Query 005511
Match_columns 693
No_of_seqs 319 out of 3658
Neff 9.3
Searched_HMMs 13730
Date Tue Mar 26 18:30:29 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/005511.a3m -d /local_scratch/syshi/scop70.hhm -v 0 -o /local_scratch/syshi/H1_2018-2022//hhsearch_scop/005511hhsearch_scop
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1qvra3 c.37.1.20 (A:536-850) 100.0 0 0 353.3 32.3 309 354-672 1-309 (315)
2 d1r6bx3 c.37.1.20 (X:437-751) 100.0 0 0 343.4 30.9 311 355-679 1-312 (315)
3 d1qvra2 c.37.1.20 (A:149-535) 100.0 7.1E-42 0 301.9 30.2 301 22-323 2-306 (387)
4 d1r6bx2 c.37.1.20 (X:169-436) 100.0 2.4E-37 1.8E-41 270.6 25.0 245 25-269 1-246 (268)
5 d1um8a_ c.37.1.20 (A:) ClpX {H 100.0 1.8E-36 1.3E-40 264.6 22.8 284 367-668 8-352 (364)
6 d1jbka_ c.37.1.20 (A:) ClpB, A 100.0 5E-29 3.6E-33 213.4 14.7 193 22-214 2-195 (195)
7 d1ofha_ c.37.1.20 (A:) HslU {H 100.0 8.3E-28 6.1E-32 205.0 20.6 257 368-667 6-288 (309)
8 d1g41a_ c.37.1.20 (A:) HslU {H 99.9 2.7E-25 2E-29 187.7 23.0 153 479-668 250-423 (443)
9 d1ixza_ c.37.1.20 (A:) AAA dom 99.9 7.7E-26 5.6E-30 191.4 19.6 199 39-264 6-229 (247)
10 d1lv7a_ c.37.1.20 (A:) AAA dom 99.9 2.6E-25 1.9E-29 187.8 20.7 198 39-263 9-231 (256)
11 d1e32a2 c.37.1.20 (A:201-458) 99.9 1E-24 7.4E-29 183.7 16.2 198 40-264 2-222 (258)
12 d1iqpa2 c.37.1.20 (A:2-232) Re 99.9 3.5E-23 2.6E-27 173.1 16.0 208 22-261 4-215 (231)
13 d1r7ra3 c.37.1.20 (A:471-735) 99.9 4.2E-24 3.1E-28 179.5 10.3 200 39-265 4-229 (265)
14 d1njfa_ c.37.1.20 (A:) delta p 99.9 5.9E-22 4.3E-26 164.7 21.0 200 32-262 2-222 (239)
15 d1sxjb2 c.37.1.20 (B:7-230) Re 99.9 3.7E-23 2.7E-27 173.0 13.4 198 29-262 2-208 (224)
16 d1in4a2 c.37.1.20 (A:17-254) H 99.9 2.7E-21 2E-25 160.1 22.0 191 34-267 1-217 (238)
17 d1sxjc2 c.37.1.20 (C:12-238) R 99.9 6.5E-23 4.8E-27 171.3 13.7 197 30-262 2-206 (227)
18 d1sxjd2 c.37.1.20 (D:26-262) R 99.9 5E-22 3.7E-26 165.2 15.9 207 31-265 1-218 (237)
19 d1ny5a2 c.37.1.20 (A:138-384) 99.9 2.3E-20 1.7E-24 153.7 22.5 228 377-645 1-231 (247)
20 d1lv7a_ c.37.1.20 (A:) AAA dom 99.9 2.3E-20 1.7E-24 153.7 19.4 199 375-646 11-231 (256)
21 d1ixza_ c.37.1.20 (A:) AAA dom 99.9 2E-20 1.5E-24 154.1 15.6 199 375-646 8-228 (247)
22 d1ixsb2 c.37.1.20 (B:4-242) Ho 99.8 2.1E-19 1.5E-23 147.1 19.6 186 36-263 3-214 (239)
23 d1sxje2 c.37.1.20 (E:4-255) Re 99.8 4.5E-20 3.3E-24 151.7 15.7 208 32-262 1-239 (252)
24 d1sxja2 c.37.1.20 (A:295-547) 99.8 1.4E-20 1E-24 155.1 12.9 197 32-261 4-231 (253)
25 d1in4a2 c.37.1.20 (A:17-254) H 99.8 5E-18 3.7E-22 137.6 22.8 181 374-625 7-195 (238)
26 d1e32a2 c.37.1.20 (A:201-458) 99.8 3.5E-19 2.5E-23 145.6 16.7 205 375-652 3-227 (258)
27 d1ofha_ c.37.1.20 (A:) HslU {H 99.8 3.2E-19 2.3E-23 145.9 15.8 158 43-215 15-212 (309)
28 d1w5sa2 c.37.1.20 (A:7-293) CD 99.8 6.9E-18 5.1E-22 136.7 20.5 229 31-267 8-270 (287)
29 d1d2na_ c.37.1.20 (A:) Hexamer 99.8 7.6E-19 5.6E-23 143.3 14.8 181 39-243 6-205 (246)
30 d1fnna2 c.37.1.20 (A:1-276) CD 99.8 6.6E-16 4.8E-20 123.0 25.1 220 30-267 7-256 (276)
31 d1r7ra3 c.37.1.20 (A:471-735) 99.8 1.2E-18 8.9E-23 141.8 11.0 204 375-650 6-231 (265)
32 d1njfa_ c.37.1.20 (A:) delta p 99.8 5.2E-18 3.8E-22 137.5 13.7 198 369-641 5-215 (239)
33 d1ixsb2 c.37.1.20 (B:4-242) Ho 99.8 1.1E-16 8.2E-21 128.3 20.3 181 374-625 7-196 (239)
34 d1r6bx3 c.37.1.20 (X:437-751) 99.8 4.2E-16 3.1E-20 124.4 21.6 198 13-240 1-258 (315)
35 d1iqpa2 c.37.1.20 (A:2-232) Re 99.8 1.3E-17 9.6E-22 134.7 13.3 191 369-641 17-209 (231)
36 d1sxjc2 c.37.1.20 (C:12-238) R 99.7 2.4E-17 1.8E-21 132.9 13.3 186 369-641 7-199 (227)
37 d1sxjb2 c.37.1.20 (B:7-230) Re 99.7 1E-16 7.4E-21 128.6 15.5 186 369-641 8-201 (224)
38 d1sxjd2 c.37.1.20 (D:26-262) R 99.7 6E-17 4.4E-21 130.2 13.4 198 372-641 8-208 (237)
39 d1w44a_ c.37.1.11 (A:) NTPase 99.7 1.4E-20 1E-24 155.3 -6.5 185 20-218 79-275 (321)
40 d1d2na_ c.37.1.20 (A:) Hexamer 99.7 2.6E-17 1.9E-21 132.7 10.1 165 372-595 5-185 (246)
41 d1qvra3 c.37.1.20 (A:536-850) 99.7 7.1E-16 5.1E-20 122.8 17.2 199 17-240 6-263 (315)
42 d1um8a_ c.37.1.20 (A:) ClpX {H 99.7 2.8E-15 2.1E-19 118.7 19.8 203 20-242 3-316 (364)
43 d1sxje2 c.37.1.20 (E:4-255) Re 99.7 1.4E-15 1E-19 120.7 16.4 198 374-641 9-232 (252)
44 d1a5ta2 c.37.1.20 (A:1-207) de 99.7 1.1E-15 7.7E-20 121.6 14.5 186 379-641 5-203 (207)
45 d1g8pa_ c.37.1.20 (A:) ATPase 99.7 1.3E-15 9.2E-20 121.1 14.3 170 375-594 6-211 (333)
46 d1a5ta2 c.37.1.20 (A:1-207) de 99.7 6.1E-15 4.4E-19 116.4 16.6 180 45-257 5-205 (207)
47 d1sxja2 c.37.1.20 (A:295-547) 99.7 1.5E-15 1.1E-19 120.6 13.0 208 370-641 8-225 (253)
48 d1g8pa_ c.37.1.20 (A:) ATPase 99.6 7.9E-14 5.7E-18 108.7 18.4 163 40-216 5-214 (333)
49 d1l8qa2 c.37.1.20 (A:77-289) C 99.6 3.4E-14 2.5E-18 111.2 16.0 182 39-240 7-197 (213)
50 d1g41a_ c.37.1.20 (A:) HslU {H 99.6 4.2E-13 3E-17 103.7 19.6 77 43-130 15-106 (443)
51 d1w5sa2 c.37.1.20 (A:7-293) CD 99.6 6.1E-13 4.4E-17 102.6 19.7 229 376-648 16-264 (287)
52 d1r6bx2 c.37.1.20 (X:169-436) 99.6 3.1E-13 2.2E-17 104.7 17.5 205 376-654 18-244 (268)
53 d1fnna2 c.37.1.20 (A:1-276) CD 99.5 1.2E-12 8.7E-17 100.6 18.9 201 375-625 15-225 (276)
54 d1w44a_ c.37.1.11 (A:) NTPase 99.5 4.1E-15 3E-19 117.6 6.3 138 404-598 121-274 (321)
55 d1qvra2 c.37.1.20 (A:149-535) 99.5 1E-12 7.3E-17 101.1 13.6 181 375-625 21-219 (387)
56 d2gnoa2 c.37.1.20 (A:11-208) g 99.4 3.2E-12 2.3E-16 97.6 13.3 132 50-205 2-139 (198)
57 d2gnoa2 c.37.1.20 (A:11-208) g 99.4 5.9E-12 4.3E-16 95.8 11.9 130 407-601 16-152 (198)
58 d1l8qa2 c.37.1.20 (A:77-289) C 99.3 6.2E-11 4.5E-15 88.8 16.4 169 408-643 38-210 (213)
59 d1ny5a2 c.37.1.20 (A:138-384) 99.3 1.5E-10 1.1E-14 86.2 18.1 172 43-237 1-211 (247)
60 d1jbka_ c.37.1.20 (A:) ClpB, A 99.3 5E-12 3.7E-16 96.3 9.1 153 376-594 22-194 (195)
61 d2fnaa2 c.37.1.20 (A:1-283) Ar 99.2 2.6E-08 1.9E-12 70.7 21.6 180 40-243 10-241 (283)
62 d1svma_ c.37.1.20 (A:) Papillo 99.1 5.9E-11 4.3E-15 88.9 7.2 141 367-528 122-265 (362)
63 d1svma_ c.37.1.20 (A:) Papillo 99.1 1E-09 7.4E-14 80.4 11.8 165 44-245 133-320 (362)
64 d1gvnb_ c.37.1.21 (B:) Plasmid 98.5 1.6E-07 1.1E-11 65.4 7.4 37 63-109 32-68 (273)
65 d2a5yb3 c.37.1.20 (B:109-385) 98.5 7E-06 5.1E-10 54.0 15.8 176 42-243 20-221 (277)
66 d2fnaa2 c.37.1.20 (A:1-283) Ar 98.5 3.4E-06 2.5E-10 56.1 13.6 170 376-600 12-223 (283)
67 d1gvnb_ c.37.1.21 (B:) Plasmid 98.3 2.2E-07 1.6E-11 64.3 3.2 58 386-447 13-70 (273)
68 d1ye8a1 c.37.1.11 (A:1-178) Hy 98.1 3.4E-06 2.5E-10 56.2 7.3 50 125-179 90-139 (178)
69 d2a5yb3 c.37.1.20 (B:109-385) 97.9 0.00047 3.4E-08 41.4 15.0 49 376-430 20-68 (277)
70 d1tf7a2 c.37.1.11 (A:256-497) 97.9 8.6E-05 6.2E-09 46.5 10.4 39 61-106 24-62 (242)
71 d1tuea_ c.37.1.20 (A:) Replica 97.7 3E-05 2.2E-09 49.7 5.4 116 407-583 54-172 (205)
72 d1ye8a1 c.37.1.11 (A:1-178) Hy 97.6 0.0002 1.5E-08 43.9 8.2 98 408-505 2-129 (178)
73 d1kaga_ c.37.1.2 (A:) Shikimat 97.5 7.1E-05 5.2E-09 47.1 4.8 25 63-87 2-26 (169)
74 d1rkba_ c.37.1.1 (A:) Adenylat 97.4 8.2E-05 6E-09 46.6 4.9 22 409-430 7-28 (173)
75 d1tuea_ c.37.1.20 (A:) Replica 97.4 0.00031 2.3E-08 42.6 7.8 117 51-203 40-173 (205)
76 d1p9ra_ c.37.1.11 (A:) Extrace 97.4 0.00078 5.7E-08 39.9 9.4 97 404-506 156-253 (401)
77 d1w36d1 c.37.1.19 (D:2-360) Ex 97.3 0.0019 1.4E-07 37.2 10.9 28 478-505 261-288 (359)
78 d1lw7a2 c.37.1.1 (A:220-411) T 97.2 0.00011 8.2E-09 45.7 3.8 22 409-430 10-31 (192)
79 d1xp8a1 c.37.1.11 (A:15-282) R 97.2 0.0038 2.8E-07 35.2 11.3 36 408-443 59-94 (268)
80 d1g6oa_ c.37.1.11 (A:) Hexamer 97.2 0.0012 8.6E-08 38.7 8.7 105 382-506 153-260 (323)
81 d2i3ba1 c.37.1.11 (A:1-189) Ca 97.2 0.0002 1.5E-08 43.9 4.7 24 408-431 3-26 (189)
82 d1viaa_ c.37.1.2 (A:) Shikimat 97.2 0.00014 1E-08 45.0 3.9 24 64-87 1-24 (161)
83 d1kaga_ c.37.1.2 (A:) Shikimat 97.2 0.00011 7.8E-09 45.8 3.3 29 408-439 4-32 (169)
84 d2qy9a2 c.37.1.10 (A:285-495) 97.2 0.0025 1.8E-07 36.4 10.1 120 407-533 10-144 (211)
85 d2iyva1 c.37.1.2 (A:2-166) Shi 97.2 0.00014 1E-08 45.1 3.6 24 64-87 2-25 (165)
86 d1e6ca_ c.37.1.2 (A:) Shikimat 97.2 0.00017 1.2E-08 44.5 4.0 24 64-87 3-26 (170)
87 d1rkba_ c.37.1.1 (A:) Adenylat 97.2 0.00014 1E-08 45.1 3.5 32 63-104 4-35 (173)
88 d1bifa1 c.37.1.7 (A:37-249) 6- 97.2 0.002 1.5E-07 37.1 9.4 24 66-89 5-28 (213)
89 d1y63a_ c.37.1.1 (A:) Probable 97.1 0.00015 1.1E-08 44.8 3.3 26 62-87 4-29 (174)
90 d1j8yf2 c.37.1.10 (F:87-297) G 97.1 0.0028 2E-07 36.1 9.6 44 402-445 8-51 (211)
91 d1lw7a2 c.37.1.1 (A:220-411) T 97.1 0.00016 1.2E-08 44.6 3.3 26 62-87 6-31 (192)
92 d1cr2a_ c.37.1.11 (A:) Gene 4 97.1 0.0057 4.2E-07 33.9 11.0 40 61-106 33-72 (277)
93 d1vmaa2 c.37.1.10 (A:82-294) G 97.0 0.0033 2.4E-07 35.5 9.6 40 406-445 11-50 (213)
94 d1qf9a_ c.37.1.1 (A:) UMP/CMP 97.0 0.00025 1.8E-08 43.3 3.7 22 409-430 9-30 (194)
95 d1okkd2 c.37.1.10 (D:97-303) G 97.0 0.0078 5.7E-07 33.0 11.3 122 408-533 8-141 (207)
96 d1zaka1 c.37.1.1 (A:3-127,A:15 97.0 0.00027 1.9E-08 43.1 3.7 22 409-430 6-27 (189)
97 d2iyva1 c.37.1.2 (A:2-166) Shi 97.0 0.00024 1.7E-08 43.5 3.4 30 409-441 4-33 (165)
98 d1ls1a2 c.37.1.10 (A:89-295) G 97.0 0.0043 3.1E-07 34.8 9.8 39 407-445 11-49 (207)
99 d1p9ra_ c.37.1.11 (A:) Extrace 97.0 0.0047 3.4E-07 34.5 10.0 116 39-172 135-255 (401)
100 d1ls1a2 c.37.1.10 (A:89-295) G 97.0 0.0056 4.1E-07 34.0 10.3 37 64-107 11-47 (207)
101 d1e6ca_ c.37.1.2 (A:) Shikimat 97.0 0.00026 1.9E-08 43.2 3.4 30 408-440 4-33 (170)
102 d1qf9a_ c.37.1.1 (A:) UMP/CMP 97.0 0.00031 2.3E-08 42.7 3.8 28 60-87 3-30 (194)
103 d1viaa_ c.37.1.2 (A:) Shikimat 97.0 0.00026 1.9E-08 43.2 3.4 31 408-441 2-32 (161)
104 d1u0ja_ c.37.1.20 (A:) Rep 40 97.0 0.0033 2.4E-07 35.6 9.1 93 407-528 105-200 (267)
105 d1zaka1 c.37.1.1 (A:3-127,A:15 96.9 0.00037 2.7E-08 42.1 4.1 26 62-87 2-27 (189)
106 d1ak2a1 c.37.1.1 (A:14-146,A:1 96.9 0.00057 4.2E-08 40.8 5.0 25 63-87 3-27 (190)
107 d1qhxa_ c.37.1.3 (A:) Chloramp 96.9 0.00048 3.5E-08 41.3 4.6 22 409-430 6-27 (178)
108 d1okkd2 c.37.1.10 (D:97-303) G 96.9 0.0032 2.3E-07 35.7 8.7 40 61-107 4-43 (207)
109 d1knqa_ c.37.1.17 (A:) Glucona 96.9 0.00037 2.7E-08 42.2 3.9 22 66-87 9-30 (171)
110 d1j8yf2 c.37.1.10 (F:87-297) G 96.9 0.0019 1.4E-07 37.3 7.5 37 63-106 12-48 (211)
111 d1zp6a1 c.37.1.25 (A:6-181) Hy 96.9 0.00019 1.4E-08 44.2 2.4 34 64-107 5-38 (176)
112 d1x6va3 c.37.1.4 (A:34-228) Ad 96.9 0.00024 1.7E-08 43.5 2.8 24 408-431 21-44 (195)
113 d2bdta1 c.37.1.25 (A:1-176) Hy 96.9 0.00044 3.2E-08 41.6 4.2 22 409-430 5-26 (176)
114 d1knqa_ c.37.1.17 (A:) Glucona 96.9 0.00063 4.6E-08 40.5 4.9 30 407-439 7-36 (171)
115 d1nlfa_ c.37.1.11 (A:) Hexamer 96.9 0.01 7.5E-07 32.2 12.1 27 63-89 29-55 (274)
116 d2qy9a2 c.37.1.10 (A:285-495) 96.9 0.011 7.8E-07 32.1 12.2 38 62-106 8-45 (211)
117 d2i3ba1 c.37.1.11 (A:1-189) Ca 96.8 0.00044 3.2E-08 41.6 3.6 27 64-90 2-28 (189)
118 d1w36d1 c.37.1.19 (D:2-360) Ex 96.8 0.0047 3.5E-07 34.5 8.9 23 408-430 165-187 (359)
119 d1m8pa3 c.37.1.15 (A:391-573) 96.8 0.00069 5E-08 40.3 4.6 23 408-430 8-30 (183)
120 d1m8pa3 c.37.1.15 (A:391-573) 96.8 0.00041 3E-08 41.8 3.3 27 64-90 7-33 (183)
121 d1zp6a1 c.37.1.25 (A:6-181) Hy 96.8 0.00035 2.5E-08 42.3 3.0 35 408-445 6-40 (176)
122 d1ukza_ c.37.1.1 (A:) Uridylat 96.8 0.00048 3.5E-08 41.4 3.5 34 408-446 10-43 (196)
123 d1qhxa_ c.37.1.3 (A:) Chloramp 96.7 0.0008 5.8E-08 39.8 4.3 33 63-105 3-35 (178)
124 d1u94a1 c.37.1.11 (A:6-268) Re 96.7 0.0058 4.2E-07 33.9 8.7 36 408-443 56-91 (263)
125 d1yj5a2 c.37.1.1 (A:351-522) 5 96.7 0.0012 8.6E-08 38.7 5.1 21 409-429 17-37 (172)
126 d2cdna1 c.37.1.1 (A:1-181) Ade 96.7 0.00075 5.5E-08 40.0 4.1 23 65-87 2-24 (181)
127 d1zina1 c.37.1.1 (A:1-125,A:16 96.7 0.00075 5.5E-08 40.0 4.1 22 66-87 3-24 (182)
128 d2ak3a1 c.37.1.1 (A:0-124,A:16 96.7 0.00098 7.1E-08 39.2 4.6 33 409-446 9-41 (189)
129 d2ak3a1 c.37.1.1 (A:0-124,A:16 96.7 0.00084 6.1E-08 39.7 4.2 27 61-87 4-30 (189)
130 d1x6va3 c.37.1.4 (A:34-228) Ad 96.7 0.00043 3.2E-08 41.6 2.8 26 65-90 21-46 (195)
131 d1tf7a1 c.37.1.11 (A:14-255) C 96.7 0.0049 3.6E-07 34.4 8.1 25 61-85 24-48 (242)
132 d1teva_ c.37.1.1 (A:) UMP/CMP 96.7 0.00061 4.5E-08 40.6 3.4 22 409-430 4-25 (194)
133 d1ak2a1 c.37.1.1 (A:14-146,A:1 96.7 0.00071 5.2E-08 40.2 3.7 33 409-446 6-38 (190)
134 d3adka_ c.37.1.1 (A:) Adenylat 96.6 0.00069 5.1E-08 40.3 3.5 33 409-446 11-43 (194)
135 d2p6ra3 c.37.1.19 (A:1-202) He 96.6 0.0099 7.2E-07 32.3 9.4 18 408-425 42-59 (202)
136 d2pmka1 c.37.1.12 (A:467-707) 96.6 0.0072 5.3E-07 33.2 8.6 27 61-87 27-53 (241)
137 d1y63a_ c.37.1.1 (A:) Probable 96.6 0.00084 6.1E-08 39.7 3.8 23 408-430 7-29 (174)
138 d1ukza_ c.37.1.1 (A:) Uridylat 96.6 0.00096 7E-08 39.3 4.0 27 61-87 6-32 (196)
139 d1v43a3 c.37.1.12 (A:7-245) Hy 96.6 0.0074 5.4E-07 33.2 8.5 27 61-87 30-56 (239)
140 d1yksa1 c.37.1.14 (A:185-324) 96.6 0.0013 9.8E-08 38.3 4.6 34 408-441 9-43 (140)
141 d1zcba2 c.37.1.8 (A:47-75,A:20 96.6 0.008 5.9E-07 32.9 8.6 147 66-216 5-157 (200)
142 d1akya1 c.37.1.1 (A:3-130,A:16 96.6 0.0014 1E-07 38.2 4.7 22 409-430 5-26 (180)
143 d1g6oa_ c.37.1.11 (A:) Hexamer 96.5 0.0082 6E-07 32.9 8.5 111 47-178 152-268 (323)
144 d1s3ga1 c.37.1.1 (A:1-125,A:16 96.5 0.0013 9.4E-08 38.4 4.3 22 66-87 3-24 (182)
145 d1zina1 c.37.1.1 (A:1-125,A:16 96.5 0.0011 8.3E-08 38.7 4.0 34 408-446 2-35 (182)
146 d2bdta1 c.37.1.25 (A:1-176) Hy 96.5 0.00077 5.6E-08 39.9 3.1 24 64-87 3-26 (176)
147 d2cdna1 c.37.1.1 (A:1-181) Ade 96.5 0.0012 8.5E-08 38.7 4.0 34 408-446 2-35 (181)
148 d1jj7a_ c.37.1.12 (A:) Peptide 96.5 0.011 7.7E-07 32.1 8.9 27 61-87 38-64 (251)
149 d3adka_ c.37.1.1 (A:) Adenylat 96.5 0.0013 9.3E-08 38.4 4.2 26 62-87 7-32 (194)
150 d3b60a1 c.37.1.12 (A:329-581) 96.5 0.007 5.1E-07 33.3 7.9 27 61-87 39-65 (253)
151 d1rz3a_ c.37.1.6 (A:) Hypothet 96.5 0.0036 2.7E-07 35.3 6.3 39 403-442 20-58 (198)
152 d1ckea_ c.37.1.1 (A:) CMP kina 96.4 0.002 1.5E-07 37.0 4.9 23 408-430 5-27 (225)
153 d1mo6a1 c.37.1.11 (A:1-269) Re 96.4 0.014 1E-06 31.3 9.1 37 408-444 62-98 (269)
154 d1teva_ c.37.1.1 (A:) UMP/CMP 96.4 0.0016 1.1E-07 37.8 4.2 24 64-87 2-25 (194)
155 d1e4va1 c.37.1.1 (A:1-121,A:15 96.4 0.0015 1.1E-07 37.9 3.9 22 409-430 3-24 (179)
156 d1s3ga1 c.37.1.1 (A:1-125,A:16 96.3 0.0017 1.2E-07 37.6 4.0 34 408-446 2-35 (182)
157 d1a1va1 c.37.1.14 (A:190-325) 96.3 0.0025 1.8E-07 36.4 4.9 94 407-503 9-119 (136)
158 d1ckea_ c.37.1.1 (A:) CMP kina 96.3 0.0013 9.3E-08 38.4 3.4 24 64-87 4-27 (225)
159 d1oxxk2 c.37.1.12 (K:1-242) Gl 96.3 0.0036 2.6E-07 35.4 5.7 27 61-87 29-55 (242)
160 d1np6a_ c.37.1.10 (A:) Molybdo 96.3 0.002 1.4E-07 37.1 4.2 34 407-440 3-36 (170)
161 d1ly1a_ c.37.1.1 (A:) Polynucl 96.3 0.0015 1.1E-07 38.0 3.3 21 409-429 5-25 (152)
162 d1q3ta_ c.37.1.1 (A:) CMP kina 96.3 0.0026 1.9E-07 36.3 4.6 33 409-446 6-38 (223)
163 d1g2912 c.37.1.12 (1:1-240) Ma 96.3 0.0036 2.6E-07 35.3 5.3 27 61-87 27-53 (240)
164 d1l2ta_ c.37.1.12 (A:) MJ0796 96.2 0.016 1.2E-06 30.8 8.7 27 61-87 29-55 (230)
165 d2awna2 c.37.1.12 (A:4-235) Ma 96.2 0.011 7.8E-07 32.0 7.7 27 61-87 24-50 (232)
166 d1akya1 c.37.1.1 (A:3-130,A:16 96.2 0.0018 1.3E-07 37.4 3.7 23 65-87 4-26 (180)
167 d1e4va1 c.37.1.1 (A:1-121,A:15 96.2 0.0021 1.6E-07 36.9 4.0 23 65-87 2-24 (179)
168 d1khta_ c.37.1.1 (A:) Adenylat 96.2 0.002 1.4E-07 37.1 3.8 24 66-89 4-27 (190)
169 d1bifa1 c.37.1.7 (A:37-249) 6- 96.2 0.0022 1.6E-07 36.8 4.0 36 408-443 4-39 (213)
170 d1r0wa_ c.37.1.12 (A:) Cystic 96.2 0.024 1.8E-06 29.6 9.3 23 408-430 64-86 (281)
171 d1jj7a_ c.37.1.12 (A:) Peptide 96.2 0.016 1.2E-06 30.9 8.3 23 408-430 42-64 (251)
172 d1np6a_ c.37.1.10 (A:) Molybdo 96.2 0.0032 2.3E-07 35.7 4.7 27 64-90 3-29 (170)
173 d1vmaa2 c.37.1.10 (A:82-294) G 96.2 0.0043 3.1E-07 34.8 5.3 38 62-106 10-47 (213)
174 d3d31a2 c.37.1.12 (A:1-229) Su 96.1 0.016 1.1E-06 31.0 8.1 28 60-87 23-50 (229)
175 d1v43a3 c.37.1.12 (A:7-245) Hy 96.1 0.012 8.5E-07 31.8 7.5 23 408-430 34-56 (239)
176 d1khta_ c.37.1.1 (A:) Adenylat 96.1 0.0027 2E-07 36.2 4.2 38 408-445 3-40 (190)
177 d1q3ta_ c.37.1.1 (A:) CMP kina 96.1 0.0033 2.4E-07 35.6 4.6 22 66-87 6-27 (223)
178 d2fh5b1 c.37.1.8 (B:63-269) Si 96.1 0.015 1.1E-06 31.0 8.0 24 64-87 1-24 (207)
179 d2awna2 c.37.1.12 (A:4-235) Ma 96.1 0.0068 5E-07 33.4 6.2 23 408-430 28-50 (232)
180 d1u0ja_ c.37.1.20 (A:) Rep 40 96.1 0.031 2.2E-06 28.9 12.6 117 51-203 90-229 (267)
181 d1a1va1 c.37.1.14 (A:190-325) 96.1 0.0082 6E-07 32.9 6.5 24 63-86 8-31 (136)
182 d1vpla_ c.37.1.12 (A:) Putativ 96.1 0.015 1.1E-06 31.0 7.9 27 61-87 26-52 (238)
183 d1m7ga_ c.37.1.4 (A:) Adenosin 96.0 0.0035 2.5E-07 35.4 4.4 39 408-446 26-65 (208)
184 d1ly1a_ c.37.1.1 (A:) Polynucl 96.0 0.0025 1.8E-07 36.4 3.6 23 65-87 4-26 (152)
185 d1sq5a_ c.37.1.6 (A:) Pantothe 96.0 0.014 1E-06 31.2 7.3 50 397-447 72-123 (308)
186 d2hyda1 c.37.1.12 (A:324-578) 96.0 0.007 5.1E-07 33.3 5.6 29 59-87 40-68 (255)
187 d1yj5a2 c.37.1.1 (A:351-522) 5 96.0 0.0021 1.6E-07 36.9 3.0 27 61-87 12-38 (172)
188 d1mv5a_ c.37.1.12 (A:) Multidr 96.0 0.028 2.1E-06 29.1 8.7 22 409-430 31-52 (242)
189 d1rz3a_ c.37.1.6 (A:) Hypothet 95.9 0.0073 5.3E-07 33.2 5.7 42 49-90 5-49 (198)
190 d1nksa_ c.37.1.1 (A:) Adenylat 95.9 0.0037 2.7E-07 35.3 4.1 24 66-89 4-27 (194)
191 d1lvga_ c.37.1.1 (A:) Guanylat 95.9 0.0032 2.3E-07 35.7 3.7 26 64-89 1-26 (190)
192 d2fz4a1 c.37.1.19 (A:24-229) D 95.9 0.02 1.4E-06 30.3 7.7 92 408-502 87-193 (206)
193 d1nksa_ c.37.1.1 (A:) Adenylat 95.9 0.0053 3.9E-07 34.2 4.7 37 408-444 3-39 (194)
194 d2qm8a1 c.37.1.10 (A:5-327) Me 95.8 0.029 2.1E-06 29.1 8.3 54 51-109 37-92 (323)
195 d1yksa1 c.37.1.14 (A:185-324) 95.8 0.0058 4.2E-07 33.9 4.8 28 62-89 6-34 (140)
196 d1gkya_ c.37.1.1 (A:) Guanylat 95.8 0.0035 2.5E-07 35.4 3.6 26 64-89 2-27 (186)
197 d1szpa2 c.37.1.11 (A:145-395) 95.8 0.022 1.6E-06 29.9 7.7 20 408-427 36-55 (251)
198 d1wb9a2 c.37.1.12 (A:567-800) 95.8 0.02 1.5E-06 30.2 7.3 112 63-182 41-166 (234)
199 d1odfa_ c.37.1.6 (A:) Hypothet 95.8 0.023 1.7E-06 29.8 7.6 61 384-447 8-71 (286)
200 d3dhwc1 c.37.1.12 (C:1-240) Me 95.8 0.0042 3.1E-07 34.8 3.8 27 61-87 29-55 (240)
201 d1wf3a1 c.37.1.8 (A:3-180) GTP 95.7 0.044 3.2E-06 27.8 9.3 22 65-86 7-28 (178)
202 d2pmka1 c.37.1.12 (A:467-707) 95.7 0.024 1.7E-06 29.7 7.5 23 408-430 31-53 (241)
203 d1r8sa_ c.37.1.8 (A:) ADP-ribo 95.7 0.036 2.7E-06 28.4 8.4 21 409-429 3-23 (160)
204 d1mv5a_ c.37.1.12 (A:) Multidr 95.6 0.0061 4.4E-07 33.8 4.1 27 61-87 26-52 (242)
205 d2p67a1 c.37.1.10 (A:1-327) LA 95.5 0.052 3.8E-06 27.4 10.4 38 52-89 41-80 (327)
206 d1gkub1 c.37.1.16 (B:1-250) He 95.5 0.014 1E-06 31.3 5.7 23 408-430 60-82 (237)
207 d1gm5a3 c.37.1.19 (A:286-549) 95.5 0.037 2.7E-06 28.4 7.8 57 380-445 87-143 (264)
208 d3d31a2 c.37.1.12 (A:1-229) Su 95.5 0.0097 7.1E-07 32.4 4.8 23 408-430 28-50 (229)
209 d1ksha_ c.37.1.8 (A:) ADP-ribo 95.5 0.0071 5.1E-07 33.3 4.1 21 408-428 4-24 (165)
210 d1u94a1 c.37.1.11 (A:6-268) Re 95.5 0.022 1.6E-06 30.0 6.5 38 62-106 53-90 (263)
211 d1m7ga_ c.37.1.4 (A:) Adenosin 95.4 0.0074 5.4E-07 33.2 4.0 51 54-110 15-65 (208)
212 d3dhwc1 c.37.1.12 (C:1-240) Me 95.4 0.028 2.1E-06 29.2 7.0 23 408-430 33-55 (240)
213 d1wp9a1 c.37.1.19 (A:1-200) pu 95.4 0.058 4.2E-06 27.0 11.1 22 64-85 24-45 (200)
214 d2onka1 c.37.1.12 (A:1-240) Mo 95.4 0.0096 7E-07 32.4 4.5 23 65-87 26-48 (240)
215 d1zd9a1 c.37.1.8 (A:18-181) AD 95.3 0.056 4.1E-06 27.1 8.2 20 409-428 5-24 (164)
216 d1g2912 c.37.1.12 (1:1-240) Ma 95.2 0.021 1.5E-06 30.1 5.9 23 408-430 31-53 (240)
217 d2fz4a1 c.37.1.19 (A:24-229) D 95.2 0.065 4.7E-06 26.7 11.1 42 43-87 68-109 (206)
218 d2eyqa3 c.37.1.19 (A:546-778) 95.2 0.065 4.7E-06 26.7 10.6 130 381-533 60-218 (233)
219 d1tf7a2 c.37.1.11 (A:256-497) 95.1 0.017 1.2E-06 30.7 5.1 36 408-443 28-63 (242)
220 d1pjra1 c.37.1.19 (A:1-318) DE 95.0 0.021 1.5E-06 30.0 5.4 41 62-106 23-64 (318)
221 d1uj2a_ c.37.1.6 (A:) Uridine- 95.0 0.008 5.8E-07 33.0 3.2 22 409-430 5-26 (213)
222 d1kaoa_ c.37.1.8 (A:) Rap2a {H 94.9 0.078 5.7E-06 26.1 10.1 20 66-85 6-25 (167)
223 d2hyda1 c.37.1.12 (A:324-578) 94.9 0.049 3.6E-06 27.5 7.0 23 408-430 46-68 (255)
224 d2gj8a1 c.37.1.8 (A:216-376) P 94.9 0.078 5.7E-06 26.1 7.9 22 65-86 3-24 (161)
225 d2bmfa2 c.37.1.14 (A:178-482) 94.9 0.031 2.3E-06 28.9 5.9 25 62-86 8-33 (305)
226 d2p6ra3 c.37.1.19 (A:1-202) He 94.8 0.068 5E-06 26.5 7.6 51 32-88 14-66 (202)
227 d1gm5a3 c.37.1.19 (A:286-549) 94.8 0.083 6E-06 25.9 10.0 15 478-492 205-219 (264)
228 d1znwa1 c.37.1.1 (A:20-201) Gu 94.8 0.01 7.4E-07 32.2 3.3 25 64-88 3-27 (182)
229 d1zj6a1 c.37.1.8 (A:2-178) ADP 94.7 0.024 1.8E-06 29.6 5.1 23 407-429 16-38 (177)
230 d1uj2a_ c.37.1.6 (A:) Uridine- 94.7 0.012 8.9E-07 31.7 3.5 26 66-91 5-30 (213)
231 d1mo6a1 c.37.1.11 (A:1-269) Re 94.7 0.051 3.7E-06 27.4 6.7 40 61-107 58-97 (269)
232 d1nrjb_ c.37.1.8 (B:) Signal r 94.6 0.026 1.9E-06 29.4 5.0 24 63-86 3-26 (209)
233 d1lvga_ c.37.1.1 (A:) Guanylat 94.6 0.012 8.7E-07 31.7 3.2 22 409-430 3-24 (190)
234 d1u8za_ c.37.1.8 (A:) Ras-rela 94.4 0.088 6.4E-06 25.8 7.3 20 66-85 7-26 (168)
235 d1nn5a_ c.37.1.1 (A:) Thymidyl 94.4 0.028 2E-06 29.2 4.6 24 66-89 6-29 (209)
236 d1xp8a1 c.37.1.11 (A:15-282) R 94.3 0.053 3.9E-06 27.3 6.0 47 54-107 45-94 (268)
237 d1gkya_ c.37.1.1 (A:) Guanylat 94.3 0.016 1.1E-06 31.0 3.3 22 409-430 4-25 (186)
238 d1kgda_ c.37.1.1 (A:) Guanylat 94.3 0.019 1.3E-06 30.4 3.7 23 65-87 5-27 (178)
239 d1yrba1 c.37.1.10 (A:1-244) AT 94.3 0.033 2.4E-06 28.7 4.8 24 66-89 3-26 (244)
240 d2gjsa1 c.37.1.8 (A:91-258) Ra 94.2 0.042 3E-06 28.0 5.3 20 66-85 4-23 (168)
241 d2eyqa3 c.37.1.19 (A:546-778) 94.2 0.11 8.2E-06 25.0 17.5 62 40-108 53-114 (233)
242 d1pzna2 c.37.1.11 (A:96-349) D 94.1 0.019 1.4E-06 30.4 3.4 21 409-429 39-59 (254)
243 d2atva1 c.37.1.8 (A:5-172) Ras 94.1 0.063 4.6E-06 26.8 6.1 21 66-86 5-25 (168)
244 d1s96a_ c.37.1.1 (A:) Guanylat 94.1 0.019 1.4E-06 30.3 3.3 25 64-88 3-27 (205)
245 d1ihua2 c.37.1.10 (A:308-586) 94.0 0.065 4.7E-06 26.7 6.0 50 51-107 8-57 (279)
246 d1v5wa_ c.37.1.11 (A:) Meiotic 94.0 0.018 1.3E-06 30.6 3.0 23 65-87 39-61 (258)
247 d1ji0a_ c.37.1.12 (A:) Branche 94.0 0.063 4.6E-06 26.7 5.9 27 61-87 30-56 (240)
248 d1sq5a_ c.37.1.6 (A:) Pantothe 94.0 0.048 3.5E-06 27.6 5.2 40 66-110 83-122 (308)
249 d1n0wa_ c.37.1.11 (A:) DNA rep 93.9 0.019 1.4E-06 30.4 3.0 25 63-87 23-47 (242)
250 d2mysa2 c.37.1.9 (A:4-33,A:80- 93.9 0.085 6.2E-06 25.9 6.3 72 18-89 76-149 (794)
251 d2erya1 c.37.1.8 (A:10-180) r- 93.8 0.069 5E-06 26.5 5.7 20 66-85 8-27 (171)
252 d1ihua1 c.37.1.10 (A:1-296) Ar 93.7 0.059 4.3E-06 27.0 5.3 29 61-89 6-34 (296)
253 d1d0xa2 c.37.1.9 (A:2-33,A:80- 93.7 0.053 3.9E-06 27.3 5.1 70 20-89 80-151 (712)
254 d1lkxa_ c.37.1.9 (A:) Myosin S 93.7 0.052 3.8E-06 27.4 5.0 71 18-88 39-111 (684)
255 d1nn5a_ c.37.1.1 (A:) Thymidyl 93.7 0.046 3.4E-06 27.7 4.7 33 409-441 6-38 (209)
256 d1xjca_ c.37.1.10 (A:) Molybdo 93.7 0.036 2.7E-06 28.4 4.2 33 408-440 3-35 (165)
257 d1znwa1 c.37.1.1 (A:20-201) Gu 93.6 0.025 1.8E-06 29.5 3.3 23 408-430 4-26 (182)
258 d1htwa_ c.37.1.18 (A:) Hypothe 93.6 0.029 2.1E-06 29.1 3.6 22 409-430 36-57 (158)
259 d1svia_ c.37.1.8 (A:) Probable 93.6 0.12 8.4E-06 25.0 6.6 22 406-427 23-44 (195)
260 d1ctqa_ c.37.1.8 (A:) cH-p21 R 93.6 0.042 3E-06 28.0 4.3 20 66-85 6-25 (166)
261 d1xjca_ c.37.1.10 (A:) Molybdo 93.6 0.029 2.1E-06 29.1 3.5 25 66-90 4-28 (165)
262 d1odfa_ c.37.1.6 (A:) Hypothet 93.5 0.071 5.2E-06 26.4 5.4 50 57-110 19-70 (286)
263 d1uaaa1 c.37.1.19 (A:2-307) DE 93.4 0.036 2.6E-06 28.4 3.8 28 477-504 205-232 (306)
264 d1fzqa_ c.37.1.8 (A:) ADP-ribo 93.3 0.022 1.6E-06 29.9 2.6 20 408-427 18-37 (176)
265 d1br2a2 c.37.1.9 (A:80-789) My 93.3 0.077 5.6E-06 26.2 5.4 72 18-89 44-117 (710)
266 d1a7ja_ c.37.1.6 (A:) Phosphor 93.2 0.019 1.4E-06 30.3 2.2 39 65-110 6-44 (288)
267 d2fn4a1 c.37.1.8 (A:24-196) r- 93.2 0.17 1.2E-05 23.9 9.4 20 409-428 9-28 (173)
268 d1mkya1 c.37.1.8 (A:2-172) Pro 93.2 0.17 1.2E-05 23.8 7.4 19 66-84 3-21 (171)
269 d2p67a1 c.37.1.10 (A:1-327) LA 93.1 0.16 1.1E-05 24.0 6.7 38 407-444 55-94 (327)
270 d1w7ja2 c.37.1.9 (A:63-792) My 93.1 0.076 5.5E-06 26.2 5.1 71 19-89 48-120 (730)
271 d1z06a1 c.37.1.8 (A:32-196) Ra 93.1 0.17 1.3E-05 23.7 7.9 20 66-85 5-24 (165)
272 d2fn4a1 c.37.1.8 (A:24-196) r- 93.1 0.062 4.5E-06 26.8 4.6 22 65-86 8-29 (173)
273 d1qzma_ c.37.1.20 (A:) ATPase 93.0 0.18 1.3E-05 23.7 8.9 67 584-651 2-69 (94)
274 d1uaaa1 c.37.1.19 (A:2-307) DE 93.0 0.04 2.9E-06 28.1 3.5 27 62-88 13-40 (306)
275 d1gsia_ c.37.1.1 (A:) Thymidyl 93.0 0.069 5E-06 26.5 4.7 24 66-89 3-26 (208)
276 d1e9ra_ c.37.1.11 (A:) Bacteri 92.9 0.04 2.9E-06 28.2 3.4 36 63-105 50-85 (433)
277 d1kk8a2 c.37.1.9 (A:1-28,A:77- 92.9 0.08 5.8E-06 26.1 4.9 70 20-89 76-147 (789)
278 d1ihua1 c.37.1.10 (A:1-296) Ar 92.8 0.12 8.7E-06 24.9 5.7 51 404-458 7-57 (296)
279 d1v5wa_ c.37.1.11 (A:) Meiotic 92.8 0.041 3E-06 28.0 3.3 23 408-430 39-61 (258)
280 d4tmka_ c.37.1.1 (A:) Thymidyl 92.8 0.04 2.9E-06 28.1 3.3 26 64-89 3-28 (210)
281 d1szpa2 c.37.1.11 (A:145-395) 92.7 0.031 2.3E-06 28.9 2.7 46 61-107 32-77 (251)
282 d1pzna2 c.37.1.11 (A:96-349) D 92.7 0.046 3.4E-06 27.7 3.5 28 61-88 34-61 (254)
283 d1u0la2 c.37.1.8 (A:69-293) Pr 92.7 0.063 4.6E-06 26.8 4.1 21 408-428 97-117 (225)
284 d1pjra1 c.37.1.19 (A:1-318) DE 92.7 0.051 3.7E-06 27.4 3.7 26 479-504 217-242 (318)
285 d1uf9a_ c.37.1.1 (A:) Dephosph 92.6 0.052 3.8E-06 27.3 3.6 19 409-427 6-24 (191)
286 d1gsia_ c.37.1.1 (A:) Thymidyl 92.6 0.063 4.6E-06 26.8 4.0 33 409-441 3-35 (208)
287 d4tmka_ c.37.1.1 (A:) Thymidyl 92.5 0.069 5E-06 26.5 4.2 27 409-435 5-31 (210)
288 d1rifa_ c.37.1.23 (A:) DNA hel 92.5 0.2 1.5E-05 23.3 6.5 23 408-430 130-152 (282)
289 d2onka1 c.37.1.12 (A:1-240) Mo 92.5 0.041 3E-06 28.0 3.0 36 408-444 26-61 (240)
290 d1s96a_ c.37.1.1 (A:) Guanylat 92.4 0.049 3.6E-06 27.5 3.3 23 408-430 4-26 (205)
291 d2bmfa2 c.37.1.14 (A:178-482) 92.4 0.13 9.4E-06 24.6 5.4 23 408-430 11-35 (305)
292 d1kgda_ c.37.1.1 (A:) Guanylat 92.4 0.056 4.1E-06 27.1 3.5 23 408-430 5-27 (178)
293 d2a5ja1 c.37.1.8 (A:9-181) Rab 92.3 0.048 3.5E-06 27.6 3.1 20 409-428 6-25 (173)
294 d1ewqa2 c.37.1.12 (A:542-765) 92.3 0.22 1.6E-05 23.0 10.6 110 65-182 37-159 (224)
295 d2vp4a1 c.37.1.1 (A:12-208) De 92.3 0.023 1.7E-06 29.7 1.5 27 403-430 7-33 (197)
296 d1n0wa_ c.37.1.11 (A:) DNA rep 92.2 0.052 3.8E-06 27.3 3.2 23 408-430 25-47 (242)
297 d1e9ra_ c.37.1.11 (A:) Bacteri 92.2 0.095 6.9E-06 25.5 4.5 29 112-141 57-85 (433)
298 d2i1qa2 c.37.1.11 (A:65-322) D 92.1 0.046 3.3E-06 27.7 2.8 24 64-87 35-58 (258)
299 d2qtvb1 c.37.1.8 (B:24-189) SA 92.0 0.055 4E-06 27.2 3.1 21 409-429 3-23 (166)
300 d1rifa_ c.37.1.23 (A:) DNA hel 92.0 0.16 1.2E-05 24.0 5.5 38 479-529 226-263 (282)
301 d1upta_ c.37.1.8 (A:) ADP-ribo 91.9 0.056 4E-06 27.1 3.1 22 408-429 7-28 (169)
302 d1vpla_ c.37.1.12 (A:) Putativ 91.9 0.24 1.8E-05 22.7 9.2 23 408-430 30-52 (238)
303 d3b60a1 c.37.1.12 (A:329-581) 91.9 0.033 2.4E-06 28.7 1.9 23 408-430 43-65 (253)
304 d1l2ta_ c.37.1.12 (A:) MJ0796 91.8 0.048 3.5E-06 27.6 2.7 23 408-430 33-55 (230)
305 d1tmka_ c.37.1.1 (A:) Thymidyl 91.8 0.1 7.5E-06 25.3 4.3 24 64-87 4-27 (214)
306 d1r0wa_ c.37.1.12 (A:) Cystic 91.7 0.044 3.2E-06 27.8 2.4 27 61-87 60-86 (281)
307 d1z2aa1 c.37.1.8 (A:8-171) Rab 91.7 0.061 4.4E-06 26.9 3.1 20 66-85 5-24 (164)
308 d1yrba1 c.37.1.10 (A:1-244) AT 91.7 0.14 1E-05 24.4 5.0 33 408-441 2-34 (244)
309 d2i1qa2 c.37.1.11 (A:65-322) D 91.7 0.077 5.6E-06 26.2 3.6 24 408-431 36-59 (258)
310 d2ocpa1 c.37.1.1 (A:37-277) De 91.6 0.075 5.5E-06 26.2 3.5 24 64-87 3-26 (241)
311 d2qtvb1 c.37.1.8 (B:24-189) SA 91.6 0.17 1.2E-05 23.8 5.3 22 66-87 3-24 (166)
312 d1z2aa1 c.37.1.8 (A:8-171) Rab 91.6 0.066 4.8E-06 26.6 3.2 21 409-429 5-25 (164)
313 d1r8sa_ c.37.1.8 (A:) ADP-ribo 91.5 0.26 1.9E-05 22.6 6.2 23 66-88 3-25 (160)
314 d1wb9a2 c.37.1.12 (A:567-800) 91.5 0.27 1.9E-05 22.5 8.6 108 408-529 43-164 (234)
315 d1azta2 c.37.1.8 (A:35-65,A:20 91.5 0.26 1.9E-05 22.6 6.1 20 65-84 8-27 (221)
316 d2f7sa1 c.37.1.8 (A:5-190) Rab 91.4 0.066 4.8E-06 26.6 3.0 19 409-427 8-26 (186)
317 d1sgwa_ c.37.1.12 (A:) Putativ 91.4 0.065 4.8E-06 26.7 3.0 26 62-87 26-51 (200)
318 d3raba_ c.37.1.8 (A:) Rab3a {R 91.4 0.069 5E-06 26.5 3.1 20 66-85 8-27 (169)
319 d2bcjq2 c.37.1.8 (Q:38-66,Q:18 91.3 0.28 2E-05 22.3 8.9 21 66-86 5-25 (200)
320 d1z0fa1 c.37.1.8 (A:8-173) Rab 91.3 0.072 5.3E-06 26.4 3.1 20 66-85 7-26 (166)
321 d2f9la1 c.37.1.8 (A:8-182) Rab 91.3 0.073 5.3E-06 26.3 3.1 20 409-428 7-26 (175)
322 d1f6ba_ c.37.1.8 (A:) SAR1 {Ch 91.2 0.043 3.1E-06 27.9 1.9 21 408-428 15-35 (186)
323 d1upta_ c.37.1.8 (A:) ADP-ribo 91.2 0.29 2.1E-05 22.2 6.8 23 65-87 7-29 (169)
324 d1cr2a_ c.37.1.11 (A:) Gene 4 91.0 0.2 1.4E-05 23.3 5.1 35 408-442 37-72 (277)
325 d2ew1a1 c.37.1.8 (A:4-174) Rab 90.9 0.069 5E-06 26.5 2.7 20 66-85 8-27 (171)
326 d1z08a1 c.37.1.8 (A:17-183) Ra 90.9 0.083 6.1E-06 25.9 3.1 19 66-84 6-24 (167)
327 d1r2qa_ c.37.1.8 (A:) Rab5a {H 90.9 0.083 6.1E-06 25.9 3.1 20 66-85 9-28 (170)
328 d1uf9a_ c.37.1.1 (A:) Dephosph 90.8 0.1 7.5E-06 25.3 3.6 21 66-87 6-26 (191)
329 d1vg8a_ c.37.1.8 (A:) Rab7 {Ra 90.8 0.086 6.3E-06 25.8 3.2 20 66-85 5-24 (184)
330 d1b0ua_ c.37.1.12 (A:) ATP-bin 90.8 0.059 4.3E-06 27.0 2.3 27 61-87 26-52 (258)
331 d1ky3a_ c.37.1.8 (A:) Rab-rela 90.8 0.088 6.4E-06 25.7 3.2 19 66-84 5-23 (175)
332 d1kkma_ c.91.1.2 (A:) HPr kina 90.7 0.067 4.9E-06 26.6 2.5 34 408-445 16-49 (176)
333 d1tmka_ c.37.1.1 (A:) Thymidyl 90.5 0.12 9.1E-06 24.7 3.8 26 405-431 3-28 (214)
334 d2bv3a2 c.37.1.8 (A:7-282) Elo 90.5 0.15 1.1E-05 24.3 4.1 27 62-88 5-31 (276)
335 d1oywa2 c.37.1.19 (A:1-206) Re 90.5 0.33 2.4E-05 21.8 11.0 19 64-82 41-59 (206)
336 d2erxa1 c.37.1.8 (A:6-176) di- 90.3 0.093 6.8E-06 25.6 3.0 20 66-85 5-24 (171)
337 d2ocpa1 c.37.1.1 (A:37-277) De 90.3 0.067 4.8E-06 26.6 2.2 25 405-430 2-26 (241)
338 d1a7ja_ c.37.1.6 (A:) Phosphor 90.3 0.08 5.8E-06 26.0 2.6 39 408-446 6-44 (288)
339 d1wb1a4 c.37.1.8 (A:1-179) Elo 90.3 0.23 1.7E-05 22.9 5.0 20 408-427 7-26 (179)
340 d1wmsa_ c.37.1.8 (A:) Rab9a {H 90.3 0.1 7.6E-06 25.3 3.2 20 409-428 9-28 (174)
341 d1htwa_ c.37.1.18 (A:) Hypothe 90.2 0.17 1.3E-05 23.7 4.3 45 45-89 8-59 (158)
342 d1h65a_ c.37.1.8 (A:) Chloropl 90.2 0.13 9.3E-06 24.6 3.6 22 407-428 33-54 (257)
343 d1vhta_ c.37.1.1 (A:) Dephosph 90.1 0.11 8.2E-06 25.0 3.2 22 408-429 5-26 (208)
344 d1z0ja1 c.37.1.8 (A:2-168) Rab 90.1 0.11 8E-06 25.1 3.2 20 409-428 7-26 (167)
345 d1g16a_ c.37.1.8 (A:) Rab-rela 90.0 0.092 6.7E-06 25.6 2.7 20 409-428 5-24 (166)
346 d1b0ua_ c.37.1.12 (A:) ATP-bin 90.0 0.09 6.5E-06 25.7 2.7 23 408-430 30-52 (258)
347 d2vp4a1 c.37.1.1 (A:12-208) De 90.0 0.04 2.9E-06 28.1 0.9 27 62-88 8-34 (197)
348 d2g6ba1 c.37.1.8 (A:58-227) Ra 90.0 0.11 8E-06 25.1 3.1 20 66-85 9-28 (170)
349 d1f6ba_ c.37.1.8 (A:) SAR1 {Ch 90.0 0.12 9E-06 24.8 3.3 33 55-87 4-37 (186)
350 d1jjva_ c.37.1.1 (A:) Dephosph 89.9 0.099 7.2E-06 25.4 2.9 20 409-428 5-24 (205)
351 d1mh1a_ c.37.1.8 (A:) Rac {Hum 89.9 0.11 8.1E-06 25.1 3.1 20 66-85 8-27 (183)
352 d1nlfa_ c.37.1.11 (A:) Hexamer 89.9 0.15 1.1E-05 24.2 3.7 23 408-430 31-53 (274)
353 d1c1ya_ c.37.1.8 (A:) Rap1A {H 89.9 0.11 8.2E-06 25.0 3.1 20 66-85 6-25 (167)
354 d2cxxa1 c.37.1.8 (A:2-185) GTP 89.9 0.081 5.9E-06 26.0 2.4 22 65-86 2-23 (184)
355 d1oxxk2 c.37.1.12 (K:1-242) Gl 89.9 0.062 4.5E-06 26.8 1.7 23 408-430 33-55 (242)
356 d1svia_ c.37.1.8 (A:) Probable 89.8 0.14 1.1E-05 24.3 3.6 23 63-85 23-45 (195)
357 d1gkub1 c.37.1.16 (B:1-250) He 89.8 0.38 2.7E-05 21.4 7.0 49 48-106 46-94 (237)
358 d1x3sa1 c.37.1.8 (A:2-178) Rab 89.7 0.12 8.6E-06 24.9 3.1 20 409-428 10-29 (177)
359 d1xtqa1 c.37.1.8 (A:3-169) GTP 89.7 0.1 7.3E-06 25.4 2.7 21 409-429 7-27 (167)
360 d2atva1 c.37.1.8 (A:5-172) Ras 89.7 0.11 8.3E-06 25.0 3.0 22 409-430 5-26 (168)
361 d1tf7a1 c.37.1.11 (A:14-255) C 89.7 0.12 9E-06 24.7 3.2 22 408-429 28-49 (242)
362 d2bcgy1 c.37.1.8 (Y:3-196) GTP 89.6 0.1 7.5E-06 25.3 2.7 20 409-428 9-28 (194)
363 d1kmqa_ c.37.1.8 (A:) RhoA {Hu 89.6 0.1 7.6E-06 25.3 2.7 20 409-428 5-24 (177)
364 d2bmea1 c.37.1.8 (A:6-179) Rab 89.6 0.11 7.7E-06 25.2 2.7 19 409-427 8-26 (174)
365 d1ctqa_ c.37.1.8 (A:) cH-p21 R 89.5 0.13 9.3E-06 24.7 3.1 22 409-430 6-27 (166)
366 d1kkma_ c.91.1.2 (A:) HPr kina 89.4 0.14 1.1E-05 24.3 3.4 25 62-86 13-37 (176)
367 d1deka_ c.37.1.1 (A:) Deoxynuc 89.4 0.19 1.4E-05 23.4 4.0 22 66-87 4-25 (241)
368 d1vhta_ c.37.1.1 (A:) Dephosph 89.4 0.14 1E-05 24.4 3.3 21 66-87 6-26 (208)
369 d1ek0a_ c.37.1.8 (A:) Ypt51 {B 89.4 0.13 9.6E-06 24.6 3.1 19 409-427 6-24 (170)
370 d1m7ba_ c.37.1.8 (A:) RhoE (RN 89.3 0.11 8.1E-06 25.1 2.7 20 66-85 5-24 (179)
371 d1yzqa1 c.37.1.8 (A:14-177) Ra 89.3 0.11 8.2E-06 25.0 2.7 20 66-85 3-22 (164)
372 d1h65a_ c.37.1.8 (A:) Chloropl 89.3 0.1 7.4E-06 25.4 2.5 37 50-86 17-55 (257)
373 d2g3ya1 c.37.1.8 (A:73-244) GT 89.3 0.13 9.2E-06 24.7 3.0 20 66-85 6-25 (172)
374 d1sgwa_ c.37.1.12 (A:) Putativ 89.3 0.1 7.3E-06 25.4 2.4 23 408-430 29-51 (200)
375 d1x1ra1 c.37.1.8 (A:10-178) Ra 89.2 0.14 1E-05 24.4 3.2 20 66-85 7-26 (169)
376 d2atxa1 c.37.1.8 (A:9-193) Rho 89.1 0.12 8.9E-06 24.8 2.8 25 405-429 8-32 (185)
377 g1f2t.1 c.37.1.12 (A:,B:) Rad5 89.1 0.16 1.2E-05 24.0 3.3 28 477-504 224-252 (292)
378 d2ngra_ c.37.1.8 (A:) CDC42 {H 88.9 0.12 9.1E-06 24.7 2.7 19 409-427 6-24 (191)
379 d1knxa2 c.91.1.2 (A:133-309) H 88.9 0.075 5.4E-06 26.3 1.6 34 408-445 17-50 (177)
380 d1ko7a2 c.91.1.2 (A:130-298) H 88.9 0.097 7E-06 25.5 2.1 22 408-429 17-38 (169)
381 d2dy1a2 c.37.1.8 (A:8-274) Elo 88.9 0.44 3.2E-05 21.0 8.3 25 64-88 3-27 (267)
382 d1deka_ c.37.1.1 (A:) Deoxynuc 88.8 0.16 1.2E-05 24.0 3.2 33 408-445 3-35 (241)
383 d1e0sa_ c.37.1.8 (A:) ADP-ribo 88.7 0.1 7.3E-06 25.4 2.1 21 408-428 14-34 (173)
384 d1cp2a_ c.37.1.10 (A:) Nitroge 88.6 0.31 2.3E-05 22.0 4.6 38 65-109 3-40 (269)
385 d1knxa2 c.91.1.2 (A:133-309) H 88.6 0.14 1E-05 24.3 2.9 24 62-85 14-37 (177)
386 d1ji0a_ c.37.1.12 (A:) Branche 88.3 0.093 6.8E-06 25.6 1.7 23 408-430 34-56 (240)
387 d1ihua2 c.37.1.10 (A:308-586) 88.3 0.36 2.6E-05 21.6 4.7 38 407-444 21-58 (279)
388 d2qm8a1 c.37.1.10 (A:5-327) Me 88.2 0.48 3.5E-05 20.7 7.4 39 407-445 52-92 (323)
389 d1jjva_ c.37.1.1 (A:) Dephosph 88.1 0.13 9.5E-06 24.6 2.4 20 66-85 5-24 (205)
390 d2afhe1 c.37.1.10 (E:1-289) Ni 88.1 0.31 2.3E-05 22.0 4.3 38 65-109 4-41 (289)
391 g1qhh.1 c.37.1.19 (A:,B:,C:,D: 88.0 0.42 3.1E-05 21.1 5.0 40 62-105 23-63 (623)
392 d2fh5b1 c.37.1.8 (B:63-269) Si 88.0 0.21 1.5E-05 23.2 3.4 23 408-430 2-24 (207)
393 d2a5ja1 c.37.1.8 (A:9-181) Rab 88.0 0.19 1.4E-05 23.5 3.1 21 66-86 6-26 (173)
394 d1udxa2 c.37.1.8 (A:157-336) O 87.8 0.13 9.8E-06 24.5 2.3 18 409-426 4-21 (180)
395 d1p5zb_ c.37.1.1 (B:) Deoxycyt 87.8 0.052 3.8E-06 27.3 0.2 23 65-87 4-26 (241)
396 d1nrjb_ c.37.1.8 (B:) Signal r 87.8 0.22 1.6E-05 23.1 3.4 22 408-429 5-26 (209)
397 d2bv3a2 c.37.1.8 (A:7-282) Elo 87.8 0.51 3.7E-05 20.5 10.8 94 407-504 7-122 (276)
398 d1byia_ c.37.1.10 (A:) Dethiob 87.8 0.31 2.3E-05 22.0 4.1 24 66-89 4-28 (224)
399 d1ko7a2 c.91.1.2 (A:130-298) H 87.7 0.22 1.6E-05 23.1 3.3 25 62-86 14-38 (169)
400 d1e0sa_ c.37.1.8 (A:) ADP-ribo 87.6 0.18 1.3E-05 23.5 2.9 27 59-85 8-34 (173)
401 d1egaa1 c.37.1.8 (A:4-182) GTP 87.5 0.17 1.3E-05 23.8 2.7 22 407-428 6-27 (179)
402 d1zj6a1 c.37.1.8 (A:2-178) ADP 87.5 0.53 3.9E-05 20.4 6.9 33 53-86 6-38 (177)
403 d2fu5c1 c.37.1.8 (C:3-175) Rab 87.4 0.1 7.3E-06 25.4 1.5 20 409-428 9-28 (173)
404 d1q0ua_ c.37.1.19 (A:) Probabl 87.4 0.53 3.9E-05 20.4 9.2 15 408-422 40-54 (209)
405 d2f7sa1 c.37.1.8 (A:5-190) Rab 87.3 0.2 1.5E-05 23.3 3.0 20 66-85 8-27 (186)
406 d1moza_ c.37.1.8 (A:) ADP-ribo 87.2 0.1 7.4E-06 25.3 1.4 21 407-427 18-38 (182)
407 d1p6xa_ c.37.1.1 (A:) Thymidin 87.2 0.26 1.9E-05 22.5 3.5 24 66-89 9-32 (333)
408 d1veca_ c.37.1.19 (A:) DEAD bo 87.2 0.55 4E-05 20.3 10.1 14 408-421 42-55 (206)
409 d1p5zb_ c.37.1.1 (B:) Deoxycyt 87.1 0.075 5.5E-06 26.2 0.7 23 408-430 4-26 (241)
410 d1lnza2 c.37.1.8 (A:158-342) O 87.0 0.16 1.2E-05 23.9 2.4 18 409-426 4-21 (185)
411 d1fzqa_ c.37.1.8 (A:) ADP-ribo 86.9 0.29 2.1E-05 22.2 3.6 21 65-85 18-38 (176)
412 d1nija1 c.37.1.10 (A:2-223) Hy 86.9 0.28 2E-05 22.3 3.5 25 405-429 2-26 (222)
413 d1t9ha2 c.37.1.8 (A:68-298) Pr 86.9 0.061 4.5E-06 26.8 0.1 22 408-429 99-120 (231)
414 d1ksha_ c.37.1.8 (A:) ADP-ribo 86.8 0.2 1.5E-05 23.2 2.8 106 65-181 4-114 (165)
415 d1g6ha_ c.37.1.12 (A:) MJ1267 86.8 0.13 9.7E-06 24.5 1.8 27 61-87 28-54 (254)
416 g1xew.1 c.37.1.12 (X:,Y:) Smc 86.8 0.25 1.8E-05 22.6 3.2 43 474-527 242-285 (329)
417 d1s2ma1 c.37.1.19 (A:46-251) P 86.6 0.59 4.3E-05 20.1 10.1 15 408-422 40-54 (206)
418 d2g9na1 c.37.1.19 (A:21-238) I 86.6 0.59 4.3E-05 20.1 10.8 16 408-423 51-66 (218)
419 d1mkya2 c.37.1.8 (A:173-358) P 86.6 0.23 1.7E-05 22.9 2.9 20 408-427 10-29 (186)
420 d1x1ra1 c.37.1.8 (A:10-178) Ra 86.6 0.59 4.3E-05 20.1 6.5 26 405-430 3-28 (169)
421 d1osna_ c.37.1.1 (A:) Thymidin 86.5 0.26 1.9E-05 22.5 3.1 24 66-89 8-31 (331)
422 d3raba_ c.37.1.8 (A:) Rab3a {R 86.4 0.26 1.9E-05 22.5 3.1 22 409-430 8-29 (169)
423 d1zd9a1 c.37.1.8 (A:18-181) AD 86.3 0.26 1.9E-05 22.5 3.1 23 65-87 4-26 (164)
424 d1i2ma_ c.37.1.8 (A:) Ran {Hum 86.2 0.095 6.9E-06 25.5 0.8 20 409-428 6-25 (170)
425 d1z0fa1 c.37.1.8 (A:8-173) Rab 86.1 0.28 2E-05 22.3 3.1 22 409-430 7-28 (166)
426 d1g6ha_ c.37.1.12 (A:) MJ1267 86.1 0.23 1.6E-05 22.9 2.7 23 408-430 32-54 (254)
427 d2bmja1 c.37.1.8 (A:66-240) Ce 86.0 0.29 2.1E-05 22.2 3.2 23 407-429 6-28 (175)
428 d1kaoa_ c.37.1.8 (A:) Rap2a {H 85.9 0.29 2.1E-05 22.2 3.1 22 409-430 6-27 (167)
429 d1z08a1 c.37.1.8 (A:17-183) Ra 85.8 0.29 2.1E-05 22.2 3.1 22 409-430 6-27 (167)
430 d1r2qa_ c.37.1.8 (A:) Rab5a {H 85.7 0.3 2.2E-05 22.1 3.1 22 409-430 9-30 (170)
431 d2f9la1 c.37.1.8 (A:8-182) Rab 85.6 0.3 2.2E-05 22.1 3.1 21 66-86 7-27 (175)
432 d1l7vc_ c.37.1.12 (C:) ABC tra 85.6 0.15 1.1E-05 24.2 1.6 25 61-85 23-47 (231)
433 d1xpua3 c.37.1.11 (A:129-417) 85.6 0.61 4.5E-05 20.0 4.7 36 54-89 33-69 (289)
434 d2ew1a1 c.37.1.8 (A:4-174) Rab 85.5 0.3 2.2E-05 22.1 3.1 22 409-430 8-29 (171)
435 d2dy1a2 c.37.1.8 (A:8-274) Elo 85.5 0.67 4.9E-05 19.7 9.3 95 407-505 3-119 (267)
436 d1byia_ c.37.1.10 (A:) Dethiob 85.4 0.44 3.2E-05 20.9 3.9 35 408-442 3-38 (224)
437 d1cp2a_ c.37.1.10 (A:) Nitroge 85.4 0.53 3.9E-05 20.4 4.3 38 408-445 3-40 (269)
438 d2j0sa1 c.37.1.19 (A:22-243) P 85.2 0.68 5E-05 19.6 10.0 13 409-421 57-69 (222)
439 g1f2t.1 c.37.1.12 (A:,B:) Rad5 85.2 0.46 3.3E-05 20.8 3.9 24 66-89 26-49 (292)
440 g1xew.1 c.37.1.12 (X:,Y:) Smc 85.0 0.18 1.3E-05 23.6 1.8 24 65-88 28-51 (329)
441 d2bmea1 c.37.1.8 (A:6-179) Rab 84.8 0.35 2.5E-05 21.7 3.1 21 66-86 8-28 (174)
442 d2erya1 c.37.1.8 (A:10-180) r- 84.7 0.35 2.5E-05 21.6 3.1 21 409-429 8-28 (171)
443 d1l7vc_ c.37.1.12 (C:) ABC tra 84.4 0.27 2E-05 22.4 2.5 23 408-430 27-49 (231)
444 d1hyqa_ c.37.1.10 (A:) Cell di 84.3 0.75 5.5E-05 19.3 4.8 33 67-106 6-38 (232)
445 g1ii8.1 c.37.1.12 (A:,B:) Rad5 84.3 0.41 3E-05 21.1 3.3 28 477-504 301-329 (369)
446 d1m7ba_ c.37.1.8 (A:) RhoE (RN 84.2 0.38 2.7E-05 21.4 3.1 22 409-430 5-26 (179)
447 d1moza_ c.37.1.8 (A:) ADP-ribo 84.2 0.61 4.5E-05 20.0 4.2 28 59-86 13-40 (182)
448 d1vg8a_ c.37.1.8 (A:) Rab7 {Ra 84.1 0.39 2.8E-05 21.4 3.1 21 409-429 5-25 (184)
449 d1kmqa_ c.37.1.8 (A:) RhoA {Hu 84.1 0.39 2.8E-05 21.3 3.1 23 65-87 4-26 (177)
450 d1mkya1 c.37.1.8 (A:2-172) Pro 84.0 0.4 2.9E-05 21.2 3.2 21 408-428 2-22 (171)
451 d1ky3a_ c.37.1.8 (A:) Rab-rela 84.0 0.39 2.9E-05 21.3 3.1 21 409-429 5-25 (175)
452 d2g6ba1 c.37.1.8 (A:58-227) Ra 83.9 0.4 2.9E-05 21.2 3.1 21 409-429 9-29 (170)
453 d1z06a1 c.37.1.8 (A:32-196) Ra 83.8 0.4 2.9E-05 21.2 3.1 21 409-429 5-25 (165)
454 d2bcgy1 c.37.1.8 (Y:3-196) GTP 83.8 0.4 2.9E-05 21.2 3.1 22 66-87 9-30 (194)
455 d1wp9a1 c.37.1.19 (A:1-200) pu 83.8 0.42 3.1E-05 21.1 3.2 34 408-441 25-59 (200)
456 d1yzqa1 c.37.1.8 (A:14-177) Ra 83.8 0.4 2.9E-05 21.2 3.1 21 409-429 3-23 (164)
457 d1xtqa1 c.37.1.8 (A:3-169) GTP 83.7 0.41 3E-05 21.2 3.1 22 65-86 6-27 (167)
458 d2cxxa1 c.37.1.8 (A:2-185) GTP 83.6 0.43 3.1E-05 21.0 3.2 21 408-428 2-22 (184)
459 d2gjsa1 c.37.1.8 (A:91-258) Ra 83.5 0.39 2.9E-05 21.3 3.0 21 409-429 4-24 (168)
460 d2erxa1 c.37.1.8 (A:6-176) di- 83.5 0.39 2.9E-05 21.3 3.0 21 409-429 5-25 (171)
461 d2atxa1 c.37.1.8 (A:9-193) Rho 83.5 0.34 2.5E-05 21.7 2.6 23 65-87 11-33 (185)
462 d2g3ya1 c.37.1.8 (A:73-244) GT 83.5 0.39 2.9E-05 21.3 3.0 21 409-429 6-26 (172)
463 d1puia_ c.37.1.8 (A:) Probable 83.4 0.16 1.1E-05 24.0 0.9 21 407-427 17-37 (188)
464 d1z0ja1 c.37.1.8 (A:2-168) Rab 83.3 0.44 3.2E-05 21.0 3.1 23 65-87 6-28 (167)
465 d1c1ya_ c.37.1.8 (A:) Rap1A {H 83.3 0.44 3.2E-05 20.9 3.1 22 409-430 6-27 (167)
466 d1wf3a1 c.37.1.8 (A:3-180) GTP 83.3 0.49 3.6E-05 20.6 3.4 23 407-429 6-28 (178)
467 d1g16a_ c.37.1.8 (A:) Rab-rela 83.2 0.44 3.2E-05 21.0 3.1 22 66-87 5-26 (166)
468 d1u0la2 c.37.1.8 (A:69-293) Pr 83.1 0.43 3.1E-05 21.0 3.0 36 49-87 84-119 (225)
469 d1xzpa2 c.37.1.8 (A:212-371) T 83.1 0.12 8.8E-06 24.8 0.2 21 66-86 3-23 (160)
470 d1u8za_ c.37.1.8 (A:) Ras-rela 83.1 0.56 4.1E-05 20.2 3.6 25 405-429 3-27 (168)
471 d1p6xa_ c.37.1.1 (A:) Thymidin 83.0 0.31 2.3E-05 22.0 2.3 23 408-430 8-30 (333)
472 d1wmsa_ c.37.1.8 (A:) Rab9a {H 82.9 0.47 3.4E-05 20.8 3.1 21 66-86 9-29 (174)
473 g1ii8.1 c.37.1.12 (A:,B:) Rad5 82.8 0.67 4.9E-05 19.7 3.9 24 65-88 25-48 (369)
474 d2ngra_ c.37.1.8 (A:) CDC42 {H 82.5 0.49 3.5E-05 20.7 3.1 22 66-87 6-27 (191)
475 d1ek0a_ c.37.1.8 (A:) Ypt51 {B 82.3 0.51 3.7E-05 20.5 3.1 22 66-87 6-27 (170)
476 d1x3sa1 c.37.1.8 (A:2-178) Rab 82.0 0.53 3.8E-05 20.4 3.1 22 65-86 9-30 (177)
477 d2b8ta1 c.37.1.24 (A:11-149) T 81.9 0.92 6.7E-05 18.7 8.4 94 409-504 5-104 (139)
478 d1mh1a_ c.37.1.8 (A:) Rac {Hum 81.9 0.53 3.9E-05 20.4 3.1 23 408-430 7-29 (183)
479 d1egaa1 c.37.1.8 (A:4-182) GTP 81.7 0.57 4.2E-05 20.2 3.2 23 64-86 6-28 (179)
480 d1t5la1 c.37.1.19 (A:2-414) Nu 81.7 0.94 6.8E-05 18.7 6.6 54 41-105 10-63 (413)
481 d1w1wa_ c.37.1.12 (A:) Smc hea 81.5 0.54 4E-05 20.3 3.1 42 476-527 352-394 (427)
482 d1e2ka_ c.37.1.1 (A:) Thymidin 81.5 0.41 3E-05 21.1 2.4 23 66-88 7-29 (329)
483 d1svsa1 c.37.1.8 (A:32-60,A:18 81.2 0.5 3.6E-05 20.6 2.8 20 66-85 5-24 (195)
484 g1qhh.1 c.37.1.19 (A:,B:,C:,D: 80.3 0.77 5.6E-05 19.3 3.5 13 493-505 332-344 (623)
485 d1kk8a2 c.37.1.9 (A:1-28,A:77- 80.2 0.84 6.1E-05 19.0 3.7 16 414-429 492-507 (789)
486 d1e2ka_ c.37.1.1 (A:) Thymidin 80.2 0.4 2.9E-05 21.2 2.0 22 409-430 7-28 (329)
487 d1g3qa_ c.37.1.10 (A:) Cell di 80.1 1.1 7.7E-05 18.3 4.4 31 69-106 9-39 (237)
488 d2c78a3 c.37.1.8 (A:9-212) Elo 80.0 1.1 7.8E-05 18.3 8.9 25 405-429 2-26 (204)
489 d1qdea_ c.37.1.19 (A:) Initiat 79.8 1.1 7.9E-05 18.3 10.7 15 408-422 49-63 (212)
490 d1hv8a1 c.37.1.19 (A:3-210) Pu 79.8 1.1 7.9E-05 18.3 9.9 21 408-428 44-64 (208)
491 d1zcba2 c.37.1.8 (A:47-75,A:20 79.7 0.6 4.4E-05 20.0 2.8 19 409-427 5-23 (200)
492 d1qhla_ c.37.1.12 (A:) Cell di 79.7 0.23 1.7E-05 22.9 0.7 24 409-432 27-50 (222)
493 d2gj8a1 c.37.1.8 (A:216-376) P 79.6 0.6 4.4E-05 20.0 2.8 22 408-429 3-24 (161)
494 d1azta2 c.37.1.8 (A:35-65,A:20 79.5 0.62 4.5E-05 19.9 2.8 23 408-430 8-30 (221)
495 d1puia_ c.37.1.8 (A:) Probable 79.4 0.47 3.4E-05 20.8 2.2 24 62-85 15-38 (188)
496 d1j3ba1 c.91.1.1 (A:212-529) P 79.4 0.37 2.7E-05 21.5 1.6 18 64-81 15-32 (318)
497 d1nija1 c.37.1.10 (A:2-223) Hy 79.1 0.43 3.2E-05 21.0 1.9 23 64-86 4-26 (222)
498 d1c9ka_ c.37.1.11 (A:) Adenosy 79.0 0.4 2.9E-05 21.2 1.7 19 409-427 2-20 (180)
499 d2olra1 c.91.1.1 (A:228-540) P 78.6 0.5 3.7E-05 20.5 2.1 17 64-80 15-31 (313)
500 d1osna_ c.37.1.1 (A:) Thymidin 78.5 0.34 2.4E-05 21.8 1.2 29 409-437 8-36 (331)
No 1
>d1qvra3 c.37.1.20 (A:536-850) ClpB, AAA+ modules {Thermus thermophilus [TaxId: 274]}
Probab=100.00 E-value=0 Score=353.30 Aligned_cols=309 Identities=63% Similarity=1.024 Sum_probs=284.2
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCC
Q ss_conf 99667782035789999999852526938999999999999750278999984389995158892799999999996399
Q 005511 354 IPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGS 433 (693)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~l~~~i~Gq~~~i~~l~~~i~~~~~~~~~~~~~~~~ill~Gp~GtGKt~lA~~la~~l~~~ 433 (693)
+|+.++...+.+.+..+++.|.+.++||+++++.+..++..+..++..|.+|.+++||+||||+|||.+|+.||+.+++.
T Consensus 1 ~p~~~~~~~~~~~l~~l~~~L~~~v~GQ~~ai~~v~~~i~~~~~~l~~~~kp~~~~lf~Gp~G~GKt~lak~la~~l~~~ 80 (315)
T d1qvra3 1 IPVSKLLEGEREKLLRLEEELHKRVVGQDEAIRAVADAIRRARAGLKDPNRPIGSFLFLGPTGVGKTELAKTLAATLFDT 80 (315)
T ss_dssp CHHHHTTCCHHHHHHSHHHHHHHHSCSCHHHHHHHHHHHHHHGGGCSCSSSCSEEEEEBSCSSSSHHHHHHHHHHHHHSS
T ss_pred CCCHHHHHHHHHHHHHHHHHHCCEEECHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCC
T ss_conf 99623558799999999999568270879999999999999865789988876699997888624899999999983588
Q ss_pred CCCEEEECCCCCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHCCEEECCCCC
Q ss_conf 75405533543221000110028999876767512266999809998999846742298899999997405646379998
Q 005511 434 EEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGR 513 (693)
Q Consensus 434 ~~~~~~~~~~~~~~~~~~~~l~g~~~~~~g~~~~~~l~~~~~~~~~~vl~iDEid~l~~~~~~~Ll~~le~g~~~~~~~~ 513 (693)
+.+++.++|++|.+.++.+.++|+++||+|+.+++.+.+.+++++++|++|||+||+++.+++.|++++++|.+++..|+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~L~g~~~gyvG~~~~~~l~~~~~~~p~~Vvl~DEieK~~~~v~~~ll~~l~~g~~~~~~gr 160 (315)
T d1qvra3 81 EEAMIRIDMTEYMEKHAVSRLIGAPPGYVGYEEGGQLTEAVRRRPYSVILFDEIEKAHPDVFNILLQILDDGRLTDSHGR 160 (315)
T ss_dssp GGGEEEECTTTCCSSGGGGGC--------------CHHHHHHHCSSEEEEESSGGGSCHHHHHHHHHHHTTTEECCSSSC
T ss_pred CCCEEEEECCCCCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEEHHHHCCHHHHHHHHHHHCCCCEECCCCC
T ss_conf 75348873155454215665148999876746678489999849983799714754078999899998613834279996
Q ss_pred EEECCCEEEEEECCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHCCCCEEECCCCCHHHHHHH
Q ss_conf 33169769999538882566406654455567674311189999889999860176368603594787478999999999
Q 005511 514 TVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEI 593 (693)
Q Consensus 514 ~~~~~~~i~I~tsn~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~r~~~~i~f~~l~~~~~~~i 593 (693)
.+++++++||+|||.+...+...... ............+.+.+.|+|+|++|+|.+++|.|++.+++.+|
T Consensus 161 ~v~~~~~i~i~tsnlG~~~i~~~~~~----------~~~~~~~~~~~~~~l~~~f~pEflnRid~Ii~F~~L~~~~~~~I 230 (315)
T d1qvra3 161 TVDFRNTVIILTSNLGSPLILEGLQK----------GWPYERIRDEVFKVLQQHFRPEFLNRLDEIVVFRPLTKEQIRQI 230 (315)
T ss_dssp CEECTTEEEEEECCTTHHHHHHHHHT----------TCCHHHHHHHHHHHHHTTSCHHHHHTCSBCCBCCCCCHHHHHHH
T ss_pred EECCCCEEEEEECCCCHHHHHHHCCC----------CCCHHHHHHHHHHHHHHHCCHHHHHCCCEEEECCCHHHHHHHHH
T ss_conf 85375428987424576777640011----------22045556778888886238878721780543210245436899
Q ss_pred HHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCC
Q ss_conf 9999999999983099859839889999998044988996037999999989999999870202799989999739984
Q 005511 594 ADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGN 672 (693)
Q Consensus 594 ~~~~l~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~g~r~l~~~i~~~i~~~l~~~~~~~~~~~~~~~~i~~~~~~~ 672 (693)
+...+..+..++...++.+.++++++++|++.+|++.+|||+|++.|++.+..++++.++.+.+.+|++|.|++++++.
T Consensus 231 ~~~~l~~l~~rl~~~~i~l~i~~~~~~~L~~~~y~~~~GAR~L~r~Ie~~i~~~La~~iL~~~~~~g~~i~i~~~~~~l 309 (315)
T d1qvra3 231 VEIQLSYLRARLAEKRISLELTEAAKDFLAERGYDPVFGARPLRRVIQRELETPLAQKILAGEVKEGDRVQVDVGPAGL 309 (315)
T ss_dssp HHHHHHHHHHHHHTTTCEEEECHHHHHHHHHHHCBTTTBTSTHHHHHHHHTHHHHHHHHHHTSSCSSCEEEEECCTTSC
T ss_pred HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCEE
T ss_conf 9999999999987242022066999999999488987782108999999989999999983768998999999979988
No 2
>d1r6bx3 c.37.1.20 (X:437-751) ClpA, an Hsp100 chaperone, AAA+ modules {Escherichia coli [TaxId: 562]}
Probab=100.00 E-value=0 Score=343.44 Aligned_cols=311 Identities=41% Similarity=0.724 Sum_probs=281.4
Q ss_pred CCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCC
Q ss_conf 96677820357899999998525269389999999999997502789999843899951588927999999999963997
Q 005511 355 PVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSE 434 (693)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~l~~~i~Gq~~~i~~l~~~i~~~~~~~~~~~~~~~~ill~Gp~GtGKt~lA~~la~~l~~~~ 434 (693)
|+.++...+.+.+..+++.|.+.|+||+++++.+..++..++.++..+.+|.+++||+||||||||++|+.||+.+ +
T Consensus 1 p~~~~~~~d~~~l~~l~~~L~~~viGQ~~a~~~v~~~v~~~~~~l~~~~~p~~~~lf~Gp~GvGKT~lak~la~~l---~ 77 (315)
T d1r6bx3 1 PEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKAL---G 77 (315)
T ss_dssp CCCCSSSSHHHHHHHHHHHHTTTSCSCHHHHHHHHHHHHHHHTTCSCTTSCSEEEEEECSTTSSHHHHHHHHHHHH---T
T ss_pred CCCCCCHHHHHHHHHHHHHHCCEECCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHC---C
T ss_conf 9520027589999999998588064859999999999999972678888876589997787500699999998633---6
Q ss_pred CCEEEECCCCCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHCCEEECCCCCE
Q ss_conf 54055335432210001100289998767675122669998099989998467422988999999974056463799983
Q 005511 435 EAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRT 514 (693)
Q Consensus 435 ~~~~~~~~~~~~~~~~~~~l~g~~~~~~g~~~~~~l~~~~~~~~~~vl~iDEid~l~~~~~~~Ll~~le~g~~~~~~~~~ 514 (693)
.+|+.+||++|.+.++.+.++|+++||+|+..++.+...+.+.+++|++|||+||+++.+++.|++++++|.+++..|+.
T Consensus 78 ~~~i~~d~s~~~~~~~~~~l~g~~~gy~g~~~~~~l~~~~~~~~~~vvl~DeieKa~~~V~~~lLqild~G~ltd~~Gr~ 157 (315)
T d1r6bx3 78 IELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRK 157 (315)
T ss_dssp CEEEEEEGGGCSSSSCCSSSCCCCSCSHHHHHTTHHHHHHHHCSSEEEEEETGGGSCHHHHHHHHHHHHHSEEEETTTEE
T ss_pred CCEEEECCCCCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHCCCCCCCCHHHHHHHHHHCCCEECCCCCCC
T ss_conf 77067415444554466652146787501146870337777385430221222301633766567762146025889972
Q ss_pred EECCCEEEEEECCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHCCCCEEECCCCCHHHHHHHH
Q ss_conf 31697699995388825664066544555676743111899998899998601763686035947874789999999999
Q 005511 515 VDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIA 594 (693)
Q Consensus 515 ~~~~~~i~I~tsn~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~r~~~~i~f~~l~~~~~~~i~ 594 (693)
+++.++++|+|||.+...+........+ ........+++.+.|+|+|++|++.++.|.|++.+++.+|+
T Consensus 158 vdf~n~iiI~Tsnig~~~i~~~~~~~~~-----------~~~~~~~~~~l~~~f~pEflnRid~ii~f~~l~~~~~~~I~ 226 (315)
T d1r6bx3 158 ADFRNVVLVMTTNAGVRETERKSIGLIH-----------QDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVV 226 (315)
T ss_dssp EECTTEEEEEEECSSCC----------------------------CHHHHHHHSCHHHHTTCSEEEECCCCCHHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHCCCHH-----------HHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHH
T ss_conf 6863258884144016888862000005-----------66667689999975489898663210013630155899999
Q ss_pred HHHHHHHHHHHHCCCCEEEECHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCC-CCE
Q ss_conf 9999999999830998598398899999980449889960379999999899999998702027999899997399-848
Q 005511 595 DIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSD-GNV 673 (693)
Q Consensus 595 ~~~l~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~g~r~l~~~i~~~i~~~l~~~~~~~~~~~~~~~~i~~~~~-~~~ 673 (693)
...+..+..++...++.+.+++++.+++++.+|++.+|||+|++.|++.+..++++.++.+.+.+|.++.|+++.+ +.+
T Consensus 227 ~~~l~~~~~~l~~~~i~l~~~~~a~~~l~~~~yd~~~GaR~L~r~Ie~~i~~~la~~il~~~~~~g~~i~V~~~~~~~~l 306 (315)
T d1r6bx3 227 DKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNEL 306 (315)
T ss_dssp HHHHHHHHHHHHHTTEEEEECHHHHHHHHHHHCBTTTBTTTHHHHHHHHHTHHHHHHHHHSTTTTCEEEEEEEEGGGTEE
T ss_pred HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCEE
T ss_conf 99999999998764862202799999999967897778416999999999999999998576889998999997789989
Q ss_pred EEEECC
Q ss_conf 998389
Q 005511 674 TVLNGS 679 (693)
Q Consensus 674 ~~~~~~ 679 (693)
.+.+..
T Consensus 307 ~~~~~~ 312 (315)
T d1r6bx3 307 TYGFQS 312 (315)
T ss_dssp EEEEEE
T ss_pred EEEEEC
T ss_conf 998613
No 3
>d1qvra2 c.37.1.20 (A:149-535) ClpB, AAA+ modules {Thermus thermophilus [TaxId: 274]}
Probab=100.00 E-value=7.1e-42 Score=301.86 Aligned_cols=301 Identities=59% Similarity=0.953 Sum_probs=273.7
Q ss_pred CCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEE
Q ss_conf 74188887436654320999876688899999999970399998078889997199999999999755999998899669
Q 005511 22 MPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKV 101 (693)
Q Consensus 22 ~~~l~~~~~~l~~~~~~~~~~~ivG~~~~~~~l~~~l~~~~~~~ilL~GppGtGKT~la~~la~~l~~~~~~~~~~~~~~ 101 (693)
++.|++||.+|++.++.+.+++++|++..++++.+.|.+...+|++|.||||+|||++++.+|+.+.++.+|..+.+..+
T Consensus 2 ~~~l~~~~~~l~~~a~~g~ld~~~gr~~ei~~~~~~L~r~~k~n~llvG~~GvGKtaiv~~la~~i~~~~vp~~l~~~~i 81 (387)
T d1qvra2 2 YNALEQYGIDLTRLAAEGKLDPVIGRDEEIRRVIQILLRRTKNNPVLIGEPGVGKTAIVEGLAQRIVKGDVPEGLKGKRI 81 (387)
T ss_dssp CSHHHHHEEEHHHHHHTTCSCCCCSCHHHHHHHHHHHHCSSCCCCEEEECTTSCHHHHHHHHHHHHHHTCSCTTSTTCEE
T ss_pred CHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHHHHHHCCCCHHHCCCEE
T ss_conf 37799997988999985999987480899999999982488999768799998899999999999980899978869668
Q ss_pred EEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCC-CEEEEEECCCHHHHCCCCCCHHHHHHHHHHHHCCCCCEEEEEECHH
Q ss_conf 998652101397446618999999999997089-8499991600331089998847699988331107981799974358
Q 005511 102 ITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSD-EIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180 (693)
Q Consensus 102 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~iL~iDEid~l~~~~~~~~~~~~~~~L~~~l~~~~i~iI~~t~~~ 180 (693)
+.++++.+..|+++.|+++.++..++..+.... +.||||||+|.+...+...++.++.++|++.+.+|.+.+|++|++.
T Consensus 82 ~~ld~~~l~ag~~~~g~~e~r~~~i~~~~~~~~~~~ilfide~h~l~~~g~~~g~~d~a~~Lkp~L~rg~~~~I~~tT~~ 161 (387)
T d1qvra2 82 VSLQMGSLLAGAKYRGEFEERLKAVIQEVVQSQGEVILFIDELHTVVGAGKAEGAVDAGNMLKPALARGELRLIGATTLD 161 (387)
T ss_dssp EEECC-----------CHHHHHHHHHHHHHTTCSSEEEEECCC-------------------HHHHHTTCCCEEEEECHH
T ss_pred EEEEHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCEEEECCHH
T ss_conf 99557666526674136899999999985058996698724088884277787741389999999737885166636899
Q ss_pred HHHHHHHCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
Q ss_conf 89854203988854678311589999999999999999672203766685899999986444100467703466699987
Q 005511 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEA 260 (693)
Q Consensus 181 ~~~~~~~l~~~l~~Rf~~i~~~~p~~~e~~~il~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~a~~~l~~a 260 (693)
+|.. +.-|++|.+||+.|.++.|+.++...|++....+++.+|++.++++++..++.++.+|+.++++|.+|+++++.|
T Consensus 162 ey~~-~e~d~al~rrF~~v~v~ep~~~~~~~il~~~~~~~e~~h~v~~~~~ai~~~v~ls~ryi~~r~~PdKAidlld~a 240 (387)
T d1qvra2 162 EYRE-IEKDPALERRFQPVYVDEPTVEETISILRGLKEKYEVHHGVRISDSAIIAAATLSHRYITERRLPDKAIDLIDEA 240 (387)
T ss_dssp HHHH-HTTCTTTCSCCCCEEECCCCHHHHHHHHHHHHHHHHHHTTCEECHHHHHHHHHHHHHHCCSSCTHHHHHHHHHHH
T ss_pred HHHH-HCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH
T ss_conf 9987-633679998246112799867889999999999987404774669999999985023666566704688999999
Q ss_pred HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH---HHHHHHHHHHHHHHHHH
Q ss_conf 5688884117937899999999999998879730743688766688---99999999999886546
Q 005511 261 GSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRD---REMDLKAQISALVDKGK 323 (693)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~i~~---~~~~l~~~~~~~~~~~~ 323 (693)
++.+++.....|..++.++..+..+..+.....+..+......+.. ....+......+...|.
T Consensus 241 ~a~~~i~~~s~P~el~~ler~I~qLe~E~~aL~ke~d~~s~~rl~~le~el~~lee~~~~L~~~w~ 306 (387)
T d1qvra2 241 AARLRMALESAPEEIDALERKKLQLEIEREALKKEKDPDSQERLKAIEAEIAKLTEEIAKLRAEWE 306 (387)
T ss_dssp HHHHHHTTTTHHHHHHHHHHHHHHHHHHHHHHSSCSSHHHHSCTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999986415895889999999999999999987401457888876533235679999999999998
No 4
>d1r6bx2 c.37.1.20 (X:169-436) ClpA, an Hsp100 chaperone, AAA+ modules {Escherichia coli [TaxId: 562]}
Probab=100.00 E-value=2.4e-37 Score=270.64 Aligned_cols=245 Identities=55% Similarity=0.948 Sum_probs=232.6
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEE
Q ss_conf 88887436654320999876688899999999970399998078889997199999999999755999998899669998
Q 005511 25 LEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITL 104 (693)
Q Consensus 25 l~~~~~~l~~~~~~~~~~~ivG~~~~~~~l~~~l~~~~~~~ilL~GppGtGKT~la~~la~~l~~~~~~~~~~~~~~~~~ 104 (693)
|.+|+.||+++++.+.+++++|++++++++.+.|.+...+|++|+||||+|||++++.+|+.+..+.+|..+.+..++.+
T Consensus 1 L~~~~~dlt~~a~~~~ld~~igRd~Ei~~l~~iL~r~~k~n~lLVG~~GvGKTalv~~la~ri~~~~vp~~l~~~~i~~l 80 (268)
T d1r6bx2 1 LENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSL 80 (268)
T ss_dssp CCSSSCBHHHHHHTTCSCCCCSCHHHHHHHHHHHTSSSSCEEEEECCTTSSHHHHHHHHHHHHHHTCSCGGGTTCEEEEC
T ss_pred CHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEE
T ss_conf 90776878999984999866380999999999995476689679888988677999999999981784500035412786
Q ss_pred ECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHCCCCCC-HHHHHHHHHHHHCCCCCEEEEEECHHHHH
Q ss_conf 65210139744661899999999999708984999916003310899988-47699988331107981799974358898
Q 005511 105 DMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEG-AIDAANILKPSLARGELQCIGATTLDEYR 183 (693)
Q Consensus 105 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~iL~iDEid~l~~~~~~~~-~~~~~~~L~~~l~~~~i~iI~~t~~~~~~ 183 (693)
+++.+..|+++.|+++.++..++..+...+..||||||+|.++..+...+ +.+..++|++.+.+|++.+|++|++.++.
T Consensus 81 ~~~~liag~~~~g~~e~r~~~i~~~~~~~~~iIlfiDeih~l~~~g~~~g~~~d~a~~Lkp~L~rg~i~vIgatT~eey~ 160 (268)
T d1r6bx2 81 DIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFS 160 (268)
T ss_dssp CCC---CCCCCSSCHHHHHHHHHHHHSSSSCEEEEETTTTTTTTSCCSSSCHHHHHHHHSSCSSSCCCEEEEEECHHHHH
T ss_pred EECHHHCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCHHHHH
T ss_conf 40567506763005899999999986126784688433698862777788641179876488747987599957999999
Q ss_pred HHHHCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
Q ss_conf 54203988854678311589999999999999999672203766685899999986444100467703466699987568
Q 005511 184 KHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSR 263 (693)
Q Consensus 184 ~~~~l~~~l~~Rf~~i~~~~p~~~e~~~il~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~a~~~l~~a~~~ 263 (693)
..+..|++|.+||+.|.++.|+.++...|++....+++.++++.++++++..++.++.+|++++.+|.+|++++++|++.
T Consensus 161 ~~~e~d~al~rrF~~I~V~Eps~e~t~~IL~~~~~~~e~~h~v~~~~~al~~~v~ls~ryi~~~~~PdKAIdllDea~a~ 240 (268)
T d1r6bx2 161 NIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGAR 240 (268)
T ss_dssp CCCCCTTSSGGGEEEEECCCCCHHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHCTTSCTTHHHHHHHHHHHHH
T ss_pred HHHHHCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
T ss_conf 99861678886521003689899999999998668885268778574789999999985604788984899999999999
Q ss_pred HHHHHC
Q ss_conf 888411
Q 005511 264 VRLRHA 269 (693)
Q Consensus 264 ~~~~~~ 269 (693)
+++...
T Consensus 241 ~~~~~~ 246 (268)
T d1r6bx2 241 ARLMPV 246 (268)
T ss_dssp HHHSSS
T ss_pred HHHHCC
T ss_conf 985002
No 5
>d1um8a_ c.37.1.20 (A:) ClpX {Helicobacter pylori [TaxId: 210]}
Probab=100.00 E-value=1.8e-36 Score=264.59 Aligned_cols=284 Identities=24% Similarity=0.324 Sum_probs=219.7
Q ss_pred HHHHHHHHHCCCCCHHHHHHHHHHHHHHHH---------------------HCCCCCCCCCEEEEEECCCCCCHHHHHHH
Q ss_conf 999999985252693899999999999975---------------------02789999843899951588927999999
Q 005511 367 LLKMEETLHKRVIGQDEAVKAISRAIRRAR---------------------VGLKNPNRPIASFIFSGPTGVGKSELAKA 425 (693)
Q Consensus 367 ~~~~~~~l~~~i~Gq~~~i~~l~~~i~~~~---------------------~~~~~~~~~~~~ill~Gp~GtGKt~lA~~ 425 (693)
...+.+.|.+.|+||++|++.++.+++.+. .+...+.+|+.++||.||||||||++|+.
T Consensus 8 P~ei~~~L~~~ViGQd~Akkava~Avrn~~rR~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~niLfiGPTGvGKTElAk~ 87 (364)
T d1um8a_ 8 PKELKAVLDNYVIGQEQAKKVFSVAVYNHYKRLSFKEKLKKQDNQDSNVELEHLEEVELSKSNILLIGPTGSGKTLMAQT 87 (364)
T ss_dssp HHHHHHHHHTTCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHCSHHHHHHHHHHHHTTCCCCCEEEECCTTSSHHHHHHH
T ss_pred HHHHHHHHCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHH
T ss_conf 79999995896238089999999999989988877887640444433111122334567875324418998637899999
Q ss_pred HHHHHCCCCCCEEEECCCCCCCHHHHHHHCCCCCCCCCCCCCCHHHHH-------HHCCCCEEEEECCCCC---------
Q ss_conf 999963997540553354322100011002899987676751226699-------9809998999846742---------
Q 005511 426 LAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEA-------VRRRPYTVVLFDEIEK--------- 489 (693)
Q Consensus 426 la~~l~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~g~~~~~~l~~~-------~~~~~~~vl~iDEid~--------- 489 (693)
||+.+ +.+|+.+||++|.+ .||+|.+.++.+... ++.++++|++|||+|+
T Consensus 88 LA~~~---~~~~ir~D~s~~~e-----------~gyvg~dv~~~i~~l~~~~~~~v~~~~~~iv~lDEieK~~~~s~~~~ 153 (364)
T d1um8a_ 88 LAKHL---DIPIAISDATSLTE-----------AGYVGEDVENILTRLLQASDWNVQKAQKGIVFIDEIDKISRLSENRS 153 (364)
T ss_dssp HHHHT---TCCEEEEEGGGCC-------------------CTHHHHHHHHHTTTCHHHHTTSEEEEETGGGC--------
T ss_pred HHHHC---CCCEEEHHHHHCCC-----------CHHHHHHHCCCHHHHHHHCHHHHHHHHCCCCHHHHHHHHCCCCCCCC
T ss_conf 98644---35331112220144-----------31667631210344542024589986546301016665313454455
Q ss_pred -----CCHHHHHHHHHHHHCCE--EECCCCCEEECCCEEEEEECCC---------CHHHHH---HCCCCCCCCCCCCCCC
Q ss_conf -----29889999999740564--6379998331697699995388---------825664---0665445556767431
Q 005511 490 -----AHPDVFNMMLQILEDGR--LTDSKGRTVDFKNTLLIMTSNV---------GSSVIE---KGGRRIGFDLDYDEKD 550 (693)
Q Consensus 490 -----l~~~~~~~Ll~~le~g~--~~~~~~~~~~~~~~i~I~tsn~---------~~~~i~---~~~~~~~~~~~~~~~~ 550 (693)
.++.+++.||++++++. +++..|+..++.+.+++.|+|. +...+. ......+|........
T Consensus 154 ~~~d~a~~~V~~~lLqild~~~~~~~~~~gr~~~~~~~i~i~t~~i~~~~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (364)
T d1um8a_ 154 ITRDVSGEGVQQALLKIVEGSLVNIPPKGGRKHPEGNFIQIDTSDILFICAGAFDGLAEIIKKRTTQNVLGFTQEKMSKK 233 (364)
T ss_dssp ------CHHHHHHHHHHHHCCEEC---------------CEECTTCEEEEEECCTTHHHHTTTSCSSCCCSCCCSSCCTT
T ss_pred CCCCCCCHHHHHHHHHHHCCCEECCCCCCCCCCCCCEEEEEEEHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCHH
T ss_conf 55122143889864554058612258777876776416899611345541113101456654301445431000110012
Q ss_pred CHHHHHHHHHH-HHHHHCCCHHHHHCCCCEEECCCCCHHHHHHHHHH----HHHHHHHHHHCCCCEEEECHHHHHHHHHH
Q ss_conf 11899998899-99860176368603594787478999999999999----99999999830998598398899999980
Q 005511 551 SSYNRIKSLVT-EELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADI----MLKEVFDRLKTKDIELQVTERFRERVVEE 625 (693)
Q Consensus 551 ~~~~~l~~~~~-~~~~~~~~~~l~~r~~~~i~f~~l~~~~~~~i~~~----~l~~~~~~~~~~~~~l~~~~~~~~~l~~~ 625 (693)
.....+..... ..+...|.|+|++|++.++.|.||+.+++.+|+.. .+.++...+...++.+.|+++++++|++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~f~PEf~gRi~~iv~f~~L~~~~l~~Il~~~~~~l~kq~~~~l~~~gi~L~~td~a~~~la~~ 313 (364)
T d1um8a_ 234 EQEAILHLVQTHDLVTYGLIPELIGRLPVLSTLDSISLEAMVDILQKPKNALIKQYQQLFKMDEVDLIFEEEAIKEIAQL 313 (364)
T ss_dssp TTTTSGGGCCHHHHHHTTCCHHHHTTCCEEEECCCCCHHHHHHHHHSSTTCHHHHHHHHHHTTTCEEEECHHHHHHHHHH
T ss_pred HHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHH
T ss_conf 46665302457877653007999987230155740209999999987999999999999875792799989999999995
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEC
Q ss_conf 4498899603799999998999999987020279998999973
Q 005511 626 GYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVD 668 (693)
Q Consensus 626 ~~~~~~g~r~l~~~i~~~i~~~l~~~~~~~~~~~~~~~~i~~~ 668 (693)
+|++++|||+|++.|++.+...+++ .+...+.++.|+.+
T Consensus 314 g~d~~~GAR~L~riie~~l~~~~f~----~p~~~~~~v~I~~~ 352 (364)
T d1um8a_ 314 ALERKTGARGLRAIIEDFCLDIMFD----LPKLKGSEVRITKD 352 (364)
T ss_dssp HHHTTCTGGGHHHHHHHHHHHHHHT----GGGGTTSEEEECHH
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHCC----CCCCCCCEEEECHH
T ss_conf 6587778367899999999998555----87789999997778
No 6
>d1jbka_ c.37.1.20 (A:) ClpB, AAA+ modules {Escherichia coli [TaxId: 562]}
Probab=99.96 E-value=5e-29 Score=213.41 Aligned_cols=193 Identities=65% Similarity=1.090 Sum_probs=180.3
Q ss_pred CCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEE
Q ss_conf 74188887436654320999876688899999999970399998078889997199999999999755999998899669
Q 005511 22 MPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKV 101 (693)
Q Consensus 22 ~~~l~~~~~~l~~~~~~~~~~~ivG~~~~~~~l~~~l~~~~~~~ilL~GppGtGKT~la~~la~~l~~~~~~~~~~~~~~ 101 (693)
...|++|+.||+++++.+.+++++|++++++++.+.+.+...+|++|+||||+|||++++.+|+.+..+.+|..+.+.++
T Consensus 2 ~~~l~~~~~dlt~~a~~g~ld~~igRd~Ei~~l~~iL~r~~k~n~lLvG~pGVGKTalv~~LA~ri~~~~vp~~L~~~~i 81 (195)
T d1jbka_ 2 MQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRV 81 (195)
T ss_dssp CHHHHHHEEEHHHHHHTTCSCCCCSCHHHHHHHHHHHTSSSSCEEEEECCTTSCHHHHHHHHHHHHHHTCSCGGGTTCEE
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCHHHCCCEE
T ss_conf 58999998988999983999987280999999999995358887399835875447999999999980899978818569
Q ss_pred EEEECCCCCCCCCCCCHHHHHHHHHHHHHHHC-CCEEEEEECCCHHHHCCCCCCHHHHHHHHHHHHCCCCCEEEEEECHH
Q ss_conf 99865210139744661899999999999708-98499991600331089998847699988331107981799974358
Q 005511 102 ITLDMGLLVAGTKYRGEFEERLKKLMEEIKQS-DEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLD 180 (693)
Q Consensus 102 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~iL~iDEid~l~~~~~~~~~~~~~~~L~~~l~~~~i~iI~~t~~~ 180 (693)
+.++.+.+.+++++.|+++++++.++..+... ...||||||+|.+...+...++.+..++|++.++++++.+|++|++.
