 248
D ALERRFQP++V +PS DE+IQILKGLR+RYE HH++ TDEA+ +A +LS +YISDRF
Sbjct: 328 DAALERRFQPIQVDQPSADESIQILKGLRDRYEAHHRVSITDEAIEAAVKLSDRYISDRF 387
Query: 249 LPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDRE 308
LPDKAIDLIDEAGS+VRLR P +ELE++L ++ KEK+ AV+ Q+FEKA LRD E
Sbjct: 388 LPDKAIDLIDEAGSKVRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFEKAASLRDTE 447
Query: 309 MDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLL 368
L+ Q+ KE + G V+ DI +VS+WTG+PV K++ E+D+LL
Sbjct: 448 QRLREQVEDTKKTWKE------KQGQENSEVSVEDIAMVVSSWTGVPVSKIAQTETDKLL 501
Query: 369 KMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAA 428
ME LH RVIGQDEAV A+++A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+ALA
Sbjct: 502 NMENILHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAE 561
Query: 429 YYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIE 488
FG EEAMIR+DMSE+ME+H+ S+L+GSPPGYVGY EGGQLTE VRR+PY+VVL DEIE
Sbjct: 562 SIFGDEEAMIRVDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPYSVVLLDEIE 621
Query: 489 KAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDE 548
KAHPDVFN++LQ+LEDGRLTDSKGRTVDF+NT+LIMTSNVG+S +++ + +GF++
Sbjct: 622 KAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTILIMTSNVGASELKR-NKYVGFNV---- 676
Query: 549 KDSSYNR--IKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLK 606
+D S N +K V ELK+ FRPEF+NR+DE+IVF L K + +I +M ++ RLK
Sbjct: 677 QDESQNHKDMKDKVMGELKRAFRPEFINRIDEIIVFHSLEKKHLTDIVSLMSDQLTKRLK 736
Query: 607 TKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVD 666
+D+ +++T+ + +V EEG + YGARPLRRAI + +ED ++E++L I +G +++D
Sbjct: 737 EQDLSIELTDAAKAKVAEEGVDLEYGARPLRRAIQKHVEDRLSEELLRGNIDKGQHIVLD 796
Query: 667 VDSDGNVTV 675
V+ DG V
Sbjct: 797 VE-DGEFVV 804
>gi|377574374|ref|ZP_09803404.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Mobilicoccus
pelagius NBRC 104925]
gi|377536930|dbj|GAB48569.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Mobilicoccus
pelagius NBRC 104925]
Length = 880
Score = 793 bits (2048), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/694 (57%), Positives = 532/694 (76%), Gaps = 21/694 (3%)
Query: 7 EAVGAGVGGGS-SGNKMPT----LEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRR 61
E AGVGG S SG P L+++G NLT+ A EGKLDPV+GR +IERV+Q+L RR
Sbjct: 150 ETAAAGVGGQSTSGEGTPAGSLVLDQFGRNLTQAAREGKLDPVIGRAQEIERVMQVLSRR 209
Query: 62 TKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEE 121
TKNNP LIGEPGVGKTA+ EGLAQ I G+VP+T++ K + TLD+G LVAG++YRG+FEE
Sbjct: 210 TKNNPILIGEPGVGKTAVVEGLAQDIVKGEVPETLKDKHIYTLDLGALVAGSRYRGDFEE 269
Query: 122 RLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDE 181
RLKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDE
Sbjct: 270 RLKKVLKEIRTRGDIILFIDEIHTLVGAGAAEGAIDAASILKPMLARGELQTIGATTLDE 329
Query: 182 YRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSY 241
YRKHIEKDPALERRFQP++V EP++ I+ILKGLR+RYE HH++ TD ALV+AA ++
Sbjct: 330 YRKHIEKDPALERRFQPIQVAEPTLSHAIEILKGLRDRYEAHHRVSITDGALVAAANMAD 389
Query: 242 QYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKA 301
+YI+DR+LPDKAIDLIDEAG+R+R++ P + RE ++++ + +EK A+ GQDFEKA
Sbjct: 390 RYINDRYLPDKAIDLIDEAGARLRIKRMTAPPDLREFDEKIAHVRREKEAAIDGQDFEKA 449
Query: 302 GELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEK 358
+LRD E L + K + E +AGD+ VV EV+ I +++A TGIPV K
Sbjct: 450 AKLRDDEKQLI--------EAKNTREKEWKAGDM-DVVAEVNEDLIAEVLAASTGIPVFK 500
Query: 359 VSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVG 418
++ +ES RLL ME+ LHKR++G D+A+KA+S+AIRR R GLK+P RP SFIF+GPTGVG
Sbjct: 501 LTEEESTRLLNMEDELHKRIVGNDDAIKALSQAIRRTRAGLKDPRRPGGSFIFAGPTGVG 560
Query: 419 KSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRP 478
K+ELAKALA + FG E+A+I LDMSEF E+HTVS+L GSPPGYVGY EGGQLTE VRR+P
Sbjct: 561 KTELAKALAEFLFGDEDALITLDMSEFAEKHTVSRLFGSPPGYVGYEEGGQLTEKVRRKP 620
Query: 479 YTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR 538
++VVLFDE+EKAH D+FN +LQILEDGRLTD++GR VDFKNT++IMT+N+G+ I K
Sbjct: 621 FSVVLFDEVEKAHADIFNSLLQILEDGRLTDAQGRVVDFKNTVIIMTTNLGTRDISK-SV 679
Query: 539 RIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIML 598
+GF D ++ S+Y R+K+ V +ELKQ+FRPEFLNR+D+++VF QL++ E+ +I D+M+
Sbjct: 680 SLGFAPDGNQG-SNYERMKNKVQDELKQHFRPEFLNRVDDIVVFPQLSEDEIVQIVDLMV 738
Query: 599 KEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIK 658
+ +RLK KD+ +++T ++ + + GY+P GARPLRRAI R +ED ++EK+L EI
Sbjct: 739 GRLDERLKDKDMGVELTPAAKKLLAKRGYDPVLGARPLRRAIQRDIEDMLSEKILYGEIG 798
Query: 659 EGDSVIVDVDSDGNVTVLNGSSGAPESLAD-PLP 691
G+ V VDV+ +G+ G + D PLP
Sbjct: 799 SGELVSVDVEGEGDSATFT-FQGTKKDFGDAPLP 831
>gi|228989289|ref|ZP_04149281.1| Negative regulator of genetic competence [Bacillus pseudomycoides
DSM 12442]
gi|228770442|gb|EEM19014.1| Negative regulator of genetic competence [Bacillus pseudomycoides
DSM 12442]
Length = 811
Score = 793 bits (2048), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/669 (59%), Positives = 523/669 (78%), Gaps = 9/669 (1%)
Query: 5 STEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKN 64
S EA GG S+ PTL+ +LT +A EG+LDPV+GR +I+RV+++L RRTKN
Sbjct: 144 SNEATSGHQGGASANANTPTLDSLARDLTVVAREGRLDPVIGRSKEIQRVIEVLSRRTKN 203
Query: 65 NPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLK 124
NP LIGEPGVGKTAIAEGLAQ+I + +VP+T+ K+V+TLDMG +VAGTKYRGEFE+RLK
Sbjct: 204 NPVLIGEPGVGKTAIAEGLAQQIVNNEVPETLRDKRVMTLDMGTVVAGTKYRGEFEDRLK 263
Query: 125 KLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRK 184
K+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTLDEYRK
Sbjct: 264 KVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEYRK 323
Query: 185 HIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYI 244
+IEKD ALERRFQP+ V EPS++E+IQIL+GLR+RYE HH++ TD+A+ +A +LS +YI
Sbjct: 324 YIEKDAALERRFQPIHVDEPSLEESIQILRGLRDRYEAHHRVSITDDAIEAAVKLSDRYI 383
Query: 245 SDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGEL 304
+DRFLPDKAIDLIDEA S+VRLR P + +ELE +L +I KEK+ AV+ Q+FEKA L
Sbjct: 384 TDRFLPDKAIDLIDEAASKVRLRSYTTPPDLKELEVKLEEIRKEKDAAVQSQEFEKAASL 443
Query: 305 RDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDES 364
RD E L+ ++ + KE E VT DI ++VS WT IPV K++ E+
Sbjct: 444 RDMEQRLREKLEDTKRQWKEQQGKENSE------VTVEDIANVVSTWTRIPVSKLAQTET 497
Query: 365 DRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAK 424
++LL +E LH RVIGQDEAV A+++A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+
Sbjct: 498 NKLLNLESILHDRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELAR 557
Query: 425 ALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLF 484
ALA FG E+AMIR+DMSE+ME+H+ S+L+GSPPGYVGY EGGQLTE VRR+PY+VVL
Sbjct: 558 ALAESMFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPYSVVLL 617
Query: 485 DEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDL 544
DE+EKAHPDVFN++LQ+LEDGRLTDSKGRTVDF+NT++IMTSNVG+ +++ + +GF++
Sbjct: 618 DEVEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTIVIMTSNVGAEALKR-NKHLGFNV 676
Query: 545 DYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDR 604
+ +D Y+ +K V +ELK+ FRPEFLNR+DE+IVF L K ++EI +M+ ++ +R
Sbjct: 677 QDESRD--YSDMKGKVMDELKKAFRPEFLNRIDEIIVFHMLEKKHIQEIVTLMVNQLVNR 734
Query: 605 LKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVI 664
LK ++IEL++T E + ++G++ YGARPLRRAI + +ED ++E++L I++G V+
Sbjct: 735 LKEQEIELELTSTAIEAIADKGFDREYGARPLRRAIQKHVEDRLSEELLKGAIEKGQKVV 794
Query: 665 VDVDSDGNV 673
D + + V
Sbjct: 795 FDAEGESFV 803
>gi|299830628|ref|YP_003735076.1| ATP-dependent clp protease ATP-binding subunit [Durinskia baltica]
gi|297384992|gb|ADI40291.1| ATP-dependent clp protease ATP-binding subunit [Durinskia baltica]
Length = 911
Score = 793 bits (2048), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/673 (57%), Positives = 511/673 (75%), Gaps = 33/673 (4%)
Query: 19 GNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTA 78
G+ PTL+EY N+TK A +G LDPV+GR+ +I+ V+ +L RRTKNNP LIGEPGVGKTA
Sbjct: 167 GSPTPTLDEYAENITKEAIDGNLDPVIGREKEIDDVIAVLARRTKNNPVLIGEPGVGKTA 226
Query: 79 IAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIIL 138
+AEGLAQ I + VPD ++G ++ LD+G ++AGTKYRGEFEERLK+++EE + +I+
Sbjct: 227 VAEGLAQLILTEKVPDFLDGSLIMALDLGSILAGTKYRGEFEERLKRIVEEAQNDSAVII 286
Query: 139 FIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQP 198
IDE+HTL+GAGAAEGA+DAANILKP+LARG+ +CIGATT DEYRK+IE+DPALERRFQP
Sbjct: 287 VIDEIHTLVGAGAAEGAVDAANILKPALARGKFRCIGATTNDEYRKYIERDPALERRFQP 346
Query: 199 VKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLID 258
V V EPSV TI+IL+GLR ++E HH L Y D+AL AA LS +Y++DR+LPDKAID++D
Sbjct: 347 VHVEEPSVGTTIEILRGLRSKFEQHHTLSYHDKALEQAAILSDKYVADRYLPDKAIDVLD 406
Query: 259 EAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQI--- 315
EAG+RVRL + +LP R L EL++ K+K E ++ DFE A +L D EM+++ I
Sbjct: 407 EAGARVRLENRRLPLGLRSLMHELQETIKDKEECIKEHDFEAAKQLLDHEMEVRTHIRIM 466
Query: 316 --SALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEET 373
SAL ++ + S+ + + +VTE D+ ++S WTGIPV K++ ES+RLLKME+T
Sbjct: 467 KQSALTNEARGFSRRDVD------MVTETDVSDVISNWTGIPVTKITGSESERLLKMEDT 520
Query: 374 LHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGS 433
+H+R+IGQ AV A+S+AIRRARVGL+NPNRPIASFIF+GPTGVGK+EL KAL+ Y F S
Sbjct: 521 IHERIIGQKHAVVAVSKAIRRARVGLRNPNRPIASFIFAGPTGVGKTELTKALSDYMFSS 580
Query: 434 EEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPD 493
E++MIRLDMSE+ME+HTV+KLIGSPPGYVGY EGGQLTEAVR +PY+VVL DE+EKAHPD
Sbjct: 581 EDSMIRLDMSEYMEKHTVAKLIGSPPGYVGYNEGGQLTEAVRSKPYSVVLLDEVEKAHPD 640
Query: 494 VFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEK---------GGRRIGFDL 544
VFN++LQIL+DGRLTDSKGR +DF NTL+IMT+N+G+ +IE+ G R GF +
Sbjct: 641 VFNLLLQILDDGRLTDSKGRVIDFTNTLIIMTTNLGAKIIERESGIKSKSDQGER-GFKI 699
Query: 545 DYDE-----------KDSS-YNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKE 592
D KD + R+ LV EELK +FRPEFLNR+DE+IVF LT++++ E
Sbjct: 700 TPDAVLGWEPVPEPIKDPELFERVSKLVNEELKNFFRPEFLNRIDEIIVFNHLTRIDIWE 759
Query: 593 IADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKM 652
I ++ +K V RLK K I L V + + +EGY+P YGARPLRRAIM+ LED++AE+
Sbjct: 760 ICELQIKSVQKRLKEKGINLIVDLAVQAFLTDEGYDPIYGARPLRRAIMKYLEDTLAEQC 819
Query: 653 LAREIKEGDSVIV 665
L++ + +IV
Sbjct: 820 LSKTLYPNTKIIV 832
>gi|404416854|ref|ZP_10998667.1| stress response-related Clp ATPase [Staphylococcus arlettae CVD059]
gi|403490742|gb|EJY96274.1| stress response-related Clp ATPase [Staphylococcus arlettae CVD059]
Length = 824
Score = 793 bits (2047), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/654 (58%), Positives = 505/654 (77%), Gaps = 10/654 (1%)
Query: 16 GSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRT-KNNPCLIGEPGV 74
+ N PTL+ +LT +A++G LDPV+GR +I RV+++L RRT KNNP LIGEPGV
Sbjct: 154 ANKSNNTPTLDSLARDLTVIAKDGTLDPVIGRDQEITRVIEVLSRRTTKNNPVLIGEPGV 213
Query: 75 GKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSD 134
GKTAIAEGLAQ I + +VP+T++ K+V++LDMG +VAGTKYRGEFEERLKK+MEEI Q+
Sbjct: 214 GKTAIAEGLAQAIVNNEVPETLKNKRVMSLDMGTVVAGTKYRGEFEERLKKVMEEIHQAG 273
Query: 135 EIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALER 194
++LFIDE+HTL+GAG AEGAIDA+NILKP+LARGELQCIGATTLDEYRK+IEKD ALER
Sbjct: 274 NVVLFIDELHTLVGAGGAEGAIDASNILKPALARGELQCIGATTLDEYRKNIEKDAALER 333
Query: 195 RFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAI 254
RFQPV+V EP+V++T++ILKGLR+RYE HH++ +D+A+ +A QLS +Y+SDRFLPDKAI
Sbjct: 334 RFQPVQVDEPTVEDTVEILKGLRDRYEAHHRINISDQAVEAAVQLSNRYVSDRFLPDKAI 393
Query: 255 DLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQ 314
DLIDEA S+VRL+ P +E+E+ + Q+ EK+ AV Q+FE A LRD++ L+ Q
Sbjct: 394 DLIDEASSKVRLKSHTTPPNLKEIEQHIEQVKNEKDAAVHAQEFENAANLRDKQTKLEKQ 453
Query: 315 ISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETL 374
+ K E A ++E DI +++ WTGIP+ K++ ES RLL +E+TL
Sbjct: 454 YEEATNNWKNAQNGENTA------LSEEDIAEVIAGWTGIPLTKINETESQRLLNLEDTL 507
Query: 375 HKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSE 434
H RVIGQ EAV +IS+A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+ALA FG E
Sbjct: 508 HDRVIGQKEAVNSISKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGEE 567
Query: 435 EAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDV 494
+AMIR+DMSEFME+H VS+L+G+PPGYVG+ +GGQLTE VRR+PY+V+LFDEIEKAHPDV
Sbjct: 568 DAMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKVRRKPYSVILFDEIEKAHPDV 627
Query: 495 FNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYN 554
FN++LQ+L+DG LTD+KGR VDF+NT++IMTSNVG+ ++ + GF E+ Y
Sbjct: 628 FNILLQVLDDGHLTDTKGRRVDFRNTVIIMTSNVGAQELQD-QKFAGF--GGAEEGQDYE 684
Query: 555 RIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQV 614
I+ + +ELK FRPEFLNR+D++IVF +L K E+KEI +M+ ++ +RL +DI + V
Sbjct: 685 TIRKTMLKELKNAFRPEFLNRVDDIIVFHKLDKDELKEIVTMMVNKLTERLSEQDISISV 744
Query: 615 TERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVD 668
T+ +E++ EEGY+P YGARPL RAI + +ED+++E +L EG V++D D
Sbjct: 745 TDTAKEKIAEEGYDPEYGARPLIRAIQKTVEDNLSELILDGNKIEGKDVVIDHD 798
>gi|403388307|ref|ZP_10930364.1| negative regulator of genetic competence mecB/clpC [Clostridium sp.
JC122]
Length = 809
Score = 793 bits (2047), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/648 (58%), Positives = 517/648 (79%), Gaps = 7/648 (1%)
Query: 24 TLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGL 83
TL++YG ++T LA EGKLDP++GR + ERV++IL RR KNNPCLIG+PGVGKTAIAEGL
Sbjct: 163 TLDKYGKDITDLAYEGKLDPIIGRDKETERVLEILCRRMKNNPCLIGDPGVGKTAIAEGL 222
Query: 84 AQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEV 143
AQ+IASG++P+ ++ K+V++LDM ++AG+KYRGEFEERL ++EE+ ++ +ILFIDE+
Sbjct: 223 AQKIASGNIPEILKEKRVVSLDMSSVLAGSKYRGEFEERLNNIIEEVAKAGNVILFIDEI 282
Query: 144 HTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPE 203
HT++GAG AEGAIDA+NILKP+LARGE+QCIGATTLDEYRK+IEKD ALERRFQ V V E
Sbjct: 283 HTIVGAGGAEGAIDASNILKPALARGEIQCIGATTLDEYRKYIEKDAALERRFQSVLVDE 342
Query: 204 PSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSR 263
P+ +E I+ILKGLR++YE HH+++ TDEA+ +A +LS +YI+DRFLPDKAIDLIDEAG++
Sbjct: 343 PTKEEAIEILKGLRDKYEAHHRVQITDEAIEAAVKLSDRYITDRFLPDKAIDLIDEAGAK 402
Query: 264 VRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGK 323
+R+ + P+ ++L+++L Q TKEK++A+ QDFEKA LRD+E +K +I
Sbjct: 403 MRIENLTTPKCLKDLQEKLEQATKEKSDAITMQDFEKAASLRDKEKSIKEEIEK------ 456
Query: 324 EMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDE 383
E + ++ D +V + +I+S WT IP+EK++ E+ RLLK+EE LH RVIGQDE
Sbjct: 457 EEKQWSSKKNDANSIVDASHVANIISRWTNIPIEKLTETEATRLLKLEEILHGRVIGQDE 516
Query: 384 AVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMS 443
AV++IS+A+RRARVGLK+P RPI SFIF GPTGVGK+EL KALA FG E +IR+DMS
Sbjct: 517 AVESISKAVRRARVGLKDPKRPIGSFIFLGPTGVGKTELTKALAQAMFGDENNLIRIDMS 576
Query: 444 EFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILE 503
E+ME+H+VSKLIG+PPGYVG+ EGGQLTE VRR PY+V+LFDEIEKAHPDVFN +LQILE
Sbjct: 577 EYMEKHSVSKLIGAPPGYVGFDEGGQLTEKVRRNPYSVILFDEIEKAHPDVFNALLQILE 636
Query: 504 DGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEE 563
DGRLTD KG+TV+FKNT++IMTSNVG+S I+K IGF + E + + ++K + E+
Sbjct: 637 DGRLTDGKGKTVNFKNTIIIMTSNVGASDIKKQN-TIGFAKNSLEASTGHEKMKENIMEK 695
Query: 564 LKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVV 623
LK FRPEFLNR+D++IVF +L + ++ +I ++ML + DRL+ ++I ++ + +E +
Sbjct: 696 LKLTFRPEFLNRIDDIIVFHKLNESDLLKIVELMLNVLSDRLQQQNINIKFSNEAKEFLA 755
Query: 624 EEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDG 671
+EG++P+YGARPLRRAI +++ED +AE++L + GDSVIV VD+D
Sbjct: 756 KEGFDPTYGARPLRRAITKIIEDKLAEEILKGNVNTGDSVIVTVDNDN 803
>gi|423645099|ref|ZP_17620715.1| chaperone ClpB [Bacillus cereus VD166]
gi|401267794|gb|EJR73850.1| chaperone ClpB [Bacillus cereus VD166]
Length = 811
Score = 792 bits (2046), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/666 (59%), Positives = 519/666 (77%), Gaps = 9/666 (1%)
Query: 5 STEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKN 64
S EA GG S+ PTL+ +LT +A E +LDPV+GR +I+RV+++L RRTKN
Sbjct: 144 SNEASSGHQGGSSTNANTPTLDSLARDLTVVAHENRLDPVIGRSKEIQRVIEVLSRRTKN 203
Query: 65 NPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLK 124
NP LIGEPGVGKTAIAEGLAQ+I + +VP+T+ K+V+TLDMG +VAGTKYRGEFE+RLK
Sbjct: 204 NPVLIGEPGVGKTAIAEGLAQQIVNNEVPETLRDKRVMTLDMGTVVAGTKYRGEFEDRLK 263
Query: 125 KLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRK 184
K+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTLDEYRK
Sbjct: 264 KVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEYRK 323
Query: 185 HIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYI 244
+IEKD ALERRFQP+ V EPS++E+ QILKGLR+RYE HH++ TD+A+ +A +LS +YI
Sbjct: 324 YIEKDAALERRFQPIHVDEPSLEESTQILKGLRDRYEAHHRVSITDDAIDAAVKLSDRYI 383
Query: 245 SDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGEL 304
+DRFLPDKAIDLIDEA S+VRLR P +ELE +L +I KEK+ AV+ Q+FEKA L
Sbjct: 384 TDRFLPDKAIDLIDEAASKVRLRSYTTPPNLKELEVKLEEIRKEKDAAVQSQEFEKAASL 443
Query: 305 RDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDES 364
RD E L+ ++ + KE E VT DI ++VS WT IPV K++ E+
Sbjct: 444 RDMEQRLREKLEDTKRQWKEQQGKENSE------VTVEDIANVVSTWTRIPVSKLAQTET 497
Query: 365 DRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAK 424
D+LL +E LH RVIGQDEAV A+++A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+
Sbjct: 498 DKLLNLESILHDRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELAR 557
Query: 425 ALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLF 484
ALA FG E+AMIR+DMSE+ME+H+ S+L+GSPPGYVGY EGGQLTE VRR+PY+VVL
Sbjct: 558 ALAESMFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPYSVVLL 617
Query: 485 DEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDL 544
DE+EKAHPDVFN++LQ+LEDGRLTDSKGRTVDF+NT++IMTSNVG+ +++ + +GF++
Sbjct: 618 DEVEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTIVIMTSNVGAEALKR-NKHLGFNV 676
Query: 545 DYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDR 604
+ +D Y+ +K V +ELK+ FRPEFLNR+DE+IVF L K ++EI +M+ ++ +R
Sbjct: 677 QDESRD--YSDMKGKVMDELKKAFRPEFLNRIDEIIVFHMLEKKHIQEIVTLMVNQLVNR 734
Query: 605 LKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVI 664
LK ++IEL +TE + ++G++ YGARPLRRAI + +ED ++E++L I++G VI
Sbjct: 735 LKEQEIELHLTEGAIAAIADKGFDREYGARPLRRAIQKHVEDRLSEELLKGAIEKGQKVI 794
Query: 665 VDVDSD 670
DV+ +
Sbjct: 795 FDVEGE 800
>gi|229917386|ref|YP_002886032.1| ATPase AAA [Exiguobacterium sp. AT1b]
gi|229468815|gb|ACQ70587.1| ATPase AAA-2 domain protein [Exiguobacterium sp. AT1b]
Length = 811
Score = 792 bits (2046), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/677 (57%), Positives = 512/677 (75%), Gaps = 11/677 (1%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
++G + + A G S+ PTL+ +LT+ A E +LDPV+GR +I+RV+++L R
Sbjct: 141 LLGNTESSSNASQPGASAAT--PTLDGLARDLTQQARESRLDPVIGRAGEIQRVIEVLSR 198
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNP LIGEPGVGKTA+ EGLAQ+I + +VP+T+ K+V+ LDMG LVAGTKYRGEFE
Sbjct: 199 RTKNNPVLIGEPGVGKTAVVEGLAQQIINNEVPETLRNKRVMVLDMGTLVAGTKYRGEFE 258
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
+RLKK+M+EI+Q+ +ILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTLD
Sbjct: 259 DRLKKVMDEIRQAGNVILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLD 318
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRK+IEKD ALERRFQP++V EP+ +E QIL GLR+RYE HH++ TD A+ A LS
Sbjct: 319 EYRKYIEKDAALERRFQPIQVNEPTTEEAEQILLGLRDRYEAHHRVTITDTAIHEAVVLS 378
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
+YISDRFLPDKAIDL+DEA S+VRLR P +ELE L I KEK+ AV+ Q+FEK
Sbjct: 379 DRYISDRFLPDKAIDLVDEAASKVRLRSFTAPPNLKELESRLESIRKEKDSAVQSQEFEK 438
Query: 301 AGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVS 360
A LRD E L+ ++ L ++ + + G+ VT+ DI +V+ WTG+PV K++
Sbjct: 439 AASLRDTEQKLRDELEEL------KAEWQNKQGNEKLEVTKEDIAQVVANWTGVPVTKIA 492
Query: 361 TDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 420
+E+DRLLK+E LH RVIGQD+AVK+ISRAIRRAR GLK+P RPI SFIF GPTGVGK+
Sbjct: 493 EEETDRLLKLESILHNRVIGQDDAVKSISRAIRRARAGLKDPKRPIGSFIFLGPTGVGKT 552
Query: 421 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 480
ELA+A+A FG E+A+IR+DMSE+ME+H S+L+GSPPGYVGY EGGQLTE VRR+PY+
Sbjct: 553 ELARAVAEAMFGDEDAIIRIDMSEYMEKHATSRLVGSPPGYVGYEEGGQLTEKVRRKPYS 612
Query: 481 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI 540
V+L DEIEKAHP+VFN++LQ+L+DGRLTDSKGRTVDF+NT++IMTSNVG++ +++ + +
Sbjct: 613 VILLDEIEKAHPEVFNILLQVLDDGRLTDSKGRTVDFRNTVIIMTSNVGAAALQR-NKYV 671
Query: 541 GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 600
GF ++ D K Y +K V EELK+ FRPEFLNR+DE+ VF L K ++EI +M +
Sbjct: 672 GFTVEDDVK-REYTEMKDKVLEELKKAFRPEFLNRIDEITVFHSLQKEHIQEIIKLMAET 730
Query: 601 VFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEG 660
+ RL + ++ +T+ +++ + GY+P YGARPLRRA+ R +ED ++E ML I G
Sbjct: 731 LKKRLAEQGVDFSLTDAALDKIADVGYDPEYGARPLRRALQREVEDRLSEAMLGGTIARG 790
Query: 661 DSVIVDVDSDGNVTVLN 677
V +DV DG V N
Sbjct: 791 SKVALDV-QDGEFVVRN 806
>gi|403251978|ref|ZP_10918293.1| ATPase with chaperone activity, ATP-binding subunit
[actinobacterium SCGC AAA027-L06]
gi|402914723|gb|EJX35731.1| ATPase with chaperone activity, ATP-binding subunit
[actinobacterium SCGC AAA027-L06]
Length = 737
Score = 792 bits (2046), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 394/688 (57%), Positives = 523/688 (76%), Gaps = 14/688 (2%)
Query: 4 ESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTK 63
+ EAV AG + L+++G NLT+ A EGKLDPV+GR+ +IERV+Q+L RRTK
Sbjct: 51 QGKEAVAAGGPAEGQPSTSLVLDQFGRNLTQAAREGKLDPVIGREKEIERVMQVLSRRTK 110
Query: 64 NNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERL 123
NNP LIGEPGVGKTA+ EGLAQ I GD+P+T++ K++ +LD+G LVAG++YRG+FEERL
Sbjct: 111 NNPVLIGEPGVGKTAVVEGLAQAIVKGDIPETLKDKQLYSLDLGALVAGSRYRGDFEERL 170
Query: 124 KKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYR 183
KK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEYR
Sbjct: 171 KKVLKEIRTRGDIILFIDEIHTLVGAGAAEGAIDAASILKPMLARGELQTIGATTLDEYR 230
Query: 184 KHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQY 243
KH+EKD ALERRFQP++V EP+V TI+ILKGLR+RYE HHK+ +D ALVSAA L+ +Y
Sbjct: 231 KHLEKDAALERRFQPIQVAEPTVAHTIEILKGLRDRYESHHKVSISDGALVSAATLADRY 290
Query: 244 ISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGE 303
+SDR LPDKAIDLIDEAGSR+R+R +P E RE + ++ KEK A+ GQDFEKA
Sbjct: 291 VSDRHLPDKAIDLIDEAGSRLRIRRMTVPPEIREYDDKIAAARKEKESAIDGQDFEKAAS 350
Query: 304 LRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKVS 360
LRD+E +L A+ K + +AGD+ VV EVD I ++S TGIPV K++
Sbjct: 351 LRDKEKNLIAE--------KAEREKNWKAGDL-DVVAEVDEELIAEVLSTATGIPVFKLT 401
Query: 361 TDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 420
E+ RLLKME+ LH+RVIGQD+A+KA+S+AIRR R GLK+P RP SFIF+GP+GVGK+
Sbjct: 402 EAETARLLKMEDELHRRVIGQDQAIKALSQAIRRTRAGLKDPKRPGGSFIFAGPSGVGKT 461
Query: 421 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 480
EL++ LA + FG +A+I+LDMSE+ E+HT S+L G+PPGYVGY EGGQLTE VRRRP++
Sbjct: 462 ELSRTLAQFLFGDSDALIQLDMSEYSEKHTASRLFGAPPGYVGYDEGGQLTEKVRRRPFS 521
Query: 481 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI 540
VVLFDEIEKAHPD+FN +LQ+LEDGRLTD++GR VDFKNT++IMT+N+G+ I K +
Sbjct: 522 VVLFDEIEKAHPDIFNSLLQVLEDGRLTDAQGRVVDFKNTIIIMTTNLGTRDISK-SLSL 580
Query: 541 GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 600
GF + + SY R+K+ V +ELK +FRPEFLNR+D+++VF QLT+ E+ +I D+M+ +
Sbjct: 581 GF-ANVADAQGSYERMKAKVGDELKSHFRPEFLNRIDDIVVFHQLTENEIIKIVDLMVAQ 639
Query: 601 VFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEG 660
+ +RLK KD+ +++T + + + GY+P GARPLRR I R LED ++EKML E+K G
Sbjct: 640 LDERLKAKDMGIELTTAAKSLLAKRGYDPVLGARPLRRTIQRELEDVLSEKMLFGELKAG 699
Query: 661 DSVIVDVDSDGNVTVLNGSSGAPESLAD 688
+ ++VDV + + A ++ D
Sbjct: 700 EIILVDVSDETDSATFTFKGAAKSAMPD 727
>gi|422420829|ref|ZP_16497782.1| negative regulator of genetic competence ClpC/MecB, partial
[Listeria seeligeri FSL S4-171]
gi|313639760|gb|EFS04509.1| negative regulator of genetic competence ClpC/MecB [Listeria
seeligeri FSL S4-171]
Length = 783
Score = 792 bits (2046), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/666 (58%), Positives = 514/666 (77%), Gaps = 10/666 (1%)
Query: 10 GAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLI 69
G G ++ PTL+ +LT +A E LDPV+GR +I+RV+++L RRTKNNP LI
Sbjct: 110 ATGAGRQTNTQATPTLDSLARDLTVIAREDNLDPVIGRSKEIQRVIEVLSRRTKNNPVLI 169
Query: 70 GEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEE 129
GEPGVGKTAIAEGLAQ+I +VP+T+ GK+V+TLDMG +VAGTKYRGEFE+RLKK+M+E
Sbjct: 170 GEPGVGKTAIAEGLAQQIVRNEVPETLRGKRVMTLDMGTVVAGTKYRGEFEDRLKKVMDE 229
Query: 130 IKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKD 189
I+Q+ +ILFIDE+HTLIGAG AEGAIDA+NILKP LARGELQCIGATTLDEYRK+IEKD
Sbjct: 230 IRQAGNVILFIDELHTLIGAGGAEGAIDASNILKPPLARGELQCIGATTLDEYRKYIEKD 289
Query: 190 PALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFL 249
ALERRFQP+KV EPSV+E+IQIL GLR+RYE HH++ TD+AL +A +LS +YISDRFL
Sbjct: 290 AALERRFQPIKVDEPSVEESIQILHGLRDRYEAHHRVAITDQALDAAVRLSDRYISDRFL 349
Query: 250 PDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREM 309
PDKAID+IDEAGS+VRL+ P+ +E+E L + KEK+ AV+GQ+FEKA LRD+E
Sbjct: 350 PDKAIDVIDEAGSKVRLKSFTTPKNVKEMENNLTDLKKEKDAAVQGQEFEKAAALRDKEH 409
Query: 310 DLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLK 369
LK + KE + VTE + +V++WTGIPV K++ E+++LL
Sbjct: 410 KLKKSLEETKANWKEKQGLDHSE------VTEDIVAEVVASWTGIPVAKLAETETNKLLN 463
Query: 370 MEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAY 429
ME+ LH+RVIGQD AVKA+S A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+ALA
Sbjct: 464 MEKLLHERVIGQDAAVKAVSLAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAES 523
Query: 430 YFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEK 489
FG E++MIR+DMSE+ME+ + ++L+G+PPGYVGY EGGQLTE VR++PY+VVL DEIEK
Sbjct: 524 MFGDEDSMIRIDMSEYMEKFSTARLVGAPPGYVGYEEGGQLTEKVRQKPYSVVLLDEIEK 583
Query: 490 AHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEK 549
AHPDVFNM+LQ+L+DGRLTDSKGR VDF+NT++IMTSN+G+ + K + +GF++ K
Sbjct: 584 AHPDVFNMLLQVLDDGRLTDSKGRVVDFRNTVIIMTSNIGAQEM-KQDKSMGFNVTDPLK 642
Query: 550 DSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKD 609
D + ++ V ++LKQ FRPEF+NR+DE IVF L + E+K+I ++ ++ RL +D
Sbjct: 643 D--HKAMEHRVLQDLKQAFRPEFINRIDETIVFHSLQEKELKQIVTLLTAQLTKRLSERD 700
Query: 610 IELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDS 669
I +++TE + ++ ++GY+P YGARPL+RAI + +ED ++E++L IK GD++ + V
Sbjct: 701 IHVKLTEGAKSKIAKDGYDPEYGARPLKRAIQKEVEDMLSEELLRGNIKVGDTIEIGV-K 759
Query: 670 DGNVTV 675
DG + V
Sbjct: 760 DGKLEV 765
>gi|229170933|ref|ZP_04298534.1| Negative regulator of genetic competence [Bacillus cereus MM3]
gi|423405194|ref|ZP_17382367.1| chaperone ClpB [Bacillus cereus BAG2X1-2]
gi|423462644|ref|ZP_17439438.1| chaperone ClpB [Bacillus cereus BAG5X2-1]
gi|423480037|ref|ZP_17456751.1| chaperone ClpB [Bacillus cereus BAG6X1-1]
gi|228612473|gb|EEK69694.1| Negative regulator of genetic competence [Bacillus cereus MM3]
gi|401130823|gb|EJQ38479.1| chaperone ClpB [Bacillus cereus BAG5X2-1]
gi|401645564|gb|EJS63219.1| chaperone ClpB [Bacillus cereus BAG2X1-2]
gi|402424021|gb|EJV56217.1| chaperone ClpB [Bacillus cereus BAG6X1-1]
Length = 811
Score = 792 bits (2046), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/669 (59%), Positives = 519/669 (77%), Gaps = 9/669 (1%)
Query: 5 STEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKN 64
S EA GG S+ PTL+ +LT +A E +LDPV+GR +I+RV+++L RRTKN
Sbjct: 144 SNEASSGHQGGSSTNANTPTLDSLARDLTVVARENRLDPVIGRGKEIQRVIEVLSRRTKN 203
Query: 65 NPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLK 124
NP LIGEPGVGKTAIAEGLAQ+I + +VP+T+ K+V+TLDMG +VAGTKYRGEFE+RLK
Sbjct: 204 NPVLIGEPGVGKTAIAEGLAQQIVNNEVPETLRDKRVMTLDMGTVVAGTKYRGEFEDRLK 263
Query: 125 KLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRK 184
K+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTLDEYRK
Sbjct: 264 KVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEYRK 323
Query: 185 HIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYI 244
+IEKD ALERRFQP+ V EPS+DE+ QILKGLR+RYE HH++ TD+A+ +A +LS +YI
Sbjct: 324 YIEKDAALERRFQPIHVDEPSLDESTQILKGLRDRYEAHHRVSITDDAIDAAVKLSDRYI 383
Query: 245 SDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGEL 304
+DRFLPDKAIDLIDEA S+VRLR P +ELE +L +I KEK+ AV+ Q+FEKA L
Sbjct: 384 TDRFLPDKAIDLIDEAASKVRLRSYTTPPNLKELEVKLEEIRKEKDAAVQSQEFEKAASL 443
Query: 305 RDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDES 364
RD E L+ ++ + KE E VT DI ++VS WT IPV K++ E+
Sbjct: 444 RDMEQRLREKLEDTKRQWKEQQGKENSE------VTVEDIANVVSTWTRIPVSKLAQTET 497
Query: 365 DRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAK 424
D+LL +E LH RVIGQDEAV A+++A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+
Sbjct: 498 DKLLNLESILHNRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELAR 557
Query: 425 ALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLF 484
ALA FG E+AMIR+DMSE+ME+H+ S+L+GSPPGYVGY EGGQLTE VRR+PY+VVL
Sbjct: 558 ALAESMFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPYSVVLL 617
Query: 485 DEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDL 544
DE+EKAHPDVFN++LQ+LEDGRLTDSKGRTVDF+NT++IMTSNVG+ +++ + +GF++
Sbjct: 618 DEVEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTIVIMTSNVGADALKR-NKHLGFNV 676
Query: 545 DYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDR 604
+ +D Y+ +K V +ELK+ FRPEFLNR+DE+IVF L K ++EI +M+ ++ R
Sbjct: 677 QDESRD--YSDMKGKVMDELKKAFRPEFLNRIDEIIVFHMLEKKHIQEIVTLMVNQLVKR 734
Query: 605 LKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVI 664
LK ++IEL +TE + ++G++ YGARPLRRAI + +ED ++E++L I++G VI
Sbjct: 735 LKEQEIELHLTEGAISAIADKGFDREYGARPLRRAIQKHVEDRLSEELLKGAIEKGQKVI 794
Query: 665 VDVDSDGNV 673
DV+ + V
Sbjct: 795 FDVEGESFV 803
>gi|30018352|ref|NP_829983.1| negative regulator of genetic competence clpC/mecB [Bacillus cereus
ATCC 14579]
gi|228956523|ref|ZP_04118319.1| Negative regulator of genetic competence [Bacillus thuringiensis
serovar pakistani str. T13001]
gi|229107768|ref|ZP_04237404.1| Negative regulator of genetic competence [Bacillus cereus Rock1-15]
gi|229125599|ref|ZP_04254631.1| Negative regulator of genetic competence [Bacillus cereus
BDRD-Cer4]
gi|229142888|ref|ZP_04271329.1| Negative regulator of genetic competence [Bacillus cereus
BDRD-ST24]
gi|296500916|ref|YP_003662616.1| genetic competence negative regulator ClpC/MecB [Bacillus
thuringiensis BMB171]
gi|423631991|ref|ZP_17607737.1| chaperone ClpB [Bacillus cereus VD154]
gi|423638085|ref|ZP_17613737.1| chaperone ClpB [Bacillus cereus VD156]
gi|423646217|ref|ZP_17621787.1| chaperone ClpB [Bacillus cereus VD169]
gi|423653016|ref|ZP_17628315.1| chaperone ClpB [Bacillus cereus VD200]
gi|29893892|gb|AAP07184.1| Negative regulator of genetic competence clpC/mecB [Bacillus cereus
ATCC 14579]
gi|228640509|gb|EEK96898.1| Negative regulator of genetic competence [Bacillus cereus
BDRD-ST24]
gi|228657791|gb|EEL13597.1| Negative regulator of genetic competence [Bacillus cereus
BDRD-Cer4]
gi|228675617|gb|EEL30825.1| Negative regulator of genetic competence [Bacillus cereus Rock1-15]
gi|228803088|gb|EEM49910.1| Negative regulator of genetic competence [Bacillus thuringiensis
serovar pakistani str. T13001]
gi|296321968|gb|ADH04896.1| negative regulator of genetic competence clpC/mecB [Bacillus
thuringiensis BMB171]
gi|401262710|gb|EJR68848.1| chaperone ClpB [Bacillus cereus VD154]
gi|401271809|gb|EJR77812.1| chaperone ClpB [Bacillus cereus VD156]
gi|401287846|gb|EJR93613.1| chaperone ClpB [Bacillus cereus VD169]
gi|401303124|gb|EJS08687.1| chaperone ClpB [Bacillus cereus VD200]
Length = 811
Score = 792 bits (2046), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/666 (59%), Positives = 519/666 (77%), Gaps = 9/666 (1%)
Query: 5 STEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKN 64
S EA GG S+ PTL+ +LT +A E +LDPV+GR +I+RV+++L RRTKN
Sbjct: 144 SNEASSGHQGGSSTNANTPTLDSLARDLTVVARENRLDPVIGRSKEIQRVIEVLSRRTKN 203
Query: 65 NPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLK 124
NP LIGEPGVGKTAIAEGLAQ+I + +VP+T+ K+V+TLDMG +VAGTKYRGEFE+RLK
Sbjct: 204 NPVLIGEPGVGKTAIAEGLAQQIVNNEVPETLRDKRVMTLDMGTVVAGTKYRGEFEDRLK 263
Query: 125 KLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRK 184
K+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTLDEYRK
Sbjct: 264 KVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEYRK 323
Query: 185 HIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYI 244
+IEKD ALERRFQP+ V EPS++E+ QILKGLR+RYE HH++ TD+A+ +A +LS +YI
Sbjct: 324 YIEKDAALERRFQPIHVDEPSLEESTQILKGLRDRYEAHHRVSITDDAIDAAVKLSDRYI 383
Query: 245 SDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGEL 304
+DRFLPDKAIDLIDEA S+VRLR P +ELE +L +I KEK+ AV+ Q+FEKA L
Sbjct: 384 TDRFLPDKAIDLIDEAASKVRLRSYTTPPNLKELEVKLEEIRKEKDAAVQSQEFEKAASL 443
Query: 305 RDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDES 364
RD E L+ ++ + KE E VT DI ++VS WT IPV K++ E+
Sbjct: 444 RDMEQRLREKLEDTKRQWKEQQGKENSE------VTVEDIANVVSTWTRIPVSKLAQTET 497
Query: 365 DRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAK 424
D+LL +E LH RVIGQDEAV A+++A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+
Sbjct: 498 DKLLNLESILHDRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELAR 557
Query: 425 ALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLF 484
ALA FG E+AMIR+DMSE+ME+H+ S+L+GSPPGYVGY EGGQLTE VRR+PY+VVL
Sbjct: 558 ALAESMFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPYSVVLL 617
Query: 485 DEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDL 544
DE+EKAHPDVFN++LQ+LEDGRLTDSKGRTVDF+NT++IMTSNVG+ +++ + +GF++
Sbjct: 618 DEVEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTIVIMTSNVGAEALKR-NKHLGFNV 676
Query: 545 DYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDR 604
+ +D Y+ +K V +ELK+ FRPEFLNR+DE+IVF L K ++EI +M+ ++ +R
Sbjct: 677 QDESRD--YSDMKGKVMDELKKAFRPEFLNRIDEIIVFHMLEKKHIQEIVTLMVNQLVNR 734
Query: 605 LKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVI 664
LK ++IEL +TE + ++G++ YGARPLRRAI + +ED ++E++L I++G VI
Sbjct: 735 LKEQEIELHLTEGAIAAIADKGFDREYGARPLRRAIQKHVEDRLSEELLKGAIEKGQKVI 794
Query: 665 VDVDSD 670
DV+ +
Sbjct: 795 FDVEGE 800
>gi|56961903|ref|YP_173625.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Bacillus
clausii KSM-K16]
gi|56908137|dbj|BAD62664.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Bacillus
clausii KSM-K16]
Length = 818
Score = 792 bits (2045), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/678 (57%), Positives = 520/678 (76%), Gaps = 16/678 (2%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
++G + + G ++ PTL+ +LT +A E LDPV+GR +IERV+Q+L R
Sbjct: 145 LLGSNEGGSSSQSNGAATNANTPTLDSLARDLTAIAREETLDPVIGRSREIERVIQVLSR 204
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNP LIGEPGVGKTAIAEGLAQ I + +VP+T+ K+V+TLDMG +VAGTKYRGEFE
Sbjct: 205 RTKNNPVLIGEPGVGKTAIAEGLAQSIVANEVPETLRNKRVMTLDMGTVVAGTKYRGEFE 264
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
+RLKK+M+EI+Q+ +ILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTLD
Sbjct: 265 DRLKKVMDEIRQAGNVILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLD 324
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRK+IEKD ALERRFQP++V EP++DE+IQIL GLR+RYE HH++ TDEA+ A +LS
Sbjct: 325 EYRKYIEKDAALERRFQPIQVDEPTIDESIQILYGLRDRYEAHHRVTITDEAVEEAVKLS 384
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
+YISDRFLPDKAIDLIDEA S+VRLR P +ELE +L + KEK+ +V+ Q+FEK
Sbjct: 385 DRYISDRFLPDKAIDLIDEAASKVRLRSYTAPPNLKELEAKLEETRKEKDASVQSQEFEK 444
Query: 301 AGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEV---DIQHIVSAWTGIPVE 357
A LRD E L+ ++ + ++ K+ E TEV DI +VS+WTGIPV
Sbjct: 445 AASLRDTEQRLREELEEMKNEWKKKQGQEN---------TEVLVEDIAQVVSSWTGIPVS 495
Query: 358 KVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGV 417
K++ +E++RLLKMEE LH+RV+GQ+EAVK+IS+AIRRAR GLK+P RPI SFIF GPTGV
Sbjct: 496 KLAEEETERLLKMEEILHERVVGQEEAVKSISKAIRRARAGLKDPKRPIGSFIFLGPTGV 555
Query: 418 GKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRR 477
GK+ELA+A+A FG E+A+IR+DMSE+ME+H S+L+GSPPGYVG+ EGGQLTE +RR+
Sbjct: 556 GKTELARAVAETLFGDEDAVIRIDMSEYMEKHATSRLVGSPPGYVGHEEGGQLTEKIRRK 615
Query: 478 PYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGG 537
PY+V+L DEIEKAHPDVFN++LQ+LEDGRLTDSKGRTVDF+NT +IMTSNVG+S +++
Sbjct: 616 PYSVILLDEIEKAHPDVFNLLLQVLEDGRLTDSKGRTVDFRNTAVIMTSNVGASQLKR-N 674
Query: 538 RRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIM 597
+ +GF ++ + ++ Y +K V ELK FRPEFLNR+DE+IVF L K V++I M
Sbjct: 675 KYLGFTIESEGQE--YKDMKDRVMSELKNSFRPEFLNRIDEIIVFHSLEKKHVRKIITKM 732
Query: 598 LKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREI 657
++ RL + I+ ++TE ++++ + G++P YGARPLRRA+ + +ED ++E++L I
Sbjct: 733 ADQLKGRLSEQGIDFELTEEAKDKITDIGFDPEYGARPLRRALQKEVEDRLSEELLKGTI 792
Query: 658 KEGDSVIVDVDSDGNVTV 675
+G ++ V DG + V
Sbjct: 793 VKGQKAVIYV-KDGKLMV 809
>gi|359775853|ref|ZP_09279175.1| putative ATP-dependent Clp protease ATP-binding subunit ClpC
[Arthrobacter globiformis NBRC 12137]
gi|359306869|dbj|GAB13004.1| putative ATP-dependent Clp protease ATP-binding subunit ClpC
[Arthrobacter globiformis NBRC 12137]
Length = 830
Score = 792 bits (2045), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/674 (59%), Positives = 520/674 (77%), Gaps = 15/674 (2%)
Query: 4 ESTEAVGAGVG-----GGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQIL 58
+ E+ GAGVG G +G+ + L+++G NLT+ A E KLDPV+GR+ ++ERV+Q+L
Sbjct: 146 QGKESTGAGVGQSQAEGTPAGSVV--LDQFGRNLTQAARENKLDPVIGREQEMERVMQVL 203
Query: 59 GRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGE 118
RRTKNNP LIGEPGVGKTA+ EGLAQ I GDVP+TI+ K++ TLD+G LVAG++YRG+
Sbjct: 204 SRRTKNNPVLIGEPGVGKTAVVEGLAQAIVRGDVPETIKDKQLYTLDLGSLVAGSRYRGD 263
Query: 119 FEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATT 178
FEERLKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATT
Sbjct: 264 FEERLKKVLKEIRTRGDIILFIDEIHTLVGAGAAEGAIDAASILKPMLARGELQTIGATT 323
Query: 179 LDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQ 238
LDEYRKHIEKD ALERRFQP++V EPSV I+ILKGLR+RYE HH++ TD AL SAA
Sbjct: 324 LDEYRKHIEKDAALERRFQPIQVKEPSVAHAIEILKGLRDRYEAHHRVTITDGALASAAN 383
Query: 239 LSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDF 298
LS +YISDRFLPDKAIDLIDEAG+R+R+R P E +E+++ + ++ EK A+ QDF
Sbjct: 384 LSERYISDRFLPDKAIDLIDEAGARLRIRRMTAPPELKEMDERISELKMEKESAIDAQDF 443
Query: 299 EKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEK 358
E A LRD+E L + ++ ++ +T D V E I +++ TGIPV K
Sbjct: 444 EGAAALRDKEQKL------ITERSEKERHWKTGGMDDISEVDEDLIAEVLANSTGIPVFK 497
Query: 359 VSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVG 418
++ +ES RLLKME+ LHKRV+GQDEA+KA+S+AIRR R GLK+P RP SFIF+GPTGVG
Sbjct: 498 LTEEESSRLLKMEDELHKRVVGQDEAIKALSQAIRRTRAGLKDPKRPGGSFIFAGPTGVG 557
Query: 419 KSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRP 478
K+ELAKALA + FG E+A+I LDMSE+ E+HTVS+L G+PPGYVGY EGGQLTE VRRRP
Sbjct: 558 KTELAKALAEFLFGEEDALITLDMSEYSEKHTVSRLFGAPPGYVGYEEGGQLTEKVRRRP 617
Query: 479 YTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR 538
++VVLFDE+EKAH D+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N+G+ I K
Sbjct: 618 FSVVLFDEVEKAHADLFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNLGTRDISK-SV 676
Query: 539 RIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIML 598
GF D + + YNR+++ VTEELKQ+FRPEFLNR+D+++VF QLT+ E+ EI D+ +
Sbjct: 677 ATGFQSGTDTQ-TGYNRMRARVTEELKQHFRPEFLNRVDDVVVFPQLTQDEIIEIVDLFV 735
Query: 599 KEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIK 658
+ RLK KD+ +++T+ + + GY+P+ GARPLRR I R +ED ++EK+L E+
Sbjct: 736 TRLEKRLKDKDMGIELTKAAKVLLATRGYDPAMGARPLRRTIQREIEDQLSEKILFGELH 795
Query: 659 EGDSVIVDVDSDGN 672
GD V+VDVD +G+
Sbjct: 796 PGDIVVVDVDGEGD 809
>gi|229074143|ref|ZP_04207189.1| Negative regulator of genetic competence [Bacillus cereus Rock4-18]
gi|229094804|ref|ZP_04225809.1| Negative regulator of genetic competence [Bacillus cereus Rock3-29]
gi|229100880|ref|ZP_04231685.1| Negative regulator of genetic competence [Bacillus cereus Rock3-28]
gi|229113758|ref|ZP_04243193.1| Negative regulator of genetic competence [Bacillus cereus Rock1-3]
gi|407708030|ref|YP_006831615.1| ATP/GTP hydrolase [Bacillus thuringiensis MC28]
gi|423381871|ref|ZP_17359154.1| chaperone ClpB [Bacillus cereus BAG1O-2]
gi|423439740|ref|ZP_17416646.1| chaperone ClpB [Bacillus cereus BAG4X2-1]
gi|423450103|ref|ZP_17426981.1| chaperone ClpB [Bacillus cereus BAG5O-1]
gi|423467997|ref|ZP_17444765.1| chaperone ClpB [Bacillus cereus BAG6O-1]
gi|423537397|ref|ZP_17513815.1| chaperone ClpB [Bacillus cereus HuB2-9]
gi|423543125|ref|ZP_17519513.1| chaperone ClpB [Bacillus cereus HuB4-10]
gi|423543569|ref|ZP_17519927.1| chaperone ClpB [Bacillus cereus HuB5-5]
gi|423620310|ref|ZP_17596141.1| chaperone ClpB [Bacillus cereus VD115]
gi|423626976|ref|ZP_17602751.1| chaperone ClpB [Bacillus cereus VD148]
gi|228669629|gb|EEL25036.1| Negative regulator of genetic competence [Bacillus cereus Rock1-3]
gi|228682534|gb|EEL36606.1| Negative regulator of genetic competence [Bacillus cereus Rock3-28]
gi|228688547|gb|EEL42420.1| Negative regulator of genetic competence [Bacillus cereus Rock3-29]
gi|228708913|gb|EEL61040.1| Negative regulator of genetic competence [Bacillus cereus Rock4-18]
gi|401126726|gb|EJQ34460.1| chaperone ClpB [Bacillus cereus BAG5O-1]
gi|401166825|gb|EJQ74125.1| chaperone ClpB [Bacillus cereus HuB4-10]
gi|401187734|gb|EJQ94806.1| chaperone ClpB [Bacillus cereus HuB5-5]
gi|401248870|gb|EJR55191.1| chaperone ClpB [Bacillus cereus VD115]
gi|401250171|gb|EJR56475.1| chaperone ClpB [Bacillus cereus VD148]
gi|401628497|gb|EJS46338.1| chaperone ClpB [Bacillus cereus BAG1O-2]
gi|402411864|gb|EJV44227.1| chaperone ClpB [Bacillus cereus BAG6O-1]
gi|402421921|gb|EJV54165.1| chaperone ClpB [Bacillus cereus BAG4X2-1]
gi|402459103|gb|EJV90841.1| chaperone ClpB [Bacillus cereus HuB2-9]
gi|407385715|gb|AFU16216.1| Negative regulator of genetic competence [Bacillus thuringiensis
MC28]
Length = 811
Score = 792 bits (2045), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 398/669 (59%), Positives = 522/669 (78%), Gaps = 9/669 (1%)
Query: 5 STEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKN 64
S EA GG ++ PTL+ +LT +A E +LDPV+GR +I+RV+++L RRTKN
Sbjct: 144 SNEASSGHQGGSATNANTPTLDSLARDLTVVARENRLDPVIGRGKEIQRVIEVLSRRTKN 203
Query: 65 NPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLK 124
NP LIGEPGVGKTAIAEGLAQ+I + +VP+T+ K+V+TLDMG +VAGTKYRGEFE+RLK
Sbjct: 204 NPVLIGEPGVGKTAIAEGLAQQIVNNEVPETLRDKRVMTLDMGTVVAGTKYRGEFEDRLK 263
Query: 125 KLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRK 184
K+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTLDEYRK
Sbjct: 264 KVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEYRK 323
Query: 185 HIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYI 244
+IEKD ALERRFQP+ V EPS++E+IQILKGLR+RYE HH++ TD+A+ +A +LS +YI
Sbjct: 324 YIEKDAALERRFQPIHVDEPSLEESIQILKGLRDRYEAHHRVSITDDAIDAAVKLSDRYI 383
Query: 245 SDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGEL 304
+DRFLPDKAIDLIDEA S+VRLR P +ELE +L +I KEK+ AV+ Q+FEKA L
Sbjct: 384 TDRFLPDKAIDLIDEAASKVRLRSYTTPPNLKELEVKLEEIRKEKDAAVQSQEFEKAASL 443
Query: 305 RDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDES 364
RD E L+ ++ + KE E VT DI ++VS WT IPV K++ E+
Sbjct: 444 RDMEQRLREKLEDTKRQWKEQQGKENSE------VTVEDIANVVSTWTRIPVSKLAQTET 497
Query: 365 DRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAK 424
D+LL +E LH R+IGQDEAV A+++A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+
Sbjct: 498 DKLLNLESILHDRLIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELAR 557
Query: 425 ALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLF 484
ALA FG E+AMIR+DMSE+ME+H+ S+L+GSPPGYVGY EGGQLTE VRR+PY+VVL
Sbjct: 558 ALAESMFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPYSVVLL 617
Query: 485 DEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDL 544
DE+EKAHPDVFN++LQ+LEDGRLTDSKGRTVDF+NT++IMTSNVG+ +++ + +GF++
Sbjct: 618 DEVEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTIVIMTSNVGADALKR-NKYLGFNV 676
Query: 545 DYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDR 604
+ +D Y+ +K V +ELK+ FRPEFLNR+DE+IVF L K ++EI +M+ ++ +R
Sbjct: 677 QDESRD--YSDMKGKVMDELKKAFRPEFLNRIDEIIVFHMLEKKHIQEIVTLMVNQLVNR 734
Query: 605 LKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVI 664
LK ++IELQ+TE + ++G++ YGARPLRRAI + +ED ++E++L I++G VI
Sbjct: 735 LKEQEIELQLTEGAISAIADKGFDREYGARPLRRAIQKHVEDRLSEELLKGAIEKGQKVI 794
Query: 665 VDVDSDGNV 673
DV+ + V
Sbjct: 795 FDVEGESFV 803
>gi|288554696|ref|YP_003426631.1| class III stress response-related ATPase [Bacillus pseudofirmus
OF4]
gi|288545856|gb|ADC49739.1| class III stress response-related ATPase [Bacillus pseudofirmus
OF4]
Length = 813
Score = 792 bits (2045), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/658 (59%), Positives = 516/658 (78%), Gaps = 11/658 (1%)
Query: 14 GGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPG 73
GG ++ PTL+ +LT +A E LDPV+GR +IERV+Q+L RRTKNNP LIGEPG
Sbjct: 154 GGSATHANTPTLDSLARDLTAIAREESLDPVIGRSKEIERVIQVLSRRTKNNPVLIGEPG 213
Query: 74 VGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQS 133
VGKTAIAEGLAQ I + +VP+T+ K+V+TLDMG +VAGTKYRGEFE+RLKK+M+EI+Q+
Sbjct: 214 VGKTAIAEGLAQAIVANEVPETLRNKRVMTLDMGTVVAGTKYRGEFEDRLKKVMDEIRQA 273
Query: 134 DEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALE 193
+ILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTLDEYRK+IEKD ALE
Sbjct: 274 GNVILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEYRKYIEKDAALE 333
Query: 194 RRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKA 253
RRFQP++V EP+++E+I ILKGLR+RYE HH++ TDEA+ + ++S +YISDRFLPDKA
Sbjct: 334 RRFQPIQVNEPTLEESILILKGLRDRYEAHHRVTITDEAIEESVKMSDRYISDRFLPDKA 393
Query: 254 IDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKA 313
IDLIDEA S+VRLR P +ELE L + KEK+ AV+ Q+FEKA LRD E L+
Sbjct: 394 IDLIDEAASKVRLRSYTAPPNLKELEGRLEETRKEKDAAVQSQEFEKAASLRDTEQRLRE 453
Query: 314 QISALVDKGKEMSKAE-TEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEE 372
++ + ++ K+ E TE VV E DI +V++WTGIPV K++ +E++RLLKME+
Sbjct: 454 ELEEMKNEWKKKQGQEDTE------VVVE-DIAQVVASWTGIPVSKLAEEETERLLKMEK 506
Query: 373 TLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFG 432
LH+RV+GQ+EAV +IS+A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+A+A FG
Sbjct: 507 ILHERVVGQEEAVISISKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARAVAETLFG 566
Query: 433 SEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHP 492
E+A+IR+DMSE+ME+H S+L+GSPPGYVG+ +GGQLTE VRR+PY+V+L DEIEKAHP
Sbjct: 567 DEDAVIRIDMSEYMEKHATSRLVGSPPGYVGHEDGGQLTEKVRRKPYSVILLDEIEKAHP 626
Query: 493 DVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSS 552
+VFN++LQ+LEDGRLTDSKGRTVDF+NT +IMTSNVG+S +++ + +GF + + ++
Sbjct: 627 EVFNILLQVLEDGRLTDSKGRTVDFRNTAIIMTSNVGASTLKR-NKYLGFTTESEGQE-- 683
Query: 553 YNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIEL 612
Y +K V ELK+ FRPEFLNR+DE+IVF L K V+EI +M ++ RLK + I+
Sbjct: 684 YKDMKGKVMAELKRSFRPEFLNRIDEIIVFHSLEKKHVREIITLMADQLKQRLKEQGIDF 743
Query: 613 QVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSD 670
++TE ++++ + GY+P YGARPLRRA+ + +ED ++E++L I +G I+DV D
Sbjct: 744 ELTEAAKDKITDLGYDPEYGARPLRRALQKQVEDRLSEELLKGTIFKGQKAIIDVKDD 801
>gi|228937384|ref|ZP_04100030.1| Negative regulator of genetic competence [Bacillus thuringiensis
serovar berliner ATCC 10792]
gi|228970270|ref|ZP_04130929.1| Negative regulator of genetic competence [Bacillus thuringiensis
serovar thuringiensis str. T01001]
gi|228976840|ref|ZP_04137252.1| Negative regulator of genetic competence [Bacillus thuringiensis
Bt407]
gi|384184166|ref|YP_005570062.1| negative regulator of genetic competence clpC/mecB [Bacillus
thuringiensis serovar chinensis CT-43]
gi|410672453|ref|YP_006924824.1| negative regulator of genetic competence ClpC/MecB [Bacillus
thuringiensis Bt407]
gi|423387432|ref|ZP_17364686.1| chaperone ClpB [Bacillus cereus BAG1X1-2]
gi|423526620|ref|ZP_17503065.1| chaperone ClpB [Bacillus cereus HuB1-1]
gi|452196459|ref|YP_007476540.1| ATP-dependent Clp protease [Bacillus thuringiensis serovar
thuringiensis str. IS5056]
gi|228782810|gb|EEM30976.1| Negative regulator of genetic competence [Bacillus thuringiensis
Bt407]
gi|228789379|gb|EEM37299.1| Negative regulator of genetic competence [Bacillus thuringiensis
serovar thuringiensis str. T01001]
gi|228822217|gb|EEM68199.1| Negative regulator of genetic competence [Bacillus thuringiensis
serovar berliner ATCC 10792]
gi|326937875|gb|AEA13771.1| negative regulator of genetic competence clpC/mecB [Bacillus
thuringiensis serovar chinensis CT-43]
gi|401629015|gb|EJS46843.1| chaperone ClpB [Bacillus cereus BAG1X1-2]
gi|402455660|gb|EJV87441.1| chaperone ClpB [Bacillus cereus HuB1-1]
gi|409171582|gb|AFV15887.1| negative regulator of genetic competence ClpC/MecB [Bacillus
thuringiensis Bt407]
gi|452101852|gb|AGF98791.1| ATP-dependent Clp protease [Bacillus thuringiensis serovar
thuringiensis str. IS5056]
Length = 811
Score = 792 bits (2045), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 398/669 (59%), Positives = 521/669 (77%), Gaps = 9/669 (1%)
Query: 5 STEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKN 64
S EA GG +S PTL+ +LT +A E +LDPV+GR +I+RV+++L RRTKN
Sbjct: 144 SNEASSGHQGGSASNANTPTLDSLARDLTVVARENRLDPVIGRGKEIQRVIEVLSRRTKN 203
Query: 65 NPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLK 124
NP LIGEPGVGKTAIAEGLAQ+I + +VP+T+ K+V+TLDMG +VAGTKYRGEFE+RLK
Sbjct: 204 NPVLIGEPGVGKTAIAEGLAQQIVNNEVPETLRDKRVMTLDMGTVVAGTKYRGEFEDRLK 263
Query: 125 KLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRK 184
K+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTLDEYRK
Sbjct: 264 KVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEYRK 323
Query: 185 HIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYI 244
+IEKD ALERRFQP+ V EPS++E+IQILKGLR+RYE HH++ TD+A+ +A +LS +YI
Sbjct: 324 YIEKDAALERRFQPIHVDEPSLEESIQILKGLRDRYEAHHRVSITDDAIDAAVKLSDRYI 383
Query: 245 SDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGEL 304
+DRFLPDKAIDLIDEA S+VRLR P +ELE +L +I KEK+ AV+ Q+FEKA L
Sbjct: 384 TDRFLPDKAIDLIDEAASKVRLRSYTTPPNLKELEVKLEEIRKEKDAAVQSQEFEKAASL 443
Query: 305 RDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDES 364
RD E L+ ++ + KE E VT DI ++VS WT IPV K++ E+
Sbjct: 444 RDMEQRLREKLEDTKRQWKEQQGKENSE------VTVEDIANVVSTWTRIPVSKLAQTET 497
Query: 365 DRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAK 424
D+LL +E LH R+IGQDEAV A+++A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+
Sbjct: 498 DKLLNLESILHDRLIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELAR 557
Query: 425 ALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLF 484
ALA FG E+AMIR+DMSE+ME+H+ S+L+GSPPGYVGY EGGQLTE VRR+PY+VVL
Sbjct: 558 ALAESMFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPYSVVLL 617
Query: 485 DEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDL 544
DE+EKAHPDVFN++LQ+LEDGRLTDSKGRTVDF+NT++IMTSNVG+ +++ + +GF++
Sbjct: 618 DEVEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTIVIMTSNVGAEALKR-NKHLGFNV 676
Query: 545 DYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDR 604
+ +D Y+ +K V +ELK+ FRPEFLNR+DE+IVF L K ++EI +M+ ++ +R
Sbjct: 677 QDESRD--YSDMKGKVMDELKKAFRPEFLNRIDEIIVFHMLEKKHIQEIVTLMVNQLVNR 734
Query: 605 LKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVI 664
LK ++IEL +TE + ++G++ YGARPLRRAI + +ED ++E++L I++G VI
Sbjct: 735 LKEQEIELHLTEGAISAIADKGFDREYGARPLRRAIQKHVEDRLSEELLKGAIEKGQKVI 794
Query: 665 VDVDSDGNV 673
DV+ + V
Sbjct: 795 FDVEGESFV 803
>gi|256826231|ref|YP_003150191.1| ATPase with chaperone activity [Kytococcus sedentarius DSM 20547]
gi|256689624|gb|ACV07426.1| ATPase with chaperone activity, ATP-binding subunit [Kytococcus
sedentarius DSM 20547]
Length = 866
Score = 791 bits (2044), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/666 (59%), Positives = 516/666 (77%), Gaps = 13/666 (1%)
Query: 7 EAVGAGVGGGSSGNKMP---TLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTK 63
+A G G GG + L+++G NLT+ A EGKLDPV+GR+ +IERV+Q+L RRTK
Sbjct: 153 QAAGVGASGGQAEGTPAGSLVLDQFGRNLTQAAREGKLDPVIGRETEIERVMQVLSRRTK 212
Query: 64 NNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERL 123
NNP LIGEPGVGKTA+ EGLA I +G VP+T++ K V TLD+G LVAG++YRG+FEERL
Sbjct: 213 NNPVLIGEPGVGKTAVVEGLAADIVAGTVPETLKDKHVYTLDLGSLVAGSRYRGDFEERL 272
Query: 124 KKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYR 183
KK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAANILKP LARGELQ IGATTL+EYR
Sbjct: 273 KKVLKEIRTRGDIILFIDEIHTLVGAGAAEGAIDAANILKPMLARGELQTIGATTLEEYR 332
Query: 184 KHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQY 243
KHIEKD ALERRFQP++V EPS+ I+ILKGLR+RYE HH++ TD AL SA ++ +Y
Sbjct: 333 KHIEKDAALERRFQPIQVNEPSLAHAIEILKGLRDRYEAHHRVSITDGALASAVNMADRY 392
Query: 244 ISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGE 303
++DRFLPDKAIDLIDEAG+R+R++ P + RE+++++ + +EK A+ GQDFEKA
Sbjct: 393 VNDRFLPDKAIDLIDEAGARLRIQRMTAPPDLREIDEKIANVRREKESAIDGQDFEKAAS 452
Query: 304 LRDREMDLKAQISALVDKGKEMSKAETEAG-DVGPVVTEVDIQHIVSAWTGIPVEKVSTD 362
LRD E L L ++G E KA E DV VV E I +++A TGIPV ++S +
Sbjct: 453 LRDDEQKL------LNERG-EREKAWKEGDQDVAAVVDEDVIAEVLAATTGIPVFRISEE 505
Query: 363 ESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSEL 422
ES RLLKME+ LHKR++G D+A+ A+S+AIRR R GLK+P RP SFIF+GPTGVGK+EL
Sbjct: 506 ESSRLLKMEDELHKRIVGMDDAIHALSQAIRRTRAGLKDPRRPGGSFIFAGPTGVGKTEL 565
Query: 423 AKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVV 482
AKALA + FG E+A+I+LDMSEF E+HTVS++ GSPPGYVGY EGGQLTE VRR+P++VV
Sbjct: 566 AKALAEFLFGDEDALIQLDMSEFGEKHTVSRMFGSPPGYVGYDEGGQLTEKVRRKPFSVV 625
Query: 483 LFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGF 542
LFDE+EKAHPDVFN +LQILEDGRLTDS+GRTVDFKNT++IMT+N+G+ I K G +GF
Sbjct: 626 LFDEVEKAHPDVFNSLLQILEDGRLTDSQGRTVDFKNTIIIMTTNLGARDIAK-GVSLGF 684
Query: 543 DLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVF 602
E + Y R+K+ V+EELKQ+FRPEFLNR+D+ +VF QL++ E+ +I D+M+ +
Sbjct: 685 SAG-PESGTDYERLKAKVSEELKQHFRPEFLNRVDDTVVFPQLSQAEIVQIVDLMIDRLS 743
Query: 603 DRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDS 662
+RL KD+ +++T+ +E + + GY+P GARPLRRAI R +ED ++EK+L E GD
Sbjct: 744 ERLADKDMAIELTQDAKELLAKRGYDPVLGARPLRRAIQREIEDVISEKILYGEFAAGDI 803
Query: 663 VIVDVD 668
+ VDVD
Sbjct: 804 IEVDVD 809
>gi|297192907|ref|ZP_06910305.1| ATP-dependent Clp protease [Streptomyces pristinaespiralis ATCC
25486]
gi|197722625|gb|EDY66533.1| ATP-dependent Clp protease [Streptomyces pristinaespiralis ATCC
25486]
Length = 841
Score = 791 bits (2044), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/667 (59%), Positives = 519/667 (77%), Gaps = 16/667 (2%)
Query: 10 GAGVGGGSSGNKMPTL--EEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPC 67
A GG + G +L +++G NLT+ A E KLDPV+GR+ +IERV+Q+L RRTKNNP
Sbjct: 150 AATAGGPAEGTPSTSLVLDQFGRNLTQAARESKLDPVIGREKEIERVMQVLSRRTKNNPV 209
Query: 68 LIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLM 127
LIGEPGVGKTA+ EGLAQ I G+VP+T++ K + TLD+G LVAG++YRG+FEERLKK++
Sbjct: 210 LIGEPGVGKTAVVEGLAQAIVKGEVPETLKDKHLYTLDLGALVAGSRYRGDFEERLKKVL 269
Query: 128 EEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIE 187
+EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEYRKH+E
Sbjct: 270 KEIRTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIGATTLDEYRKHLE 329
Query: 188 KDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDR 247
KD ALERRFQP++V EPS+ TI+ILKGLR+RYE HH++ TDEALV AA L+ +YISDR
Sbjct: 330 KDAALERRFQPIQVAEPSLPHTIEILKGLRDRYEAHHRVSITDEALVQAATLADRYISDR 389
Query: 248 FLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDR 307
FLPDKAIDLIDEAGSR+R+R P + RE ++++ + ++K A+ QDFEKA LRD+
Sbjct: 390 FLPDKAIDLIDEAGSRMRIRRMTAPPDLREFDEKIAGVRRDKESAIDSQDFEKAASLRDK 449
Query: 308 EMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKVSTDES 364
E L A K + E +AGD+ VV EVD I +++ TGIPV K++ +ES
Sbjct: 450 EKQLLA--------AKAKREKEWKAGDM-DVVAEVDGELIAEVLATATGIPVFKLTEEES 500
Query: 365 DRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAK 424
RLL+ME+ LHKRVIGQ +A+KA+S+AIRR R GLK+P RP SFIF+GP+GVGK+EL+K
Sbjct: 501 SRLLRMEDELHKRVIGQKDAIKALSQAIRRTRAGLKDPKRPGGSFIFAGPSGVGKTELSK 560
Query: 425 ALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLF 484
LA + FG E+A+I LDMSEF E+HTVS+L GSPPGYVGY EGGQLTE VRR+P++VVLF
Sbjct: 561 TLAEFLFGDEDALISLDMSEFSEKHTVSRLFGSPPGYVGYEEGGQLTEKVRRKPFSVVLF 620
Query: 485 DEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDL 544
DE+EKAHPD+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N+G+ I K G +GF
Sbjct: 621 DEVEKAHPDIFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNLGTRDISK-GFNLGFAA 679
Query: 545 DYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDR 604
D K S+Y+R+K V EELKQ+FRPEFLNR+D+ +VF QLT+ ++ +I D+M+ +V +R
Sbjct: 680 QGDVK-SNYDRMKVKVNEELKQHFRPEFLNRVDDTVVFHQLTEEDIIQIVDLMIAKVDER 738
Query: 605 LKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVI 664
LK +D+ L+++ + + ++GY+P GARPLRR I R +ED ++EK+L E++ G V+
Sbjct: 739 LKDRDMGLELSATAKSLLAKKGYDPVLGARPLRRTIQREIEDILSEKILFGELRPGHIVV 798
Query: 665 VDVDSDG 671
VD + +G
Sbjct: 799 VDTEGEG 805
>gi|75760630|ref|ZP_00740659.1| Negative regulator of genetic competence clpC/mecB [Bacillus
thuringiensis serovar israelensis ATCC 35646]
gi|228898835|ref|ZP_04063117.1| Negative regulator of genetic competence [Bacillus thuringiensis
IBL 4222]
gi|434378724|ref|YP_006613368.1| negative regulator of genetic competence ClpC/MecB [Bacillus
thuringiensis HD-789]
gi|74491873|gb|EAO55060.1| Negative regulator of genetic competence clpC/mecB [Bacillus
thuringiensis serovar israelensis ATCC 35646]
gi|228860735|gb|EEN05113.1| Negative regulator of genetic competence [Bacillus thuringiensis
IBL 4222]
gi|401877281|gb|AFQ29448.1| negative regulator of genetic competence ClpC/MecB [Bacillus
thuringiensis HD-789]
Length = 811
Score = 791 bits (2044), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/669 (59%), Positives = 521/669 (77%), Gaps = 9/669 (1%)
Query: 5 STEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKN 64
S EA GG ++ PTL+ +LT +A E +LDPV+GR +I+RV+++L RRTKN
Sbjct: 144 SNEASSGHQGGSATNANTPTLDSLARDLTVVARENRLDPVIGRGKEIQRVIEVLSRRTKN 203
Query: 65 NPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLK 124
NP LIGEPGVGKTAIAEGLAQ+I + +VP+T+ K+V+TLDMG +VAGTKYRGEFE+RLK
Sbjct: 204 NPVLIGEPGVGKTAIAEGLAQQIVNNEVPETLRDKRVMTLDMGTVVAGTKYRGEFEDRLK 263
Query: 125 KLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRK 184
K+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTLDEYRK
Sbjct: 264 KVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEYRK 323
Query: 185 HIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYI 244
+IEKD ALERRFQP+ V EPS++E+IQILKGLR+RYE HH++ TD+A+ +A +LS +YI
Sbjct: 324 YIEKDAALERRFQPIHVDEPSLEESIQILKGLRDRYEAHHRVSITDDAIDAAVKLSDRYI 383
Query: 245 SDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGEL 304
+DRFLPDKAIDLIDEA S+VRLR P +ELE +L +I KEK+ AV+ Q+FEKA L
Sbjct: 384 TDRFLPDKAIDLIDEAASKVRLRSYTTPPNLKELEVKLEEIRKEKDAAVQSQEFEKAASL 443
Query: 305 RDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDES 364
RD E L+ ++ + KE E VT DI ++VS WT IPV K++ E+
Sbjct: 444 RDMEQRLREKLEDTKRQWKEQQGKENSE------VTVEDIANVVSTWTRIPVSKLAQTET 497
Query: 365 DRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAK 424
D+LL +E LH R+IGQDEAV A+++A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+
Sbjct: 498 DKLLNLESILHDRLIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELAR 557
Query: 425 ALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLF 484
ALA FG E+AMIR+DMSE+ME+H+ S+L+GSPPGYVGY EGGQLTE VRR+PY+VVL
Sbjct: 558 ALAESMFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPYSVVLL 617
Query: 485 DEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDL 544
DE+EKAHPDVFN++LQ+LEDGRLTDSKGRTVDF+NT++IMTSNVG+ +++ + +GF++
Sbjct: 618 DEVEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTIVIMTSNVGAEALKR-NKHLGFNV 676
Query: 545 DYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDR 604
+ +D Y+ +K V +ELK+ FRPEFLNR+DE+IVF L K ++EI +M+ ++ +R
Sbjct: 677 QDESRD--YSDMKGKVMDELKKAFRPEFLNRIDEIIVFHMLEKKHIQEIVTLMVNQLVNR 734
Query: 605 LKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVI 664
LK ++IEL +TE + ++G++ YGARPLRRAI + +ED ++E++L I++G VI
Sbjct: 735 LKEQEIELHLTEEAISAIADKGFDREYGARPLRRAIQKHVEDRLSEELLKGAIEKGQKVI 794
Query: 665 VDVDSDGNV 673
DV+ + V
Sbjct: 795 FDVEGESFV 803
>gi|423421752|ref|ZP_17398841.1| chaperone ClpB [Bacillus cereus BAG3X2-1]
gi|401096871|gb|EJQ04908.1| chaperone ClpB [Bacillus cereus BAG3X2-1]
Length = 811
Score = 791 bits (2044), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 398/669 (59%), Positives = 520/669 (77%), Gaps = 9/669 (1%)
Query: 5 STEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKN 64
S EA GG S+ PTL+ +LT +A E +LDPV+GR +I+RV+++L RRTKN
Sbjct: 144 SNEASSGHQGGSSTNANTPTLDSLARDLTVVARENRLDPVIGRSKEIQRVIEVLSRRTKN 203
Query: 65 NPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLK 124
NP LIGEPGVGKTAIAEGLAQ+I + +VP+T+ K+V+TLDMG +VAGTKYRGEFE+RLK
Sbjct: 204 NPVLIGEPGVGKTAIAEGLAQQIVNNEVPETLRDKRVMTLDMGTVVAGTKYRGEFEDRLK 263
Query: 125 KLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRK 184
K+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTLDEYRK
Sbjct: 264 KVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEYRK 323
Query: 185 HIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYI 244
+IEKD ALERRFQP+ V EPS++E+IQILKGLR+RYE HH++ TD+A+ +A +LS +YI
Sbjct: 324 YIEKDAALERRFQPIHVDEPSLEESIQILKGLRDRYEAHHRVSITDDAIDAAVKLSDRYI 383
Query: 245 SDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGEL 304
+DRFLPDKAIDLIDEA S+VRLR P +ELE +L +I KEK+ AV+ Q+FEKA L
Sbjct: 384 TDRFLPDKAIDLIDEAASKVRLRSYTTPPNLKELEVKLEEIRKEKDAAVQSQEFEKAASL 443
Query: 305 RDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDES 364
RD E L+ ++ + KE E VT DI ++VS WT IPV K++ E+
Sbjct: 444 RDMEQRLREKLEDTKRQWKEQQGKENSE------VTVEDIANVVSTWTRIPVSKLAQTET 497
Query: 365 DRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAK 424
D+LL +E LH R+IGQDEAV A+++A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+
Sbjct: 498 DKLLNLESILHDRLIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELAR 557
Query: 425 ALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLF 484
ALA FG E+AMIR+DMSE+ME+H+ S+L+GSPPGYVGY EGGQLTE VRR+PY+VVL
Sbjct: 558 ALAESMFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPYSVVLL 617
Query: 485 DEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDL 544
DE+EKAHPDVFN++LQ+LEDGRLTDSKGRTVDF+NT++IMTSNVG+ +++ + +GF++
Sbjct: 618 DEVEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTIVIMTSNVGADALKR-NKHLGFNV 676
Query: 545 DYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDR 604
+ +D Y+ +K V +ELK+ FRPEFLNR+DE+IVF L K ++EI +M+ ++ R
Sbjct: 677 QDESRD--YSDMKGKVMDELKKAFRPEFLNRIDEIIVFHMLEKKHIQEIVTLMVNQLVKR 734
Query: 605 LKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVI 664
LK ++IEL +TE + ++G++ YGARPLRRAI + +ED ++E++L I++G VI
Sbjct: 735 LKEQEIELHLTEGAIAAIADKGFDREYGARPLRRAIQKHVEDRLSEELLKGAIEKGQKVI 794
Query: 665 VDVDSDGNV 673
DV+ + V
Sbjct: 795 FDVEGESFV 803
>gi|398303898|ref|ZP_10507484.1| genetic competence negative regulator ClpC/MecB [Bacillus
vallismortis DV1-F-3]
Length = 810
Score = 791 bits (2044), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/667 (59%), Positives = 519/667 (77%), Gaps = 10/667 (1%)
Query: 9 VGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCL 68
G+ G +S PTL+ +LT +A+E LDPV+GR +I+RV+++L RRTKNNP L
Sbjct: 147 TGSSATGTNSNANTPTLDSLARDLTAIAKEDSLDPVIGRSKEIQRVIEVLSRRTKNNPVL 206
Query: 69 IGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLME 128
IGEPGVGKTAIAEGLAQ+I + +VP+ + K+V+TLDMG +VAGTKYRGEFE+RLKK+M+
Sbjct: 207 IGEPGVGKTAIAEGLAQQIINNEVPEILRDKRVMTLDMGTVVAGTKYRGEFEDRLKKVMD 266
Query: 129 EIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEK 188
EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTLDEYRK+IEK
Sbjct: 267 EIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEYRKYIEK 326
Query: 189 DPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRF 248
D ALERRFQP++V +PS DE+IQIL+GLR+RYE HH++ TD+A+ +A +LS +YISDRF
Sbjct: 327 DAALERRFQPIQVDQPSADESIQILQGLRDRYEAHHRVSITDDAIEAAVKLSDRYISDRF 386
Query: 249 LPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDRE 308
LPDKAIDLIDEAGS+VRLR P +ELE++L ++ KEK+ AV+ Q+FEKA LRD E
Sbjct: 387 LPDKAIDLIDEAGSKVRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFEKAASLRDTE 446
Query: 309 MDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLL 368
L+ Q+ KE + G VT DI +V++WTG+PV K++ E+D+LL
Sbjct: 447 QRLREQVEDTKKSWKE------KQGQENSEVTVDDIAMVVASWTGVPVSKIAQTETDKLL 500
Query: 369 KMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAA 428
ME LH RVIGQDEAV A+++A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+ALA
Sbjct: 501 NMESILHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAE 560
Query: 429 YYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIE 488
FG EEAMIR+DMSE+ME+H+ S+L+GSPPGYVGY EGGQLTE VRR+PY+VVL DEIE
Sbjct: 561 SIFGDEEAMIRIDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPYSVVLLDEIE 620
Query: 489 KAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDE 548
KAHPDVFN++LQ+LEDGRLTDSKGRTVDF+NT+LIMTSNVG+S +++ + +GF++ +
Sbjct: 621 KAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTILIMTSNVGASELKR-NKYVGFNV--QD 677
Query: 549 KDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTK 608
+ ++ +K V ELK+ FRPEF+NR+DE+IVF L K + EI +M ++ RLK +
Sbjct: 678 ETQNHKDMKDKVMGELKRAFRPEFINRIDEIIVFHSLEKKHLTEIVSLMSDQLTKRLKEQ 737
Query: 609 DIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVD 668
D+ +++T+ + +V EEG + YGARPLRRAI + +ED ++E++L I +G +++DV+
Sbjct: 738 DLSIELTDAAKAKVAEEGVDLEYGARPLRRAIQKHVEDRLSEELLRGNIHKGQHIVLDVE 797
Query: 669 SDGNVTV 675
DG V
Sbjct: 798 -DGEFVV 803
>gi|297201430|ref|ZP_06918827.1| ATP-dependent chaperone ClpB [Streptomyces sviceus ATCC 29083]
gi|197713837|gb|EDY57871.1| ATP-dependent chaperone ClpB [Streptomyces sviceus ATCC 29083]
Length = 841
Score = 791 bits (2044), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/687 (57%), Positives = 528/687 (76%), Gaps = 16/687 (2%)
Query: 11 AGVGGGSSGNKMPTL--EEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCL 68
A GG + G +L +++G NLT+ A E KLDPV+GR+ +IERV+Q+L RRTKNNP L
Sbjct: 151 ATAGGPAEGTPSTSLVLDQFGRNLTQAARESKLDPVIGREKEIERVMQVLSRRTKNNPVL 210
Query: 69 IGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLME 128
IGEPGVGKTA+ EGLAQ I G+VP+T++ K + TLD+G LVAG++YRG+FEERLKK+++
Sbjct: 211 IGEPGVGKTAVVEGLAQAIVKGEVPETLKDKHLYTLDLGALVAGSRYRGDFEERLKKVLK 270
Query: 129 EIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEK 188
EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEYRKH+EK
Sbjct: 271 EIRTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIGATTLDEYRKHLEK 330
Query: 189 DPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRF 248
D ALERRFQP++V EPS+ TI+ILKGLR+RYE HH++ TDEALV AA L+ +YISDRF
Sbjct: 331 DAALERRFQPIQVAEPSLPHTIEILKGLRDRYEAHHRVSITDEALVQAATLADRYISDRF 390
Query: 249 LPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDRE 308
LPDKAIDLIDEAGSR+R+R P + RE ++++ + ++K A+ QDFEKA LRD+E
Sbjct: 391 LPDKAIDLIDEAGSRMRIRRMTAPPDLREFDEKIAGVRRDKESAIDSQDFEKAASLRDKE 450
Query: 309 MDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKVSTDESD 365
L A K + E +AGD+ VV EVD I +++ TGIPV K++ +ES
Sbjct: 451 KQLLA--------AKAKREKEWKAGDM-DVVAEVDGELIAEVLATATGIPVFKLTEEESS 501
Query: 366 RLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKA 425
RLL+ME+ LHKRVIGQ +AVKA+S+AIRR R GLK+P RP SFIF+GP+GVGK+EL+KA
Sbjct: 502 RLLRMEDELHKRVIGQVDAVKALSKAIRRTRAGLKDPKRPGGSFIFAGPSGVGKTELSKA 561
Query: 426 LAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFD 485
LA + FG E+A+I LDMSEF E+HTVS+L GSPPGYVGY EGGQLTE VRR+P++VVLFD
Sbjct: 562 LAEFLFGDEDALISLDMSEFSEKHTVSRLFGSPPGYVGYEEGGQLTEKVRRKPFSVVLFD 621
Query: 486 EIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLD 545
E+EKAHPD+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N+G+ I K G +GF
Sbjct: 622 EVEKAHPDIFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNLGTRDISK-GFNLGFAAS 680
Query: 546 YDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRL 605
D+K ++Y R+K+ V++ELKQ+FRPEFLNR+D+++VF QLT+ ++ I D+M+ +V +RL
Sbjct: 681 GDKK-TNYERMKNKVSDELKQHFRPEFLNRVDDVVVFPQLTQEDILAIVDLMIAKVDERL 739
Query: 606 KTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIV 665
+ +D+ +++++ +E + +GY+ GARPLRR I R +ED+++EK+L E++ G V+V
Sbjct: 740 RDRDMGIELSQSAKELLSTKGYDQVLGARPLRRTIQREIEDTLSEKILFGELRPGHIVVV 799
Query: 666 DVDSDGNVTVLNGSSGAPESLADPLPV 692
D + +G +L D P+
Sbjct: 800 DTEGEGETKTFTFRGEEKAALPDVPPI 826
>gi|269793011|ref|YP_003317915.1| ATPase AAA-2 domain-containing protein [Thermanaerovibrio
acidaminovorans DSM 6589]
gi|269100646|gb|ACZ19633.1| ATPase AAA-2 domain protein [Thermanaerovibrio acidaminovorans DSM
6589]
Length = 819
Score = 791 bits (2044), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 383/661 (57%), Positives = 521/661 (78%), Gaps = 12/661 (1%)
Query: 16 GSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVG 75
G+ +K PTL++ G +L+++A+ G+LDPV+GR +I+R+VQ+L RRTKNNP LIG+PGVG
Sbjct: 164 GAQASKTPTLDQLGMDLSEMAKSGELDPVIGRAKEIQRLVQVLSRRTKNNPVLIGDPGVG 223
Query: 76 KTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDE 135
KTAI EGLAQRIASGD+P+ ++GK+V+ L++G LVAGTKYRGEFEER++KL++E+K+S
Sbjct: 224 KTAIVEGLAQRIASGDIPEVLKGKRVVQLNVGNLVAGTKYRGEFEERMRKLVKELKESRS 283
Query: 136 IILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERR 195
+ILFIDE+HT++GAG AEGA+DAANILKPSLARGE Q IGATT++EYRK+IEKD ALERR
Sbjct: 284 VILFIDEIHTIVGAGGAEGAVDAANILKPSLARGEFQVIGATTMEEYRKYIEKDAALERR 343
Query: 196 FQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAID 255
FQP++V EPS ++T++IL+GLR+RYE HH+++ +D+ALV+AA+LS ++I++RFLPDKAID
Sbjct: 344 FQPIQVEEPSEEDTVKILEGLRDRYEAHHRVKISDDALVAAARLSKRFITERFLPDKAID 403
Query: 256 LIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQI 315
LIDEAG+R RL+ + PE+ +ELE+ L ++ KEK AV Q+FEKA LRD E + +I
Sbjct: 404 LIDEAGARARLKTMEAPEDLKELERRLEEVRKEKESAVMAQEFEKAAALRDEERRMYEEI 463
Query: 316 SALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLH 375
L + E PVVT D+ IVS WTG+PV +++ +E+ RLL+MEE +H
Sbjct: 464 EQLRRDWQSRRNQEE------PVVTGEDVATIVSEWTGVPVVQLTEEEAKRLLRMEEEIH 517
Query: 376 KRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEE 435
R++GQ+EAV A++RAIRR R GLK+P RP+ SF+F GPTGVGK+ELA+ LA + FGSE+
Sbjct: 518 SRLVGQEEAVNAVARAIRRGRSGLKDPRRPVGSFLFLGPTGVGKTELARRLAWFLFGSED 577
Query: 436 AMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVF 495
AMIR DMSEFMERH V+KLIG+PPGYVG+ EGG+LTEAVRRRPY+V+LFDEIEKAHPDVF
Sbjct: 578 AMIRFDMSEFMERHEVAKLIGAPPGYVGHEEGGKLTEAVRRRPYSVILFDEIEKAHPDVF 637
Query: 496 NMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR-RIGFDL-DYDEKDSSY 553
N++LQ+LEDGRLTD +G V+F+NT++IMTSNVG+S +G R +GF D D+ + +
Sbjct: 638 NILLQLLEDGRLTDGQGHLVNFRNTVIIMTSNVGAS---EGTRSHLGFSSGDEDQAMAGW 694
Query: 554 NRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQ 613
+R + + + +K+ FRPEFLNR+DEM+VFR L + E+++IA +ML EV R + I L
Sbjct: 695 DRTRGAIMDAVKRTFRPEFLNRVDEMVVFRPLKREELRQIAAMMLDEVVARCGERGISLA 754
Query: 614 VTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNV 673
V + ERV++EG++P +GARPLRR I R+ ED +++ ML ++ +G V V DG V
Sbjct: 755 VDPQVVERVLDEGFDPKFGARPLRRTIQRMTEDPLSDMMLEGKVPQGARVEA-VMEDGRV 813
Query: 674 T 674
+
Sbjct: 814 S 814
>gi|435852942|ref|YP_007314261.1| ATPase with chaperone activity, ATP-binding subunit
[Halobacteroides halobius DSM 5150]
gi|433669353|gb|AGB40168.1| ATPase with chaperone activity, ATP-binding subunit
[Halobacteroides halobius DSM 5150]
Length = 811
Score = 791 bits (2043), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 379/655 (57%), Positives = 518/655 (79%), Gaps = 7/655 (1%)
Query: 12 GVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGE 71
G G SG L++Y +LT+LA EGKLDPV+GR +I+RV+QIL RR KNNP LIGE
Sbjct: 153 GYGKYKSGRHKGKLDQYSRDLTQLAAEGKLDPVIGRNKEIKRVIQILSRRRKNNPVLIGE 212
Query: 72 PGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIK 131
PGVGKTAIAEGLAQRIA +VP+T+ K+++ LD+ ++AG+KYRGEFE+RLK +M+EI
Sbjct: 213 PGVGKTAIAEGLAQRIAEEEVPETLVNKRILALDLSSMLAGSKYRGEFEKRLKAIMKEIS 272
Query: 132 QSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPA 191
+S ++ILFIDE+H L+GAG AEGAIDAANILKP+LARGELQ IGATTLDEYRKH+E+D A
Sbjct: 273 ESGDVILFIDELHNLVGAGGAEGAIDAANILKPALARGELQTIGATTLDEYRKHVEEDAA 332
Query: 192 LERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPD 251
LERRFQ + V EP++++T++ILKGLR+ YE HH+++ TD+A+++AA+LS++YI+DRFLPD
Sbjct: 333 LERRFQSILVEEPTIEDTVKILKGLRDVYEAHHRVKITDDAIMAAAELSHRYINDRFLPD 392
Query: 252 KAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDL 311
KAIDLIDE+GS+ RL+ P E ++L K+L +I +EK A+ Q+FE+A +LRD+E +
Sbjct: 393 KAIDLIDESGSQARLQENTAPNELKQLSKKLERIEQEKEAAIEAQEFEEAADLRDQEQQI 452
Query: 312 KAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKME 371
K Q+ + + K E G V+T+ +I IVS WTG+PV K++ +ES+RLL +E
Sbjct: 453 KDQLEEIKTEWK------NEKGMNETVITKENIAEIVSDWTGVPVTKLAQEESERLLNLE 506
Query: 372 ETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYF 431
LH+RV+GQDEAV+++++AIRRAR GLK+P RPI SFIF GPTGVGK+ELAK LA F
Sbjct: 507 AELHERVVGQDEAVESVAQAIRRARAGLKDPKRPIGSFIFLGPTGVGKTELAKTLAESMF 566
Query: 432 GSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAH 491
E+AMIR+DMSE+ME+H VS+L+G+PPGYVG+ EGGQLTE VRRRPY+V+L DEIEKAH
Sbjct: 567 DDEDAMIRVDMSEYMEKHAVSRLVGAPPGYVGHDEGGQLTEEVRRRPYSVILLDEIEKAH 626
Query: 492 PDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDS 551
P+VFN++LQ+LEDG+LTD++GRTVDFKNT++IMTSNVG+ +I+ +GF + D+
Sbjct: 627 PEVFNVLLQLLEDGQLTDAQGRTVDFKNTVVIMTSNVGADLIQNNTGGLGFK-SPENIDT 685
Query: 552 SYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIE 611
Y +K V ++K FRPEFLNRLDE+IVF LT+ E+KEI D ML+++ +R+ KD++
Sbjct: 686 EYEDMKEKVMGKMKDTFRPEFLNRLDEIIVFHSLTEEEIKEIVDFMLQDLEERIINKDLK 745
Query: 612 LQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVD 666
L VTE +E + E+GY+ +GARPLRR I R++E+ ++E++LA + +EGD++ ++
Sbjct: 746 LDVTEPAKELLAEKGYDKEFGARPLRRTIRRMIENPLSERLLAGKFEEGDTIKIN 800
>gi|218895217|ref|YP_002443628.1| negative regulator of genetic competence ClpC/MecB [Bacillus cereus
G9842]
gi|228905879|ref|ZP_04069776.1| Negative regulator of genetic competence [Bacillus thuringiensis
IBL 200]
gi|228963182|ref|ZP_04124351.1| Negative regulator of genetic competence [Bacillus thuringiensis
serovar sotto str. T04001]
gi|402562827|ref|YP_006605551.1| negative regulator of genetic competence ClpC/MecB [Bacillus
thuringiensis HD-771]
gi|423364494|ref|ZP_17341984.1| chaperone ClpB [Bacillus cereus VD022]
gi|423565560|ref|ZP_17541836.1| chaperone ClpB [Bacillus cereus MSX-A1]
gi|218542156|gb|ACK94550.1| negative regulator of genetic competence ClpC/MecB [Bacillus cereus
G9842]
gi|228796440|gb|EEM43879.1| Negative regulator of genetic competence [Bacillus thuringiensis
serovar sotto str. T04001]
gi|228853694|gb|EEM98454.1| Negative regulator of genetic competence [Bacillus thuringiensis
IBL 200]
gi|401072913|gb|EJP81367.1| chaperone ClpB [Bacillus cereus VD022]
gi|401193762|gb|EJR00765.1| chaperone ClpB [Bacillus cereus MSX-A1]
gi|401791479|gb|AFQ17518.1| negative regulator of genetic competence ClpC/MecB [Bacillus
thuringiensis HD-771]
Length = 811
Score = 791 bits (2043), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/669 (59%), Positives = 521/669 (77%), Gaps = 9/669 (1%)
Query: 5 STEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKN 64
S EA GG ++ PTL+ +LT +A E +LDPV+GR +I+RV+++L RRTKN
Sbjct: 144 SNEASSGHQGGSATNANTPTLDSLARDLTVVARENRLDPVIGRGKEIQRVIEVLSRRTKN 203
Query: 65 NPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLK 124
NP LIGEPGVGKTAIAEGLAQ+I + +VP+T+ K+V+TLDMG +VAGTKYRGEFE+RLK
Sbjct: 204 NPVLIGEPGVGKTAIAEGLAQQIVNNEVPETLRDKRVMTLDMGTVVAGTKYRGEFEDRLK 263
Query: 125 KLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRK 184
K+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTLDEYRK
Sbjct: 264 KVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEYRK 323
Query: 185 HIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYI 244
+IEKD ALERRFQP+ V EPS++E+IQILKGLR+RYE HH++ TD+A+ +A +LS +YI
Sbjct: 324 YIEKDAALERRFQPIHVDEPSLEESIQILKGLRDRYEAHHRVSITDDAIDAAVKLSDRYI 383
Query: 245 SDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGEL 304
+DRFLPDKAIDLIDEA S+VRLR P +ELE +L +I KEK+ AV+ Q+FEKA L
Sbjct: 384 TDRFLPDKAIDLIDEAASKVRLRSYTTPPNLKELEVKLEEIRKEKDAAVQSQEFEKAASL 443
Query: 305 RDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDES 364
RD E L+ ++ + KE E VT DI ++VS WT IPV K++ E+
Sbjct: 444 RDMEQRLREKLEDTKRQWKEQQGKENSE------VTVEDIANVVSTWTRIPVSKLAQTET 497
Query: 365 DRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAK 424
D+LL +E LH R+IGQDEAV A+++A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+
Sbjct: 498 DKLLNLESILHDRLIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELAR 557
Query: 425 ALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLF 484
ALA FG E+AMIR+DMSE+ME+H+ S+L+GSPPGYVGY EGGQLTE VRR+PY+VVL
Sbjct: 558 ALAESMFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPYSVVLL 617
Query: 485 DEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDL 544
DE+EKAHPDVFN++LQ+LEDGRLTDSKGRTVDF+NT++IMTSNVG+ +++ + +GF++
Sbjct: 618 DEVEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTIVIMTSNVGAEALKR-NKHLGFNV 676
Query: 545 DYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDR 604
+ +D Y+ +K V +ELK+ FRPEFLNR+DE+IVF L K ++EI +M+ ++ +R
Sbjct: 677 QDESRD--YSDMKGKVMDELKKAFRPEFLNRIDEIIVFHMLEKKHIQEIVTLMVNQLVNR 734
Query: 605 LKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVI 664
LK ++IEL +TE + ++G++ YGARPLRRAI + +ED ++E++L I++G VI
Sbjct: 735 LKEQEIELHLTEGAISAIADKGFDREYGARPLRRAIQKHVEDRLSEELLKGAIEKGQKVI 794
Query: 665 VDVDSDGNV 673
DV+ + V
Sbjct: 795 FDVEGESFV 803
>gi|254393706|ref|ZP_05008829.1| ATP-dependent Clp protease [Streptomyces clavuligerus ATCC 27064]
gi|294813216|ref|ZP_06771859.1| Clp-family ATP-binding protease [Streptomyces clavuligerus ATCC
27064]
gi|326441673|ref|ZP_08216407.1| putative ATP-dependent Clp protease [Streptomyces clavuligerus ATCC
27064]
gi|197707316|gb|EDY53128.1| ATP-dependent Clp protease [Streptomyces clavuligerus ATCC 27064]
gi|294325815|gb|EFG07458.1| Clp-family ATP-binding protease [Streptomyces clavuligerus ATCC
27064]
Length = 841
Score = 791 bits (2043), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 398/676 (58%), Positives = 521/676 (77%), Gaps = 16/676 (2%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTL--EEYGTNLTKLAEEGKLDPVVGRQPQIERVVQIL 58
+ G S A GG + G +L +++G NLT+ A E KLDPV+GR+ +IERV+Q+L
Sbjct: 142 LSGYSGGKEAATAGGPAEGTPSTSLVLDQFGRNLTQAARESKLDPVIGREKEIERVMQVL 201
Query: 59 GRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGE 118
RRTKNNP LIGEPGVGKTA+ EGLAQ I G+VP+T++ K + TLD+G LVAG++YRG+
Sbjct: 202 SRRTKNNPVLIGEPGVGKTAVVEGLAQAIVKGEVPETLKDKHLYTLDLGALVAGSRYRGD 261
Query: 119 FEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATT 178
FEERLKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATT
Sbjct: 262 FEERLKKVLKEIRTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIGATT 321
Query: 179 LDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQ 238
LDEYRKH+EKD ALERRFQP++V EPS+ TI+ILKGLR+RYE HH++ TDEALV AA
Sbjct: 322 LDEYRKHLEKDAALERRFQPIQVAEPSLPHTIEILKGLRDRYEAHHRVSITDEALVQAAT 381
Query: 239 LSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDF 298
L+ +YISDRFLPDKAIDLIDEAGSR+R+R P + RE ++++ + ++K A+ QDF
Sbjct: 382 LADRYISDRFLPDKAIDLIDEAGSRMRIRRMTAPPDLREFDEKIAGVRRDKESAIDSQDF 441
Query: 299 EKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIP 355
EKA LRD+E L A K + E +AGD+ VV EVD I +++ TGIP
Sbjct: 442 EKAASLRDKEKQLLA--------AKAKREKEWKAGDMD-VVAEVDGELIAEVLATATGIP 492
Query: 356 VEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPT 415
V K++ +ES RLL+ME+ LHKRVIGQ +A+KA+S+AIRR R GLK+P RP SFIF+GP+
Sbjct: 493 VFKLTEEESSRLLRMEDELHKRVIGQKDAIKALSQAIRRTRAGLKDPKRPGGSFIFAGPS 552
Query: 416 GVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVR 475
GVGK+EL+K LA + FG E+A+I LDMSEF E+HTVS+L GSPPGYVGY EGGQLTE VR
Sbjct: 553 GVGKTELSKTLAEFLFGDEDALISLDMSEFSEKHTVSRLFGSPPGYVGYEEGGQLTEKVR 612
Query: 476 RRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEK 535
R+P++VVLFDE+EKAHPD+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N+G+ I K
Sbjct: 613 RKPFSVVLFDEVEKAHPDIFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNLGTRDISK 672
Query: 536 GGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIAD 595
G +GF D K + Y R+K+ V EELKQ+FRPEFLNR+D+ +VF QLT+ ++ +I D
Sbjct: 673 -GFNLGFAAQGDVK-TGYERMKAKVNEELKQHFRPEFLNRVDDTVVFHQLTEEDIIQIVD 730
Query: 596 IMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAR 655
+M+ +V +RLK +D+ L+++ + + ++GY+P GARPLRR I R +ED ++EK+L
Sbjct: 731 LMIAKVDERLKDRDMGLELSATAKSLLAKKGYDPVLGARPLRRTIQREIEDILSEKILFG 790
Query: 656 EIKEGDSVIVDVDSDG 671
E++ G V+VD D +G
Sbjct: 791 ELRPGHIVVVDTDGEG 806
>gi|423480226|ref|ZP_17456916.1| chaperone ClpB [Bacillus cereus BAG6X1-2]
gi|401149231|gb|EJQ56706.1| chaperone ClpB [Bacillus cereus BAG6X1-2]
Length = 811
Score = 791 bits (2042), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/669 (59%), Positives = 522/669 (78%), Gaps = 9/669 (1%)
Query: 5 STEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKN 64
S EA GG S+ PTL+ +LT +A E +LDPV+GR +I+RV+++L RRTKN
Sbjct: 144 SNEASSGHQGGSSTNANTPTLDSLARDLTVVARENRLDPVIGRSKEIQRVIEVLSRRTKN 203
Query: 65 NPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLK 124
NP LIGEPGVGKTAIAEGLAQ+I + +VP+T+ K+V+TLDMG +VAGTKYRGEFE+RLK
Sbjct: 204 NPVLIGEPGVGKTAIAEGLAQQIVNNEVPETLRDKRVMTLDMGTVVAGTKYRGEFEDRLK 263
Query: 125 KLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRK 184
K+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTLDEYRK
Sbjct: 264 KVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEYRK 323
Query: 185 HIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYI 244
+IEKD ALERRFQP+ V EP+++E++QILKGLR+RYE HH++ TD+A+ +A +LS +YI
Sbjct: 324 YIEKDAALERRFQPIHVDEPNLEESVQILKGLRDRYEAHHRVSITDDAIDAAVKLSDRYI 383
Query: 245 SDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGEL 304
+DRFLPDKAIDLIDEA S+VRLR P +ELE +L +I KEK+ AV+ Q+FEKA L
Sbjct: 384 TDRFLPDKAIDLIDEAASKVRLRSYTTPPNLKELEVKLEEIRKEKDAAVQSQEFEKAASL 443
Query: 305 RDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDES 364
RD E L+ ++ + KE + G VT DI ++VS WT IPV K++ E+
Sbjct: 444 RDMEQRLREKLEDTKRQWKE------KQGQENSEVTVEDIANVVSTWTRIPVSKLAQTET 497
Query: 365 DRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAK 424
D+LL +E LH R+IGQDEAV A+++A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+
Sbjct: 498 DKLLNLESILHDRLIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELAR 557
Query: 425 ALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLF 484
ALA FG E+AMIR+DMSE+ME+H+ S+L+GSPPGYVGY EGGQLTE VRR+PY+VVL
Sbjct: 558 ALAESMFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPYSVVLL 617
Query: 485 DEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDL 544
DE+EKAHPDVFN++LQ+LEDGRLTDSKGRTVDF+NT++IMTSNVG+ +++ + +GF++
Sbjct: 618 DEVEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTIVIMTSNVGADALKR-NKHLGFNV 676
Query: 545 DYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDR 604
+ +D Y+ +K V +ELK+ FRPEFLNR+DE+IVF L K ++EI +M+ ++ +R
Sbjct: 677 QDESRD--YSDMKGKVMDELKKAFRPEFLNRIDEIIVFHMLEKKHIQEIVTLMVNQLVNR 734
Query: 605 LKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVI 664
LK ++IEL +TE + ++G++ YGARPLRRAI + +ED ++E++L I++G VI
Sbjct: 735 LKEQEIELHLTEGAISAIADKGFDREYGARPLRRAIQKHVEDRLSEELLKGAIEKGQKVI 794
Query: 665 VDVDSDGNV 673
DV+ + V
Sbjct: 795 FDVEGESFV 803
>gi|354558410|ref|ZP_08977665.1| ATPase AAA-2 domain protein [Desulfitobacterium metallireducens DSM
15288]
gi|353546888|gb|EHC16335.1| ATPase AAA-2 domain protein [Desulfitobacterium metallireducens DSM
15288]
Length = 823
Score = 791 bits (2042), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/666 (59%), Positives = 520/666 (78%), Gaps = 13/666 (1%)
Query: 3 GESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRT 62
G + G VG G++ PTL E+G +LT+ A EGKLDPVVGR+ ++ERV+QIL RRT
Sbjct: 153 GANAAPTGKNVGPGNT----PTLNEFGRDLTQSAREGKLDPVVGRESELERVIQILSRRT 208
Query: 63 KNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEER 122
KNNP LIGEPGVGKTAIAE LAQRI VP+T+ K+V+TLD+ +VAG+KYRGEFEER
Sbjct: 209 KNNPVLIGEPGVGKTAIAESLAQRIVQNKVPETLTNKRVVTLDISSVVAGSKYRGEFEER 268
Query: 123 LKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEY 182
LKK+MEEI+ +I+FIDE+HTLIGAGAAEGAIDAANILKP+LARGELQCIGATTLDEY
Sbjct: 269 LKKVMEEIRIDGNVIVFIDELHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEY 328
Query: 183 RKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQ 242
RK+IEKD ALERRFQP+ V EP+V++ ++ILKGLR+RYE HH+ + TDEA+ +A +LS +
Sbjct: 329 RKYIEKDAALERRFQPITVGEPTVEQAVEILKGLRDRYEAHHRTKITDEAIEAAVRLSDR 388
Query: 243 YISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAG 302
YISDRFLPDKAIDL+DEA SRVRL P + + LE+++ ++ KEK AV Q+FEKA
Sbjct: 389 YISDRFLPDKAIDLMDEAASRVRLDTFNAPPDMKSLEEQVERLKKEKEAAVLAQEFEKAA 448
Query: 303 ELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTD 362
E+RDRE +L+ D ++ S E++ VTE DI IV++WTGIPV+K++ +
Sbjct: 449 EIRDREHELRE------DLAQKRSDWESQRDVTKSSVTEDDISQIVASWTGIPVKKIAQE 502
Query: 363 ESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSEL 422
E DRLL +EETLH+RV+GQD+AV A+++A+RRAR GLK+P RPI SFIF GPTGVGK+EL
Sbjct: 503 EGDRLLHLEETLHERVVGQDDAVAAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTEL 562
Query: 423 AKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVV 482
A+ LA FG E+AMIR+DMSE+ME+H VS+L+G+PPGY+G+ EGGQLTEAVRR+PY+V+
Sbjct: 563 ARTLAEALFGEEDAMIRIDMSEYMEKHAVSRLVGAPPGYIGHDEGGQLTEAVRRKPYSVI 622
Query: 483 LFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGF 542
L DEIEKAHPDVFN++LQ+LEDGRLTD+KGRTVDF+N ++IMTSNVG+S + K +GF
Sbjct: 623 LLDEIEKAHPDVFNILLQVLEDGRLTDTKGRTVDFRNAVVIMTSNVGASFLHKEA--MGF 680
Query: 543 DLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVF 602
DE ++ Y ++ V +ELK+ FRPEFLNR+DE++VF L K + ++ +I++K+V
Sbjct: 681 AAHRDE-ETEYKNMRRNVMDELKKTFRPEFLNRVDELVVFHSLPKEALVKVTEILMKQVN 739
Query: 603 DRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDS 662
+K + LQV E + +EG +P+YGARPLRRAI RL+EDS++EK+L E K GD
Sbjct: 740 KLVKGQGFNLQVEMSALELIAKEGNDPTYGARPLRRAIQRLIEDSLSEKILQGEFKAGDQ 799
Query: 663 VIVDVD 668
+ V+ +
Sbjct: 800 IRVEAE 805
>gi|299830407|ref|YP_003734622.1| Clp protease ATP binding subunit [Kryptoperidinium foliaceum]
gi|297385109|gb|ADI40407.1| Clp protease ATP binding subunit [Kryptoperidinium foliaceum]
Length = 915
Score = 791 bits (2042), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 388/674 (57%), Positives = 511/674 (75%), Gaps = 35/674 (5%)
Query: 19 GNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTA 78
G+ PTL+EY N+TK A +G LDPV+GR+ +I+ V+ +L RRTKNNP LIGEPGVGKTA
Sbjct: 167 GSPTPTLDEYAENITKEAIDGNLDPVIGREKEIDDVIAVLARRTKNNPVLIGEPGVGKTA 226
Query: 79 IAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIIL 138
+AEGLAQ I + VPD ++G ++ LD+G ++AGTKYRGEFEERLK+++EE + +I+
Sbjct: 227 VAEGLAQLILTEKVPDFLDGSLIMALDLGSILAGTKYRGEFEERLKRIVEEAQNDSAVII 286
Query: 139 FIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQP 198
IDE+HTL+GAGAAEGA+DAANILKP+LARG+ +CIGATT DEYRK+IE+DPALERRFQP
Sbjct: 287 VIDEIHTLVGAGAAEGAVDAANILKPALARGKFRCIGATTNDEYRKYIERDPALERRFQP 346
Query: 199 VKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLID 258
V V EPSV TI+IL+GLR ++E HH L Y D+AL AA LS +Y++DR+LPDKAID++D
Sbjct: 347 VHVEEPSVGTTIEILRGLRSKFEQHHTLSYHDKALEQAAILSDKYVADRYLPDKAIDVLD 406
Query: 259 EAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQI--- 315
EAG+RVRL + +LP R L EL++ K+K E ++ DFE A +L D EM+++ I
Sbjct: 407 EAGARVRLENRRLPLGLRSLMHELQETIKDKEECIKEHDFEAAKQLLDHEMEVRTHIRIM 466
Query: 316 --SALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEET 373
SAL ++ + ++ + + +VTE D+ ++S WTGIPV K++ ES+RLLKME+T
Sbjct: 467 KQSALTNEARGFNRRDVD------MVTETDVSDVISNWTGIPVTKITGSESERLLKMEDT 520
Query: 374 LHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGS 433
+H+R+IGQ AV A+S+AIRRARVGL+NPNRPIASFIF+GPTGVGK+EL KAL+ Y F S
Sbjct: 521 IHERIIGQKHAVVAVSKAIRRARVGLRNPNRPIASFIFAGPTGVGKTELTKALSDYMFSS 580
Query: 434 EEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPD 493
E++MIRLDMSE+ME+HTV+KLIGSPPGYVGY EGGQLTEAVR +PY+VVL DE+EKAHPD
Sbjct: 581 EDSMIRLDMSEYMEKHTVAKLIGSPPGYVGYNEGGQLTEAVRSKPYSVVLLDEVEKAHPD 640
Query: 494 VFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEK----------GGRRIGFD 543
VFN++LQIL+DGRLTDSKGR +DF NTL+IMT+N+G+ +IE+ G R GF
Sbjct: 641 VFNLLLQILDDGRLTDSKGRVIDFTNTLIIMTTNLGAKIIERESGIKAKSDQGDR--GFK 698
Query: 544 LDYDE-----------KDSS-YNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVK 591
+ D KD + R+ LV EELK +FRPEFLNR+DE+IVF LT++++
Sbjct: 699 ITPDAVLGWEPVPEPIKDPELFERVAKLVNEELKNFFRPEFLNRIDEIIVFNHLTRIDIW 758
Query: 592 EIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEK 651
EI ++ +K V RLK K I L V + + +EGY+P YGARPLRRAIM+ LED++AE+
Sbjct: 759 EICELQIKSVQKRLKEKGINLIVDLAVQAFLTDEGYDPIYGARPLRRAIMKYLEDTLAEQ 818
Query: 652 MLAREIKEGDSVIV 665
L++ + +IV
Sbjct: 819 CLSKTLYPNTKIIV 832
>gi|229040987|ref|ZP_04189750.1| Negative regulator of genetic competence [Bacillus cereus AH676]
gi|228727284|gb|EEL78478.1| Negative regulator of genetic competence [Bacillus cereus AH676]
Length = 811
Score = 790 bits (2041), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/666 (59%), Positives = 518/666 (77%), Gaps = 9/666 (1%)
Query: 5 STEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKN 64
S EA GG S+ PTL+ +LT +A E +LDPV+GR +I+RV+++L RRTKN
Sbjct: 144 SNEASSGHQGGSSTNANTPTLDSLARDLTVVARENRLDPVIGRSKEIQRVIEVLSRRTKN 203
Query: 65 NPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLK 124
NP LIGEPGVGKTAIAEGLAQ+I + +VP+T+ K+V+TLDMG +VAGTKYRGEFE+RLK
Sbjct: 204 NPVLIGEPGVGKTAIAEGLAQQIVNNEVPETLRDKRVMTLDMGTVVAGTKYRGEFEDRLK 263
Query: 125 KLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRK 184
K+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTLDEYRK
Sbjct: 264 KVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEYRK 323
Query: 185 HIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYI 244
+IEKD ALERRFQP+ V EPS++E+ QILKGLR+RYE HH++ TD+A+ +A +LS +YI
Sbjct: 324 YIEKDAALERRFQPIHVDEPSLEESTQILKGLRDRYEAHHRVFITDDAIDAAVKLSDRYI 383
Query: 245 SDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGEL 304
+DRFLPDKAIDLIDEA S+VRLR P +ELE +L +I KEK+ AV+ Q+FEKA L
Sbjct: 384 TDRFLPDKAIDLIDEAASKVRLRSYTTPPNLKELEVKLEEIRKEKDAAVQSQEFEKAASL 443
Query: 305 RDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDES 364
RD E L+ ++ + KE E VT DI ++VS WT IPV K++ E+
Sbjct: 444 RDMEQRLREKLEDTKRQWKEQQGKENSE------VTVEDIANVVSTWTRIPVSKLAQTET 497
Query: 365 DRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAK 424
D+LL +E LH RVIGQDEAV A+++A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+
Sbjct: 498 DKLLNLESILHDRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELAR 557
Query: 425 ALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLF 484
ALA FG E+AMIR+DMSE+ME+H+ S+L+GSPPGYVGY EGGQLTE VRR+PY+VVL
Sbjct: 558 ALAESMFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPYSVVLL 617
Query: 485 DEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDL 544
DE+EKAHPDVFN++LQ+LEDGRLTDSKGRTVDF+NT++IMTSNVG+ +++ + +GF++
Sbjct: 618 DEVEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTIVIMTSNVGAEALKR-NKHLGFNV 676
Query: 545 DYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDR 604
+ +D Y+ +K V +ELK+ FRPEFLNR+DE+IVF L K ++EI +M+ ++ R
Sbjct: 677 QDESRD--YSDMKGKVMDELKKAFRPEFLNRIDEIIVFHMLEKKHIQEIVTLMVNQLVSR 734
Query: 605 LKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVI 664
LK ++IEL +TE + ++G++ YGARPLRRAI + +ED ++E++L I++G VI
Sbjct: 735 LKEQEIELHLTEGAIAAIADKGFDREYGARPLRRAIQKHVEDRLSEELLKGAIEKGQKVI 794
Query: 665 VDVDSD 670
DV+ +
Sbjct: 795 FDVEGE 800
>gi|16799341|ref|NP_469609.1| endopeptidase Clp ATP-binding chain C [Listeria innocua Clip11262]
gi|423099292|ref|ZP_17086999.1| negative regulator of genetic competence ClpC/MecB [Listeria
innocua ATCC 33091]
gi|16412693|emb|CAC95497.1| endopeptidase Clp ATP-binding chain C [Listeria innocua Clip11262]
gi|370794190|gb|EHN61972.1| negative regulator of genetic competence ClpC/MecB [Listeria
innocua ATCC 33091]
Length = 820
Score = 790 bits (2041), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/668 (58%), Positives = 519/668 (77%), Gaps = 14/668 (2%)
Query: 10 GAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLI 69
G G ++ PTL+ +LT +A E LDPV+GR +I+RV+++L RRTKNNP LI
Sbjct: 147 ATGAGRQTNTQATPTLDSLARDLTVIAREENLDPVIGRSKEIQRVIEVLSRRTKNNPVLI 206
Query: 70 GEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEE 129
GEPGVGKTAIAEGLAQ+I +VP+T+ GK+V+TLDMG +VAGTKYRGEFE+RLKK+M+E
Sbjct: 207 GEPGVGKTAIAEGLAQQIVRNEVPETLRGKRVMTLDMGTVVAGTKYRGEFEDRLKKVMDE 266
Query: 130 IKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKD 189
I+Q+ +ILFIDE+HTLIGAG AEGAIDA+NILKP LARGELQCIGATTLDEYRK+IEKD
Sbjct: 267 IRQAGNVILFIDELHTLIGAGGAEGAIDASNILKPPLARGELQCIGATTLDEYRKYIEKD 326
Query: 190 PALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFL 249
ALERRFQP+KV EP+V+E+IQIL GLR+RYE HH++ TDEAL +A +LS +YISDRFL
Sbjct: 327 AALERRFQPIKVDEPTVEESIQILHGLRDRYEAHHRVAITDEALEAAVRLSDRYISDRFL 386
Query: 250 PDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREM 309
PDKAID+IDE+GS+VRL+ P+ +E+E L ++ KEK+ AV+GQ+FEKA LRD+E
Sbjct: 387 PDKAIDVIDESGSKVRLKSFTTPKNVKEMENNLSELKKEKDAAVQGQEFEKAAALRDKEQ 446
Query: 310 DLKAQISALVDKGKEMSKA--ETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRL 367
LK K E +KA + + G VTE + +V++WTGIPV K++ E+++L
Sbjct: 447 KLK--------KSLEETKANWQEKQGLDHSEVTEDIVAEVVASWTGIPVAKLAETETNKL 498
Query: 368 LKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALA 427
L ME+ LH+RVIGQD AVKA+S A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+ALA
Sbjct: 499 LNMEKLLHERVIGQDAAVKAVSLAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALA 558
Query: 428 AYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEI 487
FG E++MIR+DMSE+ME+ + ++L+G+PPGYVGY EGGQLTE VR++PY+VVL DEI
Sbjct: 559 ESMFGDEDSMIRIDMSEYMEKFSTARLVGAPPGYVGYEEGGQLTEKVRQKPYSVVLLDEI 618
Query: 488 EKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYD 547
EKAHPDVFNM+LQ+L+DGRLTDSKGR VDF+NT++IMTSN+G+ + K + +GF++
Sbjct: 619 EKAHPDVFNMLLQVLDDGRLTDSKGRVVDFRNTVIIMTSNIGAQEM-KQDKSMGFNVIDP 677
Query: 548 EKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKT 607
KD + ++ V ++LKQ FRPEF+NR+DE IVF L + E+K+I ++ ++ RL
Sbjct: 678 LKD--HKAMEHRVLQDLKQAFRPEFINRIDETIVFHSLQEKELKQIVTLLTSQLTKRLAE 735
Query: 608 KDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDV 667
+DI +++TE + ++ ++GY+P YGARPL+RAI + +ED ++E++L IK GD+V + V
Sbjct: 736 RDIHVKLTEGAKAKIAKDGYDPEYGARPLKRAIQKEVEDMLSEELLRGNIKVGDNVEIGV 795
Query: 668 DSDGNVTV 675
DG + V
Sbjct: 796 -KDGKLEV 802
>gi|229009591|ref|ZP_04166817.1| Negative regulator of genetic competence [Bacillus mycoides DSM
2048]
gi|229053928|ref|ZP_04195362.1| Negative regulator of genetic competence [Bacillus cereus AH603]
gi|423370664|ref|ZP_17348069.1| chaperone ClpB [Bacillus cereus VD142]
gi|423456297|ref|ZP_17433150.1| chaperone ClpB [Bacillus cereus BAG5X1-1]
gi|423473107|ref|ZP_17449849.1| chaperone ClpB [Bacillus cereus BAG6O-2]
gi|423526416|ref|ZP_17502865.1| chaperone ClpB [Bacillus cereus HuA4-10]
gi|423556922|ref|ZP_17533225.1| chaperone ClpB [Bacillus cereus MC67]
gi|423602389|ref|ZP_17578389.1| chaperone ClpB [Bacillus cereus VD078]
gi|423665405|ref|ZP_17640544.1| chaperone ClpB [Bacillus cereus VDM022]
gi|228721346|gb|EEL72867.1| Negative regulator of genetic competence [Bacillus cereus AH603]
gi|228751613|gb|EEM01413.1| Negative regulator of genetic competence [Bacillus mycoides DSM
2048]
gi|401073400|gb|EJP81822.1| chaperone ClpB [Bacillus cereus VD142]
gi|401130896|gb|EJQ38551.1| chaperone ClpB [Bacillus cereus BAG5X1-1]
gi|401163466|gb|EJQ70812.1| chaperone ClpB [Bacillus cereus HuA4-10]
gi|401194237|gb|EJR01229.1| chaperone ClpB [Bacillus cereus MC67]
gi|401225928|gb|EJR32472.1| chaperone ClpB [Bacillus cereus VD078]
gi|401290312|gb|EJR96007.1| chaperone ClpB [Bacillus cereus VDM022]
gi|402426605|gb|EJV58726.1| chaperone ClpB [Bacillus cereus BAG6O-2]
Length = 811
Score = 790 bits (2041), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/669 (59%), Positives = 522/669 (78%), Gaps = 9/669 (1%)
Query: 5 STEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKN 64
S EA GG S+ PTL+ +LT +A E +LDPV+GR +I+RV+++L RRTKN
Sbjct: 144 SNEASSGHQGGSSTNANTPTLDSLARDLTVVARENRLDPVIGRSKEIQRVIEVLSRRTKN 203
Query: 65 NPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLK 124
NP LIGEPGVGKTAIAEGLAQ+I + +VP+T+ K+V+TLDMG +VAGTKYRGEFE+RLK
Sbjct: 204 NPVLIGEPGVGKTAIAEGLAQQIVNNEVPETLRDKRVMTLDMGTVVAGTKYRGEFEDRLK 263
Query: 125 KLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRK 184
K+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTLDEYRK
Sbjct: 264 KVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEYRK 323
Query: 185 HIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYI 244
+IEKD ALERRFQP+ V EP+++E++QILKGLR+RYE HH++ TD+A+ +A +LS +YI
Sbjct: 324 YIEKDAALERRFQPIHVDEPNLEESVQILKGLRDRYEAHHRVSITDDAIDAAVKLSDRYI 383
Query: 245 SDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGEL 304
+DRFLPDKAIDLIDEA S+VRLR P +ELE +L +I KEK+ AV+ Q+FEKA L
Sbjct: 384 TDRFLPDKAIDLIDEAASKVRLRSYTTPPNLKELEVKLEEIRKEKDAAVQSQEFEKAASL 443
Query: 305 RDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDES 364
RD E L+ ++ + KE + G VT DI ++VS WT IPV K++ E+
Sbjct: 444 RDMEQRLREKLEDTKRQWKE------KQGQENSEVTVEDIANVVSTWTRIPVSKLAQTET 497
Query: 365 DRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAK 424
D+LL +E LH R+IGQDEAV A+++A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+
Sbjct: 498 DKLLNLESILHDRLIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELAR 557
Query: 425 ALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLF 484
ALA FG E+AMIR+DMSE+ME+H+ S+L+GSPPGYVGY EGGQLTE VRR+PY+VVL
Sbjct: 558 ALAESMFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPYSVVLL 617
Query: 485 DEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDL 544
DE+EKAHPDVFN++LQ+LEDGRLTDSKGRTVDF+NT++IMTSNVG+ +++ + +GF++
Sbjct: 618 DEVEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTIVIMTSNVGADALKR-NKHLGFNV 676
Query: 545 DYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDR 604
+ +D Y+ +K V +ELK+ FRPEFLNR+DE+IVF L K ++EI +M+ ++ +R
Sbjct: 677 QDESRD--YSDMKGKVMDELKKAFRPEFLNRIDEIIVFHMLEKKHIQEIVTLMVNQLVNR 734
Query: 605 LKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVI 664
LK ++IEL +TE + ++G++ YGARPLRRAI + +ED ++E++L I++G VI
Sbjct: 735 LKEQEIELHLTEGAISAIADKGFDREYGARPLRRAIQKHVEDRLSEELLKGAIEKGQKVI 794
Query: 665 VDVDSDGNV 673
D++ + V
Sbjct: 795 FDIEGESFV 803
>gi|423399355|ref|ZP_17376553.1| chaperone ClpB [Bacillus cereus BAG2X1-1]
gi|423409869|ref|ZP_17387018.1| chaperone ClpB [Bacillus cereus BAG2X1-3]
gi|401644455|gb|EJS62145.1| chaperone ClpB [Bacillus cereus BAG2X1-1]
gi|401652409|gb|EJS69966.1| chaperone ClpB [Bacillus cereus BAG2X1-3]
Length = 811
Score = 790 bits (2041), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/669 (59%), Positives = 520/669 (77%), Gaps = 9/669 (1%)
Query: 5 STEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKN 64
S EA GG ++ PTL+ +LT +A E +LDPV+GR +I+RV+++L RRTKN
Sbjct: 144 SNEASSGHQGGSATNANTPTLDSLARDLTVVARENRLDPVIGRGKEIQRVIEVLSRRTKN 203
Query: 65 NPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLK 124
NP LIGEPGVGKTAIAEGLAQ+I + +VP+T+ K+V+TLDMG +VAGTKYRGEFE+RLK
Sbjct: 204 NPVLIGEPGVGKTAIAEGLAQQIVNNEVPETLRDKRVMTLDMGTVVAGTKYRGEFEDRLK 263
Query: 125 KLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRK 184
K+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTLDEYRK
Sbjct: 264 KVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEYRK 323
Query: 185 HIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYI 244
+IEKD ALERRFQP+ V EPS++E+IQILKGLR+RYE HH++ TD+A+ +A +LS +YI
Sbjct: 324 YIEKDAALERRFQPIHVDEPSLEESIQILKGLRDRYEAHHRVSITDDAIDAAVKLSDRYI 383
Query: 245 SDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGEL 304
+DRFLPDKAIDLIDEA S+VRLR P +ELE L +I KEK+ AV+ Q+FEKA L
Sbjct: 384 TDRFLPDKAIDLIDEAASKVRLRSYTTPPNLKELEVNLEEIRKEKDAAVQSQEFEKAASL 443
Query: 305 RDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDES 364
RD E L+ ++ + KE E VT DI ++VS WT IPV K++ E+
Sbjct: 444 RDMEQRLREKLEDTKRQWKEQQGKENSE------VTVEDIANVVSTWTRIPVSKLAQTET 497
Query: 365 DRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAK 424
D+LL +E LH R+IGQDEAV A+++A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+
Sbjct: 498 DKLLNLESILHDRLIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELAR 557
Query: 425 ALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLF 484
ALA FG E+AMIR+DMSE+ME+H+ S+L+GSPPGYVGY EGGQLTE VRR+PY+VVL
Sbjct: 558 ALAESMFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPYSVVLL 617
Query: 485 DEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDL 544
DE+EKAHPDVFN++LQ+LEDGRLTDSKGRTVDF+NT++IMTSNVG+ +++ + +GF++
Sbjct: 618 DEVEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTIVIMTSNVGADALKR-NKHLGFNV 676
Query: 545 DYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDR 604
+ +D Y+ +K V +ELK+ FRPEFLNR+DE+IVF L K ++EI +M+ ++ +R
Sbjct: 677 QDESRD--YSDMKGKVMDELKKAFRPEFLNRIDEIIVFHMLEKKHIQEIVTLMVNQLVNR 734
Query: 605 LKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVI 664
LK ++IEL +TE + ++G++ YGARPLRRAI + +ED ++E++L I++G VI
Sbjct: 735 LKEQEIELHLTEGAIAAIADKGFDREYGARPLRRAIQKHVEDRLSEELLKGAIEKGQKVI 794
Query: 665 VDVDSDGNV 673
DV+ + V
Sbjct: 795 FDVEGESFV 803
>gi|16802278|ref|NP_463763.1| endopeptidase Clp ATP-binding chain C [Listeria monocytogenes
EGD-e]
gi|47097423|ref|ZP_00234971.1| negative regulator of genetic competence ClpC/MecB [Listeria
monocytogenes str. 1/2a F6854]
gi|254828692|ref|ZP_05233379.1| endopeptidase subunit Clp ATP-binding C [Listeria monocytogenes FSL
N3-165]
gi|254913462|ref|ZP_05263474.1| endopeptidase Clp ATP-binding chain C [Listeria monocytogenes
J2818]
gi|254937957|ref|ZP_05269654.1| endopeptidase subunit Clp ATP-binding C [Listeria monocytogenes
F6900]
gi|284800527|ref|YP_003412392.1| endopeptidase Clp ATP-binding chain C [Listeria monocytogenes
08-5578]
gi|284993713|ref|YP_003415481.1| endopeptidase Clp ATP-binding chain C [Listeria monocytogenes
08-5923]
gi|386042568|ref|YP_005961373.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Listeria
monocytogenes 10403S]
gi|386045869|ref|YP_005964201.1| Clp protease ATP binding subunit [Listeria monocytogenes J0161]
gi|386049161|ref|YP_005967152.1| endopeptidase subunit Clp ATP-binding C [Listeria monocytogenes FSL
R2-561]
gi|386052509|ref|YP_005970067.1| endopeptidase subunit Clp ATP-binding C [Listeria monocytogenes
Finland 1998]
gi|404282664|ref|YP_006683561.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes SLCC2372]
gi|404409465|ref|YP_006695053.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes SLCC5850]
gi|404412333|ref|YP_006697920.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes SLCC7179]
gi|405757220|ref|YP_006686496.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes SLCC2479]
gi|16409597|emb|CAD00759.1| endopeptidase Clp ATP-binding chain C [Listeria monocytogenes
EGD-e]
gi|47014200|gb|EAL05185.1| negative regulator of genetic competence ClpC/MecB [Listeria
monocytogenes str. 1/2a F6854]
gi|258601096|gb|EEW14421.1| endopeptidase subunit Clp ATP-binding C [Listeria monocytogenes FSL
N3-165]
gi|258610567|gb|EEW23175.1| endopeptidase subunit Clp ATP-binding C [Listeria monocytogenes
F6900]
gi|284056089|gb|ADB67030.1| endopeptidase Clp ATP-binding chain C [Listeria monocytogenes
08-5578]
gi|284059180|gb|ADB70119.1| endopeptidase Clp ATP-binding chain C [Listeria monocytogenes
08-5923]
gi|293591469|gb|EFF99803.1| endopeptidase Clp ATP-binding chain C [Listeria monocytogenes
J2818]
gi|345532860|gb|AEO02301.1| Clp protease ATP binding subunit [Listeria monocytogenes J0161]
gi|345535802|gb|AEO05242.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Listeria
monocytogenes 10403S]
gi|346423007|gb|AEO24532.1| endopeptidase subunit Clp ATP-binding C [Listeria monocytogenes FSL
R2-561]
gi|346645160|gb|AEO37785.1| endopeptidase subunit Clp ATP-binding C [Listeria monocytogenes
Finland 1998]
gi|404229291|emb|CBY50695.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes SLCC5850]
gi|404232166|emb|CBY53569.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes SLCC2372]
gi|404235102|emb|CBY56504.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes SLCC2479]
gi|404238032|emb|CBY59433.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes SLCC7179]
gi|441469781|emb|CCQ19536.1| Negative regulator of genetic competence ClpC/MecB [Listeria
monocytogenes]
gi|441472917|emb|CCQ22671.1| Negative regulator of genetic competence ClpC/MecB [Listeria
monocytogenes N53-1]
Length = 820
Score = 790 bits (2040), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/668 (58%), Positives = 517/668 (77%), Gaps = 14/668 (2%)
Query: 10 GAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLI 69
G G ++ PTL+ +LT +A E LDPV+GR +I+RV+++L RRTKNNP LI
Sbjct: 147 ATGAGRQTNTQATPTLDSLARDLTVIAREDNLDPVIGRSKEIQRVIEVLSRRTKNNPVLI 206
Query: 70 GEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEE 129
GEPGVGKTAIAEGLAQ+I +VP+T+ GK+V+TLDMG +VAGTKYRGEFE+RLKK+M+E
Sbjct: 207 GEPGVGKTAIAEGLAQQIVRNEVPETLRGKRVMTLDMGTVVAGTKYRGEFEDRLKKVMDE 266
Query: 130 IKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKD 189
I+Q+ +ILFIDE+HTLIGAG AEGAIDA+NILKP LARGELQCIGATTLDEYRK+IEKD
Sbjct: 267 IRQAGNVILFIDELHTLIGAGGAEGAIDASNILKPPLARGELQCIGATTLDEYRKYIEKD 326
Query: 190 PALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFL 249
ALERRFQP+KV EP+V+E+IQIL GLR+RYE HH++ TDEAL +A +LS +YISDRFL
Sbjct: 327 AALERRFQPIKVDEPTVEESIQILHGLRDRYEAHHRVAITDEALEAAVRLSDRYISDRFL 386
Query: 250 PDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREM 309
PDKAID+IDE+GS+VRL+ P+ +E+E L + KEK+ AV+GQ+FEKA LRD+E
Sbjct: 387 PDKAIDVIDESGSKVRLKSFTTPKNVKEMENNLSDLKKEKDAAVQGQEFEKAASLRDKEQ 446
Query: 310 DLKAQISALVDKGKEMSKA--ETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRL 367
LK K E +KA + + G VTE + +V++WTGIPV K++ E+++L
Sbjct: 447 KLK--------KSLEETKANWQEKQGLDHSEVTEDIVAEVVASWTGIPVAKLAETETNKL 498
Query: 368 LKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALA 427
L ME+ LH+RVIGQD AVKA+S A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+ALA
Sbjct: 499 LNMEKLLHERVIGQDAAVKAVSLAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALA 558
Query: 428 AYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEI 487
FG E++MIR+DMSE+ME+ + ++L+G+PPGYVGY EGGQLTE VR++PY+VVL DEI
Sbjct: 559 ESMFGDEDSMIRIDMSEYMEKFSTARLVGAPPGYVGYEEGGQLTEKVRQKPYSVVLLDEI 618
Query: 488 EKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYD 547
EKAHPDVFNM+LQ+L+DGRLTDSKGR VDF+NT++IMTSN+G+ + K + +GF++
Sbjct: 619 EKAHPDVFNMLLQVLDDGRLTDSKGRVVDFRNTVIIMTSNIGAQEM-KQDKSMGFNVTDP 677
Query: 548 EKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKT 607
KD + ++ V ++LKQ FRPEF+NR+DE IVF L + E+K+I ++ ++ RL
Sbjct: 678 LKD--HKAMEHRVLQDLKQAFRPEFINRIDETIVFHSLQEKELKQIVTLLTAQLTKRLAE 735
Query: 608 KDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDV 667
+DI +++TE + ++ ++GY+P YGARPL+RAI + +ED ++E++L IK GD V + V
Sbjct: 736 RDIHVKLTEGAKSKIAKDGYDPEYGARPLKRAIQKEVEDMLSEELLRGNIKVGDYVEIGV 795
Query: 668 DSDGNVTV 675
DG + V
Sbjct: 796 -KDGKLEV 802
>gi|229015484|ref|ZP_04172482.1| Negative regulator of genetic competence [Bacillus cereus AH1273]
gi|229021693|ref|ZP_04178275.1| Negative regulator of genetic competence [Bacillus cereus AH1272]
gi|423393465|ref|ZP_17370691.1| chaperone ClpB [Bacillus cereus BAG1X1-3]
gi|228739561|gb|EEL89975.1| Negative regulator of genetic competence [Bacillus cereus AH1272]
gi|228745771|gb|EEL95775.1| Negative regulator of genetic competence [Bacillus cereus AH1273]
gi|401629572|gb|EJS47385.1| chaperone ClpB [Bacillus cereus BAG1X1-3]
Length = 811
Score = 790 bits (2040), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 398/669 (59%), Positives = 520/669 (77%), Gaps = 9/669 (1%)
Query: 5 STEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKN 64
S EA GG S+ PTL+ +LT +A E +LDPV+GR +I+RV+++L RRTKN
Sbjct: 144 SNEASSGHQGGSSTNANTPTLDSLARDLTVVARENRLDPVIGRSKEIQRVIEVLSRRTKN 203
Query: 65 NPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLK 124
NP LIGEPGVGKTAIAEGLAQ+I + +VP+T+ K+V+TLDMG +VAGTKYRGEFE+RLK
Sbjct: 204 NPVLIGEPGVGKTAIAEGLAQQIVNNEVPETLRDKRVMTLDMGTVVAGTKYRGEFEDRLK 263
Query: 125 KLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRK 184
K+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTLDEYRK
Sbjct: 264 KVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEYRK 323
Query: 185 HIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYI 244
+IEKD ALERRFQP+ V EPS++E+IQILKGLR+RYE HH++ TD+A+ +A +LS +YI
Sbjct: 324 YIEKDAALERRFQPIHVDEPSLEESIQILKGLRDRYEAHHRVSITDDAIDAAVKLSDRYI 383
Query: 245 SDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGEL 304
+DRFLPDKAIDLIDEA S+VRLR P +ELE +L +I KEK+ AV+ Q+FEKA L
Sbjct: 384 TDRFLPDKAIDLIDEAASKVRLRSYTTPPNLKELEVKLEEIRKEKDAAVQSQEFEKAASL 443
Query: 305 RDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDES 364
RD E L+ ++ + KE E VT DI ++VS WT IPV K++ E+
Sbjct: 444 RDMEQRLREKLEDTKRQWKEQQGKENSE------VTVEDIANVVSTWTRIPVSKLAQTET 497
Query: 365 DRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAK 424
D+LL +E LH R+IGQDEAV A+++A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+
Sbjct: 498 DKLLNLESILHDRLIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELAR 557
Query: 425 ALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLF 484
ALA FG E+AMIR+DMSE+ME+H+ S+L+GSPPGYVGY EGGQLTE VRR+PY+VVL
Sbjct: 558 ALAESMFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPYSVVLL 617
Query: 485 DEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDL 544
DE+EKAHPDVFN++LQ+LEDGRLTDSKGRTVDF+NT++IMTSNVG+ +++ + +GF++
Sbjct: 618 DEVEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTIVIMTSNVGADALKR-NKHLGFNV 676
Query: 545 DYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDR 604
+ +D Y+ +K V +ELK+ FRPEFLNR+DE+IVF L K ++EI +M+ ++ R
Sbjct: 677 QDEGRD--YSDMKGKVMDELKKAFRPEFLNRIDEIIVFHMLEKKHIQEIVTLMVNQLVKR 734
Query: 605 LKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVI 664
LK ++IEL +TE + ++G++ YGARPLRRAI + +ED ++E++L I++G VI
Sbjct: 735 LKEQEIELHLTEGAIAAIADKGFDREYGARPLRRAIQKHVEDRLSEELLKGAIEKGQKVI 794
Query: 665 VDVDSDGNV 673
DV+ + V
Sbjct: 795 FDVEGESFV 803
>gi|217965681|ref|YP_002351359.1| negative regulator of genetic competence ClpC/mecB [Listeria
monocytogenes HCC23]
gi|290892627|ref|ZP_06555620.1| endopeptidase subunit Clp ATP-binding C [Listeria monocytogenes FSL
J2-071]
gi|386006961|ref|YP_005925239.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes L99]
gi|386025542|ref|YP_005946318.1| Clp endopeptidase ATP-binding subunit [Listeria monocytogenes M7]
gi|404406685|ref|YP_006689400.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes SLCC2376]
gi|217334951|gb|ACK40745.1| negative regulator of genetic competence ClpC/mecB [Listeria
monocytogenes HCC23]
gi|290557936|gb|EFD91457.1| endopeptidase subunit Clp ATP-binding C [Listeria monocytogenes FSL
J2-071]
gi|307569771|emb|CAR82950.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes L99]
gi|336022123|gb|AEH91260.1| Clp endopeptidase ATP-binding subunit; putative ClpB [Listeria
monocytogenes M7]
gi|404240834|emb|CBY62234.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes SLCC2376]
Length = 820
Score = 790 bits (2040), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/668 (58%), Positives = 518/668 (77%), Gaps = 14/668 (2%)
Query: 10 GAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLI 69
G G ++ PTL+ +LT +A E LDPV+GR +I+RV+++L RRTKNNP LI
Sbjct: 147 ATGAGRQTNTQATPTLDSLARDLTVIAREDNLDPVIGRSKEIQRVIEVLSRRTKNNPVLI 206
Query: 70 GEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEE 129
GEPGVGKTAIAEGLAQ+I +VP+T+ GK+V+TLDMG +VAGTKYRGEFE+RLKK+M+E
Sbjct: 207 GEPGVGKTAIAEGLAQQIVRNEVPETLRGKRVMTLDMGTVVAGTKYRGEFEDRLKKVMDE 266
Query: 130 IKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKD 189
I+Q+ +ILFIDE+HTLIGAG AEGAIDA+NILKP LARGELQCIGATTLDEYRK+IEKD
Sbjct: 267 IRQAGNVILFIDELHTLIGAGGAEGAIDASNILKPPLARGELQCIGATTLDEYRKYIEKD 326
Query: 190 PALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFL 249
ALERRFQP+KV EP+V+E+IQIL GLR+RYE HH++ TDEAL +A +LS +YISDRFL
Sbjct: 327 AALERRFQPIKVDEPTVEESIQILHGLRDRYEAHHRVAITDEALEAAVRLSDRYISDRFL 386
Query: 250 PDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREM 309
PDKAID+IDE+GS+VRL+ P+ +E+E L ++ KEK+ AV+GQ+FEKA LRD+E
Sbjct: 387 PDKAIDVIDESGSKVRLKSFTTPKNVKEMENNLSELKKEKDAAVQGQEFEKAASLRDKEQ 446
Query: 310 DLKAQISALVDKGKEMSKA--ETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRL 367
LK K E +KA + + G VTE + +V++WTGIPV K++ E+++L
Sbjct: 447 KLK--------KSLEETKANWQEKQGLDHSEVTEDIVAEVVASWTGIPVAKLAETETNKL 498
Query: 368 LKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALA 427
L ME+ LH+RVIGQD AVKA+S A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+ALA
Sbjct: 499 LNMEKLLHERVIGQDAAVKAVSLAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALA 558
Query: 428 AYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEI 487
FG E++MIR+DMSE+ME+ + ++L+G+PPGYVGY EGGQLTE VR++PY+VVL DEI
Sbjct: 559 ESMFGDEDSMIRIDMSEYMEKFSTARLVGAPPGYVGYEEGGQLTEKVRQKPYSVVLLDEI 618
Query: 488 EKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYD 547
EKAHPDVFNM+LQ+L+DGRLTDSKGR VDF+NT++IMTSN+G+ + K + +GF++
Sbjct: 619 EKAHPDVFNMLLQVLDDGRLTDSKGRVVDFRNTVIIMTSNIGAQEM-KQDKSMGFNVIDP 677
Query: 548 EKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKT 607
KD + ++ V ++LKQ FRPEF+NR+DE IVF L + E+K+I ++ ++ RL
Sbjct: 678 LKD--HKAMEHRVLQDLKQAFRPEFINRIDETIVFHSLQEKELKQIVTLLTAQLTKRLAE 735
Query: 608 KDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDV 667
+DI +++TE + ++ ++GY+P YGARPL+RAI + +ED ++E++L IK GD V + V
Sbjct: 736 RDIHVKLTEGAKAKIAKDGYDPEYGARPLKRAIQKEVEDMLSEELLRGNIKVGDYVEIGV 795
Query: 668 DSDGNVTV 675
DG + V
Sbjct: 796 -KDGKLEV 802
>gi|116668736|ref|YP_829669.1| ATPase [Arthrobacter sp. FB24]
gi|116608845|gb|ABK01569.1| ATPase AAA-2 domain protein [Arthrobacter sp. FB24]
Length = 830
Score = 790 bits (2040), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/672 (59%), Positives = 515/672 (76%), Gaps = 11/672 (1%)
Query: 4 ESTEAVGAGVGGGS---SGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
+ E GAGVG G + L+++G NLT+ A E KLDPV+GR+ ++ERV+Q+L R
Sbjct: 146 QGKETTGAGVGAGQPEGTPAGSVVLDQFGRNLTQAARENKLDPVIGREQEMERVMQVLSR 205
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNP LIGEPGVGKTA+ EGLAQ I GDVP+TI+ K++ TLD+G LVAG++YRG+FE
Sbjct: 206 RTKNNPVLIGEPGVGKTAVVEGLAQAIVRGDVPETIKDKQLYTLDLGSLVAGSRYRGDFE 265
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
ERLKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLD
Sbjct: 266 ERLKKVLKEIRTRGDIILFIDEIHTLVGAGAAEGAIDAASILKPMLARGELQTIGATTLD 325
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRKHIEKD ALERRFQP++V EPSV I+ILKGLR+RYE HH++ TD AL SAA LS
Sbjct: 326 EYRKHIEKDAALERRFQPIQVKEPSVAHAIEILKGLRDRYEAHHRVTITDGALASAANLS 385
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
+YISDRFLPDKAIDLIDEAG+R+R+R P E + +++ + ++ EK A+ QDFE
Sbjct: 386 ERYISDRFLPDKAIDLIDEAGARLRIRRMTAPPELKAMDERIAELKMEKESAIDAQDFEG 445
Query: 301 AGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVS 360
A LRD+E L + ++ ++ +T D V E I +++ TGIPV K++
Sbjct: 446 AASLRDKEQKL------IAERAEKERHWKTGGMDDISEVDEDLIAEVLANSTGIPVFKLT 499
Query: 361 TDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 420
+ES RLLKME+ LHKRV+GQ+EA+KA+S+AIRR R GLK+P RP SFIF+GPTGVGK+
Sbjct: 500 EEESSRLLKMEDELHKRVVGQNEAIKALSQAIRRTRAGLKDPKRPGGSFIFAGPTGVGKT 559
Query: 421 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 480
ELAKALA + FG E+A+I LDMSE+ E+HTVS+L G+PPGYVGY EGGQLTE VRRRP++
Sbjct: 560 ELAKALAEFLFGEEDALITLDMSEYSEKHTVSRLFGAPPGYVGYEEGGQLTEKVRRRPFS 619
Query: 481 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI 540
VVLFDE+EKAH D+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N+G+ I K
Sbjct: 620 VVLFDEVEKAHADLFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNLGTRDISK-SVAT 678
Query: 541 GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 600
GF D + + YNR+++ VTEELKQ+FRPEFLNR+D+++VF QLT+ E+ EI D+ +
Sbjct: 679 GFQSGTDTQ-TGYNRMRARVTEELKQHFRPEFLNRVDDVVVFPQLTQDEIIEIVDLFVSR 737
Query: 601 VFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEG 660
+ RLK KD+ +++T+ + + GY+P+ GARPLRR I R +ED ++EK+L EI G
Sbjct: 738 LEKRLKDKDMGIELTKAAKVLLATRGYDPAMGARPLRRTIQREIEDQLSEKILFGEIHAG 797
Query: 661 DSVIVDVDSDGN 672
D V+VDVD +G+
Sbjct: 798 DIVVVDVDGEGD 809
>gi|289522311|ref|ZP_06439165.1| negative regulator of genetic competence ClpC/MecB [Anaerobaculum
hydrogeniformans ATCC BAA-1850]
gi|289504147|gb|EFD25311.1| negative regulator of genetic competence ClpC/MecB [Anaerobaculum
hydrogeniformans ATCC BAA-1850]
Length = 832
Score = 790 bits (2039), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/665 (58%), Positives = 520/665 (78%), Gaps = 9/665 (1%)
Query: 12 GVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGE 71
G+ S K PTL++ G +L ++A +G+LDPV+GR+ +I+RV+QIL RRTKNNPCLIG+
Sbjct: 156 GLSRKKSHTKTPTLDQLGIDLVEMARQGELDPVIGREREIQRVIQILSRRTKNNPCLIGD 215
Query: 72 PGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIK 131
PGVGKTAI EGLAQRIA+G+VP+ ++ K+++ L++G LVAGTKYRGEFEER++KL++E++
Sbjct: 216 PGVGKTAIVEGLAQRIATGEVPEVLKNKRIVQLNIGNLVAGTKYRGEFEERMRKLVKEVR 275
Query: 132 QSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPA 191
S ++I+FIDE+HTL+GAG AEGA+DAANILKPSLA+GE Q IGATTLDEYRK+IEKD A
Sbjct: 276 DSKDVIVFIDEIHTLVGAGGAEGAVDAANILKPSLAKGEFQVIGATTLDEYRKYIEKDSA 335
Query: 192 LERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPD 251
LERRFQPV V EP++++TI+ILKGLR++YE HH+++ TD+AL +AA+LS +YISDR+LPD
Sbjct: 336 LERRFQPVFVGEPNIEDTIEILKGLRDKYEAHHRVKITDKALEAAARLSARYISDRYLPD 395
Query: 252 KAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDL 311
KAIDLIDEAG+RVRL PE +ELEK+L + KEK AV Q+FEKA LRD E L
Sbjct: 396 KAIDLIDEAGARVRLSTMNPPEFIKELEKKLETVRKEKEAAVASQEFEKAAALRDEERKL 455
Query: 312 KAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKME 371
++ +K KE +++ P+V E DI +VS WTGIPV +++ +ES RLL+ME
Sbjct: 456 SEELE---EKRKEWQAKKSQE---EPIVDEEDIALVVSEWTGIPVTQMTEEESQRLLRME 509
Query: 372 ETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYF 431
E +HKR+I Q+EAV +++AIRRAR GLK+P RPI SF+F GPTGVGK+EL+KALA + F
Sbjct: 510 EEIHKRIIDQEEAVSIVAKAIRRARSGLKDPQRPIGSFLFLGPTGVGKTELSKALAEFMF 569
Query: 432 GSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAH 491
G E +MIRLDMSEFMERH VSKLIG+PPGYVGY EGG+LTEAVRRRPY VVLFDEIEKAH
Sbjct: 570 GDENSMIRLDMSEFMERHEVSKLIGAPPGYVGYEEGGKLTEAVRRRPYAVVLFDEIEKAH 629
Query: 492 PDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDS 551
PDVFN++LQILEDGRLTD +GR VDFKNT++IMTSN+G+ + KG IGF + E
Sbjct: 630 PDVFNILLQILEDGRLTDGQGRVVDFKNTVIIMTSNLGAQDLMKGP-AIGFAAE-SEYQI 687
Query: 552 SYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIE 611
+ K + + +++ FRPEF+NR+DE++VF+ L + E+ +I DIM+ +V +RL K I
Sbjct: 688 DFEAAKKNILDAVRRTFRPEFINRIDEIVVFKPLGEKELLQIVDIMIDDVAERLAEKGIF 747
Query: 612 LQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDG 671
++V++ + ++++GY P +GARPLRR I R +ED +A+ +L +IK + VDV D
Sbjct: 748 IEVSDAAKGFLLKKGYEPKFGARPLRRTIQRYIEDRLADILLEGKIKPESVIKVDVSED- 806
Query: 672 NVTVL 676
N+T +
Sbjct: 807 NITFI 811
>gi|423614628|ref|ZP_17590485.1| chaperone ClpB [Bacillus cereus VD107]
gi|401237472|gb|EJR43924.1| chaperone ClpB [Bacillus cereus VD107]
Length = 811
Score = 790 bits (2039), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/669 (59%), Positives = 521/669 (77%), Gaps = 9/669 (1%)
Query: 5 STEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKN 64
S EA GG S+ PTL+ +LT +A E +LDPV+GR +I+RV+++L RRTKN
Sbjct: 144 SNEASSGHQGGSSTNANTPTLDSLARDLTVVARESRLDPVIGRSKEIQRVIEVLSRRTKN 203
Query: 65 NPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLK 124
NP LIGEPGVGKTAIAEGLAQ+I + +VP+T+ K+V+TLDMG +VAGTKYRGEFE+RLK
Sbjct: 204 NPVLIGEPGVGKTAIAEGLAQQIVNNEVPETLRDKRVMTLDMGTVVAGTKYRGEFEDRLK 263
Query: 125 KLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRK 184
K+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTLDEYRK
Sbjct: 264 KVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEYRK 323
Query: 185 HIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYI 244
+IEKD ALERRFQP+ V EP+++E++QILKGLR+RYE HH++ TD+A+ +A +LS +YI
Sbjct: 324 YIEKDAALERRFQPIHVDEPNLEESVQILKGLRDRYEAHHRVSITDDAIDAAVKLSDRYI 383
Query: 245 SDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGEL 304
+DRFLPDKAIDLIDEA S+VRLR P +ELE +L +I KEK+ AV+ Q+FEKA L
Sbjct: 384 TDRFLPDKAIDLIDEAASKVRLRSYTTPPNLKELEVKLEEIRKEKDAAVQSQEFEKAASL 443
Query: 305 RDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDES 364
RD E L+ ++ + KE E VT DI ++VS WT IPV K++ E+
Sbjct: 444 RDMEQRLREKLEDTKRQWKEQQGKENSE------VTVEDIANVVSTWTRIPVSKLAQTET 497
Query: 365 DRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAK 424
D+LL +E LH R+IGQ+EAV A+++A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+
Sbjct: 498 DKLLNLESILHDRLIGQEEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELAR 557
Query: 425 ALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLF 484
ALA FG E+AMIR+DMSE+ME+H+ S+L+GSPPGYVGY EGGQLTE VRR+PY+VVL
Sbjct: 558 ALAESMFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPYSVVLL 617
Query: 485 DEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDL 544
DE+EKAHPDVFN++LQ+LEDGRLTDSKGRTVDF+NT++IMTSNVG+ +++ + +GF++
Sbjct: 618 DEVEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTIVIMTSNVGAEALKR-NKHLGFNV 676
Query: 545 DYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDR 604
+ +D Y+ +K V +ELK+ FRPEFLNR+DE+IVF L K ++EI +M+ ++ +R
Sbjct: 677 QDESRD--YSDMKGKVMDELKKAFRPEFLNRIDEIIVFHMLEKKHIQEIVTLMVNQLVNR 734
Query: 605 LKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVI 664
LK ++IEL +TE + ++G++ YGARPLRRAI + +ED ++E++L I++G VI
Sbjct: 735 LKEQEIELHLTEGAISAIADKGFDREYGARPLRRAIQKHVEDRLSEELLKGAIEKGQKVI 794
Query: 665 VDVDSDGNV 673
DV+ + V
Sbjct: 795 FDVEGESFV 803
>gi|357420234|ref|YP_004933226.1| ATPase AAA [Thermovirga lienii DSM 17291]
gi|355397700|gb|AER67129.1| ATPase AAA-2 domain protein [Thermovirga lienii DSM 17291]
Length = 820
Score = 790 bits (2039), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/662 (59%), Positives = 527/662 (79%), Gaps = 9/662 (1%)
Query: 16 GSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVG 75
G+ ++ PTL++ G +LT++A+ G+LDPVVGR +I+R++QIL RR KNNP LIG+PGVG
Sbjct: 164 GAGRSRTPTLDQLGIDLTEMAQRGELDPVVGRTKEIQRLIQILSRRKKNNPVLIGDPGVG 223
Query: 76 KTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDE 135
KTAI EGLAQ++ SGDVP+ ++GK+V+ L++G LVAGTKYRGEFEER++KL++E+++S +
Sbjct: 224 KTAIVEGLAQKVISGDVPEVLKGKRVVQLNVGNLVAGTKYRGEFEERMRKLVKELRESKD 283
Query: 136 IILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERR 195
++LFIDE+HT++GAG AEGA+DAANILKPSLARGE Q IGATTLDEYRKHIEKDPALERR
Sbjct: 284 VVLFIDEIHTIVGAGGAEGAVDAANILKPSLARGEFQVIGATTLDEYRKHIEKDPALERR 343
Query: 196 FQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAID 255
FQPV+V EPSV+++I+IL+GLR+RYE HH+ + TDEALV+AA+LS +YI++RFLPDKAID
Sbjct: 344 FQPVQVDEPSVEDSIKILEGLRDRYEAHHRAKITDEALVAAAKLSERYITERFLPDKAID 403
Query: 256 LIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQI 315
LIDEA +R RL +LPE+ ++LE+EL + KEK AV Q+FEKA +RDRE L QI
Sbjct: 404 LIDEAAARARLNTMELPEDIKQLERELEALRKEKEAAVASQEFEKAAHIRDRERQLSKQI 463
Query: 316 SALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLH 375
+ + + K E PVV E I IVS WTGIPV++++ +ES RLL+MEE +H
Sbjct: 464 E--IKRQEWQVKRNNEE----PVVDEEQIAQIVSEWTGIPVQQLTEEESARLLRMEEEIH 517
Query: 376 KRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEE 435
KR++ Q +AV A++RAIRRAR GLK+P RPI SF+F GPTGVGK+ELA++LA + FGSE+
Sbjct: 518 KRMVNQCDAVNAVARAIRRARSGLKDPKRPIGSFLFLGPTGVGKTELARSLAEFLFGSED 577
Query: 436 AMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVF 495
AM+R DMSE+MERH V+KLIG+PPGYVGY EGG+LTEA+RRRPY+VVLFDEIEKAHPDVF
Sbjct: 578 AMVRFDMSEYMERHEVAKLIGAPPGYVGYEEGGKLTEALRRRPYSVVLFDEIEKAHPDVF 637
Query: 496 NMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNR 555
N++LQILEDGRLTD +G TVDF+N++++MTSNVG+ + K R +GF +E N+
Sbjct: 638 NILLQILEDGRLTDGQGHTVDFRNSVIVMTSNVGAQDLMK-TRSLGFSTSAEE-SFDLNK 695
Query: 556 IKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVT 615
+K + E L++ FRPEFLNR+D++I+F+ L + E+ +I DIMLKEV RLK + +E+ V
Sbjct: 696 MKGSIMEALRKTFRPEFLNRVDDIIIFKPLGREELLQILDIMLKEVETRLKEQGVEIVVP 755
Query: 616 ERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTV 675
+ + ++E+GY+P YGARPLRR + R++ED MA+ +L +I +G + + V SDG +
Sbjct: 756 DETKAFLLEQGYDPKYGARPLRRTLQRMVEDKMADMLLEGKISKGSKIEI-VVSDGELEF 814
Query: 676 LN 677
N
Sbjct: 815 KN 816
>gi|386384235|ref|ZP_10069633.1| ATPase AAA-2 domain-containing protein [Streptomyces tsukubaensis
NRRL18488]
gi|385668306|gb|EIF91651.1| ATPase AAA-2 domain-containing protein [Streptomyces tsukubaensis
NRRL18488]
Length = 841
Score = 790 bits (2039), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 394/667 (59%), Positives = 519/667 (77%), Gaps = 16/667 (2%)
Query: 10 GAGVGGGSSGNKMPTL--EEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPC 67
A GG + G +L +++G NLT+ A E KLDPV+GR+ +IERV+Q+L RRTKNNP
Sbjct: 150 AATAGGPAEGTPSTSLVLDQFGRNLTQAARESKLDPVIGREKEIERVMQVLSRRTKNNPV 209
Query: 68 LIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLM 127
LIGEPGVGKTA+ EGLAQ I G+VP+T++ K + TLD+G LVAG++YRG+FEERLKK++
Sbjct: 210 LIGEPGVGKTAVVEGLAQAIVKGEVPETLKDKHLYTLDLGALVAGSRYRGDFEERLKKVL 269
Query: 128 EEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIE 187
+EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEYRKH+E
Sbjct: 270 KEIRTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIGATTLDEYRKHLE 329
Query: 188 KDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDR 247
KD ALERRFQP++V EPS+ TI+ILKGLR+RYE HH++ TDEALV AA L+ +YISDR
Sbjct: 330 KDAALERRFQPIQVAEPSLPHTIEILKGLRDRYEAHHRVSITDEALVQAATLADRYISDR 389
Query: 248 FLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDR 307
FLPDKAIDLIDEAGSR+R+R P + RE ++++ + ++K A+ QDFEKA LRD+
Sbjct: 390 FLPDKAIDLIDEAGSRMRIRRMTAPPDLREFDEKIAGVRRDKESAIDSQDFEKAASLRDK 449
Query: 308 EMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKVSTDES 364
E L A K + E +AGD+ VV EVD I +++ TGIPV K++ +ES
Sbjct: 450 EKQLLA--------AKAKREKEWKAGDM-DVVAEVDGELIAEVLATATGIPVFKLTEEES 500
Query: 365 DRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAK 424
RLL+ME+ LHKRVIGQ +A+KA+S+AIRR R GLK+P RP SFIF+GP+GVGK+EL+K
Sbjct: 501 SRLLRMEDELHKRVIGQKDAIKALSQAIRRTRAGLKDPKRPGGSFIFAGPSGVGKTELSK 560
Query: 425 ALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLF 484
LA + FG E+A+I LDMSEF E+HTVS+L GSPPGYVGY EGGQLTE VRR+P++VVLF
Sbjct: 561 TLAEFLFGDEDALISLDMSEFSEKHTVSRLFGSPPGYVGYEEGGQLTEKVRRKPFSVVLF 620
Query: 485 DEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDL 544
DE+EKAHPD+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N+G+ I K G +GF
Sbjct: 621 DEVEKAHPDIFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNLGTRDISK-GFNLGFAA 679
Query: 545 DYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDR 604
D K + Y+R+K+ V EELKQ+FRPEFLNR+D+ +VF QL++ ++ +I D+M+ +V +R
Sbjct: 680 QGDVK-TGYDRMKAKVNEELKQHFRPEFLNRVDDTVVFHQLSEDDIIQIVDLMIAKVDER 738
Query: 605 LKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVI 664
LK +D+ L+++ + + ++GY+P GARPLRR I R +ED ++EK+L E++ G V+
Sbjct: 739 LKDRDMGLELSSTAKSLLAKKGYDPVLGARPLRRTIQREIEDILSEKILFGELRPGHIVV 798
Query: 665 VDVDSDG 671
VD + +G
Sbjct: 799 VDTEGEG 805
>gi|378549452|ref|ZP_09824668.1| hypothetical protein CCH26_05167 [Citricoccus sp. CH26A]
Length = 845
Score = 790 bits (2039), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/688 (57%), Positives = 521/688 (75%), Gaps = 19/688 (2%)
Query: 7 EAVGAGVGGGSSGNKMPT----LEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRT 62
E GAGV G P L+++G NLT A EGKLDPV+GR ++ERV+Q+L RRT
Sbjct: 153 ETAGAGVSSGGQSEGAPAGSVVLDQFGRNLTAAAREGKLDPVIGRAQEMERVMQVLSRRT 212
Query: 63 KNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEER 122
KNNP LIGEPGVGKTA+ EGLAQ I GDVP+T+ K++ TLD+G LVAG++YRG+FEER
Sbjct: 213 KNNPVLIGEPGVGKTAVVEGLAQAIVRGDVPETLTDKQLYTLDLGSLVAGSRYRGDFEER 272
Query: 123 LKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEY 182
LKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEY
Sbjct: 273 LKKVLKEIRTRGDIILFIDEIHTLVGAGAAEGAIDAASILKPMLARGELQTIGATTLDEY 332
Query: 183 RKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQ 242
RKHIEKD ALERRFQP++V EP+V+ET +IL+GLR+RYE HH++ T++AL +AA L+ +
Sbjct: 333 RKHIEKDAALERRFQPIQVNEPTVEETTEILRGLRDRYEAHHRVSITEDALKAAASLADR 392
Query: 243 YISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAG 302
Y+SDRFLPDKAIDLIDEAG+R+R++ P E +E + + ++ EK A+ GQDFE A
Sbjct: 393 YVSDRFLPDKAIDLIDEAGARLRIKRMTTPPEIKEYDSRIAEVRAEKEAAIDGQDFEGAA 452
Query: 303 ELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKV 359
LRD+E L + + K +E TE + EV+ I ++SA TGIPV K+
Sbjct: 453 HLRDQEQKLTDERNR---KEEEWRTGVTEG------IAEVNEDLIAEVLSASTGIPVFKL 503
Query: 360 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 419
+ +E+DRL ME +H+RVIGQDEA+K++S+AIRR R GLK+PNRP SFIF+GPTGVGK
Sbjct: 504 TEEETDRLRNMEAEIHQRVIGQDEAIKSLSQAIRRTRAGLKDPNRPSGSFIFAGPTGVGK 563
Query: 420 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 479
+ELAKALA + FG E+A+I LDMSEF E+HTVS+L G+PPGYVGY EGGQLTE VRRRP+
Sbjct: 564 TELAKALAEFLFGDEDALITLDMSEFQEKHTVSRLFGAPPGYVGYEEGGQLTEKVRRRPF 623
Query: 480 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 539
+VVLFDE+EKAH D+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N+G+ I K G
Sbjct: 624 SVVLFDEVEKAHADLFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNLGTKDISK-GVM 682
Query: 540 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 599
GF D + + Y+R+K V EEL+Q+FRPEFLNR+D++IVF QL+K E+ +I D+ +
Sbjct: 683 TGFQSAADTQ-TGYDRMKGKVQEELRQHFRPEFLNRVDDVIVFPQLSKDEIVQIVDLFVA 741
Query: 600 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 659
+ RL +D+ + +T+ +E + + GY+P++GARPLRR I L+ED ++EK+L EI
Sbjct: 742 RLQKRLDDQDLTITITKPAKEFLADRGYDPAFGARPLRRTIQHLVEDQLSEKILFGEITP 801
Query: 660 GDSVIVDVDSDGNVTVLNGSSGA-PESL 686
G S+ VD++ +G L S+ + PE++
Sbjct: 802 GSSITVDLEGEGEAAKLTFSTTSRPEAI 829
>gi|255520324|ref|ZP_05387561.1| endopeptidase Clp ATP-binding chain C [Listeria monocytogenes FSL
J1-175]
Length = 819
Score = 790 bits (2039), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/669 (58%), Positives = 517/669 (77%), Gaps = 16/669 (2%)
Query: 10 GAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLI 69
G G ++ PTL+ +LT +A E LDPV+GR +I+RV+++L RRTKNNP LI
Sbjct: 147 ATGAGRQTNTQATPTLDSLARDLTVIAREDNLDPVIGRSKEIQRVIEVLSRRTKNNPVLI 206
Query: 70 GEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEE 129
GEPGVGKTAIAEGLAQ+I +VP+T+ GK+V+TLDMG +VAGTKYRGEFE+RLKK+M+E
Sbjct: 207 GEPGVGKTAIAEGLAQQIVRNEVPETLRGKRVMTLDMGTVVAGTKYRGEFEDRLKKVMDE 266
Query: 130 IKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKD 189
I+Q+ +ILFIDE+HTLIGAG AEGAIDA+NILKP LARGELQCIGATTLDEYRK+IEKD
Sbjct: 267 IRQAGNVILFIDELHTLIGAGGAEGAIDASNILKPPLARGELQCIGATTLDEYRKYIEKD 326
Query: 190 PALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFL 249
ALERRFQP+KV EP+V+E+IQIL GLR+RYE HH++ TDEAL +A +LS +YISDRFL
Sbjct: 327 AALERRFQPIKVDEPTVEESIQILHGLRDRYEAHHRVAITDEALEAAVRLSDRYISDRFL 386
Query: 250 PDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREM 309
PDKAID+IDE+GS+VRL+ P+ +E+E L + KEK+ AV+GQ+FEKA LRD+E
Sbjct: 387 PDKAIDVIDESGSKVRLKSFTTPKNVKEMENNLSDLKKEKDAAVQGQEFEKAASLRDKEQ 446
Query: 310 DLKAQISALVDKGKEMSKA---ETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDR 366
LK K E +KA E + D V E+ + +V++WTGIPV K++ E+++
Sbjct: 447 KLK--------KSLEETKANWQEKQGLDHSEVTEEI-VAEVVASWTGIPVAKLAETETNK 497
Query: 367 LLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKAL 426
LL ME+ LH+RVIGQD AVKA+S A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+AL
Sbjct: 498 LLNMEKLLHERVIGQDAAVKAVSLAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARAL 557
Query: 427 AAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDE 486
A FG E++MIR+DMSE+ME+ + ++L+G+PPGYVGY EGGQLTE VR++PY+VVL DE
Sbjct: 558 AESMFGDEDSMIRIDMSEYMEKFSTARLVGAPPGYVGYEEGGQLTEKVRQKPYSVVLLDE 617
Query: 487 IEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDY 546
IEKAHPDVFNM+LQ+L+DGRLTDSKGR VDF+NT++IMTSN+G+ + K + +GF++
Sbjct: 618 IEKAHPDVFNMLLQVLDDGRLTDSKGRVVDFRNTVIIMTSNIGAQEM-KQDKSMGFNVID 676
Query: 547 DEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLK 606
KD + ++ V ++LKQ FRPEF+NR+DE IVF L + E+K+I ++ ++ RL
Sbjct: 677 PLKD--HKAMEHRVLQDLKQAFRPEFINRIDETIVFHSLQEKELKQIVTLLTAQLTKRLA 734
Query: 607 TKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVD 666
+DI +++TE + ++ ++GY+P YGARPL+RAI + +ED ++E++L IK GD V +
Sbjct: 735 ERDIHVKLTEGAKSKIAKDGYDPEYGARPLKRAIQKEVEDMLSEELLRGNIKVGDYVEIG 794
Query: 667 VDSDGNVTV 675
V DG + V
Sbjct: 795 V-KDGKLEV 802
>gi|254853501|ref|ZP_05242849.1| ClpC ATPase [Listeria monocytogenes FSL R2-503]
gi|258606873|gb|EEW19481.1| ClpC ATPase [Listeria monocytogenes FSL R2-503]
Length = 821
Score = 790 bits (2039), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/669 (58%), Positives = 517/669 (77%), Gaps = 16/669 (2%)
Query: 10 GAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLI 69
G G ++ PTL+ +LT +A E LDPV+GR +I+RV+++L RRTKNNP LI
Sbjct: 147 ATGAGRQTNTQATPTLDSLARDLTVIAREDNLDPVIGRSKEIQRVIEVLSRRTKNNPVLI 206
Query: 70 GEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEE 129
GEPGVGKTAIAEGLAQ+I +VP+T+ GK+V+TLDMG +VAGTKYRGEFE+RLKK+M+E
Sbjct: 207 GEPGVGKTAIAEGLAQQIVRNEVPETLRGKRVMTLDMGTVVAGTKYRGEFEDRLKKVMDE 266
Query: 130 IKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKD 189
I+Q+ +ILFIDE+HTLIGAG AEGAIDA+NILKP LARGELQCIGATTLDEYRK+IEKD
Sbjct: 267 IRQAGNVILFIDELHTLIGAGGAEGAIDASNILKPPLARGELQCIGATTLDEYRKYIEKD 326
Query: 190 PALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFL 249
ALERRFQP+KV EP+V+E+IQIL GLR+RYE HH++ TDEAL +A +LS +YISDRFL
Sbjct: 327 AALERRFQPIKVDEPTVEESIQILHGLRDRYEAHHRVAITDEALEAAVRLSDRYISDRFL 386
Query: 250 PDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREM 309
PDKAID+IDE+GS+VRL+ P+ +E+E L + KEK+ AV+GQ+FEKA LRD+E
Sbjct: 387 PDKAIDVIDESGSKVRLKSFTTPKNVKEMENNLSDLKKEKDAAVQGQEFEKAASLRDKEQ 446
Query: 310 DLKAQISALVDKGKEMSKA---ETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDR 366
LK K E +KA E + D V E+ + +V++WTGIPV K++ E+++
Sbjct: 447 KLK--------KSLEETKANWQEKQGLDHSEVTEEI-VAEVVASWTGIPVAKLAETETNK 497
Query: 367 LLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKAL 426
LL ME+ LH+RVIGQD AVKA+S A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+AL
Sbjct: 498 LLNMEKLLHERVIGQDAAVKAVSLAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARAL 557
Query: 427 AAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDE 486
A FG E++MIR+DMSE+ME+ + ++L+G+PPGYVGY EGGQLTE VR++PY+VVL DE
Sbjct: 558 AESMFGDEDSMIRIDMSEYMEKFSTARLVGAPPGYVGYEEGGQLTEKVRQKPYSVVLLDE 617
Query: 487 IEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDY 546
IEKAHPDVFNM+LQ+L+DGRLTDSKGR VDF+NT++IMTSN+G+ + K + +GF++
Sbjct: 618 IEKAHPDVFNMLLQVLDDGRLTDSKGRVVDFRNTVIIMTSNIGAQEM-KQDKSMGFNVID 676
Query: 547 DEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLK 606
KD + ++ V ++LKQ FRPEF+NR+DE IVF L + E+K+I ++ ++ RL
Sbjct: 677 PLKD--HKAMEHRVLQDLKQAFRPEFINRIDETIVFHSLQEKELKQIVTLLTAQLTKRLA 734
Query: 607 TKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVD 666
+DI +++TE + ++ ++GY+P YGARPL+RAI + +ED ++E++L IK GD V +
Sbjct: 735 ERDIHVKLTEGAKSKIAKDGYDPEYGARPLKRAIQKEVEDMLSEELLRGNIKVGDYVEIG 794
Query: 667 VDSDGNVTV 675
V DG + V
Sbjct: 795 V-KDGKLEV 802
>gi|46906465|ref|YP_012854.1| ClpC ATPase [Listeria monocytogenes serotype 4b str. F2365]
gi|47093952|ref|ZP_00231688.1| negative regulator of genetic competence ClpC/MecB [Listeria
monocytogenes str. 4b H7858]
gi|226222861|ref|YP_002756968.1| endopeptidase Clp ATP-binding chain C [Listeria monocytogenes
serotype 4b str. CLIP 80459]
gi|254825724|ref|ZP_05230725.1| ClpC ATPase [Listeria monocytogenes FSL J1-194]
gi|254932450|ref|ZP_05265809.1| ClpC ATPase [Listeria monocytogenes HPB2262]
gi|300764643|ref|ZP_07074635.1| ClpC ATPase [Listeria monocytogenes FSL N1-017]
gi|386730997|ref|YP_006204493.1| endopeptidase Clp ATP-binding chain C [Listeria monocytogenes
07PF0776]
gi|404279782|ref|YP_006680680.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes SLCC2755]
gi|404285599|ref|YP_006692185.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes serotype 7 str. SLCC2482]
gi|405748575|ref|YP_006672041.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes ATCC 19117]
gi|405751449|ref|YP_006674914.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes SLCC2378]
gi|405754317|ref|YP_006677781.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes SLCC2540]
gi|406703005|ref|YP_006753359.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes L312]
gi|417314282|ref|ZP_12100983.1| endopeptidase Clp ATP-binding chain C [Listeria monocytogenes
J1816]
gi|424713097|ref|YP_007013812.1| Negative regulator of genetic competence ClpC/MecB [Listeria
monocytogenes serotype 4b str. LL195]
gi|424821963|ref|ZP_18246976.1| Chaperone protein ClpB [Listeria monocytogenes str. Scott A]
gi|46879729|gb|AAT03031.1| ClpC ATPase [Listeria monocytogenes serotype 4b str. F2365]
gi|47017673|gb|EAL08470.1| negative regulator of genetic competence ClpC/MecB [Listeria
monocytogenes str. 4b H7858]
gi|225875323|emb|CAS04020.1| endopeptidase Clp ATP-binding chain C [Listeria monocytogenes
serotype 4b str. CLIP 80459]
gi|293584007|gb|EFF96039.1| ClpC ATPase [Listeria monocytogenes HPB2262]
gi|293594968|gb|EFG02729.1| ClpC ATPase [Listeria monocytogenes FSL J1-194]
gi|300514750|gb|EFK41805.1| ClpC ATPase [Listeria monocytogenes FSL N1-017]
gi|328467843|gb|EGF38883.1| endopeptidase Clp ATP-binding chain C [Listeria monocytogenes
J1816]
gi|332310643|gb|EGJ23738.1| Chaperone protein ClpB [Listeria monocytogenes str. Scott A]
gi|384389755|gb|AFH78825.1| endopeptidase Clp ATP-binding chain C [Listeria monocytogenes
07PF0776]
gi|404217775|emb|CBY69139.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes ATCC 19117]
gi|404220649|emb|CBY72012.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes SLCC2378]
gi|404223517|emb|CBY74879.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes SLCC2540]
gi|404226417|emb|CBY47822.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes SLCC2755]
gi|404244528|emb|CBY02753.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes serotype 7 str. SLCC2482]
gi|406360035|emb|CBY66308.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes L312]
gi|424012281|emb|CCO62821.1| Negative regulator of genetic competence ClpC/MecB [Listeria
monocytogenes serotype 4b str. LL195]
Length = 820
Score = 790 bits (2039), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/669 (58%), Positives = 517/669 (77%), Gaps = 16/669 (2%)
Query: 10 GAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLI 69
G G ++ PTL+ +LT +A E LDPV+GR +I+RV+++L RRTKNNP LI
Sbjct: 147 ATGAGRQTNTQATPTLDSLARDLTVIAREDNLDPVIGRSKEIQRVIEVLSRRTKNNPVLI 206
Query: 70 GEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEE 129
GEPGVGKTAIAEGLAQ+I +VP+T+ GK+V+TLDMG +VAGTKYRGEFE+RLKK+M+E
Sbjct: 207 GEPGVGKTAIAEGLAQQIVRNEVPETLRGKRVMTLDMGTVVAGTKYRGEFEDRLKKVMDE 266
Query: 130 IKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKD 189
I+Q+ +ILFIDE+HTLIGAG AEGAIDA+NILKP LARGELQCIGATTLDEYRK+IEKD
Sbjct: 267 IRQAGNVILFIDELHTLIGAGGAEGAIDASNILKPPLARGELQCIGATTLDEYRKYIEKD 326
Query: 190 PALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFL 249
ALERRFQP+KV EP+V+E+IQIL GLR+RYE HH++ TDEAL +A +LS +YISDRFL
Sbjct: 327 AALERRFQPIKVDEPTVEESIQILHGLRDRYEAHHRVAITDEALEAAVRLSDRYISDRFL 386
Query: 250 PDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREM 309
PDKAID+IDE+GS+VRL+ P+ +E+E L + KEK+ AV+GQ+FEKA LRD+E
Sbjct: 387 PDKAIDVIDESGSKVRLKSFTTPKNVKEMENNLSDLKKEKDAAVQGQEFEKAASLRDKEQ 446
Query: 310 DLKAQISALVDKGKEMSKA---ETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDR 366
LK K E +KA E + D V E+ + +V++WTGIPV K++ E+++
Sbjct: 447 KLK--------KSLEETKANWQEKQGLDHSEVTEEI-VAEVVASWTGIPVAKLAETETNK 497
Query: 367 LLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKAL 426
LL ME+ LH+RVIGQD AVKA+S A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+AL
Sbjct: 498 LLNMEKLLHERVIGQDAAVKAVSLAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARAL 557
Query: 427 AAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDE 486
A FG E++MIR+DMSE+ME+ + ++L+G+PPGYVGY EGGQLTE VR++PY+VVL DE
Sbjct: 558 AESMFGDEDSMIRIDMSEYMEKFSTARLVGAPPGYVGYEEGGQLTEKVRQKPYSVVLLDE 617
Query: 487 IEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDY 546
IEKAHPDVFNM+LQ+L+DGRLTDSKGR VDF+NT++IMTSN+G+ + K + +GF++
Sbjct: 618 IEKAHPDVFNMLLQVLDDGRLTDSKGRVVDFRNTVIIMTSNIGAQEM-KQDKSMGFNVID 676
Query: 547 DEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLK 606
KD + ++ V ++LKQ FRPEF+NR+DE IVF L + E+K+I ++ ++ RL
Sbjct: 677 PLKD--HKAMEHRVLQDLKQAFRPEFINRIDETIVFHSLQEKELKQIVTLLTAQLTKRLA 734
Query: 607 TKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVD 666
+DI +++TE + ++ ++GY+P YGARPL+RAI + +ED ++E++L IK GD V +
Sbjct: 735 ERDIHVKLTEGAKSKIAKDGYDPEYGARPLKRAIQKEVEDMLSEELLRGNIKVGDYVEIG 794
Query: 667 VDSDGNVTV 675
V DG + V
Sbjct: 795 V-KDGKLEV 802
>gi|422808348|ref|ZP_16856759.1| negative regulator of genetic competence ClpC/mecB [Listeria
monocytogenes FSL J1-208]
gi|378753382|gb|EHY63966.1| negative regulator of genetic competence ClpC/mecB [Listeria
monocytogenes FSL J1-208]
Length = 820
Score = 790 bits (2039), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/669 (58%), Positives = 517/669 (77%), Gaps = 16/669 (2%)
Query: 10 GAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLI 69
G G ++ PTL+ +LT +A E LDPV+GR +I+RV+++L RRTKNNP LI
Sbjct: 147 ATGAGRQTNTQATPTLDSLARDLTVIAREDNLDPVIGRSKEIQRVIEVLSRRTKNNPVLI 206
Query: 70 GEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEE 129
GEPGVGKTAIAEGLAQ+I +VP+T+ GK+V+TLDMG +VAGTKYRGEFE+RLKK+M+E
Sbjct: 207 GEPGVGKTAIAEGLAQQIVRNEVPETLRGKRVMTLDMGTVVAGTKYRGEFEDRLKKVMDE 266
Query: 130 IKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKD 189
I+Q+ +ILFIDE+HTLIGAG AEGAIDA+NILKP LARGELQCIGATTLDEYRK+IEKD
Sbjct: 267 IRQAGNVILFIDELHTLIGAGGAEGAIDASNILKPPLARGELQCIGATTLDEYRKYIEKD 326
Query: 190 PALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFL 249
ALERRFQP+KV EP+V+E+IQIL GLR+RYE HH++ TDEAL +A +LS +YISDRFL
Sbjct: 327 AALERRFQPIKVDEPTVEESIQILHGLRDRYEAHHRVAITDEALEAAVRLSDRYISDRFL 386
Query: 250 PDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREM 309
PDKAID+IDE+GS+VRL+ P+ +E+E L + KEK+ AV+GQ+FEKA LRD+E
Sbjct: 387 PDKAIDVIDESGSKVRLKSFTTPKNVKEMENNLSDLKKEKDAAVQGQEFEKAASLRDKEQ 446
Query: 310 DLKAQISALVDKGKEMSKA---ETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDR 366
LK K E +KA E + D V E+ + +V++WTGIPV K++ E+++
Sbjct: 447 KLK--------KSLEETKANWQEKQGLDHSEVTEEI-VAEVVASWTGIPVAKLAETETNK 497
Query: 367 LLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKAL 426
LL ME+ LH+RVIGQD AVKA+S A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+AL
Sbjct: 498 LLNMEKLLHERVIGQDAAVKAVSLAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARAL 557
Query: 427 AAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDE 486
A FG E++MIR+DMSE+ME+ + ++L+G+PPGYVGY EGGQLTE VR++PY+VVL DE
Sbjct: 558 AESMFGDEDSMIRIDMSEYMEKFSTARLVGAPPGYVGYEEGGQLTEKVRQKPYSVVLLDE 617
Query: 487 IEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDY 546
IEKAHPDVFNM+LQ+L+DGRLTDSKGR VDF+NT++IMTSN+G+ + K + +GF++
Sbjct: 618 IEKAHPDVFNMLLQVLDDGRLTDSKGRVVDFRNTVIIMTSNIGAQEM-KQDKSMGFNVID 676
Query: 547 DEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLK 606
KD + ++ V ++LKQ FRPEF+NR+DE IVF L + E+K+I ++ ++ RL
Sbjct: 677 PLKD--HKAMEHRVLQDLKQAFRPEFINRIDETIVFHSLQEKELKQIVTLLTSQLTKRLA 734
Query: 607 TKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVD 666
+DI +++TE + ++ ++GY+P YGARPL+RAI + +ED ++E++L IK GD V +
Sbjct: 735 ERDIHVKLTEGAKAKIAKDGYDPEYGARPLKRAIQKEVEDMLSEELLRGNIKVGDYVEIG 794
Query: 667 VDSDGNVTV 675
V DG + V
Sbjct: 795 V-KDGKLEV 802
>gi|422408257|ref|ZP_16485218.1| negative regulator of genetic competence ClpC/MecB [Listeria
monocytogenes FSL F2-208]
gi|313611199|gb|EFR86009.1| negative regulator of genetic competence ClpC/MecB [Listeria
monocytogenes FSL F2-208]
Length = 820
Score = 789 bits (2038), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/669 (58%), Positives = 517/669 (77%), Gaps = 16/669 (2%)
Query: 10 GAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLI 69
G G ++ PTL+ +LT +A E LDPV+GR +I+RV+++L RRTKNNP LI
Sbjct: 147 ATGAGRQTNTQATPTLDSLARDLTVIAREDNLDPVIGRSKEIQRVIEVLSRRTKNNPVLI 206
Query: 70 GEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEE 129
GEPGVGKTAIAEGLAQ+I +VP+T+ GK+V+TLDMG +VAGTKYRGEFE+RLKK+M+E
Sbjct: 207 GEPGVGKTAIAEGLAQQIVRNEVPETLRGKRVMTLDMGTVVAGTKYRGEFEDRLKKVMDE 266
Query: 130 IKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKD 189
I+Q+ +ILFIDE+HTLIGAG AEGAIDA+NILKP LARGELQCIGATTLDEYRK+IEKD
Sbjct: 267 IRQAGNVILFIDELHTLIGAGGAEGAIDASNILKPPLARGELQCIGATTLDEYRKYIEKD 326
Query: 190 PALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFL 249
ALERRFQP+KV EP+V+E+IQIL GLR+RYE HH++ TDEAL +A +LS +YISDRFL
Sbjct: 327 AALERRFQPIKVDEPTVEESIQILHGLRDRYEAHHRVAITDEALEAAVRLSDRYISDRFL 386
Query: 250 PDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREM 309
PDKAID+IDE+GS+VRL+ P+ +E+E L + KEK+ AV+GQ+FEKA LRD+E
Sbjct: 387 PDKAIDVIDESGSKVRLKSFTTPKNVKEMENNLSDLKKEKDAAVQGQEFEKAASLRDKEQ 446
Query: 310 DLKAQISALVDKGKEMSKA---ETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDR 366
LK K E +KA E + D V E+ + +V++WTGIPV K++ E+++
Sbjct: 447 KLK--------KSLEETKANWQEKQGLDHSEVTEEI-VAEVVASWTGIPVAKLAETETNK 497
Query: 367 LLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKAL 426
LL ME+ LH+RVIGQD AVKA+S A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+AL
Sbjct: 498 LLNMEKLLHERVIGQDAAVKAVSLAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARAL 557
Query: 427 AAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDE 486
A FG E++MIR+DMSE+ME+ + ++L+G+PPGYVGY EGGQLTE VR++PY+VVL DE
Sbjct: 558 AESMFGDEDSMIRIDMSEYMEKFSTARLVGAPPGYVGYEEGGQLTEKVRQKPYSVVLLDE 617
Query: 487 IEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDY 546
IEKAHPDVFNM+LQ+L+DGRLTDSKGR VDF+NT++IMTSN+G+ + K + +GF++
Sbjct: 618 IEKAHPDVFNMLLQVLDDGRLTDSKGRVVDFRNTVIIMTSNIGAQEM-KQDKSMGFNVID 676
Query: 547 DEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLK 606
KD + ++ V ++LKQ FRPEF+NR+DE IVF L + E+K+I ++ ++ RL
Sbjct: 677 PLKD--HKAMEHRVLQDLKQAFRPEFINRIDETIVFHSLQEKELKQIVTLLTAQLTKRLA 734
Query: 607 TKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVD 666
+DI +++TE + ++ ++GY+P YGARPL+RAI + +ED ++E++L IK GD V +
Sbjct: 735 ERDIHVKLTEGAKAKIAKDGYDPEYGARPLKRAIQKEVEDMLSEELLRGNIKVGDYVEIG 794
Query: 667 VDSDGNVTV 675
V DG + V
Sbjct: 795 V-KDGKLEV 802
>gi|430748562|ref|YP_007211470.1| chaperone ATPase [Thermobacillus composti KWC4]
gi|430732527|gb|AGA56472.1| ATPase with chaperone activity, ATP-binding subunit [Thermobacillus
composti KWC4]
Length = 818
Score = 789 bits (2038), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/680 (58%), Positives = 523/680 (76%), Gaps = 10/680 (1%)
Query: 5 STEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKN 64
S+EA+ + G ++ N PTL+ +LT A +G LDPV+GR +IERV+Q+L RRTKN
Sbjct: 144 SSEAISSSHGAPTNVN-TPTLDGLARDLTAAARDGNLDPVIGRSKEIERVIQVLSRRTKN 202
Query: 65 NPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLK 124
NP LIGEPGVGKTAIAEGLAQRI + ++P+T+ K+V+TLDMG +VAGTKYRGEFE+RLK
Sbjct: 203 NPVLIGEPGVGKTAIAEGLAQRIVANEIPETLRDKRVMTLDMGSVVAGTKYRGEFEDRLK 262
Query: 125 KLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRK 184
K+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKP+LARGELQCIGATTLDEYRK
Sbjct: 263 KIMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPALARGELQCIGATTLDEYRK 322
Query: 185 HIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYI 244
+IEKD ALERRFQP+ V +P+ +E IQIL GLR+RYE HH+++ TDEA+ +A +LS +YI
Sbjct: 323 YIEKDAALERRFQPIMVEQPTPEEAIQILHGLRDRYEAHHRVKITDEAIEAAVKLSDRYI 382
Query: 245 SDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGEL 304
+DRFLPDKAIDLIDEAGS+VRL +P ++LE L +I KEK+ AV+ Q+FEKA L
Sbjct: 383 TDRFLPDKAIDLIDEAGSKVRLHSYTVPPNLKQLEARLEEIRKEKDAAVQSQEFEKAAAL 442
Query: 305 RDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDES 364
RD E ++ ++ + KE + G VT DI +VS+WTGIPV K+ +E+
Sbjct: 443 RDTEQKIREELETTKNMWKE------KQGRTDSEVTPEDIAQVVSSWTGIPVSKLKEEET 496
Query: 365 DRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAK 424
+RLLKMEE LH RVIGQDEAVKA++RAIRRAR GLK+P RP+ SFIF GPTGVGK+ELA+
Sbjct: 497 ERLLKMEEILHSRVIGQDEAVKAVARAIRRARAGLKDPKRPMGSFIFLGPTGVGKTELAR 556
Query: 425 ALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLF 484
ALA FG E A+IR+DMSE+ME+H+ S+L+G+PPGYVGY EGGQLTE VRR+PY+VVL
Sbjct: 557 ALAEAMFGDENAVIRIDMSEYMEKHSTSRLVGAPPGYVGYEEGGQLTEKVRRKPYSVVLL 616
Query: 485 DEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDL 544
DEIEKAHP+VFN++LQ+LEDGRLTDSKGR VDF+NTL+IMTSNVG+ I++ +GF
Sbjct: 617 DEIEKAHPEVFNILLQVLEDGRLTDSKGRVVDFRNTLIIMTSNVGADQIKRNS-TLGFTA 675
Query: 545 DYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDR 604
D +N++K V ELK+ FRPEFLNR+DE IVF L + + +I +M E+ R
Sbjct: 676 VQD-SGREFNQMKDKVLAELKKAFRPEFLNRIDETIVFHSLEQEHINQIVTLMSDELRKR 734
Query: 605 LKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVI 664
L+ ++++ ++T+ + + +EG++P YGARPLRRAI + +ED ++E +L +IK+GD +
Sbjct: 735 LREQEVDFELTDAAKAFLAKEGFDPQYGARPLRRAIQKHIEDRLSEDLLLGKIKKGDKLT 794
Query: 665 VDVDSDGNVTVLNGSSGAPE 684
+D + +G + V+ S PE
Sbjct: 795 ID-ERNGELVVIPAGSITPE 813
>gi|83999833|emb|CAH60133.1| putative Clp-family ATP-binding protease [Streptomyces
tenjimariensis]
Length = 841
Score = 789 bits (2038), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/676 (58%), Positives = 523/676 (77%), Gaps = 16/676 (2%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTL--EEYGTNLTKLAEEGKLDPVVGRQPQIERVVQIL 58
+ G ST A GG + G +L +++G NLT+ A E KLDPV+GR+ +IERV+Q+L
Sbjct: 142 LSGYSTGKETATAGGPAEGTPSTSLVLDQFGRNLTQAARESKLDPVIGREKEIERVMQVL 201
Query: 59 GRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGE 118
RRTKNNP LIGEPGVGKTA+ EGLAQ I G+VP+T++ K + TLD+G LVAG++YRG+
Sbjct: 202 SRRTKNNPVLIGEPGVGKTAVVEGLAQAIVKGEVPETLKDKHLYTLDLGALVAGSRYRGD 261
Query: 119 FEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATT 178
FEERLKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATT
Sbjct: 262 FEERLKKVLKEIRTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIGATT 321
Query: 179 LDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQ 238
LDEYRK++EKD ALERRFQP++V EPS+ TI+ILKGLR+RYE HH++ TDEALV AA
Sbjct: 322 LDEYRKYLEKDAALERRFQPIQVAEPSLPHTIEILKGLRDRYEAHHRVSITDEALVQAAT 381
Query: 239 LSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDF 298
L+ +YISDRFLPDKAIDLIDEAGSR+R+R P + RE ++++ + ++K A+ QDF
Sbjct: 382 LADRYISDRFLPDKAIDLIDEAGSRMRIRRMTAPPDLREFDEKIAGVRRDKESAIDAQDF 441
Query: 299 EKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIP 355
EKA LRD+E L A K + E +AGD+ VV EVD I +++ TGIP
Sbjct: 442 EKAASLRDKEKQLLA--------AKAKREKEWKAGDM-DVVAEVDGELIAEVLATATGIP 492
Query: 356 VEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPT 415
V K++ +ES RLL+ME+ LHKRVIGQ++A+KA+S+AIRR R GLK+P RP SFIF+GP+
Sbjct: 493 VFKLTEEESSRLLRMEDELHKRVIGQEDAIKALSQAIRRTRAGLKDPKRPGGSFIFAGPS 552
Query: 416 GVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVR 475
GVGK+EL+K LA + FG E+AMI LDMSEF E+HTVS+L GSPPGYVGY EGGQLTE VR
Sbjct: 553 GVGKTELSKTLAEFLFGDEDAMISLDMSEFSEKHTVSRLFGSPPGYVGYEEGGQLTEKVR 612
Query: 476 RRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEK 535
R+P++VVLFDE+EKAHPD+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N+G+ I K
Sbjct: 613 RKPFSVVLFDEVEKAHPDIFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNLGTRDISK 672
Query: 536 GGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIAD 595
G +GF D K + Y R+K+ V EELKQ+FRPEFLNR+D+ +VF QL++ ++ +I D
Sbjct: 673 -GFNLGFAAQGDVK-TGYERMKAKVNEELKQHFRPEFLNRVDDTVVFHQLSQEDIIQIVD 730
Query: 596 IMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAR 655
+M+ +V +RLK +D+ +++++ + + + GY+P GARPLRR I R +ED ++EK+L
Sbjct: 731 LMIAKVDERLKDRDMGIELSQDAKILLAKRGYDPVLGARPLRRTIQREIEDVLSEKILFG 790
Query: 656 EIKEGDSVIVDVDSDG 671
E++ G V+VD + +G
Sbjct: 791 ELRPGHIVVVDTEGEG 806
>gi|269793848|ref|YP_003313303.1| chaperone ATPase [Sanguibacter keddieii DSM 10542]
gi|269096033|gb|ACZ20469.1| ATPase with chaperone activity, ATP-binding subunit [Sanguibacter
keddieii DSM 10542]
Length = 858
Score = 789 bits (2038), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/672 (59%), Positives = 524/672 (77%), Gaps = 16/672 (2%)
Query: 3 GESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRT 62
G+ A GA G +G+ + L+++G NLT+ A EGKLDPV+GR +IERV+Q+L RRT
Sbjct: 147 GKEPVASGAPAEGTPAGSAV--LDQFGRNLTQAAREGKLDPVIGRAKEIERVMQVLSRRT 204
Query: 63 KNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEER 122
KNNP LIGEPGVGKTA+ EGLAQ I SGDVP+T++ K++ TLD+G LVAG++YRG+FEER
Sbjct: 205 KNNPVLIGEPGVGKTAVVEGLAQDIVSGDVPETLKDKQLYTLDLGSLVAGSRYRGDFEER 264
Query: 123 LKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEY 182
LKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEY
Sbjct: 265 LKKVLKEIRTRGDIILFIDEIHTLVGAGAAEGAIDAASILKPMLARGELQTIGATTLDEY 324
Query: 183 RKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQ 242
RKHIEKD ALERRFQPV+V EPS+ I+ILKGLR+RYE HH++ TD ALV+AA L+ +
Sbjct: 325 RKHIEKDAALERRFQPVQVAEPSLPHAIEILKGLRDRYEAHHRVSITDSALVAAATLADR 384
Query: 243 YISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAG 302
Y++DRFLPDKAIDL+DEAG+R+R+R P E REL++++ + + K A+ QDFEKA
Sbjct: 385 YVNDRFLPDKAIDLVDEAGARLRIRRMTAPPELRELDEQIAEARRNKESAIDEQDFEKAA 444
Query: 303 ELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKV 359
LRD E L Q + DK K ++GD+ V EVD I +++ TGIPV K+
Sbjct: 445 GLRDTEKQLTQQRA---DKEKAW-----KSGDL-DTVAEVDEELIAEVLAMSTGIPVFKL 495
Query: 360 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 419
+ +ES RLLKME+ LHKRV+GQD A+K +S+AIRR R GLK+P RP SFIF+GPTGVGK
Sbjct: 496 TEEESSRLLKMEDELHKRVVGQDIAIKGLSQAIRRTRAGLKDPKRPGGSFIFAGPTGVGK 555
Query: 420 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 479
+ELAKALA + FG E+A+I+LDMSEF E+HTVS+L GSPPGYVGY EGGQLTE VRR+P+
Sbjct: 556 TELAKALAEFLFGDEDALIQLDMSEFSEKHTVSRLFGSPPGYVGYDEGGQLTEKVRRKPF 615
Query: 480 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 539
+VVLFDE+EKAH D+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N+G+ I K G +
Sbjct: 616 SVVLFDEVEKAHADIFNSLLQILEDGRLTDSQGRMVDFKNTVIIMTTNLGTRDIAK-GVQ 674
Query: 540 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 599
GF+ D +SY R+K+ V EELKQ+FRPEFLNR+D+ IVF QLT+ E+ +I D+M+
Sbjct: 675 TGFNAGGDTV-TSYERMKAKVNEELKQHFRPEFLNRVDDTIVFPQLTQDEIVKIVDLMIA 733
Query: 600 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 659
++ RL+ KD+ +++T + + E+GY+P GARPLRRAI R +ED ++EK+L +IK
Sbjct: 734 KLDGRLRDKDMGIELTPAAKILLSEKGYDPVLGARPLRRAIQREIEDVLSEKILFGDIKA 793
Query: 660 GDSVIVDVDSDG 671
G+ ++VD + +G
Sbjct: 794 GEMILVDAEGEG 805
>gi|295837256|ref|ZP_06824189.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Streptomyces
sp. SPB74]
gi|197699938|gb|EDY46871.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Streptomyces
sp. SPB74]
Length = 841
Score = 789 bits (2037), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/697 (57%), Positives = 528/697 (75%), Gaps = 16/697 (2%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTL--EEYGTNLTKLAEEGKLDPVVGRQPQIERVVQIL 58
+ G T A GG + G +L +++G NLT+ A E KLDPV+GR+ +IERV+Q+L
Sbjct: 142 LSGYQTGKETATAGGPAEGTPSTSLVLDQFGRNLTQAARESKLDPVIGREKEIERVMQVL 201
Query: 59 GRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGE 118
RRTKNNP LIGEPGVGKTA+ EGLAQ I G+VP+T++ K + TLD+G LVAG++YRG+
Sbjct: 202 SRRTKNNPVLIGEPGVGKTAVVEGLAQAIVKGEVPETLKDKHLYTLDLGALVAGSRYRGD 261
Query: 119 FEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATT 178
FEERLKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATT
Sbjct: 262 FEERLKKVLKEIRTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIGATT 321
Query: 179 LDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQ 238
L+EYRK++EKD ALERRFQP++V EPS+ TI+ILKGLR+RYE HH++ TD ALV+AA
Sbjct: 322 LEEYRKYLEKDAALERRFQPIQVAEPSLAHTIEILKGLRDRYEAHHRVSITDSALVAAAT 381
Query: 239 LSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDF 298
L+ +YISDRFLPDKAIDLIDEAGSR+R+R P + RE ++++ + ++K A+ QDF
Sbjct: 382 LADRYISDRFLPDKAIDLIDEAGSRMRIRRMTAPPDLREFDEKIAGVRRDKESAIDSQDF 441
Query: 299 EKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIP 355
EKA LRD+E L A K + E +AGD+ VV EVD I +++ TGIP
Sbjct: 442 EKAASLRDKEKQLLA--------AKAKREKEWKAGDM-DVVAEVDEELIAEVLATATGIP 492
Query: 356 VEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPT 415
V K++ +ES RLL+ME+ LHKRVIGQ++AVKA+S+AIRR R GLK+P RP SFIF+GP+
Sbjct: 493 VFKLTEEESSRLLRMEDELHKRVIGQEDAVKALSQAIRRTRAGLKDPKRPGGSFIFAGPS 552
Query: 416 GVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVR 475
GVGK+ELAK LA + FG E+A+I LDMSEF E+HTVS+L GSPPGYVGY EGGQLTE VR
Sbjct: 553 GVGKTELAKTLAEFLFGDEDALISLDMSEFSEKHTVSRLFGSPPGYVGYEEGGQLTEKVR 612
Query: 476 RRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEK 535
R+P++VVLFDE+EKAHPD+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N+G+ I K
Sbjct: 613 RKPFSVVLFDEVEKAHPDIFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNLGTRDISK 672
Query: 536 GGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIAD 595
G +GF + D K + Y R+K+ V EELKQ+FRPEFLNR+D+ +VF QLT+ ++ I D
Sbjct: 673 -GFNLGFAVQGDTK-TGYERMKAKVNEELKQHFRPEFLNRVDDTVVFPQLTEKDITRIVD 730
Query: 596 IMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAR 655
+M+ +V +RLK +D+ +++++ R+ + + GY+P GARPLRR I R +ED ++EK+L
Sbjct: 731 LMITKVDERLKDRDMGIELSQPARKLLGKRGYDPVLGARPLRRTIQREIEDVLSEKILFG 790
Query: 656 EIKEGDSVIVDVDSDGNVTVLNGSSGAPESLADPLPV 692
E++ G V+VD + +G +L D PV
Sbjct: 791 ELRPGHIVVVDTEGEGENETFTFRGEEKSTLPDAPPV 827
>gi|182437911|ref|YP_001825630.1| ATP-dependent Clp protease [Streptomyces griseus subsp. griseus
NBRC 13350]
gi|178466427|dbj|BAG20947.1| putative ATP-dependent Clp protease [Streptomyces griseus subsp.
