BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 005512
(693 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q3E6Q1|PPR32_ARATH Pentatricopeptide repeat-containing protein At1g11290
OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1
Length = 809
Score = 539 bits (1389), Expect = e-152, Method: Compositional matrix adjust.
Identities = 266/658 (40%), Positives = 410/658 (62%), Gaps = 27/658 (4%)
Query: 60 KTLHAFTLRSRFYHHHDLFLVTNLVSQYASLGSISHAFSLFSSVSDSCDLFLWNVMIRAF 119
K +H ++S F DLF +T L + YA ++ A +F + + DL WN ++ +
Sbjct: 155 KEIHGLLVKSGF--SLDLFAMTGLENMYAKCRQVNEARKVFDRMPER-DLVSWNTIVAGY 211
Query: 120 VDNRQFDRSLQLYAQMRELDINPDKFTFPFVLKACGYLRDIEFGVKVHKDAVDSGYWSDV 179
N +L++ M E ++ P T VL A LR I G ++H A+ SG+ S V
Sbjct: 212 SQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLV 271
Query: 180 FVGNSLIAMYGKCGRVDVCRQLFDEMPERNVVTWSSLTGAYAQNGCYEEGLLLFKRMMDE 239
+ +L+ MY KCG ++ RQLFD M ERNVV+W+S+ AY QN +E +L+F++M+DE
Sbjct: 272 NISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDE 331
Query: 240 GIRPNRVVILNAMACVRKVSEADD---VCRVVVDNGLDLDQSLQNAAMVMYARCGRMDMA 296
G++P V ++ A+ + + + + ++ V+ GLD + S+ N+ + MY +C +D A
Sbjct: 332 GVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTA 391
Query: 297 RRFFEGILNKDLVSWTSMIEAYAQADLPLEALEVYRQMILRRVLPDSVTFLGVIRACSSL 356
F + ++ LVSW +MI +AQ P++AL + QM R V PD+ T++ VI A + L
Sbjct: 392 ASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAEL 451
Query: 357 ASFQQARTVHGIIIHCFLGNQLALDTAVVDLYVKCGSLMHARKVFDRMKQKNVISWSTMI 416
+ A+ +HG+++ L + + TA+VD+Y KCG++M AR +FD M +++V +W+ MI
Sbjct: 452 SITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMI 511
Query: 417 SGYGMHGHGREALFLFDQM-KALIKPDHITFVSVLSACSHAGLIDEGWECFNSMLRDFGV 475
GYG HG G+ AL LF++M K IKP+ +TF+SV+SACSH+GL++ G +CF M ++ +
Sbjct: 512 DGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSI 571
Query: 476 APRPEHYACMVDMLGRAGKLNEAREFIERMPIRPDAGVWGSLLGACRIHSNVELAEMAAK 535
+HY MVD+LGRAG+LNEA +FI +MP++P V+G++LGAC+IH NV AE AA+
Sbjct: 572 ELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAE 631
Query: 536 ALFDLDAENPGRYVILSNIYASSGKRIEANRIRALMKRRGVKKITGHTVIEIKNKVHTFV 595
LF+L+ ++ G +V+L+NIY ++ + ++R M R+G++K G +++EIKN+VH+F
Sbjct: 632 RLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFF 691
Query: 596 AGDRSQPQTELTYSELAKLMDRIRREGYTPDLN--------------------FPFVFGL 635
+G + P ++ Y+ L KL+ I+ GY PD N FGL
Sbjct: 692 SGSTAHPDSKKIYAFLEKLICHIKEAGYVPDTNLVLGVENDVKEQLLSTHSEKLAISFGL 751
Query: 636 LNSGPGSAIRIKKNLRVCGDCHTATKFISKVTGREIIVRDAHRFHHFKDGTCSCGDYW 693
LN+ G+ I ++KNLRVC DCH ATK+IS VTGREI+VRD RFHHFK+G CSCGDYW
Sbjct: 752 LNTTAGTTIHVRKNLRVCADCHNATKYISLVTGREIVVRDMQRFHHFKNGACSCGDYW 809
Score = 261 bits (667), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 138/482 (28%), Positives = 261/482 (54%), Gaps = 15/482 (3%)
Query: 50 IKQCQTLQSLKTLHAFTLRSRFYHHHDLFLVTNLVSQYASLGSISHAFSLFSSVSDSCDL 109
+++C +L+ L+ + ++ Y H F T LVS + GS+ A +F + ++
Sbjct: 44 LERCSSLKELRQILPLVFKNGLYQEH--FFQTKLVSLFCRYGSVDEAARVFEPIDSKLNV 101
Query: 110 FLWNVMIRAFVDNRQFDRSLQLYAQMRELDINPDKFTFPFVLKACGYLRDIEFGVKVHKD 169
L++ M++ F D++LQ + +MR D+ P + F ++LK CG ++ G ++H
Sbjct: 102 -LYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGL 160
Query: 170 AVDSGYWSDVFVGNSLIAMYGKCGRVDVCRQLFDEMPERNVVTWSSLTGAYAQNGCYEEG 229
V SG+ D+F L MY KC +V+ R++FD MPER++V+W+++ Y+QNG
Sbjct: 161 LVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMA 220
Query: 230 LLLFKRMMDEGIRPNRVVI---LNAMACVRKVSEADDVCRVVVDNGLDLDQSLQNAAMVM 286
L + K M +E ++P+ + I L A++ +R +S ++ + +G D ++ A + M
Sbjct: 221 LEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDM 280
Query: 287 YARCGRMDMARRFFEGILNKDLVSWTSMIEAYAQADLPLEALEVYRQMILRRVLPDSVTF 346
YA+CG ++ AR+ F+G+L +++VSW SMI+AY Q + P EA+ ++++M+ V P V+
Sbjct: 281 YAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSV 340
Query: 347 LGVIRACSSLASFQQARTVHGIIIHCFLGNQLALDTAVVDLYVKCGSLMHARKVFDRMKQ 406
+G + AC+ L ++ R +H + + L +++ +++ +Y KC + A +F +++
Sbjct: 341 MGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQS 400
Query: 407 KNVISWSTMISGYGMHGHGREALFLFDQMKA-LIKPDHITFVSVLSACSHAGLIDEGWEC 465
+ ++SW+ MI G+ +G +AL F QM++ +KPD T+VSV++A + +
Sbjct: 401 RTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWI 460
Query: 466 FNSMLR---DFGVAPRPEHYACMVDMLGRAGKLNEAREFIERMPIRPDAGVWGSLLGACR 522
++R D V +VDM + G + AR + M R W +++
Sbjct: 461 HGVVMRSCLDKNVFVT----TALVDMYAKCGAIMIARLIFDMMSER-HVTTWNAMIDGYG 515
Query: 523 IH 524
H
Sbjct: 516 TH 517
>sp|Q9LW32|PP258_ARATH Pentatricopeptide repeat-containing protein At3g26782,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H34 PE=2
SV=1
Length = 659
Score = 511 bits (1317), Expect = e-144, Method: Compositional matrix adjust.
Identities = 257/630 (40%), Positives = 385/630 (61%), Gaps = 34/630 (5%)
Query: 98 SLFSSVSDSCDLFLWNVMIRAFVDNRQFDRSLQLYAQMRELDINPDKFTFPFVLKACGYL 157
+LF+ D D+F WN +I + +L ++ MR+L + P + +FP +KAC L
Sbjct: 30 TLFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSL 89
Query: 158 RDIEFGVKVHKDAVDSGYWSDVFVGNSLIAMYGKCGRVDVCRQLFDEMPERNVVTWSSLT 217
DI G + H+ A GY SD+FV ++LI MY CG+++ R++FDE+P+RN+V+W+S+
Sbjct: 90 FDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMI 149
Query: 218 GAYAQNGCYEEGLLLFKRMMDEGIRPNRVVILNAMACVRKVSE---------ADDVCRVV 268
Y NG + + LFK ++ + + + L++M V +S + + V
Sbjct: 150 RGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFV 209
Query: 269 VDNGLDLDQSLQNAAMVMYARCGR--MDMARRFFEGILNKDLVSWTSMIEAYAQADLPLE 326
+ G D S+ N + YA+ G + +AR+ F+ I++KD VS+ S++ YAQ+ + E
Sbjct: 210 IKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNE 269
Query: 327 ALEVYRQMILRRVLP-DSVTFLGVIRACSSLASFQQARTVHGIIIHCFLGNQLALDTAVV 385
A EV+R+++ +V+ +++T V+ A S + + + +H +I L + + + T+++
Sbjct: 270 AFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSII 329
Query: 386 DLYVKCGSLMHARKVFDRMKQKNVISWSTMISGYGMHGHGREALFLFDQM-KALIKPDHI 444
D+Y KCG + ARK FDRMK KNV SW+ MI+GYGMHGH +AL LF M + ++P++I
Sbjct: 330 DMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYI 389
Query: 445 TFVSVLSACSHAGLIDEGWECFNSMLRDFGVAPRPEHYACMVDMLGRAGKLNEAREFIER 504
TFVSVL+ACSHAGL EGW FN+M FGV P EHY CMVD+LGRAG L +A + I+R
Sbjct: 390 TFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQR 449
Query: 505 MPIRPDAGVWGSLLGACRIHSNVELAEMAAKALFDLDAENPGRYVILSNIYASSGKRIEA 564
M ++PD+ +W SLL ACRIH NVELAE++ LF+LD+ N G Y++LS+IYA +G+ +
Sbjct: 450 MKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDV 509
Query: 565 NRIRALMKRRGVKKITGHTVIEIKNKVHTFVAGDRSQPQTELTYSELAKLMDRIRREGYT 624
R+R +MK RG+ K G +++E+ +VH F+ GD PQ E Y LA+L ++ GY
Sbjct: 510 ERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYV 569
Query: 625 PDLN---------------------FPFVFGLLNSGPGSAIRIKKNLRVCGDCHTATKFI 663
+ + FG++N+ PGS + + KNLRVC DCH K I
Sbjct: 570 SNTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHNVIKLI 629
Query: 664 SKVTGREIIVRDAHRFHHFKDGTCSCGDYW 693
SK+ RE +VRDA RFHHFKDG CSCGDYW
Sbjct: 630 SKIVDREFVVRDAKRFHHFKDGGCSCGDYW 659
Score = 85.9 bits (211), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 87/171 (50%), Gaps = 9/171 (5%)
Query: 292 RMDMARRFFEGILNKDLVSWTSMIEAYAQADLPLEALEVYRQMILRRVLPDSVTFLGVIR 351
R ++ F + D+ SW S+I A++ EAL + M + P +F I+
Sbjct: 25 RQNLTTLFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIK 84
Query: 352 ACSSLASFQQARTVHGIIIHCFLGNQLALDTAVVDLYVKCGSLMHARKVFDRMKQKNVIS 411
ACSSL + H + + + +A++ +Y CG L ARKVFD + ++N++S
Sbjct: 85 ACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVS 144
Query: 412 WSTMISGYGMHGHGREALFLF--------DQMKALIKPDHITFVSVLSACS 454
W++MI GY ++G+ +A+ LF D A+ D + VSV+SACS
Sbjct: 145 WTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMF-LDSMGLVSVISACS 194
>sp|Q7Y211|PP285_ARATH Pentatricopeptide repeat-containing protein At3g57430,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H81 PE=2
SV=2
Length = 890
Score = 501 bits (1290), Expect = e-141, Method: Compositional matrix adjust.
Identities = 270/688 (39%), Positives = 407/688 (59%), Gaps = 43/688 (6%)
Query: 45 TCISSIKQCQTLQSLKTLHAFTLRSRFYHHHDLFLVTNLVSQYASLGSISHAFSLFSSVS 104
T S++ + L K +HA+ LR + F++ LV+ Y LG ++ + L S
Sbjct: 207 TACSNLPMPEGLMMGKQVHAYGLRK---GELNSFIINTLVAMYGKLGKLASSKVLLGSFG 263
Query: 105 DSCDLFLWNVMIRAFVDNRQFDRSLQLYAQMRELDINPDKFTFPFVLKACGYLRDIEFGV 164
DL WN ++ + N Q +L+ +M + PD+FT VL AC +L + G
Sbjct: 264 GR-DLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGK 322
Query: 165 KVHKDAVDSGYW-SDVFVGNSLIAMYGKCGRVDVCRQLFDEMPERNVVTWSSLTGAYAQN 223
++H A+ +G + FVG++L+ MY C +V R++FD M +R + W+++ Y+QN
Sbjct: 323 ELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQN 382
Query: 224 GCYEEGLLLFKRMMDE-GIRPNRVVILNAM-ACVRK--VSEADDVCRVVVDNGLDLDQSL 279
+E LLLF M + G+ N + + ACVR S + + VV GLD D+ +
Sbjct: 383 EHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFV 442
Query: 280 QNAAMVMYARCGRMDMARRFFEGILNKDLVSWTSMIEAYAQADLPLEALEVYRQM--ILR 337
QN M MY+R G++D+A R F + ++DLV+W +MI Y ++ +AL + +M + R
Sbjct: 443 QNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLER 502
Query: 338 RV---------LPDSVTFLGVIRACSSLASFQQARTVHGIIIHCFLGNQLALDTAVVDLY 388
+V P+S+T + ++ +C++L++ + + +H I L +A+ +A+VD+Y
Sbjct: 503 KVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMY 562
Query: 389 VKCGSLMHARKVFDRMKQKNVISWSTMISGYGMHGHGREALFLFDQMKAL-IKPDHITFV 447
KCG L +RKVFD++ QKNVI+W+ +I YGMHG+G+EA+ L M +KP+ +TF+
Sbjct: 563 AKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFI 622
Query: 448 SVLSACSHAGLIDEGWECFNSMLRDFGVAPRPEHYACMVDMLGRAGKLNEAREFIERMPI 507
SV +ACSH+G++DEG F M D+GV P +HYAC+VD+LGRAG++ EA + + MP
Sbjct: 623 SVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPR 682
Query: 508 RPD-AGVWGSLLGACRIHSNVELAEMAAKALFDLDAENPGRYVILSNIYASSGKRIEANR 566
+ AG W SLLGA RIH+N+E+ E+AA+ L L+ YV+L+NIY+S+G +A
Sbjct: 683 DFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATE 742
Query: 567 IRALMKRRGVKKITGHTVIEIKNKVHTFVAGDRSQPQTELTYSELAKLMDRIRREGYTPD 626
+R MK +GV+K G + IE ++VH FVAGD S PQ+E L L +R+R+EGY PD
Sbjct: 743 VRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEGYVPD 802
Query: 627 LN---------------------FPFVFGLLNSGPGSAIRIKKNLRVCGDCHTATKFISK 665
+ FG+LN+ PG+ IR+ KNLRVC DCH ATKFISK
Sbjct: 803 TSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLATKFISK 862
Query: 666 VTGREIIVRDAHRFHHFKDGTCSCGDYW 693
+ REII+RD RFH FK+GTCSCGDYW
Sbjct: 863 IVDREIILRDVRRFHRFKNGTCSCGDYW 890
Score = 191 bits (486), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 133/456 (29%), Positives = 223/456 (48%), Gaps = 14/456 (3%)
Query: 73 HHHDLFLVTNLVSQYASLGS-ISHAFSLFSSVSDSCDLFLWNVMIRAFVDNRQFDRSLQL 131
H H L S + S +S A S+F S S S + W ++R+ V + ++
Sbjct: 27 HKHPYLLRATPTSATEDVASAVSGAPSIFISQSRSPEW--WIDLLRSKVRSNLLREAVLT 84
Query: 132 YAQMRELDINPDKFTFPFVLKACGYLRDIEFGVKVHKDAVDSGYWSD-VFVGNSLIAMYG 190
Y M L I PD + FP +LKA L+D+E G ++H GY D V V N+L+ +Y
Sbjct: 85 YVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYR 144
Query: 191 KCGRVDVCRQLFDEMPERNVVTWSSLTGAYAQNGCYEEGLLLFKRMMDEGIRPNRVVILN 250
KCG ++FD + ERN V+W+SL + +E L F+ M+DE + P+ +++
Sbjct: 145 KCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVS 204
Query: 251 AM-ACVR-KVSEADDVCRVVVDNGL---DLDQSLQNAAMVMYARCGRMDMARRFFEGILN 305
+ AC + E + + V GL +L+ + N + MY + G++ ++
Sbjct: 205 VVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFIINTLVAMYGKLGKLASSKVLLGSFGG 264
Query: 306 KDLVSWTSMIEAYAQADLPLEALEVYRQMILRRVLPDSVTFLGVIRACSSLASFQQARTV 365
+DLV+W +++ + Q + LEALE R+M+L V PD T V+ ACS L + + +
Sbjct: 265 RDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKEL 324
Query: 366 HGIII-HCFLGNQLALDTAVVDLYVKCGSLMHARKVFDRMKQKNVISWSTMISGYGMHGH 424
H + + L + +A+VD+Y C ++ R+VFD M + + W+ MI+GY + H
Sbjct: 325 HAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEH 384
Query: 425 GREALFLFDQMK--ALIKPDHITFVSVLSACSHAGLIDEGWECFNSMLRDFGVAPRPEHY 482
+EAL LF M+ A + + T V+ AC +G E + + G+
Sbjct: 385 DKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRK-EAIHGFVVKRGLDRDRFVQ 443
Query: 483 ACMVDMLGRAGKLNEAREFIERMPIRPDAGVWGSLL 518
++DM R GK++ A +M R D W +++
Sbjct: 444 NTLMDMYSRLGKIDIAMRIFGKMEDR-DLVTWNTMI 478
>sp|Q9LTV8|PP224_ARATH Pentatricopeptide repeat-containing protein At3g12770
OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1
Length = 694
Score = 496 bits (1278), Expect = e-139, Method: Compositional matrix adjust.
Identities = 244/643 (37%), Positives = 387/643 (60%), Gaps = 29/643 (4%)
Query: 78 FLVTNLVSQYASLGSISHAFSLFSSVSDSCDLFLWNVMIRAFVDNRQFDRSLQLYAQMRE 137
FL+T L+ +S G I+ A +F + +F WN +IR + N F +L +Y+ M+
Sbjct: 54 FLITKLIHASSSFGDITFARQVFDDLPRP-QIFPWNAIIRGYSRNNHFQDALLMYSNMQL 112
Query: 138 LDINPDKFTFPFVLKACGYLRDIEFGVKVHKDAVDSGYWSDVFVGNSLIAMYGKCGRVDV 197
++PD FTFP +LKAC L ++ G VH G+ +DVFV N LIA+Y KC R+
Sbjct: 113 ARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGS 172
Query: 198 CRQLFD--EMPERNVVTWSSLTGAYAQNGCYEEGLLLFKRMMDEGIRPNRVV---ILNAM 252
R +F+ +PER +V+W+++ AYAQNG E L +F +M ++P+ V +LNA
Sbjct: 173 ARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAF 232
Query: 253 ACVRKVSEADDVCRVVVDNGLDLDQSLQNAAMVMYARCGRMDMARRFFEGILNKDLVSWT 312
C++ + + + VV GL+++ L + MYA+CG++ A+ F+ + + +L+ W
Sbjct: 233 TCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWN 292
Query: 313 SMIEAYAQADLPLEALEVYRQMILRRVLPDSVTFLGVIRACSSLASFQQARTVHGIIIHC 372
+MI YA+ EA++++ +MI + V PD+++ I AC+ + S +QAR+++ +
Sbjct: 293 AMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRS 352
Query: 373 FLGNQLALDTAVVDLYVKCGSLMHARKVFDRMKQKNVISWSTMISGYGMHGHGREALFLF 432
+ + + +A++D++ KCGS+ AR VFDR ++V+ WS MI GYG+HG REA+ L+
Sbjct: 353 DYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLY 412
Query: 433 DQM-KALIKPDHITFVSVLSACSHAGLIDEGWECFNSMLRDFGVAPRPEHYACMVDMLGR 491
M + + P+ +TF+ +L AC+H+G++ EGW FN M D + P+ +HYAC++D+LGR
Sbjct: 413 RAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMA-DHKINPQQQHYACVIDLLGR 471
Query: 492 AGKLNEAREFIERMPIRPDAGVWGSLLGACRIHSNVELAEMAAKALFDLDAENPGRYVIL 551
AG L++A E I+ MP++P VWG+LL AC+ H +VEL E AA+ LF +D N G YV L
Sbjct: 472 AGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQL 531
Query: 552 SNIYASSGKRIEANRIRALMKRRGVKKITGHTVIEIKNKVHTFVAGDRSQPQTELTYSEL 611
SN+YA++ +R MK +G+ K G + +E++ ++ F GD+S P+ E ++
Sbjct: 532 SNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQV 591
Query: 612 AKLMDRIRREGYTP-------DLN--------------FPFVFGLLNSGPGSAIRIKKNL 650
+ R++ G+ DLN +GL+++ G+ +RI KNL
Sbjct: 592 EWIESRLKEGGFVANKDASLHDLNDEEAEETLCSHSERIAIAYGLISTPQGTPLRITKNL 651
Query: 651 RVCGDCHTATKFISKVTGREIIVRDAHRFHHFKDGTCSCGDYW 693
R C +CH ATK ISK+ REI+VRD +RFHHFKDG CSCGDYW
Sbjct: 652 RACVNCHAATKLISKLVDREIVVRDTNRFHHFKDGVCSCGDYW 694
Score = 56.6 bits (135), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 104/251 (41%), Gaps = 41/251 (16%)
Query: 361 QARTVHGIIIHCFLGNQLA--LDTAVVDLYVKCGSLMHARKVFDRMKQKNVISWSTMISG 418
Q + +H ++ LG Q + L T ++ G + AR+VFD + + + W+ +I G
Sbjct: 36 QLKQIHARLL--VLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRG 93
Query: 419 YGMHGHGREALFLFDQMK-ALIKPDHITFVSVLSACS-----------HAGL-------- 458
Y + H ++AL ++ M+ A + PD TF +L ACS HA +
Sbjct: 94 YSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDAD 153
Query: 459 --IDEGWECFNSMLRDFGVA-------PRPEH----YACMVDMLGRAGKLNEAREF---I 502
+ G + R G A P PE + +V + G+ EA E +
Sbjct: 154 VFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQM 213
Query: 503 ERMPIRPDAGVWGSLLGACRIHSNVELAEMAAKALFDLDAE-NPGRYVILSNIYASSGKR 561
+M ++PD S+L A +++ ++ + E P + L+ +YA G+
Sbjct: 214 RKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQV 273
Query: 562 IEANRIRALMK 572
A + MK
Sbjct: 274 ATAKILFDKMK 284
Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 106/246 (43%), Gaps = 28/246 (11%)
Query: 45 TCISSIKQCQTLQSLKTLHAFTLRSRFYHHHDLFLVTNLVSQYASLGSISHAFSLFSSVS 104
+ IS+ Q +L+ ++++ + RS + D+F+ + L+ +A GS+ A +F
Sbjct: 328 SAISACAQVGSLEQARSMYEYVGRSDY--RDDVFISSALIDMFAKCGSVEGARLVFDRTL 385
Query: 105 DSCDLFLWNVMIRAFVDNRQFDRSLQLYAQMRELDINPDKFTFPFVLKACGYLRDIEFGV 164
D D+ +W+ MI + + + ++ LY M ++P+ TF +L AC
Sbjct: 386 DR-DVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACN--------- 435
Query: 165 KVHKDAVDSGYW-----SDVFVGNS------LIAMYGKCGRVDVCRQLFDEMP-ERNVVT 212
H V G+W +D + +I + G+ G +D ++ MP + V
Sbjct: 436 --HSGMVREGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTV 493
Query: 213 WSSLTGAYAQNGCYEEGLLLFKRM--MDEGIRPNRVVILNAMACVRKVSEADDVCRVVVD 270
W +L A ++ E G +++ +D + V + N A R +V + +
Sbjct: 494 WGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKE 553
Query: 271 NGLDLD 276
GL+ D
Sbjct: 554 KGLNKD 559
>sp|Q9LW63|PP251_ARATH Putative pentatricopeptide repeat-containing protein At3g23330
OS=Arabidopsis thaliana GN=PCMP-H32 PE=3 SV=1
Length = 715
Score = 492 bits (1266), Expect = e-138, Method: Compositional matrix adjust.
Identities = 252/711 (35%), Positives = 396/711 (55%), Gaps = 65/711 (9%)
Query: 44 ETCISSIKQCQTLQSLKTLHAFTLRSRFYHHHDLFLVTNLVSQYASLGSISHAFSLFSSV 103
+T I + + ++ K LHA +R++ H +V ++ + L F S
Sbjct: 9 KTLIKNPTRIKSKSQAKQLHAQFIRTQSLSHTSASIVISIYTNLKLLHEALLLFKTLKSP 68
Query: 104 SDSCDLFLWNVMIRAFVDNRQFDRSLQLYAQMRELDINPDKFTFPFVLKACGYLRDIEFG 163
+ W +IR F D F ++L + +MR PD FP VLK+C + D+ FG
Sbjct: 69 P----VLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFG 124
Query: 164 VKVHKDAVDSGYWSDVFVGNSLIAMYGK---------CGRV------------------- 195
VH V G D++ GN+L+ MY K G V
Sbjct: 125 ESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAE 184
Query: 196 --------DVCRQLFDEMPERNVVTWSSLTGAYAQNGCYEEGLLLFKRMMDEGIRPNRVV 247
D R++F+ MP ++VV+++++ YAQ+G YE+ L + + M ++P+
Sbjct: 185 TCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFT 244
Query: 248 ILNAMACVRK---VSEADDVCRVVVDNGLDLDQSLQNAAMVMYARCGRMDMARRFFEGIL 304
+ + + + V + ++ V+ G+D D + ++ + MYA+ R++ + R F +
Sbjct: 245 LSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLY 304
Query: 305 NKDLVSWTSMIEAYAQADLPLEALEVYRQMILRRVLPDSVTFLGVIRACSSLASFQQART 364
+D +SW S++ Y Q EAL ++RQM+ +V P +V F VI AC+ LA+ +
Sbjct: 305 CRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQ 364
Query: 365 VHGIIIHCFLGNQLALDTAVVDLYVKCGSLMHARKVFDRMKQKNVISWSTMISGYGMHGH 424
+HG ++ G+ + + +A+VD+Y KCG++ ARK+FDRM + +SW+ +I G+ +HGH
Sbjct: 365 LHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGH 424
Query: 425 GREALFLFDQMKAL-IKPDHITFVSVLSACSHAGLIDEGWECFNSMLRDFGVAPRPEHYA 483
G EA+ LF++MK +KP+ + FV+VL+ACSH GL+DE W FNSM + +G+ EHYA
Sbjct: 425 GHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYA 484
Query: 484 CMVDMLGRAGKLNEAREFIERMPIRPDAGVWGSLLGACRIHSNVELAEMAAKALFDLDAE 543
+ D+LGRAGKL EA FI +M + P VW +LL +C +H N+ELAE A+ +F +D+E
Sbjct: 485 AVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSE 544
Query: 544 NPGRYVILSNIYASSGKRIEANRIRALMKRRGVKKITGHTVIEIKNKVHTFVAGDRSQPQ 603
N G YV++ N+YAS+G+ E ++R M+++G++K + IE+KNK H FV+GDRS P
Sbjct: 545 NMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPS 604
Query: 604 TELTYSELAKLMDRIRREGYTPDLN---------------------FPFVFGLLNSGPGS 642
+ L +M+++ +EGY D + FG++N+ PG+
Sbjct: 605 MDKINEFLKAVMEQMEKEGYVADTSGVLHDVDEEHKRELLFGHSERLAVAFGIINTEPGT 664
Query: 643 AIRIKKNLRVCGDCHTATKFISKVTGREIIVRDAHRFHHFKDGTCSCGDYW 693
IR+ KN+R+C DCH A KFISK+T REIIVRD RFHHF G CSCGDYW
Sbjct: 665 TIRVTKNIRICTDCHVAIKFISKITEREIIVRDNSRFHHFNRGNCSCGDYW 715
>sp|Q9SN39|PP320_ARATH Pentatricopeptide repeat-containing protein At4g18750,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H45 PE=2
SV=1
Length = 871
Score = 492 bits (1266), Expect = e-138, Method: Compositional matrix adjust.
Identities = 264/676 (39%), Positives = 397/676 (58%), Gaps = 30/676 (4%)
Query: 45 TCIS-SIKQCQTLQSLKTLHAFTLRSRFYHHHDLFLVTNLVSQYASLGSISHAFSLFSSV 103
+C+S S +++ + LH F L+S F + + +LV+ Y + A +F +
Sbjct: 199 SCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVG--NSLVAFYLKNQRVDSARKVFDEM 256
Query: 104 SDSCDLFLWNVMIRAFVDNRQFDRSLQLYAQMRELDINPDKFTFPFVLKACGYLRDIEFG 163
++ D+ WN +I +V N ++ L ++ QM I D T V C R I G
Sbjct: 257 TER-DVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLG 315
Query: 164 VKVHKDAVDSGYWSDVFVGNSLIAMYGKCGRVDVCRQLFDEMPERNVVTWSSLTGAYAQN 223
VH V + + + N+L+ MY KCG +D + +F EM +R+VV+++S+ YA+
Sbjct: 316 RAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYARE 375
Query: 224 GCYEEGLLLFKRMMDEGIRPNR---VVILNAMACVRKVSEADDVCRVVVDNGLDLDQSLQ 280
G E + LF+ M +EGI P+ +LN A R + E V + +N L D +
Sbjct: 376 GLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVS 435
Query: 281 NAAMVMYARCGRMDMARRFFEGILNKDLVSWTSMIEAYAQADLPLEALEVYRQMIL-RRV 339
NA M MYA+CG M A F + KD++SW ++I Y++ EAL ++ ++ +R
Sbjct: 436 NALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRF 495
Query: 340 LPDSVTFLGVIRACSSLASFQQARTVHGIIIHCFLGNQLALDTAVVDLYVKCGSLMHARK 399
PD T V+ AC+SL++F + R +HG I+ + + ++VD+Y KCG+L+ A
Sbjct: 496 SPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHM 555
Query: 400 VFDRMKQKNVISWSTMISGYGMHGHGREALFLFDQMK-ALIKPDHITFVSVLSACSHAGL 458
+FD + K+++SW+ MI+GYGMHG G+EA+ LF+QM+ A I+ D I+FVS+L ACSH+GL
Sbjct: 556 LFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGL 615
Query: 459 IDEGWECFNSMLRDFGVAPRPEHYACMVDMLGRAGKLNEAREFIERMPIRPDAGVWGSLL 518
+DEGW FN M + + P EHYAC+VDML R G L +A FIE MPI PDA +WG+LL
Sbjct: 616 VDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALL 675
Query: 519 GACRIHSNVELAEMAAKALFDLDAENPGRYVILSNIYASSGKRIEANRIRALMKRRGVKK 578
CRIH +V+LAE A+ +F+L+ EN G YV+++NIYA + K + R+R + +RG++K
Sbjct: 676 CGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRK 735
Query: 579 ITGHTVIEIKNKVHTFVAGDRSQPQTELTYSELAKLMDRIRREGYTPDLNFPFV------ 632
G + IEIK +V+ FVAGD S P+TE + L K+ R+ EGY+P + +
Sbjct: 736 NPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKVRARMIEEGYSPLTKYALIDAEEME 795
Query: 633 ---------------FGLLNSGPGSAIRIKKNLRVCGDCHTATKFISKVTGREIIVRDAH 677
G+++SG G IR+ KNLRVCGDCH KF+SK+T REI++RD++
Sbjct: 796 KEEALCGHSEKLAMALGIISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSN 855
Query: 678 RFHHFKDGTCSCGDYW 693
RFH FKDG CSC +W
Sbjct: 856 RFHQFKDGHCSCRGFW 871
Score = 228 bits (582), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 147/465 (31%), Positives = 235/465 (50%), Gaps = 16/465 (3%)
Query: 41 FDPETCISSIKQCQTLQSLKTLHAFTLRSRFYHHHDLFLVTNLVSQ----YASLGSISHA 96
DP T S ++ C +SLK F + + +NL S+ Y + G + A
Sbjct: 92 IDPRTLCSVLQLCADSKSLKDGKEV---DNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEA 148
Query: 97 FSLFSSVSDSCDLFLWNVMIRAFVDNRQFDRSLQLYAQMRELDINPDKFTFPFVLKACGY 156
+F V LF WN+++ + F S+ L+ +M + D +TF V K+
Sbjct: 149 SRVFDEVKIEKALF-WNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSS 207
Query: 157 LRDIEFGVKVHKDAVDSGYWSDVFVGNSLIAMYGKCGRVDVCRQLFDEMPERNVVTWSSL 216
LR + G ++H + SG+ VGNSL+A Y K RVD R++FDEM ER+V++W+S+
Sbjct: 208 LRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSI 267
Query: 217 TGAYAQNGCYEEGLLLFKRMMDEGIRPNRVVILNAMA-CV--RKVSEADDVCRVVVDNGL 273
Y NG E+GL +F +M+ GI + I++ A C R +S V + V
Sbjct: 268 INGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACF 327
Query: 274 DLDQSLQNAAMVMYARCGRMDMARRFFEGILNKDLVSWTSMIEAYAQADLPLEALEVYRQ 333
+ N + MY++CG +D A+ F + ++ +VS+TSMI YA+ L EA++++ +
Sbjct: 328 SREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEE 387
Query: 334 MILRRVLPDSVTFLGVIRACSSLASFQQARTVHGIIIHCFLGNQLALDTAVVDLYVKCGS 393
M + PD T V+ C+ + + VH I LG + + A++D+Y KCGS
Sbjct: 388 MEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGS 447
Query: 394 LMHARKVFDRMKQKNVISWSTMISGYGMHGHGREALFLFDQM--KALIKPDHITFVSVLS 451
+ A VF M+ K++ISW+T+I GY + + EAL LF+ + + PD T VL
Sbjct: 448 MQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLP 507
Query: 452 ACSHAGLIDEGWECFNSMLRDFGVAPRPEHYA-CMVDMLGRAGKL 495
AC+ D+G E ++R+ + R H A +VDM + G L
Sbjct: 508 ACASLSAFDKGREIHGYIMRNGYFSDR--HVANSLVDMYAKCGAL 550
>sp|O82380|PP175_ARATH Pentatricopeptide repeat-containing protein At2g29760,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2
SV=1
Length = 738
Score = 483 bits (1242), Expect = e-135, Method: Compositional matrix adjust.
Identities = 255/725 (35%), Positives = 411/725 (56%), Gaps = 68/725 (9%)
Query: 32 SSPQQQTEFFDPETCISSIKQCQTLQSLKTLHAFTLRSRFYHHHDLFLVTNLVSQYA--S 89
S+P Q T + IS I++C +L+ LK H +R+ + D + + L + A S
Sbjct: 19 SNPNQPTTNNERSRHISLIERCVSLRQLKQTHGHMIRTGTFS--DPYSASKLFAMAALSS 76
Query: 90 LGSISHAFSLFSSVSDSCDLFLWNVMIRAFVDNRQFDRSLQLYA---QMRELDINPDKFT 146
S+ +A +F + + F WN +IRA+ D L ++A + E P+K+T
Sbjct: 77 FASLEYARKVFDEIPKP-NSFAWNTLIRAYASGP--DPVLSIWAFLDMVSESQCYPNKYT 133
Query: 147 FPFVLKACGYLRDIEFGVKVHKDAVDSGYWSDVFVGNSLIAMYGKCGRVDVCRQLFDEMP 206
FPF++KA + + G +H AV S SDVFV NSLI Y CG +D ++F +
Sbjct: 134 FPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIK 193
Query: 207 ERNVVTWSSLTGAYAQNGCYEEGLLLFKRMMDEGIRPNRVV---ILNAMACVRKVSEADD 263
E++VV+W+S+ + Q G ++ L LFK+M E ++ + V +L+A A +R +
Sbjct: 194 EKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQ 253
Query: 264 VCRVVVDNGLDLDQSLQNAAMVMYARCGRMDMARRFFEGILNKDLVSWTSMIEAYA---- 319
VC + +N ++++ +L NA + MY +CG ++ A+R F+ + KD V+WT+M++ YA
Sbjct: 254 VCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISED 313
Query: 320 ------------QADL---------------PLEALEVYRQMILRRVLP-DSVTFLGVIR 351
Q D+ P EAL V+ ++ L++ + + +T + +
Sbjct: 314 YEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLS 373
Query: 352 ACSSLASFQQARTVHGIIIHCFLGNQLALDTAVVDLYVKCGSLMHARKVFDRMKQKNVIS 411
AC+ + + + R +H I + + +A++ +Y KCG L +R+VF+ +++++V
Sbjct: 374 ACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFV 433
Query: 412 WSTMISGYGMHGHGREALFLFDQMK-ALIKPDHITFVSVLSACSHAGLIDEGWECFNSML 470
WS MI G MHG G EA+ +F +M+ A +KP+ +TF +V ACSH GL+DE F+ M
Sbjct: 434 WSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQME 493
Query: 471 RDFGVAPRPEHYACMVDMLGRAGKLNEAREFIERMPIRPDAGVWGSLLGACRIHSNVELA 530
++G+ P +HYAC+VD+LGR+G L +A +FIE MPI P VWG+LLGAC+IH+N+ LA
Sbjct: 494 SNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLA 553
Query: 531 EMAAKALFDLDAENPGRYVILSNIYASSGKRIEANRIRALMKRRGVKKITGHTVIEIKNK 590
EMA L +L+ N G +V+LSNIYA GK + +R M+ G+KK G + IEI
Sbjct: 554 EMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGM 613
Query: 591 VHTFVAGDRSQPQTELTYSELAKLMDRIRREGYTPDLN---------------------- 628
+H F++GD + P +E Y +L ++M++++ GY P+++
Sbjct: 614 IHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPEISQVLQIIEEEEMKEQSLNLHSEK 673
Query: 629 FPFVFGLLNSGPGSAIRIKKNLRVCGDCHTATKFISKVTGREIIVRDAHRFHHFKDGTCS 688
+GL+++ IR+ KNLRVCGDCH+ K IS++ REIIVRD +RFHHF++G CS
Sbjct: 674 LAICYGLISTEAPKVIRVIKNLRVCGDCHSVAKLISQLYDREIIVRDRYRFHHFRNGQCS 733
Query: 689 CGDYW 693
C D+W
Sbjct: 734 CNDFW 738
>sp|P0C899|PP271_ARATH Putative pentatricopeptide repeat-containing protein At3g49142
OS=Arabidopsis thaliana GN=PCMP-H77 PE=3 SV=1
Length = 686
Score = 481 bits (1237), Expect = e-135, Method: Compositional matrix adjust.
Identities = 264/710 (37%), Positives = 396/710 (55%), Gaps = 64/710 (9%)
Query: 15 LTKFCHLRQQWRLFFSASSPQQQTEFFDPETCISSIKQC----QTLQSLKTLHAFTLRSR 70
L F R+ S+S P+ + + P+ + + Q +++L+T+H+ +
Sbjct: 10 LLHFPKFRKFQSRKVSSSLPKLELDQKSPQETVFLLGQVLDTYPDIRTLRTVHSRIILED 69
Query: 71 FYHHHDLFLVTNLVSQYASLGSISHAFSLFSSVSDSCDLFLWNVMIRAFVDNRQFDRSLQ 130
+ L + L+ YASL ++ A +F + + ++ + NVMIR++V+N + ++
Sbjct: 70 LRCNSSLGV--KLMRAYASLKDVASARKVFDEIPER-NVIIINVMIRSYVNNGFYGEGVK 126
Query: 131 LYAQMRELDINPDKFTFPFVLKACGYLRDIEFGVKVHKDAVDSGYWSDVFVGNSLIAMYG 190
++ M ++ PD +TFP VLKAC I G K+H A G S +FVGN L++MYG
Sbjct: 127 VFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYG 186
Query: 191 KCGRVDVCRQLFDEMPERNVVTWSSLTGAYAQNGCYEEGLLLFKRMMDEGIRPNRVVILN 250
KCG + R + DEM R+VV+W+SL YAQN +++ L + + M I + + +
Sbjct: 187 KCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMAS 246
Query: 251 AMACVRKVSEADDVCRVVVDNGLDLDQSLQNAAMVMYARCGRMDMARRFFEGILNKDLVS 310
+ V + + VMY + DM FF+ + K LVS
Sbjct: 247 LLPAVSNTTTEN----------------------VMYVK----DM---FFK-MGKKSLVS 276
Query: 311 WTSMIEAYAQADLPLEALEVYRQMILRRVLPDSVTFLGVIRACSSLASFQQARTVHGIII 370
W MI Y + +P+EA+E+Y +M PD+V+ V+ AC ++ + +HG I
Sbjct: 277 WNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIE 336
Query: 371 HCFLGNQLALDTAVVDLYVKCGSLMHARKVFDRMKQKNVISWSTMISGYGMHGHGREALF 430
L L L+ A++D+Y KCG L AR VF+ MK ++V+SW+ MIS YG G G +A+
Sbjct: 337 RKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVA 396
Query: 431 LFDQMK-ALIKPDHITFVSVLSACSHAGLIDEGWECFNSMLRDFGVAPRPEHYACMVDML 489
LF +++ + + PD I FV+ L+ACSHAGL++EG CF M + + PR EH ACMVD+L
Sbjct: 397 LFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLL 456
Query: 490 GRAGKLNEAREFIERMPIRPDAGVWGSLLGACRIHSNVELAEMAAKALFDLDAENPGRYV 549
GRAGK+ EA FI+ M + P+ VWG+LLGACR+HS+ ++ +AA LF L E G YV
Sbjct: 457 GRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYV 516
Query: 550 ILSNIYASSGKRIEANRIRALMKRRGVKKITGHTVIEIKNKVHTFVAGDRSQPQTELTYS 609
+LSNIYA +G+ E IR +MK +G+KK G + +E+ +HTF+ GDRS PQ++ Y
Sbjct: 517 LLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEIYR 576
Query: 610 ELAKLMDRIRREGYTPDL---------------------NFPFVFGLLNS-----GPGSA 643
EL L+ +++ GY PD VF L+N+ +
Sbjct: 577 ELDVLVKKMKELGYVPDSESALHDVEEEDKETHLAVHSEKLAIVFALMNTKEEEEDSNNT 636
Query: 644 IRIKKNLRVCGDCHTATKFISKVTGREIIVRDAHRFHHFKDGTCSCGDYW 693
IRI KNLR+CGDCH A K IS++T REII+RD +RFH F+ G CSCGDYW
Sbjct: 637 IRITKNLRICGDCHVAAKLISQITSREIIIRDTNRFHVFRFGVCSCGDYW 686
>sp|O81767|PP348_ARATH Pentatricopeptide repeat-containing protein At4g33990
OS=Arabidopsis thaliana GN=EMB2758 PE=3 SV=2
Length = 823
Score = 473 bits (1216), Expect = e-132, Method: Compositional matrix adjust.