T Consensus 82 ~~ld~~~LiAg~~~rG~~E~rl~~il~e~~~~~~~iILfIDeih~l~~~g~~~g~~d~~~~Lkp~L~rg~l~~IgatT~e 161 (195)
T d1jbka_ 82 LALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLD 161 (195)
T ss_dssp EEECHHHHHTTTCSHHHHHHHHHHHHHHHHHSTTTEEEEEETGGGGTT------CCCCHHHHHHHHHTTSCCEEEEECHH
T ss_pred EEEEHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCHH
T ss_conf 99669998645874077999999999987317980899726089984378777752389999999857995498518999
Q ss_pred HHHHHHHCCHHHHCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 8985420398885467831158999999999999
Q 005511 181 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILK 214 (693)
Q Consensus 181 ~~~~~~~l~~~l~~Rf~~i~~~~p~~~e~~~il~ 214 (693)
+|...+.-|++|.+||+.|.++.|+.++...|++
T Consensus 162 ey~~~~e~d~aL~rrF~~I~V~Ep~~e~t~~IL~ 195 (195)
T d1jbka_ 162 EYRQYIEKDAALERRFQKVFVAEPSVEDTIAILR 195 (195)
T ss_dssp HHHHHTTTCHHHHTTEEEEECCCCCHHHHHTTCC
T ss_pred HHHHHHHCCHHHHHCCCEEECCCCCHHHHHHHHC
T ss_conf 9999987388999639875458989899999859
No 7
>d1ofha_ c.37.1.20 (A:) HslU {Haemophilus influenzae [TaxId: 727]}
Probab=99.96 E-value=8.3e-28 Score=204.97 Aligned_cols=257 Identities=23% Similarity=0.353 Sum_probs=179.9
Q ss_pred HHHHHHHHCCCCCHHHHHHHHHHHHHHHH--HCCCCC---CCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEECC
Q ss_conf 99999985252693899999999999975--027899---9984389995158892799999999996399754055335
Q 005511 368 LKMEETLHKRVIGQDEAVKAISRAIRRAR--VGLKNP---NRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDM 442 (693)
Q Consensus 368 ~~~~~~l~~~i~Gq~~~i~~l~~~i~~~~--~~~~~~---~~~~~~ill~Gp~GtGKt~lA~~la~~l~~~~~~~~~~~~ 442 (693)
..+++.|.+.|+||++|++.+..+++.+. .+...+ ..|..++||+||||||||++|+++|+.+ +.+|+.+++
T Consensus 6 ~~i~~~L~~~ViGQd~A~~~l~~av~~~~~r~~~~~~~~~~~~~~~iLl~GPpG~GKT~lAkalA~~~---~~~~~~i~~ 82 (309)
T d1ofha_ 6 REIVSELDQHIIGQADAKRAVAIALRNRWRRMQLQEPLRHEVTPKNILMIGPTGVGKTEIARRLAKLA---NAPFIKVEA 82 (309)
T ss_dssp HHHHHHHHTTCCSCHHHHHHHHHHHHHHHHTTSSCHHHHHHCCCCCEEEECCTTSSHHHHHHHHHHHH---TCCEEEEEG
T ss_pred HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHCC---CCCHHCCCC
T ss_conf 99999965813491999999999999898772457877667898669998999988889999986213---221000344
Q ss_pred CCCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCEEEEECCCCCCCHH------------HHHHHHHHHHCCEEECC
Q ss_conf 432210001100289998767675122669998099989998467422988------------99999997405646379
Q 005511 443 SEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPD------------VFNMMLQILEDGRLTDS 510 (693)
Q Consensus 443 ~~~~~~~~~~~l~g~~~~~~g~~~~~~l~~~~~~~~~~vl~iDEid~l~~~------------~~~~Ll~~le~g~~~~~ 510 (693)
+++.+.+......+.+.++++...+..+... ..++||||||+|++++. +++.|++.+++..+..
T Consensus 83 s~~~~~~~~~~~~~~~~~~~f~~a~~~~~~~---~~~~IIf~DEIdki~~~~~~~~~~~~~~gv~~~LL~~~dg~~~~~- 158 (309)
T d1ofha_ 83 TKFTEVGYVGKEVDSIIRDLTDSAGGAIDAV---EQNGIVFIDEIDKICKKGEYSGADVSREGVQRDLLPLVEGSTVST- 158 (309)
T ss_dssp GGGSSCCSGGGSTTHHHHHHHHTTTTCHHHH---HHHCEEEEECGGGGSCCSSCCSSHHHHHHHHHHHHHHHHCCEEEE-
T ss_pred CCCCCCEEEEEECCCCCCCCCHHHHCCCCCC---CCCCEEEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCEEEC-
T ss_conf 3301011576411333333212331232003---578568842464540301576412012579987528861988855-
Q ss_pred CCCEEECCCEEEEEECCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHCCCCEEECCCCCHHHH
Q ss_conf 99833169769999538882566406654455567674311189999889999860176368603594787478999999
Q 005511 511 KGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEV 590 (693)
Q Consensus 511 ~~~~~~~~~~i~I~tsn~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~r~~~~i~f~~l~~~~~ 590 (693)
....+++++++||++.+.... . ...+.|+|.+||+.++.|.+++..++
T Consensus 159 ~~~~i~~s~ilfi~~ga~~~~-------------------~-------------~~~~~p~l~~R~~~~i~~~~~~~~~~ 206 (309)
T d1ofha_ 159 KHGMVKTDHILFIASGAFQVA-------------------R-------------PSDLIPELQGRLPIRVELTALSAADF 206 (309)
T ss_dssp TTEEEECTTCEEEEEECCSSS-------------------C-------------GGGSCHHHHHTCCEEEECCCCCHHHH
T ss_pred CCEEEECCCEEEEECCCHHHC-------------------C-------------CCCCHHHHHHHHHEEEECCCCCHHHH
T ss_conf 880797462268704612214-------------------7-------------20012544310200300257887999
Q ss_pred HHHHHHHH----HHHHHHHHCCCCEEEECHHHHHHHHHH-----CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 99999999----999999830998598398899999980-----449889960379999999899999998702027999
Q 005511 591 KEIADIML----KEVFDRLKTKDIELQVTERFRERVVEE-----GYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGD 661 (693)
Q Consensus 591 ~~i~~~~l----~~~~~~~~~~~~~l~~~~~~~~~l~~~-----~~~~~~g~r~l~~~i~~~i~~~l~~~~~~~~~~~~~ 661 (693)
.+|+.... ..........+..+.+++.+..+.... .+..+.|+|.|++.+++.+...++. .....+.
T Consensus 207 ~~Il~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GaR~L~~~ie~i~~~~~~~----~~~~~~~ 282 (309)
T d1ofha_ 207 ERILTEPHASLTEQYKALMATEGVNIAFTTDAVKKIAEAAFRVNEKTENIGARRLHTVMERLMDKISFS----ASDMNGQ 282 (309)
T ss_dssp HHHHHSSTTCHHHHHHHHHHHTTCEEEECHHHHHHHHHHHHHHHHHSCCCTTHHHHHHHHHHSHHHHHH----GGGCTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCHHCCCHHHHHHHHHHHHHHHCC----CCCCCCC
T ss_conf 999988898889999998750277521004899999888878740442007468999999999999703----5436998
Q ss_pred EEEEEE
Q ss_conf 899997
Q 005511 662 SVIVDV 667 (693)
Q Consensus 662 ~~~i~~ 667 (693)
.+.|+.
T Consensus 283 ~v~i~~ 288 (309)
T d1ofha_ 283 TVNIDA 288 (309)
T ss_dssp EEEECH
T ss_pred EEEECH
T ss_conf 899889
No 8
>d1g41a_ c.37.1.20 (A:) HslU {Haemophilus influenzae [TaxId: 727]}
Probab=99.95 E-value=2.7e-25 Score=187.65 Aligned_cols=153 Identities=20% Similarity=0.330 Sum_probs=120.6
Q ss_pred CEEEEECCCCCCC------------HHHHHHHHHHHHCCEEECCCCCEEECCCEEEEEECCCCHHHHHHCCCCCCCCCCC
Q ss_conf 9899984674229------------8899999997405646379998331697699995388825664066544555676
Q 005511 479 YTVVLFDEIEKAH------------PDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDY 546 (693)
Q Consensus 479 ~~vl~iDEid~l~------------~~~~~~Ll~~le~g~~~~~~~~~~~~~~~i~I~tsn~~~~~i~~~~~~~~~~~~~ 546 (693)
++++|+||+++.. ..++..++..++...+....+ .+...+.++|+++.+...
T Consensus 250 ~~~~~~dei~k~~~~~~~~g~d~~~eg~~~~ll~~~e~~~v~~~~~-~~~~~~~l~i~~~~~~~~--------------- 313 (443)
T d1g41a_ 250 NGIVFIDEIDKICKKGEYSGADVSREGVQRDLLPLVEGSTVSTKHG-MVKTDHILFIASGAFQVA--------------- 313 (443)
T ss_dssp HCEEEEETGGGGSCCSSCSSSHHHHHHHHHHHHHHHHCCEEEETTE-EEECTTCEEEEEECCSSC---------------
T ss_pred CCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCC-CCCCCCHHHCCCCCHHHC---------------
T ss_conf 6755542233443035677877430013454432014665455566-445421000146522221---------------
Q ss_pred CCCCCHHHHHHHHHHHHHHHCCCHHHHHCCCCEEECCCCCHHHHHHHH----HHHHHHHHHHHHCCCCEEEECHHHHHHH
Q ss_conf 743111899998899998601763686035947874789999999999----9999999999830998598398899999
Q 005511 547 DEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIA----DIMLKEVFDRLKTKDIELQVTERFRERV 622 (693)
Q Consensus 547 ~~~~~~~~~l~~~~~~~~~~~~~~~l~~r~~~~i~f~~l~~~~~~~i~----~~~l~~~~~~~~~~~~~l~~~~~~~~~l 622 (693)
..|. |-|+|++||+.++.+.+|+.+++..|+ ...+.++...+...++.+.|++++++.+
T Consensus 314 ----~~~g-------------liPEliGRlPi~v~L~~L~~~dL~rILtEPknsLikQy~~lf~~~gv~L~ft~~al~~i 376 (443)
T d1g41a_ 314 ----RPSD-------------LIPELQGRLPIRVELTALSAADFERILTEPHASLTEQYKALMATEGVNIAFTTDAVKKI 376 (443)
T ss_dssp ----CGGG-------------SCHHHHTTCCEEEECCCCCHHHHHHHHHSSTTCHHHHHHHHHHTTTCEEEECHHHHHHH
T ss_pred ----CCCC-------------CHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECHHHHHHH
T ss_conf ----5443-------------21533463589997467449999999872442289999999863596799747999999
Q ss_pred HHHCCC-----CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEC
Q ss_conf 980449-----8899603799999998999999987020279998999973
Q 005511 623 VEEGYN-----PSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVD 668 (693)
Q Consensus 623 ~~~~~~-----~~~g~r~l~~~i~~~i~~~l~~~~~~~~~~~~~~~~i~~~ 668 (693)
++.++. .+.|||.|+..+++.+...+++. +...+..+.|+.+
T Consensus 377 A~~A~~~n~~~~~~GAR~Lr~i~E~~l~~~~f~~----p~~~~~~v~Id~~ 423 (443)
T d1g41a_ 377 AEAAFRVNEKTENIGARRLHTVMERLMDKISFSA----SDMNGQTVNIDAA 423 (443)
T ss_dssp HHHHHHHHHHSCCCGGGHHHHHHHHHHHHHHHHG----GGCTTCEEEECHH
T ss_pred HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCC----CCCCCCEEEECHH
T ss_conf 9999985433346786188999999989874358----7889978998799
No 9
>d1ixza_ c.37.1.20 (A:) AAA domain of cell division protein FtsH {Thermus thermophilus [TaxId: 274]}
Probab=99.94 E-value=7.7e-26 Score=191.45 Aligned_cols=199 Identities=26% Similarity=0.334 Sum_probs=154.9
Q ss_pred CCCCCCCCCHHHHHHHHHHH------------HCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEC
Q ss_conf 99987668889999999997------------039999807888999719999999999975599999889966999865
Q 005511 39 GKLDPVVGRQPQIERVVQIL------------GRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDM 106 (693)
Q Consensus 39 ~~~~~ivG~~~~~~~l~~~l------------~~~~~~~ilL~GppGtGKT~la~~la~~l~~~~~~~~~~~~~~~~~~~ 106 (693)
-+|++++|.+++++.+.+.+ +...++++||+||||||||++|+++|+++ +.+++++++
T Consensus 6 ~~~~di~G~~~~k~~l~~~i~~l~~~~~~~~~g~~~~~giLl~GppGtGKT~la~aia~~~----------~~~~~~i~~ 75 (247)
T d1ixza_ 6 VTFKDVAGAEEAKEELKEIVEFLKNPSRFHEMGARIPKGVLLVGPPGVGKTHLARAVAGEA----------RVPFITASG 75 (247)
T ss_dssp CCGGGCCSCHHHHHHHHHHHHHHHCHHHHHHTTCCCCSEEEEECCTTSSHHHHHHHHHHHT----------TCCEEEEEH
T ss_pred CCHHHHCCHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHC----------CCCEEEEEH
T ss_conf 7499971579999999999999879999997599988648876689888359999999873----------997799786
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHCCCCCC---H---HHHHHHHHHHHC----CCCCEEEEE
Q ss_conf 210139744661899999999999708984999916003310899988---4---769998833110----798179997
Q 005511 107 GLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEG---A---IDAANILKPSLA----RGELQCIGA 176 (693)
Q Consensus 107 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~iL~iDEid~l~~~~~~~~---~---~~~~~~L~~~l~----~~~i~iI~~ 176 (693)
+.+. .++.|+.+..++.+|..++...|+||||||+|.++..+.... . ....+.|+..++ ...+++|++
T Consensus 76 ~~l~--~~~~g~~~~~l~~~f~~a~~~~p~Ii~iDeid~l~~~r~~~~~~~~~~~~~~~~~ll~~~d~~~~~~~vivi~t 153 (247)
T d1ixza_ 76 SDFV--EMFVGVGAARVRDLFETAKRHAPCIVFIDEIDAVGRKRGSGVGGGNDEREQTLNQLLVEMDGFEKDTAIVVMAA 153 (247)
T ss_dssp HHHH--HSCTTHHHHHHHHHHHHHTTSSSEEEEEETHHHHHC---------CHHHHHHHHHHHHHHHTCCTTCCEEEEEE
T ss_pred HHHH--HCCCCHHHHHHHHHHHHHHHCCCEEEEEECHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEE
T ss_conf 9964--62453899999999999997699799997736647467899888758999999999999638777899899980
Q ss_pred ECHHHHHHHHHCCHHHHC--CCC-CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCHHH
Q ss_conf 435889854203988854--678-31158999999999999999967220376668589999998644410046770346
Q 005511 177 TTLDEYRKHIEKDPALER--RFQ-PVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKA 253 (693)
Q Consensus 177 t~~~~~~~~~~l~~~l~~--Rf~-~i~~~~p~~~e~~~il~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~a 253 (693)
||.+. .+|+++++ ||+ .++|++|+.++|.+|++.++.+.. . ..+..+..+++.+.+|.+ ++.
T Consensus 154 Tn~~~-----~ld~al~R~~Rf~~~i~~~~P~~~eR~~il~~~l~~~~----~-~~~~~~~~la~~t~g~s~-----~di 218 (247)
T d1ixza_ 154 TNRPD-----ILDPALLRPGRFDRQIAIDAPDVKGREQILRIHARGKP----L-AEDVDLALLAKRTPGFVG-----ADL 218 (247)
T ss_dssp ESCGG-----GSCGGGGSTTSSCEEEECCSCCHHHHHHHHHHHHTTSC----B-CTTCCHHHHHHTCTTCCH-----HHH
T ss_pred CCCCC-----CCCHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCC----C-CCCCCHHHHHHHCCCCCH-----HHH
T ss_conf 79940-----06996758987857999799699999999998750657----7-654689999977889889-----999
Q ss_pred HHHHHHHHHHH
Q ss_conf 66999875688
Q 005511 254 IDLIDEAGSRV 264 (693)
Q Consensus 254 ~~~l~~a~~~~ 264 (693)
..+++.|...+
T Consensus 219 ~~lv~~A~l~a 229 (247)
T d1ixza_ 219 ENLLNEAALLA 229 (247)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
T ss_conf 99999999999
No 10
>d1lv7a_ c.37.1.20 (A:) AAA domain of cell division protein FtsH {Escherichia coli [TaxId: 562]}
Probab=99.94 E-value=2.6e-25 Score=187.78 Aligned_cols=198 Identities=25% Similarity=0.310 Sum_probs=155.7
Q ss_pred CCCCCCCCCHHHHHHHHHHHH------------CCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEC
Q ss_conf 999876688899999999970------------39999807888999719999999999975599999889966999865
Q 005511 39 GKLDPVVGRQPQIERVVQILG------------RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDM 106 (693)
Q Consensus 39 ~~~~~ivG~~~~~~~l~~~l~------------~~~~~~ilL~GppGtGKT~la~~la~~l~~~~~~~~~~~~~~~~~~~ 106 (693)
-++++++|.+++++++.+.+. ...++++|||||||||||++|+++|+++ +.+++++++
T Consensus 9 ~t~~Di~Gl~~~k~~l~e~v~~~~~~~~~~~~g~~~~~~iLL~GppGtGKT~la~~iA~~~----------~~~~~~i~~ 78 (256)
T d1lv7a_ 9 TTFADVAGCDEAKEEVAELVEYLREPSRFQKLGGKIPKGVLMVGPPGTGKTLLAKAIAGEA----------KVPFFTISG 78 (256)
T ss_dssp CCGGGSCSCHHHHHHTHHHHHHHHCGGGC-----CCCCEEEEECCTTSCHHHHHHHHHHHH----------TCCEEEECS
T ss_pred CCHHHHHCHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHC----------CCCEEEEEH
T ss_conf 8999981639999999999999879999998699988867866899888228999999982----------998799886
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHCCCCCC---HH---HHHHHHHHHHC----CCCCEEEEE
Q ss_conf 210139744661899999999999708984999916003310899988---47---69998833110----798179997
Q 005511 107 GLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEG---AI---DAANILKPSLA----RGELQCIGA 176 (693)
Q Consensus 107 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~iL~iDEid~l~~~~~~~~---~~---~~~~~L~~~l~----~~~i~iI~~ 176 (693)
+.+. ..|.|+.+..++.+|..++...|+||||||+|.++..+.... .. ...+.|+..++ ...+.+|++
T Consensus 79 ~~l~--~~~~g~~~~~l~~~f~~A~~~~P~il~iDeiD~l~~~r~~~~~~~~~~~~~~~~~ll~~~d~~~~~~~v~vIat 156 (256)
T d1lv7a_ 79 SDFV--EMFVGVGASRVRDMFEQAKKAAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAA 156 (256)
T ss_dssp CSST--TSCCCCCHHHHHHHHHHHHTTCSEEEEETTHHHHTCCCSTTSCCTTCHHHHHHHHHHHHHHTCCSSSCEEEEEE
T ss_pred HHHH--HCCHHHHHHHHHHHHHHHHHCCCEEEEEECHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEE
T ss_conf 9942--60010789999999999997599899997756657567898888748999999999999538777799899980
Q ss_pred ECHHHHHHHHHCCHHHHC--CCC-CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCHHH
Q ss_conf 435889854203988854--678-31158999999999999999967220376668589999998644410046770346
Q 005511 177 TTLDEYRKHIEKDPALER--RFQ-PVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKA 253 (693)
Q Consensus 177 t~~~~~~~~~~l~~~l~~--Rf~-~i~~~~p~~~e~~~il~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~a 253 (693)
||.++ .+|+++++ ||+ .+.|++|+.++|..|++.+..+. +.. .+..+..+++.+.||.+ ++.
T Consensus 157 Tn~~~-----~ld~al~R~gRfd~~i~i~~P~~~~R~~il~~~l~~~----~~~-~~~~~~~la~~t~G~s~-----adi 221 (256)
T d1lv7a_ 157 TNRPD-----VLDPALLRPGRFDRQVVVGLPDVRGREQILKVHMRRV----PLA-PDIDAAIIARGTPGFSG-----ADL 221 (256)
T ss_dssp ESCTT-----TSCGGGGSTTSSCEEEECCCCCHHHHHHHHHHHHTTS----CBC-TTCCHHHHHHTCTTCCH-----HHH
T ss_pred CCCCC-----CCCHHHCCCCCCCEEEECCCCCHHHHHHHHHHHCCCC----CCC-CCCCHHHHHHHCCCCCH-----HHH
T ss_conf 79931-----0798576898787798779959999999999842599----868-65699999986899899-----999
Q ss_pred HHHHHHHHHH
Q ss_conf 6699987568
Q 005511 254 IDLIDEAGSR 263 (693)
Q Consensus 254 ~~~l~~a~~~ 263 (693)
..++..|...
T Consensus 222 ~~l~~~A~~~ 231 (256)
T d1lv7a_ 222 ANLVNEAALF 231 (256)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
T ss_conf 9999999999
No 11
>d1e32a2 c.37.1.20 (A:201-458) Membrane fusion ATPase VCP/p97 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.93 E-value=1e-24 Score=183.71 Aligned_cols=198 Identities=26% Similarity=0.360 Sum_probs=156.2
Q ss_pred CCCCCCCCHHHHHHHHHHHH-------------CCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEC
Q ss_conf 99876688899999999970-------------39999807888999719999999999975599999889966999865
Q 005511 40 KLDPVVGRQPQIERVVQILG-------------RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDM 106 (693)
Q Consensus 40 ~~~~ivG~~~~~~~l~~~l~-------------~~~~~~ilL~GppGtGKT~la~~la~~l~~~~~~~~~~~~~~~~~~~ 106 (693)
+|++++|.+.+++.+.+.+. .++++++|||||||||||++++++|+++ +.+++.+++
T Consensus 2 ~~~dv~G~~~~k~~l~~~i~~~l~~~~~~~~~g~~~~~giLL~GppGtGKT~l~~ala~~~----------~~~~~~i~~ 71 (258)
T d1e32a2 2 GYDDVGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANET----------GAFFFLING 71 (258)
T ss_dssp CGGGCCSCSHHHHHHHHHHHHHHHCHHHHHHCCCCCCCEEEEECCTTSSHHHHHHHHHHHT----------TCEEEEECH
T ss_pred CHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHH----------CCEEEEEEC
T ss_conf 7666310999999999999988319999986799988646876699888308999999874----------883799973
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHCCCC---CCHHHHHHHHHHHH----CCCCCEEEEEECH
Q ss_conf 2101397446618999999999997089849999160033108999---88476999883311----0798179997435
Q 005511 107 GLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAA---EGAIDAANILKPSL----ARGELQCIGATTL 179 (693)
Q Consensus 107 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~iL~iDEid~l~~~~~~---~~~~~~~~~L~~~l----~~~~i~iI~~t~~ 179 (693)
+.+. ..+.|.....++.+|..+....|+||||||+|.+++.+.. .......+.+...+ ....+.+|++||.
T Consensus 72 ~~l~--~~~~g~~~~~l~~~f~~A~~~~p~il~iDeid~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvi~tTn~ 149 (258)
T d1e32a2 72 PEIM--SKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNR 149 (258)
T ss_dssp HHHT--TSCTTHHHHHHHHHHHHHHHTCSEEEEESSGGGTCCHHHHCCCTTHHHHHHHHHHHHHTCCCSSCEEEEEEESC
T ss_pred HHHC--CCCCCCHHHHHHHHHHHHHHCCCEEEEEHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCEEEECCC
T ss_conf 0430--25456178888999999986499499852111322578877770689998775001101234688117975799
Q ss_pred HHHHHHHHCCHHHHC--CCC-CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHH
Q ss_conf 889854203988854--678-31158999999999999999967220376668589999998644410046770346669
Q 005511 180 DEYRKHIEKDPALER--RFQ-PVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDL 256 (693)
Q Consensus 180 ~~~~~~~~l~~~l~~--Rf~-~i~~~~p~~~e~~~il~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~a~~~ 256 (693)
+. .+|+++++ ||+ .++|+.|+.++|..|++.++... ... .+..+..++..+.||.+ ++...+
T Consensus 150 ~~-----~ld~al~r~gRfd~~i~~~~P~~~~R~~il~~~l~~~----~~~-~~~~~~~la~~t~G~s~-----adl~~l 214 (258)
T d1e32a2 150 PN-----SIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNM----KLA-DDVDLEQVANETHGHVG-----ADLAAL 214 (258)
T ss_dssp GG-----GSCGGGTSTTSSCEEEECCCCCHHHHHHHHHHTTTTS----CBC-TTCCHHHHHHHCTTCCH-----HHHHHH
T ss_pred CC-----CCCHHHHHCCCCCCEEECCCCCHHHHHHHHHHHCCCC----CCC-CCCCHHHHHHCCCCCCH-----HHHHHH
T ss_conf 31-----0252454246302323789999889998732204576----334-55303444420667789-----999999
Q ss_pred HHHHHHHH
Q ss_conf 99875688
Q 005511 257 IDEAGSRV 264 (693)
Q Consensus 257 l~~a~~~~ 264 (693)
++.|+..+
T Consensus 215 v~~A~~~a 222 (258)
T d1e32a2 215 CSEAALQA 222 (258)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
T ss_conf 99999999
No 12
>d1iqpa2 c.37.1.20 (A:2-232) Replication factor C {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=99.91 E-value=3.5e-23 Score=173.11 Aligned_cols=208 Identities=18% Similarity=0.264 Sum_probs=159.5
Q ss_pred CCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEE
Q ss_conf 74188887436654320999876688899999999970399998078889997199999999999755999998899669
Q 005511 22 MPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKV 101 (693)
Q Consensus 22 ~~~l~~~~~~l~~~~~~~~~~~ivG~~~~~~~l~~~l~~~~~~~ilL~GppGtGKT~la~~la~~l~~~~~~~~~~~~~~ 101 (693)
+.-...+.++|+++|+|.++++++|+++.++.+..++.....+++||+||||+|||++|+++|+++.+.. ....+
T Consensus 4 ~~~~~~~~~~w~~ky~P~~~~diig~~~~~~~l~~~i~~~~~~~lll~Gp~G~GKTtla~~iak~l~~~~-----~~~~~ 78 (231)
T d1iqpa2 4 IREVKVLEKPWVEKYRPQRLDDIVGQEHIVKRLKHYVKTGSMPHLLFAGPPGVGKTTAALALARELFGEN-----WRHNF 78 (231)
T ss_dssp CHHHHHTTSCHHHHTCCCSTTTCCSCHHHHHHHHHHHHHTCCCEEEEESCTTSSHHHHHHHHHHHHHGGG-----HHHHE
T ss_pred HHHHHHHHCHHHHHHCCCCHHHCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCC-----CCCCE
T ss_conf 4666654243789758998999139399999999999859997699978999748799999999987314-----67771
Q ss_pred EEEECCCCCCCCCCCCHHHHHHHHHHHH--HHHCCCEEEEEECCCHHHHCCCCCCHHHHHHHHHHHHC--CCCCEEEEEE
Q ss_conf 9986521013974466189999999999--97089849999160033108999884769998833110--7981799974
Q 005511 102 ITLDMGLLVAGTKYRGEFEERLKKLMEE--IKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLA--RGELQCIGAT 177 (693)
Q Consensus 102 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~--~~~~~~~iL~iDEid~l~~~~~~~~~~~~~~~L~~~l~--~~~i~iI~~t 177 (693)
++++++..... ............. .....+.++++||+|.+... .++.|+..++ ...+.+|+++
T Consensus 79 ~e~n~s~~~~~----~~~~~~~~~~~~~~~~~~~~~~iilide~d~~~~~--------~~~~ll~~l~~~~~~~~~i~~~ 146 (231)
T d1iqpa2 79 LELNASDERGI----NVIREKVKEFARTKPIGGASFKIIFLDEADALTQD--------AQQALRRTMEMFSSNVRFILSC 146 (231)
T ss_dssp EEEETTCHHHH----HTTHHHHHHHHHSCCGGGCSCEEEEEETGGGSCHH--------HHHHHHHHHHHTTTTEEEEEEE
T ss_pred EEEECCCCCCH----HHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHCCHH--------HHHHHHHHCCCCCCCEEEEECC
T ss_conf 58756766663----48888888887510015787228861434431214--------7898764112477644788614
Q ss_pred CHHHHHHHHHCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHH
Q ss_conf 35889854203988854678311589999999999999999672203766685899999986444100467703466699
Q 005511 178 TLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLI 257 (693)
Q Consensus 178 ~~~~~~~~~~l~~~l~~Rf~~i~~~~p~~~e~~~il~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~a~~~l 257 (693)
|... .+++++++||..+.|++|+..+...+++..+.+ .++.++++++..+++.+.|.+ |.++..|
T Consensus 147 n~~~-----~i~~~l~sR~~~i~~~~~~~~~~~~~l~~~~~~----e~i~i~~~~l~~I~~~~~gdi------R~ai~~L 211 (231)
T d1iqpa2 147 NYSS-----KIIEPIQSRCAIFRFRPLRDEDIAKRLRYIAEN----EGLELTEEGLQAILYIAEGDM------RRAINIL 211 (231)
T ss_dssp SCGG-----GSCHHHHHTEEEEECCCCCHHHHHHHHHHHHHT----TTCEECHHHHHHHHHHHTTCH------HHHHHHH
T ss_pred CCHH-----HCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHH----HCCCCCHHHHHHHHHHCCCCH------HHHHHHH
T ss_conf 8766-----565768473121012334304677899888998----399989999999999839979------9999999
Q ss_pred HHHH
Q ss_conf 9875
Q 005511 258 DEAG 261 (693)
Q Consensus 258 ~~a~ 261 (693)
+.+.
T Consensus 212 q~~~ 215 (231)
T d1iqpa2 212 QAAA 215 (231)
T ss_dssp HHHH
T ss_pred HHHH
T ss_conf 9999
No 13
>d1r7ra3 c.37.1.20 (A:471-735) Membrane fusion ATPase VCP/p97 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.90 E-value=4.2e-24 Score=179.46 Aligned_cols=200 Identities=21% Similarity=0.347 Sum_probs=155.1
Q ss_pred CCCCCCCCCHHHHHHHHHHH-------------HCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEE
Q ss_conf 99987668889999999997-------------03999980788899971999999999997559999988996699986
Q 005511 39 GKLDPVVGRQPQIERVVQIL-------------GRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLD 105 (693)
Q Consensus 39 ~~~~~ivG~~~~~~~l~~~l-------------~~~~~~~ilL~GppGtGKT~la~~la~~l~~~~~~~~~~~~~~~~~~ 105 (693)
.+|++++|.+++++++.+.+ ..+.+.++|||||||||||++++++|.++ +.++++++
T Consensus 4 ~~f~di~G~~~~k~~l~~~i~~~l~~~~~~~~~g~~~~~giLL~Gp~GtGKT~l~~ala~~~----------~~~~~~~~ 73 (265)
T d1r7ra3 4 VTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANEC----------QANFISIK 73 (265)
T ss_dssp CSCSSCSSSSCCCCHHHHHTHHHHHCHHHHHHCCCCCCCEEEEBCCTTSSHHHHHHHHHHHT----------TCEEEEEC
T ss_pred CCHHHHCCHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHH----------CCCEEEEE
T ss_conf 98999667899999999999999639999986799988757887899876304778878771----------89479988
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHCCC---CCCHH---HHHHHHHHHH----CCCCCEEEE
Q ss_conf 5210139744661899999999999708984999916003310899---98847---6999883311----079817999
Q 005511 106 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGA---AEGAI---DAANILKPSL----ARGELQCIG 175 (693)
Q Consensus 106 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~iL~iDEid~l~~~~~---~~~~~---~~~~~L~~~l----~~~~i~iI~ 175 (693)
++.+. ..+.|..+..++.+|..+....|++|+|||+|.++..+. ..... ...+.|+..+ +...+++|+
T Consensus 74 ~~~l~--~~~~~~~~~~l~~~f~~A~~~~p~il~ideid~l~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~v~vi~ 151 (265)
T d1r7ra3 74 GPELL--TMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIG 151 (265)
T ss_dssp HHHHH--TSCTTTHHHHHHHHHHHHHHTCSEEEEESSGGGTCCHHHHCCCTTHHHHHHHHHHHHHTCC------CCEEEE
T ss_pred HHHHH--HCCCCCHHHHHHHHHHHHHHCCCCCEEHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEE
T ss_conf 79952--5316515899999999998639843568754632455787678873799999999999962867779989999
Q ss_pred EECHHHHHHHHHCCHHHHC--CCC-CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCHH
Q ss_conf 7435889854203988854--678-3115899999999999999996722037666858999999864441004677034
Q 005511 176 ATTLDEYRKHIEKDPALER--RFQ-PVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDK 252 (693)
Q Consensus 176 ~t~~~~~~~~~~l~~~l~~--Rf~-~i~~~~p~~~e~~~il~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~ 252 (693)
+||.++ .+|+++++ ||+ .+.|+.|+.++|.+||+.++.+.... .+..+..++..+.||.+ ++
T Consensus 152 ttn~~~-----~ld~al~r~gRf~~~i~~~~p~~~~R~~il~~~l~~~~~~-----~~~~l~~la~~t~g~s~-----~d 216 (265)
T d1r7ra3 152 ATNRPD-----IIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVA-----KDVDLEFLAKMTNGFSG-----AD 216 (265)
T ss_dssp CCBSCT-----TTSCGGGSSTTSEEEEECCCCCCHHHHHHHHHHTTCC---------CCCCHHHHHHHCSSCC-----HH
T ss_pred ECCCCH-----HCCHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHCCCCCH-----HHHHHHHHHHCCCCCCH-----HH
T ss_conf 179922-----2799780787764799956607888999999996057710-----24368999825899999-----99
Q ss_pred HHHHHHHHHHHHH
Q ss_conf 6669998756888
Q 005511 253 AIDLIDEAGSRVR 265 (693)
Q Consensus 253 a~~~l~~a~~~~~ 265 (693)
...+++.|...+.
T Consensus 217 i~~lv~~A~~~A~ 229 (265)
T d1r7ra3 217 LTEICQRACKLAI 229 (265)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
T ss_conf 9999999999999
No 14
>d1njfa_ c.37.1.20 (A:) delta prime subunit of DNA polymerase III, N-domain {Escherichia coli [TaxId: 562]}
Probab=99.90 E-value=5.9e-22 Score=164.68 Aligned_cols=200 Identities=21% Similarity=0.204 Sum_probs=153.3
Q ss_pred HHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCC-EEEECCCCCHHHHHHHHHHHHHHCCCCCCCCC-------------
Q ss_conf 6654320999876688899999999970399998-07888999719999999999975599999889-------------
Q 005511 32 LTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNN-PCLIGEPGVGKTAIAEGLAQRIASGDVPDTIE------------- 97 (693)
Q Consensus 32 l~~~~~~~~~~~ivG~~~~~~~l~~~l~~~~~~~-ilL~GppGtGKT~la~~la~~l~~~~~~~~~~------------- 97 (693)
|+++|||.+|++++|+++.++.+..++.....++ +||+||||+|||++|+.+++.+.+........
T Consensus 2 ~~~KyrP~~~~dlig~~~~~~~L~~~i~~~~~~~~~Ll~Gp~G~GKtt~a~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~ 81 (239)
T d1njfa_ 2 LARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGLNCETGITATPCGVCDNCREIEQG 81 (239)
T ss_dssp HHHHTCCSSGGGSCSCHHHHHHHHHHHHTTCCCSEEEEECSTTSSHHHHHHHHHHHHHCTTCSCSSCCSCSHHHHHHHHT
T ss_pred CHHHHCCCCHHHCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCC
T ss_conf 51432889898815959999999999985998705988889987589999999998468556666755542479999747
Q ss_pred -CCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHH----HCCCEEEEEECCCHHHHCCCCCCHHHHHHHHHHHHCC--CC
Q ss_conf -9669998652101397446618999999999997----0898499991600331089998847699988331107--98
Q 005511 98 -GKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIK----QSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLAR--GE 170 (693)
Q Consensus 98 -~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~----~~~~~iL~iDEid~l~~~~~~~~~~~~~~~L~~~l~~--~~ 170 (693)
...+++++.+... ....++.+++.+. .+...+++|||+|.+. ...++.|++.++. ..
T Consensus 82 ~~~~~~~~~~~~~~--------~i~~ir~~~~~~~~~~~~~~~kviiIde~d~l~--------~~~q~~Llk~lE~~~~~ 145 (239)
T d1njfa_ 82 RFVDLIEIDAASRT--------KVEDTRDLLDNVQYAPARGRFKVYLIDEVHMLS--------RHSFNALLKTLEEPPEH 145 (239)
T ss_dssp CCTTEEEEETTCSS--------SHHHHHHHHHSCCCSCSSSSSEEEEEETGGGSC--------HHHHHHHHHHHHSCCTT
T ss_pred CCCEEEEECCHHCC--------CHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCC--------HHHHHHHHHHHHCCCCC
T ss_conf 98707996112007--------899999999999746525998799997811089--------99999999998568988
Q ss_pred CEEEEEECHHHHHHHHHCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 17999743588985420398885467831158999999999999999967220376668589999998644410046770
Q 005511 171 LQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLP 250 (693)
Q Consensus 171 i~iI~~t~~~~~~~~~~l~~~l~~Rf~~i~~~~p~~~e~~~il~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~ 250 (693)
..+|++||... .+.++++|||..+.|++|+.++...++...+.. .+..+++++++.++..+.|. .
T Consensus 146 ~~~il~tn~~~-----~i~~~i~SRc~~i~~~~~~~~~i~~~l~~i~~~----e~~~~~~~~l~~i~~~s~Gd------~ 210 (239)
T d1njfa_ 146 VKFLLATTDPQ-----KLPVTILSRCLQFHLKALDVEQIRHQLEHILNE----EHIAHEPRALQLLARAAEGS------L 210 (239)
T ss_dssp EEEEEEESCGG-----GSCHHHHTTSEEEECCCCCHHHHHHHHHHHHHH----HTCCBCHHHHHHHHHHTTTC------H
T ss_pred EEEEEECCCCC-----CCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH----HCCCCCHHHHHHHHHHCCCC------H
T ss_conf 69999738856-----367657612102222467678766688787764----31478999999999976997------9
Q ss_pred HHHHHHHHHHHH
Q ss_conf 346669998756
Q 005511 251 DKAIDLIDEAGS 262 (693)
Q Consensus 251 ~~a~~~l~~a~~ 262 (693)
|.|+.+++.+.+
T Consensus 211 R~ain~l~~~~~ 222 (239)
T d1njfa_ 211 RDALSLTDQAIA 222 (239)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
T ss_conf 999999999998
No 15
>d1sxjb2 c.37.1.20 (B:7-230) Replication factor C4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.90 E-value=3.7e-23 Score=172.99 Aligned_cols=198 Identities=16% Similarity=0.234 Sum_probs=153.8
Q ss_pred HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCC
Q ss_conf 74366543209998766888999999999703999980788899971999999999997559999988996699986521
Q 005511 29 GTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGL 108 (693)
Q Consensus 29 ~~~l~~~~~~~~~~~ivG~~~~~~~l~~~l~~~~~~~ilL~GppGtGKT~la~~la~~l~~~~~~~~~~~~~~~~~~~~~ 108 (693)
.-||+++|||.++++++|+++.++.+..++.....+++||+||||+|||++|+.+++.+.+... ...++.++.++
T Consensus 2 ~~pw~eKyrP~~~~d~ig~~~~~~~L~~~~~~~~~~~~ll~Gp~G~GKTt~a~~la~~l~~~~~-----~~~~~~~n~~~ 76 (224)
T d1sxjb2 2 QLPWVEKYRPQVLSDIVGNKETIDRLQQIAKDGNMPHMIISGMPGIGKTTSVHCLAHELLGRSY-----ADGVLELNASD 76 (224)
T ss_dssp CCCHHHHTCCSSGGGCCSCTHHHHHHHHHHHSCCCCCEEEECSTTSSHHHHHHHHHHHHHGGGH-----HHHEEEECTTS
T ss_pred CCCHHHHHCCCCHHHHCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCC-----CCCCCCCCCCC
T ss_conf 9835767388989990297999999999998699874999889998705469999999725664-----32211111345
Q ss_pred CCCCCCCCCHHHHHHHHHHHHH-H------HCCCEEEEEECCCHHHHCCCCCCHHHHHHHHHHHHCC--CCCEEEEEECH
Q ss_conf 0139744661899999999999-7------0898499991600331089998847699988331107--98179997435
Q 005511 109 LVAGTKYRGEFEERLKKLMEEI-K------QSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLAR--GELQCIGATTL 179 (693)
Q Consensus 109 ~~~~~~~~g~~~~~~~~~~~~~-~------~~~~~iL~iDEid~l~~~~~~~~~~~~~~~L~~~l~~--~~i~iI~~t~~ 179 (693)
.. +. ..+...+... . .....++++||+|.+... .++.|+..++. ....++++++.
T Consensus 77 ~~------~~--~~i~~~~~~~~~~~~~~~~~~~kviiiDe~d~~~~~--------~~~~ll~~~e~~~~~~~~i~~~~~ 140 (224)
T d1sxjb2 77 DR------GI--DVVRNQIKHFAQKKLHLPPGKHKIVILDEADSMTAG--------AQQALRRTMELYSNSTRFAFACNQ 140 (224)
T ss_dssp CC------SH--HHHHTHHHHHHHBCCCCCTTCCEEEEEESGGGSCHH--------HHHTTHHHHHHTTTTEEEEEEESC
T ss_pred CC------CC--EEHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCHH--------HHHHHHHHCCCCCCCEEEEECCCC
T ss_conf 57------85--211667887887622477763599998244323215--------778775201123333366531474
Q ss_pred HHHHHHHHCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
Q ss_conf 88985420398885467831158999999999999999967220376668589999998644410046770346669998
Q 005511 180 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDE 259 (693)
Q Consensus 180 ~~~~~~~~l~~~l~~Rf~~i~~~~p~~~e~~~il~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~a~~~l~~ 259 (693)
.. .+.++++|||..+.|++|+.++...++...+.+ +++.++++++..++..+.|.+ |.|+..|+.
T Consensus 141 ~~-----~i~~~l~sr~~~i~~~~~~~~~i~~~l~~i~~~----e~~~i~~~~l~~I~~~s~Gd~------R~ai~~Lq~ 205 (224)
T d1sxjb2 141 SN-----KIIEPLQSQCAILRYSKLSDEDVLKRLLQIIKL----EDVKYTNDGLEAIIFTAEGDM------RQAINNLQS 205 (224)
T ss_dssp GG-----GSCHHHHTTSEEEECCCCCHHHHHHHHHHHHHH----HTCCBCHHHHHHHHHHHTTCH------HHHHHHHHH
T ss_pred HH-----HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH----CCCCCCHHHHHHHHHHCCCCH------HHHHHHHHH
T ss_conf 30-----210678877777653133224567888777774----046789999999999869969------999999999
Q ss_pred HHH
Q ss_conf 756
Q 005511 260 AGS 262 (693)
Q Consensus 260 a~~ 262 (693)
+..
T Consensus 206 ~~~ 208 (224)
T d1sxjb2 206 TVA 208 (224)
T ss_dssp HHH
T ss_pred HHH
T ss_conf 997
No 16
>d1in4a2 c.37.1.20 (A:17-254) Holliday junction helicase RuvB {Thermotoga maritima [TaxId: 2336]}
Probab=99.89 E-value=2.7e-21 Score=160.14 Aligned_cols=191 Identities=23% Similarity=0.294 Sum_probs=143.9
Q ss_pred HHHHCCCCCCCCCCHHHHHHHHHHHHC-----CCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCC
Q ss_conf 543209998766888999999999703-----999980788899971999999999997559999988996699986521
Q 005511 34 KLAEEGKLDPVVGRQPQIERVVQILGR-----RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGL 108 (693)
Q Consensus 34 ~~~~~~~~~~ivG~~~~~~~l~~~l~~-----~~~~~ilL~GppGtGKT~la~~la~~l~~~~~~~~~~~~~~~~~~~~~ 108 (693)
+.+||++|++++|++++++.+..++.. ...+++|||||||||||++|+++|+++ +.+++.++.+.
T Consensus 1 ~~~RP~~~~divGqe~~~~~l~~~i~~~~~~~~~~~~~L~~GPpGtGKT~lA~~la~~~----------~~~~~~~~~~~ 70 (238)
T d1in4a2 1 QFLRPKSLDEFIGQENVKKKLSLALEAAKMRGEVLDHVLLAGPPGLGKTTLAHIIASEL----------QTNIHVTSGPV 70 (238)
T ss_dssp CTTSCSSGGGCCSCHHHHHHHHHHHHHHHHHTCCCCCEEEESSTTSSHHHHHHHHHHHH----------TCCEEEEETTT
T ss_pred CCCCCCCHHHCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHCC----------CCCCCCCCCCC
T ss_conf 99798929990895999999999999788538877748987999973889999998503----------88853325744
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHCCCCCCHHHHHHHHHHHHCC--------------------
Q ss_conf 013974466189999999999970898499991600331089998847699988331107--------------------
Q 005511 109 LVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLAR-------------------- 168 (693)
Q Consensus 109 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~iL~iDEid~l~~~~~~~~~~~~~~~L~~~l~~-------------------- 168 (693)
.. ....+...+.. ...+.++++||+|.+.+. .++.+...++.
T Consensus 71 ~~--------~~~~~~~~~~~--~~~~~~~~ide~~~~~~~--------~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 (238)
T d1in4a2 71 LV--------KQGDMAAILTS--LERGDVLFIDEIHRLNKA--------VEELLYSAIEDFQIDIMIGKGPSAKSIRIDI 132 (238)
T ss_dssp CC--------SHHHHHHHHHH--CCTTCEEEEETGGGCCHH--------HHHHHHHHHHTSCCCC---------------
T ss_pred CC--------CHHHHHHHHHH--HCCCCCHHHHHHHHHHHH--------HHHHCCCCEEEEEEEEEECCCCCCCCCCCCC
T ss_conf 22--------48889999875--435882477789884067--------7764214024414544543760024444578
Q ss_pred CCCEEEEEECHHHHHHHHHCCHHHHCCCC-CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCC
Q ss_conf 98179997435889854203988854678-31158999999999999999967220376668589999998644410046
Q 005511 169 GELQCIGATTLDEYRKHIEKDPALERRFQ-PVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDR 247 (693)
Q Consensus 169 ~~i~iI~~t~~~~~~~~~~l~~~l~~Rf~-~i~~~~p~~~e~~~il~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~ 247 (693)
..+++|++||... ..++++++||. .+.|+.|+.+++..+++..+.. .+..++++++..++..+.+.
T Consensus 133 ~~~~~I~at~~~~-----~~~~~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~----~~~~~~~~~l~~i~~~s~gd---- 199 (238)
T d1in4a2 133 QPFTLVGATTRSG-----LLSSPLRSRFGIILELDFYTVKELKEIIKRAASL----MDVEIEDAAAEMIAKRSRGT---- 199 (238)
T ss_dssp CCCEEEEEESCGG-----GSCHHHHTTCSEEEECCCCCHHHHHHHHHHHHHH----TTCCBCHHHHHHHHHTSTTC----
T ss_pred CCEEEEEECCCCC-----CCCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHH----CCCHHHHHHHHHHHHHCCCC----
T ss_conf 8769999547875-----5554311330079984478778777777776530----11002579999999967998----
Q ss_pred CCCHHHHHHHHHHHHHHHHH
Q ss_conf 77034666999875688884
Q 005511 248 FLPDKAIDLIDEAGSRVRLR 267 (693)
Q Consensus 248 ~~~~~a~~~l~~a~~~~~~~ 267 (693)
.|.++.+++.+...+...
T Consensus 200 --~R~ai~~l~~~~~~~~~~ 217 (238)
T d1in4a2 200 --PRIAIRLTKRVRDMLTVV 217 (238)
T ss_dssp --HHHHHHHHHHHHHHHHHH
T ss_pred --HHHHHHHHHHHHHHHHHH
T ss_conf --999999999999999985
No 17
>d1sxjc2 c.37.1.20 (C:12-238) Replication factor C3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.89 E-value=6.5e-23 Score=171.27 Aligned_cols=197 Identities=17% Similarity=0.234 Sum_probs=150.7
Q ss_pred HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCC
Q ss_conf 43665432099987668889999999997039999807888999719999999999975599999889966999865210
Q 005511 30 TNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLL 109 (693)
Q Consensus 30 ~~l~~~~~~~~~~~ivG~~~~~~~l~~~l~~~~~~~ilL~GppGtGKT~la~~la~~l~~~~~~~~~~~~~~~~~~~~~~ 109 (693)
.||+++|||+++++++|+++.++.+..++.....+++||+||||+|||++++++|+++.+... ...++..+.+..
T Consensus 2 ~pw~ekyrP~~~~divg~~~~~~~L~~~i~~~~~~~lLl~Gp~G~GKttl~~~la~~l~~~~~-----~~~~~e~~~~~~ 76 (227)
T d1sxjc2 2 LPWVEKYRPETLDEVYGQNEVITTVRKFVDEGKLPHLLFYGPPGTGKTSTIVALAREIYGKNY-----SNMVLELNASDD 76 (227)
T ss_dssp CCHHHHTCCSSGGGCCSCHHHHHHHHHHHHTTCCCCEEEECSSSSSHHHHHHHHHHHHHTTSH-----HHHEEEECTTSC
T ss_pred CCHHHHHCCCCHHHCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCC-----CCEEEEECCCCC
T ss_conf 755454588999983596999999999997699985999889987755899999998516777-----641577315556
Q ss_pred CCCCCCCCHHHHHHHHHHHHH------HHCCCEEEEEECCCHHHHCCCCCCHHHHHHHHHHHHCC--CCCEEEEEECHHH
Q ss_conf 139744661899999999999------70898499991600331089998847699988331107--9817999743588
Q 005511 110 VAGTKYRGEFEERLKKLMEEI------KQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLAR--GELQCIGATTLDE 181 (693)
Q Consensus 110 ~~~~~~~g~~~~~~~~~~~~~------~~~~~~iL~iDEid~l~~~~~~~~~~~~~~~L~~~l~~--~~i~iI~~t~~~~ 181 (693)
. +. .......... ......+++|||+|.+... .++.|+..++. ....++++++...
T Consensus 77 ~------~~--~~~~~~~~~~~~~~~~~~~~~kiiiiDe~d~~~~~--------~~~~Ll~~le~~~~~~~~~~~~~~~~ 140 (227)
T d1sxjc2 77 R------GI--DVVRNQIKDFASTRQIFSKGFKLIILDEADAMTNA--------AQNALRRVIERYTKNTRFCVLANYAH 140 (227)
T ss_dssp C------SH--HHHHTHHHHHHHBCCSSSCSCEEEEETTGGGSCHH--------HHHHHHHHHHHTTTTEEEEEEESCGG
T ss_pred C------CE--EEEECCHHHCCCCCCCCCCCEEEEEEECCCCCHHH--------HHHHHHHHHHHCCCCEEECCCCCCHH
T ss_conf 8------75--43210001011100025777189999663200023--------78999988631120023201267087
Q ss_pred HHHHHHCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
Q ss_conf 98542039888546783115899999999999999996722037666858999999864441004677034666999875
Q 005511 182 YRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAG 261 (693)
Q Consensus 182 ~~~~~~l~~~l~~Rf~~i~~~~p~~~e~~~il~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~a~~~l~~a~ 261 (693)
.+.+++++||..+.|++|+.++...++...+.. .++.+++++++.+++.+.|.+ |.|+..|+.+.
T Consensus 141 -----~i~~~i~sr~~~i~~~~~~~~~i~~~l~~I~~~----e~i~i~~~~l~~i~~~s~Gd~------R~ain~Lq~~~ 205 (227)
T d1sxjc2 141 -----KLTPALLSQCTRFRFQPLPQEAIERRIANVLVH----EKLKLSPNAEKALIELSNGDM------RRVLNVLQSCK 205 (227)
T ss_dssp -----GSCHHHHTTSEEEECCCCCHHHHHHHHHHHHHT----TTCCBCHHHHHHHHHHHTTCH------HHHHHHTTTTT
T ss_pred -----HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC----CCCCCCHHHHHHHHHHCCCCH------HHHHHHHHHHH
T ss_conf -----759999988754012356520001102122111----124589899999999849969------99999999999
Q ss_pred H
Q ss_conf 6
Q 005511 262 S 262 (693)
Q Consensus 262 ~ 262 (693)
.
T Consensus 206 ~ 206 (227)
T d1sxjc2 206 A 206 (227)
T ss_dssp T
T ss_pred H
T ss_conf 8
No 18
>d1sxjd2 c.37.1.20 (D:26-262) Replication factor C2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.89 E-value=5e-22 Score=165.15 Aligned_cols=207 Identities=15% Similarity=0.194 Sum_probs=150.0
Q ss_pred HHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCC
Q ss_conf 36654320999876688899999999970399998078889997199999999999755999998899669998652101
Q 005511 31 NLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLV 110 (693)
Q Consensus 31 ~l~~~~~~~~~~~ivG~~~~~~~l~~~l~~~~~~~ilL~GppGtGKT~la~~la~~l~~~~~~~~~~~~~~~~~~~~~~~ 110 (693)
||+++|+|.+|++++|+++.++.+..++.....++++|+||||+|||++++++++++..... .....+.++.+...
T Consensus 1 ~w~~ky~P~~~~diig~~~~~~~l~~~i~~~~~~~lll~Gp~G~GKTtl~~~i~~~l~~~~~----~~~~~~~~~~~~~~ 76 (237)
T d1sxjd2 1 PWVEKYRPKNLDEVTAQDHAVTVLKKTLKSANLPHMLFYGPPGTGKTSTILALTKELYGPDL----MKSRILELNASDER 76 (237)
T ss_dssp CHHHHTCCSSTTTCCSCCTTHHHHHHHTTCTTCCCEEEECSTTSSHHHHHHHHHHHHHHHHH----HTTSEEEECSSSCC
T ss_pred CCCHHHCCCCHHHCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCC----CCCCHHHEECCCCC
T ss_conf 90132088978872693999999999998699885999899999849999999999709763----34321220021135
Q ss_pred CCCCCCCHHHHHHH---------HHHHHHHHCCCEEEEEECCCHHHHCCCCCCHHHHHHHHHHHHC--CCCCEEEEEECH
Q ss_conf 39744661899999---------9999997089849999160033108999884769998833110--798179997435
Q 005511 111 AGTKYRGEFEERLK---------KLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLA--RGELQCIGATTL 179 (693)
Q Consensus 111 ~~~~~~g~~~~~~~---------~~~~~~~~~~~~iL~iDEid~l~~~~~~~~~~~~~~~L~~~l~--~~~i~iI~~t~~ 179 (693)
. ............ ............+++|||+|.+... ..+.+...++ .....+|.+++.
T Consensus 77 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~viiiDe~d~l~~~--------~~~~l~~~~~~~~~~~~~i~~~~~ 147 (237)
T d1sxjd2 77 G-ISIVREKVKNFARLTVSKPSKHDLENYPCPPYKIIILDEADSMTAD--------AQSALRRTMETYSGVTRFCLICNY 147 (237)
T ss_dssp C-HHHHTTHHHHHHHSCCCCCCTTHHHHSCCCSCEEEEETTGGGSCHH--------HHHHHHHHHHHTTTTEEEEEEESC
T ss_pred C-CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHH--------HHHHHHHCCCCCCCCCCCCCCCCC
T ss_conf 6-0678999988765444324678776135667369999551336777--------788876301222233332122466
Q ss_pred HHHHHHHHCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
Q ss_conf 88985420398885467831158999999999999999967220376668589999998644410046770346669998
Q 005511 180 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDE 259 (693)
Q Consensus 180 ~~~~~~~~l~~~l~~Rf~~i~~~~p~~~e~~~il~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~a~~~l~~ 259 (693)
.. .+.+++++||..+.|++|+.++...+++..+.+ +++.++++++..++..+.|.+ |.++..|+.
T Consensus 148 ~~-----~~~~~l~sr~~~i~f~~~~~~~~~~~L~~i~~~----e~i~i~~~~l~~ia~~s~gd~------R~ai~~L~~ 212 (237)
T d1sxjd2 148 VT-----RIIDPLASQCSKFRFKALDASNAIDRLRFISEQ----ENVKCDDGVLERILDISAGDL------RRGITLLQS 212 (237)
T ss_dssp GG-----GSCHHHHHHSEEEECCCCCHHHHHHHHHHHHHT----TTCCCCHHHHHHHHHHTSSCH------HHHHHHHHH
T ss_pred CC-----CCCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHH----HCCCCCHHHHHHHHHHCCCCH------HHHHHHHHH
T ss_conf 42-----223311100011023333332110010114555----267578999999999859989------999999999
Q ss_pred HHHHHH
Q ss_conf 756888
Q 005511 260 AGSRVR 265 (693)
Q Consensus 260 a~~~~~ 265 (693)
++..+.
T Consensus 213 ~~~~~~ 218 (237)
T d1sxjd2 213 ASKGAQ 218 (237)
T ss_dssp THHHHH
T ss_pred HHHHCH
T ss_conf 997363
No 19
>d1ny5a2 c.37.1.20 (A:138-384) Transcriptional activator sigm54 (NtrC1), C-terminal domain {Aquifex aeolicus [TaxId: 63363]}
Probab=99.88 E-value=2.3e-20 Score=153.72 Aligned_cols=228 Identities=18% Similarity=0.243 Sum_probs=174.0
Q ss_pred CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHCC
Q ss_conf 52693899999999999975027899998438999515889279999999999639975405533543221000110028
Q 005511 377 RVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIG 456 (693)
Q Consensus 377 ~i~Gq~~~i~~l~~~i~~~~~~~~~~~~~~~~ill~Gp~GtGKt~lA~~la~~l~~~~~~~~~~~~~~~~~~~~~~~l~g 456 (693)
++||++.+++.+.+.+++.... . .++++.||+||||+.+|+.++........+++.++|..+........++|
T Consensus 1 ~~v~~S~~~~~~~~~~~~~a~~-~------~pvlI~Ge~GtGK~~~A~~ih~~s~~~~~~~~~~~~~~~~~~~~~~~lfg 73 (247)
T d1ny5a2 1 EYVFESPKMKEILEKIKKISCA-E------CPVLITGESGVGKEVVARLIHKLSDRSKEPFVALNVASIPRDIFEAELFG 73 (247)
T ss_dssp CCCCCSHHHHHHHHHHHHHTTC-C------SCEEEECSTTSSHHHHHHHHHHHSTTTTSCEEEEETTTSCHHHHHHHHHC
T ss_pred CEEECCHHHHHHHHHHHHHHCC-C------CCEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCHHHHCC
T ss_conf 9586299999999999999688-9------97899899981799999999996587653320210234310112887628
Q ss_pred CCCCCCCCCCCCHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHCCEEECCCCCEEECCCEEEEEECCCCHHHHHHC
Q ss_conf 99987676751226699980999899984674229889999999740564637999833169769999538882566406
Q 005511 457 SPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKG 536 (693)
Q Consensus 457 ~~~~~~g~~~~~~l~~~~~~~~~~vl~iDEid~l~~~~~~~Ll~~le~g~~~~~~~~~~~~~~~i~I~tsn~~~~~i~~~ 536 (693)
...+...... ....+.+..+.++.|||||+|.+++..|..|+..++++.+....+......++.+|++|+.....+...
T Consensus 74 ~~~~~~~~~~-~~~~g~l~~a~gGtL~l~~i~~L~~~~Q~~L~~~l~~~~~~~~~~~~~~~~~~RlI~~s~~~l~~l~~~ 152 (247)
T d1ny5a2 74 YEKGAFTGAV-SSKEGFFELADGGTLFLDEIGELSLEAQAKLLRVIESGKFYRLGGRKEIEVNVRILAATNRNIKELVKE 152 (247)
T ss_dssp BCTTSSTTCC-SCBCCHHHHTTTSEEEEESGGGCCHHHHHHHHHHHHHSEECCBTCCSBEECCCEEEEEESSCHHHHHHT
T ss_pred CCCCCCCCCC-CCCCCHHHCCCCCEEEEECHHHCCHHHHHHHHHHHHHCCEEECCCCCCEECCEEEEEECCCCHHHHHHC
T ss_conf 5357767753-355888772389979995837599999999999997598787899970233759999339799999885
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHCCCCE-EECCCC--CHHHHHHHHHHHHHHHHHHHHCCCCEEE
Q ss_conf 6544555676743111899998899998601763686035947-874789--9999999999999999999830998598
Q 005511 537 GRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEM-IVFRQL--TKLEVKEIADIMLKEVFDRLKTKDIELQ 613 (693)
Q Consensus 537 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~r~~~~-i~f~~l--~~~~~~~i~~~~l~~~~~~~~~~~~~l~ 613 (693)
..|+++|+.|+... +.+||| ..+|+..++...+..+..+..... ..
T Consensus 153 -----------------------------~~f~~~L~~~l~~~~i~lPpLreR~~Di~~l~~~~l~~~~~~~~~~~--~~ 201 (247)
T d1ny5a2 153 -----------------------------GKFREDLYYRLGVIEIEIPPLRERKEDIIPLANHFLKKFSRKYAKEV--EG 201 (247)
T ss_dssp -----------------------------TSSCHHHHHHHTTEEEECCCGGGCHHHHHHHHHHHHHHHHHHTTCCC--CE
T ss_pred -----------------------------CCCCHHHHHHCCEEEECCCCHHHCHHHHHHHHHHHHHHHHHHCCCCC--CC
T ss_conf -----------------------------99748888640810655897011624576640013433466507877--88
Q ss_pred ECHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
Q ss_conf 39889999998044988996037999999989
Q 005511 614 VTERFRERVVEEGYNPSYGARPLRRAIMRLLE 645 (693)
Q Consensus 614 ~~~~~~~~l~~~~~~~~~g~r~l~~~i~~~i~ 645 (693)
+++++.+.|..+.|++| .++|++++++.+.
T Consensus 202 ls~~al~~L~~~~WPGN--l~EL~~~l~~a~~ 231 (247)
T d1ny5a2 202 FTKSAQELLLSYPWYGN--VRELKNVIERAVL 231 (247)
T ss_dssp ECHHHHHHHHHSCCTTH--HHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHCCCCCH--HHHHHHHHHHHHH
T ss_conf 89999999984899989--9999999999998
No 20
>d1lv7a_ c.37.1.20 (A:) AAA domain of cell division protein FtsH {Escherichia coli [TaxId: 562]}
Probab=99.87 E-value=2.3e-20 Score=153.70 Aligned_cols=199 Identities=20% Similarity=0.314 Sum_probs=143.7
Q ss_pred HCCCCCHHHHHHHHHHHHHHHHHCCC----CCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHH
Q ss_conf 52526938999999999999750278----99998438999515889279999999999639975405533543221000
Q 005511 375 HKRVIGQDEAVKAISRAIRRARVGLK----NPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHT 450 (693)
Q Consensus 375 ~~~i~Gq~~~i~~l~~~i~~~~~~~~----~~~~~~~~ill~Gp~GtGKt~lA~~la~~l~~~~~~~~~~~~~~~~~~~~ 450 (693)
+++++|.+.+++.+.+.+........ ..+.|. ++||+||||||||++|+++|+.+ +.+++.++++++..
T Consensus 11 ~~Di~Gl~~~k~~l~e~v~~~~~~~~~~~~g~~~~~-~iLL~GppGtGKT~la~~iA~~~---~~~~~~i~~~~l~~--- 83 (256)
T d1lv7a_ 11 FADVAGCDEAKEEVAELVEYLREPSRFQKLGGKIPK-GVLMVGPPGTGKTLLAKAIAGEA---KVPFFTISGSDFVE--- 83 (256)
T ss_dssp GGGSCSCHHHHHHTHHHHHHHHCGGGC-----CCCC-EEEEECCTTSCHHHHHHHHHHHH---TCCEEEECSCSSTT---
T ss_pred HHHHHCHHHHHHHHHHHHHHHHCHHHHHHCCCCCCC-EEEEECCCCCCCCHHHHHHHHHC---CCCEEEEEHHHHHH---
T ss_conf 999816399999999999998799999986999888-67866899888228999999982---99879988699426---
Q ss_pred HHHHCCCCCCCCCCCCC--CHHHHHHHCCCCEEEEECCCCCCCH--------------HHHHHHHHHHHCCEEECCCCCE
Q ss_conf 11002899987676751--2266999809998999846742298--------------8999999974056463799983
Q 005511 451 VSKLIGSPPGYVGYTEG--GQLTEAVRRRPYTVVLFDEIEKAHP--------------DVFNMMLQILEDGRLTDSKGRT 514 (693)
Q Consensus 451 ~~~l~g~~~~~~g~~~~--~~l~~~~~~~~~~vl~iDEid~l~~--------------~~~~~Ll~~le~g~~~~~~~~~ 514 (693)
.|+|.++. ..++..++...++||||||+|.+.+ .+.+.|+..+++..
T Consensus 84 ---------~~~g~~~~~l~~~f~~A~~~~P~il~iDeiD~l~~~r~~~~~~~~~~~~~~~~~ll~~~d~~~-------- 146 (256)
T d1lv7a_ 84 ---------MFVGVGASRVRDMFEQAKKAAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFE-------- 146 (256)
T ss_dssp ---------SCCCCCHHHHHHHHHHHHTTCSEEEEETTHHHHTCCCSTTSCCTTCHHHHHHHHHHHHHHTCC--------
T ss_pred ---------CCHHHHHHHHHHHHHHHHHCCCEEEEEECHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC--------
T ss_conf ---------001078999999999999759989999775665756789888874899999999999953877--------
Q ss_pred EECCCEEEEEECCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHH--HCCCCEEECCCCCHHHHHH
Q ss_conf 31697699995388825664066544555676743111899998899998601763686--0359478747899999999
Q 005511 515 VDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFL--NRLDEMIVFRQLTKLEVKE 592 (693)
Q Consensus 515 ~~~~~~i~I~tsn~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~--~r~~~~i~f~~l~~~~~~~ 592 (693)
..+++++|+|||.... ++++|+ +||+..+.|++|+.++..+
T Consensus 147 -~~~~v~vIatTn~~~~------------------------------------ld~al~R~gRfd~~i~i~~P~~~~R~~ 189 (256)
T d1lv7a_ 147 -GNEGIIVIAATNRPDV------------------------------------LDPALLRPGRFDRQVVVGLPDVRGREQ 189 (256)
T ss_dssp -SSSCEEEEEEESCTTT------------------------------------SCGGGGSTTSSCEEEECCCCCHHHHHH
T ss_pred -CCCCEEEEEECCCCCC------------------------------------CCHHHCCCCCCCEEEECCCCCHHHHHH
T ss_conf -7799899980799310------------------------------------798576898787798779959999999
Q ss_pred HHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 999999999999830998598398899999980449889960379999999899
Q 005511 593 IADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLED 646 (693)
Q Consensus 593 i~~~~l~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~g~r~l~~~i~~~i~~ 646 (693)
|++..+.. ..+. .+.-...+++ ....+..++|++.++.....
T Consensus 190 il~~~l~~---------~~~~-~~~~~~~la~--~t~G~s~adi~~l~~~A~~~ 231 (256)
T d1lv7a_ 190 ILKVHMRR---------VPLA-PDIDAAIIAR--GTPGFSGADLANLVNEAALF 231 (256)
T ss_dssp HHHHHHTT---------SCBC-TTCCHHHHHH--TCTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHCCC---------CCCC-CCCCHHHHHH--HCCCCCHHHHHHHHHHHHHH
T ss_conf 99984259---------9868-6569999998--68998999999999999999
No 21
>d1ixza_ c.37.1.20 (A:) AAA domain of cell division protein FtsH {Thermus thermophilus [TaxId: 274]}
Probab=99.85 E-value=2e-20 Score=154.15 Aligned_cols=199 Identities=21% Similarity=0.293 Sum_probs=139.0
Q ss_pred HCCCCCHHHHHHHHHHHHHHHHH----CCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHH
Q ss_conf 52526938999999999999750----27899998438999515889279999999999639975405533543221000
Q 005511 375 HKRVIGQDEAVKAISRAIRRARV----GLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHT 450 (693)
Q Consensus 375 ~~~i~Gq~~~i~~l~~~i~~~~~----~~~~~~~~~~~ill~Gp~GtGKt~lA~~la~~l~~~~~~~~~~~~~~~~~~~~ 450 (693)
+++|+|.+.+++.+.+.+..... .......|. ++||+||||||||++|+++|+.+ +.+++.++++.+..
T Consensus 8 ~~di~G~~~~k~~l~~~i~~l~~~~~~~~~g~~~~~-giLl~GppGtGKT~la~aia~~~---~~~~~~i~~~~l~~--- 80 (247)
T d1ixza_ 8 FKDVAGAEEAKEELKEIVEFLKNPSRFHEMGARIPK-GVLLVGPPGVGKTHLARAVAGEA---RVPFITASGSDFVE--- 80 (247)
T ss_dssp GGGCCSCHHHHHHHHHHHHHHHCHHHHHHTTCCCCS-EEEEECCTTSSHHHHHHHHHHHT---TCCEEEEEHHHHHH---
T ss_pred HHHHCCHHHHHHHHHHHHHHHHCHHHHHHCCCCCCC-EEEEECCCCCCHHHHHHHHHHHC---CCCEEEEEHHHHHH---
T ss_conf 999715799999999999998799999975999886-48876689888359999999873---99779978699646---
Q ss_pred HHHHCCCCCCCCCCCCC--CHHHHHHHCCCCEEEEECCCCCCCH--------------HHHHHHHHHHHCCEEECCCCCE
Q ss_conf 11002899987676751--2266999809998999846742298--------------8999999974056463799983
Q 005511 451 VSKLIGSPPGYVGYTEG--GQLTEAVRRRPYTVVLFDEIEKAHP--------------DVFNMMLQILEDGRLTDSKGRT 514 (693)
Q Consensus 451 ~~~l~g~~~~~~g~~~~--~~l~~~~~~~~~~vl~iDEid~l~~--------------~~~~~Ll~~le~g~~~~~~~~~ 514 (693)
.|+|..+. ..++..++...++||||||+|.+.. .+.+.|+..|++-.
T Consensus 81 ---------~~~g~~~~~l~~~f~~a~~~~p~Ii~iDeid~l~~~r~~~~~~~~~~~~~~~~~ll~~~d~~~-------- 143 (247)
T d1ixza_ 81 ---------MFVGVGAARVRDLFETAKRHAPCIVFIDEIDAVGRKRGSGVGGGNDEREQTLNQLLVEMDGFE-------- 143 (247)
T ss_dssp ---------SCTTHHHHHHHHHHHHHTTSSSEEEEEETHHHHHC---------CHHHHHHHHHHHHHHHTCC--------
T ss_pred ---------CCCCHHHHHHHHHHHHHHHCCCEEEEEECHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC--------
T ss_conf ---------245389999999999999769979999773664746789988875899999999999963877--------
Q ss_pred EECCCEEEEEECCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHH--HCCCCEEECCCCCHHHHHH
Q ss_conf 31697699995388825664066544555676743111899998899998601763686--0359478747899999999
Q 005511 515 VDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFL--NRLDEMIVFRQLTKLEVKE 592 (693)
Q Consensus 515 ~~~~~~i~I~tsn~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~--~r~~~~i~f~~l~~~~~~~ 592 (693)
...++++|+|||.... ++++|+ +||+..+.|++|+.++..+
T Consensus 144 -~~~~vivi~tTn~~~~------------------------------------ld~al~R~~Rf~~~i~~~~P~~~eR~~ 186 (247)
T d1ixza_ 144 -KDTAIVVMAATNRPDI------------------------------------LDPALLRPGRFDRQIAIDAPDVKGREQ 186 (247)
T ss_dssp -TTCCEEEEEEESCGGG------------------------------------SCGGGGSTTSSCEEEECCSCCHHHHHH
T ss_pred -CCCCEEEEEECCCCCC------------------------------------CCHHHCCCCCCCEEEEECCCCHHHHHH
T ss_conf -7899899980799400------------------------------------699675898785799979969999999
Q ss_pred HHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 999999999999830998598398899999980449889960379999999899
Q 005511 593 IADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLED 646 (693)
Q Consensus 593 i~~~~l~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~g~r~l~~~i~~~i~~ 646 (693)
|++..+... ... .+.....|++. ...+..++|++.+......
T Consensus 187 il~~~l~~~-------~~~---~~~~~~~la~~--t~g~s~~di~~lv~~A~l~ 228 (247)
T d1ixza_ 187 ILRIHARGK-------PLA---EDVDLALLAKR--TPGFVGADLENLLNEAALL 228 (247)
T ss_dssp HHHHHHTTS-------CBC---TTCCHHHHHHT--CTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHCCC-------CCC---CCCCHHHHHHH--CCCCCHHHHHHHHHHHHHH
T ss_conf 999875065-------776---54689999977--8898899999999999999
No 22
>d1ixsb2 c.37.1.20 (B:4-242) Holliday junction helicase RuvB {Thermus thermophilus [TaxId: 274]}
Probab=99.85 E-value=2.1e-19 Score=147.12 Aligned_cols=186 Identities=23% Similarity=0.242 Sum_probs=132.0
Q ss_pred HHCCCCCCCCCCHHHHHHHHHHHHC-----CCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCC
Q ss_conf 3209998766888999999999703-----99998078889997199999999999755999998899669998652101
Q 005511 36 AEEGKLDPVVGRQPQIERVVQILGR-----RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLV 110 (693)
Q Consensus 36 ~~~~~~~~ivG~~~~~~~l~~~l~~-----~~~~~ilL~GppGtGKT~la~~la~~l~~~~~~~~~~~~~~~~~~~~~~~ 110 (693)
+||++|++++|++++++.+..++.. ..++++||+||||||||++|+++|+++ +.++..++.+...
T Consensus 3 ~RP~~~ddivGq~~~~~~L~~~i~~~~~~~~~~~~~Ll~GPpG~GKTtla~~la~~~----------~~~~~~~~~~~~~ 72 (239)
T d1ixsb2 3 LRPKTLDEYIGQERLKQKLRVYLEAAKARKEPLEHLLLFGPPGLGKTTLAHVIAHEL----------GVNLRVTSGPAIE 72 (239)
T ss_dssp CCCCSGGGSCSCHHHHHHHHHHHHHHTTSSSCCCCEEEECCTTSCHHHHHHHHHHHH----------TCCEEEEETTTCC
T ss_pred CCCCCHHHHCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHH----------CCCEEECCCCCCC
T ss_conf 697988894898999999999999787358888738988979987888999999984----------9874754687534
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHCCCCCCHHHHHHHHHHHHC--------------------CCC
Q ss_conf 397446618999999999997089849999160033108999884769998833110--------------------798
Q 005511 111 AGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLA--------------------RGE 170 (693)
Q Consensus 111 ~~~~~~g~~~~~~~~~~~~~~~~~~~iL~iDEid~l~~~~~~~~~~~~~~~L~~~l~--------------------~~~ 170 (693)
. .+.. ....... .....++++||+|.+.+. .+..+...++ ...
T Consensus 73 ~----~~~~----~~~~~~~-~~~~~i~~iDe~~~~~~~--------~~~~l~~~~e~~~~~~~~~~~~~~~~~~~~~~~ 135 (239)
T d1ixsb2 73 K----PGDL----AAILANS-LEEGDILFIDEIHRLSRQ--------AEEHLYPAMEDFVMDIVIGQGPAARTIRLELPR 135 (239)
T ss_dssp S----HHHH----HHHHHTT-CCTTCEEEEETGGGCCHH--------HHHHHHHHHHHSEEEEECSCTTCCCEEEEECCC
T ss_pred C----CHHH----HHHHHHH-CCCCCEEEEECCCCCCHH--------HHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCC
T ss_conf 3----2146----8998851-038873443110011044--------787500124333212110465565433468997
Q ss_pred CEEEEEECHHHHHHHHHCCHHHHCC-CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCC
Q ss_conf 1799974358898542039888546-783115899999999999999996722037666858999999864441004677
Q 005511 171 LQCIGATTLDEYRKHIEKDPALERR-FQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFL 249 (693)
Q Consensus 171 i~iI~~t~~~~~~~~~~l~~~l~~R-f~~i~~~~p~~~e~~~il~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~ 249 (693)
+.++++++.+. ...+..++| +..+.+..|+.+++..++...+.. .++.++++.+..++..+.|.+
T Consensus 136 ~~~i~~~~~~~-----~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~----~~i~~~~~~l~~ia~~s~gd~----- 201 (239)
T d1ixsb2 136 FTLIGATTRPG-----LITAPLLSRFGIVEHLEYYTPEELAQGVMRDARL----LGVRITEEAALEIGRRSRGTM----- 201 (239)
T ss_dssp CEEEEEESCCS-----SCSCGGGGGCSEEEECCCCCHHHHHHHHHHHHGG----GCCCBCHHHHHHHHHHTTSSH-----
T ss_pred EEEEEECCCCC-----CCCCHHHCCCCEEEEEECCCHHHHHHHHHHHHHH----HCCCCCHHHHHHHHHHCCCCH-----
T ss_conf 79996306833-----3441010122145675205745555788999998----487652678999999769999-----
Q ss_pred CHHHHHHHHHHHHH
Q ss_conf 03466699987568
Q 005511 250 PDKAIDLIDEAGSR 263 (693)
Q Consensus 250 ~~~a~~~l~~a~~~ 263 (693)
|.|+.+++.+...
T Consensus 202 -R~a~~~l~~~~~~ 214 (239)
T d1ixsb2 202 -RVAKRLFRRVRDF 214 (239)
T ss_dssp -HHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHH
T ss_conf -9999999999999
No 23
>d1sxje2 c.37.1.20 (E:4-255) Replication factor C5 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.84 E-value=4.5e-20 Score=151.71 Aligned_cols=208 Identities=15% Similarity=0.195 Sum_probs=138.4
Q ss_pred HHHHHHCCCCCCCCCCHHHHHHHHHHHHCC-CCCCEEEECCCCCHHHHHHHHHHHHHHCCCCC-CCCCCCEE-------E
Q ss_conf 665432099987668889999999997039-99980788899971999999999997559999-98899669-------9
Q 005511 32 LTKLAEEGKLDPVVGRQPQIERVVQILGRR-TKNNPCLIGEPGVGKTAIAEGLAQRIASGDVP-DTIEGKKV-------I 102 (693)
Q Consensus 32 l~~~~~~~~~~~ivG~~~~~~~l~~~l~~~-~~~~ilL~GppGtGKT~la~~la~~l~~~~~~-~~~~~~~~-------~ 102 (693)
|+|+|+|.++++++|+++.++.+..++... ..+++||+||||||||++|+++|+.+...... ........ .
T Consensus 1 W~eky~P~~~~diig~~~~~~~L~~~~~~~~~~~~lll~Gp~G~GKTt~~~~la~~l~~~~~~~~~~~~~~~~~~~~~~~ 80 (252)
T d1sxje2 1 WVDKYRPKSLNALSHNEELTNFLKSLSDQPRDLPHLLLYGPNGTGKKTRCMALLESIFGPGVYRLKIDVRQFVTASNRKL 80 (252)
T ss_dssp CTTTTCCCSGGGCCSCHHHHHHHHTTTTCTTCCCCEEEECSTTSSHHHHHHTHHHHHSCTTCCC----------------
T ss_pred CCCCCCCCCHHHCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHH
T ss_conf 98353889798835839999999999976998785998899999889999999976227642222212344434666311
Q ss_pred EEEC-----CCCCCCCCCCCHHHHHHHHHHHHH--------------HHCCCEEEEEECCCHHHHCCCCCCHHHHHHHHH
Q ss_conf 9865-----210139744661899999999999--------------708984999916003310899988476999883
Q 005511 103 TLDM-----GLLVAGTKYRGEFEERLKKLMEEI--------------KQSDEIILFIDEVHTLIGAGAAEGAIDAANILK 163 (693)
Q Consensus 103 ~~~~-----~~~~~~~~~~g~~~~~~~~~~~~~--------------~~~~~~iL~iDEid~l~~~~~~~~~~~~~~~L~ 163 (693)
.+.. ........................ ......+++|||+|.+.. ..++.|+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iiiide~d~l~~--------~~~~~l~ 152 (252)
T d1sxje2 81 ELNVVSSPYHLEITPSDMGNNDRIVIQELLKEVAQMEQVDFQDSKDGLAHRYKCVIINEANSLTK--------DAQAALR 152 (252)
T ss_dssp --CCEECSSEEEECCC----CCHHHHHHHHHHHTTTTC------------CCEEEEEECTTSSCH--------HHHHHHH
T ss_pred HHHHCCCCCCCEEEECCCCCCCCCEEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCC--------CCCHHHH
T ss_conf 22110477631000010445775224310223434331001211466678724999424333454--------3111221
Q ss_pred HHHC--CCCCEEEEEECHHHHHHHHHCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC-CHHHHHHHHHHH
Q ss_conf 3110--7981799974358898542039888546783115899999999999999996722037666-858999999864
Q 005511 164 PSLA--RGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRY-TDEALVSAAQLS 240 (693)
Q Consensus 164 ~~l~--~~~i~iI~~t~~~~~~~~~~l~~~l~~Rf~~i~~~~p~~~e~~~il~~~~~~~~~~~~~~~-~~~~l~~l~~~~ 240 (693)
..++ ...+.+|++||..+ .+.+++++||..+.|++|+.++..+++...+.. .++.+ ++++++.++..+
T Consensus 153 ~~~e~~~~~~~~Il~tn~~~-----~i~~~l~sR~~~i~~~~~~~~~~~~~l~~i~~~----e~~~~~~~~~l~~i~~~s 223 (252)
T d1sxje2 153 RTMEKYSKNIRLIMVCDSMS-----PIIAPIKSQCLLIRCPAPSDSEISTILSDVVTN----ERIQLETKDILKRIAQAS 223 (252)
T ss_dssp HHHHHSTTTEEEEEEESCSC-----SSCHHHHTTSEEEECCCCCHHHHHHHHHHHHHH----HTCEECCSHHHHHHHHHH
T ss_pred CCCCCCCCCCCCEEEECCCC-----CHHHHHHCCHHEEEECCCCHHHHHHHHHHHHHH----CCCCCCCHHHHHHHHHHC
T ss_conf 00221356643000102111-----002544210002430353304689999999998----399989699999999986
Q ss_pred HHHHCCCCCCHHHHHHHHHHHH
Q ss_conf 4410046770346669998756
Q 005511 241 YQYISDRFLPDKAIDLIDEAGS 262 (693)
Q Consensus 241 ~~~~~~~~~~~~a~~~l~~a~~ 262 (693)
.|.+ |.|+..|+.++.
T Consensus 224 ~Gd~------R~ai~~Lq~~~~ 239 (252)
T d1sxje2 224 NGNL------RVSLLMLESMAL 239 (252)
T ss_dssp TTCH------HHHHHHHTHHHH
T ss_pred CCCH------HHHHHHHHHHHH
T ss_conf 9949------999999999997
No 24
>d1sxja2 c.37.1.20 (A:295-547) Replication factor C1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.84 E-value=1.4e-20 Score=155.13 Aligned_cols=197 Identities=17% Similarity=0.222 Sum_probs=138.1
Q ss_pred HHHHHHCCCCCCCCCCHHHHHHHHHHHHC-----------------CCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCC
Q ss_conf 66543209998766888999999999703-----------------9999807888999719999999999975599999
Q 005511 32 LTKLAEEGKLDPVVGRQPQIERVVQILGR-----------------RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPD 94 (693)
Q Consensus 32 l~~~~~~~~~~~ivG~~~~~~~l~~~l~~-----------------~~~~~ilL~GppGtGKT~la~~la~~l~~~~~~~ 94 (693)
|+++|+|.+|++++|++..+++|.+++.. ...+++||+||||||||++|+++|+++
T Consensus 4 W~eky~P~~~~dlig~~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~lll~GPpG~GKTt~a~~la~~~------- 76 (253)
T d1sxja2 4 WTVKYAPTNLQQVCGNKGSVMKLKNWLANWENSKKNSFKHAGKDGSGVFRAAMLYGPPGIGKTTAAHLVAQEL------- 76 (253)
T ss_dssp HHHHTCCSSGGGCCSCHHHHHHHHHHHHTHHHHHHTTTCCCCTTSTTSCSEEEEECSTTSSHHHHHHHHHHHT-------
T ss_pred CCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHH-------
T ss_conf 6537689999996698999999999999625300234323202578887449998799998889999999998-------
Q ss_pred CCCCCEEEEEECCCCCCCCCCCCHHHHHHHH--------------HHHHHHHCCCEEEEEECCCHHHHCCCCCCHHHHHH
Q ss_conf 8899669998652101397446618999999--------------99999708984999916003310899988476999
Q 005511 95 TIEGKKVITLDMGLLVAGTKYRGEFEERLKK--------------LMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAAN 160 (693)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~--------------~~~~~~~~~~~iL~iDEid~l~~~~~~~~~~~~~~ 160 (693)
+.+++.++.+....+.. ....+.. ...........++++||+|.+.... .....
T Consensus 77 ---~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~ide~~~~~~~~-----~~~~~ 144 (253)
T d1sxja2 77 ---GYDILEQNASDVRSKTL----LNAGVKNALDNMSVVGYFKHNEEAQNLNGKHFVIIMDEVDGMSGGD-----RGGVG 144 (253)
T ss_dssp ---TCEEEEECTTSCCCHHH----HHHTGGGGTTBCCSTTTTTC----CCSSTTSEEEEECSGGGCCTTS-----TTHHH
T ss_pred ---HHHHHCCCCCCCHHHHH----HHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCH-----HHHHH
T ss_conf ---75120134432211688----9999988763121210133432014556651377763011111000-----13467
Q ss_pred HHHHHHCCCCCEEEEEECHHHHHHHHHCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
Q ss_conf 88331107981799974358898542039888546783115899999999999999996722037666858999999864
Q 005511 161 ILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240 (693)
Q Consensus 161 ~L~~~l~~~~i~iI~~t~~~~~~~~~~l~~~l~~Rf~~i~~~~p~~~e~~~il~~~~~~~~~~~~~~~~~~~l~~l~~~~ 240 (693)
.+..........++++++.... ...+.+++|+..+.|++|+.+++..+++.++.+ +++.++++++..++..+
T Consensus 145 ~~~~~~~~~~~~ii~i~~~~~~----~~~~~l~~~~~~i~f~~~~~~~i~~~l~~i~~~----e~i~i~~~~l~~i~~~s 216 (253)
T d1sxja2 145 QLAQFCRKTSTPLILICNERNL----PKMRPFDRVCLDIQFRRPDANSIKSRLMTIAIR----EKFKLDPNVIDRLIQTT 216 (253)
T ss_dssp HHHHHHHHCSSCEEEEESCTTS----STTGGGTTTSEEEECCCCCHHHHHHHHHHHHHH----HTCCCCTTHHHHHHHHT
T ss_pred HHHHHHCCCCCCCCCCCCCCCC----CCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHH----HCCCCCHHHHHHHHHHC
T ss_conf 7765401234222111355552----113532440365311453146788999999998----09999999999999967
Q ss_pred HHHHCCCCCCHHHHHHHHHHH
Q ss_conf 441004677034666999875
Q 005511 241 YQYISDRFLPDKAIDLIDEAG 261 (693)
Q Consensus 241 ~~~~~~~~~~~~a~~~l~~a~ 261 (693)
.|.+ |.++..|+.+.
T Consensus 217 ~GDi------R~ai~~L~~~~ 231 (253)
T d1sxja2 217 RGDI------RQVINLLSTIS 231 (253)
T ss_dssp TTCH------HHHHHHHTHHH
T ss_pred CCCH------HHHHHHHHHHH
T ss_conf 9709------99999999999
No 25
>d1in4a2 c.37.1.20 (A:17-254) Holliday junction helicase RuvB {Thermotoga maritima [TaxId: 2336]}
Probab=99.83 E-value=5e-18 Score=137.62 Aligned_cols=181 Identities=18% Similarity=0.282 Sum_probs=135.7
Q ss_pred HHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHH
Q ss_conf 85252693899999999999975027899998438999515889279999999999639975405533543221000110
Q 005511 374 LHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSK 453 (693)
Q Consensus 374 l~~~i~Gq~~~i~~l~~~i~~~~~~~~~~~~~~~~ill~Gp~GtGKt~lA~~la~~l~~~~~~~~~~~~~~~~~~~~~~~ 453 (693)
-+++++||+++++.+..++..+..... +.+++||+||||||||++|+++|+.+ +.++..++.......
T Consensus 7 ~~~divGqe~~~~~l~~~i~~~~~~~~----~~~~~L~~GPpGtGKT~lA~~la~~~---~~~~~~~~~~~~~~~----- 74 (238)
T d1in4a2 7 SLDEFIGQENVKKKLSLALEAAKMRGE----VLDHVLLAGPPGLGKTTLAHIIASEL---QTNIHVTSGPVLVKQ----- 74 (238)
T ss_dssp SGGGCCSCHHHHHHHHHHHHHHHHHTC----CCCCEEEESSTTSSHHHHHHHHHHHH---TCCEEEEETTTCCSH-----
T ss_pred CHHHCCCHHHHHHHHHHHHHHHHHCCC----CCCEEEEECCCCCCHHHHHHHHHHCC---CCCCCCCCCCCCCCH-----
T ss_conf 299908959999999999997885388----77748987999973889999998503---888533257442248-----
Q ss_pred HCCCCCCCCCCCCCCHHHHHH-HCCCCEEEEECCCCCCCHHHHHHHHHHHHCCEEECCC-------CCEEECCCEEEEEE
Q ss_conf 028999876767512266999-8099989998467422988999999974056463799-------98331697699995
Q 005511 454 LIGSPPGYVGYTEGGQLTEAV-RRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSK-------GRTVDFKNTLLIMT 525 (693)
Q Consensus 454 l~g~~~~~~g~~~~~~l~~~~-~~~~~~vl~iDEid~l~~~~~~~Ll~~le~g~~~~~~-------~~~~~~~~~i~I~t 525 (693)
..+...+ ....++++|+||++++++..++.++..++.+...... .......++++|++
T Consensus 75 --------------~~~~~~~~~~~~~~~~~ide~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~a 140 (238)
T d1in4a2 75 --------------GDMAAILTSLERGDVLFIDEIHRLNKAVEELLYSAIEDFQIDIMIGKGPSAKSIRIDIQPFTLVGA 140 (238)
T ss_dssp --------------HHHHHHHHHCCTTCEEEEETGGGCCHHHHHHHHHHHHTSCCCC---------------CCCEEEEE
T ss_pred --------------HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCCCCCCCCCEEEEEE
T ss_conf --------------889999875435882477789884067776421402441454454376002444457887699995
Q ss_pred CCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 38882566406654455567674311189999889999860176368603594787478999999999999999999998
Q 005511 526 SNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRL 605 (693)
Q Consensus 526 sn~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~r~~~~i~f~~l~~~~~~~i~~~~l~~~~~~~ 605 (693)
||.... ..+++.+||..++.|.+++.+++..++......
T Consensus 141 t~~~~~------------------------------------~~~~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~----- 179 (238)
T d1in4a2 141 TTRSGL------------------------------------LSSPLRSRFGIILELDFYTVKELKEIIKRAASL----- 179 (238)
T ss_dssp ESCGGG------------------------------------SCHHHHTTCSEEEECCCCCHHHHHHHHHHHHHH-----
T ss_pred CCCCCC------------------------------------CCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHH-----
T ss_conf 478755------------------------------------554311330079984478778777777776530-----
Q ss_pred HCCCCEEEECHHHHHHHHHH
Q ss_conf 30998598398899999980
Q 005511 606 KTKDIELQVTERFRERVVEE 625 (693)
Q Consensus 606 ~~~~~~l~~~~~~~~~l~~~ 625 (693)
....+++++++.+++.
T Consensus 180 ----~~~~~~~~~l~~i~~~ 195 (238)
T d1in4a2 180 ----MDVEIEDAAAEMIAKR 195 (238)
T ss_dssp ----TTCCBCHHHHHHHHHT
T ss_pred ----CCCHHHHHHHHHHHHH
T ss_conf ----1100257999999996
No 26
>d1e32a2 c.37.1.20 (A:201-458) Membrane fusion ATPase VCP/p97 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.83 E-value=3.5e-19 Score=145.61 Aligned_cols=205 Identities=18% Similarity=0.262 Sum_probs=145.2
Q ss_pred HCCCCCHHHHHHHHHHHHHHHHH-----CCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCCHH
Q ss_conf 52526938999999999999750-----2789999843899951588927999999999963997540553354322100
Q 005511 375 HKRVIGQDEAVKAISRAIRRARV-----GLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERH 449 (693)
Q Consensus 375 ~~~i~Gq~~~i~~l~~~i~~~~~-----~~~~~~~~~~~ill~Gp~GtGKt~lA~~la~~l~~~~~~~~~~~~~~~~~~~ 449 (693)
|++|.|.+.+++.+.+.+..+.. .......|. ++||+||||||||++++++|+.+ +.+++.++++.+...
T Consensus 3 ~~dv~G~~~~k~~l~~~i~~~l~~~~~~~~~g~~~~~-giLL~GppGtGKT~l~~ala~~~---~~~~~~i~~~~l~~~- 77 (258)
T d1e32a2 3 YDDVGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPR-GILLYGPPGTGKTLIARAVANET---GAFFFLINGPEIMSK- 77 (258)
T ss_dssp GGGCCSCSHHHHHHHHHHHHHHHCHHHHHHCCCCCCC-EEEEECCTTSSHHHHHHHHHHHT---TCEEEEECHHHHTTS-
T ss_pred HHHHCCHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCC-EEEEECCCCCCCHHHHHHHHHHH---CCEEEEEECHHHCCC-
T ss_conf 6663109999999999999883199999867999886-46876699888308999999874---883799973043025-
Q ss_pred HHHHHCCCCCCCCCCCCC--CHHHHHHHCCCCEEEEECCCCCCCH-----------HHHHHHHHHHHCCEEECCCCCEEE
Q ss_conf 011002899987676751--2266999809998999846742298-----------899999997405646379998331
Q 005511 450 TVSKLIGSPPGYVGYTEG--GQLTEAVRRRPYTVVLFDEIEKAHP-----------DVFNMMLQILEDGRLTDSKGRTVD 516 (693)
Q Consensus 450 ~~~~l~g~~~~~~g~~~~--~~l~~~~~~~~~~vl~iDEid~l~~-----------~~~~~Ll~~le~g~~~~~~~~~~~ 516 (693)
|+|.... ..++..++...++||||||+|.+.+ .+.+.++..++... .
T Consensus 78 -----------~~g~~~~~l~~~f~~A~~~~p~il~iDeid~l~~~r~~~~~~~~~~~~~~~~~~~~~~~---------~ 137 (258)
T d1e32a2 78 -----------LAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLK---------Q 137 (258)
T ss_dssp -----------CTTHHHHHHHHHHHHHHHTCSEEEEESSGGGTCCHHHHCCCTTHHHHHHHHHHHHHTCC---------C
T ss_pred -----------CCCCHHHHHHHHHHHHHHCCCEEEEEHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCC---------C
T ss_conf -----------45617888899999998649949985211132257887777068999877500110123---------4
Q ss_pred CCCEEEEEECCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHH--CCCCEEECCCCCHHHHHHHH
Q ss_conf 6976999953888256640665445556767431118999988999986017636860--35947874789999999999
Q 005511 517 FKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLN--RLDEMIVFRQLTKLEVKEIA 594 (693)
Q Consensus 517 ~~~~i~I~tsn~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~--r~~~~i~f~~l~~~~~~~i~ 594 (693)
..++++|+|||.... +++++++ ||+..+.|++|+.++..+|+
T Consensus 138 ~~~vlvi~tTn~~~~------------------------------------ld~al~r~gRfd~~i~~~~P~~~~R~~il 181 (258)
T d1e32a2 138 RAHVIVMAATNRPNS------------------------------------IDPALRRFGRFDREVDIGIPDATGRLEIL 181 (258)
T ss_dssp SSCEEEEEEESCGGG------------------------------------SCGGGTSTTSSCEEEECCCCCHHHHHHHH
T ss_pred CCCCCEEEECCCCCC------------------------------------CCHHHHHCCCCCCEEECCCCCHHHHHHHH
T ss_conf 688117975799310------------------------------------25245424630232378999988999873
Q ss_pred HHHHHHHHHHHHCCCCEEEECHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 9999999999830998598398899999980449889960379999999899999998
Q 005511 595 DIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKM 652 (693)
Q Consensus 595 ~~~l~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~g~r~l~~~i~~~i~~~l~~~~ 652 (693)
+..+.. ..+. .+.-+..|++. ...+.+++|.+.++.....++.+..
T Consensus 182 ~~~l~~---------~~~~-~~~~~~~la~~--t~G~s~adl~~lv~~A~~~a~~~~~ 227 (258)
T d1e32a2 182 QIHTKN---------MKLA-DDVDLEQVANE--THGHVGADLAALCSEAALQAIRKKM 227 (258)
T ss_dssp HHTTTT---------SCBC-TTCCHHHHHHH--CTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHCCC---------CCCC-CCCCHHHHHHC--CCCCCHHHHHHHHHHHHHHHHHHHC
T ss_conf 220457---------6334-55303444420--6677899999999999999998504
No 27
>d1ofha_ c.37.1.20 (A:) HslU {Haemophilus influenzae [TaxId: 727]}
Probab=99.82 E-value=3.2e-19 Score=145.87 Aligned_cols=158 Identities=23% Similarity=0.302 Sum_probs=122.7
Q ss_pred CCCCCHHHHHHHHHHHHC--------------CCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCC
Q ss_conf 766888999999999703--------------999980788899971999999999997559999988996699986521
Q 005511 43 PVVGRQPQIERVVQILGR--------------RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGL 108 (693)
Q Consensus 43 ~ivG~~~~~~~l~~~l~~--------------~~~~~ilL~GppGtGKT~la~~la~~l~~~~~~~~~~~~~~~~~~~~~ 108 (693)
.++||+++++.+..++.. .++.++||+||||||||.+|+++|+.+ +.+++.++++.
T Consensus 15 ~ViGQd~A~~~l~~av~~~~~r~~~~~~~~~~~~~~~iLl~GPpG~GKT~lAkalA~~~----------~~~~~~i~~s~ 84 (309)
T d1ofha_ 15 HIIGQADAKRAVAIALRNRWRRMQLQEPLRHEVTPKNILMIGPTGVGKTEIARRLAKLA----------NAPFIKVEATK 84 (309)
T ss_dssp TCCSCHHHHHHHHHHHHHHHHTTSSCHHHHHHCCCCCEEEECCTTSSHHHHHHHHHHHH----------TCCEEEEEGGG
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHCC----------CCCHHCCCCCC
T ss_conf 13491999999999999898772457877667898669998999988889999986213----------22100034433
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHH-----CCCEEEEEECCCHHHHCCCCCCHH----HHHHHHHHHHCCC----------
Q ss_conf 013974466189999999999970-----898499991600331089998847----6999883311079----------
Q 005511 109 LVAGTKYRGEFEERLKKLMEEIKQ-----SDEIILFIDEVHTLIGAGAAEGAI----DAANILKPSLARG---------- 169 (693)
Q Consensus 109 ~~~~~~~~g~~~~~~~~~~~~~~~-----~~~~iL~iDEid~l~~~~~~~~~~----~~~~~L~~~l~~~---------- 169 (693)
+.....+.+..+..++.++..+.. ..++|+||||+|.+.+.+...... ..++.|+..++..
T Consensus 85 ~~~~~~~~~~~~~~~~~~f~~a~~~~~~~~~~~IIf~DEIdki~~~~~~~~~~~~~~gv~~~LL~~~dg~~~~~~~~~i~ 164 (309)
T d1ofha_ 85 FTEVGYVGKEVDSIIRDLTDSAGGAIDAVEQNGIVFIDEIDKICKKGEYSGADVSREGVQRDLLPLVEGSTVSTKHGMVK 164 (309)
T ss_dssp GSSCCSGGGSTTHHHHHHHHTTTTCHHHHHHHCEEEEECGGGGSCCSSCCSSHHHHHHHHHHHHHHHHCCEEEETTEEEE
T ss_pred CCCCEEEEEECCCCCCCCCHHHHCCCCCCCCCCEEEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCEEECCCEEEE
T ss_conf 01011576411333333212331232003578568842464540301576412012579987528861988855880797
Q ss_pred --CCEEEEEE----CHHHHHHHHHCCHHHHCCCC-CCCCCCCCHHHHHHHHHH
Q ss_conf --81799974----35889854203988854678-311589999999999999
Q 005511 170 --ELQCIGAT----TLDEYRKHIEKDPALERRFQ-PVKVPEPSVDETIQILKG 215 (693)
Q Consensus 170 --~i~iI~~t----~~~~~~~~~~l~~~l~~Rf~-~i~~~~p~~~e~~~il~~ 215 (693)
.+.+|++. +.+. .++|.+++||+ .+.|++|+..++.+|+..
T Consensus 165 ~s~ilfi~~ga~~~~~~~-----~~~p~l~~R~~~~i~~~~~~~~~~~~Il~~ 212 (309)
T d1ofha_ 165 TDHILFIASGAFQVARPS-----DLIPELQGRLPIRVELTALSAADFERILTE 212 (309)
T ss_dssp CTTCEEEEEECCSSSCGG-----GSCHHHHHTCCEEEECCCCCHHHHHHHHHS
T ss_pred CCCEEEEECCCHHHCCCC-----CCHHHHHHHHHEEEECCCCCHHHHHHHHHH
T ss_conf 462268704612214720-----012544310200300257887999999988
No 28
>d1w5sa2 c.37.1.20 (A:7-293) CDC6-like protein APE0152, N-terminal domain {Aeropyrum pernix [TaxId: 56636]}
Probab=99.81 E-value=6.9e-18 Score=136.66 Aligned_cols=229 Identities=14% Similarity=0.092 Sum_probs=149.5
Q ss_pred HHHHHHHCCCCCCCCCCHHHHHHHHHHHHC-----CCCC----CEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEE
Q ss_conf 366543209998766888999999999703-----9999----8078889997199999999999755999998899669
Q 005511 31 NLTKLAEEGKLDPVVGRQPQIERVVQILGR-----RTKN----NPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKV 101 (693)
Q Consensus 31 ~l~~~~~~~~~~~ivG~~~~~~~l~~~l~~-----~~~~----~ilL~GppGtGKT~la~~la~~l~~~~~~~~~~~~~~ 101 (693)
.|...|+| +.+.|++.+++.+...+.. ..++ .++|+||||||||++++++++.+.....+.. ....+
T Consensus 8 ~l~~~~~P---~~~~~Re~e~~~l~~~l~~~~~~~~~~~~~~~~l~l~GppGtGKT~l~~~l~~~l~~~~~~~~-~~~~~ 83 (287)
T d1w5sa2 8 VFDENYIP---PELRVRRGEAEALARIYLNRLLSGAGLSDVNMIYGSIGRVGIGKTTLAKFTVKRVSEAAAKEG-LTVKQ 83 (287)
T ss_dssp GGSTTCCC---SSCSSSCHHHHHHHHHHHHHHHTSSCBCCEEEEEECTTCCSSSHHHHHHHHHHHHHHHHHHTT-CCEEE
T ss_pred HCCCCCCC---CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCC-CCCEE
T ss_conf 26875689---988878999999999999999749988885348996789998999999999999875415556-78416
Q ss_pred EEEECCCCCCC--------------CCCCCHHHHHH-HHHHHHH-HHCCCEEEEEECCCHHHHCCCCCCHHHHHHHH---
Q ss_conf 99865210139--------------74466189999-9999999-70898499991600331089998847699988---
Q 005511 102 ITLDMGLLVAG--------------TKYRGEFEERL-KKLMEEI-KQSDEIILFIDEVHTLIGAGAAEGAIDAANIL--- 162 (693)
Q Consensus 102 ~~~~~~~~~~~--------------~~~~g~~~~~~-~~~~~~~-~~~~~~iL~iDEid~l~~~~~~~~~~~~~~~L--- 162 (693)
.++++...... ....+.....+ ..+.... ....+.++++|++|.+...... ..+....+
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iide~d~l~~~~~~--~~~~~~~l~~l 161 (287)
T d1w5sa2 84 AYVNAFNAPNLYTILSLIVRQTGYPIQVRGAPALDILKALVDNLYVENHYLLVILDEFQSMLSSPRI--AAEDLYTLLRV 161 (287)
T ss_dssp EEEEGGGCCSHHHHHHHHHHHHTCCCCCTTCCHHHHHHHHHHHHHHHTCEEEEEEESTHHHHSCTTS--CHHHHHHHHTH
T ss_pred EEECCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCC--CHHHHHHHHHH
T ss_conf 6303333465046788876530432333451278899999999985467665412578885156655--42678988999
Q ss_pred ----HHHHCCCCCEEEEEECHHHHHH-HHHCCHHHHCCCC-CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
Q ss_conf ----3311079817999743588985-4203988854678-311589999999999999999672203766685899999
Q 005511 163 ----KPSLARGELQCIGATTLDEYRK-HIEKDPALERRFQ-PVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSA 236 (693)
Q Consensus 163 ----~~~l~~~~i~iI~~t~~~~~~~-~~~l~~~l~~Rf~-~i~~~~p~~~e~~~il~~~~~~~~~~~~~~~~~~~l~~l 236 (693)
..........+|++++...... .....+++.+|+. .+.|++|+.+++.+|++..++.. ..+..++++++..+
T Consensus 162 ~~~l~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~r~~~~i~f~~y~~~el~~Il~~r~~~~--~~~~~~~~~al~~i 239 (287)
T d1w5sa2 162 HEEIPSRDGVNRIGFLLVASDVRALSYMREKIPQVESQIGFKLHLPAYKSRELYTILEQRAELG--LRDTVWEPRHLELI 239 (287)
T ss_dssp HHHSCCTTSCCBEEEEEEEEETHHHHHHHHHCHHHHTTCSEEEECCCCCHHHHHHHHHHHHHHH--BCTTSCCHHHHHHH
T ss_pred HHHCCHHHCCCCEEEEEECCCHHHHHHHHHHCCCHHCCCCEEEECCCCCHHHHHHHHHHHHHHH--HCCCCCCHHHHHHH
T ss_conf 8743201045651477624308999999862520112322065225775999999876667775--24687799999999
Q ss_pred HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 9864441004677034666999875688884
Q 005511 237 AQLSYQYISDRFLPDKAIDLIDEAGSRVRLR 267 (693)
Q Consensus 237 ~~~~~~~~~~~~~~~~a~~~l~~a~~~~~~~ 267 (693)
++++.++.+..+.+|.|+++++.|...+...
