Query 005519
Match_columns 692
No_of_seqs 385 out of 3685
Neff 8.4
Searched_HMMs 29240
Date Tue Mar 26 18:10:01 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/005519.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_2027-2031//hhsearch_pdb/005519hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3m7h_A Putidacin L1; monocot m 1.0 1 1 332.4 11.0 231 38-301 11-255 (276)
2 1dlp_A Lectin scafet precursor 1.0 1 1 286.5 13.5 216 39-285 6-229 (236)
3 4asz_A BDNF/NT-3 growth factor 1.0 1 1 264.8 12.7 167 523-692 11-193 (299)
4 4aoj_A High affinity nerve gro 1.0 1 1 264.4 16.0 167 523-692 39-223 (329)
5 4gt4_A Tyrosine-protein kinase 1.0 1 1 259.9 15.5 165 525-692 26-210 (308)
6 4fie_A Serine/threonine-protei 1.0 1 1 257.7 19.6 161 523-692 149-310 (423)
7 4fih_A Serine/threonine-protei 1.0 1 1 256.5 17.9 160 524-692 73-233 (346)
8 4b9d_A Serine/threonine-protei 1.0 1 1 255.9 13.8 162 525-692 24-188 (350)
9 4aw0_A HPDK1, 3-phosphoinositi 1.0 1 1 254.5 16.2 162 525-692 32-197 (311)
10 3omv_A RAF proto-oncogene seri 1.0 1 1 253.5 13.9 164 521-692 32-197 (307)
No 1
>3m7h_A Putidacin L1; monocot mannose-binding lectin, bacteriocin, LLPA, pseudomon bacterial toxin, siras, antimicrobial protein; 2.20A {Pseudomonas SP} PDB: 3m7j_A*
Probab=1.00 E-value=1 Score=332.42 Aligned_cols=231 Identities=20% Similarity=0.217 Sum_probs=176.7
Q ss_pred CCCCCCCCCCCCCCCCCEEEECCCEEEEEEECCCCCCCEEEEEEECCCC-CCEEEECCCCCCCCCC----CCEEEEEECC
Q ss_conf 0012102899833699979708995899775899999829999954899-9269973599988899----7339995078
Q 005519 38 SLAADTLTPTTLIRDGETLVSPSQRFELGFFSPGKSQNRYVGIWYQQIP-DTVVWVANRNSPIVDK----NGVLTVSNRG 112 (692)
Q Consensus 38 ~~~~~~l~~g~~l~~~~~l~S~~g~f~lgf~~~~~~~~~~l~iw~~~~~-~t~vW~anr~~pv~~~----~~~l~l~~~G 112 (692)
+++.|+|.+|++|.++++|+|++|+|+||||+++ ++|| |+ + + +||+|||+.|+.++ +++|+|+.+|
T Consensus 11 ~~~~~~l~~g~~l~~~~~l~S~~g~F~lgf~~~~---~~~l---y~--~~~-vvW~Anr~~p~~~~~~~~~~~l~l~~~G 81 (276)
T 3m7h_A 11 GVGTSVLPAYQTLSAGQYLLSPNQRFKLLLQGDG---NLVI---QD--NGA-TVWVANEQQPFSSTIPLRNKKAPLAFYV 81 (276)
T ss_dssp CTTSSEECTTEEBCTTCEEECTTSSEEEEECTTS---CEEE---EE--TTE-EEEECSTTSTTEEEEECCCTTCCSEEEE
T ss_pred CCCCCEECCCCEECCCCEEECCCCCEEEEEECCC---CEEE---EC--CCC-EEEECCCCCCCCCCCCCCCEEEEEECCC
T ss_conf 4447874699876699989809995899997899---7699---87--997-2998988877677555653289995798
Q ss_pred EEEE--EECCCCEEEEEECCCC-----CCCCEEEEECCCCEEEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCCEECCC
Q ss_conf 0999--9089976999404678-----67836899349987998289998877401111278863223453022020369
Q 005519 113 NLVL--LNQSNGTIWSSNVSRE-----VKNPVAQLLDNGNLVIRDNSGSNSTESYLWQSFDYPTDTMLQGMKLGWDLRTG 185 (692)
Q Consensus 113 ~lvl--~~~~~~~~w~s~~~~~-----~~~~~~~l~d~GNlvl~~~~~~~~~~~~~WQSFd~PTDTlLpgq~l~~~~~~g 185 (692)
