Query 005513
Match_columns 693
No_of_seqs 131 out of 181
Neff 3.9
Searched_HMMs 13730
Date Tue Mar 26 19:02:16 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/005513.a3m -d /local_scratch/syshi/scop70.hhm -v 0 -o /local_scratch/syshi/H1_2018-2022//hhsearch_scop/005513hhsearch_scop
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2fh1a3 d.109.1.1 (A:629-741) 24.8 8.5 0.00062 14.3 0.4 45 204-250 12-57 (113)
2 d1svya_ d.109.1.1 (A:) Severin 18.6 14 0.001 12.9 0.5 43 204-250 4-46 (102)
3 d1uxxx_ b.18.1.10 (X:) Carbohy 12.3 28 0.002 11.1 3.4 20 258-277 105-124 (125)
4 d1d0na3 d.109.1.1 (A:263-383) 10.1 23 0.0017 11.7 -0.5 46 205-250 10-58 (121)
5 d1m98a2 d.17.4.6 (A:176-317) O 9.7 34 0.0025 10.6 4.2 122 117-283 18-140 (142)
6 d1t01a2 a.24.9.1 (A:126-252) V 9.3 35 0.0026 10.5 0.4 27 349-375 14-40 (127)
7 d1j72a3 d.109.1.1 (A:241-347) 8.6 27 0.002 11.2 -0.5 37 212-248 16-55 (107)
8 d1od3a_ b.18.1.10 (A:) Putativ 7.3 43 0.0032 10.0 3.4 20 258-277 112-131 (132)
9 d1uy4a_ b.18.1.10 (A:) Putativ 6.1 54 0.004 9.4 3.4 20 258-277 112-131 (132)
10 d2dsxa1 g.41.5.1 (A:1-52) Rubr 6.0 55 0.004 9.3 2.2 34 163-197 12-50 (52)
No 1
>d2fh1a3 d.109.1.1 (A:629-741) Gelsolin {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.84 E-value=8.5 Score=14.28 Aligned_cols=45 Identities=22% Similarity=0.136 Sum_probs=29.9
Q ss_pred HHHHHHHHHCCCCEEEEEE-CCCCCEECCCCCEEEEECCEEEEEEECC
Q ss_conf 6899998405831589861-8985100489958999582699999418
Q 005513 204 PRLNEIKFGSGVIDELMFL-DLPRECRFPSGIMMLEYGKAVQESVYEQ 250 (693)
Q Consensus 204 PRfF~t~FeSGV~~iqL~L-d~prE~~LpNGsivIEs~KAs~~y~YeG 250 (693)
||+|+....+|......+. +..++...++..++|+|...+ |++-|
T Consensus 12 prLf~~~~~~g~~~~~ev~~~~~q~dL~s~dvfILD~g~~i--fvW~G 57 (113)
T d2fh1a3 12 PRLFACSNKIGRFVIEEVPGELMQEDLATDDVMLLDTWDQV--FVWVG 57 (113)
T ss_dssp CEEEEEECTTSSCEEEEECSSCCGGGSCTTSEEEEECSSCE--EEEEC
T ss_pred CEEEEEECCCCCEEEEEECCCCCHHHCCCCCEEEEECCCEE--EEEEC
T ss_conf 87999986999899999725778878797766999789978--99968
No 2
>d1svya_ d.109.1.1 (A:) Severin, domain 2 {Dictyostelium discoideum [TaxId: 44689]}
Probab=18.58 E-value=14 Score=12.90 Aligned_cols=43 Identities=16% Similarity=0.143 Sum_probs=23.4
Q ss_pred HHHHHHHHHCCCCEEEEEECCCCCEECCCCCEEEEECCEEEEEEECC
Q ss_conf 68999984058315898618985100489958999582699999418
Q 005513 204 PRLNEIKFGSGVIDELMFLDLPRECRFPSGIMMLEYGKAVQESVYEQ 250 (693)
Q Consensus 204 PRfF~t~FeSGV~~iqL~Ld~prE~~LpNGsivIEs~KAs~~y~YeG 250 (693)
||+|++.....+.-.++ +...+...++++++|++... +|++-|
T Consensus 4 pRL~~v~G~~~~~~~ev--~~~~~~L~s~dvfILd~~~~--iyvW~G 46 (102)
T d1svya_ 4 PRLLHISGDKNAKVAEV--PLATSSLNSGDCFLLDAGLT--IYQFNG 46 (102)
T ss_dssp CEEEEEECTTSCEEEEE--CSSGGGCBTTSEEEEECSSE--EEEEEC
T ss_pred CEEEEEECCCCEEEEEE--CCCHHHCCCCCEEEEECCCE--EEEEEC
T ss_conf 67999989984599995--59989939998699974997--899989
No 3
>d1uxxx_ b.18.1.10 (X:) Carbohydrate binding module from xylanase U {Clostridium thermocellum [TaxId: 1515]}
Probab=12.28 E-value=28 Score=11.14 Aligned_cols=20 Identities=20% Similarity=0.401 Sum_probs=17.0
Q ss_pred EEEEEECCCCCEEEEEEEEC
Q ss_conf 89998576662578898642
Q 005513 258 QLRIIFTNDLKILSWEFCAR 277 (693)
Q Consensus 258 qLRiiFd~dLKIEslEF~~r 277 (693)
.||+.|+-.+.|+||+|...