T Consensus 240 a~~~~~~~~~~gd~R~ai~~l~~a~~~A~~~ 270 (287)
T d1w5sa2 240 SDVYGEDKGGDGSARRAIVALKMACEMAEAM 270 (287)
T ss_dssp HHHHCGGGTSCCCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHC
T ss_conf 9997230367889999999999999999984
No 29
>d1d2na_ c.37.1.20 (A:) Hexamerization domain of N-ethylmalemide-sensitive fusion (NSF) protein {Chinese hamster (Cricetulus griseus) [TaxId: 10029]}
Probab=99.80 E-value=7.6e-19 Score=143.26 Aligned_cols=181 Identities=19% Similarity=0.182 Sum_probs=123.4
Q ss_pred CCCCCCCCCHHHHHHHHHHHH----------CCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCC
Q ss_conf 999876688899999999970----------3999980788899971999999999997559999988996699986521
Q 005511 39 GKLDPVVGRQPQIERVVQILG----------RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGL 108 (693)
Q Consensus 39 ~~~~~ivG~~~~~~~l~~~l~----------~~~~~~ilL~GppGtGKT~la~~la~~l~~~~~~~~~~~~~~~~~~~~~ 108 (693)
...+.+||+.+.++.++.... ..++.++||+||||||||++|+++|+++ +.+++.++++.
T Consensus 6 ~~~~~~i~~~~~i~~i~~~~~~~~~~~~~~~~~p~~~vLL~GppGtGKT~la~alA~~~----------~~~~~~i~~~~ 75 (246)
T d1d2na_ 6 YIMNGIIKWGDPVTRVLDDGELLVQQTKNSDRTPLVSVLLEGPPHSGKTALAAKIAEES----------NFPFIKICSPD 75 (246)
T ss_dssp TCTTCCCCCSHHHHHHHHHHHHHHHHHHHCSSCSEEEEEEECSTTSSHHHHHHHHHHHH----------TCSEEEEECGG
T ss_pred HHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHCC----------CCCCCCCCCCC
T ss_conf 62069847687999999999999999863688998079988969998899999986201----------00233345652
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHCCCC--CCHHHHHHHHHHHHCC-----CCCEEEEEECHHH
Q ss_conf 01397446618999999999997089849999160033108999--8847699988331107-----9817999743588
Q 005511 109 LVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAA--EGAIDAANILKPSLAR-----GELQCIGATTLDE 181 (693)
Q Consensus 109 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~iL~iDEid~l~~~~~~--~~~~~~~~~L~~~l~~-----~~i~iI~~t~~~~ 181 (693)
...+.. .+.....++.+|..+....|+||||||+|.+.+.... .......+.|...++. .++++|++||.+.
T Consensus 76 ~~~g~~-~~~~~~~i~~if~~A~~~~p~il~iDEid~l~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~~v~vi~tTn~~~ 154 (246)
T d1d2na_ 76 KMIGFS-ETAKCQAMKKIFDDAYKSQLSCVVVDDIERLLDYVPIGPRFSNLVLQALLVLLKKAPPQGRKLLIIGTTSRKD 154 (246)
T ss_dssp GCTTCC-HHHHHHHHHHHHHHHHTSSEEEEEECCHHHHTTCBTTTTBCCHHHHHHHHHHTTCCCSTTCEEEEEEEESCHH
T ss_pred CCCCCC-CCCHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHH
T ss_conf 235654-2112244444565555324222331025667651345441247899999998607776545014553248832
Q ss_pred HHHHHHCCH-HHHCCCC-CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
Q ss_conf 985420398-8854678-3115899999999999999996722037666858999999864441
Q 005511 182 YRKHIEKDP-ALERRFQ-PVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQY 243 (693)
Q Consensus 182 ~~~~~~l~~-~l~~Rf~-~i~~~~p~~~e~~~il~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~ 243 (693)
.+++ .+++||+ .+.+|.++ ++.+|++.+... ..+.+..+..++..+.+.
T Consensus 155 -----~ld~~~~~~rF~~~i~~P~~~--~r~~il~~l~~~------~~~~~~~~~~i~~~~~g~ 205 (246)
T d1d2na_ 155 -----VLQEMEMLNAFSTTIHVPNIA--TGEQLLEALELL------GNFKDKERTTIAQQVKGK 205 (246)
T ss_dssp -----HHHHTTCTTTSSEEEECCCEE--EHHHHHHHHHHH------TCSCHHHHHHHHHHHTTS
T ss_pred -----HCCCHHHCCCCCEEEECCCCH--HHHHHHHHHHHC------CCCCHHHHHHHHHHCCCC
T ss_conf -----256102018663388559910--599999999742------689868899999974899
No 30
>d1fnna2 c.37.1.20 (A:1-276) CDC6, N-domain {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}
Probab=99.77 E-value=6.6e-16 Score=123.04 Aligned_cols=220 Identities=16% Similarity=0.174 Sum_probs=146.2
Q ss_pred HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHC------CCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEE
Q ss_conf 4366543209998766888999999999703------9999807888999719999999999975599999889966999
Q 005511 30 TNLTKLAEEGKLDPVVGRQPQIERVVQILGR------RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVIT 103 (693)
Q Consensus 30 ~~l~~~~~~~~~~~ivG~~~~~~~l~~~l~~------~~~~~ilL~GppGtGKT~la~~la~~l~~~~~~~~~~~~~~~~ 103 (693)
.+|...|+| +.++|++.+++.+..++.. ..+++++|+||||||||++++.+++.+... ....+++
T Consensus 7 ~~l~~~y~p---~~l~~Re~ei~~l~~~l~~~l~~~~~~~~~lll~GppGtGKT~l~~~l~~~l~~~------~~~~~~~ 77 (276)
T d1fnna2 7 SVFSPSYVP---KRLPHREQQLQQLDILLGNWLRNPGHHYPRATLLGRPGTGKTVTLRKLWELYKDK------TTARFVY 77 (276)
T ss_dssp GGGSTTCCC---SCCTTCHHHHHHHHHHHHHHHHSTTSSCCEEEEECCTTSSHHHHHHHHHHHHTTS------CCCEEEE
T ss_pred CCCCCCCCC---CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHCC------CCCCEEE
T ss_conf 327987778---8788779999999999999985789888816888989998999999999997544------6885787
Q ss_pred EECCCCCC--------------CCCCCC-HHHHHHHHHHHHHH-HCCCEEEEEECCCHHHHCCCCCCHHHHHHHHHHH--
Q ss_conf 86521013--------------974466-18999999999997-0898499991600331089998847699988331--
Q 005511 104 LDMGLLVA--------------GTKYRG-EFEERLKKLMEEIK-QSDEIILFIDEVHTLIGAGAAEGAIDAANILKPS-- 165 (693)
Q Consensus 104 ~~~~~~~~--------------~~~~~g-~~~~~~~~~~~~~~-~~~~~iL~iDEid~l~~~~~~~~~~~~~~~L~~~-- 165 (693)
+++..... .....+ ........+..... .....++++|++|.+... .......+...
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~-----~~~~~~~~~~~~~ 152 (276)
T d1fnna2 78 INGFIYRNFTAIIGEIARSLNIPFPRRGLSRDEFLALLVEHLRERDLYMFLVLDDAFNLAPD-----ILSTFIRLGQEAD 152 (276)
T ss_dssp EETTTCCSHHHHHHHHHHHTTCCCCSSCCCHHHHHHHHHHHHHHTTCCEEEEEETGGGSCHH-----HHHHHHHHTTCHH
T ss_pred ECCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH-----HHHHHHHHHHCCC
T ss_conf 32300112466654567764334555325435789999998752065433203688875354-----3106888874044
Q ss_pred -HCCCCCEEEEEECHHHHHHHHHCCHHHHCCCC--CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
Q ss_conf -10798179997435889854203988854678--311589999999999999999672203766685899999986444
Q 005511 166 -LARGELQCIGATTLDEYRKHIEKDPALERRFQ--PVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQ 242 (693)
Q Consensus 166 -l~~~~i~iI~~t~~~~~~~~~~l~~~l~~Rf~--~i~~~~p~~~e~~~il~~~~~~~~~~~~~~~~~~~l~~l~~~~~~ 242 (693)
.....+.+|++++...... .+++++.+|+. .+.|++|+.+++.+|++..+... .....+++++++.+++.+..
T Consensus 153 ~~~~~~~~~i~~~~~~~~~~--~~~~~~~~r~~~~~i~~~~~~~~e~~~il~~r~~~~--~~~~~~~~~~l~~ia~~~~~ 228 (276)
T d1fnna2 153 KLGAFRIALVIVGHNDAVLN--NLDPSTRGIMGKYVIRFSPYTKDQIFDILLDRAKAG--LAEGSYSEDILQMIADITGA 228 (276)
T ss_dssp HHSSCCEEEEEEESSTHHHH--TSCHHHHHHHTTCEEECCCCBHHHHHHHHHHHHHHH--BCTTSSCHHHHHHHHHHHSB
T ss_pred CCCCCCEEEEECCCCHHHHH--HCCHHHHHHHCCHHCCCCCHHHHHHHHHHHHHHHHH--CCCCCCCHHHHHHHHHHHHH
T ss_conf 33565248862587645443--113036655110110344123888999999999985--24566637899999997001
Q ss_pred HHCC---CCCCHHHHHHHHHHHHHHHHH
Q ss_conf 1004---677034666999875688884
Q 005511 243 YISD---RFLPDKAIDLIDEAGSRVRLR 267 (693)
Q Consensus 243 ~~~~---~~~~~~a~~~l~~a~~~~~~~ 267 (693)
+... .+.+|.++++++.|...+...
T Consensus 229 ~~~~~~~~G~~R~a~~ll~~a~~~A~~~ 256 (276)
T d1fnna2 229 QTPLDTNRGDARLAIDILYRSAYAAQQN 256 (276)
T ss_dssp SSTTCTTSCCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHCCCCHHHHHHHHHHHHHHHHHC
T ss_conf 4446553899999999999999999981
No 31
>d1r7ra3 c.37.1.20 (A:471-735) Membrane fusion ATPase VCP/p97 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.77 E-value=1.2e-18 Score=141.84 Aligned_cols=204 Identities=21% Similarity=0.308 Sum_probs=136.0
Q ss_pred HCCCCCHHHHHHHHHHHHHHHHHC----CCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHH
Q ss_conf 525269389999999999997502----7899998438999515889279999999999639975405533543221000
Q 005511 375 HKRVIGQDEAVKAISRAIRRARVG----LKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHT 450 (693)
Q Consensus 375 ~~~i~Gq~~~i~~l~~~i~~~~~~----~~~~~~~~~~ill~Gp~GtGKt~lA~~la~~l~~~~~~~~~~~~~~~~~~~~ 450 (693)
+++|.|.+++++.+.+.+..+... ......+..++||+||||||||++|+++|..+ +.+++.++++.+..
T Consensus 6 f~di~G~~~~k~~l~~~i~~~l~~~~~~~~~g~~~~~giLL~Gp~GtGKT~l~~ala~~~---~~~~~~~~~~~l~~--- 79 (265)
T d1r7ra3 6 WEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANEC---QANFISIKGPELLT--- 79 (265)
T ss_dssp CSSCSSSSCCCCHHHHHTHHHHHCHHHHHHCCCCCCCEEEEBCCTTSSHHHHHHHHHHHT---TCEEEEECHHHHHT---
T ss_pred HHHHCCHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHH---CCCEEEEEHHHHHH---
T ss_conf 999667899999999999999639999986799988757887899876304778878771---89479988799525---
Q ss_pred HHHHCCCCCCCCCCCCC--CHHHHHHHCCCCEEEEECCCCCCCH--------------HHHHHHHHHHHCCEEECCCCCE
Q ss_conf 11002899987676751--2266999809998999846742298--------------8999999974056463799983
Q 005511 451 VSKLIGSPPGYVGYTEG--GQLTEAVRRRPYTVVLFDEIEKAHP--------------DVFNMMLQILEDGRLTDSKGRT 514 (693)
Q Consensus 451 ~~~l~g~~~~~~g~~~~--~~l~~~~~~~~~~vl~iDEid~l~~--------------~~~~~Ll~~le~g~~~~~~~~~ 514 (693)
.|.|..+. ..++..++...++||+|||+|.+.. .+.+.|+..|++-.
T Consensus 80 ---------~~~~~~~~~l~~~f~~A~~~~p~il~ideid~l~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~-------- 142 (265)
T d1r7ra3 80 ---------MWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMS-------- 142 (265)
T ss_dssp ---------SCTTTHHHHHHHHHHHHHHTCSEEEEESSGGGTCCHHHHCCCTTHHHHHHHHHHHHHTCC-----------
T ss_pred ---------CCCCCHHHHHHHHHHHHHHCCCCCEEHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC--------
T ss_conf ---------316515899999999998639843568754632455787678873799999999999962867--------
Q ss_pred EECCCEEEEEECCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHH--HCCCCEEECCCCCHHHHHH
Q ss_conf 31697699995388825664066544555676743111899998899998601763686--0359478747899999999
Q 005511 515 VDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFL--NRLDEMIVFRQLTKLEVKE 592 (693)
Q Consensus 515 ~~~~~~i~I~tsn~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~--~r~~~~i~f~~l~~~~~~~ 592 (693)
..+++++|+|||.... ++++|+ +||+..+.|++++.++..+
T Consensus 143 -~~~~v~vi~ttn~~~~------------------------------------ld~al~r~gRf~~~i~~~~p~~~~R~~ 185 (265)
T d1r7ra3 143 -TKKNVFIIGATNRPDI------------------------------------IDPAILRPGRLDQLIYIPLPDEKSRVA 185 (265)
T ss_dssp ----CCEEEECCBSCTT------------------------------------TSCGGGSSTTSEEEEECCCCCCHHHHH
T ss_pred -CCCCEEEEEECCCCHH------------------------------------CCHHHHCCCCCCEEEEECCHHHHHHHH
T ss_conf -7799899991799222------------------------------------799780787764799956607888999
Q ss_pred HHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 9999999999998309985983988999999804498899603799999998999999
Q 005511 593 IADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAE 650 (693)
Q Consensus 593 i~~~~l~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~g~r~l~~~i~~~i~~~l~~ 650 (693)
|++..+... .+.- +.-+..+++. ...+..++|...++.....++.+
T Consensus 186 il~~~l~~~---------~~~~-~~~l~~la~~--t~g~s~~di~~lv~~A~~~A~~~ 231 (265)
T d1r7ra3 186 ILKANLRKS---------PVAK-DVDLEFLAKM--TNGFSGADLTEICQRACKLAIRE 231 (265)
T ss_dssp HHHHHTTCC--------------CCCCHHHHHH--HCSSCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHCCC---------CCHH-HHHHHHHHHC--CCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 999996057---------7102-4368999825--89999999999999999999998
No 32
>d1njfa_ c.37.1.20 (A:) delta prime subunit of DNA polymerase III, N-domain {Escherichia coli [TaxId: 562]}
Probab=99.77 E-value=5.2e-18 Score=137.50 Aligned_cols=198 Identities=19% Similarity=0.288 Sum_probs=130.3
Q ss_pred HHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCC----CE-EEECCC
Q ss_conf 9999985252693899999999999975027899998438999515889279999999999639975----40-553354
Q 005511 369 KMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEE----AM-IRLDMS 443 (693)
Q Consensus 369 ~~~~~l~~~i~Gq~~~i~~l~~~i~~~~~~~~~~~~~~~~ill~Gp~GtGKt~lA~~la~~l~~~~~----~~-~~~~~~ 443 (693)
++++.-+++++||+++++.+...+...+ ..+++||+||||+|||++|+.+++.++.... ++ ...+|.
T Consensus 5 KyrP~~~~dlig~~~~~~~L~~~i~~~~--------~~~~~Ll~Gp~G~GKtt~a~~~~~~l~~~~~~~~~~~~~~~~~~ 76 (239)
T d1njfa_ 5 KWRPQTFADVVGQEHVLTALANGLSLGR--------IHHAYLFSGTRGVGKTSIARLLAKGLNCETGITATPCGVCDNCR 76 (239)
T ss_dssp HTCCSSGGGSCSCHHHHHHHHHHHHTTC--------CCSEEEEECSTTSSHHHHHHHHHHHHHCTTCSCSSCCSCSHHHH
T ss_pred HHCCCCHHHCCCHHHHHHHHHHHHHCCC--------CCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH
T ss_conf 3288989881595999999999998599--------87059888899875899999999984685566667555424799
Q ss_pred CCCCHHHHHHHCC-CCCCCCCCCCCCHHHHHHHC-------CCCEEEEECCCCCCCHHHHHHHHHHHHCCEEECCCCCEE
Q ss_conf 3221000110028-99987676751226699980-------999899984674229889999999740564637999833
Q 005511 444 EFMERHTVSKLIG-SPPGYVGYTEGGQLTEAVRR-------RPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTV 515 (693)
Q Consensus 444 ~~~~~~~~~~l~g-~~~~~~g~~~~~~l~~~~~~-------~~~~vl~iDEid~l~~~~~~~Ll~~le~g~~~~~~~~~~ 515 (693)
.+...... .++. ...+..+. ..+...... +...|++|||+|.++...|+.|++.||++
T Consensus 77 ~i~~~~~~-~~~~~~~~~~~~i---~~ir~~~~~~~~~~~~~~~kviiIde~d~l~~~~q~~Llk~lE~~---------- 142 (239)
T d1njfa_ 77 EIEQGRFV-DLIEIDAASRTKV---EDTRDLLDNVQYAPARGRFKVYLIDEVHMLSRHSFNALLKTLEEP---------- 142 (239)
T ss_dssp HHHHTCCT-TEEEEETTCSSSH---HHHHHHHHSCCCSCSSSSSEEEEEETGGGSCHHHHHHHHHHHHSC----------
T ss_pred HHHCCCCC-EEEEECCHHCCCH---HHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCC----------
T ss_conf 99747987-0799611200789---999999999974652599879999781108999999999998568----------
Q ss_pred ECCCEEEEEECCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHCCCCEEECCCCCHHHHHHHHH
Q ss_conf 16976999953888256640665445556767431118999988999986017636860359478747899999999999
Q 005511 516 DFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIAD 595 (693)
Q Consensus 516 ~~~~~i~I~tsn~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~r~~~~i~f~~l~~~~~~~i~~ 595 (693)
..+++||++||.... +.+++.+|| ..+.|++++.+++.+++.
T Consensus 143 -~~~~~~il~tn~~~~------------------------------------i~~~i~SRc-~~i~~~~~~~~~i~~~l~ 184 (239)
T d1njfa_ 143 -PEHVKFLLATTDPQK------------------------------------LPVTILSRC-LQFHLKALDVEQIRHQLE 184 (239)
T ss_dssp -CTTEEEEEEESCGGG------------------------------------SCHHHHTTS-EEEECCCCCHHHHHHHHH
T ss_pred -CCCEEEEEECCCCCC------------------------------------CCHHHHHHH-CCCCCCCCCHHHHHHHHH
T ss_conf -988699997388563------------------------------------676576121-022224676787666887
Q ss_pred HHHHHHHHHHHCCCCEEEECHHHHHHHHHHCCCCCCCCCHHHHHHH
Q ss_conf 9999999998309985983988999999804498899603799999
Q 005511 596 IMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIM 641 (693)
Q Consensus 596 ~~l~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~g~r~l~~~i~ 641 (693)
..+... + ..+++++++.+++.+ ..++++++.
T Consensus 185 ~i~~~e-------~--~~~~~~~l~~i~~~s------~Gd~R~ain 215 (239)
T d1njfa_ 185 HILNEE-------H--IAHEPRALQLLARAA------EGSLRDALS 215 (239)
T ss_dssp HHHHHH-------T--CCBCHHHHHHHHHHT------TTCHHHHHH
T ss_pred HHHHHH-------C--CCCCHHHHHHHHHHC------CCCHHHHHH
T ss_conf 877643-------1--478999999999976------997999999
No 33
>d1ixsb2 c.37.1.20 (B:4-242) Holliday junction helicase RuvB {Thermus thermophilus [TaxId: 274]}
Probab=99.77 E-value=1.1e-16 Score=128.34 Aligned_cols=181 Identities=15% Similarity=0.202 Sum_probs=129.6
Q ss_pred HHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHH
Q ss_conf 85252693899999999999975027899998438999515889279999999999639975405533543221000110
Q 005511 374 LHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSK 453 (693)
Q Consensus 374 l~~~i~Gq~~~i~~l~~~i~~~~~~~~~~~~~~~~ill~Gp~GtGKt~lA~~la~~l~~~~~~~~~~~~~~~~~~~~~~~ 453 (693)
-+++++||+++++.+..++..+... ..+.+++||+||||||||++|+++|+.+ +.++..++.+.....
T Consensus 7 ~~ddivGq~~~~~~L~~~i~~~~~~----~~~~~~~Ll~GPpG~GKTtla~~la~~~---~~~~~~~~~~~~~~~----- 74 (239)
T d1ixsb2 7 TLDEYIGQERLKQKLRVYLEAAKAR----KEPLEHLLLFGPPGLGKTTLAHVIAHEL---GVNLRVTSGPAIEKP----- 74 (239)
T ss_dssp SGGGSCSCHHHHHHHHHHHHHHTTS----SSCCCCEEEECCTTSCHHHHHHHHHHHH---TCCEEEEETTTCCSH-----
T ss_pred CHHHHCCHHHHHHHHHHHHHHHHHC----CCCCCEEEEECCCCCCHHHHHHHHHHHH---CCCEEECCCCCCCCC-----
T ss_conf 8889489899999999999978735----8888738988979987888999999984---987475468753432-----
Q ss_pred HCCCCCCCCCCCCCCHHHHHHHC--CCCEEEEECCCCCCCHHHHHHHHHHHHCCEEECC--C-----CCEEECCCEEEEE
Q ss_conf 02899987676751226699980--9998999846742298899999997405646379--9-----9833169769999
Q 005511 454 LIGSPPGYVGYTEGGQLTEAVRR--RPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDS--K-----GRTVDFKNTLLIM 524 (693)
Q Consensus 454 l~g~~~~~~g~~~~~~l~~~~~~--~~~~vl~iDEid~l~~~~~~~Ll~~le~g~~~~~--~-----~~~~~~~~~i~I~ 524 (693)
+.....+.. ..++|+++||+|++.+..++.++..++++..... . ......+++++++
T Consensus 75 --------------~~~~~~~~~~~~~~~i~~iDe~~~~~~~~~~~l~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 140 (239)
T d1ixsb2 75 --------------GDLAAILANSLEEGDILFIDEIHRLSRQAEEHLYPAMEDFVMDIVIGQGPAARTIRLELPRFTLIG 140 (239)
T ss_dssp --------------HHHHHHHHTTCCTTCEEEEETGGGCCHHHHHHHHHHHHHSEEEEECSCTTCCCEEEEECCCCEEEE
T ss_pred --------------HHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCEEEEE
T ss_conf --------------146899885103887344311001104478750012433321211046556543346899779996
Q ss_pred ECCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 53888256640665445556767431118999988999986017636860359478747899999999999999999999
Q 005511 525 TSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDR 604 (693)
Q Consensus 525 tsn~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~r~~~~i~f~~l~~~~~~~i~~~~l~~~~~~ 604 (693)
++|.... ..++.+.++...+.|.+++.+++.+++...+..
T Consensus 141 ~~~~~~~------------------------------------~~~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~---- 180 (239)
T d1ixsb2 141 ATTRPGL------------------------------------ITAPLLSRFGIVEHLEYYTPEELAQGVMRDARL---- 180 (239)
T ss_dssp EESCCSS------------------------------------CSCGGGGGCSEEEECCCCCHHHHHHHHHHHHGG----
T ss_pred ECCCCCC------------------------------------CCCHHHCCCCEEEEEECCCHHHHHHHHHHHHHH----
T ss_conf 3068333------------------------------------441010122145675205745555788999998----
Q ss_pred HHCCCCEEEECHHHHHHHHHH
Q ss_conf 830998598398899999980
Q 005511 605 LKTKDIELQVTERFRERVVEE 625 (693)
Q Consensus 605 ~~~~~~~l~~~~~~~~~l~~~ 625 (693)
..+.+++++.+.+++.
T Consensus 181 -----~~i~~~~~~l~~ia~~ 196 (239)
T d1ixsb2 181 -----LGVRITEEAALEIGRR 196 (239)
T ss_dssp -----GCCCBCHHHHHHHHHH
T ss_pred -----HCCCCCHHHHHHHHHH
T ss_conf -----4876526789999997
No 34
>d1r6bx3 c.37.1.20 (X:437-751) ClpA, an Hsp100 chaperone, AAA+ modules {Escherichia coli [TaxId: 562]}
Probab=99.75 E-value=4.2e-16 Score=124.37 Aligned_cols=198 Identities=20% Similarity=0.248 Sum_probs=138.2
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHC--------C-CCCCEEEECCCCCHHHHHHHHH
Q ss_conf 479999999741888874366543209998766888999999999703--------9-9998078889997199999999
Q 005511 13 VGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR--------R-TKNNPCLIGEPGVGKTAIAEGL 83 (693)
Q Consensus 13 ~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~ivG~~~~~~~l~~~l~~--------~-~~~~ilL~GppGtGKT~la~~l 83 (693)
|.++..++....|.+....|.+ .++||+++++.+...+.. . +..++||+||||||||.+|+.+
T Consensus 1 p~~~~~~~d~~~l~~l~~~L~~--------~viGQ~~a~~~v~~~v~~~~~~l~~~~~p~~~~lf~Gp~GvGKT~lak~l 72 (315)
T d1r6bx3 1 PEKSVSQSDRDTLKNLGDRLKM--------LVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQL 72 (315)
T ss_dssp CCCCSSSSHHHHHHHHHHHHTT--------TSCSCHHHHHHHHHHHHHHHTTCSCTTSCSEEEEEECSTTSSHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHCC--------EECCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCHHHHHHHHH
T ss_conf 9520027589999999998588--------06485999999999999997267888887658999778750069999999
Q ss_pred HHHHHCCCCCCCCCCCEEEEEECCCCCCCC----------CCCCHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHCCCCC
Q ss_conf 999755999998899669998652101397----------4466189999999999970898499991600331089998
Q 005511 84 AQRIASGDVPDTIEGKKVITLDMGLLVAGT----------KYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAE 153 (693)
Q Consensus 84 a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~g~~~~~~~~~~~~~~~~~~~iL~iDEid~l~~~~~~~ 153 (693)
|+.+ +.+++.++++.+.... .+.|.... ..+.......+.+++++||+|.+.
T Consensus 73 a~~l----------~~~~i~~d~s~~~~~~~~~~l~g~~~gy~g~~~~--~~l~~~~~~~~~~vvl~DeieKa~------ 134 (315)
T d1r6bx3 73 SKAL----------GIELLRFDMSEYMERHTVSRLIGAPPGYVGFDQG--GLLTDAVIKHPHAVLLLDEIEKAH------ 134 (315)
T ss_dssp HHHH----------TCEEEEEEGGGCSSSSCCSSSCCCCSCSHHHHHT--THHHHHHHHCSSEEEEEETGGGSC------
T ss_pred HHHC----------CCCEEEECCCCCCCHHHHHHHCCCCCCCCCCCCC--CHHHHHHHHCCCCHHHHCCCCCCC------
T ss_conf 8633----------6770674154445544666521467875011468--703377773854302212223016------
Q ss_pred CHHHHHHHHHHHHCCCC-------------CEEEEEECHHH----------------------HHHHHHCCHHHHCCCC-
Q ss_conf 84769998833110798-------------17999743588----------------------9854203988854678-
Q 005511 154 GAIDAANILKPSLARGE-------------LQCIGATTLDE----------------------YRKHIEKDPALERRFQ- 197 (693)
Q Consensus 154 ~~~~~~~~L~~~l~~~~-------------i~iI~~t~~~~----------------------~~~~~~l~~~l~~Rf~- 197 (693)
.++++.|+++++.|. .++|+++|-.. .. -.+.|.|.+|++
T Consensus 135 --~~V~~~lLqild~G~ltd~~Gr~vdf~n~iiI~Tsnig~~~i~~~~~~~~~~~~~~~~~~~l~--~~f~pEflnRid~ 210 (315)
T d1r6bx3 135 --PDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIK--KIFTPEFRNRLDN 210 (315)
T ss_dssp --HHHHHHHHHHHHHSEEEETTTEEEECTTEEEEEEECSSCC-----------------CHHHHH--HHSCHHHHTTCSE
T ss_pred --CHHHHHHHHHHCCCEECCCCCCCCCCCCEEEEECCCHHHHHHHHHHCCCHHHHHHHHHHHHHH--HHCCHHHHHHHHH
T ss_conf --337665677621460258899726863258884144016888862000005666676899999--7548989866321
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHH-----HHCCCCCCHHHHHHHHHHH
Q ss_conf 311589999999999999999672-----2037666858999999864
Q 005511 198 PVKVPEPSVDETIQILKGLRERYE-----IHHKLRYTDEALVSAAQLS 240 (693)
Q Consensus 198 ~i~~~~p~~~e~~~il~~~~~~~~-----~~~~~~~~~~~l~~l~~~~ 240 (693)
.+.|.+++.++..+|+...+..+. ....+.+++++++.++...
T Consensus 211 ii~f~~l~~~~~~~I~~~~l~~~~~~l~~~~i~l~~~~~a~~~l~~~~ 258 (315)
T d1r6bx3 211 IIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKG 258 (315)
T ss_dssp EEECCCCCHHHHHHHHHHHHHHHHHHHHHTTEEEEECHHHHHHHHHHH
T ss_pred HHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHC
T ss_conf 001363015589999999999999998764862202799999999967
No 35
>d1iqpa2 c.37.1.20 (A:2-232) Replication factor C {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=99.75 E-value=1.3e-17 Score=134.74 Aligned_cols=191 Identities=21% Similarity=0.338 Sum_probs=135.1
Q ss_pred HHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCC--CCCEEEECCCCCC
Q ss_conf 99999852526938999999999999750278999984389995158892799999999996399--7540553354322
Q 005511 369 KMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGS--EEAMIRLDMSEFM 446 (693)
Q Consensus 369 ~~~~~l~~~i~Gq~~~i~~l~~~i~~~~~~~~~~~~~~~~ill~Gp~GtGKt~lA~~la~~l~~~--~~~~~~~~~~~~~ 446 (693)
+++..-+++++||+.+++.+..++.... .+++||+||||+|||++|+++|+.+++. ...++.++++...
T Consensus 17 ky~P~~~~diig~~~~~~~l~~~i~~~~---------~~~lll~Gp~G~GKTtla~~iak~l~~~~~~~~~~e~n~s~~~ 87 (231)
T d1iqpa2 17 KYRPQRLDDIVGQEHIVKRLKHYVKTGS---------MPHLLFAGPPGVGKTTAALALARELFGENWRHNFLELNASDER 87 (231)
T ss_dssp HTCCCSTTTCCSCHHHHHHHHHHHHHTC---------CCEEEEESCTTSSHHHHHHHHHHHHHGGGHHHHEEEEETTCHH
T ss_pred HHCCCCHHHCCCCHHHHHHHHHHHHCCC---------CCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCC
T ss_conf 7589989991393999999999998599---------9769997899974879999999998731467771587567666
Q ss_pred CHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHCCEEECCCCCEEECCCEEEEEEC
Q ss_conf 10001100289998767675122669998099989998467422988999999974056463799983316976999953
Q 005511 447 ERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTS 526 (693)
Q Consensus 447 ~~~~~~~l~g~~~~~~g~~~~~~l~~~~~~~~~~vl~iDEid~l~~~~~~~Ll~~le~g~~~~~~~~~~~~~~~i~I~ts 526 (693)
........+... ............|+++||+|.+....++.|+..++.+ ..++++|+++
T Consensus 88 ~~~~~~~~~~~~----------~~~~~~~~~~~~iilide~d~~~~~~~~~ll~~l~~~-----------~~~~~~i~~~ 146 (231)
T d1iqpa2 88 GINVIREKVKEF----------ARTKPIGGASFKIIFLDEADALTQDAQQALRRTMEMF-----------SSNVRFILSC 146 (231)
T ss_dssp HHHTTHHHHHHH----------HHSCCGGGCSCEEEEEETGGGSCHHHHHHHHHHHHHT-----------TTTEEEEEEE
T ss_pred CHHHHHHHHHHH----------HHHHHCCCCCCEEEEEHHHHHCCHHHHHHHHHHCCCC-----------CCCEEEEECC
T ss_conf 634888888888----------7510015787228861434431214789876411247-----------7644788614
Q ss_pred CCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 88825664066544555676743111899998899998601763686035947874789999999999999999999983
Q 005511 527 NVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLK 606 (693)
Q Consensus 527 n~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~r~~~~i~f~~l~~~~~~~i~~~~l~~~~~~~~ 606 (693)
|.... +.+++.+|+ ..+.|.+++..++..++.+.+..
T Consensus 147 n~~~~------------------------------------i~~~l~sR~-~~i~~~~~~~~~~~~~l~~~~~~------ 183 (231)
T d1iqpa2 147 NYSSK------------------------------------IIEPIQSRC-AIFRFRPLRDEDIAKRLRYIAEN------ 183 (231)
T ss_dssp SCGGG------------------------------------SCHHHHHTE-EEEECCCCCHHHHHHHHHHHHHT------
T ss_pred CCHHH------------------------------------CHHHHHCCC-CCCCCCCCCHHHHHHHHHHHHHH------
T ss_conf 87665------------------------------------657684731-21012334304677899888998------
Q ss_pred CCCCEEEECHHHHHHHHHHCCCCCCCCCHHHHHHH
Q ss_conf 09985983988999999804498899603799999
Q 005511 607 TKDIELQVTERFRERVVEEGYNPSYGARPLRRAIM 641 (693)
Q Consensus 607 ~~~~~l~~~~~~~~~l~~~~~~~~~g~r~l~~~i~ 641 (693)
.+ +.+++++++.+++. ..+ +++.++.
T Consensus 184 -e~--i~i~~~~l~~I~~~-~~g-----diR~ai~ 209 (231)
T d1iqpa2 184 -EG--LELTEEGLQAILYI-AEG-----DMRRAIN 209 (231)
T ss_dssp -TT--CEECHHHHHHHHHH-HTT-----CHHHHHH
T ss_pred -HC--CCCCHHHHHHHHHH-CCC-----CHHHHHH
T ss_conf -39--99899999999998-399-----7999999
No 36
>d1sxjc2 c.37.1.20 (C:12-238) Replication factor C3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.74 E-value=2.4e-17 Score=132.89 Aligned_cols=186 Identities=20% Similarity=0.364 Sum_probs=132.0
Q ss_pred HHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCC--CEEEECCCCCC
Q ss_conf 9999985252693899999999999975027899998438999515889279999999999639975--40553354322
Q 005511 369 KMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEE--AMIRLDMSEFM 446 (693)
Q Consensus 369 ~~~~~l~~~i~Gq~~~i~~l~~~i~~~~~~~~~~~~~~~~ill~Gp~GtGKt~lA~~la~~l~~~~~--~~~~~~~~~~~ 446 (693)
+++..-+++++||+++++.+...+.... .+++||+||||+|||++|+++++.+++... .+...+.++..
T Consensus 7 kyrP~~~~divg~~~~~~~L~~~i~~~~---------~~~lLl~Gp~G~GKttl~~~la~~l~~~~~~~~~~e~~~~~~~ 77 (227)
T d1sxjc2 7 KYRPETLDEVYGQNEVITTVRKFVDEGK---------LPHLLFYGPPGTGKTSTIVALAREIYGKNYSNMVLELNASDDR 77 (227)
T ss_dssp HTCCSSGGGCCSCHHHHHHHHHHHHTTC---------CCCEEEECSSSSSHHHHHHHHHHHHHTTSHHHHEEEECTTSCC
T ss_pred HHCCCCHHHCCCCHHHHHHHHHHHHCCC---------CCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCC
T ss_conf 4588999983596999999999997699---------9859998899877558999999985167776415773155568
Q ss_pred CHHHHHHHCCCCCCCCCCCCCCHHHHHHH-----CCCCEEEEECCCCCCCHHHHHHHHHHHHCCEEECCCCCEEECCCEE
Q ss_conf 10001100289998767675122669998-----0999899984674229889999999740564637999833169769
Q 005511 447 ERHTVSKLIGSPPGYVGYTEGGQLTEAVR-----RRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTL 521 (693)
Q Consensus 447 ~~~~~~~l~g~~~~~~g~~~~~~l~~~~~-----~~~~~vl~iDEid~l~~~~~~~Ll~~le~g~~~~~~~~~~~~~~~i 521 (693)
...... ........ .....+++|||+|.+....++.|+..+++. ..+++
T Consensus 78 ~~~~~~---------------~~~~~~~~~~~~~~~~~kiiiiDe~d~~~~~~~~~Ll~~le~~-----------~~~~~ 131 (227)
T d1sxjc2 78 GIDVVR---------------NQIKDFASTRQIFSKGFKLIILDEADAMTNAAQNALRRVIERY-----------TKNTR 131 (227)
T ss_dssp SHHHHH---------------THHHHHHHBCCSSSCSCEEEEETTGGGSCHHHHHHHHHHHHHT-----------TTTEE
T ss_pred CEEEEE---------------CCHHHCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHC-----------CCCEE
T ss_conf 754321---------------0001011100025777189999663200023789999886311-----------20023
Q ss_pred EEEECCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHH
Q ss_conf 99953888256640665445556767431118999988999986017636860359478747899999999999999999
Q 005511 522 LIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEV 601 (693)
Q Consensus 522 ~I~tsn~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~r~~~~i~f~~l~~~~~~~i~~~~l~~~ 601 (693)
+++++|.... +.+++.+|| ..+.|.+++.+++.+++.+.+..
T Consensus 132 ~~~~~~~~~~------------------------------------i~~~i~sr~-~~i~~~~~~~~~i~~~l~~I~~~- 173 (227)
T d1sxjc2 132 FCVLANYAHK------------------------------------LTPALLSQC-TRFRFQPLPQEAIERRIANVLVH- 173 (227)
T ss_dssp EEEEESCGGG------------------------------------SCHHHHTTS-EEEECCCCCHHHHHHHHHHHHHT-
T ss_pred ECCCCCCHHH------------------------------------HHHHHHHHH-HHHCCCCCCCCCCCCCCCCCCCC-
T ss_conf 2012670877------------------------------------599999887-54012356520001102122111-
Q ss_pred HHHHHCCCCEEEECHHHHHHHHHHCCCCCCCCCHHHHHHH
Q ss_conf 9998309985983988999999804498899603799999
Q 005511 602 FDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIM 641 (693)
Q Consensus 602 ~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~g~r~l~~~i~ 641 (693)
.+ +.+++++++.+++.+ . ++++.++.
T Consensus 174 ------e~--i~i~~~~l~~i~~~s-~-----Gd~R~ain 199 (227)
T d1sxjc2 174 ------EK--LKLSPNAEKALIELS-N-----GDMRRVLN 199 (227)
T ss_dssp ------TT--CCBCHHHHHHHHHHH-T-----TCHHHHHH
T ss_pred ------CC--CCCCHHHHHHHHHHC-C-----CCHHHHHH
T ss_conf ------12--458989999999984-9-----96999999
No 37
>d1sxjb2 c.37.1.20 (B:7-230) Replication factor C4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.73 E-value=1e-16 Score=128.62 Aligned_cols=186 Identities=17% Similarity=0.265 Sum_probs=133.7
Q ss_pred HHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCC--CCEEEECCCCCC
Q ss_conf 999998525269389999999999997502789999843899951588927999999999963997--540553354322
Q 005511 369 KMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSE--EAMIRLDMSEFM 446 (693)
Q Consensus 369 ~~~~~l~~~i~Gq~~~i~~l~~~i~~~~~~~~~~~~~~~~ill~Gp~GtGKt~lA~~la~~l~~~~--~~~~~~~~~~~~ 446 (693)
+++..-+++++||+++++.+...+.... .+++||+||||+|||++|+.+++.+.+.. ..+..+++++..
T Consensus 8 KyrP~~~~d~ig~~~~~~~L~~~~~~~~---------~~~~ll~Gp~G~GKTt~a~~la~~l~~~~~~~~~~~~n~~~~~ 78 (224)
T d1sxjb2 8 KYRPQVLSDIVGNKETIDRLQQIAKDGN---------MPHMIISGMPGIGKTTSVHCLAHELLGRSYADGVLELNASDDR 78 (224)
T ss_dssp HTCCSSGGGCCSCTHHHHHHHHHHHSCC---------CCCEEEECSTTSSHHHHHHHHHHHHHGGGHHHHEEEECTTSCC
T ss_pred HHCCCCHHHHCCCHHHHHHHHHHHHCCC---------CCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
T ss_conf 7388989990297999999999998699---------8749998899987054699999997256643221111134557
Q ss_pred CHHHHHHHCCCCCCCCCCCCCCHHHHHHH------CCCCEEEEECCCCCCCHHHHHHHHHHHHCCEEECCCCCEEECCCE
Q ss_conf 10001100289998767675122669998------099989998467422988999999974056463799983316976
Q 005511 447 ERHTVSKLIGSPPGYVGYTEGGQLTEAVR------RRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNT 520 (693)
Q Consensus 447 ~~~~~~~l~g~~~~~~g~~~~~~l~~~~~------~~~~~vl~iDEid~l~~~~~~~Ll~~le~g~~~~~~~~~~~~~~~ 520 (693)
...... ..+..... .....++++||+|.+....++.|+..++.. ..++
T Consensus 79 ~~~~i~---------------~~~~~~~~~~~~~~~~~~kviiiDe~d~~~~~~~~~ll~~~e~~-----------~~~~ 132 (224)
T d1sxjb2 79 GIDVVR---------------NQIKHFAQKKLHLPPGKHKIVILDEADSMTAGAQQALRRTMELY-----------SNST 132 (224)
T ss_dssp SHHHHH---------------THHHHHHHBCCCCCTTCCEEEEEESGGGSCHHHHHTTHHHHHHT-----------TTTE
T ss_pred CCEEHH---------------HHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCC-----------CCCE
T ss_conf 852116---------------67887887622477763599998244323215778775201123-----------3333
Q ss_pred EEEEECCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHCCCCEEECCCCCHHHHHHHHHHHHHH
Q ss_conf 99995388825664066544555676743111899998899998601763686035947874789999999999999999
Q 005511 521 LLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 600 (693)
Q Consensus 521 i~I~tsn~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~r~~~~i~f~~l~~~~~~~i~~~~l~~ 600 (693)
+++++++.... +.+++.+|| ..+.|++++.+++..++...+..
T Consensus 133 ~~i~~~~~~~~------------------------------------i~~~l~sr~-~~i~~~~~~~~~i~~~l~~i~~~ 175 (224)
T d1sxjb2 133 RFAFACNQSNK------------------------------------IIEPLQSQC-AILRYSKLSDEDVLKRLLQIIKL 175 (224)
T ss_dssp EEEEEESCGGG------------------------------------SCHHHHTTS-EEEECCCCCHHHHHHHHHHHHHH
T ss_pred EEEECCCCHHH------------------------------------HHHHHHHHH-HHHHHCCCCHHHHHHHHHHHHHH
T ss_conf 66531474302------------------------------------106788777-77653133224567888777774
Q ss_pred HHHHHHCCCCEEEECHHHHHHHHHHCCCCCCCCCHHHHHHH
Q ss_conf 99998309985983988999999804498899603799999
Q 005511 601 VFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIM 641 (693)
Q Consensus 601 ~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~g~r~l~~~i~ 641 (693)
. + +.+++++++.+++.+ .++++.++.
T Consensus 176 e-------~--~~i~~~~l~~I~~~s------~Gd~R~ai~ 201 (224)
T d1sxjb2 176 E-------D--VKYTNDGLEAIIFTA------EGDMRQAIN 201 (224)
T ss_dssp H-------T--CCBCHHHHHHHHHHH------TTCHHHHHH
T ss_pred C-------C--CCCCHHHHHHHHHHC------CCCHHHHHH
T ss_conf 0-------4--678999999999986------996999999
No 38
>d1sxjd2 c.37.1.20 (D:26-262) Replication factor C2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.72 E-value=6e-17 Score=130.19 Aligned_cols=198 Identities=18% Similarity=0.284 Sum_probs=129.6
Q ss_pred HHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCC---CCCEEEECCCCCCCH
Q ss_conf 99852526938999999999999750278999984389995158892799999999996399---754055335432210
Q 005511 372 ETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGS---EEAMIRLDMSEFMER 448 (693)
Q Consensus 372 ~~l~~~i~Gq~~~i~~l~~~i~~~~~~~~~~~~~~~~ill~Gp~GtGKt~lA~~la~~l~~~---~~~~~~~~~~~~~~~ 448 (693)
..-+++++||+++++.+...+.... .++++|+||||+|||++++++++.+++. ......++.+.....
T Consensus 8 P~~~~diig~~~~~~~l~~~i~~~~---------~~~lll~Gp~G~GKTtl~~~i~~~l~~~~~~~~~~~~~~~~~~~~~ 78 (237)
T d1sxjd2 8 PKNLDEVTAQDHAVTVLKKTLKSAN---------LPHMLFYGPPGTGKTSTILALTKELYGPDLMKSRILELNASDERGI 78 (237)
T ss_dssp CSSTTTCCSCCTTHHHHHHHTTCTT---------CCCEEEECSTTSSHHHHHHHHHHHHHHHHHHTTSEEEECSSSCCCH
T ss_pred CCCHHHCCCCHHHHHHHHHHHHCCC---------CCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCHHHEECCCCCCC
T ss_conf 8978872693999999999998699---------8859998999998499999999997097633432122002113560
Q ss_pred HHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHCCEEECCCCCEEECCCEEEEEECCC
Q ss_conf 00110028999876767512266999809998999846742298899999997405646379998331697699995388
Q 005511 449 HTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNV 528 (693)
Q Consensus 449 ~~~~~l~g~~~~~~g~~~~~~l~~~~~~~~~~vl~iDEid~l~~~~~~~Ll~~le~g~~~~~~~~~~~~~~~i~I~tsn~ 528 (693)
......+......................+..|++|||+|.+....++.++..++.. ..+.++|++++.
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~viiiDe~d~l~~~~~~~l~~~~~~~-----------~~~~~~i~~~~~ 147 (237)
T d1sxjd2 79 SIVREKVKNFARLTVSKPSKHDLENYPCPPYKIIILDEADSMTADAQSALRRTMETY-----------SGVTRFCLICNY 147 (237)
T ss_dssp HHHTTHHHHHHHSCCCCCCTTHHHHSCCCSCEEEEETTGGGSCHHHHHHHHHHHHHT-----------TTTEEEEEEESC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHCCCCC-----------CCCCCCCCCCCC
T ss_conf 678999988765444324678776135667369999551336777788876301222-----------233332122466
Q ss_pred CHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 82566406654455567674311189999889999860176368603594787478999999999999999999998309
Q 005511 529 GSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTK 608 (693)
Q Consensus 529 ~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~r~~~~i~f~~l~~~~~~~i~~~~l~~~~~~~~~~ 608 (693)
... +.+++.+|| ..+.|.|++.+++..++...+.. .
T Consensus 148 ~~~------------------------------------~~~~l~sr~-~~i~f~~~~~~~~~~~L~~i~~~-------e 183 (237)
T d1sxjd2 148 VTR------------------------------------IIDPLASQC-SKFRFKALDASNAIDRLRFISEQ-------E 183 (237)
T ss_dssp GGG------------------------------------SCHHHHHHS-EEEECCCCCHHHHHHHHHHHHHT-------T
T ss_pred CCC------------------------------------CCCCCCCHH-HHHCCCCCCCCCCCHHHHHHHHH-------H
T ss_conf 422------------------------------------233111000-11023333332110010114555-------2
Q ss_pred CCEEEECHHHHHHHHHHCCCCCCCCCHHHHHHH
Q ss_conf 985983988999999804498899603799999
Q 005511 609 DIELQVTERFRERVVEEGYNPSYGARPLRRAIM 641 (693)
Q Consensus 609 ~~~l~~~~~~~~~l~~~~~~~~~g~r~l~~~i~ 641 (693)
+ +.+++++++++++.+ .+++|+++.
T Consensus 184 ~--i~i~~~~l~~ia~~s------~gd~R~ai~ 208 (237)
T d1sxjd2 184 N--VKCDDGVLERILDIS------AGDLRRGIT 208 (237)
T ss_dssp T--CCCCHHHHHHHHHHT------SSCHHHHHH
T ss_pred C--CCCCHHHHHHHHHHC------CCCHHHHHH
T ss_conf 6--757899999999985------998999999
No 39
>d1w44a_ c.37.1.11 (A:) NTPase P4 {Bacteriophage phi-12 [TaxId: 161736]}
Probab=99.71 E-value=1.4e-20 Score=155.25 Aligned_cols=185 Identities=16% Similarity=0.173 Sum_probs=130.2
Q ss_pred CCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCE-EEECCCCCHHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf 99741888874366543209998766888999999999703999980-78889997199999999999755999998899
Q 005511 20 NKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNP-CLIGEPGVGKTAIAEGLAQRIASGDVPDTIEG 98 (693)
Q Consensus 20 ~~~~~l~~~~~~l~~~~~~~~~~~ivG~~~~~~~l~~~l~~~~~~~i-lL~GppGtGKT~la~~la~~l~~~~~~~~~~~ 98 (693)
+....+..+..++.+..+....+.++|+......+.+.+....++++ ||+||||||||.+|+++|.++.. +
T Consensus 79 ~~~~~~~~~~~~L~~~a~~~~~d~v~~~~~~~~~~~~~~~~~~~~g~~l~~G~pG~GKT~la~ala~~~~~--------~ 150 (321)
T d1w44a_ 79 GSVSVVQVENGFMKQGHRGWLVDLTGELVGCSPVVAEFGGHRYASGMVIVTGKGNSGKTPLVHALGEALGG--------K 150 (321)
T ss_dssp SCEEEEEEETTEEEECCSEESSCSCTTCCSBCCEEEEETTEEEESEEEEEECSSSSCHHHHHHHHHHHHHT--------T
T ss_pred CCCCHHHHHHHHHHHHHHHCCCCHHCCCCCCCHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHCC--------C
T ss_conf 43235788873779998705723210544446188988614368863888779985088999999998637--------9
Q ss_pred CEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHCCCCCCH----HHHHHHHHHHHC----CCC
Q ss_conf 669998652101397446618999999999997089849999160033108999884----769998833110----798
Q 005511 99 KKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGA----IDAANILKPSLA----RGE 170 (693)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~iL~iDEid~l~~~~~~~~~----~~~~~~L~~~l~----~~~ 170 (693)
..++.++.+++. .+|.|+++.+++.+|..++. ++||||||+|.+.+.+..... ....+.|+..++ ...
T Consensus 151 ~~~~~~~~~~~~--~~~~G~~e~~~~~~f~~a~~--~~ilf~DEid~~~~~r~~~~~~~~~~r~v~~lL~e~dg~~~~~~ 226 (321)
T d1w44a_ 151 DKYATVRFGEPL--SGYNTDFNVFVDDIARAMLQ--HRVIVIDSLKNVIGAAGGNTTSGGISRGAFDLLSDIGAMAASRG 226 (321)
T ss_dssp SCCEEEEBSCSS--TTCBCCHHHHHHHHHHHHHH--CSEEEEECCTTTC-----------CCHHHHHHHHHHHHHHHHHT
T ss_pred CCEEEEEHHHHH--HCCCCHHHHHHHHHHHHHHH--CCEEEEEHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCC
T ss_conf 980897826854--42444578999999999862--65897410122212345678987413345156652035566788
Q ss_pred CEEEEEECHHHHHHHHHCCHHHHC--CCC-CCCCCCCCHHHHHHHHHHHHH
Q ss_conf 179997435889854203988854--678-311589999999999999999
Q 005511 171 LQCIGATTLDEYRKHIEKDPALER--RFQ-PVKVPEPSVDETIQILKGLRE 218 (693)
Q Consensus 171 i~iI~~t~~~~~~~~~~l~~~l~~--Rf~-~i~~~~p~~~e~~~il~~~~~ 218 (693)
+++|++||+..+.+ .+++++.+ ||. .+.++.|+.+.+.+|+.....
T Consensus 227 v~viaatN~~~~~~--~i~~~~~r~~Rf~~~v~v~~pd~~~r~~il~~~~~ 275 (321)
T d1w44a_ 227 CVVIASLNPTSNDD--KIVELVKEASRSNSTSLVISTDVDGEWQVLTRTGE 275 (321)
T ss_dssp CEEEEECCCCCCCH--HHHHHHHHHHHHSCSEEEEECSSTTEEEEEEECBT
T ss_pred EEEEEECCCCCCCC--CHHHHHHCCCCCCCEEECCCCCHHHHHHHHHHHCC
T ss_conf 49998379763531--01023336575554211589886789999998625
No 40
>d1d2na_ c.37.1.20 (A:) Hexamerization domain of N-ethylmalemide-sensitive fusion (NSF) protein {Chinese hamster (Cricetulus griseus) [TaxId: 10029]}
Probab=99.71 E-value=2.6e-17 Score=132.74 Aligned_cols=165 Identities=19% Similarity=0.260 Sum_probs=110.4
Q ss_pred HHHHCCCCCHHHHHHHHHHHHHHHHHCCC-CCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHH
Q ss_conf 99852526938999999999999750278-99998438999515889279999999999639975405533543221000
Q 005511 372 ETLHKRVIGQDEAVKAISRAIRRARVGLK-NPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHT 450 (693)
Q Consensus 372 ~~l~~~i~Gq~~~i~~l~~~i~~~~~~~~-~~~~~~~~ill~Gp~GtGKt~lA~~la~~l~~~~~~~~~~~~~~~~~~~~ 450 (693)
+++.+.++|+...++.+............ ....|..++||+||||||||++|+++|+.+ +.+|+.+++++...
T Consensus 5 ~~~~~~~i~~~~~i~~i~~~~~~~~~~~~~~~~~p~~~vLL~GppGtGKT~la~alA~~~---~~~~~~i~~~~~~~--- 78 (246)
T d1d2na_ 5 SYIMNGIIKWGDPVTRVLDDGELLVQQTKNSDRTPLVSVLLEGPPHSGKTALAAKIAEES---NFPFIKICSPDKMI--- 78 (246)
T ss_dssp TTCTTCCCCCSHHHHHHHHHHHHHHHHHHHCSSCSEEEEEEECSTTSSHHHHHHHHHHHH---TCSEEEEECGGGCT---
T ss_pred HHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHCC---CCCCCCCCCCCCCC---
T ss_conf 762069847687999999999999999863688998079988969998899999986201---00233345652235---
Q ss_pred HHHHCCCCCCCCCCCC---CCHHHHHHHCCCCEEEEECCCCCC----------CHHHHHHHHHHHHCCEEECCCCCEEEC
Q ss_conf 1100289998767675---122669998099989998467422----------988999999974056463799983316
Q 005511 451 VSKLIGSPPGYVGYTE---GGQLTEAVRRRPYTVVLFDEIEKA----------HPDVFNMMLQILEDGRLTDSKGRTVDF 517 (693)
Q Consensus 451 ~~~l~g~~~~~~g~~~---~~~l~~~~~~~~~~vl~iDEid~l----------~~~~~~~Ll~~le~g~~~~~~~~~~~~ 517 (693)
++.+... .+.++..+++.+++||||||+|++ ...+.+.|+..++.... ..
T Consensus 79 ---------g~~~~~~~~~i~~if~~A~~~~p~il~iDEid~l~~~~~~~~~~~~~~~~~ll~~l~~~~~--------~~ 141 (246)
T d1d2na_ 79 ---------GFSETAKCQAMKKIFDDAYKSQLSCVVVDDIERLLDYVPIGPRFSNLVLQALLVLLKKAPP--------QG 141 (246)
T ss_dssp ---------TCCHHHHHHHHHHHHHHHHTSSEEEEEECCHHHHTTCBTTTTBCCHHHHHHHHHHTTCCCS--------TT
T ss_pred ---------CCCCCCHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCC--------CC
T ss_conf ---------6542112244444565555324222331025667651345441247899999998607776--------54
Q ss_pred CCEEEEEECCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC-HHHHHCCCCEEECCCC-CHHHHHHHHH
Q ss_conf 9769999538882566406654455567674311189999889999860176-3686035947874789-9999999999
Q 005511 518 KNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFR-PEFLNRLDEMIVFRQL-TKLEVKEIAD 595 (693)
Q Consensus 518 ~~~i~I~tsn~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~l~~r~~~~i~f~~l-~~~~~~~i~~ 595 (693)
.++++|+|||.... ++ +.+.+||+..+.++.+ +.+++.+++.
T Consensus 142 ~~v~vi~tTn~~~~------------------------------------ld~~~~~~rF~~~i~~P~~~~r~~il~~l~ 185 (246)
T d1d2na_ 142 RKLLIIGTTSRKDV------------------------------------LQEMEMLNAFSTTIHVPNIATGEQLLEALE 185 (246)
T ss_dssp CEEEEEEEESCHHH------------------------------------HHHTTCTTTSSEEEECCCEEEHHHHHHHHH
T ss_pred CCEEEEECCCCHHH------------------------------------CCCHHHCCCCCEEEECCCCHHHHHHHHHHH
T ss_conf 50145532488322------------------------------------561020186633885599105999999997
No 41
>d1qvra3 c.37.1.20 (A:536-850) ClpB, AAA+ modules {Thermus thermophilus [TaxId: 274]}
Probab=99.71 E-value=7.1e-16 Score=122.83 Aligned_cols=199 Identities=23% Similarity=0.241 Sum_probs=135.6
Q ss_pred CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHC--------CCCC-CEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 99999741888874366543209998766888999999999703--------9999-80788899971999999999997
Q 005511 17 SSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGR--------RTKN-NPCLIGEPGVGKTAIAEGLAQRI 87 (693)
Q Consensus 17 ~~~~~~~~l~~~~~~l~~~~~~~~~~~ivG~~~~~~~l~~~l~~--------~~~~-~ilL~GppGtGKT~la~~la~~l 87 (693)
....+...|.+....|.+ .++||+.+++.+.+.+.. ..+. .+||+||+|+|||.+|+.+|+.+
T Consensus 6 ~~~~~~~~l~~l~~~L~~--------~v~GQ~~ai~~v~~~i~~~~~~l~~~~kp~~~~lf~Gp~G~GKt~lak~la~~l 77 (315)
T d1qvra3 6 LLEGEREKLLRLEEELHK--------RVVGQDEAIRAVADAIRRARAGLKDPNRPIGSFLFLGPTGVGKTELAKTLAATL 77 (315)
T ss_dssp TTCCHHHHHHSHHHHHHH--------HSCSCHHHHHHHHHHHHHHGGGCSCSSSCSEEEEEBSCSSSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCC--------EEECHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHH
T ss_conf 558799999999999568--------270879999999999999865789988876699997888624899999999983
Q ss_pred HCCCCCCCCCCCEEEEEECCCCCCC----------CCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHCCCCCCHHH
Q ss_conf 5599999889966999865210139----------744661899999999999708984999916003310899988476
Q 005511 88 ASGDVPDTIEGKKVITLDMGLLVAG----------TKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAID 157 (693)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~g~~~~~~~~~~~~~~~~~~~iL~iDEid~l~~~~~~~~~~~ 157 (693)
.. .+.+++.++++.+... ..|.|..+ -..+...+..++.+|+++||+|.+.+ +
T Consensus 78 ~~-------~~~~~~~~~~~~~~~~~~~~~L~g~~~gyvG~~~--~~~l~~~~~~~p~~Vvl~DEieK~~~--------~ 140 (315)
T d1qvra3 78 FD-------TEEAMIRIDMTEYMEKHAVSRLIGAPPGYVGYEE--GGQLTEAVRRRPYSVILFDEIEKAHP--------D 140 (315)
T ss_dssp HS-------SGGGEEEECTTTCCSSGGGGGC----------------CHHHHHHHCSSEEEEESSGGGSCH--------H
T ss_pred CC-------CCCCEEEEECCCCCCCHHHHHHCCCCCCCCCCCC--CCHHHHHHHHCCCCEEEEEHHHHCCH--------H
T ss_conf 58-------8753488731554542156651489998767466--78489999849983799714754078--------9
Q ss_pred HHHHHHHHHCCC-------------CCEEEEEECHHHH--------------------HH-HHHCCHHHHCCCC-CCCCC
Q ss_conf 999883311079-------------8179997435889--------------------85-4203988854678-31158
Q 005511 158 AANILKPSLARG-------------ELQCIGATTLDEY--------------------RK-HIEKDPALERRFQ-PVKVP 202 (693)
Q Consensus 158 ~~~~L~~~l~~~-------------~i~iI~~t~~~~~--------------------~~-~~~l~~~l~~Rf~-~i~~~ 202 (693)
+++.|+++++.| +.++|+++|-..- .. .-.+.|.|.+||+ .+.|.
T Consensus 141 v~~~ll~~l~~g~~~~~~gr~v~~~~~i~i~tsnlG~~~i~~~~~~~~~~~~~~~~~~~~l~~~f~pEflnRid~Ii~F~ 220 (315)
T d1qvra3 141 VFNILLQILDDGRLTDSHGRTVDFRNTVIILTSNLGSPLILEGLQKGWPYERIRDEVFKVLQQHFRPEFLNRLDEIVVFR 220 (315)
T ss_dssp HHHHHHHHHTTTEECCSSSCCEECTTEEEEEECCTTHHHHHHHHHTTCCHHHHHHHHHHHHHTTSCHHHHHTCSBCCBCC
T ss_pred HHHHHHHHHCCCCEECCCCCEECCCCEEEEEECCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHCCCEEEECC
T ss_conf 99899998613834279996853754289874245767776400112204555677888888623887872178054321
Q ss_pred CCCHHHHHHHHHHHHHHHH-----HHCCCCCCHHHHHHHHHHH
Q ss_conf 9999999999999999672-----2037666858999999864
Q 005511 203 EPSVDETIQILKGLRERYE-----IHHKLRYTDEALVSAAQLS 240 (693)
Q Consensus 203 ~p~~~e~~~il~~~~~~~~-----~~~~~~~~~~~l~~l~~~~ 240 (693)
+++.++..+|+...+.++. ....+.+++++++.++..+
T Consensus 221 ~L~~~~~~~I~~~~l~~l~~rl~~~~i~l~i~~~~~~~L~~~~ 263 (315)
T d1qvra3 221 PLTKEQIRQIVEIQLSYLRARLAEKRISLELTEAAKDFLAERG 263 (315)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHTTTCEEEECHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHC
T ss_conf 0245436899999999999998724202206699999999948
No 42
>d1um8a_ c.37.1.20 (A:) ClpX {Helicobacter pylori [TaxId: 210]}
Probab=99.70 E-value=2.8e-15 Score=118.69 Aligned_cols=203 Identities=23% Similarity=0.319 Sum_probs=137.5
Q ss_pred CCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH------------------------------CCCCCCEEEE
Q ss_conf 9974188887436654320999876688899999999970------------------------------3999980788
Q 005511 20 NKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG------------------------------RRTKNNPCLI 69 (693)
Q Consensus 20 ~~~~~l~~~~~~l~~~~~~~~~~~ivG~~~~~~~l~~~l~------------------------------~~~~~~ilL~ 69 (693)
++.|+..+.-..|.+. +|||+++++.+..+++ ..++.++||.
T Consensus 3 ~~~~tP~ei~~~L~~~--------ViGQd~Akkava~Avrn~~rR~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~niLfi 74 (364)
T d1um8a_ 3 SYIPAPKELKAVLDNY--------VIGQEQAKKVFSVAVYNHYKRLSFKEKLKKQDNQDSNVELEHLEEVELSKSNILLI 74 (364)
T ss_dssp SCCCCHHHHHHHHHTT--------CCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHCSHHHHHHHHHHHHTTCCCCCEEEE
T ss_pred CCCCCHHHHHHHHCCE--------ECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEE
T ss_conf 7798879999995896--------23808999999999998998887788764044443311112233456787532441
Q ss_pred CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCH-HHHHHHHHHHH----HHHCCCEEEEEECCC
Q ss_conf 8999719999999999975599999889966999865210139744661-89999999999----970898499991600
Q 005511 70 GEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGE-FEERLKKLMEE----IKQSDEIILFIDEVH 144 (693)
Q Consensus 70 GppGtGKT~la~~la~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~----~~~~~~~iL~iDEid 144 (693)
||+|||||.+|+++|+.+ +.+++.++++.+... .|.|. ....+..++.. +...+.+++++||++
T Consensus 75 GPTGvGKTElAk~LA~~~----------~~~~ir~D~s~~~e~-gyvg~dv~~~i~~l~~~~~~~v~~~~~~iv~lDEie 143 (364)
T d1um8a_ 75 GPTGSGKTLMAQTLAKHL----------DIPIAISDATSLTEA-GYVGEDVENILTRLLQASDWNVQKAQKGIVFIDEID 143 (364)
T ss_dssp CCTTSSHHHHHHHHHHHT----------TCCEEEEEGGGCC---------CTHHHHHHHHHTTTCHHHHTTSEEEEETGG
T ss_pred CCCCCCHHHHHHHHHHHC----------CCCEEEHHHHHCCCC-HHHHHHHCCCHHHHHHHCHHHHHHHHCCCCHHHHHH
T ss_conf 899863789999998644----------353311122201443-166763121034454202458998654630101666
Q ss_pred HHHHCCC------CCCHHHHHHHHHHHHCCCCC---------------EEEEEECH------------------------
Q ss_conf 3310899------98847699988331107981---------------79997435------------------------
Q 005511 145 TLIGAGA------AEGAIDAANILKPSLARGEL---------------QCIGATTL------------------------ 179 (693)
Q Consensus 145 ~l~~~~~------~~~~~~~~~~L~~~l~~~~i---------------~iI~~t~~------------------------ 179 (693)
...+... ...+.++++.|++.++.+.. .++.++|-
T Consensus 144 K~~~~s~~~~~~~d~a~~~V~~~lLqild~~~~~~~~~~gr~~~~~~~i~i~t~~i~~~~~ga~~~~~~~~~~~~~~~~~ 223 (364)
T d1um8a_ 144 KISRLSENRSITRDVSGEGVQQALLKIVEGSLVNIPPKGGRKHPEGNFIQIDTSDILFICAGAFDGLAEIIKKRTTQNVL 223 (364)
T ss_dssp GC--------------CHHHHHHHHHHHHCCEEC---------------CEECTTCEEEEEECCTTHHHHTTTSCSSCCC
T ss_pred HHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEECCCCCCCCCCCCCEEEEEEEHHHHHHHCCCCHHHHHHHHHHCCCCCC
T ss_conf 53134544555512214388986455405861225877787677641689961134554111310145665430144543
Q ss_pred ---------------------HHHHHHHHCCHHHHCCCC-CCCCCCCCHHHHHHHHHH----HHHHH---HHH--CCCCC
Q ss_conf ---------------------889854203988854678-311589999999999999----99967---220--37666
Q 005511 180 ---------------------DEYRKHIEKDPALERRFQ-PVKVPEPSVDETIQILKG----LRERY---EIH--HKLRY 228 (693)
Q Consensus 180 ---------------------~~~~~~~~l~~~l~~Rf~-~i~~~~p~~~e~~~il~~----~~~~~---~~~--~~~~~ 228 (693)
.+.. ...+.|.|..|++ .+.|.+++.++..+|+.. +.+++ ... -.+.+
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~f~PEf~gRi~~iv~f~~L~~~~l~~Il~~~~~~l~kq~~~~l~~~gi~L~~ 302 (364)
T d1um8a_ 224 GFTQEKMSKKEQEAILHLVQTHDLV-TYGLIPELIGRLPVLSTLDSISLEAMVDILQKPKNALIKQYQQLFKMDEVDLIF 302 (364)
T ss_dssp SCCCSSCCTTTTTTSGGGCCHHHHH-HTTCCHHHHTTCCEEEECCCCCHHHHHHHHHSSTTCHHHHHHHHHHTTTCEEEE
T ss_pred CCCCCCCCHHHHHHHHCCCCHHHHH-HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE
T ss_conf 1000110012466653024578776-530079999872301557402099999999879999999999998757927999
Q ss_pred CHHHHHHHHHHHHH
Q ss_conf 85899999986444
Q 005511 229 TDEALVSAAQLSYQ 242 (693)
Q Consensus 229 ~~~~l~~l~~~~~~ 242 (693)
++++++.++..+..
T Consensus 303 td~a~~~la~~g~d 316 (364)
T d1um8a_ 303 EEEAIKEIAQLALE 316 (364)
T ss_dssp CHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHCCC
T ss_conf 89999999995658
No 43
>d1sxje2 c.37.1.20 (E:4-255) Replication factor C5 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.69 E-value=1.4e-15 Score=120.73 Aligned_cols=198 Identities=18% Similarity=0.248 Sum_probs=125.3
Q ss_pred HHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHH
Q ss_conf 85252693899999999999975027899998438999515889279999999999639975405533543221000110
Q 005511 374 LHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSK 453 (693)
Q Consensus 374 l~~~i~Gq~~~i~~l~~~i~~~~~~~~~~~~~~~~ill~Gp~GtGKt~lA~~la~~l~~~~~~~~~~~~~~~~~~~~~~~ 453 (693)
-+++++|++.+++.+...+... ..+ +++||+||||||||++|+.+++.++.........++...........
T Consensus 9 ~~~diig~~~~~~~L~~~~~~~-------~~~-~~lll~Gp~G~GKTt~~~~la~~l~~~~~~~~~~~~~~~~~~~~~~~ 80 (252)
T d1sxje2 9 SLNALSHNEELTNFLKSLSDQP-------RDL-PHLLLYGPNGTGKKTRCMALLESIFGPGVYRLKIDVRQFVTASNRKL 80 (252)
T ss_dssp SGGGCCSCHHHHHHHHTTTTCT-------TCC-CCEEEECSTTSSHHHHHHTHHHHHSCTTCCC----------------
T ss_pred CHHHCCCCHHHHHHHHHHHHCC-------CCC-CEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHH
T ss_conf 7988358399999999999769-------987-85998899999889999999976227642222212344434666311
Q ss_pred HCCC---------CCCCCCCCCCCHHHHH-----------------HHCCCCEEEEECCCCCCCHHHHHHHHHHHHCCEE
Q ss_conf 0289---------9987676751226699-----------------9809998999846742298899999997405646
Q 005511 454 LIGS---------PPGYVGYTEGGQLTEA-----------------VRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRL 507 (693)
Q Consensus 454 l~g~---------~~~~~g~~~~~~l~~~-----------------~~~~~~~vl~iDEid~l~~~~~~~Ll~~le~g~~ 507 (693)
.+.. .....+.......... .......+++|||+|.++...++.|+..++.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iiiide~d~l~~~~~~~l~~~~e~--- 157 (252)
T d1sxje2 81 ELNVVSSPYHLEITPSDMGNNDRIVIQELLKEVAQMEQVDFQDSKDGLAHRYKCVIINEANSLTKDAQAALRRTMEK--- 157 (252)
T ss_dssp --CCEECSSEEEECCC----CCHHHHHHHHHHHTTTTC------------CCEEEEEECTTSSCHHHHHHHHHHHHH---
T ss_pred HHHHCCCCCCCEEEECCCCCCCCCEEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCHHHHCCCCC---
T ss_conf 22110477631000010445775224310223434331001211466678724999424333454311122100221---
Q ss_pred ECCCCCEEECCCEEEEEECCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHCCCCEEECCCCCH
Q ss_conf 37999833169769999538882566406654455567674311189999889999860176368603594787478999
Q 005511 508 TDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTK 587 (693)
Q Consensus 508 ~~~~~~~~~~~~~i~I~tsn~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~r~~~~i~f~~l~~ 587 (693)
...++.||++||.... +.+++.+|| ..+.|+|++.
T Consensus 158 --------~~~~~~~Il~tn~~~~------------------------------------i~~~l~sR~-~~i~~~~~~~ 192 (252)
T d1sxje2 158 --------YSKNIRLIMVCDSMSP------------------------------------IIAPIKSQC-LLIRCPAPSD 192 (252)
T ss_dssp --------STTTEEEEEEESCSCS------------------------------------SCHHHHTTS-EEEECCCCCH
T ss_pred --------CCCCCCCEEEECCCCC------------------------------------HHHHHHCCH-HEEEECCCCH
T ss_conf --------3566430001021110------------------------------------025442100-0243035330
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHCCCCCCCCCHHHHHHH
Q ss_conf 999999999999999998309985983988999999804498899603799999
Q 005511 588 LEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIM 641 (693)
Q Consensus 588 ~~~~~i~~~~l~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~g~r~l~~~i~ 641 (693)
+++.+++...+... ++.+ .++++++.++.. .. +++|+++.
T Consensus 193 ~~~~~~l~~i~~~e-------~~~~-~~~~~l~~i~~~-s~-----Gd~R~ai~ 232 (252)
T d1sxje2 193 SEISTILSDVVTNE-------RIQL-ETKDILKRIAQA-SN-----GNLRVSLL 232 (252)
T ss_dssp HHHHHHHHHHHHHH-------TCEE-CCSHHHHHHHHH-HT-----TCHHHHHH
T ss_pred HHHHHHHHHHHHHC-------CCCC-CCHHHHHHHHHH-CC-----CCHHHHHH
T ss_conf 46899999999983-------9998-969999999998-69-----94999999
No 44
>d1a5ta2 c.37.1.20 (A:1-207) delta prime subunit of DNA polymerase III, N-domain {Escherichia coli [TaxId: 562]}
Probab=99.67 E-value=1.1e-15 Score=121.62 Aligned_cols=186 Identities=11% Similarity=0.084 Sum_probs=111.2
Q ss_pred CCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHH-------
Q ss_conf 6938999999999999750278999984389995158892799999999996399754055335432210001-------
Q 005511 379 IGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTV------- 451 (693)
Q Consensus 379 ~Gq~~~i~~l~~~i~~~~~~~~~~~~~~~~ill~Gp~GtGKt~lA~~la~~l~~~~~~~~~~~~~~~~~~~~~------- 451 (693)
.|++.+.+.+...+...+ ..+.+||+||+|+|||++|+.+|+.+++...... -.|.........
T Consensus 5 Pw~~~~~~~l~~~~~~~~--------l~h~lLl~Gp~G~GKtt~a~~~a~~l~~~~~~~~-~~~~~~~~~~~i~~~~~~~ 75 (207)
T d1a5ta2 5 PWLRPDFEKLVASYQAGR--------GHHALLIQALPGMGDDALIYALSRYLLCQQPQGH-KSCGHCRGCQLMQAGTHPD 75 (207)
T ss_dssp GGGHHHHHHHHHHHHTTC--------CCSEEEEECCTTSCHHHHHHHHHHHHTCSSCBTT-BCCSCSHHHHHHHHTCCTT
T ss_pred CCCHHHHHHHHHHHHCCC--------CCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCC-CCCCCCCHHHHHHHCCCCC
T ss_conf 121999999999998599--------6737988899987599999999982101012321-2233420155654303431
Q ss_pred -HHHCCCC-CCCCCCCCCCHHHHHHHC----CCCEEEEECCCCCCCHHHHHHHHHHHHCCEEECCCCCEEECCCEEEEEE
Q ss_conf -1002899-987676751226699980----9998999846742298899999997405646379998331697699995
Q 005511 452 -SKLIGSP-PGYVGYTEGGQLTEAVRR----RPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT 525 (693)
Q Consensus 452 -~~l~g~~-~~~~g~~~~~~l~~~~~~----~~~~vl~iDEid~l~~~~~~~Ll~~le~g~~~~~~~~~~~~~~~i~I~t 525 (693)
..+.... .........+.+...+.. +...|++|||+|.+....+++|++.||+ +..+++||++
T Consensus 76 ~~~~~~~~~~~~i~~~~ir~l~~~~~~~~~~~~~kviIide~d~l~~~a~n~Llk~lEe-----------p~~~~~fIl~ 144 (207)
T d1a5ta2 76 YYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKTLEE-----------PPAETWFFLA 144 (207)
T ss_dssp EEEECCCTTCSSBCHHHHHHHHHHTTSCCTTSSCEEEEESCGGGBCHHHHHHHHHHHTS-----------CCTTEEEEEE
T ss_pred CCHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHH-----------HCCCCEEEEE
T ss_conf 10123431345333211467765321100357640477313442000014999999985-----------0111104553
Q ss_pred CCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 38882566406654455567674311189999889999860176368603594787478999999999999999999998
Q 005511 526 SNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRL 605 (693)
Q Consensus 526 sn~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~r~~~~i~f~~l~~~~~~~i~~~~l~~~~~~~ 605 (693)
||.... +.+.+.+|| ..+.|.+++.+++..++...
T Consensus 145 t~~~~~------------------------------------ll~tI~SRc-~~i~~~~~~~~~~~~~L~~~-------- 179 (207)
T d1a5ta2 145 TREPER------------------------------------LLATLRSRC-RLHYLAPPPEQYAVTWLSRE-------- 179 (207)
T ss_dssp ESCGGG------------------------------------SCHHHHTTS-EEEECCCCCHHHHHHHHHHH--------
T ss_pred ECCHHH------------------------------------HHHHHCCEE-EEEECCCCCHHHHHHHHHHC--------
T ss_conf 068655------------------------------------103200215-78826899999999999974--------
Q ss_pred HCCCCEEEECHHHHHHHHHHCCCCCCCCCHHHHHHH
Q ss_conf 309985983988999999804498899603799999
Q 005511 606 KTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIM 641 (693)
Q Consensus 606 ~~~~~~l~~~~~~~~~l~~~~~~~~~g~r~l~~~i~ 641 (693)
..+++++...+++. +.++++.++.
T Consensus 180 ------~~~~~~~~~~i~~~------s~Gs~r~al~ 203 (207)
T d1a5ta2 180 ------VTMSQDALLAALRL------SAGSPGAALA 203 (207)
T ss_dssp ------CCCCHHHHHHHHHH------TTTCHHHHHH
T ss_pred ------CCCCHHHHHHHHHH------CCCCHHHHHH
T ss_conf ------89999999999997------6999999999
No 45
>d1g8pa_ c.37.1.20 (A:) ATPase subunit of magnesium chelatase, BchI {Rhodobacter capsulatus [TaxId: 1061]}
Probab=99.67 E-value=1.3e-15 Score=121.08 Aligned_cols=170 Identities=17% Similarity=0.240 Sum_probs=99.2
Q ss_pred HCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCC-------
Q ss_conf 5252693899999999999975027899998438999515889279999999999639975405533543221-------
Q 005511 375 HKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFME------- 447 (693)
Q Consensus 375 ~~~i~Gq~~~i~~l~~~i~~~~~~~~~~~~~~~~ill~Gp~GtGKt~lA~~la~~l~~~~~~~~~~~~~~~~~------- 447 (693)
|..|+||+.++..+..++-.. + .+|+||.||||||||++|+.++..+- ++..+....+..
T Consensus 6 f~~I~Gq~~~kral~laa~~~--~-------~h~vLl~G~pG~GKT~lar~~~~iLp----~~~~~~~~~~~~~~~~~~~ 72 (333)
T d1g8pa_ 6 FSAIVGQEDMKLALLLTAVDP--G-------IGGVLVFGDRGTGKSTAVRALAALLP----EIEAVEGCPVSSPNVEMIP 72 (333)
T ss_dssp GGGSCSCHHHHHHHHHHHHCG--G-------GCCEEEECCGGGCTTHHHHHHHHHSC----CEEEETTCTTCCSSGGGSC
T ss_pred HHHCCCCHHHHHHHHHHHHCC--C-------CCEEEEECCCCCCHHHHHHHHHHHCC----CCHHHCCCCCCCCCCCCCC
T ss_conf 514069499999999997646--9-------97089988998529999999987379----8215405753467534462
Q ss_pred ----------------------HHHHHHHCCCCCC----CCCCCCCCHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHH
Q ss_conf ----------------------0001100289998----76767512266999809998999846742298899999997
Q 005511 448 ----------------------RHTVSKLIGSPPG----YVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQI 501 (693)
Q Consensus 448 ----------------------~~~~~~l~g~~~~----~~g~~~~~~l~~~~~~~~~~vl~iDEid~l~~~~~~~Ll~~ 501 (693)
..+...++|+... ..|. ...-.+.+..+.++|+|+||++++++.++++|++.
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~~~~g~--~~~~~G~l~~A~~gvl~iDEi~~~~~~~~~aLl~~ 150 (333)
T d1g8pa_ 73 DWATVLSTNVIRKPTPVVDLPLGVSEDRVVGALDIERAISKGE--KAFEPGLLARANRGYLYIDECNLLEDHIVDLLLDV 150 (333)
T ss_dssp TTCCCSCCCEEEECCCEEEECTTCCHHHHHCEECHHHHHHHCG--GGEECCHHHHHTTEEEEETTGGGSCHHHHHHHHHH
T ss_pred CHHHCCCCCCCCCCCCEEECCCCCCCCCCCCCCHHHHCCCCCC--CEEECCCCCCCCCCEEECCCHHHHHHHHHHHHHHH
T ss_conf 0220124575212375242367788543557410211023686--02202531135563763153777779999987445
Q ss_pred HHCCEEECCC-CCEEECC-CEEEEEECCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHCCCCE
Q ss_conf 4056463799-9833169-7699995388825664066544555676743111899998899998601763686035947
Q 005511 502 LEDGRLTDSK-GRTVDFK-NTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEM 579 (693)
Q Consensus 502 le~g~~~~~~-~~~~~~~-~~i~I~tsn~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~r~~~~ 579 (693)
||++.++... |..+.++ ++++++|+|.... .+++++++||+..
T Consensus 151 me~~~v~i~r~g~~~~~p~~f~liaa~Np~~~-----------------------------------~l~~~llDRf~~~ 195 (333)
T d1g8pa_ 151 AQSGENVVERDGLSIRHPARFVLVGSGNPEEG-----------------------------------DLRPQLLDRFGLS 195 (333)
T ss_dssp HHHSEEEECCTTCCEEEECCEEEEEEECSCSC-----------------------------------CCCHHHHTTCSEE
T ss_pred HCCCEEEECCCCCEECCCCCEEEEEECCCCCC-----------------------------------CCCCCHHHHHCCE
T ss_conf 30776875135843048888799984576312-----------------------------------3663103241334
Q ss_pred EECCCC-CHHHHHHHH
Q ss_conf 874789-999999999
Q 005511 580 IVFRQL-TKLEVKEIA 594 (693)
Q Consensus 580 i~f~~l-~~~~~~~i~ 594 (693)
+.+..+ +.+...++.
T Consensus 196 i~v~~~~~~~~~~~~~ 211 (333)
T d1g8pa_ 196 VEVLSPRDVETRVEVI 211 (333)
T ss_dssp EECCCCCSHHHHHHHH
T ss_pred EECCCCCHHHHHHHHH
T ss_conf 4326864035788877
No 46
>d1a5ta2 c.37.1.20 (A:1-207) delta prime subunit of DNA polymerase III, N-domain {Escherichia coli [TaxId: 562]}
Probab=99.66 E-value=6.1e-15 Score=116.40 Aligned_cols=180 Identities=18% Similarity=0.179 Sum_probs=128.0
Q ss_pred CCCHHHHHHHHHHHHCCCCCC-EEEECCCCCHHHHHHHHHHHHHHCCCCCCC--------------CCCCEEEEEECCCC
Q ss_conf 688899999999970399998-078889997199999999999755999998--------------89966999865210
Q 005511 45 VGRQPQIERVVQILGRRTKNN-PCLIGEPGVGKTAIAEGLAQRIASGDVPDT--------------IEGKKVITLDMGLL 109 (693)
Q Consensus 45 vG~~~~~~~l~~~l~~~~~~~-ilL~GppGtGKT~la~~la~~l~~~~~~~~--------------~~~~~~~~~~~~~~ 109 (693)
-+++...+.+...+.....+| +||+||||+|||++|+.+|+.+.+...... .....++.+....-
T Consensus 5 Pw~~~~~~~l~~~~~~~~l~h~lLl~Gp~G~GKtt~a~~~a~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 84 (207)
T d1a5ta2 5 PWLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAGTHPDYYTLAPEKG 84 (207)
T ss_dssp GGGHHHHHHHHHHHHTTCCCSEEEEECCTTSCHHHHHHHHHHHHTCSSCBTTBCCSCSHHHHHHHHTCCTTEEEECCCTT
T ss_pred CCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHC
T ss_conf 12199999999999859967379888999875999999999821010123212233420155654303431101234313
Q ss_pred CCCCCCCCHHHHHHHHHHHHHH----HCCCEEEEEECCCHHHHCCCCCCHHHHHHHHHHHHCC--CCCEEEEEECHHHHH
Q ss_conf 1397446618999999999997----0898499991600331089998847699988331107--981799974358898
Q 005511 110 VAGTKYRGEFEERLKKLMEEIK----QSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLAR--GELQCIGATTLDEYR 183 (693)
Q Consensus 110 ~~~~~~~g~~~~~~~~~~~~~~----~~~~~iL~iDEid~l~~~~~~~~~~~~~~~L~~~l~~--~~i~iI~~t~~~~~~ 183 (693)
. .......++.+...+. .+...+++|||+|.+.. +.++.|++.+|. ..+.+|++|+...
T Consensus 85 ---~--~~i~~~~ir~l~~~~~~~~~~~~~kviIide~d~l~~--------~a~n~Llk~lEep~~~~~fIl~t~~~~-- 149 (207)
T d1a5ta2 85 ---K--NTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTD--------AAANALLKTLEEPPAETWFFLATREPE-- 149 (207)
T ss_dssp ---C--SSBCHHHHHHHHHHTTSCCTTSSCEEEEESCGGGBCH--------HHHHHHHHHHTSCCTTEEEEEEESCGG--
T ss_pred ---C--CCCCCCHHHHHHHHHHHCCCCCCCCEEEECHHHHHHH--------HHHHHHHHHHHHHCCCCEEEEEECCHH--
T ss_conf ---4--5333211467765321100357640477313442000--------014999999985011110455306865--
Q ss_pred HHHHCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHH
Q ss_conf 54203988854678311589999999999999999672203766685899999986444100467703466699
Q 005511 184 KHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLI 257 (693)
Q Consensus 184 ~~~~l~~~l~~Rf~~i~~~~p~~~e~~~il~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~a~~~l 257 (693)
.+.++++|||..+.|++|+.++...+++. ...++++.+..++..+.|.+ |.|+.++
T Consensus 150 ---~ll~tI~SRc~~i~~~~~~~~~~~~~L~~---------~~~~~~~~~~~i~~~s~Gs~------r~al~~l 205 (207)
T d1a5ta2 150 ---RLLATLRSRCRLHYLAPPPEQYAVTWLSR---------EVTMSQDALLAALRLSAGSP------GAALALF 205 (207)
T ss_dssp ---GSCHHHHTTSEEEECCCCCHHHHHHHHHH---------HCCCCHHHHHHHHHHTTTCH------HHHHHTT
T ss_pred ---HHHHHHCCEEEEEECCCCCHHHHHHHHHH---------CCCCCHHHHHHHHHHCCCCH------HHHHHHH
T ss_conf ---51032002157882689999999999997---------48999999999999769999------9999985
No 47
>d1sxja2 c.37.1.20 (A:295-547) Replication factor C1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.65 E-value=1.5e-15 Score=120.61 Aligned_cols=208 Identities=14% Similarity=0.108 Sum_probs=127.5
Q ss_pred HHHHHHCCCCCHHHHHHHHHHHHHHHHHC--------CCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEC
Q ss_conf 99998525269389999999999997502--------7899998438999515889279999999999639975405533
Q 005511 370 MEETLHKRVIGQDEAVKAISRAIRRARVG--------LKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLD 441 (693)
Q Consensus 370 ~~~~l~~~i~Gq~~~i~~l~~~i~~~~~~--------~~~~~~~~~~ill~Gp~GtGKt~lA~~la~~l~~~~~~~~~~~ 441 (693)
+++..+++++|++..++.|...+..+... ...+..+..+++|+||||||||++|+++|+.+ +..+..++
T Consensus 8 y~P~~~~dlig~~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~lll~GPpG~GKTt~a~~la~~~---~~~~~~~~ 84 (253)
T d1sxja2 8 YAPTNLQQVCGNKGSVMKLKNWLANWENSKKNSFKHAGKDGSGVFRAAMLYGPPGIGKTTAAHLVAQEL---GYDILEQN 84 (253)
T ss_dssp TCCSSGGGCCSCHHHHHHHHHHHHTHHHHHHTTTCCCCTTSTTSCSEEEEECSTTSSHHHHHHHHHHHT---TCEEEEEC
T ss_pred CCCCCHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHH---HHHHHCCC
T ss_conf 689999996698999999999999625300234323202578887449998799998889999999998---75120134
Q ss_pred CCCCCCHHHHHHHCCCCCCCCCC--CCCCHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHCCEEECCCCCEEECCC
Q ss_conf 54322100011002899987676--7512266999809998999846742298899999997405646379998331697
Q 005511 442 MSEFMERHTVSKLIGSPPGYVGY--TEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKN 519 (693)
Q Consensus 442 ~~~~~~~~~~~~l~g~~~~~~g~--~~~~~l~~~~~~~~~~vl~iDEid~l~~~~~~~Ll~~le~g~~~~~~~~~~~~~~ 519 (693)
+++..........+....+.... ................++++||++.+....+..+...++.... ...
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~ide~~~~~~~~~~~~~~~~~~~~~---------~~~ 155 (253)
T d1sxja2 85 ASDVRSKTLLNAGVKNALDNMSVVGYFKHNEEAQNLNGKHFVIIMDEVDGMSGGDRGGVGQLAQFCRK---------TST 155 (253)
T ss_dssp TTSCCCHHHHHHTGGGGTTBCCSTTTTTC----CCSSTTSEEEEECSGGGCCTTSTTHHHHHHHHHHH---------CSS
T ss_pred CCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHCC---------CCC
T ss_conf 43221168899999887631212101334320145566513777630111110001346777654012---------342
Q ss_pred EEEEEECCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHCCCCEEECCCCCHHHHHHHHHHHHH
Q ss_conf 69999538882566406654455567674311189999889999860176368603594787478999999999999999
Q 005511 520 TLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 599 (693)
Q Consensus 520 ~i~I~tsn~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~r~~~~i~f~~l~~~~~~~i~~~~l~ 599 (693)
.+++++|.... . ....+.+|+ ..+.|.+++.+++..++...+.
T Consensus 156 -~ii~i~~~~~~-------------------~----------------~~~~l~~~~-~~i~f~~~~~~~i~~~l~~i~~ 198 (253)
T d1sxja2 156 -PLILICNERNL-------------------P----------------KMRPFDRVC-LDIQFRRPDANSIKSRLMTIAI 198 (253)
T ss_dssp -CEEEEESCTTS-------------------S----------------TTGGGTTTS-EEEECCCCCHHHHHHHHHHHHH
T ss_pred -CCCCCCCCCCC-------------------C----------------CCCCCCCEE-EEEECCCCCHHHHHHHHHHHHH
T ss_conf -22111355552-------------------1----------------135324403-6531145314678899999999
Q ss_pred HHHHHHHCCCCEEEECHHHHHHHHHHCCCCCCCCCHHHHHHH
Q ss_conf 999998309985983988999999804498899603799999
Q 005511 600 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIM 641 (693)
Q Consensus 600 ~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~g~r~l~~~i~ 641 (693)
.. ++ .+++++++.+++.+ .+++++++.
T Consensus 199 ~e-------~i--~i~~~~l~~i~~~s------~GDiR~ai~ 225 (253)
T d1sxja2 199 RE-------KF--KLDPNVIDRLIQTT------RGDIRQVIN 225 (253)
T ss_dssp HH-------TC--CCCTTHHHHHHHHT------TTCHHHHHH
T ss_pred HH-------CC--CCCHHHHHHHHHHC------CCCHHHHHH
T ss_conf 80-------99--99999999999967------970999999
No 48
>d1g8pa_ c.37.1.20 (A:) ATPase subunit of magnesium chelatase, BchI {Rhodobacter capsulatus [TaxId: 1061]}
Probab=99.61 E-value=7.9e-14 Score=108.73 Aligned_cols=163 Identities=21% Similarity=0.349 Sum_probs=99.1
Q ss_pred CCCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCC--------------CCCCC--CCC----
Q ss_conf 9987668889999999997039999807888999719999999999975599--------------99988--996----
Q 005511 40 KLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGD--------------VPDTI--EGK---- 99 (693)
Q Consensus 40 ~~~~ivG~~~~~~~l~~~l~~~~~~~ilL~GppGtGKT~la~~la~~l~~~~--------------~~~~~--~~~---- 99 (693)
.|.+++||+..++.+.-.+.....+|+||+||||||||++|++++..++.-. ++... ...
T Consensus 5 ~f~~I~Gq~~~kral~laa~~~~~h~vLl~G~pG~GKT~lar~~~~iLp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (333)
T d1g8pa_ 5 PFSAIVGQEDMKLALLLTAVDPGIGGVLVFGDRGTGKSTAVRALAALLPEIEAVEGCPVSSPNVEMIPDWATVLSTNVIR 84 (333)
T ss_dssp CGGGSCSCHHHHHHHHHHHHCGGGCCEEEECCGGGCTTHHHHHHHHHSCCEEEETTCTTCCSSGGGSCTTCCCSCCCEEE
T ss_pred CHHHCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCHHHCCCCCCCC
T ss_conf 85140694999999999976469970899889985299999999873798215405753467534462022012457521
Q ss_pred ---EEEEEECCCCCCCCCCCC--HHHHHHHH-----HHHHHHHCCCEEEEEECCCHHHHCCCCCCHHHHHHHHHHHHCCC
Q ss_conf ---699986521013974466--18999999-----99999708984999916003310899988476999883311079
Q 005511 100 ---KVITLDMGLLVAGTKYRG--EFEERLKK-----LMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARG 169 (693)
Q Consensus 100 ---~~~~~~~~~~~~~~~~~g--~~~~~~~~-----~~~~~~~~~~~iL~iDEid~l~~~~~~~~~~~~~~~L~~~l~~~ 169 (693)
+++....+.-. ....| ........ ..+.+..+..+|+|+||++.+.+ ..++.|+..|+.+
T Consensus 85 ~~~~~~~~~~~~~~--~~l~G~~d~~~~~~~g~~~~~~G~l~~A~~gvl~iDEi~~~~~--------~~~~aLl~~me~~ 154 (333)
T d1g8pa_ 85 KPTPVVDLPLGVSE--DRVVGALDIERAISKGEKAFEPGLLARANRGYLYIDECNLLED--------HIVDLLLDVAQSG 154 (333)
T ss_dssp ECCCEEEECTTCCH--HHHHCEECHHHHHHHCGGGEECCHHHHHTTEEEEETTGGGSCH--------HHHHHHHHHHHHS
T ss_pred CCCCEEECCCCCCC--CCCCCCCHHHHCCCCCCCEEECCCCCCCCCCEEECCCHHHHHH--------HHHHHHHHHHCCC
T ss_conf 23752423677885--4355741021102368602202531135563763153777779--------9999874453077
Q ss_pred C---------------CEEEEEECHHHHHHHHHCCHHHHCCCC-CCCCCCC-CHHHHHHHHHHH
Q ss_conf 8---------------179997435889854203988854678-3115899-999999999999
Q 005511 170 E---------------LQCIGATTLDEYRKHIEKDPALERRFQ-PVKVPEP-SVDETIQILKGL 216 (693)
Q Consensus 170 ~---------------i~iI~~t~~~~~~~~~~l~~~l~~Rf~-~i~~~~p-~~~e~~~il~~~ 216 (693)
. +.+++++|+.+. .+.+++++||. .+.++.| +.+.+..+....
T Consensus 155 ~v~i~r~g~~~~~p~~f~liaa~Np~~~----~l~~~llDRf~~~i~v~~~~~~~~~~~~~~~~ 214 (333)
T d1g8pa_ 155 ENVVERDGLSIRHPARFVLVGSGNPEEG----DLRPQLLDRFGLSVEVLSPRDVETRVEVIRRR 214 (333)
T ss_dssp EEEECCTTCCEEEECCEEEEEEECSCSC----CCCHHHHTTCSEEEECCCCCSHHHHHHHHHHH
T ss_pred EEEECCCCCEECCCCCEEEEEECCCCCC----CCCCCHHHHHCCEEECCCCCHHHHHHHHHHHH
T ss_conf 6875135843048888799984576312----36631032413344326864035788877765
No 49
>d1l8qa2 c.37.1.20 (A:77-289) Chromosomal replication initiation factor DnaA {Aquifex aeolicus [TaxId: 63363]}
Probab=99.60 E-value=3.4e-14 Score=111.21 Aligned_cols=182 Identities=18% Similarity=0.194 Sum_probs=120.4
Q ss_pred CCCCCC-CCC--HHHHHHHHHHHHCC--CCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCC
Q ss_conf 999876-688--89999999997039--9998078889997199999999999755999998899669998652101397
Q 005511 39 GKLDPV-VGR--QPQIERVVQILGRR--TKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGT 113 (693)
Q Consensus 39 ~~~~~i-vG~--~~~~~~l~~~l~~~--~~~~ilL~GppGtGKT~la~~la~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (693)
.+|+++ +|. +.+...+.++...+ ..++++||||+|||||+|++++++++... +..+++++...+....
T Consensus 7 ~tFdnF~vg~~N~~a~~~~~~~~~~~~~~~n~l~l~G~~G~GKTHLl~A~~~~~~~~-------~~~~~~~~~~~~~~~~ 79 (213)
T d1l8qa2 7 YTLENFIVGEGNRLAYEVVKEALENLGSLYNPIFIYGSVGTGKTHLLQAAGNEAKKR-------GYRVIYSSADDFAQAM 79 (213)
T ss_dssp CCSSSCCCCTTTHHHHHHHHHHHHTTTTSCSSEEEECSSSSSHHHHHHHHHHHHHHT-------TCCEEEEEHHHHHHHH
T ss_pred CCHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCC-------CCCEEEECHHHHHHHH
T ss_conf 976531377749999999999986768778857998889983999999999874467-------6504884437879999
Q ss_pred CCCCH-HHHHHHHHHHHHHHCCCEEEEEECCCHHHHCCCCCCHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHCCHHH
Q ss_conf 44661-89999999999970898499991600331089998847699988331107981799974358898542039888
Q 005511 114 KYRGE-FEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPAL 192 (693)
Q Consensus 114 ~~~g~-~~~~~~~~~~~~~~~~~~iL~iDEid~l~~~~~~~~~~~~~~~L~~~l~~~~i~iI~~t~~~~~~~~~~l~~~l 192 (693)
... ...............+ +|+|||+|.+. +.......+...+....+.+..+++.+..++.. .-...+.+
T Consensus 80 --~~~~~~~~~~~~~~~~~~~d--ll~iDDi~~i~--~~~~~~~~lf~lin~~~~~~~~iiits~~~p~~--l~~~~~dL 151 (213)
T d1l8qa2 80 --VEHLKKGTINEFRNMYKSVD--LLLLDDVQFLS--GKERTQIEFFHIFNTLYLLEKQIILASDRHPQK--LDGVSDRL 151 (213)
T ss_dssp --HHHHHHTCHHHHHHHHHTCS--EEEEECGGGGT--TCHHHHHHHHHHHHHHHHTTCEEEEEESSCGGG--CTTSCHHH
T ss_pred --HHHHHCCCHHHHHHHHHHCC--CHHHHHHHHHC--CCHHHHHHHHHHHHHHHHCCCEEEEECCCCCHH--CCCCCHHH
T ss_conf --99987166266789876213--01011265505--865778899999998763166389954875100--13432678
Q ss_pred HCCCC---CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
Q ss_conf 54678---3115899999999999999996722037666858999999864
Q 005511 193 ERRFQ---PVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLS 240 (693)
Q Consensus 193 ~~Rf~---~i~~~~p~~~e~~~il~~~~~~~~~~~~~~~~~~~l~~l~~~~ 240 (693)
.||+. .+.++ |+.+++.++++..+. ..++.+++++++++++.+
T Consensus 152 ~SRL~~g~~~~i~-p~d~~~~~iL~~~a~----~rgl~l~~~v~~yl~~~~ 197 (213)
T d1l8qa2 152 VSRFEGGILVEIE-LDNKTRFKIIKEKLK----EFNLELRKEVIDYLLENT 197 (213)
T ss_dssp HHHHHTSEEEECC-CCHHHHHHHHHHHHH----HTTCCCCHHHHHHHHHHC
T ss_pred HHHHHCCEEEEEC-CCCHHHHHHHHHHHH----HCCCCCCHHHHHHHHHHC
T ss_conf 8886185689978-882799999999999----829999999999999856
No 50
>d1g41a_ c.37.1.20 (A:) HslU {Haemophilus influenzae [TaxId: 727]}
Probab=99.58 E-value=4.2e-13 Score=103.75 Aligned_cols=77 Identities=27% Similarity=0.406 Sum_probs=60.8
Q ss_pred CCCCCHHHHHHHHHHHHC--------------CCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCC
Q ss_conf 766888999999999703--------------999980788899971999999999997559999988996699986521
Q 005511 43 PVVGRQPQIERVVQILGR--------------RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGL 108 (693)
Q Consensus 43 ~ivG~~~~~~~l~~~l~~--------------~~~~~ilL~GppGtGKT~la~~la~~l~~~~~~~~~~~~~~~~~~~~~ 108 (693)
-+|||+++++.+.-++++ -.++|+||.||+|||||.+|+.+|+.+ +.+|+.++++.
T Consensus 15 yVvGQ~~AKk~lsvav~nhyrR~~~~~~~~~ei~ksNILliGPTGvGKTlLAr~LAk~l----------~VPFv~~daT~ 84 (443)
T d1g41a_ 15 HIIGQADAKRAVAIALRNRWRRMQLQEPLRHEVTPKNILMIGPTGVGKTEIARRLAKLA----------NAPFIKVEATK 84 (443)
T ss_dssp TCCSCHHHHHHHHHHHHHHHHHHHSCTTTTTTCCCCCEEEECCTTSSHHHHHHHHHHHT----------TCCEEEEEGGG
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHH----------CCCEEEEECCE
T ss_conf 02280899999999999999886236544444565647998999988999999999873----------89889862551
Q ss_pred CCCCCCCCC-HHHHHHHHHHHHH
Q ss_conf 013974466-1899999999999
Q 005511 109 LVAGTKYRG-EFEERLKKLMEEI 130 (693)
Q Consensus 109 ~~~~~~~~g-~~~~~~~~~~~~~ 130 (693)
+.. ..|.| ..+..++.++..+
T Consensus 85 fTe-aGYvG~DVesii~~L~~~a 106 (443)
T d1g41a_ 85 FTE-VGYVGKEVDSIIRDLTDSA 106 (443)
T ss_dssp GC-----CCCCTHHHHHHHHHHH
T ss_pred EEE-CCEEECCHHHHHHHHHHHH
T ss_conf 141-1111044457899999987
No 51
>d1w5sa2 c.37.1.20 (A:7-293) CDC6-like protein APE0152, N-terminal domain {Aeropyrum pernix [TaxId: 56636]}
Probab=99.57 E-value=6.1e-13 Score=102.63 Aligned_cols=229 Identities=14% Similarity=0.071 Sum_probs=134.7
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCC------CCCCEEEECCCCCCCHH
Q ss_conf 252693899999999999975027899998438999515889279999999999639------97540553354322100
Q 005511 376 KRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFG------SEEAMIRLDMSEFMERH 449 (693)
Q Consensus 376 ~~i~Gq~~~i~~l~~~i~~~~~~~~~~~~~~~~ill~Gp~GtGKt~lA~~la~~l~~------~~~~~~~~~~~~~~~~~ 449 (693)
..+.|.+..++.+...+.........++.+..+++|+||||||||++++.+++.+.. ....+..+++.......
T Consensus 16 ~~~~~Re~e~~~l~~~l~~~~~~~~~~~~~~~~l~l~GppGtGKT~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (287)
T d1w5sa2 16 PELRVRRGEAEALARIYLNRLLSGAGLSDVNMIYGSIGRVGIGKTTLAKFTVKRVSEAAAKEGLTVKQAYVNAFNAPNLY 95 (287)
T ss_dssp SSCSSSCHHHHHHHHHHHHHHHTSSCBCCEEEEEECTTCCSSSHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCCSHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCHH
T ss_conf 98887899999999999999974998888534899678999899999999999987541555678416630333346504
Q ss_pred HHH----HHCCCCCCCCCCCCC---CHHHHHHH-CCCCEEEEECCCCCC------CHHHHHHHHHHHHCCEEECCCCCEE
Q ss_conf 011----002899987676751---22669998-099989998467422------9889999999740564637999833
Q 005511 450 TVS----KLIGSPPGYVGYTEG---GQLTEAVR-RRPYTVVLFDEIEKA------HPDVFNMMLQILEDGRLTDSKGRTV 515 (693)
Q Consensus 450 ~~~----~l~g~~~~~~g~~~~---~~l~~~~~-~~~~~vl~iDEid~l------~~~~~~~Ll~~le~g~~~~~~~~~~ 515 (693)
... ...+....+.+.... ..+..... .....++++||+|.+ .......+..+++.-.- ..
