BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 005511
(693 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P31541|CLPAA_SOLLC ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4A,
chloroplastic OS=Solanum lycopersicum GN=CD4A PE=3 SV=1
Length = 926
Score = 1315 bits (3402), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 651/694 (93%), Positives = 672/694 (96%), Gaps = 2/694 (0%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
MVGES+EAVGA VGGG+SG KMPTLEEYGTNLTKLAEEGKLDPVVGRQ QIERV QILGR
Sbjct: 233 MVGESSEAVGASVGGGTSGLKMPTLEEYGTNLTKLAEEGKLDPVVGRQAQIERVTQILGR 292
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNPCLIGEPGVGKTAIAEGLAQRIA+GDVP+TIEGKKVITLDMGLLVAGTKYRGEFE
Sbjct: 293 RTKNNPCLIGEPGVGKTAIAEGLAQRIANGDVPETIEGKKVITLDMGLLVAGTKYRGEFE 352
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTLD
Sbjct: 353 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLD 412
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKL YTDEA+ +AA+LS
Sbjct: 413 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLHYTDEAIEAAAKLS 472
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
+QYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK
Sbjct: 473 HQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 532
Query: 301 AGELRDREMDLKAQISALVDKGKEMSKAETEAGDV-GPVVTEVDIQHIVSAWTGIPVEKV 359
AGELRDREMDLKAQISAL+DK KE SKAE+EAGD GP+VTE DIQHIVS+WTGIPVEKV
Sbjct: 533 AGELRDREMDLKAQISALIDKNKEKSKAESEAGDAAGPIVTEADIQHIVSSWTGIPVEKV 592
Query: 360 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 419
STDESDRLLKMEETLH RVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK
Sbjct: 593 STDESDRLLKMEETLHTRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 652
Query: 420 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 479
SELAK+LA YYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY
Sbjct: 653 SELAKSLATYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 712
Query: 480 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 539
TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR
Sbjct: 713 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 772
Query: 540 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 599
IGFDLD+DEKDSSYNRIKSLVTEELKQYFRPEFLNRL EMIVFRQLTKLEVKEIADIMLK
Sbjct: 773 IGFDLDFDEKDSSYNRIKSLVTEELKQYFRPEFLNRLSEMIVFRQLTKLEVKEIADIMLK 832
Query: 600 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 659
EVF RLK K+IELQVTERFR+RVV+EGYNPSYGARPLRRAIMRLLEDSMAEKMLA EIKE
Sbjct: 833 EVFVRLKNKEIELQVTERFRDRVVDEGYNPSYGARPLRRAIMRLLEDSMAEKMLAGEIKE 892
Query: 660 GDSVIVDVDSDGNVTVLNGSSGAPESLADPLPVV 693
GDSVIVDVDSDGNVTVLNG+SGAP A P P++
Sbjct: 893 GDSVIVDVDSDGNVTVLNGTSGAPSDSA-PEPIL 925
>sp|Q9FI56|CLPC1_ARATH Chaperone protein ClpC1, chloroplastic OS=Arabidopsis thaliana
GN=CLPC1 PE=1 SV=1
Length = 929
Score = 1313 bits (3399), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 648/696 (93%), Positives = 674/696 (96%), Gaps = 5/696 (0%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
MVGE+ E V A VGGGSS NKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR
Sbjct: 234 MVGENNE-VTANVGGGSSSNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 292
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVP+TIEGKKVITLDMGLLVAGTKYRGEFE
Sbjct: 293 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPETIEGKKVITLDMGLLVAGTKYRGEFE 352
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
ERLKKLMEEI+QSDEIILFIDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTLD
Sbjct: 353 ERLKKLMEEIRQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLD 412
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRKHIEKDPALERRFQPVKVPEP+VDETIQILKGLRERYEIHHKLRYTDE+LV+AAQLS
Sbjct: 413 EYRKHIEKDPALERRFQPVKVPEPTVDETIQILKGLRERYEIHHKLRYTDESLVAAAQLS 472
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
YQYISDRFLPDKAIDLIDEAGSRVRLRHAQ+PEEARELEKELRQITKEKNEAVRGQDFEK
Sbjct: 473 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQVPEEARELEKELRQITKEKNEAVRGQDFEK 532
Query: 301 AGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVS 360
AG LRDRE++L+A++SA+ KGKEMSKAE+E G+ GP+VTE DIQHIVS+WTGIPVEKVS
Sbjct: 533 AGTLRDREIELRAEVSAIQAKGKEMSKAESETGEEGPMVTESDIQHIVSSWTGIPVEKVS 592
Query: 361 TDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 420
TDESDRLLKMEETLHKR+IGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS
Sbjct: 593 TDESDRLLKMEETLHKRIIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 652
Query: 421 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 480
ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT
Sbjct: 653 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 712
Query: 481 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI 540
VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI
Sbjct: 713 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI 772
Query: 541 GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 600
GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADI+LKE
Sbjct: 773 GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADILLKE 832
Query: 601 VFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEG 660
VF+RLK K+IELQVTERF+ERVV+EGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEG
Sbjct: 833 VFERLKKKEIELQVTERFKERVVDEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEG 892
Query: 661 DSVIVDVDSDGNVTVLNGSSGAP----ESLADPLPV 692
DSVIVDVD++GNVTVLNG SG P E D LPV
Sbjct: 893 DSVIVDVDAEGNVTVLNGGSGTPTTSLEEQEDSLPV 928
>sp|P31542|CLPAB_SOLLC ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4B,
chloroplastic OS=Solanum lycopersicum GN=CD4B PE=3 SV=1
Length = 923
Score = 1310 bits (3391), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 655/693 (94%), Positives = 675/693 (97%), Gaps = 1/693 (0%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
MVGES EAVGA VGGG+SG KMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERV QILGR
Sbjct: 231 MVGESNEAVGASVGGGTSGQKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVTQILGR 290
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNPCLIGEPGVGKTAIAEGLAQRIA+GDVP+TIEGKKVITLDMGLLVAGTKYRGEFE
Sbjct: 291 RTKNNPCLIGEPGVGKTAIAEGLAQRIANGDVPETIEGKKVITLDMGLLVAGTKYRGEFE 350
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTLD
Sbjct: 351 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLD 410
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRKHIEKDPALERRFQPVKVPEP+VDETIQILKGLRERYEIHHKLRYTDE LV+AAQLS
Sbjct: 411 EYRKHIEKDPALERRFQPVKVPEPTVDETIQILKGLRERYEIHHKLRYTDEDLVAAAQLS 470
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEA+ELEKELRQITKEKNEAVRGQDFEK
Sbjct: 471 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEAKELEKELRQITKEKNEAVRGQDFEK 530
Query: 301 AGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVS 360
AGELRDREMDLKAQI+AL+DK KE+SKAE+EA D GP+VTE DIQHIVS+WTGIPVEKVS
Sbjct: 531 AGELRDREMDLKAQITALIDKNKEVSKAESEAADTGPLVTEADIQHIVSSWTGIPVEKVS 590
Query: 361 TDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 420
TDESDRLLKMEETLH R+IGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS
Sbjct: 591 TDESDRLLKMEETLHTRIIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 650
Query: 421 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 480
ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT
Sbjct: 651 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 710
Query: 481 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI 540
VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI
Sbjct: 711 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI 770
Query: 541 GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 600
GFDLD DEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE
Sbjct: 771 GFDLDLDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 830
Query: 601 VFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEG 660
VF+RLK K+IELQVTERFR+RVV+EGYNPSYGARPLRRAIMRLLEDSMAEKMLA EIKEG
Sbjct: 831 VFERLKVKEIELQVTERFRDRVVDEGYNPSYGARPLRRAIMRLLEDSMAEKMLANEIKEG 890
Query: 661 DSVIVDVDSDGNVTVLNGSSGAPESLA-DPLPV 692
DSVIVDVDSDGNVTVLNGSSG P A +P+PV
Sbjct: 891 DSVIVDVDSDGNVTVLNGSSGTPSDPAPEPIPV 923
>sp|P35100|CLPC_PEA Chaperone protein ClpC, chloroplastic OS=Pisum sativum PE=2 SV=1
Length = 922
Score = 1309 bits (3387), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 640/692 (92%), Positives = 669/692 (96%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
MVGES ++V A VG GSS NK PTLEEYGTNLTKLAEEGKLDPVVGRQPQIERV QILGR
Sbjct: 231 MVGESADSVTATVGSGSSNNKTPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVTQILGR 290
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNPCLIGEPGVGKTAIAEGLAQRIA+GDVP+TIEGKKVITLDMGLLVAGTKYRGEFE
Sbjct: 291 RTKNNPCLIGEPGVGKTAIAEGLAQRIANGDVPETIEGKKVITLDMGLLVAGTKYRGEFE 350
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
ERLKKLMEEIKQSD+IILFIDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTLD
Sbjct: 351 ERLKKLMEEIKQSDDIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLD 410
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRKHIEKDP LERRFQPVKVPEP+VDETIQILKGLRERYEIHHKLRYTDEAL++AAQLS
Sbjct: 411 EYRKHIEKDPDLERRFQPVKVPEPTVDETIQILKGLRERYEIHHKLRYTDEALIAAAQLS 470
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
YQYISDRFLPDKAIDL+DEAGSRVRL+HAQLPEEA+EL+KE+R+I KEK E VR QDFEK
Sbjct: 471 YQYISDRFLPDKAIDLVDEAGSRVRLQHAQLPEEAKELDKEVRKIVKEKEEYVRNQDFEK 530
Query: 301 AGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVS 360
AGELRD+EMDLKAQISAL++KGKEMSKAETE D GP+VTEVDIQHIVS+WTGIPV+KVS
Sbjct: 531 AGELRDKEMDLKAQISALIEKGKEMSKAETETADEGPIVTEVDIQHIVSSWTGIPVDKVS 590
Query: 361 TDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 420
DESDRLLKME+TLHKR+IGQDEAV+AISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS
Sbjct: 591 ADESDRLLKMEDTLHKRIIGQDEAVQAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 650
Query: 421 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 480
ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT
Sbjct: 651 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 710
Query: 481 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI 540
VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI
Sbjct: 711 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI 770
Query: 541 GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 600
GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE
Sbjct: 771 GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 830
Query: 601 VFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEG 660
VF RLKTK+IELQVTERFR+RVV+EGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEG
Sbjct: 831 VFQRLKTKEIELQVTERFRDRVVDEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEG 890
Query: 661 DSVIVDVDSDGNVTVLNGSSGAPESLADPLPV 692
DSVIVDVDSDG V VLNGSSG PESL + L +
Sbjct: 891 DSVIVDVDSDGKVIVLNGSSGTPESLPEALSI 922
>sp|Q7F9I1|CLPC1_ORYSJ Chaperone protein ClpC1, chloroplastic OS=Oryza sativa subsp.
japonica GN=CLPC1 PE=2 SV=2
Length = 918
Score = 1279 bits (3309), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 637/692 (92%), Positives = 674/692 (97%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
MVGESTEAVGAGVGGGSSG KMPTLEEYGTNLTKLAEEGKLDPVVGRQ QIERV QILGR
Sbjct: 227 MVGESTEAVGAGVGGGSSGQKMPTLEEYGTNLTKLAEEGKLDPVVGRQDQIERVTQILGR 286
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNPCLIGEPGVGKTAIAEGLAQRI++GDVP+TIEGKKVITLDMGLLVAGTKYRGEFE
Sbjct: 287 RTKNNPCLIGEPGVGKTAIAEGLAQRISNGDVPETIEGKKVITLDMGLLVAGTKYRGEFE 346
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
ERLKKLMEEIKQ+D+IILFIDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTLD
Sbjct: 347 ERLKKLMEEIKQNDDIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLD 406
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRKHIEKDPALERRFQPVKVPEP+VDETIQIL+GLRERYE+HHKLRYTD++L++AAQLS
Sbjct: 407 EYRKHIEKDPALERRFQPVKVPEPTVDETIQILRGLRERYELHHKLRYTDDSLIAAAQLS 466
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLP+EA+EL+KELRQ+TK+KNEAVRGQDFEK
Sbjct: 467 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPDEAKELDKELRQVTKDKNEAVRGQDFEK 526
Query: 301 AGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVS 360
AGELRDREM+LKAQI+A++DK KEM KAETE+G+VGP+VTE DIQHIVS+WTGIPVEKVS
Sbjct: 527 AGELRDREMELKAQITAIIDKSKEMVKAETESGEVGPLVTEADIQHIVSSWTGIPVEKVS 586
Query: 361 TDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 420
+DESDRLLKMEETLH R+IGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS
Sbjct: 587 SDESDRLLKMEETLHTRIIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 646
Query: 421 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 480
ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT
Sbjct: 647 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 706
Query: 481 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI 540
VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR+I
Sbjct: 707 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRKI 766
Query: 541 GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 600
GFDLDYDEKD+SYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE
Sbjct: 767 GFDLDYDEKDTSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 826
Query: 601 VFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEG 660
VFDRLK KDI+LQVTE+FR+RVV+EGYNPSYGARPLRRAIMRLLEDS+AEKMLA E+KEG
Sbjct: 827 VFDRLKAKDIDLQVTEKFRDRVVDEGYNPSYGARPLRRAIMRLLEDSLAEKMLAGEVKEG 886
Query: 661 DSVIVDVDSDGNVTVLNGSSGAPESLADPLPV 692
DS IVDVDS+G V VLNG SG PE LA L V
Sbjct: 887 DSAIVDVDSEGKVIVLNGGSGVPEPLAPALSV 918
>sp|Q2QVG9|CLPC2_ORYSJ Chaperone protein ClpC2, chloroplastic OS=Oryza sativa subsp.
japonica GN=CLPC2 PE=2 SV=2
Length = 919
Score = 1272 bits (3291), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 631/689 (91%), Positives = 674/689 (97%), Gaps = 1/689 (0%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
M+GE+TEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR
Sbjct: 228 MIGETTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 287
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNPCLIGEPGVGKTAIAEGLAQRI++GDVP+TIEGKKVITLDMGLLVAGTKYRGEFE
Sbjct: 288 RTKNNPCLIGEPGVGKTAIAEGLAQRISTGDVPETIEGKKVITLDMGLLVAGTKYRGEFE 347
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTLD
Sbjct: 348 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLD 407
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRKHIEKDPALERRFQPV+VPEP+VDETI+IL+GLRERYEIHHKLRYTD+AL+SAA+LS
Sbjct: 408 EYRKHIEKDPALERRFQPVRVPEPTVDETIEILRGLRERYEIHHKLRYTDDALISAAKLS 467
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
YQYISDRFLPDKAIDLIDEAGSRVRLRHAQ+PEEAREL+KEL+QITK+KNEAVR QDFEK
Sbjct: 468 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQVPEEARELDKELKQITKDKNEAVRSQDFEK 527
Query: 301 AGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVS 360
AGELRDREM+LKAQI+AL+DK KEMSKAETE+G+ GP+V E DIQHIVS+WTGIPVEKVS
Sbjct: 528 AGELRDREMELKAQITALIDKSKEMSKAETESGETGPLVNEADIQHIVSSWTGIPVEKVS 587
Query: 361 TDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 420
+DESD+LLKMEETLH+RVIGQDEAVKAISR+IRRARVGLKNPNRPIASFIF+GPTGVGKS
Sbjct: 588 SDESDKLLKMEETLHQRVIGQDEAVKAISRSIRRARVGLKNPNRPIASFIFAGPTGVGKS 647
Query: 421 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 480
ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT
Sbjct: 648 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 707
Query: 481 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI 540
VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR+I
Sbjct: 708 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRKI 767
Query: 541 GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 600
GFDLDYDEKDSSY+RIKSLV EE+KQYFRPEFLNRLDEMIVFRQLTKLEVKEIA+IMLKE
Sbjct: 768 GFDLDYDEKDSSYSRIKSLVVEEMKQYFRPEFLNRLDEMIVFRQLTKLEVKEIAEIMLKE 827
Query: 601 VFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEG 660
VFDRLK KDI+LQVTE+F+ER+V+EG+NPSYGARPLRRAIMRLLEDS+AEKMLA E+KEG
Sbjct: 828 VFDRLKAKDIDLQVTEKFKERIVDEGFNPSYGARPLRRAIMRLLEDSLAEKMLAGEVKEG 887
Query: 661 DSVIVDVDSDGNVTVLNGSSGAPESLADP 689
DS IVDVDS+G V VLNG SG PE L+ P
Sbjct: 888 DSAIVDVDSEGKVIVLNGQSGLPE-LSTP 915
>sp|P46523|CLPA_BRANA ATP-dependent Clp protease ATP-binding subunit clpA homolog,
chloroplastic (Fragment) OS=Brassica napus GN=CLPA PE=2
SV=1
Length = 874
Score = 1253 bits (3241), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 627/696 (90%), Positives = 658/696 (94%), Gaps = 7/696 (1%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
MVGE+ E V A VGGGS NKMPTLEEYGTNLTKLAEEGKLDPVVGR PQIERVVQILGR
Sbjct: 181 MVGENNE-VTANVGGGSGTNKMPTLEEYGTNLTKLAEEGKLDPVVGRHPQIERVVQILGR 239
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNPCLIGEPGVGKTAIAEGLAQRIASG V +T EGKKVITLDMGLL AGTKYRGEFE
Sbjct: 240 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGVVRETSEGKKVITLDMGLLAAGTKYRGEFE 299
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
ER+KKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTLD
Sbjct: 300 ERVKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLD 359
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRKHIEKDPALERRFQPVKVPEP+VDETIQILKGLRERYEIHHKLRYTDE+LV+AAQLS
Sbjct: 360 EYRKHIEKDPALERRFQPVKVPEPTVDETIQILKGLRERYEIHHKLRYTDESLVAAAQLS 419
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
YQYISDRFLPD+AIDL+DEAGSRVRLRHAQ+PEEARELEKELRQITKE NEAVRGQDFEK
Sbjct: 420 YQYISDRFLPDRAIDLMDEAGSRVRLRHAQVPEEARELEKELRQITKE-NEAVRGQDFEK 478
Query: 301 AGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVS 360
AG LRDRE++L+A++SA+ KGKEMSKAE+E GD GP+VTE DIQHIVS+WTGI VEKVS
Sbjct: 479 AGTLRDREIELRAEVSAIQAKGKEMSKAESETGDEGPMVTESDIQHIVSSWTGILVEKVS 538
Query: 361 TDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 420
TDESD LLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIF GPTGVGKS
Sbjct: 539 TDESDLLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFFGPTGVGKS 598
Query: 421 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 480
ELAKALAAYYFG EEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTE QLTEAVRRRPYT
Sbjct: 599 ELAKALAAYYFGCEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEPPQLTEAVRRRPYT 658
Query: 481 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI 540
VVLFDEIEKAHPDVFNMMLQILEDGRLT+SKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI
Sbjct: 659 VVLFDEIEKAHPDVFNMMLQILEDGRLTNSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI 718
Query: 541 GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 600
GFDLDY EKDSSYNRIKSLVT+ELKQYFRPEFLNRLDEMI+FRQLTKLEVKEIADI+L+E
Sbjct: 719 GFDLDY-EKDSSYNRIKSLVTQELKQYFRPEFLNRLDEMILFRQLTKLEVKEIADILLQE 777
Query: 601 VFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEG 660
+F+RLK K++ELQVTERF+ERVV+EGYNPSYGARPLRRAIMRLLEDSM EKMLAREIKEG
Sbjct: 778 LFERLKKKEVELQVTERFKERVVDEGYNPSYGARPLRRAIMRLLEDSMEEKMLAREIKEG 837
Query: 661 DSVIVDVDSDGNVTVLNGSSGAP----ESLADPLPV 692
DSVIVDVDS+G VTVLNG SG P E D LPV
Sbjct: 838 DSVIVDVDSEGKVTVLNGGSGTPTTSLEEQEDSLPV 873
>sp|Q9SXJ7|CLPC2_ARATH Chaperone protein ClpC2, chloroplastic OS=Arabidopsis thaliana
GN=CLPC2 PE=2 SV=1
Length = 952
Score = 1241 bits (3210), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 613/699 (87%), Positives = 661/699 (94%), Gaps = 6/699 (0%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
MVGE+ E + GG S +KMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQIL R
Sbjct: 254 MVGENNEVTASVGGGSSGNSKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILAR 313
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVP+TIEGK VITLDMGLLVAGTKYRGEFE
Sbjct: 314 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPETIEGKTVITLDMGLLVAGTKYRGEFE 373
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
ERLKKLMEEI+QSDEIILFIDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATT+D
Sbjct: 374 ERLKKLMEEIRQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTID 433
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRKHIEKDPALERRFQPVKVPEP+V+E IQIL+GLRERYEIHHKLRYTDEALV+AAQLS
Sbjct: 434 EYRKHIEKDPALERRFQPVKVPEPTVEEAIQILQGLRERYEIHHKLRYTDEALVAAAQLS 493
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
+QYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEK+LRQITKEKNEAVR QDFE
Sbjct: 494 HQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKQLRQITKEKNEAVRSQDFEM 553
Query: 301 AGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVS 360
AG RDRE++LKA+I+ ++ +GKE++KAE EA + GP VTE DIQHIV+ WTGIPVEKVS
Sbjct: 554 AGSHRDREIELKAEIANVLSRGKEVAKAENEAEEGGPTVTESDIQHIVATWTGIPVEKVS 613
Query: 361 TDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 420
+DES RLL+ME+TLH RVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS
Sbjct: 614 SDESSRLLQMEQTLHTRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 673
Query: 421 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 480
ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT
Sbjct: 674 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 733
Query: 481 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI 540
+VLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI
Sbjct: 734 LVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI 793
Query: 541 GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 600
GFDLD+DEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE
Sbjct: 794 GFDLDHDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 853
Query: 601 VFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEG 660
V RL+ K+IELQVTERF+ERVV+EG++PSYGARPLRRAIMRLLEDSMAEKML+R+IKEG
Sbjct: 854 VVARLEVKEIELQVTERFKERVVDEGFDPSYGARPLRRAIMRLLEDSMAEKMLSRDIKEG 913
Query: 661 DSVIVDVDSDGNVTVLNGSSG------APESLADPLPVV 693
DSVIVDVD++G+V VL+G++G A E++ DP+P++
Sbjct: 914 DSVIVDVDAEGSVVVLSGTTGRVGGFAAEEAMEDPIPIL 952
>sp|Q53LY0|CLPC3_ORYSJ Chaperone protein ClpC3, chloroplastic OS=Oryza sativa subsp.