Identities = 256/686 (37%), Positives = 396/686 (57%), Gaps = 48/686 (6%)
Query: 42 DPETCISSIKQCQTLQSLKTLHAFTLRSRFYHHHDLFLVTNLVSQYASLGSISHAFSLFS 101
D T S +K C+T+ +H L+ F D+++ +L+ Y+ ++ +A LF
Sbjct: 152 DYRTFPSVLKACRTVIDGNKIHCLALKFGFMW--DVYVAASLIHLYSRYKAVGNARILFD 209
Query: 102 SVSDSCDLFLWNVMIRAFVDNRQFDRSLQLYAQMRELDINPDKFTFPFVLKACGYLRDIE 161
+ D+ WN MI + + +L L +R +D T +L AC D
Sbjct: 210 EMPVR-DMGSWNAMISGYCQSGNAKEALTLSNGLRAMD----SVTVVSLLSACTEAGDFN 264
Query: 162 FGVKVHKDAVDSGYWSDVFVGNSLIAMYGKCGRVDVCRQLFDEMPERNVVTWSSLTGAYA 221
GV +H ++ G S++FV N LI +Y + GR+ C+++FD M R++++W+S+ AY
Sbjct: 265 RGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYE 324
Query: 222 QNGCYEEGLLLFKRMMDEGIRPNRVVILNAMACVRKVSEADDVCRVVVDNGLDL------ 275
N + LF+ M I+P+ + +++ + + ++ + CR V G L
Sbjct: 325 LNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIR-ACRSV--QGFTLRKGWFL 381
Query: 276 -DQSLQNAAMVMYARCGRMDMARRFFEGILNKDLVSWTSMIEAYAQADLPLEALEVYRQM 334
D ++ NA +VMYA+ G +D AR F + N D++SW ++I YAQ EA+E+Y M
Sbjct: 382 EDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIM 441
Query: 335 ILR-RVLPDSVTFLGVIRACSSLASFQQARTVHGIIIHCFLGNQLALD----TAVVDLYV 389
+ + T++ V+ ACS + +Q +HG + L N L LD T++ D+Y
Sbjct: 442 EEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRL----LKNGLYLDVFVVTSLADMYG 497
Query: 390 KCGSLMHARKVFDRMKQKNVISWSTMISGYGMHGHGREALFLFDQM-KALIKPDHITFVS 448
KCG L A +F ++ + N + W+T+I+ +G HGHG +A+ LF +M +KPDHITFV+
Sbjct: 498 KCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVT 557
Query: 449 VLSACSHAGLIDEGWECFNSMLRDFGVAPRPEHYACMVDMLGRAGKLNEAREFIERMPIR 508
+LSACSH+GL+DEG CF M D+G+ P +HY CMVDM GRAG+L A +FI+ M ++
Sbjct: 558 LLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQ 617
Query: 509 PDAGVWGSLLGACRIHSNVELAEMAAKALFDLDAENPGRYVILSNIYASSGKRIEANRIR 568
PDA +WG+LL ACR+H NV+L ++A++ LF+++ E+ G +V+LSN+YAS+GK + IR
Sbjct: 618 PDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIR 677
Query: 569 ALMKRRGVKKITGHTVIEIKNKVHTFVAGDRSQPQTELTYSELAKLMDRIRREGYTPDLN 628
++ +G++K G + +E+ NKV F G+++ P E Y EL L +++ GY PD
Sbjct: 678 SIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALQAKLKMIGYVPDHR 737
Query: 629 F---------------------PFVFGLLNSGPGSAIRIKKNLRVCGDCHTATKFISKVT 667
F F L+ + + IRI KNLRVCGDCH+ TKFISK+T
Sbjct: 738 FVLQDVEDDEKEHILMSHSERLAIAFALIATPAKTTIRIFKNLRVCGDCHSVTKFISKIT 797
Query: 668 GREIIVRDAHRFHHFKDGTCSCGDYW 693
REIIVRD++RFHHFK+G CSCGDYW
Sbjct: 798 EREIIVRDSNRFHHFKNGVCSCGDYW 823
Score = 225 bits (573), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 154/501 (30%), Positives = 262/501 (52%), Gaps = 29/501 (5%)
Query: 51 KQCQTLQSLKTLHAFTLRSRFYHHHDLFLVTNLVSQYASLGSISHAFSLFSSVSDSCDLF 110
+ C LQS K LHA + S+ ++ + LV+ Y LG+++ A F + + D++
Sbjct: 62 RYCTNLQSAKCLHARLVVSK--QIQNVCISAKLVNLYCYLGNVALARHTFDHIQNR-DVY 118
Query: 111 LWNVMIRAFV---DNRQFDRSLQLYAQMRELDINPDKFTFPFVLKACGYLRDIEFGVKVH 167
WN+MI + ++ + R L+ M + PD TFP VLKAC R + G K+H
Sbjct: 119 AWNLMISGYGRAGNSSEVIRCFSLF--MLSSGLTPDYRTFPSVLKAC---RTVIDGNKIH 173
Query: 168 KDAVDSGYWSDVFVGNSLIAMYGKCGRVDVCRQLFDEMPERNVVTWSSLTGAYAQNGCYE 227
A+ G+ DV+V SLI +Y + V R LFDEMP R++ +W+++ Y Q+G +
Sbjct: 174 CLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAK 233
Query: 228 EGLLLFKRMMDEGIRPNRVVILNAMACVRKVSEADDVCRVV------VDNGLDLDQSLQN 281
E L L G+R V + ++ + +EA D R V + +GL+ + + N
Sbjct: 234 EALTL-----SNGLRAMDSVTV--VSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSN 286
Query: 282 AAMVMYARCGRMDMARRFFEGILNKDLVSWTSMIEAYAQADLPLEALEVYRQMILRRVLP 341
+ +YA GR+ ++ F+ + +DL+SW S+I+AY + PL A+ ++++M L R+ P
Sbjct: 287 KLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQP 346
Query: 342 DSVTFLGVIRACSSLASFQQARTVHGIIIH-CFLGNQLALDTAVVDLYVKCGSLMHARKV 400
D +T + + S L + R+V G + + + + AVV +Y K G + AR V
Sbjct: 347 DCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAV 406
Query: 401 FDRMKQKNVISWSTMISGYGMHGHGREALFLFDQM--KALIKPDHITFVSVLSACSHAGL 458
F+ + +VISW+T+ISGY +G EA+ +++ M + I + T+VSVL ACS AG
Sbjct: 407 FNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGA 466
Query: 459 IDEGWECFNSMLRDFGVAPRPEHYACMVDMLGRAGKLNEAREFIERMPIRPDAGVWGSLL 518
+ +G + +L++ G+ + DM G+ G+L +A ++P R ++ W +L+
Sbjct: 467 LRQGMKLHGRLLKN-GLYLDVFVVTSLADMYGKCGRLEDALSLFYQIP-RVNSVPWNTLI 524
Query: 519 GACRIHSNVELAEMAAKALFD 539
H + E A M K + D
Sbjct: 525 ACHGFHGHGEKAVMLFKEMLD 545
Score = 72.0 bits (175), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 93/196 (47%), Gaps = 10/196 (5%)
Query: 349 VIRACSSLASFQQARTVHGIIIHCFLGNQLALDTAVVDLYVKCGSLMHARKVFDRMKQKN 408
+ R C++L Q A+ +H ++ + + +V+LY G++ AR FD ++ ++
Sbjct: 60 LFRYCTNL---QSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRD 116
Query: 409 VISWSTMISGYGMHGHGREALFLFD--QMKALIKPDHITFVSVLSACSHAGLIDEGWECF 466
V +W+ MISGYG G+ E + F + + + PD+ TF SVL AC +ID
Sbjct: 117 VYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACR--TVIDG--NKI 172
Query: 467 NSMLRDFGVAPRPEHYACMVDMLGRAGKLNEAREFIERMPIRPDAGVWGSLLGACRIHSN 526
+ + FG A ++ + R + AR + MP+R D G W +++ N
Sbjct: 173 HCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVR-DMGSWNAMISGYCQSGN 231
Query: 527 VELAEMAAKALFDLDA 542
+ A + L +D+
Sbjct: 232 AKEALTLSNGLRAMDS 247
>sp|Q9SUH6|PP341_ARATH Pentatricopeptide repeat-containing protein At4g30700
OS=Arabidopsis thaliana GN=DYW9 PE=2 SV=1
Length = 792
Score = 469 bits (1207), Expect = e-131, Method: Compositional matrix adjust.
Identities = 244/647 (37%), Positives = 364/647 (56%), Gaps = 36/647 (5%)
Query: 76 DLFLVTNLVSQYASLGSISHAFSLFSSVSDSCDLFLWNVMIRAFVDNRQFDRSLQLYAQM 135
+L L +N+V Y + A +F + + D LWN MI + N + S+Q++ +
Sbjct: 153 ELLLGSNIVKMYFKFWRVEDARKVFDRMPEK-DTILWNTMISGYRKNEMYVESIQVFRDL 211
Query: 136 -RELDINPDKFTFPFVLKACGYLRDIEFGVKVHKDAVDSGYWSDVFVGNSLIAMYGKCGR 194
E D T +L A L+++ G+++H A +G +S +V I++Y KCG+
Sbjct: 212 INESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGK 271
Query: 195 VDVCRQLFDEMPERNVVTWSSLTGAYAQNGCYEEGLLLFKRMMDEGIRPNRVVILNAMAC 254
+ + LF E + ++V ++++ Y NG E L LFK +M G R L +
Sbjct: 272 IKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGAR------LRSSTL 325
Query: 255 VRKVSEADDVCRVVVDNGLDLDQ------SLQNAAMVMYARCGRMDMARRFFEGILNKDL 308
V V + + + +G L S+ A +Y++ ++ AR+ F+ K L
Sbjct: 326 VSLVPVSGHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSL 385
Query: 309 VSWTSMIEAYAQADLPLEALEVYRQMILRRVLPDSVTFLGVIRACSSLASFQQARTVHGI 368
SW +MI Y Q L +A+ ++R+M P+ VT ++ AC+ L + + VH +
Sbjct: 386 PSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDL 445
Query: 369 IIHCFLGNQLALDTAVVDLYVKCGSLMHARKVFDRMKQKNVISWSTMISGYGMHGHGREA 428
+ + + + TA++ +Y KCGS+ AR++FD M +KN ++W+TMISGYG+HG G+EA
Sbjct: 446 VRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEA 505
Query: 429 LFLFDQM-KALIKPDHITFVSVLSACSHAGLIDEGWECFNSMLRDFGVAPRPEHYACMVD 487
L +F +M + I P +TF+ VL ACSHAGL+ EG E FNSM+ +G P +HYACMVD
Sbjct: 506 LNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVD 565
Query: 488 MLGRAGKLNEAREFIERMPIRPDAGVWGSLLGACRIHSNVELAEMAAKALFDLDAENPGR 547
+LGRAG L A +FIE M I P + VW +LLGACRIH + LA ++ LF+LD +N G
Sbjct: 566 ILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGY 625
Query: 548 YVILSNIYASSGKRIEANRIRALMKRRGVKKITGHTVIEIKNKVHTFVAGDRSQPQTELT 607
+V+LSNI+++ +A +R K+R + K G+T+IEI H F +GD+S PQ +
Sbjct: 626 HVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKEI 685
Query: 608 YSELAKLMDRIRREGYTPDLNFPF---------------------VFGLLNSGPGSAIRI 646
Y +L KL ++R GY P+ FGL+ + PG+ IRI
Sbjct: 686 YEKLEKLEGKMREAGYQPETELALHDVEEEERELMVKVHSERLAIAFGLIATEPGTEIRI 745
Query: 647 KKNLRVCGDCHTATKFISKVTGREIIVRDAHRFHHFKDGTCSCGDYW 693
KNLRVC DCHT TK ISK+T R I+VRDA+RFHHFKDG CSCGDYW
Sbjct: 746 IKNLRVCLDCHTVTKLISKITERVIVVRDANRFHHFKDGVCSCGDYW 792
Score = 197 bits (501), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 125/502 (24%), Positives = 244/502 (48%), Gaps = 16/502 (3%)
Query: 30 SASSPQQQTEFFDPETCISSIKQCQTLQSLKTLHAFTLRSRFYHHHDLFLVTNLVSQYAS 89
S+++ + T + K+ ++ L HA + F +D+ L+T L + +
Sbjct: 7 SSATAETTAALISKNTYLDFFKRSTSISHLAQTHAQIILHGF--RNDISLLTKLTQRLSD 64
Query: 90 LGSISHAFSLFSSVSDSCDLFLWNVMIRAFVDNRQFDRSLQLYAQMRE-LDINPDKFTFP 148
LG+I +A +F SV D+FL+NV++R F N SL ++A +R+ D+ P+ T+
Sbjct: 65 LGAIYYARDIFLSVQRP-DVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYA 123
Query: 149 FVLKACGYLRDIEFGVKVHKDAVDSGYWSDVFVGNSLIAMYGKCGRVDVCRQLFDEMPER 208
F + A RD G +H AV G S++ +G++++ MY K RV+ R++FD MPE+
Sbjct: 124 FAISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEK 183
Query: 209 NVVTWSSLTGAYAQNGCYEEGLLLFKRMMDEG-IRPNRVVILNAMACVRKVSE---ADDV 264
+ + W+++ Y +N Y E + +F+ +++E R + +L+ + V ++ E +
Sbjct: 184 DTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQI 243
Query: 265 CRVVVDNGLDLDQSLQNAAMVMYARCGRMDMARRFFEGILNKDLVSWTSMIEAYAQADLP 324
+ G + + +Y++CG++ M F D+V++ +MI Y
Sbjct: 244 HSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGET 303
Query: 325 LEALEVYRQMILRRVLPDSVTFLGVIRACSSLASFQQARTVHGIIIHCFLGNQLALDTAV 384
+L ++++++L S T + ++ L +HG + + ++ TA+
Sbjct: 304 ELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLIY---AIHGYCLKSNFLSHASVSTAL 360
Query: 385 VDLYVKCGSLMHARKVFDRMKQKNVISWSTMISGYGMHGHGREALFLFDQM-KALIKPDH 443
+Y K + ARK+FD +K++ SW+ MISGY +G +A+ LF +M K+ P+
Sbjct: 361 TTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNP 420
Query: 444 ITFVSVLSACSHAGLIDEG-WECFNSMLRDFGVAPRPEHYACMVDMLGRAGKLNEAREFI 502
+T +LSAC+ G + G W + ++R ++ M + G + EAR
Sbjct: 421 VTITCILSACAQLGALSLGKW--VHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLF 478
Query: 503 ERMPIRPDAGVWGSLLGACRIH 524
+ M + + W +++ +H
Sbjct: 479 DLMTKKNEV-TWNTMISGYGLH 499
>sp|Q9SR82|PP219_ARATH Putative pentatricopeptide repeat-containing protein At3g08820
OS=Arabidopsis thaliana GN=PCMP-H84 PE=3 SV=1
Length = 685
Score = 469 bits (1207), Expect = e-131, Method: Compositional matrix adjust.
Identities = 247/690 (35%), Positives = 392/690 (56%), Gaps = 38/690 (5%)
Query: 30 SASSPQQQTEFFDPETCISSIKQCQTLQSLKTLHAFTLRSRFYHHHDLFLVTNLVSQYAS 89
SA+S QQ + C T+ LK +H + HHD FLV L+ +
Sbjct: 8 SATSKVQQIKTLISVAC--------TVNHLKQIHVSLINHHL--HHDTFLVNLLLKRTLF 57
Query: 90 LGSISHAFSLFSSVSDSCDLFLWNVMIRAFVDNRQFDRSLQLYAQMRELDINPDKFTFPF 149
+++ LFS + ++FL+N +I FV+N F +L L+ +R+ + FTFP
Sbjct: 58 FRQTKYSYLLFSH-TQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPL 116
Query: 150 VLKACGYLRDIEFGVKVHKDAVDSGYWSDVFVGNSLIAMYGKCGRVDVCRQLFDEMPERN 209
VLKAC + G+ +H V G+ DV SL+++Y GR++ +LFDE+P+R+
Sbjct: 117 VLKACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRS 176
Query: 210 VVTWSSLTGAYAQNGCYEEGLLLFKRMMDEGIRPNRVVILNAMACVRKVSEADD---VCR 266
VVTW++L Y +G + E + LFK+M++ G++P+ I+ ++ V + D + +
Sbjct: 177 VVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVK 236
Query: 267 VVVDNGLDLDQSLQNAAMVMYARCGRMDMARRFFEGILNKDLVSWTSMIEAYAQADLPLE 326
+ + + + ++ + +YA+CG+M+ AR F+ ++ KD+V+W++MI+ YA P E
Sbjct: 237 YMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKE 296
Query: 327 ALEVYRQMILRRVLPDSVTFLGVIRACSSLASFQQAR-TVHGIIIHCFLGNQLALDTAVV 385
+E++ QM+ + PD + +G + +C+SL + + I H FL N L + A++
Sbjct: 297 GIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTN-LFMANALI 355
Query: 386 DLYVKCGSLMHARKVFDRMKQKNVISWSTMISGYGMHGHGREALFLFDQMKAL-IKPDHI 444
D+Y KCG++ +VF MK+K+++ + ISG +GH + + +F Q + L I PD
Sbjct: 356 DMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGS 415
Query: 445 TFVSVLSACSHAGLIDEGWECFNSMLRDFGVAPRPEHYACMVDMLGRAGKLNEAREFIER 504
TF+ +L C HAGLI +G FN++ + + EHY CMVD+ GRAG L++A I
Sbjct: 416 TFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICD 475
Query: 505 MPIRPDAGVWGSLLGACRIHSNVELAEMAAKALFDLDAENPGRYVILSNIYASSGKRIEA 564
MP+RP+A VWG+LL CR+ + +LAE K L L+ N G YV LSNIY+ G+ EA
Sbjct: 476 MPMRPNAIVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEA 535
Query: 565 NRIRALMKRRGVKKITGHTVIEIKNKVHTFVAGDRSQPQTELTYSELAKLMDRIRREGYT 624
+R +M ++G+KKI G++ IE++ KVH F+A D+S P ++ Y++L L + +R G+
Sbjct: 536 AEVRDMMNKKGMKKIPGYSWIELEGKVHEFLADDKSHPLSDKIYAKLEDLGNEMRLMGFV 595
Query: 625 PDLNFPF---------------------VFGLLNSGPGSAIRIKKNLRVCGDCHTATKFI 663
P F F GL+++ G IR+ KNLRVCGDCH K I
Sbjct: 596 PTTEFVFFDVEEEEKERVLGYHSEKLAVALGLISTDHGQVIRVVKNLRVCGDCHEVMKLI 655
Query: 664 SKVTGREIIVRDAHRFHHFKDGTCSCGDYW 693
SK+T REI+VRD +RFH F +G+CSC DYW
Sbjct: 656 SKITRREIVVRDNNRFHCFTNGSCSCNDYW 685
>sp|Q9LNU6|PPR53_ARATH Pentatricopeptide repeat-containing protein At1g20230
OS=Arabidopsis thaliana GN=PCMP-H21 PE=2 SV=2
Length = 760
Score = 467 bits (1201), Expect = e-130, Method: Compositional matrix adjust.
Identities = 254/756 (33%), Positives = 412/756 (54%), Gaps = 104/756 (13%)
Query: 34 PQQQTEFFDPETCISSIKQCQTLQSLKTLHAFTLRSRFYHHHDLFLVTNLVSQYASLGSI 93
PQ F + + S +T Q+ HA L+S +D ++ L++ Y++
Sbjct: 13 PQSIVGFLESSSYHWSSSLSKTTQA----HARILKSG--AQNDGYISAKLIASYSNYNCF 66
Query: 94 SHAFSLFSSVSDSCDLFLWNVMIRAFVDNRQFDRSLQLYAQMRELDINPDKFTFPFVLKA 153
+ A + S+ D ++ ++ +I A + F +S+ ++++M + PD P + K
Sbjct: 67 NDADLVLQSIPDP-TIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKV 125
Query: 154 CGYLRDIEFGVKVHKDAVDSGYWSDVFVGNSLIAMYGKCGRVDVCRQLFDEMPERNVVTW 213
C L + G ++H + SG D FV S+ MY +CGR+ R++FD M +++VVT
Sbjct: 126 CAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTC 185
Query: 214 SSLTGAYAQNGCYEE-----------------------------------GLLLFKRMMD 238
S+L AYA+ GC EE +++F+++
Sbjct: 186 SALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHH 245
Query: 239 EGIRPNRVVILNAMACVRKVSEADDVCRV----VVDNGLDLDQSLQNAAMVMYARCGR-- 292
G P++V + + + V SE ++ R+ V+ GL D+ + +A + MY + G
Sbjct: 246 LGFCPDQVTVSSVLPSVGD-SEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVY 304
Query: 293 ---------------------------------MDMARRFFEGILNKDLVSWTSMIEAYA 319
++M F E + ++VSWTS+I A
Sbjct: 305 GIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCA 364
Query: 320 QADLPLEALEVYRQMILRRVLPDSVTFLGVIRACSSLASFQQARTVHGIIIHCFLGNQLA 379
Q +EALE++R+M + V P+ VT ++ AC ++A+ R+ HG + L + +
Sbjct: 365 QNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVH 424
Query: 380 LDTAVVDLYVKCGSLMHARKVFDRMKQKNVISWSTMISGYGMHGHGREALFLFDQ-MKAL 438
+ +A++D+Y KCG + ++ VF+ M KN++ W+++++G+ MHG +E + +F+ M+
Sbjct: 425 VGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTR 484
Query: 439 IKPDHITFVSVLSACSHAGLIDEGWECFNSMLRDFGVAPRPEHYACMVDMLGRAGKLNEA 498
+KPD I+F S+LSAC GL DEGW+ F M ++G+ PR EHY+CMV++LGRAGKL EA
Sbjct: 485 LKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEA 544
Query: 499 REFIERMPIRPDAGVWGSLLGACRIHSNVELAEMAAKALFDLDAENPGRYVILSNIYASS 558
+ I+ MP PD+ VWG+LL +CR+ +NV+LAE+AA+ LF L+ ENPG YV+LSNIYA+
Sbjct: 545 YDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAK 604
Query: 559 GKRIEANRIRALMKRRGVKKITGHTVIEIKNKVHTFVAGDRSQPQTELTYSELAKLMDRI 618
G E + IR M+ G+KK G + I++KN+V+T +AGD+S PQ + ++ ++ +
Sbjct: 605 GMWTEVDSIRNKMESLGLKKNPGCSWIQVKNRVYTLLAGDKSHPQIDQITEKMDEISKEM 664
Query: 619 RREGYTPDLNFPF---------------------VFGLLNSGPGSAIRIKKNLRVCGDCH 657
R+ G+ P+L+F VFGLLN+ G+ +++ KNLR+CGDCH
Sbjct: 665 RKSGHRPNLDFALHDVEEQEQEQMLWGHSEKLAVVFGLLNTPDGTPLQVIKNLRICGDCH 724
Query: 658 TATKFISKVTGREIIVRDAHRFHHFKDGTCSCGDYW 693
KFIS GREI +RD +RFHHFKDG CSCGD+W
Sbjct: 725 AVIKFISSYAGREIFIRDTNRFHHFKDGICSCGDFW 760
>sp|Q9SVP7|PP307_ARATH Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis
thaliana GN=PCMP-H42 PE=2 SV=2
Length = 1064
Score = 463 bits (1192), Expect = e-129, Method: Compositional matrix adjust.
Identities = 247/680 (36%), Positives = 382/680 (56%), Gaps = 31/680 (4%)
Query: 42 DPETCISSIKQCQ---TLQSLKTLHAFTLRSRFYHHHDLFLVTNLVSQYASLGSISHAFS 98
D T S + C TL + LHA+T + F ++ + L++ YA I A
Sbjct: 388 DSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKI--EGALLNLYAKCADIETALD 445
Query: 99 LFSSVSDSCDLFLWNVMIRAFVDNRQFDRSLQLYAQMRELDINPDKFTFPFVLKACGYLR 158
F ++ ++ LWNVM+ A+ S +++ QM+ +I P+++T+P +LK C L
Sbjct: 446 YFLE-TEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLG 504
Query: 159 DIEFGVKVHKDAVDSGYWSDVFVGNSLIAMYGKCGRVDVCRQLFDEMPERNVVTWSSLTG 218
D+E G ++H + + + + +V + LI MY K G++D + ++VV+W+++
Sbjct: 505 DLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIA 564
Query: 219 AYAQNGCYEEGLLLFKRMMDEGIRPNRVVILNAM-AC--VRKVSEADDVCRVVVDNGLDL 275
Y Q ++ L F++M+D GIR + V + NA+ AC ++ + E + +G
Sbjct: 565 GYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSS 624
Query: 276 DQSLQNAAMVMYARCGRMDMARRFFEGILNKDLVSWTSMIEAYAQADLPLEALEVYRQMI 335
D QNA + +Y+RCG+++ + FE D ++W +++ + Q+ EAL V+ +M
Sbjct: 625 DLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMN 684
Query: 336 LRRVLPDSVTFLGVIRACSSLASFQQARTVHGIIIHCFLGNQLALDTAVVDLYVKCGSLM 395
+ ++ TF ++A S A+ +Q + VH +I ++ + A++ +Y KCGS+
Sbjct: 685 REGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSIS 744
Query: 396 HARKVFDRMKQKNVISWSTMISGYGMHGHGREALFLFDQM-KALIKPDHITFVSVLSACS 454
A K F + KN +SW+ +I+ Y HG G EAL FDQM + ++P+H+T V VLSACS
Sbjct: 745 DAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACS 804
Query: 455 HAGLIDEGWECFNSMLRDFGVAPRPEHYACMVDMLGRAGKLNEAREFIERMPIRPDAGVW 514
H GL+D+G F SM ++G++P+PEHY C+VDML RAG L+ A+EFI+ MPI+PDA VW
Sbjct: 805 HIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVW 864
Query: 515 GSLLGACRIHSNVELAEMAAKALFDLDAENPGRYVILSNIYASSGKRIEANRIRALMKRR 574
+LL AC +H N+E+ E AA L +L+ E+ YV+LSN+YA S K + R MK +
Sbjct: 865 RTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEK 924
Query: 575 GVKKITGHTVIEIKNKVHTFVAGDRSQPQTELTYSELAKLMDRIRREGYTPD----LN-- 628
GVKK G + IE+KN +H+F GD++ P + + L R GY D LN
Sbjct: 925 GVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQDLTKRASEIGYVQDCFSLLNEL 984
Query: 629 ---------------FPFVFGLLNSGPGSAIRIKKNLRVCGDCHTATKFISKVTGREIIV 673
FGLL+ I + KNLRVC DCH KF+SKV+ REIIV
Sbjct: 985 QHEQKDPIIFIHSEKLAISFGLLSLPATVPINVMKNLRVCNDCHAWIKFVSKVSNREIIV 1044
Query: 674 RDAHRFHHFKDGTCSCGDYW 693
RDA+RFHHF+ G CSC DYW
Sbjct: 1045 RDAYRFHHFEGGACSCKDYW 1064
Score = 174 bits (440), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 114/484 (23%), Positives = 229/484 (47%), Gaps = 9/484 (1%)
Query: 45 TCISSIKQCQTLQSLKTLHAFTLRSRFYHHHDLFLVTNLVSQYASLGSISHAFSLFSSVS 104
+ +S+ K+ ++L+ + LH L+ F D ++ LVS Y LG++ A +FS++S
Sbjct: 293 SVLSACKKIESLEIGEQLHGLVLKLGF--SSDTYVCNALVSLYFHLGNLISAEHIFSNMS 350
Query: 105 DSCDLFLWNVMIRAFVDNRQFDRSLQLYAQMRELDINPDKFTFPFVLKACGYLRDIEFGV 164
D +N +I +++++L+ +M + PD T ++ AC + G
Sbjct: 351 QR-DAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQ 409
Query: 165 KVHKDAVDSGYWSDVFVGNSLIAMYGKCGRVDVCRQLFDEMPERNVVTWSSLTGAYAQNG 224
++H G+ S+ + +L+ +Y KC ++ F E NVV W+ + AY
Sbjct: 410 QLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLD 469
Query: 225 CYEEGLLLFKRMMDEGIRPNRVVILNAM-ACVR--KVSEADDVCRVVVDNGLDLDQSLQN 281
+F++M E I PN+ + + C+R + + + ++ L+ + +
Sbjct: 470 DLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCS 529
Query: 282 AAMVMYARCGRMDMARRFFEGILNKDLVSWTSMIEAYAQADLPLEALEVYRQMILRRVLP 341
+ MYA+ G++D A KD+VSWT+MI Y Q + +AL +RQM+ R +
Sbjct: 530 VLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRS 589
Query: 342 DSVTFLGVIRACSSLASFQQARTVHGIIIHCFLGNQLALDTAVVDLYVKCGSLMHARKVF 401
D V + AC+ L + ++ + +H + L A+V LY +CG + + F
Sbjct: 590 DEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAF 649
Query: 402 DRMKQKNVISWSTMISGYGMHGHGREALFLFDQM-KALIKPDHITFVSVLSACSHAGLID 460
++ + + I+W+ ++SG+ G+ EAL +F +M + I ++ TF S + A S +
Sbjct: 650 EQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMK 709
Query: 461 EGWECFNSMLRDFGVAPRPEHYACMVDMLGRAGKLNEAREFIERMPIRPDAGVWGSLLGA 520
+G + ++++ G E ++ M + G +++A + + + + W +++ A
Sbjct: 710 QGKQV-HAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVS-WNAIINA 767
Query: 521 CRIH 524
H
Sbjct: 768 YSKH 771
Score = 159 bits (403), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 118/495 (23%), Positives = 228/495 (46%), Gaps = 19/495 (3%)
Query: 34 PQQQTEFFDPETCISSIKQCQTLQSLKTLHAFTLRSRFYHHHDLFLVTNLVSQYASLGSI 93
P QT + E C+ K +L + LH+ L+ + L L Y G +
Sbjct: 82 PNHQTLKWLLEGCL---KTNGSLDEGRKLHSQILKLGL--DSNGCLSEKLFDFYLFKGDL 136
Query: 94 SHAFSLFSSVSDSCDLFLWNVMIRAFVDNRQFDRSLQLYAQMRELDINPDKFTFPFVLKA 153
AF +F + + +F WN MI+ L+ +M ++ P++ TF VL+A
Sbjct: 137 YGAFKVFDEMPERT-IFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEA 195
Query: 154 C-GYLRDIEFGVKVHKDAVDSGYWSDVFVGNSLIAMYGKCGRVDVCRQLFDEMPERNVVT 212
C G + ++H + G V N LI +Y + G VD+ R++FD + ++ +
Sbjct: 196 CRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSS 255
Query: 213 WSSLTGAYAQNGCYEEGLLLFKRMMDEGIRPNRVVILNAMACVRKVSE---ADDVCRVVV 269
W ++ ++N C E + LF M GI P + ++ +K+ + + +V+
Sbjct: 256 WVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVL 315
Query: 270 DNGLDLDQSLQNAAMVMYARCGRMDMARRFFEGILNKDLVSWTSMIEAYAQADLPLEALE 329
G D + NA + +Y G + A F + +D V++ ++I +Q +A+E
Sbjct: 316 KLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAME 375
Query: 330 VYRQMILRRVLPDSVTFLGVIRACSSLASFQQARTVHGIIIHCFLGNQLALDTAVVDLYV 389
++++M L + PDS T ++ ACS+ + + + +H + ++ A+++LY
Sbjct: 376 LFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYA 435
Query: 390 KCGSLMHARKVFDRMKQKNVISWSTMISGYGMHGHGREALFLFDQMK-ALIKPDHITFVS 448
KC + A F + +NV+ W+ M+ YG+ R + +F QM+ I P+ T+ S
Sbjct: 436 KCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPS 495
Query: 449 VLSACSHAGLIDEGWECFNSMLR-DFGVAPRPEHYAC--MVDMLGRAGKLNEAREFIERM 505
+L C G ++ G + + +++ +F + Y C ++DM + GKL+ A + + R
Sbjct: 496 ILKTCIRLGDLELGEQIHSQIIKTNFQLNA----YVCSVLIDMYAKLGKLDTAWDILIRF 551
Query: 506 PIRPDAGVWGSLLGA 520
+ D W +++
Sbjct: 552 AGK-DVVSWTTMIAG 565
Score = 153 bits (386), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 99/387 (25%), Positives = 184/387 (47%), Gaps = 8/387 (2%)
Query: 140 INPDKFTFPFVLKACGYLR-DIEFGVKVHKDAVDSGYWSDVFVGNSLIAMYGKCGRVDVC 198
I P+ T ++L+ C ++ G K+H + G S+ + L Y G +
Sbjct: 80 IRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGA 139
Query: 199 RQLFDEMPERNVVTWSSLTGAYAQNGCYEEGLLLFKRMMDEGIRPNRVVILNAMACVRKV 258
++FDEMPER + TW+ + A E LF RM+ E + PN + R
Sbjct: 140 FKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGG 199
Query: 259 SEADDVCRVV----VDNGLDLDQSLQNAAMVMYARCGRMDMARRFFEGILNKDLVSWTSM 314
S A DV + + GL + N + +Y+R G +D+ARR F+G+ KD SW +M
Sbjct: 200 SVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAM 259
Query: 315 IEAYAQADLPLEALEVYRQMILRRVLPDSVTFLGVIRACSSLASFQQARTVHGIIIHCFL 374
I ++ + EA+ ++ M + ++P F V+ AC + S + +HG+++
Sbjct: 260 ISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGF 319
Query: 375 GNQLALDTAVVDLYVKCGSLMHARKVFDRMKQKNVISWSTMISGYGMHGHGREALFLFDQ 434
+ + A+V LY G+L+ A +F M Q++ ++++T+I+G G+G +A+ LF +
Sbjct: 320 SSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKR 379
Query: 435 MKA-LIKPDHITFVSVLSACSHAGLIDEGWECFNSMLRDFGVAPRPEHYACMVDMLGRAG 493
M ++PD T S++ ACS G + G + ++ G A + ++++ +
Sbjct: 380 MHLDGLEPDSNTLASLVVACSADGTLFRGQQ-LHAYTTKLGFASNNKIEGALLNLYAKCA 438
Query: 494 KLNEAREFIERMPIRPDAGVWGSLLGA 520
+ A ++ + + +W +L A
Sbjct: 439 DIETALDYFLETEVE-NVVLWNVMLVA 464
>sp|Q9CAY1|PP223_ARATH Putative pentatricopeptide repeat-containing protein At3g11460
OS=Arabidopsis thaliana GN=PCMP-H52 PE=3 SV=1
Length = 623
Score = 461 bits (1187), Expect = e-129, Method: Compositional matrix adjust.
Identities = 242/604 (40%), Positives = 351/604 (58%), Gaps = 23/604 (3%)
Query: 112 WNVMIRAFVDNRQFDRSLQLYAQMRELDINPDKFTFPFVLKACGYLRDIEFGVKVHKDAV 171
WNV +R F S+ LY M +PD F+FPF+LK+C L G ++H
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVT 80
Query: 172 DSGYWSDVFVGNSLIAMYGKCGRVDVCRQLFDEMPERN--VVTWSSLTGAYAQNGCYEEG 229
G ++ FV +LI+MY KCG V R++F+E P+ + V +++L Y N +
Sbjct: 81 KGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDA 140
Query: 230 LLLFKRMMDEGIRPNRVVILNAMACVRKVSEADDVCRVV----VDNGLDLDQSLQNAAMV 285
+F+RM + G+ + V +L + + V E + R + V GLD + ++ N+ +
Sbjct: 141 AYMFRRMKETGVSVDSVTML-GLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFIT 199
Query: 286 MYARCGRMDMARRFFEGILNKDLVSWTSMIEAYAQADLPLEALEVYRQMILRRVLPDSVT 345
MY +CG ++ RR F+ + K L++W ++I Y+Q L + LE+Y QM V PD T
Sbjct: 200 MYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFT 259
Query: 346 FLGVIRACSSLASFQQARTVHGIIIHCFLGNQLALDTAVVDLYVKCGSLMHARKVFDRMK 405
+ V+ +C+ L + + V ++ + + A + +Y +CG+L AR VFD M
Sbjct: 260 LVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMP 319
Query: 406 QKNVISWSTMISGYGMHGHGREALFLFDQM-KALIKPDHITFVSVLSACSHAGLIDEGWE 464
K+++SW+ MI YGMHG G L LFD M K I+PD FV VLSACSH+GL D+G E
Sbjct: 320 VKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLE 379
Query: 465 CFNSMLRDFGVAPRPEHYACMVDMLGRAGKLNEAREFIERMPIRPDAGVWGSLLGACRIH 524
F +M R++ + P PEHY+C+VD+LGRAG+L+EA EFIE MP+ PD VWG+LLGAC+IH
Sbjct: 380 LFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIH 439
Query: 525 SNVELAEMAAKALFDLDAENPGRYVILSNIYASSGKRIEANRIRALMKRRGVKKITGHTV 584
NV++AE+A + + + N G YV++SNIY+ S + RIR +M+ R +K G++
Sbjct: 440 KNVDMAELAFAKVIEFEPNNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKPGYSY 499
Query: 585 IEIKNKVHTFVAGDRSQPQTELTYS----------ELAKLMDRIRREGYTPDL-----NF 629
+E K +VH F+AGDRS QTE + ELA MD R E +
Sbjct: 500 VEHKGRVHLFLAGDRSHEQTEEVHRMLDELETSVMELAGNMDCDRGEEVSSTTREHSERL 559
Query: 630 PFVFGLLNSGPGSAIRIKKNLRVCGDCHTATKFISKVTGREIIVRDAHRFHHFKDGTCSC 689
FG+LNS PG+ I + KNLRVC DCH K +SK+ R+ +VRDA RFH+FKDG CSC
Sbjct: 560 AIAFGILNSIPGTEILVIKNLRVCEDCHVFLKQVSKIVDRQFVVRDASRFHYFKDGVCSC 619
Query: 690 GDYW 693
DYW
Sbjct: 620 KDYW 623
Score = 119 bits (299), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 138/292 (47%), Gaps = 27/292 (9%)
Query: 42 DPETCISSIKQCQTLQSL---KTLHAFTLRSRFYHHHDLFLVTNLVSQYASLGSISHAFS 98
D T + + C + L ++LH ++ ++ ++ + ++ Y GS+
Sbjct: 155 DSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGL--DSEVAVLNSFITMYMKCGSVEAGRR 212
Query: 99 LFSSVSDSCDLFLWNVMIRAFVDNRQFDRSLQLYAQMRELDINPDKFTFPFVLKACGYLR 158
LF + L WN +I + N L+LY QM+ + PD FT VL +C +L
Sbjct: 213 LFDEMPVK-GLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLG 271
Query: 159 DIEFGVKVHKDAVDSGYWSDVFVGNSLIAMYGKCGRVDVCRQLFDEMPERNVVTWSSLTG 218
+ G +V K +G+ +VFV N+ I+MY +CG + R +FD MP +++V+W+++ G
Sbjct: 272 AKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIG 331
Query: 219 AYAQNGCYEEGLLLFKRMMDEGIRPNRVVILNAMACVRKVSEADDVCRVVVDNGLDLDQS 278
Y +G E GL+LF M+ GIRP+ V + ++ + D GL+L ++
Sbjct: 332 CYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSG--------LTDKGLELFRA 383
Query: 279 LQNAAMV------------MYARCGRMDMARRFFEGI-LNKDLVSWTSMIEA 317
++ + + R GR+D A F E + + D W +++ A
Sbjct: 384 MKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGA 435
>sp|Q9LN01|PPR21_ARATH Pentatricopeptide repeat-containing protein At1g08070
OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1
Length = 741
Score = 461 bits (1186), Expect = e-129, Method: Compositional matrix adjust.
Identities = 253/732 (34%), Positives = 401/732 (54%), Gaps = 64/732 (8%)
Query: 23 QQWRLFFSASSPQQQTEFFDPETCISSIKQCQTLQSLKTLHAFTLRSRFYHHHDLFLVTN 82
+ F SS + +S + C+TLQSL+ +HA ++ H+ + ++
Sbjct: 13 SSYPFHFLPSSSDPPYDSIRNHPSLSLLHNCKTLQSLRIIHAQMIKIGL--HNTNYALSK 70
Query: 83 LVS---QYASLGSISHAFSLFSSVSDSCDLFLWNVMIRAFVDNRQFDRSLQLYAQMRELD 139
L+ + +A S+F ++ + +L +WN M R + +L+LY M L
Sbjct: 71 LIEFCILSPHFEGLPYAISVFKTIQEP-NLLIWNTMFRGHALSSDPVSALKLYVCMISLG 129
Query: 140 INPDKFTFPFVLKACGYLRDIEFGVKVHKDAVDSGYWSDVFVGNSLIAMYGKCGR----- 194
+ P+ +TFPFVLK+C + + G ++H + G D++V SLI+MY + GR
Sbjct: 130 LLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAH 189
Query: 195 --------------------------VDVCRQLFDEMPERNVVTWSSLTGAYAQNGCYEE 228
++ ++LFDE+P ++VV+W+++ YA+ G Y+E
Sbjct: 190 KVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKE 249
Query: 229 GLLLFKRMMDEGIRPNR---VVILNAMACVRKVSEADDVCRVVVDNGLDLDQSLQNAAMV 285
L LFK MM +RP+ V +++A A + V + D+G + + NA +
Sbjct: 250 ALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALID 309
Query: 286 MYARCGRMDMARRFFEGILNKDLVSWTSMIEAYAQADLPLEALEVYRQMILRRVLPDSVT 345
+Y++CG ++ A FE + KD++SW ++I Y +L EAL ++++M+ P+ VT
Sbjct: 310 LYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVT 369
Query: 346 FLGVIRACSSLASFQQARTVHGIIIHCFLG--NQLALDTAVVDLYVKCGSLMHARKVFDR 403
L ++ AC+ L + R +H I G N +L T+++D+Y KCG + A +VF+
Sbjct: 370 MLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNS 429
Query: 404 MKQKNVISWSTMISGYGMHGHGREALFLFDQMKAL-IKPDHITFVSVLSACSHAGLIDEG 462
+ K++ SW+ MI G+ MHG + LF +M+ + I+PD ITFV +LSACSH+G++D G
Sbjct: 430 ILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLG 489
Query: 463 WECFNSMLRDFGVAPRPEHYACMVDMLGRAGKLNEAREFIERMPIRPDAGVWGSLLGACR 522
F +M +D+ + P+ EHY CM+D+LG +G EA E I M + PD +W SLL AC+
Sbjct: 490 RHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACK 549
Query: 523 IHSNVELAEMAAKALFDLDAENPGRYVILSNIYASSGKRIEANRIRALMKRRGVKKITGH 582
+H NVEL E A+ L ++ ENPG YV+LSNIYAS+G+ E + RAL+ +G+KK+ G
Sbjct: 550 MHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGC 609
Query: 583 TVIEIKNKVHTFVAGDRSQPQTELTYSELAKLMDRIRREGYTPDLN-------------- 628
+ IEI + VH F+ GD+ P+ Y L ++ + + G+ PD +
Sbjct: 610 SSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGA 669
Query: 629 -------FPFVFGLLNSGPGSAIRIKKNLRVCGDCHTATKFISKVTGREIIVRDAHRFHH 681
FGL+++ PG+ + I KNLRVC +CH ATK ISK+ REII RD RFHH
Sbjct: 670 LRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHH 729
Query: 682 FKDGTCSCGDYW 693
F+DG CSC DYW
Sbjct: 730 FRDGVCSCNDYW 741
>sp|Q9LIQ7|PP252_ARATH Pentatricopeptide repeat-containing protein At3g24000,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H87 PE=2
SV=1
Length = 633
Score = 457 bits (1176), Expect = e-127, Method: Compositional matrix adjust.