+||| .|+++.+||+|++... ..+..|+|+|+|||||++ +.++||| |||||+||||+++.+.++|
T Consensus 82 ~Lvl~~~~~~~~~vWst~~~~~~~~~~~~~~~a~L~d~GNlVl~~-------~~~lWqS--~ptdtlLpg~~~~~~l~~g 152 (276)
T 3m7h_A 82 QYGAFLDDYSRRRVWLTDNSTFTSNDQWNRTHLVLQDDGNIVLVD-------SLALWNG--TPAIPLVPGAIDSLLLAPG 152 (276)
T ss_dssp SSSEEEEEGGGTEEEEECCCCCCCTTHHHHEEEEECTTSCEEEEE-------EEEEEES--CTTSCCCCSCTTCEEECSS
T ss_pred CEEEEEECCCCCEEEEECCCCCCCCCCCCCEEEEEECCCCEEECC-------CCEEECC--CCCCCCCCCCCCCCCCCCC
T ss_conf 699987579997899847876545556786699994899989548-------9521175--4331402454112111258
Q ss_pred CEEEEEECCCCCCCCCCCEEEEECCCCCCEEEEEC-CCEEEEECCCCCCCCCCCCCCCCCEEEECEEEEECC-EEEEEEE
Q ss_conf 60158962889999995239965178774999991-985665328889943357898850022208987079-0699999
Q 005519 186 LERYQTSWKSADDPSPGNFTHRLDIHVLPQVCVYN-GSAKYTCTGPWNGVAFGSAPSNTTFIFQPIVVQNKD-EVYYMYE 263 (692)
Q Consensus 186 ~~~~L~Sw~s~~dps~G~ysl~~~~~g~~~~~~~~-~~~~y~~~g~w~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 263 (692)
.. | ++.+||++|.|++.|+++|. +++++ ++.+||++|+|++...... + .....+.+.++.+ .+++++.
T Consensus 153 ~~--L---~S~~dps~G~fsl~l~~dGn--lvLy~~~~~~yW~Sgt~~~~~~~l~--l-~~dGnLvl~d~~~~~vWsS~t 222 (276)
T 3m7h_A 153 SE--L---VQGVVYGAGASKLVFQGDGN--LVAYGPNGAATWNAGTQGKGAVRAV--F-QGDGNLVVYGAGNAVLWHSHT 222 (276)
T ss_dssp EE--E---CTTCEEEETTEEEEECTTSC--EEEECTTSSEEEECCCTTTTCCEEE--E-CTTSCEEEECTTSCEEEECSC
T ss_pred CC--C---CCCCCCCCCEEEEEECCCCE--EEEEECCCEEEEECCCCCCCCEEEE--E-CCCCEEEEEECCCCEEEEECC
T ss_conf 63--2---24898889527885658825--9999599969998889898448999--9-588769999599968998317
Q ss_pred ECCCCCEEEEEECCCCCEEEEEEEECCCCEEEEEEECC
Q ss_conf 23999089999922896999996607997599997179
Q 005519 264 SYSSPIIMILRVNPLGQVQRLIWHEMSTGWQVFFTAPD 301 (692)
Q Consensus 264 ~~~~~~~~rl~Ld~dG~l~~~~w~~~~~~W~~~~~~~~ 301 (692)
.....+|++|+.||+|++|.| ...|..++..|.
T Consensus 223 --~~~~~~rl~Ld~dGnLvly~~---~~~Wqsf~~~P~ 255 (276)
T 3m7h_A 223 --GGHASAVLRLQANGSIAILDE---KPVWARFGFQPT 255 (276)
T ss_dssp --TTCTTCEEEECTTSCEEEEEE---EEEEESSSCCTT
T ss_pred --CCCCCEEEEECCCCCEEEECC---CCEEECCCCCCC
T ss_conf --998888999968942999838---886772574577
No 2
>1dlp_A Lectin scafet precursor; two-domain lectin, beta prism II fold, native, sugar binding protein; 3.30A {Hyacinthoides hispanica} SCOP: b.78.1.1 b.78.1.1
Probab=1.00 E-value=1 Score=286.53 Aligned_cols=216 Identities=14% Similarity=0.177 Sum_probs=163.5
Q ss_pred CCCCCCCCCCCCCCCCEEEECCCEEEEEEECCCCCCCEEEEEEECCCCCCEEEECCCCCCCCCCCCEEEEEECCEEEEEE
Q ss_conf 01210289983369997970899589977589999982999995489992699735999888997339995078099990
Q 005519 39 LAADTLTPTTLIRDGETLVSPSQRFELGFFSPGKSQNRYVGIWYQQIPDTVVWVANRNSPIVDKNGVLTVSNRGNLVLLN 118 (692)