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iide~d~l~~~~~~~~~~~~~l~~l~~~l~~------~~ 169 (287)
T d1w5sa2 96 TILSLIVRQTGYPIQVRGAPALDILKALVDNLYVENHYLLVILDEFQSMLSSPRIAAEDLYTLLRVHEEIPS------RD 169 (287)
T ss_dssp HHHHHHHHHHTCCCCCTTCCHHHHHHHHHHHHHHHTCEEEEEEESTHHHHSCTTSCHHHHHHHHTHHHHSCC------TT
T ss_pred HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCH------HH
T ss_conf 678887653043233345127889999999998546766541257888515665542678988999874320------10
Q ss_pred ECCCEEEEEECCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHCCCCEEECCCCCHHHHHHHHH
Q ss_conf 16976999953888256640665445556767431118999988999986017636860359478747899999999999
Q 005511 516 DFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIAD 595 (693)
Q Consensus 516 ~~~~~i~I~tsn~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~r~~~~i~f~~l~~~~~~~i~~ 595 (693)
...+..+|+.+|.... .+......+.+.+|+...+.|+||+.+++.+|+.
T Consensus 170 ~~~~~~~i~i~~~~~~------------------------------~~~~~~~~~~~~~r~~~~i~f~~y~~~el~~Il~ 219 (287)
T d1w5sa2 170 GVNRIGFLLVASDVRA------------------------------LSYMREKIPQVESQIGFKLHLPAYKSRELYTILE 219 (287)
T ss_dssp SCCBEEEEEEEEETHH------------------------------HHHHHHHCHHHHTTCSEEEECCCCCHHHHHHHHH
T ss_pred CCCCEEEEEECCCHHH------------------------------HHHHHHHCCCHHCCCCEEEECCCCCHHHHHHHHH
T ss_conf 4565147762430899------------------------------9999862520112322065225775999999876
Q ss_pred HHHHHHHHHHHCCCCEEEECHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 99999999983099859839889999998044988996037999999989999
Q 005511 596 IMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSM 648 (693)
Q Consensus 596 ~~l~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~g~r~l~~~i~~~i~~~l 648 (693)
..+... .....+++++++++++.........+.+++++. .+..+.
T Consensus 220 ~r~~~~-------~~~~~~~~~al~~ia~~~~~~~~~~gd~R~ai~-~l~~a~ 264 (287)
T d1w5sa2 220 QRAELG-------LRDTVWEPRHLELISDVYGEDKGGDGSARRAIV-ALKMAC 264 (287)
T ss_dssp HHHHHH-------BCTTSCCHHHHHHHHHHHCGGGTSCCCHHHHHH-HHHHHH
T ss_pred HHHHHH-------HCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHH-HHHHHH
T ss_conf 667775-------246877999999999997230367889999999-999999
No 52
>d1r6bx2 c.37.1.20 (X:169-436) ClpA, an Hsp100 chaperone, AAA+ modules {Escherichia coli [TaxId: 562]}
Probab=99.56 E-value=3.1e-13 Score=104.66 Aligned_cols=205 Identities=19% Similarity=0.279 Sum_probs=139.4
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCC-------CCCCEEEECCCCCCCH
Q ss_conf 252693899999999999975027899998438999515889279999999999639-------9754055335432210
Q 005511 376 KRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFG-------SEEAMIRLDMSEFMER 448 (693)
Q Consensus 376 ~~i~Gq~~~i~~l~~~i~~~~~~~~~~~~~~~~ill~Gp~GtGKt~lA~~la~~l~~-------~~~~~~~~~~~~~~~~ 448 (693)
..++|.+.-++++...+.+. .+.|++|+||||+|||.+++.+|+.+.. .+..++.++++.+..
T Consensus 18 d~~igRd~Ei~~l~~iL~r~---------~k~n~lLVG~~GvGKTalv~~la~ri~~~~vp~~l~~~~i~~l~~~~lia- 87 (268)
T d1r6bx2 18 DPLIGREKELERAIQVLCRR---------RKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLA- 87 (268)
T ss_dssp CCCCSCHHHHHHHHHHHTSS---------SSCEEEEECCTTSSHHHHHHHHHHHHHHTCSCGGGTTCEEEECCCC---C-
T ss_pred CCCCCHHHHHHHHHHHHHCC---------CCCCCEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECHHHC-
T ss_conf 86638099999999999547---------66896798889886779999999999817845000354127864056750-
Q ss_pred HHHHHHCCCCCCCCCCCCC--CHHHHHHHCCCCEEEEECCCCCCC---------HHHHHHHHHHHHCCEEECCCCCEEEC
Q ss_conf 0011002899987676751--226699980999899984674229---------88999999974056463799983316
Q 005511 449 HTVSKLIGSPPGYVGYTEG--GQLTEAVRRRPYTVVLFDEIEKAH---------PDVFNMMLQILEDGRLTDSKGRTVDF 517 (693)
Q Consensus 449 ~~~~~l~g~~~~~~g~~~~--~~l~~~~~~~~~~vl~iDEid~l~---------~~~~~~Ll~~le~g~~~~~~~~~~~~ 517 (693)
...|.|.-+. ..+...+.+.++.|+||||++.+- ..+-+.|.+.+..|.+.
T Consensus 88 ---------g~~~~g~~e~r~~~i~~~~~~~~~iIlfiDeih~l~~~g~~~g~~~d~a~~Lkp~L~rg~i~--------- 149 (268)
T d1r6bx2 88 ---------GTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIR--------- 149 (268)
T ss_dssp ---------CCCCSSCHHHHHHHHHHHHSSSSCEEEEETTTTTTTTSCCSSSCHHHHHHHHSSCSSSCCCE---------
T ss_pred ---------CCCCCHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCE---------
T ss_conf ---------67630058999999999861267846884336988627777886411798764887479875---------
Q ss_pred CCEEEEEECCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHC--CCHHHHHCCCCEEECCCCCHHHHHHHHH
Q ss_conf 97699995388825664066544555676743111899998899998601--7636860359478747899999999999
Q 005511 518 KNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQY--FRPEFLNRLDEMIVFRQLTKLEVKEIAD 595 (693)
Q Consensus 518 ~~~i~I~tsn~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~--~~~~l~~r~~~~i~f~~l~~~~~~~i~~ 595 (693)
+|++|+.. +..+. -+++|.+|| ..|.+.+++.++...|+.
T Consensus 150 ----vIgatT~e---------------------------------ey~~~~e~d~al~rrF-~~I~V~Eps~e~t~~IL~ 191 (268)
T d1r6bx2 150 ----VIGSTTYQ---------------------------------EFSNIFEKDRALARRF-QKIDITEPSIEETVQIIN 191 (268)
T ss_dssp ----EEEEECHH---------------------------------HHHCCCCCTTSSGGGE-EEEECCCCCHHHHHHHHH
T ss_pred ----EEEECCHH---------------------------------HHHHHHHHCHHHHHHH-CCCCCCCCCHHHHHHHHH
T ss_conf ----99957999---------------------------------9999986167888652-100368989999999999
Q ss_pred HHHHHHHHHHHCCCCEEEECHHHHHHHHHHC--CCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999999998309985983988999999804--4988996037999999989999999870
Q 005511 596 IMLKEVFDRLKTKDIELQVTERFRERVVEEG--YNPSYGARPLRRAIMRLLEDSMAEKMLA 654 (693)
Q Consensus 596 ~~l~~~~~~~~~~~~~l~~~~~~~~~l~~~~--~~~~~g~r~l~~~i~~~i~~~l~~~~~~ 654 (693)
.....+.... + +.++++++..+++.+ |-++.. --.++|. .+..+++..-+.
T Consensus 192 ~~~~~~e~~h---~--v~~~~~al~~~v~ls~ryi~~~~--~PdKAId-llDea~a~~~~~ 244 (268)
T d1r6bx2 192 GLKPKYEAHH---D--VRYTAKAVRAAVELAVKYINDRH--LPDKAID-VIDEAGARARLM 244 (268)
T ss_dssp HHHHHHHHHH---T--CCCCHHHHHHHHHHHHHHCTTSC--TTHHHHH-HHHHHHHHHHHS
T ss_pred HHHHHHHCCC---C--EEECHHHHHHHHHHHHHHCCCCC--CCCHHHH-HHHHHHHHHHHH
T ss_conf 8668885268---7--78574789999999985604788--9848999-999999999850
No 53
>d1fnna2 c.37.1.20 (A:1-276) CDC6, N-domain {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}
Probab=99.54 E-value=1.2e-12 Score=100.60 Aligned_cols=201 Identities=14% Similarity=0.178 Sum_probs=129.3
Q ss_pred HCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCC-CCCEEEECCCCCCCHHHHHH
Q ss_conf 52526938999999999999750278999984389995158892799999999996399-75405533543221000110
Q 005511 375 HKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGS-EEAMIRLDMSEFMERHTVSK 453 (693)
Q Consensus 375 ~~~i~Gq~~~i~~l~~~i~~~~~~~~~~~~~~~~ill~Gp~GtGKt~lA~~la~~l~~~-~~~~~~~~~~~~~~~~~~~~ 453 (693)
.+.++|++..++.+..++..+.. .+..+..+++|+||||||||++++.+++.+.+. ...++.+++...........
T Consensus 15 p~~l~~Re~ei~~l~~~l~~~l~---~~~~~~~~lll~GppGtGKT~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 91 (276)
T d1fnna2 15 PKRLPHREQQLQQLDILLGNWLR---NPGHHYPRATLLGRPGTGKTVTLRKLWELYKDKTTARFVYINGFIYRNFTAIIG 91 (276)
T ss_dssp CSCCTTCHHHHHHHHHHHHHHHH---STTSSCCEEEEECCTTSSHHHHHHHHHHHHTTSCCCEEEEEETTTCCSHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHH---CCCCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHH
T ss_conf 88788779999999999999985---789888816888989998999999999997544688578732300112466654
Q ss_pred H----CCCCCCCCCCCCC---CHHHHHH-HCCCCEEEEECCCCCCCHHHHHHHHHHHHCCEEECCCCCEEECCCEEEEEE
Q ss_conf 0----2899987676751---2266999-809998999846742298899999997405646379998331697699995
Q 005511 454 L----IGSPPGYVGYTEG---GQLTEAV-RRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT 525 (693)
Q Consensus 454 l----~g~~~~~~g~~~~---~~l~~~~-~~~~~~vl~iDEid~l~~~~~~~Ll~~le~g~~~~~~~~~~~~~~~i~I~t 525 (693)
. .+....+.+.... ..+.... ......++++|++|.+....++.+...+...... ...+..+|++
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~-------~~~~~~~i~~ 164 (276)
T d1fnna2 92 EIARSLNIPFPRRGLSRDEFLALLVEHLRERDLYMFLVLDDAFNLAPDILSTFIRLGQEADKL-------GAFRIALVIV 164 (276)
T ss_dssp HHHHHTTCCCCSSCCCHHHHHHHHHHHHHHTTCCEEEEEETGGGSCHHHHHHHHHHTTCHHHH-------SSCCEEEEEE
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC-------CCCCEEEEEC
T ss_conf 567764334555325435789999998752065433203688875354310688887404433-------5652488625
Q ss_pred CCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHCCC-CEEECCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 3888256640665445556767431118999988999986017636860359-478747899999999999999999999
Q 005511 526 SNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLD-EMIVFRQLTKLEVKEIADIMLKEVFDR 604 (693)
Q Consensus 526 sn~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~r~~-~~i~f~~l~~~~~~~i~~~~l~~~~~~ 604 (693)
++.... .+.+.+.+.+|+. ..+.|+|++.+++.+|+...+...
T Consensus 165 ~~~~~~---------------------------------~~~~~~~~~~r~~~~~i~~~~~~~~e~~~il~~r~~~~--- 208 (276)
T d1fnna2 165 GHNDAV---------------------------------LNNLDPSTRGIMGKYVIRFSPYTKDQIFDILLDRAKAG--- 208 (276)
T ss_dssp ESSTHH---------------------------------HHTSCHHHHHHHTTCEEECCCCBHHHHHHHHHHHHHHH---
T ss_pred CCCHHH---------------------------------HHHCCHHHHHHHCCHHCCCCCHHHHHHHHHHHHHHHHH---
T ss_conf 876454---------------------------------43113036655110110344123888999999999985---
Q ss_pred HHCCCCEEEECHHHHHHHHHH
Q ss_conf 830998598398899999980
Q 005511 605 LKTKDIELQVTERFRERVVEE 625 (693)
Q Consensus 605 ~~~~~~~l~~~~~~~~~l~~~ 625 (693)
.....+++++++.+++.
T Consensus 209 ----~~~~~~~~~~l~~ia~~ 225 (276)
T d1fnna2 209 ----LAEGSYSEDILQMIADI 225 (276)
T ss_dssp ----BCTTSSCHHHHHHHHHH
T ss_pred ----CCCCCCCHHHHHHHHHH
T ss_conf ----24566637899999997
No 54
>d1w44a_ c.37.1.11 (A:) NTPase P4 {Bacteriophage phi-12 [TaxId: 161736]}
Probab=99.54 E-value=4.1e-15 Score=117.56 Aligned_cols=138 Identities=14% Similarity=0.095 Sum_probs=98.7
Q ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHCCCCCCCCCCCCC--CHHHHHHHCCCCEE
Q ss_conf 9843899951588927999999999963997540553354322100011002899987676751--22669998099989
Q 005511 404 RPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEG--GQLTEAVRRRPYTV 481 (693)
Q Consensus 404 ~~~~~ill~Gp~GtGKt~lA~~la~~l~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~g~~~~--~~l~~~~~~~~~~v 481 (693)
.|.+++||+||||||||.+|+++|..+. ...+|+.++.+++.. .|+|..+. +.++..+++ ++|
T Consensus 121 ~~~g~~l~~G~pG~GKT~la~ala~~~~-~~~~~~~~~~~~~~~------------~~~G~~e~~~~~~f~~a~~--~~i 185 (321)
T d1w44a_ 121 YASGMVIVTGKGNSGKTPLVHALGEALG-GKDKYATVRFGEPLS------------GYNTDFNVFVDDIARAMLQ--HRV 185 (321)
T ss_dssp EESEEEEEECSSSSCHHHHHHHHHHHHH-TTSCCEEEEBSCSST------------TCBCCHHHHHHHHHHHHHH--CSE
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHHC-CCCCEEEEEHHHHHH------------CCCCHHHHHHHHHHHHHHH--CCE
T ss_conf 6886388877998508899999999863-799808978268544------------2444578999999999862--658
Q ss_pred EEECCCCCCCH------------HHHHHHHHHHHCCEEECCCCCEEECCCEEEEEECCCCHHHHHHCCCCCCCCCCCCCC
Q ss_conf 99846742298------------899999997405646379998331697699995388825664066544555676743
Q 005511 482 VLFDEIEKAHP------------DVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEK 549 (693)
Q Consensus 482 l~iDEid~l~~------------~~~~~Ll~~le~g~~~~~~~~~~~~~~~i~I~tsn~~~~~i~~~~~~~~~~~~~~~~ 549 (693)
|||||+|.+.+ .+.+.||..|+... ...++++|++||....
T Consensus 186 lf~DEid~~~~~r~~~~~~~~~~r~v~~lL~e~dg~~---------~~~~v~viaatN~~~~------------------ 238 (321)
T d1w44a_ 186 IVIDSLKNVIGAAGGNTTSGGISRGAFDLLSDIGAMA---------ASRGCVVIASLNPTSN------------------ 238 (321)
T ss_dssp EEEECCTTTC-----------CCHHHHHHHHHHHHHH---------HHHTCEEEEECCCCCC------------------
T ss_pred EEEEHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCC---------CCCCEEEEEECCCCCC------------------
T ss_conf 9741012221234567898741334515665203556---------6788499983797635------------------
Q ss_pred CCHHHHHHHHHHHHHHHCCCHHHH--HCCCCEEECCCCCHHHHHHHHHHHH
Q ss_conf 111899998899998601763686--0359478747899999999999999
Q 005511 550 DSSYNRIKSLVTEELKQYFRPEFL--NRLDEMIVFRQLTKLEVKEIADIML 598 (693)
Q Consensus 550 ~~~~~~l~~~~~~~~~~~~~~~l~--~r~~~~i~f~~l~~~~~~~i~~~~l 598 (693)
.+. +.+++. +||+..+...+++.++..+|+....
T Consensus 239 ~~~---------------i~~~~~r~~Rf~~~v~v~~pd~~~r~~il~~~~ 274 (321)
T d1w44a_ 239 DDK---------------IVELVKEASRSNSTSLVISTDVDGEWQVLTRTG 274 (321)
T ss_dssp CHH---------------HHHHHHHHHHHSCSEEEEECSSTTEEEEEEECB
T ss_pred CCC---------------HHHHHHCCCCCCCEEECCCCCHHHHHHHHHHHC
T ss_conf 310---------------102333657555421158988678999999862
No 55
>d1qvra2 c.37.1.20 (A:149-535) ClpB, AAA+ modules {Thermus thermophilus [TaxId: 274]}
Probab=99.46 E-value=1e-12 Score=101.13 Aligned_cols=181 Identities=20% Similarity=0.297 Sum_probs=126.9
Q ss_pred HCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCC-------CCCEEEECCCCCCC
Q ss_conf 52526938999999999999750278999984389995158892799999999996399-------75405533543221
Q 005511 375 HKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGS-------EEAMIRLDMSEFME 447 (693)
Q Consensus 375 ~~~i~Gq~~~i~~l~~~i~~~~~~~~~~~~~~~~ill~Gp~GtGKt~lA~~la~~l~~~-------~~~~~~~~~~~~~~ 447 (693)
...++|.+.-++++...+.+.. +.|.+|+||||+|||.++..+|..+... +..++.++++.+..
T Consensus 21 ld~~~gr~~ei~~~~~~L~r~~---------k~n~llvG~~GvGKtaiv~~la~~i~~~~vp~~l~~~~i~~ld~~~l~a 91 (387)
T d1qvra2 21 LDPVIGRDEEIRRVIQILLRRT---------KNNPVLIGEPGVGKTAIVEGLAQRIVKGDVPEGLKGKRIVSLQMGSLLA 91 (387)
T ss_dssp SCCCCSCHHHHHHHHHHHHCSS---------CCCCEEEECTTSCHHHHHHHHHHHHHHTCSCTTSTTCEEEEECC-----
T ss_pred CCCCCCCHHHHHHHHHHHHCCC---------CCCCEEECCCCCCHHHHHHHHHHHHHHCCCCHHHCCCEEEEEEHHHHHC
T ss_conf 9987480899999999982488---------9997687999988999999999999808999788696689955766652
Q ss_pred HHHHHHHCCCCCCCCCCCCCC--HHHHHHHCC-CCEEEEECCCCCC--------CHHHHHHHHHHHHCCEEECCCCCEEE
Q ss_conf 000110028999876767512--266999809-9989998467422--------98899999997405646379998331
Q 005511 448 RHTVSKLIGSPPGYVGYTEGG--QLTEAVRRR-PYTVVLFDEIEKA--------HPDVFNMMLQILEDGRLTDSKGRTVD 516 (693)
Q Consensus 448 ~~~~~~l~g~~~~~~g~~~~~--~l~~~~~~~-~~~vl~iDEid~l--------~~~~~~~Ll~~le~g~~~~~~~~~~~ 516 (693)
. .+|.|.-+.+ .+...+... ++.||||||++.+ ..++-+.|.+.+..|.+.
T Consensus 92 g----------~~~~g~~e~r~~~i~~~~~~~~~~~ilfide~h~l~~~g~~~g~~d~a~~Lkp~L~rg~~~-------- 153 (387)
T d1qvra2 92 G----------AKYRGEFEERLKAVIQEVVQSQGEVILFIDELHTVVGAGKAEGAVDAGNMLKPALARGELR-------- 153 (387)
T ss_dssp ----------------CHHHHHHHHHHHHHTTCSSEEEEECCC-------------------HHHHHTTCCC--------
T ss_pred C----------CCCCHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHCCCCCCCCCCHHHHHHHHHHCCCCC--------
T ss_conf 6----------6741368999999999850589966987240888842777877413899999997378851--------
Q ss_pred CCCEEEEEECCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHCCCCEEECCCCCHHHHHHHHHH
Q ss_conf 69769999538882566406654455567674311189999889999860176368603594787478999999999999
Q 005511 517 FKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADI 596 (693)
Q Consensus 517 ~~~~i~I~tsn~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~r~~~~i~f~~l~~~~~~~i~~~ 596 (693)
+|.+|+... | + .+ + =+++|.+|| +.|.+.+++.++...|+..
T Consensus 154 -----~I~~tT~~e----------------------y-------~-~~-e-~d~al~rrF-~~v~v~ep~~~~~~~il~~ 195 (387)
T d1qvra2 154 -----LIGATTLDE----------------------Y-------R-EI-E-KDPALERRF-QPVYVDEPTVEETISILRG 195 (387)
T ss_dssp -----EEEEECHHH----------------------H-------H-HH-T-TCTTTCSCC-CCEEECCCCHHHHHHHHHH
T ss_pred -----EEEECCHHH----------------------H-------H-HH-C-CCHHHHHHC-CCCCCCCCCHHHHHHHHHH
T ss_conf -----666368999----------------------9-------8-76-3-367999824-6112799867889999999
Q ss_pred HHHHHHHHHHCCCCEEEECHHHHHHHHHH
Q ss_conf 99999999830998598398899999980
Q 005511 597 MLKEVFDRLKTKDIELQVTERFRERVVEE 625 (693)
Q Consensus 597 ~l~~~~~~~~~~~~~l~~~~~~~~~l~~~ 625 (693)
....+.... + +.++++++...+..
T Consensus 196 ~~~~~e~~h---~--v~~~~~ai~~~v~l 219 (387)
T d1qvra2 196 LKEKYEVHH---G--VRISDSAIIAAATL 219 (387)
T ss_dssp HHHHHHHHT---T--CEECHHHHHHHHHH
T ss_pred HHHHHHHCC---C--CCCCHHHHHHHHHH
T ss_conf 999987404---7--74669999999985
No 56
>d2gnoa2 c.37.1.20 (A:11-208) gamma subunit of DNA polymerase III, N-domain {Thermotoga maritima [TaxId: 2336]}
Probab=99.41 E-value=3.2e-12 Score=97.63 Aligned_cols=132 Identities=14% Similarity=0.103 Sum_probs=55.2
Q ss_pred HHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 99999999703999980788899971999999999997559999988996699986521013974466189999999999
Q 005511 50 QIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEE 129 (693)
Q Consensus 50 ~~~~l~~~l~~~~~~~ilL~GppGtGKT~la~~la~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 129 (693)
+++.+.+++....++++||+||||+|||++|..++..+..... .+..++++.... .. . ..+.++.+...
T Consensus 2 ~~~~l~~~i~~~~~~~~l~~G~~g~gk~~~a~~l~~~i~~~~~----~h~D~~~i~~~~----~~-I--~Id~IR~i~~~ 70 (198)
T d2gnoa2 2 QLETLKRIIEKSEGISILINGEDLSYPREVSLELPEYVEKFPP----KASDVLEIDPEG----EN-I--GIDDIRTIKDF 70 (198)
T ss_dssp HHHHHHHHHHTCSSEEEEEECSSSSHHHHHHHHHHHHHHTSCC----CTTTEEEECCSS----SC-B--CHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCC----CCCCEEEEECCC----CC-C--CHHHHHHHHHH
T ss_conf 7899999996699855998898998889999999999843456----799889980776----78-9--98999999999
Q ss_pred HHH----CCCEEEEEECCCHHHHCCCCCCHHHHHHHHHHHHCC--CCCEEEEEECHHHHHHHHHCCHHHHCCCCCCCCCC
Q ss_conf 970----898499991600331089998847699988331107--98179997435889854203988854678311589
Q 005511 130 IKQ----SDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLAR--GELQCIGATTLDEYRKHIEKDPALERRFQPVKVPE 203 (693)
Q Consensus 130 ~~~----~~~~iL~iDEid~l~~~~~~~~~~~~~~~L~~~l~~--~~i~iI~~t~~~~~~~~~~l~~~l~~Rf~~i~~~~ 203 (693)
+.. +...|++|||+|.|. .+.+++|++.+|. ....+|++|+.+. .+.|+++|||+.+.|+.
T Consensus 71 ~~~~~~~~~~KviIId~ad~l~--------~~aqNaLLK~LEEPp~~t~fiLit~~~~-----~ll~TI~SRC~~i~~~~ 137 (198)
T d2gnoa2 71 LNYSPELYTRKYVIVHDCERMT--------QQAANAFLKALEEPPEYAVIVLNTRRWH-----YLLPTIKSRVFRVVVNV 137 (198)
T ss_dssp HTSCCSSSSSEEEEETTGGGBC--------HHHHHHTHHHHHSCCTTEEEEEEESCGG-----GSCHHHHTTSEEEECCC
T ss_pred HHHCCCCCCCEEEEEECCCCCC--------HHHHHHHHHHHHCCCCCCEEEECCCCHH-----HCHHHHHCCEEEEECCC
T ss_conf 9617545898799994731036--------6666478887737898852222069956-----68788735227776799
Q ss_pred CC
Q ss_conf 99
Q 005511 204 PS 205 (693)
Q Consensus 204 p~ 205 (693)
|.
T Consensus 138 p~ 139 (198)
T d2gnoa2 138 PK 139 (198)
T ss_dssp CH
T ss_pred CH
T ss_conf 36
No 57
>d2gnoa2 c.37.1.20 (A:11-208) gamma subunit of DNA polymerase III, N-domain {Thermotoga maritima [TaxId: 2336]}
Probab=99.36 E-value=5.9e-12 Score=95.83 Aligned_cols=130 Identities=13% Similarity=0.213 Sum_probs=90.7
Q ss_pred EEEEEECCCCCCHHHHHHHHHHHHCCCC---CCEEEECCCCCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHCC----CC
Q ss_conf 3899951588927999999999963997---5405533543221000110028999876767512266999809----99
Q 005511 407 ASFIFSGPTGVGKSELAKALAAYYFGSE---EAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRR----PY 479 (693)
Q Consensus 407 ~~ill~Gp~GtGKt~lA~~la~~l~~~~---~~~~~~~~~~~~~~~~~~~l~g~~~~~~g~~~~~~l~~~~~~~----~~ 479 (693)
.+++|+||+|+|||++|..+++.+.... ..+..++... .-.+.++.+.+...+... .+
T Consensus 16 ~~~l~~G~~g~gk~~~a~~l~~~i~~~~~~h~D~~~i~~~~---------------~~I~Id~IR~i~~~~~~~~~~~~~ 80 (198)
T d2gnoa2 16 ISILINGEDLSYPREVSLELPEYVEKFPPKASDVLEIDPEG---------------ENIGIDDIRTIKDFLNYSPELYTR 80 (198)
T ss_dssp EEEEEECSSSSHHHHHHHHHHHHHHTSCCCTTTEEEECCSS---------------SCBCHHHHHHHHHHHTSCCSSSSS
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCC---------------CCCCHHHHHHHHHHHHHCCCCCCC
T ss_conf 55998898998889999999999843456799889980776---------------789989999999999617545898
Q ss_pred EEEEECCCCCCCHHHHHHHHHHHHCCEEECCCCCEEECCCEEEEEECCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHH
Q ss_conf 89998467422988999999974056463799983316976999953888256640665445556767431118999988
Q 005511 480 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSL 559 (693)
Q Consensus 480 ~vl~iDEid~l~~~~~~~Ll~~le~g~~~~~~~~~~~~~~~i~I~tsn~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~ 559 (693)
.|++|||+|+++...+|+||+.||+ +..+++||++|+....
T Consensus 81 KviIId~ad~l~~~aqNaLLK~LEE-----------Pp~~t~fiLit~~~~~---------------------------- 121 (198)
T d2gnoa2 81 KYVIVHDCERMTQQAANAFLKALEE-----------PPEYAVIVLNTRRWHY---------------------------- 121 (198)
T ss_dssp EEEEETTGGGBCHHHHHHTHHHHHS-----------CCTTEEEEEEESCGGG----------------------------
T ss_pred EEEEEECCCCCCHHHHHHHHHHHHC-----------CCCCCEEEECCCCHHH----------------------------
T ss_conf 7999947310366666478887737-----------8988522220699566----------------------------
Q ss_pred HHHHHHHCCCHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHH
Q ss_conf 999986017636860359478747899999999999999999
Q 005511 560 VTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEV 601 (693)
Q Consensus 560 ~~~~~~~~~~~~l~~r~~~~i~f~~l~~~~~~~i~~~~l~~~ 601 (693)
+.|.+.+|| ..+.|+++. +...++...+...
T Consensus 122 --------ll~TI~SRC-~~i~~~~p~--~~~~~~~~~~~~~ 152 (198)
T d2gnoa2 122 --------LLPTIKSRV-FRVVVNVPK--EFRDLVKEKIGDL 152 (198)
T ss_dssp --------SCHHHHTTS-EEEECCCCH--HHHHHHHHHHTTH
T ss_pred --------CHHHHHCCE-EEEECCCCH--HHHHHHHHHHHHH
T ss_conf --------878873522-777679936--8899999999999
No 58
>d1l8qa2 c.37.1.20 (A:77-289) Chromosomal replication initiation factor DnaA {Aquifex aeolicus [TaxId: 63363]}
Probab=99.34 E-value=6.2e-11 Score=88.81 Aligned_cols=169 Identities=14% Similarity=0.201 Sum_probs=111.8
Q ss_pred EEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCEEEEECCC
Q ss_conf 89995158892799999999996399754055335432210001100289998767675122669998099989998467
Q 005511 408 SFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEI 487 (693)
Q Consensus 408 ~ill~Gp~GtGKt~lA~~la~~l~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~g~~~~~~l~~~~~~~~~~vl~iDEi 487 (693)
.++++||+|||||.+++++++.+...+...+++++.++.........-+ ....+....+.. .+|+||++
T Consensus 38 ~l~l~G~~G~GKTHLl~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~--dll~iDDi 106 (213)
T d1l8qa2 38 PIFIYGSVGTGKTHLLQAAGNEAKKRGYRVIYSSADDFAQAMVEHLKKG---------TINEFRNMYKSV--DLLLLDDV 106 (213)
T ss_dssp SEEEECSSSSSHHHHHHHHHHHHHHTTCCEEEEEHHHHHHHHHHHHHHT---------CHHHHHHHHHTC--SEEEEECG
T ss_pred CEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHHHCC---------CHHHHHHHHHHC--CCHHHHHH
T ss_conf 5799888998399999999987446765048844378799999998716---------626678987621--30101126
Q ss_pred CCCC--HHHHHHHHHHHHCCEEECCCCCEEECCCEEEEEECCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 4229--88999999974056463799983316976999953888256640665445556767431118999988999986
Q 005511 488 EKAH--PDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELK 565 (693)
Q Consensus 488 d~l~--~~~~~~Ll~~le~g~~~~~~~~~~~~~~~i~I~tsn~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 565 (693)
|.+. +..+..|..++..-. -.+..+|+|++..+..+.
T Consensus 107 ~~i~~~~~~~~~lf~lin~~~----------~~~~~iiits~~~p~~l~------------------------------- 145 (213)
T d1l8qa2 107 QFLSGKERTQIEFFHIFNTLY----------LLEKQIILASDRHPQKLD------------------------------- 145 (213)
T ss_dssp GGGTTCHHHHHHHHHHHHHHH----------HTTCEEEEEESSCGGGCT-------------------------------
T ss_pred HHHCCCHHHHHHHHHHHHHHH----------HCCCEEEEECCCCCHHCC-------------------------------
T ss_conf 550586577889999999876----------316638995487510013-------------------------------
Q ss_pred HCCCHHHHHCCCC--EEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHCCCCCCCCCHHHHHHHHH
Q ss_conf 0176368603594--78747899999999999999999999830998598398899999980449889960379999999
Q 005511 566 QYFRPEFLNRLDE--MIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRL 643 (693)
Q Consensus 566 ~~~~~~l~~r~~~--~i~f~~l~~~~~~~i~~~~l~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~g~r~l~~~i~~~ 643 (693)
.+.+.|.+|+.. ++... ++.+++.+++.+.+.. ++ +.++++++++|++. . . +.|+|..++...
T Consensus 146 -~~~~dL~SRL~~g~~~~i~-p~d~~~~~iL~~~a~~-------rg--l~l~~~v~~yl~~~-~-~--~~R~L~~~l~~l 210 (213)
T d1l8qa2 146 -GVSDRLVSRFEGGILVEIE-LDNKTRFKIIKEKLKE-------FN--LELRKEVIDYLLEN-T-K--NVREIEGKIKLI 210 (213)
T ss_dssp -TSCHHHHHHHHTSEEEECC-CCHHHHHHHHHHHHHH-------TT--CCCCHHHHHHHHHH-C-S--SHHHHHHHHHHH
T ss_pred -CCCHHHHHHHHCCEEEEEC-CCCHHHHHHHHHHHHH-------CC--CCCCHHHHHHHHHH-C-C--CHHHHHHHHHHH
T ss_conf -4326788886185689978-8827999999999998-------29--99999999999985-6-8--699899999986
No 59
>d1ny5a2 c.37.1.20 (A:138-384) Transcriptional activator sigm54 (NtrC1), C-terminal domain {Aquifex aeolicus [TaxId: 63363]}
Probab=99.34 E-value=1.5e-10 Score=86.21 Aligned_cols=172 Identities=17% Similarity=0.254 Sum_probs=106.3
Q ss_pred CCCCCHHHHHHHHHHHHC--CCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCHHH
Q ss_conf 766888999999999703--999980788899971999999999997559999988996699986521013974466189
Q 005511 43 PVVGRQPQIERVVQILGR--RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFE 120 (693)
Q Consensus 43 ~ivG~~~~~~~l~~~l~~--~~~~~ilL~GppGtGKT~la~~la~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 120 (693)
++||+...++.+.+.+.. ....+++++|++||||+++|++++..... ....++.+++..+... ..
T Consensus 1 ~~v~~S~~~~~~~~~~~~~a~~~~pvlI~Ge~GtGK~~~A~~ih~~s~~-------~~~~~~~~~~~~~~~~-----~~- 67 (247)
T d1ny5a2 1 EYVFESPKMKEILEKIKKISCAECPVLITGESGVGKEVVARLIHKLSDR-------SKEPFVALNVASIPRD-----IF- 67 (247)
T ss_dssp CCCCCSHHHHHHHHHHHHHTTCCSCEEEECSTTSSHHHHHHHHHHHSTT-------TTSCEEEEETTTSCHH-----HH-
T ss_pred CEEECCHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHCCC-------CCCCCCCCHHHHHHHC-----CC-
T ss_conf 9586299999999999999688997899899981799999999996587-------6533202102343101-----12-
Q ss_pred HHHHHHHH---------------HHHHCCCEEEEEECCCHHHHCCCCCCHHHHHHHHHHHHCCC-------------CCE
Q ss_conf 99999999---------------99708984999916003310899988476999883311079-------------817
Q 005511 121 ERLKKLME---------------EIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARG-------------ELQ 172 (693)
Q Consensus 121 ~~~~~~~~---------------~~~~~~~~iL~iDEid~l~~~~~~~~~~~~~~~L~~~l~~~-------------~i~ 172 (693)
...+|+ .......+.|||||+|.+. .+.+..|...++.+ .+.
T Consensus 68 --~~~lfg~~~~~~~~~~~~~~g~l~~a~gGtL~l~~i~~L~--------~~~Q~~L~~~l~~~~~~~~~~~~~~~~~~R 137 (247)
T d1ny5a2 68 --EAELFGYEKGAFTGAVSSKEGFFELADGGTLFLDEIGELS--------LEAQAKLLRVIESGKFYRLGGRKEIEVNVR 137 (247)
T ss_dssp --HHHHHCBCTTSSTTCCSCBCCHHHHTTTSEEEEESGGGCC--------HHHHHHHHHHHHHSEECCBTCCSBEECCCE
T ss_pred --HHHHCCCCCCCCCCCCCCCCCHHHCCCCCEEEEECHHHCC--------HHHHHHHHHHHHHCCEEECCCCCCEECCEE
T ss_conf --8876285357767753355888772389979995837599--------999999999997598787899970233759
Q ss_pred EEEEECHHHHH--HHHHCCHHHHCCCCC--CCCCCCCH--HHHHHHHHHHHHHHHHHCC---CCCCHHHHHHHH
Q ss_conf 99974358898--542039888546783--11589999--9999999999996722037---666858999999
Q 005511 173 CIGATTLDEYR--KHIEKDPALERRFQP--VKVPEPSV--DETIQILKGLRERYEIHHK---LRYTDEALVSAA 237 (693)
Q Consensus 173 iI~~t~~~~~~--~~~~l~~~l~~Rf~~--i~~~~p~~--~e~~~il~~~~~~~~~~~~---~~~~~~~l~~l~ 237 (693)
+|++++.+... ..-.+++.|..|+.. +.+|++.. ++...+++.++.++....+ ..++++++..+.
T Consensus 138 lI~~s~~~l~~l~~~~~f~~~L~~~l~~~~i~lPpLreR~~Di~~l~~~~l~~~~~~~~~~~~~ls~~al~~L~ 211 (247)
T d1ny5a2 138 ILAATNRNIKELVKEGKFREDLYYRLGVIEIEIPPLRERKEDIIPLANHFLKKFSRKYAKEVEGFTKSAQELLL 211 (247)
T ss_dssp EEEEESSCHHHHHHTTSSCHHHHHHHTTEEEECCCGGGCHHHHHHHHHHHHHHHHHHTTCCCCEECHHHHHHHH
T ss_pred EEEECCCCHHHHHHCCCCCHHHHHHCCEEEECCCCHHHCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
T ss_conf 99933979999988599748888640810655897011624576640013433466507877888999999998
No 60
>d1jbka_ c.37.1.20 (A:) ClpB, AAA+ modules {Escherichia coli [TaxId: 562]}
Probab=99.31 E-value=5e-12 Score=96.29 Aligned_cols=153 Identities=20% Similarity=0.344 Sum_probs=105.7
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCC-------CCCCEEEECCCCCCCH
Q ss_conf 252693899999999999975027899998438999515889279999999999639-------9754055335432210
Q 005511 376 KRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFG-------SEEAMIRLDMSEFMER 448 (693)
Q Consensus 376 ~~i~Gq~~~i~~l~~~i~~~~~~~~~~~~~~~~ill~Gp~GtGKt~lA~~la~~l~~-------~~~~~~~~~~~~~~~~ 448 (693)
+.++|.+.-++++...+.+.. +.|++|+||||+|||.+++.+|..+.. .+..++.+|++.+...
T Consensus 22 d~~igRd~Ei~~l~~iL~r~~---------k~n~lLvG~pGVGKTalv~~LA~ri~~~~vp~~L~~~~i~~ld~~~LiAg 92 (195)
T d1jbka_ 22 DPVIGRDEEIRRTIQVLQRRT---------KNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAG 92 (195)
T ss_dssp CCCCSCHHHHHHHHHHHTSSS---------SCEEEEECCTTSCHHHHHHHHHHHHHHTCSCGGGTTCEEEEECHHHHHTT
T ss_pred CCCCCCHHHHHHHHHHHHCCC---------CCCEEEEECCCCCCHHHHHHHHHHHHHCCCCHHHCCCEEEEEEHHHHHCC
T ss_conf 987280999999999995358---------88739983587544799999999998089997881856999669998645
Q ss_pred HHHHHHCCCCCCCCCCCCC--CHHHHHHH-CCCCEEEEECCCCCCCH--------HHHHHHHHHHHCCEEECCCCCEEEC
Q ss_conf 0011002899987676751--22669998-09998999846742298--------8999999974056463799983316
Q 005511 449 HTVSKLIGSPPGYVGYTEG--GQLTEAVR-RRPYTVVLFDEIEKAHP--------DVFNMMLQILEDGRLTDSKGRTVDF 517 (693)
Q Consensus 449 ~~~~~l~g~~~~~~g~~~~--~~l~~~~~-~~~~~vl~iDEid~l~~--------~~~~~Ll~~le~g~~~~~~~~~~~~ 517 (693)
..|.|.-+. ..+...+. ...+.||||||++.+-. +.-+.|.+.|+.|.+.
T Consensus 93 ----------~~~rG~~E~rl~~il~e~~~~~~~iILfIDeih~l~~~g~~~g~~d~~~~Lkp~L~rg~l~--------- 153 (195)
T d1jbka_ 93 ----------AKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELH--------- 153 (195)
T ss_dssp ----------TCSHHHHHHHHHHHHHHHHHSTTTEEEEEETGGGGTT------CCCCHHHHHHHHHTTSCC---------
T ss_pred ----------CCCCHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCE---------
T ss_conf ----------8740779999999999873179808997260899843787777523899999998579954---------
Q ss_pred CCEEEEEECCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHC--CCHHHHHCCCCEEECCCCCHHHHHHHH
Q ss_conf 97699995388825664066544555676743111899998899998601--763686035947874789999999999
Q 005511 518 KNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQY--FRPEFLNRLDEMIVFRQLTKLEVKEIA 594 (693)
Q Consensus 518 ~~~i~I~tsn~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~--~~~~l~~r~~~~i~f~~l~~~~~~~i~ 594 (693)
+|.+|+... ..+. -+++|.+|| +.|...+++.++-..|+
T Consensus 154 ----~IgatT~ee---------------------------------y~~~~e~d~aL~rrF-~~I~V~Ep~~e~t~~IL 194 (195)
T d1jbka_ 154 ----CVGATTLDE---------------------------------YRQYIEKDAALERRF-QKVFVAEPSVEDTIAIL 194 (195)
T ss_dssp ----EEEEECHHH---------------------------------HHHHTTTCHHHHTTE-EEEECCCCCHHHHHTTC
T ss_pred ----EEECCCHHH---------------------------------HHHHHHCCHHHHHCC-CEEECCCCCHHHHHHHH
T ss_conf ----985189999---------------------------------999987388999639-87545898989999985
No 61
>d2fnaa2 c.37.1.20 (A:1-283) Archaeal ATPase SSO1545 {Sulfolobus solfataricus [TaxId: 2287]}
Probab=99.15 E-value=2.6e-08 Score=70.68 Aligned_cols=180 Identities=14% Similarity=0.134 Sum_probs=106.1
Q ss_pred CCCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCC----
Q ss_conf 9987668889999999997039999807888999719999999999975599999889966999865210139744----
Q 005511 40 KLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKY---- 115 (693)
Q Consensus 40 ~~~~ivG~~~~~~~l~~~l~~~~~~~ilL~GppGtGKT~la~~la~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 115 (693)
..++++||+++++++.+. ..++++++||+|+|||++++.+++.+ +....++++.........
T Consensus 10 ~~~~f~GR~~el~~l~~~----~~~~i~i~G~~G~GKTsLl~~~~~~~----------~~~~~~i~~~~~~~~~~~~~~~ 75 (283)
T d2fnaa2 10 NRKDFFDREKEIEKLKGL----RAPITLVLGLRRTGKSSIIKIGINEL----------NLPYIYLDLRKFEERNYISYKD 75 (283)
T ss_dssp SGGGSCCCHHHHHHHHHT----CSSEEEEEESTTSSHHHHHHHHHHHH----------TCCEEEEEGGGGTTCSCCCHHH
T ss_pred CHHHCCCHHHHHHHHHHC----CCCEEEEECCCCCCHHHHHHHHHHHC----------CCCEEEEEECCCCCCCCCCHHH
T ss_conf 722078969999999840----59879998699982999999999977----------9986999721453333243999
Q ss_pred ----------------------------------------CCHHHHHHHHHHHHHH--HCCCEEEEEECCCHHHHCCCCC
Q ss_conf ----------------------------------------6618999999999997--0898499991600331089998
Q 005511 116 ----------------------------------------RGEFEERLKKLMEEIK--QSDEIILFIDEVHTLIGAGAAE 153 (693)
Q Consensus 116 ----------------------------------------~g~~~~~~~~~~~~~~--~~~~~iL~iDEid~l~~~~~~~ 153 (693)
.......+..++.... ...+.++++||++.+.......
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~i~id~~~~~~~~~~~~ 155 (283)
T d2fnaa2 76 FLLELQKEINKLVKRLPSLLKALKNIQGIVIMGNEIKFNWNRKDRLSFANLLESFEQASKDNVIIVLDEAQELVKLRGVN 155 (283)
T ss_dssp HHHHHHHHHHHHHHHCTTHHHHTTTSTTEEECSSSEEEC-----CCCHHHHHHHHHHTCSSCEEEEEETGGGGGGCTTCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCHHH
T ss_conf 99999997544555557777777753033434432223410013458999999987631555545664055413332699
Q ss_pred CHHHHHHHHHHHHC-CCCCEEEEEECHHHHH-HHHH---CCHHHHCCC-CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 84769998833110-7981799974358898-5420---398885467-8311589999999999999999672203766
Q 005511 154 GAIDAANILKPSLA-RGELQCIGATTLDEYR-KHIE---KDPALERRF-QPVKVPEPSVDETIQILKGLRERYEIHHKLR 227 (693)
Q Consensus 154 ~~~~~~~~L~~~l~-~~~i~iI~~t~~~~~~-~~~~---l~~~l~~Rf-~~i~~~~p~~~e~~~il~~~~~~~~~~~~~~ 227 (693)
+...+..... ...+..+.++...... .... ....+..|+ ..+.+++.+.++..+++...... .+
T Consensus 156 ----~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~L~~l~~~e~~~~l~~~~~~----~~-- 225 (283)
T d2fnaa2 156 ----LLPALAYAYDNLKRIKFIMSGSEMGLLYDYLRVEDPESPLFGRAFSTVELKPFSREEAIEFLRRGFQE----AD-- 225 (283)
T ss_dssp ----CHHHHHHHHHHCTTEEEEEEESSHHHHHHHTTTTCTTSTTTTCCCEEEEECCCCHHHHHHHHHHHHHH----HT--
T ss_pred ----HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHCCCCEEEEEECCCCHHHHHHHHHHHHHH----CC--
T ss_conf ----99999999875311344203565067899997542100010341058862887889999999966545----69--
Q ss_pred CCHHHHHHHHHHHHHH
Q ss_conf 6858999999864441
Q 005511 228 YTDEALVSAAQLSYQY 243 (693)
Q Consensus 228 ~~~~~l~~l~~~~~~~ 243 (693)
++.+.+..+.+.++|.
T Consensus 226 ~~~~~~~~i~~~~~G~ 241 (283)
T d2fnaa2 226 IDFKDYEVVYEKIGGI 241 (283)
T ss_dssp CCCCCHHHHHHHHCSC
T ss_pred CCHHHHHHHHHHHCCC
T ss_conf 9999999999996997
No 62
>d1svma_ c.37.1.20 (A:) Papillomavirus large T antigen helicase domain {Simian virus 40 [TaxId: 10633]}
Probab=99.13 E-value=5.9e-11 Score=88.95 Aligned_cols=141 Identities=15% Similarity=0.088 Sum_probs=73.6
Q ss_pred HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCC
Q ss_conf 99999998525269389999999999997502789999843899951588927999999999963997540553354322
Q 005511 367 LLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFM 446 (693)
Q Consensus 367 ~~~~~~~l~~~i~Gq~~~i~~l~~~i~~~~~~~~~~~~~~~~ill~Gp~GtGKt~lA~~la~~l~~~~~~~~~~~~~~~~ 446 (693)
...+-..+...+.|++..+... ++....+. | ++ ..++|+||||||||++|+++|+.+ +.+++.+++++..
T Consensus 122 ~~~il~~l~~~~~~~~~~i~~~---l~~~~~~~--~-~~-~~~~~~g~~~~gk~~~~~~~~~~~---~~~~i~in~s~~r 191 (362)
T d1svma_ 122 WMAGVAWLHCLLPKMDSVVYDF---LKCMVYNI--P-KK-RYWLFKGPIDSGKTTLAAALLELC---GGKALNVNLPLDR 191 (362)
T ss_dssp HHHHHHHHTTTSTTHHHHHHHH---HHHHHHCC--T-TC-CEEEEECSTTSSHHHHHHHHHHHH---CCEEECCSSCTTT
T ss_pred HHHHHHHHHHCCCCHHHHHHHH---HHHHHHCC--C-CC-CEEEEECCCCCCHHHHHHHHHHHC---CCCEEEEECCCHH
T ss_conf 9999999986443258999999---99998289--9-76-769998999988899999999985---9978999774201
Q ss_pred CHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHCCE--EECCC-CCEEECCCEEEE
Q ss_conf 100011002899987676751226699980999899984674229889999999740564--63799-983316976999
Q 005511 447 ERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGR--LTDSK-GRTVDFKNTLLI 523 (693)
Q Consensus 447 ~~~~~~~l~g~~~~~~g~~~~~~l~~~~~~~~~~vl~iDEid~l~~~~~~~Ll~~le~g~--~~~~~-~~~~~~~~~i~I 523 (693)
.......+.....+.. ++.... .......++++++||+|.+ ...++++. ..+.. ...+......+|
T Consensus 192 s~~~l~~~~~~~~~l~--d~~~~~-~~~~~~~~~~~~~DeiD~l--------~~~~dg~~~~~~~~~~~~~~~~~~~p~i 260 (362)
T d1svma_ 192 LNFELGVAIDQFLVVF--EDVKGT-GGESRDLPSGQGINNLDNL--------RDYLDGSVKVNLEKKHLNKRTQIFPPGI 260 (362)
T ss_dssp HHHHHGGGTTCSCEEE--TTCCCS-TTTTTTCCCCSHHHHHHTT--------HHHHHCSSCEEECCSSSCCEEECCCCEE
T ss_pred HHHHHHHHHHHHHHHH--HHHHHH-HHHCCCCCCEEEEEHHHHC--------CCCCCCCCHHHHHHHHHCHHHHCCCCCE
T ss_conf 1888875777799899--999876-5410689972887507311--------3456886013444210024553167724
Q ss_pred EECCC
Q ss_conf 95388
Q 005511 524 MTSNV 528 (693)
Q Consensus 524 ~tsn~ 528 (693)
+|||.
T Consensus 261 ~ttN~ 265 (362)
T d1svma_ 261 VTMNE 265 (362)
T ss_dssp EEECS
T ss_pred EECCC
T ss_conf 65065
No 63
>d1svma_ c.37.1.20 (A:) Papillomavirus large T antigen helicase domain {Simian virus 40 [TaxId: 10633]}
Probab=99.08 E-value=1e-09 Score=80.43 Aligned_cols=165 Identities=15% Similarity=0.090 Sum_probs=81.7
Q ss_pred CCCCHHHHHHHHHH-H-HCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCHHHH
Q ss_conf 66888999999999-7-039999807888999719999999999975599999889966999865210139744661899
Q 005511 44 VVGRQPQIERVVQI-L-GRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEE 121 (693)
Q Consensus 44 ivG~~~~~~~l~~~-l-~~~~~~~ilL~GppGtGKT~la~~la~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 121 (693)
+.|.+..+...... + ..+..+++||+||||||||++|+++|+.+ +.+++.++++....
T Consensus 133 ~~~~~~~i~~~l~~~~~~~~~~~~~~~~g~~~~gk~~~~~~~~~~~----------~~~~i~in~s~~rs---------- 192 (362)
T d1svma_ 133 LPKMDSVVYDFLKCMVYNIPKKRYWLFKGPIDSGKTTLAAALLELC----------GGKALNVNLPLDRL---------- 192 (362)
T ss_dssp STTHHHHHHHHHHHHHHCCTTCCEEEEECSTTSSHHHHHHHHHHHH----------CCEEECCSSCTTTH----------
T ss_pred CCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHC----------CCCEEEEECCCHHH----------
T ss_conf 4325899999999998289976769998999988899999999985----------99789997742011----------
Q ss_pred HHHHHHHHHHHCCCEEEEEECCCHHHHCCCCCC---HHHHHHHHHHHHCCC----------------CCEEEEEECHHHH
Q ss_conf 999999999708984999916003310899988---476999883311079----------------8179997435889
Q 005511 122 RLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEG---AIDAANILKPSLARG----------------ELQCIGATTLDEY 182 (693)
Q Consensus 122 ~~~~~~~~~~~~~~~iL~iDEid~l~~~~~~~~---~~~~~~~L~~~l~~~----------------~i~iI~~t~~~~~ 182 (693)
.+.........+.++|+++.......... -.+..+.|...++.+ ...+|+|||...
T Consensus 193 ----~~~l~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~DeiD~l~~~~dg~~~~~~~~~~~~~~~~~~~p~i~ttN~~~- 267 (362)
T d1svma_ 193 ----NFELGVAIDQFLVVFEDVKGTGGESRDLPSGQGINNLDNLRDYLDGSVKVNLEKKHLNKRTQIFPPGIVTMNEYS- 267 (362)
T ss_dssp ----HHHHGGGTTCSCEEETTCCCSTTTTTTCCCCSHHHHHHTTHHHHHCSSCEEECCSSSCCEEECCCCEEEEECSCC-
T ss_pred ----HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHCCCCCCCCCHHHHHHHHHCHHHHCCCCCEEECCCCC-
T ss_conf ----888875777799899999876541068997288750731134568860134442100245531677246506543-
Q ss_pred HHHHHCCHHHHCCCC-CCCCCCCCHHHH-HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHC
Q ss_conf 854203988854678-311589999999-999999999672203766685899999986444100
Q 005511 183 RKHIEKDPALERRFQ-PVKVPEPSVDET-IQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYIS 245 (693)
Q Consensus 183 ~~~~~l~~~l~~Rf~-~i~~~~p~~~e~-~~il~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~ 245 (693)
.......||. .+.+..|+...+ ..++..+..+ ..+..+.+. ++.+..++.+
T Consensus 268 -----~~~~r~~Rf~~~i~~~~~~~~~~~~~~l~~i~~~----~~l~~~~~~---L~~li~~~s~ 320 (362)
T d1svma_ 268 -----VPKTLQARFVKQIDFRPKDYLKHCLERSEFLLEK----RIIQSGIAL---LLMLIWYRPV 320 (362)
T ss_dssp -----CCHHHHTTEEEEEECCCCHHHHHHHHTCTHHHHT----TCTTCHHHH---HHHHHHHSCG
T ss_pred -----CCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCC----CCCCCCHHH---HHHHCCCCCH
T ss_conf -----0012246673688626897478999999998403----578888899---9987368987
No 64
>d1gvnb_ c.37.1.21 (B:) Plasmid maintenance system epsilon/zeta, toxin zeta subunit {Streptococcus pyogenes [TaxId: 1314]}
Probab=98.51 E-value=1.6e-07 Score=65.38 Aligned_cols=37 Identities=27% Similarity=0.414 Sum_probs=19.5
Q ss_pred CCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCC
Q ss_conf 99807888999719999999999975599999889966999865210
Q 005511 63 KNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLL 109 (693)
Q Consensus 63 ~~~ilL~GppGtGKT~la~~la~~l~~~~~~~~~~~~~~~~~~~~~~ 109 (693)
|.++||+||||||||++|+++|..+ +..++.++.+.+
T Consensus 32 P~~ilL~GpPGtGKT~la~~la~~~----------~~~~~~i~~d~~ 68 (273)
T d1gvnb_ 32 PTAFLLGGQPGSGKTSLRSAIFEET----------QGNVIVIDNDTF 68 (273)
T ss_dssp CEEEEEECCTTSCTHHHHHHHHHHT----------TTCCEEECTHHH
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHH----------HCCEEEEECHHH
T ss_conf 9799988979988999999999986----------515489832899
No 65
>d2a5yb3 c.37.1.20 (B:109-385) CED-4, NB-ARC domain {Caenorhabditis elegans [TaxId: 6239]}
Probab=98.51 E-value=7e-06 Score=53.98 Aligned_cols=176 Identities=15% Similarity=0.085 Sum_probs=94.6
Q ss_pred CCCCCCHHHHHHHHHHHHC---CCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCC------
Q ss_conf 8766888999999999703---9999807888999719999999999975599999889966999865210139------
Q 005511 42 DPVVGRQPQIERVVQILGR---RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAG------ 112 (693)
Q Consensus 42 ~~ivG~~~~~~~l~~~l~~---~~~~~ilL~GppGtGKT~la~~la~~l~~~~~~~~~~~~~~~~~~~~~~~~~------ 112 (693)
..++|++..++.+...+.. .....+.++|.+|+|||++|+.+++...... ... -..++++..+.....
T Consensus 20 ~~~~gR~~~~~~i~~~L~~~~~~~~~~v~I~GmgGiGKTtLA~~v~~~~~~~~-~~~--f~~~~Wv~vs~~~~~~~l~~~ 96 (277)
T d2a5yb3 20 MTCYIREYHVDRVIKKLDEMCDLDSFFLFLHGRAGSGKSVIASQALSKSDQLI-GIN--YDSIVWLKDSGTAPKSTFDLF 96 (277)
T ss_dssp CCSCCCHHHHHHHHHHHHHHTTSSSEEEEEECSTTSSHHHHHHHHHHHCSSTB-TTT--BSEEEEEECCCCSTTHHHHHH
T ss_pred CCEECCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHH-HHC--CCEEEEEEECCCCCHHHHHHH
T ss_conf 86237399999999998734687840899977997888999999998556554-012--764899993687777789999
Q ss_pred ---------------C-CCCCHHHHH-HHHHHHHHHHCCCEEEEEECCCHHHHCCCCCCHHHHHHHHHHHHCCCCCEEEE
Q ss_conf ---------------7-446618999-99999999708984999916003310899988476999883311079817999
Q 005511 113 ---------------T-KYRGEFEER-LKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIG 175 (693)
Q Consensus 113 ---------------~-~~~g~~~~~-~~~~~~~~~~~~~~iL~iDEid~l~~~~~~~~~~~~~~~L~~~l~~~~i~iI~ 175 (693)
. ......... ............++++++|+++... ....+ ...+ ..+|.
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~kr~LlVLDDv~~~~----------~~~~~---~~~~-srilv 162 (277)
T d2a5yb3 97 TDILLMLKSEDDLLNFPSVEHVTSVVLKRMICNALIDRPNTLFVFDDVVQEE----------TIRWA---QELR-LRCLV 162 (277)
T ss_dssp HHHHHHHTTTSCCTTCCCCTTCCHHHHHHHHHHHHTTSTTEEEEEEEECCHH----------HHHHH---HHTT-CEEEE
T ss_pred HHHHHHHHCCHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHH----------HHHHH---CCCC-CEEEE
T ss_conf 9999987220220278632123369999999999844688167525066776----------65552---0457-55999
Q ss_pred EECHHHHHHHHHCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
Q ss_conf 74358898542039888546783115899999999999999996722037666858999999864441
Q 005511 176 ATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQY 243 (693)
Q Consensus 176 ~t~~~~~~~~~~l~~~l~~Rf~~i~~~~p~~~e~~~il~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~ 243 (693)
||.... +-..+......+.++.++.++-.+++...... .......++....++..++|.
T Consensus 163 TTR~~~------v~~~~~~~~~~~~l~~L~~~ea~~Lf~~~~~~---~~~~~~~~~~~~~iv~~c~Gl 221 (277)
T d2a5yb3 163 TTRDVE------ISNAASQTCEFIEVTSLEIDECYDFLEAYGMP---MPVGEKEEDVLNKTIELSSGN 221 (277)
T ss_dssp EESBGG------GGGGCCSCEEEEECCCCCHHHHHHHHHHTSCC---CC--CHHHHHHHHHHHHHTTC
T ss_pred EEEHHH------HHHHCCCCCCEEECCCCCHHHHHHHHHHHHCC---CCCCHHHHHHHHHHHHHHCCC
T ss_conf 964489------99863788716877889979999999998477---667425679999999995899
No 66
>d2fnaa2 c.37.1.20 (A:1-283) Archaeal ATPase SSO1545 {Sulfolobus solfataricus [TaxId: 2287]}
Probab=98.48 E-value=3.4e-06 Score=56.12 Aligned_cols=170 Identities=15% Similarity=0.199 Sum_probs=90.4
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHH--HHH
Q ss_conf 252693899999999999975027899998438999515889279999999999639975405533543221000--110
Q 005511 376 KRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHT--VSK 453 (693)
Q Consensus 376 ~~i~Gq~~~i~~l~~~i~~~~~~~~~~~~~~~~ill~Gp~GtGKt~lA~~la~~l~~~~~~~~~~~~~~~~~~~~--~~~ 453 (693)
++++|.+..++.+... . ..+++++||+|+|||++++.+++.+ +..+..+++..+..... ...
T Consensus 12 ~~f~GR~~el~~l~~~----~---------~~~i~i~G~~G~GKTsLl~~~~~~~---~~~~~~i~~~~~~~~~~~~~~~ 75 (283)
T d2fnaa2 12 KDFFDREKEIEKLKGL----R---------APITLVLGLRRTGKSSIIKIGINEL---NLPYIYLDLRKFEERNYISYKD 75 (283)
T ss_dssp GGSCCCHHHHHHHHHT----C---------SSEEEEEESTTSSHHHHHHHHHHHH---TCCEEEEEGGGGTTCSCCCHHH
T ss_pred HHCCCHHHHHHHHHHC----C---------CCEEEEECCCCCCHHHHHHHHHHHC---CCCEEEEEECCCCCCCCCCHHH
T ss_conf 2078969999999840----5---------9879998699982999999999977---9986999721453333243999
Q ss_pred H---------------------CCCCCC----CC------CCCCCC---HHHHHHH-C-CCCEEEEECCCCCCCH----H
Q ss_conf 0---------------------289998----76------767512---2669998-0-9998999846742298----8
Q 005511 454 L---------------------IGSPPG----YV------GYTEGG---QLTEAVR-R-RPYTVVLFDEIEKAHP----D 493 (693)
Q Consensus 454 l---------------------~g~~~~----~~------g~~~~~---~l~~~~~-~-~~~~vl~iDEid~l~~----~ 493 (693)
+ +..... .. ...... .+...+. . ..+.++++||++.+.. .
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~i~id~~~~~~~~~~~~ 155 (283)
T d2fnaa2 76 FLLELQKEINKLVKRLPSLLKALKNIQGIVIMGNEIKFNWNRKDRLSFANLLESFEQASKDNVIIVLDEAQELVKLRGVN 155 (283)
T ss_dssp HHHHHHHHHHHHHHHCTTHHHHTTTSTTEEECSSSEEEC-----CCCHHHHHHHHHHTCSSCEEEEEETGGGGGGCTTCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCHHH
T ss_conf 99999997544555557777777753033434432223410013458999999987631555545664055413332699
Q ss_pred HHHHHHHHHHCCEEECCCCCEEECCCEEEEEECCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHH
Q ss_conf 99999997405646379998331697699995388825664066544555676743111899998899998601763686
Q 005511 494 VFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFL 573 (693)
Q Consensus 494 ~~~~Ll~~le~g~~~~~~~~~~~~~~~i~I~tsn~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~ 573 (693)
....+...++. ..++.+++++..... +..... .......+.
T Consensus 156 ~~~~l~~~~~~------------~~~~~~i~~~~~~~~-~~~~~~--------------------------~~~~~~~~~ 196 (283)
T d2fnaa2 156 LLPALAYAYDN------------LKRIKFIMSGSEMGL-LYDYLR--------------------------VEDPESPLF 196 (283)
T ss_dssp CHHHHHHHHHH------------CTTEEEEEEESSHHH-HHHHTT--------------------------TTCTTSTTT
T ss_pred HHHHHHHHHHH------------HHHHHHHHCCCCCHH-HHHHHH--------------------------HHHHCCHHC
T ss_conf 99999999875------------311344203565067-899997--------------------------542100010
Q ss_pred HCCCCEEECCCCCHHHHHHHHHHHHHH
Q ss_conf 035947874789999999999999999
Q 005511 574 NRLDEMIVFRQLTKLEVKEIADIMLKE 600 (693)
Q Consensus 574 ~r~~~~i~f~~l~~~~~~~i~~~~l~~ 600 (693)
+|....+.+.|++.++..+++...+..
T Consensus 197 ~~~~~~i~L~~l~~~e~~~~l~~~~~~ 223 (283)
T d2fnaa2 197 GRAFSTVELKPFSREEAIEFLRRGFQE 223 (283)
T ss_dssp TCCCEEEEECCCCHHHHHHHHHHHHHH
T ss_pred CCCEEEEEECCCCHHHHHHHHHHHHHH
T ss_conf 341058862887889999999966545
No 67
>d1gvnb_ c.37.1.21 (B:) Plasmid maintenance system epsilon/zeta, toxin zeta subunit {Streptococcus pyogenes [TaxId: 1314]}
Probab=98.26 E-value=2.2e-07 Score=64.34 Aligned_cols=58 Identities=24% Similarity=0.417 Sum_probs=43.6
Q ss_pred HHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCC
Q ss_conf 99999999975027899998438999515889279999999999639975405533543221
Q 005511 386 KAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFME 447 (693)
Q Consensus 386 ~~l~~~i~~~~~~~~~~~~~~~~ill~Gp~GtGKt~lA~~la~~l~~~~~~~~~~~~~~~~~ 447 (693)
+.+...++....+......|.+ +||+||||||||++|+.+|..+ +.+|+.++++++..
T Consensus 13 ~~~~~~~~~~~~~~~~~~~P~~-ilL~GpPGtGKT~la~~la~~~---~~~~~~i~~d~~~~ 70 (273)
T d1gvnb_ 13 NRLNDNLEELIQGKKAVESPTA-FLLGGQPGSGKTSLRSAIFEET---QGNVIVIDNDTFKQ 70 (273)
T ss_dssp HHHHHHHHHHHTTCCCCSSCEE-EEEECCTTSCTHHHHHHHHHHT---TTCCEEECTHHHHT
T ss_pred HHHHHHHHHHHHCCCCCCCCEE-EEEECCCCCCHHHHHHHHHHHH---HCCEEEEECHHHHH
T ss_conf 9999999999841527899979-9988979988999999999986---51548983289999
No 68
>d1ye8a1 c.37.1.11 (A:1-178) Hypothetical kinase-like protein Aq_1292 {Aquifex aeolicus [TaxId: 63363]}
Probab=98.15 E-value=3.4e-06 Score=56.16 Aligned_cols=50 Identities=10% Similarity=0.243 Sum_probs=26.5
Q ss_pred HHHHHHHHCCCEEEEEECCCHHHHCCCCCCHHHHHHHHHHHHCCCCCEEEEEECH
Q ss_conf 9999997089849999160033108999884769998833110798179997435
Q 005511 125 KLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 179 (693)
Q Consensus 125 ~~~~~~~~~~~~iL~iDEid~l~~~~~~~~~~~~~~~L~~~l~~~~i~iI~~t~~ 179 (693)
..+..+....+.+|++||++..... .......+...+......+++++..
T Consensus 90 ~~l~~~~~~~~~vlllDE~~~~~~~-----~~~~~~~l~~~l~~~~~~il~~~h~ 139 (178)
T d1ye8a1 90 RAYREAKKDRRKVIIIDEIGKMELF-----SKKFRDLVRQIMHDPNVNVVATIPI 139 (178)
T ss_dssp HHHHHHHHCTTCEEEECCCSTTGGG-----CHHHHHHHHHHHTCTTSEEEEECCS
T ss_pred HHHHHHHHCCCCCEEECCCCCCCHH-----HHHHHHHHHHHHCCCCCEEEEEECC
T ss_conf 9999997409974230277731004-----5799999998750579789999744
No 69
>d2a5yb3 c.37.1.20 (B:109-385) CED-4, NB-ARC domain {Caenorhabditis elegans [TaxId: 6239]}
Probab=97.94 E-value=0.00047 Score=41.39 Aligned_cols=49 Identities=14% Similarity=0.137 Sum_probs=37.4
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 2526938999999999999750278999984389995158892799999999996
Q 005511 376 KRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYY 430 (693)
Q Consensus 376 ~~i~Gq~~~i~~l~~~i~~~~~~~~~~~~~~~~ill~Gp~GtGKt~lA~~la~~l 430 (693)
..++|.+..++.+...+.... ......+.++|+.|+|||++|+.+.+..
T Consensus 20 ~~~~gR~~~~~~i~~~L~~~~------~~~~~~v~I~GmgGiGKTtLA~~v~~~~ 68 (277)
T d2a5yb3 20 MTCYIREYHVDRVIKKLDEMC------DLDSFFLFLHGRAGSGKSVIASQALSKS 68 (277)
T ss_dssp CCSCCCHHHHHHHHHHHHHHT------TSSSEEEEEECSTTSSHHHHHHHHHHHC
T ss_pred CCEECCHHHHHHHHHHHHHCC------CCCCEEEEEECCCCCCHHHHHHHHHHHH
T ss_conf 862373999999999987346------8784089997799788899999999855
No 70
>d1tf7a2 c.37.1.11 (A:256-497) Circadian clock protein KaiC {Synechococcus sp. strain PCC 7942 (Anacystis nidulans R2) [TaxId: 1140]}
Probab=97.89 E-value=8.6e-05 Score=46.50 Aligned_cols=39 Identities=15% Similarity=0.245 Sum_probs=26.0
Q ss_pred CCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEC
Q ss_conf 9999807888999719999999999975599999889966999865
Q 005511 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDM 106 (693)
Q Consensus 61 ~~~~~ilL~GppGtGKT~la~~la~~l~~~~~~~~~~~~~~~~~~~ 106 (693)
++..-++++||||+|||+++..++...... +..++++..
T Consensus 24 ~~gsl~li~G~pGsGKT~l~~qia~~~~~~-------~~~~~~is~ 62 (242)
T d1tf7a2 24 FKDSIILATGATGTGKTLLVSRFVENACAN-------KERAILFAY 62 (242)
T ss_dssp ESSCEEEEEECTTSSHHHHHHHHHHHHHTT-------TCCEEEEES
T ss_pred CCCEEEEEEECCCCCHHHHHHHHHHHHHHH-------CCCCCEEEC
T ss_conf 698499999189999999999999999872-------324411212
No 71
>d1tuea_ c.37.1.20 (A:) Replication protein E1 helicase domain {Human papillomavirus type 18 [TaxId: 333761]}
Probab=97.68 E-value=3e-05 Score=49.67 Aligned_cols=116 Identities=19% Similarity=0.354 Sum_probs=66.3
Q ss_pred EEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCEEEEECC
Q ss_conf 38999515889279999999999639975405533543221000110028999876767512266999809998999846
Q 005511 407 ASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDE 486 (693)
Q Consensus 407 ~~ill~Gp~GtGKt~lA~~la~~l~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~g~~~~~~l~~~~~~~~~~vl~iDE 486 (693)
..++|+|||+||||++|.+|.+.+.+. .+. +.+.. +.+ .........++++||
T Consensus 54 n~i~~~GP~~TGKS~f~~sl~~~l~G~---vis-----~~N~~--s~F-----------------~Lq~l~~~kv~l~dD 106 (205)
T d1tuea_ 54 NCLVFCGPANTGKSYFGMSFIHFIQGA---VIS-----FVNST--SHF-----------------WLEPLTDTKVAMLDD 106 (205)
T ss_dssp SEEEEESCGGGCHHHHHHHHHHHHTCE---ECC-----CCCSS--SCG-----------------GGGGGTTCSSEEEEE
T ss_pred EEEEEECCCCCCHHHHHHHHHHHHCCE---EEE-----CCCCC--CCC-----------------CCCCCCCCEEEEEEC
T ss_conf 189998899856899999999982887---883-----36788--875-----------------366534786999960
Q ss_pred CCCCCHHHHHH-HHHHHHCCEEEC-CC-CCEEECCCEEEEEECCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 74229889999-999740564637-99-9833169769999538882566406654455567674311189999889999
Q 005511 487 IEKAHPDVFNM-MLQILEDGRLTD-SK-GRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEE 563 (693)
Q Consensus 487 id~l~~~~~~~-Ll~~le~g~~~~-~~-~~~~~~~~~i~I~tsn~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 563 (693)
+........+. +..++++..+.- .. ...+.....-+|+|||.... .++
T Consensus 107 ~t~~~~~~~d~~lK~ll~G~~vsvd~KhK~~vqi~~pPliITsN~~~~----------------~~d------------- 157 (205)
T d1tuea_ 107 ATTTCWTYFDTYMRNALDGNPISIDRKHKPLIQLKCPPILLTTNIHPA----------------KDN------------- 157 (205)
T ss_dssp ECHHHHHHHHHHCHHHHHTCCEEEC----CCEEECCCCEEEEESSCTT----------------SSS-------------
T ss_pred CCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCEEEECCCCCC----------------CCC-------------
T ss_conf 553167789999986228972565213588611258988997288988----------------565-------------
Q ss_pred HHHCCCHHHHHCCCCEEECC
Q ss_conf 86017636860359478747
Q 005511 564 LKQYFRPEFLNRLDEMIVFR 583 (693)
Q Consensus 564 ~~~~~~~~l~~r~~~~i~f~ 583 (693)
-...|.+|+ .+++|+
T Consensus 158 ----~~~~L~sRi-~~f~F~ 172 (205)
T d1tuea_ 158 ----RWPYLESRI-TVFEFP 172 (205)
T ss_dssp ----SCHHHHTSC-EEEECC
T ss_pred ----CCHHHHHEE-EEEECC
T ss_conf ----515466517-998879
No 72
>d1ye8a1 c.37.1.11 (A:1-178) Hypothetical kinase-like protein Aq_1292 {Aquifex aeolicus [TaxId: 63363]}
Probab=97.55 E-value=0.0002 Score=43.90 Aligned_cols=98 Identities=17% Similarity=0.202 Sum_probs=49.1
Q ss_pred EEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCC----------CCHHHH-HHHCCCCCCCC------CCCC----
Q ss_conf 89995158892799999999996399754055335432----------210001-10028999876------7675----
Q 005511 408 SFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEF----------MERHTV-SKLIGSPPGYV------GYTE---- 466 (693)
Q Consensus 408 ~ill~Gp~GtGKt~lA~~la~~l~~~~~~~~~~~~~~~----------~~~~~~-~~l~g~~~~~~------g~~~---- 466 (693)
.+++.||+|+|||++++.++..+-.....+........ ...... ..+........ +...
T Consensus 2 ki~I~G~~G~GKSTLl~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (178)
T d1ye8a1 2 KIIITGEPGVGKTTLVKKIVERLGKRAIGFWTEEVRDPETKKRTGFRIITTEGKKKIFSSKFFTSKKLVGSYGVNVQYFE 81 (178)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHGGGEEEEEEEEEC------CCEEEEEETTCCEEEEEETTCCCSSEETTEEECHHHHH
T ss_pred EEEEECCCCCHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
T ss_conf 89999899938999999998148888646998771328888765311233667778875411345544302303762566
Q ss_pred ------CCHHHHHHHCCCCEEEEECCCCCC---CHHHHHHHHHHHHCC
Q ss_conf ------122669998099989998467422---988999999974056
Q 005511 467 ------GGQLTEAVRRRPYTVVLFDEIEKA---HPDVFNMMLQILEDG 505 (693)
Q Consensus 467 ------~~~l~~~~~~~~~~vl~iDEid~l---~~~~~~~Ll~~le~g 505 (693)
.......+....+.++++||+... .......+...+.+.
T Consensus 82 ~~~~~~~~~~l~~~~~~~~~vlllDE~~~~~~~~~~~~~~l~~~l~~~ 129 (178)
T d1ye8a1 82 ELAIPILERAYREAKKDRRKVIIIDEIGKMELFSKKFRDLVRQIMHDP 129 (178)
T ss_dssp HHHHHHHHHHHHHHHHCTTCEEEECCCSTTGGGCHHHHHHHHHHHTCT
T ss_pred HHHHHHHHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHHHHHHCCC
T ss_conf 532013789999997409974230277731004579999999875057
No 73
>d1kaga_ c.37.1.2 (A:) Shikimate kinase (AroK) {Escherichia coli [TaxId: 562]}
Probab=97.46 E-value=7.1e-05 Score=47.07 Aligned_cols=25 Identities=44% Similarity=0.675 Sum_probs=18.9
Q ss_pred CCCEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 9980788899971999999999997
Q 005511 63 KNNPCLIGEPGVGKTAIAEGLAQRI 87 (693)
Q Consensus 63 ~~~ilL~GppGtGKT~la~~la~~l 87 (693)
.++++|.||||+||||+++.+|+.+
T Consensus 2 ~k~I~l~G~~GsGKSTvak~La~~L 26 (169)
T d1kaga_ 2 KRNIFLVGPMGAGKSTIGRQLAQQL 26 (169)
T ss_dssp CCCEEEECCTTSCHHHHHHHHHHHT
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHH
T ss_conf 9749998999999999999999996
No 74
>d1rkba_ c.37.1.1 (A:) Adenylate kinase {Human (Homo sapiens), isoenzyme 6 [TaxId: 9606]}
Probab=97.43 E-value=8.2e-05 Score=46.63 Aligned_cols=22 Identities=41% Similarity=0.705 Sum_probs=12.4
Q ss_pred EEEECCCCCCHHHHHHHHHHHH
Q ss_conf 9995158892799999999996
Q 005511 409 FIFSGPTGVGKSELAKALAAYY 430 (693)
Q Consensus 409 ill~Gp~GtGKt~lA~~la~~l 430 (693)
+++.||||+|||++|+.||+.+
T Consensus 7 I~i~G~pGsGKTTia~~La~~l 28 (173)
T d1rkba_ 7 ILLTGTPGVGKTTLGKELASKS 28 (173)
T ss_dssp EEEECSTTSSHHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHH
T ss_conf 9898999999899999999997
No 75
>d1tuea_ c.37.1.20 (A:) Replication protein E1 helicase domain {Human papillomavirus type 18 [TaxId: 333761]}
Probab=97.42 E-value=0.00031 Score=42.61 Aligned_cols=117 Identities=18% Similarity=0.245 Sum_probs=65.5
Q ss_pred HHHHHHHHHC-CCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 9999999703-999980788899971999999999997559999988996699986521013974466189999999999
Q 005511 51 IERVVQILGR-RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEE 129 (693)
Q Consensus 51 ~~~l~~~l~~-~~~~~ilL~GppGtGKT~la~~la~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 129 (693)
+..+..++.. ++.+.++|+|||+||||+++.++++.+. + .++... ..... -.+..
T Consensus 40 l~~l~~~l~~~PKkn~i~~~GP~~TGKS~f~~sl~~~l~---------G-~vis~~----N~~s~----------F~Lq~ 95 (205)
T d1tuea_ 40 LGALKSFLKGTPKKNCLVFCGPANTGKSYFGMSFIHFIQ---------G-AVISFV----NSTSH----------FWLEP 95 (205)
T ss_dssp HHHHHHHHHTCTTCSEEEEESCGGGCHHHHHHHHHHHHT---------C-EECCCC----CSSSC----------GGGGG
T ss_pred HHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHC---------C-EEEECC----CCCCC----------CCCCC
T ss_conf 999999973898731899988998568999999999828---------8-788336----78887----------53665
Q ss_pred HHHCCCEEEEEECCCHHHHCCCCCCHHHHHHH-HHHHHCCCC---------------CEEEEEECHHHHHHHHHCCHHHH
Q ss_conf 97089849999160033108999884769998-833110798---------------17999743588985420398885
Q 005511 130 IKQSDEIILFIDEVHTLIGAGAAEGAIDAANI-LKPSLARGE---------------LQCIGATTLDEYRKHIEKDPALE 193 (693)
Q Consensus 130 ~~~~~~~iL~iDEid~l~~~~~~~~~~~~~~~-L~~~l~~~~---------------i~iI~~t~~~~~~~~~~l~~~l~ 193 (693)
+ .+..++++||+...+.. ..+. ++.+++... ..+|.++|.... .-.-.+.|.
T Consensus 96 l--~~~kv~l~dD~t~~~~~--------~~d~~lK~ll~G~~vsvd~KhK~~vqi~~pPliITsN~~~~--~~d~~~~L~ 163 (205)
T d1tuea_ 96 L--TDTKVAMLDDATTTCWT--------YFDTYMRNALDGNPISIDRKHKPLIQLKCPPILLTTNIHPA--KDNRWPYLE 163 (205)
T ss_dssp G--TTCSSEEEEEECHHHHH--------HHHHHCHHHHHTCCEEEC----CCEEECCCCEEEEESSCTT--SSSSCHHHH
T ss_pred C--CCCEEEEEECCCCCHHH--------HHHHHHHHCCCCCEEEEECCCCCCCCCCCCCEEEECCCCCC--CCCCCHHHH
T ss_conf 3--47869999605531677--------89999986228972565213588611258988997288988--565515466
Q ss_pred CCCCCCCCCC
Q ss_conf 4678311589
Q 005511 194 RRFQPVKVPE 203 (693)
Q Consensus 194 ~Rf~~i~~~~ 203 (693)
+|...+.|+.
T Consensus 164 sRi~~f~F~~ 173 (205)
T d1tuea_ 164 SRITVFEFPN 173 (205)
T ss_dssp TSCEEEECCS
T ss_pred HEEEEEECCC
T ss_conf 5179988799
No 76
>d1p9ra_ c.37.1.11 (A:) Extracellular secretion NTPase EpsE {Vibrio cholerae [TaxId: 666]}
Probab=97.39 E-value=0.00078 Score=39.89 Aligned_cols=97 Identities=25% Similarity=0.267 Sum_probs=53.3
Q ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEC-CCCCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCEEE
Q ss_conf 98438999515889279999999999639975405533-54322100011002899987676751226699980999899
Q 005511 404 RPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLD-MSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVV 482 (693)
Q Consensus 404 ~~~~~ill~Gp~GtGKt~lA~~la~~l~~~~~~~~~~~-~~~~~~~~~~~~l~g~~~~~~g~~~~~~l~~~~~~~~~~vl 482 (693)
.|.+.+|+.||+|+|||+....+-..+.....+++.+. ..++.-......-+ .+-.+.+....+..+++.. +.|+
T Consensus 156 ~~~GliLvtGpTGSGKSTTl~~~l~~~~~~~~~i~tiEdPiE~~~~~~~q~~v---~~~~~~~~~~~l~~~lR~d-PDvi 231 (401)
T d1p9ra_ 156 RPHGIILVTGPTGSGKSTTLYAGLQELNSSERNILTVEDPIEFDIDGIGQTQV---NPRVDMTFARGLRAILRQD-PDVV 231 (401)
T ss_dssp SSSEEEEEECSTTSCHHHHHHHHHHHHCCTTSCEEEEESSCCSCCSSSEEEEC---BGGGTBCHHHHHHHHGGGC-CSEE
T ss_pred HHHCEEEEECCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCEEEE---CCCCCCCHHHHHHHHHHHC-CCEE
T ss_conf 41054898767877744779998666257874699962674345678870265---5876779999999998413-8889
Q ss_pred EECCCCCCCHHHHHHHHHHHHCCE
Q ss_conf 984674229889999999740564
Q 005511 483 LFDEIEKAHPDVFNMMLQILEDGR 506 (693)
Q Consensus 483 ~iDEid~l~~~~~~~Ll~~le~g~ 506 (693)
++.|+--. ......+..-..|.
T Consensus 232 ~igEiRd~--~ta~~a~~aa~tGh 253 (401)
T d1p9ra_ 232 MVGEIRDL--ETAQIAVQASLTGH 253 (401)
T ss_dssp EESCCCSH--HHHHHHHHHHHTTC
T ss_pred EECCCCCH--HHHHHHHHHHHCCC
T ss_conf 84576875--99999999972498
No 77
>d1w36d1 c.37.1.19 (D:2-360) Exodeoxyribonuclease V alpha chain (RecD) {Escherichia coli [TaxId: 562]}
Probab=97.34 E-value=0.0019 Score=37.20 Aligned_cols=28 Identities=18% Similarity=0.285 Sum_probs=22.7
Q ss_pred CCEEEEECCCCCCCHHHHHHHHHHHHCC
Q ss_conf 9989998467422988999999974056
Q 005511 478 PYTVVLFDEIEKAHPDVFNMMLQILEDG 505 (693)
Q Consensus 478 ~~~vl~iDEid~l~~~~~~~Ll~~le~g 505 (693)
+..++++||+-.++......++..+..+
T Consensus 261 ~~d~lIIDEaSmv~~~l~~~ll~~~~~~ 288 (359)
T d1w36d1 261 HLDVLVVDEASMIDLPMMSRLIDALPDH 288 (359)
T ss_dssp SCSEEEECSGGGCBHHHHHHHHHTCCTT
T ss_pred CCCEEEEHHHHCCCHHHHHHHHHHHCCC
T ss_conf 5413465332144899999999872599
No 78
>d1lw7a2 c.37.1.1 (A:220-411) Transcriptional regulator NadR, ribosylnicotinamide kinase domain {Haemophilus influenzae [TaxId: 727]}
Probab=97.24 E-value=0.00011 Score=45.70 Aligned_cols=22 Identities=36% Similarity=0.454 Sum_probs=12.3
Q ss_pred EEEECCCCCCHHHHHHHHHHHH
Q ss_conf 9995158892799999999996
Q 005511 409 FIFSGPTGVGKSELAKALAAYY 430 (693)
Q Consensus 409 ill~Gp~GtGKt~lA~~la~~l 430 (693)
++|.||||||||++|+.||+.+
T Consensus 10 I~i~G~~GsGKTTla~~La~~~ 31 (192)
T d1lw7a2 10 VAILGGESSGKSVLVNKLAAVF 31 (192)
T ss_dssp EEEECCTTSHHHHHHHHHHHHT
T ss_pred EEEECCCCCCHHHHHHHHHHHH
T ss_conf 9998999998999999999984
No 79
>d1xp8a1 c.37.1.11 (A:15-282) RecA protein, ATPase-domain {Deinococcus radiodurans [TaxId: 1299]}
Probab=97.22 E-value=0.0038 Score=35.18 Aligned_cols=36 Identities=25% Similarity=0.200 Sum_probs=21.5
Q ss_pred EEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEECCC
Q ss_conf 899951588927999999999963997540553354
Q 005511 408 SFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMS 443 (693)
Q Consensus 408 ~ill~Gp~GtGKt~lA~~la~~l~~~~~~~~~~~~~ 443 (693)
...++||+|||||+++..++...-..+..++++|.-
T Consensus 59 itei~G~~~sGKT~l~l~~~~~aqk~g~~v~yiDtE 94 (268)
T d1xp8a1 59 ITEIYGPESGGKTTLALAIVAQAQKAGGTCAFIDAE 94 (268)
T ss_dssp EEEEEESTTSSHHHHHHHHHHHHHHTTCCEEEEESS
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEECC
T ss_conf 789805876522799999999997079989999887
No 80
>d1g6oa_ c.37.1.11 (A:) Hexameric traffic ATPase, HP0525 {Helicobacter pylori [TaxId: 210]}
Probab=97.21 E-value=0.0012 Score=38.67 Aligned_cols=105 Identities=22% Similarity=0.384 Sum_probs=57.1
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEE-CCCCCCCH--HHHHHHCCCC
Q ss_conf 89999999999997502789999843899951588927999999999963997540553-35432210--0011002899
Q 005511 382 DEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRL-DMSEFMER--HTVSKLIGSP 458 (693)
Q Consensus 382 ~~~i~~l~~~i~~~~~~~~~~~~~~~~ill~Gp~GtGKt~lA~~la~~l~~~~~~~~~~-~~~~~~~~--~~~~~l~g~~ 458 (693)
+.....+..+++... ++++.||+|+|||++.++|...+. .....+.+ +..++.-. .....+..
T Consensus 153 ~~~~~~l~~~v~~~~-----------nili~G~tgSGKTT~l~al~~~i~-~~~rivtiEd~~El~l~~~~~~~~~~~-- 218 (323)
T d1g6oa_ 153 EQAISAIKDGIAIGK-----------NVIVCGGTGSGKTTYIKSIMEFIP-KEERIISIEDTEEIVFKHHKNYTQLFF-- 218 (323)
T ss_dssp HHHHHHHHHHHHHTC-----------CEEEEESTTSSHHHHHHHHGGGSC-TTCCEEEEESSCCCCCSSCSSEEEEEC--
T ss_pred HHHHHHHHHHHHHCC-----------CEEEEEECCCCCHHHHHHHHHHCC-CCCCEEECCCHHHHHCCCCCCCCEECC--
T ss_conf 999999999998378-----------889994035662578999865301-456233113226551111245410014--
Q ss_pred CCCCCCCCCCHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHCCE
Q ss_conf 987676751226699980999899984674229889999999740564
Q 005511 459 PGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGR 506 (693)
Q Consensus 459 ~~~~g~~~~~~l~~~~~~~~~~vl~iDEid~l~~~~~~~Ll~~le~g~ 506 (693)
-.+.+....+..+++ ..+..+++.|+- ++++.. +++.+..|.
T Consensus 219 --~~~~~~~~ll~~~lR-~~pd~iivgEiR--~~ea~~-~l~a~~tGh 260 (323)
T d1g6oa_ 219 --GGNITSADCLKSCLR-MRPDRIILGELR--SSEAYD-FYNVLCSGH 260 (323)
T ss_dssp --BTTBCHHHHHHHHTT-SCCSEEEESCCC--STHHHH-HHHHHHTTC
T ss_pred --CCCHHHHHHHHHHHC-CCCCCCCCCCCC--CHHHHH-HHHHHHHCC
T ss_conf --654249999999743-499854578667--465999-999998169
No 81
>d2i3ba1 c.37.1.11 (A:1-189) Cancer-related NTPase, C1orf57 {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.21 E-value=0.0002 Score=43.94 Aligned_cols=24 Identities=29% Similarity=0.540 Sum_probs=14.7
Q ss_pred EEEEECCCCCCHHHHHHHHHHHHC
Q ss_conf 899951588927999999999963
Q 005511 408 SFIFSGPTGVGKSELAKALAAYYF 431 (693)
Q Consensus 408 ~ill~Gp~GtGKt~lA~~la~~l~ 431 (693)
+++++||||||||++++.++..+.
T Consensus 3 ~v~ItG~~GtGKTtl~~~i~~~l~ 26 (189)
T d2i3ba1 3 HVFLTGPPGVGKTTLIHKASEVLK 26 (189)
T ss_dssp CEEEESCCSSCHHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHHH
T ss_conf 999988999719999999999999
No 82
>d1viaa_ c.37.1.2 (A:) Shikimate kinase (AroK) {Campylobacter jejuni [TaxId: 197]}
Probab=97.20 E-value=0.00014 Score=45.03 Aligned_cols=24 Identities=38% Similarity=0.588 Sum_probs=17.4
Q ss_pred CCEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 980788899971999999999997
Q 005511 64 NNPCLIGEPGVGKTAIAEGLAQRI 87 (693)
Q Consensus 64 ~~ilL~GppGtGKT~la~~la~~l 87 (693)
++++|.|+||+||||+++.+|+.+
T Consensus 1 k~I~liG~~GsGKsTi~k~La~~l 24 (161)
T d1viaa_ 1 KNIVFIGFMGSGKSTLARALAKDL 24 (161)
T ss_dssp CCEEEECCTTSCHHHHHHHHHHHH
T ss_pred CCEEEECCCCCCHHHHHHHHHHHH
T ss_conf 939998999998899999999983
No 83
>d1kaga_ c.37.1.2 (A:) Shikimate kinase (AroK) {Escherichia coli [TaxId: 562]}
Probab=97.20 E-value=0.00011 Score=45.84 Aligned_cols=29 Identities=28% Similarity=0.528 Sum_probs=25.0
Q ss_pred EEEEECCCCCCHHHHHHHHHHHHCCCCCCEEE
Q ss_conf 89995158892799999999996399754055
Q 005511 408 SFIFSGPTGVGKSELAKALAAYYFGSEEAMIR 439 (693)
Q Consensus 408 ~ill~Gp~GtGKt~lA~~la~~l~~~~~~~~~ 439 (693)
+++|.||||+|||++|+.||+.+ +.+++.
T Consensus 4 ~I~l~G~~GsGKSTvak~La~~L---~~~~id 32 (169)
T d1kaga_ 4 NIFLVGPMGAGKSTIGRQLAQQL---NMEFYD 32 (169)
T ss_dssp CEEEECCTTSCHHHHHHHHHHHT---TCEEEE
T ss_pred EEEEECCCCCCHHHHHHHHHHHH---CCCEEE
T ss_conf 49998999999999999999996---999695
No 84
>d2qy9a2 c.37.1.10 (A:285-495) GTPase domain of the signal recognition particle receptor FtsY {Escherichia coli [TaxId: 562]}
Probab=97.18 E-value=0.0025 Score=36.43 Aligned_cols=120 Identities=13% Similarity=0.226 Sum_probs=54.4
Q ss_pred EEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCCHH-----HHHHHCCCCC--CCCCCCCCCHHHHH---HHC
Q ss_conf 3899951588927999999999963997540553354322100-----0110028999--87676751226699---980
Q 005511 407 ASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERH-----TVSKLIGSPP--GYVGYTEGGQLTEA---VRR 476 (693)
Q Consensus 407 ~~ill~Gp~GtGKt~lA~~la~~l~~~~~~~~~~~~~~~~~~~-----~~~~l~g~~~--~~~g~~~~~~l~~~---~~~ 476 (693)
..++|+||+|+|||+.+--||..+-..+.+...+.+..|.-.. ...+..+-+. .+.+.+....+... .+.
T Consensus 10 ~vi~lvGptGvGKTTTiAKLA~~~~~~g~kV~lit~Dt~R~gA~eQL~~~a~~l~v~~~~~~~~~d~~~~l~~~~~~a~~ 89 (211)
T d2qy9a2 10 FVILMVGVNGVGKTTTIGKLARQFEQQGKSVMLAAGDTFRAAAVEQLQVWGQRNNIPVIAQHTGADSASVIFDAIQAAKA 89 (211)
T ss_dssp EEEEEECCTTSCHHHHHHHHHHHHHTTTCCEEEECCCTTCHHHHHHHHHHHHHTTCCEECCSTTCCHHHHHHHHHHHHHH
T ss_pred EEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 79999899999989999999999997799479982321366612045554343388621135687799999999999987
Q ss_pred CCCEEEEECCCCCCCHH--HHHH---HHHHHHCCEEECCCCCEEECCCEEEEEECCCCHHHH
Q ss_conf 99989998467422988--9999---999740564637999833169769999538882566
Q 005511 477 RPYTVVLFDEIEKAHPD--VFNM---MLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVI 533 (693)
Q Consensus 477 ~~~~vl~iDEid~l~~~--~~~~---Ll~~le~g~~~~~~~~~~~~~~~i~I~tsn~~~~~i 533 (693)
....+++||=.-+.+.. ..+. +...++... ......+++++.++.+...+
T Consensus 90 ~~~d~ilIDTaGr~~~d~~~~~el~~l~~~~~~~~-------~~~p~~~~LVl~a~~~~~~~ 144 (211)
T d2qy9a2 90 RNIDVLIADTAGRLQNKSHLMEELKKIVRVMKKLD-------VEAPHEVMLTIDASTGQNAV 144 (211)
T ss_dssp TTCSEEEECCCCCGGGHHHHHHHHHHHHHHHTTTC-------TTCCSEEEEEEEGGGTHHHH
T ss_pred CCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHC-------CCCCCEEEEEHHCCCCCCHH
T ss_conf 69988996568876320778999999999985304-------66860012200123576337
No 85
>d2iyva1 c.37.1.2 (A:2-166) Shikimate kinase (AroK) {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=97.17 E-value=0.00014 Score=45.08 Aligned_cols=24 Identities=38% Similarity=0.697 Sum_probs=16.2
Q ss_pred CCEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 980788899971999999999997
Q 005511 64 NNPCLIGEPGVGKTAIAEGLAQRI 87 (693)
Q Consensus 64 ~~ilL~GppGtGKT~la~~la~~l 87 (693)
+.++|.|+||+||||+++.+|+.+
T Consensus 2 p~IvliG~~G~GKSTig~~La~~l 25 (165)
T d2iyva1 2 PKAVLVGLPGSGKSTIGRRLAKAL 25 (165)
T ss_dssp CSEEEECSTTSSHHHHHHHHHHHH
T ss_pred CCEEEECCCCCCHHHHHHHHHHHH
T ss_conf 948998899998899999999984
No 86
>d1e6ca_ c.37.1.2 (A:) Shikimate kinase (AroK) {Erwinia chrysanthemi [TaxId: 556]}
Probab=97.16 E-value=0.00017 Score=44.52 Aligned_cols=24 Identities=25% Similarity=0.506 Sum_probs=19.1
Q ss_pred CCEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 980788899971999999999997
Q 005511 64 NNPCLIGEPGVGKTAIAEGLAQRI 87 (693)
Q Consensus 64 ~~ilL~GppGtGKT~la~~la~~l 87 (693)
.+++|.|+||+||||+++.+|+.+
T Consensus 3 ~~Iil~G~~GsGKSTia~~LA~~L 26 (170)
T d1e6ca_ 3 EPIFMVGARGCGMTTVGRELARAL 26 (170)
T ss_dssp CCEEEESCTTSSHHHHHHHHHHHH
T ss_pred CCEEEECCCCCCHHHHHHHHHHHH
T ss_conf 988998899998899999999994
No 87
>d1rkba_ c.37.1.1 (A:) Adenylate kinase {Human (Homo sapiens), isoenzyme 6 [TaxId: 9606]}
Probab=97.16 E-value=0.00014 Score=45.08 Aligned_cols=32 Identities=44% Similarity=0.638 Sum_probs=27.2
Q ss_pred CCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEE
Q ss_conf 998078889997199999999999755999998899669998
Q 005511 63 KNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITL 104 (693)
Q Consensus 63 ~~~ilL~GppGtGKT~la~~la~~l~~~~~~~~~~~~~~~~~ 104 (693)
.++++|.||||+||||+|+.+++.+ +.+++..
T Consensus 4 ~~~I~i~G~pGsGKTTia~~La~~l----------~~~~i~~ 35 (173)
T d1rkba_ 4 LPNILLTGTPGVGKTTLGKELASKS----------GLKYINV 35 (173)
T ss_dssp CCCEEEECSTTSSHHHHHHHHHHHH----------CCEEEEH
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHH----------CCCEEEC
T ss_conf 8979898999999899999999997----------9958951
No 88
>d1bifa1 c.37.1.7 (A:37-249) 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase, kinase domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=97.15 E-value=0.002 Score=37.08 Aligned_cols=24 Identities=29% Similarity=0.452 Sum_probs=15.7
Q ss_pred EEEECCCCCHHHHHHHHHHHHHHC
Q ss_conf 078889997199999999999755
Q 005511 66 PCLIGEPGVGKTAIAEGLAQRIAS 89 (693)
Q Consensus 66 ilL~GppGtGKT~la~~la~~l~~ 89 (693)
++++|.||+||||+|+++++.+..
T Consensus 5 i~l~GlpgsGKSTla~~L~~~l~~ 28 (213)
T d1bifa1 5 IVMVGLPARGKTYISKKLTRYLNF 28 (213)
T ss_dssp EEEECCTTSSHHHHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHHHH
T ss_conf 999899999999999999999974
No 89
>d1y63a_ c.37.1.1 (A:) Probable kinase LmjF30.1890 {Leishmania major [TaxId: 5664]}
Probab=97.11 E-value=0.00015 Score=44.82 Aligned_cols=26 Identities=38% Similarity=0.583 Sum_probs=13.4
Q ss_pred CCCCEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 99980788899971999999999997
Q 005511 62 TKNNPCLIGEPGVGKTAIAEGLAQRI 87 (693)
Q Consensus 62 ~~~~ilL~GppGtGKT~la~~la~~l 87 (693)
++.+++|.||||+||||+++.+++.+
T Consensus 4 k~~~I~i~G~~GsGKTT~~~~La~~l 29 (174)
T d1y63a_ 4 KGINILITGTPGTGKTSMAEMIAAEL 29 (174)
T ss_dssp SSCEEEEECSTTSSHHHHHHHHHHHS
T ss_pred CCCEEEEEECCCCCHHHHHHHHHHHH
T ss_conf 98889998289998899999999985
No 90
>d1j8yf2 c.37.1.10 (F:87-297) GTPase domain of the signal sequence recognition protein Ffh {Archaeon Acidianus ambivalens [TaxId: 2283]}
Probab=97.09 E-value=0.0028 Score=36.07 Aligned_cols=44 Identities=20% Similarity=0.289 Sum_probs=22.5
Q ss_pred CCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCC
Q ss_conf 99984389995158892799999999996399754055335432
Q 005511 402 PNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEF 445 (693)
Q Consensus 402 ~~~~~~~ill~Gp~GtGKt~lA~~la~~l~~~~~~~~~~~~~~~ 445 (693)
|.+.+..++|+||+|+|||+.+--||..+-..+.+...+.+..+
T Consensus 8 ~~k~p~vi~lvGptGvGKTTTiAKLA~~~~~~g~kV~lit~Dt~ 51 (211)
T d1j8yf2 8 PDKIPYVIMLVGVQGTGKATTAGKLAYFYKKKGFKVGLVGADVY 51 (211)
T ss_dssp CSSSSEEEEEECSCCC----HHHHHHHHHHHTTCCEEEEECCCS
T ss_pred CCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECC
T ss_conf 99999899998999999899999999999977993699972023
No 91
>d1lw7a2 c.37.1.1 (A:220-411) Transcriptional regulator NadR, ribosylnicotinamide kinase domain {Haemophilus influenzae [TaxId: 727]}
Probab=97.09 E-value=0.00016 Score=44.56 Aligned_cols=26 Identities=19% Similarity=0.348 Sum_probs=23.9
Q ss_pred CCCCEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 99980788899971999999999997
Q 005511 62 TKNNPCLIGEPGVGKTAIAEGLAQRI 87 (693)
Q Consensus 62 ~~~~ilL~GppGtGKT~la~~la~~l 87 (693)
..+.|++.|||||||||+|++|++.+
T Consensus 6 ~~K~I~i~G~~GsGKTTla~~La~~~ 31 (192)
T d1lw7a2 6 FAKTVAILGGESSGKSVLVNKLAAVF 31 (192)
T ss_dssp TCEEEEEECCTTSHHHHHHHHHHHHT
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHH
T ss_conf 63289998999998999999999984
No 92
>d1cr2a_ c.37.1.11 (A:) Gene 4 protein (g4p, DNA primase), helicase domain {Bacteriophage T7 [TaxId: 10760]}
Probab=97.07 E-value=0.0057 Score=33.94 Aligned_cols=40 Identities=23% Similarity=0.236 Sum_probs=25.0
Q ss_pred CCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEC
Q ss_conf 9999807888999719999999999975599999889966999865
Q 005511 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDM 106 (693)
Q Consensus 61 ~~~~~ilL~GppGtGKT~la~~la~~l~~~~~~~~~~~~~~~~~~~ 106 (693)
.+..-+++.|+||+|||+++..++..+... .+.++.++++
T Consensus 33 ~~G~l~vi~G~~G~GKT~~~~~la~~~a~~------~g~~v~~~s~ 72 (277)
T d1cr2a_ 33 RGGEVIMVTSGSGMGKSTFVRQQALQWGTA------MGKKVGLAML 72 (277)
T ss_dssp CTTCEEEEECSTTSSHHHHHHHHHHHHHHT------SCCCEEEEES
T ss_pred CCCEEEEEEECCCCCHHHHHHHHHHHHHHH------CCCCEEEEEE
T ss_conf 898089999479997999999999726553------3663457640
No 93
>d1vmaa2 c.37.1.10 (A:82-294) GTPase domain of the signal recognition particle receptor FtsY {Thermotoga maritima [TaxId: 2336]}
Probab=97.03 E-value=0.0033 Score=35.55 Aligned_cols=40 Identities=18% Similarity=0.312 Sum_probs=20.4
Q ss_pred CEEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCC
Q ss_conf 4389995158892799999999996399754055335432
Q 005511 406 IASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEF 445 (693)
Q Consensus 406 ~~~ill~Gp~GtGKt~lA~~la~~l~~~~~~~~~~~~~~~ 445 (693)
+..++|+||+|+|||+.+--||..+...+.+...+.+..|
T Consensus 11 p~vi~lvGptGvGKTTTiAKLAa~~~~~~~kV~lit~Dt~ 50 (213)
T d1vmaa2 11 PFVIMVVGVNGTGKTTSCGKLAKMFVDEGKSVVLAAADTF 50 (213)
T ss_dssp CEEEEEECCTTSSHHHHHHHHHHHHHHTTCCEEEEEECTT
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCC
T ss_conf 9899998999998899999999999977990699960133
No 94
>d1qf9a_ c.37.1.1 (A:) UMP/CMP kinase {Dictyostelium discoideum [TaxId: 44689]}
Probab=97.02 E-value=0.00025 Score=43.34 Aligned_cols=22 Identities=18% Similarity=0.345 Sum_probs=13.1
Q ss_pred EEEECCCCCCHHHHHHHHHHHH
Q ss_conf 9995158892799999999996
Q 005511 409 FIFSGPTGVGKSELAKALAAYY 430 (693)
Q Consensus 409 ill~Gp~GtGKt~lA~~la~~l 430 (693)
+++.||||+|||++|+.||+.+
T Consensus 9 I~i~G~pGSGKsT~a~~La~~~ 30 (194)
T d1qf9a_ 9 VFVLGGPGSGKGTQCANIVRDF 30 (194)
T ss_dssp EEEEESTTSSHHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHH
T ss_conf 9998999998899999999997
No 95
>d1okkd2 c.37.1.10 (D:97-303) GTPase domain of the signal recognition particle receptor FtsY {Thermus aquaticus [TaxId: 271]}
Probab=97.01 E-value=0.0078 Score=33.02 Aligned_cols=122 Identities=18% Similarity=0.291 Sum_probs=50.5
Q ss_pred EEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCCHH-----HHHHHCCCCC--CCCCCCCCCHHHHH---HHCC
Q ss_conf 899951588927999999999963997540553354322100-----0110028999--87676751226699---9809
Q 005511 408 SFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERH-----TVSKLIGSPP--GYVGYTEGGQLTEA---VRRR 477 (693)
Q Consensus 408 ~ill~Gp~GtGKt~lA~~la~~l~~~~~~~~~~~~~~~~~~~-----~~~~l~g~~~--~~~g~~~~~~l~~~---~~~~ 477 (693)
.++|+||+|+|||+.+--||..+-..+.+...+.+-.|.... ...+..+-+. .+.+.+....+... .+..
