Query 005523
Match_columns 692
No_of_seqs 304 out of 2434
Neff 7.3
Searched_HMMs 29240
Date Tue Mar 26 17:54:28 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/005523.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_2032-2036//hhsearch_pdb/005523hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ctz_A XAA-Pro aminopeptidase 1.0 1 1 954.5 52.0 580 79-691 4-599 (623)
2 3q6d_A Proline dipeptidase; st 1.0 1 1 524.3 33.4 348 250-661 1-353 (356)
3 4ege_A Dipeptidase PEPE; struc 1.0 1 1 518.5 35.2 367 238-664 1-376 (378)
4 4fkc_A XAA-Pro aminopeptidase; 1.0 1 1 516.5 32.9 358 243-660 6-373 (377)
5 2zsg_A Aminopeptidase P, putat 1.0 1 1 500.8 33.7 345 254-662 2-357 (359)
6 3biq_A FACT complex subunit SP 1.0 1 1 495.6 33.8 384 245-675 6-456 (467)
7 1wn1_A Dipeptidase; prolidase, 1.0 1 1 494.8 30.8 344 254-662 1-354 (356)
8 1wy2_A XAA-Pro dipeptidase; st 1.0 1 1 490.1 33.8 341 253-660 5-349 (351)
9 4b28_A Metallopeptidase, famil 1.0 1 1 489.8 25.2 363 244-666 71-469 (470)
10 1kp0_A Creatine amidinohydrola 1.0 1 1 488.9 34.3 367 244-663 16-397 (402)
No 1
>3ctz_A XAA-Pro aminopeptidase 1; PITA-bread fold, alternative splicing, cytoplasm, hydrolase, manganese, metal-binding, metalloprotease, protease; HET: P6G; 1.60A {Homo sapiens}
Probab=1.00 E-value=1 Score=954.47 Aligned_cols=580 Identities=49% Similarity=0.846 Sum_probs=530.3
Q ss_pred CCHHHHHHHHHHHHCCCCCC-----CCEEEECCCCCCCCCCCCCCCCCCEEECCCCCCCEEEEEECCCEEEECCCCCHHH
Q ss_conf 99899999999993389999-----5499983899776422115345405732766897289993892199908603888
Q 005523 79 DAPDEKLRALRELFSRPGVN-----IDAYIIPSQDAHQSEFIAECYMRRAYISGFTGSAGTAVVTKDKAALWTDGRYFLQ 153 (692)
Q Consensus 79 ~~~~~Rl~~Lr~~l~~~~~~-----lDa~iI~~~d~h~~e~~~~~~~ni~YlTGFtgs~g~~iit~~~~~L~tD~ry~~q 153 (692)
+++.+||++||+.|++ ++ +||+|||+.|+|||||+++|++|++||||||||+|++|||.++++||||+||+.|
T Consensus 4 ~~~~~Rl~~LR~~m~~--~~~~~~~lda~lv~~~D~h~sey~~~~~~~~~ylsGFtGSaG~~vVt~~~a~l~tDgRY~~Q 81 (623)
T 3ctz_A 4 KVTSELLRQLRQAMRN--SEYVTEPIQAYIIPSGDAHQSEYIAPCDCRRAFVSGFDGSAGTAIITEEHAAMWTDGRYFLQ 81 (623)
T ss_dssp BCCHHHHHHHHHHTTC--TTTCSSCCSEEEECSCCTTCCSSCCGGGCHHHHHHSCCSSCCEEEEESSCEEEEECGGGHHH
T ss_pred CCHHHHHHHHHHHHHH--CCCCCCCEEEEEECCCCCCCCCCCCCHHCCCEECCCCCCCCEEEEEECCEEEEEECCHHHHH
T ss_conf 8889999999999996--59987744699978887443434532330523446767876599996680189988489999
Q ss_pred HHHHCCCCEEEEECCCCCCCCHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHCCC
Q ss_conf 97432774899981899998899999855199985999599986999999999995079699983674057886310899
Q 005523 154 AEKQLSSSWILMRSGNHGVPTTFEWLNDVLAPGGRVGIDPFLFSSDAAEELKEAIAKKNHELVYLYDLNLVDVIWKESRP 233 (692)
Q Consensus 154 A~~q~~~~~~v~~~~~~~~~~~~~~l~~~~~~~~rig~e~~~~s~~~~~~L~~~l~~~~~~l~~~~~~~lvd~lw~~~rp 233 (692)
|++|++.+|+++..+.++.+.+.+|+.+.+..+++||||++++|++.+++|++.|+..+++|+++ ..|+||.+| .+||
T Consensus 82 A~~ql~~~~~l~~~~~~~~~~~~~~l~~~l~~~~~vG~d~~~~s~~~~~~l~~~l~~~~~~lv~~-~~~lvd~iw-~~Rp 159 (623)
T 3ctz_A 82 AAKQMDSNWTLMKMGLKDTPTQEDWLVSVLPEGSRVGVDPLIIPTDYWKKMAKVLRSAGHHLIPV-KENLVDKIW-TDRP 159 (623)
T ss_dssp HHHHBCTTEEEEETTSTTCCCHHHHHHHHCCTTCEEEECGGGSBHHHHHHHHHHHHHTTCEEEEC-SSCHHHHHC-TTCC
T ss_pred HHHHCCCCEEEEEECCCCCCCHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCEEEEC-CCCCHHHHH-HCCC
T ss_conf 99865896599991577886599999975758998997855054999999999887669789756-888077884-1699
Q ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHCCCCCCCCCCCCCEEEEEEEECCCEEEEEEC
Q ss_conf 99987211141122442199999999999888499899984641144422988999899951146999957936999819
Q 005523 234 KPPNKPIRVHALKYAGLDVASKLSSLRSDLVDAGSSAIVISMLDEIAWLLNLRGSDVPHSPVMYAYLIVEMDRAKLFVDD 313 (692)
Q Consensus 234 ~~~~~~~~~~~~~f~g~e~~~Rl~rLr~~L~e~giDaliis~~~ni~YLtG~~g~d~p~~Pv~~a~liv~~~~~~Lfvd~ 313 (692)
..|..+++.++.+|+++++++|++++|+.|+++++|++||++++|++||+|++|.+++++|++++|++|+.++++||++.
T Consensus 160 ~k~~~e~~~~~~~~ag~~~~~rl~~lr~~m~e~~~dallit~~~~i~yl~~~~G~dv~~~pi~~~~llv~~~~~~l~v~~ 239 (623)
T 3ctz_A 160 ERPCKPLLTLGLDYTGISWKDKVADLRLKMAERNVMWFVVTALDEIAWLFNLRGSDVEHNPVFFSYAIIGLETIMLFIDG 239 (623)
T ss_dssp CCCCCCCEECCHHHHSSCHHHHHHHHHHHHHTTTEEEEEECCHHHHHHHHTEECCSSSSSCCCSCEEEEESSCEEEECCS
T ss_pred CCCCHHHHHCCHHHCCHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCEEEEEC
T ss_conf 99931356463644473499999999999987599789989888879986898866888810568999946976899952
Q ss_pred CCCCH-HHHHHHH-------CCCEEEEECCCHHHHHHHHHHC---CCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 99998-8985411-------0782997353089999997855---99699918987099999999999886630256565
Q 005523 314 SKVTP-DVMDHLK-------NAGVELRPYNSILSEIKSLAAQ---GAQLWLDPSSVNAAIMNTYEIAIEKYLTSNNNKKS 382 (692)
Q Consensus 314 ~~~~~-~v~~~l~-------~~~v~i~~y~~i~~~l~~l~~~---~~~ig~d~~~~s~~~~~~L~~~~~~~~~~~~~~~~ 382 (692)
.+... .+.+++. ..++++++|.++.+.++.+... .+++++|.+ .++++++.|..
T Consensus 240 ~~~~~~~~~~~l~~~~~~p~~~~v~v~~y~~~~~~l~~l~~~~~~~~~i~id~~-~~~~l~~~l~~-------------- 304 (623)
T 3ctz_A 240 DRIDAPSVKEHLLLDLGLEAEYRIQVHPYKSILSELKALCADLSPREKVWVSDK-ASYAVSETIPK-------------- 304 (623)
T ss_dssp GGGGSHHHHHHTTTTSCCCGGGCEEEECGGGHHHHHHHHHHTCCTTCEEEEETT-SBHHHHHHSCG--------------
T ss_pred HHCCHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCCEEEEECCH-HHHHHHHHCCC--------------
T ss_conf 125879999987421455667843999717889999999861567709998845-25999986656--------------
Q ss_pred CCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
Q ss_conf 55556677888999961003785321123489999999999999999999999999999861299879999999999999
Q 005523 383 KTKMHTDTTGQSGGPAGVFRTSPIAFSKAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFR 462 (692)
Q Consensus 383 ~~~~~~~~~~~~~~~~~vd~~~~I~~lR~iKs~~EIe~lR~A~~i~~~a~~~~~~~l~~~i~~~~G~TE~eia~~l~~~~ 462 (692)
..++++..+++..+|+|||+.||+.||+|+.++++|+.++++++++.+ .++|+||.|+++.++.++
T Consensus 305 -------------~~~~v~~~~~i~~~R~iK~~~EI~~~r~A~~~~~~a~~~~~~~l~~~i-~~~g~tE~el~~~l~~~~ 370 (623)
T 3ctz_A 305 -------------DHRCCMPYTPICIAKAVKNSAESEGMRRAHIKDAVALCELFNWLEKEV-PKGGVTEISAADKAEEFR 370 (623)
T ss_dssp -------------GGEEEESSCHHHHHHHSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHG-GGTCCBHHHHHHHHHHHH
T ss_pred -------------CCEEEECCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCCCCCHHHHHHHHHHHH
T ss_conf -------------646985636799988569999999999999999999999999999865-789975999999999999
Q ss_pred HHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCEEECCEEEEEEEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 97279998887513421799852234689999863479984999645257886800475787699999999999999999
Q 005523 463 SKQSGFLDTSFDTISGSGANGAIIHYKPEPGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQG 542 (692)
Q Consensus 463 ~~~~G~~~~~f~~iv~sG~n~a~~h~~p~~~~~r~l~~Gdiv~iD~g~~y~gy~sD~tRT~~~G~p~~~~~~~~~~v~~a 542 (692)
....|+.+.+|++|+++|+|++.+||.|++.++++|++||++++|+|++|+||++|+|||+++|+|+++++++|++|+++
T Consensus 371 ~~~~g~~~~sf~~iv~~G~n~a~~H~~~~~~~~~~l~~gd~vliD~G~~y~gy~sDiTRT~~vG~~s~~~~~~y~~vl~a 450 (623)
T 3ctz_A 371 RQQADFVDLSFPTISSTGPTGAIIHYAPVPETNRTLSLDEVYLIDSGAQYKDGTTDVTRTMHFETPTAYEKECFTYVLKG 450 (623)
T ss_dssp HTSTTEEEESSCCEEEEGGGGGCTTCCCCGGGCCBCCTTSCEEEEECEEETTEECCEEEEECSSCCCHHHHHHHHHHHHH
T ss_pred HHCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCEEEEEEEEEECCCCCHHHHHHHHHHHHH
T ss_conf 96489867887852564376530367878888854579998999975899999998789998799999999999999999
Q ss_pred HHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCEEEECC
Q ss_conf 99999800789987689999999999982999867753223467743457976456689985224899899863002269
Q 005523 543 HIALDQAIFPQSTPGFVLDAFARSSLWKIGLDYRHGTGHGVGAALNVHEGPQSISFRYGNMTPLVEGMIVSNEPGYYEDH 622 (692)
Q Consensus 543 ~~~~~~~~~P~G~~~~di~~~a~~~l~~~G~~~~h~~GHGiG~~l~~hE~P~~i~~~~~~~~~Le~GMv~siEPgiy~~g 622 (692)
+.+++++++|.|+++.+++.++++.+++.|++|.|++|||||+++++||+|..++.+.+++.+|++|||||+|||+|.+|
T Consensus 451 ~~~~~~~~~p~G~~~~~id~~ar~~l~~~G~~~~h~~GHgvG~~l~vHE~P~~i~~~~~~~~~L~~GMv~tiEPGiy~~g 530 (623)
T 3ctz_A 451 HIAVSAAVFPTGTKGHLLDSFARSALWDSGLDYLHGTGHGVGSFLNVHEGPCGISYKTFSDEPLEAGMIVTDEPGYYEDG 530 (623)
T ss_dssp HHHHHTCCEETTCBGGGGGGGGTHHHHHTTCCCSSCSEEBCCSSSCSSCCSCEECTTCSCSCBCCTTCEEEECCEEEETT
T ss_pred HHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCEEECC
T ss_conf 99999974759985999999999999982998888764158787877799756787899997518980999838689789
Q ss_pred CCEEEEEEEEEEECCCCCCCCCCCCCCCEEECCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 124999899999417988878985556706815888764201010399988999999999999983689
Q 005523 623 AFGIRIENLLYVKEVGTPNRFGGVSYLGFEKLTFVPIQTKLVDLSLLSAAEIDWLNNYHSQVWEKVSKS 691 (692)
Q Consensus 623 ~~GiriEdtvlVte~~~~~~~~~~~~lG~E~LT~~P~~~~li~~~l~~~~e~~~~n~y~~~~~~~~~~~ 691 (692)
.+|+||||+|+||++++.++||+.+|||||+||.+|++.++|+.+|||++|++|||+||++|+++|+|.