Q Consensus 39 ~~~~~l~~g~~l~~~~~l~S~~g~f~lgf~~~~~~~~~~l~iw~~~~~~t~vW~anr~~pv~~~~~~l~l~~~G~lvl~~ 118 (692)
++.|+|.+|++|.++++| ++|.|+|||+.+++ + ++|.. .|+||+|||+.| .+++|+|+.||||||+|
T Consensus 6 ~~~~~i~~g~~L~~g~~l--~~g~f~l~f~~~gn-----l-~ly~~--~~~vW~an~~~~---~~~~l~l~~dGnLvl~d 72 (236)
T 1dlp_A 6 GLSHEGSHPQTLHAAQSL--ELSSFRFTMQSDCN-----L-VLFDS--DVRVWASNTAGA---TGCRAVLQSDGLLVILT 72 (236)
T ss_dssp CSSSSSCSCSCCCTTCEE--CSTTEEEEECTTSC-----E-EEEES--SSEEECCCCCSC---SCCBCCBCSSSCBCCBC
T ss_pred ECCCEECCCCEECCCCEE--ECCCEEEEECCCCC-----E-EEEEC--CEEEEECCCCCC---CCEEEEECCCCCEEEEC
T ss_conf 026522899998999998--75979999878996-----9-99989--999997999988---88699995898199993
Q ss_pred CCCCEEEEEECCCCCCCCEEEEECCCCEEEEECCCCCCCCCCEEEECCCCCCCC-CCCCCCCCEE-CCCC-----EEEEE
Q ss_conf 899769994046786783689934998799828999887740111127886322-3453022020-3696-----01589
Q 005519 119 QSNGTIWSSNVSREVKNPVAQLLDNGNLVIRDNSGSNSTESYLWQSFDYPTDTM-LQGMKLGWDL-RTGL-----ERYQT 191 (692)
Q Consensus 119 ~~~~~~w~s~~~~~~~~~~~~l~d~GNlvl~~~~~~~~~~~~~WQSFd~PTDTl-Lpgq~l~~~~-~~g~-----~~~L~ 191 (692)
+++.++|+|++........|+|+|+|||||++ .++||||||||||+ ||+| +.+. .+|. ++.|+
T Consensus 73 ~~~~~vW~s~~~~~~~~~~~~l~d~Gnlvl~~--------~~~W~S~~~p~~t~~lp~~--g~d~L~~gq~~~~~~~~L~ 142 (236)
T 1dlp_A 73 AQNTIRWSSGTKGSIGNYVLVLQPDRTVTIYG--------PGLWDSGTSNKGSVVVANN--GNSILYSTQGNDNHPQTLH 142 (236)
T ss_dssp TTTCCSCCCCCCCCSSCCEEEECSSSCEEEEC--------SEEEECSCCCSSCCCCSSC--CCEECCCC--CCCCCCEEC
T ss_pred CCCCEEEECCCCCCCCCEEEEEECCCCEEEEC--------CCEEECCCCCCCCCCCCCC--CCEEEECCCCCCCCCCEEE
T ss_conf 89967984786256876799992799899945--------8888789989865013776--5208866875777662687
Q ss_pred ECCCCCCCCCCCEEEEECCCCCCEEEEECCCEEEEECCCCCCCCCCCCCCCCCEEEECEEEEECC-EEEEEEEECCCCCE
Q ss_conf 62889999995239965178774999991985665328889943357898850022208987079-06999992399908
Q 005519 192 SWKSADDPSPGNFTHRLDIHVLPQVCVYNGSAKYTCTGPWNGVAFGSAPSNTTFIFQPIVVQNKD-EVYYMYESYSSPII 270 (692)
Q Consensus 192 Sw~s~~dps~G~ysl~~~~~g~~~~~~~~~~~~y~~~g~w~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 270 (692)
+.+||++|.|+|.++++| +++++++..+||++++|++. +...+.+.... .+.+.+.++ +++.+|..... ..
T Consensus 143 ---s~~d~s~G~~~l~l~~dG--~LvL~~~~~~~W~s~~~~~~-~~~~~~L~~~G-nl~ly~~~~~~vw~s~~~~~~-~~ 214 (236)
T 1dlp_A 143 ---ATQSLQLSPYRLSMETDC--NLVLFDRDDRVWSTNTAGKG-TGCRAVLQPNG-RMDVLTNQNIAVWTSGNSRSA-GR 214 (236)
T ss_dssp ---SSCCCBCSSCEEEEETTT--EEEEEBTTBCCSCCCCCSSC-SSCEEEEETTT-EEEEEETTTEEEEECCCCCSS-SC
T ss_pred ---CCCEEECCCEEEEECCCC--CEEEECCCEEEEECCCCCCC-CCEEEEECCCC-CEEEEECCCCEEEEECCCCCC-CC
T ss_conf ---683720685899987898--68997699859818973898-85499997898-499994998489995887888-87
Q ss_pred EEEEECCCCCEEEEE
Q ss_conf 999992289699999
Q 005519 271 MILRVNPLGQVQRLI 285 (692)
Q Consensus 271 ~rl~Ld~dG~l~~~~ 285 (692)
+|++||+||++++|.