T Consensus 8 vi~lvGptGvGKTTTiaKLA~~~~~~g~kV~lit~Dt~R~gA~eQL~~~a~~l~i~~~~~~~~~d~~~~~~~~~~~~~~~ 87 (207)
T d1okkd2 8 VVLVVGVNGVGKTTTIAKLGRYYQNLGKKVMFCAGDTFRAAGGTQLSEWGKRLSIPVIQGPEGTDPAALAYDAVQAMKAR 87 (207)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHHTTTCCEEEECCCCSSTTHHHHHHHHHHHHTCCEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHC
T ss_conf 99998999998899999999999977990799981366654026676405456823896167742788999989999987
Q ss_pred CCEEEEECCCCCCCH--HHHHHHHHHHHCCEEECCCCCEEECCCEEEEEECCCCHHHH
Q ss_conf 998999846742298--89999999740564637999833169769999538882566
Q 005511 478 PYTVVLFDEIEKAHP--DVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVI 533 (693)
Q Consensus 478 ~~~vl~iDEid~l~~--~~~~~Ll~~le~g~~~~~~~~~~~~~~~i~I~tsn~~~~~i 533 (693)
...+++||=+-+.+. .....|..+.+.-...+. .....+++++.++.+...+
T Consensus 88 ~~d~ilIDTaGr~~~d~~l~~el~~~~~~~~~~~~----~~p~~~~LVl~a~~~~~~~ 141 (207)
T d1okkd2 88 GYDLLFVDTAGRLHTKHNLMEELKKVKRAIAKADP----EEPKEVWLVLDAVTGQNGL 141 (207)
T ss_dssp TCSEEEECCCCCCTTCHHHHHHHHHHHHHHHHHCT----TCCSEEEEEEETTBCTHHH
T ss_pred CCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCC----CCCCEEEEEEECCCCCHHH
T ss_conf 99999717522231127788887777777653256----7873599996200471678
No 96
>d1zaka1 c.37.1.1 (A:3-127,A:159-222) Adenylate kinase {Maize (Zea mays) [TaxId: 4577]}
Probab=97.00 E-value=0.00027 Score=43.12 Aligned_cols=22 Identities=23% Similarity=0.456 Sum_probs=12.8
Q ss_pred EEEECCCCCCHHHHHHHHHHHH
Q ss_conf 9995158892799999999996
Q 005511 409 FIFSGPTGVGKSELAKALAAYY 430 (693)
Q Consensus 409 ill~Gp~GtGKt~lA~~la~~l 430 (693)
++|.||||+|||++|+.|++.+
T Consensus 6 I~i~GppGsGKsT~a~~La~~~ 27 (189)
T d1zaka1 6 VMISGAPASGKGTQCELIKTKY 27 (189)
T ss_dssp EEEEESTTSSHHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHH
T ss_conf 9998899999899999999987
No 97
>d2iyva1 c.37.1.2 (A:2-166) Shikimate kinase (AroK) {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=97.00 E-value=0.00024 Score=43.47 Aligned_cols=30 Identities=27% Similarity=0.439 Sum_probs=25.5
Q ss_pred EEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEC
Q ss_conf 999515889279999999999639975405533
Q 005511 409 FIFSGPTGVGKSELAKALAAYYFGSEEAMIRLD 441 (693)
Q Consensus 409 ill~Gp~GtGKt~lA~~la~~l~~~~~~~~~~~ 441 (693)
++|.|+||+|||++++.||+.+ +.+|+..|
T Consensus 4 IvliG~~G~GKSTig~~La~~l---~~~fiD~D 33 (165)
T d2iyva1 4 AVLVGLPGSGKSTIGRRLAKAL---GVGLLDTD 33 (165)
T ss_dssp EEEECSTTSSHHHHHHHHHHHH---TCCEEEHH
T ss_pred EEEECCCCCCHHHHHHHHHHHH---CCCEEEEC
T ss_conf 8998899998899999999984---99869602
No 98
>d1ls1a2 c.37.1.10 (A:89-295) GTPase domain of the signal sequence recognition protein Ffh {Thermus aquaticus [TaxId: 271]}
Probab=96.99 E-value=0.0043 Score=34.82 Aligned_cols=39 Identities=26% Similarity=0.382 Sum_probs=20.0
Q ss_pred EEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCC
Q ss_conf 389995158892799999999996399754055335432
Q 005511 407 ASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEF 445 (693)
Q Consensus 407 ~~ill~Gp~GtGKt~lA~~la~~l~~~~~~~~~~~~~~~ 445 (693)
..++|+||+|+|||+.+--||..+-..+.+...+.+..+
T Consensus 11 ~vi~lvGp~GvGKTTTiaKLA~~~~~~g~kV~lit~Dt~ 49 (207)
T d1ls1a2 11 NLWFLVGLQGSGKTTTAAKLALYYKGKGRRPLLVAADTQ 49 (207)
T ss_dssp EEEEEECCTTTTHHHHHHHHHHHHHHTTCCEEEEECCSS
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCC
T ss_conf 689998999998899999999999977992799954434
No 99
>d1p9ra_ c.37.1.11 (A:) Extracellular secretion NTPase EpsE {Vibrio cholerae [TaxId: 666]}
Probab=96.99 E-value=0.0047 Score=34.53 Aligned_cols=116 Identities=16% Similarity=0.210 Sum_probs=70.8
Q ss_pred CCCCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECC-CCC-CCC---
Q ss_conf 999876688899999999970399998078889997199999999999755999998899669998652-101-397---
Q 005511 39 GKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMG-LLV-AGT--- 113 (693)
Q Consensus 39 ~~~~~ivG~~~~~~~l~~~l~~~~~~~ilL~GppGtGKT~la~~la~~l~~~~~~~~~~~~~~~~~~~~-~~~-~~~--- 113 (693)
.+++++--.+.++..+.+++. .+..-+|+.||+|+||||...++...++.. ...++.+.-. ++. .+.
T Consensus 135 ~~l~~LG~~~~~~~~l~~l~~-~~~GliLvtGpTGSGKSTTl~~~l~~~~~~-------~~~i~tiEdPiE~~~~~~~q~ 206 (401)
T d1p9ra_ 135 LDLHSLGMTAHNHDNFRRLIK-RPHGIILVTGPTGSGKSTTLYAGLQELNSS-------ERNILTVEDPIEFDIDGIGQT 206 (401)
T ss_dssp CCGGGSCCCHHHHHHHHHHHT-SSSEEEEEECSTTSCHHHHHHHHHHHHCCT-------TSCEEEEESSCCSCCSSSEEE
T ss_pred HHHHHHCCCHHHHHHHHHHHH-HHHCEEEEECCCCCCCCHHHHHHHHHHCCC-------CCEEEEECCCCCCCCCCCCEE
T ss_conf 014430135777899999986-410548987678777447799986662578-------746999626743456788702
Q ss_pred CCCCHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHCCCCCCHHHHHHHHHHHHCCCCCE
Q ss_conf 44661899999999999708984999916003310899988476999883311079817
Q 005511 114 KYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQ 172 (693)
Q Consensus 114 ~~~g~~~~~~~~~~~~~~~~~~~iL~iDEid~l~~~~~~~~~~~~~~~L~~~l~~~~i~ 172 (693)
...+.....+...+..+...+|-++++.|+-... ...........|+.+
T Consensus 207 ~v~~~~~~~~~~~l~~~lR~dPDvi~igEiRd~~----------ta~~a~~aa~tGhlV 255 (401)
T d1p9ra_ 207 QVNPRVDMTFARGLRAILRQDPDVVMVGEIRDLE----------TAQIAVQASLTGHLV 255 (401)
T ss_dssp ECBGGGTBCHHHHHHHHGGGCCSEEEESCCCSHH----------HHHHHHHHHHTTCEE
T ss_pred EECCCCCCCHHHHHHHHHHHCCCEEEECCCCCHH----------HHHHHHHHHHCCCEE
T ss_conf 6558767799999999984138889845768759----------999999997249858
No 100
>d1ls1a2 c.37.1.10 (A:89-295) GTPase domain of the signal sequence recognition protein Ffh {Thermus aquaticus [TaxId: 271]}
Probab=96.98 E-value=0.0056 Score=34.02 Aligned_cols=37 Identities=30% Similarity=0.350 Sum_probs=26.8
Q ss_pred CCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECC
Q ss_conf 98078889997199999999999755999998899669998652
Q 005511 64 NNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMG 107 (693)
Q Consensus 64 ~~ilL~GppGtGKT~la~~la~~l~~~~~~~~~~~~~~~~~~~~ 107 (693)
+-++|.||+|+||||.+-.+|..+... +.++..+.+.
T Consensus 11 ~vi~lvGp~GvGKTTTiaKLA~~~~~~-------g~kV~lit~D 47 (207)
T d1ls1a2 11 NLWFLVGLQGSGKTTTAAKLALYYKGK-------GRRPLLVAAD 47 (207)
T ss_dssp EEEEEECCTTTTHHHHHHHHHHHHHHT-------TCCEEEEECC
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHHHC-------CCCEEEEECC
T ss_conf 689998999998899999999999977-------9927999544
No 101
>d1e6ca_ c.37.1.2 (A:) Shikimate kinase (AroK) {Erwinia chrysanthemi [TaxId: 556]}
Probab=96.97 E-value=0.00026 Score=43.20 Aligned_cols=30 Identities=17% Similarity=0.347 Sum_probs=25.4
Q ss_pred EEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEE
Q ss_conf 899951588927999999999963997540553
Q 005511 408 SFIFSGPTGVGKSELAKALAAYYFGSEEAMIRL 440 (693)
Q Consensus 408 ~ill~Gp~GtGKt~lA~~la~~l~~~~~~~~~~ 440 (693)
+++|.|+||+|||++|+.||+.+ +.+|+..
T Consensus 4 ~Iil~G~~GsGKSTia~~LA~~L---g~~~id~ 33 (170)
T d1e6ca_ 4 PIFMVGARGCGMTTVGRELARAL---GYEFVDT 33 (170)
T ss_dssp CEEEESCTTSSHHHHHHHHHHHH---TCEEEEH
T ss_pred CEEEECCCCCCHHHHHHHHHHHH---CCCEEEH
T ss_conf 88998899998899999999994---9987865
No 102
>d1qf9a_ c.37.1.1 (A:) UMP/CMP kinase {Dictyostelium discoideum [TaxId: 44689]}
Probab=96.97 E-value=0.00031 Score=42.66 Aligned_cols=28 Identities=21% Similarity=0.453 Sum_probs=24.3
Q ss_pred CCCCCCEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 3999980788899971999999999997
Q 005511 60 RRTKNNPCLIGEPGVGKTAIAEGLAQRI 87 (693)
Q Consensus 60 ~~~~~~ilL~GppGtGKT~la~~la~~l 87 (693)
.+.|.-+++.||||+||||+|+.+|+.+
T Consensus 3 ~~kp~iI~i~G~pGSGKsT~a~~La~~~ 30 (194)
T d1qf9a_ 3 KSKPNVVFVLGGPGSGKGTQCANIVRDF 30 (194)
T ss_dssp CCCCEEEEEEESTTSSHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCCCHHHHHHHHHHHH
T ss_conf 8899489998999998899999999997
No 103
>d1viaa_ c.37.1.2 (A:) Shikimate kinase (AroK) {Campylobacter jejuni [TaxId: 197]}
Probab=96.96 E-value=0.00026 Score=43.15 Aligned_cols=31 Identities=39% Similarity=0.552 Sum_probs=26.2
Q ss_pred EEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEC
Q ss_conf 8999515889279999999999639975405533
Q 005511 408 SFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLD 441 (693)
Q Consensus 408 ~ill~Gp~GtGKt~lA~~la~~l~~~~~~~~~~~ 441 (693)
+++|.|+||+|||++++.||+.+ +.+|+..|
T Consensus 2 ~I~liG~~GsGKsTi~k~La~~l---~~~~~d~d 32 (161)
T d1viaa_ 2 NIVFIGFMGSGKSTLARALAKDL---DLVFLDSD 32 (161)
T ss_dssp CEEEECCTTSCHHHHHHHHHHHH---TCEEEEHH
T ss_pred CEEEECCCCCCHHHHHHHHHHHH---CCCEEECC
T ss_conf 39998999998899999999983---99878367
No 104
>d1u0ja_ c.37.1.20 (A:) Rep 40 protein helicase domain {Adeno-associated virus 2, AAV2 [TaxId: 10804]}
Probab=96.96 E-value=0.0033 Score=35.57 Aligned_cols=93 Identities=14% Similarity=0.188 Sum_probs=52.6
Q ss_pred EEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCEEEEECC
Q ss_conf 38999515889279999999999639975405533543221000110028999876767512266999809998999846
Q 005511 407 ASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDE 486 (693)
Q Consensus 407 ~~ill~Gp~GtGKt~lA~~la~~l~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~g~~~~~~l~~~~~~~~~~vl~iDE 486 (693)
..+.|+||+++|||+++.++...+ +. . ..++- +.+. + .........++++||
T Consensus 105 n~~~l~G~~~tGKS~f~~~i~~~l-g~-~--~~~~~-------~~~~-------f----------~l~~l~~k~~~~~~e 156 (267)
T d1u0ja_ 105 NTIWLFGPATTGKTNIAEAIAHTV-PF-Y--GCVNW-------TNEN-------F----------PFNDCVDKMVIWWEE 156 (267)
T ss_dssp CEEEEECSTTSSHHHHHHHHHHHS-SC-E--EECCT-------TCSS-------C----------TTGGGSSCSEEEECS
T ss_pred EEEEEECCCCCCHHHHHHHHHHHH-CC-H--HHCCC-------CCCC-------C----------CCCCCCCCEEEEEEC
T ss_conf 799998589887789999999983-62-0--20026-------6788-------6----------220037987999838
Q ss_pred CCCCCHHHHHHHHHHHHCCEEECCC--CCEEECC-CEEEEEECCC
Q ss_conf 7422988999999974056463799--9833169-7699995388
Q 005511 487 IEKAHPDVFNMMLQILEDGRLTDSK--GRTVDFK-NTLLIMTSNV 528 (693)
Q Consensus 487 id~l~~~~~~~Ll~~le~g~~~~~~--~~~~~~~-~~i~I~tsn~ 528 (693)
...-. ...+.+..++.+..+.-.. ...+.+. ..++|.++|.
T Consensus 157 ~~~~~-~~~~~~K~l~gGd~i~v~~K~k~~~~~~~~p~li~s~n~ 200 (267)
T d1u0ja_ 157 GKMTA-KVVESAKAILGGSKVRVDQKCKSSAQIDPTPVIVTSNTN 200 (267)
T ss_dssp CCEET-TTHHHHHHHHTTCCEEC------CCEECCCCEEEEESSC
T ss_pred CCCCC-CHHHHHHHHCCCCCEEEECCCCCCCEEECCEEEEEECCC
T ss_conf 88530-078999986489936853203897074077089994897
No 105
>d1zaka1 c.37.1.1 (A:3-127,A:159-222) Adenylate kinase {Maize (Zea mays) [TaxId: 4577]}
Probab=96.95 E-value=0.00037 Score=42.12 Aligned_cols=26 Identities=19% Similarity=0.267 Sum_probs=23.8
Q ss_pred CCCCEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 99980788899971999999999997
Q 005511 62 TKNNPCLIGEPGVGKTAIAEGLAQRI 87 (693)
Q Consensus 62 ~~~~ilL~GppGtGKT~la~~la~~l 87 (693)
.|-.++|.||||+||||+|+.+++.+
T Consensus 2 ~Pm~I~i~GppGsGKsT~a~~La~~~ 27 (189)
T d1zaka1 2 DPLKVMISGAPASGKGTQCELIKTKY 27 (189)
T ss_dssp CSCCEEEEESTTSSHHHHHHHHHHHH
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHH
T ss_conf 97299998899999899999999987
No 106
>d1ak2a1 c.37.1.1 (A:14-146,A:177-233) Adenylate kinase {Cow (Bos taurus), mitochondrial izozyme-2 [TaxId: 9913]}
Probab=96.94 E-value=0.00057 Score=40.83 Aligned_cols=25 Identities=36% Similarity=0.559 Sum_probs=16.4
Q ss_pred CCCEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 9980788899971999999999997
Q 005511 63 KNNPCLIGEPGVGKTAIAEGLAQRI 87 (693)
Q Consensus 63 ~~~ilL~GppGtGKT~la~~la~~l 87 (693)
...++|.||||+||||+|+.+|+.+
T Consensus 3 ~~riil~G~pGSGKsT~a~~La~~~ 27 (190)
T d1ak2a1 3 GVRAVLLGPPGAGKGTQAPKLAKNF 27 (190)
T ss_dssp CCEEEEECCTTSSHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHH
T ss_conf 6389998999998899999999986
No 107
>d1qhxa_ c.37.1.3 (A:) Chloramphenicol phosphotransferase {Streptomyces venezuelae [TaxId: 54571]}
Probab=96.94 E-value=0.00048 Score=41.34 Aligned_cols=22 Identities=27% Similarity=0.546 Sum_probs=12.5
Q ss_pred EEEECCCCCCHHHHHHHHHHHH
Q ss_conf 9995158892799999999996
Q 005511 409 FIFSGPTGVGKSELAKALAAYY 430 (693)
Q Consensus 409 ill~Gp~GtGKt~lA~~la~~l 430 (693)
++|.||||+|||++|+.|++.+
T Consensus 6 I~l~G~~GsGKsTva~~L~~~l 27 (178)
T d1qhxa_ 6 IILNGGSSAGKSGIVRCLQSVL 27 (178)
T ss_dssp EEEECCTTSSHHHHHHHHHHHS
T ss_pred EEEECCCCCCHHHHHHHHHHHC
T ss_conf 9998999999899999999972
No 108
>d1okkd2 c.37.1.10 (D:97-303) GTPase domain of the signal recognition particle receptor FtsY {Thermus aquaticus [TaxId: 271]}
Probab=96.93 E-value=0.0032 Score=35.71 Aligned_cols=40 Identities=28% Similarity=0.279 Sum_probs=28.5
Q ss_pred CCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECC
Q ss_conf 99998078889997199999999999755999998899669998652
Q 005511 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMG 107 (693)
Q Consensus 61 ~~~~~ilL~GppGtGKT~la~~la~~l~~~~~~~~~~~~~~~~~~~~ 107 (693)
+.+.-++|+||+|+||||.+-.+|..+... +.++..+.+.
T Consensus 4 ~~~~vi~lvGptGvGKTTTiaKLA~~~~~~-------g~kV~lit~D 43 (207)
T d1okkd2 4 PKGRVVLVVGVNGVGKTTTIAKLGRYYQNL-------GKKVMFCAGD 43 (207)
T ss_dssp CSSSEEEEECSTTSSHHHHHHHHHHHHHTT-------TCCEEEECCC
T ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHHHHC-------CCCEEEEEEC
T ss_conf 997799998999998899999999999977-------9907999813
No 109
>d1knqa_ c.37.1.17 (A:) Gluconate kinase {Escherichia coli [TaxId: 562]}
Probab=96.92 E-value=0.00037 Score=42.17 Aligned_cols=22 Identities=36% Similarity=0.643 Sum_probs=11.2
Q ss_pred EEEECCCCCHHHHHHHHHHHHH
Q ss_conf 0788899971999999999997
Q 005511 66 PCLIGEPGVGKTAIAEGLAQRI 87 (693)
Q Consensus 66 ilL~GppGtGKT~la~~la~~l 87 (693)
++|.||||+||||+++.+++.+
T Consensus 9 ivl~G~~GsGKsT~a~~La~~l 30 (171)
T d1knqa_ 9 YVLMGVSGSGKSAVASEVAHQL 30 (171)
T ss_dssp EEEECSTTSCHHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHH
T ss_conf 9998999989899999999986
No 110
>d1j8yf2 c.37.1.10 (F:87-297) GTPase domain of the signal sequence recognition protein Ffh {Archaeon Acidianus ambivalens [TaxId: 2283]}
Probab=96.92 E-value=0.0019 Score=37.27 Aligned_cols=37 Identities=30% Similarity=0.237 Sum_probs=26.3
Q ss_pred CCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEC
Q ss_conf 99807888999719999999999975599999889966999865
Q 005511 63 KNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDM 106 (693)
Q Consensus 63 ~~~ilL~GppGtGKT~la~~la~~l~~~~~~~~~~~~~~~~~~~ 106 (693)
|.-++|.||+|+||||.+-.+|..+... +.++..+.+
T Consensus 12 p~vi~lvGptGvGKTTTiAKLA~~~~~~-------g~kV~lit~ 48 (211)
T d1j8yf2 12 PYVIMLVGVQGTGKATTAGKLAYFYKKK-------GFKVGLVGA 48 (211)
T ss_dssp SEEEEEECSCCC----HHHHHHHHHHHT-------TCCEEEEEC
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHHHHC-------CCCEEEEEE
T ss_conf 9899998999999899999999999977-------993699972
No 111
>d1zp6a1 c.37.1.25 (A:6-181) Hypothetical protein Atu3015 {Agrobacterium tumefaciens [TaxId: 358]}
Probab=96.92 E-value=0.00019 Score=44.16 Aligned_cols=34 Identities=38% Similarity=0.499 Sum_probs=21.3
Q ss_pred CCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECC
Q ss_conf 98078889997199999999999755999998899669998652
Q 005511 64 NNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMG 107 (693)
Q Consensus 64 ~~ilL~GppGtGKT~la~~la~~l~~~~~~~~~~~~~~~~~~~~ 107 (693)
.-++|.||||+||||+++.+++.+ +.+++.++..
T Consensus 5 ~iI~l~G~~GsGKSTia~~La~~l----------g~~~~~~~~d 38 (176)
T d1zp6a1 5 NILLLSGHPGSGKSTIAEALANLP----------GVPKVHFHSD 38 (176)
T ss_dssp EEEEEEECTTSCHHHHHHHHHTCS----------SSCEEEECTT
T ss_pred EEEEEECCCCCCHHHHHHHHHHHH----------CCCEEEECHH
T ss_conf 599998899998899999999995----------9997990689
No 112
>d1x6va3 c.37.1.4 (A:34-228) Adenosine-5'phosphosulfate kinase (APS kinase) {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.91 E-value=0.00024 Score=43.48 Aligned_cols=24 Identities=29% Similarity=0.595 Sum_probs=18.1
Q ss_pred EEEEECCCCCCHHHHHHHHHHHHC
Q ss_conf 899951588927999999999963
Q 005511 408 SFIFSGPTGVGKSELAKALAAYYF 431 (693)
Q Consensus 408 ~ill~Gp~GtGKt~lA~~la~~l~ 431 (693)
.++|+|+||+|||++|+.||+.+.
T Consensus 21 vI~L~G~pGSGKTTiAk~La~~l~ 44 (195)
T d1x6va3 21 TVWLTGLSGAGKTTVSMALEEYLV 44 (195)
T ss_dssp EEEEESSCHHHHHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHHH
T ss_conf 999889999999999999999997
No 113
>d2bdta1 c.37.1.25 (A:1-176) Hypothetical protein BH3686 {Bacillus halodurans [TaxId: 86665]}
Probab=96.91 E-value=0.00044 Score=41.63 Aligned_cols=22 Identities=55% Similarity=0.866 Sum_probs=14.4
Q ss_pred EEEECCCCCCHHHHHHHHHHHH
Q ss_conf 9995158892799999999996
Q 005511 409 FIFSGPTGVGKSELAKALAAYY 430 (693)
Q Consensus 409 ill~Gp~GtGKt~lA~~la~~l 430 (693)
+++.||||+|||++|+.|++.+
T Consensus 5 I~i~G~~GsGKTTva~~L~~~~ 26 (176)
T d2bdta1 5 YIITGPAGVGKSTTCKRLAAQL 26 (176)
T ss_dssp EEEECSTTSSHHHHHHHHHHHS
T ss_pred EEEECCCCCCHHHHHHHHHHHC
T ss_conf 9998999999899999999980
No 114
>d1knqa_ c.37.1.17 (A:) Gluconate kinase {Escherichia coli [TaxId: 562]}
Probab=96.90 E-value=0.00063 Score=40.54 Aligned_cols=30 Identities=27% Similarity=0.479 Sum_probs=24.2
Q ss_pred EEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEE
Q ss_conf 389995158892799999999996399754055
Q 005511 407 ASFIFSGPTGVGKSELAKALAAYYFGSEEAMIR 439 (693)
Q Consensus 407 ~~ill~Gp~GtGKt~lA~~la~~l~~~~~~~~~ 439 (693)
..++|.||||+|||++|+.|++.+ +.+++.
T Consensus 7 ~iivl~G~~GsGKsT~a~~La~~l---~~~~~~ 36 (171)
T d1knqa_ 7 HIYVLMGVSGSGKSAVASEVAHQL---HAAFLD 36 (171)
T ss_dssp EEEEEECSTTSCHHHHHHHHHHHH---TCEEEE
T ss_pred EEEEEECCCCCCHHHHHHHHHHHH---CCCEEC
T ss_conf 189998999989899999999986---978310
No 115
>d1nlfa_ c.37.1.11 (A:) Hexameric replicative helicase repA {Escherichia coli [TaxId: 562]}
Probab=96.89 E-value=0.01 Score=32.18 Aligned_cols=27 Identities=33% Similarity=0.430 Sum_probs=22.2
Q ss_pred CCCEEEECCCCCHHHHHHHHHHHHHHC
Q ss_conf 998078889997199999999999755
Q 005511 63 KNNPCLIGEPGVGKTAIAEGLAQRIAS 89 (693)
Q Consensus 63 ~~~ilL~GppGtGKT~la~~la~~l~~ 89 (693)
..-.+++|+||+|||+++..+|..+..
T Consensus 29 g~~~~i~G~~G~GKS~l~l~la~~ia~ 55 (274)
T d1nlfa_ 29 GTVGALVSPGGAGKSMLALQLAAQIAG 55 (274)
T ss_dssp TSEEEEEESTTSSHHHHHHHHHHHHHT
T ss_pred CCEEEEEECCCCCHHHHHHHHHHHHHC
T ss_conf 958999928999899999999999976
No 116
>d2qy9a2 c.37.1.10 (A:285-495) GTPase domain of the signal recognition particle receptor FtsY {Escherichia coli [TaxId: 562]}
Probab=96.87 E-value=0.011 Score=32.08 Aligned_cols=38 Identities=29% Similarity=0.343 Sum_probs=26.7
Q ss_pred CCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEC
Q ss_conf 999807888999719999999999975599999889966999865
Q 005511 62 TKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDM 106 (693)
Q Consensus 62 ~~~~ilL~GppGtGKT~la~~la~~l~~~~~~~~~~~~~~~~~~~ 106 (693)
.|.-++|.||+|+||||.+-.+|..+... +.++.-+.+
T Consensus 8 ~p~vi~lvGptGvGKTTTiAKLA~~~~~~-------g~kV~lit~ 45 (211)
T d2qy9a2 8 APFVILMVGVNGVGKTTTIGKLARQFEQQ-------GKSVMLAAG 45 (211)
T ss_dssp TTEEEEEECCTTSCHHHHHHHHHHHHHTT-------TCCEEEECC
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHHC-------CCCEEEEEC
T ss_conf 99799998999999899999999999977-------994799823
No 117
>d2i3ba1 c.37.1.11 (A:1-189) Cancer-related NTPase, C1orf57 {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.82 E-value=0.00044 Score=41.60 Aligned_cols=27 Identities=33% Similarity=0.554 Sum_probs=24.6
Q ss_pred CCEEEECCCCCHHHHHHHHHHHHHHCC
Q ss_conf 980788899971999999999997559
Q 005511 64 NNPCLIGEPGVGKTAIAEGLAQRIASG 90 (693)
Q Consensus 64 ~~ilL~GppGtGKT~la~~la~~l~~~ 90 (693)
++++++||||||||++++.++..+...
T Consensus 2 k~v~ItG~~GtGKTtl~~~i~~~l~~~ 28 (189)
T d2i3ba1 2 RHVFLTGPPGVGKTTLIHKASEVLKSS 28 (189)
T ss_dssp CCEEEESCCSSCHHHHHHHHHHHHHHT
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHHHC
T ss_conf 699998899971999999999999977
No 118
>d1w36d1 c.37.1.19 (D:2-360) Exodeoxyribonuclease V alpha chain (RecD) {Escherichia coli [TaxId: 562]}
Probab=96.81 E-value=0.0047 Score=34.50 Aligned_cols=23 Identities=30% Similarity=0.372 Sum_probs=17.1
Q ss_pred EEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 89995158892799999999996
Q 005511 408 SFIFSGPTGVGKSELAKALAAYY 430 (693)
Q Consensus 408 ~ill~Gp~GtGKt~lA~~la~~l 430 (693)
..++.||||||||++...+...+
T Consensus 165 ~~vI~G~pGTGKTt~i~~~l~~l 187 (359)
T d1w36d1 165 ISVISGGPGTGKTTTVAKLLAAL 187 (359)
T ss_dssp EEEEECCTTSTHHHHHHHHHHHH
T ss_pred EEEEECCCCCCCEEHHHHHHHHH
T ss_conf 59997689887521699999999
No 119
>d1m8pa3 c.37.1.15 (A:391-573) ATP sulfurylase C-terminal domain {Fungus (Penicillium chrysogenum) [TaxId: 5076]}
Probab=96.81 E-value=0.00069 Score=40.27 Aligned_cols=23 Identities=26% Similarity=0.463 Sum_probs=16.6
Q ss_pred EEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 89995158892799999999996
Q 005511 408 SFIFSGPTGVGKSELAKALAAYY 430 (693)
Q Consensus 408 ~ill~Gp~GtGKt~lA~~la~~l 430 (693)
.++|+|+||+|||++|+.||+.+
T Consensus 8 ~I~l~G~~GsGKTTia~~La~~L 30 (183)
T d1m8pa3 8 TIFLTGYMNSGKDAIARALQVTL 30 (183)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHH
T ss_conf 99988999999999999999998
No 120
>d1m8pa3 c.37.1.15 (A:391-573) ATP sulfurylase C-terminal domain {Fungus (Penicillium chrysogenum) [TaxId: 5076]}
Probab=96.81 E-value=0.00041 Score=41.85 Aligned_cols=27 Identities=30% Similarity=0.268 Sum_probs=23.2
Q ss_pred CCEEEECCCCCHHHHHHHHHHHHHHCC
Q ss_conf 980788899971999999999997559
Q 005511 64 NNPCLIGEPGVGKTAIAEGLAQRIASG 90 (693)
Q Consensus 64 ~~ilL~GppGtGKT~la~~la~~l~~~ 90 (693)
..++|+|+||+||||+|+++++.+...
T Consensus 7 ~~I~l~G~~GsGKTTia~~La~~L~~~ 33 (183)
T d1m8pa3 7 FTIFLTGYMNSGKDAIARALQVTLNQQ 33 (183)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHHHHHH
T ss_pred EEEEEECCCCCCHHHHHHHHHHHHHHC
T ss_conf 699988999999999999999998650
No 121
>d1zp6a1 c.37.1.25 (A:6-181) Hypothetical protein Atu3015 {Agrobacterium tumefaciens [TaxId: 358]}
Probab=96.80 E-value=0.00035 Score=42.32 Aligned_cols=35 Identities=29% Similarity=0.460 Sum_probs=28.9
Q ss_pred EEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCC
Q ss_conf 89995158892799999999996399754055335432
Q 005511 408 SFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEF 445 (693)
Q Consensus 408 ~ill~Gp~GtGKt~lA~~la~~l~~~~~~~~~~~~~~~ 445 (693)
.++|.||||+|||++|+.|++.+ +.+++.++...+
T Consensus 6 iI~l~G~~GsGKSTia~~La~~l---g~~~~~~~~d~~ 40 (176)
T d1zp6a1 6 ILLLSGHPGSGKSTIAEALANLP---GVPKVHFHSDDL 40 (176)
T ss_dssp EEEEEECTTSCHHHHHHHHHTCS---SSCEEEECTTHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHH---CCCEEEECHHHH
T ss_conf 99998899998899999999995---999799068999
No 122
>d1ukza_ c.37.1.1 (A:) Uridylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=96.77 E-value=0.00048 Score=41.37 Aligned_cols=34 Identities=21% Similarity=0.466 Sum_probs=20.2
Q ss_pred EEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCC
Q ss_conf 899951588927999999999963997540553354322
Q 005511 408 SFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFM 446 (693)
Q Consensus 408 ~ill~Gp~GtGKt~lA~~la~~l~~~~~~~~~~~~~~~~ 446 (693)
.++|.||||+|||++|+.|++.+ .+..++++++.
T Consensus 10 iI~i~GppGSGKsT~a~~La~~~-----g~~~is~gdl~ 43 (196)
T d1ukza_ 10 VIFVLGGPGAGKGTQCEKLVKDY-----SFVHLSAGDLL 43 (196)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHS-----SCEEEEHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHH-----CCEEEEHHHHH
T ss_conf 89998999999899999999985-----99088535899
No 123
>d1qhxa_ c.37.1.3 (A:) Chloramphenicol phosphotransferase {Streptomyces venezuelae [TaxId: 54571]}
Probab=96.72 E-value=0.0008 Score=39.84 Aligned_cols=33 Identities=18% Similarity=0.238 Sum_probs=26.7
Q ss_pred CCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEE
Q ss_conf 9980788899971999999999997559999988996699986
Q 005511 63 KNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLD 105 (693)
Q Consensus 63 ~~~ilL~GppGtGKT~la~~la~~l~~~~~~~~~~~~~~~~~~ 105 (693)
..-++|.||||+||||+|+++++.+ +.+++.++
T Consensus 3 ~kiI~l~G~~GsGKsTva~~L~~~l----------~~~~~~~~ 35 (178)
T d1qhxa_ 3 TRMIILNGGSSAGKSGIVRCLQSVL----------PEPWLAFG 35 (178)
T ss_dssp CCEEEEECCTTSSHHHHHHHHHHHS----------SSCEEEEE
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHC----------CCCEEEEE
T ss_conf 8599998999999899999999972----------89969961
No 124
>d1u94a1 c.37.1.11 (A:6-268) RecA protein, ATPase-domain {Escherichia coli [TaxId: 562]}
Probab=96.72 E-value=0.0058 Score=33.89 Aligned_cols=36 Identities=19% Similarity=0.191 Sum_probs=18.1
Q ss_pred EEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEECCC
Q ss_conf 899951588927999999999963997540553354
Q 005511 408 SFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMS 443 (693)
Q Consensus 408 ~ill~Gp~GtGKt~lA~~la~~l~~~~~~~~~~~~~ 443 (693)
...|+||||+|||+++..++...-..+...+++|.-
T Consensus 56 itei~G~~gsGKTtl~l~~~~~~q~~g~~~vyidtE 91 (263)
T d1u94a1 56 IVEIYGPESSGKTTLTLQVIAAAQREGKTCAFIDAE 91 (263)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESS
T ss_pred EEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCC
T ss_conf 899805777478999999999987089879998654
No 125
>d1yj5a2 c.37.1.1 (A:351-522) 5' polynucleotide kinase-3' phosphatase, C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=96.71 E-value=0.0012 Score=38.66 Aligned_cols=21 Identities=24% Similarity=0.306 Sum_probs=11.5
Q ss_pred EEEECCCCCCHHHHHHHHHHH
Q ss_conf 999515889279999999999
Q 005511 409 FIFSGPTGVGKSELAKALAAY 429 (693)
Q Consensus 409 ill~Gp~GtGKt~lA~~la~~ 429 (693)
+++.|+||+|||++|+.++..
T Consensus 17 iil~G~pGsGKST~a~~l~~~ 37 (172)
T d1yj5a2 17 VVAVGFPGAGKSTFIQEHLVS 37 (172)
T ss_dssp EEEECCTTSSHHHHHHHHTGG
T ss_pred EEEECCCCCCHHHHHHHHHHH
T ss_conf 999899999899999999976
No 126
>d2cdna1 c.37.1.1 (A:1-181) Adenylate kinase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=96.70 E-value=0.00075 Score=40.01 Aligned_cols=23 Identities=39% Similarity=0.647 Sum_probs=14.7
Q ss_pred CEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 80788899971999999999997
Q 005511 65 NPCLIGEPGVGKTAIAEGLAQRI 87 (693)
Q Consensus 65 ~ilL~GppGtGKT~la~~la~~l 87 (693)
+++|.||||+||||+++.+++.+
T Consensus 2 ~I~i~G~pGsGKsT~a~~La~~~ 24 (181)
T d2cdna1 2 RVLLLGPPGAGKGTQAVKLAEKL 24 (181)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHH
T ss_conf 89998899999799999999998
No 127
>d1zina1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus stearothermophilus [TaxId: 1422]}
Probab=96.70 E-value=0.00075 Score=40.01 Aligned_cols=22 Identities=36% Similarity=0.546 Sum_probs=15.4
Q ss_pred EEEECCCCCHHHHHHHHHHHHH
Q ss_conf 0788899971999999999997
Q 005511 66 PCLIGEPGVGKTAIAEGLAQRI 87 (693)
Q Consensus 66 ilL~GppGtGKT~la~~la~~l 87 (693)
+++.||||+||||+|+.+|+.+
T Consensus 3 I~i~G~pGSGKsT~a~~La~~~ 24 (182)
T d1zina1 3 LVLMGLPGAGKGTQAEKIVAAY 24 (182)
T ss_dssp EEEECSTTSSHHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHH
T ss_conf 9998899999899999999987
No 128
>d2ak3a1 c.37.1.1 (A:0-124,A:162-225) Adenylate kinase {Cow (Bos taurus), mitochondrial izozyme-3 [TaxId: 9913]}
Probab=96.69 E-value=0.00098 Score=39.22 Aligned_cols=33 Identities=15% Similarity=0.403 Sum_probs=17.0
Q ss_pred EEEECCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCC
Q ss_conf 99951588927999999999963997540553354322
Q 005511 409 FIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFM 446 (693)
Q Consensus 409 ill~Gp~GtGKt~lA~~la~~l~~~~~~~~~~~~~~~~ 446 (693)
+++.||||+|||++|+.||+.+ .+..++++++.
T Consensus 9 IiliG~PGSGKtT~a~~La~~~-----g~~~is~gdll 41 (189)
T d2ak3a1 9 AAIMGAPGSGKGTVSSRITKHF-----ELKHLSSGDLL 41 (189)
T ss_dssp EEEECCTTSSHHHHHHHHHHHB-----CCEEEEHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHH-----CCEEECHHHHH
T ss_conf 9998899998799999999997-----98687189999
No 129
>d2ak3a1 c.37.1.1 (A:0-124,A:162-225) Adenylate kinase {Cow (Bos taurus), mitochondrial izozyme-3 [TaxId: 9913]}
Probab=96.69 E-value=0.00084 Score=39.69 Aligned_cols=27 Identities=19% Similarity=0.489 Sum_probs=23.8
Q ss_pred CCCCCEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 999980788899971999999999997
Q 005511 61 RTKNNPCLIGEPGVGKTAIAEGLAQRI 87 (693)
Q Consensus 61 ~~~~~ilL~GppGtGKT~la~~la~~l 87 (693)
.+.-.++|.||||+||||+++.+|+.+
T Consensus 4 ~r~mrIiliG~PGSGKtT~a~~La~~~ 30 (189)
T d2ak3a1 4 ARLLRAAIMGAPGSGKGTVSSRITKHF 30 (189)
T ss_dssp SCCCEEEEECCTTSSHHHHHHHHHHHB
T ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHH
T ss_conf 762169998899998799999999997
No 130
>d1x6va3 c.37.1.4 (A:34-228) Adenosine-5'phosphosulfate kinase (APS kinase) {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.68 E-value=0.00043 Score=41.65 Aligned_cols=26 Identities=27% Similarity=0.425 Sum_probs=22.6
Q ss_pred CEEEECCCCCHHHHHHHHHHHHHHCC
Q ss_conf 80788899971999999999997559
Q 005511 65 NPCLIGEPGVGKTAIAEGLAQRIASG 90 (693)
Q Consensus 65 ~ilL~GppGtGKT~la~~la~~l~~~ 90 (693)
-++|+|+||+||||+|+.+++.+...
T Consensus 21 vI~L~G~pGSGKTTiAk~La~~l~~~ 46 (195)
T d1x6va3 21 TVWLTGLSGAGKTTVSMALEEYLVCH 46 (195)
T ss_dssp EEEEESSCHHHHHHHHHHHHHHHHHT
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHC
T ss_conf 99988999999999999999999744
No 131
>d1tf7a1 c.37.1.11 (A:14-255) Circadian clock protein KaiC {Synechococcus sp. strain PCC 7942 (Anacystis nidulans R2) [TaxId: 1140]}
Probab=96.68 E-value=0.0049 Score=34.39 Aligned_cols=25 Identities=20% Similarity=0.259 Sum_probs=16.0
Q ss_pred CCCCCEEEECCCCCHHHHHHHHHHH
Q ss_conf 9999807888999719999999999
Q 005511 61 RTKNNPCLIGEPGVGKTAIAEGLAQ 85 (693)
Q Consensus 61 ~~~~~ilL~GppGtGKT~la~~la~ 85 (693)
++..-++++|+||+|||+++..++.
T Consensus 24 ~~G~~~~I~G~~G~GKT~la~~~~~ 48 (242)
T d1tf7a1 24 PIGRSTLVSGTSGTGKTLFSIQFLY 48 (242)
T ss_dssp ETTSEEEEEESTTSSHHHHHHHHHH
T ss_pred CCCEEEEEEECCCCCHHHHHHHHHH
T ss_conf 6983999994799999999999999
No 132
>d1teva_ c.37.1.1 (A:) UMP/CMP kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.67 E-value=0.00061 Score=40.62 Aligned_cols=22 Identities=23% Similarity=0.418 Sum_probs=11.2
Q ss_pred EEEECCCCCCHHHHHHHHHHHH
Q ss_conf 9995158892799999999996
Q 005511 409 FIFSGPTGVGKSELAKALAAYY 430 (693)
Q Consensus 409 ill~Gp~GtGKt~lA~~la~~l 430 (693)
+++.||||+|||+.|+.||+.+
T Consensus 4 I~i~GppGSGKsT~a~~La~~~ 25 (194)
T d1teva_ 4 VFVLGGPGAGKGTQCARIVEKY 25 (194)
T ss_dssp EEEECCTTSSHHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHH
T ss_conf 9997999999899999999986
No 133
>d1ak2a1 c.37.1.1 (A:14-146,A:177-233) Adenylate kinase {Cow (Bos taurus), mitochondrial izozyme-2 [TaxId: 9913]}
Probab=96.66 E-value=0.00071 Score=40.19 Aligned_cols=33 Identities=27% Similarity=0.541 Sum_probs=26.8
Q ss_pred EEEECCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCC
Q ss_conf 99951588927999999999963997540553354322
Q 005511 409 FIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFM 446 (693)
Q Consensus 409 ill~Gp~GtGKt~lA~~la~~l~~~~~~~~~~~~~~~~ 446 (693)
++|.||||+|||++|+.||+.+ .+..++++++.
T Consensus 6 iil~G~pGSGKsT~a~~La~~~-----g~~~i~~gdll 38 (190)
T d1ak2a1 6 AVLLGPPGAGKGTQAPKLAKNF-----CVCHLATGDML 38 (190)
T ss_dssp EEEECCTTSSHHHHHHHHHHHH-----TCEEEEHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHH-----CCEEEEHHHHH
T ss_conf 9998999998899999999986-----98577577889
No 134
>d3adka_ c.37.1.1 (A:) Adenylate kinase {Pig (Sus scrofa) [TaxId: 9823]}
Probab=96.63 E-value=0.00069 Score=40.25 Aligned_cols=33 Identities=18% Similarity=0.426 Sum_probs=16.4
Q ss_pred EEEECCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCC
Q ss_conf 99951588927999999999963997540553354322
Q 005511 409 FIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFM 446 (693)
Q Consensus 409 ill~Gp~GtGKt~lA~~la~~l~~~~~~~~~~~~~~~~ 446 (693)
++|.||||+||+++|+.|++.+ .+..++++++.
T Consensus 11 I~l~G~pGSGKsT~a~~La~~~-----g~~~is~g~ll 43 (194)
T d3adka_ 11 IFVVGGPGSGKGTQCEKIVQKY-----GYTHLSTGDLL 43 (194)
T ss_dssp EEEEECTTSSHHHHHHHHHHHT-----CCEEEEHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHH-----CCEEEECCHHH
T ss_conf 9998999998799999999986-----98468334789
No 135
>d2p6ra3 c.37.1.19 (A:1-202) Hel308 helicase {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=96.63 E-value=0.0099 Score=32.30 Aligned_cols=18 Identities=33% Similarity=0.582 Sum_probs=12.8
Q ss_pred EEEEECCCCCCHHHHHHH
Q ss_conf 899951588927999999
Q 005511 408 SFIFSGPTGVGKSELAKA 425 (693)
Q Consensus 408 ~ill~Gp~GtGKt~lA~~ 425 (693)
++++..|+|+|||++|..
T Consensus 42 ~~il~apTGsGKT~~a~l 59 (202)
T d2p6ra3 42 NLLLAMPTAAGKTLLAEM 59 (202)
T ss_dssp CEEEECSSHHHHHHHHHH
T ss_pred CEEEECCCCCCHHHHHHH
T ss_conf 989986899851178999
No 136
>d2pmka1 c.37.1.12 (A:467-707) Haemolysin B ATP-binding protein {Escherichia coli [TaxId: 562]}
Probab=96.61 E-value=0.0072 Score=33.23 Aligned_cols=27 Identities=15% Similarity=0.334 Sum_probs=18.1
Q ss_pred CCCCCEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 999980788899971999999999997
Q 005511 61 RTKNNPCLIGEPGVGKTAIAEGLAQRI 87 (693)
Q Consensus 61 ~~~~~ilL~GppGtGKT~la~~la~~l 87 (693)
.+...+.+.||+|+||||+++.++..+
T Consensus 27 ~~Ge~vaIvG~sGsGKSTLl~ll~gl~ 53 (241)
T d2pmka1 27 KQGEVIGIVGRSGSGKSTLTKLIQRFY 53 (241)
T ss_dssp ETTCEEEEECSTTSSHHHHHHHHTTSS
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHHCC
T ss_conf 499999999999998999999997357
No 137
>d1y63a_ c.37.1.1 (A:) Probable kinase LmjF30.1890 {Leishmania major [TaxId: 5664]}
Probab=96.60 E-value=0.00084 Score=39.67 Aligned_cols=23 Identities=30% Similarity=0.619 Sum_probs=21.7
Q ss_pred EEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 89995158892799999999996
Q 005511 408 SFIFSGPTGVGKSELAKALAAYY 430 (693)
Q Consensus 408 ~ill~Gp~GtGKt~lA~~la~~l 430 (693)
++++.||||+|||++|+.|++.+
T Consensus 7 ~I~i~G~~GsGKTT~~~~La~~l 29 (174)
T d1y63a_ 7 NILITGTPGTGKTSMAEMIAAEL 29 (174)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHS
T ss_pred EEEEEECCCCCHHHHHHHHHHHH
T ss_conf 89998289998899999999985
No 138
>d1ukza_ c.37.1.1 (A:) Uridylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=96.59 E-value=0.00096 Score=39.27 Aligned_cols=27 Identities=26% Similarity=0.409 Sum_probs=22.9
Q ss_pred CCCCCEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 999980788899971999999999997
Q 005511 61 RTKNNPCLIGEPGVGKTAIAEGLAQRI 87 (693)
Q Consensus 61 ~~~~~ilL~GppGtGKT~la~~la~~l 87 (693)
+..+-++|.||||+||||+|+.+++.+
T Consensus 6 ~~~~iI~i~GppGSGKsT~a~~La~~~ 32 (196)
T d1ukza_ 6 DQVSVIFVLGGPGAGKGTQCEKLVKDY 32 (196)
T ss_dssp TTCEEEEEECSTTSSHHHHHHHHHHHS
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHH
T ss_conf 997289998999999899999999985
No 139
>d1v43a3 c.37.1.12 (A:7-245) Hypothetical protein PH0022, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}
Probab=96.58 E-value=0.0074 Score=33.18 Aligned_cols=27 Identities=26% Similarity=0.302 Sum_probs=20.6
Q ss_pred CCCCCEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 999980788899971999999999997
Q 005511 61 RTKNNPCLIGEPGVGKTAIAEGLAQRI 87 (693)
Q Consensus 61 ~~~~~ilL~GppGtGKT~la~~la~~l 87 (693)
.+..-+-|.||+|+||||+.+.++..+
T Consensus 30 ~~Ge~~~liGpsGaGKSTLl~~i~Gl~ 56 (239)
T d1v43a3 30 KDGEFLVLLGPSGCGKTTTLRMIAGLE 56 (239)
T ss_dssp CTTCEEEEECCTTSSHHHHHHHHHTSS
T ss_pred CCCCEEEEECCCCCHHHHHHHHHHCCC
T ss_conf 799899999999982999999997589
No 140
>d1yksa1 c.37.1.14 (A:185-324) YFV helicase domain {Yellow fever virus [TaxId: 11089]}
Probab=96.57 E-value=0.0013 Score=38.26 Aligned_cols=34 Identities=15% Similarity=0.086 Sum_probs=17.3
Q ss_pred EEEEECCCCCCHHHHHH-HHHHHHCCCCCCEEEEC
Q ss_conf 89995158892799999-99999639975405533
Q 005511 408 SFIFSGPTGVGKSELAK-ALAAYYFGSEEAMIRLD 441 (693)
Q Consensus 408 ~ill~Gp~GtGKt~lA~-~la~~l~~~~~~~~~~~ 441 (693)
+.++.+|||+|||..+- .+.......+...+.+.
T Consensus 9 ~~il~~~tGsGKT~~~~~~~~~~~~~~~~~vli~~ 43 (140)
T d1yksa1 9 TTVLDFHPGAGKTRRFLPQILAECARRRLRTLVLA 43 (140)
T ss_dssp EEEECCCTTSSTTTTHHHHHHHHHHHTTCCEEEEE
T ss_pred CEEEECCCCCCHHHHHHHHHHHHHHHCCCEEEEEE
T ss_conf 67998179988559999999997531385156531
No 141
>d1zcba2 c.37.1.8 (A:47-75,A:202-372) Transducin (alpha subunit) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=96.56 E-value=0.008 Score=32.93 Aligned_cols=147 Identities=12% Similarity=0.120 Sum_probs=60.3
Q ss_pred EEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCH
Q ss_conf 07888999719999999999975599999889966999865210139744661899999999999708984999916003
Q 005511 66 PCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHT 145 (693)
Q Consensus 66 ilL~GppGtGKT~la~~la~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~iL~iDEid~ 145 (693)
+++.|.+|+|||++++.+ .......|+. |.....++...........+..+................+++.|-.+.
T Consensus 5 ivllG~~~vGKTsll~r~--~f~~~~~pTi--G~~~~~~~~~~~~~~~~D~~gq~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (200)
T d1zcba2 5 ILLLGAGESGKSTFLKQM--RIIHGQDPTK--GIHEYDFEIKNVPFKMVDVGGQRSERKRWFECFDSVTSILFLVSSSEF 80 (200)
T ss_dssp EEEECSTTSSHHHHHHHH--HHHHSCCCCS--SEEEEEEEETTEEEEEEEECC-------CTTSCTTCCEEEEEEETTCT
T ss_pred EEEECCCCCCHHHHHHHH--HCCCCCCCEE--EEEEEEEEEEEEEEEEECCCCEEEECCCCCCCCCCCCEEEEEEECCCC
T ss_conf 999989999989999988--4689888724--149999960144566513531144114233201000036799984770
Q ss_pred HHHCCCC---CCHHHHHHHHHHHHC---CCCCEEEEEECHHHHHHHHHCCHHHHCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 3108999---884769998833110---7981799974358898542039888546783115899999999999999
Q 005511 146 LIGAGAA---EGAIDAANILKPSLA---RGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGL 216 (693)
Q Consensus 146 l~~~~~~---~~~~~~~~~L~~~l~---~~~i~iI~~t~~~~~~~~~~l~~~l~~Rf~~i~~~~p~~~e~~~il~~~ 216 (693)
....... ....+....+..+++ .....++...|..+..........+...|....-.+.+.+...+.+...
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~piilv~NK~Dl~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~ 157 (200)
T d1zcba2 81 DQVLMEDRQTNRLTESLNIFETIVNNRVFSNVSIILFLNKTDLLEEKVQVVSIKDYFLEFEGDPHCLRDVQKFLVEC 157 (200)
T ss_dssp TCEETTEEEEEHHHHHHHHHHHHHTCGGGTTSEEEEEEECHHHHHHHTTTCCGGGTCTTCCSCTTCHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHHHHCHHHCCCEEEEEECCCHHHHHHCCCCHHHHHCCCCCCCCCHHHHHHHHHHHH
T ss_conf 10231010011446788999999617654696399982311456650245078774721368962699999999999
No 142
>d1akya1 c.37.1.1 (A:3-130,A:169-220) Adenylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=96.56 E-value=0.0014 Score=38.15 Aligned_cols=22 Identities=32% Similarity=0.652 Sum_probs=10.9
Q ss_pred EEEECCCCCCHHHHHHHHHHHH
Q ss_conf 9995158892799999999996
Q 005511 409 FIFSGPTGVGKSELAKALAAYY 430 (693)
Q Consensus 409 ill~Gp~GtGKt~lA~~la~~l 430 (693)
++|.||||+|||++|+.||+.+
T Consensus 5 Ivl~G~pGSGKtT~a~~La~~~ 26 (180)
T d1akya1 5 MVLIGPPGAGKGTQAPNLQERF 26 (180)
T ss_dssp EEEECCTTSSHHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHH
T ss_conf 9998999999899999999996
No 143
>d1g6oa_ c.37.1.11 (A:) Hexameric traffic ATPase, HP0525 {Helicobacter pylori [TaxId: 210]}
Probab=96.54 E-value=0.0082 Score=32.87 Aligned_cols=111 Identities=13% Similarity=0.155 Sum_probs=57.4
Q ss_pred CHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEC-CCCCCC--C---CCCCHHH
Q ss_conf 889999999997039999807888999719999999999975599999889966999865-210139--7---4466189
Q 005511 47 RQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDM-GLLVAG--T---KYRGEFE 120 (693)
Q Consensus 47 ~~~~~~~l~~~l~~~~~~~ilL~GppGtGKT~la~~la~~l~~~~~~~~~~~~~~~~~~~-~~~~~~--~---~~~g~~~ 120 (693)
.++....+..++. ...|+++.||+|+||||+.++++..++. +.+++.+.- .++.-. . .......
T Consensus 152 ~~~~~~~l~~~v~--~~~nili~G~tgSGKTT~l~al~~~i~~--------~~rivtiEd~~El~l~~~~~~~~~~~~~~ 221 (323)
T d1g6oa_ 152 KEQAISAIKDGIA--IGKNVIVCGGTGSGKTTYIKSIMEFIPK--------EERIISIEDTEEIVFKHHKNYTQLFFGGN 221 (323)
T ss_dssp HHHHHHHHHHHHH--HTCCEEEEESTTSSHHHHHHHHGGGSCT--------TCCEEEEESSCCCCCSSCSSEEEEECBTT
T ss_pred HHHHHHHHHHHHH--HCCCEEEEEECCCCCHHHHHHHHHHCCC--------CCCEEECCCHHHHHCCCCCCCCEECCCCC
T ss_conf 9999999999998--3788899940356625789998653014--------56233113226551111245410014654
Q ss_pred HHHHHHHHHHHHCCCEEEEEECCCHHHHCCCCCCHHHHHHHHHHHHCCCCCEEEEEEC
Q ss_conf 9999999999708984999916003310899988476999883311079817999743
Q 005511 121 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATT 178 (693)
Q Consensus 121 ~~~~~~~~~~~~~~~~iL~iDEid~l~~~~~~~~~~~~~~~L~~~l~~~~i~iI~~t~ 178 (693)
-.+..++..+....|-.+++.|+-. .+...+ .+.+..|+.-++.+..
T Consensus 222 ~~~~~ll~~~lR~~pd~iivgEiR~----------~ea~~~-l~a~~tGh~g~~tT~H 268 (323)
T d1g6oa_ 222 ITSADCLKSCLRMRPDRIILGELRS----------SEAYDF-YNVLCSGHKGTLTTLH 268 (323)
T ss_dssp BCHHHHHHHHTTSCCSEEEESCCCS----------THHHHH-HHHHHTTCSCEEEEEC
T ss_pred HHHHHHHHHHHCCCCCCCCCCCCCC----------HHHHHH-HHHHHHCCCCEEEEEC
T ss_conf 2499999997434998545786674----------659999-9999816985799878
No 144
>d1s3ga1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus globisporus [TaxId: 1459]}
Probab=96.53 E-value=0.0013 Score=38.40 Aligned_cols=22 Identities=32% Similarity=0.608 Sum_probs=13.7
Q ss_pred EEEECCCCCHHHHHHHHHHHHH
Q ss_conf 0788899971999999999997
Q 005511 66 PCLIGEPGVGKTAIAEGLAQRI 87 (693)
Q Consensus 66 ilL~GppGtGKT~la~~la~~l 87 (693)
++|.||||+||||+|+.+|+.+
T Consensus 3 I~i~G~pGSGKsT~a~~La~~~ 24 (182)
T d1s3ga1 3 IVLMGLPGAGKGTQADRIVEKY 24 (182)
T ss_dssp EEEECSTTSSHHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHH
T ss_conf 9998899998799999999987
No 145
>d1zina1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus stearothermophilus [TaxId: 1422]}
Probab=96.52 E-value=0.0011 Score=38.75 Aligned_cols=34 Identities=21% Similarity=0.481 Sum_probs=26.8
Q ss_pred EEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCC
Q ss_conf 899951588927999999999963997540553354322
Q 005511 408 SFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFM 446 (693)
Q Consensus 408 ~ill~Gp~GtGKt~lA~~la~~l~~~~~~~~~~~~~~~~ 446 (693)
.+++.||||+|||++|+.||+.+ + +..++++++.
T Consensus 2 ~I~i~G~pGSGKsT~a~~La~~~---~--~~~i~~~~ll 35 (182)
T d1zina1 2 NLVLMGLPGAGKGTQAEKIVAAY---G--IPHISTGDMF 35 (182)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHH---C--CCEEEHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHH---C--CCEECHHHHH
T ss_conf 89998899999899999999987---9--9266153899
No 146
>d2bdta1 c.37.1.25 (A:1-176) Hypothetical protein BH3686 {Bacillus halodurans [TaxId: 86665]}
Probab=96.52 E-value=0.00077 Score=39.93 Aligned_cols=24 Identities=29% Similarity=0.483 Sum_probs=21.7
Q ss_pred CCEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 980788899971999999999997
Q 005511 64 NNPCLIGEPGVGKTAIAEGLAQRI 87 (693)
Q Consensus 64 ~~ilL~GppGtGKT~la~~la~~l 87 (693)
+-+++.||||+||||+|+.+++.+
T Consensus 3 klI~i~G~~GsGKTTva~~L~~~~ 26 (176)
T d2bdta1 3 KLYIITGPAGVGKSTTCKRLAAQL 26 (176)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHHS
T ss_pred EEEEEECCCCCCHHHHHHHHHHHC
T ss_conf 089998999999899999999980
No 147
>d2cdna1 c.37.1.1 (A:1-181) Adenylate kinase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=96.51 E-value=0.0012 Score=38.70 Aligned_cols=34 Identities=26% Similarity=0.468 Sum_probs=26.5
Q ss_pred EEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCC
Q ss_conf 899951588927999999999963997540553354322
Q 005511 408 SFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFM 446 (693)
Q Consensus 408 ~ill~Gp~GtGKt~lA~~la~~l~~~~~~~~~~~~~~~~ 446 (693)
.++|.||||+|||++|+.|++.+ + +..++.+++.
T Consensus 2 ~I~i~G~pGsGKsT~a~~La~~~---g--~~~i~~~~l~ 35 (181)
T d2cdna1 2 RVLLLGPPGAGKGTQAVKLAEKL---G--IPQISTGELF 35 (181)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHH---T--CCEEEHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHH---C--CCEECHHHHH
T ss_conf 89998899999799999999998---9--9167257889
No 148
>d1jj7a_ c.37.1.12 (A:) Peptide transporter Tap1, C-terminal ABC domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.51 E-value=0.011 Score=32.09 Aligned_cols=27 Identities=30% Similarity=0.439 Sum_probs=18.4
Q ss_pred CCCCCEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 999980788899971999999999997
Q 005511 61 RTKNNPCLIGEPGVGKTAIAEGLAQRI 87 (693)
Q Consensus 61 ~~~~~ilL~GppGtGKT~la~~la~~l 87 (693)
.+...+.+.||+|+||||+++.+...+
T Consensus 38 ~~Ge~vaivG~sGsGKSTLl~li~gl~ 64 (251)
T d1jj7a_ 38 RPGEVTALVGPNGSGKSTVAALLQNLY 64 (251)
T ss_dssp CTTCEEEEECSTTSSHHHHHHHHTTSS
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHCCC
T ss_conf 499899999999984999999986143
No 149
>d3adka_ c.37.1.1 (A:) Adenylate kinase {Pig (Sus scrofa) [TaxId: 9823]}
Probab=96.50 E-value=0.0013 Score=38.42 Aligned_cols=26 Identities=27% Similarity=0.472 Sum_probs=23.1
Q ss_pred CCCCEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 99980788899971999999999997
Q 005511 62 TKNNPCLIGEPGVGKTAIAEGLAQRI 87 (693)
Q Consensus 62 ~~~~ilL~GppGtGKT~la~~la~~l 87 (693)
.+.-++|.||||+||||+|+.+++.+
T Consensus 7 ~~~iI~l~G~pGSGKsT~a~~La~~~ 32 (194)
T d3adka_ 7 KSKIIFVVGGPGSGKGTQCEKIVQKY 32 (194)
T ss_dssp TSCEEEEEECTTSSHHHHHHHHHHHT
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHH
T ss_conf 78289998999998799999999986
No 150
>d3b60a1 c.37.1.12 (A:329-581) Multidrug resistance ABC transporter MsbA, C-terminal domain {Salmonella typhimurium [TaxId: 90371]}
Probab=96.50 E-value=0.007 Score=33.35 Aligned_cols=27 Identities=26% Similarity=0.418 Sum_probs=19.4
Q ss_pred CCCCCEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 999980788899971999999999997
Q 005511 61 RTKNNPCLIGEPGVGKTAIAEGLAQRI 87 (693)
Q Consensus 61 ~~~~~ilL~GppGtGKT~la~~la~~l 87 (693)
.+...+.+.||+|+||||+++.++..+
T Consensus 39 ~~Ge~iaivG~sGsGKSTLl~ll~gl~ 65 (253)
T d3b60a1 39 PAGKTVALVGRSGSGKSTIASLITRFY 65 (253)
T ss_dssp CTTCEEEEEECTTSSHHHHHHHHTTTT
T ss_pred CCCCEEEEECCCCCHHHHHHHHHHCCC
T ss_conf 599999999999985999999986216
No 151
>d1rz3a_ c.37.1.6 (A:) Hypothetical protein rbstp0775 {Bacillus stearothermophilus [TaxId: 1422]}
Probab=96.46 E-value=0.0036 Score=35.29 Aligned_cols=39 Identities=18% Similarity=0.195 Sum_probs=24.6
Q ss_pred CCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEECC
Q ss_conf 9984389995158892799999999996399754055335
Q 005511 403 NRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDM 442 (693)
Q Consensus 403 ~~~~~~ill~Gp~GtGKt~lA~~la~~l~~~~~~~~~~~~ 442 (693)
.+|. .+.+.||+|+|||++|+.|++.+...+.....++.
T Consensus 20 ~~~~-iIgI~G~~GSGKSTla~~L~~~l~~~~~~~~~~~~ 58 (198)
T d1rz3a_ 20 AGRL-VLGIDGLSRSGKTTLANQLSQTLREQGISVCVFHM 58 (198)
T ss_dssp SSSE-EEEEEECTTSSHHHHHHHHHHHHHHTTCCEEEEEG
T ss_pred CCCE-EEEEECCCCCCHHHHHHHHHHHHCCCCCCCEECCC
T ss_conf 9988-99978988789999999999983634665200122
No 152
>d1ckea_ c.37.1.1 (A:) CMP kinase {Escherichia coli [TaxId: 562]}
Probab=96.45 E-value=0.002 Score=37.03 Aligned_cols=23 Identities=39% Similarity=0.674 Sum_probs=12.6
Q ss_pred EEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 89995158892799999999996
Q 005511 408 SFIFSGPTGVGKSELAKALAAYY 430 (693)
Q Consensus 408 ~ill~Gp~GtGKt~lA~~la~~l 430 (693)
.+.+.||||+||++.|+.||+.+
T Consensus 5 iI~I~GppGSGKgT~ak~La~~~ 27 (225)
T d1ckea_ 5 VITIDGPSGAGKGTLCKAMAEAL 27 (225)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHH
T ss_conf 89977999889899999999996
No 153
>d1mo6a1 c.37.1.11 (A:1-269) RecA protein, ATPase-domain {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=96.42 E-value=0.014 Score=31.27 Aligned_cols=37 Identities=19% Similarity=0.185 Sum_probs=23.3
Q ss_pred EEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEECCCC
Q ss_conf 8999515889279999999999639975405533543
Q 005511 408 SFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSE 444 (693)
Q Consensus 408 ~ill~Gp~GtGKt~lA~~la~~l~~~~~~~~~~~~~~ 444 (693)
...|+||+|+|||++|..++...-..+...+++|.-.
T Consensus 62 i~e~~G~~~~GKT~l~l~~~~~~q~~g~~~vyIDtE~ 98 (269)
T d1mo6a1 62 VIEIYGPESSGKTTVALHAVANAQAAGGVAAFIDAEH 98 (269)
T ss_dssp EEEEECSSSSSHHHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred EEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEEECCC
T ss_conf 6999648874889999999998754898899998976
No 154
>d1teva_ c.37.1.1 (A:) UMP/CMP kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.41 E-value=0.0016 Score=37.81 Aligned_cols=24 Identities=21% Similarity=0.423 Sum_probs=21.8
Q ss_pred CCEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 980788899971999999999997
Q 005511 64 NNPCLIGEPGVGKTAIAEGLAQRI 87 (693)
Q Consensus 64 ~~ilL~GppGtGKT~la~~la~~l 87 (693)
.-+++.||||+||||.|+.+|+.+
T Consensus 2 ~iI~i~GppGSGKsT~a~~La~~~ 25 (194)
T d1teva_ 2 LVVFVLGGPGAGKGTQCARIVEKY 25 (194)
T ss_dssp EEEEEECCTTSSHHHHHHHHHHHH
T ss_pred CEEEEECCCCCCHHHHHHHHHHHH
T ss_conf 399997999999899999999986
No 155
>d1e4va1 c.37.1.1 (A:1-121,A:157-214) Adenylate kinase {Escherichia coli [TaxId: 562]}
Probab=96.37 E-value=0.0015 Score=37.86 Aligned_cols=22 Identities=27% Similarity=0.404 Sum_probs=12.2
Q ss_pred EEEECCCCCCHHHHHHHHHHHH
Q ss_conf 9995158892799999999996
Q 005511 409 FIFSGPTGVGKSELAKALAAYY 430 (693)
Q Consensus 409 ill~Gp~GtGKt~lA~~la~~l 430 (693)
++|.||||+|||++|+.|++.+
T Consensus 3 I~i~G~pGSGKsT~~~~La~~~ 24 (179)
T d1e4va1 3 IILLGAPVAGKGTQAQFIMEKY 24 (179)
T ss_dssp EEEEESTTSSHHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHH
T ss_conf 9998799999899999999986
No 156
>d1s3ga1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus globisporus [TaxId: 1459]}
Probab=96.35 E-value=0.0017 Score=37.60 Aligned_cols=34 Identities=18% Similarity=0.423 Sum_probs=26.7
Q ss_pred EEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCC
Q ss_conf 899951588927999999999963997540553354322
Q 005511 408 SFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFM 446 (693)
Q Consensus 408 ~ill~Gp~GtGKt~lA~~la~~l~~~~~~~~~~~~~~~~ 446 (693)
.++|.||||+|||++|+.||+.+ .+..++++++.
T Consensus 2 ~I~i~G~pGSGKsT~a~~La~~~-----g~~~is~gdll 35 (182)
T d1s3ga1 2 NIVLMGLPGAGKGTQADRIVEKY-----GTPHISTGDMF 35 (182)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHH-----CCCEEEHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHH-----CCCEEEHHHHH
T ss_conf 89998899998799999999987-----99366388999
No 157
>d1a1va1 c.37.1.14 (A:190-325) HCV helicase domain {Human hepatitis C virus (HCV), different isolates [TaxId: 11103]}
Probab=96.35 E-value=0.0025 Score=36.37 Aligned_cols=94 Identities=19% Similarity=0.166 Sum_probs=41.9
Q ss_pred EEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEECCCC-CCCH--HHHHHHCCCCCCCCCCCCC---------CHHHHHH
Q ss_conf 38999515889279999999999639975405533543-2210--0011002899987676751---------2266999
Q 005511 407 ASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSE-FMER--HTVSKLIGSPPGYVGYTEG---------GQLTEAV 474 (693)
Q Consensus 407 ~~ill~Gp~GtGKt~lA~~la~~l~~~~~~~~~~~~~~-~~~~--~~~~~l~g~~~~~~g~~~~---------~~l~~~~ 474 (693)
...++.+|+|+|||.++-.+... .+...+.+-... +.+. ......++...+....... .......
T Consensus 9 ~~~ll~apTGsGKT~~~~~~~~~---~~~~vli~~P~~~l~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (136)
T d1a1va1 9 QVAHLHAPTGSGKSTKVPAAYAA---QGYKVLVLNPSVAATLGFGAYMSKAHGVDPNIRTGVRTITTGSPITYSTYGKFL 85 (136)
T ss_dssp EEEEEECCTTSCTTTHHHHHHHT---TTCCEEEEESCHHHHHHHHHHHHHHHSCCCEEECSSCEECCCCSEEEEEHHHHH
T ss_pred CEEEEEECCCCCHHHHHHHHHHH---CCCCEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEEEC
T ss_conf 88999968877999999999998---699399976769999999999999852024643001221134422788641000
Q ss_pred H-----CCCCEEEEECCCCCCCHHHHHHHHHHHH
Q ss_conf 8-----0999899984674229889999999740
Q 005511 475 R-----RRPYTVVLFDEIEKAHPDVFNMMLQILE 503 (693)
Q Consensus 475 ~-----~~~~~vl~iDEid~l~~~~~~~Ll~~le 503 (693)
. -...+++++||++.++......+...++
T Consensus 86 ~~~~~~~~~~~~vIiDE~H~~~~~~~~~~~~~l~ 119 (136)
T d1a1va1 86 ADGGCSGGAYDIIICDECHSTDATSILGIGTVLD 119 (136)
T ss_dssp HTTGGGGCCCSEEEEETTTCCSHHHHHHHHHHHH
T ss_pred CCCCHHHHCCCEEEEECCCCCCHHHHHHHHHHHH
T ss_conf 2353024159999982555358878999999999
No 158
>d1ckea_ c.37.1.1 (A:) CMP kinase {Escherichia coli [TaxId: 562]}
Probab=96.34 E-value=0.0013 Score=38.41 Aligned_cols=24 Identities=21% Similarity=0.410 Sum_probs=21.2
Q ss_pred CCEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 980788899971999999999997
Q 005511 64 NNPCLIGEPGVGKTAIAEGLAQRI 87 (693)
Q Consensus 64 ~~ilL~GppGtGKT~la~~la~~l 87 (693)
+-+.+.||||+||+|+++.+++.+
T Consensus 4 piI~I~GppGSGKgT~ak~La~~~ 27 (225)
T d1ckea_ 4 PVITIDGPSGAGKGTLCKAMAEAL 27 (225)
T ss_dssp CEEEEECCTTSSHHHHHHHHHHHH
T ss_pred CEEEEECCCCCCHHHHHHHHHHHH
T ss_conf 889977999889899999999996
No 159
>d1oxxk2 c.37.1.12 (K:1-242) Glucose transport protein GlcV, N-terminal domain {Archaeon Sulfolobus solfataricus [TaxId: 2287]}
Probab=96.34 E-value=0.0036 Score=35.36 Aligned_cols=27 Identities=22% Similarity=0.265 Sum_probs=20.6
Q ss_pred CCCCCEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 999980788899971999999999997
Q 005511 61 RTKNNPCLIGEPGVGKTAIAEGLAQRI 87 (693)
Q Consensus 61 ~~~~~ilL~GppGtGKT~la~~la~~l 87 (693)
.....+.+.||+|+||||+.+.++...
T Consensus 29 ~~Ge~~~iiG~sGsGKSTll~~i~gl~ 55 (242)
T d1oxxk2 29 ENGERFGILGPSGAGKTTFMRIIAGLD 55 (242)
T ss_dssp CTTCEEEEECSCHHHHHHHHHHHHTSS
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHCCC
T ss_conf 799899999899980999999997586
No 160
>d1np6a_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Escherichia coli [TaxId: 562]}
Probab=96.30 E-value=0.002 Score=37.13 Aligned_cols=34 Identities=21% Similarity=0.181 Sum_probs=24.7
Q ss_pred EEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEE
Q ss_conf 3899951588927999999999963997540553
Q 005511 407 ASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRL 440 (693)
Q Consensus 407 ~~ill~Gp~GtGKt~lA~~la~~l~~~~~~~~~~ 440 (693)
+.+.++|++|+|||++++.|++.+...+.....+
T Consensus 3 Pvi~itG~~GSGKTTL~~~L~~~l~~~g~~v~v~ 36 (170)
T d1np6a_ 3 PLLAFAAWSGTGKTTLLKKLIPALCARGIRPGLI 36 (170)
T ss_dssp CEEEEECCTTSCHHHHHHHHHHHHHHTTCCEEEE
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEE
T ss_conf 8899991899989999999999999779768774
No 161
>d1ly1a_ c.37.1.1 (A:) Polynucleotide kinase, kinase domain {Bacteriophage T4 [TaxId: 10665]}
Probab=96.26 E-value=0.0015 Score=38.04 Aligned_cols=21 Identities=33% Similarity=0.426 Sum_probs=13.4
Q ss_pred EEEECCCCCCHHHHHHHHHHH
Q ss_conf 999515889279999999999
Q 005511 409 FIFSGPTGVGKSELAKALAAY 429 (693)
Q Consensus 409 ill~Gp~GtGKt~lA~~la~~ 429 (693)
+++.||||+|||++|+.|...
T Consensus 5 Iii~G~pGsGKTTla~~L~~~ 25 (152)
T d1ly1a_ 5 ILTIGCPGSGKSTWAREFIAK 25 (152)
T ss_dssp EEEECCTTSSHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHH
T ss_conf 999899999999999999995
No 162
>d1q3ta_ c.37.1.1 (A:) CMP kinase {Streptococcus pneumoniae [TaxId: 1313]}
Probab=96.26 E-value=0.0026 Score=36.31 Aligned_cols=33 Identities=30% Similarity=0.517 Sum_probs=18.0
Q ss_pred EEEECCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCC
Q ss_conf 99951588927999999999963997540553354322
Q 005511 409 FIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFM 446 (693)
Q Consensus 409 ill~Gp~GtGKt~lA~~la~~l~~~~~~~~~~~~~~~~ 446 (693)
+.+.||||+|||++|+.||+.+ .+..++.+++.
T Consensus 6 IaIdGp~GsGKgT~ak~La~~l-----g~~~istGdl~ 38 (223)
T d1q3ta_ 6 IAIDGPASSGKSTVAKIIAKDF-----GFTYLDTGAMY 38 (223)
T ss_dssp EEEECSSCSSHHHHHHHHHHHH-----CCEEEEHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHH-----CCCEECHHHHH
T ss_conf 9978999879899999999996-----99478779999
No 163
>d1g2912 c.37.1.12 (1:1-240) Maltose transport protein MalK, N-terminal domain {Archaeon Thermococcus litoralis [TaxId: 2265]}
Probab=96.26 E-value=0.0036 Score=35.34 Aligned_cols=27 Identities=26% Similarity=0.287 Sum_probs=19.6
Q ss_pred CCCCCEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 999980788899971999999999997
Q 005511 61 RTKNNPCLIGEPGVGKTAIAEGLAQRI 87 (693)
Q Consensus 61 ~~~~~ilL~GppGtGKT~la~~la~~l 87 (693)
.....+-|.||+|+||||+++.++...
T Consensus 27 ~~Ge~~~liG~sGaGKSTll~~i~gl~ 53 (240)
T d1g2912 27 KDGEFMILLGPSGCGKTTTLRMIAGLE 53 (240)
T ss_dssp ETTCEEEEECSTTSSHHHHHHHHHTSS
T ss_pred CCCCEEEEECCCCCHHHHHHHHHHCCC
T ss_conf 699899999999980999999996487
No 164
>d1l2ta_ c.37.1.12 (A:) MJ0796 {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=96.25 E-value=0.016 Score=30.78 Aligned_cols=27 Identities=15% Similarity=0.243 Sum_probs=19.1
Q ss_pred CCCCCEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 999980788899971999999999997
Q 005511 61 RTKNNPCLIGEPGVGKTAIAEGLAQRI 87 (693)
Q Consensus 61 ~~~~~ilL~GppGtGKT~la~~la~~l 87 (693)
.....+-+.||+||||||+.+.++...
T Consensus 29 ~~Ge~~~iiG~sGsGKSTLl~~i~gl~ 55 (230)
T d1l2ta_ 29 KEGEFVSIMGPSGSGKSTMLNIIGCLD 55 (230)
T ss_dssp CTTCEEEEECSTTSSHHHHHHHHTTSS
T ss_pred CCCCEEEEECCCCCCCCHHHHHCCCCC
T ss_conf 499799998899998216557506887
No 165
>d2awna2 c.37.1.12 (A:4-235) Maltose transport protein MalK, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=96.25 E-value=0.011 Score=32.05 Aligned_cols=27 Identities=19% Similarity=0.289 Sum_probs=19.8
Q ss_pred CCCCCEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 999980788899971999999999997
Q 005511 61 RTKNNPCLIGEPGVGKTAIAEGLAQRI 87 (693)
Q Consensus 61 ~~~~~ilL~GppGtGKT~la~~la~~l 87 (693)
.+..-+.|.||+|+||||+.+.++...
T Consensus 24 ~~Gei~~liGpsGsGKSTLl~~i~Gl~ 50 (232)
T d2awna2 24 HEGEFVVFVGPSGCGKSTLLRMIAGLE 50 (232)
T ss_dssp CTTCEEEEECCTTSSHHHHHHHHHTSS
T ss_pred CCCCEEEEECCCCCHHHHHHHHHHCCC
T ss_conf 699899999899982999999996587
No 166
>d1akya1 c.37.1.1 (A:3-130,A:169-220) Adenylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=96.23 E-value=0.0018 Score=37.42 Aligned_cols=23 Identities=43% Similarity=0.684 Sum_probs=21.2
Q ss_pred CEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 80788899971999999999997
Q 005511 65 NPCLIGEPGVGKTAIAEGLAQRI 87 (693)
Q Consensus 65 ~ilL~GppGtGKT~la~~la~~l 87 (693)
.++|.||||+||||+++.+|+.+
T Consensus 4 rIvl~G~pGSGKtT~a~~La~~~ 26 (180)
T d1akya1 4 RMVLIGPPGAGKGTQAPNLQERF 26 (180)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHH
T ss_conf 99998999999899999999996
No 167
>d1e4va1 c.37.1.1 (A:1-121,A:157-214) Adenylate kinase {Escherichia coli [TaxId: 562]}
Probab=96.22 E-value=0.0021 Score=36.90 Aligned_cols=23 Identities=26% Similarity=0.385 Sum_probs=21.5
Q ss_pred CEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 80788899971999999999997
Q 005511 65 NPCLIGEPGVGKTAIAEGLAQRI 87 (693)
Q Consensus 65 ~ilL~GppGtGKT~la~~la~~l 87 (693)
.++|.||||+||||+++.+++.+
T Consensus 2 ~I~i~G~pGSGKsT~~~~La~~~ 24 (179)
T d1e4va1 2 RIILLGAPVAGKGTQAQFIMEKY 24 (179)
T ss_dssp EEEEEESTTSSHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHH
T ss_conf 89998799999899999999986
No 168
>d1khta_ c.37.1.1 (A:) Adenylate kinase {Archaeon Methanococcus voltae [TaxId: 2188]}
Probab=96.22 E-value=0.002 Score=37.10 Aligned_cols=24 Identities=25% Similarity=0.414 Sum_probs=15.3
Q ss_pred EEEECCCCCHHHHHHHHHHHHHHC
Q ss_conf 078889997199999999999755
Q 005511 66 PCLIGEPGVGKTAIAEGLAQRIAS 89 (693)
Q Consensus 66 ilL~GppGtGKT~la~~la~~l~~ 89 (693)
+++.|+||+||||+++.+++.+..
T Consensus 4 I~i~G~~GsGKsT~~~~L~~~l~~ 27 (190)
T d1khta_ 4 VVVTGVPGVGSTTSSQLAMDNLRK 27 (190)
T ss_dssp EEEECCTTSCHHHHHHHHHHHHHT
T ss_pred EEEECCCCCCHHHHHHHHHHHHHH
T ss_conf 999899998989999999999987
No 169
>d1bifa1 c.37.1.7 (A:37-249) 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase, kinase domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=96.21 E-value=0.0022 Score=36.82 Aligned_cols=36 Identities=17% Similarity=0.221 Sum_probs=26.3
Q ss_pred EEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEECCC
Q ss_conf 899951588927999999999963997540553354
Q 005511 408 SFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMS 443 (693)
Q Consensus 408 ~ill~Gp~GtGKt~lA~~la~~l~~~~~~~~~~~~~ 443 (693)
.++++|.||+|||++|+.|++.+...+.+...++..
T Consensus 4 li~l~GlpgsGKSTla~~L~~~l~~~~~~~~~~~~D 39 (213)
T d1bifa1 4 LIVMVGLPARGKTYISKKLTRYLNFIGVPTREFNVG 39 (213)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHHHTTCCEEEEEHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEECCC
T ss_conf 999989999999999999999997469997397453
No 170
>d1r0wa_ c.37.1.12 (A:) Cystic fibrosis transmembrane conductance regulator, CFTR, nucleotide-binding domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=96.20 E-value=0.024 Score=29.63 Aligned_cols=23 Identities=26% Similarity=0.414 Sum_probs=20.2
Q ss_pred EEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 89995158892799999999996
Q 005511 408 SFIFSGPTGVGKSELAKALAAYY 430 (693)
Q Consensus 408 ~ill~Gp~GtGKt~lA~~la~~l 430 (693)
.+.+.||+|+|||++.++|+..+
T Consensus 64 ~vaivG~nGsGKSTLl~~i~Gl~ 86 (281)
T d1r0wa_ 64 MLAITGSTGSGKTSLLMLILGEL 86 (281)
T ss_dssp EEEEEESTTSSHHHHHHHHHTSS
T ss_pred EEEEECCCCCHHHHHHHHHHCCC
T ss_conf 99999899982999999995797
No 171
>d1jj7a_ c.37.1.12 (A:) Peptide transporter Tap1, C-terminal ABC domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.18 E-value=0.016 Score=30.89 Aligned_cols=23 Identities=39% Similarity=0.625 Sum_probs=20.9
Q ss_pred EEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 89995158892799999999996
Q 005511 408 SFIFSGPTGVGKSELAKALAAYY 430 (693)
Q Consensus 408 ~ill~Gp~GtGKt~lA~~la~~l 430 (693)
.+.+.||+|+|||++++++...+
T Consensus 42 ~vaivG~sGsGKSTLl~li~gl~ 64 (251)
T d1jj7a_ 42 VTALVGPNGSGKSTVAALLQNLY 64 (251)
T ss_dssp EEEEECSTTSSHHHHHHHHTTSS
T ss_pred EEEEECCCCCCHHHHHHHHHCCC
T ss_conf 99999999984999999986143
No 172
>d1np6a_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Escherichia coli [TaxId: 562]}
Probab=96.17 E-value=0.0032 Score=35.71 Aligned_cols=27 Identities=19% Similarity=0.238 Sum_probs=23.4
Q ss_pred CCEEEECCCCCHHHHHHHHHHHHHHCC
Q ss_conf 980788899971999999999997559
Q 005511 64 NNPCLIGEPGVGKTAIAEGLAQRIASG 90 (693)
Q Consensus 64 ~~ilL~GppGtGKT~la~~la~~l~~~ 90 (693)
+-+.+.|++|+|||||++.+++.+...
T Consensus 3 Pvi~itG~~GSGKTTL~~~L~~~l~~~ 29 (170)
T d1np6a_ 3 PLLAFAAWSGTGKTTLLKKLIPALCAR 29 (170)
T ss_dssp CEEEEECCTTSCHHHHHHHHHHHHHHT
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHHHC
T ss_conf 889999189998999999999999977
No 173
>d1vmaa2 c.37.1.10 (A:82-294) GTPase domain of the signal recognition particle receptor FtsY {Thermotoga maritima [TaxId: 2336]}
Probab=96.15 E-value=0.0043 Score=34.81 Aligned_cols=38 Identities=26% Similarity=0.314 Sum_probs=26.5
Q ss_pred CCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEC
Q ss_conf 999807888999719999999999975599999889966999865
Q 005511 62 TKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDM 106 (693)
Q Consensus 62 ~~~~ilL~GppGtGKT~la~~la~~l~~~~~~~~~~~~~~~~~~~ 106 (693)
+|.-++|.||+|+||||.+-.+|.++... +.++..+.+
T Consensus 10 ~p~vi~lvGptGvGKTTTiAKLAa~~~~~-------~~kV~lit~ 47 (213)
T d1vmaa2 10 PPFVIMVVGVNGTGKTTSCGKLAKMFVDE-------GKSVVLAAA 47 (213)
T ss_dssp SCEEEEEECCTTSSHHHHHHHHHHHHHHT-------TCCEEEEEE
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHHC-------CCCEEEEEE
T ss_conf 99899998999998899999999999977-------990699960
No 174
>d3d31a2 c.37.1.12 (A:1-229) Sulfate/molybdate ABC transporter, ATP-binding protein {Methanosarcina acetivorans [TaxId: 2214]}
Probab=96.15 E-value=0.016 Score=30.96 Aligned_cols=28 Identities=25% Similarity=0.262 Sum_probs=21.9
Q ss_pred CCCCCCEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 3999980788899971999999999997
Q 005511 60 RRTKNNPCLIGEPGVGKTAIAEGLAQRI 87 (693)
Q Consensus 60 ~~~~~~ilL~GppGtGKT~la~~la~~l 87 (693)
.....-+.+.||+|+||||+.+.++..+
T Consensus 23 i~~Ge~~~liGpsGaGKSTll~~l~Gl~ 50 (229)
T d3d31a2 23 VESGEYFVILGPTGAGKTLFLELIAGFH 50 (229)
T ss_dssp ECTTCEEEEECCCTHHHHHHHHHHHTSS
T ss_pred ECCCCEEEEECCCCCCHHHHHHHHHCCC
T ss_conf 8799899999899982999999996476
No 175
>d1v43a3 c.37.1.12 (A:7-245) Hypothetical protein PH0022, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}
Probab=96.15 E-value=0.012 Score=31.82 Aligned_cols=23 Identities=26% Similarity=0.554 Sum_probs=21.0
Q ss_pred EEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 89995158892799999999996
Q 005511 408 SFIFSGPTGVGKSELAKALAAYY 430 (693)
Q Consensus 408 ~ill~Gp~GtGKt~lA~~la~~l 430 (693)
.+.+.||+|+|||++.++++..+
T Consensus 34 ~~~liGpsGaGKSTLl~~i~Gl~ 56 (239)
T d1v43a3 34 FLVLLGPSGCGKTTTLRMIAGLE 56 (239)
T ss_dssp EEEEECCTTSSHHHHHHHHHTSS
T ss_pred EEEEECCCCCHHHHHHHHHHCCC
T ss_conf 99999999982999999997589
No 176
>d1khta_ c.37.1.1 (A:) Adenylate kinase {Archaeon Methanococcus voltae [TaxId: 2188]}
Probab=96.15 E-value=0.0027 Score=36.20 Aligned_cols=38 Identities=11% Similarity=0.142 Sum_probs=29.0
Q ss_pred EEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCC
Q ss_conf 89995158892799999999996399754055335432
Q 005511 408 SFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEF 445 (693)
Q Consensus 408 ~ill~Gp~GtGKt~lA~~la~~l~~~~~~~~~~~~~~~ 445 (693)
.+++.|+||+|||++++.|++.+...+.++..+..++.
T Consensus 3 iI~i~G~~GsGKsT~~~~L~~~l~~~~~~~~~~~~~~~ 40 (190)
T d1khta_ 3 VVVVTGVPGVGSTTSSQLAMDNLRKEGVNYKMVSFGSV 40 (190)
T ss_dssp EEEEECCTTSCHHHHHHHHHHHHHTTTCCCEEEEHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCH
T ss_conf 89998999989899999999999876998699956876
No 177
>d1q3ta_ c.37.1.1 (A:) CMP kinase {Streptococcus pneumoniae [TaxId: 1313]}
Probab=96.14 E-value=0.0033 Score=35.58 Aligned_cols=22 Identities=23% Similarity=0.368 Sum_probs=19.8
Q ss_pred EEEECCCCCHHHHHHHHHHHHH
Q ss_conf 0788899971999999999997
Q 005511 66 PCLIGEPGVGKTAIAEGLAQRI 87 (693)
Q Consensus 66 ilL~GppGtGKT~la~~la~~l 87 (693)
+.+.||||+||||+|+.+|+.+
T Consensus 6 IaIdGp~GsGKgT~ak~La~~l 27 (223)
T d1q3ta_ 6 IAIDGPASSGKSTVAKIIAKDF 27 (223)
T ss_dssp EEEECSSCSSHHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHH
T ss_conf 9978999879899999999996
No 178
>d2fh5b1 c.37.1.8 (B:63-269) Signal recognition particle receptor beta-subunit {Mouse (Mus musculus) [TaxId: 10090]}
Probab=96.13 E-value=0.015 Score=30.98 Aligned_cols=24 Identities=21% Similarity=0.144 Sum_probs=20.1
Q ss_pred CCEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 980788899971999999999997
Q 005511 64 NNPCLIGEPGVGKTAIAEGLAQRI 87 (693)
Q Consensus 64 ~~ilL~GppGtGKT~la~~la~~l 87 (693)
++|++.|+||+|||+|.+++...-
T Consensus 1 k~V~ivG~~~~GKTsLl~~l~~~~ 24 (207)
T d2fh5b1 1 RAVLFVGLCDSGKTLLFVRLLTGQ 24 (207)
T ss_dssp CEEEEECSTTSSHHHHHHHHHHSC
T ss_pred CEEEEECCCCCCHHHHHHHHHCCC
T ss_conf 989999999989899999998099
No 179
>d2awna2 c.37.1.12 (A:4-235) Maltose transport protein MalK, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=96.12 E-value=0.0068 Score=33.42 Aligned_cols=23 Identities=39% Similarity=0.702 Sum_probs=20.7
Q ss_pred EEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 89995158892799999999996
Q 005511 408 SFIFSGPTGVGKSELAKALAAYY 430 (693)
Q Consensus 408 ~ill~Gp~GtGKt~lA~~la~~l 430 (693)
.+.+.||+|+|||++.++++...
T Consensus 28 i~~liGpsGsGKSTLl~~i~Gl~ 50 (232)
T d2awna2 28 FVVFVGPSGCGKSTLLRMIAGLE 50 (232)
T ss_dssp EEEEECCTTSSHHHHHHHHHTSS
T ss_pred EEEEECCCCCHHHHHHHHHHCCC
T ss_conf 99999899982999999996587
No 180
>d1u0ja_ c.37.1.20 (A:) Rep 40 protein helicase domain {Adeno-associated virus 2, AAV2 [TaxId: 10804]}
Probab=96.11 E-value=0.031 Score=28.91 Aligned_cols=117 Identities=15% Similarity=0.143 Sum_probs=61.3
Q ss_pred HHHHHHHHH-C-CCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 999999970-3-99998078889997199999999999755999998899669998652101397446618999999999
Q 005511 51 IERVVQILG-R-RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLME 128 (693)
Q Consensus 51 ~~~l~~~l~-~-~~~~~ilL~GppGtGKT~la~~la~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 128 (693)
...+..++. . +..+.++|+|||+||||+++.++++.+.. . ..++- .... |.
T Consensus 90 ~~~l~~~L~~~~~k~n~~~l~G~~~tGKS~f~~~i~~~lg~----------~-~~~~~----~~~~------------f~ 142 (267)
T d1u0ja_ 90 ASVFLGWATKKFGKRNTIWLFGPATTGKTNIAEAIAHTVPF----------Y-GCVNW----TNEN------------FP 142 (267)
T ss_dssp HHHHHHHHTTCSTTCCEEEEECSTTSSHHHHHHHHHHHSSC----------E-EECCT----TCSS------------CT
T ss_pred HHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCC----------H-HHCCC----CCCC------------CC
T ss_conf 99999997599976179999858988778999999998362----------0-20026----6788------------62
Q ss_pred HHHHCCCEEEEEECCCHHHHCCCCCCHHHHHHHHHHHHCC----------------CCCEEEEEECHHHHHH-----HHH
Q ss_conf 9970898499991600331089998847699988331107----------------9817999743588985-----420
Q 005511 129 EIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLAR----------------GELQCIGATTLDEYRK-----HIE 187 (693)
Q Consensus 129 ~~~~~~~~iL~iDEid~l~~~~~~~~~~~~~~~L~~~l~~----------------~~i~iI~~t~~~~~~~-----~~~ 187 (693)
.+.-.+..++++||...-.. ..+.++.++.. ....+|.++|...... ...
T Consensus 143 l~~l~~k~~~~~~e~~~~~~---------~~~~~K~l~gGd~i~v~~K~k~~~~~~~~p~li~s~n~i~~~~~~~~~~~~ 213 (267)
T d1u0ja_ 143 FNDCVDKMVIWWEEGKMTAK---------VVESAKAILGGSKVRVDQKCKSSAQIDPTPVIVTSNTNMCAVIDGNSTTFE 213 (267)
T ss_dssp TGGGSSCSEEEECSCCEETT---------THHHHHHHHTTCCEEC------CCEECCCCEEEEESSCTTCEEETTEEECT
T ss_pred CCCCCCCEEEEEECCCCCCC---------HHHHHHHHCCCCCEEEECCCCCCCEEECCEEEEEECCCCCCCCCCCCCCCC
T ss_conf 20037987999838885300---------789999864899368532038970740770899948976524577866430
Q ss_pred CCHHHHCCCCCCCCCC
Q ss_conf 3988854678311589
Q 005511 188 KDPALERRFQPVKVPE 203 (693)
Q Consensus 188 l~~~l~~Rf~~i~~~~ 203 (693)
-+.++.||+..+.|+.
T Consensus 214 ~~~~l~~R~~~~~F~~ 229 (267)
T d1u0ja_ 214 HQQPLQDRMFKFELTR 229 (267)
T ss_dssp THHHHHTTEEEEECCS
T ss_pred CCHHHHHHEEEEECCC
T ss_conf 0257565179987899
No 181
>d1a1va1 c.37.1.14 (A:190-325) HCV helicase domain {Human hepatitis C virus (HCV), different isolates [TaxId: 11103]}
Probab=96.10 E-value=0.0082 Score=32.87 Aligned_cols=24 Identities=17% Similarity=0.105 Sum_probs=18.1
Q ss_pred CCCEEEECCCCCHHHHHHHHHHHH
Q ss_conf 998078889997199999999999
Q 005511 63 KNNPCLIGEPGVGKTAIAEGLAQR 86 (693)
Q Consensus 63 ~~~ilL~GppGtGKT~la~~la~~ 86 (693)
....++.+|+|+|||.++-.++..
T Consensus 8 ~~~~ll~apTGsGKT~~~~~~~~~ 31 (136)
T d1a1va1 8 FQVAHLHAPTGSGKSTKVPAAYAA 31 (136)
T ss_dssp CEEEEEECCTTSCTTTHHHHHHHT
T ss_pred CCEEEEEECCCCCHHHHHHHHHHH
T ss_conf 888999968877999999999998
No 182
>d1vpla_ c.37.1.12 (A:) Putative ABC transporter TM0544 {Thermotoga maritima [TaxId: 2336]}
Probab=96.09 E-value=0.015 Score=30.98 Aligned_cols=27 Identities=30% Similarity=0.299 Sum_probs=20.0
Q ss_pred CCCCCEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 999980788899971999999999997
Q 005511 61 RTKNNPCLIGEPGVGKTAIAEGLAQRI 87 (693)
Q Consensus 61 ~~~~~ilL~GppGtGKT~la~~la~~l 87 (693)
.+..-+-|.||.|+||||+.+.++..+
T Consensus 26 ~~Gei~glvG~nGaGKSTLl~~l~G~~ 52 (238)
T d1vpla_ 26 EEGEIFGLIGPNGAGKTTTLRIISTLI 52 (238)
T ss_dssp CTTCEEEEECCTTSSHHHHHHHHTTSS
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHCCC
T ss_conf 489799999999999999999996698
No 183
>d1m7ga_ c.37.1.4 (A:) Adenosine-5'phosphosulfate kinase (APS kinase) {Fungus (Penicillium chrysogenum) [TaxId: 5076]}
Probab=96.05 E-value=0.0035 Score=35.42 Aligned_cols=39 Identities=26% Similarity=0.287 Sum_probs=27.7
Q ss_pred EEEEECCCCCCHHHHHHHHHHHHCC-CCCCEEEECCCCCC
Q ss_conf 8999515889279999999999639-97540553354322
Q 005511 408 SFIFSGPTGVGKSELAKALAAYYFG-SEEAMIRLDMSEFM 446 (693)
Q Consensus 408 ~ill~Gp~GtGKt~lA~~la~~l~~-~~~~~~~~~~~~~~ 446 (693)
.++|+|.||+|||++|+.|++.+.. .+.+++.++...+.
T Consensus 26 vIwltGlsGsGKTTia~~L~~~l~~~~~~~~~~ldgD~iR 65 (208)
T d1m7ga_ 26 TIWLTGLSASGKSTLAVELEHQLVRDRRVHAYRLDGDNIR 65 (208)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHHHHHCCCEEEECHHHHT
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHHCCCEEEEECCHHHH
T ss_conf 9999899999989999999988777427508997536788
No 184
>d1ly1a_ c.37.1.1 (A:) Polynucleotide kinase, kinase domain {Bacteriophage T4 [TaxId: 10665]}
Probab=96.03 E-value=0.0025 Score=36.41 Aligned_cols=23 Identities=30% Similarity=0.372 Sum_probs=19.8
Q ss_pred CEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 80788899971999999999997
Q 005511 65 NPCLIGEPGVGKTAIAEGLAQRI 87 (693)
Q Consensus 65 ~ilL~GppGtGKT~la~~la~~l 87 (693)
-++++||||+||||+|+.+++..
T Consensus 4 lIii~G~pGsGKTTla~~L~~~~ 26 (152)
T d1ly1a_ 4 IILTIGCPGSGKSTWAREFIAKN 26 (152)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHHHC
T ss_conf 99998999999999999999957
No 185
>d1sq5a_ c.37.1.6 (A:) Pantothenate kinase PanK {Escherichia coli [TaxId: 562]}
Probab=96.00 E-value=0.014 Score=31.19 Aligned_cols=50 Identities=22% Similarity=0.346 Sum_probs=35.0
Q ss_pred HCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCC--CCCCEEEECCCCCCC
Q ss_conf 027899998438999515889279999999999639--975405533543221
Q 005511 397 VGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFG--SEEAMIRLDMSEFME 447 (693)
Q Consensus 397 ~~~~~~~~~~~~ill~Gp~GtGKt~lA~~la~~l~~--~~~~~~~~~~~~~~~ 447 (693)
++...++.|.. +-+.|++|+|||++|+.|+..+-. .+.....+.+-.|..
T Consensus 72 l~~~~~k~P~i-IGIaG~sgSGKSTla~~L~~lL~~~~~~~~v~~Is~D~F~~ 123 (308)
T d1sq5a_ 72 LGTNGQRIPYI-ISIAGSVAVGKSTTARVLQALLSRWPEHRRVELITTDGFLH 123 (308)
T ss_dssp HTCC-CCCCEE-EEEEECTTSSHHHHHHHHHHHHTTSTTCCCEEEEEGGGGBC
T ss_pred HCCCCCCCCEE-EEEECCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEEEEEC
T ss_conf 53447899889-99968999987689999999973046899659995215689
No 186
>d2hyda1 c.37.1.12 (A:324-578) Putative multidrug export ATP-binding/permease protein SAV1866 {Staphylococcus aureus [TaxId: 1280]}
Probab=95.97 E-value=0.007 Score=33.33 Aligned_cols=29 Identities=14% Similarity=0.255 Sum_probs=20.9
Q ss_pred HCCCCCCEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 03999980788899971999999999997
Q 005511 59 GRRTKNNPCLIGEPGVGKTAIAEGLAQRI 87 (693)
Q Consensus 59 ~~~~~~~ilL~GppGtGKT~la~~la~~l 87 (693)
...+...+.+.||+|+||||+++.++..+
T Consensus 40 ~i~~Ge~vaivG~sGsGKSTLl~ll~gl~ 68 (255)
T d2hyda1 40 SIEKGETVAFVGMSGGGKSTLINLIPRFY 68 (255)
T ss_dssp EECTTCEEEEECSTTSSHHHHHTTTTTSS
T ss_pred EECCCCEEEEECCCCCCHHHHHHHHHHCC
T ss_conf 98399899998899980999999997127
No 187
>d1yj5a2 c.37.1.1 (A:351-522) 5' polynucleotide kinase-3' phosphatase, C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=95.96 E-value=0.0021 Score=36.88 Aligned_cols=27 Identities=19% Similarity=0.276 Sum_probs=22.0
Q ss_pred CCCCCEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 999980788899971999999999997
Q 005511 61 RTKNNPCLIGEPGVGKTAIAEGLAQRI 87 (693)
Q Consensus 61 ~~~~~ilL~GppGtGKT~la~~la~~l 87 (693)
+.+.-++++|+||+||||+|+.++...
T Consensus 12 ~~p~liil~G~pGsGKST~a~~l~~~~ 38 (172)
T d1yj5a2 12 PNPEVVVAVGFPGAGKSTFIQEHLVSA 38 (172)
T ss_dssp SSCCEEEEECCTTSSHHHHHHHHTGGG
T ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHC
T ss_conf 999899998999998999999999765
No 188
>d1mv5a_ c.37.1.12 (A:) Multidrug resistance ABC transporter LmrA, C-terminal domain {Lactococcus lactis [TaxId: 1358]}
Probab=95.96 E-value=0.028 Score=29.14 Aligned_cols=22 Identities=41% Similarity=0.831 Sum_probs=12.0
Q ss_pred EEEECCCCCCHHHHHHHHHHHH
Q ss_conf 9995158892799999999996
Q 005511 409 FIFSGPTGVGKSELAKALAAYY 430 (693)
Q Consensus 409 ill~Gp~GtGKt~lA~~la~~l 430 (693)
+.+.||+|+|||+++++++..+
T Consensus 31 vaivG~sGsGKSTLl~ll~gl~ 52 (242)
T d1mv5a_ 31 IAFAGPSGGGKSTIFSLLERFY 52 (242)
T ss_dssp EEEECCTTSSHHHHHHHHTTSS
T ss_pred EEEECCCCCCHHHHHHHHHHHH
T ss_conf 9999999997999999999960
No 189
>d1rz3a_ c.37.1.6 (A:) Hypothetical protein rbstp0775 {Bacillus stearothermophilus [TaxId: 1422]}
Probab=95.95 E-value=0.0073 Score=33.21 Aligned_cols=42 Identities=19% Similarity=0.214 Sum_probs=27.5
Q ss_pred HHHHHHHHHHHCCC-CCC--EEEECCCCCHHHHHHHHHHHHHHCC
Q ss_conf 99999999970399-998--0788899971999999999997559
Q 005511 49 PQIERVVQILGRRT-KNN--PCLIGEPGVGKTAIAEGLAQRIASG 90 (693)
Q Consensus 49 ~~~~~l~~~l~~~~-~~~--ilL~GppGtGKT~la~~la~~l~~~ 90 (693)
+.+..|........ ... +-+.||+|+||||+|+.++..+...
T Consensus 5 ~~~~~~~~~~~~~~~~~~~iIgI~G~~GSGKSTla~~L~~~l~~~ 49 (198)
T d1rz3a_ 5 DRIDFLCKTILAIKTAGRLVLGIDGLSRSGKTTLANQLSQTLREQ 49 (198)
T ss_dssp HHHHHHHHHHHTSCCSSSEEEEEEECTTSSHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCC
T ss_conf 999999999985267998899978988789999999999983634
No 190
>d1nksa_ c.37.1.1 (A:) Adenylate kinase {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]}
Probab=95.93 E-value=0.0037 Score=35.28 Aligned_cols=24 Identities=25% Similarity=0.512 Sum_probs=13.2
Q ss_pred EEEECCCCCHHHHHHHHHHHHHHC
Q ss_conf 078889997199999999999755
Q 005511 66 PCLIGEPGVGKTAIAEGLAQRIAS 89 (693)
Q Consensus 66 ilL~GppGtGKT~la~~la~~l~~ 89 (693)
+++.|+||+||||+++.+++.+..
T Consensus 4 ivi~G~~GsGKTT~~~~La~~L~~ 27 (194)
T d1nksa_ 4 GIVTGIPGVGKSTVLAKVKEILDN 27 (194)
T ss_dssp EEEEECTTSCHHHHHHHHHHHHHT
T ss_pred EEEECCCCCCHHHHHHHHHHHHHH
T ss_conf 999898998989999999999987
No 191
>d1lvga_ c.37.1.1 (A:) Guanylate kinase {Mouse (Mus musculus) [TaxId: 10090]}
Probab=95.93 E-value=0.0032 Score=35.71 Aligned_cols=26 Identities=31% Similarity=0.418 Sum_probs=22.1
Q ss_pred CCEEEECCCCCHHHHHHHHHHHHHHC
Q ss_conf 98078889997199999999999755
Q 005511 64 NNPCLIGEPGVGKTAIAEGLAQRIAS 89 (693)
Q Consensus 64 ~~ilL~GppGtGKT~la~~la~~l~~ 89 (693)
++++|+||+|+|||++++.+++....