T Consensus 531 ~~GiRiEd~vlVt~~~~~~~~~~~~~lg~e~LT~~P~~~~~i~~~ll~~~e~~wln~yh~~v~~~~~p~ 599 (623)
T 3ctz_A 531 AFGIRIENVVLVVPVKTKYNFNNRGSLTLEPLTLVPIQTKMIDVDSLTDKECDWLNNYHLTCRDVIGKE 599 (623)
T ss_dssp TEEEECBEEEEEEEECCSSCCSSSCEEEEEECCCCCCCGGGSCGGGSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEEEEEEEECCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 269997359999428866665554556874200587538988778589999999999999999987675
No 2
>3q6d_A Proline dipeptidase; structural genomics, csgid, center for structural genomics O infectious diseases, aminopeptidase, viral protein; 1.97A {Bacillus anthracis}
Probab=1.00 E-value=1 Score=524.35 Aligned_cols=348 Identities=25% Similarity=0.385 Sum_probs=310.5
Q ss_pred HHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHCCCCCCCCCCCCCEEEEEEEECCCEEEEEECCCCCHHHHHHHHCCCE
Q ss_conf 21999999999998884998999846411444229889998999511469999579369998199999889854110782
Q 005523 250 LDVASKLSSLRSDLVDAGSSAIVISMLDEIAWLLNLRGSDVPHSPVMYAYLIVEMDRAKLFVDDSKVTPDVMDHLKNAGV 329 (692)
Q Consensus 250 ~e~~~Rl~rLr~~L~e~giDaliis~~~ni~YLtG~~g~d~p~~Pv~~a~liv~~~~~~Lfvd~~~~~~~v~~~l~~~~v 329 (692)
+++.+|+++||+.|+++|+|++||++++|++|||||++++ ++++|+.+++.||+|. ++..++...+. ++
T Consensus 1 ~~~~~Rl~~lr~~m~~~giDa~lI~~~~ni~YLtGf~g~~--------~~llvt~~~~~l~~d~-r~~~~a~~~~~--~~ 69 (356)
T 3q6d_A 1 SNAMEKIERLRSAFDEAGIDGILLTNEHSRRYMANFTGTA--------GVVLISKKRAQFITDF-RYVEQASKQAV--GY 69 (356)
T ss_dssp -CHHHHHHHHHTTHHHHTCSEEEECCHHHHHHHHCCCSSS--------CEEEEESSCEEEEECG-GGHHHHHHHST--TS
T ss_pred CCHHHHHHHHHHHHHHCCCCEEEECCHHHCEECCCCCCCC--------EEEEEECCCEEEEECH-HHHHHHHHHCC--CC
T ss_conf 9678999999999998699999989844345754898788--------6999978974999872-45899996479--97
Q ss_pred EEEEC-CCHHHHHHHHHH--CCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEECCCCC
Q ss_conf 99735-308999999785--599699918987099999999999886630256565555566778889999610037853
Q 005523 330 ELRPY-NSILSEIKSLAA--QGAQLWLDPSSVNAAIMNTYEIAIEKYLTSNNNKKSKTKMHTDTTGQSGGPAGVFRTSPI 406 (692)
Q Consensus 330 ~i~~y-~~i~~~l~~l~~--~~~~ig~d~~~~s~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~I 406 (692)
++..| .+..+.+.++.. ..+++|+|.+.+++..++.|++.+ ++ +++++++++
T Consensus 70 ~v~~~~~~~~~~l~~~l~~~~~~~igve~~~~~~~~~~~l~~~~------------------------~~-~~~~~~~~~ 124 (356)
T 3q6d_A 70 EIVQHAGLIIDEVAKQVKELGIQKLGFEQDTLTYSSYSAHKEAI------------------------DA-EFIPTSGLV 124 (356)
T ss_dssp EEEECSSCHHHHHHHHHHHHTCSEEEEETTTSBHHHHHHHHHHC------------------------CS-EEEEECSHH
T ss_pred EEEEECCCHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHC------------------------CC-CEECCHHHH
T ss_conf 79995788899999999863996399757647799999996356------------------------43-354246655
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCC
Q ss_conf 21123489999999999999999999999999999861299879999999999999972799988875134217998522
Q 005523 407 AFSKAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGFLDTSFDTISGSGANGAII 486 (692)
Q Consensus 407 ~~lR~iKs~~EIe~lR~A~~i~~~a~~~~~~~l~~~i~~~~G~TE~eia~~l~~~~~~~~G~~~~~f~~iv~sG~n~a~~ 486 (692)
..+|++||++||+.||+|+++++.++..+++++ +||+||.|+++.++... ...|+.+.+|++++++|+|++.+
T Consensus 125 ~~~R~iK~~~Ei~~~r~A~~i~~~~~~~~~~~i------~~G~te~e~~~~~~~~~-~~~g~~~~~f~~iv~~g~n~~~~ 197 (356)
T 3q6d_A 125 EKLRLIKTDSEIKILKEAAQIADAAFEHILSFI------RPGVSEIEVSNELEFFM-RKQGATSSSFDIIVASGLRSALP 197 (356)
T ss_dssp HHHHTSCCHHHHHHHHHHHHHHHHHHHHHTTTC------CTTCBHHHHHHHHHHHH-HHTTCSEESSCCEEEEGGGGGCT
T ss_pred HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC------CCCCCHHHHHHHHHHHH-HHCCCCCCCCCCEEEECCCCCCC
T ss_conf 544558999999999999999999999999975------69998999999999999-98799868988778974762557
Q ss_pred CCCCCCCCCCCCCCCCEEEEECCEEECCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
Q ss_conf 34689999863479984999645257886800475787699999999999999999999998007899876899999999
Q 005523 487 HYKPEPGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARS 566 (692)
Q Consensus 487 h~~p~~~~~r~l~~Gdiv~iD~g~~y~gy~sD~tRT~~~G~p~~~~~~~~~~v~~a~~~~~~~~~P~G~~~~di~~~a~~ 566 (692)
|+.|++ ++|++||+|++|+|++|+||++|+|||+++|+|+++++++|+++++++.+++++++| |+++.+++.++++
T Consensus 198 H~~~~~---~~l~~gd~v~iD~g~~~~gy~sD~tRT~~~G~~~~~~~~~~~~v~~a~~~~~~~~~p-G~~~~~i~~~~~~ 273 (356)
T 3q6d_A 198 HGVASE---KVIETGDFVTLDFGAYYKGYCSDITRTIAVGEPSDKLKEIYNIVLEAQLRGVNGIKA-GLTGREADALTRD 273 (356)
T ss_dssp TCBCCS---CBCCTTCEEEEEECEEETTEECCEEEEEESSCCCHHHHHHHHHHHHHHHHHHHHCCT-TCBHHHHHHHHHH
T ss_pred CCCCCC---CCCCCCCEEEEEEEEEECCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCC-CCCHHHHHHHHHH
T ss_conf 788898---626799999999707789898512799986999999999999999999999998169-8929999999999
Q ss_pred HHHHCCC--CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCEEEECCCCEEEEEEEEEEECCCCCCCCC
Q ss_conf 9998299--98677532234677434579764566899852248998998630022691249998999994179888789
Q 005523 567 SLWKIGL--DYRHGTGHGVGAALNVHEGPQSISFRYGNMTPLVEGMIVSNEPGYYEDHAFGIRIENLLYVKEVGTPNRFG 644 (692)
Q Consensus 567 ~l~~~G~--~~~h~~GHGiG~~l~~hE~P~~i~~~~~~~~~Le~GMv~siEPgiy~~g~~GiriEdtvlVte~~~~~~~~ 644 (692)
.+++.|+ +|.|++||||| +++||.|. ++ ++++.+|++||||++|||+|.+|++|+|+||+++||++
T Consensus 274 ~~~~~g~~~~~~h~~GHgiG--l~~he~p~-i~--~~~~~~l~~Gmv~tiEPgiy~~g~~gvriEd~v~vt~~------- 341 (356)
T 3q6d_A 274 YITEKGYGEYFGHSTGHGIG--LEIHEAPG-LA--FRSDTVLEPGMAVTVEPGIYIPGIGGVRIEDDIIVTSE------- 341 (356)
T ss_dssp HHHHTTCGGGCCSCSEEECS--SSSSEEEE-ES--TTCCCBCCTTCEEEECCEEEETTTEEEECBEEEEECSS-------
T ss_pred HHHHCCCCCCCCCCCCCCCC--CCCCCCCC-CC--CCCCCCCCCCCEEEECCEEEECCCCEEEECCEEEEECC-------
T ss_conf 99976996448999706588--87676887-78--99998869999999899888789876997568999499-------
Q ss_pred CCCCCCEEECCCCCCCC
Q ss_conf 85556706815888764
Q 005523 645 GVSYLGFEKLTFVPIQT 661 (692)
Q Consensus 645 ~~~~lG~E~LT~~P~~~ 661 (692)
|+|+||..|++.
T Consensus 342 -----G~e~Lt~~p~~l 353 (356)
T 3q6d_A 342 -----GNEVITKSPKEL 353 (356)
T ss_dssp -----SEEECCCSCCSC
T ss_pred -----CCEECCCCCCCE
T ss_conf -----356699999643
No 3
>4ege_A Dipeptidase PEPE; structural genomics, seattle structural genomics center for infectious disease, ssgcid, hydrolase; 2.20A {Mycobacterium ulcerans}
Probab=1.00 E-value=1 Score=518.48 Aligned_cols=367 Identities=25% Similarity=0.327 Sum_probs=318.8
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHCCCCCCCCCCCCCEEEEEEEECC-CEEEEEECCCC
Q ss_conf 72111411224421999999999998884998999846411444229889998999511469999579-36999819999
Q 005523 238 KPIRVHALKYAGLDVASKLSSLRSDLVDAGSSAIVISMLDEIAWLLNLRGSDVPHSPVMYAYLIVEMD-RAKLFVDDSKV 316 (692)
Q Consensus 238 ~~~~~~~~~f~g~e~~~Rl~rLr~~L~e~giDaliis~~~ni~YLtG~~g~d~p~~Pv~~a~liv~~~-~~~Lfvd~~~~ 316 (692)
.|++.++..|+++++++|++++|+.|+++|+|++||++++|++|||||++.+. .++ ++++|+.+ +++||++...
