Query 005523
Match_columns 692
No_of_seqs 403 out of 2434
Neff 7.5
Searched_HMMs 46136
Date Fri Mar 29 00:49:03 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005523.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/005523hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2413 Xaa-Pro aminopeptidase 100.0 4E-113 9E-118 921.6 41.5 573 83-691 10-586 (606)
2 PRK09795 aminopeptidase; Provi 100.0 1.1E-61 2.4E-66 527.5 38.4 344 254-661 2-355 (361)
3 TIGR02993 ectoine_eutD ectoine 100.0 9E-60 1.9E-64 516.8 35.6 358 245-661 4-387 (391)
4 COG0006 PepP Xaa-Pro aminopept 100.0 1.5E-59 3.2E-64 515.1 37.0 364 245-662 3-381 (384)
5 PRK14575 putative peptidase; P 100.0 5.8E-57 1.3E-61 496.2 36.2 355 255-660 12-401 (406)
6 PRK14576 putative endopeptidas 100.0 1.2E-55 2.7E-60 485.5 36.7 354 255-660 12-400 (405)
7 PRK10879 proline aminopeptidas 100.0 3.9E-50 8.5E-55 445.2 36.5 362 248-666 2-430 (438)
8 PRK15173 peptidase; Provisiona 100.0 9.1E-50 2E-54 426.1 30.4 277 333-660 36-318 (323)
9 PRK13607 proline dipeptidase; 100.0 1.8E-44 4E-49 398.9 30.0 233 398-656 147-438 (443)
10 PRK12897 methionine aminopepti 100.0 1.7E-44 3.7E-49 372.7 26.4 221 411-656 3-247 (248)
11 PRK07281 methionine aminopepti 100.0 3.5E-44 7.5E-49 374.8 26.8 227 410-661 2-284 (286)
12 PRK12318 methionine aminopepti 100.0 1.5E-43 3.3E-48 372.1 27.9 229 406-659 36-291 (291)
13 TIGR00500 met_pdase_I methioni 100.0 1.3E-42 2.8E-47 358.8 27.0 221 411-656 2-246 (247)
14 PRK05716 methionine aminopepti 100.0 1.8E-42 3.9E-47 358.6 27.4 227 409-660 2-252 (252)
15 cd01085 APP X-Prolyl Aminopept 100.0 6.8E-42 1.5E-46 347.0 25.7 216 421-640 2-220 (224)
16 PRK12896 methionine aminopepti 100.0 1.5E-41 3.2E-46 352.5 26.9 224 408-656 6-254 (255)
17 cd01090 Creatinase Creatine am 100.0 1.4E-41 2.9E-46 346.2 25.6 214 418-656 1-228 (228)
18 PLN03158 methionine aminopepti 100.0 2.3E-41 4.9E-46 366.4 28.0 236 405-664 130-389 (396)
19 cd01087 Prolidase Prolidase. E 100.0 3.5E-41 7.7E-46 347.1 24.7 212 418-656 1-243 (243)
20 KOG2414 Putative Xaa-Pro amino 100.0 7.5E-41 1.6E-45 345.1 25.8 375 232-666 43-482 (488)
21 KOG2737 Putative metallopeptid 100.0 2.6E-39 5.6E-44 330.1 22.6 241 404-668 177-478 (492)
22 cd01086 MetAP1 Methionine Amin 100.0 7E-39 1.5E-43 329.0 25.7 214 418-656 1-238 (238)
23 cd01092 APP-like Similar to Pr 100.0 1.1E-38 2.3E-43 320.5 25.1 204 418-637 1-206 (208)
24 cd01091 CDC68-like Related to 100.0 1.1E-38 2.3E-43 327.1 23.8 215 418-656 1-243 (243)
25 PF00557 Peptidase_M24: Metall 100.0 3.1E-37 6.7E-42 309.9 22.5 203 419-636 1-207 (207)
26 cd01066 APP_MetAP A family inc 100.0 7.1E-35 1.5E-39 290.9 24.6 203 418-637 1-205 (207)
27 cd01089 PA2G4-like Related to 100.0 7.2E-35 1.6E-39 297.2 22.9 208 418-656 1-228 (228)
28 COG0024 Map Methionine aminope 100.0 1.9E-32 4.2E-37 276.8 26.2 222 412-658 5-253 (255)
29 KOG2738 Putative methionine am 100.0 1.1E-30 2.4E-35 259.8 21.5 224 410-657 114-360 (369)
30 PTZ00053 methionine aminopepti 100.0 5.1E-30 1.1E-34 279.9 27.2 196 410-619 150-360 (470)
31 TIGR00495 crvDNA_42K 42K curve 100.0 9.4E-30 2E-34 276.6 28.4 199 410-619 11-232 (389)
32 PRK08671 methionine aminopepti 100.0 6.6E-30 1.4E-34 269.3 26.0 188 417-619 1-189 (291)
33 TIGR00501 met_pdase_II methion 100.0 4.6E-29 1E-33 263.1 23.0 200 415-630 2-202 (295)
34 cd01088 MetAP2 Methionine Amin 100.0 3.6E-28 7.8E-33 256.2 22.3 195 418-628 1-196 (291)
35 KOG1189 Global transcriptional 99.9 4.1E-25 8.8E-30 242.1 26.6 345 279-678 20-399 (960)
36 COG5406 Nucleosome binding fac 99.8 1.9E-18 4.1E-23 186.3 19.3 247 398-666 156-427 (1001)
37 PRK09795 aminopeptidase; Provi 99.7 5.6E-15 1.2E-19 161.1 27.5 122 83-228 2-125 (361)
38 PF01321 Creatinase_N: Creatin 99.6 3.6E-15 7.7E-20 138.2 8.3 123 84-228 1-130 (132)
39 PF01321 Creatinase_N: Creatin 99.5 2.9E-14 6.3E-19 132.0 8.1 128 255-412 1-132 (132)
40 TIGR02993 ectoine_eutD ectoine 99.4 1.8E-11 3.8E-16 135.0 18.2 131 79-228 9-156 (391)
41 KOG2775 Metallopeptidase [Gene 99.3 2.2E-11 4.8E-16 122.5 15.9 186 418-616 85-284 (397)
42 KOG2776 Metallopeptidase [Gene 99.3 2.8E-10 6E-15 117.7 21.0 155 410-573 13-182 (398)
43 PRK14575 putative peptidase; P 99.1 1.6E-08 3.5E-13 112.1 25.0 128 83-228 11-176 (406)
44 PRK14576 putative endopeptidas 98.9 2.2E-08 4.7E-13 111.0 16.9 127 84-228 12-175 (405)
45 COG0006 PepP Xaa-Pro aminopept 98.9 3.2E-07 6.8E-12 101.2 22.7 131 80-229 9-153 (384)
46 KOG2413 Xaa-Pro aminopeptidase 98.0 1.3E-05 2.9E-10 89.0 8.2 106 255-370 11-132 (606)
47 PLN03158 methionine aminopepti 96.9 0.0057 1.2E-07 67.4 11.0 114 515-636 127-247 (396)
48 cd01086 MetAP1 Methionine Amin 96.6 0.018 3.9E-07 59.0 11.3 99 530-636 2-105 (238)
49 cd01088 MetAP2 Methionine Amin 96.4 0.029 6.2E-07 59.6 11.5 96 530-634 2-98 (291)
50 COG0024 Map Methionine aminope 95.9 0.045 9.7E-07 56.4 9.5 101 530-636 12-116 (255)
51 PRK05716 methionine aminopepti 95.8 0.079 1.7E-06 54.7 11.3 97 530-635 12-114 (252)
52 PRK12896 methionine aminopepti 95.4 0.11 2.3E-06 53.9 10.6 108 519-635 4-119 (255)
53 PF05195 AMP_N: Aminopeptidase 95.3 0.12 2.7E-06 48.2 9.7 98 248-355 2-127 (134)
54 KOG2738 Putative methionine am 94.5 0.16 3.4E-06 52.6 8.3 97 530-637 123-227 (369)
55 PRK08671 methionine aminopepti 93.0 1.1 2.5E-05 47.4 12.3 96 530-635 3-100 (291)
56 TIGR00501 met_pdase_II methion 93.0 1.1 2.3E-05 47.7 11.9 95 531-635 7-103 (295)
57 TIGR00495 crvDNA_42K 42K curve 92.9 1 2.2E-05 49.8 11.9 103 531-636 21-130 (389)
58 cd01087 Prolidase Prolidase. E 91.3 1.9 4.1E-05 44.2 11.2 94 531-634 3-97 (243)
59 cd01092 APP-like Similar to Pr 91.0 2 4.3E-05 42.6 10.7 97 531-636 3-100 (208)
60 PF00557 Peptidase_M24: Metall 90.7 1.9 4.2E-05 42.8 10.3 94 531-634 2-98 (207)
61 PRK12897 methionine aminopepti 90.3 3 6.4E-05 43.1 11.5 96 532-635 13-113 (248)
62 PTZ00053 methionine aminopepti 90.1 3 6.6E-05 47.0 12.0 93 532-634 161-261 (470)
63 TIGR00500 met_pdase_I methioni 89.0 4.2 9E-05 41.8 11.5 95 532-635 12-112 (247)
64 cd01089 PA2G4-like Related to 88.2 5.9 0.00013 40.3 11.8 100 531-636 3-112 (228)
65 PRK07281 methionine aminopepti 88.1 3.9 8.5E-05 43.3 10.7 80 532-618 13-101 (286)
66 cd01090 Creatinase Creatine am 88.1 4.9 0.00011 41.0 11.1 96 531-635 3-105 (228)
67 PRK12318 methionine aminopepti 88.0 5.2 0.00011 42.4 11.6 97 531-635 51-154 (291)
68 cd01066 APP_MetAP A family inc 87.6 4.2 9.1E-05 39.7 10.1 97 531-636 3-99 (207)
69 PF14826 FACT-Spt16_Nlob: FACT 85.8 2.3 5E-05 41.1 6.8 136 82-218 7-159 (163)
70 cd01085 APP X-Prolyl Aminopept 80.6 12 0.00025 38.1 9.9 100 531-635 5-107 (224)
71 PF05195 AMP_N: Aminopeptidase 80.6 1.4 3E-05 41.1 2.9 64 82-149 7-77 (134)
72 KOG2775 Metallopeptidase [Gene 80.2 8.9 0.00019 40.1 8.6 85 531-622 87-177 (397)
73 cd01091 CDC68-like Related to 79.1 16 0.00034 37.7 10.4 99 421-527 121-234 (243)
74 PRK10879 proline aminopeptidas 79.1 17 0.00037 40.9 11.6 92 532-634 182-276 (438)
75 PRK15173 peptidase; Provisiona 70.7 39 0.00085 36.3 11.2 93 533-635 105-198 (323)
76 PF14826 FACT-Spt16_Nlob: FACT 68.7 14 0.00029 35.8 6.4 57 249-313 3-77 (163)
77 KOG2776 Metallopeptidase [Gene 65.0 41 0.00089 36.3 9.4 100 532-638 24-134 (398)
78 KOG2414 Putative Xaa-Pro amino 43.2 49 0.0011 36.4 5.9 67 79-149 65-140 (488)
79 PF00486 Trans_reg_C: Transcri 38.5 43 0.00094 27.1 3.8 58 196-269 6-63 (77)
80 PF07385 DUF1498: Protein of u 38.4 22 0.00047 35.9 2.2 52 600-658 152-206 (225)
81 PF14503 YhfZ_C: YhfZ C-termin 36.2 1.1E+02 0.0025 31.2 7.0 33 184-218 112-144 (232)
82 COG2861 Uncharacterized protei 35.7 1E+02 0.0023 31.6 6.5 130 68-223 92-243 (250)
83 COG3822 ABC-type sugar transpo 35.3 36 0.00079 33.4 3.1 43 601-643 152-197 (225)
84 PRK13607 proline dipeptidase; 34.3 2.3E+02 0.005 32.0 9.9 95 531-633 169-263 (443)
85 TIGR03241 arg_catab_astB succi 32.6 1.4E+02 0.003 32.9 7.2 51 404-456 366-416 (443)
86 PRK00865 glutamate racemase; P 28.1 1.1E+02 0.0024 31.8 5.6 70 187-276 6-76 (261)
87 cd00383 trans_reg_C Effector d 27.1 96 0.0021 26.1 4.2 58 196-269 24-81 (95)
88 smart00862 Trans_reg_C Transcr 25.9 1.3E+02 0.0028 24.2 4.6 58 196-268 6-63 (78)
89 TIGR00035 asp_race aspartate r 25.8 5.3E+02 0.012 26.0 10.1 137 79-275 58-195 (229)
90 PF14980 TIP39: TIP39 peptide 23.9 72 0.0016 23.9 2.3 18 668-685 29-47 (51)
91 PF02900 LigB: Catalytic LigB 21.8 3.9E+02 0.0084 27.7 8.4 52 81-149 26-79 (272)
No 1
>KOG2413 consensus Xaa-Pro aminopeptidase [Amino acid transport and metabolism]
Probab=100.00 E-value=4.3e-113 Score=921.57 Aligned_cols=573 Identities=55% Similarity=0.923 Sum_probs=536.8
Q ss_pred HHHHHHHHHhcCCCCCccEEEEcCCCCCcccccccccccceEecCccCCCeEEEEeCCceEEEcCcccHHHHHhhcCCcE
Q 005523 83 EKLRALRELFSRPGVNIDAYIIPSQDAHQSEFIAECYMRRAYISGFTGSAGTAVVTKDKAALWTDGRYFLQAEKQLSSSW 162 (692)
Q Consensus 83 ~Rl~~lr~~m~~~~~~lDa~lI~~~d~h~se~~~~~~~~i~YlTGFtgs~g~~vit~~~~~L~td~ry~~qa~~~~~~~~ 162 (692)
-++.++|+.|+. .+++|||||+.|+|||||+++++++++|||||+||+|++|||..+|+||||+||+.||.+|++++|
T Consensus 10 ~~~~~~~~~~~~--~~i~aYi~Ps~DaH~sEy~~~~D~R~~flsGFsGsag~Avit~~~a~lwtD~RY~~QA~~qld~~W 87 (606)
T KOG2413|consen 10 FELMRLRELMKS--PPIDAYILPSTDAHQSEYIADRDERRAFLSGFSGSAGTAVITEEEAALWTDGRYFQQAEQQLDSNW 87 (606)
T ss_pred HHHHHHHHHhcC--CCceEEEccCCchhhhhhhcchhhhhhhhcccCCCcceEEEecCcceEEEccHHHHHHHhhhcccc
Confidence 478999999999 999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEcCCCCCCCHHHHHHhhcCCCCeEEEcCCCCcHHHHHHHHHHHhhCCcEEEEccCcchHHHhhhhCCCCCCCCcccc
Q 005523 163 ILMRSGNHGVPTTFEWLNDVLAPGGRVGIDPFLFSSDAAEELKEAIAKKNHELVYLYDLNLVDVIWKESRPKPPNKPIRV 242 (692)
Q Consensus 163 ~~~~~~~~~~~~~~~~l~~~~~~~~~ig~e~~~~s~~~~~~L~~~l~~~~~~l~~~~~~~lvd~~w~~~rp~~~~~~~~~ 242 (692)
++++.+.+ ++++.+||.+.++.+.+||||+.++|++.|+++.+.|..++++++++ ..||||.+|+ +||++|.++++.
T Consensus 88 ~l~k~~~~-~~~v~~wl~~~l~~~~~vG~Dp~Lis~~~~~~~~~~l~s~~~~Lv~i-~~nLVD~iW~-~rP~~~~~~v~~ 164 (606)
T KOG2413|consen 88 TLMKMGED-VPTVEEWLAKVLPEGSRVGIDPTLISFDAWKQLEKSLTSKGLELVPI-PGNLVDEIWG-DRPERPGNPVIV 164 (606)
T ss_pred eeeeccCC-CccHHHHHHHhCCCccccccCcceechhHHHhHHHHHhhCCCeEeec-cccchhhhhc-cCCccCCCceEE
Confidence 99998866 89999999999999999999999999999999999999999999999 7999999997 999999999999
Q ss_pred ccccccchhHHHHHHHHHHHHHHcCCCEEEEcccchhhhhcCCCCCCCCCCcceeeEEEEeCCceEEEEeCCCCCHHHHh
Q 005523 243 HALKYAGLDVASKLSSLRSDLVDAGSSAIVISMLDEIAWLLNLRGSDVPHSPVMYAYLIVEMDRAKLFVDDSKVTPDVMD 322 (692)
Q Consensus 243 ~~~~fs~~e~~~Rl~rlr~~m~e~glDallis~~~ni~YLtGf~g~~~~~~Pv~~a~llvt~~~~~L~vd~~~~~~~~~~ 322 (692)
++..|+|.....|+..||+.|++.+.+++|++..++|+||.|+||+|+||+||+++|++|+.++..||+|+.+...+...
T Consensus 165 l~~~~~G~~~~~Kv~~LR~~l~~~~~~a~Vvs~LdeIaWllNLRGsDipynPv~~sY~~it~dei~lfvd~~k~~~~~~~ 244 (606)
T KOG2413|consen 165 LDLEFAGLSVDDKVDNLRKKLKEKKCDAFVVTALDEIAWLLNLRGSDIPYNPVFYSYAIITMDEIFLFVDNSKLSDESKK 244 (606)
T ss_pred eeccccCcchhHHHHHHHHHHhhcCCcEEehhhHHHHHHHHhcccCcCCCCchhhhhhhhhhhhhheeecCcccCchhHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999988888
Q ss_pred hhhcCCeEEEecccHHHHHHHHHhc--CCeEEEeCCCCcHHHHHHHHHHHHHhhhhccccccccccccCCCCCCCCCcce
Q 005523 323 HLKNAGVELRPYNSILSEIKSLAAQ--GAQLWLDPSSVNAAIMNTYEIAIEKYLTSNNNKKSKTKMHTDTTGQSGGPAGV 400 (692)
Q Consensus 323 ~l~~~~v~i~~y~~~~~~l~~l~~~--~~~Igvd~~~~s~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 400 (692)
++...+|.+++|.++...++.++.. ..+|++.. ..++.+...+ +.-..+
T Consensus 245 ~~~~~~v~i~pY~~i~~~i~~~~~~~~~~~i~ia~-~~~~~i~~~i----------------------------~~~~~~ 295 (606)
T KOG2413|consen 245 HLREDGVEIRPYDQIWSDIKNWASAFADKKIWISP-ETNYGIGELI----------------------------GEDHSM 295 (606)
T ss_pred HHhhCceeeeeHHHHHHHHHHHhcccCceeEeecc-cceeeecccc----------------------------cccccc
Confidence 8888889999999999999888753 34555554 3333322221 222235
Q ss_pred ecCCccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHhCCCCCCCCceeeee-
Q 005523 401 FRTSPIAFSKAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGFLDTSFDTISGS- 479 (692)
Q Consensus 401 d~~~~i~~lR~vKs~~EIe~mR~A~~i~~~a~~~~~~~l~~~i~~~~G~TE~eia~~l~~~~~~~~G~~~~~f~~iv~s- 479 (692)
...++|..++++|++.|+++||.|+..++.|+.++++|+++.+.+...+||.+++.++++++.++.++.+.||+||+++
T Consensus 296 ~~~Spi~~~kAiKN~~E~~gmr~shirD~~Alve~~~wle~~~~~g~~itE~~~A~kle~fR~~~~~fmglSFeTIS~s~ 375 (606)
T KOG2413|consen 296 IDPSPISRAKAIKNDDELKGMRNSHIRDGAALVEYFAWLEKELHKGYTITEYDAADKLEEFRSRQDHFMGLSFETISSSV 375 (606)
T ss_pred cccCHHHHHHHhcChHHhhhhhhcchhhHHHHHHHHHHHhhhhhcCcccchhhHHHHHHHHHHhhccccCcCcceeeccC
Confidence 5678899999999999999999999999999999999999999443349999999999999999999999999999977
Q ss_pred CCCCccccccCCCCCCcccCCCCeEEEecceeECCeEeeeEeEEEcCCCCHHHHHHHHHHHHHHHHHHHccCCCCCChHH
Q 005523 480 GANGAIIHYKPEPGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFPQSTPGFV 559 (692)
Q Consensus 480 G~~~a~~h~~p~~~~~~~l~~Gdiv~iD~g~~~~Gy~aD~tRT~~vG~p~~~~~~~~~~v~~a~~~~~~~~~P~G~~~~d 559 (692)
|+|+|++||.|...+++++.+..++++|+|+||..+++|+|||+++|+|++++++.|+.|++++.++..+++|+|+.+..
T Consensus 376 G~NgAviHYsP~~e~n~~i~~~kiyL~DSGaQY~DGTTDvTRT~HfgePs~eek~~yT~VLkGhi~la~~vFP~~t~g~~ 455 (606)
T KOG2413|consen 376 GPNGAVIHYSPPAETNRIVSPDKIYLCDSGAQYLDGTTDVTRTVHFGEPTAEEKEAYTLVLKGHIALARAVFPKGTKGSV 455 (606)
T ss_pred CCCceeeecCCCccccceecCceEEEEccCcccccCccceeEEEecCCCCHHHHHHHHHHHHhhhHhhhcccCCCCCcch
Confidence 99999999999998999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCCcCCcccccccCCccccCCCcccccC-CCCccccCCCEEEEcceeeecCcceEEEEEEEEEecCC
Q 005523 560 LDAFARSSLWKIGLDYRHGTGHGVGAALNVHEGPQSISFRY-GNMTPLVEGMIVSNEPGYYEDHAFGIRIENLLYVKEVG 638 (692)
Q Consensus 560 v~~~a~~~l~~~G~~~~h~~GHgIG~~l~~hE~P~~i~~~~-~~~~~L~~GMV~siEPgiy~~g~~GiriEd~vlVte~~ 638 (692)
++.++|..+|+.|++|.|++|||||+||++||+|..++.++ .+...|++||++++|||+|.+|.||+|+||.++|.+.+
T Consensus 456 lD~laR~~LW~~gLDy~HgTGHGVG~fLnVhE~P~~is~r~~~~~~~l~ag~~~s~EPGYY~dg~fGIRienv~~vvd~~ 535 (606)
T KOG2413|consen 456 LDALARSALWKAGLDYGHGTGHGVGSFLNVHEGPIGIGYRPYSSNFPLQAGMVFSIEPGYYKDGEFGIRIENVVEVVDAG 535 (606)
T ss_pred hHHHHHHHHHhhccccCCCCCcccccceEeccCCceeeeeecCCCchhcCceEeccCCcccccCcceEEEeeEEEEEecc
Confidence 99999999999999999999999999999999999888874 37788999999999999999999999999999999999
Q ss_pred CCCCCCCccccCeeEccCCCCcccchhhccCCHHHHHHHHHHHHHHHHHhcCC
Q 005523 639 TPNRFGGVSYLGFEKLTFVPIQTKLVDLSLLSAAEIDWLNNYHSQVWEKVSKS 691 (692)
Q Consensus 639 ~~~~~~~~~~~G~E~LT~~P~~~~li~~~l~~~~e~~~~n~y~~~~~~~~~~~ 691 (692)
++++| ..||+||.||.+|+++++|+.+||+++|++|||+||++||++++|+
T Consensus 536 ~~~~~--~~~L~fe~lT~vP~q~klid~~LLs~eE~~~LN~Yh~~v~~~i~~~ 586 (606)
T KOG2413|consen 536 TKHNF--RGFLTFEPLTLVPYQTKLIDKSLLSEEEINWLNEYHAKVRSKIGPE 586 (606)
T ss_pred ccccc--cceeeeccceecceecccCChhhCCHHHHHHHHHHHHHHHHhccHH
Confidence 99988 7899999999999999999999999999999999999999999885
No 2
>PRK09795 aminopeptidase; Provisional
Probab=100.00 E-value=1.1e-61 Score=527.50 Aligned_cols=344 Identities=26% Similarity=0.345 Sum_probs=296.4
Q ss_pred HHHHHHHHHHHHcCCCEEEEcccchhhhhcCCCCCCCCCCcceeeEEEEeCCceEEEEeCCCCCHHHHhhhhcCCeEEEe
Q 005523 254 SKLSSLRSDLVDAGSSAIVISMLDEIAWLLNLRGSDVPHSPVMYAYLIVEMDRAKLFVDDSKVTPDVMDHLKNAGVELRP 333 (692)
Q Consensus 254 ~Rl~rlr~~m~e~glDallis~~~ni~YLtGf~g~~~~~~Pv~~a~llvt~~~~~L~vd~~~~~~~~~~~l~~~~v~i~~ 333 (692)
+|+++|++.|+++++|++||++++|++|||||+|+. ++++|+.++.+||+| .+|.++++.......+.+..
T Consensus 2 ~Rl~~l~~~m~~~~lDa~lI~~~~n~~YLTGf~g~~--------g~llIt~~~~~l~td-~ry~~qa~~~~~~~~v~~~~ 72 (361)
T PRK09795 2 TLLASLRDWLKAQQLDAVLLSSRQNKQPHLGISTGS--------GYVVISRESAHILVD-SRYYADVEARAQGYQLHLLD 72 (361)
T ss_pred cHHHHHHHHHHHCCCCEEEECCccccccccCccCCC--------eEEEEECCCCEEEcC-cchHHHHHhhCCCceEEEec
Confidence 589999999999999999999999999999999865 688899988999999 47777776665533333322
Q ss_pred cc-cHHHHHHHHHh--cCCeEEEeCCCCcHHHHHHHHHHHHHhhhhccccccccccccCCCCCCCCCcceecCCcccccc
Q 005523 334 YN-SILSEIKSLAA--QGAQLWLDPSSVNAAIMNTYEIAIEKYLTSNNNKKSKTKMHTDTTGQSGGPAGVFRTSPIAFSK 410 (692)
Q Consensus 334 y~-~~~~~l~~l~~--~~~~Igvd~~~~s~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~i~~lR 410 (692)
.. .+.+.+.++.. +.++||+|.+.+++..++.|+..+ +.++++. .+..+|
T Consensus 73 ~~~~~~~~L~~~L~~~~~~~Ig~e~~~~s~~~~~~L~~~l-------------------------~~~~~~~--~~~~lR 125 (361)
T PRK09795 73 ATNTLTTIVNQIIADEQLQTLGFEGQQVSWETAHRWQSEL-------------------------NAKLVSA--TPDVLR 125 (361)
T ss_pred CCccHHHHHHHHHHhcCCcEEEEecCcccHHHHHHHHHhc-------------------------Ccccccc--cHHHHh
Confidence 22 23445555543 246899999999999998887642 1233444 378999
Q ss_pred ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHhCCCCCCCCceeeeeCCCCccccccC
Q 005523 411 AVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGFLDTSFDTISGSGANGAIIHYKP 490 (692)
Q Consensus 411 ~vKs~~EIe~mR~A~~i~~~a~~~~~~~l~~~i~~~~G~TE~eia~~l~~~~~~~~G~~~~~f~~iv~sG~~~a~~h~~p 490 (692)
+|||++||+.||+|+++++.++..+.+.+ +||+||.|+++.++... ...|+...+|+++|++|+|++.||+.|
T Consensus 126 ~iKs~~Ei~~~r~a~~i~~~~~~~~~~~i------~~G~tE~e~~~~~~~~~-~~~G~~~~~f~~iv~sG~~~~~ph~~~ 198 (361)
T PRK09795 126 QIKTPEEVEKIRLACGIADRGAEHIRRFI------QAGMSEREIAAELEWFM-RQQGAEKASFDTIVASGWRGALPHGKA 198 (361)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHhc------cCCCcHHHHHHHHHHHH-HHCCCCcCCCCeEEEEeccccccCCCC
Confidence 99999999999999999999998887766 99999999999998764 457888889999999999999999999
Q ss_pred CCCCCcccCCCCeEEEecceeECCeEeeeEeEEEcCC--CCH---HHHHHHHHHHHHHHHHHHccCCCCCChHHHHHHHH
Q 005523 491 EPGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGE--PTA---REKECFTRVLQGHIALDQAIFPQSTPGFVLDAFAR 565 (692)
Q Consensus 491 ~~~~~~~l~~Gdiv~iD~g~~~~Gy~aD~tRT~~vG~--p~~---~~~~~~~~v~~a~~~~~~~~~P~G~~~~dv~~~a~ 565 (692)
++ ++|++||+|++|+|+.|+||++|+||||++|. +++ +++++|+++++++.++++++|| |++++||+++++
T Consensus 199 ~~---~~l~~gd~v~~d~g~~~~gY~sd~tRt~~~g~~~~~~~~~~~~~~~~~v~~a~~~~~~~~rp-G~~~~~v~~~~~ 274 (361)
T PRK09795 199 SD---KIVAAGEFVTLDFGALYQGYCSDMTRTLLVNGEGVSAESHPLFNVYQIVLQAQLAAISAIRP-GVRCQQVDDAAR 274 (361)
T ss_pred CC---ceecCCCEEEEEeccccCCEeecceEEEEeCCcCCchhHHHHHHHHHHHHHHHHHHHHHcCC-CCcHHHHHHHHH
Confidence 77 89999999999999999999999999999963 233 3789999999999999999999 999999999999
Q ss_pred HHHHHcCC--CCcCCcccccccCCccccCCCcccccCCCCccccCCCEEEEcceeeecCcceEEEEEEEEEecCCCCCCC
Q 005523 566 SSLWKIGL--DYRHGTGHGVGAALNVHEGPQSISFRYGNMTPLVEGMIVSNEPGYYEDHAFGIRIENLLYVKEVGTPNRF 643 (692)
Q Consensus 566 ~~l~~~G~--~~~h~~GHgIG~~l~~hE~P~~i~~~~~~~~~L~~GMV~siEPgiy~~g~~GiriEd~vlVte~~~~~~~ 643 (692)
+++++.|+ ++.|++||||| +++||.|. ++ ++++.+|++||||+||||+|.|+.+|+|+||+|+||++
T Consensus 275 ~~~~~~g~~~~~~h~~GHgiG--l~~he~p~-i~--~~~~~~l~~gmv~~iEpgiy~~~~~gvriEd~v~vt~~------ 343 (361)
T PRK09795 275 RVITEAGYGDYFGHNTGHAIG--IEVHEDPR-FS--PRDTTTLQPGMLLTVEPGIYLPGQGGVRIEDVVLVTPQ------ 343 (361)
T ss_pred HHHHHcCCCccCCCCCCccCC--ccccCCCC-cC--CCCCCCcCCCCEEEECCEEEeCCCCEEEEeeEEEECCC------
Confidence 99999999 47899999999 99999997 54 45889999999999999999999999999999999999
Q ss_pred CCccccCeeEccCCCCcc
Q 005523 644 GGVSYLGFEKLTFVPIQT 661 (692)
Q Consensus 644 ~~~~~~G~E~LT~~P~~~ 661 (692)
|+|+||.+|++.
T Consensus 344 ------G~e~Lt~~~~~l 355 (361)
T PRK09795 344 ------GAEVLYAMPKTV 355 (361)
T ss_pred ------CcEeCcCCCceE
Confidence 999999999543
No 3
>TIGR02993 ectoine_eutD ectoine utilization protein EutD. Members of this family are putative peptidases or hydrolases similar to Xaa-Pro aminopeptidase (pfam00557). They belong to ectoine utilization operons, as found in Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. The exact function is unknown.
Probab=100.00 E-value=9e-60 Score=516.75 Aligned_cols=358 Identities=16% Similarity=0.201 Sum_probs=295.5
Q ss_pred ccccchhHHHHHHHHHHHHHHcCCCEEEEcccchhhhhcCCCCCCCCCCcceeeEEEEe-CCceEEEEeCCCCCHHHHh-
Q 005523 245 LKYAGLDVASKLSSLRSDLVDAGSSAIVISMLDEIAWLLNLRGSDVPHSPVMYAYLIVE-MDRAKLFVDDSKVTPDVMD- 322 (692)
Q Consensus 245 ~~fs~~e~~~Rl~rlr~~m~e~glDallis~~~ni~YLtGf~g~~~~~~Pv~~a~llvt-~~~~~L~vd~~~~~~~~~~- 322 (692)
..|+..||++|++|+|+.|+++|+|++|++++.|++|||||.+.. ..+| .+++|+ +++++|+++..... .+..
T Consensus 4 ~~f~~~E~~~Rl~rl~~~m~~~~lDalli~~~~ni~YltG~~~~~-~~~~---~~l~v~~~~~~~l~~~~~~~~-~~~~~ 78 (391)
T TIGR02993 4 LFFTRAEYQARLDKTRAAMEARGIDLLIVTDPSNMAWLTGYDGWS-FYVH---QCVLLPPEGEPIWYGRGQDAN-GAKRT 78 (391)
T ss_pred CCCCHHHHHHHHHHHHHHHHHcCCCEEEEcCcccceeeccCCCCc-eEEE---EEEEEcCCCceEEEehhhhhh-hHhhe
Confidence 569999999999999999999999999999999999999998653 1122 456666 56778887632221 1221
Q ss_pred -hhhcCCeEEEecc-------------cHHHHHHHHHhcCCeEEEeCCC--CcHHHHHHHHHHHHHhhhhcccccccccc
Q 005523 323 -HLKNAGVELRPYN-------------SILSEIKSLAAQGAQLWLDPSS--VNAAIMNTYEIAIEKYLTSNNNKKSKTKM 386 (692)
Q Consensus 323 -~l~~~~v~i~~y~-------------~~~~~l~~l~~~~~~Igvd~~~--~s~~~~~~L~~~~~~~~~~~~~~~~~~~~ 386 (692)
++... .+..|. .+.+.+++.+...++||+|.+. +++..++.|++.+
T Consensus 79 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~ig~e~~~~~~~~~~~~~l~~~l---------------- 140 (391)
T TIGR02993 79 AFMDHD--NIVGYPDHYVQSTERHPMDYLSEILQDRGWDSLTIGVEMDNYYFSAAAFASLQKHL---------------- 140 (391)
T ss_pred eecccc--ceeecccccccCCCCCHHHHHHHHHHhcCCCCCcEEEecCCCccCHHHHHHHHHhC----------------
Confidence 11111 122221 2233333333234589999875 7899999988754
Q ss_pred ccCCCCCCCCCcceecCCccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHH--
Q 005523 387 HTDTTGQSGGPAGVFRTSPIAFSKAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSK-- 464 (692)
Q Consensus 387 ~~~~~~~~~~~~~vd~~~~i~~lR~vKs~~EIe~mR~A~~i~~~a~~~~~~~l~~~i~~~~G~TE~eia~~l~~~~~~-- 464 (692)
|+++++|+++++..+|+|||++||+.||+|++++++++.++.+.+ +||+||.|+++.+....+.
T Consensus 141 --------~~~~~~d~~~~~~~lR~iKs~~EI~~lr~A~~i~~~~~~~~~~~i------~pG~tE~ei~~~~~~~~~~~~ 206 (391)
T TIGR02993 141 --------PNARFVDATALVNWQRAVKSETEISYMRVAARIVEKMHQRIFERI------EPGMRKCDLVADIYDAGIRGV 206 (391)
T ss_pred --------CCCEEEehHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHh------cCCCCHHHHHHHHHHhhhhcc
Confidence 678899999999999999999999999999999999999887776 9999999999988643222
Q ss_pred -hCCCCCCCCceeeeeCCCCccccccCCCCCCcccCCCCeEEEecceeECCeEeeeEeEEEcCCCCHHHHHHHHHHHHHH
Q 005523 465 -QSGFLDTSFDTISGSGANGAIIHYKPEPGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGH 543 (692)
Q Consensus 465 -~~G~~~~~f~~iv~sG~~~a~~h~~p~~~~~~~l~~Gdiv~iD~g~~~~Gy~aD~tRT~~vG~p~~~~~~~~~~v~~a~ 543 (692)
..|...++|.+++++|+|++.||+.|++ ++|++||+|++|+|+.|+||++|+||||++|+|+++++++|+.+++++
T Consensus 207 ~~~g~~~~~~~~iv~sG~~~a~pH~~~~~---~~l~~gd~v~iD~g~~~~GY~sD~tRT~~vG~p~~~~~~~~~~~~~a~ 283 (391)
T TIGR02993 207 DGFGGDYPAIVPLLPSGADASAPHLTWDD---SPMKVGEGTFFEIAGCYKRYHCPLSRTVFLGKPTQAFLDAEKAVLEGM 283 (391)
T ss_pred cCcCCCcCCcccccccCccccCCCCCCCC---CcccCCCEEEEEeeeecccCccceeEEEEcCCCCHHHHHHHHHHHHHH
Confidence 1234446777899999999999999976 899999999999999999999999999999999999999999999999
Q ss_pred HHHHHccCCCCCChHHHHHHHHHHHHHcCCCCcCCcccccccCCccccC-----CCcccccCCCCccccCCCEEEEccee
Q 005523 544 IALDQAIFPQSTPGFVLDAFARSSLWKIGLDYRHGTGHGVGAALNVHEG-----PQSISFRYGNMTPLVEGMIVSNEPGY 618 (692)
Q Consensus 544 ~~~~~~~~P~G~~~~dv~~~a~~~l~~~G~~~~h~~GHgIG~~l~~hE~-----P~~i~~~~~~~~~L~~GMV~siEPgi 618 (692)
.++++++|| |++++||++++++++++.|+...|++||||| ++.|+. |. ++ ++++.+|++||||++|||+
T Consensus 284 ~~~i~~ikp-G~~~~dv~~~~~~~~~~~G~~~~h~~GhgiG--l~~~~~~~e~~~~-l~--~~~~~~L~~GMv~tvEpgi 357 (391)
T TIGR02993 284 EAGLEAAKP-GNTCEDIANAFFAVLKKYGIHKDSRTGYPIG--LSYPPDWGERTMS-LR--PGDNTVLKPGMTFHFMTGL 357 (391)
T ss_pred HHHHHHcCC-CCcHHHHHHHHHHHHHHcCCccCCCceeeec--cCcCCCCCCcccc-cc--CCCCceecCCCEEEEccee
Confidence 999999999 9999999999999999999987899999999 888742 33 43 4588999999999999999
Q ss_pred eecCcceEEEEEEEEEecCCCCCCCCCccccCeeEccCCCCcc
Q 005523 619 YEDHAFGIRIENLLYVKEVGTPNRFGGVSYLGFEKLTFVPIQT 661 (692)
Q Consensus 619 y~~g~~GiriEd~vlVte~~~~~~~~~~~~~G~E~LT~~P~~~ 661 (692)
|.++ +|+|+||+|+||++ |+|.||.+|++.
T Consensus 358 y~~~-~Gvried~v~VT~~------------G~e~Lt~~p~~l 387 (391)
T TIGR02993 358 WMED-WGLEITESILITET------------GVECLSSVPRKL 387 (391)
T ss_pred EeCC-CCeEEeeEEEECCC------------cceecccCCccc
Confidence 9987 59999999999999 999999999554
No 4
>COG0006 PepP Xaa-Pro aminopeptidase [Amino acid transport and metabolism]
Probab=100.00 E-value=1.5e-59 Score=515.06 Aligned_cols=364 Identities=30% Similarity=0.406 Sum_probs=303.5
Q ss_pred ccccchhHHHHHHHHHHHHHHcCCCEEEEcccchhhhhcCCCCCCCCCCcceeeEEEEe-CCceEEEEeCCCCCHHHHhh
Q 005523 245 LKYAGLDVASKLSSLRSDLVDAGSSAIVISMLDEIAWLLNLRGSDVPHSPVMYAYLIVE-MDRAKLFVDDSKVTPDVMDH 323 (692)
Q Consensus 245 ~~fs~~e~~~Rl~rlr~~m~e~glDallis~~~ni~YLtGf~g~~~~~~Pv~~a~llvt-~~~~~L~vd~~~~~~~~~~~ 323 (692)
..|+..++..|+++++..|.++++|+++++++.|++||||+.... +.. . ..+++. .++++||++... ...+...
T Consensus 3 ~~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~n~~yltg~~~~~--~~~-~-~~~~~~~~~~~~l~~~~~~-~~~~~~~ 77 (384)
T COG0006 3 LRFADEEYRARLARLRELMEEAGLDALLLTSPSNFYYLTGFDAFG--FER-L-QALLVPAEGEPVLFVRGRD-EEAAKET 77 (384)
T ss_pred cccchHHHHHHHHHHHHHHHHcCCcEEEecCCCceEEEeCCCCCc--ccc-e-EEEEEcCCCceEEEEcchh-HHHHHhh
Confidence 356677899999999999999999999999999999999998521 111 1 234444 456899998543 2233322
Q ss_pred hhc--CCeEEEecc--------cHHHHHHHHHhcCCeEEEeCCC--CcHHHHHHHHHHHHHhhhhccccccccccccCCC
Q 005523 324 LKN--AGVELRPYN--------SILSEIKSLAAQGAQLWLDPSS--VNAAIMNTYEIAIEKYLTSNNNKKSKTKMHTDTT 391 (692)
Q Consensus 324 l~~--~~v~i~~y~--------~~~~~l~~l~~~~~~Igvd~~~--~s~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (692)
... ..+...... .+...++.......++|++... +++..+..++..+
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~--------------------- 136 (384)
T COG0006 78 SWIKLENVEVYEDDEDPAAPLDLLGALLEELGLAGKRIGIESASIFLTLAAFERLQAAL--------------------- 136 (384)
T ss_pred cccccCceEEEecCCccccHHHHHHHHHHhccccccceEEEeccCccCHHHHHHHHhhC---------------------
Confidence 211 122211111 1222233332236789999886 6778788887753
Q ss_pred CCCCCCcceecCCccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHhCCCCCC
Q 005523 392 GQSGGPAGVFRTSPIAFSKAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGFLDT 471 (692)
Q Consensus 392 ~~~~~~~~vd~~~~i~~lR~vKs~~EIe~mR~A~~i~~~a~~~~~~~l~~~i~~~~G~TE~eia~~l~~~~~~~~G~~~~ 471 (692)
+..+++++++++..+|+|||+.||+.||+|+.+++.|+.++++++ ++|+||.|++++++..+. ..|...+
T Consensus 137 ---~~~~~~~~~~~i~~lR~iKs~~EI~~ir~A~~i~~~a~~~~~~~~------~~g~tE~ev~a~l~~~~~-~~G~~~~ 206 (384)
T COG0006 137 ---PRAELVDASDLVDRLRLIKSPAEIAKIRKAAEIADAALEAALEAI------RPGMTEAEIAAELEYALR-KGGAEGP 206 (384)
T ss_pred ---CCCEEeccHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhc------cCCCcHHHHHHHHHHHHH-HcCCCcc
Confidence 344789999999999999999999999999999999999999888 899999999999998754 4677778
Q ss_pred CCceeeeeCCCCccccccCCCCCCcccCCCCeEEEecceeECCeEeeeEeEEEcCCCCHHHHHHHHHHHHHHHHHHHccC
Q 005523 472 SFDTISGSGANGAIIHYKPEPGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIF 551 (692)
Q Consensus 472 ~f~~iv~sG~~~a~~h~~p~~~~~~~l~~Gdiv~iD~g~~~~Gy~aD~tRT~~vG~p~~~~~~~~~~v~~a~~~~~~~~~ 551 (692)
+|++||++|+|++.||+.|++ +.+++||+|+||+|++|+|||+|+||||++|+|+++|+++|+.|++|+.++++++|
T Consensus 207 sf~~iv~~G~n~a~pH~~~~~---~~~~~gd~vliD~G~~~~gY~sDiTRT~~~G~~~~~~~~iy~~V~~aq~aa~~~~r 283 (384)
T COG0006 207 SFDTIVASGENAALPHYTPSD---RKLRDGDLVLIDLGGVYNGYCSDITRTFPIGKPSDEQREIYEAVLEAQEAAIAAIR 283 (384)
T ss_pred CcCcEEeccccccCcCCCCCc---ccccCCCEEEEEeeeEECCccccceeEEecCCCCHHHHHHHHHHHHHHHHHHHHhC
Confidence 999999999999999999988 88999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCChHHHHHHHHHHHHHcCC--CCcCCcccccccCCccccCCCcccccCCCCccccCCCEEEEcceeeecCcceEEEE
Q 005523 552 PQSTPGFVLDAFARSSLWKIGL--DYRHGTGHGVGAALNVHEGPQSISFRYGNMTPLVEGMIVSNEPGYYEDHAFGIRIE 629 (692)
Q Consensus 552 P~G~~~~dv~~~a~~~l~~~G~--~~~h~~GHgIG~~l~~hE~P~~i~~~~~~~~~L~~GMV~siEPgiy~~g~~GiriE 629 (692)
| |+++++|+.++++++++.|+ +|.|++|||||+++++||.|..+. +++..+|++||||++|||+|.+|.+|||||
T Consensus 284 p-G~~~~~vd~~ar~~i~~~g~~~~~~h~~GHgvG~~l~vhE~p~~~~--~~~~~~L~~GMv~t~Epg~y~~g~~GirIE 360 (384)
T COG0006 284 P-GVTGGEVDAAARQVLEKAGYGLYFLHGTGHGVGFVLDVHEHPQYLS--PGSDTTLEPGMVFSIEPGIYIPGGGGVRIE 360 (384)
T ss_pred C-CCcHHHHHHHHHHHHHhcCCcccccCCccccCCCCcccCcCccccC--CCCCccccCCcEEEeccccccCCCceEEEE
Confidence 9 99999999999999999666 799999999999999999995243 458999999999999999999999999999
Q ss_pred EEEEEecCCCCCCCCCccccCeeEccCCCCccc
Q 005523 630 NLLYVKEVGTPNRFGGVSYLGFEKLTFVPIQTK 662 (692)
Q Consensus 630 d~vlVte~~~~~~~~~~~~~G~E~LT~~P~~~~ 662 (692)
|+|+||++ |+|+||..|++..