japonica GN=CLPC3 PE=2 SV=1
Length = 932
Score = 1078 bits (2789), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 535/687 (77%), Positives = 610/687 (88%), Gaps = 2/687 (0%)
Query: 4 ESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTK 63
E + V A VGGGSS K+PTL EYGTNLTKLAEEGKLDPVVGRQ Q++RVVQILGRRTK
Sbjct: 243 EDHQPVSAAVGGGSSTTKIPTLLEYGTNLTKLAEEGKLDPVVGRQNQVDRVVQILGRRTK 302
Query: 64 NNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERL 123
NNPCLIGEPGVGKTAIAEGLAQRIA+G+VP+TI+GK VITLDMGLLVAGTKYRGEFEERL
Sbjct: 303 NNPCLIGEPGVGKTAIAEGLAQRIAAGNVPETIDGKTVITLDMGLLVAGTKYRGEFEERL 362
Query: 124 KKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYR 183
KKLM+E+KQ+ EIILF+DEVHTL+GAGAAEGAIDAANILKP+LARGELQCIGATT+DEYR
Sbjct: 363 KKLMDEVKQNGEIILFLDEVHTLVGAGAAEGAIDAANILKPALARGELQCIGATTIDEYR 422
Query: 184 KHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQY 243
KHIEKDPALERRFQPVKVPEP+VDETI ILKGLRERYEIHHK++YTDE+L++AA+LSYQY
Sbjct: 423 KHIEKDPALERRFQPVKVPEPTVDETIGILKGLRERYEIHHKVQYTDESLIAAARLSYQY 482
Query: 244 ISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGE 303
ISDRFLPDKAIDL+DEAGS VRLR+AQLP+EA+ELEK+L++I EK+EA+R QDFEKAG
Sbjct: 483 ISDRFLPDKAIDLVDEAGSLVRLRNAQLPDEAKELEKKLKKIMAEKSEAIRSQDFEKAGA 542
Query: 304 LRDREMDLKAQISALVDKGKEMSKAETEAGDV-GPVVTEVDIQHIVSAWTGIPVEKVSTD 362
LR E++LK++I +LVDK KEMSKA ++G+ GP VTE D+QHIVS+WTG+PVEKV+ D
Sbjct: 543 LRGEEVELKSEIMSLVDKSKEMSKAAVDSGESPGPTVTEADVQHIVSSWTGVPVEKVTVD 602
Query: 363 ESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSEL 422
ES RLL ME +LH+R++GQDEAV AISRAIRRARVGL++P RPIASFIF+GPTGVGKSEL
Sbjct: 603 ESSRLLAMESSLHRRIVGQDEAVTAISRAIRRARVGLRDPRRPIASFIFAGPTGVGKSEL 662
Query: 423 AKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVV 482
AKALAAYY+GS EAM+RLDMSEFME+HTV+KL+GSPPGYVGY EGGQLTEA+RRRPY VV
Sbjct: 663 AKALAAYYYGSPEAMVRLDMSEFMEKHTVAKLVGSPPGYVGYAEGGQLTEAIRRRPYAVV 722
Query: 483 LFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGF 542
LFDE+EKAHPDVFNMMLQIL+DGRLTDSKGRTVDFKN+L+IMTSNVGS VIEKGGR++
Sbjct: 723 LFDEVEKAHPDVFNMMLQILDDGRLTDSKGRTVDFKNSLIIMTSNVGSGVIEKGGRQL-G 781
Query: 543 DLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVF 602
D Y IK++V EE+K+YFRPEFLNRLDEMIVFRQLTKLEVKEIA IML EV
Sbjct: 782 FAGDGSGDGGYGVIKNMVEEEMKRYFRPEFLNRLDEMIVFRQLTKLEVKEIAGIMLAEVT 841
Query: 603 DRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDS 662
R+ K I LQVTERF+E VVE+G++PSYGARPLRRAIMRLLED++ +KMLA EI GDS
Sbjct: 842 GRIGGKGIGLQVTERFKELVVEQGFDPSYGARPLRRAIMRLLEDTLTDKMLAGEICAGDS 901
Query: 663 VIVDVDSDGNVTVLNGSSGAPESLADP 689
VIVD D DGNV V+ S L P
Sbjct: 902 VIVDADGDGNVVVVGRRSAGLPDLKSP 928
>sp|Q1XDF4|CLPC_PORYE ATP-dependent Clp protease ATP-binding subunit clpA homolog
OS=Porphyra yezoensis GN=clpC PE=3 SV=1
Length = 821
Score = 1009 bits (2609), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 496/678 (73%), Positives = 586/678 (86%), Gaps = 4/678 (0%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
M+GE+ EA +G + +K PTLEE+G+NLT++A EG LDPVVGRQ +IERV+QILGR
Sbjct: 141 MLGENAEANVSGSNTTQARSKTPTLEEFGSNLTQMAMEGGLDPVVGRQKEIERVIQILGR 200
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNP LIGEPGVGKTAIAEGLAQRIA+ DVP +E K VITLD+GLLVAGTKYRGEFE
Sbjct: 201 RTKNNPVLIGEPGVGKTAIAEGLAQRIANRDVPSILEDKLVITLDVGLLVAGTKYRGEFE 260
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
ERLK++M+EIK +D +IL IDEVHTLIGAGAAEGAIDAAN+LKP+LARGELQCIGATTL+
Sbjct: 261 ERLKRIMDEIKSADNVILVIDEVHTLIGAGAAEGAIDAANLLKPALARGELQCIGATTLE 320
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRKHIEKDPALERRFQPV V EPSV+ETI+IL GLR+RYE HH+L +D AL +AA+ +
Sbjct: 321 EYRKHIEKDPALERRFQPVVVGEPSVEETIEILFGLRDRYEKHHQLTMSDGALAAAAKYA 380
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
QYISDRFLPDKAIDLIDEAGSRVRL ++QLP AREL+KELR + K K+EA+R Q +E
Sbjct: 381 NQYISDRFLPDKAIDLIDEAGSRVRLLNSQLPPAARELDKELRAVLKTKDEAIRAQKYET 440
Query: 301 AGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVS 360
A + R REM++KAQI+A+ K E PVVTE DI IV+AWTGIPV K++
Sbjct: 441 AEQYRAREMEIKAQIAAIAQSKKNEPDLNLE----DPVVTEDDIAEIVAAWTGIPVTKLT 496
Query: 361 TDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 420
ES++L+ MEETLH R+IGQDEAV A+SRAIRRARVGLKNPNRPIASFIFSGPTGVGK+
Sbjct: 497 KSESEKLMHMEETLHGRIIGQDEAVVAVSRAIRRARVGLKNPNRPIASFIFSGPTGVGKT 556
Query: 421 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 480
EL KALA+Y+FGSE +MIRLDMSE+MERHTVSKLIGSPPGYVGY+EGG LTEAVR++PYT
Sbjct: 557 ELTKALASYFFGSEASMIRLDMSEYMERHTVSKLIGSPPGYVGYSEGGYLTEAVRKKPYT 616
Query: 481 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI 540
V+LFDEIEKAHPD+FN++LQILEDGRLTD+KGRT+DFKNTLLIMTSN+GS VIEKGG +
Sbjct: 617 VILFDEIEKAHPDIFNLLLQILEDGRLTDAKGRTIDFKNTLLIMTSNIGSKVIEKGGGSL 676
Query: 541 GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 600
GF+L D+ +S Y R++SLV EELKQYFRPEFLNRLDE+IVFRQLTK EV+EIA++ML E
Sbjct: 677 GFELSEDQTESQYTRVRSLVNEELKQYFRPEFLNRLDEIIVFRQLTKDEVREIAELMLNE 736
Query: 601 VFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEG 660
VF R+K +DI+L VTERF++R+VEEGYNPSYGARPLRRA+MRLLEDS+AE++L+ +IK G
Sbjct: 737 VFARIKQQDIQLNVTERFKQRLVEEGYNPSYGARPLRRAVMRLLEDSLAEEVLSGKIKAG 796
Query: 661 DSVIVDVDSDGNVTVLNG 678
DS +VDV ++G VTVL G
Sbjct: 797 DSAVVDVTNEGEVTVLLG 814
>sp|P51332|CLPC_PORPU ATP-dependent Clp protease ATP-binding subunit clpA homolog
OS=Porphyra purpurea GN=clpC PE=3 SV=1
Length = 821
Score = 1004 bits (2595), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 495/678 (73%), Positives = 585/678 (86%), Gaps = 4/678 (0%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
M+GE+ EA +G + +K PTLEE+G+NLT++A EG LDPVVGRQ +IERV+QILGR
Sbjct: 141 MLGENAEANVSGSNATQARSKTPTLEEFGSNLTQMAIEGGLDPVVGRQKEIERVIQILGR 200
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNP LIGEPGVGKTAIAEGLAQRIA+ DVP +E K VITLD+GLLVAGTKYRGEFE
Sbjct: 201 RTKNNPVLIGEPGVGKTAIAEGLAQRIANRDVPSILEDKLVITLDVGLLVAGTKYRGEFE 260
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
ERLK++M+EIK +D +IL IDEVHTLIGAGAAEGAIDAAN+LKP+LARGELQCIGATTL+
Sbjct: 261 ERLKRIMDEIKSADNVILVIDEVHTLIGAGAAEGAIDAANLLKPALARGELQCIGATTLE 320
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRKHIEKDPALERRF PV V EPSV+ETI+IL GLR+RYE HH+L +D AL +AA+ +
Sbjct: 321 EYRKHIEKDPALERRFHPVVVGEPSVEETIEILFGLRDRYEKHHQLTMSDGALAAAAKYA 380
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
QYISDRFLPDKAIDLIDEAGSRVRL ++QLP AREL+KELR + K K+EA+R Q +E
Sbjct: 381 NQYISDRFLPDKAIDLIDEAGSRVRLLNSQLPPAARELDKELRAVLKTKDEAIRAQKYET 440
Query: 301 AGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVS 360
A + R REM++KAQI+A+ K E PVVTE DI IV+AWTGIPV K++
Sbjct: 441 AEQYRAREMEIKAQIAAIAQSKKNEPDLNLE----DPVVTEDDIAEIVAAWTGIPVTKLT 496
Query: 361 TDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 420
ES++L++MEETLH R+IGQDEAV A+SRAIRRARVGLKNPNRPIASFIFSGPTGVGK+
Sbjct: 497 KSESEKLMQMEETLHGRIIGQDEAVIAVSRAIRRARVGLKNPNRPIASFIFSGPTGVGKT 556
Query: 421 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 480
EL KALA+Y+FGSE +MIRLDMSE+MERHTVSKLIGSPPGYVGY+EGG LTEAVR++PYT
Sbjct: 557 ELTKALASYFFGSEASMIRLDMSEYMERHTVSKLIGSPPGYVGYSEGGYLTEAVRKKPYT 616
Query: 481 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI 540
V+LFDEIEKAHPD+FN++LQILEDGRLTD+KGRT+DFKNTLLIMTSN+GS VIEKGG +
Sbjct: 617 VILFDEIEKAHPDIFNLLLQILEDGRLTDAKGRTIDFKNTLLIMTSNIGSKVIEKGGGSL 676
Query: 541 GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 600
GF+L D+ +S Y R++SLV EELKQYFRPEFLNRLDE+IVFRQLTK EV+EIA++ML E
Sbjct: 677 GFELSEDQTESQYTRVRSLVNEELKQYFRPEFLNRLDEIIVFRQLTKDEVREIAELMLNE 736
Query: 601 VFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEG 660
VF R+K +DI+L VTERF+ER+VEEGYNPSYGARPLRRA+MRLLEDS+AE++L+ +IK G
Sbjct: 737 VFARIKQQDIQLNVTERFKERLVEEGYNPSYGARPLRRAVMRLLEDSLAEEVLSGKIKAG 796
Query: 661 DSVIVDVDSDGNVTVLNG 678
DS +VDV ++G V VL G
Sbjct: 797 DSPVVDVTNEGEVKVLLG 814
>sp|Q9TM05|CLPC_CYACA ATP-dependent Clp protease ATP-binding subunit clpA homolog
OS=Cyanidium caldarium GN=clpC PE=3 SV=1
Length = 854
Score = 1001 bits (2588), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 485/681 (71%), Positives = 590/681 (86%), Gaps = 5/681 (0%)
Query: 1 MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR 60
M+GE++E VG S +K+PTLEE+GTNLT++A EGKLDPVVGR +IERVVQILGR
Sbjct: 172 MIGETSEV---SVGATSGRSKVPTLEEFGTNLTQMAVEGKLDPVVGRAKEIERVVQILGR 228
Query: 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120
RTKNNP LIGEPGVGKTAIAEGLAQRI + +VPDT+E KKVITLD+ LLVAGTKYRGEFE
Sbjct: 229 RTKNNPVLIGEPGVGKTAIAEGLAQRIINNEVPDTLEDKKVITLDVSLLVAGTKYRGEFE 288
Query: 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
ERLKK+M+EI+ +D +IL IDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTL+
Sbjct: 289 ERLKKIMDEIRMADNVILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLE 348
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
EYRKHIEKD ALERRFQPV V EP+V+ETI+IL+GLR+RYE HH+L+ +D A+V+AA+LS
Sbjct: 349 EYRKHIEKDAALERRFQPVMVEEPTVEETIEILRGLRDRYEAHHRLKISDSAIVAAAKLS 408
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEK 300
QYI+DRFLPDKAIDL+DEA SRVRL + +LP A L++ELR I K KNE +R DFE+
Sbjct: 409 DQYIADRFLPDKAIDLVDEASSRVRLMNYKLPPSAEYLDEELRHIQKIKNELIRSGDFEE 468
Query: 301 AGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVS 360
A + R+RE+++K Q++AL+ KE E E P+V E DI +IVS+WTGIPV K++
Sbjct: 469 ASQFREREIEVKVQMAALMKAKKE--AIEEELALNPPIVNEDDIANIVSSWTGIPVSKLT 526
Query: 361 TDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS 420
ES++LL MEETLH R++GQ+EAV A+S+AIRRARVGLKNPNRPIASFIFSGPTGVGK+
Sbjct: 527 KSESEKLLHMEETLHSRIVGQNEAVIAVSKAIRRARVGLKNPNRPIASFIFSGPTGVGKT 586
Query: 421 ELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYT 480
EL KA+A+Y+FGSEEAM+RLDMSE+MERHTVSKLIGSPPGYVGY EGGQLTEAVR+RPYT
Sbjct: 587 ELTKAMASYFFGSEEAMVRLDMSEYMERHTVSKLIGSPPGYVGYNEGGQLTEAVRKRPYT 646
Query: 481 VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRI 540
VVLFDEIEKAHPDVFN++LQILEDGRLTDSKGRT+DFKNTLLIMTSN+GS VIEK G +
Sbjct: 647 VVLFDEIEKAHPDVFNLLLQILEDGRLTDSKGRTIDFKNTLLIMTSNIGSKVIEKKGGGL 706
Query: 541 GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 600
GF+L+ + ++ Y+R+++LV EELKQYFRPEFLNR+DE+IVFRQLTK EV++IA IML+E
Sbjct: 707 GFELEENIEELQYSRMRNLVNEELKQYFRPEFLNRVDEIIVFRQLTKDEVRDIAHIMLRE 766
Query: 601 VFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEG 660
+F+R+K + I LQVTERF+ ++EEGYNPSYGARPLRRA++RLLEDS+AE++L+ +IKEG
Sbjct: 767 IFERVKQQGISLQVTERFKNLLIEEGYNPSYGARPLRRALVRLLEDSLAEEVLSGKIKEG 826
Query: 661 DSVIVDVDSDGNVTVLNGSSG 681
D+ ++DVD + V +L G+S
Sbjct: 827 DNAMIDVDENKQVKILLGNSN 847
>sp|O78410|CLPC_GUITH ATP-dependent Clp protease ATP-binding subunit clpA homolog
OS=Guillardia theta GN=clpC PE=3 SV=1
Length = 819
Score = 996 bits (2576), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 488/646 (75%), Positives = 566/646 (87%), Gaps = 8/646 (1%)
Query: 16 GSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVG 75
G + K PTLEE+G+NLT+ A EGKLDPV+GRQ +IERV+QILGRRTKNNP LIGEPGVG
Sbjct: 153 GQTKGKTPTLEEFGSNLTQKAAEGKLDPVIGRQKEIERVIQILGRRTKNNPILIGEPGVG 212
Query: 76 KTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDE 135
KTAIAEGLAQRI + DVPD +E K+V+TLD+GLLVAGTKYRGEFEERLKK+++EI+ ++
Sbjct: 213 KTAIAEGLAQRINNRDVPDILEDKRVVTLDIGLLVAGTKYRGEFEERLKKIIDEIRVANN 272
Query: 136 IILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERR 195
+IL IDEVHTLIGAGAAEGAIDAANILKP+LARGE+QCIGATTL+EYRKHIEKD ALERR
Sbjct: 273 VILVIDEVHTLIGAGAAEGAIDAANILKPALARGEMQCIGATTLEEYRKHIEKDSALERR 332
Query: 196 FQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAID 255
FQPV V EPSV+ETI+IL GLR+RYE HHKL +DEAL +AA+ + QYI+DRFLPDKAID
Sbjct: 333 FQPVMVGEPSVEETIEILYGLRDRYEKHHKLVISDEALSAAAKFADQYIADRFLPDKAID 392
Query: 256 LIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQI 315
LIDEAGSRVRL ++QLP AREL+KELR+I K+K+EAVR QDFE AG+LRDREM++KAQI
Sbjct: 393 LIDEAGSRVRLMNSQLPPAARELDKELREILKQKDEAVRSQDFETAGQLRDREMEIKAQI 452
Query: 316 SALVD--KGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEET 373
+A+ KG E + E VVTE DI IV+AWTGIPV K++ ES++LL+MEET
Sbjct: 453 AAIAHSKKGDEENTKEV------SVVTEEDIAQIVAAWTGIPVNKMTRSESEKLLQMEET 506
Query: 374 LHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGS 433
LH R+IGQDEAV A+S+AIRRARVGLKNPNRPIASFIFSGPTGVGK+EL KALA+Y+FGS
Sbjct: 507 LHGRIIGQDEAVVAVSKAIRRARVGLKNPNRPIASFIFSGPTGVGKTELTKALASYFFGS 566
Query: 434 EEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPD 493
EEAM+RLDMSE+MERHTVSKLIGSPPGYVGY EGGQLTE+VRRRPYTVVLFDEIEK HPD
Sbjct: 567 EEAMVRLDMSEYMERHTVSKLIGSPPGYVGYNEGGQLTESVRRRPYTVVLFDEIEKGHPD 626
Query: 494 VFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSY 553
VFN++LQILEDGRLTDSKGRTVDFKNTLLI+TSNVGS VIEKGG +GFDL D+ +S Y
Sbjct: 627 VFNLLLQILEDGRLTDSKGRTVDFKNTLLILTSNVGSKVIEKGGGGLGFDLSEDQTESQY 686
Query: 554 NRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQ 613
RIK+LV EELKQYFRPEFLNRLDE+IVFRQLTK EV EIA+IMLKEVF R+ K I+L+
Sbjct: 687 GRIKALVNEELKQYFRPEFLNRLDEIIVFRQLTKDEVGEIAEIMLKEVFTRISEKGIQLE 746
Query: 614 VTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 659
VT RF+ ++ EGYNP YGARPLRRA+MRLLED+++E+ LA +IKE
Sbjct: 747 VTARFKTHLINEGYNPIYGARPLRRAVMRLLEDTLSEEFLAEKIKE 792
>sp|Q53N47|CLPC4_ORYSJ Chaperone protein ClpC4, chloroplastic OS=Oryza sativa subsp.