T Consensus 1 ~~~~~~~~~~~~~e~~~R~~~l~~~m~~~g~da~li~~~~ni~YltG~~~~~~-~r~---~~l~v~~~g~~~l~~~~~~- 75 (378)
T 4ege_A 1 GPGSMDSGRFDTAVYARRLAAAAAATEQAGLAGLVITPGYDLRYLIGSRADTF-ERL---TALVLPASGVPTIVLPRLE- 75 (378)
T ss_dssp -------CCCCHHHHHHHHHHHHHHHHHTTCSEEEECSSHHHHHHHCCCCCCS-SSC---CEEEEESSSCCEEEEEGGG-
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHCCCCCCC-CCE---EEEEEEECCCEEEEECHHH-
T ss_conf 99987688889799999999999999876998999878214687418978887-511---7999980991799989312-
Q ss_pred CHHHHHH-HHCCCEEEEECCC---HHHHHHHHHHCC-CEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf 9889854-1107829973530---899999978559-9699918987099999999999886630256565555566778
Q 005523 317 TPDVMDH-LKNAGVELRPYNS---ILSEIKSLAAQG-AQLWLDPSSVNAAIMNTYEIAIEKYLTSNNNKKSKTKMHTDTT 391 (692)
Q Consensus 317 ~~~v~~~-l~~~~v~i~~y~~---i~~~l~~l~~~~-~~ig~d~~~~s~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (692)
...+... +...++++.+|.+ ..+.+.++...+ +++|+| +.+++..+..|.+.+
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~igve-~~~~~~~~~~l~~~~--------------------- 133 (378)
T 4ege_A 76 LASLKESAASDLGVCVRDWVDGDDPYQLVAVALGGAPAATAVT-DSMPALHLLPLADAL--------------------- 133 (378)
T ss_dssp GGGGGTSSTTTTTCEEEEECTTSCHHHHHHHHTTSSSCCEEEC-TTCCHHHHHHHHHHH---------------------
T ss_pred HHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCEEEEC-CCCCHHHHHHHHHHC---------------------
T ss_conf 9999853267897599995588899999999873479789996-777699999999872---------------------
Q ss_pred CCCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 88999961003785321123489999999999999999999999999999861299879999999999999972799988
Q 005523 392 GQSGGPAGVFRTSPIAFSKAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGFLDT 471 (692)
Q Consensus 392 ~~~~~~~~vd~~~~I~~lR~iKs~~EIe~lR~A~~i~~~a~~~~~~~l~~~i~~~~G~TE~eia~~l~~~~~~~~G~~~~ 471 (692)
+.+++++++++..+|++||++||+.||+|+++++.++.++++++ +||+||.|+++.++... ...|..+.
T Consensus 134 ----~~~~~~~~~~i~~~R~iKs~~Ei~~~r~A~~i~~~a~~~~~~~i------~~G~tE~el~~~~~~~~-~~~G~~~~ 202 (378)
T 4ege_A 134 ----GVLPVLATDVLRQLRMVKEAAEVDALAKAGAAIDRVHARVPAFL------VPGRTEAQVAADIAEAI-VAEGHSAV 202 (378)
T ss_dssp ----TSCCEESHHHHHHHHTBCCHHHHHHHHHHHHHHHHHHHHHHHHC------CTTCBHHHHHHHHHHHH-HHTTCSEE
T ss_pred ----CCEEEECHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHC------CCCCCHHHHHHHHHHHH-HHCCCCCC
T ss_conf ----98698809999999876999999999999999999999999863------18988999999999999-98699777
Q ss_pred CCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCEEE-CCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 87513421799852234689999863479984999645257-88680047578769999999999999999999999800
Q 005523 472 SFDTISGSGANGAIIHYKPEPGKCSVVDSKKLFLLDSGAQY-VDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAI 550 (692)
Q Consensus 472 ~f~~iv~sG~n~a~~h~~p~~~~~r~l~~Gdiv~iD~g~~y-~gy~sD~tRT~~~G~p~~~~~~~~~~v~~a~~~~~~~~ 550 (692)
+| +++++|+|++.+|+.|++ ++|++||+|++|+|++| +||++|+|||+++|+|+++++++|+++++++.++++++
T Consensus 203 ~f-~iv~sG~n~~~~H~~~~~---~~l~~Gd~v~iD~G~~~~~GY~sD~tRT~~vG~~~~~~~~~~~~v~~a~~~~~~~~ 278 (378)
T 4ege_A 203 AF-VIVGSGPHGADPHHGYSD---RKLQVGDIVVVDIGGTYEPGYYSDSTRTYSIGDPSPDVAQQYSALQRAQRAAVDAV 278 (378)
T ss_dssp EE-EEEEEGGGGGCTTCCCCS---CBCCTTCEEEEEEEEEETTTEECCEEEEEEESCCCHHHHHHHHHHHHHHHHHHHHC
T ss_pred CE-EEEEEECCCCCCCCCCCC---CCCCCCCEEEEEEEEEECCEEEECCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHC
T ss_conf 80-089850777705789988---87489998999999997892897348999908999999999999999999999876
Q ss_pred CCCCCCHHHHHHHHHHHHHHCCC--CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCEEEECCCCEEEE
Q ss_conf 78998768999999999998299--9867753223467743457976456689985224899899863002269124999
Q 005523 551 FPQSTPGFVLDAFARSSLWKIGL--DYRHGTGHGVGAALNVHEGPQSISFRYGNMTPLVEGMIVSNEPGYYEDHAFGIRI 628 (692)
Q Consensus 551 ~P~G~~~~di~~~a~~~l~~~G~--~~~h~~GHGiG~~l~~hE~P~~i~~~~~~~~~Le~GMv~siEPgiy~~g~~Giri 628 (692)
+| |+++++|+.++++++++.|+ +|.|++||||| +++||.|. +. ++++.+|++||||++|||+|.+|.+|+|+
T Consensus 279 ~p-G~~~~~v~~~~~~~~~~~G~~~~~~h~~GHgiG--l~~hE~P~-i~--~~~~~~L~~Gmv~tiEPgiy~~g~~gvri 352 (378)
T 4ege_A 279 RP-GVTAAQVDAAARDVLADAGLAEYFVHRTGHGIG--LCVHEEPY-IV--AGNELPLVAGMAFSIEPGIYFPGRWGARI 352 (378)
T ss_dssp CT-TCBHHHHHHHHHHHHHHTTCGGGCCSCSEEECS--SSSSEEEE-EC--TTCCCBCCTTBEEEECCEEEETTTEEEEC
T ss_pred CC-CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC--CCCCCCCC-CC--CCCCCCCCCCCEEEECCEEEECCCCEEEE
T ss_conf 89-893999999999999986998769999714377--77477986-48--99988619998999879899689648999
Q ss_pred EEEEEEECCCCCCCCCCCCCCCEEECCCCCCCCCCH
Q ss_conf 899999417988878985556706815888764201
Q 005523 629 ENLLYVKEVGTPNRFGGVSYLGFEKLTFVPIQTKLV 664 (692)
Q Consensus 629 EdtvlVte~~~~~~~~~~~~lG~E~LT~~P~~~~li 664 (692)
||+|+||++ |+|+||..|++...|
T Consensus 353 Ed~v~Vt~~------------G~e~Lt~~p~~l~~~ 376 (378)
T 4ege_A 353 EDIVVVTEN------------GALSVNNRPHELMVV 376 (378)
T ss_dssp BEEEEEETT------------EEEESCCSCCSCEEE
T ss_pred EEEEEEECC------------CCEECCCCCCCCEEC
T ss_conf 429999099------------675898999742781
No 4
>4fkc_A XAA-Pro aminopeptidase; PITA-bread structure, prolidase, hydrolase; 2.60A {Thermococcus sibiricus}
Probab=1.00 E-value=1 Score=516.50 Aligned_cols=358 Identities=22% Similarity=0.310 Sum_probs=310.1
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHCCCCCCCCCCCCCEEEEEEEECCC-EEEEEECCCCCHHHH
Q ss_conf 4112244219999999999988849989998464114442298899989995114699995793-699981999998898
Q 005523 243 HALKYAGLDVASKLSSLRSDLVDAGSSAIVISMLDEIAWLLNLRGSDVPHSPVMYAYLIVEMDR-AKLFVDDSKVTPDVM 321 (692)
Q Consensus 243 ~~~~f~g~e~~~Rl~rLr~~L~e~giDaliis~~~ni~YLtG~~g~d~p~~Pv~~a~liv~~~~-~~Lfvd~~~~~~~v~ 321 (692)
.+..|.-.||++|++|||+.|+++|+|++||++++|++|||||++.+...+| .+++++.++ ++++++. ......