T Consensus 361 d~vlVte~------------G~e~LT~~~~~~~ 381 (384)
T COG0006 361 DTVLVTED------------GFEVLTRVPKELL 381 (384)
T ss_pred EEEEEcCC------------CceecccCCccee
Confidence 99999999 9999997775543
No 5
>PRK14575 putative peptidase; Provisional
Probab=100.00 E-value=5.8e-57 Score=496.23 Aligned_cols=355 Identities=17% Similarity=0.174 Sum_probs=290.5
Q ss_pred HHHHHHHHHHHcCCCEEEEcccchhhhhcCCCCCCC-CCCcceeeEEEEeCC-c-eE-EEEeCCCCCHHHHhhh--hcCC
Q 005523 255 KLSSLRSDLVDAGSSAIVISMLDEIAWLLNLRGSDV-PHSPVMYAYLIVEMD-R-AK-LFVDDSKVTPDVMDHL--KNAG 328 (692)
Q Consensus 255 Rl~rlr~~m~e~glDallis~~~ni~YLtGf~g~~~-~~~Pv~~a~llvt~~-~-~~-L~vd~~~~~~~~~~~l--~~~~ 328 (692)
-++|+|+.|+++|+|++||++|+|++|||||.+... .++|...+.++|+.+ + +. ++++..+......+.. ....
T Consensus 12 ~~~rlr~~m~~~glD~lvl~~p~n~~ylTG~~~~~~~~~r~~~~~~lvv~~~~~~p~~~i~p~~E~~~~~~~~~~~~~~~ 91 (406)
T PRK14575 12 VSRKLRTIMERDNIDAVIVTTCDNFYHVTGILSFFMYTFRNTGTAIAVVFRDVKIPSLIIMNEFEAASLTLDMPNAELKT 91 (406)
T ss_pred HHHHHHHHHHHcCCCEEeecCcchheeecccccccceecccCCceEEEEEcCCCCCceEEechhhhhhhccccccccccc
Confidence 478999999999999999999999999999987542 345554456778765 3 55 6665433322111110 0001
Q ss_pred e-EE----Eec------------------c----cHHHHHHHHHhcCCeEEEeCCCCcHHHHHHHHHHHHHhhhhccccc
Q 005523 329 V-EL----RPY------------------N----SILSEIKSLAAQGAQLWLDPSSVNAAIMNTYEIAIEKYLTSNNNKK 381 (692)
Q Consensus 329 v-~i----~~y------------------~----~~~~~l~~l~~~~~~Igvd~~~~s~~~~~~L~~~~~~~~~~~~~~~ 381 (692)
+ .+ .+| + .+.+.|++.+...++||+|.+.++...++.|+..+
T Consensus 92 ~~~~~d~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~igve~~~~~~~~~~~l~~~l----------- 160 (406)
T PRK14575 92 FPVWVDVDDPFNMRDSANNNKERPIGPPIESVCNILKDALNDARVLNKKIAIDLNIMSNGGKRVIDAVM----------- 160 (406)
T ss_pred CCceEeeeccccccchhhhhhcCCCCCCHHHHHHHHHHHHHhcCCcCCEEEEccCCCCHHHHHHHHHhC-----------
Confidence 1 11 123 1 11233333333468999999999999999988753
Q ss_pred cccccccCCCCCCCCCcceecCCccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHH
Q 005523 382 SKTKMHTDTTGQSGGPAGVFRTSPIAFSKAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEF 461 (692)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~vd~~~~i~~lR~vKs~~EIe~mR~A~~i~~~a~~~~~~~l~~~i~~~~G~TE~eia~~l~~~ 461 (692)
|+++++|++.++..+|+|||++||+.||+|++++++++.++++.+ +||+||.||++.+...
T Consensus 161 -------------p~~~~~d~~~~l~~lR~iKs~~EI~~~r~A~~i~~~a~~~~~~~i------~pG~tE~elaa~~~~~ 221 (406)
T PRK14575 161 -------------PNVDFVDSSSIFNELRVIKSPWEIKRLRKSAEITEYGITEASKLI------RVGCTSAELTAAYKAA 221 (406)
T ss_pred -------------CCCeEEEcHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhc------cCCCCHHHHHHHHHHH
Confidence 678899999999999999999999999999999999999888776 9999999999999765
Q ss_pred HHHhCCCCCCCCceeeeeCCCCccccccCCCCCCcccCCCCeEEEecceeECCeEeeeEeEEEcCCCCHHHHHHHHHHHH
Q 005523 462 RSKQSGFLDTSFDTISGSGANGAIIHYKPEPGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQ 541 (692)
Q Consensus 462 ~~~~~G~~~~~f~~iv~sG~~~a~~h~~p~~~~~~~l~~Gdiv~iD~g~~~~Gy~aD~tRT~~vG~p~~~~~~~~~~v~~ 541 (692)
... .|....++.+++++|++ +.+|+.|++ +++++||+|++|+|+.|+||++|+||||++|+|+++++++|+++++
T Consensus 222 ~~~-~g~~~~~~~~~v~~G~~-~~~h~~~~~---~~l~~Gd~v~iD~g~~~~GY~sditRT~~vG~~~~~~~~~~~~~~~ 296 (406)
T PRK14575 222 VMS-KSETHFSRFHLISVGAD-FSPKLIPSN---TKACSGDLIKFDCGVDVDGYGADIARTFVVGEPPEITRKIYQTIRT 296 (406)
T ss_pred HHH-cCCCcCCcCceEEECCC-cccCCCCCC---CcCCCCCEEEEEeceEECCEeeeeEEEEECCCCCHHHHHHHHHHHH
Confidence 443 34433444478889987 568998876 8999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHccCCCCCChHHHHHHHHHHHHHcCC--CCcCCcccccccCCccccCCCcccccCCCCccccCCCEEEEcceee
Q 005523 542 GHIALDQAIFPQSTPGFVLDAFARSSLWKIGL--DYRHGTGHGVGAALNVHEGPQSISFRYGNMTPLVEGMIVSNEPGYY 619 (692)
Q Consensus 542 a~~~~~~~~~P~G~~~~dv~~~a~~~l~~~G~--~~~h~~GHgIG~~l~~hE~P~~i~~~~~~~~~L~~GMV~siEPgiy 619 (692)
++.++++++|| |++++||++++++++++.|+ .+.|++|||||+++++||.|. +.. +++.+|++||||++|||+|
T Consensus 297 a~~~~~~~~rp-G~~~~dv~~a~~~~~~~~G~~~~~~~~~GHGiG~~lg~~e~P~-i~~--~~~~~Le~GMv~tiEpgiy 372 (406)
T PRK14575 297 GHEHMLSMVAP-GVKMKDVFDSTMEVIKKSGLPNYNRGHLGHGNGVFLGLEESPF-VST--HATESFTSGMVLSLETPYY 372 (406)
T ss_pred HHHHHHHHcCC-CCcHHHHHHHHHHHHHHcCCccccCCCCCCcccCCCCCccCCC-CCC--CCCCCcCCCCEEEECCeee
Confidence 99999999999 99999999999999999999 367999999996668999997 542 4789999999999999999
Q ss_pred ecCcceEEEEEEEEEecCCCCCCCCCccccCeeEccCCCCc
Q 005523 620 EDHAFGIRIENLLYVKEVGTPNRFGGVSYLGFEKLTFVPIQ 660 (692)
Q Consensus 620 ~~g~~GiriEd~vlVte~~~~~~~~~~~~~G~E~LT~~P~~ 660 (692)
.++.+|+|+||+|+||++ |+|+||.+|++
T Consensus 373 ~~g~gGvriEDtvlVT~~------------G~e~LT~~p~~ 401 (406)
T PRK14575 373 GYNLGSIMIEDMILINKE------------GIEFLSKLPRD 401 (406)
T ss_pred cCCCcEEEEEeEEEEcCC------------CcccCCCCCcc
Confidence 999999999999999999 99999999944
No 6
>PRK14576 putative endopeptidase; Provisional
Probab=100.00 E-value=1.2e-55 Score=485.53 Aligned_cols=354 Identities=17% Similarity=0.169 Sum_probs=288.4
Q ss_pred HHHHHHHHHHHcCCCEEEEcccchhhhhcCCCCCCC-CCCcceeeEEEEeCC--ce-EEEEeCCCCCHHHH-----hhhh
Q 005523 255 KLSSLRSDLVDAGSSAIVISMLDEIAWLLNLRGSDV-PHSPVMYAYLIVEMD--RA-KLFVDDSKVTPDVM-----DHLK 325 (692)
Q Consensus 255 Rl~rlr~~m~e~glDallis~~~ni~YLtGf~g~~~-~~~Pv~~a~llvt~~--~~-~L~vd~~~~~~~~~-----~~l~ 325 (692)
-.+|+|+.|+++|+|++|+++|+||+||||+....+ .+++....+++++.+ ++ .++++..+... ++ ..+.
T Consensus 12 ~~~r~r~~M~~~gldalll~~p~ni~YlTG~~~~~~~~~r~~~~~v~v~~~d~~~p~~~i~~~~e~~~-~~~~~~~~~~~ 90 (405)
T PRK14576 12 VSRKARVVMEREGIDALVVTVCDNFYYLTGFASFFMYTFRHTGAAVAIMFRDANIPSQIIMNEFEAAS-THFDMPNSVLK 90 (405)
T ss_pred HHHHHHHHHHHcCCCEEEeccccceeeeccccccceeeeccCCeEEEEecCCCCCCcEEEechhhhhh-hhccccccccc
Confidence 356899999999999999999999999999997632 233433455555544 34 56765432221 11 0111
Q ss_pred cCCeEE---Eec---------------------ccHHHHHHHHHhcCCeEEEeCCCCcHHHHHHHHHHHHHhhhhccccc
Q 005523 326 NAGVEL---RPY---------------------NSILSEIKSLAAQGAQLWLDPSSVNAAIMNTYEIAIEKYLTSNNNKK 381 (692)
Q Consensus 326 ~~~v~i---~~y---------------------~~~~~~l~~l~~~~~~Igvd~~~~s~~~~~~L~~~~~~~~~~~~~~~ 381 (692)
...+.. .++ +.+.+.|++++...++||+|.+.++...+..|...+
T Consensus 91 ~~~~~~d~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~rigve~~~~~~~~~~~l~~~~----------- 159 (405)
T PRK14576 91 TFPVWVDVDDPRNPHHHYKKRDRPIGPPVEAVFSLVKNALEDAGVLDKTIAIELQAMSNGGKGVLDKVA----------- 159 (405)
T ss_pred cCCceEeecCCcccchhhhccccCCCCcHHHHHHHHHHHHHHhCCCCCEEEEccCCCCHHHHHHHHhhC-----------
Confidence 100100 011 122234444444568999999988888888887643
Q ss_pred cccccccCCCCCCCCCcceecCCccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHH
Q 005523 382 SKTKMHTDTTGQSGGPAGVFRTSPIAFSKAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEF 461 (692)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~vd~~~~i~~lR~vKs~~EIe~mR~A~~i~~~a~~~~~~~l~~~i~~~~G~TE~eia~~l~~~ 461 (692)
|+++++|++.++..+|+|||++||+.||+|+++++.++.++++.+ ++|+||.|+++.++..
T Consensus 160 -------------~~~~~vd~~~~l~~lR~iKs~~EI~~~r~A~~i~~~~~~~~~~~i------~pG~tE~elaa~~~~~ 220 (405)
T PRK14576 160 -------------PGLKLVDSTALFNEIRMIKSPWEIEHLRKSAEITEYGIASAAKKI------RVGCTAAELTAAFKAA 220 (405)
T ss_pred -------------CCCeEEEcHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHhc------cCCCCHHHHHHHHHHH
Confidence 678999999999999999999999999999999999999888776 9999999999999865
Q ss_pred HHHhCCCCCCCCceeeeeCCCCccccccCCCCCCcccCCCCeEEEecceeECCeEeeeEeEEEcCCCCHHHHHHHHHHHH
Q 005523 462 RSKQSGFLDTSFDTISGSGANGAIIHYKPEPGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQ 541 (692)
Q Consensus 462 ~~~~~G~~~~~f~~iv~sG~~~a~~h~~p~~~~~~~l~~Gdiv~iD~g~~~~Gy~aD~tRT~~vG~p~~~~~~~~~~v~~ 541 (692)
.. ..|....++.+++++|++ +.+|+.|++ +.+++||+|++|+|+.|+||++|+||||++|+|+++++++|+++++
T Consensus 221 ~~-~~g~~~~~~~~~v~~G~~-~~~h~~~~~---~~l~~Gd~v~~d~g~~~~GY~sd~tRT~~~G~p~~~~~~~~~~~~~ 295 (405)
T PRK14576 221 VM-SFPETNFSRFNLISVGDN-FSPKIIADT---TPAKVGDLIKFDCGIDVAGYGADLARTFVLGEPDKLTQQIYDTIRT 295 (405)
T ss_pred HH-HcCCCcCCCCCEEEECCc-ccCCCCCCC---cccCCCCEEEEEeceeECCEEeeeeEEEECCCCCHHHHHHHHHHHH
Confidence 43 345333444488999999 568999887 8999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHccCCCCCChHHHHHHHHHHHHHcCC--CCcCCcccccccCCccccCCCcccccCCCCccccCCCEEEEcceee
Q 005523 542 GHIALDQAIFPQSTPGFVLDAFARSSLWKIGL--DYRHGTGHGVGAALNVHEGPQSISFRYGNMTPLVEGMIVSNEPGYY 619 (692)
Q Consensus 542 a~~~~~~~~~P~G~~~~dv~~~a~~~l~~~G~--~~~h~~GHgIG~~l~~hE~P~~i~~~~~~~~~L~~GMV~siEPgiy 619 (692)
++.++++++|| |++++||++++++++.+.|+ .+.|++|||||+++++||.|. +. ++++.+|++||||++||++|
T Consensus 296 a~~a~~~~~rP-G~~~~dv~~a~~~~~~~~G~~~~~~~~~GHgiG~~l~~~e~P~-i~--~~~~~~Le~GMv~~vEp~~y 371 (405)
T PRK14576 296 GHEHMLSMVAP-GVKLKAVFDSTMAVIKTSGLPHYNRGHLGHGDGVFLGLEEVPF-VS--TQATETFCPGMVLSLETPYY 371 (405)
T ss_pred HHHHHHHHcCC-CCcHHHHHHHHHHHHHHcCCccccCCCCCCCCCCCCCcCcCCC-cC--CCCCCccCCCCEEEECCcee
Confidence 99999999999 99999999999999999998 367899999997778999997 54 35889999999999999999
Q ss_pred ecCcceEEEEEEEEEecCCCCCCCCCccccCeeEccCCCCc
Q 005523 620 EDHAFGIRIENLLYVKEVGTPNRFGGVSYLGFEKLTFVPIQ 660 (692)
Q Consensus 620 ~~g~~GiriEd~vlVte~~~~~~~~~~~~~G~E~LT~~P~~ 660 (692)
.+|.+|+|+||+|+||++ |+|+||..|++
T Consensus 372 ~~g~ggvriEDtvlVTe~------------G~e~LT~~p~~ 400 (405)
T PRK14576 372 GIGVGSIMLEDMILITDS------------GFEFLSKLDRD 400 (405)
T ss_pred ecCCCEEEEeeEEEECCC------------ccccCCCCCcc
Confidence 999999999999999999 99999999944
No 7
>PRK10879 proline aminopeptidase P II; Provisional
Probab=100.00 E-value=3.9e-50 Score=445.19 Aligned_cols=362 Identities=20% Similarity=0.244 Sum_probs=283.1
Q ss_pred cchhHHHHHHHHHHHHHHcCCCEEEEcc----------------cchhhhhcCCCCCCCCCCcceeeEEEEeC-C----c
Q 005523 248 AGLDVASKLSSLRSDLVDAGSSAIVISM----------------LDEIAWLLNLRGSDVPHSPVMYAYLIVEM-D----R 306 (692)
Q Consensus 248 s~~e~~~Rl~rlr~~m~e~glDallis~----------------~~ni~YLtGf~g~~~~~~Pv~~a~llvt~-~----~ 306 (692)
+..+|..|+++|.+.|.+.. ++||.+ ..|+.||||+.-.+ +++++.+ + .
T Consensus 2 ~~~~~~~rR~~l~~~~~~~~--~~v~~~~~~~~~~~d~~y~Frq~s~F~YltG~~ep~--------~~lv~~~~~~~~~~ 71 (438)
T PRK10879 2 TQQEFQRRRQALLAKMQPGS--AALIFAAPEATRSADSEYPYRQNSDFWYFTGFNEPE--------AVLVLIKSDDTHNH 71 (438)
T ss_pred ChHHHHHHHHHHHhhCCCCc--EEEEeCCCccccCCCCCCCccCCCceeeeeCCCCCC--------eEEEEecCCCCCCe
Confidence 45689999999999997643 344432 24799999987543 5555533 2 3
Q ss_pred eEEEEeCCCCCHH--------HHhhhhcCCe-EEEecccHHHHHHHHHhcCCeEEEeCCCCc------HHHHHHHHHHHH
Q 005523 307 AKLFVDDSKVTPD--------VMDHLKNAGV-ELRPYNSILSEIKSLAAQGAQLWLDPSSVN------AAIMNTYEIAIE 371 (692)
Q Consensus 307 ~~L~vd~~~~~~~--------~~~~l~~~~v-~i~~y~~~~~~l~~l~~~~~~Igvd~~~~s------~~~~~~L~~~~~ 371 (692)
.+||++......+ ..+.....++ ++.+++++.+.|.++......+..+....+ ...++.+.....
T Consensus 72 ~~Lf~~~~d~~~e~W~G~~~~~~~a~~~~g~d~v~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (438)
T PRK10879 72 SVLFNRVRDLTAEIWFGRRLGQDAAPEKLGVDRALPFSEINQQLYQLLNGLDVVYHAQGEYAYADEIVFSALEKLRKGSR 151 (438)
T ss_pred EEEEeCCCCCCccEEcCcCCCHHHHHHHhCCCEEeeHHHHHHHHHHHhcCCceEEecCCccccchhHHHHHHHHHHhhhc
Confidence 5899864321111 1111112345 478888999888887655555665544322 112222222100
Q ss_pred HhhhhccccccccccccCCCCCCCCCcceecCCccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCH
Q 005523 372 KYLTSNNNKKSKTKMHTDTTGQSGGPAGVFRTSPIAFSKAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTE 451 (692)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~i~~lR~vKs~~EIe~mR~A~~i~~~a~~~~~~~l~~~i~~~~G~TE 451 (692)
....+...++|+..++..+|+|||++||+.||+|+.+++.++.++++.+ ++|+||
T Consensus 152 -------------------~~~~~~~~~~d~~~~l~~lR~iKs~~EI~~~r~A~~i~~~a~~~~~~~~------~pG~tE 206 (438)
T PRK10879 152 -------------------QNLTAPATLTDWRPWVHEMRLFKSPEEIAVLRRAGEISALAHTRAMEKC------RPGMFE 206 (438)
T ss_pred -------------------cccCCcccchHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhc------CCCCcH
Confidence 0112446788999999999999999999999999999999999888776 999999
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCceeeeeCCCCccccccCCCCCCcccCCCCeEEEecceeECCeEeeeEeEEEc-CCCCH
Q 005523 452 VDVADKLLEFRSKQSGFLDTSFDTISGSGANGAIIHYKPEPGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHF-GEPTA 530 (692)
Q Consensus 452 ~eia~~l~~~~~~~~G~~~~~f~~iv~sG~~~a~~h~~p~~~~~~~l~~Gdiv~iD~g~~~~Gy~aD~tRT~~v-G~p~~ 530 (692)
.||++.++.... ..|...++|++++++|.|++.+||.|++ +.|++||+|++|+|+.|+||++|+||||++ |++++
T Consensus 207 ~ei~a~~~~~~~-~~G~~~~~~~~iv~~G~na~~~H~~~~~---~~l~~GDlVliD~G~~~~GY~sDitRT~~v~G~~s~ 282 (438)
T PRK10879 207 YQLEGEIHHEFN-RHGARYPSYNTIVGSGENGCILHYTENE---SEMRDGDLVLIDAGCEYKGYAGDITRTFPVNGKFTP 282 (438)
T ss_pred HHHHHHHHHHHH-HCCCCCCCCCcEEEEcCccccccCCCCc---cccCCCCEEEEEeCeEECCEEEEeEEEEEECCcCCH
Confidence 999999876543 4677778899999999999999999976 889999999999999999999999999998 89999
Q ss_pred HHHHHHHHHHHHHHHHHHccCCCCCChHHHHHHHHHHHH------------------HcCC--CCcCCcccccccCCccc
Q 005523 531 REKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLW------------------KIGL--DYRHGTGHGVGAALNVH 590 (692)
Q Consensus 531 ~~~~~~~~v~~a~~~~~~~~~P~G~~~~dv~~~a~~~l~------------------~~G~--~~~h~~GHgIG~~l~~h 590 (692)
+|+++|+++++++.++++++|| |+++++|+.++.+.+. +.|+ ++.|++||+|| +++|
T Consensus 283 ~q~~~y~~vl~a~~aai~~~kp-G~~~~~v~~~~~~~~~~~l~~~Gl~~~~~~~~~~~~~~~~~~~Hg~GH~iG--ldvH 359 (438)
T PRK10879 283 AQREIYDIVLESLETSLRLYRP-GTSIREVTGEVVRIMVSGLVKLGILKGDVDQLIAENAHRPFFMHGLSHWLG--LDVH 359 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHcCC-CCcHHHHHHHHHHHHHHHHHHhCCcCCCHHHHHHhccCccccCCCCccccC--cCcC
Confidence 9999999999999999999999 9999999999886543 2343 57999999999 9999
Q ss_pred cCCCcccccCCCCccccCCCEEEEcceeeecC---------cceEEEEEEEEEecCCCCCCCCCccccCeeEccC-CCCc
Q 005523 591 EGPQSISFRYGNMTPLVEGMIVSNEPGYYEDH---------AFGIRIENLLYVKEVGTPNRFGGVSYLGFEKLTF-VPIQ 660 (692)
Q Consensus 591 E~P~~i~~~~~~~~~L~~GMV~siEPgiy~~g---------~~GiriEd~vlVte~~~~~~~~~~~~~G~E~LT~-~P~~ 660 (692)
|.|. +. ++++.+|++||||+||||+|.+. .+|+|+||+|+||++ |+|+||. +|++
T Consensus 360 d~~~-~~--~~~~~~L~~GmV~tvEPgiY~~~~~~~~~~~~~~GiRiED~VlVT~~------------G~e~LT~~~pk~ 424 (438)
T PRK10879 360 DVGV-YG--QDRSRILEPGMVLTVEPGLYIAPDADVPEQYRGIGIRIEDDIVITET------------GNENLTASVVKK 424 (438)
T ss_pred cCCC-cC--CCCCCcCCCCCEEEECCEEEECCCcCcccccCccEEEeccEEEECCC------------cCeEcCccCCCC
Confidence 9886 33 34789999999999999999863 369999999999999 9999995 8988
Q ss_pred ccchhh
Q 005523 661 TKLVDL 666 (692)
Q Consensus 661 ~~li~~ 666 (692)
.+.|+.
T Consensus 425 ~~~iE~ 430 (438)
T PRK10879 425 PDEIEA 430 (438)
T ss_pred HHHHHH
Confidence 877764
No 8
>PRK15173 peptidase; Provisional
Probab=100.00 E-value=9.1e-50 Score=426.10 Aligned_cols=277 Identities=19% Similarity=0.198 Sum_probs=242.2
Q ss_pred ecccHHHHHHH----HHhcCCeEEEeCCCCcHHHHHHHHHHHHHhhhhccccccccccccCCCCCCCCCcceecCCcccc
Q 005523 333 PYNSILSEIKS----LAAQGAQLWLDPSSVNAAIMNTYEIAIEKYLTSNNNKKSKTKMHTDTTGQSGGPAGVFRTSPIAF 408 (692)
Q Consensus 333 ~y~~~~~~l~~----l~~~~~~Igvd~~~~s~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~i~~ 408 (692)
+.+.+.+.|++ ++...++||+|.+.++...++.|++.+ |+++++|+++++..
T Consensus 36 ~~~~~~~~l~~~l~~~g~~~~rigve~~~~~~~~~~~l~~~l------------------------~~~~~~d~~~~i~~ 91 (323)
T PRK15173 36 PIESVCNILKDALNDARVLNKKIAIDLNIMSNGGKRVIDAVM------------------------PNVDFVDSSSIFNE 91 (323)
T ss_pred cHHHHHHHHHHHHHHcCccCCEEEEecCccCHHHHHHHHhhC------------------------CCCeEEEhHHHHHH
Confidence 34444444444 444568999999999999999988753 67889999999999
Q ss_pred ccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHhCCCCCCCCceeeeeCCCCccccc
Q 005523 409 SKAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGFLDTSFDTISGSGANGAIIHY 488 (692)
Q Consensus 409 lR~vKs~~EIe~mR~A~~i~~~a~~~~~~~l~~~i~~~~G~TE~eia~~l~~~~~~~~G~~~~~f~~iv~sG~~~a~~h~ 488 (692)
+|+||||+||+.||+|+++++.++.++++.+ ++|+||.|+++.++..... .|....++.+++++|++ ..+|+
T Consensus 92 lR~iKs~~EI~~mr~A~~i~~~~~~~~~~~i------~~G~tE~el~a~~~~~~~~-~g~~~~~~~~~i~~G~~-~~~h~ 163 (323)
T PRK15173 92 LRVIKSPWEIKRLRKSAEITEYGITEASKLI------RVGCTSAELTAAYKAAVMS-KSETHFSRFHLISVGAD-FSPKL 163 (323)
T ss_pred HHccCCHHHHHHHHHHHHHHHHHHHHHHHHc------cCCCCHHHHHHHHHHHHHH-cCCCCCCCCcEEEECCC-CccCC
Confidence 9999999999999999999999998887766 9999999999999765443 34434444467888887 45898
Q ss_pred cCCCCCCcccCCCCeEEEecceeECCeEeeeEeEEEcCCCCHHHHHHHHHHHHHHHHHHHccCCCCCChHHHHHHHHHHH
Q 005523 489 KPEPGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSL 568 (692)
Q Consensus 489 ~p~~~~~~~l~~Gdiv~iD~g~~~~Gy~aD~tRT~~vG~p~~~~~~~~~~v~~a~~~~~~~~~P~G~~~~dv~~~a~~~l 568 (692)
.|++ +.+++||+|++|+|+.|+||++|+||||++|+|+++|+++|+++++++.++++++|| |+++++|++++++++
T Consensus 164 ~~~~---~~l~~Gd~V~iD~g~~~~GY~aDitRT~~vG~p~~~~~~~y~~v~ea~~~~~~~irP-G~~~~dv~~a~~~~~ 239 (323)
T PRK15173 164 IPSN---TKACSGDLIKFDCGVDVDGYGADIARTFVVGEPPEITRKIYQTIRTGHEHMLSMVAP-GVKMKDVFDSTMEVI 239 (323)
T ss_pred CCCC---CccCCCCEEEEEeCccCCCEeeeeEEEEEcCCCCHHHHHHHHHHHHHHHHHHHHcCC-CCcHHHHHHHHHHHH
Confidence 8876 899999999999999999999999999999999999999999999999999999999 999999999999999
Q ss_pred HHcCC--CCcCCcccccccCCccccCCCcccccCCCCccccCCCEEEEcceeeecCcceEEEEEEEEEecCCCCCCCCCc
Q 005523 569 WKIGL--DYRHGTGHGVGAALNVHEGPQSISFRYGNMTPLVEGMIVSNEPGYYEDHAFGIRIENLLYVKEVGTPNRFGGV 646 (692)
Q Consensus 569 ~~~G~--~~~h~~GHgIG~~l~~hE~P~~i~~~~~~~~~L~~GMV~siEPgiy~~g~~GiriEd~vlVte~~~~~~~~~~ 646 (692)
++.|+ .+.|++|||||+++++||.|. +.. +++.+|++||||++|||+|.++.+|+|+||+|+||++
T Consensus 240 ~~~G~~~~~~~~~GHGiG~~lg~~E~P~-i~~--~~~~~Le~GMV~tiEPgiy~~g~ggvriEDtvlVTe~--------- 307 (323)
T PRK15173 240 KKSGLPNYNRGHLGHGNGVFLGLEESPF-VST--HATESFTSGMVLSLETPYYGYNLGSIMIEDMILINKE--------- 307 (323)
T ss_pred HHcCCccccCCCCCCcCCCCCCcCCCCC-CCC--CCCCccCCCCEEEECCEEEcCCCcEEEEeeEEEEcCC---------
Confidence 99998 366899999997679999998 442 4789999999999999999999999999999999999
Q ss_pred cccCeeEccCCCCc
Q 005523 647 SYLGFEKLTFVPIQ 660 (692)
Q Consensus 647 ~~~G~E~LT~~P~~ 660 (692)
|+|+||.+|++
T Consensus 308 ---G~e~LT~~p~~ 318 (323)
T PRK15173 308 ---GIEFLSKLPRD 318 (323)
T ss_pred ---cceeCCCCCcc
Confidence 99999999944
No 9
>PRK13607 proline dipeptidase; Provisional
Probab=100.00 E-value=1.8e-44 Score=398.95 Aligned_cols=233 Identities=25% Similarity=0.278 Sum_probs=199.8
Q ss_pred cceecCCccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHhCCCCCCCCceee
Q 005523 398 AGVFRTSPIAFSKAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGFLDTSFDTIS 477 (692)
Q Consensus 398 ~~vd~~~~i~~lR~vKs~~EIe~mR~A~~i~~~a~~~~~~~l~~~i~~~~G~TE~eia~~l~~~~~~~~G~~~~~f~~iv 477 (692)
...+....|..+|+|||++||+.||+|++++++++.++++.+ ++|+||.|+++.+... ...+....+|++|+
T Consensus 147 ~~~~l~~~l~~lR~iKs~~EI~~mr~A~~i~~~a~~~~~~~i------~pG~tE~ei~~~~~~~--~~~~~~~~~y~~iv 218 (443)
T PRK13607 147 NPKGVLDYLHYHRAYKTDYELACMREAQKIAVAGHRAAKEAF------RAGMSEFDINLAYLTA--TGQRDNDVPYGNIV 218 (443)
T ss_pred ChHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHh------hcCCCHHHHHHHHHHH--hCCCCcCCCCCcEE
Confidence 345567778999999999999999999999999999888776 8999999999876432 23344567899999
Q ss_pred eeCCCCccccccCCCCCCcccCCCCeEEEecceeECCeEeeeEeEEEcCCCCHHHHHHHHHHHHHHHHHHHccCCCCCCh
Q 005523 478 GSGANGAIIHYKPEPGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFPQSTPG 557 (692)
Q Consensus 478 ~sG~~~a~~h~~p~~~~~~~l~~Gdiv~iD~g~~~~Gy~aD~tRT~~vG~p~~~~~~~~~~v~~a~~~~~~~~~P~G~~~ 557 (692)
++|+|++++||.+++ .+.+++||+|++|+|+.|+||++|+||||+ |+++++++++|+++++++.++++++|| |+++
T Consensus 219 a~G~naa~~H~~~~~--~~~~~~Gd~vliD~Ga~~~GY~sDiTRTf~-g~~~~~~~~ly~~v~~aq~aai~~ikP-G~~~ 294 (443)
T PRK13607 219 ALNEHAAVLHYTKLD--HQAPAEMRSFLIDAGAEYNGYAADITRTYA-AKEDNDFAALIKDVNKEQLALIATMKP-GVSY 294 (443)
T ss_pred EecCcceEecCCccC--CCCCCCCCEEEEEeeEEECCEEecceEEEe-cCCCHHHHHHHHHHHHHHHHHHHHccC-CCCH
Confidence 999999999999876 246899999999999999999999999999 888999999999999999999999999 9999
Q ss_pred HHHHHHHHHHHHH------------------cCC---CCcCCcccccccCCccccCCCccc-------------ccCCCC
Q 005523 558 FVLDAFARSSLWK------------------IGL---DYRHGTGHGVGAALNVHEGPQSIS-------------FRYGNM 603 (692)
Q Consensus 558 ~dv~~~a~~~l~~------------------~G~---~~~h~~GHgIG~~l~~hE~P~~i~-------------~~~~~~ 603 (692)
.||+.++++++.+ .|+ +|+|++||+|| |++||.+.... +...+.
T Consensus 295 ~dv~~aa~~~i~~~L~~~Gl~~g~~~~~~~~~g~~~~~f~HglGH~iG--ldvHd~~~~~~~~~~~~~~~~~~~~~l~~~ 372 (443)
T PRK13607 295 VDLHIQMHQRIAKLLRKFQIVTGLSEEAMVEQGITSPFFPHGLGHPLG--LQVHDVAGFMQDDRGTHLAAPEKHPYLRCT 372 (443)
T ss_pred HHHHHHHHHHHHHHHHHcCCCCCCCHHHHHhCCCceEecCCCccCccC--cccccCCCcccccccccccccccccccccC
Confidence 9999999876632 233 47899999999 99999753100 001256
Q ss_pred ccccCCCEEEEcceeeecC-------------------------cceEEEEEEEEEecCCCCCCCCCccccCeeEccC
Q 005523 604 TPLVEGMIVSNEPGYYEDH-------------------------AFGIRIENLLYVKEVGTPNRFGGVSYLGFEKLTF 656 (692)
Q Consensus 604 ~~L~~GMV~siEPgiy~~g-------------------------~~GiriEd~vlVte~~~~~~~~~~~~~G~E~LT~ 656 (692)
.+|++|||||||||+|+++ .|||||||+|+||++ |+|+||.
T Consensus 373 ~~L~~GmV~TvEPGiY~~~~ll~~~~~~~~~~~in~~~i~~~~~~GGvRIED~vlVT~~------------G~e~Lt~ 438 (443)
T PRK13607 373 RVLEPGMVLTIEPGLYFIDSLLAPLREGPFSKHFNWQKIDALKPFGGIRIEDNVVVHEN------------GVENMTR 438 (443)
T ss_pred CcCCCCcEEEECCeeeeChhhhchhhhhhhhhhccHHHHHhhcCCCEEeecceEEEcCC------------CCeECCh
Confidence 8999999999999999974 579999999999999 9999995
No 10
>PRK12897 methionine aminopeptidase; Reviewed
Probab=100.00 E-value=1.7e-44 Score=372.70 Aligned_cols=221 Identities=18% Similarity=0.181 Sum_probs=200.6
Q ss_pred ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHhCCCC-----CCCCceeeeeCCCCcc
Q 005523 411 AVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGFL-----DTSFDTISGSGANGAI 485 (692)
Q Consensus 411 ~vKs~~EIe~mR~A~~i~~~a~~~~~~~l~~~i~~~~G~TE~eia~~l~~~~~~~~G~~-----~~~f~~iv~sG~~~a~ 485 (692)
.||||+||+.||+|+++++.++.++++.+ ++|+||.|+++.++.... ..|.. ..+|++++++|+|++.
T Consensus 3 ~iKs~~EI~~~r~A~~i~~~~~~~~~~~~------~~G~tE~el~~~~~~~~~-~~G~~~~~~~~~~~~~~i~~g~n~~~ 75 (248)
T PRK12897 3 TIKTKNEIDLMHESGKLLASCHREIAKIM------KPGITTKEINTFVEAYLE-KHGATSEQKGYNGYPYAICASVNDEM 75 (248)
T ss_pred eeCCHHHHHHHHHHHHHHHHHHHHHHhhc------CCCCcHHHHHHHHHHHHH-HcCCcccccccCCCCcceEeccCCEe
Confidence 69999999999999999999998887766 999999999999987643 45554 2478888999999999
Q ss_pred ccccCCCCCCcccCCCCeEEEecceeECCeEeeeEeEEEcCCCCHHHHHHHHHHHHHHHHHHHccCCCCCChHHHHHHHH
Q 005523 486 IHYKPEPGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFPQSTPGFVLDAFAR 565 (692)
Q Consensus 486 ~h~~p~~~~~~~l~~Gdiv~iD~g~~~~Gy~aD~tRT~~vG~p~~~~~~~~~~v~~a~~~~~~~~~P~G~~~~dv~~~a~ 565 (692)
+|+.|++ ++|++||+|++|+|+.|+||++|++|||++|+|+++++++|+++++++.+++++++| |++++||+.+++
T Consensus 76 ~H~~p~~---~~l~~Gd~V~iD~g~~~~GY~sD~tRT~~vG~~s~~~~~~~~~~~~a~~~~i~~~kp-G~~~~dv~~a~~ 151 (248)
T PRK12897 76 CHAFPAD---VPLTEGDIVTIDMVVNLNGGLSDSAWTYRVGKVSDEAEKLLLVAENALYKGIDQAVI-GNRVGDIGYAIE 151 (248)
T ss_pred ecCCCCC---cccCCCCEEEEEeeEEECCEEEEEEEEEEcCCCCHHHHHHHHHHHHHHHHHHHhhcC-CCccchHHHHHH
Confidence 9999986 899999999999999999999999999999999999999999999999999999999 999999999999
Q ss_pred HHHHHcCCC-CcCCcccccccCCccccCCCcccc-cCCCCccccCCCEEEEcceee-----------------ecCcceE
Q 005523 566 SSLWKIGLD-YRHGTGHGVGAALNVHEGPQSISF-RYGNMTPLVEGMIVSNEPGYY-----------------EDHAFGI 626 (692)
Q Consensus 566 ~~l~~~G~~-~~h~~GHgIG~~l~~hE~P~~i~~-~~~~~~~L~~GMV~siEPgiy-----------------~~g~~Gi 626 (692)
+++++.|+. +.|.+||||| +++||.|.+... ++++..+|++||||++||++| .+|.+|+
T Consensus 152 ~~~~~~g~~~~~~~~GHgiG--l~~hE~P~i~~~~~~~~~~~l~~Gmv~tiEP~~~~~~~~~~~~~~~~~~~~~~g~~g~ 229 (248)
T PRK12897 152 SYVANEGFSVARDFTGHGIG--KEIHEEPAIFHFGKQGQGPELQEGMVITIEPIVNVGMRYSKVDLNGWTARTMDGKLSA 229 (248)
T ss_pred HHHHHcCCccCCCeEECccC--CcccCCCccCCCCCCCCCCCcCCCCEEEECCeEecCCCceEECCCCcEEEcCCCCeEe
Confidence 999999994 6899999999 999999984322 235788999999999999999 3677899
Q ss_pred EEEEEEEEecCCCCCCCCCccccCeeEccC
Q 005523 627 RIENLLYVKEVGTPNRFGGVSYLGFEKLTF 656 (692)
Q Consensus 627 riEd~vlVte~~~~~~~~~~~~~G~E~LT~ 656 (692)
|+||||+||++ |+|+||.
