BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 005531
(692 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255542378|ref|XP_002512252.1| 5'->3' exoribonuclease, putative [Ricinus communis]
gi|223548213|gb|EEF49704.1| 5'->3' exoribonuclease, putative [Ricinus communis]
Length = 964
Score = 1157 bits (2992), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 559/692 (80%), Positives = 609/692 (88%), Gaps = 3/692 (0%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPAFYRWLADRYPL+IVDVVEE+P+ D GV P+D+SKPNPNG+EFDNLYLDMNGII
Sbjct: 1 MGVPAFYRWLADRYPLAIVDVVEEEPKEDSNGVIGPIDISKPNPNGLEFDNLYLDMNGII 60
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPCFHPDGKP P +YDDVFKSIFDYIDH+F LVRPRKLL++AIDGVAPRAKMNQQR+RRF
Sbjct: 61 HPCFHPDGKPPPPTYDDVFKSIFDYIDHLFTLVRPRKLLFMAIDGVAPRAKMNQQRSRRF 120
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQ 180
RAAKDAAEAEAEEERLRKEFE GKLLS KEKPET DSNVITPGTQFMAVLS LQY++Q
Sbjct: 121 RAAKDAAEAEAEEERLRKEFEAEGKLLSPKEKPETSDSNVITPGTQFMAVLSTGLQYYVQ 180
Query: 181 ARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
RLN PGW++TKVILSDANVPGEGEHK+MSYIRLQRNL GF+PNTRHCLYGLDADLIML
Sbjct: 181 MRLNHNPGWKYTKVILSDANVPGEGEHKVMSYIRLQRNLSGFNPNTRHCLYGLDADLIML 240
Query: 241 SLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIHKK 300
+LATHEIHFSILRE++T PGQQEKCF CGQ GHLAA+C GKPGDNP DWN DD PIHKK
Sbjct: 241 ALATHEIHFSILREMVTFPGQQEKCFSCGQTGHLAADCRGKPGDNPLDWNVEDDVPIHKK 300
Query: 301 KYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGA 360
KYQFLNIWVLREYLQYELD+PNPP INFERI+DDFVFLCFFVGNDFLPHMPTLEIREGA
Sbjct: 301 KYQFLNIWVLREYLQYELDVPNPPLEINFERILDDFVFLCFFVGNDFLPHMPTLEIREGA 360
Query: 361 INLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYEYNEA 420
INLLMHVYRREF+AMGGYLTDAGEV LDRVE FIQSVA+YE+QIFQKRTRIQQ E NE
Sbjct: 361 INLLMHVYRREFSAMGGYLTDAGEVNLDRVEHFIQSVAIYEEQIFQKRTRIQQFLENNEE 420
Query: 421 MKLNARRESSEELLQAPVAVADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYV 480
M+L ARRESSEE +Q P D VKLGEPGYKERYYA+KF ++ P+EIDKV+ DVVLKYV
Sbjct: 421 MRLKARRESSEE-IQTP--AVDKVKLGEPGYKERYYAEKFGLTTPDEIDKVRNDVVLKYV 477
Query: 481 EGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPA 540
EGLCWVCRYYYQ VCSWQWFYPYHYAPFASDLK L+DLEITFFLGEPF+PFDQLMGTLPA
Sbjct: 478 EGLCWVCRYYYQGVCSWQWFYPYHYAPFASDLKGLADLEITFFLGEPFKPFDQLMGTLPA 537
Query: 541 ASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKK 600
ASS+ALPE+YR LMTD SSPI +F+P DF+IDMNGKRFAWQG+ KLPFIDE+ LL QTKK
Sbjct: 538 ASSNALPEEYRKLMTDSSSPISRFFPLDFEIDMNGKRFAWQGIAKLPFIDERKLLAQTKK 597
Query: 601 LEVFLTEEELFRNSVMLDLLYVHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVNASGGM 660
LE LTEEE RNSVMLDLLYVHP HP+ ++ + Q ++ LP R W ID NAS GM
Sbjct: 598 LESTLTEEERLRNSVMLDLLYVHPAHPMAAEVIAHYQGFNSLPQYQRKPWAIDTNASAGM 657
Query: 661 NGYIWLCERNGLRSIIPSPVKGLPDIERNQAM 692
NGY+WL ERN RS I SPV G PDIE NQ +
Sbjct: 658 NGYLWLSERNMWRSTIASPVNGFPDIEHNQVL 689
>gi|224131346|ref|XP_002328516.1| predicted protein [Populus trichocarpa]
gi|222838231|gb|EEE76596.1| predicted protein [Populus trichocarpa]
Length = 948
Score = 1147 bits (2966), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 553/692 (79%), Positives = 614/692 (88%), Gaps = 3/692 (0%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPAFYRWLADRYPLSIVDV+EE+PQ D G ++P+DVSKPNPNG+E+DNLYLDMNGII
Sbjct: 1 MGVPAFYRWLADRYPLSIVDVIEEEPQEDSNGNSKPIDVSKPNPNGIEYDNLYLDMNGII 60
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPCFHP+GKPAP +YDDVFKSIF YIDH+F LVRPRKLL++AIDGVAPRAKMNQQR+RRF
Sbjct: 61 HPCFHPEGKPAPATYDDVFKSIFVYIDHLFALVRPRKLLFMAIDGVAPRAKMNQQRSRRF 120
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQ 180
RAAKDAA+AEAEEERLRKEFE G LLS KEKPET DSNVITPGTQFMAVLS ALQY+IQ
Sbjct: 121 RAAKDAAQAEAEEERLRKEFEAEGVLLSVKEKPETRDSNVITPGTQFMAVLSIALQYYIQ 180
Query: 181 ARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
+RLN PGWQ TKVILSDANVPGEGEHKIMSYIRLQRN+PGF+ NTRHCLYGLDADLIML
Sbjct: 181 SRLNHNPGWQNTKVILSDANVPGEGEHKIMSYIRLQRNIPGFNSNTRHCLYGLDADLIML 240
Query: 241 SLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIHKK 300
SLATHE+HFSILRE++ PGQQ+KCF+CGQ GHLAAEC GK GD+ DWN VDDTPIHKK
Sbjct: 241 SLATHEVHFSILREMVIFPGQQDKCFLCGQAGHLAAECRGKQGDDALDWNVVDDTPIHKK 300
Query: 301 KYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGA 360
KYQFLNIWVLREYLQY+LDIPNPPF I+FE+IVDDFVF+CFFVGNDFLPHMPTLEIREGA
Sbjct: 301 KYQFLNIWVLREYLQYDLDIPNPPFAIDFEKIVDDFVFMCFFVGNDFLPHMPTLEIREGA 360
Query: 361 INLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYEYNEA 420
INLLMH+YRREF+AMGGYLT AGEV LD+VE FIQSVAVYE+QIFQKR RIQQA+E NE
Sbjct: 361 INLLMHIYRREFSAMGGYLTLAGEVFLDKVEHFIQSVAVYEEQIFQKRARIQQAFENNEE 420
Query: 421 MKLNARRESSEELLQAPVAVADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYV 480
MK ARR+ SEE+ PV D VKLGEPGYKERYYA+KF++SN EEIDKV KDVVLKYV
Sbjct: 421 MKHKARRDLSEEIQAPPV---DKVKLGEPGYKERYYAEKFDLSNEEEIDKVTKDVVLKYV 477
Query: 481 EGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPA 540
EGLCWVCRYYYQ VCSWQWFYPYHYAPFASD+KDL ++EITFFLGEPF+PFDQLMGTLPA
Sbjct: 478 EGLCWVCRYYYQGVCSWQWFYPYHYAPFASDIKDLDEMEITFFLGEPFKPFDQLMGTLPA 537
Query: 541 ASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKK 600
ASS+ALPE+YR LMTDPSSPI++F+P DF+IDMNGKRFAWQG+ KLPFIDE+ LL QTKK
Sbjct: 538 ASSNALPEEYRKLMTDPSSPIHQFFPSDFEIDMNGKRFAWQGIAKLPFIDERKLLAQTKK 597
Query: 601 LEVFLTEEELFRNSVMLDLLYVHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVNASGGM 660
LE L EEE RNSVM DLLYVHP HPL QQ+ Y ++LP +R A +ID ASGGM
Sbjct: 598 LERTLMEEEQVRNSVMRDLLYVHPVHPLSQQVISYYHHNYRLPVSERIALKIDTRASGGM 657
Query: 661 NGYIWLCERNGLRSIIPSPVKGLPDIERNQAM 692
NGY+WL ERN RS++PSP+ GLP +E NQ +
Sbjct: 658 NGYLWLSERNVWRSVVPSPINGLPTLEYNQVL 689
>gi|224123332|ref|XP_002319052.1| predicted protein [Populus trichocarpa]
gi|222857428|gb|EEE94975.1| predicted protein [Populus trichocarpa]
Length = 965
Score = 1128 bits (2917), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 546/692 (78%), Positives = 612/692 (88%), Gaps = 3/692 (0%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPAFYR LADRYPLSI DV+EE+PQ D G ++P+DVSKPNPNG+EFDNLYLDMNGII
Sbjct: 1 MGVPAFYRLLADRYPLSISDVIEEEPQEDSNGNSKPIDVSKPNPNGIEFDNLYLDMNGII 60
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPCFHP+GKPAP +YDDVFKSIF YIDH+F LVRPRKLL++AIDGVAPRAKMNQQR+RRF
Sbjct: 61 HPCFHPEGKPAPATYDDVFKSIFAYIDHLFALVRPRKLLFMAIDGVAPRAKMNQQRSRRF 120
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQ 180
RAAKDAA+AEAEEERLRKEFE G+LLS KEKPET DSNVITPGTQFMA LS ALQY+IQ
Sbjct: 121 RAAKDAAQAEAEEERLRKEFEAEGELLSVKEKPETFDSNVITPGTQFMAALSTALQYYIQ 180
Query: 181 ARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
+RLN GWQ TKVILSD+NVPGEGEHKIMSYIRLQRNL GF+PNTRHCLY LDADLIML
Sbjct: 181 SRLNHNLGWQNTKVILSDSNVPGEGEHKIMSYIRLQRNLSGFNPNTRHCLYSLDADLIML 240
Query: 241 SLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIHKK 300
SLAT E+HFSILRE++TLPGQQ+KCF+CGQ GHLAAEC GK GD+ DW+ VDDTPIHKK
Sbjct: 241 SLATREVHFSILREIVTLPGQQDKCFLCGQAGHLAAECRGKQGDDALDWHVVDDTPIHKK 300
Query: 301 KYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGA 360
KYQFLNIWVLREYLQY+LDI NPPF I+FERIVDDFVFLCFFVGNDFLPHMPTLEIREGA
Sbjct: 301 KYQFLNIWVLREYLQYDLDILNPPFAIDFERIVDDFVFLCFFVGNDFLPHMPTLEIREGA 360
Query: 361 INLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYEYNEA 420
I+LLMH+YRREF+AMGGYLT AGEV LD+VE FIQ VAVYE+QIFQKRTRIQQA++ NE
Sbjct: 361 ISLLMHIYRREFSAMGGYLTLAGEVFLDKVEHFIQCVAVYEEQIFQKRTRIQQAFDNNEE 420
Query: 421 MKLNARRESSEELLQAPVAVADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYV 480
MKL ARRESS E++QAP V D VKLGEPGYKERYYA+KFE+SN EEIDKV+K+VVLKYV
Sbjct: 421 MKLKARRESS-EVIQAP--VVDKVKLGEPGYKERYYAEKFELSNQEEIDKVRKEVVLKYV 477
Query: 481 EGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPA 540
EGLCWVC YY+Q VCSWQWFYP+HYAPFASDLKDL ++E+ FF+GEPF+PFDQLMGTLPA
Sbjct: 478 EGLCWVCHYYFQGVCSWQWFYPFHYAPFASDLKDLGEVELNFFIGEPFKPFDQLMGTLPA 537
Query: 541 ASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKK 600
ASS+ALP++YR LMT+PSSPI++F+P DF+IDMNGKRFAWQG+ KLPFIDE+ LL QTKK
Sbjct: 538 ASSNALPKEYRKLMTNPSSPIHRFFPSDFEIDMNGKRFAWQGIAKLPFIDERKLLAQTKK 597
Query: 601 LEVFLTEEELFRNSVMLDLLYVHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVNASGGM 660
LE LTEEE RN VMLDLLY+HP HPL Q + Y Q L +RFAWEID ASGGM
Sbjct: 598 LESTLTEEEQIRNRVMLDLLYIHPVHPLAQLVISYYQQNDHLSEGERFAWEIDTRASGGM 657
Query: 661 NGYIWLCERNGLRSIIPSPVKGLPDIERNQAM 692
NG +WL ERN RS++PSP+ GLP +E NQ +
Sbjct: 658 NGCLWLYERNVRRSVVPSPILGLPVLEGNQVL 689
>gi|359487905|ref|XP_002271987.2| PREDICTED: 5'-3' exoribonuclease 4-like [Vitis vinifera]
Length = 950
Score = 1112 bits (2876), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 552/691 (79%), Positives = 602/691 (87%), Gaps = 15/691 (2%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPAFYRWLADRYPL+++DVVEE+P EG A +DVS+PNPNGMEFDNLYLDMNGII
Sbjct: 1 MGVPAFYRWLADRYPLAVMDVVEEEP---SEGGAE-IDVSRPNPNGMEFDNLYLDMNGII 56
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPCFHPDGKPAPT+YDDVFKSIFDYIDH+F LVRPR+LLY+AIDGVAPRAKMNQQR+RRF
Sbjct: 57 HPCFHPDGKPAPTTYDDVFKSIFDYIDHLFSLVRPRRLLYMAIDGVAPRAKMNQQRSRRF 116
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQ 180
RAAKDAAEAEAEEERLRKEFE GK+LS KEKPET DSNVITPGT+FMAVLS ALQY+I
Sbjct: 117 RAAKDAAEAEAEEERLRKEFEVEGKMLSPKEKPETSDSNVITPGTKFMAVLSVALQYYIH 176
Query: 181 ARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
+RLN+ PGW TKVILSD+NVPGEGEHKIMSYIR QRNL GF+PNTRHCLYGLDADLIML
Sbjct: 177 SRLNRNPGWCSTKVILSDSNVPGEGEHKIMSYIRSQRNLLGFNPNTRHCLYGLDADLIML 236
Query: 241 SLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIHKK 300
SLATHE+HFSILRE+IT PGQQEKC++CGQVGHLAAEC G VDDTPIHKK
Sbjct: 237 SLATHEVHFSILREMITPPGQQEKCYLCGQVGHLAAECRG--------IEVVDDTPIHKK 288
Query: 301 KYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGA 360
KYQFLNIWVLREYLQY+L+I NPPF INFER++DDFVFLCFFVGNDFLPHMPTLEIREGA
Sbjct: 289 KYQFLNIWVLREYLQYDLEILNPPFEINFERLLDDFVFLCFFVGNDFLPHMPTLEIREGA 348
Query: 361 INLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYEYNEA 420
INLLMHVYRREF+AMGGYLTDAGEVLLDRVE FI+SVAVYEDQIFQKRTRIQQA E NE
Sbjct: 349 INLLMHVYRREFSAMGGYLTDAGEVLLDRVEHFIESVAVYEDQIFQKRTRIQQALENNEE 408
Query: 421 MKLNARRESSEELLQAPVAVADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYV 480
MKL +RE+SEE +AP V D VKLGEPGYKERYY +KF +SNPEEIDKV+K++V+KYV
Sbjct: 409 MKLRTKREASEE-PRAP--VEDKVKLGEPGYKERYYTEKFNLSNPEEIDKVRKEIVMKYV 465
Query: 481 EGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPA 540
EGLCWVCRYYYQ VCSWQW+YP+HYAPFASDLKDL DLEITFFLGEPF+PFDQLMGTLPA
Sbjct: 466 EGLCWVCRYYYQGVCSWQWYYPFHYAPFASDLKDLVDLEITFFLGEPFKPFDQLMGTLPA 525
Query: 541 ASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKK 600
AS+S+LPE YR LMTD SSPI FYP DF+IDMNGKR+AWQGV KLPFIDE+ LL +TKK
Sbjct: 526 ASASSLPENYRKLMTDQSSPILDFYPSDFEIDMNGKRYAWQGVAKLPFIDEEKLLAETKK 585
Query: 601 LEVFLTEEELFRNSVMLDLLYVHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVNASGGM 660
LEV LT EE RNSVM DLLYVH HPL QI Y Y PP R W ID+NASGGM
Sbjct: 586 LEVTLTVEEQVRNSVMFDLLYVHAVHPLATQIIYYYHFYQSSPPLARVIWPIDINASGGM 645
Query: 661 NGYIWLCERNGLRSIIPSPVKGLPDIERNQA 691
NGY+WLCERNG RS PS + GL +IE NQ
Sbjct: 646 NGYLWLCERNGWRSEFPSSISGLQNIEHNQV 676
>gi|15221841|ref|NP_175851.1| 5'-3' exoribonuclease 4 [Arabidopsis thaliana]
gi|75262833|sp|Q9FQ04.1|XRN4_ARATH RecName: Full=5'-3' exoribonuclease 4; AltName: Full=Protein ACC
INSENSITIVE 1; AltName: Full=Protein ETHYLENE
INSENSITIVE 5; AltName: Full=Protein EXORIBONUCLEASE 4
gi|11875626|gb|AAG40731.1|AF286718_1 XRN4 [Arabidopsis thaliana]
gi|17381112|gb|AAL36368.1| putative exonuclease [Arabidopsis thaliana]
gi|20259665|gb|AAM14350.1| putative exonuclease [Arabidopsis thaliana]
gi|109627646|gb|ABG34298.1| At1g54490 [Arabidopsis thaliana]
gi|332194988|gb|AEE33109.1| 5'-3' exoribonuclease 4 [Arabidopsis thaliana]
Length = 947
Score = 1101 bits (2848), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 534/692 (77%), Positives = 599/692 (86%), Gaps = 7/692 (1%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPAFYRWLADRYP SI DVVEE+P G G PVD+++PNPNG EFDNLYLDMNGII
Sbjct: 1 MGVPAFYRWLADRYPKSISDVVEEEPTDGGRGDLIPVDITRPNPNGFEFDNLYLDMNGII 60
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPCFHP+GKPAP +YDDVFKS+F+YIDH+F LVRPRK+LYLAIDGVAPRAKMNQQR+RRF
Sbjct: 61 HPCFHPEGKPAPATYDDVFKSMFEYIDHLFTLVRPRKILYLAIDGVAPRAKMNQQRSRRF 120
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQ 180
RAAKDAAEAEAEEERLRK+FE G++LSAKEK ETCDSNVITPGT FMA+LS ALQY+IQ
Sbjct: 121 RAAKDAAEAEAEEERLRKDFEMEGQILSAKEKAETCDSNVITPGTPFMAILSVALQYYIQ 180
Query: 181 ARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
+RLN PGW++ KVILSD+NVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML
Sbjct: 181 SRLNHNPGWRYVKVILSDSNVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
Query: 241 SLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIHKK 300
SLATHE+HFSILREVIT PGQQEKCFVCGQ GH A++C GK G N N D PIHKK
Sbjct: 241 SLATHEVHFSILREVITYPGQQEKCFVCGQTGHFASDCPGKSGSN----NAAADIPIHKK 296
Query: 301 KYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGA 360
KYQFLNIWVLREYLQYEL IP+PPF INFERI+DDFVFLCFFVGNDFLPHMPTLEIREGA
Sbjct: 297 KYQFLNIWVLREYLQYELAIPDPPFMINFERIIDDFVFLCFFVGNDFLPHMPTLEIREGA 356
Query: 361 INLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYEYNEA 420
INLLMHVYR+EFTAMGGYLTD+GEVLLDRVE FIQ+VAV ED+IFQKRTRI+Q+ + NE
Sbjct: 357 INLLMHVYRKEFTAMGGYLTDSGEVLLDRVEHFIQAVAVNEDKIFQKRTRIKQSMDNNEE 416
Query: 421 MKLNARRESSEELLQAPVAVADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYV 480
MK +RR+ SE P + D +KLGEPGYKERYYA+KF +NPEE +++K+D+VLKYV
Sbjct: 417 MKQRSRRDPSE---VPPEPIDDKIKLGEPGYKERYYAEKFSTTNPEETEQIKQDMVLKYV 473
Query: 481 EGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPA 540
EGLCWVCRYYYQ VCSWQWFYPYHYAPFASDLK+L DLEITFF+GEPF+PFDQLMGTLPA
Sbjct: 474 EGLCWVCRYYYQGVCSWQWFYPYHYAPFASDLKNLPDLEITFFIGEPFKPFDQLMGTLPA 533
Query: 541 ASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKK 600
ASS+ALP +YR LMTDPSSPI KFYP DF++DMNGKRFAWQG+ KLPFI+EKLLL T+K
Sbjct: 534 ASSNALPGEYRKLMTDPSSPILKFYPADFELDMNGKRFAWQGIAKLPFIEEKLLLAATRK 593
Query: 601 LEVFLTEEELFRNSVMLDLLYVHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVNASGGM 660
LE LT EE RNSVMLDLLYVHP HPL Q+I Y Y +PP + W ID N+S GM
Sbjct: 594 LEETLTVEEQQRNSVMLDLLYVHPAHPLGQRILQYYHFYQHMPPHECLPWMIDPNSSQGM 653
Query: 661 NGYIWLCERNGLRSIIPSPVKGLPDIERNQAM 692
NG++W ERNG ++ + SPV GLP IE+N+A+
Sbjct: 654 NGFLWFSERNGFQTRVDSPVNGLPCIEQNRAL 685
>gi|356505926|ref|XP_003521740.1| PREDICTED: 5'-3' exoribonuclease 4-like [Glycine max]
Length = 960
Score = 1095 bits (2831), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 549/697 (78%), Positives = 590/697 (84%), Gaps = 12/697 (1%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPAFYRWLADRYPLSI DVVEE+P V G G VDVSKPNPNGMEFDNLYLDMNGII
Sbjct: 1 MGVPAFYRWLADRYPLSIADVVEEEPSV-GSGA---VDVSKPNPNGMEFDNLYLDMNGII 56
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPCFHPDGK APT+Y+DVFKSIFDYIDHIF LVRPRKLLYLAIDGVAPRAKMNQQR+RRF
Sbjct: 57 HPCFHPDGKSAPTTYEDVFKSIFDYIDHIFSLVRPRKLLYLAIDGVAPRAKMNQQRSRRF 116
Query: 121 RAAKDAAEAEAEE-----ERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAAL 175
RAAKDAAE +A E ERLR+EFE KLLS+K KPET DSNVITPGT FM VLS AL
Sbjct: 117 RAAKDAAEKDAAEAEAEIERLREEFEGEMKLLSSKVKPETYDSNVITPGTPFMGVLSVAL 176
Query: 176 QYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDA 235
QY+IQ RLN PGW+ TKVILSD+NVPGEGEHKIM YIRLQRNLPGF+PNTRHCLYGLDA
Sbjct: 177 QYYIQTRLNYNPGWRNTKVILSDSNVPGEGEHKIMDYIRLQRNLPGFNPNTRHCLYGLDA 236
Query: 236 DLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDT 295
DLIMLSLATHE+HFSILREVIT PGQQEKCF CGQVGH AAEC GKPG+ DWN VDDT
Sbjct: 237 DLIMLSLATHEVHFSILREVITFPGQQEKCFQCGQVGHFAAECRGKPGEKAEDWNPVDDT 296
Query: 296 PIHKKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLE 355
PIHKKKYQFLNIWVLREYLQYE++IPNPPF I+FERIVDDFVFLCFFVGNDFLPHMPTLE
Sbjct: 297 PIHKKKYQFLNIWVLREYLQYEMEIPNPPFEIDFERIVDDFVFLCFFVGNDFLPHMPTLE 356
Query: 356 IREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAY 415
IREGA+NLLMH+YR+EFTAMGGYLT+AGEV L+RVE FIQSVAV+EDQIF KR RIQQA
Sbjct: 357 IREGAVNLLMHIYRKEFTAMGGYLTEAGEVFLERVEHFIQSVAVHEDQIFLKRVRIQQAT 416
Query: 416 EYNEAMKLNARRESSEELLQAPVAVADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDV 475
E NE MK AR E E +V D VKLGEPGYKERYYA+KF + E+I+K+KKD
Sbjct: 417 EINEEMKARARGEMPGE---PRASVLDKVKLGEPGYKERYYAEKFGALDLEKIEKIKKDT 473
Query: 476 VLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLM 535
VLKYVEGLCWVCRYYYQ VCSWQW+YPYHYAPFASDLKDL+DLEITFFLGEPF+PFDQLM
Sbjct: 474 VLKYVEGLCWVCRYYYQGVCSWQWYYPYHYAPFASDLKDLADLEITFFLGEPFKPFDQLM 533
Query: 536 GTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLL 595
GTLPA+SSSALPEKYR+LM DPSSPI +FYP DF+IDMNGKRFAWQGV KLPFIDEK LL
Sbjct: 534 GTLPASSSSALPEKYRDLMIDPSSPILQFYPADFEIDMNGKRFAWQGVAKLPFIDEKKLL 593
Query: 596 RQTKKLEVFLTEEELFRNSVMLDLLYVHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVN 655
T KLE LTEEE RNS MLDLLYV H L I Y Q QLP +R A ID
Sbjct: 594 SATSKLEATLTEEEQLRNSKMLDLLYVSSAHNLAPHILSYHQYSCQLPLHERPALPIDPR 653
Query: 656 ASGGMNGYIWLCERNGLRSIIPSPVKGLPDIERNQAM 692
AS GMNGY+WL ERN LR+ + SP+KGL DIE NQ +
Sbjct: 654 ASDGMNGYLWLYERNVLRTTVSSPIKGLQDIEFNQVL 690
>gi|356573066|ref|XP_003554686.1| PREDICTED: 5'-3' exoribonuclease 4-like [Glycine max]
Length = 957
Score = 1093 bits (2828), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 546/697 (78%), Positives = 589/697 (84%), Gaps = 14/697 (2%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPAFYRWLADRYPLSI DVVEEDP A VDVSKPNP+GMEFDNLYLDMNGII
Sbjct: 1 MGVPAFYRWLADRYPLSITDVVEEDPS------AGAVDVSKPNPSGMEFDNLYLDMNGII 54
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPCFHPDGKPAP +Y+DVFKSIFDYIDHIF LVRPRKLLYLAIDGVAPRAKMNQQR+RRF
Sbjct: 55 HPCFHPDGKPAPATYEDVFKSIFDYIDHIFSLVRPRKLLYLAIDGVAPRAKMNQQRSRRF 114
Query: 121 RAAKDAAEAEAEE-----ERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAAL 175
RAAKDAAE +A E ERLR+EFE KLLS+K+KPET DSNVITPGT FM VLS AL
Sbjct: 115 RAAKDAAEKDAAEAEAEIERLREEFEGEMKLLSSKDKPETYDSNVITPGTPFMGVLSVAL 174
Query: 176 QYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDA 235
QY+IQ RLN PGW TKVILSD+NVPGEGEHKIM YIRLQRNLPGF+PNTRHCLYGLDA
Sbjct: 175 QYYIQTRLNYNPGWWNTKVILSDSNVPGEGEHKIMDYIRLQRNLPGFNPNTRHCLYGLDA 234
Query: 236 DLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDT 295
DLIMLSLATHE+HFSILREVIT PGQQEKCF CGQ+GH AAEC GKPG+ DWN VDDT
Sbjct: 235 DLIMLSLATHEVHFSILREVITFPGQQEKCFQCGQLGHFAAECRGKPGEKAEDWNPVDDT 294
Query: 296 PIHKKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLE 355
PIHKKKYQFLNIWVLREYLQYE++IPNPPF I+FERIVDDFVFLCFFVGNDFLPHMPTLE
Sbjct: 295 PIHKKKYQFLNIWVLREYLQYEMEIPNPPFEIDFERIVDDFVFLCFFVGNDFLPHMPTLE 354
Query: 356 IREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAY 415
IREGA+NLLMH+YR+EFTAMGGYLT+AGEV L+RVE FIQSVAV+EDQIFQKR RIQQA
Sbjct: 355 IREGALNLLMHIYRKEFTAMGGYLTEAGEVFLERVEHFIQSVAVHEDQIFQKRVRIQQAT 414
Query: 416 EYNEAMKLNARRESSEELLQAPVAVADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDV 475
E NE MK AR + E +V D VKLGEPGYKERYYA+KF +PE+IDK+KKD
Sbjct: 415 EINEEMKARARGDMPGE---PRASVLDKVKLGEPGYKERYYAEKFGALDPEKIDKIKKDT 471
Query: 476 VLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLM 535
VLKYVEGLCWVCRYYYQ VCSWQW+YPYHYAPFASDLKDL+DLEITFFLGEPF+PFDQLM
Sbjct: 472 VLKYVEGLCWVCRYYYQGVCSWQWYYPYHYAPFASDLKDLADLEITFFLGEPFKPFDQLM 531
Query: 536 GTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLL 595
GTLPA+SSSALP+KYR+LM DPSS I +FYP DF+IDMNGKRFAWQGV KLPFIDEK LL
Sbjct: 532 GTLPASSSSALPKKYRDLMIDPSSSILQFYPADFEIDMNGKRFAWQGVAKLPFIDEKKLL 591
Query: 596 RQTKKLEVFLTEEELFRNSVMLDLLYVHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVN 655
T KLE LTEEE RNS MLDLLYV H L I Y Q QLP +R A ID
Sbjct: 592 SATSKLEATLTEEEQLRNSKMLDLLYVSSAHNLAPHILSYYQYSCQLPLHERPAQPIDPR 651
Query: 656 ASGGMNGYIWLCERNGLRSIIPSPVKGLPDIERNQAM 692
S GMNGY+WL ERN LR+I+ SP+KGL DIE NQ +
Sbjct: 652 VSDGMNGYLWLYERNVLRTIVSSPIKGLQDIEFNQVL 688
>gi|356576739|ref|XP_003556487.1| PREDICTED: 5'-3' exoribonuclease 4-like [Glycine max]
Length = 931
Score = 1090 bits (2819), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 531/692 (76%), Positives = 590/692 (85%), Gaps = 9/692 (1%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPAFYRWLADRYPLSI DVVEEDP V +GV P+D SKPNPNGMEFDNLYLDMNGII
Sbjct: 1 MGVPAFYRWLADRYPLSIADVVEEDPAVGDDGVPFPIDASKPNPNGMEFDNLYLDMNGII 60
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPCFHPDGKPAP +YDDVFKSIFDY+DH++ LVRPRKLLYLAIDGVAPRAKMNQQR+RRF
Sbjct: 61 HPCFHPDGKPAPATYDDVFKSIFDYLDHLYTLVRPRKLLYLAIDGVAPRAKMNQQRSRRF 120
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQ 180
RAAKDAAEAEAEEERLRKEF+ GK+LS+K+KPET DSNVITPGTQFM LS +LQY+IQ
Sbjct: 121 RAAKDAAEAEAEEERLRKEFQSEGKVLSSKDKPETSDSNVITPGTQFMVALSVSLQYYIQ 180
Query: 181 ARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
RLN P W+ TKVILSD+N PGEGEHKIM YIRLQRNLPGF+PNTRHCLYGLDADLIML
Sbjct: 181 TRLNHNPSWRNTKVILSDSNAPGEGEHKIMEYIRLQRNLPGFNPNTRHCLYGLDADLIML 240
Query: 241 SLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIHKK 300
SLATHE+HFSILREV+TLPGQQ+KCF+CGQ GH AA+C + D P DD+PIHKK
Sbjct: 241 SLATHEVHFSILREVVTLPGQQDKCFLCGQAGHFAADCQAEDFDTP------DDSPIHKK 294
Query: 301 KYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGA 360
KYQFLNIWVLREYLQ+EL+IPNPPF I+FER+VDDFVFLCFFVGNDFLPHMPTLEIREGA
Sbjct: 295 KYQFLNIWVLREYLQFELEIPNPPFEIDFERVVDDFVFLCFFVGNDFLPHMPTLEIREGA 354
Query: 361 INLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYEYNEA 420
INLLMH+YR+EFTA+GGYLTDAGEV LDRV++FIQ V V+EDQIFQKR RIQ A E NE
Sbjct: 355 INLLMHIYRKEFTAIGGYLTDAGEVFLDRVQRFIQFVTVHEDQIFQKRVRIQLAAENNEE 414
Query: 421 MKLNARRESSEELLQAPVAVADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYV 480
M+ AR E E ++ D VKLGEPGYKERYY +KF +SN EEIDK+KKD+VLKYV
Sbjct: 415 MRARARGEMPGE---PRASLLDKVKLGEPGYKERYYVEKFGVSNLEEIDKIKKDIVLKYV 471
Query: 481 EGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPA 540
EGLCWVCRYYYQ VCSW+W+YPYHYAPFASD KDL DLEI FF GEPF+PFDQLMGTLPA
Sbjct: 472 EGLCWVCRYYYQGVCSWKWYYPYHYAPFASDFKDLPDLEINFFPGEPFKPFDQLMGTLPA 531
Query: 541 ASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKK 600
+SSSALP+KYR+LM+DPSSPI+ FYP DF+IDMNGKRFAWQGV KLPFIDEK LL T++
Sbjct: 532 SSSSALPKKYRDLMSDPSSPIFHFYPADFEIDMNGKRFAWQGVAKLPFIDEKKLLAATRR 591
Query: 601 LEVFLTEEELFRNSVMLDLLYVHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVNASGGM 660
+E LTEEE RNSVMLDLLYV+ H L I Y + QLPP +R ID NASGGM
Sbjct: 592 IEDTLTEEEQLRNSVMLDLLYVNRAHNLAAHILSYYHVCSQLPPHERCVQPIDTNASGGM 651
Query: 661 NGYIWLCERNGLRSIIPSPVKGLPDIERNQAM 692
NGY+WLCERN S+I SP+ GL DIE NQ +
Sbjct: 652 NGYLWLCERNVFSSVISSPISGLQDIEYNQVL 683
>gi|4585991|gb|AAD25627.1|AC005287_29 Dhm1- and Dhm2-like protein [Arabidopsis thaliana]
Length = 965
Score = 1077 bits (2785), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 527/692 (76%), Positives = 591/692 (85%), Gaps = 18/692 (2%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPAFYRWLADRYP SI DVVEE+P G G PVD+++PNPNG EFDNLYLDMNGII
Sbjct: 1 MGVPAFYRWLADRYPKSISDVVEEEPTDGGRGDLIPVDITRPNPNGFEFDNLYLDMNGII 60
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPCFHP+GKPAP +YDDVFKS+F+YIDH+F LVRPRK+LYLAIDGVAPRAKMNQQR+RRF
Sbjct: 61 HPCFHPEGKPAPATYDDVFKSMFEYIDHLFTLVRPRKILYLAIDGVAPRAKMNQQRSRRF 120
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQ 180
RAAKDAAEAEAEEERLRK+FE G++LSAKEK ETCDSNVITPGT FMA+LS ALQY+IQ
Sbjct: 121 RAAKDAAEAEAEEERLRKDFEMEGQILSAKEKAETCDSNVITPGTPFMAILSVALQYYIQ 180
Query: 181 ARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
+RLN PGW++ KVILSD+NVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML
Sbjct: 181 SRLNHNPGWRYVKVILSDSNVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
Query: 241 SLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIHKK 300
SLATHE+HFSILREVIT PGQQEKCFVCGQ GH A++C GK G N N D PIHKK
Sbjct: 241 SLATHEVHFSILREVITYPGQQEKCFVCGQTGHFASDCPGKSGSN----NAAADIPIHKK 296
Query: 301 KYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGA 360
KYQFLNIWVLREYLQYEL IP+PPF INFERI+DDFVFLCFFVGNDFLPHMPTLEIREGA
Sbjct: 297 KYQFLNIWVLREYLQYELAIPDPPFMINFERIIDDFVFLCFFVGNDFLPHMPTLEIREGA 356
Query: 361 INLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYEYNEA 420
INLLMHVYR+EFTAMGGYLTD+GEV +RVE FIQ+VAV ED+IFQKRTRI+Q
Sbjct: 357 INLLMHVYRKEFTAMGGYLTDSGEV--NRVEHFIQAVAVNEDKIFQKRTRIKQQ------ 408
Query: 421 MKLNARRESSEELLQAPVAVADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYV 480
+RR+ SE P + D +KLGEPGYKERYYA+KF +NPEE +++K+D+VLKYV
Sbjct: 409 ---RSRRDPSE---VPPEPIDDKIKLGEPGYKERYYAEKFSTTNPEETEQIKQDMVLKYV 462
Query: 481 EGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPA 540
EGLCWVCRYYYQ VCSWQWFYPYHYAPFASDLK+L DLEITFF+GEPF+PFDQLMGTLPA
Sbjct: 463 EGLCWVCRYYYQGVCSWQWFYPYHYAPFASDLKNLPDLEITFFIGEPFKPFDQLMGTLPA 522
Query: 541 ASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKK 600
ASS+ALP +YR LMTDPSSPI KFYP DF++DMNGKRFAWQG+ KLPFI+EKLLL T+K
Sbjct: 523 ASSNALPGEYRKLMTDPSSPILKFYPADFELDMNGKRFAWQGIAKLPFIEEKLLLAATRK 582
Query: 601 LEVFLTEEELFRNSVMLDLLYVHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVNASGGM 660
LE LT EE RNSVMLDLLYVHP HPL Q+I Y Y +PP + W ID N+S GM
Sbjct: 583 LEETLTVEEQQRNSVMLDLLYVHPAHPLGQRILQYYHFYQHMPPHECLPWMIDPNSSQGM 642
Query: 661 NGYIWLCERNGLRSIIPSPVKGLPDIERNQAM 692
NG++W ERNG ++ + SPV GLP IE+N+A+
Sbjct: 643 NGFLWFSERNGFQTRVDSPVNGLPCIEQNRAL 674
>gi|350537227|ref|NP_001233774.1| ethylene insensitive 5/7 [Solanum lycopersicum]
gi|312063753|gb|ADQ27233.1| 5'-3' exoribonuclease 4 [Solanum lycopersicum]
Length = 978
Score = 1077 bits (2784), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 520/692 (75%), Positives = 576/692 (83%), Gaps = 12/692 (1%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPAFYRWLADRYPLSIVD+VEE+P+ D PVD+SKPNPNGMEFDNLYLDMNGII
Sbjct: 1 MGVPAFYRWLADRYPLSIVDMVEEEPKDD-----VPVDISKPNPNGMEFDNLYLDMNGII 55
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPCFHP+GKPAP +Y+DVF SIFDYIDH+F LVRPRKLLY+AIDGVAPRAKMNQQRTRRF
Sbjct: 56 HPCFHPEGKPAPATYNDVFNSIFDYIDHLFSLVRPRKLLYMAIDGVAPRAKMNQQRTRRF 115
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQ 180
RA+KDAAE+EAEE+RLR+EFE +L EKPET DSNVITPGT FMAVLS ALQY+I
Sbjct: 116 RASKDAAESEAEEKRLREEFEMEAAILVPTEKPETSDSNVITPGTPFMAVLSIALQYYIH 175
Query: 181 ARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
+RLN+ GW+FTKVILSDANVPGEGEHKIMSYIRLQRN+PGF+PNTRHCLYGLDADLIML
Sbjct: 176 SRLNKNAGWRFTKVILSDANVPGEGEHKIMSYIRLQRNIPGFNPNTRHCLYGLDADLIML 235
Query: 241 SLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIHKK 300
SLATHE+HFSILREVIT PGQQEKCF CGQVGHLAA CHG G++ D V+DTPIHKK
Sbjct: 236 SLATHEVHFSILREVITPPGQQEKCFACGQVGHLAASCHGTNGNHGKDGKAVNDTPIHKK 295
Query: 301 KYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGA 360
KYQFL+IWVLREYLQY+L+I NPPF I+FER+VDDFVFLCFFVGNDFLPHMPTLEIREGA
Sbjct: 296 KYQFLHIWVLREYLQYDLEIYNPPFQIDFERVVDDFVFLCFFVGNDFLPHMPTLEIREGA 355
Query: 361 INLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYEYNEA 420
INLLM +YRR+FT MGGYLTDAGEV LDRVE FIQ+ AVYEDQIFQKR RIQQ+ E NE
Sbjct: 356 INLLMSIYRRDFTTMGGYLTDAGEVFLDRVEHFIQAAAVYEDQIFQKRARIQQSIENNE- 414
Query: 421 MKLNARRESSEELLQAPVAVADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYV 480
R E Q D VKLGEPGYKERYY++KF +S E+I +V++DVV KY+
Sbjct: 415 ------RVRKEANAQPHPPAEDKVKLGEPGYKERYYSEKFGVSTAEDIHEVRQDVVQKYM 468
Query: 481 EGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPA 540
EGLCWVCRYYYQ VCSWQWFYPYHYAPFASDLK L+DLEITFF GEPF+PFDQLMG LPA
Sbjct: 469 EGLCWVCRYYYQGVCSWQWFYPYHYAPFASDLKGLADLEITFFPGEPFKPFDQLMGVLPA 528
Query: 541 ASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKK 600
AS+ ALPEKYR LM DPSSPI FYP DF++DMNGKRFAWQ VVKLPFIDEK LL +TKK
Sbjct: 529 ASAKALPEKYRMLMMDPSSPISDFYPTDFELDMNGKRFAWQAVVKLPFIDEKKLLAETKK 588
Query: 601 LEVFLTEEELFRNSVMLDLLYVHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVNASGGM 660
LE LT+ E RNSVM DLLYVH H L I Y +P + + W ID N SGGM
Sbjct: 589 LEDTLTDTEQLRNSVMFDLLYVHHHHTLAPYIISYYHHNVMIPSRAQRPWIIDANLSGGM 648
Query: 661 NGYIWLCERNGLRSIIPSPVKGLPDIERNQAM 692
NG+IWL ERNGLR +PSP+ GL DI N+ +
Sbjct: 649 NGFIWLSERNGLRDRVPSPLNGLEDILNNKIL 680
>gi|167861118|gb|ACA05276.1| putative ethylene insensitive 5/7 [Solanum lycopersicum]
Length = 696
Score = 1073 bits (2776), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 520/692 (75%), Positives = 579/692 (83%), Gaps = 12/692 (1%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPAFYRWLADRYPLSIVD+VEE+P+ D PVD+SKPNPNGMEFDNLYLDMNGII
Sbjct: 1 MGVPAFYRWLADRYPLSIVDMVEEEPKDD-----VPVDISKPNPNGMEFDNLYLDMNGII 55
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPCFHP+GKPAP +Y+DVF SIFDYIDH+F LVRPRKLLY+AIDGVAPRAKMNQQRTRRF
Sbjct: 56 HPCFHPEGKPAPATYNDVFNSIFDYIDHLFSLVRPRKLLYMAIDGVAPRAKMNQQRTRRF 115
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQ 180
RA+KDAAE+EAEE+RLR+EFE +L EKPET DSNVITPGT FMAVLS ALQY I
Sbjct: 116 RASKDAAESEAEEKRLREEFEMEAAILVPTEKPETSDSNVITPGTPFMAVLSIALQYNIH 175
Query: 181 ARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
+RLN+ GW+FTKVILSDANVPGEGEHKIMSYIRLQRN+PGF+PNTRHCLYGLDADLIML
Sbjct: 176 SRLNKNAGWRFTKVILSDANVPGEGEHKIMSYIRLQRNIPGFNPNTRHCLYGLDADLIML 235
Query: 241 SLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIHKK 300
SLATHE+HFSILREVIT PGQQEKCF CGQVGHLAA CHG G++ D V+DTPIHKK
Sbjct: 236 SLATHEVHFSILREVITPPGQQEKCFACGQVGHLAASCHGTNGNHGKDGKAVNDTPIHKK 295
Query: 301 KYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGA 360
KYQFL+IWVLREYLQY+L+I NPPF I+FER+VDDFVFLCFFVGNDFLPHMPTLEIREGA
Sbjct: 296 KYQFLHIWVLREYLQYDLEIYNPPFQIDFERVVDDFVFLCFFVGNDFLPHMPTLEIREGA 355
Query: 361 INLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYEYNEA 420
INLLM +YRR+FT MGGYLTDAGEV LDRVE FIQ+ AVYEDQIFQKR RIQQ+ E NE
Sbjct: 356 INLLMSIYRRDFTTMGGYLTDAGEVFLDRVEHFIQAAAVYEDQIFQKRARIQQSIENNER 415
Query: 421 MKLNARRESSEELLQAPVAVADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYV 480
+ R+E++ Q D VKLGEPGYKERYY++KF +S E+I +V++DVV KY+
Sbjct: 416 V----RKEANA---QPHPPAEDKVKLGEPGYKERYYSEKFGVSTAEDIHEVRQDVVQKYM 468
Query: 481 EGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPA 540
EGLCWVCRYYYQ VCSWQWFYPYHYAPFASDLK L+DLEITFF GEPF+PFDQLMG LPA
Sbjct: 469 EGLCWVCRYYYQGVCSWQWFYPYHYAPFASDLKGLADLEITFFPGEPFKPFDQLMGVLPA 528
Query: 541 ASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKK 600
AS+ ALPEKYR LM DPSSPI FYP DF++DMNGKRFAWQ VVKLPFIDEK LL +TKK
Sbjct: 529 ASAKALPEKYRMLMMDPSSPISDFYPTDFELDMNGKRFAWQAVVKLPFIDEKKLLAETKK 588
Query: 601 LEVFLTEEELFRNSVMLDLLYVHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVNASGGM 660
LE LT+ E RNSVM DLLYVH H L I Y +P + + W ID N SGGM
Sbjct: 589 LEDTLTDTEQLRNSVMFDLLYVHHHHTLAPYIISYYHHNVMIPSRAQRPWIIDANLSGGM 648
Query: 661 NGYIWLCERNGLRSIIPSPVKGLPDIERNQAM 692
NG+IWL ERNGLR +PSP+ GL DI N+ +
Sbjct: 649 NGFIWLSERNGLRDRVPSPLNGLEDILNNKIL 680
>gi|357512203|ref|XP_003626390.1| 5'-3' exoribonuclease [Medicago truncatula]
gi|355501405|gb|AES82608.1| 5'-3' exoribonuclease [Medicago truncatula]
Length = 956
Score = 1068 bits (2763), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 537/694 (77%), Positives = 594/694 (85%), Gaps = 8/694 (1%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEE--DPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNG 58
MGVPAFYRWLADRYP SIVDVVEE P V G G PVDVS+PNPNGMEFDNLYLDMNG