T Consensus 105 ~l~l~~~g~~Nid~~~F~~~ 124 (125)
T d1uxxx_ 105 DLYLVFSGPVNIDYFIFDSN 124 (125)
T ss_dssp EEEEEESSCCEEEEEEEECC
T ss_pred EEEEEEECCCEEEEEEEEEC
T ss_conf 99999968860788999808
No 4
>d1d0na3 d.109.1.1 (A:263-383) Gelsolin {Horse (Equus caballus) [TaxId: 9796]}
Probab=10.06 E-value=23 Score=11.66 Aligned_cols=46 Identities=20% Similarity=0.290 Sum_probs=26.2
Q ss_pred HHHHHHHHCCCCEEEEEECC-C--CCEECCCCCEEEEECCEEEEEEECC
Q ss_conf 89999840583158986189-8--5100489958999582699999418
Q 005513 205 RLNEIKFGSGVIDELMFLDL-P--RECRFPSGIMMLEYGKAVQESVYEQ 250 (693)
Q Consensus 205 RfF~t~FeSGV~~iqL~Ld~-p--rE~~LpNGsivIEs~KAs~~y~YeG 250 (693)
|+|+..-.+|...+..+.+. | ++...++++++|+|..-..+|+..|
T Consensus 10 rLy~vs~~~G~~~~~~v~~~~p~~~s~L~s~dvfILD~~~e~~IyvW~G 58 (121)
T d1d0na3 10 KLYKVSNGAGPMVVSLVADENPFAQGALRSEDCFILDHGKDGKIFVWKG 58 (121)
T ss_dssp EEEEEECSSSSCEEEEEESSSSBCGGGCCTTSEEEEEEGGGTEEEEEEC
T ss_pred EEEEEECCCCCEEEEEECCCCCCCHHHCCCCCEEEEEECCCCEEEEEEC
T ss_conf 7889988999889999725787688897999879996078888999738
No 5
>d1m98a2 d.17.4.6 (A:176-317) Orange carotenoid protein, C-terminal domain {Cyanobacteria (Arthrospira maxima) [TaxId: 129910]}
Probab=9.71 E-value=34 Score=10.60 Aligned_cols=122 Identities=13% Similarity=0.047 Sum_probs=63.6
Q ss_pred CHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE
Q ss_conf 50577999999999728999996368999999764999727898303478787755556311110000034599888415
Q 005513 117 SGVCARRLMQYLYHQRQRPPDNTIAYWRKFVAEYYSPRAKKRWCLSLYDNVGHHALGVFPQAAMDAWQCDICGSKSGRGF 196 (693)
Q Consensus 117 ~G~c~lRLlQfiehLs~rp~~ndIeYWrkFV~EFFSP~AvlR~tls~~d~~g~~s~GvfP~~a~d~W~cdic~sk~~K~F 196 (693)
.|..---+..|.+.++. .|++- +.+.|+++|++. ++ ..+.+
T Consensus 18 ~~i~~~~V~~Y~~a~na----~D~d~----~~~lFa~Dav~~------~P-------------------------~~~p~ 58 (142)
T d1m98a2 18 EGVTNSTVLQYMDNLNA----NDFDN----LISLFAEDGALQ------PP-------------------------FQKPI 58 (142)
T ss_dssp BTBCCHHHHHHHHHHHT----TCHHH----HHTTEEEEEEEE------CT-------------------------TSCCE
T ss_pred CCCCHHHHHHHHHHHHC----CCHHH----HHHHCCCCEEEE------CC-------------------------CCCCC
T ss_conf 21229999999999866----89999----998747875996------89-------------------------87652
Q ss_pred EECCCCHHHHHHHHHHCCCCEEEEEECCCCCEECCCCCEEEEECCEEEEEEECCEEEEEEEEEEEEECCCCCEEEEEEEE