T Consensus 230 r~edtv~Vt~~------------G~e~lt~ 247 (248)
T PRK12897 230 QYEHTIAITKD------------GPIILTK 247 (248)
T ss_pred ecceEEEEeCC------------ccEEeec
Confidence 99999999999 9999995
No 11
>PRK07281 methionine aminopeptidase; Reviewed
Probab=100.00 E-value=3.5e-44 Score=374.80 Aligned_cols=227 Identities=18% Similarity=0.159 Sum_probs=202.3
Q ss_pred cccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHhCCC-------C--CCCCceeeeeC
Q 005523 410 KAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGF-------L--DTSFDTISGSG 480 (692)
Q Consensus 410 R~vKs~~EIe~mR~A~~i~~~a~~~~~~~l~~~i~~~~G~TE~eia~~l~~~~~~~~G~-------~--~~~f~~iv~sG 480 (692)
..+||++||+.||+|++++++++.++.+.+ +||+||.||++.++....+ .|+ . ..+|++++++|
T Consensus 2 ~~iKs~~EI~~mr~A~~i~~~~~~~~~~~i------~pG~te~ei~~~~~~~~~~-~g~~~~~~G~~~~~~~f~~~v~~G 74 (286)
T PRK07281 2 ITLKSAREIEAMDRAGDFLASIHIGLRDLI------KPGVDMWEVEEYVRRRCKE-ENVLPLQIGVDGAMMDYPYATCCG 74 (286)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHHHHHC------cCCCcHHHHHHHHHHHHHH-cCCcccccCCCCcccCCCcceEEe
Confidence 469999999999999999999988776666 9999999999999876433 332 2 25799999999
Q ss_pred CCCccccccCCCCCCcccCCCCeEEEecce---------------------------eECCeEeeeEeEEEcCCCCHHHH
Q 005523 481 ANGAIIHYKPEPGKCSVVDSKKLFLLDSGA---------------------------QYVDGTTDITRTVHFGEPTAREK 533 (692)
Q Consensus 481 ~~~a~~h~~p~~~~~~~l~~Gdiv~iD~g~---------------------------~~~Gy~aD~tRT~~vG~p~~~~~ 533 (692)
.|++++|+.|++ ++|++||+|++|+|+ .|+||++|+||||++|+|+++++
T Consensus 75 ~n~~~~H~~p~~---~~l~~Gd~v~iD~g~~~~~~~y~~d~~~~~~~~~~~~~~~~~~~~gy~~D~~rT~~vG~~~~~~~ 151 (286)
T PRK07281 75 LNDEVAHAFPRH---YILKEGDLLKVDMVLSEPLDKSIVDVSKLNFDNVEQMKKYTESYRGGLADSCWAYAVGTPSDEVK 151 (286)
T ss_pred ccccccCCCCCC---cCcCCCCEEEEEecccccccccccccccccccccccccccccccCCEEeeeEEEEECCCCCHHHH
Confidence 999999999987 899999999999997 48999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHcCCC-CcCCcccccccCCccccCCCcccc-cCCCCccccCCCE
Q 005523 534 ECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLD-YRHGTGHGVGAALNVHEGPQSISF-RYGNMTPLVEGMI 611 (692)
Q Consensus 534 ~~~~~v~~a~~~~~~~~~P~G~~~~dv~~~a~~~l~~~G~~-~~h~~GHgIG~~l~~hE~P~~i~~-~~~~~~~L~~GMV 611 (692)
++|+++++++.++++++|| |++++||++++++++.+.|+. +.|++||||| +++||.|.+... .++++.+|++|||
T Consensus 152 ~l~~~~~ea~~~ai~~~kp-G~~~~di~~a~~~~~~~~G~~~~~~~~GHGIG--l~~hE~P~i~~~~~~~~~~~Le~GMV 228 (286)
T PRK07281 152 NLMDVTKEAMYRGIEQAVV-GNRIGDIGAAIQEYAESRGYGVVRDLVGHGVG--PTMHEEPMVPNYGTAGRGLRLREGMV 228 (286)
T ss_pred HHHHHHHHHHHHHHHHhcC-CCcHHHHHHHHHHHHHHcCCccCCCeeeeeCC--CccCCCCcCCCcccCCCCCEECCCCE
Confidence 9999999999999999999 999999999999999999984 6799999999 999999973222 2457899999999
Q ss_pred EEEcceeee------------------cCcceEEEEEEEEEecCCCCCCCCCccccCeeEccCCCCcc
Q 005523 612 VSNEPGYYE------------------DHAFGIRIENLLYVKEVGTPNRFGGVSYLGFEKLTFVPIQT 661 (692)
Q Consensus 612 ~siEPgiy~------------------~g~~GiriEd~vlVte~~~~~~~~~~~~~G~E~LT~~P~~~ 661 (692)
|+|||++|. ||.+|+|+||+|+||++ |+|+||..+.++
T Consensus 229 ~tiEPgiy~~~~~~~~~~~~gw~~~~~~g~~gvr~EdtvlVT~~------------G~e~LT~~~~~~ 284 (286)
T PRK07281 229 LTIEPMINTGTWEIDTDMKTGWAHKTLDGGLSCQYEHQFVITKD------------GPVILTSQGEER 284 (286)
T ss_pred EEECCeeEcCCcceecccCCCceEEecCCCcEEEeccEEEEeCC------------cceECCCCCccc
Confidence 999999986 45678999999999999 999999887654
No 12
>PRK12318 methionine aminopeptidase; Provisional
Probab=100.00 E-value=1.5e-43 Score=372.05 Aligned_cols=229 Identities=20% Similarity=0.244 Sum_probs=202.7
Q ss_pred cccccc-cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHhCCCC-------CCCCceee
Q 005523 406 IAFSKA-VKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGFL-------DTSFDTIS 477 (692)
Q Consensus 406 i~~lR~-vKs~~EIe~mR~A~~i~~~a~~~~~~~l~~~i~~~~G~TE~eia~~l~~~~~~~~G~~-------~~~f~~iv 477 (692)
++.++. |||++||+.||+|++++++++.++++.+ ++|+||.||++.+++... ..|.. ..+|++++
T Consensus 36 ~~~~~i~IKs~~EIe~~R~Aa~I~~~a~~a~~~~i------rpG~tE~Eiaa~~~~~~~-~~G~~~~~~~~~~~~f~~~v 108 (291)
T PRK12318 36 ASQYDIIIKTPEQIEKIRKACQVTARILDALCEAA------KEGVTTNELDELSRELHK-EYNAIPAPLNYGSPPFPKTI 108 (291)
T ss_pred cCCCceEECCHHHHHHHHHHHHHHHHHHHHHHHhc------cCCCCHHHHHHHHHHHHH-HcCCCccccccCCCCCCcce
Confidence 455665 9999999999999999999999887776 999999999988776543 34431 34688899
Q ss_pred eeCCCCccccccCCCCCCcccCCCCeEEEecceeECCeEeeeEeEEEcCCCCHHHHHHHHHHHHHHHHHHHccCCCCCCh
Q 005523 478 GSGANGAIIHYKPEPGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFPQSTPG 557 (692)
Q Consensus 478 ~sG~~~a~~h~~p~~~~~~~l~~Gdiv~iD~g~~~~Gy~aD~tRT~~vG~p~~~~~~~~~~v~~a~~~~~~~~~P~G~~~ 557 (692)
++|.|++++|+.|++ ++|++||+|++|+|+.|+||++|++|||++|+|+++++++|++++++++++++++|| |+++
T Consensus 109 ~~g~n~~~~H~~p~~---~~l~~GD~V~vD~g~~~~GY~aDitRT~~vG~~~~~~~~~~~~~~~a~~~~i~~~rp-G~~~ 184 (291)
T PRK12318 109 CTSLNEVICHGIPND---IPLKNGDIMNIDVSCIVDGYYGDCSRMVMIGEVSEIKKKVCQASLECLNAAIAILKP-GIPL 184 (291)
T ss_pred EeeccceeecCCCCC---CccCCCCEEEEEEeEEECcEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHhcC-CCCH
Confidence 999999999999986 899999999999999999999999999999999999999999999999999999999 9999
Q ss_pred HHHHHHHHHHHHHcCCC-CcCCcccccccCCccccCCCcccccCCCCccccCCCEEEEcceeeecCcc------------
Q 005523 558 FVLDAFARSSLWKIGLD-YRHGTGHGVGAALNVHEGPQSISFRYGNMTPLVEGMIVSNEPGYYEDHAF------------ 624 (692)
Q Consensus 558 ~dv~~~a~~~l~~~G~~-~~h~~GHgIG~~l~~hE~P~~i~~~~~~~~~L~~GMV~siEPgiy~~g~~------------ 624 (692)
+||+.++++++++.|+. +.|.+||||| +++||.|.+....++++.+|++||||+|||++|.++.+
T Consensus 185 ~dv~~a~~~~~~~~G~~~~~~~~GHgIG--l~~hE~P~i~~~~~~~~~~L~~GMV~~iEP~i~~~~~~g~~~~~~~~~~~ 262 (291)
T PRK12318 185 YEIGEVIENCADKYGFSVVDQFVGHGVG--IKFHENPYVPHHRNSSKIPLAPGMIFTIEPMINVGKKEGVIDPINHWEAR 262 (291)
T ss_pred HHHHHHHHHHHHHcCCccCCCcccCCcC--ccccCCCcccCcCCCCCCEeCCCCEEEECCEEEcCCCceEEecCCCcEEE
Confidence 99999999999999995 5689999999 99999998544344577899999999999999987433
Q ss_pred ------eEEEEEEEEEecCCCCCCCCCccccCeeEccCCCC
Q 005523 625 ------GIRIENLLYVKEVGTPNRFGGVSYLGFEKLTFVPI 659 (692)
Q Consensus 625 ------GiriEd~vlVte~~~~~~~~~~~~~G~E~LT~~P~ 659 (692)
|+++||||+||++ |+|+||.+|+
T Consensus 263 ~~~g~~~~~~edtv~VTe~------------G~e~LT~~~~ 291 (291)
T PRK12318 263 TCDNQPSAQWEHTILITET------------GYEILTLLDK 291 (291)
T ss_pred ecCCCeeeeeeeEEEEcCC------------cceeCCCCCC
Confidence 3347999999999 9999999883
No 13
>TIGR00500 met_pdase_I methionine aminopeptidase, type I. Methionine aminopeptidase is a cobalt-binding enzyme. Bacterial and organellar examples (type I) differ from eukaroytic and archaeal (type II) examples in lacking a region of approximately 60 amino acids between the 4th and 5th cobalt-binding ligands. This model describes type I. The role of this protein in general is to produce the mature form of cytosolic proteins by removing the N-terminal methionine.
Probab=100.00 E-value=1.3e-42 Score=358.76 Aligned_cols=221 Identities=19% Similarity=0.221 Sum_probs=198.3
Q ss_pred ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHhCCCCC-----CCCceeeeeCCCCcc
Q 005523 411 AVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGFLD-----TSFDTISGSGANGAI 485 (692)
Q Consensus 411 ~vKs~~EIe~mR~A~~i~~~a~~~~~~~l~~~i~~~~G~TE~eia~~l~~~~~~~~G~~~-----~~f~~iv~sG~~~a~ 485 (692)
+|||++||+.||+|++++++++.++++.+ +||+||.|+++.++... ...|... .+|++++++|.|++.
T Consensus 2 ~iKs~~Ei~~~r~A~~i~~~~~~~~~~~i------~~G~tE~el~~~~~~~~-~~~G~~~~~~~~~~~~~~~~~~~n~~~ 74 (247)
T TIGR00500 2 SLKSPDEIEKIRKAGRLAAEVLEELEREV------KPGVSTKELDRIAKDFI-EKHGAKPAFLGYYGFPGSVCISVNEVV 74 (247)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHHHHHhc------cCCCCHHHHHHHHHHHH-HHCCCCccccCCCCCCceeEeccccEE
Confidence 69999999999999999999998887766 99999999999997654 3455432 357788899999999
Q ss_pred ccccCCCCCCcccCCCCeEEEecceeECCeEeeeEeEEEcCCCCHHHHHHHHHHHHHHHHHHHccCCCCCChHHHHHHHH
Q 005523 486 IHYKPEPGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFPQSTPGFVLDAFAR 565 (692)
Q Consensus 486 ~h~~p~~~~~~~l~~Gdiv~iD~g~~~~Gy~aD~tRT~~vG~p~~~~~~~~~~v~~a~~~~~~~~~P~G~~~~dv~~~a~ 565 (692)
+|+.|++ ++|++||+|++|+|+.|+||++|++|||++|+|+++++++|++++++++++++++|| |++++||+.+++
T Consensus 75 ~H~~~~~---~~l~~Gd~v~iD~g~~~~gY~aD~~RT~~vG~~~~~~~~~~~~~~~a~~~~~~~~kp-G~~~~~v~~~~~ 150 (247)
T TIGR00500 75 IHGIPDK---KVLKDGDIVNIDVGVIYDGYHGDTAKTFLVGKISPEAEKLLECTEESLYKAIEEAKP-GNRIGEIGAAIQ 150 (247)
T ss_pred EecCCCC---cccCCCCEEEEEEEEEECCEEEEEEEEEEcCCCCHHHHHHHHHHHHHHHHHHHHhcC-CCCHHHHHHHHH
Confidence 9999986 899999999999999999999999999999999999999999999999999999999 999999999999
Q ss_pred HHHHHcCCC-CcCCcccccccCCccccCCCcccc-cCCCCccccCCCEEEEcceeeec-----------------CcceE
Q 005523 566 SSLWKIGLD-YRHGTGHGVGAALNVHEGPQSISF-RYGNMTPLVEGMIVSNEPGYYED-----------------HAFGI 626 (692)
Q Consensus 566 ~~l~~~G~~-~~h~~GHgIG~~l~~hE~P~~i~~-~~~~~~~L~~GMV~siEPgiy~~-----------------g~~Gi 626 (692)
+.+.+.|+. +.|.+||||| +++||.|.+.+. .++++.+|++||||++||++|.+ +.+|+
T Consensus 151 ~~~~~~g~~~~~~~~GHgiG--~~~~e~p~i~~~~~~~~~~~l~~gmv~~iEp~i~~~~~~~~~~~~~~~~~~~~~~~g~ 228 (247)
T TIGR00500 151 KYAEAKGFSVVREYCGHGIG--RKFHEEPQIPNYGKKFTNVRLKEGMVFTIEPMVNTGTEEITTAADGWTVKTKDGSLSA 228 (247)
T ss_pred HHHHHcCCEeccCccCCccC--cccCCCCccCCcCcCCCCCEecCCCEEEEeeEEEcCCCcEEECCCCCEEEccCCCeEE
Confidence 999999994 6688999999 999999963322 23468999999999999999973 56799
Q ss_pred EEEEEEEEecCCCCCCCCCccccCeeEccC
Q 005523 627 RIENLLYVKEVGTPNRFGGVSYLGFEKLTF 656 (692)
Q Consensus 627 riEd~vlVte~~~~~~~~~~~~~G~E~LT~ 656 (692)
|+||+|+||++ |+|+||.
T Consensus 229 ried~v~Vt~~------------G~e~Lt~ 246 (247)
T TIGR00500 229 QFEHTIVITDN------------GPEILTE 246 (247)
T ss_pred EEeEEEEEcCC------------ccEEccC
Confidence 99999999999 9999984
No 14
>PRK05716 methionine aminopeptidase; Validated
Probab=100.00 E-value=1.8e-42 Score=358.65 Aligned_cols=227 Identities=22% Similarity=0.219 Sum_probs=203.5
Q ss_pred ccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHhCCCC-----CCCCceeeeeCCCC
Q 005523 409 SKAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGFL-----DTSFDTISGSGANG 483 (692)
Q Consensus 409 lR~vKs~~EIe~mR~A~~i~~~a~~~~~~~l~~~i~~~~G~TE~eia~~l~~~~~~~~G~~-----~~~f~~iv~sG~~~ 483 (692)
+-+|||++||+.||+|+++++.++.++++.+ ++|+||.|+++.+.+... ..|.. ..+|++++++|.|+
T Consensus 2 ~~~iKs~~Ei~~~r~A~~i~~~~~~~a~~~i------~pG~se~ela~~~~~~~~-~~G~~~~~~~~~~~~~~~~~g~~~ 74 (252)
T PRK05716 2 AITIKTPEEIEKMRVAGRLAAEVLDEIEPHV------KPGVTTKELDRIAEEYIR-DQGAIPAPLGYHGFPKSICTSVNE 74 (252)
T ss_pred ceeeCCHHHHHHHHHHHHHHHHHHHHHHHHc------cCCCCHHHHHHHHHHHHH-HCCCEecccCCCCCCcCeEecccc
Confidence 3579999999999999999999998887766 999999999999876543 34442 24677788999999
Q ss_pred ccccccCCCCCCcccCCCCeEEEecceeECCeEeeeEeEEEcCCCCHHHHHHHHHHHHHHHHHHHccCCCCCChHHHHHH
Q 005523 484 AIIHYKPEPGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFPQSTPGFVLDAF 563 (692)
Q Consensus 484 a~~h~~p~~~~~~~l~~Gdiv~iD~g~~~~Gy~aD~tRT~~vG~p~~~~~~~~~~v~~a~~~~~~~~~P~G~~~~dv~~~ 563 (692)
..+|+.|++ +.|++||+|++|+|+.|+||++|++||+++|+|+++++++|+++++++.++++++|| |++++||+++
T Consensus 75 ~~~h~~~~~---~~l~~Gd~v~id~g~~~~gY~~d~~RT~~vG~~~~~~~~~~~~~~~~~~~~~~~~~p-G~~~~dv~~~ 150 (252)
T PRK05716 75 VVCHGIPSD---KVLKEGDIVNIDVTVIKDGYHGDTSRTFGVGEISPEDKRLCEVTKEALYLGIAAVKP-GARLGDIGHA 150 (252)
T ss_pred eeecCCCCC---cccCCCCEEEEEEEEEECCEEEEeEEEEECCCCCHHHHHHHHHHHHHHHHHHHHhcC-CCCHHHHHHH
Confidence 999999876 899999999999999999999999999999999999999999999999999999999 9999999999
Q ss_pred HHHHHHHcCCC-CcCCcccccccCCccccCCCcccc-cCCCCccccCCCEEEEcceeee-----------------cCcc
Q 005523 564 ARSSLWKIGLD-YRHGTGHGVGAALNVHEGPQSISF-RYGNMTPLVEGMIVSNEPGYYE-----------------DHAF 624 (692)
Q Consensus 564 a~~~l~~~G~~-~~h~~GHgIG~~l~~hE~P~~i~~-~~~~~~~L~~GMV~siEPgiy~-----------------~g~~ 624 (692)
+++.+++.|+. ..|.+||||| +.+||.|.++.+ .++++.+|++||||++||++|. +|.+
T Consensus 151 ~~~~~~~~g~~~~~~~~GHgiG--~~~~e~p~~~~~~~~~~~~~le~Gmv~~vEp~i~~~~~~~~~~~~~~~~~~~~g~~ 228 (252)
T PRK05716 151 IQKYAEAEGFSVVREYCGHGIG--RKFHEEPQIPHYGAPGDGPVLKEGMVFTIEPMINAGKREVKTLKDGWTVVTKDGSL 228 (252)
T ss_pred HHHHHHHcCCeeecCccccccC--CccCCCCccCcCCCCCCCCEecCCCEEEEccEEEcCCCceEEcCCCCEEEccCCCc
Confidence 99999999995 5688999999 999999974332 3457899999999999999997 5778
Q ss_pred eEEEEEEEEEecCCCCCCCCCccccCeeEccCCCCc
Q 005523 625 GIRIENLLYVKEVGTPNRFGGVSYLGFEKLTFVPIQ 660 (692)
Q Consensus 625 GiriEd~vlVte~~~~~~~~~~~~~G~E~LT~~P~~ 660 (692)
|+|+||+|+||++ |+|+||..|.+
T Consensus 229 g~~~ed~v~Vt~~------------G~e~Lt~~~~~ 252 (252)
T PRK05716 229 SAQYEHTVAVTED------------GPEILTLRPEE 252 (252)
T ss_pred EEeeeeEEEEcCC------------ccEEeeCCCCC
Confidence 9999999999999 99999998853
No 15
>cd01085 APP X-Prolyl Aminopeptidase 2. E.C. 3.4.11.9. Also known as X-Pro aminopeptidase, proline aminopeptidase, aminopeptidase P, and aminoacylproline aminopeptidase. Catalyses release of any N-terminal amino acid, including proline, that is linked with proline, even from a dipeptide or tripeptide.
Probab=100.00 E-value=6.8e-42 Score=347.00 Aligned_cols=216 Identities=58% Similarity=0.945 Sum_probs=192.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCC--CCHHHHHHHHHHHHHHhCCCCCCCCceeeeeCCCCccccccCCCCCCccc
Q 005523 421 MLNSHLRDAAALAQFWVWLEEEIHNGAK--LTEVDVADKLLEFRSKQSGFLDTSFDTISGSGANGAIIHYKPEPGKCSVV 498 (692)
Q Consensus 421 mR~A~~i~~~a~~~~~~~l~~~i~~~~G--~TE~eia~~l~~~~~~~~G~~~~~f~~iv~sG~~~a~~h~~p~~~~~~~l 498 (692)
||.|+..+..++..+++++.+.+ ++| +||.||++.+++++....++.+.+|+++|++|+|++.+|+.|+..++++|
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~i--~~G~~~tE~eiaa~~~~~~~~~g~~~~~~f~~~v~~g~n~~~~H~~p~~~~~r~l 79 (224)
T cd01085 2 MRAAHIRDGVALVEFLAWLEQEV--PKGETITELSAADKLEEFRRQQKGYVGLSFDTISGFGPNGAIVHYSPTEESNRKI 79 (224)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHh--ccCCCEeHHHHHHHHHHHHHHcCCCcCCCcceEEEecCccCcCCCCcCcccCccc
Confidence 67787777777777888888888 999 99999999999765444445567899999999999999999983234899
Q ss_pred CCCCeEEEecceeECCeEeeeEeEEEcCCCCHHHHHHHHHHHHHHHHHHHccC-CCCCChHHHHHHHHHHHHHcCCCCcC
Q 005523 499 DSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIF-PQSTPGFVLDAFARSSLWKIGLDYRH 577 (692)
Q Consensus 499 ~~Gdiv~iD~g~~~~Gy~aD~tRT~~vG~p~~~~~~~~~~v~~a~~~~~~~~~-P~G~~~~dv~~~a~~~l~~~G~~~~h 577 (692)
++||+|++|+|+.|+||++|++|||++|+|+++|+++|+.+++++.++++.++ | |+++.+|++++++.+.+.|++|.|
T Consensus 80 ~~GD~V~iD~g~~~~gY~aD~~RT~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~-G~~~~~v~~~~~~~~~~~g~~~~h 158 (224)
T cd01085 80 SPDGLYLIDSGGQYLDGTTDITRTVHLGEPTAEQKRDYTLVLKGHIALARAKFPK-GTTGSQLDALARQPLWKAGLDYGH 158 (224)
T ss_pred CCCCEEEEEeCccCCCcccccEEeecCCCCCHHHHHHHHHHHHHHHHHHHHhcCC-CCCHHHHHHHHHHHHHHhCCCCCC
Confidence 99999999999999999999999999999999999999999999999998885 6 999999999999999999999999
Q ss_pred CcccccccCCccccCCCcccccCCCCccccCCCEEEEcceeeecCcceEEEEEEEEEecCCCC
Q 005523 578 GTGHGVGAALNVHEGPQSISFRYGNMTPLVEGMIVSNEPGYYEDHAFGIRIENLLYVKEVGTP 640 (692)
Q Consensus 578 ~~GHgIG~~l~~hE~P~~i~~~~~~~~~L~~GMV~siEPgiy~~g~~GiriEd~vlVte~~~~ 640 (692)
++|||||.++++||.|.++ ..++++.+|++||||+|||++|.+|.+|+|+||+|+||++|+.
T Consensus 159 ~~GHgIG~~l~~hE~P~i~-~~~~~~~~L~~GmvftiEP~iy~~g~~gvried~v~Vt~~G~~ 220 (224)
T cd01085 159 GTGHGVGSFLNVHEGPQSI-SPAPNNVPLKAGMILSNEPGYYKEGKYGIRIENLVLVVEAETT 220 (224)
T ss_pred CCCCCCCCCCcCCCCCCcC-CcCCCCCCcCCCCEEEECCEeEeCCCeEEEeeEEEEEeeCCcC
Confidence 9999999555889999844 1245789999999999999999999999999999999999653
No 16
>PRK12896 methionine aminopeptidase; Reviewed
Probab=100.00 E-value=1.5e-41 Score=352.49 Aligned_cols=224 Identities=22% Similarity=0.160 Sum_probs=200.6
Q ss_pred cccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHhCCCC-----CCCCceeeeeCCC
Q 005523 408 FSKAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGFL-----DTSFDTISGSGAN 482 (692)
Q Consensus 408 ~lR~vKs~~EIe~mR~A~~i~~~a~~~~~~~l~~~i~~~~G~TE~eia~~l~~~~~~~~G~~-----~~~f~~iv~sG~~ 482 (692)
++++|||++||+.||+|+++++.++.++++.+ +||+||.|+++.+.+... ..|.. ...|++++++|.|
T Consensus 6 ~~~~vKs~~Ei~~~r~a~~i~~~~~~~~~~~i------~pG~te~el~~~~~~~~~-~~G~~~~~~~~~~~~~~~~~~~n 78 (255)
T PRK12896 6 RGMEIKSPRELEKMRKIGRIVATALKEMGKAV------EPGMTTKELDRIAEKRLE-EHGAIPSPEGYYGFPGSTCISVN 78 (255)
T ss_pred CceeECCHHHHHHHHHHHHHHHHHHHHHHhhc------cCCCCHHHHHHHHHHHHH-HCCCEeCcccCCCCCcceEecCC
Confidence 35689999999999999999999999887766 999999999999886543 44543 2357778889999
Q ss_pred CccccccCCCCCCcccCCCCeEEEecceeECCeEeeeEeEEEcCCCCHHHHHHHHHHHHHHHHHHHccCCCCCChHHHHH
Q 005523 483 GAIIHYKPEPGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFPQSTPGFVLDA 562 (692)
Q Consensus 483 ~a~~h~~p~~~~~~~l~~Gdiv~iD~g~~~~Gy~aD~tRT~~vG~p~~~~~~~~~~v~~a~~~~~~~~~P~G~~~~dv~~ 562 (692)
...+|+.|++ ++|++||+|++|+|+.|+||++|++|||++|+|+++++++|+++++++.++++++|| |+++++|++
T Consensus 79 ~~~~h~~p~~---~~l~~Gd~v~iD~g~~~~gY~aD~~RT~~vG~~~~~~~~~~~~~~~a~~~~~~~~kp-G~~~~~v~~ 154 (255)
T PRK12896 79 EEVAHGIPGP---RVIKDGDLVNIDVSAYLDGYHGDTGITFAVGPVSEEAEKLCRVAEEALWAGIKQVKA-GRPLNDIGR 154 (255)
T ss_pred CeeEecCCCC---ccCCCCCEEEEEEeEEECcEEEeeEEEEECCCCCHHHHHHHHHHHHHHHHHHHHhcC-CCCHHHHHH
Confidence 9999999976 899999999999999999999999999999999999999999999999999999999 999999999
Q ss_pred HHHHHHHHcCCC-CcCCcccccccCCccccCCCcccc--cCCCCccccCCCEEEEcceee-----------------ecC
Q 005523 563 FARSSLWKIGLD-YRHGTGHGVGAALNVHEGPQSISF--RYGNMTPLVEGMIVSNEPGYY-----------------EDH 622 (692)
Q Consensus 563 ~a~~~l~~~G~~-~~h~~GHgIG~~l~~hE~P~~i~~--~~~~~~~L~~GMV~siEPgiy-----------------~~g 622 (692)
++++++.+.|+. +.|.+||||| +.+||.|..+.. .++++.+|++||||+|||++| .++
T Consensus 155 ~~~~~~~~~G~~~~~~~~GHgiG--~~~he~p~~~~~~~~~~~~~~le~GmV~~iEp~i~~g~~~~~~~~~~~~~~~~~~ 232 (255)
T PRK12896 155 AIEDFAKKNGYSVVRDLTGHGVG--RSLHEEPSVILTYTDPLPNRLLRPGMTLAVEPFLNLGAKDAETLDDGWTVVTPDK 232 (255)
T ss_pred HHHHHHHHcCCEeccCcccCCcC--cccccCCCccccCCCCCCCCEecCCcEEEEeceEEcCCCceEEcCCCCEEEecCC
Confidence 999999999994 6789999999 999999964532 245789999999999999998 367
Q ss_pred cceEEEEEEEEEecCCCCCCCCCccccCeeEccC
Q 005523 623 AFGIRIENLLYVKEVGTPNRFGGVSYLGFEKLTF 656 (692)
Q Consensus 623 ~~GiriEd~vlVte~~~~~~~~~~~~~G~E~LT~ 656 (692)
.+|+|+||||+||++ |+|+||.
T Consensus 233 ~~~~~~edtv~vt~~------------G~e~Lt~ 254 (255)
T PRK12896 233 SLSAQFEHTVVVTRD------------GPEILTD 254 (255)
T ss_pred CeEEEEEEEEEEcCC------------cceecCC
Confidence 889999999999999 9999994
No 17
>cd01090 Creatinase Creatine amidinohydrolase. E.C.3.5.3.3. Hydrolyzes creatine to sarcosine and urea.
Probab=100.00 E-value=1.4e-41 Score=346.23 Aligned_cols=214 Identities=20% Similarity=0.068 Sum_probs=189.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHhCCCCCCCC------ceeeeeCCCCccccccCC
Q 005523 418 LEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGFLDTSF------DTISGSGANGAIIHYKPE 491 (692)
Q Consensus 418 Ie~mR~A~~i~~~a~~~~~~~l~~~i~~~~G~TE~eia~~l~~~~~~~~G~~~~~f------~~iv~sG~~~a~~h~~p~ 491 (692)
|+.||+|+++++.++.++++.+ +||+||.||++.+.+... ..|....++ .+++++|+|++.+|+.|+
T Consensus 1 I~~ir~Aa~i~d~~~~~~~~~i------~pG~tE~ei~a~~~~~~~-~~ga~~~~~~~~~~~~~~v~~G~~~~~~H~~~~ 73 (228)
T cd01090 1 IALIRHGARIADIGGAAVVEAI------REGVPEYEVALAGTQAMV-REIAKTFPEVELMDTWTWFQSGINTDGAHNPVT 73 (228)
T ss_pred CHHHHHHHHHHHHHHHHHHHHh------cCCCCHHHHHHHHHHHHH-HcCCccCCcccccCcceEEEeeccccccCCCCC
Confidence 6889999999999999888777 999999999999876543 344332222 368899999999999987
Q ss_pred CCCCcccCCCCeEEEecceeECCeEeeeEeEEEcCCCCHHHHHHHHHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHc
Q 005523 492 PGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKI 571 (692)
Q Consensus 492 ~~~~~~l~~Gdiv~iD~g~~~~Gy~aD~tRT~~vG~p~~~~~~~~~~v~~a~~~~~~~~~P~G~~~~dv~~~a~~~l~~~ 571 (692)
+ ++|++||+|++|+|+.|+||++|++|||++|+|+++|+++|+++.++++++++++|| |++++||++++++.+++.
T Consensus 74 ~---r~l~~GD~v~~d~g~~~~GY~ad~~RT~~vG~~~~~~~~~~~~~~ea~~~~~~~~rp-G~~~~~v~~a~~~~~~~~ 149 (228)
T cd01090 74 N---RKVQRGDILSLNCFPMIAGYYTALERTLFLDEVSDAHLKIWEANVAVHERGLELIKP-GARCKDIAAELNEMYREH 149 (228)
T ss_pred C---cccCCCCEEEEEEeEEECCEeeeeEEEEECCCCCHHHHHHHHHHHHHHHHHHHHcCC-CCcHHHHHHHHHHHHHHc
Confidence 6 899999999999999999999999999999999999999999999999999999999 999999999999999999
Q ss_pred CC--CCcCCcccccccCCccccCCCcc--cccCCCCccccCCCEEEEcceeeec----CcceEEEEEEEEEecCCCCCCC
Q 005523 572 GL--DYRHGTGHGVGAALNVHEGPQSI--SFRYGNMTPLVEGMIVSNEPGYYED----HAFGIRIENLLYVKEVGTPNRF 643 (692)
Q Consensus 572 G~--~~~h~~GHgIG~~l~~hE~P~~i--~~~~~~~~~L~~GMV~siEPgiy~~----g~~GiriEd~vlVte~~~~~~~ 643 (692)
|+ .+.|++||||| +.+||.|... ....+++.+|++||||++||++|.+ |.+|+|+||+|+||++
T Consensus 150 G~~~~~~~~~GHgiG--l~~he~~~~~g~~~~~~~~~~Le~GMV~~iEP~i~~~~~~~g~gG~ried~v~Vt~~------ 221 (228)
T cd01090 150 DLLRYRTFGYGHSFG--VLSHYYGREAGLELREDIDTVLEPGMVVSMEPMIMLPEGQPGAGGYREHDILVINEN------ 221 (228)
T ss_pred CCCcccccccCcccc--cccccCCCccccccCCCCCCccCCCCEEEECCEEeecccCCCCcEEEeeeEEEECCC------
Confidence 98 46899999999 9999987421 2223577999999999999999984 7899999999999999
Q ss_pred CCccccCeeEccC
Q 005523 644 GGVSYLGFEKLTF 656 (692)
Q Consensus 644 ~~~~~~G~E~LT~ 656 (692)
|+|+||.
T Consensus 222 ------G~e~Lt~ 228 (228)
T cd01090 222 ------GAENITG 228 (228)
T ss_pred ------ccccCcC
Confidence 9999983
No 18
>PLN03158 methionine aminopeptidase; Provisional
Probab=100.00 E-value=2.3e-41 Score=366.41 Aligned_cols=236 Identities=17% Similarity=0.187 Sum_probs=206.8
Q ss_pred ccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHhCCCC----CCCCceeeeeC
Q 005523 405 PIAFSKAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGFL----DTSFDTISGSG 480 (692)
Q Consensus 405 ~i~~lR~vKs~~EIe~mR~A~~i~~~a~~~~~~~l~~~i~~~~G~TE~eia~~l~~~~~~~~G~~----~~~f~~iv~sG 480 (692)
.++..|.|||++||+.||+|++++..++..+.+.+ ++|+||.||++.+++...+.++.. ...|+.++++|
T Consensus 130 ~~~~~~~IKsp~EIe~mR~A~~ia~~al~~a~~~i------rpGvTe~EI~~~v~~~~~~~Ga~ps~l~y~~fp~svcts 203 (396)
T PLN03158 130 DLQHSVEIKTPEQIQRMRETCRIAREVLDAAARAI------KPGVTTDEIDRVVHEATIAAGGYPSPLNYHFFPKSCCTS 203 (396)
T ss_pred ccccceeeCCHHHHHHHHHHHHHHHHHHHHHHHHc------cCCCCHHHHHHHHHHHHHHcCCccccccccCCCceeeec
Confidence 35678999999999999999999999999888776 999999999999987654433321 13588889999
Q ss_pred CCCccccccCCCCCCcccCCCCeEEEecceeECCeEeeeEeEEEcCCCCHHHHHHHHHHHHHHHHHHHccCCCCCChHHH
Q 005523 481 ANGAIIHYKPEPGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFPQSTPGFVL 560 (692)
Q Consensus 481 ~~~a~~h~~p~~~~~~~l~~Gdiv~iD~g~~~~Gy~aD~tRT~~vG~p~~~~~~~~~~v~~a~~~~~~~~~P~G~~~~dv 560 (692)
.|..++|+.|++ ++|++||+|.+|+|+.|+||++|++|||++|+++++++++|+++.++++++++++|| |++++||
T Consensus 204 ~N~~i~Hgip~~---r~L~~GDiV~iDvg~~~~GY~aD~tRT~~VG~~~~e~~~l~e~~~eal~~aI~~vkP-Gv~~~dI 279 (396)
T PLN03158 204 VNEVICHGIPDA---RKLEDGDIVNVDVTVYYKGCHGDLNETFFVGNVDEASRQLVKCTYECLEKAIAIVKP-GVRYREV 279 (396)
T ss_pred ccccccCCCCCC---ccCCCCCEEEEEEeEEECCEEEeEEeEEEcCCCCHHHHHHHHHHHHHHHHHHHHcCC-CCCHHHH
Confidence 999999999976 899999999999999999999999999999999999999999999999999999999 9999999
Q ss_pred HHHHHHHHHHcCCC-CcCCcccccccCCccccCCCccccc-CCCCccccCCCEEEEcceeee-----------------c
Q 005523 561 DAFARSSLWKIGLD-YRHGTGHGVGAALNVHEGPQSISFR-YGNMTPLVEGMIVSNEPGYYE-----------------D 621 (692)
Q Consensus 561 ~~~a~~~l~~~G~~-~~h~~GHgIG~~l~~hE~P~~i~~~-~~~~~~L~~GMV~siEPgiy~-----------------~ 621 (692)
++++++++.+.|+. +.|.+||||| +.+||.|.+..+. .....+|++||||+|||++|. +
T Consensus 280 ~~~i~~~~~~~G~~~v~~~~GHGIG--~~~He~P~i~~~~~~~~~~~l~~GMVfTIEP~i~~g~~~~~~~~d~wt~~t~d 357 (396)
T PLN03158 280 GEVINRHATMSGLSVVKSYCGHGIG--ELFHCAPNIPHYARNKAVGVMKAGQVFTIEPMINAGVWRDRMWPDGWTAVTAD 357 (396)
T ss_pred HHHHHHHHHHcCCCccCCccCCccc--cccCCCCCCCcccCCCCCCEecCCcEEEECCeeccCcccceecCCCceEEecC
Confidence 99999999999995 6788999999 9999999843221 113479999999999999985 3
Q ss_pred CcceEEEEEEEEEecCCCCCCCCCccccCeeEccC-CCCcccch
Q 005523 622 HAFGIRIENLLYVKEVGTPNRFGGVSYLGFEKLTF-VPIQTKLV 664 (692)
Q Consensus 622 g~~GiriEd~vlVte~~~~~~~~~~~~~G~E~LT~-~P~~~~li 664 (692)
|.+|+++||||+||++ |+|+||. .|....++
T Consensus 358 G~~~aq~E~tvlVTe~------------G~EiLT~~~~~~~~~~ 389 (396)
T PLN03158 358 GKRSAQFEHTLLVTET------------GVEVLTARLPSSPDVF 389 (396)
T ss_pred CceeeEeeeEEEEeCC------------cceECCCCCCCCcccc
Confidence 5557899999999999 9999996 77666544
No 19
>cd01087 Prolidase Prolidase. E.C. 3.4.13.9. Also known as Xaa-Pro dipeptidase, X-Pro dipeptidase, proline dipeptidase., imidodipeptidase, peptidase D, gamma-peptidase. Catalyses hydrolysis of Xaa-Pro dipeptides; also acts on aminoacyl-hydroxyproline analogs. No action on Pro-Pro.
Probab=100.00 E-value=3.5e-41 Score=347.15 Aligned_cols=212 Identities=29% Similarity=0.315 Sum_probs=191.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHhCCCCCCCCceeeeeCCCCccccccCCCCCCcc
Q 005523 418 LEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGFLDTSFDTISGSGANGAIIHYKPEPGKCSV 497 (692)
Q Consensus 418 Ie~mR~A~~i~~~a~~~~~~~l~~~i~~~~G~TE~eia~~l~~~~~~~~G~~~~~f~~iv~sG~~~a~~h~~p~~~~~~~ 497 (692)
|+.||+|++++++++.++.+.+ +||+||.||++.+++... ..|.. .+|++++++|+|++.+|+.|++ ++
T Consensus 1 i~~lr~A~~i~~~~~~~~~~~i------~pG~tE~ei~~~~~~~~~-~~G~~-~~~~~~v~~g~~~~~~H~~~~~---~~ 69 (243)
T cd01087 1 IELMRKACDISAEAHRAAMKAS------RPGMSEYELEAEFEYEFR-SRGAR-LAYSYIVAAGSNAAILHYVHND---QP 69 (243)
T ss_pred CHHHHHHHHHHHHHHHHHHHHC------cCCCcHHHHHHHHHHHHH-HcCCC-cCCCCeEEECCCccccCCCcCC---Cc
Confidence 6899999999999999887766 999999999999987644 45654 6788999999999999999986 89
Q ss_pred cCCCCeEEEecceeECCeEeeeEeEEEc-CCCCHHHHHHHHHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHcCC---
Q 005523 498 VDSKKLFLLDSGAQYVDGTTDITRTVHF-GEPTAREKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGL--- 573 (692)
Q Consensus 498 l~~Gdiv~iD~g~~~~Gy~aD~tRT~~v-G~p~~~~~~~~~~v~~a~~~~~~~~~P~G~~~~dv~~~a~~~l~~~G~--- 573 (692)
|++||+|++|+|+.|+||++|++|||++ |+|+++++++|+++++++.++++++|| |++++||++++++.+++.|+
T Consensus 70 l~~Gd~v~vD~g~~~~GY~ad~~Rt~~vgg~~~~~~~~~~~~~~~a~~~~i~~~rp-G~~~~~v~~a~~~~~~~~~~~~g 148 (243)
T cd01087 70 LKDGDLVLIDAGAEYGGYASDITRTFPVNGKFTDEQRELYEAVLAAQKAAIAACKP-GVSYEDIHLLAHRVLAEGLKELG 148 (243)
T ss_pred CCCCCEEEEEeCceECCEeeeeeEEEEeCCcCCHHHHHHHHHHHHHHHHHHHHhCC-CCcHHHHHHHHHHHHHHHHHhcC
Confidence 9999999999999999999999999999 689999999999999999999999999 99999999999999876531
Q ss_pred -----------------CCcCCcccccccCCccccCCCcccccCCCCccccCCCEEEEcceeeecC----------cceE
Q 005523 574 -----------------DYRHGTGHGVGAALNVHEGPQSISFRYGNMTPLVEGMIVSNEPGYYEDH----------AFGI 626 (692)
Q Consensus 574 -----------------~~~h~~GHgIG~~l~~hE~P~~i~~~~~~~~~L~~GMV~siEPgiy~~g----------~~Gi 626 (692)
++.|++||||| +++||.|. +...++++.+|++||||++||++|.++ .+|+
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~h~~GhgiG--l~~~e~p~-~~~~~~~~~~l~~GMv~~iEp~iy~~~~~~~~~~~~~~~g~ 225 (243)
T cd01087 149 ILKGDVDEIVESGAYAKFFPHGLGHYLG--LDVHDVGG-YLRYLRRARPLEPGMVITIEPGIYFIPDLLDVPEYFRGGGI 225 (243)
T ss_pred cccCchHhhhhhhhhhhhcCCCCccccC--cccccCcc-ccccCCCCCCCCCCCEEEECCEEEeCCcccccccccceeEE
Confidence 46899999999 99999997 311345889999999999999999987 7899
Q ss_pred EEEEEEEEecCCCCCCCCCccccCeeEccC
Q 005523 627 RIENLLYVKEVGTPNRFGGVSYLGFEKLTF 656 (692)
Q Consensus 627 riEd~vlVte~~~~~~~~~~~~~G~E~LT~ 656 (692)
|+||+|+||++ |+|.||.
T Consensus 226 ~ied~v~Vt~~------------G~e~Lt~ 243 (243)
T cd01087 226 RIEDDVLVTED------------GPENLTR 243 (243)
T ss_pred EeeeEEEEcCC------------cceeCcC
Confidence 99999999999 9999984
No 20
>KOG2414 consensus Putative Xaa-Pro aminopeptidase [Amino acid transport and metabolism]
Probab=100.00 E-value=7.5e-41 Score=345.13 Aligned_cols=375 Identities=22% Similarity=0.293 Sum_probs=272.7
Q ss_pred CCCCCCCcccccccc----ccchhHHHHHHHHHHHHHHcCCCEEEEccc----------------chhhhhcCCCCCCCC
Q 005523 232 RPKPPNKPIRVHALK----YAGLDVASKLSSLRSDLVDAGSSAIVISML----------------DEIAWLLNLRGSDVP 291 (692)
Q Consensus 232 rp~~~~~~~~~~~~~----fs~~e~~~Rl~rlr~~m~e~glDallis~~----------------~ni~YLtGf~g~~~~ 291 (692)
+|.+.+.|-...|-+ .+..||..|+.||.+.|.++. .+|+++. .|+.||||+.-.+
T Consensus 43 Qpt~~thPhli~pgEltPgis~~Ey~~RR~rl~~ll~~~a--~~il~sap~~~msg~ipY~f~Qd~df~YLtGc~EP~-- 118 (488)
T KOG2414|consen 43 QPTSVTHPHLIQPGELTPGISATEYKERRSRLMSLLPANA--MVILGSAPVKYMSGAIPYTFRQDNDFYYLTGCLEPD-- 118 (488)
T ss_pred CCCCCCCccccCCCCcCCCccHHHHHHHHHHHHHhCCccc--EEEEccCchhhhcCccceeeecCCCeEEEeccCCCC--
Confidence 455555555544433 567899999999999999875 3444332 4677888876544
Q ss_pred CCcceeeEEEEe--CC---ceEEEEeCCCCCHHHHhhhhcCCe----------EEEecccHHHHHHHHHhcCCeEEEeCC
Q 005523 292 HSPVMYAYLIVE--MD---RAKLFVDDSKVTPDVMDHLKNAGV----------ELRPYNSILSEIKSLAAQGAQLWLDPS 356 (692)
Q Consensus 292 ~~Pv~~a~llvt--~~---~~~L~vd~~~~~~~~~~~l~~~~v----------~i~~y~~~~~~l~~l~~~~~~Igvd~~ 356 (692)
+.+++. +. ...+|++...-..+.++-.. .+. +-.+-+++...|.+.....-+++.+..
T Consensus 119 ------~vl~l~~~d~~s~~~~lf~p~kdP~~e~WeG~r-tG~~~a~~if~v~ea~~~s~l~~~L~k~~~~~~~i~~d~~ 191 (488)
T KOG2414|consen 119 ------AVLLLLKGDERSVAYDLFMPPKDPTAELWEGPR-TGTDGASEIFGVDEAYPLSGLAVFLPKMSALLYKIWQDKA 191 (488)
T ss_pred ------eeEEEeecccccceeeEecCCCCccHHhhcCcc-ccchhhhhhhcchhhcchhhHHHHHHHHHhhhhhhhhhhc
Confidence 555553 22 24566653322222222211 111 111112333334333322345666654
Q ss_pred CCcH-HHHHHHHHHHHHhhhhccccccccccccCCCCCCCCCcceecCCccccccccCCHHHHHHHHHHHHHHHHHHHHH
Q 005523 357 SVNA-AIMNTYEIAIEKYLTSNNNKKSKTKMHTDTTGQSGGPAGVFRTSPIAFSKAVKNSAELEGMLNSHLRDAAALAQF 435 (692)
Q Consensus 357 ~~s~-~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~i~~lR~vKs~~EIe~mR~A~~i~~~a~~~~ 435 (692)
.... ..++.++.... .++-.-++..+..++.++|.||||+|++.||+|+.++.+++...