griseus NBRC 13350]
Length = 842
Score = 789 bits (2037), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/697 (57%), Positives = 527/697 (75%), Gaps = 16/697 (2%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTL--EEYGTNLTKLAEEGKLDPVVGRQPQIERVVQIL 58
+ G S A GG + G +L +++G NLT+ A E KLDPV+GR+ +IERV+Q+L
Sbjct: 142 LSGYSGGKEAATAGGPAEGTPSTSLVLDQFGRNLTQAARESKLDPVIGREKEIERVMQVL 201
Query: 59 GRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGE 118
RRTKNNP LIGEPGVGKTA+ EGLAQ I G+VP+T++ K + TLD+G LVAG++YRG+
Sbjct: 202 SRRTKNNPVLIGEPGVGKTAVVEGLAQAIVKGEVPETLKDKHLYTLDLGALVAGSRYRGD 261
Query: 119 FEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATT 178
FEERLKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATT
Sbjct: 262 FEERLKKVLKEIRTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIGATT 321
Query: 179 LDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQ 238
LDEYRKH+EKD ALERRFQP++V EPS+ TI+ILKGLR+RYE HH++ TDEALV AA
Sbjct: 322 LDEYRKHLEKDAALERRFQPIQVAEPSLPHTIEILKGLRDRYEAHHRVSITDEALVQAAT 381
Query: 239 LSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDF 298
L+ +YISDRFLPDKAIDLIDEAGSR+R+R P + RE ++++ + ++K A+ QDF
Sbjct: 382 LADRYISDRFLPDKAIDLIDEAGSRMRIRRMTAPPDLREFDEKIAGVRRDKESAIDSQDF 441
Query: 299 EKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIP 355
EKA LRD+E L A K + E +AGD+ VV EVD I +++ TGIP
Sbjct: 442 EKAASLRDKEKQLLA--------AKAKREKEWKAGDM-DVVAEVDGELIAEVLATATGIP 492
Query: 356 VEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPT 415
V K++ +ES RLL+ME+ LHKRVIGQ +A+KA+S+AIRR R GLK+P RP SFIF+GP+
Sbjct: 493 VFKLTEEESSRLLRMEDELHKRVIGQKDAIKALSQAIRRTRAGLKDPKRPGGSFIFAGPS 552
Query: 416 GVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVR 475
GVGK+EL+K LA + FG E+A+I LDMSEF E+HTVS+L GSPPGYVGY EGGQLTE VR
Sbjct: 553 GVGKTELSKTLAEFLFGDEDALISLDMSEFSEKHTVSRLFGSPPGYVGYEEGGQLTEKVR 612
Query: 476 RRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEK 535
R+P++VVLFDE+EKAHPD+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N+G+ I K
Sbjct: 613 RKPFSVVLFDEVEKAHPDIFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNLGTRDISK 672
Query: 536 GGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIAD 595
G +GF D K ++Y R+K+ V EELKQ+FRPEFLNR+D+ +VF QLT+ ++ +I D
Sbjct: 673 -GFNLGFAAQGDVK-TNYERMKTKVNEELKQHFRPEFLNRVDDTVVFHQLTEEDIIQIVD 730
Query: 596 IMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAR 655
+ML +V +RLK +D+ ++++ + + ++GY+P GARPLRR I R +ED ++EK+L
Sbjct: 731 LMLAKVDERLKDRDMGIELSGEAKTLLAKKGYDPVMGARPLRRTIQRQIEDVLSEKILFG 790
Query: 656 EIKEGDSVIVDVDSDGNVTVLNGSSGAPESLADPLPV 692
E++ G V+V + +G+ +L D P+
Sbjct: 791 ELRPGHIVVVGTEGEGDDKTFTFRGEEKSALPDVPPI 827
>gi|347547703|ref|YP_004854031.1| putative endopeptidase Clp ATP-binding chain C [Listeria ivanovii
subsp. ivanovii PAM 55]
gi|346980774|emb|CBW84681.1| Putative endopeptidase Clp ATP-binding chain C [Listeria ivanovii
subsp. ivanovii PAM 55]
Length = 820
Score = 789 bits (2037), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/664 (58%), Positives = 513/664 (77%), Gaps = 10/664 (1%)
Query: 12 GVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGE 71
G G ++ PTL+ +LT +A E LDPV+GR +I+RV+++L RRTKNNP LIGE
Sbjct: 149 GAGRQTNTQATPTLDSLARDLTVIAREDNLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGE 208
Query: 72 PGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIK 131
PGVGKTAIAEGLAQ+I +VP+T+ GK+V+TLDMG +VAGTKYRGEFE+RLKK+M+EI+
Sbjct: 209 PGVGKTAIAEGLAQQIVRNEVPETLRGKRVMTLDMGTVVAGTKYRGEFEDRLKKVMDEIR 268
Query: 132 QSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPA 191
Q+ +ILFIDE+HTLIGAG AEGAIDA+NILKP LARGELQCIGATTLDEYRK+IEKD A
Sbjct: 269 QAGNVILFIDELHTLIGAGGAEGAIDASNILKPPLARGELQCIGATTLDEYRKYIEKDAA 328
Query: 192 LERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPD 251
LERRFQP+KV EP+V+E+IQIL GLR+RYE HH++ TD AL +A +LS +YISDRFLPD
Sbjct: 329 LERRFQPIKVDEPTVEESIQILHGLRDRYEAHHRVAITDAALDAAVRLSDRYISDRFLPD 388
Query: 252 KAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDL 311
KAID+IDEAGS+VRL+ P+ +E+E L + KEK+ AV+GQ+FEKA LRD+E L
Sbjct: 389 KAIDVIDEAGSKVRLKSFTTPKNVKEMENNLTDLKKEKDAAVQGQEFEKAAALRDKEHKL 448
Query: 312 KAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKME 371
K + KE + VTE + +V++WTGIPV K++ E+++LL ME
Sbjct: 449 KKSLEETKANWKEKQGLDHSE------VTEDIVAEVVASWTGIPVAKLAETETNKLLNME 502
Query: 372 ETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYF 431
+ LH+RVIGQD AVKA+S A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+ALA F
Sbjct: 503 KLLHERVIGQDAAVKAVSLAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMF 562
Query: 432 GSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAH 491
G E++MIR+DMSE+ME+ + ++L+G+PPGYVGY EGGQLTE VR++PY+VVL DEIEKAH
Sbjct: 563 GDEDSMIRIDMSEYMEKFSTARLVGAPPGYVGYEEGGQLTEKVRQKPYSVVLLDEIEKAH 622
Query: 492 PDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDS 551
PDVFNM+LQ+L+DGRLTDSKGR VDF+NT++IMTSN+G+ + K + +GF++ KD
Sbjct: 623 PDVFNMLLQVLDDGRLTDSKGRVVDFRNTVIIMTSNIGAQEM-KQDKSMGFNVIDPLKD- 680
Query: 552 SYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIE 611
+ ++ V ++LKQ FRPEF+NR+DE IVF L + E+K+I ++ ++ RL +DI
Sbjct: 681 -HKAMEHRVLQDLKQAFRPEFINRIDETIVFHSLQEKELKQIVTLLTAQLTKRLAERDIH 739
Query: 612 LQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDG 671
+++TE + ++ ++GY+P YGARPL+RAI + +ED ++E++L IK GD++ + V DG
Sbjct: 740 VKLTEGAKAKIAKDGYDPEYGARPLKRAIQKEVEDMLSEELLRGNIKVGDTIEIGV-KDG 798
Query: 672 NVTV 675
+ V
Sbjct: 799 KLKV 802
>gi|78043878|ref|YP_361153.1| negative regulator of genetic competence clpC/mecB
[Carboxydothermus hydrogenoformans Z-2901]
gi|77995993|gb|ABB14892.1| negative regulator of genetic competence clpC/mecB
[Carboxydothermus hydrogenoformans Z-2901]
Length = 811
Score = 789 bits (2037), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/668 (61%), Positives = 537/668 (80%), Gaps = 13/668 (1%)
Query: 11 AGVGGGSSGNK---MPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPC 67
+G GG + K PTL+E+G +LT LA E KLDPVVGR+ +IERV+Q+L RRTKNNP
Sbjct: 151 SGQAGGQAKKKAVRTPTLDEHGRDLTALARENKLDPVVGREKEIERVIQVLSRRTKNNPV 210
Query: 68 LIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLM 127
LIGEPGVGKTAI EGLAQRI VP+ + K+V+TLD+ +VAGTKYRGEFEERLKK++
Sbjct: 211 LIGEPGVGKTAIVEGLAQRIVQKKVPEILIDKRVVTLDLASMVAGTKYRGEFEERLKKVL 270
Query: 128 EEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIE 187
EEIK + +I+FIDE+HTLIGAGAAEGAIDAANILKPSLARGE+QC+GATTLDEYRK+IE
Sbjct: 271 EEIKNAGNVIVFIDEIHTLIGAGAAEGAIDAANILKPSLARGEIQCVGATTLDEYRKYIE 330
Query: 188 KDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDR 247
KDPALERRFQP+ V EP+V+ET++ILKGLR+RYE HH+++ TDEA+++AA+LS +YI+DR
Sbjct: 331 KDPALERRFQPIMVDEPTVEETVEILKGLRDRYEAHHRVKITDEAIIAAAKLSDRYITDR 390
Query: 248 FLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDR 307
FLPDKAIDLIDEA SRVRL P +ELE+++ +I KEK AV Q+FEKA +LRD+
Sbjct: 391 FLPDKAIDLIDEAASRVRLNAFTAPPNLKELEEKINEIRKEKEAAVAAQEFEKAAKLRDQ 450
Query: 308 EMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRL 367
E LKA++ + + E E D VTE DI IVS WTGIPV+K++ +ES+RL
Sbjct: 451 EQKLKAELEE------KKKEWEKEQSDHLLSVTEDDIAQIVSQWTGIPVKKLAEEESERL 504
Query: 368 LKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALA 427
LK+EE LH+RVIGQDEAVKA++RA+RRAR GLK+P RPI SFIF GPTGVGK+ELA+ALA
Sbjct: 505 LKLEEILHQRVIGQDEAVKAVARAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALA 564
Query: 428 AYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEI 487
FG E+A+IR+DMSE+ME+HTV++LIG+PPGYVGY EGGQLTEAVRR+PY+V+L DEI
Sbjct: 565 EALFGDEDALIRIDMSEYMEKHTVARLIGAPPGYVGYEEGGQLTEAVRRKPYSVILLDEI 624
Query: 488 EKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYD 547
EKAHP+VFN++LQ+LEDGRLTDSKGRTVDFKNT++IMTSN+G+ +I+K R+GF +
Sbjct: 625 EKAHPEVFNILLQVLEDGRLTDSKGRTVDFKNTVIIMTSNIGAHLIKKEA-RLGFK-NVA 682
Query: 548 EKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKT 607
++ + + L+ ELK+ FRPEFLNR+DE+IVF LT+ +K+I +MLKEV RL+
Sbjct: 683 DEKKEEDIKEKLMA-ELKRTFRPEFLNRIDEIIVFHSLTEEHLKQIVRLMLKEVGKRLEE 741
Query: 608 KDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDV 667
++++++ + E +++EGY+ ++GARPLRRAI +++ED ++E++L IK+GD+V +
Sbjct: 742 QEMKVEFDDSLIEVILKEGYDEAFGARPLRRAIQKIVEDKLSEELLLGNIKKGDTVKLYA 801
Query: 668 DSDGNVTV 675
+ DG + V
Sbjct: 802 E-DGQIKV 808
>gi|239988660|ref|ZP_04709324.1| putative ATP-dependent Clp protease [Streptomyces roseosporus NRRL
11379]
gi|291445649|ref|ZP_06585039.1| ATP-dependent Clp protease [Streptomyces roseosporus NRRL 15998]
gi|411006538|ref|ZP_11382867.1| ATP-dependent Clp protease [Streptomyces globisporus C-1027]
gi|291348596|gb|EFE75500.1| ATP-dependent Clp protease [Streptomyces roseosporus NRRL 15998]
Length = 842
Score = 789 bits (2037), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/693 (57%), Positives = 526/693 (75%), Gaps = 16/693 (2%)
Query: 3 GESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRT 62
G+ T A G G S + + L+++G NLT+ A E KLDPV+GR+ +IERV+Q+L RRT
Sbjct: 148 GKETAAAGGPAEGTPSTSLV--LDQFGRNLTQAARESKLDPVIGREKEIERVMQVLSRRT 205
Query: 63 KNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEER 122
KNNP LIGEPGVGKTA+ EGLAQ I G+VP+T++ K + TLD+G LVAG++YRG+FEER
Sbjct: 206 KNNPVLIGEPGVGKTAVVEGLAQAIVKGEVPETLKDKHLYTLDLGALVAGSRYRGDFEER 265
Query: 123 LKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEY 182
LKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEY
Sbjct: 266 LKKVLKEIRTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIGATTLDEY 325
Query: 183 RKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQ 242
RKH+EKD ALERRFQP++V EPS+ TI+ILKGLR+RYE HH++ TDEALV AA L+ +
Sbjct: 326 RKHLEKDAALERRFQPIQVAEPSLPHTIEILKGLRDRYEAHHRVSITDEALVQAATLADR 385
Query: 243 YISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAG 302
YISDRFLPDKAIDLIDEAGSR+R+R P + RE ++++ + ++K A+ QDFEKA
Sbjct: 386 YISDRFLPDKAIDLIDEAGSRMRIRRMTAPPDLREFDEKIAGVRRDKESAIDSQDFEKAA 445
Query: 303 ELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKV 359
LRD+E L A K + E +AGD+ VV EVD I +++ TGIPV K+
Sbjct: 446 SLRDKEKQLLA--------AKAKREKEWKAGDM-DVVAEVDGELIAEVLATATGIPVFKL 496
Query: 360 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 419
+ +ES RLL+ME+ LHKRVIGQ +A+KA+S+AIRR R GLK+P RP SFIF+GP+GVGK
Sbjct: 497 TEEESSRLLRMEDELHKRVIGQKDAIKALSQAIRRTRAGLKDPKRPGGSFIFAGPSGVGK 556
Query: 420 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 479
+EL+K LA + FG E+A+I LDMSEF E+HTVS+L GSPPGYVGY EGGQLTE VRR+P+
Sbjct: 557 TELSKTLAEFLFGDEDALISLDMSEFSEKHTVSRLFGSPPGYVGYEEGGQLTEKVRRKPF 616
Query: 480 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 539
+VVLFDE+EKAHPD+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N+G+ I K G
Sbjct: 617 SVVLFDEVEKAHPDIFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNLGTRDISK-GFN 675
Query: 540 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 599
+GF D K ++Y R+K V EELKQ+FRPEFLNR+D+ +VF QLT+ ++ +I D+ML
Sbjct: 676 LGFAAQGDVK-TNYERMKVKVNEELKQHFRPEFLNRVDDTVVFHQLTEEDIIQIVDLMLA 734
Query: 600 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 659
+V +RLK +D+ ++++ + + ++GY+P GARPLRR I R +ED ++EK+L E++
Sbjct: 735 KVDERLKDRDMGIELSGEAKTLLAKKGYDPVMGARPLRRTIQRQIEDVLSEKILFGELRP 794
Query: 660 GDSVIVDVDSDGNVTVLNGSSGAPESLADPLPV 692
G V+V + +G+ +L D P+
Sbjct: 795 GHIVVVGTEGEGDDKTFTFRGEEKSALPDVPPI 827
>gi|163938089|ref|YP_001642973.1| ATPase [Bacillus weihenstephanensis KBAB4]
gi|229131089|ref|ZP_04260001.1| Negative regulator of genetic competence [Bacillus cereus
BDRD-ST196]
gi|229165070|ref|ZP_04292865.1| Negative regulator of genetic competence [Bacillus cereus AH621]
gi|423485381|ref|ZP_17462063.1| chaperone ClpB [Bacillus cereus BtB2-4]
gi|423491106|ref|ZP_17467750.1| chaperone ClpB [Bacillus cereus CER057]
gi|423502098|ref|ZP_17478715.1| chaperone ClpB [Bacillus cereus CER074]
gi|423514654|ref|ZP_17491161.1| chaperone ClpB [Bacillus cereus HuA2-1]
gi|423514934|ref|ZP_17491415.1| chaperone ClpB [Bacillus cereus HuA2-4]
gi|423596971|ref|ZP_17572981.1| chaperone ClpB [Bacillus cereus VD048]
gi|423671531|ref|ZP_17646535.1| chaperone ClpB [Bacillus cereus VDM034]
gi|423672665|ref|ZP_17647604.1| chaperone ClpB [Bacillus cereus VDM062]
gi|163860286|gb|ABY41345.1| ATPase AAA-2 domain protein [Bacillus weihenstephanensis KBAB4]
gi|228618333|gb|EEK75363.1| Negative regulator of genetic competence [Bacillus cereus AH621]
gi|228652302|gb|EEL08227.1| Negative regulator of genetic competence [Bacillus cereus
BDRD-ST196]
gi|401151492|gb|EJQ58943.1| chaperone ClpB [Bacillus cereus CER074]
gi|401162031|gb|EJQ69390.1| chaperone ClpB [Bacillus cereus CER057]
gi|401168435|gb|EJQ75698.1| chaperone ClpB [Bacillus cereus HuA2-4]
gi|401218148|gb|EJR24832.1| chaperone ClpB [Bacillus cereus VD048]
gi|401291920|gb|EJR97585.1| chaperone ClpB [Bacillus cereus VDM034]
gi|401311525|gb|EJS16820.1| chaperone ClpB [Bacillus cereus VDM062]
gi|402441572|gb|EJV73522.1| chaperone ClpB [Bacillus cereus BtB2-4]
gi|402442054|gb|EJV73998.1| chaperone ClpB [Bacillus cereus HuA2-1]
Length = 811
Score = 789 bits (2037), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/669 (59%), Positives = 521/669 (77%), Gaps = 9/669 (1%)
Query: 5 STEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKN 64
S EA GG S+ PTL+ +LT +A E +LDPV+GR +I+RV+++L RRTKN
Sbjct: 144 SNEASSGHQGGSSTNANTPTLDSLARDLTVVARENRLDPVIGRSKEIQRVIEVLSRRTKN 203
Query: 65 NPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLK 124
NP LIGEPGVGKTAIAEGLAQ+I + +VP+T+ K+V+TLDMG +VAGTKYRGEFE+RLK
Sbjct: 204 NPVLIGEPGVGKTAIAEGLAQQIVNNEVPETLRDKRVMTLDMGTVVAGTKYRGEFEDRLK 263
Query: 125 KLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRK 184
K+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTLDEYRK
Sbjct: 264 KVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEYRK 323
Query: 185 HIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYI 244
+IEKD ALERRFQP+ V EP+++E++QILKGLR+RYE HH++ TD+A+ +A +LS +YI
Sbjct: 324 YIEKDAALERRFQPIHVDEPNLEESVQILKGLRDRYEAHHRVSITDDAIDAAVKLSDRYI 383
Query: 245 SDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGEL 304
+DRFLPDKAIDLIDEA S+VRLR P +ELE +L +I KEK+ AV+ Q+FEKA L
Sbjct: 384 TDRFLPDKAIDLIDEAASKVRLRSYTTPPNLKELEVKLEEIRKEKDAAVQSQEFEKAASL 443
Query: 305 RDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDES 364
RD E L+ ++ + KE + G VT DI ++VS WT IPV K++ E+
Sbjct: 444 RDMEQRLREKLEDTKRQWKE------KQGQENSEVTVEDIANVVSTWTRIPVSKLAQTET 497
Query: 365 DRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAK 424
D+LL +E LH R+IGQDEAV A+++A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+
Sbjct: 498 DKLLNLESILHDRLIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELAR 557
Query: 425 ALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLF 484
ALA FG E+AMIR+DMSE+ME+H+ S+L+GSPPGYVGY EGGQLTE VRR+PY+VVL
Sbjct: 558 ALAESMFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPYSVVLL 617
Query: 485 DEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDL 544
DE+EKAHPDVFN++LQ+LEDGRLTDSKGRTVDF+NT++IMTSNVG+ +++ + +GF++
Sbjct: 618 DEVEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTIVIMTSNVGADALKR-NKHLGFNV 676
Query: 545 DYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDR 604
+ +D Y+ +K V +ELK+ FRPEFLNR+DE+IVF L K ++EI +M+ ++ R
Sbjct: 677 QDESRD--YSDMKGKVMDELKKAFRPEFLNRIDEIIVFHMLEKKHIQEIVTLMVNQLVKR 734
Query: 605 LKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVI 664
LK ++IEL +TE + ++G++ YGARPLRRAI + +ED ++E++L I++G VI
Sbjct: 735 LKEQEIELHLTEGAISAIADKGFDREYGARPLRRAIQKHVEDRLSEELLKGAIEKGQKVI 794
Query: 665 VDVDSDGNV 673
D++ + V
Sbjct: 795 FDIEGESFV 803
>gi|326778547|ref|ZP_08237812.1| ATPase AAA-2 domain protein [Streptomyces griseus XylebKG-1]
gi|326658880|gb|EGE43726.1| ATPase AAA-2 domain protein [Streptomyces griseus XylebKG-1]
Length = 863
Score = 788 bits (2036), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/697 (57%), Positives = 527/697 (75%), Gaps = 16/697 (2%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTL--EEYGTNLTKLAEEGKLDPVVGRQPQIERVVQIL 58
+ G S A GG + G +L +++G NLT+ A E KLDPV+GR+ +IERV+Q+L
Sbjct: 163 LSGYSGGKEAATAGGPAEGTPSTSLVLDQFGRNLTQAARESKLDPVIGREKEIERVMQVL 222
Query: 59 GRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGE 118
RRTKNNP LIGEPGVGKTA+ EGLAQ I G+VP+T++ K + TLD+G LVAG++YRG+
Sbjct: 223 SRRTKNNPVLIGEPGVGKTAVVEGLAQAIVKGEVPETLKDKHLYTLDLGALVAGSRYRGD 282
Query: 119 FEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATT 178
FEERLKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATT
Sbjct: 283 FEERLKKVLKEIRTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIGATT 342
Query: 179 LDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQ 238
LDEYRKH+EKD ALERRFQP++V EPS+ TI+ILKGLR+RYE HH++ TDEALV AA
Sbjct: 343 LDEYRKHLEKDAALERRFQPIQVAEPSLPHTIEILKGLRDRYEAHHRVSITDEALVQAAT 402
Query: 239 LSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDF 298
L+ +YISDRFLPDKAIDLIDEAGSR+R+R P + RE ++++ + ++K A+ QDF
Sbjct: 403 LADRYISDRFLPDKAIDLIDEAGSRMRIRRMTAPPDLREFDEKIAGVRRDKESAIDSQDF 462
Query: 299 EKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIP 355
EKA LRD+E L A K + E +AGD+ VV EVD I +++ TGIP
Sbjct: 463 EKAASLRDKEKQLLA--------AKAKREKEWKAGDM-DVVAEVDGELIAEVLATATGIP 513
Query: 356 VEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPT 415
V K++ +ES RLL+ME+ LHKRVIGQ +A+KA+S+AIRR R GLK+P RP SFIF+GP+
Sbjct: 514 VFKLTEEESSRLLRMEDELHKRVIGQKDAIKALSQAIRRTRAGLKDPKRPGGSFIFAGPS 573
Query: 416 GVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVR 475
GVGK+EL+K LA + FG E+A+I LDMSEF E+HTVS+L GSPPGYVGY EGGQLTE VR
Sbjct: 574 GVGKTELSKTLAEFLFGDEDALISLDMSEFSEKHTVSRLFGSPPGYVGYEEGGQLTEKVR 633
Query: 476 RRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEK 535
R+P++VVLFDE+EKAHPD+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N+G+ I K
Sbjct: 634 RKPFSVVLFDEVEKAHPDIFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNLGTRDISK 693
Query: 536 GGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIAD 595
G +GF D K ++Y R+K+ V EELKQ+FRPEFLNR+D+ +VF QLT+ ++ +I D
Sbjct: 694 -GFNLGFAAQGDVK-TNYERMKTKVNEELKQHFRPEFLNRVDDTVVFHQLTEEDIIQIVD 751
Query: 596 IMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAR 655
+ML +V +RLK +D+ ++++ + + ++GY+P GARPLRR I R +ED ++EK+L
Sbjct: 752 LMLAKVDERLKDRDMGIELSGEAKTLLAKKGYDPVMGARPLRRTIQRQIEDVLSEKILFG 811
Query: 656 EIKEGDSVIVDVDSDGNVTVLNGSSGAPESLADPLPV 692
E++ G V+V + +G+ +L D P+
Sbjct: 812 ELRPGHIVVVGTEGEGDDKTFTFRGEEKSALPDVPPI 848
>gi|145596784|ref|YP_001161081.1| ATPase [Salinispora tropica CNB-440]
gi|145306121|gb|ABP56703.1| ATPase AAA-2 domain protein [Salinispora tropica CNB-440]
Length = 844
Score = 788 bits (2036), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/696 (57%), Positives = 532/696 (76%), Gaps = 19/696 (2%)
Query: 3 GESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRT 62
G+ A G G + + L+++G NLT+ A EGKLDPV+GR+ +IERV+Q+L RRT
Sbjct: 147 GKEPAAAGTAPGEAAPSTSL-VLDQFGRNLTQAAREGKLDPVIGREKEIERVMQVLSRRT 205
Query: 63 KNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEER 122
KNNP LIGEPGVGKTA+ EGL+QRI G+VP+T++ K++ TLD+G LVAG++YRG+FEER
Sbjct: 206 KNNPVLIGEPGVGKTAVVEGLSQRIVKGEVPETLKDKQLYTLDLGALVAGSRYRGDFEER 265
Query: 123 LKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEY 182
LKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEY
Sbjct: 266 LKKVLKEIRTRGDIILFIDEIHTLVGAGAAEGAIDAASILKPMLARGELQTIGATTLDEY 325
Query: 183 RKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQ 242
RKH+EKD ALERRFQP++V EPS+ TI+ILKGLR+RYE HH++ TD ALV+AA L+ +
Sbjct: 326 RKHLEKDAALERRFQPIQVGEPSLPHTIEILKGLRDRYEAHHRVSITDAALVAAATLADR 385
Query: 243 YISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAG 302
YISDRFLPDKAIDLIDEAG+R+R+R P + R+ ++ + Q+ ++K A+ QDFE+A
Sbjct: 386 YISDRFLPDKAIDLIDEAGARMRIRRMTAPPDLRDFDERIAQVRRDKESAIDAQDFERAA 445
Query: 303 ELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKV 359
+LRD E L Q K + E +AGD+ VVTEVD I ++ WTGIPV K+
Sbjct: 446 QLRDTEKQLLGQ--------KAQREKEWKAGDLD-VVTEVDDEQIAEVLGNWTGIPVYKL 496
Query: 360 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 419
+ +E+ RLL+ME+ LHKRVIGQ++AVKA+S+AIRR R GLK+P RP SFIF+GP+GVGK
Sbjct: 497 TEEETSRLLRMEDELHKRVIGQEDAVKAVSKAIRRTRAGLKDPKRPSGSFIFAGPSGVGK 556
Query: 420 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 479
+EL+KALA + FGSE+A+I+LDMSEF +R+TVS+L+G+PPGYVGY EGGQLTE VRRRP+
Sbjct: 557 TELSKALAEFLFGSEDALIQLDMSEFHDRYTVSRLVGAPPGYVGYDEGGQLTEKVRRRPF 616
Query: 480 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 539
+VVLFDEIEKAHPDVFN +LQILEDGRLTD +GR VDFKNT++I+T+N+G+ + K
Sbjct: 617 SVVLFDEIEKAHPDVFNTLLQILEDGRLTDGQGRIVDFKNTVIILTTNLGTRDVAK-AVS 675
Query: 540 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 599
+GF D+ DS+Y+R+K V +ELKQ+FRPEFLNR+D+ IVF QL E+ I DIM+
Sbjct: 676 LGFQAS-DDSDSNYDRMKQKVNDELKQHFRPEFLNRIDDTIVFHQLRHREILSIVDIMIG 734
Query: 600 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 659
+ +L+ KD+ L++T+ ++ + +G++P GARPLRR I R +ED+++E++L E+
Sbjct: 735 RIETQLRNKDMGLELTDNAKQYLATKGFDPVLGARPLRRTIQRDIEDNLSERILFNELNP 794
Query: 660 GDSVIVDVDSD----GNVTVLNGSSGAPESLADPLP 691
G VIVD D D + T+ + P L D +P
Sbjct: 795 GQIVIVDCDGDPTNIDSSTLTFRGTDKPADLPDAVP 830
>gi|365866162|ref|ZP_09405787.1| putative ATP-dependent Clp protease [Streptomyces sp. W007]
gi|364004427|gb|EHM25542.1| putative ATP-dependent Clp protease [Streptomyces sp. W007]
Length = 842
Score = 788 bits (2036), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/697 (57%), Positives = 527/697 (75%), Gaps = 16/697 (2%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTL--EEYGTNLTKLAEEGKLDPVVGRQPQIERVVQIL 58
+ G S A GG + G +L +++G NLT+ A E KLDPV+GR+ +IERV+Q+L
Sbjct: 142 LSGYSGGKEAATAGGPAEGTPSTSLVLDQFGRNLTQAARESKLDPVIGREKEIERVMQVL 201
Query: 59 GRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGE 118
RRTKNNP LIGEPGVGKTA+ EGLAQ I G+VP+T++ K + TLD+G LVAG++YRG+
Sbjct: 202 SRRTKNNPVLIGEPGVGKTAVVEGLAQAIVKGEVPETLKDKHLYTLDLGALVAGSRYRGD 261
Query: 119 FEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATT 178
FEERLKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATT
Sbjct: 262 FEERLKKVLKEIRTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIGATT 321
Query: 179 LDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQ 238
LDEYRKH+EKD ALERRFQP++V EPS+ TI+ILKGLR+RYE HH++ TDEALV AA
Sbjct: 322 LDEYRKHLEKDAALERRFQPIQVAEPSLPHTIEILKGLRDRYEAHHRVSITDEALVQAAT 381
Query: 239 LSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDF 298
L+ +YISDRFLPDKAIDLIDEAGSR+R+R P + RE ++++ + ++K A+ QDF
Sbjct: 382 LADRYISDRFLPDKAIDLIDEAGSRMRIRRMTAPPDLREFDEKIAGVRRDKESAIDSQDF 441
Query: 299 EKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIP 355
EKA LRD+E L A K + E +AGD+ VV EVD I +++ TGIP
Sbjct: 442 EKAASLRDKEKQLLA--------AKAKREKEWKAGDM-DVVAEVDGELIAEVLATATGIP 492
Query: 356 VEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPT 415
V K++ +ES RLL+ME+ LHKRVIGQ +A+KA+S+AIRR R GLK+P RP SFIF+GP+
Sbjct: 493 VFKLTEEESSRLLRMEDELHKRVIGQKDAIKALSQAIRRTRAGLKDPKRPGGSFIFAGPS 552
Query: 416 GVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVR 475
GVGK+EL+K LA + FG E+A+I LDMSEF E+HTVS+L GSPPGYVGY EGGQLTE VR
Sbjct: 553 GVGKTELSKTLAEFLFGDEDALISLDMSEFSEKHTVSRLFGSPPGYVGYEEGGQLTEKVR 612
Query: 476 RRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEK 535
R+P++VVLFDE+EKAHPD+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N+G+ I K
Sbjct: 613 RKPFSVVLFDEVEKAHPDIFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNLGTRDISK 672
Query: 536 GGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIAD 595
G +GF D K ++Y R+K+ V EELKQ+FRPEFLNR+D+ +VF QLT+ ++ +I D
Sbjct: 673 -GFNLGFAAQGDVK-TNYERMKTKVNEELKQHFRPEFLNRVDDTVVFHQLTEEDIIQIVD 730
Query: 596 IMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAR 655
+ML +V +RLK +D+ ++++ + + ++GY+P GARPLRR I R +ED ++EK+L
Sbjct: 731 LMLAKVDERLKDRDMGIELSGEAKMLLAKKGYDPVMGARPLRRTIQRQIEDILSEKILFG 790
Query: 656 EIKEGDSVIVDVDSDGNVTVLNGSSGAPESLADPLPV 692
E++ G V+V + +G+ +L D P+
Sbjct: 791 ELRPGHIVVVGTEGEGDDKTFTFRGEEKSALPDVPPI 827
>gi|163841921|ref|YP_001626326.1| hemolysin [Renibacterium salmoninarum ATCC 33209]
gi|162955397|gb|ABY24912.1| negative regulator of genetic competence [Renibacterium
salmoninarum ATCC 33209]
Length = 830
Score = 788 bits (2035), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/696 (58%), Positives = 526/696 (75%), Gaps = 19/696 (2%)
Query: 3 GESTEAVGAGVG---GGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 59
G+ T + G G G G +G+ + L+++G NLT+ A + KLDPV+GR+ ++ERV+QIL
Sbjct: 147 GKETASAGVGQGQQEGTPAGSVV--LDQFGRNLTQDARDNKLDPVIGREHEMERVMQILS 204
Query: 60 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 119
RRTKNNP LIGEPGVGKTA+ EGLAQ IA GDVPDTI+ K++ TLD+G LVAG++YRG+F
Sbjct: 205 RRTKNNPVLIGEPGVGKTAVVEGLAQAIARGDVPDTIKDKQLYTLDLGSLVAGSRYRGDF 264
Query: 120 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 179
EERLKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTL
Sbjct: 265 EERLKKVLKEIQTRGDIILFIDEIHTLVGAGAAEGAIDAASILKPKLARGELQTIGATTL 324
Query: 180 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 239
DEYRKHIEKD ALERRFQP++V EPSV I+ILKGLR+RYE HH++ TD AL SAA L
Sbjct: 325 DEYRKHIEKDAALERRFQPIQVKEPSVSHAIEILKGLRDRYEAHHRVSITDGALTSAATL 384
Query: 240 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 299
+ +YISDRFLPDKAIDLIDEAG+R+R+R P E +E++ E+ + +K A+ QDFE
Sbjct: 385 AERYISDRFLPDKAIDLIDEAGARLRIRRMTAPPELKEMDGEIASVKAQKEAAIDAQDFE 444
Query: 300 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPV 356
A LRD E L I+ DK + ++ VTEVD I +++ TGIPV
Sbjct: 445 GAAALRDTEQKL---ITERADKDRAWRTGGIDS------VTEVDEELIAEVLANSTGIPV 495
Query: 357 EKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTG 416
K++ +ES RLLKME+ LHKRV+GQDEA+K++S+AIRR R GLK+P RP SFIF+GPTG
Sbjct: 496 FKLTEEESGRLLKMEDELHKRVVGQDEAIKSLSQAIRRTRAGLKDPKRPGGSFIFAGPTG 555
Query: 417 VGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRR 476
VGK+ELAKALA + FG E+A+I LDMSE+ E+HTVS+L G+PPGYVGY EGGQLTE VRR
Sbjct: 556 VGKTELAKALAEFLFGEEDALITLDMSEYSEKHTVSRLFGAPPGYVGYEEGGQLTEKVRR 615
Query: 477 RPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKG 536
RP++VVLFDE+EKAH D+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N+G+ I K
Sbjct: 616 RPFSVVLFDEVEKAHADLFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNLGTRDISK- 674
Query: 537 GRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADI 596
GF D + + YNR+++ VTEELKQ+FRPEFLNR+D+++VF QLT+ E+ EI D+
Sbjct: 675 SVATGFQSGTDTQ-TGYNRMRARVTEELKQHFRPEFLNRVDDVVVFPQLTQDEIVEIVDM 733
Query: 597 MLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLARE 656
+ + RLK KD+ +++T + + GY+P+ GARPLRR I R +ED ++EK+L E
Sbjct: 734 FVARLELRLKEKDMGIELTAAAKALLATRGYDPAMGARPLRRTIQREIEDQLSEKILFGE 793
Query: 657 IKEGDSVIVDVDSDGNVTVLNGSSGAPESLADPLPV 692
+K G+ V+VDV+ DG+ + A + + PV
Sbjct: 794 LKAGEIVVVDVEGDGDEAKFTFAGTAKPRVPEIAPV 829
>gi|256397471|ref|YP_003119035.1| ATPase AAA [Catenulispora acidiphila DSM 44928]
gi|256363697|gb|ACU77194.1| ATPase AAA-2 domain protein [Catenulispora acidiphila DSM 44928]
Length = 850
Score = 788 bits (2035), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/664 (59%), Positives = 513/664 (77%), Gaps = 21/664 (3%)
Query: 25 LEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLA 84
L+++G NLT+ A EGKLDPV+GR+ +IERV+Q+L RRTKNNP LIGEPGVGKTA+ EGLA
Sbjct: 169 LDQFGRNLTQAAREGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLA 228
Query: 85 QRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVH 144
Q I G+VP+T++ K + TLD+G LVAG++YRG+FEERLKK+++EI+ +I+LFIDE+H
Sbjct: 229 QAIVKGEVPETLKDKHLYTLDLGALVAGSRYRGDFEERLKKVLKEIRTRGDIVLFIDELH 288
Query: 145 TLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEP 204
TL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEYRK++EKD ALERRFQP++V EP
Sbjct: 289 TLVGAGAAEGAIDAASILKPMLARGELQTIGATTLDEYRKYVEKDAALERRFQPIQVAEP 348
Query: 205 SVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRV 264
SV TI+ILKGLR+RYE HH++ TD ALV+AA L+ +YISDRFLPDKAIDLIDEAGSR+
Sbjct: 349 SVAHTIEILKGLRDRYEAHHRVSITDSALVAAATLAERYISDRFLPDKAIDLIDEAGSRM 408
Query: 265 RLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKE 324
R+R P + RE + ++ + KEK A+ QDFEKA LRD+E L+ K
Sbjct: 409 RIRRMTAPPDLREFDDKIANVRKEKESAIDAQDFEKAAALRDQEKQLQG--------AKA 460
Query: 325 MSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQ 381
+ E + GD+ VV EVD I +++ TGIPV K++ +E+ RLL+ME+ LHKRVIGQ
Sbjct: 461 RREKEWKQGDLD-VVAEVDEELIAEVLATATGIPVFKLTEEETSRLLRMEDELHKRVIGQ 519
Query: 382 DEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLD 441
++A+K +S+AIRR R GLK+P RP SFIF+GP+GVGK+ELAKALA + FG E+A+I+LD
Sbjct: 520 NQAIKGLSQAIRRTRAGLKDPKRPGGSFIFAGPSGVGKTELAKALAEFLFGDEDALIQLD 579
Query: 442 MSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQI 501
MSEF E+HTVS+L GSPPGYVGY EGGQLTE VRR+P++VVLFDE+EKAHPD+FN +LQI
Sbjct: 580 MSEFSEKHTVSRLFGSPPGYVGYEEGGQLTEKVRRKPFSVVLFDEVEKAHPDIFNSLLQI 639
Query: 502 LEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVT 561
LEDGRLTDS+GR VDFKNT++IMT+N+G+ I K G +GF D K + Y R+K+ V
Sbjct: 640 LEDGRLTDSQGRVVDFKNTVIIMTTNLGTRDISK-GFGLGFAASGDTK-APYERMKAKVN 697
Query: 562 EELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRER 621
+ELKQ+FRPEFLNR+D+ +VF QL++ ++ I D+M+ +V RLK KD+ + +T + +E
Sbjct: 698 DELKQHFRPEFLNRVDDTVVFPQLSQDDIVAIVDLMMSKVDGRLKDKDMGIVLTRKAKEL 757
Query: 622 VVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVD-------VDSDGNVT 674
+ GY+P GARPLRRAI R +ED ++EK+L EI+ G + VD V+SD T
Sbjct: 758 IASLGYDPVLGARPLRRAIQRHIEDPLSEKILFGEIRSGQLITVDENTETGAVESDQRFT 817
Query: 675 VLNG 678
G
Sbjct: 818 FKAG 821
>gi|308175906|ref|YP_003915312.1| ATP-dependent Clp protease ATP-binding subunit [Arthrobacter
arilaitensis Re117]
gi|307743369|emb|CBT74341.1| ATP-dependent Clp protease ATP-binding subunit [Arthrobacter
arilaitensis Re117]
Length = 840
Score = 788 bits (2035), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 398/695 (57%), Positives = 523/695 (75%), Gaps = 16/695 (2%)
Query: 3 GESTEAVGAGVGGGSSGNKMPT--LEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
G+ T + G GG G + L+++G NLT A EGKLDPV+GR+ ++ERV+Q+L R
Sbjct: 151 GKETASAGVSSGGQQEGTPAGSAVLDQFGRNLTAAAREGKLDPVIGREHEMERVMQVLSR 210
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNP LIGEPGVGKTA+ EGLAQ I GDVP+TI+ K++ TLD+G LVAG++YRG+FE
Sbjct: 211 RTKNNPVLIGEPGVGKTAVVEGLAQSIVRGDVPETIKDKQLYTLDLGSLVAGSRYRGDFE 270
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
ERLKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLD
Sbjct: 271 ERLKKVLKEIRTRGDIILFIDEIHTLVGAGAAEGAIDAASILKPMLARGELQTIGATTLD 330
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRK+IEKD ALERRFQP++V EPSV+ T QIL+GLR+RYE HH++ TD AL +AA L+
Sbjct: 331 EYRKNIEKDAALERRFQPIQVKEPSVELTTQILRGLRDRYEAHHRVTITDGALQAAATLA 390
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
++YISDRFLPDKA+DLIDEAG+R+R++ P +E+++E+ + EK A+ QDFE
Sbjct: 391 HRYISDRFLPDKAVDLIDEAGARLRIQRMTAPPALKEMDEEIATVRLEKEAAIDAQDFEG 450
Query: 301 AGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPV--VTEVDIQHIVSAWTGIPVEK 358
A LRD+E S L++ E K+ GD+ V VTE I +++ TGIPV K
Sbjct: 451 AASLRDKE-------SKLIEARNEKEKS-WRNGDMDEVSEVTEELIAEVLANSTGIPVVK 502
Query: 359 VSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVG 418
++ +ES RLL ME+ LHKRVIGQD A+KAIS+AIRR R GLK+PNRP SFIF+GPTGVG
Sbjct: 503 LTEEESSRLLNMEDELHKRVIGQDSAIKAISQAIRRTRAGLKDPNRPGGSFIFAGPTGVG 562
Query: 419 KSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRP 478
K+ELAKALA + FG EEA+I LDMSE+ E+HTVS+L G+PPGYVGY EGGQLTE VRRRP
Sbjct: 563 KTELAKALAEFLFGEEEALITLDMSEYSEKHTVSRLFGAPPGYVGYEEGGQLTEKVRRRP 622
Query: 479 YTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR 538
++VVLFDE+EKAH D+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N+G+ I K G
Sbjct: 623 FSVVLFDEVEKAHADLFNSLLQILEDGRLTDSQGRVVDFKNTIIIMTTNLGTRDISK-GV 681
Query: 539 RIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIML 598
GF D K + Y R+++ V EEL+Q+FRPEFLNR+D+ +VF QL + E++EI D+ +
Sbjct: 682 MTGFQSAADTK-TGYERMQAKVQEELRQHFRPEFLNRVDDTVVFPQLNQDEIEEIVDLFV 740
Query: 599 KEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIK 658
+ RLK +D+ +++T+ R + + GY+P+ GARPLRR I R +ED ++E++L +I
Sbjct: 741 ARLAKRLKDRDMTIELTQAARSLLAQRGYDPAMGARPLRRTIQRDIEDQLSERILFGQIV 800
Query: 659 EGDSVIVDVDSDGNVT--VLNGSSGAPESLADPLP 691
G + VDV+ +G + V + G + +P P
Sbjct: 801 AGQKITVDVEGEGELQKFVFHAEGGTGQLEGEPAP 835
>gi|116871616|ref|YP_848397.1| ClpB ATPase [Listeria welshimeri serovar 6b str. SLCC5334]
gi|116740494|emb|CAK19614.1| ClpB ATPase [Listeria welshimeri serovar 6b str. SLCC5334]
Length = 820
Score = 788 bits (2034), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/660 (58%), Positives = 514/660 (77%), Gaps = 13/660 (1%)
Query: 10 GAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLI 69
G G ++ PTL+ +LT +A E LDPV+GR +I+RV+++L RRTKNNP LI
Sbjct: 147 ATGAGRQTNTQATPTLDSLARDLTVIAREDNLDPVIGRSKEIQRVIEVLSRRTKNNPVLI 206
Query: 70 GEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEE 129
GEPGVGKTAIAEGLAQ+I +VP+T+ GK+V+TLDMG +VAGTKYRGEFE+RLKK+M+E
Sbjct: 207 GEPGVGKTAIAEGLAQQIVRNEVPETLRGKRVMTLDMGTVVAGTKYRGEFEDRLKKVMDE 266
Query: 130 IKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKD 189
I+Q+ +ILFIDE+HTLIGAG AEGAIDA+NILKP LARGELQCIGATTLDEYRK+IEKD
Sbjct: 267 IRQAGNVILFIDELHTLIGAGGAEGAIDASNILKPPLARGELQCIGATTLDEYRKYIEKD 326
Query: 190 PALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFL 249
ALERRFQP+KV EP+V+E+IQIL GLR+RYE HH++ TDEAL +A +LS +YISDRFL
Sbjct: 327 AALERRFQPIKVDEPTVEESIQILHGLRDRYEAHHRVAITDEALEAAVRLSDRYISDRFL 386
Query: 250 PDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREM 309
PDKAID+IDE+GS+VRL+ P+ +E+E L + KEK+ AV+GQ+FEKA LRD+E
Sbjct: 387 PDKAIDVIDESGSKVRLKSFTTPKNVKEMENNLTDLKKEKDAAVQGQEFEKAAALRDKEH 446
Query: 310 DLKAQISALVDKGKEMSKA--ETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRL 367
LK K E +KA + + G VTE + +V++WTGIPV K++ E+++L
Sbjct: 447 KLK--------KSLEETKANWQEKQGLDHSEVTEDIVAEVVASWTGIPVAKLAETETNKL 498
Query: 368 LKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALA 427
L ME+ LH+RVIGQD AVKA+S A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+ALA
Sbjct: 499 LNMEKLLHERVIGQDAAVKAVSLAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALA 558
Query: 428 AYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEI 487
FG E++MIR+DMSE+ME+ + ++L+G+PPGYVGY EGGQLTE VR++PY+VVL DEI
Sbjct: 559 ESMFGDEDSMIRIDMSEYMEKFSTARLVGAPPGYVGYEEGGQLTEKVRQKPYSVVLLDEI 618
Query: 488 EKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYD 547
EKAHPDVFNM+LQ+L+DGRLTDSKGR VDF+NT++IMTSN+G+ + K + +GF++
Sbjct: 619 EKAHPDVFNMLLQVLDDGRLTDSKGRVVDFRNTVIIMTSNIGAQEM-KQDKSMGFNVIDP 677
Query: 548 EKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKT 607
KD + ++ V ++LKQ FRPEF+NR+DE IVF L + E+K+I ++ ++ RL
Sbjct: 678 LKD--HKAMEHRVLQDLKQAFRPEFINRIDETIVFHSLQEKELKQIVTLLTSQLTKRLAE 735
Query: 608 KDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDV 667
+DI +++TE + ++ ++GY+P YGARPL+RAI + +ED ++E++L IK GD+V + V
Sbjct: 736 RDIHVKLTEGAKAKIAKDGYDPEYGARPLKRAIQKEVEDMLSEELLRGNIKVGDNVEIGV 795
>gi|269836528|ref|YP_003318756.1| ATPase AAA-2 domain-containing protein [Sphaerobacter thermophilus
DSM 20745]
gi|269785791|gb|ACZ37934.1| ATPase AAA-2 domain protein [Sphaerobacter thermophilus DSM 20745]
Length = 817
Score = 788 bits (2034), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/663 (58%), Positives = 514/663 (77%), Gaps = 11/663 (1%)
Query: 11 AGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIG 70
+G + K P ++ G +LT+ A +GKLDPV+GRQ +IERV+QIL RRTKNNP LIG
Sbjct: 149 SGYQQKAQATKTPYMDALGFDLTEAARQGKLDPVIGRQAEIERVMQILSRRTKNNPALIG 208
Query: 71 EPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEI 130
EPGVGKTAI EGLAQRI SGDVP+ ++ K+++ LD+G LVAGTKYRGEFEERLKK++ E+
Sbjct: 209 EPGVGKTAIVEGLAQRIVSGDVPEPLQNKRLVALDIGALVAGTKYRGEFEERLKKIVSEV 268
Query: 131 KQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDP 190
K++ ILFIDE+HTL+GAGAAEGA+DAANILKP+L+RGELQ IGATTLDEYRK+IE+D
Sbjct: 269 KETG-AILFIDELHTLVGAGAAEGAVDAANILKPALSRGELQTIGATTLDEYRKYIERDA 327
Query: 191 ALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLP 250
ALERRFQPV+V EP+V+ETI+IL+G+RERYE HHKL+ TDEAL SAA L+ +Y+ DRFLP
Sbjct: 328 ALERRFQPVQVEEPTVEETIEILRGIRERYEEHHKLKITDEALRSAAVLASRYVPDRFLP 387
Query: 251 DKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMD 310
DKAIDL+DEA SRVR+ + P +E ++ L + +E + AV GQ+FE A +LRDRE
Sbjct: 388 DKAIDLVDEAASRVRMYRSASPPSLKEAKRGLESLRRELDAAVSGQEFELAADLRDRERK 447
Query: 311 LKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKM 370
L+ +I+ L EM E + D P VTE DI +VS WTGIP+ +++T+E++RLL M
Sbjct: 448 LQGRIADL-----EMHWKEEQEND-EPQVTEEDIAQVVSMWTGIPLMRLATEETERLLHM 501
Query: 371 EETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYY 430
EE LH+R++GQ+EA+ +++A+RRAR GLK+P RPI SFIF GPTGVGK+ LA+ALA +
Sbjct: 502 EEALHERIVGQEEAISTMAKAVRRARAGLKDPRRPIGSFIFLGPTGVGKTLLARALAEFM 561
Query: 431 FGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKA 490
FGSE+A+I++DMSEFMERH VS+L+G+PPGY+GY EGGQLTEAVRR+ Y+V+L DEIEKA
Sbjct: 562 FGSEDALIKIDMSEFMERHNVSRLVGAPPGYIGYEEGGQLTEAVRRKSYSVILLDEIEKA 621
Query: 491 HPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKD 550
HP+ FNM+LQILEDG LTD+KGR VDF+NT++IMTSN+G+ +I++ G +GF + + ++
Sbjct: 622 HPEAFNMLLQILEDGNLTDAKGRRVDFRNTIIIMTSNIGAEMIQREG-TLGFAVASNPEE 680
Query: 551 ---SSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKT 607
Y +K V +LKQ FRPEFLNR+D +IVF LT ++ +I ++ LK + +L+
Sbjct: 681 RFQQEYQAMKDKVLGQLKQTFRPEFLNRIDGVIVFHPLTPEQIHQIVELELKRLRTQLQE 740
Query: 608 KDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDV 667
KDI+L+VTE + E GY+ +GARPLRR I L+ED +AE +L EG +V+VDV
Sbjct: 741 KDIKLEVTEAAMRLLGERGYDRQFGARPLRRIIQNLIEDPLAEGLLENRFPEGSTVVVDV 800
Query: 668 DSD 670
D
Sbjct: 801 RDD 803
>gi|302521030|ref|ZP_07273372.1| ATP-dependent chaperone ClpB [Streptomyces sp. SPB78]
gi|318061546|ref|ZP_07980267.1| ATP-dependent Clp protease [Streptomyces sp. SA3_actG]
gi|318076619|ref|ZP_07983951.1| ATP-dependent Clp protease [Streptomyces sp. SA3_actF]
gi|333025279|ref|ZP_08453343.1| putative ATP-dependent Clp protease [Streptomyces sp. Tu6071]
gi|302429925|gb|EFL01741.1| ATP-dependent chaperone ClpB [Streptomyces sp. SPB78]
gi|332745131|gb|EGJ75572.1| putative ATP-dependent Clp protease [Streptomyces sp. Tu6071]
Length = 841
Score = 788 bits (2034), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/697 (57%), Positives = 528/697 (75%), Gaps = 16/697 (2%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTL--EEYGTNLTKLAEEGKLDPVVGRQPQIERVVQIL 58
+ G T A GG + G +L +++G NLT+ A E KLDPV+GR+ +IERV+Q+L
Sbjct: 142 LSGYQTGKETATAGGPAEGTPSTSLVLDQFGRNLTQAARESKLDPVIGREKEIERVMQVL 201
Query: 59 GRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGE 118
RRTKNNP LIGEPGVGKTA+ EGLAQ I G+VP+T++ K + TLD+G LVAG++YRG+
Sbjct: 202 SRRTKNNPVLIGEPGVGKTAVVEGLAQAIVKGEVPETLKDKHLYTLDLGALVAGSRYRGD 261
Query: 119 FEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATT 178
FEERLKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATT
Sbjct: 262 FEERLKKVLKEIRTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIGATT 321
Query: 179 LDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQ 238
L+EYRK++EKD ALERRFQP++V EPS+ TI+ILKGLR+RYE HH++ TD ALV+AA
Sbjct: 322 LEEYRKYLEKDAALERRFQPIQVAEPSLAHTIEILKGLRDRYEAHHRVSITDSALVAAAT 381
Query: 239 LSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDF 298
L+ +YISDRFLPDKAIDLIDEAGSR+R+R P + RE ++++ + ++K A+ QDF
Sbjct: 382 LADRYISDRFLPDKAIDLIDEAGSRMRIRRMTAPPDLREFDEKIAGVRRDKESAIDSQDF 441
Query: 299 EKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIP 355
EKA LRD+E L A K + E +AGD+ VV EVD I +++ TGIP
Sbjct: 442 EKAASLRDKEKQLLA--------AKAKREKEWKAGDM-DVVAEVDEELIAEVLATATGIP 492
Query: 356 VEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPT 415
V K++ +ES RLL+ME+ LHKRVIGQ++AVKA+S+AIRR R GLK+P RP SFIF+GP+
Sbjct: 493 VFKLTEEESSRLLRMEDELHKRVIGQEDAVKALSQAIRRTRAGLKDPKRPGGSFIFAGPS 552
Query: 416 GVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVR 475
GVGK+ELAK LA + FG E+A+I LDMSEF E+HTVS+L GSPPGYVGY EGGQLTE VR
Sbjct: 553 GVGKTELAKTLAEFLFGDEDALISLDMSEFSEKHTVSRLFGSPPGYVGYEEGGQLTEKVR 612
Query: 476 RRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEK 535
R+P++VVLFDE+EKAHPD+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N+G+ I K
Sbjct: 613 RKPFSVVLFDEVEKAHPDIFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNLGTRDISK 672
Query: 536 GGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIAD 595
G +GF + D K + Y R+K+ V +ELKQ+FRPEFLNR+D+ +VF QLT+ ++ I D
Sbjct: 673 -GFNLGFAVQGDTK-TGYERMKAKVNDELKQHFRPEFLNRVDDTVVFPQLTEKDITRIVD 730
Query: 596 IMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAR 655
+M+ +V +RLK +D+ L++++ R+ + + GY+P GARPLRR I R +ED ++EK+L
Sbjct: 731 LMITKVDERLKDRDMGLELSQPARKLLGKRGYDPVLGARPLRRTIQREIEDVLSEKILFG 790
Query: 656 EIKEGDSVIVDVDSDGNVTVLNGSSGAPESLADPLPV 692
E++ G V+VD + +G +L D PV
Sbjct: 791 ELRPGHIVVVDTEGEGENENFTFRGEEKSTLPDAPPV 827
>gi|420164359|ref|ZP_14671089.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM095]
gi|394231748|gb|EJD77371.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM095]
Length = 773
Score = 788 bits (2034), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 376/627 (59%), Positives = 497/627 (79%), Gaps = 9/627 (1%)
Query: 16 GSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVG 75
+ N PTL+ +LT +A++G LDPVVGR +I RV+++L RRTKNNP LIGEPGVG
Sbjct: 154 ANKSNNTPTLDGLARDLTVIAKDGTLDPVVGRDKEITRVIEVLSRRTKNNPVLIGEPGVG 213
Query: 76 KTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDE 135
KTAIAEGLAQ I +VP+T++ K+V++LDMG +VAGTKYRGEFEERLKK+MEEI Q+
Sbjct: 214 KTAIAEGLAQAIVKNEVPETLKDKRVMSLDMGTVVAGTKYRGEFEERLKKVMEEIHQAGN 273
Query: 136 IILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERR 195
+ILFIDE+HTL+GAG AEGAIDA+NILKP+LARGELQCIGATTLDEYRK+IEKD ALERR
Sbjct: 274 VILFIDELHTLVGAGGAEGAIDASNILKPALARGELQCIGATTLDEYRKNIEKDAALERR 333
Query: 196 FQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAID 255
FQP++V EP+V++TI+ILKGLR+RYE HH++ +DEAL +AA+LS +Y+SDRFLPDKAID
Sbjct: 334 FQPIQVDEPTVEDTIEILKGLRDRYEAHHRINISDEALEAAAKLSDRYVSDRFLPDKAID 393
Query: 256 LIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQI 315
LIDEA S+VRL+ P +E+E+E+ ++ EK+ AV Q+FE A LRD++ L+ Q
Sbjct: 394 LIDEASSKVRLKSHTTPSNLKEIEQEIDKVKNEKDAAVHAQEFENAANLRDKQSKLEKQY 453
Query: 316 SALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLH 375
D E A+ G + ++E +I +++ WTGIP+ K++ ESDRLL +E+TLH
Sbjct: 454 E---DAKNEWKNAQ---GGLDTALSEENIAEVIAGWTGIPLTKINETESDRLLNLEDTLH 507
Query: 376 KRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEE 435
KRVIGQ++AV +IS+A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+ALA FG ++
Sbjct: 508 KRVIGQNDAVNSISKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGEDD 567
Query: 436 AMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVF 495
AMIR+DMSEFME+H VS+L+G+PPGYVG+ +GGQLTE VRR+PY+V+LFDEIEKAHPDVF
Sbjct: 568 AMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKVRRKPYSVILFDEIEKAHPDVF 627
Query: 496 NMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNR 555
N++LQ+L+DG LTD+KGRTVDF+NT++IMTSNVG+ ++ R GF + S Y
Sbjct: 628 NILLQVLDDGHLTDTKGRTVDFRNTVIIMTSNVGAQELQD-QRFAGF--GGASEGSDYET 684
Query: 556 IKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVT 615
++ + +ELK FRPEFLNR+D++IVF +LTK E+KEI +M+ ++ RL ++I + VT
Sbjct: 685 VRKTMMKELKNSFRPEFLNRVDDIIVFHKLTKDELKEIVTMMVNKLTHRLSEQNINIVVT 744
Query: 616 ERFRERVVEEGYNPSYGARPLRRAIMR 642
++ +E++ EEGY+P YGARPL RAI +
Sbjct: 745 DKAKEKIAEEGYDPEYGARPLIRAIQK 771
>gi|256372657|ref|YP_003110481.1| ATPase AAA-2 domain-containing protein [Acidimicrobium ferrooxidans
DSM 10331]
gi|256009241|gb|ACU54808.1| ATPase AAA-2 domain protein [Acidimicrobium ferrooxidans DSM 10331]
Length = 829
Score = 787 bits (2033), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 394/694 (56%), Positives = 525/694 (75%), Gaps = 18/694 (2%)
Query: 4 ESTEAVGAGVG---GGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
E VG G G G + P L+++G NLT++A + KLDPVVGR +IER++Q+L R
Sbjct: 146 EGRPTVGQGAGPSQGQDAPGGSPILDQFGRNLTQMARDRKLDPVVGRDNEIERMMQVLSR 205
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
R KNNP LIGEPGVGK+AI EGLAQRI +G+VPDT+ GK++ TLD+G LVAG++YRG+FE
Sbjct: 206 RQKNNPVLIGEPGVGKSAIVEGLAQRIVAGEVPDTLRGKQIYTLDLGALVAGSRYRGDFE 265
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
ERLKK+++E++ + IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATT+D
Sbjct: 266 ERLKKVLKEVRTKENIILFIDEIHTLVGAGAAEGAIDAASILKPMLARGELQTIGATTID 325
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRKH+EKD ALERRFQP+KV EPS+++T +ILKGLRERYE HH + TDEALV+AA ++
Sbjct: 326 EYRKHLEKDAALERRFQPIKVGEPSIEDTFEILKGLRERYEAHHNVTITDEALVAAANMA 385
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
+YISDRFLPDKAIDLIDEAGSR+R++ P E R++E +L + ++K A+ Q+F++
Sbjct: 386 DRYISDRFLPDKAIDLIDEAGSRLRIKRVTSPPELRQVENDLTRTRRDKEGAIARQNFDE 445
Query: 301 AGELRDREMDLKAQISALVDKGKEMSKAETEAGD--VGPVVTEVDIQHIVSAWTGIPVEK 358
A L RE S LV + E+ A GD G V EV I +++ WTGIPV +
Sbjct: 446 AKRLAARE-------SELVSRKAELEAAWKREGDERFGVVDEEV-IAEVLAMWTGIPVNQ 497
Query: 359 VSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVG 418
++ +E+ +LL+ME+ LH R++GQ+EA+ A+SRAIRR R GLK+P RP SFIF GPTGVG
Sbjct: 498 LTEEETSKLLRMEDELHHRIVGQEEAISALSRAIRRTRAGLKDPRRPSGSFIFLGPTGVG 557
Query: 419 KSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRP 478
K+ELAK LA + FG ++A+I+LDMSE+ME+HTV++L+G+PPGYVGY EGGQLTEAVRRRP
Sbjct: 558 KTELAKTLAEFLFGDQDALIQLDMSEYMEKHTVARLVGAPPGYVGYDEGGQLTEAVRRRP 617
Query: 479 YTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR 538
++VVLFDEIEKAHPD+FN +LQILEDGRLTD++GRTVDFKNT+LIMTSN+G+ + +
Sbjct: 618 FSVVLFDEIEKAHPDIFNTLLQILEDGRLTDAQGRTVDFKNTILIMTSNLGTQDLHRA-- 675
Query: 539 RIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIML 598
++GF +D ++ R+K + E LK +F+PEFLNR+DE+IVF +L + EV I ++
Sbjct: 676 QVGF--AKSSEDVNHERMKMRLNEALKTHFKPEFLNRIDEVIVFHELRRDEVMAIVSLLF 733
Query: 599 KEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIK 658
+ V D+L+ K I +++TE + + + GY+ GARPLRR I RL+ED +AE++L +E K
Sbjct: 734 RRVQDQLQAKGIGIELTEAAKGFLADRGYDRELGARPLRRTIQRLVEDPLAERLLHQEFK 793
Query: 659 EGDSVIVDVDSDGNV-TVLNGSSGAPESLADPLP 691
GD V+VDV+ + V V+ G P LA P
Sbjct: 794 AGDMVVVDVEGEEIVFRVMEGLEPPPMELAGSNP 827
>gi|206901239|ref|YP_002251189.1| negative regulator of genetic competence ClpC/mecB [Dictyoglomus
thermophilum H-6-12]
gi|206740342|gb|ACI19400.1| negative regulator of genetic competence ClpC/mecB [Dictyoglomus
thermophilum H-6-12]
Length = 823
Score = 787 bits (2032), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/651 (58%), Positives = 513/651 (78%), Gaps = 12/651 (1%)
Query: 24 TLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGL 83
TL+E+G +LT+LA +GKLDP++GR+ ++ER++QIL RRTKNNP L+GEPGVGKTAI EGL
Sbjct: 174 TLDEFGRDLTQLARQGKLDPIIGREKELERIIQILSRRTKNNPVLVGEPGVGKTAIVEGL 233
Query: 84 AQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEV 143
AQ+I GDVPDT+ K+++ +DMG +VAGTKYRGEFEER+++++EE+K + ++ILFIDE+
Sbjct: 234 AQKIVEGDVPDTLLNKRIVAIDMGSIVAGTKYRGEFEERMQRIIEEVKMAKDVILFIDEI 293
Query: 144 HTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPE 203
HTL+GAGAAEGA+DAANILKPSLA+GE+Q IGATT EYRK+IEKD ALERRFQP+ V E
Sbjct: 294 HTLVGAGAAEGAVDAANILKPSLAKGEIQLIGATTPSEYRKYIEKDGALERRFQPIMVDE 353
Query: 204 PSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSR 263
P+ +ETIQILKGL+ERYE +H+++ TDEA+ A +LS +YI+DRFLPDKAID+IDEA +R
Sbjct: 354 PTPEETIQILKGLKERYENYHRVKITDEAIEEAVKLSVRYITDRFLPDKAIDVIDEASAR 413
Query: 264 VRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGK 323
VRLR + ++ LE EL +I ++K A+R Q FE+A +LRD E ++ + +D
Sbjct: 414 VRLRKQKNTAQS-NLELELARIREQKEIAIRNQAFERAAQLRDEERKIEEYLRNFIDT-- 470
Query: 324 EMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDE 383
T + G VVT D+ +V+ WTGIPV ++ +E +RLL+MEE LHKR+I QDE
Sbjct: 471 ------TAPSNFG-VVTPEDVAQVVATWTGIPVAQLLIEERERLLRMEEELHKRIISQDE 523
Query: 384 AVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMS 443
AV+ +SRAIRR+R GLK+P RPI F+F GPTGVGK+ELA+ALA Y FG+E A+IR DMS
Sbjct: 524 AVRVVSRAIRRSRSGLKDPRRPIGVFMFLGPTGVGKTELARALAEYLFGNENALIRFDMS 583
Query: 444 EFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILE 503
EFME+HTVS+LIG+PPGYVGY EGGQLTE V RRPY+V+L DEIEKAH DVFN++LQI++
Sbjct: 584 EFMEKHTVSRLIGAPPGYVGYEEGGQLTEKVHRRPYSVILLDEIEKAHSDVFNILLQIMD 643
Query: 504 DGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEE 563
+G+LTD GR V FKNT+LIMTSN G+ ++ IGF ++++ S+++IK L+ E
Sbjct: 644 EGQLTDGHGRRVSFKNTILIMTSNFGAEYFKQEA-SIGF-ASKEDREKSFDKIKELILSE 701
Query: 564 LKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVV 623
+K+YFRPEFLNRLDE++ FR LTK ++K+I +++LK V +RL+ K ++L++++ +E ++
Sbjct: 702 MKKYFRPEFLNRLDEIVFFRPLTKDDLKQILELLLKPVRERLREKRLDLEISDEVKEFLL 761
Query: 624 EEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVT 674
E+GY+P YGARPL+R I +ED +AE +L E KEGD + ++D GN+
Sbjct: 762 EKGYDPQYGARPLKRTIQYYMEDPLAEFILQGEFKEGDVIKAELDKKGNIV 812
>gi|256831690|ref|YP_003160417.1| ATPase AAA-2 domain-containing protein [Jonesia denitrificans DSM
20603]
gi|256685221|gb|ACV08114.1| ATPase AAA-2 domain protein [Jonesia denitrificans DSM 20603]
Length = 842
Score = 787 bits (2032), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/671 (58%), Positives = 519/671 (77%), Gaps = 14/671 (2%)
Query: 4 ESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTK 63
+ E VG+G + L+++G NLT+ A EGKLDPV+GR +IERV+Q+L RRTK
Sbjct: 146 QGKEPVGSGAPNEPTPAGSAVLDQFGRNLTQAAREGKLDPVIGRGKEIERVMQVLSRRTK 205
Query: 64 NNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERL 123
NNP LIGEPGVGKTA+ EGLAQ I +GDVP+T++ K++ TLD+G LVAG++YRG+FEERL
Sbjct: 206 NNPILIGEPGVGKTAVVEGLAQDIVAGDVPETLKDKQLYTLDLGALVAGSRYRGDFEERL 265
Query: 124 KKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYR 183
KK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ +GATTLDEYR
Sbjct: 266 KKVLKEIRTRGDIILFIDEIHTLVGAGAAEGAIDAASILKPMLARGELQTVGATTLDEYR 325
Query: 184 KHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQY 243
KHIEKDPALERRFQP++V EPS+ I+ILKGLR+RYE HH++ TD+ALV+AA L+ +Y
Sbjct: 326 KHIEKDPALERRFQPIQVAEPSLPHAIEILKGLRDRYEAHHRVSITDDALVAAATLADRY 385
Query: 244 ISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGE 303
I+DR+LPDKAIDL+DEAG+R+R+R P E REL++ + +EK A+ QDFEKA
Sbjct: 386 INDRYLPDKAIDLVDEAGARLRIRRMTAPPELRELDERIADARREKESAIDEQDFEKAAA 445
Query: 304 LRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKVS 360
LRD+E +L I DK K + + V+EVD I +++ TGIPV +++
Sbjct: 446 LRDKEKNL---IQERQDKEKAWKNGDLD------TVSEVDEDLIAEVLAMSTGIPVTRLN 496
Query: 361 TDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 420
+ES R+L ME LHKRV+GQ+ A+KA+S+AIRR R GLK+P RP SFIF+GPTGVGK+
Sbjct: 497 AEESQRILNMEAELHKRVVGQNRAIKALSQAIRRTRAGLKDPKRPGGSFIFAGPTGVGKT 556
Query: 421 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 480
ELAKALA Y F E+A+I+LDMSEF E+HT S+L GSPPGYVGY EGGQLTE VRR+P++
Sbjct: 557 ELAKALAEYLFDDEDALIQLDMSEFGEKHTASRLFGSPPGYVGYDEGGQLTEKVRRKPFS 616
Query: 481 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI 540
VVLFDE+EKAH D+FN +LQILE+GRLTDS+GR VDFKNT++IMT+N+GS + K G ++
Sbjct: 617 VVLFDEVEKAHADIFNSLLQILEEGRLTDSQGRVVDFKNTVIIMTTNLGSKDVAK-GVQV 675
Query: 541 GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 600
GF+++ D ++Y R+KS V EELKQ+FRPEFLNR+D++IVF QL++ E+ +I D+M+ +
Sbjct: 676 GFNVNNDAT-TTYERMKSKVNEELKQHFRPEFLNRVDDVIVFPQLSREEILKIVDLMVAK 734
Query: 601 VFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEG 660
+ RL K + +++T+ ++ + E+GY+P GARPLRRAI R +ED ++EK+L E G
Sbjct: 735 LNVRLADKAMSIELTDAAKKLLSEKGYDPVLGARPLRRAIQRDIEDVLSEKLLFGEFGAG 794
Query: 661 DSVIVDVDSDG 671
D ++VD +G
Sbjct: 795 DIIVVDAQGEG 805
>gi|339626578|ref|YP_004718221.1| class III stress response-related ATPase [Sulfobacillus acidophilus
TPY]
gi|379006033|ref|YP_005255484.1| ATPase AAA-2 domain-containing protein [Sulfobacillus acidophilus
DSM 10332]
gi|339284367|gb|AEJ38478.1| class III stress response-related ATPase [Sulfobacillus acidophilus
TPY]
gi|361052295|gb|AEW03812.1| ATPase AAA-2 domain protein [Sulfobacillus acidophilus DSM 10332]
Length = 823
Score = 787 bits (2032), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/667 (59%), Positives = 518/667 (77%), Gaps = 12/667 (1%)
Query: 23 PTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEG 82
PTL+ YG +LT++A EGKLDPV+GR + ERV+QIL RRTKNNP LIGEPGVGKTA+ EG
Sbjct: 163 PTLDLYGRDLTQMAREGKLDPVIGRDKEAERVIQILSRRTKNNPVLIGEPGVGKTAVVEG 222
Query: 83 LAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDE 142
LAQRI VP+ ++ ++V+ LD+G ++AG+KYRGEFE+RLK+ M EI+++ +ILFIDE
Sbjct: 223 LAQRIVENKVPEILKDRRVVALDLGAMLAGSKYRGEFEDRLKRAMNEIREAKNVILFIDE 282
Query: 143 VHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVP 202
+HT++GAGAAEGAIDAANILKP+LARGELQ IGATTLDEYRK+IE+DPALERRFQP+ V
Sbjct: 283 MHTIVGAGAAEGAIDAANILKPALARGELQAIGATTLDEYRKYIERDPALERRFQPIMVE 342
Query: 203 EPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGS 262
EPS +E +QILKGLR+RYE HH++ TD+A+ +A LS +Y+SDRFLPDKAIDLIDEA S
Sbjct: 343 EPSAEEAVQILKGLRDRYEAHHRVNITDDAIEAAVHLSDRYVSDRFLPDKAIDLIDEAAS 402
Query: 263 RVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKG 322
RVRL+ P + ++L +L +I KEK AV+ Q+FEKA ++RD E L+ ++ +
Sbjct: 403 RVRLKSYVAPPDLKDLADKLEEIRKEKEAAVQAQEFEKAAQMRDEEQKLREELERQTHEW 462
Query: 323 KEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQD 382
+ ET VT DI HIVS+WTGIPVE+++++ES+RLL +EE LH+RV+GQ+
Sbjct: 463 HNRQRVET------ITVTPDDIAHIVSSWTGIPVERLASEESERLLNLEEELHRRVVGQE 516
Query: 383 EAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDM 442
EAV+A+SRAIRRAR GLKNP RPI SF+F GPTGVGKSELAKALA FG E+AMI +DM
Sbjct: 517 EAVRAVSRAIRRARAGLKNPRRPIGSFLFLGPTGVGKSELAKALAQALFGDEDAMITIDM 576
Query: 443 SEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQIL 502
SE+MERH VS+L+G+PPGYVGY EGGQLTEAVRR PY+VVL DEIEKAHP+VFN++LQ+L
Sbjct: 577 SEYMERHAVSRLVGAPPGYVGYEEGGQLTEAVRRHPYSVVLLDEIEKAHPEVFNILLQVL 636
Query: 503 EDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTE 562
E+GRLT++KGR VDF+NT++IMTSNVG+ VI++ IGF D +E ++Y +K + +
Sbjct: 637 EEGRLTEAKGRAVDFRNTVIIMTSNVGAEVIKRQA-TIGFRKDTEE--TAYRDMKDRLMD 693
Query: 563 ELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERV 622
E+K FRPEF+NR+DE+IVF +L++ + EI IMLKEV DR+ L V++ + +
Sbjct: 694 EVKHTFRPEFINRVDEIIVFHELSEKHLAEIVGIMLKEVEDRIGQNGYRLTVSDAAKAII 753
Query: 623 VEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVT--VLNGSS 680
+EG++P +GARPLRRAI L+ED +AE++LA + EG + VD + DG + +
Sbjct: 754 AKEGFDPVFGARPLRRAIQHLVEDELAEQILAGKFAEGAHIYVDAE-DGKLVFRTMTEHD 812
Query: 681 GAPESLA 687
A ES+A
Sbjct: 813 SAMESIA 819
>gi|378824547|ref|YP_005089717.1| clpC gene product (chloroplast) [Synedra acus]
gi|371572746|gb|AEX37842.1| Clp protease ATP binding subunit (chloroplast) [Synedra acus]
Length = 1107
Score = 787 bits (2032), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/674 (57%), Positives = 513/674 (76%), Gaps = 33/674 (4%)
Query: 19 GNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTA 78
G++ PTL+E+ N+TK A +GKLDPV+GR+ +I ++ +L RRTKNNP LIGEPGVGKTA
Sbjct: 167 GSQTPTLDEFSENITKEAVDGKLDPVIGREKEINDLIAVLARRTKNNPVLIGEPGVGKTA 226
Query: 79 IAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIIL 138
+AEGLAQ I + +VPD ++G ++ LD+G ++AGTKYRGEFEERLK+++EE++ +I+
Sbjct: 227 VAEGLAQLILNENVPDFLDGSLIMALDLGSILAGTKYRGEFEERLKRIVEEVQNDSAVII 286
Query: 139 FIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQP 198
IDE+HTL+GAGAAEGA+DAANILKP+LARG+ +CIGATT DEYRK+IE+DPALERRFQP
Sbjct: 287 VIDEIHTLVGAGAAEGAVDAANILKPALARGKFRCIGATTKDEYRKYIERDPALERRFQP 346
Query: 199 VKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLID 258
V V EPSV TI+IL+GL+ ++E HH L Y +A+ AA LS +YI DRFLPDKAID++D
Sbjct: 347 VLVEEPSVGTTIEILQGLKPKFEQHHTLTYDRKAIEQAAILSDKYIPDRFLPDKAIDVLD 406
Query: 259 EAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQI--- 315
E+G+RVRL + +LPE R L EL+ + KEK +++ +F A DREM+L+ I
Sbjct: 407 ESGARVRLENRRLPEGLRNLMNELQTVIKEKENSMKTHNFSLAQNQFDREMELRTHIRIM 466
Query: 316 --SALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEET 373
SAL D+ + ++ E + V E D+ ++VS WTG+PV K++ ES+RLL+ME+
Sbjct: 467 KQSALADEMRGFNRKEIDK------VLENDVANVVSNWTGVPVNKITGSESERLLQMEQI 520
Query: 374 LHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGS 433
+ +R+IGQ +AV ++S AIRRARVGL+NPNRPIASFIF+GPTGVGK+EL KA+A Y FG
Sbjct: 521 IRERIIGQQQAVISVSNAIRRARVGLRNPNRPIASFIFAGPTGVGKTELTKAVAEYMFGD 580
Query: 434 EEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPD 493
E +MIRLDMSE+ME+HTV+KLIGSPPGYVGY EGGQLTEAVR +PY+VVL DE+EKAHPD
Sbjct: 581 ENSMIRLDMSEYMEKHTVAKLIGSPPGYVGYNEGGQLTEAVRTKPYSVVLLDEVEKAHPD 640
Query: 494 VFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGG--------RRIGFDL- 544
VFN++LQIL+DGRLTDSKGR +DF NT+++MT+N+GS +IE+ + G L
Sbjct: 641 VFNLLLQILDDGRLTDSKGRVIDFTNTMIVMTTNLGSKIIERESGVKSKDDVKASGLKLM 700
Query: 545 -------DYD-----EKDSSYNR-IKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVK 591
D++ EKD+ R + LV EELK +FRPEFLNR+DE+IVF L+K ++
Sbjct: 701 INDNPFGDWEPETELEKDAEIVRKVNKLVKEELKNFFRPEFLNRIDEIIVFNHLSKHDIW 760
Query: 592 EIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEK 651
+I+ IM+K++ DRLK K I L VTE R +VEEG++P YGARPLRR IM LED +AE+
Sbjct: 761 DISAIMIKQLIDRLKDKGINLVVTEPVRALLVEEGHDPIYGARPLRRVIMSYLEDQLAER 820
Query: 652 MLAREIKEGDSVIV 665
L+ ++K G S+IV
Sbjct: 821 CLSEDLKPGTSIIV 834
>gi|380302202|ref|ZP_09851895.1| ATPase with chaperone activity, ATP-binding subunit
[Brachybacterium squillarum M-6-3]
Length = 863
Score = 786 bits (2031), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/687 (57%), Positives = 526/687 (76%), Gaps = 20/687 (2%)
Query: 11 AGVGGGSSGNKMPTL--EEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCL 68
A GG + G +L +++G NLT+ A +G LDPV+GR+ + ERV+Q+L RRTKNNP L
Sbjct: 151 ATAGGPAEGQPSGSLVLDQFGRNLTQAARDGNLDPVIGREHEAERVMQVLSRRTKNNPVL 210
Query: 69 IGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLME 128
IGEPGVGK+A+ EGLAQ I +GDVP+T++ K++ TLD+G LVAG++YRG+FEERLKK+++
Sbjct: 211 IGEPGVGKSAVVEGLAQSIVAGDVPETLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLK 270
Query: 129 EIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEK 188
EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTL+EYRKHIEK
Sbjct: 271 EIRTRGDIILFIDEIHTLVGAGAAEGAIDAASILKPMLARGELQTIGATTLEEYRKHIEK 330
Query: 189 DPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRF 248
D ALERRFQP++V EPS+ T++ILKGLR+RYE HHK+ TD ALVSAA L+ +YI+DRF
Sbjct: 331 DAALERRFQPIQVDEPSIVHTVEILKGLRDRYEAHHKVTITDAALVSAANLADRYINDRF 390
Query: 249 LPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDRE 308
LPDKAIDLIDEAG+R+R+R P E +E + + K+K EA+ GQDFE A LRD E
Sbjct: 391 LPDKAIDLIDEAGARLRIRRLTAPPELKEFDTRIEDTRKQKEEAIDGQDFELAASLRDTE 450
Query: 309 MDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLL 368
LK + +K K ++ DV V+E I +++A TGIP+ K++ +ES RLL
Sbjct: 451 QQLKTERD---EKEKAWRHGDS---DVVSTVSEEVIAEVLAAATGIPIVKLTEEESSRLL 504
Query: 369 KMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAA 428
ME+ LHKRVIGQDEA+KA+S+AIRR R GLK+P RP SFIF+GPTGVGK+ELAKALA
Sbjct: 505 HMEDELHKRVIGQDEAIKALSQAIRRTRAGLKDPKRPGGSFIFAGPTGVGKTELAKALAE 564
Query: 429 YYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIE 488
+ FG E+++I+LDMSEF E+HT S+L GSPPGYVGY EGGQLTE VRR+P++VVLFDE+E
Sbjct: 565 FLFGDEDSLIQLDMSEFGEKHTASRLFGSPPGYVGYDEGGQLTEKVRRKPFSVVLFDEVE 624
Query: 489 KAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKG---GRRIGFDLD 545
KAH D+FN +LQILEDGRLTDS+GRTVDFKNT++IMT+N+G+ I KG G + G DL
Sbjct: 625 KAHVDIFNSLLQILEDGRLTDSQGRTVDFKNTVIIMTTNLGTRDIAKGVSMGFQAGGDLA 684
Query: 546 YDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRL 605
D Y R+K+ V EELKQ+F+PEFLNR+D+++VF QL++ E+ +I D+M+ ++ RL
Sbjct: 685 TD-----YERMKAKVNEELKQHFKPEFLNRVDDIVVFPQLSQSEIIQIVDLMVAKLETRL 739
Query: 606 KTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIV 665
KD+ + +T+ + + E+GY+P GARPLRR I R +ED+++EK+L +++ GD ++V
Sbjct: 740 SEKDMAITLTDGAKALLAEKGYDPVLGARPLRRTIQRDIEDTLSEKILFGQVRVGDEIVV 799
Query: 666 DVDSDGNVTVLN----GSSGAPESLAD 688
+ +G + L G +G E+++D
Sbjct: 800 GAEGEGLLGELTFARRGENGELEAISD 826
>gi|355676751|ref|ZP_09060247.1| hypothetical protein HMPREF9469_03284 [Clostridium citroniae
WAL-17108]
gi|354813340|gb|EHE97951.1| hypothetical protein HMPREF9469_03284 [Clostridium citroniae
WAL-17108]
Length = 850
Score = 786 bits (2031), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/687 (57%), Positives = 525/687 (76%), Gaps = 13/687 (1%)
Query: 2 VGESTEAVG---AGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQIL 58
+GE AV +G GG N PTL+ Y NLT+LA +G+LDPV+GR+ +I+RV+QIL
Sbjct: 143 MGEDAPAVKDDISGAKGGRKSNATPTLDSYSRNLTQLAADGRLDPVIGREQEIQRVIQIL 202
Query: 59 GRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGE 118
RRTKNNPCLIGEPGVGKTA+ EGLAQ I SG+VP+TI K+V+TLD+ +VAG+KYRGE
Sbjct: 203 SRRTKNNPCLIGEPGVGKTAVVEGLAQMIVSGNVPETIADKRVMTLDLSGMVAGSKYRGE 262
Query: 119 FEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATT 178
FEER+KK++ E+ S +++LFIDE+HT+IGAG AEGA+DA+NILKPSLARGELQ IGATT
Sbjct: 263 FEERIKKVISEVIDSGDVLLFIDEIHTIIGAGGAEGALDASNILKPSLARGELQLIGATT 322
Query: 179 LDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQ 238
++EYRK+IEKD ALERRFQPV V EP+ DE++ IL+GLR RYE HHK+ TDEAL +A +
Sbjct: 323 INEYRKYIEKDSALERRFQPVTVDEPTEDESVAILRGLRSRYEEHHKVEITDEALAAAVK 382
Query: 239 LSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDF 298
LS +YI+DRFLPDKAIDLIDEA SRVRL + P + +E E+E+ + + K EA++ + +
Sbjct: 383 LSSRYINDRFLPDKAIDLIDEASSRVRLANYTKPSKIKEYEEEIEALEESKEEAIKKEAY 442
Query: 299 EKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEK 358
EKAGE++ ++ L+ +I+ + M K + E +V++ +I +VS WT IPV K
Sbjct: 443 EKAGEIKSKQEKLREKIN------QTMEKWQKEKETKKLLVSDNEIADVVSGWTRIPVRK 496
Query: 359 VSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVG 418
++ +ES+RL +E LH+RV+GQ+EAV AIS+AIRR RVGLK+P RPI SF+F GPTGVG
Sbjct: 497 LAEEESERLKNLEGILHQRVVGQEEAVTAISKAIRRGRVGLKDPGRPIGSFLFLGPTGVG 556
Query: 419 KSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRP 478
K+EL+KAL+ FG+E A+IR+DMSE+ME+H+VSK+IGSPPGYVGY EGGQL+E VRR P
Sbjct: 557 KTELSKALSEAMFGTENALIRVDMSEYMEKHSVSKMIGSPPGYVGYDEGGQLSEKVRRNP 616
Query: 479 YTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR 538
Y+V+LFDEIEKAHPDVFN++LQ+L+DG +TD++GR +DFKNT++IMTSN G+ I +
Sbjct: 617 YSVILFDEIEKAHPDVFNILLQVLDDGHITDAQGRKIDFKNTIIIMTSNAGAENI-ISPK 675
Query: 539 RIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIML 598
R+GF D K + Y +K V +E+K+ F+PEFLNR+DE+IVF QL+K +K IADIML
Sbjct: 676 RLGFGAASDAK-ADYTFMKERVMDEVKRLFKPEFLNRIDEIIVFHQLSKDHIKGIADIML 734
Query: 599 KEVFDRLKTK-DIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREI 657
+ R K + IEL VT+ RE ++++GY+ YGARPLRR I L+ED MAE+ML I
Sbjct: 735 STIGKRSKDQLGIELTVTDEAREYLIDKGYDEKYGARPLRRTIQNLVEDKMAEEMLDGSI 794
Query: 658 KEGDSVIVDVDSDGNVTVLNGSSGAPE 684
K GD+V V D + +T + S AP+
Sbjct: 795 KAGDTVQVGFDGE-KLTFTSKSKAAPK 820
>gi|269955171|ref|YP_003324960.1| ATPase AAA-2 domain-containing protein [Xylanimonas cellulosilytica
DSM 15894]
gi|269303852|gb|ACZ29402.1| ATPase AAA-2 domain protein [Xylanimonas cellulosilytica DSM 15894]
Length = 852
Score = 786 bits (2031), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/674 (58%), Positives = 525/674 (77%), Gaps = 20/674 (2%)
Query: 3 GESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRT 62
G+ A G G SG+ + L+++G NLT+ A EGKLDPV+GR +IERV+Q+L RRT
Sbjct: 147 GKEPVAAGGPAEGQPSGSAV--LDQFGRNLTQAAREGKLDPVIGRSKEIERVMQVLSRRT 204
Query: 63 KNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEER 122
KNNP LIGEPGVGKTA+ EGLAQ I GDVP+T++ K++ TLD+G LVAG++YRG+FEER
Sbjct: 205 KNNPVLIGEPGVGKTAVVEGLAQDIVRGDVPETLKDKQLYTLDLGALVAGSRYRGDFEER 264
Query: 123 LKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEY 182
LKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEY
Sbjct: 265 LKKVLKEIRTRGDIILFIDEIHTLVGAGAAEGAIDAASILKPMLARGELQTIGATTLDEY 324
Query: 183 RKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQ 242
RK++EKDPALERRFQP++V EPS+ I+ILKGLR+RYE HH++ TD ALV+AA L+ +
Sbjct: 325 RKYVEKDPALERRFQPIQVAEPSLQHAIEILKGLRDRYEAHHRVSITDSALVTAATLADR 384
Query: 243 YISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAG 302
YI+DRFLPDKAIDLIDEAG+R+R+R P E + L++E+ + +EK A+ QDFEKA
Sbjct: 385 YINDRFLPDKAIDLIDEAGARLRIRRMTAPPELKVLDEEISEARREKESAIDEQDFEKAA 444
Query: 303 ELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVT--EVDIQHIVSAWTGIPVEKVS 360
LRD+E L A K E +A ++GD+ V T E + +++ TGIPV K++
Sbjct: 445 GLRDKEKQLTA-------KRAERERA-WKSGDLDTVATVDEELVAEVLAMSTGIPVVKLT 496
Query: 361 TDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 420
+ES RLL+MEE LHKRV+GQ+ A+KA+S+AIRR R GLK+P RP SFIF+GPTGVGK+
Sbjct: 497 EEESGRLLRMEEELHKRVVGQEAAIKALSQAIRRTRAGLKDPKRPGGSFIFAGPTGVGKT 556
Query: 421 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 480
ELAKALA + FG E+A+I+LDMSEF E+HTVS+L GSPPGYVGY EGGQLTE VRR+P++
Sbjct: 557 ELAKALAEFLFGDEDALIQLDMSEFSEKHTVSRLFGSPPGYVGYDEGGQLTEKVRRKPFS 616
Query: 481 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKG---G 537
VVLFDE+EKAH D+FN +LQ+LEDGRLTDS+GR VDFKNT++IMT+N+G+ I KG G
Sbjct: 617 VVLFDEVEKAHADIFNSLLQVLEDGRLTDSQGRVVDFKNTVIIMTTNLGTRDIAKGVQTG 676
Query: 538 RRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIM 597
+ G DL +SY R+K+ V EELKQ+FRPEFLNR+D+++VF QLT+ E+ EI D+
Sbjct: 677 FQAGGDL-----VTSYERMKAKVNEELKQHFRPEFLNRVDDVVVFPQLTQKEIVEIVDLE 731
Query: 598 LKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREI 657
+ ++ RL+ KD+ +++T+ + + E+GY+P GARPL+RAI R +ED+++EK+L ++
Sbjct: 732 IAKLDKRLRDKDMAIELTDAAKNLLAEKGYDPVLGARPLKRAIQREIEDTLSEKILFGDL 791
Query: 658 KEGDSVIVDVDSDG 671
K G ++VD + +G
Sbjct: 792 KPGQIIVVDGEGEG 805
>gi|1314297|gb|AAC44446.1| ClpC ATPase [Listeria monocytogenes]
Length = 825
Score = 786 bits (2030), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/666 (57%), Positives = 516/666 (77%), Gaps = 5/666 (0%)
Query: 10 GAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLI 69
G G ++ PTL+ +LT +A E LDPV+GR +I+RV+++L RRTKNNP LI
Sbjct: 147 ATGAGRQTNTQATPTLDSLARDLTVIAREDNLDPVIGRSKEIQRVIEVLSRRTKNNPVLI 206
Query: 70 GEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEE 129
GEPGVGKTAIAEGLAQ+I +VP+T+ GK+V+TLDMG +VAGTKYRGEFE+RLKK+M+E
Sbjct: 207 GEPGVGKTAIAEGLAQQIVRNEVPETLRGKRVMTLDMGTVVAGTKYRGEFEDRLKKVMDE 266
Query: 130 IKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKD 189
I+Q+ +ILFIDE+HTLIGAG AEGAIDA+NILKP LARGELQCIGATTLDEYRK+IEKD
Sbjct: 267 IRQAGNVILFIDELHTLIGAGGAEGAIDASNILKPPLARGELQCIGATTLDEYRKYIEKD 326
Query: 190 PALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFL 249
ALERRFQP+KV EP+V+E+IQIL GLR+RYE HH++ TDEAL +A +LS +YISDRFL
Sbjct: 327 RALERRFQPIKVDEPTVEESIQILHGLRDRYEAHHRVAITDEALEAAVRLSDRYISDRFL 386
Query: 250 PDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREM 309
PDKAID+IDE+GS+VRL+ P+ +E+E L + KEK+ AV+GQ+FEKA LRD+E
Sbjct: 387 PDKAIDVIDESGSKVRLKSFTTPKNVKEMENNLSDLKKEKDAAVQGQEFEKAASLRDKEQ 446
Query: 310 DLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLK 369
LK + + + + E + D V ++ + +V++WTGIPV K++ E+++LL
Sbjct: 447 KLKKSLDKKSLEETKANWQEKQGLDHSEVTEDI-VAEVVASWTGIPVAKLAETETNKLLN 505
Query: 370 MEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAY 429
ME+ LH+RVIGQD AVKA+S A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+ALA
Sbjct: 506 MEKLLHERVIGQDAAVKAVSLAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAES 565
Query: 430 YFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEK 489
FG E++MIR+DMSE+ME+ + ++L+G+PPGYVGY EGGQLTE VR++PY+VVL DEIEK
Sbjct: 566 MFGDEDSMIRIDMSEYMEKFSTARLVGAPPGYVGYEEGGQLTEKVRQKPYSVVLLDEIEK 625
Query: 490 AHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEK 549
AHPDVFNM+LQ+L+DGRLTDSKGR VDF+NT++IMTSN+G+ + K + +GF++ K
Sbjct: 626 AHPDVFNMLLQVLDDGRLTDSKGRVVDFRNTVIIMTSNIGAQEM-KQDKSMGFNVTDPLK 684
Query: 550 DSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKD 609
D + ++ V ++LKQ FRPEF+NR+DE IVF L + E+K+I ++ ++ RL +D
Sbjct: 685 D--HKAMEHRVLQDLKQAFRPEFINRIDETIVFHSLQEKELKQIVTLLTAQLTKRLAERD 742
Query: 610 IELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDS 669
I +++TE + ++ ++GY+P YGARPL+RAI + +ED ++E++L IK GD V + V
Sbjct: 743 IHVKLTEGAKSKIAKDGYDPEYGARPLKRAIQKEVEDMLSEELLRGNIKVGDYVEIGV-K 801
Query: 670 DGNVTV 675
DG + V
Sbjct: 802 DGKLEV 807
>gi|357412696|ref|YP_004924432.1| ATPase AAA [Streptomyces flavogriseus ATCC 33331]
gi|320010065|gb|ADW04915.1| ATPase AAA-2 domain protein [Streptomyces flavogriseus ATCC 33331]
Length = 841
Score = 786 bits (2029), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/687 (57%), Positives = 524/687 (76%), Gaps = 16/687 (2%)
Query: 11 AGVGGGSSGNKMPTL--EEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCL 68
A GG + G +L +++G NLT+ A E KLDPV+GR+ +IERV+Q+L RRTKNNP L
Sbjct: 152 ATAGGPAEGTPSTSLVLDQFGRNLTQAARESKLDPVIGREKEIERVMQVLSRRTKNNPVL 211
Query: 69 IGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLME 128
IGEPGVGKTA+ EGLAQ I G+VP+T++ K + TLD+G LVAG++YRG+FEERLKK+++
Sbjct: 212 IGEPGVGKTAVVEGLAQAIVKGEVPETLKDKHLYTLDLGALVAGSRYRGDFEERLKKVLK 271
Query: 129 EIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEK 188
EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEYRKH+EK
Sbjct: 272 EIRTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIGATTLDEYRKHLEK 331
Query: 189 DPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRF 248
D ALERRFQP++V EPS+ TI+ILKGLR+RYE HH++ TDEALV AA L+ +YISDRF
Sbjct: 332 DAALERRFQPIQVAEPSLPHTIEILKGLRDRYEAHHRVSITDEALVQAATLADRYISDRF 391
Query: 249 LPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDRE 308
LPDKAIDLIDEAGSR+R+R P + RE ++++ + ++K A+ QDFEKA LRD+E
Sbjct: 392 LPDKAIDLIDEAGSRMRIRRMTAPPDLREFDEKIAGVRRDKESAIDSQDFEKAASLRDKE 451
Query: 309 MDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKVSTDESD 365
L A K + E +AGD+ VV EVD I +++ TGIPV K++ +ES
Sbjct: 452 KQLLA--------AKAKREKEWKAGDM-DVVAEVDGELIAEVLATATGIPVFKLTEEESS 502
Query: 366 RLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKA 425
RLL+ME+ LHKRVIGQ +A+KA+S+AIRR R GLK+P RP SFIF+GP+GVGK+EL+K
Sbjct: 503 RLLRMEDELHKRVIGQKDAIKALSQAIRRTRAGLKDPKRPGGSFIFAGPSGVGKTELSKT 562
Query: 426 LAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFD 485
LA + FG E+A+I LDMSEF E+HTVS+L GSPPGYVGY EGGQLTE VRR+P++VVLFD
Sbjct: 563 LAEFLFGDEDALISLDMSEFSEKHTVSRLFGSPPGYVGYEEGGQLTEKVRRKPFSVVLFD 622
Query: 486 EIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLD 545
E+EKAHPD+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N+G+ I K G +GF
Sbjct: 623 EVEKAHPDIFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNLGTRDISK-GFNLGFAAQ 681
Query: 546 YDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRL 605
D K ++Y R+K V EELKQ+FRPEFLNR+D+ +VF QLT+ ++ +I D+M+ +V +RL
Sbjct: 682 GDVK-TNYERMKVKVNEELKQHFRPEFLNRVDDTVVFHQLTEEDIIQIVDLMVAKVDERL 740
Query: 606 KTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIV 665
K +D+ ++++ + + ++GY+P GARPLRR I R +ED ++EK+L E++ G V+V
Sbjct: 741 KDRDMGIELSAEAKSLLAKKGYDPVMGARPLRRTIQREIEDILSEKILFGELRPGHIVVV 800
Query: 666 DVDSDGNVTVLNGSSGAPESLADPLPV 692
+ +G+ + +L D P+
Sbjct: 801 GTEGEGDEKKFSFRGEEKSALPDVPPI 827
>gi|440785432|ref|ZP_20962189.1| ATPase with chaperone activity clpC, two ATP-binding domain protein
[Clostridium pasteurianum DSM 525]
gi|440218328|gb|ELP57550.1| ATPase with chaperone activity clpC, two ATP-binding domain protein
[Clostridium pasteurianum DSM 525]
Length = 812
Score = 786 bits (2029), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/648 (59%), Positives = 517/648 (79%), Gaps = 7/648 (1%)
Query: 23 PTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEG 82
P L ++G +LT +A EGKLDPV+GR + +RV++IL RRTKNNPCLIG+PGVGKTAIAEG
Sbjct: 165 PALNQFGRDLTLMAAEGKLDPVIGRDGETQRVLEILCRRTKNNPCLIGDPGVGKTAIAEG 224
Query: 83 LAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDE 142
LAQRI SG++P+ ++ K+VITLD+ +VAG+KYRGEFEERLK++M EI+ S +ILFIDE
Sbjct: 225 LAQRIVSGNIPEILKDKRVITLDISSMVAGSKYRGEFEERLKRVMTEIRNSGNVILFIDE 284
Query: 143 VHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVP 202
+HT+IGAG AEGAIDA+NILKPSLARGE+QCIGATT+DEYRK+IEKD ALERRFQPV V
Sbjct: 285 IHTIIGAGGAEGAIDASNILKPSLARGEIQCIGATTIDEYRKYIEKDSALERRFQPVTVG 344
Query: 203 EPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGS 262
EPS +E + ILKGLR++YE HH+++ TD+AL +A LS +YI+DR+LPDKAIDLIDEAG+
Sbjct: 345 EPSKEEAVLILKGLRDKYEAHHRVKITDDALEAAVNLSDRYITDRYLPDKAIDLIDEAGA 404
Query: 263 RVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKG 322
+VR+ + P + + E+EL + KEK +A+R QDFEKA LRD+E +LK +I
Sbjct: 405 KVRIENLTAPPDLKNQEEELEKTEKEKADAIRLQDFEKAARLRDKEKELKEKIEDFKKNW 464
Query: 323 KEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQD 382
K + +V E I +V+ W IPVEK++ ES++LLK+EE LHKRVIGQ+
Sbjct: 465 KNRKDVKNH------IVAEAQIAAVVAKWANIPVEKLTEKESEKLLKLEEILHKRVIGQN 518
Query: 383 EAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDM 442
EAVK++SRA+RRARVGLK+P RPI SFIF GPTGVGK+EL+KALA FG E ++IR+DM
Sbjct: 519 EAVKSVSRAVRRARVGLKDPKRPIGSFIFLGPTGVGKTELSKALAEAMFGDENSIIRIDM 578
Query: 443 SEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQIL 502
SE+ME+HTVS+LIGSPPGYVG+ +GGQLTE VRR+PY+VVLFDEIEKAHPDVFN++LQIL
Sbjct: 579 SEYMEKHTVSRLIGSPPGYVGFDDGGQLTEKVRRKPYSVVLFDEIEKAHPDVFNILLQIL 638
Query: 503 EDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTE 562
EDGRLTD KG+TV+F+NT++I+TSNVG+S I+K + +GF ++ +E + Y ++K V E
Sbjct: 639 EDGRLTDGKGKTVNFRNTIIILTSNVGASTIKK-QKSLGFAVNNNEVEDEYEKMKENVME 697
Query: 563 ELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERV 622
ELK+ FRPEFLNR+D++IVF QL + +++E+ +ML+ V RL +DI ++ TE + +
Sbjct: 698 ELKRSFRPEFLNRIDDIIVFHQLLEEDLQEVVKLMLQSVSVRLSDQDINIKFTEEAEKLL 757
Query: 623 VEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSD 670
++G++P+YGARPLRR I +++ED ++E++L + +GDSV V V+ +
Sbjct: 758 AKKGFDPTYGARPLRRTITKIVEDKISEEILNGSLSKGDSVSVTVNDN 805
>gi|345000382|ref|YP_004803236.1| ATPase AAA-2 domain-containing protein [Streptomyces sp. SirexAA-E]
gi|344316008|gb|AEN10696.1| ATPase AAA-2 domain protein [Streptomyces sp. SirexAA-E]
Length = 842
Score = 786 bits (2029), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/677 (58%), Positives = 521/677 (76%), Gaps = 16/677 (2%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTL--EEYGTNLTKLAEEGKLDPVVGRQPQIERVVQIL 58
+ G S A GG + G +L +++G NLT+ A E KLDPV+GR+ +IERV+Q+L
Sbjct: 142 LSGYSGGKEAATAGGPAEGTPSTSLVLDQFGRNLTQAARESKLDPVIGREKEIERVMQVL 201
Query: 59 GRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGE 118
RRTKNNP LIGEPGVGKTA+ EGLAQ I G+VP+T++ K + TLD+G LVAG++YRG+
Sbjct: 202 SRRTKNNPVLIGEPGVGKTAVVEGLAQAIVKGEVPETLKDKHLYTLDLGALVAGSRYRGD 261
Query: 119 FEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATT 178
FEERLKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATT
Sbjct: 262 FEERLKKVLKEIRTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIGATT 321
Query: 179 LDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQ 238
LDEYRKH+EKD ALERRFQP++V EPS+ TI+ILKGLR+RYE HH++ TDEALV AA
Sbjct: 322 LDEYRKHLEKDAALERRFQPIQVAEPSLPHTIEILKGLRDRYEAHHRVSITDEALVQAAT 381
Query: 239 LSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDF 298
L+ +YISDRFLPDKAIDLIDEAGSR+R+R P + RE ++++ + ++K A+ QDF
Sbjct: 382 LADRYISDRFLPDKAIDLIDEAGSRMRIRRMTAPPDLREFDEKIAGVRRDKESAIDSQDF 441
Query: 299 EKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIP 355
EKA LRD+E L A K + E +AGD+ VV EVD I +++ TGIP
Sbjct: 442 EKAASLRDKEKQLLA--------AKAKREKEWKAGDM-DVVAEVDGELIAEVLATATGIP 492
Query: 356 VEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPT 415
V K++ +ES RLL+ME+ LHKRVIGQ +A+KA+S+AIRR R GLK+P RP SFIF+GP+
Sbjct: 493 VFKLTEEESSRLLRMEDELHKRVIGQKDAIKALSQAIRRTRAGLKDPKRPGGSFIFAGPS 552
Query: 416 GVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVR 475
GVGK+EL+K LA + FG E+A+I LDMSEF E+HTVS+L GSPPGYVGY EGGQLTE VR
Sbjct: 553 GVGKTELSKTLAEFLFGDEDALISLDMSEFSEKHTVSRLFGSPPGYVGYEEGGQLTEKVR 612
Query: 476 RRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEK 535
R+P++VVLFDE+EKAHPD+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N+G+ I K
Sbjct: 613 RKPFSVVLFDEVEKAHPDIFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNLGTRDISK 672
Query: 536 GGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIAD 595
G +GF D K ++Y R+K V EELKQ+FRPEFLNR+D+ +VF QLT+ ++ +I D
Sbjct: 673 -GFNLGFAAQGDVK-TNYERMKVKVNEELKQHFRPEFLNRVDDTVVFHQLTEEDIIQIVD 730
Query: 596 IMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAR 655
+M+ +V +RLK +D+ ++++ + + ++GY+P GARPLRR I R +ED ++EK+L
Sbjct: 731 LMVAKVDERLKDRDMGIELSAEAKSLLAKKGYDPVMGARPLRRTIQREIEDILSEKILFG 790
Query: 656 EIKEGDSVIVDVDSDGN 672
E++ G V+V + +G+
Sbjct: 791 ELRPGHIVVVGTEGEGD 807
>gi|29829142|ref|NP_823776.1| ATP-dependent Clp protease [Streptomyces avermitilis MA-4680]
gi|29606248|dbj|BAC70311.1| putative ATP-dependent Clp protease [Streptomyces avermitilis
MA-4680]
Length = 842
Score = 786 bits (2029), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/684 (57%), Positives = 524/684 (76%), Gaps = 16/684 (2%)
Query: 14 GGGSSGNKMPTL--EEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGE 71
GG + G +L +++G NLT+ A E KLDPV+GR+ +IERV+Q+L RRTKNNP LIGE
Sbjct: 155 GGPAEGTPSTSLVLDQFGRNLTQAARESKLDPVIGREKEIERVMQVLSRRTKNNPVLIGE 214
Query: 72 PGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIK 131
PGVGKTA+ EGLAQ I G+VP+T++ K + TLD+G LVAG++YRG+FEERLKK+++EI+
Sbjct: 215 PGVGKTAVVEGLAQAIVKGEVPETLKDKHLYTLDLGALVAGSRYRGDFEERLKKVLKEIR 274
Query: 132 QSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPA 191
+IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEY+K++EKD A
Sbjct: 275 TRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIGATTLDEYKKYLEKDAA 334
Query: 192 LERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPD 251
LERRFQP++V EPS+ TI+ILKGLR+RYE HH++ TDEALV AA L+ +Y+SDRFLPD
Sbjct: 335 LERRFQPIQVAEPSLPHTIEILKGLRDRYEAHHRVSITDEALVQAATLADRYVSDRFLPD 394
Query: 252 KAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDL 311
KAIDLIDEAGSR+R+R P + RE ++++ + +K A+ QDFEKA LRD+E L
Sbjct: 395 KAIDLIDEAGSRMRIRRMTAPPDLREFDEKIAGVRHDKESAIDSQDFEKAASLRDKEKQL 454
Query: 312 KAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKVSTDESDRLL 368
A K + E + GD+ VV EVD I +++A TGIPV K++ +ES RLL
Sbjct: 455 LA--------AKAKREKEWKTGDM-DVVAEVDGELIAEVLAASTGIPVFKLTEEESSRLL 505
Query: 369 KMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAA 428
+ME+ LHKRVIGQ +AVKA+S+AIRR R GLK+P RP SFIF+GP+GVGK+EL++ALA
Sbjct: 506 RMEDELHKRVIGQKDAVKALSKAIRRTRAGLKDPKRPGGSFIFAGPSGVGKTELSRALAE 565
Query: 429 YYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIE 488
+ FG E+A+I LDMSEF E+HTVS+L GSPPGYVGY EGGQLTE VRR+P++VVLFDE+E
Sbjct: 566 FLFGDEDALISLDMSEFSEKHTVSRLFGSPPGYVGYEEGGQLTEKVRRKPFSVVLFDEVE 625
Query: 489 KAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDE 548
KAH D+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N+G+ I K G +GF D
Sbjct: 626 KAHADIFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNLGTRDISK-GFNLGFAAQGDS 684
Query: 549 KDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTK 608
K S+Y R+K+ V +ELK++FRPEFLNR+D+++VF QLT+ ++ I D+M+ +V +RLK +
Sbjct: 685 K-STYERMKNKVADELKRHFRPEFLNRVDDVVVFPQLTRDDILAIVDLMITKVDERLKDR 743
Query: 609 DIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVD 668
D+ +++ + +E + ++GY+P GARPLRR I R +ED+++EK+L E++ G V+VD +
Sbjct: 744 DMGIELAQSAKELLAQKGYDPMLGARPLRRTIQREIEDTLSEKILFGELRPGHIVVVDTE 803
Query: 669 SDGNVTVLNGSSGAPESLADPLPV 692
+G +L D P+
Sbjct: 804 GEGETKTFTFRGEEKSALPDVPPI 827
>gi|119961353|ref|YP_945989.1| ATP-dependent Clp protease, ATP-binding subunit [Arthrobacter
aurescens TC1]
gi|119948212|gb|ABM07123.1| putative ATP-dependent Clp protease, ATP-binding subunit
[Arthrobacter aurescens TC1]
Length = 830
Score = 785 bits (2028), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/676 (59%), Positives = 519/676 (76%), Gaps = 19/676 (2%)
Query: 3 GESTEAVGAGVG---GGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 59
G+ T G+G G G +G+ + L+++G NLT+ A E KLDPV+GR+ ++ERV+Q+L
Sbjct: 147 GKETAGSGSGQGQPEGTPAGSVV--LDQFGRNLTQAARENKLDPVIGREQEMERVMQVLS 204
Query: 60 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 119
RRTKNNP LIGEPGVGKTA+ EGLAQ I GDVP+TI+ K++ TLD+G LVAG++YRG+F
Sbjct: 205 RRTKNNPVLIGEPGVGKTAVVEGLAQAIVRGDVPETIKDKQLYTLDLGSLVAGSRYRGDF 264
Query: 120 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 179
EERLKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTL
Sbjct: 265 EERLKKVLKEIRTRGDIILFIDEIHTLVGAGAAEGAIDAASILKPMLARGELQTIGATTL 324
Query: 180 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 239
DEYRKHIEKD ALERRFQP++V EPSV I+ILKGLR+RYE HH++ TD AL SAAQL
Sbjct: 325 DEYRKHIEKDAALERRFQPIQVKEPSVAHAIEILKGLRDRYEAHHRVTITDGALASAAQL 384
Query: 240 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 299
+ +YISDRFLPDKAIDLIDEAG+R+R+R P E + +++ + + EK A+ QDFE
Sbjct: 385 AERYISDRFLPDKAIDLIDEAGARLRIRRMTAPPELKAMDERIADVKMEKESAIDAQDFE 444
Query: 300 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPV 356
A LRD+E L A+ + KE + D ++EVD I +++ TGIPV
Sbjct: 445 GAASLRDKEQKLIAERAE-----KERNWKSGGMDD----ISEVDEDLIAEVLANSTGIPV 495
Query: 357 EKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTG 416
K++ +ES RLLKME+ LHKRV+GQ+EA+KA+S+AIRR R GLK+P RP SFIF+GPTG
Sbjct: 496 FKLTEEESSRLLKMEDELHKRVVGQNEAIKALSQAIRRTRAGLKDPKRPGGSFIFAGPTG 555
Query: 417 VGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRR 476
VGK+ELAKALA + FG E+A+I LDMSE+ E+HTVS+L G+PPGYVGY EGGQLTE VRR
Sbjct: 556 VGKTELAKALAEFLFGEEDALITLDMSEYSEKHTVSRLFGAPPGYVGYEEGGQLTEKVRR 615
Query: 477 RPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKG 536
RP++VVLFDE+EKAH D+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N+G+ I K
Sbjct: 616 RPFSVVLFDEVEKAHADLFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNLGTRDISK- 674
Query: 537 GRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADI 596
GF D + + YNR+++ VTEELKQ+FRPEFLNR+D+++VF QLT+ E+ EI D+
Sbjct: 675 SVATGFQSGTDTQ-TGYNRMRARVTEELKQHFRPEFLNRVDDVVVFPQLTQDEIIEIVDL 733
Query: 597 MLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLARE 656
+ + RLK KD+ +++T + + GY+P+ GARPLRR I R +ED ++EK+L E
Sbjct: 734 FVTRLERRLKDKDMGIELTPAAKVLLATRGYDPAMGARPLRRTIQREIEDQLSEKILFGE 793
Query: 657 IKEGDSVIVDVDSDGN 672
+ GD V+VDVD +G+
Sbjct: 794 LHSGDIVVVDVDGEGD 809
>gi|403525254|ref|YP_006660141.1| ATP-dependent Clp protease ATP-binding subunit [Arthrobacter sp.
Rue61a]
gi|403227681|gb|AFR27103.1| putative ATP-dependent Clp protease ATP-binding subunit
[Arthrobacter sp. Rue61a]
Length = 809
Score = 785 bits (2028), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/676 (59%), Positives = 519/676 (76%), Gaps = 19/676 (2%)
Query: 3 GESTEAVGAGVG---GGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 59
G+ T G+G G G +G+ + L+++G NLT+ A E KLDPV+GR+ ++ERV+Q+L
Sbjct: 126 GKETAGSGSGQGQPEGTPAGSVV--LDQFGRNLTQAARENKLDPVIGREQEMERVMQVLS 183
Query: 60 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 119
RRTKNNP LIGEPGVGKTA+ EGLAQ I GDVP+TI+ K++ TLD+G LVAG++YRG+F
Sbjct: 184 RRTKNNPVLIGEPGVGKTAVVEGLAQAIVRGDVPETIKDKQLYTLDLGSLVAGSRYRGDF 243
Query: 120 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 179
EERLKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTL
Sbjct: 244 EERLKKVLKEIRTRGDIILFIDEIHTLVGAGAAEGAIDAASILKPMLARGELQTIGATTL 303
Query: 180 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 239
DEYRKHIEKD ALERRFQP++V EPSV I+ILKGLR+RYE HH++ TD AL SAAQL
Sbjct: 304 DEYRKHIEKDAALERRFQPIQVKEPSVAHAIEILKGLRDRYEAHHRVTITDGALASAAQL 363
Query: 240 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 299
+ +YISDRFLPDKAIDLIDEAG+R+R+R P E + +++ + + EK A+ QDFE
Sbjct: 364 AERYISDRFLPDKAIDLIDEAGARLRIRRMTAPPELKAMDERIADVKMEKESAIDAQDFE 423
Query: 300 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPV 356
A LRD+E L A+ + KE + D ++EVD I +++ TGIPV
Sbjct: 424 GAASLRDKEQKLIAERAE-----KERNWKSGGMDD----ISEVDEDLIAEVLANSTGIPV 474
Query: 357 EKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTG 416
K++ +ES RLLKME+ LHKRV+GQ+EA+KA+S+AIRR R GLK+P RP SFIF+GPTG
Sbjct: 475 FKLTEEESSRLLKMEDELHKRVVGQNEAIKALSQAIRRTRAGLKDPKRPGGSFIFAGPTG 534
Query: 417 VGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRR 476
VGK+ELAKALA + FG E+A+I LDMSE+ E+HTVS+L G+PPGYVGY EGGQLTE VRR
Sbjct: 535 VGKTELAKALAEFLFGEEDALITLDMSEYSEKHTVSRLFGAPPGYVGYEEGGQLTEKVRR 594
Query: 477 RPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKG 536
RP++VVLFDE+EKAH D+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N+G+ I K
Sbjct: 595 RPFSVVLFDEVEKAHADLFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNLGTRDISK- 653
Query: 537 GRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADI 596
GF D + + YNR+++ VTEELKQ+FRPEFLNR+D+++VF QLT+ E+ EI D+
Sbjct: 654 SVATGFQSGTDTQ-TGYNRMRARVTEELKQHFRPEFLNRVDDVVVFPQLTQDEIIEIVDL 712
Query: 597 MLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLARE 656
+ + RLK KD+ +++T + + GY+P+ GARPLRR I R +ED ++EK+L E
Sbjct: 713 FVTRLERRLKDKDMGIELTPAAKVLLATRGYDPAMGARPLRRTIQREIEDQLSEKILFGE 772
Query: 657 IKEGDSVIVDVDSDGN 672
+ GD V+VDVD +G+
Sbjct: 773 LHSGDIVVVDVDGEGD 788
>gi|218134185|ref|ZP_03462989.1| hypothetical protein BACPEC_02075 [[Bacteroides] pectinophilus ATCC
43243]
gi|217991560|gb|EEC57566.1| ATPase family associated with various cellular activities (AAA)
[[Bacteroides] pectinophilus ATCC 43243]
Length = 819
Score = 785 bits (2028), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 383/647 (59%), Positives = 511/647 (78%), Gaps = 9/647 (1%)
Query: 20 NKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAI 79
N TL++Y +LT+L EGKLDPV+GR+ +IERV+QIL RRTKNNPCLIGEPGVGKTAI
Sbjct: 164 NSTQTLDQYSRDLTQLVREGKLDPVIGREKEIERVIQILSRRTKNNPCLIGEPGVGKTAI 223
Query: 80 AEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILF 139
AEG+A +IA+GDVPDTI+ K+++TLD+ +VAG+KYRGEFEER+KK++ E+KQ+ ++LF
Sbjct: 224 AEGIAAKIAAGDVPDTIKDKRLVTLDLSGMVAGSKYRGEFEERIKKVIAEVKQAGNVLLF 283
Query: 140 IDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPV 199
+DE+HT+IGAG AEGAIDA+NILKPSLARGE+Q IGATTL+EYRK+IEKD ALERRFQPV
Sbjct: 284 LDELHTIIGAGGAEGAIDASNILKPSLARGEIQLIGATTLEEYRKYIEKDAALERRFQPV 343
Query: 200 KVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDE 259
+V EPS +E + ILKGLR +YE HHK+ TDEA+ +A ++S +YI+DRFLPDKAIDLIDE
Sbjct: 344 RVEEPSEEEAVLILKGLRPKYEEHHKVTITDEAVEAAVKMSSRYINDRFLPDKAIDLIDE 403
Query: 260 AGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALV 319
A SRVRL +P+ ++LE ++ Q+ EK + +R + +E AGE++ ++ L+ ++
Sbjct: 404 AASRVRLSSYAMPDSIKKLESQISQLENEKEDCIRHEAYEDAGEIKKKQNKLREKVKK-- 461
Query: 320 DKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVI 379
+E K +TE V E +I +V+ WT IPV+K++ ES+RL+K+EETLH RV+
Sbjct: 462 -SREEWEKTKTEQ---QLFVGENEIADVVAMWTKIPVQKLAVAESERLMKLEETLHARVV 517
Query: 380 GQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIR 439
GQDEAV A++RAIRR RVGLK+P RPI SF+F GPTGVGK+EL+KALA FGSE A+IR
Sbjct: 518 GQDEAVTAVARAIRRGRVGLKDPKRPIGSFLFLGPTGVGKTELSKALADAMFGSESALIR 577
Query: 440 LDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMML 499
+DMSE+ME+HTVSK+IGSPPGYVGY EGGQL+E VRR PY+V+LFDEIEKAHPDVFN++L
Sbjct: 578 VDMSEYMEKHTVSKIIGSPPGYVGYDEGGQLSEKVRRNPYSVILFDEIEKAHPDVFNILL 637
Query: 500 QILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSL 559
Q+L+DG +TDS GR VDFKNT++IMTSN G+ I + +GF++ DEK ++ +K
Sbjct: 638 QVLDDGHITDSTGRVVDFKNTVIIMTSNAGAENI-VAPKTLGFNVGSDEK-QNHELMKGR 695
Query: 560 VTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDR-LKTKDIELQVTERF 618
V EE+++ F+PEFLNR+DE+IVF L K +++I DIM+K V R L+ I +++TE
Sbjct: 696 VMEEVRRLFKPEFLNRIDEIIVFHVLNKSHMEKIVDIMIKNVNARTLEQMKISIELTEEA 755
Query: 619 RERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIV 665
++ ++++GY+ YGARPLRRAI +ED MAEK+L IK+G+ V+V
Sbjct: 756 KQYIIDKGYDSKYGARPLRRAIQTEIEDPMAEKILEGTIKQGNRVLV 802
>gi|159040200|ref|YP_001539453.1| ATPase [Salinispora arenicola CNS-205]
gi|157919035|gb|ABW00463.1| ATPase AAA-2 domain protein [Salinispora arenicola CNS-205]
Length = 844
Score = 785 bits (2027), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/671 (58%), Positives = 523/671 (77%), Gaps = 15/671 (2%)
Query: 3 GESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRT 62
G+ A G G + + L+++G NLT+ A EGKLDPV+GR+ +IERV+Q+L RRT
Sbjct: 147 GKEPAAAGTAPGEAAPSTSL-VLDQFGRNLTQAAREGKLDPVIGREKEIERVMQVLSRRT 205
Query: 63 KNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEER 122
KNNP LIGEPGVGKTA+ EGL+QRI G+VP+T++ K++ TLD+G LVAG++YRG+FEER
Sbjct: 206 KNNPVLIGEPGVGKTAVVEGLSQRIVKGEVPETLKDKQLYTLDLGALVAGSRYRGDFEER 265
Query: 123 LKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEY 182
LKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEY
Sbjct: 266 LKKVLKEIRTRGDIILFIDEIHTLVGAGAAEGAIDAASILKPMLARGELQTIGATTLDEY 325
Query: 183 RKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQ 242
RKH+EKD ALERRFQP++V EPS+ TI+ILKGLR+RYE HH++ TD ALV+AA L+ +
Sbjct: 326 RKHLEKDAALERRFQPIQVGEPSLAHTIEILKGLRDRYEAHHRVSITDAALVAAATLADR 385
Query: 243 YISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAG 302
YISDRFLPDKAIDLIDEAG+R+R+R P + R+ ++ + Q+ ++K A+ QDFE+A
Sbjct: 386 YISDRFLPDKAIDLIDEAGARMRIRRMTAPPDLRDFDERIAQVRRDKESAIDAQDFERAA 445
Query: 303 ELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKV 359
+LRD E L Q K + E +AGD+ VVTEVD I ++ WTGIPV K+
Sbjct: 446 QLRDTEKQLLGQ--------KAQREKEWKAGDL-DVVTEVDDEQIAEVLGNWTGIPVYKL 496
Query: 360 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 419
+ +E+ RLL+ME+ LHKRVIGQ++AVKA+S+AIRR R GLK+P RP SFIF+GP+GVGK
Sbjct: 497 TEEETSRLLRMEDELHKRVIGQEDAVKAVSKAIRRTRAGLKDPKRPSGSFIFAGPSGVGK 556
Query: 420 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 479
+EL+KALA + FGSE+A+I+LDMSEF +R+TVS+L+G+PPGYVGY EGGQLTE VRRRP+
Sbjct: 557 TELSKALAEFLFGSEDALIQLDMSEFHDRYTVSRLVGAPPGYVGYDEGGQLTEKVRRRPF 616
Query: 480 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 539
+VVLFDEIEKAHPDVFN +LQILEDGRLTD +GR VDFKNT++I+T+N+G+ + K
Sbjct: 617 SVVLFDEIEKAHPDVFNTLLQILEDGRLTDGQGRIVDFKNTVIILTTNLGTRDVAK-AVS 675
Query: 540 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 599
+GF D+ DS+Y+R+K V +ELKQ+FRPEFLNR+D+ IVF QL E+ I DIM+
Sbjct: 676 LGFQAS-DDSDSNYDRMKQKVNDELKQHFRPEFLNRIDDTIVFHQLRHQEILSIVDIMIG 734
Query: 600 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 659
+ +L+ KD+ L++T+ ++ + +G++P GARPLRR I R +ED+++E++L E+
Sbjct: 735 RIETQLRNKDMGLELTDNAKKYLATKGFDPVLGARPLRRTIQRDIEDNLSERILFNELTP 794
Query: 660 GDSVIVDVDSD 670
G ++VD D D
Sbjct: 795 GQIIVVDCDGD 805
>gi|408826980|ref|ZP_11211870.1| ATPase AAA [Streptomyces somaliensis DSM 40738]
Length = 841
Score = 785 bits (2026), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/676 (58%), Positives = 521/676 (77%), Gaps = 16/676 (2%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTL--EEYGTNLTKLAEEGKLDPVVGRQPQIERVVQIL 58
+ G S A GG + G +L +++G NLT+ A E KLDPV+GR+ +IERV+Q+L
Sbjct: 142 LSGYSGGKEAATAGGPAEGTPSTSLVLDQFGRNLTQAARESKLDPVIGREKEIERVMQVL 201
Query: 59 GRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGE 118
RRTKNNP LIGEPGVGKTA+ EGLAQ I G+VP+T++ K + TLD+G LVAG++YRG+
Sbjct: 202 SRRTKNNPVLIGEPGVGKTAVVEGLAQAIVKGEVPETLKDKHLYTLDLGALVAGSRYRGD 261
Query: 119 FEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATT 178
FEERLKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATT
Sbjct: 262 FEERLKKVLKEIRTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIGATT 321
Query: 179 LDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQ 238
LDEYRK++EKD ALERRFQP++V EPS+ TI+ILKGLR+RYE HH++ TDEALV AA
Sbjct: 322 LDEYRKYLEKDAALERRFQPIQVAEPSLPHTIEILKGLRDRYEAHHRVSITDEALVQAAT 381
Query: 239 LSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDF 298
L+ +YISDRFLPDKAIDLIDEAGSR+R+R P + RE ++++ + ++K A+ QDF
Sbjct: 382 LADRYISDRFLPDKAIDLIDEAGSRMRIRRMTAPPDLREFDEKIAGVRRDKESAIDAQDF 441
Query: 299 EKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIP 355
EKA LRD+E L A K + E +AGD+ VV EVD I +++ TGIP
Sbjct: 442 EKAASLRDKEKQLLA--------AKAKREKEWKAGDM-DVVAEVDGELIAEVLATATGIP 492
Query: 356 VEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPT 415
V K++ +ES RLL+ME+ LHKRVIGQ +A+KA+S+AIRR R GLK+P RP SFIF+GP+
Sbjct: 493 VFKLTEEESSRLLRMEDELHKRVIGQKDAIKALSQAIRRTRAGLKDPKRPGGSFIFAGPS 552
Query: 416 GVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVR 475
GVGK+EL+K LA + FG E+AMI LDMSEF E+HTVS+L GSPPGYVGY EGGQLTE VR
Sbjct: 553 GVGKTELSKTLAEFLFGDEDAMISLDMSEFSEKHTVSRLFGSPPGYVGYEEGGQLTEKVR 612
Query: 476 RRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEK 535
R+P++VVLFDE+EKAHPD+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N+G+ I K
Sbjct: 613 RKPFSVVLFDEVEKAHPDIFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNLGTRDISK 672
Query: 536 GGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIAD 595
G +GF D K + Y R+K+ V EELKQ+FRPEFLNR+D+ +VF QL++ ++ +I D
Sbjct: 673 -GFNLGFAAQGDVK-TGYERMKAKVNEELKQHFRPEFLNRVDDTVVFHQLSQEDIIQIVD 730
Query: 596 IMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAR 655
+M+ +V +RLK +D+ ++++ + + ++GY+P GARPLRR I R +ED ++EK+L
Sbjct: 731 LMVAKVDERLKDRDMGIELSGDAKILLAKKGYDPVLGARPLRRTIQREIEDVLSEKILFG 790
Query: 656 EIKEGDSVIVDVDSDG 671
E++ G V+VD + +G
Sbjct: 791 ELRPGHIVVVDTEGEG 806
>gi|453050790|gb|EME98316.1| putative ATP-dependent Clp protease [Streptomyces mobaraensis NBRC
13819 = DSM 40847]
Length = 841
Score = 785 bits (2026), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/687 (57%), Positives = 522/687 (75%), Gaps = 16/687 (2%)
Query: 11 AGVGGGSSGNKMPTL--EEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCL 68
A GG + G +L +++G NLT+ A E KLDPV+GR+ +IERV+Q+L RRTKNNP L
Sbjct: 151 ATAGGPAEGTPSTSLVLDQFGRNLTQAARESKLDPVIGREKEIERVMQVLSRRTKNNPVL 210
Query: 69 IGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLME 128
IGEPGVGKTA+ EGLAQ I G+VP+T++ K + TLD+G LVAG++YRG+FEERLKK+++
Sbjct: 211 IGEPGVGKTAVVEGLAQAIVKGEVPETLKDKHLYTLDLGALVAGSRYRGDFEERLKKVLK 270
Query: 129 EIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEK 188
EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEYRKH+EK
Sbjct: 271 EIRTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIGATTLDEYRKHLEK 330
Query: 189 DPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRF 248
D ALERRFQP++V EPS+ TI+ILKGLR+RYE HH++ TDEALV AA L+ +YISDRF
Sbjct: 331 DAALERRFQPIQVAEPSLPHTIEILKGLRDRYEAHHRVSITDEALVQAATLADRYISDRF 390
Query: 249 LPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDRE 308
LPDKAIDLIDEAGSR+R+R P + RE ++++ + +EK A+ QDFEKA LRD+E
Sbjct: 391 LPDKAIDLIDEAGSRMRIRRMTAPPDLREFDEKIADVRREKESAIDSQDFEKAASLRDKE 450
Query: 309 MDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKVSTDESD 365
L A K + E +AGD+ VV EVD I +++ TGIPV K++ +ES
Sbjct: 451 KQLLA--------AKAKREKEWKAGDM-DVVAEVDGELIAEVLATATGIPVFKLTEEESS 501
Query: 366 RLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKA 425
RLL+ME+ LHKRVIGQ +A+KA+S+AIRR R GLK+P RP SFIF+GP+GVGK+EL+K
Sbjct: 502 RLLRMEDELHKRVIGQKDAIKALSQAIRRTRAGLKDPKRPGGSFIFAGPSGVGKTELSKT 561
Query: 426 LAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFD 485
LA + FG E+A+I LDMSEF E+HTVS+L GSPPGYVGY EGGQLTE VRR+P++VVLFD
Sbjct: 562 LAEFLFGDEDALISLDMSEFSEKHTVSRLFGSPPGYVGYEEGGQLTEKVRRKPFSVVLFD 621
Query: 486 EIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLD 545
E+EKAHPD+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N+G+ I K G +GF
Sbjct: 622 EVEKAHPDIFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNLGTRDISK-GFNLGFAAQ 680
Query: 546 YDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRL 605
D K + Y R+K+ V EELKQ+FRPEFLNR+D+ +VF QL++ ++ +I D+M+ +V +RL
Sbjct: 681 GDVK-TGYERMKAKVNEELKQHFRPEFLNRVDDTVVFHQLSQEDIIQIVDLMIAKVDERL 739
Query: 606 KTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIV 665
+ +D+ ++++ ++ + + GY+P GARPLRR I R +ED ++EK+L E++ G V+V
Sbjct: 740 RDRDMGIELSGDAKQLLAKRGYDPILGARPLRRTIQREIEDILSEKILFGELRPGHIVVV 799
Query: 666 DVDSDGNVTVLNGSSGAPESLADPLPV 692
+ +G +L D PV
Sbjct: 800 GTEGEGEEKKFTFRGEEKSALPDTPPV 826
>gi|336321879|ref|YP_004601847.1| ATPase AAA [[Cellvibrio] gilvus ATCC 13127]
gi|336105460|gb|AEI13279.1| ATPase AAA-2 domain protein [[Cellvibrio] gilvus ATCC 13127]
Length = 860
Score = 785 bits (2026), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/675 (58%), Positives = 522/675 (77%), Gaps = 22/675 (3%)
Query: 3 GESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRT 62
G+ A G G SG+ + L+++G NLT+ A + KLDPV+GR+ +IERV+Q+L RRT
Sbjct: 147 GKEPVAAGGPQEGQPSGSAV--LDQFGRNLTQAARDNKLDPVIGREKEIERVMQVLSRRT 204
Query: 63 KNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEER 122
KNNP LIGEPGVGKTA+ EGLAQ I GDVP+T++ K++ TLD+G LVAG++YRG+FEER
Sbjct: 205 KNNPVLIGEPGVGKTAVVEGLAQDIVRGDVPETLKDKQLYTLDLGALVAGSRYRGDFEER 264
Query: 123 LKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEY 182
LKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEY
Sbjct: 265 LKKVLKEIRTRGDIILFIDEIHTLVGAGAAEGAIDAASILKPMLARGELQTIGATTLDEY 324
Query: 183 RKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQ 242
RK++EKDPALERRFQP++V EP++ I+ILKGLR+RYE HH++ TD ALV+AA L+ +
Sbjct: 325 RKYVEKDPALERRFQPIQVAEPNLQHAIEILKGLRDRYEAHHRVSITDSALVAAATLADR 384
Query: 243 YISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAG 302
Y++DR+LPDKAIDL+DEAG+R+R+R P E REL++E+ ++K A+ QDFEKA
Sbjct: 385 YVNDRYLPDKAIDLVDEAGARLRIRRMTAPPELRELDEEIANTRRDKESAIDEQDFEKAA 444
Query: 303 ELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKV 359
LRD+E L K E KA ++GD+ V EVD I +++ TGIPV K+
Sbjct: 445 RLRDQEKQLGL-------KRAEKEKA-WKSGDL-DAVAEVDEELIAEVLANATGIPVFKL 495
Query: 360 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 419
+ +ES RLL ME+ LHKRV+GQ+ A+KA+S+AIRR R GLK+P RP SFIF+GPTGVGK
Sbjct: 496 TEEESSRLLHMEDNLHKRVVGQNAAIKALSQAIRRTRAGLKDPKRPGGSFIFAGPTGVGK 555
Query: 420 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 479
+ELAKALA + FG E+A+I+LDMSEF E+HTVS+L GSPPGYVGY EGGQLTE VRRRP+
Sbjct: 556 TELAKALAEFLFGDEDALIQLDMSEFSEKHTVSRLFGSPPGYVGYDEGGQLTEKVRRRPF 615
Query: 480 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKG--- 536
+VVLFDE+EKAH D+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N+G+ I KG
Sbjct: 616 SVVLFDEVEKAHADIFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNLGTRDIAKGVMT 675
Query: 537 GRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADI 596
G + G DL D Y R+K+ V +ELK +FRPEFLNR+D+++VF QL++ E+ I D+
Sbjct: 676 GFQAGGDLSTD-----YERMKAKVNDELKTHFRPEFLNRVDDVVVFPQLSQPEIFSIVDL 730
Query: 597 MLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLARE 656
M+ ++ RL+ KD+ L++T ++ + E+GY+P GARPLRRAI R +ED+++EK+L E
Sbjct: 731 MIAKLDQRLRDKDMGLEITPAAKKLLSEKGYDPVLGARPLRRAIQREIEDALSEKILFGE 790
Query: 657 IKEGDSVIVDVDSDG 671
+K G VIVD + +G
Sbjct: 791 LKAGQQVIVDAEGEG 805
>gi|345016096|ref|YP_004818450.1| ATPase AAA [Streptomyces violaceusniger Tu 4113]
gi|344042445|gb|AEM88170.1| ATPase AAA-2 domain protein [Streptomyces violaceusniger Tu 4113]
Length = 841
Score = 785 bits (2026), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/688 (57%), Positives = 521/688 (75%), Gaps = 16/688 (2%)
Query: 10 GAGVGGGSSGNKMPTL--EEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPC 67
A GG + G +L +++G NLT+ A E KLDPV+GR+ +IERV+Q+L RRTKNNP
Sbjct: 150 AATAGGPAEGTPSTSLVLDQFGRNLTQAARESKLDPVIGREKEIERVMQVLSRRTKNNPV 209
Query: 68 LIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLM 127
LIGEPGVGKTA+ EGLAQ I G+VP+T++ K + TLD+G LVAG++YRG+FEERLKK++
Sbjct: 210 LIGEPGVGKTAVVEGLAQAIVKGEVPETLKDKHLYTLDLGALVAGSRYRGDFEERLKKVL 269
Query: 128 EEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIE 187
+EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEYRK++E
Sbjct: 270 KEIRTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIGATTLDEYRKYLE 329
Query: 188 KDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDR 247
KD ALERRFQP++V EPS+ TI+ILKGLR+RYE HH++ TD ALV+AA L+ +YISDR
Sbjct: 330 KDAALERRFQPIQVAEPSLPHTIEILKGLRDRYEAHHRVSITDSALVAAATLADRYISDR 389
Query: 248 FLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDR 307
FLPDKAIDLIDEAGSR+R+R P + RE ++++ + +EK A+ QDFE A LRD+
Sbjct: 390 FLPDKAIDLIDEAGSRMRIRRMTAPPDLREFDEKIADVRREKESAIDSQDFEMAAGLRDK 449
Query: 308 EMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKVSTDES 364
E L A K + E +AGD+ VV EVD I +++ TGIPV K++ +ES
Sbjct: 450 EKQLLA--------AKAKREKEWKAGDM-DVVAEVDEELIAEVLATATGIPVFKLTEEES 500
Query: 365 DRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAK 424
RLL+ME+ LHKRVIGQ +A+KA+S+AIRR R GLK+P RP SFIF+GP+GVGK+EL+K
Sbjct: 501 SRLLRMEDELHKRVIGQKDAIKALSQAIRRTRAGLKDPKRPGGSFIFAGPSGVGKTELSK 560
Query: 425 ALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLF 484
LA + FG E+AMI LDMSEF E+HTVS+L GSPPGYVGY EGGQLTE VRR+P++VVLF
Sbjct: 561 TLAEFLFGDEDAMISLDMSEFSEKHTVSRLFGSPPGYVGYEEGGQLTEKVRRKPFSVVLF 620
Query: 485 DEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDL 544
DE+EKAHPD+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N+G+ I K G +GF
Sbjct: 621 DEVEKAHPDIFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNLGTRDISK-GFNLGFAA 679
Query: 545 DYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDR 604
D K + Y R+K+ V EELKQ+FRPEFLNR+D+ +VF QLT+ ++ +I D+M +V +R
Sbjct: 680 QGDVK-TGYERMKNKVNEELKQHFRPEFLNRVDDTVVFHQLTEEDIIQIVDLMTTKVDER 738
Query: 605 LKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVI 664
LK +D+ ++++ ++ + + GY+P GARPLRR I R +ED ++EK+L E++ G V+
Sbjct: 739 LKDRDMGIELSGEAKKLLAKRGYDPVLGARPLRRTIQREIEDVLSEKILFGELRSGHIVV 798
Query: 665 VDVDSDGNVTVLNGSSGAPESLADPLPV 692
VD + +G +L D P+
Sbjct: 799 VDTEGEGEEKKFTFRGEEKSALPDTPPI 826
>gi|160935533|ref|ZP_02082908.1| hypothetical protein CLOBOL_00423 [Clostridium bolteae ATCC
BAA-613]
gi|158441277|gb|EDP18987.1| hypothetical protein CLOBOL_00423 [Clostridium bolteae ATCC
BAA-613]
Length = 869
Score = 785 bits (2026), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 383/660 (58%), Positives = 514/660 (77%), Gaps = 9/660 (1%)
Query: 12 GVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGE 71
G G GN PTL+ Y NLT+LA GKLDPV+GR+ +I+RV+QIL RRTKNNPCLIGE
Sbjct: 156 GARAGKRGNATPTLDSYSRNLTQLATAGKLDPVIGREQEIQRVIQILSRRTKNNPCLIGE 215
Query: 72 PGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIK 131
PGVGKTA+ EGLAQ IASG+VP+TI K+V+TLD+ +VAG+KYRGEFEER+KK++ E+
Sbjct: 216 PGVGKTAVVEGLAQMIASGNVPETIADKRVVTLDLSGMVAGSKYRGEFEERIKKVISEVV 275
Query: 132 QSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPA 191
+S +++LFIDE+HT+IGAG AEGA+DA+NILKPSLARGE+Q IGATT++EYRK+IEKD A
Sbjct: 276 ESGDVLLFIDEIHTIIGAGGAEGALDASNILKPSLARGEIQLIGATTINEYRKYIEKDSA 335
Query: 192 LERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPD 251
LERRFQPV V EP+ DE++ ILKGLR RYE HHK+ TD AL +A +LS +YI+DRFLPD
Sbjct: 336 LERRFQPVTVDEPTEDESVAILKGLRSRYEEHHKVEITDHALEAAVKLSSRYINDRFLPD 395
Query: 252 KAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDL 311
KAIDLIDEA S+VRL++ P + ++ E E+ + + K EA++ + +EKAGE++ ++ +
Sbjct: 396 KAIDLIDEAASKVRLQNYTKPAKIKDYEAEIDGLEEAKEEAIKREAYEKAGEIKKKQEKI 455
Query: 312 KAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKME 371
+ +I+ ++K ++ +++ +V++ +I +VS WT IPV K++ +ES+RL +E
Sbjct: 456 REKIAQTMEKWQKDKESKK------LIVSDNEIADVVSGWTRIPVRKLAEEESERLRNLE 509
Query: 372 ETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYF 431
LH+RV+GQ+EAV AIS+AIRR RVGLK+P RPI SF+F GPTGVGK+EL+KAL+ F
Sbjct: 510 GILHQRVVGQEEAVTAISKAIRRGRVGLKDPKRPIGSFLFLGPTGVGKTELSKALSEAMF 569
Query: 432 GSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAH 491
G+E A+IR+DMSE+ME+H+VSK+IGSPPGYVGY EGGQL+E VRR PY V+LFDEIEKAH
Sbjct: 570 GTENALIRVDMSEYMEKHSVSKMIGSPPGYVGYDEGGQLSEKVRRNPYCVILFDEIEKAH 629
Query: 492 PDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDS 551
PDVFN++LQ+L+DG +TD++GR +DFKNT++IMTSN G+ I +R+GF + D K +
Sbjct: 630 PDVFNILLQVLDDGHITDAQGRKIDFKNTIIIMTSNAGAENI-ISPKRLGFGMVSDAK-A 687
Query: 552 SYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTK-DI 610
YN +K V +E+K+ F+PEFLNR+DE+IVF QLT+ +K IADIML + R K + I
Sbjct: 688 DYNFMKDRVMDEVKRLFKPEFLNRIDEIIVFHQLTREHIKGIADIMLGTIGKRCKEQLGI 747
Query: 611 ELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSD 670
L+VT+ RE ++++GY+ YGARPLRR I L+ED MAE+ML IK G V V D +
Sbjct: 748 GLEVTDSAREHLIDKGYDDKYGARPLRRTIQNLVEDRMAEEMLDGRIKAGSLVEVGFDGE 807
>gi|84497246|ref|ZP_00996068.1| putative ATP-dependent Clp protease [Janibacter sp. HTCC2649]
gi|84382134|gb|EAP98016.1| putative ATP-dependent Clp protease [Janibacter sp. HTCC2649]
Length = 848
Score = 784 bits (2025), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/672 (57%), Positives = 520/672 (77%), Gaps = 16/672 (2%)
Query: 25 LEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLA 84
L+++G NLT A EGKLDPV+GR+ +IERV+Q+L RRTKNNP LIGEPGVGKTA+ EGLA
Sbjct: 172 LDQFGRNLTVAAREGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLA 231
Query: 85 QRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVH 144
Q I G+VP+T++ K++ TLD+G LVAG++YRG+FEERLKK+++EI+ +I+LFIDE+H
Sbjct: 232 QDIVRGEVPETLKDKQLYTLDLGALVAGSRYRGDFEERLKKVLKEIRTRGDIVLFIDEIH 291
Query: 145 TLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEP 204
TL+GAGAAEGAIDAA+ILKP LARGELQ +GATTLDEYRKHIEKD ALERRFQP++V EP
Sbjct: 292 TLVGAGAAEGAIDAASILKPMLARGELQVVGATTLDEYRKHIEKDAALERRFQPIQVAEP 351
Query: 205 SVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRV 264
++ TI+ILKGLR+RYE HH++ TD ALV+AA ++ +YI+DRFLPDKAIDLIDEAG+R+
Sbjct: 352 TLAHTIEILKGLRDRYEAHHRVSITDSALVAAANMADRYINDRFLPDKAIDLIDEAGARL 411
Query: 265 RLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKE 324
R+R P + RE +++++ + +EK A+ GQDFEKA LRD E +L+ + K
Sbjct: 412 RIRRMTAPPDLREFDEKIQAVVREKESAIDGQDFEKAARLRDDEKNLRNE--------KS 463
Query: 325 MSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQ 381
+ E ++GD+ VV EVD I +++A TGIPV K++ +ES RLL ME+ LHKRV+G
Sbjct: 464 QRETEWKSGDL-DVVAEVDEELIAEVLAASTGIPVFKLTEEESSRLLHMEDELHKRVVGM 522
Query: 382 DEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLD 441
D+A+KA+S+AIRR R GLK+P RP SFIF+GPTGVGK+ELAK LAA+ FG E+++I+LD
Sbjct: 523 DDAIKALSQAIRRTRAGLKDPRRPGGSFIFAGPTGVGKTELAKTLAAFLFGDEDSLIQLD 582
Query: 442 MSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQI 501
MSE+ E+HTVS+L GSPPGYVGY EGGQLTE VRR+P++VVLFDE+EKAHP++FN +LQ+
Sbjct: 583 MSEYSEKHTVSRLFGSPPGYVGYEEGGQLTEKVRRKPFSVVLFDEVEKAHPEIFNSLLQV 642
Query: 502 LEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVT 561
LEDGRLTDS+GR VDFKNT++IMT+N+G+ I K +GF E S Y+R+K+ V
Sbjct: 643 LEDGRLTDSQGRVVDFKNTVIIMTTNLGTRDISKAS--LGFSAG-PETRSDYDRMKAKVV 699
Query: 562 EELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRER 621
+ELKQ+FRPEFLNR+D+ IVF QLT+ E+ +I D+ + ++ RLK KD+ +++T +
Sbjct: 700 DELKQHFRPEFLNRVDDTIVFPQLTQDEIIQIVDLEIAKLDKRLKDKDMGMELTPAAKTL 759
Query: 622 VVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNGSSG 681
+ + GY+P GARPLRR I R +ED ++EK+L E+K G+ V VD +G +
Sbjct: 760 LAKRGYDPVLGARPLRRTIQREIEDVLSEKILFGELKAGEIVAVDATGEGKDDTFTFAGA 819
Query: 682 APESLADPLPVV 693
+ D +PVV
Sbjct: 820 RKAEIVD-VPVV 830
>gi|152973929|ref|YP_001373446.1| ATPase [Bacillus cytotoxicus NVH 391-98]
gi|152022681|gb|ABS20451.1| ATPase AAA-2 domain protein [Bacillus cytotoxicus NVH 391-98]
Length = 811
Score = 784 bits (2025), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/662 (59%), Positives = 515/662 (77%), Gaps = 9/662 (1%)
Query: 5 STEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKN 64
S EA G S+ PTL+ +LT +A E +LDPV+GR +I+RV+++L RRTKN
Sbjct: 144 SNEAASGHQGASSTNANTPTLDSLARDLTVIARESRLDPVIGRSKEIQRVIEVLSRRTKN 203
Query: 65 NPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLK 124
NP LIGEPGVGKTAIAEGLAQ+I + +VP+T+ K+V+TLDMG +VAGTKYRGEFE+RLK
Sbjct: 204 NPVLIGEPGVGKTAIAEGLAQQIVNNEVPETLRDKRVMTLDMGTVVAGTKYRGEFEDRLK 263
Query: 125 KLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRK 184
K+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTLDEYRK
Sbjct: 264 KVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEYRK 323
Query: 185 HIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYI 244
+IEKD ALERRFQP++V EPS++E+IQILKGLR+RYE HH++ TD+A+ A +LS +YI
Sbjct: 324 YIEKDAALERRFQPIQVDEPSLEESIQILKGLRDRYEAHHRVSITDDAIEVAVKLSDRYI 383
Query: 245 SDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGEL 304
+DRFLPDKAIDLIDEA S+VRLR P +ELE +L +I KEK+ AV+ Q+FEKA L
Sbjct: 384 TDRFLPDKAIDLIDEAASKVRLRSYTTPPNLKELEVKLEEIRKEKDAAVQSQEFEKAASL 443
Query: 305 RDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDES 364
RD E L+ ++ + KE + G VT DI ++VS WT IPV K++ E+
Sbjct: 444 RDMEQRLREKLEDTKRQWKE------QQGKENSEVTVEDIANVVSTWTRIPVSKLAQTET 497
Query: 365 DRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAK 424
D+LL +E LH RVIGQDEAV A+++A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+
Sbjct: 498 DKLLNLESILHDRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELAR 557
Query: 425 ALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLF 484
ALA FG E+AMIR+DMSE+ME+H+ S+L+GSPPGYVGY EGGQLTE VRR+PY+VVL
Sbjct: 558 ALAESMFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPYSVVLL 617
Query: 485 DEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDL 544
DE+EKAHPDVFN++LQ+LEDGRLTDSKGRTVDF+NT++IMTSNVG+ + K + +GF++
Sbjct: 618 DEVEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTIVIMTSNVGAEAL-KRNKHLGFNV 676
Query: 545 DYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDR 604
+ +D Y +K V +ELK+ FRPEFLNR+DE+IVF L K ++EI +M+ ++ R
Sbjct: 677 QDESRD--YADMKGKVMDELKKAFRPEFLNRIDEIIVFHMLEKKHIQEIVTLMVNQLVKR 734
Query: 605 LKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVI 664
L+ ++I L++T+ E + ++G++ YGARPLRRAI + +ED ++E++L I++G VI
Sbjct: 735 LEEQEIYLELTDAAIEAIADKGFDREYGARPLRRAIQKHVEDRLSEELLKGVIEKGQKVI 794
Query: 665 VD 666
D
Sbjct: 795 FD 796
>gi|359426609|ref|ZP_09217692.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Gordonia
amarae NBRC 15530]
gi|358238174|dbj|GAB07274.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Gordonia
amarae NBRC 15530]
Length = 845
Score = 784 bits (2025), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/666 (58%), Positives = 519/666 (77%), Gaps = 18/666 (2%)
Query: 11 AGVGGGSSGNKMPT----LEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNP 66
AG GG SS + P+ L+++G NLT A EGKLDPV+GR+ +IERV+Q+L RRTKNNP
Sbjct: 153 AGTGGRSSESGTPSTSLVLDQFGRNLTAAASEGKLDPVIGREKEIERVMQVLSRRTKNNP 212
Query: 67 CLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKL 126
LIGEPGVGKTA+ EGLAQ I +G VP+T++ K++ TLD+G LVAG++YRG+FEERLKK+
Sbjct: 213 VLIGEPGVGKTAVVEGLAQAIVNGQVPETLKDKQLYTLDLGSLVAGSRYRGDFEERLKKV 272
Query: 127 MEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHI 186
++EI +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEYRK+I
Sbjct: 273 LKEINTRGDIILFIDELHTLVGAGAAEGAIDAASILKPKLARGELQTIGATTLDEYRKYI 332
Query: 187 EKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISD 246
EKD ALERRFQPV+V EPSV+ TI+ILKGLR+RYE HH++ TD ALV+AA L+ +YI+D
Sbjct: 333 EKDAALERRFQPVQVGEPSVEHTIEILKGLRDRYEAHHRVSITDGALVAAATLADRYIND 392
Query: 247 RFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRD 306
RFLPDKAIDLIDEAG+R+R+R P + RE ++ + + KEK A+ QDFEKA LRD
Sbjct: 393 RFLPDKAIDLIDEAGARMRIRRMTAPPDLREFDERIAEARKEKESAIDAQDFEKAASLRD 452
Query: 307 REMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKVSTDE 363
+E L A+ + + + +GD+ VV EVD I ++ WTGIPV K++ +E
Sbjct: 453 KEKTLVAE--------RAEREKQWRSGDM-DVVAEVDDEQIAEVLGNWTGIPVFKLTEEE 503
Query: 364 SDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELA 423
+ RLL+ME+ LHKR+IGQ++AVKA+S+AIRR R GLK+P RP SFIF+GP+GVGK+EL+
Sbjct: 504 TTRLLRMEDELHKRIIGQEDAVKAVSKAIRRTRAGLKDPKRPSGSFIFAGPSGVGKTELS 563
Query: 424 KALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVL 483
KALA + FG ++A+I++DM EF +R T S+L G+PPGYVGY EGGQLTE VRR+P++VVL
Sbjct: 564 KALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVVL 623
Query: 484 FDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFD 543
FDEIEKAH +++N +LQ+LEDGRLTD +GRTVDFKNT+LI TSN+G+S I K +GF
Sbjct: 624 FDEIEKAHSEIYNTLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGTSDISK-AVGLGFS 682
Query: 544 LDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFD 603
+ D K S+Y R+K V +ELK++FRPEFLNR+D++IVF QLT+ E+ ++ D+M+ V
Sbjct: 683 KNDDSK-SNYERMKLKVNDELKKHFRPEFLNRIDDVIVFHQLTQDEIIQMVDLMIARVET 741
Query: 604 RLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSV 663
+LK KD+ L++T++ + + + G++P GARPLRR I R +ED ++EK+L E+ G V
Sbjct: 742 QLKNKDMALELTDKAKSLLAKRGFDPVLGARPLRRTIQREIEDQLSEKILFGELTAGQIV 801
Query: 664 IVDVDS 669
+VDV++
Sbjct: 802 LVDVEN 807
>gi|311743343|ref|ZP_07717150.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Aeromicrobium
marinum DSM 15272]
gi|311313411|gb|EFQ83321.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Aeromicrobium
marinum DSM 15272]
Length = 837
Score = 784 bits (2024), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/696 (56%), Positives = 521/696 (74%), Gaps = 17/696 (2%)
Query: 4 ESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTK 63
+ EA AG ++ L+++G NLT+ A EGKLDPV+GR+ QIERV+Q+L RRTK
Sbjct: 146 QGKEAEAAGAPADNAPATSAVLDQFGRNLTQAAREGKLDPVIGRENQIERVMQVLSRRTK 205
Query: 64 NNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERL 123
NNP LIGEPGVGKT + EGLAQ I GDVP+T++ K++ TLD+G LVAG++YRG+FEERL
Sbjct: 206 NNPVLIGEPGVGKTTVVEGLAQDIVRGDVPETLKDKQIYTLDLGALVAGSRYRGDFEERL 265
Query: 124 KKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYR 183
KK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDE+R
Sbjct: 266 KKVLKEIRTRGDIILFIDEIHTLVGAGAAEGAIDAASILKPMLARGELQTIGATTLDEFR 325
Query: 184 KHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQY 243
KH EKD ALERRFQP++VPEPSV TI++LKGLR+RYE HH++ TDEALV+AA L+ +Y
Sbjct: 326 KHFEKDAALERRFQPIQVPEPSVAHTIEMLKGLRDRYEAHHRVTITDEALVAAATLADRY 385
Query: 244 ISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGE 303
+SDRFLPDKAIDL+DEAGSR+R+R P + +E ++++ + + K A+ QDFE A
Sbjct: 386 VSDRFLPDKAIDLVDEAGSRLRIRRMTAPPDLKEFDEKISDVRRRKEGAIDAQDFEAAAS 445
Query: 304 LRDREMDLKAQISALVDKGKEMSKAETEAG--DVGPVVTEVDIQHIVSAWTGIPVEKVST 361
+RD E L A K + + +AG DV VV E I +++ TGIP+ K+S
Sbjct: 446 MRDEEKKLIA--------AKNERERQWKAGDMDVVAVVDEELIAEVLALATGIPIVKLSE 497
Query: 362 DESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSE 421
+ES RLL ME L KRVIGQ EA+KA+SRAIRR R GLK+P RP SFIF+GP+GVGK+
Sbjct: 498 EESSRLLNMEAELGKRVIGQHEAIKALSRAIRRTRAGLKDPKRPGGSFIFAGPSGVGKTW 557
Query: 422 LAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTV 481
L+K LA + FG ++A+I+LDMSE+ E+HTVS+L GSPPGYVGY EGGQLTE VRR+P++V
Sbjct: 558 LSKTLANFLFGDDDALIQLDMSEYSEKHTVSRLFGSPPGYVGYEEGGQLTEKVRRKPFSV 617
Query: 482 VLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIG 541
VLFDE+EKAHPD+FN +LQILE+GRLTDS+GR +DFKNT++IMT+N+G+ I K G +G
Sbjct: 618 VLFDEVEKAHPDIFNSLLQILEEGRLTDSQGRVIDFKNTVIIMTTNLGTRDIAK-GVNLG 676
Query: 542 FDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEV 601
F D + SY+++K+ V+EELKQ+FRPEFLNR+DE++VF LT+ E+ + D+M+ +
Sbjct: 677 FSQVGDVQ-GSYDKMKAKVSEELKQHFRPEFLNRVDEIVVFPPLTQDEIMAMVDMMISSL 735
Query: 602 FDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGD 661
RLK KD+ +++T +E + + G++P GARPLRR + R +ED+MAEKML E++ G
Sbjct: 736 ETRLKDKDMGIELTTAAKELLSKRGFDPVLGARPLRRTVQREIEDAMAEKMLFGELRPGQ 795
Query: 662 SVIVDVDSDGNVTVLNGSSGAPESL-----ADPLPV 692
V+VDV+ +G V A L DPL V
Sbjct: 796 IVLVDVEGEGVSAVFTFEGTAKADLELTEGTDPLAV 831
>gi|159037791|ref|YP_001537044.1| ATPase [Salinispora arenicola CNS-205]
gi|157916626|gb|ABV98053.1| ATPase AAA-2 domain protein [Salinispora arenicola CNS-205]
Length = 836
Score = 784 bits (2024), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/694 (57%), Positives = 531/694 (76%), Gaps = 16/694 (2%)
Query: 3 GESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRT 62
G+ A G G + + L+++G NLT+ A EGKLDPV+GR+ +IERV+Q+L RRT
Sbjct: 147 GKEPAAAGTAPGEAAPSTSL-VLDQFGRNLTQAAREGKLDPVIGREKEIERVMQVLSRRT 205
Query: 63 KNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEER 122
KNNP LIGEPGVGKTA+ EGL+QRI G+VP+T++ K++ TLD+G LVAG++YRG+FEER
Sbjct: 206 KNNPVLIGEPGVGKTAVVEGLSQRIVKGEVPETLKDKQLYTLDLGALVAGSRYRGDFEER 265
Query: 123 LKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEY 182
LKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEY
Sbjct: 266 LKKVLKEIRTRGDIILFIDEIHTLVGAGAAEGAIDAASILKPMLARGELQTIGATTLDEY 325
Query: 183 RKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQ 242
RKH+EKD ALERRFQP++V EPS+ TI+ILKGLR+RYE HH++ TD ALV+AA L+ +
Sbjct: 326 RKHLEKDAALERRFQPIQVGEPSLAHTIEILKGLRDRYEAHHRVSITDAALVAAATLADR 385
Query: 243 YISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAG 302
YISDRFLPDKAIDLIDEAG+R+R+R P + R+ ++ + Q+ ++K A+ QDFE+A
Sbjct: 386 YISDRFLPDKAIDLIDEAGARMRIRRMTAPPDLRDFDERIAQVRRDKESAIDAQDFERAA 445
Query: 303 ELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKV 359
+LRD E L Q K + E +AGD+ VVTEVD I ++ WTGIPV K+
Sbjct: 446 QLRDTEKQLLGQ--------KAQREKEWKAGDLD-VVTEVDDEQIAEVLGNWTGIPVYKL 496
Query: 360 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 419
+ +E+ RLL+ME+ LHKRVIGQ++AVKA+S+AIRR R GLK+P RP SFIF+GP+GVGK
Sbjct: 497 TEEETSRLLRMEDELHKRVIGQEDAVKAVSKAIRRTRAGLKDPKRPSGSFIFAGPSGVGK 556
Query: 420 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 479
+EL+KALA + FGSE+A+I+LDMSEF +R+TVS+L+G+PPGYVGY EGGQLTE VRRRP+
Sbjct: 557 TELSKALAEFLFGSEDALIQLDMSEFHDRYTVSRLVGAPPGYVGYDEGGQLTEKVRRRPF 616
Query: 480 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 539
+VVLFDEIEKAHPDVFN +LQILEDGRLTD +GR VDFKNT++I+T+N+G+ + K
Sbjct: 617 SVVLFDEIEKAHPDVFNTLLQILEDGRLTDGQGRIVDFKNTVIILTTNLGTRDVAK-AVS 675
Query: 540 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 599
+GF D+ DS+Y+R+K V +ELKQ+FRPEFLNR+D+ IVF QL E+ I DIM+
Sbjct: 676 LGFQAS-DDSDSNYDRMKQKVNDELKQHFRPEFLNRIDDTIVFHQLRHQEILSIVDIMIG 734
Query: 600 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 659
+ +L+ KD+ L++T+ ++ + +G++P GARPLRR I R +ED+++E++L E+
Sbjct: 735 RIETQLRNKDMGLELTDNAKKYLATKGFDPVLGARPLRRTIQRDIEDNLSERILFNELTP 794
Query: 660 GDSVIVDVDSD-GNVTVLNGSSGAPESLADPLPV 692
G ++VD D D N+ + + A P P+
Sbjct: 795 GQIIVVDCDGDPTNIDTSTLTFHGTDKPATPGPI 828
>gi|302544384|ref|ZP_07296726.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Streptomyces
hygroscopicus ATCC 53653]
gi|302462002|gb|EFL25095.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Streptomyces
himastatinicus ATCC 53653]
Length = 840
Score = 784 bits (2024), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/688 (57%), Positives = 522/688 (75%), Gaps = 16/688 (2%)
Query: 10 GAGVGGGSSGNKMPTL--EEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPC 67
A GG + G +L +++G NLT+ A E KLDPV+GR+ +IERV+Q+L RRTKNNP
Sbjct: 150 AATAGGPAEGTPSTSLVLDQFGRNLTQAARESKLDPVIGREKEIERVMQVLSRRTKNNPV 209
Query: 68 LIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLM 127
LIGEPGVGKTA+ EGLAQ I G+VP+T++ K + TLD+G LVAG++YRG+FEERLKK++
Sbjct: 210 LIGEPGVGKTAVVEGLAQAIVKGEVPETLKDKHLYTLDLGALVAGSRYRGDFEERLKKVL 269
Query: 128 EEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIE 187
+EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEYRK++E
Sbjct: 270 KEIRTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIGATTLDEYRKYLE 329
Query: 188 KDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDR 247
KD ALERRFQP++V EPS+ TI+ILKGLR+RYE HH++ TD ALV+AA L+ +YISDR
Sbjct: 330 KDAALERRFQPIQVAEPSLPHTIEILKGLRDRYEAHHRVSITDSALVAAATLADRYISDR 389
Query: 248 FLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDR 307
FLPDKAIDLIDEAGSR+R+R P + RE ++++ + +EK A+ QDFE A LRD+
Sbjct: 390 FLPDKAIDLIDEAGSRMRIRRMTAPPDLREFDEKIADVRREKESAIDSQDFEMAAGLRDK 449
Query: 308 EMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKVSTDES 364
E L A K + E +AGD+ VV EVD I +++ TGIPV K++ +ES
Sbjct: 450 EKQLLA--------AKAKREKEWKAGDM-DVVAEVDEELIAEVLATATGIPVFKLTEEES 500
Query: 365 DRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAK 424
RLL+ME+ LHKRVIGQ +A+KA+S+AIRR R GLK+P RP SFIF+GP+GVGK+EL+K
Sbjct: 501 SRLLRMEDELHKRVIGQKDAIKALSQAIRRTRAGLKDPKRPGGSFIFAGPSGVGKTELSK 560
Query: 425 ALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLF 484
LA + FG E+AMI LDMSEF E+HTVS+L GSPPGYVGY EGGQLTE VRR+P++VVLF
Sbjct: 561 TLAEFLFGDEDAMISLDMSEFSEKHTVSRLFGSPPGYVGYEEGGQLTEKVRRKPFSVVLF 620
Query: 485 DEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDL 544
DE+EKAHPD+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N+G+ I K G +GF
Sbjct: 621 DEVEKAHPDIFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNLGTRDISK-GFNLGFAA 679
Query: 545 DYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDR 604
D K + Y R+K+ V EELKQ+FRPEFLNR+D+ +VF QLT+ ++ +I D+M+ +V +R
Sbjct: 680 QGDVK-TGYERMKNKVNEELKQHFRPEFLNRVDDTVVFHQLTEEDIIQIVDLMITKVDER 738
Query: 605 LKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVI 664
LK +D+ ++++ ++ + + GY+P GARPLRR I R +ED ++EK+L E++ G V+
Sbjct: 739 LKDRDMGIELSGVAKKLLAKRGYDPVLGARPLRRTIQREIEDVLSEKILFGELRPGHIVV 798
Query: 665 VDVDSDGNVTVLNGSSGAPESLADPLPV 692
VD + +G +L D P+
Sbjct: 799 VDTEGEGEEKKFTFRGEEKSALPDTPPI 826
>gi|334335989|ref|YP_004541141.1| ATPase AAA-2 domain-containing protein [Isoptericola variabilis
225]
gi|334106357|gb|AEG43247.1| ATPase AAA-2 domain protein [Isoptericola variabilis 225]
Length = 855
Score = 784 bits (2024), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 394/672 (58%), Positives = 525/672 (78%), Gaps = 16/672 (2%)
Query: 3 GESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRT 62
G+ A G G SG+ + L+++G NLT+ A EGKLDPV+GR +IERV+Q+L RRT
Sbjct: 147 GKEPVATGGPQEGQPSGSAV--LDQFGRNLTQAAREGKLDPVIGRTTEIERVMQVLSRRT 204
Query: 63 KNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEER 122
KNNP LIGEPGVGKTA+ EGLAQ I GDVP+T++ K++ TLD+G LVAG++YRG+FEER
Sbjct: 205 KNNPVLIGEPGVGKTAVVEGLAQDIVRGDVPETLKDKQLYTLDLGALVAGSRYRGDFEER 264
Query: 123 LKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEY 182
LKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEY
Sbjct: 265 LKKVLKEIRTRGDIILFIDEIHTLVGAGAAEGAIDAASILKPMLARGELQTIGATTLDEY 324
Query: 183 RKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQ 242
RK++EKDPALERRFQP++V EPS++ I+ILKGLR+RYE HH++ TD ALVSAA L+ +
Sbjct: 325 RKYVEKDPALERRFQPIQVAEPSLEHAIEILKGLRDRYEAHHRVSITDSALVSAATLADR 384
Query: 243 YISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAG 302
YI+DR+LPDKAIDLIDEAG+R+R+R P E + L++E+ + +EK A+ QDFEKA
Sbjct: 385 YINDRYLPDKAIDLIDEAGARLRIRRMTAPPELKVLDEEIAEARREKESAIDEQDFEKAA 444
Query: 303 ELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKV 359
LRD+E L + + DK K + ++ V EVD I +++ TGIPV K+
Sbjct: 445 GLRDKEKQLTQKRA---DKEKAWKSGDLDS------VAEVDEELIAEVLAMSTGIPVVKL 495
Query: 360 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 419
+ +ES RLL ME+ LHKRV+GQ++A+KA+S+AIRR R GLK+P RP SFIF+GPTGVGK
Sbjct: 496 TEEESSRLLHMEDELHKRVVGQEQAIKALSQAIRRTRAGLKDPKRPGGSFIFAGPTGVGK 555
Query: 420 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 479
+ELAKALA + FG E+A+I+LDMSEF E+HTVS+L GSPPGYVGY EGGQLTE VRRRP+
Sbjct: 556 TELAKALAEFLFGDEDALIQLDMSEFSEKHTVSRLFGSPPGYVGYDEGGQLTEKVRRRPF 615
Query: 480 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 539
+VVLFDE+EKAH D+FN +LQ+LEDGRLTDS+GR VDFKNT++IMT+N+G+ I K G +
Sbjct: 616 SVVLFDEVEKAHADIFNTLLQVLEDGRLTDSQGRVVDFKNTVIIMTTNLGTRDIAK-GVQ 674
Query: 540 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 599
GF+ D +SY R+K+ V EELKQ+FRPEFLNR+D+++VF QL++ E+ +I D+ +
Sbjct: 675 TGFNAGGDLV-TSYERMKAKVNEELKQHFRPEFLNRVDDVVVFPQLSQDEIIQIVDLEIA 733
Query: 600 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 659
++ RL+ KD+ +++T + + E+GY+P GARPL+RAI R +ED+++EK+L E+K
Sbjct: 734 KLDRRLRDKDMGIELTPAAKHLLAEKGYDPVLGARPLKRAIQREIEDALSEKILFGELKA 793
Query: 660 GDSVIVDVDSDG 671
G+ VI+D + +G
Sbjct: 794 GEVVIIDGEGEG 805
>gi|310657474|ref|YP_003935195.1| protein disaggregation chaperone [[Clostridium] sticklandii]
gi|308824252|emb|CBH20290.1| protein disaggregation chaperone [[Clostridium] sticklandii]
Length = 821
Score = 783 bits (2023), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/671 (58%), Positives = 517/671 (77%), Gaps = 10/671 (1%)
Query: 3 GESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRT 62
G+ G S PTL +YG +LTK A+E +LDPV+GR +IER++QIL RRT
Sbjct: 147 GKEPNQAGNTSSMNSQNPNTPTLNQYGVDLTKEADENRLDPVIGRSKEIERIIQILSRRT 206
Query: 63 KNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEER 122
KNNP LIG+PGVGKTAI EGLAQ+I SGD+P T++ K+++TL+MG L+AG KYRGEFEER
Sbjct: 207 KNNPVLIGDPGVGKTAIIEGLAQKINSGDIPSTLKNKRIMTLEMGNLLAGAKYRGEFEER 266
Query: 123 LKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEY 182
+KK++EE+K + ++I+FIDE+H L GAG AEGAIDA+NI+KP+LARGE+Q +GATT+DEY
Sbjct: 267 VKKIVEELKANKDVIIFIDEIHNLAGAGGAEGAIDASNIMKPALARGEIQVMGATTIDEY 326
Query: 183 RKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQ 242
RKHIEKD ALERRFQ V V EP+ +++I+IL GLR+RYE HHK++ TDEA+ +A LS++
Sbjct: 327 RKHIEKDSALERRFQTVMVDEPNTEDSIKILHGLRDRYEAHHKVKITDEAIKAAVDLSHR 386
Query: 243 YISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAG 302
YI+DRFLPDKAIDLIDEA SRVRLR P+ +ELE +L +++ EK EA+ QDFEKA
Sbjct: 387 YITDRFLPDKAIDLIDEAASRVRLRKYMEPDNIKELEDKLSKLSMEKEEAIATQDFEKAA 446
Query: 303 ELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTD 362
++RD E +K Q+ ++ + + TE VV E DI IVS+WTG+PV ++ +
Sbjct: 447 KIRDEEKQIKEQLGENKEQWTKKNYTSTE------VVLEKDIAEIVSSWTGVPVTRLQME 500
Query: 363 ESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSEL 422
ES +LL +E LHKRVIGQ+EAV+AISRAIRRAR G+K+P RPI SFIF GPTGVGK+EL
Sbjct: 501 ESTKLLDLENILHKRVIGQEEAVEAISRAIRRARTGMKDPKRPIGSFIFLGPTGVGKTEL 560
Query: 423 AKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVV 482
+KALA F E++++R+DMSE+ME+H+VSKLIGSPPGYVGY EGGQLTE +RR+PY+VV
Sbjct: 561 SKALAEAMFEDEDSIVRIDMSEYMEKHSVSKLIGSPPGYVGYDEGGQLTEKIRRKPYSVV 620
Query: 483 LFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGF 542
LFDEIEKAHPDVFNM+LQIL+DGRLTDSKGRTVDFKNT+LIMTSNVG++ I+K + +GF
Sbjct: 621 LFDEIEKAHPDVFNMLLQILDDGRLTDSKGRTVDFKNTVLIMTSNVGATTIQK-QKTLGF 679
Query: 543 DLDYDE---KDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 599
DE + ++Y ++K V ELK+ F+PEFLNR+D++IVF LT E+++I +M+
Sbjct: 680 STVTDEEKKEKAAYEKMKDNVMVELKRSFKPEFLNRVDDIIVFHALTDRELEKIVYLMIS 739
Query: 600 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 659
+ RL K+I +++ E + + + GY+ +GARPL+RAI RLLED ++EK+L EI +
Sbjct: 740 NLEKRLMDKNITIELDEAAMKLITKNGYDLEFGARPLKRAIQRLLEDEISEKLLRGEIND 799
Query: 660 GDSVIVDVDSD 670
D++ V D
Sbjct: 800 SDNIKVTAVDD 810
>gi|374988711|ref|YP_004964206.1| putative ATP-dependent Clp protease [Streptomyces bingchenggensis
BCW-1]
gi|297159363|gb|ADI09075.1| putative ATP-dependent Clp protease [Streptomyces bingchenggensis
BCW-1]
Length = 841
Score = 783 bits (2023), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/688 (57%), Positives = 522/688 (75%), Gaps = 16/688 (2%)
Query: 10 GAGVGGGSSGNKMPTL--EEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPC 67
A GG + G +L +++G NLT+ A E KLDPV+GR+ +IERV+Q+L RRTKNNP
Sbjct: 150 AATAGGPAEGTPSTSLVLDQFGRNLTQAARESKLDPVIGREKEIERVMQVLSRRTKNNPV 209
Query: 68 LIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLM 127
LIGEPGVGKTA+ EGLAQ I G+VP+T++ K + TLD+G LVAG++YRG+FEERLKK++
Sbjct: 210 LIGEPGVGKTAVVEGLAQAIVKGEVPETLKDKHLYTLDLGALVAGSRYRGDFEERLKKVL 269
Query: 128 EEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIE 187
+EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEYRK++E
Sbjct: 270 KEIRTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIGATTLDEYRKYLE 329
Query: 188 KDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDR 247
KD ALERRFQP++V EPS+ TI+ILKGLR+RYE HH++ TD ALV+AA L+ +YISDR
Sbjct: 330 KDAALERRFQPIQVAEPSLPHTIEILKGLRDRYEAHHRVSITDSALVAAATLADRYISDR 389
Query: 248 FLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDR 307
FLPDKAIDLIDEAGSR+R+R P + RE ++++ + +EK A+ QDFE A LRD+
Sbjct: 390 FLPDKAIDLIDEAGSRMRIRRMTAPPDLREFDEKIADVRREKESAIDSQDFEMAAGLRDK 449
Query: 308 EMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKVSTDES 364
E L A K + E +AGD+ VV EVD I +++ TGIPV K++ +ES
Sbjct: 450 EKQLLA--------AKAKREKEWKAGDM-DVVAEVDEELIAEVLATATGIPVFKLTEEES 500
Query: 365 DRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAK 424
RLL+ME+ LHKRVIGQ +A+KA+S+AIRR R GLK+P RP SFIF+GP+GVGK+EL+K
Sbjct: 501 SRLLRMEDELHKRVIGQKDAIKALSQAIRRTRAGLKDPKRPGGSFIFAGPSGVGKTELSK 560
Query: 425 ALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLF 484
LA + FG E+AMI LDMSEF E+HTVS+L GSPPGYVGY EGGQLTE VRR+P++VVLF
Sbjct: 561 TLAEFLFGDEDAMISLDMSEFSEKHTVSRLFGSPPGYVGYEEGGQLTEKVRRKPFSVVLF 620
Query: 485 DEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDL 544
DE+EKAHPD+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N+G+ I K G +GF
Sbjct: 621 DEVEKAHPDIFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNLGTRDISK-GFNLGFAA 679
Query: 545 DYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDR 604
D K + Y R+K+ V EELKQ+FRPEFLNR+D+ +VF QL++ ++ +I D+M+ +V +R
Sbjct: 680 QGDVK-TGYERMKAKVNEELKQHFRPEFLNRVDDTVVFHQLSEEDIIQIVDLMIAKVDER 738
Query: 605 LKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVI 664
LK +D+ ++++ ++ + + GY+P GARPLRR I R +ED ++EK+L E++ G V+
Sbjct: 739 LKDRDMGIELSGDSKKLLAKRGYDPVLGARPLRRTIQREIEDVLSEKILFGELRSGHIVV 798
Query: 665 VDVDSDGNVTVLNGSSGAPESLADPLPV 692
VD + +G +L D P+
Sbjct: 799 VDTEGEGEEKKFTFRGEEKSALPDTPPI 826
>gi|217967862|ref|YP_002353368.1| ATPase [Dictyoglomus turgidum DSM 6724]
gi|217336961|gb|ACK42754.1| ATPase AAA-2 domain protein [Dictyoglomus turgidum DSM 6724]
Length = 823
Score = 783 bits (2022), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 376/651 (57%), Positives = 512/651 (78%), Gaps = 12/651 (1%)
Query: 24 TLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGL 83
TL+E+G +LT+LA +GKLDP++GR+ ++ER++QIL RRTKNNP L+GEPGVGKTAI EGL
Sbjct: 174 TLDEFGRDLTQLARQGKLDPIIGREKELERIIQILSRRTKNNPVLVGEPGVGKTAIVEGL 233
Query: 84 AQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEV 143
AQ+I G+VPDT+ K+++ +DMG +VAGTKYRGEFEER+++++EE+K + ++ILFIDE+
Sbjct: 234 AQKIVDGEVPDTLLNKRIVAIDMGSIVAGTKYRGEFEERMQRIIEEVKMAKDVILFIDEI 293
Query: 144 HTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPE 203
HTL+GAGAAEGA+DAANILKPSLA+GE+Q IGATT EYRK+IEKD ALERRFQP+ V E
Sbjct: 294 HTLVGAGAAEGAVDAANILKPSLAKGEIQLIGATTPSEYRKYIEKDGALERRFQPIMVNE 353
Query: 204 PSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSR 263
P+ +ETIQILKGLRE+YE +H+++ TDEA+ A +LS +YI+DRFLPDKAID+IDEA +R
Sbjct: 354 PTPEETIQILKGLREKYENYHRVKITDEAIEEAVKLSVRYITDRFLPDKAIDVIDEASAR 413
Query: 264 VRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGK 323
VRLR Q LE EL +I ++K A+R Q FE+A +LRD E ++ + +D
Sbjct: 414 VRLRK-QKSTVHSNLELELARIREQKEIAIRNQAFERAAQLRDEERKIEEYLRNFIDT-- 470
Query: 324 EMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDE 383
+ D+G VVT D+ +V+ WTGIPV ++ +E +RLL+MEE LHKR+I QDE
Sbjct: 471 ------SSPSDLG-VVTPEDVAQVVATWTGIPVAQLLIEERERLLRMEEELHKRIISQDE 523
Query: 384 AVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMS 443
AV+ +SRAIRR+R GLK+P RPI F+F GPTGVGK+ELA+ALA Y FG+E A+IR DMS
Sbjct: 524 AVRVVSRAIRRSRSGLKDPRRPIGVFMFLGPTGVGKTELARALAEYLFGNENALIRFDMS 583
Query: 444 EFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILE 503
EFME+HTVS+LIG+PPGYVGY EGGQLTE V RRPY+V+LFDEIEKAH DVFN++LQI++
Sbjct: 584 EFMEKHTVSRLIGAPPGYVGYEEGGQLTEKVHRRPYSVILFDEIEKAHSDVFNILLQIMD 643
Query: 504 DGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEE 563
+G+LTD GR V FKNT+LIMTSN G+ ++ IGF ++++ S+++IK L+ E
Sbjct: 644 EGQLTDGHGRRVSFKNTILIMTSNFGAEYFKQEA-SIGF-ASKEDREKSFDKIKDLILSE 701
Query: 564 LKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVV 623
+K+YFRPEFLNRLDE++ F+ LTK ++K+I +++LK V +R++ K +EL++++ +E ++
Sbjct: 702 MKKYFRPEFLNRLDEIVFFKPLTKEDLKQILELLLKPVQERIREKKLELEISDEVKELLL 761
Query: 624 EEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVT 674
E+GY+P YGARPL+R I +ED +AE +L + KEGD + ++D G +
Sbjct: 762 EKGYDPQYGARPLKRTIQYYIEDPLAEFILQGDFKEGDIIRAELDKKGEIV 812
>gi|86743058|ref|YP_483458.1| ATPase [Frankia sp. CcI3]
gi|86569920|gb|ABD13729.1| ATPase AAA-2 [Frankia sp. CcI3]
Length = 834
Score = 783 bits (2022), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/674 (59%), Positives = 523/674 (77%), Gaps = 18/674 (2%)
Query: 24 TLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGL 83
L+++G NLT A E KLDPV+GR+ +IERV+Q+L RRTKNNP LIGEPGVGKTA+ EGL
Sbjct: 167 VLDQFGRNLTAAARESKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGL 226
Query: 84 AQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEV 143
AQ I G+VP+T++ K++ TLD+G LVAG++YRG+FEERLKK+++EI+ +IILFIDE+
Sbjct: 227 AQAIIKGEVPETLKDKQLYTLDLGALVAGSRYRGDFEERLKKVLKEIRTRGDIILFIDEL 286
Query: 144 HTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPE 203
HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEYRKH+EKD ALERRFQP++V E
Sbjct: 287 HTLVGAGAAEGAIDAASILKPMLARGELQTIGATTLDEYRKHLEKDAALERRFQPIQVAE 346
Query: 204 PSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSR 263
PSV TI+ILKGLR+RYE HH++ TD ALV+AA L+ +YISDRFLPDKAIDLIDEAGSR
Sbjct: 347 PSVAHTIEILKGLRDRYEAHHRVSITDAALVAAASLADRYISDRFLPDKAIDLIDEAGSR 406
Query: 264 VRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGK 323
+R+R P + RE ++ + + ++K A+ QDFEKA LRD+E L L +K K
Sbjct: 407 MRIRRMTAPPDLREFDERIAAVRRDKESAIDAQDFEKAASLRDKEKTL------LSEKAK 460
Query: 324 EMSKAETEAGDVGPVVTEV---DIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIG 380
+ E +AGD+ VV EV +I +++ WTGIPV K++ +E+ RLL+ME+ LHKRVIG
Sbjct: 461 R--EKEWKAGDM-DVVAEVGDEEIAEVLAIWTGIPVFKLTEEETARLLRMEDELHKRVIG 517
Query: 381 QDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRL 440
Q +A+KA+S+AIRR R GLK+P RP SFIF+GP+GVGK+EL+K LA + FG E+A+I+L
Sbjct: 518 QQQAIKAVSQAIRRTRAGLKDPKRPGGSFIFAGPSGVGKTELSKTLAEFLFGDEDALIQL 577
Query: 441 DMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQ 500
DMSE+ME+HTVS+L+GSPPGYVGY EGGQLTE VRR+P++VVLFDE+EKAHPDVFN +LQ
Sbjct: 578 DMSEYMEKHTVSRLVGSPPGYVGYEEGGQLTERVRRKPFSVVLFDEVEKAHPDVFNTLLQ 637
Query: 501 ILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLV 560
ILEDGRLTDS+GR VDFKNT+LIMTSN+G+ I KG IGF D Y R+K+ V
Sbjct: 638 ILEDGRLTDSQGRLVDFKNTVLIMTSNLGTRDISKGP-GIGFATGQGAVD--YERMKAKV 694
Query: 561 TEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRE 620
+ELKQ+FRPEFLNR+D++IVF QL++ E+ +I D+ML V +LK KD+ L++T +
Sbjct: 695 QDELKQHFRPEFLNRIDDIIVFHQLSEAEIIQIVDLMLARVDAQLKNKDMALELTSAAKA 754
Query: 621 RVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVT--VLNG 678
+ ++GY+P GARPLRR I R +ED ++EK+L +K G+ V+ DV+ DG+ V G
Sbjct: 755 LLAKKGYDPVLGARPLRRTIQREIEDVLSEKILYGTLKPGEIVVGDVEGDGDEAKFVFRG 814
Query: 679 SSGAPESLADPLPV 692
+ P + D PV
Sbjct: 815 EA-KPNQVPDAPPV 827
>gi|404257466|ref|ZP_10960792.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Gordonia
namibiensis NBRC 108229]
gi|403404139|dbj|GAB99201.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Gordonia
namibiensis NBRC 108229]
Length = 827
Score = 783 bits (2022), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/665 (58%), Positives = 514/665 (77%), Gaps = 18/665 (2%)
Query: 11 AGVGGGSSGNKMPT----LEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNP 66
AG GG SS + P+ L+++G NLT A EGKLDPV+GR+ +IERV+Q+L RRTKNNP
Sbjct: 132 AGTGGRSSESGTPSTSLVLDQFGRNLTAAAAEGKLDPVIGREKEIERVMQVLSRRTKNNP 191
Query: 67 CLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKL 126
LIGEPGVGKTA+ EGLAQ I +G VP+T++ K++ TLD+G LVAG++YRG+FEERLKK+
Sbjct: 192 VLIGEPGVGKTAVVEGLAQAIVNGQVPETLKDKQLYTLDLGSLVAGSRYRGDFEERLKKV 251
Query: 127 MEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHI 186
++EI +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEYRK+I
Sbjct: 252 LKEINTRGDIILFIDELHTLVGAGAAEGAIDAASILKPKLARGELQTIGATTLDEYRKYI 311
Query: 187 EKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISD 246
EKD ALERRFQPV+V EPSV+ TI+ILKGLR+RYE HH++ TD ALV+AA L+ +YI+D
Sbjct: 312 EKDAALERRFQPVQVGEPSVEHTIEILKGLRDRYESHHRVSITDGALVAAATLADRYIND 371
Query: 247 RFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRD 306
RFLPDKAIDLIDEAG+R+R+R P + RE ++ + KEK A+ QDFEKA LRD
Sbjct: 372 RFLPDKAIDLIDEAGARMRIRRMTAPPDLREFDERIADARKEKESAIDAQDFEKAASLRD 431
Query: 307 REMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKVSTDE 363
+E L A+ + + + +GD+ VV EVD I ++ WTGIPV K++ +E
Sbjct: 432 KEKQLVAE--------RAEREKQWRSGDM-DVVAEVDDEQIAEVLGNWTGIPVFKLTEEE 482
Query: 364 SDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELA 423
+ RLL+MEE LHKR+IGQ++AVKA+S+AIRR R GLK+P RP SFIF+GP+GVGK+EL+
Sbjct: 483 TTRLLRMEEELHKRIIGQEDAVKAVSKAIRRTRAGLKDPKRPSGSFIFAGPSGVGKTELS 542
Query: 424 KALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVL 483
KALA + FG ++A+I++DM EF +R T S+L G+PPGYVGY EGGQLTE VRR+P++VVL
Sbjct: 543 KALANFLFGEDDALIQIDMGEFHDRFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVVL 602
Query: 484 FDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFD 543
FDEIEKAH +++N +LQ+LEDGRLTD +GRTVDFKNT+LI TSN+G+S I K +GF
Sbjct: 603 FDEIEKAHSEIYNTLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGTSDISK-AVGMGFS 661
Query: 544 LDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFD 603
D+ S Y R+K V +ELK++FRPEFLNR+D+++VF QLT+ E+ ++ D+ML V
Sbjct: 662 -SKDDTKSGYERMKQKVNDELKKHFRPEFLNRIDDIVVFHQLTRDEIIQMVDLMLTRVES 720
Query: 604 RLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSV 663
LK KD+ L+VT+R + + + G++P GARPLRR I R +ED ++EK+L ++ G V
Sbjct: 721 ALKNKDMALEVTDRAKSLLAKRGFDPVLGARPLRRTIQREIEDQLSEKILFGDVAPGQIV 780
Query: 664 IVDVD 668
+VDV+
Sbjct: 781 LVDVE 785
>gi|291542191|emb|CBL15301.1| ATPases with chaperone activity, ATP-binding subunit [Ruminococcus
bromii L2-63]
Length = 821
Score = 783 bits (2022), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/667 (58%), Positives = 512/667 (76%), Gaps = 14/667 (2%)
Query: 15 GGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGV 74
GGS+ L+++G +LT+ A+ G++DPV+GR+ +I+RV+QIL RRTKNNP LIGEPGV
Sbjct: 167 GGSA------LDKFGRDLTQAAKNGEIDPVIGREKEIQRVIQILSRRTKNNPVLIGEPGV 220
Query: 75 GKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSD 134
GKTA+AEGLA IA G+VP+ ++ K+V++LD+ +VAG KYRG+FEER+K ++E+K+S
Sbjct: 221 GKTAVAEGLALEIAKGNVPEILKDKRVVSLDLTGMVAGAKYRGDFEERIKAAIDEVKKSK 280
Query: 135 EIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALER 194
ILFIDE+HT++GAGAAEG+ DAANILKPSLARG+ Q IGATTL+EYRK+IEKD ALER
Sbjct: 281 NTILFIDELHTIVGAGAAEGSADAANILKPSLARGDFQVIGATTLNEYRKYIEKDAALER 340
Query: 195 RFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAI 254
RFQPVKV EP+ ++ +QILKGLR+ YE HHK++ TDEA+ +A LS +YI+DR+LPDKAI
Sbjct: 341 RFQPVKVGEPTPEQAVQILKGLRDSYEAHHKVKITDEAINAAVTLSSRYIADRYLPDKAI 400
Query: 255 DLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQ 314
DLIDE S+VRL P+ +ELE E+ KEK A+ QDFE+A LRD + +L+ +
Sbjct: 401 DLIDEGASKVRLASLTSPDNVKELEDEIADYEKEKASAINEQDFERAARLRDEQKELQTK 460
Query: 315 ISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETL 374
+ K +E K G+ G V E DI IVS WTGIPV +++ +ES+RLL ME L
Sbjct: 461 LDDAKKKWQEQQK-----GNSGEVTAE-DIAKIVSEWTGIPVVQLTKEESERLLNMENVL 514
Query: 375 HKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSE 434
H+RVIGQ EAV AI++AIRR RVGLK+P RP+ SFIF GPTGVGK+EL KALA FG E
Sbjct: 515 HERVIGQSEAVTAIAKAIRRGRVGLKDPKRPVGSFIFLGPTGVGKTELCKALAEAMFGDE 574
Query: 435 EAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDV 494
AM+RLDMSE+ME+HTVSKLIGSPPGYVG+ EGGQLTE VRR+PY+VVLFDEIEKAHPDV
Sbjct: 575 NAMLRLDMSEYMEKHTVSKLIGSPPGYVGFEEGGQLTEKVRRKPYSVVLFDEIEKAHPDV 634
Query: 495 FNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYN 554
FNM+LQILEDGRLTDS+GRTVDFKNT++IMTSNVG+ +I + +GF+ + + + S
Sbjct: 635 FNMLLQILEDGRLTDSQGRTVDFKNTIIIMTSNVGARLITEKQSSLGFNSENENAEESEK 694
Query: 555 R-IKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQ 613
+ IK LVT EL++ FRPEFLNR+D++IVF +L K E+K+IA MLK + +RL +I++
Sbjct: 695 KDIKELVTGELRKVFRPEFLNRVDDIIVFNKLNKDEIKQIAVKMLKTLENRLDKMNIKIS 754
Query: 614 VTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNV 673
T+ ++ ++G++ +YGARPLRRAI +ED ++E+ML ++K+G V D +DG
Sbjct: 755 FTDNAVSKIADKGFDENYGARPLRRAIQNEIEDPLSEQMLEGKVKDGAVVTCDF-ADGQF 813
Query: 674 TVLNGSS 680
T ++
Sbjct: 814 TFTTANA 820
>gi|390559270|ref|ZP_10243621.1| class III stress response-related ATPase, AAA+ superfamily
[Nitrolancetus hollandicus Lb]
gi|390174147|emb|CCF82914.1| class III stress response-related ATPase, AAA+ superfamily
[Nitrolancetus hollandicus Lb]
Length = 817
Score = 783 bits (2022), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/669 (58%), Positives = 513/669 (76%), Gaps = 12/669 (1%)
Query: 20 NKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAI 79
K P ++ G +LT+ A + KLDPV+GRQ +IERV+QIL RRTKNNP LIGEPGVGKTAI
Sbjct: 158 TKTPYMDALGFDLTEAARQAKLDPVIGRQTEIERVMQILSRRTKNNPALIGEPGVGKTAI 217
Query: 80 AEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILF 139
EGLAQRI +GDVP+ ++ K++++LD+G LVAGTKYRGEFEERLKK++ E+K + I LF
Sbjct: 218 VEGLAQRIVAGDVPEPLQNKRLVSLDIGALVAGTKYRGEFEERLKKIVGEVKDTASI-LF 276
Query: 140 IDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPV 199
IDE+HTL+GAGAAEGA+DAANILKP+L+RGE+Q IGATTLDEYRK+IE+D ALERRFQPV
Sbjct: 277 IDELHTLVGAGAAEGAVDAANILKPALSRGEVQTIGATTLDEYRKYIERDAALERRFQPV 336
Query: 200 KVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDE 259
KV EP++DETIQIL+G+RERYE HHKL+ TDEALV+AA L +Y++DRFLPDKAIDLIDE
Sbjct: 337 KVEEPTIDETIQILRGIRERYEEHHKLKITDEALVAAATLGARYVTDRFLPDKAIDLIDE 396
Query: 260 AGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALV 319
A SRVR+ + P +E + L + E + AV GQ+FE A +LRDRE L+ +IS L
Sbjct: 397 ASSRVRMYRSASPPSLKEAMRGLESLRHELDSAVGGQEFELAADLRDRERKLQHRISDLE 456
Query: 320 DKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVI 379
+E E G P VTE DI +VS WTGIP+ ++ T+ES+RLL MEE LH+R+I
Sbjct: 457 ANWRE------EQGSTEPEVTEEDIAQVVSMWTGIPLMRLETEESERLLHMEEALHERII 510
Query: 380 GQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIR 439
GQDEA++ +S+A+RRAR GLK+P RPI SFIF GPTGVGK+ LA+ALA + FGSE+++I+
Sbjct: 511 GQDEAIETLSKAVRRARAGLKDPRRPIGSFIFLGPTGVGKTLLARALAEFIFGSEDSLIK 570
Query: 440 LDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMML 499
+DMSEFMERHTVS+L+G+PPGY+GY EGGQLTEAV R+ Y+V+L DE+EKAHP+ FNM+L
Sbjct: 571 IDMSEFMERHTVSRLVGAPPGYIGYEEGGQLTEAVHRKSYSVILLDEVEKAHPEAFNMLL 630
Query: 500 QILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKD---SSYNRI 556
QILEDG LTD+KGR VDF+NT+L+MTSNVG+ +I++ G +GF + + Y +
Sbjct: 631 QILEDGTLTDAKGRRVDFRNTILVMTSNVGAELIQREG-TLGFAAAANAEKKVMQEYQFM 689
Query: 557 KSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTE 616
K V +LKQ FRPEFLNR+D +IVF L + +++ I ++ LK + +L ++I L+++E
Sbjct: 690 KDKVLGQLKQTFRPEFLNRIDGVIVFHPLNREQIRRIVNLELKRIRLQLAEQEINLEISE 749
Query: 617 RFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTVL 676
+ + E GY+ YGARPLRR I L+ED +AE +L K G +V+VD + DG +++
Sbjct: 750 PAMDLLGERGYDRQYGARPLRRIIQNLIEDPLAEGLLQGRFKPGTTVLVD-ERDGLLSLE 808
Query: 677 NGSSGAPES 685
+ AP S
Sbjct: 809 SVKQLAPVS 817
>gi|297563907|ref|YP_003682880.1| ATPase AAA-2 domain-containing protein [Nocardiopsis dassonvillei
subsp. dassonvillei DSM 43111]
gi|296848356|gb|ADH70374.1| ATPase AAA-2 domain protein [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
Length = 836
Score = 783 bits (2022), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 388/681 (56%), Positives = 526/681 (77%), Gaps = 19/681 (2%)
Query: 16 GSSGNKMPT----LEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGE 71
G+S P+ L+++G NLT+ A E KLDPV+GR +IERV+Q+L RRTKNNP LIGE
Sbjct: 154 GASSESTPSTSLVLDQFGRNLTQAARESKLDPVIGRDKEIERVMQVLSRRTKNNPVLIGE 213
Query: 72 PGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIK 131
PGVGKTA+ EGLAQ+I G++P+T++ K++ TLD+G LVAG++YRG+FEERLKK+++EI+
Sbjct: 214 PGVGKTAVVEGLAQKIVKGEIPETLKDKQLYTLDLGALVAGSRYRGDFEERLKKVLKEIR 273
Query: 132 QSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPA 191
+IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEYRK++EKD A
Sbjct: 274 TRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIGATTLDEYRKYLEKDAA 333
Query: 192 LERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPD 251
LERRFQP++V EP++ I+ILKGLR+RYE HH++ TD ALV+AAQL+ +YISDRFLPD
Sbjct: 334 LERRFQPIQVDEPTIKHAIEILKGLRDRYEAHHRVSITDSALVAAAQLADRYISDRFLPD 393
Query: 252 KAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDL 311
KAIDLIDEAGSR+R+R P + RE ++++ + ++K A+ QDFEKA LRD E L
Sbjct: 394 KAIDLIDEAGSRMRIRRMTAPPDLREFDEKIAGVRRDKESAIDAQDFEKAASLRDDEKQL 453
Query: 312 KAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKVSTDESDRLL 368
+ K + E +AGD+ VV EVD I +++A TGIPV K++ +ES RLL
Sbjct: 454 LGK--------KAQREKEWKAGDM-DVVAEVDEELIAEVLAASTGIPVFKLTEEESSRLL 504
Query: 369 KMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAA 428
+ME+ LH+RVIGQ++A+KA+S+AIRR R GLK+P RP SFIF+GP+GVGK+EL+K LA
Sbjct: 505 RMEDELHRRVIGQEDAIKALSQAIRRTRAGLKDPKRPGGSFIFAGPSGVGKTELSKTLAE 564
Query: 429 YYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIE 488
+ FG E+A+I+LDMSEFME+HTVS+L GSPPGYVGY EGGQLTE VRR+P++VVLFDEIE
Sbjct: 565 FLFGDEDALIQLDMSEFMEKHTVSRLFGSPPGYVGYEEGGQLTEKVRRKPFSVVLFDEIE 624
Query: 489 KAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDE 548
KAH D+FN +LQ+LE+GRLTD++GR VDFKNT++IMT+N+G+ I K G+ +GF + D+
Sbjct: 625 KAHNDIFNSLLQVLEEGRLTDAQGRNVDFKNTVIIMTTNLGTRDISK-GQAMGFAKE-DD 682
Query: 549 KDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTK 608
++Y R+K+ V+EELK FRPEFLNR+D++IVF QLT+ E+ +I D+M+ + RLK +
Sbjct: 683 AQTNYERMKAKVSEELKTNFRPEFLNRVDDIIVFHQLTEKEIFQIVDLMITSLDSRLKER 742
Query: 609 DIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVD 668
D+ +++ + ++ + E G++P GARPLRR I R +ED ++EK+L ++K G V++D +
Sbjct: 743 DMGIELRPKAKQILSERGFDPVLGARPLRRTIQREIEDQLSEKILFGDLKAGQIVVIDAE 802
Query: 669 SDGNVTVLNGSSGAPESLADP 689
+G G P+ A P
Sbjct: 803 GEGTDAKFT-FKGVPKPAAVP 822
>gi|409388485|ref|ZP_11240462.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Gordonia
rubripertincta NBRC 101908]
gi|403201559|dbj|GAB83696.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Gordonia
rubripertincta NBRC 101908]
Length = 848
Score = 783 bits (2022), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/665 (58%), Positives = 513/665 (77%), Gaps = 18/665 (2%)
Query: 11 AGVGGGSSGNKMPT----LEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNP 66
AG GG SS P+ L+++G NLT A EGKLDPV+GR+ +IERV+Q+L RRTKNNP
Sbjct: 153 AGTGGRSSETGTPSTSLVLDQFGRNLTAAAAEGKLDPVIGREKEIERVMQVLSRRTKNNP 212
Query: 67 CLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKL 126
LIGEPGVGKTA+ EGLAQ I +G VP+T++ K++ TLD+G LVAG++YRG+FEERLKK+
Sbjct: 213 VLIGEPGVGKTAVVEGLAQAIVNGQVPETLKDKQLYTLDLGSLVAGSRYRGDFEERLKKV 272
Query: 127 MEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHI 186
++EI +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEYRK+I
Sbjct: 273 LKEINTRGDIILFIDELHTLVGAGAAEGAIDAASILKPKLARGELQTIGATTLDEYRKYI 332
Query: 187 EKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISD 246
EKD ALERRFQPV+V EPSV+ TI+ILKGLR+RYE HH++ TD ALV+AA L+ +YI+D
Sbjct: 333 EKDAALERRFQPVQVGEPSVEHTIEILKGLRDRYESHHRVSITDGALVAAATLADRYIND 392
Query: 247 RFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRD 306
RFLPDKAIDLIDEAG+R+R+R P + RE ++ + KEK A+ QDFEKA LRD
Sbjct: 393 RFLPDKAIDLIDEAGARMRIRRMTAPPDLREFDERIADARKEKESAIDAQDFEKAASLRD 452
Query: 307 REMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKVSTDE 363
+E L A+ + + + +GD+ VV EVD I ++ WTGIPV K++ +E
Sbjct: 453 KEKQLVAE--------RAEREKQWRSGDM-DVVAEVDDEQIAEVLGNWTGIPVFKLTEEE 503
Query: 364 SDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELA 423
+ RLL+MEE LHKR+IGQ++AVKA+S+AIRR R GLK+P RP SFIF+GP+GVGK+EL+
Sbjct: 504 TTRLLRMEEELHKRIIGQEDAVKAVSKAIRRTRAGLKDPKRPSGSFIFAGPSGVGKTELS 563
Query: 424 KALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVL 483
KALA + FG ++A+I++DM EF +R T S+L G+PPGYVGY EGGQLTE VRR+P++VVL
Sbjct: 564 KALANFLFGEDDALIQIDMGEFHDRFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVVL 623
Query: 484 FDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFD 543
FDEIEKAH +++N +LQ+LEDGRLTD +GRTVDFKNT+LI TSN+G+S I K +GF
Sbjct: 624 FDEIEKAHSEIYNTLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGTSDISK-AVGMGFS 682
Query: 544 LDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFD 603
D+ S Y R+K V +ELK++FRPEFLNR+D+++VF QLT+ E+ ++ D+ML V
Sbjct: 683 -SKDDTKSGYERMKQKVNDELKKHFRPEFLNRIDDIVVFHQLTRDEIIQMVDLMLTRVES 741
Query: 604 RLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSV 663
LK KD+ L+VT+R + + + G++P GARPLRR I R +ED ++EK+L ++ G V
Sbjct: 742 ALKNKDMALEVTDRAKSLLAKRGFDPVLGARPLRRTIQREIEDQLSEKILFGDVAPGQIV 801
Query: 664 IVDVD 668
+VDV+
Sbjct: 802 LVDVE 806
>gi|312144275|ref|YP_003995721.1| ATPase AAA-2 domain-containing protein [Halanaerobium
hydrogeniformans]
gi|311904926|gb|ADQ15367.1| ATPase AAA-2 domain protein [Halanaerobium hydrogeniformans]
Length = 817
Score = 783 bits (2021), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/658 (61%), Positives = 506/658 (76%), Gaps = 9/658 (1%)
Query: 17 SSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGK 76
SS K L+EY +LT +A E KLDPV+GR +I RV+Q+L RRTKNNP LIGEPGVGK
Sbjct: 154 SSNRKTKNLDEYSRDLTDMARENKLDPVIGRDKEINRVIQVLSRRTKNNPVLIGEPGVGK 213
Query: 77 TAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEI 136
TAI EGLAQ I S +VPD + K+V++LD+ LVAG+KYRGEFE+RLK +M EI +S EI
Sbjct: 214 TAIIEGLAQMIVSENVPDLLLNKRVVSLDLSSLVAGSKYRGEFEQRLKAVMNEIIESGEI 273
Query: 137 ILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRF 196
ILFIDE+HTL+GAGAAEGAIDAANILKP+LARGELQ +GATTLDEYRK+IEKD ALERRF
Sbjct: 274 ILFIDEMHTLVGAGAAEGAIDAANILKPALARGELQAVGATTLDEYRKYIEKDAALERRF 333
Query: 197 QPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDL 256
Q V V E SV+E I ILKGLR+ YE HHK+ TD A+ A LS++YISDRFLPDKAIDL
Sbjct: 334 QSVLVEENSVEEAIDILKGLRDPYEAHHKVEITDRAIEDAVVLSHRYISDRFLPDKAIDL 393
Query: 257 IDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQIS 316
IDEA S+VRL ++ P E +EL ++L + KEK AV+ Q+FEKA +RD+E LK ++
Sbjct: 394 IDEAASKVRLSNSTRPPEFKELSRKLEEAEKEKEAAVKNQEFEKAARMRDKEKKLKKELE 453
Query: 317 ALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHK 376
L + E E G VVT DI IVS+WTGIPV K+ E+ RLL++EE LHK
Sbjct: 454 ELKNSW------ENEKGKAEAVVTTEDIAEIVSSWTGIPVTKLEEAETARLLRLEEELHK 507
Query: 377 RVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEA 436
RVIGQDEA+ A+S A+RRAR GLK+P RPI SFIF GPTGVGK+ELAK LA F E+A
Sbjct: 508 RVIGQDEAITAVSEAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELAKTLAETMFNDEDA 567
Query: 437 MIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFN 496
MIR+DMSE+ME+H+VS+L+GSPPGYVG+ EGGQLTE VRRRPY+VVLFDEIEKAHPDVFN
Sbjct: 568 MIRVDMSEYMEKHSVSRLVGSPPGYVGHDEGGQLTEPVRRRPYSVVLFDEIEKAHPDVFN 627
Query: 497 MMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRI 556
++LQILEDG LTD+ GR VDFKNT++IMTSNVG+ IEK ++GF + DE+ S+Y +
Sbjct: 628 VLLQILEDGVLTDTHGRKVDFKNTIVIMTSNVGADFIEKQS-KLGFKTENDEQ-SNYESM 685
Query: 557 KSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTE 616
K V +L++ FRPEFLNRLDE+IVF L K +K+IAD+ML ++ +RL K++E+++TE
Sbjct: 686 KDNVITQLRKTFRPEFLNRLDEIIVFHALNKEHIKQIADLMLDDLRERLNEKEMEIEITE 745
Query: 617 RFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVT 674
++++ E+GY+ +GARPLRR I R +E+ ++ K+L +EI E + +DV DG T
Sbjct: 746 AAKDKLAEDGYDSEFGARPLRRTIQRQIENELSIKILDKEIGENSKIKIDV-VDGEYT 802
>gi|367467387|ref|ZP_09467329.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Patulibacter
sp. I11]
gi|365817543|gb|EHN12499.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Patulibacter
sp. I11]
Length = 866
Score = 783 bits (2021), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/676 (57%), Positives = 523/676 (77%), Gaps = 13/676 (1%)
Query: 3 GESTEAVGAGVGGG-SSGNKMP------TLEEYGTNLTKLAEEGKLDPVVGRQPQIERVV 55
G + G+ VGG +SG P L+++G +LTKLA EGKLDPVVGR+ +IER++
Sbjct: 146 GGRRQTAGSSVGGAPASGEGTPQKRSSKVLDQFGRDLTKLAAEGKLDPVVGRETEIERIM 205
Query: 56 QILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKY 115
QIL RRTKNNP LIGEPGVGKTA+ EGLAQRI+SGDVP+ + K++ TLD+ LVAG+KY
Sbjct: 206 QILSRRTKNNPVLIGEPGVGKTAVVEGLAQRISSGDVPELLRDKQIYTLDLAALVAGSKY 265
Query: 116 RGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIG 175
RGEFEERLKK+M+EI ++ILFIDE+H L+GAGAAEGAIDAA+ILKP+LARGELQ IG
Sbjct: 266 RGEFEERLKKVMKEIANKGDVILFIDEIHNLVGAGAAEGAIDAASILKPALARGELQTIG 325
Query: 176 ATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVS 235
ATT+DEYRK++E+D ALERRFQ V+V +PS +E +QIL+GLR+RYE HHK+ TDEALV+
Sbjct: 326 ATTIDEYRKYLERDSALERRFQQVRVEQPSTEEAVQILQGLRDRYEQHHKVEITDEALVA 385
Query: 236 AAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRG 295
A +L+ +YI+DR LPDKAIDL+DEA SR R+R P +E+E+++ + ++K+ A+
Sbjct: 386 AVELADRYIADRQLPDKAIDLVDEAASRKRIRSMGSPPVFQEVEEQIAEARRKKDAAIEA 445
Query: 296 QDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIP 355
Q++E A LRD E L + LV++ E + E +G E +I IVS WTGIP
Sbjct: 446 QEYEAAASLRDEERKLVGKKRELVEQW-EQGEGEQPRLSIG----EEEIADIVSMWTGIP 500
Query: 356 VEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPT 415
V K++ E+ RL++MEE LH+RVIGQ++AV+ +S+AIRR+R GLK+P RP SFIF GPT
Sbjct: 501 VFKLTEAETRRLMRMEEELHERVIGQEQAVQVVSKAIRRSRAGLKDPKRPTGSFIFLGPT 560
Query: 416 GVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVR 475
GVGK+ELAK+LA + FG +AM+R+DMSE+ME+H VS+L+GSPPGYVGY EGGQLTEAVR
Sbjct: 561 GVGKTELAKSLAHFLFGDADAMVRVDMSEYMEKHAVSRLVGSPPGYVGYDEGGQLTEAVR 620
Query: 476 RRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEK 535
R+PY+V+L DEIEKAHPDVFN++LQILEDGRLTDS+GRTVDF++ ++IMTSN+G+S I K
Sbjct: 621 RKPYSVLLLDEIEKAHPDVFNLLLQILEDGRLTDSQGRTVDFRHAIVIMTSNIGASEIAK 680
Query: 536 GGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIAD 595
+GF + +++ +Y +K VT ELK+ F+PEFLNR+DE+IVF +LTK E+ +I D
Sbjct: 681 -STPLGFQVGDEDESLTYEDMKQRVTGELKKAFKPEFLNRIDEVIVFHKLTKPEITQIVD 739
Query: 596 IMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAR 655
+ML V LK +++ L++T+ ++ + E+G++P+ GARPLRRAI R +ED +A+ +LA
Sbjct: 740 LMLDRVRVSLKDRELTLELTDGLKDLLAEKGWDPAMGARPLRRAIQRYIEDPLADFVLAN 799
Query: 656 EIKEGDSVIVDVDSDG 671
+IK G +V +DV +G
Sbjct: 800 QIKPGATVKIDVAPEG 815
>gi|297181778|gb|ADI17958.1| ATPases with chaperone activity, ATP-binding subunit [uncultured
Chloroflexi bacterium HF0200_09I09]
Length = 836
Score = 783 bits (2021), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 388/688 (56%), Positives = 522/688 (75%), Gaps = 13/688 (1%)
Query: 6 TEAVGAGVGGGSSGN-KMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKN 64
T+ A G G+ + PTL++ G +LT A +LDPV+GR+ +IERV+QIL RRTKN
Sbjct: 148 TQPQSAAAGSGARQTARTPTLDQLGVDLTAAARSNELDPVIGRETEIERVIQILSRRTKN 207
Query: 65 NPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLK 124
NP LIGEPGVGKT+IAEGLA RI GD+PDT+ GK+++TLD+G LVAGTKYRGEFEERLK
Sbjct: 208 NPVLIGEPGVGKTSIAEGLAHRIVQGDIPDTLLGKRMLTLDIGSLVAGTKYRGEFEERLK 267
Query: 125 KLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRK 184
K++EEI+ + ILFIDE+H L+GAGAAEGA+DAANILKP+LARGELQ IGATTLDEYRK
Sbjct: 268 KVIEEIRSAKNCILFIDELHMLVGAGAAEGAVDAANILKPALARGELQAIGATTLDEYRK 327
Query: 185 HIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYI 244
HIE+D ALERRFQPV+V EPSV+ETI+ILKG+R YE HH L+ DEA+ +A++LS +Y+
Sbjct: 328 HIERDAALERRFQPVRVDEPSVEETIEILKGVRVAYEEHHNLKIGDEAIKAASELSSRYV 387
Query: 245 SDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGEL 304
SDRFLPDKAIDLIDEA +RVR+RH P R+ K L + +EK++A+ Q +E A EL
Sbjct: 388 SDRFLPDKAIDLIDEASARVRIRHQSTPPSLRDATKGLEALRREKDQAIGNQQYEYAAEL 447
Query: 305 RDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDES 364
R+RE+ L++++ + + +TE +V++ DI+ +VS WTGIP+ +++++E+
Sbjct: 448 REREVRLQSKLE------ELEEEVQTERAGDDLIVSDEDIRDVVSMWTGIPLTRIASEET 501
Query: 365 DRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAK 424
RLL+ME+ L RVIGQDEA+ +++A+RRAR GLKNP RPI +F+F GPTGVGK+ LA+
Sbjct: 502 ARLLEMEQYLDDRVIGQDEAIGVVAKAVRRARAGLKNPKRPIGAFMFLGPTGVGKTYLAE 561
Query: 425 ALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLF 484
LA + FGS++ ++RLDMSEFME+HTVS+L+GSPPGYVGY +GGQLT+ VRRR Y ++L
Sbjct: 562 TLAEFMFGSKDNIVRLDMSEFMEKHTVSRLVGSPPGYVGYDDGGQLTDLVRRRSYCLILL 621
Query: 485 DEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDL 544
DEIEKAHPDVFNM+LQI +DG L+D+KGR VDF+NT++IMTSNVGS +I K R GFD
Sbjct: 622 DEIEKAHPDVFNMLLQIFDDGHLSDAKGRKVDFRNTIIIMTSNVGSDLIRKDT-RFGFDT 680
Query: 545 DYDEKDSS---YNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEV 601
D+ ++ Y R+K VTEE+K+ FRPEF+NR+D+ +VF L + +++I D+ LK+V
Sbjct: 681 ATDDAKTAEQQYERMKDKVTEEMKRVFRPEFINRIDQSVVFHALQEDHIRQIVDLELKDV 740
Query: 602 FDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGD 661
L+ K+I L+VT+ + + EEG++P +GARPLRR I +ED +++ +L E EG
Sbjct: 741 RQNLREKEITLEVTKTLLDHLGEEGFDPVFGARPLRRVIQNEVEDRLSDALLEGEFVEGA 800
Query: 662 SVIVDVDSDGNVTVLN-GSSGAPESLAD 688
++ +D DG VT GS+ PE A+
Sbjct: 801 TIRLDY-VDGEVTAEQIGSAHPPEPPAE 827
>gi|441512961|ref|ZP_20994794.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Gordonia
amicalis NBRC 100051]
gi|441452336|dbj|GAC52755.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Gordonia
amicalis NBRC 100051]
Length = 848
Score = 783 bits (2021), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/665 (58%), Positives = 513/665 (77%), Gaps = 18/665 (2%)
Query: 11 AGVGGGSSGNKMPT----LEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNP 66
AG GG SS + P+ L+++G NLT A EGKLDPV+GR+ +IERV+Q+L RRTKNNP
Sbjct: 153 AGTGGRSSESGTPSTSLVLDQFGRNLTAAAAEGKLDPVIGREKEIERVMQVLSRRTKNNP 212
Query: 67 CLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKL 126
LIGEPGVGKTA+ EGLAQ I +G VP+T++ K++ TLD+G LVAG++YRG+FEERLKK+
Sbjct: 213 VLIGEPGVGKTAVVEGLAQAIVNGQVPETLKDKQLYTLDLGSLVAGSRYRGDFEERLKKV 272
Query: 127 MEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHI 186
++EI +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEYRK+I
Sbjct: 273 LKEINTRGDIILFIDELHTLVGAGAAEGAIDAASILKPKLARGELQTIGATTLDEYRKYI 332
Query: 187 EKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISD 246
EKD ALERRFQPV+V EPSV+ TI+ILKGLR+RYE HH++ TD ALV+AA L+ +YI+D
Sbjct: 333 EKDAALERRFQPVQVGEPSVEHTIEILKGLRDRYESHHRVSITDGALVAAATLADRYIND 392
Query: 247 RFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRD 306
RFLPDKAIDLIDEAG+R+R+R P + RE + + KEK A+ QDFEKA LRD
Sbjct: 393 RFLPDKAIDLIDEAGARMRIRRMTAPPDLREFDDRIADARKEKESAIDAQDFEKAASLRD 452
Query: 307 REMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKVSTDE 363
+E L A+ + + + +GD+ VV EVD I ++ WTGIPV K++ +E
Sbjct: 453 KEKQLVAE--------RAEREKQWRSGDM-DVVAEVDDEQIAEVLGNWTGIPVFKLTEEE 503
Query: 364 SDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELA 423
+ RLL+MEE LHKR+IGQ++AVKA+S+AIRR R GLK+P RP SFIF+GP+GVGK+EL+
Sbjct: 504 TTRLLRMEEELHKRIIGQEDAVKAVSKAIRRTRAGLKDPKRPSGSFIFAGPSGVGKTELS 563
Query: 424 KALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVL 483
KALA + FG ++A+I++DM EF +R T S+L G+PPGYVGY EGGQLTE VRR+P++VVL
Sbjct: 564 KALANFLFGEDDALIQIDMGEFHDRFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVVL 623
Query: 484 FDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFD 543
FDEIEKAH +++N +LQ+LEDGRLTD +GRTVDFKNT+LI TSN+G+S I K +GF
Sbjct: 624 FDEIEKAHSEIYNTLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGTSDISK-AVGMGFS 682
Query: 544 LDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFD 603
D+ S Y R+K V +ELK++FRPEFLNR+D+++VF QLT+ E+ ++ D+ML V
Sbjct: 683 -SKDDTKSGYERMKQKVNDELKKHFRPEFLNRIDDIVVFHQLTRDEIIQMVDLMLTRVEA 741
Query: 604 RLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSV 663
LK KD+ L+VT+R + + + G++P GARPLRR I R +ED ++EK+L +I G V
Sbjct: 742 ALKNKDMALEVTDRAKSLLAKRGFDPVLGARPLRRTIQREIEDQLSEKILFGDIAPGQIV 801
Query: 664 IVDVD 668
+VDV+
Sbjct: 802 LVDVE 806
>gi|343925825|ref|ZP_08765340.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Gordonia
alkanivorans NBRC 16433]
gi|343764176|dbj|GAA12266.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Gordonia
alkanivorans NBRC 16433]
Length = 848
Score = 783 bits (2021), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/665 (58%), Positives = 513/665 (77%), Gaps = 18/665 (2%)
Query: 11 AGVGGGSSGNKMPT----LEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNP 66
AG GG SS + P+ L+++G NLT A EGKLDPV+GR+ +IERV+Q+L RRTKNNP
Sbjct: 153 AGTGGRSSESGTPSTSLVLDQFGRNLTAAAAEGKLDPVIGREKEIERVMQVLSRRTKNNP 212
Query: 67 CLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKL 126
LIGEPGVGKTA+ EGLAQ I +G VP+T++ K++ TLD+G LVAG++YRG+FEERLKK+
Sbjct: 213 VLIGEPGVGKTAVVEGLAQAIVNGQVPETLKDKQLYTLDLGSLVAGSRYRGDFEERLKKV 272
Query: 127 MEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHI 186
++EI +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEYRK+I
Sbjct: 273 LKEINTRGDIILFIDELHTLVGAGAAEGAIDAASILKPKLARGELQTIGATTLDEYRKYI 332
Query: 187 EKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISD 246
EKD ALERRFQPV+V EPSV+ TI+ILKGLR+RYE HH++ TD ALV+AA L+ +YI+D
Sbjct: 333 EKDAALERRFQPVQVGEPSVEHTIEILKGLRDRYESHHRVSITDGALVAAATLADRYIND 392
Query: 247 RFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRD 306
RFLPDKAIDLIDEAG+R+R+R P + RE + + KEK A+ QDFEKA LRD
Sbjct: 393 RFLPDKAIDLIDEAGARMRIRRMTAPPDLREFDDRIADARKEKESAIDAQDFEKAASLRD 452
Query: 307 REMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKVSTDE 363
+E L A+ + + + +GD+ +V EVD I ++ WTGIPV K++ +E
Sbjct: 453 KEKQLVAE--------RAEREKQWRSGDM-DIVAEVDDEQIAEVLGNWTGIPVFKLTEEE 503
Query: 364 SDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELA 423
+ RLL+MEE LHKR+IGQ++AVKA+S+AIRR R GLK+P RP SFIF+GP+GVGK+EL+
Sbjct: 504 TTRLLRMEEELHKRIIGQEDAVKAVSKAIRRTRAGLKDPKRPSGSFIFAGPSGVGKTELS 563
Query: 424 KALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVL 483
KALA + FG ++A+I++DM EF +R T S+L G+PPGYVGY EGGQLTE VRR+P++VVL
Sbjct: 564 KALANFLFGEDDALIQIDMGEFHDRFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVVL 623
Query: 484 FDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFD 543
FDEIEKAH +++N +LQ+LEDGRLTD +GRTVDFKNT+LI TSN+G+S I K +GF
Sbjct: 624 FDEIEKAHSEIYNTLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGTSDISK-AVGMGFS 682
Query: 544 LDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFD 603
D+ S Y R+K V +ELK++FRPEFLNR+D+++VF QLT+ E+ ++ D+ML V
Sbjct: 683 -SKDDTKSGYERMKQKVNDELKKHFRPEFLNRIDDIVVFHQLTRDEIIQMVDLMLTRVES 741
Query: 604 RLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSV 663
LK KD+ L+VT+R + + + G++P GARPLRR I R +ED ++EK+L +I G V
Sbjct: 742 ALKNKDMALEVTDRAKSLLAKRGFDPVLGARPLRRTIQREIEDQLSEKILFGDIAPGQIV 801
Query: 664 IVDVD 668
+VDV+
Sbjct: 802 LVDVE 806
>gi|359766456|ref|ZP_09270267.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Gordonia
polyisoprenivorans NBRC 16320]
gi|378719673|ref|YP_005284562.1| putative ATP-dependent Clp protease, ATP-binding subunit ClpC
[Gordonia polyisoprenivorans VH2]
gi|359316093|dbj|GAB23100.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Gordonia
polyisoprenivorans NBRC 16320]
gi|375754376|gb|AFA75196.1| putative ATP-dependent Clp protease, ATP-binding subunit ClpC
[Gordonia polyisoprenivorans VH2]
Length = 847
Score = 783 bits (2021), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/666 (58%), Positives = 517/666 (77%), Gaps = 18/666 (2%)
Query: 11 AGVGGGSSGNKMPT----LEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNP 66
AG GG SS + P+ L+++G NLT A EGKLDPV+GR+ +IERV+Q+L RRTKNNP
Sbjct: 153 AGTGGRSSESGTPSTSLVLDQFGRNLTAAAAEGKLDPVIGREKEIERVMQVLSRRTKNNP 212
Query: 67 CLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKL 126
LIGEPGVGKTA+ EGLAQ I +G VP+T++ K++ TLD+G LVAG++YRG+FEERLKK+
Sbjct: 213 VLIGEPGVGKTAVVEGLAQAIVNGKVPETLKDKQLYTLDLGSLVAGSRYRGDFEERLKKV 272
Query: 127 MEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHI 186
++EI +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEYRK+I
Sbjct: 273 LKEINTRGDIILFIDELHTLVGAGAAEGAIDAASILKPKLARGELQTIGATTLDEYRKYI 332
Query: 187 EKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISD 246
EKD ALERRFQPV+V EPSV+ TI+ILKGLR+RYE HH++ TD ALV+AA L+ +YI+D
Sbjct: 333 EKDAALERRFQPVQVGEPSVEHTIEILKGLRDRYESHHRVSITDGALVAAATLADRYIND 392
Query: 247 RFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRD 306
RFLPDKAIDLIDEAG+R+R+R P + RE ++ + KEK A+ QDFEKA LRD
Sbjct: 393 RFLPDKAIDLIDEAGARMRIRRMTAPPDLREFDERIADARKEKESAIDAQDFEKAAGLRD 452
Query: 307 REMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKVSTDE 363
+E L A+ + + + +GD+ VV EVD I ++ WTGIPV K++ +E
Sbjct: 453 KEKQLVAE--------RAEREKQWRSGDL-DVVAEVDDEQIAEVLGNWTGIPVFKLTEEE 503
Query: 364 SDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELA 423
+ RLL+ME+ LHKR+IGQ++AVKA+S+AIRR R GLK+P RP SFIF+GP+GVGK+EL+
Sbjct: 504 TTRLLRMEDELHKRIIGQEDAVKAVSKAIRRTRAGLKDPKRPSGSFIFAGPSGVGKTELS 563
Query: 424 KALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVL 483
KALA + FG ++A+I++DM EF +R T S+L G+PPGYVGY EGGQLTE VRR+P++VVL
Sbjct: 564 KALANFLFGEDDALIQIDMGEFHDRFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVVL 623
Query: 484 FDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFD 543
FDEIEKAH +++N +LQ+LEDGRLTD +GRTVDFKNT+LI TSN+G++ I K +GF
Sbjct: 624 FDEIEKAHSEIYNTLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGTADISK-AVGLGFS 682
Query: 544 LDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFD 603
D K S+Y R+K V +ELK++FRPEFLNR+D++IVF QLTK E+ ++ D+M+ V
Sbjct: 683 KGDDSK-SNYERMKLKVNDELKKHFRPEFLNRIDDVIVFHQLTKDEIIQMVDLMINRVET 741
Query: 604 RLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSV 663
+LK KD+ +++T+R + + + G++P GARPLRR I R +ED ++EK+L E+ G V
Sbjct: 742 QLKNKDMAIELTDRAKSLLAKRGFDPVLGARPLRRTIQREIEDQLSEKILFNELTPGQIV 801
Query: 664 IVDVDS 669
+VDVD+
Sbjct: 802 LVDVDN 807
>gi|422012810|ref|ZP_16359452.1| Clp amino terminal domain protein [Actinomyces georgiae F0490]
gi|394752669|gb|EJF36341.1| Clp amino terminal domain protein [Actinomyces georgiae F0490]
Length = 822
Score = 783 bits (2021), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/647 (59%), Positives = 515/647 (79%), Gaps = 8/647 (1%)
Query: 25 LEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLA 84
LE++G NLT+ A E KLDPV+GR+ ++ERV+Q+L RRTKNNP LIGEPGVGKTA+ EGLA
Sbjct: 174 LEQFGRNLTQAARENKLDPVIGRRTEMERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLA 233
Query: 85 QRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVH 144
Q I GDVP+TI+ +++ +LDMG LVAG++YRG+FEERLKK+++EI+ +IILFIDE+H
Sbjct: 234 QAIVHGDVPETIKDRQIYSLDMGSLVAGSRYRGDFEERLKKVLKEIRTRGDIILFIDEIH 293
Query: 145 TLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEP 204
TL+GAGAAEG+IDAA +LKP LARGELQ IGATT DEYRK+IEKD ALERRFQPVKV EP
Sbjct: 294 TLVGAGAAEGSIDAAQMLKPMLARGELQTIGATTNDEYRKYIEKDAALERRFQPVKVDEP 353
Query: 205 SVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRV 264
SV++TI+ILKGLR+RYE HH++ TDEA+ SAA+L+ +Y+SDRFLPDKAIDL+DEAG+R+
Sbjct: 354 SVEDTIEILKGLRDRYEAHHRVIITDEAIKSAAELADRYVSDRFLPDKAIDLVDEAGARL 413
Query: 265 RLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKE 324
R+R P E REL++++ ++ + K A+ QDFEKA LRD+E L + K KE
Sbjct: 414 RIRRMTAPPELRELDEKISELRRNKESAIDDQDFEKAAALRDQESKLGEE-----RKAKE 468
Query: 325 MSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEA 384
+ E+ ++ VT+ +I +++ TGIPV +++ E+ +LL+ME+ LHKRVIGQDEA
Sbjct: 469 AAWKGGESDEIAE-VTDHEIAEVLAMSTGIPVVRLTQTETSKLLRMEDELHKRVIGQDEA 527
Query: 385 VKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSE 444
VKA+S++IRR R GLK+PNRP SFIF+GPTGVGK+ELAKALA + FG E+A+I+LDMSE
Sbjct: 528 VKALSQSIRRTRSGLKDPNRPGGSFIFAGPTGVGKTELAKALAEFLFGDEDALIQLDMSE 587
Query: 445 FMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILED 504
F E+HT S+L G+PPGYVGY EGGQLTE VRR+P++VVLFDE+EKAHPD+FN +LQILE+
Sbjct: 588 FSEKHTASRLFGAPPGYVGYDEGGQLTEKVRRKPFSVVLFDEVEKAHPDIFNSLLQILEE 647
Query: 505 GRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEEL 564
GRLTDS+GR VDFKNT++IMT+N+G+ I K G GF + + Y R+KS V+EEL
Sbjct: 648 GRLTDSQGRKVDFKNTVIIMTTNLGTRDINK-GVLTGFQ-SSEHQTHDYARMKSKVSEEL 705
Query: 565 KQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVE 624
KQ+FRPEFLNR+D+ +VF L K E+K+I D+M+ ++ R++ +D+ LQ+++ RE + +
Sbjct: 706 KQHFRPEFLNRVDDTVVFPPLQKDEIKQIVDLMIAKLAKRMEAQDMHLQLSDGAREFLAD 765
Query: 625 EGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDG 671
G++P GARPLRRAI R +EDS++E++L EI+ G V V V+ +G
Sbjct: 766 LGFDPVLGARPLRRAIQREIEDSLSERILFGEIQPGQVVTVGVEGEG 812
>gi|229027929|ref|ZP_04184082.1| Negative regulator of genetic competence [Bacillus cereus AH1271]
gi|228733317|gb|EEL84146.1| Negative regulator of genetic competence [Bacillus cereus AH1271]
Length = 811
Score = 782 bits (2020), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 398/666 (59%), Positives = 519/666 (77%), Gaps = 9/666 (1%)
Query: 5 STEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKN 64
S EA GG S+ PTL+ +LT +A E +LDPV+GR +I+RV+++L RRTKN
Sbjct: 144 SNEASSGHQGGSSTNANTPTLDSLARDLTVVARENRLDPVIGRGKEIQRVIEVLSRRTKN 203
Query: 65 NPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLK 124
NP LIGEPGVGKTAIAEGLAQ+I + +VP+T+ K+V+TLDMG +VAGTKYRGEFE+RLK
Sbjct: 204 NPVLIGEPGVGKTAIAEGLAQQIVNNEVPETLRDKRVMTLDMGTVVAGTKYRGEFEDRLK 263
Query: 125 KLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRK 184
K+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTLDEYRK
Sbjct: 264 KVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEYRK 323
Query: 185 HIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYI 244
+IEKD ALERRFQP+ V EPS+DE+ QILKGLR+RYE HH++ TD+A+ +A +LS +YI
Sbjct: 324 YIEKDAALERRFQPIHVDEPSLDESTQILKGLRDRYEAHHRVSITDDAIDAAVKLSDRYI 383
Query: 245 SDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGEL 304
+DRFLPDKAIDLIDEA S+VRLR P +ELE +L +I KEK+ AV+ Q+FEKA L
Sbjct: 384 TDRFLPDKAIDLIDEAASKVRLRSYTTPPNLKELELKLEEIRKEKDAAVQSQEFEKAASL 443
Query: 305 RDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDES 364
RD E L+ ++ + KE E VT DI ++VS WT IPV K++ E+
Sbjct: 444 RDMEQRLREKLEDTKRQWKEQQGKENSE------VTVEDIANVVSTWTRIPVSKLAQTET 497
Query: 365 DRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAK 424
D+LL +E LH RVIGQDEAV A+++A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+
Sbjct: 498 DKLLNLESILHDRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELAR 557
Query: 425 ALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLF 484
ALA FG E+AMIR+DMSE+ME+H+ S+L+GSPPGYVGY EGGQLTE VRR+PY+VVL
Sbjct: 558 ALAESMFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPYSVVLL 617
Query: 485 DEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDL 544
DE+EKAHPDVFN++LQ+LEDGRLTDSKGRTVDF+NT++IMTSNVG+ +++ + +GF++
Sbjct: 618 DEVEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTIVIMTSNVGADALKR-NKHLGFNV 676
Query: 545 DYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDR 604
+ +D Y+ +K V +ELK+ FRPEFLNR+DE+IVF L K ++EI +M+ ++ +R
Sbjct: 677 QDESRD--YSDMKGKVMDELKKAFRPEFLNRIDEIIVFHMLEKKHIQEIVTLMVNQLVNR 734
Query: 605 LKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVI 664
LK ++IEL +TE + ++G++ YGARPLRRAI + +ED ++E++L I++G VI
Sbjct: 735 LKEQEIELHLTEGAISAIADKGFDREYGARPLRRAIQKHVEDRLSEELLKGAIEKGQKVI 794
Query: 665 VDVDSD 670
DV+ +
Sbjct: 795 FDVEGE 800
>gi|332982904|ref|YP_004464345.1| ATPase AAA-2 domain-containing protein [Mahella australiensis 50-1
BON]
gi|332700582|gb|AEE97523.1| ATPase AAA-2 domain protein [Mahella australiensis 50-1 BON]
Length = 855
Score = 782 bits (2020), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 388/677 (57%), Positives = 525/677 (77%), Gaps = 26/677 (3%)
Query: 5 STEAVGAGVGGGS------SGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQIL 58
+ E++ +GG NK PTL E+G +LT+ A+EGKLDPV+GR+ +I+RV++IL
Sbjct: 192 TVESLMQKIGGSKPSSKSVKNNKYPTLLEFGRDLTQEAQEGKLDPVIGREDEIKRVIRIL 251
Query: 59 GRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGE 118
RRTKNNP LIG+PGVGKTAI EGLAQRI GDVP+ + K+VI LD+G ++AGTKYRGE
Sbjct: 252 CRRTKNNPVLIGDPGVGKTAIVEGLAQRIVMGDVPENLINKRVIALDLGGMIAGTKYRGE 311
Query: 119 FEERLKKLMEEIKQ-SDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGAT 177
FEERLKK+M+EIKQ SDE+ILFIDE+HT++GAGAAEGA+DAAN+LKP+LARGEL CIGAT
Sbjct: 312 FEERLKKVMDEIKQASDEVILFIDELHTILGAGAAEGAMDAANMLKPALARGELHCIGAT 371
Query: 178 TLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAA 237
T++EYRK+IEKD ALERRFQPV + EP+V++TI+IL+GL+++YE HH++ +D+ALV+AA
Sbjct: 372 TVEEYRKYIEKDAALERRFQPVLIGEPTVEQTIEILRGLKDKYEAHHRVTISDDALVAAA 431
Query: 238 QLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQD 297
LS++YI+DR+LPDKAIDL+DEA S V + + + LE EL ++ K K AV+ ++
Sbjct: 432 TLSHRYITDRYLPDKAIDLLDEAASAVHVDSLSESDSTKTLEIELERVRKLKEAAVKNEE 491
Query: 298 FEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVE 357
+EKA + R +E DLK + K + K E P VT D+ IV+AWTGIP
Sbjct: 492 YEKAAQYRQQEEDLKRKFEE-AQKQRHSKKDENHT----PTVTADDVAAIVAAWTGIPAN 546
Query: 358 KVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGV 417
++ +E+ +LL+ME LHKRV+GQDEAVKA+S A+RRAR GLK+PNRPI SFIF GPTGV
Sbjct: 547 QLVEEEAQKLLRMEGELHKRVVGQDEAVKAVSEAVRRARTGLKDPNRPIGSFIFLGPTGV 606
Query: 418 GKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRR 477
GK+ELA+ALA + FG E+AMIR+DMSE+ME+HTVS+LIG+PPGYVG+ EGGQLTEAVRR+
Sbjct: 607 GKTELARALAEFLFGDEDAMIRIDMSEYMEKHTVSRLIGAPPGYVGHEEGGQLTEAVRRK 666
Query: 478 PYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGG 537
PY+VVLFDEIEKAHPDVFN++LQIL+DGRLTDS G+TVDFKNT++IMTSN+G+ + G
Sbjct: 667 PYSVVLFDEIEKAHPDVFNILLQILDDGRLTDSHGKTVDFKNTVIIMTSNIGARYFQAG- 725
Query: 538 RRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIM 597
Y +++ ++ L+ EEL++ FRPEFLNR+DE+I+F L K ++ I D+M
Sbjct: 726 --------YGKEE-----LEKLIHEELQRNFRPEFLNRIDEIIIFHGLEKEHMRAIVDLM 772
Query: 598 LKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREI 657
L++V +L+ + +EL+VT++ ++ + +EGY+P +GARPLRR I R LE+ ++ +L +
Sbjct: 773 LEKVRQQLRGQGMELEVTDKAKDYIAQEGYDPQFGARPLRRFIRRQLENEISNMILKGDF 832
Query: 658 KEGDSVIVDVDSDGNVT 674
K+GD ++VD+D D +
Sbjct: 833 KDGDKILVDLDEDNKLV 849
>gi|403721633|ref|ZP_10944535.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Gordonia
rhizosphera NBRC 16068]
gi|403207043|dbj|GAB88866.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Gordonia
rhizosphera NBRC 16068]
Length = 848
Score = 782 bits (2020), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/665 (59%), Positives = 516/665 (77%), Gaps = 18/665 (2%)
Query: 11 AGVGGGSSGNKMPT----LEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNP 66
AG GG S+ + P+ L+++G NLT A EGKLDPV+GR+ +IERV+Q+L RRTKNNP
Sbjct: 153 AGTGGRSTESGTPSTSLVLDQFGRNLTAAAGEGKLDPVIGREKEIERVMQVLSRRTKNNP 212
Query: 67 CLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKL 126
LIGEPGVGKTA+ EGLAQ I +G VP+T++ K++ TLD+G LVAG++YRG+FEERLKK+
Sbjct: 213 VLIGEPGVGKTAVVEGLAQAIVNGQVPETLKDKQLYTLDLGSLVAGSRYRGDFEERLKKV 272
Query: 127 MEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHI 186
++EI +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEYRK+I
Sbjct: 273 LKEINTRGDIILFIDELHTLVGAGAAEGAIDAASILKPKLARGELQTIGATTLDEYRKYI 332
Query: 187 EKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISD 246
EKD ALERRFQPV+V EPSV+ TI+ILKGLR+RYE HH++ TD ALV+AA L+ +YI+D
Sbjct: 333 EKDAALERRFQPVQVGEPSVEHTIEILKGLRDRYESHHRVSITDGALVAAATLADRYIND 392
Query: 247 RFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRD 306
RFLPDKAIDLIDEAG+R+R+R P + RE + + + KEK A+ QDFEKA LRD
Sbjct: 393 RFLPDKAIDLIDEAGARMRIRRMTAPPDLREFDDRIAEARKEKESAIDAQDFEKAARLRD 452
Query: 307 REMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKVSTDE 363
+E L ++ D+ K+ +GD+ VV EVD I ++ WTGIPV K++ +E
Sbjct: 453 KEKQL---VNERADREKQW-----RSGDM-DVVAEVDDEQIAEVLGNWTGIPVFKLTEEE 503
Query: 364 SDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELA 423
+ RLL+MEE LHKR+IGQ++AVKA+S+AIRR R GLK+P RP SFIF+GP+GVGK+EL+
Sbjct: 504 TTRLLRMEEELHKRIIGQEDAVKAVSKAIRRTRAGLKDPKRPSGSFIFAGPSGVGKTELS 563
Query: 424 KALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVL 483
KALA + FG ++A+I++DM EF +R T S+L G+PPGYVGY EGGQLTE VRR+P++VVL
Sbjct: 564 KALANFLFGEDDALIQIDMGEFHDRFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVVL 623
Query: 484 FDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFD 543
FDEIEKAH +++N +LQ+LEDGRLTD +GRTVDFKNT+LI TSN+G+S I K +GF
Sbjct: 624 FDEIEKAHSEIYNTLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGTSDISK-AVGLGF- 681
Query: 544 LDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFD 603
D+ S+Y R+K V +ELK++FRPEFLNR+D++IVF QLT+ E+ E+ D+M+ V
Sbjct: 682 TKGDDSTSNYERMKLKVNDELKKHFRPEFLNRIDDVIVFHQLTQQEIIEMVDLMIGRVEA 741
Query: 604 RLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSV 663
+LK KD+ L++TE+ + + G++P GARPLRR I R +ED ++EK+L EI G V
Sbjct: 742 QLKNKDMALELTEKAKNLLARRGFDPVLGARPLRRTIQREVEDQLSEKILFNEIHAGQIV 801
Query: 664 IVDVD 668
+VDV+
Sbjct: 802 LVDVE 806
>gi|119714730|ref|YP_921695.1| ATPase [Nocardioides sp. JS614]
gi|119535391|gb|ABL80008.1| ATPase AAA-2 domain protein [Nocardioides sp. JS614]
Length = 861
Score = 782 bits (2020), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 398/670 (59%), Positives = 512/670 (76%), Gaps = 14/670 (2%)
Query: 25 LEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLA 84
L+++G NLT+ A EGKLDPV+GR+ +IERV+QIL RRTKNNP LIGEPGVGKT I EGLA
Sbjct: 171 LDQFGRNLTQDAREGKLDPVIGREQEIERVMQILSRRTKNNPVLIGEPGVGKTTIVEGLA 230
Query: 85 QRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVH 144
Q I G+VP+T++ K++ TLD+G LVAG++YRG+FEERLKK+++EI+ +I+LFIDE+H
Sbjct: 231 QDIVKGNVPETLKDKQIYTLDLGALVAGSRYRGDFEERLKKVLKEIRTRGDIVLFIDEIH 290
Query: 145 TLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEP 204
TL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEYRK++EKD ALERRFQP++V EP
Sbjct: 291 TLVGAGAAEGAIDAASILKPMLARGELQTIGATTLDEYRKYLEKDAALERRFQPIQVAEP 350
Query: 205 SVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRV 264
S+ TI++LKGLR+RYE HH++ TDEALVSAA L+ +YISDRFLPDKAIDLIDEAGSR+
Sbjct: 351 SIAHTIEMLKGLRDRYEAHHRVTITDEALVSAATLADRYISDRFLPDKAIDLIDEAGSRL 410
Query: 265 RLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKE 324
R+R P + RE + ++ ++ + K A+ GQDFE A LRD E L+ K E
Sbjct: 411 RIRRMTAPADLREYDDKIGEVRQRKEAAIDGQDFEAAARLRDEE-------KQLILKKSE 463
Query: 325 MSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQ 381
K + AGD+ V EVD I +++ TGIP+ K+S +ES RLLKME+ LHKRVIGQ
Sbjct: 464 REK-QWRAGDMDE-VAEVDEELIAEVLAVATGIPIVKLSEEESTRLLKMEDELHKRVIGQ 521
Query: 382 DEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLD 441
+EAVKA+SRAIRR R GLK+P RP SFIF+GP+GVGK+ L+K LA + FG E+A+I+LD
Sbjct: 522 EEAVKALSRAIRRTRAGLKDPKRPGGSFIFAGPSGVGKTWLSKTLAEFLFGDEDALIQLD 581
Query: 442 MSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQI 501
MSEF E+HTVS+L GSPPGYVGY EGGQLTE VRR+P++VVLFDE+EKAHPD+FN +LQI
Sbjct: 582 MSEFGEKHTVSRLFGSPPGYVGYEEGGQLTEKVRRKPFSVVLFDEVEKAHPDIFNSLLQI 641
Query: 502 LEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVT 561
LE+GRLTDS+GR VDFKNT++IMT+N+G+ I K G +GF D SY R+KS V+
Sbjct: 642 LEEGRLTDSQGRVVDFKNTVIIMTTNLGTRDIAK-GINLGFQQSGDAA-GSYERMKSKVS 699
Query: 562 EELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRER 621
EELKQ+FRPEFLNR+DE+IVF L++ ++ + D M+ V R+K +D+ +++T+ +
Sbjct: 700 EELKQHFRPEFLNRVDEVIVFPPLSQEQIVHMVDNMIASVELRMKDRDMRIELTQNAKNL 759
Query: 622 VVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNGSSG 681
+ E G++P GARPLRR I R +ED +AEKML E+ G V+VDV+ +G S
Sbjct: 760 LAERGFDPVLGARPLRRTIQREIEDVLAEKMLYGEVGPGQIVLVDVEGEGPTATFTFSGQ 819
Query: 682 APESLADPLP 691
L D P
Sbjct: 820 KVGDLPDLPP 829
>gi|238019160|ref|ZP_04599586.1| hypothetical protein VEIDISOL_01023 [Veillonella dispar ATCC 17748]
gi|237863859|gb|EEP65149.1| hypothetical protein VEIDISOL_01023 [Veillonella dispar ATCC 17748]
Length = 815
Score = 782 bits (2019), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/661 (57%), Positives = 512/661 (77%), Gaps = 16/661 (2%)
Query: 15 GGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGV 74
G ++ + L ++ T+L + A++GK+DPV+GR +I+RV+QIL RRTKNNP LIGEPGV
Sbjct: 154 GANNNGDLGDLTDFATDLNESAKQGKIDPVIGRDTEIQRVIQILSRRTKNNPVLIGEPGV 213
Query: 75 GKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSD 134
GKTAIAEGLAQRI +G+VP+ + K++I+L +G ++AG KYRGEFEERLKK ++E++Q D
Sbjct: 214 GKTAIAEGLAQRIVTGNVPEILRNKRIISLSIGSMLAGAKYRGEFEERLKKAIDEVQQHD 273
Query: 135 EIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALER 194
++I+FIDE+HTL+GAGA EGA+DAANILKP+LARGE Q IGATTLDEY+KHIEKD ALER
Sbjct: 274 DMIIFIDEIHTLVGAGATEGAMDAANILKPALARGEFQVIGATTLDEYKKHIEKDAALER 333
Query: 195 RFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAI 254
RFQPV+V EP+ ++ ++ILKGLR+RYE HK + TDEAL +A LS +YI+DRFLPDKAI
Sbjct: 334 RFQPVQVGEPNEEDALEILKGLRDRYEAFHKAKITDEALKAAVTLSSRYITDRFLPDKAI 393
Query: 255 DLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQ 314
D++DEA S+VR++ + + LE L + KEK AV QDFEKA +LRD E L +
Sbjct: 394 DVVDEAASKVRMKVFSAAPDVKALEDRLNTVKKEKEAAVTSQDFEKAAKLRDEEQSLVKE 453
Query: 315 ISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETL 374
I D K ++K E+E VVTE DI +V+ WTGIPV K++ +ES LL +EE L
Sbjct: 454 I----DDKKSVAKEESEQ---KLVVTEDDIAAVVAQWTGIPVAKIADEESQTLLHLEEEL 506
Query: 375 HKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSE 434
HKRV+GQD+AV A+++A+RRAR GLK+P RPI SF+F GPTGVGK+ELA+ALA+ FG E
Sbjct: 507 HKRVVGQDDAVTAVAKAVRRARAGLKDPKRPIGSFLFLGPTGVGKTELARALASSLFGDE 566
Query: 435 EAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDV 494
AMIRLDMSE+ME+HTVS+L+G+PPGYVGY EGGQLT+AVRR+PY+V+L DE+EKAH D
Sbjct: 567 SAMIRLDMSEYMEKHTVSRLVGAPPGYVGYEEGGQLTDAVRRKPYSVILLDEVEKAHADF 626
Query: 495 FNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYN 554
FN++LQ+L+DGRLTDS+GRTVDF+NT++IMTSN+G+ + K +GF L + +SS N
Sbjct: 627 FNILLQVLDDGRLTDSQGRTVDFRNTVIIMTSNLGAKALHKNSSELGF-LAPKKSESSTN 685
Query: 555 RIKSL--------VTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLK 606
+ S+ V + +K++FRPEFLNR+DEMIVFR LT+ ++K I I++ +V RLK
Sbjct: 686 QSNSIDFKEAKKSVMDAVKRHFRPEFLNRIDEMIVFRPLTEEDLKHIVSILMSDVTKRLK 745
Query: 607 TKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVD 666
++++L++T + +V+EG + + GARPL+RAI RL+ED +++ +L ++ EG ++ VD
Sbjct: 746 ERELQLEITSEAMQLLVKEGSDFTMGARPLKRAIQRLIEDPVSDLILKGDVTEGKTIKVD 805
Query: 667 V 667
V
Sbjct: 806 V 806
>gi|385680704|ref|ZP_10054632.1| ATPase with chaperone activity, ATP-binding subunit [Amycolatopsis
sp. ATCC 39116]
Length = 850
Score = 782 bits (2019), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/689 (57%), Positives = 529/689 (76%), Gaps = 24/689 (3%)
Query: 3 GESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRT 62
G+ GAG G G+ + + L+++G NLT+ A EGKLDPV+GR +IERV+Q+L RRT
Sbjct: 147 GKEPAEAGAGRGEGTPSSSL-VLDQFGRNLTQSAREGKLDPVIGRGKEIERVMQVLSRRT 205
Query: 63 KNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEER 122
KNNP LIGEPGVGKTA+ EGLAQ I G+VP+T++ K++ TLD+G LVAG++YRG+FEER
Sbjct: 206 KNNPVLIGEPGVGKTAVVEGLAQNIVKGEVPETLKDKQLYTLDLGSLVAGSRYRGDFEER 265
Query: 123 LKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEY 182
LKK+++EIK +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTL+EY
Sbjct: 266 LKKVLKEIKTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIGATTLEEY 325
Query: 183 RKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQ 242
RK+IEKD ALERRFQP++V EPS++ TI+ILKGLR+RYE HH++ TD ALV+AA L+ +
Sbjct: 326 RKYIEKDAALERRFQPIQVGEPSLEHTIEILKGLRDRYEAHHRVSITDSALVAAATLADR 385
Query: 243 YISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAG 302
YI+DRFLPDKAIDLIDEAG+R+R+R P + RE ++++ ++ ++K A+ QDFE+A
Sbjct: 386 YINDRFLPDKAIDLIDEAGARMRIRRMTAPPDLREFDEKIAKVRRDKESAIDAQDFERAA 445
Query: 303 ELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKV 359
LRD E +L AQ S + K+ GD+ VV EVD I +++ WTGIPV K+
Sbjct: 446 RLRDEEKNLLAQKSEREKQWKD--------GDL-DVVAEVDDEQIAEVLANWTGIPVFKL 496
Query: 360 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 419
+ +E+ RLL+ME+ LHKR+IGQ++AVKA+S+AIRR R GLK+P RP SFIF+GP+GVGK
Sbjct: 497 TEEETTRLLRMEDELHKRIIGQEDAVKAVSQAIRRTRAGLKDPKRPSGSFIFAGPSGVGK 556
Query: 420 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 479
+EL+KALA + FG ++A+I++DM EF +R+T S+L G+PPGYVGY EGGQLTE VRR+P+
Sbjct: 557 TELSKALAEFLFGEDDALIQIDMGEFHDRYTASRLFGAPPGYVGYEEGGQLTEKVRRKPF 616
Query: 480 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 539
+VVLFDEIEKAH +++N +LQ+LEDGRLTD +GRTVDFKNT+LI TSN+G+S I K
Sbjct: 617 SVVLFDEIEKAHQEIYNTLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGTSDISK-TVS 675
Query: 540 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 599
+GF DE S Y ++K V EE+K++FRPEFLNR+D++IVF QLT+ ++ E+ D+M+
Sbjct: 676 LGFSSGNDE-GSRYEKMKQKVNEEMKKHFRPEFLNRIDDIIVFHQLTQEQIIEMVDLMVT 734
Query: 600 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 659
V +LK KD+ L++T++ + + + G++P GARPLRR I R +ED ++EK+L E++
Sbjct: 735 RVEKQLKAKDMALELTDKAKALLAKRGFDPVLGARPLRRTIQREIEDQLSEKILFGEVEA 794
Query: 660 GDSVIVDVDSDGNVTVLNGSSGAPESLAD 688
G VIVDV+ G SG PE D
Sbjct: 795 GQIVIVDVE---------GWSGNPEDRDD 814
>gi|404213401|ref|YP_006667576.1| ATPases with chaperone activity, ATP-binding subunit [Gordonia sp.
KTR9]
gi|403644200|gb|AFR47440.1| ATPases with chaperone activity, ATP-binding subunit [Gordonia sp.
KTR9]
Length = 846
Score = 782 bits (2019), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/666 (58%), Positives = 515/666 (77%), Gaps = 18/666 (2%)
Query: 11 AGVGGGSSGNKMPT----LEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNP 66
AG GG SS + P+ L+++G NLT A EGKLDPV+GR+ +IERV+Q+L RRTKNNP
Sbjct: 153 AGTGGRSSESGTPSTSLVLDQFGRNLTAAASEGKLDPVIGREKEIERVMQVLSRRTKNNP 212
Query: 67 CLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKL 126
LIGEPGVGKTA+ EGLAQ I +G VP+T++ K++ TLD+G LVAG++YRG+FEERLKK+
Sbjct: 213 VLIGEPGVGKTAVVEGLAQAIVNGKVPETLKDKQLYTLDLGSLVAGSRYRGDFEERLKKV 272
Query: 127 MEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHI 186
++EI +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEYRK+I
Sbjct: 273 LKEINTRGDIILFIDELHTLVGAGAAEGAIDAASILKPKLARGELQTIGATTLDEYRKYI 332
Query: 187 EKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISD 246
EKD ALERRFQPV+V EPSV+ TI+ILKGLR+RYE HH++ TD ALV+AA L+ +YI+D
Sbjct: 333 EKDAALERRFQPVQVGEPSVEHTIEILKGLRDRYESHHRVSITDGALVAAATLADRYIND 392
Query: 247 RFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRD 306
RFLPDKAIDLIDEAG+R+R+R P + RE + + KEK A+ QDFEKA LRD
Sbjct: 393 RFLPDKAIDLIDEAGARMRIRRMTAPPDLREFDDRIADARKEKESAIDAQDFEKAASLRD 452
Query: 307 REMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKVSTDE 363
+E L A+ + + + +GD+ VV EVD I ++ WTGIPV K++ +E
Sbjct: 453 KEKQLVAE--------RAEREKQWRSGDM-DVVAEVDDEQIAEVLGNWTGIPVFKLTEEE 503
Query: 364 SDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELA 423
+ RLL+ME+ LHKR+IGQ++AVKA+S+AIRR R GLK+P RP SFIF+GP+GVGK+EL+
Sbjct: 504 TTRLLRMEDELHKRIIGQEDAVKAVSKAIRRTRAGLKDPKRPSGSFIFAGPSGVGKTELS 563
Query: 424 KALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVL 483
KALA + FG ++A+I++DM EF +R T S+L G+PPGYVGY EGGQLTE VRR+P++VVL
Sbjct: 564 KALANFLFGEDDALIQIDMGEFHDRFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVVL 623
Query: 484 FDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFD 543
FDEIEKAH +++N +LQ+LEDGRLTD +GRTVDFKNT+LI TSN+G+S I K +GF
Sbjct: 624 FDEIEKAHSEIYNTLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGTSDISK-AVGMGFS 682
Query: 544 LDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFD 603
D S+Y+R+K V +ELK++FRPEFLNR+D+++VF QLT+ E+ ++ D+ML V
Sbjct: 683 -SSDGTKSNYDRMKQKVNDELKKHFRPEFLNRIDDIVVFHQLTREEIIQMVDLMLTRVEG 741
Query: 604 RLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSV 663
LK KD+ L+VT+R + + + G++P GARPLRR I R +ED ++EK+L +I G V
Sbjct: 742 ALKNKDMALEVTDRAKSLLAKRGFDPVLGARPLRRTIQREIEDQLSEKILFGDIAPGQIV 801
Query: 664 IVDVDS 669
+VDV++
Sbjct: 802 LVDVEN 807
>gi|420156532|ref|ZP_14663374.1| negative regulator of genetic competence ClpC/MecB [Clostridium sp.