T Consensus 1 rpIvl~GPsGsGK~tl~~~L~~~~~~ 26 (190)
T d1lvga_ 1 RPVVLSGPSGAGKSTLLKKLFQEHSS 26 (190)
T ss_dssp CCEEEECCTTSSHHHHHHHHHHHHTT
T ss_pred CEEEEECCCCCCHHHHHHHHHHHCCC
T ss_conf 91999999999999999999974887
No 192
>d2fz4a1 c.37.1.19 (A:24-229) DNA repair protein RAD25 {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=95.92 E-value=0.02 Score=30.26 Aligned_cols=92 Identities=17% Similarity=0.242 Sum_probs=43.2
Q ss_pred EEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCCH--HHHHHHCCCCC-C-CCCCC---------CCCHHHHHH
Q ss_conf 89995158892799999999996399754055335432210--00110028999-8-76767---------512266999
Q 005511 408 SFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMER--HTVSKLIGSPP-G-YVGYT---------EGGQLTEAV 474 (693)
Q Consensus 408 ~ill~Gp~GtGKt~lA~~la~~l~~~~~~~~~~~~~~~~~~--~~~~~l~g~~~-~-~~g~~---------~~~~l~~~~ 474 (693)
..++..|+|+|||.+|-.++..+. ...++.+....+... ..... ++... + +.|.. ....+....
T Consensus 87 ~~ll~~~tG~GKT~~a~~~~~~~~--~~~Liv~p~~~L~~q~~~~~~~-~~~~~~~~~~~~~~~~~~i~i~t~~~~~~~~ 163 (206)
T d2fz4a1 87 RGCIVLPTGSGKTHVAMAAINELS--TPTLIVVPTLALAEQWKERLGI-FGEEYVGEFSGRIKELKPLTVSTYDSAYVNA 163 (206)
T ss_dssp EEEEEESSSTTHHHHHHHHHHHSC--SCEEEEESSHHHHHHHHHHHGG-GCGGGEEEESSSCBCCCSEEEEEHHHHHHTH
T ss_pred CCEEEECCCCCCEEHHHHHHHHHC--CCEEEEECCCCHHHHHHHHHHH-HCCCCHHHCCCCCCCCCCCCCCEEHHHHHHH
T ss_conf 909995789982643776787746--7245787242248999999986-1551111014653210210012322555536
Q ss_pred --HCCCCEEEEECCCCCCCHHHHHHHHHHH
Q ss_conf --8099989998467422988999999974
Q 005511 475 --RRRPYTVVLFDEIEKAHPDVFNMMLQIL 502 (693)
Q Consensus 475 --~~~~~~vl~iDEid~l~~~~~~~Ll~~l 502 (693)
.....++|++||++.+.......++..+
T Consensus 164 ~~~~~~~~lvIiDEaH~~~a~~~~~i~~~~ 193 (206)
T d2fz4a1 164 EKLGNRFMLLIFDEVHHLPAESYVQIAQMS 193 (206)
T ss_dssp HHHTTTCSEEEEECSSCCCTTTHHHHHHTC
T ss_pred HHHCCCCCEEEEECCEECCCHHHHHHHHCC
T ss_conf 765775779999898217837999998506
No 193
>d1nksa_ c.37.1.1 (A:) Adenylate kinase {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]}
Probab=95.88 E-value=0.0053 Score=34.16 Aligned_cols=37 Identities=19% Similarity=0.170 Sum_probs=28.6
Q ss_pred EEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEECCCC
Q ss_conf 8999515889279999999999639975405533543
Q 005511 408 SFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSE 444 (693)
Q Consensus 408 ~ill~Gp~GtGKt~lA~~la~~l~~~~~~~~~~~~~~ 444 (693)
.++|.|+||+|||++++.|++.+...+..+..+..++
T Consensus 3 iivi~G~~GsGKTT~~~~La~~L~~~~~~~~~~~~~d 39 (194)
T d1nksa_ 3 IGIVTGIPGVGKSTVLAKVKEILDNQGINNKIINYGD 39 (194)
T ss_dssp EEEEEECTTSCHHHHHHHHHHHHHTTTCCEEEEEHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECCC
T ss_conf 9999898998989999999999987699889997898
No 194
>d2qm8a1 c.37.1.10 (A:5-327) Metallochaperone MeaB {Methylobacterium extorquens [TaxId: 408]}
Probab=95.83 E-value=0.029 Score=29.06 Aligned_cols=54 Identities=19% Similarity=0.339 Sum_probs=28.5
Q ss_pred HHHHHHHHHCCCCCC--EEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCC
Q ss_conf 999999970399998--07888999719999999999975599999889966999865210
Q 005511 51 IERVVQILGRRTKNN--PCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLL 109 (693)
Q Consensus 51 ~~~l~~~l~~~~~~~--ilL~GppGtGKT~la~~la~~l~~~~~~~~~~~~~~~~~~~~~~ 109 (693)
...+...+.....+. +-+.||||+||||++..+++.+.... ...-++.++.+.-
T Consensus 37 ~~~~~~~~~~~~~~~~~igitG~pGaGKSTli~~l~~~~~~~g-----~~vaViavDpss~ 92 (323)
T d2qm8a1 37 VRDLIDAVLPQTGRAIRVGITGVPGVGKSTTIDALGSLLTAAG-----HKVAVLAVDPSST 92 (323)
T ss_dssp HHHHHHHHGGGCCCSEEEEEECCTTSCHHHHHHHHHHHHHHTT-----CCEEEEEECGGGG
T ss_pred HHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCC-----CCEEEEECCCCCH
T ss_conf 9999998633069815986117998889999999999876368-----7513443465547
No 195
>d1yksa1 c.37.1.14 (A:185-324) YFV helicase domain {Yellow fever virus [TaxId: 11089]}
Probab=95.83 E-value=0.0058 Score=33.89 Aligned_cols=28 Identities=25% Similarity=0.186 Sum_probs=20.0
Q ss_pred CCCCEEEECCCCCHHHHHH-HHHHHHHHC
Q ss_conf 9998078889997199999-999999755
Q 005511 62 TKNNPCLIGEPGVGKTAIA-EGLAQRIAS 89 (693)
Q Consensus 62 ~~~~ilL~GppGtGKT~la-~~la~~l~~ 89 (693)
+..+++|++|+|+|||..+ .++.+....
T Consensus 6 ~~~~~il~~~tGsGKT~~~~~~~~~~~~~ 34 (140)
T d1yksa1 6 KGMTTVLDFHPGAGKTRRFLPQILAECAR 34 (140)
T ss_dssp TTCEEEECCCTTSSTTTTHHHHHHHHHHH
T ss_pred CCCCEEEECCCCCCHHHHHHHHHHHHHHH
T ss_conf 59967998179988559999999997531
No 196
>d1gkya_ c.37.1.1 (A:) Guanylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=95.83 E-value=0.0035 Score=35.43 Aligned_cols=26 Identities=19% Similarity=0.341 Sum_probs=21.9
Q ss_pred CCEEEECCCCCHHHHHHHHHHHHHHC
Q ss_conf 98078889997199999999999755
Q 005511 64 NNPCLIGEPGVGKTAIAEGLAQRIAS 89 (693)
Q Consensus 64 ~~ilL~GppGtGKT~la~~la~~l~~ 89 (693)
++++|+||+|+|||++++.+++....
T Consensus 2 rpIvl~GpsG~GK~tl~~~L~~~~~~ 27 (186)
T d1gkya_ 2 RPIVISGPSGTGKSTLLKKLFAEYPD 27 (186)
T ss_dssp CCEEEECCTTSSHHHHHHHHHHHCTT
T ss_pred CEEEEECCCCCCHHHHHHHHHHHCCC
T ss_conf 76999899999989999999974886
No 197
>d1szpa2 c.37.1.11 (A:145-395) DNA repair protein Rad51, catalytic domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=95.82 E-value=0.022 Score=29.85 Aligned_cols=20 Identities=35% Similarity=0.355 Sum_probs=10.0
Q ss_pred EEEEECCCCCCHHHHHHHHH
Q ss_conf 89995158892799999999
Q 005511 408 SFIFSGPTGVGKSELAKALA 427 (693)
Q Consensus 408 ~ill~Gp~GtGKt~lA~~la 427 (693)
.++++||||+|||+++..++
T Consensus 36 ~~li~G~pGsGKT~l~lq~~ 55 (251)
T d1szpa2 36 ITELFGEFRTGKSQLCHTLA 55 (251)
T ss_dssp EEEEEESTTSSHHHHHHHHT
T ss_pred EEEEECCCCCCHHHHHHHHH
T ss_conf 99998389998899999999
No 198
>d1wb9a2 c.37.1.12 (A:567-800) DNA repair protein MutS, the C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=95.79 E-value=0.02 Score=30.20 Aligned_cols=112 Identities=14% Similarity=0.127 Sum_probs=51.5
Q ss_pred CCCEEEECCCCCHHHHHHHHHHHHHH--C--CCCCCCCCCCEE-----EEEECCC---CCCC-CCCCCHHHHHHHHHHHH
Q ss_conf 99807888999719999999999975--5--999998899669-----9986521---0139-74466189999999999
Q 005511 63 KNNPCLIGEPGVGKTAIAEGLAQRIA--S--GDVPDTIEGKKV-----ITLDMGL---LVAG-TKYRGEFEERLKKLMEE 129 (693)
Q Consensus 63 ~~~ilL~GppGtGKT~la~~la~~l~--~--~~~~~~~~~~~~-----~~~~~~~---~~~~-~~~~g~~~~~~~~~~~~ 129 (693)
.+.++++||...|||++.+.++--.. . ..+|- ....+ ++..+.. +..+ +.+. .-..++..++..
T Consensus 41 ~~~~iiTGpN~~GKSt~lk~i~l~~~laq~G~~VpA--~~a~~~~~d~I~~~~~~~d~~~~~~S~F~-~E~~~~~~il~~ 117 (234)
T d1wb9a2 41 RRMLIITGPNMGGKSTYMRQTALIALMAYIGSYVPA--QKVEIGPIDRIFTRVGAADDLASGRSTFM-VEMTETANILHN 117 (234)
T ss_dssp SCEEEEECCTTSSHHHHHHHHHHHHHHHTTTCCBSS--SEEEECCCCEEEEEEC-----------CH-HHHHHHHHHHHH
T ss_pred CEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCEEEC--CCEECCCCHHHEEEECCCCCCCCCHHHHH-HHHHHHHHHHHH
T ss_conf 539999546731368999987999999872976741--76661344202348746753436531899-999999999974
Q ss_pred HHHCCCEEEEEECCCHHHHCCCCCCHHHHH-HHHHHHHCCCCCEEEEEECHHHH
Q ss_conf 970898499991600331089998847699-98833110798179997435889
Q 005511 130 IKQSDEIILFIDEVHTLIGAGAAEGAIDAA-NILKPSLARGELQCIGATTLDEY 182 (693)
Q Consensus 130 ~~~~~~~iL~iDEid~l~~~~~~~~~~~~~-~~L~~~l~~~~i~iI~~t~~~~~ 182 (693)
+. ...++++||+-+=. +...+.... .++..+.......++++|...+.
T Consensus 118 ~~--~~sLvliDE~~~gT---~~~eg~~l~~a~l~~l~~~~~~~~i~tTH~~~l 166 (234)
T d1wb9a2 118 AT--EYSLVLMDEIGRGT---STYDGLSLAWACAENLANKIKALTLFATHYFEL 166 (234)
T ss_dssp CC--TTEEEEEESCCCCS---SSSHHHHHHHHHHHHHHHTTCCEEEEECSCGGG
T ss_pred CC--CCCEEEECCCCCCC---CHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHH
T ss_conf 54--66088532223587---745666789876454320454428985246877
No 199
>d1odfa_ c.37.1.6 (A:) Hypothetical protein Ygr205W {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=95.78 E-value=0.023 Score=29.81 Aligned_cols=61 Identities=20% Similarity=0.290 Sum_probs=35.5
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCC---CCCCEEEECCCCCCC
Q ss_conf 9999999999975027899998438999515889279999999999639---975405533543221
Q 005511 384 AVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFG---SEEAMIRLDMSEFME 447 (693)
Q Consensus 384 ~i~~l~~~i~~~~~~~~~~~~~~~~ill~Gp~GtGKt~lA~~la~~l~~---~~~~~~~~~~~~~~~ 447 (693)
.++.+...+..+... ..++|. .+-+.|++|+|||+++..|...+.. .......+.+-+|+-
T Consensus 8 ~~~~~~~~~~~~~~~--~~~~P~-iIGi~G~qGSGKSTl~~~l~~~L~~~~~~~~~v~~iS~DdfY~ 71 (286)
T d1odfa_ 8 TIEFLDKYIPEWFET--GNKCPL-FIFFSGPQGSGKSFTSIQIYNHLMEKYGGEKSIGYASIDDFYL 71 (286)
T ss_dssp HHHHHHHHHHHHHTT--TCCSCE-EEEEECCTTSSHHHHHHHHHHHHHHHHGGGSCEEEEEGGGGBC
T ss_pred HHHHHHHHHHHHHHC--CCCCCE-EEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCC
T ss_conf 999999999999704--899988-9983799878899999999999998727786067635677778
No 200
>d3dhwc1 c.37.1.12 (C:1-240) Methionine import ATP-binding protein MetN {Escherichia coli [TaxId: 562]}
Probab=95.75 E-value=0.0042 Score=34.83 Aligned_cols=27 Identities=19% Similarity=0.227 Sum_probs=19.3
Q ss_pred CCCCCEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 999980788899971999999999997
Q 005511 61 RTKNNPCLIGEPGVGKTAIAEGLAQRI 87 (693)
Q Consensus 61 ~~~~~ilL~GppGtGKT~la~~la~~l 87 (693)
.....+-+.||+|+||||+++.++...
T Consensus 29 ~~Ge~~~iiG~sGsGKSTLl~~i~Gl~ 55 (240)
T d3dhwc1 29 PAGQIYGVIGASGAGKSTLIRCVNLLE 55 (240)
T ss_dssp CSSCEEEEEESTTSSHHHHHHHHTTSS
T ss_pred CCCCEEEEECCCCCCHHHHHHHHCCCC
T ss_conf 699799998999898889999875886
No 201
>d1wf3a1 c.37.1.8 (A:3-180) GTPase Era, N-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=95.73 E-value=0.044 Score=27.84 Aligned_cols=22 Identities=27% Similarity=0.536 Sum_probs=15.1
Q ss_pred CEEEECCCCCHHHHHHHHHHHH
Q ss_conf 8078889997199999999999
Q 005511 65 NPCLIGEPGVGKTAIAEGLAQR 86 (693)
Q Consensus 65 ~ilL~GppGtGKT~la~~la~~ 86 (693)
.+.+.|.+|+|||++++++...
T Consensus 7 ~I~lvG~~~~GKSSLin~l~~~ 28 (178)
T d1wf3a1 7 FVAIVGKPNVGKSTLLNNLLGV 28 (178)
T ss_dssp EEEEECSTTSSHHHHHHHHHTS
T ss_pred EEEEECCCCCCHHHHHHHHHCC
T ss_conf 9999999999999999999688
No 202
>d2pmka1 c.37.1.12 (A:467-707) Haemolysin B ATP-binding protein {Escherichia coli [TaxId: 562]}
Probab=95.71 E-value=0.024 Score=29.67 Aligned_cols=23 Identities=35% Similarity=0.605 Sum_probs=21.1
Q ss_pred EEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 89995158892799999999996
Q 005511 408 SFIFSGPTGVGKSELAKALAAYY 430 (693)
Q Consensus 408 ~ill~Gp~GtGKt~lA~~la~~l 430 (693)
.+.++||+|+|||++++++...+
T Consensus 31 ~vaIvG~sGsGKSTLl~ll~gl~ 53 (241)
T d2pmka1 31 VIGIVGRSGSGKSTLTKLIQRFY 53 (241)
T ss_dssp EEEEECSTTSSHHHHHHHHTTSS
T ss_pred EEEEECCCCCCHHHHHHHHHHCC
T ss_conf 99999999998999999997357
No 203
>d1r8sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARF1 [TaxId: 9606]}
Probab=95.71 E-value=0.036 Score=28.40 Aligned_cols=21 Identities=19% Similarity=0.287 Sum_probs=13.6
Q ss_pred EEEECCCCCCHHHHHHHHHHH
Q ss_conf 999515889279999999999
Q 005511 409 FIFSGPTGVGKSELAKALAAY 429 (693)
Q Consensus 409 ill~Gp~GtGKt~lA~~la~~ 429 (693)
+++.|+||+|||++...+...
T Consensus 3 ivlvG~~~vGKSsLi~~l~~~ 23 (160)
T d1r8sa_ 3 ILMVGLDAAGKTTILYKLKLG 23 (160)
T ss_dssp EEEECSTTSSHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHCC
T ss_conf 999999998989999999659
No 204
>d1mv5a_ c.37.1.12 (A:) Multidrug resistance ABC transporter LmrA, C-terminal domain {Lactococcus lactis [TaxId: 1358]}
Probab=95.61 E-value=0.0061 Score=33.75 Aligned_cols=27 Identities=22% Similarity=0.254 Sum_probs=22.3
Q ss_pred CCCCCEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 999980788899971999999999997
Q 005511 61 RTKNNPCLIGEPGVGKTAIAEGLAQRI 87 (693)
Q Consensus 61 ~~~~~ilL~GppGtGKT~la~~la~~l 87 (693)
.+...+.+.||+|+||||+++.++..+
T Consensus 26 ~~Ge~vaivG~sGsGKSTLl~ll~gl~ 52 (242)
T d1mv5a_ 26 QPNSIIAFAGPSGGGKSTIFSLLERFY 52 (242)
T ss_dssp CTTEEEEEECCTTSSHHHHHHHHTTSS
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHH
T ss_conf 599999999999997999999999960
No 205
>d2p67a1 c.37.1.10 (A:1-327) LAO/AO transport system kinase ArgK {Escherichia coli [TaxId: 562]}
Probab=95.54 E-value=0.052 Score=27.37 Aligned_cols=38 Identities=18% Similarity=0.342 Sum_probs=25.3
Q ss_pred HHHHHHHHCCCCC--CEEEECCCCCHHHHHHHHHHHHHHC
Q ss_conf 9999997039999--8078889997199999999999755
Q 005511 52 ERVVQILGRRTKN--NPCLIGEPGVGKTAIAEGLAQRIAS 89 (693)
Q Consensus 52 ~~l~~~l~~~~~~--~ilL~GppGtGKT~la~~la~~l~~ 89 (693)
.++...+.....+ -+-+.||||+||||++..+++.+..
T Consensus 41 ~~ll~~~~~~~~~~~~IgitG~pGaGKSTLi~~l~~~~~~ 80 (327)
T d2p67a1 41 TQLLDAIMPYCGNTLRLGVTGTPGAGKSTFLEAFGMLLIR 80 (327)
T ss_dssp HHHHHHHGGGCSCSEEEEEEECTTSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHH
T ss_conf 9999986531698328974389999899999999999975
No 206
>d1gkub1 c.37.1.16 (B:1-250) Helicase-like "domain" of reverse gyrase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=95.54 E-value=0.014 Score=31.33 Aligned_cols=23 Identities=39% Similarity=0.729 Sum_probs=13.5
Q ss_pred EEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 89995158892799999999996
Q 005511 408 SFIFSGPTGVGKSELAKALAAYY 430 (693)
Q Consensus 408 ~ill~Gp~GtGKt~lA~~la~~l 430 (693)
++++.+|+|+|||.++-..+...
T Consensus 60 ~~~i~apTGsGKT~~~~~~~~~~ 82 (237)
T d1gkub1 60 SFAATAPTGVGKTSFGLAMSLFL 82 (237)
T ss_dssp CEECCCCBTSCSHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHH
T ss_conf 77999268976999999999999
No 207
>d1gm5a3 c.37.1.19 (A:286-549) RecG helicase domain {Thermotoga maritima [TaxId: 2336]}
Probab=95.48 E-value=0.037 Score=28.38 Aligned_cols=57 Identities=16% Similarity=0.232 Sum_probs=37.3
Q ss_pred CHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCC
Q ss_conf 938999999999999750278999984389995158892799999999996399754055335432
Q 005511 380 GQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEF 445 (693)
Q Consensus 380 Gq~~~i~~l~~~i~~~~~~~~~~~~~~~~ill~Gp~GtGKt~lA~~la~~l~~~~~~~~~~~~~~~ 445 (693)
.|..+++.+...+.... |. +-||.|..|+|||.+|-..+......+.....+-..+.
T Consensus 87 ~Q~~ai~ei~~d~~~~~--------~m-~rLL~GdvGSGKT~Va~~a~~~~~~~g~q~~~m~Pt~~ 143 (264)
T d1gm5a3 87 AQKRAHQEIRNDMISEK--------PM-NRLLQGDVGSGKTVVAQLAILDNYEAGFQTAFMVPTSI 143 (264)
T ss_dssp HHHHHHHHHHHHHHSSS--------CC-CCEEECCSSSSHHHHHHHHHHHHHHHTSCEEEECSCHH
T ss_pred HHHHHHHHHHHHHHCCC--------CC-EEEEECCCCCCCCHHHHHHHHHHHHCCCCEEEEEEHHH
T ss_conf 37888999998762367--------53-15666353556659999999998851355058740476
No 208
>d3d31a2 c.37.1.12 (A:1-229) Sulfate/molybdate ABC transporter, ATP-binding protein {Methanosarcina acetivorans [TaxId: 2214]}
Probab=95.47 E-value=0.0097 Score=32.36 Aligned_cols=23 Identities=35% Similarity=0.702 Sum_probs=21.0
Q ss_pred EEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 89995158892799999999996
Q 005511 408 SFIFSGPTGVGKSELAKALAAYY 430 (693)
Q Consensus 408 ~ill~Gp~GtGKt~lA~~la~~l 430 (693)
.+.+.||+|+|||++.++++...
T Consensus 28 ~~~liGpsGaGKSTll~~l~Gl~ 50 (229)
T d3d31a2 28 YFVILGPTGAGKTLFLELIAGFH 50 (229)
T ss_dssp EEEEECCCTHHHHHHHHHHHTSS
T ss_pred EEEEECCCCCCHHHHHHHHHCCC
T ss_conf 99999899982999999996476
No 209
>d1ksha_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus musculus), ARL2 [TaxId: 10090]}
Probab=95.47 E-value=0.0071 Score=33.31 Aligned_cols=21 Identities=19% Similarity=0.425 Sum_probs=14.9
Q ss_pred EEEEECCCCCCHHHHHHHHHH
Q ss_conf 899951588927999999999
Q 005511 408 SFIFSGPTGVGKSELAKALAA 428 (693)
Q Consensus 408 ~ill~Gp~GtGKt~lA~~la~ 428 (693)
.+++.|++|+|||++...+..
T Consensus 4 ki~ivG~~~~GKTsLi~~l~~ 24 (165)
T d1ksha_ 4 RLLMLGLDNAGKTTILKKFNG 24 (165)
T ss_dssp EEEEECSTTSSHHHHHHHHTT
T ss_pred EEEEECCCCCCHHHHHHHHCC
T ss_conf 999999999899999999808
No 210
>d1u94a1 c.37.1.11 (A:6-268) RecA protein, ATPase-domain {Escherichia coli [TaxId: 562]}
Probab=95.46 E-value=0.022 Score=29.96 Aligned_cols=38 Identities=18% Similarity=0.199 Sum_probs=27.0
Q ss_pred CCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEC
Q ss_conf 999807888999719999999999975599999889966999865
Q 005511 62 TKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDM 106 (693)
Q Consensus 62 ~~~~ilL~GppGtGKT~la~~la~~l~~~~~~~~~~~~~~~~~~~ 106 (693)
...-..++||||+|||+++..++...... +..+++++.
T Consensus 53 ~g~itei~G~~gsGKTtl~l~~~~~~q~~-------g~~~vyidt 90 (263)
T d1u94a1 53 MGRIVEIYGPESSGKTTLTLQVIAAAQRE-------GKTCAFIDA 90 (263)
T ss_dssp TTSEEEEECSTTSSHHHHHHHHHHHHHHT-------TCCEEEEES
T ss_pred CCEEEEEECCCCCHHHHHHHHHHHHHHCC-------CCEEEEECC
T ss_conf 73589980577747899999999998708-------987999865
No 211
>d1m7ga_ c.37.1.4 (A:) Adenosine-5'phosphosulfate kinase (APS kinase) {Fungus (Penicillium chrysogenum) [TaxId: 5076]}
Probab=95.41 E-value=0.0074 Score=33.18 Aligned_cols=51 Identities=18% Similarity=0.148 Sum_probs=35.0
Q ss_pred HHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCC
Q ss_conf 999970399998078889997199999999999755999998899669998652101
Q 005511 54 VVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLV 110 (693)
Q Consensus 54 l~~~l~~~~~~~ilL~GppGtGKT~la~~la~~l~~~~~~~~~~~~~~~~~~~~~~~ 110 (693)
.+.......+.-+.|+|.||+||||+|+.+++.+... .+..++.++...+.
T Consensus 15 ~r~~~~~~kg~vIwltGlsGsGKTTia~~L~~~l~~~------~~~~~~~ldgD~iR 65 (208)
T d1m7ga_ 15 ERTELRNQRGLTIWLTGLSASGKSTLAVELEHQLVRD------RRVHAYRLDGDNIR 65 (208)
T ss_dssp HHHHHHTSSCEEEEEECSTTSSHHHHHHHHHHHHHHH------HCCCEEEECHHHHT
T ss_pred HHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHH------CCCEEEEECCHHHH
T ss_conf 9999858998699998999999899999999887774------27508997536788
No 212
>d3dhwc1 c.37.1.12 (C:1-240) Methionine import ATP-binding protein MetN {Escherichia coli [TaxId: 562]}
Probab=95.40 E-value=0.028 Score=29.17 Aligned_cols=23 Identities=26% Similarity=0.408 Sum_probs=20.4
Q ss_pred EEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 89995158892799999999996
Q 005511 408 SFIFSGPTGVGKSELAKALAAYY 430 (693)
Q Consensus 408 ~ill~Gp~GtGKt~lA~~la~~l 430 (693)
.+.+.||+|+|||++.++++...
T Consensus 33 ~~~iiG~sGsGKSTLl~~i~Gl~ 55 (240)
T d3dhwc1 33 IYGVIGASGAGKSTLIRCVNLLE 55 (240)
T ss_dssp EEEEEESTTSSHHHHHHHHTTSS
T ss_pred EEEEECCCCCCHHHHHHHHCCCC
T ss_conf 99998999898889999875886
No 213
>d1wp9a1 c.37.1.19 (A:1-200) putative ATP-dependent RNA helicase PF2015 {Pyrococcus furiosus [TaxId: 2261]}
Probab=95.38 E-value=0.058 Score=27.01 Aligned_cols=22 Identities=36% Similarity=0.427 Sum_probs=10.8
Q ss_pred CCEEEECCCCCHHHHHHHHHHH
Q ss_conf 9807888999719999999999
Q 005511 64 NNPCLIGEPGVGKTAIAEGLAQ 85 (693)
Q Consensus 64 ~~ilL~GppGtGKT~la~~la~ 85 (693)
.++|+.+|+|+|||.++-.++.
T Consensus 24 ~n~lv~~pTGsGKT~i~~~~~~ 45 (200)
T d1wp9a1 24 TNCLIVLPTGLGKTLIAMMIAE 45 (200)
T ss_dssp SCEEEECCTTSCHHHHHHHHHH
T ss_pred CCEEEEECCCCCHHHHHHHHHH
T ss_conf 9969991899728899999999
No 214
>d2onka1 c.37.1.12 (A:1-240) Molybdate/tungstate import ATP-binding protein WtpC (ModC) {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=95.38 E-value=0.0096 Score=32.40 Aligned_cols=23 Identities=30% Similarity=0.443 Sum_probs=17.1
Q ss_pred CEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 80788899971999999999997
Q 005511 65 NPCLIGEPGVGKTAIAEGLAQRI 87 (693)
Q Consensus 65 ~ilL~GppGtGKT~la~~la~~l 87 (693)
-+.|.||.|+||||+.+.++..+
T Consensus 26 ~~~liGpnGaGKSTll~~i~Gl~ 48 (240)
T d2onka1 26 YCVLLGPTGAGKSVFLELIAGIV 48 (240)
T ss_dssp EEEEECCTTSSHHHHHHHHHTSS
T ss_pred EEEEECCCCCHHHHHHHHHHCCC
T ss_conf 99999799980999999997399
No 215
>d1zd9a1 c.37.1.8 (A:18-181) ADP-ribosylation factor {Human (Homo sapiens), ARL8A [TaxId: 9606]}
Probab=95.29 E-value=0.056 Score=27.09 Aligned_cols=20 Identities=20% Similarity=0.371 Sum_probs=10.9
Q ss_pred EEEECCCCCCHHHHHHHHHH
Q ss_conf 99951588927999999999
Q 005511 409 FIFSGPTGVGKSELAKALAA 428 (693)
Q Consensus 409 ill~Gp~GtGKt~lA~~la~ 428 (693)
++|.|++|+|||++...+..
T Consensus 5 i~i~G~~~~GKTsLl~~l~~ 24 (164)
T d1zd9a1 5 LTLVGLQYSGKTTFVNVIAS 24 (164)
T ss_dssp EEEECSTTSSHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHC
T ss_conf 99999999898999999971
No 216
>d1g2912 c.37.1.12 (1:1-240) Maltose transport protein MalK, N-terminal domain {Archaeon Thermococcus litoralis [TaxId: 2265]}
Probab=95.24 E-value=0.021 Score=30.05 Aligned_cols=23 Identities=30% Similarity=0.562 Sum_probs=20.8
Q ss_pred EEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 89995158892799999999996
Q 005511 408 SFIFSGPTGVGKSELAKALAAYY 430 (693)
Q Consensus 408 ~ill~Gp~GtGKt~lA~~la~~l 430 (693)
.+-+.||+|+|||++.++++...
T Consensus 31 ~~~liG~sGaGKSTll~~i~gl~ 53 (240)
T d1g2912 31 FMILLGPSGCGKTTTLRMIAGLE 53 (240)
T ss_dssp EEEEECSTTSSHHHHHHHHHTSS
T ss_pred EEEEECCCCCHHHHHHHHHHCCC
T ss_conf 99999999980999999996487
No 217
>d2fz4a1 c.37.1.19 (A:24-229) DNA repair protein RAD25 {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=95.23 E-value=0.065 Score=26.69 Aligned_cols=42 Identities=21% Similarity=0.283 Sum_probs=32.0
Q ss_pred CCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 766888999999999703999980788899971999999999997
Q 005511 43 PVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRI 87 (693)
Q Consensus 43 ~ivG~~~~~~~l~~~l~~~~~~~ilL~GppGtGKT~la~~la~~l 87 (693)
.+--++.|.+.+..++.. .+.++..|+|+|||.++-.++.++
T Consensus 68 ~~~Lr~yQ~eav~~~~~~---~~~ll~~~tG~GKT~~a~~~~~~~ 109 (206)
T d2fz4a1 68 EISLRDYQEKALERWLVD---KRGCIVLPTGSGKTHVAMAAINEL 109 (206)
T ss_dssp CCCCCHHHHHHHHHHTTT---SEEEEEESSSTTHHHHHHHHHHHS
T ss_pred CCCCCHHHHHHHHHHHHC---CCCEEEECCCCCCEEHHHHHHHHH
T ss_conf 998499999999999967---990999578998264377678774
No 218
>d2eyqa3 c.37.1.19 (A:546-778) Transcription-repair coupling factor, TRCF {Escherichia coli [TaxId: 562]}
Probab=95.22 E-value=0.065 Score=26.67 Aligned_cols=130 Identities=13% Similarity=0.176 Sum_probs=67.2
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCCH---HHHHHHCCC
Q ss_conf 38999999999999750278999984389995158892799999999996399754055335432210---001100289
Q 005511 381 QDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMER---HTVSKLIGS 457 (693)
Q Consensus 381 q~~~i~~l~~~i~~~~~~~~~~~~~~~~ill~Gp~GtGKt~lA~~la~~l~~~~~~~~~~~~~~~~~~---~~~~~l~g~ 457 (693)
|..+++.+...+.... |. ..|+.|.+|+|||.++-..+......+...+.+-....... ......++.
T Consensus 60 Q~~~~~~i~~~~~~~~--------~~-~~LL~GdvGsGKT~V~~~a~~~~~~~g~qv~~l~Pt~~La~Q~~~~~~~~~~~ 130 (233)
T d2eyqa3 60 QAQAINAVLSDMCQPL--------AM-DRLVCGDVGFGKTEVAMRAAFLAVDNHKQVAVLVPTTLLAQQHYDNFRDRFAN 130 (233)
T ss_dssp HHHHHHHHHHHHHSSS--------CC-EEEEECCCCTTTHHHHHHHHHHHHTTTCEEEEECSSHHHHHHHHHHHHHHSTT
T ss_pred HHHHHHHHHHHHHCCC--------CC-CEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHH
T ss_conf 8889999999985457--------66-70898388877289999999999976895699746887679999999998724
Q ss_pred CCC----CCCCCC---CCHHHH---------------HHH----CCCCEEEEECCCCCCCHHHHHHHHHHHHCCEEECCC
Q ss_conf 998----767675---122669---------------998----099989998467422988999999974056463799
Q 005511 458 PPG----YVGYTE---GGQLTE---------------AVR----RRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSK 511 (693)
Q Consensus 458 ~~~----~~g~~~---~~~l~~---------------~~~----~~~~~vl~iDEid~l~~~~~~~Ll~~le~g~~~~~~ 511 (693)
... +.+... ...+.. ++. -..-+++++||=++..-...+.+.....+-
T Consensus 131 ~~~~v~~l~~~~~~~~~~~~~~~~~~g~~~iviGths~l~~~~~f~~LgLiIiDEeH~fg~kQ~~~l~~~~~~~------ 204 (233)
T d2eyqa3 131 WPVRIEMISRFRSAKEQTQILAEVAEGKIDILIGTHKLLQSDVKFKDLGLLIVDEEHRFGVRHKERIKAMRANV------ 204 (233)
T ss_dssp TTCCEEEESTTSCHHHHHHHHHHHHTTCCSEEEECTHHHHSCCCCSSEEEEEEESGGGSCHHHHHHHHHHHTTS------
T ss_pred CCCEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEEHHHHCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHCCCC------
T ss_conf 79779763576531269999999967997889742023306776555463022231233257899999618899------
Q ss_pred CCEEECCCEEEEEECCCCHHHH
Q ss_conf 9833169769999538882566
Q 005511 512 GRTVDFKNTLLIMTSNVGSSVI 533 (693)
Q Consensus 512 ~~~~~~~~~i~I~tsn~~~~~i 533 (693)
-++.++.++....+
T Consensus 205 --------~~l~~SATPiprtl 218 (233)
T d2eyqa3 205 --------DILTLTATPIPRTL 218 (233)
T ss_dssp --------EEEEEESSCCCHHH
T ss_pred --------CEEEEECCHHHHHH
T ss_conf --------88999655109999
No 219
>d1tf7a2 c.37.1.11 (A:256-497) Circadian clock protein KaiC {Synechococcus sp. strain PCC 7942 (Anacystis nidulans R2) [TaxId: 1140]}
Probab=95.12 E-value=0.017 Score=30.68 Aligned_cols=36 Identities=22% Similarity=0.329 Sum_probs=28.3
Q ss_pred EEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEECCC
Q ss_conf 899951588927999999999963997540553354
Q 005511 408 SFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMS 443 (693)
Q Consensus 408 ~ill~Gp~GtGKt~lA~~la~~l~~~~~~~~~~~~~ 443 (693)
.++++||||+|||+++..++......+.++..+.+.
T Consensus 28 l~li~G~pGsGKT~l~~qia~~~~~~~~~~~~is~e 63 (242)
T d1tf7a2 28 IILATGATGTGKTLLVSRFVENACANKERAILFAYE 63 (242)
T ss_dssp EEEEEECTTSSHHHHHHHHHHHHHTTTCCEEEEESS
T ss_pred EEEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEECC
T ss_conf 999991899999999999999998723244112126
No 220
>d1pjra1 c.37.1.19 (A:1-318) DEXX box DNA helicase {Bacillus stearothermophilus, PcrA [TaxId: 1422]}
Probab=95.02 E-value=0.021 Score=30.04 Aligned_cols=41 Identities=20% Similarity=0.333 Sum_probs=25.3
Q ss_pred CCCCEEEECCCCCHHHH-HHHHHHHHHHCCCCCCCCCCCEEEEEEC
Q ss_conf 99980788899971999-9999999975599999889966999865
Q 005511 62 TKNNPCLIGEPGVGKTA-IAEGLAQRIASGDVPDTIEGKKVITLDM 106 (693)
Q Consensus 62 ~~~~ilL~GppGtGKT~-la~~la~~l~~~~~~~~~~~~~~~~~~~ 106 (693)
...++++.|+||||||+ +++.+++.+..+..+ ..++..+..
T Consensus 23 ~~g~~lV~g~aGSGKTt~l~~ri~~ll~~~~~~----p~~il~lt~ 64 (318)
T d1pjra1 23 TEGPLLIMAGAGSGKTRVLTHRIAYLMAEKHVA----PWNILAITF 64 (318)
T ss_dssp CSSCEEEEECTTSCHHHHHHHHHHHHHHTTCCC----GGGEEEEES
T ss_pred CCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCC----HHHEEEEEC
T ss_conf 999989995298668999999999999808998----789375766
No 221
>d1uj2a_ c.37.1.6 (A:) Uridine-cytidine kinase 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.01 E-value=0.008 Score=32.95 Aligned_cols=22 Identities=27% Similarity=0.338 Sum_probs=12.6
Q ss_pred EEEECCCCCCHHHHHHHHHHHH
Q ss_conf 9995158892799999999996
Q 005511 409 FIFSGPTGVGKSELAKALAAYY 430 (693)
Q Consensus 409 ill~Gp~GtGKt~lA~~la~~l 430 (693)
+-+.||+|+|||++|+.|++.+
T Consensus 5 IgI~G~~gSGKSTla~~L~~~l 26 (213)
T d1uj2a_ 5 IGVSGGTASGKSSVCAKIVQLL 26 (213)
T ss_dssp EEEECSTTSSHHHHHHHHHHHT
T ss_pred EEEECCCCCCHHHHHHHHHHHH
T ss_conf 9998999787999999999996
No 222
>d1kaoa_ c.37.1.8 (A:) Rap2a {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.94 E-value=0.078 Score=26.14 Aligned_cols=20 Identities=30% Similarity=0.572 Sum_probs=12.7
Q ss_pred EEEECCCCCHHHHHHHHHHH
Q ss_conf 07888999719999999999
Q 005511 66 PCLIGEPGVGKTAIAEGLAQ 85 (693)
Q Consensus 66 ilL~GppGtGKT~la~~la~ 85 (693)
+++.|++|+|||+|++.+..
T Consensus 6 i~lvG~~~vGKTsLi~r~~~ 25 (167)
T d1kaoa_ 6 VVVLGSGGVGKSALTVQFVT 25 (167)
T ss_dssp EEEECCTTSSHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHH
T ss_conf 99999899399999999971
No 223
>d2hyda1 c.37.1.12 (A:324-578) Putative multidrug export ATP-binding/permease protein SAV1866 {Staphylococcus aureus [TaxId: 1280]}
Probab=94.90 E-value=0.049 Score=27.52 Aligned_cols=23 Identities=35% Similarity=0.665 Sum_probs=20.4
Q ss_pred EEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 89995158892799999999996
Q 005511 408 SFIFSGPTGVGKSELAKALAAYY 430 (693)
Q Consensus 408 ~ill~Gp~GtGKt~lA~~la~~l 430 (693)
.+.+.||+|+|||++++.++..+
T Consensus 46 ~vaivG~sGsGKSTLl~ll~gl~ 68 (255)
T d2hyda1 46 TVAFVGMSGGGKSTLINLIPRFY 68 (255)
T ss_dssp EEEEECSTTSSHHHHHTTTTTSS
T ss_pred EEEEECCCCCCHHHHHHHHHHCC
T ss_conf 99998899980999999997127
No 224
>d2gj8a1 c.37.1.8 (A:216-376) Probable tRNA modification GTPase TrmE (MnmE), G domain {Escherichia coli [TaxId: 562]}
Probab=94.88 E-value=0.078 Score=26.14 Aligned_cols=22 Identities=32% Similarity=0.631 Sum_probs=17.7
Q ss_pred CEEEECCCCCHHHHHHHHHHHH
Q ss_conf 8078889997199999999999
Q 005511 65 NPCLIGEPGVGKTAIAEGLAQR 86 (693)
Q Consensus 65 ~ilL~GppGtGKT~la~~la~~ 86 (693)
.+++.|+||+|||+|.+++...
T Consensus 3 kI~lvG~~nvGKSsLin~l~~~ 24 (161)
T d2gj8a1 3 KVVIAGRPNAGKSSLLNALAGR 24 (161)
T ss_dssp EEEEEESTTSSHHHHHHHHHTS
T ss_pred EEEEECCCCCCHHHHHHHHHCC
T ss_conf 9999899999899999999688
No 225
>d2bmfa2 c.37.1.14 (A:178-482) Dengue virus helicase {Dengue virus type 2 [TaxId: 11060]}
Probab=94.87 E-value=0.031 Score=28.86 Aligned_cols=25 Identities=24% Similarity=0.317 Sum_probs=17.1
Q ss_pred CCCCEEEECCCCCHHHH-HHHHHHHH
Q ss_conf 99980788899971999-99999999
Q 005511 62 TKNNPCLIGEPGVGKTA-IAEGLAQR 86 (693)
Q Consensus 62 ~~~~ilL~GppGtGKT~-la~~la~~ 86 (693)
+.+++++.+|+|+|||+ +.-++.+.
T Consensus 8 ~~~~~lv~~~TGsGKT~~~l~~~~~~ 33 (305)
T d2bmfa2 8 KKRLTIMDLHPGAGKTKRYLPAIVRE 33 (305)
T ss_dssp TTCEEEECCCTTSSTTTTHHHHHHHH
T ss_pred CCCCEEEEECCCCCHHHHHHHHHHHH
T ss_conf 69949999799997879999999999
No 226
>d2p6ra3 c.37.1.19 (A:1-202) Hel308 helicase {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=94.85 E-value=0.068 Score=26.53 Aligned_cols=51 Identities=20% Similarity=0.262 Sum_probs=29.2
Q ss_pred HHHHHHCCCCCCC-CCCHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHH-HHHHHH
Q ss_conf 6654320999876-68889999999997039999807888999719999999-999975
Q 005511 32 LTKLAEEGKLDPV-VGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEG-LAQRIA 88 (693)
Q Consensus 32 l~~~~~~~~~~~i-vG~~~~~~~l~~~l~~~~~~~ilL~GppGtGKT~la~~-la~~l~ 88 (693)
+........++.+ -.|.+.+..+. ...++++.+|+|+|||+++.. +...+.
T Consensus 14 ~~~~l~~~g~~~l~~~Q~~ai~~l~------~~~~~il~apTGsGKT~~a~l~i~~~~~ 66 (202)
T d2p6ra3 14 AVGILKEEGIEELFPPQAEAVEKVF------SGKNLLLAMPTAAGKTLLAEMAMVREAI 66 (202)
T ss_dssp HHHHHHCC---CCCCCCHHHHHHHT------TCSCEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCCCCCHHHHHHHHHHH------CCCCEEEECCCCCCHHHHHHHHHHHHHH
T ss_conf 9999998699999999999999998------4999899868998511789999998762
No 227
>d1gm5a3 c.37.1.19 (A:286-549) RecG helicase domain {Thermotoga maritima [TaxId: 2336]}
Probab=94.83 E-value=0.083 Score=25.95 Aligned_cols=15 Identities=20% Similarity=0.246 Sum_probs=9.0
Q ss_pred CCEEEEECCCCCCCH
Q ss_conf 998999846742298
Q 005511 478 PYTVVLFDEIEKAHP 492 (693)
Q Consensus 478 ~~~vl~iDEid~l~~ 492 (693)
.-+++++||=++..-
T Consensus 205 ~LglviiDEqH~fgv 219 (264)
T d1gm5a3 205 NLGLVIIDEQHRFGV 219 (264)
T ss_dssp CCCEEEEESCCCC--
T ss_pred CCCEEEECCCCCCCH
T ss_conf 562256324210024
No 228
>d1znwa1 c.37.1.1 (A:20-201) Guanylate kinase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=94.82 E-value=0.01 Score=32.24 Aligned_cols=25 Identities=32% Similarity=0.488 Sum_probs=19.6
Q ss_pred CCEEEECCCCCHHHHHHHHHHHHHH
Q ss_conf 9807888999719999999999975
Q 005511 64 NNPCLIGEPGVGKTAIAEGLAQRIA 88 (693)
Q Consensus 64 ~~ilL~GppGtGKT~la~~la~~l~ 88 (693)
.-++|.||+|+||||+++.+.+...
T Consensus 3 ~iivl~GpsG~GK~tl~~~L~~~~~ 27 (182)
T d1znwa1 3 RVVVLSGPSAVGKSTVVRCLRERIP 27 (182)
T ss_dssp CEEEEECSTTSSHHHHHHHHHHHST
T ss_pred EEEEEECCCCCCHHHHHHHHHHHCC
T ss_conf 4999989999999999999984589
No 229
>d1zj6a1 c.37.1.8 (A:2-178) ADP-ribosylation factor {Human (Homo sapiens), ARL5A [TaxId: 9606]}
Probab=94.75 E-value=0.024 Score=29.62 Aligned_cols=23 Identities=17% Similarity=0.287 Sum_probs=18.3
Q ss_pred EEEEEECCCCCCHHHHHHHHHHH
Q ss_conf 38999515889279999999999
Q 005511 407 ASFIFSGPTGVGKSELAKALAAY 429 (693)
Q Consensus 407 ~~ill~Gp~GtGKt~lA~~la~~ 429 (693)
.-+++.|.+|+|||++...+...
T Consensus 16 ~kI~vvG~~~~GKSsLi~rl~~~ 38 (177)
T d1zj6a1 16 HKVIIVGLDNAGKTTILYQFSMN 38 (177)
T ss_dssp EEEEEEESTTSSHHHHHHHHHTT
T ss_pred EEEEEECCCCCCHHHHHHHHHCC
T ss_conf 79999999998989999999668
No 230
>d1uj2a_ c.37.1.6 (A:) Uridine-cytidine kinase 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.72 E-value=0.012 Score=31.66 Aligned_cols=26 Identities=15% Similarity=0.331 Sum_probs=21.8
Q ss_pred EEEECCCCCHHHHHHHHHHHHHHCCC
Q ss_conf 07888999719999999999975599
Q 005511 66 PCLIGEPGVGKTAIAEGLAQRIASGD 91 (693)
Q Consensus 66 ilL~GppGtGKT~la~~la~~l~~~~ 91 (693)
+-+.||+|+||||+++.+++.+....
T Consensus 5 IgI~G~~gSGKSTla~~L~~~l~~~~ 30 (213)
T d1uj2a_ 5 IGVSGGTASGKSSVCAKIVQLLGQNE 30 (213)
T ss_dssp EEEECSTTSSHHHHHHHHHHHTTGGG
T ss_pred EEEECCCCCCHHHHHHHHHHHHCHHC
T ss_conf 99989997879999999999964101
No 231
>d1mo6a1 c.37.1.11 (A:1-269) RecA protein, ATPase-domain {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=94.72 E-value=0.051 Score=27.40 Aligned_cols=40 Identities=18% Similarity=0.149 Sum_probs=27.9
Q ss_pred CCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECC
Q ss_conf 99998078889997199999999999755999998899669998652
Q 005511 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMG 107 (693)
Q Consensus 61 ~~~~~ilL~GppGtGKT~la~~la~~l~~~~~~~~~~~~~~~~~~~~ 107 (693)
+...-..|+||||+|||+++..++..... .+..+++++..
T Consensus 58 ~~g~i~e~~G~~~~GKT~l~l~~~~~~q~-------~g~~~vyIDtE 97 (269)
T d1mo6a1 58 PRGRVIEIYGPESSGKTTVALHAVANAQA-------AGGVAAFIDAE 97 (269)
T ss_dssp CSSSEEEEECSSSSSHHHHHHHHHHHHHH-------TTCEEEEEESS
T ss_pred CCCEEEEEECCCCCHHHHHHHHHHHHHHC-------CCCEEEEEECC
T ss_conf 66336999648874889999999998754-------89889999897
No 232
>d1nrjb_ c.37.1.8 (B:) Signal recognition particle receptor beta-subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=94.62 E-value=0.026 Score=29.43 Aligned_cols=24 Identities=21% Similarity=0.278 Sum_probs=19.2
Q ss_pred CCCEEEECCCCCHHHHHHHHHHHH
Q ss_conf 998078889997199999999999
Q 005511 63 KNNPCLIGEPGVGKTAIAEGLAQR 86 (693)
Q Consensus 63 ~~~ilL~GppGtGKT~la~~la~~ 86 (693)
.+.++|.|+||+|||+|.+++...
T Consensus 3 ~p~V~lvG~~n~GKTSLln~l~~~ 26 (209)
T d1nrjb_ 3 QPSIIIAGPQNSGKTSLLTLLTTD 26 (209)
T ss_dssp CCEEEEECSTTSSHHHHHHHHHHS
T ss_pred CCEEEEECCCCCCHHHHHHHHHCC
T ss_conf 889999999998899999999679
No 233
>d1lvga_ c.37.1.1 (A:) Guanylate kinase {Mouse (Mus musculus) [TaxId: 10090]}
Probab=94.61 E-value=0.012 Score=31.73 Aligned_cols=22 Identities=45% Similarity=0.665 Sum_probs=20.6
Q ss_pred EEEECCCCCCHHHHHHHHHHHH
Q ss_conf 9995158892799999999996
Q 005511 409 FIFSGPTGVGKSELAKALAAYY 430 (693)
Q Consensus 409 ill~Gp~GtGKt~lA~~la~~l 430 (693)
+++.||+|+||+++++.|++..
T Consensus 3 Ivl~GPsGsGK~tl~~~L~~~~ 24 (190)
T d1lvga_ 3 VVLSGPSGAGKSTLLKKLFQEH 24 (190)
T ss_dssp EEEECCTTSSHHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHC
T ss_conf 9999999999999999999748
No 234
>d1u8za_ c.37.1.8 (A:) Ras-related protein RalA {Cotton-top tamarin (Saguinus oedipus) [TaxId: 9490]}
Probab=94.42 E-value=0.088 Score=25.75 Aligned_cols=20 Identities=30% Similarity=0.519 Sum_probs=12.4
Q ss_pred EEEECCCCCHHHHHHHHHHH
Q ss_conf 07888999719999999999
Q 005511 66 PCLIGEPGVGKTAIAEGLAQ 85 (693)
Q Consensus 66 ilL~GppGtGKT~la~~la~ 85 (693)
+++.|.+|+|||++++.+..
T Consensus 7 ivlvG~~~vGKTsli~~~~~ 26 (168)
T d1u8za_ 7 VIMVGSGGVGKSALTLQFMY 26 (168)
T ss_dssp EEEECSTTSSHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHH
T ss_conf 99999899588999999972
No 235
>d1nn5a_ c.37.1.1 (A:) Thymidylate kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.35 E-value=0.028 Score=29.19 Aligned_cols=24 Identities=21% Similarity=0.304 Sum_probs=13.3
Q ss_pred EEEECCCCCHHHHHHHHHHHHHHC
Q ss_conf 078889997199999999999755
Q 005511 66 PCLIGEPGVGKTAIAEGLAQRIAS 89 (693)
Q Consensus 66 ilL~GppGtGKT~la~~la~~l~~ 89 (693)
|.|.|+.|+||||+++.+++.+.+
T Consensus 6 I~ieG~dGsGKsT~~~~L~~~L~~ 29 (209)
T d1nn5a_ 6 IVLEGVDRAGKSTQSRKLVEALCA 29 (209)
T ss_dssp EEEEESTTSSHHHHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHHHH
T ss_conf 999899888999999999999987
No 236
>d1xp8a1 c.37.1.11 (A:15-282) RecA protein, ATPase-domain {Deinococcus radiodurans [TaxId: 1299]}
Probab=94.34 E-value=0.053 Score=27.29 Aligned_cols=47 Identities=19% Similarity=0.225 Sum_probs=31.4
Q ss_pred HHHHHH-C--CCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECC
Q ss_conf 999970-3--99998078889997199999999999755999998899669998652
Q 005511 54 VVQILG-R--RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMG 107 (693)
Q Consensus 54 l~~~l~-~--~~~~~ilL~GppGtGKT~la~~la~~l~~~~~~~~~~~~~~~~~~~~ 107 (693)
|-.++. . +...-..++||+|+|||+++..++...... +..+++++..
T Consensus 45 lD~~Lg~GGip~g~itei~G~~~sGKT~l~l~~~~~aqk~-------g~~v~yiDtE 94 (268)
T d1xp8a1 45 LDLALGVGGIPRGRITEIYGPESGGKTTLALAIVAQAQKA-------GGTCAFIDAE 94 (268)
T ss_dssp HHHHTSSSSEETTSEEEEEESTTSSHHHHHHHHHHHHHHT-------TCCEEEEESS
T ss_pred HHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHC-------CCEEEEEECC
T ss_conf 9997567986675478980587652279999999999707-------9989999887
No 237
>d1gkya_ c.37.1.1 (A:) Guanylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=94.33 E-value=0.016 Score=30.96 Aligned_cols=22 Identities=55% Similarity=0.853 Sum_probs=20.7
Q ss_pred EEEECCCCCCHHHHHHHHHHHH
Q ss_conf 9995158892799999999996
Q 005511 409 FIFSGPTGVGKSELAKALAAYY 430 (693)
Q Consensus 409 ill~Gp~GtGKt~lA~~la~~l 430 (693)
++|.||+|+||+++++.|++..
T Consensus 4 Ivl~GpsG~GK~tl~~~L~~~~ 25 (186)
T d1gkya_ 4 IVISGPSGTGKSTLLKKLFAEY 25 (186)
T ss_dssp EEEECCTTSSHHHHHHHHHHHC
T ss_pred EEEECCCCCCHHHHHHHHHHHC
T ss_conf 9998999999899999999748
No 238
>d1kgda_ c.37.1.1 (A:) Guanylate kinase-like domain of Cask {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.32 E-value=0.019 Score=30.43 Aligned_cols=23 Identities=30% Similarity=0.521 Sum_probs=11.2
Q ss_pred CEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 80788899971999999999997
Q 005511 65 NPCLIGEPGVGKTAIAEGLAQRI 87 (693)
Q Consensus 65 ~ilL~GppGtGKT~la~~la~~l 87 (693)
.++|.||+|+||+++++.+.+..
T Consensus 5 ~ivl~Gpsg~GK~tl~~~L~~~~ 27 (178)
T d1kgda_ 5 TLVLLGAHGVGRRHIKNTLITKH 27 (178)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHC
T ss_pred CEEEECCCCCCHHHHHHHHHHHC
T ss_conf 19999989999999999999709
No 239
>d1yrba1 c.37.1.10 (A:1-244) ATP(GTP)-binding protein PAB0955 {Pyrococcus abyssi [TaxId: 29292]}
Probab=94.25 E-value=0.033 Score=28.73 Aligned_cols=24 Identities=21% Similarity=0.499 Sum_probs=20.5
Q ss_pred EEEECCCCCHHHHHHHHHHHHHHC
Q ss_conf 078889997199999999999755
Q 005511 66 PCLIGEPGVGKTAIAEGLAQRIAS 89 (693)
Q Consensus 66 ilL~GppGtGKT~la~~la~~l~~ 89 (693)
+++.||+|+||||+.+++.+.+..
T Consensus 3 i~v~G~~GsGKTTLl~~ll~~~~~ 26 (244)
T d1yrba1 3 VVFVGTAGSGKTTLTGEFGRYLED 26 (244)
T ss_dssp EEEECSTTSSHHHHHHHHHHHHTT
T ss_pred EEEECCCCCCHHHHHHHHHHHHHH
T ss_conf 999918998399999999998843
No 240
>d2gjsa1 c.37.1.8 (A:91-258) Rad {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.24 E-value=0.042 Score=27.99 Aligned_cols=20 Identities=45% Similarity=0.733 Sum_probs=12.6
Q ss_pred EEEECCCCCHHHHHHHHHHH
Q ss_conf 07888999719999999999
Q 005511 66 PCLIGEPGVGKTAIAEGLAQ 85 (693)
Q Consensus 66 ilL~GppGtGKT~la~~la~ 85 (693)
+++.|++|+|||++++.+..
T Consensus 4 i~lvG~~~vGKTsLi~~~~~ 23 (168)
T d2gjsa1 4 VLLLGAPGVGKSALARIFGG 23 (168)
T ss_dssp EEEECCTTSSHHHHHHHHHT
T ss_pred EEEECCCCCCHHHHHHHHHC
T ss_conf 99989899399999999818
No 241
>d2eyqa3 c.37.1.19 (A:546-778) Transcription-repair coupling factor, TRCF {Escherichia coli [TaxId: 562]}
Probab=94.23 E-value=0.11 Score=25.04 Aligned_cols=62 Identities=19% Similarity=0.193 Sum_probs=45.9
Q ss_pred CCCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCC
Q ss_conf 998766888999999999703999980788899971999999999997559999988996699986521
Q 005511 40 KLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGL 108 (693)
Q Consensus 40 ~~~~ivG~~~~~~~l~~~l~~~~~~~ilL~GppGtGKT~la~~la~~l~~~~~~~~~~~~~~~~~~~~~ 108 (693)
.+..--.|..+++.+.+.+..+.+.+.||+|.+|+|||.++-..+..... .+..++.+-...
T Consensus 53 P~~lt~~Q~~~~~~i~~~~~~~~~~~~LL~GdvGsGKT~V~~~a~~~~~~-------~g~qv~~l~Pt~ 114 (233)
T d2eyqa3 53 PFETTPDQAQAINAVLSDMCQPLAMDRLVCGDVGFGKTEVAMRAAFLAVD-------NHKQVAVLVPTT 114 (233)
T ss_dssp CSCCCHHHHHHHHHHHHHHHSSSCCEEEEECCCCTTTHHHHHHHHHHHHT-------TTCEEEEECSSH
T ss_pred CCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHH-------CCCCEEEECCHH
T ss_conf 11346048889999999985457667089838887728999999999997-------689569974688
No 242
>d1pzna2 c.37.1.11 (A:96-349) DNA repair protein Rad51, catalytic domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=94.14 E-value=0.019 Score=30.38 Aligned_cols=21 Identities=38% Similarity=0.458 Sum_probs=9.8
Q ss_pred EEEECCCCCCHHHHHHHHHHH
Q ss_conf 999515889279999999999
Q 005511 409 FIFSGPTGVGKSELAKALAAY 429 (693)
Q Consensus 409 ill~Gp~GtGKt~lA~~la~~ 429 (693)
++++||||+|||+++.-++..
T Consensus 39 ~li~G~pGsGKT~~~lq~~~~ 59 (254)
T d1pzna2 39 TEVFGEFGSGKTQLAHTLAVM 59 (254)
T ss_dssp EEEEESTTSSHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHH
T ss_conf 999858989889999999998
No 243
>d2atva1 c.37.1.8 (A:5-172) Ras-like estrogen-regulated growth inhibitor, RERG {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.13 E-value=0.063 Score=26.76 Aligned_cols=21 Identities=29% Similarity=0.580 Sum_probs=15.0
Q ss_pred EEEECCCCCHHHHHHHHHHHH
Q ss_conf 078889997199999999999
Q 005511 66 PCLIGEPGVGKTAIAEGLAQR 86 (693)
Q Consensus 66 ilL~GppGtGKT~la~~la~~ 86 (693)
+++.|++|+|||+|++.+...
T Consensus 5 i~lvG~~~vGKTsli~r~~~~ 25 (168)
T d2atva1 5 LAIFGRAGVGKSALVVRFLTK 25 (168)
T ss_dssp EEEECCTTSSHHHHHHHHHHS
T ss_pred EEEECCCCCCHHHHHHHHHHC
T ss_conf 999998997899999999739
No 244
>d1s96a_ c.37.1.1 (A:) Guanylate kinase {Escherichia coli [TaxId: 562]}
Probab=94.06 E-value=0.019 Score=30.32 Aligned_cols=25 Identities=16% Similarity=0.262 Sum_probs=20.9
Q ss_pred CCEEEECCCCCHHHHHHHHHHHHHH
Q ss_conf 9807888999719999999999975
Q 005511 64 NNPCLIGEPGVGKTAIAEGLAQRIA 88 (693)
Q Consensus 64 ~~ilL~GppGtGKT~la~~la~~l~ 88 (693)
.-++|+||+|+|||++.+.+.+..+
T Consensus 3 ~livi~GPSG~GK~tl~~~L~~~~p 27 (205)
T d1s96a_ 3 TLYIVSAPSGAGKSSLIQALLKTQP 27 (205)
T ss_dssp CEEEEECCTTSCHHHHHHHHHHHSC
T ss_pred EEEEEECCCCCCHHHHHHHHHHHCC
T ss_conf 0999999999999999999986398
No 245
>d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}
Probab=94.05 E-value=0.065 Score=26.68 Aligned_cols=50 Identities=30% Similarity=0.412 Sum_probs=34.6
Q ss_pred HHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECC
Q ss_conf 999999970399998078889997199999999999755999998899669998652
Q 005511 51 IERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMG 107 (693)
Q Consensus 51 ~~~l~~~l~~~~~~~ilL~GppGtGKT~la~~la~~l~~~~~~~~~~~~~~~~~~~~ 107 (693)
+..+...+.+...+=++++|+-|+||||++-.+|..+.. .+.++..+++.
T Consensus 8 ~~~~~~~~~~~~~~iii~sGKGGVGKTT~a~nLA~~lA~-------~G~rVllvD~D 57 (279)
T d1ihua2 8 LSALVDDIARNEHGLIMLMGKGGVGKTTMAAAIAVRLAD-------MGFDVHLTTSD 57 (279)
T ss_dssp HHHHHHHHHTTSCEEEEEECSTTSSHHHHHHHHHHHHHH-------TTCCEEEEESC
T ss_pred HHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHH-------CCCCEEEEECC
T ss_conf 889998850379789999799988789999999999997-------89938999379
No 246
>d1v5wa_ c.37.1.11 (A:) Meiotic recombination protein DMC1/LIM15 homolog {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.01 E-value=0.018 Score=30.59 Aligned_cols=23 Identities=26% Similarity=0.245 Sum_probs=12.3
Q ss_pred CEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 80788899971999999999997
Q 005511 65 NPCLIGEPGVGKTAIAEGLAQRI 87 (693)
Q Consensus 65 ~ilL~GppGtGKT~la~~la~~l 87 (693)
-++++||||+|||+++..++...
T Consensus 39 ~~~i~G~~GsGKT~lalq~~~~~ 61 (258)
T d1v5wa_ 39 ITEAFGEFRTGKTQLSHTLCVTA 61 (258)
T ss_dssp EEEEECCTTCTHHHHHHHHHHHT
T ss_pred EEEEECCCCCCHHHHHHHHHHHH
T ss_conf 99998899887889999999999
No 247
>d1ji0a_ c.37.1.12 (A:) Branched chain aminoacid ABC transporter {Thermotoga maritima, TM1139 [TaxId: 2336]}
Probab=94.00 E-value=0.063 Score=26.75 Aligned_cols=27 Identities=30% Similarity=0.380 Sum_probs=19.8
Q ss_pred CCCCCEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 999980788899971999999999997
Q 005511 61 RTKNNPCLIGEPGVGKTAIAEGLAQRI 87 (693)
Q Consensus 61 ~~~~~ilL~GppGtGKT~la~~la~~l 87 (693)
.+..-+-|.||.|+||||+.+.++..+
T Consensus 30 ~~Gei~~liGpnGaGKSTl~~~i~Gl~ 56 (240)
T d1ji0a_ 30 PRGQIVTLIGANGAGKTTTLSAIAGLV 56 (240)
T ss_dssp ETTCEEEEECSTTSSHHHHHHHHTTSS
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHCCC
T ss_conf 899799999999985999999996788
No 248
>d1sq5a_ c.37.1.6 (A:) Pantothenate kinase PanK {Escherichia coli [TaxId: 562]}
Probab=93.98 E-value=0.048 Score=27.57 Aligned_cols=40 Identities=20% Similarity=0.238 Sum_probs=28.5
Q ss_pred EEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCC
Q ss_conf 078889997199999999999755999998899669998652101
Q 005511 66 PCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLV 110 (693)
Q Consensus 66 ilL~GppGtGKT~la~~la~~l~~~~~~~~~~~~~~~~~~~~~~~ 110 (693)
+-+.|++|+||||+|+.+...+.... .+.++..+++..+.
T Consensus 83 IGIaG~sgSGKSTla~~L~~lL~~~~-----~~~~v~~Is~D~F~ 122 (308)
T d1sq5a_ 83 ISIAGSVAVGKSTTARVLQALLSRWP-----EHRRVELITTDGFL 122 (308)
T ss_dssp EEEEECTTSSHHHHHHHHHHHHTTST-----TCCCEEEEEGGGGB
T ss_pred EEEECCCCCCCCHHHHHHHHHHHHHC-----CCCCEEEEEEEEEE
T ss_conf 99968999987689999999973046-----89965999521568
No 249
>d1n0wa_ c.37.1.11 (A:) DNA repair protein Rad51, catalytic domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.89 E-value=0.019 Score=30.42 Aligned_cols=25 Identities=32% Similarity=0.306 Sum_probs=14.2
Q ss_pred CCCEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 9980788899971999999999997
Q 005511 63 KNNPCLIGEPGVGKTAIAEGLAQRI 87 (693)
Q Consensus 63 ~~~ilL~GppGtGKT~la~~la~~l 87 (693)
..-++++||||+|||+++..++...
T Consensus 23 G~v~~i~G~~GsGKT~l~l~la~~~ 47 (242)
T d1n0wa_ 23 GSITEMFGEFRTGKTQICHTLAVTC 47 (242)
T ss_dssp TSEEEEECCTTSSHHHHHHHHHHHT
T ss_pred CEEEEEEECCCCCHHHHHHHHHHHH
T ss_conf 9799999589999999999999999
No 250
>d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]}
Probab=93.85 E-value=0.085 Score=25.85 Aligned_cols=72 Identities=21% Similarity=0.185 Sum_probs=50.0
Q ss_pred CCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHH--HHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHC
Q ss_conf 9999741888874366543209998766888999--99999970399998078889997199999999999755
Q 005511 18 SGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQI--ERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIAS 89 (693)
Q Consensus 18 ~~~~~~~l~~~~~~l~~~~~~~~~~~ivG~~~~~--~~l~~~l~~~~~~~ilL~GppGtGKT~la~~la~~l~~ 89 (693)
+-+|...++-|.....+.|+.....++.-+--.+ .....++.......+++.|.+|+|||..++.+.+.+..
T Consensus 76 avNPyk~l~ly~~~~~~~y~~~~~~~~pPHifaiA~~Ay~~m~~~~~~QsIiisGeSGaGKTe~~K~il~yL~~ 149 (794)
T d2mysa2 76 TVNPYKWLPVYNPKVVLAYRGKKRQEAPPHIFSISDNAYQFMLTDRENQSILITGESGAGKTVNTKRVIQYFAT 149 (794)
T ss_dssp EECCSSCCGGGCTTHHHHTTTCCTTSSCSCHHHHHHHHHHHHHHHTCCEEEEEEECTTSCHHHHHHHHHHHHHH
T ss_pred EECCCCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHH
T ss_conf 97899889999999999970898899998089999999999987499807999717988789999999999998
No 251
>d2erya1 c.37.1.8 (A:10-180) r-Ras2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.79 E-value=0.069 Score=26.49 Aligned_cols=20 Identities=35% Similarity=0.569 Sum_probs=13.6
Q ss_pred EEEECCCCCHHHHHHHHHHH
Q ss_conf 07888999719999999999
Q 005511 66 PCLIGEPGVGKTAIAEGLAQ 85 (693)
Q Consensus 66 ilL~GppGtGKT~la~~la~ 85 (693)
+++.|.+|+|||+|++.+..
T Consensus 8 i~lvG~~~vGKTsLi~r~~~ 27 (171)
T d2erya1 8 LVVVGGGGVGKSALTIQFIQ 27 (171)
T ss_dssp EEEEECTTSSHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHH
T ss_conf 99999999799999999973
No 252
>d1ihua1 c.37.1.10 (A:1-296) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}
Probab=93.74 E-value=0.059 Score=26.97 Aligned_cols=29 Identities=34% Similarity=0.422 Sum_probs=24.1
Q ss_pred CCCCCEEEECCCCCHHHHHHHHHHHHHHC
Q ss_conf 99998078889997199999999999755
Q 005511 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIAS 89 (693)
Q Consensus 61 ~~~~~ilL~GppGtGKT~la~~la~~l~~ 89 (693)
..++-++++|+-|+||||++-++|..+..
T Consensus 6 ~~p~~i~~sGKGGVGKTTvaa~lA~~lA~ 34 (296)
T d1ihua1 6 NIPPYLFFTGKGGVGKTSISCATAIRLAE 34 (296)
T ss_dssp SCCSEEEEECSTTSSHHHHHHHHHHHHHH
T ss_pred CCCEEEEEECCCCCHHHHHHHHHHHHHHH
T ss_conf 89859999799867499999999999997
No 253
>d1d0xa2 c.37.1.9 (A:2-33,A:80-759) Myosin S1, motor domain {Dictyostelium discoideum [TaxId: 44689]}
Probab=93.72 E-value=0.053 Score=27.27 Aligned_cols=70 Identities=21% Similarity=0.289 Sum_probs=42.9
Q ss_pred CCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHH--HHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHC
Q ss_conf 99741888874366543209998766888999--99999970399998078889997199999999999755
Q 005511 20 NKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQI--ERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIAS 89 (693)
Q Consensus 20 ~~~~~l~~~~~~l~~~~~~~~~~~ivG~~~~~--~~l~~~l~~~~~~~ilL~GppGtGKT~la~~la~~l~~ 89 (693)
+|...++-|.....++|+.....++.-+--.+ .+...++.......+++.|.+|+|||..++.+.+.+..
T Consensus 80 NP~k~l~iy~~~~~~~y~~~~~~~~~PHifaiA~~Ay~~m~~~~~nQsIiisGeSGaGKTe~~k~il~yL~~ 151 (712)
T d1d0xa2 80 NPFKRIPIYTQEMVDIFKGRRRNEVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLAS 151 (712)
T ss_dssp CCSSCCSCCSHHHHHHHTTCCGGGSCCCHHHHHHHHHHHHHHHTCCEEEEEECSTTSSHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHH
T ss_conf 899989999989999971887688998599999999999997389916999679988889999999999998
No 254
>d1lkxa_ c.37.1.9 (A:) Myosin S1, motor domain {Dictyostelium discoideum, class-I myosin MyoE [TaxId: 44689]}
Probab=93.70 E-value=0.052 Score=27.35 Aligned_cols=71 Identities=17% Similarity=0.153 Sum_probs=49.1
Q ss_pred CCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHH--HHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHH
Q ss_conf 9999741888874366543209998766888999--9999997039999807888999719999999999975
Q 005511 18 SGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQI--ERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIA 88 (693)
Q Consensus 18 ~~~~~~~l~~~~~~l~~~~~~~~~~~ivG~~~~~--~~l~~~l~~~~~~~ilL~GppGtGKT~la~~la~~l~ 88 (693)
+-+|...++-|.....++|+.....++.-+--.+ .....++.......+++.|.+|+|||..++.+.+.+.
T Consensus 39 avNP~~~l~~y~~~~~~~y~~~~~~~~~PHif~iA~~Ay~~l~~~~~~QsIiisGeSGsGKTe~~k~il~yL~ 111 (684)
T d1lkxa_ 39 STNPFKNLNIYKESDIKAYNGRYKYEMPPHMYALANDAYRSMRQSQENQCVIISGESGAGKTEASKKIMQFLT 111 (684)
T ss_dssp EECCSSCCSCCSHHHHHHHSSCCGGGSCCCHHHHHHHHHHHHHHHCCCEEEEEECSTTSSHHHHHHHHHHHHH
T ss_pred EECCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHH
T ss_conf 9779988999998999987599878899808999999999999708981899973898998999999999999
No 255
>d1nn5a_ c.37.1.1 (A:) Thymidylate kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.69 E-value=0.046 Score=27.70 Aligned_cols=33 Identities=18% Similarity=0.241 Sum_probs=26.7
Q ss_pred EEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEC
Q ss_conf 999515889279999999999639975405533
Q 005511 409 FIFSGPTGVGKSELAKALAAYYFGSEEAMIRLD 441 (693)
Q Consensus 409 ill~Gp~GtGKt~lA~~la~~l~~~~~~~~~~~ 441 (693)
+.|.|+.|+|||+.++.|++.+...+.+.+.+.
T Consensus 6 I~ieG~dGsGKsT~~~~L~~~L~~~g~~v~~~~ 38 (209)
T d1nn5a_ 6 IVLEGVDRAGKSTQSRKLVEALCAAGHRAELLR 38 (209)
T ss_dssp EEEEESTTSSHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEE
T ss_conf 999899888999999999999987799689996
No 256
>d1xjca_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Bacillus stearothermophilus [TaxId: 1422]}
Probab=93.67 E-value=0.036 Score=28.40 Aligned_cols=33 Identities=15% Similarity=0.063 Sum_probs=21.1
Q ss_pred EEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEE
Q ss_conf 899951588927999999999963997540553
Q 005511 408 SFIFSGPTGVGKSELAKALAAYYFGSEEAMIRL 440 (693)
Q Consensus 408 ~ill~Gp~GtGKt~lA~~la~~l~~~~~~~~~~ 440 (693)
.+.++|++|+|||+++..|...+-..+.....+
T Consensus 3 ii~I~G~~gSGKTTli~~l~~~L~~~g~~v~vi 35 (165)
T d1xjca_ 3 VWQVVGYKHSGKTTLMEKWVAAAVREGWRVGTV 35 (165)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHHHTTCCEEEE
T ss_pred EEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEE
T ss_conf 999980999989999999999998679837999
No 257
>d1znwa1 c.37.1.1 (A:20-201) Guanylate kinase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=93.65 E-value=0.025 Score=29.49 Aligned_cols=23 Identities=35% Similarity=0.637 Sum_probs=20.7
Q ss_pred EEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 89995158892799999999996
Q 005511 408 SFIFSGPTGVGKSELAKALAAYY 430 (693)
Q Consensus 408 ~ill~Gp~GtGKt~lA~~la~~l 430 (693)
.++|.||+|+||+++++.|.+..
T Consensus 4 iivl~GpsG~GK~tl~~~L~~~~ 26 (182)
T d1znwa1 4 VVVLSGPSAVGKSTVVRCLRERI 26 (182)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHHHC
T ss_conf 99998999999999999998458
No 258
>d1htwa_ c.37.1.18 (A:) Hypothetical protein HI0065 {Haemophilus influenzae [TaxId: 727]}
Probab=93.64 E-value=0.029 Score=29.05 Aligned_cols=22 Identities=23% Similarity=0.445 Sum_probs=11.4
Q ss_pred EEEECCCCCCHHHHHHHHHHHH
Q ss_conf 9995158892799999999996
Q 005511 409 FIFSGPTGVGKSELAKALAAYY 430 (693)
Q Consensus 409 ill~Gp~GtGKt~lA~~la~~l 430 (693)
++|.|+=|+|||+++|.+++.+
T Consensus 36 i~L~G~LGaGKTtfvr~~~~~l 57 (158)
T d1htwa_ 36 VYLNGDLGAGKTTLTRGMLQGI 57 (158)
T ss_dssp EEEECSTTSSHHHHHHHHHHHT
T ss_pred EEEECCCCCCHHHHHHHHHHHC
T ss_conf 9996687765889999987642
No 259
>d1svia_ c.37.1.8 (A:) Probable GTPase EngB {Bacillus subtilis [TaxId: 1423]}
Probab=93.61 E-value=0.12 Score=24.96 Aligned_cols=22 Identities=27% Similarity=0.548 Sum_probs=12.5
Q ss_pred CEEEEEECCCCCCHHHHHHHHH
Q ss_conf 4389995158892799999999
Q 005511 406 IASFIFSGPTGVGKSELAKALA 427 (693)
Q Consensus 406 ~~~ill~Gp~GtGKt~lA~~la 427 (693)
.+.+.+.|+||+|||++...|.
T Consensus 23 ~~~I~lvG~~n~GKSTLin~L~ 44 (195)
T d1svia_ 23 LPEIALAGRSNVGKSSFINSLI 44 (195)
T ss_dssp CCEEEEEEBTTSSHHHHHHHHH
T ss_pred CCEEEEECCCCCCHHHHHHHHC
T ss_conf 9899998999987999999852
No 260
>d1ctqa_ c.37.1.8 (A:) cH-p21 Ras protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.59 E-value=0.042 Score=28.01 Aligned_cols=20 Identities=40% Similarity=0.615 Sum_probs=13.3
Q ss_pred EEEECCCCCHHHHHHHHHHH
Q ss_conf 07888999719999999999
Q 005511 66 PCLIGEPGVGKTAIAEGLAQ 85 (693)
Q Consensus 66 ilL~GppGtGKT~la~~la~ 85 (693)
+++.|++|+|||++++.+..
T Consensus 6 i~viG~~~vGKTsli~~l~~ 25 (166)
T d1ctqa_ 6 LVVVGAGGVGKSALTIQLIQ 25 (166)
T ss_dssp EEEEESTTSSHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHH
T ss_conf 99999799899999999980
No 261
>d1xjca_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Bacillus stearothermophilus [TaxId: 1422]}
Probab=93.57 E-value=0.029 Score=29.13 Aligned_cols=25 Identities=20% Similarity=0.173 Sum_probs=21.9
Q ss_pred EEEECCCCCHHHHHHHHHHHHHHCC
Q ss_conf 0788899971999999999997559
Q 005511 66 PCLIGEPGVGKTAIAEGLAQRIASG 90 (693)
Q Consensus 66 ilL~GppGtGKT~la~~la~~l~~~ 90 (693)
+-+.|++|+||||++..++.++...
T Consensus 4 i~I~G~~gSGKTTli~~l~~~L~~~ 28 (165)
T d1xjca_ 4 WQVVGYKHSGKTTLMEKWVAAAVRE 28 (165)
T ss_dssp EEEECCTTSSHHHHHHHHHHHHHHT
T ss_pred EEEEECCCCCHHHHHHHHHHHHHHC
T ss_conf 9998099998999999999999867
No 262
>d1odfa_ c.37.1.6 (A:) Hypothetical protein Ygr205W {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=93.50 E-value=0.071 Score=26.39 Aligned_cols=50 Identities=12% Similarity=0.054 Sum_probs=30.7
Q ss_pred HHHCCCCCCEE--EECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCC
Q ss_conf 97039999807--8889997199999999999755999998899669998652101
Q 005511 57 ILGRRTKNNPC--LIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLV 110 (693)
Q Consensus 57 ~l~~~~~~~il--L~GppGtGKT~la~~la~~l~~~~~~~~~~~~~~~~~~~~~~~ 110 (693)
........+++ +.|++|+||||++..+...+..... ....+..+++.++.
T Consensus 19 ~~~~~~~~P~iIGi~G~qGSGKSTl~~~l~~~L~~~~~----~~~~v~~iS~DdfY 70 (286)
T d1odfa_ 19 WFETGNKCPLFIFFSGPQGSGKSFTSIQIYNHLMEKYG----GEKSIGYASIDDFY 70 (286)
T ss_dssp HHTTTCCSCEEEEEECCTTSSHHHHHHHHHHHHHHHHG----GGSCEEEEEGGGGB
T ss_pred HHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHC----CCCCEEEECCCCCC
T ss_conf 97048999889983799878899999999999998727----78606763567777
No 263
>d1uaaa1 c.37.1.19 (A:2-307) DEXX box DNA helicase {Escherichia coli, RepD [TaxId: 562]}
Probab=93.42 E-value=0.036 Score=28.45 Aligned_cols=28 Identities=11% Similarity=0.303 Sum_probs=21.6
Q ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHHC
Q ss_conf 9998999846742298899999997405
Q 005511 477 RPYTVVLFDEIEKAHPDVFNMMLQILED 504 (693)
Q Consensus 477 ~~~~vl~iDEid~l~~~~~~~Ll~~le~ 504 (693)
....++++||+.-+++.....+..+..+
T Consensus 205 ~~~~~i~vDE~QD~~~~~~~~l~~~~~~ 232 (306)
T d1uaaa1 205 NKIRYLLVDEYQDTNTSQYELVKLLVGS 232 (306)
T ss_dssp TTCSEEEESCGGGCBHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 9754787777987308988623200267
No 264
>d1fzqa_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus musculus), ARL3 [TaxId: 10090]}
Probab=93.35 E-value=0.022 Score=29.89 Aligned_cols=20 Identities=35% Similarity=0.529 Sum_probs=15.2
Q ss_pred EEEEECCCCCCHHHHHHHHH
Q ss_conf 89995158892799999999
Q 005511 408 SFIFSGPTGVGKSELAKALA 427 (693)
Q Consensus 408 ~ill~Gp~GtGKt~lA~~la 427 (693)
-+++.|++|+|||++...+.
T Consensus 18 kI~vvG~~~vGKSsLi~~l~ 37 (176)
T d1fzqa_ 18 RILLLGLDNAGKTTLLKQLA 37 (176)
T ss_dssp EEEEEESTTSSHHHHHHHHC
T ss_pred EEEEECCCCCCHHHHHHHHH
T ss_conf 99999999989999999996
No 265
>d1br2a2 c.37.1.9 (A:80-789) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]}
Probab=93.34 E-value=0.077 Score=26.17 Aligned_cols=72 Identities=21% Similarity=0.203 Sum_probs=48.1
Q ss_pred CCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHH--HHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHC
Q ss_conf 9999741888874366543209998766888999--99999970399998078889997199999999999755
Q 005511 18 SGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQI--ERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIAS 89 (693)
Q Consensus 18 ~~~~~~~l~~~~~~l~~~~~~~~~~~ivG~~~~~--~~l~~~l~~~~~~~ilL~GppGtGKT~la~~la~~l~~ 89 (693)
+-+|...++-|.....+.|+.....++--+--.+ +....++.......+++.|.+|.|||..++.+.+.+..
T Consensus 44 avNP~k~l~~y~~~~~~~y~~~~~~~~~PHif~vA~~Ay~~m~~~~~~Q~IiisGeSGaGKTe~~k~il~yL~~ 117 (710)
T d1br2a2 44 VINPYKQLPIYSEKIIDMYKGKKRHEMPPHIYAIADTAYRSMLQDREDQSILCTGESGAGKTENTKKVIQYLAV 117 (710)
T ss_dssp EECCSSCCTTCCHHHHHHTTTCCGGGSCCCHHHHHHHHHHHHHHHTCCEEEEEECSTTSSHHHHHHHHHHHHHH
T ss_pred EECCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHH
T ss_conf 97799889999889999980898788998099999999999998389917999718988889999999999998
No 266
>d1a7ja_ c.37.1.6 (A:) Phosphoribulokinase {Rhodobacter sphaeroides [TaxId: 1063]}
Probab=93.24 E-value=0.019 Score=30.28 Aligned_cols=39 Identities=15% Similarity=0.307 Sum_probs=26.9
Q ss_pred CEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCC
Q ss_conf 8078889997199999999999755999998899669998652101
Q 005511 65 NPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLV 110 (693)
Q Consensus 65 ~ilL~GppGtGKT~la~~la~~l~~~~~~~~~~~~~~~~~~~~~~~ 110 (693)
-+-+.|++|+||||+++++.+.+... +.....+...++.
T Consensus 6 IIgIaG~SGSGKTTva~~l~~i~~~~-------~v~~~iI~~Dsfy 44 (288)
T d1a7ja_ 6 IISVTGSSGAGTSTVKHTFDQIFRRE-------GVKAVSIEGDAFH 44 (288)
T ss_dssp EEEEESCC---CCTHHHHHHHHHHHH-------TCCEEEEEGGGGB
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHC-------CCCEEEEECCCCC
T ss_conf 99998999780999999999997156-------9976999477787
No 267
>d2fn4a1 c.37.1.8 (A:24-196) r-Ras {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.23 E-value=0.17 Score=23.87 Aligned_cols=20 Identities=35% Similarity=0.557 Sum_probs=11.4
Q ss_pred EEEECCCCCCHHHHHHHHHH
Q ss_conf 99951588927999999999
Q 005511 409 FIFSGPTGVGKSELAKALAA 428 (693)
Q Consensus 409 ill~Gp~GtGKt~lA~~la~ 428 (693)
+++.|.+|+|||++...+..
T Consensus 9 v~lvG~~~vGKTsLi~r~~~ 28 (173)
T d2fn4a1 9 LVVVGGGGVGKSALTIQFIQ 28 (173)
T ss_dssp EEEEECTTSSHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHH
T ss_conf 99999799698999999973
No 268
>d1mkya1 c.37.1.8 (A:2-172) Probable GTPase Der, N-terminal and middle domains {Thermotoga maritima [TaxId: 2336]}
Probab=93.19 E-value=0.17 Score=23.83 Aligned_cols=19 Identities=32% Similarity=0.655 Sum_probs=9.8
Q ss_pred EEEECCCCCHHHHHHHHHH
Q ss_conf 0788899971999999999
Q 005511 66 PCLIGEPGVGKTAIAEGLA 84 (693)
Q Consensus 66 ilL~GppGtGKT~la~~la 84 (693)
+.+.|+||+|||++++++.
T Consensus 3 V~liG~~n~GKSsLi~~L~ 21 (171)
T d1mkya1 3 VLIVGRPNVGKSTLFNKLV 21 (171)
T ss_dssp EEEECCTTSSHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHH
T ss_conf 9999999998999999996
No 269
>d2p67a1 c.37.1.10 (A:1-327) LAO/AO transport system kinase ArgK {Escherichia coli [TaxId: 562]}
Probab=93.15 E-value=0.16 Score=24.05 Aligned_cols=38 Identities=26% Similarity=0.350 Sum_probs=27.6
Q ss_pred EEEEEECCCCCCHHHHHHHHHHHHCCCCC--CEEEECCCC
Q ss_conf 38999515889279999999999639975--405533543
Q 005511 407 ASFIFSGPTGVGKSELAKALAAYYFGSEE--AMIRLDMSE 444 (693)
Q Consensus 407 ~~ill~Gp~GtGKt~lA~~la~~l~~~~~--~~~~~~~~~ 444 (693)
..+-++||||+|||++...++..+...+. ..+.+|.+.
T Consensus 55 ~~IgitG~pGaGKSTLi~~l~~~~~~~g~~vavlavDpss 94 (327)
T d2p67a1 55 LRLGVTGTPGAGKSTFLEAFGMLLIREGLKVAVIAVDPSS 94 (327)
T ss_dssp EEEEEEECTTSCHHHHHHHHHHHHHHTTCCEEEEEECCC-
T ss_pred EEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCE
T ss_conf 2897438999989999999999997569833220377761
No 270
>d1w7ja2 c.37.1.9 (A:63-792) Myosin S1, motor domain {Chicken (Gallus gallus), Va isoform [TaxId: 9031]}
Probab=93.12 E-value=0.076 Score=26.20 Aligned_cols=71 Identities=20% Similarity=0.205 Sum_probs=46.9
Q ss_pred CCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHH--HHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHC
Q ss_conf 999741888874366543209998766888999--99999970399998078889997199999999999755
Q 005511 19 GNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQI--ERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIAS 89 (693)
Q Consensus 19 ~~~~~~l~~~~~~l~~~~~~~~~~~ivG~~~~~--~~l~~~l~~~~~~~ilL~GppGtGKT~la~~la~~l~~ 89 (693)
-+|...++-|......+|+.....++.-+--.+ .+...++.......+++.|.+|+|||..++.+.+.+..
T Consensus 48 iNP~~~~~~y~~~~~~~y~~~~~~~~~PHif~vA~~Ay~~l~~~~~~Q~IiisGeSGsGKTe~~k~il~~l~~ 120 (730)
T d1w7ja2 48 INPYEQLPIYGEDIINAYSGQNMGDMDPHIFAVAEEAYKQMARDERNQSIIVSGESGAGKTVSAKYAMRYFAT 120 (730)
T ss_dssp ECCSSCCSCCSHHHHHHHTTCCGGGSCCCHHHHHHHHHHHHHHHTCCEEEEEECSTTSSHHHHHHHHHHHHHH
T ss_pred ECCCCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHH
T ss_conf 7899888999989999970898688998399999999999997089807999717999879999999999999
No 271
>d1z06a1 c.37.1.8 (A:32-196) Rab-33b {Mouse (Mus musculus) [TaxId: 10090]}
Probab=93.11 E-value=0.17 Score=23.75 Aligned_cols=20 Identities=30% Similarity=0.508 Sum_probs=15.0
Q ss_pred EEEECCCCCHHHHHHHHHHH
Q ss_conf 07888999719999999999
Q 005511 66 PCLIGEPGVGKTAIAEGLAQ 85 (693)
Q Consensus 66 ilL~GppGtGKT~la~~la~ 85 (693)
+++.|++|+|||++++.+..
T Consensus 5 v~liG~~~vGKTsLl~~~~~ 24 (165)
T d1z06a1 5 IIVIGDSNVGKTCLTYRFCA 24 (165)
T ss_dssp EEEECCTTSSHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHH
T ss_conf 99999999298999999973
No 272
>d2fn4a1 c.37.1.8 (A:24-196) r-Ras {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.09 E-value=0.062 Score=26.80 Aligned_cols=22 Identities=32% Similarity=0.527 Sum_probs=19.0
Q ss_pred CEEEECCCCCHHHHHHHHHHHH
Q ss_conf 8078889997199999999999
Q 005511 65 NPCLIGEPGVGKTAIAEGLAQR 86 (693)
Q Consensus 65 ~ilL~GppGtGKT~la~~la~~ 86 (693)
-+++.|.+|+|||+|++.+...
T Consensus 8 Kv~lvG~~~vGKTsLi~r~~~~ 29 (173)
T d2fn4a1 8 KLVVVGGGGVGKSALTIQFIQS 29 (173)
T ss_dssp EEEEEECTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHHC
T ss_conf 9999997996989999999739
No 273
>d1qzma_ c.37.1.20 (A:) ATPase domain of protease Lon (La) {Escherichia coli [TaxId: 562]}
Probab=93.03 E-value=0.18 Score=23.67 Aligned_cols=67 Identities=25% Similarity=0.255 Sum_probs=51.0
Q ss_pred CCCHHHHHHHHHHHHH-HHHHHHHCCCCEEEECHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 8999999999999999-9999983099859839889999998044988996037999999989999999
Q 005511 584 QLTKLEVKEIADIMLK-EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEK 651 (693)
Q Consensus 584 ~l~~~~~~~i~~~~l~-~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~g~r~l~~~i~~~i~~~l~~~ 651 (693)
-|+.+|..+|+.++|- ...+........+.++++++.++++. |....|.|.|++.+...+.......
T Consensus 2 GYt~~EK~~Iak~yLiPk~l~~~gl~~~~i~i~~~~l~~iI~~-YtrEaGVR~Ler~i~~I~Rk~a~~~ 69 (94)
T d1qzma_ 2 GYTEDEKLNIAKRHLLPKQIERNALKKGELTVDDSAIIGIIRY-YTREAGVRGLEREISKLCRKAVKQL 69 (94)
T ss_dssp CCCHHHHHHHHHHTHHHHHHHHTTCCTTTEEECHHHHHHHHHH-HCCCSSSHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH-HCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9988999999999838899998666521135559999999999-7237999899999999999999999
No 274
>d1uaaa1 c.37.1.19 (A:2-307) DEXX box DNA helicase {Escherichia coli, RepD [TaxId: 562]}
Probab=93.03 E-value=0.04 Score=28.14 Aligned_cols=27 Identities=22% Similarity=0.347 Sum_probs=19.2
Q ss_pred CCCCEEEECCCCCHHHHH-HHHHHHHHH
Q ss_conf 999807888999719999-999999975
Q 005511 62 TKNNPCLIGEPGVGKTAI-AEGLAQRIA 88 (693)
Q Consensus 62 ~~~~ilL~GppGtGKT~l-a~~la~~l~ 88 (693)
...++++.|+||||||++ +..++..+.
T Consensus 13 ~~~~~lI~g~aGTGKTt~l~~rv~~ll~ 40 (306)
T d1uaaa1 13 VTGPCLVLAGAGSGKTRVITNKIAHLIR 40 (306)
T ss_dssp CSSEEEECCCTTSCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEECCCCHHHHHHHHHHHHHH
T ss_conf 9999899962884389999999999999
No 275
>d1gsia_ c.37.1.1 (A:) Thymidylate kinase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=93.03 E-value=0.069 Score=26.51 Aligned_cols=24 Identities=25% Similarity=0.408 Sum_probs=16.4
Q ss_pred EEEECCCCCHHHHHHHHHHHHHHC
Q ss_conf 078889997199999999999755
Q 005511 66 PCLIGEPGVGKTAIAEGLAQRIAS 89 (693)
Q Consensus 66 ilL~GppGtGKT~la~~la~~l~~ 89 (693)
|.+.|+.|+||||+++.+++.+..
T Consensus 3 I~ieG~dGsGKST~~~~L~~~l~~ 26 (208)
T d1gsia_ 3 IAIEGVDGAGKRTLVEKLSGAFRA 26 (208)
T ss_dssp EEEECSTTSSHHHHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHHHH
T ss_conf 999899878999999999999987
No 276
>d1e9ra_ c.37.1.11 (A:) Bacterial conjugative coupling protein TrwB {Escherichia coli [TaxId: 562]}
Probab=92.92 E-value=0.04 Score=28.16 Aligned_cols=36 Identities=22% Similarity=0.367 Sum_probs=26.3
Q ss_pred CCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEE
Q ss_conf 9980788899971999999999997559999988996699986
Q 005511 63 KNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLD 105 (693)
Q Consensus 63 ~~~ilL~GppGtGKT~la~~la~~l~~~~~~~~~~~~~~~~~~ 105 (693)
..|+++.|++|+|||++++.+...+.. .+..++.++
T Consensus 50 ~~H~~I~G~tGsGKT~~l~~li~~~~~-------~g~~~iiiD 85 (433)
T d1e9ra_ 50 PRHLLVNGATGTGKSVLLRELAYTGLL-------RGDRMVIVD 85 (433)
T ss_dssp GGCEEEEECTTSSHHHHHHHHHHHHHH-------TTCEEEEEE
T ss_pred CCEEEEEECCCCCHHHHHHHHHHHHHH-------CCCCEEEEE
T ss_conf 265899907999689999999999984-------799889996
No 277
>d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]}
Probab=92.90 E-value=0.08 Score=26.06 Aligned_cols=70 Identities=16% Similarity=0.195 Sum_probs=44.1
Q ss_pred CCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHH--HHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHC
Q ss_conf 99741888874366543209998766888999--99999970399998078889997199999999999755
Q 005511 20 NKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQI--ERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIAS 89 (693)
Q Consensus 20 ~~~~~l~~~~~~l~~~~~~~~~~~ivG~~~~~--~~l~~~l~~~~~~~ilL~GppGtGKT~la~~la~~l~~ 89 (693)
+|...++-|.....++|+.....++.-+--.+ .+...++.......+++.|.+|+|||..++.+.+.+..
T Consensus 76 NP~k~l~iy~~~~~~~y~~~~~~~~~PHiyavA~~Ay~~m~~~~~nQ~IiisGESGaGKTe~~K~il~yL~~ 147 (789)
T d1kk8a2 76 NPYRRLPIYTDSVIAKYRGKRKTEIPPHLFSVADNAYQNMVTDRENQSCLITGESGAGKTENTKKVIMYLAK 147 (789)
T ss_dssp CCSSCCSTTSHHHHHHHTTCCGGGSCCCHHHHHHHHHHHHHHHTSEEEEEEECSTTSSHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHH
T ss_conf 899888999999999970898789998389999999999997189947999708999879999999999998
No 278
>d1ihua1 c.37.1.10 (A:1-296) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}
Probab=92.83 E-value=0.12 Score=24.87 Aligned_cols=51 Identities=20% Similarity=0.316 Sum_probs=36.0
Q ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHCCCC
Q ss_conf 9843899951588927999999999963997540553354322100011002899
Q 005511 404 RPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSP 458 (693)
Q Consensus 404 ~~~~~ill~Gp~GtGKt~lA~~la~~l~~~~~~~~~~~~~~~~~~~~~~~l~g~~ 458 (693)
.|+ .+++.|--|+|||++|-.+|..+-..+.+...+++... ++.+.++|..
T Consensus 7 ~p~-~i~~sGKGGVGKTTvaa~lA~~lA~~G~rVLlvD~Dp~---~~l~~~lg~~ 57 (296)
T d1ihua1 7 IPP-YLFFTGKGGVGKTSISCATAIRLAEQGKRVLLVSTDPA---SNVGQVFSQT 57 (296)
T ss_dssp CCS-EEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEECCTT---CCHHHHTTSC
T ss_pred CCE-EEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCC---CCHHHHHCCC
T ss_conf 985-99997998674999999999999978997899957999---8878881987
No 279
>d1v5wa_ c.37.1.11 (A:) Meiotic recombination protein DMC1/LIM15 homolog {Human (Homo sapiens) [TaxId: 9606]}
Probab=92.81 E-value=0.041 Score=28.04 Aligned_cols=23 Identities=22% Similarity=0.160 Sum_probs=20.5
Q ss_pred EEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 89995158892799999999996
Q 005511 408 SFIFSGPTGVGKSELAKALAAYY 430 (693)
Q Consensus 408 ~ill~Gp~GtGKt~lA~~la~~l 430 (693)
.++++||||+|||++|..++...
T Consensus 39 ~~~i~G~~GsGKT~lalq~~~~~ 61 (258)
T d1v5wa_ 39 ITEAFGEFRTGKTQLSHTLCVTA 61 (258)
T ss_dssp EEEEECCTTCTHHHHHHHHHHHT
T ss_pred EEEEECCCCCCHHHHHHHHHHHH
T ss_conf 99998899887889999999999
No 280
>d4tmka_ c.37.1.1 (A:) Thymidylate kinase {Escherichia coli [TaxId: 562]}
Probab=92.79 E-value=0.04 Score=28.09 Aligned_cols=26 Identities=19% Similarity=0.289 Sum_probs=18.5
Q ss_pred CCEEEECCCCCHHHHHHHHHHHHHHC
Q ss_conf 98078889997199999999999755
Q 005511 64 NNPCLIGEPGVGKTAIAEGLAQRIAS 89 (693)
Q Consensus 64 ~~ilL~GppGtGKT~la~~la~~l~~ 89 (693)
..|.+.|+.|+||||+++.+++.+..
T Consensus 3 kfIviEG~dGsGKsT~~~~L~~~L~~ 28 (210)
T d4tmka_ 3 KYIVIEGLEGAGKTTARNVVVETLEQ 28 (210)
T ss_dssp CEEEEEECTTSCHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHHH
T ss_conf 78999899888799999999999996
No 281
>d1szpa2 c.37.1.11 (A:145-395) DNA repair protein Rad51, catalytic domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=92.75 E-value=0.031 Score=28.86 Aligned_cols=46 Identities=22% Similarity=0.149 Sum_probs=28.1
Q ss_pred CCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECC
Q ss_conf 99998078889997199999999999755999998899669998652
Q 005511 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMG 107 (693)
Q Consensus 61 ~~~~~ilL~GppGtGKT~la~~la~~l~~~~~~~~~~~~~~~~~~~~ 107 (693)
++..-++++||||+|||+++..++...... ......+..+++++..
T Consensus 32 ~~G~~~li~G~pGsGKT~l~lq~~~~~~~~-~~~~~~~~~~~~i~~~ 77 (251)
T d1szpa2 32 ETGSITELFGEFRTGKSQLCHTLAVTCQIP-LDIGGGEGKCLYIDTE 77 (251)
T ss_dssp ESSSEEEEEESTTSSHHHHHHHHTTTTTSC-TTTTCCSCEEEEEESS
T ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHHHHH-HHHCCCCCEEEEEEEC
T ss_conf 699699998389998899999999986312-4312689639999402
No 282
>d1pzna2 c.37.1.11 (A:96-349) DNA repair protein Rad51, catalytic domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=92.74 E-value=0.046 Score=27.69 Aligned_cols=28 Identities=36% Similarity=0.429 Sum_probs=22.4
Q ss_pred CCCCCEEEECCCCCHHHHHHHHHHHHHH
Q ss_conf 9999807888999719999999999975
Q 005511 61 RTKNNPCLIGEPGVGKTAIAEGLAQRIA 88 (693)
Q Consensus 61 ~~~~~ilL~GppGtGKT~la~~la~~l~ 88 (693)
+...-++++||||+|||+++..++....
T Consensus 34 p~G~~~li~G~pGsGKT~~~lq~~~~~~ 61 (254)
T d1pzna2 34 ETQAITEVFGEFGSGKTQLAHTLAVMVQ 61 (254)
T ss_dssp ESSEEEEEEESTTSSHHHHHHHHHHHTT
T ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHHH
T ss_conf 5887999985898988999999999863
No 283
>d1u0la2 c.37.1.8 (A:69-293) Probable GTPase EngC (YjeQ), C-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=92.69 E-value=0.063 Score=26.77 Aligned_cols=21 Identities=38% Similarity=0.545 Sum_probs=18.2
Q ss_pred EEEEECCCCCCHHHHHHHHHH
Q ss_conf 899951588927999999999
Q 005511 408 SFIFSGPTGVGKSELAKALAA 428 (693)
Q Consensus 408 ~ill~Gp~GtGKt~lA~~la~ 428 (693)
..+|.|++|+||+++...|..
T Consensus 97 t~~~~G~SGVGKSTLiN~L~~ 117 (225)
T d1u0la2 97 ISTMAGLSGVGKSSLLNAINP 117 (225)
T ss_dssp EEEEECSTTSSHHHHHHHHST
T ss_pred EEEEECCCCCCHHHHHHHHCC
T ss_conf 089978898778888773053
No 284
>d1pjra1 c.37.1.19 (A:1-318) DEXX box DNA helicase {Bacillus stearothermophilus, PcrA [TaxId: 1422]}
Probab=92.67 E-value=0.051 Score=27.37 Aligned_cols=26 Identities=12% Similarity=0.378 Sum_probs=18.3
Q ss_pred CEEEEECCCCCCCHHHHHHHHHHHHC
Q ss_conf 98999846742298899999997405
Q 005511 479 YTVVLFDEIEKAHPDVFNMMLQILED 504 (693)
Q Consensus 479 ~~vl~iDEid~l~~~~~~~Ll~~le~ 504 (693)
..++++||+..+++-.+..+..+...
T Consensus 217 ~~~i~iDE~QD~s~~q~~~~~~l~~~ 242 (318)
T d1pjra1 217 FQYIHIDEYQDTNRAQYTLVKKLAER 242 (318)
T ss_dssp CSEEEESSGGGCCHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 31110387777789999999999876
No 285
>d1uf9a_ c.37.1.1 (A:) Dephospho-CoA kinase {Thermus thermophilus [TaxId: 274]}
Probab=92.61 E-value=0.052 Score=27.32 Aligned_cols=19 Identities=37% Similarity=0.485 Sum_probs=9.0
Q ss_pred EEEECCCCCCHHHHHHHHH
Q ss_conf 9995158892799999999
Q 005511 409 FIFSGPTGVGKSELAKALA 427 (693)
Q Consensus 409 ill~Gp~GtGKt~lA~~la 427 (693)
+-++|++|+|||++|+.|.
T Consensus 6 IgitG~~gSGKstva~~l~ 24 (191)
T d1uf9a_ 6 IGITGNIGSGKSTVAALLR 24 (191)
T ss_dssp EEEEECTTSCHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHH
T ss_conf 9998988778999999999
No 286
>d1gsia_ c.37.1.1 (A:) Thymidylate kinase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=92.60 E-value=0.063 Score=26.78 Aligned_cols=33 Identities=21% Similarity=0.397 Sum_probs=26.2
Q ss_pred EEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEC
Q ss_conf 999515889279999999999639975405533
Q 005511 409 FIFSGPTGVGKSELAKALAAYYFGSEEAMIRLD 441 (693)
Q Consensus 409 ill~Gp~GtGKt~lA~~la~~l~~~~~~~~~~~ 441 (693)
+.+.|+.|+|||++++.|++.+...+.+...+.
T Consensus 3 I~ieG~dGsGKST~~~~L~~~l~~~g~~v~~~~ 35 (208)
T d1gsia_ 3 IAIEGVDGAGKRTLVEKLSGAFRAAGRSVATLA 35 (208)
T ss_dssp EEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEE
T ss_conf 999899878999999999999987899789986
No 287
>d4tmka_ c.37.1.1 (A:) Thymidylate kinase {Escherichia coli [TaxId: 562]}
Probab=92.53 E-value=0.069 Score=26.49 Aligned_cols=27 Identities=15% Similarity=0.199 Sum_probs=22.7
Q ss_pred EEEECCCCCCHHHHHHHHHHHHCCCCC
Q ss_conf 999515889279999999999639975
Q 005511 409 FIFSGPTGVGKSELAKALAAYYFGSEE 435 (693)
Q Consensus 409 ill~Gp~GtGKt~lA~~la~~l~~~~~ 435 (693)
+.|.|+.|+|||+.++.|++.+...+.