T Consensus 215 ~rl~Ld~dG~l~ly~ 229 (236)
T 1dlp_A 215 YVFVLQPDRNLAIYG 229 (236)
T ss_dssp CEEEECSSSCEEEEC
T ss_pred EEEEECCCCCEEEEC
T ss_conf 899993798389969
No 3
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=1.00 E-value=1 Score=264.83 Aligned_cols=167 Identities=31% Similarity=0.511 Sum_probs=143.5
Q ss_pred HCCCCCEEEEECCCCCEEEEEEEEC------CCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEECCEE
Q ss_conf 4189536556421382749999955------9949999990457874588899999999827999800068899969959
Q 005519 523 ATENFSIQSKLGEGGFGPVYKGRLL------NGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEK 596 (692)
Q Consensus 523 ~~~~f~~~~~iG~G~fG~Vyk~~~~------~~~~VAVK~l~~~~~~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~ 596 (692)
..++|.+.++||+|+||+||+|.+. ++..||||+++.......++|.+|+.++.+++|||||+++|+|.+.+..
T Consensus 11 ~r~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~ 90 (299)
T 4asz_A 11 KRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPL 90 (299)
T ss_dssp CGGGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSE
T ss_pred CHHHEEEEEEEEECCCCEEEEEEECCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCEE
T ss_conf 88892982498207882999999877666778879999996777858999999999999858998886287999569989
Q ss_pred EEEEECCCCCCHHHHHCCC----------CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEECCCCCE
Q ss_conf 9999736789976884299----------987778999999999999999999885699956843778996798699956
Q 005519 597 ILIYEYMVNKSLDVFLFDP----------TKKHLLGWQLRVRIIDGIAQGLLYLHQYSRLRIIHRDLKASNILLDQHMNP 666 (692)
Q Consensus 597 ~lV~Ey~~~gsL~~~l~~~----------~~~~~l~~~~~~~i~~~ia~al~yLH~~~~~~ivHrDikp~NILl~~~~~~ 666 (692)
++||||+++|+|.++|+.. .....++|..++.|+.|+|.||.|||+++ |+||||||+|||+++++.+
T Consensus 91 ~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~---iiHRDlKp~NILl~~~~~~ 167 (299)
T 4asz_A 91 IMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQH---FVHRDLATRNCLVGENLLV 167 (299)
T ss_dssp EEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCE
T ss_pred EEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC---CCCCCCCHHHEEECCCCCE
T ss_conf 9999858999689999860864211123577788999999999999999999997599---0467657763898799868
Q ss_pred EEEEECCCEECCCCCCCCCCCCEECC
Q ss_conf 99720772310898655686612159
Q 005519 667 KISDFGMARMFGGDELQGNTKRIVGT 692 (692)
Q Consensus 667 ki~DFGla~~~~~~~~~~~~~~~~Gt 692 (692)
||+|||+|+.+........+....||
T Consensus 168 Ki~DFGla~~~~~~~~~~~~~~~~gt 193 (299)
T 4asz_A 168 KIGDFGMSRDVYSTDYYRVGGHTMLP 193 (299)
T ss_dssp EECCCSCHHHHTGGGCEEETTTEEEC
T ss_pred EECCCCCCEECCCCCCEEECCCEECC
T ss_conf 98873001006788741664751347
No 4
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=1.00 E-value=1 Score=264.42 Aligned_cols=167 Identities=31% Similarity=0.501 Sum_probs=143.6
Q ss_pred HCCCCCEEEEECCCCCEEEEEEEEC------CCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEECCEE
Q ss_conf 4189536556421382749999955------9949999990457874588899999999827999800068899969959
Q 005519 523 ATENFSIQSKLGEGGFGPVYKGRLL------NGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEK 596 (692)
Q Consensus 523 ~~~~f~~~~~iG~G~fG~Vyk~~~~------~~~~VAVK~l~~~~~~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~ 596 (692)
..++|.+.++||+|+||+||+|.+. ++..||||+++.......++|.+|+.++.+++|||||+++|+|.+.+..