japonica GN=CPLC4 PE=3 SV=1
Length = 918
Score = 930 bits (2403), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 454/671 (67%), Positives = 563/671 (83%), Gaps = 18/671 (2%)
Query: 11 AGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIG 70
A V + G K+ TL EYGTNLTKLAEEGKLDPVVGRQ QI+ VVQIL RRTKNNPCLIG
Sbjct: 252 AAVRRATRGAKLATLMEYGTNLTKLAEEGKLDPVVGRQKQIDHVVQILSRRTKNNPCLIG 311
Query: 71 EPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEI 130
EPGVGKTAIAEGLAQ IA+GDVP+TI+ K VI+LDMGLL+AGTKYRGE EERLK ++EEI
Sbjct: 312 EPGVGKTAIAEGLAQLIATGDVPETIQQKTVISLDMGLLLAGTKYRGELEERLKNILEEI 371
Query: 131 KQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDP 190
KQ+ EIILF+DEVHTL+ AG+AEGAIDAANI KP+LARGELQCIGATT++EYRKHIEKD
Sbjct: 372 KQNGEIILFLDEVHTLVTAGSAEGAIDAANIFKPALARGELQCIGATTINEYRKHIEKDA 431
Query: 191 ALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLP 250
ALERRFQPVK+PE +VDET+ ILKGLRERY+ HHK++YTDEALV+AA+LS+++I DRFLP
Sbjct: 432 ALERRFQPVKIPESTVDETVGILKGLRERYQGHHKVQYTDEALVAAAELSHKHIRDRFLP 491
Query: 251 DKAIDLIDEAGSRVRLRHAQL--PEEARELEKELRQITKEKNEAVRGQDFEKAGELRDRE 308
DKAIDL+DEAGS VRLR+AQ ++ +LE EL++ KEKN+A+ Q+F +A +LRD E
Sbjct: 492 DKAIDLMDEAGSIVRLRNAQCKPSKKVNDLEAELKKTLKEKNDAISIQNFRRAKQLRDHE 551
Query: 309 MDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLL 368
+ L+ ISAL DK +M + + A PVVTE D++H +S WTG+P+ KVS DES +LL
Sbjct: 552 LQLRTNISALTDKKTQMMEPDAIA---MPVVTEDDVRHAISRWTGVPLHKVSMDESRKLL 608
Query: 369 KMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAA 428
K+EE LH+RV+GQ EAV A+SRAIRRAR+GLK+P RP+AS +F+GPTGVGKSELAKALAA
Sbjct: 609 KLEEALHRRVVGQGEAVAAVSRAIRRARLGLKHPGRPVASLVFAGPTGVGKSELAKALAA 668
Query: 429 YYFGSEE----AMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLF 484
YY+GS E AM+RLDMSE+ME+H V++L+GSPPGYV + EGGQLTEAVRRRP+ VVL
Sbjct: 669 YYYGSSESEEAAMVRLDMSEYMEKHAVARLVGSPPGYVWHGEGGQLTEAVRRRPHAVVLL 728
Query: 485 DEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDL 544
DE+EKAH DVF+++LQ+L+DGRLTD KGRTVDFKNTL++MT+N+GSS+I
Sbjct: 729 DEVEKAHRDVFDLLLQVLDDGRLTDGKGRTVDFKNTLIVMTTNIGSSLIVN--------- 779
Query: 545 DYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDR 604
+ + ++ RIK+ VT+E+K++FRPEFLNRLDE+I+F+ LT+LEV +IA IML+E R
Sbjct: 780 NGGDGAAAAGRIKNTVTDEMKRHFRPEFLNRLDEVIMFQPLTELEVGKIAGIMLEEFAGR 839
Query: 605 LKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVI 664
++ K I+L+VT++FRE VVEEG++PSYGARPLRRA++RLLED++AEKMLA E++EGDSVI
Sbjct: 840 VREKGIKLKVTDKFRELVVEEGFDPSYGARPLRRAVVRLLEDTLAEKMLAGEVREGDSVI 899
Query: 665 VDVDSDGNVTV 675
VD DS GN V
Sbjct: 900 VDADSAGNAVV 910
>sp|Q8EU05|CLPB_OCEIH Chaperone protein ClpB OS=Oceanobacillus iheyensis (strain DSM
14371 / JCM 11309 / KCTC 3954 / HTE831) GN=clpB PE=3
SV=1
Length = 809
Score = 831 bits (2147), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/671 (60%), Positives = 525/671 (78%), Gaps = 9/671 (1%)
Query: 6 TEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNN 65
++A G G S PTL+ +LT A+EGK+DPV+GR +IERV+Q+L RRTKNN
Sbjct: 147 SQAGRQGRSGQQSNASTPTLDSLARDLTVSAKEGKIDPVIGRSKEIERVIQVLSRRTKNN 206
Query: 66 PCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKK 125
P LIGEPGVGKTA+AEGLAQ+I +VP+T+ K+V+TLDMG +VAGTKYRGEFE+RLKK
Sbjct: 207 PVLIGEPGVGKTAVAEGLAQQIIDNEVPETLRDKRVMTLDMGTVVAGTKYRGEFEDRLKK 266
Query: 126 LMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKH 185
+MEEI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTLDEYRK+
Sbjct: 267 VMEEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEYRKY 326
Query: 186 IEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYIS 245
IEKD ALERRFQP++V EP+++ETIQIL GLR+RYE HH++ TDEA+ +AA LS +YI+
Sbjct: 327 IEKDAALERRFQPIQVDEPTLEETIQILNGLRDRYEAHHRVTITDEAIEAAASLSDRYIT 386
Query: 246 DRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELR 305
DRFLPDKAIDLIDEAGS+VRLR +P +ELE++L ++ KEK+ AV+ Q+FEKA LR
Sbjct: 387 DRFLPDKAIDLIDEAGSKVRLRSYTVPPNLKELEQKLDEVRKEKDAAVQSQEFEKAASLR 446
Query: 306 DREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESD 365
D E + ++ ++ KE + G VT DI +VS WTG+PV K++ DE+D
Sbjct: 447 DSEQRFREELETTKNQWKE------KQGQTDSEVTMEDIAAVVSTWTGVPVSKLTKDETD 500
Query: 366 RLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKA 425
RLL ME+ LH RVIGQ EAV A+++AIRRAR GLK+P RPI SFIF GPTGVGK+ELA+A
Sbjct: 501 RLLNMEKILHDRVIGQSEAVNAVAKAIRRARAGLKDPKRPIGSFIFLGPTGVGKTELARA 560
Query: 426 LAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFD 485
LA F E+AMIR+DMSE+MERH S+L+GSPPGYVGY EGGQLTE VRR+PY+VVL D
Sbjct: 561 LAEVMFADEDAMIRIDMSEYMERHATSRLVGSPPGYVGYDEGGQLTEKVRRKPYSVVLLD 620
Query: 486 EIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLD 545
E+EKAHP+VFN++LQ+LEDGRLTDSKGR VDF+NT++IMTSNVG+S +++ + +GF LD
Sbjct: 621 EVEKAHPEVFNILLQVLEDGRLTDSKGRVVDFRNTVIIMTSNVGASELKR-NKYVGFALD 679
Query: 546 YDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRL 605
+EKD Y +KS V EELK+ FRPEFLNR+DE IVF L K +K+I +M++++ RL
Sbjct: 680 NEEKD--YKDMKSKVIEELKKAFRPEFLNRIDETIVFHSLEKEHMKDIVTLMVQQLQKRL 737
Query: 606 KTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIV 665
K +D+ L +T++ E++ EG++P YGARPLRR+I + +ED ++E++L I++ V +
Sbjct: 738 KEQDLHLSLTDKAIEKIANEGFDPEYGARPLRRSIQKNIEDLLSEELLRGAIEKEQQVKI 797
Query: 666 DVDSDGNVTVL 676
+++ G VL
Sbjct: 798 GLNNKGEFIVL 808
>sp|Q4L3I4|CLPC_STAHJ ATP-dependent Clp protease ATP-binding subunit ClpC
OS=Staphylococcus haemolyticus (strain JCSC1435) GN=clpC
PE=3 SV=1
Length = 824
Score = 807 bits (2085), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 388/655 (59%), Positives = 512/655 (78%), Gaps = 9/655 (1%)
Query: 16 GSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVG 75
+ N PTL+ +LT +A++G LDPVVGR +I RV+++L RRTKNNP LIGEPGVG
Sbjct: 154 ANKSNNTPTLDGLARDLTVIAKDGTLDPVVGRDKEITRVIEVLSRRTKNNPVLIGEPGVG 213
Query: 76 KTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDE 135
KTAIAEGLAQ I + +VP+T++GK+V++LDMG +VAGTKYRGEFEERLKK+MEEI Q+
Sbjct: 214 KTAIAEGLAQAIVNNEVPETLKGKRVMSLDMGTVVAGTKYRGEFEERLKKVMEEIHQAGN 273
Query: 136 IILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERR 195
+ILFIDE+HTL+GAG AEGAIDA+NILKP+LARGELQCIGATTLDEYRK+IEKD ALERR
Sbjct: 274 VILFIDELHTLVGAGGAEGAIDASNILKPALARGELQCIGATTLDEYRKNIEKDAALERR 333
Query: 196 FQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAID 255
FQP++V EP+V++TI ILKGLR+RYE HH++ +DEAL +AA+LS Y+SDRFLPDKAID
Sbjct: 334 FQPIQVDEPTVEDTIAILKGLRDRYEAHHRINISDEALEAAAKLSDCYVSDRFLPDKAID 393
Query: 256 LIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQI 315
LIDEA S+VRL+ P +E+E+E+ ++ EK+ AV Q+FE A LRD++ L+ Q
Sbjct: 394 LIDEASSKVRLKSHTTPNNLKEIEQEIEKVKNEKDAAVHAQEFENAANLRDKQTKLEKQY 453
Query: 316 SALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLH 375
++ K T GD +++ DI +++ WTGIP+ K++ ESDRLL +E+TLH
Sbjct: 454 EDAKNEWK------TTQGDQSTSLSKEDIGEVIAGWTGIPLTKINETESDRLLNLEQTLH 507
Query: 376 KRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEE 435
RVIGQ++AV +IS+A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+ALA FG E+
Sbjct: 508 DRVIGQNDAVTSISKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGEED 567
Query: 436 AMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVF 495
AMIR+DMSEFME+H VS+L+G+PPGYVG+ EGGQLTE VRR+PY+V+LFDEIEKAHPDVF
Sbjct: 568 AMIRVDMSEFMEKHAVSRLVGAPPGYVGHDEGGQLTEKVRRKPYSVILFDEIEKAHPDVF 627
Query: 496 NMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNR 555
N++LQ+L+DG LTD+KGR VDF+NT++IMTSNVG+ ++ R GF + D Y
Sbjct: 628 NILLQVLDDGHLTDTKGRQVDFRNTVIIMTSNVGAQELQD-QRFAGFGGGSEGHD--YET 684
Query: 556 IKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVT 615
I+ + +ELK FRPEFLNR+D++IVF +L+K E+KEI +M+ ++ RL +DI + VT
Sbjct: 685 IRKTMMKELKNSFRPEFLNRVDDIIVFHKLSKDELKEIVTMMVNKLTQRLSEQDINIVVT 744
Query: 616 ERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSD 670
++ +E++ EEGY+P YGARPL RAI + +ED+++E +L EG V++D D D
Sbjct: 745 DKAKEKIAEEGYDPEYGARPLIRAIQKTVEDNLSELILDGNQIEGKEVVIDHDGD 799
>sp|Q49V34|CLPC_STAS1 ATP-dependent Clp protease ATP-binding subunit ClpC
OS=Staphylococcus saprophyticus subsp. saprophyticus
(strain ATCC 15305 / DSM 20229) GN=clpC PE=3 SV=1
Length = 820
Score = 807 bits (2085), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 388/653 (59%), Positives = 513/653 (78%), Gaps = 9/653 (1%)
Query: 16 GSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVG 75
+ N PTL+ +LT +A++G LDPV+GR +I RV+++L RRTKNNP LIGEPGVG
Sbjct: 154 ANKSNNTPTLDSLARDLTVIAKDGTLDPVIGRDKEITRVIEVLSRRTKNNPVLIGEPGVG 213
Query: 76 KTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDE 135
KTAIAEGLAQ I + +VP+T++GK+V++LDMG +VAGTKYRGEFEERLKK+MEEI Q+
Sbjct: 214 KTAIAEGLAQAIVNNEVPETLKGKRVMSLDMGTVVAGTKYRGEFEERLKKVMEEIHQAGN 273
Query: 136 IILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERR 195
+ILFIDE+HTL+GAG AEGAIDA+NILKP+LARGELQCIGATTLDEYRK+IEKD ALERR
Sbjct: 274 VILFIDELHTLVGAGGAEGAIDASNILKPALARGELQCIGATTLDEYRKNIEKDAALERR 333
Query: 196 FQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAID 255
FQPV+V EP+V++TI+ILKGLR+RYE HH++ +DEALVSAA+LS++Y+SDRFLPDKAID
Sbjct: 334 FQPVQVDEPTVEDTIEILKGLRDRYEAHHRINISDEALVSAAKLSHRYVSDRFLPDKAID 393
Query: 256 LIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQI 315
LIDEA S+VRL+ P +E+E+++ Q+ EK+ AV Q+FE A LRD++ L+ Q
Sbjct: 394 LIDEASSKVRLKSHTTPPNLKEIEQQIEQVKNEKDAAVHAQEFENAANLRDKQTKLEKQY 453
Query: 316 SALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLH 375
K T+ GD ++E DI +++ WTGIP+ K++ ESDRLL +E+TLH
Sbjct: 454 EEANTNWK-----NTQNGD-NTSLSEEDIGEVIAGWTGIPLTKINETESDRLLNLEDTLH 507
Query: 376 KRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEE 435
RVIGQ +AV +IS+A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+ALA FG ++
Sbjct: 508 NRVIGQKDAVTSISKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGEDD 567
Query: 436 AMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVF 495
AMIR+DMSEFME+H VS+L+G+PPGYVG+ +GGQLTE VRR+PY+V+LFDEIEKAHPDVF
Sbjct: 568 AMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKVRRKPYSVILFDEIEKAHPDVF 627
Query: 496 NMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNR 555
N++LQ+L+DG LTD+KGR VDF+NT++IMTSNVG+ ++ R GF + +D Y
Sbjct: 628 NILLQVLDDGHLTDTKGRRVDFRNTVIIMTSNVGAQELQD-QRFAGFGGATEGQD--YES 684
Query: 556 IKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVT 615
I+ + +ELK FRPEFLNR+D++IVF +L+K E+K+I +M+ ++ +RL +DI + VT
Sbjct: 685 IRKTMMKELKNAFRPEFLNRVDDIIVFHKLSKDELKQIVTMMVNKLTNRLSEQDINISVT 744
Query: 616 ERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVD 668
E +E++ EEGY+P YGARPL RAI + +ED+++E +L EG V +D D
Sbjct: 745 EAAKEKIAEEGYDPEYGARPLIRAIQKTVEDNLSELILDGNQIEGKEVKIDHD 797
>sp|Q8CQ88|CLPC_STAES ATP-dependent Clp protease ATP-binding subunit ClpC
OS=Staphylococcus epidermidis (strain ATCC 12228)
GN=clpC PE=3 SV=1
Length = 817
Score = 800 bits (2067), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/653 (58%), Positives = 512/653 (78%), Gaps = 9/653 (1%)
Query: 16 GSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVG 75
+ N PTL+ +LT +A++G LDPVVGR +I RV+++L RRTKNNP LIGEPGVG
Sbjct: 154 ANKSNNTPTLDGLARDLTVIAKDGTLDPVVGRDKEITRVIEVLSRRTKNNPVLIGEPGVG 213
Query: 76 KTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDE 135
KTAIAEGLAQ I +VP+T++ K+V++LDMG +VAGTKYRGEFEERLKK+MEEI Q+
Sbjct: 214 KTAIAEGLAQAIVKNEVPETLKDKRVMSLDMGTVVAGTKYRGEFEERLKKVMEEIHQAGN 273
Query: 136 IILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERR 195
+ILFIDE+HTL+GAG AEGAIDA+NILKP+LARGELQCIGATTLDEYRK+IEKD ALERR
Sbjct: 274 VILFIDELHTLVGAGGAEGAIDASNILKPALARGELQCIGATTLDEYRKNIEKDAALERR 333
Query: 196 FQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAID 255
FQP++V EP+V++TI+ILKGLR+RYE HH++ +DEAL +AA+LS +Y+SDRFLPDKAID
Sbjct: 334 FQPIQVDEPTVEDTIEILKGLRDRYEAHHRINISDEALEAAAKLSDRYVSDRFLPDKAID 393
Query: 256 LIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQI 315
LIDEA S+VRL+ P +E+E+E+ ++ EK+ AV Q+FE A LRD++ L+ Q
Sbjct: 394 LIDEASSKVRLKSHTTPSNLKEIEQEIDKVKNEKDAAVHAQEFENAANLRDKQSKLEKQY 453
Query: 316 SALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLH 375
D E A+ G + ++E +I +++ WTGIP+ K++ ESDRLL +E+TLH
Sbjct: 454 E---DAKNEWKNAQ---GGLDTALSEENIAEVIAGWTGIPLTKINETESDRLLNLEDTLH 507
Query: 376 KRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEE 435
KRVIGQ++AV +IS+A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+ALA FG ++
Sbjct: 508 KRVIGQNDAVNSISKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGEDD 567
Query: 436 AMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVF 495
AMIR+DMSEFME+H VS+L+G+PPGYVG+ +GGQLTE VRR+PY+V+LFDEIEKAHPDVF
Sbjct: 568 AMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKVRRKPYSVILFDEIEKAHPDVF 627
Query: 496 NMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNR 555
N++LQ+L+DG LTD+KGRTVDF+NT++IMTSNVG+ ++ R GF + S Y
Sbjct: 628 NILLQVLDDGHLTDTKGRTVDFRNTVIIMTSNVGAQELQD-QRFAGF--GGASEGSDYET 684
Query: 556 IKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVT 615
++ + +ELK FRPEFLNR+D++IVF +LTK E+KEI +M+ ++ RL ++I + VT
Sbjct: 685 VRKTMMKELKNSFRPEFLNRVDDIIVFHKLTKDELKEIVTMMVNKLTHRLSEQNINIVVT 744
Query: 616 ERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVD 668
++ +E++ EEGY+P YGARPL RAI + +ED+++E +L EG V +D D
Sbjct: 745 DKAKEKIAEEGYDPEYGARPLIRAIQKTVEDNLSELILDGNKIEGKEVTIDHD 797
>sp|Q5HRM8|CLPC_STAEQ ATP-dependent Clp protease ATP-binding subunit ClpC
OS=Staphylococcus epidermidis (strain ATCC 35984 /
RP62A) GN=clpC PE=3 SV=1
Length = 817
Score = 800 bits (2067), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/653 (58%), Positives = 512/653 (78%), Gaps = 9/653 (1%)
Query: 16 GSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVG 75
+ N PTL+ +LT +A++G LDPVVGR +I RV+++L RRTKNNP LIGEPGVG
Sbjct: 154 ANKSNNTPTLDGLARDLTVIAKDGTLDPVVGRDKEITRVIEVLSRRTKNNPVLIGEPGVG 213
Query: 76 KTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDE 135
KTAIAEGLAQ I +VP+T++ K+V++LDMG +VAGTKYRGEFEERLKK+MEEI Q+
Sbjct: 214 KTAIAEGLAQAIVKNEVPETLKDKRVMSLDMGTVVAGTKYRGEFEERLKKVMEEIHQAGN 273
Query: 136 IILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERR 195
+ILFIDE+HTL+GAG AEGAIDA+NILKP+LARGELQCIGATTLDEYRK+IEKD ALERR
Sbjct: 274 VILFIDELHTLVGAGGAEGAIDASNILKPALARGELQCIGATTLDEYRKNIEKDAALERR 333
Query: 196 FQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAID 255
FQP++V EP+V++TI+ILKGLR+RYE HH++ +DEAL +AA+LS +Y+SDRFLPDKAID
Sbjct: 334 FQPIQVDEPTVEDTIEILKGLRDRYEAHHRINISDEALEAAAKLSDRYVSDRFLPDKAID 393
Query: 256 LIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQI 315
LIDEA S+VRL+ P +E+E+E+ ++ EK+ AV Q+FE A LRD++ L+ Q
Sbjct: 394 LIDEASSKVRLKSHTTPSNLKEIEQEIDKVKNEKDAAVHAQEFENAANLRDKQSKLEKQY 453
Query: 316 SALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLH 375
D E A+ G + ++E +I +++ WTGIP+ K++ ESDRLL +E+TLH
Sbjct: 454 E---DAKNEWKNAQ---GGLDTALSEENIAEVIAGWTGIPLTKINETESDRLLNLEDTLH 507
Query: 376 KRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEE 435
KRVIGQ++AV +IS+A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+ALA FG ++
Sbjct: 508 KRVIGQNDAVNSISKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGEDD 567
Query: 436 AMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVF 495
AMIR+DMSEFME+H VS+L+G+PPGYVG+ +GGQLTE VRR+PY+V+LFDEIEKAHPDVF
Sbjct: 568 AMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKVRRKPYSVILFDEIEKAHPDVF 627
Query: 496 NMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNR 555
N++LQ+L+DG LTD+KGRTVDF+NT++IMTSNVG+ ++ R GF + S Y
Sbjct: 628 NILLQVLDDGHLTDTKGRTVDFRNTVIIMTSNVGAQELQD-QRFAGF--GGASEGSDYET 684
Query: 556 IKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVT 615
++ + +ELK FRPEFLNR+D++IVF +LTK E+KEI +M+ ++ RL ++I + VT
Sbjct: 685 VRKTMMKELKNSFRPEFLNRVDDIIVFHKLTKDELKEIVTMMVNKLTHRLSEQNINIVVT 744
Query: 616 ERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVD 668
++ +E++ EEGY+P YGARPL RAI + +ED+++E +L EG V +D D
Sbjct: 745 DKAKEKIAEEGYDPEYGARPLIRAIQKTVEDNLSELILDGNKIEGKEVTIDHD 797
>sp|Q2YSD6|CLPC_STAAB ATP-dependent Clp protease ATP-binding subunit ClpC
OS=Staphylococcus aureus (strain bovine RF122 / ET3-1)
GN=clpC PE=3 SV=1
Length = 818
Score = 799 bits (2064), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 383/653 (58%), Positives = 513/653 (78%), Gaps = 9/653 (1%)
Query: 16 GSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVG 75
S N PTL+ +LT +A++G LDPV+GR +I RV+++L RRTKNNP LIGEPGVG
Sbjct: 154 ASKSNNTPTLDSLARDLTVIAKDGTLDPVIGRDKEITRVIEVLSRRTKNNPVLIGEPGVG 213
Query: 76 KTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDE 135
KTAIAEGLAQ I + +VP+T++ K+V++LDMG +VAGTKYRGEFEERLKK+MEEI+Q+
Sbjct: 214 KTAIAEGLAQAIVNNEVPETLKDKRVMSLDMGTVVAGTKYRGEFEERLKKVMEEIQQAGN 273
Query: 136 IILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERR 195
+ILFIDE+HTL+GAG AEGAIDA+NILKP+LARGELQCIGATTLDEYRK+IEKD ALERR