Identities = 234/585 (40%), Positives = 349/585 (59%), Gaps = 38/585 (6%)
Query: 140 INPDKFTFPFVLKACGYLRDIEFGVKVHKDAVDSGYWSDVFVGNSLIAMYGKCGRVDVCR 199
I D+ + +LK C + + G VH + S + D+ +GN+L+ MY KCG ++ R
Sbjct: 56 IPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEAR 115
Query: 200 QLFDEMPERNVVTWSSLTGAYAQNGCYEEGLLLFKRMMDEGIRPNRVV---ILNAMACVR 256
++F++MP+R+ VTW++L Y+Q+ + LL F +M+ G PN ++ A A R
Sbjct: 116 KVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAER 175
Query: 257 KVSEADDVCRVVVDNGLDLDQSLQNAAMVMYARCGRMDMARRFFEGILNKDLVSWTSMIE 316
+ + V G D + + +A + +Y R G MD A+ F+ + +++ VSW ++I
Sbjct: 176 RGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIA 235
Query: 317 AYAQADLPLEALEVYRQMILRRVLPDSVTFLGVIRACSSLASFQQARTVHGIIIH----- 371
+A+ +ALE+++ M+ P ++ + ACSS +Q + VH +I
Sbjct: 236 GHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKL 295
Query: 372 -CFLGNQLALDTAVVDLYVKCGSLMHARKVFDRMKQKNVISWSTMISGYGMHGHGREALF 430
F GN L +D+Y K GS+ ARK+FDR+ +++V+SW+++++ Y HG G+EA++
Sbjct: 296 VAFAGNTL------LDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVW 349
Query: 431 LFDQMKAL-IKPDHITFVSVLSACSHAGLIDEGWECFNSMLRDFGVAPRPEHYACMVDML 489
F++M+ + I+P+ I+F+SVL+ACSH+GL+DEGW + M +D G+ P HY +VD+L
Sbjct: 350 WFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKD-GIVPEAWHYVTVVDLL 408
Query: 490 GRAGKLNEAREFIERMPIRPDAGVWGSLLGACRIHSNVELAEMAAKALFDLDAENPGRYV 549
GRAG LN A FIE MPI P A +W +LL ACR+H N EL AA+ +F+LD ++PG +V
Sbjct: 409 GRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHV 468
Query: 550 ILSNIYASSGKRIEANRIRALMKRRGVKKITGHTVIEIKNKVHTFVAGDRSQPQTELTYS 609
IL NIYAS G+ +A R+R MK GVKK + +EI+N +H FVA D PQ E
Sbjct: 469 ILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIAR 528
Query: 610 ELAKLMDRIRREGYTPDLNFPFV---------------------FGLLNSGPGSAIRIKK 648
+ +++ +I+ GY PD + V F LLN+ PGS I IKK
Sbjct: 529 KWEEVLAKIKELGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKK 588
Query: 649 NLRVCGDCHTATKFISKVTGREIIVRDAHRFHHFKDGTCSCGDYW 693
N+RVCGDCHTA K SKV GREIIVRD +RFHHFKDG CSC DYW
Sbjct: 589 NIRVCGDCHTAIKLASKVVGREIIVRDTNRFHHFKDGNCSCKDYW 633
Score = 101 bits (251), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 124/260 (47%), Gaps = 7/260 (2%)
Query: 62 LHAFTLRSRFYHHHDLFLVTNLVSQYASLGSISHAFSLFSSVSDSCDLFLWNVMIRAFVD 121
LH F ++ F ++ + + L+ Y G + A +F ++ D+ WN +I
Sbjct: 183 LHGFCVKCGF--DSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVS-WNALIAGHAR 239
Query: 122 NRQFDRSLQLYAQMRELDINPDKFTFPFVLKACGYLRDIEFGVKVHKDAVDSGYWSDVFV 181
+++L+L+ M P F++ + AC +E G VH + SG F
Sbjct: 240 RSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFA 299
Query: 182 GNSLIAMYGKCGRVDVCRQLFDEMPERNVVTWSSLTGAYAQNGCYEEGLLLFKRMMDEGI 241
GN+L+ MY K G + R++FD + +R+VV+W+SL AYAQ+G +E + F+ M GI
Sbjct: 300 GNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGI 359
Query: 242 RPNRVVILNAM-ACVRK--VSEADDVCRVVVDNGLDLDQSLQNAAMVMYARCGRMDMARR 298
RPN + L+ + AC + E ++ +G+ + + + R G ++ A R
Sbjct: 360 RPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALR 419
Query: 299 FFEGI-LNKDLVSWTSMIEA 317
F E + + W +++ A
Sbjct: 420 FIEEMPIEPTAAIWKALLNA 439
>sp|Q9LFL5|PP390_ARATH Pentatricopeptide repeat-containing protein At5g16860
OS=Arabidopsis thaliana GN=PCMP-H92 PE=2 SV=1
Length = 850
Score = 451 bits (1159), Expect = e-125, Method: Compositional matrix adjust.
Identities = 256/723 (35%), Positives = 394/723 (54%), Gaps = 87/723 (12%)
Query: 51 KQCQTLQSLK---TLHAFTLRSRFYHHHDLFLVTNLVSQYASLGSISHAFSLFSSVSDSC 107
K C + S++ + HA +L + F ++F+ LV+ Y+ S+S A +F +S
Sbjct: 135 KACGEISSVRCGESAHALSLVTGFIS--NVFVGNALVAMYSRCRSLSDARKVFDEMS-VW 191
Query: 108 DLFLWNVMIRAFVDNRQFDRSLQLYAQM-RELDINPDKFTFPFVLKACGYLRDIEFGVKV 166
D+ WN +I ++ + +L+++++M E PD T VL C L G ++
Sbjct: 192 DVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQL 251
Query: 167 HKDAVDSGYWSDVFVGNSLIAMYGKCGRVDVCRQLFDEMPERNVVTWSSLTGAYAQNGCY 226
H AV S ++FVGN L+ MY KCG +D +F M ++VV+W+++ Y+Q G +
Sbjct: 252 HCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRF 311
Query: 227 EEGLLLFKRMMDE-----------------------------------GIRPNRVV---I 248
E+ + LF++M +E GI+PN V +
Sbjct: 312 EDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISV 371
Query: 249 LNAMACVRKVSEADDVCRVVVDNGLDL-------DQSLQNAAMVMYARCGRMDMARRFFE 301
L+ A V + ++ + +DL + + N + MYA+C ++D AR F+
Sbjct: 372 LSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFD 431
Query: 302 GILNK--DLVSWTSMIEAYAQADLPLEALEVYRQMILR--RVLPDSVTFLGVIRACSSLA 357
+ K D+V+WT MI Y+Q +ALE+ +M + P++ T + AC+SLA
Sbjct: 432 SLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLA 491
Query: 358 SFQQARTVHGIIIHCFLGNQ-----LALDTAVVDLYVKCGSLMHARKVFDRMKQKNVISW 412
+ + + +H L NQ L + ++D+Y KCGS+ AR VFD M KN ++W
Sbjct: 492 ALRIGKQIHAYA----LRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTW 547
Query: 413 STMISGYGMHGHGREALFLFDQMKAL-IKPDHITFVSVLSACSHAGLIDEGWECFNSMLR 471
+++++GYGMHG+G EAL +FD+M+ + K D +T + VL ACSH+G+ID+G E FN M
Sbjct: 548 TSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKT 607
Query: 472 DFGVAPRPEHYACMVDMLGRAGKLNEAREFIERMPIRPDAGVWGSLLGACRIHSNVELAE 531
FGV+P PEHYAC+VD+LGRAG+LN A IE MP+ P VW + L CRIH VEL E
Sbjct: 608 VFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGE 667
Query: 532 MAAKALFDLDAENPGRYVILSNIYASSGKRIEANRIRALMKRRGVKKITGHTVIEIKNKV 591
AA+ + +L + + G Y +LSN+YA++G+ + RIR+LM+ +GVKK G + +E
Sbjct: 668 YAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGT 727
Query: 592 HTFVAGDRSQPQTELTYSELAKLMDRIRREGYTPDLNF---------------------P 630
TF GD++ P + Y L M RI+ GY P+ F
Sbjct: 728 TTFFVGDKTHPHAKEIYQVLLDHMQRIKDIGYVPETGFALHDVDDEEKDDLLFEHSEKLA 787
Query: 631 FVFGLLNSGPGSAIRIKKNLRVCGDCHTATKFISKVTGREIIVRDAHRFHHFKDGTCSCG 690
+G+L + G+AIRI KNLRVCGDCHTA ++S++ +II+RD+ RFHHFK+G+CSC
Sbjct: 788 LAYGILTTPQGAAIRITKNLRVCGDCHTAFTYMSRIIDHDIILRDSSRFHHFKNGSCSCK 847
Query: 691 DYW 693
YW
Sbjct: 848 GYW 850
Score = 249 bits (635), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 166/560 (29%), Positives = 269/560 (48%), Gaps = 75/560 (13%)
Query: 28 FFSASSPQQQTEFFDPETCISSIKQCQTLQSLKTLHAFTLRSRFYHHHDLFLVTNLVSQY 87
FS S+P+ F I +C+T+ +K +H L L L ++L+S Y
Sbjct: 22 LFSTSAPEITPPF---------IHKCKTISQVKLIHQKLLSFGIL---TLNLTSHLISTY 69
Query: 88 ASLGSISHAFSLFSSVSDS-CDLFLWNVMIRAFVDNRQFDRSLQLYAQMRELDINPDKFT 146
S+G +SHA SL S ++ WN +IR++ DN ++ L L+ M L PD +T
Sbjct: 70 ISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYT 129
Query: 147 FPFVLKACGYLRDIEFGVKVHKDAVDSGYWSDVFVGNSLIAMYGKCGRVDVCRQLFDEMP 206
FPFV KACG + + G H ++ +G+ S+VFVGN+L+AMY +C + R++FDEM
Sbjct: 130 FPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMS 189
Query: 207 ERNVVTWSSLTGAYAQNGCYEEGLLLFKRMMDE-GIRPNRVVILNAM---ACVRKVSEAD 262
+VV+W+S+ +YA+ G + L +F RM +E G RP+ + ++N + A + S
Sbjct: 190 VWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGK 249
Query: 263 DVCRVVVDNGLDLDQSLQNAAMVMYARCGRMDMARRFFEGILNKDLVSWTSM-------- 314
+ V + + + + N + MYA+CG MD A F + KD+VSW +M
Sbjct: 250 QLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIG 309
Query: 315 ---------------------------IEAYAQADLPLEALEVYRQMILRRVLPDSVTFL 347
I YAQ L EAL V RQM+ + P+ VT +
Sbjct: 310 RFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLI 369
Query: 348 GVIRACSSLASFQQARTVHGIIIHCFL------------GNQLALDTAVVDLYVKCGSLM 395
V+ C+S+ + +HG IHC+ G++ + ++D+Y KC +
Sbjct: 370 SVLSGCASVGAL-----MHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVD 424
Query: 396 HARKVFDRM--KQKNVISWSTMISGYGMHGHGREALFLFDQM---KALIKPDHITFVSVL 450
AR +FD + K+++V++W+ MI GY HG +AL L +M +P+ T L
Sbjct: 425 TARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCAL 484
Query: 451 SACSHAGLIDEGWECFNSMLRDFGVAPRPEHYACMVDMLGRAGKLNEAREFIERMPIRPD 510
AC+ + G + LR+ A C++DM + G +++AR + M + +
Sbjct: 485 VACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNE 544
Query: 511 AGVWGSLLGACRIHSNVELA 530
W SL+ +H E A
Sbjct: 545 V-TWTSLMTGYGMHGYGEEA 563
>sp|O23337|PP311_ARATH Pentatricopeptide repeat-containing protein At4g14820
OS=Arabidopsis thaliana GN=PCMP-H3 PE=2 SV=1
Length = 722
Score = 445 bits (1144), Expect = e-124, Method: Compositional matrix adjust.
Identities = 251/711 (35%), Positives = 387/711 (54%), Gaps = 64/711 (9%)
Query: 45 TCISSIKQCQTLQSLKTLHAFTLRSRFYHHHDLFLVTNLVSQYASLGSISHAFSLFSSVS 104
T + + C++L +K LHA LR+ H + FL VS + ++S+A ++FSS+
Sbjct: 14 TILEKLSFCKSLNHIKQLHAHILRTVINHKLNSFLFNLSVSSSSI--NLSYALNVFSSIP 71
Query: 105 DSCDLFLWNVMIRAFVDNRQFDRSLQLYAQMRELDINPDKFTFPFVLKACGYLRDIEFGV 164
+ ++N +R + + ++ Y ++R + D+F+F +LKA + + G+
Sbjct: 72 SPPESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGM 131
Query: 165 KVHKDAVDSGYWSDVFVGNSLIAMYGKCGRVDVCRQLFDEMPERNVVTWSSLTGAYAQNG 224
++H A D FV + MY CGR++ R +FDEM R+VVTW+++ Y + G
Sbjct: 132 ELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFG 191
Query: 225 CYEEGLLLFKRMMDEGIRPNRVVILNAM-ACVR--KVSEADDVCRVVVDNGLDLDQSLQN 281
+E LF+ M D + P+ +++ N + AC R + + +++N + +D L
Sbjct: 192 LVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLT 251
Query: 282 AAMVMYARCGRMDMARRFFE--------------------GILN-----------KDLVS 310
A + MYA G MDMAR FF G L+ KDLV
Sbjct: 252 ALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVC 311
Query: 311 WTSMIEAYAQADLPLEALEVYRQMILRRVLPDSVTFLGVIRACSSLASFQQARTVHGIII 370
WT+MI AY ++D P EAL V+ +M + PD V+ VI AC++L +A+ VH I
Sbjct: 312 WTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIH 371
Query: 371 HCFLGNQLALDTAVVDLYVKCGSLMHARKVFDRMKQKNVISWSTMISGYGMHGHGREALF 430
L ++L+++ A++++Y KCG L R VF++M ++NV+SWS+MI+ MHG +AL
Sbjct: 372 VNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALS 431
Query: 431 LFDQMKAL-IKPDHITFVSVLSACSHAGLIDEGWECFNSMLRDFGVAPRPEHYACMVDML 489
LF +MK ++P+ +TFV VL CSH+GL++EG + F SM ++ + P+ EHY CMVD+
Sbjct: 432 LFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLF 491
Query: 490 GRAGKLNEAREFIERMPIRPDAGVWGSLLGACRIHSNVELAEMAAKALFDLDAENPGRYV 549
GRA L EA E IE MP+ + +WGSL+ ACRIH +EL + AAK + +L+ ++ G V
Sbjct: 492 GRANLLREALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKRILELEPDHDGALV 551
Query: 550 ILSNIYASSGKRIEANRIRALMKRRGVKKITGHTVIEIKNKVHTFVAGDRSQPQTELTYS 609
++SNIYA + + IR +M+ + V K G + I+ K H F+ GD+ Q+ Y+
Sbjct: 552 LMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRIDQNGKSHEFLIGDKRHKQSNEIYA 611
Query: 610 ELAKLMDRIRREGYTPDLNFPFV---------------------FGLLNSGPGS------ 642
+L +++ +++ GY PD V FGL+N
Sbjct: 612 KLDEVVSKLKLAGYVPDCGSVLVDVEEEEKKDLVLWHSEKLALCFGLMNEEKEEEKDSCG 671
Query: 643 AIRIKKNLRVCGDCHTATKFISKVTGREIIVRDAHRFHHFKDGTCSCGDYW 693
IRI KNLRVC DCH K +SKV REIIVRD RFH +K+G CSC DYW
Sbjct: 672 VIRIVKNLRVCEDCHLFFKLVSKVYEREIIVRDRTRFHCYKNGLCSCRDYW 722
>sp|Q9M1V3|PP296_ARATH Pentatricopeptide repeat-containing protein At3g63370
OS=Arabidopsis thaliana GN=PCMP-H83 PE=2 SV=2
Length = 960
Score = 444 bits (1143), Expect = e-123, Method: Compositional matrix adjust.
Identities = 239/678 (35%), Positives = 396/678 (58%), Gaps = 32/678 (4%)
Query: 45 TCISSIKQCQTLQSLK---TLHAFTLRSRFYHHHDLFLVTNLVSQYASLGSISHAFSLFS 101
T +S++ C K +HA L+S H +L++ L++ Y G + A +
Sbjct: 286 TIVSALTACDGFSYAKLGKEIHASVLKSS-THSSELYVCNALIAMYTRCGKMPQAERILR 344
Query: 102 SVSDSCDLFLWNVMIRAFVDNRQFDRSLQLYAQMRELDINPDKFTFPFVLKACGYLRDIE 161
++++ D+ WN +I+ +V N + +L+ ++ M D+ + ++ A G L ++
Sbjct: 345 QMNNA-DVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLL 403
Query: 162 FGVKVHKDAVDSGYWSDVFVGNSLIAMYGKCGRVDVCRQLFDEMPERNVVTWSSLTGAYA 221
G+++H + G+ S++ VGN+LI MY KC + F M ++++++W+++ YA
Sbjct: 404 AGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYA 463
Query: 222 QNGCYEEGLLLFKRMMDEGIRPNRVV---ILNAMACVRKVSEADDVCRVVVDNGLDLDQS 278
QN C+ E L LF+ + + + + ++ IL A + ++ + ++ ++ GL LD
Sbjct: 464 QNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGL-LDTV 522
Query: 279 LQNAAMVMYARCGRMDMARRFFEGILNKDLVSWTSMIEAYAQADLPLEALEVYRQMILRR 338
+QN + +Y +C M A R FE I KD+VSWTSMI + A EA+E++R+M+
Sbjct: 523 IQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETG 582
Query: 339 VLPDSVTFLGVIRACSSLASFQQARTVHGIIIHCFLGNQLALDTAVVDLYVKCGSLMHAR 398
+ DSV L ++ A +SL++ + R +H ++ + ++ AVVD+Y CG L A+
Sbjct: 583 LSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAK 642
Query: 399 KVFDRMKQKNVISWSTMISGYGMHGHGREALFLFDQMK-ALIKPDHITFVSVLSACSHAG 457
VFDR+++K ++ +++MI+ YGMHG G+ A+ LFD+M+ + PDHI+F+++L ACSHAG
Sbjct: 643 AVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAG 702
Query: 458 LIDEGWECFNSMLRDFGVAPRPEHYACMVDMLGRAGKLNEAREFIERMPIRPDAGVWGSL 517
L+DEG M ++ + P PEHY C+VDMLGRA + EA EF++ M P A VW +L
Sbjct: 703 LLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCAL 762
Query: 518 LGACRIHSNVELAEMAAKALFDLDAENPGRYVILSNIYASSGKRIEANRIRALMKRRGVK 577
L ACR HS E+ E+AA+ L +L+ +NPG V++SN++A G+ + ++RA MK G++
Sbjct: 763 LAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGME 822
Query: 578 KITGHTVIEIKNKVHTFVAGDRSQPQTELTYSELAKLMDRIRRE-GYTPDLNF------- 629
K G + IE+ KVH F A D+S P+++ Y +L+++ ++ RE GY D F
Sbjct: 823 KHPGCSWIEMDGKVHKFTARDKSHPESKEIYEKLSEVTRKLEREVGYVADTKFVLHNVDE 882
Query: 630 --------------PFVFGLLNSGPGSAIRIKKNLRVCGDCHTATKFISKVTGREIIVRD 675
+GLL + + +RI KNLRVC DCHT K +SK+ R+I++RD
Sbjct: 883 GEKVQMLHGHSERIAIAYGLLRTPDRACLRITKNLRVCRDCHTFCKLVSKLFRRDIVMRD 942
Query: 676 AHRFHHFKDGTCSCGDYW 693
A+RFHHF+ G CSCGD W
Sbjct: 943 ANRFHHFESGLCSCGDSW 960
Score = 207 bits (527), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 159/548 (29%), Positives = 275/548 (50%), Gaps = 35/548 (6%)
Query: 50 IKQCQTLQSLKT---LHAFTLRSRFYHHHDLFLVTNLVSQYASLGSISHAFSLFSSVSDS 106
+K C L+ +++ LH+ ++ +H F+V LVS YA +S A LF +
Sbjct: 189 LKACAKLRDIRSGSELHSLLVK--LGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEK 246
Query: 107 CDLFLWNVMIRAFVDNRQFDRSLQLYAQMRELDINPDKFTFPFVLKACGYLRDIEFGVKV 166
D LWN ++ ++ + + +L+L+ +M P+ +T L AC + G ++
Sbjct: 247 GDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEI 306
Query: 167 HKDAVDSG-YWSDVFVGNSLIAMYGKCGRVDVCRQLFDEMPERNVVTWSSLTGAYAQNGC 225
H + S + S+++V N+LIAMY +CG++ ++ +M +VVTW+SL Y QN
Sbjct: 307 HASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLM 366
Query: 226 YEEGLLLFKRMMDEGIRPNRVVILNAMACVRKVSE---ADDVCRVVVDNGLDLDQSLQNA 282
Y+E L F M+ G + + V + + +A ++S ++ V+ +G D + + N
Sbjct: 367 YKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNT 426
Query: 283 AMVMYARCGRMDMARRFFEGILNKDLVSWTSMIEAYAQADLPLEALEVYRQMILRRVLPD 342
+ MY++C R F + +KDL+SWT++I YAQ D +EALE++R + +R+ D
Sbjct: 427 LIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEID 486
Query: 343 SVTFLGVIRACSSLASFQQARTVHGIIIHCFLGNQLALDTAV----VDLYVKCGSLMHAR 398
+ ++RA S L S + IHC + + LDT + VD+Y KC ++ +A
Sbjct: 487 EMILGSILRASSVLKSMLIVKE-----IHCHILRKGLLDTVIQNELVDVYGKCRNMGYAT 541
Query: 399 KVFDRMKQKNVISWSTMISGYGMHGHGREALFLFDQM-KALIKPDHITFVSVLSACSHAG 457
+VF+ +K K+V+SW++MIS ++G+ EA+ LF +M + + D + + +LSA +
Sbjct: 542 RVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLS 601
Query: 458 LIDEGWECFNSMLRDFGVAPRPEHYACMVDMLGRAGKLNEAREFIERMPIRPDAGVWGSL 517
+++G E +LR G +VDM G L A+ +R+ R + S+
Sbjct: 602 ALNKGREIHCYLLRK-GFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIE-RKGLLQYTSM 659
Query: 518 LGACRIHSNVELAEMAAKALFD-LDAEN--PGRYVILSNIYASSGKRIEANRIRALMKRR 574
+ A +H AA LFD + EN P L+ +YA S + L + R
Sbjct: 660 INAYGMHG----CGKAAVELFDKMRHENVSPDHISFLALLYACSHAGL-------LDEGR 708
Query: 575 GVKKITGH 582
G KI H
Sbjct: 709 GFLKIMEH 716
Score = 197 bits (501), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 127/383 (33%), Positives = 192/383 (50%), Gaps = 7/383 (1%)
Query: 78 FLVTNLVSQYASLGSISHAFSLFSSVSDSCDLFLWNVMIRAFVDNRQFDRSLQLYAQMRE 137
FL LV Y GS+ A +F + D F WN MI A+V N + +L LY MR
Sbjct: 117 FLAGKLVFMYGKCGSLDDAEKVFDEMPDR-TAFAWNTMIGAYVSNGEPASALALYWNMRV 175
Query: 138 LDINPDKFTFPFVLKACGYLRDIEFGVKVHKDAVDSGYWSDVFVGNSLIAMYGKCGRVDV 197
+ +FP +LKAC LRDI G ++H V GY S F+ N+L++MY K +
Sbjct: 176 EGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSA 235
Query: 198 CRQLFDEMPER-NVVTWSSLTGAYAQNGCYEEGLLLFKRMMDEGIRPNRVVILNAMACVR 256
R+LFD E+ + V W+S+ +Y+ +G E L LF+ M G PN I++A+
Sbjct: 236 ARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACD 295
Query: 257 KVSEA----DDVCRVVVDNGLDLDQSLQNAAMVMYARCGRMDMARRFFEGILNKDLVSWT 312
S A + V+ + + + NA + MY RCG+M A R + N D+V+W
Sbjct: 296 GFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWN 355
Query: 313 SMIEAYAQADLPLEALEVYRQMILRRVLPDSVTFLGVIRACSSLASFQQARTVHGIIIHC 372
S+I+ Y Q + EALE + MI D V+ +I A L++ +H +I
Sbjct: 356 SLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKH 415
Query: 373 FLGNQLALDTAVVDLYVKCGSLMHARKVFDRMKQKNVISWSTMISGYGMHGHGREALFLF 432
+ L + ++D+Y KC + + F RM K++ISW+T+I+GY + EAL LF
Sbjct: 416 GWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELF 475
Query: 433 -DQMKALIKPDHITFVSVLSACS 454
D K ++ D + S+L A S
Sbjct: 476 RDVAKKRMEIDEMILGSILRASS 498
Score = 162 bits (410), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 95/337 (28%), Positives = 172/337 (51%), Gaps = 18/337 (5%)
Query: 146 TFPFVLKACGYLRDIEFGVKVHKDAVDSGYWSDV-FVGNSLIAMYGKCGRVDVCRQLFDE 204
F +VL+ CG R + G ++H + ++ F+ L+ MYGKCG +D ++FDE
Sbjct: 82 AFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDE 141
Query: 205 MPERNVVTWSSLTGAYAQNGCYEEGLLLFKRMMDEGIR---PNRVVILNAMACVRKVSEA 261
MP+R W+++ GAY NG L L+ M EG+ + +L A A +R +
Sbjct: 142 MPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSG 201
Query: 262 DDVCRVVVDNGLDLDQSLQNAAMVMYARCGRMDMARRFFEGILNK-DLVSWTSMIEAYAQ 320
++ ++V G + NA + MYA+ + ARR F+G K D V W S++ +Y+
Sbjct: 202 SELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYST 261
Query: 321 ADLPLEALEVYRQMILRRVLPDSVTFLGVIRACSSLASFQQARTVHGIIIHCFL-GNQLA 379
+ LE LE++R+M + P+S T + + AC + + + +H ++ ++L
Sbjct: 262 SGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELY 321
Query: 380 LDTAVVDLYVKCGSLMHARKVFDRMKQKNVISWSTMISGYGMHGHGREAL-FLFDQMKAL 438
+ A++ +Y +CG + A ++ +M +V++W+++I GY + +EAL F D + A
Sbjct: 322 VCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAG 381
Query: 439 IKPDHITFVSVLSACS-----------HAGLIDEGWE 464
K D ++ S+++A HA +I GW+
Sbjct: 382 HKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWD 418
>sp|Q9STF3|PP265_ARATH Pentatricopeptide repeat-containing protein At3g46790,
chloroplastic OS=Arabidopsis thaliana GN=CRR2 PE=2 SV=1
Length = 657
Score = 442 bits (1136), Expect = e-123, Method: Compositional matrix adjust.
Identities = 238/629 (37%), Positives = 368/629 (58%), Gaps = 41/629 (6%)
Query: 106 SCDLFLWNVMIR----AFVDNRQFDRSL----QLYAQMREL--DINPDKFTFPFVLKACG 155
SC + L N I A + N Q +SL +L +R L + +P + T+ ++ CG
Sbjct: 29 SCSVALNNPSISSGAGAKISNNQLIQSLCKEGKLKQAIRVLSQESSPSQQTYELLILCCG 88
Query: 156 YLRDIEFGVKVHKDAVDSGYWSDVFVGNSLIAMYGKCGRVDVCRQLFDEMPERNVVTWSS 215
+ + ++VH+ +D+G D F+ LI MY G VD R++FD+ +R + W++
Sbjct: 89 HRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNA 148
Query: 216 LTGAYAQNGCYEEGLLLFKRMMDEGIRPNRVVILNAM-ACV------RKVSEADDVCRVV 268
L A G EE L L+ +M G+ +R + ACV + + ++ +
Sbjct: 149 LFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHL 208
Query: 269 VDNGLDLDQSLQNAAMVMYARCGRMDMARRFFEGILNKDLVSWTSMIEAYAQADLPLEAL 328
G + + MYAR G +D A F G+ +++VSW++MI YA+ EAL
Sbjct: 209 TRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEAL 268
Query: 329 EVYRQMI--LRRVLPDSVTFLGVIRACSSLASFQQARTVHGIIIHCFLGNQLALDTAVVD 386
+R+M+ + P+SVT + V++AC+SLA+ +Q + +HG I+ L + L + +A+V
Sbjct: 269 RTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVT 328
Query: 387 LYVKCGSLMHARKVFDRMKQKNVISWSTMISGYGMHGHGREALFLFDQMKAL-IKPDHIT 445
+Y +CG L ++VFDRM ++V+SW+++IS YG+HG+G++A+ +F++M A P +T
Sbjct: 329 MYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVT 388
Query: 446 FVSVLSACSHAGLIDEGWECFNSMLRDFGVAPRPEHYACMVDMLGRAGKLNEAREFIERM 505
FVSVL ACSH GL++EG F +M RD G+ P+ EHYACMVD+LGRA +L+EA + ++ M
Sbjct: 389 FVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDM 448
Query: 506 PIRPDAGVWGSLLGACRIHSNVELAEMAAKALFDLDAENPGRYVILSNIYASSGKRIEAN 565
P VWGSLLG+CRIH NVELAE A++ LF L+ +N G YV+L++IYA + E
Sbjct: 449 RTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVK 508
Query: 566 RIRALMKRRGVKKITGHTVIEIKNKVHTFVAGDRSQPQTELTYSELAKLMDRIRREGYTP 625
R++ L++ RG++K+ G +E++ K+++FV+ D P E ++ L KL + ++ +GY P
Sbjct: 509 RVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSVDEFNPLMEQIHAFLVKLAEDMKEKGYIP 568
Query: 626 DL---------------------NFPFVFGLLNSGPGSAIRIKKNLRVCGDCHTATKFIS 664
FGL+N+ G IRI KNLR+C DCH TKFIS
Sbjct: 569 QTKGVLYELETEEKERIVLGHSEKLALAFGLINTSKGEPIRITKNLRLCEDCHLFTKFIS 628
Query: 665 KVTGREIIVRDAHRFHHFKDGTCSCGDYW 693
K +EI+VRD +RFH FK+G CSCGDYW
Sbjct: 629 KFMEKEILVRDVNRFHRFKNGVCSCGDYW 657
Score = 181 bits (459), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 132/477 (27%), Positives = 225/477 (47%), Gaps = 32/477 (6%)
Query: 2 ARVVVTQMVMQQKLTKFCHLRQQWRLFFSASSPQQQTEFFDPETCISSIKQCQTLQSLKT 61
A++ Q++ Q L K L+Q R+ SSP QQT E I +L
Sbjct: 45 AKISNNQLI--QSLCKEGKLKQAIRVLSQESSPSQQTY----ELLILCCGHRSSLSDALR 98
Query: 62 LHAFTLRSRFYHHHDLFLVTNLVSQYASLGSISHAFSLFSSVSDSCDLFLWNVMIRAFVD 121
+H L + D FL T L+ Y+ LGS+ +A +F +++WN + RA
Sbjct: 99 VHRHILDNG--SDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKR-TIYVWNALFRALTL 155
Query: 122 NRQFDRSLQLYAQMRELDINPDKFTFPFVLKAC----GYLRDIEFGVKVHKDAVDSGYWS 177
+ L LY +M + + D+FT+ +VLKAC + + G ++H GY S
Sbjct: 156 AGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSS 215
Query: 178 DVFVGNSLIAMYGKCGRVDVCRQLFDEMPERNVVTWSSLTGAYAQNGCYEEGLLLFKRMM 237
V++ +L+ MY + G VD +F MP RNVV+WS++ YA+NG E L F+ MM
Sbjct: 216 HVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMM 275
Query: 238 DE--GIRPNRVV---ILNAMACVRKVSEADDVCRVVVDNGLDLDQSLQNAAMVMYARCGR 292
E PN V +L A A + + + + ++ GLD + +A + MY RCG+
Sbjct: 276 RETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGK 335
Query: 293 MDMARRFFEGILNKDLVSWTSMIEAYAQADLPLEALEVYRQMILRRVLPDSVTFLGVIRA 352
+++ +R F+ + ++D+VSW S+I +Y +A++++ +M+ P VTF+ V+ A
Sbjct: 336 LEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGA 395
Query: 353 CSSLASFQQARTV-------HGIIIHCFLGNQLALDTAVVDLYVKCGSLMHARKVFDRMK 405
CS ++ + + HGI Q+ +VDL + L A K+ M+
Sbjct: 396 CSHEGLVEEGKRLFETMWRDHGI------KPQIEHYACMVDLLGRANRLDEAAKMVQDMR 449
Query: 406 -QKNVISWSTMISGYGMHGHGREALFLFDQMKALIKPDHITFVSVLSACSHAGLIDE 461
+ W +++ +HG+ A ++ AL + +V + + A + DE
Sbjct: 450 TEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDE 506
>sp|Q9FIB2|PP373_ARATH Putative pentatricopeptide repeat-containing protein At5g09950
OS=Arabidopsis thaliana GN=PCMP-H35 PE=3 SV=1
Length = 995
Score = 442 bits (1136), Expect = e-123, Method: Compositional matrix adjust.
Identities = 242/645 (37%), Positives = 373/645 (57%), Gaps = 34/645 (5%)
Query: 81 TNLVSQYASLGSISHAFSLFSSVSDSCDLFLWNVMIRAFVDNRQFDRSLQLYAQMRELDI 140
LV+ YA GSI+ A +F ++D D WN MI N F +++ Y MR DI
Sbjct: 353 NGLVNMYAKCGSIADARRVFYFMTDK-DSVSWNSMITGLDQNGCFIEAVERYKSMRRHDI 411
Query: 141 NPDKFTFPFVLKACGYLRDIEFGVKVHKDAVDSGYWSDVFVGNSLIAMYGKCGRVDVCRQ 200
P FT L +C L+ + G ++H +++ G +V V N+L+ +Y + G ++ CR+
Sbjct: 412 LPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRK 471
Query: 201 LFDEMPERNVVTWSSLTGAYAQNG-CYEEGLLLFKRMMDEGIRPNRVVILNAMACVRKVS 259
+F MPE + V+W+S+ GA A++ E ++ F G + NR+ + ++ V +S
Sbjct: 472 IFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLS 531
Query: 260 EAD---DVCRVVVDNGLDLDQSLQNAAMVMYARCGRMDMARRFFEGILNK-DLVSWTSMI 315
+ + + + N + + + +NA + Y +CG MD + F + + D V+W SMI
Sbjct: 532 FGELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMI 591
Query: 316 EAYAQADLPLEALEVYRQMILRRVLPDSVTFLGVIRACSSLASFQQARTVHGIIIHCFLG 375
Y +L +AL++ M+ DS + V+ A +S+A+ ++ VH + L
Sbjct: 592 SGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLE 651
Query: 376 NQLALDTAVVDLYVKCGSLMHARKVFDRMKQKNVISWSTMISGYGMHGHGREALFLFDQM 435
+ + + +A+VD+Y KCG L +A + F+ M +N SW++MISGY HG G EAL LF+ M
Sbjct: 652 SDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETM 711
Query: 436 K--ALIKPDHITFVSVLSACSHAGLIDEGWECFNSMLRDFGVAPRPEHYACMVDMLGRAG 493
K PDH+TFV VLSACSHAGL++EG++ F SM +G+APR EH++CM D+LGRAG
Sbjct: 712 KLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAG 771
Query: 494 KLNEAREFIERMPIRPDAGVWGSLLGA-CRIHS-NVELAEMAAKALFDLDAENPGRYVIL 551
+L++ +FIE+MP++P+ +W ++LGA CR + EL + AA+ LF L+ EN YV+L
Sbjct: 772 ELDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLL 831
Query: 552 SNIYASSGKRIEANRIRALMKRRGVKKITGHTVIEIKNKVHTFVAGDRSQPQTELTYSEL 611
N+YA+ G+ + + R MK VKK G++ + +K+ VH FVAGD+S P ++ Y +L
Sbjct: 832 GNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKSHPDADVIYKKL 891
Query: 612 AKLMDRIRREGYTPDLNF-----------------------PFVFGLLNSGPGSAIRIKK 648
+L ++R GY P F FV S IRI K
Sbjct: 892 KELNRKMRDAGYVPQTGFALYDLEQENKEEILSYHSEKLAVAFVLAAQRSST-LPIRIMK 950
Query: 649 NLRVCGDCHTATKFISKVTGREIIVRDAHRFHHFKDGTCSCGDYW 693
NLRVCGDCH+A K+ISK+ GR+II+RD++RFHHF+DG CSC D+W
Sbjct: 951 NLRVCGDCHSAFKYISKIEGRQIILRDSNRFHHFQDGACSCSDFW 995
Score = 152 bits (384), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 134/509 (26%), Positives = 236/509 (46%), Gaps = 28/509 (5%)
Query: 47 ISSIKQCQTLQSLKTLHAFTLRS---RFYHHHDLFLVTNLVSQY-ASLGSISHAFSLFSS 102
+S ++ CQ + S+ L + + + D + L+S Y +GS+ +A F
Sbjct: 106 VSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGD 165
Query: 103 VSDSCDLFLWNVMIRAFVDNRQFDRSLQLYAQMRELDINPDKFTF-PFVLKACGYLR-DI 160
+ + + WN +I + + ++++ M+ P ++TF V AC D+
Sbjct: 166 I-EVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDV 224
Query: 161 EFGVKVHKDAVDSGYWSDVFVGNSLIAMYGKCGRVDVCRQLFDEMPERNVVTWSSLTGAY 220
++ SG +D+FVG+ L++ + K G + R++F++M RN VT + L
Sbjct: 225 RLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGL 284
Query: 221 AQNGCYEEGLLLF---KRMMDEGIRPNRVVIL------NAMACVRKVSEADDVCRVVVDN 271
+ EE LF M+D + P VIL ++A + + +V V+
Sbjct: 285 VRQKWGEEATKLFMDMNSMID--VSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITT 342
Query: 272 GL-DLDQSLQNAAMVMYARCGRMDMARRFFEGILNKDLVSWTSMIEAYAQADLPLEALEV 330
GL D + N + MYA+CG + ARR F + +KD VSW SMI Q +EA+E
Sbjct: 343 GLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVER 402
Query: 331 YRQMILRRVLPDSVTFLGVIRACSSLASFQQARTVHGIIIHCFLGNQLALDTAVVDLYVK 390
Y+ M +LP S T + + +C+SL + + +HG + + +++ A++ LY +
Sbjct: 403 YKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAE 462
Query: 391 CGSLMHARKVFDRMKQKNVISWSTMISGYGMHGHG-REALFLF-DQMKALIKPDHITFVS 448
G L RK+F M + + +SW+++I EA+ F + +A K + ITF S
Sbjct: 463 TGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSS 522
Query: 449 VLSACSHAGLIDEGWECFNSMLRDFGVAPRPEHYACMVDMLGRAGKLNEAREFIERMPIR 508
VLSA S + G + L++ +A ++ G+ G+++ + RM R
Sbjct: 523 VLSAVSSLSFGELGKQIHGLALKN-NIADEATTENALIACYGKCGEMDGCEKIFSRMAER 581
Query: 509 PDAGVWGSLLGACRIHSNVELAEMAAKAL 537
D W S++ IH+ E+ AKAL
Sbjct: 582 RDNVTWNSMISG-YIHN-----ELLAKAL 604
Score = 121 bits (304), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 100/375 (26%), Positives = 175/375 (46%), Gaps = 28/375 (7%)
Query: 162 FGVKVHKDAVDSGYWSDVFVGNSLIAMYGKCGRVDVCRQLFDEMPERNVVTWSSLTGAYA 221
F +++K+ +D DV++ N+LI Y + G R++FDEMP RN V+W+ + Y+
Sbjct: 23 FHSRLYKNRLDK----DVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYS 78
Query: 222 QNGCYEEGLLLFKRMMDEGIRPNRVVILNAMACVRKVSEAD-----DVCRVVVDNGLDLD 276
+NG ++E L+ + M+ EGI N+ ++ + +++ + ++ +D
Sbjct: 79 RNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVD 138
Query: 277 QSLQNAAMVMYARC-GRMDMARRFFEGILNKDLVSWTSMIEAYAQADLPLEALEVYRQMI 335
+ N + MY +C G + A F I K+ VSW S+I Y+QA A ++ M
Sbjct: 139 AVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQ 198
Query: 336 LRRVLPDSVTFLGVIRACSSLASFQQARTVHGI---IIHCFLGNQLALDTAVVDLYVKCG 392
P TF ++ SL R + I I L L + + +V + K G
Sbjct: 199 YDGSRPTEYTFGSLVTTACSLTE-PDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSG 257
Query: 393 SLMHARKVFDRMKQKNVISWSTMISGYGMHGHGREALFLFDQMKALIKPDHITFVSVLSA 452
SL +ARKVF++M+ +N ++ + ++ G G EA LF M ++I ++V +LS+
Sbjct: 258 SLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSS 317
Query: 453 CSHAGLIDE-----GWE----CFNSMLRDFGVAPRPEHYACMVDMLGRAGKLNEAREFIE 503
L +E G E + L DF V +V+M + G + +AR
Sbjct: 318 FPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNG----LVNMYAKCGSIADARRVFY 373
Query: 504 RMPIRPDAGVWGSLL 518
M + D+ W S++
Sbjct: 374 FMTDK-DSVSWNSMI 387
Score = 65.9 bits (159), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 55/99 (55%), Gaps = 1/99 (1%)
Query: 362 ARTVHGIIIHCFLGNQLALDTAVVDLYVKCGSLMHARKVFDRMKQKNVISWSTMISGYGM 421
AR H + L + L +++ Y++ G + ARKVFD M +N +SW+ ++SGY
Sbjct: 20 ARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSR 79
Query: 422 HGHGREAL-FLFDQMKALIKPDHITFVSVLSACSHAGLI 459
+G +EAL FL D +K I + FVSVL AC G +
Sbjct: 80 NGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSV 118
>sp|Q9SY02|PP301_ARATH Pentatricopeptide repeat-containing protein At4g02750
OS=Arabidopsis thaliana GN=PCMP-H24 PE=3 SV=1
Length = 781
Score = 441 bits (1134), Expect = e-123, Method: Compositional matrix adjust.