T Consensus 39 ~~~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~ 118 (329)
T 4aoj_A 39 KRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPL 118 (329)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSE
T ss_pred CHHHEEEEEEECCCCCCEEEEEEECCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCEE
T ss_conf 78992887797147784899899878665778969999997757979999999999999858998999698999989989
Q ss_pred EEEEECCCCCCHHHHHCCCC------------CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEECCCC
Q ss_conf 99997367899768842999------------877789999999999999999998856999568437789967986999
Q 005519 597 ILIYEYMVNKSLDVFLFDPT------------KKHLLGWQLRVRIIDGIAQGLLYLHQYSRLRIIHRDLKASNILLDQHM 664 (692)
Q Consensus 597 ~lV~Ey~~~gsL~~~l~~~~------------~~~~l~~~~~~~i~~~ia~al~yLH~~~~~~ivHrDikp~NILl~~~~ 664 (692)
+|||||+++|+|.++|+... ....++|..++.|+.|+|.||.|||+.+ ||||||||+||||++++
T Consensus 119 ~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~---iiHRDLKp~NILl~~~~ 195 (329)
T 4aoj_A 119 LMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLH---FVHRDLATRNCLVGQGL 195 (329)
T ss_dssp EEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEETTT
T ss_pred EEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC---EECCCCCHHHEEECCCC
T ss_conf 999982799939999986075410012211245788999999999999999999984088---42266667648988999
Q ss_pred CEEEEEECCCEECCCCCCCCCCCCEECC
Q ss_conf 5699720772310898655686612159
Q 005519 665 NPKISDFGMARMFGGDELQGNTKRIVGT 692 (692)
Q Consensus 665 ~~ki~DFGla~~~~~~~~~~~~~~~~Gt 692 (692)
.+||+|||+|+.+........+....||
T Consensus 196 ~~Ki~DFGla~~~~~~~~~~~~~~~~gt 223 (329)
T 4aoj_A 196 VVKIGDFGMSRDIYSTDYYRVGGRTMLP 223 (329)
T ss_dssp EEEECCCC----------------CCCC
T ss_pred CEEECCCCCCEECCCCCCCEECCCCCCC
T ss_conf 6897666033365678753004764556
No 5
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=1.00 E-value=1 Score=259.87 Aligned_cols=165 Identities=33% Similarity=0.488 Sum_probs=139.9
Q ss_pred CCCCEEEEECCCCCEEEEEEEEC------CCCEEEEEECCCCC-CCCHHHHHHHHHHHHHCCCCCCCEEEEEEEECCEEE
Q ss_conf 89536556421382749999955------99499999904578-745888999999998279998000688999699599
Q 005519 525 ENFSIQSKLGEGGFGPVYKGRLL------NGQEVAVKRLSNQS-GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKI 597 (692)
Q Consensus 525 ~~f~~~~~iG~G~fG~Vyk~~~~------~~~~VAVK~l~~~~-~~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~ 597 (692)
.++.+.++||+|+||+||+|.+. +++.||||+++... ....++|.+|+.++.+++|||||+++|+|.+.+..+
T Consensus 26 ~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~ 105 (308)
T 4gt4_A 26 SAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLS 105 (308)
T ss_dssp GGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred HHCEEEEEECCCCCCEEEEEEECCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCEEE
T ss_conf 88858669135888489999985776588886999999880149689999999999998589989877364998899889
Q ss_pred EEEECCCCCCHHHHHCCCC-------------CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEECCCC
Q ss_conf 9997367899768842999-------------877789999999999999999998856999568437789967986999
Q 005519 598 LIYEYMVNKSLDVFLFDPT-------------KKHLLGWQLRVRIIDGIAQGLLYLHQYSRLRIIHRDLKASNILLDQHM 664 (692)
Q Consensus 598 lV~Ey~~~gsL~~~l~~~~-------------~~~~l~~~~~~~i~~~ia~al~yLH~~~~~~ivHrDikp~NILl~~~~ 664 (692)
|||||+++|+|.++|.... ....++|..+++|+.|+|.||.|||+.+ ||||||||+|||+++++
T Consensus 106 lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~---iiHRDLK~~NILl~~~~ 182 (308)
T 4gt4_A 106 MIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHH---VVHKDLATRNVLVYDKL 182 (308)
T ss_dssp EEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGG
T ss_pred EEEECCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC---CCCCCCCCCCEEECCCC
T ss_conf 999818999499999862765433332211112468999999999999999999998689---97787362306887999
Q ss_pred CEEEEEECCCEECCCCCCCCCCCCEECC
Q ss_conf 5699720772310898655686612159
Q 005519 665 NPKISDFGMARMFGGDELQGNTKRIVGT 692 (692)
Q Consensus 665 ~~ki~DFGla~~~~~~~~~~~~~~~~Gt 692 (692)
.+||+|||+|+.+........+....||
T Consensus 183 ~~Ki~DFGlar~~~~~~~~~~~~~~~gt 210 (308)