Sbjct: 274 VILFIDELHTLVGAGGAEGAIDASNILKPALARGELQCIGATTLDEYRKNIEKDAALERR 333
Query: 196 FQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAID 255
FQPV+V EPSV +T+ ILKGLR+RYE HH++ +DEA+ +A +LS +Y+SDRFLPDKAID
Sbjct: 334 FQPVQVDEPSVVDTVAILKGLRDRYEAHHRINISDEAIEAAVKLSNRYVSDRFLPDKAID 393
Query: 256 LIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQI 315
LIDEA S+VRL+ P +E+E+E+ ++ EK+ AV Q+FE A LRD++ L+ Q
Sbjct: 394 LIDEASSKVRLKSHTTPNNLKEIEQEIEKVKNEKDAAVHAQEFENAANLRDKQTKLEKQY 453
Query: 316 SALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLH 375
++ K T+ G + ++E DI +++ WTGIP+ K++ ES++LL +E+TLH
Sbjct: 454 EEAKNEWK-----NTQNG-MSTSLSEEDIAEVIAGWTGIPLTKINETESEKLLSLEDTLH 507
Query: 376 KRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEE 435
+RVIGQ +AV +IS+A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+ALA FG ++
Sbjct: 508 ERVIGQKDAVNSISKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGDDD 567
Query: 436 AMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVF 495
AMIR+DMSEFME+H VS+L+G+PPGYVG+ +GGQLTE VRR+PY+V+LFDEIEKAHPDVF
Sbjct: 568 AMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKVRRKPYSVILFDEIEKAHPDVF 627
Query: 496 NMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNR 555
N++LQ+L+DG LTD+KGRTVDF+NT++IMTSNVG+ ++ R GF D +D Y
Sbjct: 628 NILLQVLDDGHLTDTKGRTVDFRNTIIIMTSNVGAQELQD-QRFAGFGGSSDGQD--YET 684
Query: 556 IKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVT 615
I+ + +ELK FRPEFLNR+D++IVF +LTK E+KEI +M+ ++ +RL ++I + VT
Sbjct: 685 IRKTMLKELKNSFRPEFLNRVDDIIVFHKLTKEELKEIVTMMVNKLTNRLSEQNINIIVT 744
Query: 616 ERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVD 668
++ ++++ EEGY+P YGARPL RAI + +ED+++E +L EG V VD D
Sbjct: 745 DKAKDKIAEEGYDPEYGARPLIRAIQKTIEDNLSELILDGNQIEGKKVTVDHD 797
>sp|Q6GBW3|CLPC_STAAS ATP-dependent Clp protease ATP-binding subunit ClpC
OS=Staphylococcus aureus (strain MSSA476) GN=clpC PE=3
SV=1
Length = 818
Score = 799 bits (2063), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/653 (58%), Positives = 511/653 (78%), Gaps = 9/653 (1%)
Query: 16 GSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVG 75
S N PTL+ +LT +A++G LDPV+GR +I RV+++L RRTKNNP LIGEPGVG
Sbjct: 154 ASKSNNTPTLDSLARDLTVIAKDGTLDPVIGRDKEITRVIEVLSRRTKNNPVLIGEPGVG 213
Query: 76 KTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDE 135
KTAIAEGLAQ I + +VP+T++ K+V++LDMG +VAGTKYRGEFEERLKK+MEEI+Q+
Sbjct: 214 KTAIAEGLAQAIVNNEVPETLKDKRVMSLDMGTVVAGTKYRGEFEERLKKVMEEIQQAGN 273
Query: 136 IILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERR 195
+ILFIDE+HTL+GAG AEGAIDA+NILKP+LARGELQCIGATTLDEYRK+IEKD ALERR
Sbjct: 274 VILFIDELHTLVGAGGAEGAIDASNILKPALARGELQCIGATTLDEYRKNIEKDAALERR 333
Query: 196 FQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAID 255
FQPV+V EPSV +T+ ILKGLR+RYE HH++ +DEA+ +A +LS +Y+SDRFLPDKAID
Sbjct: 334 FQPVQVDEPSVVDTVAILKGLRDRYEAHHRINISDEAIEAAVKLSNRYVSDRFLPDKAID 393
Query: 256 LIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQI 315
LIDEA S+VRL+ P +E+E+E+ ++ EK+ AV Q+FE A LRD++ L+ Q
Sbjct: 394 LIDEASSKVRLKSHTTPNNLKEIEQEIEKVKNEKDAAVHAQEFENAANLRDKQTKLEKQY 453
Query: 316 SALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLH 375
++ K + + ++E DI +++ WTGIP+ K++ ES++LL +E+TLH
Sbjct: 454 EEAKNEWKNAQNGMSTS------LSEEDIAEVIAGWTGIPLTKINETESEKLLSLEDTLH 507
Query: 376 KRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEE 435
+RVIGQ +AV +IS+A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+ALA FG ++
Sbjct: 508 ERVIGQKDAVNSISKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGDDD 567
Query: 436 AMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVF 495
AMIR+DMSEFME+H VS+L+G+PPGYVG+ +GGQLTE VRR+PY+V+LFDEIEKAHPDVF
Sbjct: 568 AMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKVRRKPYSVILFDEIEKAHPDVF 627
Query: 496 NMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNR 555
N++LQ+L+DG LTD+KGRTVDF+NT++IMTSNVG+ ++ R GF D +D Y
Sbjct: 628 NILLQVLDDGHLTDTKGRTVDFRNTIIIMTSNVGAQELQD-QRFAGFGGSSDGQD--YET 684
Query: 556 IKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVT 615
I+ + +ELK FRPEFLNR+D++IVF +LTK E+KEI +M+ ++ +RL ++I + VT
Sbjct: 685 IRKTMLKELKNSFRPEFLNRVDDIIVFHKLTKEELKEIVTMMVNKLTNRLSEQNINIIVT 744
Query: 616 ERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVD 668
++ ++++ EEGY+P YGARPL RAI + +ED+++E +L EG V VD D
Sbjct: 745 DKAKDKIAEEGYDPEYGARPLIRAIQKTIEDNLSELILDGNQIEGKKVTVDHD 797
>sp|Q6GJE4|CLPC_STAAR ATP-dependent Clp protease ATP-binding subunit ClpC
OS=Staphylococcus aureus (strain MRSA252) GN=clpC PE=3
SV=1
Length = 818
Score = 799 bits (2063), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/653 (58%), Positives = 511/653 (78%), Gaps = 9/653 (1%)
Query: 16 GSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVG 75
S N PTL+ +LT +A++G LDPV+GR +I RV+++L RRTKNNP LIGEPGVG
Sbjct: 154 ASKSNNTPTLDSLARDLTVIAKDGTLDPVIGRDKEITRVIEVLSRRTKNNPVLIGEPGVG 213
Query: 76 KTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDE 135
KTAIAEGLAQ I + +VP+T++ K+V++LDMG +VAGTKYRGEFEERLKK+MEEI+Q+
Sbjct: 214 KTAIAEGLAQAIVNNEVPETLKDKRVMSLDMGTVVAGTKYRGEFEERLKKVMEEIQQAGN 273
Query: 136 IILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERR 195
+ILFIDE+HTL+GAG AEGAIDA+NILKP+LARGELQCIGATTLDEYRK+IEKD ALERR
Sbjct: 274 VILFIDELHTLVGAGGAEGAIDASNILKPALARGELQCIGATTLDEYRKNIEKDAALERR 333
Query: 196 FQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAID 255
FQPV+V EPSV +T+ ILKGLR+RYE HH++ +DEA+ +A +LS +Y+SDRFLPDKAID
Sbjct: 334 FQPVQVDEPSVVDTVAILKGLRDRYEAHHRINISDEAIEAAVKLSNRYVSDRFLPDKAID 393
Query: 256 LIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQI 315
LIDEA S+VRL+ P +E+E+E+ ++ EK+ AV Q+FE A LRD++ L+ Q
Sbjct: 394 LIDEASSKVRLKSHTTPNNLKEIEQEIEKVKNEKDAAVHAQEFENAANLRDKQTKLEKQY 453
Query: 316 SALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLH 375
++ K + + ++E DI +++ WTGIP+ K++ ES++LL +E+TLH
Sbjct: 454 EEAKNEWKNAQNGMSTS------LSEEDIAEVIAGWTGIPLTKINETESEKLLSLEDTLH 507
Query: 376 KRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEE 435
+RVIGQ +AV +IS+A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+ALA FG ++
Sbjct: 508 ERVIGQKDAVNSISKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGDDD 567
Query: 436 AMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVF 495
AMIR+DMSEFME+H VS+L+G+PPGYVG+ +GGQLTE VRR+PY+V+LFDEIEKAHPDVF
Sbjct: 568 AMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKVRRKPYSVILFDEIEKAHPDVF 627
Query: 496 NMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNR 555
N++LQ+L+DG LTD+KGRTVDF+NT++IMTSNVG+ ++ R GF D +D Y
Sbjct: 628 NILLQVLDDGHLTDTKGRTVDFRNTIIIMTSNVGAQELQD-QRFAGFGGSSDGQD--YET 684
Query: 556 IKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVT 615
I+ + +ELK FRPEFLNR+D++IVF +LTK E+KEI +M+ ++ +RL ++I + VT
Sbjct: 685 IRKTMLKELKNSFRPEFLNRVDDIIVFHKLTKEELKEIVTMMVNKLTNRLSEQNINIIVT 744
Query: 616 ERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVD 668
++ ++++ EEGY+P YGARPL RAI + +ED+++E +L EG V VD D
Sbjct: 745 DKAKDKIAEEGYDPEYGARPLIRAIQKTIEDNLSELILDGNQIEGKKVTVDHD 797
>sp|Q7A797|CLPC_STAAN ATP-dependent Clp protease ATP-binding subunit ClpC
OS=Staphylococcus aureus (strain N315) GN=clpC PE=1 SV=1
Length = 818
Score = 799 bits (2063), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/653 (58%), Positives = 511/653 (78%), Gaps = 9/653 (1%)
Query: 16 GSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVG 75
S N PTL+ +LT +A++G LDPV+GR +I RV+++L RRTKNNP LIGEPGVG
Sbjct: 154 ASKSNNTPTLDSLARDLTVIAKDGTLDPVIGRDKEITRVIEVLSRRTKNNPVLIGEPGVG 213
Query: 76 KTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDE 135
KTAIAEGLAQ I + +VP+T++ K+V++LDMG +VAGTKYRGEFEERLKK+MEEI+Q+
Sbjct: 214 KTAIAEGLAQAIVNNEVPETLKDKRVMSLDMGTVVAGTKYRGEFEERLKKVMEEIQQAGN 273
Query: 136 IILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERR 195
+ILFIDE+HTL+GAG AEGAIDA+NILKP+LARGELQCIGATTLDEYRK+IEKD ALERR
Sbjct: 274 VILFIDELHTLVGAGGAEGAIDASNILKPALARGELQCIGATTLDEYRKNIEKDAALERR 333
Query: 196 FQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAID 255
FQPV+V EPSV +T+ ILKGLR+RYE HH++ +DEA+ +A +LS +Y+SDRFLPDKAID
Sbjct: 334 FQPVQVDEPSVVDTVAILKGLRDRYEAHHRINISDEAIEAAVKLSNRYVSDRFLPDKAID 393
Query: 256 LIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQI 315
LIDEA S+VRL+ P +E+E+E+ ++ EK+ AV Q+FE A LRD++ L+ Q
Sbjct: 394 LIDEASSKVRLKSHTTPNNLKEIEQEIEKVKNEKDAAVHAQEFENAANLRDKQTKLEKQY 453
Query: 316 SALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLH 375
++ K + + ++E DI +++ WTGIP+ K++ ES++LL +E+TLH
Sbjct: 454 EEAKNEWKNAQNGMSTS------LSEEDIAEVIAGWTGIPLTKINETESEKLLSLEDTLH 507
Query: 376 KRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEE 435
+RVIGQ +AV +IS+A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+ALA FG ++
Sbjct: 508 ERVIGQKDAVNSISKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGDDD 567
Query: 436 AMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVF 495
AMIR+DMSEFME+H VS+L+G+PPGYVG+ +GGQLTE VRR+PY+V+LFDEIEKAHPDVF
Sbjct: 568 AMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKVRRKPYSVILFDEIEKAHPDVF 627
Query: 496 NMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNR 555
N++LQ+L+DG LTD+KGRTVDF+NT++IMTSNVG+ ++ R GF D +D Y
Sbjct: 628 NILLQVLDDGHLTDTKGRTVDFRNTIIIMTSNVGAQELQD-QRFAGFGGSSDGQD--YET 684
Query: 556 IKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVT 615
I+ + +ELK FRPEFLNR+D++IVF +LTK E+KEI +M+ ++ +RL ++I + VT
Sbjct: 685 IRKTMLKELKNSFRPEFLNRVDDIIVFHKLTKEELKEIVTMMVNKLTNRLSEQNINIIVT 744
Query: 616 ERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVD 668
++ ++++ EEGY+P YGARPL RAI + +ED+++E +L EG V VD D
Sbjct: 745 DKAKDKIAEEGYDPEYGARPLIRAIQKTIEDNLSELILDGNQIEGKKVTVDHD 797
>sp|Q99W78|CLPC_STAAM ATP-dependent Clp protease ATP-binding subunit ClpC
OS=Staphylococcus aureus (strain Mu50 / ATCC 700699)
GN=clpC PE=1 SV=1
Length = 818
Score = 799 bits (2063), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/653 (58%), Positives = 511/653 (78%), Gaps = 9/653 (1%)
Query: 16 GSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVG 75
S N PTL+ +LT +A++G LDPV+GR +I RV+++L RRTKNNP LIGEPGVG
Sbjct: 154 ASKSNNTPTLDSLARDLTVIAKDGTLDPVIGRDKEITRVIEVLSRRTKNNPVLIGEPGVG 213
Query: 76 KTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDE 135
KTAIAEGLAQ I + +VP+T++ K+V++LDMG +VAGTKYRGEFEERLKK+MEEI+Q+
Sbjct: 214 KTAIAEGLAQAIVNNEVPETLKDKRVMSLDMGTVVAGTKYRGEFEERLKKVMEEIQQAGN 273
Query: 136 IILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERR 195
+ILFIDE+HTL+GAG AEGAIDA+NILKP+LARGELQCIGATTLDEYRK+IEKD ALERR
Sbjct: 274 VILFIDELHTLVGAGGAEGAIDASNILKPALARGELQCIGATTLDEYRKNIEKDAALERR 333
Query: 196 FQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAID 255
FQPV+V EPSV +T+ ILKGLR+RYE HH++ +DEA+ +A +LS +Y+SDRFLPDKAID
Sbjct: 334 FQPVQVDEPSVVDTVAILKGLRDRYEAHHRINISDEAIEAAVKLSNRYVSDRFLPDKAID 393
Query: 256 LIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQI 315
LIDEA S+VRL+ P +E+E+E+ ++ EK+ AV Q+FE A LRD++ L+ Q
Sbjct: 394 LIDEASSKVRLKSHTTPNNLKEIEQEIEKVKNEKDAAVHAQEFENAANLRDKQTKLEKQY 453
Query: 316 SALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLH 375
++ K + + ++E DI +++ WTGIP+ K++ ES++LL +E+TLH
Sbjct: 454 EEAKNEWKNAQNGMSTS------LSEEDIAEVIAGWTGIPLTKINETESEKLLSLEDTLH 507
Query: 376 KRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEE 435
+RVIGQ +AV +IS+A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+ALA FG ++
Sbjct: 508 ERVIGQKDAVNSISKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGDDD 567
Query: 436 AMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVF 495
AMIR+DMSEFME+H VS+L+G+PPGYVG+ +GGQLTE VRR+PY+V+LFDEIEKAHPDVF
Sbjct: 568 AMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKVRRKPYSVILFDEIEKAHPDVF 627
Query: 496 NMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNR 555
N++LQ+L+DG LTD+KGRTVDF+NT++IMTSNVG+ ++ R GF D +D Y
Sbjct: 628 NILLQVLDDGHLTDTKGRTVDFRNTIIIMTSNVGAQELQD-QRFAGFGGSSDGQD--YET 684
Query: 556 IKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVT 615
I+ + +ELK FRPEFLNR+D++IVF +LTK E+KEI +M+ ++ +RL ++I + VT
Sbjct: 685 IRKTMLKELKNSFRPEFLNRVDDIIVFHKLTKEELKEIVTMMVNKLTNRLSEQNINIIVT 744
Query: 616 ERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVD 668
++ ++++ EEGY+P YGARPL RAI + +ED+++E +L EG V VD D
Sbjct: 745 DKAKDKIAEEGYDPEYGARPLIRAIQKTIEDNLSELILDGNQIEGKKVTVDHD 797
>sp|P0C281|CLPC_STAAC ATP-dependent Clp protease ATP-binding subunit ClpC
OS=Staphylococcus aureus (strain COL) GN=clpC PE=3 SV=1
Length = 818
Score = 799 bits (2063), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/653 (58%), Positives = 511/653 (78%), Gaps = 9/653 (1%)
Query: 16 GSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVG 75
S N PTL+ +LT +A++G LDPV+GR +I RV+++L RRTKNNP LIGEPGVG
Sbjct: 154 ASKSNNTPTLDSLARDLTVIAKDGTLDPVIGRDKEITRVIEVLSRRTKNNPVLIGEPGVG 213
Query: 76 KTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDE 135
KTAIAEGLAQ I + +VP+T++ K+V++LDMG +VAGTKYRGEFEERLKK+MEEI+Q+
Sbjct: 214 KTAIAEGLAQAIVNNEVPETLKDKRVMSLDMGTVVAGTKYRGEFEERLKKVMEEIQQAGN 273
Query: 136 IILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERR 195
+ILFIDE+HTL+GAG AEGAIDA+NILKP+LARGELQCIGATTLDEYRK+IEKD ALERR
Sbjct: 274 VILFIDELHTLVGAGGAEGAIDASNILKPALARGELQCIGATTLDEYRKNIEKDAALERR 333
Query: 196 FQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAID 255
FQPV+V EPSV +T+ ILKGLR+RYE HH++ +DEA+ +A +LS +Y+SDRFLPDKAID
Sbjct: 334 FQPVQVDEPSVVDTVAILKGLRDRYEAHHRINISDEAIEAAVKLSNRYVSDRFLPDKAID 393
Query: 256 LIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQI 315
LIDEA S+VRL+ P +E+E+E+ ++ EK+ AV Q+FE A LRD++ L+ Q
Sbjct: 394 LIDEASSKVRLKSHTTPNNLKEIEQEIEKVKNEKDAAVHAQEFENAANLRDKQTKLEKQY 453
Query: 316 SALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLH 375
++ K + + ++E DI +++ WTGIP+ K++ ES++LL +E+TLH
Sbjct: 454 EEAKNEWKNAQNGMSTS------LSEEDIAEVIAGWTGIPLTKINETESEKLLSLEDTLH 507
Query: 376 KRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEE 435
+RVIGQ +AV +IS+A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+ALA FG ++
Sbjct: 508 ERVIGQKDAVNSISKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGDDD 567
Query: 436 AMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVF 495
AMIR+DMSEFME+H VS+L+G+PPGYVG+ +GGQLTE VRR+PY+V+LFDEIEKAHPDVF
Sbjct: 568 AMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKVRRKPYSVILFDEIEKAHPDVF 627
Query: 496 NMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNR 555
N++LQ+L+DG LTD+KGRTVDF+NT++IMTSNVG+ ++ R GF D +D Y
Sbjct: 628 NILLQVLDDGHLTDTKGRTVDFRNTIIIMTSNVGAQELQD-QRFAGFGGSSDGQD--YET 684
Query: 556 IKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVT 615
I+ + +ELK FRPEFLNR+D++IVF +LTK E+KEI +M+ ++ +RL ++I + VT
Sbjct: 685 IRKTMLKELKNSFRPEFLNRVDDIIVFHKLTKEELKEIVTMMVNKLTNRLSEQNINIIVT 744
Query: 616 ERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVD 668
++ ++++ EEGY+P YGARPL RAI + +ED+++E +L EG V VD D
Sbjct: 745 DKAKDKIAEEGYDPEYGARPLIRAIQKTIEDNLSELILDGNQIEGKKVTVDHD 797
>sp|Q2G0P5|CLPC_STAA8 ATP-dependent Clp protease ATP-binding subunit ClpC
OS=Staphylococcus aureus (strain NCTC 8325) GN=clpC PE=1
SV=1
Length = 818
Score = 799 bits (2063), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/653 (58%), Positives = 511/653 (78%), Gaps = 9/653 (1%)
Query: 16 GSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVG 75
S N PTL+ +LT +A++G LDPV+GR +I RV+++L RRTKNNP LIGEPGVG
Sbjct: 154 ASKSNNTPTLDSLARDLTVIAKDGTLDPVIGRDKEITRVIEVLSRRTKNNPVLIGEPGVG 213
Query: 76 KTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDE 135
KTAIAEGLAQ I + +VP+T++ K+V++LDMG +VAGTKYRGEFEERLKK+MEEI+Q+
Sbjct: 214 KTAIAEGLAQAIVNNEVPETLKDKRVMSLDMGTVVAGTKYRGEFEERLKKVMEEIQQAGN 273
Query: 136 IILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERR 195
+ILFIDE+HTL+GAG AEGAIDA+NILKP+LARGELQCIGATTLDEYRK+IEKD ALERR
Sbjct: 274 VILFIDELHTLVGAGGAEGAIDASNILKPALARGELQCIGATTLDEYRKNIEKDAALERR 333
Query: 196 FQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAID 255
FQPV+V EPSV +T+ ILKGLR+RYE HH++ +DEA+ +A +LS +Y+SDRFLPDKAID
Sbjct: 334 FQPVQVDEPSVVDTVAILKGLRDRYEAHHRINISDEAIEAAVKLSNRYVSDRFLPDKAID 393
Query: 256 LIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQI 315
LIDEA S+VRL+ P +E+E+E+ ++ EK+ AV Q+FE A LRD++ L+ Q
Sbjct: 394 LIDEASSKVRLKSHTTPNNLKEIEQEIEKVKNEKDAAVHAQEFENAANLRDKQTKLEKQY 453
Query: 316 SALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLH 375
++ K + + ++E DI +++ WTGIP+ K++ ES++LL +E+TLH
Sbjct: 454 EEAKNEWKNAQNGMSTS------LSEEDIAEVIAGWTGIPLTKINETESEKLLSLEDTLH 507
Query: 376 KRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEE 435
+RVIGQ +AV +IS+A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+ALA FG ++
Sbjct: 508 ERVIGQKDAVNSISKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGDDD 567