T Consensus 5 IviEG~dGsGKsT~~~~L~~~L~~~g~ 31 (210)
T d4tmka_ 5 IVIEGLEGAGKTTARNVVVETLEQLGI 31 (210)
T ss_dssp EEEEECTTSCHHHHHHHHHHHHHHTTC
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHCCC
T ss_conf 999899888799999999999996799
No 288
>d1rifa_ c.37.1.23 (A:) DNA helicase UvsW {Bacteriophage T4 [TaxId: 10665]}
Probab=92.49 E-value=0.2 Score=23.25 Aligned_cols=23 Identities=39% Similarity=0.592 Sum_probs=18.3
Q ss_pred EEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 89995158892799999999996
Q 005511 408 SFIFSGPTGVGKSELAKALAAYY 430 (693)
Q Consensus 408 ~ill~Gp~GtGKt~lA~~la~~l 430 (693)
..++.-|+|+|||.+|-.++..+
T Consensus 130 ~~il~~pTGsGKT~i~~~i~~~~ 152 (282)
T d1rifa_ 130 RRILNLPTSAGRSLIQALLARYY 152 (282)
T ss_dssp EEEECCCTTSCHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCCHHHHHHHHHH
T ss_conf 72168871158307889999986
No 289
>d2onka1 c.37.1.12 (A:1-240) Molybdate/tungstate import ATP-binding protein WtpC (ModC) {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=92.49 E-value=0.041 Score=28.04 Aligned_cols=36 Identities=28% Similarity=0.498 Sum_probs=24.8
Q ss_pred EEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEECCCC
Q ss_conf 8999515889279999999999639975405533543
Q 005511 408 SFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSE 444 (693)
Q Consensus 408 ~ill~Gp~GtGKt~lA~~la~~l~~~~~~~~~~~~~~ 444 (693)
.+.+.||+|+|||++.++++..+ .....-+.++..+
T Consensus 26 ~~~liGpnGaGKSTll~~i~Gl~-~p~~G~I~~~G~~ 61 (240)
T d2onka1 26 YCVLLGPTGAGKSVFLELIAGIV-KPDRGEVRLNGAD 61 (240)
T ss_dssp EEEEECCTTSSHHHHHHHHHTSS-CCSEEEEEETTEE
T ss_pred EEEEECCCCCHHHHHHHHHHCCC-CCCCEEEEECCEE
T ss_conf 99999799980999999997399-9896289999999
No 290
>d1s96a_ c.37.1.1 (A:) Guanylate kinase {Escherichia coli [TaxId: 562]}
Probab=92.43 E-value=0.049 Score=27.52 Aligned_cols=23 Identities=43% Similarity=0.634 Sum_probs=20.5
Q ss_pred EEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 89995158892799999999996
Q 005511 408 SFIFSGPTGVGKSELAKALAAYY 430 (693)
Q Consensus 408 ~ill~Gp~GtGKt~lA~~la~~l 430 (693)
.+++.||+|+||+++.+.|.+..
T Consensus 4 livi~GPSG~GK~tl~~~L~~~~ 26 (205)
T d1s96a_ 4 LYIVSAPSGAGKSSLIQALLKTQ 26 (205)
T ss_dssp EEEEECCTTSCHHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHHHC
T ss_conf 99999999999999999998639
No 291
>d2bmfa2 c.37.1.14 (A:178-482) Dengue virus helicase {Dengue virus type 2 [TaxId: 11060]}
Probab=92.41 E-value=0.13 Score=24.63 Aligned_cols=23 Identities=22% Similarity=0.248 Sum_probs=15.3
Q ss_pred EEEEECCCCCCHHH--HHHHHHHHH
Q ss_conf 89995158892799--999999996
Q 005511 408 SFIFSGPTGVGKSE--LAKALAAYY 430 (693)
Q Consensus 408 ~ill~Gp~GtGKt~--lA~~la~~l 430 (693)
+.++.+|+|+|||+ +...+...+
T Consensus 11 ~~lv~~~TGsGKT~~~l~~~~~~~~ 35 (305)
T d2bmfa2 11 LTIMDLHPGAGKTKRYLPAIVREAI 35 (305)
T ss_dssp EEEECCCTTSSTTTTHHHHHHHHHH
T ss_pred CEEEEECCCCCHHHHHHHHHHHHHH
T ss_conf 4999979999787999999999987
No 292
>d1kgda_ c.37.1.1 (A:) Guanylate kinase-like domain of Cask {Human (Homo sapiens) [TaxId: 9606]}
Probab=92.37 E-value=0.056 Score=27.14 Aligned_cols=23 Identities=22% Similarity=0.521 Sum_probs=20.3
Q ss_pred EEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 89995158892799999999996
Q 005511 408 SFIFSGPTGVGKSELAKALAAYY 430 (693)
Q Consensus 408 ~ill~Gp~GtGKt~lA~~la~~l 430 (693)
.++|.||+|+||+++.+.|.+..
T Consensus 5 ~ivl~Gpsg~GK~tl~~~L~~~~ 27 (178)
T d1kgda_ 5 TLVLLGAHGVGRRHIKNTLITKH 27 (178)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHC
T ss_pred CEEEECCCCCCHHHHHHHHHHHC
T ss_conf 19999989999999999999709
No 293
>d2a5ja1 c.37.1.8 (A:9-181) Rab2b {Human (Homo sapiens) [TaxId: 9606]}
Probab=92.31 E-value=0.048 Score=27.59 Aligned_cols=20 Identities=45% Similarity=0.642 Sum_probs=11.2
Q ss_pred EEEECCCCCCHHHHHHHHHH
Q ss_conf 99951588927999999999
Q 005511 409 FIFSGPTGVGKSELAKALAA 428 (693)
Q Consensus 409 ill~Gp~GtGKt~lA~~la~ 428 (693)
+++.|++|+|||++...+..
T Consensus 6 ivvvG~~~vGKTsli~r~~~ 25 (173)
T d2a5ja1 6 YIIIGDTGVGKSCLLLQFTD 25 (173)
T ss_dssp EEEESSTTSSHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHC
T ss_conf 99999999399999999962
No 294
>d1ewqa2 c.37.1.12 (A:542-765) DNA repair protein MutS, the C-terminal domain {Thermus aquaticus [TaxId: 271]}
Probab=92.30 E-value=0.22 Score=23.03 Aligned_cols=110 Identities=18% Similarity=0.154 Sum_probs=48.3
Q ss_pred CEEEECCCCCHHHHHHHHHHHHH--HCC--CCCCCCCCCEE-----EEEECCCCCCCCCCCCHHHHH---HHHHHHHHHH
Q ss_conf 80788899971999999999997--559--99998899669-----998652101397446618999---9999999970
Q 005511 65 NPCLIGEPGVGKTAIAEGLAQRI--ASG--DVPDTIEGKKV-----ITLDMGLLVAGTKYRGEFEER---LKKLMEEIKQ 132 (693)
Q Consensus 65 ~ilL~GppGtGKT~la~~la~~l--~~~--~~~~~~~~~~~-----~~~~~~~~~~~~~~~g~~~~~---~~~~~~~~~~ 132 (693)
-++++||...|||++.+.++-.. ..- .+|- ....+ +...+.....-......+... ++.++..+
T Consensus 37 ~~iiTGpN~~GKSt~lk~i~l~~ilAq~G~~vpA--~~~~i~~~d~I~~~~~~~d~~~~~~StF~~el~~~~~il~~~-- 112 (224)
T d1ewqa2 37 LVLITGPNMAGKSTFLRQTALIALLAQVGSFVPA--EEAHLPLFDGIYTRIGASDDLAGGKSTFMVEMEEVALILKEA-- 112 (224)
T ss_dssp EEEEESCSSSSHHHHHHHHHHHHHHHTTTCCBSS--SEEEECCCSEEEEECCC------CCSHHHHHHHHHHHHHHHC--
T ss_pred EEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEC--CCEEEEECCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCC--
T ss_conf 7999788734532345565899999852504613--751994011699998777602378307898678898775028--
Q ss_pred CCCEEEEEECCCHHHHCCCCCCHHH-HHHHHHHHHCCCCCEEEEEECHHHH
Q ss_conf 8984999916003310899988476-9998833110798179997435889
Q 005511 133 SDEIILFIDEVHTLIGAGAAEGAID-AANILKPSLARGELQCIGATTLDEY 182 (693)
Q Consensus 133 ~~~~iL~iDEid~l~~~~~~~~~~~-~~~~L~~~l~~~~i~iI~~t~~~~~ 182 (693)
....+++|||+-+=.. ...+.. ...++..+.+. ...++++|...++
T Consensus 113 ~~~sLvliDE~~~gT~---~~eg~ala~aile~L~~~-~~~~i~tTH~~eL 159 (224)
T d1ewqa2 113 TENSLVLLDEVGRGTS---SLDGVAIATAVAEALHER-RAYTLFATHYFEL 159 (224)
T ss_dssp CTTEEEEEESTTTTSC---HHHHHHHHHHHHHHHHHH-TCEEEEECCCHHH
T ss_pred CCCCEEEECCCCCCCC---HHHHCCHHHHHHHHHHHC-CCCEEEEEECHHH
T ss_conf 9772785545456862---332002588888888623-7613786520233
No 295
>d2vp4a1 c.37.1.1 (A:12-208) Deoxyribonucleoside kinase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=92.30 E-value=0.023 Score=29.74 Aligned_cols=27 Identities=22% Similarity=0.535 Sum_probs=21.0
Q ss_pred CCCCEEEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 9984389995158892799999999996
Q 005511 403 NRPIASFIFSGPTGVGKSELAKALAAYY 430 (693)
Q Consensus 403 ~~~~~~ill~Gp~GtGKt~lA~~la~~l 430 (693)
++|.. +.+.|+.|+|||++++.|++.+
T Consensus 7 ~kp~~-I~ieG~~GsGKTTl~~~L~~~l 33 (197)
T d2vp4a1 7 TQPFT-VLIEGNIGSGKTTYLNHFEKYK 33 (197)
T ss_dssp CCCEE-EEEECSTTSCHHHHHHTTGGGT
T ss_pred CCCEE-EEEECCCCCCHHHHHHHHHHHH
T ss_conf 98619-9988999988899999999870
No 296
>d1n0wa_ c.37.1.11 (A:) DNA repair protein Rad51, catalytic domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=92.18 E-value=0.052 Score=27.35 Aligned_cols=23 Identities=22% Similarity=0.242 Sum_probs=20.5
Q ss_pred EEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 89995158892799999999996
Q 005511 408 SFIFSGPTGVGKSELAKALAAYY 430 (693)
Q Consensus 408 ~ill~Gp~GtGKt~lA~~la~~l 430 (693)
.++++||||+|||+++..++...
T Consensus 25 v~~i~G~~GsGKT~l~l~la~~~ 47 (242)
T d1n0wa_ 25 ITEMFGEFRTGKTQICHTLAVTC 47 (242)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHT
T ss_pred EEEEEECCCCCHHHHHHHHHHHH
T ss_conf 99999589999999999999999
No 297
>d1e9ra_ c.37.1.11 (A:) Bacterial conjugative coupling protein TrwB {Escherichia coli [TaxId: 562]}
Probab=92.17 E-value=0.095 Score=25.53 Aligned_cols=29 Identities=17% Similarity=0.196 Sum_probs=17.3
Q ss_pred CCCCCCHHHHHHHHHHHHHHHCCCEEEEEE
Q ss_conf 974466189999999999970898499991
Q 005511 112 GTKYRGEFEERLKKLMEEIKQSDEIILFID 141 (693)
Q Consensus 112 ~~~~~g~~~~~~~~~~~~~~~~~~~iL~iD 141 (693)
|....|.+.. +..++..+...+..++++|
T Consensus 57 G~tGsGKT~~-l~~li~~~~~~g~~~iiiD 85 (433)
T d1e9ra_ 57 GATGTGKSVL-LRELAYTGLLRGDRMVIVD 85 (433)
T ss_dssp ECTTSSHHHH-HHHHHHHHHHTTCEEEEEE
T ss_pred ECCCCCHHHH-HHHHHHHHHHCCCCEEEEE
T ss_conf 0799968999-9999999984799889996
No 298
>d2i1qa2 c.37.1.11 (A:65-322) DNA repair protein Rad51, catalytic domain {Archaeon Methanococcus voltae [TaxId: 2188]}
Probab=92.10 E-value=0.046 Score=27.73 Aligned_cols=24 Identities=25% Similarity=0.256 Sum_probs=13.2
Q ss_pred CCEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 980788899971999999999997
Q 005511 64 NNPCLIGEPGVGKTAIAEGLAQRI 87 (693)
Q Consensus 64 ~~ilL~GppGtGKT~la~~la~~l 87 (693)
.-+++.|+||+|||+++..+|..+
T Consensus 35 ~l~~i~G~~G~GKT~~~l~~a~~~ 58 (258)
T d2i1qa2 35 SVTEFAGVFGSGKTQIMHQSCVNL 58 (258)
T ss_dssp EEEEEEESTTSSHHHHHHHHHHHT
T ss_pred EEEEEEECCCCCHHHHHHHHHHHH
T ss_conf 599999179999899999999999
No 299
>d2qtvb1 c.37.1.8 (B:24-189) SAR1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=91.97 E-value=0.055 Score=27.19 Aligned_cols=21 Identities=29% Similarity=0.460 Sum_probs=15.9
Q ss_pred EEEECCCCCCHHHHHHHHHHH
Q ss_conf 999515889279999999999
Q 005511 409 FIFSGPTGVGKSELAKALAAY 429 (693)
Q Consensus 409 ill~Gp~GtGKt~lA~~la~~ 429 (693)
+++.|+||+|||++...+...
T Consensus 3 I~liG~~nvGKSSLln~l~~~ 23 (166)
T d2qtvb1 3 LLFLGLDNAGKTTLLHMLKND 23 (166)
T ss_dssp EEEECSTTSSHHHHHHHHHHS
T ss_pred EEEECCCCCCHHHHHHHHHCC
T ss_conf 999999999999999999589
No 300
>d1rifa_ c.37.1.23 (A:) DNA helicase UvsW {Bacteriophage T4 [TaxId: 10665]}
Probab=91.97 E-value=0.16 Score=24.00 Aligned_cols=38 Identities=11% Similarity=0.139 Sum_probs=22.2
Q ss_pred CEEEEECCCCCCCHHHHHHHHHHHHCCEEECCCCCEEECCCEEEEEECCCC
Q ss_conf 989998467422988999999974056463799983316976999953888
Q 005511 479 YTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVG 529 (693)
Q Consensus 479 ~~vl~iDEid~l~~~~~~~Ll~~le~g~~~~~~~~~~~~~~~i~I~tsn~~ 529 (693)
.++|++||++.+.......++.-+.+ .+.++-+|.++.
T Consensus 226 f~~VIvDEaH~~~a~~~~~il~~~~~-------------~~~rlGlTaT~~ 263 (282)
T d1rifa_ 226 FGMMMNDECHLATGKSISSIISGLNN-------------CMFKFGLSGSLR 263 (282)
T ss_dssp EEEEEEETGGGCCHHHHHHHTTTCTT-------------CCEEEEECSSCC
T ss_pred CCEEEEECCCCCCCHHHHHHHHHCCC-------------CCEEEEEEEECC
T ss_conf 87999989978883209999974618-------------896999996159
No 301
>d1upta_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARL1 [TaxId: 9606]}
Probab=91.94 E-value=0.056 Score=27.14 Aligned_cols=22 Identities=23% Similarity=0.357 Sum_probs=18.3
Q ss_pred EEEEECCCCCCHHHHHHHHHHH
Q ss_conf 8999515889279999999999
Q 005511 408 SFIFSGPTGVGKSELAKALAAY 429 (693)
Q Consensus 408 ~ill~Gp~GtGKt~lA~~la~~ 429 (693)
-++|.|+||+|||++.+.+...
T Consensus 7 kI~ivG~~~vGKSSLi~~~~~~ 28 (169)
T d1upta_ 7 RILILGLDGAGKTTILYRLQVG 28 (169)
T ss_dssp EEEEECSTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHCC
T ss_conf 9999999998999999999679
No 302
>d1vpla_ c.37.1.12 (A:) Putative ABC transporter TM0544 {Thermotoga maritima [TaxId: 2336]}
Probab=91.92 E-value=0.24 Score=22.74 Aligned_cols=23 Identities=26% Similarity=0.533 Sum_probs=20.7
Q ss_pred EEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 89995158892799999999996
Q 005511 408 SFIFSGPTGVGKSELAKALAAYY 430 (693)
Q Consensus 408 ~ill~Gp~GtGKt~lA~~la~~l 430 (693)
.+-+.||.|+|||++.++++..+
T Consensus 30 i~glvG~nGaGKSTLl~~l~G~~ 52 (238)
T d1vpla_ 30 IFGLIGPNGAGKTTTLRIISTLI 52 (238)
T ss_dssp EEEEECCTTSSHHHHHHHHTTSS
T ss_pred EEEEECCCCCCHHHHHHHHHCCC
T ss_conf 99999999999999999996698
No 303
>d3b60a1 c.37.1.12 (A:329-581) Multidrug resistance ABC transporter MsbA, C-terminal domain {Salmonella typhimurium [TaxId: 90371]}
Probab=91.91 E-value=0.033 Score=28.69 Aligned_cols=23 Identities=30% Similarity=0.671 Sum_probs=21.0
Q ss_pred EEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 89995158892799999999996
Q 005511 408 SFIFSGPTGVGKSELAKALAAYY 430 (693)
Q Consensus 408 ~ill~Gp~GtGKt~lA~~la~~l 430 (693)
.+.++||+|+|||+++++|+..+
T Consensus 43 ~iaivG~sGsGKSTLl~ll~gl~ 65 (253)
T d3b60a1 43 TVALVGRSGSGKSTIASLITRFY 65 (253)
T ss_dssp EEEEEECTTSSHHHHHHHHTTTT
T ss_pred EEEEECCCCCHHHHHHHHHHCCC
T ss_conf 99999999985999999986216
No 304
>d1l2ta_ c.37.1.12 (A:) MJ0796 {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=91.80 E-value=0.048 Score=27.56 Aligned_cols=23 Identities=26% Similarity=0.449 Sum_probs=20.4
Q ss_pred EEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 89995158892799999999996
Q 005511 408 SFIFSGPTGVGKSELAKALAAYY 430 (693)
Q Consensus 408 ~ill~Gp~GtGKt~lA~~la~~l 430 (693)
.+.+.||+|+|||++.++++...
T Consensus 33 ~~~iiG~sGsGKSTLl~~i~gl~ 55 (230)
T d1l2ta_ 33 FVSIMGPSGSGKSTMLNIIGCLD 55 (230)
T ss_dssp EEEEECSTTSSHHHHHHHHTTSS
T ss_pred EEEEECCCCCCCCHHHHHCCCCC
T ss_conf 99998899998216557506887
No 305
>d1tmka_ c.37.1.1 (A:) Thymidylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=91.79 E-value=0.1 Score=25.29 Aligned_cols=24 Identities=21% Similarity=0.177 Sum_probs=13.4
Q ss_pred CCEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 980788899971999999999997
Q 005511 64 NNPCLIGEPGVGKTAIAEGLAQRI 87 (693)
Q Consensus 64 ~~ilL~GppGtGKT~la~~la~~l 87 (693)
.-|.+.|+-|+||||+++.+++.+
T Consensus 4 k~I~iEG~DGsGKST~~~~L~~~L 27 (214)
T d1tmka_ 4 KLILIEGLDRTGKTTQCNILYKKL 27 (214)
T ss_dssp CEEEEEESTTSSHHHHHHHHHHHT
T ss_pred EEEEEECCCCCCHHHHHHHHHHHH
T ss_conf 899998998886999999999999
No 306
>d1r0wa_ c.37.1.12 (A:) Cystic fibrosis transmembrane conductance regulator, CFTR, nucleotide-binding domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=91.74 E-value=0.044 Score=27.85 Aligned_cols=27 Identities=19% Similarity=0.291 Sum_probs=22.4
Q ss_pred CCCCCEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 999980788899971999999999997
Q 005511 61 RTKNNPCLIGEPGVGKTAIAEGLAQRI 87 (693)
Q Consensus 61 ~~~~~ilL~GppGtGKT~la~~la~~l 87 (693)
.+..-+.+.||+|+||||+++.++..+
T Consensus 60 ~~Ge~vaivG~nGsGKSTLl~~i~Gl~ 86 (281)
T d1r0wa_ 60 EKGEMLAITGSTGSGKTSLLMLILGEL 86 (281)
T ss_dssp CTTCEEEEEESTTSSHHHHHHHHHTSS
T ss_pred CCCCEEEEECCCCCHHHHHHHHHHCCC
T ss_conf 599999999899982999999995797
No 307
>d1z2aa1 c.37.1.8 (A:8-171) Rab23 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=91.73 E-value=0.061 Score=26.88 Aligned_cols=20 Identities=20% Similarity=0.486 Sum_probs=10.0
Q ss_pred EEEECCCCCHHHHHHHHHHH
Q ss_conf 07888999719999999999
Q 005511 66 PCLIGEPGVGKTAIAEGLAQ 85 (693)
Q Consensus 66 ilL~GppGtGKT~la~~la~ 85 (693)
+++.|+||+|||+|++.+.+
T Consensus 5 v~liG~~~vGKSsLi~rl~~ 24 (164)
T d1z2aa1 5 MVVVGNGAVGKSSMIQRYCK 24 (164)
T ss_dssp EEEECSTTSSHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHH
T ss_conf 99999899598999999982
No 308
>d1yrba1 c.37.1.10 (A:1-244) ATP(GTP)-binding protein PAB0955 {Pyrococcus abyssi [TaxId: 29292]}
Probab=91.71 E-value=0.14 Score=24.39 Aligned_cols=33 Identities=21% Similarity=0.426 Sum_probs=24.8
Q ss_pred EEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEC
Q ss_conf 8999515889279999999999639975405533
Q 005511 408 SFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLD 441 (693)
Q Consensus 408 ~ill~Gp~GtGKt~lA~~la~~l~~~~~~~~~~~ 441 (693)
.+++.||+|+|||++...|.+.+. .+.....++
T Consensus 2 vi~v~G~~GsGKTTLl~~ll~~~~-~~~~~~ivn 34 (244)
T d1yrba1 2 IVVFVGTAGSGKTTLTGEFGRYLE-DNYKVAYVN 34 (244)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHT-TTSCEEEEE
T ss_pred EEEEECCCCCCHHHHHHHHHHHHH-HCCEEEEEE
T ss_conf 899991899839999999999884-387689996
No 309
>d2i1qa2 c.37.1.11 (A:65-322) DNA repair protein Rad51, catalytic domain {Archaeon Methanococcus voltae [TaxId: 2188]}
Probab=91.66 E-value=0.077 Score=26.15 Aligned_cols=24 Identities=21% Similarity=0.285 Sum_probs=21.2
Q ss_pred EEEEECCCCCCHHHHHHHHHHHHC
Q ss_conf 899951588927999999999963
Q 005511 408 SFIFSGPTGVGKSELAKALAAYYF 431 (693)
Q Consensus 408 ~ill~Gp~GtGKt~lA~~la~~l~ 431 (693)
.++++|+||+|||+++..+|....
T Consensus 36 l~~i~G~~G~GKT~~~l~~a~~~~ 59 (258)
T d2i1qa2 36 VTEFAGVFGSGKTQIMHQSCVNLQ 59 (258)
T ss_dssp EEEEEESTTSSHHHHHHHHHHHTT
T ss_pred EEEEEECCCCCHHHHHHHHHHHHH
T ss_conf 999991799998999999999998
No 310
>d2ocpa1 c.37.1.1 (A:37-277) Deoxyguanosine kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=91.58 E-value=0.075 Score=26.25 Aligned_cols=24 Identities=21% Similarity=0.311 Sum_probs=13.1
Q ss_pred CCEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 980788899971999999999997
Q 005511 64 NNPCLIGEPGVGKTAIAEGLAQRI 87 (693)
Q Consensus 64 ~~ilL~GppGtGKT~la~~la~~l 87 (693)
.-+.+-|+-|+||||+++.+++.+
T Consensus 3 k~IviEG~~GsGKST~~~~L~~~l 26 (241)
T d2ocpa1 3 RRLSIEGNIAVGKSTFVKLLTKTY 26 (241)
T ss_dssp EEEEEEECTTSSHHHHHHHHHHHC
T ss_pred EEEEEECCCCCCHHHHHHHHHHHH
T ss_conf 199998998885999999999987
No 311
>d2qtvb1 c.37.1.8 (B:24-189) SAR1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=91.57 E-value=0.17 Score=23.78 Aligned_cols=22 Identities=23% Similarity=0.268 Sum_probs=19.3
Q ss_pred EEEECCCCCHHHHHHHHHHHHH
Q ss_conf 0788899971999999999997
Q 005511 66 PCLIGEPGVGKTAIAEGLAQRI 87 (693)
Q Consensus 66 ilL~GppGtGKT~la~~la~~l 87 (693)
++|.|+||+|||+|++.+...-
T Consensus 3 I~liG~~nvGKSSLln~l~~~~ 24 (166)
T d2qtvb1 3 LLFLGLDNAGKTTLLHMLKNDR 24 (166)
T ss_dssp EEEECSTTSSHHHHHHHHHHSC
T ss_pred EEEECCCCCCHHHHHHHHHCCC
T ss_conf 9999999999999999995899
No 312
>d1z2aa1 c.37.1.8 (A:8-171) Rab23 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=91.56 E-value=0.066 Score=26.61 Aligned_cols=21 Identities=24% Similarity=0.374 Sum_probs=18.6
Q ss_pred EEEECCCCCCHHHHHHHHHHH
Q ss_conf 999515889279999999999
Q 005511 409 FIFSGPTGVGKSELAKALAAY 429 (693)
Q Consensus 409 ill~Gp~GtGKt~lA~~la~~ 429 (693)
+++.|++|+|||++...+...
T Consensus 5 v~liG~~~vGKSsLi~rl~~~ 25 (164)
T d1z2aa1 5 MVVVGNGAVGKSSMIQRYCKG 25 (164)
T ss_dssp EEEECSTTSSHHHHHHHHHHC
T ss_pred EEEECCCCCCHHHHHHHHHHC
T ss_conf 999998995989999999829
No 313
>d1r8sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARF1 [TaxId: 9606]}
Probab=91.55 E-value=0.26 Score=22.58 Aligned_cols=23 Identities=26% Similarity=0.218 Sum_probs=19.9
Q ss_pred EEEECCCCCHHHHHHHHHHHHHH
Q ss_conf 07888999719999999999975
Q 005511 66 PCLIGEPGVGKTAIAEGLAQRIA 88 (693)
Q Consensus 66 ilL~GppGtGKT~la~~la~~l~ 88 (693)
+++.|+||+|||++++.+...-.
T Consensus 3 ivlvG~~~vGKSsLi~~l~~~~~ 25 (160)
T d1r8sa_ 3 ILMVGLDAAGKTTILYKLKLGEI 25 (160)
T ss_dssp EEEECSTTSSHHHHHHHHHHHCS
T ss_pred EEEECCCCCCHHHHHHHHHCCCC
T ss_conf 99999999898999999965988
No 314
>d1wb9a2 c.37.1.12 (A:567-800) DNA repair protein MutS, the C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=91.53 E-value=0.27 Score=22.46 Aligned_cols=108 Identities=19% Similarity=0.274 Sum_probs=52.2
Q ss_pred EEEEECCCCCCHHHHHHHHHHHHC----CCCCCEEEECCCCC---CCH-HHHHHHCCCCCCCCCCCCCCHHHHHHHC-CC
Q ss_conf 899951588927999999999963----99754055335432---210-0011002899987676751226699980-99
Q 005511 408 SFIFSGPTGVGKSELAKALAAYYF----GSEEAMIRLDMSEF---MER-HTVSKLIGSPPGYVGYTEGGQLTEAVRR-RP 478 (693)
Q Consensus 408 ~ill~Gp~GtGKt~lA~~la~~l~----~~~~~~~~~~~~~~---~~~-~~~~~l~g~~~~~~g~~~~~~l~~~~~~-~~ 478 (693)
.++++||...|||++.|.++-..+ +...|.-...++-+ ... .....+....+.+.. +-..+...++. ..
T Consensus 43 ~~iiTGpN~~GKSt~lk~i~l~~~laq~G~~VpA~~a~~~~~d~I~~~~~~~d~~~~~~S~F~~--E~~~~~~il~~~~~ 120 (234)
T d1wb9a2 43 MLIITGPNMGGKSTYMRQTALIALMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMV--EMTETANILHNATE 120 (234)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHHHHTTTCCBSSSEEEECCCCEEEEEEC-----------CHH--HHHHHHHHHHHCCT
T ss_pred EEEEECCCCHHHHHHHHHHHHHHHHHHCCCEEECCCEECCCCHHHEEEECCCCCCCCCHHHHHH--HHHHHHHHHHHCCC
T ss_conf 9999546731368999987999999872976741766613442023487467534365318999--99999999974546
Q ss_pred CEEEEECCCCCCCH-----HHHHHHHHHHHCCEEECCCCCEEECCCEEEEEECCCC
Q ss_conf 98999846742298-----8999999974056463799983316976999953888
Q 005511 479 YTVVLFDEIEKAHP-----DVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVG 529 (693)
Q Consensus 479 ~~vl~iDEid~l~~-----~~~~~Ll~~le~g~~~~~~~~~~~~~~~i~I~tsn~~ 529 (693)
++++++||+-+-.. ....+++..+.. ..+..+++||...
T Consensus 121 ~sLvliDE~~~gT~~~eg~~l~~a~l~~l~~------------~~~~~~i~tTH~~ 164 (234)
T d1wb9a2 121 YSLVLMDEIGRGTSTYDGLSLAWACAENLAN------------KIKALTLFATHYF 164 (234)
T ss_dssp TEEEEEESCCCCSSSSHHHHHHHHHHHHHHH------------TTCCEEEEECSCG
T ss_pred CCEEEECCCCCCCCHHHHHHHHHHHHHHHHC------------CCCCEEEEECCHH
T ss_conf 6088532223587745666789876454320------------4544289852468
No 315
>d1azta2 c.37.1.8 (A:35-65,A:202-391) Transducin (alpha subunit) {Cow (Bos taurus) [TaxId: 9913]}
Probab=91.51 E-value=0.26 Score=22.57 Aligned_cols=20 Identities=25% Similarity=0.416 Sum_probs=14.0
Q ss_pred CEEEECCCCCHHHHHHHHHH
Q ss_conf 80788899971999999999
Q 005511 65 NPCLIGEPGVGKTAIAEGLA 84 (693)
Q Consensus 65 ~ilL~GppGtGKT~la~~la 84 (693)
-++|.|++|+|||++++.+.
T Consensus 8 KilllG~~~vGKTsll~~~~ 27 (221)
T d1azta2 8 RLLLLGAGESGKSTIVKQMR 27 (221)
T ss_dssp EEEEECSTTSSHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHH
T ss_conf 79999899998899999895
No 316
>d2f7sa1 c.37.1.8 (A:5-190) Rab27b {Human (Homo sapiens) [TaxId: 9606]}
Probab=91.40 E-value=0.066 Score=26.63 Aligned_cols=19 Identities=26% Similarity=0.487 Sum_probs=9.8
Q ss_pred EEEECCCCCCHHHHHHHHH
Q ss_conf 9995158892799999999
Q 005511 409 FIFSGPTGVGKSELAKALA 427 (693)
Q Consensus 409 ill~Gp~GtGKt~lA~~la 427 (693)
+++.|++|+|||+++..+.
T Consensus 8 i~ivG~~~vGKTsLi~~l~ 26 (186)
T d2f7sa1 8 LLALGDSGVGKTTFLYRYT 26 (186)
T ss_dssp EEEESCTTSSHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHH
T ss_conf 9999999919899999996
No 317
>d1sgwa_ c.37.1.12 (A:) Putative ABC transporter PF0895 {Pyrococcus furiosus [TaxId: 2261]}
Probab=91.39 E-value=0.065 Score=26.66 Aligned_cols=26 Identities=23% Similarity=0.401 Sum_probs=14.9
Q ss_pred CCCCEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 99980788899971999999999997
Q 005511 62 TKNNPCLIGEPGVGKTAIAEGLAQRI 87 (693)
Q Consensus 62 ~~~~ilL~GppGtGKT~la~~la~~l 87 (693)
+..-+.|.||.|+||||+.+.++..+
T Consensus 26 ~Gei~~l~G~NGsGKSTLl~~i~gl~ 51 (200)
T d1sgwa_ 26 KGNVVNFHGPNGIGKTTLLKTISTYL 51 (200)
T ss_dssp TTCCEEEECCTTSSHHHHHHHHTTSS
T ss_pred CCCEEEEECCCCCHHHHHHHHHHCCC
T ss_conf 99899999999971999999996620
No 318
>d3raba_ c.37.1.8 (A:) Rab3a {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=91.39 E-value=0.069 Score=26.49 Aligned_cols=20 Identities=35% Similarity=0.434 Sum_probs=10.6
Q ss_pred EEEECCCCCHHHHHHHHHHH
Q ss_conf 07888999719999999999
Q 005511 66 PCLIGEPGVGKTAIAEGLAQ 85 (693)
Q Consensus 66 ilL~GppGtGKT~la~~la~ 85 (693)
+++.|++|+|||++++.+..
T Consensus 8 i~vvG~~~vGKTsLi~~l~~ 27 (169)
T d3raba_ 8 ILIIGNSSVGKTSFLFRYAD 27 (169)
T ss_dssp EEEECSTTSSHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHC
T ss_conf 99999999198999999973
No 319
>d2bcjq2 c.37.1.8 (Q:38-66,Q:184-354) Transducin (alpha subunit) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=91.32 E-value=0.28 Score=22.32 Aligned_cols=21 Identities=19% Similarity=0.260 Sum_probs=12.3
Q ss_pred EEEECCCCCHHHHHHHHHHHH
Q ss_conf 078889997199999999999
Q 005511 66 PCLIGEPGVGKTAIAEGLAQR 86 (693)
Q Consensus 66 ilL~GppGtGKT~la~~la~~ 86 (693)
+++.|.+|+|||++++.+...
T Consensus 5 iv~lG~~~vGKTsll~r~~~~ 25 (200)
T d2bcjq2 5 LLLLGTGESGKSTFIKQMRII 25 (200)
T ss_dssp EEEEESTTSSHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHCC
T ss_conf 999999999889999999679
No 320
>d1z0fa1 c.37.1.8 (A:8-173) Rab14 {Human (Homo sapiens) [TaxId: 9606]}
Probab=91.27 E-value=0.072 Score=26.36 Aligned_cols=20 Identities=30% Similarity=0.610 Sum_probs=11.4
Q ss_pred EEEECCCCCHHHHHHHHHHH
Q ss_conf 07888999719999999999
Q 005511 66 PCLIGEPGVGKTAIAEGLAQ 85 (693)
Q Consensus 66 ilL~GppGtGKT~la~~la~ 85 (693)
+++.|.+|+|||++++.+..
T Consensus 7 ivlvG~~~vGKTsli~~~~~ 26 (166)
T d1z0fa1 7 YIIIGDMGVGKSCLLHQFTE 26 (166)
T ss_dssp EEEECSTTSSHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHH
T ss_conf 99999999498999999972
No 321
>d2f9la1 c.37.1.8 (A:8-182) Rab11b {Human (Homo sapiens) [TaxId: 9606]}
Probab=91.26 E-value=0.073 Score=26.31 Aligned_cols=20 Identities=35% Similarity=0.634 Sum_probs=10.2
Q ss_pred EEEECCCCCCHHHHHHHHHH
Q ss_conf 99951588927999999999
Q 005511 409 FIFSGPTGVGKSELAKALAA 428 (693)
Q Consensus 409 ill~Gp~GtGKt~lA~~la~ 428 (693)
+++.|++|+|||++...+..
T Consensus 7 i~vvG~~~vGKTsLi~~~~~ 26 (175)
T d2f9la1 7 VVLIGDSGVGKSNLLSRFTR 26 (175)
T ss_dssp EEEESSTTSSHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHH
T ss_conf 99999999098999999982
No 322
>d1f6ba_ c.37.1.8 (A:) SAR1 {Chinese hamster (Cricetulus griseus) [TaxId: 10029]}
Probab=91.22 E-value=0.043 Score=27.90 Aligned_cols=21 Identities=29% Similarity=0.510 Sum_probs=16.8
Q ss_pred EEEEECCCCCCHHHHHHHHHH
Q ss_conf 899951588927999999999
Q 005511 408 SFIFSGPTGVGKSELAKALAA 428 (693)
Q Consensus 408 ~ill~Gp~GtGKt~lA~~la~ 428 (693)
-++|.|++|+|||++...+..
T Consensus 15 kI~lvG~~~vGKTsLl~~l~~ 35 (186)
T d1f6ba_ 15 KLVFLGLDNAGKTTLLHMLKD 35 (186)
T ss_dssp EEEEEEETTSSHHHHHHHHSC
T ss_pred EEEEECCCCCCHHHHHHHHHC
T ss_conf 899999999898999999967
No 323
>d1upta_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARL1 [TaxId: 9606]}
Probab=91.18 E-value=0.29 Score=22.22 Aligned_cols=23 Identities=30% Similarity=0.323 Sum_probs=19.7
Q ss_pred CEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 80788899971999999999997
Q 005511 65 NPCLIGEPGVGKTAIAEGLAQRI 87 (693)
Q Consensus 65 ~ilL~GppGtGKT~la~~la~~l 87 (693)
.+++.|+||+|||+|.+++...-
T Consensus 7 kI~ivG~~~vGKSSLi~~~~~~~ 29 (169)
T d1upta_ 7 RILILGLDGAGKTTILYRLQVGE 29 (169)
T ss_dssp EEEEECSTTSSHHHHHHHHHHSS
T ss_pred EEEEECCCCCCHHHHHHHHHCCC
T ss_conf 99999999989999999996798
No 324
>d1cr2a_ c.37.1.11 (A:) Gene 4 protein (g4p, DNA primase), helicase domain {Bacteriophage T7 [TaxId: 10760]}
Probab=90.97 E-value=0.2 Score=23.35 Aligned_cols=35 Identities=14% Similarity=0.207 Sum_probs=25.4
Q ss_pred EEEEECCCCCCHHHHHHHHHHHH-CCCCCCEEEECC
Q ss_conf 89995158892799999999996-399754055335
Q 005511 408 SFIFSGPTGVGKSELAKALAAYY-FGSEEAMIRLDM 442 (693)
Q Consensus 408 ~ill~Gp~GtGKt~lA~~la~~l-~~~~~~~~~~~~ 442 (693)
.+++.|+||+|||+++..++..+ ...+.+...+.+
T Consensus 37 l~vi~G~~G~GKT~~~~~la~~~a~~~g~~v~~~s~ 72 (277)
T d1cr2a_ 37 VIMVTSGSGMGKSTFVRQQALQWGTAMGKKVGLAML 72 (277)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHHHTSCCCEEEEES
T ss_pred EEEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEEE
T ss_conf 899994799979999999997265533663457640
No 325
>d2ew1a1 c.37.1.8 (A:4-174) Rab30 {Human (Homo sapiens) [TaxId: 9606]}
Probab=90.94 E-value=0.069 Score=26.51 Aligned_cols=20 Identities=45% Similarity=0.727 Sum_probs=11.0
Q ss_pred EEEECCCCCHHHHHHHHHHH
Q ss_conf 07888999719999999999
Q 005511 66 PCLIGEPGVGKTAIAEGLAQ 85 (693)
Q Consensus 66 ilL~GppGtGKT~la~~la~ 85 (693)
+++.|++|+|||++++.+.+
T Consensus 8 i~lvG~~~vGKTsLi~~l~~ 27 (171)
T d2ew1a1 8 IVLIGNAGVGKTCLVRRFTQ 27 (171)
T ss_dssp EEEEESTTSSHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHH
T ss_conf 99999999198999999972
No 326
>d1z08a1 c.37.1.8 (A:17-183) Rab21 {Human (Homo sapiens) [TaxId: 9606]}
Probab=90.91 E-value=0.083 Score=25.93 Aligned_cols=19 Identities=37% Similarity=0.492 Sum_probs=9.1
Q ss_pred EEEECCCCCHHHHHHHHHH
Q ss_conf 0788899971999999999
Q 005511 66 PCLIGEPGVGKTAIAEGLA 84 (693)
Q Consensus 66 ilL~GppGtGKT~la~~la 84 (693)
+++.|.+|+|||++++.+.
T Consensus 6 ivlvG~~~vGKTsLi~r~~ 24 (167)
T d1z08a1 6 VVLLGEGCVGKTSLVLRYC 24 (167)
T ss_dssp EEEECCTTSCHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHH
T ss_conf 9999999939899999998
No 327
>d1r2qa_ c.37.1.8 (A:) Rab5a {Human (Homo sapiens) [TaxId: 9606]}
Probab=90.86 E-value=0.083 Score=25.92 Aligned_cols=20 Identities=30% Similarity=0.569 Sum_probs=11.9
Q ss_pred EEEECCCCCHHHHHHHHHHH
Q ss_conf 07888999719999999999
Q 005511 66 PCLIGEPGVGKTAIAEGLAQ 85 (693)
Q Consensus 66 ilL~GppGtGKT~la~~la~ 85 (693)
+++.|.+|+|||+|++.+..
T Consensus 9 i~vvG~~~vGKTsLi~~l~~ 28 (170)
T d1r2qa_ 9 LVLLGESAVGKSSLVLRFVK 28 (170)
T ss_dssp EEEECSTTSSHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHH
T ss_conf 99999999498999999985
No 328
>d1uf9a_ c.37.1.1 (A:) Dephospho-CoA kinase {Thermus thermophilus [TaxId: 274]}
Probab=90.83 E-value=0.1 Score=25.28 Aligned_cols=21 Identities=29% Similarity=0.359 Sum_probs=17.2
Q ss_pred EEEECCCCCHHHHHHHHHHHHH
Q ss_conf 0788899971999999999997
Q 005511 66 PCLIGEPGVGKTAIAEGLAQRI 87 (693)
Q Consensus 66 ilL~GppGtGKT~la~~la~~l 87 (693)
+-++|++|+||||+|+.+. ..
T Consensus 6 IgitG~~gSGKstva~~l~-~~ 26 (191)
T d1uf9a_ 6 IGITGNIGSGKSTVAALLR-SW 26 (191)
T ss_dssp EEEEECTTSCHHHHHHHHH-HT
T ss_pred EEEECCCCCCHHHHHHHHH-HC
T ss_conf 9998988778999999999-87
No 329
>d1vg8a_ c.37.1.8 (A:) Rab7 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=90.83 E-value=0.086 Score=25.82 Aligned_cols=20 Identities=30% Similarity=0.644 Sum_probs=10.1
Q ss_pred EEEECCCCCHHHHHHHHHHH
Q ss_conf 07888999719999999999
Q 005511 66 PCLIGEPGVGKTAIAEGLAQ 85 (693)
Q Consensus 66 ilL~GppGtGKT~la~~la~ 85 (693)
+++.|.+|||||++++.+..
T Consensus 5 v~vvG~~~vGKSSLi~~l~~ 24 (184)
T d1vg8a_ 5 VIILGDSGVGKTSLMNQYVN 24 (184)
T ss_dssp EEEECCTTSSHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHH
T ss_conf 99999999198999999971
No 330
>d1b0ua_ c.37.1.12 (A:) ATP-binding subunit of the histidine permease {Salmonella typhimurium [TaxId: 90371]}
Probab=90.82 E-value=0.059 Score=26.95 Aligned_cols=27 Identities=22% Similarity=0.327 Sum_probs=21.4
Q ss_pred CCCCCEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 999980788899971999999999997
Q 005511 61 RTKNNPCLIGEPGVGKTAIAEGLAQRI 87 (693)
Q Consensus 61 ~~~~~ilL~GppGtGKT~la~~la~~l 87 (693)
....-+-+.||+|+||||+++.++...
T Consensus 26 ~~GEi~~iiG~sGsGKSTLl~~i~Gl~ 52 (258)
T d1b0ua_ 26 RAGDVISIIGSSGSGKSTFLRCINFLE 52 (258)
T ss_dssp CTTCEEEEECCTTSSHHHHHHHHTTSS
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHCCC
T ss_conf 699799999899982999999997476
No 331
>d1ky3a_ c.37.1.8 (A:) Rab-related protein ypt7p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=90.75 E-value=0.088 Score=25.75 Aligned_cols=19 Identities=32% Similarity=0.657 Sum_probs=9.2
Q ss_pred EEEECCCCCHHHHHHHHHH
Q ss_conf 0788899971999999999
Q 005511 66 PCLIGEPGVGKTAIAEGLA 84 (693)
Q Consensus 66 ilL~GppGtGKT~la~~la 84 (693)
+++.|++|+|||++++.+.
T Consensus 5 i~~vG~~~vGKSsLi~~~~ 23 (175)
T d1ky3a_ 5 VIILGDSGVGKTSLMHRYV 23 (175)
T ss_dssp EEEECCTTSSHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHH
T ss_conf 9999999969899999997
No 332
>d1kkma_ c.91.1.2 (A:) HPr kinase HprK C-terminal domain {Lactobacillus casei [TaxId: 1582]}
Probab=90.74 E-value=0.067 Score=26.56 Aligned_cols=34 Identities=32% Similarity=0.451 Sum_probs=22.8
Q ss_pred EEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCC
Q ss_conf 89995158892799999999996399754055335432
Q 005511 408 SFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEF 445 (693)
Q Consensus 408 ~ill~Gp~GtGKt~lA~~la~~l~~~~~~~~~~~~~~~ 445 (693)
.+||.|++|+|||++|..+.+. +..++.=|...+
T Consensus 16 gvl~~G~sG~GKStlal~l~~~----g~~lv~DD~~~i 49 (176)
T d1kkma_ 16 GVLITGDSGVGKSETALELVQR----GHRLIADDRVDV 49 (176)
T ss_dssp EEEEECCTTSCHHHHHHHHHHT----TCEEEEEEEEEE
T ss_pred EEEEEECCCCCHHHHHHHHHHC----CCEEEECCEEEE
T ss_conf 9999808999989999999985----991981686899
No 333
>d1tmka_ c.37.1.1 (A:) Thymidylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=90.54 E-value=0.12 Score=24.72 Aligned_cols=26 Identities=15% Similarity=0.133 Sum_probs=22.6
Q ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHC
Q ss_conf 843899951588927999999999963
Q 005511 405 PIASFIFSGPTGVGKSELAKALAAYYF 431 (693)
Q Consensus 405 ~~~~ill~Gp~GtGKt~lA~~la~~l~ 431 (693)
++. +.|.|+.|+|||+.++.|++.+.
T Consensus 3 Gk~-I~iEG~DGsGKST~~~~L~~~L~ 28 (214)
T d1tmka_ 3 GKL-ILIEGLDRTGKTTQCNILYKKLQ 28 (214)
T ss_dssp CCE-EEEEESTTSSHHHHHHHHHHHTT
T ss_pred EEE-EEEECCCCCCHHHHHHHHHHHHH
T ss_conf 689-99989988869999999999997
No 334
>d2bv3a2 c.37.1.8 (A:7-282) Elongation factor G (EF-G), N-terminal (G) domain {Thermus thermophilus [TaxId: 274]}
Probab=90.49 E-value=0.15 Score=24.25 Aligned_cols=27 Identities=19% Similarity=0.140 Sum_probs=22.0
Q ss_pred CCCCEEEECCCCCHHHHHHHHHHHHHH
Q ss_conf 999807888999719999999999975
Q 005511 62 TKNNPCLIGEPGVGKTAIAEGLAQRIA 88 (693)
Q Consensus 62 ~~~~ilL~GppGtGKT~la~~la~~l~ 88 (693)
+.+|+-+.|..|+|||+|+.++.....
T Consensus 5 ~iRni~i~gh~~~GKTtL~e~ll~~~g 31 (276)
T d2bv3a2 5 RLRNIGIAAHIDAGKTTTTERILYYTG 31 (276)
T ss_dssp GEEEEEEEECTTSCHHHHHHHHHHHHT
T ss_pred HCEEEEEEECCCCCHHHHHHHHHHHCC
T ss_conf 202999995898998999999999648
No 335
>d1oywa2 c.37.1.19 (A:1-206) RecQ helicase domain {Escherichia coli [TaxId: 562]}
Probab=90.49 E-value=0.33 Score=21.80 Aligned_cols=19 Identities=16% Similarity=0.111 Sum_probs=11.2
Q ss_pred CCEEEECCCCCHHHHHHHH
Q ss_conf 9807888999719999999
Q 005511 64 NNPCLIGEPGVGKTAIAEG 82 (693)
Q Consensus 64 ~~ilL~GppGtGKT~la~~ 82 (693)
.++++.-|+|+|||..+..
T Consensus 41 ~~vlv~apTGsGKT~~~~~ 59 (206)
T d1oywa2 41 RDCLVVMPTGGGKSLCYQI 59 (206)
T ss_dssp CCEEEECSCHHHHHHHHHH
T ss_pred CCEEEECCCCCCCCCHHHH
T ss_conf 9889986788997523120
No 336
>d2erxa1 c.37.1.8 (A:6-176) di-Ras2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=90.34 E-value=0.093 Score=25.59 Aligned_cols=20 Identities=25% Similarity=0.527 Sum_probs=14.9
Q ss_pred EEEECCCCCHHHHHHHHHHH
Q ss_conf 07888999719999999999
Q 005511 66 PCLIGEPGVGKTAIAEGLAQ 85 (693)
Q Consensus 66 ilL~GppGtGKT~la~~la~ 85 (693)
+++.|.+|+|||+|++.+..
T Consensus 5 i~viG~~~vGKTsLi~r~~~ 24 (171)
T d2erxa1 5 VAVFGAGGVGKSSLVLRFVK 24 (171)
T ss_dssp EEEECCTTSSHHHHHHHHHT
T ss_pred EEEECCCCCCHHHHHHHHHH
T ss_conf 99999899798999999970
No 337
>d2ocpa1 c.37.1.1 (A:37-277) Deoxyguanosine kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=90.34 E-value=0.067 Score=26.60 Aligned_cols=25 Identities=36% Similarity=0.549 Sum_probs=22.5
Q ss_pred CCEEEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 84389995158892799999999996
Q 005511 405 PIASFIFSGPTGVGKSELAKALAAYY 430 (693)
Q Consensus 405 ~~~~ill~Gp~GtGKt~lA~~la~~l 430 (693)
|+- +.+.|+.|+|||++++.|++.+
T Consensus 2 pk~-IviEG~~GsGKST~~~~L~~~l 26 (241)
T d2ocpa1 2 PRR-LSIEGNIAVGKSTFVKLLTKTY 26 (241)
T ss_dssp CEE-EEEEECTTSSHHHHHHHHHHHC
T ss_pred CEE-EEEECCCCCCHHHHHHHHHHHH
T ss_conf 819-9998998885999999999987
No 338
>d1a7ja_ c.37.1.6 (A:) Phosphoribulokinase {Rhodobacter sphaeroides [TaxId: 1063]}
Probab=90.29 E-value=0.08 Score=26.04 Aligned_cols=39 Identities=13% Similarity=0.299 Sum_probs=29.4
Q ss_pred EEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCC
Q ss_conf 899951588927999999999963997540553354322
Q 005511 408 SFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFM 446 (693)
Q Consensus 408 ~ill~Gp~GtGKt~lA~~la~~l~~~~~~~~~~~~~~~~ 446 (693)
.+-++|++|+|||++++.+.+.+-..+.+...+.+..|.
T Consensus 6 IIgIaG~SGSGKTTva~~l~~i~~~~~v~~~iI~~Dsfy 44 (288)
T d1a7ja_ 6 IISVTGSSGAGTSTVKHTFDQIFRREGVKAVSIEGDAFH 44 (288)
T ss_dssp EEEEESCC---CCTHHHHHHHHHHHHTCCEEEEEGGGGB
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCC
T ss_conf 999989997809999999999971569976999477787
No 339
>d1wb1a4 c.37.1.8 (A:1-179) Elongation factor SelB, N-terminal domain {Methanococcus maripaludis [TaxId: 39152]}
Probab=90.28 E-value=0.23 Score=22.86 Aligned_cols=20 Identities=30% Similarity=0.398 Sum_probs=12.6
Q ss_pred EEEEECCCCCCHHHHHHHHH
Q ss_conf 89995158892799999999
Q 005511 408 SFIFSGPTGVGKSELAKALA 427 (693)
Q Consensus 408 ~ill~Gp~GtGKt~lA~~la 427 (693)
++.+.|+|++|||++..+|.
T Consensus 7 nIaiiG~~naGKSTL~n~L~ 26 (179)
T d1wb1a4 7 NLGIFGHIDHGKTTLSKVLT 26 (179)
T ss_dssp EEEEEECTTSSHHHHHHHHH
T ss_pred EEEEEECCCCCHHHHHHHHH
T ss_conf 99999077870999999999
No 340
>d1wmsa_ c.37.1.8 (A:) Rab9a {Human (Homo sapiens) [TaxId: 9606]}
Probab=90.25 E-value=0.1 Score=25.27 Aligned_cols=20 Identities=40% Similarity=0.587 Sum_probs=10.0
Q ss_pred EEEECCCCCCHHHHHHHHHH
Q ss_conf 99951588927999999999
Q 005511 409 FIFSGPTGVGKSELAKALAA 428 (693)
Q Consensus 409 ill~Gp~GtGKt~lA~~la~ 428 (693)
+++.|++|+|||++...+..
T Consensus 9 I~vvG~~~vGKSSli~~~~~ 28 (174)
T d1wmsa_ 9 VILLGDGGVGKSSLMNRYVT 28 (174)
T ss_dssp EEEECCTTSSHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHH
T ss_conf 99999999799999999984
No 341
>d1htwa_ c.37.1.18 (A:) Hypothetical protein HI0065 {Haemophilus influenzae [TaxId: 727]}
Probab=90.25 E-value=0.17 Score=23.73 Aligned_cols=45 Identities=24% Similarity=0.366 Sum_probs=29.9
Q ss_pred CCCHHHHHHHHHHHHC-----CCCC--CEEEECCCCCHHHHHHHHHHHHHHC
Q ss_conf 6888999999999703-----9999--8078889997199999999999755
Q 005511 45 VGRQPQIERVVQILGR-----RTKN--NPCLIGEPGVGKTAIAEGLAQRIAS 89 (693)
Q Consensus 45 vG~~~~~~~l~~~l~~-----~~~~--~ilL~GppGtGKT~la~~la~~l~~ 89 (693)
+..+.+..++.+.+.. ...+ -++|.|+=|+|||++++.+++.+..
T Consensus 8 l~~e~~t~~lg~~la~~l~~~~~~~g~ii~L~G~LGaGKTtfvr~~~~~lg~ 59 (158)
T d1htwa_ 8 IPDEFSMLRFGKKFAEILLKLHTEKAIMVYLNGDLGAGKTTLTRGMLQGIGH 59 (158)
T ss_dssp ECSHHHHHHHHHHHHHHHHHHCCSSCEEEEEECSTTSSHHHHHHHHHHHTTC
T ss_pred CCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCC
T ss_conf 9799999999999999987515799829999668776588999998764223
No 342
>d1h65a_ c.37.1.8 (A:) Chloroplast protein translocon GTPase Toc34 {Garden pea (Pisum sativum) [TaxId: 3888]}
Probab=90.15 E-value=0.13 Score=24.65 Aligned_cols=22 Identities=27% Similarity=0.502 Sum_probs=17.1
Q ss_pred EEEEEECCCCCCHHHHHHHHHH
Q ss_conf 3899951588927999999999
Q 005511 407 ASFIFSGPTGVGKSELAKALAA 428 (693)
Q Consensus 407 ~~ill~Gp~GtGKt~lA~~la~ 428 (693)
..++|.|.||+|||++...|..
T Consensus 33 l~I~LvG~tg~GKSSliN~ilg 54 (257)
T d1h65a_ 33 LTILVMGKGGVGKSSTVNSIIG 54 (257)
T ss_dssp EEEEEEESTTSSHHHHHHHHHT
T ss_pred CEEEEECCCCCCHHHHHHHHHC
T ss_conf 4899989999869999999858
No 343
>d1vhta_ c.37.1.1 (A:) Dephospho-CoA kinase {Escherichia coli [TaxId: 562]}
Probab=90.12 E-value=0.11 Score=25.04 Aligned_cols=22 Identities=36% Similarity=0.522 Sum_probs=15.9
Q ss_pred EEEEECCCCCCHHHHHHHHHHH
Q ss_conf 8999515889279999999999
Q 005511 408 SFIFSGPTGVGKSELAKALAAY 429 (693)
Q Consensus 408 ~ill~Gp~GtGKt~lA~~la~~ 429 (693)
.+-++|++|+|||++++.+.+.
T Consensus 5 iIgitG~igSGKStv~~~l~~~ 26 (208)
T d1vhta_ 5 IVALTGGIGSGKSTVANAFADL 26 (208)
T ss_dssp EEEEECCTTSCHHHHHHHHHHT
T ss_pred EEEEECCCCCCHHHHHHHHHHC
T ss_conf 9997898868899999999987
No 344
>d1z0ja1 c.37.1.8 (A:2-168) Rab-22a {Mouse (Mus musculus) [TaxId: 10090]}
Probab=90.06 E-value=0.11 Score=25.10 Aligned_cols=20 Identities=35% Similarity=0.494 Sum_probs=9.8
Q ss_pred EEEECCCCCCHHHHHHHHHH
Q ss_conf 99951588927999999999
Q 005511 409 FIFSGPTGVGKSELAKALAA 428 (693)
Q Consensus 409 ill~Gp~GtGKt~lA~~la~ 428 (693)
+++.|.+|+|||++.+.+..
T Consensus 7 i~lvG~~~vGKTsli~rl~~ 26 (167)
T d1z0ja1 7 VCLLGDTGVGKSSIMWRFVE 26 (167)
T ss_dssp EEEECCTTSSHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHH
T ss_conf 99999899499999999973
No 345
>d1g16a_ c.37.1.8 (A:) Rab-related protein Sec4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=90.02 E-value=0.092 Score=25.63 Aligned_cols=20 Identities=35% Similarity=0.551 Sum_probs=12.3
Q ss_pred EEEECCCCCCHHHHHHHHHH
Q ss_conf 99951588927999999999
Q 005511 409 FIFSGPTGVGKSELAKALAA 428 (693)
Q Consensus 409 ill~Gp~GtGKt~lA~~la~ 428 (693)
+++.|++|+|||++...+..
T Consensus 5 i~vvG~~~vGKTSli~~l~~ 24 (166)
T d1g16a_ 5 ILLIGDSGVGKSCLLVRFVE 24 (166)
T ss_dssp EEEEESTTSSHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHH
T ss_conf 99999999678999999986
No 346
>d1b0ua_ c.37.1.12 (A:) ATP-binding subunit of the histidine permease {Salmonella typhimurium [TaxId: 90371]}
Probab=90.01 E-value=0.09 Score=25.70 Aligned_cols=23 Identities=22% Similarity=0.362 Sum_probs=20.4
Q ss_pred EEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 89995158892799999999996
Q 005511 408 SFIFSGPTGVGKSELAKALAAYY 430 (693)
Q Consensus 408 ~ill~Gp~GtGKt~lA~~la~~l 430 (693)
.+-+.||+|+|||+++++++...
T Consensus 30 i~~iiG~sGsGKSTLl~~i~Gl~ 52 (258)
T d1b0ua_ 30 VISIIGSSGSGKSTFLRCINFLE 52 (258)
T ss_dssp EEEEECCTTSSHHHHHHHHTTSS
T ss_pred EEEEECCCCCCHHHHHHHHHCCC
T ss_conf 99999899982999999997476
No 347
>d2vp4a1 c.37.1.1 (A:12-208) Deoxyribonucleoside kinase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=89.99 E-value=0.04 Score=28.14 Aligned_cols=27 Identities=19% Similarity=0.174 Sum_probs=22.3
Q ss_pred CCCCEEEECCCCCHHHHHHHHHHHHHH
Q ss_conf 999807888999719999999999975
Q 005511 62 TKNNPCLIGEPGVGKTAIAEGLAQRIA 88 (693)
Q Consensus 62 ~~~~ilL~GppGtGKT~la~~la~~l~ 88 (693)
.|--|.+-|+.|+||||+++.+++.+.
T Consensus 8 kp~~I~ieG~~GsGKTTl~~~L~~~l~ 34 (197)
T d2vp4a1 8 QPFTVLIEGNIGSGKTTYLNHFEKYKN 34 (197)
T ss_dssp CCEEEEEECSTTSCHHHHHHTTGGGTT
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHC
T ss_conf 861999889999888999999998707
No 348
>d2g6ba1 c.37.1.8 (A:58-227) Rab26 {Human (Homo sapiens) [TaxId: 9606]}
Probab=89.99 E-value=0.11 Score=25.10 Aligned_cols=20 Identities=35% Similarity=0.635 Sum_probs=10.5
Q ss_pred EEEECCCCCHHHHHHHHHHH
Q ss_conf 07888999719999999999
Q 005511 66 PCLIGEPGVGKTAIAEGLAQ 85 (693)
Q Consensus 66 ilL~GppGtGKT~la~~la~ 85 (693)
+++.|++|+|||++++.+.+
T Consensus 9 i~vvG~~~vGKTsli~~~~~ 28 (170)
T d2g6ba1 9 VMLVGDSGVGKTCLLVRFKD 28 (170)
T ss_dssp EEEECSTTSSHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHH
T ss_conf 99999999299999999971
No 349
>d1f6ba_ c.37.1.8 (A:) SAR1 {Chinese hamster (Cricetulus griseus) [TaxId: 10029]}
Probab=89.96 E-value=0.12 Score=24.76 Aligned_cols=33 Identities=24% Similarity=0.378 Sum_probs=23.0
Q ss_pred HHHHHC-CCCCCEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 999703-999980788899971999999999997
Q 005511 55 VQILGR-RTKNNPCLIGEPGVGKTAIAEGLAQRI 87 (693)
Q Consensus 55 ~~~l~~-~~~~~ilL~GppGtGKT~la~~la~~l 87 (693)
.+.+.. .+..-++|.|+||+|||+|.+++...-
T Consensus 4 ~~~~~~~~k~~kI~lvG~~~vGKTsLl~~l~~~~ 37 (186)
T d1f6ba_ 4 LQFLGLYKKTGKLVFLGLDNAGKTTLLHMLKDDR 37 (186)
T ss_dssp HHHHTCTTCCEEEEEEEETTSSHHHHHHHHSCC-
T ss_pred HHHCCCCCCCCEEEEECCCCCCHHHHHHHHHCCC
T ss_conf 7755534777789999999989899999996788
No 350
>d1jjva_ c.37.1.1 (A:) Dephospho-CoA kinase {Haemophilus influenzae [TaxId: 727]}
Probab=89.95 E-value=0.099 Score=25.40 Aligned_cols=20 Identities=25% Similarity=0.458 Sum_probs=14.2
Q ss_pred EEEECCCCCCHHHHHHHHHH
Q ss_conf 99951588927999999999
Q 005511 409 FIFSGPTGVGKSELAKALAA 428 (693)
Q Consensus 409 ill~Gp~GtGKt~lA~~la~ 428 (693)
+-++|++|+|||++|+.+.+
T Consensus 5 IgITG~igSGKStv~~~l~~ 24 (205)
T d1jjva_ 5 VGLTGGIGSGKTTIANLFTD 24 (205)
T ss_dssp EEEECSTTSCHHHHHHHHHT
T ss_pred EEEECCCCCCHHHHHHHHHH
T ss_conf 99888887889999999998
No 351
>d1mh1a_ c.37.1.8 (A:) Rac {Human (Homo sapiens) [TaxId: 9606]}
Probab=89.94 E-value=0.11 Score=25.05 Aligned_cols=20 Identities=25% Similarity=0.436 Sum_probs=10.8
Q ss_pred EEEECCCCCHHHHHHHHHHH
Q ss_conf 07888999719999999999
Q 005511 66 PCLIGEPGVGKTAIAEGLAQ 85 (693)
Q Consensus 66 ilL~GppGtGKT~la~~la~ 85 (693)
+++.|.+|+|||++++.+.+
T Consensus 8 ivviG~~~vGKTsli~~~~~ 27 (183)
T d1mh1a_ 8 CVVVGDGAVGKTCLLISYTT 27 (183)
T ss_dssp EEEECSTTSSHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHH
T ss_conf 99999999799999999974
No 352
>d1nlfa_ c.37.1.11 (A:) Hexameric replicative helicase repA {Escherichia coli [TaxId: 562]}
Probab=89.91 E-value=0.15 Score=24.18 Aligned_cols=23 Identities=43% Similarity=0.408 Sum_probs=20.3
Q ss_pred EEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 89995158892799999999996
Q 005511 408 SFIFSGPTGVGKSELAKALAAYY 430 (693)
Q Consensus 408 ~ill~Gp~GtGKt~lA~~la~~l 430 (693)
..+++|+||+|||+++..+|..+
T Consensus 31 ~~~i~G~~G~GKS~l~l~la~~i 53 (274)
T d1nlfa_ 31 VGALVSPGGAGKSMLALQLAAQI 53 (274)
T ss_dssp EEEEEESTTSSHHHHHHHHHHHH
T ss_pred EEEEEECCCCCHHHHHHHHHHHH
T ss_conf 89999289998999999999999
No 353
>d1c1ya_ c.37.1.8 (A:) Rap1A {Human (Homo sapiens) [TaxId: 9606]}
Probab=89.90 E-value=0.11 Score=25.02 Aligned_cols=20 Identities=35% Similarity=0.609 Sum_probs=9.9
Q ss_pred EEEECCCCCHHHHHHHHHHH
Q ss_conf 07888999719999999999
Q 005511 66 PCLIGEPGVGKTAIAEGLAQ 85 (693)
Q Consensus 66 ilL~GppGtGKT~la~~la~ 85 (693)
+++.|.+|+|||++++.+..
T Consensus 6 ivvvG~~~vGKTsli~r~~~ 25 (167)
T d1c1ya_ 6 LVVLGSGGVGKSALTVQFVQ 25 (167)
T ss_dssp EEEECSTTSSHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHC
T ss_conf 99999899899999999970
No 354
>d2cxxa1 c.37.1.8 (A:2-185) GTP-binding protein engB {Pyrococcus horikoshii [TaxId: 53953]}
Probab=89.88 E-value=0.081 Score=26.02 Aligned_cols=22 Identities=23% Similarity=0.391 Sum_probs=16.8
Q ss_pred CEEEECCCCCHHHHHHHHHHHH
Q ss_conf 8078889997199999999999
Q 005511 65 NPCLIGEPGVGKTAIAEGLAQR 86 (693)
Q Consensus 65 ~ilL~GppGtGKT~la~~la~~ 86 (693)
.++|.|+||+|||||.+++...
T Consensus 2 ~I~lvG~~nvGKSsLin~l~~~ 23 (184)
T d2cxxa1 2 TIIFAGRSNVGKSTLIYRLTGK 23 (184)
T ss_dssp EEEEEEBTTSSHHHHHHHHHSC
T ss_pred EEEEECCCCCCHHHHHHHHHCC
T ss_conf 8999999998899999999689
No 355
>d1oxxk2 c.37.1.12 (K:1-242) Glucose transport protein GlcV, N-terminal domain {Archaeon Sulfolobus solfataricus [TaxId: 2287]}
Probab=89.85 E-value=0.062 Score=26.83 Aligned_cols=23 Identities=30% Similarity=0.593 Sum_probs=21.0
Q ss_pred EEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 89995158892799999999996
Q 005511 408 SFIFSGPTGVGKSELAKALAAYY 430 (693)
Q Consensus 408 ~ill~Gp~GtGKt~lA~~la~~l 430 (693)
.+.+.||+|+|||++.++++...
T Consensus 33 ~~~iiG~sGsGKSTll~~i~gl~ 55 (242)
T d1oxxk2 33 RFGILGPSGAGKTTFMRIIAGLD 55 (242)
T ss_dssp EEEEECSCHHHHHHHHHHHHTSS
T ss_pred EEEEECCCCCCHHHHHHHHHCCC
T ss_conf 99999899980999999997586
No 356
>d1svia_ c.37.1.8 (A:) Probable GTPase EngB {Bacillus subtilis [TaxId: 1423]}
Probab=89.85 E-value=0.14 Score=24.28 Aligned_cols=23 Identities=26% Similarity=0.407 Sum_probs=20.1
Q ss_pred CCCEEEECCCCCHHHHHHHHHHH
Q ss_conf 99807888999719999999999
Q 005511 63 KNNPCLIGEPGVGKTAIAEGLAQ 85 (693)
Q Consensus 63 ~~~ilL~GppGtGKT~la~~la~ 85 (693)
.+.+.+.|+||+||||+.+++..
T Consensus 23 ~~~I~lvG~~n~GKSTLin~L~g 45 (195)
T d1svia_ 23 LPEIALAGRSNVGKSSFINSLIN 45 (195)
T ss_dssp CCEEEEEEBTTSSHHHHHHHHHT
T ss_pred CCEEEEECCCCCCHHHHHHHHCC
T ss_conf 98999989999879999998529
No 357
>d1gkub1 c.37.1.16 (B:1-250) Helicase-like "domain" of reverse gyrase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=89.78 E-value=0.38 Score=21.42 Aligned_cols=49 Identities=24% Similarity=0.238 Sum_probs=30.8
Q ss_pred HHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEC
Q ss_conf 89999999997039999807888999719999999999975599999889966999865
Q 005511 48 QPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDM 106 (693)
Q Consensus 48 ~~~~~~l~~~l~~~~~~~ilL~GppGtGKT~la~~la~~l~~~~~~~~~~~~~~~~~~~ 106 (693)
+-|...+...+. ..++++.+|+|+|||..+-..+..+.. .+.+++.+-.
T Consensus 46 ~~Q~~~i~~~l~---g~~~~i~apTGsGKT~~~~~~~~~~~~-------~~~rvliv~P 94 (237)
T d1gkub1 46 AIQKMWAKRILR---KESFAATAPTGVGKTSFGLAMSLFLAL-------KGKRCYVIFP 94 (237)
T ss_dssp HHHHHHHHHHHT---TCCEECCCCBTSCSHHHHHHHHHHHHT-------TSCCEEEEES
T ss_pred HHHHHHHHHHHC---CCCEEEEECCCCHHHHHHHHHHHHHHH-------HCCEEEEEEC
T ss_conf 999999999977---997799926897699999999999987-------4583899944
No 358
>d1x3sa1 c.37.1.8 (A:2-178) Rab18 {Human (Homo sapiens) [TaxId: 9606]}
Probab=89.74 E-value=0.12 Score=24.88 Aligned_cols=20 Identities=35% Similarity=0.587 Sum_probs=10.7
Q ss_pred EEEECCCCCCHHHHHHHHHH
Q ss_conf 99951588927999999999
Q 005511 409 FIFSGPTGVGKSELAKALAA 428 (693)
Q Consensus 409 ill~Gp~GtGKt~lA~~la~ 428 (693)
+++.|++|+|||++...+..
T Consensus 10 i~vvG~~~vGKTsli~~l~~ 29 (177)
T d1x3sa1 10 ILIIGESGVGKSSLLLRFTD 29 (177)
T ss_dssp EEEECSTTSSHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHH
T ss_conf 99999899088999999971
No 359
>d1xtqa1 c.37.1.8 (A:3-169) GTP-binding protein RheB {Human (Homo sapiens) [TaxId: 9606]}
Probab=89.72 E-value=0.1 Score=25.37 Aligned_cols=21 Identities=29% Similarity=0.300 Sum_probs=15.3
Q ss_pred EEEECCCCCCHHHHHHHHHHH
Q ss_conf 999515889279999999999
Q 005511 409 FIFSGPTGVGKSELAKALAAY 429 (693)
Q Consensus 409 ill~Gp~GtGKt~lA~~la~~ 429 (693)
+++.|++|+|||++...+...
T Consensus 7 v~liG~~~vGKTsLl~~~~~~ 27 (167)
T d1xtqa1 7 IAILGYRSVGKSSLTIQFVEG 27 (167)
T ss_dssp EEEEESTTSSHHHHHHHHHHS
T ss_pred EEEECCCCCCHHHHHHHHHHC
T ss_conf 999998992989999999719
No 360
>d2atva1 c.37.1.8 (A:5-172) Ras-like estrogen-regulated growth inhibitor, RERG {Human (Homo sapiens) [TaxId: 9606]}
Probab=89.71 E-value=0.11 Score=24.98 Aligned_cols=22 Identities=32% Similarity=0.410 Sum_probs=19.0
Q ss_pred EEEECCCCCCHHHHHHHHHHHH
Q ss_conf 9995158892799999999996
Q 005511 409 FIFSGPTGVGKSELAKALAAYY 430 (693)
Q Consensus 409 ill~Gp~GtGKt~lA~~la~~l 430 (693)
+++.|++|+|||++...+...-
T Consensus 5 i~lvG~~~vGKTsli~r~~~~~ 26 (168)
T d2atva1 5 LAIFGRAGVGKSALVVRFLTKR 26 (168)
T ss_dssp EEEECCTTSSHHHHHHHHHHSC
T ss_pred EEEECCCCCCHHHHHHHHHHCC
T ss_conf 9999989978999999997398
No 361
>d1tf7a1 c.37.1.11 (A:14-255) Circadian clock protein KaiC {Synechococcus sp. strain PCC 7942 (Anacystis nidulans R2) [TaxId: 1140]}
Probab=89.67 E-value=0.12 Score=24.74 Aligned_cols=22 Identities=27% Similarity=0.401 Sum_probs=18.1
Q ss_pred EEEEECCCCCCHHHHHHHHHHH
Q ss_conf 8999515889279999999999
Q 005511 408 SFIFSGPTGVGKSELAKALAAY 429 (693)
Q Consensus 408 ~ill~Gp~GtGKt~lA~~la~~ 429 (693)
.++++|+||+|||++|..++..
T Consensus 28 ~~~I~G~~G~GKT~la~~~~~~ 49 (242)
T d1tf7a1 28 STLVSGTSGTGKTLFSIQFLYN 49 (242)
T ss_dssp EEEEEESTTSSHHHHHHHHHHH
T ss_pred EEEEEECCCCCHHHHHHHHHHH
T ss_conf 9999947999999999999999
No 362
>d2bcgy1 c.37.1.8 (Y:3-196) GTPase Ytp1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=89.62 E-value=0.1 Score=25.29 Aligned_cols=20 Identities=35% Similarity=0.569 Sum_probs=11.2
Q ss_pred EEEECCCCCCHHHHHHHHHH
Q ss_conf 99951588927999999999
Q 005511 409 FIFSGPTGVGKSELAKALAA 428 (693)
Q Consensus 409 ill~Gp~GtGKt~lA~~la~ 428 (693)
+++.|++|+|||++...+..
T Consensus 9 ivvvG~~~vGKTsli~~l~~ 28 (194)
T d2bcgy1 9 LLLIGNSGVGKSCLLLRFSD 28 (194)
T ss_dssp EEEEESTTSSHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHH
T ss_conf 99999999098999999961
No 363
>d1kmqa_ c.37.1.8 (A:) RhoA {Human (Homo sapiens) [TaxId: 9606]}
Probab=89.61 E-value=0.1 Score=25.27 Aligned_cols=20 Identities=20% Similarity=0.288 Sum_probs=9.2
Q ss_pred EEEECCCCCCHHHHHHHHHH
Q ss_conf 99951588927999999999
Q 005511 409 FIFSGPTGVGKSELAKALAA 428 (693)
Q Consensus 409 ill~Gp~GtGKt~lA~~la~ 428 (693)
+++.|++|+|||++...+..
T Consensus 5 ivvvG~~~vGKTsLi~~~~~ 24 (177)
T d1kmqa_ 5 LVIVGDGACGKTCLLIVNSK 24 (177)
T ss_dssp EEEEESTTSSHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHH
T ss_conf 99999899388999999971
No 364
>d2bmea1 c.37.1.8 (A:6-179) Rab4a {Human (Homo sapiens) [TaxId: 9606]}
Probab=89.55 E-value=0.11 Score=25.23 Aligned_cols=19 Identities=37% Similarity=0.604 Sum_probs=9.9
Q ss_pred EEEECCCCCCHHHHHHHHH
Q ss_conf 9995158892799999999
Q 005511 409 FIFSGPTGVGKSELAKALA 427 (693)
Q Consensus 409 ill~Gp~GtGKt~lA~~la 427 (693)
+++.|.+|+|||++...+.
T Consensus 8 I~lvG~~~vGKTsll~~~~ 26 (174)
T d2bmea1 8 FLVIGNAGTGKSCLLHQFI 26 (174)
T ss_dssp EEEEESTTSSHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHH
T ss_conf 9999999909999999997
No 365
>d1ctqa_ c.37.1.8 (A:) cH-p21 Ras protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=89.48 E-value=0.13 Score=24.66 Aligned_cols=22 Identities=36% Similarity=0.511 Sum_probs=19.0
Q ss_pred EEEECCCCCCHHHHHHHHHHHH
Q ss_conf 9995158892799999999996
Q 005511 409 FIFSGPTGVGKSELAKALAAYY 430 (693)
Q Consensus 409 ill~Gp~GtGKt~lA~~la~~l 430 (693)
+++.|++|+|||++...+...-
T Consensus 6 i~viG~~~vGKTsli~~l~~~~ 27 (166)
T d1ctqa_ 6 LVVVGAGGVGKSALTIQLIQNH 27 (166)
T ss_dssp EEEEESTTSSHHHHHHHHHHCC
T ss_pred EEEECCCCCCHHHHHHHHHHCC
T ss_conf 9999979989999999998098
No 366
>d1kkma_ c.91.1.2 (A:) HPr kinase HprK C-terminal domain {Lactobacillus casei [TaxId: 1582]}
Probab=89.43 E-value=0.14 Score=24.27 Aligned_cols=25 Identities=36% Similarity=0.454 Sum_probs=21.0
Q ss_pred CCCCEEEECCCCCHHHHHHHHHHHH
Q ss_conf 9998078889997199999999999
Q 005511 62 TKNNPCLIGEPGVGKTAIAEGLAQR 86 (693)
Q Consensus 62 ~~~~ilL~GppGtGKT~la~~la~~ 86 (693)
...++||.|++|+|||++|..+.+.
T Consensus 13 ~g~gvl~~G~sG~GKStlal~l~~~ 37 (176)
T d1kkma_ 13 YGLGVLITGDSGVGKSETALELVQR 37 (176)
T ss_dssp TTEEEEEECCTTSCHHHHHHHHHHT
T ss_pred CCEEEEEEECCCCCHHHHHHHHHHC
T ss_conf 9999999808999989999999985
No 367
>d1deka_ c.37.1.1 (A:) Deoxynucleoside monophosphate kinase {Bacteriophage T4 [TaxId: 10665]}
Probab=89.40 E-value=0.19 Score=23.39 Aligned_cols=22 Identities=23% Similarity=0.191 Sum_probs=13.4
Q ss_pred EEEECCCCCHHHHHHHHHHHHH
Q ss_conf 0788899971999999999997
Q 005511 66 PCLIGEPGVGKTAIAEGLAQRI 87 (693)
Q Consensus 66 ilL~GppGtGKT~la~~la~~l 87 (693)
+-|+|+.|+||+|+|+.++...
T Consensus 4 IgiTG~igSGKsTva~~l~e~~ 25 (241)
T d1deka_ 4 IFLSGVKRSGKDTTADFIMSNY 25 (241)
T ss_dssp EEEECCTTSSHHHHHHHHHHHS
T ss_pred EEEECCCCCCHHHHHHHHHHHC
T ss_conf 9997999988999999999868
No 368
>d1vhta_ c.37.1.1 (A:) Dephospho-CoA kinase {Escherichia coli [TaxId: 562]}
Probab=89.39 E-value=0.14 Score=24.39 Aligned_cols=21 Identities=33% Similarity=0.582 Sum_probs=17.6
Q ss_pred EEEECCCCCHHHHHHHHHHHHH
Q ss_conf 0788899971999999999997
Q 005511 66 PCLIGEPGVGKTAIAEGLAQRI 87 (693)
Q Consensus 66 ilL~GppGtGKT~la~~la~~l 87 (693)
+-++|++|+||||+++.+. .+
T Consensus 6 IgitG~igSGKStv~~~l~-~~ 26 (208)
T d1vhta_ 6 VALTGGIGSGKSTVANAFA-DL 26 (208)
T ss_dssp EEEECCTTSCHHHHHHHHH-HT
T ss_pred EEEECCCCCCHHHHHHHHH-HC
T ss_conf 9978988688999999999-87
No 369
>d1ek0a_ c.37.1.8 (A:) Ypt51 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=89.37 E-value=0.13 Score=24.57 Aligned_cols=19 Identities=26% Similarity=0.529 Sum_probs=9.3
Q ss_pred EEEECCCCCCHHHHHHHHH
Q ss_conf 9995158892799999999
Q 005511 409 FIFSGPTGVGKSELAKALA 427 (693)
Q Consensus 409 ill~Gp~GtGKt~lA~~la 427 (693)
+++.|++|+|||++...+.
T Consensus 6 i~vvG~~~vGKTsLi~~~~ 24 (170)
T d1ek0a_ 6 LVLLGEAAVGKSSIVLRFV 24 (170)
T ss_dssp EEEECSTTSSHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHH
T ss_conf 9999999919899999997
No 370
>d1m7ba_ c.37.1.8 (A:) RhoE (RND3) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=89.34 E-value=0.11 Score=25.05 Aligned_cols=20 Identities=30% Similarity=0.506 Sum_probs=9.4
Q ss_pred EEEECCCCCHHHHHHHHHHH
Q ss_conf 07888999719999999999
Q 005511 66 PCLIGEPGVGKTAIAEGLAQ 85 (693)
Q Consensus 66 ilL~GppGtGKT~la~~la~ 85 (693)
++|.|.+|+|||++++.+..
T Consensus 5 ivliG~~~vGKTsli~r~~~ 24 (179)
T d1m7ba_ 5 IVVVGDSQCGKTALLHVFAK 24 (179)
T ss_dssp EEEEESTTSSHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHH
T ss_conf 99999999598999999972
No 371
>d1yzqa1 c.37.1.8 (A:14-177) Rab6 {Human (Homo sapiens) [TaxId: 9606]}
Probab=89.32 E-value=0.11 Score=25.04 Aligned_cols=20 Identities=30% Similarity=0.504 Sum_probs=12.1
Q ss_pred EEEECCCCCHHHHHHHHHHH
Q ss_conf 07888999719999999999
Q 005511 66 PCLIGEPGVGKTAIAEGLAQ 85 (693)
Q Consensus 66 ilL~GppGtGKT~la~~la~ 85 (693)
+++.|.+|+|||++++.+..
T Consensus 3 v~vvG~~~vGKTsLi~r~~~ 22 (164)
T d1yzqa1 3 LVFLGEQSVGKTSLITRFMY 22 (164)
T ss_dssp EEEEESTTSSHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHH
T ss_conf 99999899098999999984
No 372
>d1h65a_ c.37.1.8 (A:) Chloroplast protein translocon GTPase Toc34 {Garden pea (Pisum sativum) [TaxId: 3888]}
Probab=89.32 E-value=0.1 Score=25.36 Aligned_cols=37 Identities=16% Similarity=0.301 Sum_probs=25.9
Q ss_pred HHHHHHHHHHC--CCCCCEEEECCCCCHHHHHHHHHHHH
Q ss_conf 99999999703--99998078889997199999999999
Q 005511 50 QIERVVQILGR--RTKNNPCLIGEPGVGKTAIAEGLAQR 86 (693)
Q Consensus 50 ~~~~l~~~l~~--~~~~~ilL~GppGtGKT~la~~la~~ 86 (693)
.+.++...+.. ...-+++|.|.||+|||++++++..+
T Consensus 17 ~l~e~~~~l~~~~~~~l~I~LvG~tg~GKSSliN~ilg~ 55 (257)
T d1h65a_ 17 KLLELLGNLKQEDVNSLTILVMGKGGVGKSSTVNSIIGE 55 (257)
T ss_dssp HHHHHHHHHHHTTCCEEEEEEEESTTSSHHHHHHHHHTS
T ss_pred HHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHCC
T ss_conf 999999998645778748999899998699999998589
No 373
>d2g3ya1 c.37.1.8 (A:73-244) GTP-binding protein GEM {Human (Homo sapiens) [TaxId: 9606]}
Probab=89.29 E-value=0.13 Score=24.68 Aligned_cols=20 Identities=50% Similarity=0.718 Sum_probs=12.3
Q ss_pred EEEECCCCCHHHHHHHHHHH
Q ss_conf 07888999719999999999
Q 005511 66 PCLIGEPGVGKTAIAEGLAQ 85 (693)
Q Consensus 66 ilL~GppGtGKT~la~~la~ 85 (693)
+++.|.+|+|||+|++.+..
T Consensus 6 v~lvG~~~vGKTsLi~~~~~ 25 (172)
T d2g3ya1 6 VVLIGEQGVGKSTLANIFAG 25 (172)
T ss_dssp EEEECCTTSSHHHHHHHHHC
T ss_pred EEEECCCCCCHHHHHHHHHH
T ss_conf 99999899299999999972
No 374
>d1sgwa_ c.37.1.12 (A:) Putative ABC transporter PF0895 {Pyrococcus furiosus [TaxId: 2261]}
Probab=89.25 E-value=0.1 Score=25.38 Aligned_cols=23 Identities=39% Similarity=0.834 Sum_probs=20.6
Q ss_pred EEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 89995158892799999999996
Q 005511 408 SFIFSGPTGVGKSELAKALAAYY 430 (693)
Q Consensus 408 ~ill~Gp~GtGKt~lA~~la~~l 430 (693)
.+.+.||.|+|||++.++++..+
T Consensus 29 i~~l~G~NGsGKSTLl~~i~gl~ 51 (200)
T d1sgwa_ 29 VVNFHGPNGIGKTTLLKTISTYL 51 (200)
T ss_dssp CEEEECCTTSSHHHHHHHHTTSS
T ss_pred EEEEECCCCCHHHHHHHHHHCCC
T ss_conf 99999999971999999996620
No 375
>d1x1ra1 c.37.1.8 (A:10-178) Ras-related protein M-Ras (XRas) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=89.22 E-value=0.14 Score=24.38 Aligned_cols=20 Identities=35% Similarity=0.602 Sum_probs=9.5
Q ss_pred EEEECCCCCHHHHHHHHHHH
Q ss_conf 07888999719999999999
Q 005511 66 PCLIGEPGVGKTAIAEGLAQ 85 (693)
Q Consensus 66 ilL~GppGtGKT~la~~la~ 85 (693)
+++.|.+|+|||++++.+..
T Consensus 7 i~lvG~~~vGKTsll~~~~~ 26 (169)
T d1x1ra1 7 LVVVGDGGVGKSALTIQFFQ 26 (169)
T ss_dssp EEEECCTTSSHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHH
T ss_conf 99999899598999999970
No 376
>d2atxa1 c.37.1.8 (A:9-193) RhoQ {Human (Homo sapiens) [TaxId: 9606]}
Probab=89.08 E-value=0.12 Score=24.77 Aligned_cols=25 Identities=24% Similarity=0.259 Sum_probs=16.3
Q ss_pred CCEEEEEECCCCCCHHHHHHHHHHH
Q ss_conf 8438999515889279999999999
Q 005511 405 PIASFIFSGPTGVGKSELAKALAAY 429 (693)
Q Consensus 405 ~~~~ill~Gp~GtGKt~lA~~la~~ 429 (693)
+..-+++.|.+|+|||++...+...
T Consensus 8 ~~~Ki~lvG~~~vGKTsLi~r~~~~ 32 (185)
T d2atxa1 8 LMLKCVVVGDGAVGKTCLLMSYAND 32 (185)
T ss_dssp EEEEEEEEECTTSSHHHHHHHHHHS
T ss_pred CEEEEEEECCCCCCHHHHHHHHHHC
T ss_conf 1899999999998999999999649
No 377
>g1f2t.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=89.05 E-value=0.16 Score=24.01 Aligned_cols=28 Identities=14% Similarity=0.264 Sum_probs=22.9
Q ss_pred CCCEEEEECCCC-CCCHHHHHHHHHHHHC
Q ss_conf 999899984674-2298899999997405
Q 005511 477 RPYTVVLFDEIE-KAHPDVFNMMLQILED 504 (693)
Q Consensus 477 ~~~~vl~iDEid-~l~~~~~~~Ll~~le~ 504 (693)
..+.+++|||++ .+++..+..|..++..
T Consensus 224 ~~~~llllDEp~~~Ld~~~~~~l~~~l~~ 252 (292)
T g1f2t.1 224 GEISLLILDEPTPYLDEERRRKLITIMER 252 (292)
T ss_dssp SSCSEEEEESCSCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCCCCHHHHHHHHHHHHH
T ss_conf 79988997187554899999999999999
No 378
>d2ngra_ c.37.1.8 (A:) CDC42 {Human (Homo sapiens) [TaxId: 9606]}
Probab=88.92 E-value=0.12 Score=24.73 Aligned_cols=19 Identities=26% Similarity=0.366 Sum_probs=9.0
Q ss_pred EEEECCCCCCHHHHHHHHH
Q ss_conf 9995158892799999999
Q 005511 409 FIFSGPTGVGKSELAKALA 427 (693)
Q Consensus 409 ill~Gp~GtGKt~lA~~la 427 (693)
+++.|++|+|||++...+.
T Consensus 6 vvllG~~~vGKTSli~r~~ 24 (191)
T d2ngra_ 6 CVVVGDGAVGKTCLLISYT 24 (191)
T ss_dssp EEEEESTTSSHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHH
T ss_conf 9999999969999999997
No 379
>d1knxa2 c.91.1.2 (A:133-309) HPr kinase HprK C-terminal domain {Mycoplasma pneumoniae [TaxId: 2104]}
Probab=88.87 E-value=0.075 Score=26.26 Aligned_cols=34 Identities=29% Similarity=0.444 Sum_probs=23.4
Q ss_pred EEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCC
Q ss_conf 89995158892799999999996399754055335432
Q 005511 408 SFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEF 445 (693)
Q Consensus 408 ~ill~Gp~GtGKt~lA~~la~~l~~~~~~~~~~~~~~~ 445 (693)
.+||.||+|+|||++|..+.+. +..++.=|...+
T Consensus 17 gvli~G~sG~GKS~lal~l~~~----G~~lvaDD~v~~ 50 (177)
T d1knxa2 17 GVLLTGRSGIGKSECALDLINK----NHLFVGDDAIEI 50 (177)
T ss_dssp EEEEEESSSSSHHHHHHHHHTT----TCEEEEEEEEEE
T ss_pred EEEEECCCCCCHHHHHHHHHHC----CCCEECCCEEEE
T ss_conf 9999818999989999999985----974165876899
No 380
>d1ko7a2 c.91.1.2 (A:130-298) HPr kinase HprK C-terminal domain {Staphylococcus xylosus [TaxId: 1288]}
Probab=88.86 E-value=0.097 Score=25.49 Aligned_cols=22 Identities=36% Similarity=0.584 Sum_probs=17.6
Q ss_pred EEEEECCCCCCHHHHHHHHHHH
Q ss_conf 8999515889279999999999
Q 005511 408 SFIFSGPTGVGKSELAKALAAY 429 (693)
Q Consensus 408 ~ill~Gp~GtGKt~lA~~la~~ 429 (693)
.+||.|++|.|||++|-.+.+.
T Consensus 17 gvli~G~sg~GKS~la~~l~~~ 38 (169)
T d1ko7a2 17 GVLITGDSGIGKSETALELIKR 38 (169)
T ss_dssp EEEEEESTTSSHHHHHHHHHHT
T ss_pred EEEEEECCCCCHHHHHHHHHHC
T ss_conf 9999808999999999999984
No 381
>d2dy1a2 c.37.1.8 (A:8-274) Elongation factor G (EF-G), N-terminal (G) domain {Thermus thermophilus, EF-G-2 [TaxId: 274]}
Probab=88.86 E-value=0.44 Score=20.97 Aligned_cols=25 Identities=32% Similarity=0.582 Sum_probs=20.6
Q ss_pred CCEEEECCCCCHHHHHHHHHHHHHH
Q ss_conf 9807888999719999999999975
Q 005511 64 NNPCLIGEPGVGKTAIAEGLAQRIA 88 (693)
Q Consensus 64 ~~ilL~GppGtGKT~la~~la~~l~ 88 (693)
+|+.+.|+.|+|||||+.++.....
T Consensus 3 RNv~iiGh~~~GKTtL~e~ll~~~g 27 (267)
T d2dy1a2 3 RTVALVGHAGSGKTTLTEALLYKTG 27 (267)
T ss_dssp EEEEEEESTTSSHHHHHHHHHHHTT
T ss_pred EEEEEECCCCCCHHHHHHHHHHHCC
T ss_conf 0999994889809999999999709
No 382
>d1deka_ c.37.1.1 (A:) Deoxynucleoside monophosphate kinase {Bacteriophage T4 [TaxId: 10665]}
Probab=88.80 E-value=0.16 Score=23.96 Aligned_cols=33 Identities=18% Similarity=0.330 Sum_probs=26.0
Q ss_pred EEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCC
Q ss_conf 89995158892799999999996399754055335432
Q 005511 408 SFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEF 445 (693)
Q Consensus 408 ~ill~Gp~GtGKt~lA~~la~~l~~~~~~~~~~~~~~~ 445 (693)
.+-++|+.||||+++|+.|++.+ .+..+++++.
T Consensus 3 iIgiTG~igSGKsTva~~l~e~~-----g~~~i~~aD~ 35 (241)
T d1deka_ 3 LIFLSGVKRSGKDTTADFIMSNY-----SAVKYQLAGP 35 (241)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHS-----CEEECCTTHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHC-----CCEEECCCHH
T ss_conf 99997999988999999999868-----9859805299
No 383
>d1e0sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARF6 [TaxId: 9606]}
Probab=88.70 E-value=0.1 Score=25.38 Aligned_cols=21 Identities=19% Similarity=0.330 Sum_probs=16.6
Q ss_pred EEEEECCCCCCHHHHHHHHHH
Q ss_conf 899951588927999999999
Q 005511 408 SFIFSGPTGVGKSELAKALAA 428 (693)
Q Consensus 408 ~ill~Gp~GtGKt~lA~~la~ 428 (693)
.+++.|++|+|||++.+.+..
T Consensus 14 kIvlvG~~~vGKTSli~rl~~ 34 (173)
T d1e0sa_ 14 RILMLGLDAAGKTTILYKLKL 34 (173)
T ss_dssp EEEEEEETTSSHHHHHHHTTC
T ss_pred EEEEECCCCCCHHHHHHHHHC
T ss_conf 999999999878999999844
No 384
>d1cp2a_ c.37.1.10 (A:) Nitrogenase iron protein {Clostridium pasteurianum [TaxId: 1501]}
Probab=88.64 E-value=0.31 Score=21.96 Aligned_cols=38 Identities=18% Similarity=0.427 Sum_probs=29.0
Q ss_pred CEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCC
Q ss_conf 807888999719999999999975599999889966999865210
Q 005511 65 NPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLL 109 (693)
Q Consensus 65 ~ilL~GppGtGKT~la~~la~~l~~~~~~~~~~~~~~~~~~~~~~ 109 (693)
-+.++|.-|+||||++-.+|..+.. .|.++.-+++...
T Consensus 3 ~Iai~gKGGvGKTT~a~nLA~~LA~-------~G~rVllID~D~q 40 (269)
T d1cp2a_ 3 QVAIYGKGGIGKSTTTQNLTSGLHA-------MGKTIMVVGCDPK 40 (269)
T ss_dssp EEEEEECTTSSHHHHHHHHHHHHHT-------TTCCEEEEEECTT
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHH-------CCCCEEEEECCCC
T ss_conf 9999899857799999999999996-------8995899963799
No 385
>d1knxa2 c.91.1.2 (A:133-309) HPr kinase HprK C-terminal domain {Mycoplasma pneumoniae [TaxId: 2104]}
Probab=88.59 E-value=0.14 Score=24.30 Aligned_cols=24 Identities=29% Similarity=0.361 Sum_probs=20.4
Q ss_pred CCCCEEEECCCCCHHHHHHHHHHH
Q ss_conf 999807888999719999999999
Q 005511 62 TKNNPCLIGEPGVGKTAIAEGLAQ 85 (693)
Q Consensus 62 ~~~~ilL~GppGtGKT~la~~la~ 85 (693)
...++||.||+|.|||++|..+..
T Consensus 14 ~g~gvli~G~sG~GKS~lal~l~~ 37 (177)
T d1knxa2 14 FGVGVLLTGRSGIGKSECALDLIN 37 (177)
T ss_dssp TTEEEEEEESSSSSHHHHHHHHHT
T ss_pred CCEEEEEECCCCCCHHHHHHHHHH
T ss_conf 999999981899998999999998
No 386
>d1ji0a_ c.37.1.12 (A:) Branched chain aminoacid ABC transporter {Thermotoga maritima, TM1139 [TaxId: 2336]}
Probab=88.29 E-value=0.093 Score=25.59 Aligned_cols=23 Identities=26% Similarity=0.404 Sum_probs=20.6
Q ss_pred EEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 89995158892799999999996
Q 005511 408 SFIFSGPTGVGKSELAKALAAYY 430 (693)
Q Consensus 408 ~ill~Gp~GtGKt~lA~~la~~l 430 (693)
.+-|.||.|+|||++.++++..+
T Consensus 34 i~~liGpnGaGKSTl~~~i~Gl~ 56 (240)
T d1ji0a_ 34 IVTLIGANGAGKTTTLSAIAGLV 56 (240)
T ss_dssp EEEEECSTTSSHHHHHHHHTTSS
T ss_pred EEEEECCCCCCHHHHHHHHHCCC
T ss_conf 99999999985999999996788
No 387
>d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}
Probab=88.29 E-value=0.36 Score=21.57 Aligned_cols=38 Identities=21% Similarity=0.223 Sum_probs=31.2
Q ss_pred EEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEECCCC
Q ss_conf 38999515889279999999999639975405533543
Q 005511 407 ASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSE 444 (693)
Q Consensus 407 ~~ill~Gp~GtGKt~lA~~la~~l~~~~~~~~~~~~~~ 444 (693)
..+++.|--|+|||++|-.||..+-..+.....+|+-.
T Consensus 21 ~iii~sGKGGVGKTT~a~nLA~~lA~~G~rVllvD~Dp 58 (279)
T d1ihua2 21 GLIMLMGKGGVGKTTMAAAIAVRLADMGFDVHLTTSDP 58 (279)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESCC
T ss_pred EEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECCC
T ss_conf 89999799988789999999999997899389993799
No 388
>d2qm8a1 c.37.1.10 (A:5-327) Metallochaperone MeaB {Methylobacterium extorquens [TaxId: 408]}
Probab=88.16 E-value=0.48 Score=20.67 Aligned_cols=39 Identities=31% Similarity=0.380 Sum_probs=27.6
Q ss_pred EEEEEECCCCCCHHHHHHHHHHHHC--CCCCCEEEECCCCC
Q ss_conf 3899951588927999999999963--99754055335432
Q 005511 407 ASFIFSGPTGVGKSELAKALAAYYF--GSEEAMIRLDMSEF 445 (693)
Q Consensus 407 ~~ill~Gp~GtGKt~lA~~la~~l~--~~~~~~~~~~~~~~ 445 (693)
..+=+.||||+|||++...+...+- +.....+.+|.+.-
T Consensus 52 ~~igitG~pGaGKSTli~~l~~~~~~~g~~vaViavDpss~ 92 (323)
T d2qm8a1 52 IRVGITGVPGVGKSTTIDALGSLLTAAGHKVAVLAVDPSST 92 (323)
T ss_dssp EEEEEECCTTSCHHHHHHHHHHHHHHTTCCEEEEEECGGGG
T ss_pred EEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCH
T ss_conf 59861179988899999999998763687513443465547
No 389
>d1jjva_ c.37.1.1 (A:) Dephospho-CoA kinase {Haemophilus influenzae [TaxId: 727]}
Probab=88.10 E-value=0.13 Score=24.58 Aligned_cols=20 Identities=40% Similarity=0.463 Sum_probs=16.7
Q ss_pred EEEECCCCCHHHHHHHHHHH
Q ss_conf 07888999719999999999
Q 005511 66 PCLIGEPGVGKTAIAEGLAQ 85 (693)
Q Consensus 66 ilL~GppGtGKT~la~~la~ 85 (693)
+-++|++|+||||+++.+.+
T Consensus 5 IgITG~igSGKStv~~~l~~ 24 (205)
T d1jjva_ 5 VGLTGGIGSGKTTIANLFTD 24 (205)
T ss_dssp EEEECSTTSCHHHHHHHHHT
T ss_pred EEEECCCCCCHHHHHHHHHH
T ss_conf 99888887889999999998
No 390
>d2afhe1 c.37.1.10 (E:1-289) Nitrogenase iron protein {Azotobacter vinelandii [TaxId: 354]}
Probab=88.08 E-value=0.31 Score=21.98 Aligned_cols=38 Identities=26% Similarity=0.455 Sum_probs=29.1
Q ss_pred CEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCC
Q ss_conf 807888999719999999999975599999889966999865210
Q 005511 65 NPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLL 109 (693)
Q Consensus 65 ~ilL~GppGtGKT~la~~la~~l~~~~~~~~~~~~~~~~~~~~~~ 109 (693)
-+.++|.-|+||||++-.+|..+.. .|.++.-+++...
T Consensus 4 ~IaisgKGGVGKTT~a~NLA~~LA~-------~G~rVLlID~DpQ 41 (289)
T d2afhe1 4 QCAIYGKGGIGKSTTTQNLVAALAE-------MGKKVMIVGCDPK 41 (289)
T ss_dssp EEEEEECTTSSHHHHHHHHHHHHHH-------TTCCEEEEEECSS
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHH-------CCCCEEEEECCCC
T ss_conf 8999899987799999999999997-------8997899951899
No 391
>g1qhh.1 c.37.1.19 (A:,B:,C:,D:) DEXX box DNA helicase {Bacillus stearothermophilus, PcrA [TaxId: 1422]}
Probab=88.02 E-value=0.42 Score=21.08 Aligned_cols=40 Identities=20% Similarity=0.316 Sum_probs=25.0
Q ss_pred CCCCEEEECCCCCHHHHHH-HHHHHHHHCCCCCCCCCCCEEEEEE
Q ss_conf 9998078889997199999-9999997559999988996699986
Q 005511 62 TKNNPCLIGEPGVGKTAIA-EGLAQRIASGDVPDTIEGKKVITLD 105 (693)
Q Consensus 62 ~~~~ilL~GppGtGKT~la-~~la~~l~~~~~~~~~~~~~~~~~~ 105 (693)
.-.++++.|.||||||+.+ +.++..+.++..+ ..+++.+.
T Consensus 23 ~~~~~lV~A~AGSGKT~~lv~ri~~ll~~~~~~----p~~Il~lt 63 (623)
T g1qhh.1 23 TEGPLLIMAGAGSGKTRVLTHRIAYLMAEKHVA----PWNILAIT 63 (623)
T ss_dssp CSSCEEEEECTTSCHHHHHHHHHHHHHHTTCCC----GGGEEEEE
T ss_pred CCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCC----CCCEEEEE
T ss_conf 999989998186589999999999999809989----33099994
No 392
>d2fh5b1 c.37.1.8 (B:63-269) Signal recognition particle receptor beta-subunit {Mouse (Mus musculus) [TaxId: 10090]}
Probab=87.99 E-value=0.21 Score=23.20 Aligned_cols=23 Identities=26% Similarity=0.270 Sum_probs=19.8
Q ss_pred EEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 89995158892799999999996
Q 005511 408 SFIFSGPTGVGKSELAKALAAYY 430 (693)
Q Consensus 408 ~ill~Gp~GtGKt~lA~~la~~l 430 (693)
++++.|++|+|||++...+...-
T Consensus 2 ~V~ivG~~~~GKTsLl~~l~~~~ 24 (207)
T d2fh5b1 2 AVLFVGLCDSGKTLLFVRLLTGQ 24 (207)
T ss_dssp EEEEECSTTSSHHHHHHHHHHSC
T ss_pred EEEEECCCCCCHHHHHHHHHCCC
T ss_conf 89999999989899999998099
No 393
>d2a5ja1 c.37.1.8 (A:9-181) Rab2b {Human (Homo sapiens) [TaxId: 9606]}
Probab=87.98 E-value=0.19 Score=23.51 Aligned_cols=21 Identities=29% Similarity=0.600 Sum_probs=18.4
Q ss_pred EEEECCCCCHHHHHHHHHHHH
Q ss_conf 078889997199999999999
Q 005511 66 PCLIGEPGVGKTAIAEGLAQR 86 (693)
Q Consensus 66 ilL~GppGtGKT~la~~la~~ 86 (693)
+++.|+||+|||++++.+...
T Consensus 6 ivvvG~~~vGKTsli~r~~~~ 26 (173)
T d2a5ja1 6 YIIIGDTGVGKSCLLLQFTDK 26 (173)
T ss_dssp EEEESSTTSSHHHHHHHHHHS
T ss_pred EEEECCCCCCHHHHHHHHHCC
T ss_conf 999999993999999999629
No 394
>d1udxa2 c.37.1.8 (A:157-336) Obg GTP-binding protein middle domain {Thermus thermophilus [TaxId: 274]}
Probab=87.83 E-value=0.13 Score=24.49 Aligned_cols=18 Identities=33% Similarity=0.381 Sum_probs=9.1
Q ss_pred EEEECCCCCCHHHHHHHH
Q ss_conf 999515889279999999
Q 005511 409 FIFSGPTGVGKSELAKAL 426 (693)
Q Consensus 409 ill~Gp~GtGKt~lA~~l 426 (693)
+.|.|.|++|||++...|
T Consensus 4 VaivG~~nvGKSTLin~L 21 (180)
T d1udxa2 4 VGLVGYPNAGKSSLLAAM 21 (180)
T ss_dssp EEEECCGGGCHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHH
T ss_conf 999899999899999999
No 395
>d1p5zb_ c.37.1.1 (B:) Deoxycytidine kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=87.80 E-value=0.052 Score=27.32 Aligned_cols=23 Identities=22% Similarity=0.238 Sum_probs=13.0
Q ss_pred CEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 80788899971999999999997
Q 005511 65 NPCLIGEPGVGKTAIAEGLAQRI 87 (693)
Q Consensus 65 ~ilL~GppGtGKT~la~~la~~l 87 (693)
-+.+-|+.|+||||+++.+++.+
T Consensus 4 ~I~ieG~dGsGKST~~~~L~~~l 26 (241)
T d1p5zb_ 4 KISIEGNIAAGKSTFVNILKQLC 26 (241)
T ss_dssp EEEEECSTTSSHHHHHTTTGGGC
T ss_pred EEEEECCCCCCHHHHHHHHHHHH
T ss_conf 89998788877999999999997
No 396
>d1nrjb_ c.37.1.8 (B:) Signal recognition particle receptor beta-subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=87.80 E-value=0.22 Score=23.08 Aligned_cols=22 Identities=36% Similarity=0.584 Sum_probs=19.6
Q ss_pred EEEEECCCCCCHHHHHHHHHHH
Q ss_conf 8999515889279999999999
Q 005511 408 SFIFSGPTGVGKSELAKALAAY 429 (693)
Q Consensus 408 ~ill~Gp~GtGKt~lA~~la~~ 429 (693)
.++|.|+||+|||++...|...