T Consensus 6 ~~~~~~~~Ey~~Rl~rlr~~m~~~glDalli~~~~ni~YLTG~~~~~~~~~~---~~lvv~~~g~~~~~~~~--~~~~~~ 80 (377)
T 4fkc_A 6 HHHHHGSMDYKRRIHKFQAHFGKKGFEGALVAPGSNFYYLTGFNPLGTLERL---FVLILPSEGLLTAIAPR--LYEKEL 80 (377)
T ss_dssp --CCSSSSCHHHHHHHHHHHHHHTTCCEEEECSSHHHHHHHSCCCCCCSSSC---CEEEEESSSCCEEEEEG--GGHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHEEECCCCCCCCCCCE---EEEEECCCCCEEEEECC--CHHHHH
T ss_conf 5777503999999999999999879989997887012556498988877524---99999489968999424--309999
Q ss_pred HHHHCCCEEEEEC-------CCHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
Q ss_conf 5411078299735-------308999999785599699918987099999999999886630256565555566778889
Q 005523 322 DHLKNAGVELRPY-------NSILSEIKSLAAQGAQLWLDPSSVNAAIMNTYEIAIEKYLTSNNNKKSKTKMHTDTTGQS 394 (692)
Q Consensus 322 ~~l~~~~v~i~~y-------~~i~~~l~~l~~~~~~ig~d~~~~s~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (692)
+.+. .++..| ..+.+.++++...++++++| +.++...+..+++.+
T Consensus 81 ~~~~---~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~d-~~~~~~~~~~l~~~~------------------------ 132 (377)
T 4fkc_A 81 EEFN---GEVVLWSDSENPYKIFATKIKETFKEGEKLLID-DTMPVGVFLKAKDIF------------------------ 132 (377)
T ss_dssp TTCS---SEEEEECTTSCHHHHHHHHHHHHSCSSCEEEEC-TTSCHHHHHHTHHHH------------------------
T ss_pred HHCC---CCEEEECCCCCHHHHHHHHHHHHHHCCCEEEEE-CCCCHHHHHHHHHHC------------------------
T ss_conf 8668---977975154377999999998753135546420-440499999998648------------------------
Q ss_pred CCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf 99961003785321123489999999999999999999999999999861299879999999999999972799988875
Q 005523 395 GGPAGVFRTSPIAFSKAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGFLDTSFD 474 (692)
Q Consensus 395 ~~~~~vd~~~~I~~lR~iKs~~EIe~lR~A~~i~~~a~~~~~~~l~~~i~~~~G~TE~eia~~l~~~~~~~~G~~~~~f~ 474 (692)
++.+++|++++|..+|+|||++||+.||+|+++++.++.++++++ ++|+||.|+++.++....+..|..+.+|+
T Consensus 133 ~~~~~~d~~~~i~~lR~iKs~~EI~~~r~A~~i~~~a~~~~~~~~------~~G~tE~el~~~~~~~~~~~~g~~~~~f~ 206 (377)
T 4fkc_A 133 DKYSLHPISPVISELREIKDKDEIKAHKKAAEIVDKVFYRFIEGK------LEGKSERELANRIEYMIKNEFGADDVSFE 206 (377)
T ss_dssp TTSEEEESHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHHHHTTSC------CTTCBHHHHHHHHHHHHHTSTTCCEESSC
T ss_pred CCCEEEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCC------CCCCCHHHHHHHHHHHHHHCCCCCCCCCC
T ss_conf 998698819999999832999999999999799999988665416------79861999988776555421478776667
Q ss_pred EEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCEEECCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 13421799852234689999863479984999645257886800475787699999999999999999999998007899
Q 005523 475 TISGSGANGAIIHYKPEPGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFPQS 554 (692)
Q Consensus 475 ~iv~sG~n~a~~h~~p~~~~~r~l~~Gdiv~iD~g~~y~gy~sD~tRT~~~G~p~~~~~~~~~~v~~a~~~~~~~~~P~G 554 (692)
+|+++|+|++.+|+.|++ +++++||+|++|+|++|+||++|+||||++|+|+++++++|+++++++.+++++++| |
T Consensus 207 ~iv~~G~n~~~~H~~~~~---~~l~~gd~v~iD~g~~~~gy~sD~tRT~~~G~~~~~~~~~~~~v~~a~~~~~~~~~p-G 282 (377)
T 4fkc_A 207 PIVASGPNGANPHHRPSH---RKIRKGDVVIFDYGAKYLGYCSDVTRTVVVGPPSEEVKKVYEIVKEAQETAVQKVAE-G 282 (377)
T ss_dssp CEEEEGGGGGCTTCCCCS---CBCCTTCEEEEEECEEETTEECCEEEEEESSSCCTHHHHHHHHHHHHHHHHHHHCBT-T
T ss_pred CCCCCCCCCCCCCCCCCC---CCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCC-C
T ss_conf 533456653333566434---331224553344563105755554326898417799997654357788998873068-8
Q ss_pred CCHHHHHHHHHHHHHHCCC--CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCEEEECCCCEEEEEEEE
Q ss_conf 8768999999999998299--98677532234677434579764566899852248998998630022691249998999
Q 005523 555 TPGFVLDAFARSSLWKIGL--DYRHGTGHGVGAALNVHEGPQSISFRYGNMTPLVEGMIVSNEPGYYEDHAFGIRIENLL 632 (692)
Q Consensus 555 ~~~~di~~~a~~~l~~~G~--~~~h~~GHGiG~~l~~hE~P~~i~~~~~~~~~Le~GMv~siEPgiy~~g~~GiriEdtv 632 (692)
+++.+++.++++.+++.|+ ++.|++||||| +++||.|. ++ ++++.+|++|||||||||+|.+|.+|+|+||++
T Consensus 283 ~~~~~i~~~~~~~~~~~g~~~~~~h~~GHgiG--l~~hE~P~-i~--~~~~~~L~~Gmv~tiEPgiy~~g~~GvriEd~v 357 (377)
T 4fkc_A 283 IPAEVVDATARGIISKYGYGEYFIHRTGHGLG--IDVHEEPY-IS--PGNKKILKDGMVFTIEPGIYLQGKFGVRIEDDV 357 (377)
T ss_dssp CBHHHHHHHHHHHHHHTTCTTTCCSCSEEECS--SSSSEEEE-EC--SSCCCBCCTTCEEEECCEEEETTTEEEECBEEE
T ss_pred CCHHHHHHHHHHHHHHHCCCCCCCCCCEEECC--CCCCCCCC-CC--CCCCCEECCCCEEEECCEEEECCCCEEEECCEE
T ss_conf 62135679999999971656647999867178--86366982-15--999988089989998995688993579986699
Q ss_pred EEECCCCCCCCCCCCCCCEEECCCCCCC
Q ss_conf 9941798887898555670681588876
Q 005523 633 YVKEVGTPNRFGGVSYLGFEKLTFVPIQ 660 (692)
Q Consensus 633 lVte~~~~~~~~~~~~lG~E~LT~~P~~ 660 (692)
+||++ |+|.||..|++
T Consensus 358 ~Vt~~------------g~e~Lt~~p~e 373 (377)
T 4fkc_A 358 ALVDK------------KGIRLTNADRE 373 (377)
T ss_dssp EEETT------------EEEESCCSCCS
T ss_pred EEECC------------CCEECCCCCCC
T ss_conf 99899------------81899899987
No 5
>2zsg_A Aminopeptidase P, putative; hydrolase; 1.65A {Thermotoga maritima}
Probab=1.00 E-value=1 Score=500.78 Aligned_cols=345 Identities=28% Similarity=0.393 Sum_probs=305.5
Q ss_pred HHHHHHHHHHHHCCCCEEEECCCCHH-----HHHCCCCCCCCCCCCCEEEEEEEECCCEEEEEECCCCCHHHHHHHHCCC
Q ss_conf 99999999988849989998464114-----4422988999899951146999957936999819999988985411078
Q 005523 254 SKLSSLRSDLVDAGSSAIVISMLDEI-----AWLLNLRGSDVPHSPVMYAYLIVEMDRAKLFVDDSKVTPDVMDHLKNAG 328 (692)
Q Consensus 254 ~Rl~rLr~~L~e~giDaliis~~~ni-----~YLtG~~g~d~p~~Pv~~a~liv~~~~~~Lfvd~~~~~~~v~~~l~~~~ 328 (692)
+|+++||+.|+++++|++|+++++|+ +|||||++.+ ++++|+.+++.||+|.. +..++... .+
T Consensus 2 ~Rl~~Lr~~m~~~~lDa~li~~~~ni~~~~~~YLtGf~~~~--------~~llI~~~~~~L~~d~r-~~~~a~~~---~~ 69 (359)
T 2zsg_A 2 DRSERLIQLISEEGIDAFLIMNIENSARASSVYFSGFTGSF--------SIILISENTRLLITDSR-YTVQAKQE---TD 69 (359)
T ss_dssp CCHHHHHHHHHTTTCCEEEEEESTTTTHHHHHHHHCCCSSC--------EEEEEETTEEEEEECTT-THHHHHHH---CC
T ss_pred HHHHHHHHHHHHCCCCEEEEECHHHCCCCCCEEEECCCCCC--------EEEEEECCCCEEEECCC-CHHHHHHC---CC
T ss_conf 38999999888779969999784671655671676358888--------79999899878998852-27888717---89
Q ss_pred EEEEEC-CC-HHHHHHHHHH--CCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEECCC
Q ss_conf 299735-30-8999999785--5996999189870999999999998866302565655555667788899996100378
Q 005523 329 VELRPY-NS-ILSEIKSLAA--QGAQLWLDPSSVNAAIMNTYEIAIEKYLTSNNNKKSKTKMHTDTTGQSGGPAGVFRTS 404 (692)
Q Consensus 329 v~i~~y-~~-i~~~l~~l~~--~~~~ig~d~~~~s~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~ 404 (692)
+++..| .+ ..+.+.++.. ..+++|+|.+.+++..++.+++.+ ++.++++.++
T Consensus 70 ~~v~~~~~~~~~~~l~~~L~~~~~~~vgvd~~~~~~~~~~~l~~~l------------------------~~~~~v~~~~ 125 (359)
T 2zsg_A 70 FEVREVKGGDFIDVLKKTVNDLKIKTIALEEERVSLSLFRRISSAF------------------------GDRKFIGIDD 125 (359)
T ss_dssp SEEEEC---CCHHHHHHHHHHTTCCEEEECGGGSBHHHHHHHHHHT------------------------TTCEEEECHH
T ss_pred CEEEEECCCCHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHC------------------------CCCEEEECHH
T ss_conf 7799946756699999999856998899948868899999998447------------------------9867998756
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCC
Q ss_conf 53211234899999999999999999999999999998612998799999999999999727999888751342179985
Q 005523 405 PIAFSKAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGFLDTSFDTISGSGANGA 484 (692)
Q Consensus 405 ~I~~lR~iKs~~EIe~lR~A~~i~~~a~~~~~~~l~~~i~~~~G~TE~eia~~l~~~~~~~~G~~~~~f~~iv~sG~n~a 484 (692)
++..+|++||++||+.||+|+++++.++.++++++ +||+||.|+++.++... ...|..+.+|++++++|+|++
T Consensus 126 ~i~~lr~iK~~~Ei~~~r~a~~~~~~~~~~~~~~~------~~G~te~e~~~~~~~~~-~~~g~~~~~f~~iv~~g~~~~ 198 (359)
T 2zsg_A 126 EVKQMRMVKDEGEIEKIKQAIEISERAFLETVQQI------RAGMTEKEIAALLEYTM-RKEGAEGVAFDTIVASGCRSA 198 (359)
T ss_dssp HHHHHHHBCCHHHHHHHHHHHHHHHHHHHHHHTTC------CTTCBHHHHHHHHHHHH-HHTTCSEESSCCEEEEGGGGG
T ss_pred HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHC------CCCCCHHHHHHHHHHHH-HHCCCCCCCCCCEEEECCCCC
T ss_conf 55432447999999999999999999999999866------69987999999999999-986999899887799736546
Q ss_pred CCCCCCCCCCCCCCCCCCEEEEECCEEECCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
Q ss_conf 22346899998634799849996452578868004757876999999999999999999999980078998768999999
Q 005523 485 IIHYKPEPGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFPQSTPGFVLDAFA 564 (692)
Q Consensus 485 ~~h~~p~~~~~r~l~~Gdiv~iD~g~~y~gy~sD~tRT~~~G~p~~~~~~~~~~v~~a~~~~~~~~~P~G~~~~di~~~a 564 (692)
.+|+.|++ ++|++||+|++|+|++|+||++|+|||+++|+|+++++++|+++++++.+++++++| |+++.+++.++
T Consensus 199 ~~h~~~~~---~~l~~gd~v~iD~g~~~~gy~~D~tRt~~~G~~~~~~~~~~~~v~~~~~~~~~~~~p-G~~~~~v~~~~ 274 (359)
T 2zsg_A 199 LPHGKASD---KVVERGDVIVIDFGATYENYCADITRVVSIGEPSDEVKEVHSIVLEAQERALKIAKA-GVTGKLLDSVA 274 (359)
T ss_dssp STTCCCCS---CBCCTTCEEEEEECEEETTEECCEEEEEESSSCCHHHHHHHHHHHHHHHHHHHHCCT-TCBHHHHHHHH
T ss_pred CCCCCCCC---CCCCCCCEEEEEEEEEECCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCC-CCCHHHHHHHH
T ss_conf 35578988---554899989998769989899851689984899999999999999999999997369-89899999999
Q ss_pred HHHHHHCCC--CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCEEEECCCCEEEEEEEEEEECCCCCCC
Q ss_conf 999998299--986775322346774345797645668998522489989986300226912499989999941798887
Q 005523 565 RSSLWKIGL--DYRHGTGHGVGAALNVHEGPQSISFRYGNMTPLVEGMIVSNEPGYYEDHAFGIRIENLLYVKEVGTPNR 642 (692)
Q Consensus 565 ~~~l~~~G~--~~~h~~GHGiG~~l~~hE~P~~i~~~~~~~~~Le~GMv~siEPgiy~~g~~GiriEdtvlVte~~~~~~ 642 (692)
++.+++.|+ +|.|++||||| +++||.|. ++. +++.+|++||||++|||+|.+|++|+|+||+|+||++
T Consensus 275 ~~~~~~~g~~~~~~h~~GHgiG--l~~he~p~-i~~--~~~~~l~~gmv~tiEPgiy~~~~~gvriEd~v~vt~~----- 344 (359)
T 2zsg_A 275 REFIREKGYGEFFGHSLGHGIG--LEVHEGPA-ISF--RNDSPLPENVVFTVEPGIYLEGKFGIRIEEDVVLKEQ----- 344 (359)
T ss_dssp HHHHHHTTCGGGBCSCSEEECS--SSSSEEEE-EST--TCCCBCCTTBEEEECCEEEETTTEEEECBEEEEEETT-----
T ss_pred HHHHHHCCCCCCCCCCCCCCCC--CCCCCCCC-CCC--CCCCCCCCCCEEEECCEEEECCCCEEEEEEEEEECCC-----
T ss_conf 9999976996658999836357--66577987-689--9988869998999979899789867998517999399-----
Q ss_pred CCCCCCCCEEECCCCCCCCC
Q ss_conf 89855567068158887642
Q 005523 643 FGGVSYLGFEKLTFVPIQTK 662 (692)
Q Consensus 643 ~~~~~~lG~E~LT~~P~~~~ 662 (692)
|+|+||..|++..