T 4gt4_A 183 NVKISDLGLFREVYAADYYKLLGNSLLP 210 (308)
T ss_dssp CEEECCSCCBCGGGGGGCBCSSSSSCBC
T ss_pred CEEECCCCCCEECCCCCCEEEECCCCCC
T ss_conf 7898876020233677740473451257
No 6
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=1.00 E-value=1 Score=257.65 Aligned_cols=161 Identities=26% Similarity=0.378 Sum_probs=142.6
Q ss_pred HCCCCCEEEEECCCCCEEEEEEEECC-CCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEECCEEEEEEE
Q ss_conf 41895365564213827499999559-94999999045787458889999999982799980006889996995999997
Q 005519 523 ATENFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYE 601 (692)
Q Consensus 523 ~~~~f~~~~~iG~G~fG~Vyk~~~~~-~~~VAVK~l~~~~~~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E 601 (692)
..+.|++.++||+|+||.||+|.... ++.||||++........+.+.+|+.+|..++|||||++++++.+.+..|||||
T Consensus 149 p~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmE 228 (423)
T 4fie_A 149 PRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVME 228 (423)
T ss_dssp GGGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred HHHHCEEEEEECCCCCCEEEEEEECCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCEEEEEEE
T ss_conf 26843861696248184899999999998999999862554689999999999985799898716899998999999996
Q ss_pred CCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEECCCCCEEEEEECCCEECCCCC
Q ss_conf 36789976884299987778999999999999999999885699956843778996798699956997207723108986
Q 005519 602 YMVNKSLDVFLFDPTKKHLLGWQLRVRIIDGIAQGLLYLHQYSRLRIIHRDLKASNILLDQHMNPKISDFGMARMFGGDE 681 (692)
Q Consensus 602 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~al~yLH~~~~~~ivHrDikp~NILl~~~~~~ki~DFGla~~~~~~~ 681 (692)
|+++|+|.+++.. ..+++..+..|+.|++.||.|||+++ ||||||||+||||+.++.+||+|||+|+.+..+.
T Consensus 229 y~~gG~L~~~i~~----~~l~e~~~~~~~~qil~aL~ylH~~~---IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~ 301 (423)
T 4fie_A 229 FLEGGALTDIVTH----TRMNEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV 301 (423)
T ss_dssp CCTTEEHHHHHHH----SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSTTTEEECTTCCEEECCCTTCEECCSSC
T ss_pred CCCCCCHHHHHHC----CCCCHHHHHHHHHHHHHHHHHHHHCC---EECCCCCHHHEEECCCCCEEEECCCCCEECCCCC
T ss_conf 9899828988761----69899999999999999999999889---0446578777898589998980372654777887
Q ss_pred CCCCCCCEECC
Q ss_conf 55686612159
Q 005519 682 LQGNTKRIVGT 692 (692)
Q Consensus 682 ~~~~~~~~~Gt 692 (692)
... +.++||
T Consensus 302 ~~~--~~~~GT 310 (423)
T 4fie_A 302 PRR--KSLVGT 310 (423)
T ss_dssp CCB--CCCEEC
T ss_pred CCC--CCCCCC
T ss_conf 643--466647
No 7
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=1.00 E-value=1 Score=256.52 Aligned_cols=160 Identities=26% Similarity=0.382 Sum_probs=141.7
Q ss_pred CCCCCEEEEECCCCCEEEEEEEEC-CCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEECCEEEEEEEC
Q ss_conf 189536556421382749999955-9949999990457874588899999999827999800068899969959999973
Q 005519 524 TENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEY 602 (692)
Q Consensus 524 ~~~f~~~~~iG~G~fG~Vyk~~~~-~~~~VAVK~l~~~~~~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey 602 (692)
.+.|++.++||+|+||+||++... +++.||||++........+.+.+|+.++..++|||||++++++.+.+..+|||||
T Consensus 73 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy 152 (346)
T 4fih_A 73 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEF 152 (346)
T ss_dssp GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred HHHCEEEEEEECCCCEEEEEEEECCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCEEEEEEEC
T ss_conf 57538707960272829999999899989999998527656899999999999867998999199999989999999969
Q ss_pred CCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEECCCCCEEEEEECCCEECCCCCC
Q ss_conf 67899768842999877789999999999999999998856999568437789967986999569972077231089865
Q 005519 603 MVNKSLDVFLFDPTKKHLLGWQLRVRIIDGIAQGLLYLHQYSRLRIIHRDLKASNILLDQHMNPKISDFGMARMFGGDEL 682 (692)
Q Consensus 603 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~al~yLH~~~~~~ivHrDikp~NILl~~~~~~ki~DFGla~~~~~~~~ 682 (692)
+++|+|.+++.. ..+++.....++.|++.||.|||+++ |+||||||+|||++.++.+||+|||+|+.+..+..