Sbjct: 1 MGVPAFYRWLADRYPRSIVDVVEEAPSPSVAG-GPPFPVDVSRPNPNGMEFDNLYLDMNG 59
Query: 59 IIHPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
IIHPCFHPDGKPAP +YDDVFKS+FDYIDH+F LVRPRKLLYLAIDGVAPRAKMNQQR+R
Sbjct: 60 IIHPCFHPDGKPAPATYDDVFKSMFDYIDHLFSLVRPRKLLYLAIDGVAPRAKMNQQRSR 119
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RFRAAKDAAEAEAEEERLR EF + +LL++KEK ET DSNVITPGT FMAVLS ALQY+
Sbjct: 120 RFRAAKDAAEAEAEEERLRNEFADQIELLTSKEKTETHDSNVITPGTPFMAVLSVALQYY 179
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
IQ RLN PGW+ TKV+LSD+NVPGEGEHKIM YIRLQRNLPGFDPNTRHCLYGLDADLI
Sbjct: 180 IQTRLNYNPGWRNTKVMLSDSNVPGEGEHKIMDYIRLQRNLPGFDPNTRHCLYGLDADLI 239
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
MLSLATHEIHFSILREVIT PGQQEKC++CGQVGHLAAEC GKPGDN DW VDDTPIH
Sbjct: 240 MLSLATHEIHFSILREVITFPGQQEKCYMCGQVGHLAAECRGKPGDNALDW-PVDDTPIH 298
Query: 299 KKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIRE 358
KKKYQFL+IWVLREYLQYEL IP+PPF I+FERIVDDFVFLCFFVGNDFLPHMPTLEIRE
Sbjct: 299 KKKYQFLHIWVLREYLQYELLIPDPPFEIDFERIVDDFVFLCFFVGNDFLPHMPTLEIRE 358
Query: 359 GAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYEYN 418
GA+NLLMH+YR+EFTAMGGYLTDAGEV L+RVE FIQ VAV+E+QIFQKR RIQQ+ E+N
Sbjct: 359 GAVNLLMHIYRKEFTAMGGYLTDAGEVFLERVENFIQCVAVHEEQIFQKRVRIQQSQEFN 418
Query: 419 EAMKLNARRESSEELLQAPVAVADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLK 478
E M+ AR E EE +V D VKLG+PGY ERYYA+KF S+P EI+++KKD+VLK
Sbjct: 419 EGMRARARGEMPEE---PRASVVDKVKLGQPGYTERYYAEKFGASDP-EIERIKKDIVLK 474
Query: 479 YVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTL 538
YVEGLCWVCRYYYQ VCSWQW+YPYHYAPFASDLKDL+DLEITFF+GEPFRPFDQLMGTL
Sbjct: 475 YVEGLCWVCRYYYQGVCSWQWYYPYHYAPFASDLKDLADLEITFFMGEPFRPFDQLMGTL 534
Query: 539 PAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQT 598
P++SSSALPE+YR+LM +PSSPI +FYP DF+IDMNGK+++WQGV KLPFIDEK LL T
Sbjct: 535 PSSSSSALPERYRDLMINPSSPILQFYPSDFEIDMNGKKYSWQGVAKLPFIDEKKLLSAT 594
Query: 599 KKLEVFLTEEELFRNSVMLDLLYVHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVNASG 658
+ LE LTEEE RNS MLDLLYV H L I Y Q Y LP Q R ID +AS
Sbjct: 595 RTLEGTLTEEEQLRNSKMLDLLYVSRAHKLVPHILFYYQNYSHLPHQQRPVLPIDPSASD 654
Query: 659 GMNGYIWLCERNGLRSIIPSPVKGLPDIERNQAM 692
GMNG++W ERN R+++ SP+KGL DI NQ +
Sbjct: 655 GMNGFLWSYERNVFRTVVSSPIKGLQDIACNQVL 688
>gi|307136058|gb|ADN33909.1| 5'-3' exoribonuclease [Cucumis melo subsp. melo]
Length = 934
Score = 1062 bits (2746), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 524/692 (75%), Positives = 575/692 (83%), Gaps = 34/692 (4%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPAFYRWLADRYP SI DVVEE+P GV P+DVSKPNPNGMEFDNLYLDMNGII
Sbjct: 1 MGVPAFYRWLADRYPRSIADVVEEEPLDGPNGVLLPIDVSKPNPNGMEFDNLYLDMNGII 60
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPCFHP+GKP P +YD VFKSIFDYIDH+F LVRPRK+LY+AIDGVAPRAKMNQQR+RRF
Sbjct: 61 HPCFHPEGKPPPATYDAVFKSIFDYIDHLFSLVRPRKVLYMAIDGVAPRAKMNQQRSRRF 120
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQ 180
RAAKDAAEAEAEEERLRKEFE G+ L KEKPETCDSNVITPGT+FM VLS ALQY+ Q
Sbjct: 121 RAAKDAAEAEAEEERLRKEFEAEGQTLLPKEKPETCDSNVITPGTEFMGVLSVALQYYAQ 180
Query: 181 ARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
+RLN PGW+FTKVILSD+NVPGEGEHKIM YIRLQRNLPGFDPNTRHCLYGLDADLIML
Sbjct: 181 SRLNHNPGWRFTKVILSDSNVPGEGEHKIMQYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
Query: 241 SLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIHKK 300
SLATHE+HFSILREVI LPGQQEKC+ CG+VGHLAAEC GK D P DWNG D+TPIHKK
Sbjct: 241 SLATHEVHFSILREVIMLPGQQEKCYNCGKVGHLAAECRGK-SDGPEDWNGADETPIHKK 299
Query: 301 KYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGA 360
KYQFLNIWVLREYLQYELDIPNPPF INFERIVDDFVFLCFFVGNDFLPHMPTLEIREGA
Sbjct: 300 KYQFLNIWVLREYLQYELDIPNPPFEINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGA 359
Query: 361 INLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYEYNEA 420
INLLMH+YR+EF A+GGYLTDAGE A E NE
Sbjct: 360 INLLMHIYRKEFPAIGGYLTDAGE-----------------------------AQENNEE 390
Query: 421 MKLNARRESSEELLQAPVAVADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYV 480
M+ ARRES V D +KLGEPGYKERYYA+KF +NP I ++++DVVLKYV
Sbjct: 391 MRGRARRESGPPPPPPTV---DKIKLGEPGYKERYYAEKFN-ANPANIAEIRQDVVLKYV 446
Query: 481 EGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPA 540
EGLCWVCRYYY VCSWQW+YPYHY+PFASDLK+L+DLEITFFLGEPF+PFDQLMGTLPA
Sbjct: 447 EGLCWVCRYYYSGVCSWQWYYPYHYSPFASDLKNLADLEITFFLGEPFKPFDQLMGTLPA 506
Query: 541 ASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKK 600
ASS+ALPEKYRNLMTDPSSPI +FYP DF+IDMNGKRF WQGV KLPFIDE+ LL QT++
Sbjct: 507 ASSTALPEKYRNLMTDPSSPILEFYPSDFEIDMNGKRFLWQGVAKLPFIDERKLLAQTRR 566
Query: 601 LEVFLTEEELFRNSVMLDLLYVHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVNASGGM 660
LE LT+EE RNS+MLDLLY H HPL QI Y Q+ QLPP R W ID NASGGM
Sbjct: 567 LEWSLTDEEKNRNSIMLDLLYTHCTHPLSAQIFSYYQVASQLPPHARTCWVIDTNASGGM 626
Query: 661 NGYIWLCERNGLRSIIPSPVKGLPDIERNQAM 692
NGY+WLCERN +R+++PSP+ GLPDI+ NQ +
Sbjct: 627 NGYLWLCERNVIRNVVPSPIIGLPDIQCNQVL 658
>gi|449442897|ref|XP_004139217.1| PREDICTED: 5'-3' exoribonuclease 4-like [Cucumis sativus]
Length = 934
Score = 1057 bits (2733), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 521/692 (75%), Positives = 573/692 (82%), Gaps = 34/692 (4%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPAFYRWLADRYP SI DVVEE+P GV P+DVSKPNPNGMEFDNLYLDMNGII
Sbjct: 1 MGVPAFYRWLADRYPRSIADVVEEEPVGGPSGVLFPIDVSKPNPNGMEFDNLYLDMNGII 60
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPCFHP+GKP P +YD VFKSIFDYIDH+F LVRPRK+LY+AIDGVAPRAKMNQQR+RRF
Sbjct: 61 HPCFHPEGKPPPATYDAVFKSIFDYIDHLFSLVRPRKVLYMAIDGVAPRAKMNQQRSRRF 120
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQ 180
RAAKDAAEAEAEEERLRKEFE G+ L KEKPETCDSNVITPGT+FM VLS ALQY+ Q
Sbjct: 121 RAAKDAAEAEAEEERLRKEFEAEGQTLLPKEKPETCDSNVITPGTEFMGVLSVALQYYAQ 180
Query: 181 ARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
+RLN PGW+FTKVILSD+NVPGEGEHKIM YIRLQRNLPGFDPNTRHCLYGLDADLIML
Sbjct: 181 SRLNHNPGWRFTKVILSDSNVPGEGEHKIMQYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
Query: 241 SLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIHKK 300
SLATHE+HFSILREVI LPGQQEKC+ CG+VGHLAAEC GK D P DWNG D+TPIHKK
Sbjct: 241 SLATHEVHFSILREVIMLPGQQEKCYNCGKVGHLAAECRGK-SDGPEDWNGADETPIHKK 299
Query: 301 KYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGA 360
KYQFLNIWVLREYLQYELDIPNPPF INFERIVDDFVFLCFFVGNDFLPHMPTLEIREGA
Sbjct: 300 KYQFLNIWVLREYLQYELDIPNPPFEINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGA 359
Query: 361 INLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYEYNEA 420
INLLMH+YR+EF A+GGYLTDAGE A E NE
Sbjct: 360 INLLMHIYRKEFPAIGGYLTDAGE-----------------------------AQENNEE 390
Query: 421 MKLNARRESSEELLQAPVAVADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYV 480
M+ ARRE+ V D +KLGEPGYKERYYA+KF +NP I ++K+DVVLKYV
Sbjct: 391 MRGRARRENGPPPPPPTV---DKIKLGEPGYKERYYAEKFN-ANPANIAEIKQDVVLKYV 446
Query: 481 EGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPA 540
EGLCWVCRYYY VCSWQW+YPYHY+PFASDLK+L+DLEITFF+GEPF+PFDQLMGTLPA
Sbjct: 447 EGLCWVCRYYYSGVCSWQWYYPYHYSPFASDLKNLADLEITFFIGEPFKPFDQLMGTLPA 506
Query: 541 ASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKK 600
ASS+ALPEKYRNLMTDPSSPI +FYP DF+IDMNGKRF WQGV KLPFIDE+ LL QT++
Sbjct: 507 ASSTALPEKYRNLMTDPSSPILEFYPSDFEIDMNGKRFQWQGVAKLPFIDERKLLAQTRR 566
Query: 601 LEVFLTEEELFRNSVMLDLLYVHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVNASGGM 660
LE LT+EE RNSVMLD+LY H HPL QI Y Q+ QLPP R W ID NASGGM
Sbjct: 567 LEWSLTDEEKNRNSVMLDMLYTHCTHPLSAQIFSYYQVASQLPPHARTCWVIDTNASGGM 626
Query: 661 NGYIWLCERNGLRSIIPSPVKGLPDIERNQAM 692
NGY+WLCERN +R+++ SP+ LPDI+ NQ +
Sbjct: 627 NGYLWLCERNVIRNVVQSPINSLPDIQCNQVL 658
>gi|357441511|ref|XP_003591033.1| 5'-3' exoribonuclease [Medicago truncatula]
gi|355480081|gb|AES61284.1| 5'-3' exoribonuclease [Medicago truncatula]
Length = 1029
Score = 1052 bits (2720), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 528/706 (74%), Positives = 585/706 (82%), Gaps = 25/706 (3%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPAFYRWLADRYPLSI DVVE+D V P+D SKPNPNG+EFDNLYLDMNGII
Sbjct: 1 MGVPAFYRWLADRYPLSISDVVEDD------DVPSPIDASKPNPNGIEFDNLYLDMNGII 54
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPCFHPDGKP+P +YD+VFK +FDY+DH+F LVRPRKLLYLA DGVAPRAKMNQQR+RRF
Sbjct: 55 HPCFHPDGKPSPATYDEVFKLVFDYVDHLFSLVRPRKLLYLATDGVAPRAKMNQQRSRRF 114
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQ 180
RAAKDAAEAEAEEERLRKEF E G LLS+K+KPET DSNVITPGT+FMA LS ALQY++Q
Sbjct: 115 RAAKDAAEAEAEEERLRKEFVEEGALLSSKDKPETSDSNVITPGTKFMASLSVALQYYVQ 174
Query: 181 ARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
RLN P W+ KVILSD+NVPGEGEHKIM YIRLQRN+PGF+PNTRHCLYGLDADLIML
Sbjct: 175 TRLNHNPAWKNIKVILSDSNVPGEGEHKIMEYIRLQRNIPGFNPNTRHCLYGLDADLIML 234
Query: 241 SLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIHKK 300
SLATHE+HFSILREVITLPG Q+KCFVCGQ GH AA+CHGKP D N D+ PIHKK
Sbjct: 235 SLATHEVHFSILREVITLPG-QDKCFVCGQAGHFAADCHGKPETKAEDGNPADEIPIHKK 293
Query: 301 KYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGA 360
KYQFLNIWVLREYLQYEL+IPNPPF I+FER+VDDFVFLCFFVGNDFLPHMPTLEIREGA
Sbjct: 294 KYQFLNIWVLREYLQYELEIPNPPFEIDFERVVDDFVFLCFFVGNDFLPHMPTLEIREGA 353
Query: 361 INLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYEYNEA 420
INLLMH+YR+EFTAMGGYLT AGEV LDRVE FIQSVAV+EDQIFQKR R+QQ E NE
Sbjct: 354 INLLMHIYRKEFTAMGGYLTYAGEVFLDRVEYFIQSVAVHEDQIFQKRVRVQQVAENNEE 413
Query: 421 MKLNARRESSEELLQAPVA-VADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKY 479
M+ R +LQ P A +D VKLGEPGYKERYYA+KF S+ EEIDKVKKD+VLKY
Sbjct: 414 MRARVR----GVILQEPRASFSDKVKLGEPGYKERYYAEKFGASSLEEIDKVKKDIVLKY 469
Query: 480 VEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLP 539
VEGLCWVC+YYY VCSW+W+YPYHYAPFASDLKDL +LEI F GEPF+PFDQLMG LP
Sbjct: 470 VEGLCWVCQYYYNGVCSWKWYYPYHYAPFASDLKDLPNLEIIFSPGEPFKPFDQLMGVLP 529
Query: 540 AAS-----------SSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPF 588
A+ S+ALP+KYR+LMTDPSSPI+ FYP DF+IDMNGKRFAWQGV KLPF
Sbjct: 530 ASRFFLYHVLRSILSNALPDKYRDLMTDPSSPIFHFYPADFEIDMNGKRFAWQGVAKLPF 589
Query: 589 IDEKLLLRQTKKLEVFLT--EEELFRNSVMLDLLYVHPQHPLYQQITLYCQLYHQLPPQD 646
IDEK LL T+KLE LT EEE RNSVMLDLLYV+ H L I LY Q++ +L +
Sbjct: 590 IDEKKLLAATRKLEDTLTMQEEEQRRNSVMLDLLYVNRAHDLASHILLYYQVFGRLATHE 649
Query: 647 RFAWEIDVNASGGMNGYIWLCERNGLRSIIPSPVKGLPDIERNQAM 692
R I+ NASGGMNGY+W CERN L SI PSP+ GLPDIE NQ +
Sbjct: 650 RCVSPINANASGGMNGYLWACERNVLSSIAPSPIDGLPDIESNQVL 695
>gi|413932825|gb|AFW67376.1| hypothetical protein ZEAMMB73_239358 [Zea mays]
Length = 990
Score = 986 bits (2548), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 496/693 (71%), Positives = 566/693 (81%), Gaps = 11/693 (1%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPAFYRWLADRYPL++ D EE+P G PVD+ +PNPNG+EFDNLYLDMNGII
Sbjct: 1 MGVPAFYRWLADRYPLTVSDAEEEEPVELEPGAFVPVDLRRPNPNGLEFDNLYLDMNGII 60
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPCFHP+G+PAPT+YD+VFKSIFDYIDH+F L+RPRKLLY+AIDGVAPRAKMNQQR+RRF
Sbjct: 61 HPCFHPEGRPAPTTYDEVFKSIFDYIDHLFGLIRPRKLLYMAIDGVAPRAKMNQQRSRRF 120
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQ 180
RAAKDAA+A AEEERLRKEFE G+ L+ KEK E DSNVITPGT+FM VLS ALQY+IQ
Sbjct: 121 RAAKDAADAAAEEERLRKEFEAEGRTLAQKEKSEAIDSNVITPGTEFMFVLSTALQYYIQ 180
Query: 181 ARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
RLN GWQ K+ILSD+NVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML
Sbjct: 181 LRLNHTLGWQSVKIILSDSNVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
Query: 241 SLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIHKK 300
+LATHE+HFSILREVI++PGQ EKCF+CGQVGHLAAEC G + N V+ PIHKK
Sbjct: 241 ALATHEVHFSILREVISMPGQHEKCFLCGQVGHLAAECRGPSQPD----NSVELPPIHKK 296
Query: 301 KYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGA 360
KYQFLNIWVLREYL +L+I + PF INFER++DDFVF+CFFVGNDFLPHMPTLEIREGA
Sbjct: 297 KYQFLNIWVLREYLAKDLEIIDAPFKINFERLIDDFVFMCFFVGNDFLPHMPTLEIREGA 356
Query: 361 INLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYEYNEA 420
INLLM +YR EFT+MGGYLTD GEV+LDRVE FIQSVAV E+QIFQKR RIQQA E NE
Sbjct: 357 INLLMSIYRSEFTSMGGYLTDVGEVILDRVEHFIQSVAVNEEQIFQKRARIQQARENNEE 416
Query: 421 MKLNARRESSEELLQAPVAVADTVKLGEPGYKERYYADKF-EISNPEEIDKVKKDVVLKY 479
K +RE+SEE D VKLGEPGY+ERYYADKF E + + I +V++DVV KY
Sbjct: 417 -KHKMQRENSEE-----DQYVDKVKLGEPGYRERYYADKFKEEAESKPIVQVRRDVVQKY 470
Query: 480 VEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLP 539
VEGLCWV RYYYQ VCSWQWFYPYHYAPFASDLK L++LEITFFLG+PF+PFDQLMGTLP
Sbjct: 471 VEGLCWVMRYYYQGVCSWQWFYPYHYAPFASDLKGLAELEITFFLGQPFKPFDQLMGTLP 530
Query: 540 AASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTK 599
AASS+ALP+ Y +LM+DP SP+ FYP DF+IDMNGKRFAWQGV KLPFIDE+ LL +T+
Sbjct: 531 AASSNALPKYYGDLMSDPDSPLKSFYPKDFEIDMNGKRFAWQGVAKLPFIDERRLLAETR 590
Query: 600 KLEVFLTEEELFRNSVMLDLLYVHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVNASGG 659
KLE LTEEE FRN MLD++YV HPL QI Q Y+ L D + I+ ASGG
Sbjct: 591 KLEDTLTEEEKFRNRTMLDIIYVRDTHPLITQIIFLYQNYYHLSRTDPYVIPIEPAASGG 650
Query: 660 MNGYIWLCERNGLRSIIPSPVKGLPDIERNQAM 692
MNG++ L ERN + SPVKG I +N+ +
Sbjct: 651 MNGFLCLSERNWYSVTVTSPVKGFNGIAQNRVL 683
>gi|242037819|ref|XP_002466304.1| hypothetical protein SORBIDRAFT_01g005340 [Sorghum bicolor]
gi|241920158|gb|EER93302.1| hypothetical protein SORBIDRAFT_01g005340 [Sorghum bicolor]
Length = 990
Score = 982 bits (2538), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 494/693 (71%), Positives = 562/693 (81%), Gaps = 11/693 (1%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPAFYRWLADRYPL++ D EE+P G PVD+ +PNPNG+EFDNLYLDMNGII
Sbjct: 1 MGVPAFYRWLADRYPLTVSDAEEEEPVELEPGAFVPVDLRRPNPNGLEFDNLYLDMNGII 60
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPCFHP+G+PAPT+YD+VFKSIF YIDH+F LVRPRKLLY+AIDGVAPRAKMNQQR+RRF
Sbjct: 61 HPCFHPEGRPAPTTYDEVFKSIFYYIDHLFGLVRPRKLLYMAIDGVAPRAKMNQQRSRRF 120
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQ 180
RAAKDAA+A AEEERLRKEFE G+ L+ KEK E DSNVITPGTQFM VLS ALQY+IQ
Sbjct: 121 RAAKDAADAAAEEERLRKEFEAEGRTLAQKEKSEAIDSNVITPGTQFMFVLSTALQYYIQ 180
Query: 181 ARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
RLN GWQ K+ILSD+NVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML
Sbjct: 181 LRLNHTLGWQSVKIILSDSNVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
Query: 241 SLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIHKK 300
+LATHE+HFSILREVI++PGQQEKCF+CGQ GHLAAEC G + N V+ PIHKK
Sbjct: 241 ALATHEVHFSILREVISMPGQQEKCFLCGQAGHLAAECRGPSQPD----NSVELPPIHKK 296
Query: 301 KYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGA 360
KYQFLNIWVLREYL +L+I + PF INFER++DDFVF+CFFVGNDFLPHMPTLEIREGA
Sbjct: 297 KYQFLNIWVLREYLAKDLEIVDAPFKINFERLIDDFVFMCFFVGNDFLPHMPTLEIREGA 356
Query: 361 INLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYEYNEA 420
INLLM +YR EFT+MGGYLTD GEV+LDRVE FIQSVAV E+QIFQKR RIQQA E NE
Sbjct: 357 INLLMSIYRSEFTSMGGYLTDGGEVILDRVEHFIQSVAVNEEQIFQKRARIQQARENNEE 416
Query: 421 MKLNARRESSEELLQAPVAVADTVKLGEPGYKERYYADKF-EISNPEEIDKVKKDVVLKY 479
K +RE+SEE D VKLGEPGY+ERYYA+KF E + + ID+V++DVV KY
Sbjct: 417 -KHRIQRENSEE-----NQYVDKVKLGEPGYRERYYAEKFKEEAESKPIDQVRRDVVQKY 470
Query: 480 VEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLP 539
VEGLCWV RYYYQ VCSWQWFYPYHYAPFASDLK L++LEITFFLG+PF+PFDQLMGTLP
Sbjct: 471 VEGLCWVMRYYYQGVCSWQWFYPYHYAPFASDLKGLAELEITFFLGQPFKPFDQLMGTLP 530
Query: 540 AASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTK 599
AASS+ALP+ Y +LMTDP SP+ FYP DF+IDMNGKRFAWQG+ KLPFIDE LL +T+
Sbjct: 531 AASSNALPKYYGDLMTDPDSPLKSFYPKDFEIDMNGKRFAWQGIAKLPFIDEMRLLAETR 590
Query: 600 KLEVFLTEEELFRNSVMLDLLYVHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVNASGG 659
KLE LTEEE FRN M D++YV HPL QI Q Y+ L D + I SGG
Sbjct: 591 KLEDSLTEEERFRNRTMFDIIYVRDTHPLSSQIMFLYQNYYHLSRTDPYVIPIQPAVSGG 650
Query: 660 MNGYIWLCERNGLRSIIPSPVKGLPDIERNQAM 692
MNG++ L ERN + SPV+G I +N+ +
Sbjct: 651 MNGFLCLSERNWYIVTVTSPVRGFNGIAQNRVL 683
>gi|357111459|ref|XP_003557530.1| PREDICTED: 5'-3' exoribonuclease 4-like [Brachypodium distachyon]
Length = 992
Score = 981 bits (2537), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 492/695 (70%), Positives = 566/695 (81%), Gaps = 13/695 (1%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPAFYRWLADRYP ++ D EE+P G PVD+ +PNPNG+EFDNLYLDMNGII
Sbjct: 1 MGVPAFYRWLADRYPQTVSDAAEEEPVELEPGAFVPVDLRRPNPNGLEFDNLYLDMNGII 60
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPCFHP+G+P+PT+YD VFKSIFDYIDH+F LVRPRKL+Y+AIDGVAPRAKMNQQR+RRF
Sbjct: 61 HPCFHPEGRPSPTTYDQVFKSIFDYIDHLFCLVRPRKLVYMAIDGVAPRAKMNQQRSRRF 120
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQ 180
RAAKDAA+A AEEERLR +FE G+ L K+K E DSNVITPGTQFM VLS+ALQY+IQ
Sbjct: 121 RAAKDAADAAAEEERLRLDFEAEGRTLVQKQKSEAIDSNVITPGTQFMFVLSSALQYYIQ 180
Query: 181 ARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
RLN PGWQ KV+LSD+NVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML
Sbjct: 181 LRLNHTPGWQSVKVMLSDSNVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
Query: 241 SLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADW-NGVDDTPIHK 299
SLATHE+HFSILREVIT+PGQ EKCF+CGQVGHLAAEC G PA N V+ PIHK
Sbjct: 241 SLATHEVHFSILREVITMPGQHEKCFLCGQVGHLAAECRG-----PAQADNVVELPPIHK 295
Query: 300 KKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREG 359
KKYQFLNIWVLREYL+ +L+I +PPF INFERIVDDFVF+CFFVGNDFLPHMPTLEIREG
Sbjct: 296 KKYQFLNIWVLREYLEKDLEIVDPPFKINFERIVDDFVFICFFVGNDFLPHMPTLEIREG 355
Query: 360 AINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYEYNE 419
A+NLLM +YR EF MGGYLTD GEVLL+RVE FIQSVAV+E+QIF+KR RIQQAYE NE
Sbjct: 356 ALNLLMAIYRSEFKPMGGYLTDGGEVLLERVEHFIQSVAVHEEQIFRKRARIQQAYENNE 415
Query: 420 AMKLNARRESSEELLQAPVAVADTVKLGEPGYKERYYADKF-EISNPEEIDKVKKDVVLK 478
+ +RE+SE++ D VKLGEPGY+ERYYA+KF E + + ID+V++DVV K
Sbjct: 416 ERR-KGQRENSEDV----NPYVDMVKLGEPGYRERYYAEKFREEAESKPIDQVQRDVVQK 470
Query: 479 YVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTL 538
YVEGLCWV RYYYQ VCSWQWFYPYHYAPFASDLK L++ EITFFLG+PF+PFDQLMGTL
Sbjct: 471 YVEGLCWVMRYYYQGVCSWQWFYPYHYAPFASDLKGLTEFEITFFLGQPFKPFDQLMGTL 530
Query: 539 PAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQT 598
PAASS+ALP+ Y +LMTDP+SP+ FYP DF+IDMNGKRFAWQG+ KLPFIDE+ LL +T
Sbjct: 531 PAASSNALPKYYGDLMTDPNSPLKYFYPKDFEIDMNGKRFAWQGIAKLPFIDERRLLAET 590
Query: 599 KKLEVFLTEEELFRNSVMLDLLYVHPQHPLYQQITLYCQLYHQLPPQD-RFAWEIDVNAS 657
+K+E LTEEE FRN M D++YV HPL QI Q+ Q D + ID AS
Sbjct: 591 QKVEDSLTEEERFRNRTMFDIIYVRETHPLAAQIAFLYQMCTQPSTTDPSYLIPIDPAAS 650
Query: 658 GGMNGYIWLCERNGLRSIIPSPVKGLPDIERNQAM 692
GGMNG++ L +RN + SPVKG I N+ +
Sbjct: 651 GGMNGFLCLSQRNWYSISVGSPVKGFNGITHNRVL 685
>gi|108711532|gb|ABF99327.1| 5'-3' exoribonuclease, putative, expressed [Oryza sativa Japonica
Group]
Length = 682
Score = 981 bits (2536), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 496/693 (71%), Positives = 569/693 (82%), Gaps = 12/693 (1%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPAFYRWLADRYP ++ D VEE+P G PVD+ +PNPNG+EFDNLYLDMNGII
Sbjct: 1 MGVPAFYRWLADRYPQTVSDAVEEEPVELEPGAFVPVDLRRPNPNGLEFDNLYLDMNGII 60
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPCFHP+G+PAPT+YD+VFKSIF YIDH+F LVRPRKL+Y+AIDGVAPRAKMNQQR+RRF
Sbjct: 61 HPCFHPEGRPAPTTYDEVFKSIFAYIDHLFGLVRPRKLIYMAIDGVAPRAKMNQQRSRRF 120
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQ 180
RAAKDAA+A AEEERLRKEFE G+ L AKEK E DSNVITPGT FM VLS+ALQY+IQ
Sbjct: 121 RAAKDAADAAAEEERLRKEFEAEGRTLVAKEKSEAIDSNVITPGTPFMFVLSSALQYYIQ 180
Query: 181 ARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
RLN PGWQ KV+LSD+NVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML
Sbjct: 181 LRLNHTPGWQSVKVMLSDSNVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
Query: 241 SLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIHKK 300
SLATHE+HFSILREVIT+PGQ EKCF+CGQVGHLAAEC G AD V+ PIHKK
Sbjct: 241 SLATHEVHFSILREVITMPGQHEKCFLCGQVGHLAAECR---GSGQAD-KTVELPPIHKK 296
Query: 301 KYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGA 360
KYQFLNIWVLREYL+ +L+I +PPF INFER+VDDFVF+CFFVGNDFLPHMPTLEIREGA
Sbjct: 297 KYQFLNIWVLREYLEKDLEIVDPPFKINFERVVDDFVFMCFFVGNDFLPHMPTLEIREGA 356
Query: 361 INLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYEYNEA 420
INLLM++YRREFT+MGGYLTD GEVLLDRVE FIQSVAV+E+QIFQKR RIQ+A + NE
Sbjct: 357 INLLMNIYRREFTSMGGYLTDGGEVLLDRVEHFIQSVAVHEEQIFQKRARIQKAIQNNEE 416
Query: 421 MKLNARRESSEELLQAPVAVADTVKLGEPGYKERYYADKF-EISNPEEIDKVKKDVVLKY 479
+ + E+SE+ D VKLGEPGY+ RYYA+KF E + + ID+V++DVV KY
Sbjct: 417 -RNRVQTENSED-----NQYVDKVKLGEPGYRVRYYAEKFKEEAELKPIDQVQRDVVQKY 470
Query: 480 VEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLP 539
VEGLCWV RYYYQ VCSWQWFYPYHYAPFASDLK L++LEITFFLG+PF+PFDQLMGTLP
Sbjct: 471 VEGLCWVMRYYYQGVCSWQWFYPYHYAPFASDLKCLAELEITFFLGQPFKPFDQLMGTLP 530
Query: 540 AASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTK 599
AASS+ALP+ Y +LM DP+SP+ FYP DF+IDMNGKRFAWQG+ KLPFIDE+ LL +T+
Sbjct: 531 AASSNALPKYYGDLMNDPNSPLKSFYPKDFEIDMNGKRFAWQGIAKLPFIDERRLLAETQ 590
Query: 600 KLEVFLTEEELFRNSVMLDLLYVHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVNASGG 659
KLE LT+EE FRN M D+LYV HPL QI Q+ Q P + ID ASGG
Sbjct: 591 KLEETLTDEERFRNRTMFDILYVRETHPLAAQIAFLYQMCSQ-SPNASYIIPIDPAASGG 649
Query: 660 MNGYIWLCERNGLRSIIPSPVKGLPDIERNQAM 692
MNG++ L ERN ++ SPVKG I +N+ +
Sbjct: 650 MNGFLCLSERNCYSIVVTSPVKGFNGIAQNRVL 682
>gi|357512205|ref|XP_003626391.1| 5'-3' exoribonuclease [Medicago truncatula]
gi|355501406|gb|AES82609.1| 5'-3' exoribonuclease [Medicago truncatula]
Length = 629
Score = 981 bits (2535), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 492/613 (80%), Positives = 544/613 (88%), Gaps = 8/613 (1%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEE--DPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNG 58
MGVPAFYRWLADRYP SIVDVVEE P V G G PVDVS+PNPNGMEFDNLYLDMNG
Sbjct: 1 MGVPAFYRWLADRYPRSIVDVVEEAPSPSVAG-GPPFPVDVSRPNPNGMEFDNLYLDMNG 59
Query: 59 IIHPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
IIHPCFHPDGKPAP +YDDVFKS+FDYIDH+F LVRPRKLLYLAIDGVAPRAKMNQQR+R
Sbjct: 60 IIHPCFHPDGKPAPATYDDVFKSMFDYIDHLFSLVRPRKLLYLAIDGVAPRAKMNQQRSR 119
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RFRAAKDAAEAEAEEERLR EF + +LL++KEK ET DSNVITPGT FMAVLS ALQY+
Sbjct: 120 RFRAAKDAAEAEAEEERLRNEFADQIELLTSKEKTETHDSNVITPGTPFMAVLSVALQYY 179
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
IQ RLN PGW+ TKV+LSD+NVPGEGEHKIM YIRLQRNLPGFDPNTRHCLYGLDADLI
Sbjct: 180 IQTRLNYNPGWRNTKVMLSDSNVPGEGEHKIMDYIRLQRNLPGFDPNTRHCLYGLDADLI 239
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
MLSLATHEIHFSILREVIT PGQQEKC++CGQVGHLAAEC GKPGDN DW VDDTPIH
Sbjct: 240 MLSLATHEIHFSILREVITFPGQQEKCYMCGQVGHLAAECRGKPGDNALDWP-VDDTPIH 298
Query: 299 KKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIRE 358
KKKYQFL+IWVLREYLQYEL IP+PPF I+FERIVDDFVFLCFFVGNDFLPHMPTLEIRE
Sbjct: 299 KKKYQFLHIWVLREYLQYELLIPDPPFEIDFERIVDDFVFLCFFVGNDFLPHMPTLEIRE 358
Query: 359 GAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYEYN 418
GA+NLLMH+YR+EFTAMGGYLTDAGEV L+RVE FIQ VAV+E+QIFQKR RIQQ+ E+N
Sbjct: 359 GAVNLLMHIYRKEFTAMGGYLTDAGEVFLERVENFIQCVAVHEEQIFQKRVRIQQSQEFN 418
Query: 419 EAMKLNARRESSEELLQAPVAVADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLK 478
E M+ AR E EE +V D VKLG+PGY ERYYA+KF S+P EI+++KKD+VLK
Sbjct: 419 EGMRARARGEMPEE---PRASVVDKVKLGQPGYTERYYAEKFGASDP-EIERIKKDIVLK 474
Query: 479 YVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTL 538
YVEGLCWVCRYYYQ VCSWQW+YPYHYAPFASDLKDL+DLEITFF+GEPFRPFDQLMGTL
Sbjct: 475 YVEGLCWVCRYYYQGVCSWQWYYPYHYAPFASDLKDLADLEITFFMGEPFRPFDQLMGTL 534
Query: 539 PAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQT 598
P++SSSALPE+YR+LM +PSSPI +FYP DF+IDMNGK+++WQGV KLPFIDEK LL T
Sbjct: 535 PSSSSSALPERYRDLMINPSSPILQFYPSDFEIDMNGKKYSWQGVAKLPFIDEKKLLSAT 594
Query: 599 KKLEVFLTEEELF 611
+ LE LT +++
Sbjct: 595 RTLEGTLTVWKIY 607
>gi|115455883|ref|NP_001051542.1| Os03g0794800 [Oryza sativa Japonica Group]
gi|50400038|gb|AAT76426.1| putative 5'-3' exonuclease [Oryza sativa Japonica Group]
gi|108711531|gb|ABF99326.1| 5'-3' exoribonuclease, putative, expressed [Oryza sativa Japonica
Group]
gi|113550013|dbj|BAF13456.1| Os03g0794800 [Oryza sativa Japonica Group]
Length = 988
Score = 981 bits (2535), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 496/693 (71%), Positives = 569/693 (82%), Gaps = 12/693 (1%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPAFYRWLADRYP ++ D VEE+P G PVD+ +PNPNG+EFDNLYLDMNGII
Sbjct: 1 MGVPAFYRWLADRYPQTVSDAVEEEPVELEPGAFVPVDLRRPNPNGLEFDNLYLDMNGII 60
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPCFHP+G+PAPT+YD+VFKSIF YIDH+F LVRPRKL+Y+AIDGVAPRAKMNQQR+RRF
Sbjct: 61 HPCFHPEGRPAPTTYDEVFKSIFAYIDHLFGLVRPRKLIYMAIDGVAPRAKMNQQRSRRF 120
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQ 180
RAAKDAA+A AEEERLRKEFE G+ L AKEK E DSNVITPGT FM VLS+ALQY+IQ
Sbjct: 121 RAAKDAADAAAEEERLRKEFEAEGRTLVAKEKSEAIDSNVITPGTPFMFVLSSALQYYIQ 180
Query: 181 ARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
RLN PGWQ KV+LSD+NVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML
Sbjct: 181 LRLNHTPGWQSVKVMLSDSNVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
Query: 241 SLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIHKK 300
SLATHE+HFSILREVIT+PGQ EKCF+CGQVGHLAAEC G AD V+ PIHKK
Sbjct: 241 SLATHEVHFSILREVITMPGQHEKCFLCGQVGHLAAECR---GSGQAD-KTVELPPIHKK 296
Query: 301 KYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGA 360
KYQFLNIWVLREYL+ +L+I +PPF INFER+VDDFVF+CFFVGNDFLPHMPTLEIREGA
Sbjct: 297 KYQFLNIWVLREYLEKDLEIVDPPFKINFERVVDDFVFMCFFVGNDFLPHMPTLEIREGA 356
Query: 361 INLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYEYNEA 420
INLLM++YRREFT+MGGYLTD GEVLLDRVE FIQSVAV+E+QIFQKR RIQ+A + NE
Sbjct: 357 INLLMNIYRREFTSMGGYLTDGGEVLLDRVEHFIQSVAVHEEQIFQKRARIQKAIQNNEE 416
Query: 421 MKLNARRESSEELLQAPVAVADTVKLGEPGYKERYYADKF-EISNPEEIDKVKKDVVLKY 479
+ + E+SE+ D VKLGEPGY+ RYYA+KF E + + ID+V++DVV KY
Sbjct: 417 -RNRVQTENSED-----NQYVDKVKLGEPGYRVRYYAEKFKEEAELKPIDQVQRDVVQKY 470
Query: 480 VEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLP 539
VEGLCWV RYYYQ VCSWQWFYPYHYAPFASDLK L++LEITFFLG+PF+PFDQLMGTLP
Sbjct: 471 VEGLCWVMRYYYQGVCSWQWFYPYHYAPFASDLKCLAELEITFFLGQPFKPFDQLMGTLP 530
Query: 540 AASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTK 599
AASS+ALP+ Y +LM DP+SP+ FYP DF+IDMNGKRFAWQG+ KLPFIDE+ LL +T+
Sbjct: 531 AASSNALPKYYGDLMNDPNSPLKSFYPKDFEIDMNGKRFAWQGIAKLPFIDERRLLAETQ 590
Query: 600 KLEVFLTEEELFRNSVMLDLLYVHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVNASGG 659
KLE LT+EE FRN M D+LYV HPL QI Q+ Q P + ID ASGG
Sbjct: 591 KLEETLTDEERFRNRTMFDILYVRETHPLAAQIAFLYQMCSQ-SPNASYIIPIDPAASGG 649
Query: 660 MNGYIWLCERNGLRSIIPSPVKGLPDIERNQAM 692
MNG++ L ERN ++ SPVKG I +N+ +
Sbjct: 650 MNGFLCLSERNCYSIVVTSPVKGFNGIAQNRVL 682
>gi|108711533|gb|ABF99328.1| 5'-3' exoribonuclease, putative, expressed [Oryza sativa Japonica
Group]
Length = 718
Score = 980 bits (2534), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 496/693 (71%), Positives = 569/693 (82%), Gaps = 12/693 (1%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPAFYRWLADRYP ++ D VEE+P G PVD+ +PNPNG+EFDNLYLDMNGII
Sbjct: 1 MGVPAFYRWLADRYPQTVSDAVEEEPVELEPGAFVPVDLRRPNPNGLEFDNLYLDMNGII 60
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPCFHP+G+PAPT+YD+VFKSIF YIDH+F LVRPRKL+Y+AIDGVAPRAKMNQQR+RRF
Sbjct: 61 HPCFHPEGRPAPTTYDEVFKSIFAYIDHLFGLVRPRKLIYMAIDGVAPRAKMNQQRSRRF 120
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQ 180
RAAKDAA+A AEEERLRKEFE G+ L AKEK E DSNVITPGT FM VLS+ALQY+IQ
Sbjct: 121 RAAKDAADAAAEEERLRKEFEAEGRTLVAKEKSEAIDSNVITPGTPFMFVLSSALQYYIQ 180
Query: 181 ARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
RLN PGWQ KV+LSD+NVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML
Sbjct: 181 LRLNHTPGWQSVKVMLSDSNVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
Query: 241 SLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIHKK 300
SLATHE+HFSILREVIT+PGQ EKCF+CGQVGHLAAEC G AD V+ PIHKK
Sbjct: 241 SLATHEVHFSILREVITMPGQHEKCFLCGQVGHLAAECR---GSGQAD-KTVELPPIHKK 296
Query: 301 KYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGA 360
KYQFLNIWVLREYL+ +L+I +PPF INFER+VDDFVF+CFFVGNDFLPHMPTLEIREGA
Sbjct: 297 KYQFLNIWVLREYLEKDLEIVDPPFKINFERVVDDFVFMCFFVGNDFLPHMPTLEIREGA 356
Query: 361 INLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYEYNEA 420
INLLM++YRREFT+MGGYLTD GEVLLDRVE FIQSVAV+E+QIFQKR RIQ+A + NE
Sbjct: 357 INLLMNIYRREFTSMGGYLTDGGEVLLDRVEHFIQSVAVHEEQIFQKRARIQKAIQNNEE 416
Query: 421 MKLNARRESSEELLQAPVAVADTVKLGEPGYKERYYADKF-EISNPEEIDKVKKDVVLKY 479
+ + E+SE+ D VKLGEPGY+ RYYA+KF E + + ID+V++DVV KY
Sbjct: 417 -RNRVQTENSED-----NQYVDKVKLGEPGYRVRYYAEKFKEEAELKPIDQVQRDVVQKY 470
Query: 480 VEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLP 539
VEGLCWV RYYYQ VCSWQWFYPYHYAPFASDLK L++LEITFFLG+PF+PFDQLMGTLP
Sbjct: 471 VEGLCWVMRYYYQGVCSWQWFYPYHYAPFASDLKCLAELEITFFLGQPFKPFDQLMGTLP 530
Query: 540 AASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTK 599
AASS+ALP+ Y +LM DP+SP+ FYP DF+IDMNGKRFAWQG+ KLPFIDE+ LL +T+
Sbjct: 531 AASSNALPKYYGDLMNDPNSPLKSFYPKDFEIDMNGKRFAWQGIAKLPFIDERRLLAETQ 590
Query: 600 KLEVFLTEEELFRNSVMLDLLYVHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVNASGG 659
KLE LT+EE FRN M D+LYV HPL QI Q+ Q P + ID ASGG
Sbjct: 591 KLEETLTDEERFRNRTMFDILYVRETHPLAAQIAFLYQMCSQ-SPNASYIIPIDPAASGG 649
Query: 660 MNGYIWLCERNGLRSIIPSPVKGLPDIERNQAM 692
MNG++ L ERN ++ SPVKG I +N+ +
Sbjct: 650 MNGFLCLSERNCYSIVVTSPVKGFNGIAQNRVL 682
>gi|125588231|gb|EAZ28895.1| hypothetical protein OsJ_12935 [Oryza sativa Japonica Group]
Length = 997
Score = 978 bits (2529), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 497/697 (71%), Positives = 570/697 (81%), Gaps = 11/697 (1%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPAFYRWLADRYP ++ D VEE+P G PVD+ +PNPNG+EFDNLYLDMNGII
Sbjct: 1 MGVPAFYRWLADRYPQTVSDAVEEEPVELEPGAFVPVDLRRPNPNGLEFDNLYLDMNGII 60
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPCFHP+G+PAPT+YD+VFKSIF YIDH+F LVRPRKL+Y+AIDGVAPRAKMNQQR+RRF
Sbjct: 61 HPCFHPEGRPAPTTYDEVFKSIFAYIDHLFGLVRPRKLIYMAIDGVAPRAKMNQQRSRRF 120
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQ 180
RAAKDAA+A AEEERLRKEFE G+ L AKEK E DSNVITPGT FM VLS+ALQY+IQ
Sbjct: 121 RAAKDAADAAAEEERLRKEFEAEGRTLVAKEKSEAIDSNVITPGTPFMFVLSSALQYYIQ 180
Query: 181 ARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
RLN PGWQ KV+LSD+NVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML
Sbjct: 181 LRLNHTPGWQSVKVMLSDSNVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
Query: 241 SLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIHKK 300
SLATHE+HFSILREVIT+PGQ EKCF+CGQVGHLAAEC G AD V+ PIHKK
Sbjct: 241 SLATHEVHFSILREVITMPGQHEKCFLCGQVGHLAAECR---GSGQAD-KTVELPPIHKK 296
Query: 301 KYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGA 360
KYQFLNIWVLREYL+ +L+I +PPF INFER+VDDFVF+CFFVGNDFLPHMPTLEIREGA
Sbjct: 297 KYQFLNIWVLREYLEKDLEIVDPPFKINFERVVDDFVFMCFFVGNDFLPHMPTLEIREGA 356
Query: 361 INLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYEYNEA 420
INLLM++YRREFT+MGGYLTD GEVLLDRVE FIQSVAV+E+QIFQKR RIQ+A + NE
Sbjct: 357 INLLMNIYRREFTSMGGYLTDGGEVLLDRVEHFIQSVAVHEEQIFQKRARIQKAIQNNEE 416