T Consensus 345 -------g~e~Lt~~~~~l~ 357 (359)
T 2zsg_A 345 -------GCEILTTLPRSIF 357 (359)
T ss_dssp -------EEEECCCSCCSCE
T ss_pred -------CCEECCCCCCCCE
T ss_conf -------4368988986516
No 6
>3biq_A FACT complex subunit SPT16; PITA-bread, aminopeptidase, chromatin, replication, AC chromosomal protein, DNA damage, DNA repair; 1.73A {Saccharomyces cerevisiae} PDB: 3bip_A 3bit_A*
Probab=1.00 E-value=1 Score=495.58 Aligned_cols=384 Identities=13% Similarity=0.150 Sum_probs=321.6
Q ss_pred CCCCCHHHHHHHHHHHHHHH--HCCCCEEEECCCC----HH--------HHHCCCCCCCCCCCCCEEEEEEEECCCEEEE
Q ss_conf 12244219999999999988--8499899984641----14--------4422988999899951146999957936999
Q 005523 245 LKYAGLDVASKLSSLRSDLV--DAGSSAIVISMLD----EI--------AWLLNLRGSDVPHSPVMYAYLIVEMDRAKLF 310 (692)
Q Consensus 245 ~~f~g~e~~~Rl~rLr~~L~--e~giDaliis~~~----ni--------~YLtG~~g~d~p~~Pv~~a~liv~~~~~~Lf 310 (692)
..++++++.+|+++||+.|+ ++|+|++||++++ |+ +|||||++.. ++++|+.++++||
T Consensus 6 ~~~~~~~~~~Rl~~Lr~~m~~~~~giDa~li~~~~~~~~~~y~~~~~~~~yLtGf~~~~--------~~lvVt~d~~~L~ 77 (467)
T 3biq_A 6 LNIDFDVFKKRIELLYSKYNEFEGSPNSLLFVLGSSNAENPYQKTTILHNWLLSYEFPA--------TLIALVPGKVIII 77 (467)
T ss_dssp -CCCHHHHHHHHHHHHHHGGGSTTCCSEEEEEECSCCTTSTTCHHHHHHHHHHSSCCSS--------EEEEEETTEEEEE
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHCCCCCC--------EEEEEECCEEEEE
T ss_conf 56699999999999999977641589889997488777877765143223855899887--------8999979958999
Q ss_pred EECCCC--CHHHHH--HHH--CCCEEEEEC--C------CHHHHHHHHHH-CCCEEEEE-CCCCCHHHHHHHHHHHHHHH
Q ss_conf 819999--988985--411--078299735--3------08999999785-59969991-89870999999999998866
Q 005523 311 VDDSKV--TPDVMD--HLK--NAGVELRPY--N------SILSEIKSLAA-QGAQLWLD-PSSVNAAIMNTYEIAIEKYL 374 (692)
Q Consensus 311 vd~~~~--~~~v~~--~l~--~~~v~i~~y--~------~i~~~l~~l~~-~~~~ig~d-~~~~s~~~~~~L~~~~~~~~ 374 (692)
+|..+. ...+.. ++. ...+++..| . ...+.|.++.. .+++||++ .+.++...++.|.+.+....
T Consensus 78 ~d~~~~~y~~~a~~~~e~~~~~~~v~v~~~~~~~~~~~~~~~~~L~~~L~~~~~~Igv~~~~~~s~~~~~~L~~~l~~~~ 157 (467)
T 3biq_A 78 TSSAKAKHLQKAIDLFKDPESKITLELWQRNNKEPELNKKLFDDVIALINSAGKTVGIPEKDSYQGKFMTEWNPVWEAAV 157 (467)
T ss_dssp EEHHHHHHHHHHHGGGCC--CCCEEEEEEECTTCHHHHHHHHHHHHHHHHHHCSEEEECTTCCCCSHHHHHHHHHHHHHH
T ss_pred ECCCCHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHHHC
T ss_conf 88753678998765224666787738998035653334035999999998629878896675532368999999987411
Q ss_pred HHCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
Q ss_conf 30256565555566778889999610037853211234899999999999999999999999999998612998799999
Q 005523 375 TSNNNKKSKTKMHTDTTGQSGGPAGVFRTSPIAFSKAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDV 454 (692)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~I~~lR~iKs~~EIe~lR~A~~i~~~a~~~~~~~l~~~i~~~~G~TE~ei 454 (692)
. .++.++++..++|..+|++||++||+.||+|+++++.++.+++++++..+..+.|+||.|+
T Consensus 158 ~------------------~~~~~lv~~~~~i~~lr~iK~~~Ei~~~r~A~~i~~~a~~~~~~~i~~~i~~g~g~te~el 219 (467)
T 3biq_A 158 K------------------ENEFNVIDISLGLSKVWEVKDVNEQAFLSVSSKGSDKFMDLLSNEMVRAVDEELKITNAKL 219 (467)
T ss_dssp H------------------HHTCEEEECHHHHHHHTCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCBHHHH
T ss_pred C------------------CCCCEEECHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH
T ss_conf 3------------------4885364248899999766999999999999999999999999973421256589569999
Q ss_pred HHHHHHHHHHH----CC-------------C----CCCCCCEEEEECCCCC-CCCCCCCCCCCCCCCCCCEEEEECCEEE
Q ss_conf 99999999972----79-------------9----9888751342179985-2234689999863479984999645257
Q 005523 455 ADKLLEFRSKQ----SG-------------F----LDTSFDTISGSGANGA-IIHYKPEPGKCSVVDSKKLFLLDSGAQY 512 (692)
Q Consensus 455 a~~l~~~~~~~----~G-------------~----~~~~f~~iv~sG~n~a-~~h~~p~~~~~r~l~~Gdiv~iD~g~~y 512 (692)
++.++..+.+. .| + .+.+|++|+++|+|++ .+|+.|++ ++|++||+|++|+|++|
T Consensus 220 ~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~f~~iv~~G~n~~~~~H~~~~~---~~l~~gd~v~iD~g~~~ 296 (467)
T 3biq_A 220 SDKIENKIDDVKFLKQLSPDLSALCPPNYKFNFDLLDWTYSPIIQSGKKFDLRVSARSTN---DQLYGNGCILASCGIRY 296 (467)
T ss_dssp HHHHHHGGGCHHHHHHHHHHHHTTSCTTCCCCGGGEEESSCCEEECTTCCCCSTTCCCCS---SBCCCSEEEEEEECEEE
T ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEECCCCCC---CCCCCCCEEEEEEEEEE
T ss_conf 999999998523443277432222333235773113578787477558866462169998---76689998999984898
Q ss_pred CCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHC-CCCCCCCHHHHHHHHHHHHHHCC--C--CCCCCCCCCCCCCC
Q ss_conf 8868004757876999999999999999999999980-07899876899999999999829--9--98677532234677
Q 005523 513 VDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQA-IFPQSTPGFVLDAFARSSLWKIG--L--DYRHGTGHGVGAAL 587 (692)
Q Consensus 513 ~gy~sD~tRT~~~G~p~~~~~~~~~~v~~a~~~~~~~-~~P~G~~~~di~~~a~~~l~~~G--~--~~~h~~GHGiG~~l 587 (692)
+||++|+||||++| |+++++++|+++++++.+++++ ++| |+++.+|+.++++++++.| + +|.|++||||| +
T Consensus 297 ~gy~sD~tRT~~~g-~~~~~~~~~~~v~~a~~~~~~~~~~p-G~~~~~v~~~~~~~~~~~g~g~~~~~~h~~GHgiG--l 372 (467)
T 3biq_A 297 NNYCSNITRTFLID-PSEEMANNYDFLLTLQKEIVTNILKP-GRTPKEVYESVIEYIEKTKPELVPNFTKNIGSLIG--L 372 (467)
T ss_dssp TTEECCEEEEEEES-CCHHHHHHHHHHHHHHHHHHHHTCCT-TCCHHHHHHHHHHHHHHHCGGGGGGBCSCCEEECS--S
T ss_pred CCEEEEEEEEEEEC-CCHHHHHHHHHHHHHHHHHHHHCCCC-CCCHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCC--C
T ss_conf 97986016999957-99999999999999999999827769-89699999999999997184343437778556566--6
Q ss_pred CCCCCCCCCCCCCCC-CCCCCCCCEEEECCEEE-E-----CCCCEEEEEEEEEEE--CCCCCCCCCCCCCCCEEECC-CC
Q ss_conf 434579764566899-85224899899863002-2-----691249998999994--17988878985556706815-88
Q 005523 588 NVHEGPQSISFRYGN-MTPLVEGMIVSNEPGYY-E-----DHAFGIRIENLLYVK--EVGTPNRFGGVSYLGFEKLT-FV 657 (692)
Q Consensus 588 ~~hE~P~~i~~~~~~-~~~Le~GMv~siEPgiy-~-----~g~~GiriEdtvlVt--e~~~~~~~~~~~~lG~E~LT-~~ 657 (692)
++||.|..++. ++ +.+|++||||++|||+| . +|.+|+|+||+|+|| ++ |+|+|| .+
T Consensus 373 ~~hE~p~~~~~--~~~~~~l~~Gmv~tiEPgiy~~~~~~~~g~~gvriEd~v~Vt~~~~------------G~e~Lt~~~ 438 (467)
T 3biq_A 373 EFRDSNFILNV--KNDYRKIQRGDCFNISFGFNNLKDSQSANNYALQLADTVQIPLDET------------EPPRFLTNY 438 (467)
T ss_dssp SSCCGGGBSST--TCCSCCCCTTCEEEEEEEEEEECCSSCSSCEEEEEEEEEECCSSTT------------SCCEESCCS
T ss_pred CCCCCCCCCCC--CCCCCCCCCCCEEEEECEEEEEECCCCCCCCEEEEEEEEEEECCCC------------CCEEECCCC
T ss_conf 52468766799--9888863899899995868841348778851799978999915899------------757706557
Q ss_pred CCCCCCHHHCCCCHHHHH
Q ss_conf 876420101039998899
Q 005523 658 PIQTKLVDLSLLSAAEID 675 (692)
Q Consensus 658 P~~~~li~~~l~~~~e~~ 675 (692)
|++...|+..|++++|-+
T Consensus 439 p~~~~~i~~~~~~~~e~~ 456 (467)
T 3biq_A 439 TKAKSQISFYFNNEEEDN 456 (467)
T ss_dssp CCCHHHHEECC-------
T ss_pred CCCHHHHHHHHHCCCCCC
T ss_conf 888999999970666666
No 7
>1wn1_A Dipeptidase; prolidase, cobalt(II), structural genomics, riken structural genomics/proteomics initiative, RSGI, hydrolase; 2.25A {Pyrococcus horikoshii} PDB: 2how_A
Probab=1.00 E-value=1 Score=494.79 Aligned_cols=344 Identities=22% Similarity=0.249 Sum_probs=297.1
Q ss_pred HHHHHHHHHHHHCCCCEEEECCCCHHHHHCCCCCCCCCCCCCEEEEEEEECCC-EEEEEECCCCCHHHHHHHHCCCEEEE
Q ss_conf 99999999988849989998464114442298899989995114699995793-69998199999889854110782997
Q 005523 254 SKLSSLRSDLVDAGSSAIVISMLDEIAWLLNLRGSDVPHSPVMYAYLIVEMDR-AKLFVDDSKVTPDVMDHLKNAGVELR 332 (692)
Q Consensus 254 ~Rl~rLr~~L~e~giDaliis~~~ni~YLtG~~g~d~p~~Pv~~a~liv~~~~-~~Lfvd~~~~~~~v~~~l~~~~v~i~ 332 (692)
+|++++|+.|+++++|++|+++++|++||||+++. +++.+ .++++++.++ ++||++..+.. .+.. +++.