Query: 436 AMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVF 495
AMIR+DMSEFME+H VS+L+G+PPGYVG+ +GGQLTE VRR+PY+V+LFDEIEKAHPDVF
Sbjct: 568 AMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKVRRKPYSVILFDEIEKAHPDVF 627
Query: 496 NMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNR 555
N++LQ+L+DG LTD+KGRTVDF+NT++IMTSNVG+ ++ R GF D +D Y
Sbjct: 628 NILLQVLDDGHLTDTKGRTVDFRNTIIIMTSNVGAQELQD-QRFAGFGGSSDGQD--YET 684
Query: 556 IKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVT 615
I+ + +ELK FRPEFLNR+D++IVF +LTK E+KEI +M+ ++ +RL ++I + VT
Sbjct: 685 IRKTMLKELKNSFRPEFLNRVDDIIVFHKLTKEELKEIVTMMVNKLTNRLSEQNINIIVT 744
Query: 616 ERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVD 668
++ ++++ EEGY+P YGARPL RAI + +ED+++E +L EG V VD D
Sbjct: 745 DKAKDKIAEEGYDPEYGARPLIRAIQKTIEDNLSELILDGNQIEGKKVTVDHD 797
>sp|Q2FJB5|CLPC_STAA3 ATP-dependent Clp protease ATP-binding subunit ClpC
OS=Staphylococcus aureus (strain USA300) GN=clpC PE=3
SV=1
Length = 818
Score = 799 bits (2063), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/653 (58%), Positives = 511/653 (78%), Gaps = 9/653 (1%)
Query: 16 GSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVG 75
S N PTL+ +LT +A++G LDPV+GR +I RV+++L RRTKNNP LIGEPGVG
Sbjct: 154 ASKSNNTPTLDSLARDLTVIAKDGTLDPVIGRDKEITRVIEVLSRRTKNNPVLIGEPGVG 213
Query: 76 KTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDE 135
KTAIAEGLAQ I + +VP+T++ K+V++LDMG +VAGTKYRGEFEERLKK+MEEI+Q+
Sbjct: 214 KTAIAEGLAQAIVNNEVPETLKDKRVMSLDMGTVVAGTKYRGEFEERLKKVMEEIQQAGN 273
Query: 136 IILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERR 195
+ILFIDE+HTL+GAG AEGAIDA+NILKP+LARGELQCIGATTLDEYRK+IEKD ALERR
Sbjct: 274 VILFIDELHTLVGAGGAEGAIDASNILKPALARGELQCIGATTLDEYRKNIEKDAALERR 333
Query: 196 FQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAID 255
FQPV+V EPSV +T+ ILKGLR+RYE HH++ +DEA+ +A +LS +Y+SDRFLPDKAID
Sbjct: 334 FQPVQVDEPSVVDTVAILKGLRDRYEAHHRINISDEAIEAAVKLSNRYVSDRFLPDKAID 393
Query: 256 LIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQI 315
LIDEA S+VRL+ P +E+E+E+ ++ EK+ AV Q+FE A LRD++ L+ Q
Sbjct: 394 LIDEASSKVRLKSHTTPNNLKEIEQEIEKVKNEKDAAVHAQEFENAANLRDKQTKLEKQY 453
Query: 316 SALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLH 375
++ K + + ++E DI +++ WTGIP+ K++ ES++LL +E+TLH
Sbjct: 454 EEAKNEWKNAQNGMSTS------LSEEDIAEVIAGWTGIPLTKINETESEKLLSLEDTLH 507
Query: 376 KRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEE 435
+RVIGQ +AV +IS+A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+ALA FG ++
Sbjct: 508 ERVIGQKDAVNSISKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGDDD 567
Query: 436 AMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVF 495
AMIR+DMSEFME+H VS+L+G+PPGYVG+ +GGQLTE VRR+PY+V+LFDEIEKAHPDVF
Sbjct: 568 AMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKVRRKPYSVILFDEIEKAHPDVF 627
Query: 496 NMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNR 555
N++LQ+L+DG LTD+KGRTVDF+NT++IMTSNVG+ ++ R GF D +D Y
Sbjct: 628 NILLQVLDDGHLTDTKGRTVDFRNTIIIMTSNVGAQELQD-QRFAGFGGSSDGQD--YET 684
Query: 556 IKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVT 615
I+ + +ELK FRPEFLNR+D++IVF +LTK E+KEI +M+ ++ +RL ++I + VT
Sbjct: 685 IRKTMLKELKNSFRPEFLNRVDDIIVFHKLTKEELKEIVTMMVNKLTNRLSEQNINIIVT 744
Query: 616 ERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVD 668
++ ++++ EEGY+P YGARPL RAI + +ED+++E +L EG V VD D
Sbjct: 745 DKAKDKIAEEGYDPEYGARPLIRAIQKTIEDNLSELILDGNQIEGKKVTVDHD 797
>sp|Q8NXY8|CLPC_STAAW ATP-dependent Clp protease ATP-binding subunit ClpC
OS=Staphylococcus aureus (strain MW2) GN=clpC PE=3 SV=1
Length = 818
Score = 794 bits (2051), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/653 (58%), Positives = 510/653 (78%), Gaps = 9/653 (1%)
Query: 16 GSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVG 75
S N PTL+ +LT +A++G LDPV+GR +I RV+++L RRTKNNP LIGEPGVG
Sbjct: 154 ASKSNNTPTLDSLARDLTVIAKDGTLDPVIGRDKEITRVIEVLSRRTKNNPVLIGEPGVG 213
Query: 76 KTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDE 135
KTAIAEGLAQ I + +VP+T++ K+V++LDMG +VAGTKYRGEFEERLKK+MEEI+Q+
Sbjct: 214 KTAIAEGLAQAIVNNEVPETLKDKRVMSLDMGTVVAGTKYRGEFEERLKKVMEEIQQAGN 273
Query: 136 IILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERR 195
+ILFIDE+HTL+GAG AEGAIDA+NILKP+LARGELQCIGATTLDEYRK+IEKD ALERR
Sbjct: 274 VILFIDELHTLVGAGGAEGAIDASNILKPALARGELQCIGATTLDEYRKNIEKDAALERR 333
Query: 196 FQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAID 255
FQPV+V EPSV +T+ ILKGLR+RYE HH++ +DEA+ +A +LS +Y+SDRFLPDKAID
Sbjct: 334 FQPVQVDEPSVVDTVAILKGLRDRYEAHHRINISDEAIEAAVKLSNRYVSDRFLPDKAID 393
Query: 256 LIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQI 315
LIDEA S+VRL+ P +E+E+E+ ++ EK+ AV Q+FE A LRD++ L+ Q
Sbjct: 394 LIDEASSKVRLKSHTTPNNLKEIEQEIEKVKNEKDAAVHAQEFENAANLRDKQTKLEKQY 453
Query: 316 SALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLH 375
++ K + + ++E DI +++ WTGIP+ K++ ES++LL +E+TLH
Sbjct: 454 EEAKNEWKNAQNGMSTS------LSEEDIAEVIAGWTGIPLTKINETESEKLLSLEDTLH 507
Query: 376 KRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEE 435
+RVIGQ +AV +IS+A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+ALA FG ++
Sbjct: 508 ERVIGQKDAVNSISKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGDDD 567
Query: 436 AMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVF 495
AMIR+DMSEFME+H VS+L+G+P GYVG+ +GGQLTE VRR+PY+V+LFDEIEKAHPDVF
Sbjct: 568 AMIRVDMSEFMEKHAVSRLVGAPLGYVGHDDGGQLTEKVRRKPYSVILFDEIEKAHPDVF 627
Query: 496 NMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNR 555
N++LQ+L+DG LTD+KGRTVDF+NT++IMTSNVG+ ++ R GF D +D Y
Sbjct: 628 NILLQVLDDGHLTDTKGRTVDFRNTIIIMTSNVGAQELQD-QRFAGFGGSSDGQD--YET 684
Query: 556 IKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVT 615
I+ + +ELK FRPEFLNR+D++IVF +LTK E+KEI +M+ ++ +RL ++I + VT
Sbjct: 685 IRKTMLKELKNSFRPEFLNRVDDIIVFHKLTKEELKEIVTMMVNKLTNRLSEQNINIIVT 744
Query: 616 ERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVD 668
++ ++++ EEGY+P YGARPL RAI + +ED+++E +L EG V VD D
Sbjct: 745 DKAKDKIAEEGYDPEYGARPLIRAIQKTIEDNLSELILDGNQIEGKKVTVDHD 797
>sp|P37571|CLPC_BACSU Negative regulator of genetic competence ClpC/MecB OS=Bacillus
subtilis (strain 168) GN=clpC PE=1 SV=1
Length = 810
Score = 794 bits (2051), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 398/667 (59%), Positives = 520/667 (77%), Gaps = 10/667 (1%)
Query: 9 VGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCL 68
G+ G +S PTL+ +LT +A+E LDPV+GR +I+RV+++L RRTKNNP L
Sbjct: 147 TGSSAAGTNSNANTPTLDSLARDLTAIAKEDSLDPVIGRSKEIQRVIEVLSRRTKNNPVL 206
Query: 69 IGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLME 128
IGEPGVGKTAIAEGLAQ+I + +VP+ + K+V+TLDMG +VAGTKYRGEFE+RLKK+M+
Sbjct: 207 IGEPGVGKTAIAEGLAQQIINNEVPEILRDKRVMTLDMGTVVAGTKYRGEFEDRLKKVMD 266
Query: 129 EIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEK 188
EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTLDEYRK+IEK
Sbjct: 267 EIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEYRKYIEK 326
Query: 189 DPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRF 248
D ALERRFQP++V +PSVDE+IQIL+GLR+RYE HH++ TD+A+ +A +LS +YISDRF
Sbjct: 327 DAALERRFQPIQVDQPSVDESIQILQGLRDRYEAHHRVSITDDAIEAAVKLSDRYISDRF 386
Query: 249 LPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDRE 308
LPDKAIDLIDEAGS+VRLR P +ELE++L ++ KEK+ AV+ Q+FEKA LRD E
Sbjct: 387 LPDKAIDLIDEAGSKVRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFEKAASLRDTE 446
Query: 309 MDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLL 368
L+ Q+ KE + G VT DI +VS+WTG+PV K++ E+D+LL
Sbjct: 447 QRLREQVEDTKKSWKE------KQGQENSEVTVDDIAMVVSSWTGVPVSKIAQTETDKLL 500
Query: 369 KMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAA 428
ME LH RVIGQDEAV A+++A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+ALA
Sbjct: 501 NMENILHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAE 560
Query: 429 YYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIE 488
FG EE+MIR+DMSE+ME+H+ S+L+GSPPGYVGY EGGQLTE VRR+PY+VVL DEIE
Sbjct: 561 SIFGDEESMIRIDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPYSVVLLDEIE 620
Query: 489 KAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDE 548
KAHPDVFN++LQ+LEDGRLTDSKGRTVDF+NT+LIMTSNVG+S +++ + +GF++ +
Sbjct: 621 KAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTILIMTSNVGASELKR-NKYVGFNV--QD 677
Query: 549 KDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTK 608
+ ++ +K V ELK+ FRPEF+NR+DE+IVF L K + EI +M ++ RLK +
Sbjct: 678 ETQNHKDMKDKVMGELKRAFRPEFINRIDEIIVFHSLEKKHLTEIVSLMSDQLTKRLKEQ 737
Query: 609 DIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVD 668
D+ +++T+ + +V EEG + YGARPLRRAI + +ED ++E++L I +G +++DV+
Sbjct: 738 DLSIELTDAAKAKVAEEGVDLEYGARPLRRAIQKHVEDRLSEELLRGNIHKGQHIVLDVE 797
Query: 669 SDGNVTV 675
DG V
Sbjct: 798 -DGEFVV 803
>sp|P49574|CLPC_ODOSI ATP-dependent Clp protease ATP-binding subunit clpA homolog
OS=Odontella sinensis GN=clpC PE=3 SV=1
Length = 885
Score = 777 bits (2007), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/667 (56%), Positives = 511/667 (76%), Gaps = 31/667 (4%)
Query: 19 GNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTA 78
G+ PTL+EY N++K A +GKLDPV+GR +I V+++L RR KNNP LIGEPGVGKTA
Sbjct: 167 GSSTPTLDEYSENISKEAVDGKLDPVIGRDKEIHEVIKVLARRRKNNPVLIGEPGVGKTA 226
Query: 79 IAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIIL 138
+AEGLAQ I + PD ++G ++ LD+G ++AGTKYRGEFEER+K+++EE++ IIL
Sbjct: 227 VAEGLAQLIIAEKAPDFLDGNLLMALDLGSILAGTKYRGEFEERIKRIVEEVQNDSAIIL 286
Query: 139 FIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQP 198
IDE+HTL+GAGAAEGA+DAANILKP+LARG+ +CIGATT+DEYRK+IE+DPALERRFQP
Sbjct: 287 VIDEIHTLVGAGAAEGAVDAANILKPALARGKFRCIGATTIDEYRKYIERDPALERRFQP 346
Query: 199 VKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLID 258
V V EP+V TI+IL GLR ++E HH L Y D+A+ AA L+ ++I+DRFLPDKAID++D
Sbjct: 347 VHVKEPTVGVTIEILLGLRSKFEEHHTLSYHDKAVEQAAILADKFIADRFLPDKAIDVLD 406
Query: 259 EAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQI--- 315
EAGSRVRL + +LP + L KEL+ ++K E+++ DF+ A +L D EM+++ I
Sbjct: 407 EAGSRVRLENRRLPRGMKRLLKELQDTLRDKEESIKEHDFDIAKQLVDHEMEVRTHIRIM 466
Query: 316 --SALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEET 373
S L ++ +++ E + V E D+ +++ WTGIPV K+S ES RLL MEET
Sbjct: 467 KQSILTNETLGLARKEIDT------VLEGDVAEVIAGWTGIPVNKISDSESKRLLTMEET 520
Query: 374 LHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGS 433
LH+R+IGQ A+ ++S+AIRRARVGL+NP+RPIASFIF+GPTGVGK+EL KAL+ Y FG+
Sbjct: 521 LHERLIGQHHAIVSVSKAIRRARVGLRNPDRPIASFIFAGPTGVGKTELTKALSEYMFGN 580
Query: 434 EEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPD 493
E++MIRLDMSE+ME+HTV+KLIGSPPGYVGY EGGQLTEAV+ +PY+VVL DE+EKAHPD
Sbjct: 581 EDSMIRLDMSEYMEKHTVAKLIGSPPGYVGYNEGGQLTEAVQTKPYSVVLLDEVEKAHPD 640
Query: 494 VFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGG--------RRIGFDLD 545
VFN++LQIL+DGRLTDSKGRT+DF+NT++IMT+N+G+ +IEK + F +D
Sbjct: 641 VFNLLLQILDDGRLTDSKGRTIDFRNTMIIMTTNLGAKIIEKESGIKPKTKQDKPAFRID 700
Query: 546 YDE-----------KDSS-YNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEI 593
KDS+ + ++ LV EELK++FRPEFLNR+DE+IVF LTK ++ EI
Sbjct: 701 ESGCLGWEPTPEPIKDSALFEKVTELVNEELKEFFRPEFLNRIDEIIVFNHLTKYDIWEI 760
Query: 594 ADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKML 653
+M+K++ RL+ K++ L+V R + EEGY+P YGARPLRRA+MRLLED++A++ L
Sbjct: 761 CGLMVKQLQKRLEEKELTLEVDVSVRNLLTEEGYDPVYGARPLRRAVMRLLEDTLAQQCL 820
Query: 654 AREIKEG 660
++ + G
Sbjct: 821 SKPLYPG 827
>sp|P24428|CLPC_MYCLE Probable ATP-dependent Clp protease ATP-binding subunit
OS=Mycobacterium leprae (strain TN) GN=clpC PE=3 SV=2
Length = 848
Score = 771 bits (1992), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/648 (58%), Positives = 503/648 (77%), Gaps = 15/648 (2%)
Query: 25 LEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLA 84
L+++G NLT A E KLDPV+GR+ +IERV+Q+L RRTKNNP LIGEPGVGKTA+ EGLA
Sbjct: 171 LDQFGRNLTAAAMESKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLA 230
Query: 85 QRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVH 144
Q I G+VP+T++ K++ TLD+G LVAG++YRG+FEERLKK+++EI +IILFIDE+H
Sbjct: 231 QAIVHGEVPETLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDELH 290
Query: 145 TLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEP 204
TL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEYRK+IEKD ALERRFQPV+V EP
Sbjct: 291 TLVGAGAAEGAIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEP 350
Query: 205 SVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRV 264
+V+ TI+ILKGLR+RYE HH++ TD A+V+AA L+ +YI+DRFLPDKAIDLIDEAG+R+
Sbjct: 351 TVEHTIEILKGLRDRYEAHHRVSITDSAMVAAATLADRYINDRFLPDKAIDLIDEAGARM 410
Query: 265 RLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKE 324
R+R P + RE ++++ + +EK A+ QDFEKA LRDRE L AQ +
Sbjct: 411 RIRRMTAPPDLREFDEKIAEARREKESAIDAQDFEKAASLRDREKQLVAQ--------RA 462
Query: 325 MSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQ 381
+ + +GD+ V+ EVD I ++ WTGIPV K++ E+ RLL+MEE LHKR+IGQ
Sbjct: 463 EREKQWRSGDL-DVIAEVDDEQIAEVLGNWTGIPVFKLTEAETTRLLRMEEELHKRIIGQ 521
Query: 382 DEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLD 441
++AVKA+S+AIRR R GLK+P RP SFIF+GP+GVGK+EL+KALA + FG ++A+I++D
Sbjct: 522 EDAVKAVSKAIRRTRAGLKDPKRPSGSFIFAGPSGVGKTELSKALANFLFGDDDALIQID 581
Query: 442 MSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQI 501
M EF +R T S+L G+PPGYVGY EGGQLTE VRR+P++VVLFDEIEKAH +++N +LQ+
Sbjct: 582 MGEFHDRFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNSLLQV 641
Query: 502 LEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVT 561
LEDGRLTD +GRTVDFKNT+LI TSN+G+S I K +G ++ Y R+K V
Sbjct: 642 LEDGRLTDGQGRTVDFKNTVLIFTSNLGTSDISKP---VGLGFTQGSGENDYERMKQKVN 698
Query: 562 EELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRER 621
+ELK++FRPEFLNR+D++IVF QL++ E+ + D+M+ V ++LK KD+ L++T + +
Sbjct: 699 DELKKHFRPEFLNRIDDIIVFHQLSRDEIIRMVDLMISRVANQLKVKDMTLELTNKAKAL 758
Query: 622 VVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDS 669
+ + G++P GARPLRR I R +ED ++EK+L E+ G V VDVD+
Sbjct: 759 LAKRGFDPVLGARPLRRTIQREIEDQLSEKILFEEVGPGQVVTVDVDN 806
>sp|P0A522|CLPC_MYCTU Probable ATP-dependent Clp protease ATP-binding subunit
OS=Mycobacterium tuberculosis GN=clpC PE=1 SV=1
Length = 848
Score = 758 bits (1958), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/649 (58%), Positives = 503/649 (77%), Gaps = 15/649 (2%)
Query: 24 TLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGL 83
L+++G NLT A EGKLDPV+GR+ +IERV+Q+L RRTKNNP LIGEPGVGKTA+ EGL
Sbjct: 170 VLDQFGRNLTAAAMEGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGL 229
Query: 84 AQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEV 143
AQ I G+VP+T++ K++ TLD+G LVAG++YRG+FEERLKK+++EI +IILFIDE+
Sbjct: 230 AQAIVHGEVPETLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDEL 289
Query: 144 HTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPE 203
HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEYRK+IEKD ALERRFQPV+V E
Sbjct: 290 HTLVGAGAAEGAIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGE 349
Query: 204 PSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSR 263
P+V+ TI+ILKGLR+RYE HH++ TD A+V+AA L+ +YI+DRFLPDKAIDLIDEAG+R
Sbjct: 350 PTVEHTIEILKGLRDRYEAHHRVSITDAAMVAAATLADRYINDRFLPDKAIDLIDEAGAR 409
Query: 264 VRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGK 323
+R+R P + RE ++++ + +EK A+ QDFEKA LRDRE L AQ +
Sbjct: 410 MRIRRMTAPPDLREFDEKIAEARREKESAIDAQDFEKAASLRDREKTLVAQ--------R 461
Query: 324 EMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIG 380
+ + +GD+ VV EVD I ++ WTGIPV K++ E+ RLL+MEE LHKR+IG
Sbjct: 462 AEREKQWRSGDL-DVVAEVDDEQIAEVLGNWTGIPVFKLTEAETTRLLRMEEELHKRIIG 520
Query: 381 QDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRL 440
Q++AVKA+S+AIRR R GLK+P RP SFIF+GP+GVGK+EL+KALA + FG ++A+I++
Sbjct: 521 QEDAVKAVSKAIRRTRAGLKDPKRPSGSFIFAGPSGVGKTELSKALANFLFGDDDALIQI 580
Query: 441 DMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQ 500
DM EF +R T S+L G+PPGYVGY EGGQLTE VRR+P++VVLFDEIEKAH +++N +LQ
Sbjct: 581 DMGEFHDRFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNSLLQ 640
Query: 501 ILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLV 560
+LEDGRLTD +GRTVDFKNT+LI TSN+G+S I K +G ++ Y R+K V
Sbjct: 641 VLEDGRLTDGQGRTVDFKNTVLIFTSNLGTSDISKP---VGLGFSKGGGENDYERMKQKV 697
Query: 561 TEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRE 620
+ELK++FRPEFLNR+D++IVF QLT+ E+ + D+M+ V +LK+KD+ L +T+ +
Sbjct: 698 NDELKKHFRPEFLNRIDDIIVFHQLTREEIIRMVDLMISRVAGQLKSKDMALVLTDAAKA 757
Query: 621 RVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDS 669
+ + G++P GARPLRR I R +ED ++EK+L E+ G V VDVD+