MSTE9]
gi|394757462|gb|EJF40494.1| negative regulator of genetic competence ClpC/MecB [Clostridium sp.
MSTE9]
Length = 821
Score = 782 bits (2019), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/655 (60%), Positives = 509/655 (77%), Gaps = 9/655 (1%)
Query: 15 GGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGV 74
GG S K TL+++G +LT LA +G +DPV+GRQ +IERV+QIL RRTKNNPCLIGEPGV
Sbjct: 164 GGKSATK--TLDQFGRDLTALAAKGGIDPVIGRQTEIERVIQILSRRTKNNPCLIGEPGV 221
Query: 75 GKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSD 134
GKTA+AEGLA +IA G VP+ ++ K+VITLD+ +VAGTKYRG+FEER+K M+E++ +
Sbjct: 222 GKTAVAEGLALKIAEGQVPELLKNKRVITLDLTGMVAGTKYRGDFEERIKAAMDEVRSAG 281
Query: 135 EIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALER 194
IILFIDE+HT+IGAG+AEG+ DAANILKP+LARG+ Q IGATT++EYRK+IEKD ALER
Sbjct: 282 NIILFIDELHTIIGAGSAEGSTDAANILKPALARGDFQVIGATTINEYRKYIEKDAALER 341
Query: 195 RFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAI 254
RFQPV V EPS +E I+ILKGLR+RYE HHK++ TDEA+ +A +LS +YI+DRFLPDKAI
Sbjct: 342 RFQPVMVGEPSEEEAIEILKGLRDRYEAHHKVKITDEAIDAAVKLSSRYIADRFLPDKAI 401
Query: 255 DLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQ 314
DL+DEA SRVRLR P + +ELEK ++++ +EK A+ Q+FE+A ++RD E K +
Sbjct: 402 DLMDEASSRVRLRAFTAPTDLQELEKSIKELEQEKAAAINAQEFERAAKVRDEEKKAKEE 461
Query: 315 ISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETL 374
+ K K E G+V P DI ++VS WTGIPV +++ +ES+RLL +EETL
Sbjct: 462 LER--QKNLWTEKRSHEGGEVTP----EDIANVVSVWTGIPVVQLTEEESERLLHLEETL 515
Query: 375 HKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSE 434
H+R++GQ+EAV A+SRAIRR RVGLK+P RP+ SFIF GPTGVGK+EL KALA FG E
Sbjct: 516 HQRLVGQEEAVSAVSRAIRRGRVGLKDPKRPVGSFIFLGPTGVGKTELTKALAEAMFGDE 575
Query: 435 EAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDV 494
AMIRLDMSE+ME+HTVS+L+GSPPGYVGY EGGQLTEAVRR+PY+VVLFDEIEKAHPDV
Sbjct: 576 NAMIRLDMSEYMEKHTVSRLVGSPPGYVGYDEGGQLTEAVRRKPYSVVLFDEIEKAHPDV 635
Query: 495 FNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYN 554
FN++LQILEDGRLTD++GR VDFKNT++IMTSNVG+ +I + +GF + ++K S
Sbjct: 636 FNILLQILEDGRLTDAQGRKVDFKNTVIIMTSNVGARLITEKKGSLGFASEENQKLDS-E 694
Query: 555 RIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQV 614
++K LV ELK FRPEFLNR+D++IVF +LT +++EIA MLK + RL I +
Sbjct: 695 KVKELVLGELKSTFRPEFLNRVDDIIVFHKLTDEDIREIAGRMLKTLQKRLSEIGISAEF 754
Query: 615 TERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDS 669
E + +EG++P YGARPLRRAI LED ++E ML ++ G+ V+ D ++
Sbjct: 755 AEAAVAEIAKEGFDPIYGARPLRRAIQTKLEDRLSELMLEGKVHAGNRVVCDFEN 809
>gi|358457648|ref|ZP_09167865.1| ATPase AAA-2 domain protein [Frankia sp. CN3]
gi|357079193|gb|EHI88635.1| ATPase AAA-2 domain protein [Frankia sp. CN3]
Length = 836
Score = 782 bits (2019), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/691 (58%), Positives = 526/691 (76%), Gaps = 22/691 (3%)
Query: 11 AGVGGGSSGNKMPTL--EEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCL 68
A GG S G +L +++G NLT A E KLDPV+GR+ +IERV+Q+L RRTKNNP L
Sbjct: 152 ATAGGPSEGTPSTSLVLDQFGRNLTAAAREAKLDPVIGREKEIERVMQVLSRRTKNNPVL 211
Query: 69 IGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLME 128
IGEPGVGKTA+ EGLAQ I G+VP+T++ K++ TLD+G LVAG++YRG+FEERLKK+++
Sbjct: 212 IGEPGVGKTAVVEGLAQAIVKGEVPETLKDKQLYTLDLGALVAGSRYRGDFEERLKKVLK 271
Query: 129 EIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEK 188
EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEYRKH+EK
Sbjct: 272 EIRTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIGATTLDEYRKHLEK 331
Query: 189 DPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRF 248
D ALERRFQP++V EPSV TI+ILKGLR+RYE HH++ TD ALV+AA L+ +YISDRF
Sbjct: 332 DAALERRFQPIQVAEPSVAHTIEILKGLRDRYEAHHRVSITDAALVAAASLADRYISDRF 391
Query: 249 LPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDRE 308
LPDKAIDLIDEAGSR+R+R P + RE ++ + + ++K A+ QDFEKA LRD+E
Sbjct: 392 LPDKAIDLIDEAGSRMRIRRMTAPPDLREFDERIANVRRDKESAIDAQDFEKAASLRDKE 451
Query: 309 MDLKAQISALVDKGKEMSKAETEAGDVGPVVTEV---DIQHIVSAWTGIPVEKVSTDESD 365
L A+ K + E +AGD+ VV EV +I +++ WTGIPV K++ +E+
Sbjct: 452 KTLLAE--------KAKREKEWKAGDMD-VVAEVGDEEIAEVLAIWTGIPVFKLTEEETA 502
Query: 366 RLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKA 425
RLL+ME+ LH+RVIGQ++A+KA+S+AIRR R GLK+P RP SFIF+GP+GVGK+EL+K
Sbjct: 503 RLLRMEDELHRRVIGQEQAIKAVSQAIRRTRAGLKDPKRPGGSFIFAGPSGVGKTELSKT 562
Query: 426 LAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFD 485
LA + FG E+A+I+LDMSE+ME+HTVS+L+GSPPGYVGY EGGQLTE VRR+P++VVLFD
Sbjct: 563 LAEFLFGDEDALIQLDMSEYMEKHTVSRLVGSPPGYVGYEEGGQLTERVRRKPFSVVLFD 622
Query: 486 EIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLD 545
E+EKAHPDVFN +LQILEDGRLTDS+GR VDFKNT+LIMTSN+G+ I KG IGF
Sbjct: 623 EVEKAHPDVFNTLLQILEDGRLTDSQGRLVDFKNTVLIMTSNLGTRDISKGP-GIGFATG 681
Query: 546 YDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRL 605
D Y R+K+ V +ELKQ+FRPEFLNR+D++IVF QL+K E+ +I D+ML V +L
Sbjct: 682 QGAVD--YERMKAKVQDELKQHFRPEFLNRIDDIIVFHQLSKDEIIQIVDLMLARVDTQL 739
Query: 606 KTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIV 665
K KD+ L++T + + GY+P GARPLRR I R +ED ++EK+L +K G+ VI
Sbjct: 740 KNKDMALELTPAAKTLLAIRGYDPVLGARPLRRTIQREIEDVLSEKILYGTLKPGEIVIG 799
Query: 666 DVDSDGNVT----VLNGSSGAPESLADPLPV 692
DV+ D V G + P S+ D P+
Sbjct: 800 DVEGDPESEDAKFVFRGET-KPSSVPDTPPI 829
>gi|269798082|ref|YP_003311982.1| ATPase AAA [Veillonella parvula DSM 2008]
gi|269094711|gb|ACZ24702.1| ATPase AAA-2 domain protein [Veillonella parvula DSM 2008]
Length = 815
Score = 782 bits (2019), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 384/683 (56%), Positives = 520/683 (76%), Gaps = 15/683 (2%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
++G + + G G +S N + L ++ T+L + A++GK+DPV+GR +I+RV+QIL R
Sbjct: 140 ILGSNKGSNNGGQEGINSNNDLGELSDFATDLNESAKQGKIDPVIGRDTEIQRVIQILSR 199
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNP LIGEPGVGKTAIAEGLAQRI +G+VP+ + K++I+L +G ++AG KYRGEFE
Sbjct: 200 RTKNNPVLIGEPGVGKTAIAEGLAQRIVTGNVPEILRNKRIISLSIGSMLAGAKYRGEFE 259
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
ERLKK ++E++Q D++I+FIDE+HTL+GAGA EGA+DAANILKP+LARGE Q IGATTLD
Sbjct: 260 ERLKKAIDEVQQHDDMIIFIDEIHTLVGAGATEGAMDAANILKPALARGEFQVIGATTLD 319
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EY+KHIEKD ALERRFQPV+V EP+ ++ ++ILKGLR+RYE HK + TDEAL +A LS
Sbjct: 320 EYKKHIEKDAALERRFQPVQVGEPNEEDALEILKGLRDRYEAFHKAKITDEALTAAVSLS 379
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
+YI+DRFLPDKAID++DEA S+VR++ + + LE L + KEK AV QDFEK
Sbjct: 380 SRYITDRFLPDKAIDVVDEAASKVRMKVFSAAPDVKALEDRLNTVKKEKEAAVTSQDFEK 439
Query: 301 AGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVS 360
A +LRD E L +I DK K ++K E D +VTE DI +V+ WTGIPV K++
Sbjct: 440 AAKLRDEEQSLVKEIG---DK-KSIAK---EKSDQKLIVTEEDIAAVVAQWTGIPVAKIA 492
Query: 361 TDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 420
+ES LL +EE LHKRV+GQDEAV A+++A+RRAR GLK+P RPI SF+F GPTGVGK+
Sbjct: 493 EEESATLLHLEEELHKRVVGQDEAVTAVAKAVRRARAGLKDPKRPIGSFLFLGPTGVGKT 552
Query: 421 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 480
ELA+ALA+ FG E AMIRLDMSE+ME+HTVS+L+G+PPGYVGY EGGQLT+AVRR+PY+
Sbjct: 553 ELARALASSLFGDESAMIRLDMSEYMEKHTVSRLVGAPPGYVGYEEGGQLTDAVRRKPYS 612
Query: 481 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI 540
V+L DE+EKAH D FN++LQ+L+DGRLTDS+GRTVDF+NT++IMTSN+G+ + K +
Sbjct: 613 VILLDEVEKAHADFFNILLQVLDDGRLTDSQGRTVDFRNTVIIMTSNLGAKALHKNSPEL 672
Query: 541 GF------DLDYDE-KDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEI 593
GF D + DE K + K V + +K+YFRPEFLNR+DEMIVF LT+ ++KEI
Sbjct: 673 GFLAAKKADSNVDENKGIDFKEAKKSVMDAVKRYFRPEFLNRIDEMIVFHPLTEEDLKEI 732
Query: 594 ADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKML 653
I++ +V RL+ +D++L+++ + +V+EG + + GARPL+RAI RL+ED +++ +L
Sbjct: 733 VTILMSDVTKRLEERDLQLEISPEAMKLLVKEGSDFTMGARPLKRAIQRLIEDPVSDLIL 792
Query: 654 AREIKEGDSVIVDV-DSDGNVTV 675
+ KEG + D D+D V++
Sbjct: 793 KGDAKEGKIIKADAKDNDLVVSI 815
>gi|377569546|ref|ZP_09798707.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Gordonia
terrae NBRC 100016]
gi|377533283|dbj|GAB43872.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Gordonia
terrae NBRC 100016]
Length = 846
Score = 781 bits (2018), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/666 (58%), Positives = 514/666 (77%), Gaps = 18/666 (2%)
Query: 11 AGVGGGSSGNKMPT----LEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNP 66
AG GG SS + P+ L+++G NLT A EGKLDPV+GR+ +IERV+Q+L RRTKNNP
Sbjct: 153 AGTGGRSSESGTPSTSLVLDQFGRNLTAAASEGKLDPVIGREKEIERVMQVLSRRTKNNP 212
Query: 67 CLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKL 126
LIGEPGVGKTA+ EGLAQ I +G VP+T++ K++ TLD+G LVAG++YRG+FEERLKK+
Sbjct: 213 VLIGEPGVGKTAVVEGLAQAIVNGKVPETLKDKQLYTLDLGSLVAGSRYRGDFEERLKKV 272
Query: 127 MEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHI 186
++EI +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEYRK+I
Sbjct: 273 LKEINTRGDIILFIDELHTLVGAGAAEGAIDAASILKPKLARGELQTIGATTLDEYRKYI 332
Query: 187 EKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISD 246
EKD ALERRFQPV+V EPSV+ TI+ILKGLR+RYE HH++ TD ALV+AA L+ +YI+D
Sbjct: 333 EKDAALERRFQPVQVGEPSVEHTIEILKGLRDRYESHHRVSITDGALVAAATLADRYIND 392
Query: 247 RFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRD 306
RFLPDKAIDLIDEAG+R+R+R P + RE + + KEK A+ QDFEKA LRD
Sbjct: 393 RFLPDKAIDLIDEAGARMRIRRMTAPPDLREFDDRIADARKEKESAIDAQDFEKAASLRD 452
Query: 307 REMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKVSTDE 363
+E L A+ + + + +GD+ VV EVD I ++ WTGIPV K++ +E
Sbjct: 453 KEKQLVAE--------RAEREKQWRSGDM-DVVAEVDDEQIAEVLGNWTGIPVFKLTEEE 503
Query: 364 SDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELA 423
+ RLL+ME+ LHKR+IGQ++AVKA+S+AIRR R GLK+P RP SFIF+GP+GVGK+EL+
Sbjct: 504 TTRLLRMEDELHKRIIGQEDAVKAVSKAIRRTRAGLKDPKRPSGSFIFAGPSGVGKTELS 563
Query: 424 KALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVL 483
KALA + FG ++A+I++DM EF +R T S+L G+PPGYVGY EGGQLTE VRR+P++VVL
Sbjct: 564 KALANFLFGEDDALIQIDMGEFHDRFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVVL 623
Query: 484 FDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFD 543
FDEIEKAH +++N +LQ+LEDGRLTD +GRTVDFKNT+LI TSN+G+S I K +GF
Sbjct: 624 FDEIEKAHSEIYNTLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGTSDISK-AVGMGFS 682
Query: 544 LDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFD 603
D S+Y R+K V +ELK++FRPEFLNR+D+++VF QLT+ E+ ++ D+ML V
Sbjct: 683 -SSDGTQSNYERMKQKVNDELKKHFRPEFLNRIDDIVVFHQLTREEIIQMVDLMLTRVEG 741
Query: 604 RLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSV 663
LK KD+ L+VT+R + + + G++P GARPLRR I R +ED ++EK+L +I G V
Sbjct: 742 ALKNKDMALEVTDRAKSLLAKRGFDPVLGARPLRRTIQREIEDQLSEKILFGDIAPGQIV 801
Query: 664 IVDVDS 669
+VDV++
Sbjct: 802 LVDVEN 807
>gi|385800597|ref|YP_005837001.1| ATPase [Halanaerobium praevalens DSM 2228]
gi|309389961|gb|ADO77841.1| ATPase AAA-2 domain protein [Halanaerobium praevalens DSM 2228]
Length = 806
Score = 781 bits (2018), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/649 (60%), Positives = 499/649 (76%), Gaps = 8/649 (1%)
Query: 19 GNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTA 78
N L+EY +LT++A+E KLDPVVGR +I RV+Q+L RRTKNNP LIGEPGVGKTA
Sbjct: 156 NNNTKNLDEYSRDLTEMAKENKLDPVVGRDEEINRVIQVLSRRTKNNPVLIGEPGVGKTA 215
Query: 79 IAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIIL 138
I EGLAQRI S VP+ + K+V++LD+ LVAG+KYRGEFE+RLK +M EI ++ IIL
Sbjct: 216 IIEGLAQRIISESVPELLLNKRVVSLDLSSLVAGSKYRGEFEKRLKSVMNEIIENGNIIL 275
Query: 139 FIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQP 198
FIDE+HTL+GAGAAEGAIDAANILKP+LARGELQ IGATTLDEYRK+IEKD ALERRFQ
Sbjct: 276 FIDEMHTLVGAGAAEGAIDAANILKPALARGELQAIGATTLDEYRKYIEKDAALERRFQS 335
Query: 199 VKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLID 258
V V E S++E I ILKGLR+ YE HHK++ TD+A+ A LS +YISDRFLPDKAIDLID
Sbjct: 336 VLVEENSIEEAIDILKGLRDPYEAHHKVKITDQAIKDAVLLSNRYISDRFLPDKAIDLID 395
Query: 259 EAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISAL 318
EA S+VRL + P E ++L K+L ++ KEK A++ Q+FEKA +RD+E + ++ L
Sbjct: 396 EAASKVRLSKSTRPPEFKQLRKKLEEVEKEKEAAIKNQEFEKAARMRDQEKEFSQELEEL 455
Query: 319 VDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRV 378
+ E E G VV DI IVS+WTGIPV K+ E+++LL++E LH+RV
Sbjct: 456 ------KNSWENEKGKADAVVISEDIAEIVSSWTGIPVTKLEEAETEKLLRLESELHERV 509
Query: 379 IGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMI 438
IGQDEA+ A+S A+RRAR GLK P RPI SFIF GPTGVGK+ELAK LA F EEAMI
Sbjct: 510 IGQDEAINAVSEAVRRARAGLKAPKRPIGSFIFLGPTGVGKTELAKTLAETMFNDEEAMI 569
Query: 439 RLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMM 498
R+DMSE+ME+H+VS+L+GSPPGYVG+ EGGQLTE VRRRPY+V+LFDEIEKAHPDVFN++
Sbjct: 570 RVDMSEYMEKHSVSRLVGSPPGYVGHDEGGQLTEPVRRRPYSVILFDEIEKAHPDVFNIL 629
Query: 499 LQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKS 558
LQILEDG LTDS GR VDFKNT+++MTSNVG+ IEK ++GF + DEKD +Y +K
Sbjct: 630 LQILEDGVLTDSHGRKVDFKNTIVVMTSNVGADFIEKQS-QLGFKAENDEKD-NYENMKD 687
Query: 559 LVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERF 618
V +L++ F+PEFLNRLDE IVF L + +K+I D+ML E+ +RL K+IEL++TE+
Sbjct: 688 NVMSKLRKTFKPEFLNRLDETIVFHALNQEHIKKIVDLMLDELKERLAEKEIELEMTEKA 747
Query: 619 RERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDV 667
+E++ E+GY+ +GARPLRR I R +E+++A K+L +E + V +DV
Sbjct: 748 KEKLAEDGYDSEFGARPLRREIQRQIENTLAVKILDKEFENNKKVTIDV 796
>gi|320095436|ref|ZP_08027113.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Actinomyces
sp. oral taxon 178 str. F0338]
gi|319977629|gb|EFW09295.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Actinomyces
sp. oral taxon 178 str. F0338]
Length = 822
Score = 781 bits (2018), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/647 (59%), Positives = 514/647 (79%), Gaps = 8/647 (1%)
Query: 25 LEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLA 84
LE++G NLT+ A E KLDPV+GR+ ++ERV+Q+L RRTKNNP LIGEPGVGKTA+ EGLA
Sbjct: 174 LEQFGRNLTQAARENKLDPVIGRRTEMERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLA 233
Query: 85 QRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVH 144
Q I GDVP+TI+ +++ +LDMG LVAG++YRG+FEERLKK+++EI+ +IILFIDE+H
Sbjct: 234 QAIVHGDVPETIKDRQIYSLDMGSLVAGSRYRGDFEERLKKVLKEIRTRGDIILFIDEIH 293
Query: 145 TLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEP 204
TL+GAGAAEG+IDAA +LKP LARGELQ IGATT DEYRK+IEKD ALERRFQPVKV EP
Sbjct: 294 TLVGAGAAEGSIDAAQMLKPMLARGELQTIGATTNDEYRKYIEKDAALERRFQPVKVDEP 353
Query: 205 SVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRV 264
SV++TI+ILKGLR+RYE HH++ TDEA+ SAA+L+ +Y+SDRFLPDKAIDL+DEAG+R+
Sbjct: 354 SVEDTIEILKGLRDRYEAHHRVIITDEAIKSAAELADRYVSDRFLPDKAIDLVDEAGARL 413
Query: 265 RLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKE 324
R+R P E REL++ + ++ + K A+ QDFEKA LRD+E L + K KE
Sbjct: 414 RIRRMTAPPELRELDERISELRRNKESAIDDQDFEKAAALRDQESKLGEE-----RKAKE 468
Query: 325 MSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEA 384
+ E+ ++ VT+ +I +++ TGIPV +++ E+ +LL+ME+ LHKRVIGQDEA
Sbjct: 469 AAWKGGESDEIAE-VTDHEIAEVLAMSTGIPVVRLTQTETSKLLRMEDELHKRVIGQDEA 527
Query: 385 VKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSE 444
VKA++++IRR R GLK+PNRP SFIF+GPTGVGK+ELAKALA + FG E+A+++LDMSE
Sbjct: 528 VKALAQSIRRTRSGLKDPNRPGGSFIFAGPTGVGKTELAKALAEFLFGDEDALVQLDMSE 587
Query: 445 FMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILED 504
F E+HT S+L G+PPGYVGY EGGQLTE VRR+P++VVLFDE+EKAHPD+FN +LQILE+
Sbjct: 588 FSEKHTASRLFGAPPGYVGYDEGGQLTEKVRRKPFSVVLFDEVEKAHPDIFNSLLQILEE 647
Query: 505 GRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEEL 564
GRLTDS+GR VDFKNT++IMT+N+G+ I K G GF + + Y R+KS V+EEL
Sbjct: 648 GRLTDSQGRKVDFKNTVIIMTTNLGTRDINK-GVLTGFQ-SSEHQTHDYARMKSKVSEEL 705
Query: 565 KQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVE 624
KQ+FRPEFLNR+D+ IVF L K E+K+I D+M+ ++ R++ +D+ LQ+++ RE + +
Sbjct: 706 KQHFRPEFLNRVDDTIVFPPLQKDEIKQIVDLMIAKLAKRMEAQDMHLQLSDGARELLAD 765
Query: 625 EGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDG 671
G++P GARPLRRAI R +EDS++E++L EI+ G V V V+ +G
Sbjct: 766 LGFDPVLGARPLRRAIQREIEDSLSERILFGEIQPGQVVTVGVEGEG 812
>gi|294793817|ref|ZP_06758954.1| negative regulator of genetic competence ClpC/MecB [Veillonella sp.
3_1_44]
gi|294455387|gb|EFG23759.1| negative regulator of genetic competence ClpC/MecB [Veillonella sp.
3_1_44]
Length = 815
Score = 781 bits (2018), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 384/683 (56%), Positives = 519/683 (75%), Gaps = 15/683 (2%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
++G + + G G +S N + L ++ T+L + A++GK+DPV+GR +I+RV+QIL R
Sbjct: 140 ILGSNKGSNNGGQEGINSNNDLGELSDFATDLNESAKQGKIDPVIGRDTEIQRVIQILSR 199
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNP LIGEPGVGKTAIAEGLAQRI +G+VP+ + K++I+L +G ++AG KYRGEFE
Sbjct: 200 RTKNNPVLIGEPGVGKTAIAEGLAQRIVTGNVPEILRNKRIISLSIGSMLAGAKYRGEFE 259
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
ERLKK ++E++Q D++I+FIDE+HTL+GAGA EGA+DAANILKP+LARGE Q IGATTLD
Sbjct: 260 ERLKKAIDEVQQHDDMIIFIDEIHTLVGAGATEGAMDAANILKPALARGEFQVIGATTLD 319
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EY+KHIEKD ALERRFQPV+V EP+ ++ ++ILKGLR+RYE HK + TDEAL +A LS
Sbjct: 320 EYKKHIEKDAALERRFQPVQVGEPNEEDALEILKGLRDRYEAFHKAKITDEALTAAVSLS 379
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
+YI+DRFLPDKAID++DEA S+VR++ + + LE L + KEK AV QDFEK
Sbjct: 380 SRYITDRFLPDKAIDVVDEAASKVRMKVFSAAPDVKALEDRLNTVKKEKEAAVTSQDFEK 439
Query: 301 AGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVS 360
A +LRD E L +I DK K ++K E D +VTE DI +V+ WTGIPV K++
Sbjct: 440 AAKLRDEEQSLLKEIG---DK-KSIAK---EKSDQKLIVTEEDIAAVVAQWTGIPVAKIA 492
Query: 361 TDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 420
+ES LL +EE LHKRV+GQDEAV A+++A+RRAR GLK+P RPI SF+F GPTGVGK+
Sbjct: 493 EEESATLLHLEEELHKRVVGQDEAVTAVAKAVRRARAGLKDPKRPIGSFLFLGPTGVGKT 552
Query: 421 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 480
ELA+ALA+ FG E AMIRLDMSE+ME+HTVS+L+G+PPGYVGY EGGQLT+AVRR+PY+
Sbjct: 553 ELARALASSLFGDESAMIRLDMSEYMEKHTVSRLVGAPPGYVGYEEGGQLTDAVRRKPYS 612
Query: 481 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI 540
V+L DE+EKAH D FN++LQ+L+DGRLTDS+GRTVDF+NT++IMTSN+G+ + K +
Sbjct: 613 VILLDEVEKAHADFFNILLQVLDDGRLTDSQGRTVDFRNTVIIMTSNLGAKALHKNSPEL 672
Query: 541 GF------DLDYDE-KDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEI 593
GF D + DE K+ + K V + +K++FRPEFLNR+DEMIVF LT ++KEI
Sbjct: 673 GFLAAKKSDFNVDENKEIEFKEAKKSVMDAVKRHFRPEFLNRIDEMIVFHPLTGEDLKEI 732
Query: 594 ADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKML 653
I++ +V RL +D++L++T + +V+EG + + GARPL+RAI RL+ED +++ +L
Sbjct: 733 VTILMSDVTKRLGERDLQLEITPEAMKLLVKEGSDFTMGARPLKRAIQRLIEDPVSDLIL 792
Query: 654 AREIKEGDSVIVDV-DSDGNVTV 675
+ KEG + D D+D V++
Sbjct: 793 KGDAKEGKIIKADAKDNDLVVSI 815
>gi|302876561|ref|YP_003845194.1| ATPase AAA-2 domain-containing protein [Clostridium cellulovorans
743B]
gi|307687233|ref|ZP_07629679.1| ATPase AAA-2 domain-containing protein [Clostridium cellulovorans
743B]
gi|302579418|gb|ADL53430.1| ATPase AAA-2 domain protein [Clostridium cellulovorans 743B]
Length = 812
Score = 781 bits (2017), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/648 (59%), Positives = 517/648 (79%), Gaps = 6/648 (0%)
Query: 23 PTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEG 82
PTL+++G +LTK+A+E KLDPV+GR + ERV++IL RRTKNNPCLIGEPGVGKTAIAEG
Sbjct: 164 PTLDQFGRDLTKMAKEAKLDPVIGRDKETERVLEILSRRTKNNPCLIGEPGVGKTAIAEG 223
Query: 83 LAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDE 142
LAQ+I G++P+ ++ K+V+TLD+ L+AG+KYRGEFEERLKK+M EI ++ ++LFIDE
Sbjct: 224 LAQKIVEGNIPEILKDKRVVTLDLSSLIAGSKYRGEFEERLKKVMAEITKAGNVLLFIDE 283
Query: 143 VHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVP 202
+HT++GAG AEGAIDA+NILKPSLARGE+QCIGATTLDEYRK+IEKD ALERRFQPVKV
Sbjct: 284 IHTIVGAGGAEGAIDASNILKPSLARGEIQCIGATTLDEYRKYIEKDSALERRFQPVKVG 343
Query: 203 EPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGS 262
EP+ +E + ILKGLR++YE HH+++ TD A+ +A LS +YI+DR+LPDKAIDLIDEAG+
Sbjct: 344 EPTKEEALLILKGLRDKYEAHHRVKITDAAIDAAVNLSDRYITDRYLPDKAIDLIDEAGA 403
Query: 263 RVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKG 322
RVR+++ P + + LE+EL +I+KEK +A+ QDFEKA LRD E + K ++ L
Sbjct: 404 RVRIQNLTAPPDLKSLEEELEKISKEKADAIGVQDFEKAARLRDTEKETKERLEKLSKDW 463
Query: 323 KEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQD 382
K + + TE +VG E +I +VS WT +PVEK++ ES+RLLK+EE LH RVIGQ+
Sbjct: 464 KN-NNSRTENQEVG----EEEIATVVSKWTNVPVEKLTEKESERLLKLEEILHNRVIGQE 518
Query: 383 EAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDM 442
EAV +++RA+RRARVGLK+P RPI SFIF GPTGVGK+EL KALA F +E+ MIR+DM
Sbjct: 519 EAVISVARAVRRARVGLKDPKRPIGSFIFLGPTGVGKTELTKALAEAMFDNEKNMIRVDM 578
Query: 443 SEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQIL 502
SE+ME+H+V++LIGSPPGYVGY EGGQLTE VRR PY+V+LFDEIEKAHPDVFN++LQIL
Sbjct: 579 SEYMEKHSVARLIGSPPGYVGYDEGGQLTEKVRRNPYSVILFDEIEKAHPDVFNVLLQIL 638
Query: 503 EDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTE 562
EDG LTD KG+ V+FKNT++IMTSNVG+ I+K + +GF+ D +S Y ++K + +
Sbjct: 639 EDGILTDGKGKVVNFKNTIIIMTSNVGAHSIKK-QKSLGFNTAGDINNSEYEKMKDNIMD 697
Query: 563 ELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERV 622
ELKQ F+PEFLNR+D++IVF +L + ++ EI +MLK V DRLK ++I ++ E + +
Sbjct: 698 ELKQSFKPEFLNRIDDIIVFHKLEEKDLSEIVKLMLKNVSDRLKEQEIFIEFDEEAEKLL 757
Query: 623 VEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSD 670
+EG++ +YGARPLRR I + +ED ++E++L +K+ D VIV V+ +
Sbjct: 758 AKEGFDTTYGARPLRRTITKTVEDKLSEEILKGNVKKSDRVIVTVEDN 805
>gi|262200860|ref|YP_003272068.1| ATPase AAA [Gordonia bronchialis DSM 43247]
gi|262084207|gb|ACY20175.1| ATPase AAA-2 domain protein [Gordonia bronchialis DSM 43247]
Length = 848
Score = 781 bits (2017), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/665 (58%), Positives = 516/665 (77%), Gaps = 18/665 (2%)
Query: 11 AGVGGGSSGNKMPT----LEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNP 66
AG GG SS + P+ L+++G NLT A EGKLDPV+GR+ +IERV+Q+L RRTKNNP
Sbjct: 153 AGTGGRSSESGTPSTSLVLDQFGRNLTAAAGEGKLDPVIGREKEIERVMQVLSRRTKNNP 212
Query: 67 CLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKL 126
LIGEPGVGKTA+ EGLAQ I +G VP+T++ K++ TLD+G LVAG++YRG+FEERLKK+
Sbjct: 213 VLIGEPGVGKTAVVEGLAQAIVNGQVPETLKDKQLYTLDLGSLVAGSRYRGDFEERLKKV 272
Query: 127 MEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHI 186
++EI +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEYRK+I
Sbjct: 273 LKEINTRGDIILFIDELHTLVGAGAAEGAIDAASILKPKLARGELQTIGATTLDEYRKYI 332
Query: 187 EKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISD 246
EKD ALERRFQPV+V EPSV+ TI+ILKGLR+RYE HH++ TD ALV+AA L+ +YI+D
Sbjct: 333 EKDAALERRFQPVQVGEPSVEHTIEILKGLRDRYESHHRVSITDGALVAAATLADRYIND 392
Query: 247 RFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRD 306
RFLPDKAIDLIDEAG+R+R+R P + RE ++ + KEK A+ QDFEKA LRD
Sbjct: 393 RFLPDKAIDLIDEAGARMRIRRMTAPPDLREFDERIADARKEKESAIDAQDFEKAASLRD 452
Query: 307 REMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKVSTDE 363
+E L A+ + + + +GD+ VV EVD I ++ WTGIPV K++ +E
Sbjct: 453 KEKQLVAE--------RAEREKQWRSGDM-DVVAEVDDEQIAEVLGNWTGIPVFKLTEEE 503
Query: 364 SDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELA 423
+ RLL+ME+ LHKR+IGQ++AVKA+S+AIRR R GLK+P RP SFIF+GP+GVGK+EL+
Sbjct: 504 TTRLLRMEDELHKRIIGQEDAVKAVSKAIRRTRAGLKDPKRPSGSFIFAGPSGVGKTELS 563
Query: 424 KALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVL 483
KALA + FG ++A+I++DM EF +R T S+L G+PPGYVGY EGGQLTE VRR+P++VVL
Sbjct: 564 KALANFLFGEDDALIQIDMGEFHDRFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVVL 623
Query: 484 FDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFD 543
FDEIEKAH +++N +LQ+LEDGRLTD +GRTVDFKNT+LI TSN+G+S I K +GF
Sbjct: 624 FDEIEKAHSEIYNTLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGTSDISK-AVGLGF- 681
Query: 544 LDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFD 603
D+ S+Y R+K V +ELK++FRPEFLNR+D++IVF QLT+ E+ ++ D+M+ V
Sbjct: 682 TKGDDSQSNYERMKLKVNDELKKHFRPEFLNRIDDVIVFHQLTRDEIIQMVDLMINRVET 741
Query: 604 RLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSV 663
+LK KD+ L++T+R + + + G++P GARPLRR I R +ED ++EK+L EI G V
Sbjct: 742 QLKNKDMALELTDRAKALLAKRGFDPVLGARPLRRTIQREIEDQLSEKILFNEIGAGQIV 801
Query: 664 IVDVD 668
+VDV+
Sbjct: 802 LVDVE 806
>gi|254386473|ref|ZP_05001776.1| clp-family ATP-binding protease [Streptomyces sp. Mg1]
gi|194345321|gb|EDX26287.1| clp-family ATP-binding protease [Streptomyces sp. Mg1]
Length = 841
Score = 781 bits (2017), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/655 (59%), Positives = 511/655 (78%), Gaps = 16/655 (2%)
Query: 11 AGVGGGSSGNKMPTL--EEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCL 68
A GG + G +L +++G NLT+ A E KLDPV+GR+ +IERV+Q+L RRTKNNP L
Sbjct: 153 ATAGGPAEGTPSTSLVLDQFGRNLTQAARESKLDPVIGREKEIERVMQVLSRRTKNNPVL 212
Query: 69 IGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLME 128
IGEPGVGKTA+ EGLAQ I G+VP+T++ K + TLD+G LVAG++YRG+FEERLKK+++
Sbjct: 213 IGEPGVGKTAVVEGLAQAIVKGEVPETLKDKHLYTLDLGALVAGSRYRGDFEERLKKVLK 272
Query: 129 EIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEK 188
EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEYRKH+EK
Sbjct: 273 EIRTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIGATTLDEYRKHLEK 332
Query: 189 DPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRF 248
D ALERRFQP++V EPS+ TI+ILKGLR+RYE HH++ TDEALV AA L+ +YISDRF
Sbjct: 333 DAALERRFQPIQVAEPSLPHTIEILKGLRDRYEAHHRVSITDEALVQAATLADRYISDRF 392
Query: 249 LPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDRE 308
LPDKAIDLIDEAGSR+R+R P + RE ++++ + ++K A+ QDFEKA LRD E
Sbjct: 393 LPDKAIDLIDEAGSRMRIRRMTAPPDLREFDEKIANVRRDKESAIDSQDFEKAASLRDSE 452
Query: 309 MDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKVSTDESD 365
L A K + E +AGD+ VV EVD I +++ TGIPV K++ +ES
Sbjct: 453 KQLLA--------AKAKREKEWKAGDM-DVVAEVDGELIAEVLATATGIPVFKLTEEESS 503
Query: 366 RLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKA 425
RLL+ME+ LH+RVIGQ +A+KA+S+AIRR R GLK+P RP SFIF+GP+GVGK+EL+K
Sbjct: 504 RLLRMEDELHRRVIGQKDAIKALSQAIRRTRAGLKDPKRPGGSFIFAGPSGVGKTELSKT 563
Query: 426 LAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFD 485
LA + FG E+A+I LDMSEF E+HTVS+L GSPPGYVGY EGGQLTE VRR+P++VVLFD
Sbjct: 564 LAEFLFGDEDALISLDMSEFSEKHTVSRLFGSPPGYVGYEEGGQLTEKVRRKPFSVVLFD 623
Query: 486 EIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLD 545
E+EKAHPD+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N+G+ I K G +GF
Sbjct: 624 EVEKAHPDIFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNLGTRDISK-GFNLGFAAQ 682
Query: 546 YDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRL 605
D K + Y+R+K+ V EELKQ+FRPEFLNR+D+ +VF QLT+ ++ +I D+M+ +V +RL
Sbjct: 683 GDTK-TGYDRMKAKVNEELKQHFRPEFLNRVDDTVVFHQLTQEDIIQIVDLMIAKVDERL 741
Query: 606 KTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEG 660
K +D+ ++++ ++ + + GY+P GARPLRR I R +ED ++EK+L E++ G
Sbjct: 742 KDRDMGIELSGEAKQLLAKRGYDPIMGARPLRRTIQREIEDMLSEKILFGELRPG 796
>gi|284989236|ref|YP_003407790.1| ATPase AAA-2 domain-containing protein [Geodermatophilus obscurus
DSM 43160]
gi|284062481|gb|ADB73419.1| ATPase AAA-2 domain protein [Geodermatophilus obscurus DSM 43160]
Length = 841
Score = 781 bits (2017), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/688 (56%), Positives = 523/688 (76%), Gaps = 17/688 (2%)
Query: 11 AGVGGGSSGNKMPTL--EEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCL 68
A GG + G +L +++G NLT+ A + KLDPV+GR +IERV+Q+L RRTKNNP L
Sbjct: 151 AAAGGPAEGTPSTSLVLDQFGRNLTQAARDSKLDPVIGRAKEIERVMQVLSRRTKNNPVL 210
Query: 69 IGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLME 128
IGEPGVGKTA+ EGLAQ I G+VP+T++ K++ TLD+G LVAG++YRG+FEERLKK+++
Sbjct: 211 IGEPGVGKTAVVEGLAQAIVKGEVPETLKDKQLYTLDLGALVAGSRYRGDFEERLKKVLK 270
Query: 129 EIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEK 188
EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEYRKH+EK
Sbjct: 271 EIRTRGDIILFIDEIHTLVGAGAAEGAIDAASILKPMLARGELQTIGATTLDEYRKHLEK 330
Query: 189 DPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRF 248
D ALERRFQP++V EP++ TI+ILKGLR+RYE HH++ TD ALV+AA L+ +YISDRF
Sbjct: 331 DAALERRFQPIQVGEPTLTHTIEILKGLRDRYEAHHRISITDGALVAAATLADRYISDRF 390
Query: 249 LPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDRE 308
LPDKAIDLIDEAG+R+R++ P + RE + + I +EK A+ QDFEKA LRD+E
Sbjct: 391 LPDKAIDLIDEAGARMRIKRMTAPPDLREFDDRIAAIRREKESAIDAQDFEKAASLRDKE 450
Query: 309 MDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKVSTDESD 365
L ++ K + + +AGD+ VV EVD I +++ WTGIPV K++ +E+
Sbjct: 451 KTLLSE--------KAEREKQWKAGDM-DVVAEVDDEQIAEVLANWTGIPVFKLTEEETT 501
Query: 366 RLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKA 425
RLL+ME+ LHKR+IGQ+EA+K++S+AIRR R GLK+P RP SFIF+GP+GVGK+ELAKA
Sbjct: 502 RLLRMEDELHKRIIGQEEAIKSVSQAIRRTRAGLKDPRRPGGSFIFAGPSGVGKTELAKA 561
Query: 426 LAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFD 485
LA + FG ++A+I++DM EF +R TVS+L+G+PPGYVGY EGGQLTE VRR+P++VVLFD
Sbjct: 562 LAQFLFGEDDALIQIDMGEFHDRFTVSRLVGAPPGYVGYDEGGQLTEKVRRKPFSVVLFD 621
Query: 486 EIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLD 545
EIEKAH DVFN +LQ+LEDGRLTD +GR VDFKNT+LI+T+N+G+ I K +GF +
Sbjct: 622 EIEKAHADVFNTLLQVLEDGRLTDGQGRIVDFKNTILILTTNLGTRDISK-AVGLGFQVG 680
Query: 546 YDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRL 605
D + S+Y R+K+ V EELKQ+FRPEFLNR+D+++VF QLT+ E+ EI D+M+ V +L
Sbjct: 681 NDSQ-SNYERMKNKVNEELKQHFRPEFLNRIDDIVVFHQLTEDEIIEIVDLMVARVEGQL 739
Query: 606 KTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIV 665
KD+ L++T ++ + G++P GARPLRR I R +ED+++EK+L E+ G ++V
Sbjct: 740 ANKDMSLEITPAAKKLLAHRGFDPVLGARPLRRTIQREIEDALSEKILYGELTAGQIIVV 799
Query: 666 DVDSDGNVTVLNGSSGA-PESLADPLPV 692
DV+ +G A P L D PV
Sbjct: 800 DVEGEGTDAKFTFRGEAKPIDLPDTPPV 827
>gi|312194050|ref|YP_004014111.1| ATPase AAA-2 domain-containing protein [Frankia sp. EuI1c]
gi|311225386|gb|ADP78241.1| ATPase AAA-2 domain protein [Frankia sp. EuI1c]
Length = 836
Score = 781 bits (2016), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/691 (58%), Positives = 527/691 (76%), Gaps = 22/691 (3%)
Query: 11 AGVGGGSSGNKMPTL--EEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCL 68
A G S G +L +++G NLT A E KLDPV+GR+ +IERV+Q+L RRTKNNP L
Sbjct: 152 ATAGAPSEGTPSTSLVLDQFGRNLTAAAREAKLDPVIGREKEIERVMQVLSRRTKNNPVL 211
Query: 69 IGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLME 128
IGEPGVGKTA+ EGLAQ I G+VP+T++ K++ TLD+G LVAG++YRG+FEERLKK+++
Sbjct: 212 IGEPGVGKTAVVEGLAQAIVKGEVPETLKDKQLYTLDLGALVAGSRYRGDFEERLKKVLK 271
Query: 129 EIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEK 188
EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEYRKH+EK
Sbjct: 272 EIRTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIGATTLDEYRKHLEK 331
Query: 189 DPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRF 248
D ALERRFQP++V EPSV TI+ILKGLR+RYE HH++ TD ALV+AA L+ +YISDRF
Sbjct: 332 DAALERRFQPIQVAEPSVAHTIEILKGLRDRYEAHHRVSITDAALVAAASLADRYISDRF 391
Query: 249 LPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDRE 308
LPDKAIDLIDEAGSR+R+R P + RE ++ + + ++K A+ QDFEKA LRD+E
Sbjct: 392 LPDKAIDLIDEAGSRMRIRRMTAPPDLREFDERIANVRRDKESAIDAQDFEKAASLRDKE 451
Query: 309 MDLKAQISALVDKGKEMSKAETEAGDVGPVVTEV---DIQHIVSAWTGIPVEKVSTDESD 365
+L + DK K + E +AGD+ VV EV +I +++ WTGIPV K++ +E+
Sbjct: 452 KNL------IADKAKR--EKEWKAGDMD-VVAEVGDEEIAEVLAIWTGIPVFKLTEEETA 502
Query: 366 RLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKA 425
RLL+ME+ LH+RVIGQ +A+KA+S+AIRR R GLK+P RP SFIF+GP+GVGK+EL+K
Sbjct: 503 RLLRMEDELHRRVIGQQQAIKAVSQAIRRTRAGLKDPKRPGGSFIFAGPSGVGKTELSKT 562
Query: 426 LAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFD 485
LA + FG E+A+I+LDMSE+ME+HTVS+L+GSPPGYVGY EGGQLTE VRR+P++VVLFD
Sbjct: 563 LAEFLFGDEDALIQLDMSEYMEKHTVSRLVGSPPGYVGYEEGGQLTERVRRKPFSVVLFD 622
Query: 486 EIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLD 545
E+EKAHPDVFN +LQILEDGRLTDS+GR VDFKNT+LIMTSN+G+ I KG IGF
Sbjct: 623 EVEKAHPDVFNTLLQILEDGRLTDSQGRLVDFKNTVLIMTSNLGTRDISKGP-GIGFATG 681
Query: 546 YDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRL 605
D Y R+K+ V +ELKQ+FRPEFLNR+D++IVF QL++ E+ +I D+ML V +L
Sbjct: 682 QGAVD--YERMKAKVQDELKQHFRPEFLNRIDDIIVFHQLSQDEIIQIVDLMLARVDAQL 739
Query: 606 KTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIV 665
K KD+ L++T ++ + GY+P GARPLRR I R +ED ++EK+L +K G+ VI
Sbjct: 740 KNKDMALELTPAAKQLLAVRGYDPVLGARPLRRTIQREIEDVLSEKILYGTLKPGEIVIG 799
Query: 666 DVDSDGNVT----VLNGSSGAPESLADPLPV 692
DV+ D V G + P S+ D P+
Sbjct: 800 DVEGDPTAEDAKFVFRGET-KPSSVPDTPPI 829
>gi|357052633|ref|ZP_09113738.1| hypothetical protein HMPREF9467_00710 [Clostridium clostridioforme
2_1_49FAA]
gi|355386466|gb|EHG33505.1| hypothetical protein HMPREF9467_00710 [Clostridium clostridioforme
2_1_49FAA]
Length = 861
Score = 781 bits (2016), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/660 (57%), Positives = 510/660 (77%), Gaps = 9/660 (1%)
Query: 12 GVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGE 71
G G GN PTL+ Y NLT+LA GKLDPV+GR+ +I+RV+QIL RRTKNNPCLIGE
Sbjct: 156 GARAGKRGNATPTLDSYSRNLTQLATAGKLDPVIGREQEIQRVIQILSRRTKNNPCLIGE 215
Query: 72 PGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIK 131
PGVGKTA+ EGLAQ IASGDVP+TI K+V+TLD+ +VAG+KYRGEFEER+KK++ E+
Sbjct: 216 PGVGKTAVVEGLAQMIASGDVPETIADKRVVTLDLSGMVAGSKYRGEFEERIKKVISEVV 275
Query: 132 QSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPA 191
+S +++LFIDE+HT+IGAG AEGA+DA+NILKPSLARGE+Q IGATT++EYRK+IEKD A
Sbjct: 276 ESGDVLLFIDEIHTIIGAGGAEGALDASNILKPSLARGEIQLIGATTINEYRKYIEKDSA 335
Query: 192 LERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPD 251
LERRFQPV V EP+ +E++ ILKGLR RYE HHK+ TD AL +A +LS +YI+DRFLPD
Sbjct: 336 LERRFQPVTVDEPTEEESVAILKGLRSRYEEHHKVEITDNALEAAVKLSSRYINDRFLPD 395
Query: 252 KAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDL 311
KAIDLIDEA S+VRL++ P++ + E E+ + + K EA++ + +EKAGE++ ++ L
Sbjct: 396 KAIDLIDEAASKVRLQNYTKPDKIKVYEAEIDGLEEAKEEAIKKEAYEKAGEIKKKQEKL 455
Query: 312 KAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKME 371
+ +I+ + M K + + +V++ +I +VS WT IPV K++ +ES+RL +E
Sbjct: 456 REKIT------QTMEKWQKDKESKKLIVSDNEIADVVSGWTRIPVRKLAEEESERLRNLE 509
Query: 372 ETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYF 431
LH+RV+GQ+EAV AIS+AIRR RVGLK+P RPI SF+F GPTGVGK+EL+KAL+ F
Sbjct: 510 GILHQRVVGQEEAVTAISKAIRRGRVGLKDPKRPIGSFLFLGPTGVGKTELSKALSEAMF 569
Query: 432 GSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAH 491
G+E A+IR+DMSE+ME+H+VSK+IGSPPGYVGY EGGQL+E VRR PY+V+LFDEIEKAH
Sbjct: 570 GTENALIRVDMSEYMEKHSVSKMIGSPPGYVGYDEGGQLSEKVRRNPYSVILFDEIEKAH 629
Query: 492 PDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDS 551
PDVFN++LQ+L+DG +TD++GR +DFKNT++IMTSN G+ I +R+GF + D K +
Sbjct: 630 PDVFNILLQVLDDGHITDAQGRKIDFKNTIIIMTSNAGAENI-ISPKRLGFGMVSDAK-A 687
Query: 552 SYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTK-DI 610
Y +K V +E+K+ F+PEFLNR+DE+IVF QLT+ +K IADIML + R K + I
Sbjct: 688 DYTFMKDRVMDEVKRLFKPEFLNRIDEIIVFHQLTREHIKGIADIMLGTISKRCKEQLGI 747
Query: 611 ELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSD 670
L+ T+ +E ++++GY+ YGARPLRR I L+ED MAE+ML IK G V V D +
Sbjct: 748 GLEATDSAKEHLIDKGYDDKYGARPLRRTIQNLVEDRMAEEMLDGSIKAGSLVEVGFDGE 807
>gi|317123796|ref|YP_004097908.1| ATPase AAA [Intrasporangium calvum DSM 43043]
gi|315587884|gb|ADU47181.1| ATPase AAA-2 domain protein [Intrasporangium calvum DSM 43043]
Length = 874
Score = 781 bits (2016), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 388/673 (57%), Positives = 523/673 (77%), Gaps = 20/673 (2%)
Query: 7 EAVGAGVGGGSSGNKMPT----LEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRT 62
E GAGVG ++G P L+++G NLT+ A EGKLDPV+GR+ +IERV+Q+L RRT
Sbjct: 153 EKTGAGVGQ-ATGEGTPAGSLVLDQFGRNLTQAAREGKLDPVIGREKEIERVMQVLSRRT 211
Query: 63 KNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEER 122
KNNP LIGEPGVGKTA+ EGLAQ I G+VP+T++ K++ TLD+G LVAG++YRG+FEER
Sbjct: 212 KNNPVLIGEPGVGKTAVVEGLAQDIVKGEVPETLKDKQLYTLDLGSLVAGSRYRGDFEER 271
Query: 123 LKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEY 182
LKK+++EI+ +II+FIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEY
Sbjct: 272 LKKVLKEIRTRGDIIIFIDEIHTLVGAGAAEGAIDAASILKPMLARGELQTIGATTLDEY 331
Query: 183 RKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQ 242
RKHIEKD ALERRFQP++V EP++ TI+ILKGLR+RYE HH++ TD ALV+AA ++ +
Sbjct: 332 RKHIEKDSALERRFQPIQVQEPTLPHTIEILKGLRDRYEAHHRVTITDGALVAAANMADR 391
Query: 243 YISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAG 302
Y++DRFLPDKAIDLIDEAG+R+R+R P + RE ++++ + +EK A+ GQDFE+A
Sbjct: 392 YVNDRFLPDKAIDLIDEAGARLRIRRMTAPPDLREFDEKIAHLVREKESAIDGQDFERAA 451
Query: 303 ELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKV 359
+RD E L+A+ K +A+ ++GD+ VV EVD I +++A TGIPV K+
Sbjct: 452 RVRDEEKKLRAE--------KAEREAQWKSGDMD-VVAEVDEELIAEVLAASTGIPVFKL 502
Query: 360 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 419
+ +ES RLL ME+ LHKR++G ++AVKA+S+AIRR R GLK+P RP SFIF+GPTGVGK
Sbjct: 503 TEEESSRLLHMEDELHKRIVGMNDAVKALSQAIRRTRAGLKDPRRPGGSFIFAGPTGVGK 562
Query: 420 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 479
+ELAK LA + FGSE+A+I+LDMSEF E+HTVS+L GSPPGYVGY EGGQLTE VRR+P+
Sbjct: 563 TELAKTLAEFLFGSEDALIQLDMSEFSEKHTVSRLFGSPPGYVGYEEGGQLTEKVRRKPF 622
Query: 480 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 539
+VVLFDE+EKAHP++FN +LQ+LEDGRLTDS+GR VDFKNT++IMT+N+G+ I K
Sbjct: 623 SVVLFDEVEKAHPEIFNSLLQVLEDGRLTDSQGRMVDFKNTVIIMTTNLGTRDISKAS-- 680
Query: 540 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 599
+GF D + S Y R+K+ V +ELKQ+FRPEFLNR+D+ IVF L++ E+ +I D+ +
Sbjct: 681 MGFSAGPDTR-SDYERMKAKVIDELKQHFRPEFLNRVDDTIVFPHLSRDEIIQIVDLEIA 739
Query: 600 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 659
++ RLK KD+ + +T+ ++ + ++GY+ GARPLRR I R +ED+++EK+L E
Sbjct: 740 KLDKRLKDKDMGIDLTQAAKDLLAKKGYDHVLGARPLRRTIQREIEDALSEKILYAEFTS 799
Query: 660 GDSVIVDVDSDGN 672
G + VD + +G
Sbjct: 800 GQYIKVDTEGEGK 812
>gi|441508083|ref|ZP_20990008.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Gordonia
aichiensis NBRC 108223]
gi|441448010|dbj|GAC47969.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Gordonia
aichiensis NBRC 108223]
Length = 848
Score = 781 bits (2016), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/665 (58%), Positives = 516/665 (77%), Gaps = 18/665 (2%)
Query: 11 AGVGGGSSGNKMPT----LEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNP 66
AG GG SS + P+ L+++G NLT A EGKLDPV+GR+ +IERV+Q+L RRTKNNP
Sbjct: 153 AGTGGRSSESGTPSTSLVLDQFGRNLTAAAAEGKLDPVIGREKEIERVMQVLSRRTKNNP 212
Query: 67 CLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKL 126
LIGEPGVGKTA+ EGLAQ I +G VP+T++ K++ TLD+G LVAG++YRG+FEERLKK+
Sbjct: 213 VLIGEPGVGKTAVVEGLAQAIVNGQVPETLKDKQLYTLDLGSLVAGSRYRGDFEERLKKV 272
Query: 127 MEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHI 186
++EI +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEYRK+I
Sbjct: 273 LKEINTRGDIILFIDELHTLVGAGAAEGAIDAASILKPKLARGELQTIGATTLDEYRKYI 332
Query: 187 EKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISD 246
EKD ALERRFQPV+V EPSV+ TI+ILKGLR+RYE HH++ TD ALV+AA L+ +YI+D
Sbjct: 333 EKDAALERRFQPVQVGEPSVEHTIEILKGLRDRYETHHRVSITDGALVAAATLADRYIND 392
Query: 247 RFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRD 306
RFLPDKAIDLIDEAG+R+R+R P + RE ++ + KEK A+ QDFEKA LRD
Sbjct: 393 RFLPDKAIDLIDEAGARMRIRRMTAPPDLREFDERIADARKEKESAIDAQDFEKAASLRD 452
Query: 307 REMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKVSTDE 363
+E LV++ E K + +GD+ VV EVD I ++ WTGIPV K++ +E
Sbjct: 453 KE-------KQLVNERAEREK-QWRSGDM-DVVAEVDDEQIAEVLGNWTGIPVFKLTEEE 503
Query: 364 SDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELA 423
+ RLL+ME+ LHKR+IGQ++AVKA+S+AIRR R GLK+P RP SFIF+GP+GVGK+EL+
Sbjct: 504 TTRLLRMEDELHKRIIGQEDAVKAVSKAIRRTRAGLKDPKRPSGSFIFAGPSGVGKTELS 563
Query: 424 KALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVL 483
KALA + FG ++A+I++DM EF +R T S+L G+PPGYVGY EGGQLTE VRR+P++VVL
Sbjct: 564 KALANFLFGEDDALIQIDMGEFHDRFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVVL 623
Query: 484 FDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFD 543
FDEIEKAH +++N +LQ+LEDGRLTD +GRTVDFKNT+LI TSN+G+S I K +GF
Sbjct: 624 FDEIEKAHSEIYNTLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGTSDISK-AVGLGF- 681
Query: 544 LDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFD 603
D+ S+Y R+K V +ELK++FRPEFLNR+D++IVF QLT+ E+ ++ D+M+ V
Sbjct: 682 TKGDDSTSNYERMKLKVNDELKKHFRPEFLNRIDDVIVFHQLTQDEIIQMVDLMIARVET 741
Query: 604 RLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSV 663
+LK KD+ +++T+R + + G++P GARPLRR I R +ED ++EK+L E+ G V
Sbjct: 742 QLKNKDMAIELTDRAKSLLARRGFDPVLGARPLRRTIQREIEDQLSEKILFNELTAGQIV 801
Query: 664 IVDVD 668
+VDV+
Sbjct: 802 LVDVE 806
>gi|405981990|ref|ZP_11040314.1| hypothetical protein HMPREF9240_01320 [Actinomyces neuii BVS029A5]
gi|404390781|gb|EJZ85847.1| hypothetical protein HMPREF9240_01320 [Actinomyces neuii BVS029A5]
Length = 841
Score = 781 bits (2016), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/658 (59%), Positives = 520/658 (79%), Gaps = 14/658 (2%)
Query: 15 GGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGV 74
G SG+ + L+++G NLTK A E KLDPV+GR+ ++ERV+QIL RRTKNNP LIGEPGV
Sbjct: 166 GQKSGSAI--LDQFGRNLTKAAHEQKLDPVIGRKNEMERVMQILSRRTKNNPVLIGEPGV 223
Query: 75 GKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSD 134
GKT++ EGLAQ I +GDVP+T++ K++ +LDMG LVAG++YRG+FEERLKK+++EI+
Sbjct: 224 GKTSVVEGLAQAIVAGDVPETLKDKQLYSLDMGSLVAGSRYRGDFEERLKKVLKEIRTRG 283
Query: 135 EIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALER 194
+IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATT DEYRKHIEKD ALER
Sbjct: 284 DIILFIDEIHTLVGAGAAEGAIDAASILKPMLARGELQTIGATTNDEYRKHIEKDAALER 343
Query: 195 RFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAI 254
RFQPV+V +P+V+ET ILKGLR+RYE HH++ TDEA+ +AA LS +YISDRFLPDKAI
Sbjct: 344 RFQPVRVEQPTVEETELILKGLRDRYEAHHRVIITDEAIKAAATLSDRYISDRFLPDKAI 403
Query: 255 DLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQ 314
DLIDEAG+R+R+R P E RE+++++ + ++K A+ QDFE A LRD+E L +
Sbjct: 404 DLIDEAGARLRIRRMTAPPELREIDEKIADVRRKKESAIDDQDFEAAASLRDQEKKLSEE 463
Query: 315 ISALVDKGKEMSKAETEAGDVGPV--VTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEE 372
++ ++E ++GD+ + VTE I +++ TGIPV K++ ES +LL ME+
Sbjct: 464 RAS--------KESEWKSGDMDRIAEVTEESIAEVLAMSTGIPVFKLTETESAKLLHMED 515
Query: 373 TLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFG 432
LHKR+IGQDEAVKA+S++IRR R GLK+P RP SFIF+GPTGVGK+ELAKALA + FG
Sbjct: 516 ALHKRIIGQDEAVKALSKSIRRTRAGLKDPKRPGGSFIFAGPTGVGKTELAKALAEFLFG 575
Query: 433 SEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHP 492
E+A+I+LDMSEF E+HT S+L G+PPGYVG+ EGG+LTE VRRRP++VVLFDE+EKAHP
Sbjct: 576 DEDALIQLDMSEFGEKHTSSRLFGAPPGYVGFDEGGELTEKVRRRPFSVVLFDEVEKAHP 635
Query: 493 DVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSS 552
D+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N+G+ I K G GF E +
Sbjct: 636 DIFNTLLQILEDGRLTDSQGRLVDFKNTVIIMTTNLGTRDINK-GVMTGFQA-AGELSTD 693
Query: 553 YNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIEL 612
Y+R++S V+EELKQ+FRPEFLNR+DE++VF L + E+ I D+M+ ++ +R+ +++++
Sbjct: 694 YDRMRSKVSEELKQHFRPEFLNRVDEVVVFPPLKRNEIVRIVDLMMGQLSERMADRNMKI 753
Query: 613 QVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSD 670
++T RE + ++GY+P GARPLRRAI R +ED ++EK+L + K+G+SV VDVD D
Sbjct: 754 ELTADARELLADKGYDPVLGARPLRRAIQREIEDPLSEKILFGDFKDGESVQVDVDPD 811
>gi|421837623|ref|ZP_16271749.1| negative regulator of genetic competence MecB/ClpC [Clostridium
botulinum CFSAN001627]
gi|409740189|gb|EKN40560.1| negative regulator of genetic competence MecB/ClpC [Clostridium
botulinum CFSAN001627]
Length = 637
Score = 781 bits (2016), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/637 (59%), Positives = 513/637 (80%), Gaps = 8/637 (1%)
Query: 35 LAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPD 94
+AEEGK+DPV+GR + +RV++IL RRTKNNPCLIGEPGVGKTAIAEGLAQ I G++P+
Sbjct: 1 MAEEGKVDPVIGRDKETQRVLEILCRRTKNNPCLIGEPGVGKTAIAEGLAQNIIDGNIPE 60
Query: 95 TIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEG 154
++ K+V+TLD+ ++AG KYRGEFE+RLKK+MEE++ S + ILFIDE+HT++GAGAAEG
Sbjct: 61 ILKNKRVVTLDLTSMIAGAKYRGEFEDRLKKIMEEVRSSKDTILFIDEIHTIVGAGAAEG 120
Query: 155 AIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILK 214
AIDAANILKP+LARGE+QCIGATTLDEYRK+IEKD ALERRFQP+ V EP+ +ETI+ILK
Sbjct: 121 AIDAANILKPALARGEIQCIGATTLDEYRKYIEKDSALERRFQPINVGEPTKEETIEILK 180
Query: 215 GLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEE 274
GLR++YE HH++++TD+A+ +A LS +YI DRFLPDKAIDL+DEAGS+VR+++ P +
Sbjct: 181 GLRDKYEAHHRVKFTDDAIYAAVNLSDRYIRDRFLPDKAIDLMDEAGSKVRIQNLIAPPD 240
Query: 275 ARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGD 334
+ +E++L ++ KEK +A+R QDFEKA LRD+E +LK ++ L AE E +
Sbjct: 241 LKNIEEQLDKVVKEKEDAIRVQDFEKAANLRDKEKELKEKLEGLKKDW----NAEKEGSN 296
Query: 335 VGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRR 394
+ +V+E I +VS WT IPV K++ ES+RLLK+E LH RVIGQ+EA+K++SR++RR
Sbjct: 297 L--IVSEQQIAAVVSNWTNIPVNKLTEKESERLLKLENILHNRVIGQEEAIKSVSRSVRR 354
Query: 395 ARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKL 454
ARVGLK+P RPI SFIF GPTGVGK+EL KALA FG+E MIR+DMSE+ME+H+VS+L
Sbjct: 355 ARVGLKDPKRPIGSFIFLGPTGVGKTELTKALAEAMFGNENNMIRVDMSEYMEKHSVSRL 414
Query: 455 IGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRT 514
IGSPPGYVG+ EGGQLT+ VR PY+VVLFDEIEKAHP+VFN++LQILEDGRLTD KG+T
Sbjct: 415 IGSPPGYVGHDEGGQLTDKVRTNPYSVVLFDEIEKAHPEVFNILLQILEDGRLTDGKGKT 474
Query: 515 VDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDY-DEKDSSYNRIKSLVTEELKQYFRPEFL 573
VDF+NT++IMTSNVG+S I + + +GF+ +E+++ Y ++K + ELK FRPEFL
Sbjct: 475 VDFRNTIIIMTSNVGASTISR-QKTLGFNTSIEEERETEYEKMKDNIMNELKHSFRPEFL 533
Query: 574 NRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGA 633
NR+D++IVF QL + ++EI +MLK V +R+K + I+L+ TE + + +EGY+ +YGA
Sbjct: 534 NRIDDIIVFHQLREEHIREIVKLMLKTVSNRVKDQGIKLEFTEEAEKILAKEGYDTNYGA 593
Query: 634 RPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSD 670
RPLRRAI +++ED ++E++L IK+GDSV V+ D
Sbjct: 594 RPLRRAITKIVEDKLSEEILKGNIKKGDSVKVNTIED 630
>gi|302870292|ref|YP_003838929.1| ATPase AAA-2 domain-containing protein [Micromonospora aurantiaca
ATCC 27029]
gi|315503432|ref|YP_004082319.1| ATPase AAA-2 domain-containing protein [Micromonospora sp. L5]
gi|302573151|gb|ADL49353.1| ATPase AAA-2 domain protein [Micromonospora aurantiaca ATCC 27029]
gi|315410051|gb|ADU08168.1| ATPase AAA-2 domain protein [Micromonospora sp. L5]
Length = 845
Score = 781 bits (2016), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/676 (58%), Positives = 529/676 (78%), Gaps = 20/676 (2%)
Query: 24 TLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGL 83
L+++G NLT+ A EGKLDPV+GR+ +IERV+Q+L RRTKNNP LIGEPGVGKTA+ EGL
Sbjct: 167 VLDQFGRNLTQAAREGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGL 226
Query: 84 AQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEV 143
+Q+I G+VP+T++ K++ TLD+G LVAG++YRG+FEERLKK+++EI+ +IILFIDE+
Sbjct: 227 SQKIIKGEVPETLKDKQLYTLDLGALVAGSRYRGDFEERLKKVLKEIRTRGDIILFIDEI 286
Query: 144 HTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPE 203
HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEYRKH+EKD ALERRFQP++V E
Sbjct: 287 HTLVGAGAAEGAIDAASILKPMLARGELQTIGATTLDEYRKHLEKDAALERRFQPIQVGE 346
Query: 204 PSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSR 263
PS+ TI+ILKGLR+RYE HH++ TD ALV+AA L+ +YISDRFLPDKAIDLIDEAG+R
Sbjct: 347 PSLAHTIEILKGLRDRYEAHHRVSITDAALVAAATLADRYISDRFLPDKAIDLIDEAGAR 406
Query: 264 VRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGK 323
+R+R P + R+ ++ + Q+ ++K A+ QDFE+A +LRD E L Q K
Sbjct: 407 MRIRRMTAPPDLRDFDERIAQVRRDKESAIDAQDFERAAQLRDTEKQLLGQ--------K 458
Query: 324 EMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIG 380
+ E +AGD+ VV+EVD I ++ WTGIPV K++ +E+ RLL+ME+ LHKRVIG
Sbjct: 459 AQREKEWKAGDL-DVVSEVDDEQIAEVLGNWTGIPVYKLTEEETSRLLRMEDELHKRVIG 517
Query: 381 QDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRL 440
Q++AVKA+S+AIRR R GLK+P RP SFIF+GP+GVGK+EL+KALA + FGSE+A+I+L
Sbjct: 518 QEDAVKAVSKAIRRTRAGLKDPKRPSGSFIFAGPSGVGKTELSKALAEFLFGSEDALIQL 577
Query: 441 DMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQ 500
DMSEF +R+TVS+L+G+PPGYVGY EGGQLTE VRRRP++VVLFDEIEKAHPDVFN +LQ
Sbjct: 578 DMSEFHDRYTVSRLVGAPPGYVGYDEGGQLTEKVRRRPFSVVLFDEIEKAHPDVFNTLLQ 637
Query: 501 ILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLV 560
ILEDGRLTD +GR VDFKNT++I+T+N+G+ + K +GF D +S+Y+R+K V
Sbjct: 638 ILEDGRLTDGQGRIVDFKNTVIILTTNLGTRDVAK-AVSLGFQASED-SESNYDRMKQKV 695
Query: 561 TEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRE 620
+ELKQ+FRPEFLNR+D+ IVF QL +LE+ I DIM+ + +L+ KD+ L++T+ ++
Sbjct: 696 NDELKQHFRPEFLNRIDDTIVFHQLRQLEILSIVDIMIARIETQLRNKDMGLELTDNAKK 755
Query: 621 RVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDV-----DSDGNVTV 675
+ ++G++P GARPLRR I R +ED+++E++L E+ G V+VD D D + V
Sbjct: 756 YLAKKGFDPVLGARPLRRTIQRDIEDNLSERILFNELTPGQIVVVDCEGDPEDIDKSKLV 815
Query: 676 LNGSSGAPESLADPLP 691
G+ P+++ D +P
Sbjct: 816 FRGAD-RPDAVPDAVP 830
>gi|288920479|ref|ZP_06414787.1| ATPase AAA-2 domain protein [Frankia sp. EUN1f]
gi|288348131|gb|EFC82400.1| ATPase AAA-2 domain protein [Frankia sp. EUN1f]
Length = 834
Score = 780 bits (2015), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/674 (59%), Positives = 522/674 (77%), Gaps = 18/674 (2%)
Query: 24 TLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGL 83
L+++G NLT A E KLDPV+GR+ +IERV+Q+L RRTKNNP LIGEPGVGKTA+ EGL
Sbjct: 167 VLDQFGRNLTAAARESKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGL 226
Query: 84 AQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEV 143
AQ I G+VP+T++ K++ TLD+G LVAG++YRG+FEERLKK+++EI+ +IILFIDE+
Sbjct: 227 AQAIVKGEVPETLKDKQLYTLDLGALVAGSRYRGDFEERLKKVLKEIRTRGDIILFIDEL 286
Query: 144 HTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPE 203
HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEYRKH+EKD ALERRFQP++V E
Sbjct: 287 HTLVGAGAAEGAIDAASILKPMLARGELQTIGATTLDEYRKHLEKDAALERRFQPIQVAE 346
Query: 204 PSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSR 263
PSV TI+ILKGLR+RYE HH++ TD ALV+AA L+ +YISDRFLPDKAIDLIDEAGSR
Sbjct: 347 PSVAHTIEILKGLRDRYEAHHRVSITDAALVAAASLADRYISDRFLPDKAIDLIDEAGSR 406
Query: 264 VRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGK 323
+R+R P + RE ++ + + ++K A+ QDFEKA LRD+E L A+ K
Sbjct: 407 MRIRRMTAPPDLREFDERIANVRRDKESAIDAQDFEKAASLRDKEKTLLAE--------K 458
Query: 324 EMSKAETEAGDVGPVVTEV---DIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIG 380
+ E +AGD+ VV EV +I +++ WTGIPV K++ +E+ RLL+ME+ LHKRVIG
Sbjct: 459 AKREKEWKAGDMD-VVAEVGDEEIAEVLAIWTGIPVFKLTEEETARLLRMEDELHKRVIG 517
Query: 381 QDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRL 440
Q++A+KA+S+AIRR R GLK+P RP SFIF+GP+GVGK+EL+K LA + FG E+A+I+L
Sbjct: 518 QEQAIKAVSQAIRRTRAGLKDPKRPGGSFIFAGPSGVGKTELSKTLAEFLFGDEDALIQL 577
Query: 441 DMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQ 500
DMSE+ME+HTVS+L+GSPPGYVGY EGGQLTE VRR+P++VVLFDE+EKAHPDVFN +LQ
Sbjct: 578 DMSEYMEKHTVSRLVGSPPGYVGYEEGGQLTERVRRKPFSVVLFDEVEKAHPDVFNTLLQ 637
Query: 501 ILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLV 560
ILEDGRLTDS+GR VDFKNT+LIMTSN+G+ I KG IGF D Y R+K+ V
Sbjct: 638 ILEDGRLTDSQGRLVDFKNTVLIMTSNLGTRDISKGP-GIGFATGQGAID--YERMKAKV 694
Query: 561 TEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRE 620
+ELKQ+FRPEFLNR+D++IVF QL+++E+ +I D+ML V +LK KD+ L++T +
Sbjct: 695 QDELKQHFRPEFLNRIDDIIVFHQLSEVEIIQIVDLMLARVDSQLKNKDMALELTPAAKV 754
Query: 621 RVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVT--VLNG 678
+ + GY+P GARPLRR I R +ED ++EK+L ++ G+ V+ DV+ +G V G
Sbjct: 755 LLAKRGYDPVLGARPLRRTIQREIEDVLSEKILYGTLRPGEIVVGDVEGEGEEAKFVFRG 814
Query: 679 SSGAPESLADPLPV 692
P S+ D P+
Sbjct: 815 EP-KPNSVPDAPPI 827
>gi|333918015|ref|YP_004491596.1| chaperone activity ATPase [Amycolicicoccus subflavus DQS3-9A1]
gi|333480236|gb|AEF38796.1| ATPase with chaperone activity, ATP-binding subunit
[Amycolicicoccus subflavus DQS3-9A1]
Length = 851
Score = 780 bits (2015), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/694 (56%), Positives = 528/694 (76%), Gaps = 16/694 (2%)
Query: 4 ESTEAVGAGVGGGSSGNKMPTL--EEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRR 61
+ E AGVG G +G +L +++G NLT+ A EGKLDPV+GRQ +IERV+Q+L RR
Sbjct: 146 QGKEPAEAGVGRGEAGTPSTSLVLDQFGRNLTQAAMEGKLDPVIGRQKEIERVMQVLSRR 205
Query: 62 TKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEE 121
TKNNP LIGEPGVGKTA+ EGLAQ I +G+VP+T++ K++ TLD+G LVAG++YRG+FEE
Sbjct: 206 TKNNPVLIGEPGVGKTAVVEGLAQSIVNGEVPETLKDKQLYTLDLGSLVAGSRYRGDFEE 265
Query: 122 RLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDE 181
RLKK+++EI +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDE
Sbjct: 266 RLKKVLKEINTRGDIILFIDELHTLVGAGAAEGAIDAASILKPKLARGELQTIGATTLDE 325
Query: 182 YRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSY 241
YRK+IEKD ALERRFQPV+V EPSV+ TI+ILKGLR+RYE HH++ TD ALV+AA L+
Sbjct: 326 YRKYIEKDAALERRFQPVQVGEPSVEHTIEILKGLRDRYEAHHRVSITDGALVAAATLAD 385
Query: 242 QYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKA 301
+YI+DRFLPDKAIDLIDEAG+R+R+R P + RE ++ + + +EK A+ QDFEKA
Sbjct: 386 RYINDRFLPDKAIDLIDEAGARMRIRRMTAPPDLREFDERIAEARREKESAIDAQDFEKA 445
Query: 302 GELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEK 358
+LRD+E L AQ + + + +GD+ VV +VD I ++S WTGIPV K
Sbjct: 446 AKLRDKEKQLVAQ--------RAEREKQWRSGDL-DVVAQVDDEQIAEVLSNWTGIPVFK 496
Query: 359 VSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVG 418
++ +E+ RLL+ME+ LHKR+IGQ++AV+A+++AIRR R GLK+P RP SFIF+GP+GVG
Sbjct: 497 LTEEETSRLLRMEDELHKRIIGQEDAVRAVAKAIRRTRAGLKDPRRPSGSFIFAGPSGVG 556
Query: 419 KSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRP 478
K+EL+KALA + FG ++A+I++DM EF +R T S+L G+PPGYVGY EGGQLTE VRR+P
Sbjct: 557 KTELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPGYVGYEEGGQLTEKVRRKP 616
Query: 479 YTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR 538
++VVLFDEIEKAH +++N +LQ+LEDGRLTD +GRTVDFKNT+LI TSN+G++ I K
Sbjct: 617 FSVVLFDEIEKAHQEIYNTLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGTADISK-AV 675
Query: 539 RIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIML 598
+GF E S+Y R+K V +ELK++FRPEFLNR+D++IVF QLT+ ++ E+ D+M
Sbjct: 676 GLGFTAGTSEA-SNYERMKLKVNDELKKHFRPEFLNRIDDVIVFHQLTQEQIIEMVDLMT 734
Query: 599 KEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIK 658
V +LK KD+ L++TE+ + + + G++P GARPLRR + R +ED ++EK+L EI+
Sbjct: 735 NRVETQLKHKDMALELTEQAKSLLAKRGFDPVLGARPLRRTVQREIEDQLSEKILFGEIE 794
Query: 659 EGDSVIVDVDSDGNVTVLNGSSGAPESLADPLPV 692
G ++VDV++ + + P+PV
Sbjct: 795 PGQIIVVDVENWDGTGAGENAKFTFQGTKKPVPV 828
>gi|377561326|ref|ZP_09790784.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Gordonia
otitidis NBRC 100426]
gi|377521514|dbj|GAB35949.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Gordonia
otitidis NBRC 100426]
Length = 848
Score = 780 bits (2015), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/665 (58%), Positives = 516/665 (77%), Gaps = 18/665 (2%)
Query: 11 AGVGGGSSGNKMPT----LEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNP 66
AG GG SS + P+ L+++G NLT A EGKLDPV+GR+ +IERV+Q+L RRTKNNP
Sbjct: 153 AGTGGRSSESGTPSTSLVLDQFGRNLTAAAAEGKLDPVIGREKEIERVMQVLSRRTKNNP 212
Query: 67 CLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKL 126
LIGEPGVGKTA+ EGLAQ I +G VP+T++ K++ TLD+G LVAG++YRG+FEERLKK+
Sbjct: 213 VLIGEPGVGKTAVVEGLAQAIVNGQVPETLKDKQLYTLDLGSLVAGSRYRGDFEERLKKV 272
Query: 127 MEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHI 186
++EI +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEYRK+I
Sbjct: 273 LKEINTRGDIILFIDELHTLVGAGAAEGAIDAASILKPKLARGELQTIGATTLDEYRKYI 332
Query: 187 EKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISD 246
EKD ALERRFQPV+V EPSV+ TI+ILKGLR+RYE HH++ TD ALV+AA L+ +YI+D
Sbjct: 333 EKDAALERRFQPVQVGEPSVEHTIEILKGLRDRYETHHRVSITDGALVAAATLADRYIND 392
Query: 247 RFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRD 306
RFLPDKAIDLIDEAG+R+R+R P + RE ++ + KEK A+ QDFEKA LRD
Sbjct: 393 RFLPDKAIDLIDEAGARMRIRRMTAPPDLREFDERIADARKEKESAIDAQDFEKAASLRD 452
Query: 307 REMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKVSTDE 363
+E LV++ E K + +GD+ VV EVD I ++ WTGIPV K++ +E
Sbjct: 453 KE-------KQLVNERAEREK-QWRSGDM-DVVAEVDDEQIAEVLGNWTGIPVFKLTEEE 503
Query: 364 SDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELA 423
+ RLL+ME+ LHKR+IGQ++AVKA+S+AIRR R GLK+P RP SFIF+GP+GVGK+EL+
Sbjct: 504 TTRLLRMEDELHKRIIGQEDAVKAVSKAIRRTRAGLKDPKRPSGSFIFAGPSGVGKTELS 563
Query: 424 KALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVL 483
KALA + FG ++A+I++DM EF +R T S+L G+PPGYVGY EGGQLTE VRR+P++VVL
Sbjct: 564 KALANFLFGEDDALIQIDMGEFHDRFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVVL 623
Query: 484 FDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFD 543
FDEIEKAH +++N +LQ+LEDGRLTD +GRTVDFKNT+LI TSN+G+S I K +GF
Sbjct: 624 FDEIEKAHSEIYNTLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGTSDISK-AVGLGF- 681
Query: 544 LDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFD 603
D+ S+Y R+K V +ELK++FRPEFLNR+D++IVF QLT+ E+ ++ D+M+ V
Sbjct: 682 TKGDDSTSNYERMKLKVNDELKKHFRPEFLNRIDDVIVFHQLTQDEIIQMVDLMIARVET 741
Query: 604 RLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSV 663
+LK KD+ +++T+R + + G++P GARPLRR I R +ED ++EK+L E+ G V
Sbjct: 742 QLKNKDMAIELTDRAKSLLARRGFDPVLGARPLRRTIQREIEDQLSEKILFNELTPGQIV 801
Query: 664 IVDVD 668
+VDV+
Sbjct: 802 LVDVE 806
>gi|294791953|ref|ZP_06757101.1| negative regulator of genetic competence ClpC/MecB [Veillonella sp.
6_1_27]
gi|294457183|gb|EFG25545.1| negative regulator of genetic competence ClpC/MecB [Veillonella sp.
6_1_27]
Length = 815
Score = 780 bits (2015), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 383/683 (56%), Positives = 519/683 (75%), Gaps = 15/683 (2%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
++G + + G G +S N + L ++ T+L + A++GK+DPV+GR +I+RV+QIL R
Sbjct: 140 ILGSNKGSNNGGQEGINSNNDLGELSDFATDLNESAKQGKIDPVIGRDTEIQRVIQILSR 199
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNP LIGEPGVGKTAIAEGLAQRI +G+VP+ + K++I+L +G ++AG KYRGEFE
Sbjct: 200 RTKNNPVLIGEPGVGKTAIAEGLAQRIVTGNVPEILRNKRIISLSIGSMLAGAKYRGEFE 259
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
ERLKK ++E++Q D++I+FIDE+HTL+GAGA EGA+DAANILKP+LARGE Q IGATTLD
Sbjct: 260 ERLKKAIDEVQQHDDMIIFIDEIHTLVGAGATEGAMDAANILKPALARGEFQVIGATTLD 319
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EY+KHIEKD ALERRFQPV+V EP+ ++ ++ILKGLR+RYE HK + TDEAL +A LS
Sbjct: 320 EYKKHIEKDAALERRFQPVQVGEPNEEDALEILKGLRDRYEAFHKAKITDEALTAAVSLS 379
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
+YI+DRFLPDKAID++DEA S+VR++ + + LE L + KEK AV QDFEK
Sbjct: 380 SRYITDRFLPDKAIDVVDEAASKVRMKVFSAAPDVKALEDRLNTVKKEKEAAVTSQDFEK 439
Query: 301 AGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVS 360
A +LRD E L +I DK K ++K E D +VTE DI +V+ WTGIPV K++
Sbjct: 440 AAKLRDEEQSLVKEIG---DK-KSIAK---EKSDQKLIVTEEDIAAVVAQWTGIPVAKIA 492
Query: 361 TDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 420
+ES LL +EE LHKRV+GQDEAV A+++A+RRAR GLK+P RPI SF+F GPTGVGK+
Sbjct: 493 EEESATLLHLEEELHKRVVGQDEAVTAVAKAVRRARAGLKDPKRPIGSFLFLGPTGVGKT 552
Query: 421 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 480
ELA+ALA+ FG E AMIRLDMSE+ME+HTVS+L+G+PPGYVGY EGGQLT+AVRR+PY+
Sbjct: 553 ELARALASSLFGDESAMIRLDMSEYMEKHTVSRLVGAPPGYVGYEEGGQLTDAVRRKPYS 612
Query: 481 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI 540
V+L DE+EKAH D FN++LQ+L+DGRLTDS+GR VDF+NT++IMTSN+G+ + K +
Sbjct: 613 VILLDEVEKAHADFFNILLQVLDDGRLTDSQGRNVDFRNTVIIMTSNLGAKALHKNSPEL 672
Query: 541 GF------DLDYDE-KDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEI 593
GF D + DE K + K V + +K+YFRPEFLNR+DEMIVF LT+ ++KEI
Sbjct: 673 GFLAAKKADSNVDENKGIDFKEAKKSVMDAVKRYFRPEFLNRIDEMIVFHPLTEEDLKEI 732
Query: 594 ADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKML 653
I++ +V RL+ +D++L+++ + +V+EG + + GARPL+RAI RL+ED +++ +L
Sbjct: 733 VTILMSDVTKRLEERDLQLEISPEAMKLLVKEGSDFTMGARPLKRAIQRLIEDPVSDLIL 792
Query: 654 AREIKEGDSVIVDV-DSDGNVTV 675
+ KEG + D D+D V++
Sbjct: 793 KGDAKEGKIIKADAKDNDLVVSI 815
>gi|258651101|ref|YP_003200257.1| ATPase AAA-2 domain-containing protein [Nakamurella multipartita
DSM 44233]
gi|258554326|gb|ACV77268.1| ATPase AAA-2 domain protein [Nakamurella multipartita DSM 44233]
Length = 846
Score = 780 bits (2015), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/676 (57%), Positives = 518/676 (76%), Gaps = 17/676 (2%)
Query: 3 GESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRT 62
G+ T A G G+ + L+++G NLT+ A EGKLDPV+GR+ +IERV+Q+L RRT
Sbjct: 147 GKETAAAEGGRSEGTPSTSL-VLDQFGRNLTQSAREGKLDPVIGREKEIERVMQVLSRRT 205
Query: 63 KNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEER 122
KNNP LIGEPGVGKTA+ EGLAQ I GDVP T++ K + TLD+G LVAG++YRG+FEER
Sbjct: 206 KNNPVLIGEPGVGKTAVVEGLAQAIIRGDVPQTLKDKHLYTLDLGSLVAGSRYRGDFEER 265
Query: 123 LKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEY 182
LKK+++EI+ +II+FIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEY
Sbjct: 266 LKKVLKEIRTRGDIIMFIDEIHTLVGAGAAEGAIDAASILKPMLARGELQTIGATTLDEY 325
Query: 183 RKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQ 242
RK++EKD ALERRFQP++V EP+V TI+ILKGLR+RYE HH++ TD+ALVSAA L+ +
Sbjct: 326 RKYVEKDAALERRFQPIQVGEPTVAHTIEILKGLRDRYEAHHRITITDDALVSAATLADR 385
Query: 243 YISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAG 302
YISDR+LPDKAIDLIDEAG+R+R+R P + R+ +++L + ++K A+ QDFEKA
Sbjct: 386 YISDRYLPDKAIDLIDEAGARMRIRRMTAPPDLRDFDEKLAGVRRDKESAIDAQDFEKAA 445
Query: 303 ELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKV 359
LRD E L A+ S E KA + GD+ V++EVD I +++ WTGIPV K+
Sbjct: 446 ALRDTEKQLLARKS-------EREKAWKD-GDL-DVISEVDDEQIAEVLANWTGIPVFKL 496
Query: 360 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 419
+ +E+ RLLKMEE LHKR+IGQD+AVKA+S+AIRR R GLK+P RP SFIF+GP+GVGK
Sbjct: 497 TEEETTRLLKMEEELHKRIIGQDQAVKAVSQAIRRTRAGLKDPKRPSGSFIFAGPSGVGK 556
Query: 420 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 479
+EL KALA + FG E+A+I++DM EF +R+T S+L G+PPGYVGY EGGQLTE VRR+P+
Sbjct: 557 TELTKALAEFLFGDEDALIQVDMGEFHDRYTASRLFGAPPGYVGYEEGGQLTEKVRRKPF 616
Query: 480 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 539
+VVLFDEIEKAH D++N +LQ+LEDGRLTD +GRTVDFKNT+++ TSN+G+ I K
Sbjct: 617 SVVLFDEIEKAHQDIYNTLLQVLEDGRLTDGQGRTVDFKNTVIVFTSNLGTQDISKA--- 673
Query: 540 IGFDLDY-DEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIML 598
+G + +S+Y R+K V +ELK++FRPEFLNR+D+++VF QLT E+ ++ D+ML
Sbjct: 674 VGMGFQQGNNSESNYERMKQKVNDELKRHFRPEFLNRIDDVVVFHQLTTEEINQMVDLML 733
Query: 599 KEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIK 658
K V L+ KD+ L++T+ + + E G++P GARPLRR I R +ED ++EK+L EI+
Sbjct: 734 KRVEAALRNKDMSLELTDAAKTLLGERGFDPVLGARPLRRTIQREIEDKLSEKILFDEIR 793
Query: 659 EGDSVIVDVDSDGNVT 674
G ++VDV +VT
Sbjct: 794 PGQIILVDVQDATDVT 809
>gi|152968278|ref|YP_001364062.1| ATPase AAA [Kineococcus radiotolerans SRS30216]
gi|151362795|gb|ABS05798.1| ATPase AAA-2 domain protein [Kineococcus radiotolerans SRS30216]
Length = 840
Score = 780 bits (2014), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/686 (56%), Positives = 516/686 (75%), Gaps = 18/686 (2%)
Query: 14 GGGSSGNKMPT----LEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLI 69
GG S P L+++G NLT+ A EGKLDPV+GR+ QIERV+Q+L RRTKNNP LI
Sbjct: 155 GGESQREGTPAGSLVLDQFGRNLTQAAREGKLDPVIGREQQIERVMQVLSRRTKNNPMLI 214
Query: 70 GEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEE 129
GE GVGKTA+ EGLAQ I G VP+T+ K++ TLD+G LVAG++YRG+FEERLKK+++E
Sbjct: 215 GEAGVGKTAVVEGLAQEIVRGQVPETLRDKQIYTLDLGALVAGSRYRGDFEERLKKVLKE 274
Query: 130 IKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKD 189
I+ +I+LFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ +GATTLDE++K+IEKD
Sbjct: 275 IRTRGDIVLFIDEIHTLVGAGAAEGAIDAASILKPMLARGELQTVGATTLDEFKKYIEKD 334
Query: 190 PALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFL 249
PALERRFQP++VPEPS+ I+ILKGLR+RYE HH++ TD ALV+AA ++ +YI+DR+L
Sbjct: 335 PALERRFQPIQVPEPSLPHAIEILKGLRDRYEAHHRVTITDGALVAAATMADRYINDRYL 394
Query: 250 PDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREM 309
PDKAIDLIDEAG+R+R+R P + RE ++ + + +EK A+ QDFEKA LRD+E
Sbjct: 395 PDKAIDLIDEAGARLRIRRMTAPPDLREFDERIADVRREKESAIDAQDFEKAASLRDKEK 454
Query: 310 DLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKVSTDESDR 366
+ AQ + + E +G + +V EVD I +++ TGIPV +++ +ES R
Sbjct: 455 TVTAQ--------RATREKEWRSGGL-DIVAEVDEELIAEVLAVSTGIPVVRLTEEESTR 505
Query: 367 LLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKAL 426
LL ME LHKRVIGQ++A+KA+S+AIRR R GLK+P RP SFIF+GPTGVGK+ELAKAL
Sbjct: 506 LLNMEAELHKRVIGQNDAIKALSQAIRRTRAGLKDPKRPGGSFIFAGPTGVGKTELAKAL 565
Query: 427 AAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDE 486
A + FG E+A+I+LDMSEF E+HTVS+L GSPPGYVGY EGGQLTE VRR+P++VVLFDE
Sbjct: 566 AEFLFGEEDALIQLDMSEFSEKHTVSRLFGSPPGYVGYEEGGQLTEKVRRKPFSVVLFDE 625
Query: 487 IEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDY 546
+EKAHPD+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N+G+ I K +GF
Sbjct: 626 VEKAHPDIFNSLLQILEDGRLTDSQGRMVDFKNTVIIMTTNLGTRDISK-ATGLGFAAGS 684
Query: 547 DEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLK 606
K ++Y+R+KS V EELKQ+FRPEFLNR+D+ +VF QLT+ E+ +I D+ML V RLK
Sbjct: 685 QTKQTNYDRMKSKVNEELKQHFRPEFLNRVDDTVVFPQLTQEEIVQIVDLMLANVEARLK 744
Query: 607 TKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVD 666
+D+ +++T + + +GY+P GARPLRR I R +ED ++EK+L + + G + +
Sbjct: 745 DRDMGIELTPSAKVLLATKGYDPVLGARPLRRTIQRDIEDVLSEKILFGDFRAGQIISIG 804
Query: 667 VDSDGNVTVLNGSSGAPESLADPLPV 692
+ +G V +G D LPV
Sbjct: 805 TEGEGKEQVFT-YTGHARPTDDDLPV 829
>gi|403510030|ref|YP_006641668.1| sigma-54 interaction domain protein [Nocardiopsis alba ATCC
BAA-2165]
gi|402799243|gb|AFR06653.1| sigma-54 interaction domain protein [Nocardiopsis alba ATCC
BAA-2165]
Length = 813
Score = 780 bits (2014), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/664 (58%), Positives = 522/664 (78%), Gaps = 18/664 (2%)
Query: 16 GSSGNKMPT----LEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGE 71
G+S P+ L+++G NLT+ A E KLDPV+GR +IERV+Q+L RRTKNNP LIGE
Sbjct: 133 GASSESTPSTSLVLDQFGRNLTQAARESKLDPVIGRDKEIERVMQVLSRRTKNNPVLIGE 192
Query: 72 PGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIK 131
PGVGKTA+ EGLAQ+I G++P+T++ K++ TLD+G LVAG++YRG+FEERLKK+++EI+
Sbjct: 193 PGVGKTAVVEGLAQKIVKGEIPETLKDKQLYTLDLGALVAGSRYRGDFEERLKKVLKEIR 252
Query: 132 QSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPA 191
+IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEYRK++EKD A
Sbjct: 253 TRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIGATTLDEYRKYLEKDAA 312
Query: 192 LERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPD 251
LERRFQP++V EP++ I+ILKGLR+RYE HH++ TD ALV+AAQL+ +YISDRFLPD
Sbjct: 313 LERRFQPIQVDEPTITHAIEILKGLRDRYEAHHRVSITDSALVAAAQLADRYISDRFLPD 372
Query: 252 KAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDL 311
KAIDLIDEAGSR+R+R P + RE + ++ ++ ++K A+ QDFEKA LRD E
Sbjct: 373 KAIDLIDEAGSRMRIRRMTAPPDLREFDDKIAKVRRDKESAIDEQDFEKAASLRDDE--- 429
Query: 312 KAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKVSTDESDRLL 368
L++K + K E +AGD+ VV EVD I +++A TGIPV K++ +ES RLL
Sbjct: 430 ----KQLLNKKAQREK-EWKAGDMD-VVAEVDEELIAEVLAASTGIPVFKLTEEESSRLL 483
Query: 369 KMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAA 428
+ME+ LH+RVIGQ++A+KA+S+AIRR R GLK+P RP SFIF+GP+GVGK+EL+K LA
Sbjct: 484 RMEDELHRRVIGQEDAIKALSQAIRRTRAGLKDPKRPGGSFIFAGPSGVGKTELSKTLAE 543
Query: 429 YYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIE 488
+ FG E+A+I+LDMSEFME+HTVS+L GSPPGYVGY EGGQLTE VRR+P++VVLFDEIE
Sbjct: 544 FLFGDEDALIQLDMSEFMEKHTVSRLFGSPPGYVGYEEGGQLTEKVRRKPFSVVLFDEIE 603
Query: 489 KAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDE 548
KAH D+FN +LQ+LE+GRLTD++GR VDFKNT++IMT+N+G+ I K G +GF + D+
Sbjct: 604 KAHNDIFNSLLQVLEEGRLTDAQGRNVDFKNTVIIMTTNLGTRDISK-GVAMGFAKE-DD 661
Query: 549 KDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTK 608
+++Y R+K+ V+EELK FRPEFLNR+D++IVF QLT+ E+ +I D+M+ + RLK K
Sbjct: 662 ANTNYERMKAKVSEELKTNFRPEFLNRVDDVIVFHQLTEKEIFQIVDLMIANLDSRLKEK 721
Query: 609 DIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVD 668
D+ +++ ++ + E G++P GARPLRR I R +ED ++EK+L ++K G V++D +
Sbjct: 722 DMGIELRPNAKKVLSERGFDPVLGARPLRRTIQREIEDQLSEKILFGDLKAGQIVVIDAE 781
Query: 669 SDGN 672
+G
Sbjct: 782 GEGT 785
>gi|148655866|ref|YP_001276071.1| ATPase [Roseiflexus sp. RS-1]
gi|148567976|gb|ABQ90121.1| ATPase AAA-2 domain protein [Roseiflexus sp. RS-1]
Length = 845
Score = 780 bits (2014), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/660 (59%), Positives = 499/660 (75%), Gaps = 21/660 (3%)
Query: 21 KMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIA 80
K P L+ GT+LT++AE G+LDPV+GRQ +IERV+QIL RRTKNNP LIGEPGVGKTAI
Sbjct: 173 KTPYLDALGTDLTEMAEAGRLDPVIGRQHEIERVIQILSRRTKNNPALIGEPGVGKTAIV 232
Query: 81 EGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFI 140
EGLAQRI +GDVPD+I+GK+V+TLDMG LVAGTKYRG+FEERLK++++EIK++ ILFI
Sbjct: 233 EGLAQRIVAGDVPDSIKGKRVVTLDMGALVAGTKYRGQFEERLKRVVDEIKET-RCILFI 291
Query: 141 DEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVK 200
DE HT+IGAG AEG +DAANILKP+L+RGELQ IGATTLDEYRK+IE+D ALERRFQPV
Sbjct: 292 DEFHTIIGAGGAEGTLDAANILKPALSRGELQTIGATTLDEYRKYIERDAALERRFQPVM 351
Query: 201 VPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEA 260
V +P+ +ETI+IL+G++ RYE H+L+ +DEA+ +AA LS +Y+ DRFLPDKAIDLIDEA
Sbjct: 352 VEQPTEEETIEILRGIKSRYEDFHQLQISDEAIKAAAHLSARYVPDRFLPDKAIDLIDEA 411
Query: 261 GSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVD 320
+RVR+ + P R+ + L I KE+ A+ Q FE A +LR+RE + A+I
Sbjct: 412 AARVRMTRSATPPSLRDALRGLEAIRKEREAAIEDQQFELAADLREREERMLARIQ---- 467
Query: 321 KGKEMSKAETEAGDVG--------PVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEE 372
K E E G +G P VTE DI +V WTGIPV+++ DE+ RLL+MEE
Sbjct: 468 ------KIEAELG-IGSDAHLMERPYVTEDDIAEVVGMWTGIPVKRLKGDETTRLLQMEE 520
Query: 373 TLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFG 432
LH RVIGQ EA+ IS+++RRAR GLK+P RPI SFIF GPTGVGK+ELAKALA + FG
Sbjct: 521 YLHSRVIGQHEAIVTISKSVRRARAGLKDPKRPIGSFIFLGPTGVGKTELAKALAEFMFG 580
Query: 433 SEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHP 492
SEE +I++DMSEF ERHT S+L+GSPPGYVGY EGGQLT+AVRR+PY+VVLFDEIEKAHP
Sbjct: 581 SEEHLIKIDMSEFQERHTTSRLVGSPPGYVGYGEGGQLTDAVRRKPYSVVLFDEIEKAHP 640
Query: 493 DVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSS 552
D FN++LQ+LEDG LTD KGR VDF+NT++IMTSNVG+ I + RIGF +
Sbjct: 641 DAFNLLLQVLEDGHLTDGKGRRVDFRNTIIIMTSNVGTEHIRRAS-RIGFSGYSSGSELD 699
Query: 553 YNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIEL 612
I+ V + LKQ FRPEFLNR+D I+F LT E+++I +MLK V D+LK ++ L
Sbjct: 700 NEDIRKKVDDALKQLFRPEFLNRIDATIIFHALTNDEIRQITRLMLKRVQDQLKEHNLTL 759
Query: 613 QVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGN 672
++T+ + + + GY+P+YGARPLRR I L+ED ++E +L + GD V+VDV + N
Sbjct: 760 EITDEACDLLAKRGYDPAYGARPLRRIITNLIEDPLSEGVLEGRFRSGDRVLVDVATLDN 819
>gi|389862461|ref|YP_006364701.1| ATP-dependent Clp protease ATP-binding subunit [Modestobacter
marinus]
gi|388484664|emb|CCH86202.1| ATP-dependent Clp protease ATP-binding subunit [Modestobacter
marinus]
Length = 847
Score = 780 bits (2014), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/691 (56%), Positives = 520/691 (75%), Gaps = 21/691 (3%)
Query: 11 AGVGGGSSGNKMPTL--EEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCL 68
A GG + G +L +++G NLT+ A +GKLDPV+GR +IERV+Q+L RRTKNNP L
Sbjct: 151 AAAGGPAEGTPSTSLVLDQFGRNLTQAARDGKLDPVIGRAKEIERVMQVLSRRTKNNPVL 210
Query: 69 IGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLME 128
IGEPGVGKTA EGLAQ I G+VP+T++ K++ TLD+G LVAG++YRG+FEERLKK+++
Sbjct: 211 IGEPGVGKTAAVEGLAQAIVKGEVPETLKDKQLYTLDLGALVAGSRYRGDFEERLKKVLK 270
Query: 129 EIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEK 188
EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEYRKH+EK
Sbjct: 271 EIRTRGDIILFIDEIHTLVGAGAAEGAIDAASILKPMLARGELQTIGATTLDEYRKHLEK 330
Query: 189 DPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRF 248
D ALERRFQP++V EP++ TI+ILKGLR+RYE HH++ TD ALV+AA L+ +YISDRF
Sbjct: 331 DAALERRFQPIQVSEPTLAHTIEILKGLRDRYEAHHRISITDNALVAAATLADRYISDRF 390
Query: 249 LPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDRE 308
LPDKAIDLIDEAG+R+R++ P + RE + + I +EK A+ QDFEKA LRD+E
Sbjct: 391 LPDKAIDLIDEAGARMRIKRMTAPPDLREFDDRISGIRREKESAIDAQDFEKAASLRDKE 450
Query: 309 MDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKVSTDESD 365
L + K + + +AGD+ VV EVD I +++ WTGIPV K++ +E+
Sbjct: 451 KQLLGE--------KSEREKQWKAGDMD-VVAEVDDEQIAEVLANWTGIPVFKLTEEETT 501
Query: 366 RLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKA 425
RLL+ME+ LHKR+IGQ+EA+K++S+AIRR R GLK+P RP SFIF+GP+GVGK+ELAKA
Sbjct: 502 RLLRMEDELHKRIIGQEEAIKSVSQAIRRTRAGLKDPRRPGGSFIFAGPSGVGKTELAKA 561
Query: 426 LAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFD 485
LA + FG ++A+I++DM EF ++ TVS+L+G+PPGYVGY EGGQLTE VRR+P++VVLFD
Sbjct: 562 LAQFLFGEDDALIQIDMGEFHDKFTVSRLVGAPPGYVGYDEGGQLTEKVRRKPFSVVLFD 621
Query: 486 EIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLD 545
EIEKAH DVFN +LQ+LEDGRLTD +GR VDFKNT+LI+T+N+G+ I K +GF
Sbjct: 622 EIEKAHADVFNTLLQVLEDGRLTDGQGRIVDFKNTILILTTNLGTRDISK-AVGLGFQSG 680
Query: 546 YDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRL 605
D S+Y R+K V EELKQ+FRPEFLNR+D+++VF QLT+ E+ I D+ML V +L
Sbjct: 681 NDTT-SNYERMKQKVNEELKQHFRPEFLNRIDDIVVFHQLTEDEIVHIVDLMLNRVETQL 739
Query: 606 KTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIV 665
KD+ L+VT ++ + G++P GARPLRR I R +ED+++EK+L EI G ++V
Sbjct: 740 SNKDMSLEVTPAAKKLLAARGFDPVLGARPLRRTIQREIEDTLSEKILYGEIASGQIIVV 799
Query: 666 DVDSDGNVT----VLNGSSGAPESLADPLPV 692
DV+ + + T G + P L D PV
Sbjct: 800 DVEENADPTQSTFTFRGEA-KPVDLPDTPPV 829
>gi|25029085|ref|NP_739139.1| endopeptidase Clp ATP-binding chain C [Corynebacterium efficiens
YS-314]
gi|259505920|ref|ZP_05748822.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
efficiens YS-314]
gi|23494372|dbj|BAC19339.1| putative endopeptidase Clp ATP-binding chain C [Corynebacterium
efficiens YS-314]
gi|259166401|gb|EEW50955.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
efficiens YS-314]
Length = 927
Score = 780 bits (2013), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 394/704 (55%), Positives = 530/704 (75%), Gaps = 27/704 (3%)
Query: 3 GESTEAVGAGV---------GGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIER 53
G+ +AVGAG G G N + L+++G NLT+ A++GKLDPVVGR +IER
Sbjct: 159 GQGGDAVGAGSAPGGRATGSGAGERSNSL-VLDQFGRNLTQAAKDGKLDPVVGRDKEIER 217
Query: 54 VVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGT 113
++Q+L RRTKNNP LIGEPGVGKTA+ EGLA I +G VP+T++ K+V +LD+G LVAG+
Sbjct: 218 IMQVLSRRTKNNPVLIGEPGVGKTAVVEGLALDIVNGKVPETLKDKQVYSLDLGSLVAGS 277
Query: 114 KYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQC 173
+YRG+FEERLKK+++EI Q +IILFIDE+HTL+GAGAAEGAIDAA++LKP LARGELQ
Sbjct: 278 RYRGDFEERLKKVLKEINQRGDIILFIDEIHTLVGAGAAEGAIDAASLLKPKLARGELQT 337
Query: 174 IGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEAL 233
IGATTLDEYRKHIEKD ALERRFQPV+VPEPSV+ +I+ILKGLR+RYE HH++ TD AL
Sbjct: 338 IGATTLDEYRKHIEKDAALERRFQPVQVPEPSVELSIEILKGLRDRYEAHHRVSITDGAL 397
Query: 234 VSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAV 293
V+AAQLS +YI+DRFLPDKA+DLIDEAG+R+R++ PE RE+++ + + +EK A+
Sbjct: 398 VAAAQLSDRYINDRFLPDKAVDLIDEAGARMRIKRMTAPESLREVDERIADVRREKEAAI 457
Query: 294 RGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETE--AGDVGPV--VTEVDIQHIVS 349
QDFEKA LRD+E L G+E ++ E + +GD+ + V E I +++
Sbjct: 458 DAQDFEKAAGLRDKERKL----------GEERAEKEKQWRSGDLEEIAEVGEEQIAEVLA 507
Query: 350 AWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASF 409
WTGIPV K++ ES RLL MEE LHKR+IGQDEAVKA+SRAIRR R GLK+P RP SF
Sbjct: 508 TWTGIPVFKLTEAESSRLLNMEEELHKRIIGQDEAVKAVSRAIRRTRAGLKDPKRPSGSF 567
Query: 410 IFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQ 469
IF+GP+GVGK+EL+KALA + FG ++++I++DM EF +R T S+L G+PPGYVGY EGGQ
Sbjct: 568 IFAGPSGVGKTELSKALAEFLFGDDDSLIQIDMGEFHDRFTASRLFGAPPGYVGYEEGGQ 627
Query: 470 LTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVG 529
LTE VRR+P++VVLFDEIEKAH +++N +LQ+LEDGRLTD +GR VDFKNT+LI TSN+G
Sbjct: 628 LTEKVRRKPFSVVLFDEIEKAHKEIYNTLLQVLEDGRLTDGQGRIVDFKNTVLIFTSNLG 687
Query: 530 SSVIEKGGRRIGFD-LDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKL 588
+ I K +GF + + D+ Y+R+K+ V +ELK++FRPEFLNR+DE++VF QLT+
Sbjct: 688 TQDISK-AVGLGFSGSNETDSDAQYDRMKNKVHDELKKHFRPEFLNRIDEIVVFHQLTRE 746
Query: 589 EVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSM 648
++ ++ ++++ V L KD+ +++T++ + + G++P GARPLRR I R +ED+M
Sbjct: 747 QIIQMVELLIGRVSRALADKDMGIELTDKAKALLASRGFDPVLGARPLRRTIQREIEDAM 806
Query: 649 AEKMLAREIKEGDSVIVDVDS-DGNVTVLNGSSGAPESLADPLP 691
+EK+L EI G+ V VDVD DG +G++ PLP
Sbjct: 807 SEKILFGEIGAGEIVTVDVDGWDGESKNTDGATFTFTPRPKPLP 850
>gi|284034301|ref|YP_003384232.1| ATPase AAA-2 domain-containing protein [Kribbella flavida DSM
17836]
gi|283813594|gb|ADB35433.1| ATPase AAA-2 domain protein [Kribbella flavida DSM 17836]
Length = 843
Score = 780 bits (2013), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 394/685 (57%), Positives = 523/685 (76%), Gaps = 20/685 (2%)
Query: 3 GESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRT 62
G+ T + GA G S + + L+++G N T+ A E KLDPV+GR+ +IERV+Q+L RRT
Sbjct: 147 GKETASAGAPAEGAPSSSLV--LDQFGRNYTQSARESKLDPVIGRETEIERVMQVLSRRT 204
Query: 63 KNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEER 122
KNNP LIGEPGVGKTAI EGLAQ+I GDVP+T++ K++ +LD+G LVAG++YRG+FEER
Sbjct: 205 KNNPVLIGEPGVGKTAIVEGLAQQIVRGDVPETLKDKQIYSLDLGALVAGSRYRGDFEER 264
Query: 123 LKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEY 182
LKK+++EI+ +I+LFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEY
Sbjct: 265 LKKVLKEIRTRGDIVLFIDEIHTLVGAGAAEGAIDAASILKPMLARGELQTIGATTLDEY 324
Query: 183 RKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQ 242
RK++EKD ALERRFQP++V EPS+ TI+ILKGLR+RYE HH++ TD ALV+AAQL+ +
Sbjct: 325 RKYVEKDAALERRFQPIQVAEPSIAHTIEILKGLRDRYEAHHRVTITDAALVNAAQLADR 384
Query: 243 YISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAG 302
YISDRFLPDKAIDLIDEAG+R+R+R P + RE ++++ + +EK A+ QDFE+A
Sbjct: 385 YISDRFLPDKAIDLIDEAGARLRIRRMTAPPDLREFDEKIANVRREKESAIDAQDFERAA 444
Query: 303 ELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKV 359
LRD E L I+A ++ K+ +AGD+ VV EVD I ++S TGIPV K+
Sbjct: 445 SLRDDEKKL---INAKAEREKQW-----KAGDM-DVVAEVDEELIAEVLSTATGIPVFKL 495
Query: 360 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 419
+ +ES RLL ME+ L KR +GQ +AVKA+SR+IRR R GLK+P RP SFIF+GP+GVGK
Sbjct: 496 TEEESSRLLDMEKELAKRYVGQTDAVKALSRSIRRTRAGLKDPRRPSGSFIFAGPSGVGK 555
Query: 420 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 479
+EL+KAL + FG E A+I LDMSE+ E+HT S+L GSPPGYVGY EGGQLTE VRR+P+
Sbjct: 556 TELSKALTEFLFGDESALISLDMSEYSEKHTASRLFGSPPGYVGYEEGGQLTEKVRRKPF 615
Query: 480 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 539
+VVLFDE+EKAHPD+FN +LQIL++GRLTD++GR VDFKNT++IMT+N+G+ I K
Sbjct: 616 SVVLFDEVEKAHPDIFNSLLQILDEGRLTDAQGRVVDFKNTVIIMTTNLGTRDIAK-AVS 674
Query: 540 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 599
+GF ++ SY ++K+ VTEELKQ+FRPEFLNR+DE++VF Q K E+ +I D+M+
Sbjct: 675 LGFS-QANDASGSYEKMKAKVTEELKQHFRPEFLNRVDEIVVFHQHGKDEIVKIVDLMIA 733
Query: 600 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 659
+V +RLK KD+ +++T + V + G++P GARPLRRA+ R +ED +AEK+L E++
Sbjct: 734 QVEERLKDKDMGIELTPAAKALVADRGFDPVLGARPLRRALQRDVEDVLAEKILFGELRP 793
Query: 660 GDSVIVDVDSDGNVTVLNGSSGAPE 684
G V+VD G V G G PE
Sbjct: 794 GQIVLVDAAPAGTV----GEDGLPE 814
>gi|238061431|ref|ZP_04606140.1| ATPase [Micromonospora sp. ATCC 39149]
gi|237883242|gb|EEP72070.1| ATPase [Micromonospora sp. ATCC 39149]
Length = 818
Score = 780 bits (2013), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/690 (57%), Positives = 533/690 (77%), Gaps = 24/690 (3%)
Query: 14 GGGSSGNKMPT----LEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLI 69
G ++G P+ L+++G NLT+ A EGKLDPV+GR+ +IERV+Q+L RRTKNNP LI
Sbjct: 132 AGTTTGEAAPSTSLVLDQFGRNLTQAAREGKLDPVIGREKEIERVMQVLSRRTKNNPVLI 191
Query: 70 GEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEE 129
GEPGVGKTA+ EGL+Q+I G+VP+T++ K++ TLD+G LVAG++YRG+FEERLKK+++E
Sbjct: 192 GEPGVGKTAVVEGLSQKIIKGEVPETLKDKQLYTLDLGALVAGSRYRGDFEERLKKVLKE 251
Query: 130 IKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKD 189
I+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEYRKH+EKD
Sbjct: 252 IRTRGDIILFIDEIHTLVGAGAAEGAIDAASILKPMLARGELQTIGATTLDEYRKHLEKD 311
Query: 190 PALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFL 249
ALERRFQP++V EPS+ TI+ILKGLR+RYE HH++ TD ALV+AA L+ +YISDRFL
Sbjct: 312 AALERRFQPIQVGEPSLAHTIEILKGLRDRYEAHHRVSITDAALVAAATLADRYISDRFL 371
Query: 250 PDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREM 309
PDKAIDLIDEAG+R+R+R P + R+ ++ + Q+ ++K A+ QDFE+A +LRD+E
Sbjct: 372 PDKAIDLIDEAGARMRIRRMTAPPDLRDFDERIAQVRRDKESAIDAQDFERAAQLRDKEK 431
Query: 310 DLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKVSTDESDR 366
L Q K + E +AGD+ VV+EVD I ++ WTGIPV K++ +E+ R
Sbjct: 432 QLLGQ--------KAQREKEWKAGDL-DVVSEVDDEQIAEVLGNWTGIPVYKLTEEETSR 482
Query: 367 LLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKAL 426
LL+ME+ LHKRVIGQ++AVKA+S+AIRR R GLK+P RP SFIF+GP+GVGK+EL+KAL
Sbjct: 483 LLRMEDELHKRVIGQEDAVKAVSKAIRRTRAGLKDPKRPSGSFIFAGPSGVGKTELSKAL 542
Query: 427 AAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDE 486
A + FGSE+A+I+LDMSEF +R+TVS+L+G+PPGYVGY EGGQLTE VRRRP++VVLFDE
Sbjct: 543 AEFLFGSEDALIQLDMSEFHDRYTVSRLVGAPPGYVGYDEGGQLTEKVRRRPFSVVLFDE 602
Query: 487 IEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDY 546
IEKAHPDVFN +LQILEDGRLTD +GR VDFKNT++I+T+N+G+ + K +GF
Sbjct: 603 IEKAHPDVFNTLLQILEDGRLTDGQGRIVDFKNTVIILTTNLGTRDVAK-AVSLGFQASE 661
Query: 547 DEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLK 606
D +S+Y+R+K V +ELKQ+FRPEFLNR+D+ IVF QL + E+ I DIM+ + +L+
Sbjct: 662 D-SESNYDRMKQKVNDELKQHFRPEFLNRIDDTIVFHQLRQGEILSIVDIMIARIETQLR 720
Query: 607 TKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVD 666
KD+ L++T+ ++ + ++G++P GARPLRR I R +ED+++E++L E+ G V+VD
Sbjct: 721 NKDMGLELTDNAKKYLAKKGFDPVLGARPLRRTIQRDIEDNLSERILFNELIPGQIVVVD 780
Query: 667 V-----DSDGNVTVLNGSSGAPESLADPLP 691
D D + V GS P + D +P
Sbjct: 781 CEGDPEDIDKSKLVFRGSD-RPAEVPDAIP 809
>gi|392945929|ref|ZP_10311571.1| ATPase with chaperone activity, ATP-binding subunit [Frankia sp.
QA3]
gi|392289223|gb|EIV95247.1| ATPase with chaperone activity, ATP-binding subunit [Frankia sp.
QA3]
Length = 834
Score = 780 bits (2013), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/674 (59%), Positives = 524/674 (77%), Gaps = 18/674 (2%)
Query: 24 TLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGL 83
L+++G NLT A E KLDPV+GR+ +IERV+Q+L RRTKNNP LIGEPGVGKTA+ EGL
Sbjct: 167 VLDQFGRNLTAAARESKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGL 226
Query: 84 AQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEV 143
AQ I G+VP+T++ K++ TLD+G LVAG++YRG+FEERLKK+++EI+ +IILFIDE+
Sbjct: 227 AQAIVKGEVPETLKDKQLYTLDLGALVAGSRYRGDFEERLKKVLKEIRTRGDIILFIDEL 286
Query: 144 HTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPE 203
HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEYRKH+EKD ALERRFQP++V E
Sbjct: 287 HTLVGAGAAEGAIDAASILKPMLARGELQTIGATTLDEYRKHLEKDAALERRFQPIQVAE 346
Query: 204 PSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSR 263
PSV TI+ILKGLR+RYE HH++ TD ALV+AA L+ +YISDRFLPDKAIDLIDEAGSR
Sbjct: 347 PSVAHTIEILKGLRDRYEAHHRVSITDAALVAAASLADRYISDRFLPDKAIDLIDEAGSR 406
Query: 264 VRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGK 323
+R+R P + RE ++ + + ++K A+ QDFEKA LRD+E L L +K K
Sbjct: 407 MRIRRMTAPPDLREFDERIAGVRRDKESAIDAQDFEKAASLRDKEKTL------LSEKAK 460
Query: 324 EMSKAETEAGDVGPVVTEV---DIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIG 380
+ E +AGD+ VV EV +I +++ WTGIPV K++ +E+ RLL+ME+ LH+RVIG
Sbjct: 461 R--EKEWKAGDM-DVVAEVGDEEIAEVLAIWTGIPVFKLTEEETARLLRMEDELHRRVIG 517
Query: 381 QDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRL 440
Q +A+KA+S+AIRR R GLK+P RP SFIF+GP+GVGK+EL+K LA + FG E+A+I+L
Sbjct: 518 QQQAIKAVSQAIRRTRAGLKDPKRPGGSFIFAGPSGVGKTELSKTLAEFLFGDEDALIQL 577
Query: 441 DMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQ 500
DMSE+ME+HTVS+L+GSPPGYVGY EGGQLTE VRR+P++VVLFDE+EKAHPDVFN +LQ
Sbjct: 578 DMSEYMEKHTVSRLVGSPPGYVGYEEGGQLTERVRRKPFSVVLFDEVEKAHPDVFNTLLQ 637
Query: 501 ILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLV 560
ILEDGRLTDS+GR VDFKNT+LIMTSN+G+ I KG IGF + D Y R+K+ V
Sbjct: 638 ILEDGRLTDSQGRLVDFKNTVLIMTSNLGTRDISKGP-GIGFATGQGQVD--YERMKAKV 694
Query: 561 TEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRE 620
+ELKQ+FRPEFLNR+D++IVF QL++ E+ +I D+ML V +LK KD+ L++T +
Sbjct: 695 QDELKQHFRPEFLNRIDDIIVFHQLSENEIIQIVDLMLARVDVQLKNKDMALELTSAAKA 754
Query: 621 RVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVT--VLNG 678
+ ++GY+P GARPLRR I R +ED ++EK+L +K G+ V+ DV+ +G+ V G
Sbjct: 755 LLAKKGYDPVLGARPLRRTIQREIEDVLSEKILYGTLKPGEIVVGDVEGEGDDAKFVFRG 814
Query: 679 SSGAPESLADPLPV 692
+ P + D PV
Sbjct: 815 ET-KPNQVPDAPPV 827
>gi|111226012|ref|YP_716806.1| ATP-dependent protease [Frankia alni ACN14a]
gi|111153544|emb|CAJ65303.1| ATP-dependent protease, Hsp 100, part of multi-chaperone system
with DnaK, DnaJ, and GrpE [Frankia alni ACN14a]
Length = 834
Score = 779 bits (2012), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/674 (59%), Positives = 523/674 (77%), Gaps = 18/674 (2%)
Query: 24 TLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGL 83
L+++G NLT A E KLDPV+GR+ +IERV+Q+L RRTKNNP LIGEPGVGKTA+ EGL
Sbjct: 167 VLDQFGRNLTAAARESKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGL 226
Query: 84 AQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEV 143
AQ I G+VP+T++ K++ TLD+G LVAG++YRG+FEERLKK+++EI+ +IILFIDE+
Sbjct: 227 AQAIVKGEVPETLKDKQLYTLDLGALVAGSRYRGDFEERLKKVLKEIRTRGDIILFIDEL 286
Query: 144 HTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPE 203
HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEYRKH+EKD ALERRFQP++V E
Sbjct: 287 HTLVGAGAAEGAIDAASILKPMLARGELQTIGATTLDEYRKHLEKDAALERRFQPIQVAE 346
Query: 204 PSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSR 263
PSV TI+ILKGLR+RYE HH++ TD ALV+AA L+ +YISDRFLPDKAIDLIDEAGSR
Sbjct: 347 PSVAHTIEILKGLRDRYEAHHRVSITDAALVAAASLADRYISDRFLPDKAIDLIDEAGSR 406
Query: 264 VRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGK 323
+R+R P + RE ++ + + ++K A+ QDFEKA LRD+E L L +K K
Sbjct: 407 MRIRRMTAPPDLREFDERIAGVRRDKESAIDAQDFEKAASLRDKEKTL------LSEKAK 460
Query: 324 EMSKAETEAGDVGPVVTEV---DIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIG 380
+ E +AGD+ VV EV +I +++ WTGIPV K++ +E+ RLL+ME+ LHKRVIG
Sbjct: 461 R--EKEWKAGDM-DVVAEVGDEEIAEVLAIWTGIPVFKLTEEETARLLRMEDELHKRVIG 517
Query: 381 QDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRL 440
Q +A+KA+S+AIRR R GLK+P RP SFIF+GP+GVGK+EL+K LA + FG E+A+I+L
Sbjct: 518 QQQAIKAVSQAIRRTRAGLKDPKRPGGSFIFAGPSGVGKTELSKTLAEFLFGDEDALIQL 577
Query: 441 DMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQ 500
DMSE+ME+HTVS+L+GSPPGYVGY EGGQLTE VRR+P++VVLFDE+EKAHPDVFN +LQ
Sbjct: 578 DMSEYMEKHTVSRLVGSPPGYVGYEEGGQLTERVRRKPFSVVLFDEVEKAHPDVFNTLLQ 637
Query: 501 ILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLV 560
ILEDGRLTDS+GR VDFKNT+LIMTSN+G+ I KG IGF D Y R+K+ V
Sbjct: 638 ILEDGRLTDSQGRLVDFKNTVLIMTSNLGTRDISKGP-GIGFATGQGAVD--YERMKAKV 694
Query: 561 TEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRE 620
+ELKQ+FRPEFLNR+D++IVF QL++ E+ +I D+ML V +LK KD+ L++T +
Sbjct: 695 QDELKQHFRPEFLNRIDDIIVFHQLSENEIIQIVDLMLARVDIQLKNKDMALELTSAAKA 754
Query: 621 RVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVT--VLNG 678
+ ++GY+P GARPLRR I R +ED ++EK+L +K G+ V+ DV+ +G+ V G
Sbjct: 755 LLAKKGYDPVLGARPLRRTIQREIEDVLSEKILYGTLKPGEIVVGDVEGEGDDAKFVFRG 814
Query: 679 SSGAPESLADPLPV 692
+ P + D PV
Sbjct: 815 ET-KPNQVPDAPPV 827
>gi|330470478|ref|YP_004408221.1| ATPase aaa-2 domain-containing protein [Verrucosispora maris
AB-18-032]
gi|328813449|gb|AEB47621.1| atpase aaa-2 domain protein [Verrucosispora maris AB-18-032]
Length = 846
Score = 779 bits (2012), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/673 (58%), Positives = 525/673 (78%), Gaps = 15/673 (2%)
Query: 3 GESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRT 62
G+ A G G + + L+++G NLT+ A EGKLDPV+GR+ +IERV+Q+L RRT
Sbjct: 147 GKEPAAAGTAPGEAAPSTSL-VLDQFGRNLTQAAREGKLDPVIGREKEIERVMQVLSRRT 205
Query: 63 KNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEER 122
KNNP LIGEPGVGKTA+ EGL+Q+I G+VP+T++ K++ TLD+G LVAG++YRG+FEER
Sbjct: 206 KNNPVLIGEPGVGKTAVVEGLSQKIIKGEVPETLKDKQLYTLDLGALVAGSRYRGDFEER 265
Query: 123 LKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEY 182
LKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEY
Sbjct: 266 LKKVLKEIRTRGDIILFIDEIHTLVGAGAAEGAIDAASILKPMLARGELQTIGATTLDEY 325
Query: 183 RKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQ 242
RKH+EKD ALERRFQP++V EPS+ TI+ILKGLR+RYE HH++ TD ALV+AA L+ +
Sbjct: 326 RKHLEKDAALERRFQPIQVGEPSLAHTIEILKGLRDRYEAHHRVSITDAALVAAATLADR 385
Query: 243 YISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAG 302
YISDRFLPDKAIDLIDEAG+R+R+R P + R+ ++ + Q+ ++K A+ QDFE+A
Sbjct: 386 YISDRFLPDKAIDLIDEAGARMRIRRMTAPPDLRDFDERIAQVRRDKESAIDAQDFERAA 445
Query: 303 ELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKV 359
+LRD+E L Q K + E +AGD+ VV+EVD I ++ WTGIPV K+
Sbjct: 446 QLRDKEKQLLGQ--------KAQREKEWKAGDL-DVVSEVDDEQIAEVLGNWTGIPVYKL 496
Query: 360 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 419
+ +E+ RLL+ME+ LHKRVIGQ++AVKA+S+AIRR R GLK+P RP SFIF+GP+GVGK
Sbjct: 497 TEEETSRLLRMEDELHKRVIGQEDAVKAVSKAIRRTRAGLKDPKRPSGSFIFAGPSGVGK 556
Query: 420 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 479
+EL+KALA + FGSE+A+I+LDMSEF +R+TVS+L+G+PPGYVGY EGGQLTE VRRRP+
Sbjct: 557 TELSKALAEFLFGSEDALIQLDMSEFHDRYTVSRLVGAPPGYVGYDEGGQLTEKVRRRPF 616
Query: 480 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 539
+VVLFDEIEKAHPDVFN +LQILEDGRLTD +GR VDFKNT++I+T+N+G+ + K
Sbjct: 617 SVVLFDEIEKAHPDVFNTLLQILEDGRLTDGQGRIVDFKNTVIILTTNLGTRDVAK-AVS 675
Query: 540 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 599
+GF D +S+Y+R+K V +ELKQ+FRPEFLNR+D+ IVF QL + E+ I DIM+
Sbjct: 676 LGFQASED-SESNYDRMKQKVNDELKQHFRPEFLNRIDDTIVFHQLRQQEILSIVDIMIA 734
Query: 600 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 659
+ +L+ KD+ L++T+ ++ + +G++P GARPLRR I R +ED+++E++L E+
Sbjct: 735 RIETQLRNKDMGLELTDNAKKYLAAKGFDPVLGARPLRRTIQRDIEDNLSERILFNELIP 794
Query: 660 GDSVIVDVDSDGN 672
G V+VD + D N
Sbjct: 795 GQIVVVDCEGDPN 807
>gi|392423650|ref|YP_006464644.1| ATPase with chaperone activity, ATP-binding subunit
[Desulfosporosinus acidiphilus SJ4]
gi|391353613|gb|AFM39312.1| ATPase with chaperone activity, ATP-binding subunit
[Desulfosporosinus acidiphilus SJ4]
Length = 813
Score = 779 bits (2012), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/648 (60%), Positives = 511/648 (78%), Gaps = 9/648 (1%)
Query: 23 PTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEG 82
P+L E+G +LT+ A EG+LDPV+GR+ +IERV+Q+L RRTKNNP LIGEPGVGKTAIAEG
Sbjct: 168 PSLNEFGRDLTQQAREGRLDPVIGREKEIERVIQVLSRRTKNNPALIGEPGVGKTAIAEG 227
Query: 83 LAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDE 142
LAQ I + VP+ + K+VITLD+ +VAG+KYRGEFEERLKK+M+EI+ IILFIDE
Sbjct: 228 LAQGIINNRVPEILINKRVITLDLSAMVAGSKYRGEFEERLKKVMDEIRADGNIILFIDE 287
Query: 143 VHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVP 202
+HTLIGAGAAEGAIDAANILKP+LARGELQCIGATTL+EYRK+IEKD ALERRFQP+ V
Sbjct: 288 LHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLEEYRKYIEKDSALERRFQPITVS 347
Query: 203 EPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGS 262
EP+V+E I IL+GLR+RYE HH+++ TDEA+ SA +LS +Y+SDRFLPDKAIDL+DEA S
Sbjct: 348 EPTVEEAILILRGLRDRYEAHHRVKITDEAIESAVRLSDRYVSDRFLPDKAIDLMDEAAS 407
Query: 263 RVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKG 322
+VRL P + + LE E+ ++ KEK AV GQ+FEKA +LRD E LK +++
Sbjct: 408 KVRLTSYIAPPDLKSLEGEIERLKKEKEAAVAGQEFEKAAQLRDSEHKLKEELA------ 461
Query: 323 KEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQD 382
K+ + E++ +V E DI +V++WTGIPV+K++ ES+RLL +EE LHKRVIGQD
Sbjct: 462 KQREEWESKRQKENSMVLEDDIAQVVASWTGIPVKKLAQAESERLLNLEEILHKRVIGQD 521
Query: 383 EAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDM 442
+AV A++RA+RRAR GLK+P RPI SFIF GPTGVGK+EL ++LA FG E+A+IR+DM
Sbjct: 522 DAVTAVARAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELGRSLAEAMFGDEKALIRIDM 581
Query: 443 SEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQIL 502
SE+ME+H VS+L+G+PPGYVG+ EGGQLTEAVRR+PY+V+L DEIEKAHP+VFN++LQ+L
Sbjct: 582 SEYMEKHAVSRLVGAPPGYVGHDEGGQLTEAVRRKPYSVILLDEIEKAHPEVFNILLQVL 641
Query: 503 EDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTE 562
EDGRLTD+KGRTVDF+NT++IMTSNVGSS + K +GF DEK + Y ++ V E
Sbjct: 642 EDGRLTDTKGRTVDFRNTVIIMTSNVGSSFLRKEA--MGFAAQKDEK-TEYKNMRGQVME 698
Query: 563 ELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERV 622
ELK+ FRPEFLNR+DE++VF L K + +I +I+ ++ RLK +ELQ+ E +
Sbjct: 699 ELKRTFRPEFLNRIDELVVFHSLKKEHLAKITEILALQMNKRLKEYGLELQIDSSVIELI 758
Query: 623 VEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSD 670
+EG +P++GARPLRR+I RL+ED+++EK+L E K GD + + D
Sbjct: 759 AKEGNDPTFGARPLRRSIQRLIEDALSEKILQGEFKVGDKICAQAEQD 806
>gi|299821023|ref|ZP_07052911.1| ATPase with chaperone activity, ATP-binding subunit [Listeria grayi
DSM 20601]
gi|299816688|gb|EFI83924.1| ATPase with chaperone activity, ATP-binding subunit [Listeria grayi
DSM 20601]
Length = 821
Score = 779 bits (2012), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/660 (59%), Positives = 513/660 (77%), Gaps = 9/660 (1%)
Query: 10 GAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLI 69
A G ++ PTL+ +LT +A E LDPV+GR +I+RV+++L RRTKNNP LI
Sbjct: 147 AASAGRQTNTQATPTLDSLARDLTVIAREENLDPVIGRAKEIQRVIEVLSRRTKNNPVLI 206
Query: 70 GEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEE 129
GEPGVGKTAIAEGLAQ+I +VP+T+ GK+V+TLDMG +VAGTKYRGEFE+RLKK+M+E
Sbjct: 207 GEPGVGKTAIAEGLAQQIVKNEVPETLRGKRVMTLDMGTVVAGTKYRGEFEDRLKKVMDE 266
Query: 130 IKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKD 189
I+Q+ +ILFIDE+HTLIGAG AEGAIDA+NILKP LARGELQCIGATTLDEYRK+IEKD
Sbjct: 267 IRQAGNVILFIDELHTLIGAGGAEGAIDASNILKPPLARGELQCIGATTLDEYRKYIEKD 326
Query: 190 PALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFL 249
ALERRFQPVKV EP+VDE+IQIL GLR+RYE HH++ TD AL +A +LS +YISDRFL
Sbjct: 327 AALERRFQPVKVDEPTVDESIQILHGLRDRYEAHHRVAITDSALEAAVRLSDRYISDRFL 386
Query: 250 PDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREM 309
PDKAID+IDEAGS+VRL+ P +++E+EL ++ KEK+ AV+GQ+FEKA LRD+E
Sbjct: 387 PDKAIDVIDEAGSKVRLKAYTTPSNVKQMEEELAELKKEKDAAVQGQEFEKAASLRDKEQ 446
Query: 310 DLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLK 369
LK ++ S + + G VTE + +V++WTGIPV K++ E+D+LL
Sbjct: 447 KLKKELEK------TKSTWQQKQGMDHNEVTEDIVAEVVASWTGIPVMKLAETETDKLLN 500
Query: 370 MEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAY 429
ME+ LH+RVIGQ+ AVKA+S A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+ALA
Sbjct: 501 MEKLLHQRVIGQESAVKAVSLAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAES 560
Query: 430 YFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEK 489
FG EEAMIR+DMSE+ME+ + ++L+GSPPGYVGY EGGQLTE VR++PY+V+L DEIEK
Sbjct: 561 MFGDEEAMIRIDMSEYMEKFSTARLVGSPPGYVGYEEGGQLTEKVRQKPYSVILLDEIEK 620
Query: 490 AHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEK 549
AHPDVFNM+LQ+L+DGRLTDSKGR VDF+NT++IMTSNVG+ +++ + +GF + K
Sbjct: 621 AHPDVFNMLLQVLDDGRLTDSKGRVVDFRNTVIIMTSNVGAREMQQ-DKSVGFLVTDPRK 679
Query: 550 DSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKD 609
D + ++ V +ELKQ FRPEF+NR+DE IVF L E+KEI ++ K++ RL +D
Sbjct: 680 D--HKAMEQRVLQELKQVFRPEFINRIDETIVFHALQDKELKEIVTLLTKQLTKRLAAQD 737
Query: 610 IELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDS 669
I + +TE + ++ ++GY+P YGARPL+RAI R +ED ++E++L +I GD+V + V +
Sbjct: 738 IHVTLTEGAKAKIAKDGYDPEYGARPLKRAIQRNIEDRLSEELLRGKIVVGDAVEIGVKA 797
>gi|22255857|gb|AAM94782.1| CalR4 [Micromonospora echinospora]
Length = 797
Score = 779 bits (2011), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/676 (57%), Positives = 527/676 (77%), Gaps = 22/676 (3%)
Query: 24 TLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGL 83
L+++G NLT+ A EGKLDPV+GR+ +IERV+Q+L RRTKNNP LIGEPGVGKTA+ EGL
Sbjct: 129 VLDQFGRNLTQAAREGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGL 188
Query: 84 AQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEV 143
+Q+I G+VP+T++ K++ TLD+G LVAG++YRG+FEERLKK+++EI+ +IILFIDE+
Sbjct: 189 SQKIIKGEVPETLKDKQLYTLDLGALVAGSRYRGDFEERLKKVLKEIRTRGDIILFIDEI 248
Query: 144 HTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPE 203
HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEYRKH+EKD ALERRFQP++V E
Sbjct: 249 HTLVGAGAAEGAIDAASILKPMLARGELQTIGATTLDEYRKHLEKDAALERRFQPIQVGE 308
Query: 204 PSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSR 263
PS+ TI+ILKGLR+RYE HH++ TD ALV+AA L+ +YISDRFLPDKAIDLIDEAG+R
Sbjct: 309 PSLAHTIEILKGLRDRYEAHHRVSITDAALVAAATLADRYISDRFLPDKAIDLIDEAGAR 368
Query: 264 VRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGK 323
+R+R P + R+ ++ + Q+ ++K A+ QDFE+A +LRD+E L Q K
Sbjct: 369 MRIRRMTAPPDLRDFDERIAQVRRDKESAIDAQDFERAAQLRDKEKQLLGQ--------K 420
Query: 324 EMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIG 380
+ E +AGD+ VV+EVD I ++ WTGIPV K++ +E+ RLL+ME+ LHKRVIG
Sbjct: 421 AQREKEWKAGDLD-VVSEVDDEQIAEVLGNWTGIPVYKLTEEETSRLLRMEDELHKRVIG 479
Query: 381 QDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRL 440
Q++AVKA+S+AIRR R GLK+P RP SFIF+GP+GVGK+EL+KALA + FGSE+A+I+L
Sbjct: 480 QEDAVKAVSKAIRRTRAGLKDPKRPSGSFIFAGPSGVGKTELSKALAEFLFGSEDALIQL 539
Query: 441 DMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQ 500
DMSEF +R+TVS+L+G+PPGYVGY EGGQLTE VRRRP++VVLFDEIEKAHPDVFN +LQ
Sbjct: 540 DMSEFHDRYTVSRLVGAPPGYVGYDEGGQLTEKVRRRPFSVVLFDEIEKAHPDVFNTLLQ 599
Query: 501 ILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLV 560
ILEDGRLTD +GR VDFKNT++I+T+N+G+ + K +GF D +S+Y+R+K V
Sbjct: 600 ILEDGRLTDGQGRIVDFKNTVIILTTNLGTRDVAK-AVSLGFQASED-SESNYDRMKQKV 657
Query: 561 TEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRE 620
+ELKQ+FRPEFLNR+D+ IVF QL + E+ I DIM+ + +L+ KD+ L++T+ ++
Sbjct: 658 NDELKQHFRPEFLNRIDDTIVFHQLRENEILSIVDIMIARIETQLRNKDMGLELTDNAKK 717
Query: 621 RVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVT-----V 675
+ ++G++P GARPLRR I R +ED+++E++L E+ G V+VD + D + T V
Sbjct: 718 YLAKKGFDPVLGARPLRRTIQRDIEDNLSERILFNELTPGQIVVVDCEGDPSNTAKSKLV 777
Query: 676 LNGSSGAPESLADPLP 691
G+ P P+P
Sbjct: 778 FRGADKPPTG---PVP 790
>gi|444433681|ref|ZP_21228818.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Gordonia soli
NBRC 108243]
gi|443885471|dbj|GAC70539.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Gordonia soli
NBRC 108243]
Length = 828
Score = 779 bits (2011), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/695 (57%), Positives = 526/695 (75%), Gaps = 25/695 (3%)
Query: 11 AGVGGGSSGNKMPT----LEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNP 66
AG GG SS P+ L+++G NLT A EGKLDPV+GR+ +IERV+Q+L RRTKNNP
Sbjct: 132 AGTGGRSSEAGTPSTSLVLDQFGRNLTAAAGEGKLDPVIGREKEIERVMQVLSRRTKNNP 191
Query: 67 CLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKL 126
LIGEPGVGKTA+ EGLAQ I +G VP+T++ K++ TLD+G LVAG++YRG+FEERLKK+
Sbjct: 192 VLIGEPGVGKTAVVEGLAQAIVNGKVPETLKDKQLYTLDLGSLVAGSRYRGDFEERLKKV 251
Query: 127 MEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHI 186
++EI +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEYRK+I
Sbjct: 252 LKEINTRGDIILFIDELHTLVGAGAAEGAIDAASILKPKLARGELQTIGATTLDEYRKYI 311
Query: 187 EKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISD 246
EKD ALERRFQPV+V EPSV+ TI+ILKGLR+RYE HH++ TD ALV+AA L+ +YI+D
Sbjct: 312 EKDAALERRFQPVQVGEPSVEHTIEILKGLRDRYESHHRVSITDGALVAAATLADRYIND 371
Query: 247 RFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRD 306
RFLPDKAIDLIDEAG+R+R+R P + RE + + + KEK A+ QDFEKA LRD
Sbjct: 372 RFLPDKAIDLIDEAGARMRIRRMTAPPDLREFDDRIAEARKEKESAIDAQDFEKAANLRD 431
Query: 307 REMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKVSTDE 363
+E LV + E K + +GD+ VV EVD I ++ WTGIPV K++ +E
Sbjct: 432 KE-------KQLVGERAEREK-QWRSGDM-DVVAEVDDEQIAEVLGNWTGIPVFKLTEEE 482
Query: 364 SDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELA 423
+ RLL+ME+ LHKR+IGQ++AVKA+S+AIRR R GLK+P RP SFIF+GP+GVGK+EL+
Sbjct: 483 TTRLLRMEDELHKRIIGQEDAVKAVSKAIRRTRAGLKDPKRPSGSFIFAGPSGVGKTELS 542
Query: 424 KALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVL 483
KALA + FG ++A+I++DM EF +R T S+L G+PPGYVGY EGGQLTE VRR+P++VVL
Sbjct: 543 KALANFLFGEDDALIQIDMGEFHDRFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVVL 602
Query: 484 FDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFD 543
FDEIEKAH +++N +LQ+LEDGRLTD +GRTVDFKNT+LI TSN+G+S I K +GF
Sbjct: 603 FDEIEKAHSEIYNTLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGTSDISK-AVGLGFS 661
Query: 544 LDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFD 603
D K S+Y R+K V +ELK++FRPEFLNR+D++IVF QLT+ E+ ++ D+M+ V
Sbjct: 662 SGDDSK-SNYERMKLKVNDELKKHFRPEFLNRIDDVIVFHQLTQDEIIQMVDLMIGRVEA 720
Query: 604 RLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSV 663
+LK KD+++++T++ + + G++P GARPLRR I R +ED ++EK+L E+ G V
Sbjct: 721 QLKNKDMDIELTDQAKNLLARRGFDPVLGARPLRRTIQREIEDQLSEKILFNELTAGQIV 780
Query: 664 IVDVDS-DG-----NVTVLNGSSGAPESLADPLPV 692
+VDVD DG + T S P L D +PV
Sbjct: 781 VVDVDGWDGEGDGEDATFTFAGSDRPRELPD-VPV 814
>gi|407985354|ref|ZP_11165952.1| istB-like ATP binding family protein [Mycobacterium hassiacum DSM
44199]
gi|407373047|gb|EKF22065.1| istB-like ATP binding family protein [Mycobacterium hassiacum DSM
44199]
Length = 822
Score = 778 bits (2009), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/647 (58%), Positives = 511/647 (78%), Gaps = 15/647 (2%)
Query: 25 LEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLA 84
L+++G NLT A EGKLDPV+GR+ +IERV+Q+L RRTKNNP LIGEPGVGKTA+ EGLA
Sbjct: 150 LDQFGRNLTAAAAEGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLA 209
Query: 85 QRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVH 144
Q I +GDVP+T++ K++ TLD+G LVAG++YRG+FEERLKK+++EI +IILFIDE+H
Sbjct: 210 QAIVNGDVPETLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDELH 269
Query: 145 TLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEP 204
TL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEYRK+IEKD ALERRFQPV+V EP
Sbjct: 270 TLVGAGAAEGAIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEP 329
Query: 205 SVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRV 264
+V+ T++ILKGLR+RYE HH++ TD+A+V+AA L+ +YI+DR+LPDKAIDLIDEAG+R+
Sbjct: 330 TVEHTVEILKGLRDRYEAHHRVSITDDAIVAAATLADRYINDRYLPDKAIDLIDEAGARM 389
Query: 265 RLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKE 324
R+R P + RE ++++ + +EK A+ QDFEKA LRD+E L AQ +
Sbjct: 390 RIRRMTAPPDLREFDEKIAEARREKESAIDAQDFEKAAALRDKEKQLVAQ--------RA 441
Query: 325 MSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQ 381
+ + +GD+ VV EVD I +++ WTGIPV K++ E+ RLL+MEE LHKR+IGQ
Sbjct: 442 EREKQWRSGDL-DVVAEVDDEQIAEVLANWTGIPVFKLTEAETTRLLRMEEELHKRIIGQ 500
Query: 382 DEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLD 441
++AVKA+S+AIRR R GLK+P RP SFIF+GP+GVGK+EL+KALA + FG E+A+I++D
Sbjct: 501 EDAVKAVSKAIRRTRAGLKDPKRPSGSFIFAGPSGVGKTELSKALAEFLFGDEDALIQID 560
Query: 442 MSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQI 501
M E+ +R T S+L G+PPGYVGY EGGQLTE VRR+P++VVLFDEIEKAHP+++N +LQ+
Sbjct: 561 MGEYHDRFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHPEIYNTLLQV 620
Query: 502 LEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVT 561
LEDGRLTD +GRTVDFKNT+LI TSN+G+S I K +G ++ Y R+K V
Sbjct: 621 LEDGRLTDGQGRTVDFKNTVLIFTSNLGTSDISKA---VGLGFSKGGGENDYERMKQKVH 677
Query: 562 EELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRER 621
+ELK++FRPEFLNR+D++IVF QLT+ ++ ++ D+M+ V ++LK KD++L +TE+ ++
Sbjct: 678 DELKKHFRPEFLNRIDDIIVFHQLTQEQIIQMVDLMVGRVANQLKAKDMDLVLTEKAKKL 737
Query: 622 VVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVD 668
+ + G++P GARPLRR I R +ED ++EK+L E++ G V VDV+
Sbjct: 738 LAQRGFDPVLGARPLRRTIQREIEDQLSEKILFEELRPGQLVTVDVE 784
>gi|83589034|ref|YP_429043.1| ATPases with chaperone activity, ATP-binding subunit [Moorella
thermoacetica ATCC 39073]
gi|83571948|gb|ABC18500.1| ATPases with chaperone activity, ATP-binding subunit [Moorella
thermoacetica ATCC 39073]
Length = 840
Score = 778 bits (2009), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/656 (60%), Positives = 521/656 (79%), Gaps = 10/656 (1%)
Query: 21 KMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIA 80
+ PTL+++ +LT+LA E KLDPVVGR+ +IERVVQIL RRTKNNP LIG+PGVGKTAI
Sbjct: 190 QTPTLDQFSRDLTRLAREDKLDPVVGREKEIERVVQILSRRTKNNPVLIGDPGVGKTAIV 249
Query: 81 EGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFI 140
EGLAQ+I VP+ + K+V+ LDM +VAGTKYRGEFEER KK+M+E++ + +ILFI
Sbjct: 250 EGLAQKIVQNQVPEVLRDKRVVALDMSGMVAGTKYRGEFEERFKKVMDEVRAAGNVILFI 309
Query: 141 DEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVK 200
DE+HTLIGAGAAEGAIDAANILKP+LARGELQ IGATT+DEYRKHIE+D ALERRFQ V
Sbjct: 310 DELHTLIGAGAAEGAIDAANILKPALARGELQTIGATTIDEYRKHIERDAALERRFQAVM 369
Query: 201 VPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEA 260
V EP+V+ETI ILKGLR+RYE HH+++ TDEAL +AA+LS +YI+DR+LPDKAIDL+DEA
Sbjct: 370 VEEPTVEETIAILKGLRDRYEAHHRVKITDEALEAAARLSDRYITDRYLPDKAIDLVDEA 429
Query: 261 GSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVD 320
GSRVRL+ P++ ++LE L ++ KEK AV Q+FEKA LRD E +K ++
Sbjct: 430 GSRVRLKVYTAPDDVKKLEARLEELEKEKAAAVNAQEFEKAATLRDEEKKIKEELE---- 485
Query: 321 KGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIG 380
+ + + E G VVT DI IVS+WTGIPV +++ +ES+RLL +E+ LH+RVIG
Sbjct: 486 --AKKGEWQKEKGLEKSVVTPEDIAQIVSSWTGIPVTQLAQEESERLLHLEDVLHQRVIG 543
Query: 381 QDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRL 440
QDEAV A++RA+RRAR GLK+P RPI SFIF GPTGVGK+ELA+ALA FG E+AM+R
Sbjct: 544 QDEAVHAVARAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAEALFGDEDAMVRF 603
Query: 441 DMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQ 500
DMSE+ME+HTVS+L+G+PPGYVGY E GQLTEAVRRRPY+VVLFDEIEKAHPD+FN++LQ
Sbjct: 604 DMSEYMEKHTVSRLVGAPPGYVGYEESGQLTEAVRRRPYSVVLFDEIEKAHPDIFNVLLQ 663
Query: 501 ILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDS-SYNRIKSL 559
+L+DGRLTD+KGRTVDF+NT++IMTSN+G+S I++ +GF E + SY+++K
Sbjct: 664 VLDDGRLTDAKGRTVDFRNTVIIMTSNIGASTIKR--ESLGFKASTSEVAAESYDKMKKH 721
Query: 560 VTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFR 619
+ EEL++ FRPEFLNR+D++IVF L++ ++++I D+ML E+ RL+ ++ ++VT+ +
Sbjct: 722 ILEELRRTFRPEFLNRIDDLIVFHALSRDDIRKIVDLMLAELNRRLEDNNLSVEVTDEAK 781
Query: 620 ERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTV 675
+ +V EG++ +YGARPLRRAI L+ED ++++MLA + K GD V V DG + +
Sbjct: 782 DILVREGFDEAYGARPLRRAIQTLIEDQLSDEMLAGKFKPGDKVRA-VARDGKIAL 836
>gi|359421709|ref|ZP_09213621.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Gordonia araii
NBRC 100433]
gi|358242425|dbj|GAB11690.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Gordonia araii
NBRC 100433]
Length = 848
Score = 778 bits (2009), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/664 (59%), Positives = 517/664 (77%), Gaps = 18/664 (2%)
Query: 11 AGVGGGSSGNKMPT----LEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNP 66
AG GG S+ P+ L+++G NLT A EGKLDPV+GR+ +IERV+Q+L RRTKNNP
Sbjct: 153 AGTGGRSTEAGTPSTSLVLDQFGRNLTAAAGEGKLDPVIGRENEIERVMQVLSRRTKNNP 212
Query: 67 CLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKL 126
LIGEPGVGKTA+ EGLAQ I +GDVP+T++ K++ TLD+G LVAG++YRG+FEERLKK+
Sbjct: 213 VLIGEPGVGKTAVVEGLAQAIVNGDVPETLKDKQLYTLDLGSLVAGSRYRGDFEERLKKV 272
Query: 127 MEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHI 186
++EI +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEYRK+I
Sbjct: 273 LKEINTRGDIILFIDELHTLVGAGAAEGAIDAASILKPKLARGELQTIGATTLDEYRKYI 332
Query: 187 EKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISD 246
EKD ALERRFQPV+V EPSV+ TI+ILKGLR+RYE HH++ TD AL +AA L+ +YI+D
Sbjct: 333 EKDAALERRFQPVQVGEPSVEHTIEILKGLRDRYEAHHRVSITDGALAAAASLADRYIND 392
Query: 247 RFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRD 306
RFLPDKAIDLIDEAG+R+R+R P + RE + + + KEK A+ QDFEKA LRD
Sbjct: 393 RFLPDKAIDLIDEAGARMRIRRMTAPPDLREFDDRIAEARKEKESAIDAQDFEKAASLRD 452
Query: 307 REMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKVSTDE 363
+E L AQ + + + +GD+ VV EVD I ++ WTGIPV K++ +E
Sbjct: 453 KEKQLVAQ--------RAEREKQWRSGDM-DVVAEVDDEQIAEVLGNWTGIPVFKLTEEE 503
Query: 364 SDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELA 423
+ RLL+ME+ LHKR+IGQ++AVKA+S+AIRR R GLK+P RP SFIF+GP+GVGK+EL+
Sbjct: 504 TTRLLRMEDELHKRIIGQEDAVKAVSKAIRRTRAGLKDPKRPSGSFIFAGPSGVGKTELS 563
Query: 424 KALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVL 483
KALA + FG ++A+I++DM EF +R T S+L G+PPGYVGY EGGQLTE VRR+P++VVL
Sbjct: 564 KALANFLFGEDDALIQIDMGEFHDRFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVVL 623
Query: 484 FDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFD 543
FDEIEKAHP+++N +LQ+LEDGRLTD +GRTVDFKNT+LI TSN+G+S I K +GF
Sbjct: 624 FDEIEKAHPEIYNSLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGTSDISK-AVGMGFS 682
Query: 544 LDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFD 603
D+ DS Y R+K V +ELK++FRPEFLNR+D++IVF QLT ++ E+ D+M+ V
Sbjct: 683 KSNDD-DSQYERMKQKVNDELKKHFRPEFLNRIDDVIVFHQLTSEQIVEMVDLMIGRVEK 741
Query: 604 RLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSV 663
+LK KDI+L++TE+ ++ + + G++P GARPLRR I R +ED ++EK+L E++ G V
Sbjct: 742 QLKGKDIDLELTEKAKQLLAKRGFDPVLGARPLRRTIQREIEDQLSEKILFNEVEPGQIV 801
Query: 664 IVDV 667
+VDV
Sbjct: 802 VVDV 805
>gi|404372678|ref|ZP_10977973.1| hypothetical protein CSBG_00014 [Clostridium sp. 7_2_43FAA]
gi|404301168|gb|EEH96388.2| hypothetical protein CSBG_00014 [Clostridium sp. 7_2_43FAA]
Length = 812
Score = 778 bits (2009), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 369/643 (57%), Positives = 503/643 (78%), Gaps = 8/643 (1%)
Query: 21 KMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIA 80
K P L +YG NLT +A+EGKLDPVVGR+ + R+++IL RR KNNPCLIGEPGVGKTA+
Sbjct: 163 KTPLLSQYGRNLTMMAKEGKLDPVVGRENENRRILEILCRRIKNNPCLIGEPGVGKTAVI 222
Query: 81 EGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFI 140
EGLAQRI +G+VP+ ++ K +I+LD+ ++AG KYRGEFE+RLKK+M+EI+ S +II+FI
Sbjct: 223 EGLAQRIINGNVPEILKDKVIISLDLTSMLAGAKYRGEFEDRLKKVMDEIRNSKDIIIFI 282
Query: 141 DEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVK 200
DE+HT++GAG AEGAIDA+NILKP+LARGE++CIGATT+DEYRKHIE+D ALERRFQPV+
Sbjct: 283 DEIHTIVGAGGAEGAIDASNILKPALARGEIKCIGATTIDEYRKHIERDSALERRFQPVR 342
Query: 201 VPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEA 260
V EPS +ET+ ILKGLRERYE HH +R DEAL +A +LS +YI+DRF+PDKAIDLIDEA
Sbjct: 343 VEEPSKEETLDILKGLRERYEAHHMVRIEDEALEAAVELSDRYITDRFMPDKAIDLIDEA 402
Query: 261 GSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVD 320
++VR+ + P + L+ +L +KEK EA+R Q+FEKA ELRD+E LK ++++L
Sbjct: 403 SAKVRIENLTSPPDIMNLQLQLENNSKEKEEAIRNQNFEKAAELRDKERQLKNKLNSL-- 460
Query: 321 KGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIG 380
++ E + +V I +VS+W IP+EK++ ES++LL++E+ LHKRVIG
Sbjct: 461 ---KIDLTNNECNNY--IVNSEQIAKVVSSWAKIPLEKLTEQESEKLLQLEDILHKRVIG 515
Query: 381 QDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRL 440
Q EAV A+S+A+RRARVGLK+PNRPI +FIF GPTGVGK+EL+ ALA FG ++ +IR+
Sbjct: 516 QKEAVMAVSKAVRRARVGLKDPNRPIGTFIFCGPTGVGKTELSNALAEAMFGDKKNLIRI 575
Query: 441 DMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQ 500
DMSE+ME+H+V++LIG+PPGY+G+ EGGQLTEAVRR PY+V+L DEIEKAHPDVFN++LQ
Sbjct: 576 DMSEYMEKHSVARLIGAPPGYIGHDEGGQLTEAVRRNPYSVILLDEIEKAHPDVFNILLQ 635
Query: 501 ILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLV 560
I+EDGRLTDSKG+ ++FKNT++IMTSNVG+ I+K +GF DS Y ++K +
Sbjct: 636 IMEDGRLTDSKGKIINFKNTIVIMTSNVGAHDIKKQN-TLGFSASNSLVDSEYEKMKKNI 694
Query: 561 TEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRE 620
EE+KQ F+PEF+NR+D++IVF +L ++ +I ++ML D+LK + I + + E +
Sbjct: 695 MEEIKQQFKPEFINRIDDIIVFHKLEDSDILKIVNLMLNNTIDKLKDRKITINLNEESKR 754
Query: 621 RVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSV 663
+V +G + +YGARPLRR I + LED ++E+ML IK GD++
Sbjct: 755 FLVNKGVDTNYGARPLRRIITKELEDKLSEEMLKGYIKGGDNL 797
>gi|184201561|ref|YP_001855768.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Kocuria
rhizophila DC2201]
gi|183581791|dbj|BAG30262.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Kocuria
rhizophila DC2201]
Length = 872
Score = 778 bits (2008), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 388/689 (56%), Positives = 520/689 (75%), Gaps = 11/689 (1%)
Query: 2 VGESTEAVGAGVGGGSSGNKMPT--LEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 59
G EA G G GG + G + L+++G NLT A E KLDPV+GR ++ERV+Q+L
Sbjct: 150 AGGEKEAAGVGSGGRAEGTPAGSAVLDQFGRNLTAAARESKLDPVIGRYREMERVMQVLS 209
Query: 60 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 119
RRTKNNP LIGEPGVGKTA+ EGLAQ I GDVP+T++ K++ TLD+G LVAG++YRG+F
Sbjct: 210 RRTKNNPVLIGEPGVGKTAVVEGLAQAIVRGDVPETLKDKQLYTLDLGSLVAGSRYRGDF 269
Query: 120 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 179
EERLKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTL
Sbjct: 270 EERLKKVLKEIRTRGDIILFIDEIHTLVGAGAAEGAIDAASILKPMLARGELQTIGATTL 329
Query: 180 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 239
DEYRKHIEKD ALERRFQP++V EPS ++ILKGLR++YE HH++ +DEAL SA +
Sbjct: 330 DEYRKHIEKDAALERRFQPIQVDEPSEAHAVEILKGLRDKYEAHHRVSISDEALESAVSM 389
Query: 240 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 299
S +Y+SDRFLPDKAIDLIDEAG+R+R++ P E + L++++ + K A+ GQD+E
Sbjct: 390 SARYVSDRFLPDKAIDLIDEAGARLRIKRMTAPPEIKALDEKIAETKTAKEAAIDGQDYE 449
Query: 300 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 359
KA LRD E L A+ +K K + + + +V P V I ++SA TG+PV K+
Sbjct: 450 KAASLRDTEQKLIAERD---EKDKAWREGDDQISEVTPEV----ISDVLSASTGVPVYKL 502
Query: 360 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 419
S +ES RLL ME+ LHKRVIGQ+EA+KA+SR+IRR R GLK+P RP SFIF+GPTGVGK
Sbjct: 503 SEEESGRLLHMEDELHKRVIGQNEAIKALSRSIRRTRAGLKDPRRPGGSFIFAGPTGVGK 562
Query: 420 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 479
+ELAKALA + FG E+A+I LDMSE+ E+HTVS+L G+PPGYVGY EGGQLTE VRR+P+
Sbjct: 563 TELAKALAEFLFGDEDALITLDMSEYQEKHTVSRLFGAPPGYVGYEEGGQLTEKVRRKPF 622
Query: 480 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 539
+VVLFDE+EKAH D+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N+G+ I +
Sbjct: 623 SVVLFDEVEKAHQDLFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNLGTRDISR-TVP 681
Query: 540 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 599
+GF D +SY+R+++ V EELK++FRPEFLNR+DE+IVF QL++ E+ +I D+ +
Sbjct: 682 VGFQASGDAA-TSYDRMQAKVQEELKEHFRPEFLNRVDEIIVFPQLSEAEIVQIVDLFVA 740
Query: 600 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 659
+ RL+ +D+ + +T+ ++ V ++GY+P+ GARPLRR + R +ED ++E++L EI
Sbjct: 741 RLQQRLREQDMSITLTDEAKKLVAKKGYDPAMGARPLRRTMQREIEDQLSERILFGEIAS 800
Query: 660 GDSVIVDVDSDGNVTVLNGSSGAPESLAD 688
G+ + V V+ +G+ SS L+D
Sbjct: 801 GEKITVGVEGEGDDATFTFSSTPMSELSD 829
>gi|158312055|ref|YP_001504563.1| ATPase [Frankia sp. EAN1pec]
gi|158107460|gb|ABW09657.1| ATPase AAA-2 domain protein [Frankia sp. EAN1pec]
Length = 834
Score = 778 bits (2008), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 398/674 (59%), Positives = 521/674 (77%), Gaps = 18/674 (2%)
Query: 24 TLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGL 83
L+++G NLT A E KLDPV+GR+ +IERV+Q+L RRTKNNP LIGEPGVGKTA+ EGL
Sbjct: 167 VLDQFGRNLTAAARESKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGL 226
Query: 84 AQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEV 143
AQ I G+VP+T++ K++ TLD+G LVAG++YRG+FEERLKK+++EI+ +IILFIDE+
Sbjct: 227 AQAIVKGEVPETLKDKQLYTLDLGALVAGSRYRGDFEERLKKVLKEIRTRGDIILFIDEL 286
Query: 144 HTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPE 203
HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEYRKH+EKD ALERRFQP++V E
Sbjct: 287 HTLVGAGAAEGAIDAASILKPMLARGELQTIGATTLDEYRKHLEKDAALERRFQPIQVAE 346
Query: 204 PSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSR 263
PSV TI+ILKGLR+RYE HH++ TD ALV+AA L+ +YISDRFLPDKAIDLIDEAGSR
Sbjct: 347 PSVAHTIEILKGLRDRYEAHHRVSITDAALVAAASLADRYISDRFLPDKAIDLIDEAGSR 406
Query: 264 VRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGK 323
+R+R P + RE ++ + + ++K A+ QDFEKA LRD+E L A+ K
Sbjct: 407 MRIRRMTAPPDLREFDERIANVRRDKESAIDAQDFEKAASLRDKEKTLLAE--------K 458
Query: 324 EMSKAETEAGDVGPVVTEV---DIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIG 380
+ E +AGD+ VV EV +I +++ WTGIPV K++ +E+ RLL+ME+ LH+RVIG
Sbjct: 459 AKREKEWKAGDMD-VVAEVGDEEIAEVLAIWTGIPVFKLTEEETARLLRMEDELHRRVIG 517
Query: 381 QDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRL 440
Q++A+KA+S+AIRR R GLK+P RP SFIF+GP+GVGK+EL+K LA + FG E+++I+L
Sbjct: 518 QEQAIKAVSQAIRRTRAGLKDPKRPGGSFIFAGPSGVGKTELSKTLAEFLFGDEDSLIQL 577
Query: 441 DMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQ 500
DMSE+ME+HTVS+L+GSPPGYVGY EGGQLTE VRR+P++VVLFDE+EKAHPDVFN +LQ
Sbjct: 578 DMSEYMEKHTVSRLVGSPPGYVGYEEGGQLTERVRRKPFSVVLFDEVEKAHPDVFNTLLQ 637
Query: 501 ILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLV 560
ILEDGRLTDS+GR VDFKNT+LIMTSN+G+ I KG IGF D Y R+K+ V
Sbjct: 638 ILEDGRLTDSQGRLVDFKNTVLIMTSNLGTRDISKGP-GIGFATGQGAVD--YERMKAKV 694
Query: 561 TEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRE 620
+ELKQ+FRPEFLNR+D++IVF QL++ E+ +I D+ML V +LK KD+ L++T +
Sbjct: 695 QDELKQHFRPEFLNRIDDIIVFHQLSENEIIQIVDLMLARVDSQLKNKDMALELTPAAKA 754
Query: 621 RVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVT--VLNG 678
+ + GY+P GARPLRR I R +ED ++EK+L ++ G+ V+ DV+ +G V G
Sbjct: 755 LLAKRGYDPVLGARPLRRTIQREIEDILSEKILYGTLRPGEIVVGDVEGEGEEAKFVFRG 814
Query: 679 SSGAPESLADPLPV 692
P S+ D P+
Sbjct: 815 EP-KPNSVPDSPPI 827
>gi|453382789|dbj|GAC82697.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Gordonia
paraffinivorans NBRC 108238]
Length = 827
Score = 777 bits (2007), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 388/665 (58%), Positives = 514/665 (77%), Gaps = 18/665 (2%)
Query: 11 AGVGGGSSGNKMPT----LEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNP 66
AG GG SS + P+ L+++G NLT A EGKLDPV+GR+ +IERV+Q+L RRTKNNP
Sbjct: 132 AGTGGRSSESGTPSTSLVLDQFGRNLTAAAAEGKLDPVIGREKEIERVMQVLSRRTKNNP 191
Query: 67 CLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKL 126
LIGEPGVGKTA+ EGLAQ I +G VP+T++ K++ TLD+G LVAG++YRG+FEERLKK+
Sbjct: 192 VLIGEPGVGKTAVVEGLAQAIVNGKVPETLKDKQLYTLDLGSLVAGSRYRGDFEERLKKV 251
Query: 127 MEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHI 186
++EI +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEYRK+I
Sbjct: 252 LKEINTRGDIILFIDELHTLVGAGAAEGAIDAASILKPKLARGELQTIGATTLDEYRKYI 311
Query: 187 EKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISD 246
EKD ALERRFQPV+V EPSV+ TI+ILKGLR+RYE HH++ TD ALV+AA L+ +YI+D
Sbjct: 312 EKDAALERRFQPVQVGEPSVEHTIEILKGLRDRYESHHRVSITDGALVAAATLADRYIND 371
Query: 247 RFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRD 306
RFLPDKAIDLIDEAG+R+R+R P + RE ++ + + KEK A+ QDFEKA LRD
Sbjct: 372 RFLPDKAIDLIDEAGARMRIRRMTAPPDLREFDERIAEARKEKESAIDAQDFEKAAALRD 431
Query: 307 REMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKVSTDE 363
+E L A+ + + + GD+ VV EVD I ++ WTGIPV K++ +E
Sbjct: 432 KEKQLVAE--------RAEREKQWRNGDM-DVVAEVDDEQIAEVLGNWTGIPVFKLTEEE 482
Query: 364 SDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELA 423
+ RLL+MEE LHKR+IGQ++AVKA+S+AIRR R GLK+P RP SFIF+GP+GVGK+EL+
Sbjct: 483 TTRLLRMEEELHKRIIGQEDAVKAVSKAIRRTRAGLKDPKRPSGSFIFAGPSGVGKTELS 542
Query: 424 KALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVL 483
KALA + FG ++A+I++DM EF +R T S+L G+PPGYVGY EGGQLTE VRR+P++VVL
Sbjct: 543 KALANFLFGEDDALIQIDMGEFHDRFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVVL 602
Query: 484 FDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFD 543
FDEIEKAH +++N +LQ+LEDGRLTD +GRTVDFKNT+LI TSN+G+ I K +GF
Sbjct: 603 FDEIEKAHSEIYNTLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGTGDISK-AVGMGFS 661
Query: 544 LDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFD 603
D+ S Y R+K V +ELK++FRPEFLNR+D++IVF QLT+ E+ ++ D+M+ V
Sbjct: 662 -SKDDTKSGYERMKQKVNDELKKHFRPEFLNRIDDVIVFHQLTQDEIIQMVDLMIGRVET 720
Query: 604 RLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSV 663
+LK KD+ +++T++ + + + G++P GARPLRR I R +ED ++EK+L E+ G V
Sbjct: 721 QLKNKDMAIELTDKAKSLLAKRGFDPVLGARPLRRTIQREIEDQLSEKILFGELTPGQIV 780
Query: 664 IVDVD 668
+VDV+
Sbjct: 781 LVDVE 785
>gi|11467441|ref|NP_043587.1| Clp protease ATP binding subunit [Odontella sinensis]
gi|1352089|sp|P49574.1|CLPC_ODOSI RecName: Full=ATP-dependent Clp protease ATP-binding subunit clpA
homolog
gi|1185136|emb|CAA91619.1| caseinolytic-like Clp protease [Odontella sinensis]
Length = 885
Score = 777 bits (2007), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/667 (56%), Positives = 511/667 (76%), Gaps = 31/667 (4%)
Query: 19 GNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTA 78
G+ PTL+EY N++K A +GKLDPV+GR +I V+++L RR KNNP LIGEPGVGKTA
Sbjct: 167 GSSTPTLDEYSENISKEAVDGKLDPVIGRDKEIHEVIKVLARRRKNNPVLIGEPGVGKTA 226
Query: 79 IAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIIL 138
+AEGLAQ I + PD ++G ++ LD+G ++AGTKYRGEFEER+K+++EE++ IIL
Sbjct: 227 VAEGLAQLIIAEKAPDFLDGNLLMALDLGSILAGTKYRGEFEERIKRIVEEVQNDSAIIL 286
Query: 139 FIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQP 198
IDE+HTL+GAGAAEGA+DAANILKP+LARG+ +CIGATT+DEYRK+IE+DPALERRFQP
Sbjct: 287 VIDEIHTLVGAGAAEGAVDAANILKPALARGKFRCIGATTIDEYRKYIERDPALERRFQP 346
Query: 199 VKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLID 258
V V EP+V TI+IL GLR ++E HH L Y D+A+ AA L+ ++I+DRFLPDKAID++D
Sbjct: 347 VHVKEPTVGVTIEILLGLRSKFEEHHTLSYHDKAVEQAAILADKFIADRFLPDKAIDVLD 406
Query: 259 EAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQI--- 315
EAGSRVRL + +LP + L KEL+ ++K E+++ DF+ A +L D EM+++ I
Sbjct: 407 EAGSRVRLENRRLPRGMKRLLKELQDTLRDKEESIKEHDFDIAKQLVDHEMEVRTHIRIM 466
Query: 316 --SALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEET 373
S L ++ +++ E + V E D+ +++ WTGIPV K+S ES RLL MEET
Sbjct: 467 KQSILTNETLGLARKEIDT------VLEGDVAEVIAGWTGIPVNKISDSESKRLLTMEET 520
Query: 374 LHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGS 433
LH+R+IGQ A+ ++S+AIRRARVGL+NP+RPIASFIF+GPTGVGK+EL KAL+ Y FG+
Sbjct: 521 LHERLIGQHHAIVSVSKAIRRARVGLRNPDRPIASFIFAGPTGVGKTELTKALSEYMFGN 580
Query: 434 EEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPD 493
E++MIRLDMSE+ME+HTV+KLIGSPPGYVGY EGGQLTEAV+ +PY+VVL DE+EKAHPD
Sbjct: 581 EDSMIRLDMSEYMEKHTVAKLIGSPPGYVGYNEGGQLTEAVQTKPYSVVLLDEVEKAHPD 640
Query: 494 VFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGG--------RRIGFDLD 545
VFN++LQIL+DGRLTDSKGRT+DF+NT++IMT+N+G+ +IEK + F +D
Sbjct: 641 VFNLLLQILDDGRLTDSKGRTIDFRNTMIIMTTNLGAKIIEKESGIKPKTKQDKPAFRID 700
Query: 546 YDE-----------KDSS-YNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEI 593
KDS+ + ++ LV EELK++FRPEFLNR+DE+IVF LTK ++ EI
Sbjct: 701 ESGCLGWEPTPEPIKDSALFEKVTELVNEELKEFFRPEFLNRIDEIIVFNHLTKYDIWEI 760
Query: 594 ADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKML 653
+M+K++ RL+ K++ L+V R + EEGY+P YGARPLRRA+MRLLED++A++ L
Sbjct: 761 CGLMVKQLQKRLEEKELTLEVDVSVRNLLTEEGYDPVYGARPLRRAVMRLLEDTLAQQCL 820
Query: 654 AREIKEG 660
++ + G
Sbjct: 821 SKPLYPG 827
>gi|108804998|ref|YP_644935.1| ATPase [Rubrobacter xylanophilus DSM 9941]
gi|108766241|gb|ABG05123.1| ATPase AAA-2 [Rubrobacter xylanophilus DSM 9941]
Length = 834
Score = 777 bits (2007), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/660 (59%), Positives = 507/660 (76%), Gaps = 9/660 (1%)
Query: 11 AGVGGGSSGNKMPT--LEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCL 68
A GG G + T L++YG NLT LAEEGKLDPV+GR +IER++QIL RRTKNNP +
Sbjct: 154 ASARGGVEGKRPKTRQLDQYGRNLTALAEEGKLDPVIGRTQEIERIMQILVRRTKNNPVI 213
Query: 69 IGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLME 128
IGEPGVGKTAI EGLA IA+G VP+ + K+V TLD+G LVAG+KYRGEFEERLKK+M+
Sbjct: 214 IGEPGVGKTAIVEGLANEIAAGRVPEILADKEVYTLDLGALVAGSKYRGEFEERLKKIMK 273
Query: 129 EIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEK 188
EI +IILFIDE+H L+GAGAAEGAIDAA+ILKP+LARGE+Q IGATT+DEYRK++EK
Sbjct: 274 EIIDHGDIILFIDEIHNLVGAGAAEGAIDAASILKPALARGEIQVIGATTIDEYRKYVEK 333
Query: 189 DPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRF 248
D ALERRFQ ++V EP+V+ET ILKGLRERYE HHK+ TDEAL +A++L +YISDRF
Sbjct: 334 DKALERRFQTIQVGEPTVEETELILKGLRERYEEHHKIEITDEALRAASRLGDRYISDRF 393
Query: 249 LPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDRE 308
LPDKAIDL+DEA S+++++ P +E++ EL ++ + K A+ Q++E+A LRD E
Sbjct: 394 LPDKAIDLVDEAASKMKIKTMSQPPYYKEIDDELAEVRRRKEAAIDSQEYEEAARLRDSE 453
Query: 309 MDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLL 368
L + L + +E E +G E +I IVS WTGIPV K++ +ES RLL
Sbjct: 454 KKLALRKRELERQWREGKGEEQRRVSIG----ENEIAEIVSMWTGIPVRKLTEEESARLL 509
Query: 369 KMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAA 428
KMEE LH RV+GQDEA+KA+SR+IRR GLK+PNRP SF+F GPTGVGK+ELA+ LA
Sbjct: 510 KMEEALHGRVVGQDEAIKAVSRSIRRTMAGLKDPNRPSGSFVFLGPTGVGKTELARTLAE 569
Query: 429 YYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIE 488
Y FG ++AMIRLDMSE+MERHTVS+L+GSPPGYVGY EGGQLTE VRRRPY+VVLFDEIE
Sbjct: 570 YLFGDQDAMIRLDMSEYMERHTVSRLVGSPPGYVGYDEGGQLTEQVRRRPYSVVLFDEIE 629
Query: 489 KAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDE 548
KAHPDVFN++LQILEDG+LTD++GRTVDFKN +LIMTSNVG+ I K + +GF E
Sbjct: 630 KAHPDVFNILLQILEDGQLTDAQGRTVDFKNVVLIMTSNVGAQHINK-TKTLGFGA--GE 686
Query: 549 KDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTK 608
+ SY +KS VT EL++ FRPE LNR+DE+IVF +L + V++I +I +K + ++L +
Sbjct: 687 EGLSYKEMKSRVTSELRKIFRPELLNRIDEIIVFHKLEREHVRQIIEIQVKRLREQLAER 746
Query: 609 DIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVD 668
++ L+ T +++ EEGY+P++GARPL+R + R++ED M+E +L +I +G V ++ +
Sbjct: 747 NVTLEFTPEALDKLAEEGYDPAFGARPLKRVLQRMVEDPMSEMILRGDIPDGSKVTIEAN 806
>gi|302535160|ref|ZP_07287502.1| ATP-dependent chaperone ClpB [Streptomyces sp. C]
gi|302444055|gb|EFL15871.1| ATP-dependent chaperone ClpB [Streptomyces sp. C]
Length = 841
Score = 777 bits (2007), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/655 (59%), Positives = 512/655 (78%), Gaps = 16/655 (2%)
Query: 11 AGVGGGSSGNKMPTL--EEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCL 68
A GG + G +L +++G NLT+ A E KLDPV+GR+ +IERV+Q+L RRTKNNP L
Sbjct: 153 ATAGGPAEGTPSTSLVLDQFGRNLTQAARESKLDPVIGREKEIERVMQVLSRRTKNNPVL 212
Query: 69 IGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLME 128
IGEPGVGKTA+ EGLAQ I G+VP+T++ K + TLD+G LVAG++YRG+FEERLKK+++
Sbjct: 213 IGEPGVGKTAVVEGLAQAIVKGEVPETLKDKHLYTLDLGALVAGSRYRGDFEERLKKVLK 272
Query: 129 EIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEK 188
EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEYRKH+EK
Sbjct: 273 EIRTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIGATTLDEYRKHLEK 332
Query: 189 DPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRF 248
D ALERRFQP++V EPS+ TI+ILKGLR+RYE HH++ TDEALV AA L+ +YISDRF
Sbjct: 333 DAALERRFQPIQVAEPSLPHTIEILKGLRDRYEAHHRVSITDEALVQAATLADRYISDRF 392
Query: 249 LPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDRE 308
LPDKAIDLIDEAGSR+R+R P + RE ++++ + ++K A+ QDFEKA LRD E
Sbjct: 393 LPDKAIDLIDEAGSRMRIRRMTAPPDLREFDEKIAAVRRDKESAIDSQDFEKAASLRDSE 452
Query: 309 MDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKVSTDESD 365
L L K K + E +AGD+ VV EVD I +++ TGIPV K++ +ES
Sbjct: 453 KQL------LTAKSKR--EKEWKAGDM-DVVAEVDGELIAEVLATATGIPVFKLTEEESS 503
Query: 366 RLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKA 425
RLL+ME+ LHKRVIGQ +A+KA+S+AIRR R GLK+P RP SFIF+GP+GVGK+EL+K
Sbjct: 504 RLLRMEDELHKRVIGQKDAIKALSQAIRRTRAGLKDPKRPGGSFIFAGPSGVGKTELSKT 563
Query: 426 LAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFD 485
LA + FG E+A+I LDMSEF E+HTVS+L GSPPGYVGY EGGQLTE VRR+P++VVLFD
Sbjct: 564 LAEFLFGDEDALISLDMSEFSEKHTVSRLFGSPPGYVGYEEGGQLTEKVRRKPFSVVLFD 623
Query: 486 EIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLD 545
E+EKAHPD+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N+G+ I K G +GF
Sbjct: 624 EVEKAHPDIFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNLGTRDISK-GFNLGFAAQ 682
Query: 546 YDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRL 605
D K + Y+R+K+ V EELKQ+FRPEFLNR+D+ +VF QL++ ++ +I D+M+ +V +RL
Sbjct: 683 GDVK-TGYDRMKAKVNEELKQHFRPEFLNRVDDTVVFHQLSQEDIIQIVDLMIAKVDERL 741
Query: 606 KTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEG 660
K +D+ ++++ ++ + + GY+P GARPLRR I R +ED ++EK+L E++ G
Sbjct: 742 KDRDMGIELSGDAKQLLAKRGYDPIMGARPLRRTIQREIEDLLSEKILFGELRPG 796
>gi|417941914|ref|ZP_12585194.1| ATP-dependent chaperone protein ClpB [Bifidobacterium breve CECT
7263]
gi|376167760|gb|EHS86584.1| ATP-dependent chaperone protein ClpB [Bifidobacterium breve CECT
7263]
Length = 863
Score = 777 bits (2007), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 384/669 (57%), Positives = 521/669 (77%), Gaps = 8/669 (1%)
Query: 3 GESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRT 62
G+ A GV + + L+++G NLT A EGKLDPV+GR +IERV+ +L RRT
Sbjct: 152 GKGDLANAGGVADKQNKSGSAILDQFGRNLTAEAAEGKLDPVIGRTNEIERVMVVLSRRT 211
Query: 63 KNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEER 122
KNNP LIGEPGVGKTA+ EGLAQ+I +GDVP+T++GK+V +LD+G +VAG++YRG+FEER
Sbjct: 212 KNNPVLIGEPGVGKTAVVEGLAQKIQAGDVPETLKGKQVYSLDLGSMVAGSRYRGDFEER 271
Query: 123 LKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEY 182
LKK+++EIK +I+LFIDE+HT++GAG+A+GA+ A+++LKP LARGELQ IGATT DEY
Sbjct: 272 LKKVLKEIKTRGDIVLFIDEIHTIVGAGSADGALGASDMLKPMLARGELQTIGATTTDEY 331
Query: 183 RKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQ 242
RK+IEKD ALERRFQP++V EP++ ETI+ILKGLR RYE HH + TD AL SAA+LS +
Sbjct: 332 RKYIEKDAALERRFQPIQVHEPTIAETIEILKGLRSRYENHHHVTITDGALQSAAELSSR 391
Query: 243 YISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAG 302
YI DR LPDKAIDLIDEAG+R+R++ P E +EL+ ++ +I+ +K+EA++GQDFEKA
Sbjct: 392 YIQDRNLPDKAIDLIDEAGARLRIKRLTAPPELKELDDKIAKISADKDEAIKGQDFEKAA 451
Query: 303 ELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTD 362
ELRD + L+A+ K KE S E E+ DV VV E I ++SA TGIPV K++
Sbjct: 452 ELRDNQEKLEAE-----RKAKEDSWREGES-DVKMVVDEDVIAEVISATTGIPVFKLTQA 505
Query: 363 ESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSEL 422
ES +LL ME LHKR+IGQDEAV A+SR+IRR RVGLK+P RP SFIF+GPTGVGK+EL
Sbjct: 506 ESKKLLNMEAELHKRIIGQDEAVSALSRSIRRTRVGLKDPKRPSGSFIFAGPTGVGKTEL 565
Query: 423 AKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVV 482
AK LA + F E+A+IR+DMSEF E++ S+L G+PPGYVGY EGG+LTE VRR+P++VV
Sbjct: 566 AKTLAEFLFDDEDALIRVDMSEFSEKYAASRLFGAPPGYVGYEEGGELTEKVRRKPFSVV 625
Query: 483 LFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGF 542
LFDEIEKAHPD+FN +LQ+L+DG LTD +GR VDFKNT++I+T+N+G+ I K GF
Sbjct: 626 LFDEIEKAHPDIFNTLLQVLDDGHLTDGQGRKVDFKNTIIILTTNLGTRDIAKAA-NTGF 684
Query: 543 DLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVF 602
+L + +SSY R+K V+ ELKQ FRPEFLNRLD++IVF+QLT+ +V++I D+ +K++
Sbjct: 685 NLGAN-SESSYQRMKDQVSSELKQQFRPEFLNRLDDIIVFKQLTEPQVRQIVDLDVKQLN 743
Query: 603 DRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDS 662
DRL + + L++T+ ++ + ++G++P GARPLRR I R +ED+++EK+L ++++G
Sbjct: 744 DRLFDRHMSLELTDAAKDLLAQKGFDPLLGARPLRRVIQRDIEDAISEKILMGDLEDGQK 803
Query: 663 VIVDVDSDG 671
VIVD + +G
Sbjct: 804 VIVDAEGEG 812
>gi|152964564|ref|YP_001360348.1| ATPase AAA [Kineococcus radiotolerans SRS30216]
gi|151359081|gb|ABS02084.1| ATPase AAA-2 domain protein [Kineococcus radiotolerans SRS30216]
Length = 851
Score = 777 bits (2007), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/669 (58%), Positives = 520/669 (77%), Gaps = 13/669 (1%)
Query: 25 LEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLA 84
L+++G NLT+ A EGKLDPV+GR PQIERV+Q+L RRTKNNP LIGEPGVGKTA+ EGLA
Sbjct: 185 LDQFGRNLTQAAREGKLDPVIGRDPQIERVMQVLSRRTKNNPILIGEPGVGKTAVVEGLA 244
Query: 85 QRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVH 144
Q + G+VP+T++ K++ TLD+G LVAG++YRG+FEERL+K+++EI+ +IILFIDE+H
Sbjct: 245 QSVVRGEVPETLKDKQIYTLDLGALVAGSRYRGDFEERLRKVLKEIRTRGDIILFIDEIH 304
Query: 145 TLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEP 204
TL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDE+RKHIEKDPALERRFQP++VPEP
Sbjct: 305 TLVGAGAAEGAIDAASILKPMLARGELQTIGATTLDEFRKHIEKDPALERRFQPIQVPEP 364
Query: 205 SVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRV 264
++ I+ILKGLR+RYE HH++ TD ALV+AA L+ +Y++DR+LPDKAIDLIDEAG+R+
Sbjct: 365 TLAHAIEILKGLRDRYEAHHRVSITDAALVAAATLADRYVNDRYLPDKAIDLIDEAGARL 424
Query: 265 RLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKE 324
R+R P + RE ++ + + +EK A+ QDFEKA LRD E L AQ KG+
Sbjct: 425 RIRRMTAPPDLREFDERIADVRREKESAIDAQDFEKAASLRDNEKKLLAQ------KGER 478
Query: 325 MSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQ 381
+ + ++GD+ V+ EVD I +++ TGIPV +++ +ES RLL ME LHKRVIGQ
Sbjct: 479 --EKQWKSGDMD-VIAEVDEELIAEVLAVSTGIPVVRLTEEESTRLLNMEAELHKRVIGQ 535
Query: 382 DEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLD 441
++A+KA+S+AIRR R GLK+P RP SFIF+GPTGVGK+ELAKALA + FG E+A+I+LD
Sbjct: 536 NDAIKALSQAIRRTRAGLKDPKRPGGSFIFAGPTGVGKTELAKALAEFLFGEEDALIQLD 595
Query: 442 MSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQI 501
MSEF E+HTVS+L GSPPGYVGY EGGQLTE VRR+P++VVLFDE+EKAHPD+FN +LQI
Sbjct: 596 MSEFSEKHTVSRLFGSPPGYVGYEEGGQLTEKVRRKPFSVVLFDEVEKAHPDIFNSLLQI 655
Query: 502 LEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVT 561
LEDGRLTDS+GR VDFKNT++IMT+N+G+ I K G GF + ++Y R+KS V
Sbjct: 656 LEDGRLTDSQGRMVDFKNTVIIMTTNLGTRDISK-GVGTGFAAGSQTQQTNYERMKSKVN 714
Query: 562 EELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRER 621
+ELKQ+FRPEFLNR+D+++VF QLT+ E+ +I D+ +K V DRLK KD+ +++T +
Sbjct: 715 DELKQHFRPEFLNRVDDIVVFPQLTQEEIVQIVDLFIKRVDDRLKDKDMGIELTPSAKVL 774
Query: 622 VVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNGSSG 681
+ +GY+P GARPLRR I R +ED ++EK+L +++ G V VD + +G
Sbjct: 775 LATKGYDPVLGARPLRRTIQRDIEDVLSEKILFGDLRAGQIVSVDTEGEGTEQKFTFEGT 834
Query: 682 APESLADPL 690
+ E + +P+
Sbjct: 835 SKEDVPEPV 843
>gi|403718430|ref|ZP_10943315.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Kineosphaera
limosa NBRC 100340]
gi|403208500|dbj|GAB97998.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Kineosphaera
limosa NBRC 100340]
Length = 864
Score = 777 bits (2007), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 398/695 (57%), Positives = 528/695 (75%), Gaps = 20/695 (2%)
Query: 4 ESTEAVGAGVGGGSSGNKMPT----LEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 59
+ E GA VGG SS P L+++G NLT+ A E KLDPV+GR +IERV+Q+L
Sbjct: 146 QGKEPAGASVGGQSSQEATPAGSLVLDQFGRNLTQAARENKLDPVIGRTSEIERVMQVLS 205
Query: 60 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 119
RRTKNNP LIGEPGVGKTA+ EGLAQ I G+VP+T++ K + TLD+G LVAG++YRG+F
Sbjct: 206 RRTKNNPILIGEPGVGKTAVVEGLAQDIVKGEVPETLKDKHIYTLDLGALVAGSRYRGDF 265
Query: 120 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 179
EERLKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTL
Sbjct: 266 EERLKKVLKEIRTRGDIILFIDEIHTLVGAGAAEGAIDAASILKPMLARGELQTIGATTL 325
Query: 180 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 239
DEYRKHIEKDPALERRFQP++V EP++ I+ILKGLR+RYE HH++ TD ALV+AA +
Sbjct: 326 DEYRKHIEKDPALERRFQPIQVAEPTLSHAIEILKGLRDRYEAHHRVSITDAALVAAANM 385
Query: 240 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 299
+ +YI+DR+LPDKAIDLIDEAG+R+R+R P + RE ++++ + +EK A+ GQDFE
Sbjct: 386 ADRYINDRYLPDKAIDLIDEAGARLRIRRMTAPPDLREFDEKIAHVRREKEAAIDGQDFE 445
Query: 300 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPV 356
KA +LRD E L + K + E ++GD+ VV EVD I +++A TGIPV
Sbjct: 446 KAAKLRDDERRLI--------EAKNKREKEWKSGDM-DVVAEVDEELIAEVLAASTGIPV 496
Query: 357 EKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTG 416
K++ +ES RLL ME LHKR++G D+A+KA+S+AIRR R GLK+P RP SFIF+GPTG
Sbjct: 497 FKLTEEESSRLLNMEAELHKRIVGMDDAIKALSQAIRRTRAGLKDPRRPGGSFIFAGPTG 556
Query: 417 VGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRR 476
VGK+ELAK LA + FG E+++I LDMSEF E+HTVS+L GSPPGYVGY EGGQLTE VRR
Sbjct: 557 VGKTELAKTLAEFLFGDEDSLITLDMSEFAEKHTVSRLFGSPPGYVGYEEGGQLTEKVRR 616
Query: 477 RPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKG 536
+P++VVLFDE+EKAH D+FN +LQILEDGRLTD++GR VDFKNT++IMT+N+G+ I K
Sbjct: 617 KPFSVVLFDEVEKAHADIFNSLLQILEDGRLTDAQGRVVDFKNTVIIMTTNLGTRDISK- 675
Query: 537 GRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADI 596
+GF D SSY R+K+ VT+ELKQ+FRPEFLNR+D+ IVF QL + E+ +I D+
Sbjct: 676 AVSLGFSAGNDAA-SSYERMKNKVTDELKQHFRPEFLNRVDDTIVFPQLKEEEIVQIVDL 734
Query: 597 MLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLARE 656
M+ ++ +RLK KD+ ++++ + + ++GY+P GARPLRRAI R +ED ++E++L +
Sbjct: 735 MIAKLDERLKDKDMGIELSPAAKSLLAKKGYDPVLGARPLRRAIQRDIEDVLSEQILYGQ 794
Query: 657 IKEGDSVIVDVDSDGNVT--VLNGSSGAPESLADP 689
+ G+ V VDV+ +G+ +G+S PE P
Sbjct: 795 VGAGEIVGVDVEGEGDEAKFTFHGTSKEPEPATVP 829
>gi|418246284|ref|ZP_12872681.1| ATP-dependent protease [Corynebacterium glutamicum ATCC 14067]
gi|354509829|gb|EHE82761.1| ATP-dependent protease [Corynebacterium glutamicum ATCC 14067]
Length = 925
Score = 777 bits (2006), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/649 (58%), Positives = 509/649 (78%), Gaps = 16/649 (2%)
Query: 25 LEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLA 84
L+++G NLT+ A++GKLDPVVGR +IER++Q+L RRTKNNP LIGEPGVGKTA+ EGLA
Sbjct: 190 LDQFGRNLTQAAKDGKLDPVVGRDKEIERIMQVLSRRTKNNPVLIGEPGVGKTAVVEGLA 249
Query: 85 QRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVH 144
I +G VP+T++ K+V +LD+G LVAG++YRG+FEERLKK+++EI Q +IILFIDE+H
Sbjct: 250 LDIVNGKVPETLKDKQVYSLDLGSLVAGSRYRGDFEERLKKVLKEINQRGDIILFIDEIH 309
Query: 145 TLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEP 204
TL+GAGAAEGAIDAA++LKP LARGELQ IGATTLDEYRKHIEKD ALERRFQPV+VPEP
Sbjct: 310 TLVGAGAAEGAIDAASLLKPKLARGELQTIGATTLDEYRKHIEKDAALERRFQPVQVPEP 369
Query: 205 SVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRV 264
SVD T++ILKGLR+RYE HH++ TD AL +AAQL+ +YI+DRFLPDKA+DLIDEAG+R+
Sbjct: 370 SVDLTVEILKGLRDRYEAHHRVSITDGALTAAAQLADRYINDRFLPDKAVDLIDEAGARM 429
Query: 265 RLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKE 324
R++ P RE+++ + + +EK A+ QDFEKA LRD+E L G+E
Sbjct: 430 RIKRMTAPSSLREVDERIADVRREKEAAIDAQDFEKAAGLRDKERKL----------GEE 479
Query: 325 MSKAETE--AGDVGPV--VTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIG 380
S+ E + +GD+ + V E I +++ WTGIPV K++ ES RLL MEE LHKR+IG
Sbjct: 480 RSEKEKQWRSGDLEDIAEVGEEQIAEVLANWTGIPVFKLTEAESSRLLNMEEELHKRIIG 539
Query: 381 QDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRL 440
QDEAVKA+SRAIRR R GLK+P RP SFIF+GP+GVGK+EL+KALA + FG ++++I++
Sbjct: 540 QDEAVKAVSRAIRRTRAGLKDPKRPSGSFIFAGPSGVGKTELSKALAGFLFGDDDSLIQI 599
Query: 441 DMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQ 500
DM EF +R T S+L G+PPGYVGY EGGQLTE VRR+P++VVLFDEIEKAH +++N +LQ
Sbjct: 600 DMGEFHDRFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHKEIYNTLLQ 659
Query: 501 ILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYD-EKDSSYNRIKSL 559
+LEDGRLTD +GR VDFKNT+LI TSN+G+S I K +GF + + D+ Y+R+K+
Sbjct: 660 VLEDGRLTDGQGRIVDFKNTVLIFTSNLGTSDISK-AVGLGFSGSSETDSDAQYDRMKNK 718
Query: 560 VTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFR 619
V +ELK++FRPEFLNR+DE++VF QLTK ++ ++ D+++ V + L KD+ +++TE+ +
Sbjct: 719 VHDELKKHFRPEFLNRIDEIVVFHQLTKDQIVQMVDLLIGRVSNALAEKDMSIELTEKAK 778
Query: 620 ERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVD 668
+ + G++P GARPLRR I R +ED M+EK+L EI G+ V VDV+
Sbjct: 779 DLLASRGFDPVLGARPLRRTIQREIEDQMSEKILFGEIGAGEIVTVDVE 827
>gi|300742477|ref|ZP_07072498.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Rothia
dentocariosa M567]
gi|300381662|gb|EFJ78224.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Rothia
dentocariosa M567]
Length = 850
Score = 777 bits (2006), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/668 (57%), Positives = 516/668 (77%), Gaps = 17/668 (2%)
Query: 11 AGVGGGSSGNKMPT----LEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNP 66
AGVG G+S P L+++G NLT A EG+LDPV+GR ++ERV+Q+L RRTKNNP
Sbjct: 155 AGVGAGNSREGTPAGSTILDQFGRNLTAAAREGQLDPVIGRHHEMERVMQVLSRRTKNNP 214
Query: 67 CLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKL 126
LIGEPGVGKTA+ EGLAQ I GDVP+T++ K + TLD+G LVAG++YRG+FEERLKK+
Sbjct: 215 VLIGEPGVGKTAVVEGLAQAIVHGDVPETLKDKHLYTLDLGSLVAGSRYRGDFEERLKKV 274
Query: 127 MEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHI 186
++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEYRKHI
Sbjct: 275 LKEIRTRGDIILFIDEIHTLVGAGAAEGAIDAASILKPMLARGELQTIGATTLDEYRKHI 334
Query: 187 EKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISD 246
EKD ALERRFQP++V EPS D +QILKG+R++YE HH++ TDE++ +A L+ +YISD
Sbjct: 335 EKDAALERRFQPIQVDEPSQDLAVQILKGVRDKYEAHHRVTITDESIEAAVNLAARYISD 394
Query: 247 RFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRD 306
RFLPDKA+DLIDEAG+R+R++ P E + L+++ ++ +K +A++GQD+EKA LRD
Sbjct: 395 RFLPDKAVDLIDEAGARLRIKRMTAPPEIKILDEKASKLRTQKEDAIKGQDYEKAAALRD 454
Query: 307 REMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDR 366
+E + A+ + E KA E GD VT I ++++ TG+PV K++ +ES R
Sbjct: 455 QEQKVLAEKA-------EAEKAWRENGDAFGEVTPEVISEVLASSTGVPVYKITEEESSR 507
Query: 367 LLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKAL 426
L+KME+ LHKRVIGQD A+KA+SRAIRR R GLK+P RP SFIF+GPTGVGK+ELAKAL
Sbjct: 508 LIKMEDELHKRVIGQDNAIKALSRAIRRTRAGLKDPRRPGGSFIFAGPTGVGKTELAKAL 567
Query: 427 AAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDE 486
A + FG E+A+I LDMSE+ E+HTVS+L G+PPGYVGY EGGQLTE VRR+P++VVLFDE
Sbjct: 568 AEFLFGDEDALITLDMSEYQEKHTVSRLFGAPPGYVGYDEGGQLTEKVRRKPFSVVLFDE 627
Query: 487 IEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR--IGFDL 544
+EKAH D+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N+GS + RR +GF
Sbjct: 628 VEKAHTDLFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNLGSRDV---NRRVPVGFQA 684
Query: 545 DYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDR 604
D D+ Y R+++ V E LK++FRPEFLNR+D++IVF QL++ E+ +I D+ + + R
Sbjct: 685 -MDHGDADYERMQARVMENLKEHFRPEFLNRVDDIIVFPQLSENEILQIVDLFVGRLAKR 743
Query: 605 LKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVI 664
L +++ +++T+ + + +GY+P+ GARPLRR + R +ED+++EK+L EIK G+ +
Sbjct: 744 LADQEMSIELTDAAKVLMASKGYDPAMGARPLRREMQRNIEDALSEKILFGEIKPGEKIT 803
Query: 665 VDVDSDGN 672
V V+ +G+
Sbjct: 804 VGVEGEGD 811
>gi|377565955|ref|ZP_09795231.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Gordonia sputi
NBRC 100414]
gi|377526869|dbj|GAB40396.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Gordonia sputi
NBRC 100414]
Length = 847
Score = 777 bits (2006), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 388/667 (58%), Positives = 514/667 (77%), Gaps = 20/667 (2%)
Query: 11 AGVGGGSSGNKMPT----LEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNP 66
AG GG SS P+ L+++G NLT A EGKLDPV+GR+ +IERV+Q+L RRTKNNP
Sbjct: 153 AGTGGRSSEAGTPSTSLVLDQFGRNLTAAAAEGKLDPVIGREKEIERVMQVLSRRTKNNP 212
Query: 67 CLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKL 126
LIGEPGVGKTA+ EGLAQ I +G VP+T++ K++ TLD+G LVAG++YRG+FEERLKK+
Sbjct: 213 VLIGEPGVGKTAVVEGLAQAIVNGQVPETLKDKQLYTLDLGSLVAGSRYRGDFEERLKKV 272
Query: 127 MEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHI 186
++EI +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEYRK+I
Sbjct: 273 LKEINTRGDIILFIDELHTLVGAGAAEGAIDAASILKPKLARGELQTIGATTLDEYRKYI 332
Query: 187 EKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISD 246
EKD ALERRFQPV+V EPSV+ TI+ILKGLR+RYE HH++ TD ALV+AA L+ +YI+D
Sbjct: 333 EKDAALERRFQPVQVGEPSVEHTIEILKGLRDRYETHHRVSITDGALVAAATLADRYIND 392
Query: 247 RFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRD 306
RFLPDKAIDLIDEAG+R+R+R P + RE ++ + KEK A+ QDFEKA LRD
Sbjct: 393 RFLPDKAIDLIDEAGARMRIRRMTAPPDLREFDERIADARKEKESAIDAQDFEKAASLRD 452
Query: 307 REMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKVSTDE 363
+E LV++ E K + +GD+ VV EV+ I ++ WTGIPV K++ +E
Sbjct: 453 KE-------KQLVNERAEREK-QWRSGDM-DVVAEVNDEQIAEVLGNWTGIPVFKLTEEE 503
Query: 364 SDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELA 423
+ RLL+MEE LHKR+IGQ++AVKA+S+AIRR R GLK+P RP SFIF+GP+GVGK+EL+
Sbjct: 504 TTRLLRMEEELHKRIIGQEDAVKAVSKAIRRTRAGLKDPKRPSGSFIFAGPSGVGKTELS 563
Query: 424 KALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVL 483
KALA + FG ++A+I++DM EF +R T S+L G+PPGYVGY EGGQLTE VRR+P++VVL
Sbjct: 564 KALANFLFGEDDALIQIDMGEFHDRFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVVL 623
Query: 484 FDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFD 543
FDEIEKAH +++N +LQ+LEDGRLTD +GRTVDFKNT+LI TSN+G+S I K +G
Sbjct: 624 FDEIEKAHSEIYNTLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGTSDISKA---VGLG 680
Query: 544 LDYDEKD-SSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVF 602
D S Y R+K V +ELK++FRPEFLNR+D+++VF QLT+ E+ ++ D+ML V
Sbjct: 681 FSKTGSDGSQYERMKQKVNDELKKHFRPEFLNRIDDIVVFHQLTQDEIIQMVDLMLARVE 740
Query: 603 DRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDS 662
L+ KD+ ++VT++ + + + G++P GARPLRR I R +ED ++EK+L E++ G
Sbjct: 741 TALRNKDMAIEVTDKAKSLLAKRGFDPVLGARPLRRTIQREIEDQLSEKILFGEVEPGQI 800
Query: 663 VIVDVDS 669
V++DV++
Sbjct: 801 VLIDVEN 807
>gi|357019920|ref|ZP_09082155.1| negative regulator of genetic competence ClpC/mecB [Mycobacterium
thermoresistibile ATCC 19527]
gi|356479956|gb|EHI13089.1| negative regulator of genetic competence ClpC/mecB [Mycobacterium
thermoresistibile ATCC 19527]
Length = 831
Score = 777 bits (2006), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/648 (57%), Positives = 512/648 (79%), Gaps = 15/648 (2%)
Query: 25 LEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLA 84
L+++G NLT+ A EGKLDPV+GR+ ++ER++Q+L RRTKNNP LIGEPGVGKTA+ EGLA
Sbjct: 150 LDQFGRNLTQAAAEGKLDPVIGREKEVERIMQVLSRRTKNNPVLIGEPGVGKTAVVEGLA 209
Query: 85 QRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVH 144
Q I +G+VP+T++ K++ TLD+G LVAG++YRG+FEERLKK+++EI +IILFIDE+H
Sbjct: 210 QAIVAGEVPETLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDELH 269
Query: 145 TLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEP 204
TL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEYRK+IEKD ALERRFQPV+V EP
Sbjct: 270 TLVGAGAAEGAIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEP 329
Query: 205 SVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRV 264
+V+ TI+ILKGLR+RYE HH++ TD A+V+AA L+ +YI+DR+LPDKAIDLIDEAG+R+
Sbjct: 330 TVEHTIEILKGLRDRYEAHHRVSITDSAMVAAATLADRYINDRYLPDKAIDLIDEAGARM 389
Query: 265 RLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKE 324
R+R P + RE ++++ + +EK A+ QDFEKA LRD+E L AQ +
Sbjct: 390 RIRRMTAPPDLREFDEKIAETRREKESAIDAQDFEKAAALRDQEKQLVAQ--------RA 441
Query: 325 MSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQ 381
+ + AGD+ VV EVD I ++ WTGIPV K++ E+ RLL+MEE LHKR+IGQ
Sbjct: 442 EREKQWRAGDL-DVVAEVDDEQIAEVLGNWTGIPVFKLTEAETTRLLRMEEELHKRIIGQ 500
Query: 382 DEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLD 441
++AV+A+S+AIRR R GLK+P RP SFIF+GP+GVGK+EL+KALA + FG E+A+I++D
Sbjct: 501 EDAVRAVSKAIRRTRAGLKDPKRPSGSFIFAGPSGVGKTELSKALAEFLFGDEDALIQID 560
Query: 442 MSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQI 501
M E+ +R T S+L G+PPGYVGY EGGQLTE VRR+P++VVLFDEIEKAH +++N +LQ+
Sbjct: 561 MGEYHDRFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNTLLQV 620
Query: 502 LEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVT 561
LEDGRLTD +GRTVDFKNT+LI TSN+G+S I K +G +++Y R+K V
Sbjct: 621 LEDGRLTDGQGRTVDFKNTVLIFTSNLGTSDISKA---VGLGFSQGGSENNYERMKQKVH 677
Query: 562 EELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRER 621
+ELK++FRPEFLNR+D++IVF QLT+ ++ ++ D+M+ V ++LK KD++LQ+T++ ++
Sbjct: 678 DELKKHFRPEFLNRIDDIIVFHQLTQEQIIQMVDLMIDRVRNQLKAKDMDLQLTDKAKQL 737
Query: 622 VVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDS 669
+ + G++P GARPLRR I R +ED ++EK+L E++ G + VDV++
Sbjct: 738 LAKRGFDPVLGARPLRRTIQREIEDQLSEKILFEELRPGQLITVDVEN 785
>gi|19553872|ref|NP_601874.1| ATPase with chaperone activity, ATP-binding subunit
[Corynebacterium glutamicum ATCC 13032]
gi|62391515|ref|YP_226917.1| ATP-dependent protease [Corynebacterium glutamicum ATCC 13032]
gi|21325450|dbj|BAC00072.1| ATPases with chaperone activity, ATP-binding subunit
[Corynebacterium glutamicum ATCC 13032]
gi|41326857|emb|CAF20701.1| PROBABLE ATP-DEPENDENT PROTEASE (HEAT SHOCK PROTEIN)
[Corynebacterium glutamicum ATCC 13032]
gi|385144766|emb|CCH25805.1| ATPase with chaperone activity, ATP-binding subunit
[Corynebacterium glutamicum K051]
Length = 925
Score = 777 bits (2006), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 383/660 (58%), Positives = 514/660 (77%), Gaps = 18/660 (2%)
Query: 16 GSSGNKMPTL--EEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPG 73
GS G + +L +++G NLT+ A++GKLDPVVGR +IER++Q+L RRTKNNP LIGEPG
Sbjct: 179 GSPGERSTSLVLDQFGRNLTQAAKDGKLDPVVGRDKEIERIMQVLSRRTKNNPVLIGEPG 238
Query: 74 VGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQS 133
VGKTA+ EGLA I +G VP+T++ K+V +LD+G LVAG++YRG+FEERLKK+++EI Q
Sbjct: 239 VGKTAVVEGLALDIVNGKVPETLKDKQVYSLDLGSLVAGSRYRGDFEERLKKVLKEINQR 298
Query: 134 DEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALE 193
+IILFIDE+HTL+GAGAAEGAIDAA++LKP LARGELQ IGATTLDEYRKHIEKD ALE
Sbjct: 299 GDIILFIDEIHTLVGAGAAEGAIDAASLLKPKLARGELQTIGATTLDEYRKHIEKDAALE 358
Query: 194 RRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKA 253
RRFQPV+VPEPSVD T++ILKGLR+RYE HH++ TD AL +AAQL+ +YI+DRFLPDKA
Sbjct: 359 RRFQPVQVPEPSVDLTVEILKGLRDRYEAHHRVSITDGALTAAAQLADRYINDRFLPDKA 418
Query: 254 IDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKA 313
+DLIDEAG+R+R++ P RE+++ + + +EK A+ QDFEKA LRD+E L
Sbjct: 419 VDLIDEAGARMRIKRMTAPSSLREVDERIADVRREKEAAIDAQDFEKAAGLRDKERKL-- 476
Query: 314 QISALVDKGKEMSKAETE--AGDVGPV--VTEVDIQHIVSAWTGIPVEKVSTDESDRLLK 369
G+E S+ E + +GD+ + V E I +++ WTGIPV K++ ES RLL
Sbjct: 477 --------GEERSEKEKQWRSGDLEDIAEVGEEQIAEVLANWTGIPVFKLTEAESSRLLN 528
Query: 370 MEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAY 429
MEE LHKR+IGQDEAVKA+SRAIRR R GLK+P RP SFIF+GP+GVGK+EL+KALA +
Sbjct: 529 MEEELHKRIIGQDEAVKAVSRAIRRTRAGLKDPKRPSGSFIFAGPSGVGKTELSKALAGF 588
Query: 430 YFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEK 489
FG ++++I++DM EF +R T S+L G+PPGYVGY EGGQLTE VRR+P++VVLFDEIEK
Sbjct: 589 LFGDDDSLIQIDMGEFHDRFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEK 648
Query: 490 AHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYD-E 548
AH +++N +LQ+LEDGRLTD +GR VDFKNT+LI TSN+G++ I K +GF + +
Sbjct: 649 AHKEIYNTLLQVLEDGRLTDGQGRIVDFKNTVLIFTSNLGTADISK-AVGLGFSGSSETD 707
Query: 549 KDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTK 608
D+ Y+R+K+ V +ELK++FRPEFLNR+DE++VF QLTK ++ ++ D+++ V + L K
Sbjct: 708 SDAQYDRMKNKVHDELKKHFRPEFLNRIDEIVVFHQLTKDQIVQMVDLLIGRVSNALAEK 767
Query: 609 DIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVD 668
D+ +++TE+ ++ + G++P GARPLRR I R +ED M+EK+L EI G+ V VDV+
Sbjct: 768 DMSIELTEKAKDLLANRGFDPVLGARPLRRTIQREIEDQMSEKILFGEIGAGEIVTVDVE 827
>gi|383820312|ref|ZP_09975569.1| chaperone ATPase [Mycobacterium phlei RIVM601174]
gi|383335314|gb|EID13745.1| chaperone ATPase [Mycobacterium phlei RIVM601174]
Length = 843
Score = 777 bits (2006), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/648 (58%), Positives = 506/648 (78%), Gaps = 15/648 (2%)
Query: 25 LEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLA 84
L+++G NLT A EGKLDPV+GR+ +IERV+Q+L RRTKNNP LIGEPGVGKTA+ EGLA
Sbjct: 171 LDQFGRNLTAAAMEGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLA 230
Query: 85 QRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVH 144
Q I GDVP+T++ K++ TLD+G LVAG++YRG+FEERLKK+++EI +IILFIDE+H
Sbjct: 231 QAIVHGDVPETLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDELH 290
Query: 145 TLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEP 204
TL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEYRK+IEKD ALERRFQPV+V EP
Sbjct: 291 TLVGAGAAEGAIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEP 350
Query: 205 SVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRV 264
+V+ TI+ILKGLR+RYE HH++ TD ALV+AA L+ +YI+DRFLPDKAIDLIDEAG+R+
Sbjct: 351 TVEHTIEILKGLRDRYEAHHRVSITDSALVAAATLADRYINDRFLPDKAIDLIDEAGARM 410
Query: 265 RLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKE 324
R+R P + RE ++++ +EK A+ QDFEKA LRD+E L AQ +
Sbjct: 411 RIRRMTAPPDLREFDEKIADARREKESAIDAQDFEKAAALRDKEKQLVAQ--------RA 462
Query: 325 MSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQ 381
+ + +GD+ VV EVD I ++ WTGIPV K++ E+ RLL+MEE LHKR+IGQ
Sbjct: 463 EREKQWRSGDL-DVVAEVDDEQIAEVLGNWTGIPVFKLTEAETTRLLRMEEELHKRIIGQ 521
Query: 382 DEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLD 441
++AV+A+S+AIRR R GLK+P RP SFIF+GP+GVGK+EL+KALA + FG ++A+I++D
Sbjct: 522 EDAVRAVSKAIRRTRAGLKDPKRPSGSFIFAGPSGVGKTELSKALANFLFGDDDALIQID 581
Query: 442 MSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQI 501
M EF +R T S+L G+PPGYVGY EGGQLTE VRR+P++VVLFDEIEKAH +++N +LQ+
Sbjct: 582 MGEFHDRFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNSLLQV 641
Query: 502 LEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVT 561
LEDGRLTD +GRTVDFKNT+LI TSN+G+S I K +G +++Y R+K V
Sbjct: 642 LEDGRLTDGQGRTVDFKNTVLIFTSNLGTSDISKA---VGLGFSQGGGENNYERMKQKVH 698
Query: 562 EELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRER 621
+ELK++FRPEFLNR+D++IVF QLT+ E+ ++ D+M+ V +LK KD++L++T++ +
Sbjct: 699 DELKKHFRPEFLNRIDDIIVFHQLTQDEIIQMVDLMVNRVATQLKAKDMDLKLTDKAKAL 758
Query: 622 VVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDS 669
+ + G++P GARPLRR I R +ED ++EK+L EI G V VDV++
Sbjct: 759 LAKRGFDPVLGARPLRRTIQREIEDQLSEKILFEEIGPGQLVTVDVEN 806
>gi|427414117|ref|ZP_18904307.1| hypothetical protein HMPREF9282_01714 [Veillonella ratti
ACS-216-V-Col6b]
gi|425714493|gb|EKU77496.1| hypothetical protein HMPREF9282_01714 [Veillonella ratti
ACS-216-V-Col6b]
Length = 816
Score = 777 bits (2006), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/678 (56%), Positives = 521/678 (76%), Gaps = 16/678 (2%)
Query: 6 TEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNN 65
E G G G + + + L+++ T+L ++A++GK+DPV+GR +I RV+QIL RRTKNN
Sbjct: 147 AEGAGNGSGSANGSSNLGDLKDFATDLNEVAKQGKIDPVIGRDNEINRVIQILSRRTKNN 206
Query: 66 PCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKK 125
P LIGEPGVGKTAIAEGLAQRI S +VP+ + K++I+L + +VAG KYRGEFEERLKK
Sbjct: 207 PVLIGEPGVGKTAIAEGLAQRIVSQNVPEILRNKRIISLSLTAMVAGAKYRGEFEERLKK 266
Query: 126 LMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKH 185
++E+++ D++I+FIDE+HTLIGAGA+EG++DAANILKP+LARG Q IGATTLDEY+KH
Sbjct: 267 AIDEVQKHDDMIIFIDELHTLIGAGASEGSMDAANILKPALARGTFQVIGATTLDEYKKH 326
Query: 186 IEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYIS 245
IEKD ALERRFQPV V EPS +E ++ILKGLR+RYE HK + TDEAL +A +LS +YIS
Sbjct: 327 IEKDAALERRFQPVLVGEPSEEEALEILKGLRDRYEAFHKAKITDEALKAAVELSSRYIS 386
Query: 246 DRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELR 305
DRFLPDKAID++DEA S+VR++ P + ++LE L + KEK AV GQ++E+A +LR
Sbjct: 387 DRFLPDKAIDVMDEAASKVRMKVFTAPPDVKDLETRLADVRKEKEAAVTGQNYEEAAKLR 446
Query: 306 DREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESD 365
D E L +I A K SK + E VVTE DI +VS W+G+PV K++ +ES+
Sbjct: 447 DEEKKLVDEIEA---KQAARSKEDEEK----LVVTEDDIAAVVSQWSGVPVAKIAEEESE 499
Query: 366 RLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKA 425
RLL++E+ LH+RV+GQDEAV A+S+A+RRAR GLK+P RPI SF+F GPTGVGK+ELA+A
Sbjct: 500 RLLRLEDELHERVVGQDEAVVAVSKAVRRARAGLKDPKRPIGSFLFLGPTGVGKTELARA 559
Query: 426 LAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFD 485
LAA FG E AMIRLDMSE+ME+HTVS+L+G+PPGYVGY EGGQLT+AVRR+PY+V+LFD
Sbjct: 560 LAANLFGDENAMIRLDMSEYMEKHTVSRLVGAPPGYVGYDEGGQLTDAVRRKPYSVILFD 619
Query: 486 EIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLD 545
E+EKAHPD FN++LQ+L+DGRLTD++GRTVDF+NT++IMTSN+GS+ +++ +GF L
Sbjct: 620 EVEKAHPDFFNILLQVLDDGRLTDNQGRTVDFRNTVIIMTSNLGSNFLKEDSAAMGF-LA 678
Query: 546 YDEKD-------SSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIML 598
KD S++ K + +K++FRPEFLNR+DEM+VF LT ++ +I +I+L
Sbjct: 679 AKSKDDAKKNAESNFAEAKKNTLDAVKRHFRPEFLNRIDEMVVFHPLTGEDLGKIVNILL 738
Query: 599 KEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIK 658
K+V RL +D+ L+V+ E +V+EG + +YGARPL+RAI RL+ED +++ +L +
Sbjct: 739 KDVTKRLAERDLALEVSPEALEVLVKEGSDFAYGARPLKRAIQRLVEDPISDLILKGDAP 798
Query: 659 EGDSVIVDVDSDGNVTVL 676
G + +V DG++T++
Sbjct: 799 AGSVIKANV-VDGDITMV 815
>gi|291457456|ref|ZP_06596846.1| negative regulator of genetic competence ClpC/MecB [Bifidobacterium
breve DSM 20213 = JCM 1192]
gi|57339190|gb|AAW49584.1| ClpC [Bifidobacterium breve UCC2003]
gi|291381291|gb|EFE88809.1| negative regulator of genetic competence ClpC/MecB [Bifidobacterium
breve DSM 20213 = JCM 1192]
gi|339479561|gb|ABE96029.1| Negative regulator of genetic competence clpC/mecB [Bifidobacterium
breve UCC2003]
Length = 869
Score = 776 bits (2005), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/669 (57%), Positives = 520/669 (77%), Gaps = 8/669 (1%)
Query: 3 GESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRT 62
G+ A GV + + L+++G NLT A EGKLDPV+GR +IERV+ +L RRT
Sbjct: 152 GKGDLANAGGVADKQNKSGSAILDQFGRNLTAEAAEGKLDPVIGRTNEIERVMVVLSRRT 211
Query: 63 KNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEER 122
KNNP LIGEPGVGKTA+ EGLAQ+I +GDVP+T++GK+V +LD+G +VAG++YRG+FEER
Sbjct: 212 KNNPVLIGEPGVGKTAVVEGLAQKIQAGDVPETLKGKQVYSLDLGSMVAGSRYRGDFEER 271
Query: 123 LKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEY 182
LKK+++EIK +I+LFIDE+HT++GAG+A+GA+ A+++LKP LARGELQ IGATT DEY
Sbjct: 272 LKKVLKEIKTRGDIVLFIDEIHTIVGAGSADGALGASDMLKPMLARGELQTIGATTTDEY 331
Query: 183 RKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQ 242
RK+IEKD ALERRFQP++V EP++ ETI+ILKGLR RYE HH + TD AL SAA+LS +
Sbjct: 332 RKYIEKDAALERRFQPIQVHEPTIAETIEILKGLRSRYENHHHVTITDGALQSAAELSSR 391
Query: 243 YISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAG 302
YI DR LPDKAIDLIDEAG+R+R++ P E +EL+ ++ +I +K+EA++GQDFEKA
Sbjct: 392 YIQDRNLPDKAIDLIDEAGARLRIKRLTAPPELKELDDKIAKIAADKDEAIKGQDFEKAA 451
Query: 303 ELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTD 362
ELRD + L+A+ K KE S E E+ DV VV E I ++SA TGIPV K++
Sbjct: 452 ELRDNQEKLEAE-----RKAKEDSWREGES-DVKMVVDEDVIAEVISATTGIPVFKLTQA 505
Query: 363 ESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSEL 422
ES +LL ME LHKR+IGQDEAV A+SR+IRR RVGLK+P RP SFIF+GPTGVGK+EL
Sbjct: 506 ESKKLLNMEAELHKRIIGQDEAVSALSRSIRRTRVGLKDPKRPSGSFIFAGPTGVGKTEL 565
Query: 423 AKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVV 482
AK LA + F E+A+IR+DMSEF E++ S+L G+PPGYVGY EGG+LTE VRR+P++VV
Sbjct: 566 AKTLAEFLFDDEDALIRVDMSEFSEKYAASRLFGAPPGYVGYEEGGELTEKVRRKPFSVV 625
Query: 483 LFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGF 542
LFDEIEKAHPD+FN +LQ+L+DG LTD +GR VDFKNT++I+T+N+G+ I K GF
Sbjct: 626 LFDEIEKAHPDIFNTLLQVLDDGHLTDGQGRKVDFKNTIIILTTNLGTRDIAKAA-NTGF 684
Query: 543 DLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVF 602
+L + +SSY R+K V+ ELKQ FRPEFLNRLD++IVF+QLT+ EV++I D+ +K++
Sbjct: 685 NLGAN-TESSYQRMKDQVSSELKQQFRPEFLNRLDDIIVFKQLTEPEVRQIVDLDVKQLN 743
Query: 603 DRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDS 662
DRL + + L++T+ ++ + ++G++P GARPLRR I R +ED+++EK+L ++++G
Sbjct: 744 DRLFDRHMSLELTDAAKDLLAQKGFDPLLGARPLRRVIQRDIEDAISEKILMGDLEDGQR 803
Query: 663 VIVDVDSDG 671
VIVD + +G
Sbjct: 804 VIVDAEGEG 812
>gi|302530766|ref|ZP_07283108.1| ATP-dependent chaperone ClpB [Streptomyces sp. AA4]
gi|302439661|gb|EFL11477.1| ATP-dependent chaperone ClpB [Streptomyces sp. AA4]
Length = 849
Score = 776 bits (2005), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/690 (56%), Positives = 529/690 (76%), Gaps = 24/690 (3%)
Query: 2 VGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRR 61
GE + G+G G G+ + + L+++G N+T LA EGKLDPV+GR +IERV+Q+L RR
Sbjct: 147 TGEKSTESGSGRGEGTPSSSL-VLDQFGRNMTVLAREGKLDPVIGRGKEIERVMQVLSRR 205
Query: 62 TKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEE 121
TKNNP LIGEPGVGKTA+ EGLAQ I G+VP+T++ K++ TLD+G LVAG++YRG+FEE
Sbjct: 206 TKNNPVLIGEPGVGKTAVVEGLAQSIVKGEVPETLKDKQLYTLDLGSLVAGSRYRGDFEE 265
Query: 122 RLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDE 181
RLKK+++EIK +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTL+E
Sbjct: 266 RLKKVLKEIKTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIGATTLEE 325
Query: 182 YRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSY 241
YRK+IEKD ALERRFQP++V EPS++ TI+ILKGLR+RYE HH++ TD ALV+AA L+
Sbjct: 326 YRKYIEKDAALERRFQPIQVGEPSLEHTIEILKGLRDRYEAHHRVSITDSALVAAATLAD 385
Query: 242 QYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKA 301
+YI+DRFLPDKAIDLIDEAG+R+R+R P + RE ++++ + ++K A+ QDFE+A
Sbjct: 386 RYINDRFLPDKAIDLIDEAGARMRIRRMTAPPDLREFDEKIADVRRDKESAIDAQDFERA 445
Query: 302 GELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEK 358
LRD E L Q KG+ + + + GD+ VV EVD I +++ WTGIPV K
Sbjct: 446 ARLRDEEKQLLGQ------KGER--EKQWKDGDL-DVVAEVDDEQIAEVLANWTGIPVFK 496
Query: 359 VSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVG 418
++ +E+ RLL+ME+ LHKR+IGQ++AVKA+S+AIRR R GLK+P RP SFIF+GP+GVG
Sbjct: 497 LTEEETTRLLRMEDELHKRIIGQEDAVKAVSQAIRRTRAGLKDPKRPSGSFIFAGPSGVG 556
Query: 419 KSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRP 478
K+EL+KALA++ FG ++A+I++DM EF +R+T S+L G+PPGYVGY EGGQLTE VRR+P
Sbjct: 557 KTELSKALASFLFGEDDALIQIDMGEFHDRYTASRLFGAPPGYVGYEEGGQLTEKVRRKP 616
Query: 479 YTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR 538
++VVLFDEIEKAH +++N +LQ+LEDGRLTD +GRTVDFKNT+LI TSN+G+S I K
Sbjct: 617 FSVVLFDEIEKAHQEIYNTLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGTSDISK-SV 675
Query: 539 RIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIML 598
+GF D + Y ++K V EE+K++FRPEFLNR+D++IVF QL + ++ ++ D+M+
Sbjct: 676 SLGFSSGADSTN-RYEKMKQKVNEEMKKHFRPEFLNRIDDIIVFHQLNQEQIIQMVDLMI 734
Query: 599 KEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIK 658
V +LK KD+E+++TE+ + + + G++P GARPLRR I R +ED ++EK+L E++
Sbjct: 735 GRVETQLKAKDMEIELTEKAKALLAKRGFDPVLGARPLRRTIQREIEDQLSEKILFGEVE 794
Query: 659 EGDSVIVDVDSDGNVTVLNGSSGAPESLAD 688
G ++VDV+ G SG PE D
Sbjct: 795 PGQIIVVDVE---------GWSGNPEDRDD 815
>gi|269926455|ref|YP_003323078.1| ATPase AAA-2 domain protein [Thermobaculum terrenum ATCC BAA-798]
gi|269790115|gb|ACZ42256.1| ATPase AAA-2 domain protein [Thermobaculum terrenum ATCC BAA-798]
Length = 820
Score = 776 bits (2005), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/658 (58%), Positives = 505/658 (76%), Gaps = 11/658 (1%)
Query: 16 GSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVG 75
G + K P ++ GT+LT+LA KLDP+VGR+ +IERV+QIL RRTKNNP LIGEPGVG
Sbjct: 158 GKAATKTPYIDALGTDLTELARNDKLDPIVGREKEIERVMQILSRRTKNNPALIGEPGVG 217
Query: 76 KTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDE 135
KTAI EGLAQRI + DVPDT+ K+V++LDMG LVAGTKYRGEFEERLKK+M EIK+S
Sbjct: 218 KTAIVEGLAQRIVNCDVPDTLLNKRVLSLDMGALVAGTKYRGEFEERLKKIMAEIKESGA 277
Query: 136 IILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERR 195
I LFIDE+HTL+GAGAAEGA+DAANILKP+L+RGE+Q IGATTLDEYRK+IE+D ALERR
Sbjct: 278 I-LFIDELHTLVGAGAAEGAVDAANILKPALSRGEIQVIGATTLDEYRKYIERDAALERR 336
Query: 196 FQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAID 255
FQPV V EP+V+ETI+ILKG+R RYE HHKL+ TDEAL +AA L+ +Y+SDRFLPDKAID
Sbjct: 337 FQPVMVEEPTVEETIEILKGVRPRYEAHHKLKITDEALKAAAYLAARYVSDRFLPDKAID 396
Query: 256 LIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQI 315
L+DEA SRVR+ A P ++ + L+ I EK A+ Q++E A RDRE L+ +I
Sbjct: 397 LVDEAASRVRMHRAASPPSLKDALRHLKAIQDEKEAAINAQNYEMAAAFRDREERLQERI 456
Query: 316 SALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLH 375
L + +E +AE P VTE DI +VS WTGIP+ +++ +ES+RLLKMEE LH
Sbjct: 457 GMLEQQWQEEQQAEE------PYVTEEDISQVVSMWTGIPLTRIAGEESERLLKMEEELH 510
Query: 376 KRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEE 435
KR++GQDEA+ ++RA+RRAR G+K+P RP+ SFIF GPTGVGK+ELAK LA + FGSE+
Sbjct: 511 KRIVGQDEAITTVARAVRRARTGMKDPRRPVGSFIFLGPTGVGKTELAKTLAEFMFGSED 570
Query: 436 AMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVF 495
A+I++DMSEFMERH V++L+G+PPGYVGY EGGQLTEAVRR+ ++V+L DEIEKAHP+ F
Sbjct: 571 ALIKIDMSEFMERHAVARLVGAPPGYVGYEEGGQLTEAVRRKSFSVILLDEIEKAHPEAF 630
Query: 496 NMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDE---KDSS 552
NM+LQILEDG LTD+KGR V+F+NT++IMTSN+G+ +I + +GF + DE + +
Sbjct: 631 NMLLQILEDGHLTDAKGRRVNFRNTIIIMTSNIGAEMINRDT-TVGFTIRTDEAKAQQRA 689
Query: 553 YNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIEL 612
Y ++ V ELK++FRPEFLNR+D ++VF L+ +++I DI + V +RL + I+L
Sbjct: 690 YENMRDKVLSELKKHFRPEFLNRIDAVVVFHSLSPEHIRKIVDIQIDRVRERLAEQQIQL 749
Query: 613 QVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSD 670
++TE + GY+ +YGARPLRR I +ED +AE +L + + G +V+VD D
Sbjct: 750 KLTEEALNTLARRGYDQTYGARPLRRLIQTEVEDKLAEGVLEGKFQPGSTVVVDAHDD 807
>gi|297570833|ref|YP_003696607.1| ATPase AAA [Arcanobacterium haemolyticum DSM 20595]
gi|296931180|gb|ADH91988.1| ATPase AAA-2 domain protein [Arcanobacterium haemolyticum DSM
20595]
Length = 873
Score = 776 bits (2005), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/660 (59%), Positives = 508/660 (76%), Gaps = 15/660 (2%)
Query: 12 GVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGE 71
GV GS+ L+++G NLT+ A E KLDPV+GR + +RV+Q+L RR KNNP LIGE
Sbjct: 161 GVKAGST-----ILDQFGRNLTQSARENKLDPVIGRHMETQRVMQVLSRRNKNNPVLIGE 215
Query: 72 PGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIK 131
PGVGKTA+ EGLAQ IA GDVP+T++ K++ +LDMG LVAG++YRG+FEER+KK+++EI
Sbjct: 216 PGVGKTAVVEGLAQAIAHGDVPETLKDKQLYSLDMGSLVAGSRYRGDFEERMKKILKEIN 275
Query: 132 QSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPA 191
+I+LFIDE+HTL+GAGAAEGA+DAA++LKP +ARGELQ IGATTLDEYRKHIEKD A
Sbjct: 276 TRGDIVLFIDEIHTLVGAGAAEGALDAASLLKPMMARGELQVIGATTLDEYRKHIEKDAA 335
Query: 192 LERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPD 251
LERRFQP++V +PSV ETI IL+GLR+RYE H++ TDEAL +AA ++ +YI+DRFLPD
Sbjct: 336 LERRFQPIQVEQPSVKETIAILEGLRDRYEAFHRVTITDEALEAAATMADRYINDRFLPD 395
Query: 252 KAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDL 311
KAIDLIDEAG+R+ +R P E REL++E+ + ++K A+ GQDFEKA LRD+E
Sbjct: 396 KAIDLIDEAGARLAIRKMTAPPELRELDEEIADVKRQKEAAIDGQDFEKAAALRDQE--- 452
Query: 312 KAQISALVDKGKEMSKAETEAG-DVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKM 370
L +K E KA E DV VV E I ++S TGIPV K++ ES +LL+M
Sbjct: 453 ----QQLTEKRAERDKAWREGDLDVVAVVDEDLISEVLSMATGIPVFKLTEAESAKLLRM 508
Query: 371 EETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYY 430
EE LHKRVIGQ EAV A+S+AIRR R GLK+PNRP SFIF+GPTGVGK+ELAKALA +
Sbjct: 509 EEELHKRVIGQSEAVTALSQAIRRTRAGLKDPNRPGGSFIFAGPTGVGKTELAKALAEFL 568
Query: 431 FGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKA 490
FG E+A+I LDMSEF E+HTVS+L G+PPGYVGY EGGQLTE VRR+P++VVLFDE+EKA
Sbjct: 569 FGDEDALITLDMSEFQEKHTVSRLFGAPPGYVGYDEGGQLTEKVRRKPFSVVLFDEVEKA 628
Query: 491 HPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKD 550
H D+FN +LQILE+GRLTDS+GR VDFKNT++IMT+N+G+ I K G GF D D+
Sbjct: 629 HQDLFNSLLQILEEGRLTDSQGRVVDFKNTVIIMTTNLGTKDIAK-GVATGFQFDGDQT- 686
Query: 551 SSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDI 610
SSY R+K V +ELK +FRPEFLNR+D++IVF QL K E+ +I D+M+ ++ RL + +
Sbjct: 687 SSYERMKLRVNDELKNHFRPEFLNRVDDIIVFPQLQKPEILQIVDLMIAKLGARLADQGM 746
Query: 611 ELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSD 670
+ +T++ + + + GY+P GARPLRRAI R +ED ++EK+L E + G +++VDV+ D
Sbjct: 747 GIVLTDKAKNLLADRGYDPVLGARPLRRAIQRDIEDELSEKLLFGEFRSGQTIVVDVNED 806
>gi|452958959|gb|EME64301.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Amycolatopsis
decaplanina DSM 44594]
Length = 852
Score = 776 bits (2003), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/697 (56%), Positives = 525/697 (75%), Gaps = 18/697 (2%)
Query: 4 ESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTK 63
ESTE G+G G G+ + + L+++G NLT A EGKLDPV+GR +IERV+Q+L RRTK
Sbjct: 150 ESTE-TGSGRGEGTPSSSL-VLDQFGRNLTVQAREGKLDPVIGRGKEIERVMQVLSRRTK 207
Query: 64 NNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERL 123
NNP LIGEPGVGKTA+ EGLAQ I G+VP+T++ K++ TLD+G LVAG++YRG+FEERL
Sbjct: 208 NNPVLIGEPGVGKTAVVEGLAQNIVKGEVPETLKDKQLYTLDLGSLVAGSRYRGDFEERL 267
Query: 124 KKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYR 183
KK+++EIK +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTL+EYR
Sbjct: 268 KKVLKEIKTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIGATTLEEYR 327
Query: 184 KHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQY 243
K+IEKD ALERRFQP++V EPS++ TI+ILKGLR+RYE HH++ TD ALV AA L+ +Y
Sbjct: 328 KYIEKDAALERRFQPIQVGEPSLEHTIEILKGLRDRYEAHHRVSITDGALVQAATLADRY 387
Query: 244 ISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGE 303
I+DRFLPDKAIDLIDEAG+R+R+R P + RE ++++ + ++K A+ QDFE+A
Sbjct: 388 INDRFLPDKAIDLIDEAGARMRIRRMTAPPDLREFDEKIADVRRDKESAIDAQDFERAAR 447
Query: 304 LRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDE 363
LRD E L Q KG+ + + DV V E I +++ WTGIPV K++ +E
Sbjct: 448 LRDEEKTLLGQ------KGEREKQWKDGDLDVVAEVDEEQIAEVLANWTGIPVFKLTEEE 501
Query: 364 SDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELA 423
+ RLL+MEE LHKR+IGQ++AVKA+S+AIRR R GLK+P RP SFIF+GP+GVGK+EL+
Sbjct: 502 TTRLLRMEEELHKRIIGQEDAVKAVSQAIRRTRAGLKDPKRPSGSFIFAGPSGVGKTELS 561
Query: 424 KALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVL 483
KALAA+ FG ++A+I++DM EF +R+T S+L G+PPGYVGY EGGQLTE VRR+P++VVL
Sbjct: 562 KALAAFLFGEDDALIQIDMGEFHDRYTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVVL 621
Query: 484 FDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFD 543
FDEIEKAH +++N +LQ+LEDGRLTD +GRTVDFKNT+LI TSN+G+S I K +GF
Sbjct: 622 FDEIEKAHQEIYNTLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGTSDISK-SVSLGFS 680
Query: 544 LDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFD 603
D + Y ++K V EE+K++FRPEFLNR+D++IVF QLTK ++ E+ D+M+ V
Sbjct: 681 SGGDSTN-RYEKMKQKVNEEMKKHFRPEFLNRIDDIIVFHQLTKEQIIEMVDLMIARVET 739
Query: 604 RLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSV 663
+LK KD+EL++T + + + + G++P GARPLRR I R +ED ++EK+L E++ G +
Sbjct: 740 QLKAKDMELELTPKAKSLLAKRGFDPVLGARPLRRTIQREIEDQLSEKILFGEVQPGQII 799
Query: 664 IVDVDS--------DGNVTVLNGSSGAPESLADPLPV 692
+VDV+ D + P S+ D PV
Sbjct: 800 LVDVEGWNDEEGEKDDKAHFVFRGEARPSSVPDAPPV 836
>gi|257068481|ref|YP_003154736.1| ATPase with chaperone activity, ATP-binding subunit
[Brachybacterium faecium DSM 4810]
gi|256559299|gb|ACU85146.1| ATPase with chaperone activity, ATP-binding subunit
[Brachybacterium faecium DSM 4810]
Length = 879
Score = 776 bits (2003), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/687 (58%), Positives = 526/687 (76%), Gaps = 20/687 (2%)
Query: 11 AGVGGGSSGNKMPTL--EEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCL 68
A GG S G +L +++G NLT+ A EGKLDPV+GR+ + ERV+Q+L RRTKNNP L
Sbjct: 151 ATAGGPSEGQPSGSLVLDQFGRNLTQAAREGKLDPVIGRELEAERVMQVLSRRTKNNPVL 210
Query: 69 IGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLME 128
IGEPGVGK+A+ EGLAQ I +GDVP+T++ K++ TLD+G LVAG++YRG+FEERLKK+++
Sbjct: 211 IGEPGVGKSAVVEGLAQSIVAGDVPETLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLK 270
Query: 129 EIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEK 188
EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTL+EYRKHIEK
Sbjct: 271 EIRTRGDIILFIDEIHTLVGAGAAEGAIDAASILKPMLARGELQTIGATTLEEYRKHIEK 330
Query: 189 DPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRF 248
D ALERRFQP++V +PSV T++ILKGLR+RYE HHK+ TD ALV+AA L+ +Y++DRF
Sbjct: 331 DAALERRFQPIQVDQPSVAHTVEILKGLRDRYEAHHKVTITDAALVAAANLADRYVNDRF 390
Query: 249 LPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDRE 308
LPDKAIDLIDEAG+R+R+R P E +E + + + ++K EA+ GQDFE A LRD E
Sbjct: 391 LPDKAIDLIDEAGARLRIRRLTAPPELKEFDTRIEETRRKKEEAIDGQDFELAASLRDEE 450
Query: 309 MDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLL 368
LK++ KE + E+ V V EV I +++A TGIP+ K++ +ES RLL
Sbjct: 451 QKLKSERDE-----KETAWRHGESDAVTTVSEEV-IAEVLAASTGIPIVKLTEEESSRLL 504
Query: 369 KMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAA 428
ME+ LHKRVIGQDEA+KAISRAIRR R GLK+P RP SFIF+GPTGVGK+ELAKALA
Sbjct: 505 NMEQELHKRVIGQDEAIKAISRAIRRTRAGLKDPKRPGGSFIFAGPTGVGKTELAKALAE 564
Query: 429 YYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIE 488
+ FG EE++I+LDMSEF E+HT S+L GSPPGYVGY EGGQLTE VRR+P++VVLFDE+E
Sbjct: 565 FLFGDEESLIQLDMSEFGEKHTASRLFGSPPGYVGYDEGGQLTEKVRRKPFSVVLFDEVE 624
Query: 489 KAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKG---GRRIGFDLD 545
KAH D+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N+G+ I KG G G L
Sbjct: 625 KAHVDIFNSLLQILEDGRLTDSQGRVVDFKNTIIIMTTNLGTRDIAKGVSIGFTAGGGLS 684
Query: 546 YDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRL 605
D Y R+KS V EELKQ+F+PEFLNR+D+++VF QL+K E+ EI D+ + ++ RL
Sbjct: 685 TD-----YERMKSKVHEELKQHFKPEFLNRVDDVVVFPQLSKEEIVEIVDLEIAKLETRL 739
Query: 606 KTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIV 665
+ +D+ L ++ +E V E+GY+P GARPLRR I R +ED+++E++L +++ GD ++V
Sbjct: 740 RDRDMSLTLSSEAKELVAEKGYDPVLGARPLRRTIQRDIEDTLSERILFGQVQVGDEIVV 799
Query: 666 DVDSDGNVTVLN----GSSGAPESLAD 688
D + +G + L+ G G E++++
Sbjct: 800 DAEGEGLLGELSFSRRGEDGTLEAISE 826
>gi|336120464|ref|YP_004575249.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Microlunatus
phosphovorus NM-1]
gi|334688261|dbj|BAK37846.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Microlunatus
phosphovorus NM-1]
Length = 849
Score = 776 bits (2003), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 384/673 (57%), Positives = 516/673 (76%), Gaps = 15/673 (2%)
Query: 3 GESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRT 62
G+ GA G + + M L+++G NLT+ A E KLDPV+GR+ +IERV+ +L RRT
Sbjct: 147 GKEAATAGAPEQGNAPSSSM-VLDQFGRNLTQAARENKLDPVIGRETEIERVMTVLSRRT 205
Query: 63 KNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEER 122
KNNP LIGEPGVGKTA+ EGL+Q I GDVP+T+ K++ TLD+G LVAG++YRG+FEER
Sbjct: 206 KNNPVLIGEPGVGKTAVVEGLSQAIVRGDVPETLRDKQIYTLDLGALVAGSRYRGDFEER 265
Query: 123 LKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEY 182
LKK+++EI+ +++LFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEY
Sbjct: 266 LKKVLKEIRTRGDVVLFIDEIHTLVGAGAAEGAIDAASILKPMLARGELQTIGATTLDEY 325
Query: 183 RKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQ 242
RK++EKD ALERRFQP++V EPS+ TI IL+GLR+RYE HH++ TDEALV+AAQ++ +
Sbjct: 326 RKYVEKDAALERRFQPIQVAEPSIAHTIDILRGLRDRYEAHHRITITDEALVAAAQMADR 385
Query: 243 YISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAG 302
YISDRFLPDKAIDLIDEAG+R+R+R P + RE ++++ + EK A+ QDFE+A
Sbjct: 386 YISDRFLPDKAIDLIDEAGARLRIRRMTAPPDLREFDEKIAAVRLEKEAAIDAQDFERAA 445
Query: 303 ELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKV 359
LRD E L A S +A+ ++GD+ VV EVD I ++S TGIPV K+
Sbjct: 446 SLRDDEKKLLASRSE--------REAQWKSGDLD-VVAEVDEEIIAEVLSTATGIPVFKL 496
Query: 360 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 419
+ +ES RLL+ME+ L KR IGQ +AV+A+SR+IRR R GLK+P RP SFIF+GP+GVGK
Sbjct: 497 TEEESARLLRMEDELGKRYIGQHDAVRALSRSIRRTRAGLKDPKRPSGSFIFAGPSGVGK 556
Query: 420 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 479
+EL KAL + FG E+A+I+LDMSEF E+HT S+L GSPPGYVGY EGGQLTE VRR+P+
Sbjct: 557 TELTKALTEFLFGDEDALIQLDMSEFSEKHTASRLFGSPPGYVGYEEGGQLTEKVRRKPF 616
Query: 480 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 539
+VVLFDE+EKAHPD+FN +LQIL++GRLTD++GR VDFKNT+++MT+N+G+ I K
Sbjct: 617 SVVLFDEVEKAHPDIFNSLLQILDEGRLTDAQGRVVDFKNTVIVMTTNLGTRDIAK-SVS 675
Query: 540 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 599
+GF D + SY ++K+ V +ELKQ+FRPEFLNR+DE++VFRQLT+ +++ I D+M+
Sbjct: 676 LGFSQAGD-AEGSYEKMKAKVADELKQHFRPEFLNRVDEIVVFRQLTQADIERIVDLMVA 734
Query: 600 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 659
++ RLK KD+ +++T + + + G++P GARPLRRA+ R +ED +AEK+L E+K
Sbjct: 735 QIEIRLKDKDMGIELTPAAKTLIAKRGFDPVLGARPLRRALQRDIEDMLAEKILFSEVKS 794
Query: 660 GDSVIVDVDSDGN 672
G V+VDV G+
Sbjct: 795 GQIVVVDVADPGS 807
>gi|414579681|ref|ZP_11436824.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 5S-1215]
gi|420886598|ref|ZP_15349958.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 5S-0421]
gi|420889758|ref|ZP_15353106.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 5S-0422]
gi|420892602|ref|ZP_15355946.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 5S-0708]
gi|420899862|ref|ZP_15363193.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 5S-0817]
gi|420908077|ref|ZP_15371395.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 5S-1212]
gi|420934689|ref|ZP_15397962.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium massiliense 1S-151-0930]
gi|420939997|ref|ZP_15403264.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium massiliense 1S-153-0915]
gi|420945254|ref|ZP_15408507.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium massiliense 1S-154-0310]
gi|420959184|ref|ZP_15422418.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium massiliense 2B-0107]
gi|420960066|ref|ZP_15423297.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium massiliense 2B-1231]
gi|420970045|ref|ZP_15433246.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 5S-0921]
gi|421000598|ref|ZP_15463731.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium massiliense 2B-0912-S]
gi|392082361|gb|EIU08187.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 5S-0421]
gi|392087506|gb|EIU13328.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 5S-0422]
gi|392097223|gb|EIU23017.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 5S-0817]
gi|392105981|gb|EIU31767.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 5S-1212]
gi|392108483|gb|EIU34263.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 5S-0708]
gi|392124205|gb|EIU49966.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 5S-1215]
gi|392133101|gb|EIU58846.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium massiliense 1S-151-0930]
gi|392156859|gb|EIU82557.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium massiliense 1S-153-0915]
gi|392158462|gb|EIU84158.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium massiliense 1S-154-0310]
gi|392175983|gb|EIV01644.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 5S-0921]
gi|392202752|gb|EIV28348.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium massiliense 2B-0912-S]
gi|392248910|gb|EIV74386.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium massiliense 2B-0107]
gi|392257278|gb|EIV82732.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium massiliense 2B-1231]
Length = 823
Score = 776 bits (2003), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/648 (58%), Positives = 509/648 (78%), Gaps = 15/648 (2%)
Query: 25 LEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLA 84
L+++G NLT A EGKLDPV+GR+ +IERV+Q+L RRTKNNP LIGEPGVGKTA+ EGLA
Sbjct: 150 LDQFGRNLTAAAMEGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLA 209
Query: 85 QRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVH 144
Q I G+VP+T++ K++ TLD+G LVAG++YRG+FEERLKK+++EI +IILFIDE+H
Sbjct: 210 QAIVHGEVPETLKNKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDELH 269
Query: 145 TLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEP 204
TL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEYRK+IEKD ALERRFQPV+V EP
Sbjct: 270 TLVGAGAAEGAIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEP 329
Query: 205 SVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRV 264
+V+ TI+ILKGLR+RYE HH++ TD ALV+AA L+ +YI+DRFLPDKAIDLIDEAG+R+
Sbjct: 330 TVEHTIEILKGLRDRYEAHHRVSITDGALVAAATLADRYINDRFLPDKAIDLIDEAGARM 389
Query: 265 RLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKE 324
R+R P + RE ++++ +EK A+ QDFEKA LRD E L AQ + D+ K+
Sbjct: 390 RIRRMTAPPDLREFDEKIADARREKESAIDAQDFEKAARLRDSEKQLVAQRA---DREKQ 446
Query: 325 MSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQ 381
+GD+ VV EVD I ++ WTGIPV K++ +E+ RLL+ME+ LHKR+IGQ
Sbjct: 447 W-----RSGDL-DVVAEVDDEQIAEVLGNWTGIPVFKLTEEETTRLLRMEDELHKRIIGQ 500
Query: 382 DEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLD 441
++AVKA+S+AIRR R GLK+P RP SFIF+GP+GVGK+EL+KALA + FG ++A+I++D
Sbjct: 501 EDAVKAVSKAIRRTRAGLKDPRRPSGSFIFAGPSGVGKTELSKALANFLFGDDDALIQID 560
Query: 442 MSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQI 501
M EF +R T S+L G+PPGYVGY EGGQLTE VRR+P++VVLFDEIEKAH +++N +LQ+
Sbjct: 561 MGEFHDRFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNTLLQV 620
Query: 502 LEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVT 561
LEDGRLTD +GRTVDFKNT+LI TSN+G+S I K +G S+Y R+K V
Sbjct: 621 LEDGRLTDGQGRTVDFKNTVLIFTSNLGTSDISKA---VGLGFSEGAAGSNYERMKQKVH 677
Query: 562 EELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRER 621
+ELK++FRPEFLNR+D++IVF QLT+ ++ E+ D+M+ V +LKTKD+ +++T++ +
Sbjct: 678 DELKKHFRPEFLNRIDDIIVFEQLTQEQIIEMVDLMIGRVGKQLKTKDMAMELTDKAKSL 737
Query: 622 VVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDS 669
+ + G++P GARPLRR I R +ED+++EK+L E+ G+ V VDV++
Sbjct: 738 LAKRGFDPVLGARPLRRTIQREIEDALSEKILFNEVGPGELVTVDVEN 785
>gi|359773810|ref|ZP_09277200.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Gordonia
effusa NBRC 100432]
gi|359309092|dbj|GAB19978.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Gordonia
effusa NBRC 100432]
Length = 848
Score = 776 bits (2003), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 388/666 (58%), Positives = 515/666 (77%), Gaps = 18/666 (2%)
Query: 11 AGVGGGSSGNKMPT----LEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNP 66
AG GG S+ P+ L+++G NLT A EGKLDPV+GR+ +IERV+Q+L RRTKNNP
Sbjct: 153 AGTGGRSTEAGSPSTSLVLDQFGRNLTAAAGEGKLDPVIGREKEIERVMQVLSRRTKNNP 212
Query: 67 CLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKL 126
LIGEPGVGKTA+ EGLAQ I +G+VP+T++ K++ TLD+G LVAG++YRG+FEERLKK+
Sbjct: 213 VLIGEPGVGKTAVVEGLAQAIVNGNVPETLKDKQLYTLDLGSLVAGSRYRGDFEERLKKV 272
Query: 127 MEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHI 186
++EI +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEYRK+I
Sbjct: 273 LKEINTRGDIILFIDELHTLVGAGAAEGAIDAASILKPKLARGELQTIGATTLDEYRKYI 332
Query: 187 EKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISD 246
EKD ALERRFQPV+V EPSV+ TI+ILKGLR+RYE HH++ TD ALV+AA L+ +YI+D
Sbjct: 333 EKDAALERRFQPVQVGEPSVEHTIEILKGLRDRYESHHRVSITDGALVAAATLADRYIND 392
Query: 247 RFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRD 306
RFLPDKAIDLIDEAG+R+R+R P + RE + + KEK A+ QDFEKA LRD
Sbjct: 393 RFLPDKAIDLIDEAGARMRIRRMTAPPDLREFDDRIADARKEKESAIDAQDFEKAASLRD 452
Query: 307 REMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKVSTDE 363
+E L A+ + + + +GD+ VV EVD I ++ WTGIPV K++ +E
Sbjct: 453 KEKTLVAE--------RAEREKQWRSGDM-DVVAEVDDEQIAEVLGNWTGIPVFKLTEEE 503
Query: 364 SDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELA 423
+ RLL+ME+ LHKR+IGQ++AVKA+S+AIRR R GLK+P RP SFIF+GP+GVGK+EL+
Sbjct: 504 TTRLLRMEDELHKRIIGQEDAVKAVSKAIRRTRAGLKDPKRPSGSFIFAGPSGVGKTELS 563
Query: 424 KALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVL 483
KALA + FG ++A+I++DM EF +R T S+L G+PPGYVGY EGGQLTE VRR+P++VVL
Sbjct: 564 KALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVVL 623
Query: 484 FDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFD 543
FDEIEKAH +++N +LQ+LEDGRLTD +GRTVDFKNT+LI TSN+G+S I K +GF
Sbjct: 624 FDEIEKAHQEIYNTLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGTSDISK-AVGLGF- 681
Query: 544 LDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFD 603
D+ S+Y R+K V +ELK++FRPEFLNR+D+++VF QLT+ E+ ++ D+ML V
Sbjct: 682 TKGDDSTSNYERMKLKVNDELKKHFRPEFLNRIDDIVVFHQLTQEEIIQMVDLMLNRVEG 741
Query: 604 RLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSV 663
LK KD+ ++VT++ + + + G++P GARPLRR I R +ED ++EK+L +I G V
Sbjct: 742 ALKNKDMAIEVTDKAKSLLSKRGFDPVLGARPLRRTIQREIEDQLSEKILFGDITPGQIV 801
Query: 664 IVDVDS 669
+VDV++
Sbjct: 802 LVDVEN 807
>gi|375097571|ref|ZP_09743836.1| ATPase with chaperone activity, ATP-binding subunit
[Saccharomonospora marina XMU15]
gi|374658304|gb|EHR53137.1| ATPase with chaperone activity, ATP-binding subunit
[Saccharomonospora marina XMU15]
Length = 849
Score = 776 bits (2003), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/669 (57%), Positives = 517/669 (77%), Gaps = 15/669 (2%)
Query: 3 GESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRT 62
G+ G G G G+ + + L+++G NLT A EGKLDPV+GR +IERV+Q+L RRT
Sbjct: 147 GKEPAEAGTGRGEGTPSSSL-VLDQFGRNLTASAREGKLDPVIGRSKEIERVMQVLSRRT 205
Query: 63 KNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEER 122
KNNP LIGEPGVGKTA+ EGLAQ I G+VP+T++ K++ TLD+G LVAG++YRG+FEER
Sbjct: 206 KNNPVLIGEPGVGKTAVVEGLAQNIVKGEVPETLKDKQLYTLDLGSLVAGSRYRGDFEER 265
Query: 123 LKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEY 182
LKK+++EIK +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTL+EY
Sbjct: 266 LKKVLKEIKTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIGATTLEEY 325
Query: 183 RKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQ 242
RK+IEKD ALERRFQP++V EPS++ TI+ILKGLR+RYE HH++ TD ALV+AA L+ +
Sbjct: 326 RKYIEKDAALERRFQPIQVGEPSLEHTIEILKGLRDRYEAHHRVSITDSALVAAATLADR 385
Query: 243 YISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAG 302
YI+DRFLPDKAIDLIDEAG+R+R+R P + RE ++++ + +EK A+ QDFE+A
Sbjct: 386 YINDRFLPDKAIDLIDEAGARMRIRRMTAPPDLREFDEKIADVRREKESAIDAQDFERAA 445
Query: 303 ELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKV 359
LRD E L Q S + K+ GD+ VV EVD I +++ WTGIPV K+
Sbjct: 446 RLRDEEKTLLGQKSEREKQWKD--------GDL-DVVAEVDDEQIAEVLANWTGIPVFKL 496
Query: 360 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 419
+ +E+ RLL+ME LHKR+IGQ++AVKA+S+AIRR R GLK+P RP SFIF+GP+GVGK
Sbjct: 497 TEEETTRLLRMETELHKRIIGQEDAVKAVSQAIRRTRAGLKDPKRPSGSFIFAGPSGVGK 556
Query: 420 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 479
+EL+KALA + FG ++A+I++DM EF +R+T S+L G+PPGYVGY EGGQLTE VRR+P+
Sbjct: 557 TELSKALANFLFGEDDALIQIDMGEFHDRYTASRLFGAPPGYVGYEEGGQLTEKVRRKPF 616
Query: 480 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 539
+VVLFDEIEKAH +++N +LQ+LEDGRLTD +GRTVDFKNT+LI TSN+G+ I K
Sbjct: 617 SVVLFDEIEKAHQEIYNTLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGTQDISK-SVS 675
Query: 540 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 599
+GF DE S Y ++K V EE+K++FRPEFLNR+D++IVF QLT+ ++ E+ D+M+
Sbjct: 676 LGFSSGSDE-GSRYEKMKQKVNEEMKKHFRPEFLNRIDDIIVFHQLTQDQIIEMVDLMVT 734
Query: 600 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 659
V +LK KD+EL++T++ + + + G++P GARPLRR I R +ED ++EK+L E++
Sbjct: 735 RVEGQLKGKDMELELTDKAKALLAKRGFDPVLGARPLRRTIQREIEDQLSEKILFGEVQP 794
Query: 660 GDSVIVDVD 668
G +IVDVD
Sbjct: 795 GQIIIVDVD 803
>gi|311112373|ref|YP_003983595.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Rothia
dentocariosa ATCC 17931]
gi|310943867|gb|ADP40161.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Rothia
dentocariosa ATCC 17931]
Length = 850
Score = 776 bits (2003), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/668 (57%), Positives = 516/668 (77%), Gaps = 17/668 (2%)
Query: 11 AGVGGGSSGNKMPT----LEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNP 66
AGVG G+S P L+++G NLT A EG+LDPV+GR ++ERV+Q+L RRTKNNP
Sbjct: 155 AGVGAGNSREGTPAGSTILDQFGRNLTAAAREGQLDPVIGRHHEMERVMQVLSRRTKNNP 214
Query: 67 CLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKL 126
LIGEPGVGKTA+ EGLAQ I GDVP+T++ K + TLD+G LVAG++YRG+FEERLKK+
Sbjct: 215 VLIGEPGVGKTAVVEGLAQAIVHGDVPETLKDKHLYTLDLGSLVAGSRYRGDFEERLKKV 274
Query: 127 MEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHI 186
++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEYRKHI
Sbjct: 275 LKEIRTRGDIILFIDEIHTLVGAGAAEGAIDAASILKPMLARGELQTIGATTLDEYRKHI 334
Query: 187 EKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISD 246
EKD ALERRFQP++V EPS + +QILKG+R++YE HH++ TDE++ +A L+ +YISD
Sbjct: 335 EKDAALERRFQPIQVDEPSQELAVQILKGVRDKYEAHHRVTITDESIEAAVNLAARYISD 394
Query: 247 RFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRD 306
RFLPDKA+DLIDEAG+R+R++ P E + L+++ ++ +K +A++GQD+EKA LRD
Sbjct: 395 RFLPDKAVDLIDEAGARLRIKRMTAPPEIKILDEKASKLRTQKEDAIKGQDYEKAAALRD 454
Query: 307 REMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDR 366
+E + A+ + E KA E GD VT I ++++ TG+PV K++ +ES R
Sbjct: 455 QEQKVLAEKA-------EAEKAWRENGDAFGEVTPEVISEVLASSTGVPVYKITEEESSR 507
Query: 367 LLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKAL 426
L+KME+ LHKRVIGQD A+KA+SRAIRR R GLK+P RP SFIF+GPTGVGK+ELAKAL
Sbjct: 508 LIKMEDELHKRVIGQDNAIKALSRAIRRTRAGLKDPRRPGGSFIFAGPTGVGKTELAKAL 567
Query: 427 AAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDE 486
A + FG E+A+I LDMSE+ E+HTVS+L G+PPGYVGY EGGQLTE VRR+P++VVLFDE
Sbjct: 568 AEFLFGDEDALITLDMSEYQEKHTVSRLFGAPPGYVGYDEGGQLTEKVRRKPFSVVLFDE 627
Query: 487 IEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR--IGFDL 544
+EKAH D+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N+GS + RR +GF
Sbjct: 628 VEKAHTDLFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNLGSRDV---NRRVPVGFQA 684
Query: 545 DYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDR 604
D D+ Y R+++ V E LK++FRPEFLNR+D++IVF QL++ E+ +I D+ + + R
Sbjct: 685 -MDHGDADYERMQARVMENLKEHFRPEFLNRVDDIIVFPQLSENEILQIVDLFVGRLAKR 743
Query: 605 LKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVI 664
L +++ +++T+ + + +GY+P+ GARPLRR + R +ED+++EK+L EIK G+ +
Sbjct: 744 LADQEMSIELTDAAKVLMASKGYDPAMGARPLRREMQRNIEDALSEKILFGEIKPGEKIT 803
Query: 665 VDVDSDGN 672
V V+ +G+
Sbjct: 804 VGVEGEGD 811
>gi|365868512|ref|ZP_09408063.1| ATP-dependent Clp protease ATP-binding subunit [Mycobacterium
massiliense CCUG 48898 = JCM 15300]
gi|397678519|ref|YP_006520054.1| ATP-dependent Clp protease ATP-binding subunit [Mycobacterium
massiliense str. GO 06]
gi|418252108|ref|ZP_12878120.1| ATP-dependent Clp protease ATP-binding subunit [Mycobacterium
abscessus 47J26]
gi|419710796|ref|ZP_14238260.1| ATP-dependent Clp protease ATP-binding subunit [Mycobacterium
abscessus M93]
gi|419713561|ref|ZP_14240985.1| ATP-dependent Clp protease ATP-binding subunit [Mycobacterium
abscessus M94]
gi|420878246|ref|ZP_15341613.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 5S-0304]
gi|420935189|ref|ZP_15398459.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium massiliense 1S-152-0914]
gi|420950195|ref|ZP_15413442.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium massiliense 2B-0626]
gi|420995114|ref|ZP_15458260.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium massiliense 2B-0307]
gi|420996080|ref|ZP_15459223.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium massiliense 2B-0912-R]
gi|421047351|ref|ZP_15510349.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium massiliense CCUG 48898 = JCM 15300]
gi|353448368|gb|EHB96773.1| ATP-dependent Clp protease ATP-binding subunit [Mycobacterium
abscessus 47J26]
gi|364000603|gb|EHM21801.1| ATP-dependent Clp protease ATP-binding subunit [Mycobacterium
massiliense CCUG 48898 = JCM 15300]
gi|382939686|gb|EIC64012.1| ATP-dependent Clp protease ATP-binding subunit [Mycobacterium
abscessus M93]
gi|382946259|gb|EIC70545.1| ATP-dependent Clp protease ATP-binding subunit [Mycobacterium
abscessus M94]
gi|392083155|gb|EIU08980.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 5S-0304]
gi|392146696|gb|EIU72417.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium massiliense 1S-152-0914]
gi|392165281|gb|EIU90968.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium massiliense 2B-0626]
gi|392181216|gb|EIV06868.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium massiliense 2B-0307]
gi|392191900|gb|EIV17525.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium massiliense 2B-0912-R]
gi|392243903|gb|EIV69386.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium massiliense CCUG 48898]
gi|395456784|gb|AFN62447.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium massiliense str. GO 06]
Length = 844
Score = 776 bits (2003), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/648 (58%), Positives = 509/648 (78%), Gaps = 15/648 (2%)
Query: 25 LEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLA 84
L+++G NLT A EGKLDPV+GR+ +IERV+Q+L RRTKNNP LIGEPGVGKTA+ EGLA
Sbjct: 171 LDQFGRNLTAAAMEGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLA 230
Query: 85 QRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVH 144
Q I G+VP+T++ K++ TLD+G LVAG++YRG+FEERLKK+++EI +IILFIDE+H
Sbjct: 231 QAIVHGEVPETLKNKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDELH 290
Query: 145 TLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEP 204
TL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEYRK+IEKD ALERRFQPV+V EP
Sbjct: 291 TLVGAGAAEGAIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEP 350
Query: 205 SVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRV 264
+V+ TI+ILKGLR+RYE HH++ TD ALV+AA L+ +YI+DRFLPDKAIDLIDEAG+R+
Sbjct: 351 TVEHTIEILKGLRDRYEAHHRVSITDGALVAAATLADRYINDRFLPDKAIDLIDEAGARM 410
Query: 265 RLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKE 324
R+R P + RE ++++ +EK A+ QDFEKA LRD E L AQ + D+ K+
Sbjct: 411 RIRRMTAPPDLREFDEKIADARREKESAIDAQDFEKAARLRDSEKQLVAQRA---DREKQ 467
Query: 325 MSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQ 381
+GD+ VV EVD I ++ WTGIPV K++ +E+ RLL+ME+ LHKR+IGQ
Sbjct: 468 W-----RSGDL-DVVAEVDDEQIAEVLGNWTGIPVFKLTEEETTRLLRMEDELHKRIIGQ 521
Query: 382 DEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLD 441
++AVKA+S+AIRR R GLK+P RP SFIF+GP+GVGK+EL+KALA + FG ++A+I++D
Sbjct: 522 EDAVKAVSKAIRRTRAGLKDPRRPSGSFIFAGPSGVGKTELSKALANFLFGDDDALIQID 581
Query: 442 MSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQI 501
M EF +R T S+L G+PPGYVGY EGGQLTE VRR+P++VVLFDEIEKAH +++N +LQ+
Sbjct: 582 MGEFHDRFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNTLLQV 641
Query: 502 LEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVT 561
LEDGRLTD +GRTVDFKNT+LI TSN+G+S I K +G S+Y R+K V
Sbjct: 642 LEDGRLTDGQGRTVDFKNTVLIFTSNLGTSDISKA---VGLGFSEGAAGSNYERMKQKVH 698
Query: 562 EELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRER 621
+ELK++FRPEFLNR+D++IVF QLT+ ++ E+ D+M+ V +LKTKD+ +++T++ +
Sbjct: 699 DELKKHFRPEFLNRIDDIIVFEQLTQEQIIEMVDLMIGRVGKQLKTKDMAMELTDKAKSL 758
Query: 622 VVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDS 669
+ + G++P GARPLRR I R +ED+++EK+L E+ G+ V VDV++
Sbjct: 759 LAKRGFDPVLGARPLRRTIQREIEDALSEKILFNEVGPGELVTVDVEN 806
>gi|406573371|ref|ZP_11049123.1| Clp-family ATP-binding protease [Janibacter hoylei PVAS-1]
gi|404557303|gb|EKA62753.1| Clp-family ATP-binding protease [Janibacter hoylei PVAS-1]
Length = 839
Score = 776 bits (2003), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/673 (57%), Positives = 520/673 (77%), Gaps = 16/673 (2%)
Query: 24 TLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGL 83
L+++G NLT+ A +G+LDPV+GR +IERV+Q+L RRTKNNP LIGEPGVGK+A+ EGL
Sbjct: 172 VLDQFGRNLTQAARDGQLDPVIGRGQEIERVMQVLSRRTKNNPVLIGEPGVGKSAVVEGL 231
Query: 84 AQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEV 143
AQ I +VP+ ++ K++ TLD+G LVAG++YRG+FEERLKK+++EIK +IILFIDE+
Sbjct: 232 AQDIVDDNVPEPLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEIKTRGDIILFIDEI 291
Query: 144 HTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPE 203
HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEYRKHIEKD ALERRFQP++V E
Sbjct: 292 HTLVGAGAAEGAIDAASILKPMLARGELQTIGATTLDEYRKHIEKDSALERRFQPIQVAE 351
Query: 204 PSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSR 263
P++ I++LKGLR+RYE HHK+ TD A+V+A ++ +YI+DRFLPDKAIDLIDEAG+R
Sbjct: 352 PTLPHAIEMLKGLRDRYEAHHKVTITDPAIVAAVTMADRYINDRFLPDKAIDLIDEAGAR 411
Query: 264 VRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGK 323
+R+R P E +E + ++ ++ EK A+ GQDFEKA LRD E +L A+ K
Sbjct: 412 LRIRRMTAPPELKEYDDKIAKVRLEKESAIDGQDFEKAAALRDDEKNLLAE--------K 463
Query: 324 EMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIG 380
+AE +AGD+ VV EVD I +++A TGIPV K+S +ES RLL ME LHKRV+G
Sbjct: 464 AKREAEWKAGDMD-VVAEVDEELIAEVLAASTGIPVFKLSEEESTRLLNMEAELHKRVVG 522
Query: 381 QDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRL 440
D+A+KA+S+AIRR R GLK+P RP SFIF+GPTGVGK+ELAKAL+ + FG E+++I L
Sbjct: 523 NDDAIKALSQAIRRTRAGLKDPRRPGGSFIFAGPTGVGKTELAKALSEFLFGDEDSLITL 582
Query: 441 DMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQ 500
DMSE+ E+HTVS+L GSPPGYVGY EGGQLTE VRR+P++VVLFDE+EKAHP++FN +LQ
Sbjct: 583 DMSEYSEKHTVSRLFGSPPGYVGYDEGGQLTEKVRRKPFSVVLFDEVEKAHPEIFNSLLQ 642
Query: 501 ILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLV 560
+LEDGRLTDS+GR VDFKNT++IMT+N+G+ I KG +GF D++ + Y R+K+ V
Sbjct: 643 VLEDGRLTDSQGRMVDFKNTVIIMTTNLGTRDISKGA--MGFTSGTDQR-TDYERMKAKV 699
Query: 561 TEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRE 620
T+ELKQ+FRPEFLNR+D+ IVF QL++ E+ +I D+ + ++ RLK KD+ +++T +E
Sbjct: 700 TDELKQHFRPEFLNRVDDTIVFPQLSQEEIVQIVDLEVAKLDQRLKDKDMGIELTPAAKE 759
Query: 621 RVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNGSS 680
+ + GY+P GARPL+R I R +ED ++EK+L E+ G+ V VDV+ +G V
Sbjct: 760 LLAKRGYDPVLGARPLKRTIQREIEDVLSEKILFGELTAGEIVAVDVEGEGKAAVFT-FH 818
Query: 681 GAPESLADPLPVV 693
GAP+ +P+V
Sbjct: 819 GAPKVGELDIPLV 831
>gi|118472509|ref|YP_890312.1| negative regulator of genetic competence ClpC/mecB [Mycobacterium
smegmatis str. MC2 155]
gi|399990311|ref|YP_006570661.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium
smegmatis str. MC2 155]
gi|118173796|gb|ABK74692.1| negative regulator of genetic competence ClpC/mecB [Mycobacterium
smegmatis str. MC2 155]
gi|399234873|gb|AFP42366.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium
smegmatis str. MC2 155]
Length = 848
Score = 776 bits (2003), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 379/648 (58%), Positives = 507/648 (78%), Gaps = 15/648 (2%)
Query: 24 TLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGL 83
L+++G NLT A EGKLDPV+GR+ +IERV+Q+L RRTKNNP LIGEPGVGKTA+ EGL
Sbjct: 170 VLDQFGRNLTAAAMEGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGL 229
Query: 84 AQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEV 143
AQ I G+VP+T++ K++ TLD+G LVAG++YRG+FEERLKK+++EI +IILFIDE+
Sbjct: 230 AQAIVHGEVPETLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDEL 289
Query: 144 HTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPE 203
HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEYRK+IEKD ALERRFQPV+V E
Sbjct: 290 HTLVGAGAAEGAIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGE 349
Query: 204 PSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSR 263
P+V+ TI+ILKGLR+RYE HH++ TD A+V+AA L+ +YI+DRFLPDKAIDLIDEAG+R
Sbjct: 350 PTVEHTIEILKGLRDRYEAHHRVSITDSAMVAAATLADRYINDRFLPDKAIDLIDEAGAR 409
Query: 264 VRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGK 323
+R+R P + RE ++++ +EK A+ QDFEKA LRD+E L AQ +
Sbjct: 410 MRIRRMTAPPDLREFDEKIADARREKESAIDAQDFEKAAALRDKEKQLVAQ--------R 461
Query: 324 EMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIG 380
+ + +GD+ VV EVD I ++ WTGIPV K++ +E+ RLL+MEE LHKR+IG
Sbjct: 462 AEREKQWRSGDL-DVVAEVDDEQIAEVLGNWTGIPVFKLTEEETTRLLRMEEELHKRIIG 520
Query: 381 QDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRL 440
Q++AVKA+S+AIRR R GLK+P RP SFIF+GP+GVGK+EL+KALA + FG ++A+I++
Sbjct: 521 QEDAVKAVSKAIRRTRAGLKDPKRPSGSFIFAGPSGVGKTELSKALANFLFGDDDALIQI 580
Query: 441 DMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQ 500
DM EF +R T S+L G+PPGYVGY EGGQLTE VRR+P++VVLFDEIEKAH +++N +LQ
Sbjct: 581 DMGEFHDRFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNSLLQ 640
Query: 501 ILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLV 560
+LEDGRLTD +GRTVDFKNT+LI TSN+G+S I K +G +++Y R+K V
Sbjct: 641 VLEDGRLTDGQGRTVDFKNTVLIFTSNLGTSDISKA---VGLGFSQGGSENNYERMKQKV 697
Query: 561 TEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRE 620
+ELK++FRPEFLNR+D++IVF QLT+ E+ ++ D+M+ V ++LKTKD+ L+++++ +
Sbjct: 698 HDELKKHFRPEFLNRIDDIIVFHQLTQDEIIQMVDLMIGRVSNQLKTKDMALELSDKAKA 757
Query: 621 RVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVD 668
+ + G++P GARPLRR I R +ED ++EK+L EI G V VDV+
Sbjct: 758 LLAKRGFDPVLGARPLRRTIQREIEDQLSEKILFEEIGPGQLVTVDVE 805
>gi|386852989|ref|YP_006271002.1| Chaperone protein clpB [Actinoplanes sp. SE50/110]
gi|359840493|gb|AEV88934.1| Chaperone protein clpB [Actinoplanes sp. SE50/110]
Length = 840
Score = 775 bits (2002), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/650 (59%), Positives = 517/650 (79%), Gaps = 14/650 (2%)
Query: 24 TLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGL 83
L+++G NLT+ A EGKLDPV+GR+ +IERV+Q+L RRTKNNP LIGEPGVGKTA+ EGL
Sbjct: 167 VLDQFGRNLTQAAREGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGL 226
Query: 84 AQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEV 143
+Q I G+VP+T++ K++ TLD+G LVAG++YRG+FEERLKK+++EI+ +IILFIDE+
Sbjct: 227 SQSIVKGEVPETLKDKQLYTLDLGALVAGSRYRGDFEERLKKVLKEIRTRGDIILFIDEI 286
Query: 144 HTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPE 203
HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEYRKH+EKD ALERRFQP++V E
Sbjct: 287 HTLVGAGAAEGAIDAASILKPMLARGELQTIGATTLDEYRKHLEKDAALERRFQPIQVGE 346
Query: 204 PSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSR 263
PS+ TI+ILKGLR+RYE HH++ TD ALV+AA L+ +YISDRFLPDKAIDLIDEAG+R
Sbjct: 347 PSLAHTIEILKGLRDRYEAHHRISITDAALVAAATLADRYISDRFLPDKAIDLIDEAGAR 406
Query: 264 VRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGK 323
+R+R P + R+ ++ + Q+ ++K A+ QDFE+A +LRD+E L Q K
Sbjct: 407 MRIRRMTAPPDLRDFDERIAQVRRDKESAIDAQDFERAAQLRDKEKQLLGQ--------K 458
Query: 324 EMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIG 380
+ E +AGD+ VV+EVD I ++ WTGIPV K++ +E+ RLL+ME+ LHKRVIG
Sbjct: 459 AQREKEWKAGDL-DVVSEVDDEQIAEVLGNWTGIPVYKLTEEETSRLLRMEDELHKRVIG 517
Query: 381 QDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRL 440
Q++AVKA+S+AIRR R GLK+P RP SFIF+GP+GVGK+EL+KALA + FGSE+A+I+L
Sbjct: 518 QEDAVKAVSKAIRRTRAGLKDPKRPSGSFIFAGPSGVGKTELSKALAEFLFGSEDALIQL 577
Query: 441 DMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQ 500
DMSEF +R+TVS+L+G+PPGYVGY EGGQLTE VRR+P++VVLFDEIEKAHPDVFN +LQ
Sbjct: 578 DMSEFHDRYTVSRLVGAPPGYVGYDEGGQLTEKVRRKPFSVVLFDEIEKAHPDVFNTLLQ 637
Query: 501 ILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLV 560
ILEDGRLTD +GR VDFKNT++I+T+N+G+ + K +GF D +S+Y+R+K V
Sbjct: 638 ILEDGRLTDGQGRIVDFKNTVIILTTNLGTRDVAK-AVSLGFQASED-TESNYDRMKVKV 695
Query: 561 TEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRE 620
+ELKQ+FRPEFLNR+D+ IVF QL + E+ +I DI + +LK KD+ L++T+ ++
Sbjct: 696 NDELKQHFRPEFLNRIDDTIVFHQLREQEILQIVDIFTARIEGQLKNKDMGLELTDNAKK 755
Query: 621 RVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSD 670
+ ++G++P GARPLRR I R LED+++E++L E++ G V+VD + D
Sbjct: 756 YLAKKGFDPVLGARPLRRTIQRELEDTLSEQILFNELRPGQIVVVDCEGD 805
>gi|453364329|dbj|GAC79902.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Gordonia
malaquae NBRC 108250]
Length = 848
Score = 775 bits (2002), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/665 (58%), Positives = 520/665 (78%), Gaps = 18/665 (2%)
Query: 11 AGVGGGSSGNKMPT----LEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNP 66
AG GG S+ + P+ L+++G NLT A EGKLDPV+GR+ ++ER++Q+L RRTKNNP
Sbjct: 153 AGTGGRSNDSGTPSTSLVLDQFGRNLTTAASEGKLDPVIGREKEVERIMQVLSRRTKNNP 212
Query: 67 CLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKL 126
LIGEPGVGKTA+ EGLAQ I SG+VP+T++ K++ TLD+G LVAG++YRG+FEERLKK+
Sbjct: 213 VLIGEPGVGKTAVVEGLAQAIVSGNVPETLKDKQLYTLDLGSLVAGSRYRGDFEERLKKV 272
Query: 127 MEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHI 186
++EI +IILFIDE+H L+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEYRK+I
Sbjct: 273 LKEINTRGDIILFIDELHQLVGAGAAEGAIDAASILKPKLARGELQTIGATTLDEYRKYI 332
Query: 187 EKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISD 246
EKD ALERRFQPV+V EPSV+ TI+ILKGLR+RYE HHK+ TD AL +AA L+ +YI+D
Sbjct: 333 EKDAALERRFQPVQVGEPSVEHTIEILKGLRDRYEQHHKVSITDGALAAAASLADRYIND 392
Query: 247 RFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRD 306
RFLPDKAIDLIDEAG+R+R+R P + RE + + KEK A+ QDFEKA LRD
Sbjct: 393 RFLPDKAIDLIDEAGARMRIRRMTAPPDLREFDDRIADARKEKESAIDAQDFEKAASLRD 452
Query: 307 REMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKVSTDE 363
+E L +S ++ K+ AGD+ +V+EVD I ++ WTGIPV K++ +E
Sbjct: 453 KEKKL---VSERAEREKQW-----RAGDL-DIVSEVDDEQIAEVLGNWTGIPVFKLTEEE 503
Query: 364 SDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELA 423
+ RLL+ME+ LHKR+IGQ++AVKA+S+AIRR R GLK+P RP SFIF+GP+GVGK+EL+
Sbjct: 504 TKRLLRMEDELHKRIIGQEDAVKAVSKAIRRTRAGLKDPKRPSGSFIFAGPSGVGKTELS 563
Query: 424 KALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVL 483
KALA + FG ++A+I++DM EF +R T S+L G+PPGYVGY EGGQLTE VRR+P++VVL
Sbjct: 564 KALANFLFGEDDALIQIDMGEFHDRFTASRLFGAPPGYVGYDEGGQLTEKVRRKPFSVVL 623
Query: 484 FDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFD 543
FDEIEKAHP+++N +LQ+LEDGRLTD +GRTVDFKNT+LI TSN+G+S I K +GF
Sbjct: 624 FDEIEKAHPEIYNTLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGTSDISK-AVGMGFS 682
Query: 544 LDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFD 603
D D + S+Y+R+K V +ELK++FRPEFLNR+D++IVF QL + E+ E+ D+M+ V
Sbjct: 683 KD-DGRGSNYDRMKQKVNDELKKHFRPEFLNRIDDVIVFHQLKQDEILEMVDLMIGRVEK 741
Query: 604 RLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSV 663
+LK KD+E+++TE+ + + + G++P GARPLRR I R +ED ++EK+L EIK G +
Sbjct: 742 QLKNKDMEIELTEKAKNLLAKRGFDPVLGARPLRRTIQREIEDQLSEKILFEEIKGGQII 801
Query: 664 IVDVD 668
+VDV+
Sbjct: 802 LVDVE 806
>gi|420914407|ref|ZP_15377714.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 6G-0125-S]
gi|420987968|ref|ZP_15451124.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 4S-0206]
gi|421034730|ref|ZP_15497751.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 3A-0930-S]
gi|392125407|gb|EIU51163.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 6G-0125-S]
gi|392182247|gb|EIV07898.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 4S-0206]
gi|392228051|gb|EIV53564.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 3A-0930-S]
Length = 823
Score = 775 bits (2002), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/648 (58%), Positives = 509/648 (78%), Gaps = 15/648 (2%)
Query: 25 LEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLA 84
L+++G NLT A EGKLDPV+GR+ +IERV+Q+L RRTKNNP LIGEPGVGKTA+ EGLA
Sbjct: 150 LDQFGRNLTAAAMEGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLA 209
Query: 85 QRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVH 144
Q I G+VP+T++ K++ TLD+G LVAG++YRG+FEERLKK+++EI +IILFIDE+H
Sbjct: 210 QAIVHGEVPETLKNKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDELH 269
Query: 145 TLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEP 204
TL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEYRK+IEKD ALERRFQPV+V EP
Sbjct: 270 TLVGAGAAEGAIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEP 329
Query: 205 SVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRV 264
+V+ TI+ILKGLR+RYE HH++ TD ALV+AA L+ +YI+DRFLPDKAIDLIDEAG+R+
Sbjct: 330 TVEHTIEILKGLRDRYEAHHRVSITDGALVAAATLADRYINDRFLPDKAIDLIDEAGARM 389
Query: 265 RLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKE 324
R+R P + RE ++++ +EK A+ QDFEKA LRD E L AQ + D+ K+
Sbjct: 390 RIRRMTAPPDLREFDEKIADARREKESAIDAQDFEKAARLRDSEKQLVAQRA---DREKQ 446
Query: 325 MSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQ 381
+GD+ VV EVD I ++ WTGIPV K++ +E+ RLL+ME+ LHKR+IGQ
Sbjct: 447 W-----RSGDL-DVVAEVDDEQIAEVLGNWTGIPVFKLTEEETTRLLRMEDELHKRIIGQ 500
Query: 382 DEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLD 441
++AVKA+S+AIRR R GLK+P RP SFIF+GP+GVGK+EL+KALA + FG ++A+I++D
Sbjct: 501 EDAVKAVSKAIRRTRAGLKDPRRPSGSFIFAGPSGVGKTELSKALANFLFGDDDALIQID 560
Query: 442 MSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQI 501
M EF +R T S+L G+PPGYVGY EGGQLTE VRR+P++VVLFDEIEKAH +++N +LQ+
Sbjct: 561 MGEFHDRFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNTLLQV 620
Query: 502 LEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVT 561
LEDGRLTD +GRTVDFKNT+LI TSN+G+S I K +G S+Y R+K V
Sbjct: 621 LEDGRLTDGQGRTVDFKNTVLIFTSNLGTSDISKA---VGLGFSEGAAGSNYERMKQKVH 677
Query: 562 EELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRER 621
+ELK++FRPEFLNR+D++IVF QLT+ ++ E+ D+M+ V +LKTKD+ +++T++ +
Sbjct: 678 DELKKHFRPEFLNRIDDIIVFEQLTQEQIIEMVDLMIGRVGKQLKTKDMAMELTDKAKSL 737
Query: 622 VVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDS 669
+ + G++P GARPLRR I R +ED+++EK+L E+ G+ V VDV++
Sbjct: 738 LAKRGFDPVLGARPLRRTIQREIEDALSEKILFNEVGPGELVTVDVEN 785
>gi|384196661|ref|YP_005582405.1| negative regulator of genetic competence ClpC/MecB [Bifidobacterium
breve ACS-071-V-Sch8b]
gi|333109379|gb|AEF26395.1| negative regulator of genetic competence ClpC/MecB [Bifidobacterium
breve ACS-071-V-Sch8b]
Length = 863
Score = 775 bits (2002), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 383/669 (57%), Positives = 520/669 (77%), Gaps = 8/669 (1%)
Query: 3 GESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRT 62
G+ A GV + + L+++G NLT A EGKLDPV+GR +IERV+ +L RRT
Sbjct: 152 GKGDLANAGGVADKQNKSGSAILDQFGRNLTAEAAEGKLDPVIGRTNEIERVMVVLSRRT 211
Query: 63 KNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEER 122
KNNP LIGEPGVGKTA+ EGLAQ+I +GDVP+T++GK+V +LD+G +VAG++YRG+FEER
Sbjct: 212 KNNPVLIGEPGVGKTAVVEGLAQKIQAGDVPETLKGKQVYSLDLGSMVAGSRYRGDFEER 271
Query: 123 LKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEY 182
LKK+++EIK +I+LFIDE+HT++GAG+A+GA+ A+++LKP LARGELQ IGATT DEY
Sbjct: 272 LKKVLKEIKTRGDIVLFIDEIHTIVGAGSADGALGASDMLKPMLARGELQTIGATTTDEY 331
Query: 183 RKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQ 242
RK+IEKD ALERRFQP++V EP++ ETI+ILKGLR RYE HH + TD AL SAA+LS +
Sbjct: 332 RKYIEKDAALERRFQPIQVHEPTIAETIEILKGLRSRYENHHHVTITDGALQSAAELSSR 391
Query: 243 YISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAG 302
YI DR LPDKAIDLIDEAG+R+R++ P E +EL+ ++ +I +K+EA++GQDFEKA
Sbjct: 392 YIQDRNLPDKAIDLIDEAGARLRIKRLTAPPELKELDDKIAKIAADKDEAIKGQDFEKAA 451
Query: 303 ELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTD 362
ELRD + L+A+ K KE S E E+ DV VV E I ++S+ TGIPV K++
Sbjct: 452 ELRDNQEKLEAE-----RKAKEDSWREGES-DVKMVVDEDVIAEVISSTTGIPVFKLTQA 505
Query: 363 ESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSEL 422
ES +LL ME LHKR+IGQDEAV A+SR+IRR RVGLK+P RP SFIF+GPTGVGK+EL
Sbjct: 506 ESKKLLNMEAELHKRIIGQDEAVSALSRSIRRTRVGLKDPKRPSGSFIFAGPTGVGKTEL 565
Query: 423 AKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVV 482
AK LA + F E+A+IR+DMSEF E++ S+L G+PPGYVGY EGG+LTE VRR+P++VV
Sbjct: 566 AKTLAEFLFDDEDALIRVDMSEFSEKYAASRLFGAPPGYVGYEEGGELTEKVRRKPFSVV 625
Query: 483 LFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGF 542
LFDEIEKAHPD+FN +LQ+L+DG LTD +GR VDFKNT++I+T+N+G+ I K GF
Sbjct: 626 LFDEIEKAHPDIFNTLLQVLDDGHLTDGQGRKVDFKNTIIILTTNLGTRDIAKAA-NTGF 684
Query: 543 DLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVF 602
+L + +SSY R+K V+ ELKQ FRPEFLNRLD++IVF+QLT+ +V++I D+ +K++
Sbjct: 685 NLGAN-SESSYQRMKDQVSSELKQQFRPEFLNRLDDIIVFKQLTEPQVRQIVDLDVKQLN 743
Query: 603 DRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDS 662
DRL + + L++T+ ++ + ++G++P GARPLRR I R +ED+++EK+L ++++G
Sbjct: 744 DRLFDRHMSLELTDAAKDLLAQKGFDPLLGARPLRRVIQRDIEDAISEKILMGDLEDGQK 803
Query: 663 VIVDVDSDG 671
VIVD + +G
Sbjct: 804 VIVDAEGEG 812
>gi|169627650|ref|YP_001701299.1| ATP-dependent Clp protease ATP-binding subunit [Mycobacterium
abscessus ATCC 19977]
gi|420862333|ref|ZP_15325729.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 4S-0303]
gi|420866918|ref|ZP_15330305.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 4S-0726-RA]
gi|420876221|ref|ZP_15339597.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 4S-0726-RB]
gi|420913205|ref|ZP_15376517.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 6G-0125-R]
gi|420919524|ref|ZP_15382823.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 6G-0728-S]
gi|420925292|ref|ZP_15388581.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 6G-1108]
gi|420964834|ref|ZP_15428051.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 3A-0810-R]
gi|420975640|ref|ZP_15438826.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 6G-0212]
gi|420981019|ref|ZP_15444192.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 6G-0728-R]
gi|421005578|ref|ZP_15468696.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 3A-0119-R]
gi|421011064|ref|ZP_15474163.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 3A-0122-R]
gi|421016167|ref|ZP_15479237.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 3A-0122-S]
gi|421021609|ref|ZP_15484661.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 3A-0731]
gi|421027390|ref|ZP_15490429.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 3A-0930-R]
gi|421039150|ref|ZP_15502161.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 4S-0116-R]
gi|421046568|ref|ZP_15509568.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 4S-0116-S]
gi|169239617|emb|CAM60645.1| Probable ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus]
gi|392067696|gb|EIT93544.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 4S-0726-RB]
gi|392075249|gb|EIU01083.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 4S-0726-RA]
gi|392077494|gb|EIU03325.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 4S-0303]
gi|392115199|gb|EIU40968.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 6G-0125-R]
gi|392135367|gb|EIU61107.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 6G-0728-S]
gi|392140949|gb|EIU66675.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 6G-1108]
gi|392173585|gb|EIU99252.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 6G-0212]
gi|392176817|gb|EIV02475.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 6G-0728-R]
gi|392204370|gb|EIV29958.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 3A-0119-R]
gi|392213495|gb|EIV39051.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 3A-0122-R]
gi|392217460|gb|EIV42996.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 3A-0122-S]
gi|392217638|gb|EIV43172.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 3A-0731]
gi|392227364|gb|EIV52878.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 4S-0116-R]
gi|392233350|gb|EIV58849.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 3A-0930-R]
gi|392236021|gb|EIV61519.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 4S-0116-S]
gi|392258368|gb|EIV83814.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 3A-0810-R]
Length = 844
Score = 775 bits (2002), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/648 (58%), Positives = 509/648 (78%), Gaps = 15/648 (2%)
Query: 25 LEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLA 84
L+++G NLT A EGKLDPV+GR+ +IERV+Q+L RRTKNNP LIGEPGVGKTA+ EGLA
Sbjct: 171 LDQFGRNLTAAAMEGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLA 230
Query: 85 QRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVH 144
Q I G+VP+T++ K++ TLD+G LVAG++YRG+FEERLKK+++EI +IILFIDE+H
Sbjct: 231 QAIVHGEVPETLKNKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDELH 290
Query: 145 TLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEP 204
TL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEYRK+IEKD ALERRFQPV+V EP
Sbjct: 291 TLVGAGAAEGAIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEP 350
Query: 205 SVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRV 264
+V+ TI+ILKGLR+RYE HH++ TD ALV+AA L+ +YI+DRFLPDKAIDLIDEAG+R+
Sbjct: 351 TVEHTIEILKGLRDRYEAHHRVSITDGALVAAATLADRYINDRFLPDKAIDLIDEAGARM 410
Query: 265 RLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKE 324
R+R P + RE ++++ +EK A+ QDFEKA LRD E L AQ + D+ K+
Sbjct: 411 RIRRMTAPPDLREFDEKIADARREKESAIDAQDFEKAARLRDSEKQLVAQRA---DREKQ 467
Query: 325 MSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQ 381
+GD+ VV EVD I ++ WTGIPV K++ +E+ RLL+ME+ LHKR+IGQ
Sbjct: 468 W-----RSGDL-DVVAEVDDEQIAEVLGNWTGIPVFKLTEEETTRLLRMEDELHKRIIGQ 521
Query: 382 DEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLD 441
++AVKA+S+AIRR R GLK+P RP SFIF+GP+GVGK+EL+KALA + FG ++A+I++D
Sbjct: 522 EDAVKAVSKAIRRTRAGLKDPRRPSGSFIFAGPSGVGKTELSKALANFLFGDDDALIQID 581
Query: 442 MSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQI 501
M EF +R T S+L G+PPGYVGY EGGQLTE VRR+P++VVLFDEIEKAH +++N +LQ+
Sbjct: 582 MGEFHDRFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNTLLQV 641
Query: 502 LEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVT 561
LEDGRLTD +GRTVDFKNT+LI TSN+G+S I K +G S+Y R+K V
Sbjct: 642 LEDGRLTDGQGRTVDFKNTVLIFTSNLGTSDISKA---VGLGFSEGAAGSNYERMKQKVH 698
Query: 562 EELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRER 621
+ELK++FRPEFLNR+D++IVF QLT+ ++ E+ D+M+ V +LKTKD+ +++T++ +
Sbjct: 699 DELKKHFRPEFLNRIDDIIVFEQLTQEQIIEMVDLMIGRVGKQLKTKDMAMELTDKAKSL 758
Query: 622 VVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDS 669
+ + G++P GARPLRR I R +ED+++EK+L E+ G+ V VDV++
Sbjct: 759 LAKRGFDPVLGARPLRRTIQREIEDALSEKILFNEVGPGELVTVDVEN 806
>gi|443294551|ref|ZP_21033645.1| ATP-dependent protease, Hsp 100, part of multi-chaperone system
with DnaK, DnaJ, and GrpE [Micromonospora lupini str.