T Consensus 192 ss~a~s~~~~~~dl~~--------------------~~~~~~~~~~~~~li~~lRlIKSpaEl~~Mr~a~~I~sq~~~~~ 251 (488)
T KOG2414|consen 192 SSKASSALKNMQDLLG--------------------FQSKSSTVRPVSNLIERLRLIKSPAELELMREACNIASQTFSET 251 (488)
T ss_pred cchhhhHHHHHHhhhh--------------------hcccCcccccHHHHHHHHHccCCHHHHHHHHHHhhhhhHHHHHH
Confidence 3221 11222222110 11112246778899999999999999999999999999876544
Q ss_pred HHHHHHHhhcCCCCCHHHHHHHHHHHHHHhCCCCCCCCceeeeeCCCCccccccCCCCCCcccCCCCeEEEecceeECCe
Q 005523 436 WVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGFLDTSFDTISGSGANGAIIHYKPEPGKCSVVDSKKLFLLDSGAQYVDG 515 (692)
Q Consensus 436 ~~~l~~~i~~~~G~TE~eia~~l~~~~~~~~G~~~~~f~~iv~sG~~~a~~h~~p~~~~~~~l~~Gdiv~iD~g~~~~Gy 515 (692)
+- .+++...|..+.+.++.. ...+|+...+|+|+|+.|.|+..+||..++ ..++++|+|++|.||.+.||
T Consensus 252 m~------~sr~~~~E~~l~a~~eye-~r~rGad~~AYpPVVAgG~na~tIHY~~Nn---q~l~d~emVLvDaGcelgGY 321 (488)
T KOG2414|consen 252 MF------GSRDFHNEAALSALLEYE-CRRRGADRLAYPPVVAGGKNANTIHYVRNN---QLLKDDEMVLVDAGCELGGY 321 (488)
T ss_pred Hh------hccCCcchhhHhhhhhhh-eeecCccccccCCeeecCcccceEEEeecc---cccCCCcEEEEecCcccCce
Confidence 32 347899999999999843 245788889999999999999999999876 88999999999999999999
Q ss_pred EeeeEeEEEc-CCCCHHHHHHHHHHHHHHHHHHHccCC-CCCChHHHHHHHHH----HHHHcCC-------------CCc
Q 005523 516 TTDITRTVHF-GEPTAREKECFTRVLQGHIALDQAIFP-QSTPGFVLDAFARS----SLWKIGL-------------DYR 576 (692)
Q Consensus 516 ~aD~tRT~~v-G~p~~~~~~~~~~v~~a~~~~~~~~~P-~G~~~~dv~~~a~~----~l~~~G~-------------~~~ 576 (692)
++|+||||.+ |..++.|+++|++++..++.+++.++| .|++..+|+..... .+++.|. .++
T Consensus 322 vSDITRTWP~sGkFs~~Qr~LYeavL~vq~ecik~c~~~~g~sL~~l~~~s~~Ll~~~Lk~lGI~kt~~ee~~~~~klcP 401 (488)
T KOG2414|consen 322 VSDITRTWPISGKFSDAQRDLYEAVLQVQEECIKYCKPSNGTSLSQLFERSNELLGQELKELGIRKTDREEMIQAEKLCP 401 (488)
T ss_pred EccceeccCCCCccCcHHHHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHHhCcccchHHHHHhhhhcCC
Confidence 9999999999 899999999999999999999999987 68999999886654 4455565 268
Q ss_pred CCcccccccCCccccCCCcccccCCCCccccCCCEEEEcceeeecCc---------ceEEEEEEEEEecCCCCCCCCCcc
Q 005523 577 HGTGHGVGAALNVHEGPQSISFRYGNMTPLVEGMIVSNEPGYYEDHA---------FGIRIENLLYVKEVGTPNRFGGVS 647 (692)
Q Consensus 577 h~~GHgIG~~l~~hE~P~~i~~~~~~~~~L~~GMV~siEPgiy~~g~---------~GiriEd~vlVte~~~~~~~~~~~ 647 (692)
|++||-+| +++|+-|. ++ .+.+|+|||||+||||+|+|.. -|+||||.|+|+++
T Consensus 402 HhVgHyLG--mDVHD~p~-v~----r~~pL~pg~ViTIEPGvYIP~d~d~P~~FrGIGiRIEDDV~i~ed---------- 464 (488)
T KOG2414|consen 402 HHVGHYLG--MDVHDCPT-VS----RDIPLQPGMVITIEPGVYIPEDDDPPEEFRGIGIRIEDDVAIGED---------- 464 (488)
T ss_pred cccchhcC--cccccCCC-CC----CCccCCCCceEEecCceecCccCCCchHhcCceEEeecceEeccC----------
Confidence 99999999 99999997 43 5799999999999999999743 39999999999999
Q ss_pred ccCeeEccC-CCCcccchhh
Q 005523 648 YLGFEKLTF-VPIQTKLVDL 666 (692)
Q Consensus 648 ~~G~E~LT~-~P~~~~li~~ 666 (692)
|.|+||. +|++.+.|..
T Consensus 465 --g~evLT~a~pKei~~ie~ 482 (488)
T KOG2414|consen 465 --GPEVLTAACPKEIIEIER 482 (488)
T ss_pred --CceeehhcccCCHHHHHH
Confidence 8899995 9988777763
No 21
>KOG2737 consensus Putative metallopeptidase [General function prediction only]
Probab=100.00 E-value=2.6e-39 Score=330.10 Aligned_cols=241 Identities=28% Similarity=0.381 Sum_probs=209.7
Q ss_pred CccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHhCCCCCCCCceeeeeCCCC
Q 005523 404 SPIAFSKAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGFLDTSFDTISGSGANG 483 (692)
Q Consensus 404 ~~i~~lR~vKs~~EIe~mR~A~~i~~~a~~~~~~~l~~~i~~~~G~TE~eia~~l~~~~~~~~G~~~~~f~~iv~sG~~~ 483 (692)
+.+.+.|.|||+.||+.||.|+++++.|+.++++.+ +||+.|+++...++...-..+|....+|.+|++||+|+
T Consensus 177 p~m~E~RviKs~~EieviRya~kISseaH~~vM~~~------~pg~~Eyq~eslF~hh~y~~GGcRh~sYtcIc~sG~ns 250 (492)
T KOG2737|consen 177 PILAECRVIKSSLEIEVIRYANKISSEAHIEVMRAV------RPGMKEYQLESLFLHHSYSYGGCRHLSYTCICASGDNS 250 (492)
T ss_pred HHHhhheeeCCHHHHHHHHHHHhhccHHHHHHHHhC------CchHhHHhHHHHHHHhhhccCCccccccceeeecCCCc
Confidence 456789999999999999999999999999999988 99999999999887543345677889999999999999
Q ss_pred ccccc----cCCCCCCcccCCCCeEEEecceeECCeEeeeEeEEEc-CCCCHHHHHHHHHHHHHHHHHHHccCCCCCChH
Q 005523 484 AIIHY----KPEPGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHF-GEPTAREKECFTRVLQGHIALDQAIFPQSTPGF 558 (692)
Q Consensus 484 a~~h~----~p~~~~~~~l~~Gdiv~iD~g~~~~Gy~aD~tRT~~v-G~p~~~~~~~~~~v~~a~~~~~~~~~P~G~~~~ 558 (692)
++.|| .|++ +.|+.||..++|+|+.|.+|.+|+|++|.. |+.+++|+.+|++|++++.++++++|| |+...
T Consensus 251 ~vLHYgha~apNd---~~iqdgd~cLfDmGaey~~yaSDITcsFP~nGKFTadqk~VYnaVLda~navm~a~Kp-Gv~W~ 326 (492)
T KOG2737|consen 251 AVLHYGHAGAPND---RTIQDGDLCLFDMGAEYHFYASDITCSFPVNGKFTADQKLVYNAVLDASNAVMEAMKP-GVWWV 326 (492)
T ss_pred ceeeccccCCCCC---cccCCCCEEEEecCcceeeeecccceeccCCCccchhHHHHHHHHHHHHHHHHHhcCC-CCccc
Confidence 99999 5665 999999999999999999999999999999 899999999999999999999999999 99999
Q ss_pred HHHHHHHHHH----HHcCC----------------CCcCCcccccccCCccccCCCcc-c-ccC---C-----CCccccC
Q 005523 559 VLDAFARSSL----WKIGL----------------DYRHGTGHGVGAALNVHEGPQSI-S-FRY---G-----NMTPLVE 608 (692)
Q Consensus 559 dv~~~a~~~l----~~~G~----------------~~~h~~GHgIG~~l~~hE~P~~i-~-~~~---~-----~~~~L~~ 608 (692)
|++..+..++ .+.|. .++|++||-+| |++|+---.. + .+| + ..+.|++
T Consensus 327 Dmh~La~kvlle~laq~gIl~gdvd~m~~ar~~~vF~PHGLGH~lG--lDvHDvGGyp~~~~rp~~P~l~~LR~aR~L~e 404 (492)
T KOG2737|consen 327 DMHKLAEKVLLEHLAQMGILKGDVDEMVEARLGAVFMPHGLGHFLG--LDVHDVGGYPEGVERPDEPGLRSLRTARHLKE 404 (492)
T ss_pred cHHHHHHHHHHHHHHhcCceeccHHHHHHhccCeeecccccccccc--ccccccCCCCCCCCCCCcchhhhhhhhhhhhc
Confidence 9998877654 44454 47999999999 9999821101 1 111 1 4579999
Q ss_pred CCEEEEcceeeec--------------------------CcceEEEEEEEEEecCCCCCCCCCccccCeeEccCCCCccc
Q 005523 609 GMIVSNEPGYYED--------------------------HAFGIRIENLLYVKEVGTPNRFGGVSYLGFEKLTFVPIQTK 662 (692)
Q Consensus 609 GMV~siEPgiy~~--------------------------g~~GiriEd~vlVte~~~~~~~~~~~~~G~E~LT~~P~~~~ 662 (692)
|||+++|||.|.- +.+|+||||.|+||++ |+|+||.+|++.+
T Consensus 405 ~MviTvEPGcYFi~~Ll~ealadp~~~~f~n~e~~~rfr~~GGVRIEdDv~vt~~------------G~enlt~vprtve 472 (492)
T KOG2737|consen 405 GMVITVEPGCYFIDFLLDEALADPARAEFLNREVLQRFRGFGGVRIEDDVVVTKS------------GIENLTCVPRTVE 472 (492)
T ss_pred CcEEEecCChhHHHHHHHHHhcChHhhhhhhHHHHHHhhccCceEeeccEEEecc------------ccccccCCCCCHH
Confidence 9999999999951 5679999999999999 9999999999988
Q ss_pred chhhcc
Q 005523 663 LVDLSL 668 (692)
Q Consensus 663 li~~~l 668 (692)
.|+..|
T Consensus 473 eIEa~m 478 (492)
T KOG2737|consen 473 EIEACM 478 (492)
T ss_pred HHHHHH
Confidence 888755
No 22
>cd01086 MetAP1 Methionine Aminopeptidase 1. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and Peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides.
Probab=100.00 E-value=7e-39 Score=329.00 Aligned_cols=214 Identities=23% Similarity=0.234 Sum_probs=191.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHhCCCCC-----CCCceeeeeCCCCccccccCCC
Q 005523 418 LEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGFLD-----TSFDTISGSGANGAIIHYKPEP 492 (692)
Q Consensus 418 Ie~mR~A~~i~~~a~~~~~~~l~~~i~~~~G~TE~eia~~l~~~~~~~~G~~~-----~~f~~iv~sG~~~a~~h~~p~~ 492 (692)
|+.||+|++++..++.++++.+ +||+||.|+++.+.+... ..|... .+|+..+++|.|++.+|+.|++
T Consensus 1 I~~lr~A~~i~~~~~~~~~~~~------~pG~tE~ev~~~~~~~~~-~~G~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~ 73 (238)
T cd01086 1 IEGMREAGRIVAEVLDELAKAI------KPGVTTKELDQIAHEFIE-EHGAYPAPLGYYGFPKSICTSVNEVVCHGIPDD 73 (238)
T ss_pred CHHHHHHHHHHHHHHHHHHHHc------cCCCCHHHHHHHHHHHHH-HcCCCcccccCCCCCcceecCCCCceeCCCCCC
Confidence 6899999999999999887766 999999999999987643 345432 3466778899999999999886
Q ss_pred CCCcccCCCCeEEEecceeECCeEeeeEeEEEcCCCCHHHHHHHHHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHcC
Q 005523 493 GKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIG 572 (692)
Q Consensus 493 ~~~~~l~~Gdiv~iD~g~~~~Gy~aD~tRT~~vG~p~~~~~~~~~~v~~a~~~~~~~~~P~G~~~~dv~~~a~~~l~~~G 572 (692)
++|++||+|++|+|+.|+||++|++|||++|+|+++++++|+.+++++.++++++|| |++++||++++++++++.|
T Consensus 74 ---~~l~~Gd~v~id~g~~~~GY~ad~~RT~~~G~~~~~~~~~~~~~~~~~~~~~~~~~p-G~~~~~v~~~~~~~~~~~G 149 (238)
T cd01086 74 ---RVLKDGDIVNIDVGVELDGYHGDSARTFIVGEVSEEAKKLVEVTEEALYKGIEAVKP-GNRIGDIGHAIEKYAEKNG 149 (238)
T ss_pred ---cccCCCCEEEEEEEEEECCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHhcC-CCCHHHHHHHHHHHHHHcC
Confidence 899999999999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred CC-CcCCcccccccCCccccCCCccc-ccCCCCccccCCCEEEEcceeee-----------------cCcceEEEEEEEE
Q 005523 573 LD-YRHGTGHGVGAALNVHEGPQSIS-FRYGNMTPLVEGMIVSNEPGYYE-----------------DHAFGIRIENLLY 633 (692)
Q Consensus 573 ~~-~~h~~GHgIG~~l~~hE~P~~i~-~~~~~~~~L~~GMV~siEPgiy~-----------------~g~~GiriEd~vl 633 (692)
+. +.|.+||||| +.+||.|..+. ..++++.+|++||||++||++|. +|.+|+|+||||+
T Consensus 150 ~~~~~~~~GHgiG--~~~~e~p~~~~~~~~~~~~~le~Gmv~~iep~i~~~~~~~~~~~~~~~~~~~~g~~g~~~edtv~ 227 (238)
T cd01086 150 YSVVREFGGHGIG--RKFHEEPQIPNYGRPGTGPKLKPGMVFTIEPMINLGTYEVVTLPDGWTVVTKDGSLSAQFEHTVL 227 (238)
T ss_pred cceecCccccCCC--CccccCCCcCCccCCCCCCEecCCCEEEEeeEEECCCCceEECCCCCEEEcCCCCEEEeeeeEEE
Confidence 95 5788999999 99999997441 22457899999999999999996 5778999999999
Q ss_pred EecCCCCCCCCCccccCeeEccC
Q 005523 634 VKEVGTPNRFGGVSYLGFEKLTF 656 (692)
Q Consensus 634 Vte~~~~~~~~~~~~~G~E~LT~ 656 (692)
||++ |+|+||.
T Consensus 228 Vte~------------G~e~Lt~ 238 (238)
T cd01086 228 ITED------------GPEILTL 238 (238)
T ss_pred EcCC------------cceeCCC
Confidence 9999 9999984
No 23
>cd01092 APP-like Similar to Prolidase and Aminopeptidase P. The members of this subfamily presumably catalyse hydrolysis of Xaa-Pro dipeptides and/or release of any N-terminal amino acid, including proline, that is linked with proline.
Probab=100.00 E-value=1.1e-38 Score=320.48 Aligned_cols=204 Identities=37% Similarity=0.489 Sum_probs=190.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHhCCCCCCCCceeeeeCCCCccccccCCCCCCcc
Q 005523 418 LEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGFLDTSFDTISGSGANGAIIHYKPEPGKCSV 497 (692)
Q Consensus 418 Ie~mR~A~~i~~~a~~~~~~~l~~~i~~~~G~TE~eia~~l~~~~~~~~G~~~~~f~~iv~sG~~~a~~h~~p~~~~~~~ 497 (692)
|+.||+|+++++.++.++.+.+ ++|+||.||++.++.... ..|..+.+|++++++|+|+..+|+.|++ ++
T Consensus 1 i~~~r~a~~i~~~~~~~~~~~~------~~G~te~ei~~~~~~~~~-~~g~~~~~~~~~v~~g~~~~~~h~~~~~---~~ 70 (208)
T cd01092 1 IELLRKAARIADKAFEELLEFI------KPGMTEREVAAELEYFMR-KLGAEGPSFDTIVASGPNSALPHGVPSD---RK 70 (208)
T ss_pred CHHHHHHHHHHHHHHHHHHHHC------cCCCCHHHHHHHHHHHHH-HcCCCCCCCCcEEEECccccccCCCCCC---cC
Confidence 6799999999999998887666 999999999999987654 4677778999999999999999999976 88
Q ss_pred cCCCCeEEEecceeECCeEeeeEeEEEcCCCCHHHHHHHHHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHcCC--CC
Q 005523 498 VDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGL--DY 575 (692)
Q Consensus 498 l~~Gdiv~iD~g~~~~Gy~aD~tRT~~vG~p~~~~~~~~~~v~~a~~~~~~~~~P~G~~~~dv~~~a~~~l~~~G~--~~ 575 (692)
+++||+|.+|+|++|+||++|++||+++|+|+++++++|+++.+++.++++++|| |++++||++++++.+++.|+ ++
T Consensus 71 l~~gd~v~id~g~~~~gy~~d~~RT~~~g~~~~~~~~~~~~~~~~~~~~~~~~~p-G~~~~di~~~~~~~~~~~g~~~~~ 149 (208)
T cd01092 71 IEEGDLVLIDFGAIYDGYCSDITRTVAVGEPSDELKEIYEIVLEAQQAAIKAVKP-GVTAKEVDKAARDVIEEAGYGEYF 149 (208)
T ss_pred cCCCCEEEEEeeeeECCEeccceeEEECCCCCHHHHHHHHHHHHHHHHHHHHcCC-CCcHHHHHHHHHHHHHHcCccccC
Confidence 9999999999999999999999999999999999999999999999999999999 99999999999999999998 58
Q ss_pred cCCcccccccCCccccCCCcccccCCCCccccCCCEEEEcceeeecCcceEEEEEEEEEecC
Q 005523 576 RHGTGHGVGAALNVHEGPQSISFRYGNMTPLVEGMIVSNEPGYYEDHAFGIRIENLLYVKEV 637 (692)
Q Consensus 576 ~h~~GHgIG~~l~~hE~P~~i~~~~~~~~~L~~GMV~siEPgiy~~g~~GiriEd~vlVte~ 637 (692)
.|++||||| +..||.|. +. ++++.+|++||||+|||++|.++.+|+++||+|+||++
T Consensus 150 ~~~~Gh~iG--~~~~e~p~-i~--~~~~~~l~~gmv~~iep~~~~~~~~g~~~ed~v~vt~~ 206 (208)
T cd01092 150 IHRTGHGVG--LEVHEAPY-IS--PGSDDVLEEGMVFTIEPGIYIPGKGGVRIEDDVLVTED 206 (208)
T ss_pred CCCCccccC--cccCcCCC-cC--CCCCCCcCCCCEEEECCeEEecCCCEEEeeeEEEECCC
Confidence 899999999 99999997 54 35889999999999999999999999999999999998
No 24
>cd01091 CDC68-like Related to aminopeptidase P and aminopeptidase M, a member of this domain family is present in cell division control protein 68, a transcription factor.
Probab=100.00 E-value=1.1e-38 Score=327.12 Aligned_cols=215 Identities=19% Similarity=0.217 Sum_probs=190.1
Q ss_pred HHHHHHHHHHHHHHHHHH-HHHHHHHhhcCCC--CCHHHHHHHHHHHHHHhCCCC---------CCCCceeeeeCCCC-c
Q 005523 418 LEGMLNSHLRDAAALAQF-WVWLEEEIHNGAK--LTEVDVADKLLEFRSKQSGFL---------DTSFDTISGSGANG-A 484 (692)
Q Consensus 418 Ie~mR~A~~i~~~a~~~~-~~~l~~~i~~~~G--~TE~eia~~l~~~~~~~~G~~---------~~~f~~iv~sG~~~-a 484 (692)
|+.+|+|+.++..+|..+ ...+++.| .+| +|+.+++..++..+. ..+.. +.+|++|++||+|+ .
T Consensus 1 ~~~~~~a~~~~~~~~~~~~~~~~~~~i--d~~~~~t~~~l~~~~e~~~~-~~~~~~~~~~~~~~~~~y~~iv~sG~~~~~ 77 (243)
T cd01091 1 LNNIKKASDATVDVLKKFFVDEVEEII--DQEKKVTHSKLSDKVEKAIE-DKKKYKAKLDPEQLDWCYPPIIQSGGNYDL 77 (243)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHH--hccccccHHHHHHHHHHHHh-CchhhhcCCCHHHcCcccCCeEeECcCccc
Confidence 468999999999999654 45788888 666 999999999997643 34433 67999999999999 8
Q ss_pred cccccCCCCCCcccCCCCeEEEecceeECCeEeeeEeEEEcCCCCHHHHHHHHHHHHHHHHHHHccCCCCCChHHHHHHH
Q 005523 485 IIHYKPEPGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFPQSTPGFVLDAFA 564 (692)
Q Consensus 485 ~~h~~p~~~~~~~l~~Gdiv~iD~g~~~~Gy~aD~tRT~~vG~p~~~~~~~~~~v~~a~~~~~~~~~P~G~~~~dv~~~a 564 (692)
.+|+.+++ +.+..|++|++|+|+.|+|||+|+||||++| |+++|+++|+++++++.++++++|| |+++++|++++
T Consensus 78 l~h~~~s~---~~~~~~~~vl~d~G~~y~gY~sditRT~~v~-p~~~~~~~y~~~~~a~~~~i~~lkp-G~~~~dv~~~a 152 (243)
T cd01091 78 LKSSSSSD---KLLYHFGVIICSLGARYKSYCSNIARTFLID-PTSEQQKNYNFLLALQEEILKELKP-GAKLSDVYQKT 152 (243)
T ss_pred CCCCCCCc---cccCCCCEEEEEeCcccCCEeecceEEEEcC-CCHHHHHHHHHHHHHHHHHHHHcCC-CCcHHHHHHHH
Confidence 99998876 8899999999999999999999999999998 7999999999999999999999999 99999999999
Q ss_pred HHHHHHcCC----CCcCCcccccccCCccccCCCcccccCCCCccccCCCEEEEcceee-ecC---------cceEEEEE
Q 005523 565 RSSLWKIGL----DYRHGTGHGVGAALNVHEGPQSISFRYGNMTPLVEGMIVSNEPGYY-EDH---------AFGIRIEN 630 (692)
Q Consensus 565 ~~~l~~~G~----~~~h~~GHgIG~~l~~hE~P~~i~~~~~~~~~L~~GMV~siEPgiy-~~g---------~~GiriEd 630 (692)
++++.+.|. ++.|++||||| +++||.|..++ ++++.+|++||||++|||+| .++ .+|+||||
T Consensus 153 ~~~i~~~~~~~~~~~~~~~GHgiG--le~hE~~~~l~--~~~~~~L~~GMvf~vepGi~~~~~~~~~~~~~~~~gv~ieD 228 (243)
T cd01091 153 LDYIKKKKPELEPNFTKNLGFGIG--LEFRESSLIIN--AKNDRKLKKGMVFNLSIGFSNLQNPEPKDKESKTYALLLSD 228 (243)
T ss_pred HHHHHHhChhHHHhCcCCcccccC--cccccCccccC--CCCCCCcCCCCEEEEeCCcccccCccccCccCCeeEEEEEE
Confidence 999999873 47899999999 99999886454 34789999999999999999 443 68999999
Q ss_pred EEEEecCCCCCCCCCccccCe-eEccC
Q 005523 631 LLYVKEVGTPNRFGGVSYLGF-EKLTF 656 (692)
Q Consensus 631 ~vlVte~~~~~~~~~~~~~G~-E~LT~ 656 (692)
||+||++ |+ |+||.
T Consensus 229 tV~Vt~~------------G~~~~LT~ 243 (243)
T cd01091 229 TILVTED------------EPAIVLTN 243 (243)
T ss_pred EEEEcCC------------CCceecCC
Confidence 9999999 88 99984
No 25
>PF00557 Peptidase_M24: Metallopeptidase family M24 This Prosite entry corresponds to sub-family M24B This Prosite entry corresponds to sub-families M24A and M24C; InterPro: IPR000994 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This entry contains proteins that belong to MEROPS peptidase family M24 (clan MG), which share a common structural-fold, the "pita-bread" fold. The fold contains both alpha helices and an anti-parallel beta sheet within two structurally similar domains that are thought to be derived from an ancient gene duplication. The active site, where conserved, is located between the two domains. The fold is common to methionine aminopeptidase (3.4.11.18 from EC), aminopeptidase P (3.4.11.9 from EC), prolidase (3.4.13.9 from EC), agropine synthase and creatinase (3.5.3.3 from EC). Though many of these peptidases require a divalent cation, creatinase is not a metal-dependent enzyme [, , ]. The entry also contains proteins that have lost catalytic activity, for example Spt16, which is a component of the FACT complex. The crystal structure of the N-terminal domain of Spt16, determined to 2.1A, reveals an aminopeptidase P fold whose enzymatic activity has been lost. This fold binds directly to histones H3-H4 through a interaction with their globular core domains, as well as with their N-terminal tails []. The FACT complex is a stable heterodimer in Saccharomyces cerevisiae (Baker's yeast) comprising Spt16p (P32558 from SWISSPROT, IPR013953 from INTERPRO) and Pob3p (Q04636 from SWISSPROT, IPR000969 from INTERPRO). The complex plays a role in transcription initiation and promotes binding of TATA-binding protein (TBP) to a TATA box in chromatin []; it also facilitates RNA Polymerase II transcription elongation through nucleosomes by destabilising and then reassembling nucleosome structure [, , ]. ; GO: 0009987 cellular process; PDB: 4A6V_B 4A6W_A 3CTZ_A 3IG4_B 2B3H_A 2NQ6_A 2NQ7_A 2GZ5_A 2G6P_A 2B3L_A ....
Probab=100.00 E-value=3.1e-37 Score=309.93 Aligned_cols=203 Identities=31% Similarity=0.460 Sum_probs=185.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHhCCCCCCCCceeeeeCCCCccccccCCCCCCccc
Q 005523 419 EGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGFLDTSFDTISGSGANGAIIHYKPEPGKCSVV 498 (692)
Q Consensus 419 e~mR~A~~i~~~a~~~~~~~l~~~i~~~~G~TE~eia~~l~~~~~~~~G~~~~~f~~iv~sG~~~a~~h~~p~~~~~~~l 498 (692)
|.||+|++++++++.++++.+ +||+||.||++.+.+.+....|....+|++++++|+|+..+|+.|++ ++|
T Consensus 1 e~~R~a~~i~~~~~~~~~~~~------~~G~te~ei~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~---~~l 71 (207)
T PF00557_consen 1 ECMRKAARIADAAMEAAMEAL------RPGMTEYEIAAAIERAMLRRHGGEEPAFPPIVGSGPNTDLPHYTPTD---RRL 71 (207)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH------STTCBHHHHHHHHHHHHHHHTTTTEESSESEEEECCCCGETTTBCCS---SBE
T ss_pred CHHHHHHHHHHHHHHHHHHHc------cCCCcHHHHHHHHHHHHHHHcCCCcccCCceEecCCcceecceeccc---eee
Confidence 689999999999999998877 99999999999999764455677778999999999999999998865 899
Q ss_pred CCCCeEEEecceeECCeEeeeEeEEEcCCCCHHHHHHHHHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHcCC--CCc
Q 005523 499 DSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGL--DYR 576 (692)
Q Consensus 499 ~~Gdiv~iD~g~~~~Gy~aD~tRT~~vG~p~~~~~~~~~~v~~a~~~~~~~~~P~G~~~~dv~~~a~~~l~~~G~--~~~ 576 (692)
++||+|.+|+|++|+||++|++||+++| |+++++++|+.+++++.++++++|| |++++||++++++.+.+.|+ .+.
T Consensus 72 ~~gd~v~id~~~~~~gy~~d~~Rt~~~G-~~~~~~~~~~~~~~~~~~~~~~~~p-G~~~~~v~~~~~~~~~~~g~~~~~~ 149 (207)
T PF00557_consen 72 QEGDIVIIDFGPRYDGYHADIARTFVVG-PTPEQRRAYEAAREALEAAIEALRP-GVTGSDVYEAVREVLEEYGLEEPYP 149 (207)
T ss_dssp STTEEEEEEEEEEETTEEEEEEEEEESS-SHHHHHHHHHHHHHHHHHHHHH-ST-TSBHHHHHHHHHHHHHHTTEGEEBT
T ss_pred ecCCcceeeccceeeeeEeeeeeEEEEe-ecccccchhhhhHHHHHhHhhhccc-ccccchhhHHHHHHHHhhcccceee
Confidence 9999999999999999999999999999 9999999999999999999999999 99999999999999999998 688
Q ss_pred CCcccccccCCccccC-CCcccccCCCCccccCCCEEEEcceee-ecCcceEEEEEEEEEec
Q 005523 577 HGTGHGVGAALNVHEG-PQSISFRYGNMTPLVEGMIVSNEPGYY-EDHAFGIRIENLLYVKE 636 (692)
Q Consensus 577 h~~GHgIG~~l~~hE~-P~~i~~~~~~~~~L~~GMV~siEPgiy-~~g~~GiriEd~vlVte 636 (692)
|.+||||| +++||. |. +. +++++.+|++||||++||+++ .++++|+++||+|+||+
T Consensus 150 ~~~GH~iG--~~~~~~~P~-i~-~~~~~~~l~~gmv~~iep~~~~~~~~~g~~~ed~v~Vte 207 (207)
T PF00557_consen 150 HGLGHGIG--LEFHEPGPN-IA-RPGDDTVLEPGMVFAIEPGLYFIPGWGGVRFEDTVLVTE 207 (207)
T ss_dssp SSSEEEES--SSSSEEEEE-ES-STTTSSB--TTBEEEEEEEEEEETTSEEEEEBEEEEEES
T ss_pred eccccccc--cccccccee-ee-cccccceecCCCceeEeeeEEccCCCcEEEEEEEEEECc
Confidence 99999999 999997 97 43 135899999999999999999 67899999999999996
No 26
>cd01066 APP_MetAP A family including aminopeptidase P, aminopeptidase M, and prolidase. Also known as metallopeptidase family M24. This family of enzymes is able to cleave amido-, imido- and amidino-containing bonds. Members exibit relatively narrow substrate specificity compared to other metallo-aminopeptidases, suggesting they play roles in regulation of biological processes rather than general protein degradation.
Probab=100.00 E-value=7.1e-35 Score=290.90 Aligned_cols=203 Identities=33% Similarity=0.460 Sum_probs=187.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHhCCCCCCCCceeeeeCCCCccccccCCCCCCcc
Q 005523 418 LEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGFLDTSFDTISGSGANGAIIHYKPEPGKCSV 497 (692)
Q Consensus 418 Ie~mR~A~~i~~~a~~~~~~~l~~~i~~~~G~TE~eia~~l~~~~~~~~G~~~~~f~~iv~sG~~~a~~h~~p~~~~~~~ 497 (692)
|+.||+|+++++.++.++++.+ +||+||.|+++.+.+... ..|. ..++++++++|+|+..+|+.|++ ++
T Consensus 1 i~~~r~a~~i~~~~~~~~~~~~------~~G~te~ei~~~~~~~~~-~~g~-~~~~~~~v~~g~~~~~~h~~~~~---~~ 69 (207)
T cd01066 1 IARLRKAAEIAEAAMAAAAEAI------RPGVTEAEVAAAIEQALR-AAGG-YPAGPTIVGSGARTALPHYRPDD---RR 69 (207)
T ss_pred CHHHHHHHHHHHHHHHHHHHHC------cCCCCHHHHHHHHHHHHH-HcCC-CCCCCcEEEECccccCcCCCCCC---CC
Confidence 5789999999999999888776 999999999999987644 4555 57788999999999999999875 89
Q ss_pred cCCCCeEEEecceeECCeEeeeEeEEEcCCCCHHHHHHHHHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHcCC--CC
Q 005523 498 VDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGL--DY 575 (692)
Q Consensus 498 l~~Gdiv~iD~g~~~~Gy~aD~tRT~~vG~p~~~~~~~~~~v~~a~~~~~~~~~P~G~~~~dv~~~a~~~l~~~G~--~~ 575 (692)
+++||+|++|+|+.|+||++|++||+++|+|+++++++|+.+.++++++++.++| |+++.||++++++.+++.|+ ++
T Consensus 70 i~~gd~v~~d~g~~~~gy~~d~~rt~~~g~~~~~~~~~~~~~~~~~~~~~~~i~p-G~~~~ei~~~~~~~~~~~g~~~~~ 148 (207)
T cd01066 70 LQEGDLVLVDLGGVYDGYHADLTRTFVIGEPSDEQRELYEAVREAQEAALAALRP-GVTAEEVDAAAREVLEEHGLGPNF 148 (207)
T ss_pred cCCCCEEEEEeceeECCCccceeceeEcCCCCHHHHHHHHHHHHHHHHHHHHhcC-CCcHHHHHHHHHHHHHHcCccccC
Confidence 9999999999999999999999999999999999999999999999999999999 99999999999999999998 58
Q ss_pred cCCcccccccCCccccCCCcccccCCCCccccCCCEEEEcceeeecCcceEEEEEEEEEecC
Q 005523 576 RHGTGHGVGAALNVHEGPQSISFRYGNMTPLVEGMIVSNEPGYYEDHAFGIRIENLLYVKEV 637 (692)
Q Consensus 576 ~h~~GHgIG~~l~~hE~P~~i~~~~~~~~~L~~GMV~siEPgiy~~g~~GiriEd~vlVte~ 637 (692)
.|.+||||| +..||.|. +. ++++.+|++||||++||++|.++.+|+++||+|+||++
T Consensus 149 ~~~~Gh~iG--~~~~e~~~-~~--~~~~~~l~~gmv~~iep~~~~~~~~g~~~ed~v~vt~~ 205 (207)
T cd01066 149 GHRTGHGIG--LEIHEPPV-LK--AGDDTVLEPGMVFAVEPGLYLPGGGGVRIEDTVLVTED 205 (207)
T ss_pred CCCCccccC--cccCCCCC-cC--CCCCCCcCCCCEEEECCEEEECCCcEEEeeeEEEEeCC
Confidence 899999999 99999997 43 44789999999999999999998899999999999998
No 27
>cd01089 PA2G4-like Related to aminopepdidase M, this family contains proliferation-associated protein 2G4. Family members have been implicated in cell cycle control.
Probab=100.00 E-value=7.2e-35 Score=297.18 Aligned_cols=208 Identities=12% Similarity=0.092 Sum_probs=177.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHH---------hCCCCCCCCceeeeeCCCCccccc
Q 005523 418 LEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSK---------QSGFLDTSFDTISGSGANGAIIHY 488 (692)
Q Consensus 418 Ie~mR~A~~i~~~a~~~~~~~l~~~i~~~~G~TE~eia~~l~~~~~~---------~~G~~~~~f~~iv~sG~~~a~~h~ 488 (692)
++.||+|+++++.++.++.+.+ ++|+||.|++...+..... ..|..+.+|+++++ .|++.+|+
T Consensus 1 ~~~~r~A~~I~~~~~~~~~~~i------~pG~te~ei~~~~e~~i~~~~~~~~~~~~~g~~g~~~~~~v~--~n~~~~H~ 72 (228)
T cd01089 1 VTKYKTAGQIANKVLKQVISLC------VPGAKVVDLCEKGDKLILEELGKVYKKEKKLEKGIAFPTCIS--VNNCVCHF 72 (228)
T ss_pred CHHHHHHHHHHHHHHHHHHHhc------cCCCcHHHHHHHHHHHHHHhhcccccCcccccCCCCcCeEec--cCceeecC
Confidence 4689999999999999888776 9999999998766544322 14556778888877 48889999
Q ss_pred cCCC-CCCcccCCCCeEEEecceeECCeEeeeEeEEEcCCCCH-----HHHHHHHHHHHHHHHHHHccCCCCCChHHHHH
Q 005523 489 KPEP-GKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTA-----REKECFTRVLQGHIALDQAIFPQSTPGFVLDA 562 (692)
Q Consensus 489 ~p~~-~~~~~l~~Gdiv~iD~g~~~~Gy~aD~tRT~~vG~p~~-----~~~~~~~~v~~a~~~~~~~~~P~G~~~~dv~~ 562 (692)
.|.. .++++|++||+|++|+|+.|+||++|+||||++|+|++ +++++|++++++++++++++|| |++++||++
T Consensus 73 ~p~~~~~~~~l~~Gd~v~iD~g~~~~GY~sD~tRT~~vG~~~~~~~~~~~~~~~~~~~ea~~~~~~~~kp-G~~~~dv~~ 151 (228)
T cd01089 73 SPLKSDATYTLKDGDVVKIDLGCHIDGYIAVVAHTIVVGAEAETPVTGKKADVIAAAHYALEAALRLLRP-GNQNSDITE 151 (228)
T ss_pred CCCCCCCCcccCCCCEEEEEEEEEECCEEEEEEEEEEeCCcCccccchHHHHHHHHHHHHHHHHHHHhCC-CCcHHHHHH
Confidence 9743 24589999999999999999999999999999998874 8999999999999999999999 999999999
Q ss_pred HHHHHHHHcCC-----CCcCCcccccccCCccccCCCcccccCCCCccccCCCEEEEcceeeecCcceEEEEEEEEEecC
Q 005523 563 FARSSLWKIGL-----DYRHGTGHGVGAALNVHEGPQSISFRYGNMTPLVEGMIVSNEPGYYEDHAFGIRIENLLYVKEV 637 (692)
Q Consensus 563 ~a~~~l~~~G~-----~~~h~~GHgIG~~l~~hE~P~~i~~~~~~~~~L~~GMV~siEPgiy~~g~~GiriEd~vlVte~ 637 (692)
++++++.+.|+ .+.|++||+ +..++++.. -..+|++||||++||+++.+|.+|+++||||+||++
T Consensus 152 a~~~~~~~~G~~~~~~~~~h~~g~~----~~~~~~~~~------~~~~l~~gmvf~~ep~~~~~g~~~~~~~~Tv~vt~~ 221 (228)
T cd01089 152 AIQKVIVDYGCTPVEGVLSHQLKRV----VSSGEGKAK------LVECVKHGLLFPYPVLYEKEGEVVAQFKLTVLLTPN 221 (228)
T ss_pred HHHHHHHHcCCEEecCccccCcCce----EecCCCCcc------chhhccCCcccccceeEccCCCeEEEEEEEEEEcCC
Confidence 99999999996 245666664 445665521 368899999999999999999999999999999999
Q ss_pred CCCCCCCCccccCeeEccC
Q 005523 638 GTPNRFGGVSYLGFEKLTF 656 (692)
Q Consensus 638 ~~~~~~~~~~~~G~E~LT~ 656 (692)
|+|.||.
T Consensus 222 ------------G~e~lt~ 228 (228)
T cd01089 222 ------------GVTVLTG 228 (228)
T ss_pred ------------CCeeCCC
Confidence 9999983
No 28
>COG0024 Map Methionine aminopeptidase [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=1.9e-32 Score=276.81 Aligned_cols=222 Identities=24% Similarity=0.274 Sum_probs=192.2
Q ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHH------hCCCCCCCCceeeeeCCCCcc
Q 005523 412 VKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSK------QSGFLDTSFDTISGSGANGAI 485 (692)
Q Consensus 412 vKs~~EIe~mR~A~~i~~~a~~~~~~~l~~~i~~~~G~TE~eia~~l~~~~~~------~~G~~~~~f~~iv~sG~~~a~ 485 (692)
+|+++||+.||+|+++...++..+...+ +||+|-.||...++++... ..|+.+ |+--++..-|...
T Consensus 5 ikt~~eiek~r~Ag~i~a~~l~~~~~~v------~pGvtt~Eld~~~~~~i~~~ga~pa~~gy~g--~~~~~ciSvNe~v 76 (255)
T COG0024 5 IKTPEEIEKMREAGKIAAKALKEVASLV------KPGVTTLELDEIAEEFIREKGAYPAFLGYKG--FPFPTCISVNEVV 76 (255)
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHHc------CCCCCHHHHHHHHHHHHHHcCceehhccCcC--CCcceEeehhhee
Confidence 8999999999999999999988776655 9999999999999987653 233433 4445566689999
Q ss_pred ccccCCCCCCcccCCCCeEEEecceeECCeEeeeEeEEEcCCCC-HHHHHHHHHHHHHHHHHHHccCCCCCChHHHHHHH
Q 005523 486 IHYKPEPGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPT-AREKECFTRVLQGHIALDQAIFPQSTPGFVLDAFA 564 (692)
Q Consensus 486 ~h~~p~~~~~~~l~~Gdiv~iD~g~~~~Gy~aD~tRT~~vG~p~-~~~~~~~~~v~~a~~~~~~~~~P~G~~~~dv~~~a 564 (692)
+|+.|+ +.+.|++||+|.||+|+.++||++|.++||.+|+.+ +..+++.+++.++..++++.+|| |++.++|-+++
T Consensus 77 ~HgiP~--d~~vlk~GDiv~IDvg~~~dG~~~Dsa~T~~vg~~~~~~~~~L~~~t~eal~~~I~~vkp-G~~l~~Ig~aI 153 (255)
T COG0024 77 AHGIPG--DKKVLKEGDIVKIDVGAHIDGYIGDTAITFVVGEVSDEDAKRLLEATKEALYAGIEAVKP-GARLGDIGRAI 153 (255)
T ss_pred eecCCC--CCcccCCCCEEEEEEEEEECCeeeeEEEEEECCCCChHHHHHHHHHHHHHHHHHHHhccC-CCCHHHHHHHH
Confidence 999998 358999999999999999999999999999999655 57777999999999999999999 99999999999
Q ss_pred HHHHHHcCCC-CcCCcccccccCCccccCCCccccc-CCCCccccCCCEEEEcceeee------------------cCcc
Q 005523 565 RSSLWKIGLD-YRHGTGHGVGAALNVHEGPQSISFR-YGNMTPLVEGMIVSNEPGYYE------------------DHAF 624 (692)
Q Consensus 565 ~~~l~~~G~~-~~h~~GHgIG~~l~~hE~P~~i~~~-~~~~~~L~~GMV~siEPgiy~------------------~g~~ 624 (692)
+++++.+||. ....+||||| ...||.|++.++. .+...+|++||||+|||.+.. ++..
T Consensus 154 q~~~~~~G~~vVr~~~GHgig--~~~He~p~ip~y~~~~~~~~l~~Gmv~aIEPmi~~G~~~~~~~~~d~Wt~~t~d~~~ 231 (255)
T COG0024 154 QEYAESRGFSVVRNLTGHGIG--RELHEEPSIPNYGKDGTGVRLKEGMVFAIEPMINTGSGEVVEGPSDRWTLVTKDGSL 231 (255)
T ss_pred HHHHHHcCCEEeecccCCccC--cccCCCCeeccccCCCCCcccCCCCEEEEeeEEEcCCCceEecCCCCeEEEeCCCCE
Confidence 9999999995 6778999999 8999999977643 234589999999999998864 2345
Q ss_pred eEEEEEEEEEecCCCCCCCCCccccCeeEccCCC
Q 005523 625 GIRIENLLYVKEVGTPNRFGGVSYLGFEKLTFVP 658 (692)
Q Consensus 625 GiriEd~vlVte~~~~~~~~~~~~~G~E~LT~~P 658 (692)
.++.|+||+||++ |+|+||..+
T Consensus 232 ~aq~EHTv~Vt~~------------g~eilT~~~ 253 (255)
T COG0024 232 SAQFEHTVIVTED------------GCEILTLRP 253 (255)
T ss_pred EeEEEEEEEEeCC------------CcEEeeCCC
Confidence 6899999999999 999999765
No 29
>KOG2738 consensus Putative methionine aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=99.97 E-value=1.1e-30 Score=259.78 Aligned_cols=224 Identities=17% Similarity=0.154 Sum_probs=198.1
Q ss_pred cccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHhCCCCC----CCCceeeeeCCCCcc
Q 005523 410 KAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGFLD----TSFDTISGSGANGAI 485 (692)
Q Consensus 410 R~vKs~~EIe~mR~A~~i~~~a~~~~~~~l~~~i~~~~G~TE~eia~~l~~~~~~~~G~~~----~~f~~iv~sG~~~a~ 485 (692)
-.|.++++|+.||.|++++...+..+...+ +||+|..||...+.++..+.+.+.. ..||-.+++..|..+
T Consensus 114 i~i~~~e~ie~mR~ac~LarevLd~Aa~~v------~PgvTTdEiD~~VH~a~Ierg~YPSPLnYy~FPKS~CTSVNEvi 187 (369)
T KOG2738|consen 114 IKILDPEGIEGMRKACRLAREVLDYAATLV------RPGVTTDEIDRAVHNAIIERGAYPSPLNYYGFPKSVCTSVNEVI 187 (369)
T ss_pred eeccCHHHHHHHHHHHHHHHHHHHHHhhhc------CCCccHHHHHHHHHHHHHhcCCcCCCcccCCCchhhhcchhhee
Confidence 357899999999999999999888776665 9999999999999987665444332 368888999999999
Q ss_pred ccccCCCCCCcccCCCCeEEEecceeECCeEeeeEeEEEcCCCCHHHHHHHHHHHHHHHHHHHccCCCCCChHHHHHHHH
Q 005523 486 IHYKPEPGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFPQSTPGFVLDAFAR 565 (692)
Q Consensus 486 ~h~~p~~~~~~~l~~Gdiv~iD~g~~~~Gy~aD~tRT~~vG~p~~~~~~~~~~v~~a~~~~~~~~~P~G~~~~dv~~~a~ 565 (692)
+|+.|+. |+|+.||+|.||+...++||+.|+.+||++|+.+++.+++.+...++++.+++.+|| |++..+|...+.