Identities = 239/645 (37%), Positives = 363/645 (56%), Gaps = 56/645 (8%)
Query: 81 TNLVSQYASLGSISHAFSLFSSVSDSCDLFLWNVMIRAFVDNRQFDRSLQLYAQMRELDI 140
++S YA G + A S+F + + D+ WN ++ A+V N + + + L+ + RE
Sbjct: 161 NTMLSGYAQNGCVDDARSVFDRMPEKNDVS-WNALLSAYVQNSKMEEACMLF-KSRE--- 215
Query: 141 NPDKFTFPFVLKAC---GYLRDIEFGVKVHKDAVDSGYWSDVFVGNSLIAMYGKCGRVDV 197
+ V C G+++ + + + DS DV N++I Y + G++D
Sbjct: 216 -----NWALVSWNCLLGGFVKKKK--IVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDE 268
Query: 198 CRQLFDEMPERNVVTWSSLTGAYAQNGCYEEGLLLFKRMMDEGIRPNR-VVILNAMACVR 256
RQLFDE P ++V TW+++ Y QN EE LF +M P R V NAM
Sbjct: 269 ARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKM------PERNEVSWNAMLAGY 322
Query: 257 KVSEADDVCRVVVDNGLDLDQSLQNAAMVMYARCGRMDMARRFFEGILNKDLVSWTSMIE 316
E ++ + + D + S N + YA+CG++ A+ F+ + +D VSW +MI
Sbjct: 323 VQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIA 382
Query: 317 AYAQADLPLEALEVYRQMILRRVLPDSVTFLGVIRACSSLASFQQARTVHGIIIH----- 371
Y+Q+ EAL ++ QM + +F + C+ + + + + +HG ++
Sbjct: 383 GYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYET 442
Query: 372 -CFLGNQLALDTAVVDLYVKCGSLMHARKVFDRMKQKNVISWSTMISGYGMHGHGREALF 430
CF+GN L L +Y KCGS+ A +F M K+++SW+TMI+GY HG G AL
Sbjct: 443 GCFVGNALLL------MYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALR 496
Query: 431 LFDQMK-ALIKPDHITFVSVLSACSHAGLIDEGWECFNSMLRDFGVAPRPEHYACMVDML 489
F+ MK +KPD T V+VLSACSH GL+D+G + F +M +D+GV P +HYACMVD+L
Sbjct: 497 FFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLL 556
Query: 490 GRAGKLNEAREFIERMPIRPDAGVWGSLLGACRIHSNVELAEMAAKALFDLDAENPGRYV 549
GRAG L +A ++ MP PDA +WG+LLGA R+H N ELAE AA +F ++ EN G YV
Sbjct: 557 GRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYV 616
Query: 550 ILSNIYASSGKRIEANRIRALMKRRGVKKITGHTVIEIKNKVHTFVAGDRSQPQTELTYS 609
+LSN+YASSG+ + ++R M+ +GVKK+ G++ IEI+NK HTF GD P+ + ++
Sbjct: 617 LLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFA 676
Query: 610 ELAKLMDRIRREGYTPDLN---------------------FPFVFGLLNSGPGSAIRIKK 648
L +L R+++ GY + +G++ G IR+ K
Sbjct: 677 FLEELDLRMKKAGYVSKTSVVLHDVEEEEKERMVRYHSERLAVAYGIMRVSSGRPIRVIK 736
Query: 649 NLRVCGDCHTATKFISKVTGREIIVRDAHRFHHFKDGTCSCGDYW 693
NLRVC DCH A K+++++TGR II+RD +RFHHFKDG+CSCGDYW
Sbjct: 737 NLRVCEDCHNAIKYMARITGRLIILRDNNRFHHFKDGSCSCGDYW 781
Score = 144 bits (363), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 121/471 (25%), Positives = 206/471 (43%), Gaps = 96/471 (20%)
Query: 81 TNLVSQYASLGSISHAFSLFSSVSDSCDLFLWNVMIRAFVDNRQFDRSLQLYAQMRELDI 140
++S Y G A LF + + DL WNVMI+ +V NR ++ +L+ M E D+
Sbjct: 99 NGMISGYLRNGEFELARKLFDEMPER-DLVSWNVMIKGYVRNRNLGKARELFEIMPERDV 157
Query: 141 NPDKFTFPFVLKACGYLRDIEFGVKVHKDAVDSGYWSDVFVGNSLIAMYGKCGRVDVCRQ 200
C + N++++ Y + G VD R
Sbjct: 158 -------------CSW--------------------------NTMLSGYAQNGCVDDARS 178
Query: 201 LFDEMPERNVVTWSSLTGAYAQNGCYEEGLLLFKRMMDEGIRPNRVVI-----LNAMACV 255
+FD MPE+N V+W++L AY QN EE +LFK R N ++ L
Sbjct: 179 VFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKS------RENWALVSWNCLLGGFVKK 232
Query: 256 RKVSEADDVCRVVVDNGLDLDQSLQNAAMVMYARCGRMDMARRFFEGILNKDLVSWTSMI 315
+K+ EA R D+ D N + YA+ G++D AR+ F+ +D+ +WT+M+
Sbjct: 233 KKIVEA----RQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMV 288
Query: 316 EAYAQADLPLEALEVYRQMILRRVLPDSVTFLGVIRACSSLASFQQARTVHGIIIHCFLG 375
Y Q + EA E++ +M R + + G ++ + A+ + ++ C
Sbjct: 289 SGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQG----ERMEMAKELFD-VMPC--- 340
Query: 376 NQLALDTAVVDLYVKCGSLMHARKVFDRMKQKNVISWSTMISGYGMHGHGREALFLFDQM 435
++ ++ Y +CG + A+ +FD+M +++ +SW+ MI+GY GH EAL LF QM
Sbjct: 341 RNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQM 400
Query: 436 -KALIKPDHITFVSVLSACS-----------HAGLIDEGWE--CF--NSMLRDFGVAPRP 479
+ + + +F S LS C+ H L+ G+E CF N++L
Sbjct: 401 EREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLL-------- 452
Query: 480 EHYACMVDMLGRAGKLNEAREFIERMPIRPDAGVWGSLLGACRIHSNVELA 530
M + G + EA + + M + D W +++ H E+A
Sbjct: 453 --------MYCKCGSIEEANDLFKEMAGK-DIVSWNTMIAGYSRHGFGEVA 494
Score = 100 bits (248), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 96/400 (24%), Positives = 173/400 (43%), Gaps = 58/400 (14%)
Query: 177 SDVFVGNSLIAMYGKCGRVDVCRQLFDEMPERNVVTWSSLTGAYAQNGCYEEGLLLFKRM 236
SD+ N I+ Y + GR + ++F MP + V+++ + Y +NG +E LF M
Sbjct: 62 SDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEM 121
Query: 237 MDEGIRPNRVVILNAMACVRKVSEADDVCRVVVDNGLDLDQSLQNAAMVMYARCGRMDMA 296
+ + V+I R + +A ++ ++ + D N + YA+ G +D A
Sbjct: 122 PERDLVSWNVMI-KGYVRNRNLGKARELFEIMPER----DVCSWNTMLSGYAQNGCVDDA 176
Query: 297 RRFFEGILNKDLVSWTSMIEAYAQADLPLEALEVYRQMILRRVLPDSVTFLGVIRACSSL 356
R F+ + K+ VSW +++ AY Q EA +++ R +L
Sbjct: 177 RSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKS-----------------RENWAL 219
Query: 357 ASFQQARTVHGIIIHCFLGNQLALDTAVVDLYVKCGSLMHARKVFDRMKQKNVISWSTMI 416
S+ +C LG +VK ++ AR+ FD M ++V+SW+T+I
Sbjct: 220 VSW-----------NCLLGG-----------FVKKKKIVEARQFFDSMNVRDVVSWNTII 257
Query: 417 SGYGMHGHGREALFLFDQMKALIKPDHITFVSVLSACSHAGLIDEGWECFNSMLRDFGVA 476
+GY G EA LFD+ D T+ +++S +++E E F+ M V+
Sbjct: 258 TGYAQSGKIDEARQLFDESPV---QDVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVS 314
Query: 477 PRPEHYACMVDMLGRAGKLNEAREFIERMPIRPDAGVWGSLLGACRIHSNVELAEMAAKA 536
+ M+ + ++ A+E + MP R + W +++ + AK
Sbjct: 315 -----WNAMLAGYVQGERMEMAKELFDVMPCR-NVSTWNTMITGYAQCGKIS----EAKN 364
Query: 537 LFD-LDAENPGRYVILSNIYASSGKRIEANRIRALMKRRG 575
LFD + +P + + Y+ SG EA R+ M+R G
Sbjct: 365 LFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREG 404
>sp|Q9FJY7|PP449_ARATH Pentatricopeptide repeat-containing protein At5g66520
OS=Arabidopsis thaliana GN=PCMP-H61 PE=2 SV=1
Length = 620
Score = 437 bits (1124), Expect = e-121, Method: Compositional matrix adjust.
Identities = 240/674 (35%), Positives = 356/674 (52%), Gaps = 98/674 (14%)
Query: 47 ISSIKQCQTLQSLKTLHAFTLRSRFYHHHDLFLVTNLVSQYASLGSISHAFSLFSSVS-- 104
+S +++C + LK +HA L++ D + +T +S + S S F ++ +
Sbjct: 18 MSCLQRCSKQEELKQIHARMLKTGLMQ--DSYAITKFLS--FCISSTSSDFLPYAQIVFD 73
Query: 105 --DSCDLFLWNVMIRAFVDNRQFDRSLQLYAQMRELDINPDKFTFPFVLKACGYLRDIEF 162
D D FLWN+MIR F + + +RSL LY +M + +TFP +LKAC L E
Sbjct: 74 GFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEE 133
Query: 163 GVKVHKDAVDSGYWSDVFVGNSLIAMYGKCGRVDVCRQLFDEMPERNVVTWSSLTGAYAQ 222
++H GY +DV+ NS L +YA
Sbjct: 134 TTQIHAQITKLGYENDVYAVNS-------------------------------LINSYAV 162
Query: 223 NGCYEEGLLLFKRMMDEGIRPNRVVILNAMACVRKVSEADDVCRVVVDNGLDLDQSLQNA 282
G ++ LLF R + E DDV N+
Sbjct: 163 TGNFKLAHLLFDR----------------------IPEPDDVS--------------WNS 186
Query: 283 AMVMYARCGRMDMARRFFEGILNKDLVSWTSMIEAYAQADLPLEALEVYRQMILRRVLPD 342
+ Y + G+MD+A F + K+ +SWT+MI Y QAD+ EAL+++ +M V PD
Sbjct: 187 VIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPD 246
Query: 343 SVTFLGVIRACSSLASFQQARTVHGIIIHCFLGNQLALDTAVVDLYVKCGSLMHARKVFD 402
+V+ + AC+ L + +Q + +H + + L ++D+Y KCG + A +VF
Sbjct: 247 NVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFK 306
Query: 403 RMKQKNVISWSTMISGYGMHGHGREALFLFDQMKAL-IKPDHITFVSVLSACSHAGLIDE 461
+K+K+V +W+ +ISGY HGHGREA+ F +M+ + IKP+ ITF +VL+ACS+ GL++E
Sbjct: 307 NIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEE 366
Query: 462 GWECFNSMLRDFGVAPRPEHYACMVDMLGRAGKLNEAREFIERMPIRPDAGVWGSLLGAC 521
G F SM RD+ + P EHY C+VD+LGRAG L+EA+ FI+ MP++P+A +WG+LL AC
Sbjct: 367 GKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKAC 426
Query: 522 RIHSNVELAEMAAKALFDLDAENPGRYVILSNIYASSGKRIEANRIRALMKRRGVKKITG 581
RIH N+EL E + L +D + GRYV +NI+A K +A R LMK +GV K+ G
Sbjct: 427 RIHKNIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPG 486
Query: 582 HTVIEIKNKVHTFVAGDRSQPQTELTYSELAKLMDRIRREGYTPDL-------------- 627
+ I ++ H F+AGDRS P+ E S+ + ++ GY P+L
Sbjct: 487 CSTISLEGTTHEFLAGDRSHPEIEKIQSKWRIMRRKLEENGYVPELEEMLLDLVDDDERE 546
Query: 628 --------NFPFVFGLLNSGPGSAIRIKKNLRVCGDCHTATKFISKVTGREIIVRDAHRF 679
+GL+ + PG+ IRI KNLRVC DCH TK ISK+ R+I++RD RF
Sbjct: 547 AIVHQHSEKLAITYGLIKTKPGTIIRIMKNLRVCKDCHKVTKLISKIYKRDIVMRDRTRF 606
Query: 680 HHFKDGTCSCGDYW 693
HHF+DG CSCGDYW
Sbjct: 607 HHFRDGKCSCGDYW 620
>sp|Q5G1T1|PP272_ARATH Pentatricopeptide repeat-containing protein At3g49170,
chloroplastic OS=Arabidopsis thaliana GN=EMB2261 PE=2
SV=1
Length = 850
Score = 435 bits (1118), Expect = e-121, Method: Compositional matrix adjust.
Identities = 229/636 (36%), Positives = 354/636 (55%), Gaps = 37/636 (5%)
Query: 92 SISHAFSLFSSVSDSCDLFLWNVMIRAFVDNRQFDRSLQLYAQMRELDINPDKFTFPFVL 151
S +A+ +F +S+ ++ W +MI + +++ + M DKFT V
Sbjct: 218 SFENAYKVFDKMSE-LNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVF 276
Query: 152 KACGYLRDIEFGVKVHKDAVDSGYWSDVFVGNSLIAMYGKC---GRVDVCRQLFDEMPER 208
AC L ++ G ++H A+ SG DV SL+ MY KC G VD CR++FD M +
Sbjct: 277 SACAELENLSLGKQLHSWAIRSGLVDDVEC--SLVDMYAKCSADGSVDDCRKVFDRMEDH 334
Query: 209 NVVTWSSLTGAYAQN-GCYEEGLLLFKRMMDEG-IRPNRVVILNAMACVRKVSE---ADD 263
+V++W++L Y +N E + LF M+ +G + PN +A +S+
Sbjct: 335 SVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQ 394
Query: 264 VCRVVVDNGLDLDQSLQNAAMVMYARCGRMDMARRFFEGILNKDLVSWTSMIEAYAQADL 323
V GL + S+ N+ + M+ + RM+ A+R FE + K+LVS+ + ++ +
Sbjct: 395 VLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLN 454
Query: 324 PLEALEVYRQMILRRVLPDSVTFLGVIRACSSLASFQQARTVHGIIIHCFLGNQLALDTA 383
+A ++ ++ R + + TF ++ +++ S ++ +H ++ L + A
Sbjct: 455 FEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNA 514
Query: 384 VVDLYVKCGSLMHARKVFDRMKQKNVISWSTMISGYGMHGHGREALFLFDQM-KALIKPD 442
++ +Y KCGS+ A +VF+ M+ +NVISW++MI+G+ HG L F+QM + +KP+
Sbjct: 515 LISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPN 574
Query: 443 HITFVSVLSACSHAGLIDEGWECFNSMLRDFGVAPRPEHYACMVDMLGRAGKLNEAREFI 502
+T+V++LSACSH GL+ EGW FNSM D + P+ EHYACMVD+L RAG L +A EFI
Sbjct: 575 EVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFI 634
Query: 503 ERMPIRPDAGVWGSLLGACRIHSNVELAEMAAKALFDLDAENPGRYVILSNIYASSGKRI 562
MP + D VW + LGACR+HSN EL ++AA+ + +LD P Y+ LSNIYA +GK
Sbjct: 635 NTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWE 694
Query: 563 EANRIRALMKRRGVKKITGHTVIEIKNKVHTFVAGDRSQPQTELTYSELAKLMDRIRREG 622
E+ +R MK R + K G + IE+ +K+H F GD + P Y EL +L+ I+R G
Sbjct: 695 ESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRLITEIKRCG 754
Query: 623 YTPDLNF-------------------------PFVFGLLNSGPGSAIRIKKNLRVCGDCH 657
Y PD + FGL+++ +R+ KNLRVCGDCH
Sbjct: 755 YVPDTDLVLHKLEEENDEAEKERLLYQHSEKIAVAFGLISTSKSRPVRVFKNLRVCGDCH 814
Query: 658 TATKFISKVTGREIIVRDAHRFHHFKDGTCSCGDYW 693
A K+IS V+GREI++RD +RFHHFKDG CSC DYW
Sbjct: 815 NAMKYISTVSGREIVLRDLNRFHHFKDGKCSCNDYW 850
Score = 157 bits (396), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 106/427 (24%), Positives = 209/427 (48%), Gaps = 9/427 (2%)
Query: 5 VVTQMVMQQKLTKFCHLRQQWRLFFSASSPQQQTEFFDPETCISSIKQCQTLQSLKTLHA 64
VVT +M + + R+ R F +++ F + S+ + + L K LH+
Sbjct: 234 VVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHS 293
Query: 65 FTLRSRFYHHHDLFLVTNLVSQYASLGSISHAFSLFSSVSDSCDLFLWNVMIRAFVDNRQ 124
+ +RS + LV ++ ++ ++ GS+ +F + D + W +I ++ N
Sbjct: 294 WAIRSGLVDDVECSLV-DMYAKCSADGSVDDCRKVFDRMEDH-SVMSWTALITGYMKNCN 351
Query: 125 F-DRSLQLYAQM-RELDINPDKFTFPFVLKACGYLRDIEFGVKVHKDAVDSGYWSDVFVG 182
++ L+++M + + P+ FTF KACG L D G +V A G S+ V
Sbjct: 352 LATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVA 411
Query: 183 NSLIAMYGKCGRVDVCRQLFDEMPERNVVTWSSLTGAYAQNGCYEEGLLLFKRMMDEGIR 242
NS+I+M+ K R++ ++ F+ + E+N+V++++ +N +E+ L + + +
Sbjct: 412 NSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELG 471
Query: 243 PNRVV---ILNAMACVRKVSEADDVCRVVVDNGLDLDQSLQNAAMVMYARCGRMDMARRF 299
+ +L+ +A V + + + + VV GL +Q + NA + MY++CG +D A R
Sbjct: 472 VSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRV 531
Query: 300 FEGILNKDLVSWTSMIEAYAQADLPLEALEVYRQMILRRVLPDSVTFLGVIRACSSLASF 359
F + N++++SWTSMI +A+ + LE + QMI V P+ VT++ ++ ACS +
Sbjct: 532 FNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLV 591
Query: 360 QQA-RTVHGIIIHCFLGNQLALDTAVVDLYVKCGSLMHARKVFDRMK-QKNVISWSTMIS 417
+ R + + + ++ +VDL + G L A + + M Q +V+ W T +
Sbjct: 592 SEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLG 651
Query: 418 GYGMHGH 424
+H +
Sbjct: 652 ACRVHSN 658
Score = 139 bits (351), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 108/401 (26%), Positives = 186/401 (46%), Gaps = 24/401 (5%)
Query: 140 INP-DKFTFPFVLKACGYLRDIEFGVKVHKDAVDSGYWSDVFVGNSLIAMYGKCGRVDVC 198
I P D TF +LK+C RD G VH ++ D + NSLI++Y K G
Sbjct: 57 IRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKA 116
Query: 199 RQLFDEM---PERNVVTWSSLTGAYAQNGCYEEGLLLFKRMMDEGIRPNRVVILNAMACV 255
+F+ M +R+VV+WS++ Y NG + + +F ++ G+ PN A +
Sbjct: 117 EDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCY---TAVI 173
Query: 256 RKVSEAD--DVCRVVV-----DNGLDLDQSLQNAAMVMYARC-GRMDMARRFFEGILNKD 307
R S +D V RV + + D + + + M+ + + A + F+ + +
Sbjct: 174 RACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELN 233
Query: 308 LVSWTSMIEAYAQADLPLEALEVYRQMILRRVLPDSVTFLGVIRACSSLASFQQARTVHG 367
+V+WT MI Q P EA+ + M+L D T V AC+ L + + +H
Sbjct: 234 VVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHS 293
Query: 368 IIIHCFLGNQLALDTAVVDLYVKC---GSLMHARKVFDRMKQKNVISWSTMISGYGMHGH 424
I L + ++ ++VD+Y KC GS+ RKVFDRM+ +V+SW+ +I+GY + +
Sbjct: 294 WAIRSGLVDD--VECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCN 351
Query: 425 -GREALFLFDQM--KALIKPDHITFVSVLSACSHAGLIDEGWECFNSMLRDFGVAPRPEH 481
EA+ LF +M + ++P+H TF S AC + G + + G+A
Sbjct: 352 LATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKR-GLASNSSV 410
Query: 482 YACMVDMLGRAGKLNEAREFIERMPIRPDAGVWGSLLGACR 522
++ M ++ ++ +A+ E + + L G CR
Sbjct: 411 ANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCR 451
Score = 95.9 bits (237), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 141/283 (49%), Gaps = 16/283 (5%)
Query: 236 MMDEGIRPNRVVILNAM--ACVR--KVSEADDVCRVVVDNGLDLDQSLQNAAMVMYARCG 291
M +GIRP V +++ +C+R V +++ ++ D L N+ + +Y++ G
Sbjct: 52 MARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSG 111
Query: 292 RMDMARRFFEGIL---NKDLVSWTSMIEAYAQADLPLEALEVYRQMILRRVLPDSVTFLG 348
A FE + +D+VSW++M+ Y L+A++V+ + + ++P+ +
Sbjct: 112 DSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTA 171
Query: 349 VIRACSSLASFQQARTVHGIIIHC-FLGNQLALDTAVVDLYVKC-GSLMHARKVFDRMKQ 406
VIRACS+ R G ++ + + + +++D++VK S +A KVFD+M +
Sbjct: 172 VIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSE 231
Query: 407 KNVISWSTMISGYGMHGHGREAL-FLFDQMKALIKPDHITFVSVLSACSHAGLIDEGWEC 465
NV++W+ MI+ G REA+ F D + + + D T SV SAC+ + G +
Sbjct: 232 LNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQL 291
Query: 466 FNSMLRDFGVAPRPEHYACMVDMLGRA---GKLNEAREFIERM 505
+ +R G+ E +VDM + G +++ R+ +RM
Sbjct: 292 HSWAIRS-GLVDDVE--CSLVDMYAKCSADGSVDDCRKVFDRM 331
>sp|Q9SS60|PP210_ARATH Pentatricopeptide repeat-containing protein At3g03580
OS=Arabidopsis thaliana GN=PCMP-H23 PE=2 SV=1
Length = 882
Score = 432 bits (1110), Expect = e-120, Method: Compositional matrix adjust.
Identities = 231/659 (35%), Positives = 374/659 (56%), Gaps = 32/659 (4%)
Query: 62 LHAFTLRSRFYHHHDLFLVTNLVSQYASLGSISHAFSLFSSVSDSCDLFLWNVMIRAFVD 121
LH F L+S + + + LV+ Y + A +F + D D +N MI ++
Sbjct: 229 LHGFALKSG--VNSVVVVNNGLVAMYLKFRRPTDARRVFDEM-DVRDSVSYNTMICGYLK 285
Query: 122 NRQFDRSLQLYAQMRELD-INPDKFTFPFVLKACGYLRDIEFGVKVHKDAVDSGYWSDVF 180
+ S++++ + LD PD T VL+ACG+LRD+ ++ + +G+ +
Sbjct: 286 LEMVEESVRMF--LENLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLEST 343
Query: 181 VGNSLIAMYGKCGRVDVCRQLFDEMPERNVVTWSSLTGAYAQNGCYEEGLLLFKRMMDEG 240
V N LI +Y KCG + R +F+ M ++ V+W+S+ Y Q+G E + LFK MM
Sbjct: 344 VRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIME 403
Query: 241 IRPNRVVILNAMACVRKVSE---ADDVCRVVVDNGLDLDQSLQNAAMVMYARCGRMDMAR 297
+ + + L ++ ++++ + + +G+ +D S+ NA + MYA+CG + +
Sbjct: 404 EQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSL 463
Query: 298 RFFEGILNKDLVSWTSMIEAYAQADLPLEALEVYRQMILRRVLPDSVTFLGVIRACSSLA 357
+ F + D V+W ++I A + L+V QM V+PD TFL + C+SLA
Sbjct: 464 KIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLA 523
Query: 358 SFQQARTVHGIIIHCFLGNQLALDTAVVDLYVKCGSLMHARKVFDRMKQKNVISWSTMIS 417
+ + + +H ++ ++L + A++++Y KCG L ++ +VF+RM +++V++W+ MI
Sbjct: 524 AKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIY 583
Query: 418 GYGMHGHGREALFLF-DQMKALIKPDHITFVSVLSACSHAGLIDEGWECFNSMLRDFGVA 476
YGM+G G +AL F D K+ I PD + F++++ ACSH+GL+DEG CF M + +
Sbjct: 584 AYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKID 643
Query: 477 PRPEHYACMVDMLGRAGKLNEAREFIERMPIRPDAGVWGSLLGACRIHSNVELAEMAAKA 536
P EHYAC+VD+L R+ K+++A EFI+ MPI+PDA +W S+L ACR ++E AE ++
Sbjct: 644 PMIEHYACVVDLLSRSQKISKAEEFIQAMPIKPDASIWASVLRACRTSGDMETAERVSRR 703
Query: 537 LFDLDAENPGRYVILSNIYASSGKRIEANRIRALMKRRGVKKITGHTVIEIKNKVHTFVA 596
+ +L+ ++PG ++ SN YA+ K + + IR +K + + K G++ IE+ VH F +
Sbjct: 704 IIELNPDDPGYSILASNAYAALRKWDKVSLIRKSLKDKHITKNPGYSWIEVGKNVHVFSS 763
Query: 597 GDRSQPQTELTYSELAKLMDRIRREGYTPDL----------------------NFPFVFG 634
GD S PQ+E Y L L + +EGY PD FG
Sbjct: 764 GDDSAPQSEAIYKSLEILYSLMAKEGYIPDPREVSQNLEEEEEKRRLICGHSERLAIAFG 823
Query: 635 LLNSGPGSAIRIKKNLRVCGDCHTATKFISKVTGREIIVRDAHRFHHFKDGTCSCGDYW 693
LLN+ PG+ +++ KNLRVCGDCH TK ISK+ GREI+VRDA+RFH FKDGTCSC D W
Sbjct: 824 LLNTEPGTPLQVMKNLRVCGDCHEVTKLISKIVGREILVRDANRFHLFKDGTCSCKDRW 882
Score = 233 bits (593), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 140/477 (29%), Positives = 256/477 (53%), Gaps = 9/477 (1%)
Query: 49 SIKQCQTLQSLKTLHAFTLRSRFYHHHDLFLVTNLVSQYASLGSISHAFSLFSSVSDSCD 108
++ L L+ +HA + S D F L+ +Y+ + + S+F VS + +
Sbjct: 13 ALSSSSNLNELRRIHALVI-SLGLDSSDFF-SGKLIDKYSHFREPASSLSVFRRVSPAKN 70
Query: 109 LFLWNVMIRAFVDNRQFDRSLQLYAQMRELDINPDKFTFPFVLKACGYLRDIEFGVKVHK 168
++LWN +IRAF N F +L+ Y ++RE ++PDK+TFP V+KAC L D E G V++
Sbjct: 71 VYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYE 130
Query: 169 DAVDSGYWSDVFVGNSLIAMYGKCGRVDVCRQLFDEMPERNVVTWSSLTGAYAQNGCYEE 228
+D G+ SD+FVGN+L+ MY + G + RQ+FDEMP R++V+W+SL Y+ +G YEE
Sbjct: 131 QILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEE 190
Query: 229 GLLLFKRMMDEGIRPNRVV---ILNAMACVRKVSEADDVCRVVVDNGLDLDQSLQNAAMV 285
L ++ + + I P+ +L A + V + + + +G++ + N +
Sbjct: 191 ALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVA 250
Query: 286 MYARCGRMDMARRFFEGILNKDLVSWTSMIEAYAQADLPLEALEVYRQMILRRVLPDSVT 345
MY + R ARR F+ + +D VS+ +MI Y + ++ E++ ++ + L + PD +T
Sbjct: 251 MYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLEN-LDQFKPDLLT 309
Query: 346 FLGVIRACSSLASFQQARTVHGIIIHCFLGNQLALDTAVVDLYVKCGSLMHARKVFDRMK 405
V+RAC L A+ ++ ++ + + ++D+Y KCG ++ AR VF+ M+
Sbjct: 310 VSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSME 369
Query: 406 QKNVISWSTMISGYGMHGHGREALFLFDQMKAL-IKPDHITFVSVLSACSHAGLIDEGWE 464
K+ +SW+++ISGY G EA+ LF M + + DHIT++ ++S + + G
Sbjct: 370 CKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKG 429
Query: 465 CFNSMLRDFGVAPRPEHYACMVDMLGRAGKLNEAREFIERMPIRPDAGVWGSLLGAC 521
++ ++ G+ ++DM + G++ ++ + M D W +++ AC
Sbjct: 430 LHSNGIKS-GICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGT-GDTVTWNTVISAC 484
Score = 72.4 bits (176), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 86/185 (46%), Gaps = 6/185 (3%)
Query: 349 VIRACSSLASFQQARTVHGIIIHCFLGNQLALDTAVVDLYVKCGSLMHARKVFDRMK-QK 407
+ RA SS ++ + R +H ++I L + ++D Y + VF R+ K
Sbjct: 10 ISRALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAK 69
Query: 408 NVISWSTMISGYGMHGHGREALFLFDQMK-ALIKPDHITFVSVLSACSHAGLID-EGWEC 465
NV W+++I + +G EAL + +++ + + PD TF SV+ AC AGL D E +
Sbjct: 70 NVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKAC--AGLFDAEMGDL 127
Query: 466 FNSMLRDFGVAPRPEHYACMVDMLGRAGKLNEAREFIERMPIRPDAGVWGSLLGACRIHS 525
+ D G +VDM R G L AR+ + MP+R D W SL+ H
Sbjct: 128 VYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVR-DLVSWNSLISGYSSHG 186
Query: 526 NVELA 530
E A
Sbjct: 187 YYEEA 191
>sp|Q9SHZ8|PP168_ARATH Pentatricopeptide repeat-containing protein At2g22070
OS=Arabidopsis thaliana GN=PCMP-H41 PE=3 SV=1
Length = 786
Score = 428 bits (1101), Expect = e-119, Method: Compositional matrix adjust.
Identities = 252/738 (34%), Positives = 376/738 (50%), Gaps = 121/738 (16%)
Query: 77 LFLVTNLVSQYASLGSISHAFSLFSSV---------------------SDSCDLF----- 110
++L+ NL++ Y+ G HA LF + +C+ F
Sbjct: 49 VYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQ 108
Query: 111 ----LWNVMIRAFVDNRQFDRSLQLYAQMRELDINPDKFTFPFVLKACGYLRDIEFGVKV 166
W MI + + Q+ +++++ M + I P +FT VL + R +E G KV
Sbjct: 109 RDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKV 168
Query: 167 HKDAVDSGYWSDVFVGNSLIAMYGKCG-------------------------------RV 195
H V G +V V NSL+ MY KCG ++
Sbjct: 169 HSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQM 228
Query: 196 DVCRQLFDEMPERNVVTWSSLTGAYAQNGCYEEGLLLFKRMM-DEGIRPNRVV---ILNA 251
D+ F++M ER++VTW+S+ + Q G L +F +M+ D + P+R +L+A
Sbjct: 229 DLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSA 288
Query: 252 MACVRKVSEADDVCRVVVDNGLDLDQSLQNAAMVMYARCGRMDMARRFFE---------- 301
A + K+ + +V G D+ + NA + MY+RCG ++ ARR E
Sbjct: 289 CANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIE 348
Query: 302 -----------------------GILNKDLVSWTSMIEAYAQADLPLEALEVYRQMILRR 338
+ ++D+V+WT+MI Y Q EA+ ++R M+
Sbjct: 349 GFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGG 408
Query: 339 VLPDSVTFLGVIRACSSLASFQQARTVHGIIIHCFLGNQLALDTAVVDLYVKCGSLMHAR 398
P+S T ++ SSLAS + +HG + +++ A++ +Y K G++ A
Sbjct: 409 QRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSAS 468
Query: 399 KVFDRMK-QKNVISWSTMISGYGMHGHGREALFLFDQM-KALIKPDHITFVSVLSACSHA 456
+ FD ++ +++ +SW++MI HGH EAL LF+ M ++PDHIT+V V SAC+HA
Sbjct: 469 RAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHA 528
Query: 457 GLIDEGWECFNSMLRDFGVAPRPEHYACMVDMLGRAGKLNEAREFIERMPIRPDAGVWGS 516
GL+++G + F+ M + P HYACMVD+ GRAG L EA+EFIE+MPI PD WGS
Sbjct: 529 GLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGS 588
Query: 517 LLGACRIHSNVELAEMAAKALFDLDAENPGRYVILSNIYASSGKRIEANRIRALMKRRGV 576
LL ACR+H N++L ++AA+ L L+ EN G Y L+N+Y++ GK EA +IR MK V
Sbjct: 589 LLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRV 648
Query: 577 KKITGHTVIEIKNKVHTFVAGDRSQPQTELTYSELAKLMDRIRREGYTPDL--------- 627
KK G + IE+K+KVH F D + P+ Y + K+ D I++ GY PD
Sbjct: 649 KKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKIWDEIKKMGYVPDTASVLHDLEE 708
Query: 628 ------------NFPFVFGLLNSGPGSAIRIKKNLRVCGDCHTATKFISKVTGREIIVRD 675
FGL+++ + +RI KNLRVC DCHTA KFISK+ GREIIVRD
Sbjct: 709 EVKEQILRHHSEKLAIAFGLISTPDKTTLRIMKNLRVCNDCHTAIKFISKLVGREIIVRD 768
Query: 676 AHRFHHFKDGTCSCGDYW 693
RFHHFKDG CSC DYW
Sbjct: 769 TTRFHHFKDGFCSCRDYW 786
Score = 134 bits (338), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 113/465 (24%), Positives = 195/465 (41%), Gaps = 101/465 (21%)
Query: 166 VHKDAVDSGYWSDVFVGNSLIAMYGKCGRVDVCRQLFDEMPERNVVTWSSLTGAYAQNG- 224
VH + SG V++ N+L+ +Y K G R+LFDEMP R +W+++ AY++ G
Sbjct: 36 VHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSKRGD 95
Query: 225 ----C--------------------------YEEGLLLFKRMMDEGIRPNRVVILNAMAC 254
C Y + + + M+ EGI P + + N +A
Sbjct: 96 MDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLAS 155
Query: 255 V---RKVSEADDVCRVVVDNGLDLDQSLQNAAMVMYARC--------------------- 290
V R + V +V GL + S+ N+ + MYA+C
Sbjct: 156 VAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSW 215
Query: 291 ----------GRMDMARRFFEGILNKDLVSWTSMIEAYAQADLPLEALEVYRQMILRRVL 340
G+MD+A FE + +D+V+W SMI + Q L AL+++ +M+ +L
Sbjct: 216 NAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLL 275
Query: 341 -PDSVTFLGVIRACSSLASFQQARTVH-----------GIIIHCFLG------------- 375
PD T V+ AC++L + +H GI+++ +
Sbjct: 276 SPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARR 335
Query: 376 -------NQLALD--TAVVDLYVKCGSLMHARKVFDRMKQKNVISWSTMISGYGMHGHGR 426
L ++ TA++D Y+K G + A+ +F +K ++V++W+ MI GY HG
Sbjct: 336 LIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYG 395
Query: 427 EALFLFDQM-KALIKPDHITFVSVLSACSHAGLIDEGWECFNSMLRDFGVAPRPEHYACM 485
EA+ LF M +P+ T ++LS S + G + S ++ + A +
Sbjct: 396 EAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNA-L 454
Query: 486 VDMLGRAGKLNEAREFIERMPIRPDAGVWGSLLGACRIHSNVELA 530
+ M +AG + A + + D W S++ A H + E A
Sbjct: 455 ITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEA 499
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 93/214 (43%), Gaps = 38/214 (17%)
Query: 362 ARTVHGIIIHCFLGNQLALDTAVVDLYVKCGSLMHARKVFDRM----------------- 404
A+ VH +I L + L ++++Y K G +HARK+FD M
Sbjct: 33 AQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSK 92
Query: 405 --------------KQKNVISWSTMISGYGMHGHGREAL-FLFDQMKALIKPDHITFVSV 449
Q++ +SW+TMI GY G +A+ + D +K I+P T +V
Sbjct: 93 RGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNV 152
Query: 450 LSACSHAGLIDEGWECFNSMLRDFGVAPRPEHYACMVDMLGRAGKLNEAREFIERMPIRP 509
L++ + ++ G + +S + G+ +++M + G A+ +RM +R
Sbjct: 153 LASVAATRCMETG-KKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVR- 210
Query: 510 DAGVWGSLLGACRIHSNVELAEMAAKALFDLDAE 543
D W +++ +H V ++A A F+ AE
Sbjct: 211 DISSWNAMIA---LHMQVGQMDLAM-AQFEQMAE 240
>sp|Q9SMZ2|PP347_ARATH Pentatricopeptide repeat-containing protein At4g33170
OS=Arabidopsis thaliana GN=PCMP-H53 PE=3 SV=1
Length = 990
Score = 427 bits (1098), Expect = e-118, Method: Compositional matrix adjust.
Identities = 236/646 (36%), Positives = 352/646 (54%), Gaps = 30/646 (4%)
Query: 76 DLFLV--TNLVSQYASLGSISHAFSLFSSVSDSCDLFLWNVMIRAFVDNRQFDRSLQLYA 133
DL L +L++ Y L A ++F ++S+ DL WN +I N ++ L+
Sbjct: 347 DLMLTVSNSLINMYCKLRKFGFARTVFDNMSER-DLISWNSVIAGIAQNGLEVEAVCLFM 405
Query: 134 QMRELDINPDKFTFPFVLKACGYLRD-IEFGVKVHKDAVDSGYWSDVFVGNSLIAMYGKC 192
Q+ + PD++T VLKA L + + +VH A+ SD FV +LI Y +
Sbjct: 406 QLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRN 465
Query: 193 GRVDVCRQLFDEMPERNVVTWSSLTGAYAQNGCYEEGLLLFKRMMDEGIRPNR---VVIL 249
+ LF E ++V W+++ Y Q+ + L LF M +G R + +
Sbjct: 466 RCMKEAEILF-ERHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVF 524
Query: 250 NAMACVRKVSEADDVCRVVVDNGLDLDQSLQNAAMVMYARCGRMDMARRFFEGILNKDLV 309
+ +++ V + +G DLD + + + MY +CG M A+ F+ I D V
Sbjct: 525 KTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDV 584
Query: 310 SWTSMIEAYAQADLPLEALEVYRQMILRRVLPDSVTFLGVIRACSSLASFQQARTVHGII 369
+WT+MI + A V+ QM L VLPD T + +A S L + +Q R +H
Sbjct: 585 AWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANA 644
Query: 370 IHCFLGNQLALDTAVVDLYVKCGSLMHARKVFDRMKQKNVISWSTMISGYGMHGHGREAL 429
+ N + T++VD+Y KCGS+ A +F R++ N+ +W+ M+ G HG G+E L
Sbjct: 645 LKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETL 704
Query: 430 FLFDQMKAL-IKPDHITFVSVLSACSHAGLIDEGWECFNSMLRDFGVAPRPEHYACMVDM 488
LF QMK+L IKPD +TF+ VLSACSH+GL+ E ++ SM D+G+ P EHY+C+ D
Sbjct: 705 QLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADA 764
Query: 489 LGRAGKLNEAREFIERMPIRPDAGVWGSLLGACRIHSNVELAEMAAKALFDLDAENPGRY 548
LGRAG + +A IE M + A ++ +LL ACR+ + E + A L +L+ + Y
Sbjct: 765 LGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAY 824
Query: 549 VILSNIYASSGKRIEANRIRALMKRRGVKKITGHTVIEIKNKVHTFVAGDRSQPQTELTY 608
V+LSN+YA++ K E R +MK VKK G + IE+KNK+H FV DRS QTEL Y
Sbjct: 825 VLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIY 884
Query: 609 SELAKLMDRIRREGYTPDLNFPFV---------------------FGLLNSGPGSAIRIK 647
++ ++ I++EGY P+ +F V FGLL++ P + IR+
Sbjct: 885 RKVKDMIRDIKQEGYVPETDFTLVDVEEEEKERALYYHSEKLAVAFGLLSTPPSTPIRVI 944
Query: 648 KNLRVCGDCHTATKFISKVTGREIIVRDAHRFHHFKDGTCSCGDYW 693
KNLRVCGDCH A K+I+KV REI++RDA+RFH FKDG CSCGDYW
Sbjct: 945 KNLRVCGDCHNAMKYIAKVYNREIVLRDANRFHRFKDGICSCGDYW 990
Score = 161 bits (408), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 109/428 (25%), Positives = 205/428 (47%), Gaps = 8/428 (1%)
Query: 96 AFSLFSSVSDSCDLFLWNVMIRAFVDNRQFDRSLQLYAQMRELDINPDKFTFPFVLKACG 155
+F+ + S ++ N + ++ + Q+ L+ +A M E D+ D+ TF +L
Sbjct: 267 SFANGNDASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAV 326
Query: 156 YLRDIEFGVKVHKDAVDSGYWSDVFVGNSLIAMYGKCGRVDVCRQLFDEMPERNVVTWSS 215
+ + G +VH A+ G + V NSLI MY K + R +FD M ER++++W+S
Sbjct: 327 KVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNS 386
Query: 216 LTGAYAQNGCYEEGLLLFKRMMDEGIRPNRVVILNAMACVRKVSEADDVCRVVVDNGLDL 275
+ AQNG E + LF +++ G++P++ + + + + E + + V + + +
Sbjct: 387 VIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKI 446
Query: 276 ----DQSLQNAAMVMYARCGRMDMARRFFEGILNKDLVSWTSMIEAYAQADLPLEALEVY 331
D + A + Y+R M A FE N DLV+W +M+ Y Q+ + L+++
Sbjct: 447 NNVSDSFVSTALIDAYSRNRCMKEAEILFER-HNFDLVAWNAMMAGYTQSHDGHKTLKLF 505
Query: 332 RQMILRRVLPDSVTFLGVIRACSSLASFQQARTVHGIIIHCFLGNQLALDTAVVDLYVKC 391
M + D T V + C L + Q + VH I L + + ++D+YVKC
Sbjct: 506 ALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKC 565
Query: 392 GSLMHARKVFDRMKQKNVISWSTMISGYGMHGHGREALFLFDQMKAL-IKPDHITFVSVL 450
G + A+ FD + + ++W+TMISG +G A +F QM+ + + PD T ++
Sbjct: 566 GDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLA 625
Query: 451 SACSHAGLIDEGWECFNSMLRDFGVAPRPEHYACMVDMLGRAGKLNEAREFIERMPIRPD 510
A S +++G + + L+ P +VDM + G +++A +R+ + +
Sbjct: 626 KASSCLTALEQGRQIHANALK-LNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMM-N 683
Query: 511 AGVWGSLL 518
W ++L
Sbjct: 684 ITAWNAML 691
Score = 128 bits (322), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 105/405 (25%), Positives = 182/405 (44%), Gaps = 46/405 (11%)
Query: 60 KTLHAFTLRSRFYHHHDLFLVTNLVSQYASLGSISHAFSLFSSVSDSCDLFLWNVMIRAF 119
K HA L F + + FL+ NL+S Y+ GS+++A +F + D DL WN ++ A+
Sbjct: 59 KCTHARILT--FEENPERFLINNLISMYSKCGSLTYARRVFDKMPDR-DLVSWNSILAAY 115
Query: 120 VDNRQ-----FDRSLQLYAQMRELDINPDKFTFPFVLKACGYLRDIEFGVKVHKDAVDSG 174
+ + ++ L+ +R+ + + T +LK C + + H A G
Sbjct: 116 AQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIG 175
Query: 175 YWSDVFVGNSLIAMYGKCGRVDVCRQLFDEMPERNVVTWSSLTGAYAQNGCYEEGLLLFK 234
D FV +L+ +Y K G+V + LF+EMP R+VV W+ + AY + G EE + L
Sbjct: 176 LDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSS 235
Query: 235 RMMDEGIRPNRVVILNAMACVRKVSEADDVCRVVVDNGLDLDQS----LQNAAMVMYARC 290
G+ PN + + S+A V NG D +N + Y
Sbjct: 236 AFHSSGLNPNEITLRLLARISGDDSDAGQVKSFA--NGNDASSVSEIIFRNKGLSEYLHS 293
Query: 291 GRMDMARRFFEGILNKDLVSWTSMIEAYAQADLPLEALEVYRQMILRRVLPDSVTFLGVI 350
G+ ++++++ +A M+ V D VTF+ ++
Sbjct: 294 GQ------------------YSALLKCFA-------------DMVESDVECDQVTFILML 322
Query: 351 RACSSLASFQQARTVHGIIIHCFLGNQLALDTAVVDLYVKCGSLMHARKVFDRMKQKNVI 410
+ S + VH + + L L + +++++Y K AR VFD M ++++I
Sbjct: 323 ATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLI 382
Query: 411 SWSTMISGYGMHGHGREALFLFDQ-MKALIKPDHITFVSVLSACS 454
SW+++I+G +G EA+ LF Q ++ +KPD T SVL A S
Sbjct: 383 SWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAAS 427
Score = 121 bits (303), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 116/511 (22%), Positives = 226/511 (44%), Gaps = 61/511 (11%)
Query: 76 DLFLVTNLVSQYASLGSISHAFSLFSSVSDSCDLFLWNVMIRAFVDNRQFDRSLQLYAQM 135
D F+ LV+ Y G + LF + D+ LWN+M++A+++ + ++ L +
Sbjct: 179 DEFVAGALVNIYLKFGKVKEGKVLFEEMPYR-DVVLWNLMLKAYLEMGFKEEAIDLSSAF 237
Query: 136 RELDINPDKFTFPFVLKACGYLRDIEFG-VKVHKDAVDSGYWSDVFVGNSLIAMYGKCGR 194
+NP++ T + + G D + G VK + D+ S++ N ++ Y G+
Sbjct: 238 HSSGLNPNEITLRLLARISG--DDSDAGQVKSFANGNDASSVSEIIFRNKGLSEYLHSGQ 295
Query: 195 VDVCRQLFDEMPERNVVTWSSLTGAYAQNGCYEEGLLLFKRMMDEGIRPNRVVILNAMAC 254
+ F +M E +V E + F M+ ++ + + + + C
Sbjct: 296 YSALLKCFADMVESDV----------------ECDQVTFILMLATAVKVDSLALGQQVHC 339
Query: 255 VRKVSEADDVCRVVVDNGLDLDQSLQNAAMVMYARCGRMDMARRFFEGILNKDLVSWTSM 314
+ + GLDL ++ N+ + MY + + AR F+ + +DL+SW S+
Sbjct: 340 ------------MALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSV 387
Query: 315 IEAYAQADLPLEALEVYRQMILRRVLPDSVTFLGVIRACSSLAS-FQQARTVHGIIIHCF 373
I AQ L +EA+ ++ Q++ + PD T V++A SSL ++ VH +H
Sbjct: 388 IAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVH---VHAI 444
Query: 374 LGNQLA---LDTAVVDLYVKCGSLMHARKVFDRMKQKNVISWSTMISGYGMHGHGREALF 430
N ++ + TA++D Y + + A +F+R ++++W+ M++GY G + L
Sbjct: 445 KINNVSDSFVSTALIDAYSRNRCMKEAEILFER-HNFDLVAWNAMMAGYTQSHDGHKTLK 503
Query: 431 LFDQM-KALIKPDHITFVSVLSACSHAGLIDEGWECFNSMLR-----DFGVAPRPEHYAC 484
LF M K + D T +V C I++G + ++ D V+ +
Sbjct: 504 LFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVS------SG 557
Query: 485 MVDMLGRAGKLNEAREFIERMPIRPDAGVWGSLLGACRIHSNVELAEMAAKALFDLDAEN 544
++DM + G ++ A+ + +P+ PD W +++ C I + E + L
Sbjct: 558 ILDMYVKCGDMSAAQFAFDSIPV-PDDVAWTTMISGC-IENGEEERAFHVFSQMRLMGVL 615
Query: 545 PGRYVILSNIYASS-------GKRIEANRIR 568
P + I + ASS G++I AN ++
Sbjct: 616 PDEFTIATLAKASSCLTALEQGRQIHANALK 646
>sp|Q9ZUW3|PP172_ARATH Pentatricopeptide repeat-containing protein At2g27610
OS=Arabidopsis thaliana GN=PCMP-H60 PE=2 SV=1
Length = 868
Score = 426 bits (1095), Expect = e-118, Method: Compositional matrix adjust.