Lupac 08]
gi|385882023|emb|CCH21911.1| ATP-dependent protease, Hsp 100, part of multi-chaperone system
with DnaK, DnaJ, and GrpE [Micromonospora lupini str.
Lupac 08]
Length = 847
Score = 775 bits (2002), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/650 (59%), Positives = 518/650 (79%), Gaps = 14/650 (2%)
Query: 24 TLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGL 83
L+++G NLT+ A EGKLDPV+GR+ +IERV+Q+L RRTKNNP LIGEPGVGKTA+ EGL
Sbjct: 167 VLDQFGRNLTQAAREGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGL 226
Query: 84 AQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEV 143
+Q+I G+VP+T++ K++ TLD+G LVAG++YRG+FEERLKK+++EI+ +IILFIDE+
Sbjct: 227 SQKIIKGEVPETLKDKQLYTLDLGALVAGSRYRGDFEERLKKVLKEIRTRGDIILFIDEI 286
Query: 144 HTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPE 203
HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEYRKH+EKD ALERRFQP++V E
Sbjct: 287 HTLVGAGAAEGAIDAASILKPMLARGELQTIGATTLDEYRKHLEKDAALERRFQPIQVGE 346
Query: 204 PSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSR 263
PS+ TI+ILKGLR+RYE HH++ TD ALV+AA L+ +YISDRFLPDKAIDLIDEAG+R
Sbjct: 347 PSLAHTIEILKGLRDRYEAHHRVSITDAALVAAATLADRYISDRFLPDKAIDLIDEAGAR 406
Query: 264 VRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGK 323
+R+R P + R+ ++ + Q+ ++K A+ QDFE+A +LRD+E L Q K
Sbjct: 407 MRIRRMTAPPDLRDFDERIAQVRRDKESAIDAQDFERAAQLRDKEKQLLGQ--------K 458
Query: 324 EMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIG 380
+ E +AGD+ VV+EVD I ++ WTGIPV K++ +E+ RLL+ME+ LHKRVIG
Sbjct: 459 AQREKEWKAGDL-DVVSEVDDEQIAEVLGNWTGIPVYKLTEEETSRLLRMEDELHKRVIG 517
Query: 381 QDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRL 440
Q++AVKA+S+AIRR R GLK+P RP SFIF+GP+GVGK+EL+KALA + FGSE+A+I+L
Sbjct: 518 QEDAVKAVSKAIRRTRAGLKDPKRPSGSFIFAGPSGVGKTELSKALAEFLFGSEDALIQL 577
Query: 441 DMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQ 500
DMSEF +R+TVS+L+G+PPGYVGY EGGQLTE VRRRP++VVLFDEIEKAHPDVFN +LQ
Sbjct: 578 DMSEFHDRYTVSRLVGAPPGYVGYDEGGQLTEKVRRRPFSVVLFDEIEKAHPDVFNTLLQ 637
Query: 501 ILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLV 560
ILEDGRLTD +GR VDFKNT++I+T+N+G+ + K +GF D +S+Y+R+K V
Sbjct: 638 ILEDGRLTDGQGRIVDFKNTVIILTTNLGTRDVAK-AVSLGFQQSED-SESNYDRMKQKV 695
Query: 561 TEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRE 620
+ELKQ+FRPEFLNR+D+ IVF QL + E+ I DIM++ + +L KD+ L++T+ ++
Sbjct: 696 NDELKQHFRPEFLNRIDDTIVFHQLRQNEILSIVDIMIRRIETQLHNKDMGLELTDNAKK 755
Query: 621 RVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSD 670
+ ++G++P GARPLRR I R +ED+++E++L E+ G V+VD + D
Sbjct: 756 YLSKKGFDPVLGARPLRRTIQRDIEDNLSERILFNELTPGQIVVVDCEGD 805
>gi|418418717|ref|ZP_12991902.1| ATP-dependent Clp protease ATP-binding subunit [Mycobacterium
abscessus subsp. bolletii BD]
gi|364001890|gb|EHM23082.1| ATP-dependent Clp protease ATP-binding subunit [Mycobacterium
abscessus subsp. bolletii BD]
Length = 823
Score = 775 bits (2002), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/648 (58%), Positives = 509/648 (78%), Gaps = 15/648 (2%)
Query: 25 LEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLA 84
L+++G NLT A EGKLDPV+GR+ +IERV+Q+L RRTKNNP LIGEPGVGKTA+ EGLA
Sbjct: 150 LDQFGRNLTAAAMEGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLA 209
Query: 85 QRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVH 144
Q I G+VP+T++ K++ TLD+G LVAG++YRG+FEERLKK+++EI +IILFIDE+H
Sbjct: 210 QAIVHGEVPETLKNKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDELH 269
Query: 145 TLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEP 204
TL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEYRK+IEKD ALERRFQPV+V EP
Sbjct: 270 TLVGAGAAEGAIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEP 329
Query: 205 SVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRV 264
+V+ TI+ILKGLR+RYE HH++ TD ALV+AA L+ +YI+DRFLPDKAIDLIDEAG+R+
Sbjct: 330 TVEHTIEILKGLRDRYEAHHRVSITDGALVAAATLADRYINDRFLPDKAIDLIDEAGARM 389
Query: 265 RLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKE 324
R+R P + RE ++++ +EK A+ QDFEKA LRD E L AQ + D+ K+
Sbjct: 390 RIRRMTAPPDLREFDEKIADARREKESAIDAQDFEKAARLRDSEKQLVAQRA---DREKQ 446
Query: 325 MSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQ 381
+GD+ VV EVD I ++ WTGIPV K++ +E+ RLL+ME+ LHKR+IGQ
Sbjct: 447 W-----RSGDL-DVVAEVDDEQIAEVLGNWTGIPVFKLTEEETTRLLRMEDELHKRIIGQ 500
Query: 382 DEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLD 441
++AVKA+S+AIRR R GLK+P RP SFIF+GP+GVGK+EL+KALA + FG ++A+I++D
Sbjct: 501 EDAVKAVSKAIRRTRAGLKDPRRPSGSFIFAGPSGVGKTELSKALANFLFGDDDALIQID 560
Query: 442 MSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQI 501
M EF +R T S+L G+PPGYVGY EGGQLTE VRR+P++VVLFDEIEKAH +++N +LQ+
Sbjct: 561 MGEFHDRFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNTLLQV 620
Query: 502 LEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVT 561
LEDGRLTD +GRTVDFKNT+LI TSN+G+S I K +G S+Y R+K V
Sbjct: 621 LEDGRLTDGQGRTVDFKNTVLIFTSNLGTSDISKA---VGLGFSEGAAGSNYERMKQKVH 677
Query: 562 EELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRER 621
+ELK++FRPEFLNR+D++IVF QLT+ ++ E+ D+M+ V +LKTKD+ +++T++ +
Sbjct: 678 DELKKHFRPEFLNRIDDIIVFEQLTQEQIIEMVDLMIGRVGKQLKTKDMAMELTDKAKSL 737
Query: 622 VVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDS 669
+ + G++P GARPLRR I R +ED+++EK+L E+ G+ V VDV++
Sbjct: 738 LAKRGFDPVLGARPLRRTIQREIEDALSEKILFNEVGPGELVTVDVEN 785
>gi|433602206|ref|YP_007034575.1| putative ATP-dependent Clp protease ATP-binding subunit
[Saccharothrix espanaensis DSM 44229]
gi|407880059|emb|CCH27702.1| putative ATP-dependent Clp protease ATP-binding subunit
[Saccharothrix espanaensis DSM 44229]
Length = 856
Score = 775 bits (2002), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 394/700 (56%), Positives = 529/700 (75%), Gaps = 26/700 (3%)
Query: 4 ESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTK 63
E+ E+ G G G SS L+++G NLT A EGKLDPV+GR +IERV+Q+L RRTK
Sbjct: 150 ETAESGGRGEGTPSSS---LVLDQFGRNLTASAREGKLDPVIGRTKEIERVMQVLSRRTK 206
Query: 64 NNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERL 123
NNP LIGEPGVGKTA+ EGLAQ + G+VP+T++ K++ TLD+G LVAG++YRG+FEERL
Sbjct: 207 NNPVLIGEPGVGKTAVVEGLAQMVVKGEVPETLKDKQLYTLDLGSLVAGSRYRGDFEERL 266
Query: 124 KKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYR 183
KK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEYR
Sbjct: 267 KKVLKEIRTRGDIILFIDEIHTLVGAGAAEGAIDAASILKPMLARGELQTIGATTLDEYR 326
Query: 184 KHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQY 243
K++EKDPALERRFQP++V EPS++ TI+ILKGLR+RYE HH++ TD ALV+AA L+ +Y
Sbjct: 327 KYVEKDPALERRFQPIQVGEPSLEHTIEILKGLRDRYEAHHRVSITDSALVAAATLADRY 386
Query: 244 ISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGE 303
I+DRFLPDKAIDLIDEAG+R+R+R P + RE ++++ + +EK A+ QDFE+A +
Sbjct: 387 INDRFLPDKAIDLIDEAGARMRIRRMTAPPDLREFDEKIADVRREKESAIDAQDFERAAK 446
Query: 304 LRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKVS 360
LRD E L Q K + + + GD+ VV EVD I +++ WTGIPV K++
Sbjct: 447 LRDSEKQLLGQ--------KAEREKQWKDGDL-DVVAEVDDEQIAEVLANWTGIPVFKLT 497
Query: 361 TDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 420
+E+ RLL+ME+ LHKR+IGQ +AVKA+S+AIRR R GLK+P RP SFIF+GP+GVGK+
Sbjct: 498 EEETTRLLRMEDELHKRIIGQVDAVKAVSQAIRRTRAGLKDPKRPSGSFIFAGPSGVGKT 557
Query: 421 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 480
EL+KALA + FG ++A+I++DM EF +R+T S+L G+PPGYVGY EGGQLTE VRR+P++
Sbjct: 558 ELSKALAQFLFGEDDALIQIDMGEFHDRYTASRLFGAPPGYVGYEEGGQLTEKVRRKPFS 617
Query: 481 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI 540
VVLFDEIEKAH +V+N +LQ+LEDGRLTD +GRTVDFKNT++I TSN+G+S I K +
Sbjct: 618 VVLFDEIEKAHQEVYNTLLQVLEDGRLTDGQGRTVDFKNTVIIFTSNLGTSDISK-AVGL 676
Query: 541 GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 600
GF D S+Y R+K+ V +ELK++FRPEFLNR+D++IVF QLT+ E+ ++ D+M+
Sbjct: 677 GFTSGQDTA-SNYERMKNKVNDELKKHFRPEFLNRIDDIIVFHQLTQDEIIKMVDLMIAR 735
Query: 601 VFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEG 660
V +LK KD+ +++T+R + + + G++P GARPLRR I R +ED ++EK+L EI+ G
Sbjct: 736 VETQLKNKDMAIELTDRAKMLLAKRGFDPVLGARPLRRTIQREIEDQLSEKILFGEIQPG 795
Query: 661 DSVIVDVDS--------DGNVTVLNGSSGAPESLADPLPV 692
+I DV+ D V G S P S+ D PV
Sbjct: 796 QIIITDVEGWDGESEADDKAHFVFRGES-KPLSVPDAPPV 834
>gi|451339451|ref|ZP_21909968.1| ATP-dependent Clp protease [Amycolatopsis azurea DSM 43854]
gi|449417946|gb|EMD23570.1| ATP-dependent Clp protease [Amycolatopsis azurea DSM 43854]
Length = 852
Score = 775 bits (2002), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/697 (55%), Positives = 525/697 (75%), Gaps = 18/697 (2%)
Query: 4 ESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTK 63
ESTE G+G G G+ + + L+++G NLT A EGKLDPV+GR +IERV+Q+L RRTK
Sbjct: 150 ESTE-TGSGRGEGTPSSSL-VLDQFGRNLTVQAREGKLDPVIGRGKEIERVMQVLSRRTK 207
Query: 64 NNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERL 123
NNP LIGEPGVGKTA+ EGLAQ I G+VP+T++ K++ TLD+G LVAG++YRG+FEERL
Sbjct: 208 NNPVLIGEPGVGKTAVVEGLAQNIVKGEVPETLKDKQLYTLDLGSLVAGSRYRGDFEERL 267
Query: 124 KKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYR 183
KK+++EIK +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTL+EYR
Sbjct: 268 KKVLKEIKTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIGATTLEEYR 327
Query: 184 KHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQY 243
K+IEKD ALERRFQP++V EPS++ TI+ILKGLR+RYE HH++ TD ALV AA L+ +Y
Sbjct: 328 KYIEKDAALERRFQPIQVGEPSLEHTIEILKGLRDRYEAHHRVSITDGALVQAATLADRY 387
Query: 244 ISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGE 303
I+DRFLPDKAIDLIDEAG+R+R+R P + RE ++++ + ++K A+ QDFE+A
Sbjct: 388 INDRFLPDKAIDLIDEAGARMRIRRMTAPPDLREFDEKIADVRRDKESAIDAQDFERAAR 447
Query: 304 LRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDE 363
LRD E L Q KG+ + + DV V E I +++ WTGIPV K++ +E
Sbjct: 448 LRDEEKTLLGQ------KGEREKQWKDGDLDVVAEVDEEQIAEVLANWTGIPVFKLTEEE 501
Query: 364 SDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELA 423
+ RLL+ME+ LHKR+IGQ++AVKA+S+AIRR R GLK+P RP SFIF+GP+GVGK+EL+
Sbjct: 502 TTRLLRMEDELHKRIIGQEDAVKAVSQAIRRTRAGLKDPKRPSGSFIFAGPSGVGKTELS 561
Query: 424 KALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVL 483
KALAA+ FG ++A+I++DM EF +R+T S+L G+PPGYVGY EGGQLTE VRR+P++VVL
Sbjct: 562 KALAAFLFGEDDALIQIDMGEFHDRYTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVVL 621
Query: 484 FDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFD 543
FDEIEKAH +++N +LQ+LEDGRLTD +GRTVDFKNT+LI TSN+G+S I K +GF
Sbjct: 622 FDEIEKAHQEIYNTLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGTSDISK-SVSLGFS 680
Query: 544 LDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFD 603
D + Y ++K V EE+K++FRPEFLNR+D++IVF QLTK ++ E+ D+M+ V
Sbjct: 681 SGGDSTN-RYEKMKQKVNEEMKKHFRPEFLNRIDDIIVFHQLTKEQIIEMVDLMIARVET 739
Query: 604 RLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSV 663
+LK KD+EL++T + + + + G++P GARPLRR I R +ED ++EK+L E++ G +
Sbjct: 740 QLKAKDMELELTPKAKSLLAKRGFDPVLGARPLRRTIQREIEDQLSEKILFGEVQAGQII 799
Query: 664 IVDVDS--------DGNVTVLNGSSGAPESLADPLPV 692
+VDV+ D + P S+ D PV
Sbjct: 800 LVDVEGWNDEEGEKDDKAHFVFRGEARPSSVPDAPPV 836
>gi|156741993|ref|YP_001432122.1| ATPase [Roseiflexus castenholzii DSM 13941]
gi|156233321|gb|ABU58104.1| ATPase AAA-2 domain protein [Roseiflexus castenholzii DSM 13941]
Length = 847
Score = 775 bits (2002), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/660 (58%), Positives = 499/660 (75%), Gaps = 21/660 (3%)
Query: 21 KMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIA 80
K P L+ GT+LT++AE G+LDPV+GRQ +IERV+QIL RRTKNNP LIGEPGVGKTAI
Sbjct: 173 KTPYLDALGTDLTEMAEAGRLDPVIGRQHEIERVIQILSRRTKNNPALIGEPGVGKTAIV 232
Query: 81 EGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFI 140
EGLAQRI +G+VPD+I+GK+V+TLDMG LVAGTKYRG+FEERLK++++EIK++ ILFI
Sbjct: 233 EGLAQRIVAGEVPDSIKGKRVVTLDMGALVAGTKYRGQFEERLKRVVDEIKET-RCILFI 291
Query: 141 DEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVK 200
DE HT+IGAG AEG +DAANILKP+L+RGELQ IGATTLDEYRK+IE+D ALERRFQPV
Sbjct: 292 DEFHTIIGAGGAEGTLDAANILKPALSRGELQTIGATTLDEYRKYIERDAALERRFQPVM 351
Query: 201 VPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEA 260
V +P+ +ETI+IL+G++ RYE H+L+ +DEA+ +AA LS +Y+ DRFLPDKAIDLIDEA
Sbjct: 352 VEQPTEEETIEILRGIKSRYEDFHQLQISDEAIKAAAHLSARYVPDRFLPDKAIDLIDEA 411
Query: 261 GSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVD 320
+RVR+ + P R+ + L I KE+ A+ + FE A +LR+RE + A+I
Sbjct: 412 AARVRMTRSATPPSLRDALRGLEAIRKEREAAIEDEQFELAADLREREERMMARIQ---- 467
Query: 321 KGKEMSKAETEAGDVG--------PVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEE 372
K E E G +G P VTE DI +V WTGIPV+++ DE+ RLL+MEE
Sbjct: 468 ------KIEAELG-IGSDAHLMERPYVTEEDIAEVVGMWTGIPVKRLKGDETTRLLQMEE 520
Query: 373 TLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFG 432
LH R++GQ EA+ I++A+RRAR GLK+P RPI SFIF GPTGVGK+ELAKALA + FG
Sbjct: 521 YLHSRIVGQHEAIVTIAKAVRRARAGLKDPKRPIGSFIFCGPTGVGKTELAKALAEFMFG 580
Query: 433 SEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHP 492
SEE +I++DMSEF ERHT S+L+GSPPGYVGY EGGQLT+AVRR+PY+VVLFDEIEKAHP
Sbjct: 581 SEEHLIKIDMSEFQERHTTSRLVGSPPGYVGYGEGGQLTDAVRRKPYSVVLFDEIEKAHP 640
Query: 493 DVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSS 552
D FN++LQ+LEDG LTD KGR VDF+NT++IMTSNVG+ I + RIGF +
Sbjct: 641 DAFNLLLQVLEDGHLTDGKGRRVDFRNTIIIMTSNVGTEHIRRAS-RIGFSGYSAGSELD 699
Query: 553 YNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIEL 612
I+ V + LKQ FRPEFLNR+D I+F LT E+++I +MLK V ++LK ++ L
Sbjct: 700 NEDIRKKVDDALKQLFRPEFLNRIDATIIFHALTNEEIRQITRLMLKRVQEQLKEHNLTL 759
Query: 613 QVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGN 672
++T+ + + + GY+P+YGARPLRR I L+ED ++E +L + GD V+VDV + N
Sbjct: 760 EITDEACDLLAKRGYDPAYGARPLRRIITNLIEDPLSEGVLEGRFRSGDKVLVDVATLDN 819
>gi|416998781|ref|ZP_11939450.1| negative regulator of genetic competence ClpC/MecB [Veillonella
parvula ACS-068-V-Sch12]
gi|333976934|gb|EGL77793.1| negative regulator of genetic competence ClpC/MecB [Veillonella
parvula ACS-068-V-Sch12]
Length = 815
Score = 775 bits (2001), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/683 (55%), Positives = 519/683 (75%), Gaps = 15/683 (2%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
++G + + G G +S N + L ++ T+L + A++GK+DPV+GR +I+RV+QIL R
Sbjct: 140 ILGSNKGSNNGGQEGINSNNDLGELSDFATDLNESAKQGKIDPVIGRDTEIQRVIQILSR 199
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNP LIGEPGVGKTAIAEGLAQRI + +VP+ + K++I+L +G ++AG KYRGEFE
Sbjct: 200 RTKNNPVLIGEPGVGKTAIAEGLAQRIVTDNVPEILRNKRIISLSIGSMLAGAKYRGEFE 259
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
ERLKK ++E++Q D++I+FIDE+HTL+GAGA EGA+DAANILKP+LARGE Q IGATTLD
Sbjct: 260 ERLKKAIDEVQQHDDMIIFIDEIHTLVGAGATEGAMDAANILKPALARGEFQVIGATTLD 319
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EY+K+IEKD ALERRFQPV+V EP+ ++ ++ILKGLR+RYE HK + TDEAL +A LS
Sbjct: 320 EYKKYIEKDAALERRFQPVQVGEPNEEDALEILKGLRDRYEAFHKAKITDEALTAAVSLS 379
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
+YI+DRFLPDKAID++DEA S+VR++ + + LE L + KEK AV QDFEK
Sbjct: 380 SRYITDRFLPDKAIDVVDEAASKVRMKVFSSAPDVKALEDRLNTVKKEKEAAVTSQDFEK 439
Query: 301 AGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVS 360
A +LRD E L +I DK K ++K E D +VTE DI +V+ WTGIPV K++
Sbjct: 440 AAKLRDEEQLLLKEIG---DK-KSIAK---EKSDQKLIVTEEDIAAVVAQWTGIPVAKIA 492
Query: 361 TDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 420
+ES LL +EE LHKRV+GQDEAV A+++A+RRAR GLK+P RPI SF+F GPTGVGK+
Sbjct: 493 EEESATLLHLEEELHKRVVGQDEAVTAVAKAVRRARAGLKDPKRPIGSFLFLGPTGVGKT 552
Query: 421 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 480
ELA+ALA+ FG E AMIRLDMSE+ME+HTVS+L+G+PPGYVGY EGGQLT+AVRR+PY+
Sbjct: 553 ELARALASSLFGDESAMIRLDMSEYMEKHTVSRLVGAPPGYVGYEEGGQLTDAVRRKPYS 612
Query: 481 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI 540
V+L DE+EKAH D FN++LQ+L+DGRLTDS+GRTVDF+NT++IMTSN+G+ + K +
Sbjct: 613 VILLDEVEKAHADFFNILLQVLDDGRLTDSQGRTVDFRNTVIIMTSNLGAKALHKNSPEL 672
Query: 541 GF------DLDYDE-KDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEI 593
GF D + DE K+ + K V + +K++FRPEFLNR+DEMIVF LT+ ++KEI
Sbjct: 673 GFLAAKKSDFNVDENKEIEFKEAKKSVMDAVKRHFRPEFLNRIDEMIVFHPLTEEDLKEI 732
Query: 594 ADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKML 653
I++ +V RL+ +D++L+++ +V+EG + + GARPL+RAI RL+ED +++ +L
Sbjct: 733 VTILMSDVTKRLEARDLQLEISPEAMHLLVKEGSDFTMGARPLKRAIQRLIEDPVSDLIL 792
Query: 654 AREIKEGDSVIVDV-DSDGNVTV 675
+ KEG + D D+D V++
Sbjct: 793 KGDAKEGKIIKADAKDNDLVVSI 815
>gi|220911112|ref|YP_002486421.1| ATPase AAA [Arthrobacter chlorophenolicus A6]
gi|219857990|gb|ACL38332.1| ATPase AAA-2 domain protein [Arthrobacter chlorophenolicus A6]
Length = 830
Score = 775 bits (2001), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/696 (57%), Positives = 522/696 (75%), Gaps = 17/696 (2%)
Query: 4 ESTEAVGAGVGGGS---SGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
+ E GAGVGGG + L+++G NLT+ A E KLDPV+GR+ ++ERV+Q+L R
Sbjct: 146 QGKETTGAGVGGGQPEGAPAGSVVLDQFGRNLTQAARENKLDPVIGREQEMERVMQVLSR 205
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNP LIGEPGVGKTA+ EGLAQ I GDVP+TI+ K++ TLD+G LVAG++YRG+FE
Sbjct: 206 RTKNNPVLIGEPGVGKTAVVEGLAQAIVRGDVPETIKDKQLYTLDLGSLVAGSRYRGDFE 265
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
ERLKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLD
Sbjct: 266 ERLKKVLKEIRTRGDIILFIDEIHTLVGAGAAEGAIDAASILKPMLARGELQTIGATTLD 325
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRKHIEKD ALERRFQP++V EPSV I+ILKGLR+RYE HH++ TD AL SAA L+
Sbjct: 326 EYRKHIEKDAALERRFQPIQVKEPSVAHAIEILKGLRDRYEAHHRVTITDGALASAASLA 385
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
+YISDRFLPDKAIDLIDEAG+R+R+R P E + +++ + ++ EK A+ QDFE
Sbjct: 386 ERYISDRFLPDKAIDLIDEAGARLRIRRMTAPPELKAMDERIAKLKMEKESAIDAQDFEG 445
Query: 301 AGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVE 357
A LRD+E + IS +K + + ++EVD I +++ TGIPV
Sbjct: 446 AAALRDKEQKM---ISERSEKERHWKSGGMDD------ISEVDEDLIAEVLANSTGIPVF 496
Query: 358 KVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGV 417
K++ +ES RLLKME+ LHKRV+GQDEA+KA+S+AIRR R GLK+P RP SFIF+GPTGV
Sbjct: 497 KLTEEESSRLLKMEDELHKRVVGQDEAIKALSQAIRRTRAGLKDPKRPGGSFIFAGPTGV 556
Query: 418 GKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRR 477
GK+ELAKALA + FG E+A+I LDMSE+ E+HTVS+L G+PPGYVGY EGGQLTE VRRR
Sbjct: 557 GKTELAKALAEFLFGEEDALITLDMSEYSEKHTVSRLFGAPPGYVGYEEGGQLTEKVRRR 616
Query: 478 PYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGG 537
P++VVLFDE+EKAH D+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N+G+ I K
Sbjct: 617 PFSVVLFDEVEKAHADLFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNLGTRDISK-S 675
Query: 538 RRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIM 597
GF D + + YNR+++ VTEELKQ+FRPEFLNR+D+++VF QLT+ E+ EI D+
Sbjct: 676 VATGFQSGTDTQ-TGYNRMRARVTEELKQHFRPEFLNRVDDVVVFPQLTQDEIIEIVDLF 734
Query: 598 LKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREI 657
+ + RLK KD+ +++T + + GY+P+ GARPLRR I R +ED ++EK+L EI
Sbjct: 735 VTRLEKRLKDKDMGIELTSAAKVLLATRGYDPAMGARPLRRTIQREIEDQLSEKILFGEI 794
Query: 658 KEGDSVIVDVDSDGNVTVLNGSSGAPESLADPLPVV 693
GD V+VDV+ +G+ + A + + P V
Sbjct: 795 HPGDIVVVDVEGEGDDAKFTFAGNAKPRIPEIAPSV 830
>gi|384567728|ref|ZP_10014832.1| ATPase with chaperone activity, ATP-binding subunit
[Saccharomonospora glauca K62]
gi|384523582|gb|EIF00778.1| ATPase with chaperone activity, ATP-binding subunit
[Saccharomonospora glauca K62]
Length = 850
Score = 775 bits (2001), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 383/669 (57%), Positives = 519/669 (77%), Gaps = 15/669 (2%)
Query: 3 GESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRT 62
G+ GAG G G+ + + L+++G NLT A EGKLDPV+GR +IERV+Q+L RRT
Sbjct: 147 GKEPAEAGAGRGEGTPSSSL-VLDQFGRNLTASAREGKLDPVIGRSKEIERVMQVLSRRT 205
Query: 63 KNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEER 122
KNNP LIGEPGVGKTA+ EGLAQ I G+VP+T++ K++ TLD+G LVAG++YRG+FEER
Sbjct: 206 KNNPVLIGEPGVGKTAVVEGLAQNIVKGEVPETLKDKQLYTLDLGSLVAGSRYRGDFEER 265
Query: 123 LKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEY 182
LKK+++EIK +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTL+EY
Sbjct: 266 LKKVLKEIKTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIGATTLEEY 325
Query: 183 RKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQ 242
RK+IEKD ALERRFQP++V EPS++ TI+ILKGLR+RYE HH++ TD ALV+AA L+ +
Sbjct: 326 RKYIEKDAALERRFQPIQVGEPSLEHTIEILKGLRDRYEAHHRVSITDSALVAAATLADR 385
Query: 243 YISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAG 302
YI+DR+LPDKAIDLIDEAG+R+R+R P + RE ++++ ++ +EK A+ QDFE+A
Sbjct: 386 YINDRYLPDKAIDLIDEAGARMRIRRMTAPPDLREFDEKIAEVRREKESAIDAQDFERAA 445
Query: 303 ELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKV 359
LRD E L Q S + K+ GD+ VV EVD I +++ WTGIPV K+
Sbjct: 446 RLRDEEKTLLGQKSEREKQWKD--------GDL-DVVAEVDDEQIAEVLANWTGIPVFKL 496
Query: 360 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 419
+ +E+ RLL+MEE LHKR+IGQ++AVKA+S+AIRR R GLK+P RP SFIF+GP+GVGK
Sbjct: 497 TEEETTRLLRMEEELHKRIIGQEDAVKAVSQAIRRTRAGLKDPKRPSGSFIFAGPSGVGK 556
Query: 420 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 479
+EL+KALA + FG ++A+I++DM EF +R+T S+L G+PPGYVGY EGGQLTE VRR+P+
Sbjct: 557 TELSKALANFLFGEDDALIQIDMGEFHDRYTASRLFGAPPGYVGYEEGGQLTEKVRRKPF 616
Query: 480 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 539
+VVLFDEIEKAH +++N +LQ+LEDGRLTD +GRTVDFKNT+LI TSN+G+ I K
Sbjct: 617 SVVLFDEIEKAHQEIYNTLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGTQDISK-SVS 675
Query: 540 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 599
+GF DE Y ++K V EE+K++FRPEFLNR+D++IVF QLT+ ++ ++ D+M+
Sbjct: 676 LGFSSGSDET-GRYEKMKQKVNEEMKKHFRPEFLNRIDDIIVFHQLTQEQIIQMVDLMVS 734
Query: 600 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 659
V ++LK KD+ L++T++ + + + G++P GARPLRR I R +ED ++EK+L E++
Sbjct: 735 RVEEQLKAKDMALELTDKAKALLAKRGFDPVLGARPLRRTIQREIEDQLSEKILFGEVQP 794
Query: 660 GDSVIVDVD 668
G +IVDV+
Sbjct: 795 GQIIIVDVE 803
>gi|379745192|ref|YP_005336013.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium
intracellulare ATCC 13950]
gi|378797556|gb|AFC41692.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium
intracellulare ATCC 13950]
Length = 847
Score = 775 bits (2001), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 379/648 (58%), Positives = 507/648 (78%), Gaps = 15/648 (2%)
Query: 25 LEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLA 84
L+++G NLT A EGKLDPV+GR+ +IERV+Q+L RRTKNNP LIGEPGVGKTA+ EGLA
Sbjct: 171 LDQFGRNLTAAAMEGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLA 230
Query: 85 QRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVH 144
Q I G+VP+T++ K++ TLD+G LVAG++YRG+FEERLKK+++EI +IILFIDE+H
Sbjct: 231 QAIVHGEVPETLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDELH 290
Query: 145 TLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEP 204
TL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEYRK+IEKD ALERRFQPV+V EP
Sbjct: 291 TLVGAGAAEGAIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEP 350
Query: 205 SVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRV 264
+V+ TI+ILKGLR+RYE HH++ TD ALV+AA L+ +YI+DRFLPDKAIDLIDEAG+R+
Sbjct: 351 TVEHTIEILKGLRDRYEAHHRVSITDPALVAAATLADRYINDRFLPDKAIDLIDEAGARM 410
Query: 265 RLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKE 324
R+R P + RE ++++ +EK A+ QDFEKA LRDRE L AQ +
Sbjct: 411 RIRRMTAPPDLREFDEKIADARREKESAIDAQDFEKAASLRDREKQLVAQ--------RA 462
Query: 325 MSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQ 381
+ + +GD+ VV EVD I ++ WTGIPV K++ E+ RLL+ME+ LHKR+IGQ
Sbjct: 463 EREKQWRSGDL-DVVAEVDDEQIAEVLGNWTGIPVFKLTEAETTRLLRMEDELHKRIIGQ 521
Query: 382 DEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLD 441
++AVKA+S+AIRR R GLK+P RP SFIF+GP+GVGK+EL+KALA + FG ++A+I++D
Sbjct: 522 EDAVKAVSKAIRRTRAGLKDPKRPSGSFIFAGPSGVGKTELSKALANFLFGDDDALIQID 581
Query: 442 MSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQI 501
M EF +R T S+L G+PPGYVGY EGGQLTE VRR+P++VVLFDEIEKAH +++N +LQ+
Sbjct: 582 MGEFHDRFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNSLLQV 641
Query: 502 LEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVT 561
LEDGRLTD +GRTVDFKNT+LI TSN+G+S I K +G +++Y R+K V
Sbjct: 642 LEDGRLTDGQGRTVDFKNTVLIFTSNLGTSDISKP---VGLGFTQGGGENNYERMKQKVN 698
Query: 562 EELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRER 621
+ELK++FRPEFLNR+D++IVF QLT+ E+ + D+M++ V ++LK+KD+ +++T++ +
Sbjct: 699 DELKKHFRPEFLNRIDDIIVFHQLTREEIIRMVDLMIQRVGNQLKSKDMAMELTDKAKAL 758
Query: 622 VVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDS 669
+ + G++P GARPLRR I R +ED ++EK+L E+ G V VDVD+
Sbjct: 759 LAKRGFDPVLGARPLRRTIQREIEDQLSEKILFEEVGPGQVVTVDVDN 806
>gi|441216366|ref|ZP_20976990.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium smegmatis MKD8]
gi|440624518|gb|ELQ86380.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium smegmatis MKD8]
Length = 827
Score = 775 bits (2001), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 379/647 (58%), Positives = 507/647 (78%), Gaps = 15/647 (2%)
Query: 25 LEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLA 84
L+++G NLT A EGKLDPV+GR+ +IERV+Q+L RRTKNNP LIGEPGVGKTA+ EGLA
Sbjct: 150 LDQFGRNLTAAAMEGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLA 209
Query: 85 QRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVH 144
Q I G+VP+T++ K++ TLD+G LVAG++YRG+FEERLKK+++EI +IILFIDE+H
Sbjct: 210 QAIVHGEVPETLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDELH 269
Query: 145 TLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEP 204
TL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEYRK+IEKD ALERRFQPV+V EP
Sbjct: 270 TLVGAGAAEGAIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEP 329
Query: 205 SVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRV 264
+V+ TI+ILKGLR+RYE HH++ TD A+V+AA L+ +YI+DRFLPDKAIDLIDEAG+R+
Sbjct: 330 TVEHTIEILKGLRDRYEAHHRVSITDSAMVAAATLADRYINDRFLPDKAIDLIDEAGARM 389
Query: 265 RLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKE 324
R+R P + RE ++++ +EK A+ QDFEKA LRD+E L AQ +
Sbjct: 390 RIRRMTAPPDLREFDEKIADARREKESAIDAQDFEKAAALRDKEKQLVAQ--------RA 441
Query: 325 MSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQ 381
+ + +GD+ VV EVD I ++ WTGIPV K++ +E+ RLL+MEE LHKR+IGQ
Sbjct: 442 EREKQWRSGDL-DVVAEVDDEQIAEVLGNWTGIPVFKLTEEETTRLLRMEEELHKRIIGQ 500
Query: 382 DEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLD 441
++AVKA+S+AIRR R GLK+P RP SFIF+GP+GVGK+EL+KALA + FG ++A+I++D
Sbjct: 501 EDAVKAVSKAIRRTRAGLKDPKRPSGSFIFAGPSGVGKTELSKALANFLFGDDDALIQID 560
Query: 442 MSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQI 501
M EF +R T S+L G+PPGYVGY EGGQLTE VRR+P++VVLFDEIEKAH +++N +LQ+
Sbjct: 561 MGEFHDRFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNSLLQV 620
Query: 502 LEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVT 561
LEDGRLTD +GRTVDFKNT+LI TSN+G+S I K +G +++Y R+K V
Sbjct: 621 LEDGRLTDGQGRTVDFKNTVLIFTSNLGTSDISKA---VGLGFSQGGSENNYERMKQKVH 677
Query: 562 EELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRER 621
+ELK++FRPEFLNR+D++IVF QLT+ E+ ++ D+M+ V ++LKTKD+ +++T++ +
Sbjct: 678 DELKKHFRPEFLNRIDDVIVFHQLTQDEIIQMVDLMIGRVSNQLKTKDMAMELTDKAKAL 737
Query: 622 VVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVD 668
+ + G++P GARPLRR I R +ED ++EK+L EI G V VDV+
Sbjct: 738 LAKRGFDPVLGARPLRRTIQREIEDQLSEKILFEEIGPGQLVTVDVE 784
>gi|254823225|ref|ZP_05228226.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium
intracellulare ATCC 13950]
Length = 847
Score = 775 bits (2000), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 379/648 (58%), Positives = 507/648 (78%), Gaps = 15/648 (2%)
Query: 25 LEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLA 84
L+++G NLT A EGKLDPV+GR+ +IERV+Q+L RRTKNNP LIGEPGVGKTA+ EGLA
Sbjct: 171 LDQFGRNLTAAAMEGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLA 230
Query: 85 QRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVH 144
Q I G+VP+T++ K++ TLD+G LVAG++YRG+FEERLKK+++EI +IILFIDE+H
Sbjct: 231 QAIVHGEVPETLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDELH 290
Query: 145 TLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEP 204
TL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEYRK+IEKD ALERRFQPV+V EP
Sbjct: 291 TLVGAGAAEGAIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEP 350
Query: 205 SVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRV 264
+V+ TI+ILKGLR+RYE HH++ TD ALV+AA L+ +YI+DRFLPDKAIDLIDEAG+R+
Sbjct: 351 TVEHTIEILKGLRDRYEAHHRVSITDPALVAAATLADRYINDRFLPDKAIDLIDEAGARM 410
Query: 265 RLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKE 324
R+R P + RE ++++ +EK A+ QDFEKA LRDRE L AQ +
Sbjct: 411 RIRRMTAPPDLREFDEKIADARREKESAIDAQDFEKAASLRDREKQLVAQ--------RA 462
Query: 325 MSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQ 381
+ + +GD+ VV EVD I ++ WTGIPV K++ E+ RLL+ME+ LHKR+IGQ
Sbjct: 463 EREKQWRSGDL-DVVAEVDDEQIAEVLGNWTGIPVFKLTEAETTRLLRMEDELHKRIIGQ 521
Query: 382 DEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLD 441
++AVKA+S+AIRR R GLK+P RP SFIF+GP+GVGK+EL+KALA + FG ++A+I++D
Sbjct: 522 EDAVKAVSKAIRRTRAGLKDPKRPSGSFIFAGPSGVGKTELSKALANFLFGDDDALIQID 581
Query: 442 MSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQI 501
M EF +R T S+L G+PPGYVGY EGGQLTE VRR+P++VVLFDEIEKAH +++N +LQ+
Sbjct: 582 MGEFHDRFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNSLLQV 641
Query: 502 LEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVT 561
LEDGRLTD +GRTVDFKNT+LI TSN+G+S I K +G +++Y R+K V
Sbjct: 642 LEDGRLTDGQGRTVDFKNTVLIFTSNLGTSDISKP---VGLGFTQGGGENNYERMKQKVN 698
Query: 562 EELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRER 621
+ELK++FRPEFLNR+D++IVF QLT+ E+ + D+M++ V ++LK+KD+ +++T++ +
Sbjct: 699 DELKKHFRPEFLNRIDDIIVFHQLTREEIIRMVDLMIQRVGNQLKSKDMAMELTDKAKAL 758
Query: 622 VVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDS 669
+ + G++P GARPLRR I R +ED ++EK+L E+ G V VDVD+
Sbjct: 759 LAKRGFDPVLGARPLRRTIQREIEDQLSEKILFEEVGPGQVVTVDVDN 806
>gi|302527020|ref|ZP_07279362.1| ATP-dependent chaperone ClpB [Streptomyces sp. AA4]
gi|302435915|gb|EFL07731.1| ATP-dependent chaperone ClpB [Streptomyces sp. AA4]
Length = 831
Score = 775 bits (2000), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 383/676 (56%), Positives = 525/676 (77%), Gaps = 16/676 (2%)
Query: 2 VGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRR 61
GE + G+G G G+ + + L+++G N+T LA EGKLDPV+GR +IERV+Q+L RR
Sbjct: 147 TGEKSTESGSGRGEGTPSSSL-VLDQFGRNMTVLAREGKLDPVIGRGKEIERVMQVLSRR 205
Query: 62 TKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEE 121
TKNNP LIGEPGVGKTA+ EGLAQ I G+VP+T++ K++ TLD+G LVAG++YRG+FEE
Sbjct: 206 TKNNPVLIGEPGVGKTAVVEGLAQSIVKGEVPETLKDKQLYTLDLGSLVAGSRYRGDFEE 265
Query: 122 RLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDE 181
RLKK+++EIK +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTL+E
Sbjct: 266 RLKKVLKEIKTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIGATTLEE 325
Query: 182 YRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSY 241
YRK+IEKD ALERRFQP++V EPS++ TI+ILKGLR+RYE HH++ TD ALV+AA L+
Sbjct: 326 YRKYIEKDAALERRFQPIQVGEPSLEHTIEILKGLRDRYEAHHRVSITDSALVAAATLAD 385
Query: 242 QYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKA 301
+YI+DRFLPDKAIDLIDEAG+R+R+R P + RE ++++ + ++K A+ QDFE+A
Sbjct: 386 RYINDRFLPDKAIDLIDEAGARMRIRRMTAPPDLREFDEKIADVRRDKESAIDAQDFERA 445
Query: 302 GELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEK 358
LRD E L Q KG+ + + + GD+ VV EVD I +++ WTGIPV K
Sbjct: 446 ARLRDEEKQLLGQ------KGER--EKQWKDGDL-DVVAEVDDEQIAEVLANWTGIPVFK 496
Query: 359 VSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVG 418
++ +E+ RLL+ME+ LHKR+IGQ++AVKA+S+AIRR R GLK+P RP SFIF+GP+GVG
Sbjct: 497 LTEEETTRLLRMEDELHKRIIGQEDAVKAVSQAIRRTRAGLKDPKRPSGSFIFAGPSGVG 556
Query: 419 KSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRP 478
K+EL+KALA++ FG ++A+I++DM EF +R+T S+L G+PPGYVGY EGGQLTE VRR+P
Sbjct: 557 KTELSKALASFLFGEDDALIQIDMGEFHDRYTASRLFGAPPGYVGYEEGGQLTEKVRRKP 616
Query: 479 YTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR 538
++VVLFDEIEKAH +++N +LQ+LEDGRLTD +GRTVDFKNT+LI TSN+G+S I K
Sbjct: 617 FSVVLFDEIEKAHQEIYNTLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGTSDISK-SV 675
Query: 539 RIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIML 598
+GF D + Y ++K V EE+K++FRPEFLNR+D++IVF QL + ++ ++ D+M+
Sbjct: 676 SLGFSSGADSTN-RYEKMKQKVNEEMKKHFRPEFLNRIDDIIVFHQLNQEQIIQMVDLMI 734
Query: 599 KEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIK 658
V +LK KD+E+++TE+ + + + G++P GARPLRR I R +ED ++EK+L E++
Sbjct: 735 GRVETQLKAKDMEIELTEKAKALLAKRGFDPVLGARPLRRTIQREIEDQLSEKILFGEVE 794
Query: 659 EGDSVIVDVDS-DGNV 673
G ++VDV+ GN
Sbjct: 795 PGQIIVVDVEGWSGNT 810
>gi|300790533|ref|YP_003770824.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Amycolatopsis
mediterranei U32]
gi|384154066|ref|YP_005536882.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Amycolatopsis
mediterranei S699]
gi|399542411|ref|YP_006555073.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Amycolatopsis
mediterranei S699]
gi|299800047|gb|ADJ50422.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Amycolatopsis
mediterranei U32]
gi|340532220|gb|AEK47425.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Amycolatopsis
mediterranei S699]
gi|398323181|gb|AFO82128.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Amycolatopsis
mediterranei S699]
Length = 831
Score = 775 bits (2000), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/688 (56%), Positives = 530/688 (77%), Gaps = 25/688 (3%)
Query: 4 ESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTK 63
ESTE G+G G G+ + + L+++G N+T LA EGKLDPV+GR +IERV+Q+L RRTK
Sbjct: 129 ESTE-TGSGRGEGTPSSSL-VLDQFGRNMTVLAREGKLDPVIGRGKEIERVMQVLSRRTK 186
Query: 64 NNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERL 123
NNP LIGEPGVGKTA+ EGLAQ I G+VP+T++ K++ TLD+G LVAG++YRG+FEERL
Sbjct: 187 NNPVLIGEPGVGKTAVVEGLAQSIVKGEVPETLKDKQLYTLDLGSLVAGSRYRGDFEERL 246
Query: 124 KKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYR 183
KK+++EIK +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTL+EYR
Sbjct: 247 KKVLKEIKTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIGATTLEEYR 306
Query: 184 KHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQY 243
K+IEKD ALERRFQP++V EPS++ TI+ILKGLR+RYE HH++ TD ALV+AA L+ +Y
Sbjct: 307 KYIEKDAALERRFQPIQVGEPSLEHTIEILKGLRDRYEAHHRVSITDSALVAAATLADRY 366
Query: 244 ISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGE 303
I+DRFLPDKAIDLIDEAG+R+R+R P + RE ++++ + ++K A+ QDFE+A
Sbjct: 367 INDRFLPDKAIDLIDEAGARMRIRRMTAPPDLREFDEKIANVRRDKESAIDAQDFERAAR 426
Query: 304 LRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKVS 360
LRD E L Q KG+ + + + GD+ VV EVD I +++ WTGIPV K++
Sbjct: 427 LRDEEKTLLGQ------KGER--EKQWKDGDL-DVVAEVDDEQIAEVLANWTGIPVFKLT 477
Query: 361 TDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 420
+E+ RLL+MEE LHKR+IGQ++AVKA+S+AIRR R GLK+P RP SFIF+GP+GVGK+
Sbjct: 478 EEETTRLLRMEEELHKRIIGQEDAVKAVSQAIRRTRAGLKDPKRPSGSFIFAGPSGVGKT 537
Query: 421 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 480
EL+KALAA+ FG ++A+I++DM EF +R+T S+L G+PPGYVGY EGGQLTE VRR+P++
Sbjct: 538 ELSKALAAFLFGEDDALIQIDMGEFHDRYTASRLFGAPPGYVGYEEGGQLTEKVRRKPFS 597
Query: 481 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI 540
VVLFDEIEKAH +++N +LQ+LEDGRLTD +GRTVDFKNT+LI TSN+G+S I K +
Sbjct: 598 VVLFDEIEKAHQEIYNTLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGTSDISK-SVSL 656
Query: 541 GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 600
GF ++ + Y ++K V EE+K++FRPEFLNR+D++IVF QLT+ ++ + D+M+
Sbjct: 657 GF-AGSNDTGTRYEKMKQKVNEEMKKHFRPEFLNRIDDIIVFHQLTQEQIIMMVDLMIGR 715
Query: 601 VFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEG 660
V +L+ KD+EL++T + + + + G++P GARPLRR I R +ED ++EK+L E++ G
Sbjct: 716 VETQLRAKDMELELTAKAKSLLAKRGFDPVLGARPLRRTIQREIEDQLSEKILFGEVEPG 775
Query: 661 DSVIVDVDSDGNVTVLNGSSGAPESLAD 688
++VDV+ G SG PE D
Sbjct: 776 QIILVDVE---------GWSGNPEDKDD 794
>gi|441522288|ref|ZP_21003937.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Gordonia
sihwensis NBRC 108236]
gi|441458115|dbj|GAC61898.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Gordonia
sihwensis NBRC 108236]
Length = 846
Score = 775 bits (2000), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/679 (58%), Positives = 523/679 (77%), Gaps = 19/679 (2%)
Query: 4 ESTEAVGAGVGGGSSGNKMPT----LEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 59
+ E AG G SS + P+ L+++G NLT A EGKLDPV+GR+ +IERV+Q+L
Sbjct: 146 QGKEPAEAGTGARSSESGTPSTSLVLDQFGRNLTTAASEGKLDPVIGREKEIERVMQVLS 205
Query: 60 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 119
RRTKNNP LIGEPGVGKTA+ EGLAQ I +G+VP+T++ K++ TLD+G LVAG++YRG+F
Sbjct: 206 RRTKNNPVLIGEPGVGKTAVVEGLAQAIVNGNVPETLKDKQLYTLDLGSLVAGSRYRGDF 265
Query: 120 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 179
EERLKK+++EI +IILFIDE+H L+GAGAAEGAIDAA+ILKP LARGELQ IGATTL
Sbjct: 266 EERLKKVLKEINTRGDIILFIDELHQLVGAGAAEGAIDAASILKPKLARGELQTIGATTL 325
Query: 180 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 239
DEYRK+IEKD ALERRFQPV+V EPSV+ TI+ILKGLR+RYE HHK+ TD AL +AA L
Sbjct: 326 DEYRKYIEKDAALERRFQPVQVGEPSVEHTIEILKGLRDRYEQHHKVSITDGALAAAATL 385
Query: 240 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 299
+ +YI+DRFLPDKAIDLIDEAG+R+R+R P + RE + + + KEK A+ QDFE
Sbjct: 386 ADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPDLREFDDRIAEARKEKESAIDAQDFE 445
Query: 300 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPV 356
KA LRD+E L A+ + + + AGD+ VV EV+ I ++ WTGIPV
Sbjct: 446 KAASLRDKEKQLVAE--------RAEREKQWRAGDL-DVVAEVNDEEIAEVLGNWTGIPV 496
Query: 357 EKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTG 416
K++ +E+ RLL+ME+ LHKR+IGQ++AV A+SRAIRR R GLK+P RP SFIF+GP+G
Sbjct: 497 FKLTEEETTRLLRMEDELHKRIIGQEDAVAAVSRAIRRTRAGLKDPKRPSGSFIFAGPSG 556
Query: 417 VGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRR 476
VGK+EL+KALA + FG ++A+I++DM EF +R T S+L G+PPGYVGY EGGQLTE VRR
Sbjct: 557 VGKTELSKALANFLFGEDDALIQIDMGEFHDRFTASRLFGAPPGYVGYDEGGQLTEKVRR 616
Query: 477 RPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKG 536
+P++VVLFDEIEKAHP+++N +LQ+LEDGRLTD +GRTVDFKNT+LI TSN+G+S I K
Sbjct: 617 KPFSVVLFDEIEKAHPEIYNTLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGTSDISK- 675
Query: 537 GRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADI 596
+GF D D + S+Y+R+K V +ELK++FRPEFLNR+D++IVF QLT+ E+ ++ D+
Sbjct: 676 AVGMGFSKD-DGRGSNYDRMKQKVNDELKKHFRPEFLNRIDDIIVFHQLTQDEIIKMVDL 734
Query: 597 MLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLARE 656
M+ V +LK KD++L++TE+ + + + G++P GARPLRR I R +ED ++EK+L E
Sbjct: 735 MIGRVEAQLKNKDMDLELTEKAKNLLAKRGFDPVLGARPLRRTIQREIEDQLSEKILFEE 794
Query: 657 IKEGDSVIVDVDS-DGNVT 674
IK G V++DV+ DG T
Sbjct: 795 IKAGQIVVIDVEGWDGEGT 813
>gi|375139363|ref|YP_005000012.1| chaperone ATPase [Mycobacterium rhodesiae NBB3]
gi|359819984|gb|AEV72797.1| ATPase with chaperone activity, ATP-binding subunit [Mycobacterium
rhodesiae NBB3]
Length = 847
Score = 775 bits (2000), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/648 (58%), Positives = 506/648 (78%), Gaps = 15/648 (2%)
Query: 25 LEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLA 84
L+++G NLT A EGKLDPV+GR+ +IERV+Q+L RRTKNNP LIGEPGVGKTA+ EGLA
Sbjct: 171 LDQFGRNLTAAAMEGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLA 230
Query: 85 QRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVH 144
Q I G+VP+T++ K++ TLD+G LVAG++YRG+FEERLKK+++EI +IILFIDE+H
Sbjct: 231 QAIVHGEVPETLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDELH 290
Query: 145 TLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEP 204
TL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEYRK+IEKD ALERRFQPV+V EP
Sbjct: 291 TLVGAGAAEGAIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEP 350
Query: 205 SVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRV 264
+V+ TI+ILKGLR+RYE HH++ TD A+V+AA L+ +YI+DRFLPDKAIDLIDEAG+R+
Sbjct: 351 TVEHTIEILKGLRDRYEAHHRVSITDPAIVAAATLADRYINDRFLPDKAIDLIDEAGARM 410
Query: 265 RLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKE 324
R+R P + RE ++++ +EK A+ QDFEKA LRD+E L AQ +
Sbjct: 411 RIRRMTAPPDLREFDEKIADARREKESAIDAQDFEKAASLRDKEKQLVAQ--------RA 462
Query: 325 MSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQ 381
+ + +GD+ VV EVD I ++ WTGIPV K++ +E+ RLL+MEE LHKR+IGQ
Sbjct: 463 EREKQWRSGDL-DVVAEVDDEQIAEVLGNWTGIPVFKLTEEETTRLLRMEEELHKRIIGQ 521
Query: 382 DEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLD 441
++AVKA+S+AIRR R GLK+P RP SFIF+GP+GVGK+EL+KALA + FG ++A+I++D
Sbjct: 522 EDAVKAVSKAIRRTRAGLKDPKRPSGSFIFAGPSGVGKTELSKALANFLFGDDDALIQID 581
Query: 442 MSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQI 501
M EF +R T S+L G+PPGYVGY EGGQLTE VRR+P++VVLFDEIEKAH +++N +LQ+
Sbjct: 582 MGEFHDRFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNSLLQV 641
Query: 502 LEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVT 561
LEDGRLTD +GRTVDFKNT+LI TSN+G+S I K +G +++Y R+K V
Sbjct: 642 LEDGRLTDGQGRTVDFKNTVLIFTSNLGTSDISKA---VGLGFTQGGGENNYERMKQKVN 698
Query: 562 EELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRER 621
+ELK++FRPEFLNR+D++IVF QLT+ E+ ++ D+M+ V +LK KD+ +++T++ +
Sbjct: 699 DELKKHFRPEFLNRIDDIIVFHQLTRDEIIQMVDLMIGRVEKQLKAKDMAMELTDKAKSL 758
Query: 622 VVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDS 669
+ + G++P GARPLRR I R +ED ++EK+L E+ G V VDVD+
Sbjct: 759 LAKRGFDPVLGARPLRRTIQREIEDQLSEKILFEEVGPGQLVTVDVDN 806
>gi|433457230|ref|ZP_20415238.1| ATP-dependent Clp protease, ATP-binding subunit [Arthrobacter
crystallopoietes BAB-32]
gi|432195128|gb|ELK51687.1| ATP-dependent Clp protease, ATP-binding subunit [Arthrobacter
crystallopoietes BAB-32]
Length = 812
Score = 775 bits (2000), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/666 (58%), Positives = 521/666 (78%), Gaps = 15/666 (2%)
Query: 25 LEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLA 84
L+++G NLT+ A E KLDPV+GR+ ++ERV+Q+L RRTKNNP LIGEPGVGKTA+ EGLA
Sbjct: 147 LDQFGRNLTQAARESKLDPVIGREHEMERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLA 206
Query: 85 QRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVH 144
Q I GDVP+TI K++ TLD+G LVAG++YRG+FEERLKK+++EI+ +IILFIDE+H
Sbjct: 207 QAIVRGDVPETIRDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEIRTRGDIILFIDEIH 266
Query: 145 TLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEP 204
TL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEYRKHIEKD ALERRFQP++V EP
Sbjct: 267 TLVGAGAAEGAIDAASILKPMLARGELQTIGATTLDEYRKHIEKDAALERRFQPIQVNEP 326
Query: 205 SVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRV 264
SVD +QILKGLR+RYE HH++ TD AL +AA L+++YISDRFLPDKAIDLIDEAG+R+
Sbjct: 327 SVDHAVQILKGLRDRYEAHHRVSITDGALDAAAHLAHRYISDRFLPDKAIDLIDEAGARL 386
Query: 265 RLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKE 324
R+R P E +E+++++ ++ K+K A+ QDFE A LRD+E L+ + +A KE
Sbjct: 387 RIRRMTAPPELKEIDEKIAELKKQKESAIDAQDFEGAASLRDKESKLQNERAA-----KE 441
Query: 325 MSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQ 381
+ ++GD+ + EVD I +++ TGIPV K++ +ES RL+ ME LHKRVIGQ
Sbjct: 442 RA---WKSGDLDE-IAEVDEDLIAEVLANSTGIPVFKLTEEESSRLMHMEAELHKRVIGQ 497
Query: 382 DEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLD 441
DEA+KAIS+AIRR R GLK+PNRP SFIF+GPTGVGK+ELAKALA + FG E+A+I LD
Sbjct: 498 DEAIKAISQAIRRTRAGLKDPNRPSGSFIFAGPTGVGKTELAKALAEFLFGEEDALITLD 557
Query: 442 MSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQI 501
MSE+ E+HTVS+L G+PPGYVGY EGGQLTE VRRRP++VVLFDE+EKAH D+FN +LQI
Sbjct: 558 MSEYSEKHTVSRLFGAPPGYVGYEEGGQLTEKVRRRPFSVVLFDEVEKAHADLFNSLLQI 617
Query: 502 LEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVT 561
LEDGRLTDS+GR VDFKNT++IMT+N+G+ I K G GF D K + Y R+++ V
Sbjct: 618 LEDGRLTDSQGRVVDFKNTVIIMTTNLGTRDISK-GVMTGFQSGTDTK-TGYERMRARVQ 675
Query: 562 EELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRER 621
+ELKQ+FRPEFLNR+D+ +VF QLT+ E+ +I D+ + + RL K++++ +T +
Sbjct: 676 DELKQHFRPEFLNRVDDTVVFPQLTEEEIVQIVDLFVTRLQKRLAEKNMKIDLTPAAKVL 735
Query: 622 VVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVT-VLNGSS 680
+ GY+P+ GARPLRR I R +ED ++EK+L EI+ G+++ VDVD +G+ ++ ++
Sbjct: 736 LANRGYDPTMGARPLRRTIQREVEDQLSEKILFGEIQPGETIHVDVDGEGDAAKLVFTTT 795
Query: 681 GAPESL 686
G P+++
Sbjct: 796 GTPKAI 801
>gi|183985068|ref|YP_001853359.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium
marinum M]
gi|183178394|gb|ACC43504.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium
marinum M]
Length = 848
Score = 774 bits (1999), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 379/648 (58%), Positives = 505/648 (77%), Gaps = 15/648 (2%)
Query: 25 LEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLA 84
L+++G NLT A EGKLDPV+GR+ +IERV+Q+L RRTKNNP LIGEPGVGKTA+ EGLA
Sbjct: 171 LDQFGRNLTAAAMEGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLA 230
Query: 85 QRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVH 144
Q I G+VP+T++ K++ TLD+G LVAG++YRG+FEERLKK+++EI +IILFIDE+H
Sbjct: 231 QAIVHGEVPETLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDELH 290
Query: 145 TLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEP 204
TL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEYRK+IEKD ALERRFQPV+V EP
Sbjct: 291 TLVGAGAAEGAIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEP 350
Query: 205 SVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRV 264
+V+ TI+ILKGLR+RYE HH++ TD A+V+AA L+ +YI+DRFLPDKAIDLIDEAG+R+
Sbjct: 351 TVEHTIEILKGLRDRYEAHHRVSITDSAMVAAATLADRYINDRFLPDKAIDLIDEAGARM 410
Query: 265 RLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKE 324
R+R P + RE ++++ +EK A+ QDFEKA LRDRE L AQ +
Sbjct: 411 RIRRMTAPPDLREFDEKIADARREKESAIDAQDFEKAASLRDREKQLVAQ--------RA 462
Query: 325 MSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQ 381
+ + +GD+ VV EVD I ++ WTGIPV K++ E+ RLL+ME+ LHKR+IGQ
Sbjct: 463 EREKQWRSGDL-DVVAEVDDEQIAEVLGNWTGIPVFKLTEAETTRLLRMEDELHKRIIGQ 521
Query: 382 DEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLD 441
++AVKA+S+AIRR R GLK+P RP SFIF+GP+GVGK+EL+KALA + FG ++A+I++D
Sbjct: 522 EDAVKAVSKAIRRTRAGLKDPKRPSGSFIFAGPSGVGKTELSKALANFLFGDDDALIQID 581
Query: 442 MSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQI 501
M EF +R T S+L G+PPGYVGY EGGQLTE VRR+P++VVLFDEIEKAH +++N +LQ+
Sbjct: 582 MGEFHDRFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNSLLQV 641
Query: 502 LEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVT 561
LEDGRLTD +GRTVDFKNT+LI TSN+G+S I K +G ++ Y R+K V
Sbjct: 642 LEDGRLTDGQGRTVDFKNTVLIFTSNLGTSDISKP---VGLGFSQTGGENDYERMKQKVN 698
Query: 562 EELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRER 621
+ELK++FRPEFLNR+D++IVF QLT+ E+ + D+M+ V ++LK+KD+ L++T++ +
Sbjct: 699 DELKKHFRPEFLNRIDDIIVFHQLTRDEIIRMVDLMIGRVANQLKSKDMALELTDKAKSL 758
Query: 622 VVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDS 669
+ + G++P GARPLRR I R +ED ++EK+L E+ G V VDVD+
Sbjct: 759 LAKRGFDPVLGARPLRRTIQREIEDQLSEKILFEEVGPGQVVTVDVDN 806
>gi|383826095|ref|ZP_09981237.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium
xenopi RIVM700367]
gi|383333857|gb|EID12305.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium
xenopi RIVM700367]
Length = 850
Score = 774 bits (1999), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 379/648 (58%), Positives = 508/648 (78%), Gaps = 15/648 (2%)
Query: 25 LEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLA 84
L+++G NLT A EGKLDPV+GR+ +IERV+Q+L RRTKNNP LIGEPGVGKTA+ EGLA
Sbjct: 171 LDQFGRNLTAAAMEGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLA 230
Query: 85 QRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVH 144
Q+I GDVP+T++ K++ TLD+G LVAG++YRG+FEERLKK+++EI +IILFIDE+H
Sbjct: 231 QKIVHGDVPETLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDELH 290
Query: 145 TLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEP 204
TL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEYRK+IEKD ALERRFQPV+V EP
Sbjct: 291 TLVGAGAAEGAIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEP 350
Query: 205 SVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRV 264
+V+ TI+ILKGLR+RYE HH++ TD A+V+AA L+ +YI+DRFLPDKAIDLIDEAG+R+
Sbjct: 351 TVEHTIEILKGLRDRYEAHHRVSITDGAMVAAATLADRYINDRFLPDKAIDLIDEAGARM 410
Query: 265 RLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKE 324
R+R P + RE ++++ + +EK A+ QDFEKA LRDRE L AQ +
Sbjct: 411 RIRRMTAPPDLREFDEKIAEARREKESAIDAQDFEKAAALRDREKQLVAQ--------RA 462
Query: 325 MSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQ 381
+ + +GD+ VV EVD I ++ WTGIPV K++ E+ RLL+MEE LHKR+IGQ
Sbjct: 463 EREKQWRSGDL-DVVAEVDDEQIAEVLGNWTGIPVFKLTEAETTRLLRMEEELHKRIIGQ 521
Query: 382 DEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLD 441
++AVKA+S+AIRR R GLK+P RP SFIF+GP+GVGK+EL+KALA + FG ++A+I++D
Sbjct: 522 EDAVKAVSKAIRRTRAGLKDPKRPSGSFIFAGPSGVGKTELSKALAEFLFGDDDALIQID 581
Query: 442 MSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQI 501
M EF +R T S+L G+PPGYVGY EGGQLTE VRR+P++VVLFDEIEKAH +++N +LQ+
Sbjct: 582 MGEFHDRFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNSLLQV 641
Query: 502 LEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVT 561
LEDGRLTD +GRTVDFKNT+LI TSN+G++ I K +G +++Y R+K V
Sbjct: 642 LEDGRLTDGQGRTVDFKNTVLIFTSNLGTADISKP---VGLGFSPGGGENNYERMKQKVN 698
Query: 562 EELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRER 621
+ELK++FRPEFLNR+D++IVF QLT+ E+ + ++M+ V +LK+KD+ L++T++ +
Sbjct: 699 DELKKHFRPEFLNRIDDIIVFHQLTQEEIIRMVELMISRVAAQLKSKDMTLELTDKAKAL 758
Query: 622 VVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDS 669
+ + G++P GARPLRR I R +ED+++EK+L E+ G V VDVD+
Sbjct: 759 LAKRGFDPVLGARPLRRTIQREIEDALSEKILFEEVGPGQVVTVDVDN 806
>gi|379752482|ref|YP_005341154.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium
intracellulare MOTT-02]
gi|379759922|ref|YP_005346319.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium
intracellulare MOTT-64]
gi|387873864|ref|YP_006304168.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium sp.
MOTT36Y]
gi|443308784|ref|ZP_21038570.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium sp.
H4Y]
gi|378802698|gb|AFC46833.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium
intracellulare MOTT-02]
gi|378807864|gb|AFC51998.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium
intracellulare MOTT-64]
gi|386787322|gb|AFJ33441.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium sp.
MOTT36Y]
gi|442763900|gb|ELR81899.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium sp.
H4Y]
Length = 847
Score = 774 bits (1999), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 379/648 (58%), Positives = 507/648 (78%), Gaps = 15/648 (2%)
Query: 25 LEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLA 84
L+++G NLT A EGKLDPV+GR+ +IERV+Q+L RRTKNNP LIGEPGVGKTA+ EGLA
Sbjct: 171 LDQFGRNLTAAAMEGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLA 230
Query: 85 QRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVH 144
Q I G+VP+T++ K++ TLD+G LVAG++YRG+FEERLKK+++EI +IILFIDE+H
Sbjct: 231 QAIVHGEVPETLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDELH 290
Query: 145 TLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEP 204
TL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEYRK+IEKD ALERRFQPV+V EP
Sbjct: 291 TLVGAGAAEGAIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEP 350
Query: 205 SVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRV 264
+V+ TI+ILKGLR+RYE HH++ TD ALV+AA L+ +YI+DRFLPDKAIDLIDEAG+R+
Sbjct: 351 TVEHTIEILKGLRDRYEAHHRVSITDPALVAAATLADRYINDRFLPDKAIDLIDEAGARM 410
Query: 265 RLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKE 324
R+R P + RE ++++ +EK A+ QDFEKA LRDRE L AQ +
Sbjct: 411 RIRRMTAPPDLREFDEKIADARREKESAIDAQDFEKAASLRDREKQLVAQ--------RA 462
Query: 325 MSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQ 381
+ + +GD+ VV EVD I ++ WTGIPV K++ E+ RLL+ME+ LHKR+IGQ
Sbjct: 463 EREKQWRSGDL-DVVAEVDDEQIAEVLGNWTGIPVFKLTEAETTRLLRMEDELHKRIIGQ 521
Query: 382 DEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLD 441
++AVKA+S+AIRR R GLK+P RP SFIF+GP+GVGK+EL+KALA + FG ++A+I++D
Sbjct: 522 EDAVKAVSKAIRRTRAGLKDPKRPSGSFIFAGPSGVGKTELSKALANFLFGDDDALIQID 581
Query: 442 MSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQI 501
M EF +R T S+L G+PPGYVGY EGGQLTE VRR+P++VVLFDEIEKAH +++N +LQ+
Sbjct: 582 MGEFHDRFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNSLLQV 641
Query: 502 LEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVT 561
LEDGRLTD +GRTVDFKNT+LI TSN+G+S I K +G +++Y R+K V
Sbjct: 642 LEDGRLTDGQGRTVDFKNTVLIFTSNLGTSDISKP---VGLGFTQGGGENNYERMKQKVN 698
Query: 562 EELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRER 621
+ELK++FRPEFLNR+D++IVF QLT+ E+ + D+M++ V ++LK+KD+ +++T++ +
Sbjct: 699 DELKKHFRPEFLNRIDDIIVFHQLTRDEIIRMVDLMIQRVGNQLKSKDMAMELTDKAKAL 758
Query: 622 VVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDS 669
+ + G++P GARPLRR I R +ED ++EK+L E+ G V VDVD+
Sbjct: 759 LAKRGFDPVLGARPLRRTIQREIEDQLSEKILFEEVGPGQVVTVDVDN 806
>gi|163848025|ref|YP_001636069.1| ATPase [Chloroflexus aurantiacus J-10-fl]
gi|222525912|ref|YP_002570383.1| ATPase AAA-2 domain-containing protein [Chloroflexus sp. Y-400-fl]
gi|163669314|gb|ABY35680.1| ATPase AAA-2 domain protein [Chloroflexus aurantiacus J-10-fl]
gi|222449791|gb|ACM54057.1| ATPase AAA-2 domain protein [Chloroflexus sp. Y-400-fl]
Length = 833
Score = 774 bits (1998), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 384/651 (58%), Positives = 497/651 (76%), Gaps = 8/651 (1%)
Query: 20 NKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAI 79
+K P L+ GT+LT++AE+G+LDP++GRQ +IERV+QIL RRTKNNP LIGEPGVGKTAI
Sbjct: 169 SKTPYLDALGTDLTEMAEQGRLDPIIGRQHEIERVIQILSRRTKNNPALIGEPGVGKTAI 228
Query: 80 AEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILF 139
EGLAQRI GDVPD+I+GK+V+TLDMG LVAGTKYRG+FEERLK++++EIK+S ILF
Sbjct: 229 VEGLAQRIVQGDVPDSIKGKRVVTLDMGALVAGTKYRGQFEERLKRVIDEIKES-RCILF 287
Query: 140 IDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPV 199
IDE HT+IGAG AEG +DAANILKP+L+RGELQ IGATTLDEYRK+IE+D ALERRFQPV
Sbjct: 288 IDEFHTIIGAGGAEGTLDAANILKPALSRGELQTIGATTLDEYRKYIERDAALERRFQPV 347
Query: 200 KVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDE 259
V EPS+++TIQIL+G++ RYE H+L+ +DEA+ +AA LS +Y+ DR LPDKAIDLIDE
Sbjct: 348 MVDEPSIEDTIQILRGIKSRYEDFHQLQISDEAIRAAAVLSARYVPDRQLPDKAIDLIDE 407
Query: 260 AGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALV 319
A SRVR+ + P R+ + L + KE+ A+ Q FE A +LR+RE + ++I +
Sbjct: 408 AASRVRMYRSATPPRLRDALRGLEALRKEREAALEDQQFELANDLREREERMLSRIQEIE 467
Query: 320 DKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVI 379
+ S E P VTE DI +V WTG+PV +++ +E+ RL++MEE LH R++
Sbjct: 468 AELGTRSDERYER----PYVTEEDIAEVVGMWTGVPVTRLTGNETQRLMQMEEFLHSRIV 523
Query: 380 GQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIR 439
GQ EA+ IS+A+RRAR GLK+P RPI SFIF GPTGVGK+ELAKALA + FG+EEA+I+
Sbjct: 524 GQHEAIVTISKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELAKALAEFMFGTEEALIK 583
Query: 440 LDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMML 499
+DMSEF ERHT S+L+GSPPGY+GY EGGQLT+AVRR+PY+VVLFDEIEKAHPD FN++L
Sbjct: 584 IDMSEFQERHTTSRLVGSPPGYIGYGEGGQLTDAVRRKPYSVVLFDEIEKAHPDAFNLLL 643
Query: 500 QILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSL 559
Q+LEDG LTD KGR VDF+NT++IMTSNVG+ I + RIGF + E D N ++
Sbjct: 644 QVLEDGHLTDGKGRRVDFRNTIIIMTSNVGTEHIRRAS-RIGFGSNAAEIDQ--NDMRRK 700
Query: 560 VTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFR 619
V E L+ FRPEFLNR+D I+F LT E++ I +MLK V +L I+L+V
Sbjct: 701 VDEALRMLFRPEFLNRIDATIIFHPLTTEEIQSITRLMLKRVQTQLDEHQIKLEVQPDAL 760
Query: 620 ERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSD 670
E + GY+P++GARPLRR I L+ED +AE +L+ + ++GD+VIVD D
Sbjct: 761 EFLARRGYDPAFGARPLRRVITNLIEDPLAEGLLSGQFRDGDTVIVDTFED 811
>gi|379734094|ref|YP_005327599.1| putative ATP-dependent Clp protease ATP-binding subunit
[Blastococcus saxobsidens DD2]
gi|378781900|emb|CCG01552.1| Putative ATP-dependent Clp protease ATP-binding subunit
[Blastococcus saxobsidens DD2]
Length = 842
Score = 774 bits (1998), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 383/663 (57%), Positives = 511/663 (77%), Gaps = 16/663 (2%)
Query: 11 AGVGGGSSGNKMPTL--EEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCL 68
A GG + G +L +++G NLT+ A + KLDPV+GR +IERV+Q+L RRTKNNP L
Sbjct: 151 AAAGGPAEGTPSTSLVLDQFGRNLTQAARDQKLDPVIGRAKEIERVMQVLSRRTKNNPVL 210
Query: 69 IGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLME 128
IGEPGVGKTA EGLAQ I G+VP+T++ K++ TLD+G LVAG++YRG+FEERLKK+++
Sbjct: 211 IGEPGVGKTAAVEGLAQAIVKGEVPETLKDKQLYTLDLGALVAGSRYRGDFEERLKKVLK 270
Query: 129 EIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEK 188
EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEYRKH+EK
Sbjct: 271 EIRTRGDIILFIDEIHTLVGAGAAEGAIDAASILKPMLARGELQTIGATTLDEYRKHLEK 330
Query: 189 DPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRF 248
D ALERRFQP++V EP++ T++ILKGLR+RYE HH++ TD ALV+AA L+ +YISDRF
Sbjct: 331 DAALERRFQPIQVSEPTLAHTVEILKGLRDRYEAHHRISITDSALVAAATLADRYISDRF 390
Query: 249 LPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDRE 308
LPDKAIDLIDEAG+R+R++ P + RE + ++ + +EK A+ QDFEKA LRD E
Sbjct: 391 LPDKAIDLIDEAGARMRIKRMTAPPDLREFDDKIAAVRREKESAIDAQDFEKAASLRDTE 450
Query: 309 MDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKVSTDESD 365
L + K + + +AGD+ VV EVD I +++ WTGIPV K++ +E+
Sbjct: 451 KQLLGE--------KAEREKQWKAGDMD-VVAEVDDEQIAEVLANWTGIPVFKLTEEETS 501
Query: 366 RLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKA 425
RLL+ME+ LHKR+IGQ+EA+K++S+AIRR R GLK+P RP SFIF+GP+GVGK+ELAKA
Sbjct: 502 RLLRMEDELHKRIIGQEEAIKSVSQAIRRTRAGLKDPRRPGGSFIFAGPSGVGKTELAKA 561
Query: 426 LAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFD 485
LA + FG ++A+I++DM EF ++ TVS+L+G+PPGYVGY EGGQLTE VRR+P++VVLFD
Sbjct: 562 LAQFLFGEDDALIQIDMGEFHDKFTVSRLVGAPPGYVGYDEGGQLTEKVRRKPFSVVLFD 621
Query: 486 EIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLD 545
EIEKAH DVFN +LQ+LEDGRLTD +GR VDFKNT+LI+T+N+G+ I K +GF
Sbjct: 622 EIEKAHADVFNTLLQVLEDGRLTDGQGRIVDFKNTILILTTNLGTRDISK-AVGLGFQAG 680
Query: 546 YDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRL 605
D + S+Y R+K V EELKQ+FRPEFLNR+D+++VF QLT+ E+ I D+ML + +L
Sbjct: 681 NDNQ-SNYERMKLKVNEELKQHFRPEFLNRIDDIVVFHQLTEDEIVHIVDLMLARLETQL 739
Query: 606 KTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIV 665
K KD+ ++VT ++ + G++P GARPLRR I R +ED+++EK+L E+ G V+V
Sbjct: 740 KNKDMAIEVTPAAKKLLATRGFDPVLGARPLRRTIQREIEDALSEKILYGELTSGQIVVV 799
Query: 666 DVD 668
DVD
Sbjct: 800 DVD 802
>gi|384201060|ref|YP_005586807.1| Clp protease [Bifidobacterium longum subsp. longum KACC 91563]
gi|338754067|gb|AEI97056.1| Clp protease [Bifidobacterium longum subsp. longum KACC 91563]
Length = 871
Score = 774 bits (1998), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/664 (57%), Positives = 519/664 (78%), Gaps = 8/664 (1%)
Query: 8 AVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPC 67
A GV + + L+++G NLT A EGKLDPV+GR +IERV+ +L RRTKNNP
Sbjct: 158 ANAGGVTDKQNKSGSAILDQFGRNLTAEAAEGKLDPVIGRTNEIERVMVVLSRRTKNNPV 217
Query: 68 LIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLM 127
LIGEPGVGKTA+ EGLAQ+I +GDVP+T++GK+V +LD+G +VAG++YRG+FEERLKK++
Sbjct: 218 LIGEPGVGKTAVVEGLAQKIQAGDVPETLKGKQVYSLDLGSMVAGSRYRGDFEERLKKVL 277
Query: 128 EEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIE 187
+EIK +I+LFIDE+HT++GAG+A+GA+ A+++LKP LARGELQ IGATT DEYRK+IE
Sbjct: 278 KEIKTRGDIVLFIDEIHTIVGAGSADGALGASDMLKPMLARGELQTIGATTTDEYRKYIE 337
Query: 188 KDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDR 247
KD ALERRFQP++V EP++ ETI+ILKGLR RYE HH + TD AL SAA+LS +YI DR
Sbjct: 338 KDAALERRFQPIQVHEPTIAETIEILKGLRSRYENHHHVTITDGALQSAAELSSRYIQDR 397
Query: 248 FLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDR 307
LPDKAIDLIDEAG+R+R++ P E +EL++++ +I +K+EA++GQDFEKA ELRD+
Sbjct: 398 NLPDKAIDLIDEAGARLRIKRLTAPPELKELDEKIAKIAADKDEAIKGQDFEKAAELRDK 457
Query: 308 EMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRL 367
+ L+A K KE S E E+ DV VV E I ++S+ TGIPV K++ ES +L
Sbjct: 458 QEKLEAD-----RKQKEDSWREGES-DVKMVVDEDVIAEVISSTTGIPVFKLTQAESKKL 511
Query: 368 LKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALA 427
L ME LHKR+IGQDEAV A+SR+IRR RVGLK+P RP SFIF+GPTGVGK+ELAK LA
Sbjct: 512 LNMEAELHKRIIGQDEAVSALSRSIRRTRVGLKDPKRPSGSFIFAGPTGVGKTELAKTLA 571
Query: 428 AYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEI 487
+ F E+A+IR+DMSEF E++ S+L G+PPGYVGY EGG+LTE VRR+P++VVLFDEI
Sbjct: 572 EFLFDDEDALIRVDMSEFSEKYAASRLFGAPPGYVGYEEGGELTEKVRRKPFSVVLFDEI 631
Query: 488 EKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYD 547
EKAHPD+FN +LQ+L+DG LTD +GR VDFKNT++I+T+N+G+ I K GF+L +
Sbjct: 632 EKAHPDIFNTLLQVLDDGHLTDGQGRKVDFKNTIIILTTNLGTRDIAKAA-NTGFNLGAN 690
Query: 548 EKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKT 607
+SSY R+K V+ ELKQ FRPEFLNRLD++IVF+QLT+ +V++I D+ +K++ DRL
Sbjct: 691 -NESSYQRMKDQVSSELKQQFRPEFLNRLDDIIVFKQLTEPQVRQIVDLDVKQLNDRLFD 749
Query: 608 KDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDV 667
+ + L++T+ ++ + ++G++P GARPLRR I R +ED+++EK+L ++++G VIVD
Sbjct: 750 RHMSLELTDAAKDLLAQKGFDPLLGARPLRRVIQRDIEDAISEKILMGDLEDGQRVIVDA 809
Query: 668 DSDG 671
+ +G
Sbjct: 810 EGEG 813
>gi|443493153|ref|YP_007371300.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium
liflandii 128FXT]
gi|442585650|gb|AGC64793.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium
liflandii 128FXT]
Length = 848
Score = 774 bits (1998), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/648 (58%), Positives = 505/648 (77%), Gaps = 15/648 (2%)
Query: 25 LEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLA 84
L+++G NLT A EGKLDPV+GR+ +IERV+Q+L RRTKNNP LIGEPGVGKTA+ EGLA
Sbjct: 171 LDQFGRNLTAAAMEGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLA 230
Query: 85 QRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVH 144
Q I G+VP+T++ K++ TLD+G LVAG++YRG+FEERLKK+++EI +IILFIDE+H
Sbjct: 231 QAIVHGEVPETLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDELH 290
Query: 145 TLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEP 204
TL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEYRK+IEKD ALERRFQPV+V EP
Sbjct: 291 TLVGAGAAEGAIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEP 350
Query: 205 SVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRV 264
+V+ TI+ILKGLR+RYE HH++ TD A+V+AA L+ +YI+DRFLPDKAIDLIDEAG+R+
Sbjct: 351 TVEHTIEILKGLRDRYEAHHRVSITDSAMVAAATLADRYINDRFLPDKAIDLIDEAGARI 410
Query: 265 RLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKE 324
R+R P + RE ++++ +EK A+ QDFEKA LRDRE L AQ +
Sbjct: 411 RIRRMTAPPDLREFDEKIADARREKESAIDAQDFEKAASLRDREKQLVAQ--------RA 462
Query: 325 MSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQ 381
+ + +GD+ VV EVD I ++ WTGIPV K++ E+ RLL+ME+ LHKR+IGQ
Sbjct: 463 EREKQWRSGDL-DVVAEVDDEQIAEVLGNWTGIPVFKLTEAETTRLLRMEDELHKRIIGQ 521
Query: 382 DEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLD 441
++AVKA+S+AIRR R GLK+P RP SFIF+GP+GVGK+EL+KALA + FG ++A+I++D
Sbjct: 522 EDAVKAVSKAIRRTRAGLKDPKRPSGSFIFAGPSGVGKTELSKALANFLFGDDDALIQID 581
Query: 442 MSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQI 501
M EF +R T S+L G+PPGYVGY EGGQLTE VRR+P++VVLFDEIEKAH +++N +LQ+
Sbjct: 582 MGEFHDRFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNSLLQV 641
Query: 502 LEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVT 561
LEDGRLTD +GRTVDFKNT+LI TSN+G+S I K +G ++ Y R+K V
Sbjct: 642 LEDGRLTDGQGRTVDFKNTVLIFTSNLGTSDISKP---VGLGFSQTGGENDYERMKQKVN 698
Query: 562 EELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRER 621
+ELK++FRPEFLNR+D++IVF QLT+ E+ + D+M+ V ++LK+KD+ L++T++ +
Sbjct: 699 DELKKHFRPEFLNRIDDIIVFHQLTRDEIIRMVDLMIGRVANQLKSKDMALELTDKAKSL 758
Query: 622 VVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDS 669
+ + G++P G+RPLRR I R +ED ++EK+L E+ G V VDVD+
Sbjct: 759 LAKRGFDPVLGSRPLRRTIQREIEDQLSEKILFEEVGPGQVVTVDVDN 806
>gi|444306034|ref|ZP_21141807.1| ATPase [Arthrobacter sp. SJCon]
gi|443481608|gb|ELT44530.1| ATPase [Arthrobacter sp. SJCon]
Length = 809
Score = 773 bits (1997), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/696 (57%), Positives = 522/696 (75%), Gaps = 17/696 (2%)
Query: 4 ESTEAVGAGVGGGS---SGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
+ E GAGVG G + L+++G NLT+ A E KLDPV+GR+ ++ERV+Q+L R
Sbjct: 125 QGKETTGAGVGSGQPEGAPAGSVVLDQFGRNLTQAARENKLDPVIGREQEMERVMQVLSR 184
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNP LIGEPGVGKTA+ EGLAQ I GDVP+TI+ K++ TLD+G LVAG++YRG+FE
Sbjct: 185 RTKNNPVLIGEPGVGKTAVVEGLAQAIVRGDVPETIKDKQLYTLDLGSLVAGSRYRGDFE 244
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
ERLKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLD
Sbjct: 245 ERLKKVLKEIRTRGDIILFIDEIHTLVGAGAAEGAIDAASILKPMLARGELQTIGATTLD 304
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRKHIEKD ALERRFQP++V EPSV I+ILKGLR+RYE HH++ TD AL SAA L+
Sbjct: 305 EYRKHIEKDAALERRFQPIQVKEPSVAHAIEILKGLRDRYEAHHRVTITDGALASAASLA 364
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
+YISDRFLPDKAIDLIDEAG+R+R+R P E + +++ + ++ EK A+ QDFE
Sbjct: 365 ERYISDRFLPDKAIDLIDEAGARLRIRRMTAPPELKAMDERIAKLKMEKESAIDAQDFEG 424
Query: 301 AGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVE 357
A LRD+E + A+ + KE D ++EVD I +++ TGIPV
Sbjct: 425 AASLRDKEQKMIAERAE-----KERHWKSGGMDD----ISEVDEDLIAEVLANSTGIPVF 475
Query: 358 KVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGV 417
K++ +ES RLLKMEE LHKRV+GQDEA+KA+S+AIRR R GLK+P RP SFIF+GPTGV
Sbjct: 476 KLTEEESSRLLKMEEELHKRVVGQDEAIKALSQAIRRTRAGLKDPKRPGGSFIFAGPTGV 535
Query: 418 GKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRR 477
GK+ELAKALA + FG E+A+I LDMSE+ E+HTVS+L G+PPGYVGY EGGQLTE VRRR
Sbjct: 536 GKTELAKALAEFLFGEEDALITLDMSEYSEKHTVSRLFGAPPGYVGYEEGGQLTEKVRRR 595
Query: 478 PYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGG 537
P++VVLFDE+EKAH D+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N+G+ I K
Sbjct: 596 PFSVVLFDEVEKAHADLFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNLGTRDISK-S 654
Query: 538 RRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIM 597
GF D + + YNR+++ VTEELKQ+FRPEFLNR+D+++VF QLT+ E+ EI D+
Sbjct: 655 VATGFQSGTDTQ-TGYNRMRARVTEELKQHFRPEFLNRVDDVVVFPQLTQDEIIEIVDLF 713
Query: 598 LKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREI 657
+ + RLK KD+ +++T+ + + GY+P+ GARPLRR I R +ED ++EK+L +I
Sbjct: 714 VTRLEKRLKDKDMGIELTKAAKVLLATRGYDPAMGARPLRRTIQREIEDQLSEKILFGDI 773
Query: 658 KEGDSVIVDVDSDGNVTVLNGSSGAPESLADPLPVV 693
GD V+VDV+ +G+ + A + + P V
Sbjct: 774 HPGDIVVVDVEGEGDDAKFTFAGNAKPRIPEIAPSV 809
>gi|23464638|ref|NP_695241.1| protease [Bifidobacterium longum NCC2705]
gi|23325195|gb|AAN23877.1| protease [Bifidobacterium longum NCC2705]
Length = 869
Score = 773 bits (1997), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/664 (57%), Positives = 519/664 (78%), Gaps = 8/664 (1%)
Query: 8 AVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPC 67
A GV + + L+++G NLT A EGKLDPV+GR +IERV+ +L RRTKNNP
Sbjct: 158 ANAGGVTDKQNKSGSAILDQFGRNLTAEAAEGKLDPVIGRTNEIERVMVVLSRRTKNNPV 217
Query: 68 LIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLM 127
LIGEPGVGKTA+ EGLAQ+I +GDVP+T++GK+V +LD+G +VAG++YRG+FEERLKK++
Sbjct: 218 LIGEPGVGKTAVVEGLAQKIQAGDVPETLKGKQVYSLDLGSMVAGSRYRGDFEERLKKVL 277
Query: 128 EEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIE 187
+EIK +I+LFIDE+HT++GAG+A+GA+ A+++LKP LARGELQ IGATT DEYRK+IE
Sbjct: 278 KEIKTRGDIVLFIDEIHTIVGAGSADGALGASDMLKPMLARGELQTIGATTTDEYRKYIE 337
Query: 188 KDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDR 247
KD ALERRFQP++V EP++ ETI+ILKGLR RYE HH + TD AL SAA+LS +YI DR
Sbjct: 338 KDAALERRFQPIQVHEPTIAETIEILKGLRSRYENHHHVTITDGALQSAAELSSRYIQDR 397
Query: 248 FLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDR 307
LPDKAIDLIDEAG+R+R++ P E +EL++++ +I +K+EA++GQDFEKA ELRD+
Sbjct: 398 NLPDKAIDLIDEAGARLRIKRLTAPPELKELDEKIAKIAADKDEAIKGQDFEKAAELRDK 457
Query: 308 EMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRL 367
+ L+A K KE S E E+ DV VV E I ++S+ TGIPV K++ ES +L
Sbjct: 458 QEKLEAD-----RKQKEDSWREGES-DVKMVVDEDVIAEVISSTTGIPVFKLTQAESKKL 511
Query: 368 LKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALA 427
L ME LHKR+IGQDEAV A+SR+IRR RVGLK+P RP SFIF+GPTGVGK+ELAK LA
Sbjct: 512 LNMEAELHKRIIGQDEAVSALSRSIRRTRVGLKDPKRPSGSFIFAGPTGVGKTELAKTLA 571
Query: 428 AYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEI 487
+ F E+A+IR+DMSEF E++ S+L G+PPGYVGY EGG+LTE VRR+P++VVLFDEI
Sbjct: 572 EFLFDDEDALIRVDMSEFSEKYAASRLFGAPPGYVGYEEGGELTEKVRRKPFSVVLFDEI 631
Query: 488 EKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYD 547
EKAHPD+FN +LQ+L+DG LTD +GR VDFKNT++I+T+N+G+ I K GF+L +
Sbjct: 632 EKAHPDIFNTLLQVLDDGHLTDGQGRKVDFKNTIIILTTNLGTRDIAKAA-NTGFNLGAN 690
Query: 548 EKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKT 607
+SSY R+K V+ ELKQ FRPEFLNRLD++IVF+QLT+ +V++I D+ +K++ DRL
Sbjct: 691 -NESSYQRMKDQVSSELKQQFRPEFLNRLDDIIVFKQLTEPQVRQIVDLDVKQLNDRLFD 749
Query: 608 KDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDV 667
+ + L++T+ ++ + ++G++P GARPLRR I R +ED+++EK+L ++++G VIVD
Sbjct: 750 RHMSLELTDAAKDLLAQKGFDPLLGARPLRRVIQRDIEDAISEKILMGDLEDGQRVIVDA 809
Query: 668 DSDG 671
+ +G
Sbjct: 810 EGEG 813
>gi|134097027|ref|YP_001102688.1| ATP-dependent Clp protease [Saccharopolyspora erythraea NRRL 2338]
gi|133909650|emb|CAL99762.1| putative ATP-dependent Clp protease [Saccharopolyspora erythraea
NRRL 2338]
Length = 853
Score = 773 bits (1997), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/668 (57%), Positives = 519/668 (77%), Gaps = 17/668 (2%)
Query: 4 ESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTK 63
E EA G G G SS L+++G NLT+ A E KLDPV+GR+ +IER++Q+L RRTK
Sbjct: 149 EPAEAGGRGEGTPSSS---LVLDQFGRNLTQSARESKLDPVIGREKEIERIMQVLSRRTK 205
Query: 64 NNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERL 123
NNP LIGE GVGKTA+ EGLAQ++ G+VP+T++ K++ TLD+G LVAG++YRG+FEERL
Sbjct: 206 NNPVLIGEAGVGKTAVVEGLAQKVVKGEVPETLKDKQLYTLDLGSLVAGSRYRGDFEERL 265
Query: 124 KKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYR 183
KK+++EIK +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTL+EYR
Sbjct: 266 KKVLKEIKTRGDIILFIDEIHTLVGAGAAEGAIDAASILKPMLARGELQTIGATTLEEYR 325
Query: 184 KHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQY 243
K++EKDPALERRFQP++V EPS++ TI+ILKGLR+RYE HH++ TD ALVSAA L+ +Y
Sbjct: 326 KYVEKDPALERRFQPIQVGEPSLEHTIEILKGLRDRYEAHHRVSITDGALVSAATLADRY 385
Query: 244 ISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGE 303
I+DRFLPDKAIDLIDEAG+R+R+R P + RE ++++ + ++K A+ QDFE+A
Sbjct: 386 INDRFLPDKAIDLIDEAGARMRIRRMTAPPDLREFDEKIADVRRDKESAIDAQDFERAAR 445
Query: 304 LRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKVS 360
LRD E L Q K+ + + +AGD+ VV EVD I +++ WTGIPV K++
Sbjct: 446 LRDEEKQLLGQ--------KDEREKQWKAGDL-DVVAEVDDEQIAEVLANWTGIPVFKLT 496
Query: 361 TDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 420
+E+ RLL+ME+ LHKR+IGQD+AVKA+S+AIRR R GLK+P RP SFIF+GP+GVGK+
Sbjct: 497 EEETTRLLRMEDELHKRIIGQDDAVKAVSQAIRRTRAGLKDPKRPSGSFIFAGPSGVGKT 556
Query: 421 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 480
EL+KALA + FG ++A++++DM EF +R+T S+L G+PPGYVGY EGGQLTE VRR+P++
Sbjct: 557 ELSKALAEFLFGDDDALVQIDMGEFHDRYTASRLFGAPPGYVGYEEGGQLTEKVRRKPFS 616
Query: 481 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI 540
VVLFDEIEKAH +++N +LQ+LEDGRLTD +GRTVDFKNT+LI TSN+G+ I K +
Sbjct: 617 VVLFDEIEKAHQEIYNTLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGTQDISK-AVGL 675
Query: 541 GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 600
GF D +S+Y R+KS V EE+K++FRPEFLNR+D++IVF QLT+ E+ ++ D++
Sbjct: 676 GFSAGTD-SESNYERMKSKVNEEMKKHFRPEFLNRIDDVIVFHQLTEAEIIQMVDLLGAR 734
Query: 601 VFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEG 660
V LK KD+ L++T ++ + + G++P GARPLRR I R +ED ++EK+L EI+ G
Sbjct: 735 VEKALKGKDMSLELTTLAKKLLAKRGFDPVLGARPLRRTIQREIEDRLSEKILFGEIEPG 794
Query: 661 DSVIVDVD 668
VIVDV+
Sbjct: 795 QIVIVDVE 802
>gi|296454596|ref|YP_003661739.1| ATPase domain-containing protein [Bifidobacterium longum subsp.
longum JDM301]
gi|296184027|gb|ADH00909.1| ATPase AAA-2 domain protein [Bifidobacterium longum subsp. longum
JDM301]
Length = 881
Score = 773 bits (1997), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/664 (57%), Positives = 519/664 (78%), Gaps = 8/664 (1%)
Query: 8 AVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPC 67
A GV + + L+++G NLT A EGKLDPV+GR +IERV+ +L RRTKNNP
Sbjct: 158 ANAGGVTDKQNKSGSAILDQFGRNLTVEAAEGKLDPVIGRTNEIERVMVVLSRRTKNNPV 217
Query: 68 LIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLM 127
LIGEPGVGKTA+ EGLAQ+I +GDVP+T++GK+V +LD+G +VAG++YRG+FEERLKK++
Sbjct: 218 LIGEPGVGKTAVVEGLAQKIQAGDVPETLKGKQVYSLDLGSMVAGSRYRGDFEERLKKVL 277
Query: 128 EEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIE 187
+EIK +I+LFIDE+HT++GAG+A+GA+ A+++LKP LARGELQ IGATT DEYRK+IE
Sbjct: 278 KEIKTRGDIVLFIDEIHTIVGAGSADGALGASDMLKPMLARGELQTIGATTTDEYRKYIE 337
Query: 188 KDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDR 247
KD ALERRFQP++V EP++ ETI+ILKGLR RYE HH + TD AL SAA+LS +YI DR
Sbjct: 338 KDAALERRFQPIQVHEPTIAETIEILKGLRSRYENHHHVTITDGALQSAAELSSRYIQDR 397
Query: 248 FLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDR 307
LPDKAIDLIDEAG+R+R++ P E +EL++++ +I +K+EA++GQDFEKA ELRD+
Sbjct: 398 NLPDKAIDLIDEAGARLRIKRLTAPPELKELDEKIAKIAADKDEAIKGQDFEKAAELRDK 457
Query: 308 EMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRL 367
+ L+A K KE S E E+ DV VV E I ++S+ TGIPV K++ ES +L
Sbjct: 458 QEKLEAD-----RKQKEDSWREGES-DVKMVVDEDVIAEVISSTTGIPVFKLTQAESKKL 511
Query: 368 LKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALA 427
L ME LHKR+IGQDEAV A+SR+IRR RVGLK+P RP SFIF+GPTGVGK+ELAK LA
Sbjct: 512 LNMEAELHKRIIGQDEAVSALSRSIRRTRVGLKDPKRPSGSFIFAGPTGVGKTELAKTLA 571
Query: 428 AYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEI 487
+ F E+A+IR+DMSEF E++ S+L G+PPGYVGY EGG+LTE VRR+P++VVLFDEI
Sbjct: 572 EFLFDDEDALIRVDMSEFSEKYAASRLFGAPPGYVGYEEGGELTEKVRRKPFSVVLFDEI 631
Query: 488 EKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYD 547
EKAHPD+FN +LQ+L+DG LTD +GR VDFKNT++I+T+N+G+ I K GF+L +
Sbjct: 632 EKAHPDIFNTLLQVLDDGHLTDGQGRKVDFKNTIIILTTNLGTRDIAKAA-NTGFNLGAN 690
Query: 548 EKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKT 607
+SSY R+K V+ ELKQ FRPEFLNRLD++IVF+QLT+ +V++I D+ +K++ DRL
Sbjct: 691 -NESSYQRMKDQVSSELKQQFRPEFLNRLDDIIVFKQLTEPQVRQIVDLDVKQLNDRLFD 749
Query: 608 KDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDV 667
+ + L++T+ ++ + ++G++P GARPLRR I R +ED+++EK+L ++++G VIVD
Sbjct: 750 RHMSLELTDAAKDLLAQKGFDPLLGARPLRRVIQRDIEDAISEKILMGDLEDGQRVIVDA 809
Query: 668 DSDG 671
+ +G
Sbjct: 810 EGEG 813
>gi|297627171|ref|YP_003688934.1| ATP-dependent Clp protease ATP-binding protein [Propionibacterium
freudenreichii subsp. shermanii CIRM-BIA1]
gi|296922936|emb|CBL57518.1| chaperone clpC (Clp-family ATP-binding protease) (ATP-dependent Clp
protease ATP-binding subunit) [Propionibacterium
freudenreichii subsp. shermanii CIRM-BIA1]
Length = 858
Score = 773 bits (1997), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/665 (57%), Positives = 510/665 (76%), Gaps = 9/665 (1%)
Query: 3 GESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRT 62
G+ A +G G+S N L+++G NLT+ A + KLDPV+GRQ ++ERV+ +L RRT
Sbjct: 151 GQPATAGAPEMGPGTSTNN-GALDQFGRNLTQAARDNKLDPVIGRQKEVERVMTVLSRRT 209
Query: 63 KNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEER 122
KNNP LIGEPGVGKTA+ EGLAQ I GDVP+T+ K++ TLD+G LVAG++YRG+FEER
Sbjct: 210 KNNPVLIGEPGVGKTAVVEGLAQAIVRGDVPETLRDKQIYTLDLGALVAGSRYRGDFEER 269
Query: 123 LKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEY 182
KK+++EIK +++LFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEY
Sbjct: 270 FKKVLKEIKTRGDVMLFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIGATTLDEY 329
Query: 183 RKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQ 242
RKHIEKD ALERRFQP++V EPSV TI+ILKGLR+RYE HH++ TDEAL + A L+ +
Sbjct: 330 RKHIEKDAALERRFQPIQVDEPSVQLTIEILKGLRDRYEAHHRVTITDEALSAGANLADR 389
Query: 243 YISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAG 302
YI DRFLPDKAIDLIDEAG+R+R+ P + RE + ++ EK A+ QDFE A
Sbjct: 390 YIQDRFLPDKAIDLIDEAGARMRIARMTAPPDLREFDDKIAATRAEKEAAIDHQDFEAAA 449
Query: 303 ELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTD 362
+LRD E L A + KE + E E+ D VV E +I ++S+ TG+PV +++ +
Sbjct: 450 KLRDDERKLTAARAE-----KETAWREGES-DTPAVVGEEEIAEVLSSSTGVPVARLTEE 503
Query: 363 ESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSEL 422
ES RLL ME+ +HKR IGQDEAVKAISR+IRR R GLK+PNRP SFIF+GP+GVGK+EL
Sbjct: 504 ESQRLLNMEDEIHKRYIGQDEAVKAISRSIRRTRAGLKDPNRPSGSFIFAGPSGVGKTEL 563
Query: 423 AKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVV 482
KAL + FG E+A+I LDMSE+ E+HT S++ GSPPGYVGY EGGQLTE VRR+P++V+
Sbjct: 564 TKALTEFLFGDEDALITLDMSEYSEKHTASRMFGSPPGYVGYEEGGQLTEKVRRKPFSVI 623
Query: 483 LFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGF 542
LFDEIEKAHPD+FN +LQIL++GRLTD++GR VDFKNT+++MT+N+GS I + G +GF
Sbjct: 624 LFDEIEKAHPDIFNSLLQILDEGRLTDAQGRVVDFKNTVIVMTTNLGSRDISR-GVNLGF 682
Query: 543 DLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVF 602
D ++SY ++KS V+EELKQ+FRPEFLNR+DE++VF QL++ ++ I D+M+ ++
Sbjct: 683 SKTGD-TENSYEQMKSKVSEELKQHFRPEFLNRVDEVVVFHQLSQDDILHIVDLMVGQIE 741
Query: 603 DRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDS 662
+RL +D+ +++T RE V + G++P GARPLRRAI R +ED ++EK+L ++K G
Sbjct: 742 NRLGDRDMGIELTPAARELVGKRGFDPVLGARPLRRAIQRDIEDPISEKILYGDLKAGSI 801
Query: 663 VIVDV 667
V+VDV
Sbjct: 802 VLVDV 806
>gi|326328759|ref|ZP_08195095.1| ATP-dependent Clp protease, ATP-binding subunit ClpC
[Nocardioidaceae bacterium Broad-1]
gi|325953381|gb|EGD45385.1| ATP-dependent Clp protease, ATP-binding subunit ClpC
[Nocardioidaceae bacterium Broad-1]
Length = 861
Score = 773 bits (1996), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/672 (58%), Positives = 512/672 (76%), Gaps = 14/672 (2%)
Query: 24 TLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGL 83
L+++G NLT+ A EGKLDP++GR+ QIERV+Q+L RRTKNNP LIGEPGVGKT+I EGL
Sbjct: 174 VLDQFGRNLTQDAREGKLDPIIGREGQIERVMQVLSRRTKNNPVLIGEPGVGKTSIVEGL 233
Query: 84 AQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEV 143
AQ I G+VP+T++ K++ TLD+G LVAG++YRG+FEERLKK+++EIK +I+LFIDE+
Sbjct: 234 AQDIVKGNVPETLKDKQIYTLDLGALVAGSRYRGDFEERLKKVLKEIKTRGDIVLFIDEI 293
Query: 144 HTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPE 203
HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEYRK++EKD ALERRFQP++VPE
Sbjct: 294 HTLVGAGAAEGAIDAASILKPMLARGELQTIGATTLDEYRKYLEKDAALERRFQPIQVPE 353
Query: 204 PSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSR 263
P++ I++LKG+R+RYE HH++ TDEALV+A ++ +YISDRFLPDKAIDLIDEAGSR
Sbjct: 354 PTIAVAIEMLKGIRDRYEAHHRVTITDEALVAAVTMADRYISDRFLPDKAIDLIDEAGSR 413
Query: 264 VRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGK 323
+R+R P + RE + ++ + + K A+ GQDFE A LRD E L+ K
Sbjct: 414 LRIRRMTAPADLREYDDKIADVRQRKEAAIDGQDFEAAARLRDEE-------KQLIAKKA 466
Query: 324 EMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIG 380
E KA AGD+ V EVD I +++ TGIP+ +V+ +ES RLL+ME+ LHKRVIG
Sbjct: 467 EREKA-WRAGDMDE-VAEVDEELIAEVLAVATGIPIVQVNEEESARLLRMEDELHKRVIG 524
Query: 381 QDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRL 440
QDEAVKA+SRAIRR R GLK+P RP SFIF+GP+GVGK+ L+K LA + FG E+A+I+L
Sbjct: 525 QDEAVKALSRAIRRTRAGLKDPKRPGGSFIFAGPSGVGKTWLSKTLAEFLFGDEDALIQL 584
Query: 441 DMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQ 500
DMSEF E+HTVS+L GSPPGYVGY EGGQLTE VRR+P++VVLFDE+EKAHPD+FN +LQ
Sbjct: 585 DMSEFGEKHTVSRLFGSPPGYVGYEEGGQLTEKVRRKPFSVVLFDEVEKAHPDIFNSLLQ 644
Query: 501 ILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLV 560
ILE+GRLTDS+GR VDFKNT++IMT+N+G+ I K +GF D K SY R+KS V
Sbjct: 645 ILEEGRLTDSQGRVVDFKNTVIIMTTNLGTRDIAK-SVNLGFSQASD-KAGSYERMKSKV 702
Query: 561 TEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRE 620
++ELKQ+FRPEFLNR+DE+IVF L++ ++ + D M+ V RLK +D+ +++T ++
Sbjct: 703 SDELKQHFRPEFLNRVDEVIVFPPLSQEQIIAMVDNMIGAVEIRLKDRDMGIELTTAAKK 762
Query: 621 RVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNGSS 680
+ E G++P GARPLRR + R +ED +AEKML +I G V+VDV+ +G
Sbjct: 763 LLAERGFDPVLGARPLRRTVQREIEDVLAEKMLYGDIGPGSIVVVDVEGEGPAAKFTFEG 822
Query: 681 GAPESLADPLPV 692
S+ D P+
Sbjct: 823 QKRSSIPDVPPL 834
>gi|213691598|ref|YP_002322184.1| ATPase AAA [Bifidobacterium longum subsp. infantis ATCC 15697 = JCM
1222]
gi|384198734|ref|YP_005584477.1| Clp protease [Bifidobacterium longum subsp. infantis ATCC 15697 =
JCM 1222]
gi|213523059|gb|ACJ51806.1| ATPase AAA-2 domain protein [Bifidobacterium longum subsp. infantis
ATCC 15697 = JCM 1222]
gi|320457686|dbj|BAJ68307.1| Clp protease [Bifidobacterium longum subsp. infantis ATCC 15697 =
JCM 1222]
Length = 861
Score = 773 bits (1996), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/669 (57%), Positives = 521/669 (77%), Gaps = 8/669 (1%)
Query: 3 GESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRT 62
G+ A GV + + L+++G NLT A EGKLDPV+GR +IERV+ +L RRT
Sbjct: 151 GKGELANAGGVADKQNKSGSAILDQFGRNLTAEAAEGKLDPVIGRTNEIERVMVVLSRRT 210
Query: 63 KNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEER 122
KNNP LIGEPGVGKTA+ EGLAQ+I +GDVP+T++GK+V +LD+G +VAG++YRG+FEER
Sbjct: 211 KNNPVLIGEPGVGKTAVVEGLAQKIQAGDVPETLKGKQVYSLDLGSMVAGSRYRGDFEER 270
Query: 123 LKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEY 182
LKK+++EIK +I+LFIDE+HT++GAG+A+GA+ A+++LKP LARGELQ IGATT DEY
Sbjct: 271 LKKVLKEIKTRGDIVLFIDEIHTIVGAGSADGALGASDMLKPMLARGELQTIGATTTDEY 330
Query: 183 RKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQ 242
RK+IEKD ALERRFQP++V EP++ ETI+ILKGLR RYE HH + TD AL SAA+LS +
Sbjct: 331 RKYIEKDAALERRFQPIQVHEPTIAETIEILKGLRSRYENHHHVTITDGALQSAAELSSR 390
Query: 243 YISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAG 302
YI DR LPDKAIDLIDEAG+R+R++ P E +EL++++ +I +K+EA++GQDFEKA
Sbjct: 391 YIQDRNLPDKAIDLIDEAGARLRIKRLTAPPELKELDEKIAKIAADKDEAIKGQDFEKAA 450
Query: 303 ELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTD 362
ELRD++ L+A K KE S E E+ DV VV E I ++S+ TGIPV K++
Sbjct: 451 ELRDKQEKLEAD-----RKQKEDSWREGES-DVKMVVDEDVIAEVISSTTGIPVFKLTQA 504
Query: 363 ESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSEL 422
ES +LL ME LHKR+IGQDEAV A+SR+IRR RVGLK+P RP SFIF+GPTGVGK+EL
Sbjct: 505 ESKKLLSMETELHKRIIGQDEAVSALSRSIRRTRVGLKDPKRPSGSFIFAGPTGVGKTEL 564
Query: 423 AKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVV 482
AK LA + F E+A+IR+DMSEF E++ S+L G+PPGYVGY EGG+LTE VRR+P++VV
Sbjct: 565 AKTLAEFLFDDEDALIRVDMSEFSEKYAASRLFGAPPGYVGYEEGGELTEKVRRKPFSVV 624
Query: 483 LFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGF 542
LFDEIEKAHPD+FN +LQ+L+DG LTD +GR VDFKNT++I+T+N+G+ I K GF
Sbjct: 625 LFDEIEKAHPDIFNTLLQVLDDGHLTDGQGRKVDFKNTIIILTTNLGTRDIAKAA-NTGF 683
Query: 543 DLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVF 602
+L + +SSY R+K V+ ELKQ FRPEFLNRLD++IVF+QLT+ +V++I D+ +K++
Sbjct: 684 NLGAN-NESSYQRMKDQVSSELKQQFRPEFLNRLDDIIVFKQLTEPQVRQIVDLDVKQLN 742
Query: 603 DRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDS 662
DRL + + L++T+ ++ + ++G++P GARPLRR I R +ED+++EK+L ++++G
Sbjct: 743 DRLFDRHMSLELTDAAKDLLAQKGFDPLLGARPLRRVIQRDIEDAISEKILMGDLEDGQR 802
Query: 663 VIVDVDSDG 671
V+VD + +G
Sbjct: 803 VMVDAEGEG 811
>gi|145296675|ref|YP_001139496.1| hypothetical protein cgR_2580 [Corynebacterium glutamicum R]
gi|140846595|dbj|BAF55594.1| hypothetical protein [Corynebacterium glutamicum R]
Length = 925
Score = 773 bits (1996), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/649 (58%), Positives = 509/649 (78%), Gaps = 16/649 (2%)
Query: 25 LEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLA 84
L+++G NLT+ A++GKLDPVVGR +IER++Q+L RRTKNNP LIGEPGVGKTA+ EGLA
Sbjct: 190 LDQFGRNLTQAAKDGKLDPVVGRDKEIERIMQVLSRRTKNNPVLIGEPGVGKTAVVEGLA 249
Query: 85 QRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVH 144
I +G VP+T++ K+V +LD+G LVAG++YRG+FEERLKK+++EI Q +IILFIDE+H
Sbjct: 250 LDIVNGKVPETLKDKQVYSLDLGSLVAGSRYRGDFEERLKKVLKEINQRGDIILFIDEIH 309
Query: 145 TLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEP 204
TL+GAGAAEGAIDAA++LKP LARGELQ IGATTLDEYRKHIEKD ALERRFQPV+VPEP
Sbjct: 310 TLVGAGAAEGAIDAASLLKPKLARGELQTIGATTLDEYRKHIEKDAALERRFQPVQVPEP 369
Query: 205 SVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRV 264
SVD T++ILKGLR+RYE HH++ TD AL +AAQL+ +YI+DRFLPDKA+DLIDEAG+R+
Sbjct: 370 SVDLTVEILKGLRDRYEAHHRVSITDGALTAAAQLADRYINDRFLPDKAVDLIDEAGARM 429
Query: 265 RLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKE 324
R++ P RE+++ + + +EK A+ QDFEKA LRD+E L G+E
Sbjct: 430 RIKRMTAPSSLREVDERIADVRREKEAAIDAQDFEKAAGLRDKERKL----------GEE 479
Query: 325 MSKAETE--AGDVGPV--VTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIG 380
++ E + +GD+ + V E I +++ WTGIPV K++ ES RLL ME+ LHKR+IG
Sbjct: 480 RAEKEKQWRSGDLEDIAEVGEEQIAEVLANWTGIPVFKLTEAESSRLLNMEDELHKRIIG 539
Query: 381 QDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRL 440
Q+EAVKA+SRAIRR R GLK+P RP SFIF+GP+GVGK+EL+KALA + FG ++++I++
Sbjct: 540 QEEAVKAVSRAIRRTRAGLKDPKRPSGSFIFAGPSGVGKTELSKALAGFLFGDDDSLIQI 599
Query: 441 DMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQ 500
DM EF +R T S+L G+PPGYVGY EGGQLTE VRR+P++VVLFDEIEKAH +++N +LQ
Sbjct: 600 DMGEFHDRFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHKEIYNTLLQ 659
Query: 501 ILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYD-EKDSSYNRIKSL 559
+LEDGRLTD +GR VDFKNT+LI TSN+G+S I K +GF + + D+ Y+R+K+
Sbjct: 660 VLEDGRLTDGQGRIVDFKNTVLIFTSNLGTSDISK-AVGLGFSGSSETDSDAQYDRMKNK 718
Query: 560 VTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFR 619
V +ELK++FRPEFLNR+DE++VF QLTK ++ ++ D+++ V + L KD+ +++TE+ +
Sbjct: 719 VHDELKKHFRPEFLNRIDEIVVFHQLTKDQIVQMVDLLIGRVSNALAEKDMSIELTEKAK 778
Query: 620 ERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVD 668
+ + G++P GARPLRR I R +ED M+EK+L EI G+ V VDV+
Sbjct: 779 DLLANRGFDPVLGARPLRRTIQREIEDQMSEKILFGEIGAGEIVTVDVE 827
>gi|256374490|ref|YP_003098150.1| ATPase AAA [Actinosynnema mirum DSM 43827]
gi|255918793|gb|ACU34304.1| ATPase AAA-2 domain protein [Actinosynnema mirum DSM 43827]
Length = 852
Score = 773 bits (1996), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 383/668 (57%), Positives = 519/668 (77%), Gaps = 17/668 (2%)
Query: 4 ESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTK 63
E EA G G G SS L+++G NLT +A EGKLDPV+GR +IERV+Q+L RRTK
Sbjct: 150 EPAEAGGRGEGTPSSS---LVLDQFGRNLTSMAREGKLDPVIGRAKEIERVMQVLSRRTK 206
Query: 64 NNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERL 123
NNP LIGEPGVGKTA+ EGLAQ + G+VP+T++ K++ TLD+ LVAG++YRG+FEERL
Sbjct: 207 NNPVLIGEPGVGKTAVVEGLAQMVVKGEVPETLKDKQLYTLDLSSLVAGSRYRGDFEERL 266
Query: 124 KKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYR 183
KK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEYR
Sbjct: 267 KKVLKEIRTRGDIILFIDEIHTLVGAGAAEGAIDAASILKPMLARGELQTIGATTLDEYR 326
Query: 184 KHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQY 243
K++EKDPALERRFQP++V EPS++ TI+ILKGLR+RYE HH++ TD ALV+AA L+ +Y
Sbjct: 327 KYVEKDPALERRFQPIQVGEPSLEHTIEILKGLRDRYEAHHRVSITDSALVAAATLADRY 386
Query: 244 ISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGE 303
I+DR+LPDKAIDLIDEAG+R+R+R P + RE ++++ + ++K A+ QDFE+A +
Sbjct: 387 INDRYLPDKAIDLIDEAGARMRIRRMTAPPDLREFDEKIADVRRDKESAIDAQDFERAAK 446
Query: 304 LRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKVS 360
LRD+E L Q K + + + GD+ VV EVD I +++ WTGIPV K++
Sbjct: 447 LRDQEKTLLGQ--------KAEREKQWKDGDL-DVVAEVDEEQIAEVLANWTGIPVFKLT 497
Query: 361 TDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 420
+E+ RLL+ME+ LHKR+IGQ EAVKA+S+AIRR R GLK+P RP SFIF+GP+GVGK+
Sbjct: 498 EEETTRLLRMEDELHKRIIGQVEAVKAVSQAIRRTRAGLKDPKRPAGSFIFAGPSGVGKT 557
Query: 421 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 480
EL+KALA + FG ++A+I++DM EF +R+T S+L G+PPGYVGY EGGQLTE VRR+P++
Sbjct: 558 ELSKALANFLFGEDDALIQIDMGEFHDRYTASRLFGAPPGYVGYEEGGQLTEKVRRKPFS 617
Query: 481 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI 540
VVLFDEIEKAH +V+N +LQ+LEDGRLTD +GRTVDFKNT++I TSN+G+S I K +
Sbjct: 618 VVLFDEIEKAHNEVYNTLLQVLEDGRLTDGQGRTVDFKNTVIIFTSNLGTSDISK-AVGL 676
Query: 541 GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 600
GF D S+Y R+K+ V +ELK++FRPEFLNR+D++IVF QLT+ E+ + D+++
Sbjct: 677 GFASGQDNA-SNYERMKNKVNDELKKHFRPEFLNRIDDIIVFHQLTRDEIIRMVDLLIAR 735
Query: 601 VFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEG 660
V +LK KD+ +++TE+ ++ + + G++P GARPLRR I R +ED ++EK+L E++ G
Sbjct: 736 VETQLKNKDMAIELTEKAKQLLAKRGFDPVLGARPLRRTIQREIEDQLSEKILFGELQPG 795
Query: 661 DSVIVDVD 668
VI DV+
Sbjct: 796 QIVITDVE 803
>gi|255326112|ref|ZP_05367199.1| negative regulator of genetic competence ClpC/mecB [Rothia
mucilaginosa ATCC 25296]
gi|255296823|gb|EET76153.1| negative regulator of genetic competence ClpC/mecB [Rothia
mucilaginosa ATCC 25296]
Length = 851
Score = 773 bits (1996), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/683 (56%), Positives = 518/683 (75%), Gaps = 17/683 (2%)
Query: 11 AGVGGGSSGNKMPT----LEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNP 66
AGVG G+S P L+++G NLT A EG+LDPV+GR ++ERV+Q+L RRTKNNP
Sbjct: 156 AGVGAGNSREGTPAGSTILDQFGRNLTAAAREGELDPVIGRHKEMERVMQVLSRRTKNNP 215
Query: 67 CLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKL 126
LIGEPGVGKTA+ EGLAQ I GDVP+T++ K + TLD+G LVAG++YRG+FEERLKK+
Sbjct: 216 VLIGEPGVGKTAVVEGLAQAIVHGDVPETLKDKHLYTLDLGSLVAGSRYRGDFEERLKKV 275
Query: 127 MEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHI 186
++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEYRKHI
Sbjct: 276 LKEIRSRGDIILFIDEIHTLVGAGAAEGAIDAASILKPMLARGELQTIGATTLDEYRKHI 335
Query: 187 EKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISD 246
EKD ALERRFQP++V EPS + +QILKG+R++YE HH++ TDEA+ +A L+ +YISD
Sbjct: 336 EKDAALERRFQPIQVEEPSQELAVQILKGVRDKYEAHHRVTITDEAIETAVNLAARYISD 395
Query: 247 RFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRD 306
RFLPDKA+DLIDEAG+R+R++ P E + L+++ ++ ++K +A+ QD+EKA LRD
Sbjct: 396 RFLPDKAVDLIDEAGARLRIKRMTAPPEIKLLDEKAAKLRQQKEDAINSQDYEKAAGLRD 455
Query: 307 REMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDR 366
+E + A+ +E KA E GD VT I +++A TG+PV K++ +ES R
Sbjct: 456 QEQKVLAE-------KEEAEKAWREGGDAFGTVTPEVISEVLAASTGVPVYKITEEESSR 508
Query: 367 LLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKAL 426
LL ME+ LHKRVIGQ+ A+ A+SRAIRR R GLK+P RP SFIF+GPTGVGK+ELAKAL
Sbjct: 509 LLTMEQELHKRVIGQEHAIAALSRAIRRTRAGLKDPRRPGGSFIFAGPTGVGKTELAKAL 568
Query: 427 AAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDE 486
A + FG E+++I LDMSE+ E+HTVS+L G+PPGYVGY EGGQLTE VRR+P++VVLFDE
Sbjct: 569 AEFLFGDEDSLITLDMSEYQEKHTVSRLFGAPPGYVGYDEGGQLTEKVRRKPFSVVLFDE 628
Query: 487 IEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI--GFDL 544
+EKAH D+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N+GS + RRI GF
Sbjct: 629 VEKAHADLFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNLGSRDV---NRRIPVGFQA 685
Query: 545 DYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDR 604
D+ + Y R+++ V E LK++FRPEFLNR+D++IVF QL++ E+ +I D+ + + R
Sbjct: 686 -MDDTAADYERMQARVMENLKEHFRPEFLNRVDDIIVFPQLSESEILQIVDLFVGRLAKR 744
Query: 605 LKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVI 664
L +D+ +++T + + +GY+PS GARPLRR + R +ED+++EK+L +IK G+ +
Sbjct: 745 LAEQDMSIELTNAAKVLMAAKGYDPSMGARPLRREMQRNIEDALSEKILFGDIKPGEKIT 804
Query: 665 VDVDSDGNVTVLNGSSGAPESLA 687
VDV+ +G+ SS + LA
Sbjct: 805 VDVEGEGDSAKFVFSSQPMKELA 827
>gi|443671357|ref|ZP_21136469.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Rhodococcus
sp. AW25M09]
gi|443416090|emb|CCQ14806.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Rhodococcus
sp. AW25M09]
Length = 825
Score = 773 bits (1996), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 384/671 (57%), Positives = 514/671 (76%), Gaps = 16/671 (2%)
Query: 3 GESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRT 62
G+ G+G G + + L+++G NLT+ A EGKLDPV+GR +IERV+Q+L RRT
Sbjct: 126 GKEPSESGSGRGEAGTPSTSLVLDQFGRNLTQAALEGKLDPVIGRAKEIERVMQVLSRRT 185
Query: 63 KNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEER 122
KNNP LIGEPGVGKTA+ EGLAQ I +G+VP+T++ K++ TLD+G LVAG++YRG+FEER
Sbjct: 186 KNNPVLIGEPGVGKTAVVEGLAQAIVNGEVPETLKDKQLYTLDLGSLVAGSRYRGDFEER 245
Query: 123 LKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEY 182
LKK+++EI +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEY
Sbjct: 246 LKKVLKEINTRGDIILFIDELHTLVGAGAAEGAIDAASILKPKLARGELQTIGATTLDEY 305
Query: 183 RKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQ 242
RK+IEKD ALERRFQPV+V EP+V+ TI+ILKGLR+RYE HH++ TD ALV+AA L+ +
Sbjct: 306 RKYIEKDAALERRFQPVQVGEPTVEHTIEILKGLRDRYEAHHRVSITDGALVAAATLADR 365
Query: 243 YISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAG 302
YI+DRFLPDKAIDLIDEAG+R+R+R P + RE + ++ +EK A+ QDFEKA
Sbjct: 366 YINDRFLPDKAIDLIDEAGARMRIRRMTAPPDLREFDDKIADARREKESAIDAQDFEKAA 425
Query: 303 ELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKV 359
LRD+E L Q + + + +GD+ VV EVD I ++ WTGIPV K+
Sbjct: 426 NLRDKEKTLVGQ--------RAEREKQWRSGDL-DVVAEVDDEQIAEVLGNWTGIPVFKL 476
Query: 360 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 419
+ +E+ RLL+ME+ LHKR+IGQ EAVKA+S+AIRR R GLK+P RP SFIF+GP+GVGK
Sbjct: 477 TEEETTRLLRMEDELHKRIIGQVEAVKAVSKAIRRTRAGLKDPKRPSGSFIFAGPSGVGK 536
Query: 420 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 479
+EL+KALA + FG ++A+I++DM EF +R T S+L G+PPGYVGY EGGQLTE VRR+P+
Sbjct: 537 TELSKALANFLFGEDDALIQIDMGEFHDRFTASRLFGAPPGYVGYEEGGQLTEKVRRKPF 596
Query: 480 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 539
+VVLFDEIEKAH +++N +LQ+LEDGRLTD +GRTVDFKNT+LI TSN+G++ I K
Sbjct: 597 SVVLFDEIEKAHSEIYNTLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGTADISKA--- 653
Query: 540 IGFDLDYDE-KDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIML 598
+G E S+Y R+K V +ELK++FRPEFLNR+D+++VF QLT+ E+ ++ D+ML
Sbjct: 654 VGLGFSSGEGTGSNYERMKLKVNDELKKHFRPEFLNRIDDIVVFHQLTRDEIIQMVDLML 713
Query: 599 KEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIK 658
V LK KD+ ++VTE+ + + + G++P GARPLRR I R +ED+++EK+L EI+
Sbjct: 714 NRVEGALKNKDMAIEVTEKAKSLLAKRGFDPVLGARPLRRTIQREIEDALSEKILFGEIE 773
Query: 659 EGDSVIVDVDS 669
G ++VDV++
Sbjct: 774 AGQIILVDVEN 784
>gi|269218173|ref|ZP_06162027.1| negative regulator of genetic competence ClpC/MecB [Actinomyces sp.
oral taxon 848 str. F0332]
gi|269212301|gb|EEZ78641.1| negative regulator of genetic competence ClpC/MecB [Actinomyces sp.
oral taxon 848 str. F0332]
Length = 861
Score = 773 bits (1995), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/675 (57%), Positives = 517/675 (76%), Gaps = 14/675 (2%)
Query: 4 ESTEAVGAGVGGGSSGNKMPT--LEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRR 61
+ E VG G GG G K + L++YG NLT+ A + KLDPV+GR + ERV+Q+L RR
Sbjct: 146 QGKEPVGVG-GGAREGTKAGSTVLDQYGRNLTQSARDHKLDPVIGRHMETERVMQVLSRR 204
Query: 62 TKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEE 121
TKNNP LIGEPGVGKTA+ EGLAQ IASGDVP+T++ K++ +LDMG LVAG++YRG+FE+
Sbjct: 205 TKNNPVLIGEPGVGKTAVVEGLAQAIASGDVPETLKDKQLYSLDMGSLVAGSRYRGDFED 264
Query: 122 RLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDE 181
R+KK+++EI +I+LFIDE+H+L+GAGAAEGA+DAA++LKP +ARGELQ IGATTLDE
Sbjct: 265 RMKKILKEINTRGDIVLFIDEIHSLVGAGAAEGALDAASLLKPMMARGELQVIGATTLDE 324
Query: 182 YRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSY 241
YRKHIEKD ALERRFQP++V +P+V +T++ILKGLR+RYE H++ TD+A+ +AA L+
Sbjct: 325 YRKHIEKDAALERRFQPIQVEQPTVAQTVEILKGLRDRYESFHRVTITDDAIDTAASLAD 384
Query: 242 QYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKA 301
+Y++DRFLPDKAIDLIDEAG+R+ +R P E RE+++ + + +EK A+ GQDFEKA
Sbjct: 385 RYVNDRFLPDKAIDLIDEAGARLAIRKMTAPPELREIDERIASVRREKEAAIDGQDFEKA 444
Query: 302 GELRDREMDLKAQISALVDKGKEMSKAETEAG-DVGPVVTEVDIQHIVSAWTGIPVEKVS 360
LRD E L +K E +A + D+ VV E + ++S TGIPV K+S
Sbjct: 445 ASLRDEEQRLG-------EKRAEREQAWKDGDMDIVSVVDEDLVTEVLSMATGIPVFKLS 497
Query: 361 TDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 420
ES +LL+MEE LHKRVIGQ+EAV A+S+AIRR R GLK+PNRP SFIF+GPTGVGK+
Sbjct: 498 EAESAKLLRMEEELHKRVIGQNEAVVALSQAIRRTRAGLKDPNRPGGSFIFAGPTGVGKT 557
Query: 421 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 480
ELAKALA + FG E A+I LDMSE+ E+H VS+L G+PPGYVGY EGGQLTE VRR+P++
Sbjct: 558 ELAKALAEFLFGDESALITLDMSEYSEKHAVSRLFGAPPGYVGYDEGGQLTEKVRRKPFS 617
Query: 481 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI 540
VVLFDE+EKAHPD+FN +LQILE+GRLTDS+GR VDFKNT++IMT+N+G+ I K G
Sbjct: 618 VVLFDEVEKAHPDLFNSLLQILEEGRLTDSQGRVVDFKNTIIIMTTNLGTKDIAK-GVTT 676
Query: 541 GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 600
GF D D +SY R+KS V E LK++FRPEFLNR+D+MIVF QL + E+ I D+M+ +
Sbjct: 677 GFQFDGDTT-TSYERMKSRVGEALKEHFRPEFLNRVDDMIVFPQLQREEILRIVDLMVGK 735
Query: 601 VFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEG 660
+ RL +++ L +T+R +E + + GY+P GARPLRRAI R +ED ++EK+L + +G
Sbjct: 736 LDQRLAKQEMHLVLTKRAKELLADRGYDPVLGARPLRRAIQRDIEDVLSEKLLFGDFAKG 795
Query: 661 DSVIVDVDSDGNVTV 675
+++ DVD + N+ V
Sbjct: 796 QTIVADVDEE-NIPV 809
>gi|417969541|ref|ZP_12610480.1| hypothetical protein CgS9114_00865 [Corynebacterium glutamicum
S9114]
gi|344046258|gb|EGV41924.1| hypothetical protein CgS9114_00865 [Corynebacterium glutamicum
S9114]
Length = 925
Score = 773 bits (1995), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/649 (58%), Positives = 509/649 (78%), Gaps = 16/649 (2%)
Query: 25 LEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLA 84
L+++G NLT+ A++GKLDPVVGR +IER++Q+L RRTKNNP LIGEPGVGKTA+ EGLA
Sbjct: 190 LDQFGRNLTQAAKDGKLDPVVGRDKEIERIMQVLSRRTKNNPVLIGEPGVGKTAVVEGLA 249
Query: 85 QRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVH 144
I +G VP+T++ K+V +LD+G LVAG++YRG+FEERLKK+++EI Q +IILFIDE+H
Sbjct: 250 LDIVNGKVPETLKDKQVYSLDLGSLVAGSRYRGDFEERLKKVLKEINQRGDIILFIDEIH 309
Query: 145 TLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEP 204
TL+GAGAAEGAIDAA++LKP LARGELQ IGATTLDEYRKHIEKD ALERRFQPV+VPEP
Sbjct: 310 TLVGAGAAEGAIDAASLLKPKLARGELQTIGATTLDEYRKHIEKDAALERRFQPVQVPEP 369
Query: 205 SVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRV 264
SVD T++ILKGLR+RYE HH++ TD AL +AAQL+ +YI+DRFLPDKA+DLIDEAG+R+
Sbjct: 370 SVDLTVEILKGLRDRYEAHHRVSITDGALTAAAQLADRYINDRFLPDKAVDLIDEAGARM 429
Query: 265 RLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKE 324
R++ P RE+++ + + +EK A+ QDFEKA LRD+E L G+E
Sbjct: 430 RIKRMTAPSSLREVDERIADVRREKEAAIDAQDFEKAAGLRDKERKL----------GEE 479
Query: 325 MSKAETE--AGDVGPV--VTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIG 380
++ E + +GD+ + V E I +++ WTGIPV K++ ES RLL ME+ LHKR+IG
Sbjct: 480 RAEKEKQWRSGDLEDIAEVGEEQIAEVLANWTGIPVFKLTEAESSRLLNMEDELHKRIIG 539
Query: 381 QDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRL 440
Q+EAVKA+SRAIRR R GLK+P RP SFIF+GP+GVGK+EL+KALA + FG ++++I++
Sbjct: 540 QEEAVKAVSRAIRRTRAGLKDPKRPSGSFIFAGPSGVGKTELSKALAGFLFGDDDSLIQI 599
Query: 441 DMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQ 500
DM EF +R T S+L G+PPGYVGY EGGQLTE VRR+P++VVLFDEIEKAH +++N +LQ
Sbjct: 600 DMGEFHDRFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHKEIYNTLLQ 659
Query: 501 ILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYD-EKDSSYNRIKSL 559
+LEDGRLTD +GR VDFKNT+LI TSN+G+S I K +GF + + D+ Y+R+K+
Sbjct: 660 VLEDGRLTDGQGRIVDFKNTVLIFTSNLGTSDISK-AVGLGFSGSSETDSDAQYDRMKNK 718
Query: 560 VTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFR 619
V +ELK++FRPEFLNR+DE++VF QLTK ++ ++ D+++ V + L KD+ +++TE+ +
Sbjct: 719 VHDELKKHFRPEFLNRIDEIVVFHQLTKDQIVQMVDLLIGRVSNALAEKDMSIELTEKAK 778
Query: 620 ERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVD 668
+ + G++P GARPLRR I R +ED M+EK+L EI G+ V VDV+
Sbjct: 779 DLLANRGFDPVLGARPLRRTIQREIEDQMSEKILFGEIGAGEIVTVDVE 827
>gi|23336357|ref|ZP_00121578.1| COG0542: ATPases with chaperone activity, ATP-binding subunit
[Bifidobacterium longum DJO10A]
gi|189438873|ref|YP_001953954.1| ATP-binding subunit of Clp protease [Bifidobacterium longum DJO10A]
gi|227546736|ref|ZP_03976785.1| ATP-dependent protease, ATPase subunit [Bifidobacterium longum
subsp. longum ATCC 55813]
gi|239620712|ref|ZP_04663743.1| ClpC [Bifidobacterium longum subsp. infantis CCUG 52486]
gi|317481706|ref|ZP_07940738.1| ATPase [Bifidobacterium sp. 12_1_47BFAA]
gi|322689668|ref|YP_004209402.1| Clp protease [Bifidobacterium longum subsp. infantis 157F]
gi|322691629|ref|YP_004221199.1| Clp protease [Bifidobacterium longum subsp. longum JCM 1217]
gi|419847456|ref|ZP_14370628.1| Clp amino terminal domain protein [Bifidobacterium longum subsp.
longum 1-6B]
gi|419850517|ref|ZP_14373505.1| Clp amino terminal domain protein [Bifidobacterium longum subsp.
longum 35B]
gi|419852605|ref|ZP_14375472.1| Clp amino terminal domain protein [Bifidobacterium longum subsp.
longum 2-2B]
gi|419855456|ref|ZP_14378213.1| Clp amino terminal domain protein [Bifidobacterium longum subsp.
longum 44B]
gi|189427308|gb|ACD97456.1| ATP-binding subunit of Clp protease [Bifidobacterium longum DJO10A]
gi|227212698|gb|EEI80579.1| ATP-dependent protease, ATPase subunit [Bifidobacterium longum
subsp. infantis ATCC 55813]
gi|239516288|gb|EEQ56155.1| ClpC [Bifidobacterium longum subsp. infantis CCUG 52486]
gi|291516227|emb|CBK69843.1| ATPases with chaperone activity, ATP-binding subunit
[Bifidobacterium longum subsp. longum F8]
gi|316916820|gb|EFV38210.1| ATPase [Bifidobacterium sp. 12_1_47BFAA]
gi|320456485|dbj|BAJ67107.1| Clp protease [Bifidobacterium longum subsp. longum JCM 1217]
gi|320461004|dbj|BAJ71624.1| Clp protease [Bifidobacterium longum subsp. infantis 157F]
gi|386408907|gb|EIJ23792.1| Clp amino terminal domain protein [Bifidobacterium longum subsp.
longum 35B]
gi|386410285|gb|EIJ25079.1| Clp amino terminal domain protein [Bifidobacterium longum subsp.
longum 2-2B]
gi|386411010|gb|EIJ25774.1| Clp amino terminal domain protein [Bifidobacterium longum subsp.
longum 1-6B]
gi|386415546|gb|EIJ30075.1| Clp amino terminal domain protein [Bifidobacterium longum subsp.
longum 44B]
Length = 869
Score = 773 bits (1995), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/664 (57%), Positives = 519/664 (78%), Gaps = 8/664 (1%)
Query: 8 AVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPC 67
A GV + + L+++G NLT A EGKLDPV+GR +IERV+ +L RRTKNNP
Sbjct: 158 ANAGGVTDKQNKSGSAILDQFGRNLTAEAAEGKLDPVIGRTNEIERVMVVLSRRTKNNPV 217
Query: 68 LIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLM 127
LIGEPGVGKTA+ EGLAQ+I +GDVP+T++GK+V +LD+G +VAG++YRG+FEERLKK++
Sbjct: 218 LIGEPGVGKTAVVEGLAQKIQAGDVPETLKGKQVYSLDLGSMVAGSRYRGDFEERLKKVL 277
Query: 128 EEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIE 187
+EIK +I+LFIDE+HT++GAG+A+GA+ A+++LKP LARGELQ IGATT DEYRK+IE
Sbjct: 278 KEIKTRGDIVLFIDEIHTIVGAGSADGALGASDMLKPMLARGELQTIGATTTDEYRKYIE 337
Query: 188 KDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDR 247
KD ALERRFQP++V EP++ ETI+ILKGLR RYE HH + TD AL SAA+LS +YI DR
Sbjct: 338 KDAALERRFQPIQVHEPTIAETIEILKGLRSRYENHHHVTITDGALQSAAELSSRYIQDR 397
Query: 248 FLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDR 307
LPDKAIDLIDEAG+R+R++ P E +EL++++ +I +K+EA++GQDFEKA ELRD+
Sbjct: 398 NLPDKAIDLIDEAGARLRIKRLTAPPELKELDEKIAKIAADKDEAIKGQDFEKAAELRDK 457
Query: 308 EMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRL 367
+ L+A K KE S E E+ DV VV E I ++S+ TGIPV K++ ES +L
Sbjct: 458 QEKLEAD-----RKQKEDSWREGES-DVKMVVDEDVIAEVISSTTGIPVFKLTQAESKKL 511
Query: 368 LKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALA 427
L ME LHKR+IGQDEAV A+SR+IRR RVGLK+P RP SFIF+GPTGVGK+ELAK LA
Sbjct: 512 LNMEAELHKRIIGQDEAVSALSRSIRRTRVGLKDPKRPSGSFIFAGPTGVGKTELAKTLA 571
Query: 428 AYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEI 487
+ F E+A+IR+DMSEF E++ S+L G+PPGYVGY EGG+LTE VRR+P++VVLFDEI
Sbjct: 572 EFLFDDEDALIRVDMSEFSEKYAASRLFGAPPGYVGYEEGGELTEKVRRKPFSVVLFDEI 631
Query: 488 EKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYD 547
EKAHPD+FN +LQ+L+DG LTD +GR VDFKNT++I+T+N+G+ I K GF+L +
Sbjct: 632 EKAHPDIFNTLLQVLDDGHLTDGQGRKVDFKNTIIILTTNLGTRDIAKAA-NTGFNLGAN 690
Query: 548 EKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKT 607
+SSY R+K V+ ELKQ FRPEFLNRLD++IVF+QLT+ +V++I D+ +K++ DRL
Sbjct: 691 -NESSYQRMKDQVSSELKQQFRPEFLNRLDDIIVFKQLTEPQVRQIVDLDVKQLNDRLFD 749
Query: 608 KDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDV 667
+ + L++T+ ++ + ++G++P GARPLRR I R +ED+++EK+L ++++G VIVD
Sbjct: 750 RHMSLELTDAAKDLLAQKGFDPLLGARPLRRVIQRDIEDAISEKILMGDLEDGQRVIVDA 809
Query: 668 DSDG 671
+ +G
Sbjct: 810 EGEG 813
>gi|312132327|ref|YP_003999666.1| clpa1 [Bifidobacterium longum subsp. longum BBMN68]
gi|311773667|gb|ADQ03155.1| ClpA1 [Bifidobacterium longum subsp. longum BBMN68]
Length = 869
Score = 773 bits (1995), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/664 (57%), Positives = 519/664 (78%), Gaps = 8/664 (1%)
Query: 8 AVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPC 67
A GV + + L+++G NLT A EGKLDPV+GR +IERV+ +L RRTKNNP
Sbjct: 158 ANAGGVTDKQNKSGSAILDQFGRNLTAEAAEGKLDPVIGRTNEIERVMVVLSRRTKNNPV 217
Query: 68 LIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLM 127
LIGEPGVGKTA+ EGLAQ+I +GDVP+T++GK+V +LD+G +VAG++YRG+FEERLKK++
Sbjct: 218 LIGEPGVGKTAVVEGLAQKIQAGDVPETLKGKQVYSLDLGSMVAGSRYRGDFEERLKKVL 277
Query: 128 EEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIE 187
+EIK +I+LFIDE+HT++GAG+A+GA+ A+++LKP LARGELQ IGATT DEYRK+IE
Sbjct: 278 KEIKTRGDIVLFIDEIHTIVGAGSADGALGASDMLKPMLARGELQTIGATTTDEYRKYIE 337
Query: 188 KDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDR 247
KD ALERRFQP++V EP++ ETI+ILKGLR RYE HH + TD AL SAA+LS +YI DR
Sbjct: 338 KDAALERRFQPIQVHEPTIAETIEILKGLRSRYENHHHVTITDGALQSAAELSSRYIQDR 397
Query: 248 FLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDR 307
LPDKAIDLIDEAG+R+R++ P E +EL++++ +I +K+EA++GQDFEKA ELRD+
Sbjct: 398 NLPDKAIDLIDEAGARLRIKRLTAPPELKELDEKIAKIAADKDEAIKGQDFEKAAELRDK 457
Query: 308 EMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRL 367
+ L+A K KE S E E+ DV VV E I ++S+ TGIPV K++ ES +L
Sbjct: 458 QEKLEAD-----RKQKEDSWREGES-DVKMVVDEDVIAEVISSTTGIPVFKLTQAESKKL 511
Query: 368 LKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALA 427
L ME LHKR+IGQDEAV A+SR+IRR RVGLK+P RP SFIF+GPTGVGK+ELAK LA
Sbjct: 512 LNMEAELHKRIIGQDEAVSALSRSIRRTRVGLKDPKRPSGSFIFAGPTGVGKTELAKTLA 571
Query: 428 AYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEI 487
+ F E+A+IR+DMSEF E++ S+L G+PPGYVGY EGG+LTE VRR+P++VVLFDEI
Sbjct: 572 EFLFDDEDALIRVDMSEFSEKYAASRLFGAPPGYVGYEEGGELTEKVRRKPFSVVLFDEI 631
Query: 488 EKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYD 547
EKAHPD+FN +LQ+L+DG LTD +GR VDFKNT++I+T+N+G+ I K GF+L +
Sbjct: 632 EKAHPDIFNTLLQVLDDGHLTDGQGRKVDFKNTIIILTTNLGTRDIAKAA-NTGFNLGAN 690
Query: 548 EKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKT 607
+SSY R+K V+ ELKQ FRPEFLNRLD++IVF+QLT+ +V++I D+ +K++ DRL
Sbjct: 691 -NESSYQRMKDQVSSELKQQFRPEFLNRLDDIIVFKQLTEPQVRQIVDLDVKQLNDRLFD 749
Query: 608 KDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDV 667
+ + L++T+ ++ + ++G++P GARPLRR I R +ED+++EK+L ++++G VIVD
Sbjct: 750 RHMSLELTDAAKDLLAQKGFDPLLGARPLRRVIQRDIEDAISEKILMGDLEDGQRVIVDA 809
Query: 668 DSDG 671
+ +G
Sbjct: 810 EGEG 813
>gi|225352751|ref|ZP_03743774.1| hypothetical protein BIFPSEUDO_04381 [Bifidobacterium
pseudocatenulatum DSM 20438 = JCM 1200]
gi|225156358|gb|EEG69927.1| hypothetical protein BIFPSEUDO_04381 [Bifidobacterium
pseudocatenulatum DSM 20438 = JCM 1200]
Length = 861
Score = 773 bits (1995), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/665 (57%), Positives = 519/665 (78%), Gaps = 11/665 (1%)
Query: 25 LEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLA 84
L+++G NLT A GKLDPV+GR +IERV+ +L RRTKNNP LIGEPGVGKTA+ EGLA
Sbjct: 175 LDQFGRNLTAEAAAGKLDPVIGRSSEIERVMVVLSRRTKNNPVLIGEPGVGKTAVVEGLA 234
Query: 85 QRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVH 144
Q+I +GDVP+T++GK+V +LD+G +VAG++YRG+FEERLKK+++EIK +I+LFIDE+H
Sbjct: 235 QKINAGDVPETLKGKQVYSLDLGSMVAGSRYRGDFEERLKKVLKEIKTRGDIVLFIDEIH 294
Query: 145 TLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEP 204
T++GAG+A+GA+ A+++LKP LARGELQ IGATT DEYRK+IEKD ALERRFQP++V EP
Sbjct: 295 TIVGAGSADGALGASDMLKPMLARGELQTIGATTTDEYRKYIEKDAALERRFQPIQVHEP 354
Query: 205 SVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRV 264
S+ ETI+ILKGLR RYE HH + TD AL +AA LS +YI DR LPDKAIDLIDEAG+R+
Sbjct: 355 SIAETIEILKGLRSRYENHHHVTITDGALQAAADLSSRYIQDRHLPDKAIDLIDEAGARL 414
Query: 265 RLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKE 324
R+R P E +EL+ ++ ++ +EK++A++GQDFEKA ELRD++ L+A+ K KE
Sbjct: 415 RIRRLTAPPELKELDTKIAKLAEEKDQAIKGQDFEKAAELRDKQEKLEAE-----RKQKE 469
Query: 325 MSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEA 384
S E E+ DV VV E I ++S TGIPV K++ ES +L+ ME LHKR+IGQDEA
Sbjct: 470 SSWREGES-DVKMVVDEDVIAEVISQTTGIPVFKLTQAESKKLMTMESELHKRIIGQDEA 528
Query: 385 VKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSE 444
V A+SR+IRRARVGLK+P RP SFIF+GPTGVGK+ELAK LA + F E+A+IR+DMSE
Sbjct: 529 VSALSRSIRRARVGLKDPKRPSGSFIFAGPTGVGKTELAKTLAEFLFDDEDALIRVDMSE 588
Query: 445 FMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILED 504
F E++ S+L G+PPGYVGY EGG+LTE VRR+P++VVLFDEIEKAHPD+FN +LQ+L+D
Sbjct: 589 FSEKYAASRLFGAPPGYVGYEEGGELTEKVRRKPFSVVLFDEIEKAHPDIFNTLLQVLDD 648
Query: 505 GRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEEL 564
G LTD +GR VDFKNT++I+T+N+G+ I K GF+L + +SSY R+K V+ EL
Sbjct: 649 GHLTDGQGRKVDFKNTIIILTTNLGTRDIAKAA-NTGFNLGAN-TESSYQRMKDQVSAEL 706
Query: 565 KQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVE 624
KQ FRPEFLNRLD++IVF+QLT+ +V++I D+ +K++ DRL + + L++T+ ++ + +
Sbjct: 707 KQQFRPEFLNRLDDIIVFKQLTEPQVRQIVDLDVKQLNDRLFDRHMSLELTDAAKDLLAQ 766
Query: 625 EGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNGSSGAPE 684
+G++P GARPLRR I R +ED+++EK+L E+++G V VD + +G +L + E
Sbjct: 767 KGFDPLLGARPLRRVIQRDVEDAISEKILMGELEDGQRVKVDAEGEG---ILGEFTFTGE 823
Query: 685 SLADP 689
+ DP
Sbjct: 824 AFEDP 828
>gi|313893296|ref|ZP_07826871.1| negative regulator of genetic competence ClpC/MecB [Veillonella sp.
oral taxon 158 str. F0412]
gi|313442192|gb|EFR60609.1| negative regulator of genetic competence ClpC/MecB [Veillonella sp.