T Consensus 188 CHGIPD~---RpLedGDIvNiDVtvY~~GyHGDlneTffvG~Vde~~k~LVkvT~EcL~kaI~~~kp-Gv~freiG~iI~ 263 (369)
T KOG2738|consen 188 CHGIPDS---RPLEDGDIVNIDVTVYLNGYHGDLNETFFVGNVDEKAKKLVKVTRECLEKAIAIVKP-GVSFREIGNIIQ 263 (369)
T ss_pred ecCCCCc---CcCCCCCEEeEEEEEEeccccCccccceEeeccCHHHHHHHHHHHHHHHHHHHHhCC-chhHHHHHHHHH
Confidence 9999987 999999999999999999999999999999999999999999999999999999999 999999999999
Q ss_pred HHHHHcCCC-CcCCcccccccCCccccCCCcccccCC-CCccccCCCEEEEcceeee-----------------cCcceE
Q 005523 566 SSLWKIGLD-YRHGTGHGVGAALNVHEGPQSISFRYG-NMTPLVEGMIVSNEPGYYE-----------------DHAFGI 626 (692)
Q Consensus 566 ~~l~~~G~~-~~h~~GHgIG~~l~~hE~P~~i~~~~~-~~~~L~~GMV~siEPgiy~-----------------~g~~Gi 626 (692)
+...+.|+. ....+||||| --.|-.|.+..+..+ ...++++||+|+|||++.+ +|....
T Consensus 264 kha~~~g~sVVr~ycGHGig--~~FH~~PnipHya~n~a~GvM~~G~tFTIEPmit~G~~~d~tWPD~WT~vTaDG~~sA 341 (369)
T KOG2738|consen 264 KHATKNGYSVVRSYCGHGIG--RVFHCAPNIPHYAKNKAPGVMKPGQTFTIEPMITIGTWEDITWPDDWTAVTADGKRSA 341 (369)
T ss_pred HHhhhcCceeehhhhccccc--cccccCCCchhhcccCCcceeecCceEEeeeeecccccccccCCCCceEEecCCceec
Confidence 999999996 6778999999 668999986555432 4579999999999999864 245578
Q ss_pred EEEEEEEEecCCCCCCCCCccccCeeEccCC
Q 005523 627 RIENLLYVKEVGTPNRFGGVSYLGFEKLTFV 657 (692)
Q Consensus 627 riEd~vlVte~~~~~~~~~~~~~G~E~LT~~ 657 (692)
++|.|+|||++ |+|+||..
T Consensus 342 QFEhTlLVT~t------------G~EILT~r 360 (369)
T KOG2738|consen 342 QFEHTLLVTET------------GCEILTKR 360 (369)
T ss_pred ceeeEEEEecc------------cceehhcc
Confidence 99999999999 99999963
No 30
>PTZ00053 methionine aminopeptidase 2; Provisional
Probab=99.97 E-value=5.1e-30 Score=279.91 Aligned_cols=196 Identities=15% Similarity=0.128 Sum_probs=168.6
Q ss_pred cccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHH---hCCC-CCCCCceeeeeCCCCcc
Q 005523 410 KAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSK---QSGF-LDTSFDTISGSGANGAI 485 (692)
Q Consensus 410 R~vKs~~EIe~mR~A~~i~~~a~~~~~~~l~~~i~~~~G~TE~eia~~l~~~~~~---~~G~-~~~~f~~iv~sG~~~a~ 485 (692)
+..++++||+.||+|+.++.+++..+.+.+ +||+|+.||++.++..... ..|. .+.+||+.+ +.|.+.
T Consensus 150 ~~~~s~~EI~~~R~AaeIa~~vl~~~~~~I------kpG~se~EIa~~ie~~ir~~~~~~G~~~g~aFPt~v--S~N~~a 221 (470)
T PTZ00053 150 LEKLSEEQYQDLRRAAEVHRQVRRYAQSVI------KPGVKLIDICERIESKSRELIEADGLKCGWAFPTGC--SLNHCA 221 (470)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHHHHHh------hCCCCHHHHHHHHHHHHHHHHHhcCCcccCCCCcee--ecCccc
Confidence 344799999999999999999988877666 9999999999988764322 2344 367898865 478889
Q ss_pred ccccCCCCCCcccCCCCeEEEecceeECCeEeeeEeEEEcCCCCHHHHHHHHHHHHHHHHHHHccCCCCCChHHHHHHHH
Q 005523 486 IHYKPEPGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFPQSTPGFVLDAFAR 565 (692)
Q Consensus 486 ~h~~p~~~~~~~l~~Gdiv~iD~g~~~~Gy~aD~tRT~~vG~p~~~~~~~~~~v~~a~~~~~~~~~P~G~~~~dv~~~a~ 565 (692)
+|+.|+..++++|+.||+|.||+|++|+||++|++||+++| ++++++++++.+|+.+++++++| |++++||+++++
T Consensus 222 aH~tP~~gd~~vLk~GDvVkID~G~~vdGYiaD~ArTv~vg---~~~~~L~eAv~eA~~aaI~~~kp-Gv~~~dI~~AIq 297 (470)
T PTZ00053 222 AHYTPNTGDKTVLTYDDVCKLDFGTHVNGRIIDCAFTVAFN---PKYDPLLQATKDATNTGIKEAGI-DVRLSDIGAAIQ 297 (470)
T ss_pred cCCCCCCCCCcEecCCCeEEEEEeEEECCEEEeEEEEEEeC---HHHHHHHHHHHHHHHHHHHHhcC-CCcHHHHHHHHH
Confidence 99999754458999999999999999999999999999998 58899999999999999999999 999999999999
Q ss_pred HHHHHcCCC----------CcCCcccccccCC-ccccCCCcccccCCCCccccCCCEEEEcceee
Q 005523 566 SSLWKIGLD----------YRHGTGHGVGAAL-NVHEGPQSISFRYGNMTPLVEGMIVSNEPGYY 619 (692)
Q Consensus 566 ~~l~~~G~~----------~~h~~GHgIG~~l-~~hE~P~~i~~~~~~~~~L~~GMV~siEPgiy 619 (692)
+++.++|+. +.|.+||||| + .+|++|.+....+++..+|++||||+|||.+.
T Consensus 298 evies~G~e~~Gk~f~~k~I~nltGHgIG--~y~iHe~k~iP~v~~~~~~~LeeGmVfaIEPf~s 360 (470)
T PTZ00053 298 EVIESYEVEIKGKTYPIKSIRNLNGHSIG--PYIIHGGKSVPIVKGGENTRMEEGELFAIETFAS 360 (470)
T ss_pred HHHHHcCCcccCcccccccccCCcccCCC--CccccCCCcCCeeCCCCCCEecCCCEEEEcceee
Confidence 999999972 3799999999 6 79997664444456789999999999999764
No 31
>TIGR00495 crvDNA_42K 42K curved DNA binding protein. Proteins identified by this model have been identified in a number of species as a nuclear (but not nucleolar) protein with a cell cycle dependence. Various names given to members of this family have included cell cycle protein p38-2G4, DNA-binding protein GBP16, and proliferation-associated protein 1. This protein is closely related to methionine aminopeptidase, a cobolt-binding protein.
Probab=99.97 E-value=9.4e-30 Score=276.61 Aligned_cols=199 Identities=13% Similarity=0.050 Sum_probs=169.6
Q ss_pred cccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHh---------CCCCCCCCceeeeeC
Q 005523 410 KAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQ---------SGFLDTSFDTISGSG 480 (692)
Q Consensus 410 R~vKs~~EIe~mR~A~~i~~~a~~~~~~~l~~~i~~~~G~TE~eia~~l~~~~~~~---------~G~~~~~f~~iv~sG 480 (692)
-.+|+|+||+.||+|++++..++..+.+.+ +||+|+.||++..+++.... .+..+.+|+++++
T Consensus 11 ~~i~~~~eI~~~r~Aa~Ia~~~l~~~~~~i------kpG~t~~el~~~~~~~i~~~~a~~~~~~~~~~~g~afpt~vS-- 82 (389)
T TIGR00495 11 YSLSNPEVVTKYKMAGEIANNVLKSVVEAC------SPGAKVVDICEKGDAFIMEETAKIFKKEKEMEKGIAFPTCIS-- 82 (389)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHHHHhC------CCCCCHHHHHHHHHHHHHHhhhhhhcccccccCCCCCCeEEe--
Confidence 479999999999999999999998888776 99999999998876654321 2345778988876
Q ss_pred CCCccccccCCCC-CCcccCCCCeEEEecceeECCeEeeeEeEEEcCC-----CCHHHHHHHHHHHHHHHHHHHccCCCC
Q 005523 481 ANGAIIHYKPEPG-KCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGE-----PTAREKECFTRVLQGHIALDQAIFPQS 554 (692)
Q Consensus 481 ~~~a~~h~~p~~~-~~~~l~~Gdiv~iD~g~~~~Gy~aD~tRT~~vG~-----p~~~~~~~~~~v~~a~~~~~~~~~P~G 554 (692)
.|...+|+.|... +++.|++||+|.||+|++++||++|++|||++|+ ++++++++++++.+|+.+++++++| |
T Consensus 83 vN~~v~H~~P~~~d~~~~Lk~GDvVkIDlG~~idGY~aD~arTv~vG~~~~~~~t~~~~~l~~aa~~A~~aai~~vkP-G 161 (389)
T TIGR00495 83 VNNCVGHFSPLKSDQDYILKEGDVVKIDLGCHIDGFIALVAHTFVVGVAQEEPVTGRKADVIAAAHLAAEAALRLVKP-G 161 (389)
T ss_pred cCCeeeCCCCCCCCCCcCcCCCCEEEEEEEEEECCEEEEEEEEEEECCcccccCCHHHHHHHHHHHHHHHHHHHHhCC-C
Confidence 7889999999532 2378999999999999999999999999999995 4678999999999999999999999 9
Q ss_pred CChHHHHHHHHHHHHHcCCC-CcCCcccccccCCcccc-CCCccccc-C-----CCCccccCCCEEEEcceee
Q 005523 555 TPGFVLDAFARSSLWKIGLD-YRHGTGHGVGAALNVHE-GPQSISFR-Y-----GNMTPLVEGMIVSNEPGYY 619 (692)
Q Consensus 555 ~~~~dv~~~a~~~l~~~G~~-~~h~~GHgIG~~l~~hE-~P~~i~~~-~-----~~~~~L~~GMV~siEPgiy 619 (692)
++++||+.++++++.++|+. +.+.+||||| ...|| .|.++... . +....|++||||+|||.+.
T Consensus 162 ~~~~dI~~ai~~v~~~~G~~~v~~~~gH~ig--r~~~~g~~~Ii~~~~~~~~~~~~~~~le~gev~aIEp~vs 232 (389)
T TIGR00495 162 NTNTQVTEAINKVAHSYGCTPVEGMLSHQLK--QHVIDGEKVIISNPSDSQKKDHDTAEFEENEVYAVDILVS 232 (389)
T ss_pred CcHHHHHHHHHHHHHHcCCeecCCceeeccc--ceeccCCCeeeecCCccccCCCCCCEecCCCEEEEeeeec
Confidence 99999999999999999995 6788999999 77888 77633321 1 2467999999999999764
No 32
>PRK08671 methionine aminopeptidase; Provisional
Probab=99.97 E-value=6.6e-30 Score=269.34 Aligned_cols=188 Identities=21% Similarity=0.232 Sum_probs=163.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHhCCCCCCCCceeeeeCCCCccccccCCCCCCc
Q 005523 417 ELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGFLDTSFDTISGSGANGAIIHYKPEPGKCS 496 (692)
Q Consensus 417 EIe~mR~A~~i~~~a~~~~~~~l~~~i~~~~G~TE~eia~~l~~~~~~~~G~~~~~f~~iv~sG~~~a~~h~~p~~~~~~ 496 (692)
+|+.||+|++++..++..+.+.+ ++|+||.||++.++..... .|. +++|+++++.|.+ .+||.|...+++
T Consensus 1 ~i~~~r~A~~I~~~~~~~~~~~i------~pG~se~ei~~~~~~~i~~-~g~-~~afp~~vs~n~~--~~H~~p~~~d~~ 70 (291)
T PRK08671 1 ELEKYLEAGKIASKVREEAAKLI------KPGAKLLDVAEFVENRIRE-LGA-KPAFPCNISINEV--AAHYTPSPGDER 70 (291)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhc------cCCCcHHHHHHHHHHHHHH-cCC-ccCCCCEEeeCCC--ccCCCCCCCCCc
Confidence 58999999999999998887666 9999999999999876543 454 5889998887654 579999754558
Q ss_pred ccCCCCeEEEecceeECCeEeeeEeEEEcCCCCHHHHHHHHHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHcCC-CC
Q 005523 497 VVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGL-DY 575 (692)
Q Consensus 497 ~l~~Gdiv~iD~g~~~~Gy~aD~tRT~~vG~p~~~~~~~~~~v~~a~~~~~~~~~P~G~~~~dv~~~a~~~l~~~G~-~~ 575 (692)
.|++||+|.+|+|++|+||++|++||+++| ++++++++++.+|++++++++|| |++++||++++++.++++|+ .+
T Consensus 71 ~l~~GDvV~iD~G~~~dGY~aD~arT~~vG---~~~~~l~~a~~~a~~aai~~ikp-G~~~~dv~~~i~~vi~~~G~~~~ 146 (291)
T PRK08671 71 VFPEGDVVKLDLGAHVDGYIADTAVTVDLG---GKYEDLVEASEEALEAAIEVVRP-GVSVGEIGRVIEETIRSYGFKPI 146 (291)
T ss_pred ccCCCCEEEEEEeEEECCEEEEEEEEEEeC---hhHHHHHHHHHHHHHHHHHHhcC-CCCHHHHHHHHHHHHHHcCCccc
Confidence 899999999999999999999999999999 47889999999999999999999 99999999999999999999 46
Q ss_pred cCCcccccccCCccccCCCcccccCCCCccccCCCEEEEcceee
Q 005523 576 RHGTGHGVGAALNVHEGPQSISFRYGNMTPLVEGMIVSNEPGYY 619 (692)
Q Consensus 576 ~h~~GHgIG~~l~~hE~P~~i~~~~~~~~~L~~GMV~siEPgiy 619 (692)
.|.+|||||.+ .+||+|.+.....+++.+|++||||+|||.+.
T Consensus 147 ~~~~GHgiG~~-~~he~p~ip~~~~~~~~~le~GmV~aIEp~~t 189 (291)
T PRK08671 147 RNLTGHGLERY-ELHAGPSIPNYDEGGGVKLEEGDVYAIEPFAT 189 (291)
T ss_pred CCCcccCcCCC-cccCCCccCccCCCCCceeCCCCEEEEcceEE
Confidence 78999999932 78999974433455789999999999999753
No 33
>TIGR00501 met_pdase_II methionine aminopeptidase, type II. Methionine aminopeptidase (map) is a cobalt-binding enzyme. Bacterial and organellar examples (type I) differ from eukaroytic and archaeal (type II) examples in lacking a region of approximately 60 amino acids between the 4th and 5th cobalt-binding ligands. The role of this protein in general is to produce the mature amino end of cytosolic proteins by removing the N-terminal methionine. This model describes type II, among which the eukaryotic members typically have an N-terminal extension not present in archaeal members. It can act cotranslationally. The enzyme from rat has been shown to associate with translation initiation factor 2 (IF-2) and may have a role in translational regulation.
Probab=99.97 E-value=4.6e-29 Score=263.11 Aligned_cols=200 Identities=17% Similarity=0.128 Sum_probs=169.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHhCCCCCCCCceeeeeCCCCccccccCCCCC
Q 005523 415 SAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGFLDTSFDTISGSGANGAIIHYKPEPGK 494 (692)
Q Consensus 415 ~~EIe~mR~A~~i~~~a~~~~~~~l~~~i~~~~G~TE~eia~~l~~~~~~~~G~~~~~f~~iv~sG~~~a~~h~~p~~~~ 494 (692)
-+||+.||+|+++++.++..+.+.+ ++|+||.||++.++.... ..|.. ++|+++++ .|...+||.|...+
T Consensus 2 ~~~i~~~r~A~~I~~~~~~~~~~~i------~~G~se~el~~~~e~~~~-~~g~~-~aFp~~vs--~n~~~~H~~p~~~d 71 (295)
T TIGR00501 2 IERAEKWIEAGKIHSKVRREAADRI------VPGVKLLEVAEFVENRIR-ELGAE-PAFPCNIS--INECAAHFTPKAGD 71 (295)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHC------cCCCCHHHHHHHHHHHHH-HcCCC-CCCCccee--cCCEeeCCCCCCCc
Confidence 3789999999999999998887776 999999999999987654 34553 78998876 46677899997545
Q ss_pred CcccCCCCeEEEecceeECCeEeeeEeEEEcCCCCHHHHHHHHHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHcCC-
Q 005523 495 CSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGL- 573 (692)
Q Consensus 495 ~~~l~~Gdiv~iD~g~~~~Gy~aD~tRT~~vG~p~~~~~~~~~~v~~a~~~~~~~~~P~G~~~~dv~~~a~~~l~~~G~- 573 (692)
++.|++||+|.+|+|++++||++|++||+++|+ .++++|+++.+|+++++++++| |++++||++++++++.++|+
T Consensus 72 ~~~l~~GDvV~iD~G~~~dGY~aD~arT~~vG~---~~~~l~~a~~~A~~aai~~~kP-Gv~~~dV~~ai~~vi~~~G~~ 147 (295)
T TIGR00501 72 KTVFKDGDVVKLDLGAHVDGYIADTAITVDLGD---QYDNLVKAAKDALYTAIKEIRA-GVRVGEIGKAIQEVIESYGVK 147 (295)
T ss_pred CccCCCCCEEEEEEeEEECCEEEEEEEEEEeCc---HHHHHHHHHHHHHHHHHHHhcC-CCCHHHHHHHHHHHHHHcCCe
Confidence 578999999999999999999999999999995 3689999999999999999999 99999999999999999999
Q ss_pred CCcCCcccccccCCccccCCCcccccCCCCccccCCCEEEEcceeeecCcceEEEEE
Q 005523 574 DYRHGTGHGVGAALNVHEGPQSISFRYGNMTPLVEGMIVSNEPGYYEDHAFGIRIEN 630 (692)
Q Consensus 574 ~~~h~~GHgIG~~l~~hE~P~~i~~~~~~~~~L~~GMV~siEPgiy~~g~~GiriEd 630 (692)
.+.|.+|||||.+ .+|+++.+....++++.+|++||||+|||. +..|.+.++-++
T Consensus 148 ~i~~~~GHgig~~-~~h~g~~ip~i~~~~~~~le~GmV~aIEP~-~~~G~G~v~~~~ 202 (295)
T TIGR00501 148 PISNLTGHSMAPY-RLHGGKSIPNVKERDTTKLEEGDVVAIEPF-ATDGVGYVTDGG 202 (295)
T ss_pred eecCCCCcceecc-cccCCCccCeecCCCCCEeCCCCEEEEcee-EECCcCeEecCC
Confidence 4789999999953 678876432333457899999999999995 566665554433
No 34
>cd01088 MetAP2 Methionine Aminopeptidase 2. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides.
Probab=99.96 E-value=3.6e-28 Score=256.16 Aligned_cols=195 Identities=18% Similarity=0.150 Sum_probs=166.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHhCCCCCCCCceeeeeCCCCccccccCCCCCCcc
Q 005523 418 LEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGFLDTSFDTISGSGANGAIIHYKPEPGKCSV 497 (692)
Q Consensus 418 Ie~mR~A~~i~~~a~~~~~~~l~~~i~~~~G~TE~eia~~l~~~~~~~~G~~~~~f~~iv~sG~~~a~~h~~p~~~~~~~ 497 (692)
++.||+|++++..++.++.+.+ +||+||.|+++.+++... ..|. +++|++.+ +.|...+||.|+..+++.
T Consensus 1 ~~~~r~Aa~I~~~a~~~~~~~i------~pG~te~ei~~~~~~~i~-~~G~-~~afp~~i--s~n~~~~H~~p~~~d~~~ 70 (291)
T cd01088 1 LEKYREAGEIHRQVRKYAQSLI------KPGMTLLEIAEFVENRIR-ELGA-GPAFPVNL--SINECAAHYTPNAGDDTV 70 (291)
T ss_pred CHHHHHHHHHHHHHHHHHHHHc------cCCCcHHHHHHHHHHHHH-HcCC-CCCCCcee--ccCCEeeCCCCCCCCCcc
Confidence 3689999999999999887766 999999999999987654 3454 57888764 467788999997655689
Q ss_pred cCCCCeEEEecceeECCeEeeeEeEEEcCCCCHHHHHHHHHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHcCCC-Cc
Q 005523 498 VDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLD-YR 576 (692)
Q Consensus 498 l~~Gdiv~iD~g~~~~Gy~aD~tRT~~vG~p~~~~~~~~~~v~~a~~~~~~~~~P~G~~~~dv~~~a~~~l~~~G~~-~~ 576 (692)
|++||+|.+|+|++++||++|++||+++|+ +++++++++++|+++++++++| |++++||++++++.+.+.|+. +.
T Consensus 71 l~~GDvV~iD~G~~~dGY~sD~arT~~vg~---~~~~l~ea~~~A~~~ai~~ikP-G~~~~dV~~ai~~~i~~~G~~~~~ 146 (291)
T cd01088 71 LKEGDVVKLDFGAHVDGYIADSAFTVDFDP---KYDDLLEAAKEALNAAIKEAGP-DVRLGEIGEAIEEVIESYGFKPIR 146 (291)
T ss_pred cCCCCEEEEEEEEEECCEEEEEEEEEecCh---hHHHHHHHHHHHHHHHHHHhcC-CCcHHHHHHHHHHHHHHcCCEEee
Confidence 999999999999999999999999999995 7889999999999999999999 999999999999999999994 67
Q ss_pred CCcccccccCCccccCCCcccccCCCCccccCCCEEEEcceeeecCcceEEE
Q 005523 577 HGTGHGVGAALNVHEGPQSISFRYGNMTPLVEGMIVSNEPGYYEDHAFGIRI 628 (692)
Q Consensus 577 h~~GHgIG~~l~~hE~P~~i~~~~~~~~~L~~GMV~siEPgiy~~g~~Giri 628 (692)
|.+|||||. +.+|++|.+.....+++.+|++||||+|||. +..|.+.++-
T Consensus 147 ~~~GHgig~-~~~h~~~~ip~~~~~~~~~le~gmV~aIEp~-~s~G~G~v~~ 196 (291)
T cd01088 147 NLTGHSIER-YRLHAGKSIPNVKGGEGTRLEEGDVYAIEPF-ATTGKGYVHD 196 (291)
T ss_pred cCCccCccC-ccccCCCccCccCCCCCCEeCCCCEEEEcee-EECCCCeeec
Confidence 899999994 2688887643333447899999999999995 4567666653
No 35
>KOG1189 consensus Global transcriptional regulator, cell division control protein [Amino acid transport and metabolism]
Probab=99.94 E-value=4.1e-25 Score=242.12 Aligned_cols=345 Identities=20% Similarity=0.259 Sum_probs=256.2
Q ss_pred hhhhcCCCCCCCCCCcceeeEEEEeCCceEEEEeCCCCCHHHHhhh---h---c--CCeE--EEecc----c-HHHHHHH
Q 005523 279 IAWLLNLRGSDVPHSPVMYAYLIVEMDRAKLFVDDSKVTPDVMDHL---K---N--AGVE--LRPYN----S-ILSEIKS 343 (692)
Q Consensus 279 i~YLtGf~g~~~~~~Pv~~a~llvt~~~~~L~vd~~~~~~~~~~~l---~---~--~~v~--i~~y~----~-~~~~l~~ 343 (692)
..||.|+.-.+ ..+++.++..++++...+. ...... . . ..|. +++-. . +...++.
T Consensus 20 ~~WLlGYEfpd--------Tilv~~~~~i~iltSkkKa--~~l~~~~~~~~~~~~~~~v~llvR~k~d~n~~~fdkii~~ 89 (960)
T KOG1189|consen 20 FTWLLGYEFPD--------TILVLCKDKIYILTSKKKA--EFLQKVTNLAQSSEGKPTVNLLVRDKNDDNKGLFDKIIKA 89 (960)
T ss_pred HHHHhccccCc--------eEEEEecCcEEEEecchhH--HHHHhhcccccCcccCcceEEEecccCccccccHHHHHHH
Confidence 57999986444 5677788888888764332 111111 0 0 1122 22111 1 3333333
Q ss_pred HHhcCCeEEEeCC-CCcHHHHHHHHHHHHHhhhhccccccccccccCCCCCCCCCcceecCCccccccccCCHHHHHHHH
Q 005523 344 LAAQGAQLWLDPS-SVNAAIMNTYEIAIEKYLTSNNNKKSKTKMHTDTTGQSGGPAGVFRTSPIAFSKAVKNSAELEGML 422 (692)
Q Consensus 344 l~~~~~~Igvd~~-~~s~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~i~~lR~vKs~~EIe~mR 422 (692)
+...++++|+-.. ..+-.+...-...++ +.+...+|++-.+..+-+||++.||+.+|
T Consensus 90 ik~~gk~vGvf~ke~~~G~F~~~W~~~l~----------------------~~~fn~vDis~~ls~l~avKDd~Ei~~ir 147 (960)
T KOG1189|consen 90 IKSAGKKVGVFAKEKFQGEFMESWNKRLE----------------------AGGFNKVDISLGLSKLFAVKDDEEIANIR 147 (960)
T ss_pred HHhcCCeeeeecccccchhHHHHHHHHhh----------------------hcCCceeehhhhhhhheeeccHHHHHHHH
Confidence 3335788887653 333333333333221 23677899999999999999999999999
Q ss_pred HHHHHHHHHHHHH-HHHHHHHhhcCCCCCHHHHHHHHHHHHHHh---CCC----CCCCCceeeeeCCCCccccccCCCCC
Q 005523 423 NSHLRDAAALAQF-WVWLEEEIHNGAKLTEVDVADKLLEFRSKQ---SGF----LDTSFDTISGSGANGAIIHYKPEPGK 494 (692)
Q Consensus 423 ~A~~i~~~a~~~~-~~~l~~~i~~~~G~TE~eia~~l~~~~~~~---~G~----~~~~f~~iv~sG~~~a~~h~~p~~~~ 494 (692)
.|+.++.+.|..+ ...+.++++....+|..-+...++.++... .|. ...+|+||++||.+..+-...-++
T Consensus 148 ksa~~s~~vm~k~~~~~~~~aiD~ekkvthskLsD~~e~~I~~~k~s~~l~~~~~d~cY~PIiqSGg~ydlk~sa~s~-- 225 (960)
T KOG1189|consen 148 KSAAASSAVMNKYLVDELVEAIDEEKKVTHSKLSDLMESAIEDKKYSPGLDPDLLDMCYPPIIQSGGKYDLKPSAVSD-- 225 (960)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhccchhhhHHHHHHHHHHhhccccCcccCccccccccChhhhcCCccccccccccc--
Confidence 9999999999844 446667776667789998888887653221 121 346899999999988763322222
Q ss_pred CcccCCCCeEEEecceeECCeEeeeEeEEEcCCCCHHHHHHHHHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHcCC-
Q 005523 495 CSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGL- 573 (692)
Q Consensus 495 ~~~l~~Gdiv~iD~g~~~~Gy~aD~tRT~~vG~p~~~~~~~~~~v~~a~~~~~~~~~P~G~~~~dv~~~a~~~l~~~G~- 573 (692)
+..| | +|++.+|++|++||++++||+.+. |+.++.+.|+.++.+|.+++..+|| |++.++||.++.+++.+.+.
T Consensus 226 ~~~L--~-~I~cs~G~RynsYCSNv~RT~Lid-pssemq~nY~fLl~aqe~il~~lrp-G~ki~dVY~~~l~~v~k~~Pe 300 (960)
T KOG1189|consen 226 DNHL--H-VILCSLGIRYNSYCSNVSRTYLID-PSSEMQENYEFLLAAQEEILKLLRP-GTKIGDVYEKALDYVEKNKPE 300 (960)
T ss_pred cccc--c-eEEeeccchhhhhhccccceeeec-chHHHHHHHHHHHHHHHHHHHhhcC-CCchhHHHHHHHHHHHhcCcc
Confidence 2556 4 999999999999999999999997 8999999999999999999999999 99999999999999999887
Q ss_pred ---CCcCCcccccccCCccccCCCcccccCCCCccccCCCEEEEcceeee------cCcceEEEEEEEEEecCCCCCCCC
Q 005523 574 ---DYRHGTGHGVGAALNVHEGPQSISFRYGNMTPLVEGMIVSNEPGYYE------DHAFGIRIENLLYVKEVGTPNRFG 644 (692)
Q Consensus 574 ---~~~h~~GHgIG~~l~~hE~P~~i~~~~~~~~~L~~GMV~siEPgiy~------~g~~GiriEd~vlVte~~~~~~~~ 644 (692)
.+....|.||| |+.+|.-..|+.+ |+.+|++||||.|..|+-. .+.+.+-+.|||+|+++
T Consensus 301 l~~~~~k~lG~~iG--lEFREssl~inaK--nd~~lk~gmvFni~lGf~nl~n~~~~~~yaL~l~DTvlv~e~------- 369 (960)
T KOG1189|consen 301 LVPNFTKNLGFGIG--LEFRESSLVINAK--NDRVLKKGMVFNISLGFSNLTNPESKNSYALLLSDTVLVGED------- 369 (960)
T ss_pred hhhhhhhhcccccc--eeeeccccccccc--chhhhccCcEEEEeeccccccCcccccchhhhccceeeecCC-------
Confidence 36677999999 9999998877755 8999999999999988753 24578899999999999
Q ss_pred CccccCe-eEccCCCCcccchhhccCCHHHHHHHH
Q 005523 645 GVSYLGF-EKLTFVPIQTKLVDLSLLSAAEIDWLN 678 (692)
Q Consensus 645 ~~~~~G~-E~LT~~P~~~~li~~~l~~~~e~~~~n 678 (692)
+. ++||.++....-+.+.+-+++|-.=++
T Consensus 370 -----~p~~vLT~~~K~~~dv~~~f~~eeeE~~~~ 399 (960)
T KOG1189|consen 370 -----PPAEVLTDSAKAVKDVSYFFKDEEEEEELE 399 (960)
T ss_pred -----Ccchhhcccchhhcccceeeccchhhhhhh
Confidence 55 999999988888888877655544333
No 36
>COG5406 Nucleosome binding factor SPN, SPT16 subunit [Transcription / DNA replication, recombination, and repair / Chromatin structure and dynamics]
Probab=99.80 E-value=1.9e-18 Score=186.33 Aligned_cols=247 Identities=14% Similarity=0.141 Sum_probs=191.6
Q ss_pred cceecCCccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHH------HH---hCCC
Q 005523 398 AGVFRTSPIAFSKAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFR------SK---QSGF 468 (692)
Q Consensus 398 ~~vd~~~~i~~lR~vKs~~EIe~mR~A~~i~~~a~~~~~~~l~~~i~~~~G~TE~eia~~l~~~~------~~---~~G~ 468 (692)
..+|++.-+..+-.+|+.+||+.+|.+.+.....|..+.+.++..++..-.+|...+...++... .. ..|-
T Consensus 156 N~~DvslgLsk~~~~KD~~E~an~~~ss~~s~~~M~~~~~em~~~~D~~~kit~~KlsD~mes~iddv~f~q~~s~~l~~ 235 (1001)
T COG5406 156 NASDVSLGLSKMFLTKDAEEIANCRASSAASSVLMRYFVKEMEMLWDGAFKITHGKLSDLMESLIDDVEFFQTKSLKLGD 235 (1001)
T ss_pred chhhhhhhhhHHhccccHHHHhhccccchHHHHHHHHHHHHHHHHHhhhhhhccchHHHHhhhhcchhhhhhhcCccccc
Confidence 46788888899999999999999999999988888877666666664334567666766665421 11 0111
Q ss_pred -----CCCCCceeeeeCCCCcc-ccccCCCCCCcccCCCCeEEEecceeECCeEeeeEeEEEcCCCCHHHHHHHHHHHHH
Q 005523 469 -----LDTSFDTISGSGANGAI-IHYKPEPGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQG 542 (692)
Q Consensus 469 -----~~~~f~~iv~sG~~~a~-~h~~p~~~~~~~l~~Gdiv~iD~g~~~~Gy~aD~tRT~~vG~p~~~~~~~~~~v~~a 542 (692)
..++|.||++||..-.+ |.....+ ..+ -||+|++.+|.+|+|||++++||+++. |+.+|++-|+.++.+
T Consensus 236 ~~~d~lew~ytpiiqsg~~~Dl~psa~s~~---~~l-~gd~vl~s~GiRYn~YCSn~~RT~l~d-p~~e~~~Ny~fl~~l 310 (1001)
T COG5406 236 IDLDQLEWCYTPIIQSGGSIDLTPSAFSFP---MEL-TGDVVLLSIGIRYNGYCSNMSRTILTD-PDSEQQKNYEFLYML 310 (1001)
T ss_pred cchhhhhhhcchhhccCceeecccccccCc---hhh-cCceEEEEeeeeeccccccccceEEeC-CchHhhhhHHHHHHH
Confidence 23678999999976543 2222222 445 588999999999999999999999987 899999999999999
Q ss_pred HHHHHHccCCCCCChHHHHHHHHHHHHHcCC----CCcCCcccccccCCccccCCCcccccCCCCccccCCCEEEEccee
Q 005523 543 HIALDQAIFPQSTPGFVLDAFARSSLWKIGL----DYRHGTGHGVGAALNVHEGPQSISFRYGNMTPLVEGMIVSNEPGY 618 (692)
Q Consensus 543 ~~~~~~~~~P~G~~~~dv~~~a~~~l~~~G~----~~~h~~GHgIG~~l~~hE~P~~i~~~~~~~~~L~~GMV~siEPgi 618 (692)
|......+|| |+..++||..+.+.+.+.|. +|...+|-+|| ++.++.-..++.. ++.+||.||+|.|.-|+
T Consensus 311 Qk~i~~~~rp-G~~~g~iY~~~~~yi~~~~pel~pnF~~nvG~~ig--iefR~s~~~~nvk--n~r~lq~g~~fnis~gf 385 (1001)
T COG5406 311 QKYILGLVRP-GTDSGIIYSEAEKYISSNGPELGPNFIYNVGLMIG--IEFRSSQKPFNVK--NGRVLQAGCIFNISLGF 385 (1001)
T ss_pred HHHHHhhcCC-CCCchhHHHHHHHHHHhcCCccCchHhhhhhhhcc--ccccccccceecc--CCceeccccEEEEeecc
Confidence 9999999999 99999999999999999887 46677899999 9888866545443 77999999999998876
Q ss_pred ee------cCcceEEEEEEEEEecCCCCCCCCCccccCeeEccCCCCcccchhh
Q 005523 619 YE------DHAFGIRIENLLYVKEVGTPNRFGGVSYLGFEKLTFVPIQTKLVDL 666 (692)
Q Consensus 619 y~------~g~~GiriEd~vlVte~~~~~~~~~~~~~G~E~LT~~P~~~~li~~ 666 (692)
-. .+.+...+-||+-|+-+ .+.++|..|+...-|.+
T Consensus 386 ~nl~~~~~~Nnyal~l~dt~qi~ls------------~p~~~t~~~kaq~~isf 427 (1001)
T COG5406 386 GNLINPHPKNNYALLLIDTEQISLS------------NPIVFTDSPKAQGDISF 427 (1001)
T ss_pred cccCCCCcccchhhhhccceEeecC------------CceecccCcccccceeE
Confidence 43 24577888888888877 45666777766655554
No 37
>PRK09795 aminopeptidase; Provisional
Probab=99.70 E-value=5.6e-15 Score=161.14 Aligned_cols=122 Identities=20% Similarity=0.322 Sum_probs=98.6
Q ss_pred HHHHHHHHHhcCCCCCccEEEEcCCCCCcccccccccccceEecCccCCCeEEEEeCCceEEEcCcccHHHHHhhcCCcE
Q 005523 83 EKLRALRELFSRPGVNIDAYIIPSQDAHQSEFIAECYMRRAYISGFTGSAGTAVVTKDKAALWTDGRYFLQAEKQLSSSW 162 (692)
Q Consensus 83 ~Rl~~lr~~m~~~~~~lDa~lI~~~d~h~se~~~~~~~~i~YlTGFtgs~g~~vit~~~~~L~td~ry~~qa~~~~~~~~ 162 (692)
+|+++||++|++ +++||+||+++ .|++|||||+|+.|++||+.++++||||+||.+||+++++. +
T Consensus 2 ~Rl~~l~~~m~~--~~lDa~lI~~~------------~n~~YLTGf~g~~g~llIt~~~~~l~td~ry~~qa~~~~~~-~ 66 (361)
T PRK09795 2 TLLASLRDWLKA--QQLDAVLLSSR------------QNKQPHLGISTGSGYVVISRESAHILVDSRYYADVEARAQG-Y 66 (361)
T ss_pred cHHHHHHHHHHH--CCCCEEEECCc------------cccccccCccCCCeEEEEECCCCEEEcCcchHHHHHhhCCC-c
Confidence 599999999999 99999999998 59999999999999999999999999999999999888864 3
Q ss_pred EEEEcCCCCCCCHHHHHHhhcC--CCCeEEEcCCCCcHHHHHHHHHHHhhCCcEEEEccCcchHHHhh
Q 005523 163 ILMRSGNHGVPTTFEWLNDVLA--PGGRVGIDPFLFSSDAAEELKEAIAKKNHELVYLYDLNLVDVIW 228 (692)
Q Consensus 163 ~~~~~~~~~~~~~~~~l~~~~~--~~~~ig~e~~~~s~~~~~~L~~~l~~~~~~l~~~~~~~lvd~~w 228 (692)
++.... +.+.+.++|.+.+. +.++||||.+.+|+..+++|++.+. ..+++. .++.++
T Consensus 67 ~v~~~~--~~~~~~~~L~~~L~~~~~~~Ig~e~~~~s~~~~~~L~~~l~---~~~~~~----~~~~lR 125 (361)
T PRK09795 67 QLHLLD--ATNTLTTIVNQIIADEQLQTLGFEGQQVSWETAHRWQSELN---AKLVSA----TPDVLR 125 (361)
T ss_pred eEEEec--CCccHHHHHHHHHHhcCCcEEEEecCcccHHHHHHHHHhcC---cccccc----cHHHHh
Confidence 343322 23456678877764 3479999999999999999987652 245443 367765
No 38
>PF01321 Creatinase_N: Creatinase/Prolidase N-terminal domain; InterPro: IPR000587 Creatinase or creatine amidinohydrolase (3.5.3.3 from EC) catalyses the conversion of creatine and water to sarcosine and urea. The enzyme works as a homodimer, and is induced by choline chloride. Each monomer of creatinase has two clearly defined domains, a small N-terminal domain, and a large C-terminal domain. The structure of the C-terminal region represents the "pita-bread" fold. The fold contains both alpha helices and an anti-parallel beta sheet within two structurally similar domains that are thought to be derived from an ancient gene duplication. The active site, where conserved, is located between the two domains. The fold is common to methionine aminopeptidase (3.4.11.18 from EC), aminopeptidase P (3.4.11.9 from EC), prolidase (3.4.13.9 from EC), agropine synthase and creatinase (3.5.3.3 from EC). Though many of these peptidases require a divalent cation, creatinase is not a metal-dependent enzyme [, , ]. ; GO: 0016787 hydrolase activity; PDB: 1PV9_A 3CTZ_A 3IL0_B 3PN9_A 2HOW_A 1WN1_B 3I7M_A 1CHM_B 3QOC_D 1KP0_B ....
Probab=99.58 E-value=3.6e-15 Score=138.21 Aligned_cols=123 Identities=26% Similarity=0.391 Sum_probs=101.6
Q ss_pred HHHHHHHHhcCCCCCccEEEEcCCCCCcccccccccccceEecCc---cCCCeEEE-EeCCceEEEcC-cccHHHHHhh-
Q 005523 84 KLRALRELFSRPGVNIDAYIIPSQDAHQSEFIAECYMRRAYISGF---TGSAGTAV-VTKDKAALWTD-GRYFLQAEKQ- 157 (692)
Q Consensus 84 Rl~~lr~~m~~~~~~lDa~lI~~~d~h~se~~~~~~~~i~YlTGF---tgs~g~~v-it~~~~~L~td-~ry~~qa~~~- 157 (692)
|+++||+.|++ .|+|++||+++ .|++||||| +++.++++ ++.++++||+| ++|..+++..
T Consensus 1 Rl~rl~~~m~~--~gid~lll~~~------------~ni~YltG~~~~~~~~~~~l~i~~~~~~l~~~~~~~~~~~~~~~ 66 (132)
T PF01321_consen 1 RLERLRAAMAE--AGIDALLLTSP------------ENIRYLTGFRWQPGERPVLLVITADGAVLFVPKGEYERAAEESA 66 (132)
T ss_dssp HHHHHHHHHHH--TT-SEEEEESH------------HHHHHHHS--ST-TSSEEEEEEESSSEEEEEEGGGHHHHHHHHT
T ss_pred CHHHHHHHHHH--CCCCEEEEcCh------------hhceEecCCCcCCCcceEEEEecccCcEEEeccccHHHHHHhhc
Confidence 89999999999 99999999998 699999999 88888888 88888899999 7787777776
Q ss_pred cCCcEEEEEcCCCC-CCCHHHHHHhhcCCCCeEEEcCCCCcHHHHHHHHHHHhhCCcEEEEccCcchHHHhh
Q 005523 158 LSSSWILMRSGNHG-VPTTFEWLNDVLAPGGRVGIDPFLFSSDAAEELKEAIAKKNHELVYLYDLNLVDVIW 228 (692)
Q Consensus 158 ~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~ig~e~~~~s~~~~~~L~~~l~~~~~~l~~~~~~~lvd~~w 228 (692)
.. .++... .+ .+++.++|++.+...++||||.+.+|+..|+.|++.+++. +++++ +++|++++
T Consensus 67 ~~--~~v~~~--~~~~~~~~~~l~~~~~~~~~igve~~~~~~~~~~~l~~~~~~~--~~v~~--~~~i~~~R 130 (132)
T PF01321_consen 67 PD--DEVVEY--EDPYEAIAEALKKLGPEGKRIGVEPDSLSAAEYQRLQEALPGA--EFVDA--SPLIEELR 130 (132)
T ss_dssp TS--SEEEEE--STHHHHHHHHHHHHTTTTSEEEEETTTSBHHHHHHHHHHSTTS--EEEEE--HHHHHHHH
T ss_pred CC--ceEEEE--ecccchHHHHHHHhCCCCCEEEEcCCcChHHHHHHHHHhCCCC--EEEEc--HHHHHHcC
Confidence 23 233322 22 4677889998877779999999999999999999999765 99998 99999886
No 39
>PF01321 Creatinase_N: Creatinase/Prolidase N-terminal domain; InterPro: IPR000587 Creatinase or creatine amidinohydrolase (3.5.3.3 from EC) catalyses the conversion of creatine and water to sarcosine and urea. The enzyme works as a homodimer, and is induced by choline chloride. Each monomer of creatinase has two clearly defined domains, a small N-terminal domain, and a large C-terminal domain. The structure of the C-terminal region represents the "pita-bread" fold. The fold contains both alpha helices and an anti-parallel beta sheet within two structurally similar domains that are thought to be derived from an ancient gene duplication. The active site, where conserved, is located between the two domains. The fold is common to methionine aminopeptidase (3.4.11.18 from EC), aminopeptidase P (3.4.11.9 from EC), prolidase (3.4.13.9 from EC), agropine synthase and creatinase (3.5.3.3 from EC). Though many of these peptidases require a divalent cation, creatinase is not a metal-dependent enzyme [, , ]. ; GO: 0016787 hydrolase activity; PDB: 1PV9_A 3CTZ_A 3IL0_B 3PN9_A 2HOW_A 1WN1_B 3I7M_A 1CHM_B 3QOC_D 1KP0_B ....