Identities = 225/641 (35%), Positives = 362/641 (56%), Gaps = 33/641 (5%)
Query: 81 TNLVSQYASLGSISHAFSLFSSVSDSCDLFLWNVMIRAFVDNRQFDRSLQLYAQMRELDI 140
+L++ Y G++ A LF ++ + WN MI + N +L ++ MR +
Sbjct: 233 NSLINLYLKCGNVRKARILFDK-TEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYV 291
Query: 141 NPDKFTFPFVLKACGYLRDIEFGVKVHKDAVDSGYWSDVFVGNSLIAMYGKCGRVDVCRQ 200
+ +F V+K C L+++ F ++H V G+ D + +L+ Y KC + +
Sbjct: 292 RLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALR 351
Query: 201 LFDEMP-ERNVVTWSSLTGAYAQNGCYEEGLLLFKRMMDEGIRPNRV---VILNAMACVR 256
LF E+ NVV+W+++ + QN EE + LF M +G+RPN VIL A+ +
Sbjct: 352 LFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVI- 410
Query: 257 KVSEADDVCRVVVDNGLDLDQSLQNAAMVMYARCGRMDMARRFFEGILNKDLVSWTSMIE 316
+V VV + ++ A + Y + G+++ A + F GI +KD+V+W++M+
Sbjct: 411 ---SPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLA 467
Query: 317 AYAQADLPLEALEVYRQMILRRVLPDSVTFLGVIRACSSL-ASFQQARTVHGIIIHCFLG 375
YAQ A++++ ++ + P+ TF ++ C++ AS Q + HG I L
Sbjct: 468 GYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLD 527
Query: 376 NQLALDTAVVDLYVKCGSLMHARKVFDRMKQKNVISWSTMISGYGMHGHGREALFLFDQM 435
+ L + +A++ +Y K G++ A +VF R ++K+++SW++MISGY HG +AL +F +M
Sbjct: 528 SSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEM 587
Query: 436 KA-LIKPDHITFVSVLSACSHAGLIDEGWECFNSMLRDFGVAPRPEHYACMVDMLGRAGK 494
K +K D +TF+ V +AC+HAGL++EG + F+ M+RD +AP EH +CMVD+ RAG+
Sbjct: 588 KKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQ 647
Query: 495 LNEAREFIERMPIRPDAGVWGSLLGACRIHSNVELAEMAAKALFDLDAENPGRYVILSNI 554
L +A + IE MP + +W ++L ACR+H EL +AA+ + + E+ YV+LSN+
Sbjct: 648 LEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNM 707
Query: 555 YASSGKRIEANRIRALMKRRGVKKITGHTVIEIKNKVHTFVAGDRSQPQTELTYSELAKL 614
YA SG E ++R LM R VKK G++ IE+KNK ++F+AGDRS P + Y +L L
Sbjct: 708 YAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMKLEDL 767
Query: 615 MDRIRREGYTPDLNF---------------------PFVFGLLNSGPGSAIRIKKNLRVC 653
R++ GY PD ++ FGL+ + GS + I KNLRVC
Sbjct: 768 STRLKDLGYEPDTSYVLQDIDDEHKEAVLAQHSERLAIAFGLIATPKGSPLLIIKNLRVC 827
Query: 654 GDCHTATKFISKVTGREIIVRDAHRFHHF-KDGTCSCGDYW 693
GDCH K I+K+ REI+VRD++RFHHF DG CSCGD+W
Sbjct: 828 GDCHLVIKLIAKIEEREIVVRDSNRFHHFSSDGVCSCGDFW 868
Score = 182 bits (463), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 127/465 (27%), Positives = 219/465 (47%), Gaps = 21/465 (4%)
Query: 70 RFYHHHDLFLVTNLVSQYASLGSISHAFSLFSSVSDSCDLFLWNVMIRAFVDNRQFDRSL 129
+F D+ + T+LV Y + +F + + ++ W +I + N D L
Sbjct: 121 KFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKER-NVVTWTTLISGYARNSMNDEVL 179
Query: 130 QLYAQMRELDINPDKFTFPFVLKACGYLRDIEFGVKVHKDAVDSGYWSDVFVGNSLIAMY 189
L+ +M+ P+ FTF L G++VH V +G + V NSLI +Y
Sbjct: 180 TLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLY 239
Query: 190 GKCGRVDVCRQLFDEMPERNVVTWSSLTGAYAQNGCYEEGLLLFKRMMDEGIRPNR---V 246
KCG V R LFD+ ++VVTW+S+ YA NG E L +F M +R +
Sbjct: 240 LKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFA 299
Query: 247 VILNAMACVRKVSEADDVCRVVVDNGLDLDQSLQNAAMVMYARCGRMDMARRFFEGI-LN 305
++ A ++++ + + VV G DQ+++ A MV Y++C M A R F+ I
Sbjct: 300 SVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCV 359
Query: 306 KDLVSWTSMIEAYAQADLPLEALEVYRQMILRRVLPDSVTFLGVIRACSSLASFQQARTV 365
++VSWT+MI + Q D EA++++ +M + V P+ T+ ++ A ++ + V
Sbjct: 360 GNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPSE----V 415
Query: 366 HGIIIHCFLGNQLALDTAVVDLYVKCGSLMHARKVFDRMKQKNVISWSTMISGYGMHGHG 425
H ++ + TA++D YVK G + A KVF + K++++WS M++GY G
Sbjct: 416 HAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGET 475
Query: 426 REALFLFDQM-KALIKPDHITFVSVLSACSHAGL-IDEGWECFNSMLRDFGVAPRPEHYA 483
A+ +F ++ K IKP+ TF S+L+ C+ + +G F + R +
Sbjct: 476 EAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQG-----KQFHGFAIKSRLDSSL 530
Query: 484 C----MVDMLGRAGKLNEAREFIERMPIRPDAGVWGSLLGACRIH 524
C ++ M + G + A E +R D W S++ H
Sbjct: 531 CVSSALLTMYAKKGNIESAEEVFKRQR-EKDLVSWNSMISGYAQH 574
Score = 181 bits (460), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 126/404 (31%), Positives = 203/404 (50%), Gaps = 27/404 (6%)
Query: 130 QLYAQMRELDINPDKFTFPFVLKACGYLRDIEFGVKVHKDAVDSGYWSDVFVGNSLIAMY 189
+L+ + L + D F VLK L D FG ++H + G+ DV VG SL+ Y
Sbjct: 79 RLFLNIHRLGMEMDCSIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTY 138
Query: 190 GKCGRVDVCRQLFDEMPERNVVTWSSLTGAYAQNGCYEEGLLLFKRMMDEGIRPNRVVIL 249
K R++FDEM ERNVVTW++L YA+N +E L LF RM +EG +PN
Sbjct: 139 MKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFA 198
Query: 250 NAMACVRKVSEAD---DVCRVVVDNGLDLDQSLQNAAMVMYARCGRMDMARRFFEGILNK 306
A+ + + V VVV NGLD + N+ + +Y +CG + AR F+ K
Sbjct: 199 AALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVK 258
Query: 307 DLVSWTSMIEAYAQADLPLEALEVYRQMILRRVLPDSVTFLGVIRACSSLASFQQARTVH 366
+V+W SMI YA L LEAL ++ M L V +F VI+ C++L + +H
Sbjct: 259 SVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLH 318
Query: 367 -GIIIHCFLGNQLALDTAVVDLYVKCGSLMHARKVFDRMK-QKNVISWSTMISGYGMHGH 424
++ + FL +Q + TA++ Y KC +++ A ++F + NV+SW+ MISG+ +
Sbjct: 319 CSVVKYGFLFDQ-NIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDG 377
Query: 425 GREALFLFDQMK-ALIKPDHITFVSVLSACS-------HAGLIDEGWECFNSMLRDFGVA 476
EA+ LF +MK ++P+ T+ +L+A HA ++ +E +++ G A
Sbjct: 378 KEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPSEVHAQVVKTNYERSSTV----GTA 433
Query: 477 PRPEHYACMVDMLGRAGKLNEAREFIERMPIRPDAGVWGSLLGA 520
++D + GK+ EA + + + D W ++L
Sbjct: 434 --------LLDAYVKLGKVEEAAKVFSGIDDK-DIVAWSAMLAG 468
Score = 171 bits (434), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 111/419 (26%), Positives = 199/419 (47%), Gaps = 15/419 (3%)
Query: 48 SSIKQCQTLQSLK---TLHAFTLRSRFYHHHDLFLVTNLVSQYASLGSISHAFSLFSSVS 104
S IK C L+ L+ LH ++ F ++ T L+ Y+ ++ A LF +
Sbjct: 300 SVIKLCANLKELRFTEQLHCSVVKYGFLFDQNI--RTALMVAYSKCTAMLDALRLFKEIG 357
Query: 105 DSCDLFLWNVMIRAFVDNRQFDRSLQLYAQMRELDINPDKFTFPFVLKACGYLRDIEFGV 164
++ W MI F+ N + ++ L+++M+ + P++FT+ +L A + E
Sbjct: 358 CVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPSE--- 414
Query: 165 KVHKDAVDSGYWSDVFVGNSLIAMYGKCGRVDVCRQLFDEMPERNVVTWSSLTGAYAQNG 224
VH V + Y VG +L+ Y K G+V+ ++F + ++++V WS++ YAQ G
Sbjct: 415 -VHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTG 473
Query: 225 CYEEGLLLFKRMMDEGIRPNRVV---ILNAMACVR-KVSEADDVCRVVVDNGLDLDQSLQ 280
E + +F + GI+PN ILN A + + + + LD +
Sbjct: 474 ETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVS 533
Query: 281 NAAMVMYARCGRMDMARRFFEGILNKDLVSWTSMIEAYAQADLPLEALEVYRQMILRRVL 340
+A + MYA+ G ++ A F+ KDLVSW SMI YAQ ++AL+V+++M R+V
Sbjct: 534 SALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVK 593
Query: 341 PDSVTFLGVIRACSSLASFQQARTVHGIIIH-CFLGNQLALDTAVVDLYVKCGSLMHARK 399
D VTF+GV AC+ ++ I++ C + ++ +VDLY + G L A K
Sbjct: 594 MDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMK 653
Query: 400 VFDRMKQK-NVISWSTMISGYGMHGHGREALFLFDQMKALIKPDHITFVSVLSACSHAG 457
V + M W T+++ +H +++ A+ D +V + + + +G
Sbjct: 654 VIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESG 712
Score = 104 bits (259), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 137/265 (51%), Gaps = 14/265 (5%)
Query: 200 QLFDEMPERNVVTWSSLTGAYAQNGCYEEGLLLFKRMMDEGIRPNRVVILNAMACVRKVS 259
LFD+ P R+ ++ SL ++++G +E LF + G+ + + + V KVS
Sbjct: 48 NLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMD----CSIFSSVLKVS 103
Query: 260 EA--DDV------CRVVVDNGLDLDQSLQNAAMVMYARCGRMDMARRFFEGILNKDLVSW 311
D++ C+ + LD D S+ + + Y + R+ F+ + +++V+W
Sbjct: 104 ATLCDELFGRQLHCQCIKFGFLD-DVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTW 162
Query: 312 TSMIEAYAQADLPLEALEVYRQMILRRVLPDSVTFLGVIRACSSLASFQQARTVHGIIIH 371
T++I YA+ + E L ++ +M P+S TF + + + VH +++
Sbjct: 163 TTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVK 222
Query: 372 CFLGNQLALDTAVVDLYVKCGSLMHARKVFDRMKQKNVISWSTMISGYGMHGHGREALFL 431
L + + ++++LY+KCG++ AR +FD+ + K+V++W++MISGY +G EAL +
Sbjct: 223 NGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGM 282
Query: 432 FDQMK-ALIKPDHITFVSVLSACSH 455
F M+ ++ +F SV+ C++
Sbjct: 283 FYSMRLNYVRLSESSFASVIKLCAN 307
Score = 78.6 bits (192), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 111/230 (48%), Gaps = 3/230 (1%)
Query: 292 RMDMARRFFEGILNKDLVSWTSMIEAYAQADLPLEALEVYRQMILRRVLPDSVTFLGVIR 351
R+ A F+ +D S+ S++ +++ EA ++ + + D F V++
Sbjct: 42 RLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLK 101
Query: 352 ACSSLASFQQARTVHGIIIHCFLGNQLALDTAVVDLYVKCGSLMHARKVFDRMKQKNVIS 411
++L R +H I + +++ T++VD Y+K + RKVFD MK++NV++
Sbjct: 102 VSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVT 161
Query: 412 WSTMISGYGMHGHGREALFLFDQMKAL-IKPDHITFVSVLSACSHAGLIDEGWECFNSML 470
W+T+ISGY + E L LF +M+ +P+ TF + L + G+ G + ++
Sbjct: 162 WTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVV 221
Query: 471 RDFGVAPRPEHYACMVDMLGRAGKLNEAREFIERMPIRPDAGVWGSLLGA 520
++ G+ ++++ + G + +AR ++ ++ W S++
Sbjct: 222 KN-GLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVK-SVVTWNSMISG 269
>sp|Q56XI1|PPR25_ARATH Pentatricopeptide repeat-containing protein At1g09410
OS=Arabidopsis thaliana GN=PCMP-H18 PE=2 SV=2
Length = 705
Score = 424 bits (1089), Expect = e-117, Method: Compositional matrix adjust.
Identities = 233/637 (36%), Positives = 357/637 (56%), Gaps = 42/637 (6%)
Query: 83 LVSQYASLGSISHAFSLFSSVSDSCDLFLWNVMIRAFVDNRQFDRSLQLYAQMRELDINP 142
LVS Y G I A +F + + ++ W +++ +V N + D + L+ +M P
Sbjct: 85 LVSGYMKNGEIDEARKVFDLMPER-NVVSWTALVKGYVHNGKVDVAESLFWKM------P 137
Query: 143 DKFTFPFVLKACGYLRD--IEFGVKVHKDAVDSGYWSDVFVGNSLIAMYGKCGRVDVCRQ 200
+K + + G+L+D I+ K+++ D D S+I K GRVD R+
Sbjct: 138 EKNKVSWTVMLIGFLQDGRIDDACKLYEMIPDK----DNIARTSMIHGLCKEGRVDEARE 193
Query: 201 LFDEMPERNVVTWSSLTGAYAQNGCYEEGLLLFKRMMDEGIRPNRVVILNAMACVRKVSE 260
+FDEM ER+V+TW+++ Y QN ++ +F +M E + +L ++ +
Sbjct: 194 IFDEMSERSVITWTTMVTGYGQNNRVDDARKIFD-VMPEKTEVSWTSMLMGYVQNGRIED 252
Query: 261 ADDVCRVVVDNGLDLDQSLQNAAMVMYARCGRMDMARRFFEGILNKDLVSWTSMIEAYAQ 320
A+++ V+ + NA + + G + ARR F+ + ++ SW ++I+ + +
Sbjct: 253 AEELFEVMPVKPV----IACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHER 308
Query: 321 ADLPLEALEVYRQMILRRVLPDSVTFLGVIRACSSLASFQQARTVHGIIIHCFLGNQLAL 380
LEAL+++ M + V P T + ++ C+SLAS + VH ++ C + +
Sbjct: 309 NGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYV 368
Query: 381 DTAVVDLYVKCGSLMHARKVFDRMKQKNVISWSTMISGYGMHGHGREALFLFDQM--KAL 438
+ ++ +Y+KCG L+ ++ +FDR K++I W+++ISGY HG G EAL +F +M
Sbjct: 369 ASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGS 428
Query: 439 IKPDHITFVSVLSACSHAGLIDEGWECFNSMLRDFGVAPRPEHYACMVDMLGRAGKLNEA 498
KP+ +TFV+ LSACS+AG+++EG + + SM FGV P HYACMVDMLGRAG+ NEA
Sbjct: 429 TKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEA 488
Query: 499 REFIERMPIRPDAGVWGSLLGACRIHSNVELAEMAAKALFDLDAENPGRYVILSNIYASS 558
E I+ M + PDA VWGSLLGACR HS +++AE AK L +++ EN G Y++LSN+YAS
Sbjct: 489 MEMIDSMTVEPDAAVWGSLLGACRTHSQLDVAEFCAKKLIEIEPENSGTYILLSNMYASQ 548
Query: 559 GKRIEANRIRALMKRRGVKKITGHTVIEIKNKVHTFV-AGDRSQPQTELTYSELAKLMDR 617
G+ + +R LMK R V+K G + E++NKVH F G S P+ E L +L
Sbjct: 549 GRWADVAELRKLMKTRLVRKSPGCSWTEVENKVHAFTRGGINSHPEQESILKILDELDGL 608
Query: 618 IRREGYTPDLNFPF---------------------VFGLLNSGPGSAIRIKKNLRVCGDC 656
+R GY PD ++ + LL G IR+ KNLRVC DC
Sbjct: 609 LREAGYNPDCSYALHDVDEEEKVNSLKYHSERLAVAYALLKLSEGIPIRVMKNLRVCSDC 668
Query: 657 HTATKFISKVTGREIIVRDAHRFHHFKDGTCSCGDYW 693
HTA K ISKV REII+RDA+RFHHF++G CSC DYW
Sbjct: 669 HTAIKIISKVKEREIILRDANRFHHFRNGECSCKDYW 705
Score = 126 bits (316), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 123/513 (23%), Positives = 224/513 (43%), Gaps = 79/513 (15%)
Query: 84 VSQYASLGSISHAFSLFSSVSDSCDLFLWNVMIRAFVDNRQFDRSLQLYAQMRELDINPD 143
++ + +G I A LF S DS + WN M+ + N + +L+ +M PD
Sbjct: 24 ITHLSRIGKIHEARKLFDSC-DSKSISSWNSMVAGYFANLMPRDARKLFDEM------PD 76
Query: 144 KFTFPFVLKACGYLRDIEFGVKVHKDAVDSGYWSDVFVGNSLIAMYGKCGRVDVCRQLFD 203
+ ++ N L++ Y K G +D R++FD
Sbjct: 77 R---------------------------------NIISWNGLVSGYMKNGEIDEARKVFD 103
Query: 204 EMPERNVVTWSSLTGAYAQNGCYEEGLLLFKRMMDEGIRPNRVVILNAMACVRKVSEADD 263
MPERNVV+W++L Y NG + LF +M ++ N+V + + DD
Sbjct: 104 LMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEK----NKVSWTVMLIGFLQDGRIDD 159
Query: 264 VCRVVVDNGLDLDQSLQNAAMVMYARCGRMDMARRFFEGILNKDLVSWTSMIEAYAQADL 323
C+ + + D D + + + + GR+D AR F+ + + +++WT+M+ Y Q +
Sbjct: 160 ACK-LYEMIPDKDNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNR 218
Query: 324 PLEALEVYRQMILRRVLPDSVTFLGVIRACSSLASFQQARTVHGI--IIHCFLGNQLALD 381
+A +++ M + + + +G ++ + ++ V + +I C
Sbjct: 219 VDDARKIFDVMPEKTEVSWTSMLMGYVQN-GRIEDAEELFEVMPVKPVIAC--------- 268
Query: 382 TAVVDLYVKCGSLMHARKVFDRMKQKNVISWSTMISGYGMHGHGREALFLFDQM-KALIK 440
A++ + G + AR+VFD MK++N SW T+I + +G EAL LF M K ++
Sbjct: 269 NAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVR 328
Query: 441 PDHITFVSVLSACSHAGLIDEGWECFNSMLR-----DFGVAPRPEHYACMVDMLGRAGKL 495
P T +S+LS C+ + G + ++R D VA + ++ M + G+L
Sbjct: 329 PTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVA------SVLMTMYIKCGEL 382
Query: 496 NEAREFIERMPIRPDAGVWGSLLGACRIHSNVELAEMAAKALFDLD---AENPGRYVILS 552
+++ +R P + D +W S++ H L E A K ++ + P ++
Sbjct: 383 VKSKLIFDRFPSK-DIIMWNSIISGYASHG---LGEEALKVFCEMPLSGSTKPNEVTFVA 438
Query: 553 NIYASS--GKRIEANRIRALMKRR-GVKKITGH 582
+ A S G E +I M+ GVK IT H
Sbjct: 439 TLSACSYAGMVEEGLKIYESMESVFGVKPITAH 471
Score = 84.7 bits (208), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 143/314 (45%), Gaps = 30/314 (9%)
Query: 281 NAAMVMYARCGRMDMARRFFEGILNKDLVSWTSMIEAYAQADLPLEALEVYRQMILRRVL 340
N + +R G++ AR+ F+ +K + SW SM+ Y +P +A +++ +M R +
Sbjct: 21 NVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDRNI- 79
Query: 341 PDSVTFLGVIRACSSLASFQQARTVHGIIIHCFLGNQLALDTAVVDLYVKCGSLMHARKV 400
+++ G++ +AR V ++ + TA+V YV G + A +
Sbjct: 80 ---ISWNGLVSGYMKNGEIDEARKVFDLMPE----RNVVSWTALVKGYVHNGKVDVAESL 132
Query: 401 FDRMKQKNVISWSTMISGYGMHGHGREALFLFDQMKALIKPDHITFVSVLSACSHAGLID 460
F +M +KN +SW+ M+ G+ G +A L++ + D+I S++ G +D
Sbjct: 133 FWKMPEKNKVSWTVMLIGFLQDGRIDDACKLYEMIP---DKDNIARTSMIHGLCKEGRVD 189
Query: 461 EGWECFNSMLRDFGVAPRPEHYACMVDMLGRAGKLNEAREFIERMPIRPDAGVWGSLLGA 520
E E F+ M + + MV G+ ++++AR+ + MP + + W S+L
Sbjct: 190 EAREIFDEMSERSVIT-----WTTMVTGYGQNNRVDDARKIFDVMPEKTEVS-WTSMLMG 243
Query: 521 CRIHSNVELAEMAAKALFDLDAENPGRYVILSNIYAS----SGKRIEANRIRALMKRRGV 576
+ +E AE LF++ P + VI N S G+ +A R+ MK R
Sbjct: 244 YVQNGRIEDAE----ELFEV---MPVKPVIACNAMISGLGQKGEIAKARRVFDSMKERN- 295
Query: 577 KKITGHTVIEIKNK 590
+ TVI+I +
Sbjct: 296 -DASWQTVIKIHER 308
>sp|Q9SI53|PP147_ARATH Pentatricopeptide repeat-containing protein At2g03880,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H44 PE=2
SV=1
Length = 630
Score = 421 bits (1083), Expect = e-117, Method: Compositional matrix adjust.
Identities = 220/593 (37%), Positives = 343/593 (57%), Gaps = 24/593 (4%)
Query: 123 RQFDRSLQLYAQMRELDINPDKFTFPFVLKACGYLRDIEFGVKVHKDAVDSGYWSDVFVG 182
R R+++ ++ + D T+ ++K C R + G + + +G+ +F+
Sbjct: 40 RDLPRAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLV 99
Query: 183 NSLIAMYGKCGRVDVCRQLFDEMPERNVVTWSSLTGAYAQNGCYEEGLLLFKRMMDEGIR 242
N LI MY K ++ QLFD+MP+RNV++W+++ AY++ +++ L L M+ + +R
Sbjct: 100 NVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVR 159
Query: 243 PNRVVILNAMACVRKVSEADDVCRVVVDNGLDLDQSLQNAAMVMYARCGRMDMARRFFEG 302
PN + + +S+ + ++ GL+ D +++A + ++A+ G + A F+
Sbjct: 160 PNVYTYSSVLRSCNGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDE 219
Query: 303 ILNKDLVSWTSMIEAYAQADLPLEALEVYRQMILRRVLPDSVTFLGVIRACSSLASFQQA 362
++ D + W S+I +AQ ALE++++M + + T V+RAC+ LA +
Sbjct: 220 MVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELG 279
Query: 363 RTVHGIIIHCFLGNQLALDTAVVDLYVKCGSLMHARKVFDRMKQKNVISWSTMISGYGMH 422
H I+ L L+ A+VD+Y KCGSL A +VF++MK+++VI+WSTMISG +
Sbjct: 280 MQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQN 337
Query: 423 GHGREALFLFDQMKAL-IKPDHITFVSVLSACSHAGLIDEGWECFNSMLRDFGVAPRPEH 481
G+ +EAL LF++MK+ KP++IT V VL ACSHAGL+++GW F SM + +G+ P EH
Sbjct: 338 GYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREH 397
Query: 482 YACMVDMLGRAGKLNEAREFIERMPIRPDAGVWGSLLGACRIHSNVELAEMAAKALFDLD 541
Y CM+D+LG+AGKL++A + + M PDA W +LLGACR+ N+ LAE AAK + LD
Sbjct: 398 YGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALD 457
Query: 542 AENPGRYVILSNIYASSGKRIEANRIRALMKRRGVKKITGHTVIEIKNKVHTFVAGDRSQ 601
E+ G Y +LSNIYA+S K IR M+ RG+KK G + IE+ ++H F+ GD S
Sbjct: 458 PEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSH 517
Query: 602 PQTELTYSELAKLMDRIRREGYTPDLNF---------------------PFVFGLLNSGP 640
PQ +L +L+ R+ GY P+ NF FGL+
Sbjct: 518 PQIVEVSKKLNQLIHRLTGIGYVPETNFVLQDLEGEQMEDSLRHHSEKLALAFGLMTLPI 577
Query: 641 GSAIRIKKNLRVCGDCHTATKFISKVTGREIIVRDAHRFHHFKDGTCSCGDYW 693
IRI+KNLR+CGDCH K SK+ R I++RD R+HHF+DG CSCGDYW
Sbjct: 578 EKVIRIRKNLRICGDCHVFCKLASKLEIRSIVIRDPIRYHHFQDGKCSCGDYW 630
Score = 150 bits (380), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 123/486 (25%), Positives = 225/486 (46%), Gaps = 29/486 (5%)
Query: 8 QMVMQQKLTKFCHLRQQWRLFFSASSPQQQTEFFDPETCISSIKQCQTLQSLKTLHAFTL 67
Q ++ + T+ C+ R R + S Q + D T IK C S + +H L
Sbjct: 26 QTLLLSEFTRLCYQRDLPRAMKAMDSLQSHGLWADSATYSELIKCCI---SNRAVHEGNL 82
Query: 68 --RSRFYHHHD--LFLVTNLVSQYASLGSISHAFSLFSSVSDSCDLFLWNVMIRAFVDNR 123
R +++ H +FLV L++ Y ++ A LF + ++ W MI A+ +
Sbjct: 83 ICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQR-NVISWTTMISAYSKCK 141
Query: 124 QFDRSLQLYAQMRELDINPDKFTFPFVLKACGYLRDIEFGVKVHKDAVDSGYWSDVFVGN 183
++L+L M ++ P+ +T+ VL++C + D+ +H + G SDVFV +
Sbjct: 142 IHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDVRM---LHCGIIKEGLESDVFVRS 198
Query: 184 SLIAMYGKCGRVDVCRQLFDEMPERNVVTWSSLTGAYAQNGCYEEGLLLFKRMMDEGIRP 243
+LI ++ K G + +FDEM + + W+S+ G +AQN + L LFKRM G
Sbjct: 199 ALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIA 258
Query: 244 NRVVILNAM-ACVRKVSEADDVCRVVVDNGLDLDQSLQNAAMVMYARCGRMDMARRFFEG 302
+ + + + AC + V D D L NA + MY +CG ++ A R F
Sbjct: 259 EQATLTSVLRACTGLALLELGMQAHVHIVKYDQDLILNNALVDMYCKCGSLEDALRVFNQ 318
Query: 303 ILNKDLVSWTSMIEAYAQADLPLEALEVYRQMILRRVLPDSVTFLGVIRACSSLA----- 357
+ +D+++W++MI AQ EAL+++ +M P+ +T +GV+ ACS
Sbjct: 319 MKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDG 378
Query: 358 --SFQQARTVHGI-IIHCFLGNQLALDTAVVDLYVKCGSLMHARKVFDRMK-QKNVISWS 413
F+ + ++GI + G ++DL K G L A K+ + M+ + + ++W
Sbjct: 379 WYYFRSMKKLYGIDPVREHYG-------CMIDLLGKAGKLDDAVKLLNEMECEPDAVTWR 431
Query: 414 TMISGYGMHGHGREALFLFDQMKALIKPDHITFVSVLSACSHAGLIDEGWECFNSMLRDF 473
T++ + + A + ++ AL D T+ + + +++ D E + +RD
Sbjct: 432 TLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDSVEE-IRTRMRDR 490
Query: 474 GVAPRP 479
G+ P
Sbjct: 491 GIKKEP 496
>sp|Q9LIC3|PP227_ARATH Putative pentatricopeptide repeat-containing protein At3g13770,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H85 PE=3
SV=1
Length = 628
Score = 419 bits (1076), Expect = e-116, Method: Compositional matrix adjust.
Identities = 214/574 (37%), Positives = 333/574 (58%), Gaps = 27/574 (4%)
Query: 147 FPFVLKACGYLRDIEFGVKVHKDAVDSGYWSDVFVGNSLIAMYGKCGRVDVCRQLFDEMP 206
+ +L AC R + G +VH + + Y ++ L+ YGKC ++ R++ DEMP
Sbjct: 55 YDALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMP 114
Query: 207 ERNVVTWSSLTGAYAQNGCYEEGLLLFKRMMDEGIRPNRVVILNAM-ACVRK--VSEADD 263
E+NVV+W+++ Y+Q G E L +F MM +PN + +C+R +
Sbjct: 115 EKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQ 174
Query: 264 VCRVVVDNGLDLDQSLQNAAMVMYARCGRMDMARRFFEGILNKDLVSWTSMIEAYAQADL 323
+ ++V D + ++ + MYA+ G++ AR FE + +D+VS T++I YAQ L
Sbjct: 175 IHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGL 234
Query: 324 PLEALEVYRQMILRRVLPDSVTFLGVIRACSSLASFQQARTVHGIIIHCFLGNQLALDTA 383
EALE++ ++ + P+ VT+ ++ A S LA + H ++ L L +
Sbjct: 235 DEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNS 294
Query: 384 VVDLYVKCGSLMHARKVFDRMKQKNVISWSTMISGYGMHGHGREALFLFDQMK--ALIKP 441
++D+Y KCG+L +AR++FD M ++ ISW+ M+ GY HG GRE L LF M+ +KP
Sbjct: 295 LIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKP 354
Query: 442 DHITFVSVLSACSHAGLIDEGWECFNSMLR-DFGVAPRPEHYACMVDMLGRAGKLNEARE 500
D +T ++VLS CSH + D G F+ M+ ++G P EHY C+VDMLGRAG+++EA E
Sbjct: 355 DAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFE 414
Query: 501 FIERMPIRPDAGVWGSLLGACRIHSNVELAEMAAKALFDLDAENPGRYVILSNIYASSGK 560
FI+RMP +P AGV GSLLGACR+H +V++ E + L +++ EN G YVILSN+YAS+G+
Sbjct: 415 FIKRMPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIEIEPENAGNYVILSNLYASAGR 474
Query: 561 RIEANRIRALMKRRGVKKITGHTVIEIKNKVHTFVAGDRSQPQTELTYSELAKLMDRIRR 620
+ N +RA+M ++ V K G + I+ + +H F A DR+ P+ E +++ ++ ++++
Sbjct: 475 WADVNNVRAMMMQKAVTKEPGRSWIQHEQTLHYFHANDRTHPRREEVLAKMKEISIKMKQ 534
Query: 621 EGYTPDLN---------------------FPFVFGLLNSGPGSAIRIKKNLRVCGDCHTA 659
GY PDL+ FGL+ +G G IR+ KNLR+C DCH
Sbjct: 535 AGYVPDLSCVLYDVDEEQKEKMLLGHSEKLALTFGLIATGEGIPIRVFKNLRICVDCHNF 594
Query: 660 TKFISKVTGREIIVRDAHRFHHFKDGTCSCGDYW 693
K SKV RE+ +RD +RFH DG CSCGDYW
Sbjct: 595 AKIFSKVFEREVSLRDKNRFHQIVDGICSCGDYW 628
Score = 160 bits (405), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 101/360 (28%), Positives = 179/360 (49%), Gaps = 9/360 (2%)
Query: 54 QTLQSLKTLHAFTLRSRFYHHHDLFLVTNLVSQYASLGSISHAFSLFSSVSDSCDLFLWN 113
+ L+ + +HA +++R+ +L T L+ Y + A + + + ++ W
Sbjct: 66 RALRDGQRVHAHMIKTRYLP--ATYLRTRLLIFYGKCDCLEDARKVLDEMPEK-NVVSWT 122
Query: 114 VMIRAFVDNRQFDRSLQLYAQMRELDINPDKFTFPFVLKACGYLRDIEFGVKVHKDAVDS 173
MI + +L ++A+M D P++FTF VL +C + G ++H V
Sbjct: 123 AMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKW 182
Query: 174 GYWSDVFVGNSLIAMYGKCGRVDVCRQLFDEMPERNVVTWSSLTGAYAQNGCYEEGLLLF 233
Y S +FVG+SL+ MY K G++ R++F+ +PER+VV+ +++ YAQ G EE L +F
Sbjct: 183 NYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMF 242
Query: 234 KRMMDEGIRPNRVV---ILNAMACVRKVSEADDVCRVVVDNGLDLDQSLQNAAMVMYARC 290
R+ EG+ PN V +L A++ + + V+ L LQN+ + MY++C
Sbjct: 243 HRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKC 302
Query: 291 GRMDMARRFFEGILNKDLVSWTSMIEAYAQADLPLEALEVYRQM-ILRRVLPDSVTFLGV 349
G + ARR F+ + + +SW +M+ Y++ L E LE++R M +RV PD+VT L V
Sbjct: 303 GNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAV 362
Query: 350 IRACSSLASFQQARTVHGIIIHCFLGNQLALD--TAVVDLYVKCGSLMHARKVFDRMKQK 407
+ CS + ++ G + + +VD+ + G + A + RM K
Sbjct: 363 LSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSK 422
Score = 53.5 bits (127), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/252 (21%), Positives = 105/252 (41%), Gaps = 17/252 (6%)
Query: 23 QQWRLFFSASSPQQQTEFFDPETCISSIKQCQTLQSLKTLHAFTLRSR--FYHHHDLFLV 80
+ +F S + + ++++ L K H LR FY L
Sbjct: 237 EALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFY----AVLQ 292
Query: 81 TNLVSQYASLGSISHAFSLFSSVSDSCDLFLWNVMIRAFVDNRQFDRSLQLYAQMR-ELD 139
+L+ Y+ G++S+A LF ++ + + WN M+ + + L+L+ MR E
Sbjct: 293 NSLIDMYSKCGNLSYARRLFDNMPERTAIS-WNAMLVGYSKHGLGREVLELFRLMRDEKR 351
Query: 140 INPDKFTFPFVLKACGYLRDIEFGVKVHKDAVDSGYWSDVFVGN--SLIAMYGKCGRVDV 197
+ PD T VL C + R + G+ + V Y + + ++ M G+ GR+D
Sbjct: 352 VKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDE 411
Query: 198 CRQLFDEMPERNVV-TWSSLTGAYAQNGCYEEGLLLFKRMMDEGIRP----NRVVILNAM 252
+ MP + SL GA + + G + +R+++ I P N V++ N
Sbjct: 412 AFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIE--IEPENAGNYVILSNLY 469
Query: 253 ACVRKVSEADDV 264
A + ++ ++V
Sbjct: 470 ASAGRWADVNNV 481
>sp|Q9M2Y7|PP274_ARATH Pentatricopeptide repeat-containing protein At3g49710
OS=Arabidopsis thaliana GN=PCMP-H79 PE=2 SV=1
Length = 721
Score = 418 bits (1075), Expect = e-116, Method: Compositional matrix adjust.
Identities = 241/662 (36%), Positives = 363/662 (54%), Gaps = 39/662 (5%)
Query: 68 RSRFY--HHHDLFLVTNLVSQYASLGSISHAFSLFSSVSDSCDLFLWNVMIRAFVDNRQF 125
R+ FY ++F +V YA I A LF + D +N +I + D R+
Sbjct: 63 RAAFYSTEEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQP-DTVSYNTLISGYADARET 121
Query: 126 DRSLQLYAQMRELDINPDKFTFPFVLKACGYLRDIEFGVKVHKDAVDSGYWSDVFVGNSL 185
++ L+ +MR+L D FT ++ AC ++ ++H +V G+ S V N+
Sbjct: 122 FAAMVLFKRMRKLGFEVDGFTLSGLIAAC--CDRVDLIKQLHCFSVSGGFDSYSSVNNAF 179
Query: 186 IAMYGKCGRVDVCRQLFDEMPE-RNVVTWSSLTGAYAQNGCYEEGLLLFKRMMDEGIRPN 244
+ Y K G + +F M E R+ V+W+S+ AY Q+ + L L+K M+ +G + +
Sbjct: 180 VTYYSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKID 239
Query: 245 RVV---ILNAMACVRKVSEADDVCRVVVDNGLDLDQSLQNAAMVMYARCGRMDM---ARR 298
+LNA+ + + ++ G + + + + Y++CG D + +
Sbjct: 240 MFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEK 299
Query: 299 FFEGILNKDLVSWTSMIEAYA-QADLPLEALEVYRQMILRRVLPDSVTFLGVIRACSSLA 357
F+ IL+ DLV W +MI Y+ +L EA++ +RQM PD +F+ V ACS+L+
Sbjct: 300 VFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLS 359
Query: 358 SFQQARTVHGIIIHCFL-GNQLALDTAVVDLYVKCGSLMHARKVFDRMKQKNVISWSTMI 416
S Q + +HG+ I + N+++++ A++ LY K G+L AR VFDRM + N +S++ MI
Sbjct: 360 SPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMI 419
Query: 417 SGYGMHGHGREALFLFDQM-KALIKPDHITFVSVLSACSHAGLIDEGWECFNSMLRDFGV 475
GY HGHG EAL L+ +M + I P+ ITFV+VLSAC+H G +DEG E FN+M F +
Sbjct: 420 KGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKI 479
Query: 476 APRPEHYACMVDMLGRAGKLNEAREFIERMPIRPDAGVWGSLLGACRIHSNVELAEMAAK 535
P EHY+CM+D+LGRAGKL EA FI+ MP +P + W +LLGACR H N+ LAE AA
Sbjct: 480 EPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAAN 539
Query: 536 ALFDLDAENPGRYVILSNIYASSGKRIEANRIRALMKRRGVKKITGHTVIEIKNKVHTFV 595
L + YV+L+N+YA + K E +R M+ + ++K G + IE+K K H FV
Sbjct: 540 ELMVMQPLAATPYVMLANMYADARKWEEMASVRKSMRGKRIRKKPGCSWIEVKKKKHVFV 599
Query: 596 AGDRSQPQTELTYSELAKLMDRIRREGYTPDLNFPFV----------------------- 632
A D S P L ++M ++++ GY D + V
Sbjct: 600 AEDWSHPMIREVNEYLEEMMKKMKKVGYVMDKKWAMVKEDEAGEGDEEMRLGHHSEKLAV 659
Query: 633 -FGLLNSGPGSAIRIKKNLRVCGDCHTATKFISKVTGREIIVRDAHRFHHFKDGTCSCGD 691
FGL+++ G + + KNLR+CGDCH A KF+S V GREIIVRD RFH FKDG CSCGD
Sbjct: 660 AFGLMSTRDGEELVVVKNLRICGDCHNAIKFMSAVAGREIIVRDNLRFHCFKDGKCSCGD 719
Query: 692 YW 693
YW
Sbjct: 720 YW 721
Score = 147 bits (371), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 113/408 (27%), Positives = 183/408 (44%), Gaps = 39/408 (9%)
Query: 138 LDINPDKF-TFPFVLKACGYLRDIEFGVKVHKDAVDSGYWSDVFVGNSLIAMYGKCGR-- 194
++ P KF TF +L RD+ G +H V S S ++ N + +Y KCGR
Sbjct: 1 MNQTPWKFKTFRDLLLKSVAERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLS 60
Query: 195 -----------------------------VDVCRQLFDEMPERNVVTWSSLTGAYAQNGC 225
+ + RQLFDE+P+ + V++++L YA
Sbjct: 61 YARAAFYSTEEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARE 120
Query: 226 YEEGLLLFKRMMDEGIRPNRVVILNAM-ACVRKVSEADDVCRVVVDNGLDLDQSLQNAAM 284
++LFKRM G + + + AC +V + V G D S+ NA +
Sbjct: 121 TFAAMVLFKRMRKLGFEVDGFTLSGLIAACCDRVDLIKQLHCFSVSGGFDSYSSVNNAFV 180
Query: 285 VMYARCGRMDMARRFFEGILN-KDLVSWTSMIEAYAQADLPLEALEVYRQMILRRVLPDS 343
Y++ G + A F G+ +D VSW SMI AY Q +AL +Y++MI + D
Sbjct: 181 TYYSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDM 240
Query: 344 VTFLGVIRACSSLASFQQARTVHGIIIHCFLGNQLALDTAVVDLYVKCG---SLMHARKV 400
T V+ A +SL R HG +I + + ++D Y KCG + + KV
Sbjct: 241 FTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKV 300
Query: 401 FDRMKQKNVISWSTMISGYGMHGH-GREALFLFDQMKAL-IKPDHITFVSVLSACSHAGL 458
F + +++ W+TMISGY M+ EA+ F QM+ + +PD +FV V SACS+
Sbjct: 301 FQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSS 360
Query: 459 IDEGWECFNSMLRDFGVAPRPEHYACMVDMLGRAGKLNEAREFIERMP 506
+ + ++ + R ++ + ++G L +AR +RMP
Sbjct: 361 PSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMP 408
>sp|Q9M4P3|PP316_ARATH Pentatricopeptide repeat-containing protein At4g16835,
mitochondrial OS=Arabidopsis thaliana GN=DYW10 PE=2 SV=3
Length = 656
Score = 417 bits (1072), Expect = e-115, Method: Compositional matrix adjust.