T Consensus 5 ~V~lvG~~n~GKTSLln~l~~~ 26 (209)
T d1nrjb_ 5 SIIIAGPQNSGKTSLLTLLTTD 26 (209)
T ss_dssp EEEEECSTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHCC
T ss_conf 9999999998899999999679
No 397
>d2bv3a2 c.37.1.8 (A:7-282) Elongation factor G (EF-G), N-terminal (G) domain {Thermus thermophilus [TaxId: 274]}
Probab=87.78 E-value=0.51 Score=20.52 Aligned_cols=94 Identities=15% Similarity=0.177 Sum_probs=52.5
Q ss_pred EEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEECCCC----------------------CCCHHHHHHHCCCCCCCCCC
Q ss_conf 38999515889279999999999639975405533543----------------------22100011002899987676
Q 005511 407 ASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSE----------------------FMERHTVSKLIGSPPGYVGY 464 (693)
Q Consensus 407 ~~ill~Gp~GtGKt~lA~~la~~l~~~~~~~~~~~~~~----------------------~~~~~~~~~l~g~~~~~~g~ 464 (693)
.|+.+.|..|+|||+++.+|....-. -.....++-+. +..+...-.++ .-+||..+
T Consensus 7 Rni~i~gh~~~GKTtL~e~ll~~~g~-~~~~g~v~~~~~~~D~~~~E~~r~~si~~~~~~~~~~~~~~n~i-DtPG~~dF 84 (276)
T d2bv3a2 7 RNIGIAAHIDAGKTTTTERILYYTGR-IHKIGEVHEGAATMDFMEQERERGITITAAVTTCFWKDHRINII-DAPGHVDF 84 (276)
T ss_dssp EEEEEEECTTSCHHHHHHHHHHHHTS-SCC-------------------CCCCCCCSEEEEEETTEEEEEE-CCCSSSSC
T ss_pred EEEEEEECCCCCHHHHHHHHHHHCCC-CCCCCCEECCCEEEECCHHHHHCCCCCCCCEEEECCCCEEEEEE-CCCCHHHH
T ss_conf 29999958989989999999996485-34023365184698565888751886001123431598389995-27860226
Q ss_pred CCCCHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHC
Q ss_conf 7512266999809998999846742298899999997405
Q 005511 465 TEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILED 504 (693)
Q Consensus 465 ~~~~~l~~~~~~~~~~vl~iDEid~l~~~~~~~Ll~~le~ 504 (693)
. +.....++.+..+||++|-.+.........+...-+.
T Consensus 85 ~--~e~~~~l~~~D~avlVvda~~Gv~~~T~~~w~~a~~~ 122 (276)
T d2bv3a2 85 T--IEVERSMRVLDGAIVVFDSSQGVEPQSETVWRQAEKY 122 (276)
T ss_dssp S--TTHHHHHHHCCEEEEEEETTTSSCHHHHHHHHHHHTT
T ss_pred H--HHHHHHHHHHHHEEEECCCCCCCCHHHHHHHHHHHHC
T ss_conf 9--9999999963005773225677446699999999985
No 398
>d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]}
Probab=87.76 E-value=0.31 Score=21.99 Aligned_cols=24 Identities=29% Similarity=0.300 Sum_probs=14.1
Q ss_pred EEEECC-CCCHHHHHHHHHHHHHHC
Q ss_conf 078889-997199999999999755
Q 005511 66 PCLIGE-PGVGKTAIAEGLAQRIAS 89 (693)
Q Consensus 66 ilL~Gp-pGtGKT~la~~la~~l~~ 89 (693)
+++.|- +|+|||+++-.+|..+..
T Consensus 4 ~~i~gt~~GVGKTtvs~~La~aLa~ 28 (224)
T d1byia_ 4 YFVTGTDTEVGKTVASCALLQAAKA 28 (224)
T ss_dssp EEEEESSTTSCHHHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHH
T ss_conf 9999899994299999999999997
No 399
>d1ko7a2 c.91.1.2 (A:130-298) HPr kinase HprK C-terminal domain {Staphylococcus xylosus [TaxId: 1288]}
Probab=87.72 E-value=0.22 Score=23.05 Aligned_cols=25 Identities=28% Similarity=0.433 Sum_probs=20.9
Q ss_pred CCCCEEEECCCCCHHHHHHHHHHHH
Q ss_conf 9998078889997199999999999
Q 005511 62 TKNNPCLIGEPGVGKTAIAEGLAQR 86 (693)
Q Consensus 62 ~~~~ilL~GppGtGKT~la~~la~~ 86 (693)
...++||.|++|.|||+++-.+.+.
T Consensus 14 ~g~gvli~G~sg~GKS~la~~l~~~ 38 (169)
T d1ko7a2 14 YGVGVLITGDSGIGKSETALELIKR 38 (169)
T ss_dssp TTEEEEEEESTTSSHHHHHHHHHHT
T ss_pred CCEEEEEEECCCCCHHHHHHHHHHC
T ss_conf 9999999808999999999999984
No 400
>d1e0sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARF6 [TaxId: 9606]}
Probab=87.62 E-value=0.18 Score=23.55 Aligned_cols=27 Identities=22% Similarity=0.158 Sum_probs=21.2
Q ss_pred HCCCCCCEEEECCCCCHHHHHHHHHHH
Q ss_conf 039999807888999719999999999
Q 005511 59 GRRTKNNPCLIGEPGVGKTAIAEGLAQ 85 (693)
Q Consensus 59 ~~~~~~~ilL~GppGtGKT~la~~la~ 85 (693)
.....-.+++.|+||+|||++++.+..
T Consensus 8 ~~~k~~kIvlvG~~~vGKTSli~rl~~ 34 (173)
T d1e0sa_ 8 FGNKEMRILMLGLDAAGKTTILYKLKL 34 (173)
T ss_dssp HTTCCEEEEEEEETTSSHHHHHHHTTC
T ss_pred HCCCEEEEEEECCCCCCHHHHHHHHHC
T ss_conf 079747999999999878999999844
No 401
>d1egaa1 c.37.1.8 (A:4-182) GTPase Era, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=87.50 E-value=0.17 Score=23.76 Aligned_cols=22 Identities=32% Similarity=0.394 Sum_probs=15.7
Q ss_pred EEEEEECCCCCCHHHHHHHHHH
Q ss_conf 3899951588927999999999
Q 005511 407 ASFIFSGPTGVGKSELAKALAA 428 (693)
Q Consensus 407 ~~ill~Gp~GtGKt~lA~~la~ 428 (693)
+.+.|.|.||+|||++..+|..
T Consensus 6 ~~I~iiG~~nvGKSSLin~L~~ 27 (179)
T d1egaa1 6 GFIAIVGRPNVGKSTLLNKLLG 27 (179)
T ss_dssp EEEEEECSSSSSHHHHHHHHHT
T ss_pred CEEEEECCCCCCHHHHHHHHHC
T ss_conf 1999997999989999999958
No 402
>d1zj6a1 c.37.1.8 (A:2-178) ADP-ribosylation factor {Human (Homo sapiens), ARL5A [TaxId: 9606]}
Probab=87.45 E-value=0.53 Score=20.39 Aligned_cols=33 Identities=18% Similarity=0.372 Sum_probs=24.2
Q ss_pred HHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHH
Q ss_conf 9999970399998078889997199999999999
Q 005511 53 RVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQR 86 (693)
Q Consensus 53 ~l~~~l~~~~~~~ilL~GppGtGKT~la~~la~~ 86 (693)
.+..++. .+...+++.|.||+|||++++.+...
T Consensus 6 ~~~~~~~-~k~~kI~vvG~~~~GKSsLi~rl~~~ 38 (177)
T d1zj6a1 6 RIWRLFN-HQEHKVIIVGLDNAGKTTILYQFSMN 38 (177)
T ss_dssp HHHHHHT-TSCEEEEEEESTTSSHHHHHHHHHTT
T ss_pred HHHHHHC-CCEEEEEEECCCCCCHHHHHHHHHCC
T ss_conf 9997728-98579999999998989999999668
No 403
>d2fu5c1 c.37.1.8 (C:3-175) Rab8a {Mouse (Mus musculus) [TaxId: 10090]}
Probab=87.44 E-value=0.1 Score=25.37 Aligned_cols=20 Identities=25% Similarity=0.509 Sum_probs=12.5
Q ss_pred EEEECCCCCCHHHHHHHHHH
Q ss_conf 99951588927999999999
Q 005511 409 FIFSGPTGVGKSELAKALAA 428 (693)
Q Consensus 409 ill~Gp~GtGKt~lA~~la~ 428 (693)
+++.|.+|+|||++...+..
T Consensus 9 i~vvG~~~vGKTsLi~~l~~ 28 (173)
T d2fu5c1 9 LLLIGDSGVGKTCVLFRFSE 28 (173)
T ss_dssp EEEECCCCC-----------
T ss_pred EEEECCCCCCHHHHHHHHHH
T ss_conf 99999999499999999970
No 404
>d1q0ua_ c.37.1.19 (A:) Probable DEAD box RNA helicase YqfR {Bacillus stearothermophilus [TaxId: 1422]}
Probab=87.43 E-value=0.53 Score=20.38 Aligned_cols=15 Identities=33% Similarity=0.483 Sum_probs=9.7
Q ss_pred EEEEECCCCCCHHHH
Q ss_conf 899951588927999
Q 005511 408 SFIFSGPTGVGKSEL 422 (693)
Q Consensus 408 ~ill~Gp~GtGKt~l 422 (693)
++++..|+|+|||..
T Consensus 40 dvii~a~TGSGKTla 54 (209)
T d1q0ua_ 40 SMVGQSQTGTGKTHA 54 (209)
T ss_dssp CEEEECCSSHHHHHH
T ss_pred CEEEECCCCCCCCEE
T ss_conf 768662444213314
No 405
>d2f7sa1 c.37.1.8 (A:5-190) Rab27b {Human (Homo sapiens) [TaxId: 9606]}
Probab=87.28 E-value=0.2 Score=23.29 Aligned_cols=20 Identities=30% Similarity=0.468 Sum_probs=17.7
Q ss_pred EEEECCCCCHHHHHHHHHHH
Q ss_conf 07888999719999999999
Q 005511 66 PCLIGEPGVGKTAIAEGLAQ 85 (693)
Q Consensus 66 ilL~GppGtGKT~la~~la~ 85 (693)
+++.|++|+|||++++.+..
T Consensus 8 i~ivG~~~vGKTsLi~~l~~ 27 (186)
T d2f7sa1 8 LLALGDSGVGKTTFLYRYTD 27 (186)
T ss_dssp EEEESCTTSSHHHHHHHHHC
T ss_pred EEEECCCCCCHHHHHHHHHC
T ss_conf 99999999198999999961
No 406
>d1moza_ c.37.1.8 (A:) ADP-ribosylation factor {Baker's yeast (Saccharomyces cerevisiae), ARL1 [TaxId: 4932]}
Probab=87.22 E-value=0.1 Score=25.33 Aligned_cols=21 Identities=24% Similarity=0.417 Sum_probs=17.4
Q ss_pred EEEEEECCCCCCHHHHHHHHH
Q ss_conf 389995158892799999999
Q 005511 407 ASFIFSGPTGVGKSELAKALA 427 (693)
Q Consensus 407 ~~ill~Gp~GtGKt~lA~~la 427 (693)
.-+++.|++|+|||++.+.+.
T Consensus 18 ~KI~lvG~~~vGKTsLi~~l~ 38 (182)
T d1moza_ 18 LRILILGLDGAGKTTILYRLQ 38 (182)
T ss_dssp EEEEEEEETTSSHHHHHHHTC
T ss_pred EEEEEECCCCCCHHHHHHHHH
T ss_conf 899999999998899998873
No 407
>d1p6xa_ c.37.1.1 (A:) Thymidine kinase {Equine herpesvirus type 4 [TaxId: 10331]}
Probab=87.21 E-value=0.26 Score=22.48 Aligned_cols=24 Identities=25% Similarity=0.318 Sum_probs=21.3
Q ss_pred EEEECCCCCHHHHHHHHHHHHHHC
Q ss_conf 078889997199999999999755
Q 005511 66 PCLIGEPGVGKTAIAEGLAQRIAS 89 (693)
Q Consensus 66 ilL~GppGtGKT~la~~la~~l~~ 89 (693)
|.+-|+-|+||||+++.+++.+..
T Consensus 9 I~iEG~iGsGKSTl~~~L~~~l~~ 32 (333)
T d1p6xa_ 9 IYLDGVYGIGKSTTGRVMASAASG 32 (333)
T ss_dssp EEEECSTTSSHHHHHHHHHSGGGC
T ss_pred EEEECCCCCCHHHHHHHHHHHHCC
T ss_conf 999888667899999999998656
No 408
>d1veca_ c.37.1.19 (A:) DEAD box RNA helicase rck/p54 {Human (Homo sapiens) [TaxId: 9606]}
Probab=87.20 E-value=0.55 Score=20.29 Aligned_cols=14 Identities=29% Similarity=0.477 Sum_probs=7.8
Q ss_pred EEEEECCCCCCHHH
Q ss_conf 89995158892799
Q 005511 408 SFIFSGPTGVGKSE 421 (693)
Q Consensus 408 ~ill~Gp~GtGKt~ 421 (693)
+++...|+|+|||.
T Consensus 42 dvl~~a~TGsGKTl 55 (206)
T d1veca_ 42 DILARAKNGTGKSG 55 (206)
T ss_dssp CEEEECCSSSTTHH
T ss_pred CEEEECCCCCCCCC
T ss_conf 88744367400112
No 409
>d1p5zb_ c.37.1.1 (B:) Deoxycytidine kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=87.10 E-value=0.075 Score=26.24 Aligned_cols=23 Identities=22% Similarity=0.336 Sum_probs=21.2
Q ss_pred EEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 89995158892799999999996
Q 005511 408 SFIFSGPTGVGKSELAKALAAYY 430 (693)
Q Consensus 408 ~ill~Gp~GtGKt~lA~~la~~l 430 (693)
-+.+.|+.|+|||++++.|++.+
T Consensus 4 ~I~ieG~dGsGKST~~~~L~~~l 26 (241)
T d1p5zb_ 4 KISIEGNIAAGKSTFVNILKQLC 26 (241)
T ss_dssp EEEEECSTTSSHHHHHTTTGGGC
T ss_pred EEEEECCCCCCHHHHHHHHHHHH
T ss_conf 89998788877999999999997
No 410
>d1lnza2 c.37.1.8 (A:158-342) Obg GTP-binding protein middle domain {Bacillus subtilis [TaxId: 1423]}
Probab=87.01 E-value=0.16 Score=23.93 Aligned_cols=18 Identities=33% Similarity=0.372 Sum_probs=9.3
Q ss_pred EEEECCCCCCHHHHHHHH
Q ss_conf 999515889279999999
Q 005511 409 FIFSGPTGVGKSELAKAL 426 (693)
Q Consensus 409 ill~Gp~GtGKt~lA~~l 426 (693)
+.|.|+|++|||++..+|
T Consensus 4 VaiiG~~nvGKSSLin~L 21 (185)
T d1lnza2 4 VGLVGFPSVGKSTLLSVV 21 (185)
T ss_dssp EEEESSTTSSHHHHHHHS
T ss_pred EEEECCCCCCHHHHHHHH
T ss_conf 999899998799999999
No 411
>d1fzqa_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus musculus), ARL3 [TaxId: 10090]}
Probab=86.95 E-value=0.29 Score=22.16 Aligned_cols=21 Identities=33% Similarity=0.444 Sum_probs=18.2
Q ss_pred CEEEECCCCCHHHHHHHHHHH
Q ss_conf 807888999719999999999
Q 005511 65 NPCLIGEPGVGKTAIAEGLAQ 85 (693)
Q Consensus 65 ~ilL~GppGtGKT~la~~la~ 85 (693)
-+++.|+||+|||++++.+..
T Consensus 18 kI~vvG~~~vGKSsLi~~l~~ 38 (176)
T d1fzqa_ 18 RILLLGLDNAGKTTLLKQLAS 38 (176)
T ss_dssp EEEEEESTTSSHHHHHHHHCC
T ss_pred EEEEECCCCCCHHHHHHHHHC
T ss_conf 999999999899999999964
No 412
>d1nija1 c.37.1.10 (A:2-223) Hypothetical protein YjiA, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=86.94 E-value=0.28 Score=22.33 Aligned_cols=25 Identities=32% Similarity=0.531 Sum_probs=20.1
Q ss_pred CCEEEEEECCCCCCHHHHHHHHHHH
Q ss_conf 8438999515889279999999999
Q 005511 405 PIASFIFSGPTGVGKSELAKALAAY 429 (693)
Q Consensus 405 ~~~~ill~Gp~GtGKt~lA~~la~~ 429 (693)
|.+..++.|.-|+|||++.+.+.+.
T Consensus 2 ~iPv~iitGFLGaGKTTll~~lL~~ 26 (222)
T d1nija1 2 PIAVTLLTGFLGAGKTTLLRHILNE 26 (222)
T ss_dssp CEEEEEEEESSSSSCHHHHHHHHHS
T ss_pred CCCEEEEEECCCCCHHHHHHHHHHC
T ss_conf 9788998648889999999999856
No 413
>d1t9ha2 c.37.1.8 (A:68-298) Probable GTPase EngC (YjeQ), C-terminal domain {Bacillus subtilis [TaxId: 1423]}
Probab=86.85 E-value=0.061 Score=26.85 Aligned_cols=22 Identities=41% Similarity=0.729 Sum_probs=18.1
Q ss_pred EEEEECCCCCCHHHHHHHHHHH
Q ss_conf 8999515889279999999999
Q 005511 408 SFIFSGPTGVGKSELAKALAAY 429 (693)
Q Consensus 408 ~ill~Gp~GtGKt~lA~~la~~ 429 (693)
..+|.|++|+||+++..+|...
T Consensus 99 ~~vl~G~SGVGKSSLiN~L~~~ 120 (231)
T d1t9ha2 99 TTVFAGQSGVGKSSLLNAISPE 120 (231)
T ss_dssp EEEEEESHHHHHHHHHHHHCC-
T ss_pred EEEEECCCCCCHHHHHHHHCCH
T ss_conf 4999877873487898751517
No 414
>d1ksha_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus musculus), ARL2 [TaxId: 10090]}
Probab=86.84 E-value=0.2 Score=23.24 Aligned_cols=106 Identities=16% Similarity=0.161 Sum_probs=48.6
Q ss_pred CEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCC-CCCCCHHHHHHHHHHH-HHHHCCCEEEEEEC
Q ss_conf 807888999719999999999975599999889966999865210139-7446618999999999-99708984999916
Q 005511 65 NPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAG-TKYRGEFEERLKKLME-EIKQSDEIILFIDE 142 (693)
Q Consensus 65 ~ilL~GppGtGKT~la~~la~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~-~~~~~~~~iL~iDE 142 (693)
.+++.|++|+|||+|.+.+...-.....|+. +.....++.....-. ....|. ..++.... ........++++|-
T Consensus 4 ki~ivG~~~~GKTsLi~~l~~~~~~~~~~t~--~~~~~~~~~~~~~~~~~D~~G~--~~~~~~~~~~~~~~~~~i~v~d~ 79 (165)
T d1ksha_ 4 RLLMLGLDNAGKTTILKKFNGEDVDTISPTL--GFNIKTLEHRGFKLNIWDVGGQ--KSLRSYWRNYFESTDGLIWVVDS 79 (165)
T ss_dssp EEEEECSTTSSHHHHHHHHTTCCCSSCCCCS--SEEEEEEEETTEEEEEEEECCS--HHHHTTGGGGCTTCSEEEEEEET
T ss_pred EEEEECCCCCCHHHHHHHHCCCCCCCCCCEE--EEEEEECCCCCCCEEEEECCCC--HHHHHHHHHHHHHHHCCEEEEEC
T ss_conf 9999999998999999998089987302357--5304301134543036633760--55415777641210024022201
Q ss_pred CCHHHHCCCCCCHHHHHHHHHHHH---CCCCCEEEEEECHHH
Q ss_conf 003310899988476999883311---079817999743588
Q 005511 143 VHTLIGAGAAEGAIDAANILKPSL---ARGELQCIGATTLDE 181 (693)
Q Consensus 143 id~l~~~~~~~~~~~~~~~L~~~l---~~~~i~iI~~t~~~~ 181 (693)
.|.-.. .+....+...+ ......++...|..+
T Consensus 80 ~d~~~~-------~~~~~~~~~~~~~~~~~~~p~iiv~nK~D 114 (165)
T d1ksha_ 80 ADRQRM-------QDCQRELQSLLVEERLAGATLLIFANKQD 114 (165)
T ss_dssp TCGGGH-------HHHHHHHHHHHTCGGGTTCEEEEEEECTT
T ss_pred CCCHHH-------HHHHHHHHHHHHHCCCCCCCEEEEEECCC
T ss_conf 232227-------88887666543210157996699974145
No 415
>d1g6ha_ c.37.1.12 (A:) MJ1267 {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=86.77 E-value=0.13 Score=24.53 Aligned_cols=27 Identities=19% Similarity=0.359 Sum_probs=20.9
Q ss_pred CCCCCEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 999980788899971999999999997
Q 005511 61 RTKNNPCLIGEPGVGKTAIAEGLAQRI 87 (693)
Q Consensus 61 ~~~~~ilL~GppGtGKT~la~~la~~l 87 (693)
.+..-+-|.||.|+||||+++.++..+
T Consensus 28 ~~Gei~~liG~nGaGKSTLl~~i~Gl~ 54 (254)
T d1g6ha_ 28 NKGDVTLIIGPNGSGKSTLINVITGFL 54 (254)
T ss_dssp ETTCEEEEECSTTSSHHHHHHHHTTSS
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHCCC
T ss_conf 899799999999984999999997797
No 416
>g1xew.1 c.37.1.12 (X:,Y:) Smc head domain {Pyrococcus furiosus [TaxId: 2261]}
Probab=86.75 E-value=0.25 Score=22.64 Aligned_cols=43 Identities=19% Similarity=0.342 Sum_probs=30.2
Q ss_pred HHCCCCEEEEECCCCC-CCHHHHHHHHHHHHCCEEECCCCCEEECCCEEEEEECC
Q ss_conf 9809998999846742-29889999999740564637999833169769999538
Q 005511 474 VRRRPYTVVLFDEIEK-AHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSN 527 (693)
Q Consensus 474 ~~~~~~~vl~iDEid~-l~~~~~~~Ll~~le~g~~~~~~~~~~~~~~~i~I~tsn 527 (693)
.......++++||.+. +++..+..+...++.- ..++.+|++|.
T Consensus 242 ~~~~~~~~~~ide~e~~L~~~~~~~l~~~l~~~-----------~~~~Q~iitTh 285 (329)
T g1xew.1 242 QKFKPAPFYLFDEIDAHLDDANVKRVADLIKES-----------SKESQFIVITL 285 (329)
T ss_dssp HHHSCCSEEEEESTTTTSCHHHHHHHHHHHHHH-----------TTTSEEEEECC
T ss_pred HHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHH-----------CCCCEEEEEEC
T ss_conf 862365124455577622798999999999985-----------63780799968
No 417
>d1s2ma1 c.37.1.19 (A:46-251) Putative ATP-dependent RNA helicase DHH1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=86.64 E-value=0.59 Score=20.09 Aligned_cols=15 Identities=20% Similarity=0.421 Sum_probs=10.3
Q ss_pred EEEEECCCCCCHHHH
Q ss_conf 899951588927999
Q 005511 408 SFIFSGPTGVGKSEL 422 (693)
Q Consensus 408 ~ill~Gp~GtGKt~l 422 (693)
+++...|+|+|||..
T Consensus 40 dvi~~a~tGsGKTla 54 (206)
T d1s2ma1 40 DILARAKNGTGKTAA 54 (206)
T ss_dssp CEEEECCTTSCHHHH
T ss_pred CEEEECCCCCHHHHH
T ss_conf 889865876214444
No 418
>d2g9na1 c.37.1.19 (A:21-238) Initiation factor 4a {Human (Homo sapiens) [TaxId: 9606]}
Probab=86.62 E-value=0.59 Score=20.08 Aligned_cols=16 Identities=25% Similarity=0.389 Sum_probs=9.8
Q ss_pred EEEEECCCCCCHHHHH
Q ss_conf 8999515889279999
Q 005511 408 SFIFSGPTGVGKSELA 423 (693)
Q Consensus 408 ~ill~Gp~GtGKt~lA 423 (693)
+++...|+|+|||...
T Consensus 51 dvl~~a~TGsGKTlay 66 (218)
T d2g9na1 51 DVIAQAQSGTGKTATF 66 (218)
T ss_dssp CEEEECCTTSSHHHHH
T ss_pred CEEEECCCCHHHHHHH
T ss_conf 8899725625445543
No 419
>d1mkya2 c.37.1.8 (A:173-358) Probable GTPase Der, N-terminal and middle domains {Thermotoga maritima [TaxId: 2336]}
Probab=86.57 E-value=0.23 Score=22.89 Aligned_cols=20 Identities=35% Similarity=0.458 Sum_probs=11.8
Q ss_pred EEEEECCCCCCHHHHHHHHH
Q ss_conf 89995158892799999999
Q 005511 408 SFIFSGPTGVGKSELAKALA 427 (693)
Q Consensus 408 ~ill~Gp~GtGKt~lA~~la 427 (693)
.+.+.|.+|+|||++..+|.
T Consensus 10 kV~iiG~~~~GKSTLin~l~ 29 (186)
T d1mkya2 10 KVAIVGRPNVGKSTLFNAIL 29 (186)
T ss_dssp EEEEECSTTSSHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHH
T ss_conf 89999999999999999997
No 420
>d1x1ra1 c.37.1.8 (A:10-178) Ras-related protein M-Ras (XRas) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=86.56 E-value=0.59 Score=20.06 Aligned_cols=26 Identities=31% Similarity=0.448 Sum_probs=20.3
Q ss_pred CCEEEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 84389995158892799999999996
Q 005511 405 PIASFIFSGPTGVGKSELAKALAAYY 430 (693)
Q Consensus 405 ~~~~ill~Gp~GtGKt~lA~~la~~l 430 (693)
|.--+++.|++|+|||++...+...-
T Consensus 3 pt~Ki~lvG~~~vGKTsll~~~~~~~ 28 (169)
T d1x1ra1 3 PTYKLVVVGDGGVGKSALTIQFFQKI 28 (169)
T ss_dssp CEEEEEEECCTTSSHHHHHHHHHHSS
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHCC
T ss_conf 85799999989959899999997098
No 421
>d1osna_ c.37.1.1 (A:) Thymidine kinase {Varicella-zoster virus [TaxId: 10335]}
Probab=86.45 E-value=0.26 Score=22.54 Aligned_cols=24 Identities=38% Similarity=0.443 Sum_probs=21.2
Q ss_pred EEEECCCCCHHHHHHHHHHHHHHC
Q ss_conf 078889997199999999999755
Q 005511 66 PCLIGEPGVGKTAIAEGLAQRIAS 89 (693)
Q Consensus 66 ilL~GppGtGKT~la~~la~~l~~ 89 (693)
|.+-|+-|+||||+++.+++.+..
T Consensus 8 I~IEG~iGsGKSTl~~~L~~~l~~ 31 (331)
T d1osna_ 8 IYLDGAYGIGKTTAAEEFLHHFAI 31 (331)
T ss_dssp EEEEESSSSCTTHHHHHHHHTTTT
T ss_pred EEEECCCCCCHHHHHHHHHHHHHH
T ss_conf 999888778899999999998734
No 422
>d3raba_ c.37.1.8 (A:) Rab3a {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=86.40 E-value=0.26 Score=22.52 Aligned_cols=22 Identities=23% Similarity=0.301 Sum_probs=19.3
Q ss_pred EEEECCCCCCHHHHHHHHHHHH
Q ss_conf 9995158892799999999996
Q 005511 409 FIFSGPTGVGKSELAKALAAYY 430 (693)
Q Consensus 409 ill~Gp~GtGKt~lA~~la~~l 430 (693)
+++.|++|+|||++...+...-
T Consensus 8 i~vvG~~~vGKTsLi~~l~~~~ 29 (169)
T d3raba_ 8 ILIIGNSSVGKTSFLFRYADDS 29 (169)
T ss_dssp EEEECSTTSSHHHHHHHHHHSC
T ss_pred EEEECCCCCCHHHHHHHHHCCC
T ss_conf 9999999919899999997398
No 423
>d1zd9a1 c.37.1.8 (A:18-181) ADP-ribosylation factor {Human (Homo sapiens), ARL8A [TaxId: 9606]}
Probab=86.33 E-value=0.26 Score=22.48 Aligned_cols=23 Identities=26% Similarity=0.261 Sum_probs=19.3
Q ss_pred CEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 80788899971999999999997
Q 005511 65 NPCLIGEPGVGKTAIAEGLAQRI 87 (693)
Q Consensus 65 ~ilL~GppGtGKT~la~~la~~l 87 (693)
.++|.|++|+|||++.+.+...-
T Consensus 4 ki~i~G~~~~GKTsLl~~l~~~~ 26 (164)
T d1zd9a1 4 ELTLVGLQYSGKTTFVNVIASGQ 26 (164)
T ss_dssp EEEEECSTTSSHHHHHHHHHHSC
T ss_pred EEEEECCCCCCHHHHHHHHHCCC
T ss_conf 99999999989899999997197
No 424
>d1i2ma_ c.37.1.8 (A:) Ran {Human (Homo sapiens) [TaxId: 9606]}
Probab=86.18 E-value=0.095 Score=25.53 Aligned_cols=20 Identities=25% Similarity=0.516 Sum_probs=11.0
Q ss_pred EEEECCCCCCHHHHHHHHHH
Q ss_conf 99951588927999999999
Q 005511 409 FIFSGPTGVGKSELAKALAA 428 (693)
Q Consensus 409 ill~Gp~GtGKt~lA~~la~ 428 (693)
+++.|++|+|||++...+..
T Consensus 6 i~vvG~~~vGKTsli~~~~~ 25 (170)
T d1i2ma_ 6 LVLVGDGGTGKTTFVKRHLT 25 (170)
T ss_dssp EEEEECTTSSHHHHHHTTC-
T ss_pred EEEECCCCCCHHHHHHHHHH
T ss_conf 99999999088999999984
No 425
>d1z0fa1 c.37.1.8 (A:8-173) Rab14 {Human (Homo sapiens) [TaxId: 9606]}
Probab=86.07 E-value=0.28 Score=22.33 Aligned_cols=22 Identities=36% Similarity=0.519 Sum_probs=19.1
Q ss_pred EEEECCCCCCHHHHHHHHHHHH
Q ss_conf 9995158892799999999996
Q 005511 409 FIFSGPTGVGKSELAKALAAYY 430 (693)
Q Consensus 409 ill~Gp~GtGKt~lA~~la~~l 430 (693)
+++.|++|+|||++.+.+...-
T Consensus 7 ivlvG~~~vGKTsli~~~~~~~ 28 (166)
T d1z0fa1 7 YIIIGDMGVGKSCLLHQFTEKK 28 (166)
T ss_dssp EEEECSTTSSHHHHHHHHHHSC
T ss_pred EEEECCCCCCHHHHHHHHHHCC
T ss_conf 9999999949899999997299
No 426
>d1g6ha_ c.37.1.12 (A:) MJ1267 {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=86.05 E-value=0.23 Score=22.94 Aligned_cols=23 Identities=30% Similarity=0.639 Sum_probs=20.5
Q ss_pred EEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 89995158892799999999996
Q 005511 408 SFIFSGPTGVGKSELAKALAAYY 430 (693)
Q Consensus 408 ~ill~Gp~GtGKt~lA~~la~~l 430 (693)
.+-|.||.|+|||++.++++..+
T Consensus 32 i~~liG~nGaGKSTLl~~i~Gl~ 54 (254)
T d1g6ha_ 32 VTLIIGPNGSGKSTLINVITGFL 54 (254)
T ss_dssp EEEEECSTTSSHHHHHHHHTTSS
T ss_pred EEEEECCCCCCHHHHHHHHHCCC
T ss_conf 99999999984999999997797
No 427
>d2bmja1 c.37.1.8 (A:66-240) Centaurin gamma 1, G domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=86.02 E-value=0.29 Score=22.21 Aligned_cols=23 Identities=22% Similarity=0.167 Sum_probs=13.0
Q ss_pred EEEEEECCCCCCHHHHHHHHHHH
Q ss_conf 38999515889279999999999
Q 005511 407 ASFIFSGPTGVGKSELAKALAAY 429 (693)
Q Consensus 407 ~~ill~Gp~GtGKt~lA~~la~~ 429 (693)
.-+++.|++|+|||++...+...
T Consensus 6 ~ki~vlG~~~vGKTsLi~~~~~~ 28 (175)
T d2bmja1 6 LRLGVLGDARSGKSSLIHRFLTG 28 (175)
T ss_dssp EEEEEECCTTTTHHHHHHHHHHS
T ss_pred EEEEEECCCCCCHHHHHHHHHHC
T ss_conf 79999998997899999999719
No 428
>d1kaoa_ c.37.1.8 (A:) Rap2a {Human (Homo sapiens) [TaxId: 9606]}
Probab=85.86 E-value=0.29 Score=22.22 Aligned_cols=22 Identities=32% Similarity=0.434 Sum_probs=19.1
Q ss_pred EEEECCCCCCHHHHHHHHHHHH
Q ss_conf 9995158892799999999996
Q 005511 409 FIFSGPTGVGKSELAKALAAYY 430 (693)
Q Consensus 409 ill~Gp~GtGKt~lA~~la~~l 430 (693)
+++.|++|+|||++...+...-
T Consensus 6 i~lvG~~~vGKTsLi~r~~~~~ 27 (167)
T d1kaoa_ 6 VVVLGSGGVGKSALTVQFVTGT 27 (167)
T ss_dssp EEEECCTTSSHHHHHHHHHHSC
T ss_pred EEEECCCCCCHHHHHHHHHHCC
T ss_conf 9999989939999999997199
No 429
>d1z08a1 c.37.1.8 (A:17-183) Rab21 {Human (Homo sapiens) [TaxId: 9606]}
Probab=85.77 E-value=0.29 Score=22.17 Aligned_cols=22 Identities=23% Similarity=0.296 Sum_probs=19.0
Q ss_pred EEEECCCCCCHHHHHHHHHHHH
Q ss_conf 9995158892799999999996
Q 005511 409 FIFSGPTGVGKSELAKALAAYY 430 (693)
Q Consensus 409 ill~Gp~GtGKt~lA~~la~~l 430 (693)
+++.|.+|+|||++...+...-
T Consensus 6 ivlvG~~~vGKTsLi~r~~~~~ 27 (167)
T d1z08a1 6 VVLLGEGCVGKTSLVLRYCENK 27 (167)
T ss_dssp EEEECCTTSCHHHHHHHHHHCC
T ss_pred EEEECCCCCCHHHHHHHHHHCC
T ss_conf 9999999939899999998299
No 430
>d1r2qa_ c.37.1.8 (A:) Rab5a {Human (Homo sapiens) [TaxId: 9606]}
Probab=85.70 E-value=0.3 Score=22.13 Aligned_cols=22 Identities=27% Similarity=0.397 Sum_probs=19.2
Q ss_pred EEEECCCCCCHHHHHHHHHHHH
Q ss_conf 9995158892799999999996
Q 005511 409 FIFSGPTGVGKSELAKALAAYY 430 (693)
Q Consensus 409 ill~Gp~GtGKt~lA~~la~~l 430 (693)
+++.|++|+|||++...+...-
T Consensus 9 i~vvG~~~vGKTsLi~~l~~~~ 30 (170)
T d1r2qa_ 9 LVLLGESAVGKSSLVLRFVKGQ 30 (170)
T ss_dssp EEEECSTTSSHHHHHHHHHHSC
T ss_pred EEEECCCCCCHHHHHHHHHHCC
T ss_conf 9999999949899999998598
No 431
>d2f9la1 c.37.1.8 (A:8-182) Rab11b {Human (Homo sapiens) [TaxId: 9606]}
Probab=85.59 E-value=0.3 Score=22.08 Aligned_cols=21 Identities=33% Similarity=0.669 Sum_probs=18.6
Q ss_pred EEEECCCCCHHHHHHHHHHHH
Q ss_conf 078889997199999999999
Q 005511 66 PCLIGEPGVGKTAIAEGLAQR 86 (693)
Q Consensus 66 ilL~GppGtGKT~la~~la~~ 86 (693)
+++.|++|+|||++++.+...
T Consensus 7 i~vvG~~~vGKTsLi~~~~~~ 27 (175)
T d2f9la1 7 VVLIGDSGVGKSNLLSRFTRN 27 (175)
T ss_dssp EEEESSTTSSHHHHHHHHHHS
T ss_pred EEEECCCCCCHHHHHHHHHHC
T ss_conf 999999990989999999829
No 432
>d1l7vc_ c.37.1.12 (C:) ABC transporter involved in vitamin B12 uptake, BtuD {Escherichia coli [TaxId: 562]}
Probab=85.59 E-value=0.15 Score=24.21 Aligned_cols=25 Identities=28% Similarity=0.460 Sum_probs=18.1
Q ss_pred CCCCCEEEECCCCCHHHHHHHHHHH
Q ss_conf 9999807888999719999999999
Q 005511 61 RTKNNPCLIGEPGVGKTAIAEGLAQ 85 (693)
Q Consensus 61 ~~~~~ilL~GppGtGKT~la~~la~ 85 (693)
.+..-+-+.||.|+||||+.+.++.
T Consensus 23 ~~Gei~~iiG~nGaGKSTLl~~l~G 47 (231)
T d1l7vc_ 23 RAGEILHLVGPNGAGKSTLLARMAG 47 (231)
T ss_dssp ETTCEEECBCCTTSSHHHHHHHHHT
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHC
T ss_conf 4898999998999809999999948
No 433
>d1xpua3 c.37.1.11 (A:129-417) Transcription termination factor Rho, ATPase domain {Escherichia coli [TaxId: 562]}
Probab=85.59 E-value=0.61 Score=19.96 Aligned_cols=36 Identities=25% Similarity=0.384 Sum_probs=27.0
Q ss_pred HHHHHH-CCCCCCEEEECCCCCHHHHHHHHHHHHHHC
Q ss_conf 999970-399998078889997199999999999755
Q 005511 54 VVQILG-RRTKNNPCLIGEPGVGKTAIAEGLAQRIAS 89 (693)
Q Consensus 54 l~~~l~-~~~~~~ilL~GppGtGKT~la~~la~~l~~ 89 (693)
+...+. ...+.-+++.|++|+|||+++..+++....
T Consensus 33 ~ID~l~PigrGQr~~I~g~~g~GKT~l~~~i~~~~~~ 69 (289)
T d1xpua3 33 VLDLASPIGRGQRGLIVAPPKAGKTMLLQNIAQSIAY 69 (289)
T ss_dssp HHHHHSCCBTTCEEEEEECSSSSHHHHHHHHHHHHHH
T ss_pred EEEECCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHH
T ss_conf 5641256457875568679998878999999997751
No 434
>d2ew1a1 c.37.1.8 (A:4-174) Rab30 {Human (Homo sapiens) [TaxId: 9606]}
Probab=85.53 E-value=0.3 Score=22.07 Aligned_cols=22 Identities=27% Similarity=0.508 Sum_probs=19.3
Q ss_pred EEEECCCCCCHHHHHHHHHHHH
Q ss_conf 9995158892799999999996
Q 005511 409 FIFSGPTGVGKSELAKALAAYY 430 (693)
Q Consensus 409 ill~Gp~GtGKt~lA~~la~~l 430 (693)
+++.|++|+|||++.+.+...-
T Consensus 8 i~lvG~~~vGKTsLi~~l~~~~ 29 (171)
T d2ew1a1 8 IVLIGNAGVGKTCLVRRFTQGL 29 (171)
T ss_dssp EEEEESTTSSHHHHHHHHHHSS
T ss_pred EEEECCCCCCHHHHHHHHHHCC
T ss_conf 9999999919899999997299
No 435
>d2dy1a2 c.37.1.8 (A:8-274) Elongation factor G (EF-G), N-terminal (G) domain {Thermus thermophilus, EF-G-2 [TaxId: 274]}
Probab=85.49 E-value=0.67 Score=19.71 Aligned_cols=95 Identities=18% Similarity=0.196 Sum_probs=52.3
Q ss_pred EEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEECCC-CCCCHHHHH---------------------HHCCCCCCCCCC
Q ss_conf 3899951588927999999999963997540553354-322100011---------------------002899987676
Q 005511 407 ASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMS-EFMERHTVS---------------------KLIGSPPGYVGY 464 (693)
Q Consensus 407 ~~ill~Gp~GtGKt~lA~~la~~l~~~~~~~~~~~~~-~~~~~~~~~---------------------~l~g~~~~~~g~ 464 (693)
.++.+.|+.|+|||+++.+|..... .......++-+ .+.+..... .++ .-+|+...
T Consensus 3 RNv~iiGh~~~GKTtL~e~ll~~~g-~~~~~g~v~~g~~~~D~~~~E~~r~~ti~~~~~~~~~~~~~~n~i-DtPGh~dF 80 (267)
T d2dy1a2 3 RTVALVGHAGSGKTTLTEALLYKTG-AKERRGRVEEGTTTTDYTPEAKLHRTTVRTGVAPLLFRGHRVFLL-DAPGYGDF 80 (267)
T ss_dssp EEEEEEESTTSSHHHHHHHHHHHTT-SSSSCCCGGGTCCSSCCSHHHHHTTSCCSCEEEEEEETTEEEEEE-ECCCSGGG
T ss_pred EEEEEECCCCCCHHHHHHHHHHHCC-CCHHHCCCHHCCCCCCCHHHHHHHCCEEEEECCCCCCCCCCEEEE-CCCCHHHH
T ss_conf 0999994889809999999999709-755306622221135626988873876875102222343210688-06815543
Q ss_pred CCCCHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHCC
Q ss_conf 75122669998099989998467422988999999974056
Q 005511 465 TEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDG 505 (693)
Q Consensus 465 ~~~~~l~~~~~~~~~~vl~iDEid~l~~~~~~~Ll~~le~g 505 (693)
.+.....++.+...|+++|-.+...+.....+..+.+.+
T Consensus 81 --~~e~~~al~~~D~avlvvda~~Gv~~~t~~~~~~~~~~~ 119 (267)
T d2dy1a2 81 --VGEIRGALEAADAALVAVSAEAGVQVGTERAWTVAERLG 119 (267)
T ss_dssp --HHHHHHHHHHCSEEEEEEETTTCSCHHHHHHHHHHHHTT
T ss_pred --HHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHCC
T ss_conf --355654312467338984235774211578877655404
No 436
>d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]}
Probab=85.44 E-value=0.44 Score=20.93 Aligned_cols=35 Identities=20% Similarity=0.157 Sum_probs=29.1
Q ss_pred EEEEECC-CCCCHHHHHHHHHHHHCCCCCCEEEECC
Q ss_conf 8999515-8892799999999996399754055335
Q 005511 408 SFIFSGP-TGVGKSELAKALAAYYFGSEEAMIRLDM 442 (693)
Q Consensus 408 ~ill~Gp-~GtGKt~lA~~la~~l~~~~~~~~~~~~ 442 (693)
.+++.|- +|+|||+++-.||..+...+.....++.
T Consensus 3 ~~~i~gt~~GVGKTtvs~~La~aLa~~G~rVl~id~ 38 (224)
T d1byia_ 3 RYFVTGTDTEVGKTVASCALLQAAKAAGYRTAGYKP 38 (224)
T ss_dssp EEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEECS
T ss_pred EEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEECC
T ss_conf 199998999942999999999999977993999886
No 437
>d1cp2a_ c.37.1.10 (A:) Nitrogenase iron protein {Clostridium pasteurianum [TaxId: 1501]}
Probab=85.43 E-value=0.53 Score=20.37 Aligned_cols=38 Identities=16% Similarity=0.247 Sum_probs=32.1
Q ss_pred EEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCC
Q ss_conf 89995158892799999999996399754055335432
Q 005511 408 SFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEF 445 (693)
Q Consensus 408 ~ill~Gp~GtGKt~lA~~la~~l~~~~~~~~~~~~~~~ 445 (693)
.+.++|-=|+|||++|-.||..+-..+.+...+|+...
T Consensus 3 ~Iai~gKGGvGKTT~a~nLA~~LA~~G~rVllID~D~q 40 (269)
T d1cp2a_ 3 QVAIYGKGGIGKSTTTQNLTSGLHAMGKTIMVVGCDPK 40 (269)
T ss_dssp EEEEEECTTSSHHHHHHHHHHHHHTTTCCEEEEEECTT
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCC
T ss_conf 99998998577999999999999968995899963799
No 438
>d2j0sa1 c.37.1.19 (A:22-243) Probable ATP-dependent RNA helicase DDX48 {Human (Homo sapiens) [TaxId: 9606]}
Probab=85.25 E-value=0.68 Score=19.63 Aligned_cols=13 Identities=31% Similarity=0.555 Sum_probs=6.2
Q ss_pred EEEECCCCCCHHH
Q ss_conf 9995158892799
Q 005511 409 FIFSGPTGVGKSE 421 (693)
Q Consensus 409 ill~Gp~GtGKt~ 421 (693)
++...|+|+|||.
T Consensus 57 vi~~a~TGSGKTl 69 (222)
T d2j0sa1 57 VIAQSQSGTGKTA 69 (222)
T ss_dssp EEEECCTTSSHHH
T ss_pred EEEECCCCHHHHH
T ss_conf 6997574341454
No 439
>g1f2t.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=85.21 E-value=0.46 Score=20.82 Aligned_cols=24 Identities=21% Similarity=0.432 Sum_probs=20.3
Q ss_pred EEEECCCCCHHHHHHHHHHHHHHC
Q ss_conf 078889997199999999999755
Q 005511 66 PCLIGEPGVGKTAIAEGLAQRIAS 89 (693)
Q Consensus 66 ilL~GppGtGKT~la~~la~~l~~ 89 (693)
.+++||.|+|||++..+++-.+..
T Consensus 26 n~IvG~NGsGKStiL~Ai~~~l~~ 49 (292)
T g1f2t.1 26 NLIIGQNGSGKSSLLDAILVGLYW 49 (292)
T ss_dssp EEEECCTTSSHHHHHHHHHHHHHC
T ss_pred EEEECCCCCCHHHHHHHHHHHHCC
T ss_conf 999988998899999999998557
No 440
>g1xew.1 c.37.1.12 (X:,Y:) Smc head domain {Pyrococcus furiosus [TaxId: 2261]}
Probab=85.00 E-value=0.18 Score=23.58 Aligned_cols=24 Identities=21% Similarity=0.469 Sum_probs=20.4
Q ss_pred CEEEECCCCCHHHHHHHHHHHHHH
Q ss_conf 807888999719999999999975
Q 005511 65 NPCLIGEPGVGKTAIAEGLAQRIA 88 (693)
Q Consensus 65 ~ilL~GppGtGKT~la~~la~~l~ 88 (693)
--+|+||.|+|||++..|++-.+.
T Consensus 28 lnvi~G~NGsGKS~il~AI~~~L~ 51 (329)
T g1xew.1 28 FTAIVGANGSGKSNIGDAILFVLG 51 (329)
T ss_dssp EEEEEECTTSSSHHHHHHHHHHTT
T ss_pred EEEEECCCCCCHHHHHHHHHHHHC
T ss_conf 599999999889999999999977
No 441
>d2bmea1 c.37.1.8 (A:6-179) Rab4a {Human (Homo sapiens) [TaxId: 9606]}
Probab=84.75 E-value=0.35 Score=21.67 Aligned_cols=21 Identities=24% Similarity=0.529 Sum_probs=18.4
Q ss_pred EEEECCCCCHHHHHHHHHHHH
Q ss_conf 078889997199999999999
Q 005511 66 PCLIGEPGVGKTAIAEGLAQR 86 (693)
Q Consensus 66 ilL~GppGtGKT~la~~la~~ 86 (693)
+++.|.+|+|||++++.+...
T Consensus 8 I~lvG~~~vGKTsll~~~~~~ 28 (174)
T d2bmea1 8 FLVIGNAGTGKSCLLHQFIEK 28 (174)
T ss_dssp EEEEESTTSSHHHHHHHHHHS
T ss_pred EEEECCCCCCHHHHHHHHHHC
T ss_conf 999999990999999999709
No 442
>d2erya1 c.37.1.8 (A:10-180) r-Ras2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=84.68 E-value=0.35 Score=21.65 Aligned_cols=21 Identities=33% Similarity=0.501 Sum_probs=18.7
Q ss_pred EEEECCCCCCHHHHHHHHHHH
Q ss_conf 999515889279999999999
Q 005511 409 FIFSGPTGVGKSELAKALAAY 429 (693)
Q Consensus 409 ill~Gp~GtGKt~lA~~la~~ 429 (693)
+++.|.+|+|||++.+.+...
T Consensus 8 i~lvG~~~vGKTsLi~r~~~~ 28 (171)
T d2erya1 8 LVVVGGGGVGKSALTIQFIQS 28 (171)
T ss_dssp EEEEECTTSSHHHHHHHHHHS
T ss_pred EEEECCCCCCHHHHHHHHHHC
T ss_conf 999999997999999999739
No 443
>d1l7vc_ c.37.1.12 (C:) ABC transporter involved in vitamin B12 uptake, BtuD {Escherichia coli [TaxId: 562]}
Probab=84.41 E-value=0.27 Score=22.38 Aligned_cols=23 Identities=35% Similarity=0.547 Sum_probs=20.0
Q ss_pred EEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 89995158892799999999996
Q 005511 408 SFIFSGPTGVGKSELAKALAAYY 430 (693)
Q Consensus 408 ~ill~Gp~GtGKt~lA~~la~~l 430 (693)
.+-+.||.|+|||++.++++...
T Consensus 27 i~~iiG~nGaGKSTLl~~l~Gl~ 49 (231)
T d1l7vc_ 27 ILHLVGPNGAGKSTLLARMAGMT 49 (231)
T ss_dssp EEECBCCTTSSHHHHHHHHHTSC
T ss_pred EEEEECCCCCCHHHHHHHHHCCC
T ss_conf 99999899980999999994887
No 444
>d1hyqa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=84.29 E-value=0.75 Score=19.35 Aligned_cols=33 Identities=33% Similarity=0.474 Sum_probs=19.2
Q ss_pred EEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEC
Q ss_conf 7888999719999999999975599999889966999865
Q 005511 67 CLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDM 106 (693)
Q Consensus 67 lL~GppGtGKT~la~~la~~l~~~~~~~~~~~~~~~~~~~ 106 (693)
+..|..|+||||++..+|..+... +.++..+++
T Consensus 6 v~s~KGGvGKTtia~nlA~~la~~-------g~~VlliD~ 38 (232)
T d1hyqa_ 6 VASGKGGTGKTTITANLGVALAQL-------GHDVTIVDA 38 (232)
T ss_dssp EEESSSCSCHHHHHHHHHHHHHHT-------TCCEEEEEC
T ss_pred EECCCCCCHHHHHHHHHHHHHHHC-------CCCEEEEEC
T ss_conf 979999980999999999999968-------998999959
No 445
>g1ii8.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=84.28 E-value=0.41 Score=21.13 Aligned_cols=28 Identities=14% Similarity=0.264 Sum_probs=23.1
Q ss_pred CCCEEEEECCCC-CCCHHHHHHHHHHHHC
Q ss_conf 999899984674-2298899999997405
Q 005511 477 RPYTVVLFDEIE-KAHPDVFNMMLQILED 504 (693)
Q Consensus 477 ~~~~vl~iDEid-~l~~~~~~~Ll~~le~ 504 (693)
.+..+++|||.+ .++|..+..+...+.+
T Consensus 301 ~~~~illiDEpe~~Lh~~~~~~l~~~l~~ 329 (369)
T g1ii8.1 301 GEISLLILDEPTPYLDEERRRKLITIMER 329 (369)
T ss_dssp SSCSEEEEECCSSSSCSHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCCCCHHHHHHHHHHHHH
T ss_conf 89988999788777899999999999999
No 446
>d1m7ba_ c.37.1.8 (A:) RhoE (RND3) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=84.25 E-value=0.38 Score=21.43 Aligned_cols=22 Identities=23% Similarity=0.382 Sum_probs=19.2
Q ss_pred EEEECCCCCCHHHHHHHHHHHH
Q ss_conf 9995158892799999999996
Q 005511 409 FIFSGPTGVGKSELAKALAAYY 430 (693)
Q Consensus 409 ill~Gp~GtGKt~lA~~la~~l 430 (693)
++|.|++|+|||++.+.+...-
T Consensus 5 ivliG~~~vGKTsli~r~~~~~ 26 (179)
T d1m7ba_ 5 IVVVGDSQCGKTALLHVFAKDC 26 (179)
T ss_dssp EEEEESTTSSHHHHHHHHHHSC
T ss_pred EEEECCCCCCHHHHHHHHHHCC
T ss_conf 9999999959899999997299
No 447
>d1moza_ c.37.1.8 (A:) ADP-ribosylation factor {Baker's yeast (Saccharomyces cerevisiae), ARL1 [TaxId: 4932]}
Probab=84.25 E-value=0.61 Score=19.97 Aligned_cols=28 Identities=29% Similarity=0.353 Sum_probs=21.5
Q ss_pred HCCCCCCEEEECCCCCHHHHHHHHHHHH
Q ss_conf 0399998078889997199999999999
Q 005511 59 GRRTKNNPCLIGEPGVGKTAIAEGLAQR 86 (693)
Q Consensus 59 ~~~~~~~ilL~GppGtGKT~la~~la~~ 86 (693)
...+.--+++.|++|+|||++++.+...
T Consensus 13 ~~~k~~KI~lvG~~~vGKTsLi~~l~~~ 40 (182)
T d1moza_ 13 GSNKELRILILGLDGAGKTTILYRLQIG 40 (182)
T ss_dssp TCSSCEEEEEEEETTSSHHHHHHHTCCS
T ss_pred CCCCEEEEEEECCCCCCHHHHHHHHHCC
T ss_conf 7896689999999999889999887338
No 448
>d1vg8a_ c.37.1.8 (A:) Rab7 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=84.14 E-value=0.39 Score=21.35 Aligned_cols=21 Identities=33% Similarity=0.533 Sum_probs=18.7
Q ss_pred EEEECCCCCCHHHHHHHHHHH
Q ss_conf 999515889279999999999
Q 005511 409 FIFSGPTGVGKSELAKALAAY 429 (693)
Q Consensus 409 ill~Gp~GtGKt~lA~~la~~ 429 (693)
+++.|.+|+|||++...+...
T Consensus 5 v~vvG~~~vGKSSLi~~l~~~ 25 (184)
T d1vg8a_ 5 VIILGDSGVGKTSLMNQYVNK 25 (184)
T ss_dssp EEEECCTTSSHHHHHHHHHHS
T ss_pred EEEECCCCCCHHHHHHHHHHC
T ss_conf 999999991989999999719
No 449
>d1kmqa_ c.37.1.8 (A:) RhoA {Human (Homo sapiens) [TaxId: 9606]}
Probab=84.08 E-value=0.39 Score=21.35 Aligned_cols=23 Identities=17% Similarity=0.268 Sum_probs=19.1
Q ss_pred CEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 80788899971999999999997
Q 005511 65 NPCLIGEPGVGKTAIAEGLAQRI 87 (693)
Q Consensus 65 ~ilL~GppGtGKT~la~~la~~l 87 (693)
-+++.|++|+|||+|++.+...-
T Consensus 4 KivvvG~~~vGKTsLi~~~~~~~ 26 (177)
T d1kmqa_ 4 KLVIVGDGACGKTCLLIVNSKDQ 26 (177)
T ss_dssp EEEEEESTTSSHHHHHHHHHHSC
T ss_pred EEEEECCCCCCHHHHHHHHHHCC
T ss_conf 99999989938899999997199
No 450
>d1mkya1 c.37.1.8 (A:2-172) Probable GTPase Der, N-terminal and middle domains {Thermotoga maritima [TaxId: 2336]}
Probab=84.03 E-value=0.4 Score=21.22 Aligned_cols=21 Identities=33% Similarity=0.504 Sum_probs=18.7
Q ss_pred EEEEECCCCCCHHHHHHHHHH
Q ss_conf 899951588927999999999
Q 005511 408 SFIFSGPTGVGKSELAKALAA 428 (693)
Q Consensus 408 ~ill~Gp~GtGKt~lA~~la~ 428 (693)
.+.+.|++|+|||++.+.|..
T Consensus 2 ~V~liG~~n~GKSsLi~~L~~ 22 (171)
T d1mkya1 2 TVLIVGRPNVGKSTLFNKLVK 22 (171)
T ss_dssp EEEEECCTTSSHHHHHHHHHC
T ss_pred EEEEECCCCCCHHHHHHHHHC
T ss_conf 899999999989999999967
No 451
>d1ky3a_ c.37.1.8 (A:) Rab-related protein ypt7p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=84.00 E-value=0.39 Score=21.29 Aligned_cols=21 Identities=33% Similarity=0.512 Sum_probs=18.4
Q ss_pred EEEECCCCCCHHHHHHHHHHH
Q ss_conf 999515889279999999999
Q 005511 409 FIFSGPTGVGKSELAKALAAY 429 (693)
Q Consensus 409 ill~Gp~GtGKt~lA~~la~~ 429 (693)
+++.|++|+|||++...+...
T Consensus 5 i~~vG~~~vGKSsLi~~~~~~ 25 (175)
T d1ky3a_ 5 VIILGDSGVGKTSLMHRYVND 25 (175)
T ss_dssp EEEECCTTSSHHHHHHHHHHS
T ss_pred EEEECCCCCCHHHHHHHHHCC
T ss_conf 999999996989999999709
No 452
>d2g6ba1 c.37.1.8 (A:58-227) Rab26 {Human (Homo sapiens) [TaxId: 9606]}
Probab=83.88 E-value=0.4 Score=21.22 Aligned_cols=21 Identities=29% Similarity=0.431 Sum_probs=18.5
Q ss_pred EEEECCCCCCHHHHHHHHHHH
Q ss_conf 999515889279999999999
Q 005511 409 FIFSGPTGVGKSELAKALAAY 429 (693)
Q Consensus 409 ill~Gp~GtGKt~lA~~la~~ 429 (693)
+++.|++|+|||++.+.+...
T Consensus 9 i~vvG~~~vGKTsli~~~~~~ 29 (170)
T d2g6ba1 9 VMLVGDSGVGKTCLLVRFKDG 29 (170)
T ss_dssp EEEECSTTSSHHHHHHHHHHS
T ss_pred EEEECCCCCCHHHHHHHHHHC
T ss_conf 999999992999999999719
No 453
>d1z06a1 c.37.1.8 (A:32-196) Rab-33b {Mouse (Mus musculus) [TaxId: 10090]}
Probab=83.84 E-value=0.4 Score=21.21 Aligned_cols=21 Identities=33% Similarity=0.407 Sum_probs=18.8
Q ss_pred EEEECCCCCCHHHHHHHHHHH
Q ss_conf 999515889279999999999
Q 005511 409 FIFSGPTGVGKSELAKALAAY 429 (693)
Q Consensus 409 ill~Gp~GtGKt~lA~~la~~ 429 (693)
+++.|++|+|||++...+...
T Consensus 5 v~liG~~~vGKTsLl~~~~~~ 25 (165)
T d1z06a1 5 IIVIGDSNVGKTCLTYRFCAG 25 (165)
T ss_dssp EEEECCTTSSHHHHHHHHHHS
T ss_pred EEEECCCCCCHHHHHHHHHHC
T ss_conf 999999992989999999739
No 454
>d2bcgy1 c.37.1.8 (Y:3-196) GTPase Ytp1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=83.84 E-value=0.4 Score=21.24 Aligned_cols=22 Identities=32% Similarity=0.528 Sum_probs=18.9
Q ss_pred EEEECCCCCHHHHHHHHHHHHH
Q ss_conf 0788899971999999999997
Q 005511 66 PCLIGEPGVGKTAIAEGLAQRI 87 (693)
Q Consensus 66 ilL~GppGtGKT~la~~la~~l 87 (693)
+++.|++|+|||++++.+...-
T Consensus 9 ivvvG~~~vGKTsli~~l~~~~ 30 (194)
T d2bcgy1 9 LLLIGNSGVGKSCLLLRFSDDT 30 (194)
T ss_dssp EEEEESTTSSHHHHHHHHHHCC
T ss_pred EEEECCCCCCHHHHHHHHHHCC
T ss_conf 9999999909899999996198
No 455
>d1wp9a1 c.37.1.19 (A:1-200) putative ATP-dependent RNA helicase PF2015 {Pyrococcus furiosus [TaxId: 2261]}
Probab=83.83 E-value=0.42 Score=21.07 Aligned_cols=34 Identities=26% Similarity=0.425 Sum_probs=21.8
Q ss_pred EEEEECCCCCCHHHHHHHHHHHHC-CCCCCEEEEC
Q ss_conf 899951588927999999999963-9975405533
Q 005511 408 SFIFSGPTGVGKSELAKALAAYYF-GSEEAMIRLD 441 (693)
Q Consensus 408 ~ill~Gp~GtGKt~lA~~la~~l~-~~~~~~~~~~ 441 (693)
+.++.+|+|+|||.++-.++.... ..+...+.+-
T Consensus 25 n~lv~~pTGsGKT~i~~~~~~~~~~~~~~~il~i~ 59 (200)
T d1wp9a1 25 NCLIVLPTGLGKTLIAMMIAEYRLTKYGGKVLMLA 59 (200)
T ss_dssp CEEEECCTTSCHHHHHHHHHHHHHHHSCSCEEEEC
T ss_pred CEEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEC
T ss_conf 96999189972889999999999970698189973
No 456
>d1yzqa1 c.37.1.8 (A:14-177) Rab6 {Human (Homo sapiens) [TaxId: 9606]}
Probab=83.82 E-value=0.4 Score=21.23 Aligned_cols=21 Identities=29% Similarity=0.483 Sum_probs=18.6
Q ss_pred EEEECCCCCCHHHHHHHHHHH
Q ss_conf 999515889279999999999
Q 005511 409 FIFSGPTGVGKSELAKALAAY 429 (693)
Q Consensus 409 ill~Gp~GtGKt~lA~~la~~ 429 (693)
+++.|.+|+|||++.+.+...
T Consensus 3 v~vvG~~~vGKTsLi~r~~~~ 23 (164)
T d1yzqa1 3 LVFLGEQSVGKTSLITRFMYD 23 (164)
T ss_dssp EEEEESTTSSHHHHHHHHHHS
T ss_pred EEEECCCCCCHHHHHHHHHHC
T ss_conf 999998990989999999849
No 457
>d1xtqa1 c.37.1.8 (A:3-169) GTP-binding protein RheB {Human (Homo sapiens) [TaxId: 9606]}
Probab=83.67 E-value=0.41 Score=21.16 Aligned_cols=22 Identities=18% Similarity=0.395 Sum_probs=19.1
Q ss_pred CEEEECCCCCHHHHHHHHHHHH
Q ss_conf 8078889997199999999999
Q 005511 65 NPCLIGEPGVGKTAIAEGLAQR 86 (693)
Q Consensus 65 ~ilL~GppGtGKT~la~~la~~ 86 (693)
-+++.|++|+|||+|++.+...
T Consensus 6 Kv~liG~~~vGKTsLl~~~~~~ 27 (167)
T d1xtqa1 6 KIAILGYRSVGKSSLTIQFVEG 27 (167)
T ss_dssp EEEEEESTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHHC
T ss_conf 8999998992989999999719
No 458
>d2cxxa1 c.37.1.8 (A:2-185) GTP-binding protein engB {Pyrococcus horikoshii [TaxId: 53953]}
Probab=83.56 E-value=0.43 Score=21.03 Aligned_cols=21 Identities=43% Similarity=0.684 Sum_probs=18.7
Q ss_pred EEEEECCCCCCHHHHHHHHHH
Q ss_conf 899951588927999999999
Q 005511 408 SFIFSGPTGVGKSELAKALAA 428 (693)
Q Consensus 408 ~ill~Gp~GtGKt~lA~~la~ 428 (693)
.++|.|+||+|||++..+|..
T Consensus 2 ~I~lvG~~nvGKSsLin~l~~ 22 (184)
T d2cxxa1 2 TIIFAGRSNVGKSTLIYRLTG 22 (184)
T ss_dssp EEEEEEBTTSSHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHC
T ss_conf 899999999889999999968
No 459
>d2gjsa1 c.37.1.8 (A:91-258) Rad {Human (Homo sapiens) [TaxId: 9606]}
Probab=83.52 E-value=0.39 Score=21.30 Aligned_cols=21 Identities=38% Similarity=0.667 Sum_probs=18.2
Q ss_pred EEEECCCCCCHHHHHHHHHHH
Q ss_conf 999515889279999999999
Q 005511 409 FIFSGPTGVGKSELAKALAAY 429 (693)
Q Consensus 409 ill~Gp~GtGKt~lA~~la~~ 429 (693)
+++.|++|+|||++.+.+...
T Consensus 4 i~lvG~~~vGKTsLi~~~~~~ 24 (168)
T d2gjsa1 4 VLLLGAPGVGKSALARIFGGV 24 (168)
T ss_dssp EEEECCTTSSHHHHHHHHHTC
T ss_pred EEEECCCCCCHHHHHHHHHCC
T ss_conf 999898993999999998188
No 460
>d2erxa1 c.37.1.8 (A:6-176) di-Ras2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=83.50 E-value=0.39 Score=21.29 Aligned_cols=21 Identities=33% Similarity=0.377 Sum_probs=17.9
Q ss_pred EEEECCCCCCHHHHHHHHHHH
Q ss_conf 999515889279999999999
Q 005511 409 FIFSGPTGVGKSELAKALAAY 429 (693)
Q Consensus 409 ill~Gp~GtGKt~lA~~la~~ 429 (693)
+++.|.+|+|||++...+...
T Consensus 5 i~viG~~~vGKTsLi~r~~~~ 25 (171)
T d2erxa1 5 VAVFGAGGVGKSSLVLRFVKG 25 (171)
T ss_dssp EEEECCTTSSHHHHHHHHHTC
T ss_pred EEEECCCCCCHHHHHHHHHHC
T ss_conf 999998997989999999709
No 461
>d2atxa1 c.37.1.8 (A:9-193) RhoQ {Human (Homo sapiens) [TaxId: 9606]}
Probab=83.48 E-value=0.34 Score=21.73 Aligned_cols=23 Identities=26% Similarity=0.421 Sum_probs=19.3
Q ss_pred CEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 80788899971999999999997
Q 005511 65 NPCLIGEPGVGKTAIAEGLAQRI 87 (693)
Q Consensus 65 ~ilL~GppGtGKT~la~~la~~l 87 (693)
-+++.|.+|+|||++++.+...-
T Consensus 11 Ki~lvG~~~vGKTsLi~r~~~~~ 33 (185)
T d2atxa1 11 KCVVVGDGAVGKTCLLMSYANDA 33 (185)
T ss_dssp EEEEEECTTSSHHHHHHHHHHSS
T ss_pred EEEEECCCCCCHHHHHHHHHHCC
T ss_conf 99999999989999999996499
No 462
>d2g3ya1 c.37.1.8 (A:73-244) GTP-binding protein GEM {Human (Homo sapiens) [TaxId: 9606]}
Probab=83.47 E-value=0.39 Score=21.28 Aligned_cols=21 Identities=43% Similarity=0.661 Sum_probs=18.2
Q ss_pred EEEECCCCCCHHHHHHHHHHH
Q ss_conf 999515889279999999999
Q 005511 409 FIFSGPTGVGKSELAKALAAY 429 (693)
Q Consensus 409 ill~Gp~GtGKt~lA~~la~~ 429 (693)
+++.|++|+|||++...+...
T Consensus 6 v~lvG~~~vGKTsLi~~~~~~ 26 (172)
T d2g3ya1 6 VVLIGEQGVGKSTLANIFAGV 26 (172)
T ss_dssp EEEECCTTSSHHHHHHHHHCC
T ss_pred EEEECCCCCCHHHHHHHHHHC
T ss_conf 999998992999999999728
No 463
>d1puia_ c.37.1.8 (A:) Probable GTPase EngB {Escherichia coli [TaxId: 562]}
Probab=83.37 E-value=0.16 Score=24.02 Aligned_cols=21 Identities=29% Similarity=0.482 Sum_probs=12.8
Q ss_pred EEEEEECCCCCCHHHHHHHHH
Q ss_conf 389995158892799999999
Q 005511 407 ASFIFSGPTGVGKSELAKALA 427 (693)
Q Consensus 407 ~~ill~Gp~GtGKt~lA~~la 427 (693)
..+.|.|+|++|||++..+|.
T Consensus 17 ~~I~lvG~~NvGKSSL~n~L~ 37 (188)
T d1puia_ 17 IEVAFAGRSNAGKSSALNTLT 37 (188)
T ss_dssp EEEEEEECTTSSHHHHHTTTC
T ss_pred CEEEEECCCCCCHHHHHHHHH
T ss_conf 789998899998999999985
No 464
>d1z0ja1 c.37.1.8 (A:2-168) Rab-22a {Mouse (Mus musculus) [TaxId: 10090]}
Probab=83.27 E-value=0.44 Score=20.96 Aligned_cols=23 Identities=35% Similarity=0.708 Sum_probs=19.3
Q ss_pred CEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 80788899971999999999997
Q 005511 65 NPCLIGEPGVGKTAIAEGLAQRI 87 (693)
Q Consensus 65 ~ilL~GppGtGKT~la~~la~~l 87 (693)
-+++.|.+|+|||++++.+.+.-
T Consensus 6 Ki~lvG~~~vGKTsli~rl~~~~ 28 (167)
T d1z0ja1 6 KVCLLGDTGVGKSSIMWRFVEDS 28 (167)
T ss_dssp EEEEECCTTSSHHHHHHHHHHSC
T ss_pred EEEEECCCCCCHHHHHHHHHHCC
T ss_conf 89999989949999999997398
No 465
>d1c1ya_ c.37.1.8 (A:) Rap1A {Human (Homo sapiens) [TaxId: 9606]}
Probab=83.26 E-value=0.44 Score=20.94 Aligned_cols=22 Identities=32% Similarity=0.469 Sum_probs=19.2
Q ss_pred EEEECCCCCCHHHHHHHHHHHH
Q ss_conf 9995158892799999999996
Q 005511 409 FIFSGPTGVGKSELAKALAAYY 430 (693)
Q Consensus 409 ill~Gp~GtGKt~lA~~la~~l 430 (693)
+++.|.+|+|||++.+.+...-
T Consensus 6 ivvvG~~~vGKTsli~r~~~~~ 27 (167)
T d1c1ya_ 6 LVVLGSGGVGKSALTVQFVQGI 27 (167)
T ss_dssp EEEECSTTSSHHHHHHHHHHCC
T ss_pred EEEECCCCCCHHHHHHHHHCCC
T ss_conf 9999989989999999997098
No 466
>d1wf3a1 c.37.1.8 (A:3-180) GTPase Era, N-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=83.25 E-value=0.49 Score=20.63 Aligned_cols=23 Identities=30% Similarity=0.354 Sum_probs=19.8
Q ss_pred EEEEEECCCCCCHHHHHHHHHHH
Q ss_conf 38999515889279999999999
Q 005511 407 ASFIFSGPTGVGKSELAKALAAY 429 (693)
Q Consensus 407 ~~ill~Gp~GtGKt~lA~~la~~ 429 (693)
+.+.+.|.+|+|||++..+|...
T Consensus 6 ~~I~lvG~~~~GKSSLin~l~~~ 28 (178)
T d1wf3a1 6 GFVAIVGKPNVGKSTLLNNLLGV 28 (178)
T ss_dssp EEEEEECSTTSSHHHHHHHHHTS
T ss_pred CEEEEECCCCCCHHHHHHHHHCC
T ss_conf 69999999999999999999688
No 467
>d1g16a_ c.37.1.8 (A:) Rab-related protein Sec4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=83.24 E-value=0.44 Score=20.97 Aligned_cols=22 Identities=32% Similarity=0.539 Sum_probs=19.0
Q ss_pred EEEECCCCCHHHHHHHHHHHHH
Q ss_conf 0788899971999999999997
Q 005511 66 PCLIGEPGVGKTAIAEGLAQRI 87 (693)
Q Consensus 66 ilL~GppGtGKT~la~~la~~l 87 (693)
+++.|++|+|||++++.+...-
T Consensus 5 i~vvG~~~vGKTSli~~l~~~~ 26 (166)
T d1g16a_ 5 ILLIGDSGVGKSCLLVRFVEDK 26 (166)
T ss_dssp EEEEESTTSSHHHHHHHHHHCC
T ss_pred EEEECCCCCCHHHHHHHHHHCC
T ss_conf 9999999967899999998688
No 468
>d1u0la2 c.37.1.8 (A:69-293) Probable GTPase EngC (YjeQ), C-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=83.13 E-value=0.43 Score=21.04 Aligned_cols=36 Identities=22% Similarity=0.382 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 999999999703999980788899971999999999997
Q 005511 49 PQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRI 87 (693)
Q Consensus 49 ~~~~~l~~~l~~~~~~~ilL~GppGtGKT~la~~la~~l 87 (693)
.-++.|...+. ..-.+|.|++|+|||||++++....
T Consensus 84 ~g~~~L~~~l~---~kt~~~~G~SGVGKSTLiN~L~~~~ 119 (225)
T d1u0la2 84 MGIEELKEYLK---GKISTMAGLSGVGKSSLLNAINPGL 119 (225)
T ss_dssp TTHHHHHHHHS---SSEEEEECSTTSSHHHHHHHHSTTC
T ss_pred HHHHHHHHHHC---CCEEEEECCCCCCHHHHHHHHCCHH
T ss_conf 55766999956---9808997889877888877305355
No 469
>d1xzpa2 c.37.1.8 (A:212-371) TrmE GTPase domain {Thermotoga maritima [TaxId: 2336]}
Probab=83.08 E-value=0.12 Score=24.80 Aligned_cols=21 Identities=29% Similarity=0.635 Sum_probs=11.4
Q ss_pred EEEECCCCCHHHHHHHHHHHH
Q ss_conf 078889997199999999999
Q 005511 66 PCLIGEPGVGKTAIAEGLAQR 86 (693)
Q Consensus 66 ilL~GppGtGKT~la~~la~~ 86 (693)
+.|.|.||+|||++++++...
T Consensus 3 I~liG~~n~GKSSLin~l~g~ 23 (160)
T d1xzpa2 3 MVIVGKPNVGKSTLLNRLLNE 23 (160)
T ss_dssp EEEECCHHHHTCHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHCC
T ss_conf 999999999999999999589
No 470
>d1u8za_ c.37.1.8 (A:) Ras-related protein RalA {Cotton-top tamarin (Saguinus oedipus) [TaxId: 9490]}
Probab=83.06 E-value=0.56 Score=20.22 Aligned_cols=25 Identities=32% Similarity=0.449 Sum_probs=20.4
Q ss_pred CCEEEEEECCCCCCHHHHHHHHHHH
Q ss_conf 8438999515889279999999999
Q 005511 405 PIASFIFSGPTGVGKSELAKALAAY 429 (693)
Q Consensus 405 ~~~~ill~Gp~GtGKt~lA~~la~~ 429 (693)
|..=+++.|.+|+|||++...+...
T Consensus 3 ~~~KivlvG~~~vGKTsli~~~~~~ 27 (168)
T d1u8za_ 3 ALHKVIMVGSGGVGKSALTLQFMYD 27 (168)
T ss_dssp CEEEEEEECSTTSSHHHHHHHHHHS
T ss_pred CEEEEEEECCCCCCHHHHHHHHHHC
T ss_conf 5269999998995889999999729
No 471
>d1p6xa_ c.37.1.1 (A:) Thymidine kinase {Equine herpesvirus type 4 [TaxId: 10331]}
Probab=83.01 E-value=0.31 Score=21.97 Aligned_cols=23 Identities=26% Similarity=0.450 Sum_probs=18.2
Q ss_pred EEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 89995158892799999999996
Q 005511 408 SFIFSGPTGVGKSELAKALAAYY 430 (693)
Q Consensus 408 ~ill~Gp~GtGKt~lA~~la~~l 430 (693)
-|.|-|+-|+|||++++.|++.+
T Consensus 8 rI~iEG~iGsGKSTl~~~L~~~l 30 (333)
T d1p6xa_ 8 RIYLDGVYGIGKSTTGRVMASAA 30 (333)
T ss_dssp EEEEECSTTSSHHHHHHHHHSGG
T ss_pred EEEEECCCCCCHHHHHHHHHHHH
T ss_conf 99998886678999999999986
No 472
>d1wmsa_ c.37.1.8 (A:) Rab9a {Human (Homo sapiens) [TaxId: 9606]}
Probab=82.88 E-value=0.47 Score=20.78 Aligned_cols=21 Identities=29% Similarity=0.578 Sum_probs=18.6
Q ss_pred EEEECCCCCHHHHHHHHHHHH
Q ss_conf 078889997199999999999
Q 005511 66 PCLIGEPGVGKTAIAEGLAQR 86 (693)
Q Consensus 66 ilL~GppGtGKT~la~~la~~ 86 (693)
+++.|++|+|||++++.+.+.
T Consensus 9 I~vvG~~~vGKSSli~~~~~~ 29 (174)
T d1wmsa_ 9 VILLGDGGVGKSSLMNRYVTN 29 (174)
T ss_dssp EEEECCTTSSHHHHHHHHHHS
T ss_pred EEEECCCCCCHHHHHHHHHHC
T ss_conf 999999997999999999849
No 473
>g1ii8.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=82.84 E-value=0.67 Score=19.71 Aligned_cols=24 Identities=21% Similarity=0.439 Sum_probs=20.2
Q ss_pred CEEEECCCCCHHHHHHHHHHHHHH
Q ss_conf 807888999719999999999975
Q 005511 65 NPCLIGEPGVGKTAIAEGLAQRIA 88 (693)
Q Consensus 65 ~ilL~GppGtGKT~la~~la~~l~ 88 (693)
..+|+||.|+|||++..|++-.+.
T Consensus 25 ~~vi~G~NgsGKTtileAI~~~l~ 48 (369)
T g1ii8.1 25 INLIIGQNGSGKSSLLDAILVGLY 48 (369)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHHC
T ss_conf 199997899999999999999976
No 474
>d2ngra_ c.37.1.8 (A:) CDC42 {Human (Homo sapiens) [TaxId: 9606]}
Probab=82.52 E-value=0.49 Score=20.66 Aligned_cols=22 Identities=23% Similarity=0.369 Sum_probs=18.8
Q ss_pred EEEECCCCCHHHHHHHHHHHHH
Q ss_conf 0788899971999999999997
Q 005511 66 PCLIGEPGVGKTAIAEGLAQRI 87 (693)
Q Consensus 66 ilL~GppGtGKT~la~~la~~l 87 (693)
+++.|++|+|||++++.+...-
T Consensus 6 vvllG~~~vGKTSli~r~~~~~ 27 (191)
T d2ngra_ 6 CVVVGDGAVGKTCLLISYTTNK 27 (191)
T ss_dssp EEEEESTTSSHHHHHHHHHHSC
T ss_pred EEEECCCCCCHHHHHHHHHHCC
T ss_conf 9999999969999999997199
No 475
>d1ek0a_ c.37.1.8 (A:) Ypt51 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=82.25 E-value=0.51 Score=20.52 Aligned_cols=22 Identities=32% Similarity=0.462 Sum_probs=18.6
Q ss_pred EEEECCCCCHHHHHHHHHHHHH
Q ss_conf 0788899971999999999997
Q 005511 66 PCLIGEPGVGKTAIAEGLAQRI 87 (693)
Q Consensus 66 ilL~GppGtGKT~la~~la~~l 87 (693)
+++.|++|+|||+|++.+...-
T Consensus 6 i~vvG~~~vGKTsLi~~~~~~~ 27 (170)
T d1ek0a_ 6 LVLLGEAAVGKSSIVLRFVSND 27 (170)
T ss_dssp EEEECSTTSSHHHHHHHHHHSC
T ss_pred EEEECCCCCCHHHHHHHHHHCC
T ss_conf 9999999919899999997299
No 476
>d1x3sa1 c.37.1.8 (A:2-178) Rab18 {Human (Homo sapiens) [TaxId: 9606]}
Probab=82.00 E-value=0.53 Score=20.41 Aligned_cols=22 Identities=32% Similarity=0.569 Sum_probs=18.9
Q ss_pred CEEEECCCCCHHHHHHHHHHHH
Q ss_conf 8078889997199999999999
Q 005511 65 NPCLIGEPGVGKTAIAEGLAQR 86 (693)
Q Consensus 65 ~ilL~GppGtGKT~la~~la~~ 86 (693)
-+++.|.+|+|||++++.+...
T Consensus 9 Ki~vvG~~~vGKTsli~~l~~~ 30 (177)
T d1x3sa1 9 KILIIGESGVGKSSLLLRFTDD 30 (177)
T ss_dssp EEEEECSTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHHC
T ss_conf 8999998990889999999719
No 477
>d2b8ta1 c.37.1.24 (A:11-149) Thymidine kinase, TK1, N-terminal domain {Ureaplasma urealyticum [TaxId: 2130]}
Probab=81.94 E-value=0.92 Score=18.73 Aligned_cols=94 Identities=14% Similarity=0.175 Sum_probs=45.3
Q ss_pred EEEECCCCCCHHH-HHHHHHHHHCCCCCCEEEECCCCCCCH-HHHHHHCCCCCCCCCCCCCCHHHHHHHCC----CCEEE
Q ss_conf 9995158892799-999999996399754055335432210-00110028999876767512266999809----99899
Q 005511 409 FIFSGPTGVGKSE-LAKALAAYYFGSEEAMIRLDMSEFMER-HTVSKLIGSPPGYVGYTEGGQLTEAVRRR----PYTVV 482 (693)
Q Consensus 409 ill~Gp~GtGKt~-lA~~la~~l~~~~~~~~~~~~~~~~~~-~~~~~l~g~~~~~~g~~~~~~l~~~~~~~----~~~vl 482 (693)
-+++||=.+|||+ +.+.+.++... +.+.+.++...-... .....-.|....-........+....... ...++
T Consensus 5 ~~i~GpMfsGKTteLi~~~~~~~~~-~~kv~~ikp~~D~R~~~~i~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~dvI 83 (139)
T d2b8ta1 5 EFITGPMFAGKTAELIRRLHRLEYA-DVKYLVFKPKIDTRSIRNIQSRTGTSLPSVEVESAPEILNYIMSNSFNDETKVI 83 (139)
T ss_dssp EEEECSTTSCHHHHHHHHHHHHHHT-TCCEEEEEECCCGGGCSSCCCCCCCSSCCEEESSTHHHHHHHHSTTSCTTCCEE
T ss_pred EEEECCCCCHHHHHHHHHHHHHHHC-CCCEEEEEECCCCCCCCEEECCCCCEEEEEEECCCHHHHHHHHHHCCCCCCCEE
T ss_conf 9999150678999999999999877-995899977313424644772368526558952640357888753016676799
Q ss_pred EECCCCCCCHHHHHHHHHHHHC
Q ss_conf 9846742298899999997405
Q 005511 483 LFDEIEKAHPDVFNMMLQILED 504 (693)
Q Consensus 483 ~iDEid~l~~~~~~~Ll~~le~ 504 (693)
++||++-++.. ...+...+.+
T Consensus 84 ~IDE~QFf~d~-i~~~~~~~~~ 104 (139)
T d2b8ta1 84 GIDEVQFFDDR-ICEVANILAE 104 (139)
T ss_dssp EECSGGGSCTH-HHHHHHHHHH
T ss_pred EECHHHHCCHH-HHHHHHHHHH
T ss_conf 96103435615-8899999984
No 478
>d1mh1a_ c.37.1.8 (A:) Rac {Human (Homo sapiens) [TaxId: 9606]}
Probab=81.91 E-value=0.53 Score=20.38 Aligned_cols=23 Identities=22% Similarity=0.261 Sum_probs=19.1
Q ss_pred EEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 89995158892799999999996
Q 005511 408 SFIFSGPTGVGKSELAKALAAYY 430 (693)
Q Consensus 408 ~ill~Gp~GtGKt~lA~~la~~l 430 (693)
=+++.|.+|+|||++...+...-
T Consensus 7 KivviG~~~vGKTsli~~~~~~~ 29 (183)
T d1mh1a_ 7 KCVVVGDGAVGKTCLLISYTTNA 29 (183)
T ss_dssp EEEEECSTTSSHHHHHHHHHHSS
T ss_pred EEEEECCCCCCHHHHHHHHHHCC
T ss_conf 99999999979999999997498
No 479
>d1egaa1 c.37.1.8 (A:4-182) GTPase Era, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=81.75 E-value=0.57 Score=20.18 Aligned_cols=23 Identities=26% Similarity=0.524 Sum_probs=19.9
Q ss_pred CCEEEECCCCCHHHHHHHHHHHH
Q ss_conf 98078889997199999999999
Q 005511 64 NNPCLIGEPGVGKTAIAEGLAQR 86 (693)
Q Consensus 64 ~~ilL~GppGtGKT~la~~la~~ 86 (693)
..|.|.|.||+|||+|++++.+.
T Consensus 6 ~~I~iiG~~nvGKSSLin~L~~~ 28 (179)
T d1egaa1 6 GFIAIVGRPNVGKSTLLNKLLGQ 28 (179)
T ss_dssp EEEEEECSSSSSHHHHHHHHHTC
T ss_pred CEEEEECCCCCCHHHHHHHHHCC
T ss_conf 19999979999899999999589
No 480
>d1t5la1 c.37.1.19 (A:2-414) Nucleotide excision repair enzyme UvrB {Bacillus caldotenax [TaxId: 1395]}
Probab=81.72 E-value=0.94 Score=18.68 Aligned_cols=54 Identities=22% Similarity=0.396 Sum_probs=41.1
Q ss_pred CCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEE
Q ss_conf 98766888999999999703999980788899971999999999997559999988996699986
Q 005511 41 LDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLD 105 (693)
Q Consensus 41 ~~~ivG~~~~~~~l~~~l~~~~~~~ilL~GppGtGKT~la~~la~~l~~~~~~~~~~~~~~~~~~ 105 (693)
+.+---|..+++.+.+-+.. ..++.+|.|-+|+|||.++.++++.. +.+++.+.
T Consensus 10 ~~p~gDQP~aI~~l~~~l~~-g~~~q~l~GltGS~ka~~iA~l~~~~----------~rp~LVVt 63 (413)
T d1t5la1 10 YEPQGDQPQAIAKLVDGLRR-GVKHQTLLGATGTGKTFTISNVIAQV----------NKPTLVIA 63 (413)
T ss_dssp SCCCTTHHHHHHHHHHHHHH-TCSEEEEEECTTSCHHHHHHHHHHHH----------TCCEEEEC
T ss_pred CCCCCCCHHHHHHHHHHHHC-CCCCEEEECCCCCHHHHHHHHHHHHH----------CCCEEEEE
T ss_conf 89999888999999999865-99858996778748999999999973----------99989994
No 481
>d1w1wa_ c.37.1.12 (A:) Smc head domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=81.54 E-value=0.54 Score=20.32 Aligned_cols=42 Identities=14% Similarity=0.201 Sum_probs=29.5
Q ss_pred CCCCEEEEECCCCC-CCHHHHHHHHHHHHCCEEECCCCCEEECCCEEEEEECC
Q ss_conf 09998999846742-29889999999740564637999833169769999538
Q 005511 476 RRPYTVVLFDEIEK-AHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSN 527 (693)
Q Consensus 476 ~~~~~vl~iDEid~-l~~~~~~~Ll~~le~g~~~~~~~~~~~~~~~i~I~tsn 527 (693)
..+..+++|||++. +++.....+...|..-. ..+..+|++|.
T Consensus 352 ~~~~pililDE~d~~Ld~~~~~~~~~~l~~~~----------~~~~Q~I~iTH 394 (427)
T d1w1wa_ 352 YQPSPFFVLDEVDAALDITNVQRIAAYIRRHR----------NPDLQFIVISL 394 (427)
T ss_dssp SSCCSEEEESSTTTTCCHHHHHHHHHHHHHHC----------BTTBEEEEECS
T ss_pred CCCCCEEEEECCCCCCCHHHHHHHHHHHHHHH----------CCCCEEEEEEC
T ss_conf 79997799968877789999999999999972----------89988999958
No 482
>d1e2ka_ c.37.1.1 (A:) Thymidine kinase {Herpes simplex virus type 1, different strains [TaxId: 10298]}
Probab=81.47 E-value=0.41 Score=21.14 Aligned_cols=23 Identities=26% Similarity=0.268 Sum_probs=20.1
Q ss_pred EEEECCCCCHHHHHHHHHHHHHH
Q ss_conf 07888999719999999999975
Q 005511 66 PCLIGEPGVGKTAIAEGLAQRIA 88 (693)
Q Consensus 66 ilL~GppGtGKT~la~~la~~l~ 88 (693)
|.+-|+-|+||||+++.+++.+.
T Consensus 7 I~IEG~iGsGKTTl~~~La~~l~ 29 (329)
T d1e2ka_ 7 VYIDGPHGMGKTTTTQLLVALGS 29 (329)
T ss_dssp EEECSCTTSSHHHHHHHHTC---
T ss_pred EEEECCCCCCHHHHHHHHHHHHC
T ss_conf 99989867789999999999817
No 483
>d1svsa1 c.37.1.8 (A:32-60,A:182-347) Transducin (alpha subunit) {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=81.17 E-value=0.5 Score=20.59 Aligned_cols=20 Identities=25% Similarity=0.383 Sum_probs=11.5
Q ss_pred EEEECCCCCHHHHHHHHHHH
Q ss_conf 07888999719999999999
Q 005511 66 PCLIGEPGVGKTAIAEGLAQ 85 (693)
Q Consensus 66 ilL~GppGtGKT~la~~la~ 85 (693)
++|.|..|+|||++++.+..
T Consensus 5 ivllG~~~vGKTsl~~r~~~ 24 (195)
T d1svsa1 5 LLLLGAGESGKSTIVKQMKI 24 (195)
T ss_dssp EEEECSTTSSHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHH
T ss_conf 99999999888999998840
No 484
>g1qhh.1 c.37.1.19 (A:,B:,C:,D:) DEXX box DNA helicase {Bacillus stearothermophilus, PcrA [TaxId: 1422]}
Probab=80.26 E-value=0.77 Score=19.28 Aligned_cols=13 Identities=23% Similarity=0.212 Sum_probs=5.4
Q ss_pred HHHHHHHHHHHCC
Q ss_conf 8999999974056
Q 005511 493 DVFNMMLQILEDG 505 (693)
Q Consensus 493 ~~~~~Ll~~le~g 505 (693)
.........+..+
T Consensus 332 ~~~~~~~~~~~~~ 344 (623)
T g1qhh.1 332 FVAGRIREAVERG 344 (623)
T ss_dssp HHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHCC
T ss_conf 6544578999738
No 485
>d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]}
Probab=80.20 E-value=0.84 Score=19.02 Aligned_cols=16 Identities=25% Similarity=0.092 Sum_probs=9.2
Q ss_pred CCCCCHHHHHHHHHHH
Q ss_conf 5889279999999999
Q 005511 414 PTGVGKSELAKALAAY 429 (693)
Q Consensus 414 p~GtGKt~lA~~la~~ 429 (693)
|.|+-+|.+-+.....
T Consensus 492 ~~~td~~~l~kl~~~~ 507 (789)
T d1kk8a2 492 PKADDKSFQDKLYQNH 507 (789)
T ss_dssp TTCCHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHH
T ss_conf 8887789999999874
No 486
>d1e2ka_ c.37.1.1 (A:) Thymidine kinase {Herpes simplex virus type 1, different strains [TaxId: 10298]}
Probab=80.19 E-value=0.4 Score=21.22 Aligned_cols=22 Identities=32% Similarity=0.551 Sum_probs=15.2
Q ss_pred EEEECCCCCCHHHHHHHHHHHH
Q ss_conf 9995158892799999999996
Q 005511 409 FIFSGPTGVGKSELAKALAAYY 430 (693)
Q Consensus 409 ill~Gp~GtGKt~lA~~la~~l 430 (693)
|.+-|+-|+|||++++.|++.+
T Consensus 7 I~IEG~iGsGKTTl~~~La~~l 28 (329)
T d1e2ka_ 7 VYIDGPHGMGKTTTTQLLVALG 28 (329)
T ss_dssp EEECSCTTSSHHHHHHHHTC--
T ss_pred EEEECCCCCCHHHHHHHHHHHH
T ss_conf 9998986778999999999981
No 487
>d1g3qa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=80.13 E-value=1.1 Score=18.32 Aligned_cols=31 Identities=32% Similarity=0.604 Sum_probs=18.3
Q ss_pred ECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEC
Q ss_conf 88999719999999999975599999889966999865
Q 005511 69 IGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDM 106 (693)
Q Consensus 69 ~GppGtGKT~la~~la~~l~~~~~~~~~~~~~~~~~~~ 106 (693)
.+..|+||||++..+|..+... +.++..+++
T Consensus 9 ~~kGGvGKTtia~nLA~~la~~-------g~~VlliD~ 39 (237)
T d1g3qa_ 9 SGKGGTGKTTVTANLSVALGDR-------GRKVLAVDG 39 (237)
T ss_dssp CSSTTSSHHHHHHHHHHHHHHT-------TCCEEEEEC
T ss_pred CCCCCCCHHHHHHHHHHHHHHC-------CCCEEEEEC
T ss_conf 9999881999999999999968-------998999949
No 488
>d2c78a3 c.37.1.8 (A:9-212) Elongation factor Tu (EF-Tu), N-terminal (G) domain {Thermus thermophilus [TaxId: 274]}
Probab=79.98 E-value=1.1 Score=18.29 Aligned_cols=25 Identities=28% Similarity=0.278 Sum_probs=13.6
Q ss_pred CCEEEEEECCCCCCHHHHHHHHHHH
Q ss_conf 8438999515889279999999999
Q 005511 405 PIASFIFSGPTGVGKSELAKALAAY 429 (693)
Q Consensus 405 ~~~~ill~Gp~GtGKt~lA~~la~~ 429 (693)
|..++.+.|.+++|||++..+|...
T Consensus 2 ~~ini~iiGhvd~GKSTL~~~Ll~~ 26 (204)
T d2c78a3 2 PHVNVGTIGHVDHGKTTLTAALTYV 26 (204)
T ss_dssp CEEEEEEECSTTSSHHHHHHHHHHH
T ss_pred CCEEEEEEECCCCCHHHHHHHHHHH
T ss_conf 9719999947898499999999998
No 489
>d1qdea_ c.37.1.19 (A:) Initiation factor 4a {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=79.84 E-value=1.1 Score=18.26 Aligned_cols=15 Identities=20% Similarity=0.421 Sum_probs=8.4
Q ss_pred EEEEECCCCCCHHHH
Q ss_conf 899951588927999
Q 005511 408 SFIFSGPTGVGKSEL 422 (693)
Q Consensus 408 ~ill~Gp~GtGKt~l 422 (693)
.++...|+|+|||..
T Consensus 49 dvl~~a~TGsGKT~a 63 (212)
T d1qdea_ 49 DVLAQAQSGTGKTGT 63 (212)
T ss_dssp CEEEECCTTSSHHHH
T ss_pred CEEEECCCCCCHHHH
T ss_conf 877445653010046
No 490
>d1hv8a1 c.37.1.19 (A:3-210) Putative DEAD box RNA helicase {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=79.82 E-value=1.1 Score=18.26 Aligned_cols=21 Identities=19% Similarity=0.192 Sum_probs=12.8
Q ss_pred EEEEECCCCCCHHHHHHHHHH
Q ss_conf 899951588927999999999
Q 005511 408 SFIFSGPTGVGKSELAKALAA 428 (693)
Q Consensus 408 ~ill~Gp~GtGKt~lA~~la~ 428 (693)
+++...|+|+|||..+-...-
T Consensus 44 d~iv~a~TGsGKT~~~~l~~~ 64 (208)
T d1hv8a1 44 NIVAQARTGSGKTASFAIPLI 64 (208)
T ss_dssp EEEEECCSSSSHHHHHHHHHH
T ss_pred CEEEECHHCCCCCCEEECCCC
T ss_conf 746441003444400203332
No 491
>d1zcba2 c.37.1.8 (A:47-75,A:202-372) Transducin (alpha subunit) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=79.67 E-value=0.6 Score=20.00 Aligned_cols=19 Identities=26% Similarity=0.450 Sum_probs=17.7
Q ss_pred EEEECCCCCCHHHHHHHHH
Q ss_conf 9995158892799999999
Q 005511 409 FIFSGPTGVGKSELAKALA 427 (693)
Q Consensus 409 ill~Gp~GtGKt~lA~~la 427 (693)
+++.|.+|+|||++...+.
T Consensus 5 ivllG~~~vGKTsll~r~~ 23 (200)
T d1zcba2 5 ILLLGAGESGKSTFLKQMR 23 (200)
T ss_dssp EEEECSTTSSHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHH
T ss_conf 9999899999899999884
No 492
>d1qhla_ c.37.1.12 (A:) Cell division protein MukB {Escherichia coli [TaxId: 562]}
Probab=79.66 E-value=0.23 Score=22.86 Aligned_cols=24 Identities=29% Similarity=0.354 Sum_probs=13.8
Q ss_pred EEEECCCCCCHHHHHHHHHHHHCC
Q ss_conf 999515889279999999999639
Q 005511 409 FIFSGPTGVGKSELAKALAAYYFG 432 (693)
Q Consensus 409 ill~Gp~GtGKt~lA~~la~~l~~ 432 (693)
.+|+||.|+|||++..+|.-.+++
T Consensus 27 tvi~G~NGsGKStil~Ai~~~L~g 50 (222)
T d1qhla_ 27 TTLSGGNGAGKSTTMAAFVTALIP 50 (222)
T ss_dssp HHHHSCCSHHHHHHHHHHHHHHSC
T ss_pred EEEECCCCCCHHHHHHHHHHHHCC
T ss_conf 899889999879999999999668
No 493
>d2gj8a1 c.37.1.8 (A:216-376) Probable tRNA modification GTPase TrmE (MnmE), G domain {Escherichia coli [TaxId: 562]}
Probab=79.57 E-value=0.6 Score=20.00 Aligned_cols=22 Identities=36% Similarity=0.531 Sum_probs=18.7
Q ss_pred EEEEECCCCCCHHHHHHHHHHH
Q ss_conf 8999515889279999999999
Q 005511 408 SFIFSGPTGVGKSELAKALAAY 429 (693)
Q Consensus 408 ~ill~Gp~GtGKt~lA~~la~~ 429 (693)
.+++.|+||+|||++...|...
T Consensus 3 kI~lvG~~nvGKSsLin~l~~~ 24 (161)
T d2gj8a1 3 KVVIAGRPNAGKSSLLNALAGR 24 (161)
T ss_dssp EEEEEESTTSSHHHHHHHHHTS
T ss_pred EEEEECCCCCCHHHHHHHHHCC
T ss_conf 9999899999899999999688
No 494
>d1azta2 c.37.1.8 (A:35-65,A:202-391) Transducin (alpha subunit) {Cow (Bos taurus) [TaxId: 9913]}
Probab=79.45 E-value=0.62 Score=19.93 Aligned_cols=23 Identities=22% Similarity=0.371 Sum_probs=19.3
Q ss_pred EEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 89995158892799999999996
Q 005511 408 SFIFSGPTGVGKSELAKALAAYY 430 (693)
Q Consensus 408 ~ill~Gp~GtGKt~lA~~la~~l 430 (693)
-+++.|++|+|||++.+.+...-
T Consensus 8 KilllG~~~vGKTsll~~~~~~~ 30 (221)
T d1azta2 8 RLLLLGAGESGKSTIVKQMRILH 30 (221)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHCCC
T ss_conf 79999899998899999895098
No 495
>d1puia_ c.37.1.8 (A:) Probable GTPase EngB {Escherichia coli [TaxId: 562]}
Probab=79.43 E-value=0.47 Score=20.78 Aligned_cols=24 Identities=21% Similarity=0.318 Sum_probs=20.1
Q ss_pred CCCCEEEECCCCCHHHHHHHHHHH
Q ss_conf 999807888999719999999999
Q 005511 62 TKNNPCLIGEPGVGKTAIAEGLAQ 85 (693)
Q Consensus 62 ~~~~ilL~GppGtGKT~la~~la~ 85 (693)
....|.|.|+|++|||+|.+++..
T Consensus 15 ~~~~I~lvG~~NvGKSSL~n~L~~ 38 (188)
T d1puia_ 15 TGIEVAFAGRSNAGKSSALNTLTN 38 (188)
T ss_dssp CSEEEEEEECTTSSHHHHHTTTCC
T ss_pred CCCEEEEECCCCCCHHHHHHHHHC
T ss_conf 697899988999989999999858
No 496
>d1j3ba1 c.91.1.1 (A:212-529) Phosphoenolpyruvate (PEP) carboxykinase (ATP-oxaloacetate carboxy-lyase) {Thermus thermophilus [TaxId: 274]}
Probab=79.38 E-value=0.37 Score=21.50 Aligned_cols=18 Identities=28% Similarity=0.571 Sum_probs=13.0
Q ss_pred CCEEEECCCCCHHHHHHH
Q ss_conf 980788899971999999
Q 005511 64 NNPCLIGEPGVGKTAIAE 81 (693)
Q Consensus 64 ~~ilL~GppGtGKT~la~ 81 (693)
.-.||+|.+|||||||..
T Consensus 15 ~valffGLSGTGKTTLs~ 32 (318)
T d1j3ba1 15 DVAVFFGLSGTGKTTLST 32 (318)
T ss_dssp CEEEEEECTTSCHHHHTC
T ss_pred CEEEEECCCCCCCCCCCC
T ss_conf 889997368798142210
No 497
>d1nija1 c.37.1.10 (A:2-223) Hypothetical protein YjiA, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=79.12 E-value=0.43 Score=21.00 Aligned_cols=23 Identities=26% Similarity=0.332 Sum_probs=19.4
Q ss_pred CCEEEECCCCCHHHHHHHHHHHH
Q ss_conf 98078889997199999999999
Q 005511 64 NNPCLIGEPGVGKTAIAEGLAQR 86 (693)
Q Consensus 64 ~~ilL~GppGtGKT~la~~la~~ 86 (693)
+-.++.|..|+||||+.+.+.+.
T Consensus 4 Pv~iitGFLGaGKTTll~~lL~~ 26 (222)
T d1nija1 4 AVTLLTGFLGAGKTTLLRHILNE 26 (222)
T ss_dssp EEEEEEESSSSSCHHHHHHHHHS
T ss_pred CEEEEEECCCCCHHHHHHHHHHC
T ss_conf 88998648889999999999856
No 498
>d1c9ka_ c.37.1.11 (A:) Adenosylcobinamide kinase/adenosylcobinamide phosphate guanylyltransferase CobU {Salmonella typhimurium [TaxId: 90371]}
Probab=79.03 E-value=0.4 Score=21.22 Aligned_cols=19 Identities=37% Similarity=0.504 Sum_probs=11.8
Q ss_pred EEEECCCCCCHHHHHHHHH
Q ss_conf 9995158892799999999
Q 005511 409 FIFSGPTGVGKSELAKALA 427 (693)
Q Consensus 409 ill~Gp~GtGKt~lA~~la 427 (693)
+|+.|+..+||+..|..++
T Consensus 2 iLVtGGarSGKS~~AE~l~ 20 (180)
T d1c9ka_ 2 ILVTGGARSGKSRHAEALI 20 (180)
T ss_dssp EEEEECTTSSHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHH
T ss_conf 8997898765999999998
No 499
>d2olra1 c.91.1.1 (A:228-540) Phosphoenolpyruvate (PEP) carboxykinase (ATP-oxaloacetate carboxy-lyase) {Escherichia coli [TaxId: 562]}
Probab=78.61 E-value=0.5 Score=20.55 Aligned_cols=17 Identities=29% Similarity=0.606 Sum_probs=11.8
Q ss_pred CCEEEECCCCCHHHHHH
Q ss_conf 98078889997199999
Q 005511 64 NNPCLIGEPGVGKTAIA 80 (693)
Q Consensus 64 ~~ilL~GppGtGKT~la 80 (693)
.-.+|.|.+|||||||.
T Consensus 15 ~~alfFGLSGTGKTTLs 31 (313)
T d2olra1 15 DVAVFFGLSGTGKTTLS 31 (313)
T ss_dssp CEEEEECSTTSSHHHHH
T ss_pred CEEEEECCCCCCCCCCE
T ss_conf 88999704779856023
No 500
>d1osna_ c.37.1.1 (A:) Thymidine kinase {Varicella-zoster virus [TaxId: 10335]}
Probab=78.55 E-value=0.34 Score=21.76 Aligned_cols=29 Identities=17% Similarity=0.358 Sum_probs=20.1
Q ss_pred EEEECCCCCCHHHHHHHHHHHHCCCCCCE
Q ss_conf 99951588927999999999963997540
Q 005511 409 FIFSGPTGVGKSELAKALAAYYFGSEEAM 437 (693)
Q Consensus 409 ill~Gp~GtGKt~lA~~la~~l~~~~~~~ 437 (693)
|.+-|+-|+|||++++.|++.+...+.+.
T Consensus 8 I~IEG~iGsGKSTl~~~L~~~l~~~g~~v 36 (331)
T d1osna_ 8 IYLDGAYGIGKTTAAEEFLHHFAITPNRI 36 (331)
T ss_dssp EEEEESSSSCTTHHHHHHHHTTTTSGGGE
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHCCCCE
T ss_conf 99988877889999999999873468856
Done!