Probab=99.51 E-value=2.9e-14 Score=132.05 Aligned_cols=128 Identities=23% Similarity=0.377 Sum_probs=95.4
Q ss_pred HHHHHHHHHHHcCCCEEEEcccchhhhhcCCCCCCCCCCcceeeEEEEeCCceEEEEeCCCCCHHHHhhhhcCCeEEEec
Q 005523 255 KLSSLRSDLVDAGSSAIVISMLDEIAWLLNLRGSDVPHSPVMYAYLIVEMDRAKLFVDDSKVTPDVMDHLKNAGVELRPY 334 (692)
Q Consensus 255 Rl~rlr~~m~e~glDallis~~~ni~YLtGf~g~~~~~~Pv~~a~llvt~~~~~L~vd~~~~~~~~~~~l~~~~v~i~~y 334 (692)
|++|+|+.|+++|+|++|+++++|++|||||+... ...| .+++++.++.+||++..++.....+. ....++..|
T Consensus 1 Rl~rl~~~m~~~gid~lll~~~~ni~YltG~~~~~-~~~~---~~l~i~~~~~~l~~~~~~~~~~~~~~--~~~~~v~~~ 74 (132)
T PF01321_consen 1 RLERLRAAMAEAGIDALLLTSPENIRYLTGFRWQP-GERP---VLLVITADGAVLFVPKGEYERAAEES--APDDEVVEY 74 (132)
T ss_dssp HHHHHHHHHHHTT-SEEEEESHHHHHHHHS--ST--TSSE---EEEEEESSSEEEEEEGGGHHHHHHHH--TTSSEEEEE
T ss_pred CHHHHHHHHHHCCCCEEEEcChhhceEecCCCcCC-Ccce---EEEEecccCcEEEeccccHHHHHHhh--cCCceEEEE
Confidence 89999999999999999999999999999996221 1122 33448888779999866555444433 123455655
Q ss_pred cc----HHHHHHHHHhcCCeEEEeCCCCcHHHHHHHHHHHHHhhhhccccccccccccCCCCCCCCCcceecCCcccccc
Q 005523 335 NS----ILSEIKSLAAQGAQLWLDPSSVNAAIMNTYEIAIEKYLTSNNNKKSKTKMHTDTTGQSGGPAGVFRTSPIAFSK 410 (692)
Q Consensus 335 ~~----~~~~l~~l~~~~~~Igvd~~~~s~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~i~~lR 410 (692)
.+ +.+.++++....++||+|.+.+++..++.|++.+ |+.+++|+++++..+|
T Consensus 75 ~~~~~~~~~~l~~~~~~~~~igve~~~~~~~~~~~l~~~~------------------------~~~~~v~~~~~i~~~R 130 (132)
T PF01321_consen 75 EDPYEAIAEALKKLGPEGKRIGVEPDSLSAAEYQRLQEAL------------------------PGAEFVDASPLIEELR 130 (132)
T ss_dssp STHHHHHHHHHHHHTTTTSEEEEETTTSBHHHHHHHHHHS------------------------TTSEEEEEHHHHHHHH
T ss_pred ecccchHHHHHHHhCCCCCEEEEcCCcChHHHHHHHHHhC------------------------CCCEEEEcHHHHHHcC
Confidence 54 4556666655569999999999999999998864 6789999999999999
Q ss_pred cc
Q 005523 411 AV 412 (692)
Q Consensus 411 ~v 412 (692)
+|
T Consensus 131 ~I 132 (132)
T PF01321_consen 131 MI 132 (132)
T ss_dssp TS
T ss_pred cC
Confidence 86
No 40
>TIGR02993 ectoine_eutD ectoine utilization protein EutD. Members of this family are putative peptidases or hydrolases similar to Xaa-Pro aminopeptidase (pfam00557). They belong to ectoine utilization operons, as found in Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. The exact function is unknown.
Probab=99.36 E-value=1.8e-11 Score=134.99 Aligned_cols=131 Identities=16% Similarity=0.220 Sum_probs=95.5
Q ss_pred CCHHHHHHHHHHHhcCCCCCccEEEEcCCCCCcccccccccccceEecCccCCC----eEEEEe-CCceEEEcCcccHHH
Q 005523 79 DAPDEKLRALRELFSRPGVNIDAYIIPSQDAHQSEFIAECYMRRAYISGFTGSA----GTAVVT-KDKAALWTDGRYFLQ 153 (692)
Q Consensus 79 ~~~~~Rl~~lr~~m~~~~~~lDa~lI~~~d~h~se~~~~~~~~i~YlTGFtgs~----g~~vit-~~~~~L~td~ry~~q 153 (692)
..+..|+++||+.|++ +++|++||+++ .|++|||||++.. ..+|++ +++++|+++.++..+
T Consensus 9 ~E~~~Rl~rl~~~m~~--~~lDalli~~~------------~ni~YltG~~~~~~~~~~~l~v~~~~~~~l~~~~~~~~~ 74 (391)
T TIGR02993 9 AEYQARLDKTRAAMEA--RGIDLLIVTDP------------SNMAWLTGYDGWSFYVHQCVLLPPEGEPIWYGRGQDANG 74 (391)
T ss_pred HHHHHHHHHHHHHHHH--cCCCEEEEcCc------------ccceeeccCCCCceEEEEEEEEcCCCceEEEehhhhhhh
Confidence 3466899999999999 99999999998 6999999999864 345555 667889998887777
Q ss_pred HHhhcCCcEEEEEcCCC------CCCCHHHHHHhhcC----CCCeEEEcCCC--CcHHHHHHHHHHHhhCCcEEEEccCc
Q 005523 154 AEKQLSSSWILMRSGNH------GVPTTFEWLNDVLA----PGGRVGIDPFL--FSSDAAEELKEAIAKKNHELVYLYDL 221 (692)
Q Consensus 154 a~~~~~~~~~~~~~~~~------~~~~~~~~l~~~~~----~~~~ig~e~~~--~s~~~~~~L~~~l~~~~~~l~~~~~~ 221 (692)
++.+.... .....++. ..+++++++.+.+. ..++||||.+. +|+..|+.|++.++. ++++++ +
T Consensus 75 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~ig~e~~~~~~~~~~~~~l~~~l~~--~~~~d~--~ 149 (391)
T TIGR02993 75 AKRTAFMD-HDNIVGYPDHYVQSTERHPMDYLSEILQDRGWDSLTIGVEMDNYYFSAAAFASLQKHLPN--ARFVDA--T 149 (391)
T ss_pred Hhheeecc-ccceeecccccccCCCCCHHHHHHHHHHhcCCCCCcEEEecCCCccCHHHHHHHHHhCCC--CEEEeh--H
Confidence 76543100 00011111 11355666665542 23589999875 899999999998864 489998 8
Q ss_pred chHHHhh
Q 005523 222 NLVDVIW 228 (692)
Q Consensus 222 ~lvd~~w 228 (692)
.++++++
T Consensus 150 ~~~~~lR 156 (391)
T TIGR02993 150 ALVNWQR 156 (391)
T ss_pred HHHHHHH
Confidence 9999986
No 41
>KOG2775 consensus Metallopeptidase [General function prediction only]
Probab=99.34 E-value=2.2e-11 Score=122.50 Aligned_cols=186 Identities=17% Similarity=0.194 Sum_probs=143.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHH---HhCC-CCCCCCceeeeeCCCCccccccCCCC
Q 005523 418 LEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRS---KQSG-FLDTSFDTISGSGANGAIIHYKPEPG 493 (692)
Q Consensus 418 Ie~mR~A~~i~~~a~~~~~~~l~~~i~~~~G~TE~eia~~l~~~~~---~~~G-~~~~~f~~iv~sG~~~a~~h~~p~~~ 493 (692)
..-+|+|+ .+++++...+...| +||||-.||...++.... ...| ..+.+||+-++ -|.+-.||.|+.+
T Consensus 85 ~~d~rraA----E~HRqvR~yv~s~i--kPGmtm~ei~e~iEnttR~li~e~gl~aGi~FPtG~S--lN~cAAHyTpNaG 156 (397)
T KOG2775|consen 85 YQDLRRAA----EAHRQVRKYVQSII--KPGMTMIEICETIENTTRKLILENGLNAGIGFPTGCS--LNHCAAHYTPNAG 156 (397)
T ss_pred HHHHHHHH----HHHHHHHHHHHHhc--cCcccHHHHHHHHHHHHHHHHHhccccccccCCCccc--ccchhhhcCCCCC
Confidence 34445554 45555555555555 999999999999985321 1233 23578887655 5677789999988
Q ss_pred CCcccCCCCeEEEecceeECCeEeeeEeEEEcCCCCHHHHHHHHHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHcCC
Q 005523 494 KCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGL 573 (692)
Q Consensus 494 ~~~~l~~Gdiv~iD~g~~~~Gy~aD~tRT~~vG~p~~~~~~~~~~v~~a~~~~~~~~~P~G~~~~dv~~~a~~~l~~~G~ 573 (692)
+..+|+.+|+..||+|.+.+|-..|.+.|+.|.+ ..-.+..++.+|...+++..-- .++.+||.+++++++..+-.
T Consensus 157 d~tVLqydDV~KiDfGthi~GrIiDsAFTv~F~p---~~d~Ll~AvreaT~tGIkeaGi-DvRlcdiG~aiqEVmeSyEv 232 (397)
T KOG2775|consen 157 DKTVLKYDDVMKIDFGTHIDGRIIDSAFTVAFNP---KYDPLLAAVREATNTGIKEAGI-DVRLCDIGEAIQEVMESYEV 232 (397)
T ss_pred CceeeeecceEEEeccccccCeEeeeeeEEeeCc---cccHHHHHHHHHHhhhhhhcCc-eeeehhhhHHHHHHhhheEE
Confidence 8889999999999999999999999999999863 5667888999999999998776 88999999999999998754
Q ss_pred ----------CCcCCcccccccCCccccCCCcccccCCCCccccCCCEEEEcc
Q 005523 574 ----------DYRHGTGHGVGAALNVHEGPQSISFRYGNMTPLVEGMIVSNEP 616 (692)
Q Consensus 574 ----------~~~h~~GHgIG~~l~~hE~P~~i~~~~~~~~~L~~GMV~siEP 616 (692)
....-.||+|+.| .+|-+-.+...+.+..+.+++|.+++||.
T Consensus 233 Ei~Gk~~~VKpIrnLnGHSI~~y-rIH~gksVPiVkgge~trmee~e~yAIET 284 (397)
T KOG2775|consen 233 EINGKTYQVKPIRNLNGHSIAQY-RIHGGKSVPIVKGGEQTRMEEGEIYAIET 284 (397)
T ss_pred EeCCceecceeccccCCCcccce-EeecCcccceecCCcceeecCCeeEEEEe
Confidence 1344579999976 56765432223446899999999999995
No 42
>KOG2776 consensus Metallopeptidase [General function prediction only]
Probab=99.30 E-value=2.8e-10 Score=117.71 Aligned_cols=155 Identities=11% Similarity=0.059 Sum_probs=127.8
Q ss_pred cccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHH---------hCCCCCCCCceeeeeC
Q 005523 410 KAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSK---------QSGFLDTSFDTISGSG 480 (692)
Q Consensus 410 R~vKs~~EIe~mR~A~~i~~~a~~~~~~~l~~~i~~~~G~TE~eia~~l~~~~~~---------~~G~~~~~f~~iv~sG 480 (692)
..+-++.-+-.+|.|+.++..++..+.+.+ .+|.+-.||...-..+.+. +.-..|..|||.++
T Consensus 13 ~tia~~~vvtKYk~AgeI~n~~lk~V~~~~------~~gasv~eiC~~GD~~i~E~t~kiYK~eK~~~KGIAfPT~Is-- 84 (398)
T KOG2776|consen 13 KTIANDSVVTKYKMAGEIVNKVLKSVVELC------QPGASVREICEKGDSLILEETGKIYKKEKDFEKGIAFPTSIS-- 84 (398)
T ss_pred cccccHHHHhhhhhHHHHHHHHHHHHHHHh------cCCchHHHHHHhhhHHHHHHHHHHHhhhhhhhccccccceec--
Confidence 456778889999999999999999888776 8999999998754433221 22234688999877
Q ss_pred CCCccccccCCCCC-CcccCCCCeEEEecceeECCeEeeeEeEEEcCCCC-----HHHHHHHHHHHHHHHHHHHccCCCC
Q 005523 481 ANGAIIHYKPEPGK-CSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPT-----AREKECFTRVLQGHIALDQAIFPQS 554 (692)
Q Consensus 481 ~~~a~~h~~p~~~~-~~~l~~Gdiv~iD~g~~~~Gy~aD~tRT~~vG~p~-----~~~~~~~~~v~~a~~~~~~~~~P~G 554 (692)
.|.+.+|+.|-..+ +-.|++||+|.||+|++++||.+.++.|++||+++ ....++..++..|.+++++.++| |
T Consensus 85 vnncv~h~sPlksd~~~~Lk~GDvVKIdLG~HiDGfiA~vaHT~VV~~~~~~~vtG~kADvI~AAh~A~eaa~rllkp-g 163 (398)
T KOG2776|consen 85 VNNCVCHFSPLKSDADYTLKEGDVVKIDLGVHIDGFIALVAHTIVVGPAPDTPVTGRKADVIAAAHLAAEAALRLLKP-G 163 (398)
T ss_pred ccceeeccCcCCCCCcccccCCCEEEEEeeeeeccceeeeeeeEEeccCCCCcccCchhHHHHHHHHHHHHHHHHhCC-C
Confidence 67888999996433 67899999999999999999999999999998533 55677778888888899999999 9
Q ss_pred CChHHHHHHHHHHHHHcCC
Q 005523 555 TPGFVLDAFARSSLWKIGL 573 (692)
Q Consensus 555 ~~~~dv~~~a~~~l~~~G~ 573 (692)
.+-..|.+++.+.+..+|.
T Consensus 164 n~n~~vT~~i~k~aas~~c 182 (398)
T KOG2776|consen 164 NTNTQVTRAIVKTAASYGC 182 (398)
T ss_pred CCCchhhHHHHHHHHHhCC
Confidence 9999999999998888876
No 43
>PRK14575 putative peptidase; Provisional
Probab=99.11 E-value=1.6e-08 Score=112.07 Aligned_cols=128 Identities=17% Similarity=0.214 Sum_probs=91.8
Q ss_pred HHHHHHHHHhcCCCCCccEEEEcCCCCCcccccccccccceEecCccCCC---------eEEEEeCC-c-eE-EEcCccc
Q 005523 83 EKLRALRELFSRPGVNIDAYIIPSQDAHQSEFIAECYMRRAYISGFTGSA---------GTAVVTKD-K-AA-LWTDGRY 150 (692)
Q Consensus 83 ~Rl~~lr~~m~~~~~~lDa~lI~~~d~h~se~~~~~~~~i~YlTGFtgs~---------g~~vit~~-~-~~-L~td~ry 150 (692)
.-++++|+.|++ +++|+++|+++ .|++|||||.+.. +.+||+.+ + ++ |+++..+
T Consensus 11 ~~~~rlr~~m~~--~glD~lvl~~p------------~n~~ylTG~~~~~~~~~r~~~~~~lvv~~~~~~p~~~i~p~~E 76 (406)
T PRK14575 11 TVSRKLRTIMER--DNIDAVIVTTC------------DNFYHVTGILSFFMYTFRNTGTAIAVVFRDVKIPSLIIMNEFE 76 (406)
T ss_pred HHHHHHHHHHHH--cCCCEEeecCc------------chheeecccccccceecccCCceEEEEEcCCCCCceEEechhh
Confidence 468899999999 99999999999 6999999998753 33567765 3 45 9999999
Q ss_pred HHHHHhhcCC----cEEEEEcCCCCC------------------CCHHHHHHhhc----CCCCeEEEcCCCCcHHHHHHH
Q 005523 151 FLQAEKQLSS----SWILMRSGNHGV------------------PTTFEWLNDVL----APGGRVGIDPFLFSSDAAEEL 204 (692)
Q Consensus 151 ~~qa~~~~~~----~~~~~~~~~~~~------------------~~~~~~l~~~~----~~~~~ig~e~~~~s~~~~~~L 204 (692)
...++.+... .+.......... +...+.+++.+ ..+++||+|.+.++...++.|
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~d~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~igve~~~~~~~~~~~l 156 (406)
T PRK14575 77 AASLTLDMPNAELKTFPVWVDVDDPFNMRDSANNNKERPIGPPIESVCNILKDALNDARVLNKKIAIDLNIMSNGGKRVI 156 (406)
T ss_pred hhhhcccccccccccCCceEeeeccccccchhhhhhcCCCCCCHHHHHHHHHHHHHhcCCcCCEEEEccCCCCHHHHHHH
Confidence 9998865321 111111110001 11112444433 345899999999999999999
Q ss_pred HHHHhhCCcEEEEccCcchHHHhh
Q 005523 205 KEAIAKKNHELVYLYDLNLVDVIW 228 (692)
Q Consensus 205 ~~~l~~~~~~l~~~~~~~lvd~~w 228 (692)
++.++.. +++++ ++++++++
T Consensus 157 ~~~lp~~--~~~d~--~~~l~~lR 176 (406)
T PRK14575 157 DAVMPNV--DFVDS--SSIFNELR 176 (406)
T ss_pred HHhCCCC--eEEEc--HHHHHHHH
Confidence 9888654 89998 99999997
No 44
>PRK14576 putative endopeptidase; Provisional
Probab=98.93 E-value=2.2e-08 Score=110.99 Aligned_cols=127 Identities=19% Similarity=0.257 Sum_probs=86.1
Q ss_pred HHHHHHHHhcCCCCCccEEEEcCCCCCcccccccccccceEecCccCC-------CeEEE--EeCC--ce-EEEcCcccH
Q 005523 84 KLRALRELFSRPGVNIDAYIIPSQDAHQSEFIAECYMRRAYISGFTGS-------AGTAV--VTKD--KA-ALWTDGRYF 151 (692)
Q Consensus 84 Rl~~lr~~m~~~~~~lDa~lI~~~d~h~se~~~~~~~~i~YlTGFtgs-------~g~~v--it~~--~~-~L~td~ry~ 151 (692)
-.+++|+.|++ +++|++|+++| .|++|||||... .++++ ++.+ ++ +++++..+.
T Consensus 12 ~~~r~r~~M~~--~gldalll~~p------------~ni~YlTG~~~~~~~~~r~~~~~v~v~~~d~~~p~~~i~~~~e~ 77 (405)
T PRK14576 12 VSRKARVVMER--EGIDALVVTVC------------DNFYYLTGFASFFMYTFRHTGAAVAIMFRDANIPSQIIMNEFEA 77 (405)
T ss_pred HHHHHHHHHHH--cCCCEEEeccc------------cceeeeccccccceeeeccCCeEEEEecCCCCCCcEEEechhhh
Confidence 45689999999 99999999999 699999999976 13333 3334 34 789998887
Q ss_pred HHHHhhcC-------CcEEEEEcCCCC--------------CCCHHHHHHhhc----CCCCeEEEcCCCCcHHHHHHHHH
Q 005523 152 LQAEKQLS-------SSWILMRSGNHG--------------VPTTFEWLNDVL----APGGRVGIDPFLFSSDAAEELKE 206 (692)
Q Consensus 152 ~qa~~~~~-------~~~~~~~~~~~~--------------~~~~~~~l~~~~----~~~~~ig~e~~~~s~~~~~~L~~ 206 (692)
..++.... ..|.-....... .+.+.+.+++.+ ..++|||+|.+.++...+..|.+
T Consensus 78 ~~~~~~~~~~~~~~~~~~~d~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~rigve~~~~~~~~~~~l~~ 157 (405)
T PRK14576 78 ASTHFDMPNSVLKTFPVWVDVDDPRNPHHHYKKRDRPIGPPVEAVFSLVKNALEDAGVLDKTIAIELQAMSNGGKGVLDK 157 (405)
T ss_pred hhhhccccccccccCCceEeecCCcccchhhhccccCCCCcHHHHHHHHHHHHHHhCCCCCEEEEccCCCCHHHHHHHHh
Confidence 77763311 013221111000 001113333333 34589999999999999999988
Q ss_pred HHhhCCcEEEEccCcchHHHhh
Q 005523 207 AIAKKNHELVYLYDLNLVDVIW 228 (692)
Q Consensus 207 ~l~~~~~~l~~~~~~~lvd~~w 228 (692)
.++. .++++. +.+|++++
T Consensus 158 ~~~~--~~~vd~--~~~l~~lR 175 (405)
T PRK14576 158 VAPG--LKLVDS--TALFNEIR 175 (405)
T ss_pred hCCC--CeEEEc--HHHHHHHH
Confidence 8764 489998 88999886
No 45
>COG0006 PepP Xaa-Pro aminopeptidase [Amino acid transport and metabolism]
Probab=98.86 E-value=3.2e-07 Score=101.20 Aligned_cols=131 Identities=24% Similarity=0.351 Sum_probs=98.2
Q ss_pred CHHHHHHHHHHHhcCCCCCccEEEEcCCCCCcccccccccccceEecCccC--CC--eEEEEe-CCceEEEcCcccHHHH
Q 005523 80 APDEKLRALRELFSRPGVNIDAYIIPSQDAHQSEFIAECYMRRAYISGFTG--SA--GTAVVT-KDKAALWTDGRYFLQA 154 (692)
Q Consensus 80 ~~~~Rl~~lr~~m~~~~~~lDa~lI~~~d~h~se~~~~~~~~i~YlTGFtg--s~--g~~vit-~~~~~L~td~ry~~qa 154 (692)
.+..|+.+++..|.+ +++|+++++++ .|++|+|||+. .. ..++++ +++++|+++++|..++
T Consensus 9 ~~~~rl~~~~~~~~~--~~~~~~~~~~~------------~n~~yltg~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 74 (384)
T COG0006 9 EYRARLARLRELMEE--AGLDALLLTSP------------SNFYYLTGFDAFGFERLQALLVPAEGEPVLFVRGRDEEAA 74 (384)
T ss_pred HHHHHHHHHHHHHHH--cCCcEEEecCC------------CceEEEeCCCCCcccceEEEEEcCCCceEEEEcchhHHHH
Confidence 356799999999999 99999999998 79999999994 33 344444 4469999999999999
Q ss_pred HhhcCC---cEEEEEcCCCCCCCHHHHHHhhc----CCCCeEEEcCCC--CcHHHHHHHHHHHhhCCcEEEEccCcchHH
Q 005523 155 EKQLSS---SWILMRSGNHGVPTTFEWLNDVL----APGGRVGIDPFL--FSSDAAEELKEAIAKKNHELVYLYDLNLVD 225 (692)
Q Consensus 155 ~~~~~~---~~~~~~~~~~~~~~~~~~l~~~~----~~~~~ig~e~~~--~s~~~~~~L~~~l~~~~~~l~~~~~~~lvd 225 (692)
..+..- .+.....+..... +.+.+.+.+ ....++|+|... +++..++.|++.++.. +++++ .++++
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~--~~~~~--~~~i~ 149 (384)
T COG0006 75 KETSWIKLENVEVYEDDEDPAA-PLDLLGALLEELGLAGKRIGIESASIFLTLAAFERLQAALPRA--ELVDA--SDLVD 149 (384)
T ss_pred HhhcccccCceEEEecCCcccc-HHHHHHHHHHhccccccceEEEeccCccCHHHHHHHHhhCCCC--EEecc--HHHHH
Confidence 987642 2334433322111 344444433 235789999986 8999999999998765 89998 99999
Q ss_pred Hhhh
Q 005523 226 VIWK 229 (692)
Q Consensus 226 ~~w~ 229 (692)
.++.
T Consensus 150 ~lR~ 153 (384)
T COG0006 150 RLRL 153 (384)
T ss_pred HHHh
Confidence 9873
No 46
>KOG2413 consensus Xaa-Pro aminopeptidase [Amino acid transport and metabolism]
Probab=98.01 E-value=1.3e-05 Score=88.95 Aligned_cols=106 Identities=16% Similarity=0.268 Sum_probs=87.8
Q ss_pred HHHHHHHHHHHcCCCEEEEcccch------------hhhhcCCCCCCCCCCcceeeEEEEeCCceEEEEeCCCCCHHHHh
Q 005523 255 KLSSLRSDLVDAGSSAIVISMLDE------------IAWLLNLRGSDVPHSPVMYAYLIVEMDRAKLFVDDSKVTPDVMD 322 (692)
Q Consensus 255 Rl~rlr~~m~e~glDallis~~~n------------i~YLtGf~g~~~~~~Pv~~a~llvt~~~~~L~vd~~~~~~~~~~ 322 (692)
++.++++.|++.+++|.|+.+.|. ++|++||.|+. |+++||..++.|||| +||-.++..
T Consensus 11 ~~~~~~~~~~~~~i~aYi~Ps~DaH~sEy~~~~D~R~~flsGFsGsa--------g~Avit~~~a~lwtD-~RY~~QA~~ 81 (606)
T KOG2413|consen 11 ELMRLRELMKSPPIDAYILPSTDAHQSEYIADRDERRAFLSGFSGSA--------GTAVITEEEAALWTD-GRYFQQAEQ 81 (606)
T ss_pred HHHHHHHHhcCCCceEEEccCCchhhhhhhcchhhhhhhhcccCCCc--------ceEEEecCcceEEEc-cHHHHHHHh
Confidence 778999999999999999987653 89999999997 999999999999999 677778888
Q ss_pred hhhcCCeE-EEec---ccHHHHHHHHHhcCCeEEEeCCCCcHHHHHHHHHHH
Q 005523 323 HLKNAGVE-LRPY---NSILSEIKSLAAQGAQLWLDPSSVNAAIMNTYEIAI 370 (692)
Q Consensus 323 ~l~~~~v~-i~~y---~~~~~~l~~l~~~~~~Igvd~~~~s~~~~~~L~~~~ 370 (692)
+++. ..+ .+.. ..+.+.+.+....+++||+|+.-+++..+..+.+.+
T Consensus 82 qld~-~W~l~k~~~~~~~v~~wl~~~l~~~~~vG~Dp~Lis~~~~~~~~~~l 132 (606)
T KOG2413|consen 82 QLDS-NWTLMKMGEDVPTVEEWLAKVLPEGSRVGIDPTLISFDAWKQLEKSL 132 (606)
T ss_pred hhcc-cceeeeccCCCccHHHHHHHhCCCccccccCcceechhHHHhHHHHH
Confidence 8875 333 3333 346677777777789999999999999998887765
No 47
>PLN03158 methionine aminopeptidase; Provisional
Probab=96.92 E-value=0.0057 Score=67.42 Aligned_cols=114 Identities=18% Similarity=0.149 Sum_probs=80.6
Q ss_pred eEeeeEeEEEcCCCC--HHHHHHHHHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHcCCC-Cc---CCcccccccCCc
Q 005523 515 GTTDITRTVHFGEPT--AREKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLD-YR---HGTGHGVGAALN 588 (692)
Q Consensus 515 y~aD~tRT~~vG~p~--~~~~~~~~~v~~a~~~~~~~~~P~G~~~~dv~~~a~~~l~~~G~~-~~---h~~GHgIG~~l~ 588 (692)
..+++.|+..+..|. +.+|++.+.+.++++++.++++| |++-.||++++...+.+.|.. .. ++..-++. ..
T Consensus 127 ~~~~~~~~~~IKsp~EIe~mR~A~~ia~~al~~a~~~irp-GvTe~EI~~~v~~~~~~~Ga~ps~l~y~~fp~svc--ts 203 (396)
T PLN03158 127 PNSDLQHSVEIKTPEQIQRMRETCRIAREVLDAAARAIKP-GVTTDEIDRVVHEATIAAGGYPSPLNYHFFPKSCC--TS 203 (396)
T ss_pred cccccccceeeCCHHHHHHHHHHHHHHHHHHHHHHHHccC-CCCHHHHHHHHHHHHHHcCCccccccccCCCceee--ec
Confidence 356777888887655 56678888888999999999999 999999999999998887642 11 11111111 11
Q ss_pred ccc-CCCcccccCCCCccccCCCEEEEcceeeecCcceEEEEEEEEEec
Q 005523 589 VHE-GPQSISFRYGNMTPLVEGMIVSNEPGYYEDHAFGIRIENLLYVKE 636 (692)
Q Consensus 589 ~hE-~P~~i~~~~~~~~~L~~GMV~siEPgiy~~g~~GiriEd~vlVte 636 (692)
+.+ -+..+ .++.+|++|+++.++.+.+..|. ..-+..|++|.+
T Consensus 204 ~N~~i~Hgi----p~~r~L~~GDiV~iDvg~~~~GY-~aD~tRT~~VG~ 247 (396)
T PLN03158 204 VNEVICHGI----PDARKLEDGDIVNVDVTVYYKGC-HGDLNETFFVGN 247 (396)
T ss_pred ccccccCCC----CCCccCCCCCEEEEEEeEEECCE-EEeEEeEEEcCC
Confidence 122 11101 15789999999999999998775 448899999854
No 48
>cd01086 MetAP1 Methionine Aminopeptidase 1. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and Peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides.
Probab=96.58 E-value=0.018 Score=58.98 Aligned_cols=99 Identities=21% Similarity=0.085 Sum_probs=71.3
Q ss_pred HHHHHHHHHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHcCCC-Cc---CCcccccccCCcccc-CCCcccccCCCCc
Q 005523 530 AREKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLD-YR---HGTGHGVGAALNVHE-GPQSISFRYGNMT 604 (692)
Q Consensus 530 ~~~~~~~~~v~~a~~~~~~~~~P~G~~~~dv~~~a~~~l~~~G~~-~~---h~~GHgIG~~l~~hE-~P~~i~~~~~~~~ 604 (692)
+.+|++.+.+.+++.++.++++| |++..||..+++..+.+.|.. .. +.....+. ..... .|. . ..++.
T Consensus 2 ~~lr~A~~i~~~~~~~~~~~~~p-G~tE~ev~~~~~~~~~~~G~~~~~~~~~~~~~~~~--~~~~~~~~h---~-~~~~~ 74 (238)
T cd01086 2 EGMREAGRIVAEVLDELAKAIKP-GVTTKELDQIAHEFIEEHGAYPAPLGYYGFPKSIC--TSVNEVVCH---G-IPDDR 74 (238)
T ss_pred HHHHHHHHHHHHHHHHHHHHccC-CCCHHHHHHHHHHHHHHcCCCcccccCCCCCccee--cCCCCceeC---C-CCCCc
Confidence 45789999999999999999999 999999999999999998873 11 11111111 11111 111 1 11578
Q ss_pred cccCCCEEEEcceeeecCcceEEEEEEEEEec
Q 005523 605 PLVEGMIVSNEPGYYEDHAFGIRIENLLYVKE 636 (692)
Q Consensus 605 ~L~~GMV~siEPgiy~~g~~GiriEd~vlVte 636 (692)
+|++|+++.++++....| +...++.|++|.+
T Consensus 75 ~l~~Gd~v~id~g~~~~G-Y~ad~~RT~~~G~ 105 (238)
T cd01086 75 VLKDGDIVNIDVGVELDG-YHGDSARTFIVGE 105 (238)
T ss_pred ccCCCCEEEEEEEEEECC-EEEEEEEEEECCC
Confidence 999999999999987665 4568999999864
No 49
>cd01088 MetAP2 Methionine Aminopeptidase 2. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides.
Probab=96.37 E-value=0.029 Score=59.57 Aligned_cols=96 Identities=16% Similarity=0.111 Sum_probs=67.3
Q ss_pred HHHHHHHHHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHcCCCCcCCcccccccCCcccc-CCCcccccCCCCccccC
Q 005523 530 AREKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLDYRHGTGHGVGAALNVHE-GPQSISFRYGNMTPLVE 608 (692)
Q Consensus 530 ~~~~~~~~~v~~a~~~~~~~~~P~G~~~~dv~~~a~~~l~~~G~~~~h~~GHgIG~~l~~hE-~P~~i~~~~~~~~~L~~ 608 (692)
+.++++.+.+.+++.++++.++| |++..||.+.+++.+.+.|......++ +| .++ .+. ..+..+++.+|++
T Consensus 2 ~~~r~Aa~I~~~a~~~~~~~i~p-G~te~ei~~~~~~~i~~~G~~~afp~~--is----~n~~~~H-~~p~~~d~~~l~~ 73 (291)
T cd01088 2 EKYREAGEIHRQVRKYAQSLIKP-GMTLLEIAEFVENRIRELGAGPAFPVN--LS----INECAAH-YTPNAGDDTVLKE 73 (291)
T ss_pred HHHHHHHHHHHHHHHHHHHHccC-CCcHHHHHHHHHHHHHHcCCCCCCCce--ec----cCCEeeC-CCCCCCCCcccCC
Confidence 35788889999999999999999 999999999999999998853222222 22 222 111 1122235689999
Q ss_pred CCEEEEcceeeecCcceEEEEEEEEE
Q 005523 609 GMIVSNEPGYYEDHAFGIRIENLLYV 634 (692)
Q Consensus 609 GMV~siEPgiy~~g~~GiriEd~vlV 634 (692)
|+++.++.|...+| +-.-+.-|+.|
T Consensus 74 GDvV~iD~G~~~dG-Y~sD~arT~~v 98 (291)
T cd01088 74 GDVVKLDFGAHVDG-YIADSAFTVDF 98 (291)
T ss_pred CCEEEEEEEEEECC-EEEEEEEEEec
Confidence 99999999987765 33334444444
No 50
>COG0024 Map Methionine aminopeptidase [Translation, ribosomal structure and biogenesis]
Probab=95.87 E-value=0.045 Score=56.45 Aligned_cols=101 Identities=20% Similarity=0.142 Sum_probs=69.6
Q ss_pred HHHHHHHHHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHcCCC--C--cCCcccccccCCccccCCCcccccCCCCcc
Q 005523 530 AREKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLD--Y--RHGTGHGVGAALNVHEGPQSISFRYGNMTP 605 (692)
Q Consensus 530 ~~~~~~~~~v~~a~~~~~~~~~P~G~~~~dv~~~a~~~l~~~G~~--~--~h~~GHgIG~~l~~hE~P~~i~~~~~~~~~ 605 (692)
+.+|++-+.+.++++.+...++| |++..||+..+++.+.+.|.. + .++..-.+. +.+.|-- ...-|+++.+
T Consensus 12 ek~r~Ag~i~a~~l~~~~~~v~p-Gvtt~Eld~~~~~~i~~~ga~pa~~gy~g~~~~~c--iSvNe~v--~HgiP~d~~v 86 (255)
T COG0024 12 EKMREAGKIAAKALKEVASLVKP-GVTTLELDEIAEEFIREKGAYPAFLGYKGFPFPTC--ISVNEVV--AHGIPGDKKV 86 (255)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCC-CCCHHHHHHHHHHHHHHcCceehhccCcCCCcceE--eehhhee--eecCCCCCcc
Confidence 34566777778888888899999 999999999999999987652 1 122233333 3333321 1111337899
Q ss_pred ccCCCEEEEcceeeecCcceEEEEEEEEEec
Q 005523 606 LVEGMIVSNEPGYYEDHAFGIRIENLLYVKE 636 (692)
Q Consensus 606 L~~GMV~siEPgiy~~g~~GiriEd~vlVte 636 (692)
|++|.++.|..|+..+|..|= ..-|+.|.+
T Consensus 87 lk~GDiv~IDvg~~~dG~~~D-sa~T~~vg~ 116 (255)
T COG0024 87 LKEGDIVKIDVGAHIDGYIGD-TAITFVVGE 116 (255)
T ss_pred cCCCCEEEEEEEEEECCeeee-EEEEEECCC
Confidence 999999999999999876542 334555653
No 51
>PRK05716 methionine aminopeptidase; Validated
Probab=95.79 E-value=0.079 Score=54.75 Aligned_cols=97 Identities=14% Similarity=0.012 Sum_probs=67.7
Q ss_pred HHHHHHHHHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHcCCC--CcCCcccc----cccCCccccCCCcccccCCCC
Q 005523 530 AREKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLD--YRHGTGHG----VGAALNVHEGPQSISFRYGNM 603 (692)
Q Consensus 530 ~~~~~~~~~v~~a~~~~~~~~~P~G~~~~dv~~~a~~~l~~~G~~--~~h~~GHg----IG~~l~~hE~P~~i~~~~~~~ 603 (692)
+.+|++.+.+.+++.++.++++| |++..||..+++..+.+.|.. +.+..++. .| .+ .-.+. . ..++
T Consensus 12 ~~~r~A~~i~~~~~~~a~~~i~p-G~se~ela~~~~~~~~~~G~~~~~~~~~~~~~~~~~g--~~-~~~~h---~-~~~~ 83 (252)
T PRK05716 12 EKMRVAGRLAAEVLDEIEPHVKP-GVTTKELDRIAEEYIRDQGAIPAPLGYHGFPKSICTS--VN-EVVCH---G-IPSD 83 (252)
T ss_pred HHHHHHHHHHHHHHHHHHHHccC-CCCHHHHHHHHHHHHHHCCCEecccCCCCCCcCeEec--cc-ceeec---C-CCCC
Confidence 34567888888899999999999 999999999999999988863 11111111 11 11 00111 1 1256
Q ss_pred ccccCCCEEEEcceeeecCcceEEEEEEEEEe
Q 005523 604 TPLVEGMIVSNEPGYYEDHAFGIRIENLLYVK 635 (692)
Q Consensus 604 ~~L~~GMV~siEPgiy~~g~~GiriEd~vlVt 635 (692)
.+|++||++.+++|.... .+..-+..|+.|.
T Consensus 84 ~~l~~Gd~v~id~g~~~~-gY~~d~~RT~~vG 114 (252)
T PRK05716 84 KVLKEGDIVNIDVTVIKD-GYHGDTSRTFGVG 114 (252)
T ss_pred cccCCCCEEEEEEEEEEC-CEEEEeEEEEECC
Confidence 899999999999998764 4567788888773
No 52
>PRK12896 methionine aminopeptidase; Reviewed
Probab=95.41 E-value=0.11 Score=53.92 Aligned_cols=108 Identities=17% Similarity=0.094 Sum_probs=73.2
Q ss_pred eEeEEEcCCCCH--HHHHHHHHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHcCCC--Cc--CCcc--cccccCCccc
Q 005523 519 ITRTVHFGEPTA--REKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLD--YR--HGTG--HGVGAALNVH 590 (692)
Q Consensus 519 ~tRT~~vG~p~~--~~~~~~~~v~~a~~~~~~~~~P~G~~~~dv~~~a~~~l~~~G~~--~~--h~~G--HgIG~~l~~h 590 (692)
-.|++.+-.+.+ ..|++.+.+.+++.++++.++| |++-.||...++..+.+.|.. +. .... -..| .+ .
T Consensus 4 ~~~~~~vKs~~Ei~~~r~a~~i~~~~~~~~~~~i~p-G~te~el~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~--~n-~ 79 (255)
T PRK12896 4 EGRGMEIKSPRELEKMRKIGRIVATALKEMGKAVEP-GMTTKELDRIAEKRLEEHGAIPSPEGYYGFPGSTCIS--VN-E 79 (255)
T ss_pred cCCceeECCHHHHHHHHHHHHHHHHHHHHHHhhccC-CCCHHHHHHHHHHHHHHCCCEeCcccCCCCCcceEec--CC-C
Confidence 357777765443 5567777777888888999999 999999999999999988863 11 1111 1122 11 1
Q ss_pred cCCCcccccCCCCccccCCCEEEEcceeeecCcceEEEEEEEEEe
Q 005523 591 EGPQSISFRYGNMTPLVEGMIVSNEPGYYEDHAFGIRIENLLYVK 635 (692)
Q Consensus 591 E~P~~i~~~~~~~~~L~~GMV~siEPgiy~~g~~GiriEd~vlVt 635 (692)
..+. ..+ ++.+|++|.++.++.|....| +..-+..|+++.
T Consensus 80 ~~~h---~~p-~~~~l~~Gd~v~iD~g~~~~g-Y~aD~~RT~~vG 119 (255)
T PRK12896 80 EVAH---GIP-GPRVIKDGDLVNIDVSAYLDG-YHGDTGITFAVG 119 (255)
T ss_pred eeEe---cCC-CCccCCCCCEEEEEEeEEECc-EEEeeEEEEECC
Confidence 1111 111 558899999999999987654 566677787774
No 53
>PF05195 AMP_N: Aminopeptidase P, N-terminal domain; InterPro: IPR007865 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This N-terminal domain is associated with N-terminal region of aminopeptidase P (X-Pro aminopeptidase I and II, 3.4.11.9 from EC) and related sequences. It is not found associated with methionyl aminopeptidase 1 (IPR002467 from INTERPRO) or methionyl aminopeptidase 2 (IPR002468 from INTERPRO) families. The domain is structurally very similar [] to the creatinase N-terminal domain (IPR000587 from INTERPRO), however, little or no sequence similarity exists between the two domains. The sequences belong to MEROPS peptidase family M24B, clan MG.; GO: 0004177 aminopeptidase activity, 0030145 manganese ion binding; PDB: 3IG4_B 2OKN_A 2IW2_B 1WBQ_A 2BH3_A 1WLR_A 2V3Z_A 1W2M_B 2BWT_A 2BWW_A ....
Probab=95.33 E-value=0.12 Score=48.17 Aligned_cols=98 Identities=16% Similarity=0.250 Sum_probs=58.0
Q ss_pred cchhHHHHHHHHHHHHHHcCCCEEEEcc----------------cchhhhhcCCCCCCCCCCcceeeEEEE-eC--CceE
Q 005523 248 AGLDVASKLSSLRSDLVDAGSSAIVISM----------------LDEIAWLLNLRGSDVPHSPVMYAYLIV-EM--DRAK 308 (692)
Q Consensus 248 s~~e~~~Rl~rlr~~m~e~glDallis~----------------~~ni~YLtGf~g~~~~~~Pv~~a~llv-t~--~~~~ 308 (692)
+.++|.+|+++|.+.|.+.++ +||.+ ..|+.||||+.-.+ +++++ .. ++.+
T Consensus 2 ~~~~~~~RR~~l~~~l~~~~~--vil~~~~~~~~~~D~~y~FrQ~s~F~YLTG~~ep~--------~~lvl~~~~~~~~~ 71 (134)
T PF05195_consen 2 PAEEYAERRKKLAEKLPDNSI--VILPGGPEKYRSNDIEYPFRQDSNFYYLTGFNEPD--------AVLVLKDGESGKST 71 (134)
T ss_dssp EHHHHHHHHHHHHHHSHSSEE--EEEE----EEEETTEEE-----HHHHHHH---STT---------EEEEEECTTEEEE
T ss_pred CHHHHHHHHHHHHHhcCCCcE--EEEECCCeeeecCCCccccccCCcEEEEeCCCCCC--------EEEEEecCCCCeEE
Confidence 467899999999999998332 23222 24799999987554 66777 32 4789
Q ss_pred EEEeCCCCCHH--------HHhhhhcCCe-EEEecccHHHHHHHHHhcCCeEEEeC
Q 005523 309 LFVDDSKVTPD--------VMDHLKNAGV-ELRPYNSILSEIKSLAAQGAQLWLDP 355 (692)
Q Consensus 309 L~vd~~~~~~~--------~~~~l~~~~v-~i~~y~~~~~~l~~l~~~~~~Igvd~ 355 (692)
||++......+ ..+.....++ ++.+.+++.+.|.++.....++.++.