Sbjct: 758 LLAKRGFDPVLGARPLRRTIQREIEDQLSEKILFEEVGPGQVVTVDVDN 806
>sp|P0A523|CLPC_MYCBO Probable ATP-dependent Clp protease ATP-binding subunit
OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97)
GN=clpC PE=3 SV=1
Length = 848
Score = 758 bits (1958), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/649 (58%), Positives = 503/649 (77%), Gaps = 15/649 (2%)
Query: 24 TLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGL 83
L+++G NLT A EGKLDPV+GR+ +IERV+Q+L RRTKNNP LIGEPGVGKTA+ EGL
Sbjct: 170 VLDQFGRNLTAAAMEGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGL 229
Query: 84 AQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEV 143
AQ I G+VP+T++ K++ TLD+G LVAG++YRG+FEERLKK+++EI +IILFIDE+
Sbjct: 230 AQAIVHGEVPETLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDEL 289
Query: 144 HTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPE 203
HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEYRK+IEKD ALERRFQPV+V E
Sbjct: 290 HTLVGAGAAEGAIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGE 349
Query: 204 PSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSR 263
P+V+ TI+ILKGLR+RYE HH++ TD A+V+AA L+ +YI+DRFLPDKAIDLIDEAG+R
Sbjct: 350 PTVEHTIEILKGLRDRYEAHHRVSITDAAMVAAATLADRYINDRFLPDKAIDLIDEAGAR 409
Query: 264 VRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGK 323
+R+R P + RE ++++ + +EK A+ QDFEKA LRDRE L AQ +
Sbjct: 410 MRIRRMTAPPDLREFDEKIAEARREKESAIDAQDFEKAASLRDREKTLVAQ--------R 461
Query: 324 EMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIG 380
+ + +GD+ VV EVD I ++ WTGIPV K++ E+ RLL+MEE LHKR+IG
Sbjct: 462 AEREKQWRSGDL-DVVAEVDDEQIAEVLGNWTGIPVFKLTEAETTRLLRMEEELHKRIIG 520
Query: 381 QDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRL 440
Q++AVKA+S+AIRR R GLK+P RP SFIF+GP+GVGK+EL+KALA + FG ++A+I++
Sbjct: 521 QEDAVKAVSKAIRRTRAGLKDPKRPSGSFIFAGPSGVGKTELSKALANFLFGDDDALIQI 580
Query: 441 DMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQ 500
DM EF +R T S+L G+PPGYVGY EGGQLTE VRR+P++VVLFDEIEKAH +++N +LQ
Sbjct: 581 DMGEFHDRFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNSLLQ 640
Query: 501 ILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLV 560
+LEDGRLTD +GRTVDFKNT+LI TSN+G+S I K +G ++ Y R+K V
Sbjct: 641 VLEDGRLTDGQGRTVDFKNTVLIFTSNLGTSDISKP---VGLGFSKGGGENDYERMKQKV 697
Query: 561 TEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRE 620
+ELK++FRPEFLNR+D++IVF QLT+ E+ + D+M+ V +LK+KD+ L +T+ +
Sbjct: 698 NDELKKHFRPEFLNRIDDIIVFHQLTREEIIRMVDLMISRVAGQLKSKDMALVLTDAAKA 757
Query: 621 RVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDS 669
+ + G++P GARPLRR I R +ED ++EK+L E+ G V VDVD+
Sbjct: 758 LLAKRGFDPVLGARPLRRTIQREIEDQLSEKILFEEVGPGQVVTVDVDN 806
>sp|Q8DJ40|CLPB1_THEEB Chaperone protein ClpB 1 OS=Thermosynechococcus elongatus (strain
BP-1) GN=clpB1 PE=3 SV=1
Length = 871
Score = 734 bits (1896), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/711 (53%), Positives = 505/711 (71%), Gaps = 72/711 (10%)
Query: 21 KMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIA 80
K LE+YG +LT LA +GKLDPV+GR +I RV+QIL RRTKNNP LIGEPGVGKTAIA
Sbjct: 158 KYAALEKYGRDLTLLARQGKLDPVIGRDDEIRRVIQILSRRTKNNPVLIGEPGVGKTAIA 217
Query: 81 EGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSD-EIILF 139
EGLAQRI + DVPD++ +++I LDMG L+AG KYRGEFEERLK +++E+ S+ +IILF
Sbjct: 218 EGLAQRIVARDVPDSLRDRQLIALDMGALIAGAKYRGEFEERLKAVLKEVTDSNGQIILF 277
Query: 140 IDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPV 199
IDE+HT++GAGA +GA+DA N+LKP LARGEL+CIGATTLDEYRK+IEKD ALERRFQ V
Sbjct: 278 IDEIHTVVGAGATQGAMDAGNLLKPMLARGELRCIGATTLDEYRKYIEKDAALERRFQQV 337
Query: 200 KVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDE 259
V +PSV++TI IL+GL+ERYEIHH ++ +D ALV+AA LS +YISDRFLPDKAIDL+DE
Sbjct: 338 YVDQPSVEDTISILRGLKERYEIHHGVKISDTALVAAATLSARYISDRFLPDKAIDLVDE 397
Query: 260 AGSRVRLRHAQLPEEARELEKELRQI-------TKEKNEAVRGQDFEKA----GELRDRE 308
A +++++ PEE E+++++ Q+ KE + A R + EK +L++ +
Sbjct: 398 AAAKLKMEITSKPEELDEIDRKILQLEMERLSLQKETSAASRDR-LEKLERELADLKEEQ 456
Query: 309 MDLKAQISA-----------------------------------------LVDKGKEMSK 327
L AQ A L + K++++
Sbjct: 457 SRLNAQWQAEKEVIDRLQSIKEEIEKVNIEIQQAERNYDLNRAAELKYGKLTELHKKLAE 516
Query: 328 AETEAGDVG--------PVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVI 379
AE + ++ VTE DI I+S WTGIPV K+ E+ +LL +EE LHKRV+
Sbjct: 517 AEAKLREIQVGGRSLLRDEVTEADIAEIISKWTGIPVSKLVESEAQKLLHLEEELHKRVV 576
Query: 380 GQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIR 439
GQDEAV A++ AI+R+R GL +PNRPIASFIF GPTGVGK+ELAKALAA+ F +EEA++R
Sbjct: 577 GQDEAVSAVAEAIQRSRAGLADPNRPIASFIFLGPTGVGKTELAKALAAFMFDTEEALVR 636
Query: 440 LDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMML 499
+DMSE+ME+H VS+LIG+PPGYVGY EGGQLTEA+RRRPY VVLFDEIEKAHPDVFN+ L
Sbjct: 637 IDMSEYMEKHAVSRLIGAPPGYVGYDEGGQLTEAIRRRPYAVVLFDEIEKAHPDVFNVFL 696
Query: 500 QILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSL 559
QIL+DGR+TDS+GRTVDFKNT++IMTSN+GS I LD DS Y+ + +
Sbjct: 697 QILDDGRVTDSQGRTVDFKNTIIIMTSNIGSQYI----------LDVAGDDSRYSEMYNR 746
Query: 560 VTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFR 619
V E ++ +FRPEFLNR+DE I+F L K ++++I + ++ + RL + I L +TE+
Sbjct: 747 VMEAMRAHFRPEFLNRVDEFIIFHSLRKDQLRQIVQLQVQRLQQRLSDRHITLSLTEKAI 806
Query: 620 ERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSD 670
+ + E GY+P YGARPL+RAI + LE +A+ +L + +GD+++VDV D
Sbjct: 807 DFLAEVGYDPVYGARPLKRAIQKQLETPIAKAILRGDFFDGDTILVDVGED 857
>sp|Q72IK9|CLPB_THET2 Chaperone protein ClpB OS=Thermus thermophilus (strain HB27 / ATCC
BAA-163 / DSM 7039) GN=clpB PE=3 SV=1
Length = 854
Score = 731 bits (1888), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/705 (55%), Positives = 510/705 (72%), Gaps = 66/705 (9%)
Query: 24 TLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGL 83
LE+YG +LT+LA EGKLDPV+GR +I RV+QIL RRTKNNP LIGEPGVGKTAI EGL
Sbjct: 152 ALEQYGIDLTRLAAEGKLDPVIGRDEEIRRVIQILLRRTKNNPVLIGEPGVGKTAIVEGL 211
Query: 84 AQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSD-EIILFIDE 142
AQRI GDVP+ ++GK++++L MG L+AG KYRGEFEERLK +++E+ QS E+ILFIDE
Sbjct: 212 AQRIVKGDVPEGLKGKRIVSLQMGSLLAGAKYRGEFEERLKAVIQEVVQSQGEVILFIDE 271
Query: 143 VHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVP 202
+HT++GAG AEGA+DA N+LKP+LARGEL+ IGATTLDEYR+ IEKDPALERRFQPV V
Sbjct: 272 LHTVVGAGKAEGAVDAGNMLKPALARGELRLIGATTLDEYRE-IEKDPALERRFQPVYVD 330
Query: 203 EPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGS 262
EP+V+ETI IL+GL+E+YE+HH +R +D A+++AA LS++YI++R LPDKAIDLIDEA +
Sbjct: 331 EPTVEETISILRGLKEKYEVHHGVRISDSAIIAAATLSHRYITERRLPDKAIDLIDEAAA 390
Query: 263 RVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLK------AQIS 316
R+R+ PEE LE++ Q+ E+ + +D + L+ E ++ A++
Sbjct: 391 RLRMALESAPEEIDALERKKLQLEIEREALKKEKDPDSQERLKAIEAEIAKLTEEIAKLR 450
Query: 317 ALVDKGKEMSK----------------------------AETEAGDVGPVVTEV------ 342
A ++ +E+ + AE G++ + EV
Sbjct: 451 AEWEREREILRKLREAQHRLDEVRREIELAERQYDLNRAAELRYGELPKLEAEVEALSEK 510
Query: 343 --------------DIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAI 388
DI IVS WTGIPV K+ E ++LL++EE LHKRV+GQDEA++A+
Sbjct: 511 LRGARFVRLEVTEEDIAEIVSRWTGIPVSKLLEGEREKLLRLEEELHKRVVGQDEAIRAV 570
Query: 389 SRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMER 448
+ AIRRAR GLK+PNRPI SF+F GPTGVGK+ELAK LAA F +EEAMIR+DM+E+ME+
Sbjct: 571 ADAIRRARAGLKDPNRPIGSFLFLGPTGVGKTELAKTLAATLFDTEEAMIRIDMTEYMEK 630
Query: 449 HTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLT 508
H VS+LIG+PPGYVGY EGGQLTEAVRRRPY+V+LFDEIEKAHPDVFN++LQIL+DGRLT
Sbjct: 631 HAVSRLIGAPPGYVGYEEGGQLTEAVRRRPYSVILFDEIEKAHPDVFNILLQILDDGRLT 690
Query: 509 DSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYF 568
DS GRTVDF+NT++I+TSN+GS +I +G +K Y RI+ V + L+Q+F
Sbjct: 691 DSHGRTVDFRNTVIILTSNLGSPLILEGL----------QKGWPYERIRDEVFKVLQQHF 740
Query: 569 RPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYN 628
RPEFLNRLDE++VFR LTK ++++I +I L + RL K I L++TE ++ + E GY+
Sbjct: 741 RPEFLNRLDEIVVFRPLTKEQIRQIVEIQLSYLRARLAEKRISLELTEAAKDFLAERGYD 800
Query: 629 PSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNV 673
P +GARPLRR I R LE +A+K+LA E+KEGD V VDV G V
Sbjct: 801 PVFGARPLRRVIQRELETPLAQKILAGEVKEGDRVQVDVGPAGLV 845
>sp|Q9RA63|CLPB_THET8 Chaperone protein ClpB OS=Thermus thermophilus (strain HB8 / ATCC
27634 / DSM 579) GN=clpB PE=1 SV=2
Length = 854
Score = 731 bits (1887), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/705 (55%), Positives = 510/705 (72%), Gaps = 66/705 (9%)
Query: 24 TLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGL 83
LE+YG +LT+LA EGKLDPV+GR +I RV+QIL RRTKNNP LIGEPGVGKTAI EGL
Sbjct: 152 ALEQYGIDLTRLAAEGKLDPVIGRDEEIRRVIQILLRRTKNNPVLIGEPGVGKTAIVEGL 211
Query: 84 AQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSD-EIILFIDE 142
AQRI GDVP+ ++GK++++L MG L+AG KYRGEFEERLK +++E+ QS E+ILFIDE
Sbjct: 212 AQRIVKGDVPEGLKGKRIVSLQMGSLLAGAKYRGEFEERLKAVIQEVVQSQGEVILFIDE 271
Query: 143 VHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVP 202
+HT++GAG AEGA+DA N+LKP+LARGEL+ IGATTLDEYR+ IEKDPALERRFQPV V
Sbjct: 272 LHTVVGAGKAEGAVDAGNMLKPALARGELRLIGATTLDEYRE-IEKDPALERRFQPVYVD 330
Query: 203 EPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGS 262
EP+V+ETI IL+GL+E+YE+HH +R +D A+++AA LS++YI++R LPDKAIDLIDEA +
Sbjct: 331 EPTVEETISILRGLKEKYEVHHGVRISDSAIIAAATLSHRYITERRLPDKAIDLIDEAAA 390
Query: 263 RVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLK------AQIS 316
R+R+ PEE LE++ Q+ E+ + +D + L+ E ++ A++
Sbjct: 391 RLRMALESAPEEIDALERKKLQLEIEREALKKEKDPDSQERLKAIEAEIAKLTEEIAKLR 450
Query: 317 ALVDKGKEMSK----------------------------AETEAGDVGPVVTEV------ 342
A ++ +E+ + AE G++ + EV
Sbjct: 451 AEWEREREILRKLREAQHRLDEVRREIELAERQYDLNRAAELRYGELPKLEAEVEALSEK 510
Query: 343 --------------DIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAI 388
DI IVS WTGIPV K+ E ++LL++EE LHKRV+GQDEA++A+
Sbjct: 511 LRGARFVRLEVTEEDIAEIVSRWTGIPVSKLLEGEREKLLRLEEELHKRVVGQDEAIRAV 570
Query: 389 SRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMER 448
+ AIRRAR GLK+PNRPI SF+F GPTGVGK+ELAK LAA F +EEAMIR+DM+E+ME+
Sbjct: 571 ADAIRRARAGLKDPNRPIGSFLFLGPTGVGKTELAKTLAATLFDTEEAMIRIDMTEYMEK 630
Query: 449 HTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLT 508
H VS+LIG+PPGYVGY EGGQLTEAVRRRPY+V+LFDEIEKAHPDVFN++LQIL+DGRLT
Sbjct: 631 HAVSRLIGAPPGYVGYEEGGQLTEAVRRRPYSVILFDEIEKAHPDVFNILLQILDDGRLT 690
Query: 509 DSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYF 568
DS GRTVDF+NT++I+TSN+GS +I +G +K Y RI+ V + L+Q+F
Sbjct: 691 DSHGRTVDFRNTVIILTSNLGSPLILEGL----------QKGWPYERIRDEVFKVLQQHF 740
Query: 569 RPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYN 628
RPEFLNRLDE++VFR LTK ++++I +I L + RL K I L++TE ++ + E GY+
Sbjct: 741 RPEFLNRLDEIVVFRPLTKEQIRQIVEIQLSYLRARLAEKRISLELTEAAKDFLAERGYD 800
Query: 629 PSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNV 673
P +GARPLRR I R LE +A+K+LA E+KEGD V VDV G V
Sbjct: 801 PVFGARPLRRVIQRELETPLAQKILAGEVKEGDRVQVDVGPAGLV 845
>sp|P53533|CLPB1_SYNE7 Chaperone protein ClpB 1 OS=Synechococcus elongatus (strain PCC
7942) GN=clpB1 PE=2 SV=3
Length = 874
Score = 725 bits (1872), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/710 (52%), Positives = 499/710 (70%), Gaps = 70/710 (9%)
Query: 21 KMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIA 80
K LE+YG +LT++A GKLDPV+GR +I R +QIL RRTKNNP LIGEPGVGKTAIA
Sbjct: 159 KYEALEKYGRDLTEMARRGKLDPVIGRDDEIRRTIQILSRRTKNNPVLIGEPGVGKTAIA 218
Query: 81 EGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEII-LF 139
EGLAQRI +GDVP +++ +++I LDMG L+AG K+RGEFEERLK +++E+ S+ II LF
Sbjct: 219 EGLAQRIINGDVPQSLKDRRLIALDMGALIAGAKFRGEFEERLKAVLKEVTDSEGIIILF 278
Query: 140 IDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPV 199
IDE+HT++GAGA +G++DA N+LKP LARGEL+CIGATTLDEYR++IEKD ALERRFQ V
Sbjct: 279 IDEIHTVVGAGAVQGSMDAGNLLKPMLARGELRCIGATTLDEYRQYIEKDAALERRFQQV 338
Query: 200 KVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDE 259
V +P+V++TI IL+GL+ERYE+HH +R +D ALV+AA LS +YISDRFLPDKAIDL+DE
Sbjct: 339 FVDQPTVEDTISILRGLKERYEVHHGVRISDNALVAAAVLSTRYISDRFLPDKAIDLVDE 398
Query: 260 AGSRVRLRHAQLPEEARELEKELRQ-------ITKEKNEAV--RGQDFEK-AGELRDREM 309
+ +R+++ PEE E+++++ Q + KE + A R Q EK +L++ +
Sbjct: 399 SAARLKMEITSKPEELDEIDRKILQLEMERLSLQKESDLASQERLQRLEKELADLKEEQR 458
Query: 310 DLKAQISALVDKGKEMSKAETEAGDVGPV------------------------------- 338
L +Q A D ++ + E V +
Sbjct: 459 SLSSQWQAEKDVITDIQSVKEEIDQVNLLIQQAERDYDLNKAAELKYGKLTELQRKLNEM 518
Query: 339 ------------------VTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIG 380
VTEVDI I+S WTGIPV K+ E +LL ++E LH+RVIG
Sbjct: 519 EGGLATTHTSGKSLLREEVTEVDIAEIISKWTGIPVSKLVESEMQKLLNLDEELHQRVIG 578
Query: 381 QDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRL 440
Q+EAV A++ AI+R+R GL +P RPIASFIF GPTGVGK+ELAKALAAY F +E+AMIR+
Sbjct: 579 QEEAVSAVADAIQRSRAGLSDPKRPIASFIFLGPTGVGKTELAKALAAYLFDTEDAMIRI 638
Query: 441 DMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQ 500
DMSE+ME+H VS+LIG+PPGYVGY EGGQLTEAVRRRPY+V+LFDEIEKAHPDVFN+MLQ
Sbjct: 639 DMSEYMEKHAVSRLIGAPPGYVGYDEGGQLTEAVRRRPYSVILFDEIEKAHPDVFNVMLQ 698
Query: 501 ILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLV 560
IL+DGR+TDS+GRTVDFKNT+LI+TSN+GS I LD DS Y ++S V
Sbjct: 699 ILDDGRVTDSRGRTVDFKNTILILTSNIGSQYI----------LDVAGDDSRYEEMRSRV 748
Query: 561 TEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRE 620
TE L+ FRPEFLNR+DE I+F L K ++++I I L + +RL + + L ++ +
Sbjct: 749 TEALRANFRPEFLNRVDETIIFHSLRKDQLQQIVRIQLHRLEERLSDRKLSLSMSPEAID 808
Query: 621 RVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSD 670
+VE G++P YGARPL+R I R LE ++A+ +L + +GD++ V V+++
Sbjct: 809 FLVEIGFDPVYGARPLKRVIQRELETAIAKAILRGQFSDGDTIQVAVENE 858
>sp|O87444|CLPB_PLEBO Chaperone protein ClpB OS=Plectonema boryanum GN=clpB PE=2 SV=2
Length = 873
Score = 725 bits (1871), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/717 (53%), Positives = 497/717 (69%), Gaps = 90/717 (12%)
Query: 20 NKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAI 79
NK +LE+YG +LT+ A EGKLDPV+GR +I R +QIL RRTKNNP LIGEPGVGKTAI
Sbjct: 159 NKYESLEKYGRDLTQYAREGKLDPVIGRDDEIRRTIQILSRRTKNNPVLIGEPGVGKTAI 218
Query: 80 AEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQS-DEIIL 138
AEGLAQRI SGDVP +++ +K+I LDMG L+AG KYRGEFEERLK +++E+ S IIL
Sbjct: 219 AEGLAQRILSGDVPQSLKDRKLIALDMGALIAGAKYRGEFEERLKAVLKEVTDSRGNIIL 278
Query: 139 FIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQP 198
FIDE+HT++GAGA +GA+DA N+LKP LARGEL+CIGATTLDEYRK+IEKD ALERRFQ
Sbjct: 279 FIDEIHTVVGAGATQGAMDAGNLLKPMLARGELRCIGATTLDEYRKYIEKDAALERRFQQ 338
Query: 199 VKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLID 258
V V +PSV++TI IL+GL+ERYE+HH ++ +D ALV+AA LS +YISDRFLP KAIDL+D
Sbjct: 339 VFVDQPSVEDTISILRGLKERYEVHHGVKISDSALVAAATLSTRYISDRFLPSKAIDLVD 398
Query: 259 EA--------------------------------------GSRVRLR------------- 267
EA GSR RL
Sbjct: 399 EAAAKLKMEITSKPEELDEVDRKVLQLEMERLSLQKENDAGSRDRLERLERELADFKEDQ 458
Query: 268 ---HAQLPEEA------RELEKELRQITKEKNEAVRGQDFEKAGELR-------DREMD- 310
+AQ E ++L++E+ ++ E +A R D +A EL+ +R+++
Sbjct: 459 SKLNAQWQAEKSVITDLQKLKEEIDRVNLEIQQAERDYDLNRAAELKYGKLNELNRKVEE 518
Query: 311 LKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKM 370
++Q+S + G + + E V E DI I+S WTGIPV K+ E +LL++
Sbjct: 519 TESQLSQIQKSGATLLREE---------VLESDIAEIISKWTGIPVSKLVESEMQKLLQL 569
Query: 371 EETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYY 430
++ LH+RVIGQDEAV A+S AI+R+R GL +PNRP ASFIF GPTGVGK+ELAKALAA+
Sbjct: 570 DDVLHQRVIGQDEAVTAVSDAIQRSRAGLSDPNRPTASFIFLGPTGVGKTELAKALAAFL 629
Query: 431 FGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKA 490
F +EEAM+R+DMSE+ME+H+VS+LIG+PPGYVGY EGGQLTEAVRRRPY+V+LFDEIEKA
Sbjct: 630 FDTEEAMVRIDMSEYMEKHSVSRLIGAPPGYVGYEEGGQLTEAVRRRPYSVILFDEIEKA 689
Query: 491 HPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKD 550
HPDVFN+MLQIL+DGR+TDS+GRTVDFKNT++IMTSN+GS I +Y D
Sbjct: 690 HPDVFNVMLQILDDGRVTDSQGRTVDFKNTIIIMTSNIGSQYI----------FEYGGDD 739
Query: 551 SSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDI 610
Y I S V E + FRPEFLNR+DE+I+F L K +++EI I + RL K +
Sbjct: 740 DRYEEILSRVMEAMLSNFRPEFLNRIDEIIIFHSLQKAQLREIVKIQTHRLESRLARK-M 798
Query: 611 ELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDV 667
L++++ + + EG++P YGARPL+RAI R LE ++A+++L EGD++ VDV
Sbjct: 799 SLKLSDAALD-FLAEGFDPVYGARPLKRAIQRELETTIAKEILRSNFTEGDTIFVDV 854
>sp|Q7NFE9|CLPB_GLOVI Chaperone protein ClpB OS=Gloeobacter violaceus (strain PCC 7421)
GN=clpB PE=3 SV=1
Length = 872
Score = 724 bits (1870), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/710 (51%), Positives = 504/710 (70%), Gaps = 76/710 (10%)
Query: 24 TLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGL 83