oral taxon 158 str. F0412]
Length = 815
Score = 773 bits (1995), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 373/675 (55%), Positives = 515/675 (76%), Gaps = 16/675 (2%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
++G +++ G G + ++ L ++ T+L + A++GK+DPV+GR +I+RV+QIL R
Sbjct: 140 ILGSNSKGHNDGQEGPNGDGELGDLSDFATDLNEYAKQGKIDPVIGRDTEIQRVIQILSR 199
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNP LIGEPGVGKTAIAEGLAQRI +G+VP+ + K++I+L +G ++AG KYRGEFE
Sbjct: 200 RTKNNPVLIGEPGVGKTAIAEGLAQRIVTGNVPEILRNKRIISLSIGAMLAGAKYRGEFE 259
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
ERLKK ++E++Q D++I+FIDE+HTL+GAGA EGA+DAANILKP+LARGE Q IGATTLD
Sbjct: 260 ERLKKAIDEVQQHDDMIIFIDEIHTLVGAGATEGAMDAANILKPALARGEFQVIGATTLD 319
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EY+KHIEKD ALERRFQPV+V EP+ ++ ++ILKGLR+RYE HK + TDEAL +A LS
Sbjct: 320 EYKKHIEKDAALERRFQPVQVGEPNEEDALEILKGLRDRYEAFHKAKITDEALKAAVSLS 379
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
+YI+DRFLPDKAID++DEA S+VR++ + + LE+ L+ + EK AV QDFEK
Sbjct: 380 SRYITDRFLPDKAIDVVDEAASKVRMQVFSTAPDVKALEERLKVVKNEKEAAVTSQDFEK 439
Query: 301 AGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVS 360
A +LRD E L IS + A E D VVTE DI +V+ WTGIPV K++
Sbjct: 440 AAKLRDEEKTLVKDIS-------DKKSAAKEESDQKLVVTEDDIAAVVAQWTGIPVAKIA 492
Query: 361 TDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 420
ES+ LL +E+ LHKRV+GQD+AV A+++A+RRAR GLK+P RPI SF+F GPTGVGK+
Sbjct: 493 EAESETLLHLEKELHKRVVGQDDAVTAVAKAVRRARAGLKDPKRPIGSFLFLGPTGVGKT 552
Query: 421 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 480
ELA+ALA+ FG E AMIRLDMSE+ME+HTVS+L+G+PPGYVGY EGGQLT+AVRR+PY+
Sbjct: 553 ELARALASSLFGDESAMIRLDMSEYMEKHTVSRLVGAPPGYVGYEEGGQLTDAVRRKPYS 612
Query: 481 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI 540
V+L DE+EKAH D FN++LQ+L+DGRLTDS+GRTVDF+NT++IMTSN+G+ + K +
Sbjct: 613 VILLDEVEKAHADFFNILLQVLDDGRLTDSQGRTVDFRNTVIIMTSNLGAKALHKNSPEL 672
Query: 541 GFDLDYDEKDSSYNRIKSL--------VTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKE 592
GF L + +SS N+ S+ V + +K++FRPEFLNR+DEMIVF+ LT+ ++++
Sbjct: 673 GF-LAPKKSESSINQSNSIDFKEAKKSVMDAVKRHFRPEFLNRIDEMIVFQPLTEEDLQQ 731
Query: 593 IADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKM 652
I I++ +V RLK ++++L++T + +V+EG + + GARPL+RAI RL+ED +++ +
Sbjct: 732 IVSILMSDVTKRLKERELQLEITAEAMQLLVKEGSDFTMGARPLKRAIQRLIEDPVSDLI 791
Query: 653 LAREIKEGDSVIVDV 667
L + EG ++ DV
Sbjct: 792 LKGDATEGKTIKADV 806
>gi|187934389|ref|YP_001884443.1| negative regulator of genetic competence ClpC/mecB [Clostridium
botulinum B str. Eklund 17B]
gi|187722542|gb|ACD23763.1| negative regulator of genetic competence MecB/ClpC [Clostridium
botulinum B str. Eklund 17B]
Length = 814
Score = 772 bits (1994), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/657 (57%), Positives = 508/657 (77%), Gaps = 8/657 (1%)
Query: 17 SSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGK 76
S K P L++YG +LT+ A +G LDPV+GR + +RV++IL RR KNNPCLIGEPGVGK
Sbjct: 161 SEKTKTPMLDKYGRDLTQFARDGGLDPVIGRDLENQRVLEILCRRIKNNPCLIGEPGVGK 220
Query: 77 TAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEI 136
TA+ EGLAQRI G++P+ + GK++++LD+ L+AG KYRGEFE+RLKK+M EI++ I
Sbjct: 221 TAVIEGLAQRIVEGNIPEILRGKRIVSLDLTALLAGAKYRGEFEDRLKKVMLEIEKDKSI 280
Query: 137 ILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRF 196
I+FIDE+HT+IGAGAAEGAIDA+NILKP+L+RGE+QCIGATT++EYRKHIEKD ALERRF
Sbjct: 281 IIFIDEIHTIIGAGAAEGAIDASNILKPALSRGEIQCIGATTINEYRKHIEKDSALERRF 340
Query: 197 QPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDL 256
QPV V EPS DET+ IL+GLRE+YE HH + TD+AL +A +LS +YI+DRF+PDKAIDL
Sbjct: 341 QPVNVGEPSKDETLIILRGLREKYEEHHNVNITDKALEAAVELSDRYITDRFMPDKAIDL 400
Query: 257 IDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQIS 316
IDEA ++VR+++ P + +E E+++ TKEK E +R QDFEKA +RD E DLK ++
Sbjct: 401 IDEACAKVRIKNLIPPANLKSMEDEIKETTKEKEECIRVQDFEKAANMRDIENDLKEELE 460
Query: 317 ALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHK 376
AL KE S + V E DI +VS+WT IP +K++ ES++LLK+E L K
Sbjct: 461 AL---RKEWSDKNSNK---QLNVDEEDIAEVVSSWTKIPAKKLTEKESEKLLKLENILQK 514
Query: 377 RVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEA 436
RVIGQ EAV++I++A+RRARVG+K+PNRPI +FIF GPTGVGK+EL+KALA FG E +
Sbjct: 515 RVIGQTEAVESIAKAVRRARVGIKDPNRPIGTFIFLGPTGVGKTELSKALAETMFGDENS 574
Query: 437 MIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFN 496
+IR+DMSE+ME ++VSKLIGSPPGYVGY +GGQLTEAVRR+PY+VVL DEIEKAH DVFN
Sbjct: 575 IIRIDMSEYMESNSVSKLIGSPPGYVGYDDGGQLTEAVRRKPYSVVLLDEIEKAHQDVFN 634
Query: 497 MMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRI 556
++LQI+EDGRLTDS G+ V+FKNT++IMTSNVG+ I+K + IGF+ DE +S Y ++
Sbjct: 635 ILLQIMEDGRLTDSHGKVVNFKNTIVIMTSNVGAHQIKK-QKTIGFNTSIDE-NSEYEKM 692
Query: 557 KSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTE 616
K V EELK+ F+PEFLNR+D+ IVF +L + ++ +I D+MLK + RL+ KDI L +
Sbjct: 693 KDNVLEELKRSFKPEFLNRIDDTIVFHKLKEDDLLDIVDLMLKSITKRLENKDIHLNFEK 752
Query: 617 RFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNV 673
++ ++ + + +YGARPLRR I + +ED ++E++L IK GD + V+ D V
Sbjct: 753 DSKKFLINKRIDLNYGARPLRRIITKEVEDKLSEEILLGNIKIGDRIKVNESKDNLV 809
>gi|283457250|ref|YP_003361820.1| ATPase [Rothia mucilaginosa DY-18]
gi|283133235|dbj|BAI64000.1| ATPase with chaperone activity, ATP-binding subunit [Rothia
mucilaginosa DY-18]
Length = 856
Score = 772 bits (1994), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/689 (56%), Positives = 520/689 (75%), Gaps = 17/689 (2%)
Query: 5 STEAVGAGVGGGSSGNKMPT----LEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
S E AGVG G+S P L+++G NLT A EG+LDPV+GR ++ERV+Q+L R
Sbjct: 150 SGEKETAGVGAGNSREGTPAGSTILDQFGRNLTAAAREGELDPVIGRHKEMERVMQVLSR 209
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNP LIGEPGVGKTA+ EGLAQ I GDVP+T++ K + TLD+G LVAG++YRG+FE
Sbjct: 210 RTKNNPVLIGEPGVGKTAVVEGLAQAIVHGDVPETLKDKHLYTLDLGSLVAGSRYRGDFE 269
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
ERLKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLD
Sbjct: 270 ERLKKVLKEIRSRGDIILFIDEIHTLVGAGAAEGAIDAASILKPMLARGELQTIGATTLD 329
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRKHIEKD ALERRFQP++V EPS + +QILKG+R++YE HH++ TDEA+ +A L+
Sbjct: 330 EYRKHIEKDAALERRFQPIQVEEPSQELAVQILKGVRDKYEAHHRVTITDEAIETAVNLA 389
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
+YISDRFLPDKA+DLIDEAG+R+R++ P E + L+++ ++ ++K +A+ QD+EK
Sbjct: 390 ARYISDRFLPDKAVDLIDEAGARLRIKRMTAPPEIKLLDEKAAKLRQQKEDAINSQDYEK 449
Query: 301 AGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVS 360
A LRD+E + A+ +E KA E GD VT I +++A TG+PV K++
Sbjct: 450 AAGLRDQEQKVLAE-------KEEAEKAWREGGDAFGTVTPEVIAEVLAASTGVPVYKIT 502
Query: 361 TDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 420
+ES RLL ME+ LHKRVIGQ+ A+ A+SRAIRR R GLK+P RP SFIF+GPTGVGK+
Sbjct: 503 EEESTRLLTMEQELHKRVIGQEHAIAALSRAIRRTRAGLKDPRRPGGSFIFAGPTGVGKT 562
Query: 421 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 480
ELAKALA + FG E+++I LDMSE+ E+HTVS+L G+PPGYVGY EGGQLTE VRR+P++
Sbjct: 563 ELAKALAEFLFGDEDSLITLDMSEYQEKHTVSRLFGAPPGYVGYDEGGQLTEKVRRKPFS 622
Query: 481 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI 540
VVLFDE+EKAH D+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N+GS + RRI
Sbjct: 623 VVLFDEVEKAHADLFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNLGSRDV---NRRI 679
Query: 541 --GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIML 598
GF D+ + Y R+++ V E LK++FRPEFLNR+D++IVF QL++ E+ +I D+ +
Sbjct: 680 PVGFQA-MDDTAADYERMQARVMENLKEHFRPEFLNRVDDIIVFPQLSESEILQIVDLFV 738
Query: 599 KEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIK 658
+ RL +D+ +++T + + +GY+PS GARPLRR + R +ED+++EK+L +IK
Sbjct: 739 GRLAKRLAEQDMSIELTNAAKVLMAAKGYDPSMGARPLRREMQRNIEDALSEKILFGDIK 798
Query: 659 EGDSVIVDVDSDGNVTVLNGSSGAPESLA 687
G+ + VDV+ +G+ SS + LA
Sbjct: 799 PGEKITVDVEGEGDSAKFVFSSQPMKELA 827
>gi|381163390|ref|ZP_09872620.1| ATPase with chaperone activity, ATP-binding subunit
[Saccharomonospora azurea NA-128]
gi|418462066|ref|ZP_13033124.1| ATPase with chaperone activity, ATP-binding subunit
[Saccharomonospora azurea SZMC 14600]
gi|359737814|gb|EHK86734.1| ATPase with chaperone activity, ATP-binding subunit
[Saccharomonospora azurea SZMC 14600]
gi|379255295|gb|EHY89221.1| ATPase with chaperone activity, ATP-binding subunit
[Saccharomonospora azurea NA-128]
Length = 849
Score = 772 bits (1994), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/669 (57%), Positives = 516/669 (77%), Gaps = 15/669 (2%)
Query: 3 GESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRT 62
G+ GAG G G+ + + L+++G NLT A E KLDPV+GR +IERV+Q+L RRT
Sbjct: 147 GKEPAEAGAGRGEGTPSSSL-VLDQFGRNLTAAARENKLDPVIGRNKEIERVMQVLSRRT 205
Query: 63 KNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEER 122
KNNP LIGEPGVGKTA+ EGLAQ I G+VP+T++ K++ TLD+G LVAG++YRG+FEER
Sbjct: 206 KNNPVLIGEPGVGKTAVVEGLAQNIVKGEVPETLKDKQLYTLDLGSLVAGSRYRGDFEER 265
Query: 123 LKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEY 182
LKK+++EIK +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTL+EY
Sbjct: 266 LKKVLKEIKTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIGATTLEEY 325
Query: 183 RKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQ 242
RK+IEKD ALERRFQP++V EPS++ TI+ILKGLR+RYE HH++ TD ALV+AA L+ +
Sbjct: 326 RKYIEKDAALERRFQPIQVGEPSLEHTIEILKGLRDRYEAHHRVSITDSALVAAATLADR 385
Query: 243 YISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAG 302
YI+DR+LPDKAIDLIDEAG+R+R+R P + RE ++++ + +EK A+ QDFE+A
Sbjct: 386 YINDRYLPDKAIDLIDEAGARMRIRRMTAPPDLREFDEKIADVRREKESAIDAQDFERAA 445
Query: 303 ELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKV 359
LRD E L Q S + K+ GD+ VV EVD I +++ WTGIPV K+
Sbjct: 446 RLRDEEKTLLGQKSEREKQWKD--------GDL-DVVAEVDDEQIAEVLANWTGIPVFKL 496
Query: 360 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 419
+ +E+ RLL+ME+ LHKR+IGQ++AVKA+S+AIRR R GLK+P RP SFIF+GP+GVGK
Sbjct: 497 TEEETTRLLRMEDELHKRIIGQEDAVKAVSQAIRRTRAGLKDPKRPSGSFIFAGPSGVGK 556
Query: 420 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 479
+EL+KALA + FG ++A+I++DM EF +R+T S+L G+PPGYVGY EGGQLTE VRR+P+
Sbjct: 557 TELSKALANFLFGEDDALIQIDMGEFHDRYTASRLFGAPPGYVGYEEGGQLTEKVRRKPF 616
Query: 480 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 539
+VVLFDEIEKAH +++N +LQ+LEDGRLTD +GRTVDFKNT+LI TSN+G+ I K
Sbjct: 617 SVVLFDEIEKAHQEIYNTLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGTQDISK-SVS 675
Query: 540 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 599
+GF DE Y ++K V EE+K++FRPEFLNR+D++IVF QLT+ ++ ++ D+M
Sbjct: 676 LGFSSGSDET-GRYEKMKQKVNEEMKKHFRPEFLNRIDDIIVFHQLTQEQIIQMVDLMAS 734
Query: 600 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 659
V ++LK KD+ L++T+R + + + G++P GARPLRR I R +ED ++EK+L E++
Sbjct: 735 RVEEQLKAKDMALELTDRAKALLAKRGFDPVLGARPLRRTIQREIEDQLSEKILFGEVQA 794
Query: 660 GDSVIVDVD 668
G +IVDV+
Sbjct: 795 GQIIIVDVE 803
>gi|427390984|ref|ZP_18885390.1| hypothetical protein HMPREF9233_00893 [Actinobaculum massiliae
ACS-171-V-Col2]
gi|425732322|gb|EKU95132.1| hypothetical protein HMPREF9233_00893 [Actinobaculum massiliae
ACS-171-V-Col2]
Length = 866
Score = 772 bits (1994), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 384/647 (59%), Positives = 508/647 (78%), Gaps = 10/647 (1%)
Query: 25 LEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLA 84
L++YG NLT+ A + KLDPV+GR + ERV+Q+L RRTKNNP LIGEPGVGKTA+ EGL+
Sbjct: 168 LDQYGRNLTQAARDHKLDPVIGRHTETERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLS 227
Query: 85 QRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVH 144
Q IA+ +VP+T++GK++ +LDMG LVAG++YRG+FEER+KK+++EI +IILFIDE+H
Sbjct: 228 QMIAADNVPETLKGKQLYSLDMGSLVAGSRYRGDFEERMKKILKEINTRGDIILFIDEIH 287
Query: 145 TLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEP 204
TL+GAGAAEGA+DAA++LKP LARGE+Q IGATTLDEYRK+IEKD ALERRFQP++V +P
Sbjct: 288 TLVGAGAAEGALDAASLLKPMLARGEIQVIGATTLDEYRKYIEKDAALERRFQPIQVDQP 347
Query: 205 SVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRV 264
+ ++TI+ILKGLR+RYE +H++ TD+AL +AA LS +YI+DRFLPDKAIDLIDEAG+R+
Sbjct: 348 TAEQTIEILKGLRDRYESYHRVTITDDALEAAATLSERYINDRFLPDKAIDLIDEAGARL 407
Query: 265 RLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKE 324
+R P E REL++++ + K A+ GQDFE+A +LRD E L A+ E
Sbjct: 408 AIRKMTAPPELRELDEKISSTRRAKEAAIDGQDFERAAKLRDEEQSLNAERD-------E 460
Query: 325 MSKAETEAG-DVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDE 383
KA + DV VV E I ++S TGIPV K+S ES++LL+ME+ LHKRVIGQ E
Sbjct: 461 KEKAWKDGDMDVVSVVDEDLITEVLSMSTGIPVFKLSEAESEKLLRMEDELHKRVIGQHE 520
Query: 384 AVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMS 443
AV AIS+AIRR R GLK+PNRP SFIF+GPTGVGK+ELAKALA + FG E A+I LDMS
Sbjct: 521 AVTAISQAIRRQRAGLKDPNRPGGSFIFAGPTGVGKTELAKALAEFLFGDESALITLDMS 580
Query: 444 EFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILE 503
E+ E+HTVS+L G+PPGYVGY EGGQLTEAVRR+P++VVLFDEIEKAH D+FN +LQILE
Sbjct: 581 EYSEKHTVSRLFGAPPGYVGYEEGGQLTEAVRRKPFSVVLFDEIEKAHADLFNSLLQILE 640
Query: 504 DGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEE 563
+GRLTDS+GR VDFKNT++IMT+N+G+ I K G + GF D D +SY R+K V+EE
Sbjct: 641 EGRLTDSQGRVVDFKNTIIIMTTNLGTKDIAK-GVQTGFQFDQDTT-TSYERMKMKVSEE 698
Query: 564 LKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVV 623
LK +FRPEFLNR+D++IVF QL + E+ +I D+M+ ++ RL+ + + + +T+ +E +
Sbjct: 699 LKSHFRPEFLNRVDDVIVFPQLGRDEILQIVDLMIGKLDKRLRGQKLSIALTKDAKELLA 758
Query: 624 EEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSD 670
+ GY+P GARPLRRAI R +ED ++EK+L E ++G ++VDVD +
Sbjct: 759 DRGYDPVLGARPLRRAIQRDIEDVLSEKLLYGEFEDGQVIVVDVDKN 805
>gi|383782938|ref|YP_005467505.1| putative ATPase associated with various cellular activities
[Actinoplanes missouriensis 431]
gi|381376171|dbj|BAL92989.1| putative ATPase associated with various cellular activities
[Actinoplanes missouriensis 431]
Length = 840
Score = 772 bits (1994), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/650 (59%), Positives = 515/650 (79%), Gaps = 14/650 (2%)
Query: 24 TLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGL 83
L+++G NLT+ A EGKLDPV+GR+ +IERV+Q+L RRTKNNP LIGEPGVGKTA+ EGL
Sbjct: 167 VLDQFGRNLTQAAREGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGL 226
Query: 84 AQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEV 143
+Q I G+VP+T++ K++ TLD+G LVAG++YRG+FEERLKK+++EI+ +IILFIDE+
Sbjct: 227 SQSIVKGEVPETLKDKQLYTLDLGALVAGSRYRGDFEERLKKVLKEIRTRGDIILFIDEI 286
Query: 144 HTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPE 203
HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEYRKH+EKD ALERRFQP++V E
Sbjct: 287 HTLVGAGAAEGAIDAASILKPMLARGELQTIGATTLDEYRKHLEKDAALERRFQPIQVGE 346
Query: 204 PSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSR 263
PS+ TI+ILKGLR+RYE HH++ TD ALV+AA L+ +YISDRFLPDKAIDLIDEAG+R
Sbjct: 347 PSLAHTIEILKGLRDRYEAHHRISITDAALVAAATLADRYISDRFLPDKAIDLIDEAGAR 406
Query: 264 VRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGK 323
+R+R P + R+ ++ + Q+ ++K A+ QDFE+A +LRD+E L Q K
Sbjct: 407 MRIRRMTAPPDLRDFDERIAQVRRDKESAIDAQDFERAAQLRDKEKTLLNQ--------K 458
Query: 324 EMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIG 380
+ E +AGD+ VV+EVD I ++ WTGIPV K++ +E+ RLL+ME+ LHKRVIG
Sbjct: 459 AQREKEWKAGDL-DVVSEVDDEQIAEVLGNWTGIPVYKLTEEETSRLLRMEDELHKRVIG 517
Query: 381 QDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRL 440
Q++AV+A+S+AIRR R GLK+P RP SFIF+GP+GVGK+EL+KALA + FGSE+A+I+L
Sbjct: 518 QEDAVQAVSKAIRRTRAGLKDPKRPSGSFIFAGPSGVGKTELSKALAEFLFGSEDALIQL 577
Query: 441 DMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQ 500
DMSEF +R+TVS+L+G+PPGYVGY EGGQLTE VRR+P++VVLFDEIEKAHPDVFN +LQ
Sbjct: 578 DMSEFHDRYTVSRLVGAPPGYVGYDEGGQLTEKVRRKPFSVVLFDEIEKAHPDVFNTLLQ 637
Query: 501 ILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLV 560
ILEDGRLTD +GR VDFKNT++I+T+N+G+ + K +GF E +SSY R+K V
Sbjct: 638 ILEDGRLTDGQGRIVDFKNTVIILTTNLGTRDVAK-AVSLGFQASEAE-ESSYERMKIKV 695
Query: 561 TEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRE 620
+ELKQ+FRPEFLNR+D+ IVF QL + E+ +I DI + +LK KD+ L++T+ ++
Sbjct: 696 NDELKQHFRPEFLNRIDDTIVFHQLREKEILQIVDIFTARIEGQLKNKDMGLELTDNAKK 755
Query: 621 RVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSD 670
+ +G++P GARPLRR I R LED+++E++L E++ G V+VD + D
Sbjct: 756 YLAAKGFDPVLGARPLRRTIQRELEDTLSEQILFNELRPGQIVVVDCEGD 805
>gi|171743328|ref|ZP_02919135.1| hypothetical protein BIFDEN_02459 [Bifidobacterium dentium ATCC
27678]
gi|171278942|gb|EDT46603.1| ATPase family associated with various cellular activities (AAA)
[Bifidobacterium dentium ATCC 27678]
Length = 863
Score = 772 bits (1993), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/666 (57%), Positives = 522/666 (78%), Gaps = 11/666 (1%)
Query: 25 LEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLA 84
L+++G NLT A GKLDPV+GR +IERV+ +L RRTKNNP LIGEPGVGKTA+ EGLA
Sbjct: 175 LDQFGRNLTAEAASGKLDPVIGRSSEIERVMVVLSRRTKNNPVLIGEPGVGKTAVVEGLA 234
Query: 85 QRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVH 144
Q+I +GDVP+T++GK+V +LD+G +VAG++YRG+FEERLKK+++EIK +I+LFIDE+H
Sbjct: 235 QKINAGDVPETLKGKQVYSLDLGSMVAGSRYRGDFEERLKKVLKEIKTRGDIVLFIDEIH 294
Query: 145 TLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEP 204
T++GAG+A+GA+ A+++LKP LARGELQ IGATT DEYRK+IEKD ALERRFQP++V EP
Sbjct: 295 TIVGAGSADGALGASDMLKPMLARGELQTIGATTTDEYRKYIEKDAALERRFQPIQVHEP 354
Query: 205 SVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRV 264
++ ETI+ILKGLRERYE HH + TD AL SAA+LS +YI DR LPDKAIDLIDEAG+R+
Sbjct: 355 TIAETIEILKGLRERYENHHHVTITDGALQSAAELSSRYIQDRHLPDKAIDLIDEAGARL 414
Query: 265 RLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKE 324
R+R P E +EL+ ++ ++ +EK++A++ QDFEKA ELRDR+ L+A+ K KE
Sbjct: 415 RIRRLTAPPELKELDAKVAKLAEEKDQAIKDQDFEKAAELRDRQEKLEAE-----RKEKE 469
Query: 325 MSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEA 384
S E E+ DV VV E I ++S TGIPV K++ ES +L+ ME LHKR+IGQDEA
Sbjct: 470 SSWREGES-DVKMVVDEDVIAEVISQTTGIPVFKLTQAESKKLMSMESELHKRIIGQDEA 528
Query: 385 VKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSE 444
V A+SR+IRRARVGLK+P RP SFIF+GPTGVGK+ELAK LA + F E+A+IR+DMSE
Sbjct: 529 VSALSRSIRRARVGLKDPKRPSGSFIFAGPTGVGKTELAKTLAEFLFDDEDALIRVDMSE 588
Query: 445 FMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILED 504
F E++ S+L G+PPGYVGY EGG+LTE VRR+P++VVLFDEIEKAHPD+FN +LQ+L+D
Sbjct: 589 FSEKYAASRLFGAPPGYVGYEEGGELTEKVRRKPFSVVLFDEIEKAHPDIFNTLLQVLDD 648
Query: 505 GRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEEL 564
G LTD +GR VDFKNT++I+T+N+G+ I K GF+L + +SSY R+K V+ EL
Sbjct: 649 GHLTDGQGRKVDFKNTIIILTTNLGTRDIAKAA-NTGFNLGTN-TESSYQRMKDQVSSEL 706
Query: 565 KQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVE 624
KQ FRPEFLNRLD++IVF+QLT+ +V++I D+ +K++ DRL + + L++T+ ++ + +
Sbjct: 707 KQQFRPEFLNRLDDIIVFKQLTEPQVRQIVDLDVKQLNDRLFDRHMSLELTDAAKDLLAQ 766
Query: 625 EGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNGSSGAPE 684
+G++P GARPLRR I R +ED+++EK+L ++++G V VD + +G +L + + E
Sbjct: 767 KGFDPLLGARPLRRVIQRDIEDAISEKILMGDLEDGQRVKVDAEGEG---ILGEFTFSGE 823
Query: 685 SLADPL 690
+ +P+
Sbjct: 824 AFEEPV 829
>gi|374992943|ref|YP_004968442.1| chaperone ATPase [Desulfosporosinus orientis DSM 765]
gi|357211309|gb|AET65927.1| ATPase with chaperone activity, ATP-binding subunit
[Desulfosporosinus orientis DSM 765]
Length = 813
Score = 772 bits (1993), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/657 (59%), Positives = 515/657 (78%), Gaps = 10/657 (1%)
Query: 17 SSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGK 76
S P L E+G +LT A EG+LDPV+GR+ +IERV+Q+L RRTKNNP LIGEPGVGK
Sbjct: 162 SGSVNTPALNEFGRDLTLQAREGRLDPVIGREKEIERVIQVLSRRTKNNPALIGEPGVGK 221
Query: 77 TAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEI 136
TAIAEGLAQ I VP+ + K+VITLD+ +VAG+KYRGEFEERLKK+MEEI+ I
Sbjct: 222 TAIAEGLAQGIVGNRVPEILSNKRVITLDLSAMVAGSKYRGEFEERLKKVMEEIRADGNI 281
Query: 137 ILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRF 196
ILFIDE+HTLIGAGAAEGAIDAANILKP+LARGELQCIGATTL+EYRK+IEKD ALERRF
Sbjct: 282 ILFIDELHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLEEYRKYIEKDSALERRF 341
Query: 197 QPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDL 256
QP+ V EP+V+E I IL+GLR+RYE HH+++ TDEA+ +AA+LS +YISDRFLPDKAIDL
Sbjct: 342 QPISVGEPTVEEAIVILRGLRDRYEAHHRIKITDEAIEAAARLSDRYISDRFLPDKAIDL 401
Query: 257 IDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQIS 316
+DEA SRVRL P + ++LE+E ++ KEK AV Q+FEKA E RD+E ++A+++
Sbjct: 402 MDEAASRVRLASFTAPPDLKQLEEEADRLKKEKEAAVSSQEFEKAAEFRDKEQKIRAELA 461
Query: 317 ALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHK 376
+G ++ E +VT DI IV++WTGIPV+K++ +ES+RLL +E+ LH+
Sbjct: 462 E--QRGAWQNQRNKE----NAMVTADDIAQIVASWTGIPVKKLAEEESERLLHLEDLLHQ 515
Query: 377 RVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEA 436
R++GQD+AV A++RA+RRAR GLK+P RPI SFIF GPTGVGK+EL +ALA FG E+A
Sbjct: 516 RLVGQDDAVAAVARAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELGRALAEGMFGDEKA 575
Query: 437 MIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFN 496
+IR+DMSE+ME+H VS+L+G+PPGYVG+ EGGQLTEAVRR+PY+VVL DEIEKAHP+ FN
Sbjct: 576 LIRIDMSEYMEKHAVSRLVGAPPGYVGHDEGGQLTEAVRRKPYSVVLLDEIEKAHPEAFN 635
Query: 497 MMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRI 556
++LQ+LEDGRLTD+KGRTVDF+NT++IMTSNVGSS ++K +GF DEK + Y +
Sbjct: 636 ILLQVLEDGRLTDTKGRTVDFRNTVIIMTSNVGSSFLKKEA--MGFAPKKDEK-TDYKNM 692
Query: 557 KSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTE 616
+ V EELK+ FRPEFLNR+DE++VF L + + +IA I++ +V RL +EL++ +
Sbjct: 693 RGHVMEELKRSFRPEFLNRIDEIVVFHALQEEHLVKIAGILVHQVNKRLSENGLELEIEK 752
Query: 617 RFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNV 673
E + +EG +P +GARPLRRAI RL+ED+++EK+L + K GD + V+ + DG +
Sbjct: 753 SAVELIAKEGNDPIFGARPLRRAIQRLIEDALSEKILEGQFKPGDRIRVEAE-DGTM 808
>gi|422324030|ref|ZP_16405067.1| ATP-dependent Clp protease ATP-binding subunit [Rothia mucilaginosa
M508]
gi|353344624|gb|EHB88930.1| ATP-dependent Clp protease ATP-binding subunit [Rothia mucilaginosa
M508]
Length = 855
Score = 772 bits (1993), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/683 (56%), Positives = 518/683 (75%), Gaps = 17/683 (2%)
Query: 11 AGVGGGSSGNKMPT----LEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNP 66
AGVG G+S P L+++G NLT A EG+LDPV+GR ++ERV+Q+L RRTKNNP
Sbjct: 156 AGVGAGNSREGTPAGSTILDQFGRNLTAAAREGELDPVIGRHKEMERVMQVLSRRTKNNP 215
Query: 67 CLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKL 126
LIGEPGVGKTA+ EGLAQ I GDVP+T++ K + TLD+G LVAG++YRG+FEERLKK+
Sbjct: 216 VLIGEPGVGKTAVVEGLAQAIVHGDVPETLKDKHLYTLDLGSLVAGSRYRGDFEERLKKV 275
Query: 127 MEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHI 186
++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEYRKHI
Sbjct: 276 LKEIRSRGDIILFIDEIHTLVGAGAAEGAIDAASILKPMLARGELQTIGATTLDEYRKHI 335
Query: 187 EKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISD 246
EKD ALERRFQP++V EPS + +QILKG+R++YE HH++ TDEA+ +A L+ +YISD
Sbjct: 336 EKDAALERRFQPIQVEEPSQELAVQILKGVRDKYEAHHRVTITDEAIETAVNLAARYISD 395
Query: 247 RFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRD 306
RFLPDKA+DLIDEAG+R+R++ P E + L+++ ++ ++K +A+ QD+EKA LRD
Sbjct: 396 RFLPDKAVDLIDEAGARLRIKRMTAPPEIKLLDEKAAKLRQQKEDAINSQDYEKAAGLRD 455
Query: 307 REMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDR 366
+E + A+ +E KA E GD VT I +++A TG+PV K++ +ES R
Sbjct: 456 QEQKVLAE-------KEEAEKAWREGGDAFGTVTPEVIAEVLAASTGVPVYKITEEESTR 508
Query: 367 LLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKAL 426
LL ME+ LHKRVIGQ+ A+ A+SRAIRR R GLK+P RP SFIF+GPTGVGK+ELAKAL
Sbjct: 509 LLTMEQELHKRVIGQEHAIAALSRAIRRTRAGLKDPRRPGGSFIFAGPTGVGKTELAKAL 568
Query: 427 AAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDE 486
A + FG E+++I LDMSE+ E+HTVS+L G+PPGYVGY EGGQLTE VRR+P++VVLFDE
Sbjct: 569 AEFLFGDEDSLITLDMSEYQEKHTVSRLFGAPPGYVGYDEGGQLTEKVRRKPFSVVLFDE 628
Query: 487 IEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI--GFDL 544
+EKAH D+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N+GS + RRI GF
Sbjct: 629 VEKAHADLFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNLGSRDV---NRRIPVGFQA 685
Query: 545 DYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDR 604
D+ + Y R+++ V E LK++FRPEFLNR+D++IVF QL++ E+ +I D+ + + R
Sbjct: 686 -MDDTAADYERMQARVMENLKEHFRPEFLNRVDDIIVFPQLSESEILQIVDLFVGRLAKR 744
Query: 605 LKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVI 664
L +D+ +++T + + +GY+PS GARPLRR + R +ED+++EK+L +IK G+ +
Sbjct: 745 LAEQDMSIELTNAAKVLMAAKGYDPSMGARPLRREMQRNIEDALSEKILFGDIKPGEKIT 804
Query: 665 VDVDSDGNVTVLNGSSGAPESLA 687
VDV+ +G+ SS + LA
Sbjct: 805 VDVEGEGDSAKFVFSSQPMKELA 827
>gi|312138070|ref|YP_004005406.1| DNA binding ATP-dependent peptidase [Rhodococcus equi 103S]
gi|311887409|emb|CBH46721.1| putative DNA binding ATP-dependent peptidase [Rhodococcus equi
103S]
Length = 851
Score = 772 bits (1993), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/668 (57%), Positives = 516/668 (77%), Gaps = 15/668 (2%)
Query: 4 ESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTK 63
E EA G+ G+ + L+++G NLT+ A EGKLDPV+GR +IERV+Q+L RRTK
Sbjct: 149 EPAEAGGSRGEAGTPSTSL-VLDQFGRNLTQAALEGKLDPVIGRSKEIERVMQVLSRRTK 207
Query: 64 NNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERL 123
NNP LIGEPGVGKTA+ EGLAQ I +G+VP+T++ K++ TLD+G LVAG++YRG+FEERL
Sbjct: 208 NNPVLIGEPGVGKTAVVEGLAQAIVNGEVPETLKDKQLYTLDLGSLVAGSRYRGDFEERL 267
Query: 124 KKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYR 183
KK+++EI +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEYR
Sbjct: 268 KKVLKEINTRGDIILFIDELHTLVGAGAAEGAIDAASILKPKLARGELQTIGATTLDEYR 327
Query: 184 KHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQY 243
K+IEKD ALERRFQPV+V EP+V+ TI+ILKGLR+RYE HH++ TD ALV+AA L+ +Y
Sbjct: 328 KYIEKDAALERRFQPVQVGEPTVEHTIEILKGLRDRYEAHHRVSITDSALVAAATLADRY 387
Query: 244 ISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGE 303
I+DRFLPDKAIDLIDEAG+R+R+R P + RE + ++ +EK A+ QDFEKA
Sbjct: 388 INDRFLPDKAIDLIDEAGARMRIRRMTAPPDLREFDDKIADARREKESAIDAQDFEKAAN 447
Query: 304 LRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKVS 360
LRD+E L AQ + + + +GD+ V+ EVD I ++ WTGIPV K++
Sbjct: 448 LRDKEKTLVAQ--------RAEREKQWRSGDL-DVIAEVDDEQIAEVLGNWTGIPVFKLT 498
Query: 361 TDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 420
+E+ RLL+MEE LHKR+IGQ++AVKA+S+AIRR R GLK+P RP SFIF+GP+GVGK+
Sbjct: 499 EEETTRLLRMEEELHKRIIGQEDAVKAVSKAIRRTRAGLKDPKRPSGSFIFAGPSGVGKT 558
Query: 421 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 480
EL+KALA + FG ++A+I++DM EF +R T S+L G+PPGYVGY EGGQLTE VRR+P++
Sbjct: 559 ELSKALANFLFGEDDALIQIDMGEFHDRFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFS 618
Query: 481 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI 540
VVLFDEIEKAH +++N +LQ+LEDGRLTD +GRTVDFKNT+LI TSN+G+S I K +
Sbjct: 619 VVLFDEIEKAHQEIYNTLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGTSDISK-AVGL 677
Query: 541 GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 600
GF +S+Y R+K V +ELK++FRPEFLNR+D++IVF QL++ E+ E+ D+M+
Sbjct: 678 GFSAGTG-SESNYERMKLKVHDELKKHFRPEFLNRIDDIIVFHQLSQNEIIEMVDLMIGR 736
Query: 601 VFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEG 660
V +LK KD+++++TE+ + + + G++P GARPLRR I R +ED ++EK+L E+ G
Sbjct: 737 VEAQLKNKDMDIELTEQAKSLLAKRGFDPVLGARPLRRTIQREIEDQLSEKILFNELGPG 796
Query: 661 DSVIVDVD 668
V+VDV+
Sbjct: 797 QIVLVDVE 804
>gi|410727947|ref|ZP_11366140.1| ATPase with chaperone activity, ATP-binding subunit [Clostridium
sp. Maddingley MBC34-26]
gi|410597507|gb|EKQ52118.1| ATPase with chaperone activity, ATP-binding subunit [Clostridium
sp. Maddingley MBC34-26]
Length = 823
Score = 771 bits (1992), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 369/643 (57%), Positives = 504/643 (78%), Gaps = 7/643 (1%)
Query: 23 PTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEG 82
P L++YG +LT L+ EG LDPV+GR + +R+++IL RR KNNPCLIGEPGVGKTA+ EG
Sbjct: 165 PMLDKYGRDLTALSSEGTLDPVIGRDSETQRLLEILCRRIKNNPCLIGEPGVGKTAVVEG 224
Query: 83 LAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDE 142
LAQRI G++P+ ++ K+V++LD+ ++AG KYRGEFEERLKK MEEI + II+FIDE
Sbjct: 225 LAQRIVEGNIPEILKNKRVVSLDLTSMIAGAKYRGEFEERLKKTMEEIIKDKNIIIFIDE 284
Query: 143 VHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVP 202
+HT+IGAG AEGAIDA+NILKP+LARGE+QCIGATT+DEYRK+IEKD ALERRFQPV V
Sbjct: 285 IHTIIGAGGAEGAIDASNILKPALARGEIQCIGATTIDEYRKYIEKDSALERRFQPVTVG 344
Query: 203 EPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGS 262
EP+ +ET++ILKGLR++YE HH++ TDEAL +A LS +YI+DRF+PDKAIDLIDE +
Sbjct: 345 EPTKEETLEILKGLRDKYEAHHRVEITDEALEAAVNLSDRYITDRFMPDKAIDLIDEGAA 404
Query: 263 RVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKG 322
+VR+++ P + ++LE+++ I KEK EA+R QDFE+A LRD+E +LK ++S++ D
Sbjct: 405 KVRIQNLTAPPDLKDLEEKIENIGKEKEEAIRVQDFERAANLRDKERNLKDKLSSMKDNW 464
Query: 323 KEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQD 382
+T+ VV I +VS+WT IP+EK++ ES+RLL +E LHKRV+GQ+
Sbjct: 465 ------DTQNSIKLLVVNAEKIASVVSSWTKIPIEKLTESESERLLNLENILHKRVVGQN 518
Query: 383 EAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDM 442
EAVK+I+RA+RRARVG+K+PNRPI SFIF GPTGVGK+EL+KALA FG E ++IR+DM
Sbjct: 519 EAVKSIARAVRRARVGIKDPNRPIGSFIFLGPTGVGKTELSKALAEAMFGDENSIIRIDM 578
Query: 443 SEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQIL 502
SE+ME H+VS+LIGSPPGYVG+ EGGQLTEAVRR+PY++VL DEIEKA+P+VFN++LQI+
Sbjct: 579 SEYMESHSVSRLIGSPPGYVGHEEGGQLTEAVRRKPYSIVLLDEIEKANPEVFNILLQIM 638
Query: 503 EDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTE 562
EDGRLTD KG+ V+FKNT++IMTSNVG+ I+K + IGF+ ++ Y ++K +
Sbjct: 639 EDGRLTDGKGKVVNFKNTIIIMTSNVGAHQIKK-QKSIGFNTGSSGDETEYEKMKENILG 697
Query: 563 ELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERV 622
ELKQ FRPEFLNR+D+ IVF +L+ ++ +I D+ML + RL+ ++I L + ++ +
Sbjct: 698 ELKQKFRPEFLNRIDDTIVFHKLSDEDLNQIVDLMLASIRKRLEDREIYLNFGDDSKKFL 757
Query: 623 VEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIV 665
+ +G + YGARPLRR I++ +ED ++E++L I+ GD V V
Sbjct: 758 LSKGIDLDYGARPLRRLIIKEVEDRLSEEILQGNIRIGDKVKV 800
>gi|15827032|ref|NP_301295.1| ATP-dependent Clp protease [Mycobacterium leprae TN]
gi|221229510|ref|YP_002502926.1| ATP-dependent Clp protease [Mycobacterium leprae Br4923]
gi|13432105|sp|P24428.2|CLPC_MYCLE RecName: Full=Probable ATP-dependent Clp protease ATP-binding
subunit
gi|13092579|emb|CAC29743.1| putative ATP-dependent Clp protease [Mycobacterium leprae]
gi|219932617|emb|CAR70328.1| putative ATP-dependent Clp protease [Mycobacterium leprae Br4923]
Length = 848
Score = 771 bits (1992), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/648 (58%), Positives = 503/648 (77%), Gaps = 15/648 (2%)
Query: 25 LEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLA 84
L+++G NLT A E KLDPV+GR+ +IERV+Q+L RRTKNNP LIGEPGVGKTA+ EGLA
Sbjct: 171 LDQFGRNLTAAAMESKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLA 230
Query: 85 QRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVH 144
Q I G+VP+T++ K++ TLD+G LVAG++YRG+FEERLKK+++EI +IILFIDE+H
Sbjct: 231 QAIVHGEVPETLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDELH 290
Query: 145 TLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEP 204
TL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEYRK+IEKD ALERRFQPV+V EP
Sbjct: 291 TLVGAGAAEGAIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEP 350
Query: 205 SVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRV 264
+V+ TI+ILKGLR+RYE HH++ TD A+V+AA L+ +YI+DRFLPDKAIDLIDEAG+R+
Sbjct: 351 TVEHTIEILKGLRDRYEAHHRVSITDSAMVAAATLADRYINDRFLPDKAIDLIDEAGARM 410
Query: 265 RLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKE 324
R+R P + RE ++++ + +EK A+ QDFEKA LRDRE L AQ +
Sbjct: 411 RIRRMTAPPDLREFDEKIAEARREKESAIDAQDFEKAASLRDREKQLVAQ--------RA 462
Query: 325 MSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQ 381
+ + +GD+ V+ EVD I ++ WTGIPV K++ E+ RLL+MEE LHKR+IGQ
Sbjct: 463 EREKQWRSGDL-DVIAEVDDEQIAEVLGNWTGIPVFKLTEAETTRLLRMEEELHKRIIGQ 521
Query: 382 DEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLD 441
++AVKA+S+AIRR R GLK+P RP SFIF+GP+GVGK+EL+KALA + FG ++A+I++D
Sbjct: 522 EDAVKAVSKAIRRTRAGLKDPKRPSGSFIFAGPSGVGKTELSKALANFLFGDDDALIQID 581
Query: 442 MSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQI 501
M EF +R T S+L G+PPGYVGY EGGQLTE VRR+P++VVLFDEIEKAH +++N +LQ+
Sbjct: 582 MGEFHDRFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNSLLQV 641
Query: 502 LEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVT 561
LEDGRLTD +GRTVDFKNT+LI TSN+G+S I K +G ++ Y R+K V
Sbjct: 642 LEDGRLTDGQGRTVDFKNTVLIFTSNLGTSDISKP---VGLGFTQGSGENDYERMKQKVN 698
Query: 562 EELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRER 621
+ELK++FRPEFLNR+D++IVF QL++ E+ + D+M+ V ++LK KD+ L++T + +
Sbjct: 699 DELKKHFRPEFLNRIDDIIVFHQLSRDEIIRMVDLMISRVANQLKVKDMTLELTNKAKAL 758
Query: 622 VVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDS 669
+ + G++P GARPLRR I R +ED ++EK+L E+ G V VDVD+
Sbjct: 759 LAKRGFDPVLGARPLRRTIQREIEDQLSEKILFEEVGPGQVVTVDVDN 806
>gi|118466434|ref|YP_879836.1| negative regulator of genetic competence ClpC/mecB [Mycobacterium
avium 104]
gi|254773513|ref|ZP_05215029.1| negative regulator of genetic competence ClpC/mecB [Mycobacterium
avium subsp. avium ATCC 25291]
gi|118167721|gb|ABK68618.1| negative regulator of genetic competence ClpC/mecB [Mycobacterium
avium 104]
Length = 822
Score = 771 bits (1992), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/648 (58%), Positives = 505/648 (77%), Gaps = 15/648 (2%)
Query: 25 LEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLA 84
L+++G NLT A EGKLDPV+GR+ +IERV+Q+L RRTKNNP LIGEPGVGKTA+ EGLA
Sbjct: 150 LDQFGRNLTAAAMEGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLA 209
Query: 85 QRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVH 144
Q I G VP+T++ K++ TLD+G LVAG++YRG+FEERLKK+++EI +IILFIDE+H
Sbjct: 210 QAIVHGQVPETLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDELH 269
Query: 145 TLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEP 204
TL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEYRK+IEKD ALERRFQPV+V EP
Sbjct: 270 TLVGAGAAEGAIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEP 329
Query: 205 SVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRV 264
+V+ TI+ILKGLR+RYE HH++ TD A+V+AA L+ +YI+DR+LPDKAIDLIDEAG+R+
Sbjct: 330 TVEHTIEILKGLRDRYEAHHRVSITDSAMVAAATLADRYINDRYLPDKAIDLIDEAGARM 389
Query: 265 RLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKE 324
R+R P + RE ++++ + +EK A+ QDFEKA LRDRE L AQ +
Sbjct: 390 RIRRMTAPPDLREFDEKIAEARREKESAIDAQDFEKAASLRDREKQLVAQ--------RA 441
Query: 325 MSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQ 381
+ + +GD+ VV EVD I ++ WTGIPV K++ E+ RLL+ME+ LHKR+IGQ
Sbjct: 442 EREKQWRSGDL-DVVAEVDDEQIAEVLGNWTGIPVFKLTEAETTRLLRMEDELHKRIIGQ 500
Query: 382 DEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLD 441
++AVKA+S+AIRR R GLK+P RP SFIF+GP+GVGK+EL+KALA + FG ++A+I++D
Sbjct: 501 EDAVKAVSKAIRRTRAGLKDPKRPSGSFIFAGPSGVGKTELSKALANFLFGDDDALIQID 560
Query: 442 MSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQI 501
M EF +R T S+L G+PPGYVGY EGGQLTE VRR+P++VVLFDEIEKAH +++N +LQ+
Sbjct: 561 MGEFHDRFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNSLLQV 620
Query: 502 LEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVT 561
LEDGRLTD +GRTVDFKNT+LI TSN+G+S I K +G +++Y R+K V
Sbjct: 621 LEDGRLTDGQGRTVDFKNTVLIFTSNLGTSDISK---PVGLGFTQGGGENNYERMKQKVN 677
Query: 562 EELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRER 621
+ELK++FRPEFLNR+D++IVF QLT+ E+ + D+M+ V +LK+KD++L +T++ +
Sbjct: 678 DELKKHFRPEFLNRIDDIIVFHQLTRDEIIRMVDLMITRVAGQLKSKDMDLVLTDKAKAL 737
Query: 622 VVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDS 669
+ + G++P GARPLRR I R +ED ++EK+L E+ G V VDVD+
Sbjct: 738 LAKRGFDPVLGARPLRRTIQREIEDQLSEKILFEEVGPGQIVTVDVDN 785
>gi|306823273|ref|ZP_07456649.1| ATP-dependent Clp protease ATP-binding subunit ClpC
[Bifidobacterium dentium ATCC 27679]
gi|309801911|ref|ZP_07696026.1| negative regulator of genetic competence ClpC/MecB [Bifidobacterium
dentium JCVIHMP022]
gi|304553905|gb|EFM41816.1| ATP-dependent Clp protease ATP-binding subunit ClpC
[Bifidobacterium dentium ATCC 27679]
gi|308221467|gb|EFO77764.1| negative regulator of genetic competence ClpC/MecB [Bifidobacterium
dentium JCVIHMP022]
Length = 863
Score = 771 bits (1992), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/666 (57%), Positives = 522/666 (78%), Gaps = 11/666 (1%)
Query: 25 LEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLA 84
L+++G NLT A GKLDPV+GR +IERV+ +L RRTKNNP LIGEPGVGKTA+ EGLA
Sbjct: 175 LDQFGRNLTAEAASGKLDPVIGRSSEIERVMVVLSRRTKNNPVLIGEPGVGKTAVVEGLA 234
Query: 85 QRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVH 144
Q+I +GDVP+T++GK+V +LD+G +VAG++YRG+FEERLKK+++EIK +I+LFIDE+H
Sbjct: 235 QKINAGDVPETLKGKQVYSLDLGSMVAGSRYRGDFEERLKKVLKEIKTRGDIVLFIDEIH 294
Query: 145 TLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEP 204
T++GAG+A+GA+ A+++LKP LARGELQ IGATT DEYRK+IEKD ALERRFQP++V EP
Sbjct: 295 TIVGAGSADGALGASDMLKPMLARGELQTIGATTTDEYRKYIEKDAALERRFQPIQVHEP 354
Query: 205 SVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRV 264
++ ETI+ILKGLRERYE HH + TD AL SAA+LS +YI DR LPDKAIDLIDEAG+R+
Sbjct: 355 TIAETIEILKGLRERYENHHHVTITDGALQSAAELSSRYIQDRHLPDKAIDLIDEAGARL 414
Query: 265 RLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKE 324
R+R P E +EL+ ++ ++ +EK++A++ QDFEKA ELRDR+ L+A+ K KE
Sbjct: 415 RIRRLTAPPELKELDAKVAKLAEEKDQAIKDQDFEKAAELRDRQEKLEAE-----RKEKE 469
Query: 325 MSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEA 384
S E E+ DV VV E I ++S TGIPV K++ ES +L+ ME LHKR+IGQDEA
Sbjct: 470 SSWREGES-DVKMVVDEDVIAEVISQTTGIPVFKLTQAESKKLMSMESELHKRIIGQDEA 528
Query: 385 VKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSE 444
V A+SR+IRRARVGLK+P RP SFIF+GPTGVGK+ELAK LA + F E+A+IR+DMSE
Sbjct: 529 VSALSRSIRRARVGLKDPKRPSGSFIFAGPTGVGKTELAKTLAEFLFDDEDALIRVDMSE 588
Query: 445 FMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILED 504
F E++ S+L G+PPGYVGY EGG+LTE VRR+P++VVLFDEIEKAHPD+FN +LQ+L+D
Sbjct: 589 FSEKYAASRLFGAPPGYVGYEEGGELTEKVRRKPFSVVLFDEIEKAHPDIFNTLLQVLDD 648
Query: 505 GRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEEL 564
G LTD +GR VDFKNT++I+T+N+G+ I K GF+L + +SSY R+K V+ EL
Sbjct: 649 GHLTDGQGRKVDFKNTIIILTTNLGTRDIAKAA-NTGFNLGTN-TESSYQRMKDQVSSEL 706
Query: 565 KQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVE 624
KQ FRPEFLNRLD++IVF+QLT+ +V++I D+ +K++ DRL + + L++T+ ++ + +
Sbjct: 707 KQQFRPEFLNRLDDIIVFKQLTEPQVRQIVDLDVKQLNDRLFDRHMSLELTDAAKDLLAQ 766
Query: 625 EGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNGSSGAPE 684
+G++P GARPLRR I R +ED+++EK+L ++++G V VD + +G +L + + E
Sbjct: 767 KGFDPLLGARPLRRVIQRDIEDAISEKILMGDLEDGQRVKVDAEGEG---ILGEFTFSGE 823
Query: 685 SLADPL 690
+ +P+
Sbjct: 824 AFEEPV 829
>gi|390936556|ref|YP_006394115.1| putative ATP-dependent Clp protease ATP-binding subunit
[Bifidobacterium bifidum BGN4]
gi|389890169|gb|AFL04236.1| putative ATP-dependent Clp protease ATP-binding subunit
[Bifidobacterium bifidum BGN4]
Length = 858
Score = 771 bits (1992), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 383/669 (57%), Positives = 518/669 (77%), Gaps = 8/669 (1%)
Query: 3 GESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRT 62
G+ A GV S L+++G NLT A EGKLDPV+GR +IERV+ +L RRT
Sbjct: 153 GKGDLANAGGVQDKRSQTGSAILDQFGRNLTAEAAEGKLDPVIGRTNEIERVMVVLSRRT 212
Query: 63 KNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEER 122
KNNP LIGEPGVGKTA+ EGLAQ+I +GDVP+T++ K+V +LD+G +VAG++YRG+FEER
Sbjct: 213 KNNPVLIGEPGVGKTAVVEGLAQKINAGDVPETLKDKQVYSLDLGSMVAGSRYRGDFEER 272
Query: 123 LKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEY 182
LKK+++EIK +I+LFIDE+HT++GAG+A+GA+ A+++LKP LARGELQ IGATT DEY
Sbjct: 273 LKKVLKEIKTRGDIVLFIDEIHTIVGAGSADGALGASDMLKPMLARGELQTIGATTTDEY 332
Query: 183 RKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQ 242
RK+IEKD ALERRFQP++V EP++ ETI+ILKGLR RYE HH + TD AL SAA+LS +
Sbjct: 333 RKYIEKDAALERRFQPIQVHEPTIAETIEILKGLRSRYENHHHVTITDGALQSAAELSSR 392
Query: 243 YISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAG 302
YI DR LPDKAIDLIDEAG+R+R++ P E +EL++++ ++ EK++A++ QDFEKA
Sbjct: 393 YIQDRNLPDKAIDLIDEAGARLRIKRLTAPPELKELDQKVAKVAAEKDKAIKDQDFEKAA 452
Query: 303 ELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTD 362
ELRD + L+A+ K KE S E E+ DV VV E I ++S+ TGIPV K++
Sbjct: 453 ELRDNQEKLEAE-----RKEKESSWREGES-DVEMVVNEDVIAQVISSTTGIPVFKLTQA 506
Query: 363 ESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSEL 422
ES +LL ME LHKR+IGQDEAV A+SR+IRR RVGLK+P RP SFIF+GPTGVGK+EL
Sbjct: 507 ESKKLLGMESELHKRIIGQDEAVSALSRSIRRTRVGLKDPKRPAGSFIFAGPTGVGKTEL 566
Query: 423 AKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVV 482
AKALA + F E+A+IR+DMSEF E++ S+L G+PPGYVGY EGG+LTE VRR+P++VV
Sbjct: 567 AKALAEFLFDDEDALIRVDMSEFSEKYAASRLFGAPPGYVGYEEGGELTEKVRRKPFSVV 626
Query: 483 LFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGF 542
LFDEIEKAHPD+FN +LQ+L+DG LTD +GR VDFKNT++I+T+N+G+ I K GF
Sbjct: 627 LFDEIEKAHPDIFNTLLQVLDDGHLTDGQGRKVDFKNTIIILTTNLGTRDISKAA-NTGF 685
Query: 543 DLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVF 602
+L + +SSY R+K V+ ELKQ FRPEFLNRLD++IVFRQLT+ +V++I D+ +K++
Sbjct: 686 NLGSN-AESSYQRMKDQVSSELKQQFRPEFLNRLDDIIVFRQLTEPQVRQIVDLDIKQLN 744
Query: 603 DRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDS 662
DRL + + L++T ++ + ++G++P GARPLRR I R +ED+++EK+L E+++G
Sbjct: 745 DRLFDRHMSLELTPAAKDLLAQKGFDPLLGARPLRRVIQRDIEDAISEKILMGELEDGQR 804
Query: 663 VIVDVDSDG 671
V+VD + +G
Sbjct: 805 VVVDSEGEG 813
>gi|289705692|ref|ZP_06502076.1| negative regulator of genetic competence ClpC/MecB [Micrococcus
luteus SK58]
gi|289557532|gb|EFD50839.1| negative regulator of genetic competence ClpC/MecB [Micrococcus
luteus SK58]
Length = 851
Score = 771 bits (1992), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/685 (57%), Positives = 514/685 (75%), Gaps = 14/685 (2%)
Query: 7 EAVGAGVG-GGSSGNKMPT--LEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTK 63
E GAGVG G SG + L+++G NLT A +GKLDPV+GR ++ERV+Q+L RRTK
Sbjct: 154 ETAGAGVGQGAESGQNAGSVVLDQFGRNLTAAAHDGKLDPVIGRAGEMERVMQVLSRRTK 213
Query: 64 NNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERL 123
NNP LIGEPGVGKTA+ EGLAQ I GDVP+T+ K++ +LD+G LVAG++YRG+FEERL
Sbjct: 214 NNPVLIGEPGVGKTAVVEGLAQAIDRGDVPETLRDKQLYSLDLGSLVAGSRYRGDFEERL 273
Query: 124 KKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYR 183
KK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEYR
Sbjct: 274 KKVLKEIRTRGDIILFIDEIHTLVGAGAAEGAIDAASILKPMLARGELQTIGATTLDEYR 333
Query: 184 KHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQY 243
KHIEKD ALERRFQP++V EPSV++ +IL+GLR+RYE HHK+ TD AL +AA L+ +Y
Sbjct: 334 KHIEKDAALERRFQPIQVAEPSVEDATEILRGLRDRYEAHHKVSITDGALKAAAGLADRY 393
Query: 244 ISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGE 303
+SDR LPDKAIDLIDEAG+R+R+R +P E + E + ++ +K A+ GQDFE A
Sbjct: 394 VSDRHLPDKAIDLIDEAGARLRIRRMTVPPEIKAYESRIAEVRTQKEAAIDGQDFEGAAR 453
Query: 304 LRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD-IQHIVSAWTGIPVEKVSTD 362
LRD+E L+ D+ +E +A D + D I ++S TGIPV K++ +
Sbjct: 454 LRDQEQQLE-------DERREKEQAWRTGADADVATVDEDLIAEVLSKSTGIPVFKLTEE 506
Query: 363 ESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSEL 422
E+DRL MEE LH+RVIGQDEA+K++SRAIRR R GLK+PNRP SFIF+GPTGVGK+EL
Sbjct: 507 ETDRLRNMEEELHRRVIGQDEAIKSLSRAIRRTRAGLKDPNRPSGSFIFAGPTGVGKTEL 566
Query: 423 AKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVV 482
AK+LA + FG E+A+I LDMSEF E+HTVS+L G+PPGYVGY EGGQLTE VRRRP++VV
Sbjct: 567 AKSLAEFLFGDEDALITLDMSEFQEKHTVSRLFGAPPGYVGYEEGGQLTEKVRRRPFSVV 626
Query: 483 LFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGF 542
LFDE+EKAH D+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N+G+ I K G GF
Sbjct: 627 LFDEVEKAHQDLFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNLGTRDISK-GVMTGF 685
Query: 543 DLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVF 602
D + Y R+K V EEL+Q+FRPEFLNR+D++IVF QL K E+ EI D+ + +
Sbjct: 686 QSATD-TTTGYERMKGKVKEELRQHFRPEFLNRVDDVIVFPQLQKHEIVEIVDLFISRLG 744
Query: 603 DRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDS 662
RL +D+ +++T+ +E + + GY+P+ GARPLRR I +++ED ++EK+L EI G
Sbjct: 745 KRLAEQDMSIELTQSAKELLADRGYDPAMGARPLRRTIQQMVEDQLSEKILFGEIPAGSH 804
Query: 663 VIVDVDSDGNVTVLNGS-SGAPESL 686
+ VD +G L + SG E+L
Sbjct: 805 ITVDATGEGEGAELTFTFSGGREAL 829
>gi|410867351|ref|YP_006981962.1| Negative regulator of genetic competence ClpC/MecB
[Propionibacterium acidipropionici ATCC 4875]
gi|410823992|gb|AFV90607.1| Negative regulator of genetic competence ClpC/MecB
[Propionibacterium acidipropionici ATCC 4875]
Length = 841
Score = 771 bits (1991), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/692 (55%), Positives = 522/692 (75%), Gaps = 13/692 (1%)
Query: 3 GESTEAVGAGVGG-GSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRR 61
G EA AG G + + L+++G NLT+ A++G+LDPV+GR+ +IERV+ +L RR
Sbjct: 147 GNDKEAATAGAPDVGPAQSSATVLDQFGRNLTQAAKDGELDPVIGRETEIERVMTVLSRR 206
Query: 62 TKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEE 121
TKNNP LIGEPGVGK+A EGLAQ I GDVP+T+ GK++ +LD+G +VAG++YRG+FEE
Sbjct: 207 TKNNPVLIGEPGVGKSACVEGLAQAIVRGDVPETLRGKQIYSLDLGSMVAGSRYRGDFEE 266
Query: 122 RLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDE 181
R+KK+++EIK +I+LFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ +GATTLDE
Sbjct: 267 RMKKVLKEIKTRGDIVLFIDEIHTLVGAGAAEGAIDAASILKPMLARGELQTVGATTLDE 326
Query: 182 YRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSY 241
YRKHIEKD ALERRFQP++V EPSV TI+ILKGLR++YE HHK+ TDEA+ +AA LS
Sbjct: 327 YRKHIEKDAALERRFQPIQVAEPSVPLTIEILKGLRDKYEAHHKITITDEAISAAANLSA 386
Query: 242 QYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKA 301
+Y+ DRFLPDKAIDLIDEAG+R+R+R P + RE++ ++ Q+ +K A+ QDFE+A
Sbjct: 387 RYVQDRFLPDKAIDLIDEAGARMRIRRMTAPPDLREIDDKIAQVRIDKESAIDAQDFERA 446
Query: 302 GELRDREMDLKAQISALVDKGKEMSKAETEAGD--VGPVVTEVDIQHIVSAWTGIPVEKV 359
LRD E L ++ +E + +AGD V VV E +I ++S+ TGIPV K+
Sbjct: 447 AGLRDDEKKLISE--------REAKEEAWKAGDSSVPAVVGEEEIAEVLSSSTGIPVFKL 498
Query: 360 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 419
+ +ES+RLL ME+ + KR +GQ +AVKA+SR+IRR R GLK+P RP+ SFIF+GP+GVGK
Sbjct: 499 TEEESERLLHMEDEIGKRYVGQTDAVKALSRSIRRTRAGLKDPKRPMGSFIFAGPSGVGK 558
Query: 420 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 479
+EL KAL + FG E+A+I LDMSE+ E+HT S++ GSPPG+VGY EGGQLTE VRR+P+
Sbjct: 559 TELTKALTEFLFGDEDALITLDMSEYSEKHTASRMFGSPPGFVGYEEGGQLTEKVRRKPF 618
Query: 480 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 539
+V+LFDEIEKAHPD+FN +LQIL++GRLTD++GR VDFKNT++++T+N+G+ I K
Sbjct: 619 SVILFDEIEKAHPDIFNSLLQILDEGRLTDAQGRVVDFKNTVIVLTTNLGTRDISK-SVN 677
Query: 540 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 599
+GF DE +SSY R+K+ VTEELK +FRPEFLNRLDE+IVF QL+ +V I D+M+
Sbjct: 678 LGFSKAGDE-ESSYERMKAKVTEELKGHFRPEFLNRLDEIIVFHQLSHEDVLRIVDLMVG 736
Query: 600 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 659
E+ RL KD+ ++VT ++ + + G++P GARPLRR I R +ED +AEK+L E+K
Sbjct: 737 ELEQRLGDKDMSIEVTPAAKQLLADRGFDPLMGARPLRRTIQRDVEDVLAEKILFGEVKP 796
Query: 660 GDSVIVDVDSDGNVTVLNGSSGAPESLADPLP 691
G V+VDV +G+ + + L D +P
Sbjct: 797 GQIVLVDVAPEGSEQPFTFTGTSRGELPDEVP 828
>gi|325675027|ref|ZP_08154714.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Rhodococcus
equi ATCC 33707]
gi|325554613|gb|EGD24288.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Rhodococcus
equi ATCC 33707]
Length = 851
Score = 771 bits (1991), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 384/668 (57%), Positives = 516/668 (77%), Gaps = 15/668 (2%)
Query: 4 ESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTK 63
E EA G+ G+ + L+++G NLT+ A EGKLDPV+GR +IERV+Q+L RRTK
Sbjct: 149 EPAEAGGSRGEAGTPSTSL-VLDQFGRNLTQAALEGKLDPVIGRSKEIERVMQVLSRRTK 207
Query: 64 NNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERL 123
NNP LIGEPGVGKTA+ EGLAQ I +G+VP+T++ K++ TLD+G LVAG++YRG+FEERL
Sbjct: 208 NNPVLIGEPGVGKTAVVEGLAQAIVNGEVPETLKDKQLYTLDLGSLVAGSRYRGDFEERL 267
Query: 124 KKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYR 183
KK+++EI +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEYR
Sbjct: 268 KKVLKEINTRGDIILFIDELHTLVGAGAAEGAIDAASILKPKLARGELQTIGATTLDEYR 327
Query: 184 KHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQY 243
K+IEKD ALERRFQPV+V EP+V+ TI+ILKGLR+RYE HH++ TD ALV+AA L+ +Y
Sbjct: 328 KYIEKDAALERRFQPVQVGEPTVEHTIEILKGLRDRYEAHHRVSITDSALVAAATLADRY 387
Query: 244 ISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGE 303
I+DRFLPDKAIDLIDEAG+R+R+R P + RE + ++ +EK A+ QDFEKA
Sbjct: 388 INDRFLPDKAIDLIDEAGARMRIRRMTAPPDLREFDDKIADARREKESAIDAQDFEKAAN 447
Query: 304 LRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKVS 360
LRD+E L AQ + + + +GD+ V+ EVD I ++ WTGIPV K++
Sbjct: 448 LRDKEKTLVAQ--------RAEREKQWRSGDL-DVIAEVDDEQIAEVLGNWTGIPVFKLT 498
Query: 361 TDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 420
+E+ RLL+MEE LHKR+IGQ++AVKA+S+AIRR R GLK+P RP SFIF+GP+GVGK+
Sbjct: 499 EEETTRLLRMEEELHKRIIGQEDAVKAVSKAIRRTRAGLKDPKRPSGSFIFAGPSGVGKT 558
Query: 421 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 480
EL+KALA + FG ++A+I++DM EF +R T S+L G+PPGYVGY EGGQLTE VRR+P++
Sbjct: 559 ELSKALANFLFGEDDALIQIDMGEFHDRFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFS 618
Query: 481 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI 540
VVLFDEIEKAH +++N +LQ+LEDGRLTD +GRTVDFKNT+LI TSN+G+S I K +
Sbjct: 619 VVLFDEIEKAHQEIYNTLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGTSDISK-AVGL 677
Query: 541 GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 600
GF +S+Y R+K V +ELK++FRPEFLNR+D++IVF QL++ E+ ++ D+M+
Sbjct: 678 GFSAGTG-SESNYERMKLKVHDELKKHFRPEFLNRIDDIIVFHQLSQNEIIQMVDLMIGR 736
Query: 601 VFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEG 660
V +LK KD+++++TE+ + + + G++P GARPLRR I R +ED ++EK+L E+ G
Sbjct: 737 VEAQLKNKDMDIELTEQAKSLLAKRGFDPVLGARPLRRTIQREIEDQLSEKILFNELGPG 796
Query: 661 DSVIVDVD 668
V+VDV+
Sbjct: 797 QIVLVDVE 804
>gi|359410042|ref|ZP_09202507.1| ATPase AAA-2 domain protein [Clostridium sp. DL-VIII]
gi|357168926|gb|EHI97100.1| ATPase AAA-2 domain protein [Clostridium sp. DL-VIII]
Length = 823
Score = 771 bits (1991), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 370/644 (57%), Positives = 506/644 (78%), Gaps = 8/644 (1%)
Query: 23 PTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEG 82
P L++YG +LT L++E LDPV+GR + +R+++IL RR KNNPCLIGEPGVGKTA+ EG
Sbjct: 165 PMLDKYGRDLTALSKEQGLDPVIGRDNETQRLLEILCRRIKNNPCLIGEPGVGKTAVVEG 224
Query: 83 LAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDE 142
LAQRI G++P+ ++ K+VI+LD+ ++AG KYRGEFEERLKK MEEI + +II+FIDE
Sbjct: 225 LAQRIVEGNIPEILKSKRVISLDLTSMIAGAKYRGEFEERLKKTMEEIVKDKDIIIFIDE 284
Query: 143 VHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVP 202
+HT+IGAG AEGAIDA+NILKP+LARGE+QCIGATT+DEYRK+IEKD ALERRFQP+ V
Sbjct: 285 IHTIIGAGGAEGAIDASNILKPALARGEIQCIGATTIDEYRKYIEKDSALERRFQPITVG 344
Query: 203 EPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGS 262
EPS +ET++ILKGLR++YE HH++ TDEAL +A LS +YI+DRF+PDKAIDLIDE +
Sbjct: 345 EPSKEETLEILKGLRDKYEAHHRVEITDEALEAAVNLSDRYITDRFMPDKAIDLIDEGAA 404
Query: 263 RVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKG 322
+VR++ P + ++LE+++ I KEK EA+R QDFE+A LRD+E LK Q++ + D
Sbjct: 405 KVRIQSLTTPPDLKDLEEKIENIGKEKEEAIRVQDFERAARLRDQERALKEQLNNMKDNW 464
Query: 323 KEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQD 382
+ +T +V +I +VS+WT IP+EK++ ES+RLL +E+ LH+RVIGQ+
Sbjct: 465 DTQNSIKT------LIVDAENIASVVSSWTKIPIEKLTESESERLLNLEDILHRRVIGQN 518
Query: 383 EAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDM 442
EAVK+I+RA+RRARVG+K+PNRPI SFIF GPTGVGK+EL+KALA FG E ++IR+DM
Sbjct: 519 EAVKSIARAVRRARVGIKDPNRPIGSFIFLGPTGVGKTELSKALAEAMFGDENSIIRVDM 578
Query: 443 SEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQIL 502
SE+ME H+V++LIGSPPGYVGY EGGQLTEAVRR+PY++VL DEIEKA+P+VFN++LQI+
Sbjct: 579 SEYMESHSVARLIGSPPGYVGYEEGGQLTEAVRRKPYSIVLLDEIEKANPEVFNILLQIM 638
Query: 503 EDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKD-SSYNRIKSLVT 561
EDGRLTD KG+ V+FKNT++IMTSNVG+ I+K + IGF + D + + Y ++K +
Sbjct: 639 EDGRLTDGKGKIVNFKNTIIIMTSNVGAHQIKK-QKSIGFSSNNDSNNETEYEKMKENIL 697
Query: 562 EELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRER 621
ELKQ FRPEFLNR+D+ IVF +L+ ++ +I D+ML + RL++++I L E ++
Sbjct: 698 GELKQKFRPEFLNRIDDTIVFHKLSDEDLNQIIDLMLASIRKRLESREIYLNFEENSKKF 757
Query: 622 VVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIV 665
++ +G + YGARPLRR I++ +ED ++E++L I+ GD V V
Sbjct: 758 LLNKGIDLDYGARPLRRLIIKEVEDRLSEEILQGNIRIGDRVRV 801
>gi|402570803|ref|YP_006620146.1| chaperone ATPase [Desulfosporosinus meridiei DSM 13257]
gi|402252000|gb|AFQ42275.1| ATPase with chaperone activity, ATP-binding subunit
[Desulfosporosinus meridiei DSM 13257]
Length = 813
Score = 771 bits (1991), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/646 (60%), Positives = 510/646 (78%), Gaps = 9/646 (1%)
Query: 23 PTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEG 82
P L E+G +LT A EG+LDPV+GR+ +IERV+Q+L RRTKNNP LIGEPGVGKTAIAEG
Sbjct: 168 PALNEFGRDLTLQAREGRLDPVIGREKEIERVIQVLSRRTKNNPALIGEPGVGKTAIAEG 227
Query: 83 LAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDE 142
LAQ I + VP+ + K+VITLD+ +VAG+KYRGEFEERLKK+MEEI+ IILFIDE
Sbjct: 228 LAQGIVNNRVPEILVNKRVITLDLSAMVAGSKYRGEFEERLKKVMEEIRADGNIILFIDE 287
Query: 143 VHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVP 202
+HTLIGAGAAEGAIDAANILKP+LARGELQCIGATTL+EYRK+IEKD ALERRFQP+ V
Sbjct: 288 LHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLEEYRKYIEKDSALERRFQPISVG 347
Query: 203 EPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGS 262
EP+V+E I IL+GLR+RYE HH+++ TDE++ +AA+LS +YISDRFLPDKAIDL+DEA S
Sbjct: 348 EPTVEEAIIILRGLRDRYEAHHRVKITDESIEAAARLSDRYISDRFLPDKAIDLMDEAAS 407
Query: 263 RVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKG 322
RVRL P + + LE+E ++ KEK AV Q+FEKA LRD+E L+A+++
Sbjct: 408 RVRLASFTAPPDLKLLEEEAERLKKEKEAAVSSQEFEKAAGLRDQEQKLRAELA------ 461
Query: 323 KEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQD 382
++ E + +VT DI IV++WTGIPV+K++ +ES+RLL +E+ LH+R+IGQ+
Sbjct: 462 EQRGAWEHQRYKENAMVTGDDIAQIVASWTGIPVKKLAEEESERLLHLEDLLHQRLIGQE 521
Query: 383 EAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDM 442
+AV A++RA+RRAR GLK+P RPI SFIF GPTGVGK+EL +ALA FG E+A+IR+DM
Sbjct: 522 DAVTAVARAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELGRALAEGMFGDEKALIRIDM 581
Query: 443 SEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQIL 502
SE+ME+H VS+L+G+PPGYVG+ EGGQLTEAVRR+PY+VVL DEIEKAHP+ FN++LQ+L
Sbjct: 582 SEYMEKHAVSRLVGAPPGYVGHDEGGQLTEAVRRKPYSVVLLDEIEKAHPEAFNILLQVL 641
Query: 503 EDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTE 562
EDGRLTD+KGRTVDF+NT++IMTSNVGSS ++K +GF DEK + Y ++ V E
Sbjct: 642 EDGRLTDTKGRTVDFRNTVIIMTSNVGSSFLKK--EAMGFAPKKDEK-TDYKNMRGHVME 698
Query: 563 ELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERV 622
ELK+ FRPEFLNR+DE++VF L + +IADI+ ++V RL +ELQV + E +
Sbjct: 699 ELKRSFRPEFLNRIDEIVVFHSLQDEHLLKIADILTRQVNKRLSENGLELQVEQSAIELI 758
Query: 623 VEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVD 668
+EG +P +GARPLRRAI RL+ED+++EK+L K GD +IV+ +
Sbjct: 759 AKEGNDPIFGARPLRRAIQRLIEDALSEKILEGVFKAGDRIIVEAE 804
>gi|229494287|ref|ZP_04388050.1| ATPase family protein protein [Rhodococcus erythropolis SK121]
gi|453067540|ref|ZP_21970827.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Rhodococcus
qingshengii BKS 20-40]
gi|226183250|dbj|BAH31354.1| putative ATP-dependent Clp protease ATP-binding subunit ClpC
[Rhodococcus erythropolis PR4]
gi|229318649|gb|EEN84507.1| ATPase family protein protein [Rhodococcus erythropolis SK121]
gi|452766831|gb|EME25074.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Rhodococcus
qingshengii BKS 20-40]
Length = 847
Score = 771 bits (1991), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/670 (57%), Positives = 511/670 (76%), Gaps = 17/670 (2%)
Query: 4 ESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTK 63
E TE G G+ + L+++G NLT+ A EGKLDPV+GR +IERV+Q+L RRTK
Sbjct: 149 EPTETGGTRGEAGTPSTSL-VLDQFGRNLTQAALEGKLDPVIGRSKEIERVMQVLSRRTK 207
Query: 64 NNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERL 123
NNP LIGEPGVGKTA+ EGLAQ I +G+VP+T++ K++ TLD+G LVAG++YRG+FEERL
Sbjct: 208 NNPVLIGEPGVGKTAVVEGLAQAIVNGEVPETLKDKQLYTLDLGSLVAGSRYRGDFEERL 267
Query: 124 KKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYR 183
KK+++EI +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEYR
Sbjct: 268 KKVLKEINTRGDIILFIDELHTLVGAGAAEGAIDAASILKPKLARGELQTIGATTLDEYR 327
Query: 184 KHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQY 243
K+IEKD ALERRFQPV+V EP+V+ TI+ILKGLR+RYE HH++ TD ALV+AA L+ +Y
Sbjct: 328 KYIEKDAALERRFQPVQVGEPTVEHTIEILKGLRDRYEAHHRVSITDGALVAAATLADRY 387
Query: 244 ISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGE 303
I+DRFLPDKAIDLIDEAG+R+R+R P + RE + + +EK A+ QDFEKA
Sbjct: 388 INDRFLPDKAIDLIDEAGARMRIRRMTAPPDLREFDDRIADARREKESAIDAQDFEKAAN 447
Query: 304 LRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKVS 360
LRD+E L AQ + + + AGD+ V+ EVD I ++ WTGIPV K++
Sbjct: 448 LRDKEKTLVAQ--------RAEREKQWRAGDL-DVIAEVDDEQIAEVLGNWTGIPVFKLT 498
Query: 361 TDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 420
+E+ RLL+MEE LHKR+IGQ+EAVK++S+AIRR R GLK+P RP SFIF+GP+GVGK+
Sbjct: 499 EEETTRLLRMEEELHKRIIGQEEAVKSVSKAIRRTRAGLKDPKRPSGSFIFAGPSGVGKT 558
Query: 421 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 480
ELAK+LA + FG ++A+I++DM EF +R T S+L G+PPGYVGY EGGQLTE VRR+P++
Sbjct: 559 ELAKSLANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFS 618
Query: 481 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI 540
VVLFDEIEKAH +++N +LQ+LEDGRLTD +GRTVDFKNT+LI TSN+G+S I K +
Sbjct: 619 VVLFDEIEKAHQEIYNTLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGTSDISKA---V 675
Query: 541 GFDLDYDE-KDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 599
G +S+Y R+K V +ELK++FRPEFLNR+D+++VF QLT ++ ++ D+ML
Sbjct: 676 GLGFSSGTGTESNYERMKLKVHDELKKHFRPEFLNRIDDIVVFHQLTNEQIVQMVDLMLA 735
Query: 600 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 659
V LK KD+ ++VT++ + + + G++P GARPLRR I R +ED M+EK+L EI
Sbjct: 736 RVEAALKNKDMAMEVTDKAKSLLAKRGFDPVLGARPLRRTIQREIEDQMSEKILFGEIGP 795
Query: 660 GDSVIVDVDS 669
G V+VDV++
Sbjct: 796 GHIVLVDVEN 805
>gi|383809434|ref|ZP_09964954.1| ATP-dependent Clp protease ATP-binding subunit family protein
[Rothia aeria F0474]
gi|383447786|gb|EID50763.1| ATP-dependent Clp protease ATP-binding subunit family protein
[Rothia aeria F0474]
Length = 856
Score = 771 bits (1991), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 383/684 (55%), Positives = 519/684 (75%), Gaps = 19/684 (2%)
Query: 3 GESTEAVGAGVGGGSSGNKMPT----LEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQIL 58
G+S E AGVG G+S P L+++G NLT A EG+LDPV+GR ++ERV+Q+L
Sbjct: 149 GDSKET--AGVGAGNSREGTPAGSTILDQFGRNLTAAAREGQLDPVIGRHHEMERVMQVL 206
Query: 59 GRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGE 118
RRTKNNP LIGEPGVGKTA+ EGLAQ I GDVP+T++ K + TLD+G LVAG++YRG+
Sbjct: 207 SRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGDVPETLKDKHLYTLDLGSLVAGSRYRGD 266
Query: 119 FEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATT 178
FEERLKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATT
Sbjct: 267 FEERLKKVLKEIRTRGDIILFIDEIHTLVGAGAAEGAIDAASILKPMLARGELQTIGATT 326
Query: 179 LDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQ 238
LDEYRKHIEKD ALERRFQP++V EPS + +QILKG+R++YE HH++ +DEA+ +A
Sbjct: 327 LDEYRKHIEKDAALERRFQPIQVDEPSQELAVQILKGVRDKYEAHHRVTISDEAIETAVN 386
Query: 239 LSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDF 298
L+ +YISDRFLPDKA+DLIDEAG+R+R++ P E + LE++ ++ + K +A+R QD+
Sbjct: 387 LAARYISDRFLPDKAVDLIDEAGARLRIKRMTAPPEIKVLEEKAGKLKRAKEDAIREQDY 446
Query: 299 EKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEK 358
EKA LRD E ++ + + KA E GD VT I ++++ TG+PV K
Sbjct: 447 EKAAGLRDEE-------QKVLQEKDQKEKAWRENGDAFGEVTPEVISEVLASSTGVPVYK 499
Query: 359 VSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVG 418
++ +ES RLLKME+ LHKRVIGQ+ A+KA++R+IRR R GLK+PNRP SFIF+GPTGVG
Sbjct: 500 ITEEESSRLLKMEDELHKRVIGQEHAIKALARSIRRTRAGLKDPNRPGGSFIFAGPTGVG 559
Query: 419 KSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRP 478
K+ELAKALA + FG ++A+I LDMSE+ E+HTVS+L G+PPGYVGY EGGQLTE VRR+P
Sbjct: 560 KTELAKALAEFLFGDQDALITLDMSEYQEKHTVSRLFGAPPGYVGYEEGGQLTEKVRRKP 619
Query: 479 YTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR 538
++VVLFDE+EKAH D+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N+GS + R
Sbjct: 620 FSVVLFDEVEKAHADLFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNLGSRDV---NR 676
Query: 539 R--IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADI 596
R +GF D+ + Y R+++ V E LK++FRPEFLNR+D++IVF QL++ E+ +I D+
Sbjct: 677 RVPVGFQA-MDDNAADYERMQARVMENLKEHFRPEFLNRVDDIIVFPQLSETEILQIVDL 735
Query: 597 MLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLARE 656
+ + RL +D+ +++T + + +GY+P+ GARPLRR + R +ED+++EK+L E
Sbjct: 736 FVGRLAKRLADQDMSIELTNAAKVLMASKGYDPAMGARPLRREMQRNIEDALSEKILFGE 795
Query: 657 IKEGDSVIVDVDSDGNVTVLNGSS 680
IK G+ + VD + +G+ SS
Sbjct: 796 IKPGEKITVDAEGEGDDAKFTFSS 819
>gi|408501309|ref|YP_006865228.1| transporter, probably Type VI secretion system, EvpA-P
[Bifidobacterium asteroides PRL2011]
gi|408466133|gb|AFU71662.1| transporter, probably Type VI secretion system, EvpA-P
[Bifidobacterium asteroides PRL2011]
Length = 882
Score = 771 bits (1991), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/669 (56%), Positives = 526/669 (78%), Gaps = 10/669 (1%)
Query: 3 GESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRT 62
G+ A G GG +G+ + L+++G NLT+ A EGKLDPV+GR +IERV+ +L RRT
Sbjct: 154 GDLANAGGVSNKGGQTGSAI--LDQFGRNLTQEAAEGKLDPVIGRANEIERVMVVLSRRT 211
Query: 63 KNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEER 122
KNNP LIGEPGVGKTA+ EGLAQ+I +GDVP+T++GK+V +LD+G +VAG++YRG+FEER
Sbjct: 212 KNNPVLIGEPGVGKTAVVEGLAQKIHNGDVPETLKGKQVYSLDLGSMVAGSRYRGDFEER 271
Query: 123 LKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEY 182
LKK+++EIK +IILFIDE+HT++GAG+A+GA+ A+++LKP LARGELQ IGATT DEY
Sbjct: 272 LKKVLKEIKTRGDIILFIDEIHTIVGAGSADGALGASDMLKPLLARGELQTIGATTTDEY 331
Query: 183 RKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQ 242
RK+IEKD ALERRFQP++V EP++ +TI+ILKGLR RYE HH + TD+AL SAA+LS +
Sbjct: 332 RKYIEKDAALERRFQPIQVSEPTIAQTIEILKGLRGRYEHHHHVTITDKALQSAAELSAR 391
Query: 243 YISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAG 302
YI DR LPDKAIDLIDEAG+R+R++ P E +EL+ ++ +I+ +K++A++ QDFEKA
Sbjct: 392 YIQDRNLPDKAIDLIDEAGARLRIKRLTAPPELKELDTKVDRISAQKDQAIKDQDFEKAA 451
Query: 303 ELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTD 362
+LRD + L+A+ K KE + E E+ DV VV E I +VS+ TGIPV K++
Sbjct: 452 QLRDSQEKLEAE-----RKEKEKAWHEGES-DVKMVVDEDVIAEVVSSTTGIPVFKLTQA 505
Query: 363 ESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSEL 422
ES +LL ME+ LHKR+IGQDEAV A+SR+IRR RVGLK+P RP SFIF+GPTGVGK+EL
Sbjct: 506 ESKKLLGMEKELHKRIIGQDEAVSALSRSIRRTRVGLKDPKRPAGSFIFAGPTGVGKTEL 565
Query: 423 AKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVV 482
AKALA + F E+A+IR+DMSEF E+++ S+L G+PPGYVGY EGG+LTE VRR+P++VV
Sbjct: 566 AKALAQFLFDDEDALIRVDMSEFSEKYSTSRLFGAPPGYVGYEEGGELTEKVRRKPFSVV 625
Query: 483 LFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGF 542
LFDEIEKAHPD+FN +LQ+L+DG LTD +GR VDFKNT++I+T+N+G+ I K GF
Sbjct: 626 LFDEIEKAHPDIFNTLLQVLDDGHLTDGQGRMVDFKNTIIILTTNLGTRDIAKAA-NTGF 684
Query: 543 DLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVF 602
++ + ++SY R+K VT ELKQ FRPEFLNRLD++IVF+QLT+ +V++I D+ + ++
Sbjct: 685 NVSGN-TETSYQRMKDQVTSELKQQFRPEFLNRLDDIIVFQQLTEPQVRQIVDLDIAQLN 743
Query: 603 DRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDS 662
DRL + + L +T++ ++ + E+G++P GARPLRR I R +ED+++EK+L ++ + +S
Sbjct: 744 DRLFERHMSLDLTDKAKDLLAEKGFDPLLGARPLRRVIQRDIEDAVSEKILMGDLTDNES 803
Query: 663 VIVDVDSDG 671
V VD + +G
Sbjct: 804 VQVDAEGEG 812
>gi|405982742|ref|ZP_11041053.1| hypothetical protein HMPREF9451_00130 [Slackia piriformis YIT
12062]
gi|404389451|gb|EJZ84527.1| hypothetical protein HMPREF9451_00130 [Slackia piriformis YIT
12062]
Length = 856
Score = 771 bits (1991), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/687 (56%), Positives = 517/687 (75%), Gaps = 15/687 (2%)
Query: 1 MVGESTEAVGAGV---GGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQI 57
+VG+ T V AG+ GGG + LEE+GT+LT+ A +GKLDPV+GR +IERV+Q+
Sbjct: 143 LVGQPT-PVAAGLPFFGGGEPQAESSMLEEFGTDLTEKARKGKLDPVIGRAAEIERVMQV 201
Query: 58 LGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRG 117
L RR KNNP LIGEPGVGKTA+ EGLAQ I + VPD I GK+V+TLD+ LVAG+KYRG
Sbjct: 202 LSRRQKNNPLLIGEPGVGKTAVVEGLAQLIVADQVPDIIRGKRVVTLDVSALVAGSKYRG 261
Query: 118 EFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGAT 177
EFEERLKK+++E+ + ILFIDE+HT+IGAG+AEG+IDAA ILKP L+RGE+Q IGAT
Sbjct: 262 EFEERLKKVIKEVVKDGNTILFIDEMHTIIGAGSAEGSIDAAAILKPPLSRGEIQVIGAT 321
Query: 178 TLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAA 237
T++EYRKH+EKD ALERRFQ + V EP+ ++ I+IL GLR+RYE HH +R++DEAL +A
Sbjct: 322 TIEEYRKHLEKDSALERRFQTIVVGEPNEEQAIRILDGLRDRYEAHHHVRFSDEALHAAV 381
Query: 238 QLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQD 297
+LS +YI DRFLPDKAID++DEAG+R+R+R+ LP+E R ++ ELR + EK EA+ QD
Sbjct: 382 KLSNRYIQDRFLPDKAIDVLDEAGARMRIRNRVLPDEVRAIDDELRALRTEKEEAISAQD 441
Query: 298 FEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVE 357
+E+A LRD+E D+ L + + K EA VTE +I +VS TG+PV
Sbjct: 442 YERAASLRDKEKDI------LTRREEAEKKLSEEADRATSEVTEAEIADVVSMSTGVPVS 495
Query: 358 KVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGV 417
++ E+++LL+ME LH+R+IGQ+EAV A+S+AIRR+R GLK+P RP SFIF GP+GV
Sbjct: 496 NLTEAETEKLLRMEGVLHERIIGQEEAVTALSKAIRRSRSGLKDPKRPAGSFIFLGPSGV 555
Query: 418 GKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRR 477
GK+EL+KALA + F SEEA+I DMSE+ME+H+VS+L+GSPPGYVG+ EGGQLT+AVR+R
Sbjct: 556 GKTELSKALAEFLFNSEEALISFDMSEYMEKHSVSRLVGSPPGYVGFDEGGQLTKAVRQR 615
Query: 478 PYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGG 537
PY+VVLFDEIEKAHPDVFN++LQILE+GRLTDS+GR+VDF+NT++IMTSNVG+ I +G
Sbjct: 616 PYSVVLFDEIEKAHPDVFNILLQILEEGRLTDSQGRSVDFRNTVIIMTSNVGAREIAQGA 675
Query: 538 RRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIM 597
+GF D + S IKS V E+K+ FRPEFLNRLDE+IVF+ LT E+ +I D+M
Sbjct: 676 -PLGFAPD-SQAGLSDKEIKSRVMSEMKKLFRPEFLNRLDEIIVFKSLTAEEIGQIVDLM 733
Query: 598 LKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREI 657
+ ++ DRL +D+ + +T R+ + EEG + S GARPLRRAI RLLED +AE++L
Sbjct: 734 VADLRDRLIAQDMTINLTPAARKHIAEEGTDTSMGARPLRRAIQRLLEDEIAEQILEGRW 793
Query: 658 KEGDSVIVDVD-SDGNVTVLNGSSGAP 683
G ++DVD DG + G P
Sbjct: 794 HAGS--VIDVDFVDGKLVFSEGEGEIP 818
>gi|453073740|ref|ZP_21976539.1| DNA binding ATP-dependent peptidase [Rhodococcus triatomae BKS
15-14]
gi|452765766|gb|EME24020.1| DNA binding ATP-dependent peptidase [Rhodococcus triatomae BKS
15-14]
Length = 849
Score = 771 bits (1990), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/691 (56%), Positives = 524/691 (75%), Gaps = 20/691 (2%)
Query: 8 AVGAGVGGGSSGNKMPTL--EEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNN 65
A GAG G +G +L +++G NLT+ A EGKLDPV+GR +IERV+Q+L RRTKNN
Sbjct: 151 AEGAGTSRGEAGTPSTSLVLDQFGRNLTQAALEGKLDPVIGRSKEIERVMQVLSRRTKNN 210
Query: 66 PCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKK 125
P LIGEPGVGKTA+ EGLAQ I +G+VP+T++ K++ TLD+G LVAG++YRG+FEERLKK
Sbjct: 211 PVLIGEPGVGKTAVVEGLAQAIVNGEVPETLKDKQLYTLDLGSLVAGSRYRGDFEERLKK 270
Query: 126 LMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKH 185
+++EI +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEYRK+
Sbjct: 271 VLKEINTRGDIILFIDELHTLVGAGAAEGAIDAASILKPKLARGELQTIGATTLDEYRKY 330
Query: 186 IEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYIS 245
IEKD ALERRFQPV+V EP+V+ TI+ILKGLR+RYE HH++ TD ALV+AA L+ +YI+
Sbjct: 331 IEKDAALERRFQPVQVGEPTVEHTIEILKGLRDRYEAHHRVSITDGALVAAATLADRYIN 390
Query: 246 DRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELR 305
DRFLPDKAIDLIDEAG+R+R+R P + RE + ++ +EK A+ QDFEKA LR
Sbjct: 391 DRFLPDKAIDLIDEAGARMRIRRMTAPPDLREFDDKIADARREKESAIDAQDFEKAASLR 450
Query: 306 DREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKVSTD 362
D+E L AQ + + + +GD+ V+ EVD I ++ WTGIPV K++ +
Sbjct: 451 DKEKQLVAQ--------RAEREKQWRSGDL-DVIAEVDDEQIAEVLGNWTGIPVFKLTEE 501
Query: 363 ESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSEL 422
E+ RLL+MEE LHKR+IGQ++AVKA+S+AIRR R GLK+P RP SFIF+GP+GVGK+EL
Sbjct: 502 ETTRLLRMEEELHKRIIGQEDAVKAVSKAIRRTRAGLKDPKRPSGSFIFAGPSGVGKTEL 561
Query: 423 AKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVV 482
+KALA + FG ++A+I++DM EF +R T S+L G+PPGYVGY EGGQLTE VRR+P++VV
Sbjct: 562 SKALANFLFGEDDALIQIDMGEFHDRFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 621
Query: 483 LFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGF 542
LFDEIEKAH +++N +LQ+LEDGRLTD +GRTVDFKNT+LI TSN+G+S I K
Sbjct: 622 LFDEIEKAHQEIYNTLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGTSDISKAVGLG-- 679
Query: 543 DLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVF 602
+S+Y R+K+ V +ELK++FRPEFLNR+D++IVF QLT+ ++ E+ D+M+ V
Sbjct: 680 FSSGSGSESNYERMKNKVHDELKKHFRPEFLNRIDDIIVFHQLTQEQIIEMVDLMIGRVE 739
Query: 603 DRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDS 662
+LK KD+++++TE+ + + + G++P GARPLRR I R +ED ++EK+L E+ G
Sbjct: 740 KQLKNKDMDIELTEQAKSLLAKRGFDPVLGARPLRRTIQREIEDQLSEKILFNELGPGQI 799
Query: 663 VIVDVDS-DGNVTVLNGS---SGAPESLADP 689
V+VDV+ DG + N +G P+ + P
Sbjct: 800 VLVDVEGWDGEGSGENAKFVFTGTPKPVNVP 830
>gi|310287202|ref|YP_003938460.1| ATP-dependent clp protease [Bifidobacterium bifidum S17]
gi|311064064|ref|YP_003970789.1| genetic competence regulator ClpC [Bifidobacterium bifidum PRL2010]
gi|421734040|ref|ZP_16173129.1| genetic competence regulator ClpC [Bifidobacterium bifidum LMG
13195]
gi|421737399|ref|ZP_16176009.1| genetic competence regulator ClpC [Bifidobacterium bifidum IPLA
20015]
gi|309251138|gb|ADO52886.1| ATP-dependent clp protease [Bifidobacterium bifidum S17]
gi|310866383|gb|ADP35752.1| ClpC Negative regulator of genetic competence [Bifidobacterium
bifidum PRL2010]
gi|407078036|gb|EKE50853.1| genetic competence regulator ClpC [Bifidobacterium bifidum LMG
13195]
gi|407295316|gb|EKF15088.1| genetic competence regulator ClpC [Bifidobacterium bifidum IPLA
20015]
Length = 858
Score = 771 bits (1990), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 383/669 (57%), Positives = 518/669 (77%), Gaps = 8/669 (1%)
Query: 3 GESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRT 62
G+ A GV S L+++G NLT A EGKLDPV+GR +IERV+ +L RRT
Sbjct: 153 GKGDLANAGGVQDKRSQTGSAILDQFGRNLTAEAAEGKLDPVIGRTNEIERVMVVLSRRT 212
Query: 63 KNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEER 122
KNNP LIGEPGVGKTA+ EGLAQ+I +GDVP+T++ K+V +LD+G +VAG++YRG+FEER
Sbjct: 213 KNNPVLIGEPGVGKTAVVEGLAQKINAGDVPETLKDKQVYSLDLGSMVAGSRYRGDFEER 272
Query: 123 LKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEY 182
LKK+++EIK +I+LFIDE+HT++GAG+A+GA+ A+++LKP LARGELQ IGATT DEY
Sbjct: 273 LKKVLKEIKTRGDIVLFIDEIHTIVGAGSADGALGASDMLKPMLARGELQTIGATTTDEY 332
Query: 183 RKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQ 242
RK+IEKD ALERRFQP++V EP++ ETI+ILKGLR RYE HH + TD AL SAA+LS +
Sbjct: 333 RKYIEKDAALERRFQPIQVHEPTIAETIEILKGLRSRYENHHHVTITDGALQSAAELSSR 392
Query: 243 YISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAG 302
YI DR LPDKAIDLIDEAG+R+R++ P E +EL++++ ++ EK++A++ QDFEKA
Sbjct: 393 YIQDRNLPDKAIDLIDEAGARLRIKRLTAPPELKELDQKVAKVAAEKDKAIKDQDFEKAA 452
Query: 303 ELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTD 362
ELRD + L+A+ K KE S E E+ DV VV E I ++S+ TGIPV K++
Sbjct: 453 ELRDNQEKLEAE-----RKEKESSWREGES-DVEMVVNEDVIAQVISSTTGIPVFKLTQA 506
Query: 363 ESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSEL 422
ES +LL ME LHKR+IGQDEAV A+SR+IRR RVGLK+P RP SFIF+GPTGVGK+EL
Sbjct: 507 ESKKLLGMESELHKRIIGQDEAVSALSRSIRRTRVGLKDPKRPAGSFIFAGPTGVGKTEL 566
Query: 423 AKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVV 482
AKALA + F E+A+IR+DMSEF E++ S+L G+PPGYVGY EGG+LTE VRR+P++VV
Sbjct: 567 AKALAEFLFDDEDALIRVDMSEFSEKYAASRLFGAPPGYVGYEEGGELTEKVRRKPFSVV 626
Query: 483 LFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGF 542
LFDEIEKAHPD+FN +LQ+L+DG LTD +GR VDFKNT++I+T+N+G+ I K GF
Sbjct: 627 LFDEIEKAHPDIFNTLLQVLDDGHLTDGQGRKVDFKNTIIILTTNLGTRDIAKAA-NTGF 685
Query: 543 DLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVF 602
+L + +SSY R+K V+ ELKQ FRPEFLNRLD++IVFRQLT+ +V++I D+ +K++
Sbjct: 686 NLGSN-AESSYQRMKDQVSSELKQQFRPEFLNRLDDIIVFRQLTEPQVRQIVDLDIKQLN 744
Query: 603 DRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDS 662
DRL + + L++T ++ + ++G++P GARPLRR I R +ED+++EK+L E+++G
Sbjct: 745 DRLFDRHMSLELTPAAKDLLAQKGFDPLLGARPLRRVIQRDIEDAISEKILMGELEDGQR 804
Query: 663 VIVDVDSDG 671
V+VD + +G
Sbjct: 805 VVVDSEGEG 813
>gi|375102873|ref|ZP_09749136.1| ATPase with chaperone activity, ATP-binding subunit
[Saccharomonospora cyanea NA-134]
gi|374663605|gb|EHR63483.1| ATPase with chaperone activity, ATP-binding subunit
[Saccharomonospora cyanea NA-134]
Length = 850
Score = 771 bits (1990), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/669 (56%), Positives = 517/669 (77%), Gaps = 15/669 (2%)
Query: 3 GESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRT 62
G+ GAG G G+ + + L+++G NLT A E KLDPV+GR +IERV+Q+L RRT
Sbjct: 147 GKEPAEAGAGRGEGTPSSSL-VLDQFGRNLTAAARENKLDPVIGRNKEIERVMQVLSRRT 205
Query: 63 KNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEER 122
KNNP LIGEPGVGKTA+ EGLAQ I G+VP+T++ K++ TLD+G LVAG++YRG+FEER
Sbjct: 206 KNNPVLIGEPGVGKTAVVEGLAQNIVKGEVPETLKDKQLYTLDLGSLVAGSRYRGDFEER 265
Query: 123 LKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEY 182
LKK+++EIK +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTL+EY
Sbjct: 266 LKKVLKEIKTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIGATTLEEY 325
Query: 183 RKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQ 242
RK+IEKD ALERRFQP++V EPS++ TI+ILKGLR+RYE HH++ TD ALV+AA L+ +
Sbjct: 326 RKYIEKDAALERRFQPIQVGEPSLEHTIEILKGLRDRYEAHHRVSITDSALVAAATLADR 385
Query: 243 YISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAG 302
YI+DR+LPDKAIDLIDEAG+R+R+R P + RE ++++ + +EK A+ QDFE+A
Sbjct: 386 YINDRYLPDKAIDLIDEAGARMRIRRMTAPPDLREFDEKIADVRREKESAIDAQDFERAA 445
Query: 303 ELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKV 359
LRD E L Q K + + + GD+ VV EVD I +++ WTGIPV K+
Sbjct: 446 RLRDEEKTLLGQ--------KAEREKQWKDGDL-DVVAEVDDEQIAEVLANWTGIPVFKL 496
Query: 360 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 419
+ +E+ RLL+ME+ LHKR+IGQ++AVKA+S+AIRR R GLK+P RP SFIF+GP+GVGK
Sbjct: 497 TEEETTRLLRMEDELHKRIIGQEDAVKAVSQAIRRTRAGLKDPKRPSGSFIFAGPSGVGK 556
Query: 420 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 479
+EL+KALA + FG ++A+I++DM EF +R+T S+L G+PPGYVGY EGGQLTE VRR+P+
Sbjct: 557 TELSKALANFLFGEDDALIQIDMGEFHDRYTASRLFGAPPGYVGYEEGGQLTEKVRRKPF 616
Query: 480 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 539
+VVLFDEIEKAH +++N +LQ+LEDGRLTD +GRTVDFKNT+LI TSN+G+ I K
Sbjct: 617 SVVLFDEIEKAHQEIYNTLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGTQDISK-SVS 675
Query: 540 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 599
+GF DE Y ++K V EE+K++FRPEFLNR+D++IVF QLT+ ++ ++ D+M+
Sbjct: 676 LGFSSGADET-GRYEKMKQKVNEEMKKHFRPEFLNRIDDIIVFHQLTQEQIIQMVDLMVS 734
Query: 600 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 659
V ++LK KD+ L++T++ + + + G++P GARPLRR I R +ED ++EK+L E++
Sbjct: 735 RVEEQLKAKDMALELTDKAKALLAKRGFDPVLGARPLRRTIQREIEDQLSEKILFGEVQP 794
Query: 660 GDSVIVDVD 668
G +IVDV+
Sbjct: 795 GQIIIVDVE 803
>gi|376252008|ref|YP_005138889.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
diphtheriae HC03]
gi|372113512|gb|AEX79571.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
diphtheriae HC03]
Length = 878
Score = 771 bits (1990), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 383/674 (56%), Positives = 515/674 (76%), Gaps = 17/674 (2%)
Query: 24 TLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGL 83
L+++G NLT+ A+EGKLDPVVGR+ +IER++Q+L RRTKNNP LIGEPGVGKTA+ EGL
Sbjct: 183 VLDQFGRNLTQAAKEGKLDPVVGREQEIERIMQVLSRRTKNNPVLIGEPGVGKTAVVEGL 242
Query: 84 AQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEV 143
A I +G VP+T++ K+V +LD+G LVAG++YRG+FEERLKK+++EI Q +IILFIDE+
Sbjct: 243 ALDIVNGKVPETLKDKQVYSLDLGSLVAGSRYRGDFEERLKKVLKEINQRGDIILFIDEI 302
Query: 144 HTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPE 203
HTL+GAGAAEGAIDAA++LKP LARGELQ IGATTLDEYRKHIEKD ALERRFQPV+VPE
Sbjct: 303 HTLVGAGAAEGAIDAASLLKPKLARGELQTIGATTLDEYRKHIEKDAALERRFQPVQVPE 362
Query: 204 PSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSR 263
PSVD TI+ILKGLR+RYE HH++ TD AL +AAQLS +YI+DRFLPDKA+DLIDEAG+R
Sbjct: 363 PSVDMTIEILKGLRDRYEAHHRVSITDGALAAAAQLSDRYINDRFLPDKAVDLIDEAGAR 422
Query: 264 VRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGK 323
+R++ PE R+++ ++ ++ +EK A+ QDFEKA LRD E L G+
Sbjct: 423 MRIKRMTAPESIRKVDDQIAEVRREKEAAIDAQDFEKAAGLRDTERKL----------GE 472
Query: 324 EMSKAETE--AGDVGPV--VTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVI 379
E ++ E + +GD+ + V E I ++ WTGIPV K++ +ES RLL MEE LHKR+I
Sbjct: 473 ERAEKEKQWRSGDLEDIAEVGEEQIAEVLGNWTGIPVFKLTEEESSRLLHMEEELHKRII 532
Query: 380 GQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIR 439
GQD+AVK++SRAIRR R GLK+P RP SFIF+GP+GVGK+EL+K+LA + FG ++A+I+
Sbjct: 533 GQDDAVKSVSRAIRRTRAGLKDPRRPSGSFIFAGPSGVGKTELSKSLANFLFGDDDALIQ 592
Query: 440 LDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMML 499
+DM EF +R T S+L G+PPGYVGY EGGQLTE VRR+P++VVLFDEIEKAH +++N +L
Sbjct: 593 IDMGEFHDRFTASRLFGAPPGYVGYDEGGQLTEKVRRKPFSVVLFDEIEKAHKEIYNTLL 652
Query: 500 QILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGF-DLDYDEKDSSYNRIKS 558
Q+LE+GRLTD +GR VDFKNT+LI TSN+G+ I K +GF + + D Y+R+K
Sbjct: 653 QVLEEGRLTDGQGRVVDFKNTVLIFTSNLGTQDISK-AVGMGFSSVSEHDADGQYDRMKQ 711
Query: 559 LVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERF 618
V +ELK++FRPEFLNR+DE++VF QLT+ ++ E+ D+++ V L KD+ +++TE+
Sbjct: 712 KVNDELKKHFRPEFLNRIDEIVVFHQLTQEQIVEMVDLLIGRVSKALAQKDMGIELTEKA 771
Query: 619 RERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDS-DGNVTVLN 677
+ + + G++P GARPLRR I R +ED ++EK+L E+ G+ V VDV+ DG +
Sbjct: 772 KNLLAKRGFDPVLGARPLRRTIQREIEDVLSEKILFGEVGAGEIVTVDVEGWDGESKETD 831
Query: 678 GSSGAPESLADPLP 691
+S PLP
Sbjct: 832 KASFTFTPRVKPLP 845
>gi|326383982|ref|ZP_08205665.1| ATPase AAA-2 domain-containing protein [Gordonia neofelifaecis NRRL
B-59395]
gi|326197142|gb|EGD54333.1| ATPase AAA-2 domain-containing protein [Gordonia neofelifaecis NRRL
B-59395]
Length = 846
Score = 771 bits (1990), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 394/672 (58%), Positives = 517/672 (76%), Gaps = 18/672 (2%)
Query: 4 ESTEAVGAGVGGGSSGNKMPT----LEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 59
+ E AG G SS P+ L+++G NLT A EGKLDPV+GR+ +IERV+Q+L
Sbjct: 146 QGKEPAEAGTGARSSEAGTPSTSLVLDQFGRNLTTAASEGKLDPVIGREKEIERVMQVLS 205
Query: 60 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 119
RRTKNNP LIGEPGVGKTA+ EGLAQ I +G+VP+T++ K++ TLD+G LVAG++YRG+F
Sbjct: 206 RRTKNNPVLIGEPGVGKTAVVEGLAQAIVNGNVPETLKDKQLYTLDLGSLVAGSRYRGDF 265
Query: 120 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 179
EERLKK+++EI +IILFIDE+H L+GAGAAEGAIDAA+ILKP LARGELQ IGATTL
Sbjct: 266 EERLKKVLKEINTRGDIILFIDELHQLVGAGAAEGAIDAASILKPKLARGELQTIGATTL 325
Query: 180 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 239
DEYRK+IEKD ALERRFQPV+V EPSV+ TI+ILKGLR+RYE HHK+ TD AL +AA L
Sbjct: 326 DEYRKYIEKDAALERRFQPVQVGEPSVEHTIEILKGLRDRYEQHHKVSITDGALAAAATL 385
Query: 240 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 299
+ +YI+DRFLPDKAIDLIDEAG+R+R+R P + RE + + KEK A+ QDFE
Sbjct: 386 ADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPDLREFDDRIADARKEKESAIDAQDFE 445
Query: 300 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPV 356
KA LRD+E LV + E K + AGD+ VV EV+ I ++ WTGIPV
Sbjct: 446 KAASLRDKE-------KQLVGERAEREK-QWRAGDL-DVVAEVNDEEIAEVLGNWTGIPV 496
Query: 357 EKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTG 416
K++ +E+ RLL+ME+ LHKR+IGQ +AV A+SRAIRR R GLK+P RP SFIF+GP+G
Sbjct: 497 FKLTEEETTRLLRMEDELHKRIIGQQDAVAAVSRAIRRTRAGLKDPKRPSGSFIFAGPSG 556
Query: 417 VGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRR 476
VGK+EL+KALA + FG ++A+I++DM EF +R T S+L G+PPGYVGY EGGQLTE VRR
Sbjct: 557 VGKTELSKALANFLFGEDDALIQIDMGEFHDRFTASRLFGAPPGYVGYDEGGQLTEKVRR 616
Query: 477 RPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKG 536
+P++VVLFDEIEKAHP+++N +LQ+LEDGRLTD +GRTVDFKNT+LI TSN+G+S I K
Sbjct: 617 KPFSVVLFDEIEKAHPEIYNTLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGTSDISK- 675
Query: 537 GRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADI 596
+GF D D + S+Y+R+K V +ELK++FRPEFLNR+D++IVF QLT+ E+ ++ D+
Sbjct: 676 AVGMGFSKD-DGRGSNYDRMKQKVNDELKKHFRPEFLNRIDDIIVFHQLTQDEIIQMVDL 734
Query: 597 MLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLARE 656
M+ V +LK KD++L++TE+ + + + G++P GARPLRR I R +ED ++EK+L E
Sbjct: 735 MIGRVEAQLKNKDMDLELTEKAKNLLAKRGFDPVLGARPLRRTIQREIEDQLSEKILFEE 794
Query: 657 IKEGDSVIVDVD 668
IK G V++DV+
Sbjct: 795 IKAGQIVVIDVE 806
>gi|332295625|ref|YP_004437548.1| ATPase AAA [Thermodesulfobium narugense DSM 14796]
gi|332178728|gb|AEE14417.1| ATPase AAA-2 domain protein [Thermodesulfobium narugense DSM 14796]
Length = 800
Score = 771 bits (1990), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/650 (57%), Positives = 508/650 (78%), Gaps = 16/650 (2%)
Query: 21 KMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIA 80
K LE+Y NLT+LA EGKLDPV+GR +IERV+QIL RRTKNNP LIGEPGVGKTAI
Sbjct: 160 KYQALEKYTRNLTQLALEGKLDPVIGRDEEIERVMQILSRRTKNNPVLIGEPGVGKTAIV 219
Query: 81 EGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFI 140
+G+AQ+IAS DVP+ ++GK+++ LDMG L+AGTK+RGEFEERLK +++ + ++ ILFI
Sbjct: 220 DGIAQKIASNDVPEILKGKQLLALDMGALIAGTKFRGEFEERLKTIIDSVTKTQNYILFI 279
Query: 141 DEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVK 200
DE+HT++GAGAAEGAIDA+N+LKP+LARGEL+ IGATTLDEY+K+IEKDPALERRFQPV
Sbjct: 280 DELHTVVGAGAAEGAIDASNLLKPALARGELRVIGATTLDEYKKYIEKDPALERRFQPVF 339
Query: 201 VPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEA 260
V EPSVD+TI ILKGLR++YE HH+++ TDEA+ SAA LS +YISDRFLPDKAIDLIDEA
Sbjct: 340 VKEPSVDDTISILKGLRDKYEAHHRVKITDEAIESAAHLSERYISDRFLPDKAIDLIDEA 399
Query: 261 GSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVD 320
++VR++ + +P E +E+E +L ++ +E EAV+ +D+E A + LK++ AL
Sbjct: 400 AAKVRIQLSNMPTELKEMENKLSRLYQEGQEAVKREDYELAAK-------LKSESEALSK 452
Query: 321 KGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIG 380
+ KE V VV + DI ++VS WTGIPV ++ +E D+L ME LHKR+IG
Sbjct: 453 EFKEKRDKWLIDKKVNEVVDKEDIANLVSKWTGIPVTELVQEEVDKLTNMESILHKRIIG 512
Query: 381 QDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRL 440
QDEAV A+S AIRR+R GLK+P RP+ SF+F GPTGVGK+EL+KALAA+ F E A++R+
Sbjct: 513 QDEAVVAVSEAIRRSRSGLKDPRRPVGSFLFLGPTGVGKTELSKALAAFLFKDENALVRI 572
Query: 441 DMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQ 500
DMSE+ME+H+VS+L+G+PPGYVGY EGGQLTE +RRRPY+V+L DEIEKAHPDVFN++LQ
Sbjct: 573 DMSEYMEKHSVSRLVGAPPGYVGYEEGGQLTEVIRRRPYSVILLDEIEKAHPDVFNILLQ 632
Query: 501 ILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLV 560
+L+DGRLTD KGRT+DF+NT++IMTSN+GS ++ D E + + NR+ SL
Sbjct: 633 VLDDGRLTDGKGRTIDFRNTVIIMTSNLGSDILLNSNVE-----DEREFEKAKNRVLSL- 686
Query: 561 TEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRE 620
L FRPEFLNR+DE++VF+ L++ ++++I +++L ++ +RL K I+L +TE ++
Sbjct: 687 ---LNSTFRPEFLNRIDEIVVFKPLSRSDIEKIVELILNDIQERLNEKKIKLILTEEAKK 743
Query: 621 RVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSD 670
+EGY P+ GARPL+R I + LE+ +A+++L +IKEGD+V + VD++
Sbjct: 744 FFAKEGYEPTMGARPLKRYIQKNLENLIAKELLNNKIKEGDTVKIVVDNN 793
>gi|313139902|ref|ZP_07802095.1| ClpC [Bifidobacterium bifidum NCIMB 41171]
gi|313132412|gb|EFR50029.1| ClpC [Bifidobacterium bifidum NCIMB 41171]
Length = 867
Score = 770 bits (1989), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 383/669 (57%), Positives = 518/669 (77%), Gaps = 8/669 (1%)
Query: 3 GESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRT 62
G+ A GV S L+++G NLT A EGKLDPV+GR +IERV+ +L RRT
Sbjct: 162 GKGDLANAGGVQDKRSQTGSAILDQFGRNLTAEAAEGKLDPVIGRTNEIERVMVVLSRRT 221
Query: 63 KNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEER 122
KNNP LIGEPGVGKTA+ EGLAQ+I +GDVP+T++ K+V +LD+G +VAG++YRG+FEER
Sbjct: 222 KNNPVLIGEPGVGKTAVVEGLAQKINAGDVPETLKDKQVYSLDLGSMVAGSRYRGDFEER 281
Query: 123 LKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEY 182
LKK+++EIK +I+LFIDE+HT++GAG+A+GA+ A+++LKP LARGELQ IGATT DEY
Sbjct: 282 LKKVLKEIKTRGDIVLFIDEIHTIVGAGSADGALGASDMLKPMLARGELQTIGATTTDEY 341
Query: 183 RKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQ 242
RK+IEKD ALERRFQP++V EP++ ETI+ILKGLR RYE HH + TD AL SAA+LS +
Sbjct: 342 RKYIEKDAALERRFQPIQVHEPTIAETIEILKGLRSRYENHHHVTITDGALQSAAELSSR 401
Query: 243 YISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAG 302
YI DR LPDKAIDLIDEAG+R+R++ P E +EL++++ ++ EK++A++ QDFEKA
Sbjct: 402 YIQDRNLPDKAIDLIDEAGARLRIKRLTAPPELKELDQKVAKVAAEKDKAIKDQDFEKAA 461
Query: 303 ELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTD 362
ELRD + L+A+ K KE S E E+ DV VV E I ++S+ TGIPV K++
Sbjct: 462 ELRDNQEKLEAE-----RKEKESSWREGES-DVEMVVNEDVIAQVISSTTGIPVFKLTQA 515
Query: 363 ESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSEL 422
ES +LL ME LHKR+IGQDEAV A+SR+IRR RVGLK+P RP SFIF+GPTGVGK+EL
Sbjct: 516 ESKKLLGMESELHKRIIGQDEAVSALSRSIRRTRVGLKDPKRPAGSFIFAGPTGVGKTEL 575
Query: 423 AKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVV 482
AKALA + F E+A+IR+DMSEF E++ S+L G+PPGYVGY EGG+LTE VRR+P++VV
Sbjct: 576 AKALAEFLFDDEDALIRVDMSEFSEKYAASRLFGAPPGYVGYEEGGELTEKVRRKPFSVV 635
Query: 483 LFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGF 542
LFDEIEKAHPD+FN +LQ+L+DG LTD +GR VDFKNT++I+T+N+G+ I K GF
Sbjct: 636 LFDEIEKAHPDIFNTLLQVLDDGHLTDGQGRKVDFKNTIIILTTNLGTRDIAKAA-NTGF 694
Query: 543 DLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVF 602
+L + +SSY R+K V+ ELKQ FRPEFLNRLD++IVFRQLT+ +V++I D+ +K++
Sbjct: 695 NLGSN-AESSYQRMKDQVSSELKQQFRPEFLNRLDDIIVFRQLTEPQVRQIVDLDIKQLN 753
Query: 603 DRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDS 662
DRL + + L++T ++ + ++G++P GARPLRR I R +ED+++EK+L E+++G
Sbjct: 754 DRLFDRHMSLELTPAAKDLLAQKGFDPLLGARPLRRVIQRDIEDAISEKILMGELEDGQR 813
Query: 663 VIVDVDSDG 671
V+VD + +G
Sbjct: 814 VVVDSEGEG 822
>gi|386356248|ref|YP_006054494.1| ATP-dependent Clp protease [Streptomyces cattleya NRRL 8057 = DSM
46488]
gi|365806756|gb|AEW94972.1| putative ATP-dependent Clp protease [Streptomyces cattleya NRRL
8057 = DSM 46488]
Length = 843
Score = 770 bits (1989), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/687 (57%), Positives = 526/687 (76%), Gaps = 16/687 (2%)
Query: 11 AGVGGGSSGNKMPTL--EEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCL 68
A GG + G +L +++G NLT+ A E KLDPV+GR+ +IERV+Q+L RRTKNNP L
Sbjct: 152 ATAGGPAEGTPSTSLVLDQFGRNLTQAARETKLDPVIGREKEIERVMQVLSRRTKNNPVL 211
Query: 69 IGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLME 128
IGEPGVGKTA+ EGLAQ I G+VP+T++ K++ TLD+G LVAG++YRG+FEERLKK+++
Sbjct: 212 IGEPGVGKTAVVEGLAQAIVKGEVPETLKDKQLYTLDLGALVAGSRYRGDFEERLKKVLK 271
Query: 129 EIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEK 188
EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEYRKH+EK
Sbjct: 272 EIRTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIGATTLDEYRKHLEK 331
Query: 189 DPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRF 248
D ALERRFQP++V EPS+ TI+ILKGLR+RYE HH++ TD ALV+AA L+ +YISDRF
Sbjct: 332 DAALERRFQPIQVAEPSLPHTIEILKGLRDRYEAHHRVSITDAALVAAATLADRYISDRF 391
Query: 249 LPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDRE 308
LPDKAIDLIDEAGSR+R+R P + RE ++++ + +EK A+ QDFEKA LRD+E
Sbjct: 392 LPDKAIDLIDEAGSRMRIRRMTAPPDLREFDEKIADVRREKESAIDSQDFEKAASLRDKE 451
Query: 309 MDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKVSTDESD 365
L A K + E +AGD+ VV EVD I +++ TGIPV K++ +ES
Sbjct: 452 KQLLA--------AKTKREKEWKAGDM-DVVAEVDEELIAEVLATATGIPVFKLTEEESS 502
Query: 366 RLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKA 425
RLL+ME+ LHKRVIGQ +A+KA+S+AIRR R GLK+P RP SFIF+GP+GVGK+EL+K
Sbjct: 503 RLLRMEDELHKRVIGQKDAIKALSQAIRRTRAGLKDPKRPGGSFIFAGPSGVGKTELSKT 562
Query: 426 LAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFD 485
LA + FG E+A+I+LDMSEF E+HTVS+L GSPPGYVGY EGGQLTE VRR+P++VVLFD
Sbjct: 563 LAEFLFGDEDALIQLDMSEFSEKHTVSRLFGSPPGYVGYEEGGQLTEKVRRKPFSVVLFD 622
Query: 486 EIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLD 545
E+EKAHPD+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N+G+ I K G +GF
Sbjct: 623 EVEKAHPDIFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNLGTRDISK-GFNLGFAAA 681
Query: 546 YDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRL 605
D K + Y R+K+ V EELKQ+FRPEFLNR+D+++VF QLT+ ++ +I D+M+ V +RL
Sbjct: 682 GDVK-TGYERMKAKVGEELKQHFRPEFLNRVDDIVVFHQLTEDDIIQIVDLMIARVDERL 740
Query: 606 KTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIV 665
K +D+ ++++ ++ + ++GY+P GARPLRR I R +ED ++EK+L E++ G V+V
Sbjct: 741 KDRDMGIELSPEAKKLLAKKGYDPILGARPLRRTIQREIEDQLSEKILFNELRPGHIVVV 800
Query: 666 DVDSDGNVTVLNGSSGAPESLADPLPV 692
+ +G ++AD P+
Sbjct: 801 GTEGEGEEKKFTFRGEEKVTVADAPPI 827
>gi|373106264|ref|ZP_09520567.1| hypothetical protein HMPREF9623_00231 [Stomatobaculum longum]
gi|371652639|gb|EHO18047.1| hypothetical protein HMPREF9623_00231 [Stomatobaculum longum]
Length = 839
Score = 770 bits (1989), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/657 (57%), Positives = 517/657 (78%), Gaps = 10/657 (1%)
Query: 10 GAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLI 69
G+GV GS+ PTL++Y +LT+ A +GKLDPV+GR +++RV+QIL RRTKNNPCLI
Sbjct: 158 GSGVVSGSA-QPTPTLDQYSRDLTEFARQGKLDPVIGRSVEMQRVMQILSRRTKNNPCLI 216
Query: 70 GEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEE 129
GEPGVGKTA+ EGLAQ I SG+VP+T+ K+++TLD+ ++AG+KYRGEFEER+KK+++E
Sbjct: 217 GEPGVGKTAVVEGLAQLIVSGEVPETLADKRLVTLDLSGMIAGSKYRGEFEERIKKVLQE 276
Query: 130 IKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKD 189
+ Q+ ++LFIDE+HT+IGAG+AEG +DA+NILKPSLARGELQ IGATT++EYRKHIEKD
Sbjct: 277 VMQAGNVLLFIDEIHTIIGAGSAEGTMDASNILKPSLARGELQLIGATTIEEYRKHIEKD 336
Query: 190 PALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFL 249
ALERRFQP+ V EPS DE+++IL+GLR RYE HHK+ TD A+ A QLS +YISDRFL
Sbjct: 337 AALERRFQPITVDEPSEDESVRILEGLRPRYEAHHKVSITDTAIKEAVQLSARYISDRFL 396
Query: 250 PDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREM 309
PDKAIDLIDEA SR+RL P E ++L +E+ ++ +K EAVR ++FE+AG+L+ ++
Sbjct: 397 PDKAIDLIDEAASRLRLADYAEPAEIKKLSEEITKLESQKEEAVRAEEFERAGQLKKKQE 456
Query: 310 DLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLK 369
+ +I+ + ++ + + D VV E ++ +VS WT IPV+K++ +E++RL K
Sbjct: 457 KKEEKIAKIKEEWIKARR------DKKLVVGENEVADVVSLWTRIPVKKLTEEENERLKK 510
Query: 370 MEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAY 429
+E LH+RVIGQDEAV A+SRAIRR RVGLK+P+RPI SF+F GPTGVGK+EL+KALA
Sbjct: 511 LESVLHERVIGQDEAVSAVSRAIRRGRVGLKDPHRPIGSFLFLGPTGVGKTELSKALAEA 570
Query: 430 YFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEK 489
FG+E+A+IR+DMSE+ME+H+VSK++GSPPGYVGY EGGQL+E VRR PY+V+LFDEIEK
Sbjct: 571 MFGTEQALIRVDMSEYMEKHSVSKIVGSPPGYVGYEEGGQLSEKVRRNPYSVILFDEIEK 630
Query: 490 AHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEK 549
AHPDVFN++LQ+L+DG +TDS+GR +DFKNT+LIMTSN G+S I + +GF + K
Sbjct: 631 AHPDVFNILLQVLDDGHITDSQGRKIDFKNTVLIMTSNAGASRI-VSPKTLGF-AARENK 688
Query: 550 DSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTK- 608
++ Y +K V +E+++ F+PEFLNR+DE++VF QL + +K+I DI+L + R +++
Sbjct: 689 ETDYKNMKDGVMDEVRRLFKPEFLNRIDEIVVFHQLDRDNMKQIVDILLGNIEKRSESQM 748
Query: 609 DIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIV 665
+I+L + RE ++E+GY+P YGARPLRRAI LED +AE ML ++K GD V+V
Sbjct: 749 EIKLSFEDAAREFLIEKGYDPKYGARPLRRAIQNELEDKLAEAMLDDKVKAGDEVLV 805
>gi|375291593|ref|YP_005126133.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
diphtheriae 241]
gi|376246431|ref|YP_005136670.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
diphtheriae HC01]
gi|376249217|ref|YP_005141161.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
diphtheriae HC04]
gi|376285444|ref|YP_005158654.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
diphtheriae 31A]
gi|376293971|ref|YP_005165645.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
diphtheriae HC02]
gi|419861512|ref|ZP_14384144.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
diphtheriae bv. intermedius str. NCTC 5011]
gi|371578959|gb|AEX42627.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
diphtheriae 31A]
gi|371581264|gb|AEX44931.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
diphtheriae 241]
gi|372109061|gb|AEX75122.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
diphtheriae HC01]
gi|372111294|gb|AEX77354.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
diphtheriae HC02]
gi|372115785|gb|AEX81843.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
diphtheriae HC04]
gi|387981983|gb|EIK55504.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
diphtheriae bv. intermedius str. NCTC 5011]
Length = 878
Score = 770 bits (1989), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 383/674 (56%), Positives = 515/674 (76%), Gaps = 17/674 (2%)
Query: 24 TLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGL 83
L+++G NLT+ A+EGKLDPVVGR+ +IER++Q+L RRTKNNP LIGEPGVGKTA+ EGL
Sbjct: 183 VLDQFGRNLTQAAKEGKLDPVVGREQEIERIMQVLSRRTKNNPVLIGEPGVGKTAVVEGL 242
Query: 84 AQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEV 143
A I +G VP+T++ K+V +LD+G LVAG++YRG+FEERLKK+++EI Q +IILFIDE+
Sbjct: 243 ALDIVNGKVPETLKDKQVYSLDLGSLVAGSRYRGDFEERLKKVLKEINQRGDIILFIDEI 302
Query: 144 HTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPE 203
HTL+GAGAAEGAIDAA++LKP LARGELQ IGATTLDEYRKHIEKD ALERRFQPV+VPE
Sbjct: 303 HTLVGAGAAEGAIDAASLLKPKLARGELQTIGATTLDEYRKHIEKDAALERRFQPVQVPE 362
Query: 204 PSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSR 263
PSVD TI+ILKGLR+RYE HH++ TD AL +AAQLS +YI+DRFLPDKA+DLIDEAG+R
Sbjct: 363 PSVDMTIEILKGLRDRYEAHHRVSITDGALAAAAQLSDRYINDRFLPDKAVDLIDEAGAR 422
Query: 264 VRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGK 323
+R++ PE R+++ ++ ++ +EK A+ QDFEKA LRD E L G+
Sbjct: 423 MRIKRMTAPESIRKVDDQIAEVRREKEAAIDAQDFEKAAGLRDTERKL----------GE 472
Query: 324 EMSKAETE--AGDVGPV--VTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVI 379
E ++ E + +GD+ + V E I ++ WTGIPV K++ +ES RLL MEE LHKR+I
Sbjct: 473 ERAEKEKQWRSGDLEDIAEVGEEQIAEVLGNWTGIPVFKLTEEESSRLLHMEEELHKRII 532
Query: 380 GQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIR 439
GQD+AVK++SRAIRR R GLK+P RP SFIF+GP+GVGK+EL+K+LA + FG ++A+I+
Sbjct: 533 GQDDAVKSVSRAIRRTRAGLKDPRRPSGSFIFAGPSGVGKTELSKSLANFLFGDDDALIQ 592
Query: 440 LDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMML 499
+DM EF +R T S+L G+PPGYVGY EGGQLTE VRR+P++VVLFDEIEKAH +++N +L
Sbjct: 593 IDMGEFHDRFTASRLFGAPPGYVGYDEGGQLTEKVRRKPFSVVLFDEIEKAHKEIYNTLL 652
Query: 500 QILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGF-DLDYDEKDSSYNRIKS 558
Q+LE+GRLTD +GR VDFKNT+LI TSN+G+ I K +GF + + D Y+R+K
Sbjct: 653 QVLEEGRLTDGQGRVVDFKNTVLIFTSNLGTQDISK-AVGMGFSSVGEHDADGQYDRMKQ 711
Query: 559 LVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERF 618
V +ELK++FRPEFLNR+DE++VF QLT+ ++ E+ D+++ V L KD+ +++TE+
Sbjct: 712 KVNDELKKHFRPEFLNRIDEIVVFHQLTQEQIVEMVDLLIGRVSKALAQKDMGIELTEKA 771
Query: 619 RERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDS-DGNVTVLN 677
+ + + G++P GARPLRR I R +ED ++EK+L E+ G+ V VDV+ DG +
Sbjct: 772 KNLLAKRGFDPVLGARPLRRTIQREIEDVLSEKILFGEVGAGEIVTVDVEGWDGESKETD 831
Query: 678 GSSGAPESLADPLP 691
+S PLP
Sbjct: 832 KASFTFTPRVKPLP 845
>gi|282850309|ref|ZP_06259688.1| negative regulator of genetic competence ClpC/MecB [Veillonella
parvula ATCC 17745]
gi|282579802|gb|EFB85206.1| negative regulator of genetic competence ClpC/MecB [Veillonella
parvula ATCC 17745]
Length = 815
Score = 770 bits (1989), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/683 (55%), Positives = 518/683 (75%), Gaps = 15/683 (2%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
++G + + G G +S N + L ++ T+L + A++GK+DPV+GR +I+RV+QIL R
Sbjct: 140 ILGSNKGSNNGGQEGINSNNDLGELSDFATDLNESAKQGKIDPVIGRDTEIQRVIQILSR 199
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNP LIGEPGVGKTAIAEGLAQRI + +VP+ + K++I+L +G L+AG KYRGEFE
Sbjct: 200 RTKNNPVLIGEPGVGKTAIAEGLAQRIVTDNVPEILRNKRIISLSIGSLLAGAKYRGEFE 259
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
ERLKK ++E++Q D++I+FIDE+HTL+GAGA EG +DAANILKP+LARGE Q IGATTLD
Sbjct: 260 ERLKKAIDEVQQHDDMIIFIDEIHTLVGAGATEGTMDAANILKPALARGEFQVIGATTLD 319
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EY+K+IEKD ALERRFQPV+V EP+ ++ ++ILKGLR+RYE HK + TDEAL +A LS
Sbjct: 320 EYKKYIEKDAALERRFQPVQVGEPNEEDALEILKGLRDRYEAFHKAKITDEALTAAVSLS 379
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
+YI+DRFLPDKAID++DEA S+VR++ + + LE L + KEK AV QDFEK
Sbjct: 380 SRYITDRFLPDKAIDVVDEAASKVRMKVFSAAPDVKALEDRLNTVKKEKEAAVTSQDFEK 439
Query: 301 AGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVS 360
A +LRD E L +I DK K ++K E D +VTE DI +V+ WTGIPV K++
Sbjct: 440 AAKLRDEEQSLLKEIG---DK-KSIAK---EKSDQKLIVTEEDIAAVVAQWTGIPVVKIA 492
Query: 361 TDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 420
+ES LL +EE LHKRV+GQDEAV A+++A+RRAR GLK+P RPI SF+F GPTGVGK+
Sbjct: 493 EEESATLLHLEEELHKRVVGQDEAVTAVAKAVRRARAGLKDPKRPIGSFLFLGPTGVGKT 552
Query: 421 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 480
ELA+ALA+ FG E AMIRLDMSE+ME+HTVS+L+G+PPGYVGY EGGQLT+AVRR+PY+
Sbjct: 553 ELARALASSLFGDESAMIRLDMSEYMEKHTVSRLVGAPPGYVGYEEGGQLTDAVRRKPYS 612
Query: 481 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI 540
V+L DE+EKAH D FN++LQ+L+DGRLTDS+GRTVDF+NT++IMTSN+G+ + K +
Sbjct: 613 VILLDEVEKAHADFFNILLQVLDDGRLTDSQGRTVDFRNTVIIMTSNLGAKALHKNLPEL 672
Query: 541 GF------DLDYDE-KDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEI 593
GF D + DE K + K V + +K++FRPEFLNR+DEMIVF LT+ ++K+I
Sbjct: 673 GFLAAKKSDSNVDENKGIDFKEAKKSVMDAVKRHFRPEFLNRIDEMIVFHPLTEEDLKKI 732
Query: 594 ADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKML 653
I++ +V RL+ +D++L+++ + +V+EG + + GARPL+RAI RL+ED +++ +L
Sbjct: 733 VTILMSDVTKRLEERDLQLEISPEAMQLLVKEGSDFTMGARPLKRAIQRLIEDPVSDLIL 792
Query: 654 AREIKEGDSVIVDV-DSDGNVTV 675
+ KEG + D D+D V++
Sbjct: 793 KGDAKEGKIIKADAKDNDLVVSI 815
>gi|376255026|ref|YP_005143485.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
diphtheriae PW8]
gi|372118110|gb|AEX70580.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
diphtheriae PW8]
Length = 878
Score = 770 bits (1989), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 383/674 (56%), Positives = 515/674 (76%), Gaps = 17/674 (2%)
Query: 24 TLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGL 83
L+++G NLT+ A+EGKLDPVVGR+ +IER++Q+L RRTKNNP LIGEPGVGKTA+ EGL
Sbjct: 183 VLDQFGRNLTQAAKEGKLDPVVGREQEIERIMQVLSRRTKNNPVLIGEPGVGKTAVVEGL 242
Query: 84 AQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEV 143
A I +G VP+T++ K+V +LD+G LVAG++YRG+FEERLKK+++EI Q +IILFIDE+
Sbjct: 243 ALDIVNGKVPETLKDKQVYSLDLGSLVAGSRYRGDFEERLKKVLKEINQRGDIILFIDEI 302
Query: 144 HTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPE 203
HTL+GAGAAEGAIDAA++LKP LARGELQ IGATTLDEYRKHIEKD ALERRFQPV+VPE
Sbjct: 303 HTLVGAGAAEGAIDAASLLKPKLARGELQTIGATTLDEYRKHIEKDAALERRFQPVQVPE 362
Query: 204 PSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSR 263
PSVD TI+ILKGLR+RYE HH++ TD AL +AAQLS +YI+DRFLPDKA+DLIDEAG+R
Sbjct: 363 PSVDMTIEILKGLRDRYEAHHRVSITDGALAAAAQLSDRYINDRFLPDKAVDLIDEAGAR 422
Query: 264 VRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGK 323
+R++ PE R+++ ++ ++ +EK A+ QDFEKA LRD E L G+
Sbjct: 423 MRIKRMTAPESIRKVDDQIAEVRREKEAAIDAQDFEKAAGLRDTERKL----------GE 472
Query: 324 EMSKAETE--AGDVGPV--VTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVI 379
E ++ E + +GD+ + V E I ++ WTGIPV K++ +ES RLL MEE LHKR+I
Sbjct: 473 ERAEKEKQWRSGDLEDIAEVGEEQIAEVLGNWTGIPVFKLTEEESSRLLHMEEELHKRII 532
Query: 380 GQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIR 439
GQD+AVK++SRAIRR R GLK+P RP SFIF+GP+GVGK+EL+K+LA + FG ++A+I+
Sbjct: 533 GQDDAVKSVSRAIRRTRAGLKDPRRPSGSFIFAGPSGVGKTELSKSLANFLFGDDDALIQ 592
Query: 440 LDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMML 499
+DM EF +R T S+L G+PPGYVGY EGGQLTE VRR+P++VVLFDEIEKAH +++N +L
Sbjct: 593 IDMGEFHDRFTASRLFGAPPGYVGYDEGGQLTEKVRRKPFSVVLFDEIEKAHKEIYNTLL 652
Query: 500 QILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGF-DLDYDEKDSSYNRIKS 558
Q+LE+GRLTD +GR VDFKNT+LI TSN+G+ I K +GF + + D Y+R+K
Sbjct: 653 QVLEEGRLTDGQGRVVDFKNTVLIFTSNLGTQDISK-AVGMGFSSVGEHDADGQYDRMKQ 711
Query: 559 LVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERF 618
V +ELK++FRPEFLNR+DE++VF QLT+ ++ E+ D+++ V L KD+ +++TE+
Sbjct: 712 KVNDELKKHFRPEFLNRIDEIVVFHQLTQEQIVEMVDLLIGRVSKALAQKDMGIELTEKA 771
Query: 619 RERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDS-DGNVTVLN 677
+ + + G++P GARPLRR I R +ED ++EK+L E+ G+ V VDV+ DG +
Sbjct: 772 KNLLAKRGFDPVLGARPLRRTIQREIEDVLSEKILFGEVGAGEIVTVDVEGWDGESKETD 831
Query: 678 GSSGAPESLADPLP 691
+S PLP
Sbjct: 832 KASFTFTPRVKPLP 845
>gi|296138309|ref|YP_003645552.1| ATPase AAA [Tsukamurella paurometabola DSM 20162]
gi|296026443|gb|ADG77213.1| ATPase AAA-2 domain protein [Tsukamurella paurometabola DSM 20162]
Length = 855
Score = 770 bits (1988), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/674 (56%), Positives = 515/674 (76%), Gaps = 21/674 (3%)
Query: 4 ESTEAVGAGV---GGGSSGNKMPTL--EEYGTNLTKLAEEGKLDPVVGRQPQIERVVQIL 58
E E GAG GG +G +L +++G NLT A +GKLDPV+GR +IER++Q+L
Sbjct: 149 EGGEPAGAGARASSGGEAGTPSTSLVLDQFGRNLTAAAAQGKLDPVIGRSKEIERIMQVL 208
Query: 59 GRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGE 118
RRTKNNP LIGEPGVGKTA+ EGLAQ I +G+VP+T++ K++ TLD+G LVAG++YRG+
Sbjct: 209 SRRTKNNPVLIGEPGVGKTAVVEGLAQAIVNGNVPETLKDKQLYTLDLGSLVAGSRYRGD 268
Query: 119 FEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATT 178
FEERL+K+++EI +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATT
Sbjct: 269 FEERLRKVLKEIDTRGDIILFIDELHTLVGAGAAEGAIDAASILKPKLARGELQTIGATT 328
Query: 179 LDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQ 238
LDEYRK+IEKD ALERRFQPV+V EPSV+ I+ILKGLR+RYE HH++ TD ALV+AA
Sbjct: 329 LDEYRKYIEKDAALERRFQPVQVGEPSVEHAIEILKGLRDRYEAHHRISITDSALVAAAT 388
Query: 239 LSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDF 298
L+ +YI+DRFLPDKAIDLIDEAG+R+R+R P + R+ + ++ +EK A+ QDF
Sbjct: 389 LADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPDLRQFDDKIADARREKESAIDEQDF 448
Query: 299 EKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIP 355
EKA LRD+E L + + + + AGD+ VV EVD I ++ WTGIP
Sbjct: 449 EKAASLRDKEKQLIGE--------RAEREKQWRAGDL-DVVAEVDEEQIAEVLGNWTGIP 499
Query: 356 VEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPT 415
V K++ +E+ RLL+ME+ LHKR+IGQ++AVKA+S+AIRR R GLK+P RP SFIF+GP+
Sbjct: 500 VFKLTEEETTRLLRMEDELHKRIIGQEDAVKAVSKAIRRTRAGLKDPKRPSGSFIFAGPS 559
Query: 416 GVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVR 475
GVGK+EL+KALA + FG ++A+I++DM EF +R T S+L G+PPGYVGY EGGQLTE VR
Sbjct: 560 GVGKTELSKALANFLFGEDDALIQIDMGEFHDRFTASRLFGAPPGYVGYEEGGQLTEKVR 619
Query: 476 RRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEK 535
R+P++VVLFDEIEKAH +++N +LQ+LEDGRLTD +GRTVDFKNT+LI TSN+G+ I K
Sbjct: 620 RKPFSVVLFDEIEKAHSEIYNTLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGTGDISK 679
Query: 536 GGRRIGFDLDYDEKD-SSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIA 594
+G + D ++Y+R+K V +ELK++FRPEFLNR+D+++VF QLT+ ++ E+
Sbjct: 680 A---VGLGFTQGDSDGANYDRMKQKVNDELKKHFRPEFLNRIDDIVVFHQLTQPQIIEMV 736
Query: 595 DIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLA 654
D+ML V LK KD+E++VT++ + + + G++P GARPLRR I R +ED+++EK+L
Sbjct: 737 DLMLSRVAVALKNKDMEIEVTDQAKSLLAKRGFDPVLGARPLRRTIQREIEDNLSEKILF 796
Query: 655 REIKEGDSVIVDVD 668
E+ G V+VDV+
Sbjct: 797 GELGPGQIVVVDVE 810
>gi|38234547|ref|NP_940314.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
diphtheriae NCTC 13129]
gi|38200810|emb|CAE50514.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
diphtheriae]
Length = 883
Score = 770 bits (1988), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 383/674 (56%), Positives = 515/674 (76%), Gaps = 17/674 (2%)
Query: 24 TLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGL 83
L+++G NLT+ A+EGKLDPVVGR+ +IER++Q+L RRTKNNP LIGEPGVGKTA+ EGL
Sbjct: 188 VLDQFGRNLTQAAKEGKLDPVVGREQEIERIMQVLSRRTKNNPVLIGEPGVGKTAVVEGL 247
Query: 84 AQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEV 143
A I +G VP+T++ K+V +LD+G LVAG++YRG+FEERLKK+++EI Q +IILFIDE+
Sbjct: 248 ALDIVNGKVPETLKDKQVYSLDLGSLVAGSRYRGDFEERLKKVLKEINQRGDIILFIDEI 307
Query: 144 HTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPE 203
HTL+GAGAAEGAIDAA++LKP LARGELQ IGATTLDEYRKHIEKD ALERRFQPV+VPE
Sbjct: 308 HTLVGAGAAEGAIDAASLLKPKLARGELQTIGATTLDEYRKHIEKDAALERRFQPVQVPE 367
Query: 204 PSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSR 263
PSVD TI+ILKGLR+RYE HH++ TD AL +AAQLS +YI+DRFLPDKA+DLIDEAG+R
Sbjct: 368 PSVDMTIEILKGLRDRYEAHHRVSITDGALAAAAQLSDRYINDRFLPDKAVDLIDEAGAR 427
Query: 264 VRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGK 323
+R++ PE R+++ ++ ++ +EK A+ QDFEKA LRD E L G+
Sbjct: 428 MRIKRMTAPESIRKVDDQIAEVRREKEAAIDAQDFEKAAGLRDTERKL----------GE 477
Query: 324 EMSKAETE--AGDVGPV--VTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVI 379
E ++ E + +GD+ + V E I ++ WTGIPV K++ +ES RLL MEE LHKR+I
Sbjct: 478 ERAEKEKQWRSGDLEDIAEVGEEQIAEVLGNWTGIPVFKLTEEESSRLLHMEEELHKRII 537
Query: 380 GQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIR 439
GQD+AVK++SRAIRR R GLK+P RP SFIF+GP+GVGK+EL+K+LA + FG ++A+I+
Sbjct: 538 GQDDAVKSVSRAIRRTRAGLKDPRRPSGSFIFAGPSGVGKTELSKSLANFLFGDDDALIQ 597
Query: 440 LDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMML 499
+DM EF +R T S+L G+PPGYVGY EGGQLTE VRR+P++VVLFDEIEKAH +++N +L
Sbjct: 598 IDMGEFHDRFTASRLFGAPPGYVGYDEGGQLTEKVRRKPFSVVLFDEIEKAHKEIYNTLL 657
Query: 500 QILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGF-DLDYDEKDSSYNRIKS 558
Q+LE+GRLTD +GR VDFKNT+LI TSN+G+ I K +GF + + D Y+R+K
Sbjct: 658 QVLEEGRLTDGQGRVVDFKNTVLIFTSNLGTQDISK-AVGMGFSSVGEHDADGQYDRMKQ 716
Query: 559 LVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERF 618
V +ELK++FRPEFLNR+DE++VF QLT+ ++ E+ D+++ V L KD+ +++TE+
Sbjct: 717 KVNDELKKHFRPEFLNRIDEIVVFHQLTQEQIVEMVDLLIGRVSKALAQKDMGIELTEKA 776
Query: 619 RERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDS-DGNVTVLN 677
+ + + G++P GARPLRR I R +ED ++EK+L E+ G+ V VDV+ DG +
Sbjct: 777 KNLLAKRGFDPVLGARPLRRTIQREIEDVLSEKILFGEVGAGEIVTVDVEGWDGESKETD 836
Query: 678 GSSGAPESLADPLP 691
+S PLP
Sbjct: 837 KASFTFTPRVKPLP 850
>gi|219848346|ref|YP_002462779.1| ATPase AAA-2 domain-containing protein [Chloroflexus aggregans DSM
9485]
gi|219542605|gb|ACL24343.1| ATPase AAA-2 domain protein [Chloroflexus aggregans DSM 9485]
Length = 834
Score = 770 bits (1988), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/657 (58%), Positives = 495/657 (75%), Gaps = 20/657 (3%)
Query: 20 NKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAI 79
+K P L+ GT+LT++AE+G+LDP++GRQ +IERV+QIL RRTKNNP LIGEPGVGKTAI
Sbjct: 170 SKTPYLDALGTDLTEMAEQGRLDPIIGRQHEIERVIQILSRRTKNNPALIGEPGVGKTAI 229
Query: 80 AEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILF 139
EGLAQRI GDVPD+I+GK+V+TLDMG LVAGTKYRG+FEERLK++++EIK+S ILF
Sbjct: 230 VEGLAQRIVQGDVPDSIKGKRVVTLDMGALVAGTKYRGQFEERLKRVIDEIKES-RCILF 288
Query: 140 IDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPV 199
IDE HT+IGAG AEG +DAANILKP+L+RGELQ IGATTLDEYRK+IE+D ALERRFQPV
Sbjct: 289 IDEFHTIIGAGGAEGTLDAANILKPALSRGELQTIGATTLDEYRKYIERDAALERRFQPV 348
Query: 200 KVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDE 259
V EPS+++TIQIL+G++ RYE H+L+ +DEA+ +AA LS +Y+ DR LPDKAIDLIDE
Sbjct: 349 MVDEPSIEDTIQILRGIKSRYEDFHQLQISDEAIRAAAVLSARYVPDRQLPDKAIDLIDE 408
Query: 260 AGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALV 319
A SRVR+ + P R+ + L + KE+ A+ +E A LR+RE + ++I +
Sbjct: 409 AASRVRMYRSATPPRLRDALRGLEALRKEREAALEDHQYELAENLREREERMLSRIQEI- 467
Query: 320 DKGKEMSKAETEAGDVG------PVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEET 373
E E G G P VTE DI +V WTG+PV +++ +E+ RL+ MEE
Sbjct: 468 ---------EAELGTRGNERYDRPYVTEEDIAEVVGMWTGVPVTRLTGNETQRLMHMEEF 518
Query: 374 LHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGS 433
LH R++GQ EA+ IS+A+RRAR GLK+P RPI SFIF GPTGVGK+ELAKALA + FG+
Sbjct: 519 LHSRIVGQHEAIVTISKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELAKALAEFMFGT 578
Query: 434 EEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPD 493
EEA+I++DMSEF ERHT S+L+GSPPGY+GY EGGQLT+AVRR+PY+VVLFDEIEKAHPD
Sbjct: 579 EEALIKIDMSEFQERHTTSRLVGSPPGYIGYGEGGQLTDAVRRKPYSVVLFDEIEKAHPD 638
Query: 494 VFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSY 553
FN++LQ+LEDG LTD KGR VDF+NT++IMTSNVG+ I + RIGF + E D +
Sbjct: 639 AFNLLLQVLEDGHLTDGKGRRVDFRNTIIIMTSNVGTEHIRRAS-RIGFGGNAAEIDQAD 697
Query: 554 NRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQ 613
R K V E L+ FRPEFLNR+D I+F LT E++ I +MLK V +L I+L
Sbjct: 698 MRRK--VDEALRMLFRPEFLNRIDATIIFHPLTTEEIQSITQLMLKRVQTQLDEHQIKLV 755
Query: 614 VTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSD 670
V E + GY+P++GARPLRR I L+ED +AE +L+ + ++GD+VIVDV D
Sbjct: 756 VQPDALEYLARRGYDPAFGARPLRRVITNLIEDPLAEGLLSGQFQDGDTVIVDVYED 812
>gi|404424419|ref|ZP_11006001.1| negative regulator of genetic competence ClpC/mecB [Mycobacterium
fortuitum subsp. fortuitum DSM 46621]
gi|403651405|gb|EJZ06539.1| negative regulator of genetic competence ClpC/mecB [Mycobacterium
fortuitum subsp. fortuitum DSM 46621]
Length = 842
Score = 770 bits (1988), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/679 (56%), Positives = 514/679 (75%), Gaps = 27/679 (3%)
Query: 24 TLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGL 83
L+++G NLT A EGKLDPV+GR+ +IERV+Q+L RRTKNNP LIGEPGVGKTA+ EGL
Sbjct: 170 VLDQFGRNLTAAAMEGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGL 229
Query: 84 AQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEV 143
AQ I G+VP+T++ K++ TLD+G LVAG++YRG+FEERLKK+++EI +IILFIDE+
Sbjct: 230 AQAIVHGEVPETLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDEL 289
Query: 144 HTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPE 203
HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEYRK+IEKD ALERRFQPV+V E
Sbjct: 290 HTLVGAGAAEGAIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGE 349
Query: 204 PSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSR 263
P+V+ TI+ILKGLR+RYE HH++ TD ALV+AA L+ +YI+DRFLPDKAIDLIDEAG+R
Sbjct: 350 PTVEHTIEILKGLRDRYEAHHRVSITDGALVAAATLADRYINDRFLPDKAIDLIDEAGAR 409
Query: 264 VRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGK 323
+R+R P + RE ++++ +EK A+ QDFEKA LRDRE L AQ +G+
Sbjct: 410 MRIRRMTAPPDLREFDEKIADARREKESAIDAQDFEKAASLRDREKQLVAQ------RGE 463
Query: 324 EMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIG 380
+ + +GD+ VV EVD I ++ WTGIPV K++ E+ RLL+MEE LHKR+IG
Sbjct: 464 R--EKQWRSGDL-DVVAEVDDEQIAEVLGNWTGIPVFKLTEAETTRLLRMEEELHKRIIG 520
Query: 381 QDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRL 440
Q++AVKA+S+AIRR R GLK+P RP SFIF+GP+GVGK+EL+KALA + FG ++A+I++
Sbjct: 521 QEDAVKAVSKAIRRTRAGLKDPKRPSGSFIFAGPSGVGKTELSKALANFLFGDDDALIQI 580
Query: 441 DMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQ 500
DM EF +R T S+L G+PPGYVGY EGGQLTE VRR+P++VVLFDEIEKAH +++N +LQ
Sbjct: 581 DMGEFHDRFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNSLLQ 640
Query: 501 ILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLV 560
+LEDGRLTD +GRTVDFKNT+LI TSN+G+S I K +G +++Y R+K V
Sbjct: 641 VLEDGRLTDGQGRTVDFKNTVLIFTSNLGTSDISKA---VGLGFSQGGGENNYERMKQKV 697
Query: 561 TEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRE 620
+ELK++FRPEFLNR+D++IVF QLT+ E+ ++ D+M+ V ++L KD+ +++T + +
Sbjct: 698 NDELKKHFRPEFLNRIDDIIVFHQLTQDEIIQMVDLMIGRVGNQLAGKDMAMELTPKAKA 757
Query: 621 RVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDS--------DGN 672
+ + G++P GARPLRR I R +ED ++EK+L E+ G V VDV+ D
Sbjct: 758 LLAKRGFDPVLGARPLRRTIQREIEDQLSEKILFEELGPGQLVTVDVEGWDGEGAGEDAK 817
Query: 673 VTVLNGSSGAPESLADPLP 691
T SGAP++ P
Sbjct: 818 FTF----SGAPKAAGSDGP 832
>gi|373253679|ref|ZP_09541797.1| ATP-dependent Clp protease ATP-binding subunit [Nesterenkonia sp.
F]
Length = 868
Score = 770 bits (1988), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/676 (57%), Positives = 505/676 (74%), Gaps = 19/676 (2%)
Query: 3 GESTEAVGAGVGGGSSGNKMPT----LEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQIL 58
G + GAGVG S+G P L+++G NLT A E +LDPVVGR + ERV+Q+L
Sbjct: 148 GGGQDKAGAGVGQ-STGEGTPAGSVVLDQFGRNLTAAAREAQLDPVVGRDYERERVMQVL 206
Query: 59 GRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGE 118
RRTKNNP LIGEPGVGKTA+ EGLAQ I +GDVP+ + K++ TLD+G LVAG++YRG+
Sbjct: 207 SRRTKNNPVLIGEPGVGKTAVVEGLAQAIVAGDVPEILRDKQLYTLDLGSLVAGSRYRGD 266
Query: 119 FEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATT 178
FEERLKK+++EIK +IILFIDE+HTL+GAGAAEGAIDAANILKP LARGELQ IGATT
Sbjct: 267 FEERLKKVLKEIKTRGDIILFIDEIHTLVGAGAAEGAIDAANILKPMLARGELQTIGATT 326
Query: 179 LDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQ 238
+DEYRKHIEKD ALERRFQP++V EPSV+ T QIL+GLR+RYE HHK+ T+EAL +A+
Sbjct: 327 MDEYRKHIEKDAALERRFQPIQVEEPSVEITTQILRGLRDRYEAHHKVSITEEALEAASS 386
Query: 239 LSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDF 298
L+ +YI+DRFLPDKAIDLIDEAG+R+R++ P E +E + ++ + +EK A+ QDF
Sbjct: 387 LANRYINDRFLPDKAIDLIDEAGARLRIQRMTAPPELKEYDAQIEDVRREKEAAIDAQDF 446
Query: 299 EKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIP 355
E A LRD+E L + ++ K S E + EVD + +++ TGIP
Sbjct: 447 EGAASLRDKEQRLVEERERKEEEWKSGSMDE---------IAEVDADLVAEVLAFSTGIP 497
Query: 356 VEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPT 415
V K++ ESDRL +MEE LHKRVIGQ+EA+K++SRAIRR R GLK+PNRP SFIF+GPT
Sbjct: 498 VFKLTEQESDRLKRMEEELHKRVIGQEEAIKSLSRAIRRTRAGLKDPNRPSGSFIFAGPT 557
Query: 416 GVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVR 475
GVGK+ELAK LA + FG E+A+I LDMSE+ E+HTVS+L G+PPGYVGY EGGQLTE VR
Sbjct: 558 GVGKTELAKTLAEFLFGDEDALITLDMSEYSEKHTVSRLFGAPPGYVGYEEGGQLTEKVR 617
Query: 476 RRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEK 535
RRP++VVLFDE+EKAH D+FN +LQILEDGRL+DS+GR VDFKNT++IMT+N+G+ I K
Sbjct: 618 RRPFSVVLFDEVEKAHADLFNSLLQILEDGRLSDSQGRQVDFKNTVIIMTTNLGTGEISK 677
Query: 536 GGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIAD 595
GF D ++Y R+K V++EL+Q+FRPEFLNR+D+ IVF QL + E+ +I D
Sbjct: 678 -SVMTGFQSSSD-TTTNYERMKGKVSQELRQHFRPEFLNRVDDTIVFPQLEQSEIVKIVD 735
Query: 596 IMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAR 655
+ + ++ DRL + + L VT+ R + E GY+PS GARPLRR I L+ED ++E++L
Sbjct: 736 LFVNQLRDRLSEQAMSLDVTQDARTFLAERGYDPSMGARPLRRTIQSLIEDQLSERILFG 795
Query: 656 EIKEGDSVIVDVDSDG 671
EI G ++ + V G
Sbjct: 796 EIPHGAAITIGVTGSG 811
>gi|407277667|ref|ZP_11106137.1| DNA binding ATP-dependent peptidase [Rhodococcus sp. P14]
Length = 841
Score = 770 bits (1988), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/670 (56%), Positives = 515/670 (76%), Gaps = 16/670 (2%)
Query: 3 GESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRT 62
G+ + G G + + L+++G NLT+ A EGKLDPV+GR +IERV+Q+L RRT
Sbjct: 147 GKEPQESGTSRGEAGTPSTSLVLDQFGRNLTQAALEGKLDPVIGRAKEIERVMQVLSRRT 206
Query: 63 KNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEER 122
KNNP LIGEPGVGKTA+ EGLAQ I +G+VP+T++ K++ TLD+G LVAG++YRG+FEER
Sbjct: 207 KNNPVLIGEPGVGKTAVVEGLAQAIVNGEVPETLKDKQLYTLDLGSLVAGSRYRGDFEER 266
Query: 123 LKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEY 182
LKK+++EI +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEY
Sbjct: 267 LKKVLKEINSRGDIILFIDELHTLVGAGAAEGAIDAASILKPKLARGELQTIGATTLDEY 326
Query: 183 RKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQ 242
RK+IEKD ALERRFQPV+V EP+V+ TI+ILKGLR+RYE HH++ TD+ALV+AA L+ +
Sbjct: 327 RKYIEKDAALERRFQPVQVGEPTVEHTIEILKGLRDRYEAHHRVSITDKALVAAASLADR 386
Query: 243 YISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAG 302
YI+DRFLPDKAIDLIDEAG+R+R+R P + RE + ++ +EK A+ QDFEKA
Sbjct: 387 YINDRFLPDKAIDLIDEAGARMRIRRMTAPPDLREFDDKIADARREKESAIDAQDFEKAA 446
Query: 303 ELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKV 359
LRD+E L AQ + + + AGD+ V+ EVD I +++ WTGIPV K+
Sbjct: 447 NLRDKEKQLVAQ--------RAEREKQWRAGDL-DVIAEVDEEQIAEVLANWTGIPVFKL 497
Query: 360 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 419
+ +E+ RLL+ME+ LHKR+IGQ++AVKA+++AIRR R GLK+P RP SFIF+GP+GVGK
Sbjct: 498 TEEETTRLLRMEDELHKRIIGQEDAVKAVAKAIRRTRAGLKDPKRPAGSFIFAGPSGVGK 557
Query: 420 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 479
+EL+KALA + FG ++A+I++DM EF +R T S+L G+PPGYVGY EGGQLTE VRR+P+
Sbjct: 558 TELSKALANFLFGEDDALIQIDMGEFHDRFTASRLFGAPPGYVGYEEGGQLTEKVRRKPF 617
Query: 480 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 539
+VVLFDEIEKAH +++N +LQ+LEDGRLTD +GRTVDFKNT+LI TSN+G++ I K
Sbjct: 618 SVVLFDEIEKAHQEIYNTLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGTADISKA--- 674
Query: 540 IGFDLDYDE-KDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIML 598
+G +S+Y R+K V +ELK++FRPEFLNR+D++IVF QLT+ ++ E+ D+M+
Sbjct: 675 VGLGFTKGTGAESNYERMKLKVNDELKKHFRPEFLNRIDDIIVFHQLTQEQIIEMVDLMI 734
Query: 599 KEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIK 658
V +LK KD+ +++TE+ + + + G++P GARPLRR I R +ED ++EK+L EI
Sbjct: 735 GRVEVQLKNKDMGIELTEKAKSLLAKRGFDPVLGARPLRRTIQREIEDQLSEKILFNEIG 794
Query: 659 EGDSVIVDVD 668
G V+VDV+
Sbjct: 795 PGQIVLVDVE 804
>gi|283455701|ref|YP_003360265.1| Negative regulator of genetic competence clpC/mecB [Bifidobacterium
dentium Bd1]
gi|283102335|gb|ADB09441.1| clpC Negative regulator of genetic competence clpC/mecB
[Bifidobacterium dentium Bd1]
Length = 863
Score = 770 bits (1988), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/666 (57%), Positives = 521/666 (78%), Gaps = 11/666 (1%)
Query: 25 LEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLA 84
L+++G NLT A GKLDPV+GR +IERV+ +L RRTKNNP LIGEPGVGKTA+ EGLA
Sbjct: 175 LDQFGRNLTAEAASGKLDPVIGRSSEIERVMVVLSRRTKNNPVLIGEPGVGKTAVVEGLA 234
Query: 85 QRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVH 144
Q+I +GDVP+T++GK+V +LD+G +VAG++YRG+FEERLKK+++EIK +I+LFIDE+H
Sbjct: 235 QKINAGDVPETLKGKQVYSLDLGSMVAGSRYRGDFEERLKKVLKEIKTRGDIVLFIDEIH 294
Query: 145 TLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEP 204
T++GAG+A+GA+ A+++LKP LARGELQ IGATT DEYRK+IEKD ALERRFQP++V EP
Sbjct: 295 TIVGAGSADGALGASDMLKPMLARGELQTIGATTTDEYRKYIEKDAALERRFQPIQVHEP 354
Query: 205 SVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRV 264
++ ETI+ILKGLRERYE HH + TD AL SAA+LS +YI D LPDKAIDLIDEAG+R+
Sbjct: 355 TIAETIEILKGLRERYENHHHVTITDGALQSAAELSSRYIQDSHLPDKAIDLIDEAGARL 414
Query: 265 RLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKE 324
R+R P E +EL+ ++ ++ +EK++A++ QDFEKA ELRDR+ L+A+ K KE
Sbjct: 415 RIRRLTAPPELKELDAKVAKLAEEKDQAIKDQDFEKAAELRDRQEKLEAE-----RKEKE 469
Query: 325 MSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEA 384
S E E+ DV VV E I ++S TGIPV K++ ES +L+ ME LHKR+IGQDEA
Sbjct: 470 SSWREGES-DVKMVVDEDVIAEVISQTTGIPVFKLTQAESKKLMSMESELHKRIIGQDEA 528
Query: 385 VKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSE 444
V A+SR+IRRARVGLK+P RP SFIF+GPTGVGK+ELAK LA + F E+A+IR+DMSE
Sbjct: 529 VSALSRSIRRARVGLKDPKRPSGSFIFAGPTGVGKTELAKTLAEFLFDDEDALIRVDMSE 588
Query: 445 FMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILED 504
F E++ S+L G+PPGYVGY EGG+LTE VRR+P++VVLFDEIEKAHPD+FN +LQ+L+D
Sbjct: 589 FSEKYAASRLFGAPPGYVGYEEGGELTEKVRRKPFSVVLFDEIEKAHPDIFNTLLQVLDD 648
Query: 505 GRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEEL 564
G LTD +GR VDFKNT++I+T+N+G+ I K GF+L + +SSY R+K V+ EL
Sbjct: 649 GHLTDGQGRKVDFKNTIIILTTNLGTRDIAKAA-NTGFNLGTN-TESSYQRMKDQVSSEL 706
Query: 565 KQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVE 624
KQ FRPEFLNRLD++IVF+QLT+ +V++I D+ +K++ DRL + + L++T+ ++ + +
Sbjct: 707 KQQFRPEFLNRLDDIIVFKQLTEPQVRQIVDLDVKQLNDRLFDRHMSLELTDAAKDLLAQ 766
Query: 625 EGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNGSSGAPE 684
+G++P GARPLRR I R +ED+++EK+L ++++G V VD + +G +L + + E
Sbjct: 767 KGFDPLLGARPLRRVIQRDIEDAISEKILMGDLEDGQRVKVDAEGEG---ILGEFTFSGE 823
Query: 685 SLADPL 690
+ +P+
Sbjct: 824 AFEEPV 829
>gi|363419559|ref|ZP_09307659.1| DNA binding ATP-dependent peptidase [Rhodococcus pyridinivorans
AK37]
gi|359737034|gb|EHK85969.1| DNA binding ATP-dependent peptidase [Rhodococcus pyridinivorans
AK37]
Length = 847
Score = 770 bits (1987), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/670 (57%), Positives = 518/670 (77%), Gaps = 16/670 (2%)
Query: 4 ESTEAVGAGVGGGSSGNKMPTL--EEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRR 61
+ E +G G +G +L +++G NLT+ A EGKLDPV+GR +IERV+Q+L RR
Sbjct: 146 QGKEPAESGTSRGETGTPSTSLVLDQFGRNLTQAALEGKLDPVIGRAKEIERVMQVLSRR 205
Query: 62 TKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEE 121
TKNNP LIGEPGVGKTA+ EGLAQ I +G+VP+T++ K++ TLD+G LVAG++YRG+FEE
Sbjct: 206 TKNNPVLIGEPGVGKTAVVEGLAQAIVNGEVPETLKDKQLYTLDLGSLVAGSRYRGDFEE 265
Query: 122 RLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDE 181
RLKK+++EI +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDE
Sbjct: 266 RLKKVLKEINSRGDIILFIDELHTLVGAGAAEGAIDAASILKPKLARGELQTIGATTLDE 325
Query: 182 YRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSY 241
YRK+IEKD ALERRFQPV+V EP+V+ TI+ILKGLR+RYE HH++ TD+ALV++A L+
Sbjct: 326 YRKYIEKDAALERRFQPVQVGEPTVEHTIEILKGLRDRYEAHHRVSITDKALVASATLAD 385
Query: 242 QYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKA 301
+YI+DRFLPDKAIDLIDEAG+R+R+R P + RE + ++ +EK A+ QDFEKA
Sbjct: 386 RYINDRFLPDKAIDLIDEAGARMRIRRMTAPPDLREFDDKIADARREKESAIDAQDFEKA 445
Query: 302 GELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEK 358
LRD+E L AQ + + + AGD+ V+ EVD I +++ WTGIPV K
Sbjct: 446 ASLRDKEKQLVAQ--------RAEREKQWRAGDL-DVIAEVDEEQIAEVLANWTGIPVFK 496
Query: 359 VSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVG 418
++ +E+ RLL+ME+ LHKR+IGQ++AVKA+++AIRR R GLK+P RP SFIF+GP+GVG
Sbjct: 497 LTEEETTRLLRMEDELHKRIIGQEDAVKAVAKAIRRTRAGLKDPKRPSGSFIFAGPSGVG 556
Query: 419 KSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRP 478
K+EL+KALA + FG ++A+I++DM EF +R T S+L G+PPGYVGY EGGQLTE VRR+P
Sbjct: 557 KTELSKALANFLFGEDDALIQIDMGEFHDRFTASRLFGAPPGYVGYEEGGQLTEKVRRKP 616
Query: 479 YTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR 538
++VVLFDEIEKAH +++N +LQ+LEDGRLTD +GRTVDFKNT+LI TSN+G++ I K
Sbjct: 617 FSVVLFDEIEKAHQEIYNTLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGTADISK-AV 675
Query: 539 RIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIML 598
+GF E S+Y R+K+ V +ELK++FRPEFLNR+D++IVF QLT+ ++ ++ D+M+
Sbjct: 676 GLGFSAGTGEA-SNYERMKNKVHDELKKHFRPEFLNRIDDIIVFHQLTQDQIIQMVDLMV 734
Query: 599 KEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIK 658
V +LK KD+ +++TE+ + + + G++P GARPLRR I R +ED ++EK+L EI
Sbjct: 735 GRVETQLKNKDMGIELTEKAKSLLAKRGFDPVLGARPLRRTIQREIEDQLSEKILFGEIG 794
Query: 659 EGDSVIVDVD 668
G V+VDV+
Sbjct: 795 AGQIVLVDVE 804
>gi|239916715|ref|YP_002956273.1| ATPase with chaperone activity, ATP-binding subunit [Micrococcus
luteus NCTC 2665]
gi|281414827|ref|ZP_06246569.1| ATPase with chaperone activity, ATP-binding subunit [Micrococcus
luteus NCTC 2665]
gi|239837922|gb|ACS29719.1| ATPase with chaperone activity, ATP-binding subunit [Micrococcus
luteus NCTC 2665]
Length = 851
Score = 770 bits (1987), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/685 (57%), Positives = 516/685 (75%), Gaps = 14/685 (2%)
Query: 7 EAVGAGVG-GGSSGNKMPT--LEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTK 63
E GAGVG GG +G + L+++G NLT A +GKLDPV+GR ++ERV+Q+L RRTK
Sbjct: 154 ETAGAGVGQGGEAGQNAGSVVLDQFGRNLTAAAHDGKLDPVIGRAGEMERVMQVLSRRTK 213
Query: 64 NNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERL 123
NNP LIGEPGVGKTA+ EGLAQ I GDVP+T++ K++ +LD+G LVAG++YRG+FEERL
Sbjct: 214 NNPVLIGEPGVGKTAVVEGLAQAIERGDVPETLKDKQLYSLDLGSLVAGSRYRGDFEERL 273
Query: 124 KKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYR 183
KK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEYR
Sbjct: 274 KKVLKEIRTRGDIILFIDEIHTLVGAGAAEGAIDAASILKPMLARGELQTIGATTLDEYR 333
Query: 184 KHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQY 243
KHIEKD ALERRFQP++V EPSV++ +IL+GLR+RYE HHK+ TD AL +AA L+ +Y
Sbjct: 334 KHIEKDAALERRFQPIQVAEPSVEDATEILRGLRDRYEAHHKVSITDGALKAAAGLADRY 393
Query: 244 ISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGE 303
+SDR LPDKAIDLIDEAG+R+R+R +P E + E + ++ +K A+ GQDFE A
Sbjct: 394 VSDRHLPDKAIDLIDEAGARLRIRRMTVPPEIKAYESRIAEVRTQKEAAIDGQDFEGAAR 453
Query: 304 LRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD-IQHIVSAWTGIPVEKVSTD 362
LRD+E L+ D+ +E +A D + D I ++S TGIPV K++ +
Sbjct: 454 LRDQEQQLE-------DERREKEQAWRTGADADVATVDEDLIAEVLSKSTGIPVFKLTAE 506
Query: 363 ESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSEL 422
E+DRL ME+ LH+RVIGQDEA+K++SRAIRR R GLK+PNRP SFIF+GPTGVGK+EL
Sbjct: 507 ETDRLRTMEDELHRRVIGQDEAIKSLSRAIRRTRAGLKDPNRPSGSFIFAGPTGVGKTEL 566
Query: 423 AKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVV 482
AK+LA + FG E+A+I LDMSEF E+HTVS+L G+PPGYVGY EGGQLTE VRRRP++VV
Sbjct: 567 AKSLAEFLFGDEDALITLDMSEFQEKHTVSRLFGAPPGYVGYEEGGQLTEKVRRRPFSVV 626
Query: 483 LFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGF 542
LFDE+EKAH D+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N+G+ I K G GF
Sbjct: 627 LFDEVEKAHQDLFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNLGTRDISK-GVMTGF 685
Query: 543 DLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVF 602
D + Y R+K V EEL+Q+FRPEFLNR+D++IVF QL K E+ EI D+ + +
Sbjct: 686 QSATDTT-TGYERMKGKVKEELRQHFRPEFLNRVDDVIVFPQLQKHEIVEIVDLFVARLG 744
Query: 603 DRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDS 662
RL +D+ +++T+ ++ + + GY+P+ GARPLRR I +++ED ++EK+L EI G
Sbjct: 745 RRLAEQDLSIELTQSAKDLLADRGYDPAMGARPLRRTIQQMVEDQLSEKILFGEIPAGSL 804
Query: 663 VIVDVDSDGNVTVLNGS-SGAPESL 686
+ VD +G L + SG E+L
Sbjct: 805 ITVDATGEGEGAELTFTFSGGREAL 829
>gi|357400203|ref|YP_004912128.1| class III stress response-related ATPase, AAA+ superfamily
[Streptomyces cattleya NRRL 8057 = DSM 46488]
gi|337766612|emb|CCB75323.1| class III stress response-related ATPase, AAA+ superfamily
[Streptomyces cattleya NRRL 8057 = DSM 46488]
Length = 822
Score = 770 bits (1987), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/687 (57%), Positives = 526/687 (76%), Gaps = 16/687 (2%)
Query: 11 AGVGGGSSGNKMPTL--EEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCL 68
A GG + G +L +++G NLT+ A E KLDPV+GR+ +IERV+Q+L RRTKNNP L
Sbjct: 131 ATAGGPAEGTPSTSLVLDQFGRNLTQAARETKLDPVIGREKEIERVMQVLSRRTKNNPVL 190
Query: 69 IGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLME 128
IGEPGVGKTA+ EGLAQ I G+VP+T++ K++ TLD+G LVAG++YRG+FEERLKK+++
Sbjct: 191 IGEPGVGKTAVVEGLAQAIVKGEVPETLKDKQLYTLDLGALVAGSRYRGDFEERLKKVLK 250
Query: 129 EIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEK 188
EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEYRKH+EK
Sbjct: 251 EIRTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIGATTLDEYRKHLEK 310
Query: 189 DPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRF 248
D ALERRFQP++V EPS+ TI+ILKGLR+RYE HH++ TD ALV+AA L+ +YISDRF
Sbjct: 311 DAALERRFQPIQVAEPSLPHTIEILKGLRDRYEAHHRVSITDAALVAAATLADRYISDRF 370
Query: 249 LPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDRE 308
LPDKAIDLIDEAGSR+R+R P + RE ++++ + +EK A+ QDFEKA LRD+E
Sbjct: 371 LPDKAIDLIDEAGSRMRIRRMTAPPDLREFDEKIADVRREKESAIDSQDFEKAASLRDKE 430
Query: 309 MDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKVSTDESD 365
L A K + E +AGD+ VV EVD I +++ TGIPV K++ +ES
Sbjct: 431 KQLLA--------AKTKREKEWKAGDM-DVVAEVDEELIAEVLATATGIPVFKLTEEESS 481
Query: 366 RLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKA 425
RLL+ME+ LHKRVIGQ +A+KA+S+AIRR R GLK+P RP SFIF+GP+GVGK+EL+K
Sbjct: 482 RLLRMEDELHKRVIGQKDAIKALSQAIRRTRAGLKDPKRPGGSFIFAGPSGVGKTELSKT 541
Query: 426 LAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFD 485
LA + FG E+A+I+LDMSEF E+HTVS+L GSPPGYVGY EGGQLTE VRR+P++VVLFD
Sbjct: 542 LAEFLFGDEDALIQLDMSEFSEKHTVSRLFGSPPGYVGYEEGGQLTEKVRRKPFSVVLFD 601
Query: 486 EIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLD 545
E+EKAHPD+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N+G+ I K G +GF
Sbjct: 602 EVEKAHPDIFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNLGTRDISK-GFNLGFAAA 660
Query: 546 YDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRL 605
D K + Y R+K+ V EELKQ+FRPEFLNR+D+++VF QLT+ ++ +I D+M+ V +RL
Sbjct: 661 GDVK-TGYERMKAKVGEELKQHFRPEFLNRVDDIVVFHQLTEDDIIQIVDLMIARVDERL 719
Query: 606 KTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIV 665
K +D+ ++++ ++ + ++GY+P GARPLRR I R +ED ++EK+L E++ G V+V
Sbjct: 720 KDRDMGIELSPEAKKLLAKKGYDPILGARPLRRTIQREIEDQLSEKILFNELRPGHIVVV 779
Query: 666 DVDSDGNVTVLNGSSGAPESLADPLPV 692
+ +G ++AD P+
Sbjct: 780 GTEGEGEEKKFTFRGEEKVTVADAPPI 806
>gi|295395582|ref|ZP_06805776.1| ATP-dependent protease, ATPase subunit [Brevibacterium mcbrellneri
ATCC 49030]
gi|294971601|gb|EFG47482.1| ATP-dependent protease, ATPase subunit [Brevibacterium mcbrellneri
ATCC 49030]
Length = 870
Score = 770 bits (1987), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/675 (56%), Positives = 516/675 (76%), Gaps = 10/675 (1%)
Query: 3 GESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRT 62
G+ + GA G SG+ + L+++G NLT A EGKLDPV+GR+ Q+ERV+Q+L RRT
Sbjct: 147 GKEPASTGAREEGTPSGSLV--LDQFGRNLTAAAREGKLDPVIGREEQMERVMQVLSRRT 204
Query: 63 KNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEER 122
KNNP LIGEPGVGKTA+ EGLAQ I +GDVP+T++ K++ TLD+G LVAG++YRG+FEER
Sbjct: 205 KNNPVLIGEPGVGKTAVVEGLAQAIVAGDVPETLKDKQLYTLDLGSLVAGSRYRGDFEER 264
Query: 123 LKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEY 182
LKK+++EI+ +I+LFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEY
Sbjct: 265 LKKVLKEIRTRGDIVLFIDEIHTLVGAGAAEGAIDAASILKPMLARGELQTIGATTLDEY 324
Query: 183 RKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQ 242
RK+IEKD ALERRFQP++VPEP++D +QIL+GLR++YE HHK+ TD AL +A LS +
Sbjct: 325 RKNIEKDAALERRFQPIQVPEPTLDIAVQILRGLRDQYENHHKVTITDGALEAAVNLSDR 384
Query: 243 YISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAG 302
YI+DR+LPDKAIDLIDEAG+++R+ P+E ++L +++ + K K A+ Q+FE A
Sbjct: 385 YINDRYLPDKAIDLIDEAGAKLRITRMSEPQEIKDLNEKIAEARKRKEVAIDKQNFELAA 444
Query: 303 ELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTD 362
+ R+ EM+L + DK ++ ++ + G G +V E + +++ TGIPV K++ +
Sbjct: 445 DERNTEMELTKE----RDKAEKAWRSGAKGG--GAIVDEELVAEVLAKATGIPVFKLTEE 498
Query: 363 ESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSEL 422
ES RLL+ME+ LHKR+IGQ++A+K++SRAIRR R GLK+P RP SFIF+GPTGVGK+EL
Sbjct: 499 ESSRLLRMEDELHKRIIGQNDAIKSVSRAIRRTRAGLKDPKRPSGSFIFAGPTGVGKTEL 558
Query: 423 AKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVV 482
AKALA + FG E A+I LDMSEF E+HTVS+L GSPPGYVGY EGGQLTE VRRRP+++V
Sbjct: 559 AKALAEFLFGDESALISLDMSEFSEKHTVSRLFGSPPGYVGYEEGGQLTEKVRRRPFSIV 618
Query: 483 LFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGF 542
LFDE+EKAH D+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N+G+ I + G +GF
Sbjct: 619 LFDEVEKAHADIFNSLLQILEDGRLTDSQGREVDFKNTIIIMTTNLGTRDINR-GTPMGF 677
Query: 543 DLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVF 602
D D +SY+R+K V EELKQ+FRPEFLNR+D+ IVF QL K E+ EI D+ L +
Sbjct: 678 QADND-TSTSYDRMKQKVNEELKQHFRPEFLNRVDDTIVFPQLQKAEIVEIVDLFLTRLD 736
Query: 603 DRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDS 662
RL + + ++V++ + + + G++P GARPLRR I + +ED ++EK+L E+ G
Sbjct: 737 TRLADQGMSIEVSDDAKNALADRGFDPVLGARPLRRTIQQDIEDPLSEKILFNELHSGQR 796
Query: 663 VIVDVDSDGNVTVLN 677
+ VDV+ +G +
Sbjct: 797 IYVDVEGEGPLATFT 811
>gi|331699829|ref|YP_004336068.1| ATPase [Pseudonocardia dioxanivorans CB1190]
gi|326954518|gb|AEA28215.1| ATPase AAA-2 domain protein [Pseudonocardia dioxanivorans CB1190]
Length = 847
Score = 769 bits (1986), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/669 (57%), Positives = 517/669 (77%), Gaps = 15/669 (2%)
Query: 3 GESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRT 62
G+ AG G G+ + + L+++G NLT+ A EGKLDPV+GR+ +IERV+Q+L RRT
Sbjct: 147 GKEPAEASAGRGEGTPSSSL-VLDQFGRNLTQQAREGKLDPVIGREKEIERVMQVLSRRT 205
Query: 63 KNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEER 122
KNNP LIGEPGVGKTA+ EGLAQ I G+VP+T++ K++ TLD+G LVAG++YRG+FEER
Sbjct: 206 KNNPVLIGEPGVGKTAVVEGLAQGIVKGEVPETLKDKQLYTLDLGSLVAGSRYRGDFEER 265
Query: 123 LKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEY 182
LKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEY
Sbjct: 266 LKKVLKEIRTRGDIILFIDEIHTLVGAGAAEGAIDAASILKPMLARGELQTIGATTLDEY 325
Query: 183 RKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQ 242
RK++EKDPALERRFQP++V EPSV TI+ILKGLR+RYE HH++ TD ALV+AA L+ +
Sbjct: 326 RKYVEKDPALERRFQPIQVGEPSVTHTIEILKGLRDRYEAHHRVTITDPALVAAATLADR 385
Query: 243 YISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAG 302
YISDRFLPDKAIDLIDEAG+R+R+R P + RE ++++ + ++K A+ QDFE+A
Sbjct: 386 YISDRFLPDKAIDLIDEAGARMRIRRMTAPPDLREFDEKIAGVRRDKESAIDAQDFERAA 445
Query: 303 ELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKV 359
LRD E L Q K + + ++GD+ VV EVD I +++ WTGIPV K+
Sbjct: 446 SLRDTEKQLLGQ--------KSEREKQWKSGDLD-VVAEVDDEQIAEVLANWTGIPVFKL 496
Query: 360 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 419
+ +E+ RLL+ME+ LHKR+IGQ++AVKA+S+AIRR R GLK+P RP SFIF+GP+GVGK
Sbjct: 497 TEEETTRLLRMEDELHKRIIGQEDAVKAVSQAIRRTRAGLKDPKRPSGSFIFAGPSGVGK 556
Query: 420 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 479
+EL+KALA + FG ++A+I++DM EF +R+T S+L G+PPGYVGY EGGQLTE VRR+P+
Sbjct: 557 TELSKALANFLFGEDDALIQIDMGEFHDRYTASRLFGAPPGYVGYEEGGQLTEKVRRKPF 616
Query: 480 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 539
+VVLFDEIEKAH +V+N +LQ+LEDGRLTD +GRTVDFKNT++I TSN+G+ I K
Sbjct: 617 SVVLFDEIEKAHQEVYNTLLQVLEDGRLTDGQGRTVDFKNTVIIFTSNLGTQDISK-AVG 675
Query: 540 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 599
+GF DE S+Y R+K+ V +ELK++FRPEFLNR+D++IVF QLT+ ++ + D+M+
Sbjct: 676 LGFAQSNDEA-SNYERMKTKVHDELKKHFRPEFLNRIDDIIVFHQLTEEQIITMVDLMIT 734
Query: 600 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 659
V +L KD+ +++T + + G++P GARPLRR I R +ED ++EK+L E++
Sbjct: 735 RVEAQLANKDMGIELTPAAKSLLARRGFDPVLGARPLRRTIQREIEDQLSEKILFGEVEP 794
Query: 660 GDSVIVDVD 668
G V+VDV+
Sbjct: 795 GQIVLVDVE 803
>gi|399525068|ref|ZP_10765545.1| Clp amino terminal domain protein [Atopobium sp. ICM58]
gi|398373543|gb|EJN51465.1| Clp amino terminal domain protein [Atopobium sp. ICM58]
Length = 822
Score = 769 bits (1985), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/647 (59%), Positives = 508/647 (78%), Gaps = 8/647 (1%)
Query: 25 LEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLA 84
LE++G NLT+ A E KLDPV+GR+ ++ERV+Q+L RRTKNNP LIGEPGVGKTA+ EGLA
Sbjct: 174 LEQFGRNLTQAARENKLDPVIGRRVEMERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLA 233
Query: 85 QRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVH 144
Q I GDVP+TI+ K++ +LDMG LVAG++YRG+FEERLKK+++EI+ +IILFIDE+H
Sbjct: 234 QAIVHGDVPETIKDKQIYSLDMGSLVAGSRYRGDFEERLKKVLKEIRTRGDIILFIDEIH 293
Query: 145 TLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEP 204
TL+GAGAAEG+IDAA +LKP LARGELQ IGATT DEYRKHIEKD ALERRFQPVKV EP
Sbjct: 294 TLVGAGAAEGSIDAAQMLKPMLARGELQTIGATTNDEYRKHIEKDAALERRFQPVKVEEP 353
Query: 205 SVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRV 264
SV+ET++ILKGLR+RYE HH++ TD A+ +AA+L+ +YISDRFLPDKAIDL+DEAG+R+
Sbjct: 354 SVEETVEILKGLRDRYEAHHRVIITDAAIQAAAELADRYISDRFLPDKAIDLVDEAGARL 413
Query: 265 RLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKE 324
R+R P E REL++++ ++ + K A+ QDFEKA LRD E L + K KE
Sbjct: 414 RIRRMTAPPELRELDEKIAEVRRNKEAAIDDQDFEKAASLRDEESKLSDE-----RKAKE 468
Query: 325 MSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEA 384
+ E+ ++ V + +I +++ TGIPV +++ E+ +LLKME+ LHKRVIGQDEA
Sbjct: 469 EAWKGGESDEIAE-VGDQEIAEVLAMSTGIPVVRLTQTETAKLLKMEDELHKRVIGQDEA 527
Query: 385 VKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSE 444
VKA++++IRR R GLK+PNRP SFIF+GPTGVGK+ELAKALA + FG E+A+I+LDMSE
Sbjct: 528 VKALAQSIRRTRSGLKDPNRPGGSFIFAGPTGVGKTELAKALAEFLFGDEDALIQLDMSE 587
Query: 445 FMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILED 504
F E+HT S+L G+PPGYVGY EGGQLTE VRR+P++VVLFDE+EKAHPD+FN +LQILE+
Sbjct: 588 FSEKHTASRLFGAPPGYVGYDEGGQLTEKVRRKPFSVVLFDEVEKAHPDIFNSLLQILEE 647
Query: 505 GRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEEL 564
GRLTDS+GR VDFKNT++IMT+N+G+ I K G GF D Y R+K+ V EEL
Sbjct: 648 GRLTDSQGRKVDFKNTVIIMTTNLGTRDINK-GVLTGFQT-ADNSTHDYGRMKAKVAEEL 705
Query: 565 KQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVE 624
KQ+FRPEFLNR+D+ IVF LTK E+ I D+M+ ++ R++ +D+ LQ+T+ RE + +
Sbjct: 706 KQHFRPEFLNRVDDTIVFPPLTKPEIARIVDLMIAKLAKRMEAQDMRLQLTDEARELLAD 765
Query: 625 EGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDG 671
G++P GARPLRRAI R +ED+++E++L E++ G V V V +G
Sbjct: 766 VGFDPVLGARPLRRAIQREIEDALSERILFGELQSGQVVTVGVTGEG 812
>gi|284043144|ref|YP_003393484.1| ATPase AAA [Conexibacter woesei DSM 14684]
gi|283947365|gb|ADB50109.1| ATPase AAA-2 domain protein [Conexibacter woesei DSM 14684]
Length = 868
Score = 769 bits (1985), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/679 (56%), Positives = 523/679 (77%), Gaps = 13/679 (1%)
Query: 16 GSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVG 75
G +K+ L+++G NLTKLA +GKLDPVVGR+ ++ER++QIL RR KNNP LIGEPGVG
Sbjct: 169 GKKSSKL--LDQFGRNLTKLASDGKLDPVVGRETEVERIMQILSRRQKNNPVLIGEPGVG 226
Query: 76 KTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDE 135
KTA+ EGLAQRI + DVP+ ++GK++ TLD+ LVAG+KYRGEFEERLKK+M+EI Q +
Sbjct: 227 KTAVVEGLAQRITNADVPELLKGKQIYTLDLAALVAGSKYRGEFEERLKKVMKEITQRGD 286
Query: 136 IILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERR 195
IILFIDE+H L+GAGAAEGAIDAA+ILKP+LARGELQ IGATTLDEYRK++E+D ALERR
Sbjct: 287 IILFIDELHNLVGAGAAEGAIDAASILKPALARGELQTIGATTLDEYRKYLERDAALERR 346
Query: 196 FQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAID 255
FQ ++V PS DET QIL+GLR+RYE HHK+ TDEAL +AA L+ +YISDRFLPDKAID
Sbjct: 347 FQQIRVDPPSTDETFQILQGLRDRYEQHHKVNITDEALTAAADLADRYISDRFLPDKAID 406
Query: 256 LIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQI 315
LIDEA +R+R++ P R+LE+E+ + K A+ Q+FEKA LRD E
Sbjct: 407 LIDEAAARMRIKSMTSPPVYRDLEEEIETTRRNKEAAIEAQEFEKAANLRDAE------- 459
Query: 316 SALVDKGKEMSKAETEAGDVG--PVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEET 373
L K +E+ + + E+G+ G P + E +I IVS WTGIPV K++ E+ +L++ME+
Sbjct: 460 RRLTQKKRELEE-QWESGESGERPSIGEEEIADIVSMWTGIPVFKLTEAETAKLMRMEDE 518
Query: 374 LHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGS 433
LHKRVIGQ AV IS+AIRR+R GLK+P RP SF+F GP+GVGK+ELA+ LA + FG
Sbjct: 519 LHKRVIGQQAAVDVISKAIRRSRAGLKDPKRPTGSFVFLGPSGVGKTELARTLAEFLFGD 578
Query: 434 EEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPD 493
E+AM+R+DMSE+ME+H VS+L+GSPPGY+GY EGGQLTEAVRR+PY+V+L DEIEKAHPD
Sbjct: 579 EDAMVRIDMSEYMEKHAVSRLVGSPPGYIGYDEGGQLTEAVRRKPYSVLLLDEIEKAHPD 638
Query: 494 VFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSY 553
VFN++LQILEDGRLTD++GRTVDF++ ++IMTSN+G+S I + +GF + DE +Y
Sbjct: 639 VFNILLQILEDGRLTDAQGRTVDFRHAIVIMTSNIGASEIAR-NTPLGFAVSDDETGITY 697
Query: 554 NRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQ 613
+ +K+ + ELK+ FRPEFLNR+D++IVF +L K E+KEI +++L+ + + L ++++L+
Sbjct: 698 DDMKTRIMGELKKVFRPEFLNRIDDVIVFHKLAKDEIKEIVELLLRRIRESLAERELQLE 757
Query: 614 VTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNV 673
+TE ++ +V++G++P+ GARPLRRAI R +ED +A+ +L E+ G +V+VD +G
Sbjct: 758 LTEEAKDLLVDKGWDPAMGARPLRRAIQRYIEDPLADFVLRSELMAGGTVMVDRAPEGQE 817
Query: 674 TVLNGSSGAPESLADPLPV 692
++ AP+ P+ V
Sbjct: 818 PEVSIEIIAPKPAPTPVGV 836
>gi|326792086|ref|YP_004309907.1| ATPase AAA [Clostridium lentocellum DSM 5427]
gi|326542850|gb|ADZ84709.1| ATPase AAA-2 domain protein [Clostridium lentocellum DSM 5427]
Length = 822
Score = 769 bits (1985), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/680 (55%), Positives = 530/680 (77%), Gaps = 19/680 (2%)
Query: 4 ESTEAVGAGVGGGSSGNK--MPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRR 61
+ TEA + G K PTL++Y +LT A EGK DP+VGR+ +I+RV+QIL RR
Sbjct: 147 QKTEASFSTTKAGEPATKSTTPTLDKYSRDLTTFAREGKFDPIVGREKEIDRVIQILSRR 206
Query: 62 TKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEE 121
TKNNPCL+GEPGVGKTA+ EGLAQ+IAS ++PD ++GK+V++LD+ +++GTKYRGEFEE
Sbjct: 207 TKNNPCLVGEPGVGKTAVVEGLAQKIASEEIPDLLKGKRVVSLDLSSMISGTKYRGEFEE 266
Query: 122 RLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDE 181
R+ K++EE++ + ++ILFIDE+HT+IGAGAAEGA+DA+NILKPSLARGE+Q +GATTLDE
Sbjct: 267 RINKVIEEVRLAGDVILFIDELHTIIGAGAAEGAMDASNILKPSLARGEVQLVGATTLDE 326
Query: 182 YRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSY 241
YRKHIEKD ALERRFQPV+V EPS +ET++IL+G++++YE+HH+++ TD+A+ +A +LS
Sbjct: 327 YRKHIEKDAALERRFQPVQVEEPSEEETLEILRGIKDKYEVHHQVQITDDAIKAAVKLSA 386
Query: 242 QYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKA 301
+YI+DR+LPDKAIDL+DEA S+VRLR P +ELE++L + ++K A+ +++EKA
Sbjct: 387 RYIADRYLPDKAIDLLDEAASKVRLRAFTAPTNIKELEEQLSSLGEQKEIAIMNEEYEKA 446
Query: 302 GELRDREMDLKAQISALVDKGKEMSKAETEAGDV--GPVVTEVDIQHIVSAWTGIPVEKV 359
E++ +E ++K +I+ +K E +A VV E +I IVS+WT IPV+++
Sbjct: 447 SEIKRKENEIKEKIAN--------AKVEWDAKHTKNNQVVGEEEIADIVSSWTNIPVKRL 498
Query: 360 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 419
+ +E++RL +ME+ LH+RV+GQ+EA+ A+S+A+RR RVGLK+PNRPI SF+F GPTGVGK
Sbjct: 499 AEEETERLKQMEKILHERVVGQEEAIVAVSKAVRRGRVGLKDPNRPIGSFMFLGPTGVGK 558
Query: 420 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 479
+EL KALA FG E AM+R+DMSE+ME+HTVSK+IGSPPGYVGY EGGQLTE VRR+PY
Sbjct: 559 TELTKALAEAMFGDENAMVRVDMSEYMEKHTVSKMIGSPPGYVGYEEGGQLTEKVRRKPY 618
Query: 480 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGS-SVIEKGGR 538
VVLFDEIEKAH DVFN++LQIL+DG +TDS+GR ++FKNT++IMTSN+G+ S+I +
Sbjct: 619 CVVLFDEIEKAHGDVFNILLQILDDGHITDSRGRRINFKNTIIIMTSNIGARSIISP--K 676
Query: 539 RIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIML 598
++GF + ++ + SY +K V EE+K+ F+PEFLNR+DE +VF L+ E++EIADIM+
Sbjct: 677 KVGF-ISTEDAEKSYEDMKKNVMEEVKRTFKPEFLNRIDETLVFHPLSTKEIREIADIMI 735
Query: 599 KEVFDRL-KTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREI 657
K + R+ K IE+Q+TE + + ++GYN +YGARPLRR I +ED +++++L+
Sbjct: 736 KRLITRISKNVGIEIQLTEEALDFLGKKGYNQAYGARPLRRTIQTYIEDKLSDEILSGNF 795
Query: 658 KEGDSVIVDVDSDGNVTVLN 677
KEGD +V V DG V V
Sbjct: 796 KEGD--VVSVTVDGEVCVFT 813
>gi|300088291|ref|YP_003758813.1| ATPase AAA-2 domain-containing protein [Dehalogenimonas
lykanthroporepellens BL-DC-9]
gi|299528024|gb|ADJ26492.1| ATPase AAA-2 domain protein [Dehalogenimonas lykanthroporepellens
BL-DC-9]
Length = 843
Score = 769 bits (1985), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 373/677 (55%), Positives = 507/677 (74%), Gaps = 11/677 (1%)
Query: 14 GGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPG 73
GG S +K P L+ +LT A GKLDPVVGRQ +I+RV+QIL RRTKNNP LIGEPG
Sbjct: 158 AGGRSQSKTPNLDAVSLDLTAAARAGKLDPVVGRQKEIDRVIQILSRRTKNNPALIGEPG 217
Query: 74 VGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQS 133
VGKTAI EGLA RI + DVP+T+E K++++LD+ LVAGTKYRGEFEERLKK++EE++ S
Sbjct: 218 VGKTAIVEGLAHRIVAADVPETLENKRLVSLDIASLVAGTKYRGEFEERLKKILEELRAS 277
Query: 134 DEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALE 193
I++FIDE HT++GAGAAEGA+DAANI+KPSLARGE+Q IGATTLD+YRKH+E+D ALE
Sbjct: 278 GNIVVFIDEFHTMVGAGAAEGAVDAANIMKPSLARGEIQIIGATTLDDYRKHVERDAALE 337
Query: 194 RRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKA 253
RRFQPV V EPS+++TI+IL+G+R RYE HH+L TD+AL +AA ++ +YISDRF+PDKA
Sbjct: 338 RRFQPVLVEEPSLEDTIEILRGIRSRYEEHHRLEITDDALEAAASMASRYISDRFMPDKA 397
Query: 254 IDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKA 313
ID+IDEA SRVR+RH P ++L+K ++K A+ Q ++ A ELR+RE
Sbjct: 398 IDIIDEASSRVRIRHRTKPMPLKDLKKAEDSYRRDKEAALATQQYDFAAELREREYQ--- 454
Query: 314 QISALVDKGKEMSKAETEAGDVG-PVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEE 372
+ +K ++M + E P V++ DI +VS WTG+P+ +++ DE++RLL MEE
Sbjct: 455 ----IAEKRRKMEEEWQEEQGQALPKVSKEDIADVVSMWTGVPLLQLTGDETERLLHMEE 510
Query: 373 TLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFG 432
LH+R+IGQ+EA+ I++A+RRAR GLK+P+RPI +FIF GPTGVGK+ELA+ALA + FG
Sbjct: 511 VLHERIIGQEEAINTIAKAVRRARAGLKDPSRPIGNFIFLGPTGVGKTELARALAQFMFG 570
Query: 433 SEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHP 492
SE++M+R+DMSEFME+ VS+L+G+PPGYVGY EGGQLTEAVRR+ Y ++L DEIEKAH
Sbjct: 571 SEDSMVRIDMSEFMEKFAVSRLVGAPPGYVGYDEGGQLTEAVRRKGYCLILLDEIEKAHA 630
Query: 493 DVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDS- 551
DVFN++LQI +DG LTD+KGR VDF+N+++IMTSN+G+ +I KG IGF DE +
Sbjct: 631 DVFNILLQIFDDGHLTDAKGRRVDFRNSIVIMTSNIGADLIRKGSGTIGFSTVGDENKAV 690
Query: 552 --SYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKD 609
+Y ++K + E+K+ FRPEFLNR+D +VF LT+ +++EI D+ L + +LK K+
Sbjct: 691 EVNYEKMKDKLLGEVKKSFRPEFLNRVDSTVVFHSLTRDQIREIVDLQLVSITTQLKEKN 750
Query: 610 IELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDS 669
I ++VTE ++ + +GY+ YGARPLRR I LLED ++E +L + GD+V+VD
Sbjct: 751 IGIEVTESAKDVLGRKGYDEVYGARPLRRVIQNLLEDRLSEDLLRGDYGPGDTVVVDASG 810
Query: 670 DGNVTVLNGSSGAPESL 686
+G P+ L
Sbjct: 811 EGEELTFTIRHAPPQEL 827
>gi|383830025|ref|ZP_09985114.1| ATPase with chaperone activity, ATP-binding subunit
[Saccharomonospora xinjiangensis XJ-54]
gi|383462678|gb|EID54768.1| ATPase with chaperone activity, ATP-binding subunit
[Saccharomonospora xinjiangensis XJ-54]
Length = 850
Score = 769 bits (1985), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/669 (56%), Positives = 516/669 (77%), Gaps = 15/669 (2%)
Query: 3 GESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRT 62
G+ GAG G G+ + + L+++G NLT A E KLDPV+GR +IERV+Q+L RRT
Sbjct: 147 GKEPAEAGAGRGEGTPSSSL-VLDQFGRNLTASARENKLDPVIGRGKEIERVMQVLSRRT 205
Query: 63 KNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEER 122
KNNP LIGEPGVGKTA+ EGLAQ I G+VP+T++ K++ TLD+G LVAG++YRG+FEER
Sbjct: 206 KNNPVLIGEPGVGKTAVVEGLAQNIVKGEVPETLKDKQLYTLDLGSLVAGSRYRGDFEER 265
Query: 123 LKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEY 182
LKK+++EIK +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTL+EY
Sbjct: 266 LKKVLKEIKTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIGATTLEEY 325
Query: 183 RKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQ 242
RK+IEKD ALERRFQP++V EPS++ TI+ILKGLR+RYE HH++ TD ALV+AA L+ +
Sbjct: 326 RKYIEKDAALERRFQPIQVGEPSLEHTIEILKGLRDRYEAHHRVSITDSALVAAATLADR 385
Query: 243 YISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAG 302
YI+DR+LPDKAIDLIDEAG+R+R+R P + RE ++++ + +EK A+ QDFE+A
Sbjct: 386 YINDRYLPDKAIDLIDEAGARMRIRRMTAPPDLREFDEKIADVRREKESAIDAQDFERAA 445
Query: 303 ELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKV 359
LRD E L Q S + K+ GD+ VV EVD I +++ WTGIPV K+
Sbjct: 446 RLRDEEKTLLGQKSEREKQWKD--------GDL-DVVAEVDDEQIAEVLANWTGIPVFKL 496
Query: 360 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 419
+ +E+ RLL+ME+ LHKR+IGQ++AVKA+S+AIRR R GLK+P RP SFIF+GP+GVGK
Sbjct: 497 TEEETTRLLRMEDELHKRIIGQEDAVKAVSQAIRRTRAGLKDPKRPSGSFIFAGPSGVGK 556
Query: 420 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 479
+EL+KALA + FG ++A+I++DM EF +R+T S+L G+PPGYVGY EGGQLTE VRR+P+
Sbjct: 557 TELSKALANFLFGEDDALIQIDMGEFHDRYTASRLFGAPPGYVGYEEGGQLTEKVRRKPF 616
Query: 480 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 539
+VVLFDEIEKAH +++N +LQ+LEDGRLTD +GRTVDFKNT+LI TSN+G+ I K
Sbjct: 617 SVVLFDEIEKAHQEIYNTLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGTQDISK-SVS 675
Query: 540 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 599
+GF DE Y ++K V EE+K++FRPEFLNR+D++IVF QLT+ ++ ++ D+M+
Sbjct: 676 LGFSSGSDE-GGRYEKMKQKVNEEMKKHFRPEFLNRIDDIIVFHQLTQEQIIQMVDLMVS 734
Query: 600 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 659
V +LK KD+ L++T++ + + + G++P GARPLRR I R +ED ++EK+L E++
Sbjct: 735 RVEQQLKAKDMALELTDKAKALLAKRGFDPVLGARPLRRTIQREIEDQLSEKILFGEVQA 794
Query: 660 GDSVIVDVD 668
G +IVDV+
Sbjct: 795 GQIIIVDVE 803
>gi|441518183|ref|ZP_20999908.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Gordonia
hirsuta DSM 44140 = NBRC 16056]
gi|441454872|dbj|GAC57869.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Gordonia
hirsuta DSM 44140 = NBRC 16056]
Length = 846
Score = 769 bits (1985), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/664 (59%), Positives = 512/664 (77%), Gaps = 18/664 (2%)
Query: 11 AGVGGGSSGNKMPT----LEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNP 66
AG GG SS + P+ L+++G NLT A E KLDPV+GR+ +IERV+Q+L RRTKNNP
Sbjct: 153 AGTGGRSSDSGTPSTSLVLDQFGRNLTAAAAESKLDPVIGREKEIERVMQVLSRRTKNNP 212
Query: 67 CLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKL 126
LIGEPGVGKTA+ EGLAQ I +G+VP+T++ K++ TLD+G LVAG++YRG+FEERLKK+
Sbjct: 213 VLIGEPGVGKTAVVEGLAQAIVAGNVPETLKDKQLYTLDLGSLVAGSRYRGDFEERLKKV 272
Query: 127 MEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHI 186
++EI +IILFIDE+H L+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEYRK+I
Sbjct: 273 LKEINTRGDIILFIDELHQLVGAGAAEGAIDAASILKPKLARGELQTIGATTLDEYRKYI 332
Query: 187 EKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISD 246
EKD ALERRFQPV+V EPSV+ TI+ILKGLR+RYE HHK+ +D AL +AA L+ +YI+D
Sbjct: 333 EKDAALERRFQPVQVGEPSVEHTIEILKGLRDRYEQHHKVSISDGALAAAATLADRYIND 392
Query: 247 RFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRD 306
RFLPDKAIDLIDEAG+R+R+R P + RE + + KEK A+ QDFEKA LRD
Sbjct: 393 RFLPDKAIDLIDEAGARMRIRRMTAPPDLREFDDRIADARKEKESAIDAQDFEKAASLRD 452
Query: 307 REMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKVSTDE 363
+E L IS ++ K+ AGD+ VV EVD I ++ WTGIPV K++ +E
Sbjct: 453 KEKQL---ISERTEREKQW-----RAGDM-DVVAEVDDEEIAEVLGNWTGIPVFKLTEEE 503
Query: 364 SDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELA 423
+ RLL+MEE LHKR+IGQ++AVKA+SRAIRR R GLK+P RP SFIF+GP+GVGK+EL+
Sbjct: 504 TTRLLRMEEELHKRIIGQEDAVKAVSRAIRRTRAGLKDPKRPSGSFIFAGPSGVGKTELS 563
Query: 424 KALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVL 483
KALA + FG ++A+I++DM EF +R T S+L G+PPGYVGY EGGQLTE VRR+P++VVL
Sbjct: 564 KALANFLFGEDDALIQIDMGEFHDRFTASRLFGAPPGYVGYDEGGQLTEKVRRKPFSVVL 623
Query: 484 FDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFD 543
FDEIEKAHP+++N +LQ+LEDGRLTD +GRTVDFKNT+LI TSN+G+ I K +GF
Sbjct: 624 FDEIEKAHPEIYNTLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGTRDISK-AVGMGFS 682
Query: 544 LDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFD 603
D D S+Y R+K V +ELK++FRPEFLNR+D++IVF QL K E+ ++ D+M+ V
Sbjct: 683 KD-DGSGSNYERMKLKVNDELKKHFRPEFLNRIDDVIVFHQLNKDEIVQMVDLMIGRVEQ 741
Query: 604 RLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSV 663
+LK KD++L++TE+ + + G++P GARPLRR I R +ED ++EK+L EI G +
Sbjct: 742 QLKAKDMDLELTEKAKNLLARRGFDPVLGARPLRRTIQREIEDQLSEKILFNEIGAGQII 801
Query: 664 IVDV 667
++DV
Sbjct: 802 LIDV 805
>gi|399526611|ref|ZP_10766373.1| Clp amino terminal domain protein [Actinomyces sp. ICM39]
gi|398362852|gb|EJN46519.1| Clp amino terminal domain protein [Actinomyces sp. ICM39]
Length = 822
Score = 769 bits (1985), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/647 (59%), Positives = 508/647 (78%), Gaps = 8/647 (1%)
Query: 25 LEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLA 84
LE++G NLT+ A E KLDPV+GR+ ++ERV+Q+L RRTKNNP LIGEPGVGKTA+ EGLA
Sbjct: 174 LEQFGRNLTQAARENKLDPVIGRRVEMERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLA 233
Query: 85 QRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVH 144
Q I GDVP+TI+ K++ +LDMG LVAG++YRG+FEERLKK+++EI+ +IILFIDE+H
Sbjct: 234 QAIVHGDVPETIKDKQIYSLDMGSLVAGSRYRGDFEERLKKVLKEIRTRGDIILFIDEIH 293
Query: 145 TLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEP 204
TL+GAGAAEG+IDAA +LKP LARGELQ IGATT DEYRK+IEKD ALERRFQPVKV EP
Sbjct: 294 TLVGAGAAEGSIDAAQMLKPMLARGELQTIGATTNDEYRKYIEKDAALERRFQPVKVEEP 353
Query: 205 SVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRV 264
SVDET++ILKGLR+RYE HH++ TD A+ +AA+L+ +YISDRFLPDKAIDL+DEAG+R+
Sbjct: 354 SVDETVEILKGLRDRYEAHHRVIITDAAIQAAAELADRYISDRFLPDKAIDLVDEAGARL 413
Query: 265 RLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKE 324
R+R P E REL++++ ++ + K A+ QDFEKA LRD E L + K KE
Sbjct: 414 RIRRMTAPPELRELDEKIAEVRRNKEAAIDDQDFEKAASLRDEESKLSEE-----RKAKE 468
Query: 325 MSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEA 384
+ E+ ++ V + +I +++ TGIPV +++ E+ +LLKME+ LHKRVIGQDEA
Sbjct: 469 EAWKGGESDEIAE-VGDQEIAEVLAMSTGIPVVRLTQTETAKLLKMEDELHKRVIGQDEA 527
Query: 385 VKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSE 444
VKA++++IRR R GLK+PNRP SFIF+GPTGVGK+ELAKALA + FG E+A+I+LDMSE
Sbjct: 528 VKALAQSIRRTRSGLKDPNRPGGSFIFAGPTGVGKTELAKALAEFLFGDEDALIQLDMSE 587
Query: 445 FMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILED 504
F E+HT S+L G+PPGYVGY EGGQLTE VRR+P++VVLFDE+EKAHPD+FN +LQILE+
Sbjct: 588 FSEKHTASRLFGAPPGYVGYDEGGQLTEKVRRKPFSVVLFDEVEKAHPDIFNSLLQILEE 647
Query: 505 GRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEEL 564
GRLTDS+GR VDFKNT++IMT+N+G+ I K G GF D Y R+KS V EEL
Sbjct: 648 GRLTDSQGRKVDFKNTVIIMTTNLGTRDINK-GVLTGFQT-ADNSTHDYGRMKSKVAEEL 705
Query: 565 KQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVE 624
KQ+FRPEFLNR+D+ IVF LTK E+ I D+M+ ++ R++ +D+ LQ+T+ RE + +
Sbjct: 706 KQHFRPEFLNRVDDTIVFPPLTKPEIARIVDLMIAKLAKRMEAQDMRLQLTDEARELLAD 765
Query: 625 EGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDG 671
G++P GARPLRRAI R +ED+++E++L E++ G V V V +G
Sbjct: 766 VGFDPVLGARPLRRAIQREIEDALSERILFGELQPGQVVTVGVTGEG 812
>gi|452960301|gb|EME65629.1| DNA binding ATP-dependent peptidase [Rhodococcus ruber BKS 20-38]
Length = 841
Score = 768 bits (1984), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/670 (56%), Positives = 514/670 (76%), Gaps = 16/670 (2%)
Query: 3 GESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRT 62
G+ + G G + + L+++G NLT+ A EGKLDPV+GR +IERV+Q+L RRT
Sbjct: 147 GKEPQESGTSRGEAGTPSTSLVLDQFGRNLTQAALEGKLDPVIGRAKEIERVMQVLSRRT 206
Query: 63 KNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEER 122
KNNP LIGEPGVGKTA+ EGLAQ I +G+VP+T++ K++ TLD+G LVAG++YRG+FEER
Sbjct: 207 KNNPVLIGEPGVGKTAVVEGLAQAIVNGEVPETLKDKQLYTLDLGSLVAGSRYRGDFEER 266
Query: 123 LKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEY 182
LKK+++EI +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEY
Sbjct: 267 LKKVLKEINSRGDIILFIDELHTLVGAGAAEGAIDAASILKPKLARGELQTIGATTLDEY 326
Query: 183 RKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQ 242
RK+IEKD ALERRFQPV+V EP+V+ TI+ILKGLR+RYE HH++ TD+ALV+AA L+ +
Sbjct: 327 RKYIEKDAALERRFQPVQVGEPTVEHTIEILKGLRDRYEAHHRVSITDKALVAAASLADR 386
Query: 243 YISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAG 302
YI+DRFLPDKAIDLIDEAG+R+R+R P + RE + ++ +EK A+ QDFEKA
Sbjct: 387 YINDRFLPDKAIDLIDEAGARMRIRRMTAPPDLREFDDKIADARREKESAIDAQDFEKAA 446
Query: 303 ELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKV 359
LRD+E L AQ + + + AGD+ V+ EVD I +++ WTGIPV K+
Sbjct: 447 NLRDKEKQLVAQ--------RAEREKQWRAGDL-DVIAEVDEEQIAEVLANWTGIPVFKL 497
Query: 360 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 419
+ +E+ RLL+ME+ LHKR+IGQ++AVKA+++AIRR R GLK+P RP SFIF+GP+GVGK
Sbjct: 498 TEEETTRLLRMEDELHKRIIGQEDAVKAVAKAIRRTRAGLKDPKRPAGSFIFAGPSGVGK 557
Query: 420 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 479
+EL+KALA + FG ++A+I++DM EF +R T S+L G+PPGYVGY EGGQLTE VRR+P+
Sbjct: 558 TELSKALANFLFGEDDALIQIDMGEFHDRFTASRLFGAPPGYVGYEEGGQLTEKVRRKPF 617
Query: 480 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 539
+VVLFDEIEKAH +++N +LQ+LEDGRLTD +GRTVDFKNT+LI TSN+G++ I K
Sbjct: 618 SVVLFDEIEKAHQEIYNTLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGTADISKA--- 674
Query: 540 IGFDLDYDE-KDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIML 598
+G +S+Y R+K V +ELK++FRPEFLNR+D++IVF QLT+ ++ E+ D+M+
Sbjct: 675 VGLGFTKGTGAESNYERMKLKVNDELKKHFRPEFLNRIDDIIVFHQLTQEQIIEMVDLMI 734
Query: 599 KEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIK 658
V +LK KD+ +++TE + + + G++P GARPLRR I R +ED ++EK+L EI
Sbjct: 735 GRVEVQLKNKDMGIELTETAKSLLAKRGFDPVLGARPLRRTIQREIEDQLSEKILFNEIG 794
Query: 659 EGDSVIVDVD 668
G V+VDV+
Sbjct: 795 PGQIVLVDVE 804
>gi|376288455|ref|YP_005161021.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
diphtheriae BH8]
gi|371585789|gb|AEX49454.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
diphtheriae BH8]
Length = 877
Score = 768 bits (1984), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/670 (57%), Positives = 512/670 (76%), Gaps = 9/670 (1%)
Query: 24 TLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGL 83
L+++G NLT+ A+EGKLDPVVGR+ +IER++Q+L RRTKNNP LIGEPGVGKTA+ EGL
Sbjct: 183 VLDQFGRNLTQAAKEGKLDPVVGREQEIERIMQVLSRRTKNNPVLIGEPGVGKTAVVEGL 242
Query: 84 AQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEV 143
A I +G VP+T++ K+V +LD+G LVAG++YRG+FEERLKK+++EI Q +IILFIDE+
Sbjct: 243 ALDIVNGKVPETLKDKQVYSLDLGSLVAGSRYRGDFEERLKKVLKEINQRGDIILFIDEI 302
Query: 144 HTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPE 203
HTL+GAGAAEGAIDAA++LKP LARGELQ IGATTLDEYRKHIEKD ALERRFQPV+VPE
Sbjct: 303 HTLVGAGAAEGAIDAASLLKPKLARGELQTIGATTLDEYRKHIEKDAALERRFQPVQVPE 362
Query: 204 PSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSR 263
PSVD TI+ILKGLR+RYE HH++ TD AL +AAQLS +YI+DRFLPDKA+DLIDEAG+R
Sbjct: 363 PSVDMTIEILKGLRDRYEAHHRVSITDGALAAAAQLSDRYINDRFLPDKAVDLIDEAGAR 422
Query: 264 VRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGK 323
+R++ PE R+++ ++ ++ +EK A+ QDFEKA LRD E L + + +K K
Sbjct: 423 MRIKRMTAPESIRKVDDQIAEVRREKEAAIDAQDFEKAAGLRDTERKLGEERA---EKEK 479
Query: 324 EMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDE 383
+ E D+ V E I ++ WTGIPV K++ +ES RLL MEE LHKR+IGQD+
Sbjct: 480 QWRSGSLE--DIAEVGEE-QIAEVLGNWTGIPVFKLTEEESSRLLHMEEELHKRIIGQDD 536
Query: 384 AVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMS 443
AVK++SRAIRR R GLK+P RP SFIF+GP+GVGK+EL+K+LA + FG ++A+I++DM
Sbjct: 537 AVKSVSRAIRRTRAGLKDPRRPSGSFIFAGPSGVGKTELSKSLANFLFGDDDALIQIDMG 596
Query: 444 EFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILE 503
EF +R T S+L G+PPGYVGY EGGQLTE VRR+P++VVLFDEIEKAH +++N +LQ+LE
Sbjct: 597 EFHDRFTASRLFGAPPGYVGYDEGGQLTEKVRRKPFSVVLFDEIEKAHKEIYNTLLQVLE 656
Query: 504 DGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGF-DLDYDEKDSSYNRIKSLVTE 562
+GRLTD +GR VDFKNT+LI TSN+G+ I K +GF + + D Y+R+K V +
Sbjct: 657 EGRLTDGQGRVVDFKNTVLIFTSNLGTQDISK-AVGMGFSSVGEHDADGQYDRMKQKVND 715
Query: 563 ELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERV 622
ELK++FRPEFLNR+DE++VF QLT+ ++ E+ D+++ V L KD+ +++TE+ + +
Sbjct: 716 ELKKHFRPEFLNRIDEIVVFHQLTQEQIVEMVDLLIGRVSKALAQKDMGIELTEKAKNLL 775
Query: 623 VEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDS-DGNVTVLNGSSG 681
+ G++P GARPLRR I R +ED ++EK+L E+ G+ V VDV+ DG + +S
Sbjct: 776 AKRGFDPVLGARPLRRTIQREIEDVLSEKILFGEVGAGEIVTVDVEGWDGESKETDKASF 835
Query: 682 APESLADPLP 691
PLP
Sbjct: 836 TFTPRVKPLP 845
>gi|374610138|ref|ZP_09682931.1| ATPase AAA-2 domain protein [Mycobacterium tusciae JS617]
gi|373551169|gb|EHP77798.1| ATPase AAA-2 domain protein [Mycobacterium tusciae JS617]
Length = 851
Score = 768 bits (1984), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/649 (57%), Positives = 506/649 (77%), Gaps = 15/649 (2%)
Query: 24 TLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGL 83
L+++G NLT A EGKLDPV+GR+ +IERV+Q+L RRTKNNP LIGEPGVGKTA+ EGL
Sbjct: 170 VLDQFGRNLTAAAMEGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGL 229
Query: 84 AQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEV 143
AQ I G+VP+T++ K++ TLD+G LVAG++YRG+FEERLKK+++EI +IILFIDE+
Sbjct: 230 AQAIVHGEVPETLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDEL 289
Query: 144 HTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPE 203
HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEYRK+IEKD ALERRFQPV+V E
Sbjct: 290 HTLVGAGAAEGAIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGE 349
Query: 204 PSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSR 263
P+V+ TI+ILKGLR+RYE HH++ TD A+V+AA L+ +YI+DRFLPDKAIDLIDEAG+R
Sbjct: 350 PTVEHTIEILKGLRDRYEAHHRVSITDPAIVAAATLADRYINDRFLPDKAIDLIDEAGAR 409
Query: 264 VRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGK 323
+R+R P + RE ++++ +EK A+ QDFEKA LRD+E L AQ +
Sbjct: 410 MRIRRMTAPPDLREFDEKIADARREKESAIDAQDFEKAASLRDKEKQLVAQ--------R 461
Query: 324 EMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIG 380
+ + +GD+ VV EVD I ++ WTGIPV K++ +E+ RLL+ME+ +HKR+IG
Sbjct: 462 AEREKQWRSGDL-DVVAEVDDEQIAEVLGNWTGIPVFKLTEEETTRLLRMEDEIHKRIIG 520
Query: 381 QDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRL 440
Q++AVKA+S+AIRR R GLK+P RP SFIF+GP+GVGK+EL+KALA + FG ++A+I++
Sbjct: 521 QEDAVKAVSKAIRRTRAGLKDPKRPSGSFIFAGPSGVGKTELSKALANFLFGDDDALIQI 580
Query: 441 DMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQ 500
DM EF +R T S+L G+PPGYVGY EGGQLTE VRR+P++VVLFDEIEKAH +++N +LQ
Sbjct: 581 DMGEFHDRFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNSLLQ 640
Query: 501 ILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLV 560
+LEDGRLTD +GRTVDFKNT+LI TSN+G+S I K +G +++Y R+K V
Sbjct: 641 VLEDGRLTDGQGRTVDFKNTVLIFTSNLGTSDISKA---VGLGFTQGGGENNYERMKQKV 697
Query: 561 TEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRE 620
+ELK++FRPEFLNR+D++IVF QLT+ E+ ++ ++M+ V +LK KD+ +++T++ +
Sbjct: 698 NDELKKHFRPEFLNRIDDIIVFHQLTRDEIVQMVELMIGRVEKQLKAKDMAMELTDKAKA 757
Query: 621 RVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDS 669
+ + G++P GARPLRR I R +ED ++EK+L E+ G V VDVD+
Sbjct: 758 LLAKRGFDPVLGARPLRRTIQREIEDQLSEKILFEEVGPGQLVKVDVDN 806
>gi|425736428|ref|ZP_18854733.1| ATPase [Brevibacterium casei S18]
gi|425478261|gb|EKU45459.1| ATPase [Brevibacterium casei S18]
Length = 845
Score = 768 bits (1984), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/670 (56%), Positives = 516/670 (77%), Gaps = 12/670 (1%)
Query: 3 GESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRT 62
G+ A G G SG+ + L+++G NLT A EGKLDPV+GR Q++RV+QIL RRT
Sbjct: 147 GKEPVAAGGREEGTPSGSLV--LDQFGRNLTAAAREGKLDPVIGRHEQMQRVMQILSRRT 204
Query: 63 KNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEER 122
KNNP LIGEPGVGKTA+ EGLAQ I +G+VP+ + K++ TLD+G LVAG++YRG+FEER
Sbjct: 205 KNNPVLIGEPGVGKTAVVEGLAQAIVNGEVPEILTDKQLYTLDLGSLVAGSRYRGDFEER 264
Query: 123 LKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEY 182
LKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEY
Sbjct: 265 LKKVLKEIRTRGDIILFIDEIHTLVGAGAAEGAIDAASILKPMLARGELQTIGATTLDEY 324
Query: 183 RKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQ 242
RKHIEKD ALERRFQP++VPEPS+ +I+ILKGLR++YE HHK+ T+ AL +A +S +
Sbjct: 325 RKHIEKDAALERRFQPIQVPEPSLAHSIEILKGLRDKYEAHHKVTITEGALAAAVNMSDR 384
Query: 243 YISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAG 302
YI+DR+LPDKAIDLIDEAG+++R+ +P+E R+LE+++ + K A+ QDFE A
Sbjct: 385 YINDRYLPDKAIDLIDEAGAKLRISRLSVPQEIRDLEEKILEARHRKEAAIDAQDFELAA 444
Query: 303 ELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD-IQHIVSAWTGIPVEKVST 361
RD EM L+ + +E ++A ++G + D I ++++ TGIP+ K++
Sbjct: 445 SERDSEMKLQHE-------KEEQTEAWRKSGKDTSATVDADLIAEVLASATGIPIFKLTE 497
Query: 362 DESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSE 421
+ES RLL+ME+ LHKR+IGQ++AVK+ISRAIRR R GLK+P RP SFIF+GPTGVGK+E
Sbjct: 498 EESSRLLRMEDELHKRIIGQNDAVKSISRAIRRTRAGLKDPKRPSGSFIFAGPTGVGKTE 557
Query: 422 LAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTV 481
LAKALA + FG E+++I LDMSE+ E+HTVS+L GSPPGYVGY EGGQLTE VRR+P++V
Sbjct: 558 LAKALAEFLFGDEDSLISLDMSEYSEKHTVSRLFGSPPGYVGYEEGGQLTEKVRRKPFSV 617
Query: 482 VLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIG 541
VLFDE+EKAH D+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N+G+ + G ++G
Sbjct: 618 VLFDEVEKAHSDIFNSLLQILEDGRLTDSQGREVDFKNTIIIMTTNLGTRDV-SSGLQMG 676
Query: 542 FDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEV 601
F ++ D K ++Y+R+K V EELKQ+FRPEFLNR+D+ IVF QL K E+ EI D+ L+ +
Sbjct: 677 FQVEGDTK-TNYDRMKQRVNEELKQHFRPEFLNRVDDTIVFPQLNKEEIIEIVDLFLERL 735
Query: 602 FDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGD 661
RL + +++++T+ + + + GY+P GARPLRR I +ED ++EK+L +EI G
Sbjct: 736 DTRLADQGMKVELTDAAKNLLADRGYDPVLGARPLRRTIQLEIEDQLSEKILFKEIGRGQ 795
Query: 662 SVIVDVDSDG 671
++ VD++ +G
Sbjct: 796 TIKVDIEGEG 805
>gi|41406559|ref|NP_959395.1| ClpC [Mycobacterium avium subsp. paratuberculosis K-10]
gi|41394908|gb|AAS02778.1| ClpC [Mycobacterium avium subsp. paratuberculosis K-10]
Length = 843
Score = 768 bits (1984), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/648 (58%), Positives = 504/648 (77%), Gaps = 15/648 (2%)
Query: 25 LEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLA 84
L+++G NLT A EGKLDPV+GR+ +IERV+Q+L RRTKNNP LIGEPGVGKTA+ EGLA
Sbjct: 171 LDQFGRNLTAAAMEGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLA 230
Query: 85 QRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVH 144
Q I G VP+T++ K++ TLD+G LVAG++YRG+FEERLKK+++EI +IILFIDE+H
Sbjct: 231 QAIVHGQVPETLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDELH 290
Query: 145 TLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEP 204
TL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEYRK+IEKD ALERRFQPV+V EP
Sbjct: 291 TLVGAGAAEGAIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEP 350
Query: 205 SVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRV 264
+V+ TI+ILKGLR+RYE HH++ TD A+V+AA L+ +YI+DR+LPDKAIDLIDEAG+R+
Sbjct: 351 TVEHTIEILKGLRDRYEAHHRVSITDSAMVAAATLADRYINDRYLPDKAIDLIDEAGARM 410
Query: 265 RLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKE 324
R+R P + RE ++++ + +EK A+ QDFEKA LRDRE L AQ +
Sbjct: 411 RIRRMTAPPDLREFDEKIAEARREKESAIDAQDFEKAASLRDREKQLVAQ--------RA 462
Query: 325 MSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQ 381
+ + +GD+ VV EVD I ++ WTGIPV K++ E+ RLL+ME+ LHKR+IGQ
Sbjct: 463 EREKQWRSGDL-DVVAEVDDEQIAEVLGNWTGIPVFKLTEAETTRLLRMEDELHKRIIGQ 521
Query: 382 DEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLD 441
++AVKA+S+AIRR R GLK+P RP SFIF+GP+GVGK+EL+KALA + FG ++A+I++D
Sbjct: 522 EDAVKAVSKAIRRTRAGLKDPKRPSGSFIFAGPSGVGKTELSKALANFLFGDDDALIQID 581
Query: 442 MSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQI 501
M EF +R T S+L G+PPGYVGY EGGQLTE VRR+P++VVLFDEIEKAH +++N +LQ+
Sbjct: 582 MGEFHDRFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNSLLQV 641
Query: 502 LEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVT 561
LEDGRLTD +G TVDFKNT+LI TSN+G+S I K +G +++Y R+K V
Sbjct: 642 LEDGRLTDGQGCTVDFKNTVLIFTSNLGTSDISKP---VGLGFTQGGGENNYERMKQKVN 698
Query: 562 EELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRER 621
+ELK++FRPEFLNR+D++IVF QLT+ E+ + D+M+ V +LK+KD++L +T++ +
Sbjct: 699 DELKKHFRPEFLNRIDDIIVFHQLTRDEIIRMVDLMITRVAGQLKSKDMDLVLTDKAKAL 758
Query: 622 VVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDS 669
+ + G++P GARPLRR I R +ED ++EK+L E+ G V VDVD+
Sbjct: 759 LAKRGFDPVLGARPLRRTIQREIEDQLSEKILFEEVGPGQIVTVDVDN 806
>gi|433650481|ref|YP_007295483.1| ATPase with chaperone activity, ATP-binding subunit [Mycobacterium
smegmatis JS623]
gi|433300258|gb|AGB26078.1| ATPase with chaperone activity, ATP-binding subunit [Mycobacterium
smegmatis JS623]
Length = 849
Score = 768 bits (1983), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 376/648 (58%), Positives = 505/648 (77%), Gaps = 15/648 (2%)
Query: 25 LEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLA 84
L+++G NLT A EGKLDPV+GR+ +IERV+Q+L RRTKNNP LIGEPGVGKTA+ EGLA
Sbjct: 171 LDQFGRNLTAAAMEGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLA 230
Query: 85 QRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVH 144
Q I G+VP+T++ K++ TLD+G LVAG++YRG+FEERLKK+++EI +IILFIDE+H
Sbjct: 231 QAIVHGEVPETLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDELH 290
Query: 145 TLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEP 204
TL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEYRK+IEKD ALERRFQPV+V EP
Sbjct: 291 TLVGAGAAEGAIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEP 350
Query: 205 SVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRV 264
+V+ TI+ILKGLR+RYE HH++ TD A+V+AA L+ +YI+DRFLPDKAIDLIDEAG+R+
Sbjct: 351 TVEHTIEILKGLRDRYEAHHRVSITDGAMVAAATLADRYINDRFLPDKAIDLIDEAGARM 410
Query: 265 RLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKE 324
R+R P + R+ ++++ + +EK A+ QDFEKA LRD+E L AQ +
Sbjct: 411 RIRRMTAPPDLRDFDEKIAEARREKESAIDAQDFEKAASLRDKEKQLVAQ--------RA 462
Query: 325 MSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQ 381
+ + +GD+ VV EVD I ++ WTGIPV K++ E+ RLL+ME+ LHKR+IGQ
Sbjct: 463 EREKQWRSGDL-DVVAEVDDEQIAEVLGNWTGIPVFKLTEAETTRLLRMEDELHKRIIGQ 521
Query: 382 DEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLD 441
++AVKA+S+AIRR R GLK+P RP SFIF+GP+GVGK+EL+KALA + FG ++A+I++D
Sbjct: 522 EDAVKAVSKAIRRTRAGLKDPKRPSGSFIFAGPSGVGKTELSKALAEFLFGDDDALIQID 581
Query: 442 MSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQI 501
M EF +R T S+L G+PPGYVGY EGGQLTE VRR+P++VVLFDEIEKAH +++N +LQ+
Sbjct: 582 MGEFHDRFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNSLLQV 641
Query: 502 LEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVT 561
LEDGRLTD +GRTVDFKNT+LI TSN+G+S I K +G +++Y R+K V
Sbjct: 642 LEDGRLTDGQGRTVDFKNTVLIFTSNLGTSDISKA---VGLGFTQGGGENNYERMKQKVN 698
Query: 562 EELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRER 621
+ELK++FRPEFLNR+D++IVF QLT+ E+ + D+M+ V +LK KD+ + +T++ +
Sbjct: 699 DELKKHFRPEFLNRIDDIIVFHQLTRDEIITMVDLMIGRVSKQLKGKDMAMVLTDKAKSL 758
Query: 622 VVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDS 669
+ + G++P GARPLRR I R +ED+++EK+L E+ G V VDVD+
Sbjct: 759 LAKRGFDPVLGARPLRRTIQREIEDALSEKILFEEVGPGQLVTVDVDN 806
>gi|376243534|ref|YP_005134386.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
diphtheriae CDCE 8392]
gi|372106776|gb|AEX72838.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
diphtheriae CDCE 8392]
Length = 878
Score = 768 bits (1983), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/674 (56%), Positives = 514/674 (76%), Gaps = 17/674 (2%)
Query: 24 TLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGL 83
L+++G NLT+ A+EGKLDPVVGR+ +IER++Q+L RRTKNNP LIGEPGVGKTA+ EGL
Sbjct: 183 VLDQFGRNLTQAAKEGKLDPVVGREQEIERIMQVLSRRTKNNPVLIGEPGVGKTAVVEGL 242
Query: 84 AQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEV 143
A I +G VP+T++ K+V +LD+G LVAG++YRG+FEERLKK+++EI Q +IILFIDE+
Sbjct: 243 ALDIVNGKVPETLKDKQVYSLDLGSLVAGSRYRGDFEERLKKVLKEINQRGDIILFIDEI 302
Query: 144 HTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPE 203
HTL+GAGAAEGAIDAA++LKP LARGELQ IGATTLDEYRKHIEKD ALERRFQPV+VPE
Sbjct: 303 HTLVGAGAAEGAIDAASLLKPKLARGELQTIGATTLDEYRKHIEKDAALERRFQPVQVPE 362
Query: 204 PSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSR 263
PSVD TI+ILKGLR+RYE HH++ TD AL +AAQLS +YI+DRFLPDKA+DLIDEAG+R
Sbjct: 363 PSVDMTIEILKGLRDRYEAHHRVSITDGALAAAAQLSDRYINDRFLPDKAVDLIDEAGAR 422
Query: 264 VRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGK 323
+R++ PE R+++ ++ ++ +EK A+ QDFEKA LRD E L G+
Sbjct: 423 MRIKRMTAPESIRKVDDQIAEVRREKEAAIDAQDFEKAAGLRDTERKL----------GE 472
Query: 324 EMSKAETE--AGDVGPV--VTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVI 379
E ++ E + +GD+ + V E I ++ WTGIPV K++ +ES RLL MEE LH R+I
Sbjct: 473 ERAEKEKQWRSGDLEDIAEVGEEQIAEVLGNWTGIPVFKLTEEESSRLLHMEEELHTRII 532
Query: 380 GQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIR 439
GQD+AVK++SRAIRR R GLK+P RP SFIF+GP+GVGK+EL+K+LA + FG ++A+I+
Sbjct: 533 GQDDAVKSVSRAIRRTRAGLKDPRRPSGSFIFAGPSGVGKTELSKSLANFLFGDDDALIQ 592
Query: 440 LDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMML 499
+DM EF +R T S+L G+PPGYVGY EGGQLTE VRR+P++VVLFDEIEKAH +++N +L
Sbjct: 593 IDMGEFHDRFTASRLFGAPPGYVGYDEGGQLTEKVRRKPFSVVLFDEIEKAHKEIYNTLL 652
Query: 500 QILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGF-DLDYDEKDSSYNRIKS 558
Q+LE+GRLTD +GR VDFKNT+LI TSN+G+ I K +GF + + D Y+R+K
Sbjct: 653 QVLEEGRLTDGQGRVVDFKNTVLIFTSNLGTQDISK-AVGMGFSSVGEHDADGQYDRMKQ 711
Query: 559 LVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERF 618
V +ELK++FRPEFLNR+DE++VF QLT+ ++ E+ D+++ V L KD+ +++TE+
Sbjct: 712 KVNDELKKHFRPEFLNRIDEIVVFHQLTQEQIVEMVDLLIGRVSKALAQKDMGIELTEKA 771
Query: 619 RERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDS-DGNVTVLN 677
+ + + G++P GARPLRR I R +ED ++EK+L E+ G+ V VDV+ DG +
Sbjct: 772 KNLLAKRGFDPVLGARPLRRTIQREIEDVLSEKILFGEVGAGEIVTVDVEGWDGESKETD 831
Query: 678 GSSGAPESLADPLP 691
+S PLP
Sbjct: 832 KASFTFTPRVKPLP 845
>gi|260437887|ref|ZP_05791703.1| negative regulator of genetic competence ClpC/MecB [Butyrivibrio
crossotus DSM 2876]
gi|292809637|gb|EFF68842.1| negative regulator of genetic competence ClpC/MecB [Butyrivibrio
crossotus DSM 2876]
Length = 815
Score = 768 bits (1983), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 379/659 (57%), Positives = 504/659 (76%), Gaps = 9/659 (1%)
Query: 20 NKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAI 79
++ PTL++Y +LT LAEEGKLDPV+GR+ +I+RV+QI RRTKNNPCL+GEPGVGKTA+
Sbjct: 163 SQTPTLDQYSRDLTALAEEGKLDPVIGREREIQRVIQIGSRRTKNNPCLVGEPGVGKTAV 222
Query: 80 AEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILF 139
EG+A +IA G+VPDTI GK+++TLD+ +VAG+KYRGEFEER+KK+++E++ + +ILF
Sbjct: 223 VEGIAIKIAEGNVPDTIRGKRLLTLDLSGMVAGSKYRGEFEERIKKVIKEVRAAGNVILF 282
Query: 140 IDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPV 199
IDE+HT+IGAG AEGAIDA+NILKPSLARGE+Q IGATT+DEYRK+IEKD ALERRFQPV
Sbjct: 283 IDELHTIIGAGGAEGAIDASNILKPSLARGEVQIIGATTIDEYRKYIEKDAALERRFQPV 342
Query: 200 KVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDE 259
V EPS DE +ILKGL+E YE HH + TD AL SA +LS +YI+DRFLPDKAIDLIDE
Sbjct: 343 NVDEPSEDEAYEILKGLKETYETHHGVTITDGALHSAVKLSKRYINDRFLPDKAIDLIDE 402
Query: 260 AGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALV 319
A S+VRL PEE + E E+ ++ +K EA++ + +EKAGE++ +++ ++ L
Sbjct: 403 ASSKVRLGAFIKPEEISKTEAEIEKLEADKEEAIKAEAYEKAGEIKKKQLKKYEKLEKL- 461
Query: 320 DKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVI 379
+K + E + VV E I +VS WT IPV K+S ES+RL+K+EETLH+RV+
Sbjct: 462 -----NTKWQNEKNNRNLVVDEESIALVVSDWTKIPVNKLSIGESERLMKLEETLHERVV 516
Query: 380 GQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIR 439
GQDEAV +I+RAIRR RVGLK+P RPI SF+F GPTGVGK+EL+K LA FG+E ++IR
Sbjct: 517 GQDEAVTSIARAIRRGRVGLKDPKRPIGSFLFLGPTGVGKTELSKTLADAMFGNENSLIR 576
Query: 440 LDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMML 499
+DMSE+ME+H+VSK+IGSPPGYVGY EGGQL+E VRR PY+V+LFDEIEKAHPDVFN++L
Sbjct: 577 VDMSEYMEKHSVSKMIGSPPGYVGYEEGGQLSEKVRRNPYSVILFDEIEKAHPDVFNVLL 636
Query: 500 QILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSL 559
QIL+DG +TDS GR VDFKNT++IMTSN G+ I + +GF+ D + Y +K+
Sbjct: 637 QILDDGVVTDSSGRKVDFKNTIIIMTSNAGAENI-VSPKNLGFNTSKD-PEQDYKNMKNK 694
Query: 560 VTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTK-DIELQVTERF 618
V +E+K+ F+PEFLNR+DEMIVF LTK V I DIM+ + R+K + +I +++++
Sbjct: 695 VMDEVKRIFKPEFLNRIDEMIVFHMLTKENVARIVDIMMNSINKRIKEQLNITIELSDAA 754
Query: 619 RERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTVLN 677
+ +V+ GY+ YGARPL+RA+ + +ED +AE++L IK D V VD D V +
Sbjct: 755 KSYIVDAGYDEKYGARPLKRALQQKVEDELAEQILEGRIKSSDVVYVDKKEDSEKLVFS 813
>gi|333992525|ref|YP_004525139.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium sp.
JDM601]
gi|333488493|gb|AEF37885.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium sp.