Identities = 234/641 (36%), Positives = 359/641 (56%), Gaps = 69/641 (10%)
Query: 77 LFLVTNLVSQYASLGSISHAFSLFSSVSDSCDLFLWN-VMIRAFVDNRQFDRSLQLYAQM 135
+F + ++++ G I A +F + + + WN ++I D + + QL+ ++
Sbjct: 61 IFPLNKIIARCVRSGDIDGALRVFHGMR-AKNTITWNSLLIGISKDPSRMMEAHQLFDEI 119
Query: 136 RELDINPDKFTFPFVLKACGYLRDIEFGVKVHKDAVDSGYWSDVFVGNSLIAMYGKCGRV 195
E PD F++ +L +C Y+R++ F + + D + D N++I Y + G +
Sbjct: 120 PE----PDTFSYNIML-SC-YVRNVNF--EKAQSFFDRMPFKDAASWNTMITGYARRGEM 171
Query: 196 DVCRQLFDEMPERNVVTWSSLTGAYAQNGCYEEGLLLFKRMMDEGIRPNRVVILNAMACV 255
+ R+LF M E+N V+W+++ Y + G E+ FK + P R V+
Sbjct: 172 EKARELFYSMMEKNEVSWNAMISGYIECGDLEKASHFFK------VAPVRGVVA------ 219
Query: 256 RKVSEADDVCRVVVDNGLDLDQSLQNAAMVMYARCGRMDMARRFFEGI-LNKDLVSWTSM 314
A + Y + ++++A F+ + +NK+LV+W +M
Sbjct: 220 ------------------------WTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAM 255
Query: 315 IEAYAQADLPLEALEVYRQMILRRVLPDSVTFLGVIRACSSLASFQQARTVHGIIIHCFL 374
I Y + P + L+++R M+ + P+S + CS L++ Q R +H I+ L
Sbjct: 256 ISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTL 315
Query: 375 GNQLALDTAVVDLYVKCGSLMHARKVFDRMKQKNVISWSTMISGYGMHGHGREALFLFDQ 434
N + T+++ +Y KCG L A K+F+ MK+K+V++W+ MISGY HG+ +AL LF +
Sbjct: 316 CNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFRE 375
Query: 435 M-KALIKPDHITFVSVLSACSHAGLIDEGWECFNSMLRDFGVAPRPEHYACMVDMLGRAG 493
M I+PD ITFV+VL AC+HAGL++ G F SM+RD+ V P+P+HY CMVD+LGRAG
Sbjct: 376 MIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAG 435
Query: 494 KLNEAREFIERMPIRPDAGVWGSLLGACRIHSNVELAEMAAKALFDLDAENPGRYVILSN 553
KL EA + I MP RP A V+G+LLGACR+H NVELAE AA+ L L+++N YV L+N
Sbjct: 436 KLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEKLLQLNSQNAAGYVQLAN 495
Query: 554 IYASSGKRIEANRIRALMKRRGVKKITGHTVIEIKNKVHTFVAGDRSQPQTELTYSELAK 613
IYAS + + R+R MK V K+ G++ IEI+NKVH F + DR P+ + + +L +
Sbjct: 496 IYASKNRWEDVARVRKRMKESNVVKVPGYSWIEIRNKVHHFRSSDRIHPELDSIHKKLKE 555
Query: 614 LMDRIRREGYTPDLNFPF---------------------VFGLLNSGPGSAIRIKKNLRV 652
L +++ GY P+L F FG + GS I++ KNLR+
Sbjct: 556 LEKKMKLAGYKPELEFALHNVEEEQKEKLLLWHSEKLAVAFGCIKLPQGSQIQVFKNLRI 615
Query: 653 CGDCHTATKFISKVTGREIIVRDAHRFHHFKDGTCSCGDYW 693
CGDCH A KFIS++ REIIVRD RFHHFKDG+CSCGDYW
Sbjct: 616 CGDCHKAIKFISEIEKREIIVRDTTRFHHFKDGSCSCGDYW 656
>sp|O49619|PP350_ARATH Pentatricopeptide repeat-containing protein At4g35130,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H27 PE=3
SV=1
Length = 804
Score = 417 bits (1071), Expect = e-115, Method: Compositional matrix adjust.
Identities = 221/682 (32%), Positives = 370/682 (54%), Gaps = 29/682 (4%)
Query: 37 QTEFFDPETCISSIKQCQTLQSLKTLHAFTLRSRFYHHHDLFLVTNLVSQYASLGSISHA 96
+ + F I S+ +L+ K +HA ++ F D+++ +L+S Y LG A
Sbjct: 127 KADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVS--DVYVCNSLISLYMKLGCAWDA 184
Query: 97 FSLFSSVSDSCDLFLWNVMIRAFVDNRQFDRSLQLYAQMRELDINPDKFTFPFVLKACGY 156
+F + + D+ WN MI ++ SL L+ +M + PD+F+ L AC +
Sbjct: 185 EKVFEEMPER-DIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSH 243
Query: 157 LRDIEFGVKVHKDAVDSGYWS-DVFVGNSLIAMYGKCGRVDVCRQLFDEMPERNVVTWSS 215
+ + G ++H AV S + DV V S++ MY K G V ++F+ M +RN+V W+
Sbjct: 244 VYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNV 303
Query: 216 LTGAYAQNGCYEEGLLLFKRMMDE-GIRPNRVVILNAMACVRKVSEADDVCRVVVDNGLD 274
+ G YA+NG + L F++M ++ G++P+ + +N + + E + + G
Sbjct: 304 MIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLP-ASAILEGRTIHGYAMRRGFL 362
Query: 275 LDQSLQNAAMVMYARCGRMDMARRFFEGILNKDLVSWTSMIEAYAQADLPLEALEVYRQM 334
L+ A + MY CG++ A F+ + K+++SW S+I AY Q ALE+++++
Sbjct: 363 PHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQEL 422
Query: 335 ILRRVLPDSVTFLGVIRACSSLASFQQARTVHGIIIHCFLGNQLALDTAVVDLYVKCGSL 394
++PDS T ++ A + S + R +H I+ + + ++V +Y CG L
Sbjct: 423 WDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDL 482
Query: 395 MHARKVFDRMKQKNVISWSTMISGYGMHGHGREALFLFDQMKA-LIKPDHITFVSVLSAC 453
ARK F+ + K+V+SW+++I Y +HG GR +++LF +M A + P+ TF S+L+AC
Sbjct: 483 EDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAAC 542
Query: 454 SHAGLIDEGWECFNSMLRDFGVAPRPEHYACMVDMLGRAGKLNEAREFIERMPIRPDAGV 513
S +G++DEGWE F SM R++G+ P EHY CM+D++GR G + A+ F+E MP P A +
Sbjct: 543 SISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTARI 602
Query: 514 WGSLLGACRIHSNVELAEMAAKALFDLDAENPGRYVILSNIYASSGKRIEANRIRALMKR 573
WGSLL A R H ++ +AE AA+ +F ++ +N G YV+L N+YA +G+ + NRI+ LM+
Sbjct: 603 WGSLLNASRNHKDITIAEFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWEDVNRIKLLMES 662
Query: 574 RGVKKITGHTVIEIKNKVHTFVAGDRSQPQTELTYSEL-------------AKLMDRIRR 620
+G+ + + + +E K K H F GDRS T Y L + R+R
Sbjct: 663 KGISRTSSRSTVEAKGKSHVFTNGDRSHVATNKIYEVLDVVSRMVGEEDIYVHCVSRLRP 722
Query: 621 EGYTP---------DLNFPFVFGLLNSGPGSAIRIKKNLRVCGDCHTATKFISKVTGREI 671
E + FGL+++ G + ++ N R+C CH + S++T REI
Sbjct: 723 ETLVKSRSNSPRRHSVRLATCFGLISTETGRRVTVRNNTRICRKCHEFLEKASRLTRREI 782
Query: 672 IVRDAHRFHHFKDGTCSCGDYW 693
+V D+ FHHF +G CSCG+YW
Sbjct: 783 VVGDSKIFHHFSNGRCSCGNYW 804
Score = 219 bits (557), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 135/435 (31%), Positives = 231/435 (53%), Gaps = 13/435 (2%)
Query: 96 AFSLFSSVSDSCDLFLWNVMIRAFVDNRQFDRSLQLYAQMRELDINPDKFTFPFVLKACG 155
A LF ++ + D FLWNVMI+ F + ++Q Y++M + D FT+PFV+K+
Sbjct: 83 ALQLFDEMNKA-DAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVA 141
Query: 156 YLRDIEFGVKVHKDAVDSGYWSDVFVGNSLIAMYGKCGRVDVCRQLFDEMPERNVVTWSS 215
+ +E G K+H + G+ SDV+V NSLI++Y K G ++F+EMPER++V+W+S
Sbjct: 142 GISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNS 201
Query: 216 LTGAYAQNGCYEEGLLLFKRMMDEGIRPNRVVILNAM-ACVRKVSE---ADDVCRVVVDN 271
+ Y G L+LFK M+ G +P+R ++A+ AC S + C V
Sbjct: 202 MISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSR 261
Query: 272 GLDLDQSLQNAAMVMYARCGRMDMARRFFEGILNKDLVSWTSMIEAYAQADLPLEALEVY 331
D + + + MY++ G + A R F G++ +++V+W MI YA+ +A +
Sbjct: 262 IETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCF 321
Query: 332 RQMILRRVL-PDSVTFLGVIRACSSLASFQQARTVHGIIIHCFLGNQLALDTAVVDLYVK 390
++M + L PD +T + ++ A + L + RT+HG + + L+TA++D+Y +
Sbjct: 322 QKMSEQNGLQPDVITSINLLPASAIL----EGRTIHGYAMRRGFLPHMVLETALIDMYGE 377
Query: 391 CGSLMHARKVFDRMKQKNVISWSTMISGYGMHGHGREALFLFDQM-KALIKPDHITFVSV 449
CG L A +FDRM +KNVISW+++I+ Y +G AL LF ++ + + PD T S+
Sbjct: 378 CGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASI 437
Query: 450 LSACSHAGLIDEGWECFNSMLRDFGVAPRPEHYACMVDMLGRAGKLNEAREFIERMPIRP 509
L A + + + EG E +++ +V M G L +AR+ + ++
Sbjct: 438 LPAYAESLSLSEGREIHAYIVKS-RYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLK- 495
Query: 510 DAGVWGSLLGACRIH 524
D W S++ A +H
Sbjct: 496 DVVSWNSIIMAYAVH 510
>sp|Q9SZT8|PP354_ARATH Pentatricopeptide repeat-containing protein At4g37380,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H48 PE=3
SV=1
Length = 632
Score = 416 bits (1070), Expect = e-115, Method: Compositional matrix adjust.
Identities = 239/700 (34%), Positives = 367/700 (52%), Gaps = 107/700 (15%)
Query: 28 FFSASSPQQQ-----TEFF---DPETCISSIKQCQTLQSLKTLHAFTLRSRFYHHHDLFL 79
+ S PQ Q T F PE I + Q++ + +HA LR H +
Sbjct: 6 LLATSLPQNQLSTTATARFRLPPPEKLAVLIDKSQSVDEVLQIHAAILRHNLLLH-PRYP 64
Query: 80 VTNLV--SQYASLGSISHAFSLFSSVSDSCDLFLWNVMIRAFVDNRQFDRSLQLYAQMRE 137
V NL YAS G I H+ +LF D DLFL+ I N D++ LY Q+
Sbjct: 65 VLNLKLHRAYASHGKIRHSLALFHQTIDP-DLFLFTAAINTASINGLKDQAFLLYVQLLS 123
Query: 138 LDINPDKFTFPFVLKACGYLRDIEFGVKVHKDAVDSGYWSDVFVGNSLIAMYGKCGRVDV 197
+INP++FTF +LK+C + G +H + G D +V G VDV
Sbjct: 124 SEINPNEFTFSSLLKSC----STKSGKLIHTHVLKFGLGIDPYVAT---------GLVDV 170
Query: 198 CRQLFDEMPERNVVTWSSLTGAYAQNGCYEEGLLLFKRMMDEGIRPNRVVILNAMACVRK 257
YA+ G +F RM P R ++ +
Sbjct: 171 ----------------------YAKGGDVVSAQKVFDRM------PERSLVSS------- 195
Query: 258 VSEADDVCRVVVDNGLDLDQSLQNAAMVMYARCGRMDMARRFFEGILNKDLVSWTSMIEA 317
A + YA+ G ++ AR F+ + +D+VSW MI+
Sbjct: 196 -----------------------TAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDG 232
Query: 318 YAQADLPLEALEVYRQMILR-RVLPDSVTFLGVIRACSSLASFQQARTVHGIIIHCFLGN 376
YAQ P +AL ++++++ + PD +T + + ACS + + + R +H + +
Sbjct: 233 YAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRL 292
Query: 377 QLALDTAVVDLYVKCGSLMHARKVFDRMKQKNVISWSTMISGYGMHGHGREALFLFDQMK 436
+ + T ++D+Y KCGSL A VF+ +K++++W+ MI+GY MHG+ ++AL LF++M+
Sbjct: 293 NVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQ 352
Query: 437 AL--IKPDHITFVSVLSACSHAGLIDEGWECFNSMLRDFGVAPRPEHYACMVDMLGRAGK 494
+ ++P ITF+ L AC+HAGL++EG F SM +++G+ P+ EHY C+V +LGRAG+
Sbjct: 353 GITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQ 412
Query: 495 LNEAREFIERMPIRPDAGVWGSLLGACRIHSNVELAEMAAKALFDLDAENPGRYVILSNI 554
L A E I+ M + D+ +W S+LG+C++H + L + A+ L L+ +N G YV+LSNI
Sbjct: 413 LKRAYETIKNMNMDADSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNI 472
Query: 555 YASSGKRIEANRIRALMKRRGVKKITGHTVIEIKNKVHTFVAGDRSQPQTELTYSELAKL 614
YAS G ++R LMK +G+ K G + IEI+NKVH F AGDR +++ Y+ L K+
Sbjct: 473 YASVGDYEGVAKVRNLMKEKGIVKEPGISTIEIENKVHEFRAGDREHSKSKEIYTMLRKI 532
Query: 615 MDRIRREGYTPDLN---------------------FPFVFGLLNSGPGSAIRIKKNLRVC 653
+RI+ GY P+ N +GL+++ PGS ++I KNLRVC
Sbjct: 533 SERIKSHGYVPNTNTVLQDLEETEKEQSLQVHSERLAIAYGLISTKPGSPLKIFKNLRVC 592
Query: 654 GDCHTATKFISKVTGREIIVRDAHRFHHFKDGTCSCGDYW 693
DCHT TK ISK+TGR+I++RD +RFHHF DG+CSCGD+W
Sbjct: 593 SDCHTVTKLISKITGRKIVMRDRNRFHHFTDGSCSCGDFW 632
>sp|Q9FXB9|PPR84_ARATH Pentatricopeptide repeat-containing protein At1g56690,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H69 PE=2
SV=1
Length = 704
Score = 412 bits (1059), Expect = e-114, Method: Compositional matrix adjust.
Identities = 241/694 (34%), Positives = 366/694 (52%), Gaps = 75/694 (10%)
Query: 28 FFSASSPQQQTEFFDPETCISSIKQCQTLQSLKTLHAFTLRSR----FYHHHDLFLVTNL 83
+FS P++ + FD E ++ L S + + +R ++ T +
Sbjct: 58 YFSNGLPKEARQLFD-EMSERNVVSWNGLVSGYIKNRMIVEARNVFELMPERNVVSWTAM 116
Query: 84 VSQYASLGSISHAFSLFSSVSDSCDLFLWNVMIRAFVDNRQFDRSLQLYAQMRELDINPD 143
V Y G + A SLF + + ++ W VM +D+ + D++ +LY D+ P
Sbjct: 117 VKGYMQEGMVGEAESLFWRMPERNEVS-WTVMFGGLIDDGRIDKARKLY------DMMPV 169
Query: 144 KFTFPFVLKACGYLRDIEFGVKVHKDAVDSGYWSDVFVGNSLIAMYGKCGRVDVCRQLFD 203
K DV ++I + GRVD R +FD
Sbjct: 170 K---------------------------------DVVASTNMIGGLCREGRVDEARLIFD 196
Query: 204 EMPERNVVTWSSLTGAYAQNGCYEEGLLLFKRMMDEGIRPNRVVILNAMACVRKVSEADD 263
EM ERNVVTW+++ Y QN + LF+ +M E + +L ++ +A++
Sbjct: 197 EMRERNVVTWTTMITGYRQNNRVDVARKLFE-VMPEKTEVSWTSMLLGYTLSGRIEDAEE 255
Query: 264 VCRVVVDNGLDLDQSLQ-NAAMVMYARCGRMDMARRFFEGILNKDLVSWTSMIEAYAQAD 322
V + + + NA +V + G + ARR F+ + ++D +W MI+AY +
Sbjct: 256 FFEV-----MPMKPVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKG 310
Query: 323 LPLEALEVYRQMILRRVLPDSVTFLGVIRACSSLASFQQARTVHGIIIHCFLGNQLALDT 382
LEAL+++ QM + V P + + ++ C++LAS Q R VH ++ C + + + +
Sbjct: 311 FELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVAS 370
Query: 383 AVVDLYVKCGSLMHARKVFDRMKQKNVISWSTMISGYGMHGHGREALFLFDQMKAL-IKP 441
++ +YVKCG L+ A+ VFDR K++I W+++ISGY HG G EAL +F +M + P
Sbjct: 371 VLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMP 430
Query: 442 DHITFVSVLSACSHAGLIDEGWECFNSMLRDFGVAPRPEHYACMVDMLGRAGKLNEAREF 501
+ +T +++L+ACS+AG ++EG E F SM F V P EHY+C VDMLGRAG++++A E
Sbjct: 431 NKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMEL 490
Query: 502 IERMPIRPDAGVWGSLLGACRIHSNVELAEMAAKALFDLDAENPGRYVILSNIYASSGKR 561
IE M I+PDA VWG+LLGAC+ HS ++LAE+AAK LF+ + +N G YV+LS+I AS K
Sbjct: 491 IESMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFENEPDNAGTYVLLSSINASRSKW 550
Query: 562 IEANRIRALMKRRGVKKITGHTVIEIKNKVHTFV-AGDRSQPQTELTYSELAKLMDRIRR 620
+ +R M+ V K G + IE+ KVH F G ++ P+ + L K +R
Sbjct: 551 GDVAVVRKNMRTNNVSKFPGCSWIEVGKKVHMFTRGGIKNHPEQAMILMMLEKTDGLLRE 610
Query: 621 EGYTPDLN---------------------FPFVFGLLNSGPGSAIRIKKNLRVCGDCHTA 659
GY+PD + +GLL G IR+ KNLRVCGDCH A
Sbjct: 611 AGYSPDCSHVLHDVDEEEKVDSLSRHSERLAVAYGLLKLPEGVPIRVMKNLRVCGDCHAA 670
Query: 660 TKFISKVTGREIIVRDAHRFHHFKDGTCSCGDYW 693
K ISKVT REII+RDA+RFHHF +G CSC DYW
Sbjct: 671 IKLISKVTEREIILRDANRFHHFNNGECSCRDYW 704
Score = 91.3 bits (225), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/337 (24%), Positives = 150/337 (44%), Gaps = 57/337 (16%)
Query: 186 IAMYGKCGRVDVCRQLFDEMPERNVVTWSSLTGAYAQNGCYEEGLLLFKRMMDEGIRPNR 245
I+ + G+++ R+ FD + + + +W+S+ Y NG +E LF M +
Sbjct: 24 ISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERN----- 78
Query: 246 VVILNAMACVRKVSEADDVCRVVVDNGLDLDQSLQNAAMVMYARCGRMDMARRFFEGILN 305
VV NGL + ++N +V AR FE +
Sbjct: 79 ---------------------VVSWNGL-VSGYIKNRMIV---------EARNVFELMPE 107
Query: 306 KDLVSWTSMIEAYAQADLPLEALEVYRQMILRRVLPDSVTFLGVIRACSSLASFQQARTV 365
+++VSWT+M++ Y Q + EA ++ +M R + +V F G+I +AR +
Sbjct: 108 RNVVSWTAMVKGYMQEGMVGEAESLFWRMPERNEVSWTVMFGGLIDD----GRIDKARKL 163
Query: 366 HGIIIHCFLGNQLALDTAVVDLYVKCGSLMHARKVFDRMKQKNVISWSTMISGYGMHGHG 425
+ ++ + T ++ + G + AR +FD M+++NV++W+TMI+GY +
Sbjct: 164 YDMMPV----KDVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRV 219
Query: 426 REALFLFDQMKALIKPDHITFVSVLSACSHAGLIDEGWECFNSMLRDFGVAPRPEHYAC- 484
A LF+ M + +++ S+L + +G I++ E F M P AC
Sbjct: 220 DVARKLFEVMP---EKTEVSWTSMLLGYTLSGRIEDAEEFFEVM-------PMKPVIACN 269
Query: 485 -MVDMLGRAGKLNEAREFIERMPIRPDAGVWGSLLGA 520
M+ G G++++AR + M R D W ++ A
Sbjct: 270 AMIVGFGEVGEISKARRVFDLMEDR-DNATWRGMIKA 305
Score = 81.3 bits (199), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/318 (23%), Positives = 141/318 (44%), Gaps = 45/318 (14%)
Query: 288 ARCGRMDMARRFFEGILNKDLVSWTSMIEAYAQADLPLEALEVYRQMILRRVLPDSVTFL 347
+R G+++ AR+FF+ + K + SW S++ Y LP EA +++ +M R V V++
Sbjct: 28 SRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERNV----VSWN 83
Query: 348 GVIRACSSLASFQQARTVHGIIIHCFLGNQLALDTAVVDLYVKCGSLMHARKVFDRMKQK 407
G++ +AR V ++ + TA+V Y++ G + A +F RM ++
Sbjct: 84 GLVSGYIKNRMIVEARNVFELMPE----RNVVSWTAMVKGYMQEGMVGEAESLFWRMPER 139
Query: 408 NVISWSTMISGYGMHGHGREALFLFDQMKALIKPDHITFVSVLSACSHAGLIDEGWECFN 467
N +SW+ M G G +A L+D M D + +++ G +DE F+
Sbjct: 140 NEVSWTVMFGGLIDDGRIDKARKLYDMMPV---KDVVASTNMIGGLCREGRVDEARLIFD 196
Query: 468 SM------------------------LRDFGVAPRPEHYACMVDMLGR--AGKLNEAREF 501
M + F V P + +LG +G++ +A EF
Sbjct: 197 EMRERNVVTWTTMITGYRQNNRVDVARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEF 256
Query: 502 IERMPIRPDAGVWGSLLGACRIHSNVELAEMA-AKALFDL-DAENPGRYVILSNIYASSG 559
E MP++P ++G E+ E++ A+ +FDL + + + + Y G
Sbjct: 257 FEVMPMKPVIACNAMIVGFG------EVGEISKARRVFDLMEDRDNATWRGMIKAYERKG 310
Query: 560 KRIEANRIRALMKRRGVK 577
+EA + A M+++GV+
Sbjct: 311 FELEALDLFAQMQKQGVR 328
>sp|Q9S7F4|PP206_ARATH Putative pentatricopeptide repeat-containing protein At2g01510
OS=Arabidopsis thaliana GN=PCMP-H36 PE=3 SV=1
Length = 825
Score = 411 bits (1057), Expect = e-114, Method: Compositional matrix adjust.
Identities = 233/724 (32%), Positives = 379/724 (52%), Gaps = 39/724 (5%)
Query: 3 RVVVTQMVMQQKLTKFCHLRQQWRLF------FSASSPQQQTEFFDPETCISSIKQCQTL 56
R VVT ++ + H + ++LF S + P T C ++ Q
Sbjct: 108 RTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQ---- 163
Query: 57 QSLKTLHAFTLRSRFYHHHDLFLVTNLVSQYASLGSISHAFSLFSSVSDSCDLFLWNVMI 116
++ +HAF ++ F + L + L+ Y + + A LF + + D +N +I
Sbjct: 164 NAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEK-DSVTFNTLI 222
Query: 117 RAFVDNRQFDRSLQLYAQMRELDINPDKFTFPFVLKACGYLRDIEFGVKVHKDAVDSGYW 176
+ + + S+ L+ +MR+ P FTF VLKA L D G ++H +V +G+
Sbjct: 223 TGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFS 282
Query: 177 SDVFVGNSLIAMYGKCGRVDVCRQLFDEMPERNVVTWSSLTGAYAQNGCYEEGLLLFKRM 236
D VGN ++ Y K RV R LFDEMPE + V+++ + +Y+Q YE L F+ M
Sbjct: 283 RDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREM 342
Query: 237 MDEGI-RPNR--VVILNAMACVRKVSEADDV-CRVVVDNGLDLDQSLQNAAMVMYARCGR 292
G R N +L+ A + + + C+ ++ D + N+ + MYA+C
Sbjct: 343 QCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATA-DSILHVGNSLVDMYAKCEM 401
Query: 293 MDMARRFFEGILNKDLVSWTSMIEAYAQADLPLEALEVYRQMILRRVLPDSVTFLGVIRA 352
+ A F+ + + VSWT++I Y Q L L+++ +M + D TF V++A
Sbjct: 402 FEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKA 461
Query: 353 CSSLASFQQARTVHGIIIHCFLGNQLALDTAVVDLYVKCGSLMHARKVFDRMKQKNVISW 412
+S AS + +H II + + +VD+Y KCGS+ A +VF+ M +N +SW
Sbjct: 462 SASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSW 521
Query: 413 STMISGYGMHGHGREALFLFDQM-KALIKPDHITFVSVLSACSHAGLIDEGWECFNSMLR 471
+ +IS + +G G A+ F +M ++ ++PD ++ + VL+ACSH G +++G E F +M
Sbjct: 522 NALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSP 581
Query: 472 DFGVAPRPEHYACMVDMLGRAGKLNEAREFIERMPIRPDAGVWGSLLGACRIHSNVELAE 531
+G+ P+ +HYACM+D+LGR G+ EA + ++ MP PD +W S+L ACRIH N LAE
Sbjct: 582 IYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAE 641
Query: 532 MAAKALFDLDA-ENPGRYVILSNIYASSGKRIEANRIRALMKRRGVKKITGHTVIEIKNK 590
AA+ LF ++ + YV +SNIYA++G+ + ++ M+ RG+KK+ ++ +E+ +K
Sbjct: 642 RAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYSWVEVNHK 701
Query: 591 VHTFVAGDRSQPQTELTYSELAKLMDRIRREGYTPDLN---------------------F 629
+H F + D++ P + ++ +L I REGY PD +
Sbjct: 702 IHVFSSNDQTHPNGDEIVRKINELTAEIEREGYKPDTSSVVQDVDEQMKIESLKYHSERL 761
Query: 630 PFVFGLLNSGPGSAIRIKKNLRVCGDCHTATKFISKVTGREIIVRDAHRFHHFKDGTCSC 689
F L+++ G I + KNLR C DCH A K ISK+ REI VRD RFHHF +G CSC
Sbjct: 762 AVAFALISTPEGCPIVVMKNLRACRDCHAAIKLISKIVKREITVRDTSRFHHFSEGVCSC 821
Query: 690 GDYW 693
GDYW
Sbjct: 822 GDYW 825
Score = 120 bits (301), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 87/347 (25%), Positives = 154/347 (44%), Gaps = 12/347 (3%)
Query: 183 NSLIAMYGKCGRVDVCRQLFDEMPERNVVTWSSLTGAYAQNGCYEEGLLLFKRMMDEG-- 240
N++I+ + K G V R LFD MP+R VVTW+ L G YA+N ++E LF++M
Sbjct: 83 NTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSC 142
Query: 241 IRPNRVVILNAMACVRKVSEADDVCRV---VVDNGLDLDQ--SLQNAAMVMYARCGRMDM 295
P+ V + + V +V V G D + ++ N + Y R+D+
Sbjct: 143 TLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDL 202
Query: 296 ARRFFEGILNKDLVSWTSMIEAYAQADLPLEALEVYRQMILRRVLPDSVTFLGVIRACSS 355
A FE I KD V++ ++I Y + L E++ ++ +M P TF GV++A
Sbjct: 203 ACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVG 262
Query: 356 LASFQQARTVHGIIIHCFLGNQLALDTAVVDLYVKCGSLMHARKVFDRMKQKNVISWSTM 415
L F + +H + + ++ ++D Y K ++ R +FD M + + +S++ +
Sbjct: 263 LHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVV 322
Query: 416 ISGYGMHGHGREALFLFDQMKAL-IKPDHITFVSVLSACSHAGLIDEGWECFNSMLRDFG 474
IS Y +L F +M+ + + F ++LS ++ + G + L
Sbjct: 323 ISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQAL--LA 380
Query: 475 VAPRPEHYA-CMVDMLGRAGKLNEAREFIERMPIRPDAGVWGSLLGA 520
A H +VDM + EA + +P R W +L+
Sbjct: 381 TADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVS-WTALISG 426
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 54/136 (39%), Gaps = 34/136 (25%)
Query: 355 SLASFQQARTVHGIIIHCFLGNQLALDTAVVDLYVKCGSLMHARKVFDRMKQKNVISWST 414
S A+F R V II +V+ ++ G + ARKV+D M KN +S +T
Sbjct: 25 SPATFLDTRRVDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNT 84
Query: 415 MISG-------------------------------YGMHGHGREALFLFDQM---KALIK 440
MISG Y + H EA LF QM +
Sbjct: 85 MISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTL 144
Query: 441 PDHITFVSVLSACSHA 456
PDH+TF ++L C+ A
Sbjct: 145 PDHVTFTTLLPGCNDA 160
>sp|P0C898|PP232_ARATH Putative pentatricopeptide repeat-containing protein At3g15130
OS=Arabidopsis thaliana GN=PCMP-H86 PE=3 SV=1
Length = 689
Score = 411 bits (1057), Expect = e-114, Method: Compositional matrix adjust.
Identities = 228/668 (34%), Positives = 368/668 (55%), Gaps = 42/668 (6%)
Query: 62 LHAFTLRSRFYHHHDLFLVTN--LVSQYASLGSISHAFSLFSSVSDSCDLFLWNVMIRAF 119
+H + L+S L L+T+ L+ Y A+ +F S+ + ++ W+ ++
Sbjct: 28 VHCYLLKS----GSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPER-NVVSWSALMSGH 82
Query: 120 VDNRQFDRSLQLYAQMRELDINPDKFTFPFVLKACGYLRDIEFGVKVHKDAVDSGYWSDV 179
V N SL L+++M I P++FTF LKACG L +E G+++H + G+ V
Sbjct: 83 VLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMV 142
Query: 180 FVGNSLIAMYGKCGRVDVCRQLFDEMPERNVVTWSSLTGAYAQNGCYEEGLLLFKRMMDE 239
VGNSL+ MY KCGR++ ++F + +R++++W+++ + G + L F M +
Sbjct: 143 EVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEA 202
Query: 240 GI--RPNRVVI---LNAMACVRKVSEADDVCRVVVDNGLDLDQS--LQNAAMVMYARCGR 292
I RP+ + L A + + + +V +G S + + + +Y +CG
Sbjct: 203 NIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGY 262
Query: 293 MDMARRFFEGILNKDLVSWTSMIEAYAQADLPLEALEVYRQMILRRVLPDSVTFLGVIRA 352
+ AR+ F+ I K ++SW+S+I YAQ +EA+ +++++ DS +I
Sbjct: 263 LFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGV 322
Query: 353 CSSLASFQQARTVHGIIIHCFLGNQLALDTAVVDLYVKCGSLMHARKVFDRMKQKNVISW 412
+ A +Q + + + + G + ++ +VVD+Y+KCG + A K F M+ K+VISW
Sbjct: 323 FADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISW 382
Query: 413 STMISGYGMHGHGREALFLFDQM-KALIKPDHITFVSVLSACSHAGLIDEGWECFNSMLR 471
+ +I+GYG HG G++++ +F +M + I+PD + +++VLSACSH+G+I EG E F+ +L
Sbjct: 383 TVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLE 442
Query: 472 DFGVAPRPEHYACMVDMLGRAGKLNEAREFIERMPIRPDAGVWGSLLGACRIHSNVELAE 531
G+ PR EHYAC+VD+LGRAG+L EA+ I+ MPI+P+ G+W +LL CR+H ++EL +
Sbjct: 443 THGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGK 502
Query: 532 MAAKALFDLDAENPGRYVILSNIYASSGKRIEANRIRALMKRRGVKKITGHTVIEIKNKV 591
K L +DA+NP YV++SN+Y +G E R L +G+KK G + +EI+ +V
Sbjct: 503 EVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNARELGNIKGLKKEAGMSWVEIEREV 562
Query: 592 HTFVAGDRSQPQTELTYSELAKLMDRIRRE-GYTPDL----------------------- 627
H F +G+ S P T + L + R+R E GY L
Sbjct: 563 HFFRSGEDSHPLTPVIQETLKEAERRLREELGYVYGLKHELHDIDDESKEENLRAHSEKL 622
Query: 628 --NFPFVFGLLNSGPGSAIRIKKNLRVCGDCHTATKFISKVTGREIIVRDAHRFHHFKDG 685
G LN G IR+ KNLRVC DCH K +SK+T +VRDA RFH F+DG
Sbjct: 623 AIGLALATGGLNQ-KGKTIRVFKNLRVCVDCHEFIKGLSKITKIAYVVRDAVRFHSFEDG 681
Query: 686 TCSCGDYW 693
CSCGDYW
Sbjct: 682 CCSCGDYW 689
Score = 174 bits (440), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 108/369 (29%), Positives = 185/369 (50%), Gaps = 13/369 (3%)
Query: 150 VLKACGYLRDIEFGVKVHKDAVDSGYWSDVFVGNSLIAMYGKCGRVDVCRQLFDEMPERN 209
+L+ C + G +VH + SG ++ N LI MY KC + ++FD MPERN
Sbjct: 12 ILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPERN 71
Query: 210 VVTWSSLTGAYAQNGCYEEGLLLFKRMMDEGIRPNRVVI---LNAMACVRKVSEADDVCR 266
VV+WS+L + NG + L LF M +GI PN L A + + + +
Sbjct: 72 VVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHG 131
Query: 267 VVVDNGLDLDQSLQNAAMVMYARCGRMDMARRFFEGILNKDLVSWTSMIEAYAQADLPLE 326
+ G ++ + N+ + MY++CGR++ A + F I+++ L+SW +MI + A +
Sbjct: 132 FCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSK 191
Query: 327 ALEVYRQMILRRVL--PDSVTFLGVIRACSSLASFQQARTVHGIII----HCFLGNQLAL 380
AL+ + M + PD T +++ACSS + +HG ++ HC + +
Sbjct: 192 ALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHC--PSSATI 249
Query: 381 DTAVVDLYVKCGSLMHARKVFDRMKQKNVISWSTMISGYGMHGHGREALFLFDQMKAL-I 439
++VDLYVKCG L ARK FD++K+K +ISWS++I GY G EA+ LF +++ L
Sbjct: 250 TGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNS 309
Query: 440 KPDHITFVSVLSACSHAGLIDEGWECFNSMLRDFGVAPRPEHYACMVDMLGRAGKLNEAR 499
+ D S++ + L+ +G + ++ +VDM + G ++EA
Sbjct: 310 QIDSFALSSIIGVFADFALLRQGKQ-MQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAE 368
Query: 500 EFIERMPIR 508
+ M ++
Sbjct: 369 KCFAEMQLK 377
Score = 115 bits (289), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 143/284 (50%), Gaps = 11/284 (3%)
Query: 242 RPNRVVILNAMACVRK--VSEADDVCRVVVDNGLDLDQSLQNAAMVMYARCGRMDMARRF 299
R N V IL C RK + V ++ +G L+ N + MY +C MA +
Sbjct: 6 RQNLVSILRV--CTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKV 63
Query: 300 FEGILNKDLVSWTSMIEAYA-QADLPLEALEVYRQMILRRVLPDSVTFLGVIRACSSLAS 358
F+ + +++VSW++++ + DL +L ++ +M + + P+ TF ++AC L +
Sbjct: 64 FDSMPERNVVSWSALMSGHVLNGDLK-GSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNA 122
Query: 359 FQQARTVHGIIIHCFLGNQLALDTAVVDLYVKCGSLMHARKVFDRMKQKNVISWSTMISG 418
++ +HG + + + ++VD+Y KCG + A KVF R+ +++ISW+ MI+G
Sbjct: 123 LEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAG 182
Query: 419 YGMHGHGREALFLFDQMK-ALIK--PDHITFVSVLSACSHAGLIDEGWECFNSMLRD-FG 474
+ G+G +AL F M+ A IK PD T S+L ACS G+I G + ++R F
Sbjct: 183 FVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFH 242
Query: 475 VAPRPEHYACMVDMLGRAGKLNEAREFIERMPIRPDAGVWGSLL 518
+VD+ + G L AR+ +++ + W SL+
Sbjct: 243 CPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMIS-WSSLI 285
>sp|Q9LYV3|PP377_ARATH Putative pentatricopeptide repeat-containing protein At5g13230,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H89 PE=3
SV=1
Length = 822
Score = 411 bits (1056), Expect = e-113, Method: Compositional matrix adjust.
Identities = 230/651 (35%), Positives = 354/651 (54%), Gaps = 29/651 (4%)
Query: 70 RFYHHHDLFLVTNLVSQYASLGSISHAFSLFSSVSDSCDLFLWNVMIRAFVDNRQFDRSL 129
+ + + F+ L++ Y+ GS+ A ++F + D+ +W ++ +V+N F+ SL
Sbjct: 174 KLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCK-DIVVWAGIVSCYVENGYFEDSL 232
Query: 130 QLYAQMRELDINPDKFTFPFVLKACGYLRDIEFGVKVHKDAVDSGYWSDVFVGNSLIAMY 189
+L + MR P+ +TF LKA L +F VH + + Y D VG L+ +Y
Sbjct: 233 KLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLY 292
Query: 190 GKCGRVDVCRQLFDEMPERNVVTWSSLTGAYAQNGCYEEGLLLFKRMMDEGIRPNRVV-- 247
+ G + ++F+EMP+ +VV WS + + QNG E + LF RM + + PN
Sbjct: 293 TQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLS 352
Query: 248 -ILNAMACVRKVSEADDVCRVVVDNGLDLDQSLQNAAMVMYARCGRMDMARRFFEGILNK 306
ILN A + + + +VV G DLD + NA + +YA+C +MD A + F + +K
Sbjct: 353 SILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSK 412
Query: 307 DLVSWTSMIEAYAQADLPLEALEVYRQMILRRVLPDSVTFLGVIRACSSLASFQQARTVH 366
+ VSW ++I Y +A ++R+ + +V VTF + AC+SLAS VH
Sbjct: 413 NEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVH 472
Query: 367 GIIIHCFLGNQLALDTAVVDLYVKCGSLMHARKVFDRMKQKNVISWSTMISGYGMHGHGR 426
G+ I ++A+ +++D+Y KCG + A+ VF+ M+ +V SW+ +ISGY HG GR
Sbjct: 473 GLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGR 532
Query: 427 EALFLFDQMKAL-IKPDHITFVSVLSACSHAGLIDEGWECFNSMLRDFGVAPRPEHYACM 485
+AL + D MK KP+ +TF+ VLS CS+AGLID+G ECF SM+RD G+ P EHY CM
Sbjct: 533 QALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCM 592
Query: 486 VDMLGRAGKLNEAREFIERMPIRPDAGVWGSLLGACRIHSNVELAEMAAKALFDLDAENP 545
V +LGR+G+L++A + IE +P P +W ++L A +N E A +A+ + ++ ++
Sbjct: 593 VRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARRSAEEILKINPKDE 652
Query: 546 GRYVILSNIYASSGKRIEANRIRALMKRRGVKKITGHTVIEIKNKVHTFVAGDRSQPQTE 605
YV++SN+YA + + IR MK GVKK G + IE + VH F G P +
Sbjct: 653 ATYVLVSNMYAGAKQWANVASIRKSMKEMGVKKEPGLSWIEHQGDVHYFSVGLSDHPDMK 712
Query: 606 LTYSELAKLMDRIRREGYTPDLN---------------------FPFVFGLLNSGPGSAI 644
L L L + R GY PD N +GL+ P S
Sbjct: 713 LINGMLEWLNMKATRAGYVPDRNAVLLDMDDEEKDKRLWVHSERLALAYGLVRM-PSSRN 771
Query: 645 R--IKKNLRVCGDCHTATKFISKVTGREIIVRDAHRFHHFKDGTCSCGDYW 693
R I KNLR+C DCH+A K IS + R++++RD +RFHHF G CSCGD+W
Sbjct: 772 RILIMKNLRICSDCHSAMKVISSIVQRDLVIRDMNRFHHFHAGVCSCGDHW 822
Score = 150 bits (379), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 116/455 (25%), Positives = 198/455 (43%), Gaps = 15/455 (3%)
Query: 76 DLFLVTNLVSQYASLGSISHAFSLFSSVSDSCDLFLWNVMIRAFVDNRQFDRSLQLYAQM 135
DLF L++ Y G A +LF + + NV + LY+++
Sbjct: 83 DLFATNILLNAYVKAGFDKDALNLFDEMPERN-----NVSFVTLAQGYACQDPIGLYSRL 137
Query: 136 -RE-LDINPDKFTFPFVLKACGYLRDIEFGVKVHKDAVDSGYWSDVFVGNSLIAMYGKCG 193
RE ++NP FT LK L E +H V GY S+ FVG +LI Y CG
Sbjct: 138 HREGHELNPHVFTS--FLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCG 195
Query: 194 RVDVCRQLFDEMPERNVVTWSSLTGAYAQNGCYEEGLLLFKRMMDEGIRPNRVVI---LN 250
VD R +F+ + +++V W+ + Y +NG +E+ L L M G PN L
Sbjct: 196 SVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALK 255
Query: 251 AMACVRKVSEADDVCRVVVDNGLDLDQSLQNAAMVMYARCGRMDMARRFFEGILNKDLVS 310
A + A V ++ LD + + +Y + G M A + F + D+V
Sbjct: 256 ASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVP 315
Query: 311 WTSMIEAYAQADLPLEALEVYRQMILRRVLPDSVTFLGVIRACSSLASFQQARTVHGIII 370
W+ MI + Q EA++++ +M V+P+ T ++ C+ +HG+++
Sbjct: 316 WSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVV 375
Query: 371 HCFLGNQLALDTAVVDLYVKCGSLMHARKVFDRMKQKNVISWSTMISGYGMHGHGREALF 430
+ + A++D+Y KC + A K+F + KN +SW+T+I GY G G +A
Sbjct: 376 KVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFS 435
Query: 431 LF-DQMKALIKPDHITFVSVLSACSHAGLIDEGWECFNSMLRDFGVAPRPEHYACMVDML 489
+F + ++ + +TF S L AC+ +D G + ++ A + ++DM
Sbjct: 436 MFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNN-AKKVAVSNSLIDMY 494
Query: 490 GRAGKLNEAREFIERMPIRPDAGVWGSLLGACRIH 524
+ G + A+ M D W +L+ H
Sbjct: 495 AKCGDIKFAQSVFNEMET-IDVASWNALISGYSTH 528
Score = 137 bits (344), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 94/317 (29%), Positives = 158/317 (49%), Gaps = 10/317 (3%)
Query: 143 DKFTFPFVLKACGYLRDIEFGVKVHKDAVDSGYWSDVFVGNSLIAMYGKCGRVDVCRQLF 202
D + +L+ C D +H D + G D+F N L+ Y K G LF
Sbjct: 48 DSHAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLF 107
Query: 203 DEMPERNVVTWSSLTGAYAQNGCYEEGLLLFKRMMDEGIRPNRVVILNAMACVRKVSEAD 262
DEMPERN V++ +L YA C ++ + L+ R+ EG N V + + + +A
Sbjct: 108 DEMPERNNVSFVTLAQGYA---C-QDPIGLYSRLHREGHELNPHVFTSFLKLFVSLDKA- 162
Query: 263 DVC----RVVVDNGLDLDQSLQNAAMVMYARCGRMDMARRFFEGILNKDLVSWTSMIEAY 318
++C +V G D + + A + Y+ CG +D AR FEGIL KD+V W ++ Y
Sbjct: 163 EICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCY 222
Query: 319 AQADLPLEALEVYRQMILRRVLPDSVTFLGVIRACSSLASFQQARTVHGIIIHCFLGNQL 378
+ ++L++ M + +P++ TF ++A L +F A+ VHG I+
Sbjct: 223 VENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDP 282
Query: 379 ALDTAVVDLYVKCGSLMHARKVFDRMKQKNVISWSTMISGYGMHGHGREALFLFDQMK-A 437
+ ++ LY + G + A KVF+ M + +V+ WS MI+ + +G EA+ LF +M+ A
Sbjct: 283 RVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREA 342
Query: 438 LIKPDHITFVSVLSACS 454
+ P+ T S+L+ C+
Sbjct: 343 FVVPNEFTLSSILNGCA 359
>sp|Q0WSH6|PP312_ARATH Pentatricopeptide repeat-containing protein At4g14850
OS=Arabidopsis thaliana GN=LOI1 PE=1 SV=1
Length = 684
Score = 410 bits (1055), Expect = e-113, Method: Compositional matrix adjust.