T Consensus 1 ~R~~~l~~~m~~~~~d~~li~~~~n~~yltG~~~~-~~~~~--~~~l~i~~~~~~~l~~~~~~~~-~~~~------~~v~ 70 (356)
T 1wn1_A 1 MRLEKFIHLLGERGFDGALISPGTNLYYLTGLRLH-EVGER--LAILAVSAEGDYRFLAPSLYEN-VVNN------FPAT 70 (356)
T ss_dssp CHHHHHHHHHHHTTCSEEEECSSHHHHHHHCCCCS-CCTTS--CCEEEEETTSCEEEEEEGGGTT-TTTT------SCEE
T ss_pred CHHHHHHHHHHHCCCCEEEECCCCCCEEECCCCCC-CCCCC--EEEEEEECCCCEEEEECCCCHH-HHHC------CEEE
T ss_conf 97999999888789969998897552661388679-98985--0899996899189998910589-8617------8499
Q ss_pred ECC---CHHHHHHHHH----HCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEECCCC
Q ss_conf 353---0899999978----559969991898709999999999988663025656555556677888999961003785
Q 005523 333 PYN---SILSEIKSLA----AQGAQLWLDPSSVNAAIMNTYEIAIEKYLTSNNNKKSKTKMHTDTTGQSGGPAGVFRTSP 405 (692)
Q Consensus 333 ~y~---~i~~~l~~l~----~~~~~ig~d~~~~s~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~ 405 (692)
+|. ...+.+.++. ...+++|+| +.++...++.|.+. ++.++++++++
T Consensus 71 ~~~~~~~~~~~l~~~l~~~~~~~~~i~~~-~~~~~~~~~~l~~~-------------------------~~~~~~~~~~~ 124 (356)
T 1wn1_A 71 FWHDGENPYAKLREILEELGISKGRILIE-DTMRADWLIGIMKL-------------------------GKFTFQPLSSL 124 (356)
T ss_dssp EECTTSCHHHHHHHHHHHTTCSSEEEEEC-TTSBHHHHHHHGGG-------------------------SCEEEEETHHH
T ss_pred EECCCCCHHHHHHHHHHHHCCCCCEEEEE-CCCCHHHHHHHHCC-------------------------CCCEEEECHHH
T ss_conf 97177777999999999725788779994-77689999999707-------------------------89769885899
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCC
Q ss_conf 32112348999999999999999999999999999986129987999999999999997279998887513421799852
Q 005523 406 IAFSKAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGFLDTSFDTISGSGANGAI 485 (692)
Q Consensus 406 I~~lR~iKs~~EIe~lR~A~~i~~~a~~~~~~~l~~~i~~~~G~TE~eia~~l~~~~~~~~G~~~~~f~~iv~sG~n~a~ 485 (692)
+..+|++||++||+.||+|+++++.++.++++++ +||+||.|+++.++....+. +.+.+|++++++|+|++.
T Consensus 125 i~~~R~iK~~~Ei~~~r~A~~i~~~a~~~~~~~i------~~G~te~el~~~~~~~~~~~--~~~~~f~~iv~~g~n~~~ 196 (356)
T 1wn1_A 125 IKELRMIKDKEEVKMMEHASRIADKVFEEILTWD------LIGMKERELALKIELLIREL--SDGIAFEPIVASGENAAN 196 (356)
T ss_dssp HHHHHTSCCHHHHHHHHHHHHHHHHHHHHHTTSC------CTTCBHHHHHHHHHHHHHHH--SSEESSCCEEEEGGGGGC
T ss_pred HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHC------CCCCCHHHHHHHHHHHHHHH--CCCCCCCCEEEEECCCCC
T ss_conf 9999867999999999999999999999999876------69982999999999999971--757899857998143136
Q ss_pred CCCCCCCCCCCCCCCCCEEEEECCEEECCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
Q ss_conf 23468999986347998499964525788680047578769999999999999999999999800789987689999999
Q 005523 486 IHYKPEPGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFPQSTPGFVLDAFAR 565 (692)
Q Consensus 486 ~h~~p~~~~~r~l~~Gdiv~iD~g~~y~gy~sD~tRT~~~G~p~~~~~~~~~~v~~a~~~~~~~~~P~G~~~~di~~~a~ 565 (692)
+|+.|++ ++|++||+|++|+|++|+||++|+||||++|+|+++++++|+++++++.+++++++| |+++.+++.+++
T Consensus 197 ~H~~~~~---~~l~~gd~v~iD~g~~~~gy~sD~tRT~~vG~~~~~~~~~~~~v~~a~~~~~~~~~p-G~~~~~i~~~~~ 272 (356)
T 1wn1_A 197 PHHEPGE---RKIRKGDIIILDYGARWKGYCSDITRTIGLGELDERLVKIYEVVKDAQESAFKAVRE-GIKAKDVDSRAR 272 (356)
T ss_dssp TTCCCCS---CBCCTTCEEEEEECEEETTEECCEEEEEESSSCCHHHHHHHHHHHHHHHHHHHHCBT-TSBHHHHHHHHH
T ss_pred CCCCCCC---CEECCCCEEEEEEEEEECCEEECCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCC-CCCHHHHHHHHH
T ss_conf 5578888---730699979999999889897411799975899999999999999999999998369-892999999999
Q ss_pred HHHHHCCC--CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCEEEECCCCEEEEEEEEEEECCCCCCCC
Q ss_conf 99998299--9867753223467743457976456689985224899899863002269124999899999417988878
Q 005523 566 SSLWKIGL--DYRHGTGHGVGAALNVHEGPQSISFRYGNMTPLVEGMIVSNEPGYYEDHAFGIRIENLLYVKEVGTPNRF 643 (692)
Q Consensus 566 ~~l~~~G~--~~~h~~GHGiG~~l~~hE~P~~i~~~~~~~~~Le~GMv~siEPgiy~~g~~GiriEdtvlVte~~~~~~~ 643 (692)
+.+++.|+ +|.|++||||| +++||.|. ++ ++++.+|++||||++|||+|.+|.+|+|+||+|+||++
T Consensus 273 ~~~~~~g~~~~~~h~~GHgiG--l~~he~p~-i~--~~~~~~l~~Gmv~tiEPgiy~~g~~gvriEd~v~Vt~~------ 341 (356)
T 1wn1_A 273 EVISKAGYGEYFIHRTGHGLG--LDVHEEPY-IG--PDGEVILKNGMTFTIEPGIYVPGLGGVRIEDDIVVDEG------ 341 (356)
T ss_dssp HHHHTTTCGGGCCSCSEEECS--SSSSEEEE-ES--TTCCCBCCTTCEEEECCEEEETTTEEEECBEEEEEETT------
T ss_pred HHHHHCCCCCCCCCCCCCCCC--CCCCCCCC-CC--CCCCCCCCCCCEEEECCEEEECCCCEEEEEEEEEEECC------
T ss_conf 999986996658999704277--75577862-37--99998848998999999458679847999507999099------
Q ss_pred CCCCCCCEEECCCCCCCCC
Q ss_conf 9855567068158887642
Q 005523 644 GGVSYLGFEKLTFVPIQTK 662 (692)
Q Consensus 644 ~~~~~lG~E~LT~~P~~~~ 662 (692)
|+|+||.+|++..
T Consensus 342 ------g~e~Lt~~p~~l~ 354 (356)
T 1wn1_A 342 ------KGRRLTKAERELI 354 (356)
T ss_dssp ------EEEESCCCCCSCC
T ss_pred ------CCEECCCCCCCCE
T ss_conf ------1378989997625
No 8
>1wy2_A XAA-Pro dipeptidase; structural genomics, prolidase, riken structural genomics/PR initiative, RSGI, hydrolase; 1.70A {Pyrococcus horikoshii} PDB: 1pv9_A
Probab=1.00 E-value=1 Score=490.08 Aligned_cols=341 Identities=23% Similarity=0.271 Sum_probs=300.5
Q ss_pred HHHHHHHHHHHHHCCCCEEEECCCCHHHHHCCCCCCCCCCCCCEEEE-EEEECCCEEEEEECCCCCHHHHHHHHCCCEEE
Q ss_conf 99999999998884998999846411444229889998999511469-99957936999819999988985411078299
Q 005523 253 ASKLSSLRSDLVDAGSSAIVISMLDEIAWLLNLRGSDVPHSPVMYAY-LIVEMDRAKLFVDDSKVTPDVMDHLKNAGVEL 331 (692)
Q Consensus 253 ~~Rl~rLr~~L~e~giDaliis~~~ni~YLtG~~g~d~p~~Pv~~a~-liv~~~~~~Lfvd~~~~~~~v~~~l~~~~v~i 331 (692)
.+|++++|+.|+++|+|++++++++|++|||||++.+ .++ ++++.++..+|++... ... ... ..+++
T Consensus 5 ~~R~~~l~~~m~~~~~da~li~~~~n~~yltg~~~~~-------~~~~llv~~~~~~l~~~~~~--~~~-~~~--~~~~v 72 (351)
T 1wy2_A 5 NEKVKKIIEFMDKNSIDAVLIAKNPNVYYISGASPLA-------GGYILITGESATLYVPELEY--EMA-KEE--SNIPV 72 (351)
T ss_dssp CHHHHHHHHHHHHTTCSEEEECSHHHHHHHHSCCCSS-------CCEEEEETTEEEEEEEHHHH--HHH-HHH--CSSCE
T ss_pred HHHHHHHHHHHHHCCCCEEEECCCCCCEEECCCCCCC-------CCEEEEEECCCCEEEECCHH--HHH-HHC--CCCEE
T ss_conf 9999999998877899899989977756714899888-------85899997997699989668--998-625--89749
Q ss_pred EECCCHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCC
Q ss_conf 73530899999978559969991898709999999999988663025656555556677888999961003785321123
Q 005523 332 RPYNSILSEIKSLAAQGAQLWLDPSSVNAAIMNTYEIAIEKYLTSNNNKKSKTKMHTDTTGQSGGPAGVFRTSPIAFSKA 411 (692)
Q Consensus 332 ~~y~~i~~~l~~l~~~~~~ig~d~~~~s~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~I~~lR~ 411 (692)
..|+.+ +.+.++....+++|+| +.+++..++.|++.+ +..+++++++++..+|+
T Consensus 73 ~~~~~~-~~l~~~l~~~~~ig~e-~~~~~~~~~~l~~~~------------------------~~~~~~~~~~~i~~~r~ 126 (351)
T 1wy2_A 73 EKFKKM-DEFYKALEGIKSLGIE-SSLPYGFIEELKKKA------------------------NIKEFKKVDDVIRDMRI 126 (351)
T ss_dssp EEESSH-HHHHHHHTTCSEEEEC-TTCBHHHHHHHHHHS------------------------CCCEEEECHHHHHHHHT
T ss_pred EEECCH-HHHHHHHCCCCEEEEC-CCCCHHHHHHHHHHC------------------------CCCEEEECHHHHHHHHH
T ss_conf 984869-9999997369889994-767999999998648------------------------98768885898999996
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCC
Q ss_conf 48999999999999999999999999999986129987999999999999997279998887513421799852234689
Q 005523 412 VKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGFLDTSFDTISGSGANGAIIHYKPE 491 (692)
Q Consensus 412 iKs~~EIe~lR~A~~i~~~a~~~~~~~l~~~i~~~~G~TE~eia~~l~~~~~~~~G~~~~~f~~iv~sG~n~a~~h~~p~ 491 (692)
+||++||+.||+|+++++.++..+++++ +||+||.|+++.++... ...|..+.+|++++++|+|++.+|+.|+
T Consensus 127 iK~~~Ei~~~r~A~~i~~~a~~~~~~~i------~~G~te~el~~~~~~~~-~~~g~~~~~f~~iv~~g~n~~~~H~~~~ 199 (351)
T 1wy2_A 127 IKSEKEIKIIEKACEIADKAVMAAIEEI------TEGKKEREVAAKVEYLM-KMNGAEKPAFDTIIASGYRSALPHGVAS 199 (351)
T ss_dssp SCCHHHHHHHHHHHHHHHHHHHHHHHHC------CTTCBHHHHHHHHHHHH-HHTTCSEESSCCEEEEGGGGGSTTCBCC
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHC------CCCCCHHHHHHHHHHHH-HHCCCCCCCCCCEEEECCCCCCCCCCCC
T ss_conf 7999999999999999999999999866------49985999999999999-9769987898988997500035567887
Q ss_pred CCCCCCCCCCCEEEEECCEEECCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHC
Q ss_conf 99986347998499964525788680047578769999999999999999999999800789987689999999999982
Q 005523 492 PGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKI 571 (692)
Q Consensus 492 ~~~~r~l~~Gdiv~iD~g~~y~gy~sD~tRT~~~G~p~~~~~~~~~~v~~a~~~~~~~~~P~G~~~~di~~~a~~~l~~~ 571 (692)
+ +++++||++++|+|++|+||++|+|||+++|+|+++++++|+++++++.+++++++| |+++++++.++++.+++.