Query: 421 MKLNARRESSEELLQAPVAVADT----VKLGEPGYKERYYADKF-EISNPEEIDKVKKDV 475
+ + E+SE+ A T VKLGEPGY+ RYYA+KF E + + ID+V++DV
Sbjct: 417 -RNRVQTENSEDNQYVDKAGFKTLGFPVKLGEPGYRVRYYAEKFKEEAELKPIDQVQRDV 475
Query: 476 VLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLM 535
V KYVEGLCWV RYYYQ VCSWQWFYPYHYAPFASDLK L++LEITFFLG+PF+PFDQLM
Sbjct: 476 VQKYVEGLCWVMRYYYQGVCSWQWFYPYHYAPFASDLKCLAELEITFFLGQPFKPFDQLM 535
Query: 536 GTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLL 595
GTLPAASS+ALP+ Y +LM DP+SP+ FYP DF+IDMNGKRFAWQG+ KLPFIDE+ LL
Sbjct: 536 GTLPAASSNALPKYYGDLMNDPNSPLKSFYPKDFEIDMNGKRFAWQGIAKLPFIDERRLL 595
Query: 596 RQTKKLEVFLTEEELFRNSVMLDLLYVHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVN 655
+T+KLE LT+EE FRN M D+LYV HPL QI Q+ Q P + ID
Sbjct: 596 AETQKLEETLTDEERFRNRTMFDILYVRETHPLAAQIAFLYQMCSQ-SPNASYIIPIDPA 654
Query: 656 ASGGMNGYIWLCERNGLRSIIPSPVKGLPDIERNQAM 692
ASGGMNG++ L ERN ++ SPVKG I +N+ +
Sbjct: 655 ASGGMNGFLCLSERNCYSIVVTSPVKGFNGIAQNRVL 691
>gi|125546024|gb|EAY92163.1| hypothetical protein OsI_13876 [Oryza sativa Indica Group]
Length = 997
Score = 977 bits (2525), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 497/697 (71%), Positives = 569/697 (81%), Gaps = 11/697 (1%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPAFYRWLADRYP ++ D VEE+P G PVD+ +PNPNG+EFDNLYLDMNGII
Sbjct: 1 MGVPAFYRWLADRYPQTVSDAVEEEPVELEPGAFVPVDLRRPNPNGLEFDNLYLDMNGII 60
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPCFHP+G+PAPT+YD+VFKSIF YIDH+F LVRPRKL+Y+AIDGVAPRAKMNQQR+RRF
Sbjct: 61 HPCFHPEGRPAPTTYDEVFKSIFAYIDHLFGLVRPRKLIYMAIDGVAPRAKMNQQRSRRF 120
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQ 180
RAAKDAA+A AEEERLRKEFE G+ L AKEK E DSNVITPGT FM VLS+ALQY+IQ
Sbjct: 121 RAAKDAADAAAEEERLRKEFEAEGRTLVAKEKSEAIDSNVITPGTPFMFVLSSALQYYIQ 180
Query: 181 ARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
RLN PGWQ KV+LSD+NVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML
Sbjct: 181 LRLNHTPGWQSVKVMLSDSNVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
Query: 241 SLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIHKK 300
SLATHE+HFSILREVIT+PGQ EKCF+CGQVGHLAAEC G AD V+ PIHKK
Sbjct: 241 SLATHEVHFSILREVITMPGQHEKCFLCGQVGHLAAECR---GSGQAD-KTVELPPIHKK 296
Query: 301 KYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGA 360
KYQFLNIWVLREYL+ +L+I +PPF INFER+VDDFVF+CFFVGNDFLPHMPTLEIREGA
Sbjct: 297 KYQFLNIWVLREYLEKDLEIVDPPFKINFERVVDDFVFMCFFVGNDFLPHMPTLEIREGA 356
Query: 361 INLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYEYNEA 420
INLLM++YRREFT+MGGYLTD GEVLLDRVE FIQSVAV+E+QIFQKR RIQ+A + NE
Sbjct: 357 INLLMNIYRREFTSMGGYLTDGGEVLLDRVEHFIQSVAVHEEQIFQKRARIQKAIQNNEE 416
Query: 421 MKLNARRESSEELLQAPVAVADT----VKLGEPGYKERYYADKF-EISNPEEIDKVKKDV 475
+ + E+SE+ A T VKLGEPGY+ RYYA+KF E + + ID+V++DV
Sbjct: 417 -RNRVQTENSEDNQYVDKAGFKTLGFPVKLGEPGYRVRYYAEKFKEEAELKPIDQVQRDV 475
Query: 476 VLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLM 535
V KYVEGLCWV RYYYQ VCSWQWFYPYHYAPFASDLK L++LEITFFLG+PF+PFDQLM
Sbjct: 476 VQKYVEGLCWVMRYYYQGVCSWQWFYPYHYAPFASDLKCLAELEITFFLGQPFKPFDQLM 535
Query: 536 GTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLL 595
GTLPAASS+ALP+ Y +LM DP+SP+ FYP DF+IDMNGKRFAWQG+ KLPFIDE+ LL
Sbjct: 536 GTLPAASSNALPKYYGDLMNDPNSPLKSFYPKDFEIDMNGKRFAWQGIAKLPFIDERRLL 595
Query: 596 RQTKKLEVFLTEEELFRNSVMLDLLYVHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVN 655
+T+KLE LT+EE FRN M D+LYV HPL QI Q+ Q P + ID
Sbjct: 596 AETQKLEETLTDEERFRNRTMFDILYVRETHPLAAQIAFLYQMCSQ-SPNASYIIPIDPA 654
Query: 656 ASGGMNGYIWLCERNGLRSIIPSPVKGLPDIERNQAM 692
ASGGMNG++ L ERN + SPVKG I +N+ +
Sbjct: 655 ASGGMNGFLCLSERNCYSIAVTSPVKGFNGIAQNRVL 691
>gi|326494150|dbj|BAJ85609.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1014
Score = 959 bits (2480), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 492/694 (70%), Positives = 567/694 (81%), Gaps = 12/694 (1%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPAFYRWLADRYP ++ D E++P G PVD +PNPNG+EFDNLYLDMNGII
Sbjct: 1 MGVPAFYRWLADRYPQTVSDAEEKEPVELEPGAFVPVDPRRPNPNGLEFDNLYLDMNGII 60
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPCFHP+G+P+PT+YD+VFKSIFDYIDH+F LVRPRK+LY+AIDGVAPRAKMNQQR+RRF
Sbjct: 61 HPCFHPEGRPSPTTYDEVFKSIFDYIDHLFCLVRPRKVLYMAIDGVAPRAKMNQQRSRRF 120
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQ 180
RAAKDAA+A AEEERLR EFE G+ L KEK E DSNVITPGT FM VLS+ALQY+IQ
Sbjct: 121 RAAKDAADAAAEEERLRLEFEAEGRNLVRKEKSEAIDSNVITPGTPFMFVLSSALQYYIQ 180
Query: 181 ARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
RLN PGWQ KVILSD+NVPGEGEHKIMSYIRLQRNLPGFDPNTRH LYGLDADLIML
Sbjct: 181 LRLNHSPGWQSVKVILSDSNVPGEGEHKIMSYIRLQRNLPGFDPNTRHVLYGLDADLIML 240
Query: 241 SLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIHKK 300
+LATHE+HFSILREVIT+PGQ EKCF+CGQVGHLAAEC G PG PAD N V+ PIHKK
Sbjct: 241 ALATHEVHFSILREVITMPGQHEKCFLCGQVGHLAAECQG-PG--PAD-NVVELPPIHKK 296
Query: 301 KYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGA 360
KYQFLNIWVLREYL+ +L+I +PPF IN ERI+DDFVFLCFFVGNDFLPHMPTLEIREGA
Sbjct: 297 KYQFLNIWVLREYLEKDLEIVDPPFKINLERILDDFVFLCFFVGNDFLPHMPTLEIREGA 356
Query: 361 INLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYEYNEA 420
INLLM++YR EF MGGYLTD GEVLL+RVE FIQ+VA++E+QIF+KR RIQ+AYE NE
Sbjct: 357 INLLMNIYRAEFKPMGGYLTDGGEVLLERVEHFIQAVAIHEEQIFRKRARIQKAYENNED 416
Query: 421 MKLNARRESSEELLQAPVAVADTVKLGEPGYKERYYADKF-EISNPEEIDKVKKDVVLKY 479
+ A+ + SEE D VKLGEPG++ERYYA+KF E + + ID+V++DVV KY
Sbjct: 417 RR-RAQGDISEE-----NQYVDMVKLGEPGFRERYYAEKFREEAESKPIDQVQRDVVQKY 470
Query: 480 VEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLP 539
VEGLCWV RYYYQ VCSWQWFYPYHYAPFASDLK L++ EITFFLG+PF+PFDQLMGTLP
Sbjct: 471 VEGLCWVMRYYYQGVCSWQWFYPYHYAPFASDLKSLTEFEITFFLGQPFKPFDQLMGTLP 530
Query: 540 AASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTK 599
AASS+ALP+ Y +LMTDP+SP+ FYP DF+IDMNGKRFAWQG+ KLPFIDE+ LL +T+
Sbjct: 531 AASSNALPKHYGDLMTDPNSPLNYFYPKDFEIDMNGKRFAWQGIAKLPFIDERRLLAETQ 590
Query: 600 KLEVFLTEEELFRNSVMLDLLYVHPQHPLYQQITLYCQLYHQLPPQD-RFAWEIDVNASG 658
KLE LTEEE FRN+ M D++YV HPL I L Q+Y Q D + ID ASG
Sbjct: 591 KLEDTLTEEERFRNTTMFDIIYVRETHPLSAHIALLYQMYSQQMITDPSYCLPIDPAASG 650
Query: 659 GMNGYIWLCERNGLRSIIPSPVKGLPDIERNQAM 692
GMNG++ L +RN + SPVKG I N+ +
Sbjct: 651 GMNGFLCLSQRNWYSISVESPVKGFNGITNNRVL 684
>gi|413932824|gb|AFW67375.1| hypothetical protein ZEAMMB73_239358 [Zea mays]
Length = 652
Score = 951 bits (2459), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 479/657 (72%), Positives = 543/657 (82%), Gaps = 11/657 (1%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPAFYRWLADRYPL++ D EE+P G PVD+ +PNPNG+EFDNLYLDMNGII
Sbjct: 1 MGVPAFYRWLADRYPLTVSDAEEEEPVELEPGAFVPVDLRRPNPNGLEFDNLYLDMNGII 60
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPCFHP+G+PAPT+YD+VFKSIFDYIDH+F L+RPRKLLY+AIDGVAPRAKMNQQR+RRF
Sbjct: 61 HPCFHPEGRPAPTTYDEVFKSIFDYIDHLFGLIRPRKLLYMAIDGVAPRAKMNQQRSRRF 120
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQ 180
RAAKDAA+A AEEERLRKEFE G+ L+ KEK E DSNVITPGT+FM VLS ALQY+IQ
Sbjct: 121 RAAKDAADAAAEEERLRKEFEAEGRTLAQKEKSEAIDSNVITPGTEFMFVLSTALQYYIQ 180
Query: 181 ARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
RLN GWQ K+ILSD+NVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML
Sbjct: 181 LRLNHTLGWQSVKIILSDSNVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
Query: 241 SLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIHKK 300
+LATHE+HFSILREVI++PGQ EKCF+CGQVGHLAAEC G + N V+ PIHKK
Sbjct: 241 ALATHEVHFSILREVISMPGQHEKCFLCGQVGHLAAECRGPSQPD----NSVELPPIHKK 296
Query: 301 KYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGA 360
KYQFLNIWVLREYL +L+I + PF INFER++DDFVF+CFFVGNDFLPHMPTLEIREGA
Sbjct: 297 KYQFLNIWVLREYLAKDLEIIDAPFKINFERLIDDFVFMCFFVGNDFLPHMPTLEIREGA 356
Query: 361 INLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYEYNEA 420
INLLM +YR EFT+MGGYLTD GEV+LDRVE FIQSVAV E+QIFQKR RIQQA E NE
Sbjct: 357 INLLMSIYRSEFTSMGGYLTDVGEVILDRVEHFIQSVAVNEEQIFQKRARIQQARENNEE 416
Query: 421 MKLNARRESSEELLQAPVAVADTVKLGEPGYKERYYADKF-EISNPEEIDKVKKDVVLKY 479
K +RE+SEE D VKLGEPGY+ERYYADKF E + + I +V++DVV KY
Sbjct: 417 -KHKMQRENSEE-----DQYVDKVKLGEPGYRERYYADKFKEEAESKPIVQVRRDVVQKY 470
Query: 480 VEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLP 539
VEGLCWV RYYYQ VCSWQWFYPYHYAPFASDLK L++LEITFFLG+PF+PFDQLMGTLP
Sbjct: 471 VEGLCWVMRYYYQGVCSWQWFYPYHYAPFASDLKGLAELEITFFLGQPFKPFDQLMGTLP 530
Query: 540 AASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTK 599
AASS+ALP+ Y +LM+DP SP+ FYP DF+IDMNGKRFAWQGV KLPFIDE+ LL +T+
Sbjct: 531 AASSNALPKYYGDLMSDPDSPLKSFYPKDFEIDMNGKRFAWQGVAKLPFIDERRLLAETR 590
Query: 600 KLEVFLTEEELFRNSVMLDLLYVHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVNA 656
KLE LTEEE FRN MLD++YV HPL QI Q Y+ L D + I+ A
Sbjct: 591 KLEDTLTEEEKFRNRTMLDIIYVRDTHPLITQIIFLYQNYYHLSRTDPYVIPIEPAA 647
>gi|414876883|tpg|DAA54014.1| TPA: hypothetical protein ZEAMMB73_402768 [Zea mays]
Length = 1066
Score = 819 bits (2115), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 451/788 (57%), Positives = 532/788 (67%), Gaps = 98/788 (12%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPAFYRWLA++YP+ +VDVVEE+P PVD SKPNPN +EFDNLYLDMNGII
Sbjct: 1 MGVPAFYRWLAEKYPMVVVDVVEEEPVEIEGVKV-PVDTSKPNPNSLEFDNLYLDMNGII 59
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPCFHP+ +P+PT++ +VF+ +FDYID +F++VRPR+LLY+AIDGVAPRAKMNQQR+RRF
Sbjct: 60 HPCFHPEDRPSPTTFGEVFQCMFDYIDRLFVMVRPRRLLYMAIDGVAPRAKMNQQRSRRF 119
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQ 180
RAAKDAA+A AEEERLR+EFE G+ L K++ +TCDSNVITPGT+FMAVLS ALQY+I
Sbjct: 120 RAAKDAADAAAEEERLREEFEREGRKLPPKQQSQTCDSNVITPGTEFMAVLSVALQYYIH 179
Query: 181 ARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
RLN PGW+ KVILSDANVPGEGEHKIMSYIR QRNL GF+PNTRHCLYGLDADLIML
Sbjct: 180 RRLNYDPGWKQIKVILSDANVPGEGEHKIMSYIRGQRNLSGFNPNTRHCLYGLDADLIML 239
Query: 241 SLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIHKK 300
+LATHE+HFSILREV+ PGQQ+KCF+CGQVGHLAA C GK +++ + KK
Sbjct: 240 ALATHEVHFSILREVVYTPGQQDKCFLCGQVGHLAANCEGKVKRKAGEFDEKGGAIVPKK 299
Query: 301 KYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGA 360
YQFLNIW LREYL+YE +PNPPF I+FERIVDDF+F+CFFVGNDFLPHMPTLEIREGA
Sbjct: 300 PYQFLNIWTLREYLEYEFRMPNPPFKIDFERIVDDFIFMCFFVGNDFLPHMPTLEIREGA 359
Query: 361 INLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQ------- 413
INLLM VY++EF +MGGYLTD+ L RVE FIQ+V YED+IFQKR R+ Q
Sbjct: 360 INLLMAVYKKEFPSMGGYLTDSCTPDLSRVEHFIQAVGSYEDKIFQKRARLHQRQAERIK 419
Query: 414 ---------------------------------------AYEYNEAMKLNARRE------ 428
YE N + K N R
Sbjct: 420 REKAQAKRGDDLDPHVRDDLIVPIQRFQGSRLASGAVPVPYEQNGSHKDNKERNSRARKA 479
Query: 429 -----SSEELLQAPVAVADTVKLGEPGYKE----------RYYADKFEISNPEEIDKVK- 472
S + A V + ++ E KE R +D F NPEE DKVK
Sbjct: 480 ARVSTSGSSIASALVEAENDLEAQECENKEELKSMLKDALREKSDIFNSDNPEE-DKVKL 538
Query: 473 --------------------------KDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYA 506
+DVVLKY EGLCWV YYY+ VCSWQWFYPYHYA
Sbjct: 539 GEPGWRERYYEEKFGARTPEQIEEIRRDVVLKYTEGLCWVMHYYYEGVCSWQWFYPYHYA 598
Query: 507 PFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYP 566
PFASDL L L I F LG PF+PFDQLMG PAAS+ ALP +YR LMTDP+SPI FYP
Sbjct: 599 PFASDLSGLGQLNIKFELGTPFKPFDQLMGVFPAASAHALPLQYRRLMTDPNSPIIDFYP 658
Query: 567 PDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVHPQH 626
DF++DMNGKR++WQG+ KLPFIDE LL + KK+E LT EE RNS+M D+L+V+ H
Sbjct: 659 TDFEVDMNGKRYSWQGIAKLPFIDEDRLLAEIKKVEHTLTPEEARRNSIMCDMLFVNGSH 718
Query: 627 PLYQQITLYCQLYHQLPPQDR--FAWEIDVNASGGMNGYIWLCERNGLRSIIPSPVKGLP 684
PL I + LP + R ++D +ASGGMNGYI LC + I SPV GL
Sbjct: 719 PLSPYIYSLNSKFGHLPDKRRNEIKEKLDPSASGGMNGYITLCSGDPCPPIFRSPVDGLE 778
Query: 685 DIERNQAM 692
DI NQ +
Sbjct: 779 DIMDNQVI 786
>gi|359490022|ref|XP_002275560.2| PREDICTED: 5'-3' exoribonuclease 4-like [Vitis vinifera]
Length = 834
Score = 780 bits (2014), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/737 (52%), Positives = 509/737 (69%), Gaps = 48/737 (6%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MG+PAFYRWLADRYPL++V+ VE+ P V GV+ VD ++PNPNG EFDNLYLDMNGII
Sbjct: 1 MGIPAFYRWLADRYPLAVVNAVEDRPAV-VNGVSVAVDTTRPNPNGNEFDNLYLDMNGII 59
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPCFHP+G PAP +Y DVFK++F YID IF LVRPRKLLY+AIDGVAPRAKMNQQR RRF
Sbjct: 60 HPCFHPEGLPAPKTYTDVFKAVFKYIDRIFSLVRPRKLLYMAIDGVAPRAKMNQQRARRF 119
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQ 180
RAAK+AA+ + ERL+ FE ++L+ ++ + DSNVITPGT+FMA+LS+AL+Y+I
Sbjct: 120 RAAKEAADDASGTERLKTVFESEMEMLALLDQTKKLDSNVITPGTEFMALLSSALKYYIH 179
Query: 181 ARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
R+N PGW+ KVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML
Sbjct: 180 LRMNLDPGWRGIKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 239
Query: 241 SLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIHKK 300
+LATHEIHFSILRE + +++K + L GK ++D I ++
Sbjct: 240 ALATHEIHFSILREDVHKAYRKDKNNKPRK-DSLLVNKRGKSKQGEVGGEDIEDF-ISRQ 297
Query: 301 KYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGA 360
K+QFLNIW LR+YL +++ IP+ + ER++DDFVF+C FVGNDFLPHMP+LEI EGA
Sbjct: 298 KFQFLNIWTLRDYLAHDMSIPDRSLKTDLERLIDDFVFMCLFVGNDFLPHMPSLEISEGA 357
Query: 361 INLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQ------- 413
I+LLM VY++EF +GGYLT++ EV L+RVE+F+Q V +E+ IF+KR+++Q+
Sbjct: 358 IDLLMTVYKKEFVQIGGYLTNSSEVYLERVERFMQVVGSHENAIFRKRSQVQKKRGVRFQ 417
Query: 414 -------AYEYN-----EAMKLNARRESSEELLQAPV----------------------- 438
+Y+ E + SS E + P
Sbjct: 418 GSSNKKTVSDYSTTPCVEPQGMTGSSGSSLEPRKTPFCQDSKNSTVKEIQCSTNCISTGA 477
Query: 439 -AVADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSW 497
++ D +KLGE G+KER+Y +KFE ++ ++V++ VLKY+EG+CWV YYYQ VCSW
Sbjct: 478 NSLVDKIKLGEDGWKERFYVEKFEAKTEDDRERVRRHAVLKYIEGICWVMHYYYQGVCSW 537
Query: 498 QWFYPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDP 557
QWFYPYHYAPFASD+ L L+I F LG+PF+PFDQLMG LPAAS+ ALP YR LM D
Sbjct: 538 QWFYPYHYAPFASDIYGLDQLDIQFTLGKPFKPFDQLMGVLPAASAHALPLYYRKLMMDE 597
Query: 558 SSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVML 617
+SPI FYP DF++DMNGKR+ WQ + KLPFI E LL + K+E LT++E RN + +
Sbjct: 598 TSPILDFYPADFELDMNGKRYPWQAICKLPFIKESRLLAEIAKVESTLTDKEKLRNRLGM 657
Query: 618 DLLYVHPQHPLYQQITLYCQLYHQLP--PQDRFAWEIDVNASGGMNGYIWLCERNGLRSI 675
D L++H PL +I + + P P + +ID SGGMNGY+++ +R +
Sbjct: 658 DALFIHISDPLAVKIFSFYKRKKDHPKLPMAKVKRKIDPKFSGGMNGYMYISDRPVWPAE 717
Query: 676 IPSPVKGLPDIERNQAM 692
SP++ + I +N+ +
Sbjct: 718 FYSPIEDMEMIAQNKVI 734
>gi|242080797|ref|XP_002445167.1| hypothetical protein SORBIDRAFT_07g005160 [Sorghum bicolor]
gi|241941517|gb|EES14662.1| hypothetical protein SORBIDRAFT_07g005160 [Sorghum bicolor]
Length = 945
Score = 771 bits (1991), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 421/700 (60%), Positives = 495/700 (70%), Gaps = 93/700 (13%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPAFYRWLA++YP+ +VDVVEE+P PVD SKPNPNG+EFDNLYLDMNGII
Sbjct: 1 MGVPAFYRWLAEKYPMVVVDVVEEEPVEIEGVRV-PVDTSKPNPNGLEFDNLYLDMNGII 59
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPCFHP+ +P+PT++ +VFK +FDYID +F++VRPRKL+Y+AIDGVAPRAKMNQQR+RRF
Sbjct: 60 HPCFHPEDRPSPTTFAEVFKCMFDYIDRLFIMVRPRKLMYMAIDGVAPRAKMNQQRSRRF 119
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQ 180
RAAKDAA+A AEEERLR+EFE G+ L AK++ +TCDSNVITPGT+FMAVLS ALQY+I
Sbjct: 120 RAAKDAADAAAEEERLREEFEREGRRLPAKQQSQTCDSNVITPGTEFMAVLSIALQYYIH 179
Query: 181 ARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
RLN PGW+ KVILSDANVPGEGEHKIMSYIR QRNLPGF+PNTRHCLYGLDADLIML
Sbjct: 180 QRLNYDPGWKKIKVILSDANVPGEGEHKIMSYIRGQRNLPGFNPNTRHCLYGLDADLIML 239
Query: 241 SLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIHKK 300
+LATHE+HFSILREV+ PGQQ+KCF+CGQVGHLAA C GK +++ + + KK
Sbjct: 240 ALATHEVHFSILREVVFTPGQQDKCFLCGQVGHLAANCEGKAKRKAGEYDEKGEAIVPKK 299
Query: 301 KYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGA 360
YQFLNIW LREYL+YE +PNPPF I+FERIVDDF+F+CFFVGNDFLPHMPTLEIREGA
Sbjct: 300 PYQFLNIWTLREYLEYEFRMPNPPFQIDFERIVDDFIFICFFVGNDFLPHMPTLEIREGA 359
Query: 361 INLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQ------A 414
INLLM VY++EF +MGGYLTD+ L+RVE FIQ+V YED+IFQKR R+ Q
Sbjct: 360 INLLMAVYKKEFPSMGGYLTDSCTPDLNRVEHFIQAVGSYEDKIFQKRARLHQRQSERIK 419
Query: 415 YEYNEAMKLN-----------------------------------ARRESSEELLQAP-- 437
E +A + + +RRE + + L+AP
Sbjct: 420 REKAQAKRGDDLDPHVRDDLIVPVANFRGSRLASGAVPSPYEQNGSRRERNSQALKAPRV 479
Query: 438 -----------VAVADTVKLGEPGYKE----------RYYADKFEISNPEEIDKVK---- 472
V ++ E KE R +D F NPEE DKVK
Sbjct: 480 SSSGSSIAAAIVEAEKDLEAQELENKENLKSMLKDALRGKSDVFNSENPEE-DKVKLGEP 538
Query: 473 -----------------------KDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFA 509
+DV LKY EGLCWV YYY+ VCSWQWFYPYHYAPFA
Sbjct: 539 GWRDRYYEDKFGARTPERMEEIRRDVALKYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFA 598
Query: 510 SDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDF 569
SDL+ LS L ITF LG PF+PFDQLMG PAAS+ ALP KYR LMTDP+SPI FYP DF
Sbjct: 599 SDLRSLSQLNITFELGLPFKPFDQLMGVFPAASAHALPLKYRQLMTDPNSPIVDFYPTDF 658
Query: 570 QIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEE 609
++DMNGKRF+WQG+ KLPFIDE LL + KK+E LT E
Sbjct: 659 EVDMNGKRFSWQGIAKLPFIDEDRLLAEIKKVEHTLTSVE 698
>gi|62318783|dbj|BAD93823.1| 5'-3' exoribonuclease 2 [Arabidopsis thaliana]
Length = 1012
Score = 761 bits (1965), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/776 (52%), Positives = 519/776 (66%), Gaps = 87/776 (11%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDP-QVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGI 59
MGVP+FYRWL RYPL+I +V+EE+P +V+G GV P+D SKPNPNG E+DNLYLDMNGI
Sbjct: 1 MGVPSFYRWLIQRYPLTIQEVIEEEPLEVNGGGVTIPIDSSKPNPNGYEYDNLYLDMNGI 60
Query: 60 IHPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRR 119
IHPCFHP+ KP+PT++ +VF+ +FDYID +F++VRPRKLL++AIDGVAPRAKMNQQR RR
Sbjct: 61 IHPCFHPEDKPSPTTFTEVFQCMFDYIDRLFVMVRPRKLLFMAIDGVAPRAKMNQQRARR 120
Query: 120 FRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFI 179
FRAAKDAAEA AEEE+LR+EFE GK L K + DSNVITPGT+FMA LS AL+Y+I
Sbjct: 121 FRAAKDAAEAAAEEEQLREEFEREGKKLPPKVDSQVFDSNVITPGTEFMATLSFALRYYI 180
Query: 180 QARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIM 239
RLN PGW+ KVILSDANVPGEGEHKIMSYIR +N PG++PNT HCLYGLDADLIM
Sbjct: 181 HVRLNSDPGWKNIKVILSDANVPGEGEHKIMSYIRCNKNHPGYNPNTHHCLYGLDADLIM 240
Query: 240 LSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADW-NGVDDTPIH 298
LSLATHEIHFSILREV+ PG++ KCF+CGQ GH AA+C GK + + + +
Sbjct: 241 LSLATHEIHFSILREVVFFPGEEGKCFLCGQEGHRAADCEGKIKRKTGEMLDNTEADVVV 300
Query: 299 KKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIRE 358
KK Y+F+NIW+LREYL++++ IP N +R++DDF+F+CFFVGNDFLPHMPTLEIRE
Sbjct: 301 KKPYEFVNIWILREYLEHDMQIPGA--KKNLDRLIDDFIFICFFVGNDFLPHMPTLEIRE 358
Query: 359 GAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAY--- 415
GAI LLM VY+ +F + YLTD+ ++ L E+FI++V +YE+QIFQKR ++QQ+
Sbjct: 359 GAIELLMSVYKNKFRSAKKYLTDSSKLNLRNDERFIKAVGMYENQIFQKRAQVQQSQSER 418
Query: 416 ----EYNEAMKLNAR------RESSEELLQ------------------------------ 435
+ + + NAR R+ S +L+Q
Sbjct: 419 FRRDKARDKARDNARDNAQASRQFSGKLVQLDSLDEVSDSLHSSPSRKYLRLSLDDNIGV 478
Query: 436 APVAVADTVKLGEPGYKE----------RYYADKFEISNPEEIDKVK------------- 472
A V +++K E +E R D F N E+ DKVK
Sbjct: 479 ANVETENSLKAEELDNEEDLKFKLKKLLRDKGDGFRSGNGEQ-DKVKLNKVGWRERYYEE 537
Query: 473 --------------KDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDL 518
+DVVLKY EGLCW+ YYY VCSW WFYPYHYAPFASDLK L L
Sbjct: 538 KFAAKSVEEMEQIRRDVVLKYTEGLCWIMHYYYHGVCSWNWFYPYHYAPFASDLKGLEKL 597
Query: 519 EITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRF 578
+I F LG PF+PF+QL+ LP+AS+ ALPE YR+LMT+P SPI FYP DF+IDMNGKR+
Sbjct: 598 DIKFELGSPFKPFNQLLAVLPSASAHALPECYRSLMTNPDSPIADFYPADFEIDMNGKRY 657
Query: 579 AWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVHPQHPLYQQITLYCQL 638
+WQG+ KLPF++EK LL ++E LT EE+ RNS + D+L+V HPL + I
Sbjct: 658 SWQGISKLPFVEEKRLLEAAAQVEKSLTNEEIRRNSALFDMLFVVASHPLGELIRSLNSR 717
Query: 639 YHQLPPQDRFAW--EIDVNASGGMNGYIWLCERNGLRSIIPSPVKGLPDIERNQAM 692
+ L ++R +ID S GMNGYI C + S S V+G+ D+ NQ +
Sbjct: 718 TNNLSNEERATIIEKIDPGLSDGMNGYIASCGGDSQPSCFCSTVEGMEDVLTNQVI 773
>gi|15238990|ref|NP_199069.1| 5'-3' exoribonuclease 2 [Arabidopsis thaliana]
gi|75262831|sp|Q9FQ02.1|XRN2_ARATH RecName: Full=5'-3' exoribonuclease 2; AltName: Full=Protein
EXORIBONUCLEASE 2
gi|11875630|gb|AAG40733.1|AF286720_1 XRN2 [Arabidopsis thaliana]
gi|51970342|dbj|BAD43863.1| unnamed protein product [Arabidopsis thaliana]
gi|62319144|dbj|BAD94308.1| 5'-3' exoribonuclease 2 [Arabidopsis thaliana]
gi|332007441|gb|AED94824.1| 5'-3' exoribonuclease 2 [Arabidopsis thaliana]
Length = 1012
Score = 757 bits (1955), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/776 (52%), Positives = 517/776 (66%), Gaps = 87/776 (11%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDP-QVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGI 59
MGVP+FYRWL RYPL+I +V+EE+P +V+G GV P+D SKPNPNG E+DNLYLDMNGI
Sbjct: 1 MGVPSFYRWLIQRYPLTIQEVIEEEPLEVNGGGVTIPIDSSKPNPNGYEYDNLYLDMNGI 60
Query: 60 IHPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRR 119
IHPCFHP+ KP+PT++ +VF+ +FDYID +F++VRPRKLL++AIDGVAPRAKMNQQR RR
Sbjct: 61 IHPCFHPEDKPSPTTFTEVFQCMFDYIDRLFVMVRPRKLLFMAIDGVAPRAKMNQQRARR 120
Query: 120 FRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFI 179
FRAAKDAAEA AEEE+LR+EFE GK L K + DSNVITPGT+FMA LS AL+Y+I
Sbjct: 121 FRAAKDAAEAAAEEEQLREEFEREGKKLPPKVDSQVFDSNVITPGTEFMATLSFALRYYI 180
Query: 180 QARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIM 239
RLN PGW+ KVILSDANVPGEGEHKIMSYIR +N PG++PNT HCLYGLDADLIM
Sbjct: 181 HVRLNSDPGWKNIKVILSDANVPGEGEHKIMSYIRCNKNHPGYNPNTHHCLYGLDADLIM 240
Query: 240 LSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADW-NGVDDTPIH 298
LSLATHEIHFSILREV+ PG++ KCF+CGQ GH AA+C GK + + + +
Sbjct: 241 LSLATHEIHFSILREVVFFPGEEGKCFLCGQEGHRAADCEGKIKRKTGEMLDNTEADVVV 300
Query: 299 KKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIRE 358
KK Y+F+NIW+LREYL++++ IP N +R++DDF+F+CFFVGNDFLPHMPTLEIRE
Sbjct: 301 KKPYEFVNIWILREYLEHDMQIPGA--KKNLDRLIDDFIFICFFVGNDFLPHMPTLEIRE 358
Query: 359 GAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAY--- 415
GAI LLM VY+ +F + YLTD+ ++ L VE+FI++V +YE+QIFQKR ++QQ
Sbjct: 359 GAIELLMSVYKNKFRSAKKYLTDSSKLNLRNVERFIKAVGMYENQIFQKRAQVQQRQSER 418
Query: 416 ----EYNEAMKLNAR------RESSEELLQ------------------------------ 435
+ + + NAR R+ S +L+Q
Sbjct: 419 FRRDKARDKARDNARDNAQASRQFSGKLVQLDSLDEVSDSLHSSPSRKYLRLSLDDNIGV 478
Query: 436 APVAVADTVKLGEPGYKE----------RYYADKFEISNPEEIDKVKKDVV--------- 476
A V +++K E +E R D F N E+ DKVK + V
Sbjct: 479 ANVETENSLKAEELDNEEDLKFKLKKLLRDKGDGFRSGNGEQ-DKVKLNKVGWRERYYEE 537
Query: 477 ------------------LKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDL 518
LKY EGLCW+ YYY VCSW WFYPYHYAPFASDLK L L
Sbjct: 538 KFAAKSVEEMEQIRRDVVLKYTEGLCWIMHYYYHGVCSWNWFYPYHYAPFASDLKGLEKL 597
Query: 519 EITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRF 578
+I F LG PF+PF+QL+ LP+AS+ ALPE YR+LMT+P SPI FYP DF+IDMNGKR+
Sbjct: 598 DIKFELGSPFKPFNQLLAVLPSASAHALPECYRSLMTNPDSPIADFYPADFEIDMNGKRY 657
Query: 579 AWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVHPQHPLYQQITLYCQL 638
+WQG+ KLPF++EK LL ++E LT EE+ RNS + D+L+V HPL + I
Sbjct: 658 SWQGISKLPFVEEKRLLEAAAQVEKSLTNEEIRRNSALFDMLFVVASHPLGELIRSLNSR 717
Query: 639 YHQLPPQDRFAW--EIDVNASGGMNGYIWLCERNGLRSIIPSPVKGLPDIERNQAM 692
+ L ++R +ID S GMNGYI C + S S V+G+ D+ NQ +
Sbjct: 718 TNNLSNEERATIIEKIDPGLSDGMNGYIASCGGDSQPSCFCSTVEGMEDVLTNQVI 773
>gi|13605795|gb|AAK32883.1|AF367296_1 AT5g42540/K16E1_1 [Arabidopsis thaliana]
gi|20147139|gb|AAM10286.1| AT5g42540/K16E1_1 [Arabidopsis thaliana]
Length = 813
Score = 756 bits (1951), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/776 (52%), Positives = 517/776 (66%), Gaps = 87/776 (11%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDP-QVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGI 59
MGVP+FYRWL RYPL+I +V+EE+P +V+G GV P+D SKPNPNG E+DNLYLDMNGI
Sbjct: 1 MGVPSFYRWLIQRYPLTIQEVIEEEPLEVNGGGVTIPIDSSKPNPNGYEYDNLYLDMNGI 60
Query: 60 IHPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRR 119
IHPCFHP+ KP+PT++ +VF+ +FDYID +F++VRPRKLL++AIDGVAPRAKMNQQR RR
Sbjct: 61 IHPCFHPEDKPSPTTFTEVFQCMFDYIDRLFVMVRPRKLLFMAIDGVAPRAKMNQQRARR 120
Query: 120 FRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFI 179
FRAAKDAAEA AEEE+LR+EFE GK L K + DSNVITPGT+FMA LS AL+Y+I
Sbjct: 121 FRAAKDAAEAAAEEEQLREEFEREGKKLPPKVDSQVFDSNVITPGTEFMATLSFALRYYI 180
Query: 180 QARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIM 239
RLN PGW+ KVILSDANVPGEGEHKIMSYIR +N PG++PNT HCLYGLDADLIM
Sbjct: 181 HVRLNSDPGWKNIKVILSDANVPGEGEHKIMSYIRCNKNHPGYNPNTHHCLYGLDADLIM 240
Query: 240 LSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADW-NGVDDTPIH 298
LSLATHEIHFSILREV+ PG++ KCF+CGQ GH AA+C GK + + + +
Sbjct: 241 LSLATHEIHFSILREVVFFPGEEGKCFLCGQEGHRAADCEGKIKRKTGEMLDNTEADVVV 300
Query: 299 KKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIRE 358
KK Y+F+NIW+LREYL++++ IP N +R++DDF+F+CFFVGNDFLPHMPTLEIRE
Sbjct: 301 KKPYEFVNIWILREYLEHDMQIPGA--KKNLDRLIDDFIFICFFVGNDFLPHMPTLEIRE 358
Query: 359 GAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAY--- 415
GAI LLM VY+ +F + YLTD+ ++ L VE+FI++V +YE+QIFQKR ++QQ
Sbjct: 359 GAIELLMSVYKNKFRSAKKYLTDSSKLNLRNVERFIKAVGMYENQIFQKRAQVQQRQSER 418
Query: 416 ----EYNEAMKLNAR------RESSEELLQ------------------------------ 435
+ + + NAR R+ S +L+Q
Sbjct: 419 FRRDKARDKARDNARDNAQASRQFSGKLVQLDSLDEVSDSLHSSPSRKYLRLSLDDNIGV 478
Query: 436 APVAVADTVKLGEPGYKE----------RYYADKFEISNPEEIDKVKKDVV--------- 476
A V +++K E +E R D F N E+ DKVK + V
Sbjct: 479 ANVETENSLKAEELDNEEDLKFKLKKLLRDKGDGFRSGNGEQ-DKVKLNKVGWRERYYEE 537
Query: 477 ------------------LKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDL 518
LKY EGLCW+ YYY VCSW WFYPYHYAPFASDLK L L
Sbjct: 538 KFAAKSVEEMEQIRRDVVLKYTEGLCWIMHYYYHGVCSWNWFYPYHYAPFASDLKGLEKL 597
Query: 519 EITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRF 578
+I F LG PF+PF+QL+ LP+AS+ ALPE YR+LMT+P SPI FYP DF+IDMNGKR+
Sbjct: 598 DIKFELGSPFKPFNQLLAVLPSASAHALPECYRSLMTNPDSPIADFYPADFEIDMNGKRY 657
Query: 579 AWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVHPQHPLYQQITLYCQL 638
+WQG+ KLPF++EK LL ++E LT EE+ RNS + D+L+V HPL + I
Sbjct: 658 SWQGISKLPFVEEKRLLEAAAQVEKSLTNEEIRRNSALFDMLFVVASHPLGELIRSLNSR 717
Query: 639 YHQLPPQDR--FAWEIDVNASGGMNGYIWLCERNGLRSIIPSPVKGLPDIERNQAM 692
+ L ++R +ID S GMNGYI C + S S V+G+ D+ NQ +
Sbjct: 718 TNNLSNEERATIIEKIDPGLSDGMNGYIASCGGDSQPSCFCSTVEGMEDVLTNQVI 773
>gi|297737374|emb|CBI26575.3| unnamed protein product [Vitis vinifera]
Length = 845
Score = 752 bits (1942), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/737 (51%), Positives = 496/737 (67%), Gaps = 67/737 (9%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MG+PAFYRWLADRYPL++V+ VE+ P V FDNLYLDMNGII
Sbjct: 1 MGIPAFYRWLADRYPLAVVNAVEDRPAV--------------------FDNLYLDMNGII 40
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPCFHP+G PAP +Y DVFK++F YID IF LVRPRKLLY+AIDGVAPRAKMNQQR RRF
Sbjct: 41 HPCFHPEGLPAPKTYTDVFKAVFKYIDRIFSLVRPRKLLYMAIDGVAPRAKMNQQRARRF 100
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQ 180
RAAK+AA+ + ERL+ FE ++L+ ++ + DSNVITPGT+FMA+LS+AL+Y+I
Sbjct: 101 RAAKEAADDASGTERLKTVFESEMEMLALLDQTKKLDSNVITPGTEFMALLSSALKYYIH 160
Query: 181 ARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
R+N PGW+ KVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML
Sbjct: 161 LRMNLDPGWRGIKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 220
Query: 241 SLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIHKK 300
+LATHEIHFSILRE + +++K + L GK ++D I ++
Sbjct: 221 ALATHEIHFSILREDVHKAYRKDKNNK-PRKDSLLVNKRGKSKQGEVGGEDIEDF-ISRQ 278
Query: 301 KYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGA 360
K+QFLNIW LR+YL +++ IP+ + ER++DDFVF+C FVGNDFLPHMP+LEI EGA
Sbjct: 279 KFQFLNIWTLRDYLAHDMSIPDRSLKTDLERLIDDFVFMCLFVGNDFLPHMPSLEISEGA 338
Query: 361 INLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQ------- 413
I+LLM VY++EF +GGYLT++ EV L+RVE+F+Q V +E+ IF+KR+++Q+
Sbjct: 339 IDLLMTVYKKEFVQIGGYLTNSSEVYLERVERFMQVVGSHENAIFRKRSQVQKKRGVRFQ 398
Query: 414 -------AYEYN-----EAMKLNARRESSEELLQAPV----------------------- 438
+Y+ E + SS E + P
Sbjct: 399 GSSNKKTVSDYSTTPCVEPQGMTGSSGSSLEPRKTPFCQDSKNSTVKEIQCSTNCISTGA 458
Query: 439 -AVADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSW 497
++ D +KLGE G+KER+Y +KFE ++ ++V++ VLKY+EG+CWV YYYQ VCSW
Sbjct: 459 NSLVDKIKLGEDGWKERFYVEKFEAKTEDDRERVRRHAVLKYIEGICWVMHYYYQGVCSW 518
Query: 498 QWFYPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDP 557
QWFYPYHYAPFASD+ L L+I F LG+PF+PFDQLMG LPAAS+ ALP YR LM D
Sbjct: 519 QWFYPYHYAPFASDIYGLDQLDIQFTLGKPFKPFDQLMGVLPAASAHALPLYYRKLMMDE 578
Query: 558 SSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVML 617
+SPI FYP DF++DMNGKR+ WQ + KLPFI E LL + K+E LT++E RN + +
Sbjct: 579 TSPILDFYPADFELDMNGKRYPWQAICKLPFIKESRLLAEIAKVESTLTDKEKLRNRLGM 638
Query: 618 DLLYVHPQHPLYQQITLYCQLYHQLP--PQDRFAWEIDVNASGGMNGYIWLCERNGLRSI 675
D L++H PL +I + + P P + +ID SGGMNGY+++ +R +
Sbjct: 639 DALFIHISDPLAVKIFSFYKRKKDHPKLPMAKVKRKIDPKFSGGMNGYMYISDRPVWPAE 698
Query: 676 IPSPVKGLPDIERNQAM 692
SP++ + I +N+ +
Sbjct: 699 FYSPIEDMEMIAQNKVI 715
>gi|334188143|ref|NP_001190450.1| 5'-3' exoribonuclease 2 [Arabidopsis thaliana]
gi|332007442|gb|AED94825.1| 5'-3' exoribonuclease 2 [Arabidopsis thaliana]
Length = 1023
Score = 749 bits (1934), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/787 (51%), Positives = 517/787 (65%), Gaps = 98/787 (12%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDP-QVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGI 59
MGVP+FYRWL RYPL+I +V+EE+P +V+G GV P+D SKPNPNG E+DNLYLDMNGI
Sbjct: 1 MGVPSFYRWLIQRYPLTIQEVIEEEPLEVNGGGVTIPIDSSKPNPNGYEYDNLYLDMNGI 60
Query: 60 IHPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRR 119
IHPCFHP+ KP+PT++ +VF+ +FDYID +F++VRPRKLL++AIDGVAPRAKMNQQR RR
Sbjct: 61 IHPCFHPEDKPSPTTFTEVFQCMFDYIDRLFVMVRPRKLLFMAIDGVAPRAKMNQQRARR 120
Query: 120 FRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFI 179
FRAAKDAAEA AEEE+LR+EFE GK L K + DSNVITPGT+FMA LS AL+Y+I
Sbjct: 121 FRAAKDAAEAAAEEEQLREEFEREGKKLPPKVDSQVFDSNVITPGTEFMATLSFALRYYI 180
Query: 180 QARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIM 239
RLN PGW+ KVILSDANVPGEGEHKIMSYIR +N PG++PNT HCLYGLDADLIM
Sbjct: 181 HVRLNSDPGWKNIKVILSDANVPGEGEHKIMSYIRCNKNHPGYNPNTHHCLYGLDADLIM 240
Query: 240 LSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADW-NGVDDTPIH 298
LSLATHEIHFSILREV+ PG++ KCF+CGQ GH AA+C GK + + + +
Sbjct: 241 LSLATHEIHFSILREVVFFPGEEGKCFLCGQEGHRAADCEGKIKRKTGEMLDNTEADVVV 300
Query: 299 KKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIRE 358
KK Y+F+NIW+LREYL++++ IP N +R++DDF+F+CFFVGNDFLPHMPTLEIRE
Sbjct: 301 KKPYEFVNIWILREYLEHDMQIPGA--KKNLDRLIDDFIFICFFVGNDFLPHMPTLEIRE 358
Query: 359 GAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAY--- 415
GAI LLM VY+ +F + YLTD+ ++ L VE+FI++V +YE+QIFQKR ++QQ
Sbjct: 359 GAIELLMSVYKNKFRSAKKYLTDSSKLNLRNVERFIKAVGMYENQIFQKRAQVQQRQSER 418
Query: 416 ----EYNEAMKLNAR------RESSEELLQ------------------------------ 435
+ + + NAR R+ S +L+Q