JDM601]
Length = 821
Score = 768 bits (1983), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/649 (57%), Positives = 503/649 (77%), Gaps = 15/649 (2%)
Query: 24 TLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGL 83
L+++G NLT A EGKLDPV+GR+ +IERV+Q+L RRTKNNP LIGEPGVGKTA+ EGL
Sbjct: 149 VLDQFGRNLTAAAMEGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGL 208
Query: 84 AQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEV 143
AQ I +G+VP+T++ K++ TLD+G LVAG++YRG+FEERLKK+++EI +IILFIDE+
Sbjct: 209 AQAIVAGEVPETLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDEL 268
Query: 144 HTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPE 203
HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEYRK+IEKD ALERRFQPV+V E
Sbjct: 269 HTLVGAGAAEGAIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGE 328
Query: 204 PSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSR 263
P+V+ TI+ILKGLR+RYE HH++ +D A+V+AA L+ +YI+DRFLPDKAIDLIDEAG+R
Sbjct: 329 PTVEHTIEILKGLRDRYEAHHRVSISDSAIVAAATLADRYINDRFLPDKAIDLIDEAGAR 388
Query: 264 VRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGK 323
+R+R P + RE ++++ +EK A+ QDFEKA LRDRE L AQ +
Sbjct: 389 MRIRRMTAPPDLREFDEKIADARREKESAIDAQDFEKAASLRDREKQLVAQ--------R 440
Query: 324 EMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIG 380
+ + AGD+ VV EVD I ++ WTGIPV K++ E+ RLL+ME+ LHKR+IG
Sbjct: 441 AEREKQWRAGDL-DVVAEVDDEQIAEVLGNWTGIPVFKLTEAETTRLLRMEDELHKRIIG 499
Query: 381 QDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRL 440
Q +AV A+S+AIRR R GLK+P RP SFIF+GP+GVGK+EL+KALA + FG ++A+I++
Sbjct: 500 QKDAVNAVSKAIRRTRAGLKDPKRPSGSFIFAGPSGVGKTELSKALAEFLFGDDDALIQI 559
Query: 441 DMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQ 500
DM EF +R T S+L G+PPGYVGY EGGQLTE VRR+P++VVLFDEIEKAH +++N +LQ
Sbjct: 560 DMGEFHDRFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNSLLQ 619
Query: 501 ILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLV 560
+LEDGRLTD +GRTVDFKN +LI TSN+G+S I K +G +++Y R+K V
Sbjct: 620 VLEDGRLTDGQGRTVDFKNCVLIFTSNLGTSDISKA---VGLGFTQGGGENNYERMKLKV 676
Query: 561 TEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRE 620
+ELK++FRPEFLNR+D++IVF QL+K E+ ++ D+M+ V +LK KD+++ ++++ +
Sbjct: 677 NDELKKHFRPEFLNRIDDIIVFHQLSKEEIIQMVDLMIGRVAKQLKAKDMDIALSDKAKS 736
Query: 621 RVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDS 669
+ + G++P GARPLRR I R +ED ++EK+L E+ G V VDVD+
Sbjct: 737 LLAKRGFDPVLGARPLRRTIQREIEDQLSEKILFEELGPGQLVTVDVDN 785
>gi|154508516|ref|ZP_02044158.1| hypothetical protein ACTODO_01017 [Actinomyces odontolyticus ATCC
17982]
gi|153798150|gb|EDN80570.1| ATPase family associated with various cellular activities (AAA)
[Actinomyces odontolyticus ATCC 17982]
Length = 826
Score = 768 bits (1983), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/647 (59%), Positives = 508/647 (78%), Gaps = 8/647 (1%)
Query: 25 LEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLA 84
LE++G NLT+ A E KLDPV+GR+ ++ERV+Q+L RRTKNNP LIGEPGVGKTA+ EGLA
Sbjct: 178 LEQFGRNLTQAARENKLDPVIGRRVEMERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLA 237
Query: 85 QRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVH 144
Q I GDVP+TI+ K++ +LDMG LVAG++YRG+FEERLKK+++EI+ +IILFIDE+H
Sbjct: 238 QAIVHGDVPETIKDKQIYSLDMGSLVAGSRYRGDFEERLKKVLKEIRTRGDIILFIDEIH 297
Query: 145 TLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEP 204
TL+GAGAAEG+IDAA +LKP LARGELQ IGATT DEYRK+IEKD ALERRFQPVKV EP
Sbjct: 298 TLVGAGAAEGSIDAAQMLKPMLARGELQTIGATTNDEYRKYIEKDAALERRFQPVKVEEP 357
Query: 205 SVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRV 264
SVDET++ILKGLR+RYE HH++ TD A+ +AA+L+ +YISDRFLPDKAIDL+DEAG+R+
Sbjct: 358 SVDETVEILKGLRDRYEAHHRVIITDAAIQAAAELADRYISDRFLPDKAIDLVDEAGARL 417
Query: 265 RLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKE 324
R+R P E RE+++++ ++ + K A+ QDFEKA LRD E L + K KE
Sbjct: 418 RIRRMTAPPELREIDEKIAEVRRNKEAAIDDQDFEKAASLRDEESKLNEE-----RKAKE 472
Query: 325 MSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEA 384
+ E+ ++ V + +I +++ TGIPV +++ E+ +LLKME+ LHKRVIGQDEA
Sbjct: 473 EAWKGGESDEIAE-VGDQEIAEVLAMSTGIPVVRLTQTETAKLLKMEDELHKRVIGQDEA 531
Query: 385 VKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSE 444
VKA++++IRR R GLK+PNRP SFIF+GPTGVGK+ELAKALA + FG E+A+I+LDMSE
Sbjct: 532 VKALAQSIRRTRSGLKDPNRPGGSFIFAGPTGVGKTELAKALAEFLFGDEDALIQLDMSE 591
Query: 445 FMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILED 504
F E+HT S+L G+PPGYVGY EGGQLTE VRR+P++VVLFDE+EKAHPD+FN +LQILE+
Sbjct: 592 FSEKHTASRLFGAPPGYVGYDEGGQLTEKVRRKPFSVVLFDEVEKAHPDIFNSLLQILEE 651
Query: 505 GRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEEL 564
GRLTDS+GR VDFKNT++IMT+N+G+ I K G GF D Y R+KS V EEL
Sbjct: 652 GRLTDSQGRKVDFKNTVIIMTTNLGTRDINK-GVLTGFQT-ADNSTHDYGRMKSKVAEEL 709
Query: 565 KQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVE 624
KQ+FRPEFLNR+D+ IVF LTK E+ I D+M+ ++ R++ +D+ LQ+T+ RE + +
Sbjct: 710 KQHFRPEFLNRVDDTIVFPPLTKPEISRIVDLMIAKLAKRMEAQDMRLQLTDEARELLAD 769
Query: 625 EGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDG 671
G++P GARPLRRAI R +ED+++E++L E++ G V V V +G
Sbjct: 770 VGFDPVLGARPLRRAIQREIEDALSERILFGELQPGQVVTVGVTGEG 816
>gi|120406306|ref|YP_956135.1| ATPase [Mycobacterium vanbaalenii PYR-1]
gi|119959124|gb|ABM16129.1| ATPase AAA-2 domain protein [Mycobacterium vanbaalenii PYR-1]
Length = 847
Score = 768 bits (1983), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 376/647 (58%), Positives = 504/647 (77%), Gaps = 15/647 (2%)
Query: 25 LEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLA 84
L+++G NLT A EGKLDPV+GR+ +IERV+Q+L RRTKNNP LIGEPGVGKTA+ EGLA
Sbjct: 171 LDQFGRNLTAAAMEGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLA 230
Query: 85 QRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVH 144
Q I G+VP+T++ K++ TLD+G LVAG++YRG+FEERLKK+++EI +IILFIDE+H
Sbjct: 231 QAIVHGEVPETLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDELH 290
Query: 145 TLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEP 204
TL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEYRK+IEKD ALERRFQPV+V EP
Sbjct: 291 TLVGAGAAEGAIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEP 350
Query: 205 SVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRV 264
+V+ TI+ILKGLR+RYE HH++ TD ALV+AA L+ +YI+DRFLPDKAIDLIDEAG+R+
Sbjct: 351 TVEHTIEILKGLRDRYEAHHRVSITDSALVAAATLADRYINDRFLPDKAIDLIDEAGARM 410
Query: 265 RLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKE 324
R+R P + RE ++++ +EK A+ QDFEKA LRD+E L AQ +
Sbjct: 411 RIRRMTAPPDLREFDEKIADARREKESAIDAQDFEKAASLRDKEKQLVAQ--------RA 462
Query: 325 MSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQ 381
+ + +GD+ VV EVD I ++ WTGIPV K++ +E+ RLL+ME+ LHKR+IGQ
Sbjct: 463 EREKQWRSGDL-DVVAEVDDEQIAEVLGNWTGIPVFKLTEEETTRLLRMEDELHKRIIGQ 521
Query: 382 DEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLD 441
++AVKA+S+AIRR R GLK+P RP SFIF+GP+GVGK+EL+KALA + FG ++A+I++D
Sbjct: 522 EDAVKAVSKAIRRTRAGLKDPKRPSGSFIFAGPSGVGKTELSKALANFLFGDDDALIQID 581
Query: 442 MSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQI 501
M EF +R T S+L G+PPGYVGY EGGQLTE VRR+P++VVLFDEIEKAH +++N +LQ+
Sbjct: 582 MGEFHDRFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNSLLQV 641
Query: 502 LEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVT 561
LEDGRLTD +GRTVDFKNT+LI TSN+G+S I K +G +++Y R+K V
Sbjct: 642 LEDGRLTDGQGRTVDFKNTVLIFTSNLGTSDISKA---VGLGFTQGGGENNYERMKQKVH 698
Query: 562 EELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRER 621
+ELK++FRPEFLNR+D++IVF QLT+ E+ ++ D+M+ V +L KD+ +++T++ +
Sbjct: 699 DELKKHFRPEFLNRIDDIIVFHQLTQDEIIKMVDLMIGRVSKQLAAKDMTMELTDKAKSL 758
Query: 622 VVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVD 668
+ + G++P GARPLRR I R +ED ++EK+L E+ G V VDV+
Sbjct: 759 LAKRGFDPVLGARPLRRTIQREIEDQLSEKILFEEVGPGQLVTVDVE 805
>gi|357390336|ref|YP_004905176.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Kitasatospora
setae KM-6054]
gi|311896812|dbj|BAJ29220.1| putative ATP-dependent Clp protease ATP-binding subunit ClpC
[Kitasatospora setae KM-6054]
Length = 838
Score = 768 bits (1982), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/674 (58%), Positives = 519/674 (77%), Gaps = 16/674 (2%)
Query: 4 ESTEAVGAGVGGGSSGNKMPTL--EEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRR 61
++T A GG + G +L +++G NLT+ A E KLDPV+GR+ +IERV+Q+L RR
Sbjct: 146 QTTGKESATAGGPAEGTPSTSLVLDQFGRNLTQAAREAKLDPVIGREKEIERVMQVLSRR 205
Query: 62 TKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEE 121
TKNNP LIGEPGVGKTA+ EGLAQ I G+VP+T++ K++ TLD+G LVAG++YRG+FEE
Sbjct: 206 TKNNPVLIGEPGVGKTAVVEGLAQAIVKGEVPETLKDKQLYTLDLGALVAGSRYRGDFEE 265
Query: 122 RLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDE 181
RLKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDE
Sbjct: 266 RLKKVLKEIRTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIGATTLDE 325
Query: 182 YRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSY 241
YRKH+EKD ALERRFQP++V EPS+ TI+ILKGLR+RYE HH++ TD ALV+AA L+
Sbjct: 326 YRKHLEKDAALERRFQPIQVAEPSLAHTIEILKGLRDRYEAHHRVSITDAALVAAATLAD 385
Query: 242 QYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKA 301
+YISDRFLPDKAIDLIDEAGSR+R+R P + RE ++++ + +EK A+ QDFEKA
Sbjct: 386 RYISDRFLPDKAIDLIDEAGSRMRIRRMTAPPDLREFDEKIADVRREKESAIDAQDFEKA 445
Query: 302 GELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEK 358
LRD E L + K + E +AGD+ VV EVD I +++ TGIPV K
Sbjct: 446 ASLRDNEKQLL--------QAKAKREKEWKAGDM-DVVAEVDEELIAEVLATATGIPVFK 496
Query: 359 VSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVG 418
++ +ES RLL+ME+ LHKRVIGQ++A+KA+S+AIRR R GLK+P RP SFIF+GP+GVG
Sbjct: 497 LTEEESSRLLRMEDELHKRVIGQEDAIKALSQAIRRTRAGLKDPKRPGGSFIFAGPSGVG 556
Query: 419 KSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRP 478
K+EL+K LA + FG E+A+I LDMSEF E+HTVS+L GSPPGYVGY EGGQLTE VRR+P
Sbjct: 557 KTELSKTLAEFLFGDEDALIALDMSEFSEKHTVSRLFGSPPGYVGYEEGGQLTEKVRRKP 616
Query: 479 YTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR 538
++VVLFDE+EKAHPD+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N+G+ I K G
Sbjct: 617 FSVVLFDEVEKAHPDIFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNLGTRDISK-GF 675
Query: 539 RIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIML 598
+GF D + + Y R+K+ V EELKQ+FRPEFLNR+D+++VF QL++ + EI D+M+
Sbjct: 676 NLGFAATGDVQ-AGYERMKAKVGEELKQHFRPEFLNRVDDIVVFHQLSEANIIEIVDLMI 734
Query: 599 KEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIK 658
V R+K +D+ ++++ + + + GY+P GARPLRR I R +ED ++EK+L E++
Sbjct: 735 ARVDQRMKDRDMGIELSPEAKSLLAKRGYDPILGARPLRRTIQREIEDHLSEKILFGELR 794
Query: 659 EGDSVIVDVDSDGN 672
G V+V V+ +G
Sbjct: 795 SGHIVVVGVEGEGK 808
>gi|379706683|ref|YP_005261888.1| protein disaggregation chaperone [Nocardia cyriacigeorgica GUH-2]
gi|374844182|emb|CCF61244.1| protein disaggregation chaperone [Nocardia cyriacigeorgica GUH-2]
Length = 830
Score = 768 bits (1982), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/647 (59%), Positives = 505/647 (78%), Gaps = 14/647 (2%)
Query: 25 LEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLA 84
L+++G NLT+ A EGKLDPV+GR +IERV+Q+L RRTKNNP LIGEPGVGKTA+ EGLA
Sbjct: 147 LDQFGRNLTQAALEGKLDPVIGRSKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLA 206
Query: 85 QRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVH 144
Q I +G+VP+T++ K++ TLD+G LVAG++YRG+FEERLKK+++EI +IILFIDE+H
Sbjct: 207 QAIVNGEVPETLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDELH 266
Query: 145 TLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEP 204
TL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEYRK+IEKD ALERRFQPV+V EP
Sbjct: 267 TLVGAGAAEGAIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEP 326
Query: 205 SVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRV 264
+V+ TI ILKGLR+RYE HH++ TD ALV+AA L+ +YI+DRFLPDKAIDLIDEAG+R+
Sbjct: 327 TVEHTINILKGLRDRYEAHHRVSITDGALVAAATLADRYINDRFLPDKAIDLIDEAGARM 386
Query: 265 RLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKE 324
R+R P + RE + ++ +EK A+ QDFEKA LRD+E LV K E
Sbjct: 387 RIRRMTAPPDLREFDDKIADARREKESAIDAQDFEKAARLRDKE-------KQLVAKRAE 439
Query: 325 MSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQ 381
K + +GD+ VV EVD I +++ WTGIPV K++ +E+ RLL+ME+ LHKR+IGQ
Sbjct: 440 REK-QWRSGDL-DVVAEVDDEQIAEVLANWTGIPVFKLTEEETTRLLRMEDELHKRIIGQ 497
Query: 382 DEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLD 441
++AVKA+S+AIRR R GLK+P RP SFIF+GP+GVGK+EL+KALA + FG ++A+I++D
Sbjct: 498 EDAVKAVSKAIRRTRAGLKDPKRPSGSFIFAGPSGVGKTELSKALANFLFGDDDALIQID 557
Query: 442 MSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQI 501
M EF +R T S+L G+PPGYVGY EGGQLTE VRR+P++VVLFDEIEKAH +++N +LQ+
Sbjct: 558 MGEFHDRFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNTLLQV 617
Query: 502 LEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVT 561
LEDGRLTD +GRTVDFKNT+LI TSN+G+S I K +GF + + S+Y R+K V
Sbjct: 618 LEDGRLTDGQGRTVDFKNTVLIFTSNLGTSDISK-AVGLGFS-QSNAEGSNYERMKLKVN 675
Query: 562 EELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRER 621
+ELK++FRPEFLNR+D++IVF QLT ++ E+ D+M+ V +LK KD+ L+++ +
Sbjct: 676 DELKKHFRPEFLNRIDDVIVFHQLTTEQIVEMVDLMIARVEKQLKNKDMALELSANAKSL 735
Query: 622 VVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVD 668
+ + G++P GARPLRR I R +ED ++EK+L EI G +V VDV+
Sbjct: 736 LAKRGFDPVLGARPLRRTIQREIEDQLSEKILFGEIGPGQTVSVDVE 782
>gi|212716932|ref|ZP_03325060.1| hypothetical protein BIFCAT_01876 [Bifidobacterium catenulatum DSM
16992 = JCM 1194]
gi|212660217|gb|EEB20792.1| hypothetical protein BIFCAT_01876 [Bifidobacterium catenulatum DSM
16992 = JCM 1194]
Length = 858
Score = 768 bits (1982), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 376/647 (58%), Positives = 512/647 (79%), Gaps = 8/647 (1%)
Query: 25 LEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLA 84
L+++G NLT A GKLDPV+GR +IERV+ +L RRTKNNP LIGEPGVGKTA+ EGLA
Sbjct: 175 LDQFGRNLTAEAAAGKLDPVIGRSSEIERVMVVLSRRTKNNPVLIGEPGVGKTAVVEGLA 234
Query: 85 QRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVH 144
Q+I +GDVP+T++GK+V +LD+G +VAG++YRG+FEERLKK+++EIK +I+LFIDE+H
Sbjct: 235 QKINAGDVPETLKGKQVYSLDLGSMVAGSRYRGDFEERLKKVLKEIKTRGDIVLFIDEIH 294
Query: 145 TLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEP 204
T++GAG+A+GA+ A+++LKP LARGELQ IGATT DEYRK+IEKD ALERRFQP++V EP
Sbjct: 295 TIVGAGSADGALGASDMLKPMLARGELQTIGATTTDEYRKYIEKDAALERRFQPIQVHEP 354
Query: 205 SVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRV 264
S+ ETI+ILKGLR RYE HH + TD AL +AA+LS +YI DR LPDKAIDLIDEAG+R+
Sbjct: 355 SIAETIEILKGLRSRYENHHHVTITDGALQAAAELSSRYIQDRHLPDKAIDLIDEAGARL 414
Query: 265 RLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKE 324
R+R P E +EL+ ++ ++ +EK+++++ QDFEKA ELRD++ L+A+ K KE
Sbjct: 415 RIRRLTAPPELKELDTKIAKLAEEKDQSIKDQDFEKAAELRDKQEKLEAE-----RKQKE 469
Query: 325 MSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEA 384
S E E+ DV VV E I ++S TGIPV K++ ES +L+ ME LHKR+IGQDEA
Sbjct: 470 SSWREGES-DVKMVVDEDVIAEVISQTTGIPVFKLTQAESKKLMTMESELHKRIIGQDEA 528
Query: 385 VKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSE 444
V A+SR+IRRARVGLK+P RP SFIF+GPTGVGK+ELAK LA + F E+A+IR+DMSE
Sbjct: 529 VSALSRSIRRARVGLKDPKRPSGSFIFAGPTGVGKTELAKTLAEFLFDDEDALIRVDMSE 588
Query: 445 FMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILED 504
F E++ S+L G+PPGYVGY EGG+LTE VRR+P++VVLFDEIEKAHPD+FN +LQ+L+D
Sbjct: 589 FSEKYAASRLFGAPPGYVGYEEGGELTEKVRRKPFSVVLFDEIEKAHPDIFNTLLQVLDD 648
Query: 505 GRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEEL 564
G LTD +GR VDFKNT++I+T+N+G+ I K GF+L + +SSY R+K V+ EL
Sbjct: 649 GHLTDGQGRKVDFKNTIIILTTNLGTRDIAKAA-NTGFNLGAN-TESSYQRMKDQVSAEL 706
Query: 565 KQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVE 624
KQ FRPEFLNRLD++IVF+QLT+ +V++I D+ +K++ DRL + + L++T+ ++ + +
Sbjct: 707 KQQFRPEFLNRLDDIIVFKQLTEPQVRQIVDLDVKQLNDRLFDRHMSLELTDAAKDLLAQ 766
Query: 625 EGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDG 671
+G++P GARPLRR I R +ED+++EK+L E+++G V VD + +G
Sbjct: 767 KGFDPLLGARPLRRVIQRDVEDAISEKILMGELEDGQRVKVDAEGEG 813
>gi|229816837|ref|ZP_04447119.1| hypothetical protein BIFANG_02085 [Bifidobacterium angulatum DSM
20098 = JCM 7096]
gi|229785853|gb|EEP21967.1| hypothetical protein BIFANG_02085 [Bifidobacterium angulatum DSM
20098 = JCM 7096]
Length = 881
Score = 768 bits (1982), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 376/664 (56%), Positives = 516/664 (77%), Gaps = 8/664 (1%)
Query: 8 AVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPC 67
A GV ++ + L+++G NLT A GKLDPV+GR +IERV+ +L RRTKNNP
Sbjct: 155 ANAGGVADKTNKSGSAILDQFGRNLTAEAAAGKLDPVIGRTQEIERVMVVLSRRTKNNPV 214
Query: 68 LIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLM 127
LIGEPGVGKTA+ EGLA++I +GDVP+T++GK+V +LD+G +VAG++YRG+FEERLKK++
Sbjct: 215 LIGEPGVGKTAVVEGLAEKINAGDVPETLKGKQVYSLDLGSMVAGSRYRGDFEERLKKVL 274
Query: 128 EEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIE 187
+EIK +I+LFIDE+HT++GAG+A+GA+ A+++LKP LARGELQ IGATT DEYRK+IE
Sbjct: 275 KEIKTRGDIVLFIDEIHTIVGAGSADGALGASDMLKPMLARGELQTIGATTTDEYRKYIE 334
Query: 188 KDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDR 247
KD ALERRFQP++V EP++ ETI+ILKGLRERYE HH++ TD A+ +AA+LS +YI DR
Sbjct: 335 KDAALERRFQPIQVHEPTIAETIEILKGLRERYENHHRVTITDSAIQAAAELSSRYIQDR 394
Query: 248 FLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDR 307
LPDKAIDLIDEAG+R+R++ +P E +ELE ++ +++ EK +AV+ QDFEKA ++RD
Sbjct: 395 RLPDKAIDLIDEAGARLRIKRLTMPPELKELEAKVAKLSAEKEQAVKDQDFEKAADMRD- 453
Query: 308 EMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRL 367
DL+ + L D+ K + ET D VV E I +VS+ TGIPV K++ ES +L
Sbjct: 454 --DLEKLQTELKDRQKAWHEGET---DAKMVVDEDVIAEVVSSTTGIPVVKLTQAESKKL 508
Query: 368 LKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALA 427
L ME LHKR+IGQDEAV A++R+IRR RVGLK+P RP SFIF+GPTGVGK+ELAK LA
Sbjct: 509 LNMEAELHKRIIGQDEAVSALARSIRRTRVGLKDPKRPAGSFIFAGPTGVGKTELAKTLA 568
Query: 428 AYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEI 487
+ F E+A+IR+DMSEF E++ S+L G+PPGY+GY EGG+LTE VRR+P++VVLFDEI
Sbjct: 569 EFLFDDEDALIRVDMSEFSEKYAASRLFGAPPGYIGYEEGGELTEKVRRKPFSVVLFDEI 628
Query: 488 EKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYD 547
EKAHPD+FN +LQ+L+DG LTD +GR VDFKNT++I+T+N+G+ I K GF+L +
Sbjct: 629 EKAHPDIFNSLLQVLDDGHLTDGQGRKVDFKNTIIILTTNLGTRDIAKAA-NTGFNLGTN 687
Query: 548 EKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKT 607
+SSY R+K V+ ELKQ FRPEFLNRLD++IVF+QLTK EV++I D+ +K++ DRL
Sbjct: 688 -TESSYQRMKEQVSSELKQQFRPEFLNRLDDIIVFKQLTKPEVRQIVDLDVKKLDDRLFD 746
Query: 608 KDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDV 667
+ + L +T+ ++ + ++G++P GARPLRR I R +ED+++EK+L E+ +G+ V VD
Sbjct: 747 RHMSLDLTDEAKDLLAQKGFDPLLGARPLRRVIQRDIEDAISEKILMGELTDGEHVKVDA 806
Query: 668 DSDG 671
+ +G
Sbjct: 807 EGEG 810
>gi|293191197|ref|ZP_06609130.1| negative regulator of genetic competence ClpC/MecB [Actinomyces
odontolyticus F0309]
gi|292820618|gb|EFF79587.1| negative regulator of genetic competence ClpC/MecB [Actinomyces
odontolyticus F0309]
Length = 826
Score = 768 bits (1982), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/647 (59%), Positives = 508/647 (78%), Gaps = 8/647 (1%)
Query: 25 LEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLA 84
LE++G NLT+ A E KLDPV+GR+ ++ERV+Q+L RRTKNNP LIGEPGVGKTA+ EGLA
Sbjct: 178 LEQFGRNLTQAARENKLDPVIGRRVEMERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLA 237
Query: 85 QRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVH 144
Q I GDVP+TI+ K++ +LDMG LVAG++YRG+FEERLKK+++EI+ +IILFIDE+H
Sbjct: 238 QAIVHGDVPETIKDKQIYSLDMGSLVAGSRYRGDFEERLKKVLKEIRTRGDIILFIDEIH 297
Query: 145 TLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEP 204
TL+GAGAAEG+IDAA +LKP LARGELQ IGATT DEYRK+IEKD ALERRFQPVKV EP
Sbjct: 298 TLVGAGAAEGSIDAAQMLKPMLARGELQTIGATTNDEYRKYIEKDAALERRFQPVKVEEP 357
Query: 205 SVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRV 264
SVDET++ILKGLR+RYE HH++ TD A+ +AA+L+ +YISDRFLPDKAIDL+DEAG+R+
Sbjct: 358 SVDETVEILKGLRDRYEAHHRVIITDAAIQAAAELADRYISDRFLPDKAIDLVDEAGARL 417
Query: 265 RLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKE 324
R+R P E RE+++++ ++ + K A+ QDFEKA LRD E L + K KE
Sbjct: 418 RIRRMTAPPELREIDEKIAEVRRNKEAAIDDQDFEKAASLRDEESKLNEE-----RKAKE 472
Query: 325 MSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEA 384
+ E+ ++ V + +I +++ TGIPV +++ E+ +LLKME+ LHKRVIGQDEA
Sbjct: 473 EAWKGGESDEIAE-VGDQEIAEVLAMSTGIPVVRLTQTETAKLLKMEDELHKRVIGQDEA 531
Query: 385 VKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSE 444
VKA++++IRR R GLK+PNRP SFIF+GPTGVGK+ELAKALA + FG E+A+I+LDMSE
Sbjct: 532 VKALAQSIRRTRSGLKDPNRPGGSFIFAGPTGVGKTELAKALAEFLFGDEDALIQLDMSE 591
Query: 445 FMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILED 504
F E+HT S+L G+PPGYVGY EGGQLTE VRR+P++VVLFDE+EKAHPD+FN +LQILE+
Sbjct: 592 FSEKHTASRLFGAPPGYVGYDEGGQLTEKVRRKPFSVVLFDEVEKAHPDIFNSLLQILEE 651
Query: 505 GRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEEL 564
GRLTDS+GR VDFKNT++IMT+N+G+ I K G GF D Y R+KS V EEL
Sbjct: 652 GRLTDSQGRKVDFKNTVIIMTTNLGTRDINK-GVLTGFQT-ADNSTHDYGRMKSKVAEEL 709
Query: 565 KQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVE 624
KQ+FRPEFLNR+D+ IVF LTK E+ I D+M+ ++ R++ +D+ LQ+T+ RE + +
Sbjct: 710 KQHFRPEFLNRVDDTIVFPPLTKPEISRIVDLMIAKLAKRMEAQDMRLQLTDDARELLAD 769
Query: 625 EGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDG 671
G++P GARPLRRAI R +ED+++E++L E++ G V V V +G
Sbjct: 770 VGFDPVLGARPLRRAIQREIEDALSERILFGELQPGQVVTVGVTGEG 816
>gi|315605228|ref|ZP_07880274.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Actinomyces
sp. oral taxon 180 str. F0310]
gi|315313045|gb|EFU61116.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Actinomyces
sp. oral taxon 180 str. F0310]
Length = 826
Score = 768 bits (1982), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/647 (59%), Positives = 509/647 (78%), Gaps = 8/647 (1%)
Query: 25 LEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLA 84
LE++G NLT+ A E KLDPV+GR+ ++ERV+Q+L RRTKNNP LIGEPGVGKTA+ EGLA
Sbjct: 178 LEQFGRNLTQAARENKLDPVIGRRTEMERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLA 237
Query: 85 QRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVH 144
Q I +GDVP+TI+ +++ +LDMG LVAG++YRG+FEERLKK+++EI+ +IILFIDE+H
Sbjct: 238 QAIVAGDVPETIKDRQIYSLDMGSLVAGSRYRGDFEERLKKVLKEIRTRGDIILFIDEIH 297
Query: 145 TLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEP 204
TL+GAGAAEG+IDAA +LKP LARGELQ IGATT DEYRK+IEKD ALERRFQPVKV EP
Sbjct: 298 TLVGAGAAEGSIDAAQMLKPMLARGELQTIGATTNDEYRKYIEKDAALERRFQPVKVDEP 357
Query: 205 SVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRV 264
SVDET++ILKGLR+RYE HH++ TD A+ +AA+L+ +YISDRFLPDKAIDL+DEAG+R+
Sbjct: 358 SVDETVEILKGLRDRYEAHHRVIITDAAIQAAAELADRYISDRFLPDKAIDLVDEAGARL 417
Query: 265 RLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKE 324
R+R P E REL++++ ++ + K A+ QDFEKA LRD E L + K KE
Sbjct: 418 RIRRMTAPPELRELDEKIAEVRRNKEAAIDDQDFEKAASLRDEESKLAEE-----RKSKE 472
Query: 325 MSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEA 384
+ E+ ++ V + +I +++ TGIPV +++ E+ +LLKME+ LHKRVIGQDEA
Sbjct: 473 EAWKGGESDEIAE-VGDQEIAEVLAMSTGIPVVRLTQTETAKLLKMEDELHKRVIGQDEA 531
Query: 385 VKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSE 444
VKA++++IRR R GLK+PNRP SFIF+GPTGVGK+ELAKALA + FG E+A+I+LDMSE
Sbjct: 532 VKALAQSIRRTRSGLKDPNRPGGSFIFAGPTGVGKTELAKALAEFLFGDEDALIQLDMSE 591
Query: 445 FMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILED 504
F E+HT S+L G+PPGYVGY EGGQLTE VRR+P++VVLFDE+EKAHPD+FN +LQILE+
Sbjct: 592 FSEKHTASRLFGAPPGYVGYDEGGQLTEKVRRKPFSVVLFDEVEKAHPDIFNSLLQILEE 651
Query: 505 GRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEEL 564
GRLTDS+GR VDFKNT++IMT+N+G+ I K G GF D Y R+K+ V EEL
Sbjct: 652 GRLTDSQGRKVDFKNTVIIMTTNLGTRDINK-GVLTGFQT-ADHSTHDYGRMKAKVAEEL 709
Query: 565 KQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVE 624
KQ+FRPEFLNR+D+ IVF LTK E+ I D+M+ ++ R++ +D+ LQ+T+ RE + +
Sbjct: 710 KQHFRPEFLNRVDDTIVFPPLTKPEIARIVDLMIAKLAKRMEAQDMRLQLTDEARELLAD 769
Query: 625 EGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDG 671
G++P GARPLRRAI R +ED+++E++L E++ G V V V +G
Sbjct: 770 VGFDPVLGARPLRRAIQREIEDALSERILFGELQPGQVVTVGVQEEG 816
>gi|396583892|ref|ZP_10484401.1| Clp amino terminal domain protein [Actinomyces sp. ICM47]
gi|395548567|gb|EJG15807.1| Clp amino terminal domain protein [Actinomyces sp. ICM47]
Length = 822
Score = 768 bits (1982), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/648 (59%), Positives = 509/648 (78%), Gaps = 8/648 (1%)
Query: 25 LEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLA 84
LE++G NLT+ A E KLDPV+GR+ ++ERV+Q+L RRTKNNP LIGEPGVGKTA+ EGLA
Sbjct: 174 LEQFGRNLTQAARENKLDPVIGRRVEMERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLA 233
Query: 85 QRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVH 144
Q I GDVP+TI+ K++ +LDMG LVAG++YRG+FEERLKK+++EI+ +IILFIDE+H
Sbjct: 234 QAIVHGDVPETIKDKQIYSLDMGSLVAGSRYRGDFEERLKKVLKEIRTRGDIILFIDEIH 293
Query: 145 TLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEP 204
TL+GAGAAEG+IDAA +LKP LARGELQ IGATT DEYRK+IEKD ALERRFQPVKV EP
Sbjct: 294 TLVGAGAAEGSIDAAQMLKPMLARGELQTIGATTNDEYRKYIEKDAALERRFQPVKVEEP 353
Query: 205 SVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRV 264
SV+ET++ILKGLR+RYE HH++ TD A+ +AA+L+ +YISDRFLPDKAIDL+DEAG+R+
Sbjct: 354 SVEETVEILKGLRDRYEAHHRVIITDAAIQAAAELADRYISDRFLPDKAIDLVDEAGARL 413
Query: 265 RLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKE 324
R+R P E REL++++ ++ + K A+ QDFEKA LRD+E L + K KE
Sbjct: 414 RIRRMTAPPELRELDEKIAEVRRNKEAAIDDQDFEKAASLRDQESKLSEE-----RKAKE 468
Query: 325 MSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEA 384
+ E+ ++ V + +I +++ TGIPV +++ E+ +LLKME+ LHKRVIGQDEA
Sbjct: 469 EAWKGGESDEIAE-VGDQEIAEVLAMSTGIPVVRLTQTETAKLLKMEDELHKRVIGQDEA 527
Query: 385 VKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSE 444
VKA++++IRR R GLK+PNRP SFIF+GPTGVGK+ELAKALA + FG E+A+I+LDMSE
Sbjct: 528 VKALAQSIRRTRSGLKDPNRPGGSFIFAGPTGVGKTELAKALAEFLFGDEDALIQLDMSE 587
Query: 445 FMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILED 504
F E+HT S+L G+PPGYVGY EGGQLTE VRR+P++VVLFDE+EKAHPD+FN +LQILE+
Sbjct: 588 FSEKHTASRLFGAPPGYVGYDEGGQLTEKVRRKPFSVVLFDEVEKAHPDIFNSLLQILEE 647
Query: 505 GRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEEL 564
GRLTDS+GR VDFKNT++IMT+N+G+ I K G GF D Y R+KS V EEL
Sbjct: 648 GRLTDSQGRKVDFKNTVIIMTTNLGTRDINK-GVLTGFQT-ADHSTHDYGRMKSKVAEEL 705
Query: 565 KQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVE 624
KQ+FRPEFLNR+D+ IVF LTK E+ I D+M+ ++ R++ +D+ LQ+T+ RE + +
Sbjct: 706 KQHFRPEFLNRVDDTIVFPPLTKPEIARIVDLMIAKLAKRMEAQDMRLQLTDEARELLAD 765
Query: 625 EGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGN 672
G++P GARPLRRAI R +ED+++E++L E++ G V V V +G
Sbjct: 766 VGFDPVLGARPLRRAIQREIEDALSERILFGELQPGQVVTVGVTGEGK 813
>gi|54022379|ref|YP_116621.1| Clp protease [Nocardia farcinica IFM 10152]
gi|54013887|dbj|BAD55257.1| putative Clp protease [Nocardia farcinica IFM 10152]
Length = 851
Score = 768 bits (1982), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/647 (58%), Positives = 505/647 (78%), Gaps = 14/647 (2%)
Query: 25 LEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLA 84
L+++G NLT+ A EGKLDPV+GR +IERV+Q+L RRTKNNP LIGEPGVGKTA+ EGLA
Sbjct: 168 LDQFGRNLTQAALEGKLDPVIGRSKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLA 227
Query: 85 QRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVH 144
Q I +G+VP+T++ K++ TLD+G LVAG++YRG+FEERLKK+++EI +IILFIDE+H
Sbjct: 228 QAIVNGEVPETLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDELH 287
Query: 145 TLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEP 204
TL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEYRK+IEKD ALERRFQPV+V EP
Sbjct: 288 TLVGAGAAEGAIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEP 347
Query: 205 SVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRV 264
+V+ TI ILKGLR+RYE HH++ TD ALV+AA L+ +YI+DRFLPDKAIDLIDEAG+R+
Sbjct: 348 TVEHTINILKGLRDRYEAHHRVSITDGALVAAATLADRYINDRFLPDKAIDLIDEAGARM 407
Query: 265 RLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKE 324
R+R P + RE + ++ +EK A+ QDFEKA LRD+E LV K E
Sbjct: 408 RIRRMTAPPDLREFDDKIADARREKESAIDAQDFEKAARLRDKE-------KQLVAKRAE 460
Query: 325 MSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQ 381
K + +GD+ VV EVD I +++ WTGIPV K++ +E+ RLL+ME+ LHKR+IGQ
Sbjct: 461 REK-QWRSGDL-DVVAEVDDEQIAEVLANWTGIPVFKLTEEETTRLLRMEDELHKRIIGQ 518
Query: 382 DEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLD 441
++AVKA+S+AIRR R GLK+P RP SFIF+GP+GVGK+EL+KALA + FG ++A+I++D
Sbjct: 519 EDAVKAVSKAIRRTRAGLKDPKRPSGSFIFAGPSGVGKTELSKALANFLFGDDDALIQID 578
Query: 442 MSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQI 501
M EF +R T S+L G+PPGYVGY EGGQLTE VRR+P++VVLFDEIEKAH +++N +LQ+
Sbjct: 579 MGEFHDRFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNTLLQV 638
Query: 502 LEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVT 561
LEDGRLTD +GRTVDFKNT+LI TSN+G+ I K +GF +E S+Y R+K V
Sbjct: 639 LEDGRLTDGQGRTVDFKNTVLIFTSNLGTQDISK-AVGLGFSQSNNE-GSNYERMKLKVN 696
Query: 562 EELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRER 621
+ELK++FRPEFLNR+D++IVF QLT ++ E+ D+M+ V +LK KD+ +++T +
Sbjct: 697 DELKKHFRPEFLNRIDDVIVFHQLTNEQIVEMVDLMIGRVATQLKNKDMAIELTPTAKNL 756
Query: 622 VVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVD 668
+ + G++P GARPLRR I R +ED ++EK+L EI G +++VDV+
Sbjct: 757 LAKRGFDPVLGARPLRRTIQREIEDQLSEKILFGEIGPGQTILVDVE 803
>gi|365873228|ref|ZP_09412761.1| ATPase with chaperone activity, ATP-binding subunit
[Thermanaerovibrio velox DSM 12556]
gi|363983315|gb|EHM09522.1| ATPase with chaperone activity, ATP-binding subunit
[Thermanaerovibrio velox DSM 12556]
Length = 817
Score = 767 bits (1981), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/645 (59%), Positives = 512/645 (79%), Gaps = 9/645 (1%)
Query: 20 NKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAI 79
+K PTL++ G +L++LA G+LDPV+GR +I+R+VQ+L RRTKNNP LIG+PGVGKTAI
Sbjct: 167 SKTPTLDQLGVDLSELARNGELDPVIGRGKEIQRLVQVLSRRTKNNPVLIGDPGVGKTAI 226
Query: 80 AEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILF 139
EGLAQR+ SGD+P+ ++GK+V+ L++G LVAGTKYRGEFEER++KL++EIK+S +ILF
Sbjct: 227 VEGLAQRVVSGDIPEVLKGKRVVQLNVGNLVAGTKYRGEFEERMRKLVKEIKESKNVILF 286
Query: 140 IDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPV 199
+DE+HTL+GAG AEGA+DAANILKPSLARGE Q IGATT++EYRK+IEKD ALERRFQP+
Sbjct: 287 VDEIHTLVGAGGAEGAVDAANILKPSLARGEFQVIGATTMEEYRKYIEKDAALERRFQPI 346
Query: 200 KVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDE 259
V EPS ++T+ IL+GLR+RYE HH+++ +DEALV+AA+LS +YI++R+LPDKAIDLIDE
Sbjct: 347 HVDEPSEEDTVLILEGLRDRYEAHHRVKISDEALVAAARLSKRYITERYLPDKAIDLIDE 406
Query: 260 AGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALV 319
A +R RL+ + PEE +E+EK L ++ KEK AV Q+FEKA LRD E L ++ V
Sbjct: 407 AAARSRLKTMEAPEELKEMEKRLEEVRKEKESAVMSQEFEKAATLRDEERRLYEEMEE-V 465
Query: 320 DKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVI 379
+ ++ + + E PVVT DI IVS WTG+PV +++ +E+ RLL+MEE +H+R++
Sbjct: 466 RRRWQVRRNQEE-----PVVTGEDIAVIVSEWTGVPVVQLTEEEAKRLLRMEEEIHRRLV 520
Query: 380 GQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIR 439
GQ+EAV A++RAIRRAR GLK+P RP+ SF+F GPTGVGK+ELA+ LA + FGS++AMIR
Sbjct: 521 GQEEAVSAVARAIRRARSGLKDPRRPVGSFLFLGPTGVGKTELARRLAWFLFGSDDAMIR 580
Query: 440 LDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMML 499
DMSEFMERH V+KLIG+PPGYVG+ EGG+LTEAVRRRPY+VVLFDEIEKAHPDVFN++L
Sbjct: 581 FDMSEFMERHEVAKLIGAPPGYVGHEEGGKLTEAVRRRPYSVVLFDEIEKAHPDVFNLLL 640
Query: 500 QILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDY-DEKDSSYNRIKS 558
Q+LEDGRLTD +G VDF+NT++IMTSNVG+S KG +GF DE ++R K
Sbjct: 641 QLLEDGRLTDGQGHVVDFRNTVVIMTSNVGASDASKG--HLGFSSGGDDEALEGWDRTKG 698
Query: 559 LVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERF 618
+ + +K+ FRPEFLNR+DEM+VFR L + E+ IA +ML EV R K I L V ++
Sbjct: 699 AIMDAVKRTFRPEFLNRVDEMVVFRPLRREELLGIARMMLDEVVARCAEKGIRLSVNDQV 758
Query: 619 RERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSV 663
++V+EEG++P +GARPLRR I +L+ED +A+ ML ++EG V
Sbjct: 759 VQKVLEEGFDPKFGARPLRRTIQKLVEDPLADMMLEGLLREGIHV 803
>gi|376291130|ref|YP_005163377.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
diphtheriae C7 (beta)]
gi|372104526|gb|AEX68123.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
diphtheriae C7 (beta)]
Length = 878
Score = 767 bits (1981), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/674 (56%), Positives = 515/674 (76%), Gaps = 17/674 (2%)
Query: 24 TLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGL 83
L+++G NLT+ A+EGKLDPVVGR+ +IER++Q+L RRTKNNP LIGEPGVGKTA+ EGL
Sbjct: 183 VLDQFGRNLTQAAKEGKLDPVVGREQEIERIMQVLSRRTKNNPVLIGEPGVGKTAVVEGL 242
Query: 84 AQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEV 143
A I +G VP+T++ K+V +LD+G LVAG++YRG+FEERLKK+++EI Q +IILFIDE+
Sbjct: 243 ALDIVNGKVPETLKDKQVYSLDLGSLVAGSRYRGDFEERLKKVLKEINQRGDIILFIDEI 302
Query: 144 HTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPE 203
HTL+GAGAAEGAIDAA++LKP LARGELQ IGATTLDEYRKHIEKD ALERRFQPV+VPE
Sbjct: 303 HTLVGAGAAEGAIDAASLLKPKLARGELQTIGATTLDEYRKHIEKDAALERRFQPVQVPE 362
Query: 204 PSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSR 263
PSVD TI+ILKGLR+RYE HH++ TD AL +AAQLS +YI+DRFLPDKA+DLIDEAG+R
Sbjct: 363 PSVDMTIEILKGLRDRYEAHHRVSITDGALAAAAQLSDRYINDRFLPDKAVDLIDEAGAR 422
Query: 264 VRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGK 323
+R++ PE R+++ ++ ++ +EK A+ QDFEKA LRD E L G+
Sbjct: 423 MRIKRMTAPESIRKVDDQIAEVRREKEAAIDAQDFEKAAGLRDTERKL----------GE 472
Query: 324 EMSKAETE--AGDVGPV--VTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVI 379
E ++ E + +G++ + V E I ++ WTGIPV K++ +ES RLL ME+ LHKR+I
Sbjct: 473 ERAEKEKQWRSGNLEDIAEVGEEQIAEVLGNWTGIPVFKLTEEESSRLLHMEDELHKRII 532
Query: 380 GQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIR 439
GQD+AVK++SRAIRR R GLK+P RP SFIF+GP+GVGK+EL+K+LA + FG ++A+I+
Sbjct: 533 GQDDAVKSVSRAIRRTRAGLKDPRRPSGSFIFAGPSGVGKTELSKSLANFLFGDDDALIQ 592
Query: 440 LDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMML 499
+DM EF +R T S+L G+PPGYVGY EGGQLTE VRR+P++VVLFDEIEKAH +++N +L
Sbjct: 593 IDMGEFHDRFTASRLFGAPPGYVGYDEGGQLTEKVRRKPFSVVLFDEIEKAHKEIYNTLL 652
Query: 500 QILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGF-DLDYDEKDSSYNRIKS 558
Q+LE+GRLTD +GR VDFKNT+LI TSN+G+ I K +GF + + D Y+R+K
Sbjct: 653 QVLEEGRLTDGQGRVVDFKNTVLIFTSNLGTQDISK-AVGMGFSSVGEHDADGQYDRMKQ 711
Query: 559 LVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERF 618
V +ELK++FRPEFLNR+DE++VF QLT+ ++ E+ D+++ V L KD+ +++TE+
Sbjct: 712 KVNDELKKHFRPEFLNRIDEIVVFHQLTQEQIVEMVDLLIGRVSKALAQKDMGIELTEKA 771
Query: 619 RERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDS-DGNVTVLN 677
+ + + G++P GARPLRR I R +ED ++EK+L E+ G+ V VDV+ DG +
Sbjct: 772 KNLLAKRGFDPVLGARPLRRTIQREIEDVLSEKILFGEVGAGEIVTVDVEGWDGESKETD 831
Query: 678 GSSGAPESLADPLP 691
+S PLP
Sbjct: 832 KASFTFTPRVKPLP 845
>gi|375293788|ref|YP_005128328.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
diphtheriae INCA 402]
gi|371583460|gb|AEX47126.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
diphtheriae INCA 402]
Length = 878
Score = 767 bits (1980), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/674 (56%), Positives = 514/674 (76%), Gaps = 17/674 (2%)
Query: 24 TLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGL 83
L+++G NLT+ A+EGKLDPVVGR+ +IER++Q+L RRTKNNP LIGEPGVGKTA+ EGL
Sbjct: 183 VLDQFGRNLTQAAKEGKLDPVVGREQEIERIMQVLSRRTKNNPVLIGEPGVGKTAVVEGL 242
Query: 84 AQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEV 143
A I +G VP+T++ K+V +LD+G LVAG++YRG+FEERLKK+++EI Q +IILFIDE+
Sbjct: 243 ALDIVNGKVPETLKDKQVYSLDLGSLVAGSRYRGDFEERLKKVLKEINQRGDIILFIDEI 302
Query: 144 HTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPE 203
HTL+GAGAAEGAIDAA++LKP LARGELQ IGATTLDEYRKHIEKD ALERRFQPV+VPE
Sbjct: 303 HTLVGAGAAEGAIDAASLLKPKLARGELQTIGATTLDEYRKHIEKDAALERRFQPVQVPE 362
Query: 204 PSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSR 263
PSVD TI+ILKGLR+RYE HH++ TD AL +AAQLS +YI+DRFLPDKA+DLIDEAG+R
Sbjct: 363 PSVDMTIEILKGLRDRYEAHHRVSITDGALAAAAQLSDRYINDRFLPDKAVDLIDEAGAR 422
Query: 264 VRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGK 323
+R++ PE R+++ ++ ++ +EK A+ QDFEKA LRD E L G+
Sbjct: 423 MRIKRMTAPESIRKVDDQIAEVRREKEAAIDAQDFEKAAGLRDTERKL----------GE 472
Query: 324 EMSKAETE--AGDVGPV--VTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVI 379
E ++ E + +GD+ + V E I ++ WTGIPV K++ +ES RLL MEE LH+R+I
Sbjct: 473 ERAEKEKQWRSGDLEDIAEVGEEQIAEVLGNWTGIPVFKLTEEESSRLLHMEEELHRRII 532
Query: 380 GQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIR 439
GQD+AVK++SRAIRR R GLK+P RP SFIF+GP+GVGK+EL+K+LA + FG ++A+I+
Sbjct: 533 GQDDAVKSVSRAIRRTRAGLKDPRRPSGSFIFAGPSGVGKTELSKSLANFLFGDDDALIQ 592
Query: 440 LDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMML 499
+DM EF +R T S+L G+PPGYVGY EGGQLTE VRR+P++VVLFDEIEKAH +++N +L
Sbjct: 593 IDMGEFHDRFTASRLFGAPPGYVGYDEGGQLTEKVRRKPFSVVLFDEIEKAHKEIYNTLL 652
Query: 500 QILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGF-DLDYDEKDSSYNRIKS 558
Q+LE+GRLTD +GR VDFKNT+LI TSN+G+ I K +GF + + D Y+R+K
Sbjct: 653 QVLEEGRLTDGQGRVVDFKNTVLIFTSNLGTQDISK-AVGMGFSSVGEHDADGQYDRMKQ 711
Query: 559 LVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERF 618
V +ELK++FRPEFLNR+DE++VF QL + ++ E+ D+++ V L KD+ +++TE+
Sbjct: 712 KVNDELKKHFRPEFLNRIDEIVVFHQLAQEQIVEMVDLLIGRVSKALAQKDMGIELTEKA 771
Query: 619 RERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDS-DGNVTVLN 677
+ + + G++P GARPLRR I R +ED ++EK+L E+ G+ V VDV+ DG +
Sbjct: 772 KNLLAKRGFDPVLGARPLRRTIQREIEDVLSEKILFGEVGAGEIVTVDVEGWDGESKETD 831
Query: 678 GSSGAPESLADPLP 691
+S PLP
Sbjct: 832 KASFTFTPRVKPLP 845
>gi|376257826|ref|YP_005145717.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
diphtheriae VA01]
gi|372120343|gb|AEX84077.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
diphtheriae VA01]
Length = 878
Score = 767 bits (1980), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/674 (56%), Positives = 514/674 (76%), Gaps = 17/674 (2%)
Query: 24 TLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGL 83
L+++G NLT+ A+EGKLDPVVGR+ +IER++Q+L RRTKNNP LIGEPGVGKTA+ EGL
Sbjct: 183 VLDQFGRNLTQAAKEGKLDPVVGREQEIERIMQVLSRRTKNNPVLIGEPGVGKTAVVEGL 242
Query: 84 AQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEV 143
A I +G VP+T++ K+V +LD+G LVAG++YRG+FEERLKK+++EI Q +IILFIDE+
Sbjct: 243 ALDIVNGKVPETLKDKQVYSLDLGSLVAGSRYRGDFEERLKKVLKEINQRGDIILFIDEI 302
Query: 144 HTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPE 203
HTL+GAGAAEGAIDAA++LKP LARGELQ IGATTLDEYRKHIEKD ALERRFQPV+VPE
Sbjct: 303 HTLVGAGAAEGAIDAASLLKPKLARGELQTIGATTLDEYRKHIEKDAALERRFQPVQVPE 362
Query: 204 PSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSR 263
PSVD TI+ILKGLR+RYE HH++ TD AL +AAQLS +YI+DRFLPDKA+DLIDEAG+R
Sbjct: 363 PSVDMTIEILKGLRDRYEAHHRVSITDGALAAAAQLSDRYINDRFLPDKAVDLIDEAGAR 422
Query: 264 VRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGK 323
+ ++ PE R+++ ++ ++ +EK A+ QDFEKA LRD E L G+
Sbjct: 423 MCIKRMTAPESIRKVDDQIAEVRREKEAAIDAQDFEKAAGLRDTERKL----------GE 472
Query: 324 EMSKAETE--AGDVGPV--VTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVI 379
E ++ E + +GD+ + V E I ++ WTGIPV K++ +ES RLL MEE LHKR+I
Sbjct: 473 ERAEKEKQWRSGDLEDIAEVGEEQIAEVLGNWTGIPVFKLTEEESSRLLHMEEELHKRII 532
Query: 380 GQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIR 439
GQD+AVK++SRAIRR R GLK+P RP SFIF+GP+GVGK+EL+K+LA + FG ++A+I+
Sbjct: 533 GQDDAVKSVSRAIRRTRAGLKDPRRPSGSFIFAGPSGVGKTELSKSLANFLFGDDDALIQ 592
Query: 440 LDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMML 499
+DM EF +R T S+L G+PPGYVGY EGGQLTE VRR+P++VVLFDEIEKAH +++N +L
Sbjct: 593 IDMGEFHDRFTASRLFGAPPGYVGYDEGGQLTEKVRRKPFSVVLFDEIEKAHKEIYNTLL 652
Query: 500 QILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGF-DLDYDEKDSSYNRIKS 558
Q+LE+GRLTD +GR VDFKNT+LI TSN+G+ I K +GF + + D Y+R+K
Sbjct: 653 QVLEEGRLTDGQGRVVDFKNTVLIFTSNLGTQDISK-AVGMGFSSVGEHDADGQYDRMKQ 711
Query: 559 LVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERF 618
V +ELK++FRPEFLNR+DE++VF QLT+ ++ E+ D+++ V L KD+ +++TE+
Sbjct: 712 KVNDELKKHFRPEFLNRIDEIVVFHQLTQEQIVEMVDLLIGRVSKALAQKDMGIELTEKA 771
Query: 619 RERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDS-DGNVTVLN 677
+ + + G++P GARPLRR I R +ED ++EK+L E+ G+ V VDV+ DG +
Sbjct: 772 KNLLAKRGFDPVLGARPLRRTIQREIEDVLSEKILFGEVGAGEIVTVDVEGWDGESKETD 831
Query: 678 GSSGAPESLADPLP 691
+S PLP
Sbjct: 832 KASFTFTPRVKPLP 845
>gi|213965131|ref|ZP_03393329.1| ATPase family associated with various cellular activities (AAA)
protein [Corynebacterium amycolatum SK46]
gi|213952245|gb|EEB63629.1| ATPase family associated with various cellular activities (AAA)
protein [Corynebacterium amycolatum SK46]
Length = 910
Score = 766 bits (1979), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/660 (56%), Positives = 514/660 (77%), Gaps = 8/660 (1%)
Query: 10 GAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLI 69
GA V G+ + L+++G NLT A EGKLDPV+GR+ +IER++Q+L RRTKNNP LI
Sbjct: 164 GARVQEGNHQSGSLVLDQFGRNLTVAAREGKLDPVIGREKEIERIMQVLSRRTKNNPVLI 223
Query: 70 GEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEE 129
GEPGVGKTA+ EGLA I +G VP+T++ K++ +LD+G LVAG++YRG+FEERLKK+++E
Sbjct: 224 GEPGVGKTAVVEGLALDIVNGRVPETLKDKQLYSLDLGSLVAGSRYRGDFEERLKKVLKE 283
Query: 130 IKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKD 189
I Q +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEYRKHIEKD
Sbjct: 284 INQRGDIILFIDEIHTLVGAGAAEGAIDAASILKPKLARGELQTIGATTLDEYRKHIEKD 343
Query: 190 PALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFL 249
ALERRFQPV VPEPSVD TI+IL+G+R++YE HH++ +D+ALV+AA LS +YI+DRFL
Sbjct: 344 AALERRFQPVNVPEPSVDLTIEILRGVRDKYEAHHRVSISDKALVAAATLSDRYINDRFL 403
Query: 250 PDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREM 309
PDKA+DLIDEAG+R+R++ P + +E++ ++ + ++K A+ QDFEKA LRD+E
Sbjct: 404 PDKAVDLIDEAGARMRIKRMTAPADLQEIDSKIADVRRQKEAAIDEQDFEKAAGLRDKER 463
Query: 310 DLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLK 369
L + ++ K+ E+ D + E I ++++WTGIPV K++ +ES RLL+
Sbjct: 464 KLGEERR---EREKKWRAGES---DTIAEIGEEQIAEVLASWTGIPVFKLTEEESSRLLR 517
Query: 370 MEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAY 429
ME+ LHKR+IGQ+EAV A+SRAIRR R GLK+P RP SFIF+GP+GVGK+EL+KALA +
Sbjct: 518 MEDELHKRIIGQEEAVSAVSRAIRRTRAGLKDPKRPSGSFIFAGPSGVGKTELSKALAEF 577
Query: 430 YFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEK 489
FG E+A+I++DM EF +R T S+L G+PPGYVGY EGGQLTE VRR+P++VVLFDEIEK
Sbjct: 578 LFGEEDALIQIDMGEFHDRFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEK 637
Query: 490 AHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFD-LDYDE 548
AH +++N +LQ+LEDGRLTDS+GR VDFKNT+LI TSN+G+S I K +GF + +
Sbjct: 638 AHKEIYNTLLQVLEDGRLTDSQGRVVDFKNTVLIFTSNLGTSDISK-AVGMGFSGVGEAD 696
Query: 549 KDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTK 608
+D Y R+K V +ELK++FRPEFLNR+DE++VF+QL++ E+ ++ D+ML V D+L K
Sbjct: 697 EDGKYERMKDKVHDELKKHFRPEFLNRIDEIVVFKQLSQAEIVQMVDLMLTRVSDQLGEK 756
Query: 609 DIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVD 668
I +++++R + + + G++P GARPLRR I R +ED ++EK+L E+ G++V +DV+
Sbjct: 757 RITMEISDRAKNLLAKRGFDPVLGARPLRRTIQREIEDQLSEKILYGEVGLGETVFIDVE 816
>gi|332295188|ref|YP_004437111.1| ATPase AAA [Thermodesulfobium narugense DSM 14796]
gi|332178291|gb|AEE13980.1| ATPase AAA-2 domain protein [Thermodesulfobium narugense DSM 14796]
Length = 812
Score = 766 bits (1979), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 368/660 (55%), Positives = 504/660 (76%), Gaps = 11/660 (1%)
Query: 10 GAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLI 69
G V + P L E+G +LT LA E KLDPV+GR +I R++QI+ RRTKNNP LI
Sbjct: 144 GGSVIKSKESGRTPLLNEFGRDLTALAREKKLDPVIGRDKEIRRLIQIMCRRTKNNPVLI 203
Query: 70 GEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEE 129
G+PGVGKTAI EGLAQ I +VP + K++I+LD+GLL+AGTKYRGEFE+RLKK+ EE
Sbjct: 204 GDPGVGKTAIVEGLAQAIVDNNVPPMLRKKRLISLDLGLLIAGTKYRGEFEDRLKKITEE 263
Query: 130 IKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKD 189
IK + IILFIDE+HT++GAGAAEGA+DAANILKP+LARGE+QCIGATT+++YRKH+EKD
Sbjct: 264 IKNAGNIILFIDELHTIVGAGAAEGAVDAANILKPALARGEIQCIGATTVEDYRKHLEKD 323
Query: 190 PALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFL 249
LERRF P+ V EP+ +E IQIL GL+E+YE HH ++ T++A+ S+ +L+ +YISDRFL
Sbjct: 324 AGLERRFHPIHVEEPTQEEAIQILFGLKEKYEAHHGVKITEDAITSSVKLAKRYISDRFL 383
Query: 250 PDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREM 309
PDKAID++DEA ++V+L+ + E +EL K+L + +EK +R QDFEKA LRD E
Sbjct: 384 PDKAIDILDEASAKVKLKEPVMSEAWKELYKKLENVIEEKENVIRMQDFEKAAVLRDNEQ 443
Query: 310 DLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLK 369
++ +IS+ ++ +E++ E + VVTE DI +VS WTGI ++K++ E +LL
Sbjct: 444 KIRNEISSFTNQ-EEVNALEVK------VVTEEDIAEVVSEWTGIELKKLTESEMKKLLN 496
Query: 370 MEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAY 429
+EE LHKR++ Q EAV +I++ +RR R GL++P +P+ SF+F GPTGVGK+ELAK LA Y
Sbjct: 497 LEEALHKRIVSQHEAVVSIAKTLRRTRAGLQDPKKPLGSFLFLGPTGVGKTELAKTLAEY 556
Query: 430 YFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEK 489
FGSEE+++R DMSE+ME+HTVS+LIG+PPGYVGYTEGGQLT+AVRRRP +V+LFDEIEK
Sbjct: 557 LFGSEESLLRFDMSEYMEKHTVSRLIGAPPGYVGYTEGGQLTDAVRRRPSSVILFDEIEK 616
Query: 490 AHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEK 549
AHPDVFN++LQIL+DGRLTD KGRTV+FKNT+LIMTSN+G+ ++++G GF +
Sbjct: 617 AHPDVFNLLLQILDDGRLTDGKGRTVNFKNTILIMTSNLGTHMLKEGSP--GFLASSNSL 674
Query: 550 DSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKD 609
D Y ++KS + ELK FRPEFLNR+DE+I+F LT+ ++ I ML+ V ++LK
Sbjct: 675 D--YEKLKSQIQRELKDTFRPEFLNRIDEIIIFNSLTQEDMINITKKMLENVKEKLKVNL 732
Query: 610 IELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDS 669
I++ +E+ ++ +EGY+P +GARPL+R I + +ED +A+K++ IK+ DS+ VD DS
Sbjct: 733 IDITFSEKVVNQLAKEGYDPKFGARPLKRLIQKKIEDPIADKIIEGSIKQCDSIEVDFDS 792
>gi|347543096|ref|YP_004857734.1| negative regulator of genetic competence ClpC/mecB [Candidatus
Arthromitus sp. SFB-rat-Yit]
gi|346986133|dbj|BAK81808.1| negative regulator of genetic competence ClpC/mecB [Candidatus
Arthromitus sp. SFB-rat-Yit]
Length = 812
Score = 766 bits (1979), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 370/641 (57%), Positives = 503/641 (78%), Gaps = 7/641 (1%)
Query: 23 PTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEG 82
P L+++G +LTKLA EGKLDPV+GR + +RV++IL RR KNNPCLIG+PGVGKTAI EG
Sbjct: 164 PVLDQHGRDLTKLANEGKLDPVIGRDIETQRVLEILCRRIKNNPCLIGDPGVGKTAIIEG 223
Query: 83 LAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDE 142
LAQ+I G++P+ ++ K+V+TLD+ L+AGTKYRGEFEERLKK+MEEIK+S IILFIDE
Sbjct: 224 LAQKITEGNIPEILKNKRVVTLDLSSLIAGTKYRGEFEERLKKIMEEIKKSKNIILFIDE 283
Query: 143 VHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVP 202
+HT+IGAG AEGAIDA+NILKP+LARGE+QCIGATT+DEYRK+IEKD ALERRFQP+ V
Sbjct: 284 IHTIIGAGGAEGAIDASNILKPALARGEIQCIGATTIDEYRKYIEKDTALERRFQPIFVG 343
Query: 203 EPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGS 262
EP+ DETI IL G+R++YE HHK++ TDEA+ A LS ++I DR+LPDKAIDLIDEA +
Sbjct: 344 EPNEDETIDILMGIRDKYETHHKVKITDEAIRFAVSLSVRFIPDRYLPDKAIDLIDEAAA 403
Query: 263 RVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKG 322
++R+R+ +P E +E+E+E+ ++ KEK EA+ +DFEKA LRD+E LK ++ +
Sbjct: 404 KIRVRNLTVPIEVKEIEEEIAKVGKEKQEAITLEDFEKAASLRDKEQKLKERL----ENS 459
Query: 323 KEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQD 382
KE K + E D ++TE ++ +V++WT IPVEK++ ES++LLK+EE L RVI Q+
Sbjct: 460 KE--KWKVEKYDKEFILTEQELASVVASWTKIPVEKLTQTESEKLLKLEEMLKNRVIDQN 517
Query: 383 EAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDM 442
EAV ++++A++R RVG+K+P RPI SFIF GPTGVGK+EL KAL+ FGSEE +IR DM
Sbjct: 518 EAVTSVAKAVKRGRVGIKDPKRPIGSFIFLGPTGVGKTELCKALSDIVFGSEENIIRFDM 577
Query: 443 SEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQIL 502
SEFME+HTVSK+IGSPPGY+G+ EGGQLTE VRR PY+++LFDEIEKAHPD+FN+MLQIL
Sbjct: 578 SEFMEKHTVSKIIGSPPGYIGFQEGGQLTEKVRRSPYSIILFDEIEKAHPDIFNIMLQIL 637
Query: 503 EDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTE 562
EDG LTDS G+ V FKNT++I+TSN+G+ +I K +GF + ++ Y ++K+ V
Sbjct: 638 EDGHLTDSNGKRVSFKNTIIILTSNIGADIINKNS-SLGFINHKNNEEEIYTKMKNNVLS 696
Query: 563 ELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERV 622
ELK+ FRPEFLNRLD++IVF+ L K + +I D ML + R+ ++DI + +E + +
Sbjct: 697 ELKKNFRPEFLNRLDDVIVFKPLDKKSLTKILDKMLLDFNIRVSSQDISINFSEDVKNYI 756
Query: 623 VEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSV 663
++ + YGARPLRR+I + +ED++++++L IK GD+V
Sbjct: 757 LDNSLSEKYGARPLRRSITKYIEDTLSDQILLGNIKSGDNV 797
>gi|226363749|ref|YP_002781531.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Rhodococcus
opacus B4]
gi|226242238|dbj|BAH52586.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Rhodococcus
opacus B4]
Length = 845
Score = 766 bits (1979), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/649 (58%), Positives = 505/649 (77%), Gaps = 16/649 (2%)
Query: 25 LEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLA 84
L+++G NLT+ A EGKLDPV+GR +IERV+Q+L RRTKNNP LIGEPGVGKTA+ EGLA
Sbjct: 169 LDQFGRNLTQAALEGKLDPVIGRSKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLA 228
Query: 85 QRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVH 144
Q I +G+VP+T++ K++ TLD+G LVAG++YRG+FEERLKK+++EI +IILFIDE+H
Sbjct: 229 QAIVNGEVPETLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDELH 288
Query: 145 TLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEP 204
TL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEYRK+IEKD ALERRFQPV+V EP
Sbjct: 289 TLVGAGAAEGAIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEP 348
Query: 205 SVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRV 264
+V+ TI+ILKGLR+RYE HH++ TD ALV+AA L+ +YI+DRFLPDKAIDLIDEAG+R+
Sbjct: 349 TVEHTIEILKGLRDRYEAHHRVSITDGALVAAATLADRYINDRFLPDKAIDLIDEAGARM 408
Query: 265 RLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKE 324
R+R P + RE + ++ +EK A+ QDFEKA LRD+E L AQ +
Sbjct: 409 RIRRMTAPPDLREFDDKIADARREKESAIDAQDFEKAANLRDKEKTLVAQ--------RA 460
Query: 325 MSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQ 381
+ + +GD+ V+ EVD I ++ WTGIPV K++ +E+ RLL+MEE LHKR+IGQ
Sbjct: 461 EREKQWRSGDL-DVIAEVDDEQIAEVLGNWTGIPVFKLTEEETTRLLRMEEELHKRIIGQ 519
Query: 382 DEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLD 441
++AVKA+++AIRR R GLK+P RP SFIF+GP+GVGK+ELAK+LA + FG ++A+I++D
Sbjct: 520 EDAVKAVAKAIRRTRAGLKDPKRPSGSFIFAGPSGVGKTELAKSLANFLFGEDDALIQID 579
Query: 442 MSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQI 501
M EF +R T S+L G+PPGYVGY EGGQLTE VRR+P++VVLFDEIEKAH +++N +LQ+
Sbjct: 580 MGEFHDRFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNTLLQV 639
Query: 502 LEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKD-SSYNRIKSLV 560
LEDGRLTD +GRTVDFKNT+LI TSN+G+S I K +G + D S+Y R+K V
Sbjct: 640 LEDGRLTDGQGRTVDFKNTVLIFTSNLGTSDISKA---VGLGFTSGKGDESNYERMKLKV 696
Query: 561 TEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRE 620
+ELK++FRPEFLNR+D+++VF QLT ++ ++ D+M+ V LK KD+ ++V+E+ +
Sbjct: 697 HDELKKHFRPEFLNRIDDIVVFHQLTTEQIVQMVDLMVARVEVALKNKDMTMEVSEKAKA 756
Query: 621 RVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDS 669
+ + G++P GARPLRR I R +ED ++EK+L E+ G V VDVD+
Sbjct: 757 LLAKRGFDPVLGARPLRRTIQREIEDQLSEKILFGEVGPGQIVYVDVDN 805
>gi|182420087|ref|ZP_02951321.1| negative regulator of genetic competence ClpC/mecB [Clostridium
butyricum 5521]
gi|237666342|ref|ZP_04526327.1| putative negative regulator of genetic competence MecB/ClpC
[Clostridium butyricum E4 str. BoNT E BL5262]
gi|182376124|gb|EDT73711.1| negative regulator of genetic competence ClpC/mecB [Clostridium
butyricum 5521]
gi|237657541|gb|EEP55096.1| putative negative regulator of genetic competence MecB/ClpC
[Clostridium butyricum E4 str. BoNT E BL5262]
Length = 814
Score = 766 bits (1978), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 371/645 (57%), Positives = 508/645 (78%), Gaps = 8/645 (1%)
Query: 21 KMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIA 80
K P L++YG +LT+LA+EG LDPV+GR + +RV++IL RR KNNPCLIGEPGVGKTA+
Sbjct: 165 KTPMLDKYGRDLTQLAQEGALDPVIGRDIENQRVLEILCRRIKNNPCLIGEPGVGKTAVI 224
Query: 81 EGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFI 140
EGLAQRI G+VP+ ++ K+VI+LD+ ++AG KYRGEFEERLKK M+EI++ +I+FI
Sbjct: 225 EGLAQRIIDGNVPEILKNKRVISLDLTSMIAGAKYRGEFEERLKKTMDEIRKDKSVIIFI 284
Query: 141 DEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVK 200
DE+HT+IGAG AEGAIDA+NILKP+LARGE+QCIGATT+DEYRK+IEKD ALERRFQPV
Sbjct: 285 DEIHTIIGAGGAEGAIDASNILKPALARGEIQCIGATTIDEYRKYIEKDSALERRFQPVT 344
Query: 201 VPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEA 260
V EPS ++T++ILKGLR++YE HH+++ TDEALV+A LS +YI+DRF+PDKAIDLIDE
Sbjct: 345 VEEPSKEDTLEILKGLRDKYEAHHRVKITDEALVAAVNLSDRYITDRFMPDKAIDLIDEG 404
Query: 261 GSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVD 320
++VR+ P E +E+E+ + I KEK +A+ QDFEKA LRD E +LK + L +
Sbjct: 405 AAKVRIESLTEPPELKEIEERIALIDKEKEDAIMIQDFEKAANLRDNEKELKTE---LEN 461
Query: 321 KGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIG 380
K KE + ++ +V + I ++VS WT IP+EK++ ES++LL +E+ LHKRVIG
Sbjct: 462 KKKEWN---AQSSSKLLIVDKEKIANVVSVWTNIPIEKLTESESEKLLHLEDILHKRVIG 518
Query: 381 QDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRL 440
Q+EAVK+I+RA+RRARVG+K+PNRPI SFIF GPTGVGK+EL+KALA FG E ++IR+
Sbjct: 519 QNEAVKSIARAVRRARVGIKDPNRPIGSFIFLGPTGVGKTELSKALAEAMFGDENSIIRV 578
Query: 441 DMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQ 500
DMSE+ME H+V+KLIG+PPGY+G+ +GGQLTEAVRR+PY++VL DEIEKAH D+FN++LQ
Sbjct: 579 DMSEYMESHSVAKLIGAPPGYIGHEDGGQLTEAVRRKPYSIVLLDEIEKAHQDIFNILLQ 638
Query: 501 ILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLV 560
I+EDGRLTD KG+ V+FKNT++IMTSNVG+ I+K + IGF+ +E +S Y ++K +
Sbjct: 639 IMEDGRLTDGKGKVVNFKNTIIIMTSNVGAHQIKK-QKTIGFNSAQNE-ESDYEKMKENI 696
Query: 561 TEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRE 620
ELK+ F+PEFLNR+D+ IVF +L ++ +I D+MLK + DRL+ ++I L + +E
Sbjct: 697 LGELKKQFKPEFLNRIDDTIVFHKLNDQDLDKIMDLMLKSIKDRLEHREIYLNFEDNSKE 756
Query: 621 RVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIV 665
++ +G + GARPLRR +++ +ED ++E++L I+ GD V V
Sbjct: 757 FLLNKGIDLENGARPLRRILIKEVEDRLSEEILQGNIQIGDKVKV 801
>gi|384190952|ref|YP_005576700.1| Negative regulator of genetic competence clpC/mecB [Bifidobacterium
animalis subsp. lactis BB-12]
gi|384192096|ref|YP_005577843.1| Negative regulator of genetic competence clpC/mecB [Bifidobacterium
animalis subsp. lactis CNCM I-2494]
gi|289178444|gb|ADC85690.1| Negative regulator of genetic competence clpC/mecB [Bifidobacterium
animalis subsp. lactis BB-12]
gi|340364833|gb|AEK30124.1| Negative regulator of genetic competence clpC/mecB [Bifidobacterium
animalis subsp. lactis CNCM I-2494]
Length = 862
Score = 766 bits (1978), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/647 (58%), Positives = 510/647 (78%), Gaps = 8/647 (1%)
Query: 25 LEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLA 84
L+++G NLT A++GKLDPV+GR +IERV+ +L RRTKNNP LIGEPGVGKTA+ EGLA
Sbjct: 186 LDQFGRNLTAEAKDGKLDPVIGRSTEIERVMVVLSRRTKNNPVLIGEPGVGKTAVVEGLA 245
Query: 85 QRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVH 144
Q+I +GDVP+T++ K+V +LD+G +VAG++YRG+FEERLKK+++EIK +I+LFIDE+H
Sbjct: 246 QKIVAGDVPETLKDKQVYSLDLGSMVAGSRYRGDFEERLKKVLKEIKTRGDIVLFIDEIH 305
Query: 145 TLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEP 204
T++GAG+A+GA+ A+++LKP LARGELQ IGATT DEYRK+IEKD ALERRFQP++V EP
Sbjct: 306 TIVGAGSADGALGASDMLKPMLARGELQTIGATTTDEYRKYIEKDAALERRFQPIQVSEP 365
Query: 205 SVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRV 264
S+ ETI+ILKGLR RYE HH + TD AL SAA+LS +YI DR LPDKAIDLIDEAG+R+
Sbjct: 366 SIAETIEILKGLRARYENHHHVTITDGALQSAAELSARYIQDRNLPDKAIDLIDEAGARL 425
Query: 265 RLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKE 324
R++ P E +EL+ + +I KEK++ ++ Q FEKA ELRD++ L+A+ K KE
Sbjct: 426 RIKRLTAPPELKELDNRIARIAKEKDQTIKDQQFEKAAELRDKQEKLEAE-----RKEKE 480
Query: 325 MSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEA 384
S E E+ DV VV E I ++S TGIPV K++ ES +L+ ME+ LHKR+IGQDEA
Sbjct: 481 KSWREGES-DVRMVVDEDVIAEVISQSTGIPVFKLTQAESKKLMSMEKELHKRIIGQDEA 539
Query: 385 VKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSE 444
V A+SR+IRR RVGLK+P RP SFIF+GPTGVGK+ELAKALA + F E+A+IR+DMSE
Sbjct: 540 VSALSRSIRRTRVGLKDPKRPAGSFIFAGPTGVGKTELAKALAQFLFDDEDALIRVDMSE 599
Query: 445 FMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILED 504
F E++ S+L G+PPGYVGY EGG+LTE VRR+P++VVLFDEIEKAHPD+FN +LQ+L+D
Sbjct: 600 FSEKYAASRLFGAPPGYVGYEEGGELTEKVRRKPFSVVLFDEIEKAHPDIFNTLLQVLDD 659
Query: 505 GRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEEL 564
G LTD +GR VDFKNT++I+T+N+G+ I K GF + + +SSY R+K V+ EL
Sbjct: 660 GHLTDGQGRKVDFKNTIIILTTNLGTRDIAKTA-NTGFTMGGN-TESSYQRMKDQVSSEL 717
Query: 565 KQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVE 624
KQ FRPEFLNRLD++IVFRQLT+ +V++I D+ + ++ DRL + +EL +T++ ++ + E
Sbjct: 718 KQQFRPEFLNRLDDIIVFRQLTEPQVRQIVDLDVTKINDRLFERHMELDLTDKAKDLLAE 777
Query: 625 EGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDG 671
+G++P GARPLRR I R +ED+++EK+L ++ + + VIVD + DG
Sbjct: 778 KGFDPLLGARPLRRVIQRDIEDTISEKILMGDLHDNERVIVDAEGDG 824
>gi|183601796|ref|ZP_02963166.1| probable ATP-dependent Clp protease ATP-binding subunit
[Bifidobacterium animalis subsp. lactis HN019]
gi|219683673|ref|YP_002470056.1| protease [Bifidobacterium animalis subsp. lactis AD011]
gi|241190706|ref|YP_002968100.1| ATP-dependent Clp protease ATP-binding subunit [Bifidobacterium
animalis subsp. lactis Bl-04]
gi|241196112|ref|YP_002969667.1| ATP-dependent Clp protease ATP-binding subunit [Bifidobacterium
animalis subsp. lactis DSM 10140]
gi|384193703|ref|YP_005579449.1| ATP-dependent Clp protease ATP-binding subunit [Bifidobacterium
animalis subsp. lactis BLC1]
gi|384195264|ref|YP_005581009.1| ATP-dependent Clp protease ATP-binding subunit [Bifidobacterium
animalis subsp. lactis V9]
gi|386866851|ref|YP_006279845.1| ATP-dependent Clp protease ATP-binding subunit [Bifidobacterium
animalis subsp. animalis ATCC 25527]
gi|387820575|ref|YP_006300618.1| ATP-dependent Clp protease, ATP-binding subunit ClpC
[Bifidobacterium animalis subsp. lactis B420]
gi|387822251|ref|YP_006302200.1| ATP-dependent Clp protease, ATP-binding subunit ClpC / Negative
regulator of genetic competence clcC/mecB
[Bifidobacterium animalis subsp. lactis Bi-07]
gi|423679232|ref|ZP_17654108.1| ATP-dependent Clp protease ATP-binding subunit [Bifidobacterium
animalis subsp. lactis BS 01]
gi|61679297|gb|AAX52926.1| ClpC [Bifidobacterium animalis subsp. animalis ATCC 25527]
gi|183219402|gb|EDT90043.1| probable ATP-dependent Clp protease ATP-binding subunit
[Bifidobacterium animalis subsp. lactis HN019]
gi|219621323|gb|ACL29480.1| protease [Bifidobacterium animalis subsp. lactis AD011]
gi|240249098|gb|ACS46038.1| ATP-dependent Clp protease ATP-binding subunit [Bifidobacterium
animalis subsp. lactis Bl-04]
gi|240250666|gb|ACS47605.1| ATP-dependent Clp protease ATP-binding subunit [Bifidobacterium
animalis subsp. lactis DSM 10140]
gi|295793695|gb|ADG33230.1| ATP-dependent Clp protease ATP-binding subunit [Bifidobacterium
animalis subsp. lactis V9]
gi|345282562|gb|AEN76416.1| ATP-dependent Clp protease ATP-binding subunit [Bifidobacterium
animalis subsp. lactis BLC1]
gi|366041343|gb|EHN17838.1| ATP-dependent Clp protease ATP-binding subunit [Bifidobacterium
animalis subsp. lactis BS 01]
gi|385700934|gb|AFI62882.1| ATP-dependent Clp protease ATP-binding subunit [Bifidobacterium
animalis subsp. animalis ATCC 25527]
gi|386653276|gb|AFJ16406.1| ATP-dependent Clp protease, ATP-binding subunit ClpC
[Bifidobacterium animalis subsp. lactis B420]
gi|386654859|gb|AFJ17988.1| ATP-dependent Clp protease, ATP-binding subunit ClpC / Negative
regulator of genetic competence clcC/mecB
[Bifidobacterium animalis subsp. lactis Bi-07]
Length = 850
Score = 766 bits (1978), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/647 (58%), Positives = 510/647 (78%), Gaps = 8/647 (1%)
Query: 25 LEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLA 84
L+++G NLT A++GKLDPV+GR +IERV+ +L RRTKNNP LIGEPGVGKTA+ EGLA
Sbjct: 174 LDQFGRNLTAEAKDGKLDPVIGRSTEIERVMVVLSRRTKNNPVLIGEPGVGKTAVVEGLA 233
Query: 85 QRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVH 144
Q+I +GDVP+T++ K+V +LD+G +VAG++YRG+FEERLKK+++EIK +I+LFIDE+H
Sbjct: 234 QKIVAGDVPETLKDKQVYSLDLGSMVAGSRYRGDFEERLKKVLKEIKTRGDIVLFIDEIH 293
Query: 145 TLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEP 204
T++GAG+A+GA+ A+++LKP LARGELQ IGATT DEYRK+IEKD ALERRFQP++V EP
Sbjct: 294 TIVGAGSADGALGASDMLKPMLARGELQTIGATTTDEYRKYIEKDAALERRFQPIQVSEP 353
Query: 205 SVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRV 264
S+ ETI+ILKGLR RYE HH + TD AL SAA+LS +YI DR LPDKAIDLIDEAG+R+
Sbjct: 354 SIAETIEILKGLRARYENHHHVTITDGALQSAAELSARYIQDRNLPDKAIDLIDEAGARL 413
Query: 265 RLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKE 324
R++ P E +EL+ + +I KEK++ ++ Q FEKA ELRD++ L+A+ K KE
Sbjct: 414 RIKRLTAPPELKELDNRIARIAKEKDQTIKDQQFEKAAELRDKQEKLEAE-----RKEKE 468
Query: 325 MSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEA 384
S E E+ DV VV E I ++S TGIPV K++ ES +L+ ME+ LHKR+IGQDEA
Sbjct: 469 KSWREGES-DVRMVVDEDVIAEVISQSTGIPVFKLTQAESKKLMSMEKELHKRIIGQDEA 527
Query: 385 VKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSE 444
V A+SR+IRR RVGLK+P RP SFIF+GPTGVGK+ELAKALA + F E+A+IR+DMSE
Sbjct: 528 VSALSRSIRRTRVGLKDPKRPAGSFIFAGPTGVGKTELAKALAQFLFDDEDALIRVDMSE 587
Query: 445 FMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILED 504
F E++ S+L G+PPGYVGY EGG+LTE VRR+P++VVLFDEIEKAHPD+FN +LQ+L+D
Sbjct: 588 FSEKYAASRLFGAPPGYVGYEEGGELTEKVRRKPFSVVLFDEIEKAHPDIFNTLLQVLDD 647
Query: 505 GRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEEL 564
G LTD +GR VDFKNT++I+T+N+G+ I K GF + + +SSY R+K V+ EL
Sbjct: 648 GHLTDGQGRKVDFKNTIIILTTNLGTRDIAKTA-NTGFTMGGN-TESSYQRMKDQVSSEL 705
Query: 565 KQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVE 624
KQ FRPEFLNRLD++IVFRQLT+ +V++I D+ + ++ DRL + +EL +T++ ++ + E
Sbjct: 706 KQQFRPEFLNRLDDIIVFRQLTEPQVRQIVDLDVTKINDRLFERHMELDLTDKAKDLLAE 765
Query: 625 EGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDG 671
+G++P GARPLRR I R +ED+++EK+L ++ + + VIVD + DG
Sbjct: 766 KGFDPLLGARPLRRVIQRDIEDTISEKILMGDLHDNERVIVDAEGDG 812
>gi|118619352|ref|YP_907684.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium
ulcerans Agy99]
gi|118571462|gb|ABL06213.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium
ulcerans Agy99]
Length = 849
Score = 766 bits (1978), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/649 (58%), Positives = 503/649 (77%), Gaps = 16/649 (2%)
Query: 25 LEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLA 84
L+++G NLT A EGKLDPV+GR+ +IERV+Q+L RRTKNNP LIGEPGVGKTA+ EGLA
Sbjct: 171 LDQFGRNLTAAAMEGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLA 230
Query: 85 QRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVH 144
Q I G+VP+T++ K++ TLD+G LVAG++YRG+FEERLKK+++EI +IILFIDE+H
Sbjct: 231 QAIVHGEVPETLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDELH 290
Query: 145 TLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEP 204
TL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEYRK+IEKD ALERRFQPV+V EP
Sbjct: 291 TLVGAGAAEGAIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEP 350
Query: 205 SVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRV 264
+V+ TI+ILKGLR+RYE HH++ TD A+V+AA L+ +YI+DRFLPDKAIDLIDEAG+R+
Sbjct: 351 TVEHTIEILKGLRDRYEAHHRVSITDSAMVAAATLADRYINDRFLPDKAIDLIDEAGARM 410
Query: 265 RLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKE 324
R+R P + RE ++++ +EK A+ QDFEKA LRDRE L AQ +
Sbjct: 411 RIRRMTAPPDLREFDEKIADARREKESAIDAQDFEKAASLRDREKQLVAQ--------RA 462
Query: 325 MSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQ 381
+ + +GD+ VV EVD I ++ WTGIPV K++ E+ RLL+ME+ LHKR+IGQ
Sbjct: 463 EREKQWRSGDL-DVVAEVDDEQIAEVLGNWTGIPVFKLTEAETTRLLRMEDELHKRIIGQ 521
Query: 382 DEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLD 441
++AVKA+S+AIRR R GLK+P RP SFIF+GP+GVGK+EL+KALA + FG ++A+I++D
Sbjct: 522 EDAVKAVSKAIRRTRAGLKDPKRPSGSFIFAGPSGVGKTELSKALANFLFGDDDALIQID 581
Query: 442 MSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQI 501
M EF +R T S+L G+PPGYVGY EGGQLTE VRR+P++V LFDEIEKAH ++ N +LQ+
Sbjct: 582 MGEFHDRFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVALFDEIEKAHQEISNSLLQV 641
Query: 502 LEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVT 561
LEDGRLTD +GRTVDFKNT+LI TSN+G+S I K +G ++ Y R+K V
Sbjct: 642 LEDGRLTDGQGRTVDFKNTVLIFTSNLGTSDISKP---VGLGFSQTGGENDYERMKQKVN 698
Query: 562 EELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLK-TKDIELQVTERFRE 620
+ELK++FRPEFLNR+D++IVF QLT+ E+ + D+M+ V ++LK +KD+ L++T++ +
Sbjct: 699 DELKKHFRPEFLNRIDDIIVFHQLTRDEIIRMVDLMIGRVANQLKSSKDMALELTDKAKS 758
Query: 621 RVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDS 669
+ + G++P GARPLRR I R +ED ++EK+L E+ G V VDVD+
Sbjct: 759 LLAKRGFDPVLGARPLRRTIQREIEDQLSEKILFEEVGPGQVVTVDVDN 807
>gi|296130887|ref|YP_003638137.1| ATPase AAA-2 domain-containing protein [Cellulomonas flavigena DSM
20109]
gi|296022702|gb|ADG75938.1| ATPase AAA-2 domain protein [Cellulomonas flavigena DSM 20109]
Length = 858
Score = 766 bits (1977), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/675 (57%), Positives = 523/675 (77%), Gaps = 22/675 (3%)
Query: 3 GESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRT 62
G+ A G G SG+ + L+++G NLT+ A +GKLDPV+GR+ +IERV+Q+L RRT
Sbjct: 147 GKEPVASGGPAEGQPSGSAV--LDQFGRNLTQAARDGKLDPVIGREKEIERVMQVLSRRT 204
Query: 63 KNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEER 122
KNNP LIGEPGVGKTA+ EGLAQ I GDVP+T++ K++ TLD+G LVAG++YRG+FEER
Sbjct: 205 KNNPVLIGEPGVGKTAVVEGLAQDIVRGDVPETLKDKQLYTLDLGALVAGSRYRGDFEER 264
Query: 123 LKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEY 182
LKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEY
Sbjct: 265 LKKVLKEIRTRGDIILFIDEIHTLVGAGAAEGAIDAASILKPMLARGELQTIGATTLDEY 324
Query: 183 RKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQ 242
RK++EKDPALERRFQP++V EP++ I+ILKGLR+RYE HH++ TD ALV+AA L+ +
Sbjct: 325 RKYVEKDPALERRFQPIQVSEPNLQHAIEILKGLRDRYEAHHRVSITDAALVAAATLADR 384
Query: 243 YISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAG 302
Y++DR+LPDKAIDL+DEAG+R+R+R P E REL++++ + ++K A+ QDFEKA
Sbjct: 385 YVNDRYLPDKAIDLVDEAGARLRIRRMTAPPELRELDEQIAETRRDKESAIDEQDFEKAA 444
Query: 303 ELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKV 359
LRD+E L + V+K K + +A V EVD I +++ TGIPV K+
Sbjct: 445 RLRDQEKQLGLK---RVEKEKAWKNGDMDA------VAEVDEELIAEVLANATGIPVFKL 495
Query: 360 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 419
+ +ES RLL MEE LHKRV+GQ+ A+KA+S+AIRR R GLK+P RP SFIF+GPTGVGK
Sbjct: 496 TEEESSRLLHMEENLHKRVVGQNAAIKALSQAIRRTRAGLKDPKRPGGSFIFAGPTGVGK 555
Query: 420 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 479
+ELAKALA + FG E+A+I+LDMSEF E+HTVS+L GSPPGYVGY EGGQLTE VRR+P+
Sbjct: 556 TELAKALAEFLFGDEDALIQLDMSEFSEKHTVSRLFGSPPGYVGYDEGGQLTEKVRRKPF 615
Query: 480 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKG--- 536
+VVLFDE+EKAH D+FN +LQILEDGRLTDS+GR +DFKNT++IMT+N+G+ I KG
Sbjct: 616 SVVLFDEVEKAHADIFNSLLQILEDGRLTDSQGRVIDFKNTVIIMTTNLGTRDIAKGVMT 675
Query: 537 GRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADI 596
G + G +L D Y R+K+ V +ELK +FRPEFLNR+D+++VF QL++ E+ +I D+
Sbjct: 676 GFQAGGELATD-----YERMKAKVNDELKTHFRPEFLNRVDDVVVFPQLSQPEIFQIVDL 730
Query: 597 MLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLARE 656
M+ ++ RL+ KD+ +++T ++ + E GY+P GARPLRRAI R +ED+++EK+L E
Sbjct: 731 MIAKLDARLRDKDMSIEITPAAKKLLAERGYDPVLGARPLRRAIQREIEDTLSEKILFGE 790
Query: 657 IKEGDSVIVDVDSDG 671
+K G +VIVD +G
Sbjct: 791 LKAGQTVIVDAQGEG 805
>gi|375289379|ref|YP_005123920.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
pseudotuberculosis 3/99-5]
gi|371576668|gb|AEX40271.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
pseudotuberculosis 3/99-5]
Length = 885
Score = 766 bits (1977), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/658 (56%), Positives = 508/658 (77%), Gaps = 13/658 (1%)
Query: 14 GGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPG 73
G G N + L+++G NLT+ A++GKLDPV+GR+ +IER++Q+L RRTKNNP LIGEPG
Sbjct: 175 GAGDRSNSL-VLDQFGRNLTQAAKDGKLDPVIGREKEIERIMQVLSRRTKNNPVLIGEPG 233
Query: 74 VGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQS 133
VGKTA+ EGLA I +G VP+T++ K++ +LD+G LVAG++YRG+FEERLKK+++EI Q
Sbjct: 234 VGKTAVVEGLALDIVNGKVPETLKDKQLYSLDLGSLVAGSRYRGDFEERLKKVLKEINQR 293
Query: 134 DEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALE 193
+IILFIDE+HTL+GAGAAEGAIDAA++LKP LARGELQ IGATTLDEYRKHIEKD ALE
Sbjct: 294 GDIILFIDEIHTLVGAGAAEGAIDAASLLKPKLARGELQTIGATTLDEYRKHIEKDAALE 353
Query: 194 RRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKA 253
RRFQPV VPEPSV+ TI+ILKGLR+RYE HH++ TD AL +AAQLS +YI+DRFLPDKA
Sbjct: 354 RRFQPVNVPEPSVEMTIEILKGLRDRYEAHHRVSITDGALAAAAQLSDRYINDRFLPDKA 413
Query: 254 IDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKA 313
+DLIDEAG+R+R++ PE R+++ + ++ +EK A+ QDFEKA LRD E L
Sbjct: 414 VDLIDEAGARMRIQRMTAPESIRKVDDRIAEVRREKEAAIDAQDFEKAAGLRDTERKLNE 473
Query: 314 QISALVDKGKEMSKAETEAGDVGPV--VTEVDIQHIVSAWTGIPVEKVSTDESDRLLKME 371
+ + + + +GD+ + V E I ++ WTGIPV K++ +ES RLL+ME
Sbjct: 474 E--------RAEKEKQWRSGDLEEIAEVGEEQIAEVLGNWTGIPVFKLTEEESSRLLRME 525
Query: 372 ETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYF 431
+ LHKR+IGQ++AVKA+SRAIRR R GLK+P RP SFIF+GP+GVGK+EL+KALA + F
Sbjct: 526 DELHKRIIGQEDAVKAVSRAIRRTRAGLKDPRRPSGSFIFAGPSGVGKTELSKALANFLF 585
Query: 432 GSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAH 491
G ++A+I++DM EF +R T S+L G+PPGYVGY EGGQLTE VRR+P++VVLFDEIEKAH
Sbjct: 586 GDDDALIQIDMGEFHDRFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAH 645
Query: 492 PDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGF-DLDYDEKD 550
+++N +LQ+LEDGRLTD +GR VDFKNT+LI TSN+G+ I K +GF + + D
Sbjct: 646 KEIYNTLLQVLEDGRLTDGQGRVVDFKNTVLIFTSNLGTQDISK-AVGMGFSSVGEHDAD 704
Query: 551 SSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDI 610
Y+R+K V +ELK++FRPEFLNR+DE++VFRQLT+ ++ ++ D+++ V L KD+
Sbjct: 705 GQYSRMKQKVNDELKKHFRPEFLNRIDEVVVFRQLTQDQIVQMVDLLVSRVAKALAQKDM 764
Query: 611 ELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVD 668
+++TE+ + + G++P GARPLRR I R +ED+++EK+L E+ G+ V VDV+
Sbjct: 765 GIELTEKAKSLLARRGFDPVLGARPLRRTIQREIEDALSEKILFGEVGAGEIVTVDVE 822
>gi|154487051|ref|ZP_02028458.1| hypothetical protein BIFADO_00889 [Bifidobacterium adolescentis
L2-32]
gi|154084914|gb|EDN83959.1| ATPase family associated with various cellular activities (AAA)
[Bifidobacterium adolescentis L2-32]
Length = 864
Score = 766 bits (1977), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/647 (57%), Positives = 513/647 (79%), Gaps = 8/647 (1%)
Query: 25 LEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLA 84
L+++G NLT A GKLDPV+GR +IERV+ +L RRTKNNP LIGEPGVGKTA+ EGLA
Sbjct: 175 LDQFGRNLTAEAAAGKLDPVIGRSNEIERVMVVLSRRTKNNPVLIGEPGVGKTAVVEGLA 234
Query: 85 QRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVH 144
Q+I +GDVP+T++GK+V +LD+G +VAG++YRG+FEERLKK+++EIK +I+LFIDE+H
Sbjct: 235 QKINAGDVPETLKGKQVYSLDLGSMVAGSRYRGDFEERLKKVLKEIKTRGDIVLFIDEIH 294
Query: 145 TLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEP 204
T++GAG+A+GA+ A+++LKP LARGELQ IGATT DEYRK+IEKD ALERRFQP++V EP
Sbjct: 295 TIVGAGSADGALGASDMLKPMLARGELQTIGATTTDEYRKYIEKDAALERRFQPIQVHEP 354
Query: 205 SVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRV 264
++ ETI+ILKGLRERYE HH + TD AL +AA+LS +YI DR LPDKAIDLIDEAG+R+
Sbjct: 355 TIAETIEILKGLRERYENHHHVTITDGALQAAAELSSRYIQDRHLPDKAIDLIDEAGARL 414
Query: 265 RLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKE 324
R+R P E +EL+ + ++ +EK++A++ QDFEKA ELRD++ ++++ K KE
Sbjct: 415 RIRRLTAPPELKELDAKAAKLAEEKDQAIKDQDFEKAAELRDKQEKIESE-----RKEKE 469
Query: 325 MSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEA 384
+ E E+ DV VV E I ++S TGIPV K++ ES +L+ ME LHKR+IGQDEA
Sbjct: 470 SAWREGES-DVKMVVDEDVIAEVISQTTGIPVFKLTQAESKKLMGMESELHKRIIGQDEA 528
Query: 385 VKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSE 444
V A+SR+IRRARVGLK+P RP SFIF+GPTGVGK+ELAKALA + F E+A+IR+DMSE
Sbjct: 529 VSALSRSIRRARVGLKDPKRPAGSFIFAGPTGVGKTELAKALAEFLFDDEDALIRVDMSE 588
Query: 445 FMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILED 504
F E++ S+L G+PPGYVGY EGG+LTE VRR+P++VVLFDEIEKAHPD+FN +LQ+L+D
Sbjct: 589 FSEKYAASRLFGAPPGYVGYEEGGELTEKVRRKPFSVVLFDEIEKAHPDIFNTLLQVLDD 648
Query: 505 GRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEEL 564
G LTD +GR VDFKNT++I+T+N+G+ I K GF+L + +SSY R+K V+ EL
Sbjct: 649 GHLTDGQGRKVDFKNTIIILTTNLGTRDIAKAA-NTGFNLGTN-TESSYQRMKEQVSAEL 706
Query: 565 KQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVE 624
KQ FRPEFLNRLD++IVF+QLT+ +V++I D+ +K++ DRL + + L++T+ ++ + +
Sbjct: 707 KQQFRPEFLNRLDDIIVFKQLTEPQVRQIVDLDVKQLNDRLFDRHMSLELTDAAKDLLAQ 766
Query: 625 EGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDG 671
+G++P GARPLRR I R +ED+++EK+L ++++G V VD + +G
Sbjct: 767 KGFDPLLGARPLRRVIQRDIEDAISEKILMGDLEDGQRVKVDAEGEG 813
>gi|126697592|ref|YP_001086489.1| class III stress response-related ATPase [Clostridium difficile
630]
gi|254973677|ref|ZP_05270149.1| ATP-dependent Clp protease [Clostridium difficile QCD-66c26]
gi|255091069|ref|ZP_05320547.1| ATP-dependent Clp protease [Clostridium difficile CIP 107932]
gi|255099184|ref|ZP_05328161.1| ATP-dependent Clp protease [Clostridium difficile QCD-63q42]
gi|255304967|ref|ZP_05349139.1| ATP-dependent Clp protease [Clostridium difficile ATCC 43255]
gi|255312722|ref|ZP_05354305.1| ATP-dependent Clp protease [Clostridium difficile QCD-76w55]
gi|255515482|ref|ZP_05383158.1| ATP-dependent Clp protease [Clostridium difficile QCD-97b34]
gi|255648575|ref|ZP_05395477.1| ATP-dependent Clp protease [Clostridium difficile QCD-37x79]
gi|306518705|ref|ZP_07405052.1| ATP-dependent Clp protease [Clostridium difficile QCD-32g58]
gi|384359346|ref|YP_006197198.1| ATP-dependent Clp protease [Clostridium difficile BI1]
gi|423080678|ref|ZP_17069297.1| negative regulator of genetic competence ClpC/MecB [Clostridium
difficile 002-P50-2011]
gi|423085125|ref|ZP_17073582.1| negative regulator of genetic competence ClpC/MecB [Clostridium
difficile 050-P50-2011]
gi|423089367|ref|ZP_17077727.1| negative regulator of genetic competence ClpC/MecB [Clostridium
difficile 70-100-2010]
gi|115249029|emb|CAJ66840.1| class III stress response-related ATPase, AAA+ superfamily
[Clostridium difficile 630]
gi|357550773|gb|EHJ32582.1| negative regulator of genetic competence ClpC/MecB [Clostridium
difficile 050-P50-2011]
gi|357552742|gb|EHJ34509.1| negative regulator of genetic competence ClpC/MecB [Clostridium
difficile 002-P50-2011]
gi|357558303|gb|EHJ39802.1| negative regulator of genetic competence ClpC/MecB [Clostridium
difficile 70-100-2010]
Length = 815
Score = 766 bits (1977), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/659 (57%), Positives = 516/659 (78%), Gaps = 17/659 (2%)
Query: 15 GGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGV 74
G + + L++YG NLT A++ K+DPV+GR+ +I+RV+QIL RRTKNNP LIG+PGV
Sbjct: 158 GNQNQAESKVLDKYGRNLTLYAKQNKIDPVIGREKEIQRVIQILSRRTKNNPVLIGDPGV 217
Query: 75 GKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSD 134
GKTAIAEGLA IA G+VP+T++ K + +L+MG L+AG KYRGEFEER+K++++E+ ++
Sbjct: 218 GKTAIAEGLATNIALGNVPETLKNKTLYSLEMGSLLAGAKYRGEFEERIKEVVDEVVKNG 277
Query: 135 EIILFIDEVHTLIGAGA-AEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALE 193
IILFIDE+HT+IGAG+ EG+IDA+NILKP+LARGE+Q IGATT+DEYRKH+EKD ALE
Sbjct: 278 NIILFIDEMHTIIGAGSTGEGSIDASNILKPALARGEIQVIGATTIDEYRKHVEKDSALE 337
Query: 194 RRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKA 253
RRFQPV V EP+ +++I+IL+GLR++YE HHK++ TD+A+ +A +LS +YISDR+LPDKA
Sbjct: 338 RRFQPVMVDEPTKEDSIKILEGLRDKYEAHHKVKITDDAIKAAVELSTRYISDRYLPDKA 397
Query: 254 IDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKA 313
IDLIDEA S+VRL+ P E ++LE E+ I KEK EAVR QDFEKA ++RD + LK
Sbjct: 398 IDLIDEAASKVRLKENTPPSEIKKLELEIENIDKEKEEAVRCQDFEKAAKIRDEQGLLKK 457
Query: 314 QISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEET 373
Q+ + ++ + SK ++ D G V+ EV V WTGIPV K+ +E+DRLL++EE
Sbjct: 458 QLEDVRERWNKSSK-HSDLVD-GEVIAEV-----VGLWTGIPVNKILEEEADRLLRLEEI 510
Query: 374 LHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGS 433
LH RVIGQ++AVK+IS+AIRR+R GLK+PNRPI SF+F GPTGVGK+EL+KALA FG
Sbjct: 511 LHNRVIGQEQAVKSISKAIRRSRAGLKDPNRPIGSFLFLGPTGVGKTELSKALAEVQFGD 570
Query: 434 EEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPD 493
E +IR+DMSE+ME+H VS++IGSPPGYVG+ EGGQLTE VRR PY+V+LFDEIEKAHPD
Sbjct: 571 ENQIIRIDMSEYMEKHAVSRMIGSPPGYVGHDEGGQLTEKVRRNPYSVILFDEIEKAHPD 630
Query: 494 VFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR--IGFDL---DYDE 548
VFN++LQIL+DGRLTDSKGRTVDFKNT++IMTSNVG+S I GR+ +GF + D +E
Sbjct: 631 VFNILLQILDDGRLTDSKGRTVDFKNTIVIMTSNVGASTI---GRQKTLGFSIAKGDEEE 687
Query: 549 KDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTK 608
K S Y ++K + ELKQ FRPEFLNR+D++IVF L + + +I +M ++ +RLK
Sbjct: 688 K-SQYEKMKENIMGELKQRFRPEFLNRIDDIIVFHSLNENHISKIVLLMAAKLQERLKEM 746
Query: 609 DIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDV 667
DI+L++++ + + + G++ YGARPL+RA+ + LED ++E +L +K+G +V+ V
Sbjct: 747 DIKLEMSDEAVKLISKSGFDLEYGARPLKRALQKELEDELSEAILKGNVKKGSNVVAKV 805
>gi|392401263|ref|YP_006437863.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
pseudotuberculosis Cp162]
gi|390532341|gb|AFM08070.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
pseudotuberculosis Cp162]
Length = 874
Score = 766 bits (1977), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/657 (57%), Positives = 509/657 (77%), Gaps = 11/657 (1%)
Query: 14 GGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPG 73
G G N + L+++G NLT+ A++GKLDPVVGR+ +IER++Q+L RRTKNNP LIGEPG
Sbjct: 164 GAGDRSNSL-VLDQFGRNLTQAAKDGKLDPVVGREKEIERIMQVLSRRTKNNPVLIGEPG 222
Query: 74 VGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQS 133
VGKTA+ EGLA I +G VP+T++ K++ +LD+G LVAG++YRG+FEERLKK+++EI Q
Sbjct: 223 VGKTAVVEGLALDIVNGKVPETLKDKQLYSLDLGSLVAGSRYRGDFEERLKKVLKEINQR 282
Query: 134 DEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALE 193
+IILFIDE+HTL+GAGAAEGAIDAA++LKP LARGELQ IGATTLDEYRKHIEKD ALE
Sbjct: 283 GDIILFIDEIHTLVGAGAAEGAIDAASLLKPKLARGELQTIGATTLDEYRKHIEKDAALE 342
Query: 194 RRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKA 253
RRFQPV VPEPSV+ TI+ILKGLR+RYE HH++ TD AL +AAQLS +YI+DRFLPDKA
Sbjct: 343 RRFQPVNVPEPSVEMTIEILKGLRDRYEAHHRVSITDGALAAAAQLSDRYINDRFLPDKA 402
Query: 254 IDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKA 313
+DLIDEAG+R+R++ PE R+++ + ++ +EK A+ QDFEKA LRD E L
Sbjct: 403 VDLIDEAGARMRIQRMTAPESIRKVDDRIAEVRREKEAAIDAQDFEKAAGLRDTERKLNE 462
Query: 314 QISALVDKGKEM-SKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEE 372
+ + +K K+ S A E +VG E I ++ WTGIPV K++ +ES RLL+ME+
Sbjct: 463 ERA---EKEKQWRSGALEEIAEVG----EEQIAEVLGNWTGIPVFKLTEEESSRLLRMED 515
Query: 373 TLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFG 432
LHKR+IGQ++AVKA+SRAIRR R GLK+P RP SFIF+GP+GVGK+EL+KALA + FG
Sbjct: 516 ELHKRIIGQEDAVKAVSRAIRRTRAGLKDPRRPSGSFIFAGPSGVGKTELSKALANFLFG 575
Query: 433 SEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHP 492
++A+I++DM EF +R T S+L G+PPGYVGY EGGQLTE VRR+P++VVLFDEIEKAH
Sbjct: 576 DDDALIQIDMGEFHDRFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHK 635
Query: 493 DVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGF-DLDYDEKDS 551
+++N +LQ+LEDGRLTD +GR VDFKNT+LI TSN+G+ I K +GF + + D
Sbjct: 636 EIYNTLLQVLEDGRLTDGQGRVVDFKNTVLIFTSNLGTQDISK-AVGMGFSSVGEHDADG 694
Query: 552 SYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIE 611
Y+R+K V +ELK++FRPEFLNR+DE++VF QLT+ ++ ++ D+++ V L KD+
Sbjct: 695 QYSRMKQKVNDELKKHFRPEFLNRIDEVVVFHQLTQDQIVQMVDLLVSRVAKALAQKDMG 754
Query: 612 LQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVD 668
+++TE+ + + G++P GARPLRR I R +ED+++EK+L E+ G+ V VDV+
Sbjct: 755 IELTEKAKSLLARRGFDPVLGARPLRRTIQREIEDALSEKILFGEVGAGEIVTVDVE 811
>gi|332671844|ref|YP_004454852.1| ATPase AAA-2 domain-containing protein [Cellulomonas fimi ATCC 484]
gi|332340882|gb|AEE47465.1| ATPase AAA-2 domain protein [Cellulomonas fimi ATCC 484]
Length = 860
Score = 765 bits (1976), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/675 (58%), Positives = 526/675 (77%), Gaps = 22/675 (3%)
Query: 3 GESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRT 62
G+ A G G SG+ + L+++G NLT+ A +GKLDPV+GR+ +IERV+Q+L RRT
Sbjct: 147 GKEPVAAGGPQEGQPSGSAV--LDQFGRNLTQAARDGKLDPVIGREKEIERVMQVLSRRT 204
Query: 63 KNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEER 122
KNNP LIGEPGVGKTA+ EGLAQ I GDVP+T++ K++ TLD+G LVAG++YRG+FEER
Sbjct: 205 KNNPVLIGEPGVGKTAVVEGLAQDIVRGDVPETLKDKQLYTLDLGALVAGSRYRGDFEER 264
Query: 123 LKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEY 182
LKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEY
Sbjct: 265 LKKVLKEIRTRGDIILFIDEIHTLVGAGAAEGAIDAASILKPMLARGELQTIGATTLDEY 324
Query: 183 RKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQ 242
RK++EKDPALERRFQP++V EP++ I+ILKGLR+RYE HH++ TD ALV+AA L+ +
Sbjct: 325 RKYVEKDPALERRFQPIQVAEPNLQHAIEILKGLRDRYEAHHRVSITDAALVAAATLADR 384
Query: 243 YISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAG 302
Y++DR+LPDKAIDL+DEAG+R+R+R P E REL++++ + ++K A+ QDFEKA
Sbjct: 385 YVNDRYLPDKAIDLVDEAGARLRIRRMTAPPELRELDEQIAETRRDKESAIDEQDFEKAA 444
Query: 303 ELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKV 359
LRD E L K +E KA ++GD+ V EVD I +++ TGIPV K+
Sbjct: 445 RLRDAEKQLGL-------KRQEKEKA-WKSGDL-DAVAEVDEELIAEVLANATGIPVFKL 495
Query: 360 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 419
+ +ES RLL+ME+ LHKRV+GQD A+KA+S+AIRR R GLK+P RP SFIF+GPTGVGK
Sbjct: 496 TEEESSRLLRMEDELHKRVVGQDAAIKALSQAIRRTRAGLKDPKRPGGSFIFAGPTGVGK 555
Query: 420 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 479
+ELAKALA + FG E+A+I+LDMSEF E+HTVS+L GSPPGYVGY EGGQLTE VRRRP+
Sbjct: 556 TELAKALAEFLFGDEDALIQLDMSEFSEKHTVSRLFGSPPGYVGYDEGGQLTEKVRRRPF 615
Query: 480 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKG--- 536
+VVLFDE+EKAH D+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N+G+ I KG
Sbjct: 616 SVVLFDEVEKAHADIFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNLGTRDIAKGLQT 675
Query: 537 GRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADI 596
G + G DL +SY R+K+ V +ELK +FRPEFLNR+D+++VF QL++ E+ I D+
Sbjct: 676 GFQAGGDL-----STSYERMKAKVNDELKTHFRPEFLNRVDDVVVFPQLSQPEIFAIVDL 730
Query: 597 MLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLARE 656
M+ ++ RL+ KD+ +++T ++ + E+GY+P GARPLRRAI R +ED+++EK+L E
Sbjct: 731 MVAKLDKRLRDKDMGIELTPAAKKLLSEKGYDPVLGARPLRRAIQRDIEDTLSEKILFGE 790
Query: 657 IKEGDSVIVDVDSDG 671
+K G V+VD + +G
Sbjct: 791 LKAGQLVVVDAEGEG 805
>gi|255654110|ref|ZP_05399519.1| ATP-dependent Clp protease [Clostridium difficile QCD-23m63]
gi|296449851|ref|ZP_06891618.1| ATPase with chaperone activity, ATP-binding subunit [Clostridium
difficile NAP08]
gi|296877915|ref|ZP_06901935.1| ATPase with chaperone activity, ATP-binding subunit [Clostridium
difficile NAP07]
gi|296261338|gb|EFH08166.1| ATPase with chaperone activity, ATP-binding subunit [Clostridium
difficile NAP08]
gi|296431112|gb|EFH16939.1| ATPase with chaperone activity, ATP-binding subunit [Clostridium
difficile NAP07]
Length = 815
Score = 765 bits (1976), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/659 (57%), Positives = 516/659 (78%), Gaps = 17/659 (2%)
Query: 15 GGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGV 74
G + + L++YG NLT A++ K+DPV+GR+ +I+RV+QIL RRTKNNP LIG+PGV
Sbjct: 158 GNQNQAESKVLDKYGRNLTLYAKQNKIDPVIGREKEIQRVIQILSRRTKNNPVLIGDPGV 217
Query: 75 GKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSD 134
GKTAIAEGLA IA G+VP+T++ K + +L+MG L+AG KYRGEFEER+K++++E+ ++
Sbjct: 218 GKTAIAEGLATNIALGNVPETLKNKTLYSLEMGSLLAGAKYRGEFEERIKEVVDEVVKNG 277
Query: 135 EIILFIDEVHTLIGAGA-AEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALE 193
IILFIDE+HT+IGAG+ EG+IDA+NILKP+LARGE+Q IGATT+DEYRKH+EKD ALE
Sbjct: 278 NIILFIDEMHTIIGAGSTGEGSIDASNILKPALARGEIQVIGATTIDEYRKHVEKDSALE 337
Query: 194 RRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKA 253
RRFQPV V EP+ +++I+IL+GLR++YE HHK++ TD+A+ +A +LS +YISDR+LPDKA
Sbjct: 338 RRFQPVMVDEPTKEDSIKILEGLRDKYEAHHKVKITDDAIKAAVELSTRYISDRYLPDKA 397
Query: 254 IDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKA 313
IDLIDEA S+VRL+ P E ++LE E+ I KEK EAVR QDFEKA ++RD + LK
Sbjct: 398 IDLIDEAASKVRLKENTPPSEIKKLELEIENIDKEKEEAVRCQDFEKAAKIRDEQGLLKK 457
Query: 314 QISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEET 373
Q+ + ++ + SK ++ D G V+ EV V WTGIPV K+ +E+DRLL++EE
Sbjct: 458 QLEDVRERWSKSSK-HSDLVD-GEVIAEV-----VGLWTGIPVNKILEEEADRLLRLEEI 510
Query: 374 LHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGS 433
LH RVIGQ++AVK+IS+AIRR+R GLK+PNRPI SF+F GPTGVGK+EL+KALA FG
Sbjct: 511 LHNRVIGQEQAVKSISKAIRRSRAGLKDPNRPIGSFLFLGPTGVGKTELSKALAEVQFGD 570
Query: 434 EEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPD 493
E +IR+DMSE+ME+H VS++IGSPPGYVG+ EGGQLTE VRR PY+V+LFDEIEKAHPD
Sbjct: 571 ENQIIRIDMSEYMEKHAVSRMIGSPPGYVGHDEGGQLTEKVRRNPYSVILFDEIEKAHPD 630
Query: 494 VFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR--IGFDL---DYDE 548
VFN++LQIL+DGRLTDSKGRTVDFKNT++IMTSNVG+S I GR+ +GF + D +E
Sbjct: 631 VFNILLQILDDGRLTDSKGRTVDFKNTIVIMTSNVGASTI---GRQKTLGFSIAKGDEEE 687
Query: 549 KDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTK 608
K S Y ++K + ELKQ FRPEFLNR+D++IVF L + + +I +M ++ +RLK
Sbjct: 688 K-SQYEKMKENIMGELKQRFRPEFLNRIDDIIVFHSLNENHISKIVLLMAAKLQERLKEM 746
Query: 609 DIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDV 667
DI+L++++ + + + G++ YGARPL+RA+ + LED ++E +L +K+G +V+ V
Sbjct: 747 DIKLEMSDEAVKLISKSGFDLEYGARPLKRALQKELEDELSEAILKGNVKKGSNVVAKV 805
>gi|374578908|ref|ZP_09652002.1| ATPase with chaperone activity, ATP-binding subunit
[Desulfosporosinus youngiae DSM 17734]
gi|374414990|gb|EHQ87425.1| ATPase with chaperone activity, ATP-binding subunit
[Desulfosporosinus youngiae DSM 17734]
Length = 813
Score = 765 bits (1976), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/646 (60%), Positives = 509/646 (78%), Gaps = 9/646 (1%)
Query: 23 PTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEG 82
P L E+G +LT A EG+LDPV+GR+ +IERV+Q+L RRTKNNP LIGEPGVGKTAIAEG
Sbjct: 168 PALNEFGRDLTLQAREGRLDPVIGREKEIERVIQVLSRRTKNNPALIGEPGVGKTAIAEG 227
Query: 83 LAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDE 142
LAQ I + VP+ + K+VITLD+ +VAG+KYRGEFEERLKK+MEEI+ IILFIDE
Sbjct: 228 LAQGIVNNRVPEILVNKRVITLDLSAMVAGSKYRGEFEERLKKVMEEIRADGNIILFIDE 287
Query: 143 VHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVP 202
+HTLIGAGAAEGAIDAANILKP+LARGELQCIGATTL+EYRK+IEKD ALERRFQP+ V
Sbjct: 288 LHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLEEYRKYIEKDTALERRFQPITVG 347
Query: 203 EPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGS 262
EP+V+E I IL GLR+RYE HH+++ TDEA+ +AA+LS +YISDRFLPDKAIDL+DEA S
Sbjct: 348 EPTVEEAIGILSGLRDRYEAHHRVKITDEAIEAAARLSDRYISDRFLPDKAIDLMDEAAS 407
Query: 263 RVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKG 322
RVRL P + + LE+E ++ KEK AV Q+FEKA ++RD+E ++++++ D
Sbjct: 408 RVRLTSYTAPPDLKLLEEEAERLKKEKEAAVSSQEFEKAAQIRDQEQKVRSELAEQRDVW 467
Query: 323 KEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQD 382
+ E +VT DI IV++WTGIPV+K++ +ES+RLL +E+ LH+R+IGQ+
Sbjct: 468 QNKRYKEN------VMVTGDDIAQIVASWTGIPVKKLAEEESERLLHLEDLLHQRLIGQE 521
Query: 383 EAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDM 442
+AV A++RA+RRAR GLK+P RPI SFIF GPTGVGK+EL ALA FG E+A+IR+DM
Sbjct: 522 DAVTAVARAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELGLALAEGMFGDEKALIRIDM 581
Query: 443 SEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQIL 502
SE+ME+H VS+L+G+PPGY+G+ EGGQLTEAVRR+PY+VVL DEIEKAHP+ FN++LQ+L
Sbjct: 582 SEYMEKHAVSRLVGAPPGYIGHDEGGQLTEAVRRKPYSVVLLDEIEKAHPEAFNILLQVL 641
Query: 503 EDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTE 562
EDGRLTD+KGRTVDF+NT++IMTSNVGSS ++K +GF DEK + Y ++ V E
Sbjct: 642 EDGRLTDTKGRTVDFRNTVIIMTSNVGSSFLKKEA--MGFAAKKDEK-TDYKNMRGHVME 698
Query: 563 ELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERV 622
ELK+ FRPEFLNR+DE++VF L + +I++I++++V RL +ELQV + E +
Sbjct: 699 ELKRSFRPEFLNRIDELVVFHSLQAEHLMKISEILVRQVNKRLIENGLELQVEKSAIELI 758
Query: 623 VEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVD 668
+EG +P +GARPLRRAI RL+ED+++EK+L E K GD V V+ +
Sbjct: 759 AKEGNDPIFGARPLRRAIQRLIEDALSEKILEGEFKNGDRVRVEAE 804
>gi|260681795|ref|YP_003213080.1| ATP-dependent Clp protease [Clostridium difficile CD196]
gi|260685392|ref|YP_003216525.1| ATP-dependent Clp protease [Clostridium difficile R20291]
gi|260207958|emb|CBA60088.1| ATP-dependent Clp protease [Clostridium difficile CD196]
gi|260211408|emb|CBE01489.1| ATP-dependent Clp protease [Clostridium difficile R20291]
Length = 749
Score = 765 bits (1976), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/659 (57%), Positives = 516/659 (78%), Gaps = 17/659 (2%)
Query: 15 GGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGV 74
G + + L++YG NLT A++ K+DPV+GR+ +I+RV+QIL RRTKNNP LIG+PGV
Sbjct: 92 GNQNQAESKVLDKYGRNLTLYAKQNKIDPVIGREKEIQRVIQILSRRTKNNPVLIGDPGV 151
Query: 75 GKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSD 134
GKTAIAEGLA IA G+VP+T++ K + +L+MG L+AG KYRGEFEER+K++++E+ ++
Sbjct: 152 GKTAIAEGLATNIALGNVPETLKNKTLYSLEMGSLLAGAKYRGEFEERIKEVVDEVVKNG 211
Query: 135 EIILFIDEVHTLIGAGA-AEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALE 193
IILFIDE+HT+IGAG+ EG+IDA+NILKP+LARGE+Q IGATT+DEYRKH+EKD ALE
Sbjct: 212 NIILFIDEMHTIIGAGSTGEGSIDASNILKPALARGEIQVIGATTIDEYRKHVEKDSALE 271
Query: 194 RRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKA 253
RRFQPV V EP+ +++I+IL+GLR++YE HHK++ TD+A+ +A +LS +YISDR+LPDKA
Sbjct: 272 RRFQPVMVDEPTKEDSIKILEGLRDKYEAHHKVKITDDAIKAAVELSTRYISDRYLPDKA 331
Query: 254 IDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKA 313
IDLIDEA S+VRL+ P E ++LE E+ I KEK EAVR QDFEKA ++RD + LK
Sbjct: 332 IDLIDEAASKVRLKENTPPSEIKKLELEIENIDKEKEEAVRCQDFEKAAKIRDEQGLLKK 391
Query: 314 QISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEET 373
Q+ + ++ + SK ++ D G V+ EV V WTGIPV K+ +E+DRLL++EE
Sbjct: 392 QLEDVRERWNKSSK-HSDLVD-GEVIAEV-----VGLWTGIPVNKILEEEADRLLRLEEI 444
Query: 374 LHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGS 433
LH RVIGQ++AVK+IS+AIRR+R GLK+PNRPI SF+F GPTGVGK+EL+KALA FG
Sbjct: 445 LHNRVIGQEQAVKSISKAIRRSRAGLKDPNRPIGSFLFLGPTGVGKTELSKALAEVQFGD 504
Query: 434 EEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPD 493
E +IR+DMSE+ME+H VS++IGSPPGYVG+ EGGQLTE VRR PY+V+LFDEIEKAHPD
Sbjct: 505 ENQIIRIDMSEYMEKHAVSRMIGSPPGYVGHDEGGQLTEKVRRNPYSVILFDEIEKAHPD 564
Query: 494 VFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR--IGFDL---DYDE 548
VFN++LQIL+DGRLTDSKGRTVDFKNT++IMTSNVG+S I GR+ +GF + D +E
Sbjct: 565 VFNILLQILDDGRLTDSKGRTVDFKNTIVIMTSNVGASTI---GRQKTLGFSIAKGDEEE 621
Query: 549 KDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTK 608
K S Y ++K + ELKQ FRPEFLNR+D++IVF L + + +I +M ++ +RLK
Sbjct: 622 K-SQYEKMKENIMGELKQRFRPEFLNRIDDIIVFHSLNENHISKIVLLMAAKLQERLKEM 680
Query: 609 DIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDV 667
DI+L++++ + + + G++ YGARPL+RA+ + LED ++E +L +K+G +V+ V
Sbjct: 681 DIKLEMSDEAVKLISKSGFDLEYGARPLKRALQKELEDELSEAILKGNVKKGSNVVAKV 739
>gi|111021395|ref|YP_704367.1| ATP-binding subunit of ATP-dependent Clp protease [Rhodococcus
jostii RHA1]
gi|384107232|ref|ZP_10008133.1| ATP-binding subunit of ATP-dependent Clp protease [Rhodococcus
imtechensis RKJ300]
gi|419966758|ref|ZP_14482676.1| ATP-binding subunit of ATP-dependent Clp protease [Rhodococcus
opacus M213]
gi|424854680|ref|ZP_18279038.1| ATP-dependent chaperone ClpB [Rhodococcus opacus PD630]
gi|110820925|gb|ABG96209.1| ATP-binding subunit of ATP-dependent Clp protease [Rhodococcus
jostii RHA1]
gi|356664727|gb|EHI44820.1| ATP-dependent chaperone ClpB [Rhodococcus opacus PD630]
gi|383832621|gb|EID72092.1| ATP-binding subunit of ATP-dependent Clp protease [Rhodococcus
imtechensis RKJ300]
gi|414567867|gb|EKT78642.1| ATP-binding subunit of ATP-dependent Clp protease [Rhodococcus
opacus M213]
Length = 845
Score = 765 bits (1976), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/670 (57%), Positives = 512/670 (76%), Gaps = 17/670 (2%)
Query: 4 ESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTK 63
E EA G G+ + L+++G NLT+ A EGKLDPV+GR +IERV+Q+L RRTK
Sbjct: 149 EPAEAGGTRGEAGTPSTSL-VLDQFGRNLTQAALEGKLDPVIGRSKEIERVMQVLSRRTK 207
Query: 64 NNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERL 123
NNP LIGEPGVGKTA+ EGLAQ I +G+VP+T++ K++ TLD+G LVAG++YRG+FEERL
Sbjct: 208 NNPVLIGEPGVGKTAVVEGLAQAIVNGEVPETLKDKQLYTLDLGSLVAGSRYRGDFEERL 267
Query: 124 KKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYR 183
KK+++EI +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEYR
Sbjct: 268 KKVLKEINTRGDIILFIDELHTLVGAGAAEGAIDAASILKPKLARGELQTIGATTLDEYR 327
Query: 184 KHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQY 243
K+IEKD ALERRFQPV+V EP+V+ TI+ILKGLR+RYE HH++ TD ALV+AA L+ +Y
Sbjct: 328 KYIEKDAALERRFQPVQVGEPTVEHTIEILKGLRDRYEAHHRVSITDGALVAAATLADRY 387
Query: 244 ISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGE 303
I+DRFLPDKAIDLIDEAG+R+R+R P + RE + ++ +EK A+ QDFEKA
Sbjct: 388 INDRFLPDKAIDLIDEAGARMRIRRMTAPPDLREFDDKIADARREKESAIDAQDFEKAAN 447
Query: 304 LRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKVS 360
LRD+E L AQ + + + +GD+ V+ EVD I ++ WTGIPV K++
Sbjct: 448 LRDKEKTLVAQ--------RAEREKQWRSGDL-DVIAEVDDEQIAEVLGNWTGIPVFKLT 498
Query: 361 TDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 420
+E+ RLL+MEE LHKR+IGQ++AVKA+++AIRR R GLK+P RP SFIF+GP+GVGK+
Sbjct: 499 EEETTRLLRMEEELHKRIIGQEDAVKAVAKAIRRTRAGLKDPKRPSGSFIFAGPSGVGKT 558
Query: 421 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 480
ELAK+LA + FG ++A+I++DM EF +R T S+L G+PPGYVGY EGGQLTE VRR+P++
Sbjct: 559 ELAKSLANFLFGEDDALIQIDMGEFHDRFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFS 618
Query: 481 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI 540
VVLFDEIEKAH +++N +LQ+LEDGRLTD +GRTVDFKNT+LI TSN+G+S I K +
Sbjct: 619 VVLFDEIEKAHQEIYNTLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGTSDISKA---V 675
Query: 541 GFDLDYDEKD-SSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 599
G + D S+Y R+K V +ELK++FRPEFLNR+D+++VF QLT ++ ++ D+M+
Sbjct: 676 GLGFTSGKGDESNYERMKLKVHDELKKHFRPEFLNRIDDIVVFHQLTTEQIVQMVDLMVA 735
Query: 600 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 659
V LK KD+ ++VT++ + + + G++P GARPLRR I R +ED ++EK+L E+
Sbjct: 736 RVEVALKNKDMTMEVTDKAKSLLAKRGFDPVLGARPLRRTIQREIEDQLSEKILFGEVGP 795
Query: 660 GDSVIVDVDS 669
G V VDV++
Sbjct: 796 GQIVYVDVEN 805
>gi|397734515|ref|ZP_10501221.1| negative regulator of genetic competence clpC/mecB [Rhodococcus sp.
JVH1]
gi|396929638|gb|EJI96841.1| negative regulator of genetic competence clpC/mecB [Rhodococcus sp.
JVH1]
Length = 824
Score = 765 bits (1976), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/670 (57%), Positives = 512/670 (76%), Gaps = 17/670 (2%)
Query: 4 ESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTK 63
E EA G G+ + L+++G NLT+ A EGKLDPV+GR +IERV+Q+L RRTK
Sbjct: 128 EPAEAGGTRGEAGTPSTSL-VLDQFGRNLTQAALEGKLDPVIGRSKEIERVMQVLSRRTK 186
Query: 64 NNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERL 123
NNP LIGEPGVGKTA+ EGLAQ I +G+VP+T++ K++ TLD+G LVAG++YRG+FEERL
Sbjct: 187 NNPVLIGEPGVGKTAVVEGLAQAIVNGEVPETLKDKQLYTLDLGSLVAGSRYRGDFEERL 246
Query: 124 KKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYR 183
KK+++EI +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEYR
Sbjct: 247 KKVLKEINTRGDIILFIDELHTLVGAGAAEGAIDAASILKPKLARGELQTIGATTLDEYR 306
Query: 184 KHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQY 243
K+IEKD ALERRFQPV+V EP+V+ TI+ILKGLR+RYE HH++ TD ALV+AA L+ +Y
Sbjct: 307 KYIEKDAALERRFQPVQVGEPTVEHTIEILKGLRDRYEAHHRVSITDGALVAAATLADRY 366
Query: 244 ISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGE 303
I+DRFLPDKAIDLIDEAG+R+R+R P + RE + ++ +EK A+ QDFEKA
Sbjct: 367 INDRFLPDKAIDLIDEAGARMRIRRMTAPPDLREFDDKIADARREKESAIDAQDFEKAAN 426
Query: 304 LRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKVS 360
LRD+E L AQ + + + +GD+ V+ EVD I ++ WTGIPV K++
Sbjct: 427 LRDKEKTLVAQ--------RAEREKQWRSGDL-DVIAEVDDEQIAEVLGNWTGIPVFKLT 477
Query: 361 TDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 420
+E+ RLL+MEE LHKR+IGQ++AVKA+++AIRR R GLK+P RP SFIF+GP+GVGK+
Sbjct: 478 EEETTRLLRMEEELHKRIIGQEDAVKAVAKAIRRTRAGLKDPKRPSGSFIFAGPSGVGKT 537
Query: 421 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 480
ELAK+LA + FG ++A+I++DM EF +R T S+L G+PPGYVGY EGGQLTE VRR+P++
Sbjct: 538 ELAKSLANFLFGEDDALIQIDMGEFHDRFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFS 597
Query: 481 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI 540
VVLFDEIEKAH +++N +LQ+LEDGRLTD +GRTVDFKNT+LI TSN+G+S I K +
Sbjct: 598 VVLFDEIEKAHQEIYNTLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGTSDISKA---V 654
Query: 541 GFDLDYDEKD-SSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 599
G + D S+Y R+K V +ELK++FRPEFLNR+D+++VF QLT ++ ++ D+M+
Sbjct: 655 GLGFTSGKGDESNYERMKLKVHDELKKHFRPEFLNRIDDIVVFHQLTTEQIVQMVDLMVA 714
Query: 600 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 659
V LK KD+ ++VT++ + + + G++P GARPLRR I R +ED ++EK+L E+
Sbjct: 715 RVEVALKNKDMTMEVTDKAKSLLAKRGFDPVLGARPLRRTIQREIEDQLSEKILFGEVGP 774
Query: 660 GDSVIVDVDS 669
G V VDV++
Sbjct: 775 GQIVYVDVEN 784
>gi|261337923|ref|ZP_05965807.1| negative regulator of genetic competence ClpC/MecB [Bifidobacterium
gallicum DSM 20093]
gi|270277412|gb|EFA23266.1| negative regulator of genetic competence ClpC/MecB [Bifidobacterium
gallicum DSM 20093]
Length = 856
Score = 765 bits (1975), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 379/665 (56%), Positives = 513/665 (77%), Gaps = 10/665 (1%)
Query: 8 AVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPC 67
A GV + L+++G NLT A+EGKLDPV+GR +IERV+ +L RRTKNNP
Sbjct: 155 ANAGGVSDKARQTGSAILDQFGRNLTAEAQEGKLDPVIGRSSEIERVMVVLSRRTKNNPV 214
Query: 68 LIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLM 127
LIG+PGVGKTA+ EGLAQ+I +GDVP+T++ K+V +LD+G +VAG++YRG+FEERLKK++
Sbjct: 215 LIGDPGVGKTAVVEGLAQKIVAGDVPETLKDKQVYSLDLGSMVAGSRYRGDFEERLKKVL 274
Query: 128 EEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIE 187
+EIK +I+LFIDE+HT++GAG+A+GA+ A+++LKP LARGELQ IGATT DEYRK+IE
Sbjct: 275 KEIKARGDIVLFIDEIHTIVGAGSADGALGASDMLKPMLARGELQTIGATTTDEYRKYIE 334
Query: 188 KDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDR 247
KD ALERRFQP++V EPS+ ETI+ILKGLR RYE HH + TD A+ SAA+LS +YI DR
Sbjct: 335 KDAALERRFQPIQVNEPSIAETIEILKGLRARYENHHHVTITDAAIQSAAELSARYIQDR 394
Query: 248 FLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDR 307
LPDKAIDLIDEAG+R+R++ P E +EL+ ++ ++ KEK+EA++ Q+FEKA ELRDR
Sbjct: 395 RLPDKAIDLIDEAGARLRIKRLTAPPELKELDAKVAKVAKEKDEAIKDQEFEKAAELRDR 454
Query: 308 EMDLKAQISALVDKGKEMSKAETEAG-DVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDR 366
+ L+A+ KE +A E G DV VV E I ++S TGIPV K++ ES +
Sbjct: 455 QEKLEAE-------RKEKEQAWREGGSDVKMVVDEDVIAEVISQSTGIPVVKLTQAESKK 507
Query: 367 LLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKAL 426
LL ME LHKR+IGQDEAV A+SR+IRR RVGLK P RP SFIF+GPTGVGK+ELAKAL
Sbjct: 508 LLNMEAELHKRIIGQDEAVSALSRSIRRTRVGLKGPKRPAGSFIFAGPTGVGKTELAKAL 567
Query: 427 AAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDE 486
A + F ++A+IR+DMSEF E++ S+L G+PPGYVGY EGG+LTE VRR+P++VVLFDE
Sbjct: 568 AQFLFDDDDALIRVDMSEFSEKYAASRLFGAPPGYVGYEEGGELTEKVRRKPFSVVLFDE 627
Query: 487 IEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDY 546
IEKAHPD+FN +LQ+L+DG LTD +GR VDFKNT++I+T+N+G+ I K GF+L
Sbjct: 628 IEKAHPDIFNTLLQVLDDGHLTDGQGRKVDFKNTIIILTTNLGTRDIAKAA-NTGFNLGG 686
Query: 547 DEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLK 606
+ +SSY R+K V+ ELKQ FRPEFLNRLD++IVFRQLT+ +V++I D+ + + +RL
Sbjct: 687 N-TESSYQRMKDQVSNELKQQFRPEFLNRLDDIIVFRQLTEGQVRQIVDLDVNLLNERLF 745
Query: 607 TKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVD 666
+ +EL +T+ ++ + ++G++P GARPLRR I R +ED+++EK+L E+ + + VIVD
Sbjct: 746 ERHMELDLTDAAKDLLAQKGFDPLLGARPLRRVIQRDIEDAISEKILMGELNDNERVIVD 805
Query: 667 VDSDG 671
+ +G
Sbjct: 806 AEGEG 810
>gi|288574596|ref|ZP_06392953.1| ATPase AAA-2 domain protein [Dethiosulfovibrio peptidovorans DSM
11002]
gi|288570337|gb|EFC91894.1| ATPase AAA-2 domain protein [Dethiosulfovibrio peptidovorans DSM
11002]
Length = 824
Score = 765 bits (1975), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 372/654 (56%), Positives = 505/654 (77%), Gaps = 17/654 (2%)
Query: 9 VGAGVGGGSSGNKM--------PTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
+ G G G S NK P L++ G +LT++AE+ +LDPV+GR +I RV+Q+L R
Sbjct: 143 LSGGEGDGKSSNKQERKDRNRTPILDQLGIDLTEMAEKNELDPVIGRSKEIRRVIQVLSR 202
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNP LIG+PGVGKTAI EGLAQ++ SGD+P++++ K+V L+MG LVAGTKYRGEFE
Sbjct: 203 RTKNNPVLIGDPGVGKTAIVEGLAQKVLSGDIPESLKEKRVFQLNMGNLVAGTKYRGEFE 262
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
ER++KL+ E+K+ ++ILFIDE+HT++GAG AEGAIDAANILKPSLARGE Q +GATTL+
Sbjct: 263 ERMRKLVVELKECRDVILFIDEIHTIVGAGGAEGAIDAANILKPSLARGEFQVVGATTLE 322
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYR+HIEKD ALERRFQPVKV EP++++ I+KGLR+RYE HH++ TD+AL +A +LS
Sbjct: 323 EYRRHIEKDAALERRFQPVKVYEPNLEDAFLIVKGLRDRYESHHRVTITDQALDAAVKLS 382
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
+YI+DRFLPDK IDLIDEA +R RL +LPE ++++KEL +I KEK AV Q FEK
Sbjct: 383 SRYITDRFLPDKGIDLIDEAAARARLDTMELPESLKKMDKELERIRKEKESAVNSQAFEK 442
Query: 301 AGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVS 360
A +LRD E L + + +E +T+ PV+T+ + +VS WTG+PV +++
Sbjct: 443 AAKLRDDENRLSDDLER---RRREWVSRQTKE---VPVLTDESVAQVVSEWTGVPVSQLT 496
Query: 361 TDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 420
+ES RL +ME+ +H+R++GQ+ AV A+S+AIRRAR GLK+P RPI SF+F GPTGVGK+
Sbjct: 497 EEESKRLSRMEDEIHRRLVGQESAVSAVSKAIRRARSGLKDPKRPIGSFLFLGPTGVGKT 556
Query: 421 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 480
E+A++LA + FGSE+A++ LDMSEFMERH VSKLIG+PPGYVG+ GG+LTE +RRRPY+
Sbjct: 557 EMARSLADFLFGSEDALVTLDMSEFMERHEVSKLIGAPPGYVGHESGGKLTETIRRRPYS 616
Query: 481 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGS-SVIEKGGRR 539
V+LFDEIEKA+PDVFN++LQILE+GRLTD +GR VDF+NT++IMTSN+G+ +++++ G
Sbjct: 617 VILFDEIEKANPDVFNVLLQILEEGRLTDGQGRKVDFRNTVVIMTSNIGARNIVKRQG-- 674
Query: 540 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 599
GF D E S ++ + + EE+++ FRPEFLNR+DE +VF L+K ++ I D+MLK
Sbjct: 675 FGFATDNHEGFSDWSSVSKNIDEEVRRAFRPEFLNRIDEQVVFSPLSKEQMLGILDVMLK 734
Query: 600 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKML 653
EV +RL K I L V+ + +E ++E+GY P YGARPLRR I RLLED +A+ +L
Sbjct: 735 EVRERLSEKGIRLTVSTKAKELILEKGYQPQYGARPLRRTIQRLLEDPLADMIL 788
>gi|227547924|ref|ZP_03977973.1| ATP-dependent protease, ATPase subunit, partial [Corynebacterium
lipophiloflavum DSM 44291]
gi|227079998|gb|EEI17961.1| ATP-dependent protease, ATPase subunit [Corynebacterium
lipophiloflavum DSM 44291]
Length = 749
Score = 765 bits (1975), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 379/655 (57%), Positives = 512/655 (78%), Gaps = 17/655 (2%)
Query: 25 LEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLA 84
L+++G NLT A EGKLDPVVGR +IERV+Q+L RRTKNNP LIGEPGVGKTA+ EGLA
Sbjct: 27 LDQFGRNLTAAAREGKLDPVVGRAKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLA 86
Query: 85 QRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVH 144
IA+G+VP+T++ K+V +LD+G LVAG++YRG+FEERLKK+++EI Q +IILFIDE+H
Sbjct: 87 LDIANGNVPETLKDKQVYSLDLGSLVAGSRYRGDFEERLKKVLKEINQRGDIILFIDEIH 146
Query: 145 TLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEP 204
TL+GAGAAEGAIDAA++LKP LARGELQ IGATTLDEYRKHIEKD ALERRFQPV+V EP
Sbjct: 147 TLVGAGAAEGAIDAASLLKPKLARGELQTIGATTLDEYRKHIEKDAALERRFQPVQVDEP 206
Query: 205 SVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRV 264
SV++T+ ILKGLR+RYE HH++ YTD+ALV+AA LS +YI+DRFLPDKA+DL+DEAG+R+
Sbjct: 207 SVEDTVTILKGLRDRYEAHHRVSYTDDALVAAANLSDRYINDRFLPDKAVDLLDEAGARM 266
Query: 265 RLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKE 324
R++ PE RE+++ + ++ KEK A+ QDFEKA LRD E L G+E
Sbjct: 267 RIKRMTAPEGLREVDERIAEVRKEKEAAIDAQDFEKAAGLRDTERKL----------GEE 316
Query: 325 MSKAETE--AGDVGPV--VTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIG 380
+ E + +GD+ + V E I +++ WTGIPV K++ ES RLL ME+ LHKR+IG
Sbjct: 317 RREKEKQWRSGDLEEIAEVGEEQIADVLANWTGIPVFKLTESESSRLLNMEDELHKRIIG 376
Query: 381 QDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRL 440
QDEAV+A+SR+IRR R GLK+P RP SFIF+GP+GVGK+EL+KALA + FG E+++I++
Sbjct: 377 QDEAVRAVSRSIRRTRAGLKDPKRPSGSFIFAGPSGVGKTELSKALAEFLFGDEDSLIQV 436
Query: 441 DMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQ 500
DM EF +R T S+L G+PPGYVGY EGGQLTE VRR+P++VVLFDEIEKAH +++N +LQ
Sbjct: 437 DMGEFHDRFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHKEIYNTLLQ 496
Query: 501 ILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFD-LDYDEKDSSYNRIKSL 559
+LE+G +TD +GR VDFKNT+LI TSN+G+S I K +GF + D+ Y+R+K+
Sbjct: 497 VLEEGHVTDGQGRMVDFKNTVLIFTSNLGTSDISK-AVGLGFTGSTATDADAQYDRMKNK 555
Query: 560 VTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFR 619
V +ELK++FRPEFLNR+DE++VFRQL++ E+ ++ ++M+ V L +D+ +++T++ +
Sbjct: 556 VHDELKKHFRPEFLNRIDEVVVFRQLSQEEIVQMVELMIARVDKNLAAQDMGIELTDKAK 615
Query: 620 ERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDV-DSDGNV 673
+ + G++P GARPLRR I R +ED ++EK+L EI G+ + VDV D DG+V
Sbjct: 616 DLLALRGFDPVLGARPLRRTIQREIEDILSEKILYGEIGAGEIITVDVEDWDGDV 670
>gi|384507453|ref|YP_005684122.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
pseudotuberculosis C231]
gi|384511635|ref|YP_005691213.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
pseudotuberculosis PAT10]
gi|387137283|ref|YP_005693263.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
pseudotuberculosis 42/02-A]
gi|302206878|gb|ADL11220.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
pseudotuberculosis C231]
gi|341825574|gb|AEK93095.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
pseudotuberculosis PAT10]
gi|348607728|gb|AEP71001.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
pseudotuberculosis 42/02-A]
Length = 885
Score = 765 bits (1975), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/658 (56%), Positives = 507/658 (77%), Gaps = 13/658 (1%)
Query: 14 GGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPG 73
G G N + L+++G NLT+ A++GKLDPVVGR+ +IER++Q+L RRTKNNP LIGEPG
Sbjct: 175 GAGDRSNSL-VLDQFGRNLTQAAKDGKLDPVVGREKEIERIMQVLSRRTKNNPVLIGEPG 233
Query: 74 VGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQS 133
VGKTA+ EGLA I +G VP+T++ K++ +LD+G LVAG++YRG+FEERLKK+++EI Q
Sbjct: 234 VGKTAVVEGLALDIVNGKVPETLKDKQLYSLDLGSLVAGSRYRGDFEERLKKVLKEINQR 293
Query: 134 DEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALE 193
+IILFIDE+HTL+GAGAAEGAIDAA++LKP LARGELQ IGATTLDEYRKHIEKD ALE
Sbjct: 294 GDIILFIDEIHTLVGAGAAEGAIDAASLLKPKLARGELQTIGATTLDEYRKHIEKDAALE 353
Query: 194 RRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKA 253
RRFQPV VPEPSV+ TI+ILKGLR+RYE HH++ TD AL +AAQLS +YI+DRFLPDKA
Sbjct: 354 RRFQPVNVPEPSVEMTIEILKGLRDRYEAHHRVSITDGALAAAAQLSDRYINDRFLPDKA 413
Query: 254 IDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKA 313
+DLIDEAG+R+R++ PE R+++ + ++ +EK A+ QDFEKA LRD E L
Sbjct: 414 VDLIDEAGARMRIQRMTAPESIRKVDDRIAEVRREKEAAIDAQDFEKAAGLRDTERKLNE 473
Query: 314 QISALVDKGKEMSKAETEAGDVGPV--VTEVDIQHIVSAWTGIPVEKVSTDESDRLLKME 371
+ + + + +GD+ + V E I ++ WTGIPV K++ +ES RLL+ME
Sbjct: 474 E--------RAEKEKQWRSGDLEEIAEVGEEQIAEVLGNWTGIPVFKLTEEESSRLLRME 525
Query: 372 ETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYF 431
+ LHKR+IGQ++AVKA+SRAIRR R GLK+P RP SFIF+GP+GVGK+EL+KALA + F
Sbjct: 526 DELHKRIIGQEDAVKAVSRAIRRTRAGLKDPRRPSGSFIFAGPSGVGKTELSKALANFLF 585
Query: 432 GSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAH 491
G ++A+I++DM EF +R T S+L G+PPGYVGY EGGQLTE VRR+P++VVLFDEIEKAH
Sbjct: 586 GDDDALIQIDMGEFHDRFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAH 645
Query: 492 PDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGF-DLDYDEKD 550
+++N +LQ+LEDGRLTD +GR VDFKNT+LI TSN+G+ I K +GF + + D
Sbjct: 646 KEIYNTLLQVLEDGRLTDGQGRVVDFKNTVLIFTSNLGTQDISK-AVGMGFSSVGEHDAD 704
Query: 551 SSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDI 610
Y+R+K V +ELK++FRPEFLNR+DE++VF QLT+ ++ ++ D+++ V L KD+
Sbjct: 705 GQYSRMKQKVNDELKKHFRPEFLNRIDEVVVFHQLTQDQIVQMVDLLVSRVAKALAQKDM 764
Query: 611 ELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVD 668
+++TE+ + + G++P GARPLRR I R +ED+++EK+L E+ G+ V VDV+
Sbjct: 765 GIELTEKAKSLLARRGFDPVLGARPLRRTIQREIEDALSEKILFGEVGAGEIVTVDVE 822
>gi|429731906|ref|ZP_19266529.1| ATPase family protein [Corynebacterium durum F0235]
gi|429144702|gb|EKX87811.1| ATPase family protein [Corynebacterium durum F0235]
Length = 871
Score = 765 bits (1975), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/677 (56%), Positives = 517/677 (76%), Gaps = 25/677 (3%)
Query: 6 TEAVGAGV--GG------GSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQI 57
++AVGAG GG G N + L+++G NLT+ A +GKLDPVVGR+ +IERV+Q+
Sbjct: 162 SDAVGAGASPGGRVQSSVGERSNSL-VLDQFGRNLTQAARDGKLDPVVGREKEIERVMQV 220
Query: 58 LGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRG 117
L RRTKNNP LIGEPGVGKTA+ EGLA I +G VP+T++ K++ +LD+G LVAG++YRG
Sbjct: 221 LSRRTKNNPVLIGEPGVGKTAVVEGLALDIVNGKVPETLKDKQLYSLDLGSLVAGSRYRG 280
Query: 118 EFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGAT 177
+FEERLKK+++EI Q +IILFIDE+HTL+GAGAAEGAIDAA++LKP LARGELQ IGAT
Sbjct: 281 DFEERLKKVLKEINQRGDIILFIDEIHTLVGAGAAEGAIDAASLLKPKLARGELQTIGAT 340
Query: 178 TLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAA 237
TLDEYRKHIEKD ALERRFQPV+VPEPSV+ TI ILKGLR+RYE HH++ TD AL +AA
Sbjct: 341 TLDEYRKHIEKDAALERRFQPVQVPEPSVELTIDILKGLRDRYEAHHRVSITDGALAAAA 400
Query: 238 QLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQD 297
LS +YI+DR+LPDKA+DLIDEAG+R+R++ P RE+++ + + +EK A+ QD
Sbjct: 401 NLSDRYINDRYLPDKAVDLIDEAGARMRIKRMTAPAGLREVDERIAAVRREKEAAIDAQD 460
Query: 298 FEKAGELRDREMDLKAQISALVDKGKEMSKAETE--AGDVGPV--VTEVDIQHIVSAWTG 353
FEKA LRD+E L G+E S+ E + AGD+ + V E I ++ WTG
Sbjct: 461 FEKAAGLRDQERRL----------GEERSEKEKQWRAGDLEEIAEVGEEQIAEVLGTWTG 510
Query: 354 IPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSG 413
IPV K++ +ES RLL MEE LHKR+IGQD+AVK++SRAIRR R GLK+P RP SFIF+G
Sbjct: 511 IPVFKLTEEESSRLLHMEEELHKRIIGQDDAVKSVSRAIRRTRAGLKDPRRPSGSFIFAG 570
Query: 414 PTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEA 473
P+GVGK+EL+KALA + FG ++A+I++DM EF +R T S+L G+PPGYVGY EGGQLTE
Sbjct: 571 PSGVGKTELSKALAEFLFGEDDALIQIDMGEFHDRFTASRLFGAPPGYVGYEEGGQLTEK 630
Query: 474 VRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVI 533
VRR+P++VVLFDEIEKAH +++N +LQ+LEDGRLTD +GR VDFKNT+LI TSN+G+ I
Sbjct: 631 VRRKPFSVVLFDEIEKAHKEIYNTLLQVLEDGRLTDGQGRVVDFKNTVLIFTSNLGTQDI 690
Query: 534 EKGGRRIGF-DLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKE 592
K +GF + + + Y R+K V +ELK++FRPEFLNR+D+++VF QLT+ E+ +
Sbjct: 691 SK-AVGMGFSSVGETDAEGQYERMKQKVNDELKKHFRPEFLNRIDDIVVFHQLTQEEIIK 749
Query: 593 IADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKM 652
+ D+++ V LK KD++L++T+ ++ + + G++P GARPLRR I R +ED ++EK+
Sbjct: 750 MVDLLVGRVSKALKAKDMDLELTDNAKKLLAKRGFDPVLGARPLRRTIQREIEDVLSEKI 809
Query: 653 LAREIKEGDSVIVDVDS 669
L E+ G+ + VDVD+
Sbjct: 810 LFGEVGAGEIITVDVDN 826
>gi|358446330|ref|ZP_09156877.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
casei UCMA 3821]
gi|356607742|emb|CCE55201.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
casei UCMA 3821]
Length = 905
Score = 764 bits (1974), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 379/683 (55%), Positives = 522/683 (76%), Gaps = 26/683 (3%)
Query: 3 GESTEA----VGAGVGGGSSGNKMP----------TLEEYGTNLTKLAEEGKLDPVVGRQ 48
GE EA VGAG G + G + P L+++G NLT+ A++GKLDPVVGR+
Sbjct: 150 GEKPEAGPGPVGAGTGPQNPGRQGPGNQGERSNSLVLDQFGRNLTQAAKDGKLDPVVGRE 209
Query: 49 PQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGL 108
+IER++Q+L RRTKNNP LIGEPGVGKTA+ EGLA I +G VP+T++ K+V +LD+G
Sbjct: 210 SEIERIMQVLSRRTKNNPVLIGEPGVGKTAVVEGLALDIVNGKVPETLKDKQVYSLDLGS 269
Query: 109 LVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLAR 168
LVAG++YRG+FEERLKK+++EI Q +IILFIDE+HTL+GAGAAEGAIDAA++LKP LAR
Sbjct: 270 LVAGSRYRGDFEERLKKVLKEINQRGDIILFIDEIHTLVGAGAAEGAIDAASLLKPKLAR 329
Query: 169 GELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRY 228
GELQ IGATTLDEYRKHIEKD ALERRFQPVKV EPS+++TI IL+GLR++YE HH++ Y
Sbjct: 330 GELQTIGATTLDEYRKHIEKDAALERRFQPVKVDEPSMEDTITILRGLRDKYEAHHRVSY 389
Query: 229 TDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKE 288
TD+AL +AA LS +YI+DRFLPDKA+DL+DEAG+R+R++ P+ R+++ + ++ KE
Sbjct: 390 TDDALKAAASLSDRYINDRFLPDKAVDLLDEAGARMRIKRMTAPKGIRDVDDRIAEVRKE 449
Query: 289 KNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPV--VTEVDIQH 346
K A+ QDFEKA LRD E L + SA + + +GD+ + ++E I
Sbjct: 450 KESAIDAQDFEKAAGLRDTERKLHEERSA--------KEKQWRSGDLEEIAEISEEQIAE 501
Query: 347 IVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPI 406
+++ WTGIPV K++ ES RLL ME+ LHKR+IGQ+EAVKA+SRAIRR R GLK+P RP
Sbjct: 502 VLAHWTGIPVLKLTEKESSRLLNMEDELHKRIIGQNEAVKAVSRAIRRTRAGLKDPRRPS 561
Query: 407 ASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTE 466
SFIF+GP+GVGK+EL+KALA + FGS++ +I++DM EF +R T S+L G+PPGYVGY E
Sbjct: 562 GSFIFAGPSGVGKTELSKALANFLFGSDDDLIQIDMGEFHDRFTASRLFGAPPGYVGYEE 621
Query: 467 GGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTS 526
GGQLTE VRR+P++VVLFDEIEKAH +++N +LQ+LEDGRLTD +GR VDFKNT+LI TS
Sbjct: 622 GGQLTEKVRRKPFSVVLFDEIEKAHKEIYNTLLQVLEDGRLTDGQGRVVDFKNTVLIFTS 681
Query: 527 NVGSSVIEKGGRRIGF-DLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQL 585
N+G+ I K +GF + + D+ Y+R+K+ V +ELK++FRPEFLNR+DE++VF QL
Sbjct: 682 NLGTQDISK-AVGLGFTSANETDSDAQYDRMKNKVNDELKKHFRPEFLNRIDEIVVFHQL 740
Query: 586 TKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLE 645
T+ E+ ++ ++++ V +L +D+ +++T++ ++ + + G++P GARPLRR I R +E
Sbjct: 741 TRDEIVQMVELLIGRVEVQLAERDMGIELTQKAKDLLAKRGFDPVLGARPLRRTIQREIE 800
Query: 646 DSMAEKMLAREIKEGDSVIVDVD 668
D ++EK+L EI G+ + VDV+
Sbjct: 801 DQLSEKILYGEIGAGEIISVDVE 823
>gi|119025591|ref|YP_909436.1| ATP-dependent Clp protease ATP-binding subunit [Bifidobacterium
adolescentis ATCC 15703]
gi|118765175|dbj|BAF39354.1| probable ATP-dependent Clp protease ATP-binding subunit
[Bifidobacterium adolescentis ATCC 15703]
Length = 864
Score = 764 bits (1974), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/647 (57%), Positives = 513/647 (79%), Gaps = 8/647 (1%)
Query: 25 LEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLA 84
L+++G NLT A GKLDPV+GR +IERV+ +L RRTKNNP LIGEPGVGKTA+ EGLA
Sbjct: 175 LDQFGRNLTAEAAAGKLDPVIGRSNEIERVMVVLSRRTKNNPVLIGEPGVGKTAVVEGLA 234
Query: 85 QRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVH 144
Q+I +GDVP+T++GK+V +LD+G +VAG++YRG+FEERLKK+++EIK +I+LFIDE+H
Sbjct: 235 QKINAGDVPETLKGKQVYSLDLGSMVAGSRYRGDFEERLKKVLKEIKTRGDIVLFIDEIH 294
Query: 145 TLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEP 204
T++GAG+A+GA+ A+++LKP LARGELQ IGATT DEYRK+IEKD ALERRFQP++V EP
Sbjct: 295 TIVGAGSADGALGASDMLKPMLARGELQTIGATTTDEYRKYIEKDAALERRFQPIQVHEP 354
Query: 205 SVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRV 264
++ ETI+ILKGLRERYE HH + TD AL +AA+LS +YI DR LPDKAIDLIDEAG+R+
Sbjct: 355 TIAETIEILKGLRERYENHHHVTITDGALQAAAELSSRYIQDRHLPDKAIDLIDEAGARL 414
Query: 265 RLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKE 324
R+R P E +EL+ + ++ +EK++A++ QDFEKA ELRD++ ++++ K KE
Sbjct: 415 RIRRLTAPPELKELDAKAAKLAEEKDQAIKDQDFEKAAELRDKQEKIESE-----RKEKE 469
Query: 325 MSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEA 384
+ E E+ DV VV E I ++S TGIPV K++ ES +L+ ME LHKR+IGQDEA
Sbjct: 470 SAWREGES-DVKMVVDEDVIAEVISQTTGIPVFKLTQAESKKLMGMESELHKRIIGQDEA 528
Query: 385 VKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSE 444
V A+SR+IRRARVGLK+P RP SFIF+GPTGVGK+ELAKALA + F E+A+IR+DMSE
Sbjct: 529 VSALSRSIRRARVGLKDPKRPAGSFIFAGPTGVGKTELAKALAEFLFDDEDALIRVDMSE 588
Query: 445 FMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILED 504
F E++ S+L G+PPGYVGY EGG+LTE VRR+P++VVLFDEIEKAHPD+FN +LQ+L+D
Sbjct: 589 FSEKYAASRLFGAPPGYVGYEEGGELTEKVRRKPFSVVLFDEIEKAHPDIFNTLLQVLDD 648
Query: 505 GRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEEL 564
G LTD +GR VDFKNT++I+T+N+G+ I K GF+L + +SSY R+K V+ EL
Sbjct: 649 GHLTDGQGRKVDFKNTIIILTTNLGTRDIAKAA-NTGFNLGTN-TESSYQRMKEQVSAEL 706
Query: 565 KQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVE 624
KQ FRPEFLNRLD++IVF+QLT+ +V++I D+ +K++ DRL + + L++T+ ++ + +
Sbjct: 707 KQQFRPEFLNRLDDIIVFKQLTEPQVRQIVDLDVKQLNDRLFDRHMSLELTDAAKDLLAQ 766
Query: 625 EGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDG 671
+G++P GARPLRR I R +ED+++EK+L ++++G V VD + +G
Sbjct: 767 KGFDPLLGARPLRRVIQRDIEDAISEKILMGDLEDGQRVRVDAEGEG 813
>gi|358063547|ref|ZP_09150156.1| hypothetical protein HMPREF9473_02218 [Clostridium hathewayi
WAL-18680]
gi|356698173|gb|EHI59724.1| hypothetical protein HMPREF9473_02218 [Clostridium hathewayi
WAL-18680]
Length = 819
Score = 764 bits (1974), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/642 (59%), Positives = 499/642 (77%), Gaps = 9/642 (1%)
Query: 23 PTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEG 82
PTL+ Y NLT+LA EGKLDPV+GR+ +I+R++QIL RRTKNNPCLIGEPGVGKTA+ EG
Sbjct: 167 PTLDSYSRNLTELAREGKLDPVIGREQEIQRLIQILSRRTKNNPCLIGEPGVGKTAVVEG 226
Query: 83 LAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDE 142
LAQ I G+VP+TI K+V+TLD+ +VAG+KYRGEFEER+KK++ E+ + E++LFIDE
Sbjct: 227 LAQLIIEGNVPETIASKRVVTLDLSGMVAGSKYRGEFEERIKKVLAEVMEDGEVLLFIDE 286
Query: 143 VHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVP 202
+HT+IGAG AEGAIDA+NILKPSLARGE+Q IGATT++EYRK+IEKD ALERRFQPV V
Sbjct: 287 IHTIIGAGGAEGAIDASNILKPSLARGEIQLIGATTIEEYRKYIEKDSALERRFQPVTVE 346
Query: 203 EPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGS 262
EPS DE ILKGLR RYE HH ++ TDEAL +A +LS +YI+DRFLPDKAIDLIDEA S
Sbjct: 347 EPSEDEAFAILKGLRGRYEEHHHVKITDEALKAAVKLSARYINDRFLPDKAIDLIDEASS 406
Query: 263 RVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKG 322
++RL PEE + LE+++ + ++K EA++ + +EKAG+++ ++ + +I L DK
Sbjct: 407 KLRLTSFVEPEEIKSLEQDIVNLERQKEEAIKAEAYEKAGDIKKKQAKKQEKIEKLRDKW 466
Query: 323 KEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQD 382
++ VV+E +I +VS WT IPV K+ +ES+RL ++E LH+RVIGQ+
Sbjct: 467 QKDKTTRK------LVVSENEIADVVSGWTKIPVRKLEEEESERLRQLEGILHERVIGQE 520
Query: 383 EAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDM 442
EAV A++RAIRR RVGLK+P RPI SF+F GPTGVGK+EL KALA FG+E A+IR+DM
Sbjct: 521 EAVSAVARAIRRGRVGLKDPKRPIGSFLFLGPTGVGKTELCKALAEAMFGTENALIRVDM 580
Query: 443 SEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQIL 502
SE+ME+H+VSK+IGSPPGYVGY EGGQL+E VRR PY+V+LFDEIEKAHPDVFN++LQ+L
Sbjct: 581 SEYMEKHSVSKMIGSPPGYVGYEEGGQLSEKVRRNPYSVILFDEIEKAHPDVFNILLQVL 640
Query: 503 EDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTE 562
+DG +TD++GR +DFKNT+LIMTSN G+ I +R+GF D+K+ Y +K V E
Sbjct: 641 DDGHITDAQGRKIDFKNTILIMTSNAGAENI-ISPKRLGF-ASVDDKNERYRFMKERVME 698
Query: 563 ELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTK-DIELQVTERFRER 621
E+K+ F+PEFLNR+DE+IVF LTK +K+I IML+ + R K + DI +QVT+ +E
Sbjct: 699 EVKRLFKPEFLNRIDEIIVFHPLTKENMKDIVSIMLEVIRKRTKQQMDIAIQVTDDGKEF 758
Query: 622 VVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSV 663
++E+GY+ YGARPLRR I +ED +AEK+L EI GD V
Sbjct: 759 LIEKGYDEKYGARPLRRTIQSQVEDRLAEKILDGEIHSGDEV 800
>gi|260906427|ref|ZP_05914749.1| ATPase [Brevibacterium linens BL2]
Length = 850
Score = 764 bits (1974), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/667 (56%), Positives = 504/667 (75%), Gaps = 8/667 (1%)
Query: 25 LEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLA 84
L+++GTNLT A EG LDPV+GR Q++RV+QIL RRTKNNP LIGEPGVGKTA+ EGLA
Sbjct: 167 LDQFGTNLTAAAREGTLDPVIGRHEQMQRVMQILSRRTKNNPVLIGEPGVGKTAVVEGLA 226
Query: 85 QRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVH 144
I +G+VP+ +E K++ TLD+G LVAG++YRG+FEERLKK+++EI+ +IILFIDE+H
Sbjct: 227 LAIVNGEVPEILEDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEIRTRGDIILFIDEIH 286
Query: 145 TLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEP 204
TL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEYRKHIEKD ALERRFQP++VPEP
Sbjct: 287 TLVGAGAAEGAIDAASILKPMLARGELQTIGATTLDEYRKHIEKDAALERRFQPIQVPEP 346
Query: 205 SVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRV 264
S+ +I+ILKGLR++YE HHK+ T+ AL +A +S +Y++DR+LPDKAIDLIDEAG+++
Sbjct: 347 SLAHSIEILKGLRDKYEAHHKVTITEGALSAAVNMSDRYVNDRYLPDKAIDLIDEAGAKL 406
Query: 265 RLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKE 324
R+ +P+E R+LE+++ + K A+ QDFE A RD EM L+ DK ++
Sbjct: 407 RISRLSVPQEIRDLEEKILEARHRKEAAIDAQDFELAASERDSEMKLQQ------DKDEQ 460
Query: 325 MSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEA 384
D VV I +++A TGIP+ K++ +ES RLL+ME+ LHKR+IGQD+A
Sbjct: 461 TEAWRKSGKDTSAVVDAELIAEVLAAATGIPIFKLTEEESSRLLRMEDELHKRIIGQDDA 520
Query: 385 VKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSE 444
VK+ISRAIRR R GLK+P RP SFIF+GPTGVGK+ELAKAL+ + FG E+++I LDMSE
Sbjct: 521 VKSISRAIRRTRAGLKDPKRPSGSFIFAGPTGVGKTELAKALSEFLFGDEDSLISLDMSE 580
Query: 445 FMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILED 504
+ E+HTVS+L GSPPGYVGY EGGQLTE VRR+P++VVLFDE+EKAH D+FN +LQILED
Sbjct: 581 YSEKHTVSRLFGSPPGYVGYEEGGQLTEKVRRKPFSVVLFDEVEKAHSDIFNSLLQILED 640
Query: 505 GRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEEL 564
GRLTDS+GR VDFKNT++IMT+N+G+ I G ++GF ++ + +++Y R+K V EEL
Sbjct: 641 GRLTDSQGREVDFKNTIIIMTTNLGTRDI-SSGLQLGFQVEGN-TNNNYERMKQKVNEEL 698
Query: 565 KQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVE 624
KQ+FRPEFLNR+D+ IVF QL K E+ +I D L + RL + ++++V++ + + +
Sbjct: 699 KQHFRPEFLNRVDDTIVFPQLNKEEILQIVDQFLARLDARLADQGMKVEVSDAAKSLLAD 758
Query: 625 EGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNGSSGAPE 684
GY+P GARPLRR I +ED ++EK+L +EI G ++ VDV +G E
Sbjct: 759 RGYDPVLGARPLRRTIQLEIEDHLSEKILFKEIGSGQTIKVDVKGEGKEAEFTFEGVETE 818
Query: 685 SLADPLP 691
S+A P
Sbjct: 819 SIAASGP 825
>gi|324998065|ref|ZP_08119177.1| putative ATP-dependent Clp protease [Pseudonocardia sp. P1]
Length = 848
Score = 764 bits (1974), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 376/663 (56%), Positives = 513/663 (77%), Gaps = 16/663 (2%)
Query: 11 AGVGGGSSGNKMPTL--EEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCL 68
+G GG G +L +++G NLT+ A EGKLDPV+GR+ +IER++Q+L RRTKNNP L
Sbjct: 153 SGTGGRGEGTPSSSLVLDQFGRNLTQQAREGKLDPVIGREKEIERIMQVLSRRTKNNPVL 212
Query: 69 IGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLME 128
IGE GVGKTA EGL Q I G+VP+T++ K++ TLD+G LVAG++YRG+FEERLKK+++
Sbjct: 213 IGEAGVGKTAAVEGLGQAIVKGEVPETLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLK 272
Query: 129 EIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEK 188
EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEYRK++EK
Sbjct: 273 EIRTRGDIILFIDEIHTLVGAGAAEGAIDAASILKPMLARGELQTIGATTLDEYRKYVEK 332
Query: 189 DPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRF 248
DPALERRFQP++V EPSV TI+ILKGLR+RYE HH++ TD+AL SAA L+ +YI+DRF
Sbjct: 333 DPALERRFQPIQVSEPSVTHTIEILKGLRDRYEAHHRVTITDDALSSAATLADRYINDRF 392
Query: 249 LPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDRE 308
LPDKAIDLIDEAG+R+R+R P + RE ++++ + ++K A+ QDFE+A LRD+E
Sbjct: 393 LPDKAIDLIDEAGARMRIRRMTAPPDLREFDEKIANVRRDKESAIDAQDFERAAHLRDQE 452
Query: 309 MDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKVSTDESD 365
L + K + + ++GD+ VV EVD I ++ WTGIPV K++ +E+
Sbjct: 453 KTLLGE--------KAEREKQWKSGDL-DVVAEVDSEQIAEVLGNWTGIPVFKLTEEETT 503
Query: 366 RLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKA 425
RLL+ME+ LHKR+IGQ++AVK++S+AIRR R GLK+P RP SFIF+GP+GVGK+EL+KA
Sbjct: 504 RLLRMEDELHKRIIGQEDAVKSVSQAIRRTRAGLKDPKRPSGSFIFAGPSGVGKTELSKA 563
Query: 426 LAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFD 485
LA + FG ++A+I++DM EF +R+T S+L G+PPGYVGY EGGQLTE VRR+P++VVLFD
Sbjct: 564 LANFLFGEDDALIQIDMGEFHDRYTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVVLFD 623
Query: 486 EIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLD 545
EIEKAH +++N +LQ+LEDGRLTD +GR VDFKNT+LI TSN+G+ I K +GF
Sbjct: 624 EIEKAHQEIYNTLLQVLEDGRLTDGQGRVVDFKNTVLIFTSNLGTQDISK-AVGLGFSSG 682
Query: 546 YDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRL 605
DE S+Y R+K+ V +ELK++FRPEFLNR+D++IVF QL + ++ E+ D+M+ V +L
Sbjct: 683 NDEA-SNYERMKTKVNDELKKHFRPEFLNRIDDIIVFHQLNQDQIIEMVDLMIGRVEKQL 741
Query: 606 KTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIV 665
KD+ +++TER ++ + G++P GARPLRR I R +ED ++EK+L E++ G V+V
Sbjct: 742 ANKDMAIELTERSKKLLARRGFDPVLGARPLRRTIQREIEDQLSEKILFGELEGGQIVLV 801
Query: 666 DVD 668
DV+
Sbjct: 802 DVE 804
>gi|383314945|ref|YP_005375800.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
pseudotuberculosis P54B96]
gi|384509550|ref|YP_005686218.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
pseudotuberculosis I19]
gi|385808249|ref|YP_005844646.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
pseudotuberculosis 267]
gi|308277132|gb|ADO27031.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
pseudotuberculosis I19]
gi|380870446|gb|AFF22920.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
pseudotuberculosis P54B96]
gi|383805642|gb|AFH52721.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
pseudotuberculosis 267]
Length = 885
Score = 764 bits (1974), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/658 (56%), Positives = 507/658 (77%), Gaps = 13/658 (1%)
Query: 14 GGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPG 73
G G N + L+++G NLT+ A++GKLDPVVGR+ +IER++Q+L RRTKNNP LIGEPG
Sbjct: 175 GAGDRSNSL-VLDQFGRNLTQAAKDGKLDPVVGREKEIERIMQVLSRRTKNNPVLIGEPG 233
Query: 74 VGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQS 133
VGKTA+ EGLA I +G VP+T++ K++ +LD+G LVAG++YRG+FEERLKK+++EI Q
Sbjct: 234 VGKTAVVEGLALDIVNGKVPETLKDKQLYSLDLGSLVAGSRYRGDFEERLKKVLKEINQR 293
Query: 134 DEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALE 193
+IILFIDE+HTL+GAGAAEGAIDAA++LKP LARGELQ IGATTLDEYRKHIEKD ALE
Sbjct: 294 GDIILFIDEIHTLVGAGAAEGAIDAASLLKPKLARGELQTIGATTLDEYRKHIEKDAALE 353
Query: 194 RRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKA 253
RRFQPV VPEPSV+ TI+ILKGLR+RYE HH++ TD AL +AAQLS +YI+DRFLPDKA
Sbjct: 354 RRFQPVNVPEPSVEMTIEILKGLRDRYEAHHRVSITDGALAAAAQLSDRYINDRFLPDKA 413
Query: 254 IDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKA 313
+DLIDEAG+R+R++ PE R+++ + ++ +EK A+ QDFEKA LRD E L
Sbjct: 414 VDLIDEAGARMRIQRMTAPESIRKVDDRIAEVRREKEAAIDAQDFEKAAGLRDTERKLNE 473
Query: 314 QISALVDKGKEMSKAETEAGDVGPV--VTEVDIQHIVSAWTGIPVEKVSTDESDRLLKME 371
+ + + + +GD+ + V E I ++ WTGIPV K++ +ES RLL+ME
Sbjct: 474 E--------RAEKEKQWRSGDLEEIAEVGEEQIAEVLGNWTGIPVFKLTEEESSRLLRME 525
Query: 372 ETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYF 431
+ LHKR+IGQ++AVKA+SRAIRR R GLK+P RP SFIF+GP+GVGK+EL+KALA + F
Sbjct: 526 DELHKRIIGQEDAVKAVSRAIRRTRAGLKDPRRPSGSFIFAGPSGVGKTELSKALANFLF 585
Query: 432 GSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAH 491
G ++A+I++DM EF +R T S+L G+PPGYVGY EGGQLTE VRR+P++VVLFDEIEKAH
Sbjct: 586 GDDDALIQIDMGEFHDRFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAH 645
Query: 492 PDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGF-DLDYDEKD 550
+++N +LQ+LEDGRLTD +GR VDFKNT+LI TSN+G+ I K +GF + + D
Sbjct: 646 KEIYNTLLQVLEDGRLTDGQGRVVDFKNTVLIFTSNLGTQDISK-AVGMGFSSVGEHDAD 704
Query: 551 SSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDI 610
Y+R+K V +ELK++FRPEFLNR+DE++VF QLT+ ++ ++ D+++ V L KD+
Sbjct: 705 GQYSRMKQKVNDELKKHFRPEFLNRIDEVVVFHQLTQDQIVQMVDLLVSRVAKALAQKDM 764
Query: 611 ELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVD 668
+++TE+ + + G++P GARPLRR I R +ED+++EK+L E+ G+ V VDV+
Sbjct: 765 GIELTEKAKSLLARRGFDPVLGARPLRRTIQREIEDALSEKILFGEVGAGEIVTVDVE 822
>gi|400535256|ref|ZP_10798793.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium
colombiense CECT 3035]
gi|400331614|gb|EJO89110.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium
colombiense CECT 3035]
Length = 848
Score = 764 bits (1973), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/639 (58%), Positives = 498/639 (77%), Gaps = 15/639 (2%)
Query: 25 LEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLA 84
L+++G NLT A EGKLDPV+GR+ +IERV+Q+L RRTKNNP LIGEPGVGKTA+ EGLA
Sbjct: 171 LDQFGRNLTAAAMEGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLA 230
Query: 85 QRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVH 144
Q I G VP+T++ K++ TLD+G LVAG++YRG+FEERLKK+++EI +IILFIDE+H
Sbjct: 231 QAIVHGQVPETLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDELH 290
Query: 145 TLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEP 204
TL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEYRK+IEKD ALERRFQPV+V EP
Sbjct: 291 TLVGAGAAEGAIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEP 350
Query: 205 SVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRV 264
+V+ TI+ILKGLR+RYE HH++ TD A+V+AA L+ +YI+DRFLPDKAIDLIDEAG+R+
Sbjct: 351 TVEHTIEILKGLRDRYEAHHRVSITDGAMVAAATLADRYINDRFLPDKAIDLIDEAGARM 410
Query: 265 RLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKE 324
R+R P + RE ++++ + +EK A+ QDFEKA LRDRE L Q +
Sbjct: 411 RIRRMTAPPDLREFDEKIAEARREKESAIDAQDFEKAASLRDREKQLVGQ--------RA 462
Query: 325 MSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQ 381
+ + +GD+ VV EVD I ++ WTGIPV K++ E+ RLL+ME+ LHKR+IGQ
Sbjct: 463 EREKQWRSGDL-DVVAEVDDEQIAEVLGNWTGIPVFKLTEAETTRLLRMEDELHKRIIGQ 521
Query: 382 DEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLD 441
++AVKA+S+AIRR R GLK+P RP SFIF+GP+GVGK+EL+KALA + FG ++A+I++D
Sbjct: 522 EDAVKAVSKAIRRTRAGLKDPKRPSGSFIFAGPSGVGKTELSKALANFLFGDDDALIQID 581
Query: 442 MSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQI 501
M EF +R T S+L G+PPGYVGY EGGQLTE VRR+P++VVLFDEIEKAH +++N +LQ+
Sbjct: 582 MGEFHDRFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNSLLQV 641
Query: 502 LEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVT 561
LEDGRLTD +GRTVDFKNT+LI TSN+G+S I K +G +++Y R+K V
Sbjct: 642 LEDGRLTDGQGRTVDFKNTVLIFTSNLGTSDISKP---VGLGFTQGGGENNYERMKQKVN 698
Query: 562 EELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRER 621
+ELK++FRPEFLNR+D++IVF QLTK E+ + D+M+ V +LK+KD+ L++T++ +
Sbjct: 699 DELKKHFRPEFLNRIDDIIVFHQLTKDEIIRMVDLMINRVATQLKSKDMALELTDKAKAL 758
Query: 622 VVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEG 660
+ + G++P GARPLRR I R +ED ++EK+L E+ G
Sbjct: 759 LAKRGFDPVLGARPLRRTIQREIEDQLSEKILFEEVGPG 797
>gi|305680627|ref|ZP_07403435.1| ATP-dependent Clp protease ATP-binding subunit ClpC
[Corynebacterium matruchotii ATCC 14266]
gi|305660158|gb|EFM49657.1| ATP-dependent Clp protease ATP-binding subunit ClpC
[Corynebacterium matruchotii ATCC 14266]
Length = 890
Score = 764 bits (1973), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/669 (56%), Positives = 510/669 (76%), Gaps = 9/669 (1%)
Query: 25 LEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLA 84
L+++G NLT+ A+EGKLDPVVGR+ +IER++Q+L RRTKNNP LIGEPGVGKTA+ EGLA
Sbjct: 188 LDQFGRNLTQAAKEGKLDPVVGREQEIERIMQVLSRRTKNNPVLIGEPGVGKTAVVEGLA 247
Query: 85 QRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVH 144
I +G VP+T++ K+V +LD+G LVAG++YRG+FEERLKK+++EI Q +IILFIDE+H
Sbjct: 248 LDIVNGKVPETLKDKQVYSLDLGSLVAGSRYRGDFEERLKKVLKEINQRGDIILFIDEIH 307
Query: 145 TLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEP 204
TL+GAGAAEGAIDAA++LKP LARGELQ IGATTLDEYRKHIEKD ALERRFQPV+VPEP
Sbjct: 308 TLVGAGAAEGAIDAASLLKPKLARGELQTIGATTLDEYRKHIEKDAALERRFQPVQVPEP 367
Query: 205 SVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRV 264
SV+ TI ILKGLR+RYE HH++ TD AL +AA LS +YI+DRFLPDKA+DLIDEAG+R+
Sbjct: 368 SVEMTINILKGLRDRYEAHHRVSITDGALTAAANLSDRYINDRFLPDKAVDLIDEAGARM 427
Query: 265 RLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKE 324
R++ PE RE+++ + ++ ++K A+ QDFEKA LRD+E L + + KE
Sbjct: 428 RIKRMTAPEGIREMDERITKVRRQKEAAIDAQDFEKAAGLRDQERQLTEE-----RREKE 482
Query: 325 MSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEA 384
E D+ V E I +++ WTGIPV K++ +ES RLL ME+ LHKR+IGQ++A
Sbjct: 483 KQWRAGELDDIAEVGEE-QIAEVLAHWTGIPVFKLTEEESSRLLNMEDELHKRIIGQEDA 541
Query: 385 VKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSE 444
VKA+SRAIRR R GLK+P RP SFIF+GP+GVGK+EL+KALA + FG ++A+I++DM E
Sbjct: 542 VKAVSRAIRRTRAGLKDPRRPSGSFIFAGPSGVGKTELSKALANFLFGEDDALIQIDMGE 601
Query: 445 FMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILED 504
F +R T S+L G+PPGYVGY EGGQLTE VRR+P++VVLFDEIEKAH +++N +LQ+LED
Sbjct: 602 FHDRFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHKEIYNTLLQVLED 661
Query: 505 GRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFD-LDYDEKDSSYNRIKSLVTEE 563
GRLTD +GR VDFKNT+LI TSN+G+ I K +GF + + D Y R+K+ V +E
Sbjct: 662 GRLTDGQGRIVDFKNTVLIFTSNLGTQDISK-AVGMGFSAVGEHDADGQYERMKNKVNDE 720
Query: 564 LKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVV 623
LK++FRPEFLNR+D+++VF QLTK ++ E+ D+++ V L KD+ +++TE+ + +
Sbjct: 721 LKKHFRPEFLNRIDDIVVFHQLTKEQIVEMVDLLVGRVEKALAAKDMGIELTEQAKNLLA 780
Query: 624 EEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDS-DGNVTVLNGSSGA 682
G++P GARPLRR I R +ED ++EK+L E+ G+ V VDV+ DG+ + ++
Sbjct: 781 ARGFDPVLGARPLRRTIQREIEDVLSEKILFGEVGAGEIVTVDVEGWDGDAKHNDKATFV 840
Query: 683 PESLADPLP 691
PLP
Sbjct: 841 FTPRPKPLP 849
>gi|337291601|ref|YP_004630622.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
ulcerans BR-AD22]
gi|334699907|gb|AEG84703.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
ulcerans BR-AD22]
Length = 885
Score = 764 bits (1973), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 379/682 (55%), Positives = 514/682 (75%), Gaps = 14/682 (2%)
Query: 14 GGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPG 73
G G N + L+++G NLT+ A++GKLDPVVGR+ +IER++Q+L RRTKNNP LIGEPG
Sbjct: 175 GAGDRSNSL-VLDQFGRNLTQAAKDGKLDPVVGREKEIERIMQVLSRRTKNNPVLIGEPG 233
Query: 74 VGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQS 133
VGKTA+ EGLA I +G VP+T++ K++ +LD+G LVAG++YRG+FEERLKK+++EI Q
Sbjct: 234 VGKTAVVEGLALDIVNGKVPETLKDKQLYSLDLGSLVAGSRYRGDFEERLKKVLKEINQR 293
Query: 134 DEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALE 193
+IILFIDE+HTL+GAGAAEGAIDAA++LKP LARGELQ IGATTLDEYRKHIEKD ALE
Sbjct: 294 GDIILFIDEIHTLVGAGAAEGAIDAASLLKPKLARGELQTIGATTLDEYRKHIEKDAALE 353
Query: 194 RRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKA 253
RRFQPV VPEPSV+ TI+ILKGLR+RYE HH++ TD AL +AAQLS +YI+DRFLPDKA
Sbjct: 354 RRFQPVNVPEPSVEMTIEILKGLRDRYEAHHRVSITDGALAAAAQLSDRYINDRFLPDKA 413
Query: 254 IDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKA 313
+DLIDEAG+R+R++ PE R+++ + ++ +EK A+ QDFEKA LRD E L
Sbjct: 414 VDLIDEAGARMRIQRMTAPESIRKVDDRIAEVRREKEAAIDAQDFEKAAGLRDTERKLNE 473
Query: 314 QISALVDKGKEMSKAETEAGDVGPV--VTEVDIQHIVSAWTGIPVEKVSTDESDRLLKME 371
+ + + + +GD+ + V E I ++ WTGIPV K++ +ES RLL+ME
Sbjct: 474 E--------RAEKEKQWRSGDLEEIAEVGEEQIAEVLGNWTGIPVFKLTEEESSRLLRME 525
Query: 372 ETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYF 431
+ LHKR+IGQ++AVKA+SRAIRR R GLK+P RP SFIF+GP+GVGK+EL+KALA + F
Sbjct: 526 DELHKRIIGQEDAVKAVSRAIRRTRAGLKDPRRPSGSFIFAGPSGVGKTELSKALANFLF 585
Query: 432 GSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAH 491
G ++A+I++DM EF +R T S+L G+PPGYVGY EGGQLTE VRR+P++VVLFDEIEKAH
Sbjct: 586 GDDDALIQIDMGEFHDRFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAH 645
Query: 492 PDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGF-DLDYDEKD 550
+++N +LQ+LEDGRLTD +GR VDFKNT+LI TSN+G+ I K +GF + + D
Sbjct: 646 KEIYNTLLQVLEDGRLTDGQGRVVDFKNTVLIFTSNLGTQDISK-AVGMGFSSVGEHDAD 704
Query: 551 SSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDI 610
Y R+K V +ELK++FRPEFLNR+DE++VF QLT+ ++ ++ D+++ V L KD+
Sbjct: 705 GQYTRMKQKVNDELKKHFRPEFLNRIDEVVVFHQLTQDQIVQMVDLLVGRVSKALAQKDM 764
Query: 611 ELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDS- 669
+++TE+ + + G++P GARPLRR I R +ED+++EK+L E+ G+ V VDV+
Sbjct: 765 GIELTEKAKSLLARRGFDPVLGARPLRRTIQREIEDALSEKILFGEVGAGEIVTVDVEGW 824
Query: 670 DGNVTVLNGSSGAPESLADPLP 691
DG + ++ PLP
Sbjct: 825 DGESKETDKATFTFAPRPKPLP 846
>gi|225022124|ref|ZP_03711316.1| hypothetical protein CORMATOL_02157 [Corynebacterium matruchotii
ATCC 33806]
gi|224945057|gb|EEG26266.1| hypothetical protein CORMATOL_02157 [Corynebacterium matruchotii
ATCC 33806]
Length = 890
Score = 764 bits (1973), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/669 (56%), Positives = 510/669 (76%), Gaps = 9/669 (1%)
Query: 25 LEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLA 84
L+++G NLT+ A+EGKLDPVVGR+ +IER++Q+L RRTKNNP LIGEPGVGKTA+ EGLA
Sbjct: 188 LDQFGRNLTQAAKEGKLDPVVGREQEIERIMQVLSRRTKNNPVLIGEPGVGKTAVVEGLA 247
Query: 85 QRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVH 144
I +G VP+T++ K+V +LD+G LVAG++YRG+FEERLKK+++EI Q +IILFIDE+H
Sbjct: 248 LDIVNGKVPETLKDKQVYSLDLGSLVAGSRYRGDFEERLKKVLKEINQRGDIILFIDEIH 307
Query: 145 TLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEP 204
TL+GAGAAEGAIDAA++LKP LARGELQ IGATTLDEYRKHIEKD ALERRFQPV+VPEP
Sbjct: 308 TLVGAGAAEGAIDAASLLKPKLARGELQTIGATTLDEYRKHIEKDAALERRFQPVQVPEP 367
Query: 205 SVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRV 264
SV+ TI ILKGLR+RYE HH++ TD AL +AA LS +YI+DRFLPDKA+DLIDEAG+R+
Sbjct: 368 SVEMTINILKGLRDRYEAHHRVSITDGALTAAANLSDRYINDRFLPDKAVDLIDEAGARM 427
Query: 265 RLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKE 324
R++ PE RE+++ + ++ ++K A+ QDFEKA LRD+E L + + KE
Sbjct: 428 RIKRMTAPEGIREMDERITKVRRQKEAAIDAQDFEKAAGLRDQERQLTEE-----RREKE 482
Query: 325 MSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEA 384
E D+ V E I +++ WTGIPV K++ +ES RLL ME+ LHKR+IGQ++A
Sbjct: 483 KQWRAGELDDIAEVGEE-QIAEVLAHWTGIPVFKLTEEESSRLLNMEDELHKRIIGQEDA 541
Query: 385 VKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSE 444
VKA+SRAIRR R GLK+P RP SFIF+GP+GVGK+EL+KALA + FG ++A+I++DM E
Sbjct: 542 VKAVSRAIRRTRAGLKDPRRPSGSFIFAGPSGVGKTELSKALANFLFGEDDALIQIDMGE 601
Query: 445 FMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILED 504
F +R T S+L G+PPGYVGY EGGQLTE VRR+P++VVLFDEIEKAH +++N +LQ+LED
Sbjct: 602 FHDRFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHKEIYNTLLQVLED 661
Query: 505 GRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFD-LDYDEKDSSYNRIKSLVTEE 563
GRLTD +GR VDFKNT+LI TSN+G+ I K +GF + + D Y R+K+ V +E
Sbjct: 662 GRLTDGQGRIVDFKNTVLIFTSNLGTQDISK-AVGMGFSAVGEHDADGQYERMKNKVNDE 720
Query: 564 LKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVV 623
LK++FRPEFLNR+D+++VF QLTK ++ E+ D+++ V L KD+ +++TE+ + +
Sbjct: 721 LKKHFRPEFLNRIDDIVVFHQLTKEQIVEMVDLLVGRVEKALAAKDMGIELTEQAKNLLA 780
Query: 624 EEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDS-DGNVTVLNGSSGA 682
G++P GARPLRR I R +ED ++EK+L E+ G+ V VDV+ DG+ + ++
Sbjct: 781 ARGFDPVLGARPLRRTIQREIEDVLSEKILFGEVGAGEIVTVDVEGWDGDAKHNDKATFV 840
Query: 683 PESLADPLP 691
PLP
Sbjct: 841 FTPRPKPLP 849
>gi|297172680|gb|ADI23647.1| hypothetical protein [uncultured Gemmatimonadales bacterium
HF4000_15H13]
Length = 826
Score = 764 bits (1972), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/675 (55%), Positives = 501/675 (74%), Gaps = 18/675 (2%)
Query: 11 AGVGGGSS---------GNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRR 61
AG+GGG S +K P L+ + +LT+LA + KLDP +GR +IERVV+IL RR
Sbjct: 153 AGIGGGGSVTPSGKGDKKSKTPALDHFCRDLTELARQEKLDPTIGRATEIERVVEILCRR 212
Query: 62 TKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEE 121
KNNP LIGEPGVGKTAI EGLAQ+I+ G++ + ++ +V+ LDM ++AGTKYRG+FEE
Sbjct: 213 KKNNPVLIGEPGVGKTAIVEGLAQQISRGEITEGLKDYRVLALDMAAVIAGTKYRGQFEE 272
Query: 122 RLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDE 181
RLK +M EI+Q+ +ILFIDE+HTL+GAGAAEGAIDA+N+LKP+LARGELQCIGA+TL+E
Sbjct: 273 RLKAVMNEIQQAQTVILFIDEMHTLVGAGAAEGAIDASNMLKPALARGELQCIGASTLNE 332
Query: 182 YRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSY 241
YRK+IEKD ALERRFQPV V PS ET++ILKGLR YE HH++ DEA+ +AA+L+
Sbjct: 333 YRKYIEKDGALERRFQPVIVDPPSPQETVEILKGLRSHYEDHHRIVIPDEAIENAAKLAD 392
Query: 242 QYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKA 301
+YI+DRFLPDKAID+IDEAG+R R+ A P E EL+ +L +I K EA+ QDFE+A
Sbjct: 393 RYITDRFLPDKAIDVIDEAGARARIASAVPPPEVEELKGQLAEIANRKEEAIGNQDFERA 452
Query: 302 GELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVST 361
ELRD E + I + +E KA P ++ D+ IVS WTG+PV +++
Sbjct: 453 AELRDEEREFSQSIRQQQEAWEEERKAHR------PEISSEDVAFIVSRWTGVPVTRIAQ 506
Query: 362 DESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSE 421
ESDRL+ ME+ LHKR++GQ +A++AISRAIRR+R GLK+P RPI SFIFSGPTGVGK+E
Sbjct: 507 TESDRLVNMEDELHKRIVGQQDAIEAISRAIRRSRAGLKDPRRPIGSFIFSGPTGVGKTE 566
Query: 422 LAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTV 481
LA+ALA + F +A+IR+DMSE+ME+ +VS+LIG+PPGYVGY + G LT+AVRRRPY+V
Sbjct: 567 LARALAEFLFADRDALIRVDMSEYMEKFSVSRLIGAPPGYVGYEDSGALTKAVRRRPYSV 626
Query: 482 VLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIG 541
VL DEIEKAHPDVFN++LQ+L++G LTD+ GR +DFKNT+LIMTSN+G+ I KGG G
Sbjct: 627 VLLDEIEKAHPDVFNILLQVLDEGHLTDNYGRVIDFKNTVLIMTSNLGAREIAKGG---G 683
Query: 542 FDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEV 601
+ SY+ ++ V +E+++ F PEFLNR+D+ IVF L+K E+ EI I+L E+
Sbjct: 684 LGFQSADPTKSYDVMQDKVRQEIERAFNPEFLNRVDDTIVFHPLSKDEIAEIVHILLAEM 743
Query: 602 FDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGD 661
+RL +D+ L +T+ E +V+EGY+ +GARPL+RAI + LED ++EK+L E GD
Sbjct: 744 RERLSEEDMTLTITDAAVELLVDEGYDEKFGARPLKRAIQKFLEDPLSEKILTAEFTAGD 803
Query: 662 SVIVDVDSDGNVTVL 676
+ VD D DG L
Sbjct: 804 EIEVDADPDGGSLTL 818
>gi|379716065|ref|YP_005304402.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
pseudotuberculosis 316]
gi|387139348|ref|YP_005695327.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
pseudotuberculosis CIP 52.97]
gi|387141325|ref|YP_005697303.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
pseudotuberculosis 1/06-A]
gi|389851114|ref|YP_006353349.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
pseudotuberculosis 258]
gi|349735826|gb|AEQ07304.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
pseudotuberculosis CIP 52.97]
gi|355393116|gb|AER69781.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
pseudotuberculosis 1/06-A]
gi|377654771|gb|AFB73120.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
pseudotuberculosis 316]
gi|388248420|gb|AFK17411.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
pseudotuberculosis 258]
Length = 885
Score = 764 bits (1972), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/658 (56%), Positives = 507/658 (77%), Gaps = 13/658 (1%)
Query: 14 GGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPG 73
G G N + L+++G NLT+ A++GKLDPVVGR+ +IER++Q+L RRTKNNP LIGEPG
Sbjct: 175 GAGDRSNSL-VLDQFGRNLTQAAKDGKLDPVVGREKEIERIMQVLSRRTKNNPVLIGEPG 233
Query: 74 VGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQS 133
VGKTA+ EGLA I +G VP+T++ K++ +LD+G LVAG++YRG+FEERLKK+++EI Q
Sbjct: 234 VGKTAVVEGLALDIVNGKVPETLKDKQLYSLDLGSLVAGSRYRGDFEERLKKVLKEINQR 293
Query: 134 DEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALE 193
+IILFIDE+HTL+GAGAAEGAIDAA++LKP LARGELQ IGATTLDEYRKHIEKD ALE
Sbjct: 294 GDIILFIDEIHTLVGAGAAEGAIDAASLLKPKLARGELQTIGATTLDEYRKHIEKDAALE 353
Query: 194 RRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKA 253
RRFQPV VPEPSV+ TI+ILKGLR+RYE HH++ TD AL +AAQLS +YI+DRFLPDKA
Sbjct: 354 RRFQPVNVPEPSVEMTIEILKGLRDRYEAHHRVSITDGALAAAAQLSDRYINDRFLPDKA 413
Query: 254 IDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKA 313
+DLIDEAG+R+R++ PE R+++ + ++ +EK A+ QDFEKA LRD E L
Sbjct: 414 VDLIDEAGARMRIQRMTAPESIRKVDDRIAEVRREKEAAIDAQDFEKAAGLRDTERKLNE 473
Query: 314 QISALVDKGKEMSKAETEAGDVGPV--VTEVDIQHIVSAWTGIPVEKVSTDESDRLLKME 371
+ + + + +GD+ + V E I ++ WTGIPV K++ +ES RLL+ME
Sbjct: 474 E--------RAEKEKQWRSGDLEEIAEVGEEQIAEVLGNWTGIPVFKLTEEESSRLLRME 525
Query: 372 ETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYF 431
+ LHKR+IGQ++AVKA+SRAIRR R GLK+P RP SFIF+GP+GVGK+EL+KALA + F
Sbjct: 526 DELHKRIIGQEDAVKAVSRAIRRTRAGLKDPRRPSGSFIFAGPSGVGKTELSKALANFLF 585
Query: 432 GSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAH 491
G ++A+I++DM EF +R T S+L G+PPGYVGY EGGQLTE VRR+P++VVLFDEIEKAH
Sbjct: 586 GDDDALIQIDMGEFHDRFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAH 645
Query: 492 PDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGF-DLDYDEKD 550
+++N +LQ+LEDGRLTD +GR VDFKNT+LI TSN+G+ I K +GF + + D
Sbjct: 646 KEIYNTLLQVLEDGRLTDGQGRVVDFKNTVLIFTSNLGTQDISK-AVGMGFSSVGEHDAD 704
Query: 551 SSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDI 610
Y+R+K V +ELK++FRPEFLNR+DE++VF QLT+ ++ ++ D+++ V L KD+
Sbjct: 705 GQYSRMKQKVNDELKKHFRPEFLNRIDEVVVFHQLTQDQIVQMVDLLVSRVAKALAQKDM 764
Query: 611 ELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVD 668
+++TE+ + + G++P GARPLRR I R +ED+++EK+L E+ G+ V VDV+
Sbjct: 765 GIELTEKAKSLLARRGFDPVLGARPLRRTIQREVEDALSEKILFGEVGAGEIVTVDVE 822
>gi|319948880|ref|ZP_08022993.1| ATPase AAA-2 domain-containing protein [Dietzia cinnamea P4]
gi|319437482|gb|EFV92489.1| ATPase AAA-2 domain-containing protein [Dietzia cinnamea P4]
Length = 883
Score = 764 bits (1972), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 383/670 (57%), Positives = 518/670 (77%), Gaps = 12/670 (1%)
Query: 3 GESTEAVG--AGVGGGSSGNKMPT--LEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQIL 58
G+ EA G AG GG SG + L+++G NLT+ A EGKLDPVVGR ++ER++Q+L
Sbjct: 147 GKEAEASGTPAGTGGRESGTPSSSTVLDQFGRNLTQAAMEGKLDPVVGRAKEVERIMQVL 206
Query: 59 GRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGE 118
RRTKNNP LIGEPGVGKTA+ EGLAQ I + +VP+T++ K++ +LD+G LVAG++YRG+
Sbjct: 207 SRRTKNNPVLIGEPGVGKTAVVEGLAQAIVNNEVPETLKDKQLYSLDLGSLVAGSRYRGD 266
Query: 119 FEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATT 178
FEERLKK+++EI Q +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATT
Sbjct: 267 FEERLKKVLKEINQRGDIILFIDEIHTLVGAGAAEGAIDAASILKPKLARGELQTIGATT 326
Query: 179 LDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQ 238
L+EYRKHIEKD ALERRFQPV+VPEP V+ +I+ILKGLR+RYE HH++ TD AL +AAQ
Sbjct: 327 LEEYRKHIEKDAALERRFQPVQVPEPGVELSIEILKGLRDRYEAHHRVTITDAALAAAAQ 386
Query: 239 LSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDF 298
L+ +YI+DRFLPDKAIDLIDEAG+R+R++ P + RE ++++ + +EK A+ QDF
Sbjct: 387 LADRYINDRFLPDKAIDLIDEAGARMRIKRMTAPPDLREFDEKIAETRREKESAIDAQDF 446
Query: 299 EKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEK 358
EKA LRD E L I+ ++ K+ + DV VV E I ++ WTGIPV K
Sbjct: 447 EKAAGLRDTEKKL---IAERAEREKQWRAGDM---DVAAVVDEEQIAEVLGNWTGIPVFK 500
Query: 359 VSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVG 418
++ +E+ RLL+ME+ LHKR+IGQ++A+KA+SRAIRR R GLK+P RP SFIF+GP+GVG
Sbjct: 501 LTEEETTRLLRMEDELHKRIIGQEDAIKAVSRAIRRTRAGLKDPKRPSGSFIFAGPSGVG 560
Query: 419 KSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRP 478
K+EL+KALA + FG ++A+I++DM EF +R T S+L G+PPGYVGY EGGQLTE VRR+P
Sbjct: 561 KTELSKALANFLFGEDDALIQIDMGEFHDRFTASRLFGAPPGYVGYEEGGQLTEKVRRKP 620
Query: 479 YTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR 538
++VVLFDEIEKAH +++N +LQ+LEDGRLTD +GR VDFKNT+LI TSN+G+ I K
Sbjct: 621 FSVVLFDEIEKAHSEIYNTLLQVLEDGRLTDGQGRMVDFKNTVLIFTSNLGTKDISK-AV 679
Query: 539 RIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIML 598
+GF D + +Y R+K V +ELK++FRPEFLNR+DE++VF QLT+ ++ ++ D+M+
Sbjct: 680 GMGFQ-SSDNTEDAYERMKQKVNDELKKHFRPEFLNRIDEIVVFHQLTQEQIVQMVDLMI 738
Query: 599 KEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIK 658
V D LK KD++++V++R + + + G++P GARPLRR I R +ED+++EK+L E+
Sbjct: 739 GRVRDALKAKDMDIEVSDRAKSLLAKRGFDPVLGARPLRRTIQREIEDTLSEKILFGEVA 798
Query: 659 EGDSVIVDVD 668
G+ V VDV+
Sbjct: 799 AGELVKVDVE 808
>gi|384516372|ref|YP_005711464.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
ulcerans 809]
gi|334697573|gb|AEG82370.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
ulcerans 809]
Length = 885
Score = 764 bits (1972), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 379/682 (55%), Positives = 514/682 (75%), Gaps = 14/682 (2%)
Query: 14 GGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPG 73
G G N + L+++G NLT+ A++GKLDPVVGR+ +IER++Q+L RRTKNNP LIGEPG
Sbjct: 175 GAGDRSNSL-VLDQFGRNLTQAAKDGKLDPVVGREKEIERIMQVLSRRTKNNPVLIGEPG 233
Query: 74 VGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQS 133
VGKTA+ EGLA I +G VP+T++ K++ +LD+G LVAG++YRG+FEERLKK+++EI Q
Sbjct: 234 VGKTAVVEGLALDIVNGKVPETLKDKQLYSLDLGSLVAGSRYRGDFEERLKKVLKEINQR 293
Query: 134 DEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALE 193
+IILFIDE+HTL+GAGAAEGAIDAA++LKP LARGELQ IGATTLDEYRKHIEKD ALE
Sbjct: 294 GDIILFIDEIHTLVGAGAAEGAIDAASLLKPKLARGELQTIGATTLDEYRKHIEKDAALE 353
Query: 194 RRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKA 253
RRFQPV VPEPSV+ TI+ILKGLR+RYE HH++ TD AL +AAQLS +YI+DRFLPDKA
Sbjct: 354 RRFQPVNVPEPSVEMTIEILKGLRDRYEAHHRVSITDGALAAAAQLSDRYINDRFLPDKA 413
Query: 254 IDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKA 313
+DLIDEAG+R+R++ PE R+++ + ++ +EK A+ QDFEKA LRD E L
Sbjct: 414 VDLIDEAGARMRIQRMTAPESIRKVDDRIAEVRREKEAAIDAQDFEKAAGLRDTERKLNE 473
Query: 314 QISALVDKGKEMSKAETEAGDVGPV--VTEVDIQHIVSAWTGIPVEKVSTDESDRLLKME 371
+ + + + +GD+ + V E I ++ WTGIPV K++ +ES RLL+ME
Sbjct: 474 E--------RAEKEKQWRSGDLEEIAEVGEEQIAEVLGNWTGIPVFKLTEEESSRLLRME 525
Query: 372 ETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYF 431
+ LHKR+IGQ++AVKA+SRAIRR R GLK+P RP SFIF+GP+GVGK+EL+KALA + F
Sbjct: 526 DELHKRIIGQEDAVKAVSRAIRRTRAGLKDPRRPSGSFIFAGPSGVGKTELSKALANFLF 585
Query: 432 GSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAH 491
G ++A+I++DM EF +R T S+L G+PPGYVGY EGGQLTE VRR+P++VVLFDEIEKAH
Sbjct: 586 GDDDALIQIDMGEFHDRFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAH 645
Query: 492 PDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGF-DLDYDEKD 550
+++N +LQ+LEDGRLTD +GR VDFKNT+LI TSN+G+ I K +GF + + D
Sbjct: 646 KEIYNTLLQVLEDGRLTDGQGRVVDFKNTVLIFTSNLGTQDISK-AVGMGFSSVGEHDAD 704
Query: 551 SSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDI 610
Y R+K V +ELK++FRPEFLNR+DE++VF QLT+ ++ ++ D+++ V L KD+
Sbjct: 705 GQYTRMKQKVNDELKKHFRPEFLNRIDEVVVFHQLTQDQIVQMVDLLVGRVSKALAQKDM 764
Query: 611 ELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDS- 669
+++TE+ + + G++P GARPLRR I R +ED+++EK+L E+ G+ V VDV+
Sbjct: 765 GIELTEKAKSLLARRGFDPVLGARPLRRTIQREIEDALSEKILFGEVGAGEIVTVDVEGW 824
Query: 670 DGNVTVLNGSSGAPESLADPLP 691
DG + ++ PLP
Sbjct: 825 DGESKETDKATFTFAPRPKPLP 846
>gi|323357510|ref|YP_004223906.1| ATPase with chaperone activity, ATP-binding subunit [Microbacterium
testaceum StLB037]
gi|323273881|dbj|BAJ74026.1| ATPase with chaperone activity, ATP-binding subunit [Microbacterium
testaceum StLB037]
Length = 841
Score = 764 bits (1972), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 383/672 (56%), Positives = 515/672 (76%), Gaps = 16/672 (2%)
Query: 3 GESTEAVGAGVGGGSSGNKM---PTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 59
G+ V +G G S G L+++G NLT+ A + KLDPV+GR+ +IERV+QIL
Sbjct: 147 GKEPAGVASGAGEQSQGAAQGGSAVLDQFGRNLTQAARDNKLDPVIGREKEIERVMQILS 206
Query: 60 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 119
RR+KNNP LIGEPGVGKTA+ EGLAQ I GDVP+T++ K+V +LD+G L+AG++YRG+F
Sbjct: 207 RRSKNNPVLIGEPGVGKTAVVEGLAQAIVKGDVPETLKDKQVYSLDLGSLIAGSRYRGDF 266
Query: 120 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 179
EERLKK+ +EI+ +II+FIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTL
Sbjct: 267 EERLKKVTKEIRTRGDIIVFIDEIHTLVGAGAAEGAIDAASILKPLLARGELQTIGATTL 326
Query: 180 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 239
DEYRKH EKD ALERRFQP++V EPS+ I ILKGLR+RYE HHK++ TD A+V+AA L
Sbjct: 327 DEYRKHFEKDAALERRFQPIQVAEPSLPHAINILKGLRDRYEAHHKVQITDGAIVAAANL 386
Query: 240 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 299
+ +YISDRFLPDKAIDLIDEAG+R+RL P E RE ++++ ++ ++K +A QDFE
Sbjct: 387 ADRYISDRFLPDKAIDLIDEAGARLRLSILSSPPELREFDEKIAKVREQKEQASEEQDFE 446
Query: 300 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVG--PVVTEVDIQHIVSAWTGIPVE 357
KA LRD E L A+ L + + +GDV VV E I +++ TGIPV
Sbjct: 447 KAASLRDEEKSLLAERLRL--------EKQWRSGDVASHAVVDEGLIAEVLAQATGIPVF 498
Query: 358 KVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGV 417
K++ +ES RL+ ME+TLH+RVIGQ+EA+ A+SR IRR R GLK+P RP SFIF+GPTGV
Sbjct: 499 KLTEEESSRLMFMEKTLHQRVIGQEEAIAALSRTIRRQRAGLKDPKRPSGSFIFAGPTGV 558
Query: 418 GKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRR 477
GK+ELAKALA + F E A+I LDMSEF E+HTVS+L G+PPG+VG+ EGGQLTE VRR+
Sbjct: 559 GKTELAKALAEFLFDDEGALISLDMSEFGEKHTVSRLFGAPPGFVGFEEGGQLTEKVRRK 618
Query: 478 PYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGG 537
P++VVLFDEIEKAHPD+FN +LQILE+GRLTD +GR +DFKNT++IMT+N+GSS I G
Sbjct: 619 PFSVVLFDEIEKAHPDIFNSLLQILEEGRLTDGQGRVIDFKNTVIIMTTNLGSSAI--AG 676
Query: 538 RRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIM 597
+GF ++ + +SY R+K V EELK++F+PEFLNR+D++IVF QL K E+++I +
Sbjct: 677 GPVGFQVEGSAQ-TSYERMKGKVDEELKRHFKPEFLNRVDDVIVFPQLNKDELRQIVGLF 735
Query: 598 LKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREI 657
+K + DRL +D+ +++++ +++++E G++P+ GARPLRRA+ R +ED ++EK+L E+
Sbjct: 736 VKRLADRLLDRDMTVELSDDAKDKLIEIGFDPTLGARPLRRAMQREVEDRLSEKILHGEL 795
Query: 658 KEGDSVIVDVDS 669
+ GD V V V++
Sbjct: 796 ESGDHVKVGVEN 807
>gi|227834051|ref|YP_002835758.1| ATP-dependent Clp protease [Corynebacterium aurimucosum ATCC
700975]
gi|262183463|ref|ZP_06042884.1| ATP-dependent Clp protease [Corynebacterium aurimucosum ATCC
700975]
gi|227455067|gb|ACP33820.1| ATP-dependent Clp protease [Corynebacterium aurimucosum ATCC
700975]
Length = 925
Score = 764 bits (1972), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 373/649 (57%), Positives = 509/649 (78%), Gaps = 16/649 (2%)
Query: 25 LEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLA 84
L+++G NLT+ A +GKLDPVVGR +IER++Q+L RRTKNNP LIGEPGVGKTA+ EGLA
Sbjct: 188 LDQFGRNLTQAARDGKLDPVVGRDSEIERIMQVLSRRTKNNPVLIGEPGVGKTAVVEGLA 247
Query: 85 QRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVH 144
I +G VP+T++ K++ +LD+G LVAG++YRG+FEERLKK+++EI Q +IILFIDE+H
Sbjct: 248 LDIVNGKVPETLKDKQLYSLDLGSLVAGSRYRGDFEERLKKVLKEINQRGDIILFIDEIH 307
Query: 145 TLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEP 204
TL+GAGAAEGAIDAA++LKP LARGELQ IGATTLDEYRKHIEKD ALERRFQPVKV EP
Sbjct: 308 TLVGAGAAEGAIDAASLLKPKLARGELQTIGATTLDEYRKHIEKDAALERRFQPVKVEEP 367
Query: 205 SVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRV 264
S+D+TI ILKGLR++YE HH++ YTDEAL +AA LS +YI+DRFLPDKA+DL+DEAG+R+
Sbjct: 368 SLDDTILILKGLRDKYEAHHRVSYTDEALKAAASLSDRYINDRFLPDKAVDLLDEAGARM 427
Query: 265 RLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKE 324
R++ PE RE++ + ++ KEK A+ QDFEKA LRD+E L G+E
Sbjct: 428 RIKRMTAPEGLREVDDRIAEVRKEKEAAIDAQDFEKAAGLRDKERKL----------GEE 477
Query: 325 MSKAETE--AGDVGPV--VTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIG 380
++ E + +GD+ + V E I +++ WTGIPV K++ ES+RLL MEE LHKR+IG
Sbjct: 478 RAEKEKQWRSGDLEEIAEVGEEQIAEVLAHWTGIPVLKLTEKESNRLLNMEEELHKRIIG 537
Query: 381 QDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRL 440
QD+AVKA+SRAIRR R GLK+P RP SFIF+GP+GVGK+EL+K+LA + FGS++ +I++
Sbjct: 538 QDDAVKAVSRAIRRTRAGLKDPRRPSGSFIFAGPSGVGKTELSKSLANFLFGSDDDLIQI 597
Query: 441 DMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQ 500
DM EF +R T S+L G+PPGYVGY EGGQLTE VRR+P++VVLFDEIEKAH +++N +LQ
Sbjct: 598 DMGEFHDRFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHKEIYNTLLQ 657
Query: 501 ILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFD-LDYDEKDSSYNRIKSL 559
+LEDGRLTD +GR VDFKNT+LI TSN+G+ I K +GF ++ ++ Y R+K+
Sbjct: 658 VLEDGRLTDGQGRVVDFKNTVLIFTSNLGTQDISK-AVGLGFTGSSENDAEAQYERMKNK 716
Query: 560 VTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFR 619
V +ELK++FRPEFLNR+DE++VF QLT+ ++ E+ ++++ V +L +D+ +++T++ +
Sbjct: 717 VNDELKKHFRPEFLNRIDEIVVFHQLTQEQIVEMVELLIARVEKQLSERDMGIELTQKAK 776
Query: 620 ERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVD 668
+ + + G++P GARPLRR I R +ED ++EK+L EI G+ + VDV+
Sbjct: 777 DLLAQRGFDPVLGARPLRRTIQREIEDQLSEKILFGEIGAGEIITVDVE 825
>gi|386741076|ref|YP_006214256.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
pseudotuberculosis 31]
gi|384477770|gb|AFH91566.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
pseudotuberculosis 31]
Length = 885
Score = 764 bits (1972), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/658 (56%), Positives = 507/658 (77%), Gaps = 13/658 (1%)
Query: 14 GGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPG 73
G G N + L+++G NLT+ A++GKLDPVVGR+ +IER++Q+L RRTKNNP LIGEPG
Sbjct: 175 GAGDRSNSL-VLDQFGRNLTQAAKDGKLDPVVGREKEIERIMQVLSRRTKNNPVLIGEPG 233
Query: 74 VGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQS 133
VGKTA+ EGLA I +G VP+T++ K++ +LD+G LVAG++YRG+FEERLKK+++EI Q
Sbjct: 234 VGKTAVVEGLALDIVNGKVPETLKDKQLYSLDLGSLVAGSRYRGDFEERLKKVLKEINQR 293
Query: 134 DEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALE 193
+IILFIDE+HTL+GAGAAEGAIDAA++LKP LARGELQ IGATTLDEYRKHIEKD ALE
Sbjct: 294 GDIILFIDEIHTLVGAGAAEGAIDAASLLKPKLARGELQTIGATTLDEYRKHIEKDAALE 353
Query: 194 RRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKA 253
RRFQPV VPEPSV+ TI+ILKGLR+RYE HH++ TD AL +AAQLS +YI+DRFLPDKA
Sbjct: 354 RRFQPVNVPEPSVEMTIEILKGLRDRYEAHHRVSITDGALAAAAQLSDRYINDRFLPDKA 413
Query: 254 IDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKA 313
+DLIDEAG+R+R++ PE R+++ + ++ +EK A+ QDFEKA LRD E L
Sbjct: 414 VDLIDEAGARMRIQRMTAPESIRKVDDRIAEVRREKEAAIDAQDFEKAAGLRDTERKLNE 473
Query: 314 QISALVDKGKEMSKAETEAGDVGPV--VTEVDIQHIVSAWTGIPVEKVSTDESDRLLKME 371
+ + + + +GD+ + V E I ++ WTGIPV K++ +ES RLL+ME
Sbjct: 474 E--------RAEKEKQWRSGDLEEIAEVGEEQIAEVLGNWTGIPVFKLTEEESSRLLRME 525
Query: 372 ETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYF 431
+ LHKR+IGQ++AVKA+SRAIRR R GLK+P RP SFIF+GP+GVGK+EL+KALA + F
Sbjct: 526 DELHKRIIGQEDAVKAVSRAIRRTRAGLKDPRRPSGSFIFAGPSGVGKTELSKALANFLF 585
Query: 432 GSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAH 491
G ++A+I++DM EF +R T S+L G+PPGYVGY EGGQLTE VRR+P++VVLFDEIEKAH
Sbjct: 586 GDDDALIQIDMGEFHDRFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAH 645
Query: 492 PDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGF-DLDYDEKD 550
+++N +LQ+LEDGRLTD +GR VDFKNT+LI TSN+G+ I K +GF + + D
Sbjct: 646 KEIYNTLLQVLEDGRLTDGQGRVVDFKNTVLIFTSNLGTQDISK-AVGMGFSSVGEHDAD 704
Query: 551 SSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDI 610
Y+R+K V +ELK++FRPEFLNR+DE++VF QLT+ ++ ++ D+++ V L KD+
Sbjct: 705 GQYSRMKQKVNDELKKHFRPEFLNRIDEVVVFHQLTQDQIVQMVDLLVSRVAKALAQKDM 764
Query: 611 ELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVD 668
+++TE+ + + G++P GARPLRR I R +ED+++EK+L E+ G+ V VDV+
Sbjct: 765 GIELTEKAKSLLARRGFDPVLGARPLRRTIQREVEDALSEKILFGEVGAGEIVTVDVE 822
>gi|300859188|ref|YP_003784171.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
pseudotuberculosis FRC41]
gi|384505360|ref|YP_005682030.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
pseudotuberculosis 1002]
gi|300686642|gb|ADK29564.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
pseudotuberculosis FRC41]
gi|302331444|gb|ADL21638.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
pseudotuberculosis 1002]
Length = 885
Score = 764 bits (1972), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 373/658 (56%), Positives = 507/658 (77%), Gaps = 13/658 (1%)
Query: 14 GGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPG 73
G G N + L+++G NLT+ A++GKLDPV+GR+ +IER++Q+L RRTKNNP LIGEPG
Sbjct: 175 GAGDRSNSL-VLDQFGRNLTQAAKDGKLDPVIGREKEIERIMQVLSRRTKNNPVLIGEPG 233
Query: 74 VGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQS 133
VGKTA+ EGLA I +G VP+T++ K++ +LD+G LVAG++YRG+FEERLKK+++EI Q
Sbjct: 234 VGKTAVVEGLALDIVNGKVPETLKDKQLYSLDLGSLVAGSRYRGDFEERLKKVLKEINQR 293
Query: 134 DEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALE 193
+IILFIDE+HTL+GAGAAEGAIDAA++LKP LARGELQ IGATTLDEYRKHIEKD ALE
Sbjct: 294 GDIILFIDEIHTLVGAGAAEGAIDAASLLKPKLARGELQTIGATTLDEYRKHIEKDAALE 353
Query: 194 RRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKA 253
RRFQPV VPEPSV+ TI+ILKGLR+RYE HH++ TD AL +AAQLS +YI+DRFLPDKA
Sbjct: 354 RRFQPVNVPEPSVEMTIEILKGLRDRYEAHHRVSITDGALAAAAQLSDRYINDRFLPDKA 413
Query: 254 IDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKA 313
+DLIDEAG+R+R++ PE R+++ + ++ +EK A+ QDFEKA LRD E L
Sbjct: 414 VDLIDEAGARMRIQRMTAPESIRKVDDRIAEVRREKEAAIDAQDFEKAAGLRDTERKLNE 473
Query: 314 QISALVDKGKEMSKAETEAGDVGPV--VTEVDIQHIVSAWTGIPVEKVSTDESDRLLKME 371
+ + + + +GD+ + V E I ++ WTGIPV K++ +ES RLL+ME
Sbjct: 474 E--------RAEKEKQWRSGDLEEIAEVGEEQIAEVLGNWTGIPVFKLTEEESSRLLRME 525
Query: 372 ETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYF 431
+ LHKR+IGQ++AVKA+SRAIRR R GLK+P RP SFIF+GP+GVGK+EL+KALA + F
Sbjct: 526 DELHKRIIGQEDAVKAVSRAIRRTRAGLKDPRRPSGSFIFAGPSGVGKTELSKALANFLF 585
Query: 432 GSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAH 491
G ++A+I++DM EF +R T S+L G+PPGYVGY EGGQLTE VRR+P++VVLFDEIEKAH
Sbjct: 586 GDDDALIQIDMGEFHDRFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAH 645
Query: 492 PDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGF-DLDYDEKD 550
+++N +LQ+LEDGRLTD +GR VDFKNT+LI TSN+G+ I K +GF + + D
Sbjct: 646 KEIYNTLLQVLEDGRLTDGQGRVVDFKNTVLIFTSNLGTQDISK-AVGMGFSSVGEHDAD 704
Query: 551 SSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDI 610
Y+R+K V +ELK++FRPEFLNR+DE++VF QLT+ ++ ++ D+++ V L KD+
Sbjct: 705 GQYSRMKQKVNDELKKHFRPEFLNRIDEVVVFHQLTQDQIVQMVDLLVSRVAKALAQKDM 764
Query: 611 ELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVD 668
+++TE+ + + G++P GARPLRR I R +ED+++EK+L E+ G+ V VDV+
Sbjct: 765 GIELTEKAKSLLARRGFDPVLGARPLRRTIQREIEDALSEKILFGEVGAGEIVTVDVE 822
>gi|348173006|ref|ZP_08879900.1| putative ATP-dependent Clp protease [Saccharopolyspora spinosa NRRL
18395]
Length = 850
Score = 764 bits (1972), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/669 (57%), Positives = 521/669 (77%), Gaps = 19/669 (2%)
Query: 4 ESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTK 63
E EA G G G SS L+++G NLT+ A EGKLDPV+GR+ +IER++Q+L RRTK
Sbjct: 149 EPAEAGGRGEGTPSSS---LVLDQFGRNLTQSAREGKLDPVIGREKEIERIMQVLSRRTK 205
Query: 64 NNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERL 123
NNP LIGE GVGKTA+ EGLAQ++ G+VP+T++ K++ TLD+G LVAG++YRG+FEERL
Sbjct: 206 NNPVLIGEAGVGKTAVVEGLAQKVVKGEVPETLKDKQLYTLDLGSLVAGSRYRGDFEERL 265
Query: 124 KKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYR 183
KK+++EIK +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTL+EYR
Sbjct: 266 KKVLKEIKTRGDIILFIDEIHTLVGAGAAEGAIDAASILKPMLARGELQTIGATTLEEYR 325
Query: 184 KHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQY 243
K++EKDPALERRFQP++V EPS+ T++ILKGLR+RYE HH++ TD ALV+AA L+ +Y
Sbjct: 326 KYVEKDPALERRFQPIQVGEPSLQHTVEILKGLRDRYEAHHRVSITDSALVAAASLADRY 385
Query: 244 ISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGE 303
I+DRFLPDKAIDLIDEAG+R+R+R P + RE ++++ + +EK A+ QDFE+A
Sbjct: 386 INDRFLPDKAIDLIDEAGARMRIRRMTAPPDLREFDEKIADVRREKESAIDAQDFERAAR 445
Query: 304 LRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKVS 360
LRD E L Q KE + + +AGD+ VV EVD I +++ WTGIPV K++
Sbjct: 446 LRDEEKQLLGQ--------KEEREKQWKAGDL-DVVAEVDDEQIAEVLANWTGIPVFKLT 496
Query: 361 TDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 420
+E+ RLL+ME+ LHKR+IGQ++AVKA+S+AIRR R GLK+P RP SFIF+GP+GVGK+
Sbjct: 497 EEETTRLLRMEDELHKRIIGQNDAVKAVSQAIRRTRAGLKDPKRPSGSFIFAGPSGVGKT 556
Query: 421 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 480
EL+KALA + FG ++A++++DM EF +R+T S+L G+PPGYVGY EGGQLTE VRR+P++
Sbjct: 557 ELSKALAEFLFGDDDALVQIDMGEFHDRYTASRLFGAPPGYVGYEEGGQLTEKVRRKPFS 616
Query: 481 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI 540
VVLFDEIEKAH +++N +LQ+LEDGRLTD +GRTVDFKNT+LI TSN+G+ I K +
Sbjct: 617 VVLFDEIEKAHQEIYNTLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGTQDISKA---V 673
Query: 541 GFDLDYDE-KDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 599
G + DS+Y R+K+ V EE+K++FRPEFLNR+D++IVF QLT+ E+ ++ D++
Sbjct: 674 GLGFSSGQGADSNYERMKNKVNEEMKKHFRPEFLNRIDDVIVFHQLTEAEIIQMVDLLAG 733
Query: 600 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 659
V LK KD++L++T++ ++ + + G++P GARPLRR I R +ED ++EK+L E++
Sbjct: 734 RVEKALKAKDMDLELTDKAKKLLAKRGFDPVLGARPLRRTIQREIEDKLSEKILFGEVQP 793
Query: 660 GDSVIVDVD 668
G VIVDV+
Sbjct: 794 GQIVIVDVE 802
>gi|188590460|ref|YP_001919641.1| negative regulator of genetic competence ClpC/mecB [Clostridium
botulinum E3 str. Alaska E43]
gi|188500741|gb|ACD53877.1| putative negative regulator of genetic competence MecB/ClpC
[Clostridium botulinum E3 str. Alaska E43]
Length = 814
Score = 763 bits (1971), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 376/657 (57%), Positives = 508/657 (77%), Gaps = 8/657 (1%)
Query: 17 SSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGK 76
S NK P L++YG +LT+ A +G LDPV+GR + +RV++IL RR KNNPCLIGEPGVGK
Sbjct: 161 SEKNKTPMLDKYGRDLTQFARDGGLDPVIGRDSENQRVLEILCRRIKNNPCLIGEPGVGK 220
Query: 77 TAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEI 136
TA+ EGLAQRI G++P+ + K++++LD+ L+AG KYRGEFE+RLKK+M EI++ I
Sbjct: 221 TAVIEGLAQRIVEGNIPEILRDKRIVSLDLTALLAGAKYRGEFEDRLKKVMLEIEKDKSI 280
Query: 137 ILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRF 196
I+FIDE+HT+IGAGAAEGAIDA+NILKP+L+RG++QCIGATT++EYRKHIEKD ALERRF
Sbjct: 281 IIFIDEIHTIIGAGAAEGAIDASNILKPALSRGQIQCIGATTINEYRKHIEKDSALERRF 340
Query: 197 QPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDL 256
QPV V EPS DET+ ILKGLR +YE HH + T++AL +A LS +Y++DRF+PDKAIDL
Sbjct: 341 QPVNVGEPSKDETLIILKGLRVKYEEHHNVNITEKALEAAVDLSDRYVTDRFMPDKAIDL 400
Query: 257 IDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQIS 316
IDEA ++VR+++ P + +E ++++ITKEK E +R QDFEKA ++RD E +LK ++
Sbjct: 401 IDEACAKVRIKNLIPPTNLKSMEDKIKEITKEKEECIRVQDFEKAADMRDIENNLKEELE 460
Query: 317 ALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHK 376
AL KE S + V E DI +VSAWT IP +K++ ES++LLK+E L K
Sbjct: 461 AL---RKEWSDKNSNK---LLNVDEEDIAEVVSAWTKIPAKKLTEKESEKLLKLENILEK 514
Query: 377 RVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEA 436
RVIGQ EAV++I++A+RRARVG+K+PNRPI +FIF GPTGVGK+EL+KALA FG E +
Sbjct: 515 RVIGQTEAVESIAKAVRRARVGIKDPNRPIGTFIFLGPTGVGKTELSKALAEAMFGDENS 574
Query: 437 MIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFN 496
+IR+DMSE+ME ++VSKLIGSPPGYVGY +GGQLTEAVRR+PY+VVL DEIEKAH DVFN
Sbjct: 575 IIRIDMSEYMESNSVSKLIGSPPGYVGYDDGGQLTEAVRRKPYSVVLLDEIEKAHQDVFN 634
Query: 497 MMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRI 556
++LQI+EDGRLTDS G+ V+FKNT++IMTSNVG+ I+K + IGF+ DE +S Y ++
Sbjct: 635 ILLQIMEDGRLTDSHGKVVNFKNTIVIMTSNVGAHQIKK-QKAIGFNTSVDE-NSEYEKM 692
Query: 557 KSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTE 616
K V EELK+ F+PEFLNR+D+ IVF +L + ++ +I D+MLK + RL+ K+I L +
Sbjct: 693 KDNVLEELKRSFKPEFLNRIDDTIVFHKLKEEDLLDIVDLMLKSITKRLENKNIHLNFEK 752
Query: 617 RFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNV 673
++ ++ + + +YGARPLRR I + +ED ++E++L IK GD + V+ D V
Sbjct: 753 DSKKFLINKRVDLNYGARPLRRIITKEVEDKLSEEILLGNIKIGDRIKVNESKDNLV 809
>gi|257057497|ref|YP_003135329.1| ATPase with chaperone activity, ATP-binding subunit
[Saccharomonospora viridis DSM 43017]
gi|256587369|gb|ACU98502.1| ATPase with chaperone activity, ATP-binding subunit
[Saccharomonospora viridis DSM 43017]
Length = 851
Score = 763 bits (1971), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/669 (57%), Positives = 519/669 (77%), Gaps = 15/669 (2%)
Query: 3 GESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRT 62
G+ GAG G G+ + + L+++G NLT A EGKLDPV+GR +IERV+Q+L RRT
Sbjct: 147 GKEPAEAGAGRGEGTPSSSL-VLDQFGRNLTAAAREGKLDPVIGRSKEIERVMQVLSRRT 205
Query: 63 KNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEER 122
KNNP LIGEPGVGKTA+ EGLAQ I G+VP+T++ K++ TLD+G LVAG++YRG+FEER
Sbjct: 206 KNNPVLIGEPGVGKTAVVEGLAQNIVKGEVPETLKDKQLYTLDLGSLVAGSRYRGDFEER 265
Query: 123 LKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEY 182
LKK+++EIK +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTL+EY
Sbjct: 266 LKKVLKEIKTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIGATTLEEY 325
Query: 183 RKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQ 242
RK+IEKD ALERRFQP++V EPS++ TI+ILKGLR+RYE HH++ TD AL +AA L+ +
Sbjct: 326 RKYIEKDAALERRFQPIQVGEPSLEHTIEILKGLRDRYEAHHRVSITDSALAAAATLADR 385
Query: 243 YISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAG 302
YI+DR+LPDKAIDLIDEAG+R+R+R P + RE ++++ ++ +EK A+ QDFE+A
Sbjct: 386 YINDRYLPDKAIDLIDEAGARMRIRRMTAPPDLREFDEKIAEVRREKESAIDAQDFERAA 445
Query: 303 ELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKV 359
LRD E L Q K + + + GD+ VV EVD I +++ WTGIPV K+
Sbjct: 446 RLRDEEKTLLGQ--------KAEREKQWKDGDL-DVVAEVDDEQIAEVLANWTGIPVFKL 496
Query: 360 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 419
+ +E+ RLL+MEE LHKR+IGQ++AVKA+S+AIRR R GLK+P RP SFIF+GP+GVGK
Sbjct: 497 TEEETTRLLRMEEELHKRIIGQEDAVKAVSQAIRRTRAGLKDPKRPSGSFIFAGPSGVGK 556
Query: 420 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 479
+EL+KALA + FG ++A+I++DM EF +R+T S+L G+PPGYVGY EGGQLTE VRR+P+
Sbjct: 557 TELSKALANFLFGEDDALIQIDMGEFHDRYTASRLFGAPPGYVGYEEGGQLTEKVRRKPF 616
Query: 480 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 539
+VVLFDEIEKAH +++N +LQ+LEDGRLTD +GRTVDFKNT+LI TSN+G+ I K
Sbjct: 617 SVVLFDEIEKAHQEIYNTLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGTQDISK-SVS 675
Query: 540 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 599
+GF DE D Y ++K V EE+K++FRPEFLNR+D++IVF QLT+ ++ ++ D+M+
Sbjct: 676 LGFSSSRDETD-RYEKMKQKVHEEMKKHFRPEFLNRIDDIIVFHQLTQEQIIQMVDLMVS 734
Query: 600 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 659
V ++LK KD+ L++T++ + + + G++P GARPLRR I R +ED ++EK+L E++
Sbjct: 735 RVEEQLKAKDMALELTDKAKALLAKRGFDPVLGARPLRRTIQREIEDQLSEKILFGEVQP 794
Query: 660 GDSVIVDVD 668
G +IVDV+
Sbjct: 795 GQIIIVDVE 803
>gi|429757829|ref|ZP_19290359.1| negative regulator of genetic competence ClpC/MecB [Actinomyces sp.
oral taxon 181 str. F0379]
gi|429174420|gb|EKY15897.1| negative regulator of genetic competence ClpC/MecB [Actinomyces sp.