T Consensus 200 ~---~~l~~gd~v~iD~G~~~~gy~sD~tRT~~vG~~~~~~~~~~~~v~~a~~~~~~~~~p-G~~~~~v~~~~~~~~~~~ 275 (351)
T 1wy2_A 200 D---KRIERGDLVVIDLGALYQHYNSDITRTIVVGSPNEKQKEIYEIVLEAQKKAVESAKP-GITAKELDSIARNIIAEY 275 (351)
T ss_dssp S---CBCCTTCEEEEEECEEETTEECCEEEEEESSCCCHHHHHHHHHHHHHHHHHHHHCCT-TCBHHHHHHHHHHHHHHT
T ss_pred C---CCCCCCCEEEEEEEEEECCEEECCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCC-CCCHHHHHHHHHHHHHHC
T ss_conf 8---663799989999878899998524689986999999999999999999999997279-895999999999999976
Q ss_pred CC--CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCEEEECCCCEEEEEEEEEEECCCCCCCCCCCCCC
Q ss_conf 99--9867753223467743457976456689985224899899863002269124999899999417988878985556
Q 005523 572 GL--DYRHGTGHGVGAALNVHEGPQSISFRYGNMTPLVEGMIVSNEPGYYEDHAFGIRIENLLYVKEVGTPNRFGGVSYL 649 (692)
Q Consensus 572 G~--~~~h~~GHGiG~~l~~hE~P~~i~~~~~~~~~Le~GMv~siEPgiy~~g~~GiriEdtvlVte~~~~~~~~~~~~l 649 (692)
|+ +|.|++||||| +++||.|. ++ ++++.+|++||||++|||+|.+|.+|+|+||+|+|| +
T Consensus 276 g~~~~~~h~~GHgiG--l~~hE~p~-i~--~~~~~~l~~Gmv~tiEPgiy~~g~~gvriEd~v~Vt-~------------ 337 (351)
T 1wy2_A 276 GYGEYFNHSLGHGVG--LEVHEWPR-VS--QYDETVLREGMVITIEPGIYIPKIGGVRIEDTILIT-K------------ 337 (351)
T ss_dssp TCGGGCCSCSEEECS--SSSSEEEE-ES--TTCCCBCCTTCEEEECCEEEETTTEEEECBEEEEEE-T------------
T ss_pred CCCCCCCCCCCCCCC--CCCCCCCC-CC--CCCCCCCCCCCEEEECCEEEECCCCEEEEEEEEEEC-C------------
T ss_conf 996658999511368--77577976-58--999988489999999997785798769995289999-9------------
Q ss_pred CEE-ECCCCCCC
Q ss_conf 706-81588876
Q 005523 650 GFE-KLTFVPIQ 660 (692)
Q Consensus 650 G~E-~LT~~P~~ 660 (692)
|+| +||..|++
T Consensus 338 G~e~~Lt~~p~~ 349 (351)
T 1wy2_A 338 NGSKRLTKTERE 349 (351)
T ss_dssp TEEEESCCSCSC
T ss_pred CCEECCCCCCCC
T ss_conf 965527799855
No 9
>4b28_A Metallopeptidase, family M24, putative; lyase, imethylsulfonioproionate, acrylate, dimethylsulfide; 2.15A {Roseobacter denitrificans och 114}
Probab=1.00 E-value=1 Score=489.78 Aligned_cols=363 Identities=18% Similarity=0.137 Sum_probs=300.9
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHCCCCCCC--CCCCCCEEEEEEEECCCEEEEEECCCCCHHHH
Q ss_conf 1122442199999999999888499899984641144422988999--89995114699995793699981999998898
Q 005523 244 ALKYAGLDVASKLSSLRSDLVDAGSSAIVISMLDEIAWLLNLRGSD--VPHSPVMYAYLIVEMDRAKLFVDDSKVTPDVM 321 (692)
Q Consensus 244 ~~~f~g~e~~~Rl~rLr~~L~e~giDaliis~~~ni~YLtG~~g~d--~p~~Pv~~a~liv~~~~~~Lfvd~~~~~~~v~ 321 (692)
...+...++.+|+++||+.|+++|+|++||++++|++|||||++.+ .+++|. ++++|+.++..+|+|... .+...
T Consensus 71 ~~p~~~~~~~~Rl~rlr~~m~~~glDalli~~~~ni~YlTGf~g~~~~~~~~~~--~~llV~~dg~~~l~d~r~-~~~l~ 147 (470)
T 4b28_A 71 DLPDLAAMRRFRHRRLTDHVVARGYAGLLMFDPLNIRYATDSTNMQLWNTHNPF--RATLLCADGYMVMWDYKN-SPFLS 147 (470)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHTTCSEEEECSHHHHHHHHCCCSSHHHHHHSCC--CEEEEETTSCEEEECCTT-CGGGG
T ss_pred CCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCEEECCCCCCCCCCCCCCC--EEEEEECCCCEEEEECCH-HHHHH
T ss_conf 899869999999999999999769999998687766442598877654567877--799997899879995221-66664
Q ss_pred HHHHCCCEEEEEC--------------------CCHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 5411078299735--------------------30899999978559969991898709999999999988663025656
Q 005523 322 DHLKNAGVELRPY--------------------NSILSEIKSLAAQGAQLWLDPSSVNAAIMNTYEIAIEKYLTSNNNKK 381 (692)
Q Consensus 322 ~~l~~~~v~i~~y--------------------~~i~~~l~~l~~~~~~ig~d~~~~s~~~~~~L~~~~~~~~~~~~~~~ 381 (692)
..... .-+++++ +.+.+.|+++....++||+|.. ++..++.|++
T Consensus 148 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~igve~~--~~~~~~~L~~------------- 211 (470)
T 4b28_A 148 EFNPL-VREQRAGADLFYFDRGDKVDVAADVFANEVRILLRDHAPGLRRLAVDKV--MLHGLRALQA------------- 211 (470)
T ss_dssp TTCTT-SCEEECCCCCSHHHHGGGHHHHHHHHHHHHHHHHHHHSTTCCEEEESSC--CHHHHHHHHH-------------
T ss_pred HHHHH-HHHHHHCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCC--HHHHHHHHHC-------------
T ss_conf 20168-9998752871553157630000024899999999971766754610732--1999999972-------------
Q ss_pred CCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC-----CHHHHHH
Q ss_conf 55555667788899996100378532112348999999999999999999999999999986129987-----9999999
Q 005523 382 SKTKMHTDTTGQSGGPAGVFRTSPIAFSKAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKL-----TEVDVAD 456 (692)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~vd~~~~I~~lR~iKs~~EIe~lR~A~~i~~~a~~~~~~~l~~~i~~~~G~-----TE~eia~ 456 (692)
++.+++++++++..+|+|||++||+.||+|+++++.++.++++++ ++|+ ||.|+++
T Consensus 212 -------------~~~~~vd~~~~v~~lR~iKs~~EI~~mr~A~~i~~~a~~~~~~~i------~pG~~~~~~tE~el~~ 272 (470)
T 4b28_A 212 -------------QGFEIMDGEEVTEKARSVKGPDEIRAMRCASHACEVAVRKMEDFA------RSKVGDGVTCENDIWA 272 (470)
T ss_dssp -------------TTCEEEEHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHHHHHHHH------HHHTTSSCCBHHHHHH
T ss_pred -------------CCCEEEECHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH------HCCCCCCCCCHHHHHH
T ss_conf -------------898799868999999857999999999999999999999999997------5477789989999999
Q ss_pred HHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCEE-ECCEEEEEEEEEECC--CCCHHHH
Q ss_conf 9999999727999888751342179985223468999986347998499964525-788680047578769--9999999
Q 005523 457 KLLEFRSKQSGFLDTSFDTISGSGANGAIIHYKPEPGKCSVVDSKKLFLLDSGAQ-YVDGTTDITRTVHFG--EPTAREK 533 (692)
Q Consensus 457 ~l~~~~~~~~G~~~~~f~~iv~sG~n~a~~h~~p~~~~~r~l~~Gdiv~iD~g~~-y~gy~sD~tRT~~~G--~p~~~~~ 533 (692)
.++.... ..|.. .+|++|+++|+|++.+|+.|++ ++|++||+|++|+|++ |+||++|+||||++| +|+++++
T Consensus 273 ~l~~~~~-~~G~~-~~~~~ivasG~n~~~~H~~~~~---~~l~~Gd~vliD~G~~g~~GY~sDitRT~~vG~~~~s~~~~ 347 (470)
T 4b28_A 273 ILHSENV-RRGGE-WIETRLLASGPRSNPWFQECGP---RVCQRNEIISFDTDLVGAYGICTDISRSWWIGDQKPRADMI 347 (470)
T ss_dssp HHHHHHH-TTTCC-EESCCCEEEGGGGSSTTCCCCS---CBCCSSEEEEEECCEECGGGCEECCEEEEEESSSCCCHHHH
T ss_pred HHHHHHH-HCCCC-CCCCCEEEECCCCCCCCCCCCC---CCCCCCCEEEEEECCCCCCEEEEEEEEEEEECCCCCCHHHH
T ss_conf 9999999-85998-6777536776765667799998---34159998999725421580797137899979989999999
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-----CCCCCCCCC
Q ss_conf 999999999999998007899876899999999999829998677532234677434579764566-----899852248
Q 005523 534 ECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLDYRHGTGHGVGAALNVHEGPQSISFR-----YGNMTPLVE 608 (692)
Q Consensus 534 ~~~~~v~~a~~~~~~~~~P~G~~~~di~~~a~~~l~~~G~~~~h~~GHGiG~~l~~hE~P~~i~~~-----~~~~~~Le~ 608 (692)
++|+++++++.+++++++| |+++.+|+.++++++++.|..+.|++||||| + +||.|. |+.. ++++.+|++
T Consensus 348 ~~y~~v~~a~~a~i~~ikp-G~~~~di~~~ar~~i~~~~~~~~~~~GHGIG--l-~HE~P~-i~~~~~~~~~~~~~~L~~ 422 (470)
T 4b28_A 348 YAMQHGVEHIRTNMEMLKP-GVMIPELSANTHVLDAKFQKQKYGCLMHGVG--L-CDEWPL-VAYPDHAVAGAYDYPLEP 422 (470)
T ss_dssp HHHHHHHHHHHHHHHTCCT-TCBHHHHHHTCCCCCHHHHTTCCSCSEEEES--S-SEEEEE-ECCTTTCCTTSSCCBCCT
T ss_pred HHHHHHHHHHHHHHHHCCC-CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCC--C-CCCCCC-CCCCCCCCCCCCCCEECC
T ss_conf 9999999999999987269-9979999999999999860438897667898--6-888783-567544466899899899
Q ss_pred CCEEEECCEEEE-CCCCEEEEEEEEEEECCCCCCCCCCCCCCCEEECCCCCCCCCCHHH
Q ss_conf 998998630022-6912499989999941798887898555670681588876420101
Q 005523 609 GMIVSNEPGYYE-DHAFGIRIENLLYVKEVGTPNRFGGVSYLGFEKLTFVPIQTKLVDL 666 (692)
Q Consensus 609 GMv~siEPgiy~-~g~~GiriEdtvlVte~~~~~~~~~~~~lG~E~LT~~P~~~~li~~ 666 (692)
|||||+|||+|. +|.+|+|+||+|+||++ |+|+||.+|++..+|..