Sbjct: 419 FRRDKARDKARDNARDNAQASRQFSGKLVQLDSLDEVSDSLHSSPSRKYLRLSLDDNIGV 478
Query: 436 APVAVADTVKLGEPGYKE----------RYYADKFEISNPEEIDKVKKDVV--------- 476
A V +++K E +E R D F N E+ DKVK + V
Sbjct: 479 ANVETENSLKAEELDNEEDLKFKLKKLLRDKGDGFRSGNGEQ-DKVKLNKVGWRERYYEE 537
Query: 477 ------------------LKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDL 518
LKY EGLCW+ YYY VCSW WFYPYHYAPFASDLK L L
Sbjct: 538 KFAAKSVEEMEQIRRDVVLKYTEGLCWIMHYYYHGVCSWNWFYPYHYAPFASDLKGLEKL 597
Query: 519 EITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRF 578
+I F LG PF+PF+QL+ LP+AS+ ALPE YR+LMT+P SPI FYP DF+IDMNGKR+
Sbjct: 598 DIKFELGSPFKPFNQLLAVLPSASAHALPECYRSLMTNPDSPIADFYPADFEIDMNGKRY 657
Query: 579 AWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVHPQHPLYQQITLYCQL 638
+WQG+ KLPF++EK LL ++E LT EE+ RNS + D+L+V HPL + I
Sbjct: 658 SWQGISKLPFVEEKRLLEAAAQVEKSLTNEEIRRNSALFDMLFVVASHPLGELIRSLNSR 717
Query: 639 YHQLPPQDRFAW--EIDVN-----------ASGGMNGYIWLCERNGLRSIIPSPVKGLPD 685
+ L ++R +ID S GMNGYI C + S S V+G+ D
Sbjct: 718 TNNLSNEERATIIEKIDPGLSEHIQKFLDVCSDGMNGYIASCGGDSQPSCFCSTVEGMED 777
Query: 686 IERNQAM 692
+ NQ +
Sbjct: 778 VLTNQVI 784
>gi|293333211|ref|NP_001170327.1| uncharacterized protein LOC100384297 [Zea mays]
gi|224035107|gb|ACN36629.1| unknown [Zea mays]
gi|413932823|gb|AFW67374.1| hypothetical protein ZEAMMB73_239358 [Zea mays]
Length = 490
Score = 743 bits (1919), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/500 (75%), Positives = 421/500 (84%), Gaps = 11/500 (2%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPAFYRWLADRYPL++ D EE+P G PVD+ +PNPNG+EFDNLYLDMNGII
Sbjct: 1 MGVPAFYRWLADRYPLTVSDAEEEEPVELEPGAFVPVDLRRPNPNGLEFDNLYLDMNGII 60
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPCFHP+G+PAPT+YD+VFKSIFDYIDH+F L+RPRKLLY+AIDGVAPRAKMNQQR+RRF
Sbjct: 61 HPCFHPEGRPAPTTYDEVFKSIFDYIDHLFGLIRPRKLLYMAIDGVAPRAKMNQQRSRRF 120
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQ 180
RAAKDAA+A AEEERLRKEFE G+ L+ KEK E DSNVITPGT+FM VLS ALQY+IQ
Sbjct: 121 RAAKDAADAAAEEERLRKEFEAEGRTLAQKEKSEAIDSNVITPGTEFMFVLSTALQYYIQ 180
Query: 181 ARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
RLN GWQ K+ILSD+NVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML
Sbjct: 181 LRLNHTLGWQSVKIILSDSNVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
Query: 241 SLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIHKK 300
+LATHE+HFSILREVI++PGQ EKCF+CGQVGHLAAEC G + N V+ PIHKK
Sbjct: 241 ALATHEVHFSILREVISMPGQHEKCFLCGQVGHLAAECRGPSQPD----NSVELPPIHKK 296
Query: 301 KYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGA 360
KYQFLNIWVLREYL +L+I + PF INFER++DDFVF+CFFVGNDFLPHMPTLEIREGA
Sbjct: 297 KYQFLNIWVLREYLAKDLEIIDAPFKINFERLIDDFVFMCFFVGNDFLPHMPTLEIREGA 356
Query: 361 INLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYEYNEA 420
INLLM +YR EFT+MGGYLTD GEV+LDRVE FIQSVAV E+QIFQKR RIQQA E NE
Sbjct: 357 INLLMSIYRSEFTSMGGYLTDVGEVILDRVEHFIQSVAVNEEQIFQKRARIQQARENNEE 416
Query: 421 MKLNARRESSEELLQAPVAVADTVKLGEPGYKERYYADKF-EISNPEEIDKVKKDVVLKY 479
K +RE+SEE D VKLGEPGY+ERYYADKF E + + I +V++DVV KY
Sbjct: 417 -KHKMQRENSEE-----DQYVDKVKLGEPGYRERYYADKFKEEAESKPIVQVRRDVVQKY 470
Query: 480 VEGLCWVCRYYYQDVCSWQW 499
VEGLCWV RYYYQ VCSWQW
Sbjct: 471 VEGLCWVMRYYYQGVCSWQW 490
>gi|255557927|ref|XP_002519992.1| 5'->3' exoribonuclease, putative [Ricinus communis]
gi|223540756|gb|EEF42316.1| 5'->3' exoribonuclease, putative [Ricinus communis]
Length = 1545
Score = 737 bits (1902), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/726 (51%), Positives = 491/726 (67%), Gaps = 51/726 (7%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MG+P+FY+WL ++YP ++VDV+E ++ G GV P++ + PNPNG+EFDNLYLDMNGII
Sbjct: 1 MGIPSFYKWLTEKYPDTVVDVIEARRRM-GNGVLLPINTALPNPNGIEFDNLYLDMNGII 59
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPCFHP P P +Y++VF+++F YID IF +VRPRKLL+L IDGVAPRAKMNQQR+RRF
Sbjct: 60 HPCFHPSDLPPPKTYEEVFRNVFMYIDKIFSMVRPRKLLFLGIDGVAPRAKMNQQRSRRF 119
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQ 180
RAAK EAE E ++++ E G+ ++ ++P DSNVITPGT+FM +LS+AL+Y+I+
Sbjct: 120 RAAK---EAEKEALKMKQFIELEGENSTSLKEPAVLDSNVITPGTEFMDLLSSALRYYIR 176
Query: 181 ARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
R+N+ GW+ KVILSD+NVPGEGEHKIMSYIRLQR+LPG+DPNTRHCLYGLDADLIML
Sbjct: 177 LRVNRDSGWRGIKVILSDSNVPGEGEHKIMSYIRLQRDLPGYDPNTRHCLYGLDADLIML 236
Query: 241 SLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVD--DTPIH 298
+LATHE+HF+ILREV Q+ G+ K W V + +
Sbjct: 237 ALATHEVHFTILREVCA----QKHSSKRGKKHKFVWNPQKKANSKKKKWMPVKTLEEYVS 292
Query: 299 KKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIRE 358
+ ++FL IW LRE+L+Y++ IPN + ER++DDF+F+C FVGNDFLPH+PTLEI +
Sbjct: 293 RLNFKFLYIWALREHLEYDMRIPNLALQTDLERLIDDFIFMCLFVGNDFLPHIPTLEISQ 352
Query: 359 GAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYEYN 418
GAI+LLM VYR+EF MGGYLT++ E+ L RVE FIQ+V +++D IF R IQ+ E +
Sbjct: 353 GAIDLLMKVYRKEFRRMGGYLTNSFELDLTRVEHFIQAVGLHDDAIF--RQHIQKLKEKS 410
Query: 419 EAMKLNARRESSEELLQ-------------------------APV----AVADTVKLGEP 449
+ + + E+LLQ P+ A DT E
Sbjct: 411 ARKEERSSKRKLEKLLQNDPHAESISGGSSLLMEKAGGMNFDEPIHHLSAGIDTGDKEED 470
Query: 450 GYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFA 509
+KERYYA KF+ +E + +++DVV+KY+EGLCWV RYYY+ VCSWQWFYPYHYAPFA
Sbjct: 471 DWKERYYAKKFKAKTKDEQESIRRDVVIKYMEGLCWVMRYYYEGVCSWQWFYPYHYAPFA 530
Query: 510 SDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDF 569
SD L DL+I F LG PF+P DQLMG LPAAS+ ALP YR LMTD SSPI FYP DF
Sbjct: 531 SDFYGLDDLKIQFTLGVPFKPMDQLMGVLPAASAHALPMLYRKLMTDESSPILDFYPSDF 590
Query: 570 QIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVHPQHPLY 629
++DMNGKR WQ + KLPFIDE LL + K+E LT++E RNS+ + L+VH HPL
Sbjct: 591 ELDMNGKRRKWQAICKLPFIDESRLLSEITKVEHTLTDDERRRNSLGSNFLFVHISHPLA 650
Query: 630 QQITLYCQLYHQLPPQDR---FAWEIDVNASGGMNGYIWLCERNGLRSIIPSPVKGLPDI 686
I + + Q+R +ID SGGMNG++++ + + SPV G+ I
Sbjct: 651 DMIIYFFK-------QNRDPNVLLKIDPELSGGMNGFVYISDNAVCPEEVSSPVDGMRMI 703
Query: 687 ERNQAM 692
N+ +
Sbjct: 704 AHNRVI 709
>gi|224123990|ref|XP_002319214.1| predicted protein [Populus trichocarpa]
gi|222857590|gb|EEE95137.1| predicted protein [Populus trichocarpa]
Length = 692
Score = 728 bits (1880), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/700 (55%), Positives = 490/700 (70%), Gaps = 42/700 (6%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MG+PAFYRWL ++YPL DV+EE P + GV+ P+D S PNPNG+EFDNLYLDMNGII
Sbjct: 1 MGIPAFYRWLTEKYPLITADVMEETPLLIN-GVSVPLDTSCPNPNGIEFDNLYLDMNGII 59
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPCFHP+G P PT+Y++VF ++F YID IF ++RPRKLL++AIDGVAPRAKMNQQR+RRF
Sbjct: 60 HPCFHPEGLPPPTTYEEVFAAVFKYIDRIFSIIRPRKLLFMAIDGVAPRAKMNQQRSRRF 119
Query: 121 RAAKDAAEAEAEEER---LRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQY 177
RAA+DAA+ E + E EE G L E+ + DSNVITPGT+FM +LS+AL Y
Sbjct: 120 RAARDAADQALSIETDGGIVPESEE-GNL----EQVKKLDSNVITPGTEFMDLLSSALHY 174
Query: 178 FIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADL 237
+I+ R+ + GW+ KVILSDANV GEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADL
Sbjct: 175 YIRLRMKEDLGWRGIKVILSDANVAGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADL 234
Query: 238 IMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPI 297
IML+LA+HEIHFSILRE L G + QVG A + I
Sbjct: 235 IMLALASHEIHFSILRERRKLNGDSD------QVGKFAENI---------------ENHI 273
Query: 298 HKKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIR 357
K+QFLN+W+LREYL Y+L IP+ ++ ER++DDFVF+C FVGNDFLPH+P+LEI
Sbjct: 274 SGMKFQFLNVWILREYLAYDLRIPDTTLKVDLERVIDDFVFMCLFVGNDFLPHIPSLEIS 333
Query: 358 EGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYEY 417
EGAI+LLM VY++EF MGGYLT++ E+ L RVE F+Q++ +E IF++R ++
Sbjct: 334 EGAIDLLMTVYKKEFAQMGGYLTNSFEINLIRVEHFVQALGSHESAIFRRRNQVSLNDLE 393
Query: 418 NEAMKLNARRE---SSEELLQAPVAVADTVKLGEPGYKERYYADKFEISNPEEIDKVKKD 474
+++ R++ SS+ L D +KLG+ G+KERYYA+KFE + +E D +++
Sbjct: 394 IRFQRISKRQQAFHSSKSLFD------DGIKLGDEGWKERYYAEKFEAKSEDERDTIRRH 447
Query: 475 VVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQL 534
V KYVEG+CWV RYYY+ VCSWQWFYPYHYAPFASD LEI F LGEPF+PFDQL
Sbjct: 448 AVFKYVEGICWVMRYYYEGVCSWQWFYPYHYAPFASDFYGCDQLEIHFTLGEPFKPFDQL 507
Query: 535 MGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLL 594
M LPAAS+ ALP YR LM D SSPI FYP DF++D NGKRF+WQ + KLPFI+E L
Sbjct: 508 MAVLPAASAHALPLFYRKLMIDASSPILDFYPTDFELDNNGKRFSWQAICKLPFIEESRL 567
Query: 595 LRQTKKLEVFLTEEELFRNSVMLDLLYVHPQHPL-YQQITLY-CQLYHQLPPQDRFAWEI 652
+ + K+E LT+EE RN + D+L VH HPL + I+L+ C+ LP + +I
Sbjct: 568 VSEITKVEHTLTDEERRRNRLGYDVLCVHVSHPLAVKVISLFECKDQSALPTANG-KLKI 626
Query: 653 DVNASGGMNGYIWLCERNGLRSIIPSPVKGLPDIERNQAM 692
D SGGMNGYI++ E+ I SP+ G+ I Q +
Sbjct: 627 DPKISGGMNGYIYISEKPEWPLGIFSPIDGMLMIASEQVI 666
>gi|147793034|emb|CAN59715.1| hypothetical protein VITISV_006076 [Vitis vinifera]
Length = 1102
Score = 709 bits (1829), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 348/601 (57%), Positives = 440/601 (73%), Gaps = 27/601 (4%)
Query: 5 AFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGIIHPCF 64
AFYRWLADRYPL++V+ VE+ P V GV+ VD ++PNPNG EFDNLYLDMNGIIHPCF
Sbjct: 136 AFYRWLADRYPLAVVNAVEDRPAV-VNGVSVAVDTTRPNPNGNEFDNLYLDMNGIIHPCF 194
Query: 65 HPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRFRAAK 124
HP+G PAP +Y DVFK++F YID IF LVRPRKLLY+AIDGVAPRAKMNQQR RRFRAAK
Sbjct: 195 HPEGLPAPKTYTDVFKAVFKYIDRIFSLVRPRKLLYMAIDGVAPRAKMNQQRARRFRAAK 254
Query: 125 DAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQARLN 184
+AA+ + ERL+ FE ++L+ ++ + DSNVITPGT+FMA+LS+AL+Y+I R+N
Sbjct: 255 EAADDASGTERLKTVFESEMEMLALLDQTKKLDSNVITPGTEFMALLSSALKYYIHLRMN 314
Query: 185 QIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIMLSLAT 244
PGW+ KVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML+LAT
Sbjct: 315 LDPGWRGIKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIMLALAT 374
Query: 245 HEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIHKKKYQF 304
HEIHFSILRE + +++K + L G ++D I ++K+QF
Sbjct: 375 HEIHFSILREDVHKAYRKDKNNK-PRKDSLLVNKRGXSKQGEVGGEDIEDF-ISRQKFQF 432
Query: 305 LNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLL 364
LNIW LR+YL +++ IP+ + ER++DDFVF+C FVGNDFLPHMP+LEI EGAI+LL
Sbjct: 433 LNIWTLRDYLAHDMSIPDRSLKTDLERLIDDFVFMCLFVGNDFLPHMPSLEISEGAIDLL 492
Query: 365 MHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQ----------- 413
M VY++EF +GGYLT++ EV L+RVE+F+Q V +E+ IF+KR+++Q+
Sbjct: 493 MTVYKKEFVQIGGYLTNSSEVYLERVERFMQVVGSHENAIFRKRSQVQKKRGVRFQGSSN 552
Query: 414 ---AYEYN-----EAMKLNARRESSEELLQAPVAV-ADTVKLGEPGYKERYYADKFEISN 464
+Y+ E + SS E + P + +KLGE G+KER+Y +KFE
Sbjct: 553 KKTVSDYSTTPCVEPQGMTGSSGSSLEPRKTPFCQDSKNIKLGEDGWKERFYVEKFEAKT 612
Query: 465 PEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDLEITFFL 524
++ ++V++ VLKY+EG+CWV YYYQ VCSWQWFYPYHYAPFASD+ L L+I F L
Sbjct: 613 EDDRERVRRHAVLKYIEGICWVMHYYYQGVCSWQWFYPYHYAPFASDIYGLDQLDIQFTL 672
Query: 525 GEPFRPFDQLMGTLPAA----SSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAW 580
G+PF+PFDQLMG LPAA S+ ALP YR LM D +SPI FYP DF++DMNGKR+ W
Sbjct: 673 GKPFKPFDQLMGVLPAARCTYSAHALPLYYRKLMMDETSPILDFYPADFELDMNGKRYPW 732
Query: 581 Q 581
Q
Sbjct: 733 Q 733
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 31/52 (59%)
Query: 581 QGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVHPQHPLYQQI 632
+ KLPFI E LL + K+E LT++E RN + +D L++H PL +I
Sbjct: 806 HAICKLPFIKESRLLAEIAKVESTLTDKEKLRNRLGMDALFIHISDPLAVKI 857
>gi|298204908|emb|CBI34215.3| unnamed protein product [Vitis vinifera]
Length = 1083
Score = 697 bits (1798), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/415 (84%), Positives = 379/415 (91%), Gaps = 12/415 (2%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPAFYRWLADRYPL+++DVVEE+P EG A +DVS+PNPNGMEFDNLYLDMNGII
Sbjct: 1 MGVPAFYRWLADRYPLAVMDVVEEEP---SEGGAE-IDVSRPNPNGMEFDNLYLDMNGII 56
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPCFHPDGKPAPT+YDDVFKSIFDYIDH+F LVRPR+LLY+AIDGVAPRAKMNQQR+RRF
Sbjct: 57 HPCFHPDGKPAPTTYDDVFKSIFDYIDHLFSLVRPRRLLYMAIDGVAPRAKMNQQRSRRF 116
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQ 180
RAAKDAAEAEAEEERLRKEFE GK+LS KEKPET DSNVITPGT+FMAVLS ALQY+I
Sbjct: 117 RAAKDAAEAEAEEERLRKEFEVEGKMLSPKEKPETSDSNVITPGTKFMAVLSVALQYYIH 176
Query: 181 ARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
+RLN+ PGW TKVILSD+NVPGEGEHKIMSYIR QRNL GF+PNTRHCLYGLDADLIML
Sbjct: 177 SRLNRNPGWCSTKVILSDSNVPGEGEHKIMSYIRSQRNLLGFNPNTRHCLYGLDADLIML 236
Query: 241 SLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIHKK 300
SLATHE+HFSILRE+IT PGQQEKC++CGQVGHLAAEC G VDDTPIHKK
Sbjct: 237 SLATHEVHFSILREMITPPGQQEKCYLCGQVGHLAAECRG--------IEVVDDTPIHKK 288
Query: 301 KYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGA 360
KYQFLNIWVLREYLQY+L+I NPPF INFER++DDFVFLCFFVGNDFLPHMPTLEIREGA
Sbjct: 289 KYQFLNIWVLREYLQYDLEILNPPFEINFERLLDDFVFLCFFVGNDFLPHMPTLEIREGA 348
Query: 361 INLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAY 415
INLLMHVYRREF+AMGGYLTDAGEVLLDRVE FI+SVAVYEDQIFQKRTRIQQ +
Sbjct: 349 INLLMHVYRREFSAMGGYLTDAGEVLLDRVEHFIESVAVYEDQIFQKRTRIQQRF 403
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 195/293 (66%), Positives = 225/293 (76%), Gaps = 4/293 (1%)
Query: 402 DQIFQKRTRIQQAYEYNEAMKLNARRESSEELLQAPVAVAD---TVKLGEPGYKERYYAD 458
D + ++ TR ++ E +L+ S+E +L+ A + VKLGEPGYKERYY +
Sbjct: 627 DDLEKEFTRCREE-EMGRRQQLDPNNPSAERMLEEEAASHEYSFQVKLGEPGYKERYYTE 685
Query: 459 KFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDL 518
KF +SNPEEIDKV+K++V+KYVEGLCWVCRYYYQ VCSWQW+YP+HYAPFASDLKDL DL
Sbjct: 686 KFNLSNPEEIDKVRKEIVMKYVEGLCWVCRYYYQGVCSWQWYYPFHYAPFASDLKDLVDL 745
Query: 519 EITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRF 578
EITFFLGEPF+PFDQLMGTLPAAS+S+LPE YR LMTD SSPI FYP DF+IDMNGKR+
Sbjct: 746 EITFFLGEPFKPFDQLMGTLPAASASSLPENYRKLMTDQSSPILDFYPSDFEIDMNGKRY 805
Query: 579 AWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVHPQHPLYQQITLYCQL 638
AWQGV KLPFIDE+ LL +TKKLEV LT EE RNSVM DLLYVH HPL QI Y
Sbjct: 806 AWQGVAKLPFIDEEKLLAETKKLEVTLTVEEQVRNSVMFDLLYVHAVHPLATQIIYYYHF 865
Query: 639 YHQLPPQDRFAWEIDVNASGGMNGYIWLCERNGLRSIIPSPVKGLPDIERNQA 691
Y PP R W ID+NASGGMNGY+WLCERNG RS PS + GL +IE NQ
Sbjct: 866 YQSSPPLARVIWPIDINASGGMNGYLWLCERNGWRSEFPSSISGLQNIEHNQV 918
>gi|9759012|dbj|BAB09325.1| 5'-3' exoribonuclease 2 [Arabidopsis thaliana]
Length = 746
Score = 691 bits (1782), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/734 (51%), Positives = 490/734 (66%), Gaps = 92/734 (12%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDP-QVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGI 59
MGVP+FYRWL RYPL+I +V+EE+P +V+G GV P+D SKPNPNG E+DNLYLDMNGI
Sbjct: 1 MGVPSFYRWLIQRYPLTIQEVIEEEPLEVNGGGVTIPIDSSKPNPNGYEYDNLYLDMNGI 60
Query: 60 IHPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRR 119
IHPCFHP+ KP+PT++ +VF+ +FDYID +F++VRPRKLL++AIDGVAPRAKMNQQR RR
Sbjct: 61 IHPCFHPEDKPSPTTFTEVFQCMFDYIDRLFVMVRPRKLLFMAIDGVAPRAKMNQQRARR 120
Query: 120 FRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFI 179
FRAAKDAAEA AEEE+LR+EFE GK L K + DSNVITPGT+FMA LS AL+Y+I
Sbjct: 121 FRAAKDAAEAAAEEEQLREEFEREGKKLPPKVDSQVFDSNVITPGTEFMATLSFALRYYI 180
Query: 180 QARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIM 239
RLN PGW+ KVILSDANVPGEGEHKIMSYIR +N PG++PNT HCLYGLDADLIM
Sbjct: 181 HVRLNSDPGWKNIKVILSDANVPGEGEHKIMSYIRCNKNHPGYNPNTHHCLYGLDADLIM 240
Query: 240 LSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADW-NGVDDTPIH 298
LSLATHEIHFSILREV PG++ KCF+CGQ GH AA+C GK + + + +
Sbjct: 241 LSLATHEIHFSILREVF-FPGEEGKCFLCGQEGHRAADCEGKIKRKTGEMLDNTEADVVV 299
Query: 299 KKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIRE 358
KK Y+F+NIW+LREYL++++ IP N +R++DDF+F+CFFVGNDFLPHMPTLEIRE
Sbjct: 300 KKPYEFVNIWILREYLEHDMQIPGA--KKNLDRLIDDFIFICFFVGNDFLPHMPTLEIRE 357
Query: 359 GAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYEYN 418
GAI LLM VY+ +F + YLTD+ ++ L VE+FI++V +YE+QIFQKR R + + +
Sbjct: 358 GAIELLMSVYKNKFRSAKKYLTDSSKLNLRNVERFIKAVGMYENQIFQKR-RQSERFRRD 416
Query: 419 EA----------------------MKLNARRESSEELLQAP------VAVADTVKLG--- 447
+A ++L++ E S+ L +P +++ D + +
Sbjct: 417 KARDKARDNARDNAQASRQFSGKLVQLDSLDEVSDSLHSSPSRKYLRLSLDDNIGVANVE 476
Query: 448 ------------EPGYKE---------------RYYADKFEISNPEEIDKVKKDVV---- 476
G++E R D F N E+ DKVK + V
Sbjct: 477 TENSLKAECTKVHSGFQELDNEEDLKFKLKKLLRDKGDGFRSGNGEQ-DKVKLNKVGWRE 535
Query: 477 --------LKYVEGLCWVCR----YYYQDVC-----------SWQWFYPYHYAPFASDLK 513
K VE + + R Y + +C SW WFYPYHYAPFASDLK
Sbjct: 536 RYYEEKFAAKSVEEMEQIRRDVVLKYTEGLCWIMHYYYHGVCSWNWFYPYHYAPFASDLK 595
Query: 514 DLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDM 573
L L+I F LG PF+PF+QL+ LP+AS+ ALPE YR+LMT+P SPI FYP DF+IDM
Sbjct: 596 GLEKLDIKFELGSPFKPFNQLLAVLPSASAHALPECYRSLMTNPDSPIADFYPADFEIDM 655
Query: 574 NGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVHPQHPLYQQIT 633
NGKR++WQG+ KLPF++EK LL ++E LT EE+ RNS + D+L+V HPL + I
Sbjct: 656 NGKRYSWQGISKLPFVEEKRLLEAAAQVEKSLTNEEIRRNSALFDMLFVVASHPLGELIR 715
Query: 634 LYCQLYHQLPPQDR 647
+ L ++R
Sbjct: 716 SLNSRTNNLSNEER 729
>gi|255565761|ref|XP_002523870.1| 5'->3' exoribonuclease, putative [Ricinus communis]
gi|223536958|gb|EEF38596.1| 5'->3' exoribonuclease, putative [Ricinus communis]
Length = 993
Score = 664 bits (1712), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/726 (48%), Positives = 459/726 (63%), Gaps = 103/726 (14%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPAFY+WL ++YP I + PNPNG+EFDNLYLDMNGII
Sbjct: 1 MGVPAFYKWLVNKYPNVI---------------------TSPNPNGLEFDNLYLDMNGII 39
Query: 61 HPCFHPDGKPAP-TSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRR 119
HPCFHPD P+P T++D+VF +I+ YIDHIF +VRPR LLYLAIDGVAPRAKMNQQR+RR
Sbjct: 40 HPCFHPDDHPSPPTTFDEVFNNIYKYIDHIFSIVRPRNLLYLAIDGVAPRAKMNQQRSRR 99
Query: 120 FRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFI 179
FR AKD AEAEEERLRKE+E GK + K+ E DSN+ITPGT+FM LS LQ ++
Sbjct: 100 FRNAKDTEIAEAEEERLRKEYEIQGKQVLPKQYSEVSDSNIITPGTEFMFTLSIKLQEYM 159
Query: 180 QARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIM 239
+ +N P W+ KVILSDA+VPGEGEHKIMS+IR QR LP ++PNTRHCLYGLDADLIM
Sbjct: 160 ISNINSDPAWKAIKVILSDASVPGEGEHKIMSFIRQQRMLPDYNPNTRHCLYGLDADLIM 219
Query: 240 LSLATHEIHFSILREVITLPGQQEKCFVC----------GQVGHLAAECHGKPGDNPADW 289
L+LA+HE+HFSILREV+ L Q C G+ G ++E K + D
Sbjct: 220 LALASHEVHFSILREVVLLQQPQSICLSAHTSLQGRIEFGEFG--SSENKTKRRFSNDDN 277
Query: 290 NGVDDTPIHKKKYQFLNIWVLREYLQYELDIPNPP--FPINFERIVDDFVFLCFFVGNDF 347
D +K YQFL++W+LR+YL+ E+DI +PP F + ERI+DDFVF+CFF GNDF
Sbjct: 278 TLAKDVSFIEKPYQFLHVWILRDYLKLEMDIYDPPENFTFDSERIIDDFVFMCFFAGNDF 337
Query: 348 LPHMPTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVL--------LDRVEKFIQSVAV 399
+P++PTL+I E A++LLM VY++ F +GGYL D +V L RVEKFI +
Sbjct: 338 IPNLPTLQIHERAVDLLMTVYKKNFKKLGGYLVDVHQVNSLKNDYLDLKRVEKFILLIGA 397
Query: 400 YEDQIFQKRTRIQQAY-----EYNEAMK-------------------LNARRESSEELLQ 435
YE+ IF+KR+ +++ ++++A L+A+ + SE+L+
Sbjct: 398 YEEMIFKKRSELRERMLRKLCQHSDAANAKELDGNVEQDMLKISFSSLDAKAQISEDLVS 457
Query: 436 -APVAV----------------------------------ADTVKLGEPGYKERYYADKF 460
+ V++ ADTVKLG G+K+RYY KF
Sbjct: 458 VSAVSISLWFSVLQNTKRFKEELKARLRQKSDLFQNGGFRADTVKLGTTGWKKRYYEQKF 517
Query: 461 EISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDLEI 520
NP +I+ ++K++V KY EGL WV YY+ V SW WFYPYH+APFASD+K ++ ++
Sbjct: 518 SAENPSDIELIRKEMVQKYTEGLLWVLGYYFSAVPSWTWFYPYHHAPFASDMKGMAQVKF 577
Query: 521 TFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAW 580
F G PF+PFDQLMG LP S+ ALP+ YR LM D S I FYP +FQID++GKRF W
Sbjct: 578 KFPKGSPFKPFDQLMGVLPPRSAHALPKSYRQLMIDERSSIIDFYPAEFQIDIDGKRFMW 637
Query: 581 QGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVHPQHPLYQQITLYCQLYH 640
QG+ KLPFIDE+ LL +TKK+E LT +E +N +D L+V ++ Q+ +
Sbjct: 638 QGICKLPFIDEERLLAETKKMEKELTRKEADKNVENVDKLFVRRENFSESQLLQLVSEFA 697
Query: 641 QLPPQD 646
P+D
Sbjct: 698 AGRPKD 703
>gi|189239340|ref|XP_973739.2| PREDICTED: similar to CG10354 CG10354-PA [Tribolium castaneum]
Length = 867
Score = 647 bits (1669), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 347/703 (49%), Positives = 453/703 (64%), Gaps = 30/703 (4%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPAF+RWL+ +YP IV +E+ VD GV P + ++PNPNG+EFDNLYLDMNGII
Sbjct: 1 MGVPAFFRWLSRKYPSVIVHCIEQK-AVDVNGVRVPTNSAEPNPNGVEFDNLYLDMNGII 59
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ +PAP + D++ +IF+ ID IF +VRPRKLLY+AIDGVAPRAKMNQQR+RRF
Sbjct: 60 HPCTHPEDRPAPRNEDEMMVAIFECIDRIFNIVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
Query: 121 RAAKDAAEAEAEEERLRKEFEEAG-KLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFI 179
RAAK+ E E +R+R E G KL K K E DSN ITPGT FMA LS L Y+I
Sbjct: 120 RAAKETVEKINEIKRIRAELLLRGAKLPDEKPKEEHFDSNCITPGTPFMARLSNCLHYYI 179
Query: 180 QARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIM 239
RLN PGWQ KVILSDANVPGEGEHKIM +IR QR P DPNT+HCL G DADLIM
Sbjct: 180 HERLNNDPGWQGIKVILSDANVPGEGEHKIMDFIRRQRAQPDHDPNTQHCLCGADADLIM 239
Query: 240 LSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIHK 299
L LATHE +F+I+RE P + C +CGQ+GH +C G +D V +
Sbjct: 240 LGLATHEPNFTIIREEFK-PNKPRPCDICGQLGHEMKDCIGGAASAESDTQKV----FAE 294
Query: 300 KKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREG 359
Y F+ + VL+EYL+ EL +PN PF FER++DD+VF+CFFVGNDFLPH+P+LEIREG
Sbjct: 295 TDYIFVRLNVLKEYLERELQMPNLPFKYEFERVLDDWVFMCFFVGNDFLPHLPSLEIREG 354
Query: 360 AINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYEYNE 419
AI+ L+ +Y+ GG+LT++G+V L+RV+ + + ED+IF+ R + + ++ E
Sbjct: 355 AIDRLIRLYKDCVYKTGGWLTNSGDVNLERVQLIMSELGKAEDEIFKTRQQKELQFKARE 414
Query: 420 AMKLN----------ARRESSEELLQAPVAVADTVKLGEPGYKERYYADKFEISNPEEID 469
L +R ++ D V+L E G+K+RYY KF++ N + +D
Sbjct: 415 KSMLTPVDSQSSNRGQKRHHEDDDESDDDQAHDEVRLWEDGFKDRYYESKFDV-NSDNLD 473
Query: 470 KVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDLEITFFL-GEPF 528
+ +V L YV GLCWV RYYYQ SW+W+YPYHYAPFASD ++ L F +PF
Sbjct: 474 -FRNNVALHYVRGLCWVLRYYYQGCASWKWYYPYHYAPFASDFVHIAGLSTEFEEDSDPF 532
Query: 529 RPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPF 588
RP +QLMG PAASS +P+ + LM+DP SPI FYP DF+ID+NGK+FAWQGV LPF
Sbjct: 533 RPLEQLMGVFPAASSKHVPQPWAKLMSDPESPIIDFYPEDFKIDLNGKKFAWQGVALLPF 592
Query: 589 IDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVHPQHPLYQQITLYCQLYHQLPPQDRF 648
++E L + L+ EE+ RN D LYV ++ Y QI QLY Q +
Sbjct: 593 VNEDRLFKALAPYYKELSPEEIRRNVRGDDRLYVGAKNAGYNQIK---QLYVQ-----KI 644
Query: 649 AWEIDVNAS-GGMNGYIWLCERN-GLRSIIPSPVKGLPDIERN 689
+ +++V+ S GM G + L + + SP++GL DI N
Sbjct: 645 SVKMEVHVSIEGMQGTVLLSDECVDYGGYLDSPIRGLDDIMNN 687
>gi|426391130|ref|XP_004061937.1| PREDICTED: 5'-3' exoribonuclease 2 [Gorilla gorilla gorilla]
Length = 1099
Score = 645 bits (1664), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 345/720 (47%), Positives = 457/720 (63%), Gaps = 41/720 (5%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPAF+RWL+ +YP IV+ VEE P+ + GV PVD SKPNPN +EFDNLYLDMNGII
Sbjct: 194 MGVPAFFRWLSRKYPSIIVNCVEEKPK-ECNGVKIPVDASKPNPNDVEFDNLYLDMNGII 252
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ KPAP + D++ +IF+YID +F +VRPR+LLY+AIDGVAPRAKMNQQR+RRF
Sbjct: 253 HPCTHPEDKPAPKNEDEMMVAIFEYIDRLFSIVRPRRLLYMAIDGVAPRAKMNQQRSRRF 312
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQ 180
RA+K+ EA E++R+R+E G L +E E DSN ITPGT+FM L+ L+Y+I
Sbjct: 313 RASKEGMEAAVEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIA 372
Query: 181 ARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
RLN PGW+ VILSDA+ PGEGEHKIM YIR QR P DPNT HCL G DADLIML
Sbjct: 373 DRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIML 432
Query: 241 SLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDT-PIHK 299
LATHE +F+I+RE P + + C +C Q GH +C G P + + + D+ P +
Sbjct: 433 GLATHEPNFTIIREEFK-PNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADSLPCAE 491
Query: 300 KKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREG 359
++ FL + VLREYL+ EL + + PF + ER +DD+VF+CFFVGNDFLPH+P+LEIRE
Sbjct: 492 GEFIFLRLNVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREN 551
Query: 360 AINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYEY-- 417
AI+ L+++Y+ GGYLT++G V L RV+ + +V ED IF+KR + ++
Sbjct: 552 AIDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSFRRRQ 611
Query: 418 ---------------------NEAMKLNARRESSEELLQAPVAVADTVKLGEPGYKERYY 456
L + +E+ P D V+L E G+K+RYY
Sbjct: 612 KEKRKRMKSPSISPNTSFTSDGSPSPLGGIKRKAEDSDSEP-EPEDNVRLWEAGWKQRYY 670
Query: 457 ADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLS 516
+KF++ +E K ++ VV YVEGLCWV RYYYQ SW+W+YP+HYAPFASD + ++
Sbjct: 671 KNKFDVDAADE--KFRRKVVQSYVEGLCWVLRYYYQGCASWKWYYPFHYAPFASDFEGIA 728
Query: 517 DLEITFFLG-EPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNG 575
D+ F G +PF+P +QLMG PAAS + LP +R LM+DP S I FYP DF ID+NG
Sbjct: 729 DMPSDFEKGTKPFKPLEQLMGVFPAASGNFLPPSWRKLMSDPDSSIIDFYPEDFAIDLNG 788
Query: 576 KRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVHPQHPLYQQITLY 635
K++AWQGV LPF+DE+ L +++ LT EE RNS+ D+L+V HPL+ I
Sbjct: 789 KKYAWQGVALLPFVDERRLRAALEEVYPDLTPEETRRNSLGGDVLFVGKHHPLHDFILEL 848
Query: 636 CQLYHQLPPQDRFAWEIDV--NASGGMNGYIWLCERNGL-RSIIPSPVKGLPDIERNQAM 692
Q P +DV G+ G L E L I+ SPV L D+ +N +
Sbjct: 849 YQTGSTEP--------VDVPPELCHGIQGKFSLDEEAILPDQIVCSPVPMLRDLTQNTVV 900
>gi|195107132|ref|XP_001998170.1| GI23821 [Drosophila mojavensis]
gi|193914764|gb|EDW13631.1| GI23821 [Drosophila mojavensis]
Length = 793
Score = 644 bits (1662), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 346/734 (47%), Positives = 454/734 (61%), Gaps = 53/734 (7%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGE-GVARPVDVSKPNPNGMEFDNLYLDMNGI 59
MGVPAF+RWL+ +YP I++ E+ + D E G D + PNPNG+EFDNLYLDMNGI
Sbjct: 1 MGVPAFFRWLSKKYPCVIIEC-NENKKTDAETGKTIYEDPTLPNPNGVEFDNLYLDMNGI 59
Query: 60 IHPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRR 119
IHPC HP+ KPAP + +++ +IF+ ID +F +VRPRKLLY+AIDGVAPRAKMNQQR+RR
Sbjct: 60 IHPCTHPEDKPAPKNEEEMMVAIFECIDRLFGIVRPRKLLYMAIDGVAPRAKMNQQRSRR 119
Query: 120 FRAAKDAAEAEAEEERLRKEFEEAG-KLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
FRAAK+ E E ER+R E G KL KEK E DSN ITPGT FM LS L Y+
Sbjct: 120 FRAAKETIEKRIEIERIRNELLTRGCKLPPEKEKGEHFDSNCITPGTPFMDRLSKCLHYY 179
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
I R+N P W+ +VILSDANVPGEGEHKIM YIR QR P DPNT H L G DADLI
Sbjct: 180 IHHRINTNPAWKRIQVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTHHVLCGADADLI 239
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
ML LATHE +F+I+RE LP + C VC Q GH +C G ++ N D PI
Sbjct: 240 MLGLATHEPNFTIIREEF-LPNKPRPCDVCNQFGHEMDKCVGLSAVGSSNCNFTPDIPIG 298
Query: 299 KK-KYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIR 357
+ K+ F+ + VLREYL+ L +PN PF +FER++DD+VF+CFFVGNDFLPH+P+LEIR
Sbjct: 299 AEVKFIFVRLSVLREYLKKTLQMPNLPFSYDFERVLDDWVFMCFFVGNDFLPHLPSLEIR 358
Query: 358 EGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYEY 417
EGA++ L+ +Y++ GYLTD+GEV LDRV+ + + EDQIF+ R R +Q ++
Sbjct: 359 EGAVDRLVELYKKCVYKTKGYLTDSGEVNLDRVQLIMTDLGNVEDQIFKDRQRREQQFKA 418
Query: 418 NE-------------------------------------AMKLNARRESSEELLQAPVAV 440
+ ++++ ++R S+ L
Sbjct: 419 RQKRENNNFKALEQSVFGPSAVGPAAKAQIITNYKQEAASVRMGSKRSSTAASLDDDEEN 478
Query: 441 ADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWF 500
D V+L E G+K RYY KF++S P+ + + + V L+YV GLCWV +YYYQ SW W+
Sbjct: 479 HDEVRLWEDGFKNRYYESKFDVS-PDNL-QFRYAVALQYVRGLCWVLKYYYQGCASWNWY 536
Query: 501 YPYHYAPFASDLKDLSDLEITFFLG-EPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSS 559
+PYHYAPFASD ++ L F G +PF P +QLMG PAASSS +P+ + LM+ P S
Sbjct: 537 FPYHYAPFASDFVNIQGLSTIFEKGTKPFNPLEQLMGVFPAASSSHVPKPWAELMSKPDS 596
Query: 560 PIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDL 619
I FYP DF+ID+NGK+FAWQGV LPF+DE L + L LTEEE+ RN +
Sbjct: 597 TIIDFYPEDFKIDLNGKKFAWQGVALLPFVDENRLFKALIPLHSHLTEEEVKRNKKGENN 656
Query: 620 LYVHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVNASGGMNGYIWLCERN-GLRSIIPS 678
LY+ P Y+ + Q + P ++ GM G I + E N + + S
Sbjct: 657 LYISKFSPHYETVKKLYQKAEKSPNDLSISF-------NGMGGTISISEINTAINGFMKS 709
Query: 679 PVKGLPDIERNQAM 692
P+ GLPDI +N+ +
Sbjct: 710 PIPGLPDIIKNEVI 723
>gi|270010451|gb|EFA06899.1| hypothetical protein TcasGA2_TC009846 [Tribolium castaneum]
Length = 975
Score = 637 bits (1642), Expect = e-180, Method: Compositional matrix adjust.
Identities = 354/752 (47%), Positives = 460/752 (61%), Gaps = 79/752 (10%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPAF+RWL+ +YP IV +E+ VD GV P + ++PNPNG+EFDNLYLDMNGII
Sbjct: 1 MGVPAFFRWLSRKYPSVIVHCIEQK-AVDVNGVRVPTNSAEPNPNGVEFDNLYLDMNGII 59
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ +PAP + D++ +IF+ ID IF +VRPRKLLY+AIDGVAPRAKMNQQR+RRF
Sbjct: 60 HPCTHPEDRPAPRNEDEMMVAIFECIDRIFNIVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
Query: 121 RAAKDAAEAEAEEERLRKEFEEAG-KLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFI 179
RAAK+ E E +R+R E G KL K K E DSN ITPGT FMA LS L Y+I
Sbjct: 120 RAAKETVEKINEIKRIRAELLLRGAKLPDEKPKEEHFDSNCITPGTPFMARLSNCLHYYI 179
Query: 180 QARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIM 239
RLN PGWQ KVILSDANVPGEGEHKIM +IR QR P DPNT+HCL G DADLIM
Sbjct: 180 HERLNNDPGWQGIKVILSDANVPGEGEHKIMDFIRRQRAQPDHDPNTQHCLCGADADLIM 239
Query: 240 LSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIHK 299
L LATHE +F+I+RE P + C +CGQ+GH +C G +D V +
Sbjct: 240 LGLATHEPNFTIIREEFK-PNKPRPCDICGQLGHEMKDCIGGAASAESDTQKV----FAE 294
Query: 300 KKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREG 359
Y F+ + VL+EYL+ EL +PN PF FER++DD+VF+CFFVGNDFLPH+P+LEIREG
Sbjct: 295 TDYIFVRLNVLKEYLERELQMPNLPFKYEFERVLDDWVFMCFFVGNDFLPHLPSLEIREG 354
Query: 360 AINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYEYNE 419
AI+ L+ +Y+ GG+LT++G+V L+RV+ + + ED+IF+ R + + ++ E
Sbjct: 355 AIDRLIRLYKDCVYKTGGWLTNSGDVNLERVQLIMSELGKAEDEIFKTRQQKELQFKARE 414
Query: 420 AMK------------------------LNARRESSE-------------ELLQAPV---- 438
K +NAR E+ E E + PV
Sbjct: 415 KAKRRRSEGYNQYKPNWDLALGQAKPVVNARHEAFEIRKAGMHTQKAGLESMLTPVDSQS 474
Query: 439 ------------------AVADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYV 480
D V+L E G+K+RYY KF++ N + +D + +V L YV
Sbjct: 475 SNRGQKRHHEDDDESDDDQAHDEVRLWEDGFKDRYYESKFDV-NSDNLD-FRNNVALHYV 532
Query: 481 EGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDLEITFFL-GEPFRPFDQLMGTLP 539
GLCWV RYYYQ SW+W+YPYHYAPFASD ++ L F +PFRP +QLMG P
Sbjct: 533 RGLCWVLRYYYQGCASWKWYYPYHYAPFASDFVHIAGLSTEFEEDSDPFRPLEQLMGVFP 592
Query: 540 AASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTK 599
AASS +P+ + LM+DP SPI FYP DF+ID+NGK+FAWQGV LPF++E L +
Sbjct: 593 AASSKHVPQPWAKLMSDPESPIIDFYPEDFKIDLNGKKFAWQGVALLPFVNEDRLFKALA 652
Query: 600 KLEVFLTEEELFRNSVMLDLLYVHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVNAS-G 658
L+ EE+ RN D LYV ++ Y QI QLY Q + + +++V+ S
Sbjct: 653 PYYKELSPEEIRRNVRGDDRLYVGAKNAGYNQIK---QLYVQ-----KISVKMEVHVSIE 704
Query: 659 GMNGYIWLCERN-GLRSIIPSPVKGLPDIERN 689
GM G + L + + SP++GL DI N
Sbjct: 705 GMQGTVLLSDECVDYGGYLDSPIRGLDDIMNN 736
>gi|449482933|ref|XP_004156447.1| PREDICTED: 5'-3' exoribonuclease 4-like, partial [Cucumis sativus]
Length = 685
Score = 636 bits (1640), Expect = e-179, Method: Compositional matrix adjust.