oral taxon 181 str. F0379]
Length = 821
Score = 763 bits (1971), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/673 (57%), Positives = 517/673 (76%), Gaps = 23/673 (3%)
Query: 7 EAVGAGVGGGSSG-NKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNN 65
E+VG G SG LE++G NLT+ A E KLDPV+GR+ +++RV+QIL RRTKNN
Sbjct: 154 ESVGVGASSTGSGQTNSAILEQFGRNLTQAARENKLDPVIGRRTEMQRVMQILSRRTKNN 213
Query: 66 PCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKK 125
P L+GEPGVGKTA+ EGLAQ I +GDVP+TI+ K++ +LDMG LVAG++YRG+FEERLKK
Sbjct: 214 PVLVGEPGVGKTAVVEGLAQAIVAGDVPETIKDKQIYSLDMGALVAGSRYRGDFEERLKK 273
Query: 126 LMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKH 185
+++EI+ +IILFIDE+HTL+GAGAAEG+IDA+ +LKP LARGELQ IGATT DEYRK+
Sbjct: 274 ILKEIRTRGDIILFIDEIHTLVGAGAAEGSIDASQMLKPMLARGELQTIGATTSDEYRKY 333
Query: 186 IEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYIS 245
IEKD ALERRFQPVKV EPSV+ET+ ILKGLR+RYE HH++ TD A+ +AA+L+ +Y+S
Sbjct: 334 IEKDAALERRFQPVKVDEPSVEETVGILKGLRDRYEAHHRVIITDAAIQAAAELADRYVS 393
Query: 246 DRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELR 305
DRFLPDKAIDL+DEAG+R+R+ P E REL++++ ++ + K A+ QDFEKA LR
Sbjct: 394 DRFLPDKAIDLMDEAGARLRISRMTAPPELRELDEKIAEVKRNKESAIDDQDFEKAAALR 453
Query: 306 DREMDL----KAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVST 361
D E L K + S+ D +E A E G E DI +++ TGIPV K++
Sbjct: 454 DEEQKLTEERKQKESSWRDGSRE---AIAEVG-------EDDIAEVLAMSTGIPVFKLTQ 503
Query: 362 DESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSE 421
ES +LLKME+ LHKRVIGQD AVKA++++IRR R GLK+P RP SFIF+GPTGVGK+E
Sbjct: 504 TESAKLLKMEDELHKRVIGQDAAVKALAQSIRRTRSGLKDPKRPGGSFIFAGPTGVGKTE 563
Query: 422 LAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTV 481
LAKALA + FG E+A+I+LDMSEF E+HT S+L G+PPGYVGY EGG+LTE VRRRP++V
Sbjct: 564 LAKALAEFLFGDEDALIQLDMSEFSEKHTSSRLFGAPPGYVGYDEGGELTEKVRRRPFSV 623
Query: 482 VLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKG---GR 538
VLFDE+EKAHPD+FN +LQILE+GRLTDS+GR VDFKNT++IMT+N+G+ I KG G
Sbjct: 624 VLFDEVEKAHPDIFNSLLQILEEGRLTDSQGRKVDFKNTVIIMTTNLGTRDINKGVLTGF 683
Query: 539 RIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIML 598
+ ++ +D Y+R+K+ V EELKQ+FRPEFLNR+DE++VF L K ++K+I D+M+
Sbjct: 684 QSTENITHD-----YSRMKAKVNEELKQHFRPEFLNRVDEVVVFPPLDKEQIKQIVDLMI 738
Query: 599 KEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIK 658
+ R++ +D++LQ+T+ RE + + G++P GARPLRRAI R +ED+++E++L +I
Sbjct: 739 ANLAKRMEAQDMKLQITDEARELLADRGFDPVLGARPLRRAIQRDIEDALSERILFGDIL 798
Query: 659 EGDSVIVDVDSDG 671
G V V V +G
Sbjct: 799 PGQVVTVGVKGEG 811
>gi|397654739|ref|YP_006495422.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
ulcerans 0102]
gi|393403695|dbj|BAM28187.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
ulcerans 0102]
Length = 885
Score = 763 bits (1971), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 379/682 (55%), Positives = 514/682 (75%), Gaps = 14/682 (2%)
Query: 14 GGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPG 73
G G N + L+++G NLT+ A++GKLDPVVGR+ +IER++Q+L RRTKNNP LIGEPG
Sbjct: 175 GAGDRSNSL-VLDQFGRNLTQAAKDGKLDPVVGREKEIERIMQVLSRRTKNNPVLIGEPG 233
Query: 74 VGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQS 133
VGKTA+ EGLA I +G VP+T++ K++ +LD+G LVAG++YRG+FEERLKK+++EI Q
Sbjct: 234 VGKTAVVEGLALDIVNGKVPETLKDKQLYSLDLGSLVAGSRYRGDFEERLKKVLKEINQR 293
Query: 134 DEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALE 193
+IILFIDE+HTL+GAGAAEGAIDAA++LKP LARGELQ IGATTLDEYRKHIEKD ALE
Sbjct: 294 GDIILFIDEIHTLVGAGAAEGAIDAASLLKPKLARGELQTIGATTLDEYRKHIEKDAALE 353
Query: 194 RRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKA 253
RRFQPV VPEPSV+ TI+ILKGLR+RYE HH++ TD AL +AAQLS +YI+DRFLPDKA
Sbjct: 354 RRFQPVNVPEPSVEMTIEILKGLRDRYEAHHRVSITDGALAAAAQLSDRYINDRFLPDKA 413
Query: 254 IDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKA 313
+DLIDEAG+R+R++ PE R+++ + ++ +EK A+ QDFEKA LRD E L
Sbjct: 414 VDLIDEAGARMRIQRMTAPESIRKVDDRIAEVRREKEAAIDAQDFEKAAGLRDTERKLNE 473
Query: 314 QISALVDKGKEMSKAETEAGDVGPV--VTEVDIQHIVSAWTGIPVEKVSTDESDRLLKME 371
+ + + + +GD+ + V E I ++ WTGIPV K++ +ES RLL+ME
Sbjct: 474 E--------RAEKEKQWRSGDLEEIAEVGEEQIAEVLGNWTGIPVFKLTEEESSRLLRME 525
Query: 372 ETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYF 431
+ LHKR+IGQ++AVKA+SRAIRR R GLK+P RP SFIF+GP+GVGK+EL+KALA + F
Sbjct: 526 DELHKRIIGQEDAVKAVSRAIRRTRAGLKDPRRPSGSFIFAGPSGVGKTELSKALANFLF 585
Query: 432 GSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAH 491
G ++A+I++DM EF +R T S+L G+PPGYVGY EGGQLTE VRR+P++VVLFDEIEKAH
Sbjct: 586 GDDDALIQIDMGEFHDRFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAH 645
Query: 492 PDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGF-DLDYDEKD 550
+++N +LQ+LEDGRLTD +GR VDFKNT+LI TSN+G+ I K +GF + + D
Sbjct: 646 KEIYNTLLQVLEDGRLTDGQGRVVDFKNTVLIFTSNLGTQDISK-AVGMGFSSVGEHDAD 704
Query: 551 SSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDI 610
Y R+K V +ELK++FRPEFLNR+DE++VF QLT+ ++ ++ D+++ V L KD+
Sbjct: 705 GQYTRMKQKVNDELKKHFRPEFLNRIDEVVVFHQLTQDQIVQMVDLLVGRVSKALAQKDM 764
Query: 611 ELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDS- 669
+++TE+ + + G++P GARPLRR I R +ED+++EK+L E+ G+ V VDV+
Sbjct: 765 GIELTEKAKSLLAGRGFDPVLGARPLRRTIQREIEDALSEKILFGEVGAGEIVTVDVEGW 824
Query: 670 DGNVTVLNGSSGAPESLADPLP 691
DG + ++ PLP
Sbjct: 825 DGESKETDKATFTFAPRPKPLP 846
>gi|418046563|ref|ZP_12684651.1| ATPase AAA-2 domain protein [Mycobacterium rhodesiae JS60]
gi|353192233|gb|EHB57737.1| ATPase AAA-2 domain protein [Mycobacterium rhodesiae JS60]
Length = 845
Score = 763 bits (1971), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 379/648 (58%), Positives = 507/648 (78%), Gaps = 15/648 (2%)
Query: 25 LEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLA 84
L+++G NLT A EGKLDPV+GR+ +IERV+Q+L RRTKNNP LIGEPGVGKTA+ EGLA
Sbjct: 171 LDQFGRNLTAAAMEGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLA 230
Query: 85 QRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVH 144
Q I G+VP+T++ K++ TLD+G LVAG++YRG+FEERLKK+++EI +IILFIDE+H
Sbjct: 231 QAIVHGEVPETLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDELH 290
Query: 145 TLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEP 204
TL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEYRK+IEKD ALERRFQPV+V EP
Sbjct: 291 TLVGAGAAEGAIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEP 350
Query: 205 SVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRV 264
+V TI+ILKGLR+RYE HH++ TD A+V+AA L+ +YI+DRFLPDKAIDLIDEAG+R+
Sbjct: 351 TVAHTIEILKGLRDRYEAHHRVSITDAAMVAAATLADRYINDRFLPDKAIDLIDEAGARM 410
Query: 265 RLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKE 324
R+R P + RE ++++ +EK A+ QDFEKA LRDRE L AQ +
Sbjct: 411 RIRRMTAPPDLREFDEKIADARREKESAIDAQDFEKAANLRDREKQLVAQ--------RA 462
Query: 325 MSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQ 381
+ + +GD+ VV EVD I ++ WTGIPV K++ +E+ RLL+ME+ LHKR+IGQ
Sbjct: 463 EREKQWRSGDL-DVVAEVDDEQIAEVLGNWTGIPVFKLTEEETTRLLRMEDELHKRIIGQ 521
Query: 382 DEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLD 441
++AV+A+S+AIRR R GLK+P RP SFIF+GP+GVGK+EL+KALA + FG ++A+I++D
Sbjct: 522 EDAVRAVSKAIRRTRAGLKDPKRPSGSFIFAGPSGVGKTELSKALAEFLFGDDDALIQID 581
Query: 442 MSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQI 501
M EF +R T S+L G+PPGYVGY EGGQLTE VRR+P++VVLFDEIEKAH +++N +LQ+
Sbjct: 582 MGEFHDRFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNTLLQV 641
Query: 502 LEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVT 561
LEDGRLTD +GRTVDFKNT+LI TSN+G+S I K +G +++Y R+K V
Sbjct: 642 LEDGRLTDGQGRTVDFKNTVLIFTSNLGTSDISKA---VGLGFTQGGGENNYERMKQKVN 698
Query: 562 EELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRER 621
+ELK++FRPEFLNR+D++IVF QLT+ E+ ++ D+M+ V +LKTKD+E+ +T++ +
Sbjct: 699 DELKKHFRPEFLNRIDDIIVFHQLTRDEIIQMVDLMVSRVSKQLKTKDMEMDLTDKAKAL 758
Query: 622 VVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDS 669
+ + G++P GARPLRR I R +ED+++EK+L E+ G V VDVD+
Sbjct: 759 LAKRGFDPVLGARPLRRTIQREIEDALSEKILFEEVGPGQLVTVDVDN 806
>gi|296118950|ref|ZP_06837523.1| ATP-dependent Clp protease, ATP-binding subunit ClpC
[Corynebacterium ammoniagenes DSM 20306]
gi|295968048|gb|EFG81300.1| ATP-dependent Clp protease, ATP-binding subunit ClpC
[Corynebacterium ammoniagenes DSM 20306]
Length = 905
Score = 763 bits (1970), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 371/647 (57%), Positives = 507/647 (78%), Gaps = 12/647 (1%)
Query: 25 LEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLA 84
L+++G NLT+ A++GKLDPVVGR+ +IER++Q+L RRTKNNP LIGEPGVGKTA+ EGLA
Sbjct: 186 LDQFGRNLTQAAKDGKLDPVVGRESEIERIMQVLSRRTKNNPVLIGEPGVGKTAVVEGLA 245
Query: 85 QRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVH 144
I +G VP+T++ K+V +LD+G LVAG++YRG+FEERLKK+++EI Q +IILFIDE+H
Sbjct: 246 LDIVNGKVPETLKDKQVYSLDLGSLVAGSRYRGDFEERLKKVLKEINQRGDIILFIDEIH 305
Query: 145 TLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEP 204
TL+GAGAAEGAIDAA++LKP LARGELQ IGATTLDEYRKHIEKD ALERRFQPV+V EP
Sbjct: 306 TLVGAGAAEGAIDAASLLKPKLARGELQTIGATTLDEYRKHIEKDAALERRFQPVQVDEP 365
Query: 205 SVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRV 264
S+++TI IL+GLR++YE HH++ YTD+AL +AA LS +YI+DRFLPDKA+DL+DEAG+R+
Sbjct: 366 SMEDTITILRGLRDKYEAHHRVSYTDDALKAAASLSDRYINDRFLPDKAVDLLDEAGARM 425
Query: 265 RLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKE 324
R+R P+ RE++ + + KEK A+ QDFEKA LRD E L + S
Sbjct: 426 RIRRMTAPKGIREVDDRIADVRKEKEAAIDAQDFEKAAGLRDTERKLHEERST------- 478
Query: 325 MSKAETEAGDVGPV--VTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQD 382
+ + +GD+ + +TE I +++ WTGIPV K++ ES RLL MEE LHKR+IGQ+
Sbjct: 479 -KEKQWRSGDLEEIAEITEDQIAEVLAHWTGIPVLKLTEKESSRLLNMEEELHKRIIGQN 537
Query: 383 EAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDM 442
EAVKA+SRAIRR R GLK+P RP SFIF+GP+GVGK+EL+KALA + FGS++ +I++DM
Sbjct: 538 EAVKAVSRAIRRTRAGLKDPRRPSGSFIFAGPSGVGKTELSKALANFLFGSDDDLIQIDM 597
Query: 443 SEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQIL 502
EF +R T S+L G+PPGYVGY EGGQLTE VRR+P++VVLFDEIEKAH +++N +LQ+L
Sbjct: 598 GEFHDRFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHKEIYNTLLQVL 657
Query: 503 EDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGF-DLDYDEKDSSYNRIKSLVT 561
EDGRLTD +GR VDFKNT+LI TSN+G+ I K +GF D + D+ Y+R+K+ V
Sbjct: 658 EDGRLTDGQGRVVDFKNTVLIFTSNLGTQDISK-AVGLGFTSNDEADSDAQYDRMKNKVN 716
Query: 562 EELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRER 621
+ELK++FRPEFLNR+DE++VF QLT+ E+ ++ ++++ V +L +D+ +++T++ ++
Sbjct: 717 DELKKHFRPEFLNRIDEIVVFHQLTRDEIVQMVELLIGRVETQLAERDMGIELTQKAKDL 776
Query: 622 VVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVD 668
+ + G++P GARPLRR I R +ED ++EK+L EI G+ + VDV+
Sbjct: 777 LAKRGFDPVLGARPLRRTIQREIEDQLSEKILYGEIGAGEIISVDVE 823
>gi|251778894|ref|ZP_04821814.1| putative negative regulator of genetic competence MecB/ClpC
[Clostridium botulinum E1 str. 'BoNT E Beluga']
gi|243083209|gb|EES49099.1| putative negative regulator of genetic competence MecB/ClpC
[Clostridium botulinum E1 str. 'BoNT E Beluga']
Length = 814
Score = 763 bits (1970), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/657 (56%), Positives = 509/657 (77%), Gaps = 8/657 (1%)
Query: 17 SSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGK 76
S NK P L++YG +LT+ A +G LDPV+GR + +RV++IL RR KNNPCLIGEPGVGK
Sbjct: 161 SEKNKTPMLDKYGRDLTQFARDGGLDPVIGRDSENQRVLEILCRRIKNNPCLIGEPGVGK 220
Query: 77 TAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEI 136
TA+ EGLAQRI G++P+ + K++++LD+ L+AG KYRGEFE+RLKK+M EI++ I
Sbjct: 221 TAVIEGLAQRIVEGNIPEILRDKRIVSLDLTALLAGAKYRGEFEDRLKKVMLEIEKDKSI 280
Query: 137 ILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRF 196
I+FIDE+HT+IGAGAAEGAIDA+NILKP+L+RG++QCIGATT++EYRKHIEKD ALERRF
Sbjct: 281 IIFIDEIHTIIGAGAAEGAIDASNILKPALSRGQIQCIGATTINEYRKHIEKDSALERRF 340
Query: 197 QPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDL 256
QPV V EPS DET+ ILKGLR +YE HH + T++AL +A LS +Y++DRF+PDKAIDL
Sbjct: 341 QPVNVGEPSKDETLIILKGLRVKYEEHHNVNITEKALEAAVDLSDRYVTDRFMPDKAIDL 400
Query: 257 IDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQIS 316
IDEA ++VR+++ P + +E++++++TKEK E +R QDFEKA ++RD E +LK ++
Sbjct: 401 IDEACAKVRIKNLIPPTNLKSMEEKIKEVTKEKEECIRVQDFEKAADMRDIENNLKEELE 460
Query: 317 ALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHK 376
AL KE S + V E DI +VSAWT IP +K++ ES++LLK+E L K
Sbjct: 461 AL---RKEWSDKNSNK---LLNVDEEDIAEVVSAWTKIPAKKLTEKESEKLLKLENILEK 514
Query: 377 RVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEA 436
RVIGQ EAV++I++A+RRARVG+K+PNRPI +FIF GPTGVGK+EL+KALA FG E +
Sbjct: 515 RVIGQTEAVESIAKAVRRARVGIKDPNRPIGTFIFLGPTGVGKTELSKALAEAMFGDENS 574
Query: 437 MIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFN 496
+IR+DMSE+ME ++VSKLIGSPPGY+GY +GGQLTEAVRR+PY+VVL DEIEKAH DVFN
Sbjct: 575 IIRIDMSEYMESNSVSKLIGSPPGYIGYDDGGQLTEAVRRKPYSVVLLDEIEKAHQDVFN 634
Query: 497 MMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRI 556
++LQI+EDGRLTDS G+ V+FKNT++IMTSNVG+ I+K + IGF+ DE +S Y ++
Sbjct: 635 ILLQIMEDGRLTDSHGKVVNFKNTIVIMTSNVGAHQIKK-QKAIGFNTSVDE-NSEYEKM 692
Query: 557 KSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTE 616
K V EELK+ F+PEFLNR+D+ IVF +L + ++ +I D+MLK + RL+ K+I L +
Sbjct: 693 KDNVLEELKRSFKPEFLNRIDDTIVFHKLKEEDLLDIVDLMLKSITKRLENKNIHLNFEK 752
Query: 617 RFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNV 673
++ ++ + + +YGARPLRR I + +ED ++E++L IK GD + V+ D V
Sbjct: 753 DSKKFLINKRVDLNYGARPLRRIITKEVEDKLSEEILLGNIKIGDRIKVNESKDNLV 809
>gi|397669226|ref|YP_006510761.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium propionicum F0230a]
gi|395143331|gb|AFN47438.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium propionicum F0230a]
Length = 831
Score = 763 bits (1970), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 376/657 (57%), Positives = 507/657 (77%), Gaps = 8/657 (1%)
Query: 15 GGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGV 74
G + L+++G NLT+ A E +LDPV+GR +IERV+ +L RRTKNNP LIGEPGV
Sbjct: 158 AGPEKSSSQVLDQFGRNLTQAARENRLDPVIGRVSEIERVMTVLSRRTKNNPVLIGEPGV 217
Query: 75 GKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSD 134
GKTA+ EGL+Q I GDVP+T+ K++ TLD+G LVAG++YRG+FEERLKK+++EIK
Sbjct: 218 GKTAVVEGLSQAIVRGDVPETLRDKQIYTLDLGALVAGSRYRGDFEERLKKVLKEIKTRG 277
Query: 135 EIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALER 194
+I+LFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEYRKHIEKD ALER
Sbjct: 278 DIMLFIDEIHTLVGAGAAEGAIDAASILKPMLARGELQTIGATTLDEYRKHIEKDAALER 337
Query: 195 RFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAI 254
RFQP++V EPSV TI ILKGLR+RYE HH++ TDEAL +AA ++ +YI DRFLPDKAI
Sbjct: 338 RFQPIQVAEPSVALTIDILKGLRDRYEAHHRITITDEALTAAATMADRYIQDRFLPDKAI 397
Query: 255 DLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQ 314
DLIDEAG+R+R++ P + RE ++++ ++ EK+ A+ QDFE A LRD ++AQ
Sbjct: 398 DLIDEAGARLRIQRMTAPPDLREFDEQIAKLKMEKDAAIDAQDFETAARLRDDVTRIQAQ 457
Query: 315 ISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETL 374
+ +K + + ++ D+ VV E +I ++S+ TGIPV K++ +ES RLL+ME+ L
Sbjct: 458 RA---EKEEAWKQGDS---DIPAVVGEEEIAVVLSSSTGIPVFKLTEEESARLLRMEQEL 511
Query: 375 HKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSE 434
KR IGQ++AVKA++R+IRR R GLK+P RP SFIF+GP+GVGK+EL KAL + FG E
Sbjct: 512 GKRYIGQEDAVKALARSIRRTRAGLKDPKRPSGSFIFAGPSGVGKTELTKALTEFLFGDE 571
Query: 435 EAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDV 494
+A+I LDMSE+ E+HT S++ GSPPGYVGY EGGQLTE VRR+P++VVLFDEIEKAHPD+
Sbjct: 572 DALITLDMSEYSEKHTASRMFGSPPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHPDI 631
Query: 495 FNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYN 554
FN +LQIL++GRLTD++GR VDFKNT+++MT+N+GS I K G +GF DE SSY
Sbjct: 632 FNSLLQILDEGRLTDAQGRVVDFKNTVIVMTTNLGSRDISK-GVNLGFSRAGDEA-SSYE 689
Query: 555 RIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQV 614
++K+ V++ELKQ+FRPEFLNR+DE++VF QLT+ +++ I D+M+ ++ RL +D+ +++
Sbjct: 690 KMKAKVSDELKQHFRPEFLNRVDEIVVFHQLTQSDIERIVDLMVAQIESRLADRDMGIEL 749
Query: 615 TERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDG 671
T + V + G++P GARPLRRA+ R +ED +AEK+L E+ G V VDV +G
Sbjct: 750 TPAAKTLVAKRGFDPVLGARPLRRALQRDIEDVLAEKILFGELVAGQIVQVDVAEEG 806
>gi|355574982|ref|ZP_09044618.1| hypothetical protein HMPREF1008_00595 [Olsenella sp. oral taxon 809
str. F0356]
gi|354818458|gb|EHF02950.1| hypothetical protein HMPREF1008_00595 [Olsenella sp. oral taxon 809
str. F0356]
Length = 863
Score = 763 bits (1970), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/674 (57%), Positives = 507/674 (75%), Gaps = 20/674 (2%)
Query: 7 EAVGAGVGGGSSGNKMPT--------LEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQIL 58
+ VGA G G P+ LE+YG NLTKLA GKLDPV+GR ++ERV+Q+L
Sbjct: 156 QGVGAPFGQQQFGGSQPSQASGDASMLEQYGRNLTKLASNGKLDPVIGRDREVERVMQVL 215
Query: 59 GRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGE 118
RR KNNP ++G+PGVGKTA+ EGLAQ IASGDVPD + GK+V TLD+ LVAG+KYRGE
Sbjct: 216 ARRQKNNPLILGDPGVGKTAVVEGLAQLIASGDVPDILRGKQVWTLDVASLVAGSKYRGE 275
Query: 119 FEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATT 178
FEERLKK++ E+ +S E ILFIDE+HT+IGAGAAEG+IDAA+ILKP L+RGE+Q IGATT
Sbjct: 276 FEERLKKVIGEVMESKEDILFIDEMHTIIGAGAAEGSIDAASILKPPLSRGEIQVIGATT 335
Query: 179 LDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQ 238
+EYRKHIEKD ALERRFQPV V EPSV++T+ IL+GL++RYE HH +RYT+EAL +A
Sbjct: 336 AEEYRKHIEKDSALERRFQPVSVGEPSVEDTLAILRGLQDRYEKHHHVRYTEEALAAAVT 395
Query: 239 LSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDF 298
LS +Y+ DRFLPDKAID+IDEAG+R R+ LP E ++++EL ++ EK +A Q+F
Sbjct: 396 LSNRYVQDRFLPDKAIDIIDEAGARTRVHKTSLPPELAQVDEELARVKDEKAQAASAQEF 455
Query: 299 EKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVT-EVDIQHIVSAWTGIPVE 357
E+A LRDRE +L A K E+ A E D VV E DI +VS TG+PV
Sbjct: 456 EEAARLRDREKELSA-------KRDELEAAWRERLDANVVVVDEADIADVVSEITGVPVS 508
Query: 358 KVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGV 417
++ E+ +LL+ EE LH+RV+GQDEAV +S+AIRR+R LK+P RP SFIF GP+GV
Sbjct: 509 NLTEAEASKLLRAEEALHQRVVGQDEAVTKVSKAIRRSRSPLKDPRRPGGSFIFLGPSGV 568
Query: 418 GKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRR 477
GK+ELAK+LA + FGSE+A+I DMSEFME+H+VSKL+G+PPGYVGY EGG+LT+AVRRR
Sbjct: 569 GKTELAKSLAEFLFGSEDALISFDMSEFMEKHSVSKLVGAPPGYVGYDEGGELTKAVRRR 628
Query: 478 PYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGG 537
PY+VVLFDEIEKAHPDVFN++LQIL++GRLTD +GRTVDF NT++IMTSN+G+ I +
Sbjct: 629 PYSVVLFDEIEKAHPDVFNILLQILDEGRLTDGQGRTVDFSNTVIIMTSNIGAREIAQTA 688
Query: 538 RRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIM 597
+GF + S I+S V ELK+ FRPEFLNR+DE++VF+ L +++ I ++M
Sbjct: 689 -PMGFSAQGN-GGLSDKEIRSRVEGELKRLFRPEFLNRVDEIVVFKSLEAQQLRGIVELM 746
Query: 598 LKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREI 657
+ E+ +RL + + +++T+ R+ V +EG +P YGARPLRRAI L+ED +AE++L +
Sbjct: 747 VGELRNRLIGQGMSIELTDAARDFVAKEGTDPVYGARPLRRAIQTLIEDRLAEELLQGKW 806
Query: 658 KEGDSVIVDVDSDG 671
K GD IV VDSDG
Sbjct: 807 KAGD--IVLVDSDG 818
>gi|452910065|ref|ZP_21958747.1| ATP-dependent Clp protease [Kocuria palustris PEL]
gi|452834683|gb|EME37482.1| ATP-dependent Clp protease [Kocuria palustris PEL]
Length = 884
Score = 763 bits (1969), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/682 (57%), Positives = 521/682 (76%), Gaps = 13/682 (1%)
Query: 11 AGVGGGSSGNKMPT----LEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNP 66
AG G +SG P L+++G NLT A E +LDPV+GR ++ERV+Q+L RRTKNNP
Sbjct: 155 AGAGARTSGEGTPAGSAVLDQFGRNLTAAARESQLDPVIGRAREMERVMQVLSRRTKNNP 214
Query: 67 CLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKL 126
LIGEPGVGKTA+ EGLAQ I GDVP+T++ K + TLD+G LVAG++YRG+FEERLKK+
Sbjct: 215 VLIGEPGVGKTAVVEGLAQAIVRGDVPETLKDKHLYTLDLGSLVAGSRYRGDFEERLKKV 274
Query: 127 MEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHI 186
++EIK +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEYRKHI
Sbjct: 275 LKEIKSRGDIILFIDEIHTLVGAGAAEGAIDAASILKPMLARGELQTIGATTLDEYRKHI 334
Query: 187 EKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISD 246
EKD ALERRFQP++V EPS +I+ILKGLR++YE HH++ +DEAL +A S +YISD
Sbjct: 335 EKDAALERRFQPIQVDEPSEAHSIEILKGLRDKYEAHHRVSISDEALEAAVHQSARYISD 394
Query: 247 RFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRD 306
RFLPDKAIDLIDEAG+R+R++ P E +EL++ + ++ + K EA+ GQD+EKA LRD
Sbjct: 395 RFLPDKAIDLIDEAGARLRIKRMTAPPEIKELDERIAKVKQAKEEAIEGQDYEKAASLRD 454
Query: 307 REMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDR 366
+E L +S DK A E GD VT I ++SA TG+P+ +++ +ES R
Sbjct: 455 QEQKL---LSERDDK----DTAWREGGDQVAEVTPDVISDVLSAATGVPLYRLTDEESGR 507
Query: 367 LLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKAL 426
L++MEE LHKRV+GQ+EA+KA+SR+IRR R GLK+P RP SFIF+GPTGVGK+ELA++L
Sbjct: 508 LIRMEEELHKRVVGQEEAIKALSRSIRRTRAGLKDPKRPGGSFIFAGPTGVGKTELARSL 567
Query: 427 AAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDE 486
A + FG E+++I LDMSE+ E+HTVS+L G+PPGYVG+ EGGQLTE VRR+P++VVLFDE
Sbjct: 568 AEFLFGDEDSLITLDMSEYQEKHTVSRLFGAPPGYVGFEEGGQLTEKVRRKPFSVVLFDE 627
Query: 487 IEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDY 546
+EKAH D+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N+G+ I + +GF
Sbjct: 628 VEKAHQDLFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNLGTRDISR-SVPMGFQAGN 686
Query: 547 DEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLK 606
D ++Y R++ V +ELK++FRPEFLNR+DE++VF QL + E+ +I D+ + + +RL+
Sbjct: 687 DST-TNYERMQQRVNDELKEHFRPEFLNRVDEIVVFPQLEEKEIVQIVDLFVARLQERLR 745
Query: 607 TKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVD 666
+D+ + V++ ++ + + GY+P+ GARPLRR I R +ED+++EK+L +IKEG+ V VD
Sbjct: 746 EQDMSIVVSDAAKKVLAKRGYDPTMGARPLRRTIQREIEDTLSEKILFGDIKEGERVSVD 805
Query: 667 VDSDGNVTVLNGSSGAPESLAD 688
VD DG+ L SS A L D
Sbjct: 806 VDGDGDDAKLTFSSVAMSELPD 827
>gi|73748009|ref|YP_307248.1| ATP-dependent Clp protease, ATP-binding subunit [Dehalococcoides
sp. CBDB1]
gi|73659725|emb|CAI82332.1| ATP-dependent Clp protease, ATP-binding subunit [Dehalococcoides
sp. CBDB1]
Length = 824
Score = 763 bits (1969), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 372/657 (56%), Positives = 504/657 (76%), Gaps = 9/657 (1%)
Query: 17 SSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGK 76
++ ++ P L++ G +LT A+ GKLDPV+GR +IERVVQIL RRTKNNP LIGEPGVGK
Sbjct: 157 TTPSRTPQLDQLGFDLTAAAKAGKLDPVIGRSKEIERVVQILSRRTKNNPALIGEPGVGK 216
Query: 77 TAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEI 136
T+I EGLAQRI SGDVP+T+E K +I+LD+ LVAGTKYRGEFEERLKK++EEIK + I
Sbjct: 217 TSIVEGLAQRIVSGDVPETLEQKHIISLDVASLVAGTKYRGEFEERLKKVIEEIKNAGNI 276
Query: 137 ILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRF 196
ILFIDE HT++GAGAAEGA+DAANILKPSLARGE+Q IGATTLD++RK++E+D ALERRF
Sbjct: 277 ILFIDEFHTMVGAGAAEGAVDAANILKPSLARGEVQVIGATTLDDFRKYVERDAALERRF 336
Query: 197 QPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDL 256
QPV V EP++++T+ IL+G++ERYE HHKL +DEA+++AA ++ +YI DRFLPDKAIDL
Sbjct: 337 QPVLVEEPAIEDTLSILRGIKERYEEHHKLIISDEAIIAAANMAARYIPDRFLPDKAIDL 396
Query: 257 IDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQIS 316
+DEA SRVR++ P +E++ ++K A+ Q ++ A ELR+RE+ + +I
Sbjct: 397 VDEAASRVRIKKRTKPVSLKEMKAIEDSYRRDKEAALATQQYDYASELRERELQIAEKIR 456
Query: 317 ALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHK 376
+ D+ +TE PVV E DI +VS WTG+P+ +++ DE++RLL ME+ LH+
Sbjct: 457 RMEDEW------QTEQAMDKPVVGEEDIAQVVSMWTGVPLVQLTGDETERLLHMEDALHE 510
Query: 377 RVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEA 436
R+IGQ+EA+ IS+A+RRAR GLK+P PI +F+F GPTGVGK+ELA+ALA + FGSE++
Sbjct: 511 RIIGQEEAIVTISKAVRRARAGLKDPRHPIGNFVFLGPTGVGKTELARALAQFMFGSEDS 570
Query: 437 MIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFN 496
++RLDMSEFME+ VS+L+G+PPGYVGY EGGQLTEAVRR+ Y ++L DEIEKAHPDVFN
Sbjct: 571 LVRLDMSEFMEKFAVSRLVGAPPGYVGYDEGGQLTEAVRRKSYCLILLDEIEKAHPDVFN 630
Query: 497 MMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDE---KDSSY 553
++LQI +DG LTD+KGR VDF+NT++IMTSN+G+ +I KG IGF DE + +++
Sbjct: 631 ILLQIFDDGHLTDAKGRRVDFRNTIIIMTSNIGAELIRKGSGTIGFATQTDESKAQQTNF 690
Query: 554 NRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQ 613
+K + ELK+ FRPEFLNR+D ++VF L K +++ I D+MLK V ++ K I L+
Sbjct: 691 EHMKDKLLGELKKSFRPEFLNRIDSVVVFHSLNKEQIRSIVDLMLKSVVKQMAEKGIGLE 750
Query: 614 VTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSD 670
VTE ++ + ++GY+ YGARPLRR I ++ED ++E +L + K GD VIVD D
Sbjct: 751 VTESAKDLLGKKGYDEVYGARPLRRTIQTMIEDRLSEDLLRAKFKAGDKVIVDTAED 807
>gi|147668703|ref|YP_001213521.1| ATPase [Dehalococcoides sp. BAV1]
gi|146269651|gb|ABQ16643.1| ATPase AAA-2 domain protein [Dehalococcoides sp. BAV1]
Length = 824
Score = 763 bits (1969), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 372/657 (56%), Positives = 504/657 (76%), Gaps = 9/657 (1%)
Query: 17 SSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGK 76
++ ++ P L++ G +LT A+ GKLDPV+GR +IERVVQIL RRTKNNP LIGEPGVGK
Sbjct: 157 TTPSRTPQLDQLGFDLTAAAKAGKLDPVIGRSKEIERVVQILSRRTKNNPALIGEPGVGK 216
Query: 77 TAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEI 136
T+I EGLAQRI SGDVP+T+E K +I+LD+ LVAGTKYRGEFEERLKK++EEIK + I
Sbjct: 217 TSIVEGLAQRIVSGDVPETLEQKHIISLDVASLVAGTKYRGEFEERLKKVIEEIKNAGNI 276
Query: 137 ILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRF 196
ILFIDE HT++GAGAAEGA+DAANILKPSLARGE+Q IGATTLD++RK++E+D ALERRF
Sbjct: 277 ILFIDEFHTMVGAGAAEGAVDAANILKPSLARGEVQVIGATTLDDFRKYVERDAALERRF 336
Query: 197 QPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDL 256
QPV V EP++++T+ IL+G++ERYE HHKL +DEA+++AA ++ +YI DRFLPDKAIDL
Sbjct: 337 QPVLVEEPAIEDTLSILRGIKERYEEHHKLIISDEAIIAAANMAARYIPDRFLPDKAIDL 396
Query: 257 IDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQIS 316
+DEA SRVR++ P +E++ ++K A+ Q ++ A ELR+RE+ + +I
Sbjct: 397 VDEAASRVRIKKRTKPVSLKEMKAIEDSYRRDKEAALATQQYDYASELRERELQIAEKIR 456
Query: 317 ALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHK 376
+ D+ +TE PVV E DI +VS WTG+P+ +++ DE++RLL ME+ LH+
Sbjct: 457 RMEDEW------QTEQAMDKPVVGEEDIAQVVSMWTGVPLVQLTGDETERLLHMEDALHE 510
Query: 377 RVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEA 436
R+IGQ+EA+ IS+A+RRAR GLK+P PI +F+F GPTGVGK+ELA+ALA + FGSE++
Sbjct: 511 RIIGQEEAIVTISKAVRRARAGLKDPRHPIGNFVFLGPTGVGKTELARALAQFMFGSEDS 570
Query: 437 MIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFN 496
++RLDMSEFME+ VS+L+G+PPGYVGY EGGQLTEAVRR+ Y ++L DEIEKAHPDVFN
Sbjct: 571 LVRLDMSEFMEKFAVSRLVGAPPGYVGYDEGGQLTEAVRRKSYCLILLDEIEKAHPDVFN 630
Query: 497 MMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDE---KDSSY 553
++LQI +DG LTD+KGR VDF+NT++IMTSN+G+ +I KG IGF DE + +++
Sbjct: 631 ILLQIFDDGHLTDAKGRRVDFRNTIIIMTSNIGAELIRKGSGTIGFATQTDESKAQQTNF 690
Query: 554 NRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQ 613
+K + ELK+ FRPEFLNR+D ++VF L K +++ I D+MLK V ++ K I L+
Sbjct: 691 EHMKDKLLGELKKSFRPEFLNRIDSVVVFHSLNKEQIRSIVDLMLKSVVKQMAEKGIGLE 750
Query: 614 VTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSD 670
VTE ++ + ++GY+ YGARPLRR I ++ED ++E +L + K GD VIVD D
Sbjct: 751 VTESAKDLLGKKGYDEVYGARPLRRTIQTMIEDRLSEDLLRAKFKAGDKVIVDTAED 807
>gi|298345554|ref|YP_003718241.1| chaperone ATPase [Mobiluncus curtisii ATCC 43063]
gi|304391110|ref|ZP_07373062.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Mobiluncus
curtisii subsp. curtisii ATCC 35241]
gi|315656114|ref|ZP_07909005.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Mobiluncus
curtisii subsp. holmesii ATCC 35242]
gi|298235615|gb|ADI66747.1| ATPase with chaperone activity, ATP-binding subunit [Mobiluncus
curtisii ATCC 43063]
gi|304325993|gb|EFL93239.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Mobiluncus
curtisii subsp. curtisii ATCC 35241]
gi|315493116|gb|EFU82716.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Mobiluncus
curtisii subsp. holmesii ATCC 35242]
Length = 884
Score = 763 bits (1969), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/665 (57%), Positives = 513/665 (77%), Gaps = 19/665 (2%)
Query: 12 GVGGG-----SSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNP 66
GVGGG ++G L+++G NLT+ A E KLDPV+GR ++ERV+QIL RRTKNNP
Sbjct: 159 GVGGGRADNPNAGGNSAILDQFGRNLTQAARESKLDPVIGRTKEMERVMQILSRRTKNNP 218
Query: 67 CLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKL 126
L+GEPGVGKTA+ EGLAQ I GDVP+T++ K++ +LDMG LVAG++YRG+FEERLKK+
Sbjct: 219 VLVGEPGVGKTAVVEGLAQSIVRGDVPETLKDKQLYSLDMGSLVAGSRYRGDFEERLKKV 278
Query: 127 MEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHI 186
++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATT++EYRK+I
Sbjct: 279 LKEIRTRGDIILFIDEIHTLVGAGAAEGAIDAASILKPMLARGELQTIGATTIEEYRKYI 338
Query: 187 EKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISD 246
EKD ALERRFQPVKV EPSV+ET+ ILKGLR+RYE HH++ TD AL +AAQL+ +Y+SD
Sbjct: 339 EKDSALERRFQPVKVEEPSVEETVAILKGLRDRYESHHRVMITDAALAAAAQLADRYVSD 398
Query: 247 RFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRD 306
RFLPDKAIDL+DEAG+R+R++ P E +E+++++ + + K A+ QDFEKA +LRD
Sbjct: 399 RFLPDKAIDLVDEAGARLRIKRMTAPPELKEVDEKIAKTRQAKEAAIDAQDFEKAAQLRD 458
Query: 307 REMDL---KAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDE 363
E L +A + +G++ S++ VV E I +++ TGIPV K++ E
Sbjct: 459 EEKHLTEERAAKESQWRQGEDTSES---------VVDEEQIAEVLAMSTGIPVFKLTQAE 509
Query: 364 SDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELA 423
S +LL+ME+ LHKR+IGQDEAVKA+S++IRR R GLK+P RP SF+F+GPTGVGK+ELA
Sbjct: 510 SSKLLRMEDELHKRIIGQDEAVKAVSQSIRRTRAGLKDPKRPGGSFVFAGPTGVGKTELA 569
Query: 424 KALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVL 483
KALA + FG E A+++LDMSEF E+HT S+L GSPPGYVGY EGGQLTE VRR+P++VVL
Sbjct: 570 KALAEFLFGDENALVQLDMSEFSEKHTASRLFGSPPGYVGYDEGGQLTEKVRRKPFSVVL 629
Query: 484 FDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFD 543
FDE+EKAHPD+FN +LQ+LE+G LTDS+GR VDFKNT++IMT+N+G+ I K G GF
Sbjct: 630 FDEVEKAHPDIFNSLLQVLEEGHLTDSQGRLVDFKNTIIIMTTNLGTREINK-GVLTGFQ 688
Query: 544 LDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFD 603
E + Y R+K V EELKQ+FRPEFLNR+DE++VF QL K E+ +I D+M+ ++ D
Sbjct: 689 AS-GELATDYQRMKGKVQEELKQHFRPEFLNRVDEIVVFPQLEKGEILQIVDLMIAKLDD 747
Query: 604 RLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSV 663
R+ + + LQ+T R + +G++ + GARPLRRA+ R +ED ++EK+L E+ EG +V
Sbjct: 748 RMLDQGMALQITPAARALLAHKGFDKTLGARPLRRAVQREIEDVLSEKILFSELGEGQTV 807
Query: 664 IVDVD 668
VDV+
Sbjct: 808 TVDVE 812
>gi|289432006|ref|YP_003461879.1| ATPase AAA [Dehalococcoides sp. GT]
gi|452204378|ref|YP_007484507.1| ATP-dependent Clp protease, ATP-binding subunit ClpC
[Dehalococcoides mccartyi BTF08]
gi|288945726|gb|ADC73423.1| ATPase AAA-2 domain protein [Dehalococcoides sp. GT]
gi|452111434|gb|AGG07165.1| ATP-dependent Clp protease, ATP-binding subunit ClpC
[Dehalococcoides mccartyi BTF08]
Length = 824
Score = 763 bits (1969), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 372/657 (56%), Positives = 504/657 (76%), Gaps = 9/657 (1%)
Query: 17 SSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGK 76
++ ++ P L++ G +LT A+ GKLDPV+GR +IERVVQIL RRTKNNP LIGEPGVGK
Sbjct: 157 TAPSRTPQLDQLGFDLTAAAKAGKLDPVIGRSKEIERVVQILSRRTKNNPALIGEPGVGK 216
Query: 77 TAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEI 136
T+I EGLAQRI SGDVP+T+E K +I+LD+ LVAGTKYRGEFEERLKK++EEIK + I
Sbjct: 217 TSIVEGLAQRIVSGDVPETLEQKHIISLDVASLVAGTKYRGEFEERLKKVIEEIKNAGNI 276
Query: 137 ILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRF 196
ILFIDE HT++GAGAAEGA+DAANILKPSLARGE+Q IGATTLD++RK++E+D ALERRF
Sbjct: 277 ILFIDEFHTMVGAGAAEGAVDAANILKPSLARGEVQVIGATTLDDFRKYVERDAALERRF 336
Query: 197 QPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDL 256
QPV V EP++++T+ IL+G++ERYE HHKL +DEA+++AA ++ +YI DRFLPDKAIDL
Sbjct: 337 QPVLVEEPAIEDTLSILRGIKERYEEHHKLIISDEAIIAAANMAARYIPDRFLPDKAIDL 396
Query: 257 IDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQIS 316
+DEA SRVR++ P +E++ ++K A+ Q ++ A ELR+RE+ + +I
Sbjct: 397 VDEAASRVRIKKRTKPVSLKEMKAIEDSYRRDKEAALATQQYDYASELRERELQIAEKIR 456
Query: 317 ALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHK 376
+ D+ +TE PVV E DI +VS WTG+P+ +++ DE++RLL ME+ LH+
Sbjct: 457 RMEDEW------QTEQAMDKPVVGEEDIAQVVSMWTGVPLVQLTGDETERLLHMEDALHE 510
Query: 377 RVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEA 436
R+IGQ+EA+ IS+A+RRAR GLK+P PI +F+F GPTGVGK+ELA+ALA + FGSE++
Sbjct: 511 RIIGQEEAIVTISKAVRRARAGLKDPRHPIGNFVFLGPTGVGKTELARALAQFMFGSEDS 570
Query: 437 MIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFN 496
++RLDMSEFME+ VS+L+G+PPGYVGY EGGQLTEAVRR+ Y ++L DEIEKAHPDVFN
Sbjct: 571 LVRLDMSEFMEKFAVSRLVGAPPGYVGYDEGGQLTEAVRRKSYCLILLDEIEKAHPDVFN 630
Query: 497 MMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDE---KDSSY 553
++LQI +DG LTD+KGR VDF+NT++IMTSN+G+ +I KG IGF DE + +++
Sbjct: 631 ILLQIFDDGHLTDAKGRRVDFRNTIIIMTSNIGAELIRKGSGTIGFATQTDESKAQQTNF 690
Query: 554 NRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQ 613
+K + ELK+ FRPEFLNR+D ++VF L K +++ I D+MLK V ++ K I L+
Sbjct: 691 EHMKDKLLGELKKSFRPEFLNRIDSVVVFHSLNKEQIRSIVDLMLKSVVKQMAEKGIGLE 750
Query: 614 VTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSD 670
VTE ++ + ++GY+ YGARPLRR I ++ED ++E +L + K GD VIVD D
Sbjct: 751 VTESAKDLLGKKGYDEVYGARPLRRTIQTMIEDRLSEDLLRAKFKAGDKVIVDTAED 807
>gi|452202898|ref|YP_007483031.1| ATP-dependent Clp protease, ATP-binding subunit ClpC
[Dehalococcoides mccartyi DCMB5]
gi|452109957|gb|AGG05689.1| ATP-dependent Clp protease, ATP-binding subunit ClpC
[Dehalococcoides mccartyi DCMB5]
Length = 824
Score = 763 bits (1969), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 372/657 (56%), Positives = 504/657 (76%), Gaps = 9/657 (1%)
Query: 17 SSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGK 76
++ ++ P L++ G +LT A+ GKLDPV+GR +IERVVQIL RRTKNNP LIGEPGVGK
Sbjct: 157 TTPSRTPQLDQLGFDLTAAAKAGKLDPVIGRSKEIERVVQILSRRTKNNPALIGEPGVGK 216
Query: 77 TAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEI 136
T+I EGLAQRI SGDVP+T+E K +I+LD+ LVAGTKYRGEFEERLKK++EEIK + I
Sbjct: 217 TSIVEGLAQRIVSGDVPETLEQKHIISLDVASLVAGTKYRGEFEERLKKVIEEIKNAGNI 276
Query: 137 ILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRF 196
ILFIDE HT++GAGAAEGA+DAANILKPSLARGE+Q IGATTLD++RK++E+D ALERRF
Sbjct: 277 ILFIDEFHTMVGAGAAEGAVDAANILKPSLARGEVQVIGATTLDDFRKYVERDAALERRF 336
Query: 197 QPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDL 256
QPV V EP++++T+ IL+G++ERYE HHKL +DEA+++AA ++ +YI DRFLPDKAIDL
Sbjct: 337 QPVLVEEPAIEDTLSILRGIKERYEEHHKLIISDEAIIAAANMAARYIPDRFLPDKAIDL 396
Query: 257 IDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQIS 316
+DEA SRVR++ P +E++ ++K A+ Q ++ A ELR+RE+ + +I
Sbjct: 397 VDEAASRVRIKKRTKPVSLKEMKAIEDSYRRDKEAALATQQYDYASELRERELQIAEKIR 456
Query: 317 ALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHK 376
+ D+ +TE PVV E DI +VS WTG+P+ +++ DE++RLL ME+ LH+
Sbjct: 457 RMEDEW------QTEQAMDKPVVGEEDIAQVVSMWTGVPLVQLTGDETERLLHMEDALHE 510
Query: 377 RVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEA 436
R+IGQ+EA+ IS+A+RRAR GLK+P PI +F+F GPTGVGK+ELA+ALA + FGSE++
Sbjct: 511 RIIGQEEAIVTISKAVRRARAGLKDPRHPIGNFVFLGPTGVGKTELARALAQFMFGSEDS 570
Query: 437 MIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFN 496
++RLDMSEFME+ VS+L+G+PPGYVGY EGGQLTEAVRR+ Y ++L DEIEKAHPDVFN
Sbjct: 571 LVRLDMSEFMEKFAVSRLVGAPPGYVGYDEGGQLTEAVRRKSYCLILLDEIEKAHPDVFN 630
Query: 497 MMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDE---KDSSY 553
++LQI +DG LTD+KGR VDF+NT++IMTSN+G+ +I KG IGF DE + +++
Sbjct: 631 ILLQIFDDGHLTDAKGRRVDFRNTIIIMTSNIGAELIRKGSGTIGFATQTDESKAQQTNF 690
Query: 554 NRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQ 613
+K + ELK+ FRPEFLNR+D ++VF L K +++ I D+MLK V ++ K I L+
Sbjct: 691 EHMKDKLLGELKKSFRPEFLNRIDSVVVFHSLNKEQIRSIVDLMLKSVVKQMAEKGIGLE 750
Query: 614 VTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSD 670
VTE ++ + ++GY+ YGARPLRR I ++ED ++E +L + K GD VIVD D
Sbjct: 751 VTESAKDLLGKKGYDEVYGARPLRRTIQTMIEDRLSEDLLRAKFKAGDKVIVDTAED 807
>gi|270307500|ref|YP_003329558.1| ATP-dependent Clp protease ATP-binding subunit [Dehalococcoides sp.
VS]
gi|270153392|gb|ACZ61230.1| ATP-dependent Clp protease, ATP-binding subunit [Dehalococcoides
sp. VS]
Length = 824
Score = 763 bits (1969), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 372/657 (56%), Positives = 502/657 (76%), Gaps = 9/657 (1%)
Query: 17 SSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGK 76
++ ++ P L++ G +LT A GKLDPV+GR +IERVVQIL RRTKNNP LIGEPGVGK
Sbjct: 157 TTPSRTPQLDQLGFDLTAAARTGKLDPVIGRAKEIERVVQILSRRTKNNPALIGEPGVGK 216
Query: 77 TAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEI 136
T+I EGLAQRI SGDVP+T+E K +I+LD+ LVAGTKYRGEFEERLKK++EEIK + I
Sbjct: 217 TSIVEGLAQRIVSGDVPETLEQKHIISLDVASLVAGTKYRGEFEERLKKVIEEIKNAGNI 276
Query: 137 ILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRF 196
ILFIDE HT++GAGAAEGA+DAANILKPSLARGE+Q IGATTLD++RK++E+D ALERRF
Sbjct: 277 ILFIDEFHTMVGAGAAEGAVDAANILKPSLARGEVQVIGATTLDDFRKYVERDAALERRF 336
Query: 197 QPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDL 256
QPV V EP++++T+ IL+G++ERYE HHKL ++EA+ +AA ++ +YI DRFLPDKAIDL
Sbjct: 337 QPVLVEEPAIEDTLNILRGIKERYEEHHKLIISEEAIAAAANMAARYIPDRFLPDKAIDL 396
Query: 257 IDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQIS 316
+DEA SRVR++ P +E++ ++K A+ Q ++ A ELR+RE+ + +I
Sbjct: 397 VDEAASRVRIKKRTKPVSLKEMKAIEDSYRRDKEAALATQQYDYASELRERELQIAEKIR 456
Query: 317 ALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHK 376
+ D+ + E PVV E DI +VS WTG+P+ +++ DE++RLL MEE LH+
Sbjct: 457 RMEDEW------QNEQAMDKPVVGEEDIAQVVSMWTGVPLVQLTGDETERLLHMEEALHE 510
Query: 377 RVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEA 436
R+IGQ+EA+ IS+A+RRAR GLK+P PI +F+F GPTGVGK+ELA+ALA + FGSE+A
Sbjct: 511 RIIGQEEAIVTISKAVRRARAGLKDPRHPIGNFVFLGPTGVGKTELARALAQFMFGSEDA 570
Query: 437 MIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFN 496
++RLDMSEFME+ VS+L+G+PPGYVGY EGGQLTEAVRR+ Y ++L DEIEKAHPDVFN
Sbjct: 571 LVRLDMSEFMEKFAVSRLVGAPPGYVGYDEGGQLTEAVRRKSYCLILLDEIEKAHPDVFN 630
Query: 497 MMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDE---KDSSY 553
++LQI +DG LTD+KGR VDF+NT++IMTSN+G+ +I KG IGF DE + +++
Sbjct: 631 ILLQIFDDGHLTDAKGRRVDFRNTIIIMTSNIGAELIRKGSGTIGFATQTDESKAQQTNF 690
Query: 554 NRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQ 613
+K + ELK+ FRPEFLNR+D ++VF L K +++ I D+MLK V ++ K I L+
Sbjct: 691 EHMKDKLLGELKKSFRPEFLNRIDSVVVFHSLNKEQIRSIVDLMLKSVIKQMSEKGIGLE 750
Query: 614 VTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSD 670
VTE ++ + ++GY+ YGARPLRR I ++ED ++E +L + K GD VIVD+ D
Sbjct: 751 VTESAKDLLGKKGYDEVYGARPLRRTIQTMIEDRLSEDLLRAKFKAGDKVIVDIAED 807
>gi|227505957|ref|ZP_03936006.1| ATPase with chaperone activity, ATP-binding subunit
[Corynebacterium striatum ATCC 6940]
gi|227197479|gb|EEI77527.1| ATPase with chaperone activity, ATP-binding subunit
[Corynebacterium striatum ATCC 6940]
Length = 904
Score = 763 bits (1969), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 376/664 (56%), Positives = 514/664 (77%), Gaps = 17/664 (2%)
Query: 11 AGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIG 70
A G G N + L+++G NLT+ A++GKLDPVVGR +IER++Q+L RRTKNNP LIG
Sbjct: 176 APSGAGERSNSL-VLDQFGRNLTQAAKDGKLDPVVGRDSEIERIMQVLSRRTKNNPVLIG 234
Query: 71 EPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEI 130
EPGVGKT++ EGLA I +G VP+T++ K++ +LD+G LVAG++YRG+FEERLKK+++EI
Sbjct: 235 EPGVGKTSVVEGLALDIVNGKVPETLKDKQLYSLDLGSLVAGSRYRGDFEERLKKVLKEI 294
Query: 131 KQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDP 190
Q +IILFIDE+HTL+GAGAAEGAIDAA++LKP LARGELQ IGATTLDEYRKHIEKD
Sbjct: 295 NQRGDIILFIDEIHTLVGAGAAEGAIDAASLLKPKLARGELQTIGATTLDEYRKHIEKDA 354
Query: 191 ALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLP 250
ALERRFQPVKV EPS+D+TI ILKGLR++YE HH++ YTDEAL +AA LS +YI+DRFLP
Sbjct: 355 ALERRFQPVKVDEPSLDDTILILKGLRDKYEAHHRVSYTDEALKAAASLSDRYINDRFLP 414
Query: 251 DKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMD 310
DKA+DL+DEAG+R+R++ PE RE++ + ++ +EK A+ QDFEKA LRD+E
Sbjct: 415 DKAVDLLDEAGARMRIKRMTAPEGLREVDDRIAEVRREKEAAIDAQDFEKAAGLRDKERK 474
Query: 311 LKAQISALVDKGKEMSKAETE--AGDVGPV--VTEVDIQHIVSAWTGIPVEKVSTDESDR 366
L G+E ++ E + GD+ + V E I +++ WTGIPV K++ ES R
Sbjct: 475 L----------GEERAEKEKQWRTGDLEEIAEVGEEQIAEVLAHWTGIPVLKLTEKESSR 524
Query: 367 LLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKAL 426
LL ME+ LHKR+IGQDEAVKA+SRAIRR R GLK+P RP SFIF+GP+GVGK+EL+K+L
Sbjct: 525 LLHMEDELHKRIIGQDEAVKAVSRAIRRTRAGLKDPRRPSGSFIFAGPSGVGKTELSKSL 584
Query: 427 AAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDE 486
A + FGS++ +I++DM EF +R T S+L G+PPGYVGY EGGQLTE VRR+P++VVLFDE
Sbjct: 585 ANFLFGSDDDLIQIDMGEFHDRFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVVLFDE 644
Query: 487 IEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDY 546
IEKAH +++N +LQ+LEDGRLTD +GR VDFKNT+LI TSN+G+ I K +GF
Sbjct: 645 IEKAHKEIYNTLLQVLEDGRLTDGQGRIVDFKNTVLIFTSNLGTQDISK-AVGLGFSGSS 703
Query: 547 D-EKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRL 605
+ + D+ Y R+K+ V +ELK++FRPEFLNR+DE++VF QLT+ ++ E+ ++++ V +L
Sbjct: 704 EPDSDAQYERMKNKVNDELKKHFRPEFLNRIDEIVVFHQLTQEQIVEMVELLIGRVEKQL 763
Query: 606 KTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIV 665
+D+ +++T++ ++ + + G++P GARPLRR I R +ED ++EK+L EI G+ + V
Sbjct: 764 AERDMGIELTQKAKDLLAKRGFDPVLGARPLRRTIQREIEDQLSEKILFGEIGAGEIITV 823
Query: 666 DVDS 669
DV++
Sbjct: 824 DVEN 827
>gi|350272952|ref|YP_004884260.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Oscillibacter
valericigenes Sjm18-20]
gi|348597794|dbj|BAL01755.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Oscillibacter
valericigenes Sjm18-20]
Length = 816
Score = 763 bits (1969), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 376/649 (57%), Positives = 498/649 (76%), Gaps = 9/649 (1%)
Query: 24 TLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGL 83
TL E+ +LT A GKLDPV+GR +I+RV+QIL RRTKNNP LIGEPGVGKTAIAEGL
Sbjct: 169 TLREFTRDLTADARSGKLDPVIGRDAEIQRVIQILSRRTKNNPVLIGEPGVGKTAIAEGL 228
Query: 84 AQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEV 143
A++IA GDVPD + K++++LD+ +VAGTKYRGEFEER+KK ++E+KQ ++ILFIDE+
Sbjct: 229 ARKIALGDVPDELLDKRILSLDLSGMVAGTKYRGEFEERIKKALDEVKQDGDVILFIDEL 288
Query: 144 HTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPE 203
HT++GAG+AEGA+DAANI+KP+L RGE++C+GATTL+EYR++IEKD ALERRFQPV+V E
Sbjct: 289 HTIVGAGSAEGAVDAANIIKPALGRGEIRCLGATTLNEYRQYIEKDAALERRFQPVQVGE 348
Query: 204 PSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSR 263
PS T++ILKGLR RYE HH+L+ TD AL +A +LS +YI+DRFLPDKAIDL+DEA SR
Sbjct: 349 PSQKATLEILKGLRRRYEQHHRLQITDGALSAAVELSARYINDRFLPDKAIDLMDEAASR 408
Query: 264 VRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGK 323
VR+ + E + L++++ + K+K AV Q++EKA +LRD E + + Q+ DK +
Sbjct: 409 VRMEEEEPSPELKSLDEKIAALQKDKAAAVAAQNYEKAAQLRDIEKNYQEQVEMERDKRR 468
Query: 324 EMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDE 383
+ + PV E DI +V+ WTGIPV +++ E RLL ME+ LH RV+GQ E
Sbjct: 469 KHNSTHR------PVTAE-DIAAVVAEWTGIPVTRLTEGEESRLLHMEDQLHVRVVGQSE 521
Query: 384 AVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMS 443
AV A+SRAIRR RVGLK+P RPI SF+F GPTGVGK+EL KALA FG E AMIR+DMS
Sbjct: 522 AVTAVSRAIRRGRVGLKDPKRPIGSFLFLGPTGVGKTELCKALAESMFGDESAMIRIDMS 581
Query: 444 EFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILE 503
E+MERHTVS+LIGSPPGYVG+ EGGQLTE VRR+PY+VVLFDEIEKA+ DV+N++LQILE
Sbjct: 582 EYMERHTVSRLIGSPPGYVGHEEGGQLTEKVRRKPYSVVLFDEIEKANEDVWNILLQILE 641
Query: 504 DGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKD--SSYNRIKSLVT 561
DGR+TDS+GRTVDFKNT+++MTSNVG++ I G R+GFD K+ S+Y + K V
Sbjct: 642 DGRITDSQGRTVDFKNTVIVMTSNVGAASITSAGCRLGFDSGEAVKNETSAYEKGKERVM 701
Query: 562 EELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRER 621
+EL++ FRPEFLNR+D++IVF +LT+ ++ EIA MLK R+ ++L+ +
Sbjct: 702 DELRRTFRPEFLNRIDDIIVFHRLTQDDITEIARRMLKATEKRMAAMGVKLEADDAAICE 761
Query: 622 VVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSD 670
+ +EG++P YGARPLRRAI +ED++AE++L+ +K GD+ + D
Sbjct: 762 LAKEGFDPKYGARPLRRAIQNKVEDAVAEQLLSGGLKSGDTAHLTFADD 810
>gi|108803150|ref|YP_643087.1| ATPase [Rubrobacter xylanophilus DSM 9941]
gi|108764393|gb|ABG03275.1| ATPase AAA-2 [Rubrobacter xylanophilus DSM 9941]
Length = 837
Score = 762 bits (1968), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 372/655 (56%), Positives = 500/655 (76%), Gaps = 17/655 (2%)
Query: 20 NKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAI 79
++ PTL++ +LT++A +G+LDPV+GR +I RVV+IL RRTKNNP LIGE GVGKTAI
Sbjct: 185 SRTPTLDQVSRDLTRMARDGELDPVIGRAGEIARVVRILSRRTKNNPVLIGEAGVGKTAI 244
Query: 80 AEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDE-IIL 138
AEGLAQRI S DVP+ ++GK+V+ LD+G LVAGT++RG+FEER+K+L+ E+++ ++ IIL
Sbjct: 245 AEGLAQRIVSEDVPEVLKGKRVVALDVGALVAGTRFRGDFEERMKQLLNELQREEKNIIL 304
Query: 139 FIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQP 198
FIDE+HT++GAG AEGA+ A+N+LKP+LARGELQ +GATTLDEYRKH+EKDPALERRFQP
Sbjct: 305 FIDELHTIVGAGGAEGAVTASNMLKPALARGELQVVGATTLDEYRKHVEKDPALERRFQP 364
Query: 199 VKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLID 258
V V EP+VDETI IL GLR+RYE HH++R +DEA+++AAQLS +YI+DRFLPDKAIDL+D
Sbjct: 365 VLVEEPTVDETIAILFGLRDRYEAHHRVRISDEAIIAAAQLSERYITDRFLPDKAIDLLD 424
Query: 259 EAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISAL 318
EA + VRLR P + + +E+E+ + +K +AVR +D+E+A + + R LK ++
Sbjct: 425 EAAAEVRLRSTVPPVDLKRIEEEIASLENQKEDAVRAEDYERAAQYKQRIEQLKLELR-- 482
Query: 319 VDKGKEMSKAETEAGD---VGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLH 375
K E AG+ P V DI I+ WTGIP + +E++RLL +E LH
Sbjct: 483 -------EKQEGWAGNREANAPEVRREDIARILEEWTGIPATNIVQEEAERLLNLEAVLH 535
Query: 376 KRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEE 435
+RVIGQDEAV+A++ AIRRAR G+K+P RP+ SFIF GPTGVGK+ELA+ LA Y FG EE
Sbjct: 536 ERVIGQDEAVRAVAEAIRRARAGIKDPRRPVGSFIFLGPTGVGKTELARTLAEYLFGEEE 595
Query: 436 AMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVF 495
AM+R+DMSE+ E+HTVS+L+G+PPGYVGY E GQLTE +RRRPY+VVLFDEIEKAHPD+F
Sbjct: 596 AMVRIDMSEYQEKHTVSRLVGAPPGYVGYEEAGQLTEQIRRRPYSVVLFDEIEKAHPDIF 655
Query: 496 NMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNR 555
N +LQIL+DGRLTD++GRTVDF+N ++IMTSNVGS + R+ GF + +
Sbjct: 656 NTLLQILDDGRLTDAQGRTVDFRNAVIIMTSNVGSQHL-VSERQFGFTA---REGVDFRE 711
Query: 556 IKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVT 615
++ L+Q FRPEFLNR+DE+IVFR L+K +V +I DIML+ + L+++ I ++VT
Sbjct: 712 MERRARNALEQTFRPEFLNRVDEIIVFRPLSKEDVMQIVDIMLRRLNKHLESQRISVEVT 771
Query: 616 ERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSD 670
RE + EEGY+P +GARPL RAI R +E+ ++ ++ E GD+V+VD D D
Sbjct: 772 PEAREFLAEEGYDPKFGARPLSRAIRRHIENPLSSSIIEGEFSPGDTVVVDRDGD 826
>gi|221633020|ref|YP_002522245.1| ClpC ATPase [Thermomicrobium roseum DSM 5159]
gi|221155441|gb|ACM04568.1| ClpC ATPase [Thermomicrobium roseum DSM 5159]
Length = 817
Score = 762 bits (1967), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/654 (59%), Positives = 507/654 (77%), Gaps = 11/654 (1%)
Query: 20 NKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAI 79
K P L+ G +LT+ A GKLDPV+GR +IERV+QIL RRTKNNP LIGEPGVGKTAI
Sbjct: 158 TKTPYLDALGFDLTEAARLGKLDPVIGRHNEIERVMQILSRRTKNNPALIGEPGVGKTAI 217
Query: 80 AEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILF 139
EGLAQRI +GDVP+ ++GK+++ LD+G LVAGTKYRGEFEERLKK++ E+K+S ILF
Sbjct: 218 VEGLAQRIVAGDVPEPLQGKRLVALDIGALVAGTKYRGEFEERLKKIVAEVKESG-TILF 276
Query: 140 IDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPV 199
IDE+HTL+GAGAAEGA+DAANILKP+L+RGE+Q IGATTLDEYRK+IE+D ALERRFQPV
Sbjct: 277 IDELHTLVGAGAAEGAVDAANILKPALSRGEVQTIGATTLDEYRKYIERDAALERRFQPV 336
Query: 200 KVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDE 259
V EP+V+ETI+ILKG+RERYE HHKL+ +DEAL +AA L+ +Y++DRFLPDKAIDL+DE
Sbjct: 337 IVNEPTVEETIEILKGIRERYEEHHKLKISDEALHAAAVLAARYVTDRFLPDKAIDLVDE 396
Query: 260 AGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALV 319
A SRVR+ + P +E + L + +E + AV Q+FE A ELR+RE L +I L
Sbjct: 397 AASRVRMYRSASPPSLKEARRGLESLRRELDAAVASQEFELAAELRERERQLVHRIHELE 456
Query: 320 DKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVI 379
+E E G P+VTE DI +VS WTGIP+ ++ T+ES+RLL MEE LH+RVI
Sbjct: 457 QHWRE------EQGQEEPIVTEEDIAQVVSMWTGIPLTRLHTEESERLLHMEEALHERVI 510
Query: 380 GQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIR 439
GQDEA+ ++RA+RRAR GLK+P RPI +FIF GPTGVGK+ LA+ALA + FGSE+A+I+
Sbjct: 511 GQDEAISTLARAVRRARAGLKDPRRPIGTFIFLGPTGVGKTLLARALAEFMFGSEDALIK 570
Query: 440 LDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMML 499
+DMSEFMERHTVS+L+G+PPGY+GY EGGQLTEAVRR+PY+V+L DEIEKAHP+ FN++L
Sbjct: 571 IDMSEFMERHTVSRLVGAPPGYIGYEEGGQLTEAVRRKPYSVILLDEIEKAHPEAFNILL 630
Query: 500 QILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYD---EKDSSYNRI 556
QI+EDG LTD+KGR VDF+NT+LIMTSN+G+ +I++ G +GF + D + + Y +
Sbjct: 631 QIMEDGNLTDAKGRRVDFRNTILIMTSNIGAELIQREG-SLGFAVADDPTKKMQADYTAM 689
Query: 557 KSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTE 616
K V +LKQ FRPEFLNR+D +IVF LT V++I D+ LK + +L + I L+VT+
Sbjct: 690 KDKVLSQLKQTFRPEFLNRIDAVIVFHPLTPEHVRQIVDLELKRIRKQLAEQQIGLEVTD 749
Query: 617 RFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSD 670
++ + + GY+ +GARPLRR I L+ED +AE +LA K G +V+++V D
Sbjct: 750 AAKDLLAKRGYDRQFGARPLRRIIQNLIEDPLAEAILAGRFKPGSTVVINVRDD 803
>gi|240144490|ref|ZP_04743091.1| negative regulator of genetic competence ClpC/mecB [Roseburia
intestinalis L1-82]
gi|257203477|gb|EEV01762.1| negative regulator of genetic competence ClpC/mecB [Roseburia
intestinalis L1-82]
Length = 815
Score = 762 bits (1967), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 373/652 (57%), Positives = 510/652 (78%), Gaps = 11/652 (1%)
Query: 18 SGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKT 77
+ + P L +Y +LT LA EG LDP+VGRQ +I+RV+QIL RRTKNNPCLIGEPGVGKT
Sbjct: 163 TASDTPVLNQYSRDLTALAAEGVLDPLVGRQEEIDRVIQILSRRTKNNPCLIGEPGVGKT 222
Query: 78 AIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEII 137
AI EG+A+RI +G VPDT+ GK+V++LDM +VAG+KYRGEFEER+KK+++E++ + I+
Sbjct: 223 AIVEGIAERITTGMVPDTVAGKRVVSLDMSGIVAGSKYRGEFEERIKKVLQEVRAAGNIL 282
Query: 138 LFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQ 197
LFIDE+HT+IGAG AEGAIDA+NILKP+LARGELQ IGATT+DEYRK+IEKD ALERRFQ
Sbjct: 283 LFIDELHTIIGAGGAEGAIDASNILKPALARGELQLIGATTIDEYRKYIEKDAALERRFQ 342
Query: 198 PVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLI 257
PV V EPS +E +QIL+GLRE+YE HH+++ TD+A+ +A +LS +YI+DRFLPDKAIDL+
Sbjct: 343 PVTVEEPSEEEAVQILEGLREQYEKHHQVKITDDAVSAAVRLSARYINDRFLPDKAIDLM 402
Query: 258 DEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISA 317
DEA ++VRLR PEE EL + + +E E + D E A + ++ + + +++
Sbjct: 403 DEAAAKVRLRAGGKPEEVVELRHRINLLEEEMLEFLHDGDVEGAKQKKNEKEACEEELAK 462
Query: 318 LVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKR 377
+ K K+ S+++ VTE DI +VS WT IPV K++ E+ RL K+E TLHKR
Sbjct: 463 IQAKTKKDSRSKKLK------VTEDDIADVVSGWTKIPVRKIAEGEAARLRKLEATLHKR 516
Query: 378 VIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAM 437
VIGQ++AV A+++A+RR RVGLK+P RPI SF+F GPTGVGK+E++KALA FGSE++M
Sbjct: 517 VIGQEDAVSAVAKAVRRGRVGLKDPKRPIGSFLFLGPTGVGKTEISKALAEAVFGSEQSM 576
Query: 438 IRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNM 497
IR+DMSE+ME+H+VSK+IGSPPGYVG+ EGGQL+E VRR PY+V+LFDEIEKAHPDVFN+
Sbjct: 577 IRVDMSEYMEKHSVSKMIGSPPGYVGHEEGGQLSEKVRRNPYSVILFDEIEKAHPDVFNI 636
Query: 498 MLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGS-SVIEKGGRRIGFDLDYDEKDSSYNRI 556
+LQ+L+DG +TDS+GR VDFKNT++IMTSN G+ ++IE +++GF + DEK +Y+R+
Sbjct: 637 LLQVLDDGHITDSQGRKVDFKNTIIIMTSNAGAQAIIEP--KKLGFAVSDDEK-QNYDRM 693
Query: 557 KSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRL-KTKDIELQVT 615
K+ V EE+++ F+PEFLNR+DE IVFR L K ++K+I +MLKE+ DR K I L V
Sbjct: 694 KNSVMEEVRRIFKPEFLNRIDETIVFRALNKDDMKQIVALMLKELTDRCEKQMGIHLTVR 753
Query: 616 ERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDV 667
+ ++ +V++ Y+P YGARPLRR I +ED +AE++L+ ++K+ V+V +
Sbjct: 754 DSVKKHIVDKAYDPKYGARPLRRQIQNDIEDELAEEILSGKVKKDTEVVVTI 805
>gi|451945151|ref|YP_007465787.1| endopeptidase Clp ATP-binding chain C [Corynebacterium halotolerans
YIM 70093 = DSM 44683]
gi|451904538|gb|AGF73425.1| endopeptidase Clp ATP-binding chain C [Corynebacterium halotolerans
YIM 70093 = DSM 44683]
Length = 884
Score = 762 bits (1967), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 372/650 (57%), Positives = 509/650 (78%), Gaps = 16/650 (2%)
Query: 24 TLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGL 83
L+++G NLT+ A++GKLDPVVGR +IER++Q+L RRTKNNP LIGEPGVGKTA+ EGL
Sbjct: 170 VLDQFGRNLTQAAKDGKLDPVVGRGKEIERIMQVLSRRTKNNPVLIGEPGVGKTAVVEGL 229
Query: 84 AQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEV 143
A I +G VP+T++ K+V +LD+G LVAG++YRG+FEERLKK+++EI Q +IILFIDE+
Sbjct: 230 ALDIVNGKVPETLKDKQVYSLDLGSLVAGSRYRGDFEERLKKVLKEINQRGDIILFIDEI 289
Query: 144 HTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPE 203
HTL+GAGAAEGAIDAA++LKP LARGELQ IGATTLDEYRKHIEKD ALERRFQPV+VPE
Sbjct: 290 HTLVGAGAAEGAIDAASLLKPKLARGELQTIGATTLDEYRKHIEKDAALERRFQPVQVPE 349
Query: 204 PSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSR 263
PSV+ +++ILKGLR++YE HH++ TD AL +AAQL+ +YI+DRFLPDKA+DLIDEAG+R
Sbjct: 350 PSVELSVEILKGLRDKYEAHHRVSITDGALTAAAQLADRYINDRFLPDKAVDLIDEAGAR 409
Query: 264 VRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGK 323
+R++ PE RE+++ + + +EK A+ QDFEKA LRD+E L G+
Sbjct: 410 MRIKRMTAPEGLREIDERIADVRREKEAAIDAQDFEKAAGLRDKERKL----------GE 459
Query: 324 EMSKAETE--AGDVGPV--VTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVI 379
E S+ E + +GD+ + V E I ++ AWTGIPV K++ ES+RLL ME+ LHKR+I
Sbjct: 460 ERSEKEKQWRSGDLEEIAEVGEEQIAEVLGAWTGIPVFKLTESESNRLLNMEDELHKRII 519
Query: 380 GQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIR 439
GQD+AVKA+SRAIRR R GLK+P RP SFIF+GP+GVGK+EL+KALA + FG ++++I+
Sbjct: 520 GQDDAVKAVSRAIRRTRAGLKDPKRPSGSFIFAGPSGVGKTELSKALAEFLFGDDDSLIQ 579
Query: 440 LDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMML 499
+DM E+ +R T S+L G+PPGYVGY EGGQLTE VRR+P++VVLFDEIEKAH +++N +L
Sbjct: 580 IDMGEYHDRFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHKEIYNTLL 639
Query: 500 QILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFD-LDYDEKDSSYNRIKS 558
Q+LEDGRLTD +GR VDFKNT+LI TSN+G+ I K +GF + + D+ Y+R+K+
Sbjct: 640 QVLEDGRLTDGQGRVVDFKNTVLIFTSNLGTQDISK-AVGMGFTGSNETDSDAQYDRMKN 698
Query: 559 LVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERF 618
V +ELK++FRPEFLNR+DE++VF QLT+ ++ + ++++ V L KD+ +++T++
Sbjct: 699 KVNDELKKHFRPEFLNRIDEIVVFHQLTREQIVAMVELLIGRVSKALAEKDMAVELTDKA 758
Query: 619 RERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVD 668
+ + + G++P GARPLRR I R +ED+M+EK+L E+ G+ V VDV+
Sbjct: 759 KNLLAKRGFDPVLGARPLRRTIQREIEDTMSEKILFGELGAGEIVTVDVE 808
>gi|160881583|ref|YP_001560551.1| ATPase [Clostridium phytofermentans ISDg]
gi|160430249|gb|ABX43812.1| ATPase AAA-2 domain protein [Clostridium phytofermentans ISDg]
Length = 824
Score = 762 bits (1967), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/668 (56%), Positives = 508/668 (76%), Gaps = 19/668 (2%)
Query: 3 GESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRT 62
E + A G G G S+ PTL++Y NLT+ A+EGKLDPV+GR+ +I RV+QIL RRT
Sbjct: 151 NEFSNAKGKGKGKSST----PTLDQYSRNLTEYAKEGKLDPVIGRENEINRVIQILSRRT 206
Query: 63 KNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEER 122
KNNPCL+GEPGVGKTAIAEGLA +I GDVPDTI+ K+V+TLD+ +VAG+KYRGEFEER
Sbjct: 207 KNNPCLVGEPGVGKTAIAEGLALKIVEGDVPDTIKDKRVVTLDLSGMVAGSKYRGEFEER 266
Query: 123 LKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEY 182
+KK++ E+ ++LF+DE+HT+IGAG AEGAIDA+NILKPSLARGELQ IGATT +EY
Sbjct: 267 IKKVIAEVIYDGNVLLFLDELHTIIGAGGAEGAIDASNILKPSLARGELQLIGATTREEY 326
Query: 183 RKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQ 242
RK+IEKD ALERRFQPV V EPS DETI+IL GLR YE HH + TD+A+++A +LS +
Sbjct: 327 RKYIEKDAALERRFQPVVVEEPSEDETIKILMGLRSSYESHHNVVITDDAVIAAVKLSKR 386
Query: 243 YISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAG 302
Y++DR+LPDKAIDL+DEA S+VRL + + ++LE+++ Q+ +K EA++ + FEKA
Sbjct: 387 YLNDRYLPDKAIDLMDEAASKVRLSTYAVSPKIKQLEEKIAQLEADKEEAIKAEAFEKAS 446
Query: 303 ELR---DREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 359
E++ DR D + +K +E +K +VTE +I ++S WT IPV K+
Sbjct: 447 EIKKKQDRARDTLNRQKIEHEKAREENKL---------MVTEGEIAEVISGWTKIPVRKL 497
Query: 360 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 419
+ES+RL+K+E LH+RV+GQ EAV A+++AIRR RVGLK+PNRPI SF+F GPTGVGK
Sbjct: 498 EEEESERLMKLEGILHERVVGQSEAVSAVAKAIRRGRVGLKDPNRPIGSFLFLGPTGVGK 557
Query: 420 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 479
+EL+KALA FGSE +MIR+DMSE+ME+H+VSK+IGSPPGYVGY EGGQL+E VRR PY
Sbjct: 558 TELSKALAEAMFGSENSMIRVDMSEYMEKHSVSKMIGSPPGYVGYDEGGQLSEKVRRNPY 617
Query: 480 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 539
+V+LFDEIEKAHPDVFN++LQ+L+DG +TD++GR V FKNT++IMTSN G+ I ++
Sbjct: 618 SVILFDEIEKAHPDVFNILLQVLDDGHITDAQGRKVSFKNTIIIMTSNAGAQSI-ISPKK 676
Query: 540 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 599
+GF DEK + YNR+K V +E+K+ F+PEF+NR+DE+IVF LT+ ++K I IML
Sbjct: 677 LGFTSVVDEK-ADYNRMKEGVMDEVKRIFKPEFINRIDEIIVFHSLTREDIKNIVRIMLA 735
Query: 600 EVFDRLKTK-DIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIK 658
+ R + + D++L + E + + E+G++ YGARP+RRAI +ED +AE++L ++
Sbjct: 736 TIEKRCEQQMDLKLTIEESVIDFISEKGFDDKYGARPIRRAIQSYIEDKLAEEILEGKVS 795
Query: 659 EGDSVIVD 666
GD V VD
Sbjct: 796 SGDFVAVD 803
>gi|340793465|ref|YP_004758928.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
variabile DSM 44702]
gi|340533375|gb|AEK35855.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
variabile DSM 44702]
Length = 874
Score = 762 bits (1967), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/701 (54%), Positives = 520/701 (74%), Gaps = 19/701 (2%)
Query: 5 STEAVGAGVGGGSSGNKMPT-----------LEEYGTNLTKLAEEGKLDPVVGRQPQIER 53
S E GAGVG G P+ L+++G NLT+ A++GKLDPVVGR +IER
Sbjct: 156 SDEPAGAGVGPGDGAPSAPSGKPGQKSNSLVLDQFGRNLTQAAKDGKLDPVVGRGKEIER 215
Query: 54 VVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGT 113
++Q+L RRTKNNP LIGEPGVGKTA+ EGLA I +G VP+T++ K++ +LD+G LVAG+
Sbjct: 216 IMQVLSRRTKNNPVLIGEPGVGKTAVVEGLALDIVNGKVPETLKDKQLYSLDLGSLVAGS 275
Query: 114 KYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQC 173
+YRG+FEERLKK+++EI Q +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ
Sbjct: 276 RYRGDFEERLKKVLKEINQRGDIILFIDEIHTLVGAGAAEGAIDAASILKPKLARGELQT 335
Query: 174 IGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEAL 233
IGATTLDEYRKHIEKD ALERRFQPV+VPEPSV+ T++ILKGLR+RYE HH++ TD AL
Sbjct: 336 IGATTLDEYRKHIEKDAALERRFQPVQVPEPSVEMTVEILKGLRDRYEAHHRVSITDGAL 395
Query: 234 VSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAV 293
+AA+LS +YI+DRFLPDKA+DLIDEAG+R+R+R P+ ++++ ++ ++ + K A+
Sbjct: 396 AAAARLSDRYINDRFLPDKAVDLIDEAGARMRIRRMTAPKAIQDVDDKIAEVRRAKEAAI 455
Query: 294 RGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTG 353
QDFEKA LRD E L + + KE E DV + E +I ++ AWTG
Sbjct: 456 DDQDFEKAASLRDDERQLSEERAE-----KEKQWRAGELDDVAE-IGEQEIAEVLGAWTG 509
Query: 354 IPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSG 413
IPV +++ +E+ RLL ME+ LH+R+IGQ++AVKA+SRAIRR R GLK+P RP SFIF+G
Sbjct: 510 IPVVQLTEEETTRLLHMEDELHERIIGQEDAVKAVSRAIRRTRAGLKDPKRPSGSFIFAG 569
Query: 414 PTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEA 473
P+GVGK+EL+KALA + FG E+++I +DM EF ++ T S+L G+PPGYVGY EGGQLTE
Sbjct: 570 PSGVGKTELSKALAEFLFGDEDSLISIDMGEFHDKFTASRLFGAPPGYVGYDEGGQLTEK 629
Query: 474 VRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVI 533
VRR+P++VVLFDEIEKAH +++N +LQ+LE+GRLTD +GR VDFKNT+LI TSN+G+ I
Sbjct: 630 VRRKPFSVVLFDEIEKAHSEIYNTLLQVLEEGRLTDGQGRVVDFKNTVLIFTSNLGTRDI 689
Query: 534 EKG-GRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKE 592
K G + DEK Y+R+KS V +ELK++FRPEFLNR+D+++VF QLT+ ++ E
Sbjct: 690 SKAVGMGFSSTGESDEK-GQYDRMKSKVNDELKKHFRPEFLNRIDDIVVFHQLTQAQIVE 748
Query: 593 IADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKM 652
+ D++L + L KD+ L+V+++ ++ + + G++P GARPLRR I R +ED ++E++
Sbjct: 749 MVDLLLGRLRKALSDKDMALEVSDKAKDLLAKRGFDPVLGARPLRRTIQREIEDHLSEEI 808
Query: 653 LAREIKEGDSVIVDVDSDGNVTVLNGSSGAPESLADPLPVV 693
L + G+ V VDVD+ G++ S P PVV
Sbjct: 809 LFGNVASGEIVTVDVDNWDGGPRTEGATFVFGSRPKPAPVV 849
>gi|315656011|ref|ZP_07908909.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Mobiluncus
curtisii ATCC 51333]
gi|315490075|gb|EFU79702.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Mobiluncus
curtisii ATCC 51333]
Length = 884
Score = 762 bits (1967), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/665 (57%), Positives = 513/665 (77%), Gaps = 19/665 (2%)
Query: 12 GVGGG-----SSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNP 66
GVGGG +SG L+++G NLT+ A E KLDPV+GR ++ERV+QIL RRTKNNP
Sbjct: 159 GVGGGRADNPNSGGNSAILDQFGRNLTQAARESKLDPVIGRTKEMERVMQILSRRTKNNP 218
Query: 67 CLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKL 126
L+GEPGVGKTA+ EGLAQ I GDVP+T++ K++ +LDMG LVAG++YRG+FEERLKK+
Sbjct: 219 VLVGEPGVGKTAVVEGLAQSIVRGDVPETLKDKQLYSLDMGSLVAGSRYRGDFEERLKKV 278
Query: 127 MEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHI 186
++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATT++EYRK+I
Sbjct: 279 LKEIRTRGDIILFIDEIHTLVGAGAAEGAIDAASILKPMLARGELQTIGATTIEEYRKYI 338
Query: 187 EKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISD 246
EKD ALERRFQPVKV EPSV+ET+ ILKGLR+RYE HH++ TD AL +AAQL+ +Y+SD
Sbjct: 339 EKDSALERRFQPVKVEEPSVEETVAILKGLRDRYESHHRVMITDAALAAAAQLADRYVSD 398
Query: 247 RFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRD 306
RFLPDKAIDL+DEAG+R+R++ P E +E+++++ + + K A+ QDFEKA +LRD
Sbjct: 399 RFLPDKAIDLVDEAGARLRIKRMTAPPELKEVDEKIAKTRQAKEAAIDAQDFEKAAQLRD 458
Query: 307 REMDL---KAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDE 363
E L +A + +G++ S++ VV E I +++ TGIPV K++ E
Sbjct: 459 EEKHLTEERAAKESQWRQGEDTSES---------VVDEEQIAEVLAMSTGIPVFKLTQAE 509
Query: 364 SDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELA 423
S +LL+ME+ LHKR+IGQD+AVKA+S++IRR R GLK+P RP SF+F+GPTGVGK+ELA
Sbjct: 510 SSKLLRMEDELHKRIIGQDDAVKAVSQSIRRTRAGLKDPKRPGGSFVFAGPTGVGKTELA 569
Query: 424 KALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVL 483
KALA + FG E A+++LDMSEF E+HT S+L GSPPGYVGY EGGQLTE VRR+P++VVL
Sbjct: 570 KALAEFLFGDENALVQLDMSEFSEKHTASRLFGSPPGYVGYDEGGQLTEKVRRKPFSVVL 629
Query: 484 FDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFD 543
FDE+EKAHPD+FN +LQ+LE+G LTDS+GR VDFKNT++IMT+N+G+ I K G GF
Sbjct: 630 FDEVEKAHPDIFNSLLQVLEEGHLTDSQGRLVDFKNTIIIMTTNLGTREINK-GVLTGFQ 688
Query: 544 LDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFD 603
E + Y R+K V EELKQ+FRPEFLNR+DE++VF QL K E+ +I D+M+ ++ D
Sbjct: 689 AS-GELATDYQRMKGKVQEELKQHFRPEFLNRVDEIVVFPQLEKGEILQIVDLMIAKLDD 747
Query: 604 RLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSV 663
R+ + + LQ+T R + +G++ + GARPLRRA+ R +ED ++EK+L E+ EG +V
Sbjct: 748 RMLDQGMALQLTPAARALLAHKGFDKTLGARPLRRAVQREIEDVLSEKILFSELGEGQTV 807
Query: 664 IVDVD 668
VDV+
Sbjct: 808 TVDVE 812
>gi|385801820|ref|YP_005838223.1| negative regulator of genetic competence ClpC/MecB [Gardnerella
vaginalis HMP9231]
gi|333393443|gb|AEF31361.1| negative regulator of genetic competence ClpC/MecB [Gardnerella
vaginalis HMP9231]
Length = 829
Score = 762 bits (1967), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/647 (57%), Positives = 508/647 (78%), Gaps = 8/647 (1%)
Query: 25 LEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLA 84
L+++G NLT AE+GKLDPV+GR +IERV+ +L RRTKNNP LIGEPGVGKTA+ EGLA
Sbjct: 175 LDQFGRNLTTEAEQGKLDPVIGRSKEIERVMVVLSRRTKNNPVLIGEPGVGKTAVVEGLA 234
Query: 85 QRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVH 144
Q+I +GDVP+T++GK+V +LD+G +VAG++YRG+FEERLKK+++EIK +I+LFIDE+H
Sbjct: 235 QKIVAGDVPETLKGKQVYSLDLGSMVAGSRYRGDFEERLKKVLKEIKTRGDIVLFIDEIH 294
Query: 145 TLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEP 204
T++GAG+A+GA+ A+++LKP LARGELQ IGATT DEYRK+IEKD ALERRFQP++V EP
Sbjct: 295 TIVGAGSADGALGASDMLKPMLARGELQTIGATTTDEYRKYIEKDAALERRFQPIQVQEP 354
Query: 205 SVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRV 264
S+ ETI+ILKGLR RYE HH + TD AL SAA++S +YI DR LPDKAIDLIDEAG+R+
Sbjct: 355 SIAETIEILKGLRARYENHHHVTITDAALQSAAEMSARYIQDRNLPDKAIDLIDEAGARL 414
Query: 265 RLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKE 324
R++ P E +EL+ ++ +++++K+EA++ QDFEKA +LRD + L+ + K KE
Sbjct: 415 RIKRLTEPPELKELDSKISKLSEKKDEAIKNQDFEKAADLRDEQEKLEEE-----RKNKE 469
Query: 325 MSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEA 384
+ E E+ +V VV E I +VS TGIPV K++ ES +LL ME LHKR+IGQDEA
Sbjct: 470 QAWREGES-NVNMVVDEDVIASVVSNTTGIPVVKLTQAESKKLLGMEAELHKRIIGQDEA 528
Query: 385 VKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSE 444
V A+SR+IRRARVGLK+P RP SFIF+GPTGVGK+ELAK LA + F ++A+IR+DMSE
Sbjct: 529 VSALSRSIRRARVGLKDPKRPSGSFIFAGPTGVGKTELAKTLAQFLFDDDDALIRVDMSE 588
Query: 445 FMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILED 504
F E++ S+L G+PPGYVGY EGG+LTE VRR+P++VVLFDEIEKAHPD+FN +LQ+L+D
Sbjct: 589 FAEKYAASRLFGAPPGYVGYEEGGELTEKVRRKPFSVVLFDEIEKAHPDIFNTLLQVLDD 648
Query: 505 GRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEEL 564
G LTD +GR VDFKNT++I+T+N+G+ I K GF L + D+SY R+K V EL
Sbjct: 649 GHLTDGQGRKVDFKNTIIILTTNLGTRDIAKSA-NTGFSLG-NNADASYQRMKDQVNSEL 706
Query: 565 KQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVE 624
K+ FRPEFLNRLD+ IVFRQLT+ EV++I D+ +K + DRL + + L++T+ + + +
Sbjct: 707 KRQFRPEFLNRLDDTIVFRQLTEPEVRQIVDLDVKHLNDRLFERHMTLELTDAAKNLLAQ 766
Query: 625 EGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDG 671
+G++P GARPLRR I R +ED+++EK+L ++ +G+ V VD + +G
Sbjct: 767 KGFDPLLGARPLRRVIQRDIEDAISEKILLGDLTDGERVEVDAEGEG 813
>gi|291538077|emb|CBL11188.1| ATPases with chaperone activity, ATP-binding subunit [Roseburia
intestinalis XB6B4]
Length = 815
Score = 761 bits (1966), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/652 (57%), Positives = 509/652 (78%), Gaps = 11/652 (1%)
Query: 18 SGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKT 77
+ + P L +Y +LT LA EG LDP+VGRQ +I RV+QIL RRTKNNPCLIGEPGVGKT
Sbjct: 163 TASDTPVLNQYSRDLTALAAEGVLDPLVGRQEEIGRVIQILSRRTKNNPCLIGEPGVGKT 222
Query: 78 AIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEII 137
AI EG+A+RI +G VPDT+ GK+V++LDM +VAG+KYRGEFEER+KK+++E++ + I+
Sbjct: 223 AIVEGIAERITTGMVPDTVAGKRVVSLDMSGIVAGSKYRGEFEERIKKVLQEVRAAGNIL 282
Query: 138 LFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQ 197
LFIDE+HT+IGAG AEGAIDA+NILKP+LARGELQ IGATT+DEYRK+IEKD ALERRFQ
Sbjct: 283 LFIDELHTIIGAGGAEGAIDASNILKPALARGELQLIGATTIDEYRKYIEKDAALERRFQ 342
Query: 198 PVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLI 257
PV V EPS +E +QIL+GLRE+YE HH+++ TD+A+ +A +LS +YI+DRFLPDKAIDL+
Sbjct: 343 PVTVEEPSEEEAVQILEGLREQYEKHHQVKITDDAVSAAVRLSARYINDRFLPDKAIDLM 402
Query: 258 DEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISA 317
DEA ++VRLR PEE EL + + +E E + D E A + ++ + + +++
Sbjct: 403 DEAAAKVRLRAGGKPEEVVELRHRINLLEEEMLEFLHDGDVEGAKQKKNEKEACEEELAK 462
Query: 318 LVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKR 377
+ K K+ S+++ VTE DI +VS WT IPV K++ E+ RL K+E TLHKR
Sbjct: 463 IQAKTKKDSRSKKLK------VTEDDIADVVSGWTKIPVRKIAEGEAARLRKLEATLHKR 516
Query: 378 VIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAM 437
VIGQ++AV A+++A+RR RVGLK+P RPI SF+F GPTGVGK+E++KALA FGSE++M
Sbjct: 517 VIGQEDAVSAVAKAVRRGRVGLKDPKRPIGSFLFLGPTGVGKTEISKALAEAVFGSEQSM 576
Query: 438 IRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNM 497
IR+DMSE+ME+H+VSK+IGSPPGYVG+ EGGQL+E VRR PY+V+LFDEIEKAHPDVFN+
Sbjct: 577 IRVDMSEYMEKHSVSKMIGSPPGYVGHEEGGQLSEKVRRNPYSVILFDEIEKAHPDVFNI 636
Query: 498 MLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGS-SVIEKGGRRIGFDLDYDEKDSSYNRI 556
+LQ+L+DG +TDS+GR VDFKNT++IMTSN G+ ++IE +++GF + DEK +Y+R+
Sbjct: 637 LLQVLDDGHITDSQGRKVDFKNTIIIMTSNAGAQAIIEP--KKLGFAVSDDEK-QNYDRM 693
Query: 557 KSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRL-KTKDIELQVT 615
K+ V EE+++ F+PEFLNR+DE IVFR L K ++K+I +MLKE+ DR K I L V
Sbjct: 694 KNSVMEEVRRIFKPEFLNRIDETIVFRALNKDDMKQIVALMLKELTDRCEKQMGIHLTVR 753
Query: 616 ERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDV 667
+ ++ +VE+ Y+P YGARPLRR I +ED +AE++L+ ++K+ V+V +
Sbjct: 754 DSVKKHIVEKAYDPKYGARPLRRQIQNDIEDELAEEILSGKVKKDTEVVVTI 805
>gi|238916634|ref|YP_002930151.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Eubacterium
eligens ATCC 27750]
gi|238871994|gb|ACR71704.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Eubacterium
eligens ATCC 27750]
Length = 820
Score = 761 bits (1966), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 369/665 (55%), Positives = 513/665 (77%), Gaps = 10/665 (1%)
Query: 16 GSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVG 75
G+ TL++Y +LT++A EG+LDPV+GR+ +I+RV+QIL RRTKNNPCLIGEPGVG
Sbjct: 161 GNDKKSTATLDQYSRDLTQMAREGRLDPVIGREEEIQRVIQILSRRTKNNPCLIGEPGVG 220
Query: 76 KTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDE 135
KTAIAEGLA RI G+VP+TI+ K+++TLD+ +VAG+KYRGEFEER+KK++ E+K +
Sbjct: 221 KTAIAEGLAARIVEGNVPETIKDKRLLTLDLSGMVAGSKYRGEFEERIKKVIAEVKNAGN 280
Query: 136 IILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERR 195
++LF+DE+HT+IGAG AEGAIDA+NILKPSLARGE+Q IGATTL+EYRKHIEKD ALERR
Sbjct: 281 VLLFLDEIHTIIGAGGAEGAIDASNILKPSLARGEIQLIGATTLEEYRKHIEKDAALERR 340
Query: 196 FQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAID 255
FQPVKV EP+ +E IQIL+GL+ RYE HH + TDEA+V+A +LS +YI+DRFLPDKAID
Sbjct: 341 FQPVKVEEPTAEEAIQILRGLKGRYEEHHHVTITDEAVVAAVKLSKRYINDRFLPDKAID 400
Query: 256 LIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQI 315
LIDEA S+ RL +P+E + LE ++ Q+TK+K EA++ + +E+AGE++ +++ K Q+
Sbjct: 401 LIDEASSKTRLDAYVMPDEIKTLEAQIEQLTKDKEEAIKSEAYEQAGEIKKKQLKKKEQL 460
Query: 316 SALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLH 375
+ + ++ +V E +I +VS WT IPV++++ ES+RL+K+EETLH
Sbjct: 461 EKMTKQWQDSINKNN------LIVDEDEIASVVSTWTKIPVQRIAQAESERLMKLEETLH 514
Query: 376 KRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEE 435
RVIGQDEAV A+++AIRR RVGLK+P+RPI SF+F GPTGVGK+EL+KALA FG+E
Sbjct: 515 NRVIGQDEAVAAVAKAIRRGRVGLKDPDRPIGSFLFLGPTGVGKTELSKALADAMFGTEN 574
Query: 436 AMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVF 495
++IR+DMSEFME+HTVSKLIGSPPGYVGY EGGQL+E VRR PY+V+LFDE+EKAHPDVF
Sbjct: 575 SLIRVDMSEFMEKHTVSKLIGSPPGYVGYDEGGQLSEKVRRNPYSVILFDEVEKAHPDVF 634
Query: 496 NMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNR 555
N++LQ+L+DG +TDS GR +DFKNT++IMTSN G+ I + +GF E+ ++
Sbjct: 635 NVLLQVLDDGHITDSTGRVIDFKNTIIIMTSNAGAENI-VSPKSLGFSSGMTEQ-QNHEE 692
Query: 556 IKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDR-LKTKDIELQV 614
+K V +E+K+ F+PEF+NR+D+++VF L K ++ +I DIM+ V R ++ + +++
Sbjct: 693 MKGKVMDEVKRIFKPEFINRIDDIVVFHVLGKEQIAQIVDIMIANVNKRIMEQMKLSIEL 752
Query: 615 TERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDV-DSDGNV 673
+ R+ +V++GY+ YGARPLRR I +ED +AE++L ++ G+ V + V D+ N
Sbjct: 753 DDAARQWLVDKGYDSKYGARPLRRTIQNEVEDVLAERILMGKVHAGNKVKITVKDNKLNF 812
Query: 674 TVLNG 678
T+ G
Sbjct: 813 TLKRG 817
>gi|206895288|ref|YP_002247181.1| negative regulator of genetic competence ClpC/mecB
[Coprothermobacter proteolyticus DSM 5265]
gi|206737905|gb|ACI16983.1| negative regulator of genetic competence ClpC/mecB
[Coprothermobacter proteolyticus DSM 5265]
Length = 826
Score = 761 bits (1966), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/680 (56%), Positives = 513/680 (75%), Gaps = 21/680 (3%)
Query: 4 ESTEAVGAGVGGGSSGNKMPT--LEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRR 61
ES AG G + T LE++G +LT+LA +GKLDP+VGR +I+RV++IL RR
Sbjct: 165 ESRTRPSAGASPYQRGTQTATTELEKFGRDLTELARQGKLDPIVGRDSEIQRVLEILSRR 224
Query: 62 TKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEE 121
TKNNP LIG+ GVGKTAI EG+AQRIASGDVPD ++GK+VI LD+G LVAGTKYRGEFEE
Sbjct: 225 TKNNPILIGDAGVGKTAIVEGIAQRIASGDVPDALKGKRVIQLDIGSLVAGTKYRGEFEE 284
Query: 122 RLKKLMEE-IKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
R++K+++E IKQ D+IILFIDE+HT+IGAG AEGA+DA+N+LKP+LARG+L IGATT+D
Sbjct: 285 RMQKILDEVIKQKDKIILFIDEIHTIIGAGGAEGAVDASNMLKPALARGDLHVIGATTID 344
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRK+IEKDPA ERRFQPV VPEPS+++TI ILK L+++ E HHK++ TD A+ +A LS
Sbjct: 345 EYRKYIEKDPAFERRFQPVYVPEPSLEDTIAILKVLKDKLEAHHKVKITDNAIKAAVYLS 404
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
+YISDR LPDKAIDL+DEA ++VRLR + +P+E +EL++++ ++ K+ AV +FEK
Sbjct: 405 DRYISDRHLPDKAIDLLDEACAKVRLRASSVPKELKELDQKIDELQKQLRSAVDANEFEK 464
Query: 301 AGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVS 360
A +LRD +I+ L ++ +E K A VT+ ++ +VSAWTGIPV ++
Sbjct: 465 AAQLRD-------EIAKLKEEREEFEKKVRHASSNDLTVTDQEVAEVVSAWTGIPVTQLE 517
Query: 361 TDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 420
E ++L K+EE LH+RV+GQDEA+ A+++AIRRAR GLK+P RPI SFIF GPTGVGK+
Sbjct: 518 ESEKEKLAKLEEILHRRVVGQDEAISAVAQAIRRARTGLKDPKRPIGSFIFLGPTGVGKT 577
Query: 421 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 480
ELAKALA FG E A++R DMSE+ME+HTVS+LIGSPPGYVGY EGGQLTEAVRRRPY+
Sbjct: 578 ELAKALAEVLFGDESALVRFDMSEYMEKHTVSRLIGSPPGYVGYEEGGQLTEAVRRRPYS 637
Query: 481 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI 540
V+LFDEIEKAHPD+ N++LQ+L+DGRLTD+KGR VDFKNT++IMTSN+GS ++ +
Sbjct: 638 VILFDEIEKAHPDIHNLLLQVLDDGRLTDAKGRIVDFKNTIIIMTSNLGSHILMNAAQE- 696
Query: 541 GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 600
G + EK+ V + LK YFRPEFLNR+D+++ F+ LT E+KEIA + L
Sbjct: 697 GRPFEEAEKE---------VMDLLKSYFRPEFLNRVDDIVFFKPLTMDEIKEIAKLQLSY 747
Query: 601 VFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEG 660
V RL + I ++ T+ E + + G++P GARPLRRAI + +E+ +AEKM+ E+ G
Sbjct: 748 VAQRLSQQQIYVEFTDAAIENLAKVGFDPELGARPLRRAIQKEIENRIAEKMVLGEVAPG 807
Query: 661 DSVIVDVDSDGNVTVLNGSS 680
D + VD +G+ TV SS
Sbjct: 808 DHIKVDF-KEGSFTVQKISS 826
>gi|415712066|ref|ZP_11464562.1| ATPase AAA-2 domain protein [Gardnerella vaginalis 55152]
gi|415715746|ref|ZP_11466169.1| ATPase AAA-2 domain protein [Gardnerella vaginalis 1400E]
gi|388057293|gb|EIK80125.1| ATPase AAA-2 domain protein [Gardnerella vaginalis 55152]
gi|388058193|gb|EIK80991.1| ATPase AAA-2 domain protein [Gardnerella vaginalis 1400E]
Length = 829
Score = 761 bits (1966), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/647 (57%), Positives = 508/647 (78%), Gaps = 8/647 (1%)
Query: 25 LEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLA 84
L+++G NLT AE+GKLDPV+GR +IERV+ +L RRTKNNP LIGEPGVGKTA+ EGLA
Sbjct: 175 LDQFGRNLTTEAEQGKLDPVIGRSKEIERVMVVLSRRTKNNPVLIGEPGVGKTAVVEGLA 234
Query: 85 QRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVH 144
Q+I +GDVP+T++GK+V +LD+G +VAG++YRG+FEERLKK+++EIK +I+LFIDE+H
Sbjct: 235 QKIVAGDVPETLKGKQVYSLDLGSMVAGSRYRGDFEERLKKVLKEIKTRGDIVLFIDEIH 294
Query: 145 TLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEP 204
T++GAG+A+GA+ A+++LKP LARGELQ IGATT DEYRK+IEKD ALERRFQP++V EP
Sbjct: 295 TIVGAGSADGALGASDMLKPMLARGELQTIGATTTDEYRKYIEKDAALERRFQPIQVQEP 354
Query: 205 SVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRV 264
S+ ETI+ILKGLR RYE HH + TD AL SAA++S +YI DR LPDKAIDLIDEAG+R+
Sbjct: 355 SIAETIEILKGLRARYENHHHVTITDAALQSAAEMSARYIQDRNLPDKAIDLIDEAGARL 414
Query: 265 RLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKE 324
R++ P E +EL+ ++ +++++K+EA++ QDFEKA +LRD + L+ + K KE
Sbjct: 415 RIKRLTEPPELKELDSKISKLSEKKDEAIKNQDFEKAADLRDEQEKLEEE-----RKNKE 469
Query: 325 MSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEA 384
+ E E+ +V VV E I +VS TGIPV K++ ES +LL ME LHKR+IGQDEA
Sbjct: 470 QAWREGES-NVNMVVDEDVIASVVSNTTGIPVVKLTQAESKKLLGMEAELHKRIIGQDEA 528
Query: 385 VKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSE 444
V A+SR+IRRARVGLK+P RP SFIF+GPTGVGK+ELAK LA + F ++A+IR+DMSE
Sbjct: 529 VSALSRSIRRARVGLKDPKRPSGSFIFAGPTGVGKTELAKTLAQFLFDDDDALIRVDMSE 588
Query: 445 FMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILED 504
F E++ S+L G+PPGYVGY EGG+LTE VRR+P++VVLFDEIEKAHPD+FN +LQ+L+D
Sbjct: 589 FAEKYAASRLFGAPPGYVGYEEGGELTEKVRRKPFSVVLFDEIEKAHPDIFNTLLQVLDD 648
Query: 505 GRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEEL 564
G LTD +GR VDFKNT++I+T+N+G+ I K GF L + D+SY R+K V EL
Sbjct: 649 GHLTDGQGRKVDFKNTIIILTTNLGTRDIAKSA-NTGFSLG-NNADASYQRMKDQVNSEL 706
Query: 565 KQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVE 624
K+ FRPEFLNRLD+ IVFRQLT+ EV++I D+ +K + DRL + + L++T+ + + +
Sbjct: 707 KRQFRPEFLNRLDDTIVFRQLTEPEVRQIVDLDVKRLNDRLFERHMTLELTDAAKNLLAQ 766
Query: 625 EGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDG 671
+G++P GARPLRR I R +ED+++EK+L ++ +G+ V VD + +G
Sbjct: 767 KGFDPLLGARPLRRVIQRDIEDAISEKILLGDLTDGERVEVDAEGEG 813
>gi|308235068|ref|ZP_07665805.1| negative regulator of genetic competence ClpC/MecB [Gardnerella
vaginalis ATCC 14018 = JCM 11026]
gi|311114547|ref|YP_003985768.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Gardnerella
vaginalis ATCC 14019]
gi|415702808|ref|ZP_11458954.1| ATPase AAA-2 domain protein [Gardnerella vaginalis 284V]
gi|415705433|ref|ZP_11460704.1| ATPase AAA-2 domain protein [Gardnerella vaginalis 75712]
gi|415707392|ref|ZP_11462161.1| ATPase AAA-2 domain protein [Gardnerella vaginalis 0288E]
gi|417556993|ref|ZP_12208048.1| negative regulator of genetic competence ClpC/MecB [Gardnerella
vaginalis 315-A]
gi|310946041|gb|ADP38745.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Gardnerella
vaginalis ATCC 14019]
gi|333601924|gb|EGL13358.1| negative regulator of genetic competence ClpC/MecB [Gardnerella
vaginalis 315-A]
gi|388052155|gb|EIK75179.1| ATPase AAA-2 domain protein [Gardnerella vaginalis 75712]
gi|388053354|gb|EIK76345.1| ATPase AAA-2 domain protein [Gardnerella vaginalis 284V]
gi|388053781|gb|EIK76745.1| ATPase AAA-2 domain protein [Gardnerella vaginalis 0288E]
Length = 829
Score = 761 bits (1965), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/647 (57%), Positives = 508/647 (78%), Gaps = 8/647 (1%)
Query: 25 LEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLA 84
L+++G NLT AE+GKLDPV+GR +IERV+ +L RRTKNNP LIGEPGVGKTA+ EGLA
Sbjct: 175 LDQFGRNLTTEAEQGKLDPVIGRSKEIERVMVVLSRRTKNNPVLIGEPGVGKTAVVEGLA 234
Query: 85 QRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVH 144
Q+I +GDVP+T++GK+V +LD+G +VAG++YRG+FEERLKK+++EIK +I+LFIDE+H
Sbjct: 235 QKIVAGDVPETLKGKQVYSLDLGSMVAGSRYRGDFEERLKKVLKEIKTRGDIVLFIDEIH 294
Query: 145 TLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEP 204
T++GAG+A+GA+ A+++LKP LARGELQ IGATT DEYRK+IEKD ALERRFQP++V EP
Sbjct: 295 TIVGAGSADGALGASDMLKPMLARGELQTIGATTTDEYRKYIEKDAALERRFQPIQVQEP 354
Query: 205 SVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRV 264
S+ ETI+ILKGLR RYE HH + TD AL SAA++S +YI DR LPDKAIDLIDEAG+R+
Sbjct: 355 SIAETIEILKGLRARYENHHHVTITDAALQSAAEMSARYIQDRNLPDKAIDLIDEAGARL 414
Query: 265 RLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKE 324
R++ P E +EL+ ++ +++++K+EA++ QDFEKA +LRD + L+ + K KE
Sbjct: 415 RIKRLTEPPELKELDSKISKLSEKKDEAIKNQDFEKAADLRDEQEKLEEE-----RKNKE 469
Query: 325 MSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEA 384
+ E E+ +V VV E I +VS TGIPV K++ ES +LL ME LHKR+IGQDEA
Sbjct: 470 QAWREGES-NVNMVVDEDVIASVVSNTTGIPVVKLTQAESKKLLGMEAELHKRIIGQDEA 528
Query: 385 VKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSE 444
V A+SR+IRRARVGLK+P RP SFIF+GPTGVGK+ELAK LA + F ++A+IR+DMSE
Sbjct: 529 VSALSRSIRRARVGLKDPKRPSGSFIFAGPTGVGKTELAKTLAQFLFDDDDALIRVDMSE 588
Query: 445 FMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILED 504
F E++ S+L G+PPGYVGY EGG+LTE VRR+P++VVLFDEIEKAHPD+FN +LQ+L+D
Sbjct: 589 FAEKYAASRLFGAPPGYVGYEEGGELTEKVRRKPFSVVLFDEIEKAHPDIFNTLLQVLDD 648
Query: 505 GRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEEL 564
G LTD +GR VDFKNT++I+T+N+G+ I K GF L + D+SY R+K V EL
Sbjct: 649 GHLTDGQGRKVDFKNTIIILTTNLGTRDIAKSA-NTGFSLG-NNADASYQRMKDQVNSEL 706
Query: 565 KQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVE 624
K+ FRPEFLNRLD+ IVFRQLT+ EV++I D+ +K + DRL + + L++T+ + + +
Sbjct: 707 KRQFRPEFLNRLDDTIVFRQLTEPEVRQIVDLDVKRLNDRLFERHMTLELTDAAKNLLAQ 766
Query: 625 EGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDG 671
+G++P GARPLRR I R +ED+++EK+L ++ +G+ V VD + +G
Sbjct: 767 KGFDPLLGARPLRRVIQRDIEDAISEKILLGDLTDGERVEVDAEGEG 813
>gi|68535364|ref|YP_250069.1| ATP-dependent Clp protease [Corynebacterium jeikeium K411]
gi|68262963|emb|CAI36451.1| ATP-dependent Clp protease [Corynebacterium jeikeium K411]
Length = 885
Score = 761 bits (1964), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/697 (55%), Positives = 527/697 (75%), Gaps = 19/697 (2%)
Query: 2 VGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRR 61
VG S E GA G N + L+++G NLT+ A++GKLDPVVGR+ +IERV+Q+L RR
Sbjct: 162 VGSSPE--GAPSRPGQKSNSL-VLDQFGRNLTQAAKDGKLDPVVGRENEIERVMQVLSRR 218
Query: 62 TKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEE 121
TKNNP LIGEPGVGKTA+ EGLA I +G VP+T++ K++ +LD+G LVAG++YRG+FEE
Sbjct: 219 TKNNPVLIGEPGVGKTAVVEGLALDIVNGKVPETLKDKQLYSLDLGSLVAGSRYRGDFEE 278
Query: 122 RLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDE 181
RLKK+++EI Q +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDE
Sbjct: 279 RLKKVLKEINQRGDIILFIDEIHTLVGAGAAEGAIDAASILKPKLARGELQTIGATTLDE 338
Query: 182 YRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSY 241
YRKHIEKD ALERRFQPV+VPEPSV+ T++ILKGLR+RYE HH++ TD AL +AAQL+
Sbjct: 339 YRKHIEKDAALERRFQPVQVPEPSVELTVEILKGLRDRYEAHHRVSITDGALKAAAQLAD 398
Query: 242 QYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKA 301
+YI+DRFLPDKA+DLIDEAG+R+R++ P+ ++++ ++ ++ ++K A+ QDFEKA
Sbjct: 399 RYINDRFLPDKAVDLIDEAGARMRIKRMTAPKAIQDIDDKIAEVRRKKEAAIDDQDFEKA 458
Query: 302 GELRDREMDLKAQISALVDKGKEMSKAE--TEAGDVGPV--VTEVDIQHIVSAWTGIPVE 357
LRD E L G+E ++ E AG++ V V E I ++ WTGIPV
Sbjct: 459 AALRDDERKL----------GEERAEKEKAWRAGELDEVAEVGEEQIAEVMGTWTGIPVF 508
Query: 358 KVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGV 417
K++ +ES RLL ME+ LHKR+IGQD+AVKA+SRAIRR R GLK+P RP SFIF+GP+GV
Sbjct: 509 KLTEEESTRLLHMEDELHKRIIGQDDAVKAVSRAIRRTRAGLKDPKRPSGSFIFAGPSGV 568
Query: 418 GKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRR 477
GK+EL+KALA + FG ++A+I++DM EF ++ T S+L G+PPGYVGY EGGQLTE VRR+
Sbjct: 569 GKTELSKALAEFLFGDDDALIQIDMGEFHDKFTASRLFGAPPGYVGYDEGGQLTEKVRRK 628
Query: 478 PYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGG 537
P++VVLFDEIEKAH +++N +LQ+LEDGRLTD +GR VDFKNT+LI TSN+G+ I K
Sbjct: 629 PFSVVLFDEIEKAHTEIYNTLLQVLEDGRLTDGQGRMVDFKNTVLIFTSNLGTRDISK-A 687
Query: 538 RRIGFDLDYD-EKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADI 596
+GF + ++D+ Y R+K V +ELK++FRPEFLNR+D+++VF QLT+ ++ ++ D+
Sbjct: 688 VGMGFSASGEADEDTQYERMKQKVDDELKKHFRPEFLNRIDDIVVFHQLTREQIVQMVDL 747
Query: 597 MLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLARE 656
+L V L+ KD+ L++TE+ + + + G++P GARPLRR I R +ED ++EK+L E
Sbjct: 748 LLGRVRTALEAKDMGLELTEQAKSLLAKRGFDPVLGARPLRRTIQREIEDHLSEKILFGE 807
Query: 657 IKEGDSVIVDVDSDGNVTVLNGSSGAPESLADPLPVV 693
I G+ V VDV++ + + + ++ PLP V
Sbjct: 808 IGAGEIVTVDVENWDGESKGDDAKFVFDTKPKPLPEV 844
>gi|283783197|ref|YP_003373951.1| negative regulator of genetic competence ClpC/MecB [Gardnerella
vaginalis 409-05]
gi|283441539|gb|ADB14005.1| negative regulator of genetic competence ClpC/MecB [Gardnerella
vaginalis 409-05]
Length = 862
Score = 761 bits (1964), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 370/647 (57%), Positives = 508/647 (78%), Gaps = 8/647 (1%)
Query: 25 LEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLA 84
L+++G NLT A+EGKLDPV+GR +IERV+ +L RRTKNNP LIGEPGVGKTA+ EGLA
Sbjct: 174 LDQFGRNLTFEAQEGKLDPVIGRSEEIERVMVVLSRRTKNNPVLIGEPGVGKTAVVEGLA 233
Query: 85 QRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVH 144
Q+I GDVP+T++ K+V +LD+G ++AG++YRG+FEERLKK+++EIK +I+LFIDE+H
Sbjct: 234 QKIVEGDVPETLKNKQVYSLDLGSMIAGSRYRGDFEERLKKVLKEIKTRGDIVLFIDEIH 293
Query: 145 TLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEP 204
T++GAG+A+GA+ A+++LKP LARGELQ IGATT DEYRK+IEKD ALERRFQP++VPEP
Sbjct: 294 TIVGAGSADGALGASDMLKPMLARGELQTIGATTTDEYRKYIEKDAALERRFQPIQVPEP 353
Query: 205 SVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRV 264
++ ETI+ILKGLR RYE HH + TD AL S+A+LS +YI DR LPDKAIDLIDEAG+R+
Sbjct: 354 TIAETIEILKGLRSRYENHHHVTITDGALQSSAELSDRYIQDRHLPDKAIDLIDEAGARL 413
Query: 265 RLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKE 324
R++ P E +EL ++ +I+++K+EA++ QDFE+A LRD + L+ + + KE
Sbjct: 414 RIKRLTQPPELKELNHKIAKISEKKDEAIKQQDFEEAANLRDDQEKLENEAAE-----KE 468
Query: 325 MSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEA 384
+ E E+ +V VV E I +VS+ TGIPV K++ ES +LL+ME LHKR++GQDEA
Sbjct: 469 KAWREGES-NVKMVVDEDMIASVVSSTTGIPVVKLTQAESQKLLQMESELHKRIVGQDEA 527
Query: 385 VKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSE 444
V A++R+IRRARVGLK+P RP SFIF+GPTGVGK+ELAKALA + F + A+IR+DMSE
Sbjct: 528 VSALARSIRRARVGLKDPKRPSGSFIFAGPTGVGKTELAKALANFLFDDDNALIRVDMSE 587
Query: 445 FMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILED 504
F E++ S+L G+PPGYVGY EGG+LTE VRR+P++VVLFDEIEKAHPD+FN +LQ+L+D
Sbjct: 588 FAEKYAASRLFGAPPGYVGYEEGGELTEKVRRKPFSVVLFDEIEKAHPDIFNTLLQVLDD 647
Query: 505 GRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEEL 564
G LTD +GR VDFKNT++I+T+N+G+ I K GF L + DS+Y R+K V EL
Sbjct: 648 GHLTDGQGRKVDFKNTIIILTTNLGTRDIAKAA-NTGFTLG-NNADSTYQRMKDQVNSEL 705
Query: 565 KQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVE 624
K++FRPEFLNRLD+ IVFRQLT+ EV++I D+ +K + DRL + + L++T+ + + +
Sbjct: 706 KRHFRPEFLNRLDDTIVFRQLTEPEVRQIVDMDVKLLNDRLFDRHMSLEITDAAKNLLAQ 765
Query: 625 EGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDG 671
+G++P GARPLRR I R +ED+++EK+L E+ +G+ + VD + +G
Sbjct: 766 KGFDPLLGARPLRRVIQRDIEDTISEKILLGELSDGEHIKVDAEGEG 812
>gi|384456448|ref|YP_005669046.1| negative regulator of genetic competence ClpC/mecB [Candidatus
Arthromitus sp. SFB-mouse-Yit]
gi|417961014|ref|ZP_12603506.1| ClpC [Candidatus Arthromitus sp. SFB-2]
gi|417963873|ref|ZP_12605726.1| ClpC [Candidatus Arthromitus sp. SFB-3]
gi|417965450|ref|ZP_12606975.1| ClpC [Candidatus Arthromitus sp. SFB-4]
gi|417966566|ref|ZP_12607903.1| ClpC [Candidatus Arthromitus sp. SFB-5]
gi|417968433|ref|ZP_12609454.1| ClpC [Candidatus Arthromitus sp. SFB-co]
gi|418015512|ref|ZP_12655077.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Candidatus
Arthromitus sp. SFB-mouse-NYU]
gi|418373339|ref|ZP_12965428.1| ClpC [Candidatus Arthromitus sp. SFB-mouse-SU]
gi|345505847|gb|EGX28141.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Candidatus
Arthromitus sp. SFB-mouse-NYU]
gi|346984794|dbj|BAK80470.1| negative regulator of genetic competence ClpC/mecB [Candidatus
Arthromitus sp. SFB-mouse-Yit]
gi|380331576|gb|EIA22599.1| ClpC [Candidatus Arthromitus sp. SFB-3]
gi|380334540|gb|EIA24925.1| ClpC [Candidatus Arthromitus sp. SFB-2]
gi|380337619|gb|EIA26648.1| ClpC [Candidatus Arthromitus sp. SFB-4]
gi|380339701|gb|EIA28396.1| ClpC [Candidatus Arthromitus sp. SFB-co]
gi|380340944|gb|EIA29477.1| ClpC [Candidatus Arthromitus sp. SFB-5]
gi|380341175|gb|EIA29668.1| ClpC [Candidatus Arthromitus sp. SFB-mouse-SU]
Length = 812
Score = 761 bits (1964), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/655 (57%), Positives = 505/655 (77%), Gaps = 7/655 (1%)
Query: 23 PTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEG 82
P L+++G +LTKLA EGKLDPV+GR + +RV++IL RR KNNPCLIG+PGVGKTAI EG
Sbjct: 164 PVLDQHGRDLTKLANEGKLDPVIGRDTETQRVLEILCRRIKNNPCLIGDPGVGKTAIIEG 223
Query: 83 LAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDE 142
LAQ+I G++P+ ++ K+VITLD+ L+AGTKYRGEFEERLKK+MEEIK+S IILFIDE
Sbjct: 224 LAQKIIEGNIPEILKNKRVITLDLSSLIAGTKYRGEFEERLKKIMEEIKRSRNIILFIDE 283
Query: 143 VHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVP 202
+HT+IGAG AEGAIDA+NILKP+LARGE+QCIGATT+DEYRK+IEKD ALERRFQP+ V
Sbjct: 284 IHTIIGAGGAEGAIDASNILKPALARGEIQCIGATTIDEYRKYIEKDTALERRFQPIFVG 343
Query: 203 EPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGS 262
EP+ +ETI IL G+R++YE HHK++ TDEA+ A LS ++I DR+LPDKAIDLIDEA +
Sbjct: 344 EPNENETIDILIGIRDKYETHHKVKITDEAIKFAVSLSVRFIPDRYLPDKAIDLIDEASA 403
Query: 263 RVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKG 322
++R+R+ +P E +E+E+E+ ++ KEK EA+ +DFEKA LRD+E LK ++ +
Sbjct: 404 KIRVRNLTVPIEVKEIEEEIAKVGKEKQEAITLEDFEKAASLRDKEQKLKERL----ENS 459
Query: 323 KEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQD 382
KE K + E D ++TE ++ +V++WT IPVEK++ ES++LLK+++ L RVI Q+
Sbjct: 460 KE--KWKVEKYDKEFILTEQELASVVASWTKIPVEKLTQTESEKLLKLDDILRSRVIDQN 517
Query: 383 EAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDM 442
EAV +++RA++R RVGLK+P RPI SFIF GPTGVGK+EL KALA FGSE+ +IR DM
Sbjct: 518 EAVISVARAVKRGRVGLKDPKRPIGSFIFLGPTGVGKTELCKALADAVFGSEDNIIRFDM 577
Query: 443 SEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQIL 502
SEFME+HTVSK+IGSPPGYVG+ EGGQLTE VRR PY+++LFDEIEKAHPD+FN+MLQIL
Sbjct: 578 SEFMEKHTVSKIIGSPPGYVGFQEGGQLTEKVRRSPYSIILFDEIEKAHPDIFNIMLQIL 637
Query: 503 EDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTE 562
EDG LTDS G+ + FKNT++I+TSN+G+++I K +GF + + YN+IK V
Sbjct: 638 EDGHLTDSNGKKISFKNTIIILTSNIGANIINKDS-SLGFVNHKNGDEEVYNKIKDNVLS 696
Query: 563 ELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERV 622
ELK+ FRPEFLNRLD++IVF+ L K + +I D ML + R+ ++I + + + +
Sbjct: 697 ELKKSFRPEFLNRLDDIIVFKPLDKKSLVKILDKMLDDFKSRVLNQNIIINFNDDVKNYI 756
Query: 623 VEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTVLN 677
+E + YGARPLRR+I + +EDS+++++L IK DSV V + D + N
Sbjct: 757 LENSSSEKYGARPLRRSITKYIEDSLSDQILLGNIKANDSVEVILKDDKICYIKN 811
>gi|409356843|ref|ZP_11235230.1| ATPases with chaperone activity, ATP-binding subunit [Dietzia
alimentaria 72]
Length = 884
Score = 760 bits (1963), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 384/669 (57%), Positives = 512/669 (76%), Gaps = 13/669 (1%)
Query: 25 LEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLA 84
L+++G NLT+ A EGKLDPVVGR ++ER++Q+L RRTKNNP LIGEPGVGKTA+ EGLA
Sbjct: 173 LDQFGRNLTQAAMEGKLDPVVGRAKEVERIMQVLSRRTKNNPVLIGEPGVGKTAVVEGLA 232
Query: 85 QRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVH 144
Q I + +VP+T++ K++ +LD+G LVAG++YRG+FEERLKK+++EI Q +IILFIDE+H
Sbjct: 233 QAIVNNEVPETLKDKQLYSLDLGSLVAGSRYRGDFEERLKKVLKEINQRGDIILFIDEIH 292
Query: 145 TLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEP 204
TL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEYRKHIEKD ALERRFQPV+VPEP
Sbjct: 293 TLVGAGAAEGAIDAASILKPKLARGELQTIGATTLDEYRKHIEKDAALERRFQPVQVPEP 352
Query: 205 SVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRV 264
V+ +I+ILKGLR+RYE HH++ TD AL +AAQL+ +YI+DRFLPDKAIDLIDEAG+R+
Sbjct: 353 GVELSIEILKGLRDRYEAHHRVTITDAALAAAAQLADRYINDRFLPDKAIDLIDEAGARM 412
Query: 265 RLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKE 324
R++ P + RE ++++ + +EK A+ QDFEKA LRD E L A+ S ++ K+
Sbjct: 413 RIKRMTAPPDLREFDEKIAEARREKESAIDAQDFEKAAGLRDTEKKLIAERS---EREKQ 469
Query: 325 MSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEA 384
+ DV VV E I ++ WTGIPV K++ +E+ RLL+MEE L KR+IGQDEA
Sbjct: 470 WRAGDM---DVAAVVDEEQIAEVLGNWTGIPVFKLTEEETTRLLRMEEELSKRIIGQDEA 526
Query: 385 VKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSE 444
+KA+SRAIRR R GLK+P RP SFIF+GP+GVGK+EL+KALA + FG ++A+I++DM E
Sbjct: 527 IKAVSRAIRRTRAGLKDPKRPSGSFIFAGPSGVGKTELSKALANFLFGEDDALIQIDMGE 586
Query: 445 FMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILED 504
F +R T S+L G+PPGYVGY EGGQLTE VRR+P++VVLFDEIEKAH +++N +LQ+LED
Sbjct: 587 FHDRFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHTEIYNTLLQVLED 646
Query: 505 GRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEEL 564
GRLTD +GR VDFKNT+LI TSN+G+ I K +GF D + +Y R+K V +EL
Sbjct: 647 GRLTDGQGRMVDFKNTVLIFTSNLGTRDISK-AVGMGFQ-SSDNTEDAYERMKQKVNDEL 704
Query: 565 KQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVE 624
K++FRPEFLNR+DE++VF QLT+ ++ ++ D+M+ V LK KD+ ++VT+R ++ + +
Sbjct: 705 KKHFRPEFLNRIDEIVVFHQLTQEQIVQMVDLMVSRVGVALKAKDMTIEVTDRAKQLLAK 764
Query: 625 EGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDV-----DSDGNVTVLNGS 679
G++P GARPLRR I R +ED+++EK+L E+ G+ V VDV +SD
Sbjct: 765 RGFDPVLGARPLRRTIQREIEDTLSEKILFGEVAAGELVSVDVEGWDGESDKTENAKFTF 824
Query: 680 SGAPESLAD 688
SGAP D
Sbjct: 825 SGAPRPDGD 833
>gi|342733080|ref|YP_004771919.1| negative regulator of genetic competence clpC/mecB [Candidatus
Arthromitus sp. SFB-mouse-Japan]
gi|342330535|dbj|BAK57177.1| negative regulator of genetic competence clpC/mecB [Candidatus
Arthromitus sp. SFB-mouse-Japan]
Length = 812
Score = 760 bits (1963), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/655 (57%), Positives = 505/655 (77%), Gaps = 7/655 (1%)
Query: 23 PTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEG 82
P L+++G +LTKLA EGKLDPV+GR + +RV++IL RR KNNPCLIG+PGVGKTAI EG
Sbjct: 164 PVLDQHGRDLTKLANEGKLDPVIGRDTETQRVLEILCRRIKNNPCLIGDPGVGKTAIIEG 223
Query: 83 LAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDE 142
LAQ+I G++P+ ++ K+VITLD+ L+AGTKYRGEFEERLKK+MEEIK+S IILFIDE
Sbjct: 224 LAQKIIEGNIPEILKNKRVITLDLSSLIAGTKYRGEFEERLKKIMEEIKRSRNIILFIDE 283
Query: 143 VHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVP 202
+HT+IGAG AEGAIDA+NILKP+LARGE+QCIGATT+DEYRK+IEKD ALERRFQP+ V
Sbjct: 284 IHTIIGAGGAEGAIDASNILKPALARGEIQCIGATTIDEYRKYIEKDTALERRFQPIFVG 343
Query: 203 EPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGS 262
EP+ +ETI IL G+R++YE HHK++ TDEA+ A LS ++I DR+LPDKAIDLIDEA +
Sbjct: 344 EPNENETIDILIGIRDKYETHHKVKITDEAIKFAVSLSVRFIPDRYLPDKAIDLIDEASA 403
Query: 263 RVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKG 322
++R+R+ +P E +E+E+E+ ++ KEK EA+ +DFEKA LRD+E LK ++ +
Sbjct: 404 KIRVRNLTVPIEVKEIEEEIAKVGKEKQEAITLEDFEKAASLRDKEQKLKERL----ENS 459
Query: 323 KEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQD 382
KE K + E D ++TE ++ +V++WT IPVEK++ ES++LLK+++ L RVI Q+
Sbjct: 460 KE--KWKVEKYDKEFILTEQELASVVASWTKIPVEKLTHTESEKLLKLDDILRSRVIDQN 517
Query: 383 EAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDM 442
EAV +++RA++R RVGLK+P RPI SFIF GPTGVGK+EL KALA FGSE+ +IR DM
Sbjct: 518 EAVISVARAVKRGRVGLKDPKRPIGSFIFLGPTGVGKTELCKALADAVFGSEDNIIRFDM 577
Query: 443 SEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQIL 502
SEFME+HTVSK+IGSPPGYVG+ EGGQLTE VRR PY+++LFDEIEKAHPD+FN+MLQIL
Sbjct: 578 SEFMEKHTVSKIIGSPPGYVGFQEGGQLTEKVRRSPYSIILFDEIEKAHPDIFNIMLQIL 637
Query: 503 EDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTE 562
EDG LTDS G+ + FKNT++I+TSN+G+++I K +GF + + YN+IK V
Sbjct: 638 EDGHLTDSNGKKISFKNTIIILTSNIGANIINKDS-SLGFVNHKNGDEEVYNKIKDNVLS 696
Query: 563 ELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERV 622
ELK+ FRPEFLNRLD++IVF+ L K + +I D ML + R+ ++I + + + +
Sbjct: 697 ELKKSFRPEFLNRLDDIIVFKPLDKKSLVKILDKMLDDFKSRVLNQNIIINFNDDVKNYI 756
Query: 623 VEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTVLN 677
+E + YGARPLRR+I + +EDS+++++L IK DSV V + D + N
Sbjct: 757 LENSSSEKYGARPLRRSITKYIEDSLSDQILLGNIKANDSVEVILKDDKICYIKN 811
>gi|298253965|ref|ZP_06977552.1| ATP-binding subunits of Clp [Gardnerella vaginalis 5-1]
gi|297532108|gb|EFH71083.1| ATP-binding subunits of Clp [Gardnerella vaginalis 5-1]
Length = 852
Score = 760 bits (1962), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 370/647 (57%), Positives = 508/647 (78%), Gaps = 8/647 (1%)
Query: 25 LEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLA 84
L+++G NLT A+EGKLDPV+GR +IERV+ +L RRTKNNP LIGEPGVGKTA+ EGLA
Sbjct: 163 LDQFGRNLTFEAQEGKLDPVIGRSEEIERVMVVLSRRTKNNPVLIGEPGVGKTAVVEGLA 222
Query: 85 QRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVH 144
Q+I GDVP+T++ K+V +LD+G ++AG++YRG+FEERLKK+++EIK +I+LFIDE+H
Sbjct: 223 QKIVEGDVPETLKNKQVYSLDLGSMIAGSRYRGDFEERLKKVLKEIKTRGDIVLFIDEIH 282
Query: 145 TLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEP 204
T++GAG+A+GA+ A+++LKP LARGELQ IGATT DEYRK+IEKD ALERRFQP++VPEP
Sbjct: 283 TIVGAGSADGALGASDMLKPMLARGELQTIGATTTDEYRKYIEKDAALERRFQPIQVPEP 342
Query: 205 SVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRV 264
++ ETI+ILKGLR RYE HH + TD AL S+A+LS +YI DR LPDKAIDLIDEAG+R+
Sbjct: 343 TIAETIEILKGLRSRYENHHHVTITDGALQSSAELSDRYIQDRHLPDKAIDLIDEAGARL 402
Query: 265 RLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKE 324
R++ P E +EL ++ +I+++K+EA++ QDFE+A LRD + L+ + + KE
Sbjct: 403 RIKRLTQPPELKELNHKIAKISEKKDEAIKQQDFEEAANLRDDQEKLENEAAE-----KE 457
Query: 325 MSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEA 384
+ E E+ +V VV E I +VS+ TGIPV K++ ES +LL+ME LHKR++GQDEA
Sbjct: 458 KAWREGES-NVKMVVDEDMIASVVSSTTGIPVVKLTQAESQKLLQMESELHKRIVGQDEA 516
Query: 385 VKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSE 444
V A++R+IRRARVGLK+P RP SFIF+GPTGVGK+ELAKALA + F + A+IR+DMSE
Sbjct: 517 VSALARSIRRARVGLKDPKRPSGSFIFAGPTGVGKTELAKALANFLFDDDNALIRVDMSE 576
Query: 445 FMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILED 504
F E++ S+L G+PPGYVGY EGG+LTE VRR+P++VVLFDEIEKAHPD+FN +LQ+L+D
Sbjct: 577 FAEKYAASRLFGAPPGYVGYEEGGELTEKVRRKPFSVVLFDEIEKAHPDIFNTLLQVLDD 636
Query: 505 GRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEEL 564
G LTD +GR VDFKNT++I+T+N+G+ I K GF L + DS+Y R+K V EL
Sbjct: 637 GHLTDGQGRKVDFKNTIIILTTNLGTRDIAKAA-NTGFTLG-NNADSTYQRMKDQVNSEL 694
Query: 565 KQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVE 624
K++FRPEFLNRLD+ IVFRQLT+ EV++I D+ +K + DRL + + L++T+ + + +
Sbjct: 695 KRHFRPEFLNRLDDTIVFRQLTEPEVRQIVDMDVKLLNDRLFDRHMSLEITDAAKNLLAQ 754
Query: 625 EGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDG 671
+G++P GARPLRR I R +ED+++EK+L E+ +G+ + VD + +G
Sbjct: 755 KGFDPLLGARPLRRVIQRDIEDTISEKILLGELSDGEHIKVDAEGEG 801
>gi|269217199|ref|ZP_06161053.1| negative regulator of genetic competence ClpC/MecB [Slackia exigua
ATCC 700122]
gi|269129336|gb|EEZ60421.1| negative regulator of genetic competence ClpC/MecB [Slackia exigua
ATCC 700122]
Length = 874
Score = 760 bits (1962), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/658 (57%), Positives = 506/658 (76%), Gaps = 10/658 (1%)
Query: 25 LEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLA 84
LEE+GT+LTK A G LDPV+GR +IERV+Q+L RR KNNP LIGEPGVGKTA+AEGLA
Sbjct: 186 LEEFGTDLTKKARRGTLDPVIGRSAEIERVLQVLSRRQKNNPLLIGEPGVGKTAVAEGLA 245
Query: 85 QRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVH 144
+ IA+G VPD I K+VITLD+ LVAG+KYRGEFE+RLKK+++E+ ++ ++ILFIDE+H
Sbjct: 246 ELIAAGQVPDIIRNKRVITLDVSALVAGSKYRGEFEDRLKKVVKEVIKAGDVILFIDEMH 305
Query: 145 TLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEP 204
T+IGAG+AEG+IDAA ILKP L+RGE+Q IGATT +EYRKH+EKD AL RRFQ + V EP
Sbjct: 306 TIIGAGSAEGSIDAAAILKPPLSRGEIQVIGATTTEEYRKHLEKDTALARRFQTITVGEP 365
Query: 205 SVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRV 264
S ++ ++IL+GLR+RYE HH +RYTDEA+ SA +S +YI DRFLPDKAID++DEAG+R
Sbjct: 366 SEEQAVRILEGLRDRYEAHHHVRYTDEAIQSAVSMSVRYIQDRFLPDKAIDVMDEAGARA 425
Query: 265 RLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKE 324
R+R+ LPEE +L+ ELR++ ++ +AV Q++EKA +LRD E L A+ + +
Sbjct: 426 RIRNRVLPEEVLKLDDELRRVRNDREDAVAKQEYEKAAKLRDEETVLTAK------RDEA 479
Query: 325 MSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEA 384
KAE EA + + E +I +VS +G+PV ++ DE+ +LL+ME LH+R+IGQ+EA
Sbjct: 480 QKKAEEEADAIVSEIGESEIAEVVSLASGVPVHDLTEDEAKKLLRMEGVLHERIIGQEEA 539
Query: 385 VKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSE 444
V A+S+AIRR+R GLK+P RP SFIF GP+GVGK+EL+KALA + F SEEA+I DMSE
Sbjct: 540 VTALSKAIRRSRSGLKDPRRPAGSFIFLGPSGVGKTELSKALAEFLFSSEEALISFDMSE 599
Query: 445 FMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILED 504
+ME+HTVS+LIGSPPGYVG+ EGGQLT+AVR+ PY+VVLFDEIEKAHPDVFN++LQILE+
Sbjct: 600 YMEKHTVSRLIGSPPGYVGFDEGGQLTKAVRQHPYSVVLFDEIEKAHPDVFNILLQILEE 659
Query: 505 GRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEEL 564
GRLTD++GRTVDF+N ++IMTSNVG+ I +GF D ++ S IKS V EL
Sbjct: 660 GRLTDAQGRTVDFRNAVIIMTSNVGARDIVASA-PLGFAPD-NQVGLSDKEIKSRVMSEL 717
Query: 565 KQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVE 624
K+ FRPEFLNRLDE+IVF+ LTK ++ I ++M+ ++ DRL +++ + +TE R+ + +
Sbjct: 718 KKLFRPEFLNRLDEIIVFKSLTKDQIARIVELMVADLRDRLIEQNMTINLTEAARDHIAK 777
Query: 625 EGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNGSSGA 682
EG + + GARPLRRAI RLLED ++E++L E D ++DVD DG V GA
Sbjct: 778 EGTDTAMGARPLRRAIQRLLEDPISEQIL--EGTWVDGSVIDVDFDGEKLVFTPGEGA 833
>gi|402829159|ref|ZP_10878040.1| Clp amino terminal domain protein [Slackia sp. CM382]
gi|402284913|gb|EJU33406.1| Clp amino terminal domain protein [Slackia sp. CM382]
Length = 865
Score = 760 bits (1962), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/658 (57%), Positives = 506/658 (76%), Gaps = 10/658 (1%)
Query: 25 LEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLA 84
LEE+GT+LTK A G LDPV+GR +IERV+Q+L RR KNNP LIGEPGVGKTA+AEGLA
Sbjct: 177 LEEFGTDLTKKARRGTLDPVIGRSAEIERVLQVLSRRQKNNPLLIGEPGVGKTAVAEGLA 236
Query: 85 QRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVH 144
+ IA+G VPD I K+VITLD+ LVAG+KYRGEFE+RLKK+++E+ ++ ++ILFIDE+H
Sbjct: 237 ELIAAGQVPDIIRDKRVITLDVSALVAGSKYRGEFEDRLKKVVKEVIKAGDVILFIDEMH 296
Query: 145 TLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEP 204
T+IGAG+AEG+IDAA ILKP L+RGE+Q IGATT +EYRKH+EKD AL RRFQ + V EP
Sbjct: 297 TIIGAGSAEGSIDAAAILKPPLSRGEIQVIGATTTEEYRKHLEKDTALARRFQTITVGEP 356
Query: 205 SVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRV 264
S ++ ++IL+GLR+RYE HH +RYTDEA+ SA +S +YI DRFLPDKAID++DEAG+R
Sbjct: 357 SEEQAVRILEGLRDRYEAHHHVRYTDEAIQSAVSMSVRYIQDRFLPDKAIDVMDEAGARA 416
Query: 265 RLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKE 324
R+R+ LPEE +L+ ELR++ ++ +AV Q++EKA +LRD E L A+ + +
Sbjct: 417 RIRNRVLPEEVLKLDDELRRVRNDREDAVAKQEYEKAAKLRDEETVLTAK------RDEA 470
Query: 325 MSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEA 384
KAE EA + + E +I +VS +G+PV ++ DE+ +LL+ME LH+R+IGQ+EA
Sbjct: 471 QKKAEEEADAIVSEIGESEIAEVVSLASGVPVHDLTEDEAKKLLRMEGVLHERIIGQEEA 530
Query: 385 VKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSE 444
V A+S+AIRR+R GLK+P RP SFIF GP+GVGK+EL+KALA + F SEEA+I DMSE
Sbjct: 531 VTALSKAIRRSRSGLKDPRRPAGSFIFLGPSGVGKTELSKALAEFLFSSEEALISFDMSE 590
Query: 445 FMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILED 504
+ME+HTVS+LIGSPPGYVG+ EGGQLT+AVR+ PY+VVLFDEIEKAHPDVFN++LQILE+
Sbjct: 591 YMEKHTVSRLIGSPPGYVGFDEGGQLTKAVRQHPYSVVLFDEIEKAHPDVFNILLQILEE 650
Query: 505 GRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEEL 564
GRLTD++GRTVDF+N ++IMTSNVG+ I +GF D ++ S IKS V EL
Sbjct: 651 GRLTDAQGRTVDFRNAVIIMTSNVGARDIVASA-PLGFAPD-NQVGLSDKEIKSRVMSEL 708
Query: 565 KQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVE 624
K+ FRPEFLNRLDE+IVF+ LTK ++ I ++M+ ++ DRL +++ + +TE R+ + +
Sbjct: 709 KKLFRPEFLNRLDEIIVFKSLTKDQIARIVELMVADLRDRLIEQNMTINLTEAARDHIAK 768
Query: 625 EGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNGSSGA 682
EG + + GARPLRRAI RLLED ++E++L E D ++DVD DG V GA
Sbjct: 769 EGTDTAMGARPLRRAIQRLLEDPISEQIL--EGTWVDGSVIDVDFDGEKLVFTPGEGA 824
>gi|297243559|ref|ZP_06927490.1| ATP-binding subunits of Clp [Gardnerella vaginalis AMD]
gi|296888310|gb|EFH27051.1| ATP-binding subunits of Clp [Gardnerella vaginalis AMD]
Length = 873
Score = 760 bits (1962), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 370/647 (57%), Positives = 508/647 (78%), Gaps = 8/647 (1%)
Query: 25 LEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLA 84
L+++G NLT A+EGKLDPV+GR +IERV+ +L RRTKNNP LIGEPGVGKTA+ EGLA
Sbjct: 174 LDQFGRNLTFEAQEGKLDPVIGRSEEIERVMVVLSRRTKNNPVLIGEPGVGKTAVVEGLA 233
Query: 85 QRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVH 144
Q+I GDVP+T++ K+V +LD+G ++AG++YRG+FEERLKK+++EIK +I+LFIDE+H
Sbjct: 234 QKIVEGDVPETLKNKQVYSLDLGSMIAGSRYRGDFEERLKKVLKEIKTRGDIVLFIDEIH 293
Query: 145 TLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEP 204
T++GAG+A+GA+ A+++LKP LARGELQ IGATT DEYRK+IEKD ALERRFQP++VPEP
Sbjct: 294 TIVGAGSADGALGASDMLKPMLARGELQTIGATTTDEYRKYIEKDAALERRFQPIQVPEP 353
Query: 205 SVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRV 264
++ ETI+ILKGLR RYE HH + TD AL S+A+LS +YI DR LPDKAIDLIDEAG+R+
Sbjct: 354 TIAETIEILKGLRSRYENHHHVTITDGALQSSAELSDRYIQDRHLPDKAIDLIDEAGARL 413
Query: 265 RLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKE 324
R++ P E +EL ++ +I+++K+EA++ QDFE+A LRD + L+ + + KE
Sbjct: 414 RIKRLTQPPELKELNHKIAKISEKKDEAIKQQDFEEAANLRDDQEKLENEAAE-----KE 468
Query: 325 MSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEA 384
+ E E+ +V VV E I +VS+ TGIPV K++ ES +LL+ME LHKR++GQDEA
Sbjct: 469 KAWREGES-NVKMVVDEDMIASVVSSTTGIPVVKLTQAESQKLLQMESELHKRIVGQDEA 527
Query: 385 VKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSE 444
V A++R+IRRARVGLK+P RP SFIF+GPTGVGK+ELAKALA + F + A+IR+DMSE
Sbjct: 528 VSALARSIRRARVGLKDPKRPSGSFIFAGPTGVGKTELAKALANFLFDDDNALIRVDMSE 587
Query: 445 FMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILED 504
F E++ S+L G+PPGYVGY EGG+LTE VRR+P++VVLFDEIEKAHPD+FN +LQ+L+D
Sbjct: 588 FAEKYAASRLFGAPPGYVGYEEGGELTEKVRRKPFSVVLFDEIEKAHPDIFNTLLQVLDD 647
Query: 505 GRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEEL 564
G LTD +GR VDFKNT++I+T+N+G+ I K GF L + DS+Y R+K V EL
Sbjct: 648 GHLTDGQGRKVDFKNTIIILTTNLGTRDIAKAA-NTGFTLG-NNADSTYQRMKDQVNSEL 705
Query: 565 KQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVE 624
K++FRPEFLNRLD+ IVFRQLT+ EV++I D+ +K + DRL + + L++T+ + + +
Sbjct: 706 KRHFRPEFLNRLDDTIVFRQLTEPEVRKIVDMDVKLLNDRLFDRHMSLEITDAAKNLLAQ 765
Query: 625 EGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDG 671
+G++P GARPLRR I R +ED+++EK+L E+ +G+ + VD + +G
Sbjct: 766 KGFDPLLGARPLRRVIQRDIEDTISEKILLGELSDGEHIKVDAEGEG 812
>gi|415709890|ref|ZP_11463469.1| ATPase AAA-2 domain protein [Gardnerella vaginalis 6420B]
gi|388055892|gb|EIK78777.1| ATPase AAA-2 domain protein [Gardnerella vaginalis 6420B]
Length = 867
Score = 759 bits (1961), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 370/647 (57%), Positives = 508/647 (78%), Gaps = 8/647 (1%)
Query: 25 LEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLA 84
L+++G NLT A+EGKLDPV+GR +IERV+ +L RRTKNNP LIGEPGVGKTA+ EGLA
Sbjct: 174 LDQFGRNLTFEAQEGKLDPVIGRSEEIERVMVVLSRRTKNNPVLIGEPGVGKTAVVEGLA 233
Query: 85 QRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVH 144
Q+I GDVP+T++ K+V +LD+G ++AG++YRG+FEERLKK+++EIK +I+LFIDE+H
Sbjct: 234 QKIVEGDVPETLKNKQVYSLDLGSMIAGSRYRGDFEERLKKVLKEIKTRGDIVLFIDEIH 293
Query: 145 TLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEP 204
T++GAG+A+GA+ A+++LKP LARGELQ IGATT DEYRK+IEKD ALERRFQP++VPEP
Sbjct: 294 TIVGAGSADGALGASDMLKPMLARGELQTIGATTTDEYRKYIEKDAALERRFQPIQVPEP 353
Query: 205 SVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRV 264
++ ETI+ILKGLR RYE HH + TD AL S+A+LS +YI DR LPDKAIDLIDEAG+R+
Sbjct: 354 TIAETIEILKGLRSRYENHHHVTITDGALQSSAELSDRYIQDRHLPDKAIDLIDEAGARL 413
Query: 265 RLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKE 324
R++ P E +EL ++ +I+++K+EA++ QDFE+A LRD + L+ + + KE
Sbjct: 414 RIKRLTQPPELKELNHKIAKISEKKDEAIKQQDFEEAANLRDDQEKLENEAAE-----KE 468
Query: 325 MSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEA 384
+ E E+ +V VV E I +VS+ TGIPV K++ ES +LL+ME LHKR++GQDEA
Sbjct: 469 KAWREGES-NVKMVVDEDMIASVVSSTTGIPVVKLTQAESQKLLQMESELHKRIVGQDEA 527
Query: 385 VKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSE 444
V A++R+IRRARVGLK+P RP SFIF+GPTGVGK+ELAKALA + F + A+IR+DMSE
Sbjct: 528 VSALARSIRRARVGLKDPKRPSGSFIFAGPTGVGKTELAKALANFLFDDDNALIRVDMSE 587
Query: 445 FMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILED 504
F E++ S+L G+PPGYVGY EGG+LTE VRR+P++VVLFDEIEKAHPD+FN +LQ+L+D
Sbjct: 588 FAEKYAASRLFGAPPGYVGYEEGGELTEKVRRKPFSVVLFDEIEKAHPDIFNTLLQVLDD 647
Query: 505 GRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEEL 564
G LTD +GR VDFKNT++I+T+N+G+ I K GF L + DS+Y R+K V EL
Sbjct: 648 GHLTDGQGRKVDFKNTIIILTTNLGTRDIAKAA-NTGFTLG-NNADSTYQRMKDQVNSEL 705
Query: 565 KQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVE 624
K++FRPEFLNRLD+ IVFRQLT+ EV++I D+ +K + DRL + + L++T+ + + +
Sbjct: 706 KRHFRPEFLNRLDDTIVFRQLTEPEVRKIVDMDVKLLNDRLFDRHMSLEITDAAKNLLAQ 765
Query: 625 EGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDG 671
+G++P GARPLRR I R +ED+++EK+L E+ +G+ + VD + +G
Sbjct: 766 KGFDPLLGARPLRRVIQRDIEDTISEKILLGELSDGEHIKVDAEGEG 812
>gi|419720434|ref|ZP_14247667.1| negative regulator of genetic competence ClpC/MecB
[Lachnoanaerobaculum saburreum F0468]
gi|383303387|gb|EIC94839.1| negative regulator of genetic competence ClpC/MecB
[Lachnoanaerobaculum saburreum F0468]
Length = 831
Score = 759 bits (1961), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 367/651 (56%), Positives = 508/651 (78%), Gaps = 11/651 (1%)
Query: 23 PTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEG 82
PTL++Y +LT LA EG+LDPV+GR + RV+QIL RRTKNNP LIGEPGVGKTA+ EG
Sbjct: 166 PTLDKYSRDLTDLAREGRLDPVIGRDNETNRVMQILSRRTKNNPVLIGEPGVGKTAVVEG 225
Query: 83 LAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDE 142
LA+RI S +VPDT+ K+++TLD+ ++AG+KYRGEFEER+KK++ E+ + ++LF+DE
Sbjct: 226 LAERIVSKEVPDTLLDKRLVTLDLPAMIAGSKYRGEFEERIKKVINEVLNAGNVLLFLDE 285
Query: 143 VHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVP 202
+HT+IGAG AEGA+DA+NILKP LARGELQ IGATT+DEYRKHIEKD ALERRFQP+ V
Sbjct: 286 LHTIIGAGGAEGAVDASNILKPLLARGELQLIGATTVDEYRKHIEKDSALERRFQPIMVE 345
Query: 203 EPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGS 262
EPS+++ +IL GL+ +YE HH + TD A+ SA +LS +YISDRFLPDKAIDL+DEA S
Sbjct: 346 EPSLEDATKILLGLKHKYEEHHAVSITDRAIESAVKLSKRYISDRFLPDKAIDLVDEAAS 405
Query: 263 RVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKG 322
+ R+ + PE+ +E++ E+ ++ KEK +AV ++FE+AGE+++++ LK + + +K
Sbjct: 406 KTRISNYMEPEKIKEIKAEIDKMEKEKEDAVGAEEFERAGEIKEKQERLKEKQDKIREKW 465
Query: 323 KEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQD 382
E K VV E +I +V+ WT IPV+K++ ++S RL +E+ LH+RV+GQD
Sbjct: 466 IEDKKNRK------LVVDEDEIADVVALWTKIPVKKITENDSQRLNNLEKVLHERVVGQD 519
Query: 383 EAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDM 442
EAV A++RAIRR RVGLK+P RPI SF+F GPTGVGK+EL+KALA FGSE A+IR+DM
Sbjct: 520 EAVSAVARAIRRGRVGLKDPKRPIGSFLFLGPTGVGKTELSKALAYSIFGSENALIRVDM 579
Query: 443 SEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQIL 502
SE+ME+H+VS+++GSPPGYVGY EGGQL+E VRR PY+V+LFDEIEKAHPDVFN++LQ+L
Sbjct: 580 SEYMEKHSVSRMVGSPPGYVGYEEGGQLSEKVRRNPYSVILFDEIEKAHPDVFNILLQVL 639
Query: 503 EDGRLTDSKGRTVDFKNTLLIMTSNVGSS-VIEKGGRRIGFDLDYDEKDSSYNRIKSLVT 561
+DG +TDS GR VDFKNT++I+TSN G+ +IE +++GF + D+K Y+ +K+ V
Sbjct: 640 DDGHITDSSGRMVDFKNTVIILTSNAGAQRIIEP--KQLGFASNSDDK-KDYSDMKNSVM 696
Query: 562 EELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTK-DIELQVTERFRE 620
EE+KQ F+PEFLNR+DE IVF QLTK ++KEI DI+LKE+ RL + + L++T++ +E
Sbjct: 697 EEVKQMFKPEFLNRIDETIVFHQLTKEDLKEILDILLKEINSRLDEQMQMNLRLTDKAKE 756
Query: 621 RVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDG 671
++++GY+ YGARPL+RA+ +ED +AE++L IK+GD + +D +G
Sbjct: 757 FLIDKGYDKKYGARPLKRALQNEIEDRLAEQILFGNIKQGDKIKIDCKGEG 807
>gi|260578411|ref|ZP_05846325.1| ATP-dependent Clp protease, ATP-binding subunit ClpC
[Corynebacterium jeikeium ATCC 43734]
gi|258603433|gb|EEW16696.1| ATP-dependent Clp protease, ATP-binding subunit ClpC
[Corynebacterium jeikeium ATCC 43734]
Length = 885
Score = 759 bits (1961), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/673 (56%), Positives = 519/673 (77%), Gaps = 19/673 (2%)
Query: 2 VGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRR 61
VG S E GA G N + L+++G NLT+ A++GKLDPVVGR+ +IERV+Q+L RR
Sbjct: 162 VGSSPE--GAPSRPGQKSNSL-VLDQFGRNLTQAAKDGKLDPVVGRENEIERVMQVLSRR 218
Query: 62 TKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEE 121
TKNNP LIGEPGVGKTA+ EGLA I +G VP+T++ K++ +LD+G LVAG++YRG+FEE
Sbjct: 219 TKNNPVLIGEPGVGKTAVVEGLALDIVNGKVPETLKDKQLYSLDLGSLVAGSRYRGDFEE 278
Query: 122 RLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDE 181
RLKK+++EI Q +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDE
Sbjct: 279 RLKKVLKEINQRGDIILFIDEIHTLVGAGAAEGAIDAASILKPKLARGELQTIGATTLDE 338
Query: 182 YRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSY 241
YRKHIEKD ALERRFQPV+VPEPSV+ T++ILKGLR+RYE HH++ TD AL +AAQL+
Sbjct: 339 YRKHIEKDAALERRFQPVQVPEPSVELTVEILKGLRDRYEAHHRVSITDGALKAAAQLAD 398
Query: 242 QYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKA 301
+YI+DRFLPDKA+DLIDEAG+R+R++ P+ ++++ ++ ++ ++K A+ QDFEKA
Sbjct: 399 RYINDRFLPDKAVDLIDEAGARMRIKRMTAPKAIQDIDDKIAEVRRKKEAAIDEQDFEKA 458
Query: 302 GELRDREMDLKAQISALVDKGKEMSKAE--TEAGDVGPV--VTEVDIQHIVSAWTGIPVE 357
LRD E L G+E ++ E AG++ V V E I ++ WTGIPV
Sbjct: 459 ASLRDDERKL----------GEERAEKEKAWRAGELDEVAEVGEEQIAEVMGNWTGIPVF 508
Query: 358 KVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGV 417
K++ +ES RLL ME+ LHKR+IGQD+AVKA+SRAIRR R GLK+P RP SFIF+GP+GV
Sbjct: 509 KLTEEESTRLLHMEDELHKRIIGQDDAVKAVSRAIRRTRAGLKDPKRPSGSFIFAGPSGV 568
Query: 418 GKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRR 477
GK+EL+KALA + FG ++A+I++DM EF ++ T S+L G+PPGYVGY EGGQLTE VRR+
Sbjct: 569 GKTELSKALAEFLFGDDDALIQIDMGEFHDKFTASRLFGAPPGYVGYDEGGQLTEKVRRK 628
Query: 478 PYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGG 537
P++VVLFDEIEKAH +++N +LQ+LEDGRLTD +GR VDFKNT+LI TSN+G+ I K
Sbjct: 629 PFSVVLFDEIEKAHTEIYNTLLQVLEDGRLTDGQGRMVDFKNTVLIFTSNLGTRDISK-A 687
Query: 538 RRIGFDLDYD-EKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADI 596
+GF + ++++ Y R+K V +ELK++FRPEFLNR+D+++VF QLT+ ++ ++ D+
Sbjct: 688 VGMGFSSSGEADEETQYERMKQKVDDELKKHFRPEFLNRIDDIVVFHQLTREQIVQMVDL 747
Query: 597 MLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLARE 656
+L V L+ KD++L++TE+ + + + G++P GARPLRR I R +ED ++EK+L E
Sbjct: 748 LLGRVRTALQAKDMDLELTEQAKSLLAKRGFDPVLGARPLRRTIQREIEDQLSEKILFGE 807
Query: 657 IKEGDSVIVDVDS 669
I G+ V VDV++
Sbjct: 808 IGAGEIVTVDVEN 820
>gi|291534335|emb|CBL07447.1| ATPases with chaperone activity, ATP-binding subunit [Roseburia
intestinalis M50/1]
Length = 815
Score = 759 bits (1961), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 373/652 (57%), Positives = 509/652 (78%), Gaps = 11/652 (1%)
Query: 18 SGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKT 77
+ + P L +Y +LT LA EG LDP+VGRQ +I RV+QIL RRTKNNPCLIGEPGVGKT
Sbjct: 163 TASDTPVLNQYSRDLTALAAEGVLDPLVGRQEEIGRVIQILSRRTKNNPCLIGEPGVGKT 222
Query: 78 AIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEII 137
AI EG+A+RI +G VPDT+ GK+V++LDM +VAG+KYRGEFEER+KK+++E++ + I+
Sbjct: 223 AIVEGIAERITTGMVPDTVAGKRVVSLDMSGIVAGSKYRGEFEERIKKVLQEVRAAGNIL 282
Query: 138 LFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQ 197
LFIDE+HT+IGAG AEGAIDA+NILKP+LARGELQ IGATT+DEYRK+IEKD ALERRFQ
Sbjct: 283 LFIDELHTIIGAGGAEGAIDASNILKPALARGELQLIGATTIDEYRKYIEKDAALERRFQ 342
Query: 198 PVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLI 257
PV V EPS +E +QIL+GLRE+YE HH+++ TD+A+ +A +LS +YI+DRFLPDKAIDL+
Sbjct: 343 PVTVEEPSEEEAVQILEGLREQYEKHHQVKITDDAVSAAVRLSARYINDRFLPDKAIDLM 402
Query: 258 DEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISA 317
DEA ++VRLR PEE EL + + +E E + D E A + ++ + + +++
Sbjct: 403 DEAAAKVRLRAGGKPEEVVELRHRINLLEEEMLEFLHDGDVEGAKQKKNEKEACEEELAK 462
Query: 318 LVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKR 377
+ K K+ S+++ VTE DI +VS WT IPV K++ E+ RL K+E TLHKR
Sbjct: 463 IQAKTKKDSRSKKLK------VTEDDIADVVSGWTKIPVRKIAEGEAARLRKLEATLHKR 516
Query: 378 VIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAM 437
VIGQ++AV A+++A+RR RVGLK+P RPI SF+F GPTGVGK+E++KALA FGSE++M
Sbjct: 517 VIGQEDAVSAVAKAVRRGRVGLKDPRRPIGSFLFLGPTGVGKTEISKALAEAVFGSEQSM 576
Query: 438 IRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNM 497
IR+DMSE+ME+H+VSK+IGSPPGYVG+ EGGQL+E VRR PY+V+LFDEIEKAHPDVFN+
Sbjct: 577 IRVDMSEYMEKHSVSKMIGSPPGYVGHEEGGQLSEKVRRNPYSVILFDEIEKAHPDVFNI 636
Query: 498 MLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGS-SVIEKGGRRIGFDLDYDEKDSSYNRI 556
+LQ+L+DG +TDS+GR VDFKNT++IMTSN G+ ++IE +++GF + DEK +Y+R+
Sbjct: 637 LLQVLDDGHITDSQGRKVDFKNTIIIMTSNAGAQAIIEP--KKLGFAVSDDEK-QNYDRM 693
Query: 557 KSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRL-KTKDIELQVT 615
K+ V EE+++ F+PEFLNR+DE IVFR L K ++K+I +MLKE+ DR K I L V
Sbjct: 694 KNSVMEEVRRIFKPEFLNRIDETIVFRALNKDDMKQIVALMLKELTDRCEKQMGIHLTVR 753
Query: 616 ERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDV 667
+ ++ +V++ Y+P YGARPLRR I +ED +AE++L+ ++K+ V+V +
Sbjct: 754 DSVKKHIVDKAYDPKYGARPLRRQIQNDIEDELAEEILSGKVKKDTEVVVTI 805
>gi|373468461|ref|ZP_09559713.1| negative regulator of genetic competence ClpC/MecB [Lachnospiraceae
bacterium oral taxon 082 str. F0431]
gi|371766197|gb|EHO54464.1| negative regulator of genetic competence ClpC/MecB [Lachnospiraceae
bacterium oral taxon 082 str. F0431]
Length = 831
Score = 759 bits (1961), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 367/658 (55%), Positives = 508/658 (77%), Gaps = 9/658 (1%)
Query: 15 GGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGV 74
G SS PTL++Y +LT LA EG+LDPV+GR + RV+QIL RRTKNNP LIGEPGV
Sbjct: 158 GKSSSLSTPTLDKYSRDLTDLAREGRLDPVIGRDNETNRVMQILSRRTKNNPVLIGEPGV 217
Query: 75 GKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSD 134
GKTA+ EGLA+RI S +VPDT+ K+++TLD+ ++AG+KYRGEFEER+KK++ E+ +
Sbjct: 218 GKTAVVEGLAERIVSKEVPDTLLDKRLVTLDLPAMIAGSKYRGEFEERIKKVINEVLNAG 277
Query: 135 EIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALER 194
++LF+DE+HT+IGAG AEGA+DA+NILKP LARGELQ IGATT+DEYRKHIEKD ALER
Sbjct: 278 NVLLFLDELHTIIGAGGAEGAVDASNILKPLLARGELQLIGATTIDEYRKHIEKDSALER 337
Query: 195 RFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAI 254
RFQP+ V EPS+++ +IL GL+ +YE HH + TD+A+ SA +LS +YISDRFLPDKAI
Sbjct: 338 RFQPIIVEEPSLEDATKILLGLKHKYEEHHAVSITDKAIESAVKLSKRYISDRFLPDKAI 397
Query: 255 DLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQ 314
DL+DEA S+ R+ + PE+ +EL+ E+ ++ KEK +AV ++FE+AGE+++++ L+ +
Sbjct: 398 DLVDEAASKTRISNYMEPEKIKELKAEIDKMEKEKEDAVGAEEFERAGEIKEKQEKLREK 457
Query: 315 ISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETL 374
+ +K E + + VV E +I +V+ WT IPV+K++ ++S RL +E+ L
Sbjct: 458 QDKIREKWMEDKRNKK------LVVDEDEIADVVALWTKIPVKKITENDSQRLSNLEKVL 511
Query: 375 HKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSE 434
H+RV+GQ EAV A++RAIRR RVGLK+P RPI SF+F GPTGVGK+EL+KALA FGSE
Sbjct: 512 HERVVGQQEAVSAVARAIRRGRVGLKDPKRPIGSFLFLGPTGVGKTELSKALAYSMFGSE 571
Query: 435 EAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDV 494
A+IR+DMSE+ME+H+VSK++GSPPGYVGY EGGQL+E VRR PY+V+LFDEIEKAHPDV
Sbjct: 572 NALIRVDMSEYMEKHSVSKMVGSPPGYVGYEEGGQLSEKVRRNPYSVILFDEIEKAHPDV 631
Query: 495 FNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYN 554
FN++LQ+L+DG +TDS GR +DFKNT++I+TSN G+ I + +++GF D+K Y+
Sbjct: 632 FNILLQVLDDGHITDSSGRMIDFKNTVIILTSNAGAQRIVE-PKQLGFASSSDDK-KDYS 689
Query: 555 RIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTK-DIELQ 613
+K+ V EE+KQ F+PEFLNR+DE IVF QLTK +KEI DI+L E+ RL + + L+
Sbjct: 690 DMKNSVMEEVKQMFKPEFLNRIDETIVFHQLTKENLKEILDILLNEINSRLDEQMQMNLR 749
Query: 614 VTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDG 671
++++ +E ++++GY+ YGARPL+RA+ +ED MAE++L IK+GD + VD +G
Sbjct: 750 LSDKAKEFLIDKGYDKKYGARPLKRALQNEIEDRMAEQILLGNIKQGDKIKVDCKGEG 807
>gi|160931710|ref|ZP_02079104.1| hypothetical protein CLOLEP_00542 [Clostridium leptum DSM 753]
gi|156869355|gb|EDO62727.1| ATPase family associated with various cellular activities (AAA)
[Clostridium leptum DSM 753]
Length = 820
Score = 759 bits (1961), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/643 (58%), Positives = 510/643 (79%), Gaps = 7/643 (1%)
Query: 24 TLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGL 83
TL+++G +LT+ A +G++DPV+GRQ +IERVVQIL RRTKNNPCLIGEPGVGKTA+AEGL
Sbjct: 169 TLDQFGRDLTEQARKGEIDPVIGRQMEIERVVQILSRRTKNNPCLIGEPGVGKTAVAEGL 228
Query: 84 AQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEV 143
A +I SG+VP+ ++ K++++LD+ ++AGTKYRG+FE+R+K +EE+K++ +ILFIDE+
Sbjct: 229 ALQIVSGNVPELLKDKRLVSLDLTGMIAGTKYRGDFEDRIKNAIEEVKKAGNVILFIDEL 288
Query: 144 HTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPE 203
HT+IGAGAAEG+ DAANILKP+LARG+ Q IGATT+DEYRKHIEKD ALERRFQPV V E
Sbjct: 289 HTIIGAGAAEGSADAANILKPALARGDFQVIGATTIDEYRKHIEKDAALERRFQPVMVGE 348
Query: 204 PSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSR 263
P+V E ILKGLR+RYE HHK++ TDEA+ +A +LS +YISDR+LPDKAIDLIDEA SR
Sbjct: 349 PTVQEAAAILKGLRDRYEAHHKVKITDEAIEAAVELSSRYISDRYLPDKAIDLIDEAASR 408
Query: 264 VRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGK 323
VRLR +P++ ++LE++ +++ +EK AV QDFE+A LRD LK Q+ ++ +
Sbjct: 409 VRLRCYTVPDDLQQLEEKSKELEQEKAAAVNSQDFERAASLRDEVRHLKQQLEEQRNQWR 468
Query: 324 EMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDE 383
+ ++ G VT DI IVS+WTG+PV +++ +ES RLL++EE LH+R++GQ E
Sbjct: 469 DKNERS------GDEVTAKDIAQIVSSWTGVPVVQLTEEESQRLLRLEEILHQRIVGQKE 522
Query: 384 AVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMS 443
AV A++RAIRR RVGLK+P RPI SF+F GPTGVGK+EL KALA FG E+AMIR+DMS
Sbjct: 523 AVAAVARAIRRGRVGLKDPKRPIGSFLFLGPTGVGKTELCKALAQAMFGDEKAMIRMDMS 582
Query: 444 EFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILE 503
E+ME+HTVS++IGSPPGYVGY EGGQLTE +RR+PY+VVLFDEIEKAHPDVF+++LQILE
Sbjct: 583 EYMEKHTVSRMIGSPPGYVGYQEGGQLTEKIRRKPYSVVLFDEIEKAHPDVFHLLLQILE 642
Query: 504 DGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEE 563
DG+LTDS+GRTVDFKN ++IMTSN+G+ +I + +GF D + +++ ++ V EE
Sbjct: 643 DGQLTDSQGRTVDFKNAVVIMTSNIGARLITENRLNLGFSAD-NSQEADQKVMRDKVMEE 701
Query: 564 LKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVV 623
LK+ FRPEFLNR+D++IVF++LT+ E+++IA ML ++ RL+ + L+ TE +
Sbjct: 702 LKKAFRPEFLNRIDDIIVFQKLTQEEIQQIAVHMLNDLKARLEPLGVSLEFTEEAVRTIA 761
Query: 624 EEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVD 666
+ G++P YGARPLRR I +ED ++E++LA ++K G + + D
Sbjct: 762 KAGFDPVYGARPLRREIQTKVEDPLSEELLAGDLKAGGTAVCD 804
>gi|315651740|ref|ZP_07904745.1| ABC superfamily ATP binding cassette transporter ABC protein
[Lachnoanaerobaculum saburreum DSM 3986]
gi|315485995|gb|EFU76372.1| ABC superfamily ATP binding cassette transporter ABC protein
[Lachnoanaerobaculum saburreum DSM 3986]
Length = 831
Score = 759 bits (1961), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 367/651 (56%), Positives = 508/651 (78%), Gaps = 11/651 (1%)
Query: 23 PTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEG 82
PTL++Y +LT LA EG+LDPV+GR + RV+QIL RRTKNNP LIGEPGVGKTA+ EG
Sbjct: 166 PTLDKYSRDLTDLAREGRLDPVIGRDNETNRVMQILSRRTKNNPVLIGEPGVGKTAVVEG 225
Query: 83 LAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDE 142
LA+RI S +VPDT+ K+++TLD+ ++AG+KYRGEFEER+KK++ E+ + ++LF+DE
Sbjct: 226 LAERIVSKEVPDTLFDKRLVTLDLPAMIAGSKYRGEFEERIKKVINEVLNAGNVLLFLDE 285
Query: 143 VHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVP 202
+HT+IGAG AEGA+DA+NILKP LARGELQ IGATT+DEYRKHIEKD ALERRFQP+ V
Sbjct: 286 LHTIIGAGGAEGAVDASNILKPLLARGELQLIGATTVDEYRKHIEKDSALERRFQPIMVE 345
Query: 203 EPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGS 262
EPS+++ +IL GL+ +YE HH + TD A+ SA +LS +YISDRFLPDKAIDL+DEA S
Sbjct: 346 EPSLEDATKILLGLKHKYEEHHAVSITDRAIESAVKLSKRYISDRFLPDKAIDLVDEAAS 405
Query: 263 RVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKG 322
+ R+ + PE+ +E++ E+ ++ KEK +AV ++FE+AGE+++++ LK + + +K
Sbjct: 406 KTRISNYMEPEKIKEIKAEIDKMEKEKEDAVGAEEFERAGEIKEKQERLKEKQDKIREKW 465
Query: 323 KEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQD 382
E K VV E +I +V+ WT IPV+K++ ++S RL +E+ LH+RV+GQD
Sbjct: 466 IEDKKNRK------LVVDEDEIADVVALWTKIPVKKITENDSQRLNNLEKVLHERVVGQD 519
Query: 383 EAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDM 442
EAV A++RAIRR RVGLK+P RPI SF+F GPTGVGK+EL+KALA FGSE A+IR+DM
Sbjct: 520 EAVSAVARAIRRGRVGLKDPKRPIGSFLFLGPTGVGKTELSKALAYSIFGSENALIRVDM 579
Query: 443 SEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQIL 502
SE+ME+H+VS+++GSPPGYVGY EGGQL+E VRR PY+V+LFDEIEKAHPDVFN++LQ+L
Sbjct: 580 SEYMEKHSVSRMVGSPPGYVGYEEGGQLSEKVRRNPYSVILFDEIEKAHPDVFNILLQVL 639
Query: 503 EDGRLTDSKGRTVDFKNTLLIMTSNVGSS-VIEKGGRRIGFDLDYDEKDSSYNRIKSLVT 561
+DG +TDS GR VDFKNT++I+TSN G+ +IE +++GF + D+K Y+ +K+ V
Sbjct: 640 DDGHITDSSGRMVDFKNTVIILTSNAGAQRIIEP--KQLGFASNSDDK-KDYSDMKNSVM 696
Query: 562 EELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTK-DIELQVTERFRE 620
EE+KQ F+PEFLNR+DE IVF QLTK ++KEI DI+LKE+ RL + + L++T++ +E
Sbjct: 697 EEVKQMFKPEFLNRIDETIVFHQLTKEDLKEILDILLKEINSRLDEQMQMNLRLTDKAKE 756
Query: 621 RVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDG 671
++++GY+ YGARPL+RA+ +ED +AE++L IK+GD + +D +G
Sbjct: 757 FLIDKGYDKKYGARPLKRALQNEIEDRLAEQILFGNIKQGDKIKIDCKGEG 807
>gi|257064641|ref|YP_003144313.1| chaperone ATPase [Slackia heliotrinireducens DSM 20476]
gi|256792294|gb|ACV22964.1| ATPase with chaperone activity, ATP-binding subunit [Slackia
heliotrinireducens DSM 20476]
Length = 865
Score = 759 bits (1961), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/657 (56%), Positives = 507/657 (77%), Gaps = 8/657 (1%)
Query: 14 GGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPG 73
G G S N+ L+E+GT+LT A++G LDPV+GR +IERV+Q+L RR KNNP LIGEPG
Sbjct: 165 GTGESANESSMLDEFGTDLTAKAKKGLLDPVIGRSAEIERVLQVLSRRQKNNPLLIGEPG 224
Query: 74 VGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQS 133
VGKTA+ EGLA+ + +G VPD I K++ITLD+ LVAG+KYRGEFEERLKK+++E+ +S
Sbjct: 225 VGKTAVVEGLAELVVAGQVPDIIADKRIITLDVSALVAGSKYRGEFEERLKKVIKEVIKS 284
Query: 134 DEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALE 193
++ILFIDE+HT+IGAG+AEG+IDAA ILKP L+RGE+Q IGATT++EYRKH+EKD ALE
Sbjct: 285 KDVILFIDEMHTIIGAGSAEGSIDAAAILKPPLSRGEIQVIGATTIEEYRKHLEKDSALE 344
Query: 194 RRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKA 253
RRFQ V V EP+ ++TI+IL+GLR+RYE HH + +TDEAL +A +S +Y+ DRFLPDKA
Sbjct: 345 RRFQTVMVNEPTEEQTIRILEGLRDRYEAHHHVHFTDEALHAAVTMSMRYVQDRFLPDKA 404
Query: 254 IDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKA 313
ID++DEAG+R R+R+ LP+E REL+ E+R++ ++ AV Q++E+A LRD+E +L+
Sbjct: 405 IDVLDEAGARARIRNRTLPDEVRELDDEIRKVRNDRESAVSKQEYEEAARLRDKEKELQE 464
Query: 314 QISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEET 373
+ + + M KA EA V E DI I+S TG+PV ++ E+ +LL+MEE
Sbjct: 465 K------REEVMKKAAEEADRTITEVGEKDIADIISMSTGVPVSNLTEAETSKLLRMEEV 518
Query: 374 LHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGS 433
LH+R+IGQDEAV A+S+AIRR+R GLK+P RP SFIF GP+GVGK+EL+KALA + F S
Sbjct: 519 LHERIIGQDEAVTALSKAIRRSRSGLKDPRRPAGSFIFLGPSGVGKTELSKALAEFLFNS 578
Query: 434 EEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPD 493
EEA++ DMSE+ME+H+VS+L+GSPPGYVG+ EGGQLT+AVR+RPY+V+LFDEIEKAHPD
Sbjct: 579 EEALVSFDMSEYMEKHSVSRLVGSPPGYVGFDEGGQLTKAVRQRPYSVLLFDEIEKAHPD 638
Query: 494 VFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSY 553
VFN++LQILE+GRLTDS+GR+VDF+NT++IMTSNVG+ I + +GF + +K S
Sbjct: 639 VFNILLQILEEGRLTDSQGRSVDFRNTIVIMTSNVGARDIAQTA-PLGFAPE-SQKGLSD 696
Query: 554 NRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQ 613
I S V ELK+ FRPEFLNRLDE+IVF+ LT ++ +I D+M+ ++ DRL +D+ +
Sbjct: 697 KEINSRVMSELKKLFRPEFLNRLDEIIVFKSLTPEQILQIVDLMVADLRDRLIEQDMTIN 756
Query: 614 VTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSD 670
+T + + +EG + + GARPLRRAI RLLED ++E++L K G + VDV D
Sbjct: 757 LTPAASKFIADEGTDVAMGARPLRRAIQRLLEDPISEQILDGTWKAGSVIDVDVKDD 813
>gi|57233578|ref|YP_180810.1| ATP-dependent Clp protease, ATP-binding subunit ClpC
[Dehalococcoides ethenogenes 195]
gi|57224026|gb|AAW39083.1| ATP-dependent Clp protease, ATP-binding subunit ClpC
[Dehalococcoides ethenogenes 195]
Length = 824
Score = 759 bits (1960), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 372/660 (56%), Positives = 502/660 (76%), Gaps = 9/660 (1%)
Query: 14 GGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPG 73
G ++ ++ P L++ G +LT A GKLDPV+GR +IERVVQIL RRTKNNP LIGEPG
Sbjct: 154 AGRATPSRTPQLDQLGFDLTAAARTGKLDPVIGRAKEIERVVQILSRRTKNNPALIGEPG 213
Query: 74 VGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQS 133
VGKT+I EGLAQRI SGDVP+T+E K +I+LD+ LVAGTKYRGEFEERLKK++EEIK +
Sbjct: 214 VGKTSIVEGLAQRIVSGDVPETLEQKHIISLDVASLVAGTKYRGEFEERLKKVIEEIKTA 273
Query: 134 DEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALE 193
IILFIDE HT++GAGAAEGA+DAANILKPSLARGE+Q IGATTLD++RK++E+D A E
Sbjct: 274 GNIILFIDEFHTMVGAGAAEGAVDAANILKPSLARGEVQVIGATTLDDFRKYVERDAAFE 333
Query: 194 RRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKA 253
RRFQPV V EP++++T+ IL+G++ERYE HHKL ++EA+V+AA ++ +YI DRFLPDKA
Sbjct: 334 RRFQPVLVEEPAIEDTLSILRGIKERYEEHHKLIISEEAIVAAANMAARYIPDRFLPDKA 393
Query: 254 IDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKA 313
IDL+DEA SRVR++ P +E++ ++K A+ Q ++ A ELR+RE+ +
Sbjct: 394 IDLVDEAASRVRIKKRTKPVSLKEMKAIEDSYRRDKEAALATQQYDYASELRERELQIAE 453
Query: 314 QISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEET 373
+I + D+ + E PVV E DI +VS WTG+P+ +++ DE++RLL MEE
Sbjct: 454 KIRRMEDEW------QNEQAMDKPVVGEEDIAQVVSMWTGVPLVQLTGDETERLLHMEEA 507
Query: 374 LHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGS 433
LH+R+IGQ+EA+ IS+A+RRAR GLK+P PI +F+F GPTGVGK+ELA+ALA + FGS
Sbjct: 508 LHERIIGQEEAIVTISKAVRRARAGLKDPRHPIGNFVFLGPTGVGKTELARALAQFMFGS 567
Query: 434 EEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPD 493
E+A++RLDMSEFME+ VS+L+G+PPGYVGY EGGQLTEAVRR+ Y ++L DEIEKAHPD
Sbjct: 568 EDALVRLDMSEFMEKFAVSRLVGAPPGYVGYDEGGQLTEAVRRKSYCLILLDEIEKAHPD 627
Query: 494 VFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDE---KD 550
VFN++LQI +DG LTD+KGR VDF+NT++IMTSN+G+ +I KG IGF DE +
Sbjct: 628 VFNILLQIFDDGHLTDTKGRRVDFRNTIIIMTSNIGAELIRKGSGTIGFATQTDESKAQQ 687
Query: 551 SSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDI 610
+++ +K + ELK+ FRPEFLNR+D ++VF L K +++ I D+MLK V ++ K I
Sbjct: 688 TNFEHMKDKLLGELKKSFRPEFLNRIDSVVVFHSLNKEQIRSIVDLMLKSVIKQMSEKGI 747
Query: 611 ELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSD 670
L+VT+ ++ + ++GY+ YGARPLRR I +LED ++E +L + + GD VIVD D
Sbjct: 748 GLEVTDSAKDLLGKKGYDEVYGARPLRRTIQTMLEDRLSEDLLRAKFEAGDKVIVDTAED 807
>gi|420237566|ref|ZP_14742031.1| Clp protease [Parascardovia denticolens IPLA 20019]
gi|391879188|gb|EIT87700.1| Clp protease [Parascardovia denticolens IPLA 20019]
Length = 862
Score = 759 bits (1960), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 367/664 (55%), Positives = 521/664 (78%), Gaps = 8/664 (1%)
Query: 8 AVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPC 67
A GV ++ + L+++G NLT+ A++GKLDPV+GR +IERV+ +L RRTKNNP
Sbjct: 155 ANSGGVADKTNRSGSSLLDQFGRNLTQEAKDGKLDPVIGRSNEIERVMVVLSRRTKNNPV 214
Query: 68 LIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLM 127
LIGEPGVGKTA+ EGLA++I + DVP+T++ K++ LD+G ++AG++YRG+FEERLKK++
Sbjct: 215 LIGEPGVGKTAVVEGLAEKIVADDVPETLKDKQIYALDLGSMIAGSRYRGDFEERLKKVL 274
Query: 128 EEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIE 187
+EI+ +++LFIDE+HT++GAG+A+GA+ A+++LKP LARGELQ IGATT +EYRK+IE
Sbjct: 275 KEIQVRGDVVLFIDEIHTIVGAGSADGAMGASDMLKPMLARGELQTIGATTTEEYRKYIE 334
Query: 188 KDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDR 247
KD ALERRFQP++V EP++ ETI+ILKGLR++YE HH + TDEA+ +AA+LS +YI DR
Sbjct: 335 KDAALERRFQPIQVAEPTIAETIEILKGLRKKYEDHHHVTITDEAIQAAAELSARYIQDR 394
Query: 248 FLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDR 307
LPDKAIDLIDEAG+R+R++ P +EL+ ++ ++ +K++A+ QDFEKA LRD
Sbjct: 395 HLPDKAIDLIDEAGARLRIKRLTAPSALKELDMKVAKVKADKDQAIADQDFEKAASLRDA 454
Query: 308 EMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRL 367
+ L+ + K KE S E E+ DV VVTE I H++S+ TGIPV K++ ES +L
Sbjct: 455 QEKLEQE-----RKDKEKSWREGES-DVSMVVTEDTIAHVISSSTGIPVFKLTETESKKL 508
Query: 368 LKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALA 427
L ME++LHKRVIGQDEAV A++R+IRRARVGLK+P RP SFIF+GPTGVGK+ELAKALA
Sbjct: 509 LGMEDSLHKRVIGQDEAVSALARSIRRARVGLKDPRRPSGSFIFAGPTGVGKTELAKALA 568
Query: 428 AYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEI 487
Y F E+A+IR+DMSEF E+++ S+L G+PPGYVGY EGG+LTE VRR+P++V+LFDEI
Sbjct: 569 EYLFDDEDALIRVDMSEFGEKYSTSRLFGAPPGYVGYEEGGELTEKVRRKPFSVILFDEI 628
Query: 488 EKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYD 547
EKAHPD+FN +LQ+L+DG LTD +GR VDFKNT++IMT+N+G+S I + + GF+L
Sbjct: 629 EKAHPDIFNTLLQVLDDGHLTDGQGRKVDFKNTIIIMTTNLGTSKISQ-AQNTGFNLG-G 686
Query: 548 EKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKT 607
+ ++SY R+K V ELK FRPEFLNRLD++IVF+QLT+ +V++I D+ +K + DRL
Sbjct: 687 QTETSYQRMKDQVQSELKGQFRPEFLNRLDDIIVFKQLTEPQVRQIVDLDVKALNDRLFE 746
Query: 608 KDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDV 667
+ + +++T++ ++ + E+G++P GARPLRR I R +ED+++EK+L ++KE ++VD
Sbjct: 747 RHMTVELTDKAKDLLAEKGFDPLLGARPLRRVIQRDIEDAISEKILLGDLKENQEIVVDA 806
Query: 668 DSDG 671
+ +G
Sbjct: 807 EGEG 810
>gi|255325858|ref|ZP_05366950.1| negative regulator of genetic competence ClpC/mecB [Corynebacterium
tuberculostearicum SK141]
gi|255297070|gb|EET76395.1| negative regulator of genetic competence ClpC/mecB [Corynebacterium
tuberculostearicum SK141]
Length = 922
Score = 759 bits (1960), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/673 (55%), Positives = 517/673 (76%), Gaps = 17/673 (2%)
Query: 25 LEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLA 84
L+++G NLT+ A++GKLDPVVGR+ ++ER++Q+L RRTKNNP LIGEPGVGKTA+ EGLA
Sbjct: 191 LDQFGRNLTQAAKDGKLDPVVGRESEVERIMQVLSRRTKNNPVLIGEPGVGKTAVVEGLA 250
Query: 85 QRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVH 144
I +G VP+T++ K++ +LD+G LVAG++YRG+FEERLKK+++EI Q +IILFIDE+H
Sbjct: 251 LDIVNGKVPETLKDKQLYSLDLGSLVAGSRYRGDFEERLKKVLKEINQRGDIILFIDEIH 310
Query: 145 TLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEP 204
TL+GAGAAEGAIDAA++LKP LARGELQ IGATTL+EYRKHIEKD ALERRFQPVKV EP
Sbjct: 311 TLVGAGAAEGAIDAASLLKPKLARGELQTIGATTLEEYRKHIEKDAALERRFQPVKVEEP 370
Query: 205 SVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRV 264
S+D+T ILKGLR++YE HH++ YTDEAL +AA LS +YI+DRFLPDKA+DL+DEAG+R+
Sbjct: 371 SLDDTFLILKGLRDKYEAHHRVSYTDEALHAAASLSDRYINDRFLPDKAVDLLDEAGARM 430
Query: 265 RLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKE 324
R++ P+ RE++ + ++ KEK A+ QDFEKA LRD+E L G+E
Sbjct: 431 RIKRMTAPKGLREVDDRIAEVRKEKEAAIDAQDFEKAAGLRDKERKL----------GEE 480
Query: 325 MSKAETE--AGDVGPV--VTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIG 380
++ E + +GD+ + V E I +++ WTGIPV K++ ES+RLL MEE LHKR+IG
Sbjct: 481 RAEKEKQWRSGDLEEIAEVGEDQIAEVLAHWTGIPVLKLTEKESNRLLNMEEELHKRIIG 540
Query: 381 QDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRL 440
QDEAVK++SRAIRR R GLK+P RP SFIF+GP+GVGK+EL+K+LA + FGS++ +I++
Sbjct: 541 QDEAVKSVSRAIRRTRAGLKDPRRPSGSFIFAGPSGVGKTELSKSLANFLFGSDDDLIQI 600
Query: 441 DMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQ 500
DM EF +R T S+L G+PPGYVGY EGGQLTE VRR+P++VVLFDEIEKAH +++N +LQ
Sbjct: 601 DMGEFHDRFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHKEIYNTLLQ 660
Query: 501 ILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFD-LDYDEKDSSYNRIKSL 559
+LEDGRLTD +GR VDFKNT+LI TSN+G+ I K +GF ++ D+ Y+R+K
Sbjct: 661 VLEDGRLTDGQGRVVDFKNTVLIFTSNLGTQDISK-PVGLGFTGSSENDSDAQYDRMKQK 719
Query: 560 VTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFR 619
V +ELK++FRPEFLNR+D+++VF QLT+ ++ E+ ++++ V +L +D+ +++T++ +
Sbjct: 720 VNDELKKHFRPEFLNRIDDIVVFHQLTQEQIVEMVELLIGRVAKQLDERDMGIELTQKAK 779
Query: 620 ERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDS-DGNVTVLNG 678
+ + + G++P GARPLRR I R +ED ++EK+L EI G+ + VDV+ DG G
Sbjct: 780 DLLAKRGFDPVLGARPLRRTIQREIEDQLSEKILFGEIGAGEIITVDVEGWDGESKDNTG 839
Query: 679 SSGAPESLADPLP 691
+ PLP
Sbjct: 840 AKFTFSPRPKPLP 852
>gi|308232509|ref|ZP_07416289.2| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis SUMu001]
gi|308371394|ref|ZP_07424826.2| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis SUMu003]
gi|308372592|ref|ZP_07429192.2| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis SUMu004]
gi|308373956|ref|ZP_07434280.2| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis SUMu006]
gi|308374925|ref|ZP_07442106.2| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis SUMu007]
gi|308376170|ref|ZP_07437892.2| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis SUMu008]
gi|308378380|ref|ZP_07482390.2| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis SUMu009]
gi|308379552|ref|ZP_07486731.2| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis SUMu010]
gi|308380740|ref|ZP_07490948.2| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis SUMu011]
gi|308213724|gb|EFO73123.1| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis SUMu001]
gi|308328891|gb|EFP17742.1| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis SUMu003]
gi|308332729|gb|EFP21580.1| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis SUMu004]
gi|308343544|gb|EFP32395.1| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis SUMu006]
gi|308348011|gb|EFP36862.1| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis SUMu007]
gi|308351952|gb|EFP40803.1| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis SUMu008]
gi|308352738|gb|EFP41589.1| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis SUMu009]
gi|308356587|gb|EFP45438.1| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis SUMu010]
gi|308360544|gb|EFP49395.1| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis SUMu011]
Length = 827
Score = 759 bits (1960), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/649 (58%), Positives = 503/649 (77%), Gaps = 15/649 (2%)
Query: 24 TLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGL 83
L+++G NLT A EGKLDPV+GR+ +IERV+Q+L RRTKNNP LIGEPGVGKTA+ EGL
Sbjct: 149 VLDQFGRNLTAAAMEGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGL 208
Query: 84 AQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEV 143
AQ I G+VP+T++ K++ TLD+G LVAG++YRG+FEERLKK+++EI +IILFIDE+
Sbjct: 209 AQAIVHGEVPETLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDEL 268
Query: 144 HTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPE 203
HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEYRK+IEKD ALERRFQPV+V E
Sbjct: 269 HTLVGAGAAEGAIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGE 328
Query: 204 PSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSR 263
P+V+ TI+ILKGLR+RYE HH++ TD A+V+AA L+ +YI+DRFLPDKAIDLIDEAG+R
Sbjct: 329 PTVEHTIEILKGLRDRYEAHHRVSITDAAMVAAATLADRYINDRFLPDKAIDLIDEAGAR 388
Query: 264 VRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGK 323
+R+R P + RE ++++ + +EK A+ QDFEKA LRDRE L AQ +
Sbjct: 389 MRIRRMTAPPDLREFDEKIAEARREKESAIDAQDFEKAASLRDREKTLVAQ--------R 440
Query: 324 EMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIG 380
+ + +GD+ VV EVD I ++ WTGIPV K++ E+ RLL+MEE LHKR+IG
Sbjct: 441 AEREKQWRSGDL-DVVAEVDDEQIAEVLGNWTGIPVFKLTEAETTRLLRMEEELHKRIIG 499
Query: 381 QDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRL 440
Q++AVKA+S+AIRR R GLK+P RP SFIF+GP+GVGK+EL+KALA + FG ++A+I++
Sbjct: 500 QEDAVKAVSKAIRRTRAGLKDPKRPSGSFIFAGPSGVGKTELSKALANFLFGDDDALIQI 559
Query: 441 DMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQ 500
DM EF +R T S+L G+PPGYVGY EGGQLTE VRR+P++VVLFDEIEKAH +++N +LQ
Sbjct: 560 DMGEFHDRFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNSLLQ 619
Query: 501 ILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLV 560
+LEDGRLTD +GRTVDFKNT+LI TSN+G+S I K +G ++ Y R+K V
Sbjct: 620 VLEDGRLTDGQGRTVDFKNTVLIFTSNLGTSDISK---PVGLGFSKGGGENDYERMKQKV 676
Query: 561 TEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRE 620
+ELK++FRPEFLNR+D++IVF QLT+ E+ + D+M+ V +LK+KD+ L +T+ +
Sbjct: 677 NDELKKHFRPEFLNRIDDIIVFHQLTREEIIRMVDLMISRVAGQLKSKDMALVLTDAAKA 736
Query: 621 RVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDS 669
+ + G++P GARPLRR I R +ED ++EK+L E+ G V VDVD+
Sbjct: 737 LLAKRGFDPVLGARPLRRTIQREIEDQLSEKILFEEVGPGQVVTVDVDN 785
>gi|257791981|ref|YP_003182587.1| ATPase AAA-2 domain-containing protein [Eggerthella lenta DSM 2243]
gi|317489990|ref|ZP_07948482.1| ATPase [Eggerthella sp. 1_3_56FAA]
gi|325829962|ref|ZP_08163420.1| negative regulator of genetic competence ClpC/MecB [Eggerthella sp.
HGA1]
gi|257475878|gb|ACV56198.1| ATPase AAA-2 domain protein [Eggerthella lenta DSM 2243]
gi|316910988|gb|EFV32605.1| ATPase [Eggerthella sp. 1_3_56FAA]
gi|325488129|gb|EGC90566.1| negative regulator of genetic competence ClpC/MecB [Eggerthella sp.