T Consensus 153 ~~gg~L~~~l~~----~~l~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~ 225 (346)
T 4fih_A 153 LEGGALTDIVTH----TRMNEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP 225 (346)
T ss_dssp CTTEEHHHHHHH----SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCCTTCEECCSSSC
T ss_pred CCCCCHHHHHHC----CCCCHHHHHHHHHHHHHHHHHHHHCC---CCCCCCCHHHEEECCCCCEEEECCCCCEECCCCCC
T ss_conf 899808999871----89899999999999999999999888---35562788997887999889902757536678877
Q ss_pred CCCCCCEECC
Q ss_conf 5686612159
Q 005519 683 QGNTKRIVGT 692 (692)
Q Consensus 683 ~~~~~~~~Gt 692 (692)
. ++.++||
T Consensus 226 ~--~~~~~GT 233 (346)
T 4fih_A 226 R--RKSLVGT 233 (346)
T ss_dssp C--BCCCCSC
T ss_pred C--CCCCCCC
T ss_conf 5--3465627
No 8
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=1.00 E-value=1 Score=255.94 Aligned_cols=162 Identities=24% Similarity=0.389 Sum_probs=139.4
Q ss_pred CCCCEEEEECCCCCEEEEEEEEC-CCCEEEEEECCCCC--CCCHHHHHHHHHHHHHCCCCCCCEEEEEEEECCEEEEEEE
Q ss_conf 89536556421382749999955-99499999904578--7458889999999982799980006889996995999997
Q 005519 525 ENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQS--GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYE 601 (692)
Q Consensus 525 ~~f~~~~~iG~G~fG~Vyk~~~~-~~~~VAVK~l~~~~--~~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E 601 (692)
++|++.++||+|+||+||+++.. +++.||||++.... ....+.|.+|+.++.+++|||||++++++.+.+..++|||
T Consensus 24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmE 103 (350)
T 4b9d_A 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMD 103 (350)
T ss_dssp CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCEEEEEEEECCCCEEEEEEEECCCCCEEEEEEEEHHHCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCEEEEEEE
T ss_conf 25588479702779399999988999899999986587897999999999999987799898919999998999999994
Q ss_pred CCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEECCCCCEEEEEECCCEECCCCC
Q ss_conf 36789976884299987778999999999999999999885699956843778996798699956997207723108986
Q 005519 602 YMVNKSLDVFLFDPTKKHLLGWQLRVRIIDGIAQGLLYLHQYSRLRIIHRDLKASNILLDQHMNPKISDFGMARMFGGDE 681 (692)
Q Consensus 602 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~al~yLH~~~~~~ivHrDikp~NILl~~~~~~ki~DFGla~~~~~~~ 681 (692)
|+++|+|.++|... ....+++.....|+.|++.||.|||+++ |+||||||+||||++++.+||+|||+|+.+....
T Consensus 104 y~~gg~L~~~i~~~-~~~~~~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~ 179 (350)
T 4b9d_A 104 YCEGGDLFKRINAQ-KGVLFQEDQILDWFVQICLALKHVHDRK---ILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTV 179 (350)
T ss_dssp CCTTCBHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHHHHHHTT---CEETTCCGGGEEECTTCCEEECSTTEESCCCHHH
T ss_pred CCCCCCHHHHHHHC-CCCCCCHHHHHHHHHHHHHHHHHHHHCC---EEECCCCHHHEEECCCCCEEECCCCCCEEECCCC
T ss_conf 88998399999973-8999978999999999999999999899---1513597899798789998976465214406885
Q ss_pred CCCCCCCEECC
Q ss_conf 55686612159
Q 005519 682 LQGNTKRIVGT 692 (692)
Q Consensus 682 ~~~~~~~~~Gt 692 (692)
.. ++..+||
T Consensus 180 ~~--~~~~~GT 188 (350)
T 4b9d_A 180 EL--ARACIGT 188 (350)
T ss_dssp HH--HHHHHSC
T ss_pred CC--CCCCCCC
T ss_conf 41--0145788
No 9
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=1.00 E-value=1 Score=254.50 Aligned_cols=162 Identities=30% Similarity=0.417 Sum_probs=143.9
Q ss_pred CCCCEEEEECCCCCEEEEEEEEC-CCCEEEEEECCCC---CCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEECCEEEEEE
Q ss_conf 89536556421382749999955-9949999990457---8745888999999998279998000688999699599999
Q 005519 525 ENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQ---SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIY 600 (692)
Q Consensus 525 ~~f~~~~~iG~G~fG~Vyk~~~~-~~~~VAVK~l~~~---~~~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~ 600 (692)
++|++.++||+|+||+||+++.. +++.||||.+.+. .....+.+.+|+.++..++|||||++++++.+.+..++||
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm 111 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 111 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred CCCEEEEEEECCCCEEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCEEEEEE
T ss_conf 23689889831648499999999999899999988888779789999999999998679989891999997389899999
Q ss_pred ECCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEECCCCCEEEEEECCCEECCCC
Q ss_conf 73678997688429998777899999999999999999988569995684377899679869995699720772310898
Q 005519 601 EYMVNKSLDVFLFDPTKKHLLGWQLRVRIIDGIAQGLLYLHQYSRLRIIHRDLKASNILLDQHMNPKISDFGMARMFGGD 680 (692)
Q Consensus 601 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~al~yLH~~~~~~ivHrDikp~NILl~~~~~~ki~DFGla~~~~~~ 680 (692)
||+++|+|.++|. +...+++.....++.|++.||.|||+++ |+||||||+|||+++++.+||+|||+|+.+..+
T Consensus 112 Ey~~gG~L~~~i~---~~~~l~e~~~~~~~~qi~~al~ylH~~~---IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~ 185 (311)
T 4aw0_A 112 SYAKNGELLKYIR---KIGSFDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPE 185 (311)
T ss_dssp CCCTTEEHHHHHH---HHSSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred ECCCCCCHHHHHH---HCCCCCHHHHHHHHHHHHHHHHHHHHCC---CCCCCCCHHHEEECCCCCEEEEECCCCEECCCC
T ss_conf 6489989999998---7499999999999999999999999887---826878789969858988899876875025778
Q ss_pred CCCCCCCCEECC
Q ss_conf 655686612159
Q 005519 681 ELQGNTKRIVGT 692 (692)
Q Consensus 681 ~~~~~~~~~~Gt 692 (692)
.....+..++||
T Consensus 186 ~~~~~~~~~~GT 197 (311)
T 4aw0_A 186 SKQARANSFVGT 197 (311)
T ss_dssp TTCCCBCCCCSC
T ss_pred CCCCCCCCCCCC
T ss_conf 776543675568
No 10
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=1.00 E-value=1 Score=253.45 Aligned_cols=164 Identities=28% Similarity=0.464 Sum_probs=138.2
Q ss_pred HHHCCCCCEEEEECCCCCEEEEEEEECCCCEEEEEECCCC--CCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEECCEEEE
Q ss_conf 6541895365564213827499999559949999990457--87458889999999982799980006889996995999
Q 005519 521 TAATENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQ--SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKIL 598 (692)
Q Consensus 521 ~~~~~~f~~~~~iG~G~fG~Vyk~~~~~~~~VAVK~l~~~--~~~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~l 598 (692)
+...+++.+.++||+|+||+||+|++.+ .||||.++.. .....++|.+|+.++.+++|||||+++|+|.+ +..+|
T Consensus 32 ei~~~~l~l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~i 108 (307)
T 3omv_A 32 EIEASEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAI 108 (307)
T ss_dssp BCCTTSCCEEEECCCCSSSEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEE
T ss_pred EECHHHEEEEEEEEECCCCEEEEEEECC--CEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEC-CEEEE
T ss_conf 8747994984498208886899999899--68999997268999999999999999985899887469999978-95899
Q ss_pred EEECCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEECCCCCEEEEEECCCEECC
Q ss_conf 99736789976884299987778999999999999999999885699956843778996798699956997207723108
Q 005519 599 IYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIIDGIAQGLLYLHQYSRLRIIHRDLKASNILLDQHMNPKISDFGMARMFG 678 (692)
Q Consensus 599 V~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~al~yLH~~~~~~ivHrDikp~NILl~~~~~~ki~DFGla~~~~ 678 (692)
||||+++|+|.++|+.. ...+++..++.|+.|+|.||.|||+++ ||||||||+||||++++.+||+|||+|+.+.
T Consensus 109 VmEy~~gGsL~~~l~~~--~~~l~~~~~~~i~~qia~gL~yLH~~~---IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~ 183 (307)
T 3omv_A 109 VTQWCEGSSLYKHLHVQ--ETKFQMFQLIDIARQTAQGMDYLHAKN---IIHRDMKSNNIFLHEGLTVKIGDFGLATVKS 183 (307)
T ss_dssp EEECCSSCBHHHHHHTS--CCCCCHHHHHHHHHHHHHHHHHHHHTT---CBCSCCCSSSEEEETTEEEEECCCSSCBC--
T ss_pred EEECCCCCCHHHHHHHC--CCCCCHHHHHHHHHHHHHHHHHHHHCC---CCCCCCCHHHEEECCCCCEEEEECCCCEECC
T ss_conf 99748998788987524--899999999999999999999997799---5278557899788899908994415754246
Q ss_pred CCCCCCCCCCEECC
Q ss_conf 98655686612159
Q 005519 679 GDELQGNTKRIVGT 692 (692)
Q Consensus 679 ~~~~~~~~~~~~Gt 692 (692)
.......+...+||
T Consensus 184 ~~~~~~~~~~~~GT 197 (307)
T 3omv_A 184 RWSGSQQVEQPTGS 197 (307)
T ss_dssp ----------CCCC
T ss_pred CCCCCEEECCCCCC
T ss_conf 67764031564468
Done!