Identities = 306/443 (69%), Positives = 347/443 (78%), Gaps = 34/443 (7%)
Query: 250 SILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIHKKKYQFLNIWV 309
+++ +VI LPGQQEKC+ CG+VGHLAAEC GK D P DWNG D+TPIHKKKYQFLNIWV
Sbjct: 1 TLVVQVIMLPGQQEKCYNCGKVGHLAAECRGK-SDGPEDWNGADETPIHKKKYQFLNIWV 59
Query: 310 LREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHVYR 369
LREYLQYELDIPNPPF INFERIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMH+YR
Sbjct: 60 LREYLQYELDIPNPPFEINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHIYR 119
Query: 370 REFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYEYNEAMKLNARRES 429
+EF A+GGYLTDAGE A E NE M+ ARRE+
Sbjct: 120 KEFPAIGGYLTDAGE-----------------------------AQENNEEMRGRARREN 150
Query: 430 SEELLQAPVAVADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRY 489
V D +KLGEPGYKERYYA+KF +NP I ++K+DVVLKYVEGLCWVCRY
Sbjct: 151 GPPPPPPTV---DKIKLGEPGYKERYYAEKFN-ANPANIAEIKQDVVLKYVEGLCWVCRY 206
Query: 490 YYQDVCSWQWFYPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEK 549
YY VCSWQW+YPYHY+PFASDLK+L+DLEITFF+GEPF+PFDQLMGTLPAASS+ALPEK
Sbjct: 207 YYSGVCSWQWYYPYHYSPFASDLKNLADLEITFFIGEPFKPFDQLMGTLPAASSTALPEK 266
Query: 550 YRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEE 609
YRNLMTDPSSPI +FYP DF+IDMNGKRF WQGV KLPFIDE+ LL QT++LE LT+EE
Sbjct: 267 YRNLMTDPSSPILEFYPSDFEIDMNGKRFQWQGVAKLPFIDERKLLAQTRRLEWSLTDEE 326
Query: 610 LFRNSVMLDLLYVHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVNASGGMNGYIWLCER 669
RNSVMLD+LY H HPL QI Y Q+ QLPP R W ID NASGGMNGY+WLCER
Sbjct: 327 KNRNSVMLDMLYTHCTHPLSAQIFSYYQVASQLPPHARTCWVIDTNASGGMNGYLWLCER 386
Query: 670 NGLRSIIPSPVKGLPDIERNQAM 692
N +R+++ SP+ LPDI+ NQ +
Sbjct: 387 NVIRNVVQSPINSLPDIQCNQVL 409
>gi|195038968|ref|XP_001990842.1| GH18033 [Drosophila grimshawi]
gi|193895038|gb|EDV93904.1| GH18033 [Drosophila grimshawi]
Length = 873
Score = 634 bits (1635), Expect = e-179, Method: Compositional matrix adjust.
Identities = 353/748 (47%), Positives = 455/748 (60%), Gaps = 72/748 (9%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGE-GVARPVDVSKPNPNGMEFDNLYLDMNGI 59
MGVPAF+RWL+ +YP I++ E+ QVD + G D + PNPNG+EFDNLYLDMNGI
Sbjct: 1 MGVPAFFRWLSKKYPCVIIEC-NENKQVDPDTGKNIYEDATLPNPNGVEFDNLYLDMNGI 59
Query: 60 IHPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRR 119
IHPC HP+ KPAP + +++ +IF+ ID +F +VRPRKLLY+AIDGVAPRAKMNQQR+RR
Sbjct: 60 IHPCTHPEDKPAPKNEEEMMIAIFECIDRLFGIVRPRKLLYMAIDGVAPRAKMNQQRSRR 119
Query: 120 FRAAKDAAEAEAEEERLRKEFEEAG-KLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
FRAAK+A E E ER+R E G KL KEK E DSN ITPGT FM LS L Y+
Sbjct: 120 FRAAKEATEKRLEIERIRDELLTRGCKLPPEKEKGEHFDSNCITPGTPFMDRLSKCLHYY 179
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
I RLN P W+ K+ILSDANVPGEGEHKIM YIR QR P DPNT H L G DADLI
Sbjct: 180 IHDRLNNNPAWKGVKIILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTHHVLCGADADLI 239
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
ML LATHE +F+I+RE LP + C VC Q GH +C G + N D PI
Sbjct: 240 MLGLATHEPNFTIIREEF-LPNKPRPCDVCNQFGHEMDKCVGLSAVGSNNINSPPDVPIG 298
Query: 299 KK-KYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIR 357
+ K+ F+ + VLREYL+ L++PN PF +FER +DD+VF+CFFVGNDFLPH+P+LEIR
Sbjct: 299 AEVKFIFVRLSVLREYLRKTLEMPNLPFSYDFERALDDWVFMCFFVGNDFLPHLPSLEIR 358
Query: 358 EGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYEY 417
EGA++ L+ +Y++ YLT++G+V LDRV+ + + EDQIF+ R R +Q Y
Sbjct: 359 EGAVDRLVELYKKCVYKARDYLTNSGDVSLDRVQLIMTDLGNVEDQIFKDRQRREQQY-- 416
Query: 418 NEAMKLNARRESSEELLQA---PVAVA--------------------------------- 441
K +RE+ + L Q+ P+AV
Sbjct: 417 ----KARQKRENHKALEQSAFGPMAVGRNNAAVDKIITNYKQEASAVRMGSNDSQGTKRS 472
Query: 442 ---------------DTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWV 486
D V+L E G+K RYY KF++++ + + V L+YV GLCWV
Sbjct: 473 STNANLDDADEEENNDEVRLWEDGFKNRYYESKFDVASGNL--QFRYAVALQYVRGLCWV 530
Query: 487 CRYYYQDVCSWQWFYPYHYAPFASDLKDLSDLEITFFLG-EPFRPFDQLMGTLPAASSSA 545
+YYYQ SW W++PYHYAPFASD ++ L TF G +PF P +QLMG PAASSS
Sbjct: 531 LKYYYQGCASWNWYFPYHYAPFASDFVNIQGLSTTFEKGTKPFNPLEQLMGVFPAASSSH 590
Query: 546 LPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFL 605
+PE + LM+ P S I FYP DF+ID+NGK+FAWQGV LPF+DE L + L + L
Sbjct: 591 VPEPWAQLMSKPESTIIDFYPEDFKIDLNGKKFAWQGVALLPFVDENRLFKALGPLHIQL 650
Query: 606 TEEELFRNSVMLDLLYVHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVNASGGMNGYIW 665
T+EE+ RN + LY+ P ++ I +LY D + ++ GM G I
Sbjct: 651 TDEEVQRNKRGDNNLYISKCSPHFKTIN---KLYEA---GDNSQLKNSPSSFDGMTGTIS 704
Query: 666 LCERN-GLRSIIPSPVKGLPDIERNQAM 692
E N L + SP+ GLPDI N+ +
Sbjct: 705 KSEINTALNGQLKSPIPGLPDIMNNEVV 732
>gi|195388580|ref|XP_002052957.1| GJ23613 [Drosophila virilis]
gi|194151043|gb|EDW66477.1| GJ23613 [Drosophila virilis]
Length = 774
Score = 634 bits (1634), Expect = e-179, Method: Compositional matrix adjust.
Identities = 353/741 (47%), Positives = 454/741 (61%), Gaps = 61/741 (8%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGE-GVARPVDVSKPNPNGMEFDNLYLDMNGI 59
MGVPAF+RWL+ +YP I++ E+ +VD E G D + PNPNG+EFDNLYLDMNGI
Sbjct: 1 MGVPAFFRWLSKKYPCVIIEC-NENKRVDVETGKTIFEDSTLPNPNGVEFDNLYLDMNGI 59
Query: 60 IHPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRR 119
IHPC HP+ KPAP + +++ +IFD ID +F +VRPRKLLY+AIDGVAPRAKMNQQR+RR
Sbjct: 60 IHPCTHPEDKPAPKNEEEMMVAIFDCIDRLFGIVRPRKLLYMAIDGVAPRAKMNQQRSRR 119
Query: 120 FRAAKDAAEAEAEEERLRKEFEEAG-KLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
FRAAK+ E E ER+R E G KL KEK E DSN ITPGT FM LS L Y+
Sbjct: 120 FRAAKETIEKRLEIERIRNELLTRGCKLPPEKEKGEHFDSNCITPGTPFMDRLSKCLHYY 179
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
I RLN P W+ +VILSDANVPGEGEHKIM YIR QR P +PNT H L G DADLI
Sbjct: 180 IHDRLNNNPAWKGIQVILSDANVPGEGEHKIMDYIRKQRAQPDHNPNTHHVLCGADADLI 239
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVD-DTPI 297
ML LATHE +F+I+RE LP + C +C Q GH +C G ++ N D PI
Sbjct: 240 MLGLATHEPNFTIIREEF-LPNKPRPCDICNQFGHEMDKCVGLGAAGTSNNNHFSPDVPI 298
Query: 298 HKK-KYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEI 356
+ K+ F+ + VLREYL+ L +PN PF +FER++DD+VF+CFFVGNDFLPH+P+LEI
Sbjct: 299 GAEVKFIFVRLSVLREYLKKTLQMPNLPFTYDFERVLDDWVFMCFFVGNDFLPHLPSLEI 358
Query: 357 REGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYE 416
REGAI+ L+ +Y++ GYLTD+GEV LDRV+ + + EDQIF+ R R +Q Y+
Sbjct: 359 REGAIDRLVELYKKCVYKTKGYLTDSGEVNLDRVQLIMTDLGNVEDQIFKDRQRREQQYK 418
Query: 417 YNEAMKLN------------------------------------------ARRESSEELL 434
+ N A+R S+ L
Sbjct: 419 ARQQRDNNNSKALEESVFGPAPVGPDNNKIQTITNYKQAASSVRMASNGAAKRSSTTANL 478
Query: 435 QAPVAVADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDV 494
D V+L E G+K RYY KF++ P + + + V L+YV GLCWV +YYYQ
Sbjct: 479 DDDDENNDEVRLWEEGFKNRYYESKFDV--PPDNLQFRYAVALQYVRGLCWVLKYYYQGC 536
Query: 495 CSWQWFYPYHYAPFASDLKDLSDLEITFFLG-EPFRPFDQLMGTLPAASSSALPEKYRNL 553
SW W++PYHYAPFASD ++ L F G +PF P +QLMG PAASSS +PE + L
Sbjct: 537 ASWNWYFPYHYAPFASDFVNIQGLSTIFEKGTKPFNPLEQLMGVFPAASSSHVPEPWAQL 596
Query: 554 MTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRN 613
M+ P S I FYP DF+ID+NGK+FAWQGV LPF+DE L + L LT+EE+ RN
Sbjct: 597 MSRPDSTIIDFYPDDFKIDLNGKKFAWQGVALLPFVDENRLFKALIPLHSHLTDEEVKRN 656
Query: 614 SVMLDLLYVHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVNAS-GGMNGYIWLCERN-G 671
+ LYV P ++ + +LY Q + ++D S GM G I + + N
Sbjct: 657 KRGENNLYVSKFSPHFKTVQ---KLY-----QPAYKSQLDCPISFNGMCGTISISDLNTA 708
Query: 672 LRSIIPSPVKGLPDIERNQAM 692
L + SP+ GLPDI +N+ +
Sbjct: 709 LNDQLKSPIPGLPDIIKNEVV 729
>gi|198471914|ref|XP_001355769.2| GA10268 [Drosophila pseudoobscura pseudoobscura]
gi|198139522|gb|EAL32828.2| GA10268 [Drosophila pseudoobscura pseudoobscura]
Length = 916
Score = 632 bits (1630), Expect = e-178, Method: Compositional matrix adjust.
Identities = 342/732 (46%), Positives = 445/732 (60%), Gaps = 54/732 (7%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGE-GVARPVDVSKPNPNGMEFDNLYLDMNGI 59
MGVPAF+RWL+ +Y I+D E+ QVD + G D + PNPNG+EFDNLYLDMNGI
Sbjct: 1 MGVPAFFRWLSRKYASVIIDC-NENKQVDPDTGKNIYEDATLPNPNGVEFDNLYLDMNGI 59
Query: 60 IHPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRR 119
IHPC HP+ KPAP + D++ +IFD ID +F +VRPRK+LY+AIDGVAPRAKMNQQR+RR
Sbjct: 60 IHPCTHPEDKPAPKNEDEMMVAIFDCIDRLFGIVRPRKVLYMAIDGVAPRAKMNQQRSRR 119
Query: 120 FRAAKDAAEAEAEEERLRKEFEEAG-KLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
FRAAK+ E E R+R+E G KL KEK E DSN ITPGT FM LS L Y+
Sbjct: 120 FRAAKETTEKRMEIARIREELLTRGCKLPPEKEKGEHFDSNCITPGTPFMDRLSKCLHYY 179
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
+ R N P W+ KVILSDANVPGEGEHKIM YIR QR P DPNT+H L G DADLI
Sbjct: 180 VHDRQNNNPAWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHVLCGADADLI 239
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
ML LATHE +F+I+RE LP + C +C Q GH +C G + N D I
Sbjct: 240 MLGLATHEPNFTIIREEF-LPNKPRPCDICNQFGHEMDKCVGLSAVGSSGANFKPDVAIG 298
Query: 299 KK-KYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIR 357
+ K+ F+ + VLREYL+ L++PN PF +FER +DD+VF+CFFVGNDFLPH+P+LEIR
Sbjct: 299 AEVKFIFVRLSVLREYLKQTLEMPNLPFEYDFERTLDDWVFMCFFVGNDFLPHLPSLEIR 358
Query: 358 EGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYEY 417
EGA++ L+ +Y++ GYLTD+G+V LDRV+ + + EDQIF+ R R +Q ++
Sbjct: 359 EGAVDRLVELYKKCVYKTKGYLTDSGDVNLDRVQLIMTDLGNAEDQIFKSRQRREQQFKA 418
Query: 418 NEAMKLNARRESSEELLQAPVAVA------------------------------------ 441
E + + ++ + P AV
Sbjct: 419 REKQRQRQDHSALDQSVFGPTAVGGGRNGQPSSIANYKQEAAALRTGQKRPNEDTKDEEE 478
Query: 442 --DTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQW 499
D V+L E G+K RYY KF+++ E + V L+YV GLCWV +YYYQ SW W
Sbjct: 479 DNDEVRLWEDGFKSRYYESKFDVA--PENHSFRYAVALQYVRGLCWVLKYYYQGCASWNW 536
Query: 500 FYPYHYAPFASDLKDLSDLEITFFLG-EPFRPFDQLMGTLPAASSSALPEKYRNLMTDPS 558
++PYHYAPFASD ++ L F G +PF P +QLMG PAASSS +PE + LM+ P
Sbjct: 537 YFPYHYAPFASDFVNIQGLSTAFEKGTKPFNPLEQLMGVFPAASSSHVPEPWAELMSSPD 596
Query: 559 SPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLD 618
SPI FYP DF+ID+NGK+FAWQGV LPF+DEK L + LT E+ RN +
Sbjct: 597 SPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEKRLFKALVPYYTQLTGAEVKRNKQGHN 656
Query: 619 LLYVHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVNASGGMNGYIWLCE-RNGLRSIIP 677
LY+ P Y+++ ++ +D + + + GM G I + + +P
Sbjct: 657 FLYISNSSPHYKKVK---KITESTDTED----QCNAISFNGMRGTILRSDIDTAIDGCLP 709
Query: 678 SPVKGLPDIERN 689
SP+ GLPDI N
Sbjct: 710 SPIAGLPDITGN 721
>gi|194760286|ref|XP_001962372.1| GF15434 [Drosophila ananassae]
gi|190616069|gb|EDV31593.1| GF15434 [Drosophila ananassae]
Length = 911
Score = 631 bits (1627), Expect = e-178, Method: Compositional matrix adjust.
Identities = 346/743 (46%), Positives = 451/743 (60%), Gaps = 66/743 (8%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPV--DVSKPNPNGMEFDNLYLDMNG 58
MGVPAF+RWL+ +YP I++ E+ QVD + R + D + PNPNG+EFDNLYLDMNG
Sbjct: 1 MGVPAFFRWLSRKYPSVIIEC-NENKQVDPD-TGRNIYEDATLPNPNGVEFDNLYLDMNG 58
Query: 59 IIHPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
IIHPC HP+ KPAP + D++ +IFD ID +F +VRPRKLLY+AIDGVAPRAKMNQQR+R
Sbjct: 59 IIHPCTHPEDKPAPKNEDEMMVAIFDCIDRLFGIVRPRKLLYMAIDGVAPRAKMNQQRSR 118
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAG-KLLSAKEKPETCDSNVITPGTQFMAVLSAALQY 177
RFRAAK+ E E RLR+E G KL KEK E DSN ITPGT FM LS L Y
Sbjct: 119 RFRAAKETTEKRLEIARLREELMSRGCKLPPEKEKGEHFDSNCITPGTPFMDRLSKCLHY 178
Query: 178 FIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADL 237
++ RLN P W+ KVILSDANVPGEGEHKIM YIR QR P DPNT+H L G DADL
Sbjct: 179 YVHDRLNNNPAWKGVKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHVLCGADADL 238
Query: 238 IMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPI 297
IML LATHE +F+I+RE LP + C +C Q GH +C+G A++ D PI
Sbjct: 239 IMLGLATHEPNFTIIREEF-LPNKPRPCDICNQFGHEMEKCNGLGATTGANFK--PDVPI 295
Query: 298 HKK-KYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEI 356
+ K+ F+ + VLREYL+ L +PN PF +FER +DD+VF+CFFVGNDFLPH+P+LEI
Sbjct: 296 GAEVKFIFVRLSVLREYLKQTLVMPNLPFEYSFERALDDWVFMCFFVGNDFLPHLPSLEI 355
Query: 357 REGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYE 416
REGA++ L+ +Y++ GYLTD+G+V LDRV+ + + EDQIF+ R R +Q ++
Sbjct: 356 REGAVDRLVELYKKCVYKTRGYLTDSGDVNLDRVQLIMTDLGNAEDQIFKNRQRREQQFK 415
Query: 417 YNEAMKLNARRESSEELLQAPVAVADTVKLG----------------------------- 447
+ + R L V A+ V G
Sbjct: 416 ARDKARRRQERNQDHRSLDQSVFGANAVGAGNQPGNIGNYKEAAAALRLGKRSGAQAGLE 475
Query: 448 ----------------EPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYY 491
E G+K+RYY KF+++ P + + + V L+YV GLCWV +YYY
Sbjct: 476 DDEEEEEEDNDEVRLWEDGFKDRYYESKFDVA-PGNL-QFRYAVALQYVRGLCWVLKYYY 533
Query: 492 QDVCSWQWFYPYHYAPFASDLKDLSDLEITFFLG-EPFRPFDQLMGTLPAASSSALPEKY 550
Q SW W++PYHYAPFASD ++ L F G +PF P +QLMG PAASSS +PE +
Sbjct: 534 QGCASWNWYFPYHYAPFASDFVNIQGLSTIFEKGTKPFNPLEQLMGVFPAASSSHVPEPW 593
Query: 551 RNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEEL 610
+LM++P SPI FYP DF+ID+NGK+FAWQGV LPF+DEK L + LT EE+
Sbjct: 594 ADLMSNPDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEKRLFKALVPYYDQLTSEEV 653
Query: 611 FRNSVMLDLLYVHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVNASGGMNGYIWLCERN 670
RN + LY+ P ++++ + E + + GM G + E N
Sbjct: 654 KRNKRGDNYLYITNSSPHFKKVKRITEKSDDD--------ECNAISFSGMRGTLAKSELN 705
Query: 671 -GLRSIIPSPVKGLPDIERNQAM 692
+ + SP+ GLPDI NQ +
Sbjct: 706 TAISGCLRSPISGLPDITDNQII 728
>gi|194862714|ref|XP_001970086.1| GG10442 [Drosophila erecta]
gi|190661953|gb|EDV59145.1| GG10442 [Drosophila erecta]
Length = 902
Score = 630 bits (1625), Expect = e-178, Method: Compositional matrix adjust.
Identities = 348/737 (47%), Positives = 451/737 (61%), Gaps = 61/737 (8%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPV--DVSKPNPNGMEFDNLYLDMNG 58
MGVPAF+RWL+ +YP I++ E+ QVD + R + D + PNPNG+EFDNLYLDMNG
Sbjct: 1 MGVPAFFRWLSRKYPSVIIEC-NENKQVDTD-TGRNIYEDATLPNPNGIEFDNLYLDMNG 58
Query: 59 IIHPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
IIHPC HP+ KPAP + D++ +IFD ID +F +VRPRKLLY+AIDGVAPRAKMNQQR+R
Sbjct: 59 IIHPCTHPEDKPAPKNEDEMMVAIFDCIDRLFGIVRPRKLLYMAIDGVAPRAKMNQQRSR 118
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAG-KLLSAKEKPETCDSNVITPGTQFMAVLSAALQY 177
RFRAAK+ E E R+R+E G KL KEK E DSN ITPGT FM LS L Y
Sbjct: 119 RFRAAKETTEKRLEIARIREELLSRGCKLPPEKEKGEHFDSNCITPGTPFMDRLSKCLHY 178
Query: 178 FIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADL 237
F+ RLN P W+ KVILSDANVPGEGEHKIM +IR QR P DPNT+H L G DADL
Sbjct: 179 FVHDRLNNNPAWKGIKVILSDANVPGEGEHKIMDFIRKQRAQPDHDPNTQHVLCGADADL 238
Query: 238 IMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPI 297
IML LATHE +F+I+RE LP + C +C GH +C G P N D PI
Sbjct: 239 IMLGLATHEPNFTIIREEF-LPNKPRPCDICNGFGHEMDKCVGLGATAPTGANFKPDVPI 297
Query: 298 HKK-KYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEI 356
+ K+ F+ + VLREYL+ L++PN PF +FER +DD+VF+CFFVGNDFLPH+P+LEI
Sbjct: 298 GAEVKFIFVRLSVLREYLKQTLEMPNLPFEYSFERALDDWVFMCFFVGNDFLPHLPSLEI 357
Query: 357 REGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYE 416
REGA++ L+ +Y++ GYLTD+G+V LDRV+ + + EDQIF+ R R ++ ++
Sbjct: 358 REGAVDRLVELYKKCVYKTKGYLTDSGDVNLDRVQLIMTDLGNAEDQIFKSRQRREEQFK 417
Query: 417 -YNEAMKLNARRESSEELLQAPVAVA---------------------------------- 441
++A K R + L Q+ +
Sbjct: 418 ARDKARKRQERNQDHGSLNQSAFGASAVGPNSQQRSVGNYKEEAAALRNRKRTIDQANLD 477
Query: 442 -------DTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDV 494
D V+L E G+K+RYY KF++++ + + + V L+YV GLCWV +YYYQ
Sbjct: 478 EDEEEDNDEVRLWEDGFKDRYYESKFDVASGNQ--QFRYAVALQYVRGLCWVLKYYYQGC 535
Query: 495 CSWQWFYPYHYAPFASDLKDLSDLEITFFLG-EPFRPFDQLMGTLPAASSSALPEKYRNL 553
SW W++PYHYAPFASD ++ L F G +PF P +QLMG PAASSS +PE + L
Sbjct: 536 ASWNWYFPYHYAPFASDFVNIQGLSTMFEKGTKPFNPLEQLMGVFPAASSSHVPEPWAKL 595
Query: 554 MTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRN 613
M+DP SPI FYP DF+ID+NGK+FAWQGV LPF+DEK L + LT EE+ RN
Sbjct: 596 MSDPESPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEKRLFKALVPYYDQLTGEEVKRN 655
Query: 614 SVMLDLLYVHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVNASGGMNGYIWLCERN-GL 672
+ LY+ Q P Y+++ + A D GM G + E N +
Sbjct: 656 KRGDNYLYISNQSPHYKKVKKVSSKDDDSVCK---AISFD-----GMRGTLGKTELNTAI 707
Query: 673 RSIIPSPVKGLPDIERN 689
I+ SP+ GL DI N
Sbjct: 708 SGILRSPISGLSDINDN 724
>gi|20129299|ref|NP_609082.1| Rat1, isoform A [Drosophila melanogaster]
gi|442626452|ref|NP_001260166.1| Rat1, isoform B [Drosophila melanogaster]
gi|74869864|sp|Q9VM71.2|XRN2_DROME RecName: Full=5'-3' exoribonuclease 2 homolog; AltName:
Full=Ribonucleic acid-trafficking protein 1; Short=dRAT1
gi|10728625|gb|AAF52452.2| Rat1, isoform A [Drosophila melanogaster]
gi|219990665|gb|ACL68706.1| FI04660p [Drosophila melanogaster]
gi|440213467|gb|AGB92702.1| Rat1, isoform B [Drosophila melanogaster]
Length = 908
Score = 628 bits (1620), Expect = e-177, Method: Compositional matrix adjust.
Identities = 346/738 (46%), Positives = 451/738 (61%), Gaps = 62/738 (8%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPV--DVSKPNPNGMEFDNLYLDMNG 58
MGVPAF+RWL+ +YP I++ E+ QVD + R + D + PNPNG+EFDNLYLDMNG
Sbjct: 1 MGVPAFFRWLSRKYPSVIIEC-NENKQVDAD-TGRNIYEDPTLPNPNGIEFDNLYLDMNG 58
Query: 59 IIHPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
IIHPC HP+ KPAP + D++ +IF+ ID +F +VRPRKLLY+AIDGVAPRAKMNQQR+R
Sbjct: 59 IIHPCTHPEDKPAPKNEDEMMVAIFECIDRLFGIVRPRKLLYMAIDGVAPRAKMNQQRSR 118
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAG-KLLSAKEKPETCDSNVITPGTQFMAVLSAALQY 177
RFRAAK+ E E R+R+E G KL KEK E DSN ITPGT FM LS L Y
Sbjct: 119 RFRAAKETTEKRLEIARIREELLSRGCKLPPEKEKGEHFDSNCITPGTPFMDRLSKCLHY 178
Query: 178 FIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADL 237
F+ R N P W+ KVILSDANVPGEGEHKIM YIR QR P DPNT+H L G DADL
Sbjct: 179 FVHDRQNNNPAWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHVLCGADADL 238
Query: 238 IMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPI 297
IML LATHE +F+I+RE LP + C +C GH +C G P N D PI
Sbjct: 239 IMLGLATHEPNFTIIREEF-LPNKPRPCDICNGFGHEMDKCVGLGATAPTSANFKPDVPI 297
Query: 298 HKK-KYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEI 356
+ K+ F+ + VLREYL+ L++PN PF +FER +DD+VF+CFFVGNDFLPH+P+LEI
Sbjct: 298 GAEVKFIFVRLSVLREYLKQTLEMPNLPFEYSFERALDDWVFMCFFVGNDFLPHLPSLEI 357
Query: 357 REGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYE 416
REGA++ L+ +Y++ GYLTD+G+V LDRV+ + + EDQIF+ R R ++ ++
Sbjct: 358 REGAVDRLVELYKKCVYKTRGYLTDSGDVNLDRVQLIMTDLGNAEDQIFKSRQRREEQFK 417
Query: 417 -YNEAMKLNARRESSEELLQAPVAVA---------------------------------- 441
++A K R + L Q+ +
Sbjct: 418 ARDKARKRQERNQDHGSLNQSAFGASAVGPNSQQRSVGNYKEEAAALRNRKRTSDMANLD 477
Query: 442 --------DTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQD 493
D V+L E G+K+RYY KF+++ + + + V L+YV GLCWV +YYYQ
Sbjct: 478 DEDEEENNDEVRLWEDGFKDRYYESKFDVAPGNQ--QFRYAVALQYVRGLCWVLKYYYQG 535
Query: 494 VCSWQWFYPYHYAPFASDLKDLSDLEITFFLG-EPFRPFDQLMGTLPAASSSALPEKYRN 552
SW W++PYHYAPFASD ++ L F G +PF P +QLMG PAASSS +PE +
Sbjct: 536 CASWNWYFPYHYAPFASDFVNIQGLSTMFEKGTKPFNPLEQLMGVFPAASSSHVPEPWAK 595
Query: 553 LMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFR 612
LM+DP SPI FYP DF+ID+NGK+FAWQGV LPF+DEK L + LT EE+ R
Sbjct: 596 LMSDPESPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEKRLFKALVPYYDQLTGEEVKR 655
Query: 613 NSVMLDLLYVHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVNASGGMNGYIWLCERN-G 671
N + LY+ Q P Y+++ + + + A D GM G + E N
Sbjct: 656 NKRGDNYLYISNQSPHYKKVKKISEKDDESVCK---AISFD-----GMRGTLGKTELNTA 707
Query: 672 LRSIIPSPVKGLPDIERN 689
+ ++ SP+ GL DI N
Sbjct: 708 ISGVLKSPISGLSDINDN 725
>gi|195471641|ref|XP_002088111.1| GE14198 [Drosophila yakuba]
gi|194174212|gb|EDW87823.1| GE14198 [Drosophila yakuba]
Length = 897
Score = 628 bits (1620), Expect = e-177, Method: Compositional matrix adjust.
Identities = 345/737 (46%), Positives = 449/737 (60%), Gaps = 61/737 (8%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPV--DVSKPNPNGMEFDNLYLDMNG 58
MGVPAF+RWL+ +YP I++ E+ +VD + R + D + PNPNG+EFDNLYLDMNG
Sbjct: 1 MGVPAFFRWLSRKYPSVIIEC-NENKKVDPD-TGRNIYEDATLPNPNGIEFDNLYLDMNG 58
Query: 59 IIHPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
IIHPC HP+ KPAP + D++ +IFD ID +F +VRPRKLLY+AIDGVAPRAKMNQQR+R
Sbjct: 59 IIHPCTHPEDKPAPKNEDEMMVAIFDCIDRLFGIVRPRKLLYMAIDGVAPRAKMNQQRSR 118
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAG-KLLSAKEKPETCDSNVITPGTQFMAVLSAALQY 177
RFRAAK+ E E R+R+E G KL KEK E DSN ITPGT FM LS L Y
Sbjct: 119 RFRAAKETTEKRLEIARIREELMSRGCKLPPEKEKGEHFDSNCITPGTPFMDRLSKCLHY 178
Query: 178 FIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADL 237
F+ RLN P W+ KVILSDANVPGEGEHKIM YIR QR P DPNT+H L G DADL
Sbjct: 179 FVHDRLNNNPAWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHVLCGADADL 238
Query: 238 IMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPI 297
IML LATHE +F+I+RE LP + C +C GH +C G P + D PI
Sbjct: 239 IMLGLATHEPNFTIIREEF-LPNKPRPCDICNGFGHEMDKCVGLGATAPTSASFKPDVPI 297
Query: 298 HKK-KYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEI 356
+ K+ F+ + VLREYL+ L++PN PF +FER +DD+VF+CFFVGNDFLPH+P+LEI
Sbjct: 298 GAEVKFIFVRLSVLREYLKQTLEMPNLPFEYSFERALDDWVFMCFFVGNDFLPHLPSLEI 357
Query: 357 REGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYE 416
REGA++ L+ +Y++ GYLT +G+V LDRV+ + + EDQIF+ R R ++ ++
Sbjct: 358 REGAVDRLVELYKKCVYKTKGYLTTSGDVNLDRVQLIMTDLGNAEDQIFKSRQRREEQFK 417
Query: 417 YN----------------------------------------EAMKLNARRESSEE--LL 434
EA L R+ + ++ L
Sbjct: 418 TRDKCRKRQERNQDHGSLNQSSFGASAVGPNSQQKSVGNYKEEAAALRNRKRTGDQANLD 477
Query: 435 QAPVAVADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDV 494
D V+L E G+K+RYY KF+++ + + + V L+YV GLCWV +YYYQ
Sbjct: 478 DDDEEDNDEVRLWEDGFKDRYYESKFDVAPGNQ--QFRYAVALQYVRGLCWVLKYYYQGC 535
Query: 495 CSWQWFYPYHYAPFASDLKDLSDLEITFFLG-EPFRPFDQLMGTLPAASSSALPEKYRNL 553
SW W++PYHYAPFASD ++ L F G +PF P +QLMG PAASSS +PE + L
Sbjct: 536 SSWNWYFPYHYAPFASDFVNIQGLSTAFEKGTKPFNPLEQLMGVFPAASSSHVPEPWAKL 595
Query: 554 MTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRN 613
M+DP SPI FYP DF+ID+NGK+FAWQGV LPF+DEK L + LT EE+ RN
Sbjct: 596 MSDPESPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEKRLFKALVPYYDQLTGEEVTRN 655
Query: 614 SVMLDLLYVHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVNASGGMNGYIWLCERN-GL 672
+ LY+ Q P Y+++ Q + I + GM G + + N +
Sbjct: 656 KRGDNYLYITNQSPHYKKVKKVSQ-----KDDENVCKAISFD---GMRGTLGQTKLNTAI 707
Query: 673 RSIIPSPVKGLPDIERN 689
I+ SP+ GL DI N
Sbjct: 708 SGILKSPISGLSDIHDN 724
>gi|170058238|ref|XP_001864833.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167877413|gb|EDS40796.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 884
Score = 627 bits (1617), Expect = e-177, Method: Compositional matrix adjust.
Identities = 345/742 (46%), Positives = 451/742 (60%), Gaps = 64/742 (8%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPAF+RWL+ +YP IV+ VE+ D +G D++KPNPN +EFDNLYLDMNGII
Sbjct: 1 MGVPAFFRWLSRKYPSVIVECVEQK-NTDDDGNVLYDDMTKPNPNKVEFDNLYLDMNGII 59
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ KPAP + D++ +IF+ ID + +VRPR++LY+AIDGVAPRAKMNQQR+RRF
Sbjct: 60 HPCTHPEDKPAPRNEDEMMVAIFECIDRLMNIVRPRQVLYMAIDGVAPRAKMNQQRSRRF 119
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLL-SAKEKPETCDSNVITPGTQFMAVLSAALQYFI 179
RA+K+AAE E ++R+E G +L KEK DSN ITPGT FM LS LQY++
Sbjct: 120 RASKEAAEKATEIAKIREELAAKGCILPPEKEKGAHFDSNCITPGTPFMDRLSKCLQYYV 179
Query: 180 QARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIM 239
R+N PGW+ KVILSDANVPGEGEHKIM YIR QR P DPNT H L G DADLIM
Sbjct: 180 HDRMNNNPGWKGLKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTHHVLCGADADLIM 239
Query: 240 LSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIHK 299
L LATHE HF+I+RE LP ++ C +C Q+GH +C G + D P +
Sbjct: 240 LGLATHETHFTIIREEF-LPNKERPCDICQQMGHEMKDCAGL--KSARDCERSPPPPGKE 296
Query: 300 KKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREG 359
++ F+ + VL+EYL ELD+PN PF +FER++DD+VF+CFFVGNDFLPH+P+LEIRE
Sbjct: 297 TQFIFVRLNVLKEYLAKELDMPNLPFTYDFERVIDDWVFMCFFVGNDFLPHLPSLEIREN 356
Query: 360 AINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAY-EYN 418
AI+ L+ +Y++ GYLTD+G+V LDRVE + + ED+IF+ R + + E N
Sbjct: 357 AIDRLVTLYKKCVYKTKGYLTDSGDVTLDRVELIMTDLGYAEDEIFRNRKVTEDRFKERN 416
Query: 419 EAMKLNARRESSEEL---------------LQAPVAVA---------------------- 441
+ MK+ RE + Q P A+
Sbjct: 417 KRMKMQKEREQRPKFDQMHNSQFAPTPLGRGQTPQAIVNPRQEAANFRMGGNNRNQQDSN 476
Query: 442 ---------DTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQ 492
D V+L E G+K+RYY KF++ P + K ++ V +YV GLCWV +YYYQ
Sbjct: 477 QDNQQPETPDEVRLWEDGFKDRYYESKFDVL-PTNM-KFRQTVAWEYVRGLCWVLKYYYQ 534
Query: 493 DVCSWQWFYPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRN 552
SW+W++PYHYAPFASD + L ++ F G PF+P QLMG PAAS S +P +
Sbjct: 535 GCASWEWYFPYHYAPFASDFRTLQNVNKHFDRGTPFKPLQQLMGVFPAASRSHVPPAFAE 594
Query: 553 LMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFR 612
LM DP SPI FYP DF ID+NGK+FAWQGV LPF+DEK L + T LT+EE R
Sbjct: 595 LMVDPKSPIIDFYPIDFHIDLNGKKFAWQGVALLPFVDEKRLFKATDPKVPELTQEERLR 654
Query: 613 NSVMLDLLYVHPQHPLYQQI-TLYCQLYHQLPPQDRFAWEIDVNASGGMNGYIWLCERNG 671
N L LY+ Y+ LY + + E+ V A G M G I N
Sbjct: 655 NENGLARLYLCSGSEAYRTARALYAN-------EVDYEREVPVLA-GCMRGLIIPTLENI 706
Query: 672 LR-SIIPSPVKGLPDIERNQAM 692
+ ++PSP+ GL + N+ +
Sbjct: 707 QQDGVLPSPIPGLHPVCENKVL 728
>gi|195438180|ref|XP_002067015.1| GK24252 [Drosophila willistoni]
gi|194163100|gb|EDW78001.1| GK24252 [Drosophila willistoni]
Length = 924
Score = 627 bits (1617), Expect = e-177, Method: Compositional matrix adjust.
Identities = 350/749 (46%), Positives = 460/749 (61%), Gaps = 66/749 (8%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGE-GVARPVDVSKPNPNGMEFDNLYLDMNGI 59
MGVPAF+RWL+ +YP I++ E+ ++D E G D + PNPNG+EFDNLYLDMNGI
Sbjct: 1 MGVPAFFRWLSRKYPSVIIEC-NENKKLDPETGKNTYEDSTLPNPNGLEFDNLYLDMNGI 59
Query: 60 IHPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRR 119
IHPC HP+ KPAP + D++ +IF+ ID +F +VRPRK+LY+AIDGVAPRAKMNQQR+RR
Sbjct: 60 IHPCTHPEDKPAPKNEDEMMVAIFECIDRLFGIVRPRKVLYMAIDGVAPRAKMNQQRSRR 119
Query: 120 FRAAKDAAEAEAEEERLRKEFEEAG-KLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
FRAAK+ E AE ER+R+E G KL KEK E DSN ITPGT FM LS L Y+
Sbjct: 120 FRAAKETIEKRAEIERIREELMTKGCKLPPEKEKGEHFDSNCITPGTPFMDRLSKCLHYY 179
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
+ RLN P W+ KVILSDANVPGEGEHKIM YIR QR P DPNT+H L G DADLI
Sbjct: 180 VHDRLNNNPAWKGVKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHVLCGADADLI 239
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPG-DNPADWNGVDDTPI 297
ML LATHE +F+I+RE LP + C VC Q GH +C G + + N D PI
Sbjct: 240 MLGLATHEPNFTIIREEF-LPNKPRPCDVCNQFGHEMDKCMGLNAIGSTSAANFKPDVPI 298
Query: 298 HKK-KYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEI 356
+ K+ F+ + VLREYL+ L++PN PF +FER +DD+VF+CFFVGNDFLPH+P+LEI
Sbjct: 299 GAEVKFIFVRLSVLREYLKKTLEMPNLPFAYDFERALDDWVFMCFFVGNDFLPHLPSLEI 358
Query: 357 REGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYE 416
REGA++ L+ +Y++ GYLTD+G+V LDRV+ + + EDQIF+ R R ++ +
Sbjct: 359 REGAVDRLVELYKKCVYKTQGYLTDSGDVNLDRVQLIMTDLGNAEDQIFKDRQRREKQFR 418
Query: 417 YNE-------------------------------------------AMKLNARRESSEEL 433
E A++L +R ++
Sbjct: 419 DREKKKKQWERNDMKSLEQSVFGPQAVGAGKGDGPTNIQNYKAEAAALRLGQKRSGADAG 478
Query: 434 LQA---PVAVADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYY 490
LQA D V+L E G+K RYY KF++ P+ + + + V L+YV GLCWV +YY
Sbjct: 479 LQAEEEDEDCNDEVRLWEDGFKNRYYESKFDVG-PDNL-QFRYAVALQYVRGLCWVLKYY 536
Query: 491 YQDVCSWQWFYPYHYAPFASDLKDLSDLEITFFLG-EPFRPFDQLMGTLPAASSSALPEK 549
YQ SW W++PYHYAPFASD ++ L F G +PF P +QLMG PAASSS +P+
Sbjct: 537 YQGCSSWNWYFPYHYAPFASDFVNIQGLSTLFEKGTKPFNPLEQLMGVFPAASSSHVPQP 596
Query: 550 YRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEE 609
+ LM+ P+SPI FYP DF+ID+NGK+FAWQGV LPF+DEK L + LT EE
Sbjct: 597 WVELMSSPTSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEKRLFKALVPFYEQLTSEE 656
Query: 610 LFRNSVMLDLLYVHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVNAS-----GGMNGYI 664
+ RN + LY+ + P ++ + ++Y Q +D + D GM G I
Sbjct: 657 VKRNKRGNNYLYISKESPHFK---VANKIYRQ--KKDDEVAQFDEEEGYPISLDGMRGTI 711
Query: 665 WLCE-RNGLRSIIPSPVKGLPDIERNQAM 692
E + +I+ SP+ LPDI NQ +
Sbjct: 712 NRTELSTAINAILQSPIGDLPDITDNQIL 740
>gi|321474178|gb|EFX85144.1| hypothetical protein DAPPUDRAFT_194028 [Daphnia pulex]
Length = 827
Score = 624 bits (1609), Expect = e-176, Method: Compositional matrix adjust.
Identities = 338/747 (45%), Positives = 452/747 (60%), Gaps = 66/747 (8%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPAF+RWL +YP I D +EE + +G A PVDVSKPNPNG+EFDNLYLDMNGII
Sbjct: 1 MGVPAFFRWLTVKYPSVICDCIEEKVRHGPDGKALPVDVSKPNPNGVEFDNLYLDMNGII 60
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ +PAP + D++ +IF+ ID +F +VRPRKLLY+AIDGVAPRAKMNQQR+RRF
Sbjct: 61 HPCTHPEDRPAPRNEDEMMVAIFECIDRMFAIVRPRKLLYMAIDGVAPRAKMNQQRSRRF 120
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLL-SAKEKPETCDSNVITPGTQFMAVLSAALQYFI 179
RA+K+ AE +R+ G + S K K E DSN ITPGT FM LSA L Y++
Sbjct: 121 RASKEIAEKVMTIATVRESLMARGAYVPSEKSKGEHFDSNCITPGTPFMHRLSACLHYYV 180
Query: 180 QARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIM 239
RL PGW+ VILSDANVPGEGEHKIM YIR QR P DPNTRH L G DADLIM
Sbjct: 181 HDRLRNDPGWKNVSVILSDANVPGEGEHKIMDYIRRQRAQPSHDPNTRHVLCGADADLIM 240
Query: 240 LSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIHK 299
L LATHE +F+I+RE P + C +C Q+GH +C G + + + +
Sbjct: 241 LGLATHEPNFTIIREEFK-PNKPRPCEICNQIGHDLNDCQGAERTKYGENDEIGPNIAAE 299
Query: 300 KKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREG 359
+ Y F+ ++VLREYL+ EL +PN PF + ER +DD+VF+CFFVGNDFLPH+P+LEIREG
Sbjct: 300 QNYIFVRLYVLREYLERELRMPNLPFEYDLERAIDDWVFMCFFVGNDFLPHLPSLEIREG 359
Query: 360 AINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYEYNE 419
AI+ L+++Y+ G++TD+G V L+RV+ + + ED+IF+KR + + +
Sbjct: 360 AIDRLVNLYKDCVYKTKGWVTDSGFVNLERVQIILSQLGHAEDEIFRKRQ--EDELSFRK 417
Query: 420 AMKLNARR--------------------------------ESSEELLQAPVAVADT---- 443
M+ +R + +E+LQ +T
Sbjct: 418 RMRNKNKRFGGGGGSRPAHLPQGQFAPRAVGRGFSNPSITNAHQEILQGRQQAQNTEAAI 477
Query: 444 ----------------------VKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVE 481
V+L E G+KERYY KF + P ++ + V L+YV
Sbjct: 478 KLKAMLRSAVNDDDEDDFSHDEVRLWEDGFKERYYESKFAV--PPTDEEFRSKVALEYVR 535
Query: 482 GLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDLEITFFLG-EPFRPFDQLMGTLPA 540
GLCWV +YYYQ V SW+WF+PYHYAPFASD D+S + F G +PFRP +QLMG PA
Sbjct: 536 GLCWVLQYYYQGVPSWKWFFPYHYAPFASDFLDISSVITVFKKGTKPFRPLEQLMGVFPA 595
Query: 541 ASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKK 600
AS S +P+ + LM DP SPI FYP DF+ID+NGK+FAWQGV LPF+DEK L + K
Sbjct: 596 ASRSHVPQPWGELMVDPESPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEKRLKKAVKS 655
Query: 601 LEVFLTEEELFRNSVMLDLLYVHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVNASGGM 660
L LTE+E RN + + ++V H Y + ++ A++++ + G+
Sbjct: 656 LFDELTEDEKRRNVLGENQIFVGKHHKGYDFMRGLAGEVANSADEEFVAFKMESSYFSGI 715
Query: 661 NGYIWLCERNGLRS-IIPSPVKGLPDI 686
+G ++ E+ + + SPV+GL I
Sbjct: 716 SGLVFASEKCVVAGETLDSPVQGLEPI 742
>gi|301620220|ref|XP_002939479.1| PREDICTED: 5'-3' exoribonuclease 2 [Xenopus (Silurana) tropicalis]
gi|89271859|emb|CAJ82319.1| 5'-3' exoribonuclease 2 [Xenopus (Silurana) tropicalis]
Length = 931
Score = 622 bits (1605), Expect = e-175, Method: Compositional matrix adjust.