T Consensus 423 GMV~tiEPgiy~~~g~~GvriEd~vlVte~------------G~e~LT~~p~~l~li~~ 469 (470)
T 4b28_A 423 GMTLCVEALISEEGGDFSIKLEDQVLITED------------GYENLTKYPFDPALMGV 469 (470)
T ss_dssp TCEEEEEEEEECTTCSCEEEEEEEEEECSS------------SEEECCCCCCCHHHHC-
T ss_pred CCEEEECCEEECCCCCEEEEEEEEEEEECC------------CCEECCCCCCCHHHCCC
T ss_conf 988998486163899479998349999299------------48689899973776047
No 10
>1kp0_A Creatine amidinohydrolase; alpha betal, 3-layer(ABA) sandwich; 2.70A {Actinobacillus} SCOP: c.55.2.1 d.127.1.1
Probab=1.00 E-value=1 Score=488.90 Aligned_cols=367 Identities=16% Similarity=0.120 Sum_probs=311.7
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHCCCCCCCCCCCCCEEEEEEEECCCEEEEEECCCCCHHHHHH
Q ss_conf 11224421999999999998884998999846411444229889998999511469999579369998199999889854
Q 005523 244 ALKYAGLDVASKLSSLRSDLVDAGSSAIVISMLDEIAWLLNLRGSDVPHSPVMYAYLIVEMDRAKLFVDDSKVTPDVMDH 323 (692)
Q Consensus 244 ~~~f~g~e~~~Rl~rLr~~L~e~giDaliis~~~ni~YLtG~~g~d~p~~Pv~~a~liv~~~~~~Lfvd~~~~~~~v~~~ 323 (692)
+..|+..++.+|+++||+.|+++++|++|+++++|++|||||++++. .+| ++++|+.+++.||+|..+... ....
T Consensus 16 ~~~~~~~e~~~Rl~~Lr~~m~~~~lDa~li~~~~ni~yltgf~~s~~-~~p---~~llV~~~~~~l~~~~~~~~~-a~~~ 90 (402)
T 1kp0_A 16 YTPFSZAEMTRRZBRLRAWMAKSBIDAVLFTSYHNINYYSGWLYCYF-GRK---YAZVIBZVKAVTISKGIDGGM-PWRR 90 (402)
T ss_dssp CCSSCHHHHHHHHHHHHHHHHHHTCSEEEECSHHHHHHHHSCCCCCT-TCC---CEEEECSSCEEEEEEGGGTTH-HHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCEEECCCCCCCC-CCE---EEEEEECCCCEEEECCCHHHH-HHHH
T ss_conf 89989999999999999999877998999837877568558777777-762---899990799879944100004-5775
Q ss_pred HHCCCEEEEEC--CCHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEE
Q ss_conf 11078299735--3089999997855996999189870999999999998866302565655555667788899996100
Q 005523 324 LKNAGVELRPY--NSILSEIKSLAAQGAQLWLDPSSVNAAIMNTYEIAIEKYLTSNNNKKSKTKMHTDTTGQSGGPAGVF 401 (692)
Q Consensus 324 l~~~~v~i~~y--~~i~~~l~~l~~~~~~ig~d~~~~s~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vd 401 (692)
+....+.+.+| ....+.+.++...++++|+|.+.+++..++.+++.+ ++.++++
T Consensus 91 ~~~~~v~~~~~~~~~~~~~l~~~l~~~~~igvd~~~~~~~~~~~l~~~l------------------------~~~~~v~ 146 (402)
T 1kp0_A 91 SFGBNIVYTDWKRDNFYSAVKKLVKGAKZIGIEHDHVTLBHRRZLZKAL------------------------PGTEFVD 146 (402)
T ss_dssp CSSEEEEECSSSTTHHHHHHHHHHTTCSEEEECTTTCBHHHHHHHHHHS------------------------TTCEEEE
T ss_pred CCCCCEEECCCCCCCHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHC------------------------CCCEEEE
T ss_conf 5576367236566689999999866687799942878999999999768------------------------9987887
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHC--CC-CCC--CCCEE
Q ss_conf 37853211234899999999999999999999999999998612998799999999999999727--99-988--87513
Q 005523 402 RTSPIAFSKAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQS--GF-LDT--SFDTI 476 (692)
Q Consensus 402 ~~~~I~~lR~iKs~~EIe~lR~A~~i~~~a~~~~~~~l~~~i~~~~G~TE~eia~~l~~~~~~~~--G~-~~~--~f~~i 476 (692)
..+++..+|++||++||+.||+|+++++.++.++++++ ++|+||.|+++.+++...+.. ++ ... .++++
T Consensus 147 ~~~~i~~lR~iKs~~Ei~~~r~A~~i~~~a~~~~~~~i------~~G~te~el~~~~~~~~~~~g~~~~~~~~~~~~~~i 220 (402)
T 1kp0_A 147 VGZPVMWZRVIKSSEEZBLIRZGARISDIGGAATAAAI------SAGVPEYEVAIATTBAMVRZIARBFPYVELMDTWIW 220 (402)
T ss_dssp CHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHHHHHHHC------CTTCBHHHHHHHHHHHHHHHHHHHSSSCEEEEEEEE
T ss_pred CHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH------CCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCE
T ss_conf 79999999972999999999999999999999999984------589819999999999999851325676444676604
Q ss_pred EEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCEEECCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf 42179985223468999986347998499964525788680047578769999999999999999999999800789987
Q 005523 477 SGSGANGAIIHYKPEPGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFPQSTP 556 (692)
Q Consensus 477 v~sG~n~a~~h~~p~~~~~r~l~~Gdiv~iD~g~~y~gy~sD~tRT~~~G~p~~~~~~~~~~v~~a~~~~~~~~~P~G~~ 556 (692)
+++|+|++.+|+.|++ ++|++||+|++|+|++|+||++|+||||++|+|+++++++|+++++++.+++++++| |++
T Consensus 221 v~~g~n~~~~H~~~~~---~~l~~gd~v~iD~g~~~~gy~sD~tRT~~~G~~~~~~~~~~~~v~~a~~~~~~~~~p-G~~ 296 (402)
T 1kp0_A 221 FQSGINTDGAHNPVTB---RVVZRGDILSLNCFPMIFGYYTALERTLFLZZVBDASLZIWZKNTAVHRRGLZLIKP-GAR 296 (402)
T ss_dssp EEEGGGGGSTTCCEEC---CBCCTTCEEEEEEEEEETTEECCEEEEEEESCCCHHHHHHHHHHHHHHHHHHHHCCT-TCB
T ss_pred EECCCCCCCCCCCCCC---CCCCCCCEEEEEEEEEECCEEEECEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCC-CCC
T ss_conf 5113343556689888---566899989999876489796305899986899999999999999999999997279-896
Q ss_pred HHHHHHHHHHHHHHCCCC--CCCCCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCCEEEECCEEEEC----CCCEEEE
Q ss_conf 689999999999982999--867753223467743457976456--68998522489989986300226----9124999
Q 005523 557 GFVLDAFARSSLWKIGLD--YRHGTGHGVGAALNVHEGPQSISF--RYGNMTPLVEGMIVSNEPGYYED----HAFGIRI 628 (692)
Q Consensus 557 ~~di~~~a~~~l~~~G~~--~~h~~GHGiG~~l~~hE~P~~i~~--~~~~~~~Le~GMv~siEPgiy~~----g~~Giri 628 (692)
+++|+.++++.+++.|+. +.|++||||| +++||.|..++. .++++.+|++||||++|||+|.+ +.+|+|+
T Consensus 297 ~~~i~~~~~~~~~~~G~~~~~~~~~GHgiG--~~~He~~~~~g~~~~~~~~~~l~~Gmv~tiEPgiy~~~~~~~~~G~ri 374 (402)
T 1kp0_A 297 CKDIASELNBMYRZWDLLRYRTFGYGHSFG--VLBHYYGREAGVELREDIZTVLEPGMVVSMEPMVMBPEGEPGAGGYRE 374 (402)
T ss_dssp HHHHHHHHHHHHHHTTCGGGBCSCSCBBCE--EEETTEECCTTCBCCTTCCCBCCTTCEEEECCEEEECTTSTTCEEEEC
T ss_pred HHHHHHHHHHHHHHCCCCEECCCCCCCCCC--CCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCEEECCCCCCCCCEEE
T ss_conf 999999999999984997206878666668--766657765674447889972489968998891440676677885799
Q ss_pred EEEEEEECCCCCCCCCCCCCCCEEECCCCCCCCCC
Q ss_conf 89999941798887898555670681588876420
Q 005523 629 ENLLYVKEVGTPNRFGGVSYLGFEKLTFVPIQTKL 663 (692)
Q Consensus 629 EdtvlVte~~~~~~~~~~~~lG~E~LT~~P~~~~l 663 (692)
||+++||++ |+|+||.+|+++++
T Consensus 375 ed~v~Vt~~------------g~e~Lt~~p~~~~~ 397 (402)
T 1kp0_A 375 HDILVIKEN------------BTENITGFPFGPEH 397 (402)
T ss_dssp BEEEEEETT------------EEEECCCSCCSTTT
T ss_pred EEEEEECCC------------CCEECCCCCCCHHH
T ss_conf 878999399------------64589899996687
Done!