+L++YG +LT+LA EGKLDPV+GR +I R +QIL RRTKNNP LIGEPGVGKTAIAEGL
Sbjct: 163 SLDKYGRDLTQLAREGKLDPVIGRDEEIRRTIQILSRRTKNNPVLIGEPGVGKTAIAEGL 222
Query: 84 AQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSD-EIILFIDE 142
AQRI SGDVP++++G+K+I LDMG L+AG+KYRGEFEERLK ++ E+ +S+ +I+LFIDE
Sbjct: 223 AQRIVSGDVPESLQGRKLIALDMGALIAGSKYRGEFEERLKAVLNEVTKSEGQIVLFIDE 282
Query: 143 VHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVP 202
+HT++GAGA +GA+DA N+LKP LARGEL+CIGATTLDEYRK+IEKD ALERRFQ V V
Sbjct: 283 IHTVVGAGATQGAMDAGNLLKPMLARGELRCIGATTLDEYRKYIEKDAALERRFQQVYVD 342
Query: 203 EPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGS 262
+P+V++TI IL+GL+ERYE+HH +R +D ALV+AA LS++YISDRFLPDKAIDL+DEA +
Sbjct: 343 QPTVEDTISILRGLKERYEVHHGVRISDSALVAAAVLSHRYISDRFLPDKAIDLMDEAAA 402
Query: 263 RVRLR-------------------------------------------HAQLPEEAREL- 278
++++ A L EE R L
Sbjct: 403 KLKMEITSKPEALDEVDRKILQLEMERLSLAKESDAASRDRLERLEKELADLKEEQRSLN 462
Query: 279 ----------------EKELRQITKEKNEAVRGQDFEKAGELRDREM-DLKAQISALVDK 321
++E+ Q+ + +A R D +A EL+ ++ +L+ ++ A
Sbjct: 463 AQWQAEKDIIDQVQAVKEEIDQVNVQIQQAERDYDLNRAAELKYGKLSELQKRLDA---A 519
Query: 322 GKEMSKAETEAGDV-GPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIG 380
K++S+ +T + VTE DI I+S WTGIPV K+ E ++LL +E+ LHKRV+G
Sbjct: 520 DKQLSETQTSGRSLLREEVTEEDIAEIISKWTGIPVSKLVASEREKLLHLEDELHKRVVG 579
Query: 381 QDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRL 440
Q+EAV+ +S AI+R+R GL +PNRPIASFIF GPTGVGK+ELAKALA++ F E AM+R+
Sbjct: 580 QEEAVRIVSEAIQRSRAGLADPNRPIASFIFLGPTGVGKTELAKALASFLFDDENAMVRI 639
Query: 441 DMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQ 500
DMSE+ME+H+VS+LIG+PPGYVGY EGGQLTEAVRRRPY VVLFDEIEKAH DVFN++LQ
Sbjct: 640 DMSEYMEKHSVSRLIGAPPGYVGYDEGGQLTEAVRRRPYAVVLFDEIEKAHNDVFNVLLQ 699
Query: 501 ILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLV 560
+L+DGR+TDS+GRT+DFKN ++IMTSN+GS I + G D+ Y +++ V
Sbjct: 700 VLDDGRITDSQGRTIDFKNAVIIMTSNIGSDAILRLG----------GNDAYYEQMREEV 749
Query: 561 TEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRE 620
++ +FRPEFLNR+D++I+FR L + ++ I + + + RL + I L+++E +
Sbjct: 750 MRAMQVHFRPEFLNRVDDIIIFRNLRRDQLAAIVKLQIARLEKRLADRKITLKLSEAAID 809
Query: 621 RVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSD 670
+VE GY+P YGARPL+RAI L + +A +L + +GD++ VD++++
Sbjct: 810 YIVEAGYDPVYGARPLKRAIQNELVNPLARGLLKGDFNDGDTIFVDIENE 859
>sp|Q7X2S8|CLPB_MEIRU Chaperone protein ClpB OS=Meiothermus ruber GN=clpB PE=3 SV=1
Length = 854
Score = 722 bits (1864), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/704 (53%), Positives = 499/704 (70%), Gaps = 80/704 (11%)
Query: 24 TLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGL 83
LE+YG +LT+ AEEGKLDPV+GR +I RV+QIL RRTKNNP LIGEPGVGKTA+ EGL
Sbjct: 152 ALEQYGLDLTRQAEEGKLDPVIGRDEEIRRVIQILLRRTKNNPVLIGEPGVGKTAVVEGL 211
Query: 84 AQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQS-DEIILFIDE 142
AQRI GDVP+ ++GK++++L MG L+AG KYRGEFEERLK +++E QS +IILFIDE
Sbjct: 212 AQRIVKGDVPEGLKGKRIVSLQMGSLLAGAKYRGEFEERLKAVIQETVQSAGQIILFIDE 271
Query: 143 VHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVP 202
+HT++GAG AEGA+DA N+LKP+LARGEL IGATTLDEYR+ IEKDPALERRFQPV V
Sbjct: 272 IHTVVGAGKAEGAVDAGNMLKPALARGELHLIGATTLDEYRE-IEKDPALERRFQPVFVD 330
Query: 203 EPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGS 262
EPS++ET+ IL+G++E+YE+HH +R +D AL++AAQLS++YI+DR LPDKAIDL+DEA +
Sbjct: 331 EPSLEETVSILRGIKEKYEVHHGVRISDPALIAAAQLSHRYIADRKLPDKAIDLVDEAAA 390
Query: 263 RVRL------------------------------------RHAQLPEEARELEKELR--- 283
R+R+ R +L +E +LE+E+R
Sbjct: 391 RLRMALESSPESIDALNRRKLQLEIEREALKKETDAESKFRLGELEKEIADLEEEIRKQQ 450
Query: 284 ---------------------QITKEKNEAVRGQDFEKAGELRDREM-DLKAQISALVDK 321
++ + +A R D KA LR E+ L+ +++ L D+
Sbjct: 451 AEWEAEREIMQKLRAAQQRLDEVRTQIEQAERAYDLNKAAPLRYGELPKLEQEVNELADR 510
Query: 322 GKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQ 381
M+ A+ V P+VTE DI IVS WTGIPV K+ E ++LL++E+ LHKRV+GQ
Sbjct: 511 ---MAGAQF----VRPMVTEEDIAAIVSRWTGIPVAKLMEGEREKLLRLEDELHKRVVGQ 563
Query: 382 DEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLD 441
DEA+ A++ AIRRAR GLK+PNRPI SF+F GPTGVGK+ELAK LAA F +EE M+R+D
Sbjct: 564 DEAIVAVADAIRRARAGLKDPNRPIGSFLFLGPTGVGKTELAKTLAASLFDTEENMVRID 623
Query: 442 MSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQI 501
MSE+ E+HTV++LIG+PPGYVGY EGGQLTEAVRRRPY+V+LFDEIEKAHPDVFN++LQ+
Sbjct: 624 MSEYQEKHTVARLIGAPPGYVGYEEGGQLTEAVRRRPYSVILFDEIEKAHPDVFNVLLQV 683
Query: 502 LEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVT 561
L+DGRLTD +GRTVDF+NT++I+TSN+GS +I +G + SY I+ V
Sbjct: 684 LDDGRLTDGQGRTVDFRNTVIILTSNIGSPLIFEG----------IQSGQSYETIRERVF 733
Query: 562 EELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRER 621
L+Q+FRPEFLNRLDE++VFR L + ++ I I L+ V RL + I L++++ +
Sbjct: 734 GVLQQHFRPEFLNRLDEIVVFRPLAREQIAAIVQIQLEAVRKRLAERRITLELSQEALDF 793
Query: 622 VVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIV 665
+ + GY+P +GARPL+R I R LE ++ K+LA E+ +G + V
Sbjct: 794 LAQRGYDPVFGARPLKRVIQRELETPLSRKILAGEVADGAHLYV 837
>sp|Q7CU92|CLPB_AGRT5 Chaperone protein ClpB OS=Agrobacterium tumefaciens (strain C58 /
ATCC 33970) GN=clpB PE=3 SV=2
Length = 874
Score = 722 bits (1864), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 368/704 (52%), Positives = 501/704 (71%), Gaps = 68/704 (9%)
Query: 24 TLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGL 83
L++Y +LT+ A EG+LDPV+GR +I R +Q+L RRTKNNP LIGEPGVGKTAIAEGL
Sbjct: 161 ALKKYARDLTEEAREGRLDPVIGRDDEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIAEGL 220
Query: 84 AQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIK-QSDEIILFIDE 142
A RI +GDVP++++ KK++ LDMG L+AG KYRGEFEERLK ++ E++ ++ IILFIDE
Sbjct: 221 ALRIVNGDVPESLKDKKLMALDMGALIAGAKYRGEFEERLKAVLNEVQAENGGIILFIDE 280
Query: 143 VHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVP 202
+HTL+GAG A+GA+DA+N+LKP+LARGEL C+GATTLDEYRKH+EKDPAL RRFQPV V
Sbjct: 281 MHTLVGAGKADGAMDASNLLKPALARGELHCVGATTLDEYRKHVEKDPALARRFQPVLVD 340
Query: 203 EPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGS 262
EP+V++TI IL+GL+E+YE HHK+R +D ALV+AA LS +YI+DRFLPDKAIDL+DEA S
Sbjct: 341 EPNVEDTISILRGLKEKYEQHHKVRISDSALVAAATLSNRYITDRFLPDKAIDLMDEAAS 400
Query: 263 RVRLRHAQLPEEARELEKELRQI----------------------------TKEKNEAVR 294
R+R++ PEE EL++ + Q+ T+EK +A+
Sbjct: 401 RLRMQVDSKPEELDELDRRIIQLKIEREALKQETDQSSVDRLRKLEDELADTEEKADALT 460
Query: 295 G------QDFEKAGELRDREMDLKAQISALVDKG-----------------KEMSKAET- 330
Q A +L+ R + + +++ G KE++ AE
Sbjct: 461 ARWQAEKQKLGHAADLKKRLDEARNELAIAQRNGQFQRAGELTYGIIPGLEKELAAAEAR 520
Query: 331 EAGDVGPVVTEV----DIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVK 386
++ G +V EV +I H+VS WTGIPV+K+ + ++LL+ME+ L K V+GQ EAV+
Sbjct: 521 DSSGAGSMVQEVVTPDNIAHVVSRWTGIPVDKMLEGQREKLLRMEDELAKSVVGQGEAVQ 580
Query: 387 AISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFM 446
A+S+A+RR+R GL++PNRPI SFIF GPTGVGK+EL K+LA + F E AM+RLDMSE+M
Sbjct: 581 AVSKAVRRSRAGLQDPNRPIGSFIFLGPTGVGKTELTKSLARFLFDDETAMVRLDMSEYM 640
Query: 447 ERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGR 506
E+H+V++LIG+PPGYVGY EGG LTEAVRRRPY VVLFDEIEKAHPDVFN++LQ+L+DGR
Sbjct: 641 EKHSVARLIGAPPGYVGYEEGGALTEAVRRRPYQVVLFDEIEKAHPDVFNVLLQVLDDGR 700
Query: 507 LTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQ 566
LTD +GRTVDFKNT++IMTSN+GS + + G D D+ DS ++ LV E ++
Sbjct: 701 LTDGQGRTVDFKNTIIIMTSNLGSEFMTQMG-------DNDDVDS----VRELVMERVRS 749
Query: 567 YFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEG 626
+FRPEFLNR+D++I+F +L + E+ I +I LK + L + I L++ E R + +G
Sbjct: 750 HFRPEFLNRIDDIILFHRLRRDEMGAIVEIQLKRLVSLLADRKITLELDEDARSWLANKG 809
Query: 627 YNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSD 670
Y+P+YGARPL+R I + ++D +AE +L EI +G V V +D
Sbjct: 810 YDPAYGARPLKRVIQKSVQDRLAEMILGGEIPDGSRVKVTSGTD 853
>sp|Q8YM56|CLPB2_NOSS1 Chaperone protein ClpB 2 OS=Nostoc sp. (strain PCC 7120 / UTEX
2576) GN=clpB2 PE=3 SV=2
Length = 872
Score = 720 bits (1859), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/713 (51%), Positives = 498/713 (69%), Gaps = 76/713 (10%)
Query: 21 KMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIA 80
K +LE+YG +LT+ A +G+LDPV+GR +I R +QIL RRTKNNP LIGEPGVGKTAIA
Sbjct: 159 KYQSLEKYGRDLTEAARKGQLDPVIGRDDEIRRTIQILSRRTKNNPVLIGEPGVGKTAIA 218
Query: 81 EGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSD-EIILF 139
EGLAQRI +GDVP +++ +K+I+LDMG ++AG K+RGEFEERLK +++E+ +S I+LF
Sbjct: 219 EGLAQRIVAGDVPQSLKDRKLISLDMGAMIAGAKFRGEFEERLKAVLKEVTESGGNIVLF 278
Query: 140 IDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPV 199
IDE+HT++GAGA +GA+DA N+LKP LARGEL+CIGATTLDEYRK+IEKD ALERRFQ V
Sbjct: 279 IDEIHTVVGAGATQGAMDAGNLLKPMLARGELRCIGATTLDEYRKYIEKDAALERRFQQV 338
Query: 200 KVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDE 259
V +PSV++TI IL+GL+ERYE+HH ++ +D +LV+AA LS +YISDRFLPDKAIDL+DE
Sbjct: 339 YVDQPSVEDTISILRGLKERYEVHHGVKISDSSLVAAATLSSRYISDRFLPDKAIDLVDE 398
Query: 260 AGSRVRLRHAQLPEEARE-----------------------------LEKELRQITKEK- 289
A +R+++ PEE E LEKEL + +E+
Sbjct: 399 AAARLKMEITSKPEELDEIDRKILQLEMEKLSLQKESDAASRERLERLEKELADLKEEQR 458
Query: 290 ------------------------------NEAVRGQDFEKAGELRDREM-DLKAQISAL 318
+A R D +A EL+ + DL ++ A
Sbjct: 459 TLNTQWQSEKDVINKLQSVKEEIDKVNLEIQQAERNYDLNRAAELKYGNLTDLHRRLEA- 517
Query: 319 VDKGKEMSKAE-TEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKR 377
+E+S+ + T + VTE DI I+S WTGIP+ K+ E ++LL +E+ LH R
Sbjct: 518 --TERELSQTQGTGKSLLREEVTEADIAEIISKWTGIPISKLVESEKEKLLHLEDELHHR 575
Query: 378 VIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAM 437
VIGQDEAV A++ AI+R+R GL +PNRP ASF+F GPTGVGK+ELAKALA+Y F +E+A+
Sbjct: 576 VIGQDEAVTAVADAIQRSRAGLADPNRPTASFVFLGPTGVGKTELAKALASYMFDTEDAL 635
Query: 438 IRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNM 497
+R+DMSE+ME+H VS+LIG+PPGYVGY EGGQLTE +RRRPY V+LFDEIEKAHPDVFN+
Sbjct: 636 VRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTETIRRRPYAVILFDEIEKAHPDVFNI 695
Query: 498 MLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIK 557
LQIL+DGR+TD++G TVDFKNT++IMTSN+GS I LD +S Y+ ++
Sbjct: 696 FLQILDDGRVTDAQGHTVDFKNTIIIMTSNIGSQYI----------LDIAGDNSRYDEMR 745
Query: 558 SLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTER 617
V E ++ FRPEFLNR+DE+I+F L K E+++I + ++ + RL + I L++++
Sbjct: 746 HRVMEAMRNSFRPEFLNRIDEVIIFHSLDKKELRQIVQLQVERLKARLDDRKISLRLSDV 805
Query: 618 FRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSD 670
+ + E GY+P +GARPL+RAI R LE +A+ +L E +GD++ VDV ++
Sbjct: 806 ALDFLAEVGYDPVFGARPLKRAIQRELETQIAKAILRGEFNDGDTIFVDVQNE 858
>sp|P42762|CLPD_ARATH Chaperone protein ClpD, chloroplastic OS=Arabidopsis thaliana
GN=CLPD PE=1 SV=1
Length = 945
Score = 720 bits (1859), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/679 (53%), Positives = 489/679 (72%), Gaps = 23/679 (3%)
Query: 10 GAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLI 69
G+G GG + N LE++ +LT A EG +DPV+GR+ +++RV+QIL RRTKNNP L+
Sbjct: 259 GSGPGGKKAKN---VLEQFCVDLTARASEGLIDPVIGREKEVQRVIQILCRRTKNNPILL 315
Query: 70 GEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEE 129
GE GVGKTAIAEGLA IA P + K++++LD+GLL+AG K RGE E R+ L+ E
Sbjct: 316 GEAGVGKTAIAEGLAISIAEASAPGFLLTKRIMSLDIGLLMAGAKERGELEARVTALISE 375
Query: 130 IKQSDEIILFIDEVHTLIGAGAAE-----GAIDAANILKPSLARGELQCIGATTLDEYRK 184
+K+S ++ILFIDEVHTLIG+G +D AN+LKPSL RGELQCI +TTLDE+R
Sbjct: 376 VKKSGKVILFIDEVHTLIGSGTVGRGNKGSGLDIANLLKPSLGRGELQCIASTTLDEFRS 435
Query: 185 HIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYI 244
EKD AL RRFQPV + EPS ++ ++IL GLRE+YE HH +YT EA+ +A LS +YI
Sbjct: 436 QFEKDKALARRFQPVLINEPSEEDAVKILLGLREKYEAHHNCKYTMEAIDAAVYLSSRYI 495
Query: 245 SDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGEL 304
+DRFLPDKAIDLIDEAGSR R+ + ++ E + ++K N+ Q+ + +
Sbjct: 496 ADRFLPDKAIDLIDEAGSRARIEAFR-----KKKEDAICILSKPPND--YWQEIKTVQAM 548
Query: 305 RDREMDLKAQIS---ALVDKGKEM---SKAETEAGDVGPV-VTEVDIQHIVSAWTGIPVE 357
+ + + + A+ D+ E+ S AGD P+ V DI + S W+GIPV+
Sbjct: 549 HEVVLSSRQKQDDGDAISDESGELVEESSLPPAAGDDEPILVGPDDIAAVASVWSGIPVQ 608
Query: 358 KVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGV 417
+++ DE L+ +E+ L RV+GQDEAV AISRA++R+RVGLK+P+RPIA+ +F GPTGV
Sbjct: 609 QITADERMLLMSLEDQLRGRVVGQDEAVAAISRAVKRSRVGLKDPDRPIAAMLFCGPTGV 668
Query: 418 GKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRR 477
GK+EL KALAA YFGSEE+M+RLDMSE+MERHTVSKLIGSPPGYVG+ EGG LTEA+RRR
Sbjct: 669 GKTELTKALAANYFGSEESMLRLDMSEYMERHTVSKLIGSPPGYVGFEEGGMLTEAIRRR 728
Query: 478 PYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGG 537
P+TVVLFDEIEKAHPD+FN++LQ+ EDG LTDS+GR V FKN L+IMTSNVGS I KG
Sbjct: 729 PFTVVLFDEIEKAHPDIFNILLQLFEDGHLTDSQGRRVSFKNALIIMTSNVGSLAIAKGR 788
Query: 538 R-RIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADI 596
IGF LD DE+ +SY +K+LV EELK YFRPE LNR+DE+++FRQL K ++ EI ++
Sbjct: 789 HGSIGFILDDDEEAASYTGMKALVVEELKNYFRPELLNRIDEIVIFRQLEKAQMMEILNL 848
Query: 597 MLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLARE 656
ML+++ RL + L+V+E +E + ++GY+P+YGARPLRR + ++ED ++E LA
Sbjct: 849 MLQDLKSRLVALGVGLEVSEPVKELICKQGYDPAYGARPLRRTVTEIVEDPLSEAFLAGS 908
Query: 657 IKEGDSVIVDVDSDGNVTV 675
K GD+ V +D GN +V
Sbjct: 909 FKPGDTAFVVLDDTGNPSV 927
>sp|Q74FF1|CLPB_GEOSL Chaperone protein ClpB OS=Geobacter sulfurreducens (strain ATCC
51573 / DSM 12127 / PCA) GN=clpB PE=3 SV=1
Length = 865
Score = 717 bits (1852), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 372/714 (52%), Positives = 507/714 (71%), Gaps = 72/714 (10%)
Query: 24 TLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGL 83
L +Y +LT LA +GKLDPV+GR +I RV+Q+L RRTKNNP LIGEPGVGKTAI EGL
Sbjct: 162 ALAKYARDLTDLARQGKLDPVIGRDDEIRRVLQVLSRRTKNNPVLIGEPGVGKTAIVEGL 221
Query: 84 AQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSD-EIILFIDE 142
AQRI SGDVP+T++ K+++ LDMG L+AG KYRGEFEERLK ++ E+ +S+ ++ILFIDE
Sbjct: 222 AQRIVSGDVPETLKDKRLVALDMGALIAGAKYRGEFEERLKAVIREVAKSEGKVILFIDE 281
Query: 143 VHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVP 202
+HTL+GAGAAEGA+DA+N+LKP+LARGEL CIGATTL+EYRK+IEKD ALERRFQ V
Sbjct: 282 LHTLVGAGAAEGAMDASNMLKPALARGELHCIGATTLNEYRKYIEKDAALERRFQQVYTG 341
Query: 203 EPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGS 262
EPSV++TI IL+GL+E+YE +H +R D A+++AA LS +YI+DRFLPDKAIDLIDEA S
Sbjct: 342 EPSVEDTIAILRGLKEKYENYHGIRIKDSAIIAAATLSDRYITDRFLPDKAIDLIDEAAS 401
Query: 263 RVRLRHAQLPEEARELEKELRQITKEKNEAVR-GQD---FEKAGELRD------------ 306
R+R+ +P E E+E+ + Q+ EK +R QD E+ +L D
Sbjct: 402 RLRIEIDSMPTEIDEVERRIIQLEIEKQALLRESQDPHSLERLKKLADELEELKAKSAEL 461
Query: 307 -----REMDLKAQISALV----DKGKEMSKAETEA----------GDVGPVVTEV----- 342
RE D+ ++S+L +K +E KAE E G++ + E+
Sbjct: 462 KGHWQREKDIIGRVSSLRQRLEEKREEAKKAEREGNLARTAEIRYGEIPAIEKEIADRSA 521
Query: 343 ---DIQ----------------HIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDE 383
DI+ IVS WTGIPV ++ E+D+L+ ME+ L RV+GQDE
Sbjct: 522 ELEDIRKEGKMLPEEVDGELVAEIVSRWTGIPVSRMMEGEADKLVHMEDRLITRVVGQDE 581
Query: 384 AVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMS 443
A+ ++ AIRRAR GL +PNRPI SF+F GPTGVGK+E AKALA + F ++A++R+DMS
Sbjct: 582 ALVLVANAIRRARSGLSDPNRPIGSFLFLGPTGVGKTETAKALAEFLFNDDQAIVRIDMS 641
Query: 444 EFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILE 503
E+ E+HTV++LIG+PPGYVGY EGGQLTEAVRRRPY++VLFDEIEKAHP+VFN++LQ+L+
Sbjct: 642 EYQEKHTVARLIGAPPGYVGYEEGGQLTEAVRRRPYSIVLFDEIEKAHPEVFNVLLQVLD 701
Query: 504 DGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEE 563
DGRLTD +GRTVDF+NT++IMTSN+GS I++ G S Y R+K++VTE
Sbjct: 702 DGRLTDGQGRTVDFRNTVIIMTSNLGSQWIQQYG------------SSDYARMKAMVTET 749
Query: 564 LKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVV 623
LK+ F+PEFLNR+DE++++ L ++K+I DI ++ + RL + I L+++++ RE +
Sbjct: 750 LKEGFKPEFLNRIDEIVIYHALPLEQIKKIVDIQVECLKQRLADRRIVLELSDKAREYLS 809
Query: 624 EEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTVLN 677
EGY+P+YGARPL+R I R ++D +A +L + +EGD+V VD+ G V+
Sbjct: 810 REGYDPAYGARPLKRTIQRKIQDPLALALLEGKFQEGDTVRVDLSVSGEELVIT 863
>sp|P74361|CLPB2_SYNY3 Chaperone protein ClpB 2 OS=Synechocystis sp. (strain PCC 6803 /
Kazusa) GN=clpB2 PE=3 SV=1
Length = 872
Score = 717 bits (1851), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/724 (51%), Positives = 497/724 (68%), Gaps = 81/724 (11%)
Query: 21 KMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIA 80
K +LE+YG +LT+LA EGKLDPV+GR ++ R +QIL RRTKNNP LIGEPGVGKTAIA
Sbjct: 159 KYESLEKYGRDLTELAREGKLDPVIGRDEEVRRTIQILSRRTKNNPVLIGEPGVGKTAIA 218
Query: 81 EGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSD-EIILF 139
EGLAQRI + DVP+++ +K+I+LDMG L+AG KYRGEFEERLK +++E+ S +IILF