Identities = 348/751 (46%), Positives = 461/751 (61%), Gaps = 68/751 (9%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPAF+RWL+ +YP IV VEE P+ + + PVD +KPNPN +EFDNLYLDMNGII
Sbjct: 1 MGVPAFFRWLSRKYPSIIVHSVEEKPK-ECNNIKIPVDTTKPNPNEVEFDNLYLDMNGII 59
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ KPAP + D++ +IF+YID +F +VRPR+LLY+AIDGVAPRAKMNQQR+RRF
Sbjct: 60 HPCTHPEDKPAPKNEDEMMVAIFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRF 119
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQ 180
RA+K+ E+ E++R+R+E G L +E E DSN ITPGT+FM L+ L+Y+I
Sbjct: 120 RASKEGVESSEEKQRIREEVLSKGGYLPPEEVKERFDSNCITPGTEFMDNLAKCLRYYIA 179
Query: 181 ARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
RLN PGW+ VILSDA+VPGEGEHKIM YIR QR P DPNT HCL G DADLIML
Sbjct: 180 DRLNNDPGWKNLTVILSDASVPGEGEHKIMDYIRRQRAQPHHDPNTHHCLCGADADLIML 239
Query: 241 SLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH-K 299
LATHE +F+I+RE P + + C +CGQ GH EC G P + + + DTP +
Sbjct: 240 GLATHEPYFTIIREEFK-PNKPKPCGLCGQFGHEIKECQGMPREKKGEHDEFADTPPGCE 298
Query: 300 KKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREG 359
+++ F+ + VLREYL+ EL + + PF +FER VDD+VF+CFFVGNDFLPH+P+LEIREG
Sbjct: 299 QEFIFIRLNVLREYLEKELTMASLPFQFDFERSVDDWVFMCFFVGNDFLPHLPSLEIREG 358
Query: 360 AINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAY---- 415
AI+ L+++Y+ GGYLTD+G V L+RV+ + +V ED IF+KR + +
Sbjct: 359 AIDRLVNIYKNVVHKTGGYLTDSGFVNLERVQMIMLAVGEVEDNIFKKRKEDDEHFKRRQ 418
Query: 416 ---------EYNEAMKLNARRESSEELLQAPVAV------------------ADTVKLGE 448
E+ + + + + + L Q +V A +V
Sbjct: 419 KERKKRMKAEHQKPSFVTSGQFAPRALGQGSCSVPEAINNPRQEAYRMRMQNAHSVDNAS 478
Query: 449 PGYKERYYADKFEISNPEEID-------------------------KVKKDVVLKYVEGL 483
P ++ A+ + S PE D K ++ VV YVEGL
Sbjct: 479 PNTGQKRKAEGSD-SEPEPEDNIRLWEEGWKQRYYKNKFDVDASDEKFRRKVVQSYVEGL 537
Query: 484 CWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDLEITFFLG-EPFRPFDQLMGTLPAAS 542
CWV RYYYQ SW+WF+P+HYAPFASD +++S L F G +PF+P +QLMG PAAS
Sbjct: 538 CWVLRYYYQGCASWKWFFPFHYAPFASDFENISCLFKEFEKGTKPFKPLEQLMGVFPAAS 597
Query: 543 SSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLE 602
+ LPE +R LM DP S I FYP DF ID+NGK+FAWQGV LPF+DE+ L +++
Sbjct: 598 GNFLPESWRRLMNDPDSSIIDFYPDDFAIDLNGKKFAWQGVALLPFVDERRLRAALEEVY 657
Query: 603 VFLTEEELFRNSVMLDLLYVHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVNASGGMNG 662
LT +E RNS+ D ++V HPL I +LY + A +I G+ G
Sbjct: 658 PDLTPDETRRNSLGGDSIFVGESHPLNDFIH---ELYRANTTE---ATQIPPELCHGIQG 711
Query: 663 YIWLCERNGL-RSIIPSPVKGLPDIERNQAM 692
+ L E L II SPV L D+ +N A+
Sbjct: 712 KVQLEEDPILPNKIIESPVPLLRDLSQNFAI 742
>gi|413924952|gb|AFW64884.1| hypothetical protein ZEAMMB73_783884 [Zea mays]
Length = 893
Score = 619 bits (1597), Expect = e-174, Method: Compositional matrix adjust.
Identities = 320/696 (45%), Positives = 441/696 (63%), Gaps = 85/696 (12%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPV---DVSKPNPNGMEFDNLYLDMN 57
MGVP+F++WL +YP +IV +ED G G + P D PNG+ + NLYLDMN
Sbjct: 1 MGVPSFFKWLVGKYP-NIVVPAKEDDGGAGAGASSPSSPWDEPAAGPNGV-YHNLYLDMN 58
Query: 58 GIIHPCFHPDGKPAP-TSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQR 116
IIHPCFHP+ + P T++D+VF ++F+YID +F +VRP KLLYLA+DGVAPRAKMNQQR
Sbjct: 59 AIIHPCFHPEDEVCPPTTFDEVFAAMFEYIDRLFRIVRPTKLLYLAVDGVAPRAKMNQQR 118
Query: 117 TRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAK--EKPETCDSNVITPGTQFMAVLSAA 174
+RRF+AAK+A +AE EE+ LR++F G+ + A+ E E D N+ITPGT+FM LS A
Sbjct: 119 SRRFKAAKEAKDAELEEKLLREKFRAEGREVRARPRETHEVSDPNIITPGTEFMEKLSKA 178
Query: 175 LQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLD 234
L+Y++++RLN PGW+ KVILSD+NVPGEGEHK+MS+IR QR+L +DPNT HCLYGLD
Sbjct: 179 LEYYVRSRLNSDPGWKGIKVILSDSNVPGEGEHKVMSFIRGQRSLASYDPNTMHCLYGLD 238
Query: 235 ADLIMLSLATHEIHFSILREVITLPGQQEKCFVCG----QVGHLAAECHGKPGDNPADW- 289
ADLIML+LA+HE+HFSILRE + Q EKC + + +C G W
Sbjct: 239 ADLIMLALASHELHFSILREDGSRQSQPEKCISLSNEMLKTEDSSRKCRG--------WF 290
Query: 290 -NGVDDTPIHKKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFL 348
++ TP KK YQF+NIWVLREYL+ +L IPNP + ER++DDF+F+CF GNDF+
Sbjct: 291 PQVIETTP--KKPYQFVNIWVLREYLELDLKIPNPVVKTDIERLIDDFIFICFLTGNDFI 348
Query: 349 PHMPTLEIREGAINLLMHVYRREFTAMGGYLTD--------AGEVLLDRVEKFIQSVAVY 400
P +P++EI EGAI+LL+ Y++ F MGGY+ A + + R+EKF +++
Sbjct: 349 PRIPSVEIHEGAIDLLLEAYKQTFNKMGGYIVSTEKLKDKHAAYLKVSRLEKFFHELSLC 408
Query: 401 EDQIFQKRTRIQQAY---------------------EYNEAMKLNARRESS--------- 430
E++IF KR ++++ E + + L A+ S+
Sbjct: 409 EEKIFLKRYDLRESLQRKFLRQAAEECKETNYDTMEENTDGLNLTAKSFSTNCSISTYSQ 468
Query: 431 -----------------------EELLQAPVAVADTVKLGEPGYKERYYADKFEISNPEE 467
++L+++ D ++LG G+K RYY +KF + E
Sbjct: 469 DESDVKANTLELRRNLKDALRNKQDLIKSGSCKHDMIRLGLAGWKSRYYREKFGVEKLSE 528
Query: 468 IDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDLEITFFLGEP 527
+ K+K D+V +Y+EGLCWV +YY+ DV SW W+YPY++APFASD K LS +I F +P
Sbjct: 529 VGKLKNDMVQRYMEGLCWVLQYYFTDVPSWSWYYPYYHAPFASDFKGLSQFKICFTTDKP 588
Query: 528 FRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLP 587
+PFDQLM LP SS ALP+ YR LM + S + KFYP D QID +GKRF WQG+ LP
Sbjct: 589 LKPFDQLMAVLPKESSCALPKCYRELMENEESLVQKFYPSDLQIDTHGKRFLWQGIAMLP 648
Query: 588 FIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVH 623
FIDEKLL+ TK +E L E+ RN+V + +++
Sbjct: 649 FIDEKLLVSATKTVEGKLAVHEINRNAVRQEKIFMR 684
>gi|149408751|ref|XP_001505862.1| PREDICTED: 5'-3' exoribonuclease 2 [Ornithorhynchus anatinus]
Length = 950
Score = 619 bits (1595), Expect = e-174, Method: Compositional matrix adjust.
Identities = 344/763 (45%), Positives = 463/763 (60%), Gaps = 83/763 (10%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPAF+RWL+ +YP +V+ VEE P+ + GV PVD SKPNPN +EFDNLYLDMNGII
Sbjct: 1 MGVPAFFRWLSRKYPSIVVNCVEEKPK-ECNGVKIPVDTSKPNPNEVEFDNLYLDMNGII 59
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ KPAP + D++ +IF+YID +F +VRPR+LLY+AIDGVAPRAKMNQQR+RRF
Sbjct: 60 HPCTHPEDKPAPKNEDEMMVAIFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRF 119
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQ 180
RA+K+ AEA E++R+R+E G L +E E DSN ITPGT+FM L+ L+Y+I
Sbjct: 120 RASKEGAEATVEKQRVREEILAKGGYLPPEEVKERFDSNCITPGTEFMDNLAKCLRYYIA 179
Query: 181 ARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
RLN PGW+ VILSDA+ PGEGEHKIM YIR QR P DPNT HCL G DADLIML
Sbjct: 180 DRLNNEPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIML 239
Query: 241 SLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDT-PIHK 299
LATHE +F+I+RE P + + C +C Q+GH +C G + +++ + D+ P +
Sbjct: 240 GLATHEPNFTIIREEFK-PNKPKPCGLCNQLGHEVKDCQGLAREKQGEFDELADSLPCSE 298
Query: 300 KKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREG 359
++ +L + VLREYL+ EL + + PFP + ER +DD+VF+CFFVGNDFLPH+P+LEIREG
Sbjct: 299 GEFIYLRLNVLREYLEKELTMASLPFPFDIERSIDDWVFMCFFVGNDFLPHLPSLEIREG 358
Query: 360 AINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYEYNE 419
AI+ L+++Y+ GGYLT++G V L RV+ + +V ED IF+KR ++ ++ +
Sbjct: 359 AIDRLVNIYKSVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEENFKRRQ 418
Query: 420 AMK---------------------LNARRESSEELLQAPVAVADTVKL------------ 446
K L A+ S ++ P A +++
Sbjct: 419 KEKRKRMKRDHPAFTPGGILTPQPLGAKNSSGSQVASNPRQAAYEMRMQNNSSPSASPNT 478
Query: 447 -----GEP---GYKERYYADKFEISNPEEIDKVK-------------------------K 473
G P G +R D S PE D V+ +
Sbjct: 479 SFTSDGSPSPAGGIKRKVEDS--DSEPEPEDNVRLWEAGWKQRYYKNKFDVDAADEKFRR 536
Query: 474 DVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDLEITFFLG-EPFRPFD 532
VV YVEGLCWV RYYYQ SW+W+YP+HYAPFASD + ++D+ F G +PFRP +
Sbjct: 537 KVVQSYVEGLCWVLRYYYQGCASWKWYYPFHYAPFASDFEGIADMPSDFEKGTKPFRPLE 596
Query: 533 QLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEK 592
QLMG PAAS + LP +R LM+DP S I FYP DF ID+NGK++AWQGV LPF+DE+
Sbjct: 597 QLMGVFPAASGNFLPPSWRKLMSDPESSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDER 656
Query: 593 LLLRQTKKLEVFLTEEELFRNSVMLDLLYVHPQHPLYQQITLYCQLYHQLPPQDRFAWEI 652
L +++ LT +E RNS+ D+L+V HPL +LY + A +
Sbjct: 657 RLRAALEEVYPDLTPDENRRNSLGGDVLFVGKHHPL---CDFLSELY-----KTSSAEPV 708
Query: 653 DV--NASGGMNGYIWLCERNGL-RSIIPSPVKGLPDIERNQAM 692
D+ G+ G + L E L + SPV L D+ +N A+
Sbjct: 709 DIPPELCHGIQGQLTLDEEAVLPDQTVCSPVPVLRDLTQNTAI 751
>gi|449452066|ref|XP_004143781.1| PREDICTED: 5'-3' exoribonuclease 3-like [Cucumis sativus]
Length = 1101
Score = 619 bits (1595), Expect = e-174, Method: Compositional matrix adjust.
Identities = 296/413 (71%), Positives = 350/413 (84%), Gaps = 1/413 (0%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPAFYRWLA++YPL +VDV+EE+P V +G+A PVD SKPNPN +EFDNLYLDMNGII
Sbjct: 1 MGVPAFYRWLAEKYPLVVVDVIEEEPVVI-DGIAIPVDTSKPNPNKLEFDNLYLDMNGII 59
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPCFHP+ +P+PT++ +VF+ +FDYID +F++VRPRKLLY+AIDGVAPRAKMNQQR+RRF
Sbjct: 60 HPCFHPEDRPSPTTFSEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQ 180
RAAKDA +A AEE RLR+EFE+ G+ L KE+ + DSNVITPGT FMAVLS ALQY++
Sbjct: 120 RAAKDAIDAAAEETRLREEFEKEGRKLPPKEESQVFDSNVITPGTDFMAVLSIALQYYVH 179
Query: 181 ARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
RLN PGW+ KVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML
Sbjct: 180 IRLNNDPGWKNIKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 239
Query: 241 SLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIHKK 300
+LATHE+HFSILRE++ PGQQEKCF+CGQ+GH AA+C GK +++ + KK
Sbjct: 240 ALATHEVHFSILREIVFTPGQQEKCFLCGQMGHFAADCEGKAKRKSGEFDEKVEEVTIKK 299
Query: 301 KYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGA 360
YQFL+IW LREYL+YE+ IPNPPF I+ ERIVDDFVF+CFFVGNDFLPHMPTLEIREGA
Sbjct: 300 PYQFLHIWTLREYLEYEMRIPNPPFAIDIERIVDDFVFMCFFVGNDFLPHMPTLEIREGA 359
Query: 361 INLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQ 413
INLL+ VY++EF A+GGYLTD + L RVE FIQ+V YED+IFQKR R+ Q
Sbjct: 360 INLLLAVYKKEFRALGGYLTDGSKPNLQRVEHFIQAVGSYEDKIFQKRARLHQ 412
Score = 297 bits (760), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 146/268 (54%), Positives = 184/268 (68%), Gaps = 3/268 (1%)
Query: 427 RESSEELLQAPVAVADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWV 486
RE S+ + + + D +KLG PG++ERYY +KF + PEE+D ++ DVVL+Y EGLCWV
Sbjct: 536 REKSD-VFNSNKSEEDKIKLGVPGWRERYYNEKFSANTPEELDDIRNDVVLRYTEGLCWV 594
Query: 487 CRYYYQDVCSWQWFYPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSAL 546
YYY+ VCSWQWFYPYHYAPFASDLK L +L I+F LG PF+PF+QL+G PAAS+ AL
Sbjct: 595 MHYYYEGVCSWQWFYPYHYAPFASDLKGLGELNISFNLGTPFKPFNQLLGVFPAASAHAL 654
Query: 547 PEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLT 606
PE+YR LMTD +SPI FYP DF++DMNGKR++WQG+ KLPFIDE LL + K+E LT
Sbjct: 655 PEQYRKLMTDQNSPIIDFYPTDFEVDMNGKRYSWQGIAKLPFIDETRLLAEVAKVEHTLT 714
Query: 607 EEELFRNSVMLDLLYVHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVNA--SGGMNGYI 664
EEE RNS+M D+L+V HPL I QL +DR + +N S GMNGY+
Sbjct: 715 EEEARRNSIMFDMLFVTSSHPLSVSIYSLDNRCKQLAERDRTEVKEKINPEHSEGMNGYL 774
Query: 665 WLCERNGLRSIIPSPVKGLPDIERNQAM 692
C I SPV+GL DI NQ +
Sbjct: 775 SPCLGELCPPIFRSPVEGLEDIIDNQVI 802
>gi|268533146|ref|XP_002631701.1| C. briggsae CBR-XRN-2 protein [Caenorhabditis briggsae]
Length = 901
Score = 618 bits (1594), Expect = e-174, Method: Compositional matrix adjust.
Identities = 322/649 (49%), Positives = 427/649 (65%), Gaps = 22/649 (3%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPAF+RWL +YP ++V+ ED Q +G PVD ++PNPN EFDNLYLDMNGII
Sbjct: 1 MGVPAFFRWLTKKYPATVVNA-NEDRQRGVDGRRVPVDCTQPNPNFQEFDNLYLDMNGII 59
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ +PAP + D++F IF+YID IF +VRPR+LLY+AIDGVAPRAKMNQQR+RRF
Sbjct: 60 HPCTHPEDRPAPKNEDEMFALIFEYIDRIFSIVRPRRLLYMAIDGVAPRAKMNQQRSRRF 119
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPET---CDSNVITPGTQFMAVLSAALQY 177
RA+K+ AE A E R+ G + K+K E DSN ITPGT FMA L+ AL+Y
Sbjct: 120 RASKEMAEKAASIEEQRRRLIAEGIAVPQKKKDEEEAHFDSNCITPGTPFMARLADALRY 179
Query: 178 FIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADL 237
+I R+ P W ++ILSDANVPGEGEHKIM YIR QR P DPNT HCL G DADL
Sbjct: 180 YIHDRVTNDPAWANIEIILSDANVPGEGEHKIMDYIRKQRGNPAHDPNTVHCLCGADADL 239
Query: 238 IMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPI 297
IML +ATHE +F+I+RE +P Q C +CGQ GH EC G +N D P
Sbjct: 240 IMLGIATHEANFNIIREEF-VPNQPRACELCGQYGHELKECRG--AENDTDLGDEYCKPE 296
Query: 298 HKKK-YQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEI 356
++K + FL I VLREYL+ E+ +PN PF N ER +DD+VFLCFFVGNDFLPH+P+LEI
Sbjct: 297 QREKNFIFLRIPVLREYLEKEMAMPNLPFQFNLERALDDWVFLCFFVGNDFLPHLPSLEI 356
Query: 357 REGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYE 416
REGAI+ L+ +Y+ M GYLT G LDRVE ++ + ED+IF++R + ++ ++
Sbjct: 357 REGAIDRLIKLYKEMVYEMKGYLTKDGIPELDRVEMIMRGLGKVEDEIFKRRQQDEERFK 416
Query: 417 YNEA-----MKLNARRESSEE---LLQAPVAVADTVKLGEPGYKERYYADKFEISNPEEI 468
N+ M+ R+ +E+ + D ++L E G+KERYY KF++ + +++
Sbjct: 417 ENQKNKKARMQQYGRKRKAEQPIIITDEDEEPKDDIRLYESGWKERYYRAKFDVGS-DDV 475
Query: 469 DKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDLEITFFL-GEP 527
D + V YVEGLCWV RYYYQ SW W++PYHYAPFASD + + + + F +P
Sbjct: 476 D-FRHRVAWAYVEGLCWVLRYYYQGCSSWDWYFPYHYAPFASDFETVGEFKPDFTRPTKP 534
Query: 528 FRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLP 587
F P +QLM PAAS LP +++ LMT+ SPI YP DF+ID+NGK++AWQGV LP
Sbjct: 535 FNPLEQLMSVFPAASKQHLPVEWQKLMTEDESPIIDLYPADFRIDLNGKKYAWQGVALLP 594
Query: 588 FIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYV---HPQHPLYQQIT 633
F+DE+ LL K + LT+EE +RN+ + +++ H +QQ+
Sbjct: 595 FVDEQRLLETLKSVYPTLTDEEKYRNTRGPNRIFIGRNHKSFAFFQQVA 643
>gi|403283597|ref|XP_003933201.1| PREDICTED: 5'-3' exoribonuclease 2 isoform 1 [Saimiri boliviensis
boliviensis]
Length = 950
Score = 616 bits (1589), Expect = e-173, Method: Compositional matrix adjust.
Identities = 345/763 (45%), Positives = 455/763 (59%), Gaps = 83/763 (10%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPAF+RWL+ +YP IV+ VEE P+ + GV PVD SKPNPN +EFDNLYLDMNGII
Sbjct: 1 MGVPAFFRWLSRKYPSIIVNCVEEKPK-ECNGVKIPVDASKPNPNDVEFDNLYLDMNGII 59
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ KPAP + D++ +IF+YID +F +VRPR+LLY+AIDGVAPRAKMNQQR+RRF
Sbjct: 60 HPCTHPEDKPAPKNEDEMMVAIFEYIDRLFSIVRPRRLLYMAIDGVAPRAKMNQQRSRRF 119
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQ 180
RA+K+ EA E++R+R+E G L +E E DSN ITPGT+FM L+ L+Y+I
Sbjct: 120 RASKEGMEAAVEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIA 179
Query: 181 ARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
RLN PGW+ VILSDA+ PGEGEHKIM YIR QR P DPNT HCL G DADLIML
Sbjct: 180 DRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIML 239
Query: 241 SLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDT-PIHK 299
LATHE +F+I+RE P + + C +C Q GH +C G P + + + D+ P +
Sbjct: 240 GLATHEPNFTIIREEFK-PNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADSLPCAE 298
Query: 300 KKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREG 359
++ FL + VLREYL+ EL + + PF + ER +DD+VF+CFFVGNDFLPH+P+LEIREG
Sbjct: 299 GEFIFLRLNVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREG 358
Query: 360 AINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYEYNE 419
AI+ L+++Y+ GGYLT++G V L RV+ + +V ED IF+KR + ++ +
Sbjct: 359 AIDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSFRRRQ 418
Query: 420 AM---------------------KLNARRESSEELLQAPVAVADTVKL------------ 446
L +R S ++ P A +++
Sbjct: 419 KEKRKRMKRDQPAFTPTGILTPHALGSRNSPSSQVASNPRQAAYEMRMQNNSSPSVSPNT 478
Query: 447 -----GEP---GYKERYYADKFEISNPEEIDKVK-------------------------K 473
G P G +R D S PE D V+ +
Sbjct: 479 SFTSDGSPSPIGGIKRKAEDS--DSEPEPEDNVRLWEAGWKQRYYKNKFDVDAADEKFRR 536
Query: 474 DVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDLEITFFLG-EPFRPFD 532
VV YVEGLCWV RYYYQ SW+W+YP+HYAPFASD + ++D+ F G +PF+P +
Sbjct: 537 KVVQSYVEGLCWVLRYYYQGCASWKWYYPFHYAPFASDFEGIADMPSDFEKGTKPFKPLE 596
Query: 533 QLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEK 592
QLMG PAAS + LP +R LM+DP S I FYP DF ID+NGK++AWQGV LPF+DE+
Sbjct: 597 QLMGVFPAASGNFLPPSWRKLMSDPDSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDER 656
Query: 593 LLLRQTKKLEVFLTEEELFRNSVMLDLLYVHPQHPLYQQITLYCQLYHQLPPQDRFAWEI 652
L +++ LT EE RNS+ D+L+V HPL+ I Q P +
Sbjct: 657 RLRAALEEVYPDLTPEETRRNSLGGDVLFVGKHHPLHDFILELYQTGSTEP--------V 708
Query: 653 DV--NASGGMNGYIWLCERNGL-RSIIPSPVKGLPDIERNQAM 692
DV G+ G L E L I+ SPV L D+ +N +
Sbjct: 709 DVPPELCHGIQGKFSLDEEAILPDRIVCSPVPMLRDLTQNTVV 751
>gi|296200314|ref|XP_002747533.1| PREDICTED: 5'-3' exoribonuclease 2 isoform 1 [Callithrix jacchus]
Length = 950
Score = 616 bits (1589), Expect = e-173, Method: Compositional matrix adjust.
Identities = 345/763 (45%), Positives = 455/763 (59%), Gaps = 83/763 (10%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPAF+RWL+ +YP IV+ VEE P+ + GV PVD SKPNPN +EFDNLYLDMNGII
Sbjct: 1 MGVPAFFRWLSRKYPSIIVNCVEEKPK-ECNGVKIPVDASKPNPNDVEFDNLYLDMNGII 59
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ KPAP + D++ +IF+YID +F +VRPR+LLY+AIDGVAPRAKMNQQR+RRF
Sbjct: 60 HPCTHPEDKPAPKNEDEMMVAIFEYIDRLFSIVRPRRLLYMAIDGVAPRAKMNQQRSRRF 119
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQ 180
RA+K+ EA E++R+R+E G L +E E DSN ITPGT+FM L+ L+Y+I
Sbjct: 120 RASKEGMEAAVEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIA 179
Query: 181 ARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
RLN PGW+ VILSDA+ PGEGEHKIM YIR QR P DPNT HCL G DADLIML
Sbjct: 180 DRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIML 239
Query: 241 SLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDT-PIHK 299
LATHE +F+I+RE P + + C +C Q GH +C G P + + + D+ P +
Sbjct: 240 GLATHEPNFTIIREEFK-PNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADSLPCAE 298
Query: 300 KKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREG 359
++ FL + VLREYL+ EL + + PF + ER +DD+VF+CFFVGNDFLPH+P+LEIREG
Sbjct: 299 GEFIFLRLNVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREG 358
Query: 360 AINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYEYNE 419
AI+ L+++Y+ GGYLT++G V L RV+ + +V ED IF+KR + ++ +
Sbjct: 359 AIDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSFRRRQ 418
Query: 420 AM---------------------KLNARRESSEELLQAPVAVADTVKL------------ 446
L +R S ++ P A +++
Sbjct: 419 KEKRKRMKRDQPAFTPTGILTPHALGSRNSPSSQVANNPRQAAYEMRMQNNSSPSVSPNT 478
Query: 447 -----GEP---GYKERYYADKFEISNPEEIDKVK-------------------------K 473
G P G +R D S PE D V+ +
Sbjct: 479 SFTSDGSPSPIGGIKRKAEDS--DSEPEPEDNVRLWEAGWKQRYYKNKFDVDAADEKFRR 536
Query: 474 DVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDLEITFFLG-EPFRPFD 532
VV YVEGLCWV RYYYQ SW+W+YP+HYAPFASD + ++D+ F G +PF+P +
Sbjct: 537 KVVQSYVEGLCWVLRYYYQGCASWKWYYPFHYAPFASDFEGIADMPSDFEKGTKPFKPLE 596
Query: 533 QLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEK 592
QLMG PAAS + LP +R LM+DP S I FYP DF ID+NGK++AWQGV LPF+DE+
Sbjct: 597 QLMGVFPAASGNFLPPSWRKLMSDPDSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDER 656
Query: 593 LLLRQTKKLEVFLTEEELFRNSVMLDLLYVHPQHPLYQQITLYCQLYHQLPPQDRFAWEI 652
L +++ LT EE RNS+ D+L+V HPL+ I Q P +
Sbjct: 657 RLRAALEEVYPDLTPEETRRNSLGGDVLFVGKHHPLHDFILELYQTGSTEP--------V 708
Query: 653 DV--NASGGMNGYIWLCERNGL-RSIIPSPVKGLPDIERNQAM 692
DV G+ G L E L I+ SPV L D+ +N +
Sbjct: 709 DVPPELCHGIQGKFSLDEEAILPDQIVCSPVPMLRDLTQNTVV 751
>gi|347971217|ref|XP_309641.5| AGAP004090-PA [Anopheles gambiae str. PEST]
gi|333466642|gb|EAA05380.5| AGAP004090-PA [Anopheles gambiae str. PEST]
Length = 1042
Score = 613 bits (1580), Expect = e-172, Method: Compositional matrix adjust.
Identities = 348/772 (45%), Positives = 451/772 (58%), Gaps = 95/772 (12%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPAF+RWL+ +YP I++ VE+ VD +G ++S PNPN +EFDNLYLDMNGII
Sbjct: 1 MGVPAFFRWLSRKYPSVIIECVEQK-AVDDQGNVVYENLSDPNPNRVEFDNLYLDMNGII 59
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ KPAP + D++ +IF+ ID + +VRPRK+LY+AIDGVAPRAKMNQQR+RRF
Sbjct: 60 HPCTHPEDKPAPKNEDEMMIAIFECIDRLMNIVRPRKVLYMAIDGVAPRAKMNQQRSRRF 119
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLL-SAKEKPETCDSNVITPGTQFMAVLSAALQYFI 179
RA+K+ AE AE R+R+E G +L KEK DSN ITPGT FM LS LQY++
Sbjct: 120 RASKETAEKAAEMARIREELAAKGAILPPEKEKGSHFDSNCITPGTPFMDRLSRCLQYYV 179
Query: 180 QARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIM 239
R+N PGW+ KVILSDANVPGEGEHKIM YIR QR P +DPNT H L G DADLIM
Sbjct: 180 HDRMNNNPGWKNLKVILSDANVPGEGEHKIMDYIRKQRVQPDYDPNTHHVLCGADADLIM 239
Query: 240 LSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHG-----KPGDNPADWNGVDD 294
L LATHE HF+I+RE LP + C +C Q+GH C G + D P
Sbjct: 240 LGLATHETHFTIIREEF-LPNKDRPCDICQQIGHEMKSCTGLQSERELADKPP------P 292
Query: 295 TPIHKKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTL 354
P + ++ F+ + VL+EYLQ ELD+PN PFP +FER+VDD+VF+CFFVGNDFLPH+P+L
Sbjct: 293 MPGKETQFIFVRLNVLKEYLQKELDMPNLPFPYDFERVVDDWVFMCFFVGNDFLPHLPSL 352
Query: 355 EIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQA 414
EIRE AI+ L+ +Y++ GYLTD+G VLLDRVE + + ED+IF++R +
Sbjct: 353 EIRENAIDRLVTLYKKCVYKTRGYLTDSGSVLLDRVEMIMTDLGFAEDEIFRQRKVSEDR 412
Query: 415 Y-EYNEAMKLNARRESSEELLQ---------------APVAVADTVK-------LGEPGY 451
+ E N+ M++ R+ Q P AV + K LG+ G
Sbjct: 413 FKERNKRMRMQNERQRRPNFEQYNNSQFAPTPLGRGVQPQAVVNARKEAAHFRMLGQGGN 472
Query: 452 -KERYYADKFEISNP------------------EEIDKVKKDVVLKYVEG---------- 482
ER A ++P E+ +K D V + +G
Sbjct: 473 DNERVAAGNNSANDPSPRGTKRKAEEPLAVTVTEDEEKETPDEVRLWEDGFKDRYYESKF 532
Query: 483 --------------------LCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDLEITF 522
LCWV RYYYQ SW+W++PYHYAPFASD K L ++ F
Sbjct: 533 DVMPQNIKFRQTVAWEYVRGLCWVLRYYYQGCASWEWYFPYHYAPFASDFKHLENVNTHF 592
Query: 523 FLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQG 582
G PF+P QLMG PAAS S +P + LM DP SPI FYP DF+ID+NGK+FAWQG
Sbjct: 593 DRGTPFKPLQQLMGVFPAASRSHVPPAFAELMVDPRSPIIDFYPIDFRIDLNGKKFAWQG 652
Query: 583 VVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVHPQHPLYQQITLYCQLYHQL 642
V LPF+DEK L + T LTEEE RN L+V P Y+ + LY
Sbjct: 653 VALLPFVDEKRLFKATDPKVPLLTEEERLRNENGDAKLFVLPGSTGYRTL---AGLYG-- 707
Query: 643 PPQDRFAWEIDVNASGG-MNGYIWLCERNGLR-SIIPSPVKGLPDIERNQAM 692
D + +V + + G++ + N R ++PSP+ GLP + NQ +
Sbjct: 708 --GDDVDYNREVPITVDYVEGFVVPTKENVPREGMLPSPIPGLPAVTENQVL 757
>gi|432946152|ref|XP_004083793.1| PREDICTED: 5'-3' exoribonuclease 2-like [Oryzias latipes]
Length = 972
Score = 612 bits (1577), Expect = e-172, Method: Compositional matrix adjust.
Identities = 336/726 (46%), Positives = 437/726 (60%), Gaps = 83/726 (11%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPAF+RWL+ +YP IV VEE + + GV PVD +KPNPN +EFDNLYLDMNGII
Sbjct: 1 MGVPAFFRWLSRKYPSIIVHCVEEKGK-ECNGVRIPVDTTKPNPNEVEFDNLYLDMNGII 59
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ KPAP + D++ +IF+YID +F +VRPR++LY+AIDGVAPRAKMNQQR+RRF
Sbjct: 60 HPCTHPEDKPAPKNEDEMMVAIFEYIDRLFNIVRPRRVLYMAIDGVAPRAKMNQQRSRRF 119
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQ 180
RA+K+ E E++R+R+E + G L +E E DSN ITPGT+FM L+ L+Y++
Sbjct: 120 RASKEGVELVDEKQRMREEIIQRGGYLPPEEIKERFDSNCITPGTEFMDNLAHCLRYYVA 179
Query: 181 ARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
RL+ PGW+ V LSDA+VPGEGEHKIM +IR QR P DPNT HCL G DADLIML
Sbjct: 180 ERLSNDPGWKNVVVFLSDASVPGEGEHKIMDFIRRQRAQPNHDPNTHHCLCGADADLIML 239
Query: 241 SLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDT-PIHK 299
LATHE +F+I+RE P + C +CGQ GH +C G + + DT P+ +
Sbjct: 240 GLATHEPNFTIIREEFK-PNKPRPCSLCGQTGHEMKDCQGVAREKQGQHDEFADTMPVSE 298
Query: 300 KKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREG 359
+++ F+ + VLREYL+ EL + + PFP +FER VDD+VF+CFFVGNDFLPH+P+LEIREG
Sbjct: 299 QEFIFIRLCVLREYLERELTMASLPFPFDFERSVDDWVFMCFFVGNDFLPHLPSLEIREG 358
Query: 360 AINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTR--------- 410
AI+ L+++Y+ GGYLT G V L+RVE +Q+V V ED IF+KR
Sbjct: 359 AIDRLVNIYKDVVHKTGGYLTQNGYVNLERVEMIMQAVGVAEDNIFKKRKEDEENFRRRN 418
Query: 411 -----------------------------------IQQAYEYNEAMKLNARRESSEELLQ 435
IQ A M++N R ++++ Q
Sbjct: 419 KEKRKRMKVEQQGPAYLTTGQFAPQALGRRDVPEPIQNARHQAYDMRMNPREQNNKNAAQ 478
Query: 436 APVAVADTVKLGEPGYKE----RYYADKFE--ISNPEEIDKV------------------ 471
+ A+ G E R K E S+PE D V
Sbjct: 479 SLKAMLRNEGSSSSGANESQDRRAPKRKAEDSDSDPEPEDNVRLWEDGWKQRYYKNKFDV 538
Query: 472 -------KKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDLEITFFL 524
+K VV YVEGLCWV RYYYQ SW+W++P+HYAPFASD KD+ ++ F
Sbjct: 539 DVTDSDFRKKVVQSYVEGLCWVLRYYYQGCASWKWYFPFHYAPFASDFKDIKEMFTEFEK 598
Query: 525 GE-PFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGV 583
PF+P +QLM PAAS + LP +RNLM P S I FYP DF ID+NGK++AWQGV
Sbjct: 599 DTMPFKPLEQLMSVFPAASGNFLPPTWRNLMVSPESSIIDFYPDDFAIDLNGKKYAWQGV 658
Query: 584 VKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVHPQHPLYQQI-TLY---CQLY 639
LPF+DE+ L ++ LT EE RNS+ D+L+V HPLY I LY C
Sbjct: 659 ALLPFVDERRLRAALAEVYPDLTPEEARRNSLGSDVLFVGKSHPLYDFIHELYRDECNKG 718
Query: 640 HQLPPQ 645
+PP+
Sbjct: 719 TVVPPE 724
>gi|148696566|gb|EDL28513.1| 5'-3' exoribonuclease 2, isoform CRA_a [Mus musculus]
Length = 915
Score = 611 bits (1576), Expect = e-172, Method: Compositional matrix adjust.
Identities = 337/728 (46%), Positives = 446/728 (61%), Gaps = 49/728 (6%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPAF+RWL+ +YP IV+ VEE P+ + GV PVD SKPNPN +EFDNLYLDMNGII
Sbjct: 1 MGVPAFFRWLSRKYPSIIVNCVEEKPK-ECNGVKIPVDASKPNPNDVEFDNLYLDMNGII 59
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ KPAP + D++ +IF+YID +F +VRPR+LLY+AIDGVAPRAKMNQQR+RRF
Sbjct: 60 HPCTHPEDKPAPKNEDEMMVAIFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRF 119
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQ 180
RA+K+ EA E++R+R+E G L +E E DSN ITPGT+FM L+ L+Y+I
Sbjct: 120 RASKEGMEAAVEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIA 179
Query: 181 ARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
RLN PGW+ VILSDA+ PGEGEHKIM YIR QR P DPNT HCL G DADLIML
Sbjct: 180 DRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIML 239
Query: 241 SLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDT-PIHK 299
LATHE +F+I+RE P + + C +C Q GH +C G P + + + D+ P +
Sbjct: 240 GLATHEPNFTIIREEFK-PNKPKPCALCNQFGHEVKDCEGLPREKKGKHDELADSLPCAE 298
Query: 300 KKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREG 359
++ FL + VLREYL+ EL + + PFP + ER +DD+VF+CFFVGNDFLPH+P+LEIREG
Sbjct: 299 GEFIFLRLNVLREYLERELTMASLPFPFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREG 358
Query: 360 AINLLMHVYRREFTAMGGY------------------LTDAG----EVLLDRVEKFIQSV 397
AI+ L+++Y+ G T +G L R Q
Sbjct: 359 AIDRLVNIYKNVVHKTGDSFRRRQKEKRKRMKRDQPAFTPSGILTPHALGSRNSPGCQVA 418
Query: 398 AVYEDQIFQKRTRIQQAYEYNEAMK---------LNARRESSEELLQAPVAVADTVKLGE 448
+ ++ R + + + L + +E+ P D V+L E
Sbjct: 419 SNPRQAAYEMRMQRNSSPSISPNTSFASDGSPSPLGGIKRKAEDSDSEP-EPEDNVRLWE 477
Query: 449 PGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPF 508
G+K+RYY +KF++ +E K ++ VV YVEGLCWV RYYYQ SW+W+YP+HYAPF
Sbjct: 478 AGWKQRYYKNKFDVDAADE--KFRRKVVQSYVEGLCWVLRYYYQGCASWKWYYPFHYAPF 535
Query: 509 ASDLKDLSDLEITFFLG-EPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPP 567
ASD + ++D+ F G +PF+P +QLMG PAAS + LP +R LM+DP S I FYP
Sbjct: 536 ASDFEGIADMSSEFEKGTKPFKPLEQLMGVFPAASGNFLPPTWRKLMSDPDSSIIDFYPE 595
Query: 568 DFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVHPQHP 627
DF ID+NGK++AWQGV LPF+DE+ L +++ LT EE RNS+ D+L+V HP
Sbjct: 596 DFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEENRRNSLGGDVLFVGKLHP 655
Query: 628 LYQQITLYCQLYHQLPPQDRFAWEIDV--NASGGMNGYIWLCERNGL-RSIIPSPVKGLP 684
L I Q P +DV G+ G L E L + SPV L
Sbjct: 656 LRDFILELYQTGSTEP--------VDVPPELCHGIQGTFSLDEEAILPDQTVCSPVPMLR 707
Query: 685 DIERNQAM 692
D+ +N A+
Sbjct: 708 DLTQNTAV 715
>gi|255538898|ref|XP_002510514.1| 5'->3' exoribonuclease, putative [Ricinus communis]
gi|223551215|gb|EEF52701.1| 5'->3' exoribonuclease, putative [Ricinus communis]
Length = 1113
Score = 611 bits (1575), Expect = e-172, Method: Compositional matrix adjust.
Identities = 295/414 (71%), Positives = 351/414 (84%), Gaps = 2/414 (0%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPAFYRWLA++YPL +VD +EE+P V +GV PVD S+PNPN +E+DNLYLDMNGII
Sbjct: 1 MGVPAFYRWLAEKYPLVVVDAIEEEPVVI-DGVKIPVDASRPNPNNIEYDNLYLDMNGII 59
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPCFHP+ +P+PTS+++VF+ +FDYID +F++VRPRKLLY+AIDGVAPRAKMNQQR+RRF
Sbjct: 60 HPCFHPEDRPSPTSFEEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQ 180
RAAKD EA AEEERLR+EFE G+ L KE + DSN+ITPGT+FMAVLS ALQY+I
Sbjct: 120 RAAKDREEAAAEEERLRQEFEREGRKLPPKESSQVFDSNIITPGTEFMAVLSIALQYYIH 179
Query: 181 ARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
RLN PGW+ KVILSDANVPGEGEHK+MSYIRLQRNLPG+DPNTRHCLYGLDADLIML
Sbjct: 180 LRLNNDPGWKKVKVILSDANVPGEGEHKVMSYIRLQRNLPGYDPNTRHCLYGLDADLIML 239
Query: 241 SLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWN-GVDDTPIHK 299
+LATHEIHFSILRE++ PGQQ+KCF+CGQ+GHLAA+C GK +++ D+ + K
Sbjct: 240 ALATHEIHFSILREIVFTPGQQDKCFLCGQMGHLAADCEGKAKRKAGEFDEKGDEGAVAK 299
Query: 300 KKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREG 359
K YQFLNIW LREYL+ E+ IPNPPF I+FE IVDDF+F+CFFVGNDFLPHMPTLEIREG
Sbjct: 300 KPYQFLNIWTLREYLELEMRIPNPPFKIDFECIVDDFIFMCFFVGNDFLPHMPTLEIREG 359
Query: 360 AINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQ 413
AINLL+ VY++EFTAMGGYLTD + L +VE FIQ+V YED+IFQKR R+ Q
Sbjct: 360 AINLLLAVYKKEFTAMGGYLTDGCKPNLSKVEHFIQAVGSYEDKIFQKRARLHQ 413
Score = 295 bits (756), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 155/330 (46%), Positives = 204/330 (61%), Gaps = 9/330 (2%)
Query: 365 MHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYEYNEAMKLN 424
+ V F+A+ G V +V + S +V + + + + +E + +K
Sbjct: 472 LDVRSAHFSALDG---KGSSVQAHKVARLSSSASVGAAIVEAENSLEIEVHENKDELKAK 528
Query: 425 AR---RESSEELLQAPVAVADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVE 481
+ RE S+ + D ++LG+PG+KERYY +KF PEE++ +++DVVL+Y E
Sbjct: 529 LKEILREKSD-AFNSKNPEEDKIRLGDPGWKERYYEEKFSGKTPEELEDIRRDVVLRYTE 587
Query: 482 GLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAA 541
GLCWV YYY+ VCSWQWFYPYHYAPFASDLK L L+I F LG PF+PF+QL+G PAA
Sbjct: 588 GLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKHLGQLDIKFELGSPFKPFNQLLGVFPAA 647
Query: 542 SSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKL 601
SS ALP YR LM+DP+SPI FYP DF++DMNGKR+AWQG+ KLPFIDE LL + KK+
Sbjct: 648 SSHALPVHYRKLMSDPNSPIIDFYPTDFEVDMNGKRYAWQGIAKLPFIDEVRLLAEVKKI 707
Query: 602 EVFLTEEELFRNSVMLDLLYVHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVNA--SGG 659
E LTEEE RNS M D+L+V H L + I L QL ++R + +N S G
Sbjct: 708 EHTLTEEEARRNSAMFDMLFVLSSHSLAESIYLLDNNCKQLTDRERVEVKERINPELSDG 767
Query: 660 MNGYIWLCERNGLRSIIPSPVKGLPDIERN 689
MNGYI C + I SPV G+ DI N
Sbjct: 768 MNGYISPCSGDTHPPIFRSPVAGMEDILDN 797
>gi|241786594|ref|XP_002414458.1| 5'->3' exoribonuclease, putative [Ixodes scapularis]
gi|215508669|gb|EEC18123.1| 5'->3' exoribonuclease, putative [Ixodes scapularis]
Length = 759
Score = 610 bits (1574), Expect = e-172, Method: Compositional matrix adjust.
Identities = 330/674 (48%), Positives = 424/674 (62%), Gaps = 52/674 (7%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPAF+RWL+ +YP +V VEE VDG V PVD++KPNPN +EFDNLYLDMNGII
Sbjct: 1 MGVPAFFRWLSKKYPSIVVHCVEEK-VVDG--VKVPVDMTKPNPNDVEFDNLYLDMNGII 57
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ KPAP + D++ IF+YID I +VRPR+LLY+AIDGVAPRAKMNQQR+RRF
Sbjct: 58 HPCCHPENKPAPKNEDEMMVDIFEYIDRIMSVVRPRRLLYMAIDGVAPRAKMNQQRSRRF 117
Query: 121 RAAKDAAEAEAEEERLRKEFEEAG-KLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFI 179
RA+K+ AE E R+R E + G L K K E DSN ITPGT FMA L+ L Y++
Sbjct: 118 RASKETAEKVEEMSRIRTELRDKGIPLPPEKPKSEHFDSNCITPGTPFMARLAKCLHYYV 177
Query: 180 QARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIM 239
R+N PGW+ +VILSDANVPGEGEHKIM +IR QR P DPNT HCL G DADLIM
Sbjct: 178 HDRMNNDPGWKNIEVILSDANVPGEGEHKIMDFIRRQRANPKHDPNTHHCLCGADADLIM 237
Query: 240 LSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH- 298
L LATHE +F+I+RE P Q C +CGQ+GH +C G + G + PI
Sbjct: 238 LGLATHEPNFTIIREEFK-PNQPRPCELCGQLGHEMKDCQGLAKEK----TGELEKPIGC 292
Query: 299 KKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIRE 358
+ ++ FL + VLREYL +L + N PF N ER +DD+VF+CFFVGNDFLPH+P+LEIRE
Sbjct: 293 ETEFIFLRLNVLREYLTRDLHMDNLPFTFNIERAIDDWVFMCFFVGNDFLPHLPSLEIRE 352
Query: 359 GAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFI-------------QSVAVYEDQIF 405
GAI+ L+ +Y++ GGYLT+ G V L+RV+ + Q+V ++
Sbjct: 353 GAIDRLITLYKKAVYKTGGYLTENGFVALERVQLIMSGKCGFSLLLAVGQAVGATQNARR 412
Query: 406 QKRTRIQQAYEYNEAMKL-NARRESSEELLQAPVAVA----------------------- 441
+ ++ E+ + N E + PV+V
Sbjct: 413 EAYDMRREGMEHRRNLSTGNLAANGPLESMLRPVSVRSSAPSSPHPSLGHEGDDSSDEEE 472
Query: 442 --DTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQW 499
D V+L E G+KERYY KF+I N + + + +V YVEGLCWV RYYYQ SW+W
Sbjct: 473 PHDEVRLWEDGWKERYYVSKFDI-NSDNV-AFRHEVATAYVEGLCWVLRYYYQGCASWKW 530
Query: 500 FYPYHYAPFASDLKDLSDLEITFFL-GEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPS 558
F+PYHYAPFASD ++ D++I F +PF+P +QLM PAAS LP + +LM DP
Sbjct: 531 FFPYHYAPFASDFINVGDIKINFERDTQPFKPMEQLMSVFPAASKQHLPPAFGDLMDDPD 590
Query: 559 SPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLD 618
SPI FYP DF+ID+NGK++AWQGV LPF+DE+ LL K + LTE+E+ RN D
Sbjct: 591 SPIIDFYPIDFKIDLNGKKYAWQGVALLPFVDERRLLETVKTVYPTLTEDEVKRNIRGDD 650
Query: 619 LLYVHPQHPLYQQI 632
+ YV H Y +
Sbjct: 651 VFYVRKGHRGYSYL 664
>gi|149041186|gb|EDL95119.1| 5'-3' exoribonuclease 2 (predicted), isoform CRA_b [Rattus
norvegicus]
Length = 915
Score = 610 bits (1574), Expect = e-172, Method: Compositional matrix adjust.