Q ss_conf 88631046899998405831589861898510048995899958269999941839999778999857666257889864
Q 005513 197 EATFEVLPRLNEIKFGSGVIDELMFLDLPRECRFPSGIMMLEYGKAVQESVYEQLRIVREGQLRIIFTNDLKILSWEFCA 276 (693)
Q Consensus 197 EIt~~vLPRfF~t~FeSGV~~iqL~Ld~prE~~LpNGsivIEs~KAs~~y~YeGs~Vv~~GqLRiiFd~dLKIEslEF~~ 276 (693)
.+...|-+||..... |+..... ....+. ..+|...+...--+..-| .|..+..+..=+-.|+.+-||-++++..
T Consensus 59 -~G~eaI~~f~~~~~~-~~~~~p~--~g~~~~-~~~g~~~v~vtgkV~~~~-~G~~~~vn~a~~F~ln~~GkI~~v~i~l 132 (142)
T d1m98a2 59 -VGKENTLRFFREECQ-NLKLIPE--RGVSEP-TEDGYTQIKVTGKVQTPW-FGGNVGMNIAWRFLLNPENKVFFVAIDL 132 (142)
T ss_dssp -ESHHHHHHHHHHHCT-TCEEEEE--EEEEEE-CGGGCEEEEEEEEEECTT-TGGGCCEEEEEEEEECTTSCEEEEEEEE
T ss_pred -CCHHHHHHHHHHHCC-CCEECCC--CEEEEE-ECCCCEEEEEEEEEECCC-CCCCEEEEEEEEEEECCCCCEEEEEEEH
T ss_conf -199999999998602-4244453--204676-058957999988986577-8841500158999999998299999614
Q ss_pred C-CEECCC
Q ss_conf 2-300134
Q 005513 277 R-RHEELL 283 (693)
Q Consensus 277 r-sHEEyI 283 (693)
. +=+|++
T Consensus 133 lasp~el~ 140 (142)
T d1m98a2 133 LASPKELL 140 (142)
T ss_dssp BSSGGGGG
T ss_pred HCCHHHHH
T ss_conf 32999884
No 6
>d1t01a2 a.24.9.1 (A:126-252) Vinculin {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=9.30 E-value=35 Score=10.51 Aligned_cols=27 Identities=30% Similarity=0.502 Sum_probs=20.6
Q ss_pred HHHHHHHHHHHHHHCHHHHHHHHHHHC
Q ss_conf 544647669999841398999989719
Q 005513 349 KRYVRCLQISEVVSSMKDLINFCWEQK 375 (693)
Q Consensus 349 k~vMRcLQIaEVMSqMKdLM~FSk~Nn 375 (693)
+.+..+|...|+++.|.||..|-+.-+
T Consensus 14 ~~V~~~L~~~e~v~s~~dLv~~~k~f~ 40 (127)
T d1t01a2 14 KGILEYLTVAEVVETMEDLVTYTKNLG 40 (127)
T ss_dssp HHHHHHHTTTTTCCSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHH
T ss_conf 999999999996488999999999988
No 7
>d1j72a3 d.109.1.1 (A:241-347) Macrophage capping protein Cap G {Human (Homo sapiens) [TaxId: 9606]}
Probab=8.64 E-value=27 Score=11.20 Aligned_cols=37 Identities=14% Similarity=0.191 Sum_probs=20.4
Q ss_pred HCCCCEEEEEECC---CCCEECCCCCEEEEECCEEEEEEE
Q ss_conf 0583158986189---851004899589995826999994
Q 005513 212 GSGVIDELMFLDL---PRECRFPSGIMMLEYGKAVQESVY 248 (693)
Q Consensus 212 eSGV~~iqL~Ld~---prE~~LpNGsivIEs~KAs~~y~Y 248 (693)
.+|..++..+-+. .++...++.+++|+|.....+|+.