Identities = 232/645 (35%), Positives = 351/645 (54%), Gaps = 32/645 (4%)
Query: 78 FLVTNLVSQYASLGSISHAFSLFSSVSDSCDLFLWNVMIRAFVDNRQFDRSLQLYAQMRE 137
FL L++ Y+ L A L ++ + ++ W +I N F +L + +MR
Sbjct: 43 FLANYLINMYSKLDHPESA-RLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRR 101
Query: 138 LDINPDKFTFPFVLKACGYLRDIEFGVKVHKDAVDSGYWSDVFVGNSLIAMYGKCGRVDV 197
+ P+ FTFP KA LR G ++H AV G DVFVG S MY K D
Sbjct: 102 EGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDD 161
Query: 198 CRQLFDEMPERNVVTWSSLTGAYAQNGCYEEGLLLFKRMMDEGIRPNRVVI---LNAMAC 254
R+LFDE+PERN+ TW++ +G E + F PN + LNA +
Sbjct: 162 ARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSD 221
Query: 255 VRKVSEADDVCRVVVDNGLDLDQSLQNAAMVMYARCGRMDMARRFFEGILNKDLVSWTSM 314
++ + +V+ +G D D S+ N + Y +C ++ + F + K+ VSW S+
Sbjct: 222 WLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSL 281
Query: 315 IEAYAQADLPLEALEVYRQMILRRVLPDSVTFL--GVIRACSSLASFQQARTVHGIIIHC 372
+ AY Q +A +Y + R+ + ++ F+ V+ AC+ +A + R++H +
Sbjct: 282 VAAYVQNHEDEKASVLYLRS--RKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKA 339
Query: 373 FLGNQLALDTAVVDLYVKCGSLMHARKVFDRMKQKNVISWSTMISGYGMHGHGREALFLF 432
+ + + +A+VD+Y KCG + + + FD M +KN+++ +++I GY G AL LF
Sbjct: 340 CVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALF 399
Query: 433 DQMKAL---IKPDHITFVSVLSACSHAGLIDEGWECFNSMLRDFGVAPRPEHYACMVDML 489
++M P+++TFVS+LSACS AG ++ G + F+SM +G+ P EHY+C+VDML
Sbjct: 400 EEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDML 459
Query: 490 GRAGKLNEAREFIERMPIRPDAGVWGSLLGACRIHSNVELAEMAAKALFDLDAENPGRYV 549
GRAG + A EFI++MPI+P VWG+L ACR+H +L +AA+ LF LD ++ G +V
Sbjct: 460 GRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHV 519
Query: 550 ILSNIYASSGKRIEANRIRALMKRRGVKKITGHTVIEIKNKVHTFVAGDRSQPQTELTYS 609
+LSN +A++G+ EAN +R +K G+KK G++ I +KN+VH F A DRS + +
Sbjct: 520 LLSNTFAAAGRWAEANTVREELKGVGIKKGAGYSWITVKNQVHAFQAKDRSHILNKEIQT 579
Query: 610 ELAKLMDRIRREGYTPDL---------------------NFPFVFGLLNSGPGSAIRIKK 648
LAKL + + GY PDL FGLL+ IRI K
Sbjct: 580 TLAKLRNEMEAAGYKPDLKLSLYDLEEEEKAAEVSHHSEKLALAFGLLSLPLSVPIRITK 639
Query: 649 NLRVCGDCHTATKFISKVTGREIIVRDAHRFHHFKDGTCSCGDYW 693
NLR+CGDCH+ KF+S REIIVRD +RFH FKDG CSC DYW
Sbjct: 640 NLRICGDCHSFFKFVSGSVKREIIVRDNNRFHRFKDGICSCKDYW 684
>sp|Q9LUJ2|PP249_ARATH Pentatricopeptide repeat-containing protein At3g22690
OS=Arabidopsis thaliana GN=PCMP-H56 PE=2 SV=1
Length = 842
Score = 410 bits (1054), Expect = e-113, Method: Compositional matrix adjust.
Identities = 245/727 (33%), Positives = 381/727 (52%), Gaps = 67/727 (9%)
Query: 26 RLFFSASSPQQQTEFFDPETCISSIKQCQTLQSLKTLHAFTLRSRFYHHHDLFLVTNLVS 85
R+ S SP + T F C S + +Q +H ++ + DLF+ +LV
Sbjct: 124 RMMNSGISPDKYTFPFGLSACAKSRAKGNGIQ----IHGLIVK--MGYAKDLFVQNSLVH 177
Query: 86 QYASLGSISHAFSLFSSVSDSCDLFLWNVMIRAFVDNRQFDR-SLQLYAQM-RELDINPD 143
YA G + A +F +S+ ++ W MI + R F + ++ L+ +M R+ ++ P+
Sbjct: 178 FYAECGELDSARKVFDEMSER-NVVSWTSMICGYA-RRDFAKDAVDLFFRMVRDEEVTPN 235
Query: 144 KFTFPFVLKACGYLRDIEFGVKVHKDAVDSGYWSDVFVGNSLIAMYGKCGRVDVCRQLFD 203
T V+ AC L D+E G KV+ +SG + + ++L+ MY KC +DV ++LFD
Sbjct: 236 SVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFD 295
Query: 204 EMPERNVVTWSSLTGAYAQNGCYEEGLLLFKRMMDEGIRPNRVVILNAMAC---VRKVSE 260
E N+ +++ Y + G E L +F MMD G+RP+R+ +L+A++ +R +
Sbjct: 296 EYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILW 355
Query: 261 ADDVCRVVVDNGLDLDQSLQNAAMVMYARCGRMDMARRFFEGILNKDLVSWTSMIEAYA- 319
V+ NG + ++ NA + MY +C R D A R F+ + NK +V+W S++ Y
Sbjct: 356 GKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVE 415
Query: 320 ------------------------------QADLPLEALEVYRQMILRR-VLPDSVTFLG 348
Q L EA+EV+ M + V D VT +
Sbjct: 416 NGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMS 475
Query: 349 VIRACSSLASFQQARTVHGIIIHCFLGNQLALDTAVVDLYVKCGSLMHARKVFDRMKQKN 408
+ AC L + A+ ++ I + + L T +VD++ +CG A +F+ + ++
Sbjct: 476 IASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRD 535
Query: 409 VISWSTMISGYGMHGHGREALFLFDQM-KALIKPDHITFVSVLSACSHAGLIDEGWECFN 467
V +W+ I M G+ A+ LFD M + +KPD + FV L+ACSH GL+ +G E F
Sbjct: 536 VSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFY 595
Query: 468 SMLRDFGVAPRPEHYACMVDMLGRAGKLNEAREFIERMPIRPDAGVWGSLLGACRIHSNV 527
SML+ GV+P HY CMVD+LGRAG L EA + IE MP+ P+ +W SLL ACR+ NV
Sbjct: 596 SMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNV 655
Query: 528 ELAEMAAKALFDLDAENPGRYVILSNIYASSGKRIEANRIRALMKRRGVKKITGHTVIEI 587
E+A AA+ + L E G YV+LSN+YAS+G+ + ++R MK +G++K G + I+I
Sbjct: 656 EMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQI 715
Query: 588 KNKVHTFVAGDRSQPQTELTYSELAKLMDRIRREGYTPDLN------------------- 628
+ K H F +GD S P+ + L ++ R G+ PDL+
Sbjct: 716 RGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGHVPDLSNVLMDVDEKEKIFMLSRHS 775
Query: 629 --FPFVFGLLNSGPGSAIRIKKNLRVCGDCHTATKFISKVTGREIIVRDAHRFHHFKDGT 686
+GL++S G+ IRI KNLRVC DCH+ KF SKV REII+RD +RFH+ + G
Sbjct: 776 EKLAMAYGLISSNKGTTIRIVKNLRVCSDCHSFAKFASKVYNREIILRDNNRFHYIRQGK 835
Query: 687 CSCGDYW 693
CSCGD+W
Sbjct: 836 CSCGDFW 842
Score = 233 bits (593), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 147/504 (29%), Positives = 262/504 (51%), Gaps = 23/504 (4%)
Query: 31 ASSPQQQTEFFDPETCI----SSIKQCQTLQSLKTLHAFTLRSRFYHHHDLFLVTNLVSQ 86
A++ + + C SS+K C+T+ LK H + +D+ +T LV++
Sbjct: 16 ATTTTTKPSLLNQSKCTKATPSSLKNCKTIDELKMFHRSLTKQGL--DNDVSTITKLVAR 73
Query: 87 YASLG---SISHAFSLFSSVSDSCDLFLWNVMIRAFVDNRQFDRSLQLYAQMRELDINPD 143
LG S+S A +F + F++N +IR + + + ++ L+ +M I+PD
Sbjct: 74 SCELGTRESLSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPD 133
Query: 144 KFTFPFVLKACGYLRDIEFGVKVHKDAVDSGYWSDVFVGNSLIAMYGKCGRVDVCRQLFD 203
K+TFPF L AC R G+++H V GY D+FV NSL+ Y +CG +D R++FD
Sbjct: 134 KYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFD 193
Query: 204 EMPERNVVTWSSLTGAYAQNGCYEEGLLLFKRMM-DEGIRPNRVV---ILNAMACVRKVS 259
EM ERNVV+W+S+ YA+ ++ + LF RM+ DE + PN V +++A A + +
Sbjct: 194 EMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLE 253
Query: 260 EADDVCRVVVDNGLDLDQSLQNAAMVMYARCGRMDMARRFFE--GILNKDLVSWTSMIEA 317
+ V + ++G++++ + +A + MY +C +D+A+R F+ G N DL + +M
Sbjct: 254 TGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCN--AMASN 311
Query: 318 YAQADLPLEALEVYRQMILRRVLPDSVTFLGVIRACSSLASFQQARTVHGIIIHCFLGNQ 377
Y + L EAL V+ M+ V PD ++ L I +CS L + ++ HG ++ +
Sbjct: 312 YVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESW 371
Query: 378 LALDTAVVDLYVKCGSLMHARKVFDRMKQKNVISWSTMISGYGMHGHGREALFLFDQMKA 437
+ A++D+Y+KC A ++FDRM K V++W+++++GY +G A F+ M
Sbjct: 372 DNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMP- 430
Query: 438 LIKPDHITFVSVLSACSHAGLIDEGWECFNSMLRDFGVAPRPEHYACMVDMLGRAGKLNE 497
+ + +++ +++S L +E E F SM GV + G G L+
Sbjct: 431 --EKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDL 488
Query: 498 AR---EFIERMPIRPDAGVWGSLL 518
A+ +IE+ I+ D + +L+
Sbjct: 489 AKWIYYYIEKNGIQLDVRLGTTLV 512
>sp|Q9STE1|PP333_ARATH Pentatricopeptide repeat-containing protein At4g21300
OS=Arabidopsis thaliana GN=PCMP-E36 PE=3 SV=1
Length = 857
Score = 408 bits (1049), Expect = e-113, Method: Compositional matrix adjust.
Identities = 204/556 (36%), Positives = 329/556 (59%), Gaps = 6/556 (1%)
Query: 81 TNLVSQYASLGSISHAFSLFSSVSDSCDLFLWNVMIRAFVDNRQFDRSLQLYAQMRELDI 140
+L+S Y+ G A LF +S + D WN MI +V + + SL + +M +
Sbjct: 278 NSLLSMYSKCGRFDDASKLFRMMSRA-DTVTWNCMISGYVQSGLMEESLTFFYEMISSGV 336
Query: 141 NPDKFTFPFVLKACGYLRDIEFGVKVHKDAVDSGYWSDVFVGNSLIAMYGKCGRVDVCRQ 200
PD TF +L + ++E+ ++H + D+F+ ++LI Y KC V + +
Sbjct: 337 LPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQN 396
Query: 201 LFDEMPERNVVTWSSLTGAYAQNGCYEEGLLLFKRMMDEGIRPNRVV---ILNAMACVRK 257
+F + +VV ++++ Y NG Y + L +F+ ++ I PN + IL + +
Sbjct: 397 IFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLA 456
Query: 258 VSEADDVCRVVVDNGLDLDQSLQNAAMVMYARCGRMDMARRFFEGILNKDLVSWTSMIEA 317
+ ++ ++ G D ++ A + MYA+CGRM++A FE + +D+VSW SMI
Sbjct: 457 LKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITR 516
Query: 318 YAQADLPLEALEVYRQMILRRVLPDSVTFLGVIRACSSLASFQQARTVHGIIIHCFLGNQ 377
AQ+D P A++++RQM + + D V+ + AC++L S + +HG +I L +
Sbjct: 517 CAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASD 576
Query: 378 LALDTAVVDLYVKCGSLMHARKVFDRMKQKNVISWSTMISGYGMHGHGREALFLFDQM-- 435
+ ++ ++D+Y KCG+L A VF MK+KN++SW+++I+ G HG +++L LF +M
Sbjct: 577 VYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVE 636
Query: 436 KALIKPDHITFVSVLSACSHAGLIDEGWECFNSMLRDFGVAPRPEHYACMVDMLGRAGKL 495
K+ I+PD ITF+ ++S+C H G +DEG F SM D+G+ P+ EHYAC+VD+ GRAG+L
Sbjct: 637 KSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRL 696
Query: 496 NEAREFIERMPIRPDAGVWGSLLGACRIHSNVELAEMAAKALFDLDAENPGRYVILSNIY 555
EA E ++ MP PDAGVWG+LLGACR+H NVELAE+A+ L DLD N G YV++SN +
Sbjct: 697 TEAYETVKSMPFPPDAGVWGTLLGACRLHKNVELAEVASSKLMDLDPSNSGYYVLISNAH 756
Query: 556 ASSGKRIEANRIRALMKRRGVKKITGHTVIEIKNKVHTFVAGDRSQPQTELTYSELAKLM 615
A++ + ++R+LMK R V+KI G++ IEI + H FV+GD + P++ YS L L+
Sbjct: 757 ANAREWESVTKVRSLMKEREVQKIPGYSWIEINKRTHLFVSGDVNHPESSHIYSLLNSLL 816
Query: 616 DRIRREGYTPDLNFPF 631
+R EGY P P
Sbjct: 817 GELRLEGYIPQPYLPL 832
Score = 205 bits (521), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 139/481 (28%), Positives = 242/481 (50%), Gaps = 11/481 (2%)
Query: 56 LQSLKTLHAFTLRSRFYHHHDLFLVTNLVSQYASLGSISHAFSLFSSVS-DSCDLFLWNV 114
L+ K +HAF + + D + ++ YA GS S +F + + WN
Sbjct: 51 LRQGKQVHAFLIVNSI--SGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRRSSIRPWNS 108
Query: 115 MIRAFVDNRQFDRSLQLYAQMRELDINPDKFTFPFVLKACGYLRDIEFGVKVHKDAVDS- 173
+I +FV N +++L Y +M ++PD TFP ++KAC L++ + G+ D V S
Sbjct: 109 IISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFK-GIDFLSDTVSSL 167
Query: 174 GYWSDVFVGNSLIAMYGKCGRVDVCRQLFDEMPERNVVTWSSLTGAYAQNGCYEEGLLLF 233
G + FV +SLI Y + G++DV +LFD + +++ V W+ + YA+ G + + F
Sbjct: 168 GMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGF 227
Query: 234 KRMMDEGIRPNRVV---ILNAMACVRKVSEADDVCRVVVDNGLDLDQSLQNAAMVMYARC 290
M + I PN V +L+ A + + +VV +G+D + S++N+ + MY++C
Sbjct: 228 SVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKC 287
Query: 291 GRMDMARRFFEGILNKDLVSWTSMIEAYAQADLPLEALEVYRQMILRRVLPDSVTFLGVI 350
GR D A + F + D V+W MI Y Q+ L E+L + +MI VLPD++TF ++
Sbjct: 288 GRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLL 347
Query: 351 RACSSLASFQQARTVHGIIIHCFLGNQLALDTAVVDLYVKCGSLMHARKVFDRMKQKNVI 410
+ S + + + +H I+ + + L +A++D Y KC + A+ +F + +V+
Sbjct: 348 PSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVV 407
Query: 411 SWSTMISGYGMHGHGREALFLFDQM-KALIKPDHITFVSVLSACSHAGLIDEGWECFNSM 469
++ MISGY +G ++L +F + K I P+ IT VS+L + G E +
Sbjct: 408 VFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFI 467
Query: 470 LRDFGVAPRPEHYACMVDMLGRAGKLNEAREFIERMPIRPDAGVWGSLLGACRIHSNVEL 529
++ G R ++DM + G++N A E ER+ R D W S++ C N
Sbjct: 468 IKK-GFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKR-DIVSWNSMITRCAQSDNPSA 525
Query: 530 A 530
A
Sbjct: 526 A 526
Score = 133 bits (334), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 81/337 (24%), Positives = 167/337 (49%), Gaps = 9/337 (2%)
Query: 125 FDRSLQLYAQMRELDIN-PDKFTFPFVLKACGYLRDIEFGVKVHKDAVDSGYWSDVFVGN 183
+ +SL L R L+ P + + +L+AC + G +VH + + D +
Sbjct: 17 YKKSLPLRNSSRFLEETIPRRLSL--LLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDE 74
Query: 184 SLIAMYGKCGRVDVCRQLFDEMPER--NVVTWSSLTGAYAQNGCYEEGLLLFKRMMDEGI 241
++ MY CG C ++F + R ++ W+S+ ++ +NG + L + +M+ G+
Sbjct: 75 RILGMYAMCGSFSDCGKMFYRLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGV 134
Query: 242 RPNRVV---ILNAMACVRKVSEADDVCRVVVDNGLDLDQSLQNAAMVMYARCGRMDMARR 298
P+ ++ A ++ D + V G+D ++ + ++ + Y G++D+ +
Sbjct: 135 SPDVSTFPCLVKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSK 194
Query: 299 FFEGILNKDLVSWTSMIEAYAQADLPLEALEVYRQMILRRVLPDSVTFLGVIRACSSLAS 358
F+ +L KD V W M+ YA+ ++ + M + ++ P++VTF V+ C+S
Sbjct: 195 LFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLL 254
Query: 359 FQQARTVHGIIIHCFLGNQLALDTAVVDLYVKCGSLMHARKVFDRMKQKNVISWSTMISG 418
+HG+++ + + ++ +++ +Y KCG A K+F M + + ++W+ MISG
Sbjct: 255 IDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISG 314
Query: 419 YGMHGHGREAL-FLFDQMKALIKPDHITFVSVLSACS 454
Y G E+L F ++ + + + PD ITF S+L + S
Sbjct: 315 YVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVS 351
Score = 92.4 bits (228), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 139/293 (47%), Gaps = 13/293 (4%)
Query: 235 RMMDEGIRPNRVVILNAMACVRKVSEADDVCRVVVDNGLDLDQSLQNAAMVMYARCGRM- 293
R ++E I ++L A + + + V ++ N + D + MYA CG
Sbjct: 28 RFLEETIPRRLSLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFS 87
Query: 294 DMARRFFEGILNKDLV-SWTSMIEAYAQADLPLEALEVYRQMILRRVLPDSVTFLGVIRA 352
D + F+ L + + W S+I ++ + L +AL Y +M+ V PD TF +++A
Sbjct: 88 DCGKMFYRLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKA 147
Query: 353 CSSLASFQQ----ARTVHGIIIHCFLGNQLALDTAVVDLYVKCGSLMHARKVFDRMKQKN 408
C +L +F+ + TV + + C N+ + ++++ Y++ G + K+FDR+ QK+
Sbjct: 148 CVALKNFKGIDFLSDTVSSLGMDC---NEF-VASSLIKAYLEYGKIDVPSKLFDRVLQKD 203
Query: 409 VISWSTMISGYGMHGHGREALFLFDQMKA-LIKPDHITFVSVLSACSHAGLIDEGWECFN 467
+ W+ M++GY G + F M+ I P+ +TF VLS C+ LID G + +
Sbjct: 204 CVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQ-LH 262
Query: 468 SMLRDFGVAPRPEHYACMVDMLGRAGKLNEAREFIERMPIRPDAGVWGSLLGA 520
++ GV ++ M + G+ ++A + RM R D W ++
Sbjct: 263 GLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLF-RMMSRADTVTWNCMISG 314
Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 100/218 (45%), Gaps = 11/218 (5%)
Query: 309 VSWTSMIEAYAQADLPLEALEVYRQM--ILRRVLPDSVTFLGVIRACSSLASFQQARTVH 366
+S +S+ + +A A P + R L +P ++ L ++ACS+ +Q + VH
Sbjct: 1 MSISSVAKRFAPAIAPYKKSLPLRNSSRFLEETIPRRLSLL--LQACSNPNLLRQGKQVH 58
Query: 367 GIIIHCFLGNQLALDTAVVDLYVKCGSLMHARKVFDR--MKQKNVISWSTMISGYGMHGH 424
+I + D ++ +Y CGS K+F R +++ ++ W+++IS + +G
Sbjct: 59 AFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRRSSIRPWNSIISSFVRNGL 118
Query: 425 GREAL-FLFDQMKALIKPDHITFVSVLSACSHAGLID-EGWECFNSMLRDFGVAPRPEHY 482
+AL F F + + PD TF ++ AC L + +G + + + G+
Sbjct: 119 LNQALAFYFKMLCFGVSPDVSTFPCLVKAC--VALKNFKGIDFLSDTVSSLGMDCNEFVA 176
Query: 483 ACMVDMLGRAGKLNEAREFIERMPIRPDAGVWGSLLGA 520
+ ++ GK++ + +R+ ++ D +W +L
Sbjct: 177 SSLIKAYLEYGKIDVPSKLFDRV-LQKDCVIWNVMLNG 213
>sp|O23169|PP353_ARATH Pentatricopeptide repeat-containing protein At4g37170
OS=Arabidopsis thaliana GN=PCMP-H5 PE=3 SV=1
Length = 691
Score = 406 bits (1044), Expect = e-112, Method: Compositional matrix adjust.
Identities = 230/704 (32%), Positives = 362/704 (51%), Gaps = 86/704 (12%)
Query: 57 QSLKTLHAFTLRSRFYHHHDLFLVTNLVSQYASLGSISHAFSLFSSVSDS-------CDL 109
+ L TLH F L+ NL S +ASL S + D C
Sbjct: 7 RKLTTLHGFILKR------------NLSSFHASLKRFSDKKFFNPNHEDGGVVVERLCRA 54
Query: 110 FLWNVMIRAFVDNRQFDRSLQLYAQMRELDINPDKFTFPFVLKACGYLRDIEFGVKVHKD 169
+ I + ++QL + ++ P T+ +++ C R +E G KVH+
Sbjct: 55 NRFGEAIDVLCGQKLLREAVQLLGRAKK----PPASTYCNLIQVCSQTRALEEGKKVHEH 110
Query: 170 AVDSGYWSDVFVGNSLIAMYGKCGRVDVCRQLFDEMPERNVVTWSSLTGAYAQNGCYEEG 229
SG+ + + N L+ MY KCG + R++FDEMP R++ +W+ + YA+ G EE
Sbjct: 111 IRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEA 170
Query: 230 LLLFKRMMDEGI--------------RPNRVVILNAM----------------------- 252
LF M ++ +P ++L ++
Sbjct: 171 RKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAA 230
Query: 253 -ACVRKVSEADDVCRVVVDNGLDLDQSLQNAAMVMYARCGRMDMARRFFEGILNKDLVSW 311
C+R+ E + +V GLD D+ L ++ M MY +CG +D AR F+ I+ KD+VSW
Sbjct: 231 VKCIRRGKE---IHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSW 287
Query: 312 TSMIEAYAQADLPLEALEVYRQMILRRVLPDSVTFLGVIRACSSLASFQQARTVHGIIIH 371
TSMI+ Y ++ E ++ +++ P+ TF GV+ AC+ L + + + VHG +
Sbjct: 288 TSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTR 347
Query: 372 CFLGNQLALDTAVVDLYVKCGSLMHARKVFDRMKQKNVISWSTMISGYGMHGHGREALFL 431
+++VD+Y KCG++ A+ V D + +++SW+++I G +G EAL
Sbjct: 348 VGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKY 407
Query: 432 FDQM-KALIKPDHITFVSVLSACSHAGLIDEGWECFNSMLRDFGVAPRPEHYACMVDMLG 490
FD + K+ KPDH+TFV+VLSAC+HAGL+++G E F S+ ++ +HY C+VD+L
Sbjct: 408 FDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLA 467
Query: 491 RAGKLNEAREFIERMPIRPDAGVWGSLLGACRIHSNVELAEMAAKALFDLDAENPGRYVI 550
R+G+ + + I MP++P +W S+LG C + N++LAE AA+ LF ++ ENP YV
Sbjct: 468 RSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVT 527
Query: 551 LSNIYASSGKRIEANRIRALMKRRGVKKITGHTVIEIKNKVHTFVAGDRSQPQTELTYSE 610
++NIYA++GK E ++R M+ GV K G + EIK K H F+A D S P
Sbjct: 528 MANIYAAAGKWEEEGKMRKRMQEIGVTKRPGSSWTEIKRKRHVFIAADTSHPMYNQIVEF 587
Query: 611 LAKLMDRIRREGYTPDLN---------------------FPFVFGLLNSGPGSAIRIKKN 649
L +L +++ EGY P + F +L++ G+AI++ KN
Sbjct: 588 LRELRKKMKEEGYVPATSLVLHDVEDEQKEENLVYHSEKLAVAFAILSTEEGTAIKVFKN 647
Query: 650 LRVCGDCHTATKFISKVTGREIIVRDAHRFHHFKDGTCSCGDYW 693
LR C DCH A KFIS +T R+I VRD+ RFH F++G CSCGDYW
Sbjct: 648 LRSCVDCHGAIKFISNITKRKITVRDSTRFHCFENGQCSCGDYW 691
>sp|Q9LZ19|PP364_ARATH Pentatricopeptide repeat-containing protein At5g04780
OS=Arabidopsis thaliana GN=PCMP-H16 PE=2 SV=2
Length = 635
Score = 406 bits (1043), Expect = e-112, Method: Compositional matrix adjust.
Identities = 223/622 (35%), Positives = 346/622 (55%), Gaps = 38/622 (6%)
Query: 110 FLWNVMIRAFVDNRQ-----FDRSLQLYAQMRELDINPDKFTFPF--------VLKACGY 156
F N +IR V R+ R++ + A + +++P +++ F +L+ C
Sbjct: 14 FTVNFLIRCKVLPRRSNTSSLSRNISVLASYDQEEVSPGRYSNEFSNRNLVHEILQLCAR 73
Query: 157 LRDIEFGVKVHKDAVDSGYWSDVFVGNSLIAMYGKCGRVDVCRQLFDEMPERNVVTWSSL 216
+ H + DV + N LI Y KCG V++ RQ+FD M ER++V+W+++
Sbjct: 74 NGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTM 133
Query: 217 TGAYAQNGCYEEGLLLFKRMMDEGIRPNRVVI---LNAMACVRKVSEADDVCRVVVDNGL 273
G Y +N E L +F M +EG + + I L+A E + + V +
Sbjct: 134 IGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCI 193
Query: 274 DLDQSLQNAAMVMYARCGRMDMARRFFEGILNKDLVSWTSMIEAYAQADLPLEALEVYRQ 333
DL+ + A + +YA+CG + A + FE + +K V+W+SM+ Y Q EAL +YR+
Sbjct: 194 DLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRR 253
Query: 334 MILRRVLPDSVTFLGVIRACSSLASFQQARTVHGIIIHCFLGNQLALDTAVVDLYVKCGS 393
+ + T VI ACS+LA+ + + +H +I G+ + + ++ VD+Y KCGS
Sbjct: 254 AQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGS 313
Query: 394 LMHARKVFDRMKQKNVISWSTMISGYGMHGHGREALFLFDQMKA-LIKPDHITFVSVLSA 452
L + +F +++KN+ W+T+ISG+ H +E + LF++M+ + P+ +TF S+LS
Sbjct: 314 LRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSV 373
Query: 453 CSHAGLIDEGWECFNSMLRDFGVAPRPEHYACMVDMLGRAGKLNEAREFIERMPIRPDAG 512
C H GL++EG F M +G++P HY+CMVD+LGRAG L+EA E I+ +P P A
Sbjct: 374 CGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTAS 433
Query: 513 VWGSLLGACRIHSNVELAEMAAKALFDLDAENPGRYVILSNIYASSGKRIEANRIRALMK 572
+WGSLL +CR++ N+ELAE+AA+ LF+L+ EN G +V+LSNIYA++ + E + R L++
Sbjct: 434 IWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAANKQWEEIAKSRKLLR 493
Query: 573 RRGVKKITGHTVIEIKNKVHTFVAGDRSQPQTELTYSELAKLMDRIRREGYTPDL----- 627
VKK+ G + I+IK+KVHTF G+ P+ S L L+ + R+ GY P +
Sbjct: 494 DCDVKKVRGKSWIDIKDKVHTFSVGESGHPRIREICSTLDNLVIKFRKFGYKPSVEHELH 553
Query: 628 ----------------NFPFVFGLLNSGPGSAIRIKKNLRVCGDCHTATKFISKVTGREI 671
VFGL+ S +RI KNLR+C DCH K S T R I
Sbjct: 554 DVEIGKKEELLMQHSEKLALVFGLMCLPESSPVRIMKNLRICVDCHEFMKAASMATRRFI 613
Query: 672 IVRDAHRFHHFKDGTCSCGDYW 693
IVRD +RFHHF DG CSCGD+W
Sbjct: 614 IVRDVNRFHHFSDGHCSCGDFW 635
Score = 134 bits (338), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 86/348 (24%), Positives = 168/348 (48%), Gaps = 6/348 (1%)
Query: 76 DLFLVTNLVSQYASLGSISHAFSLFSSVSDSCDLFLWNVMIRAFVDNRQFDRSLQLYAQM 135
D+ L+ L++ Y+ G + A +F + + L WN MI + NR +L ++ +M
Sbjct: 95 DVTLLNVLINAYSKCGFVELARQVFDGMLER-SLVSWNTMIGLYTRNRMESEALDIFLEM 153
Query: 136 RELDINPDKFTFPFVLKACGYLRDIEFGVKVHKDAVDSGYWSDVFVGNSLIAMYGKCGRV 195
R +FT VL ACG D K+H +V + +++VG +L+ +Y KCG +
Sbjct: 154 RNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMI 213
Query: 196 DVCRQLFDEMPERNVVTWSSLTGAYAQNGCYEEGLLLFKRMMDEGIRPNRVVILNAMACV 255
Q+F+ M +++ VTWSS+ Y QN YEE LLL++R + N+ + + +
Sbjct: 214 KDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICAC 273
Query: 256 RKVS---EADDVCRVVVDNGLDLDQSLQNAAMVMYARCGRMDMARRFFEGILNKDLVSWT 312
++ E + V+ +G + + ++A+ MYA+CG + + F + K+L W
Sbjct: 274 SNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWN 333
Query: 313 SMIEAYAQADLPLEALEVYRQMILRRVLPDSVTFLGVIRACSSLASFQQARTVHGIIIHC 372
++I +A+ P E + ++ +M + P+ VTF ++ C ++ R ++
Sbjct: 334 TIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTT 393
Query: 373 F-LGNQLALDTAVVDLYVKCGSLMHARKVFDRMKQKNVIS-WSTMISG 418
+ L + + +VD+ + G L A ++ + S W ++++
Sbjct: 394 YGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLAS 441
>sp|Q9FRI5|PPR57_ARATH Pentatricopeptide repeat-containing protein At1g25360
OS=Arabidopsis thaliana GN=PCMP-H74 PE=2 SV=1
Length = 790
Score = 404 bits (1039), Expect = e-111, Method: Compositional matrix adjust.
Identities = 234/712 (32%), Positives = 370/712 (51%), Gaps = 104/712 (14%)
Query: 81 TNLVSQYASLGSISHAFSLFSSVSDSC--DLFLWNVMIRAFVDNRQFDRSLQLYAQMREL 138
T +VS Y + G I+ A +F + C D ++N MI F N ++ L+ +M+
Sbjct: 84 TTMVSGYCASGDITLARGVFEK-APVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHE 142
Query: 139 DINPDKFTFPFVLKACGYLRDIEFG-VKVHKDAVDSGYWSDVFVGNSLIAMYGKCGR--- 194
PD FTF VL + D E V+ H A+ SG V N+L+++Y KC
Sbjct: 143 GFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPS 202
Query: 195 -VDVCRQLFDEMPERNVVTWSSLTGAYAQNGCYEEGLLLFKRMMDEGIRPNRVVILNAM- 252
+ R++FDE+ E++ +W+++ Y +NG ++ G L + M D ++V NAM
Sbjct: 203 LLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDN----MKLVAYNAMI 258
Query: 253 -ACVRK--VSEADDVCRVVVDNGLDLDQ-------------------------------- 277
V + EA ++ R +V +G++LD+
Sbjct: 259 SGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDF 318
Query: 278 --SLQNAAMVMYARCGRMDMARRFFEGILNKDLVSWTSMIEAYAQADLPLEALEVYRQMI 335
N+ + +Y +CG+ D AR FE + KDLVSW +++ Y + EA ++++M
Sbjct: 319 SFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMK 378
Query: 336 LRRVL-------------------------------PDSVTFLGVIRACSSLASFQQART 364
+ +L P F G I++C+ L ++ +
Sbjct: 379 EKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQ 438
Query: 365 VHGIIIHCFLGNQLALDTAVVDLYVKCGSLMHARKVFDRMKQKNVISWSTMISGYGMHGH 424
H ++ + L+ A++ +Y KCG + AR+VF M + +SW+ +I+ G HGH
Sbjct: 439 YHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGH 498
Query: 425 GREALFLFDQM-KALIKPDHITFVSVLSACSHAGLIDEGWECFNSMLRDFGVAPRPEHYA 483
G EA+ ++++M K I+PD IT ++VL+ACSHAGL+D+G + F+SM + + P +HYA
Sbjct: 499 GAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYA 558
Query: 484 CMVDMLGRAGKLNEAREFIERMPIRPDAGVWGSLLGACRIHSNVELAEMAAKALFDLDAE 543
++D+L R+GK ++A IE +P +P A +W +LL CR+H N+EL +AA LF L E
Sbjct: 559 RLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPE 618
Query: 544 NPGRYVILSNIYASSGKRIEANRIRALMKRRGVKKITGHTVIEIKNKVHTFVAGDRSQPQ 603
+ G Y++LSN++A++G+ E R+R LM+ RGVKK + IE++ +VHTF+ D S P+
Sbjct: 619 HDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSHPE 678
Query: 604 TELTYSELAKLMDRIRREGYTPDLNF----------------------PFVFGLLNSGPG 641
E Y L L +RR GY PD +F FGL+ PG
Sbjct: 679 AEAVYIYLQDLGKEMRRLGYVPDTSFVLHDVESDGHKEDMLTTHSEKIAVAFGLMKLPPG 738
Query: 642 SAIRIKKNLRVCGDCHTATKFISKVTGREIIVRDAHRFHHFKDGTCSCGDYW 693
+ IRI KNLR CGDCH +F+S V R+II+RD RFHHF++G CSCG++W
Sbjct: 739 TTIRIFKNLRTCGDCHNFFRFLSWVVQRDIILRDRKRFHHFRNGECSCGNFW 790
Score = 132 bits (333), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 120/522 (22%), Positives = 209/522 (40%), Gaps = 125/522 (23%)
Query: 151 LKACGYLR--DIEFGVKVHKDAVDSGYWSDVFVGNSLIAMYGKCGRVDVCRQLFDEMPE- 207
L+ C LR ++ VH + + G+ + N LI +Y K ++ RQLFDE+ E
Sbjct: 19 LRLCLPLRRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEP 78
Query: 208 --------------------------------RNVVTWSSLTGAYAQNGCYEEGLLLFKR 235
R+ V ++++ ++ N + LF +
Sbjct: 79 DKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCK 138
Query: 236 MMDEGIRPNRVVILNAMACVRKVSEADDVC----RVVVDNGLDLDQSLQNAAMVMYARCG 291
M EG +P+ + +A + V++ + C + +G S+ NA + +Y++C
Sbjct: 139 MKHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCA 198
Query: 292 R----MDMARRFFEGILNKDLVSWTS--------------------------------MI 315
+ AR+ F+ IL KD SWT+ MI
Sbjct: 199 SSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMI 258
Query: 316 EAYAQADLPLEALEVYRQMILRRVLPDSVTFLGVIRACSSLASFQQARTVHGIIIHCFLG 375
Y EALE+ R+M+ + D T+ VIRAC++ Q + VH ++
Sbjct: 259 SGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLR-RED 317
Query: 376 NQLALDTAVVDLYVKCGSLMHARKVFDRMKQKNVISWSTMISGYGMHGHGREALFLFDQM 435
D ++V LY KCG AR +F++M K+++SW+ ++SGY GH EA +F +M
Sbjct: 318 FSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEM 377
Query: 436 KALIKPDHITFVSVLSACSHAGLIDEGWECFNSMLRD------------------FGVAP 477
K + + ++++ ++S + G +EG + F+ M R+ G
Sbjct: 378 K---EKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYC 434
Query: 478 RPEHY----------------ACMVDMLGRAGKLNEAREFIERMPIRPDAGVWGSLLGAC 521
+ Y ++ M + G + EAR+ MP D+ W +L+ A
Sbjct: 435 NGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCL-DSVSWNALIAAL 493
Query: 522 RIHSNVELA-----EMAAKALFDLDAENPGRYVILSNIYASS 558
H + A EM K + P R +L+ + A S
Sbjct: 494 GQHGHGAEAVDVYEEMLKKGI------RPDRITLLTVLTACS 529
Score = 106 bits (265), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 113/246 (45%), Gaps = 33/246 (13%)
Query: 41 FDPETCISSIKQCQT---LQSLKTLHAFTLRSRFYHHH---------------------- 75
D T S I+ C T LQ K +HA+ LR + H
Sbjct: 284 LDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFSFHFDNSLVSLYYKCGKFDEARAIF 343
Query: 76 ------DLFLVTNLVSQYASLGSISHAFSLFSSVSDSCDLFLWNVMIRAFVDNRQFDRSL 129
DL L+S Y S G I A +F + + ++ W +MI +N + L
Sbjct: 344 EKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEK-NILSWMIMISGLAENGFGEEGL 402
Query: 130 QLYAQMRELDINPDKFTFPFVLKACGYLRDIEFGVKVHKDAVDSGYWSDVFVGNSLIAMY 189
+L++ M+ P + F +K+C L G + H + G+ S + GN+LI MY
Sbjct: 403 KLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMY 462
Query: 190 GKCGRVDVCRQLFDEMPERNVVTWSSLTGAYAQNGCYEEGLLLFKRMMDEGIRPNRVVIL 249
KCG V+ RQ+F MP + V+W++L A Q+G E + +++ M+ +GIRP+R+ +L
Sbjct: 463 AKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLL 522
Query: 250 NAM-AC 254
+ AC
Sbjct: 523 TVLTAC 528
Score = 97.1 bits (240), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 100/381 (26%), Positives = 173/381 (45%), Gaps = 53/381 (13%)
Query: 240 GIRPNRVVILNAMACVRKVSEADDVCRVVVDNGLDLDQSLQNAAMVMYARCGRMDMARRF 299
G +P R ILN + V S + R + D + D+ + + Y G + +AR
Sbjct: 44 GFQP-RAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTTMVSGYCASGDITLARGV 102
Query: 300 FEG--ILNKDLVSWTSMIEAYAQADLPLEALEVYRQMILRRVLPDSVTFLGVIRACSSLA 357
FE + +D V + +MI ++ + A+ ++ +M PD+ TF V+ + +A
Sbjct: 103 FEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVLAGLALVA 162
Query: 358 SFQ-QARTVHGIIIHCFLGNQLALDTAVVDLYVKCGS---LMH-ARKVFDRMKQKNVISW 412
+ Q H + G ++ A+V +Y KC S L+H ARKVFD + +K+ SW
Sbjct: 163 DDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSW 222
Query: 413 STMISGYGMHGH---GREAL-FLFDQMKAL-----------------------------I 439
+TM++GY +G+ G E L + D MK + I
Sbjct: 223 TTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGI 282
Query: 440 KPDHITFVSVLSACSHAGLIDEGWECFNSMLR--DFGVAPRPEHY-ACMVDMLGRAGKLN 496
+ D T+ SV+ AC+ AGL+ G + +LR DF H+ +V + + GK +
Sbjct: 283 ELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFSF-----HFDNSLVSLYYKCGKFD 337
Query: 497 EAREFIERMPIRPDAGVWGSLLGACRIHSNVELAEMAAKALFDLDAENPGRYVILSNIYA 556
EAR E+MP + D W +LL ++ A++ K ++ +N ++I+ + A
Sbjct: 338 EARAIFEKMPAK-DLVSWNALLSGYVSSGHIGEAKLIFK---EMKEKNILSWMIMISGLA 393
Query: 557 SSGKRIEANRIRALMKRRGVK 577
+G E ++ + MKR G +
Sbjct: 394 ENGFGEEGLKLFSCMKREGFE 414
>sp|Q9CAA8|PP108_ARATH Putative pentatricopeptide repeat-containing protein At1g68930
OS=Arabidopsis thaliana GN=PCMP-H22 PE=3 SV=1
Length = 743
Score = 399 bits (1024), Expect = e-110, Method: Compositional matrix adjust.