Identities = 338/730 (46%), Positives = 447/730 (61%), Gaps = 53/730 (7%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPAF+RWL+ +YP IV+ VEE P+ + GV PVD SKPNPN +EFDNLYLDMNGII
Sbjct: 1 MGVPAFFRWLSRKYPSIIVNCVEEKPK-ECNGVKIPVDASKPNPNDVEFDNLYLDMNGII 59
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ KPAP + D++ +IF+YID +F +VRPR+LLY+AIDGVAPRAKMNQQR+RRF
Sbjct: 60 HPCTHPEDKPAPKNEDEMMVAIFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRF 119
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQ 180
RA+K+ EA E++R+R+E G L +E E DSN ITPGT+FM L+ L+Y+I
Sbjct: 120 RASKEGMEAAVEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIA 179
Query: 181 ARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
RLN PGW+ VILSDA+ PGEGEHKIM YIR QR P DPNT HCL G DADLIML
Sbjct: 180 DRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIML 239
Query: 241 SLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDT-PIHK 299
LATHE +F+I+RE P + + C +C Q GH +C G P + + + D+ P +
Sbjct: 240 GLATHEPNFTIIREEFK-PNKPKPCALCNQFGHEVKDCEGLPREKKGKHDELADSLPCAE 298
Query: 300 KKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREG 359
++ FL + VLREYL+ EL + + PFP + ER +DD+VF+CFFVGNDFLPH+P+LEIREG
Sbjct: 299 GEFIFLRLNVLREYLERELTMASLPFPFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREG 358
Query: 360 AINLLMHVYRREFTAMG------------------------GYLTDAGEVLLDRVEKFIQ 395
AI+ L+++Y+ G G LT L R Q
Sbjct: 359 AIDRLVNIYKNVVHKTGDSFRRRQKEKRKRMKRDQPAFTPSGILTPY--ALGSRNSPGCQ 416
Query: 396 SVAVYEDQIFQKRTRIQQAYEYNEAMK---------LNARRESSEELLQAPVAVADTVKL 446
+ ++ R + + + L + +E+ P D V+L
Sbjct: 417 VASNPRQAAYEMRMQSNSSPSISPNTSFASDGSPSPLGGLKRKAEDSDSEP-EPEDNVRL 475
Query: 447 GEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYA 506
E G+K+RYY +KF++ +E K ++ VV YVEGLCWV RYYYQ SW+W+YP+HYA
Sbjct: 476 WEAGWKQRYYKNKFDVDAADE--KFRRKVVQSYVEGLCWVLRYYYQGCASWKWYYPFHYA 533
Query: 507 PFASDLKDLSDLEITFFLG-EPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFY 565
PFASD + ++D+ F G +PF+P +QLMG PAAS + LP +R LM+DP S I FY
Sbjct: 534 PFASDFEGIADMPSEFEKGTKPFKPLEQLMGVFPAASGNFLPPTWRKLMSDPDSSIIDFY 593
Query: 566 PPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVHPQ 625
P DF ID+NGK++AWQGV LPF+DE+ L +++ LT EE RNS+ D+L+V
Sbjct: 594 PEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEENRRNSLGSDVLFVGKV 653
Query: 626 HPLYQQITLYCQLYHQLPPQDRFAWEIDV--NASGGMNGYIWLCERNGL-RSIIPSPVKG 682
HPL+ I Q P +DV G+ G L E L + SPV
Sbjct: 654 HPLHDFILELYQTGSTEP--------VDVPPELCHGIQGKFSLDEEAILPDQTVCSPVPM 705
Query: 683 LPDIERNQAM 692
L D+ +N A+
Sbjct: 706 LRDLTQNTAI 715
>gi|357615796|gb|EHJ69836.1| hypothetical protein KGM_03375 [Danaus plexippus]
Length = 699
Score = 609 bits (1570), Expect = e-171, Method: Compositional matrix adjust.
Identities = 327/664 (49%), Positives = 422/664 (63%), Gaps = 63/664 (9%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDP-QVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGI 59
MGVPAF+RWL+ +YP IV+ VE+ P VDG+ + D S PNPNG+EFDNLYLDMNGI
Sbjct: 1 MGVPAFFRWLSRKYPSVIVECVEQRPTDVDGQLIY--ADSSLPNPNGIEFDNLYLDMNGI 58
Query: 60 IHPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRR 119
IHPC HP+ KP P D++ +IF+ ID +F +VRPRKLLY+AIDGVAPRAKMNQQR+RR
Sbjct: 59 IHPCTHPEDKPPPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
Query: 120 FRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETC--DSNVITPGTQFMAVLSAALQY 177
FRA+K+ E E R+R E + G L E+P+ DSN ITPGT FM LS L Y
Sbjct: 119 FRASKETQEKIDEIARIRNELQVKGAYLPP-ERPKEAHFDSNCITPGTPFMDRLSKCLHY 177
Query: 178 FIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADL 237
+I RLN PGW+ KVILSDANVPGEGEHKIM YIR QR P DPNT+H L G DADL
Sbjct: 178 YIHDRLNNDPGWKGVKVILSDANVPGEGEHKIMDYIRRQRAQPDHDPNTQHVLCGADADL 237
Query: 238 IMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPI 297
IML LATHE +F+I+RE P + C VCGQ+GH EC G D A D +
Sbjct: 238 IMLGLATHEPNFTIIREEFK-PNKPRPCDVCGQLGHEMKECTGTTPD--ASLVRSDPSFG 294
Query: 298 HKKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIR 357
++ + F+ + VLREYL+ EL +PN PF +FER +DD+VF+CFFVGNDFLPH+P+LEIR
Sbjct: 295 NQDSFIFVRLTVLREYLEKELSMPNLPFKYDFERALDDWVFMCFFVGNDFLPHLPSLEIR 354
Query: 358 EGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYEY 417
EGA++ L+++Y++ G++TD+G+V LDRV+ + + ED+IF++R + + +++
Sbjct: 355 EGAVDRLVNLYKKCVYKTRGWITDSGDVNLDRVQVIMDELGRVEDEIFRRRHQNELSFKA 414
Query: 418 NEAMKL---------------------------NARRESSEELLQAPVAVA--------- 441
E K NAR+E++ L AVA
Sbjct: 415 REKNKKQQKINFELLEKTQFAPVKVGEESKTVENARKEAANIRLAGMQAVAEAEKEQRGQ 474
Query: 442 ---------------DTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWV 486
D V+L E G+KERYY KFE++ + + + V L+YV GLCWV
Sbjct: 475 KRSAEQAGLDDDDAHDEVRLWEEGFKERYYESKFEVAR--DNLEFRYRVALQYVRGLCWV 532
Query: 487 CRYYYQDVCSWQWFYPYHYAPFASDLKDLSDLEITFFLG-EPFRPFDQLMGTLPAASSSA 545
RYYYQ SW+W++PYHYAPFASD ++ L F G +PFRP +QLMG PAASS
Sbjct: 533 LRYYYQGCASWKWYFPYHYAPFASDFVNIQGLSTKFERGTQPFRPLEQLMGVFPAASSQH 592
Query: 546 LPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFL 605
+P + LM+DP SPI FYP DF+ID+NGK+FAWQGV LPF+DE L + + L
Sbjct: 593 VPRPWATLMSDPFSPIIDFYPTDFKIDLNGKKFAWQGVALLPFVDETRLFKALEPYYDDL 652
Query: 606 TEEE 609
T+ E
Sbjct: 653 TQAE 656
>gi|324502555|gb|ADY41124.1| 5'-3' exoribonuclease 2 [Ascaris suum]
Length = 934
Score = 608 bits (1569), Expect = e-171, Method: Compositional matrix adjust.
Identities = 349/767 (45%), Positives = 456/767 (59%), Gaps = 89/767 (11%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPAF+RWL+ +YP IV+ VEE P+ D +G PV ++PNPN EFDNLYLDMNGII
Sbjct: 1 MGVPAFFRWLSRKYPSVIVNAVEEKPR-DVDGNLIPVRTTEPNPNFQEFDNLYLDMNGII 59
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ +PAP S D++F IF+YID IF +VRPR+LLY+AIDGVAPRAKMNQQR+RRF
Sbjct: 60 HPCTHPENRPAPKSEDEMFALIFEYIDRIFAVVRPRRLLYMAIDGVAPRAKMNQQRSRRF 119
Query: 121 RAAKDAAEAEAEEERLRKEFEEAG-KLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFI 179
RA+K+AAE + +R+ E+ G L KE+ E DSN ITPGT FMA L+ AL+Y++
Sbjct: 120 RASKEAAEKLQQIAEVRERLEKEGFPLPPKKEEGEHFDSNCITPGTPFMARLADALRYYV 179
Query: 180 QARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIM 239
RLN PGW +VILSDAN PGEGEHKIM +IR QR P DPNT HCL G DADLIM
Sbjct: 180 HMRLNNDPGWANIEVILSDANAPGEGEHKIMDFIRRQRASPSHDPNTVHCLCGADADLIM 239
Query: 240 LSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIHK 299
L LATHE +F+I+RE +P QQ C +CGQ GH +C G D A+ D P+ K
Sbjct: 240 LGLATHEPNFNIIREEF-IPNQQRPCDLCGQYGHEVKDCQGLAQDEAAE---CDANPMQK 295
Query: 300 K-KYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIRE 358
+ + F+ + VLREYL+ EL + N P + ER +DD+VF+CFFVGNDFLPH+P+LEIRE
Sbjct: 296 ETNFIFVRLPVLREYLERELQMNNSSVPFDLERAIDDWVFMCFFVGNDFLPHLPSLEIRE 355
Query: 359 GAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYEYN 418
AI+ L+ +Y+ +GGYLT+ G+V +DRV+K + + ED+IF+ R Q+ ++
Sbjct: 356 NAIDRLIRLYKDMVAKVGGYLTNQGDVYMDRVQKILNGLGEVEDEIFKNRQ--QKELQFR 413
Query: 419 EAMKLNARRESSEEL---------LQAPVA-------VADTVKLGE-------------- 448
E K RRE + L AP A ADT +L
Sbjct: 414 ERNKAKRRRERAATTPAYIPVRGSLLAPQANGPVSFSGADTRRLARDARVQAMEYQNASS 473
Query: 449 -----------PGYKERYYADKFEISNPEE--IDKVK-------------------KDVV 476
G ++R K E S+ EE D+V+ D+
Sbjct: 474 KANTVVTTVQASGPRKR----KMEDSDSEEEVYDEVRLWETGWKERYYRSKFEVDGNDIA 529
Query: 477 LKY------VEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDLEITFFL-GEPFR 529
++ VEGLCWV +YYYQ SW W++PYHYAPFASD +S + F EPF+
Sbjct: 530 FRHKVAWAYVEGLCWVLKYYYQGCVSWNWYFPYHYAPFASDFDTISQFKPDFSAHTEPFK 589
Query: 530 PFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFI 589
P +QLM PAAS LPE +++LMT SPI FYP DFQ+D+NGK++AWQGV LPF+
Sbjct: 590 PLEQLMAVFPAASKKHLPESWQDLMTSEESPIIDFYPEDFQVDLNGKKYAWQGVALLPFV 649
Query: 590 DEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVHPQHPLYQQITLYCQLYHQLPPQDRFA 649
DE LL + L + E RNS D ++V +HP + + QLY P++
Sbjct: 650 DEHRLLETLATVYDKLDDFERERNSRGPDRIFVGRKHPFSKFLQ---QLYEGSCPENEGT 706
Query: 650 W-EIDVNASGGMNGYIWL---CERNGLRSIIPSPVKGLPDIERNQAM 692
ID + + G+ G + + R G R P P+ PDI N A+
Sbjct: 707 LIAIDPSFTNGLAGSVGVDSKVVRIGERYHSPIPLDCCPDIPSNSAI 753
>gi|256074378|ref|XP_002573502.1| 5'-3' exoribonuclease [Schistosoma mansoni]
gi|350644806|emb|CCD60472.1| 5'-3' exoribonuclease, putative [Schistosoma mansoni]
Length = 928
Score = 606 bits (1562), Expect = e-170, Method: Compositional matrix adjust.
Identities = 338/754 (44%), Positives = 453/754 (60%), Gaps = 73/754 (9%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQV-DGEGVARPVDVSKPNPNGMEFDNLYLDMNGI 59
MGVPAF+RWL+ +YP + VE+ + D +G PVD S+PNPNG EFDNLYLDMNGI
Sbjct: 1 MGVPAFFRWLSMKYPSIVTHCVEKRGSILDDDGNRSPVDTSEPNPNGEEFDNLYLDMNGI 60
Query: 60 IHPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRR 119
IHPC HP+ KPAP + ++F +IF+YID +F +VRPR++LY+AIDGVAPRAKMNQQR+RR
Sbjct: 61 IHPCTHPENKPAPKTESEMFAAIFEYIDRLFSIVRPRRVLYMAIDGVAPRAKMNQQRSRR 120
Query: 120 FRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFI 179
FRAA++A E + ERLR E G L K E DSN ITPGT FM+ L+ AL+ +I
Sbjct: 121 FRAAQEAKEKQITIERLRNELIARGAHLPPP-KEEHFDSNCITPGTPFMSRLAVALRGYI 179
Query: 180 QARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIM 239
RL + PGW+ V LSDANVPGEGEHKIM +IR QRN P D NT+HCL G DADLIM
Sbjct: 180 YTRLTKDPGWKNLMVFLSDANVPGEGEHKIMDFIRRQRNNPTHDANTKHCLCGADADLIM 239
Query: 240 LSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIHK 299
L LATHE +F+I+RE P Q + C +CGQ+GH +C G P + ++ G P
Sbjct: 240 LGLATHEPYFTIIREEFK-PNQPKPCDLCGQMGHEMEDCVGAPKEEDSN-EGPPPLPSGD 297
Query: 300 KKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREG 359
+ F+ + VLR+YL +L + F + ER++DD+VF+CFFVGNDFLPH+P+LEIREG
Sbjct: 298 VDFIFIRLNVLRQYLAEDLKLAGITFEWDLERVIDDWVFMCFFVGNDFLPHLPSLEIREG 357
Query: 360 AINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKR----------- 408
AI+ L+ +Y+ GG+LTD+G V L+RV+ + + ED+IF+ R
Sbjct: 358 AIDRLIDIYKSTVQKTGGWLTDSGRVNLERVQLIMVDLGKMEDEIFKNRRESELQFRNRK 417
Query: 409 ---------TRIQQAYE----------------YNEAMKLNAR----------RESSEEL 433
R Q+ + + E + L R R+ +E+
Sbjct: 418 RQNSSGNGYNRNQRGFAPQRLDHHPSFEVSQSGFMEPIPLKGRHGIAHPKGSHRDDEDEM 477
Query: 434 LQAPVAVADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQD 493
+ A AD V+ E G++ RYY KF + +P + V +Y GLCWV YYYQ
Sbjct: 478 MDA----ADEVRFWEDGWRSRYYQSKFGV-DPTDAPGFCIKVGQEYALGLCWVLAYYYQG 532
Query: 494 VCSWQWFYPYHYAPFASDLKDLSDLEITFFLGE--PFRPFDQLMGTLPAASSSALPEKYR 551
SW W++PYHYAPFASD +S+L++ F E PFRP +QLM PA S S +P ++
Sbjct: 533 CASWDWYFPYHYAPFASDFSKISELDVDFSKKETKPFRPLEQLMSVFPADSRSHVPPAWQ 592
Query: 552 NLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELF 611
+LMTDP SPI FYP DF+ID+NGKR+ W GV LPF+DE LL+ LT+EE+
Sbjct: 593 DLMTDPDSPIIDFYPTDFKIDLNGKRYLWMGVALLPFVDEVRLLKALDARRNLLTKEEVE 652
Query: 612 RNSVMLDLLYVHPQHP-------LYQQITLYCQL----YHQLPPQDRFAWEIDVNASGGM 660
RN D L+ HP LY+ T + H +P +A ID + G+
Sbjct: 653 RNVRGSDQLFCRADHPAGPLLHSLYKVSTEKAEKDDSEEHIIP---SWASAIDPRVTFGI 709
Query: 661 NGYIWLCERNGL-RSIIPSPVKG-LPDIERNQAM 692
+G IW + L S +PS V G +PD++ ++A+
Sbjct: 710 SGLIWPNKTTYLPGSRVPSAVPGHVPDLKVSEAV 743
>gi|414876882|tpg|DAA54013.1| TPA: hypothetical protein ZEAMMB73_402768 [Zea mays]
Length = 591
Score = 605 bits (1561), Expect = e-170, Method: Compositional matrix adjust.
Identities = 340/593 (57%), Positives = 399/593 (67%), Gaps = 96/593 (16%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPAFYRWLA++YP+ +VDVVEE+P PVD SKPNPN +EFDNLYLDMNGII
Sbjct: 1 MGVPAFYRWLAEKYPMVVVDVVEEEPVEIEGVKV-PVDTSKPNPNSLEFDNLYLDMNGII 59
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPCFHP+ +P+PT++ +VF+ +FDYID +F++VRPR+LLY+AIDGVAPRAKMNQQR+RRF
Sbjct: 60 HPCFHPEDRPSPTTFGEVFQCMFDYIDRLFVMVRPRRLLYMAIDGVAPRAKMNQQRSRRF 119
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQ 180
RAAKDAA+A AEEERLR+EFE G+ L K++ +TCDSNVITPGT+FMAVLS ALQY+I
Sbjct: 120 RAAKDAADAAAEEERLREEFEREGRKLPPKQQSQTCDSNVITPGTEFMAVLSVALQYYIH 179
Query: 181 ARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
RLN PGW+ KVILSDANVPGEGEHKIMSYIR QRNL GF+PNTRHCLYGLDADLIML
Sbjct: 180 RRLNYDPGWKQIKVILSDANVPGEGEHKIMSYIRGQRNLSGFNPNTRHCLYGLDADLIML 239
Query: 241 SLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIHKK 300
+LATHE+HFSILREV+ PGQQ+KCF+CGQVGHLAA C GK +++ + KK
Sbjct: 240 ALATHEVHFSILREVVYTPGQQDKCFLCGQVGHLAANCEGKVKRKAGEFDEKGGAIVPKK 299
Query: 301 KYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGA 360
YQFLNIW LREYL+YE +PNPPF I+FERIVDDF+F+CFFVGNDFLPHMPTLEIREGA
Sbjct: 300 PYQFLNIWTLREYLEYEFRMPNPPFKIDFERIVDDFIFMCFFVGNDFLPHMPTLEIREGA 359
Query: 361 INLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQA------ 414
INLLM VY++EF +MGGYLTD+ L RVE FIQ+V YED+IFQKR R+ Q
Sbjct: 360 INLLMAVYKKEFPSMGGYLTDSCTPDLSRVEHFIQAVGSYEDKIFQKRARLHQRQAERIK 419
Query: 415 ----------------------------------------YEYNEAMKLNARRE------ 428
YE N + K N R
Sbjct: 420 REKAQAKRGDDLDPHVRDDLIVPIQRFQGSRLASGAVPVPYEQNGSHKDNKERNSRARKA 479
Query: 429 -----SSEELLQAPVAVADTVKLGEPGYKE----------RYYADKFEISNPEEIDKVK- 472
S + A V + ++ E KE R +D F NPEE DKVK
Sbjct: 480 ARVSTSGSSIASALVEAENDLEAQECENKEELKSMLKDALREKSDIFNSDNPEE-DKVKL 538
Query: 473 --------------------------KDVVLKYVEGLCWVCRYYYQDVCSWQW 499
+DVVLKY EGLCWV YYY+ VCSWQW
Sbjct: 539 GEPGWRERYYEEKFGARTPEQIEEIRRDVVLKYTEGLCWVMHYYYEGVCSWQW 591
>gi|380025877|ref|XP_003696690.1| PREDICTED: 5'-3' exoribonuclease 2 homolog [Apis florea]
Length = 948
Score = 605 bits (1561), Expect = e-170, Method: Compositional matrix adjust.
Identities = 344/768 (44%), Positives = 458/768 (59%), Gaps = 93/768 (12%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPAF+RWL+ +YP IV+ +E+ P + G+ PV+ ++PNPNG+EFDNLYLDMNGII
Sbjct: 1 MGVPAFFRWLSRKYPSVIVECIEQKP-ITTNGIRVPVNSAEPNPNGIEFDNLYLDMNGII 59
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ +PAP + D++ ++IF+ ID +F +VRPRKLLY+AIDGVAPRAKMNQQR+RRF
Sbjct: 60 HPCTHPEDRPAPQNEDEMMEAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLS-AKEKPETCDSNVITPGTQFMAVLSAALQYFI 179
RA+K+A+E E +R+R E G L K K E DSN ITPGT FMA LS L Y+I
Sbjct: 120 RASKEASEKINEIKRIRSELSLKGASLPPEKPKEEHFDSNCITPGTPFMARLSKCLHYYI 179
Query: 180 QARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIM 239
RLN PGW+ KVILSDANVPGEGEHKIM +IR QR P DPNT+H L G DADLIM
Sbjct: 180 HDRLNNDPGWRNIKVILSDANVPGEGEHKIMDFIRRQRAQPDHDPNTQHVLCGADADLIM 239
Query: 240 LSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIHK 299
L LATHE +F+I+RE P + + C +CGQ+GH EC G + + N +
Sbjct: 240 LGLATHEPNFTIIREEFK-PNKPKPCDICGQLGHEMQECTGAEPNQREEANTFGS----E 294
Query: 300 KKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREG 359
+Y F+ + VLREYL+ EL +PN PF +FER++DD+VF+CFFVGNDFLPH+P+LEIREG
Sbjct: 295 CQYIFVRLNVLREYLERELQMPNLPFKYDFERVIDDWVFMCFFVGNDFLPHLPSLEIREG 354
Query: 360 AINLLMHVYRREFTAMGGY---------------LTDAGEVLLDRVEKFIQSVAVYEDQI 404
AI+ L+++Y++ GG+ +++ G+V + +K Q+ Y+ +
Sbjct: 355 AIDRLVNLYKKTVYKTGGFLTDSGDVNLDRVQLIMSELGDVEDEIFKKRQQNELAYKQRE 414
Query: 405 FQKRTRI--------------------------------QQAYE-------YNEAMKLNA 425
K+ R+ +AY+ Y+ K NA
Sbjct: 415 KDKKRRLLGISNNKPKWIPTGQFAPMRIGEHIKPVQNARYEAYQMRVHGQNYHTNEKGNA 474
Query: 426 R----------------RESSEELLQAPVAVADT---VKLGEPGYKERYYADKFEISNPE 466
+ R+ E+L+ + V+L E G+K+RYY KF++S P+
Sbjct: 475 KEMLESMIRPENSTDHERKRKSEVLEDDSDDDQSHDEVRLWEDGFKDRYYESKFDVS-PD 533
Query: 467 EIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDLEITFFLGE 526
+ + +V L+YV GLCWV RYYYQ SW+W++PYHYAPFASD ++ L F G
Sbjct: 534 NL-AFRNNVALQYVRGLCWVLRYYYQGCASWKWYFPYHYAPFASDFINIGGLSTEFEKGT 592
Query: 527 -PFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVK 585
PFRP +QLMG PAASS +P + LM+DP SPI FYP DF+ID+NGK+FAWQGV
Sbjct: 593 IPFRPLEQLMGVFPAASSKHVPAPWAKLMSDPKSPIIDFYPEDFKIDLNGKKFAWQGVAL 652
Query: 586 LPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVHPQHPLYQQIT-LYCQLYHQLPP 644
LPF+DEK L + + LTE E RN D LYV + Y + LY
Sbjct: 653 LPFVDEKRLFKALEPYYDCLTEAEKIRNVRGDDRLYVGLGNSGYNFMKGLYTN------- 705
Query: 645 QDRFAWEIDVNASGGMNGYIWLCERN-GLRSIIPSPVKGLPDIERNQA 691
R E + GM G + L E G + +PSP+ GL I N+
Sbjct: 706 HVRSDAETSI-CIDGMRGTVLLTEDCVGDGATLPSPINGLLPIRNNKV 752
>gi|198426685|ref|XP_002129696.1| PREDICTED: similar to 5-3 exoribonuclease 2 [Ciona intestinalis]
Length = 886
Score = 603 bits (1556), Expect = e-170, Method: Compositional matrix adjust.
Identities = 338/754 (44%), Positives = 440/754 (58%), Gaps = 81/754 (10%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPAF+RWL+ +Y SIV E+ + +GV PVD S PNPN +EFDNLYLDMNGII
Sbjct: 1 MGVPAFFRWLSRKYS-SIVIHCNEEKAKEIDGVTIPVDTSLPNPNDIEFDNLYLDMNGII 59
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ +PAP + ++ +IFD ID +F +VRPR++LY+AIDGVAPRAKMNQQR+RRF
Sbjct: 60 HPCSHPEDRPAPKNEQEIMIAIFDSIDRLFSIVRPRRVLYMAIDGVAPRAKMNQQRSRRF 119
Query: 121 RAAKDAAEAEAEEERLRKEFEEAG-KLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFI 179
RA+K+ E + +R E G +L K E DSN ITPGT+FM L+A L+++I
Sbjct: 120 RASKEGVEQTELKASIRAELLRNGMRLPEVDPKAERFDSNCITPGTEFMFRLAACLRFYI 179
Query: 180 QARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIM 239
RLN PGW+ +VILSDANVPGEGEHKIM +IR QR P DPNT HC+ G DADLIM
Sbjct: 180 IDRLNNDPGWRNIEVILSDANVPGEGEHKIMDFIRKQRGQPDHDPNTHHCICGADADLIM 239
Query: 240 LSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIHK 299
L LATHE +F+I+RE P Q C +C Q GH +C G P D + N V P
Sbjct: 240 LGLATHEPNFTIIREEFK-PNQPRPCGICAQYGHEMTDCCGLPRDQSDELNVVQSQPHAG 298
Query: 300 KKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREG 359
Y F+ I V+REY++ E+++P PF +FE I+DD+V +CFFVGNDFLPH+P+LEIREG
Sbjct: 299 TNYIFIRICVIREYIKLEMEMPGLPFKYDFENIIDDWVMMCFFVGNDFLPHLPSLEIREG 358
Query: 360 AINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQK------------ 407
AI+ L+ +Y+ GGYLT G+V L RVEK + + ED+IF+K
Sbjct: 359 AIDKLVRLYKDIVHQTGGYLTCNGKVNLSRVEKIMMGIGKLEDEIFRKRRESDVNYRARE 418
Query: 408 -----RTRIQQAYEY---------------------------------------NEAMKL 423
RT+ Q Y + A L
Sbjct: 419 KAKRQRTKRDQGPSYIPGSQFAPTPLGSGFESPNPLTNVKQSILEMRSKDLKNLDAAASL 478
Query: 424 NARRESSEELLQAPVAVAD-------------TVKLGEPGYKERYYADKFEISNPEEIDK 470
A S QA + A V+L E G+KERY+ KF +S + +
Sbjct: 479 RAMLSKSSTSTQAESSAAKRKKEDNDDDEPDDDVRLWEDGWKERYFRAKFNVSMKDF--E 536
Query: 471 VKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDLEITFFLG-EPFR 529
++ +V YVEGLCWV YYYQ SW+WF+P+HYAPFASD D+SDL F +P R
Sbjct: 537 FRRTLVRCYVEGLCWVLLYYYQGCASWKWFFPFHYAPFASDFFDISDLPNEFPTNTQPKR 596
Query: 530 PFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFI 589
P +QLM P AS LP +R LM DP SPI FYP DF+ID+NGK++AWQGV LPF+
Sbjct: 597 PLEQLMCVFPEASGQFLPTTWRKLMGDPESPIIDFYPEDFKIDLNGKKYAWQGVALLPFV 656
Query: 590 DEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVHPQHPLYQQITLYCQLYHQLPPQDRF- 648
DE ++ ++ LT +E RNS D L+V HPL+ L LY P +
Sbjct: 657 DEDRMMSSLTRVYDDLTPQEEKRNSRGNDYLFVGVHHPLH---ALLKGLYEGGTPPMSYD 713
Query: 649 -AWEIDVNASGGMNGYIWLCERNGL-RSIIPSPV 680
A +ID + GM G +W E + ++++ +PV
Sbjct: 714 EAADIDPGLAHGMAGKVWNDEHCKVGQTVVHAPV 747
>gi|307204797|gb|EFN83355.1| 5'-3' exoribonuclease 2-like protein [Harpegnathos saltator]
Length = 880
Score = 602 bits (1551), Expect = e-169, Method: Compositional matrix adjust.
Identities = 344/765 (44%), Positives = 444/765 (58%), Gaps = 99/765 (12%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPAF+RWL+ +YP IV+ +E+ P V+ +GV PV+ + PNPNG+EFDNLYLDMNGII
Sbjct: 1 MGVPAFFRWLSRKYPSVIVECIEQKP-VNADGVCIPVNSADPNPNGVEFDNLYLDMNGII 59
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ KPAP D++ ++IF+ ID +F +VRPRKLLY+AIDGVAPRAKMNQQR+RRF
Sbjct: 60 HPCTHPEDKPAPKDEDEMMEAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETC--DSNVITPGTQFMAVLSAALQYF 178
RA+K+ E E +R+R E G L EKP+ DSN ITPGT FM+ LSA L Y+
Sbjct: 120 RASKETTEKIDEIQRIRTELSLKGASLPP-EKPKEAHFDSNCITPGTPFMSRLSACLHYY 178
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
I RLN PGW+ K+ILSDANVPGEGEHKIM +IR QR+ P DPNT+H L G DADLI
Sbjct: 179 IHERLNNDPGWRNIKIILSDANVPGEGEHKIMDFIRRQRSQPDHDPNTQHVLCGADADLI 238
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
ML LATHE +F+I+RE P + + C +CGQ+GH +C G + + N
Sbjct: 239 MLGLATHEPNFTIIREEFK-PNKPKPCDICGQLGHEMRDCTGAEPNQKEEENAYGS---- 293
Query: 299 KKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIRE 358
+ ++ F+ + VLREYL+ EL +PN PF +FER VDD+VF+CFFVGNDFLPH+P+LEIRE
Sbjct: 294 ECQFIFVRLNVLREYLERELSMPNLPFKYDFERAVDDWVFMCFFVGNDFLPHLPSLEIRE 353
Query: 359 GAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYEYN 418
GAI+ L+ +Y++ GG+LTD+G+V LDRV+ + + ED+IF+KR + A++
Sbjct: 354 GAIDRLVTLYKKAVYKTGGFLTDSGDVNLDRVQLIMSDLGDVEDEIFKKRQENELAFKQR 413
Query: 419 EAMKLNARRESSEELLQ---------APVAVADTVKLGEPGYKERY-------------- 455
E K RR + AP A+ VK E E Y
Sbjct: 414 EKDK--KRRHEIISNFKPKWIPAGQFAPTALGQAVKPIENARYEAYQMRVQGRNYNTNVA 471
Query: 456 ----------------------YADKFEISNPEEIDKVKKDVVLKYVEGL---------- 483
K E +PE D+ D V + +G
Sbjct: 472 ENKNANHALESMLRPENTSNKGQKRKIESVDPESDDEQAHDEVRLWEDGFKDRYYESKFG 531
Query: 484 --------------------CWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDLEITFF 523
CWV RYYYQ SW+W++PYHYAPFASD ++ L F
Sbjct: 532 VSPDNLAFRNNVALQYVQGLCWVLRYYYQGCASWRWYFPYHYAPFASDFINIGGLSTEFE 591
Query: 524 LGE-PFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQG 582
G PFRP +QLM PAASS +P + LM+DP S I FYP DF+ID+NGK+FAWQG
Sbjct: 592 KGTIPFRPLEQLMAVFPAASSKHVPVPWAKLMSDPRSSIIDFYPEDFKIDLNGKKFAWQG 651
Query: 583 VVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVHPQHPLYQQITLYCQLYHQL 642
V LPF+DE+ L + LTE E RN D LYV + T Y +
Sbjct: 652 VALLPFVDEQRLFKALASYYDSLTEAEKKRNVRGDDRLYVGMGN------TGYNYIKKTY 705
Query: 643 PPQDRFAWEIDVNASGGMNGYIWL---CERNGLRSIIPSPVKGLP 684
+ F E+D+ GM G I+L C G +PSPV+GLP
Sbjct: 706 IDRVEFDKELDIRID-GMRGTIFLSEDCVSEG--GTLPSPVRGLP 747
>gi|302142638|emb|CBI19841.3| unnamed protein product [Vitis vinifera]
Length = 870
Score = 601 bits (1550), Expect = e-169, Method: Compositional matrix adjust.
Identities = 301/429 (70%), Positives = 362/429 (84%), Gaps = 3/429 (0%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPAFYRWLA++YPL +VDV+EE+P V+ +G++ PVD SKPNPN +E+DNLYLDMNGII
Sbjct: 1 MGVPAFYRWLAEKYPLVVVDVIEEEP-VEIDGISIPVDTSKPNPNNIEYDNLYLDMNGII 59
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPCFHP+ +P+PT++D+VF+ +FDYID +F++VRPRKLLY+AIDGVAPRAKMNQQR+RRF
Sbjct: 60 HPCFHPEDRPSPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQ 180
RAAKDAA+A AEEERLR+EFE+ G+ L K++ + CDSNVITPGT+FM VLS ALQY+I
Sbjct: 120 RAAKDAADAAAEEERLREEFEKEGRKLPPKQQSQVCDSNVITPGTEFMGVLSVALQYYIH 179
Query: 181 ARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
RLN PGW+ KVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML
Sbjct: 180 LRLNNDPGWKSIKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 239
Query: 241 SLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDT-PIHK 299
+LATHE+HFSILRE++ PGQQ+KCF+CGQ+GHLAA+C GK +++ + + K
Sbjct: 240 ALATHEVHFSILREIVFTPGQQDKCFMCGQMGHLAADCEGKAKRKAGEFDEKGQSASVVK 299
Query: 300 KKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREG 359
K YQFLNIW LREYL+YE+ IPN PF I+FE IVDDF+F+CFFVGNDFLPHMPTLEIREG
Sbjct: 300 KPYQFLNIWTLREYLEYEMRIPNLPFEIDFEHIVDDFIFMCFFVGNDFLPHMPTLEIREG 359
Query: 360 AINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRI-QQAYEYN 418
AINLLM VY++E AMGGYLTD+ + L VE FIQ+V YED+IFQKR R+ Q+ E
Sbjct: 360 AINLLMAVYKKELRAMGGYLTDSSKPNLSNVEHFIQAVGSYEDKIFQKRARLHQRQAERI 419
Query: 419 EAMKLNARR 427
+ K ARR
Sbjct: 420 KREKAQARR 428
Score = 308 bits (790), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 155/268 (57%), Positives = 184/268 (68%), Gaps = 3/268 (1%)
Query: 427 RESSEELLQAPVAVADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWV 486
RE S+ L + D VKLGE G+KERYY +KF PEE + ++ DVVLKY EGLCWV
Sbjct: 521 REKSD-LFNSKNPEEDKVKLGEAGWKERYYEEKFSTKTPEEQEAMRNDVVLKYTEGLCWV 579
Query: 487 CRYYYQDVCSWQWFYPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSAL 546
YYY+ VCSWQWFYPYHYAPFASDLKDL L I+F LG PF+PF+QL+G PAASS AL
Sbjct: 580 MHYYYEGVCSWQWFYPYHYAPFASDLKDLGQLNISFELGSPFKPFNQLLGVFPAASSHAL 639
Query: 547 PEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLT 606
PE+YR LMTDP+SPI FYP DF++DMNGKRFAWQG+ KLPFIDE LL + +K+E LT
Sbjct: 640 PEEYRKLMTDPNSPIIDFYPTDFEVDMNGKRFAWQGIAKLPFIDEARLLAEVQKIEHTLT 699
Query: 607 EEELFRNSVMLDLLYVHPQHPLYQQITLYCQLYHQLPPQDR--FAWEIDVNASGGMNGYI 664
EEE RNSVM D+L+V HPL I +L +R ++D ASGGMNGYI
Sbjct: 700 EEEFRRNSVMFDMLFVALSHPLSPYIFSLDDRCKKLTDNERTEVKEQLDPRASGGMNGYI 759
Query: 665 WLCERNGLRSIIPSPVKGLPDIERNQAM 692
LC + I SP+ L DI NQ +
Sbjct: 760 SLCGGDPCPPIFRSPIASLEDIMDNQVI 787
>gi|392884414|gb|AFM91039.1| 5'-3' exoribonuclease 2 [Callorhinchus milii]
Length = 952
Score = 600 bits (1546), Expect = e-168, Method: Compositional matrix adjust.
Identities = 335/759 (44%), Positives = 452/759 (59%), Gaps = 80/759 (10%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPAF+RWL+ +YP +V +EE + + GV PVD SKPNPN +EFDNLYLDMNGII
Sbjct: 1 MGVPAFFRWLSRKYPSIVVHCLEERVK-EVNGVKIPVDTSKPNPNEVEFDNLYLDMNGII 59
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ K AP + D++ +IF+YID +F ++RPR+LLY+AIDGVAPRAKMNQQR RRF
Sbjct: 60 HPCTHPENKAAPKNEDEMMVAIFEYIDRLFNILRPRRLLYMAIDGVAPRAKMNQQRPRRF 119
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQ 180
RA+K+ E AE+ R+R+E G LS + E D N ITPGT+FM L+ +L+Y++
Sbjct: 120 RASKEGVELLAEKTRMREEVISKGGFLSEEVIKERFDGNCITPGTEFMDNLARSLRYYVA 179
Query: 181 ARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
RLN PGW+ VILSDA+VPGEGEHKIM +IR QR P DPNT HCL G DADLIML
Sbjct: 180 DRLNNDPGWKNLTVILSDASVPGEGEHKIMDFIRRQRAQPNHDPNTHHCLCGADADLIML 239
Query: 241 SLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWN--GVDDTPIH 298
LATHE +F+I+RE P Q C +CGQ+GH EC G P D ++ + +
Sbjct: 240 GLATHEPNFTIIREEFK-PNQPRPCALCGQIGHEIKECQGLPKDKQGQFDQFAGNSAGVE 298
Query: 299 KKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIRE 358
++++ F+ + VLREYL+ EL + + PF +FER VDD+VF+CFFVGNDFLPH+P+LEIRE
Sbjct: 299 EQEFIFIRLTVLREYLERELTMASLPFTFDFERSVDDWVFMCFFVGNDFLPHLPSLEIRE 358
Query: 359 GAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTR-----IQQ 413
GAI+ L+ +Y+ GGYLT+ G V L+RV+ + +V ED IF+KR Q+
Sbjct: 359 GAIDRLVGIYKNVVHKTGGYLTENGFVNLERVQLIMIAVGEAEDNIFKKRREDDVLFRQR 418
Query: 414 AYEYNEAMKLN-----------------------------------------------AR 426
E N+ +K N A
Sbjct: 419 QKEKNKRLKGNRPSFIPGGQYSPQALGQSSGGGRPQAIQNPRQTAFEMRVKDRDPQNRAS 478
Query: 427 RESSEELLQAPVAVA------DTVKLGEPGYKERYYADKFE---ISNPEEIDKVKKDVVL 477
++S +PV + D+ + EP R + + ++ N ++D
Sbjct: 479 SQNSANSDGSPVPLGTKRKNEDSDEEQEPSDNIRLWEEGWKQRYYKNKFDVDATDAKFRR 538
Query: 478 KYVE----GLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDLEITFFLG-EPFRPFD 532
K VE GLCWV +YYYQ SW+WF+P+HYAPFASD D+ +L TF G +PF+P +
Sbjct: 539 KVVEAYVEGLCWVLQYYYQGCASWKWFFPFHYAPFASDFTDIKELPTTFEKGTKPFKPLE 598
Query: 533 QLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEK 592
QLMG PAAS + LPE +R LM+ P+S I FYP DF +D+NGK+FAWQGV LPF+DE+
Sbjct: 599 QLMGVFPAASGNFLPETWRYLMSYPNSSIIDFYPDDFALDLNGKKFAWQGVALLPFVDER 658
Query: 593 LLLRQTKKLEVFLTEEELFRNSVMLDLLYVHPQHPLYQQITLYCQLYHQLPPQDRFAWEI 652
L +K+ LT +E RNS+ D+L+V H L+ I ++ D ++
Sbjct: 659 RLRGALEKVYPDLTSDETRRNSLGSDILFVANSHKLFDFIV-------EMQKNDSQELQL 711
Query: 653 DVNASGGMNGYIWLCERNGLR--SIIPSPVKGLPDIERN 689
G+ G + E + ++ I+ SPV L DI N
Sbjct: 712 PPELCHGIGGLL-TSESDAVKPGQIVVSPVPTLKDINEN 749
>gi|359492219|ref|XP_002280236.2| PREDICTED: 5'-3' exoribonuclease 3-like [Vitis vinifera]
Length = 1065
Score = 599 bits (1545), Expect = e-168, Method: Compositional matrix adjust.
Identities = 301/429 (70%), Positives = 362/429 (84%), Gaps = 3/429 (0%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPAFYRWLA++YPL +VDV+EE+P V+ +G++ PVD SKPNPN +E+DNLYLDMNGII
Sbjct: 1 MGVPAFYRWLAEKYPLVVVDVIEEEP-VEIDGISIPVDTSKPNPNNIEYDNLYLDMNGII 59
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPCFHP+ +P+PT++D+VF+ +FDYID +F++VRPRKLLY+AIDGVAPRAKMNQQR+RRF
Sbjct: 60 HPCFHPEDRPSPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQ 180
RAAKDAA+A AEEERLR+EFE+ G+ L K++ + CDSNVITPGT+FM VLS ALQY+I
Sbjct: 120 RAAKDAADAAAEEERLREEFEKEGRKLPPKQQSQVCDSNVITPGTEFMGVLSVALQYYIH 179
Query: 181 ARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
RLN PGW+ KVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML
Sbjct: 180 LRLNNDPGWKSIKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 239
Query: 241 SLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDT-PIHK 299
+LATHE+HFSILRE++ PGQQ+KCF+CGQ+GHLAA+C GK +++ + + K
Sbjct: 240 ALATHEVHFSILREIVFTPGQQDKCFMCGQMGHLAADCEGKAKRKAGEFDEKGQSASVVK 299
Query: 300 KKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREG 359
K YQFLNIW LREYL+YE+ IPN PF I+FE IVDDF+F+CFFVGNDFLPHMPTLEIREG
Sbjct: 300 KPYQFLNIWTLREYLEYEMRIPNLPFEIDFEHIVDDFIFMCFFVGNDFLPHMPTLEIREG 359
Query: 360 AINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRI-QQAYEYN 418
AINLLM VY++E AMGGYLTD+ + L VE FIQ+V YED+IFQKR R+ Q+ E
Sbjct: 360 AINLLMAVYKKELRAMGGYLTDSSKPNLSNVEHFIQAVGSYEDKIFQKRARLHQRQAERI 419
Query: 419 EAMKLNARR 427
+ K ARR
Sbjct: 420 KREKAQARR 428
Score = 308 bits (789), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 155/268 (57%), Positives = 184/268 (68%), Gaps = 3/268 (1%)
Query: 427 RESSEELLQAPVAVADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWV 486
RE S+ L + D VKLGE G+KERYY +KF PEE + ++ DVVLKY EGLCWV
Sbjct: 521 REKSD-LFNSKNPEEDKVKLGEAGWKERYYEEKFSTKTPEEQEAMRNDVVLKYTEGLCWV 579
Query: 487 CRYYYQDVCSWQWFYPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSAL 546
YYY+ VCSWQWFYPYHYAPFASDLKDL L I+F LG PF+PF+QL+G PAASS AL
Sbjct: 580 MHYYYEGVCSWQWFYPYHYAPFASDLKDLGQLNISFELGSPFKPFNQLLGVFPAASSHAL 639
Query: 547 PEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLT 606
PE+YR LMTDP+SPI FYP DF++DMNGKRFAWQG+ KLPFIDE LL + +K+E LT
Sbjct: 640 PEEYRKLMTDPNSPIIDFYPTDFEVDMNGKRFAWQGIAKLPFIDEARLLAEVQKIEHTLT 699
Query: 607 EEELFRNSVMLDLLYVHPQHPLYQQITLYCQLYHQLPPQDR--FAWEIDVNASGGMNGYI 664
EEE RNSVM D+L+V HPL I +L +R ++D ASGGMNGYI
Sbjct: 700 EEEFRRNSVMFDMLFVALSHPLSPYIFSLDDRCKKLTDNERTEVKEQLDPRASGGMNGYI 759
Query: 665 WLCERNGLRSIIPSPVKGLPDIERNQAM 692
LC + I SP+ L DI NQ +
Sbjct: 760 SLCGGDPCPPIFRSPIASLEDIMDNQVI 787
>gi|224082986|ref|XP_002306919.1| predicted protein [Populus trichocarpa]
gi|222856368|gb|EEE93915.1| predicted protein [Populus trichocarpa]
Length = 998
Score = 599 bits (1544), Expect = e-168, Method: Compositional matrix adjust.