Sbjct: 219 EGLAQRIINHDVPESLRDRKLISLDMGALIAGAKYRGEFEERLKAVLKEVTDSQGQIILF 278
Query: 140 IDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPV 199
IDE+HT++GAGA +GA+DA N+LKP LARG L+CIGATTLDEYRK+IEKD ALERRFQ V
Sbjct: 279 IDEIHTVVGAGATQGAMDAGNLLKPMLARGALRCIGATTLDEYRKYIEKDAALERRFQEV 338
Query: 200 KVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDE 259
V EP+V +TI IL+GL+ERYE+HH ++ D ALV+AA LS +YISDRFLPDKAIDL+DE
Sbjct: 339 LVDEPNVLDTISILRGLKERYEVHHGVKIADSALVAAAMLSNRYISDRFLPDKAIDLVDE 398
Query: 260 AGSRVRLRHAQLPEEARE-----------------------------LEKELR------- 283
A +++++ PEE E LEKEL
Sbjct: 399 AAAKLKMEITSKPEELDEVDRKILQLEMERLSLQRENDSASKERLEKLEKELADFKEEQS 458
Query: 284 ------------------------QITKEKNEAVRGQDFEKAGELRDREM-DLKAQISAL 318
Q+ E +A R D+ KA EL+ ++ DL+ Q+ AL
Sbjct: 459 KLNGQWQSEKTVIDQIRTVKETIDQVNLEIQQAQRDYDYNKAAELQYGKLTDLQRQVEAL 518
Query: 319 VDKGKEMSKAETEAGDVGPV---VTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLH 375
E AE + + V E DI I+S WTGIP+ K+ E ++LL +E+ LH
Sbjct: 519 -----ETQLAEQQTSGKSLLREEVLESDIAEIISKWTGIPISKLVESEKEKLLHLEDELH 573
Query: 376 KRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEE 435
RVIGQDEAV A++ AI+R+R GL +PNRP ASFIF GPTGVGK+ELAKALA F +EE
Sbjct: 574 SRVIGQDEAVTAVAEAIQRSRAGLSDPNRPTASFIFLGPTGVGKTELAKALAKNLFDTEE 633
Query: 436 AMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVF 495
A++R+DMSE+ME+H VS+L+G+PPGYVGY EGGQLTEA+RRRPY+V+LFDEIEKAH DVF
Sbjct: 634 ALVRIDMSEYMEKHAVSRLMGAPPGYVGYEEGGQLTEAIRRRPYSVILFDEIEKAHGDVF 693
Query: 496 NMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNR 555
N+MLQIL+DGRLTD++G VDFKNT++IMTSN+GS I LD DS Y
Sbjct: 694 NVMLQILDDGRLTDAQGHVVDFKNTIIIMTSNLGSQYI----------LDVAGDDSRYEE 743
Query: 556 IKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVT 615
++S V + +++ FRPEFLNR+DE I+F L K E++ I I ++ + RL+ + + L++T
Sbjct: 744 MRSRVMDVMRENFRPEFLNRVDETIIFHGLQKSELRSIVQIQIQSLATRLEEQKLTLKLT 803
Query: 616 ERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVD-VDSDGNVT 674
++ + + GY+P YGARPL+RA+ + LE ++A+ +L + K G++++VD D + T
Sbjct: 804 DKALDFLAAVGYDPVYGARPLKRAVQKYLETAIAKGILRGDYKPGETIVVDETDERLSFT 863
Query: 675 VLNG 678
L G
Sbjct: 864 SLRG 867
>sp|Q7U637|CLPB1_SYNPX Chaperone protein ClpB 1 OS=Synechococcus sp. (strain WH8102)
GN=clpB1 PE=3 SV=2
Length = 862
Score = 714 bits (1843), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 370/730 (50%), Positives = 509/730 (69%), Gaps = 77/730 (10%)
Query: 7 EAVGAGVGGGSSGNKMP-----TLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRR 61
EA+ A G + ++ P +L +YG +LT A +G+LDPV+GR +I R +QIL RR
Sbjct: 139 EAITAVRGNQTVTDQNPEATYESLAKYGRDLTAAARDGQLDPVIGRDEEIRRTIQILSRR 198
Query: 62 TKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEE 121
TKNNP LIGEPGVGKTAI EGLAQRI +GDVP ++ +++ITLDMG L+AG KYRGEFEE
Sbjct: 199 TKNNPVLIGEPGVGKTAIVEGLAQRIVNGDVPQALQNRQLITLDMGALIAGAKYRGEFEE 258
Query: 122 RLKKLMEEIKQSD-EIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180
RLK +++E+ SD +I+LFIDE+HT++GAGA+ GA+DA+N+LKP LARGEL+CIGATTLD
Sbjct: 259 RLKAVLKEVTTSDGQIVLFIDEIHTVVGAGASGGAMDASNLLKPMLARGELRCIGATTLD 318
Query: 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240
E+R+HIEKDPALERRFQ V V +P+V +TI IL+GL+ERYE+HH +R D ALV+AA LS
Sbjct: 319 EHRQHIEKDPALERRFQQVLVDQPTVPDTISILRGLKERYEVHHGVRIADSALVAAAMLS 378
Query: 241 YQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDF-- 298
+YI+DRFLPDKAIDL+DE+ +R+++ PE+ E+++++ Q+ EK R D
Sbjct: 379 SRYITDRFLPDKAIDLVDESAARLKMEITSKPEQIDEIDRKILQLEMEKLSLGRESDSAS 438
Query: 299 --------EKAGELRDREMDLKAQ----------ISAL----------VDKGK---EMSK 327
+ EL +++ L AQ +SAL V++ K +++K
Sbjct: 439 QERLQRIERELAELGEQQSSLNAQWQSEKGAIDQLSALKEEIERVQLQVEQAKRNYDLNK 498
Query: 328 A-ETEAGDVGPV-------------------------VTEVDIQHIVSAWTGIPVEKVST 361
A E E G + + VTE DI +++ WTGIPV ++
Sbjct: 499 AAELEYGTLATLQRQLQEQEDLLEDEDGTDKTLLREEVTEDDIAEVIAKWTGIPVARLVQ 558
Query: 362 DESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSE 421
E ++LL++E+ LH+RVIGQ++AV A++ AI+R+R GL +PNRPIASF+F GPTGVGK+E
Sbjct: 559 SEMEKLLQLEDDLHQRVIGQNQAVTAVADAIQRSRAGLSDPNRPIASFLFLGPTGVGKTE 618
Query: 422 LAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTV 481
L+KALA F S++AM+R+DMSE+ME+HTVS+LIG+PPGYVGY GGQLTEAVRRRPY V
Sbjct: 619 LSKALANRLFDSDDAMVRIDMSEYMEKHTVSRLIGAPPGYVGYEAGGQLTEAVRRRPYAV 678
Query: 482 VLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGS-SVIEKGGRRI 540
+LFDE+EKAHPDVFN+MLQIL+DGR+TD +GRTVDF NT+LI+TSN+GS S++E G
Sbjct: 679 ILFDEVEKAHPDVFNVMLQILDDGRVTDGQGRTVDFTNTVLILTSNIGSQSILELAG--- 735
Query: 541 GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 600
+ ++ V E LK FRPEFLNRLD+ I+FR L K E++ I + ++
Sbjct: 736 --------DPEQHTAMEQRVNEALKAKFRPEFLNRLDDQIIFRSLEKEELRRIVSLQVER 787
Query: 601 VFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEG 660
+ RL+ + ++LQ+++ + + G++P YGARPL+RAI R LE +A+ +LA ++ EG
Sbjct: 788 LRSRLEQRKLDLQLSDIAADWLATIGFDPVYGARPLKRAIQRELETPIAKAILAGQLSEG 847
Query: 661 DSVIVDVDSD 670
+V VD D
Sbjct: 848 QTVQVDAGDD 857
>sp|Q98G96|CLPB_RHILO Chaperone protein ClpB OS=Rhizobium loti (strain MAFF303099)
GN=clpB PE=3 SV=1
Length = 868
Score = 714 bits (1842), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 371/722 (51%), Positives = 492/722 (68%), Gaps = 78/722 (10%)
Query: 10 GAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLI 69
G S+ L++Y +LT A GKLDPV+GR +I R +Q+L RRTKNNP LI
Sbjct: 147 GRTADSASAEQNYDALKKYARDLTADARAGKLDPVIGRDDEIRRTIQVLSRRTKNNPVLI 206
Query: 70 GEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEE 129
GEPGVGKTAIAEGLA RI +GDVP++++ K+++ LDMG L+AG KYRGEFEERLK ++ E
Sbjct: 207 GEPGVGKTAIAEGLALRIVNGDVPESLKDKQLMALDMGALIAGAKYRGEFEERLKAVLSE 266
Query: 130 IKQSD-EIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEK 188
+ ++ IILFIDE+HTL+GAG A+GA+DA+N+LKP+LARGEL C+GATTLDEYRKH+EK
Sbjct: 267 VTSANGNIILFIDEMHTLVGAGKADGAMDASNLLKPALARGELHCVGATTLDEYRKHVEK 326
Query: 189 DPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRF 248
DPAL RRFQPV V EP+V++T+ IL+GL+E+YE HHK+R +D ALV+AA LS +YI+DRF
Sbjct: 327 DPALARRFQPVFVDEPTVEDTVSILRGLKEKYEQHHKVRISDSALVAAATLSNRYIADRF 386
Query: 249 LPDKAIDLIDEAGSRVRLRHAQLPEEARE-----------------------------LE 279
LPDKAIDL+DEA SR+R++ PE E LE
Sbjct: 387 LPDKAIDLVDEAASRLRMQVDSKPEALDEIDRRIMQLKIEREALKVETDDASKDRLVRLE 446
Query: 280 KEL----------------------------RQITKEKNE---AVRGQDFEKAGELRDRE 308
KEL +Q+ + +NE A R +F++AGEL
Sbjct: 447 KELVGLEEESTEITAKWQAEKQKLGLAADLKKQLDEARNELAIAQRKGEFQRAGEL---- 502
Query: 309 MDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLL 368
+I L K KE + +AG V VVT + HIVS WTGIPV+K+ E D+LL
Sbjct: 503 --AYGKIPELEKKLKEAEAQDGKAGMVEEVVTPDHVAHIVSRWTGIPVDKMLQGERDKLL 560
Query: 369 KMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAA 428
+ME+ + KRV+GQ EAV+A+S+A+RRAR GL++PNRPI SFIF GPTGVGK+EL KALA+
Sbjct: 561 RMEDEIGKRVVGQGEAVQAVSKAVRRARAGLQDPNRPIGSFIFLGPTGVGKTELTKALAS 620
Query: 429 YYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIE 488
+ F + AM+R+DMSEFME+H+V++LIG+PPGYVGY EGG LTEAVRRRPY VVLFDEIE
Sbjct: 621 FLFDDDSAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGALTEAVRRRPYQVVLFDEIE 680
Query: 489 KAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDE 548
KAHPDVFN++LQ+L+DGRLTD +GRTVDF+NTL+IMTSN+G+ + G
Sbjct: 681 KAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTLIIMTSNLGAEYLVNLG----------- 729
Query: 549 KDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTK 608
+D + ++ V ++ FRPEFLNR+DE+I+F +L + ++ I +I K + L +
Sbjct: 730 EDQDVDAVRDEVMGVVRASFRPEFLNRVDEVILFHRLRRKDMDRIVEIQFKRLESLLVDR 789
Query: 609 DIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVD 668
I L + E + +GY+P+YGARPL+R + + L+D +AEK+L EI +G +V V
Sbjct: 790 KITLSLDHEAIEWLAAKGYDPAYGARPLKRVMQKELQDPLAEKILLGEILDGSTVKVTSG 849
Query: 669 SD 670
SD
Sbjct: 850 SD 851
>sp|Q7V8B1|CLPB_PROMM Chaperone protein ClpB OS=Prochlorococcus marinus (strain MIT 9313)
GN=clpB PE=3 SV=1
Length = 865
Score = 712 bits (1838), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 370/708 (52%), Positives = 500/708 (70%), Gaps = 73/708 (10%)
Query: 24 TLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGL 83
+LE+YG +L+ A EGKLDPV+GR +I R +QIL RRTKNNP LIGEPGVGKTAI EGL
Sbjct: 161 SLEKYGRDLSAAAREGKLDPVIGRDDEIRRTIQILSRRTKNNPVLIGEPGVGKTAIVEGL 220
Query: 84 AQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSD-EIILFIDE 142
AQRI +GDVP ++ +++ITLDMG L+AG KYRGEFEERLK +++E+ S+ +I+LFIDE
Sbjct: 221 AQRIVNGDVPAALQNRQLITLDMGALIAGAKYRGEFEERLKAVLKEVTASEGQIVLFIDE 280
Query: 143 VHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVP 202
+HT++GAGA GA+DA+N+LKP LARGEL+CIGATTLDE+R+HIEKDPALERRFQ V V
Sbjct: 281 IHTVVGAGATGGAMDASNLLKPMLARGELRCIGATTLDEHRQHIEKDPALERRFQQVLVD 340
Query: 203 EPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGS 262
+P+V +TI IL+GL+ERYE+HH +R D ALV+AA LS +YI+DRFLPDKAIDL+DE+ +
Sbjct: 341 QPTVQDTISILRGLKERYEVHHGVRIADNALVAAAVLSSRYIADRFLPDKAIDLMDESAA 400
Query: 263 RVRLRHAQLPEEARELEKELRQITKEK------NEAVRGQDFEKA----GELRDREMDLK 312
R+++ PEE E+++++ Q+ EK +++V + EK EL +++ L
Sbjct: 401 RLKMEITSKPEEIDEIDRKIVQLEMEKLSLGRESDSVSKERLEKLERELAELAEQQSALN 460
Query: 313 AQ----------ISAL-------------------VDKG------------KEMSKAET- 330
AQ +S+L ++K K++S+ ET
Sbjct: 461 AQWQQEKGAIDDLSSLKEEIERVQLQVEQAKRSYDLNKAAELEYGTLAGLQKQLSEKETA 520
Query: 331 -----EAGDVGPV---VTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQD 382
EAGD + VTE DI +++ WTGIPV K+ E ++LL +E LH+RVIGQ+
Sbjct: 521 LAQDGEAGDKSLLREEVTEDDIADVIAKWTGIPVAKLVQSEMEKLLGLEAELHQRVIGQE 580
Query: 383 EAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDM 442
+AV+A++ AI+R+R GL +PNRPIASF+F GPTGVGK+EL+KALA+ F SE A++R+DM
Sbjct: 581 QAVQAVADAIQRSRAGLSDPNRPIASFLFLGPTGVGKTELSKALASQLFDSEAALVRIDM 640
Query: 443 SEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQIL 502
SE+ME+H+VS+LIG+PPGYVGY GGQLTEAVRRRPY V+LFDE+EKAH DVFN+MLQIL
Sbjct: 641 SEYMEKHSVSRLIGAPPGYVGYEAGGQLTEAVRRRPYAVILFDEVEKAHQDVFNVMLQIL 700
Query: 503 EDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTE 562
+DGR+TD +GRTVDF NT+LI+TSN+GS I LD DS Y ++ V +
Sbjct: 701 DDGRVTDGQGRTVDFTNTVLILTSNIGSQSI----------LDLGGDDSQYREMERRVHD 750
Query: 563 ELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERV 622
L +FRPEFLNRLDE I+F L + E+++I + + + +RL + + L++++ + +
Sbjct: 751 ALHAHFRPEFLNRLDETIIFHSLRREELRQIVALQVNRLRERLCDRKLGLEISDTAADWL 810
Query: 623 VEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSD 670
GY+P YGARPL+RAI R LE +A+ +LA GDS IV VD D
Sbjct: 811 ANAGYDPVYGARPLKRAIQRELETPIAKSILAGLY--GDSQIVHVDVD 856
>sp|Q6H795|CLPD1_ORYSJ Chaperone protein ClpD1, chloroplastic OS=Oryza sativa subsp.
japonica GN=CLPD1 PE=2 SV=1
Length = 938
Score = 708 bits (1828), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/661 (54%), Positives = 485/661 (73%), Gaps = 13/661 (1%)
Query: 24 TLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGL 83
L+++ +LT A G +DP++GR+ +IERVVQI+ RRTKNNP L+GE GVGKTAIAEGL
Sbjct: 265 ALDQFCLDLTTQASGGFIDPIIGREEEIERVVQIICRRTKNNPILLGEAGVGKTAIAEGL 324
Query: 84 AQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEV 143
A RIA+GDVP + K++++LD+GLL+AG K RGE E R+ L+ E++++ ++ILFIDEV
Sbjct: 325 ALRIANGDVPIYLVAKRIMSLDVGLLIAGAKERGELESRVTSLIREVREAGDVILFIDEV 384
Query: 144 HTLIGAGA---AEGA-IDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPV 199
H LIG+G +GA +D N+LKP LARGELQCI ATTLDE+R H EKD AL RRFQPV
Sbjct: 385 HNLIGSGTVGKGKGAGLDIGNLLKPPLARGELQCIAATTLDEHRMHFEKDKALARRFQPV 444
Query: 200 KVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDE 259
V EPS D+ ++IL GLRE+YE +HK ++T EA+ +A LS +YI DR LPDKAIDLIDE
Sbjct: 445 LVEEPSQDDAVKILLGLREKYETYHKCKFTLEAINAAVYLSARYIPDRQLPDKAIDLIDE 504
Query: 260 AGSRVRLRHAQLPEEARE--LEKELRQITKEKNEAVRGQDFEKAGELR--DREMDLKAQI 315
AGSR R+ +E + L K + +E A + + +++ R+ + A I
Sbjct: 505 AGSRARMESFNRKKEGQSSILLKSPDEYWQEIRAAQNMHEVVSSNQMKYSPRQENGSAAI 564
Query: 316 SALVDKGKEMSKAETEAGDVGPVVTEVD-IQHIVSAWTGIPVEKVSTDESDRLLKMEETL 374
A ++M++ +E P+V + I + S W+GIPV++++ D+ L+ ++ L
Sbjct: 565 KA---PSEDMNELTSELQVEEPIVVGTEEIARVASLWSGIPVQQLTADDRKLLVGLDGEL 621
Query: 375 HKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSE 434
KRVIGQD+AV AISRA++R+RVGL +P+RPIA+ +F GPTGVGK+EL KALAA YFGSE
Sbjct: 622 RKRVIGQDDAVMAISRAVKRSRVGLNDPDRPIATLLFCGPTGVGKTELTKALAASYFGSE 681
Query: 435 EAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDV 494
AM+RLDMSE+MERHTVSKLIGSPPGY+GY E G LTEAVRR+P+TVVL DEIEKAHPD+
Sbjct: 682 SAMLRLDMSEYMERHTVSKLIGSPPGYIGYGETGTLTEAVRRKPFTVVLLDEIEKAHPDI 741
Query: 495 FNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYN 554
FN++LQI EDG L+DS+GR V FKNTL++MTSN+GS+ I KG R +GF + D + SSY
Sbjct: 742 FNILLQIFEDGHLSDSQGRRVSFKNTLIVMTSNIGSTSISKGRRSMGF-MTEDTESSSYV 800
Query: 555 RIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQV 614
+KSLV EELK +FRPE LNR+DEM+VFR L K ++ I DI+L+EV RL I L+V
Sbjct: 801 AMKSLVMEELKAFFRPELLNRIDEMVVFRPLEKTQMLAILDIILQEVKGRLLALGIGLEV 860
Query: 615 TERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVT 674
++ ++ + EEGY+ SYGARPLRRA+ L+ED ++E +L E K GD++++D+D+ G +
Sbjct: 861 SDAMKDLICEEGYDKSYGARPLRRAVTHLIEDVISEAILFGEYKPGDTILMDIDAGGKLC 920
Query: 675 V 675
+
Sbjct: 921 M 921
>sp|Q7N788|CLPB_PHOLL Chaperone protein ClpB OS=Photorhabdus luminescens subsp. laumondii
(strain TT01) GN=clpB PE=3 SV=1
Length = 857
Score = 708 bits (1827), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 364/704 (51%), Positives = 500/704 (71%), Gaps = 71/704 (10%)
Query: 24 TLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGL 83
L++Y +LT+ AE+GKLDPV+GR +I R +Q+L RRTKNNP LIGEPGVGKTAI EGL
Sbjct: 160 ALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGL 219
Query: 84 AQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEI-KQSDEIILFIDE 142
AQRI +G+VP+ ++ K+V++LDMG L+AG KYRGEFEERLK ++ ++ KQ +ILFIDE
Sbjct: 220 AQRIINGEVPEGLKNKRVLSLDMGALLAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDE 279
Query: 143 VHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVP 202
+HT++GAG A+GA+DA N+LKP+LARGEL C+GATTLDEYR++IEKD ALERRFQ V V
Sbjct: 280 LHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVYVA 339
Query: 203 EPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGS 262
EPSV++TI IL+GL+ERYE+HH ++ TD A+V+AA LS++YISDR LPDKAIDLIDEAG+
Sbjct: 340 EPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYISDRMLPDKAIDLIDEAGA 399
Query: 263 RVRLRHAQLPEEARELEKELRQITKEKNEAVRGQD--FEKAGELRDREM----------- 309
+R++ PE LE+ + Q+ E+ + D +K E+ + E+
Sbjct: 400 SLRMQMDSKPEALDRLERRVIQLKLEQQALKKESDDASKKRLEMLNEELLVKEREYSELE 459
Query: 310 -DLKAQISALVDKGKEMSKAETE-----------AGDVGPV------------------- 338
+ KA+ +AL G + KAE E +GD+ +
Sbjct: 460 EEWKAEKAALT--GTQHIKAELENARISLEQARRSGDLAKMSEIQYGKIPGLEKQLAAAT 517
Query: 339 -------------VTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAV 385
VT+ +I I++ WTGIPV ++ E D+LL+ME+ LHKRVIGQDEAV
Sbjct: 518 QAESKHMKLLRNKVTDAEIADILARWTGIPVARMLESEKDKLLRMEQELHKRVIGQDEAV 577
Query: 386 KAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEF 445
AIS AIRR+R GL +PNRPI SF+F GPTGVGK+EL KALA + F S++AM+R+DMSEF
Sbjct: 578 NAISNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFLFDSDDAMVRIDMSEF 637
Query: 446 MERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDG 505
ME+H VS+L+G+PPGYVGY EGG LTEAVRRRPY+V+L DE+EKAH DVFN++LQ+L+DG
Sbjct: 638 MEKHAVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHSDVFNILLQVLDDG 697
Query: 506 RLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELK 565
RLTD +GRTVDF+NT++IMTSN+GS +I++ R G L+YDE +K +V +
Sbjct: 698 RLTDGQGRTVDFRNTVVIMTSNLGSDMIQE---RFG-SLNYDE-------MKDIVMGIVS 746
Query: 566 QYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEE 625
FRPEF+NR+DE +VF L + + IADI L+ ++ RL+ + ++ +T++ E + E
Sbjct: 747 HNFRPEFINRIDEAVVFHPLGRRHLSAIADIQLQRLYKRLEERGYQVTITQQALEILAEA 806
Query: 626 GYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDS 669
G++P YGARPL+RAI + +E+ +A+K+L+ ++ G V +DV++
Sbjct: 807 GFDPVYGARPLKRAIQQEIENPLAQKILSGQLLPGKPVTLDVEN 850
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.135 0.370
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 257,829,194
Number of Sequences: 539616
Number of extensions: 11577126
Number of successful extensions: 53188
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 309
Number of HSP's successfully gapped in prelim test: 2041
Number of HSP's that attempted gapping in prelim test: 48690
Number of HSP's gapped (non-prelim): 5203
length of query: 693
length of database: 191,569,459
effective HSP length: 125
effective length of query: 568
effective length of database: 124,117,459
effective search space: 70498716712
effective search space used: 70498716712
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 65 (29.6 bits)