HGA1]
Length = 854
Score = 759 bits (1960), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/684 (55%), Positives = 516/684 (75%), Gaps = 11/684 (1%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
+VG+S G + L+E+GT+LT+ A +GKLDPV+GR +IERV+Q+L R
Sbjct: 143 LVGQSPVYAGRNPFDPNGNTSDSVLKEFGTDLTQKARDGKLDPVIGRAGEIERVMQVLSR 202
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
R KNNP LIGEPGVGKTA+AEGLAQ I S VPD + GK++ TLD+ LVAG+KYRGEFE
Sbjct: 203 RQKNNPLLIGEPGVGKTAVAEGLAQLIVSNQVPDILRGKRLFTLDVSALVAGSKYRGEFE 262
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
ERLKK ++E+ + +IILFIDE+HTLIGAG+AEG+IDAA ILKP L+RGE+Q IGATT+D
Sbjct: 263 ERLKKCIKEVMDAGDIILFIDEMHTLIGAGSAEGSIDAAAILKPPLSRGEIQVIGATTID 322
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRKH+EKD ALERRFQP+ V EP+ ++ ++I++GLR+RYE HH++ +TDEAL +A LS
Sbjct: 323 EYRKHLEKDSALERRFQPITVGEPNEEQAMRIMEGLRDRYEAHHQVHFTDEALQAAVNLS 382
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
+YI DRFLPDKAID++DEAG+R+R+R+ LP+E REL+ ELR I EK+ A+ QDFE+
Sbjct: 383 NRYIQDRFLPDKAIDVLDEAGARMRIRNMTLPKELRELDDELRTIRGEKDSAIASQDFER 442
Query: 301 AGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVS 360
A +LRD+E +LKA+ + + K E +A VT DI +VS TG+PV ++
Sbjct: 443 AAQLRDQESELKAK------RIEAEKKWEEDAQKSVHQVTVEDIADVVSMTTGVPVSNLT 496
Query: 361 TDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 420
E+++LL+ME LH+RV+GQ+EAV A+S+AIRR+R GLK+P RP SFIF GP+GVGK+
Sbjct: 497 EAETEKLLRMEAVLHERVVGQEEAVTALSKAIRRSRSGLKDPKRPAGSFIFLGPSGVGKT 556
Query: 421 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 480
EL+KALA + F SE+A++ DMSE+ME+H+VS+L+GSPPGYVG+ EGGQLT+AVR+RPY+
Sbjct: 557 ELSKALAEFLFNSEDALLSFDMSEYMEKHSVSRLVGSPPGYVGFDEGGQLTKAVRQRPYS 616
Query: 481 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI 540
VVLFDEIEKAHPDVFN++LQILE+GRLTD++GRTVDF+N ++IMTSNVG+ I + +
Sbjct: 617 VVLFDEIEKAHPDVFNILLQILEEGRLTDAQGRTVDFRNAVIIMTSNVGAREIAQ-PTTL 675
Query: 541 GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 600
GF + + S IKS V E+K+ FRPEFLNR+DE+IVF+ L ++ EI +M+ +
Sbjct: 676 GFSTE-EHAGLSDKEIKSRVMAEMKKLFRPEFLNRIDEIIVFKSLNDEQISEIVKLMVAD 734
Query: 601 VFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEG 660
+ +R+ +++ + +TE + + +EG + ++GARPLRRAI RLLED ++E++L G
Sbjct: 735 LRERMIEQNMSINLTEAACKLIAKEGTDATFGARPLRRAIQRLLEDPLSEQILEGTWTSG 794
Query: 661 DSVIVDVDS-DGNVTVLNGSSGAP 683
++DVD+ DG + GS P
Sbjct: 795 S--VIDVDAVDGELVFTAGSGSIP 816
>gi|320159863|ref|YP_004173087.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Anaerolinea
thermophila UNI-1]
gi|319993716|dbj|BAJ62487.1| putative ATP-dependent Clp protease ATP-binding subunit ClpC
[Anaerolinea thermophila UNI-1]
Length = 839
Score = 759 bits (1959), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/667 (56%), Positives = 503/667 (75%), Gaps = 14/667 (2%)
Query: 21 KMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIA 80
K P +++ +LT AEEGKLDPV+GRQ +IERV+QIL RR+KNNP LIGEPGVGKTAI
Sbjct: 175 KTPLVDQLAVDLTAKAEEGKLDPVIGRQMEIERVIQILARRSKNNPALIGEPGVGKTAIV 234
Query: 81 EGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFI 140
EGLAQRI GDVP + GK+V+ LD+G LVAGT YRG+FEERLK++++E+K S ILFI
Sbjct: 235 EGLAQRIVEGDVPPLLLGKRVLQLDVGSLVAGTMYRGQFEERLKRVIDELKSSG-AILFI 293
Query: 141 DEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVK 200
DEVH L+GAGAA ++DAANILKP+L+RGELQ IGATTLDEYRKHIE D ALERRFQP+
Sbjct: 294 DEVHMLVGAGAAGSSVDAANILKPALSRGELQVIGATTLDEYRKHIESDAALERRFQPII 353
Query: 201 VPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEA 260
V EPS++ETI+ILKG++ YE HH+L TDEAL +AA+LS +Y++DRFLPDKAIDL+DEA
Sbjct: 354 VNEPSIEETIEILKGIKTAYEEHHRLTITDEALEAAAKLSARYVTDRFLPDKAIDLVDEA 413
Query: 261 GSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVD 320
SRVR+ + ARE+ K+LR++ + AV + A E +RE +L+ Q+ L
Sbjct: 414 ASRVRMYKSSAAATAREIMKKLREVRQNHALAVEDGRMDDAQEFLEREAELEEQLERL-R 472
Query: 321 KGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIG 380
G + + + P VT DI +VS WTG+PV +++T+ES+RLL MEE L K ++G
Sbjct: 473 TGWDRAAS--------PKVTADDIAEVVSMWTGVPVMQMATEESERLLHMEEELRKHIVG 524
Query: 381 QDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRL 440
QDEA+ AI++A+RRAR GLK+P RPI SFIF GPTGVGK+EL KALA + FGSEEA+I+L
Sbjct: 525 QDEAIDAIAKAVRRARAGLKDPRRPIGSFIFLGPTGVGKTELTKALARFMFGSEEALIQL 584
Query: 441 DMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQ 500
DMSEFMERHTVS+L+G+PPGYVGY E GQLTEA+RRRPY++V+FDEIEKAHP+ NM+LQ
Sbjct: 585 DMSEFMERHTVSRLVGAPPGYVGYEEAGQLTEAIRRRPYSIVVFDEIEKAHPEAHNMLLQ 644
Query: 501 ILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYD---EKDSSYNRIK 557
I+E+G L+D+KG VDF+N ++IMTSN+G+ +I++ +GF L D E+ +Y ++
Sbjct: 645 IMEEGHLSDAKGHKVDFRNAIIIMTSNIGADMIKRQT-SLGFPLAKDQTKEEQEAYEDMR 703
Query: 558 SLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTER 617
+ + L++ FRPEF+NRLD +IVFR L + +++I ++ L +V +RLK I L+ TE
Sbjct: 704 KKLLDSLRRVFRPEFINRLDSVIVFRALNREHIRQIVNLELNKVAERLKENGITLRATEA 763
Query: 618 FRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTVLN 677
+++ EEGY+P GARPLRR I +ED +++ +LA+E GD V+VD+D + N +L
Sbjct: 764 ALDKLAEEGYDPEMGARPLRRVIQNKVEDRLSDLVLAKEFNPGDEVLVDLDPETNDIILC 823
Query: 678 GSSGAPE 684
S +P+
Sbjct: 824 RSEESPQ 830
>gi|296166661|ref|ZP_06849087.1| ATP-dependent protease, ATPase subunit [Mycobacterium
parascrofulaceum ATCC BAA-614]
gi|295897996|gb|EFG77576.1| ATP-dependent protease, ATPase subunit [Mycobacterium
parascrofulaceum ATCC BAA-614]
Length = 844
Score = 759 bits (1959), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 379/649 (58%), Positives = 504/649 (77%), Gaps = 15/649 (2%)
Query: 24 TLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGL 83
L+++G NLT A EGKLDPV+GR+ +IERV+Q+L RRTKNNP LIGEPGVGKTA+ EGL
Sbjct: 170 VLDQFGRNLTAAAMEGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGL 229
Query: 84 AQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEV 143
AQ I G VP+T++ K++ TLD+G LVAG++YRG+FEERLKK+++EI +IILFIDE+
Sbjct: 230 AQAIVHGQVPETLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDEL 289
Query: 144 HTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPE 203
HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEYRK+IEKD ALERRFQPV+V E
Sbjct: 290 HTLVGAGAAEGAIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGE 349
Query: 204 PSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSR 263
P+V+ TI+ILKGLR+RYE HH++ +D ALV+AA L+ +YI+DRFLPDKAIDLIDEAG+R
Sbjct: 350 PTVEHTIEILKGLRDRYEAHHRVSISDAALVAAATLADRYINDRFLPDKAIDLIDEAGAR 409
Query: 264 VRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGK 323
+R+R P + RE ++++ +EK A+ QDFEKA LRDRE L AQ +
Sbjct: 410 MRIRRMTAPPDLREFDEKIADARREKESAIDAQDFEKAASLRDREKQLVAQ--------R 461
Query: 324 EMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIG 380
+ + +GD+ VV EVD I ++ WTGIPV K++ E+ RLL+ME+ LHKR+IG
Sbjct: 462 AEREKQWRSGDL-DVVAEVDDEQIAEVLGNWTGIPVFKLTEAETTRLLRMEDELHKRIIG 520
Query: 381 QDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRL 440
Q++AVKA+S+AIRR R GLK+P RP SFIF+GP+GVGK+EL+KALA + FG ++A+I++
Sbjct: 521 QEDAVKAVSKAIRRTRAGLKDPKRPSGSFIFAGPSGVGKTELSKALANFLFGDDDALIQI 580
Query: 441 DMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQ 500
DM EF +R T S+L G+PPGYVGY EGGQLTE VRR+P++VVLFDEIEKAH +++N +LQ
Sbjct: 581 DMGEFHDRFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNSLLQ 640
Query: 501 ILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLV 560
+LEDGRLTD +GRTVDFKNT+LI TSN+G+S I K +G +++Y R+K V
Sbjct: 641 VLEDGRLTDGQGRTVDFKNTVLIFTSNLGTSDISKP---VGLGFTQGGGENNYERMKQKV 697
Query: 561 TEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRE 620
+ELK++FRPEFLNR+D++IVF QLTK E+ + D+M+ V ++LK KD+ +++T++ +
Sbjct: 698 NDELKKHFRPEFLNRIDDIIVFHQLTKDEIIRMVDLMITRVGNQLKAKDMAMELTDKAKA 757
Query: 621 RVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDS 669
+ + G++P GARPLRR I R +ED ++EK+L E+ G V VDVD+
Sbjct: 758 LLAKRGFDPVLGARPLRRTIQREIEDQLSEKILFEEVGPGQIVTVDVDN 806
>gi|294791481|ref|ZP_06756638.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Scardovia
inopinata F0304]
gi|294457952|gb|EFG26306.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Scardovia
inopinata F0304]
Length = 882
Score = 759 bits (1959), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/697 (54%), Positives = 527/697 (75%), Gaps = 22/697 (3%)
Query: 10 GAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLI 69
G+ S+ + L+++G NLT+ A EGKLDPV+GR +IERV+ IL RRTKNNP LI
Sbjct: 157 AGGITDKSAKSGSSLLDQFGRNLTEEAREGKLDPVIGRSNEIERVMVILSRRTKNNPVLI 216
Query: 70 GEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEE 129
GEPGVGKTA+ EGLAQ+I +GDVP+T++ K+V LD+G ++AG++YRG+FEERLKK+ +E
Sbjct: 217 GEPGVGKTAVVEGLAQKIVAGDVPETLKDKQVYALDLGSMIAGSRYRGDFEERLKKVFKE 276
Query: 130 IKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKD 189
IK +I+LFIDE+HT++GAG+A+GA+ A+++LKP LARGELQ IGATT DEYRK+IEKD
Sbjct: 277 IKTRGDIVLFIDEIHTIVGAGSADGAMGASDMLKPLLARGELQTIGATTTDEYRKYIEKD 336
Query: 190 PALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFL 249
ALERRFQP++V EP++ ETI+ILKGLR++YE HH + TD A+ SAA+LS +YI DR L
Sbjct: 337 AALERRFQPIQVAEPTIAETIEILKGLRKKYEDHHHVTITDAAIQSAAELSARYIQDRNL 396
Query: 250 PDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREM 309
PDKAIDLIDEAG+R+R++ P +EL+ ++ ++ +K++A+ QDFEKA LRD +
Sbjct: 397 PDKAIDLIDEAGARLRIKRLTAPSALKELDVKVAKVKADKDKAIADQDFEKAASLRDAQE 456
Query: 310 DLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLK 369
L+ + K KE S E E+ DV VV E I H++S+ TGIPV K++ ES +LL
Sbjct: 457 KLEQE-----RKDKEKSWREGES-DVSMVVDEDTIAHVISSATGIPVFKLTETESKKLLN 510
Query: 370 MEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAY 429
ME LHKRVIGQDEAV+A+SR+IRRARVGLK+P RP SFIF+GPTGVGK+ELAKALA Y
Sbjct: 511 MEAELHKRVIGQDEAVEALSRSIRRARVGLKDPKRPSGSFIFAGPTGVGKTELAKALAEY 570
Query: 430 YFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEK 489
F E+A+IR+DMSEF E+++ S+L G+PPGYVGY EGG+LTE VRR+P++V+LFDEIEK
Sbjct: 571 LFDDEDALIRVDMSEFGEKYSTSRLFGAPPGYVGYEEGGELTEKVRRKPFSVILFDEIEK 630
Query: 490 AHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEK 549
AHPD+FN +LQ+L+DG LTD +GR VDFKNT++IMT+N+G++ I + + GF+L +
Sbjct: 631 AHPDIFNTLLQVLDDGHLTDGQGRKVDFKNTIIIMTTNLGTNKIAQ-SQSTGFNLGGN-T 688
Query: 550 DSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKD 609
++SY R+K V ELK+ FRPEFLNRLD++IVF+QLT+ +V++I ++ +K + DRL +
Sbjct: 689 ETSYQRMKDQVQSELKEQFRPEFLNRLDDIIVFKQLTESQVRQIVELDVKALNDRLFERH 748
Query: 610 IELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDS 669
+ +++T+ ++ + E+G++P GARPLRR I R +ED+++E++L +I+E + ++V+ +
Sbjct: 749 MSMELTDAAKDLLAEKGFDPLLGARPLRRVIQRDIEDAISEEILMGKIRENEQIVVNAEG 808
Query: 670 DGNVTVLNGSSGAPE--------------SLADPLPV 692
+G + SS E A+PLPV
Sbjct: 809 EGILGEFTFSSHPYEVGGPDGDGTDGDSAQAAEPLPV 845
>gi|311740167|ref|ZP_07713999.1| ATP-dependent Clp protease ATP-binding subunit ClpC
[Corynebacterium pseudogenitalium ATCC 33035]
gi|311304722|gb|EFQ80793.1| ATP-dependent Clp protease ATP-binding subunit ClpC
[Corynebacterium pseudogenitalium ATCC 33035]
Length = 918
Score = 759 bits (1959), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/673 (55%), Positives = 517/673 (76%), Gaps = 17/673 (2%)
Query: 25 LEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLA 84
L+++G NLT+ A++GKLDPVVGR+ ++ER++Q+L RRTKNNP LIGEPGVGKTA+ EGLA
Sbjct: 191 LDQFGRNLTQAAKDGKLDPVVGRESEVERIMQVLSRRTKNNPVLIGEPGVGKTAVVEGLA 250
Query: 85 QRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVH 144
I +G VP+T++ K++ +LD+G LVAG++YRG+FEERLKK+++EI Q +IILFIDE+H
Sbjct: 251 LDIVNGKVPETLKDKQLYSLDLGSLVAGSRYRGDFEERLKKVLKEINQRGDIILFIDEIH 310
Query: 145 TLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEP 204
TL+GAGAAEGAIDAA++LKP LARGELQ IGATTL+EYRKHIEKD ALERRFQPVKV EP
Sbjct: 311 TLVGAGAAEGAIDAASLLKPKLARGELQTIGATTLEEYRKHIEKDAALERRFQPVKVEEP 370
Query: 205 SVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRV 264
S+D+T ILKGLR++YE HH++ YTDEAL +AA LS +YI+DRFLPDKA+DL+DEAG+R+
Sbjct: 371 SLDDTFLILKGLRDKYEAHHRVSYTDEALHAAASLSDRYINDRFLPDKAVDLLDEAGARM 430
Query: 265 RLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKE 324
R++ P+ RE++ + ++ KEK A+ QDFEKA LRD+E L G+E
Sbjct: 431 RIKRMTAPKGLREVDDRIAEVRKEKEAAIDAQDFEKAAGLRDKERKL----------GEE 480
Query: 325 MSKAETE--AGDVGPV--VTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIG 380
++ E + +GD+ + V E I +++ WTGIPV K++ ES+RLL MEE LHKR+IG
Sbjct: 481 RAEKEKQWRSGDLEEIAEVGEDQIAEVLAHWTGIPVLKLTEKESNRLLNMEEELHKRIIG 540
Query: 381 QDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRL 440
QDEAVK++SRAIRR R GLK+P RP SFIF+GP+GVGK+EL+K+LA + FGS++ +I++
Sbjct: 541 QDEAVKSVSRAIRRTRAGLKDPRRPSGSFIFAGPSGVGKTELSKSLANFLFGSDDDLIQI 600
Query: 441 DMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQ 500
DM EF +R T S+L G+PPGYVGY EGGQLTE VRR+P++VVLFDEIEKAH +++N +LQ
Sbjct: 601 DMGEFHDRFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHKEIYNTLLQ 660
Query: 501 ILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFD-LDYDEKDSSYNRIKSL 559
+LEDGRLTD +GR VDFKNT+LI TSN+G+ I K +GF ++ D+ Y+R+K
Sbjct: 661 VLEDGRLTDGQGRVVDFKNTVLIFTSNLGTQDISK-PVGLGFTGSSENDADAQYDRMKQK 719
Query: 560 VTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFR 619
V +ELK++FRPEFLNR+D+++VF QLT+ ++ E+ ++++ V +L +D+ +++T++ +
Sbjct: 720 VNDELKKHFRPEFLNRIDDIVVFHQLTQEQIVEMVELLIGRVAKQLDERDMGIELTQKAK 779
Query: 620 ERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDS-DGNVTVLNG 678
+ + + G++P GARPLRR I R +ED ++EK+L EI G+ + VDV+ DG G
Sbjct: 780 DLLAKRGFDPVLGARPLRRTIQREIEDQLSEKILFGEIGAGEIITVDVEGWDGESKDNTG 839
Query: 679 SSGAPESLADPLP 691
+ PLP
Sbjct: 840 AKFTFSPRPKPLP 852
>gi|225018460|ref|ZP_03707652.1| hypothetical protein CLOSTMETH_02407 [Clostridium methylpentosum
DSM 5476]
gi|224948769|gb|EEG29978.1| hypothetical protein CLOSTMETH_02407 [Clostridium methylpentosum
DSM 5476]
Length = 813
Score = 759 bits (1959), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/669 (56%), Positives = 505/669 (75%), Gaps = 20/669 (2%)
Query: 2 VGES-TEAVGAGVGGG----SSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQ 56
+G S TE + GGG G P L++YG +LT+LA G++DPV+GRQ +IERV+Q
Sbjct: 144 IGSSLTEGMQDPYGGGREKRKKGENGP-LDKYGHDLTQLARLGEIDPVIGRQKEIERVIQ 202
Query: 57 ILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYR 116
IL RRTKNNPCLIGEPGVGKTAIAEGLAQ+I SG+VP+ ++ K++++LD+ ++AG KYR
Sbjct: 203 ILSRRTKNNPCLIGEPGVGKTAIAEGLAQKIVSGEVPEILKDKRIVSLDLTSMLAGAKYR 262
Query: 117 GEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGA 176
G+FEER+K ++E+ +S ++ILFIDE+HT++GAGAAEGA+DAA+ILKP LARGE+Q IGA
Sbjct: 263 GDFEERIKGTLDEVAKSKQVILFIDELHTIVGAGAAEGAVDAASILKPQLARGEIQMIGA 322
Query: 177 TTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSA 236
TT+DEY KHIEKD ALERRFQPV + EP+ + QIL GLR++YE HHK+R TDEA+ +A
Sbjct: 323 TTVDEYHKHIEKDAALERRFQPVLIEEPTPQDAEQILLGLRDKYEAHHKIRITDEAIRTA 382
Query: 237 AQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQ 296
QLS +YI+DRFLPDKAIDL+DEA SRVRL+ P RELE +++++ E A+ Q
Sbjct: 383 IQLSTRYITDRFLPDKAIDLVDEAASRVRLKAFTAPNGVRELEDKIKKLKDELCSAINAQ 442
Query: 297 DFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPV 356
DFE A LRDRE L+ Q+ A +K + K G V P +I IV++WTGIPV
Sbjct: 443 DFESAALLRDREKSLREQLEA--EKSRWQEKTARNTGQVTP----DEIAEIVASWTGIPV 496
Query: 357 EKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTG 416
++++ ES+RLL +E LHKRVIGQDEAV AIS+AIRR RVGLK+P RPI SF+F GPTG
Sbjct: 497 KQLTQTESERLLNLESILHKRVIGQDEAVTAISKAIRRGRVGLKDPKRPIGSFLFLGPTG 556
Query: 417 VGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRR 476
VGK+EL K LA FG E +MIRLDMSE+ME+H+VS+++GSPPGYVGY EGGQLTE +RR
Sbjct: 557 VGKTELCKTLAEALFGDESSMIRLDMSEYMEKHSVSRMVGSPPGYVGYEEGGQLTEKIRR 616
Query: 477 RPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKG 536
+PY VVLFDEIEKAHPDVFNM+LQILEDG LTD++GR VDF+NT+LIMTSN+G+ +I +
Sbjct: 617 KPYAVVLFDEIEKAHPDVFNMLLQILEDGILTDAQGRRVDFRNTVLIMTSNIGARLITE- 675
Query: 537 GRRIGF--DLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIA 594
+ +GF +D E+D +K+ V EL++ FRPEFLNR+D++IVF +L +++IA
Sbjct: 676 RKNLGFVGAVDDAERD-----VKADVIAELRRSFRPEFLNRVDDIIVFHKLNSENIEQIA 730
Query: 595 DIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLA 654
ML DR++ +++ + + + + G++P YGARPLRRAI +ED ++E+ML
Sbjct: 731 FHMLAAFADRVQKLGVDITYDRQPVKEIAKIGFDPLYGARPLRRAITSNIEDLLSERMLE 790
Query: 655 REIKEGDSV 663
++K GD +
Sbjct: 791 GKVKAGDQI 799
>gi|227876310|ref|ZP_03994423.1| ATPase with chaperone activity, ATP-binding subunit [Mobiluncus
mulieris ATCC 35243]
gi|269976114|ref|ZP_06183113.1| negative regulator of genetic competence ClpC/MecB [Mobiluncus
mulieris 28-1]
gi|307701521|ref|ZP_07638539.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Mobiluncus
mulieris FB024-16]
gi|227843083|gb|EEJ53279.1| ATPase with chaperone activity, ATP-binding subunit [Mobiluncus
mulieris ATCC 35243]
gi|269935707|gb|EEZ92242.1| negative regulator of genetic competence ClpC/MecB [Mobiluncus
mulieris 28-1]
gi|307613313|gb|EFN92564.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Mobiluncus
mulieris FB024-16]
Length = 915
Score = 758 bits (1958), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/661 (58%), Positives = 511/661 (77%), Gaps = 12/661 (1%)
Query: 12 GVGGGSS----GNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPC 67
GVGGG + G L+++G NLT+ A+E KLDPV+GR ++ERV+QIL RRTKNNP
Sbjct: 159 GVGGGRADNPRGGNSALLDQFGRNLTQAAQENKLDPVIGRTKEMERVMQILSRRTKNNPV 218
Query: 68 LIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLM 127
L+GEPGVGKTA+ EGLAQ I GDVP+T++ K++ +LDMG LVAG++YRG+FEERLKK++
Sbjct: 219 LVGEPGVGKTAVVEGLAQSIVRGDVPETLKDKQLYSLDMGSLVAGSRYRGDFEERLKKVL 278
Query: 128 EEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIE 187
+EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTL+EYRK+IE
Sbjct: 279 KEIRTRGDIILFIDEIHTLVGAGAAEGAIDAASILKPILARGELQTIGATTLEEYRKYIE 338
Query: 188 KDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDR 247
KD ALERRFQPV+V EPSV+ET+ ILKGLR+RYE HH++ TD A+ SAAQL+ +YISDR
Sbjct: 339 KDSALERRFQPVRVEEPSVEETVAILKGLRDRYESHHRVMITDAAVASAAQLADRYISDR 398
Query: 248 FLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDR 307
FLPDKAIDLIDEAG+R+R++ P E +E+++++ + + K A+ QDFEKA LRD
Sbjct: 399 FLPDKAIDLIDEAGARLRIQRMTAPPELKEVDEKIAKTRRAKEAAIDAQDFEKAASLRDE 458
Query: 308 EMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRL 367
E L ++ + +K ++ E + VV I +++ TGIPV K++ ES +L
Sbjct: 459 EKKLASERA---EKEEQWRSGEDK---TKLVVDAEQIAEVLAMATGIPVFKLTQAESSKL 512
Query: 368 LKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALA 427
L+ME+ LHKR+IGQ+EAVKA+S++IRR R GLK+P RP SFIF+GPTGVGK+ELAKALA
Sbjct: 513 LRMEDELHKRIIGQNEAVKAVSQSIRRTRAGLKDPKRPGGSFIFAGPTGVGKTELAKALA 572
Query: 428 AYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEI 487
+ FG E A+I+LDMSEF E+HT S+L GSPPGYVGY EGGQLTE VRR+P++VVLFDE+
Sbjct: 573 EFLFGDENALIQLDMSEFSEKHTASRLFGSPPGYVGYDEGGQLTEKVRRKPFSVVLFDEV 632
Query: 488 EKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYD 547
EKAHPD+FN +LQ+LE+G LTDS+GR VDFKNT++IMT+N+G+ I K G GF
Sbjct: 633 EKAHPDIFNSLLQVLEEGHLTDSQGRLVDFKNTIIIMTTNLGTRDINK-GVLTGFQAS-G 690
Query: 548 EKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKT 607
E + Y R+K V EELKQ+FRPEFLNR+DE++VF QL K E+ +I D+M+K++ DR+
Sbjct: 691 ELATDYQRMKGKVQEELKQHFRPEFLNRVDEVVVFPQLQKEEILKIVDLMIKKLDDRMLE 750
Query: 608 KDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDV 667
+ + +++T R + +G++ + GARPLRRA+ R +ED ++EK+L E+ EG +V+ DV
Sbjct: 751 QGMAIKLTPEARALLAYKGFDKTLGARPLRRAVQREIEDVLSEKILFNELHEGQTVLADV 810
Query: 668 D 668
D
Sbjct: 811 D 811
>gi|392418483|ref|YP_006455088.1| ATPase with chaperone activity, ATP-binding subunit [Mycobacterium
chubuense NBB4]
gi|390618259|gb|AFM19409.1| ATPase with chaperone activity, ATP-binding subunit [Mycobacterium
chubuense NBB4]
Length = 847
Score = 758 bits (1958), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 376/648 (58%), Positives = 505/648 (77%), Gaps = 15/648 (2%)
Query: 25 LEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLA 84
L+++G NLT A EGKLDPV+GR+ +IERV+Q+L RRTKNNP LIGEPGVGKTA+ EGLA
Sbjct: 171 LDQFGRNLTAAAMEGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLA 230
Query: 85 QRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVH 144
Q I GDVP+T++ K++ TLD+G LVAG++YRG+FEERLKK+++EI +IILFIDE+H
Sbjct: 231 QAIVHGDVPETLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDELH 290
Query: 145 TLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEP 204
TL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEYRK+IEKD ALERRFQPV+V EP
Sbjct: 291 TLVGAGAAEGAIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEP 350
Query: 205 SVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRV 264
+V TI+ILKGLR+RYE HH++ TD A+ +AA L+ +YI+DRFLPDKAIDLIDEAG+R+
Sbjct: 351 TVAHTIEILKGLRDRYEAHHRVSITDGAIAAAATLADRYINDRFLPDKAIDLIDEAGARM 410
Query: 265 RLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKE 324
R+R P + RE ++++ +EK A+ QDFEKA LRD+E L AQ +
Sbjct: 411 RIRRMTAPPDLREFDEKIADARREKESAIDAQDFEKAASLRDKEKQLVAQ--------RA 462
Query: 325 MSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQ 381
+ + +GD+ VV EVD I ++ WTGIPV K++ +E+ RLL+ME+ LHKR+IGQ
Sbjct: 463 EREKQWRSGDL-DVVAEVDDEQIAEVLGNWTGIPVFKLTEEETTRLLRMEDELHKRIIGQ 521
Query: 382 DEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLD 441
++AVKA+S+AIRR R GLK+P RP SFIF+GP+GVGK+EL+KALA + FG ++A+I++D
Sbjct: 522 EDAVKAVSKAIRRTRAGLKDPKRPSGSFIFAGPSGVGKTELSKALANFLFGDDDALIQID 581
Query: 442 MSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQI 501
M EF +R T S+L G+PPGYVGY EGGQLTE VRR+P++VVLFDEIEKAH +++N +LQ+
Sbjct: 582 MGEFHDRFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNSLLQV 641
Query: 502 LEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVT 561
LEDGRLTD +GRTVDFKNT+LI TSN+G+S I K +G +++Y R+K V
Sbjct: 642 LEDGRLTDGQGRTVDFKNTVLIFTSNLGTSDISKA---VGLGFTQGGGENNYERMKQKVN 698
Query: 562 EELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRER 621
+ELK++FRPEFLNR+D++IVF QLT+ E+ ++ D+M+ V ++L+ KD+ +++T+R +
Sbjct: 699 DELKKHFRPEFLNRIDDIIVFHQLTQDEIIKMVDLMIGRVGNQLRAKDMTMELTDRAKAL 758
Query: 622 VVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDS 669
+ + G++P GARPLRR I R +ED ++EK+L E+ G V VDV++
Sbjct: 759 LAKRGFDPVLGARPLRRTIQREIEDQLSEKILFEEVGPGQLVTVDVEN 806
>gi|220930935|ref|YP_002507843.1| ATPase AAA-2 domain-containing protein [Halothermothrix orenii H
168]
gi|219992245|gb|ACL68848.1| ATPase AAA-2 domain protein [Halothermothrix orenii H 168]
Length = 806
Score = 758 bits (1958), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 398/660 (60%), Positives = 515/660 (78%), Gaps = 9/660 (1%)
Query: 16 GSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVG 75
G+ ++ P L+EY +LTKLA++ KLDPV+GR+ +IERV+Q+L RRTKNNP LIGEPGVG
Sbjct: 154 GTRRSETPNLDEYSRDLTKLADQVKLDPVIGREKEIERVIQVLSRRTKNNPVLIGEPGVG 213
Query: 76 KTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDE 135
KTAI EGLAQRI VPD + K+V+ LD+ +VAG+KYRGEFE+RLK +M +I +S
Sbjct: 214 KTAIVEGLAQRIVDESVPDVLLNKRVVALDLSSIVAGSKYRGEFEKRLKAVMNDIVKSGN 273
Query: 136 IILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERR 195
IILFIDE+HTL+GAGAAEGAIDAANILKP+LARGELQ IGATTLDEYRK+IEKDPALERR
Sbjct: 274 IILFIDELHTLVGAGAAEGAIDAANILKPALARGELQAIGATTLDEYRKYIEKDPALERR 333
Query: 196 FQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAID 255
FQ + V EP+ +ETI+ILKGLR+ YE HHK++ +DEA+ +A LS++YI+DRFLPDKAID
Sbjct: 334 FQSILVEEPTPEETIEILKGLRDPYEAHHKVKISDEAIKAAVNLSHRYITDRFLPDKAID 393
Query: 256 LIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQI 315
LIDEA SRVRL P E ++L K+L ++ KEK AV+ Q+FEKA ELRD+E +L+ +
Sbjct: 394 LIDEAASRVRLGSDTRPPELKDLNKKLEEVKKEKEAAVKNQEFEKAAELRDKEKELEKEF 453
Query: 316 SALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLH 375
+ K E E VT +I IVS+WTGIPV K+ E+ +LL +EE LH
Sbjct: 454 ENI------QEKWEKEKEKSESTVTTEEIAEIVSSWTGIPVTKLEQAETAKLLHLEEELH 507
Query: 376 KRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEE 435
KRV+GQDEA++A+S+A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+ALA F EE
Sbjct: 508 KRVVGQDEAIQAVSQAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAEAMFNDEE 567
Query: 436 AMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVF 495
M+R+DMSE+ME+H VS+L+GSPPGYVG+ EGGQLTE +RRRPY+VVLFDEIEKAHPDVF
Sbjct: 568 TMVRIDMSEYMEKHAVSRLVGSPPGYVGHEEGGQLTEPIRRRPYSVVLFDEIEKAHPDVF 627
Query: 496 NMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNR 555
N++LQILEDG LTD+ GR VDFKNT++IMTSNVG++ IEK R+GF DEK +Y
Sbjct: 628 NILLQILEDGHLTDTHGRRVDFKNTVVIMTSNVGANFIEKQS-RLGFKAGNDEK-QNYED 685
Query: 556 IKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVT 615
+K + +L++ FRPEFLNR+DE+IVF L + +K+I D+ML +V RL+ K+I+++VT
Sbjct: 686 MKDKLMSDLRRTFRPEFLNRVDEIIVFHALNRDHIKQIVDLMLDDVKKRLEDKEIDIEVT 745
Query: 616 ERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTV 675
E + + E+G++ +GARPLRR I R++E+ ++EK+L ++KEGD V+VD + DG V V
Sbjct: 746 EGAKHVLAEKGFDSEFGARPLRRTIQRMVENPLSEKILEGKVKEGDKVVVD-EQDGKVVV 804
>gi|31794773|ref|NP_857266.1| ATP-dependent Clp protease ATP-binding subunit CLPC [Mycobacterium
bovis AF2122/97]
gi|57117131|ref|YP_177995.1| Probable ATP-dependent protease ATP-binding subunit ClpC1
[Mycobacterium tuberculosis H37Rv]
gi|121639516|ref|YP_979740.1| ATP-dependent Clp protease ATP-binding subunit clpC [Mycobacterium
bovis BCG str. Pasteur 1173P2]
gi|148663461|ref|YP_001284984.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Mycobacterium
tuberculosis H37Ra]
gi|148824802|ref|YP_001289556.1| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis F11]
gi|167968197|ref|ZP_02550474.1| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis H37Ra]
gi|224992013|ref|YP_002646702.1| ATP-dependent Clp protease ATP-binding subunit [Mycobacterium bovis
BCG str. Tokyo 172]
gi|253800637|ref|YP_003033638.1| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis KZN 1435]
gi|289445190|ref|ZP_06434934.1| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis CPHL_A]
gi|289747433|ref|ZP_06506811.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium
tuberculosis 02_1987]
gi|294993716|ref|ZP_06799407.1| probable ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium tuberculosis 210]
gi|297636272|ref|ZP_06954052.1| probable ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium tuberculosis KZN 4207]
gi|297733266|ref|ZP_06962384.1| probable ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium tuberculosis KZN R506]
gi|306791193|ref|ZP_07429495.1| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis SUMu005]
gi|307086394|ref|ZP_07495507.1| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis SUMu012]
gi|313660596|ref|ZP_07817476.1| probable ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium tuberculosis KZN V2475]
gi|340628561|ref|YP_004747013.1| putative ATP-dependent protease ATP-binding subunit CLPC1
[Mycobacterium canettii CIPT 140010059]
gi|375297863|ref|YP_005102130.1| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis KZN 4207]
gi|378773377|ref|YP_005173110.1| putative ATP-dependent Clp protease, ATP-binding subunit
[Mycobacterium bovis BCG str. Mexico]
gi|383309326|ref|YP_005362137.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium tuberculosis RGTB327]
gi|385992823|ref|YP_005911121.1| ATP-dependent Clp protease ATP-binding subunit CLPC [Mycobacterium
tuberculosis CCDC5180]
gi|385996461|ref|YP_005914759.1| ATP-dependent Clp protease ATP-binding subunit CLPC [Mycobacterium
tuberculosis CCDC5079]
gi|386000382|ref|YP_005918681.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium
tuberculosis CTRI-2]
gi|392388189|ref|YP_005309818.1| clpC1 [Mycobacterium tuberculosis UT205]
gi|392434075|ref|YP_006475119.1| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis KZN 605]
gi|397675551|ref|YP_006517086.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Mycobacterium
tuberculosis H37Rv]
gi|422814849|ref|ZP_16863067.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium
tuberculosis CDC1551A]
gi|424806159|ref|ZP_18231590.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium
tuberculosis W-148]
gi|424945484|ref|ZP_18361180.1| ATP-dependent protease ATP-binding subunit [Mycobacterium
tuberculosis NCGM2209]
gi|433628738|ref|YP_007262367.1| Putative ATP-dependent Clp protease ATP-binding subunit ClpC1
[Mycobacterium canettii CIPT 140060008]
gi|433632691|ref|YP_007266319.1| Putative ATP-dependent Clp protease ATP-binding subunit ClpC1
[Mycobacterium canettii CIPT 140070010]
gi|433636704|ref|YP_007270331.1| Putative ATP-dependent Clp protease ATP-binding subunit ClpC1
[Mycobacterium canettii CIPT 140070017]
gi|433643788|ref|YP_007289547.1| Putative ATP-dependent Clp protease ATP-binding subunit ClpC1
[Mycobacterium canettii CIPT 140070008]
gi|449065710|ref|YP_007432793.1| ATP-dependent Clp protease ATP-binding subunit CLPC [Mycobacterium
bovis BCG str. Korea 1168P]
gi|61221148|sp|P0A522.1|CLPC_MYCTU RecName: Full=Probable ATP-dependent Clp protease ATP-binding
subunit
gi|61221149|sp|P0A523.1|CLPC_MYCBO RecName: Full=Probable ATP-dependent Clp protease ATP-binding
subunit
gi|31620370|emb|CAD95813.1| PROBABLE ATP-DEPENDENT CLP PROTEASE ATP-BINDING SUBUNIT CLPC
[Mycobacterium bovis AF2122/97]
gi|121495164|emb|CAL73650.1| Probable ATP-dependent clp proteasE ATP-binding subunit clpC
[Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|148507613|gb|ABQ75422.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Mycobacterium
tuberculosis H37Ra]
gi|148723329|gb|ABR07954.1| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis F11]
gi|224775128|dbj|BAH27934.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium bovis BCG str. Tokyo 172]
gi|253322140|gb|ACT26743.1| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis KZN 1435]
gi|289418148|gb|EFD15349.1| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis CPHL_A]
gi|289687961|gb|EFD55449.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium
tuberculosis 02_1987]
gi|308340222|gb|EFP29073.1| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis SUMu005]
gi|308364160|gb|EFP53011.1| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis SUMu012]
gi|323717705|gb|EGB26905.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium
tuberculosis CDC1551A]
gi|326905435|gb|EGE52368.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium
tuberculosis W-148]
gi|328460368|gb|AEB05791.1| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis KZN 4207]
gi|339296415|gb|AEJ48526.1| ATP-dependent Clp protease ATP-binding subunit CLPC [Mycobacterium
tuberculosis CCDC5079]
gi|339300016|gb|AEJ52126.1| ATP-dependent Clp protease ATP-binding subunit CLPC [Mycobacterium
tuberculosis CCDC5180]
gi|340006751|emb|CCC45939.1| putative ATP-dependent protease ATP-binding subunit CLPC1
[Mycobacterium canettii CIPT 140010059]
gi|341603537|emb|CCC66218.1| probable ATP-dependent clp proteasE ATP-binding subunit clpC
[Mycobacterium bovis BCG str. Moreau RDJ]
gi|344221429|gb|AEN02060.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium
tuberculosis CTRI-2]
gi|356595698|gb|AET20927.1| Putative ATP-dependent Clp protease, ATP-binding subunit
[Mycobacterium bovis BCG str. Mexico]
gi|358229999|dbj|GAA43491.1| ATP-dependent protease ATP-binding subunit [Mycobacterium
tuberculosis NCGM2209]
gi|378546740|emb|CCE39019.1| clpC1 [Mycobacterium tuberculosis UT205]
gi|379029983|dbj|BAL67716.1| ATP-dependent protease ATP-binding subunit [Mycobacterium
tuberculosis str. Erdman = ATCC 35801]
gi|380723279|gb|AFE18388.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium tuberculosis RGTB327]
gi|392055484|gb|AFM51042.1| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis KZN 605]
gi|395140456|gb|AFN51615.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Mycobacterium
tuberculosis H37Rv]
gi|432156344|emb|CCK53602.1| Putative ATP-dependent Clp protease ATP-binding subunit ClpC1
[Mycobacterium canettii CIPT 140060008]
gi|432160336|emb|CCK57659.1| Putative ATP-dependent Clp protease ATP-binding subunit ClpC1
[Mycobacterium canettii CIPT 140070008]
gi|432164284|emb|CCK61736.1| Putative ATP-dependent Clp protease ATP-binding subunit ClpC1
[Mycobacterium canettii CIPT 140070010]
gi|432168297|emb|CCK65831.1| Putative ATP-dependent Clp protease ATP-binding subunit ClpC1
[Mycobacterium canettii CIPT 140070017]
gi|440583104|emb|CCG13507.1| putative ATP-DEPENDENT PROTEASE ATP-BINDING SUBUNIT CLPC1
[Mycobacterium tuberculosis 7199-99]
gi|444897153|emb|CCP46419.1| Probable ATP-dependent protease ATP-binding subunit ClpC1
[Mycobacterium tuberculosis H37Rv]
gi|449034218|gb|AGE69645.1| ATP-dependent Clp protease ATP-binding subunit CLPC [Mycobacterium
bovis BCG str. Korea 1168P]
Length = 848
Score = 758 bits (1958), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/649 (58%), Positives = 503/649 (77%), Gaps = 15/649 (2%)
Query: 24 TLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGL 83
L+++G NLT A EGKLDPV+GR+ +IERV+Q+L RRTKNNP LIGEPGVGKTA+ EGL
Sbjct: 170 VLDQFGRNLTAAAMEGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGL 229
Query: 84 AQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEV 143
AQ I G+VP+T++ K++ TLD+G LVAG++YRG+FEERLKK+++EI +IILFIDE+
Sbjct: 230 AQAIVHGEVPETLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDEL 289
Query: 144 HTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPE 203
HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEYRK+IEKD ALERRFQPV+V E
Sbjct: 290 HTLVGAGAAEGAIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGE 349
Query: 204 PSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSR 263
P+V+ TI+ILKGLR+RYE HH++ TD A+V+AA L+ +YI+DRFLPDKAIDLIDEAG+R
Sbjct: 350 PTVEHTIEILKGLRDRYEAHHRVSITDAAMVAAATLADRYINDRFLPDKAIDLIDEAGAR 409
Query: 264 VRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGK 323
+R+R P + RE ++++ + +EK A+ QDFEKA LRDRE L AQ +
Sbjct: 410 MRIRRMTAPPDLREFDEKIAEARREKESAIDAQDFEKAASLRDREKTLVAQ--------R 461
Query: 324 EMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIG 380
+ + +GD+ VV EVD I ++ WTGIPV K++ E+ RLL+MEE LHKR+IG
Sbjct: 462 AEREKQWRSGDL-DVVAEVDDEQIAEVLGNWTGIPVFKLTEAETTRLLRMEEELHKRIIG 520
Query: 381 QDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRL 440
Q++AVKA+S+AIRR R GLK+P RP SFIF+GP+GVGK+EL+KALA + FG ++A+I++
Sbjct: 521 QEDAVKAVSKAIRRTRAGLKDPKRPSGSFIFAGPSGVGKTELSKALANFLFGDDDALIQI 580
Query: 441 DMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQ 500
DM EF +R T S+L G+PPGYVGY EGGQLTE VRR+P++VVLFDEIEKAH +++N +LQ
Sbjct: 581 DMGEFHDRFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNSLLQ 640
Query: 501 ILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLV 560
+LEDGRLTD +GRTVDFKNT+LI TSN+G+S I K +G ++ Y R+K V
Sbjct: 641 VLEDGRLTDGQGRTVDFKNTVLIFTSNLGTSDISKP---VGLGFSKGGGENDYERMKQKV 697
Query: 561 TEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRE 620
+ELK++FRPEFLNR+D++IVF QLT+ E+ + D+M+ V +LK+KD+ L +T+ +
Sbjct: 698 NDELKKHFRPEFLNRIDDIIVFHQLTREEIIRMVDLMISRVAGQLKSKDMALVLTDAAKA 757
Query: 621 RVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDS 669
+ + G++P GARPLRR I R +ED ++EK+L E+ G V VDVD+
Sbjct: 758 LLAKRGFDPVLGARPLRRTIQREIEDQLSEKILFEEVGPGQVVTVDVDN 806
>gi|294101565|ref|YP_003553423.1| ATPase AAA-2 domain-containing protein [Aminobacterium colombiense
DSM 12261]
gi|293616545|gb|ADE56699.1| ATPase AAA-2 domain protein [Aminobacterium colombiense DSM 12261]
Length = 830
Score = 758 bits (1958), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/660 (57%), Positives = 519/660 (78%), Gaps = 10/660 (1%)
Query: 11 AGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIG 70
+G G S +K PTL++ G +L++ + + +LDPV+GR +I+RV+QIL RRTKNNP L+G
Sbjct: 157 SGEGQRSLHSKTPTLDQLGIDLSEKSRKDELDPVIGRDKEIQRVIQILARRTKNNPVLLG 216
Query: 71 EPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEI 130
+PGVGKTAI EGLAQ+I G++ + + GKK++ L++G LVAGTKYRGEFEER++KL++E+
Sbjct: 217 DPGVGKTAIVEGLAQKIQDGNIAEILRGKKIVQLNIGNLVAGTKYRGEFEERMRKLLKEL 276
Query: 131 KQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDP 190
+++ ++I+FIDE+H++IGAG AEGA+DAANILKPSL+RGE Q IGATTLDEYRK+IEKD
Sbjct: 277 RETGDVIIFIDEIHSIIGAGGAEGAVDAANILKPSLSRGEFQVIGATTLDEYRKYIEKDA 336
Query: 191 ALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLP 250
ALERRFQPV V EPSVD+TI IL+GLR+RYE HH+++ +D+ALV+AA+LS +YI++RFLP
Sbjct: 337 ALERRFQPVMVEEPSVDDTISILEGLRDRYESHHRVKISDDALVAAARLSSRYITERFLP 396
Query: 251 DKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMD 310
DKAIDLIDEA +R RL+ ++P +++E +L ++ KEK AV Q+FEKA LRD E
Sbjct: 397 DKAIDLIDEAAARARLKTMEIPANLKDIEHDLEEVRKEKEAAVTSQEFEKAARLRDTERK 456
Query: 311 LKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKM 370
+ ++ +K K+ + P+V+ DI IVS WT IPV +++ +E+ RLL+M
Sbjct: 457 ISEELE---EKKKDWQSRRYQE---KPLVSFDDIATIVSEWTNIPVTQLTEEETQRLLRM 510
Query: 371 EETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYY 430
EE +H R+IGQ+EAV A++RAIRRAR G+K+P RP+ SF+F GPTGVGK+ELA+ LA +
Sbjct: 511 EEEIHCRLIGQEEAVSAVARAIRRARSGMKDPRRPVGSFLFLGPTGVGKTELARRLADFL 570
Query: 431 FGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKA 490
FGSE+AMIRLDMSEFMERH V KLIG+PPGYVGY EGG+LTEA+RRRPY+VVLFDEIEKA
Sbjct: 571 FGSEDAMIRLDMSEFMERHEVGKLIGAPPGYVGYDEGGKLTEAIRRRPYSVVLFDEIEKA 630
Query: 491 HPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKD 550
H DVFN++LQILEDGRLTD +G TVDF+N ++IMTSN+G+ K G +GF + E D
Sbjct: 631 HEDVFNILLQILEDGRLTDGQGHTVDFRNAVIIMTSNIGAKDWVK-GTSLGFSIS-GEAD 688
Query: 551 S--SYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTK 608
+++ KS + + +++ FRPEF+NR+DEM+VFR L+K E+ I DIML +V +RL+ +
Sbjct: 689 GYFDWDKTKSDILDAVQKTFRPEFINRVDEMVVFRPLSKKEMLVIVDIMLSDVRERLRYQ 748
Query: 609 DIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVD 668
DI+++V+E + ++E+GYNP YGARPLRR I +L+ED MA+ +L +IK+G V +D D
Sbjct: 749 DIDIKVSEEAKAFILEKGYNPRYGARPLRRKIQQLIEDRMADMLLEGKIKKGSLVSIDED 808
>gi|227540962|ref|ZP_03971011.1| ATP-dependent protease, ATPase subunit [Corynebacterium
glucuronolyticum ATCC 51866]
gi|227183222|gb|EEI64194.1| ATP-dependent protease, ATPase subunit [Corynebacterium
glucuronolyticum ATCC 51866]
Length = 870
Score = 758 bits (1958), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/683 (56%), Positives = 523/683 (76%), Gaps = 12/683 (1%)
Query: 14 GGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPG 73
G G N + TL+++G NLT+LA++GKLDPVVGR+ +IER++Q+L RRTKNNP LIGEPG
Sbjct: 178 GPGERSNSL-TLDKFGRNLTQLAKDGKLDPVVGREKEIERIMQVLSRRTKNNPVLIGEPG 236
Query: 74 VGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQS 133
VGKTA+ EGLA I +G VP+T+ K++ +LD+G LVAG++YRG+FEERLKK+++EI Q
Sbjct: 237 VGKTAVVEGLALDIVNGRVPETLRDKQLYSLDLGSLVAGSRYRGDFEERLKKVLKEINQR 296
Query: 134 DEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALE 193
+IILFIDE+HT++GAGAAEGAIDAA++LKP LARGELQ IGATTLDEYRKHIEKD ALE
Sbjct: 297 GDIILFIDEIHTIVGAGAAEGAIDAASLLKPKLARGELQTIGATTLDEYRKHIEKDAALE 356
Query: 194 RRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKA 253
RRFQPV VPEPSV++TIQILKGLR+RYE HH++ TD AL +AA LS +YI+DRFLPDKA
Sbjct: 357 RRFQPVNVPEPSVEDTIQILKGLRDRYEAHHRVSITDGALAAAASLSDRYINDRFLPDKA 416
Query: 254 IDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKA 313
+DLIDEAG+R+R++ PE RE+++ + ++ EK A+ QDFEKA LRD E L
Sbjct: 417 VDLIDEAGARMRIKRMTAPEGLREIDERIAKVRGEKEAAIDAQDFEKAAGLRDNERKLTE 476
Query: 314 QISALVDKGKEMSKAE-TEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEE 372
+ + +K K+ E E +VG E I +++ WTGIPV K++ +ES RL+ ME+
Sbjct: 477 ERA---EKEKQWRNGELQEIAEVG----EEQIAEVLANWTGIPVFKLTEEESSRLIHMED 529
Query: 373 TLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFG 432
LHKR+IGQ++AVKA+SRAIRR R GLK+PNRP SFIF+GP+GVGK+EL+KALA + FG
Sbjct: 530 ELHKRIIGQEDAVKAVSRAIRRTRAGLKDPNRPSGSFIFAGPSGVGKTELSKALAEFLFG 589
Query: 433 SEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHP 492
++++I++DM EF ++ T S+L G+PPGYVGY EGGQLTE VRR+P++VVLFDEIEKAH
Sbjct: 590 DDDSLIQIDMGEFHDKFTASRLFGAPPGYVGYDEGGQLTEKVRRKPFSVVLFDEIEKAHK 649
Query: 493 DVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYD-EKDS 551
+++N +LQ+LE+GRLTD +GR VDFKNT+LI TSN+G+ I K +GF + + + D+
Sbjct: 650 EIYNTLLQVLEEGRLTDGQGRVVDFKNTVLIFTSNLGTQDISK-AVGMGFTANNETDDDA 708
Query: 552 SYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIE 611
Y R+K VT+ELK++FRPEFLNR+DE++VF+QLT+ ++ ++ D++ V L+ KD+
Sbjct: 709 KYERMKDKVTDELKKHFRPEFLNRIDEIVVFKQLTREQIVQMVDLLTARVAKMLREKDMG 768
Query: 612 LQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDS-D 670
L++TE+ + + + G++P GARPLRR I R +ED+++EK+L E+ G+ V VDVD D
Sbjct: 769 LEITEKAKNLLAKRGFDPVLGARPLRRTIQREIEDALSEKILFGEVGAGEIVTVDVDGWD 828
Query: 671 GNVTVLNGSSGAPESLADPLPVV 693
G + ++ PLP V
Sbjct: 829 GESEDTDKATFTFTPKPKPLPGV 851
>gi|374854659|dbj|BAL57535.1| ATP-dependent Clp protease ATP-binding subunit ClpC [uncultured
candidate division OP1 bacterium]
Length = 810
Score = 758 bits (1958), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/660 (57%), Positives = 498/660 (75%), Gaps = 15/660 (2%)
Query: 27 EYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQR 86
EYG NL + A EG+LDPV+GR +I ++Q L RR KNNP ++GEPGVGKTAI EGLAQR
Sbjct: 162 EYGRNLVEEAREGRLDPVIGRDKEINSIIQTLSRRKKNNPVIVGEPGVGKTAIVEGLAQR 221
Query: 87 IASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTL 146
IASGDVP + GK++I LDM +VAGTKYRGEFE+RLK ++ + +S +ILFIDE+HT+
Sbjct: 222 IASGDVPAPLLGKEIIELDMAAIVAGTKYRGEFEQRLKAIVNAVIESGNVILFIDELHTV 281
Query: 147 IGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSV 206
+GAG AEGAIDA+ ILKP LA G +QCIG TLDEYRK+IEKD ALERRF+ + V EP +
Sbjct: 282 VGAGGAEGAIDASAILKPPLASGLIQCIGTATLDEYRKYIEKDAALERRFKKIVVEEPQI 341
Query: 207 DETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRL 266
+ T+QILKGLR RYE HH+++ TD AL +AA+LS +YI+D FLPDKAIDLIDE ++ RL
Sbjct: 342 EATVQILKGLRPRYEAHHRVKITDGALYAAAKLSDRYITDHFLPDKAIDLIDETAAKKRL 401
Query: 267 RHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMS 326
+ E RELE +LR + ++KN A+ Q++E+A +LRD E L+ ++ L +M
Sbjct: 402 ETSSFSPEIRELEDQLRALAEQKNAAISEQNYERAAQLRDAERQLQERLREL-----KME 456
Query: 327 KAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVK 386
E EA VVTE DI +VS+WTG+PV + +ES R+L MEE +HKR I QDEAVK
Sbjct: 457 FHEYEA-----VVTEDDIAQMVSSWTGVPVGHMKMEESKRVLTMEEEIHKRYIDQDEAVK 511
Query: 387 AISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFM 446
A++RAIRRA G+K+P RPI SF+F GPTGVGK+ELAKA+A + FG EEA+IR+DMSE+M
Sbjct: 512 AVARAIRRAYAGVKDPKRPIGSFLFLGPTGVGKTELAKAIAEFLFGDEEAIIRIDMSEYM 571
Query: 447 ERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGR 506
ER +VS+LIG+PPGYVGY E G+LTEAVRRRPY+VVLFDEIEKAH DVFN++LQ+++DG
Sbjct: 572 ERFSVSRLIGAPPGYVGYEEAGELTEAVRRRPYSVVLFDEIEKAHRDVFNILLQVMDDGA 631
Query: 507 LTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDS--SYNRIKSLVTEEL 564
LTDS+GR VDF+NT+LIMTSN+GS I +GF + DE DS SY ++S V E+
Sbjct: 632 LTDSQGRRVDFRNTVLIMTSNIGSKTI-TDRTALGFSVS-DEVDSKESYTEMRSRVMSEV 689
Query: 565 KQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVE 624
K++FRPEFLNRLD++IVF Q TK + +IA++ L+E+ +RL+ ++I + VTE +E +++
Sbjct: 690 KEFFRPEFLNRLDDIIVFHQHTKENIYKIAELKLRELAERLREREIFISVTEEAKELLIK 749
Query: 625 EGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNGSSGAPE 684
EGY+P YGARPL R + RL+E+ +++K+L E +GDS+I+D DG + PE
Sbjct: 750 EGYDPKYGARPLVRTLERLIENPISDKILEGEFVKGDSIIIDA-KDGQICFSKKEEKTPE 808
>gi|306817201|ref|ZP_07450948.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Mobiluncus
mulieris ATCC 35239]
gi|304650003|gb|EFM47281.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Mobiluncus
mulieris ATCC 35239]
Length = 915
Score = 758 bits (1958), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/661 (58%), Positives = 511/661 (77%), Gaps = 12/661 (1%)
Query: 12 GVGGGSS----GNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPC 67
GVGGG + G L+++G NLT+ A+E KLDPV+GR ++ERV+QIL RRTKNNP
Sbjct: 159 GVGGGRADNPRGGNSALLDQFGRNLTQAAQENKLDPVIGRTKEMERVMQILSRRTKNNPV 218
Query: 68 LIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLM 127
L+GEPGVGKTA+ EGLAQ I GDVP+T++ K++ +LDMG LVAG++YRG+FEERLKK++
Sbjct: 219 LVGEPGVGKTAVVEGLAQSIVRGDVPETLKDKQLYSLDMGSLVAGSRYRGDFEERLKKVL 278
Query: 128 EEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIE 187
+EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTL+EYRK+IE
Sbjct: 279 KEIRTRGDIILFIDEIHTLVGAGAAEGAIDAASILKPILARGELQTIGATTLEEYRKYIE 338
Query: 188 KDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDR 247
KD ALERRFQPV+V EPSV+ET+ ILKGLR+RYE HH++ TD A+ SAAQL+ +YISDR
Sbjct: 339 KDSALERRFQPVRVEEPSVEETVAILKGLRDRYESHHRVMITDAAVASAAQLADRYISDR 398
Query: 248 FLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDR 307
FLPDKAIDLIDEAG+R+R++ P E +E+++++ + + K A+ QDFEKA LRD
Sbjct: 399 FLPDKAIDLIDEAGARLRIQRMTAPPELKEVDEKIAKTRRAKEAAIDAQDFEKAASLRDE 458
Query: 308 EMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRL 367
E L ++ + +K ++ E + VV I +++ TGIPV K++ ES +L
Sbjct: 459 EKKLASERA---EKEEQWRSGEDK---TKLVVDAEQIAEVLAMATGIPVFKLTQAESSKL 512
Query: 368 LKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALA 427
L+ME+ LHKR+IGQ+EAVKA+S++IRR R GLK+P RP SFIF+GPTGVGK+ELAKALA
Sbjct: 513 LRMEDELHKRIIGQNEAVKAVSQSIRRTRAGLKDPKRPGGSFIFAGPTGVGKTELAKALA 572
Query: 428 AYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEI 487
+ FG E A+I+LDMSEF E+HT S+L GSPPGYVGY EGGQLTE VRR+P++VVLFDE+
Sbjct: 573 EFLFGDENALIQLDMSEFSEKHTASRLFGSPPGYVGYDEGGQLTEKVRRKPFSVVLFDEV 632
Query: 488 EKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYD 547
EKAHPD+FN +LQ+LE+G LTDS+GR VDFKNT++IMT+N+G+ I K G GF
Sbjct: 633 EKAHPDIFNSLLQVLEEGHLTDSQGRLVDFKNTIIIMTTNLGTRDINK-GVLTGFQAS-G 690
Query: 548 EKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKT 607
E + Y R+K V EELKQ+FRPEFLNR+DE++VF QL K E+ +I D+M+K++ DR+
Sbjct: 691 ELATDYQRMKGKVQEELKQHFRPEFLNRVDEVVVFPQLQKEEILKIVDLMIKKLDDRMLE 750
Query: 608 KDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDV 667
+ + +++T R + +G++ + GARPLRRA+ R +ED ++EK+L E+ EG +V+ DV
Sbjct: 751 QGMAIKLTPEARALLAYKGFDKTLGARPLRRAVQREIEDVLSEKILFNELHEGQTVLADV 810
Query: 668 D 668
D
Sbjct: 811 D 811
>gi|374856140|dbj|BAL58994.1| ATP-dependent Clp protease ATP-binding subunit ClpC [uncultured
candidate division OP1 bacterium]
Length = 810
Score = 758 bits (1958), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/660 (57%), Positives = 498/660 (75%), Gaps = 15/660 (2%)
Query: 27 EYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQR 86
EYG NL + A EG+LDPV+GR +I ++Q L RR KNNP ++GEPGVGKTAI EGLAQR
Sbjct: 162 EYGRNLVEEAREGRLDPVIGRDKEINSIIQTLSRRKKNNPVIVGEPGVGKTAIVEGLAQR 221
Query: 87 IASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTL 146
IASGDVP + GK++I LDM +VAGTKYRGEFE+RLK ++ + +S +ILFIDE+HT+
Sbjct: 222 IASGDVPAPLLGKEIIELDMAAIVAGTKYRGEFEQRLKAIVNAVIESGNVILFIDELHTV 281
Query: 147 IGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSV 206
+GAG AEGAIDA+ ILKP LA G +QCIG TLDEYRK+IEKD ALERRF+ + V EP +
Sbjct: 282 VGAGGAEGAIDASAILKPPLASGLIQCIGTATLDEYRKYIEKDAALERRFKKIVVEEPQI 341
Query: 207 DETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRL 266
+ T+QILKGLR RYE HH+++ TD AL +AA+LS +YI+D FLPDKAIDLIDE ++ RL
Sbjct: 342 EATVQILKGLRPRYEAHHRVKITDGALYAAAKLSDRYITDHFLPDKAIDLIDETAAKKRL 401
Query: 267 RHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMS 326
+ E RELE +LR + ++KN A+ Q++E+A +LRD E L+ ++ L +M
Sbjct: 402 ETSSFSPEIRELEDQLRALAEQKNAAISEQNYERAAQLRDAERQLQERLREL-----KME 456
Query: 327 KAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVK 386
E EA VVTE DI +VS+WTG+PV + +ES R+L MEE +HKR I QDEAVK
Sbjct: 457 FHEYEA-----VVTEDDIAQMVSSWTGVPVGHMKMEESKRVLTMEEEIHKRYIDQDEAVK 511
Query: 387 AISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFM 446
A++RAIRRA G+K+P RPI SF+F GPTGVGK+ELAKA+A + FG EEA+IR+DMSE+M
Sbjct: 512 AVARAIRRAYAGVKDPKRPIGSFLFLGPTGVGKTELAKAIAEFLFGDEEAIIRIDMSEYM 571
Query: 447 ERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGR 506
ER +VS+LIG+PPGYVGY E G+LTEAVRRRPY+VVLFDEIEKAH DVFN++LQ+++DG
Sbjct: 572 ERFSVSRLIGAPPGYVGYEEAGELTEAVRRRPYSVVLFDEIEKAHRDVFNILLQVMDDGA 631
Query: 507 LTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDS--SYNRIKSLVTEEL 564
LTDS+GR VDF+NT+LIMTSN+GS I +GF + DE DS SY ++S V E+
Sbjct: 632 LTDSQGRRVDFRNTVLIMTSNIGSKTI-TDRTALGFSVS-DEVDSKESYTEMRSRVMSEV 689
Query: 565 KQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVE 624
K++FRPEFLNRLD++IVF Q TK + +IA++ L+E+ +RL+ ++I + VTE +E +++
Sbjct: 690 KEFFRPEFLNRLDDIIVFHQHTKENIYKIAELKLRELAERLREREIFISVTEEAKELLIK 749
Query: 625 EGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNGSSGAPE 684
EGY+P YGARPL R + RL+E+ +++K+L E +GDS+I+D DG + PE
Sbjct: 750 EGYDPKYGARPLVRTLERLIENPISDKILEGEFVKGDSIIIDA-KDGQICFSKKEEKTPE 808
>gi|315446238|ref|YP_004079117.1| chaperone ATPase [Mycobacterium gilvum Spyr1]
gi|315264541|gb|ADU01283.1| ATPase with chaperone activity, ATP-binding subunit [Mycobacterium
gilvum Spyr1]
Length = 847
Score = 758 bits (1958), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/649 (58%), Positives = 504/649 (77%), Gaps = 15/649 (2%)
Query: 24 TLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGL 83
L+++G NLT A EGKLDPV+GR+ +IERV+Q+L RRTKNNP LIGEPGVGKTA+ EGL
Sbjct: 170 VLDQFGRNLTAAAMEGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGL 229
Query: 84 AQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEV 143
AQ I GDVP+T++ K++ TLD+G LVAG++YRG+FEERLKK+++EI +IILFIDE+
Sbjct: 230 AQAIVHGDVPETLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDEL 289
Query: 144 HTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPE 203
HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEYRK+IEKD ALERRFQPV+V E
Sbjct: 290 HTLVGAGAAEGAIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGE 349
Query: 204 PSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSR 263
P+V TI+ILKGLR+RYE HH++ TD A+ +AA L+ +YI+DRFLPDKAIDLIDEAG+R
Sbjct: 350 PTVAHTIEILKGLRDRYEAHHRVSITDGAIAAAATLADRYINDRFLPDKAIDLIDEAGAR 409
Query: 264 VRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGK 323
+R+R P + RE ++++ +EK A+ QDFEKA LRD+E L AQ +
Sbjct: 410 MRIRRMTAPPDLREFDEKIADARREKESAIDAQDFEKAASLRDKEKQLVAQ--------R 461
Query: 324 EMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIG 380
+ + +GD+ VV EVD I ++ WTGIPV K++ +E+ RLL+ME+ LHKR+IG
Sbjct: 462 AEREKQWRSGDL-DVVAEVDDEQIAEVLGNWTGIPVFKLTEEETTRLLRMEDELHKRIIG 520
Query: 381 QDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRL 440
Q++AVKA+S+AIRR R GLK+P RP SFIF+GP+GVGK+EL+KALA + FG ++A+I++
Sbjct: 521 QEDAVKAVSKAIRRTRAGLKDPKRPSGSFIFAGPSGVGKTELSKALANFLFGDDDALIQI 580
Query: 441 DMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQ 500
DM EF +R T S+L G+PPGYVGY EGGQLTE VRR+P++VVLFDEIEKAH +++N +LQ
Sbjct: 581 DMGEFHDRFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNSLLQ 640
Query: 501 ILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLV 560
+LEDGRLTD +GRTVDFKNT+LI TSN+G+S I K +G D++Y R+K V
Sbjct: 641 VLEDGRLTDGQGRTVDFKNTVLIFTSNLGTSDISKA---VGLGFTQGGGDNNYERMKQKV 697
Query: 561 TEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRE 620
+ELK++FRPEFLNR+D++IVF QLT+ E+ ++ D+M+ V ++LK KD+ +++T + +
Sbjct: 698 HDELKKHFRPEFLNRIDDIIVFHQLTQDEIIQMVDLMIGRVGNQLKAKDMAMELTPKAKA 757
Query: 621 RVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDS 669
+ + G++P GARPLRR I R +ED ++EK+L E+ G V VDV++
Sbjct: 758 LLAKRGFDPVLGARPLRRTIQREIEDQLSEKILFEELGPGQLVTVDVEN 806
>gi|126437706|ref|YP_001073397.1| ATPase [Mycobacterium sp. JLS]
gi|126237506|gb|ABO00907.1| ATPase AAA-2 domain protein [Mycobacterium sp. JLS]
Length = 847
Score = 758 bits (1958), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 373/653 (57%), Positives = 503/653 (77%), Gaps = 25/653 (3%)
Query: 25 LEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLA 84
L+++G NLT A EGKLDPV+GR+ +IERV+Q+L RRTKNNP LIGEPGVGKTA+ EGLA
Sbjct: 171 LDQFGRNLTAAAMEGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLA 230
Query: 85 QRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVH 144
Q I G+VP+T++ K++ TLD+G LVAG++YRG+FEERLKK+++EI +IILFIDE+H
Sbjct: 231 QAIVHGEVPETLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDELH 290
Query: 145 TLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEP 204
TL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEYRK+IEKD ALERRFQPV+V EP
Sbjct: 291 TLVGAGAAEGAIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEP 350
Query: 205 SVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRV 264
+V+ TI+ILKGLR+RYE HH++ TD A+V+AA L+ +YI+DRFLPDKAIDLIDEAG+R+
Sbjct: 351 TVEHTIEILKGLRDRYEAHHRVSITDSAMVAAATLADRYINDRFLPDKAIDLIDEAGARM 410
Query: 265 RLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKE 324
R+R P + RE ++++ +EK A+ QDFEKA LRD+E L AQ +
Sbjct: 411 RIRRMTAPPDLREFDEKIADARREKESAIDAQDFEKAASLRDKEKQLVAQ--------RA 462
Query: 325 MSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQ 381
+ + +GD+ VV EVD I ++ WTGIPV K++ +E+ RLL+ME+ LHKR+IGQ
Sbjct: 463 EREKQWRSGDL-DVVAEVDDEQIAEVLGNWTGIPVFKLTEEETTRLLRMEDELHKRIIGQ 521
Query: 382 DEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLD 441
++AVKA+S+AIRR R GLK+P RP SFIF+GP+GVGK+EL+KALA + FG ++A+I++D
Sbjct: 522 EDAVKAVSKAIRRTRAGLKDPKRPSGSFIFAGPSGVGKTELSKALANFLFGDDDALIQID 581
Query: 442 MSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQI 501
M EF +R T S+L G+PPGYVGY EGGQLTE VRR+P++VVLFDEIEKAH +++N +LQ+
Sbjct: 582 MGEFHDRFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNSLLQV 641
Query: 502 LEDGRLTDSKGRTVDFKNTLLIMTSN-----VGSSVIEKGGRRIGFDLDYDEKDSSYNRI 556
LEDGRLTD +GRTVDFKNT+LI TSN + +V G +++Y R+
Sbjct: 642 LEDGRLTDGQGRTVDFKNTVLIFTSNLGTSDISKAV--------GLGFTQGGGENNYERM 693
Query: 557 KSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTE 616
K V +ELK++FRPEFLNR+D++IVF QLT+ E+ ++ D+M+ V ++L+ KD+ +++T+
Sbjct: 694 KQKVNDELKKHFRPEFLNRIDDIIVFHQLTQDEIIKMVDLMIGRVGNQLRAKDMTMELTD 753
Query: 617 RFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDS 669
R + + + G++P GARPLRR I R +ED ++EK+L EI G + VDV++
Sbjct: 754 RAKSLLAKRGFDPVLGARPLRRTIQREIEDQLSEKILFEEIGPGQLITVDVEN 806
>gi|15843209|ref|NP_338246.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Mycobacterium
tuberculosis CDC1551]
gi|13883563|gb|AAK48060.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Mycobacterium
tuberculosis CDC1551]
Length = 848
Score = 758 bits (1958), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/649 (58%), Positives = 503/649 (77%), Gaps = 15/649 (2%)
Query: 24 TLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGL 83
L+++G NLT A EGKLDPV+GR+ +IERV+Q+L RRTKNNP LIGEPGVGKTA+ EGL
Sbjct: 170 VLDQFGRNLTAAAMEGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGL 229
Query: 84 AQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEV 143
AQ I G+VP+T++ K++ TLD+G LVAG++YRG+FEERLKK+++EI +IILFIDE+
Sbjct: 230 AQAIVHGEVPETLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDEL 289
Query: 144 HTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPE 203
HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEYRK+IEKD ALERRFQPV+V E
Sbjct: 290 HTLVGAGAAEGAIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGE 349
Query: 204 PSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSR 263
P+V+ TI+ILKGLR+RYE HH++ TD A+V+AA L+ +YI+DRFLPDKAIDLIDEAG+R
Sbjct: 350 PTVEHTIEILKGLRDRYEAHHRVSITDAAMVAAATLADRYINDRFLPDKAIDLIDEAGAR 409
Query: 264 VRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGK 323
+R+R P + RE ++++ + +EK A+ QDFEKA LRDRE L AQ +
Sbjct: 410 MRIRRMTAPPDLREFDEKIAEARREKESAIDAQDFEKAASLRDREKTLVAQ--------R 461
Query: 324 EMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIG 380
+ + +GD+ VV EVD I ++ WTGIPV K++ E+ RLL+MEE LHKR+IG
Sbjct: 462 AEREKQWRSGDL-DVVAEVDDEQIAEVLGNWTGIPVFKLTEAETTRLLRMEEELHKRIIG 520
Query: 381 QDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRL 440
Q++AVKA+S+AIRR R GLK+P RP SFIF+GP+GVGK+EL+KALA + FG ++A+I++
Sbjct: 521 QEDAVKAVSKAIRRTRAGLKDPKRPSGSFIFAGPSGVGKTELSKALANFLFGDDDALIQI 580
Query: 441 DMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQ 500
DM EF +R T S+L G+PPGYVGY EGGQLTE VRR+P++VVLFDEIEKAH +++N +LQ
Sbjct: 581 DMGEFHDRFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNSLLQ 640
Query: 501 ILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLV 560
+LEDGRLTD +GRTVDFKNT+LI TSN+G+S I K +G ++ Y R+K V
Sbjct: 641 VLEDGRLTDGQGRTVDFKNTVLIFTSNLGTSDISKP---VGLGFSKGGGENDYERMKQKV 697
Query: 561 TEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRE 620
+ELK++FRPEFLNR+D++IVF QLT+ E+ + D+M+ V +LK+KD+ L +T+ +
Sbjct: 698 NDELKKHFRPEFLNRIDDIIVFHQLTREEIIRMVDLMISRVAGQLKSKDMALVLTDAAKA 757
Query: 621 RVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDS 669
+ + G++P GARPLRR I R +ED ++EK+L E+ G V VDVD+
Sbjct: 758 LLAKRGFDPVLGARPLRRTIQREIEDQLSEKILFEEVGPGQVVTVDVDN 806
>gi|385653550|ref|ZP_10048103.1| ATP-dependent Clp protease, ATP-binding subunit [Leucobacter
chromiiresistens JG 31]
Length = 841
Score = 758 bits (1957), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/677 (56%), Positives = 508/677 (75%), Gaps = 21/677 (3%)
Query: 3 GESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRT 62
G+ + VGA GG S L+++G NLT+ A EGKLDPV+GR+ ++ERV+QIL RR+
Sbjct: 148 GKESATVGAPESGGESKGSQ-VLDQFGRNLTQAAREGKLDPVIGREKEVERVMQILSRRS 206
Query: 63 KNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEER 122
KNNP LIGEPGVGKTA+ EGLAQ I G+VP+T++ K+V LD+G ++AG++YRG+FEER
Sbjct: 207 KNNPVLIGEPGVGKTAVVEGLAQAIIKGEVPETLKDKQVYVLDLGSMIAGSRYRGDFEER 266
Query: 123 LKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEY 182
LKK+ +EI+ +II+FIDE+HTL+GAGAAEGAIDAANILKP LARGELQ IGATTLDEY
Sbjct: 267 LKKVTKEIRNRGDIIIFIDEIHTLVGAGAAEGAIDAANILKPMLARGELQTIGATTLDEY 326
Query: 183 RKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQ 242
RKH EKD ALERRFQ ++V EPS+ +I ILKGLR+RYE HHK+ TD A+V+A L+ +
Sbjct: 327 RKHFEKDAALERRFQSIQVAEPSLPHSINILKGLRDRYEAHHKVSITDGAIVAAVNLADR 386
Query: 243 YISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAG 302
Y+ DRFLPDKAIDLIDEAG+R+RL P E RE ++++ + EK +A+ GQDFE A
Sbjct: 387 YVQDRFLPDKAIDLIDEAGARLRLSILSSPPELREFDEKIAVVRAEKEQAIEGQDFEAAA 446
Query: 303 ELRDREMDLKAQ---ISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 359
RD E L A+ + G ++AE + G + V+ + TGIPV K+
Sbjct: 447 NKRDEEKKLIAERLRLEKQWRSGNVATQAEVDEGLIAEVLAQA---------TGIPVFKL 497
Query: 360 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 419
+ +E+ RL MEE LH+RVIGQ+EA+ A+++ IRR R GLK+P RP SFIF+GPTGVGK
Sbjct: 498 TEEETSRLRFMEEALHQRVIGQNEAISALAKTIRRQRAGLKDPKRPSGSFIFAGPTGVGK 557
Query: 420 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 479
+ELAKALA + F E+A+I LDMSE+ E+HTVS+L G+PPG+VG+ EGGQLTE VRR+P+
Sbjct: 558 TELAKALAEFLFDDEDALISLDMSEYGEKHTVSRLFGAPPGFVGFEEGGQLTEKVRRKPF 617
Query: 480 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 539
+VVLFDEIEKAHPD+FN +LQILE+GRLTD +GR +DFKNT++IMT+N+GS+ I G
Sbjct: 618 SVVLFDEIEKAHPDIFNSLLQILEEGRLTDGQGRVIDFKNTVIIMTTNLGSTAI--AGGP 675
Query: 540 IGFDLDYDEKDSS--YNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIM 597
+GF + E DSS Y+ +K V EELK++F+PEFLNR+D+ IVF QLTK E+ +I D+
Sbjct: 676 VGFQI---EGDSSVGYDMMKGKVNEELKKHFKPEFLNRVDDTIVFPQLTKPELLQIVDLF 732
Query: 598 LKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREI 657
+K++ DRL +D+ ++++ RER+ E GY+P+ GARPLRRA+ R +ED ++E++L+ E+
Sbjct: 733 VKQLKDRLLDRDMHIEISTAARERLAEVGYDPTLGARPLRRAMQREIEDRLSERILSAEL 792
Query: 658 KEGDSVIVDVDSDGNVT 674
GD V VD DG T
Sbjct: 793 LAGDLVKVDF-VDGEFT 808
>gi|227489371|ref|ZP_03919687.1| ATP-dependent protease, ATPase subunit [Corynebacterium
glucuronolyticum ATCC 51867]
gi|227090744|gb|EEI26056.1| ATP-dependent protease, ATPase subunit [Corynebacterium
glucuronolyticum ATCC 51867]
Length = 870
Score = 758 bits (1956), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 379/657 (57%), Positives = 514/657 (78%), Gaps = 11/657 (1%)
Query: 14 GGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPG 73
G G N + TL+++G NLT+LA++GKLDPVVGR+ +IER++Q+L RRTKNNP LIGEPG
Sbjct: 178 GPGERSNSL-TLDKFGRNLTQLAKDGKLDPVVGREKEIERIMQVLSRRTKNNPVLIGEPG 236
Query: 74 VGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQS 133
VGKTA+ EGLA I +G VP+T+ K++ +LD+G LVAG++YRG+FEERLKK+++EI Q
Sbjct: 237 VGKTAVVEGLALDIVNGRVPETLRDKQLYSLDLGSLVAGSRYRGDFEERLKKVLKEINQR 296
Query: 134 DEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALE 193
+IILFIDE+HT++GAGAAEGAIDAA++LKP LARGELQ IGATTLDEYRKHIEKD ALE
Sbjct: 297 GDIILFIDEIHTIVGAGAAEGAIDAASLLKPKLARGELQTIGATTLDEYRKHIEKDAALE 356
Query: 194 RRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKA 253
RRFQPV VPEPSV++TIQILKGLR+RYE HH++ TD AL +AA LS +YI+DRFLPDKA
Sbjct: 357 RRFQPVNVPEPSVEDTIQILKGLRDRYEAHHRVSITDGALAAAASLSDRYINDRFLPDKA 416
Query: 254 IDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKA 313
+DLIDEAG+R+R++ PE RE+++ + ++ EK A+ QDFEKA LRD E L
Sbjct: 417 VDLIDEAGARMRIKRMTAPEGLREIDERIAKVRGEKEAAIDAQDFEKAAGLRDNERKLTE 476
Query: 314 QISALVDKGKEMSKAE-TEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEE 372
+ + +K K+ E E +VG E I +++ WTGIPV K++ +ES RL+ ME+
Sbjct: 477 ERA---EKEKQWRTGELQEIAEVG----EEQIAEVLANWTGIPVFKLTEEESSRLIHMED 529
Query: 373 TLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFG 432
LHKR+IGQ++AVKA+SRAIRR R GLK+PNRP SFIF+GP+GVGK+EL+KALA + FG
Sbjct: 530 ELHKRIIGQEDAVKAVSRAIRRTRAGLKDPNRPSGSFIFAGPSGVGKTELSKALAEFLFG 589
Query: 433 SEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHP 492
++++I++DM EF ++ T S+L G+PPGYVGY EGGQLTE VRR+P++VVLFDEIEKAH
Sbjct: 590 DDDSLIQIDMGEFHDKFTASRLFGAPPGYVGYDEGGQLTEKVRRKPFSVVLFDEIEKAHK 649
Query: 493 DVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYD-EKDS 551
+++N +LQ+LE+GRLTD +GR VDFKNT+LI TSN+G+ I K +GF + + + D+
Sbjct: 650 EIYNTLLQVLEEGRLTDGQGRVVDFKNTVLIFTSNLGTQDISK-AVGMGFTANNETDDDA 708
Query: 552 SYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIE 611
Y R+K VT+ELK++FRPEFLNR+DE++VF+QLT+ ++ ++ D++ V L+ KD+
Sbjct: 709 KYERMKDKVTDELKKHFRPEFLNRIDEIVVFKQLTREQIVQMVDLLTARVAKMLREKDMG 768
Query: 612 LQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVD 668
L++TE+ + + + G++P GARPLRR I R +ED+++EK+L E+ G+ V VDVD
Sbjct: 769 LEITEKAKNLLAKRGFDPVLGARPLRRTIQREIEDALSEKILFGEVGAGEIVTVDVD 825
>gi|345858493|ref|ZP_08810886.1| negative regulator of genetic competence clpC/mecB
[Desulfosporosinus sp. OT]
gi|344328512|gb|EGW39897.1| negative regulator of genetic competence clpC/mecB
[Desulfosporosinus sp. OT]
Length = 813
Score = 758 bits (1956), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 383/651 (58%), Positives = 511/651 (78%), Gaps = 10/651 (1%)
Query: 23 PTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEG 82
P L E+G +LT A E +LDPV+GR+ +IERV+Q+L RRTKNNP LIGEPGVGKTAIAEG
Sbjct: 168 PALNEFGRDLTVQAREARLDPVIGREKEIERVIQVLSRRTKNNPALIGEPGVGKTAIAEG 227
Query: 83 LAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDE 142
LAQ I VP+ + K+VITLD+ +VAG+KYRGEFEERLKK+MEEI+ IILFIDE
Sbjct: 228 LAQSIIGNKVPEILLNKRVITLDLSAMVAGSKYRGEFEERLKKVMEEIRADGNIILFIDE 287
Query: 143 VHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVP 202
+HTLIGAGAAEGAIDAANILKP+LARGELQCIGATTL+EYRK+IEKD ALERRFQP+ V
Sbjct: 288 LHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLEEYRKYIEKDSALERRFQPITVD 347
Query: 203 EPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGS 262
EP+V+E I+IL GL +RYE HH+++ TDEA+ +AA+LS +YISDRFLPDKAIDL+DEA S
Sbjct: 348 EPTVEEAIRILHGLCDRYEAHHRVKITDEAIEAAARLSDRYISDRFLPDKAIDLMDEAAS 407
Query: 263 RVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKG 322
RVRL P + + LE+E ++ KEK AV Q+FEKA ++RD+E L+ +++ +
Sbjct: 408 RVRLASFTAPPDLKLLEEEAERLKKEKEAAVSSQEFEKAAQIRDQEHKLRVELAGQREAW 467
Query: 323 KEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQD 382
+ + E+ VT DI IV++WTGIPV+K++ +ES+RLL +EE LH+R+IGQ+
Sbjct: 468 ENLRYKESAQ------VTADDIAQIVASWTGIPVKKLAQEESERLLHLEEILHQRLIGQE 521
Query: 383 EAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDM 442
+AV A++RA+RRAR GL++P RPI SFIF GPTGVGK+EL +ALA FG E+A+IR+DM
Sbjct: 522 DAVTAVARAVRRARAGLRDPKRPIGSFIFLGPTGVGKTELGRALAEAMFGDEKALIRIDM 581
Query: 443 SEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQIL 502
SE+ME+H VS+L+G+PPGY+G+ EGGQLTE+VRR+PY+VVL DEIEKAHP+VFN++LQ+L
Sbjct: 582 SEYMEKHAVSRLVGAPPGYIGHDEGGQLTESVRRKPYSVVLLDEIEKAHPEVFNILLQVL 641
Query: 503 EDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTE 562
EDGRLTD+KGRTVDF+NT++IMTSNVGSS ++K +GF DEK + Y + V
Sbjct: 642 EDGRLTDTKGRTVDFRNTVIIMTSNVGSSFLKKEA--MGFAPKKDEK-ADYKNMHGQVMA 698
Query: 563 ELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERV 622
ELK+ FRPEFLNR+DE++VF L + +++I +I++ ++ RL ++L++ + +
Sbjct: 699 ELKRTFRPEFLNRIDELVVFHALQEEHLEKITEILMSQMNKRLGEHGLKLEIEKSATLLI 758
Query: 623 VEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNV 673
+EG +P +GARPLRRAI RL+ED+++EK+L E K+GD++ V+ + DG +
Sbjct: 759 AKEGNDPVFGARPLRRAIQRLIEDALSEKILEGEFKDGDTIGVEAE-DGKM 808
>gi|423349871|ref|ZP_17327526.1| hypothetical protein HMPREF9156_01064 [Scardovia wiggsiae F0424]
gi|393702363|gb|EJD64569.1| hypothetical protein HMPREF9156_01064 [Scardovia wiggsiae F0424]
Length = 894
Score = 757 bits (1955), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/706 (53%), Positives = 531/706 (75%), Gaps = 32/706 (4%)
Query: 11 AGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIG 70
G+G S N L+++G NLT A +GKLDPV+GR +IERV+ +L RRTKNNP LIG
Sbjct: 158 GGMGDQSGKNGSSLLDQFGRNLTAEAGDGKLDPVIGRSNEIERVMVVLSRRTKNNPVLIG 217
Query: 71 EPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEI 130
EPGVGKTA+ EGLAQ+I +GDVP+T++GK+V LD+G ++AG++YRG+FEERLKK+++EI
Sbjct: 218 EPGVGKTAVVEGLAQKIVAGDVPETLKGKQVYALDLGSMIAGSRYRGDFEERLKKVLKEI 277
Query: 131 KQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDP 190
+ +I+LFIDE+HT++GAG+A+GA+ A+++LKP LARGELQ IGATT DEYRK+IEKD
Sbjct: 278 RTRGDIVLFIDEIHTIVGAGSADGAMGASDMLKPMLARGELQTIGATTTDEYRKYIEKDA 337
Query: 191 ALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLP 250
ALERRFQP++V EP++ ETI+ILKGLR++YE HH + TDEA+ SAA+LS +YI DR LP
Sbjct: 338 ALERRFQPIQVAEPTIAETIEILKGLRKKYEDHHHVTITDEAIQSAAELSARYIQDRNLP 397
Query: 251 DKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMD 310
DKAIDLIDEAG+R+R++ P +EL+ ++ ++ +K++A+ QDFEKA LRD +
Sbjct: 398 DKAIDLIDEAGARLRIKRLTAPSALKELDIKVEKVKSDKDKAIADQDFEKAASLRDAQEK 457
Query: 311 LKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKM 370
L+ + K KE S E E+ DV VV E I +++S+ TGIPV K++ ES +LL M
Sbjct: 458 LEQE-----RKDKEKSWREGES-DVSMVVDEDTIANVISSSTGIPVFKLTETESKKLLNM 511
Query: 371 EETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYY 430
E LHKRVIGQDEAV+A+SR+IRR RVGLK+P RP SFIF+GPTGVGK+ELAK LA Y
Sbjct: 512 ESELHKRVIGQDEAVEALSRSIRRTRVGLKDPKRPSGSFIFAGPTGVGKTELAKTLAEYL 571
Query: 431 FGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKA 490
F E+A+IR+DMSEF E+++ S+L G+PPGYVGY EGG+LTE VRR+P++V+LFDEIEKA
Sbjct: 572 FDDEDALIRVDMSEFGEKYSTSRLFGAPPGYVGYEEGGELTEKVRRKPFSVILFDEIEKA 631
Query: 491 HPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKD 550
HPD+FN +LQ+L+DG LTD +GR VDFKNT++IMT+N+G+S I + + GF++ + D
Sbjct: 632 HPDIFNTLLQVLDDGHLTDGQGRKVDFKNTIIIMTTNLGTSKISQ-AQSTGFNIGGN-TD 689
Query: 551 SSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDI 610
+SY R+K V ELK FRPEFLNRLD++IVFRQLT+ EV++I ++ ++ + DRL + +
Sbjct: 690 TSYQRMKDQVQSELKGQFRPEFLNRLDDIIVFRQLTEPEVRQIVELDVRTLNDRLFERHM 749
Query: 611 ELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSD 670
+++T ++ + ++G++P GARPL+R I R +ED+++EK+L ++KE + ++VD + +
Sbjct: 750 SVELTGAAKDLLAQKGFDPLLGARPLQRVIQRDVEDAISEKILLGDLKENEQIVVDAEGE 809
Query: 671 G------------NVTVLNGS-----------SGAPES-LADPLPV 692
G + +V NG +G+PE A+P+PV
Sbjct: 810 GILGEFTFTSRPFDFSVGNGGGIPAADSGDTEAGSPEGPSAEPVPV 855
>gi|294787498|ref|ZP_06752751.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Parascardovia
denticolens F0305]
gi|315226925|ref|ZP_07868713.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Parascardovia
denticolens DSM 10105 = JCM 12538]
gi|294484854|gb|EFG32489.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Parascardovia
denticolens F0305]
gi|315121057|gb|EFT84189.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Parascardovia
denticolens DSM 10105 = JCM 12538]
Length = 862
Score = 757 bits (1955), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/664 (55%), Positives = 519/664 (78%), Gaps = 8/664 (1%)
Query: 8 AVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPC 67
A GV ++ + L+++G NL + A++GKLDPV+GR +IERV+ +L RRTKNNP
Sbjct: 155 ANSGGVADKTNRSGSSLLDQFGRNLAQEAKDGKLDPVIGRSNEIERVMVVLSRRTKNNPV 214
Query: 68 LIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLM 127
LIGEPGVGKTA+ EGLA++I + DVP+T++ K++ LD+G ++AG++YRG+FEERLKK++
Sbjct: 215 LIGEPGVGKTAVVEGLAEKIVADDVPETLKDKQIYALDLGSMIAGSRYRGDFEERLKKVL 274
Query: 128 EEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIE 187
+EI+ +++LFIDE+HT++GAG+A+GA+ A+++LKP LARGELQ IGATT +EYRK+IE
Sbjct: 275 KEIQVRGDVVLFIDEIHTIVGAGSADGAMGASDMLKPMLARGELQTIGATTTEEYRKYIE 334
Query: 188 KDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDR 247
KD ALERRFQP++V EP++ ETI+ILKGLR++YE HH + TDEA+ +AA+LS +YI DR
Sbjct: 335 KDAALERRFQPIQVAEPTIAETIEILKGLRKKYEDHHHVTITDEAIQAAAELSSRYIQDR 394
Query: 248 FLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDR 307
LPDKAIDLIDEAG+R+R++ P +EL+ ++ ++ +K++A+ QDFEKA LRD
Sbjct: 395 HLPDKAIDLIDEAGARLRIKRLTAPSALKELDMKVAKVKADKDQAIADQDFEKAASLRDA 454
Query: 308 EMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRL 367
+ L+ + K KE S E E+ DV VVTE I H++S+ TGIPV K++ ES +L
Sbjct: 455 QEKLEQE-----RKDKEKSWREGES-DVSMVVTEDTIAHVISSSTGIPVFKLTETESKKL 508
Query: 368 LKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALA 427
L ME+ LHKRVIGQDEAV A++R+IRRARVGLK+P RP SFIF+GPTGVGK+ELAKALA
Sbjct: 509 LGMEDALHKRVIGQDEAVSALARSIRRARVGLKDPKRPSGSFIFAGPTGVGKTELAKALA 568
Query: 428 AYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEI 487
Y F E+A+IR+DMSEF E+++ S+L G+PPGYVGY EGG+LTE VRR+P++V+LFDEI
Sbjct: 569 EYLFDDEDALIRVDMSEFGEKYSTSRLFGAPPGYVGYEEGGELTEKVRRKPFSVILFDEI 628
Query: 488 EKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYD 547
EKAHPD+FN +LQ+L+DG LTD +GR VDFKNT++IMT+N+G+S I + + GF+L
Sbjct: 629 EKAHPDIFNTLLQVLDDGHLTDGQGRKVDFKNTIIIMTTNLGTSKISQ-AQNTGFNLG-G 686
Query: 548 EKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKT 607
+ ++SY R+K V ELK FRPEFLNRLD++IVF+QLT+ +V++I D+ +K + DRL
Sbjct: 687 QTETSYQRMKDQVQSELKGQFRPEFLNRLDDIIVFKQLTEPQVRQIVDLDVKALNDRLFE 746
Query: 608 KDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDV 667
+ + +++T++ ++ + E+G++P GARPLRR I R +ED+++EK+L ++KE ++VD
Sbjct: 747 RHMTVELTDKAKDLLAEKGFDPLLGARPLRRVIQRDIEDAISEKILLGDLKENQEIVVDA 806
Query: 668 DSDG 671
+ +G
Sbjct: 807 EGEG 810
>gi|395237684|ref|ZP_10415722.1| putative ATP-dependent Clp protease ATP-binding subunit [Turicella
otitidis ATCC 51513]
gi|423351385|ref|ZP_17329036.1| hypothetical protein HMPREF9719_01331 [Turicella otitidis ATCC
51513]
gi|394487003|emb|CCI83810.1| putative ATP-dependent Clp protease ATP-binding subunit [Turicella
otitidis ATCC 51513]
gi|404386569|gb|EJZ81723.1| hypothetical protein HMPREF9719_01331 [Turicella otitidis ATCC
51513]
Length = 925
Score = 757 bits (1955), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 376/670 (56%), Positives = 517/670 (77%), Gaps = 9/670 (1%)
Query: 24 TLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGL 83
LE++G NLT+ A++G+LDPVVGR+ +IERV+Q+L RRTKNNP LIGEPGVGKTA+ EGL
Sbjct: 184 VLEQFGRNLTQAAKDGELDPVVGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGL 243
Query: 84 AQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEV 143
A I + VP+T++ K+V +LD+G LVAG++YRG+FEERLKK+++EI Q +IILFIDE+
Sbjct: 244 ALDIVNEKVPETLKDKQVYSLDLGSLVAGSRYRGDFEERLKKVLKEINQRGDIILFIDEI 303
Query: 144 HTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPE 203
HT++GAGAAEGAIDAA++LKP LARGELQ IGATTLDEYRKHIEKD ALERRFQPV+VPE
Sbjct: 304 HTMVGAGAAEGAIDAASLLKPKLARGELQTIGATTLDEYRKHIEKDAALERRFQPVQVPE 363
Query: 204 PSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSR 263
PSV+ TI++LKGLR+RYE HH++ TD AL +AA+LS +YISDR+LPDKA+DLIDEAG+R
Sbjct: 364 PSVELTIEVLKGLRDRYEAHHRVSITDGALAAAARLSDRYISDRYLPDKAVDLIDEAGAR 423
Query: 264 VRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGK 323
+R++ PE RE++ ++ ++ EK +A+ QDFE+A +LRD+E L + + K
Sbjct: 424 MRIKRMTAPEGLREIDDKIAEVRSEKEKAIDKQDFEEASKLRDKERQLTEE------RNK 477
Query: 324 EMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDE 383
+ S+ + D V E I ++ WTGIPV K++ +ES RLLKME+ LHKR+IGQDE
Sbjct: 478 KDSEWRDKEADQIAEVGEEQIAEVLGGWTGIPVLKLTEEESSRLLKMEDELHKRIIGQDE 537
Query: 384 AVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMS 443
AV+++SRAIRR R GLK+PNRP SFIF+GP+GVGK+EL+KALA + FG E+A+I++DM
Sbjct: 538 AVRSVSRAIRRTRAGLKDPNRPSGSFIFAGPSGVGKTELSKALAEFLFGEEDALIQIDMG 597
Query: 444 EFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILE 503
EF ++ T S+L G+PPGYVGY EGGQLTE VRR+P++VVLFDEIEKAH +V+N +LQ+LE
Sbjct: 598 EFHDKFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHKEVYNTLLQVLE 657
Query: 504 DGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYD-EKDSSYNRIKSLVTE 562
+GRLTD +GR VDFKNT+LI TSN+G+ I K +GF + ++++ Y R+KS V +
Sbjct: 658 EGRLTDGQGRVVDFKNTVLIFTSNLGTGDISK-PVGMGFTGSSESDEEARYERMKSKVND 716
Query: 563 ELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERV 622
ELK++FRPEFLNR+D+++VFRQL + E+ ++ +++++ V L +D+ +++T + +
Sbjct: 717 ELKKHFRPEFLNRIDDIVVFRQLGREEIVKMVELLIQRVEKMLNERDMGIELTNEAKHLL 776
Query: 623 VEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDS-DGNVTVLNGSSG 681
+G++P GARPLRRAI R +ED ++EK+L E+ G+ V V V++ DG + +
Sbjct: 777 AAKGFDPVLGARPLRRAIQREIEDVLSEKILFGEVGAGEIVAVGVENWDGEDKHADQARF 836
Query: 682 APESLADPLP 691
E A PLP
Sbjct: 837 TFEPHAKPLP 846
>gi|306836895|ref|ZP_07469849.1| ATP-dependent Clp protease ATP-binding subunit ClpC
[Corynebacterium accolens ATCC 49726]
gi|304567200|gb|EFM42811.1| ATP-dependent Clp protease ATP-binding subunit ClpC
[Corynebacterium accolens ATCC 49726]
Length = 958
Score = 757 bits (1955), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/674 (55%), Positives = 518/674 (76%), Gaps = 17/674 (2%)
Query: 24 TLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGL 83
L+++G NLT+ A++GKLDPVVGR+ ++ER++Q+L RRTKNNP LIGEPGVGKTA+ EGL
Sbjct: 190 VLDQFGRNLTQAAKDGKLDPVVGRESEVERIMQVLSRRTKNNPVLIGEPGVGKTAVVEGL 249
Query: 84 AQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEV 143
A I +G VP+T++ K++ +LD+G LVAG++YRG+FEERLKK+++EI Q +IILFIDE+
Sbjct: 250 ALDIVNGKVPETLKDKQLYSLDLGSLVAGSRYRGDFEERLKKVLKEINQRGDIILFIDEI 309
Query: 144 HTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPE 203
HTL+GAGAAEGAIDAA++LKP LARGELQ IGATTLDEYRKHIEKD ALERRFQPV+V E
Sbjct: 310 HTLVGAGAAEGAIDAASLLKPKLARGELQTIGATTLDEYRKHIEKDAALERRFQPVQVDE 369
Query: 204 PSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSR 263
PS+D+T ILKGLR++YE HH++ YTDEAL +AAQL+ +YI+DRFLPDKA+DL+DEAG+R
Sbjct: 370 PSLDDTFLILKGLRDKYEAHHRVSYTDEALHAAAQLADRYINDRFLPDKAVDLLDEAGAR 429
Query: 264 VRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGK 323
+R++ P+ RE++ + ++ +EK A+ QDFEKA LRD E L G+
Sbjct: 430 MRIKRMTAPKGLREVDDRIAEVRREKEAAIDAQDFEKAASLRDDERKL----------GE 479
Query: 324 EMSKAETE--AGDVGPV--VTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVI 379
E S+ E + +GD+ + V E I +++ WTGIPV K++ ES RLL MEE LHKR+I
Sbjct: 480 ERSEKEKQWRSGDLEEIAEVGEDQIAEVLAHWTGIPVLKLTEKESSRLLNMEEELHKRII 539
Query: 380 GQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIR 439
GQDEAVK++SRAIRR R GLK+P RP SFIF+GP+GVGK+EL+K+LA + FGS++ +I+
Sbjct: 540 GQDEAVKSVSRAIRRTRAGLKDPRRPSGSFIFAGPSGVGKTELSKSLANFLFGSDDDLIQ 599
Query: 440 LDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMML 499
+DM EF +R T S+L G+PPGYVGY EGGQLTE VRR+P++VVLFDEIEKAH +++N +L
Sbjct: 600 IDMGEFHDRFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHKEIYNTLL 659
Query: 500 QILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFD-LDYDEKDSSYNRIKS 558
Q+LEDGRLTD +GR VDFKNT+LI TSN+G+ I K +GF ++ D+ Y R+K+
Sbjct: 660 QVLEDGRLTDGQGRVVDFKNTVLIFTSNLGTQDISK-PVGLGFTGASENDSDAQYERMKA 718
Query: 559 LVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERF 618
V +ELK++FRPEFLNR+D+++VF QLT+ ++ ++ ++++ V +L+ +D+ +++T++
Sbjct: 719 KVNDELKKHFRPEFLNRIDDVVVFHQLTREQIVQMVNLLIDRVGTQLEERDMGIELTDKA 778
Query: 619 RERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDS-DGNVTVLN 677
+ + + G++P GARPLRR I R +ED ++EK+L EI G+ + VDV+ DG +
Sbjct: 779 QNLLAQRGFDPVLGARPLRRTIQRDIEDQLSEKILFGEIGAGEIISVDVEGWDGESKDDS 838
Query: 678 GSSGAPESLADPLP 691
G++ PLP
Sbjct: 839 GATFTFTPRPKPLP 852
>gi|339633595|ref|YP_004725237.1| ATP-dependent protease ATP-binding subunit CLPC1 [Mycobacterium
africanum GM041182]
gi|339332951|emb|CCC28678.1| putative ATP-dependent protease ATP-binding subunit CLPC1
[Mycobacterium africanum GM041182]
Length = 848
Score = 757 bits (1955), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/649 (58%), Positives = 502/649 (77%), Gaps = 15/649 (2%)
Query: 24 TLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGL 83
L+++G NLT A EGKLDPV+GR +IERV+Q+L RRTKNNP LIGEPGVGKTA+ EGL
Sbjct: 170 VLDQFGRNLTAAAMEGKLDPVIGRGKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGL 229
Query: 84 AQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEV 143
AQ I G+VP+T++ K++ TLD+G LVAG++YRG+FEERLKK+++EI +IILFIDE+
Sbjct: 230 AQAIVHGEVPETLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDEL 289
Query: 144 HTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPE 203
HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEYRK+IEKD ALERRFQPV+V E
Sbjct: 290 HTLVGAGAAEGAIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGE 349
Query: 204 PSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSR 263
P+V+ TI+ILKGLR+RYE HH++ TD A+V+AA L+ +YI+DRFLPDKAIDLIDEAG+R
Sbjct: 350 PTVEHTIEILKGLRDRYEAHHRVSITDAAMVAAATLADRYINDRFLPDKAIDLIDEAGAR 409
Query: 264 VRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGK 323
+R+R P + RE ++++ + +EK A+ QDFEKA LRDRE L AQ +
Sbjct: 410 MRIRRMTAPPDLREFDEKIAEARREKESAIDAQDFEKAASLRDREKTLVAQ--------R 461
Query: 324 EMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIG 380
+ + +GD+ VV EVD I ++ WTGIPV K++ E+ RLL+MEE LHKR+IG
Sbjct: 462 AEREKQWRSGDL-DVVAEVDDEQIAEVLGNWTGIPVFKLTEAETTRLLRMEEELHKRIIG 520
Query: 381 QDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRL 440
Q++AVKA+S+AIRR R GLK+P RP SFIF+GP+GVGK+EL+KALA + FG ++A+I++
Sbjct: 521 QEDAVKAVSKAIRRTRAGLKDPKRPSGSFIFAGPSGVGKTELSKALANFLFGDDDALIQI 580
Query: 441 DMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQ 500
DM EF +R T S+L G+PPGYVGY EGGQLTE VRR+P++VVLFDEIEKAH +++N +LQ
Sbjct: 581 DMGEFHDRFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNSLLQ 640
Query: 501 ILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLV 560
+LEDGRLTD +GRTVDFKNT+LI TSN+G+S I K +G ++ Y R+K V
Sbjct: 641 VLEDGRLTDGQGRTVDFKNTVLIFTSNLGTSDISKP---VGLGFSKGGGENDYERMKQKV 697
Query: 561 TEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRE 620
+ELK++FRPEFLNR+D++IVF QLT+ E+ + D+M+ V +LK+KD+ L +T+ +
Sbjct: 698 NDELKKHFRPEFLNRIDDIIVFHQLTREEIIRMVDLMISRVAGQLKSKDMALVLTDAAKA 757
Query: 621 RVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDS 669
+ + G++P GARPLRR I R +ED ++EK+L E+ G V VDVD+
Sbjct: 758 LLAKRGFDPVLGARPLRRTIQREIEDQLSEKILFEEVGPGQVVTVDVDN 806
>gi|381398100|ref|ZP_09923508.1| ATPase AAA-2 domain protein [Microbacterium laevaniformans OR221]
gi|380774766|gb|EIC08062.1| ATPase AAA-2 domain protein [Microbacterium laevaniformans OR221]
Length = 841
Score = 757 bits (1954), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/689 (55%), Positives = 517/689 (75%), Gaps = 27/689 (3%)
Query: 3 GESTEAVGAGVG--------GGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERV 54
G+ V AG G GGS+ L+++G NLT+ A + KLDPV+GR+ +IERV
Sbjct: 147 GKEPAGVAAGAGEQNQQAAQGGSA-----VLDQFGRNLTQAARDNKLDPVIGREKEIERV 201
Query: 55 VQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTK 114
+QIL RR+KNNP LIGEPGVGKTA+ EGLAQ I DVP+T++ K+V +LD+G L+AG++
Sbjct: 202 MQILSRRSKNNPVLIGEPGVGKTAVVEGLAQAIVKNDVPETLKDKQVYSLDLGSLIAGSR 261
Query: 115 YRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCI 174
YRG+FEERLKK+ +EI+ +II+FIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ I
Sbjct: 262 YRGDFEERLKKVTKEIRTRGDIIVFIDEIHTLVGAGAAEGAIDAASILKPLLARGELQTI 321
Query: 175 GATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALV 234
GATTLDEYRKH EKD ALERRFQP++V EPS+ I ILKGLR+RYE HHK++ TD A+V
Sbjct: 322 GATTLDEYRKHFEKDAALERRFQPIQVAEPSLPHAINILKGLRDRYEAHHKVQITDGAIV 381
Query: 235 SAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVR 294
+AA L+ +YISDRFLPDKAIDLIDEAG+R+RL P E RE ++++ ++ ++K A
Sbjct: 382 AAANLADRYISDRFLPDKAIDLIDEAGARLRLSILSSPPELREFDEKIAKVREDKETASE 441
Query: 295 GQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVG--PVVTEVDIQHIVSAWT 352
QDFEKA LRD E L A+ L + + +GDV VV E I +++ T
Sbjct: 442 EQDFEKAAALRDEEKSLLAERLRL--------EKQWRSGDVASHAVVDEGLIAEVLAQAT 493
Query: 353 GIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFS 412
GIPV K++ +E+ RL+ ME+ LH+RVIGQ+EA+ A+SR IRR R GLK+P RP SFIF+
Sbjct: 494 GIPVFKLTEEETSRLVFMEKALHQRVIGQEEAIAALSRTIRRQRAGLKDPKRPSGSFIFA 553
Query: 413 GPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTE 472
GPTGVGK+ELAKALA + F E A+I LDMSEF E+HTVS+L G+PPG+VG+ EGGQLTE
Sbjct: 554 GPTGVGKTELAKALAEFLFDDEGALISLDMSEFGEKHTVSRLFGAPPGFVGFEEGGQLTE 613
Query: 473 AVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSV 532
VRR+P++VVLFDEIEKAHPD+FN +LQILE+GRLTD +GR VDFKNT++IMT+N+GSS
Sbjct: 614 KVRRKPFSVVLFDEIEKAHPDIFNSLLQILEEGRLTDGQGRVVDFKNTVIIMTTNLGSSA 673
Query: 533 IEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKE 592
I G +GF ++ + + ++Y R+K V EELK++F+PEFLNR+D++IVF QL K E+++
Sbjct: 674 I--AGGPVGFQVEGNSQ-TTYERMKGKVDEELKRHFKPEFLNRVDDVIVFPQLNKQELRQ 730
Query: 593 IADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKM 652
I + K + +RL +D+ +++T+ ++R++E G++P+ GARPLRRA+ R +ED ++E++
Sbjct: 731 IVGLFTKRLSERLLDRDMTVELTDAAKDRLIEIGFDPTLGARPLRRAMQREVEDQLSERI 790
Query: 653 LAREIKEGDSVIVDVDSDGNVTVLNGSSG 681
L E+ GD V VD + +G +G G
Sbjct: 791 LHGELNPGDHVKVDAE-NGTFLFEHGPRG 818
>gi|297171206|gb|ADI22214.1| hypothetical protein [uncultured Gemmatimonadales bacterium
HF0200_34B24]
gi|297171322|gb|ADI22327.1| hypothetical protein [uncultured actinobacterium HF0500_01C15]
Length = 826
Score = 756 bits (1953), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 376/666 (56%), Positives = 501/666 (75%), Gaps = 10/666 (1%)
Query: 16 GSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVG 75
G +K P L+ + +LT+LA + KLDP +GR +IERVV+IL RR KNNP LIGEPGVG
Sbjct: 167 GDKKSKTPALDHFCRDLTELAHKDKLDPTIGRVEEIERVVEILCRRKKNNPVLIGEPGVG 226
Query: 76 KTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDE 135
KTAI EGLAQ IA G+V + ++G +V+ LDM ++AGTKYRG+FEERLK +M EI +S
Sbjct: 227 KTAIVEGLAQLIADGEVTEFLKGYRVLALDMAAVIAGTKYRGQFEERLKAVMNEIHESQT 286
Query: 136 IILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERR 195
+ILFIDE+HTL+GAGAAEGAIDA+N+LKP+LARGELQCIGA+TL+EYRK+IEKD ALERR
Sbjct: 287 VILFIDELHTLVGAGAAEGAIDASNMLKPALARGELQCIGASTLNEYRKYIEKDGALERR 346
Query: 196 FQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAID 255
FQPV V P+V+ET++ILKGLR +YE HH++ D+AL AA+L+ +YI+DRFLPDKAID
Sbjct: 347 FQPVIVEPPAVEETLEILKGLRGQYEDHHRVIIPDDALQHAAKLADRYITDRFLPDKAID 406
Query: 256 LIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQI 315
+IDEAG+R R+ P E EL+ +L +I K EA+ QDFE+A ELRD E + I
Sbjct: 407 VIDEAGARARIASQVPPPEVEELKDQLSEIAARKEEAIGDQDFERAAELRDEEREFGQAI 466
Query: 316 SALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLH 375
D +E K P ++E ++ IVS WTG+PV ++ ESDRL+ ME+ LH
Sbjct: 467 QERRDAWEEERKKHR------PEISEDEVAFIVSRWTGVPVTRIRQTESDRLVHMEDELH 520
Query: 376 KRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEE 435
KR++GQ++A++AISRAIRR+R GLK+P RPI SFIFSGPTGVGK+ELA+ALA + F E
Sbjct: 521 KRIVGQNDAIEAISRAIRRSRAGLKDPRRPIGSFIFSGPTGVGKTELARALAEFLFADRE 580
Query: 436 AMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVF 495
A++R+DMSE+ME+ +VS+LIG+PPGYVGY + G LT+AVRRRPY+VVL DEIEKAHPDVF
Sbjct: 581 ALVRVDMSEYMEKFSVSRLIGAPPGYVGYEDSGALTKAVRRRPYSVVLLDEIEKAHPDVF 640
Query: 496 NMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNR 555
N++LQ+L++G LTD+ GR +DFKNT+LIMTSN+G+ I KG G + SY+
Sbjct: 641 NILLQVLDEGHLTDNYGRVIDFKNTVLIMTSNLGARDISKGS---GLGFQSGDPQDSYHI 697
Query: 556 IKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVT 615
+K V +E+++ F PEFLNR+D+ IVF LTK E+ +I I++++V RLK ++I L +T
Sbjct: 698 MKDKVAQEIERAFNPEFLNRVDDTIVFHSLTKEEIGQIVHILMEDVRTRLKEEEISLTLT 757
Query: 616 ERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDG-NVT 674
+ E +VEEGY+ +GARPLRRAI R LED ++EK+L + GD + VD++ +G +T
Sbjct: 758 DAAIEFLVEEGYDEKFGARPLRRAIQRFLEDPLSEKILLADFSRGDEIEVDLNEEGRGLT 817
Query: 675 VLNGSS 680
+ GS+
Sbjct: 818 LQVGSA 823
>gi|227502079|ref|ZP_03932128.1| ATPase with chaperone activity, ATP-binding subunit, partial
[Corynebacterium accolens ATCC 49725]
gi|227077234|gb|EEI15197.1| ATPase with chaperone activity, ATP-binding subunit
[Corynebacterium accolens ATCC 49725]
Length = 953
Score = 756 bits (1953), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/673 (55%), Positives = 518/673 (76%), Gaps = 17/673 (2%)
Query: 25 LEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLA 84
L+++G NLT+ A++GKLDPVVGR+ ++ER++Q+L RRTKNNP LIGEPGVGKTA+ EGLA
Sbjct: 191 LDQFGRNLTQAAKDGKLDPVVGRESEVERIMQVLSRRTKNNPVLIGEPGVGKTAVVEGLA 250
Query: 85 QRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVH 144
I +G VP+T++ K++ +LD+G LVAG++YRG+FEERLKK+++EI Q +IILFIDE+H
Sbjct: 251 LDIVNGKVPETLKDKQLYSLDLGSLVAGSRYRGDFEERLKKVLKEINQRGDIILFIDEIH 310
Query: 145 TLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEP 204
TL+GAGAAEGAIDAA++LKP LARGELQ IGATTLDEYRKHIEKD ALERRFQPV+V EP
Sbjct: 311 TLVGAGAAEGAIDAASLLKPKLARGELQTIGATTLDEYRKHIEKDAALERRFQPVQVDEP 370
Query: 205 SVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRV 264
S+D+T ILKGLR++YE HH++ YTDEAL +AAQL+ +YI+DRFLPDKA+DL+DEAG+R+
Sbjct: 371 SLDDTFLILKGLRDKYEAHHRVSYTDEALHAAAQLADRYINDRFLPDKAVDLLDEAGARM 430
Query: 265 RLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKE 324
R++ P+ RE++ + ++ +EK A+ QDFEKA LRD E L G+E
Sbjct: 431 RIKRMTAPKGLREVDDRIAEVRREKEAAIDAQDFEKAAGLRDDERKL----------GEE 480
Query: 325 MSKAETE--AGDVGPV--VTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIG 380
S+ E + +GD+ + V E I +++ WTGIPV K++ ES RLL MEE LHKR+IG
Sbjct: 481 RSEKEKQWRSGDLEEIAEVGEDQIAEVLAHWTGIPVLKLTEKESSRLLNMEEELHKRIIG 540
Query: 381 QDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRL 440
QDEAVK++SRAIRR R GLK+P RP SFIF+GP+GVGK+EL+K+LA + FGS++ +I++
Sbjct: 541 QDEAVKSVSRAIRRTRAGLKDPRRPSGSFIFAGPSGVGKTELSKSLANFLFGSDDDLIQI 600
Query: 441 DMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQ 500
DM EF +R T S+L G+PPGYVGY EGGQLTE VRR+P++VVLFDEIEKAH +++N +LQ
Sbjct: 601 DMGEFHDRFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHKEIYNTLLQ 660
Query: 501 ILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFD-LDYDEKDSSYNRIKSL 559
+LEDGRLTD +GR VDFKNT+LI TSN+G+ I K +GF ++ D+ Y R+K+
Sbjct: 661 VLEDGRLTDGQGRVVDFKNTVLIFTSNLGTQDISK-PVGLGFTGASENDSDAQYERMKAK 719
Query: 560 VTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFR 619
V +ELK++FRPEFLNR+D+++VF QLT+ ++ ++ ++++ V +L+ +D+ +++T++ +
Sbjct: 720 VNDELKKHFRPEFLNRIDDVVVFHQLTREQIVQMVNLLIDRVGTQLEERDMGIELTDKAQ 779
Query: 620 ERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDS-DGNVTVLNG 678
+ + G++P GARPLRR I R +ED ++EK+L EI G+ + VDV+ DG +G
Sbjct: 780 NLLAQRGFDPVLGARPLRRTIQRDIEDQLSEKILFGEIGAGEIISVDVEGWDGESKDDSG 839
Query: 679 SSGAPESLADPLP 691
++ PLP
Sbjct: 840 ATFTFTPRPKPLP 852
>gi|145222022|ref|YP_001132700.1| ATPase [Mycobacterium gilvum PYR-GCK]
gi|145214508|gb|ABP43912.1| ATPase AAA-2 domain protein [Mycobacterium gilvum PYR-GCK]
Length = 847
Score = 756 bits (1953), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 376/649 (57%), Positives = 504/649 (77%), Gaps = 15/649 (2%)
Query: 24 TLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGL 83
L+++G NLT A EGKLDPV+GR+ +IERV+Q+L RRTKNNP LIGEPGVGKTA+ EGL
Sbjct: 170 VLDQFGRNLTAAAMEGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGL 229
Query: 84 AQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEV 143
AQ I GDVP+T++ K++ TLD+G LVAG++YRG+FEERLKK+++EI +IILFIDE+
Sbjct: 230 AQAIVHGDVPETLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDEL 289
Query: 144 HTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPE 203
HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEYRK+IEKD ALERRFQPV+V E
Sbjct: 290 HTLVGAGAAEGAIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGE 349
Query: 204 PSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSR 263
P+V TI+ILKGLR+RYE HH++ TD A+ +AA L+ +YI+DRFLPDKAIDLIDEAG+R
Sbjct: 350 PTVAHTIEILKGLRDRYEAHHRVSITDGAIAAAATLADRYINDRFLPDKAIDLIDEAGAR 409
Query: 264 VRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGK 323
+R+R P + RE ++++ +EK A+ QDFEKA LRD+E L AQ +
Sbjct: 410 MRIRRMTAPPDLREFDEKIADARREKESAIDAQDFEKAASLRDKEKQLVAQ--------R 461
Query: 324 EMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIG 380
+ + +GD+ VV EVD I ++ WTGIPV K++ +E+ RLL+ME+ LHKR+IG
Sbjct: 462 AEREKQWRSGDL-DVVAEVDDEQIAEVLGNWTGIPVFKLTEEETTRLLRMEDELHKRIIG 520
Query: 381 QDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRL 440
Q++AVKA+S+AIRR R GLK+P RP SFIF+GP+GVGK+EL+KALA + FG ++A+I++
Sbjct: 521 QEDAVKAVSKAIRRTRAGLKDPKRPSGSFIFAGPSGVGKTELSKALANFLFGDDDALIQI 580
Query: 441 DMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQ 500
DM EF +R T S+L G+PPGYVGY EGGQLTE VRR+P++VVLFDEIEKAH +++N +LQ
Sbjct: 581 DMGEFHDRFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNSLLQ 640
Query: 501 ILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLV 560
+LEDGRLTD +GRTVDFKNT+LI TSN+G+S I K +G +++Y R+K V
Sbjct: 641 VLEDGRLTDGQGRTVDFKNTVLIFTSNLGTSDISKA---VGLGFTQGGGENNYERMKQKV 697
Query: 561 TEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRE 620
+ELK++FRPEFLNR+D++IVF QLT+ E+ ++ D+M+ V ++LK KD+ +++T + +
Sbjct: 698 HDELKKHFRPEFLNRIDDIIVFHQLTQDEIIQMVDLMIGRVGNQLKAKDMAMELTPKAKA 757
Query: 621 RVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDS 669
+ + G++P GARPLRR I R +ED ++EK+L E+ G V VDV++
Sbjct: 758 LLAKRGFDPVLGARPLRRTIQREIEDQLSEKILFEELGPGQLVTVDVEN 806
>gi|415728266|ref|ZP_11471839.1| ATPase AAA-2 domain protein [Gardnerella vaginalis 6119V5]
gi|388065404|gb|EIK87895.1| ATPase AAA-2 domain protein [Gardnerella vaginalis 6119V5]
Length = 882
Score = 756 bits (1953), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/669 (56%), Positives = 513/669 (76%), Gaps = 9/669 (1%)
Query: 4 ESTEAVGAG-VGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRT 62
E E AG V S+ + L+++G NLT A EGKLDPV+GR +IERV+ IL RRT
Sbjct: 153 EKGELANAGSVQDKSNKSGSALLDQFGRNLTLEAREGKLDPVIGRSEEIERVMVILSRRT 212
Query: 63 KNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEER 122
KNNP LIG+PGVGKTA+ EGLAQ+I GDVP+T++ K++ +LD+G ++AG++YRG+FEER
Sbjct: 213 KNNPVLIGDPGVGKTAVVEGLAQKIVEGDVPETLKNKQIYSLDLGSMIAGSRYRGDFEER 272
Query: 123 LKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEY 182
LKK+++EIK +++LFIDE+HT++GAG+A+GA+ A+++LKP LARGELQ IGATT DEY
Sbjct: 273 LKKVLKEIKTRGDVVLFIDEIHTIVGAGSADGALGASDMLKPMLARGELQTIGATTTDEY 332
Query: 183 RKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQ 242
RK+IEKD ALERRFQP++VPEP++ ETI+ILKGLR RYE HH + TD AL S+A+LS +
Sbjct: 333 RKYIEKDAALERRFQPIQVPEPTIAETIEILKGLRSRYENHHHVTITDGALQSSAELSDR 392
Query: 243 YISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAG 302
YI DR LPDKAIDLIDEAG+R+R++ P E +EL ++ +I+++K+EA++ QDFE+A
Sbjct: 393 YIQDRHLPDKAIDLIDEAGARLRIKRLTQPPELKELNHKIAKISEKKDEAIKQQDFEEAA 452
Query: 303 ELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTD 362
LRD + L+ + + KE + E E+ +V VV E I +VS+ TGIPV K++
Sbjct: 453 NLRDDQEKLENEAAE-----KEKAWREGES-NVKMVVDEDMIASVVSSTTGIPVVKLTQA 506
Query: 363 ESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSEL 422
ES +LL+ME LHKR++GQDEAV A++R+IRRARVGLK+P RP SFIF+GPTGVGK+EL
Sbjct: 507 ESQKLLQMESELHKRIVGQDEAVSALARSIRRARVGLKDPKRPSGSFIFAGPTGVGKTEL 566
Query: 423 AKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVV 482
AKALA + F ++A+IR+DMSEF E++ S+L G+PPGYVGY EGG+LTE VRR+P++VV
Sbjct: 567 AKALANFLFDDDDALIRVDMSEFAEKYAASRLFGAPPGYVGYEEGGELTEKVRRKPFSVV 626
Query: 483 LFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGF 542
LFDEIEKAHPD+FN +LQ+L+DG LTD +GR VDFKNT++I+T+N+G+ I K GF
Sbjct: 627 LFDEIEKAHPDIFNTLLQVLDDGHLTDGQGRKVDFKNTIIILTTNLGTRDIAKAA-NTGF 685
Query: 543 DLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVF 602
L + DS+Y R+K V ELK+ FRPEFLNRLD+ IVFRQLT+ EV++I D+ +K +
Sbjct: 686 TLG-NSSDSTYQRMKDQVNSELKRQFRPEFLNRLDDTIVFRQLTEPEVRQIVDMDIKLLN 744
Query: 603 DRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDS 662
+RL + L++T+ + + ++G+NP GARPLRR I R +ED ++EK+L EI +G+
Sbjct: 745 NRLFDHHMSLELTDAAKNLLAQKGFNPLLGARPLRRVIQRDIEDIISEKILLNEISDGER 804
Query: 663 VIVDVDSDG 671
+ VD + +G
Sbjct: 805 IEVDAEGEG 813
>gi|298527075|ref|ZP_07014484.1| conserved hypothetical protein [Mycobacterium tuberculosis
94_M4241A]
gi|298496869|gb|EFI32163.1| conserved hypothetical protein [Mycobacterium tuberculosis
94_M4241A]
Length = 848
Score = 756 bits (1952), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 383/664 (57%), Positives = 508/664 (76%), Gaps = 16/664 (2%)
Query: 24 TLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGL 83
L+++G NLT A EGKLDPV+GR+ +IERV+Q+L RRTKNNP LIGEPGVGKTA+ EGL
Sbjct: 170 VLDQFGRNLTAAAMEGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGL 229
Query: 84 AQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEV 143
AQ I G+VP+T++ K++ TLD+G LVAG++YRG+FEERLKK+++EI +IILFIDE+
Sbjct: 230 AQAIVHGEVPETLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDEL 289
Query: 144 HTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPE 203
HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEYRK+IEKD ALERRFQPV+V E
Sbjct: 290 HTLVGAGAAEGAIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGE 349
Query: 204 PSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSR 263
P+V+ TI+ILKGLR+RYE HH++ TD A+V+AA L+ +YI+DRFLPDKAIDLIDEAG+R
Sbjct: 350 PTVEHTIEILKGLRDRYEAHHRVSITDAAMVAAATLADRYINDRFLPDKAIDLIDEAGAR 409
Query: 264 VRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGK 323
+R+R P + RE ++++ + +EK A+ QDFEKA LRDRE L AQ +
Sbjct: 410 MRIRRMTAPPDLREFDEKIAEARREKESAIDAQDFEKAASLRDREKTLVAQ--------R 461
Query: 324 EMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIG 380
+ + +GD+ VV EVD I ++ WTGIPV K++ E+ RLL+MEE LHKR+IG
Sbjct: 462 AEREKQWRSGDL-DVVAEVDDEQIAEVLGNWTGIPVFKLTEAETTRLLRMEEELHKRIIG 520
Query: 381 QDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRL 440
Q++AVKA+S+AIRR R GLK+P RP SFIF+GP+GVGK+EL+KALA + FG ++A+I++
Sbjct: 521 QEDAVKAVSKAIRRTRAGLKDPKRPSGSFIFAGPSGVGKTELSKALANFLFGDDDALIQI 580
Query: 441 DMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQ 500
DM EF +R T S+L G+PPGYVGY EGGQLTE VRR+P++VVLFDEIEKAH +++N +LQ
Sbjct: 581 DMGEFHDRFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNSLLQ 640
Query: 501 ILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLV 560
+LEDGRLTD +GRTVDFKNT+LI TSN+G+S I K +G ++ Y R+K V
Sbjct: 641 VLEDGRLTDGQGRTVDFKNTVLIFTSNLGTSDISKP---VGLGFSKGGGENDYERMKQKV 697
Query: 561 TEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRE 620
+ELK++FRPEFLNR+D++IVF QLT+ E+ + D+M+ V +LK+KD+ L +T+ +
Sbjct: 698 NDELKKHFRPEFLNRIDDIIVFHQLTREEIIRMVDLMISRVAGQLKSKDMALVLTDAAKA 757
Query: 621 RVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDV-DSDGNVTVLNGS 679
+ + G++P GARPLRR I R +ED ++EK+L E+ G V VDV + DG +
Sbjct: 758 LLAKRGFDPVLGARPLRRTIQREIEDQLSEKILFEEVGPGQVVTVDVYNWDGEGPGEDAC 817
Query: 680 SGAP 683
S +P
Sbjct: 818 SPSP 821
>gi|115458130|ref|NP_001052665.1| Os04g0397100 [Oryza sativa Japonica Group]
gi|113564236|dbj|BAF14579.1| Os04g0397100, partial [Oryza sativa Japonica Group]
Length = 403
Score = 756 bits (1951), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 369/403 (91%), Positives = 388/403 (96%)
Query: 290 NEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVS 349
NEAVRGQDFEKAGELRDREM+LKAQI+A++DK KEM KAETE+G+VGP+VTE DIQHIVS
Sbjct: 1 NEAVRGQDFEKAGELRDREMELKAQITAIIDKSKEMVKAETESGEVGPLVTEADIQHIVS 60
Query: 350 AWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASF 409
+WTGIPVEKVS+DESDRLLKMEETLH R+IGQDEAVKAISRAIRRARVGLKNPNRPIASF
Sbjct: 61 SWTGIPVEKVSSDESDRLLKMEETLHTRIIGQDEAVKAISRAIRRARVGLKNPNRPIASF 120
Query: 410 IFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQ 469
IFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQ
Sbjct: 121 IFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQ 180
Query: 470 LTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVG 529
LTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVG
Sbjct: 181 LTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVG 240
Query: 530 SSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLE 589
SSVIEKGGR+IGFDLDYDEKD+SYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLE
Sbjct: 241 SSVIEKGGRKIGFDLDYDEKDTSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLE 300
Query: 590 VKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMA 649
VKEIADIMLKEVFDRLK KDI+LQVTE+FR+RVV+EGYNPSYGARPLRRAIMRLLEDS+A
Sbjct: 301 VKEIADIMLKEVFDRLKAKDIDLQVTEKFRDRVVDEGYNPSYGARPLRRAIMRLLEDSLA 360
Query: 650 EKMLAREIKEGDSVIVDVDSDGNVTVLNGSSGAPESLADPLPV 692
EKMLA E+KEGDS IVDVDS+G V VLNG SG PE LA L V
Sbjct: 361 EKMLAGEVKEGDSAIVDVDSEGKVIVLNGGSGVPEPLAPALSV 403
>gi|404443896|ref|ZP_11009061.1| ATPase [Mycobacterium vaccae ATCC 25954]
gi|403654831|gb|EJZ09729.1| ATPase [Mycobacterium vaccae ATCC 25954]
Length = 847
Score = 756 bits (1951), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/648 (57%), Positives = 505/648 (77%), Gaps = 15/648 (2%)
Query: 25 LEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLA 84
L+++G NLT A EGKLDPV+GR+ +IERV+Q+L RRTKNNP LIGEPGVGKTA+ EGLA
Sbjct: 171 LDQFGRNLTAAAMEGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLA 230
Query: 85 QRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVH 144
Q I GDVP+T++ K++ TLD+G LVAG++YRG+FEERLKK+++EI +IILFIDE+H
Sbjct: 231 QAIVHGDVPETLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDELH 290
Query: 145 TLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEP 204
TL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEYRK+IEKD ALERRFQPV+V EP
Sbjct: 291 TLVGAGAAEGAIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEP 350
Query: 205 SVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRV 264
+V+ TI+ILKGLR+RYE HH++ TD A+ +AA L+ +YI+DRFLPDKAIDLIDEAG+R+
Sbjct: 351 TVEHTIEILKGLRDRYEAHHRVSITDGAIAAAATLADRYINDRFLPDKAIDLIDEAGARM 410
Query: 265 RLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKE 324
R+R P + RE ++++ +EK A+ QDFEKA LRD+E L AQ +
Sbjct: 411 RIRRMTAPPDLREFDEKIADARREKESAIDAQDFEKAASLRDKEKTLVAQ--------RA 462
Query: 325 MSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQ 381
+ + +GD+ VV EVD I ++ WTGIPV K++ +E+ RLL+ME+ LHKR+IGQ
Sbjct: 463 EREKQWRSGDL-DVVAEVDDEQIAEVLGNWTGIPVFKLTEEETTRLLRMEDELHKRIIGQ 521
Query: 382 DEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLD 441
++AVKA+S+AIRR R GLK+P RP SFIF+GP+GVGK+EL+KALA + FG ++A+I++D
Sbjct: 522 EDAVKAVSKAIRRTRAGLKDPKRPSGSFIFAGPSGVGKTELSKALANFLFGDDDALIQID 581
Query: 442 MSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQI 501
M EF +R T S+L G+PPGYVGY EGGQLTE VRR+P++VVLFDEIEKAH +++N +LQ+
Sbjct: 582 MGEFHDRFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNSLLQV 641
Query: 502 LEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVT 561
LEDGRLTD +GRTVDFKNT+LI TSN+G+S I K +G +++Y R+K V
Sbjct: 642 LEDGRLTDGQGRTVDFKNTVLIFTSNLGTSDISKA---VGLGFTQGGGENNYERMKQKVH 698
Query: 562 EELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRER 621
+ELK++FRPEFLNR+D++IVF QLT+ E+ ++ D+M+ V +L KD+ +++T++ +
Sbjct: 699 DELKKHFRPEFLNRIDDIIVFHQLTQDEIIKMVDLMIGRVSKQLAAKDMTMELTDKAKSL 758
Query: 622 VVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDS 669
+ + G++P GARPLRR I R +ED+++EK+L E+ G V VDV++
Sbjct: 759 LAKRGFDPVLGARPLRRTIQREIEDALSEKILFEEVGPGQLVTVDVEN 806
>gi|336392462|ref|ZP_08573861.1| ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones
[Lactobacillus coryniformis subsp. torquens KCTC 3535]
Length = 830
Score = 756 bits (1951), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/661 (56%), Positives = 497/661 (75%), Gaps = 10/661 (1%)
Query: 15 GGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGV 74
G +S PTL+ +LT+LA E ++DPVVGR ++ R++Q+L RRTKNNP LIGEPGV
Sbjct: 165 GNNSSEGTPTLDSLARDLTQLARENQMDPVVGRSKEVRRLIQVLSRRTKNNPVLIGEPGV 224
Query: 75 GKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSD 134
GKTAIAEGLAQ+I +GDVPD + K+++ LDMG LVAGTKYRGEFE+RLKK+++EI +
Sbjct: 225 GKTAIAEGLAQKIIAGDVPDDMAKKRLMMLDMGSLVAGTKYRGEFEDRLKKVIDEIYKDG 284
Query: 135 EIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALER 194
+ILFIDE+HTLIGAG AEGAIDA+NILKP+LARGE+Q IGATTLDEY+K+IEKD ALER
Sbjct: 285 HVILFIDELHTLIGAGGAEGAIDASNILKPALARGEMQVIGATTLDEYQKYIEKDAALER 344
Query: 195 RFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAI 254
RF ++V EP+ E +IL GLR RYE HH + TDEA+ A LS +YISDRFLPDKAI
Sbjct: 345 RFATIQVNEPTQAEAEEILLGLRSRYEEHHGVTITDEAVHEAVVLSSRYISDRFLPDKAI 404
Query: 255 DLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQ 314
DLIDE+ + VRL A +LE EL Q+ K+K A+ QDFEKA +R+ EM LK +
Sbjct: 405 DLIDESAASVRLDAASKKTPESKLETELNQLVKDKEAAIEAQDFEKAASIRENEMALKDK 464
Query: 315 ISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETL 374
++ E + A T VT DI +VS WTG+P+ ++ E++RL+ +E+ L
Sbjct: 465 LAT------EQAAAPTNGVRKDVKVTPDDIATVVSQWTGVPLTQLQKSETERLINLEKVL 518
Query: 375 HKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSE 434
HKRVIGQ+EAV A+SRAIRRAR GLK+P RPI SF+F GPTGVGK+ELAKALA FGSE
Sbjct: 519 HKRVIGQEEAVSAVSRAIRRARSGLKDPQRPIGSFMFLGPTGVGKTELAKALAEAMFGSE 578
Query: 435 EAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDV 494
+ MIR+DMSE+ME+++ S+L+G+PPGYVGY EGGQLTE VR++PY+VVL DE+EKAHPDV
Sbjct: 579 DNMIRVDMSEYMEKYSTSRLVGAPPGYVGYEEGGQLTEKVRQKPYSVVLLDEVEKAHPDV 638
Query: 495 FNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYN 554
FN++LQ+L+DG LTDSKGR VDF+NT+LIMTSN+G++ + + + +GF ++D Y
Sbjct: 639 FNILLQVLDDGYLTDSKGRRVDFRNTILIMTSNLGATAL-RDEKSVGFGAQKVQQD--YK 695
Query: 555 RIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQV 614
++S + EELK+ FRPEF+NR+DE++VF LTK E+ +I IM K V RL ++I++++
Sbjct: 696 AMRSRILEELKKSFRPEFINRIDEVVVFHSLTKPELHQIVKIMAKNVLKRLHDQNIDVKI 755
Query: 615 TERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVT 674
T + + + G++P YGARP+RRAI + +ED ++E++L+ IK G+SV + G +T
Sbjct: 756 TPAAIDVIAKAGFDPEYGARPIRRAIQQQVEDRLSEELLSGHIKVGESVTIGA-RKGEIT 814
Query: 675 V 675
V
Sbjct: 815 V 815
>gi|323484656|ref|ZP_08090018.1| hypothetical protein HMPREF9474_01769 [Clostridium symbiosum
WAL-14163]
gi|323402039|gb|EGA94375.1| hypothetical protein HMPREF9474_01769 [Clostridium symbiosum
WAL-14163]
Length = 830
Score = 755 bits (1950), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/654 (57%), Positives = 510/654 (77%), Gaps = 10/654 (1%)
Query: 19 GNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTA 78
GN P L+ + +LT+LA+EGKLDPV+GR+ +++RV+QIL RR KNNPCLIGEPGVGKTA
Sbjct: 169 GN-TPNLDSFSRDLTELAKEGKLDPVIGRETEMKRVIQILSRRGKNNPCLIGEPGVGKTA 227
Query: 79 IAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIIL 138
+ EGLAQ I SG+VP+TI K+V++LD+ +VAG+KYRGEFEER+KK++ E+K+ +I+L
Sbjct: 228 VVEGLAQLIISGNVPETIAKKRVVSLDLSGMVAGSKYRGEFEERIKKVLSEVKEDGDILL 287
Query: 139 FIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQP 198
FIDE+HT+IGAG AEGAIDA+NILKPSLARGE+Q IGATT++EYRK+IEKD ALERRFQP
Sbjct: 288 FIDEIHTIIGAGGAEGAIDASNILKPSLARGEIQLIGATTVEEYRKYIEKDAALERRFQP 347
Query: 199 VKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLID 258
V V EPS +++I+IL+GLR RYE HHK+ T+EAL +A +L+ +YI+DRFLPDKAIDLID
Sbjct: 348 VMVEEPSEEDSIEILRGLRSRYEEHHKVTITNEALEAAVKLAARYINDRFLPDKAIDLID 407
Query: 259 EAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISAL 318
EA S++RL PEE + LE++++++ ++K +A++ + +EKAG+++ ++ + +I +
Sbjct: 408 EASSKLRLTVYTEPEEIKVLEEDIKKLERQKEDAIKAEAYEKAGDIKKKQDKKREKIEKI 467
Query: 319 VDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRV 378
DK ++ E VV + +I IVS WT IPV K++ +ES+RLLK+E LH+RV
Sbjct: 468 RDKWQK------EKNSRKLVVGDNEIADIVSDWTRIPVRKLAQEESERLLKLESILHERV 521
Query: 379 IGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMI 438
+GQ+EAV A+S+AIRR RVGLK+P RPI SF+F GPTGVGK+EL+KAL+ FG+E AMI
Sbjct: 522 VGQEEAVTAVSKAIRRGRVGLKDPKRPIGSFLFLGPTGVGKTELSKALSEAMFGTENAMI 581
Query: 439 RLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMM 498
R+DMSE+ME+H+VSK+IGSPPGYVGY EGGQL+E VRR PY+V+LFDEIEKAHPDVFN++
Sbjct: 582 RVDMSEYMEKHSVSKMIGSPPGYVGYEEGGQLSEKVRRNPYSVILFDEIEKAHPDVFNIL 641
Query: 499 LQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKS 558
LQIL+DG +TD++GR +DFKNT+LIMTSN G+ I +R+GF D D K + Y +K+
Sbjct: 642 LQILDDGHITDAQGRKIDFKNTVLIMTSNAGAENI-ISPKRLGFSSDSDAK-TDYEFMKN 699
Query: 559 LVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTK-DIELQVTER 617
V +E+K+ F+PEFLNR+DE++VF L K ++EIA IMLK + R K + + L V +
Sbjct: 700 RVMDEVKRMFKPEFLNRIDEIMVFHPLNKKNIEEIAGIMLKTIIRRTKAQVGMSLTVDDG 759
Query: 618 FRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDG 671
+ E+GY+ YGARPLRR I +ED ++E++L IK+ D V+V D +G
Sbjct: 760 AVAYLAEKGYDEKYGARPLRRTIQNQIEDKLSEELLEGHIKKDDEVLVTRDGEG 813
>gi|282853334|ref|ZP_06262671.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes J139]
gi|386070819|ref|YP_005985715.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes ATCC 11828]
gi|422389730|ref|ZP_16469827.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL103PA1]
gi|422458087|ref|ZP_16534745.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL050PA2]
gi|422463757|ref|ZP_16540370.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL060PA1]
gi|422466893|ref|ZP_16543455.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL110PA4]
gi|422566068|ref|ZP_16641707.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL082PA2]
gi|422576859|ref|ZP_16652396.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL001PA1]
gi|282582787|gb|EFB88167.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes J139]
gi|314922364|gb|EFS86195.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL001PA1]
gi|314965312|gb|EFT09411.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL082PA2]
gi|315091112|gb|EFT63088.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL110PA4]
gi|315094198|gb|EFT66174.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL060PA1]
gi|315104854|gb|EFT76830.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL050PA2]
gi|327329257|gb|EGE71017.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL103PA1]
gi|353455185|gb|AER05704.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes ATCC 11828]
Length = 844
Score = 755 bits (1950), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/673 (56%), Positives = 508/673 (75%), Gaps = 13/673 (1%)
Query: 3 GESTEAVGAGVG-GGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRR 61
G+ +A +G G + L+++G NLT+ A +G+LDPV+GR+ +IERV+ +L RR
Sbjct: 147 GDERQAATSGAPEAGPQQSSATILDQFGRNLTEAARDGELDPVIGREREIERVMVVLSRR 206
Query: 62 TKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEE 121
TKNNP LIGEPGVGK+A EGLAQ I GDVP+T+ KK+ +LD+G +VAG++YRG+FEE
Sbjct: 207 TKNNPVLIGEPGVGKSACVEGLAQAIVRGDVPETLRDKKIYSLDLGSMVAGSRYRGDFEE 266
Query: 122 RLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDE 181
R+KK+++EIK +IILFIDE+HTL+GAGAAEGAIDAA++LKP LARGELQ IGATTLDE
Sbjct: 267 RMKKVLKEIKNRGDIILFIDEIHTLVGAGAAEGAIDAASMLKPMLARGELQTIGATTLDE 326
Query: 182 YRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSY 241
YRK+IEKD ALERRFQP++V EPS+ I+ILKGLR+RYE HHK+ TDEA+ SAA L+
Sbjct: 327 YRKYIEKDAALERRFQPIQVDEPSIPLAIEILKGLRDRYEAHHKITITDEAITSAANLAS 386
Query: 242 QYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKA 301
+YI DRFLPDKAIDLIDEAG+R+ +R P + RE ++ + ++ EK A+ QDFE+A
Sbjct: 387 RYIQDRFLPDKAIDLIDEAGARMNIRRMTAPPDLREFDERIARVRVEKEAAIDAQDFERA 446
Query: 302 GELRDREMDLKAQISALVDKGKEMSKAETEAGD--VGPVVTEVDIQHIVSAWTGIPVEKV 359
LRD E L A+ +E + E + GD V VV +I ++S TGIPV K+
Sbjct: 447 AGLRDDEKKLLAE--------REAKEEEWKQGDESVPAVVGPDEIAEVLSGATGIPVFKL 498
Query: 360 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 419
+ +ES RLL ME+ + KR +GQ++AVKA+ R+IRR R GLK+P RP SFIF+GP+GVGK
Sbjct: 499 TEEESQRLLHMEDEIGKRYVGQEDAVKALCRSIRRTRAGLKDPKRPAGSFIFAGPSGVGK 558
Query: 420 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 479
+EL KAL + FG E+A+I LDMSE+ E+HT S++ GSPPG+VGY EGGQLTE VRR+P+
Sbjct: 559 TELTKALTEFLFGDEDALITLDMSEYSEKHTASRMFGSPPGFVGYEEGGQLTEKVRRKPF 618
Query: 480 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 539
+V+LFDEIEKAHPD+FN +LQIL++GRLTD++GR VDFKNT++++T+N+G+ I K
Sbjct: 619 SVILFDEIEKAHPDIFNSLLQILDEGRLTDAQGRVVDFKNTVIVLTTNLGTRDISK-SVN 677
Query: 540 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 599
+GF D+ +SSY ++K+ VTEELK +FRPEFLNRLDE+IVF QLT+ ++ I D+M+
Sbjct: 678 LGFS-KADDVESSYEKMKAKVTEELKGHFRPEFLNRLDEIIVFHQLTQPDILRIVDLMVG 736
Query: 600 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 659
++ DRL KD+ ++VT +E + + G++P GARPLRR I R +ED +AEK+L E+K
Sbjct: 737 QLEDRLADKDMGIEVTPAAKELLSKRGFDPLLGARPLRRTIQRDIEDVLAEKILFGEVKP 796
Query: 660 GDSVIVDVDSDGN 672
G V+VD +G+
Sbjct: 797 GQIVVVDAAPEGS 809
>gi|333396625|ref|ZP_08478442.1| ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones
[Lactobacillus coryniformis subsp. coryniformis KCTC
3167]
Length = 829
Score = 755 bits (1950), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/660 (56%), Positives = 497/660 (75%), Gaps = 10/660 (1%)
Query: 16 GSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVG 75
G+S PTL+ +LT+LA E ++DPVVGR ++ R++Q+L RRTKNNP LIGEPGVG
Sbjct: 165 GNSSEGTPTLDSLARDLTQLARENQMDPVVGRSKEVRRLIQVLSRRTKNNPVLIGEPGVG 224
Query: 76 KTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDE 135
KTAIAEGLAQ+I +GDVPD + K+++ LDMG LVAGTKYRGEFE+RLKK+++EI +
Sbjct: 225 KTAIAEGLAQKIIAGDVPDDMAKKRLMMLDMGSLVAGTKYRGEFEDRLKKVIDEIYKDGH 284
Query: 136 IILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERR 195
+ILFIDE+HTLIGAG AEGAIDA+NILKP+LARGE+Q IGATTLDEY+K+IEKD ALERR
Sbjct: 285 VILFIDELHTLIGAGGAEGAIDASNILKPALARGEMQVIGATTLDEYQKYIEKDAALERR 344
Query: 196 FQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAID 255
F ++V EP+ E +IL GLR RYE HH + TDEA+ A LS +YISDRFLPDKAID
Sbjct: 345 FATIQVNEPTQAEAEEILLGLRSRYEEHHGVTITDEAVHEAVVLSSRYISDRFLPDKAID 404
Query: 256 LIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQI 315
LIDE+ + VRL A +LE EL Q+ K+K A+ QDFEKA +R+ EM LK ++
Sbjct: 405 LIDESAASVRLDAASKKTPESKLETELNQLVKDKEAAIEAQDFEKAASIRENEMALKDKL 464
Query: 316 SALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLH 375
+ E + A T VT DI +VS WTG+P+ ++ E++RL+ +E+ LH
Sbjct: 465 AT------EQAAAPTNGVRKDVKVTPDDIATVVSQWTGVPLTQLQKSETERLINLEKVLH 518
Query: 376 KRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEE 435
KRVIGQ+EAV A+SRAIRRAR GLK+P RPI SF+F GPTGVGK+ELAKALA FGSE+
Sbjct: 519 KRVIGQEEAVSAVSRAIRRARSGLKDPQRPIGSFMFLGPTGVGKTELAKALAEAMFGSED 578
Query: 436 AMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVF 495
MIR+DMSE+ME+++ S+L+G+PPGYVGY EGGQLTE VR++PY+VVL DE+EKAHPDVF
Sbjct: 579 NMIRVDMSEYMEKYSTSRLVGAPPGYVGYEEGGQLTEKVRQKPYSVVLLDEVEKAHPDVF 638
Query: 496 NMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNR 555
N++LQ+L+DG LTDSKGR VDF+NT+LIMTSN+G++ + + + +GF ++D Y
Sbjct: 639 NILLQVLDDGYLTDSKGRRVDFRNTILIMTSNLGATAL-RDEKSVGFGAQKVQQD--YKA 695
Query: 556 IKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVT 615
++S + EELK+ FRPEF+NR+DE++VF LTK E+ +I IM K V RL ++I++++T
Sbjct: 696 MRSRILEELKKSFRPEFINRIDEVVVFHSLTKPELHQIVKIMAKNVLKRLHDQNIDVKIT 755
Query: 616 ERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTV 675
+ + + G++P YGARP+RRAI + +ED ++E++L+ IK G+SV + G +TV
Sbjct: 756 PAAIDVIAKAGFDPEYGARPIRRAIQQQVEDRLSEELLSGHIKVGESVTIGA-RKGEITV 814
>gi|172041364|ref|YP_001801078.1| ATP-dependent Clp protease [Corynebacterium urealyticum DSM 7109]
gi|448824288|ref|YP_007417457.1| ATP-dependent Clp protease [Corynebacterium urealyticum DSM 7111]
gi|171852668|emb|CAQ05644.1| ATP-dependent Clp protease [Corynebacterium urealyticum DSM 7109]
gi|448277785|gb|AGE37209.1| ATP-dependent Clp protease [Corynebacterium urealyticum DSM 7111]
Length = 894
Score = 755 bits (1950), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 379/665 (56%), Positives = 513/665 (77%), Gaps = 16/665 (2%)
Query: 11 AGVGGGSSGNKMPTL--EEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCL 68
+G GG +G K +L +++G NLT+ A++GKLDPVVGR +IER++Q+L RRTKNNP L
Sbjct: 166 SGQGGAKAGQKSNSLVLDQFGRNLTQAAKDGKLDPVVGRAGEIERIMQVLSRRTKNNPVL 225
Query: 69 IGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLME 128
IGEPGVGKTA+ EGLA I +G VP+T+ K+V +LD+G LVAG++YRG+FEERLKK+++
Sbjct: 226 IGEPGVGKTAVVEGLALDIVNGKVPETLRDKQVYSLDLGSLVAGSRYRGDFEERLKKVLK 285
Query: 129 EIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEK 188
EI Q +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTL+EYRKHIEK
Sbjct: 286 EINQRGDIILFIDEIHTLVGAGAAEGAIDAASILKPKLARGELQTIGATTLEEYRKHIEK 345
Query: 189 DPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRF 248
D ALERRFQPV+VPEPSV +TI+ILKGLR+RYE HH++ TD AL SAA L+ +YI+DRF
Sbjct: 346 DAALERRFQPVQVPEPSVADTIEILKGLRDRYEAHHRVSITDGALRSAATLADRYINDRF 405
Query: 249 LPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDRE 308
LPDKA+DL+DEAG+R+R++ P+ +E++ ++ ++ ++K A+ QDFEKA LRD E
Sbjct: 406 LPDKAVDLLDEAGARMRIKRLTAPKSVQEVDDKIAEVRRKKEAAIDEQDFEKAAALRDDE 465
Query: 309 MDLKAQISALVDKGKEMSKAETEAGDVGPV--VTEVDIQHIVSAWTGIPVEKVSTDESDR 366
L ++ E KA AG++ V V E I +++ WTGIPV K++ +ES R
Sbjct: 466 -------RTLTEERAEKEKA-WRAGELDEVAEVDEEQIAEVLANWTGIPVFKLTEEESSR 517
Query: 367 LLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKAL 426
LL ME LHKR+IGQD+AVKA+SRAIRR R GLK+PNRP SFIF+GP+GVGK+EL+KAL
Sbjct: 518 LLDMEGELHKRIIGQDDAVKAVSRAIRRTRAGLKDPNRPSGSFIFAGPSGVGKTELSKAL 577
Query: 427 AAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDE 486
A + FG ++A+I++DM EF ++ T S+L G+PPGYVGY EGGQLTE VRR+P++VVLFDE
Sbjct: 578 AEFLFGDDDALIQVDMGEFHDKFTASRLFGAPPGYVGYDEGGQLTEKVRRKPFSVVLFDE 637
Query: 487 IEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDY 546
IEKA D++N +LQ+LE+GRLTD +GR VDFKNT+LI TSN+G+ I K +GF +
Sbjct: 638 IEKADKDIYNTLLQVLEEGRLTDGQGRIVDFKNTVLIFTSNLGTRDISK-AVGMGFS-NA 695
Query: 547 DEKD--SSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDR 604
E+D + Y R+KS V +ELK++FRPEFLNR+D+++VF QLT+ ++ ++ D+++ V
Sbjct: 696 GEQDEAAQYERMKSKVDDELKKHFRPEFLNRIDDIVVFHQLTREQIVQMVDLLMGRVRRA 755
Query: 605 LKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVI 664
L+ KD+ ++VTE+ + + + G++P GARPLRR I R +ED ++EK+L E G+ V
Sbjct: 756 LEDKDMGIEVTEKAKNLLAKRGFDPVLGARPLRRTIQREIEDELSEKILFGEFGAGEIVT 815
Query: 665 VDVDS 669
VDV++
Sbjct: 816 VDVEN 820
>gi|323694810|ref|ZP_08108965.1| ATPase AAA-2 domain-containing protein [Clostridium symbiosum
WAL-14673]
gi|323501126|gb|EGB17033.1| ATPase AAA-2 domain-containing protein [Clostridium symbiosum
WAL-14673]
Length = 830
Score = 755 bits (1949), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/654 (57%), Positives = 510/654 (77%), Gaps = 10/654 (1%)
Query: 19 GNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTA 78
GN P L+ + +LT+LA+EGKLDPV+GR+ +++RV+QIL RR KNNPCLIGEPGVGKTA
Sbjct: 169 GN-TPNLDSFSRDLTELAKEGKLDPVIGRETEMKRVIQILSRRGKNNPCLIGEPGVGKTA 227
Query: 79 IAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIIL 138
+ EGLAQ I SG+VP+TI K+V++LD+ +VAG+KYRGEFEER+KK++ E+K+ +I+L
Sbjct: 228 VVEGLAQLIISGNVPETIAKKRVVSLDLSGMVAGSKYRGEFEERIKKVLSEVKEDGDILL 287
Query: 139 FIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQP 198
FIDE+HT+IGAG AEGAIDA+NILKPSLARGE+Q IGATT++EYRK+IEKD ALERRFQP
Sbjct: 288 FIDEIHTIIGAGGAEGAIDASNILKPSLARGEIQLIGATTVEEYRKYIEKDAALERRFQP 347
Query: 199 VKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLID 258
V V EPS +++I+IL+GLR RYE HHK+ T+EAL +A +L+ +YI+DRFLPDKAIDLID
Sbjct: 348 VMVEEPSEEDSIEILRGLRSRYEEHHKVTITNEALEAAVKLAARYINDRFLPDKAIDLID 407
Query: 259 EAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISAL 318
EA S++RL PEE + LE++++++ ++K +A++ + +EKAG+++ ++ + +I +
Sbjct: 408 EASSKLRLTVYTEPEEIKVLEEDIKKLERQKEDAIKAEAYEKAGDIKKKQDKKREKIEKI 467
Query: 319 VDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRV 378
DK ++ E VV + +I IVS WT IPV K++ +ES+RLLK+E LH+RV
Sbjct: 468 RDKWQK------EKNSRKLVVGDNEIADIVSDWTRIPVRKLAEEESERLLKLESILHERV 521
Query: 379 IGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMI 438
+GQ+EAV A+S+AIRR RVGLK+P RPI SF+F GPTGVGK+EL+KAL+ FG+E AMI
Sbjct: 522 VGQEEAVTAVSKAIRRGRVGLKDPKRPIGSFLFLGPTGVGKTELSKALSEAMFGTENAMI 581
Query: 439 RLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMM 498
R+DMSE+ME+H+VSK+IGSPPGYVGY EGGQL+E VRR PY+V+LFDEIEKAHPDVFN++
Sbjct: 582 RVDMSEYMEKHSVSKMIGSPPGYVGYEEGGQLSEKVRRNPYSVILFDEIEKAHPDVFNIL 641
Query: 499 LQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKS 558
LQIL+DG +TD++GR +DFKNT+LIMTSN G+ I +R+GF D D K + Y +K+
Sbjct: 642 LQILDDGHITDAQGRKIDFKNTVLIMTSNAGAENI-ISPKRLGFSSDSDAK-TDYEFMKN 699
Query: 559 LVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTK-DIELQVTER 617
V +E+K+ F+PEFLNR+DE++VF L K ++EIA IMLK + R K + + L V +
Sbjct: 700 RVMDEVKRMFKPEFLNRIDEIMVFHPLNKKNIEEIAGIMLKTIIRRTKAQVGMSLTVDDG 759
Query: 618 FRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDG 671
+ E+GY+ YGARPLRR I +ED ++E++L IK+ D V+V D +G
Sbjct: 760 AVAYLAEKGYDEKYGARPLRRTIQNQIEDKLSEELLEGHIKKDDEVLVTRDGEG 813
>gi|355622927|ref|ZP_09046937.1| hypothetical protein HMPREF1020_01016 [Clostridium sp. 7_3_54FAA]
gi|354822667|gb|EHF07020.1| hypothetical protein HMPREF1020_01016 [Clostridium sp. 7_3_54FAA]
Length = 824
Score = 755 bits (1949), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/654 (57%), Positives = 510/654 (77%), Gaps = 10/654 (1%)
Query: 19 GNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTA 78
GN P L+ + +LT+LA+EGKLDPV+GR+ +++RV+QIL RR KNNPCLIGEPGVGKTA
Sbjct: 163 GN-TPNLDSFSRDLTELAKEGKLDPVIGRETEMKRVIQILSRRGKNNPCLIGEPGVGKTA 221
Query: 79 IAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIIL 138
+ EGLAQ I SG+VP+TI K+V++LD+ +VAG+KYRGEFEER+KK++ E+K+ +I+L
Sbjct: 222 VVEGLAQLIISGNVPETIAKKRVVSLDLSGMVAGSKYRGEFEERIKKVLSEVKEDGDILL 281
Query: 139 FIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQP 198
FIDE+HT+IGAG AEGAIDA+NILKPSLARGE+Q IGATT++EYRK+IEKD ALERRFQP
Sbjct: 282 FIDEIHTIIGAGGAEGAIDASNILKPSLARGEIQLIGATTVEEYRKYIEKDAALERRFQP 341
Query: 199 VKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLID 258
V V EPS +++I+IL+GLR RYE HHK+ T+EAL +A +L+ +YI+DRFLPDKAIDLID
Sbjct: 342 VMVEEPSEEDSIEILRGLRSRYEEHHKVTITNEALEAAVKLAARYINDRFLPDKAIDLID 401
Query: 259 EAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISAL 318
EA S++RL PEE + LE++++++ ++K +A++ + +EKAG+++ ++ + +I +
Sbjct: 402 EASSKLRLTVYTEPEEIKVLEEDIKKLERQKEDAIKAEAYEKAGDIKKKQDKKREKIEKI 461
Query: 319 VDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRV 378
DK ++ E VV + +I IVS WT IPV K++ +ES+RLLK+E LH+RV
Sbjct: 462 RDKWQK------EKNSRKLVVGDNEIADIVSDWTRIPVRKLAEEESERLLKLESILHERV 515
Query: 379 IGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMI 438
+GQ+EAV A+S+AIRR RVGLK+P RPI SF+F GPTGVGK+EL+KAL+ FG+E AMI
Sbjct: 516 VGQEEAVTAVSKAIRRGRVGLKDPKRPIGSFLFLGPTGVGKTELSKALSEAMFGTENAMI 575
Query: 439 RLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMM 498
R+DMSE+ME+H+VSK+IGSPPGYVGY EGGQL+E VRR PY+V+LFDEIEKAHPDVFN++
Sbjct: 576 RVDMSEYMEKHSVSKMIGSPPGYVGYEEGGQLSEKVRRNPYSVILFDEIEKAHPDVFNIL 635
Query: 499 LQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKS 558
LQIL+DG +TD++GR +DFKNT+LIMTSN G+ I +R+GF D D K + Y +K+
Sbjct: 636 LQILDDGHITDAQGRKIDFKNTVLIMTSNAGAENI-ISPKRLGFSSDSDAK-TDYEFMKN 693
Query: 559 LVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTK-DIELQVTER 617
V +E+K+ F+PEFLNR+DE++VF L K ++EIA IMLK + R K + + L V +
Sbjct: 694 RVMDEVKRMFKPEFLNRIDEIMVFHPLNKKNIEEIAGIMLKTIIRRTKAQVGMSLTVDDG 753
Query: 618 FRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDG 671
+ E+GY+ YGARPLRR I +ED ++E++L IK+ D V+V D +G
Sbjct: 754 AVAYLAEKGYDEKYGARPLRRTIQNQIEDKLSEELLEGHIKKDDEVLVTRDGEG 807
>gi|266621305|ref|ZP_06114240.1| negative regulator of genetic competence ClpC/MecB [Clostridium
hathewayi DSM 13479]
gi|288867045|gb|EFC99343.1| negative regulator of genetic competence ClpC/MecB [Clostridium
hathewayi DSM 13479]
Length = 816
Score = 755 bits (1949), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 379/653 (58%), Positives = 498/653 (76%), Gaps = 11/653 (1%)
Query: 15 GGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGV 74
G + PTL+ Y +LT LA EGKLDPV+GR+ +I+R++QIL RRTKNNPCLIGEPGV
Sbjct: 156 GSRTKGSTPTLDSYSRDLTALAREGKLDPVIGRETEIKRLIQILSRRTKNNPCLIGEPGV 215
Query: 75 GKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSD 134
GKTA+ EGLAQ I G+VP+TI K+V+TLD+ +VAG+KYRGEFEER+KK++ E+ +
Sbjct: 216 GKTAVVEGLAQMIIEGNVPETIAEKRVLTLDLSGMVAGSKYRGEFEERIKKVIAEVMEDG 275
Query: 135 EIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALER 194
E++LFIDE+HT+IGAG AEGAIDA+NILKPSLARGELQ IGATT++EYRK+IEKD ALER
Sbjct: 276 EVLLFIDEIHTIIGAGGAEGAIDASNILKPSLARGELQLIGATTIEEYRKYIEKDSALER 335
Query: 195 RFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAI 254
RFQPV V EPS +E + ILKGLR RYE HH + TDEAL +A +LS +YI+DRF+PDKAI
Sbjct: 336 RFQPVTVEEPSEEEAVAILKGLRGRYEAHHHVTITDEALTAAVKLSARYINDRFMPDKAI 395
Query: 255 DLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQ 314
D+IDEA S+VRL P E ++LEKE+ ++ +K A+R + +EKAG ++ ++ K +
Sbjct: 396 DVIDEAASKVRLTAFVEPPEIKDLEKEIEKLEDQKEAAIRDEAYEKAGAIKKKQEKKKEK 455
Query: 315 ISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETL 374
I + +K ++ + VV E +I +VS+WT IPV K+ ES RL +E L
Sbjct: 456 IDKIREKWQKDKDTRKQ------VVDEGEIADVVSSWTKIPVRKLEEGESQRLKNLESIL 509
Query: 375 HKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSE 434
H+RVIGQ+EAV A+++AIRR RVGLK+P RPI SF+F GPTGVGK+EL+KALA FG+E
Sbjct: 510 HERVIGQEEAVTAVAKAIRRGRVGLKDPKRPIGSFLFLGPTGVGKTELSKALAEAMFGTE 569
Query: 435 EAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDV 494
A+IR+DMSE+ME+H+VSK+IGSPPGYVGY EGGQL+E VRR PY+V+LFDEIEKAHPDV
Sbjct: 570 NALIRVDMSEYMEKHSVSKMIGSPPGYVGYDEGGQLSEKVRRNPYSVILFDEIEKAHPDV 629
Query: 495 FNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGS-SVIEKGGRRIGFDLDYDEKDSSY 553
FN++LQ+L+DG +TD++GR +DFKNT++IMTSN G+ S+I +R+GF DEK + Y
Sbjct: 630 FNILLQVLDDGHITDAQGRKIDFKNTVIIMTSNAGAESIISP--KRLGFGAVADEK-ADY 686
Query: 554 NRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTK-DIEL 612
+K V EE+K F+PEF+NR+DE+IVF L K +K+I IMLKE+ R K + +I L
Sbjct: 687 KVMKDRVMEEVKHIFKPEFINRIDEIIVFHPLNKGHMKDIVTIMLKEIMKRTKEQMNITL 746
Query: 613 QVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIV 665
V E +E ++ +GY+ YGARPLRR I LED +AE++L +KEGD V+V
Sbjct: 747 SVDEAAKEFLINKGYDEKYGARPLRRTIQSCLEDRLAEEILDGAVKEGDEVLV 799
>gi|163791642|ref|ZP_02186039.1| ATP-dependent Clp protease, ATP-binding subunit ClpC
[Carnobacterium sp. AT7]
gi|159873091|gb|EDP67198.1| ATP-dependent Clp protease, ATP-binding subunit ClpC
[Carnobacterium sp. AT7]
Length = 830
Score = 755 bits (1949), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 368/643 (57%), Positives = 491/643 (76%), Gaps = 9/643 (1%)
Query: 23 PTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEG 82
PTL+ +LT +A E KLDPVVGR +I+R++Q+L RRTKNNP L+GEPGVGKTAIAEG
Sbjct: 169 PTLDSLARDLTSVAREKKLDPVVGRHKEIQRIIQVLSRRTKNNPVLVGEPGVGKTAIAEG 228
Query: 83 LAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDE 142
LAQ+I G+VP + K+++ LDMG LVAGTKYRGEFEER+KK+++EI Q E+ILFIDE
Sbjct: 229 LAQKIIDGEVPTALANKRLMMLDMGSLVAGTKYRGEFEERMKKIIDEIYQDGEVILFIDE 288
Query: 143 VHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVP 202
+HTLIGAG AEGAIDA+NILKP+LARGELQ IGATTLDEY+K+IEKD ALERRF P+ V
Sbjct: 289 LHTLIGAGGAEGAIDASNILKPALARGELQTIGATTLDEYQKYIEKDAALERRFSPIHVD 348
Query: 203 EPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGS 262
PS +ET +IL GLR RYE HH ++ TDEA+ +A +LS +YI+ R LPDKAIDLIDE+ S
Sbjct: 349 PPSEEETEEILLGLRSRYEEHHGVKITDEAVHAAVKLSSRYITSRQLPDKAIDLIDESAS 408
Query: 263 RVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKG 322
+VRL + P EL + + K EA++ QDFEKA +R +EM + +I L
Sbjct: 409 KVRLDVSSKPSPVAAAIAELEDLIQSKEEAIQSQDFEKAARIRIKEMKQRKKIENL---- 464
Query: 323 KEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQD 382
+ K E +A VTE DI +VS WT IPV+++ ESDRL+ +E+ LHKRVIGQ+
Sbjct: 465 --LQKKEGKASSNSLQVTERDIAEVVSLWTSIPVQQMEQKESDRLMNLEKILHKRVIGQE 522
Query: 383 EAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDM 442
+AV ++SRAIRR+R GLK+PNRPI SF+F GPTGVGK+ELAKALA FG+EEA++R+DM
Sbjct: 523 QAVGSVSRAIRRSRSGLKDPNRPIGSFMFLGPTGVGKTELAKALAEAMFGNEEALVRVDM 582
Query: 443 SEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQIL 502
SEFME+++ S+LIGSPPGYVGY EGGQLTE +R++PY+V+LFDE+EKAHPDVFN++LQ+L
Sbjct: 583 SEFMEKYSTSRLIGSPPGYVGYDEGGQLTEKIRQKPYSVILFDEVEKAHPDVFNILLQVL 642
Query: 503 EDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTE 562
+DG LTDSKGR VDFKNT++IMTSN+G++ + + + +GF +KD S ++ + E
Sbjct: 643 DDGHLTDSKGRKVDFKNTVMIMTSNLGATAL-RDEKSVGFGTANSKKDHSA--MEKRIME 699
Query: 563 ELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERV 622
ELK+ F+PEF+NR+D+ IVF L K E+ +I +M + V RLK DI++++T+ + +
Sbjct: 700 ELKKTFKPEFINRIDDSIVFHSLEKPELTQIVKLMAQTVVKRLKDMDIDVKITQSAIDVI 759
Query: 623 VEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIV 665
+ GY+P YGARP+RRA+ + +ED ++E++L+ +K GD V +
Sbjct: 760 AKAGYDPEYGARPIRRALQKEIEDRLSEELLSGRVKIGDQVTI 802
>gi|339444381|ref|YP_004710385.1| chaperone ATPase [Eggerthella sp. YY7918]
gi|338904133|dbj|BAK43984.1| ATPase with chaperone activity, ATP-binding subunit [Eggerthella
sp. YY7918]
Length = 854
Score = 755 bits (1949), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 379/685 (55%), Positives = 520/685 (75%), Gaps = 11/685 (1%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
+VG+S G ++G+ L+E+GT+LT+ A +GKLDPV+GR +IERV+Q+L R
Sbjct: 143 LVGQSPVYAGRNPFDPNAGSSDSVLKEFGTDLTQKARDGKLDPVIGRAGEIERVMQVLSR 202
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
R KNNP LIGEPGVGKTA+ EGLAQ I S VPD + GK++ TLD+ LVAG+KYRGEFE
Sbjct: 203 RQKNNPLLIGEPGVGKTAVVEGLAQLIVSNQVPDILRGKRLFTLDVSALVAGSKYRGEFE 262
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
ERLKK ++E+ + +IILFIDE+HTLIGAG+AEG+IDAA ILKP L+RGE+Q IGATT+D
Sbjct: 263 ERLKKCIKEVMDAKDIILFIDEMHTLIGAGSAEGSIDAAAILKPPLSRGEIQVIGATTID 322
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRKH+EKD ALERRFQP+ V EP+ ++ ++I++GLR+RYE HH++ +TD+AL +A LS
Sbjct: 323 EYRKHLEKDSALERRFQPITVGEPNEEQAMRIMEGLRDRYEAHHQVHFTDDALHAAVSLS 382
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
+YI DRFLPDKAID++DEAG+R+R+R+ LP+E REL+ ELR++ EK+ A+ QDFE+
Sbjct: 383 NRYIQDRFLPDKAIDVLDEAGARMRIRNMTLPKELRELDDELRKLRSEKDTAIGAQDFER 442
Query: 301 AGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVS 360
A +LRD+E +LK + K +E ++ VT DI +VS TG+PV ++
Sbjct: 443 AAQLRDQESELKKKREEAEKKWEEDAQKSIHQ------VTVEDIADVVSMSTGVPVSNLT 496
Query: 361 TDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 420
E+++LL+ME LH+RV+GQ+EAV A+S+AIRR+R GLK+P RP SFIF GP+GVGK+
Sbjct: 497 EAETEKLLRMEAVLHERVVGQEEAVTALSKAIRRSRSGLKDPKRPAGSFIFLGPSGVGKT 556
Query: 421 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 480
EL+KALA + F SE+A++ DMSE+ME+H+VS+L+GSPPGYVG+ EGGQLT+AVR+RPY+
Sbjct: 557 ELSKALAEFLFNSEDALLSFDMSEYMEKHSVSRLVGSPPGYVGFDEGGQLTKAVRQRPYS 616
Query: 481 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI 540
VVLFDEIEKAHPDVFN++LQILE+GRLTD++GRTVDF+N ++IMTSNVG+ I + +
Sbjct: 617 VVLFDEIEKAHPDVFNILLQILEEGRLTDAQGRTVDFRNAVIIMTSNVGAREIAQ-PTTL 675
Query: 541 GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 600
GF + + S IKS V E+K+ FRPEFLNR+DE+IVF+ LT ++ EI +M+ +
Sbjct: 676 GFSAE-EHTGLSDKEIKSRVMAEMKKLFRPEFLNRIDEIIVFKSLTDEQIAEIVKLMVAD 734
Query: 601 VFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEG 660
+ +RL +++ + +TE + + +EG + ++GARPLRRAI RLLED ++E++L E K
Sbjct: 735 LRERLIAQNMSINLTEAACKLIAKEGTDATFGARPLRRAIQRLLEDPLSEEIL--EGKWA 792
Query: 661 DSVIVDVDS-DGNVTVLNGSSGAPE 684
I+DVD+ DG + GS PE
Sbjct: 793 SGSIIDVDAVDGELVFTQGSGAIPE 817
>gi|354612690|ref|ZP_09030634.1| ATPase AAA-2 domain protein [Saccharomonospora paurometabolica YIM
90007]
gi|353222993|gb|EHB87286.1| ATPase AAA-2 domain protein [Saccharomonospora paurometabolica YIM
90007]
Length = 850
Score = 755 bits (1949), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/669 (56%), Positives = 519/669 (77%), Gaps = 15/669 (2%)
Query: 3 GESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRT 62
G+ GAG G G+ + + L+++G NLT A EG LDPV+GR +IERV+Q+L RRT
Sbjct: 147 GKEPAEAGAGRGEGTPSSSL-VLDQFGRNLTAAAREGNLDPVIGRNSEIERVMQVLSRRT 205
Query: 63 KNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEER 122
KNNP +IGEPGVGKTA+ EGLAQ I G+VP+T++ K++ TLD+G LVAG++YRG+FEER
Sbjct: 206 KNNPVMIGEPGVGKTAVVEGLAQNIVKGEVPETLKEKQLYTLDLGSLVAGSRYRGDFEER 265
Query: 123 LKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEY 182
LKK+++EIK +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTL+EY
Sbjct: 266 LKKVLKEIKTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIGATTLEEY 325
Query: 183 RKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQ 242
RK+IEKD ALERRFQP++V EPS++ TI+ILKGLR+RYE HH++ TD ALV+AA L+ +
Sbjct: 326 RKYIEKDAALERRFQPIQVGEPSLEHTIEILKGLRDRYEAHHRISITDSALVAAASLADR 385
Query: 243 YISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAG 302
YI+DR+LPDKAIDLIDEAG+R+R+R P + RE ++++ + ++K A+ QDFE+A
Sbjct: 386 YINDRYLPDKAIDLIDEAGARMRIRRMTAPPDLREFDEKIADVRRDKESAIDAQDFERAA 445
Query: 303 ELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKV 359
LRD E L Q S + K+ GD+ VV EVD I +++ WTGIPV ++
Sbjct: 446 RLRDEEKTLLGQKSEREKQWKD--------GDL-DVVAEVDDEQIAEVLAHWTGIPVFRL 496
Query: 360 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 419
+ +E+ RLL+ME+ LHKR+IGQ++AVKA+S+AIRR R GLK+P RP SFIF+GP+GVGK
Sbjct: 497 TEEETTRLLRMEDELHKRIIGQEDAVKAVSQAIRRTRAGLKDPKRPSGSFIFAGPSGVGK 556
Query: 420 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 479
+EL+KALA + FG ++A+I++DM EF +R+T S+L G+PPGYVGY EGGQLTE VRR+P+
Sbjct: 557 TELSKALANFLFGEDDALIQIDMGEFHDRYTASRLFGAPPGYVGYEEGGQLTEKVRRKPF 616
Query: 480 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 539
+VVLFDEIEKAH +++N +LQ+LEDGRLTD +GRTVDFKNT+LI TSN+G+ I K
Sbjct: 617 SVVLFDEIEKAHQEIYNTLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGTQDISK-SVS 675
Query: 540 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 599
+GF DE ++ Y+++K V EE+K++FRPEFLNR+D++IVF QLT+ ++ E+ D+M
Sbjct: 676 LGFTSGSDE-ETRYDKMKQKVNEEMKKHFRPEFLNRIDDVIVFHQLTRDQIIEMVDLMTS 734
Query: 600 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 659
V ++LK +D+ L++T++ + + + G++P GARPLRR I R +ED ++EK+L E++
Sbjct: 735 RVEEQLKGRDMALELTDKAKALLAKRGFDPVLGARPLRRTIQREVEDQLSEKILFGEVQP 794
Query: 660 GDSVIVDVD 668
G +IVDV+
Sbjct: 795 GQIIIVDVE 803
>gi|420153551|ref|ZP_14660509.1| Clp amino terminal domain protein [Actinomyces massiliensis F0489]
gi|394759147|gb|EJF41931.1| Clp amino terminal domain protein [Actinomyces massiliensis F0489]
Length = 851
Score = 754 bits (1948), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 384/686 (55%), Positives = 515/686 (75%), Gaps = 23/686 (3%)
Query: 15 GGSSGNKMPT----LEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIG 70
GGSS +P+ L+++G NLT A EGKLDPV+GR ++ERV+QIL RRTKNNP LIG
Sbjct: 154 GGSSKEGVPSGSAILDQFGRNLTAAAREGKLDPVIGRHKEMERVMQILSRRTKNNPVLIG 213
Query: 71 EPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEI 130
EPGVGKTA+ EGL+Q I GDVP+T+ K++ +LDMG LVAG++YRG+FEERLKK+++E+
Sbjct: 214 EPGVGKTAVVEGLSQAIVHGDVPETLRDKQLYSLDMGSLVAGSRYRGDFEERLKKVLKEV 273
Query: 131 KQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDP 190
+ +IILFIDE+HTL+GAGAAEGA+DAA+ILKP LARGELQ IGATTL+EYRK IEKD
Sbjct: 274 RTRGDIILFIDEIHTLVGAGAAEGAVDAASILKPMLARGELQTIGATTLEEYRK-IEKDA 332
Query: 191 ALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLP 250
ALERRFQPV V +PS++ET+ IL GLR+RYE H++ TD+A+ +AA+L+ +YI+DRFLP
Sbjct: 333 ALERRFQPVTVDQPSIEETVGILTGLRDRYEAFHRVVITDDAIQAAAKLADRYINDRFLP 392
Query: 251 DKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMD 310
DKAIDLIDEAG+R+R+R P E RE++ + ++ +EK A+ QDFE+A LRD E
Sbjct: 393 DKAIDLIDEAGARLRIRRMTAPPELREIDDRIAKVKREKESAIDDQDFERAAALRDDERR 452
Query: 311 LKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKVSTDESDRL 367
L + +E + +GD+ V EVD + +++ TGIPV K++ ES +L
Sbjct: 453 LSEE--------REDKEKAWRSGDLDQV-AEVDEGLVAEVLAMSTGIPVVKLTEAESAKL 503
Query: 368 LKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALA 427
L ME LHKR+IGQD+A++A+S++IRR R GLK+P RP SFIF+GPTGVGK+ELAKALA
Sbjct: 504 LGMETELHKRIIGQDKAIEALSKSIRRTRAGLKDPKRPGGSFIFAGPTGVGKTELAKALA 563
Query: 428 AYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEI 487
+ F E+A+I+LDMSEF E+HTVS+L G+PPGYVGY EGGQLTE VRRRP++VVLFDE+
Sbjct: 564 EFLFDDEDALIQLDMSEFAEKHTVSRLFGAPPGYVGYDEGGQLTEKVRRRPFSVVLFDEV 623
Query: 488 EKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYD 547
EKAHPD+FN +LQILEDG L+D++GR VDFKNT++IMT+N+GS I G+ +
Sbjct: 624 EKAHPDIFNSLLQILEDGHLSDAQGREVDFKNTVIIMTTNLGSKDI---GKSVATGFQST 680
Query: 548 EKDS-SYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLK 606
E + Y +K+ V ELKQ FRPEFLNR+D++IVF QLTK EV++I D+M+ + RL
Sbjct: 681 EGGTMDYEEMKAHVNRELKQQFRPEFLNRVDDLIVFPQLTKDEVRQIVDLMITRLAGRLV 740
Query: 607 TKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVD 666
+++ +++T+ +E + E G++P GARPLRRAI R +ED+++EK+L EI+ G VIVD
Sbjct: 741 EQEMTIELTDAAKELLAERGFDPVLGARPLRRAIQRDIEDALSEKILFGEIERGQKVIVD 800
Query: 667 VDSDGNVT--VLNGSSGAPESLADPL 690
+ +G + G P+ +DPL
Sbjct: 801 AEGEGILGEFTFRGEPWDPKIGSDPL 826
>gi|342215074|ref|ZP_08707743.1| negative regulator of genetic competence ClpC/MecB [Veillonella sp.
oral taxon 780 str. F0422]
gi|341590180|gb|EGS33429.1| negative regulator of genetic competence ClpC/MecB [Veillonella sp.
oral taxon 780 str. F0422]
Length = 808
Score = 754 bits (1948), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/675 (56%), Positives = 518/675 (76%), Gaps = 17/675 (2%)
Query: 6 TEAVGAGVGG--------GSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQI 57
E V A VGG + + + + +Y +L + A++GK+DPV+GR +I+RV+QI
Sbjct: 134 VEKVNAIVGGEEPSSNPTQGTASDLGEISDYAIDLNESAKQGKIDPVIGRDTEIQRVIQI 193
Query: 58 LGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRG 117
L RRTKNNP LIGEPGVGKTAIAEGLAQRI SGDVPD + K++I++ + ++AG KYRG
Sbjct: 194 LSRRTKNNPVLIGEPGVGKTAIAEGLAQRIVSGDVPDVLRDKRIISVSLSSMLAGAKYRG 253
Query: 118 EFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGAT 177
EFEERLKK+M+E++ D++I+FIDE+HTLIGAGA EGA+DAANILKP+LARG Q IGAT
Sbjct: 254 EFEERLKKVMDEVQDHDDMIVFIDEIHTLIGAGATEGAMDAANILKPALARGNFQVIGAT 313
Query: 178 TLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAA 237
TLDEY+KHIEKD ALERRFQPV+V EPS ++ + ILKGLR+RYE HK++ TDEAL +A
Sbjct: 314 TLDEYKKHIEKDAALERRFQPVQVGEPSEEDALSILKGLRDRYEAFHKVQITDEALAAAV 373
Query: 238 QLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQD 297
LS +YI+DRFLPDKAID++DEA S+VR+ + + LE EL Q+ KEK AV QD
Sbjct: 374 HLSSRYIADRFLPDKAIDVMDEAASKVRMAVFTATPDVKALEDELVQVQKEKEAAVTAQD 433
Query: 298 FEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVE 357
FE+A LRD+E +L++ I++ +E SK ++E+ VVTE +I +VS W+GIPV
Sbjct: 434 FERAATLRDKEKELESDIAS----KQEDSKKDSES---KLVVTESEIAAVVSEWSGIPVS 486
Query: 358 KVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGV 417
+V+ +ES+RLL++EE LH+RVIGQDEAV A+S+A+RRAR GLK+P RPI SF+F GPTGV
Sbjct: 487 RVAEEESERLLRLEEELHQRVIGQDEAVVAVSKAVRRARAGLKDPKRPIGSFLFLGPTGV 546
Query: 418 GKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRR 477
GK+ELA++LA+ FG E AMIR+DMSE+ME+H VS+L+G+PPGYVGY EGGQLTEAVRRR
Sbjct: 547 GKTELARSLASNLFGDENAMIRIDMSEYMEKHAVSRLVGAPPGYVGYDEGGQLTEAVRRR 606
Query: 478 PYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGG 537
PY+VVLFDE+EKAHPD FN++LQ+L+DGRLTD++GRTVDF+NT++IMTSN+G+ +++
Sbjct: 607 PYSVVLFDEVEKAHPDFFNILLQVLDDGRLTDNQGRTVDFRNTVIIMTSNLGAKYLKEDT 666
Query: 538 RRIGFDLDYDEKDSSYNR--IKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIAD 595
+GF E++S ++ +K V + +K +FRPEFLNR+DEMIVF L +++ I
Sbjct: 667 AAMGFLAAKGEEESGKDKASMKKDVLQAVKSHFRPEFLNRIDEMIVFHALETEQLQSIVR 726
Query: 596 IMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAR 655
I+L+ V RL + +EL+V++ ++V EG + + GARPL+RAI RL+ED +++ +L
Sbjct: 727 ILLQSVTTRLHEQGMELEVSDEAMNKIVAEGTDFAMGARPLKRAIQRLVEDPISDAILEG 786
Query: 656 EIKEGDSVIVDVDSD 670
+ EG ++ V V++D
Sbjct: 787 KAGEGKTIHVVVEND 801
>gi|422489253|ref|ZP_16565580.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL020PA1]
gi|328758387|gb|EGF72003.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL020PA1]
Length = 844
Score = 754 bits (1948), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/673 (56%), Positives = 507/673 (75%), Gaps = 13/673 (1%)
Query: 3 GESTEAVGAGVG-GGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRR 61
G+ +A +G G + L+++G NLT+ A +G+LDPV+GR+ +IERV+ +L RR
Sbjct: 147 GDERQAATSGAPEAGPQQSSATILDQFGRNLTEAARDGELDPVIGREREIERVMVVLSRR 206
Query: 62 TKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEE 121
TKNNP LIGEPGVGK+A EGLAQ I GDVP+T+ KK+ +LD+G +VAG++YRG+FEE
Sbjct: 207 TKNNPVLIGEPGVGKSACVEGLAQAIVRGDVPETLRDKKIYSLDLGSMVAGSRYRGDFEE 266
Query: 122 RLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDE 181
R+KK+++EIK +IILFIDE+HTL+GAGAAEGAIDAA++LKP LARGELQ IGATTLDE
Sbjct: 267 RMKKVLKEIKNRGDIILFIDEIHTLVGAGAAEGAIDAASMLKPMLARGELQTIGATTLDE 326
Query: 182 YRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSY 241
YRK+IEKD ALERRFQP++V EPS+ I+ILKGLR+RYE HHK+ TDEA+ SAA L+
Sbjct: 327 YRKYIEKDAALERRFQPIQVDEPSIPLAIEILKGLRDRYEAHHKITITDEAITSAANLAS 386
Query: 242 QYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKA 301
+YI DRFLPDKAIDLIDEAG+R+ +R P + RE ++ + ++ EK A+ QDFE+A
Sbjct: 387 RYIQDRFLPDKAIDLIDEAGARMNIRRMTAPPDLREFDERIARVRVEKEAAIDAQDFERA 446
Query: 302 GELRDREMDLKAQISALVDKGKEMSKAETEAGD--VGPVVTEVDIQHIVSAWTGIPVEKV 359
LRD E L A+ +E + E + GD V VV +I ++S TGIPV K+
Sbjct: 447 ARLRDDEKKLLAE--------REAKEEEWKQGDESVPAVVGPDEIAEVLSGATGIPVFKL 498
Query: 360 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 419
+ +ES RLL ME+ + KR +GQ++AVKA+ R+IRR R GLK+P RP SFIF+GP+GVGK
Sbjct: 499 TEEESQRLLHMEDEIGKRYVGQEDAVKALCRSIRRTRAGLKDPKRPAGSFIFAGPSGVGK 558
Query: 420 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 479
+EL KAL + FG E+A+I LDMSE+ E+HT S++ GSPPG+VGY EGGQLTE VRR+P+
Sbjct: 559 TELTKALTEFLFGDEDALITLDMSEYSEKHTASRMFGSPPGFVGYEEGGQLTEKVRRKPF 618
Query: 480 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 539
+V+LFDEIEKAHPD+FN +LQIL++GRLTD++GR VDFKNT++++T+N+G+ I K
Sbjct: 619 SVILFDEIEKAHPDIFNSLLQILDEGRLTDAQGRVVDFKNTVIVLTTNLGTRDISK-SVN 677
Query: 540 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 599
+GF D+ +SSY ++K+ VTEELK +FRPEFLNRLDE+IVF QLT+ ++ I D+M+
Sbjct: 678 LGFS-KADDVESSYEKMKAKVTEELKGHFRPEFLNRLDEIIVFHQLTQPDILRIVDLMVG 736
Query: 600 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 659
++ DRL KD+ ++VT +E + G++P GARPLRR I R +ED +AEK+L E+K
Sbjct: 737 QLEDRLADKDMGIEVTPAAKELLSTRGFDPLLGARPLRRTIQRDIEDVLAEKILFGEVKP 796
Query: 660 GDSVIVDVDSDGN 672
G V+VD +G+
Sbjct: 797 GQIVVVDAAPEGS 809
>gi|50841767|ref|YP_054994.1| Clp family ATP-binding protease [Propionibacterium acnes KPA171202]
gi|289424196|ref|ZP_06425979.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes SK187]
gi|289428978|ref|ZP_06430658.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes J165]
gi|295129846|ref|YP_003580509.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes SK137]
gi|335050407|ref|ZP_08543373.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium sp. 409-HC1]
gi|335054183|ref|ZP_08547003.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium sp. 434-HC2]
gi|342212083|ref|ZP_08704808.1| Clp amino terminal domain protein [Propionibacterium sp. CC003-HC2]
gi|354606251|ref|ZP_09024222.1| ATP-dependent Clp protease ATP-binding subunit [Propionibacterium
sp. 5_U_42AFAA]
gi|365961999|ref|YP_004943565.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes TypeIA2 P.acn31]
gi|365964241|ref|YP_004945806.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes TypeIA2 P.acn17]
gi|365973180|ref|YP_004954739.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes TypeIA2 P.acn33]
gi|386023229|ref|YP_005941532.1| putative ATP-dependent Clp protease ATP-binding subunit
[Propionibacterium acnes 266]
gi|387502650|ref|YP_005943879.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes 6609]
gi|407934659|ref|YP_006850301.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes C1]
gi|417931045|ref|ZP_12574418.1| Clp amino terminal domain protein [Propionibacterium acnes SK182]
gi|419420498|ref|ZP_13960727.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes PRP-38]
gi|422384263|ref|ZP_16464404.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL096PA3]
gi|422387113|ref|ZP_16467230.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL096PA2]
gi|422391910|ref|ZP_16471984.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL099PA1]
gi|422394956|ref|ZP_16474997.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL097PA1]
gi|422425099|ref|ZP_16502045.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL043PA1]
gi|422427037|ref|ZP_16503955.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL087PA1]
gi|422429131|ref|ZP_16506036.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL072PA2]
gi|422432061|ref|ZP_16508931.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL059PA2]
gi|422434917|ref|ZP_16511775.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL083PA2]
gi|422436826|ref|ZP_16513673.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL092PA1]
gi|422442639|ref|ZP_16519442.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL002PA1]
gi|422446431|ref|ZP_16523176.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL027PA1]
gi|422447675|ref|ZP_16524407.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL036PA3]
gi|422450219|ref|ZP_16526936.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL030PA2]
gi|422453070|ref|ZP_16529766.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL087PA3]
gi|422456626|ref|ZP_16533290.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL030PA1]
gi|422460620|ref|ZP_16537254.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL038PA1]
gi|422474118|ref|ZP_16550588.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL056PA1]
gi|422476581|ref|ZP_16553020.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL007PA1]
gi|422479506|ref|ZP_16555916.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL063PA1]
gi|422481731|ref|ZP_16558130.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL036PA1]
gi|422484002|ref|ZP_16560381.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL043PA2]
gi|422487811|ref|ZP_16564142.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL013PA2]
gi|422491570|ref|ZP_16567881.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL086PA1]
gi|422494356|ref|ZP_16570651.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL025PA1]
gi|422497810|ref|ZP_16574083.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL002PA3]
gi|422500239|ref|ZP_16576495.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL063PA2]
gi|422504740|ref|ZP_16580974.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL036PA2]
gi|422509213|ref|ZP_16585371.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL046PA2]
gi|422511361|ref|ZP_16587504.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL059PA1]
gi|422514198|ref|ZP_16590319.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL087PA2]
gi|422515417|ref|ZP_16591529.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL110PA2]
gi|422517986|ref|ZP_16594058.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL074PA1]
gi|422520633|ref|ZP_16596675.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL045PA1]
gi|422523564|ref|ZP_16599576.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL053PA2]
gi|422526127|ref|ZP_16602126.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL083PA1]
gi|422531493|ref|ZP_16607441.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL110PA1]
gi|422535148|ref|ZP_16611071.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL072PA1]
gi|422536019|ref|ZP_16611927.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL078PA1]
gi|422538510|ref|ZP_16614384.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL013PA1]
gi|422541293|ref|ZP_16617151.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL037PA1]
gi|422543842|ref|ZP_16619682.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL082PA1]
gi|422546341|ref|ZP_16622168.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL050PA3]
gi|422550764|ref|ZP_16626561.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL050PA1]
gi|422552944|ref|ZP_16628731.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL005PA3]
gi|422554827|ref|ZP_16630597.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL005PA2]
gi|422557534|ref|ZP_16633277.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL025PA2]
gi|422559213|ref|ZP_16634941.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL005PA1]
gi|422562339|ref|ZP_16638017.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL046PA1]
gi|422567557|ref|ZP_16643183.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL002PA2]
gi|422570683|ref|ZP_16646278.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL067PA1]
gi|422578082|ref|ZP_16653611.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL005PA4]
gi|50839369|gb|AAT82036.1| putative Clp-family ATP-binding protease [Propionibacterium acnes
KPA171202]
gi|289154893|gb|EFD03575.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes SK187]
gi|289157979|gb|EFD06202.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes J165]
gi|291377338|gb|ADE01193.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes SK137]
gi|313765265|gb|EFS36629.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL013PA1]
gi|313772820|gb|EFS38786.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL074PA1]
gi|313793158|gb|EFS41225.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL110PA1]
gi|313802753|gb|EFS43971.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL110PA2]
gi|313806411|gb|EFS44918.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL087PA2]
gi|313810960|gb|EFS48674.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL083PA1]
gi|313814541|gb|EFS52255.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL025PA1]
gi|313815263|gb|EFS52977.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL059PA1]
gi|313817439|gb|EFS55153.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL046PA2]
gi|313821974|gb|EFS59688.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL036PA1]
gi|313824130|gb|EFS61844.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL036PA2]
gi|313826497|gb|EFS64211.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL063PA1]
gi|313828678|gb|EFS66392.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL063PA2]
gi|313831726|gb|EFS69440.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL007PA1]
gi|313834393|gb|EFS72107.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL056PA1]
gi|313840416|gb|EFS78130.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL086PA1]
gi|314916082|gb|EFS79913.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL005PA4]
gi|314917003|gb|EFS80834.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL050PA1]
gi|314921279|gb|EFS85110.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL050PA3]
gi|314926635|gb|EFS90466.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL036PA3]
gi|314931059|gb|EFS94890.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL067PA1]
gi|314954988|gb|EFS99394.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL027PA1]
gi|314959028|gb|EFT03130.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL002PA1]
gi|314961301|gb|EFT05402.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL002PA2]
gi|314964571|gb|EFT08671.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL082PA1]
gi|314969669|gb|EFT13767.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL037PA1]
gi|314977070|gb|EFT21165.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL045PA1]
gi|314980355|gb|EFT24449.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL072PA2]
gi|314985530|gb|EFT29622.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL005PA1]
gi|314987356|gb|EFT31447.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL005PA2]
gi|314989103|gb|EFT33194.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL005PA3]
gi|315078414|gb|EFT50445.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL053PA2]
gi|315082119|gb|EFT54095.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL078PA1]
gi|315086096|gb|EFT58072.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL002PA3]
gi|315087681|gb|EFT59657.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL072PA1]
gi|315097365|gb|EFT69341.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL038PA1]
gi|315099470|gb|EFT71446.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL059PA2]
gi|315102025|gb|EFT74001.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL046PA1]
gi|315106363|gb|EFT78339.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL030PA1]
gi|315110110|gb|EFT82086.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL030PA2]
gi|327331349|gb|EGE73088.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL096PA2]
gi|327333335|gb|EGE75055.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL096PA3]
gi|327334854|gb|EGE76565.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL097PA1]
gi|327445648|gb|EGE92302.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL013PA2]
gi|327447270|gb|EGE93924.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL043PA1]
gi|327449698|gb|EGE96352.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL043PA2]
gi|327454548|gb|EGF01203.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL087PA3]
gi|327456619|gb|EGF03274.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL083PA2]
gi|327457104|gb|EGF03759.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL092PA1]
gi|328755603|gb|EGF69219.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL087PA1]
gi|328756683|gb|EGF70299.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL025PA2]
gi|328761872|gb|EGF75382.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL099PA1]
gi|332674685|gb|AEE71501.1| putative ATP-dependent Clp protease ATP-binding subunit
[Propionibacterium acnes 266]
gi|333765299|gb|EGL42653.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium sp. 434-HC2]
gi|333769680|gb|EGL46777.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium sp. 409-HC1]
gi|335276695|gb|AEH28600.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes 6609]
gi|340767627|gb|EGR90152.1| Clp amino terminal domain protein [Propionibacterium sp. CC003-HC2]
gi|340769368|gb|EGR91892.1| Clp amino terminal domain protein [Propionibacterium acnes SK182]
gi|353557658|gb|EHC27026.1| ATP-dependent Clp protease ATP-binding subunit [Propionibacterium
sp. 5_U_42AFAA]
gi|365738680|gb|AEW82882.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes TypeIA2 P.acn31]
gi|365740922|gb|AEW80616.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes TypeIA2 P.acn17]
gi|365743179|gb|AEW78376.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes TypeIA2 P.acn33]
gi|379978872|gb|EIA12196.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes PRP-38]
gi|407903240|gb|AFU40070.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes C1]
gi|456740409|gb|EMF64930.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes FZ1/2/0]
Length = 844
Score = 754 bits (1948), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/673 (56%), Positives = 507/673 (75%), Gaps = 13/673 (1%)
Query: 3 GESTEAVGAGVG-GGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRR 61
G+ +A +G G + L+++G NLT+ A +G+LDPV+GR+ +IERV+ +L RR
Sbjct: 147 GDERQAATSGAPEAGPQQSSATILDQFGRNLTEAARDGELDPVIGREREIERVMVVLSRR 206
Query: 62 TKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEE 121
TKNNP LIGEPGVGK+A EGLAQ I GDVP+T+ KK+ +LD+G +VAG++YRG+FEE
Sbjct: 207 TKNNPVLIGEPGVGKSACVEGLAQAIVRGDVPETLRDKKIYSLDLGSMVAGSRYRGDFEE 266
Query: 122 RLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDE 181
R+KK+++EIK +IILFIDE+HTL+GAGAAEGAIDAA++LKP LARGELQ IGATTLDE
Sbjct: 267 RMKKVLKEIKNRGDIILFIDEIHTLVGAGAAEGAIDAASMLKPMLARGELQTIGATTLDE 326
Query: 182 YRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSY 241
YRK+IEKD ALERRFQP++V EPS+ I+ILKGLR+RYE HHK+ TDEA+ SAA L+
Sbjct: 327 YRKYIEKDAALERRFQPIQVDEPSIPLAIEILKGLRDRYEAHHKITITDEAITSAANLAS 386
Query: 242 QYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKA 301
+YI DRFLPDKAIDLIDEAG+R+ +R P + RE ++ + ++ EK A+ QDFE+A
Sbjct: 387 RYIQDRFLPDKAIDLIDEAGARMNIRRMTAPPDLREFDERIARVRVEKEAAIDAQDFERA 446
Query: 302 GELRDREMDLKAQISALVDKGKEMSKAETEAGD--VGPVVTEVDIQHIVSAWTGIPVEKV 359
LRD E L A+ +E + E + GD V VV +I ++S TGIPV K+
Sbjct: 447 AGLRDDEKKLLAE--------REAKEEEWKQGDESVPAVVGPDEIAEVLSGATGIPVFKL 498
Query: 360 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 419
+ +ES RLL ME+ + KR +GQ++AVKA+ R+IRR R GLK+P RP SFIF+GP+GVGK
Sbjct: 499 TEEESQRLLHMEDEIGKRYVGQEDAVKALCRSIRRTRAGLKDPKRPAGSFIFAGPSGVGK 558
Query: 420 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 479
+EL KAL + FG E+A+I LDMSE+ E+HT S++ GSPPG+VGY EGGQLTE VRR+P+
Sbjct: 559 TELTKALTEFLFGDEDALITLDMSEYSEKHTASRMFGSPPGFVGYEEGGQLTEKVRRKPF 618
Query: 480 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 539
+V+LFDEIEKAHPD+FN +LQIL++GRLTD++GR VDFKNT++++T+N+G+ I K
Sbjct: 619 SVILFDEIEKAHPDIFNSLLQILDEGRLTDAQGRVVDFKNTVIVLTTNLGTRDISK-SVN 677
Query: 540 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 599
+GF D+ +SSY ++K+ VTEELK +FRPEFLNRLDE+IVF QLT+ ++ I D+M+
Sbjct: 678 LGFS-KADDVESSYEKMKAKVTEELKGHFRPEFLNRLDEIIVFHQLTQPDILRIVDLMVG 736
Query: 600 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 659
++ DRL KD+ ++VT +E + G++P GARPLRR I R +ED +AEK+L E+K
Sbjct: 737 QLEDRLADKDMGIEVTPAAKELLSTRGFDPLLGARPLRRTIQRDIEDVLAEKILFGEVKP 796
Query: 660 GDSVIVDVDSDGN 672
G V+VD +G+
Sbjct: 797 GQIVVVDAAPEGS 809
>gi|229547309|ref|ZP_04436034.1| ATPase/chaperone ClpC, specificity factor for ClpP protease
[Enterococcus faecalis TX1322]
gi|229307548|gb|EEN73535.1| ATPase/chaperone ClpC, specificity factor for ClpP protease
[Enterococcus faecalis TX1322]
Length = 831
Score = 754 bits (1947), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 376/674 (55%), Positives = 511/674 (75%), Gaps = 16/674 (2%)
Query: 23 PTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEG 82
PTL+ +LTKLA E LDPVVGR ++ R++QIL RRTKNNP L+GEPGVGKTAIAEG
Sbjct: 171 PTLDSLARDLTKLAREQSLDPVVGRGTEVRRLIQILSRRTKNNPVLVGEPGVGKTAIAEG 230
Query: 83 LAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDE 142
LAQ+I + +VP+ ++GK+++ LDMG LVAGTKYRGEFE+RLKK+++EI Q ++ILFIDE
Sbjct: 231 LAQKIVNREVPEDMQGKRLMMLDMGALVAGTKYRGEFEDRLKKVVDEIYQDGQVILFIDE 290
Query: 143 VHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVP 202
+HTLIGAG AEGAIDA+NILKP+LARGELQ IGATTLDEY+K+IEKD ALERRF ++V
Sbjct: 291 LHTLIGAGGAEGAIDASNILKPALARGELQTIGATTLDEYQKYIEKDAALERRFARIQVA 350
Query: 203 EPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGS 262
EP+ +E +ILKGLR RYE HH + TDEAL +A QLS +Y++DR LPDKAIDL+DE+ +
Sbjct: 351 EPTPEEVEEILKGLRSRYEKHHGVEITDEALHAAVQLSIRYLNDRQLPDKAIDLMDESAA 410
Query: 263 RVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVD-K 321
+VRL A P E EL E+ Q+ EK EA++ Q FE A +R +E + ++ L+ K
Sbjct: 411 KVRLDKADQPSEINELRTEISQLITEKEEAIQNQSFESAARIRQKEKQVMEKLEELIAVK 470
Query: 322 GKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQ 381
K +S T+ VTE D+ +VS WTG+P++++ ES+RL+++E LH+RV+GQ
Sbjct: 471 EKSLSGYSTQ-------VTEEDVAGVVSQWTGVPLQQLEKKESERLMELETILHQRVVGQ 523
Query: 382 DEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLD 441
+EAV+A+SRAIRRAR GLK+P RPI SF+F GPTGVGK+ELAKALA FGSEEA+IR+D
Sbjct: 524 NEAVEAVSRAIRRARSGLKDPARPIGSFMFLGPTGVGKTELAKALAEAMFGSEEALIRVD 583
Query: 442 MSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQI 501
MSEFME+++ S+LIGSPPGYVGY EGGQLTE +R+RPY+V+L DE+EKAHPDVFN++LQ+
Sbjct: 584 MSEFMEKYSTSRLIGSPPGYVGYEEGGQLTEKIRQRPYSVILLDEVEKAHPDVFNILLQV 643
Query: 502 LEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNR--IKSL 559
L+DG LTD+KGR VDF+NT+LIMTSN+G++ I + + +GF++ KD S N ++
Sbjct: 644 LDDGHLTDAKGRKVDFRNTILIMTSNLGATAIRE-EKHVGFNV----KDISKNHELMQKR 698
Query: 560 VTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFR 619
+ EELK+ FRPEFLNR+DE +VF L + E+ EI IM + V R+ +++++++T
Sbjct: 699 IMEELKKAFRPEFLNRIDETVVFHSLKQEEIHEIVKIMSQSVVKRMAEQEVKVKITPAAI 758
Query: 620 ERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNGS 679
E + + G++P YGARP+RRA+ + +ED ++E +L+ +I+ GD V + S G +T+ +
Sbjct: 759 EVIGKVGFDPEYGARPIRRALQKEVEDRLSEALLSGQIQLGDKVTLGA-SKGKITLNVRA 817
Query: 680 SGAPESLADPLPVV 693
AP++ A L V
Sbjct: 818 PKAPKTEAKELQTV 831
>gi|312879531|ref|ZP_07739331.1| ATPase AAA-2 domain protein [Aminomonas paucivorans DSM 12260]
gi|310782822|gb|EFQ23220.1| ATPase AAA-2 domain protein [Aminomonas paucivorans DSM 12260]
Length = 835
Score = 754 bits (1947), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/650 (58%), Positives = 514/650 (79%), Gaps = 8/650 (1%)
Query: 17 SSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGK 76
+ +K PTL++ G L+ +A++G+LDPV+GR +I+R+VQIL RRTKNNP LIG+PGVGK
Sbjct: 165 NGSSKTPTLDQLGIELSDMAKKGELDPVIGRAKEIQRLVQILSRRTKNNPVLIGDPGVGK 224
Query: 77 TAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEI 136
TAI EGLAQRI +G++P+ ++GK+V+ L++G LVAGTKYRGEFEER++KL++E++++ +
Sbjct: 225 TAIVEGLAQRIIAGEIPEVLKGKRVVQLNVGNLVAGTKYRGEFEERMRKLVKELREAKGV 284
Query: 137 ILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRF 196
ILFIDE+HTL+GAG AEGA+DAANILKPSLARGE Q IGATTLDEYRK+IEKD ALERRF
Sbjct: 285 ILFIDEIHTLVGAGGAEGAVDAANILKPSLARGEFQVIGATTLDEYRKYIEKDAALERRF 344
Query: 197 QPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDL 256
QP++V EPS ++T++IL GLR+RYE HH+++ D+AL +AA+LS +YI++RFLPDKAIDL
Sbjct: 345 QPIQVEEPSEEDTVKILAGLRDRYEAHHRVKLCDDALAAAARLSKRYITERFLPDKAIDL 404
Query: 257 IDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQIS 316
IDEA +R RL+ + PE+ ++LE+ L I KEK AV Q+FEKA +RD E L +I
Sbjct: 405 IDEAAARARLKTMEAPEDLKDLERSLEGIRKEKESAVMAQEFEKAARMRDEERRLFEEIE 464
Query: 317 ALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHK 376
K + + + E P+V DI HIVS WTGIPV +++ +E+ RLL+MEE +H+
Sbjct: 465 HR-RKSWQNDRNQEE-----PLVGAEDIAHIVSEWTGIPVLQLTEEEAARLLRMEEEVHR 518
Query: 377 RVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEA 436
R++GQDEA+ A++RA+RRAR GLK+P RP+ SF+F GPTGVGK+ELA++LAA+ FGSEEA
Sbjct: 519 RMVGQDEAIGAVARAVRRARSGLKDPKRPVGSFLFLGPTGVGKTELARSLAAFLFGSEEA 578
Query: 437 MIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFN 496
++R DMSEFMERH V+KLIG+PPGYVGY EGG+LTEAVRRRPY VVLFDEIEKAHPDVFN
Sbjct: 579 LVRFDMSEFMERHEVAKLIGAPPGYVGYEEGGKLTEAVRRRPYAVVLFDEIEKAHPDVFN 638
Query: 497 MMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLD-YDEKDSSYNR 555
++LQ+LEDGRLTD +G +VDF+NT++IMTSNVG+ + K G+ +GF LD E+D ++++
Sbjct: 639 ILLQLLEDGRLTDGQGHSVDFRNTVVIMTSNVGAQDLMK-GQTLGFSLDGSSERDHAWSK 697
Query: 556 IKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVT 615
+K + E ++ FRPEFLNR+D+++VFR L + E+ I IM EV R +D+ L++
Sbjct: 698 MKDTILEAARRTFRPEFLNRVDDIVVFRTLDREELLAIVKIMAAEVTRRAGEQDLGLELD 757
Query: 616 ERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIV 665
E ++E+G++P YGARPLRR + RL+ED +A+ +L ++ GD V V
Sbjct: 758 EASLTLILEKGFDPKYGARPLRRTLQRLVEDRLADLLLEGTLRRGDRVRV 807
>gi|415717998|ref|ZP_11467110.1| ATPase AAA-2 domain protein [Gardnerella vaginalis 1500E]
gi|388060353|gb|EIK83047.1| ATPase AAA-2 domain protein [Gardnerella vaginalis 1500E]
Length = 879
Score = 754 bits (1947), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/669 (55%), Positives = 513/669 (76%), Gaps = 9/669 (1%)
Query: 4 ESTEAVGAG-VGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRT 62
E E AG V S+ + L+++G NLT A EGKLDPV+GR +IERV+ IL RRT
Sbjct: 153 EKGELANAGSVQDKSNKSGSALLDQFGRNLTLEAREGKLDPVIGRSEEIERVMVILSRRT 212
Query: 63 KNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEER 122
KNNP LIG+PGVGKTA+ EGLAQ+I GDVP+T++ K++ +LD+G ++AG++YRG+FEER
Sbjct: 213 KNNPVLIGDPGVGKTAVVEGLAQKIVEGDVPETLKNKQIYSLDLGSMIAGSRYRGDFEER 272
Query: 123 LKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEY 182
LKK+++EIK +++LFIDE+HT++GAG+A+GA+ A+++LKP LARGELQ IGATT DEY
Sbjct: 273 LKKVLKEIKTRGDVVLFIDEIHTIVGAGSADGALGASDMLKPMLARGELQTIGATTTDEY 332
Query: 183 RKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQ 242
RK+IEKD ALERRFQP++VPEP++ ETI+ILKGLR RYE HH + TD AL S+A+LS +
Sbjct: 333 RKYIEKDAALERRFQPIQVPEPTIAETIEILKGLRSRYENHHHVTITDGALQSSAELSDR 392
Query: 243 YISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAG 302
YI DR LPDKAIDLIDEAG+R+R++ P E +EL ++ +I+++K+EA++ QDFE+A
Sbjct: 393 YIQDRHLPDKAIDLIDEAGARLRIKRLTQPPELKELNHKIAKISEKKDEAIKQQDFEEAA 452
Query: 303 ELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTD 362
LRD + L+ + + KE + E E+ +V VV E I +VS+ TGIPV K++
Sbjct: 453 NLRDDQEKLENEAAE-----KEKAWREGES-NVKMVVDEDMIASVVSSTTGIPVVKLTQA 506
Query: 363 ESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSEL 422
ES +LL+ME LHKR++GQDEAV A++R+IRRARVGLK+P RP SFIF+GPTGVGK+EL
Sbjct: 507 ESQKLLQMESELHKRIVGQDEAVSALARSIRRARVGLKDPKRPSGSFIFAGPTGVGKTEL 566
Query: 423 AKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVV 482
AKALA + F ++A+IR+DMSEF E++ S+L G+PPGYVGY EGG+LTE VRR+P++VV
Sbjct: 567 AKALANFLFDDDDALIRVDMSEFAEKYAASRLFGAPPGYVGYEEGGELTEKVRRKPFSVV 626
Query: 483 LFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGF 542
LFDEIEKAHPD+FN +LQ+L+DG LTD +GR VDFKNT++I+T+N+G+ I K GF
Sbjct: 627 LFDEIEKAHPDIFNTLLQVLDDGHLTDGQGRKVDFKNTIIILTTNLGTRDIAKAA-NTGF 685
Query: 543 DLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVF 602
L + DS+Y R+K V ELK+ FRPEFLNRLD+ IVFRQLT+ EV++I D+ +K +
Sbjct: 686 TLG-NSSDSTYQRMKDQVNSELKRNFRPEFLNRLDDTIVFRQLTEPEVRQIVDMDIKLLN 744
Query: 603 DRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDS 662
+RL + L++T+ + + ++G++P GARPLRR I R +ED ++EK+L EI +G+
Sbjct: 745 NRLFDHHMSLELTDAAKNLLAQKGFDPLLGARPLRRVIQRDIEDIISEKILLNEISDGER 804
Query: 663 VIVDVDSDG 671
+ VD + +G
Sbjct: 805 IEVDAEGEG 813
>gi|227497047|ref|ZP_03927298.1| ATP-dependent protease, ATPase subunit [Actinomyces urogenitalis
DSM 15434]
gi|226833465|gb|EEH65848.1| ATP-dependent protease, ATPase subunit [Actinomyces urogenitalis
DSM 15434]
Length = 860
Score = 754 bits (1947), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 388/696 (55%), Positives = 517/696 (74%), Gaps = 24/696 (3%)
Query: 4 ESTEAVGAGVGGGSSGNKMPT----LEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 59
E EAV AG G S P+ L+++G NLT A EGKLDPV+GR ++ERV+QIL
Sbjct: 146 EGKEAVTAG---GPSDKGTPSGSAILDQFGRNLTAAAREGKLDPVIGRHKEMERVMQILS 202
Query: 60 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 119
RRTKNNP LIGEPGVGKTA+ EGL+Q I GDVP+T+ K++ +LDMG LVAG++YRG+F
Sbjct: 203 RRTKNNPVLIGEPGVGKTAVVEGLSQAIVHGDVPETLRDKQLYSLDMGSLVAGSRYRGDF 262
Query: 120 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 179
EERLKK+++E++ +IILFIDE+HTL+GAGAAEGA+DAA+ILKP LARGELQ IGATTL
Sbjct: 263 EERLKKVLKEVRTRGDIILFIDEIHTLVGAGAAEGAVDAASILKPMLARGELQTIGATTL 322
Query: 180 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 239
+EYRK IEKD ALERRFQPV V +PS++ETI IL GLR+RYE H++ TD+A+ +AA+L
Sbjct: 323 EEYRK-IEKDAALERRFQPVTVDQPSIEETIGILNGLRDRYEAFHRVVITDDAIEAAAKL 381
Query: 240 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 299
+ +YI+DRFLPDKAIDLIDEAG+R+R+R P E R ++ ++ ++ +EK A+ QDFE
Sbjct: 382 ADRYINDRFLPDKAIDLIDEAGARLRIRRMTAPPELRAIDDKIAEVKREKEAAIDDQDFE 441
Query: 300 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPV--VTEVDIQHIVSAWTGIPVE 357
+A LRD E L + +E +A ++G+V V V E + +++ TGIPV
Sbjct: 442 RAAALRDDERRLAEE--------RETKEAAWKSGEVEQVAEVNEELVAEVLAMSTGIPVV 493
Query: 358 KVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGV 417
K++ ES +LL ME LHKR+IGQD+A++A+S++IRR R GLK+P RP SFIF+GPTGV
Sbjct: 494 KLTEAESAKLLGMEAELHKRIIGQDKAIEALSKSIRRTRAGLKDPKRPGGSFIFAGPTGV 553
Query: 418 GKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRR 477
GK+ELAKALA + F E+A+I+LDMSEF E+HTVS+L G+PPGYVGY EGGQLTE VRRR
Sbjct: 554 GKTELAKALAEFLFDDEDALIQLDMSEFAEKHTVSRLFGAPPGYVGYDEGGQLTEKVRRR 613
Query: 478 PYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGG 537
P++VVLFDE+EKAHPD+FN +LQILEDG LTD++GR VDFKNT++IMT+N+GS I G
Sbjct: 614 PFSVVLFDEVEKAHPDIFNSLLQILEDGHLTDAQGRVVDFKNTVIIMTTNLGSKDI---G 670
Query: 538 RRIGFDLDYDEKDS-SYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADI 596
+ + E + Y +K+ V ELK FRPEFLNR+D++IVF QLTK EV++I D+
Sbjct: 671 KAVATGFQSTEGGTMEYEEMKAHVNRELKSQFRPEFLNRVDDLIVFPQLTKAEVRQIVDL 730
Query: 597 MLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLARE 656
M+ + RL +++ +++T+ +E + E G++P GARPLRRAI R +ED+++EK+L E
Sbjct: 731 MIARLDKRLVEQEMTIELTDAAKELLAERGFDPVLGARPLRRAIQRDIEDALSEKILFGE 790
Query: 657 IKEGDSVIVDVDSDGNVT--VLNGSSGAPESLADPL 690
I+ G VIVD +G + G P+ +DPL
Sbjct: 791 IERGQKVIVDAQGEGILGEFTFRGEPWDPKIGSDPL 826
>gi|325067417|ref|ZP_08126090.1| ATPase AAA-2 domain-containing protein [Actinomyces oris K20]
Length = 832
Score = 754 bits (1946), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/670 (56%), Positives = 512/670 (76%), Gaps = 17/670 (2%)
Query: 4 ESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTK 63
E+ A G G SG+ + L+++G NLT A EGKLDPV+GR+ ++ERV+Q+L RRTK
Sbjct: 149 ETVNAGGPSKEGTPSGSAI--LDQFGRNLTAAAREGKLDPVIGRKKEMERVMQVLSRRTK 206
Query: 64 NNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERL 123
NNP LIGEPGVGKTA+ EGL+Q I GDVP+T+ K++ +LDMG LVAG++YRG+FEERL
Sbjct: 207 NNPVLIGEPGVGKTAVVEGLSQAIVHGDVPETLRDKQLYSLDMGSLVAGSRYRGDFEERL 266
Query: 124 KKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYR 183
KK+++E++ +I+LFIDE+HTL+GAGAAEGA+DAA+ILKP LARGELQ IGATTLDEYR
Sbjct: 267 KKVLKEVRTRGDIVLFIDEIHTLVGAGAAEGAVDAASILKPMLARGELQTIGATTLDEYR 326
Query: 184 KHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQY 243
K IEKD ALERRFQPV V +PS++ETI IL GLR+RYE H++ TDEA+ +AA+L+ +Y
Sbjct: 327 K-IEKDAALERRFQPVTVEQPSIEETIGILTGLRDRYEAFHRIVITDEAIEAAAKLADRY 385
Query: 244 ISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGE 303
I+DRFLPDKAIDL+DEAG+R+R+R P E RE+++++ Q+ +EK A+ QDFE+A
Sbjct: 386 INDRFLPDKAIDLVDEAGARLRIRRMTAPPELREIDEQIAQVKREKESAIDDQDFERAAS 445
Query: 304 LRDREMDLKAQISALVDKGKEMSKAETEAGDVGPV--VTEVDIQHIVSAWTGIPVEKVST 361
LRD E L + +A KE + ++GD+ V V E I +++ TGIPV K++
Sbjct: 446 LRDDERRLADERAA-----KEKA---WKSGDLDQVAEVDEALIAEVLAMSTGIPVVKLTE 497
Query: 362 DESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSE 421
ES +LL ME LHKR+IGQ++A++A+S++IRR R GLK+P RP SFIF+GPTGVGK+E
Sbjct: 498 AESAKLLNMEAELHKRIIGQNKAIEALSKSIRRTRAGLKDPKRPGGSFIFAGPTGVGKTE 557
Query: 422 LAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTV 481
LAKALA + F E+A+I+LDMSEF E+HTVS+L G+PPGYVGY EGGQLTE VRRRP++V
Sbjct: 558 LAKALAEFLFDDEDALIQLDMSEFAEKHTVSRLFGAPPGYVGYDEGGQLTEKVRRRPFSV 617
Query: 482 VLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIG 541
VLFDE+EKAHPD+FN +LQILEDG L+D++GR VDFKNT++IMT+N+GS I G+ +
Sbjct: 618 VLFDEVEKAHPDIFNSLLQILEDGHLSDAQGRVVDFKNTVIIMTTNLGSKDI---GKSVA 674
Query: 542 FDLDYDEKDS-SYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 600
E + Y +K+ V ELKQ FRPEFLNR+D++IVF QLTK EV++I D+M+
Sbjct: 675 TGFQSTESGAMDYEEMKAHVNRELKQQFRPEFLNRVDDLIVFPQLTKEEVRQIVDLMIVR 734
Query: 601 VFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEG 660
+ RL + + +++TE ++ + E G++P GARPLRRAI R +ED+++EK+L E++ G
Sbjct: 735 LDKRLAEQQMTIELTEAAKDLLAERGFDPVLGARPLRRAIQRDIEDALSEKILFGELERG 794
Query: 661 DSVIVDVDSD 670
VIVD + +
Sbjct: 795 QKVIVDAEGE 804
>gi|336324767|ref|YP_004604733.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
resistens DSM 45100]
gi|336100749|gb|AEI08569.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
resistens DSM 45100]
Length = 903
Score = 754 bits (1946), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/677 (56%), Positives = 518/677 (76%), Gaps = 25/677 (3%)
Query: 7 EAVGAGVG---GGSSGNKMP------TLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQI 57
E AGVG G SG+K+ L+++G NLT+ A++GKLDPVVGR+ +IERV+Q+
Sbjct: 172 EPAAAGVGSNSGAPSGSKIGQKSNSLVLDQFGRNLTQAAKDGKLDPVVGREKEIERVMQV 231
Query: 58 LGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRG 117
L RRTKNNP LIGEPGVGKTA+ EGLA I +G VP+T++ K++ +LD+G LVAG++YRG
Sbjct: 232 LSRRTKNNPVLIGEPGVGKTAVVEGLALDIVNGRVPETLKDKQLYSLDLGSLVAGSRYRG 291
Query: 118 EFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGAT 177
+FEERLKK+++EI Q +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGAT
Sbjct: 292 DFEERLKKVLKEINQRGDIILFIDEIHTLVGAGAAEGAIDAASILKPKLARGELQTIGAT 351
Query: 178 TLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAA 237
TLDEYRKHIEKD ALERRFQPV+VPEPSVD TI+ILKGLR+RYE HH++ TD AL +AA
Sbjct: 352 TLDEYRKHIEKDAALERRFQPVQVPEPSVDLTIEILKGLRDRYEAHHRVSITDGALAAAA 411
Query: 238 QLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQD 297
QL+ +YI+DRFLPDKA+DLIDEAG+R+R++ P+ +E+++++ + +K A+ QD
Sbjct: 412 QLADRYITDRFLPDKAVDLIDEAGARMRIKRMTAPKSIQEVDEKIAAVRTKKEAAIDEQD 471
Query: 298 FEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPV--VTEVDIQHIVSAWTGIP 355
FEKA LRD E L + +E + AG++ V V E I ++ WTGIP
Sbjct: 472 FEKAAALRDDERKLTEE--------REEKEKAWRAGELDEVAEVGEEQIAEVMGTWTGIP 523
Query: 356 VEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPT 415
V K++ +ES RLL+ME+ LHKR+IGQ++AVKA+SRAIRR R GLK+P RP SFIF+GP+
Sbjct: 524 VFKLTEEESSRLLRMEDELHKRIIGQEDAVKAVSRAIRRTRAGLKDPKRPSGSFIFAGPS 583
Query: 416 GVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVR 475
GVGK+EL+KALA + FG ++A++++DM EF ++ T S+L G+PPGYVGY EGGQLTE VR
Sbjct: 584 GVGKTELSKALAEFLFGEDDALVQIDMGEFHDKFTASRLFGAPPGYVGYDEGGQLTEKVR 643
Query: 476 RRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEK 535
R+P++VVLFDEIEKAH +++N +LQ+LEDGRLTD +GR VDFKNT+LI TSN+G+ I K
Sbjct: 644 RKPFSVVLFDEIEKAHTEIYNTLLQVLEDGRLTDGQGRMVDFKNTVLIFTSNLGTRDISK 703
Query: 536 GGRRIGFDLDY---DEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKE 592
+G D++ + Y R+K V +ELK++FRPEFLNR+D+++VF QLTK ++ +
Sbjct: 704 A---VGMGFSSGGEDDEATQYARMKDKVHDELKKHFRPEFLNRIDDIVVFHQLTKDQIVQ 760
Query: 593 IADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKM 652
+ D++L+ V + L+ KD+ L++TE+ + + + G++P GARPLRR I R +ED ++EK+
Sbjct: 761 MVDLLLRRVTNALEQKDMGLELTEQAKNLLAKRGFDPVLGARPLRRTIQREIEDQLSEKI 820
Query: 653 LAREIKEGDSVIVDVDS 669
L EI G+ V VDV++
Sbjct: 821 LFGEIGAGEIVTVDVEN 837
>gi|417932743|ref|ZP_12576081.1| Clp amino terminal domain protein [Propionibacterium acnes
SK182B-JCVI]
gi|340774379|gb|EGR96866.1| Clp amino terminal domain protein [Propionibacterium acnes
SK182B-JCVI]
Length = 842
Score = 754 bits (1946), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/673 (56%), Positives = 505/673 (75%), Gaps = 13/673 (1%)
Query: 3 GESTEAVGAGVG-GGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRR 61
G+ +A +G G + L+++G NLT A +G+LDPV+GR+ +IERV+ +L RR
Sbjct: 147 GDERQAATSGAPEAGPQQSSATILDQFGRNLTDAARDGELDPVIGREREIERVMVVLSRR 206
Query: 62 TKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEE 121
TKNNP LIGEPGVGK+A EGLAQ I GDVP+T+ KK+ +LD+G +VAG++YRG+FEE
Sbjct: 207 TKNNPVLIGEPGVGKSACVEGLAQAIVRGDVPETLRDKKIYSLDLGSMVAGSRYRGDFEE 266
Query: 122 RLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDE 181
R+KK+++EIK +IILFIDE+HTL+GAGAAEGAIDAA++LKP LARGELQ IGATTLDE
Sbjct: 267 RMKKVLKEIKNRGDIILFIDEIHTLVGAGAAEGAIDAASMLKPMLARGELQTIGATTLDE 326
Query: 182 YRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSY 241
YRK+IEKD ALERRFQP++V EPS+ I+ILKGLR+RYE HHK+ TDEA+ SAA L+
Sbjct: 327 YRKYIEKDAALERRFQPIQVDEPSIPLAIEILKGLRDRYEAHHKITITDEAITSAANLAS 386
Query: 242 QYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKA 301
+YI DRFLPDKAIDLIDEAG+R+ +R P + RE ++ + + EK A+ QDFE+A
Sbjct: 387 RYIQDRFLPDKAIDLIDEAGARMNIRRMTAPPDLREFDERIAHVRVEKEAAIDAQDFERA 446
Query: 302 GELRDREMDLKAQISALVDKGKEMSKAETEAGD--VGPVVTEVDIQHIVSAWTGIPVEKV 359
LRD E L A+ +E + E + GD V VV +I ++S TGIPV K+
Sbjct: 447 AGLRDDEKKLLAE--------REAKEEEWKQGDESVPAVVGPDEIAEVLSGATGIPVFKL 498
Query: 360 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 419
+ +ES RLL ME+ + KR +GQ++AVKA+ R+IRR R GLK+P RP SFIF+GP+GVGK
Sbjct: 499 TEEESQRLLHMEDEIGKRYVGQEDAVKALCRSIRRTRAGLKDPKRPAGSFIFAGPSGVGK 558
Query: 420 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 479
+EL KAL + FG E+A+I LDMSE+ E+HT S++ GSPPG+VGY EGGQLTE VRR+P+
Sbjct: 559 TELTKALTEFLFGDEDALITLDMSEYSEKHTASRMFGSPPGFVGYEEGGQLTEKVRRKPF 618
Query: 480 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 539
+V+LFDEIEKAHPD+FN +LQIL++GRLTD++GR VDFKNT++++T+N+G+ I K
Sbjct: 619 SVILFDEIEKAHPDIFNSLLQILDEGRLTDAQGRVVDFKNTVIVLTTNLGTRDISK-SVN 677
Query: 540 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 599
+GF D+ +SSY ++K+ VTEELK +FRPEFLNRLDE+IVF QLT ++ I D+M+
Sbjct: 678 LGFS-KADDVESSYEKMKAKVTEELKGHFRPEFLNRLDEIIVFHQLTPPDILRIVDLMVG 736
Query: 600 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 659
++ DRL KD+ ++VT +E + + G++P GARPLRR I R +ED +AEK+L E+K
Sbjct: 737 QLEDRLADKDMGIEVTPSAKELLAKRGFDPLLGARPLRRTIQRDIEDVLAEKILFGEVKP 796
Query: 660 GDSVIVDVDSDGN 672
G V+VD +G+
Sbjct: 797 GQIVVVDAAPEGS 809
>gi|159897035|ref|YP_001543282.1| ATPase [Herpetosiphon aurantiacus DSM 785]
gi|159890074|gb|ABX03154.1| ATPase AAA-2 domain protein [Herpetosiphon aurantiacus DSM 785]
Length = 837
Score = 754 bits (1946), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 394/687 (57%), Positives = 516/687 (75%), Gaps = 9/687 (1%)
Query: 3 GESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRT 62
G ST + AG + +K P L+ T+LT+LAE G+LDPVVGR+ +IERV+QIL RRT
Sbjct: 151 GSSTPSPSAGGERQAKQSKTPYLDALSTDLTELAEAGRLDPVVGRKDEIERVIQILSRRT 210
Query: 63 KNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEER 122
KNNP LIGEPGVGKTAIAEGLAQRI + DVPD+++GK+++TLDMG LVAGTKYRG+FEER
Sbjct: 211 KNNPALIGEPGVGKTAIAEGLAQRIVADDVPDSLKGKRLVTLDMGALVAGTKYRGQFEER 270
Query: 123 LKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEY 182
LK++++EIK+S ILFIDE HT+IGAG AEG +DAANILKP+L+RGELQCIGATTLDE+
Sbjct: 271 LKRVVDEIKES-RCILFIDEFHTIIGAGGAEGTLDAANILKPALSRGELQCIGATTLDEF 329
Query: 183 RKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQ 242
RK+IEKD ALERRFQPV V EP+++ETI+IL+G++ RYE H+L+ DEA+ +AA LS +
Sbjct: 330 RKYIEKDAALERRFQPVMVDEPTIEETIEILRGIKTRYEDFHQLQIEDEAITAAAVLSAR 389
Query: 243 YISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAG 302
Y+ DRFLPDKAIDLIDEA SRVR+ + P R+ + L I KEK+ A+ FE
Sbjct: 390 YVPDRFLPDKAIDLIDEASSRVRMYRSATPSALRDALRGLDAIRKEKDAALEEGQFEVVQ 449
Query: 303 ELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTD 362
+LR RE + +I+ L D+ ++ +E G P VT+ DI +V+ WTGIPV +++++
Sbjct: 450 DLRVREERMLQRITDLEDEEEKTRGSEQRKGK--PYVTQEDIAEVVAMWTGIPVMRLASE 507
Query: 363 ESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSEL 422
E++RL+KME+ LH+RVIGQ+E + I+RA+RRAR GLK+P RPI SFIF GPTGVGK+ L
Sbjct: 508 ETERLMKMEDYLHERVIGQEEPISTIARAVRRARAGLKDPKRPIGSFIFLGPTGVGKTLL 567
Query: 423 AKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVV 482
AKALA + FGSE+A+I++DMSEF ER S+L+GSPPGYVGY EGGQLT+AVRRRPY+VV
Sbjct: 568 AKALAEFMFGSEDALIKIDMSEFQERFNTSRLVGSPPGYVGYGEGGQLTDAVRRRPYSVV 627
Query: 483 LFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGF 542
LFDEIEKAHPD FN++LQ+LEDG LTD KGR VDF+NT++IMTSNVG+ I +G RIGF
Sbjct: 628 LFDEIEKAHPDTFNLLLQVLEDGNLTDGKGRRVDFRNTVIIMTSNVGTEQIRRGS-RIGF 686
Query: 543 DLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVF 602
+ + D R K V +ELK+ FRPEFLNR+D I+F LT +E++ IA + + V
Sbjct: 687 GGNRNTIDVEDTRKK--VDDELKRMFRPEFLNRIDGTIIFHPLTDIEIRNIARLEVNRVR 744
Query: 603 DRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDS 662
+L I+L VT+ + + + GY+P+YGARPLRR I ++ED +AE +L K+GD
Sbjct: 745 KQLVDHQIDLLVTDETLDLLAKRGYDPTYGARPLRRVITNMIEDGLAEGLLQGRFKDGDK 804
Query: 663 VIVDVDSDGNVTVLNGSSGAPESLADP 689
+ ++++ N VL A E L +P
Sbjct: 805 IHIELED--NEVVLRSEREAAE-LENP 828
>gi|239618401|ref|YP_002941723.1| ATPase AAA-2 domain protein [Kosmotoga olearia TBF 19.5.1]
gi|239507232|gb|ACR80719.1| ATPase AAA-2 domain protein [Kosmotoga olearia TBF 19.5.1]
Length = 828
Score = 754 bits (1946), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 359/663 (54%), Positives = 507/663 (76%), Gaps = 10/663 (1%)
Query: 7 EAVGAGVGGGSSGNKMPT----LEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRT 62
E+ G G+ + M T LE +GT+LT LA GKLDP++GR + +R++++L RR
Sbjct: 150 ESTTGGRSFGAQQSSMATSLKQLEGFGTDLTALARAGKLDPIIGRDVEKQRLMEVLSRRK 209
Query: 63 KNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEER 122
KNNP LIG+PGVGKTAI EGLAQ I + +VP+T++ K + LD+ L+AGTKYRGEFE+R
Sbjct: 210 KNNPVLIGDPGVGKTAIVEGLAQMIVNEEVPETLKNKAIFALDVASLIAGTKYRGEFEKR 269
Query: 123 LKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEY 182
LKKL++ +K + IILFIDE+HT++GAG+AEGA+DAANILKP+LA GE++CIG+TT DEY
Sbjct: 270 LKKLIQVVKNNGNIILFIDELHTIVGAGSAEGAVDAANILKPALASGEIRCIGSTTPDEY 329
Query: 183 RKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQ 242
RK++EKD ALERRFQ + V EP+V++TI IL+G++ +YE HHK+ YTD AL +A LS++
Sbjct: 330 RKYVEKDAALERRFQKIYVSEPTVEQTIGILRGIKHKYEAHHKVYYTDAALEAAVLLSHR 389
Query: 243 YISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAG 302
Y+SDRFLPDKAID+IDEAG+R RLR +P +EL+K++ ++ E+ +AV QD+E A
Sbjct: 390 YVSDRFLPDKAIDIIDEAGARARLRKLTVPSYLKELQKKIEKLRLEREDAVSRQDYEHAA 449
Query: 303 ELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTD 362
EL++ E L + +E +E ++E ++ IVS+WTGIP++K+
Sbjct: 450 ELKEEERVLMKTYKDEYNNWREKVDSEIVQ------ISEEEVAEIVSSWTGIPLKKLEQS 503
Query: 363 ESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSEL 422
+S+RLL +EE LHKR++GQDEA+ A+++AIRRAR GLK+P RPI +F+F GPTGVGK+EL
Sbjct: 504 DSERLLSLEEALHKRIVGQDEAITAVAKAIRRARSGLKDPRRPIGTFLFLGPTGVGKTEL 563
Query: 423 AKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVV 482
AKALA Y FG E+A++R DMSE+MER +VS+LIG+PPGYVGY EGG LTE +R+RP++++
Sbjct: 564 AKALAEYLFGDEKALVRFDMSEYMERFSVSRLIGAPPGYVGYDEGGTLTERIRKRPFSII 623
Query: 483 LFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGF 542
LFDEIEKAH D+FN++LQI++DGRLTDS+GR+VDFKNT++IMTSN+G I K + +GF
Sbjct: 624 LFDEIEKAHFDIFNLLLQIMDDGRLTDSQGRSVDFKNTIVIMTSNLGGEFINKTKKTLGF 683
Query: 543 DLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVF 602
+ ++ Y +K+ V EE+K+ FRPEFLNRLDE++VF LT+ ++K+I +I++ +
Sbjct: 684 VSAANVEEKEYESMKNSVLEEVKKTFRPEFLNRLDEIVVFHPLTREQIKKIIEILISDTR 743
Query: 603 DRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDS 662
RLK K ++L ++E +E +VE+G++P YGARPLRRAI R +ED +AE++L + GD+
Sbjct: 744 KRLKEKKMDLVLSEAAQEFLVEKGFDPVYGARPLRRAIQRYIEDPLAEEVLRGRFEPGDT 803
Query: 663 VIV 665
++V
Sbjct: 804 IMV 806
>gi|415726926|ref|ZP_11471154.1| ATPase AAA-2 domain protein [Gardnerella vaginalis 00703Dmash]
gi|388062655|gb|EIK85260.1| ATPase AAA-2 domain protein [Gardnerella vaginalis 00703Dmash]
Length = 868
Score = 754 bits (1946), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/669 (55%), Positives = 513/669 (76%), Gaps = 9/669 (1%)
Query: 4 ESTEAVGAG-VGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRT 62
E E AG V S+ + L+++G NLT A EGKLDPV+GR +IERV+ IL RRT
Sbjct: 153 EKGELANAGSVQDKSNKSGSALLDQFGRNLTLEAREGKLDPVIGRSEEIERVMVILSRRT 212
Query: 63 KNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEER 122
KNNP LIG+PGVGKTA+ EGLAQ+I GDVP+T++ K++ +LD+G ++AG++YRG+FEER
Sbjct: 213 KNNPVLIGDPGVGKTAVVEGLAQKIVEGDVPETLKNKQIYSLDLGSMIAGSRYRGDFEER 272
Query: 123 LKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEY 182
LKK+++EIK +++LFIDE+HT++GAG+A+GA+ A+++LKP LARGELQ IGATT DEY
Sbjct: 273 LKKVLKEIKTRGDVVLFIDEIHTIVGAGSADGALGASDMLKPMLARGELQTIGATTTDEY 332
Query: 183 RKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQ 242
RK+IEKD ALERRFQP++VPEP++ ETI+ILKGLR RYE HH + TD AL S+A+LS +
Sbjct: 333 RKYIEKDAALERRFQPIQVPEPTIAETIEILKGLRSRYENHHHVTITDGALQSSAELSDR 392
Query: 243 YISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAG 302
YI DR LPDKAIDLIDEAG+R+R++ P E +EL ++ +I+++K+EA++ QDFE+A
Sbjct: 393 YIQDRHLPDKAIDLIDEAGARLRIKRLTQPPELKELNHKIAKISEKKDEAIKQQDFEEAA 452
Query: 303 ELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTD 362
LRD + L+ + + KE + E E+ +V VV E I +VS+ TGIPV K++
Sbjct: 453 NLRDDQEKLENEAAE-----KEKAWREGES-NVKMVVDEDMIASVVSSTTGIPVVKLTQA 506
Query: 363 ESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSEL 422
ES +LL+ME LHKR++GQDEAV A++R+IRRARVGLK+P RP SFIF+GPTGVGK+EL
Sbjct: 507 ESQKLLQMESELHKRIVGQDEAVSALARSIRRARVGLKDPKRPSGSFIFAGPTGVGKTEL 566
Query: 423 AKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVV 482
AKALA + F ++A+IR+DMSEF E++ S+L G+PPGYVGY EGG+LTE VRR+P++VV
Sbjct: 567 AKALANFLFDDDDALIRVDMSEFAEKYAASRLFGAPPGYVGYEEGGELTEKVRRKPFSVV 626
Query: 483 LFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGF 542
LFDEIEKAHPD+FN +LQ+L+DG LTD +GR VDFKNT++I+T+N+G+ I K GF
Sbjct: 627 LFDEIEKAHPDIFNTLLQVLDDGHLTDGQGRKVDFKNTIIILTTNLGTRDIAKAA-NTGF 685
Query: 543 DLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVF 602
L + DS+Y R+K V ELK+ FRPEFLNRLD+ IVFRQLT+ EV++I D+ +K +
Sbjct: 686 TLG-NSSDSTYQRMKDQVNSELKRQFRPEFLNRLDDTIVFRQLTEPEVRQIVDMDIKLLN 744
Query: 603 DRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDS 662
+RL + L++T+ + + ++G++P GARPLRR I R +ED ++EK+L EI +G+
Sbjct: 745 NRLFDHHMSLELTDAAKNLLAQKGFDPLLGARPLRRVIQRDIEDIISEKILLNEISDGER 804
Query: 663 VIVDVDSDG 671
+ VD + +G
Sbjct: 805 IEVDAEGEG 813
>gi|348026597|ref|YP_004766402.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Megasphaera
elsdenii DSM 20460]
gi|341822651|emb|CCC73575.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Megasphaera
elsdenii DSM 20460]
Length = 810
Score = 753 bits (1945), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/645 (55%), Positives = 504/645 (78%), Gaps = 10/645 (1%)
Query: 25 LEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLA 84
L ++G +L + A++GK+DPV+GR+ +I RV+QIL RRTKNNP LIG PGVGKTAIAEGLA
Sbjct: 161 LSQFGRDLNEWAKKGKIDPVIGREKEISRVIQILSRRTKNNPVLIGAPGVGKTAIAEGLA 220
Query: 85 QRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVH 144
QRI +G+VPD++ K++ +LD+ +VAGTKYRGEFEER+K++++ I+Q D IILFIDE+H
Sbjct: 221 QRIINGNVPDSLLDKRIFSLDLASIVAGTKYRGEFEERIKRILDVIEQDDTIILFIDEIH 280
Query: 145 TLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEP 204
LIGAGA EGA+DAANILKP+LARG+LQCIGATT+DEY+KH EKD AL RRFQPV V EP
Sbjct: 281 QLIGAGAVEGAMDAANILKPALARGDLQCIGATTIDEYKKHFEKDAALARRFQPVLVGEP 340
Query: 205 SVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRV 264
+ D+ + IL GLR+RYE HK R TD+A+ +A +LS +YISDR+LPDKAID++DEA +RV
Sbjct: 341 TEDDAMAILFGLRDRYEAFHKARITDDAVRAAVKLSARYISDRYLPDKAIDVMDEAAARV 400
Query: 265 RLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKE 324
R++ E ++LE++L I KEK A+ G+DFEK LRD + ++ISAL
Sbjct: 401 RMKVYAPSHELQDLEQKLADINKEKEAALAGEDFEKCASLRDAGKKVSSEISAL------ 454
Query: 325 MSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEA 384
K + + D VVTE DI +VS WTG+PV++++ ES RLL +EE LHKRVI QD+A
Sbjct: 455 -QKEKKQHDDEKLVVTENDIADVVSMWTGVPVQQITETESQRLLHLEEELHKRVISQDDA 513
Query: 385 VKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSE 444
V A+++A+RRAR GLK+ NRPI SF+F GP+GVGK+ELA+ LAA FGS + MIR+DMSE
Sbjct: 514 VTAVAKAVRRARAGLKDANRPIGSFLFLGPSGVGKTELARTLAAQLFGSADNMIRIDMSE 573
Query: 445 FMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILED 504
FME+++VS+L+G+PPGYVGY EGG+LT+AVR +PY+V+LFDE+EKA D FN++LQ+L++
Sbjct: 574 FMEKYSVSRLVGAPPGYVGYEEGGELTDAVREKPYSVILFDEVEKASSDFFNLLLQVLDE 633
Query: 505 GRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYD---EKDSSYNRIKSLVT 561
GRLTDSKGRTVDF+NT++IMTSN+G+S ++ G +GF D ++++S+ K +
Sbjct: 634 GRLTDSKGRTVDFRNTVIIMTSNLGASHLKPSGPVMGFSTGGDSAKDREASFEVAKKEIM 693
Query: 562 EELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRER 621
++K++FRPEFLNR+DE+IVF+ L + ++++I DI+L+++ RL K + + T +
Sbjct: 694 ADVKRFFRPEFLNRIDEIIVFKPLEQKDLRQIVDILLQDLTKRLGEKGVAMDWTTAADDI 753
Query: 622 VVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVD 666
+V+EG + +YGARPL+RAI +L+ED ++E +L+ ++K+G+++ VD
Sbjct: 754 LVKEGTDFAYGARPLKRAIQKLVEDPISEMLLSGDVKDGNTIHVD 798
>gi|334564013|ref|ZP_08517004.1| ATP-dependent Clp protease [Corynebacterium bovis DSM 20582]
Length = 838
Score = 753 bits (1945), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/657 (56%), Positives = 509/657 (77%), Gaps = 10/657 (1%)
Query: 16 GSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVG 75
G N + L+++G NLT+ A +GKLDPVVGR+ ++ER++Q+L RRTKNNP LIGEPGVG
Sbjct: 173 GQKSNSL-VLDQFGRNLTQAARDGKLDPVVGREKEVERIMQVLSRRTKNNPVLIGEPGVG 231
Query: 76 KTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDE 135
KTA+ EGLA I +G VP+T++ K++ +LD+G LVAG++YRG+FEERLKK+++EI Q +
Sbjct: 232 KTAVVEGLALAIVNGKVPETLKDKQLYSLDLGSLVAGSRYRGDFEERLKKVLKEINQRGD 291
Query: 136 IILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERR 195
IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTL+EYRKHIEKD ALERR
Sbjct: 292 IILFIDEIHTLVGAGAAEGAIDAASILKPKLARGELQTIGATTLEEYRKHIEKDAALERR 351
Query: 196 FQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAID 255
FQPV+VPEPSV++T++ILKGLR+RYE HH++ TD ALV+AAQLS +YI+DRFLPDKA+D
Sbjct: 352 FQPVQVPEPSVEDTVEILKGLRDRYEAHHRVSITDGALVAAAQLSSRYINDRFLPDKAVD 411
Query: 256 LIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQI 315
LIDEAG+R+R++ P+ + +++++ ++ + K A+ QDFEKA LRD D +
Sbjct: 412 LIDEAGARMRIKRMTAPKSIQVVDEKIAEVRRRKEAAIDDQDFEKAAALRD---DERTLT 468
Query: 316 SALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLH 375
+K K+ E E DV V E I ++ WTGIPV K++ +ES RLL+ME+ LH
Sbjct: 469 EEREEKEKQWRAGELE--DVAE-VGEEQIAEVLGNWTGIPVVKLTEEESSRLLRMEDELH 525
Query: 376 KRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEE 435
KR+IGQ++AV+A+SRAIRR R GLK+P RP SFIF+GP+GVGK+EL+KALA + FG ++
Sbjct: 526 KRIIGQEDAVRAVSRAIRRTRAGLKDPKRPSGSFIFAGPSGVGKTELSKALAEFLFGDDD 585
Query: 436 AMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVF 495
A+I++DM EF +R T S+L G+PPGYVGY EGGQLTE VRR+P++VVLFDEIEKAH +++
Sbjct: 586 ALIQIDMGEFHDRFTASRLFGAPPGYVGYDEGGQLTEKVRRKPFSVVLFDEIEKAHQEIY 645
Query: 496 NMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFD-LDYDEKDSSYN 554
N +LQ+LEDGRLTD +GR VDFKNT+LI TSN+G+ I K +GF + ++ Y
Sbjct: 646 NTLLQVLEDGRLTDGQGRVVDFKNTVLIFTSNLGTQDISK-AVGMGFSGVGAADEAGRYE 704
Query: 555 RIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQV 614
R+K V +ELK++FRPEFLNR+D+++VF QLT+ E+ ++ D++L V L KD+ L+V
Sbjct: 705 RMKQKVNDELKKHFRPEFLNRIDDIVVFHQLTQDEIVQMVDLLLGRVERALAQKDMGLEV 764
Query: 615 TERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDG 671
++ ++ + ++G++P GARPLRR I R +ED ++EK+L EI G+ V VDV +DG
Sbjct: 765 SDTAKKLLADKGFDPVLGARPLRRTIQREIEDQLSEKILFGEIGAGEIVTVDV-TDG 820
>gi|295106036|emb|CBL03579.1| ATPases with chaperone activity, ATP-binding subunit [Gordonibacter
pamelaeae 7-10-1-b]
Length = 854
Score = 753 bits (1945), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 379/686 (55%), Positives = 515/686 (75%), Gaps = 13/686 (1%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
+VG+S G L+E+GT+LT+ A +GKLDPV+GR +IERV+Q+L R
Sbjct: 143 LVGQSPVYAGRNAFDPQGQGSDSVLKEFGTDLTQKARDGKLDPVIGRAGEIERVMQVLSR 202
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
R KNNP LIGEPGVGKTA+AEGLAQ I S VPD + K++ TLD+ LVAG+KYRGEFE
Sbjct: 203 RQKNNPLLIGEPGVGKTAVAEGLAQLIVSNQVPDILRDKRLFTLDVSALVAGSKYRGEFE 262
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
ERLKK ++E+ + +IILFIDE+HTLIGAG+AEG+IDAA ILKP L+RGE+Q IGATT+D
Sbjct: 263 ERLKKCIKEVMDAGDIILFIDEMHTLIGAGSAEGSIDAAAILKPPLSRGEIQVIGATTID 322
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRKH+EKD ALERRFQP+ V EP+ ++ ++I++GLR+RYE HH++ +TDEAL +A L+
Sbjct: 323 EYRKHLEKDSALERRFQPITVGEPNEEQALRIMEGLRDRYEAHHQVHFTDEALQAAVTLA 382
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
+YI DRFLPDKAID++DEAG+R+R+R+ LP+E R+L++ELR++ EK+ A+ QDFE+
Sbjct: 383 DRYIQDRFLPDKAIDVLDEAGARMRIRNMTLPKELRDLDEELRKLRAEKDGAIAAQDFER 442
Query: 301 AGELRDREMDLKAQISALVDKGKEMSK-AETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 359
A +LRD E LK DK + K E A VT DI +VS TG+PV +
Sbjct: 443 AAQLRDEEAQLK-------DKRVQAEKDWEENAQKTIQQVTVEDIADVVSMTTGVPVSNL 495
Query: 360 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 419
+ E+++LL+ME LH+RV+GQ+EAV A+S+AIRR+R GLK+P RP SFIF GP+GVGK
Sbjct: 496 TEAETEKLLRMESVLHERVVGQEEAVTALSKAIRRSRSGLKDPKRPAGSFIFLGPSGVGK 555
Query: 420 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 479
+EL+KALA + F SE+A++ DMSE+ME+H+VS+L+GSPPGYVG+ EGGQLT+AVR+RPY
Sbjct: 556 TELSKALAEFLFNSEDALLSFDMSEYMEKHSVSRLVGSPPGYVGFDEGGQLTKAVRQRPY 615
Query: 480 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 539
+VVLFDEIEKAHPDVFN++LQILE+GRLTD++GRTVDF+NT++IMTSNVG+ I +
Sbjct: 616 SVVLFDEIEKAHPDVFNILLQILEEGRLTDAQGRTVDFRNTVIIMTSNVGAREIAQ-PTT 674
Query: 540 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 599
+GF + + S IKS V E+K+ FRPEFLNR+DE+IVF+ L ++ EI +M+
Sbjct: 675 LGFSTE-EHAGLSDKEIKSRVMSEMKKLFRPEFLNRIDEIIVFKSLNDEQIAEIVKLMVA 733
Query: 600 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 659
++ +RL +++ + +T+ + + +EG + ++GARPLRRAI RLLED ++E++L E K
Sbjct: 734 DLRERLIAQNMSINLTDTACKLIAKEGTDATFGARPLRRAIQRLLEDPLSEEIL--EGKW 791
Query: 660 GDSVIVDVDS-DGNVTVLNGSSGAPE 684
I+DVD+ DG + GS PE
Sbjct: 792 STGSIIDVDAVDGELVFTQGSGVVPE 817
>gi|365902518|ref|ZP_09440341.1| ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones
[Lactobacillus malefermentans KCTC 3548]
Length = 832
Score = 753 bits (1945), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 363/653 (55%), Positives = 495/653 (75%), Gaps = 7/653 (1%)
Query: 23 PTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEG 82
PTL+ +LT++A+E ++DP VGR +++RV+QIL RRTKNNP LIGEPGVGKTAIAEG
Sbjct: 168 PTLDSLARDLTQMAKEDRMDPTVGRAKEVKRVIQILSRRTKNNPVLIGEPGVGKTAIAEG 227
Query: 83 LAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDE 142
LAQ+I +GDVP+ ++ K+++ LDMG LVAGTKYRGEFE+RLKK+++EI ++ILFIDE
Sbjct: 228 LAQKIIAGDVPEDMQQKRLMMLDMGSLVAGTKYRGEFEDRLKKVIDEIYNDGQVILFIDE 287
Query: 143 VHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVP 202
+HTLIGAG AEGAIDA+NILKP+LARGELQ IGATTLDEY+K+IE D ALERRF V+V
Sbjct: 288 LHTLIGAGGAEGAIDASNILKPALARGELQTIGATTLDEYQKYIESDAALERRFATVQVD 347
Query: 203 EPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGS 262
EP+ DET++IL GLR RYE HH + +D+AL A +LS +YISDRFLPDKAIDL+DEA +
Sbjct: 348 EPTEDETVEILHGLRPRYEDHHHVNISDDALNQAVKLSSRYISDRFLPDKAIDLMDEAAA 407
Query: 263 RVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKG 322
+VR+ H P + + E EL + ++ A+ Q FEKA E+RD+E+ L+A+I K
Sbjct: 408 KVRIDHMGQPSKLSKQEDELSDLHDKREAAILDQAFEKAAEIRDQEVKLEAKIQK---KQ 464
Query: 323 KEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQD 382
+ +K E + V+ D+ +V+ WTG+P+ ++ ESDRL+ +E LHKRVIGQ+
Sbjct: 465 ERAAKQNDEGQNYSLTVSAEDVAEVVAEWTGVPITQLQKSESDRLINLESVLHKRVIGQE 524
Query: 383 EAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDM 442
EAV A+SRAIRRAR GLK+PNRPI SF+F GPTGVGK+ELAKALA FGSE+ MIR+DM
Sbjct: 525 EAVSAVSRAIRRARSGLKDPNRPIGSFMFLGPTGVGKTELAKALAEAMFGSEDNMIRVDM 584
Query: 443 SEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQIL 502
SE+ME+++ S+LIGS PGYVGY EGGQLTE VR++PY+VVLFDE+EKAHPDVFN++LQ+L
Sbjct: 585 SEYMEKYSTSRLIGSAPGYVGYDEGGQLTEKVRQKPYSVVLFDEVEKAHPDVFNILLQVL 644
Query: 503 EDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTE 562
+DG LTDSKGR VDF+NT+LIMTSN+G++++ + + +GF ++K Y + + +
Sbjct: 645 DDGFLTDSKGRRVDFRNTILIMTSNLGATLL-RDEKTVGF--GAEDKAGDYKAMADTIKQ 701
Query: 563 ELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERV 622
+LKQ FRPEFLNR+DE ++F L K E+ +I +M K + +R+ + I +++T + +
Sbjct: 702 QLKQSFRPEFLNRIDETVIFHSLNKKELHQIVKLMTKNIINRITNQGIAVKITPAAIDVI 761
Query: 623 VEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTV 675
G++P YGARP+RRA+ LED ++E++L+ +K D V + G++T+
Sbjct: 762 AGAGFDPEYGARPIRRALQTKLEDKLSEELLSGRLKATDQVTIGA-RQGDITI 813
>gi|320533050|ref|ZP_08033786.1| negative regulator of genetic competence ClpC/MecB [Actinomyces sp.
oral taxon 171 str. F0337]
gi|320134733|gb|EFW26945.1| negative regulator of genetic competence ClpC/MecB [Actinomyces sp.
oral taxon 171 str. F0337]
Length = 866
Score = 753 bits (1944), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/670 (56%), Positives = 512/670 (76%), Gaps = 17/670 (2%)
Query: 4 ESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTK 63
E+ A G G SG+ + L+++G NLT A EGKLDPV+GR+ ++ERV+Q+L RRTK
Sbjct: 149 ETVNAGGPSKEGTPSGSAI--LDQFGRNLTAAAREGKLDPVIGRKKEMERVMQVLSRRTK 206
Query: 64 NNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERL 123
NNP LIGEPGVGKTA+ EGL+Q I GDVP+T+ K++ +LDMG LVAG++YRG+FEERL
Sbjct: 207 NNPVLIGEPGVGKTAVVEGLSQAIVHGDVPETLRDKQLYSLDMGSLVAGSRYRGDFEERL 266
Query: 124 KKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYR 183
KK+++E++ +I+LFIDE+HTL+GAGAAEGA+DAA+ILKP LARGELQ IGATTLDEYR
Sbjct: 267 KKVLKEVRTRGDIVLFIDEIHTLVGAGAAEGAVDAASILKPMLARGELQTIGATTLDEYR 326
Query: 184 KHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQY 243
K IEKD ALERRFQPV V +PS++ETI IL GLR+RYE H++ TDEA+ +AA+L+ +Y
Sbjct: 327 K-IEKDAALERRFQPVTVDQPSIEETIGILTGLRDRYEAFHRIVITDEAIEAAAKLADRY 385
Query: 244 ISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGE 303
I+DRFLPDKAIDL+DEAG+R+R+R P E RE+++++ Q+ +EK A+ QDFE+A
Sbjct: 386 INDRFLPDKAIDLVDEAGARLRIRRMTAPPELREIDEQIAQVKREKESAIDDQDFERAAS 445
Query: 304 LRDREMDLKAQISALVDKGKEMSKAETEAGDVGPV--VTEVDIQHIVSAWTGIPVEKVST 361
LRD E L + +A KE + ++GD+ V V E I +++ TGIPV K++
Sbjct: 446 LRDDERRLADERAA-----KEKA---WKSGDLDQVAEVDEALIAEVLAMSTGIPVVKLTE 497
Query: 362 DESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSE 421
ES +LL ME LHKR+IGQ++A++A+S++IRR R GLK+P RP SFIF+GPTGVGK+E
Sbjct: 498 AESAKLLNMEAELHKRIIGQNKAIEALSKSIRRTRAGLKDPKRPGGSFIFAGPTGVGKTE 557
Query: 422 LAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTV 481
LAKALA + F E+A+I+LDMSEF E+HTVS+L G+PPGYVGY EGGQLTE VRRRP++V
Sbjct: 558 LAKALAEFLFDDEDALIQLDMSEFAEKHTVSRLFGAPPGYVGYDEGGQLTEKVRRRPFSV 617
Query: 482 VLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIG 541
VLFDE+EKAHPD+FN +LQILEDG L+D++GR VDFKNT++IMT+N+GS I G+ +
Sbjct: 618 VLFDEVEKAHPDIFNSLLQILEDGHLSDAQGRVVDFKNTVIIMTTNLGSKDI---GKSVA 674
Query: 542 FDLDYDEKDS-SYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 600
E + Y +K+ V ELKQ FRPEFLNR+D++IVF QLTK EV++I D+M+
Sbjct: 675 TGFQSTESGAMDYEEMKAHVNRELKQQFRPEFLNRVDDLIVFPQLTKEEVRQIVDLMIVR 734
Query: 601 VFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEG 660
+ RL + + +++TE ++ + E G++P GARPLRRAI R +ED+++EK+L EI+ G
Sbjct: 735 LDKRLAEQQMTIELTEAAKDLLAERGFDPVLGARPLRRAIQRDIEDALSEKILFGEIERG 794
Query: 661 DSVIVDVDSD 670
V+VD + +
Sbjct: 795 QKVVVDAEGE 804
>gi|350568861|ref|ZP_08937259.1| ATP-dependent Clp protease ATP-binding subunit ClpC
[Propionibacterium avidum ATCC 25577]
gi|348661104|gb|EGY77800.1| ATP-dependent Clp protease ATP-binding subunit ClpC
[Propionibacterium avidum ATCC 25577]
Length = 843
Score = 753 bits (1944), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/673 (55%), Positives = 506/673 (75%), Gaps = 13/673 (1%)
Query: 3 GESTEAVGAGVG-GGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRR 61
G+ +A +G G + L+++G NLT A +G+LDPV+GR+ +IERV+ +L RR
Sbjct: 147 GDERQAATSGAPEAGPQQSSATILDQFGRNLTDAARDGELDPVIGREKEIERVMVVLSRR 206
Query: 62 TKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEE 121
TKNNP LIGEPGVGK+A EGLAQ I GDVP+T+ KK+ +LD+G +VAG++YRG+FEE
Sbjct: 207 TKNNPVLIGEPGVGKSACVEGLAQAIVRGDVPETLRDKKIYSLDLGSMVAGSRYRGDFEE 266
Query: 122 RLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDE 181
R+KK+++EIK +IILFIDE+HTL+GAGAAEGAIDAA++LKP LARGELQ IGATTLDE
Sbjct: 267 RMKKVLKEIKNRGDIILFIDEIHTLVGAGAAEGAIDAASMLKPMLARGELQTIGATTLDE 326
Query: 182 YRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSY 241
YRK+IEKD ALERRFQP++V EPS+ I+ILKGLR+RYE HHK+ TDEA+ SAA L+
Sbjct: 327 YRKYIEKDAALERRFQPIQVAEPSIPLAIEILKGLRDRYEAHHKITITDEAITSAANLAA 386
Query: 242 QYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKA 301
+YI DRFLPDKAIDLIDEAG+R+ +R P + RE ++ + + EK A+ QDFE+A
Sbjct: 387 RYIQDRFLPDKAIDLIDEAGARMNIRRMTAPPDLREFDERIAHVRVEKEAAIDAQDFERA 446
Query: 302 GELRDREMDLKAQISALVDKGKEMSKAETEAGD--VGPVVTEVDIQHIVSAWTGIPVEKV 359
LRD E L A+ +E + E + GD V VV +I ++S TGIPV K+
Sbjct: 447 AGLRDDEKKLLAE--------REAKEEEWKQGDESVPAVVGPDEIAEVLSGATGIPVFKL 498
Query: 360 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 419
+ +ES RLL ME+ + KR +GQ++AVKA+ R+IRR R GLK+P RP SFIF+GP+GVGK
Sbjct: 499 TEEESQRLLHMEDEIGKRYVGQEDAVKALCRSIRRTRAGLKDPKRPAGSFIFAGPSGVGK 558
Query: 420 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 479
+EL KAL + FG E+A+I LDMSE+ E+HT S++ GSPPG+VGY EGGQLTE VRR+P+
Sbjct: 559 TELTKALTEFLFGDEDALITLDMSEYSEKHTASRMFGSPPGFVGYEEGGQLTEKVRRKPF 618
Query: 480 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 539
+V+LFDEIEKAHPD+FN +LQIL++GRLTD++GR VDFKNT++++T+N+G+ I K
Sbjct: 619 SVILFDEIEKAHPDIFNSLLQILDEGRLTDAQGRVVDFKNTVIVLTTNLGTRDISK-SVN 677
Query: 540 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 599
+GF ++ +SSY ++K+ VTEELK +FRPEFLNRLDE+IVF QLT+ ++ I D+M+
Sbjct: 678 LGFS-KANDAESSYEKMKAKVTEELKGHFRPEFLNRLDEIIVFHQLTQSDILRIVDLMVD 736
Query: 600 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 659
++ +RL KD+ ++VT +E + + G++P GARPLRR I R +ED +AEK+L E+K
Sbjct: 737 QLEERLGDKDMGIEVTPAAKELLSKRGFDPLLGARPLRRTIQRDIEDVLAEKILFGEVKP 796
Query: 660 GDSVIVDVDSDGN 672
G V+VD +G+
Sbjct: 797 GQIVVVDAAPEGS 809
>gi|422528562|ref|ZP_16604544.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL053PA1]
gi|314974734|gb|EFT18829.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL053PA1]
Length = 844
Score = 753 bits (1944), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/673 (56%), Positives = 506/673 (75%), Gaps = 13/673 (1%)
Query: 3 GESTEAVGAGVG-GGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRR 61
G+ +A +G G + L+++G NLT+ A +G+LDPV+GR+ +IERV+ +L RR
Sbjct: 147 GDERQAATSGAPEAGPQQSSATILDQFGRNLTEAARDGELDPVIGREREIERVMVVLSRR 206
Query: 62 TKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEE 121
TKNNP LIGEPGVGK+A EGLAQ I GDVP+T+ KK+ +LD+G +VAG++YRG+FEE
Sbjct: 207 TKNNPVLIGEPGVGKSACVEGLAQAIVRGDVPETLRDKKIYSLDLGSMVAGSRYRGDFEE 266
Query: 122 RLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDE 181
R+KK+++EIK +IILFIDE+HTL+GAGAAEGAIDAA++LKP LARGELQ IGATTLDE
Sbjct: 267 RMKKVLKEIKNRGDIILFIDEIHTLVGAGAAEGAIDAASMLKPMLARGELQTIGATTLDE 326
Query: 182 YRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSY 241
YRK+IEKD ALERRFQP++V EPS+ I+ILKGLR+RYE HHK+ TDEA+ SAA L+
Sbjct: 327 YRKYIEKDAALERRFQPIQVDEPSIPLAIEILKGLRDRYEAHHKITITDEAITSAANLAS 386
Query: 242 QYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKA 301
+YI DRFLPDKAIDLIDEAG+R+ +R P + RE ++ + ++ EK A+ QDFE+A
Sbjct: 387 RYIQDRFLPDKAIDLIDEAGARMNIRRMTAPPDLREFDERIARVRVEKEAAIDAQDFERA 446
Query: 302 GELRDREMDLKAQISALVDKGKEMSKAETEAGD--VGPVVTEVDIQHIVSAWTGIPVEKV 359
LRD E L A+ +E + E + GD V VV +I ++S TGIPV K+
Sbjct: 447 AGLRDDEKKLLAE--------REAKEEEWKQGDESVPAVVGPDEIAEVLSGATGIPVFKL 498
Query: 360 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 419
+ +ES RLL ME+ + KR +GQ++AVKA+ R+IRR R GLK P RP SFIF+GP+GVGK
Sbjct: 499 TEEESQRLLHMEDEIGKRYVGQEDAVKALCRSIRRTRAGLKAPKRPAGSFIFAGPSGVGK 558
Query: 420 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 479
+EL KAL + FG E+A+I LDMSE+ E+HT S++ GSPPG+VGY EGGQLTE VRR+P+
Sbjct: 559 TELTKALTEFLFGDEDALITLDMSEYSEKHTASRMFGSPPGFVGYEEGGQLTEKVRRKPF 618
Query: 480 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 539
+V+LFDEIEKAHPD+FN +LQIL++GRLTD++GR VDFKNT++++T+N+G+ I K
Sbjct: 619 SVILFDEIEKAHPDIFNSLLQILDEGRLTDAQGRVVDFKNTVIVLTTNLGTRDISK-SVN 677
Query: 540 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 599
+GF D+ +SSY ++K+ VTEELK +FRPEFLNRLDE+IVF QLT+ ++ I D+M+
Sbjct: 678 LGFS-KADDVESSYEKMKAKVTEELKGHFRPEFLNRLDEIIVFHQLTQPDILRIVDLMVG 736
Query: 600 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 659
++ DRL KD+ ++VT +E + G++P GARPLRR I R +ED +AEK+L E+K
Sbjct: 737 QLEDRLADKDMGIEVTPAAKELLSTRGFDPLLGARPLRRTIQRDIEDVLAEKILFGEVKP 796
Query: 660 GDSVIVDVDSDGN 672
G V+VD +G+
Sbjct: 797 GQIVVVDAAPEGS 809
>gi|365828768|ref|ZP_09370552.1| ATP-dependent Clp protease ATP-binding subunit [Actinomyces sp.
oral taxon 849 str. F0330]
gi|365262259|gb|EHM92152.1| ATP-dependent Clp protease ATP-binding subunit [Actinomyces sp.
oral taxon 849 str. F0330]
Length = 866
Score = 753 bits (1944), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/670 (56%), Positives = 512/670 (76%), Gaps = 17/670 (2%)
Query: 4 ESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTK 63
E+ A G G SG+ + L+++G NLT A EGKLDPV+GR+ ++ERV+Q+L RRTK
Sbjct: 149 ETVNAGGPSKEGTPSGSAI--LDQFGRNLTAAAREGKLDPVIGRKKEMERVMQVLSRRTK 206
Query: 64 NNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERL 123
NNP LIGEPGVGKTA+ EGL+Q I GDVP+T+ K++ +LDMG LVAG++YRG+FEERL
Sbjct: 207 NNPVLIGEPGVGKTAVVEGLSQAIVHGDVPETLRDKQLYSLDMGSLVAGSRYRGDFEERL 266
Query: 124 KKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYR 183
KK+++E++ +I+LFIDE+HTL+GAGAAEGA+DAA+ILKP LARGELQ IGATTLDEYR
Sbjct: 267 KKVLKEVRTRGDIVLFIDEIHTLVGAGAAEGAVDAASILKPMLARGELQTIGATTLDEYR 326
Query: 184 KHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQY 243
K IEKD ALERRFQPV V +PS++ETI IL GLR+RYE H++ TDEA+ +AA+L+ +Y
Sbjct: 327 K-IEKDAALERRFQPVTVDQPSIEETIGILTGLRDRYEAFHRIVITDEAIEAAAKLADRY 385
Query: 244 ISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGE 303
I+DRFLPDKAIDL+DEAG+R+R+R P E RE+++++ ++ +EK A+ QDFE+A
Sbjct: 386 INDRFLPDKAIDLVDEAGARLRIRRMTAPPELREIDEKIAEVKREKESAIDDQDFERAAS 445
Query: 304 LRDREMDLKAQISALVDKGKEMSKAETEAGDVGPV--VTEVDIQHIVSAWTGIPVEKVST 361
LRD E L + +A KE + ++GD+ V V E I +++ TGIPV K++
Sbjct: 446 LRDDERRLGDERAA-----KEKA---WKSGDLDQVAEVDEALIAEVLAMSTGIPVVKLTE 497
Query: 362 DESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSE 421
ES +LL ME LHKR+IGQ++A++A+S++IRR R GLK+P RP SFIF+GPTGVGK+E
Sbjct: 498 AESAKLLNMESELHKRIIGQNKAIEALSKSIRRTRAGLKDPKRPGGSFIFAGPTGVGKTE 557
Query: 422 LAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTV 481
LAKALA + F E+A+I+LDMSEF E+HTVS+L G+PPGYVGY EGGQLTE VRRRP++V
Sbjct: 558 LAKALAEFLFDDEDALIQLDMSEFAEKHTVSRLFGAPPGYVGYDEGGQLTEKVRRRPFSV 617
Query: 482 VLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIG 541
VLFDE+EKAHPD+FN +LQILEDG L+D++GR VDFKNT++IMT+N+GS I G+ +
Sbjct: 618 VLFDEVEKAHPDIFNSLLQILEDGHLSDAQGRVVDFKNTVIIMTTNLGSKDI---GKSVA 674
Query: 542 FDLDYDEKDS-SYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 600
E + Y +KS V ELKQ FRPEFLNR+D++IVF QLTK EV++I D+M+
Sbjct: 675 TGFQSTESGAMDYEEMKSHVNRELKQQFRPEFLNRVDDLIVFPQLTKEEVRQIVDLMIAR 734
Query: 601 VFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEG 660
+ RL + + +++T+ +E + E G++P GARPLRRAI R +ED+++EK+L EI+ G
Sbjct: 735 LDKRLAEQQMTIELTDAAKELLAERGFDPVLGARPLRRAIQRDIEDALSEKILFGEIERG 794
Query: 661 DSVIVDVDSD 670
VIVD + +
Sbjct: 795 QKVIVDAEGE 804
>gi|406909140|gb|EKD49459.1| hypothetical protein ACD_63C00138G0006, partial [uncultured
bacterium]
Length = 870
Score = 753 bits (1943), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/651 (55%), Positives = 513/651 (78%), Gaps = 9/651 (1%)
Query: 23 PTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEG 82
P L++YG ++ ++A +GKLDPV+GR ++ RV+QIL RRTKNNP LIGEPGVGKTAIAEG
Sbjct: 206 PNLDKYGVDMAQMARDGKLDPVIGRDDEVARVIQILSRRTKNNPVLIGEPGVGKTAIAEG 265
Query: 83 LAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEI-KQSDEIILFID 141
LAQ+I +G+VP+ ++GK+VI LD+ +VAGTK+RGEFE+RLKK + +I K+ +IILFID
Sbjct: 266 LAQKIVAGNVPEILKGKRVIALDISSMVAGTKFRGEFEKRLKKAIADIQKEKGKIILFID 325
Query: 142 EVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKV 201
E+HT++GAG +EGAIDA+N+LKPSLARGELQ IGATTL+EY+K+IEKD A ERRFQP+ V
Sbjct: 326 ELHTIVGAGGSEGAIDASNMLKPSLARGELQAIGATTLNEYKKYIEKDAAFERRFQPILV 385
Query: 202 PEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAG 261
EPSV++TI IL+GLR++YE HHK +DEA+V+AA LS +Y+ DRFLPDKAIDLIDEA
Sbjct: 386 DEPSVEDTIAILRGLRDKYEAHHKTTISDEAIVAAASLSDRYLKDRFLPDKAIDLIDEAA 445
Query: 262 SRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREM-DLKAQISALVD 320
S++R+ + P E ++LEK ++ KEK + + G L+ +++ ++ +I L +
Sbjct: 446 SKIRIESLEAPAELKKLEKRIKDFEKEKAALAKTK-----GSLKRKKISEINFKIKNLKE 500
Query: 321 KGKEMSKAETEAGDVG-PVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVI 379
+ +E+ + + G P V DI+ ++S WTGIPV +++ +E D+LLK+EE LH RVI
Sbjct: 501 EKRELDGSWRKDKATGQPTVLASDIEKLISDWTGIPVSELAQEEVDKLLKLEERLHARVI 560
Query: 380 GQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIR 439
GQ+EAV+A++ A+RR R GLK+PNRPI SFIF GPTGVGK+ELA+ALA FG+E+ +IR
Sbjct: 561 GQNEAVQAVAEAVRRGRAGLKDPNRPIGSFIFLGPTGVGKTELARALAEQVFGNEDTIIR 620
Query: 440 LDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMML 499
+DMSE+ME+H+V+KL GSPPGYVGY EGGQLTE VRR+PY+V+L DEIEKAHPDVFN++L
Sbjct: 621 VDMSEYMEQHSVAKLTGSPPGYVGYEEGGQLTEKVRRKPYSVILLDEIEKAHPDVFNILL 680
Query: 500 QILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR-RIGFDLDYDEKDSSYNRIKS 558
QIL+DGRLTD+KGR VDFKNT++I TSN+GS I++ RIGFD E+ + + ++
Sbjct: 681 QILDDGRLTDAKGRAVDFKNTIIIATSNIGSQRIQEVTEGRIGFDDKVKERKADKDELRV 740
Query: 559 LVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERF 618
+ ELK+ FRPEFLNR+DE+I+F L+K E++ I D+++K+V L +++ +++T++
Sbjct: 741 ELMGELKKTFRPEFLNRVDEIIIFEALSKNEIRRIVDLLIKDVQRLLHGQNVTIKLTDKA 800
Query: 619 RERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDS 669
++++ +EGY+P++GARPL+R I + +++ ++EK+L+ + K GD++ VDV++
Sbjct: 801 KDKIAKEGYDPTFGARPLKRFIQKEIDNPLSEKLLSGKYKGGDNIEVDVEN 851
>gi|326772260|ref|ZP_08231545.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Actinomyces
viscosus C505]
gi|326638393|gb|EGE39294.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Actinomyces
viscosus C505]
Length = 866
Score = 753 bits (1943), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/670 (56%), Positives = 512/670 (76%), Gaps = 17/670 (2%)
Query: 4 ESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTK 63
E+ A G G SG+ + L+++G NLT A EGKLDPV+GR+ ++ERV+Q+L RRTK
Sbjct: 149 ETVNAGGPSKEGTPSGSAI--LDQFGRNLTAAAREGKLDPVIGRKKEMERVMQVLSRRTK 206
Query: 64 NNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERL 123
NNP LIGEPGVGKTA+ EGL+Q I GDVP+T+ K++ +LDMG LVAG++YRG+FEERL
Sbjct: 207 NNPVLIGEPGVGKTAVVEGLSQAIVHGDVPETLRDKQLYSLDMGSLVAGSRYRGDFEERL 266
Query: 124 KKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYR 183
KK+++E++ +I+LFIDE+HTL+GAGAAEGA+DAA+ILKP LARGELQ IGATTLDEYR
Sbjct: 267 KKVLKEVRTRGDIVLFIDEIHTLVGAGAAEGAVDAASILKPMLARGELQTIGATTLDEYR 326
Query: 184 KHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQY 243
K IEKD ALERRFQPV V +PS++ETI IL GLR+RYE H++ TDEA+ +AA+L+ +Y
Sbjct: 327 K-IEKDAALERRFQPVTVDQPSIEETIGILTGLRDRYEAFHRIVITDEAIEAAAKLADRY 385
Query: 244 ISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGE 303
I+DRFLPDKAIDL+DEAG+R+R+R P E RE+++++ Q+ +EK A+ QDFE+A
Sbjct: 386 INDRFLPDKAIDLVDEAGARLRIRRMTAPPELREIDEQIAQVKREKESAIDDQDFERAAS 445
Query: 304 LRDREMDLKAQISALVDKGKEMSKAETEAGDVGPV--VTEVDIQHIVSAWTGIPVEKVST 361
LRD E L + +A KE + ++GD+ V V E I +++ TGIPV K++
Sbjct: 446 LRDDERRLADERAA-----KEKA---WKSGDLDQVAEVDEALIAEVLAMSTGIPVVKLTE 497
Query: 362 DESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSE 421
ES +LL ME LHKR+IGQ++A++A+S++IRR R GLK+P RP SFIF+GPTGVGK+E
Sbjct: 498 AESAKLLNMEAELHKRIIGQNKAIEALSKSIRRTRAGLKDPKRPGGSFIFAGPTGVGKTE 557
Query: 422 LAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTV 481
LAKALA + F E+A+I+LDMSEF E+HTVS+L G+PPGYVGY EGGQLTE VRRRP++V
Sbjct: 558 LAKALAEFLFDDEDALIQLDMSEFAEKHTVSRLFGAPPGYVGYDEGGQLTEKVRRRPFSV 617
Query: 482 VLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIG 541
VLFDE+EKAHPD+FN +LQILEDG L+D++GR VDFKNT++IMT+N+GS I G+ +
Sbjct: 618 VLFDEVEKAHPDIFNSLLQILEDGHLSDAQGRVVDFKNTVIIMTTNLGSKDI---GKSVA 674
Query: 542 FDLDYDEKDS-SYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 600
E + Y +K+ V ELKQ FRPEFLNR+D++IVF QLTK EV++I D+M+
Sbjct: 675 TGFQSTESGAMDYEEMKAHVNRELKQQFRPEFLNRVDDLIVFPQLTKEEVRQIVDLMIVR 734
Query: 601 VFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEG 660
+ RL + + +++TE ++ + E G++P GARPLRRAI R +ED+++EK+L E++ G
Sbjct: 735 LDKRLAEQQMTIELTEAAKDLLAERGFDPVLGARPLRRAIQRDIEDALSEKILFGELERG 794
Query: 661 DSVIVDVDSD 670
VIVD + +
Sbjct: 795 QKVIVDAEGE 804
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.315 0.135 0.370
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,609,453,222
Number of Sequences: 23463169
Number of extensions: 463012698
Number of successful extensions: 1787581
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 13300
Number of HSP's successfully gapped in prelim test: 14533
Number of HSP's that attempted gapping in prelim test: 1700049
Number of HSP's gapped (non-prelim): 58865
length of query: 693
length of database: 8,064,228,071
effective HSP length: 150
effective length of query: 543
effective length of database: 8,839,720,017
effective search space: 4799967969231
effective search space used: 4799967969231
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 81 (35.8 bits)