T Consensus 72 LF~~~~d~~~e~W~G~~~~~e~a~~~~gvd~v~~~~~l~~~l~~~~~~~~~~~~~~ 127 (134)
T PF05195_consen 72 LFVPPKDPDDEIWDGPRPGPEEAKEIYGVDEVYYIDELEEVLSELLKRSRTVYYDL 127 (134)
T ss_dssp EEE----CCGHHCCSS--HHHHHHHHHT-SEEEEGGGHHHHHHHHHTTTSCEEE-T
T ss_pred EEeCCCCcCccEECccCCCHHHHHHHhCCCEEEEHHHHHHHHHHHHcCCCEEEEEC
Confidence 99964332211 1122222455 67888889999988876666677664
No 54
>KOG2738 consensus Putative methionine aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=94.47 E-value=0.16 Score=52.60 Aligned_cols=97 Identities=15% Similarity=0.166 Sum_probs=68.8
Q ss_pred HHHHHHHHHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHcCCC--------CcCCcccccccCCccccCCCcccccCC
Q 005523 530 AREKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLD--------YRHGTGHGVGAALNVHEGPQSISFRYG 601 (692)
Q Consensus 530 ~~~~~~~~~v~~a~~~~~~~~~P~G~~~~dv~~~a~~~l~~~G~~--------~~h~~GHgIG~~l~~hE~P~~i~~~~~ 601 (692)
+.+|++...+.+.++.+..+++| |+|..|||.++..+.-++|.+ |+..+=- .+.|- |-....
T Consensus 123 e~mR~ac~LarevLd~Aa~~v~P-gvTTdEiD~~VH~a~Ierg~YPSPLnYy~FPKS~CT------SVNEv---iCHGIP 192 (369)
T KOG2738|consen 123 EGMRKACRLAREVLDYAATLVRP-GVTTDEIDRAVHNAIIERGAYPSPLNYYGFPKSVCT------SVNEV---ICHGIP 192 (369)
T ss_pred HHHHHHHHHHHHHHHHHhhhcCC-CccHHHHHHHHHHHHHhcCCcCCCcccCCCchhhhc------chhhe---eecCCC
Confidence 45577777888999999999999 999999999999988887742 2222211 22221 100011
Q ss_pred CCccccCCCEEEEcceeeecCcceEEEEEEEEEecC
Q 005523 602 NMTPLVEGMIVSNEPGYYEDHAFGIRIENLLYVKEV 637 (692)
Q Consensus 602 ~~~~L~~GMV~siEPgiy~~g~~GiriEd~vlVte~ 637 (692)
+.++||.|.++.|...+|..|.-|= +.+|+.|.+-
T Consensus 193 D~RpLedGDIvNiDVtvY~~GyHGD-lneTffvG~V 227 (369)
T KOG2738|consen 193 DSRPLEDGDIVNIDVTVYLNGYHGD-LNETFFVGNV 227 (369)
T ss_pred CcCcCCCCCEEeEEEEEEeccccCc-cccceEeecc
Confidence 6799999999999999998865442 5667777653
No 55
>PRK08671 methionine aminopeptidase; Provisional
Probab=93.01 E-value=1.1 Score=47.42 Aligned_cols=96 Identities=14% Similarity=0.141 Sum_probs=68.4
Q ss_pred HHHHHHHHHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHcCCC--CcCCcccccccCCccccCCCcccccCCCCcccc
Q 005523 530 AREKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLD--YRHGTGHGVGAALNVHEGPQSISFRYGNMTPLV 607 (692)
Q Consensus 530 ~~~~~~~~~v~~a~~~~~~~~~P~G~~~~dv~~~a~~~l~~~G~~--~~h~~GHgIG~~l~~hE~P~~i~~~~~~~~~L~ 607 (692)
+..+++-+.+.++...+.+.++| |++..||...++..+.+.|.. |+..+ ++|.. ..|-.|. ++++.+|+
T Consensus 3 ~~~r~A~~I~~~~~~~~~~~i~p-G~se~ei~~~~~~~i~~~g~~~afp~~v--s~n~~-~~H~~p~-----~~d~~~l~ 73 (291)
T PRK08671 3 EKYLEAGKIASKVREEAAKLIKP-GAKLLDVAEFVENRIRELGAKPAFPCNI--SINEV-AAHYTPS-----PGDERVFP 73 (291)
T ss_pred HHHHHHHHHHHHHHHHHHHhccC-CCcHHHHHHHHHHHHHHcCCccCCCCEE--eeCCC-ccCCCCC-----CCCCcccC
Confidence 35678888888999999999999 999999999999999988753 22111 22210 1232221 23567899
Q ss_pred CCCEEEEcceeeecCcceEEEEEEEEEe
Q 005523 608 EGMIVSNEPGYYEDHAFGIRIENLLYVK 635 (692)
Q Consensus 608 ~GMV~siEPgiy~~g~~GiriEd~vlVt 635 (692)
+|.++.++.|...+| |-.-+..|+++.
T Consensus 74 ~GDvV~iD~G~~~dG-Y~aD~arT~~vG 100 (291)
T PRK08671 74 EGDVVKLDLGAHVDG-YIADTAVTVDLG 100 (291)
T ss_pred CCCEEEEEEeEEECC-EEEEEEEEEEeC
Confidence 999999999987765 455566677663
No 56
>TIGR00501 met_pdase_II methionine aminopeptidase, type II. Methionine aminopeptidase (map) is a cobalt-binding enzyme. Bacterial and organellar examples (type I) differ from eukaroytic and archaeal (type II) examples in lacking a region of approximately 60 amino acids between the 4th and 5th cobalt-binding ligands. The role of this protein in general is to produce the mature amino end of cytosolic proteins by removing the N-terminal methionine. This model describes type II, among which the eukaryotic members typically have an N-terminal extension not present in archaeal members. It can act cotranslationally. The enzyme from rat has been shown to associate with translation initiation factor 2 (IF-2) and may have a role in translational regulation.
Probab=92.95 E-value=1.1 Score=47.75 Aligned_cols=95 Identities=14% Similarity=0.156 Sum_probs=67.8
Q ss_pred HHHHHHHHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHcCCC--CcCCcccccccCCccccCCCcccccCCCCccccC
Q 005523 531 REKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLD--YRHGTGHGVGAALNVHEGPQSISFRYGNMTPLVE 608 (692)
Q Consensus 531 ~~~~~~~~v~~a~~~~~~~~~P~G~~~~dv~~~a~~~l~~~G~~--~~h~~GHgIG~~l~~hE~P~~i~~~~~~~~~L~~ 608 (692)
..+++-+.+.+++..+.+.++| |++..||.+.+...+.+.|.. |+..+ +++. ...|-.|. ++++.+|++
T Consensus 7 ~~r~A~~I~~~~~~~~~~~i~~-G~se~el~~~~e~~~~~~g~~~aFp~~v--s~n~-~~~H~~p~-----~~d~~~l~~ 77 (295)
T TIGR00501 7 KWIEAGKIHSKVRREAADRIVP-GVKLLEVAEFVENRIRELGAEPAFPCNI--SINE-CAAHFTPK-----AGDKTVFKD 77 (295)
T ss_pred HHHHHHHHHHHHHHHHHHHCcC-CCCHHHHHHHHHHHHHHcCCCCCCCcce--ecCC-EeeCCCCC-----CCcCccCCC
Confidence 4667777788888889999999 999999999999999988764 22221 1221 01232332 235678999
Q ss_pred CCEEEEcceeeecCcceEEEEEEEEEe
Q 005523 609 GMIVSNEPGYYEDHAFGIRIENLLYVK 635 (692)
Q Consensus 609 GMV~siEPgiy~~g~~GiriEd~vlVt 635 (692)
|.++.++.|...+| |-.-+..|+.+.
T Consensus 78 GDvV~iD~G~~~dG-Y~aD~arT~~vG 103 (295)
T TIGR00501 78 GDVVKLDLGAHVDG-YIADTAITVDLG 103 (295)
T ss_pred CCEEEEEEeEEECC-EEEEEEEEEEeC
Confidence 99999999988775 455666777763
No 57
>TIGR00495 crvDNA_42K 42K curved DNA binding protein. Proteins identified by this model have been identified in a number of species as a nuclear (but not nucleolar) protein with a cell cycle dependence. Various names given to members of this family have included cell cycle protein p38-2G4, DNA-binding protein GBP16, and proliferation-associated protein 1. This protein is closely related to methionine aminopeptidase, a cobolt-binding protein.
Probab=92.87 E-value=1 Score=49.85 Aligned_cols=103 Identities=14% Similarity=0.038 Sum_probs=66.9
Q ss_pred HHHHHHHHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHcCCC-CcC--CcccccccC--Ccccc-CCCcccccCC-CC
Q 005523 531 REKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLD-YRH--GTGHGVGAA--LNVHE-GPQSISFRYG-NM 603 (692)
Q Consensus 531 ~~~~~~~~v~~a~~~~~~~~~P~G~~~~dv~~~a~~~l~~~G~~-~~h--~~GHgIG~~--l~~hE-~P~~i~~~~~-~~ 603 (692)
..+++-+.+.+++..+++.++| |++..||.+.+.+.+++.+-. |.. ...+|++.. +.+.+ .++ ..+.++ ++
T Consensus 21 ~~r~Aa~Ia~~~l~~~~~~ikp-G~t~~el~~~~~~~i~~~~a~~~~~~~~~~~g~afpt~vSvN~~v~H-~~P~~~d~~ 98 (389)
T TIGR00495 21 KYKMAGEIANNVLKSVVEACSP-GAKVVDICEKGDAFIMEETAKIFKKEKEMEKGIAFPTCISVNNCVGH-FSPLKSDQD 98 (389)
T ss_pred HHHHHHHHHHHHHHHHHHhCCC-CCCHHHHHHHHHHHHHHhhhhhhcccccccCCCCCCeEEecCCeeeC-CCCCCCCCC
Confidence 4456666677788888999999 999999999998888875421 111 111222200 22211 111 111112 34
Q ss_pred ccccCCCEEEEcceeeecCcceEEEEEEEEEec
Q 005523 604 TPLVEGMIVSNEPGYYEDHAFGIRIENLLYVKE 636 (692)
Q Consensus 604 ~~L~~GMV~siEPgiy~~g~~GiriEd~vlVte 636 (692)
.+|++|.++.|..|...+| |..-+..|++|.+
T Consensus 99 ~~Lk~GDvVkIDlG~~idG-Y~aD~arTv~vG~ 130 (389)
T TIGR00495 99 YILKEGDVVKIDLGCHIDG-FIALVAHTFVVGV 130 (389)
T ss_pred cCcCCCCEEEEEEEEEECC-EEEEEEEEEEECC
Confidence 8899999999999998876 5677889999964
No 58
>cd01087 Prolidase Prolidase. E.C. 3.4.13.9. Also known as Xaa-Pro dipeptidase, X-Pro dipeptidase, proline dipeptidase., imidodipeptidase, peptidase D, gamma-peptidase. Catalyses hydrolysis of Xaa-Pro dipeptides; also acts on aminoacyl-hydroxyproline analogs. No action on Pro-Pro.
Probab=91.31 E-value=1.9 Score=44.23 Aligned_cols=94 Identities=17% Similarity=0.106 Sum_probs=67.5
Q ss_pred HHHHHHHHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHcCCCCcCCcccccccCCcccc-CCCcccccCCCCccccCC
Q 005523 531 REKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLDYRHGTGHGVGAALNVHE-GPQSISFRYGNMTPLVEG 609 (692)
Q Consensus 531 ~~~~~~~~v~~a~~~~~~~~~P~G~~~~dv~~~a~~~l~~~G~~~~h~~GHgIG~~l~~hE-~P~~i~~~~~~~~~L~~G 609 (692)
..+++.+.+.++..++.+.++| |++-.||...+...+.+.|.. ...+..|+ ...+. .|. ..+ ++.+|++|
T Consensus 3 ~lr~A~~i~~~~~~~~~~~i~p-G~tE~ei~~~~~~~~~~~G~~--~~~~~~v~--~g~~~~~~H---~~~-~~~~l~~G 73 (243)
T cd01087 3 LMRKACDISAEAHRAAMKASRP-GMSEYELEAEFEYEFRSRGAR--LAYSYIVA--AGSNAAILH---YVH-NDQPLKDG 73 (243)
T ss_pred HHHHHHHHHHHHHHHHHHHCcC-CCcHHHHHHHHHHHHHHcCCC--cCCCCeEE--ECCCccccC---CCc-CCCcCCCC
Confidence 5678888899999999999999 999999999999999998865 11222232 11111 122 111 46789999
Q ss_pred CEEEEcceeeecCcceEEEEEEEEE
Q 005523 610 MIVSNEPGYYEDHAFGIRIENLLYV 634 (692)
Q Consensus 610 MV~siEPgiy~~g~~GiriEd~vlV 634 (692)
.++.++.+....| +-.-+..|+.|
T Consensus 74 d~v~vD~g~~~~G-Y~ad~~Rt~~v 97 (243)
T cd01087 74 DLVLIDAGAEYGG-YASDITRTFPV 97 (243)
T ss_pred CEEEEEeCceECC-EeeeeeEEEEe
Confidence 9999998876553 45567778777
No 59
>cd01092 APP-like Similar to Prolidase and Aminopeptidase P. The members of this subfamily presumably catalyse hydrolysis of Xaa-Pro dipeptides and/or release of any N-terminal amino acid, including proline, that is linked with proline.
Probab=90.98 E-value=2 Score=42.65 Aligned_cols=97 Identities=19% Similarity=0.059 Sum_probs=68.5
Q ss_pred HHHHHHHHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHcCCC-CcCCcccccccCCccccCCCcccccCCCCccccCC
Q 005523 531 REKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLD-YRHGTGHGVGAALNVHEGPQSISFRYGNMTPLVEG 609 (692)
Q Consensus 531 ~~~~~~~~v~~a~~~~~~~~~P~G~~~~dv~~~a~~~l~~~G~~-~~h~~GHgIG~~l~~hE~P~~i~~~~~~~~~L~~G 609 (692)
..|++.+.+.++..++.+.++| |++-.||...++..+.+.|.. +.+.+--+.| .+ ...|. ..+ ++.+|++|
T Consensus 3 ~~r~a~~i~~~~~~~~~~~~~~-G~te~ei~~~~~~~~~~~g~~~~~~~~~v~~g--~~-~~~~h---~~~-~~~~l~~g 74 (208)
T cd01092 3 LLRKAARIADKAFEELLEFIKP-GMTEREVAAELEYFMRKLGAEGPSFDTIVASG--PN-SALPH---GVP-SDRKIEEG 74 (208)
T ss_pred HHHHHHHHHHHHHHHHHHHCcC-CCCHHHHHHHHHHHHHHcCCCCCCCCcEEEEC--cc-ccccC---CCC-CCcCcCCC
Confidence 4678888888899899999999 999999999999999888863 2222222233 11 11122 112 56789999
Q ss_pred CEEEEcceeeecCcceEEEEEEEEEec
Q 005523 610 MIVSNEPGYYEDHAFGIRIENLLYVKE 636 (692)
Q Consensus 610 MV~siEPgiy~~g~~GiriEd~vlVte 636 (692)
.++.++.|.... .+..-+..|++|.+
T Consensus 75 d~v~id~g~~~~-gy~~d~~RT~~~g~ 100 (208)
T cd01092 75 DLVLIDFGAIYD-GYCSDITRTVAVGE 100 (208)
T ss_pred CEEEEEeeeeEC-CEeccceeEEECCC
Confidence 999999887544 34566778888864
No 60
>PF00557 Peptidase_M24: Metallopeptidase family M24 This Prosite entry corresponds to sub-family M24B This Prosite entry corresponds to sub-families M24A and M24C; InterPro: IPR000994 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This entry contains proteins that belong to MEROPS peptidase family M24 (clan MG), which share a common structural-fold, the "pita-bread" fold. The fold contains both alpha helices and an anti-parallel beta sheet within two structurally similar domains that are thought to be derived from an ancient gene duplication. The active site, where conserved, is located between the two domains. The fold is common to methionine aminopeptidase (3.4.11.18 from EC), aminopeptidase P (3.4.11.9 from EC), prolidase (3.4.13.9 from EC), agropine synthase and creatinase (3.5.3.3 from EC). Though many of these peptidases require a divalent cation, creatinase is not a metal-dependent enzyme [, , ]. The entry also contains proteins that have lost catalytic activity, for example Spt16, which is a component of the FACT complex. The crystal structure of the N-terminal domain of Spt16, determined to 2.1A, reveals an aminopeptidase P fold whose enzymatic activity has been lost. This fold binds directly to histones H3-H4 through a interaction with their globular core domains, as well as with their N-terminal tails []. The FACT complex is a stable heterodimer in Saccharomyces cerevisiae (Baker's yeast) comprising Spt16p (P32558 from SWISSPROT, IPR013953 from INTERPRO) and Pob3p (Q04636 from SWISSPROT, IPR000969 from INTERPRO). The complex plays a role in transcription initiation and promotes binding of TATA-binding protein (TBP) to a TATA box in chromatin []; it also facilitates RNA Polymerase II transcription elongation through nucleosomes by destabilising and then reassembling nucleosome structure [, , ]. ; GO: 0009987 cellular process; PDB: 4A6V_B 4A6W_A 3CTZ_A 3IG4_B 2B3H_A 2NQ6_A 2NQ7_A 2GZ5_A 2G6P_A 2B3L_A ....
Probab=90.68 E-value=1.9 Score=42.82 Aligned_cols=94 Identities=19% Similarity=0.147 Sum_probs=65.8
Q ss_pred HHHHHHHHHHHHHHHHHHccCCCCCChHHHHHHHHHH-HHHcCCC-CcCCcccccccCCccccC-CCcccccCCCCcccc
Q 005523 531 REKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSS-LWKIGLD-YRHGTGHGVGAALNVHEG-PQSISFRYGNMTPLV 607 (692)
Q Consensus 531 ~~~~~~~~v~~a~~~~~~~~~P~G~~~~dv~~~a~~~-l~~~G~~-~~h~~GHgIG~~l~~hE~-P~~i~~~~~~~~~L~ 607 (692)
..|++.+.+.++..++++.++| |++-.||.+.+.+. +.+.|.. ..+..-=+.| .+.. |. ..+ ++.+|+
T Consensus 2 ~~R~a~~i~~~~~~~~~~~~~~-G~te~ei~~~~~~~~~~~~g~~~~~~~~~~~~g----~~~~~~~---~~~-~~~~l~ 72 (207)
T PF00557_consen 2 CMRKAARIADAAMEAAMEALRP-GMTEYEIAAAIERAMLRRHGGEEPAFPPIVGSG----PNTDLPH---YTP-TDRRLQ 72 (207)
T ss_dssp HHHHHHHHHHHHHHHHHHHHST-TCBHHHHHHHHHHHHHHHTTTTEESSESEEEEC----CCCGETT---TBC-CSSBES
T ss_pred HHHHHHHHHHHHHHHHHHHccC-CCcHHHHHHHHHHHHHHHcCCCcccCCceEecC----Ccceecc---eec-cceeee
Confidence 5688889999999999999999 99999999999987 6776742 2221111122 1111 22 122 578899
Q ss_pred CCCEEEEcceeeecCcceEEEEEEEEE
Q 005523 608 EGMIVSNEPGYYEDHAFGIRIENLLYV 634 (692)
Q Consensus 608 ~GMV~siEPgiy~~g~~GiriEd~vlV 634 (692)
+|+++.++-+....| +-.-+..|+++
T Consensus 73 ~gd~v~id~~~~~~g-y~~d~~Rt~~~ 98 (207)
T PF00557_consen 73 EGDIVIIDFGPRYDG-YHADIARTFVV 98 (207)
T ss_dssp TTEEEEEEEEEEETT-EEEEEEEEEES
T ss_pred cCCcceeeccceeee-eEeeeeeEEEE
Confidence 999999998876553 45667777765
No 61
>PRK12897 methionine aminopeptidase; Reviewed
Probab=90.26 E-value=3 Score=43.06 Aligned_cols=96 Identities=17% Similarity=0.040 Sum_probs=63.5
Q ss_pred HHHHHHHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHcCCCCc----CCcccccccCCcccc-CCCcccccCCCCccc
Q 005523 532 EKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLDYR----HGTGHGVGAALNVHE-GPQSISFRYGNMTPL 606 (692)
Q Consensus 532 ~~~~~~~v~~a~~~~~~~~~P~G~~~~dv~~~a~~~l~~~G~~~~----h~~GHgIG~~l~~hE-~P~~i~~~~~~~~~L 606 (692)
.|++.+.+.+++.++.+.++| |++-.||...+...+.+.|.... .+....|. ...+. .|. ..+ ++.+|
T Consensus 13 ~r~A~~i~~~~~~~~~~~~~~-G~tE~el~~~~~~~~~~~G~~~~~~~~~~~~~~i~--~g~n~~~~H---~~p-~~~~l 85 (248)
T PRK12897 13 MHESGKLLASCHREIAKIMKP-GITTKEINTFVEAYLEKHGATSEQKGYNGYPYAIC--ASVNDEMCH---AFP-ADVPL 85 (248)
T ss_pred HHHHHHHHHHHHHHHHhhcCC-CCcHHHHHHHHHHHHHHcCCcccccccCCCCcceE--eccCCEeec---CCC-CCccc
Confidence 456666677888888899999 99999999999999999886421 01111121 11111 111 111 56789
Q ss_pred cCCCEEEEcceeeecCcceEEEEEEEEEe
Q 005523 607 VEGMIVSNEPGYYEDHAFGIRIENLLYVK 635 (692)
Q Consensus 607 ~~GMV~siEPgiy~~g~~GiriEd~vlVt 635 (692)
++|.++.++-|.-..| +..-+..|+.|.
T Consensus 86 ~~Gd~V~iD~g~~~~G-Y~sD~tRT~~vG 113 (248)
T PRK12897 86 TEGDIVTIDMVVNLNG-GLSDSAWTYRVG 113 (248)
T ss_pred CCCCEEEEEeeEEECC-EEEEEEEEEEcC
Confidence 9999999998865443 456677787773
No 62
>PTZ00053 methionine aminopeptidase 2; Provisional
Probab=90.12 E-value=3 Score=46.97 Aligned_cols=93 Identities=16% Similarity=0.035 Sum_probs=57.2
Q ss_pred HHHHHHHHHHHHHHHHHccCCCCCChHHHHHHHHHHHH----HcCC----CCcCCcccccccCCccccCCCcccccCCCC
Q 005523 532 EKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLW----KIGL----DYRHGTGHGVGAALNVHEGPQSISFRYGNM 603 (692)
Q Consensus 532 ~~~~~~~v~~a~~~~~~~~~P~G~~~~dv~~~a~~~l~----~~G~----~~~h~~GHgIG~~l~~hE~P~~i~~~~~~~ 603 (692)
.+++-+.+.++...+.+.++| |++..||...+...+. +.|. .|+. +|+ ++ +..|+ ..+.++++
T Consensus 161 ~R~AaeIa~~vl~~~~~~Ikp-G~se~EIa~~ie~~ir~~~~~~G~~~g~aFPt----~vS--~N-~~aaH-~tP~~gd~ 231 (470)
T PTZ00053 161 LRRAAEVHRQVRRYAQSVIKP-GVKLIDICERIESKSRELIEADGLKCGWAFPT----GCS--LN-HCAAH-YTPNTGDK 231 (470)
T ss_pred HHHHHHHHHHHHHHHHHHhhC-CCCHHHHHHHHHHHHHHHHHhcCCcccCCCCc----eee--cC-ccccC-CCCCCCCC
Confidence 344555555666777788999 9999998886665443 3343 2222 233 22 12222 11112357
Q ss_pred ccccCCCEEEEcceeeecCcceEEEEEEEEE
Q 005523 604 TPLVEGMIVSNEPGYYEDHAFGIRIENLLYV 634 (692)
Q Consensus 604 ~~L~~GMV~siEPgiy~~g~~GiriEd~vlV 634 (692)
.+|++|.++.|..|....|. -+-+.-||.+
T Consensus 232 ~vLk~GDvVkID~G~~vdGY-iaD~ArTv~v 261 (470)
T PTZ00053 232 TVLTYDDVCKLDFGTHVNGR-IIDCAFTVAF 261 (470)
T ss_pred cEecCCCeEEEEEeEEECCE-EEeEEEEEEe
Confidence 89999999999999887754 4445666665
No 63
>TIGR00500 met_pdase_I methionine aminopeptidase, type I. Methionine aminopeptidase is a cobalt-binding enzyme. Bacterial and organellar examples (type I) differ from eukaroytic and archaeal (type II) examples in lacking a region of approximately 60 amino acids between the 4th and 5th cobalt-binding ligands. This model describes type I. The role of this protein in general is to produce the mature form of cytosolic proteins by removing the N-terminal methionine.
Probab=89.01 E-value=4.2 Score=41.80 Aligned_cols=95 Identities=17% Similarity=0.070 Sum_probs=63.2
Q ss_pred HHHHHHHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHcCCC-CcC-Ccc----cccccCCccccCCCcccccCCCCcc
Q 005523 532 EKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLD-YRH-GTG----HGVGAALNVHEGPQSISFRYGNMTP 605 (692)
Q Consensus 532 ~~~~~~~v~~a~~~~~~~~~P~G~~~~dv~~~a~~~l~~~G~~-~~h-~~G----HgIG~~l~~hE~P~~i~~~~~~~~~ 605 (692)
.|++.+.+.++..++.+.++| |++-.||...++..+.+.|.. ..+ ..+ .+.| .+ ...|. ..+ ++.+
T Consensus 12 ~r~A~~i~~~~~~~~~~~i~~-G~tE~el~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~--~n-~~~~H---~~~-~~~~ 83 (247)
T TIGR00500 12 IRKAGRLAAEVLEELEREVKP-GVSTKELDRIAKDFIEKHGAKPAFLGYYGFPGSVCIS--VN-EVVIH---GIP-DKKV 83 (247)
T ss_pred HHHHHHHHHHHHHHHHHhccC-CCCHHHHHHHHHHHHHHCCCCccccCCCCCCceeEec--cc-cEEEe---cCC-CCcc
Confidence 355666666777788888999 999999999999999998853 111 111 1122 11 01111 112 5789
Q ss_pred ccCCCEEEEcceeeecCcceEEEEEEEEEe
Q 005523 606 LVEGMIVSNEPGYYEDHAFGIRIENLLYVK 635 (692)
Q Consensus 606 L~~GMV~siEPgiy~~g~~GiriEd~vlVt 635 (692)
|++|.++.++.|.... .+..-+..|++|.
T Consensus 84 l~~Gd~v~iD~g~~~~-gY~aD~~RT~~vG 112 (247)
T TIGR00500 84 LKDGDIVNIDVGVIYD-GYHGDTAKTFLVG 112 (247)
T ss_pred cCCCCEEEEEEEEEEC-CEEEEEEEEEEcC
Confidence 9999999999887544 3566677888774
No 64
>cd01089 PA2G4-like Related to aminopepdidase M, this family contains proliferation-associated protein 2G4. Family members have been implicated in cell cycle control.
Probab=88.15 E-value=5.9 Score=40.28 Aligned_cols=100 Identities=14% Similarity=0.072 Sum_probs=66.8
Q ss_pred HHHHHHHHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHcCCC-CcC--Cccccccc--CCcc-----ccCCCcccccC
Q 005523 531 REKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLD-YRH--GTGHGVGA--ALNV-----HEGPQSISFRY 600 (692)
Q Consensus 531 ~~~~~~~~v~~a~~~~~~~~~P~G~~~~dv~~~a~~~l~~~G~~-~~h--~~GHgIG~--~l~~-----hE~P~~i~~~~ 600 (692)
..|++-+.+.+++.++++.++| |++-.||...+++.+.+..-. +.. ....|++. .+.+ |-.|. . .
T Consensus 3 ~~r~A~~I~~~~~~~~~~~i~p-G~te~ei~~~~e~~i~~~~~~~~~~~~~g~~g~~~~~~v~~n~~~~H~~p~-~---~ 77 (228)
T cd01089 3 KYKTAGQIANKVLKQVISLCVP-GAKVVDLCEKGDKLILEELGKVYKKEKKLEKGIAFPTCISVNNCVCHFSPL-K---S 77 (228)
T ss_pred HHHHHHHHHHHHHHHHHHhccC-CCcHHHHHHHHHHHHHHhhcccccCcccccCCCCcCeEeccCceeecCCCC-C---C
Confidence 5788888999999999999999 999999988877777763221 111 11122220 0111 22221 0 0
Q ss_pred CCCccccCCCEEEEcceeeecCcceEEEEEEEEEec
Q 005523 601 GNMTPLVEGMIVSNEPGYYEDHAFGIRIENLLYVKE 636 (692)
Q Consensus 601 ~~~~~L~~GMV~siEPgiy~~g~~GiriEd~vlVte 636 (692)
.++.+|++|.++.++.|....| +-.-+..|++|.+
T Consensus 78 ~~~~~l~~Gd~v~iD~g~~~~G-Y~sD~tRT~~vG~ 112 (228)
T cd01089 78 DATYTLKDGDVVKIDLGCHIDG-YIAVVAHTIVVGA 112 (228)
T ss_pred CCCcccCCCCEEEEEEEEEECC-EEEEEEEEEEeCC
Confidence 2678899999999999987765 4666788888854
No 65
>PRK07281 methionine aminopeptidase; Reviewed
Probab=88.11 E-value=3.9 Score=43.28 Aligned_cols=80 Identities=15% Similarity=0.059 Sum_probs=54.1
Q ss_pred HHHHHHHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHcCCCCc-CC-cc------cccccCCccc-cCCCcccccCCC
Q 005523 532 EKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLDYR-HG-TG------HGVGAALNVH-EGPQSISFRYGN 602 (692)
Q Consensus 532 ~~~~~~~v~~a~~~~~~~~~P~G~~~~dv~~~a~~~l~~~G~~~~-h~-~G------HgIG~~l~~h-E~P~~i~~~~~~ 602 (692)
.|++-+.+.+++.++.+.++| |++-.||...++..+.+.|.... ++ .| +-++ ...+ .-|. ..+ +
T Consensus 13 mr~A~~i~~~~~~~~~~~i~p-G~te~ei~~~~~~~~~~~g~~~~~~G~~~~~~~f~~~v~--~G~n~~~~H---~~p-~ 85 (286)
T PRK07281 13 MDRAGDFLASIHIGLRDLIKP-GVDMWEVEEYVRRRCKEENVLPLQIGVDGAMMDYPYATC--CGLNDEVAH---AFP-R 85 (286)
T ss_pred HHHHHHHHHHHHHHHHHHCcC-CCcHHHHHHHHHHHHHHcCCcccccCCCCcccCCCcceE--EeccccccC---CCC-C
Confidence 456666777888888899999 99999999999999998875321 11 11 1122 1111 1222 112 5
Q ss_pred CccccCCCEEEEccee
Q 005523 603 MTPLVEGMIVSNEPGY 618 (692)
Q Consensus 603 ~~~L~~GMV~siEPgi 618 (692)
+.+|++|.++.++-|.
T Consensus 86 ~~~l~~Gd~v~iD~g~ 101 (286)
T PRK07281 86 HYILKEGDLLKVDMVL 101 (286)
T ss_pred CcCcCCCCEEEEEecc
Confidence 7899999999999875
No 66
>cd01090 Creatinase Creatine amidinohydrolase. E.C.3.5.3.3. Hydrolyzes creatine to sarcosine and urea.
Probab=88.08 E-value=4.9 Score=40.95 Aligned_cols=96 Identities=14% Similarity=0.053 Sum_probs=65.9
Q ss_pred HHHHHHHHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHcCC---CCcCCccc----ccccCCccccCCCcccccCCCC
Q 005523 531 REKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGL---DYRHGTGH----GVGAALNVHEGPQSISFRYGNM 603 (692)
Q Consensus 531 ~~~~~~~~v~~a~~~~~~~~~P~G~~~~dv~~~a~~~l~~~G~---~~~h~~GH----gIG~~l~~hE~P~~i~~~~~~~ 603 (692)
..|++.+.+.+++.++++.++| |++-.||.+.+...+.+.|- .+.+..+. ..| .+ ...|.. ..++
T Consensus 3 ~ir~Aa~i~d~~~~~~~~~i~p-G~tE~ei~a~~~~~~~~~ga~~~~~~~~~~~~~~v~~G--~~-~~~~H~----~~~~ 74 (228)
T cd01090 3 LIRHGARIADIGGAAVVEAIRE-GVPEYEVALAGTQAMVREIAKTFPEVELMDTWTWFQSG--IN-TDGAHN----PVTN 74 (228)
T ss_pred HHHHHHHHHHHHHHHHHHHhcC-CCCHHHHHHHHHHHHHHcCCccCCcccccCcceEEEee--cc-ccccCC----CCCC
Confidence 4678888888999999999999 99999999999888888763 22211110 123 11 112221 1267
Q ss_pred ccccCCCEEEEcceeeecCcceEEEEEEEEEe
Q 005523 604 TPLVEGMIVSNEPGYYEDHAFGIRIENLLYVK 635 (692)
Q Consensus 604 ~~L~~GMV~siEPgiy~~g~~GiriEd~vlVt 635 (692)
.+|++|.++.++.+....| +..-++-|+.|.
T Consensus 75 r~l~~GD~v~~d~g~~~~G-Y~ad~~RT~~vG 105 (228)
T cd01090 75 RKVQRGDILSLNCFPMIAG-YYTALERTLFLD 105 (228)
T ss_pred cccCCCCEEEEEEeEEECC-EeeeeEEEEECC
Confidence 8999999999998865554 455567777763
No 67
>PRK12318 methionine aminopeptidase; Provisional
Probab=87.97 E-value=5.2 Score=42.44 Aligned_cols=97 Identities=14% Similarity=0.043 Sum_probs=63.3
Q ss_pred HHHHHHHHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHcCCC-----CcC-CcccccccCCcccc-CCCcccccCCCC
Q 005523 531 REKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLD-----YRH-GTGHGVGAALNVHE-GPQSISFRYGNM 603 (692)
Q Consensus 531 ~~~~~~~~v~~a~~~~~~~~~P~G~~~~dv~~~a~~~l~~~G~~-----~~h-~~GHgIG~~l~~hE-~P~~i~~~~~~~ 603 (692)
..|++-..+.+++.+++++++| |++-.||..+++..+.+.|.. +.. +....|. ...++ -+. . ..++
T Consensus 51 ~~R~Aa~I~~~a~~a~~~~irp-G~tE~Eiaa~~~~~~~~~G~~~~~~~~~~~~f~~~v~--~g~n~~~~H---~-~p~~ 123 (291)
T PRK12318 51 KIRKACQVTARILDALCEAAKE-GVTTNELDELSRELHKEYNAIPAPLNYGSPPFPKTIC--TSLNEVICH---G-IPND 123 (291)
T ss_pred HHHHHHHHHHHHHHHHHHhccC-CCCHHHHHHHHHHHHHHcCCCccccccCCCCCCcceE--eeccceeec---C-CCCC
Confidence 3356666667788888999999 999999999888888877742 110 0111121 11111 111 1 1157
Q ss_pred ccccCCCEEEEcceeeecCcceEEEEEEEEEe
Q 005523 604 TPLVEGMIVSNEPGYYEDHAFGIRIENLLYVK 635 (692)
Q Consensus 604 ~~L~~GMV~siEPgiy~~g~~GiriEd~vlVt 635 (692)
.+|++|.++.++.+.... .+..-+.-|++|.
T Consensus 124 ~~l~~GD~V~vD~g~~~~-GY~aDitRT~~vG 154 (291)
T PRK12318 124 IPLKNGDIMNIDVSCIVD-GYYGDCSRMVMIG 154 (291)
T ss_pred CccCCCCEEEEEEeEEEC-cEEEEEEEEEECC
Confidence 899999999999987654 3566778888773
No 68
>cd01066 APP_MetAP A family including aminopeptidase P, aminopeptidase M, and prolidase. Also known as metallopeptidase family M24. This family of enzymes is able to cleave amido-, imido- and amidino-containing bonds. Members exibit relatively narrow substrate specificity compared to other metallo-aminopeptidases, suggesting they play roles in regulation of biological processes rather than general protein degradation.
Probab=87.59 E-value=4.2 Score=39.74 Aligned_cols=97 Identities=20% Similarity=0.120 Sum_probs=68.7
Q ss_pred HHHHHHHHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHcCCCCcCCcccccccCCccccCCCcccccCCCCccccCCC
Q 005523 531 REKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLDYRHGTGHGVGAALNVHEGPQSISFRYGNMTPLVEGM 610 (692)
Q Consensus 531 ~~~~~~~~v~~a~~~~~~~~~P~G~~~~dv~~~a~~~l~~~G~~~~h~~GHgIG~~l~~hE~P~~i~~~~~~~~~L~~GM 610 (692)
..+++-..+.++..++.+.++| |++-.|+...++..+.+.|..+...+-=+.| +......+.+ ++.++++|.
T Consensus 3 ~~r~a~~i~~~~~~~~~~~~~~-G~te~ei~~~~~~~~~~~g~~~~~~~~v~~g------~~~~~~h~~~-~~~~i~~gd 74 (207)
T cd01066 3 RLRKAAEIAEAAMAAAAEAIRP-GVTEAEVAAAIEQALRAAGGYPAGPTIVGSG------ARTALPHYRP-DDRRLQEGD 74 (207)
T ss_pred HHHHHHHHHHHHHHHHHHHCcC-CCCHHHHHHHHHHHHHHcCCCCCCCcEEEEC------ccccCcCCCC-CCCCcCCCC
Confidence 4678888888999999999999 9999999999999999988733222222222 1101111222 467999999
Q ss_pred EEEEcceeeecCcceEEEEEEEEEec
Q 005523 611 IVSNEPGYYEDHAFGIRIENLLYVKE 636 (692)
Q Consensus 611 V~siEPgiy~~g~~GiriEd~vlVte 636 (692)
++.++.+....| +-.-+..|+++.+
T Consensus 75 ~v~~d~g~~~~g-y~~d~~rt~~~g~ 99 (207)
T cd01066 75 LVLVDLGGVYDG-YHADLTRTFVIGE 99 (207)
T ss_pred EEEEEeceeECC-CccceeceeEcCC
Confidence 999998876653 4556777777754
No 69
>PF14826 FACT-Spt16_Nlob: FACT complex subunit SPT16 N-terminal lobe domain; PDB: 3BIQ_A 3BIT_A 3BIP_A 3CB6_A 3CB5_A.
Probab=85.76 E-value=2.3 Score=41.08 Aligned_cols=136 Identities=21% Similarity=0.275 Sum_probs=77.0
Q ss_pred HHHHHHHHHHhcCCC----CCccEEEEcCCC-CCcccccccccccceEecCccCCCeEEEEeCCceEEEcCcc---cHHH
Q 005523 82 DEKLRALRELFSRPG----VNIDAYIIPSQD-AHQSEFIAECYMRRAYISGFTGSAGTAVVTKDKAALWTDGR---YFLQ 153 (692)
Q Consensus 82 ~~Rl~~lr~~m~~~~----~~lDa~lI~~~d-~h~se~~~~~~~~i~YlTGFtgs~g~~vit~~~~~L~td~r---y~~q 153 (692)
..||.+|....+++. .++|+++|.... ..-+.|.-..- =-.||.||.=.+-++|+|+++.+++|-.. +.++
T Consensus 7 ~~RL~~L~~~W~~~~~~~~~~~dal~i~~G~~~e~~~Y~Ks~a-Lq~WLlGYEfpdTiiv~tk~~i~~ltS~KKa~~L~~ 85 (163)
T PF14826_consen 7 HKRLKRLYSSWKEHKDDLWGGADALVIAVGKADEDNPYSKSTA-LQTWLLGYEFPDTIIVFTKKKIHFLTSKKKAKFLEP 85 (163)
T ss_dssp HHHHHHHHHHHHCCCHHTSTT-SEEEEEE-S--TTSTT-HHHH-HHHHHHSS--SSEEEEEETTEEEEEEEHHHHHCCCC
T ss_pred HHHHHHHHHHHhccCccccCCCCEEEEEeCCcccCccchhHHH-HHHHHhcccHhhhhhhhcCCEEEEEeCHHHHHHHHH
Confidence 579999999999832 249999887652 11122211100 12489999988899999999999999744 5555
Q ss_pred HHhhc----CCcEEEEEcCCCCC---CCHHHHHHhhc-CCCCeEEEcC-CCCcHHHHHHHHHHHhhCCcEEEEc
Q 005523 154 AEKQL----SSSWILMRSGNHGV---PTTFEWLNDVL-APGGRVGIDP-FLFSSDAAEELKEAIAKKNHELVYL 218 (692)
Q Consensus 154 a~~~~----~~~~~~~~~~~~~~---~~~~~~l~~~~-~~~~~ig~e~-~~~s~~~~~~L~~~l~~~~~~l~~~ 218 (692)
+++.. ....++......|. ....+-|.+.+ ..+++||+=. +..+=...++..+.+...+.+.+|+
T Consensus 86 l~~~~~~~~~~~v~ll~R~k~d~~~~~~~f~kl~~~ik~~g~~vG~~~Kd~~~G~f~~~w~~~l~~~~~~~vDv 159 (163)
T PF14826_consen 86 LKKPAKEGGSIPVELLVRNKKDPEKNKANFEKLIEAIKKAGKKVGVLAKDKFEGKFVDEWKEALKKSGFEKVDV 159 (163)
T ss_dssp HCCCTTTT-SSEEEEEEE-TT-HHHHHHHHHHHHHHHHCCTSEEEE-TT----SHHHHHHHHHHCHHCSEEEE-
T ss_pred HhhccccCCCceEEEEEeCCCCccchHHHHHHHHHHHHhcCCeEeEecCCCCCCchHHHHHHHHhhcCCceeec
Confidence 55422 11255544432231 11223333333 3678999765 4445566777888888777888887
No 70
>cd01085 APP X-Prolyl Aminopeptidase 2. E.C. 3.4.11.9. Also known as X-Pro aminopeptidase, proline aminopeptidase, aminopeptidase P, and aminoacylproline aminopeptidase. Catalyses release of any N-terminal amino acid, including proline, that is linked with proline, even from a dipeptide or tripeptide.
Probab=80.62 E-value=12 Score=38.12 Aligned_cols=100 Identities=5% Similarity=-0.209 Sum_probs=60.9
Q ss_pred HHHHHHHHHHHHHHHHHHccCCCC--CChHHHHHHHHHHHHHcCCCCcCCcccccccCCcccc-CCCcccccCCCCcccc
Q 005523 531 REKECFTRVLQGHIALDQAIFPQS--TPGFVLDAFARSSLWKIGLDYRHGTGHGVGAALNVHE-GPQSISFRYGNMTPLV 607 (692)
Q Consensus 531 ~~~~~~~~v~~a~~~~~~~~~P~G--~~~~dv~~~a~~~l~~~G~~~~h~~GHgIG~~l~~hE-~P~~i~~~~~~~~~L~ 607 (692)
.+.+.-..+.+++..+.+.++| | ++-.||.+.+.+.+...|-.........|. ...+. .|..+ +.+.++.+|+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~i~~-G~~~tE~eiaa~~~~~~~~~g~~~~~~f~~~v~--~g~n~~~~H~~-p~~~~~r~l~ 80 (224)
T cd01085 5 AHIRDGVALVEFLAWLEQEVPK-GETITELSAADKLEEFRRQQKGYVGLSFDTISG--FGPNGAIVHYS-PTEESNRKIS 80 (224)
T ss_pred HHHHHHHHHHHHHHHHHHHhcc-CCCEeHHHHHHHHHHHHHHcCCCcCCCcceEEE--ecCccCcCCCC-cCcccCcccC
Confidence 3444455556888888899999 9 999999999988776654110001112222 11111 12211 0111378999
Q ss_pred CCCEEEEcceeeecCcceEEEEEEEEEe
Q 005523 608 EGMIVSNEPGYYEDHAFGIRIENLLYVK 635 (692)
Q Consensus 608 ~GMV~siEPgiy~~g~~GiriEd~vlVt 635 (692)
+|.++.++.+....| +-.-+..|++|.