Identities = 224/675 (33%), Positives = 352/675 (52%), Gaps = 59/675 (8%)
Query: 76 DLFLVTNLVSQYASLGSISHAFSLFSSVSDSCDLFLWNVMIRAFVDNRQFDRSLQLY-AQ 134
+LF NL+ Y+ G IS S F + D D WNV+I + + +++ Y
Sbjct: 71 NLFSWNNLLLAYSKAGLISEMESTFEKLPDR-DGVTWNVLIEGYSLSGLVGAAVKAYNTM 129
Query: 135 MRELDINPDKFTFPFVLKACGYLRDIEFGVKVHKDAVDSGYWSDVFVGNSLIAMYGK--- 191
MR+ N + T +LK + G ++H + G+ S + VG+ L+ MY
Sbjct: 130 MRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGC 189
Query: 192 ----------------------------CGRVDVCRQLFDEMPERNVVTWSSLTGAYAQN 223
CG ++ QLF M E++ V+W+++ AQN
Sbjct: 190 ISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGM-EKDSVSWAAMIKGLAQN 248
Query: 224 GCYEEGLLLFKRMMDEGIRPNRV---VILNAMACVRKVSEADDVCRVVVDNGLDLDQSLQ 280
G +E + F+ M +G++ ++ +L A + ++E + ++ +
Sbjct: 249 GLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVG 308
Query: 281 NAAMVMYARCGRMDMARRFFEGILNKDLVSWTSMIEAYAQADLPLEALEVYRQMILRRVL 340
+A + MY +C + A+ F+ + K++VSWT+M+ Y Q EA++++ M +
Sbjct: 309 SALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGID 368
Query: 341 PDSVTFLGVIRACSSLASFQQARTVHGIIIHCFLGNQLALDTAVVDLYVKCGSLMHARKV 400
PD T I AC++++S ++ HG I L + + + ++V LY KCG + + ++
Sbjct: 369 PDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRL 428
Query: 401 FDRMKQKNVISWSTMISGYGMHGHGREALFLFDQM-KALIKPDHITFVSVLSACSHAGLI 459
F+ M ++ +SW+ M+S Y G E + LFD+M + +KPD +T V+SACS AGL+
Sbjct: 429 FNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLV 488
Query: 460 DEGWECFNSMLRDFGVAPRPEHYACMVDMLGRAGKLNEAREFIERMPIRPDAGVWGSLLG 519
++G F M ++G+ P HY+CM+D+ R+G+L EA FI MP PDA W +LL
Sbjct: 489 EKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLS 548
Query: 520 ACRIHSNVELAEMAAKALFDLDAENPGRYVILSNIYASSGKRIEANRIRALMKRRGVKKI 579
ACR N+E+ + AA++L +LD +P Y +LS+IYAS GK ++R M+ + VKK
Sbjct: 549 ACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKE 608
Query: 580 TGHTVIEIKNKVHTFVAGDRSQPQTELTYSELAKLMDRIRREGYTPDLNF---------- 629
G + I+ K K+H+F A D S P + Y++L +L ++I GY PD +F
Sbjct: 609 PGQSWIKWKGKLHSFSADDESSPYLDQIYAKLEELNNKIIDNGYKPDTSFVHHDVEEAVK 668
Query: 630 -----------PFVFGLLNSGPGSAIRIKKNLRVCGDCHTATKFISKVTGREIIVRDAHR 678
FGL+ G IR+ KNLRVC DCH ATK IS VTGREI+VRDA R
Sbjct: 669 VKMLNYHSERLAIAFGLIFVPSGQPIRVGKNLRVCVDCHNATKHISSVTGREILVRDAVR 728
Query: 679 FHHFKDGTCSCGDYW 693
FH FKDGTCSCGD+W
Sbjct: 729 FHRFKDGTCSCGDFW 743
Score = 155 bits (392), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 106/425 (24%), Positives = 191/425 (44%), Gaps = 76/425 (17%)
Query: 166 VHKDAVDSGYWSDVFVGNSLIAMYGKCGRVDVCRQLFDEMPERNVVTWSSLTGAYAQNGC 225
+H + + + + + F+ N+++ Y R++FD +P+ N+ +W++L AY++ G
Sbjct: 28 IHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSKAGL 87
Query: 226 YEEGLLLFKRMMD-EGIRPN-------------------------------RVVILNAMA 253
E F+++ D +G+ N RV ++ +
Sbjct: 88 ISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTMLK 147
Query: 254 CVRK---VSEADDVCRVVVDNGLDLDQSLQNAAMVMYARCGRMDMARRFFEGI------- 303
VS + V+ G + + + + MYA G + A++ F G+
Sbjct: 148 LSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVM 207
Query: 304 -----------------------LNKDLVSWTSMIEAYAQADLPLEALEVYRQMILRRVL 340
+ KD VSW +MI+ AQ L EA+E +R+M ++ +
Sbjct: 208 YNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLK 267
Query: 341 PDSVTFLGVIRACSSLASFQQARTVHGIIIHCFLGNQLALDTAVVDLYVKCGSLMHARKV 400
D F V+ AC L + + + +H II + + + +A++D+Y KC L +A+ V
Sbjct: 268 MDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTV 327
Query: 401 FDRMKQKNVISWSTMISGYGMHGHGREALFLF-DQMKALIKPDHITFVSVLSACSHAGLI 459
FDRMKQKNV+SW+ M+ GYG G EA+ +F D ++ I PDH T +SAC++ +
Sbjct: 328 FDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSL 387
Query: 460 DEGWECFNSMLRDFGVAPRPEHYAC----MVDMLGRAGKLNEAREFIERMPIRPDAGVWG 515
+EG S + HY +V + G+ G ++++ M +R DA W
Sbjct: 388 EEG-----SQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVR-DAVSWT 441
Query: 516 SLLGA 520
+++ A
Sbjct: 442 AMVSA 446
Score = 125 bits (314), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 142/278 (51%), Gaps = 11/278 (3%)
Query: 48 SSIKQCQTLQSL---KTLHAFTLRSRFYHHHDLFLVTNLVSQYASLGSISHAFSLFSSVS 104
S + C L ++ K +HA +R+ F H +++ + L+ Y + +A ++F +
Sbjct: 275 SVLPACGGLGAINEGKQIHACIIRTNFQDH--IYVGSALIDMYCKCKCLHYAKTVFDRMK 332
Query: 105 DSCDLFLWNVMIRAFVDNRQFDRSLQLYAQMRELDINPDKFTFPFVLKACGYLRDIEFGV 164
++ W M+ + + + +++++ M+ I+PD +T + AC + +E G
Sbjct: 333 QK-NVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGS 391
Query: 165 KVHKDAVDSGYWSDVFVGNSLIAMYGKCGRVDVCRQLFDEMPERNVVTWSSLTGAYAQNG 224
+ H A+ SG V V NSL+ +YGKCG +D +LF+EM R+ V+W+++ AYAQ G
Sbjct: 392 QFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFG 451
Query: 225 CYEEGLLLFKRMMDEGIRPNRVVILNAMACVRKVSEADDVCR----VVVDNGLDLDQSLQ 280
E + LF +M+ G++P+ V + ++ + + R + + G+
Sbjct: 452 RAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHY 511
Query: 281 NAAMVMYARCGRMDMARRFFEGI-LNKDLVSWTSMIEA 317
+ + +++R GR++ A RF G+ D + WT+++ A
Sbjct: 512 SCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSA 549
Score = 67.4 bits (163), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 92/398 (23%), Positives = 147/398 (36%), Gaps = 107/398 (26%)
Query: 279 LQNAAMVMYARCGRMDMARRFFEGILNKDLVSWTSMIEAYAQADLPLEALEVYRQMILR- 337
L N + YA ARR F+ I +L SW +++ AY++A L E + ++ R
Sbjct: 43 LYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSKAGLISEMESTFEKLPDRD 102
Query: 338 ----RVLPDS---------------------------VTFLGVIRACSSLASFQQARTVH 366
VL + VT + +++ SS + +H
Sbjct: 103 GVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIH 162
Query: 367 GIIIHCFLGNQLALDTAVVDLYVKCGSLMHARKVFD------------------------ 402
G +I + L + + ++ +Y G + A+KVF
Sbjct: 163 GQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIE 222
Query: 403 ------RMKQKNVISWSTMISGYGMHGHGREALFLFDQMKAL-IKPDHITFVSVLSACSH 455
R +K+ +SW+ MI G +G +EA+ F +MK +K D F SVL AC
Sbjct: 223 DALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGG 282
Query: 456 AGLIDEGWECFNSMLR--------------DFGVAPRPEHYA----------------CM 485
G I+EG + ++R D + HYA M
Sbjct: 283 LGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAM 342
Query: 486 VDMLGRAGKLNEAREF---IERMPIRPDAGVWGSLLGACRIHSNVELAEMAAKALFDLDA 542
V G+ G+ EA + ++R I PD G + AC +NV E ++ F A
Sbjct: 343 VVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISAC---ANVSSLEEGSQ--FHGKA 397
Query: 543 ENPG--RYVILSN----IYASSGKRIEANRIRALMKRR 574
G YV +SN +Y G ++ R+ M R
Sbjct: 398 ITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVR 435
Score = 60.8 bits (146), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 63/127 (49%), Gaps = 6/127 (4%)
Query: 350 IRACSSLASFQQARTV---HGIIIHCFLGNQLALDTAVVDLYVKCGSLMHARKVFDRMKQ 406
I+ C L + Q+R V HG II + L +V Y S +AR+VFDR+ Q
Sbjct: 10 IKQCIGLGARNQSRYVKMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQ 69
Query: 407 KNVISWSTMISGYGMHGHGREALFLFDQMKALIKPDHITFVSVLSACSHAGLIDEGWECF 466
N+ SW+ ++ Y G E F++ L D +T+ ++ S +GL+ + +
Sbjct: 70 PNLFSWNNLLLAYSKAGLISEMESTFEK---LPDRDGVTWNVLIEGYSLSGLVGAAVKAY 126
Query: 467 NSMLRDF 473
N+M+RDF
Sbjct: 127 NTMMRDF 133
>sp|Q9M9E2|PPR45_ARATH Pentatricopeptide repeat-containing protein At1g15510,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H73 PE=2
SV=1
Length = 866
Score = 397 bits (1021), Expect = e-109, Method: Compositional matrix adjust.
Identities = 219/647 (33%), Positives = 356/647 (55%), Gaps = 29/647 (4%)
Query: 70 RFYHHHDLFLVTNLVSQYASLGSISHAFSLFSSVSDSCDLFLWNVMIRAFVDNRQFDRSL 129
R+ + D+ +V L++ Y G + A LF + D+ WN MI + +N L
Sbjct: 224 RYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRR-DIISWNAMISGYFENGMCHEGL 282
Query: 130 QLYAQMRELDINPDKFTFPFVLKACGYLRDIEFGVKVHKDAVDSGYWSDVFVGNSLIAMY 189
+L+ MR L ++PD T V+ AC L D G +H + +G+ D+ V NSL MY
Sbjct: 283 ELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMY 342
Query: 190 GKCGRVDVCRQLFDEMPERNVVTWSSLTGAYAQNGCYEEGLLLFKRMMDEGIRPNRVVI- 248
G +LF M +++V+W+++ Y N ++ + ++ M + ++P+ + +
Sbjct: 343 LNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVA 402
Query: 249 --LNAMACVRKVSEADDVCRVVVDNGLDLDQSLQNAAMVMYARCGRMDMARRFFEGILNK 306
L+A A + + ++ ++ + L + N + MY++C +D A F I K
Sbjct: 403 AVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRK 462
Query: 307 DLVSWTSMIEAYAQADLPLEALEVYRQMILRRVLPDSVTFLGVIRACSSLASFQQARTVH 366
+++SWTS+I + EAL RQM + + P+++T + AC+ + + + +H
Sbjct: 463 NVISWTSIIAGLRLNNRCFEALIFLRQMKMT-LQPNAITLTAALAACARIGALMCGKEIH 521
Query: 367 GIIIHCFLGNQLALDTAVVDLYVKCGSLMHARKVFDRMKQKNVISWSTMISGYGMHGHGR 426
++ +G L A++D+YV+CG + A F+ K K+V SW+ +++GY G G
Sbjct: 522 AHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNSQK-KDVTSWNILLTGYSERGQGS 580
Query: 427 EALFLFDQM-KALIKPDHITFVSVLSACSHAGLIDEGWECFNSMLRDFGVAPRPEHYACM 485
+ LFD+M K+ ++PD ITF+S+L CS + ++ +G F+ M D+GV P +HYAC+
Sbjct: 581 MVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKM-EDYGVTPNLKHYACV 639
Query: 486 VDMLGRAGKLNEAREFIERMPIRPDAGVWGSLLGACRIHSNVELAEMAAKALFDLDAENP 545
VD+LGRAG+L EA +FI++MP+ PD VWG+LL ACRIH ++L E++A+ +F+LD ++
Sbjct: 640 VDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIHHKIDLGELSAQHIFELDKKSV 699
Query: 546 GRYVILSNIYASSGKRIEANRIRALMKRRGVKKITGHTVIEIKNKVHTFVAGDRSQPQTE 605
G Y++L N+YA GK E ++R +MK G+ G + +E+K KVH F++ D+ PQT+
Sbjct: 700 GYYILLCNLYADCGKWREVAKVRRMMKENGLTVDAGCSWVEVKGKVHAFLSDDKYHPQTK 759
Query: 606 LTYSELAKLMDRIRREGYTP--------------DLNF-------PFVFGLLNSGPGSAI 644
+ L +++ G T D F FGL+N+ PG I
Sbjct: 760 EINTVLEGFYEKMSEVGLTKISESSSMDETEISRDEIFCGHSERKAIAFGLINTVPGMPI 819
Query: 645 RIKKNLRVCGDCHTATKFISKVTGREIIVRDAHRFHHFKDGTCSCGD 691
+ KNL +C +CH KFISK REI VRDA FHHFKDG CSCGD
Sbjct: 820 WVTKNLSMCENCHDTVKFISKTVRREISVRDAEHFHHFKDGECSCGD 866
Score = 194 bits (493), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 119/413 (28%), Positives = 216/413 (52%), Gaps = 15/413 (3%)
Query: 122 NRQFDRSLQLYAQMRELDINPDKFTFPFVLKACGYLRDIEFGVKVHKDAVDSGYWSDVFV 181
N + + +++L M+EL + D+ F +++ C + R E G KV+ A+ S V +
Sbjct: 72 NGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVEL 131
Query: 182 GNSLIAMYGKCGRVDVCRQLFDEMPERNVVTWSSLTGAYAQNGCYEEGLLLFKRMM-DEG 240
GN+ +AM+ + G + +F +M ERN+ +W+ L G YA+ G ++E + L+ RM+ G
Sbjct: 132 GNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGG 191
Query: 241 IRPNRVV---ILNAMACVRKVSEADDVCRVVVDNGLDLDQSLQNAAMVMYARCGRMDMAR 297
++P+ +L + ++ +V VV G +LD + NA + MY +CG + AR
Sbjct: 192 VKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSAR 251
Query: 298 RFFEGILNKDLVSWTSMIEAYAQADLPLEALEVYRQMILRRVLPDSVTFLGVIRACSSLA 357
F+ + +D++SW +MI Y + + E LE++ M V PD +T VI AC L
Sbjct: 252 LLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLG 311
Query: 358 SFQQARTVHGIIIHCFLGNQLALDTAVVDLYVKCGSLMHARKVFDRMKQKNVISWSTMIS 417
+ R +H +I +++ ++ +Y+ GS A K+F RM++K+++SW+TMIS
Sbjct: 312 DRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMIS 371
Query: 418 GYGMHGHGREALFLFDQM-KALIKPDHITFVSVLSACSHAGLIDEGWECFNSMLRDFGVA 476
GY + +A+ + M + +KPD IT +VLSAC+ G +D G E L +
Sbjct: 372 GYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVE-----LHKLAIK 426
Query: 477 PRPEHYAC----MVDMLGRAGKLNEAREFIERMPIRPDAGVWGSLLGACRIHS 525
R Y +++M + +++A + +P R + W S++ R+++
Sbjct: 427 ARLISYVIVANNLINMYSKCKCIDKALDIFHNIP-RKNVISWTSIIAGLRLNN 478
>sp|Q9FND6|PP411_ARATH Pentatricopeptide repeat-containing protein At5g40410,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H15 PE=2
SV=1
Length = 608
Score = 397 bits (1019), Expect = e-109, Method: Compositional matrix adjust.
Identities = 217/565 (38%), Positives = 328/565 (58%), Gaps = 34/565 (6%)
Query: 160 IEFGVKVHKDAVDSGYWSDVFVGNSLIAMYGKCGRVDVC-RQLFDEMPERNVVTWSSLTG 218
IE +H V S + F+G+ L+ Y + G DVC +LFDEMPER++V+W+SL
Sbjct: 47 IELCRLLHCKVVKSVSYRHGFIGDQLVGCYLRLGH-DVCAEKLFDEMPERDLVSWNSLIS 105
Query: 219 AYAQNGCYEEGLLLFKRMM--DEGIRPNRVVILNAM-ACVRKVSEADDVC--RVVVDNGL 273
Y+ G + + RMM + G RPN V L+ + ACV S+ + C +V+ G+
Sbjct: 106 GYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGV 165
Query: 274 DLDQSLQNAAMVMYARCGRMDMARRFFEGILNKDLVSWTSMIEAYAQADLPLEALEVYRQ 333
+ + NA + Y + G + + + FE + K+LVSW +MI + Q L + L +
Sbjct: 166 LEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFN- 224
Query: 334 MILRRV--LPDSVTFLGVIRACSSLASFQQARTVHGIIIHCFLGNQLALDTAVVDLYVKC 391
+ RRV PD TFL V+R+C + + A+ +HG+I+ + TA++DLY K
Sbjct: 225 -MSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKL 283
Query: 392 GSLMHARKVFDRMKQKNVISWSTMISGYGMHGHGREALFLFDQMKAL-IKPDHITFVSVL 450
G L + VF + + ++W+ M++ Y HG GR+A+ F+ M I PDH+TF +L
Sbjct: 284 GRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYGISPDHVTFTHLL 343
Query: 451 SACSHAGLIDEGWECFNSMLRDFGVAPRPEHYACMVDMLGRAGKLNEAREFIERMPIRPD 510
+ACSH+GL++EG F +M + + + PR +HY+CMVD+LGR+G L +A I+ MP+ P
Sbjct: 344 NACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYGLIKEMPMEPS 403
Query: 511 AGVWGSLLGACRIHSNVELAEMAAKALFDLDAENPGRYVILSNIYASSGKRIEANRIRAL 570
+GVWG+LLGACR++ + +L AA+ LF+L+ + YV+LSNIY++SG +A+RIR L
Sbjct: 404 SGVWGALLGACRVYKDTQLGTKAAERLFELEPRDGRNYVMLSNIYSASGLWKDASRIRNL 463
Query: 571 MKRRGVKKITGHTVIEIKNKVHTFVAGDRSQPQTELTYSELAKLMDRIRRE-GYTPDLNF 629
MK++G+ + +G + IE NK+H FV GD S P++E +L ++ +++ E GY F
Sbjct: 464 MKQKGLVRASGCSYIEHGNKIHKFVVGDWSHPESEKIQKKLKEIRKKMKSEMGYKSKTEF 523
Query: 630 ---------------------PFVFGLLNSGPGSAIRIKKNLRVCGDCHTATKFISKVTG 668
FGLL P I I+KNLR+CGDCH K IS +
Sbjct: 524 VLHDVGEDVKEEMINQHSEKIAMAFGLLVVSPMEPIIIRKNLRICGDCHETAKAISLIEK 583
Query: 669 REIIVRDAHRFHHFKDGTCSCGDYW 693
R II+RD+ RFHHF DG+CSC DYW
Sbjct: 584 RRIIIRDSKRFHHFLDGSCSCSDYW 608
Score = 129 bits (325), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 88/343 (25%), Positives = 165/343 (48%), Gaps = 9/343 (2%)
Query: 26 RLFFSASSPQQQTEFFDPETCISSIKQCQTLQSLKTLHAFTLRSRFYHHHDLFLVTNLVS 85
R F S SS + + + I+++K C +++ + LH ++S Y H F+ LV
Sbjct: 18 RRFLSQSSFVHSLDA-NVSSLIAAVKSCVSIELCRLLHCKVVKSVSYRHG--FIGDQLVG 74
Query: 86 QYASLGSISHAFSLFSSVSDSCDLFLWNVMIRAFVDNRQFDRSLQLYAQM--RELDINPD 143
Y LG A LF + + DL WN +I + + ++ ++M E+ P+
Sbjct: 75 CYLRLGHDVCAEKLFDEMPER-DLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPN 133
Query: 144 KFTFPFVLKACGYLRDIEFGVKVHKDAVDSGYWSDVFVGNSLIAMYGKCGRVDVCRQLFD 203
+ TF ++ AC Y E G +H + G +V V N+ I YGK G + +LF+
Sbjct: 134 EVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFE 193
Query: 204 EMPERNVVTWSSLTGAYAQNGCYEEGLLLFKRMMDEGIRPNRVVILNAMACVRK---VSE 260
++ +N+V+W+++ + QNG E+GL F G P++ L + V
Sbjct: 194 DLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRL 253
Query: 261 ADDVCRVVVDNGLDLDQSLQNAAMVMYARCGRMDMARRFFEGILNKDLVSWTSMIEAYAQ 320
A + +++ G ++ + A + +Y++ GR++ + F I + D ++WT+M+ AYA
Sbjct: 254 AQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYAT 313
Query: 321 ADLPLEALEVYRQMILRRVLPDSVTFLGVIRACSSLASFQQAR 363
+A++ + M+ + PD VTF ++ ACS ++ +
Sbjct: 314 HGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHSGLVEEGK 356
Score = 46.6 bits (109), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 68/144 (47%), Gaps = 5/144 (3%)
Query: 79 LVTNLVSQYASLGSISHAFSLFSSVSDSCDLFLWNVMIRAFVDNRQFDRSLQLYAQMREL 138
+ T L+ Y+ LG + + ++F ++ S D W M+ A+ + +++ + M
Sbjct: 272 ITTALLDLYSKLGRLEDSSTVFHEIT-SPDSMAWTAMLAAYATHGFGRDAIKHFELMVHY 330
Query: 139 DINPDKFTFPFVLKACGYLRDIEFGVKVHKDAVDSGYWSDVFVGN--SLIAMYGKCGRVD 196
I+PD TF +L AC + +E G K + + + Y D + + ++ + G+ G +
Sbjct: 331 GISPDHVTFTHLLNACSHSGLVEEG-KHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQ 389
Query: 197 VCRQLFDEMP-ERNVVTWSSLTGA 219
L EMP E + W +L GA
Sbjct: 390 DAYGLIKEMPMEPSSGVWGALLGA 413
>sp|Q0WN60|PPR48_ARATH Pentatricopeptide repeat-containing protein At1g18485
OS=Arabidopsis thaliana GN=PCMP-H8 PE=2 SV=2
Length = 970
Score = 394 bits (1013), Expect = e-108, Method: Compositional matrix adjust.
Identities = 223/683 (32%), Positives = 363/683 (53%), Gaps = 34/683 (4%)
Query: 42 DPETCISSIKQCQTLQSL---KTLHAFTLRSRFYHHHDLFLVTNLVSQYASLGSISHAFS 98
D T ++ + C + + K +H + ++ R +L L L+ Y+ G I++A
Sbjct: 291 DVATLVTVLPVCAREREIGLGKGVHGWAVKLRL--DKELVLNNALMDMYSKCGCITNAQM 348
Query: 99 LFSSVSDSCDLFLWNVMIRAFVDNRQFDRSLQLYAQMRE--LDINPDKFTFPFVLKACGY 156
+F ++++ ++ WN M+ F + + QM D+ D+ T + C +
Sbjct: 349 IFK-MNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFH 407
Query: 157 LRDIEFGVKVHKDAVDSGYWSDVFVGNSLIAMYGKCGRVDVCRQLFDEMPERNVVTWSSL 216
+ ++H ++ + + V N+ +A Y KCG + +++F + + V +W++L
Sbjct: 408 ESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNAL 467
Query: 217 TGAYAQNGCYEEGLLLFKRMMDEGIRPNRVVI---LNAMACVRKVSEADDVCRVVVDNGL 273
G +AQ+ L +M G+ P+ + L+A + ++ + +V ++ N L
Sbjct: 468 IGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWL 527
Query: 274 DLDQSLQNAAMVMYARCGRMDMARRFFEGILNKDLVSWTSMIEAYAQADLPLEALEVYRQ 333
+ D + + + +Y CG + + F+ + +K LVSW ++I Y Q P AL V+RQ
Sbjct: 528 ERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQ 587
Query: 334 MILRRVLPDSVTFLGVIRACSSLASFQQARTVHGIIIHCFLGNQLALDTAVVDLYVKCGS 393
M+L + ++ + V ACS L S + R H + L + + +++D+Y K GS
Sbjct: 588 MVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGS 647
Query: 394 LMHARKVFDRMKQKNVISWSTMISGYGMHGHGREALFLFDQM-KALIKPDHITFVSVLSA 452
+ + KVF+ +K+K+ SW+ MI GYG+HG +EA+ LF++M + PD +TF+ VL+A
Sbjct: 648 ITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTA 707
Query: 453 CSHAGLIDEGWECFNSMLRDFGVAPRPEHYACMVDMLGRAGKLNEA-REFIERMPIRPDA 511
C+H+GLI EG + M FG+ P +HYAC++DMLGRAG+L++A R E M D
Sbjct: 708 CNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADV 767
Query: 512 GVWGSLLGACRIHSNVELAEMAAKALFDLDAENPGRYVILSNIYASSGKRIEANRIRALM 571
G+W SLL +CRIH N+E+ E A LF+L+ E P YV+LSN+YA GK + ++R M
Sbjct: 768 GIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRM 827
Query: 572 KRRGVKKITGHTVIEIKNKVHTFVAGDRSQPQTELTYSELAKLMDRIRREGYTPDL---- 627
++K G + IE+ KV +FV G+R E S + L +I + GY PD
Sbjct: 828 NEMSLRKDAGCSWIELNRKVFSFVVGERFLDGFEEIKSLWSILEMKISKMGYRPDTMSVQ 887
Query: 628 -----------------NFPFVFGLLNSGPGSAIRIKKNLRVCGDCHTATKFISKVTGRE 670
+GL+ + G+ IR+ KNLR+C DCH A K ISKV RE
Sbjct: 888 HDLSEEEKIEQLRGHSEKLALTYGLIKTSEGTTIRVYKNLRICVDCHNAAKLISKVMERE 947
Query: 671 IIVRDAHRFHHFKDGTCSCGDYW 693
I+VRD RFHHFK+G CSCGDYW
Sbjct: 948 IVVRDNKRFHHFKNGVCSCGDYW 970
Score = 209 bits (531), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 143/419 (34%), Positives = 218/419 (52%), Gaps = 30/419 (7%)
Query: 75 HDLFLVTNLVSQYASLGSISHAFSLFSSVSDSCDLFLWNVMIRAFVDNRQFDRSLQLYAQ 134
+D L T +++ YA GS + +F ++ S +LF WN +I ++ N +D L+ + +
Sbjct: 118 NDDVLCTRIITMYAMCGSPDDSRFVFDALR-SKNLFQWNAVISSYSRNELYDEVLETFIE 176
Query: 135 M-RELDINPDKFTFPFVLKACGYLRDIEFGVKVHKDAVDSGYWSDVFVGNSLIAMYGKCG 193
M D+ PD FT+P V+KAC + D+ G+ VH V +G DVFVGN+L++ YG G
Sbjct: 177 MISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHG 236
Query: 194 RVDVCRQLFDEMPERNVVTWSSLTGAYAQNGCYEEGLLLFKRMMDE----GIRPN---RV 246
V QLFD MPERN+V+W+S+ ++ NG EE LL MM+E P+ V
Sbjct: 237 FVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLV 296
Query: 247 VILNAMACVRKVSEADDVCRVVVDNGLDLDQSLQNAAMVMYARCGRMDMARRFFEGILNK 306
+L A R++ V V LD + L NA M MY++CG + A+ F+ NK
Sbjct: 297 TVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNK 356
Query: 307 DLVSWTSMIEAYAQADLPLEALEVYRQMIL--RRVLPDSVTFLGVIRAC---SSLASFQQ 361
++VSW +M+ ++ +V RQM+ V D VT L + C S L S ++
Sbjct: 357 NVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKE 416
Query: 362 ARTVHGIIIHC------FLGNQLALDTAVVDLYVKCGSLMHARKVFDRMKQKNVISWSTM 415
+HC F+ N+L + A V Y KCGSL +A++VF ++ K V SW+ +
Sbjct: 417 --------LHCYSLKQEFVYNELVAN-AFVASYAKCGSLSYAQRVFHGIRSKTVNSWNAL 467
Query: 416 ISGYGMHGHGREALFLFDQMK-ALIKPDHITFVSVLSACSHAGLIDEGWECFNSMLRDF 473
I G+ R +L QMK + + PD T S+LSACS + G E ++R++
Sbjct: 468 IGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNW 526
Score = 201 bits (512), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 148/523 (28%), Positives = 256/523 (48%), Gaps = 25/523 (4%)
Query: 50 IKQCQTLQSLK---TLHAFTLRSRFYHHHDLFLVTNLVSQYASLGSISHAFSLFSSVSDS 106
IK C + + +H +++ D+F+ LVS Y + G ++ A LF + +
Sbjct: 194 IKACAGMSDVGIGLAVHGLVVKTGLVE--DVFVGNALVSFYGTHGFVTDALQLFDIMPER 251
Query: 107 CDLFLWNVMIRAFVDNRQFDRSLQLYAQMRELDIN----PDKFTFPFVLKACGYLRDIEF 162
+L WN MIR F DN + S L +M E + + PD T VL C R+I
Sbjct: 252 -NLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGL 310
Query: 163 GVKVHKDAVDSGYWSDVFVGNSLIAMYGKCGRVDVCRQLFDEMPERNVVTWSSLTGAYAQ 222
G VH AV ++ + N+L+ MY KCG + + +F +NVV+W+++ G ++
Sbjct: 311 GKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSA 370
Query: 223 NGCYEEGLLLFKRMM--DEGIRPNRVVILNAM-ACVRK--VSEADDVCRVVVDNGLDLDQ 277
G + ++M+ E ++ + V ILNA+ C + + ++ + ++
Sbjct: 371 EGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNE 430
Query: 278 SLQNAAMVMYARCGRMDMARRFFEGILNKDLVSWTSMIEAYAQADLPLEALEVYRQMILR 337
+ NA + YA+CG + A+R F GI +K + SW ++I +AQ++ P +L+ + QM +
Sbjct: 431 LVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKIS 490
Query: 338 RVLPDSVTFLGVIRACSSLASFQQARTVHGIIIHCFLGNQLALDTAVVDLYVKCGSLMHA 397
+LPDS T ++ ACS L S + + VHG II +L L + +V+ LY+ CG L
Sbjct: 491 GLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTV 550
Query: 398 RKVFDRMKQKNVISWSTMISGYGMHGHGREALFLFDQMKAL-IKPDHITFVSVLSACSHA 456
+ +FD M+ K+++SW+T+I+GY +G AL +F QM I+ I+ + V ACS
Sbjct: 551 QALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLL 610
Query: 457 GLIDEGWECFNSMLRDFGVAPRPEHYAC-MVDMLGRAGKLNEAREFIERMPIRPDAGVWG 515
+ G E L+ + AC ++DM + G + ++ + + + A W
Sbjct: 611 PSLRLGREAHAYALKH--LLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTAS-WN 667
Query: 516 SLLGACRIHSNVELAEMAAKALFDLD--AENPGRYVILSNIYA 556
+++ IH LA+ A K ++ NP L + A
Sbjct: 668 AMIMGYGIHG---LAKEAIKLFEEMQRTGHNPDDLTFLGVLTA 707
Score = 139 bits (349), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 90/323 (27%), Positives = 156/323 (48%), Gaps = 12/323 (3%)
Query: 149 FVLKACGYLRDIEFGVKVHKDAVDSGYW-SDVFVGNSLIAMYGKCGRVDVCRQLFDEMPE 207
+L+A G +DIE G K+H+ S +D + +I MY CG D R +FD +
Sbjct: 89 LLLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRS 148
Query: 208 RNVVTWSSLTGAYAQNGCYEEGLLLFKRMMD-EGIRPNRVV---ILNAMACVRKVSEADD 263
+N+ W+++ +Y++N Y+E L F M+ + P+ ++ A A + V
Sbjct: 149 KNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLA 208
Query: 264 VCRVVVDNGLDLDQSLQNAAMVMYARCGRMDMARRFFEGILNKDLVSWTSMIEAYAQADL 323
V +VV GL D + NA + Y G + A + F+ + ++LVSW SMI ++
Sbjct: 209 VHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGF 268
Query: 324 PLEALEVYRQMILRR----VLPDSVTFLGVIRACSSLASFQQARTVHGIIIHCFLGNQLA 379
E+ + +M+ +PD T + V+ C+ + VHG + L +L
Sbjct: 269 SEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELV 328
Query: 380 LDTAVVDLYVKCGSLMHARKVFDRMKQKNVISWSTMISGYGMHGHGREALFLFDQMKAL- 438
L+ A++D+Y KCG + +A+ +F KNV+SW+TM+ G+ G + QM A
Sbjct: 329 LNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGG 388
Query: 439 --IKPDHITFVSVLSACSHAGLI 459
+K D +T ++ + C H +
Sbjct: 389 EDVKADEVTILNAVPVCFHESFL 411
Score = 59.3 bits (142), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 93/200 (46%), Gaps = 10/200 (5%)
Query: 349 VIRACSSLASFQQARTVHGIIIHCF-LGNQLALDTAVVDLYVKCGSLMHARKVFDRMKQK 407
+++A + R +H ++ L N L T ++ +Y CGS +R VFD ++ K
Sbjct: 90 LLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSK 149
Query: 408 NVISWSTMISGYGMHGHGREALFLFDQMKAL--IKPDHITFVSVLSACSHAGLIDEGWE- 464
N+ W+ +IS Y + E L F +M + + PDH T+ V+ AC AG+ D G
Sbjct: 150 NLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKAC--AGMSDVGIGL 207
Query: 465 CFNSMLRDFGVAPRPEHYACMVDMLGRAGKLNEAREFIERMPIRPDAGVWGSLLGACRIH 524
+ ++ G+ +V G G + +A + + MP R + W S++ R+
Sbjct: 208 AVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPER-NLVSWNSMI---RVF 263
Query: 525 SNVELAEMAAKALFDLDAEN 544
S+ +E + L ++ EN
Sbjct: 264 SDNGFSEESFLLLGEMMEEN 283
>sp|Q9ZVF4|PP140_ARATH Pentatricopeptide repeat-containing protein At2g01510,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H37 PE=3
SV=1
Length = 584
Score = 392 bits (1007), Expect = e-108, Method: Compositional matrix adjust.
Identities = 203/556 (36%), Positives = 319/556 (57%), Gaps = 27/556 (4%)
Query: 165 KVHKDAVDSGYWSDVFVGNSLIAMYGKCGRVDVCRQLFDEMPERNVVTWSSLTGAYAQNG 224
K+H + +G+ + L+ G + RQ+FDEM + + W++L Y +N
Sbjct: 29 KIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRNQ 88
Query: 225 CYEEGLLLFKRMMDEGIRPNRVV---ILNAMACVRKVSEADDVCRVVVDNGLDLDQSLQN 281
E LLL+K+M D G+RP+ ++ A++ + S + VV G +
Sbjct: 89 LPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGIVAT 148
Query: 282 AAMVMYARCGRMDMARRFFEGILNKDLVSWTSMIEAYAQADLPLEALEVYRQMILRRVLP 341
++MY + G + A FE + KDLV+W + + Q ALE + +M V
Sbjct: 149 ELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQF 208
Query: 342 DSVTFLGVIRACSSLASFQQARTVHGIIIHCFLGNQLALDTAVVDLYVKCGSLMHARKVF 401
DS T + ++ AC L S + ++ + + ++ A +D+++KCG+ AR +F
Sbjct: 209 DSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVLF 268
Query: 402 DRMKQKNVISWSTMISGYGMHGHGREALFLFDQMKAL-IKPDHITFVSVLSACSHAGLID 460
+ MKQ+NV+SWSTMI GY M+G REAL LF M+ ++P+++TF+ VLSACSHAGL++
Sbjct: 269 EEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLVN 328
Query: 461 EGWECFNSMLR--DFGVAPRPEHYACMVDMLGRAGKLNEAREFIERMPIRPDAGVWGSLL 518
EG F+ M++ D + PR EHYACMVD+LGR+G L EA EFI++MP+ PD G+WG+LL
Sbjct: 329 EGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWGALL 388
Query: 519 GACRIHSNVELAEMAAKALFDLDAENPGRYVILSNIYASSGKRIEANRIRALMKRRGVKK 578
GAC +H ++ L + A L + + +V+LSNIYA++GK +++R+ M++ G KK
Sbjct: 389 GACAVHRDMILGQKVADVLVETAPDIGSYHVLLSNIYAAAGKWDCVDKVRSKMRKLGTKK 448
Query: 579 ITGHTVIEIKNKVHTFVAGDRSQPQTELTYSELAKLMDRIRREGYTPDL----------- 627
+ ++ +E + K+H F GD+S PQ++ Y +L +++ +IR+ GY PD
Sbjct: 449 VAAYSSVEFEGKIHFFNRGDKSHPQSKAIYEKLDEILKKIRKMGYVPDTCSVFHDVEMEE 508
Query: 628 ----------NFPFVFGLLNSGPGSAIRIKKNLRVCGDCHTATKFISKVTGREIIVRDAH 677
FGL+ PG IR+ KNLR C DCH +KF+S +T EII+RD +
Sbjct: 509 KECSLSHHSEKLAIAFGLIKGRPGHPIRVMKNLRTCDDCHAFSKFVSSLTSTEIIMRDKN 568
Query: 678 RFHHFKDGTCSCGDYW 693
RFHHF++G CSC ++W
Sbjct: 569 RFHHFRNGVCSCKEFW 584
Score = 157 bits (396), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 102/376 (27%), Positives = 180/376 (47%), Gaps = 16/376 (4%)
Query: 57 QSLKTLHAFTLRSRFYHHHDLFLVTNLVSQYASLGSISHAFSLFSSVSDSCDLFLWNVMI 116
+ LK +HA LR+ F + L +T L+ +G + +A +F + +FLWN +
Sbjct: 25 KQLKKIHAIVLRTGFSEKNSL--LTQLLENLVVIGDMCYARQVFDEMHKP-RIFLWNTLF 81
Query: 117 RAFVDNRQFDRSLQLYAQMRELDINPDKFTFPFVLKACGYLRDIEFGVKVHKDAVDSGYW 176
+ +V N+ SL LY +MR+L + PD+FT+PFV+KA L D G +H V G+
Sbjct: 82 KGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFG 141
Query: 177 SDVFVGNSLIAMYGKCGRVDVCRQLFDEMPERNVVTWSSLTGAYAQNGCYEEGLLLFKRM 236
V L+ MY K G + LF+ M +++V W++ Q G L F +M
Sbjct: 142 CLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKM 201
Query: 237 MDEGIRPNR---VVILNAMACVRKVSEADDVCRVVVDNGLDLDQSLQNAAMVMYARCGRM 293
+ ++ + V +L+A + + +++ +D + ++NA + M+ +CG
Sbjct: 202 CADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNT 261
Query: 294 DMARRFFEGILNKDLVSWTSMIEAYAQADLPLEALEVYRQMILRRVLPDSVTFLGVIRAC 353
+ AR FE + +++VSW++MI YA EAL ++ M + P+ VTFLGV+ AC
Sbjct: 262 EAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSAC 321
Query: 354 SSLASFQQARTVHGIIIHCFLGNQLALD------TAVVDLYVKCGSLMHARKVFDRMK-Q 406
S + + +++ N L+ +VDL + G L A + +M +
Sbjct: 322 SHAGLVNEGKRYFSLMVQ---SNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVE 378
Query: 407 KNVISWSTMISGYGMH 422
+ W ++ +H
Sbjct: 379 PDTGIWGALLGACAVH 394
Score = 113 bits (282), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 82/271 (30%), Positives = 130/271 (47%), Gaps = 18/271 (6%)
Query: 79 LVTNLVSQYASLGSISHAFSLFSSVSDSCDLFLWNVMIRAFVDNRQFDRSLQLYAQMREL 138
+ T LV Y G +S A LF S+ DL WN + V +L+ + +M
Sbjct: 146 VATELVMMYMKFGELSSAEFLFESMQVK-DLVAWNAFLAVCVQTGNSAIALEYFNKMCAD 204
Query: 139 DINPDKFTFPFVLKACGYLRDIEFGVKVHKDAVDSGYWSDVFVGNSLIAMYGKCGRVDVC 198
+ D FT +L ACG L +E G +++ A ++ V N+ + M+ KCG +
Sbjct: 205 AVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAA 264
Query: 199 RQLFDEMPERNVVTWSSLTGAYAQNGCYEEGLLLFKRMMDEGIRPNRVVILNAMACVRKV 258
R LF+EM +RNVV+WS++ YA NG E L LF M +EG+RPN V L ++
Sbjct: 265 RVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHA 324
Query: 259 SEADDVCR----VVVDNGLDLDQSLQN-AAMV-MYARCGRMDMARRFFEGI-LNKDLVSW 311
++ R +V N +L+ ++ A MV + R G ++ A F + + + D W
Sbjct: 325 GLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIW 384
Query: 312 TSMIEAYAQADLPLEALEVYRQMILRRVLPD 342
+++ A A V+R MIL + + D
Sbjct: 385 GALLGACA----------VHRDMILGQKVAD 405
Score = 92.8 bits (229), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 131/295 (44%), Gaps = 27/295 (9%)
Query: 232 LFKRMMDEGIRPNRVVILNAMACVRKVSEADDVCRVVVDNGLDLDQSLQNAAMVMYARCG 291
L K+M+ E +R A K + + +V+ G SL + G
Sbjct: 8 LTKQMLSELLR----------ASSSKPKQLKKIHAIVLRTGFSEKNSLLTQLLENLVVIG 57
Query: 292 RMDMARRFFEGILNKDLVSWTSMIEAYAQADLPLEALEVYRQMILRRVLPDSVTFLGVIR 351
M AR+ F+ + + W ++ + Y + LP E+L +Y++M V PD T+ V++
Sbjct: 58 DMCYARQVFDEMHKPRIFLWNTLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVK 117
Query: 352 ACSSLASFQQARTVHGIIIHCFLGNQLALDTAVVDLYVKCGSLMHARKVFDRMKQKNVIS 411
A S L F +H ++ G + T +V +Y+K G L A +F+ M+ K++++
Sbjct: 118 AISQLGDFSCGFALHAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVA 177
Query: 412 WSTMISGYGMHGHGREALFLFDQMKA-LIKPDHITFVSVLSACSHAGLIDEGWECFNSML 470
W+ ++ G+ AL F++M A ++ D T VS+LSAC G ++ G E ++
Sbjct: 178 WNAFLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDR-- 235
Query: 471 RDFGVAPRPEHYACMV-------DMLGRAGKLNEAREFIERMPIRPDAGVWGSLL 518
R E C + DM + G AR E M R + W +++
Sbjct: 236 ------ARKEEIDCNIIVENARLDMHLKCGNTEAARVLFEEMKQR-NVVSWSTMI 283
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.326 0.138 0.426
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 244,711,661
Number of Sequences: 539616
Number of extensions: 9868228
Number of successful extensions: 39038
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 359
Number of HSP's successfully gapped in prelim test: 98
Number of HSP's that attempted gapping in prelim test: 30707
Number of HSP's gapped (non-prelim): 2056
length of query: 693
length of database: 191,569,459
effective HSP length: 125
effective length of query: 568
effective length of database: 124,117,459
effective search space: 70498716712
effective search space used: 70498716712
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 65 (29.6 bits)