T Consensus 16 ~~G~~~~~~v~~~~p~~~~~L~s~dvfILD~~~~~~iyvW 55 (107)
T d1j72a3 16 ATGQMNLTKVADSSPFALELLISDDCFVLDNGLCGKIYIW 55 (107)
T ss_dssp TTSSCEEEEEECSSSBCGGGCCTTSEEEEECGGGSEEEEE
T ss_pred CCCCEEEEEEECCCCCCHHHCCCCCEEEEECCCCCEEEEE
T ss_conf 9998999998417866888979988899932678889998
No 8
>d1od3a_ b.18.1.10 (A:) Putative xylanase {Clostridium stercorarium [TaxId: 1510]}
Probab=7.29 E-value=43 Score=9.95 Aligned_cols=20 Identities=10% Similarity=0.374 Sum_probs=16.5
Q ss_pred EEEEEECCCCCEEEEEEEEC
Q ss_conf 89998576662578898642
Q 005513 258 QLRIIFTNDLKILSWEFCAR 277 (693)
Q Consensus 258 qLRiiFd~dLKIEslEF~~r 277 (693)
.||+.|+..+.|+||+|.-.
T Consensus 112 ~l~l~~~g~~nld~~~f~~~ 131 (132)
T d1od3a_ 112 DIVLVFSGPVNVDWFVFSKS 131 (132)
T ss_dssp EEEEEESSCCEEEEEEEECC
T ss_pred EEEEEEECCCEEEEEEEEEC
T ss_conf 99999958824888999968
No 9
>d1uy4a_ b.18.1.10 (A:) Putative xylanase {Clostridium stercorarium [TaxId: 1510]}
Probab=6.13 E-value=54 Score=9.36 Aligned_cols=20 Identities=10% Similarity=0.428 Sum_probs=16.5
Q ss_pred EEEEEECCCCCEEEEEEEEC
Q ss_conf 89998576662578898642
Q 005513 258 QLRIIFTNDLKILSWEFCAR 277 (693)
Q Consensus 258 qLRiiFd~dLKIEslEF~~r 277 (693)
.||+.|+..+.|+||.|.-.
T Consensus 112 ~l~l~~~g~~nid~~~F~~~ 131 (132)
T d1uy4a_ 112 DIVLVFSGPVNVDNFIFSRS 131 (132)
T ss_dssp EEEEEESSCCEEEEEEEEEC
T ss_pred EEEEEEECCCEEEEEEEEEC
T ss_conf 99999978833887999968
No 10
>d2dsxa1 g.41.5.1 (A:1-52) Rubredoxin {Desulfovibrio gigas [TaxId: 879]}
Probab=6.04 E-value=55 Score=9.31 Aligned_cols=34 Identities=35% Similarity=0.811 Sum_probs=21.5
Q ss_pred CCCC-CCCCCCCCCCCCC----CCCCCCCCCCCCCCCEEE
Q ss_conf 3478-7877555563111----100000345998884158
Q 005513 163 LYDN-VGHHALGVFPQAA----MDAWQCDICGSKSGRGFE 197 (693)
Q Consensus 163 ~~d~-~g~~s~GvfP~~a----~d~W~cdic~sk~~K~FE 197 (693)
.||. .|-...|+-|.+. ++.|.|-+|+.. -..||
T Consensus 12 iYdp~~Gd~~~gi~pGT~F~~LP~~w~CP~C~a~-K~~F~ 50 (52)
T d2dsxa1 12 EYDPAKGDPDSGIKPGTKFEDLPDDWACPVCGAS-KDAFE 50 (52)
T ss_dssp EECTTTCBGGGTBCTTCCGGGSCTTCBCTTTCCB-GGGEE
T ss_pred EECCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCC-HHHHC
T ss_conf 8775548835587999997888997899299891-89940
Done!