T Consensus 81 ~GD~V~iD~g~~~~g-Y~aD~~RT~~vG 107 (224)
T cd01085 81 PDGLYLIDSGGQYLD-GTTDITRTVHLG 107 (224)
T ss_pred CCCEEEEEeCccCCC-cccccEEeecCC
Confidence 999999999876654 445566777664
No 71
>PF05195 AMP_N: Aminopeptidase P, N-terminal domain; InterPro: IPR007865 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This N-terminal domain is associated with N-terminal region of aminopeptidase P (X-Pro aminopeptidase I and II, 3.4.11.9 from EC) and related sequences. It is not found associated with methionyl aminopeptidase 1 (IPR002467 from INTERPRO) or methionyl aminopeptidase 2 (IPR002468 from INTERPRO) families. The domain is structurally very similar [] to the creatinase N-terminal domain (IPR000587 from INTERPRO), however, little or no sequence similarity exists between the two domains. The sequences belong to MEROPS peptidase family M24B, clan MG.; GO: 0004177 aminopeptidase activity, 0030145 manganese ion binding; PDB: 3IG4_B 2OKN_A 2IW2_B 1WBQ_A 2BH3_A 1WLR_A 2V3Z_A 1W2M_B 2BWT_A 2BWW_A ....
Probab=80.57 E-value=1.4 Score=41.11 Aligned_cols=64 Identities=19% Similarity=0.302 Sum_probs=35.7
Q ss_pred HHHHHHHHHHhcCCCCCccEEEEcCCCCC-c---ccccccccccceEecCccCCCeEEEE-eC--CceEEEcCcc
Q 005523 82 DEKLRALRELFSRPGVNIDAYIIPSQDAH-Q---SEFIAECYMRRAYISGFTGSAGTAVV-TK--DKAALWTDGR 149 (692)
Q Consensus 82 ~~Rl~~lr~~m~~~~~~lDa~lI~~~d~h-~---se~~~~~~~~i~YlTGFtgs~g~~vi-t~--~~~~L~td~r 149 (692)
.+|+++|-+.|.+ .+ ++||++.++. . .+|.=.++.|-+||||+.-.++++|+ .. ++.+||++.+
T Consensus 7 ~~RR~~l~~~l~~--~~--~vil~~~~~~~~~~D~~y~FrQ~s~F~YLTG~~ep~~~lvl~~~~~~~~~LF~~~~ 77 (134)
T PF05195_consen 7 AERRKKLAEKLPD--NS--IVILPGGPEKYRSNDIEYPFRQDSNFYYLTGFNEPDAVLVLKDGESGKSTLFVPPK 77 (134)
T ss_dssp HHHHHHHHHHSHS--SE--EEEEE----EEEETTEEE-----HHHHHHH---STT-EEEEEECTTEEEEEEE---
T ss_pred HHHHHHHHHhcCC--Cc--EEEEECCCeeeecCCCccccccCCcEEEEeCCCCCCEEEEEecCCCCeEEEEeCCC
Confidence 5799999999986 33 5555554332 2 25666777899999999998898888 32 3788998743
No 72
>KOG2775 consensus Metallopeptidase [General function prediction only]
Probab=80.17 E-value=8.9 Score=40.11 Aligned_cols=85 Identities=18% Similarity=0.130 Sum_probs=55.3
Q ss_pred HHHHHHHHHHHHHHHHHHccCCCCCChHHHHH----HHHHHHHHcCCC--CcCCcccccccCCccccCCCcccccCCCCc
Q 005523 531 REKECFTRVLQGHIALDQAIFPQSTPGFVLDA----FARSSLWKIGLD--YRHGTGHGVGAALNVHEGPQSISFRYGNMT 604 (692)
Q Consensus 531 ~~~~~~~~v~~a~~~~~~~~~P~G~~~~dv~~----~a~~~l~~~G~~--~~h~~GHgIG~~l~~hE~P~~i~~~~~~~~ 604 (692)
+.+++.++-+++...+..-++| |++.-||-. ..|..+.+.|+. ..-.+|-++.++ ..|-.|. +|+.+
T Consensus 87 d~rraAE~HRqvR~yv~s~ikP-Gmtm~ei~e~iEnttR~li~e~gl~aGi~FPtG~SlN~c-AAHyTpN-----aGd~t 159 (397)
T KOG2775|consen 87 DLRRAAEAHRQVRKYVQSIIKP-GMTMIEICETIENTTRKLILENGLNAGIGFPTGCSLNHC-AAHYTPN-----AGDKT 159 (397)
T ss_pred HHHHHHHHHHHHHHHHHHhccC-cccHHHHHHHHHHHHHHHHHhccccccccCCCcccccch-hhhcCCC-----CCCce
Confidence 3445555555666677888999 999877654 455666676663 222344444432 2344443 56889
Q ss_pred cccCCCEEEEcceeeecC
Q 005523 605 PLVEGMIVSNEPGYYEDH 622 (692)
Q Consensus 605 ~L~~GMV~siEPgiy~~g 622 (692)
+|+...|+-|.-|...+|
T Consensus 160 VLqydDV~KiDfGthi~G 177 (397)
T KOG2775|consen 160 VLKYDDVMKIDFGTHIDG 177 (397)
T ss_pred eeeecceEEEeccccccC
Confidence 999999999998877654
No 73
>cd01091 CDC68-like Related to aminopeptidase P and aminopeptidase M, a member of this domain family is present in cell division control protein 68, a transcription factor.
Probab=79.13 E-value=16 Score=37.72 Aligned_cols=99 Identities=16% Similarity=0.054 Sum_probs=57.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHhCCC-CCCCCceeeeeCCCCcccccc---CCCCCCc
Q 005523 421 MLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGF-LDTSFDTISGSGANGAIIHYK---PEPGKCS 496 (692)
Q Consensus 421 mR~A~~i~~~a~~~~~~~l~~~i~~~~G~TE~eia~~l~~~~~~~~G~-~~~~f~~iv~sG~~~a~~h~~---p~~~~~~ 496 (692)
.|++......+..++++.+ +||++-.|+.+.+.+...+ .+. ....|...++-|-.-. .|-. .+..+.+
T Consensus 121 ~~~~y~~~~~a~~~~i~~l------kpG~~~~dv~~~a~~~i~~-~~~~~~~~~~~~~GHgiGle-~hE~~~~l~~~~~~ 192 (243)
T cd01091 121 QQKNYNFLLALQEEILKEL------KPGAKLSDVYQKTLDYIKK-KKPELEPNFTKNLGFGIGLE-FRESSLIINAKNDR 192 (243)
T ss_pred HHHHHHHHHHHHHHHHHHc------CCCCcHHHHHHHHHHHHHH-hChhHHHhCcCCcccccCcc-cccCccccCCCCCC
Confidence 4445555555666666655 9999999999988776543 221 1112221222111100 1111 1122347
Q ss_pred ccCCCCeEEEeccee-E----------CCeEeeeEeEEEcCC
Q 005523 497 VVDSKKLFLLDSGAQ-Y----------VDGTTDITRTVHFGE 527 (692)
Q Consensus 497 ~l~~Gdiv~iD~g~~-~----------~Gy~aD~tRT~~vG~ 527 (692)
+|++|-++.+..|.. . ..|..-++-|++|.+
T Consensus 193 ~L~~GMvf~vepGi~~~~~~~~~~~~~~~~gv~ieDtV~Vt~ 234 (243)
T cd01091 193 KLKKGMVFNLSIGFSNLQNPEPKDKESKTYALLLSDTILVTE 234 (243)
T ss_pred CcCCCCEEEEeCCcccccCccccCccCCeeEEEEEEEEEEcC
Confidence 899999999999975 2 246777889998864
No 74
>PRK10879 proline aminopeptidase P II; Provisional
Probab=79.12 E-value=17 Score=40.89 Aligned_cols=92 Identities=14% Similarity=0.113 Sum_probs=63.7
Q ss_pred HHHHHHHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHcCCCCc---CCcccccccCCccccCCCcccccCCCCccccC
Q 005523 532 EKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLDYR---HGTGHGVGAALNVHEGPQSISFRYGNMTPLVE 608 (692)
Q Consensus 532 ~~~~~~~v~~a~~~~~~~~~P~G~~~~dv~~~a~~~l~~~G~~~~---h~~GHgIG~~l~~hE~P~~i~~~~~~~~~L~~ 608 (692)
.+++.+.+.+++.++++.++| |++-.+|.+.+...+.+.|.... .-++-|.-. -.|+ +. .++.+|++
T Consensus 182 ~r~A~~i~~~a~~~~~~~~~p-G~tE~ei~a~~~~~~~~~G~~~~~~~~iv~~G~na-----~~~H---~~-~~~~~l~~ 251 (438)
T PRK10879 182 LRRAGEISALAHTRAMEKCRP-GMFEYQLEGEIHHEFNRHGARYPSYNTIVGSGENG-----CILH---YT-ENESEMRD 251 (438)
T ss_pred HHHHHHHHHHHHHHHHHhcCC-CCcHHHHHHHHHHHHHHCCCCCCCCCcEEEEcCcc-----cccc---CC-CCccccCC
Confidence 345556666788888999999 99999999998888888886432 212222110 0111 11 15678999
Q ss_pred CCEEEEcceeeecCcceEEEEEEEEE
Q 005523 609 GMIVSNEPGYYEDHAFGIRIENLLYV 634 (692)
Q Consensus 609 GMV~siEPgiy~~g~~GiriEd~vlV 634 (692)
|.++.++.|....| +..-+.-|+.|
T Consensus 252 GDlVliD~G~~~~G-Y~sDitRT~~v 276 (438)
T PRK10879 252 GDLVLIDAGCEYKG-YAGDITRTFPV 276 (438)
T ss_pred CCEEEEEeCeEECC-EEEEeEEEEEE
Confidence 99999999876654 56777888877
No 75
>PRK15173 peptidase; Provisional
Probab=70.75 E-value=39 Score=36.34 Aligned_cols=93 Identities=16% Similarity=0.128 Sum_probs=58.9
Q ss_pred HHHHHHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHcCCC-CcCCcccccccCCccccCCCcccccCCCCccccCCCE
Q 005523 533 KECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLD-YRHGTGHGVGAALNVHEGPQSISFRYGNMTPLVEGMI 611 (692)
Q Consensus 533 ~~~~~~v~~a~~~~~~~~~P~G~~~~dv~~~a~~~l~~~G~~-~~h~~GHgIG~~l~~hE~P~~i~~~~~~~~~L~~GMV 611 (692)
+++...+.+++.++.+.++| |++-.||.......+.+.|.. +.-..--..| .+-.|..+ .++..|++|.+
T Consensus 105 r~A~~i~~~~~~~~~~~i~~-G~tE~el~a~~~~~~~~~g~~~~~~~~~i~~G----~~~~~h~~----~~~~~l~~Gd~ 175 (323)
T PRK15173 105 RKSAEITEYGITEASKLIRV-GCTSAELTAAYKAAVMSKSETHFSRFHLISVG----ADFSPKLI----PSNTKACSGDL 175 (323)
T ss_pred HHHHHHHHHHHHHHHHHccC-CCCHHHHHHHHHHHHHHcCCCCCCCCcEEEEC----CCCccCCC----CCCCccCCCCE
Confidence 45555566777778888999 999999999887766665542 2100001122 11112211 15678999999
Q ss_pred EEEcceeeecCcceEEEEEEEEEe
Q 005523 612 VSNEPGYYEDHAFGIRIENLLYVK 635 (692)
Q Consensus 612 ~siEPgiy~~g~~GiriEd~vlVt 635 (692)
+.++.|.... .+..-+..|+.|.
T Consensus 176 V~iD~g~~~~-GY~aDitRT~~vG 198 (323)
T PRK15173 176 IKFDCGVDVD-GYGADIARTFVVG 198 (323)
T ss_pred EEEEeCccCC-CEeeeeEEEEEcC
Confidence 9999876433 3567788888884
No 76
>PF14826 FACT-Spt16_Nlob: FACT complex subunit SPT16 N-terminal lobe domain; PDB: 3BIQ_A 3BIT_A 3BIP_A 3CB6_A 3CB5_A.
Probab=68.68 E-value=14 Score=35.78 Aligned_cols=57 Identities=18% Similarity=0.313 Sum_probs=42.5
Q ss_pred chhHHHHHHHHHHHHHHcC------CCEEEEcccc----h--------hhhhcCCCCCCCCCCcceeeEEEEeCCceEEE
Q 005523 249 GLDVASKLSSLRSDLVDAG------SSAIVISMLD----E--------IAWLLNLRGSDVPHSPVMYAYLIVEMDRAKLF 310 (692)
Q Consensus 249 ~~e~~~Rl~rlr~~m~e~g------lDallis~~~----n--------i~YLtGf~g~~~~~~Pv~~a~llvt~~~~~L~ 310 (692)
...+..|+.+|.+..++.. +|+++|.... + -.||+||.-.+ ..++++++..+++
T Consensus 3 ~~~F~~RL~~L~~~W~~~~~~~~~~~dal~i~~G~~~e~~~Y~Ks~aLq~WLlGYEfpd--------Tiiv~tk~~i~~l 74 (163)
T PF14826_consen 3 KETFHKRLKRLYSSWKEHKDDLWGGADALVIAVGKADEDNPYSKSTALQTWLLGYEFPD--------TIIVFTKKKIHFL 74 (163)
T ss_dssp HHHHHHHHHHHHHHHHCCCHHTSTT-SEEEEEE-S--TTSTT-HHHHHHHHHHSS--SS--------EEEEEETTEEEEE
T ss_pred HHHHHHHHHHHHHHHhccCccccCCCCEEEEEeCCcccCccchhHHHHHHHHhcccHhh--------hhhhhcCCEEEEE
Confidence 4567899999999999885 8999886552 2 57999986544 6788899999999
Q ss_pred EeC
Q 005523 311 VDD 313 (692)
Q Consensus 311 vd~ 313 (692)
+..
T Consensus 75 tS~ 77 (163)
T PF14826_consen 75 TSK 77 (163)
T ss_dssp EEH
T ss_pred eCH
Confidence 863
No 77
>KOG2776 consensus Metallopeptidase [General function prediction only]
Probab=64.96 E-value=41 Score=36.30 Aligned_cols=100 Identities=19% Similarity=0.089 Sum_probs=63.2
Q ss_pred HHHHHHHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHc-CC------CCcCCcc----cccccCCccccCCCcccccC
Q 005523 532 EKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKI-GL------DYRHGTG----HGVGAALNVHEGPQSISFRY 600 (692)
Q Consensus 532 ~~~~~~~v~~a~~~~~~~~~P~G~~~~dv~~~a~~~l~~~-G~------~~~h~~G----HgIG~~l~~hE~P~~i~~~~ 600 (692)
.+.+-+.+-.++..+.+.+.| |++..||-......+.+. |- .+..|+. =+|-- .-.|=.|. .+
T Consensus 24 Yk~AgeI~n~~lk~V~~~~~~-gasv~eiC~~GD~~i~E~t~kiYK~eK~~~KGIAfPT~Isvnn-cv~h~sPl-ks--- 97 (398)
T KOG2776|consen 24 YKMAGEIVNKVLKSVVELCQP-GASVREICEKGDSLILEETGKIYKKEKDFEKGIAFPTSISVNN-CVCHFSPL-KS--- 97 (398)
T ss_pred hhhHHHHHHHHHHHHHHHhcC-CchHHHHHHhhhHHHHHHHHHHHhhhhhhhccccccceecccc-eeeccCcC-CC---
Confidence 455556667777888888999 999998866555443321 21 1111111 11110 01122342 11
Q ss_pred CCCccccCCCEEEEcceeeecCcceEEEEEEEEEecCC
Q 005523 601 GNMTPLVEGMIVSNEPGYYEDHAFGIRIENLLYVKEVG 638 (692)
Q Consensus 601 ~~~~~L~~GMV~siEPgiy~~g~~GiriEd~vlVte~~ 638 (692)
+.+..|++|.|+-|..|..++| |-.-+.+|+||++..
T Consensus 98 d~~~~Lk~GDvVKIdLG~HiDG-fiA~vaHT~VV~~~~ 134 (398)
T KOG2776|consen 98 DADYTLKEGDVVKIDLGVHIDG-FIALVAHTIVVGPAP 134 (398)
T ss_pred CCcccccCCCEEEEEeeeeecc-ceeeeeeeEEeccCC
Confidence 2478999999999999999885 567789999999873
No 78
>KOG2414 consensus Putative Xaa-Pro aminopeptidase [Amino acid transport and metabolism]
Probab=43.22 E-value=49 Score=36.37 Aligned_cols=67 Identities=13% Similarity=0.106 Sum_probs=46.6
Q ss_pred CCHHHHHHHHHHHhcCCCCCccEEEEc-CCCCCcc---cccccccccceEecCccCCCeEEEEeCC-----ceEEEcCcc
Q 005523 79 DAPDEKLRALRELFSRPGVNIDAYIIP-SQDAHQS---EFIAECYMRRAYISGFTGSAGTAVVTKD-----KAALWTDGR 149 (692)
Q Consensus 79 ~~~~~Rl~~lr~~m~~~~~~lDa~lI~-~~d~h~s---e~~~~~~~~i~YlTGFtgs~g~~vit~~-----~~~L~td~r 149 (692)
....+|..+|-+++.+ +. .+||. .|--|+| -|.=.++.|.+||||+.-.++++++.+. ...||.+++
T Consensus 65 ~Ey~~RR~rl~~ll~~--~a--~~il~sap~~~msg~ipY~f~Qd~df~YLtGc~EP~~vl~l~~~d~~s~~~~lf~p~k 140 (488)
T KOG2414|consen 65 TEYKERRSRLMSLLPA--NA--MVILGSAPVKYMSGAIPYTFRQDNDFYYLTGCLEPDAVLLLLKGDERSVAYDLFMPPK 140 (488)
T ss_pred HHHHHHHHHHHHhCCc--cc--EEEEccCchhhhcCccceeeecCCCeEEEeccCCCCeeEEEeecccccceeeEecCCC
Confidence 5567899999999988 43 44444 4444555 3444677899999999999999988532 245666654
No 79
>PF00486 Trans_reg_C: Transcriptional regulatory protein, C terminal; InterPro: IPR001867 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents a domain that is almost always found associated with the response regulator receiver domain (see IPR001789 from INTERPRO). It may play a role in DNA binding [].; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0000160 two-component signal transduction system (phosphorelay), 0006355 regulation of transcription, DNA-dependent; PDB: 2K4J_A 2JPB_A 1ODD_A 1OPC_A 1KGS_A 2PMU_E 2JZY_A 1GXP_B 1QQI_A 2Z33_A ....
Probab=38.45 E-value=43 Score=27.10 Aligned_cols=58 Identities=19% Similarity=0.345 Sum_probs=40.9
Q ss_pred CcHHHHHHHHHHHhhCCcEEEEccCcchHHHhhhhCCCCCCCCccccccccccchhHHHHHHHHHHHHHHcCCC
Q 005523 196 FSSDAAEELKEAIAKKNHELVYLYDLNLVDVIWKESRPKPPNKPIRVHALKYAGLDVASKLSSLRSDLVDAGSS 269 (692)
Q Consensus 196 ~s~~~~~~L~~~l~~~~~~l~~~~~~~lvd~~w~~~rp~~~~~~~~~~~~~fs~~e~~~Rl~rlr~~m~e~glD 269 (692)
+|-.+++-|.-.+... .+.+.- ..+++.+|+++ + ..+...+...+.+||+.|++.+.+
T Consensus 6 Lt~~e~~lL~~L~~~~-~~~vs~--~~l~~~~w~~~-~------------~~~~~~l~~~I~rLR~kL~~~~~~ 63 (77)
T PF00486_consen 6 LTPKEFRLLELLLRNP-GRVVSR--EELIEALWGDE-E------------DVSDNSLDVHISRLRKKLEDAGGD 63 (77)
T ss_dssp SSHHHHHHHHHHHHTT-TSEEEH--HHHHHHHTSSS-S------------TTCTHHHHHHHHHHHHHHHSSTTS
T ss_pred cCHHHHHHHHHHHhCC-CCCCCH--HHhCChhhhcc-c------------ccchhhHHHHHHHHHHHHhhcCCC
Confidence 5666777666555443 357776 89999999621 1 345567888999999999987543
No 80
>PF07385 DUF1498: Protein of unknown function (DUF1498); InterPro: IPR010864 This family consists of several hypothetical bacterial proteins of around 225 residues in length. The function of this family is unknown.; PDB: 3MPB_B 3KMH_A.
Probab=38.41 E-value=22 Score=35.90 Aligned_cols=52 Identities=27% Similarity=0.346 Sum_probs=29.6
Q ss_pred CCCCccccCCCEEEEcceeee---cCcceEEEEEEEEEecCCCCCCCCCccccCeeEccCCC
Q 005523 600 YGNMTPLVEGMIVSNEPGYYE---DHAFGIRIENLLYVKEVGTPNRFGGVSYLGFEKLTFVP 658 (692)
Q Consensus 600 ~~~~~~L~~GMV~siEPgiy~---~g~~GiriEd~vlVte~~~~~~~~~~~~~G~E~LT~~P 658 (692)
++...+|.||.-+|+.|++|. .+.+++-+.+.-.|.+|.+.|.|- +++..+|
T Consensus 152 aG~~l~L~PGESiTL~Pg~yH~Fw~e~g~vLigEVStvNDD~tDN~F~-------~pigRfp 206 (225)
T PF07385_consen 152 AGTQLRLNPGESITLPPGIYHWFWGEGGDVLIGEVSTVNDDNTDNRFL-------EPIGRFP 206 (225)
T ss_dssp TT-EEEE-TT-EEEE-TTEEEEEEE-TTSEEEEEEEE---TTTSEEES-------S---SS-
T ss_pred CCceEEeCCCCeEeeCCCCeeeEEecCCCEEEEeeecccCCCcccccc-------CCcCCCC
Confidence 457889999999999999986 234457788888888886666542 5566666
No 81
>PF14503 YhfZ_C: YhfZ C-terminal domain; PDB: 2OZZ_B.
Probab=36.23 E-value=1.1e+02 Score=31.24 Aligned_cols=33 Identities=39% Similarity=0.440 Sum_probs=19.3
Q ss_pred CCCCeEEEcCCCCcHHHHHHHHHHHhhCCcEEEEc
Q 005523 184 APGGRVGIDPFLFSSDAAEELKEAIAKKNHELVYL 218 (692)
Q Consensus 184 ~~~~~ig~e~~~~s~~~~~~L~~~l~~~~~~l~~~ 218 (692)
..|.|||+|+. |.++..--+..+++.+++++++
T Consensus 112 ~dGmRVGiD~~--S~Dq~~LT~~~~~gk~Ve~Vei 144 (232)
T PF14503_consen 112 EDGMRVGIDPS--SIDQKILTEAEFEGKNVEFVEI 144 (232)
T ss_dssp ----EEEE-TT---HHHHHHHHHHHTTS--EEEE-
T ss_pred eeeeEeecCCC--CccHHHHHHHHhCCCceEEEEe
Confidence 45789999985 7777766677778888889887
No 82
>COG2861 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=35.71 E-value=1e+02 Score=31.59 Aligned_cols=130 Identities=19% Similarity=0.195 Sum_probs=69.6
Q ss_pred CCCcccccCCCCCHHHHHHHHHHHhcCCCCCccEEEEcCCCCCcccccccccccceEecCccCCCeEE------EE---e
Q 005523 68 PSSEFNRNRTQDAPDEKLRALRELFSRPGVNIDAYIIPSQDAHQSEFIAECYMRRAYISGFTGSAGTA------VV---T 138 (692)
Q Consensus 68 ~~~~~~~~~~~~~~~~Rl~~lr~~m~~~~~~lDa~lI~~~d~h~se~~~~~~~~i~YlTGFtgs~g~~------vi---t 138 (692)
|..+..+-...|+..+...+|++.|++ - .+..++.++.||.-+. -+ -
T Consensus 92 ~~~e~gtL~~~~s~~e~~~rl~~a~~~--v----------------------~~~~GlnNhmGs~~tsn~~aM~~~m~~L 147 (250)
T COG2861 92 PKIEPGTLRPGMSAEEILRRLRKAMNK--V----------------------PDAVGLNNHMGSRFTSNEDAMEKLMEAL 147 (250)
T ss_pred CCCCCCCcccCCCHHHHHHHHHHHHhh--C----------------------ccceeehhhhhhhhcCcHHHHHHHHHHH
Confidence 444444434467788899999999998 2 1344555555552111 00 1
Q ss_pred CCceEEEcCcccHHH-----HHhhcCCcEEEEEcCCCCCCCHHHHHHhh------c-CCCCeEEEcC-CCCcHHHHHHHH
Q 005523 139 KDKAALWTDGRYFLQ-----AEKQLSSSWILMRSGNHGVPTTFEWLNDV------L-APGGRVGIDP-FLFSSDAAEELK 205 (692)
Q Consensus 139 ~~~~~L~td~ry~~q-----a~~~~~~~~~~~~~~~~~~~~~~~~l~~~------~-~~~~~ig~e~-~~~s~~~~~~L~ 205 (692)
+.+-.+|.|++-.-+ ..++..-.+.-...-.++..+..+.+++. . ..|..||+=. .--|++..++..
T Consensus 148 k~r~l~flDs~T~a~S~a~~iAk~~gVp~~~rdvfLD~e~~~~~V~kql~~~~~~Ark~G~ai~IGh~~~~Tv~vl~~~~ 227 (250)
T COG2861 148 KERGLYFLDSGTIANSLAGKIAKEIGVPVIKRDVFLDDEDTEAAVLKQLDAAEKLARKNGSAIGIGHPHKNTVAVLQQWL 227 (250)
T ss_pred HHCCeEEEcccccccchhhhhHhhcCCceeeeeeeecCcCCHHHHHHHHHHHHHHHHhcCceEEecCCchhHHHHHHHHH
Confidence 334577778775444 12222111111111112233333333321 1 2566677654 447888888888
Q ss_pred HHHhhCCcEEEEccCcch
Q 005523 206 EAIAKKNHELVYLYDLNL 223 (692)
Q Consensus 206 ~~l~~~~~~l~~~~~~~l 223 (692)
..|+..+++||++ ++|
T Consensus 228 ~~l~~~gIelV~~--s~L 243 (250)
T COG2861 228 DELPARGIELVPV--SAL 243 (250)
T ss_pred HhCCCCCeEEecH--HHh
Confidence 8888778999997 544
No 83
>COG3822 ABC-type sugar transport system, auxiliary component [General function prediction only]
Probab=35.32 E-value=36 Score=33.37 Aligned_cols=43 Identities=23% Similarity=0.341 Sum_probs=31.9
Q ss_pred CCCccccCCCEEEEcceeee---cCcceEEEEEEEEEecCCCCCCC
Q 005523 601 GNMTPLVEGMIVSNEPGYYE---DHAFGIRIENLLYVKEVGTPNRF 643 (692)
Q Consensus 601 ~~~~~L~~GMV~siEPgiy~---~g~~GiriEd~vlVte~~~~~~~ 643 (692)
+....|+||.-+|+-||+|. .+.+++-+.++-.|..|-+.|.|
T Consensus 152 g~~lkL~PGesitL~Pg~~HsFwae~g~vlvgEvSsvndD~hDn~F 197 (225)
T COG3822 152 GSQLKLSPGESITLPPGLYHSFWAEEGGVLVGEVSSVNDDLHDNIF 197 (225)
T ss_pred ceeEEECCCCcEecCCCceeeeeecCCcEEEEEEeeccCccccchh
Confidence 36679999999999999986 34456777777777666555555
No 84
>PRK13607 proline dipeptidase; Provisional
Probab=34.25 E-value=2.3e+02 Score=31.97 Aligned_cols=95 Identities=15% Similarity=0.078 Sum_probs=53.0
Q ss_pred HHHHHHHHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHcCCCCcCCcccccccCCccccCCCcccccCCCCccccCCC
Q 005523 531 REKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLDYRHGTGHGVGAALNVHEGPQSISFRYGNMTPLVEGM 610 (692)
Q Consensus 531 ~~~~~~~~v~~a~~~~~~~~~P~G~~~~dv~~~a~~~l~~~G~~~~h~~GHgIG~~l~~hE~P~~i~~~~~~~~~L~~GM 610 (692)
..+++.+.+.+++.++++.++| |++-.||........ ..|.. ....+.-|+ .+.+- ..+.+.+.+..++++|.
T Consensus 169 ~mr~A~~i~~~a~~~~~~~i~p-G~tE~ei~~~~~~~~-~~~~~-~~~y~~iva--~G~na--a~~H~~~~~~~~~~~Gd 241 (443)
T PRK13607 169 CMREAQKIAVAGHRAAKEAFRA-GMSEFDINLAYLTAT-GQRDN-DVPYGNIVA--LNEHA--AVLHYTKLDHQAPAEMR 241 (443)
T ss_pred HHHHHHHHHHHHHHHHHHHhhc-CCCHHHHHHHHHHHh-CCCCc-CCCCCcEEE--ecCcc--eEecCCccCCCCCCCCC
Confidence 3456666777888899999999 999999986543221 11110 001111122 11110 00111122335789999
Q ss_pred EEEEcceeeecCcceEEEEEEEE
Q 005523 611 IVSNEPGYYEDHAFGIRIENLLY 633 (692)
Q Consensus 611 V~siEPgiy~~g~~GiriEd~vl 633 (692)
++.+.-|....| +..-+..|+.
T Consensus 242 ~vliD~Ga~~~G-Y~sDiTRTf~ 263 (443)
T PRK13607 242 SFLIDAGAEYNG-YAADITRTYA 263 (443)
T ss_pred EEEEEeeEEECC-EEecceEEEe
Confidence 999998865554 5555666665
No 85
>TIGR03241 arg_catab_astB succinylarginine dihydrolase. Members of this family are succinylarginine dihydrolase (EC 3.5.3.23), the second of five enzymes in the arginine succinyltransferase (AST) pathway.
Probab=32.57 E-value=1.4e+02 Score=32.90 Aligned_cols=51 Identities=24% Similarity=0.363 Sum_probs=42.7
Q ss_pred CccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHH
Q 005523 404 SPIAFSKAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVAD 456 (692)
Q Consensus 404 ~~i~~lR~vKs~~EIe~mR~A~~i~~~a~~~~~~~l~~~i~~~~G~TE~eia~ 456 (692)
+..-++|.+-++.|++.+-.+..+++.-+..+-.|+++.- +.-++..|++.
T Consensus 366 PACLRLRVvl~~~E~~Avnp~~lm~~~l~~~L~~wV~~hY--RdrL~~~DLaD 416 (443)
T TIGR03241 366 PACLRLRVVLNDAELAAVNPAVMMNDALFATLNAWVDRHY--RDRLSAADLAD 416 (443)
T ss_pred ceeeeeeeeCCHHHHhhcCcceecCHHHHHHHHHHHHHhc--cccCChhhccC
Confidence 4467899999999999999999999888888888988777 66788888764
No 86
>PRK00865 glutamate racemase; Provisional
Probab=28.08 E-value=1.1e+02 Score=31.77 Aligned_cols=70 Identities=11% Similarity=0.225 Sum_probs=49.1
Q ss_pred CeEE-EcCCCCcHHHHHHHHHHHhhCCcEEEEccCcchHHHhhhhCCCCCCCCccccccccccchhHHHHHHHHHHHHHH
Q 005523 187 GRVG-IDPFLFSSDAAEELKEAIAKKNHELVYLYDLNLVDVIWKESRPKPPNKPIRVHALKYAGLDVASKLSSLRSDLVD 265 (692)
Q Consensus 187 ~~ig-~e~~~~s~~~~~~L~~~l~~~~~~l~~~~~~~lvd~~w~~~rp~~~~~~~~~~~~~fs~~e~~~Rl~rlr~~m~e 265 (692)
..|| ||+..=-+.-++++++.++.. .++.+ .+.-.--+| .-+.++..++..++.+.|.+
T Consensus 6 ~~IgvfDSGiGGLtvl~~i~~~lp~~--~~iY~--~D~~~~PYG----------------~ks~~~i~~~~~~~~~~L~~ 65 (261)
T PRK00865 6 APIGVFDSGVGGLTVLREIRRLLPDE--HIIYV--GDTARFPYG----------------EKSEEEIRERTLEIVEFLLE 65 (261)
T ss_pred CeEEEEECCccHHHHHHHHHHHCCCC--CEEEE--ecCCCCCCC----------------CCCHHHHHHHHHHHHHHHHh
Confidence 4577 898887888899999999875 56665 221111111 12456677888888889999
Q ss_pred cCCCEEEEccc
Q 005523 266 AGSSAIVISML 276 (692)
Q Consensus 266 ~glDallis~~ 276 (692)
.|+|+++|...
T Consensus 66 ~g~d~iVIaCN 76 (261)
T PRK00865 66 YGVKMLVIACN 76 (261)
T ss_pred CCCCEEEEeCc
Confidence 99999888654
No 87
>cd00383 trans_reg_C Effector domain of response regulator. Bacteria and certain eukaryotes like protozoa and higher plants use two-component signal transduction systems to detect and respond to changes in the environment. The system consists of a sensor histidine kinase and a response regulator. The former autophosphorylates in a histidine residue on detecting an external stimulus. The phosphate is then transferred to an invariant aspartate residue in a highly conserved receiver domain of the response regulator. Phosphorylation activates a variable effector domain of the response regulator, which triggers the cellular response. The C-terminal effector domain contains DNA and RNA polymerase binding sites. Several dimers or monomers bind head to tail to small tandem repeats upstream of the genes. The RNA polymerase binding sites interact with the alpha or sigma subunite of RNA polymerase.
Probab=27.15 E-value=96 Score=26.11 Aligned_cols=58 Identities=19% Similarity=0.261 Sum_probs=37.3
Q ss_pred CcHHHHHHHHHHHhhCCcEEEEccCcchHHHhhhhCCCCCCCCccccccccccchhHHHHHHHHHHHHHHcCCC
Q 005523 196 FSSDAAEELKEAIAKKNHELVYLYDLNLVDVIWKESRPKPPNKPIRVHALKYAGLDVASKLSSLRSDLVDAGSS 269 (692)
Q Consensus 196 ~s~~~~~~L~~~l~~~~~~l~~~~~~~lvd~~w~~~rp~~~~~~~~~~~~~fs~~e~~~Rl~rlr~~m~e~glD 269 (692)
+|-.+++-|.-.+... .+.++- ..+++.+|++ .+. .+...+...+.+||+.|.+.+..
T Consensus 24 Lt~~e~~lL~~L~~~~-~~~vs~--~~l~~~lw~~-~~~------------~~~~~l~~~I~rLRkkl~~~~~~ 81 (95)
T cd00383 24 LTPKEFELLELLARNP-GRVLSR--EQLLEAVWGD-DYD------------VDDRTVDVHISRLRKKLEDDPSN 81 (95)
T ss_pred eCHHHHHHHHHHHhCC-CCcCCH--HHHHHHhcCC-CCC------------CCcccHHHHHHHHHHHhccCCCC
Confidence 4555666555444433 366775 8899999952 221 12244678899999999876643
No 88
>smart00862 Trans_reg_C Transcriptional regulatory protein, C terminal. This domain is almost always found associated with the response regulator receiver domain. It may play a role in DNA binding.
Probab=25.95 E-value=1.3e+02 Score=24.20 Aligned_cols=58 Identities=17% Similarity=0.274 Sum_probs=36.3
Q ss_pred CcHHHHHHHHHHHhhCCcEEEEccCcchHHHhhhhCCCCCCCCccccccccccchhHHHHHHHHHHHHHHcCC
Q 005523 196 FSSDAAEELKEAIAKKNHELVYLYDLNLVDVIWKESRPKPPNKPIRVHALKYAGLDVASKLSSLRSDLVDAGS 268 (692)
Q Consensus 196 ~s~~~~~~L~~~l~~~~~~l~~~~~~~lvd~~w~~~rp~~~~~~~~~~~~~fs~~e~~~Rl~rlr~~m~e~gl 268 (692)
+|..+++-|.-.+... .+.++- ..+++.+|+ +.+ ..-+...+...+.+||+.|.+.+.
T Consensus 6 Lt~~e~~lL~~L~~~~-~~~vs~--~~l~~~lw~-~~~-----------~~~~~~~l~~~i~~LR~~l~~~~~ 63 (78)
T smart00862 6 LTPKEFRLLELLLRNP-GRVVSR--EELLEAVWG-DDD-----------DDVDDNTLDVHISRLRKKLEDDGA 63 (78)
T ss_pred cCHHHHHHHHHHHhCC-CCccCH--HHHHHHHcC-CCC-----------CCCccchHHHHHHHHHHHHhcCCC
Confidence 4666677443333333 346665 889999995 222 011235578899999999988654
No 89
>TIGR00035 asp_race aspartate racemase.
Probab=25.82 E-value=5.3e+02 Score=25.97 Aligned_cols=137 Identities=16% Similarity=0.176 Sum_probs=70.9
Q ss_pred CCHHHHHHHHHHHhcCCCCCccEEEEcCCCCCcccccccccccceEecCccCCCeEEEEeCCceEEEcCcccHHHHHhhc
Q 005523 79 DAPDEKLRALRELFSRPGVNIDAYIIPSQDAHQSEFIAECYMRRAYISGFTGSAGTAVVTKDKAALWTDGRYFLQAEKQL 158 (692)
Q Consensus 79 ~~~~~Rl~~lr~~m~~~~~~lDa~lI~~~d~h~se~~~~~~~~i~YlTGFtgs~g~~vit~~~~~L~td~ry~~qa~~~~ 158 (692)
.+....+.+.-+.|.+ .|+|+++|+-- - ...+..+.++.+
T Consensus 58 ~~~~~~l~~~~~~L~~--~g~d~iviaCN--------------T------------------------ah~~~~~l~~~~ 97 (229)
T TIGR00035 58 DRPRPILIDIAVKLEN--AGADFIIMPCN--------------T------------------------AHKFAEDIQKAI 97 (229)
T ss_pred chHHHHHHHHHHHHHH--cCCCEEEECCc--------------c------------------------HHHHHHHHHHhC
Confidence 3466677777788888 89999999642 1 111123455544
Q ss_pred CCcEEEEEcCCCCCCCHHHHHHhhcCCCCeEEEcCCCCcHHHHHHHHHHHhhCCcEEEEccCcchHHHhhhhCCCCCCCC
Q 005523 159 SSSWILMRSGNHGVPTTFEWLNDVLAPGGRVGIDPFLFSSDAAEELKEAIAKKNHELVYLYDLNLVDVIWKESRPKPPNK 238 (692)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ig~e~~~~s~~~~~~L~~~l~~~~~~l~~~~~~~lvd~~w~~~rp~~~~~ 238 (692)
+- .+... .+...+.+++ .+.++||+=....|...-. +++.+.+.|++.+.. +..+++.+-.
T Consensus 98 ~i--Pii~i----~~~~~~~~~~--~~~~~VgvLaT~~T~~s~~-y~~~l~~~g~~v~~p-~~~~~~~i~~--------- 158 (229)
T TIGR00035 98 GI--PLISM----IEETAEAVKE--DGVKKAGLLGTKGTMKDGV-YEREMKKHGIEIVTP-DKEEQEAIMS--------- 158 (229)
T ss_pred CC--CEech----HHHHHHHHHH--cCCCEEEEEecHHHHHhHH-HHHHHHHCCCEEECC-CHHHHHHHHH---------
Confidence 31 12111 1112233332 2457899876555554422 445555556665432 1333332210
Q ss_pred ccccccccccc-hhHHHHHHHHHHHHHHcCCCEEEEcc
Q 005523 239 PIRVHALKYAG-LDVASKLSSLRSDLVDAGSSAIVISM 275 (692)
Q Consensus 239 ~~~~~~~~fs~-~e~~~Rl~rlr~~m~e~glDallis~ 275 (692)
.++ ...+-.. .+..+++.++-+.|.++|+|++|+.-
T Consensus 159 ~i~-~~~~~g~~~~~~~~l~~~~~~l~~~gad~iILgC 195 (229)
T TIGR00035 159 GIY-DEVKAGNIELGRELLLKIAKELEERGAEGIILGC 195 (229)
T ss_pred HHH-HHHhcCCcHHHHHHHHHHHHHHHhCCCCEEEEeC
Confidence 011 0000001 34556677777778889999988854
No 90
>PF14980 TIP39: TIP39 peptide
Probab=23.91 E-value=72 Score=23.95 Aligned_cols=18 Identities=39% Similarity=0.798 Sum_probs=12.1
Q ss_pred cCCH-HHHHHHHHHHHHHH
Q 005523 668 LLSA-AEIDWLNNYHSQVW 685 (692)
Q Consensus 668 l~~~-~e~~~~n~y~~~~~ 685 (692)
||+. +-++|||.|-++..
T Consensus 29 Ll~amER~~WLnSYMqkLL 47 (51)
T PF14980_consen 29 LLTAMERQKWLNSYMQKLL 47 (51)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 3443 34689999988753
No 91
>PF02900 LigB: Catalytic LigB subunit of aromatic ring-opening dioxygenase; InterPro: IPR004183 Dioxygenases catalyse the incorporation of both atoms of molecular oxygen into substrates using a variety of reaction mechanisms. Cleavage of aromatic rings is one of the most important functions of dioxygenases, which play key roles in the degradation of aromatic compounds. The substrates of ring-cleavage dioxygenases can be classified into two groups according to the mode of scission of the aromatic ring. Intradiol enzymes (IPR000627 from INTERPRO) use a non-haem Fe(III) to cleave the aromatic ring between two hydroxyl groups (ortho-cleavage), whereas extradiol enzymes use a non-haem Fe(II) to cleave the aromatic ring between a hydroxylated carbon and an adjacent non-hydroxylated carbon (meta-cleavage) [, ]. These two subfamilies differ in sequence, structural fold, iron ligands, and the orientation of second sphere active site amino acid residues. Extradiol dioxygenases are usually homo-multimeric, bind one atom of ferrous ion per subunit and have a subunit size of about 33 kDa. Extradiol dioxygenases can be divided into three classes. Class I and II enzymes (IPR000486 from INTERPRO) show sequence similarity, with the two-domain class II enzymes having evolved from a class I enzyme through gene duplication. Class III enzymes are different in sequence and structure, but they do share several common active-site characteristics with the class II enzymes, in particular the coordination sphere and the disposition of the putative catalytic base are very similar. Class III enzymes usually have two subunits, designated A and B. Enzymes that belong to the extradiol class III family include Protocatechuate 4,5-dioxygenase (4,5-PCD; LigAB) (1.13.11.8 from EC) []; and 2'-aminobiphenyl-2,3-diol 1,2-dioxygenase (CarBaBb) []. The crystal structure of dioxygenase LigAB revealed that the molecule is an alpha2beta2 tetramer. The active site contains a non-heme iron coordinated by His12, His61, Glu242, and a water molecule located in a deep cleft of the beta subunit, which is covered by the alpha subunit []. This entry represents the structural domain of subunit B.; GO: 0008198 ferrous iron binding, 0016491 oxidoreductase activity, 0006725 cellular aromatic compound metabolic process; PDB: 2PW6_A 1B4U_D 1BOU_B.
Probab=21.78 E-value=3.9e+02 Score=27.68 Aligned_cols=52 Identities=15% Similarity=0.122 Sum_probs=32.4
Q ss_pred HHHHHHHHHHHhcCCCCCccEEEEcCCCCCcccccccccccceEecCccCCC--eEEEEeCCceEEEcCcc
Q 005523 81 PDEKLRALRELFSRPGVNIDAYIIPSQDAHQSEFIAECYMRRAYISGFTGSA--GTAVVTKDKAALWTDGR 149 (692)
Q Consensus 81 ~~~Rl~~lr~~m~~~~~~lDa~lI~~~d~h~se~~~~~~~~i~YlTGFtgs~--g~~vit~~~~~L~td~r 149 (692)
+.+=++++++.+++ .+.|++||.++| |.++|..+. .++|-.....-.+-|..
T Consensus 26 ~~~~~~~~~~~l~~--~~pd~ivvis~h---------------~~~~f~~~~~p~~~v~~~~~~~~~~d~~ 79 (272)
T PF02900_consen 26 TFAALQELGRRLRE--AKPDVIVVISPH---------------WFTNFFEDNMPAFAVGSGEEPEGIYDFY 79 (272)
T ss_dssp HHHHHHHHHHHCHS--TS-SEEEEEEEE---------------ECCS--TTCEECBEEE-SSEE-B-BS--
T ss_pred HHHHHHHHHHHHHH--cCCCEEEEEeCC---------------cchhhcccCCccEEEecCCCcccccccc
Confidence 34568899999999 999999999875 888877653 34455555555666643
Done!