Identities = 302/429 (70%), Positives = 356/429 (82%), Gaps = 3/429 (0%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPAFYRWLA++YPL +VDV+EE+P V EGV PVD SKPNPN +E+DNLYLDMNGII
Sbjct: 1 MGVPAFYRWLAEKYPLVVVDVIEEEPVVI-EGVKIPVDTSKPNPNNIEYDNLYLDMNGII 59
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPCFHP+ +P+PTS+ +VF+ +FDYID +F++VRPRKLLY+AIDGVAPRAKMNQQR+RRF
Sbjct: 60 HPCFHPEDRPSPTSFGEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQ 180
RAAKDA++A AEEERLR+EFE G+ L KE +T DSNVITPGT+FMAVLS ALQY+I
Sbjct: 120 RAAKDASDAAAEEERLREEFEREGRKLPPKETSQTFDSNVITPGTEFMAVLSIALQYYIH 179
Query: 181 ARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
RLN PGW+ KV+LSDANVPGEGEHK+MSYIRLQRNLPG+DPNTRHCLYGLDADLIML
Sbjct: 180 LRLNYDPGWKKIKVVLSDANVPGEGEHKVMSYIRLQRNLPGYDPNTRHCLYGLDADLIML 239
Query: 241 SLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWN-GVDDTPIHK 299
+LATHE+HFSILRE++ PGQQ+KCF+CGQ GHLAA C GK +++ +D + K
Sbjct: 240 ALATHEVHFSILREIVFTPGQQDKCFICGQAGHLAAACEGKAKRKAGEFDEKGNDVAVPK 299
Query: 300 KKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREG 359
K YQFLNIW LREYL+YE IPNPPF I+ ER VDDF+F+CFFVGNDFLPHMPTLEIREG
Sbjct: 300 KPYQFLNIWTLREYLEYEFRIPNPPFEIDLERTVDDFIFICFFVGNDFLPHMPTLEIREG 359
Query: 360 AINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRI-QQAYEYN 418
AINLLM VY++EF +GGYLTD + L RVE FIQ+V YED+IFQKR R+ Q+ E
Sbjct: 360 AINLLMAVYKKEFRVLGGYLTDGSKPNLSRVEHFIQAVGAYEDKIFQKRARLHQRQAERI 419
Query: 419 EAMKLNARR 427
+ K ARR
Sbjct: 420 KREKTQARR 428
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 152/285 (53%), Positives = 194/285 (68%), Gaps = 6/285 (2%)
Query: 413 QAYEYNEAMKLNAR---RESSEELLQAPVAVADTVKLGEPGYKERYYADKFEISNPEEID 469
+A+E E +K + RE S+ + + D VKLGEPG+KERYY +KF + +E++
Sbjct: 506 EAHENKEELKTKLKESLREKSD-VFNSKNHEEDKVKLGEPGWKERYYEEKFSAKSLDEME 564
Query: 470 KVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDLEITFFLGEPFR 529
V++DVVL+Y EGLCWV YYY+ VCSWQWFYPYHYAPFASDL DL L I+F LG PF+
Sbjct: 565 AVRRDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLTDLGQLNISFELGSPFK 624
Query: 530 PFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFI 589
PF+QL+G PAASS ALP YR LMTDP+SPI+ FYP DF++DMNGKRFAWQG+ KLPFI
Sbjct: 625 PFNQLLGVFPAASSHALPVHYRKLMTDPNSPIFDFYPTDFEVDMNGKRFAWQGIAKLPFI 684
Query: 590 DEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVHPQHPLYQQITLYCQLYHQLPPQDRFA 649
DE LL + +K+E LTEEE RNS+M D+L+V HPL + I L QL ++R
Sbjct: 685 DEARLLAEVQKIEHTLTEEEARRNSMMFDMLFVSSSHPLSESIYLLDNHCKQLTDKERVE 744
Query: 650 WEIDVNA--SGGMNGYIWLCERNGLRSIIPSPVKGLPDIERNQAM 692
+ +N S GMNGY+ C + I SPV G+ DI N+ +
Sbjct: 745 VKERINPELSDGMNGYLSPCAGDTHPPIFRSPVVGMEDILANEVI 789
>gi|356562399|ref|XP_003549459.1| PREDICTED: 5'-3' exoribonuclease 3-like [Glycine max]
Length = 1065
Score = 598 bits (1542), Expect = e-168, Method: Compositional matrix adjust.
Identities = 295/433 (68%), Positives = 353/433 (81%), Gaps = 3/433 (0%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPAFYRWLA++YP+ IVD +EE+ V +GV PVD S NPN +E+DNLYLDMNGII
Sbjct: 1 MGVPAFYRWLAEKYPMVIVDAIEEEAVVI-DGVQIPVDTSNKNPNNIEYDNLYLDMNGII 59
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPCFHP+ +P+PTS+D+VF+ +FDYID +F++VRPRKLLY+AIDGVAPRAKMNQQR+RRF
Sbjct: 60 HPCFHPEDRPSPTSFDEVFECMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQ 180
RAAKDAA+A AEE RLR+EFE+ G+ L K + +T DSNVITPGT+FMAVLS ALQY++
Sbjct: 120 RAAKDAADAAAEETRLREEFEKEGRKLPPKGESQTFDSNVITPGTEFMAVLSIALQYYVH 179
Query: 181 ARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
RLN PGWQ KVILSDANVPGEGEHKIMSYIRLQRNL G+DPNTRHCLYGLDADLIML
Sbjct: 180 LRLNNDPGWQNIKVILSDANVPGEGEHKIMSYIRLQRNLKGYDPNTRHCLYGLDADLIML 239
Query: 241 SLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIHKK 300
+LATHEIHFSILREV+ PG Q+KCF+CGQ+GH+AA C GK +++ + + KK
Sbjct: 240 ALATHEIHFSILREVVFTPG-QDKCFLCGQMGHMAANCEGKAKRKAGEFDEKGEAIVAKK 298
Query: 301 KYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGA 360
+QFLNIW LREYL+YE+ IPNPPF I+FE IVDDF+F+CFFVGNDFLPHMPTLEIREGA
Sbjct: 299 PFQFLNIWTLREYLEYEMRIPNPPFEIDFECIVDDFIFMCFFVGNDFLPHMPTLEIREGA 358
Query: 361 INLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRI-QQAYEYNE 419
INLL+ VY++EF GGYLT+ + L +VE FIQ+V YED+IFQKR R+ Q+ E +
Sbjct: 359 INLLIAVYKKEFREFGGYLTNGSTINLSKVEHFIQAVGSYEDKIFQKRARLHQRQTERIK 418
Query: 420 AMKLNARRESSEE 432
K ARR E
Sbjct: 419 REKAQARRGDDAE 431
Score = 308 bits (790), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 151/268 (56%), Positives = 185/268 (69%), Gaps = 3/268 (1%)
Query: 427 RESSEELLQAPVAVADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWV 486
RE S+ + + A D +KLGEPG+KERYY +KF PEE++ ++KDVVLKY EGLCWV
Sbjct: 527 REKSD-VFNSKNAEEDKIKLGEPGWKERYYDEKFSAKTPEELEAIRKDVVLKYTEGLCWV 585
Query: 487 CRYYYQDVCSWQWFYPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSAL 546
YYY+ VCSW WFYPYHYAPFASDLK L +L+I+F LG PF+P+DQL+G PAASS AL
Sbjct: 586 MHYYYEGVCSWNWFYPYHYAPFASDLKGLGELDISFKLGTPFKPYDQLLGVFPAASSHAL 645
Query: 547 PEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLT 606
PE YR LMTDPSSPI FYP DF++DMNGKRFAWQG+ KLPFIDE LL + +K+E LT
Sbjct: 646 PEPYRRLMTDPSSPIIDFYPVDFEVDMNGKRFAWQGIAKLPFIDEVRLLAEVQKIENLLT 705
Query: 607 EEELFRNSVMLDLLYVHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVN--ASGGMNGYI 664
EE RN++M DLL+V+ HPL I+ +P +R + +N SGGMNGYI
Sbjct: 706 PEEKRRNAIMFDLLFVNSCHPLSACISTLDNKCKNMPNSERAVVKEKINPKESGGMNGYI 765
Query: 665 WLCERNGLRSIIPSPVKGLPDIERNQAM 692
LC I SPV + DI N +
Sbjct: 766 SLCGGEPCPPIFRSPVASMEDIMDNHVI 793
>gi|356553393|ref|XP_003545041.1| PREDICTED: 5'-3' exoribonuclease 3-like [Glycine max]
Length = 1075
Score = 592 bits (1527), Expect = e-166, Method: Compositional matrix adjust.
Identities = 293/433 (67%), Positives = 354/433 (81%), Gaps = 3/433 (0%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPAFYRWLA++YP+ IVD +EE+P V +GV PVD SK NPN +E+DNLYLDMNGII
Sbjct: 1 MGVPAFYRWLAEKYPMVIVDAIEEEPVVI-DGVQIPVDTSKKNPNNIEYDNLYLDMNGII 59
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPCFHP+ +P+PTS+D+VF+ +FDYID +F++VRPR+LLY+AIDGVAPRAKMNQQR+RRF
Sbjct: 60 HPCFHPEDRPSPTSFDEVFECMFDYIDRLFIMVRPRELLYMAIDGVAPRAKMNQQRSRRF 119
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQ 180
RAAKDAA+A AEE RLR+EFE+ G+ L +K + +T DSNVITPGT+FMAVLS ALQY++
Sbjct: 120 RAAKDAADAAAEEARLREEFEKEGRKLPSKGESQTFDSNVITPGTEFMAVLSIALQYYVH 179
Query: 181 ARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
RLN PGWQ KVILSDANVPGEGEHKIMSYIRLQRNL G+DPNTRHCLYGLDADLIML
Sbjct: 180 LRLNNDPGWQNIKVILSDANVPGEGEHKIMSYIRLQRNLKGYDPNTRHCLYGLDADLIML 239
Query: 241 SLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIHKK 300
+LATHEIHFSILRE++ PG Q+KCF+CGQ+GH+AA C GK +++ + + KK
Sbjct: 240 ALATHEIHFSILREIVFTPG-QDKCFLCGQMGHMAANCEGKAKRKAGEFDEKGEAIVTKK 298
Query: 301 KYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGA 360
+QFLNIW LREYL+YE+ I NPP I+F+ IVDDF+F+CFFVGNDFLPHMPTLEIREGA
Sbjct: 299 PFQFLNIWTLREYLEYEMRISNPPSEIDFDCIVDDFIFMCFFVGNDFLPHMPTLEIREGA 358
Query: 361 INLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRI-QQAYEYNE 419
INLL+ VY++EF GGYLT+ + L RVE FIQ+V YED+IFQKR R+ Q+ E +
Sbjct: 359 INLLIAVYKKEFREFGGYLTNGSTINLSRVEHFIQAVGSYEDKIFQKRARLHQRQTERIK 418
Query: 420 AMKLNARRESSEE 432
K ARR E
Sbjct: 419 REKAQARRGDDAE 431
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 148/268 (55%), Positives = 185/268 (69%), Gaps = 3/268 (1%)
Query: 427 RESSEELLQAPVAVADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWV 486
RE S+ + + A D +KLGEPG+KERYY +KF PEE++ ++KDVVLKY EGLCWV
Sbjct: 527 REKSD-VFNSKNAEEDKIKLGEPGWKERYYEEKFSAKTPEELEAIRKDVVLKYTEGLCWV 585
Query: 487 CRYYYQDVCSWQWFYPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSAL 546
YYY+ VCSW WFYPYHYAPFASDLK L +L+I+F LG PF+PFDQL+G PAASS AL
Sbjct: 586 MHYYYEGVCSWNWFYPYHYAPFASDLKGLGELDISFKLGTPFKPFDQLLGVFPAASSHAL 645
Query: 547 PEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLT 606
PE YR LMTDP+SPI FYP DF++DMNGKRFAWQG+ KLPFIDE LL + +K+E LT
Sbjct: 646 PEPYRRLMTDPNSPIIDFYPIDFEVDMNGKRFAWQGIAKLPFIDEVRLLAEVQKIENLLT 705
Query: 607 EEELFRNSVMLDLLYVHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVN--ASGGMNGYI 664
+E RN++M DL++V+ HPL I+ +P +R + +N SGGMNGYI
Sbjct: 706 PDEKRRNAIMFDLIFVNSCHPLSACISTLDNKCKNMPNSERAVVKEKINPKESGGMNGYI 765
Query: 665 WLCERNGLRSIIPSPVKGLPDIERNQAM 692
LC I SP+ + DI N +
Sbjct: 766 SLCGGEPCPPIFRSPIASMEDIMDNHVI 793
>gi|242011511|ref|XP_002426492.1| 5'-3' exoribonuclease, putative [Pediculus humanus corporis]
gi|212510618|gb|EEB13754.1| 5'-3' exoribonuclease, putative [Pediculus humanus corporis]
Length = 869
Score = 589 bits (1518), Expect = e-165, Method: Compositional matrix adjust.
Identities = 345/760 (45%), Positives = 450/760 (59%), Gaps = 85/760 (11%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPAF+RWL+ +YP IV VEE P+V +GV VD +PNPNG+EFDNLYLDMNGII
Sbjct: 1 MGVPAFFRWLSKKYPSVIVYCVEEKPKVI-DGVKISVDSLQPNPNGVEFDNLYLDMNGII 59
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ KPAP + D++ IFD ID +F +VRPRKLLYLAIDGVAPRAKMNQQR+RRF
Sbjct: 60 HPCTHPEDKPAPKNEDEMMIEIFDCIDRLFSIVRPRKLLYLAIDGVAPRAKMNQQRSRRF 119
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETC--DSNVITPGTQFMAVLSAALQYF 178
RA+K++AE E RLR+E G L EKP+ DSN ITPGT FM LSA L Y+
Sbjct: 120 RASKESAEKIEEITRLREELLNKGAYLPP-EKPQESHFDSNCITPGTPFMNRLSACLDYY 178
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
I +LN W+ KVILSDA+VPGEGEHKIM +IR QR P DPNT+H L G DADLI
Sbjct: 179 IHDKLNNDAAWKGIKVILSDASVPGEGEHKIMDFIRKQRAQPDHDPNTQHVLCGADADLI 238
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
ML LATHE +F+I+RE P + + C +C Q+GH +C G P P D ++ T
Sbjct: 239 MLGLATHEPNFTIIREEFR-PNKPKPCEICSQLGHDMKDCIGCP--KPLDGEMIETTTFG 295
Query: 299 KK-KYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIR 357
++ + F+ + VLREYL+ EL +P PF +FER++DD+VF+CFFVGNDFLPH+P+LEIR
Sbjct: 296 EEVPFIFVRLSVLREYLEKELTMPGLPFKYDFERVIDDWVFMCFFVGNDFLPHLPSLEIR 355
Query: 358 EGAINLLMHVYRREFTAMGGYLTDAG-------EVLLDRVEKFIQSVAVYEDQI------ 404
EGAI+ L+++Y+ GG++TD+G +++L+ + K + + Q
Sbjct: 356 EGAIDRLVNLYKNCVYKTGGFVTDSGDVNLNRVQLILNELGKVEDEIFKHRQQTELMYKR 415
Query: 405 ---FQKRTRIQ----------------------------------------QAYEYNEAM 421
+KR +Q QA N +
Sbjct: 416 RNAAKKRIALQYKNEIPASLPVGQFAPTPLGQNFQPPAIVSPRQTARDMRIQASHSNSHI 475
Query: 422 KLNARRESSE---------ELLQAPVAVADTVKLGEPGYKERYYADKFEISNPEEIDKVK 472
+ + ESSE E D V+L E G+K+RYY KF++ + + ID +
Sbjct: 476 EALLKDESSERRGNKRPLKEDSMEEEETYDEVRLWEDGFKDRYYESKFDVKS-DNID-FR 533
Query: 473 KDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDLEITFFLG-EPFRPF 531
V +YV GLCWV RYYYQ SW+WF+PYHYAPFASD ++ +L F G +PF+P
Sbjct: 534 IRVAHEYVRGLCWVLRYYYQGCASWKWFFPYHYAPFASDFINIGNLSTQFEKGTQPFKPL 593
Query: 532 DQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDE 591
+QLMG P ASSS +P+ + LM DP S I FYP DF+ID+NGK+FAWQGV LPF+DE
Sbjct: 594 EQLMGVFPPASSSHVPKSWAVLMHDPLSSIIDFYPLDFKIDLNGKKFAWQGVALLPFVDE 653
Query: 592 KLLLRQTKKLEVFLTEEELFRNSVMLDLLYVHPQHPLYQQITLYCQLYHQLPPQDRFAWE 651
K L R L LT E RN+ D +Y+ + Y + LY A E
Sbjct: 654 KRLFRALAPLYDLLTPAEKIRNTQGDDKIYLGINNKGY---SFLKNLYESQESTPNEAIE 710
Query: 652 IDVNASGGMNGYIWLCERN--GLRSIIPSPVKGLPDIERN 689
I + GM G + L ++ G + SP++ LP I N
Sbjct: 711 ICFD---GMRGNV-LHSKDFIGHLETLLSPLRDLPSIHEN 746
>gi|357471609|ref|XP_003606089.1| 5'-3' exoribonuclease [Medicago truncatula]
gi|355507144|gb|AES88286.1| 5'-3' exoribonuclease [Medicago truncatula]
Length = 866
Score = 589 bits (1518), Expect = e-165, Method: Compositional matrix adjust.
Identities = 331/739 (44%), Positives = 434/739 (58%), Gaps = 130/739 (17%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP+FYRWL ++YP + D+ +P N +E+DNLYLDMN II
Sbjct: 1 MGVPSFYRWLLNKYPKAFEDI---NPNT--------------NTTNVEYDNLYLDMNSII 43
Query: 61 HPCFHPD------GKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQ 114
HPCFHP+ G P PT++ +VF ++F+YID + + +PRKLLY+AIDGVAPRAKMNQ
Sbjct: 44 HPCFHPNDDDNNNGTP-PTTFVEVFANMFEYIDRLVTIAKPRKLLYMAIDGVAPRAKMNQ 102
Query: 115 QRTRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAA 174
QRTRRFR KD E EEERLRKEFE GK + K++ E DSN+ITPGT FM +S A
Sbjct: 103 QRTRRFRNVKDDEMREVEEERLRKEFEMEGKQVLPKQECEVSDSNIITPGTDFMHQISNA 162
Query: 175 LQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLD 234
L+ +I ++++ P W+ VILSDANVPGEGEHK+MS+IR QR LP +DPNT HCLYG D
Sbjct: 163 LKSYISSKISSDPLWKGIMVILSDANVPGEGEHKVMSFIRKQRGLPDYDPNTVHCLYGSD 222
Query: 235 ADLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDD 294
ADLIML L+ HE HFSILREVI P + + P + P
Sbjct: 223 ADLIMLGLSCHEPHFSILREVILDPPDRYEKL---------------PPNAPM------- 260
Query: 295 TPIHKKKYQFLNIWVLREYLQYELDIPNPP--FPINFERIVDDFVFLCFFVGNDFLPHMP 352
+++ L+IW+LREYL+ E+ I +PP F + ERIVDDF+F+CFF GNDFLPH+P
Sbjct: 261 ------RFKLLHIWLLREYLEIEMKIEDPPKNFVFDLERIVDDFIFICFFSGNDFLPHLP 314
Query: 353 TLEIREGAINLLMHVYRREFTAMGGYLTDAGE--------VLLDRVEKFIQSVAVYEDQI 404
+L I E AI+LLM VY++EF+ +GGYL D + V L RVEKF+ V YE++I
Sbjct: 315 SLYIHEDAIDLLMTVYKKEFSKIGGYLVDINKIGEKHGAYVKLSRVEKFVLMVGTYEEKI 374
Query: 405 FQKRTRIQQAY--------EYNEAMKLNARR---------------------------ES 429
F KRT I+ E ++ +LN+ +S
Sbjct: 375 FSKRTAIRDKKLRRLISDNENSKQEELNSHDCMDFDNENSSNCALRIKKAEASDNVCPQS 434
Query: 430 SEELLQAPVA---------------------VADTVKLGEPGYKERYYADKFEISNPEEI 468
EE+L+ + D +KLG G+KERYY +KF + I
Sbjct: 435 DEEILKNTKDLKEKLKKCIKDKGDLFKSGDFLTDKIKLGNVGFKERYYKEKFSVEGSTNI 494
Query: 469 DKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDLEITFFLGEPF 528
+ +K++V KY EGL WV +YY+ V SW WFYPYHY PF SDLK ++ + + F G PF
Sbjct: 495 ELKRKEIVQKYTEGLLWVLQYYFSGVASWTWFYPYHYGPFVSDLKGMAQVRVNFEKGVPF 554
Query: 529 RPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPF 588
PFDQL+ LP S+ ALP+ Y LM D S I+ Y DF+ID+ GKRF WQGV KLP+
Sbjct: 555 LPFDQLLSVLPQKSAYALPKAYAQLMLDEQSKIFDLYSQDFEIDIEGKRFMWQGVCKLPY 614
Query: 589 IDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVHPQHPLYQQITLYCQLYHQLPPQDRF 648
+DEK LL +T++L+ L+E E RNSV +D L V L ++I C L
Sbjct: 615 MDEKRLLTETRELKNELSESEAKRNSVEVDRLLVSGTTKLAEKI---CSLKLN------- 664
Query: 649 AWEIDVNASGGMNGYIWLC 667
++D + S G+ G I LC
Sbjct: 665 --KLDTSISDGIGGIISLC 681
>gi|301111760|ref|XP_002904959.1| 5'-3' exoribonuclease, putative [Phytophthora infestans T30-4]
gi|262095289|gb|EEY53341.1| 5'-3' exoribonuclease, putative [Phytophthora infestans T30-4]
Length = 972
Score = 589 bits (1518), Expect = e-165, Method: Compositional matrix adjust.
Identities = 332/757 (43%), Positives = 443/757 (58%), Gaps = 86/757 (11%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQV-DGEGVARPVDVSKPNPNGMEFDNLYLDMNGI 59
MGVPAFYRW+ ++YP +VD VE V +GE D + P+PNG E DNLY+DMNG+
Sbjct: 1 MGVPAFYRWVQEKYPKCVVDCVESRAVVLEGERHFELTDTTGPSPNGFEVDNLYVDMNGL 60
Query: 60 IHPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRR 119
IHPC HP+ AP + +++++ + Y+D + VRPR++LYLAIDGVAPRAKMNQQR RR
Sbjct: 61 IHPCAHPENGEAPKTEEEMYRRVMAYVDRLVAAVRPRRVLYLAIDGVAPRAKMNQQRARR 120
Query: 120 FRAAKDAAE-AEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
FR+A++A + E E+E L K+ S +EKP DSNVITPGT+FMA L+ L+++
Sbjct: 121 FRSAQEAEQRMEVEKEALEYMSALGHKVPSKQEKP--WDSNVITPGTKFMAKLAKHLRFY 178
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
I+ R+N W+ K+ILSDA VPGEGEHK+M YIR+QR+ PG+DPN H L+GLDADLI
Sbjct: 179 IRDRVNNNAAWKSIKIILSDAGVPGEGEHKLMQYIRVQRSQPGYDPNQHHVLHGLDADLI 238
Query: 239 MLSLATHEIHFSILREVITLPGQ--------QEKCFVCGQVGHLAAECHGKPGDNPADWN 290
ML LATHE+ FSILRE + Q +++ + L G+ G++ AD
Sbjct: 239 MLGLATHEVKFSILREEVLFGKQKYERERQKEQQTVLDANGTTLNKRKRGEFGEHDADLV 298
Query: 291 GVDDTPIHKKKYQFLNIWVLREYLQYELDIPNP--PFPINFERIVDDFVFLCFFVGNDFL 348
D P+ Q+L+I LREYLQ E + + PF +FER++DDFVFLCFFVGNDFL
Sbjct: 299 ASDLKPL-----QYLHIATLREYLQVEFEPLSRVLPFEYDFERVIDDFVFLCFFVGNDFL 353
Query: 349 PHMPTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKR 408
PH+P+L+IR+GA++ L+ +Y + AMGGY+TD G V L RV+ + V ED IFQ+R
Sbjct: 354 PHLPSLDIRDGALDFLILIYAKLLPAMGGYITDGGHVDLSRVDVILAEVGQVEDVIFQRR 413
Query: 409 TRIQQAYEYN------------------------------------------------EA 420
Q E EA
Sbjct: 414 ALKQAENERRRKSHLSNEKKDQIAAAAAKDSAVEILKKRRIDKDIIAADKKYGGLTAEEA 473
Query: 421 MKLNARRESSEELLQAPVAVADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYV 480
+K + ++L Q V D V+LGEPG+K RYY+DK + ++ E+ ++ V Y+
Sbjct: 474 VKARVKESVEKKLEQYREEVQDVVRLGEPGWKTRYYSDKLK-ADDIEVGGGRERVFHAYI 532
Query: 481 EGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPA 540
EGLCWV RYYY SWQWFYP+HYAPFASDL+++ EI F G PF PF+QLMG PA
Sbjct: 533 EGLCWVMRYYYTGCASWQWFYPFHYAPFASDLRNIDRFEIKFDEGLPFHPFEQLMGVFPA 592
Query: 541 ASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKK 600
S A+P+ YR+LM+DP SPI FYP + +D NGK W VV LPFIDE+ LL K+
Sbjct: 593 GSGHAIPKPYRSLMSDPESPIIDFYPTEIPVDPNGKAMPWLWVVLLPFIDEERLLEAMKE 652
Query: 601 LEVFLTEEELFRNSVM-LDLLYVHPQHPLYQQITLYCQLYHQLPPQDRFA-WEIDVNASG 658
LTE E RN+ ++++ H + P+ + PP A + D S
Sbjct: 653 PNQKLTEAEKKRNARFGKEVVFFHTKCPVTKN-----------PPTTELAEAQADPRISQ 701
Query: 659 GMNGYIWLCER--NGLRSIIPSPVKG---LPDIERNQ 690
NG + E + I+PSP K L DI NQ
Sbjct: 702 SFNGSLIYIESLYFPIGGIVPSPEKSQRHLADIPNNQ 738
>gi|339249025|ref|XP_003373500.1| 5'-3' exoribonuclease 2 [Trichinella spiralis]
gi|316970366|gb|EFV54322.1| 5'-3' exoribonuclease 2 [Trichinella spiralis]
Length = 820
Score = 588 bits (1515), Expect = e-165, Method: Compositional matrix adjust.
Identities = 325/702 (46%), Positives = 433/702 (61%), Gaps = 79/702 (11%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPAF+RWL+ +YP +++ +E+ P+ D +G PVD ++PNP+G+EFD YLDMNGII
Sbjct: 1 MGVPAFFRWLSRKYPSIVMNCIEDTPR-DVDGTTVPVDNTQPNPHGIEFDTFYLDMNGII 59
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ KPAP S +++ +IF+YID + +VRPR+LLY+AIDGVAPRAKMNQQRTRRF
Sbjct: 60 HPCCHPEDKPAPKSEEEMMVAIFEYIDRLMCIVRPRRLLYMAIDGVAPRAKMNQQRTRRF 119
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEK-PETCDSNVITPGTQFMAVLSAALQYFI 179
RA+K+AAE E + ++R++ G L A+ + DSN ITPGT FMA L+ L+Y+I
Sbjct: 120 RASKEAAEKEEQIRQIREDLRAQGIPLPAESTDKQHFDSNCITPGTPFMARLAICLRYYI 179
Query: 180 QARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIM 239
RLN P WQ VILSDA+VPGEGEHKIM YIR QR DPNT H L G DADLIM
Sbjct: 180 HERLNTDPAWQNLLVILSDASVPGEGEHKIMDYIRHQRACASHDPNTHHVLCGADADLIM 239
Query: 240 LSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIHK 299
L LATHE +F+I+RE +P C +C GH +C G + N P+ K
Sbjct: 240 LGLATHEPNFTIIREEF-VPNLPRPCEICNNYGHTMQDCQGL--SILENENEEAHRPVLK 296
Query: 300 K-KYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIRE 358
K ++ F+ + VLREYLQ EL++PN F +FER VDD+VF+CFFVGNDFLPH+P+LEIRE
Sbjct: 297 KTQFIFIRLSVLREYLQRELEMPNIKFKYDFERCVDDWVFMCFFVGNDFLPHLPSLEIRE 356
Query: 359 GAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKR---------- 408
GAI+ L+ +Y+ GGYLT+ G V L RV+ + + ED+IF++R
Sbjct: 357 GAIDRLVKLYKDCVYRTGGYLTENGFVNLKRVQLIMSELGKVEDEIFRQRQEREAMDNIF 416
Query: 409 ------------TRIQQAYEYN-----------------EAMKLNARRESSEELLQAPVA 439
R QA ++ + L+ + ++ E+ QA +A
Sbjct: 417 LLDWIQFSNKAKMRRMQAENFDAPAFIPQNAFAPTPIGESPLPLSNAKRTAMEMRQAAMA 476
Query: 440 VA----------------------DTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVL 477
V D V+L E G+K+RYY KF+ S P++++ + V
Sbjct: 477 VTSSTKREFNGAANAEDANDEGPLDEVRLWECGWKDRYYLVKFQCS-PKDLE-FRHHVAN 534
Query: 478 KYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDLEITFFLGE-PFRPFDQLMG 536
YVEGLCWV RYYYQ CSW+W++P+HY+PFASD ++ DL+I F P +P +QLM
Sbjct: 535 CYVEGLCWVLRYYYQGCCSWKWYFPFHYSPFASDFLNIGDLKIDFSEKTMPIKPLEQLMS 594
Query: 537 TLPAASSSALPEKYRNLMTDP---SSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKL 593
PAASS LP+ + LM DP S I YP DF++D+NGKR+AWQGVV LPF+D +
Sbjct: 595 VFPAASSKHLPKSWAALMHDPVRDKSTIIDMYPSDFKVDLNGKRYAWQGVVLLPFVDAE- 653
Query: 594 LLRQTKKLEVF---LTEEELFRNSVMLDLLYVHPQHPLYQQI 632
R + LEV LTEEE FRN DLL++ +H + I
Sbjct: 654 --RLNEALEVVYPDLTEEERFRNKQGNDLLFISSKHEAFDFI 693
>gi|325186843|emb|CCA21388.1| 5'3' exoribonuclease putative [Albugo laibachii Nc14]
Length = 1023
Score = 585 bits (1507), Expect = e-164, Method: Compositional matrix adjust.
Identities = 324/757 (42%), Positives = 450/757 (59%), Gaps = 84/757 (11%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDP-QVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGI 59
MGVPAFYRW+ +YP +VD E++ ++G+ ++++ PNPN +E NLY+DMNG+
Sbjct: 8 MGVPAFYRWVLAKYPKCVVDCKEQNAVMIEGKRHYELLNITGPNPNELEVANLYIDMNGL 67
Query: 60 IHPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRR 119
IHPC HP+ P + +++++ + +Y+D + VRPR++LYLAIDGVAPRAKMNQQR RR
Sbjct: 68 IHPCAHPENGEQPKTEEEMYQRVMEYVDRLVAAVRPRRVLYLAIDGVAPRAKMNQQRARR 127
Query: 120 FRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFI 179
FR+AK+A E E+ + + G + +++ + DSNVITPGT+FM+ LS L+++I
Sbjct: 128 FRSAKEAEERGEIEKEAIEYMKAMGHQVQEQDQSKNWDSNVITPGTKFMSKLSKYLRFYI 187
Query: 180 QARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIM 239
+ R+NQ W+ KVI SDA+VPGEGEHK+MS+IRLQR+ PG+DPN H L+GLDADLIM
Sbjct: 188 RERINQNEAWKSIKVIFSDASVPGEGEHKLMSFIRLQRSQPGYDPNQHHVLHGLDADLIM 247
Query: 240 LSLATHEIHFSILREVITLPGQ--------QEKCFVCGQVGHLAAECHGKPGDNPADWNG 291
L LATHE++FSILRE + Q Q+ + + G+ G++ AD
Sbjct: 248 LGLATHEVNFSILREEVLFGKQKYEKEKSNQQTILDANGTQDMRKKKRGEHGEHDADVIP 307
Query: 292 VDDTPIHKKKYQFLNIWVLREYLQYELDIP---NPPFPINFERIVDDFVFLCFFVGNDFL 348
D TP+ QFL+I LREYL++E +P PFP +FER+VDDFVFLCFFVGNDFL
Sbjct: 308 TDQTPL-----QFLHIATLREYLEFEF-LPLAQTLPFPYDFERVVDDFVFLCFFVGNDFL 361
Query: 349 PHMPTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIF--- 405
PH+P+L+IR+GA++ L+ +Y + + GYLTDAGEV L RV + V ED++F
Sbjct: 362 PHLPSLDIRDGALDFLILMYAKLLPTLNGYLTDAGEVNLSRVNAILAQVGAVEDEVFLRR 421
Query: 406 -----------------QKRTRIQQAYEYNEAMKLNARRE---------------SSEEL 433
+K+ +I A ++A+++ +R S+E+
Sbjct: 422 AAKQAESDRFRKNRFSNEKKDQIGAASVRSDAVEIQKKRRLDQTNVIADAKYGGMSAEQA 481
Query: 434 LQAPVA-------------VADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYV 480
+QA V V D V+LGEPG+K RYY+DKF+ + K V+ YV
Sbjct: 482 IQARVKEMVDGQLDKHRQEVNDVVRLGEPGWKARYYSDKFKADDIAH-GGGKAKVLQSYV 540
Query: 481 EGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPA 540
EGLCWV +YYY SW WFYP+HYAPFASDL ++ I+F LG+PFRPF+QLMG PA
Sbjct: 541 EGLCWVMKYYYSGCASWNWFYPFHYAPFASDLVNIDKFTISFHLGQPFRPFEQLMGVFPA 600
Query: 541 ASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKK 600
AS A+P+ YR L+ DP SPI FYP + +D NGK W VV LPFIDE LL+ +
Sbjct: 601 ASGHAIPKPYRWLLRDPKSPIIDFYPTEIPVDPNGKPMPWLWVVLLPFIDEARLLQAMEP 660
Query: 601 LEVFLTEEELFRNS-VMLDLLYVHPQHPLYQQITLYCQLYHQLPPQDRFAW-EIDVNASG 658
L+ E RN ++++ H C+L P D+ ++D S
Sbjct: 661 ENEKLSALEKKRNQRYGKEIVFFHSD----------CRLTKDSLPDDQNTHVKVDTTISV 710
Query: 659 GMNGYIWLCE--RNGLRSIIPSPVKG---LPDIERNQ 690
+G ++ E L I+PSP K DI NQ
Sbjct: 711 SFSGALFYVEALHFPLGCIVPSPEKKPRHFMDISNNQ 747
>gi|413921160|gb|AFW61092.1| hypothetical protein ZEAMMB73_651968 [Zea mays]
Length = 1079
Score = 582 bits (1501), Expect = e-163, Method: Compositional matrix adjust.
Identities = 299/413 (72%), Positives = 352/413 (85%), Gaps = 1/413 (0%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPAFYRWLA++YP+ +VDVVEE+P PVD SKPNPNG+EFDNLYLDMNGII
Sbjct: 1 MGVPAFYRWLAEKYPMVVVDVVEEEPVEIEGVRV-PVDTSKPNPNGLEFDNLYLDMNGII 59
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPCFHP+ +P+PT++ +VF+ +FDYID +F++VRPRKL+Y+AIDGVAPRAKMNQQR+RRF
Sbjct: 60 HPCFHPEDRPSPTTFAEVFQCMFDYIDRLFIMVRPRKLMYMAIDGVAPRAKMNQQRSRRF 119
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQ 180
RAAKDAA+A AEEERLR+EFE G+ L AK++ +TCDSNVITPGT+FMAVLS ALQY+I
Sbjct: 120 RAAKDAADAAAEEERLREEFEREGRRLPAKQQSQTCDSNVITPGTEFMAVLSVALQYYIH 179
Query: 181 ARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
RLN PGW+ KVILSDANVPGEGEHKIMSYIR QRNLPGF+PNTRHCLYGLDADLIML
Sbjct: 180 QRLNYDPGWKKIKVILSDANVPGEGEHKIMSYIRGQRNLPGFNPNTRHCLYGLDADLIML 239
Query: 241 SLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIHKK 300
+LATHE+HFSILREV+ PGQQ+KCF+CGQVGHLAA C GK +++ + + KK
Sbjct: 240 ALATHEVHFSILREVVFTPGQQDKCFLCGQVGHLAANCEGKAKRKAGEYDEKGEAIVPKK 299
Query: 301 KYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGA 360
YQFLNIW LREYL+YE +PNPPF I+FERIVDDF+F+CFFVGNDFLPHMPTLEIREGA
Sbjct: 300 PYQFLNIWTLREYLEYEFRMPNPPFQIDFERIVDDFIFMCFFVGNDFLPHMPTLEIREGA 359
Query: 361 INLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQ 413
INLLM VY++EF +MGGYLTD+ L+RVE FIQ+V YED+IFQKR R+ Q
Sbjct: 360 INLLMAVYKKEFPSMGGYLTDSCTPDLNRVEHFIQAVGSYEDKIFQKRARLHQ 412
Score = 296 bits (759), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 153/297 (51%), Positives = 193/297 (64%), Gaps = 24/297 (8%)
Query: 419 EAMKLNARRESSEELLQAPVAVADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLK 478
++M +A RE S+ + + + D VKLGEPG+++RYY +KF PE ++++++DV LK
Sbjct: 509 KSMLKDALREKSD-VFNSENSEEDKVKLGEPGWRDRYYEEKFGARTPERMEEIRRDVALK 567
Query: 479 YVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTL 538
Y EGLCWV YYY+ VCSWQWFYPYHYAPFASDL LS L ITF LG PF+PFDQLMG
Sbjct: 568 YTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLTSLSQLNITFELGSPFKPFDQLMGVF 627
Query: 539 PAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQT 598
PAAS+ ALP KYR LMTDP+SPI FYP DF++DMNGKRF+WQG+ KLPFI+E LL +
Sbjct: 628 PAASAHALPLKYRQLMTDPNSPIIDFYPTDFEVDMNGKRFSWQGIAKLPFIEEDRLLAEI 687
Query: 599 KKLEVFLTEEELFRNSVMLDLLYVHPQHPLYQQITLYCQLYHQLPPQDRFAW--EIDVNA 656
KK+E LT EE RNS M ++L+V+ H L I + LP +DR A ++D +A
Sbjct: 688 KKVEDTLTPEEARRNSTMCNMLFVNGAHSLSPYIYSLNSKFGHLPDKDRGAIKEKLDPSA 747
Query: 657 ---------------------SGGMNGYIWLCERNGLRSIIPSPVKGLPDIERNQAM 692
SGGMNGYI LC + + SPV GL DI NQ +
Sbjct: 748 RLAKFFRIIDSLTLLLLFLLFSGGMNGYIALCGGDPSPPVFRSPVDGLEDIMDNQVI 804
>gi|413921159|gb|AFW61091.1| hypothetical protein ZEAMMB73_651968 [Zea mays]
Length = 1058
Score = 582 bits (1500), Expect = e-163, Method: Compositional matrix adjust.
Identities = 299/413 (72%), Positives = 352/413 (85%), Gaps = 1/413 (0%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPAFYRWLA++YP+ +VDVVEE+P PVD SKPNPNG+EFDNLYLDMNGII
Sbjct: 1 MGVPAFYRWLAEKYPMVVVDVVEEEPVEIEGVRV-PVDTSKPNPNGLEFDNLYLDMNGII 59
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPCFHP+ +P+PT++ +VF+ +FDYID +F++VRPRKL+Y+AIDGVAPRAKMNQQR+RRF
Sbjct: 60 HPCFHPEDRPSPTTFAEVFQCMFDYIDRLFIMVRPRKLMYMAIDGVAPRAKMNQQRSRRF 119
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQ 180
RAAKDAA+A AEEERLR+EFE G+ L AK++ +TCDSNVITPGT+FMAVLS ALQY+I
Sbjct: 120 RAAKDAADAAAEEERLREEFEREGRRLPAKQQSQTCDSNVITPGTEFMAVLSVALQYYIH 179
Query: 181 ARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
RLN PGW+ KVILSDANVPGEGEHKIMSYIR QRNLPGF+PNTRHCLYGLDADLIML
Sbjct: 180 QRLNYDPGWKKIKVILSDANVPGEGEHKIMSYIRGQRNLPGFNPNTRHCLYGLDADLIML 239
Query: 241 SLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIHKK 300
+LATHE+HFSILREV+ PGQQ+KCF+CGQVGHLAA C GK +++ + + KK
Sbjct: 240 ALATHEVHFSILREVVFTPGQQDKCFLCGQVGHLAANCEGKAKRKAGEYDEKGEAIVPKK 299
Query: 301 KYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGA 360
YQFLNIW LREYL+YE +PNPPF I+FERIVDDF+F+CFFVGNDFLPHMPTLEIREGA
Sbjct: 300 PYQFLNIWTLREYLEYEFRMPNPPFQIDFERIVDDFIFMCFFVGNDFLPHMPTLEIREGA 359
Query: 361 INLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQ 413
INLLM VY++EF +MGGYLTD+ L+RVE FIQ+V YED+IFQKR R+ Q
Sbjct: 360 INLLMAVYKKEFPSMGGYLTDSCTPDLNRVEHFIQAVGSYEDKIFQKRARLHQ 412
Score = 308 bits (790), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 153/276 (55%), Positives = 193/276 (69%), Gaps = 3/276 (1%)
Query: 419 EAMKLNARRESSEELLQAPVAVADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLK 478
++M +A RE S+ + + + D VKLGEPG+++RYY +KF PE ++++++DV LK
Sbjct: 509 KSMLKDALREKSD-VFNSENSEEDKVKLGEPGWRDRYYEEKFGARTPERMEEIRRDVALK 567
Query: 479 YVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTL 538
Y EGLCWV YYY+ VCSWQWFYPYHYAPFASDL LS L ITF LG PF+PFDQLMG
Sbjct: 568 YTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLTSLSQLNITFELGSPFKPFDQLMGVF 627
Query: 539 PAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQT 598
PAAS+ ALP KYR LMTDP+SPI FYP DF++DMNGKRF+WQG+ KLPFI+E LL +
Sbjct: 628 PAASAHALPLKYRQLMTDPNSPIIDFYPTDFEVDMNGKRFSWQGIAKLPFIEEDRLLAEI 687
Query: 599 KKLEVFLTEEELFRNSVMLDLLYVHPQHPLYQQITLYCQLYHQLPPQDRFAW--EIDVNA 656
KK+E LT EE RNS M ++L+V+ H L I + LP +DR A ++D +A
Sbjct: 688 KKVEDTLTPEEARRNSTMCNMLFVNGAHSLSPYIYSLNSKFGHLPDKDRGAIKEKLDPSA 747
Query: 657 SGGMNGYIWLCERNGLRSIIPSPVKGLPDIERNQAM 692
SGGMNGYI LC + + SPV GL DI NQ +
Sbjct: 748 SGGMNGYIALCGGDPSPPVFRSPVDGLEDIMDNQVI 783
>gi|242056911|ref|XP_002457601.1| hypothetical protein SORBIDRAFT_03g010040 [Sorghum bicolor]
gi|241929576|gb|EES02721.1| hypothetical protein SORBIDRAFT_03g010040 [Sorghum bicolor]
Length = 1066
Score = 582 bits (1499), Expect = e-163, Method: Compositional matrix adjust.
Identities = 299/413 (72%), Positives = 349/413 (84%), Gaps = 1/413 (0%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPAFYRWLA++YP+ +VDVVEE+P PVD SKPNPNG+EFDNLYLDMNGII
Sbjct: 1 MGVPAFYRWLAEKYPMVVVDVVEEEPVEIEGVKV-PVDTSKPNPNGLEFDNLYLDMNGII 59
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPCFHP+ +P+PT++ +VF+ +FDYID +F++VRPRKLLY+AIDGVAPRAKMNQQR+RRF
Sbjct: 60 HPCFHPEDRPSPTTFAEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQ 180
RAAKDAA+A AEEERLR+EFE G+ L K++ +TCDSNVITPGT+FMAVLS ALQY+I
Sbjct: 120 RAAKDAADAAAEEERLREEFEREGRKLPPKQQSQTCDSNVITPGTEFMAVLSVALQYYIH 179
Query: 181 ARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
RLN PGW+ KVILSDANVPGEGEHKIMSYIR QRNL GF+PNTRHCLYGLDADLIML
Sbjct: 180 LRLNYDPGWKQIKVILSDANVPGEGEHKIMSYIRGQRNLSGFNPNTRHCLYGLDADLIML 239
Query: 241 SLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIHKK 300
+LATHE+HFSILREV+ PGQQ+KCF+CGQVGHLAA C GK +++ D + KK
Sbjct: 240 ALATHEVHFSILREVVYTPGQQDKCFLCGQVGHLAANCEGKAKRKAGEFDEKGDAIVPKK 299
Query: 301 KYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGA 360
YQFLNIW LREYL+YE +PNPPF I+FERIVDDF+F+CFFVGNDFLPHMPTLEIREGA
Sbjct: 300 PYQFLNIWTLREYLEYEFRMPNPPFKIDFERIVDDFIFMCFFVGNDFLPHMPTLEIREGA 359
Query: 361 INLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQ 413
INLLM VY++EF +MGGYLTD+ L RVE FIQ+V YED+IFQKR R+ Q
Sbjct: 360 INLLMAVYKKEFPSMGGYLTDSCTPDLSRVEHFIQAVGSYEDKIFQKRARLHQ 412
Score = 310 bits (794), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 154/276 (55%), Positives = 191/276 (69%), Gaps = 3/276 (1%)
Query: 419 EAMKLNARRESSEELLQAPVAVADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLK 478
++M +A RE S+ + + D VKLGEPG++ERYY +KF PE+I+++++DVVLK
Sbjct: 512 KSMLKDALREKSD-IFNSDNPDEDKVKLGEPGWRERYYEEKFGARTPEQIEEIRRDVVLK 570
Query: 479 YVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTL 538
Y EGLCWV YYY+ VCSWQWFYPYHYAPFASDL L L I F LG PF+PFDQLMG
Sbjct: 571 YTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLSGLGQLNIKFELGTPFKPFDQLMGVF 630
Query: 539 PAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQT 598
PAAS+ ALP +YR LMTDP SPI FYP DF++DMNGKR++WQG+ KLPFIDE LL +
Sbjct: 631 PAASAHALPLQYRQLMTDPHSPIIDFYPIDFEVDMNGKRYSWQGIAKLPFIDEARLLAEI 690
Query: 599 KKLEVFLTEEELFRNSVMLDLLYVHPQHPLYQQITLYCQLYHQLPPQDR--FAWEIDVNA 656
KK+E LT EE RNS+M D+L+V+ HPL I + LP + R ++D +A
Sbjct: 691 KKVEHTLTPEEARRNSIMFDMLFVNGSHPLSPYIYSLNSKFGHLPDKKRNEIKEKLDPSA 750
Query: 657 SGGMNGYIWLCERNGLRSIIPSPVKGLPDIERNQAM 692
SGGMNGYI LC + I SPV GL DI NQ +
Sbjct: 751 SGGMNGYITLCSGDPCPPIFRSPVDGLEDIMDNQVI 786
>gi|125528546|gb|EAY76660.1| hypothetical protein OsI_04616 [Oryza sativa Indica Group]
Length = 1068
Score = 581 bits (1498), Expect = e-163, Method: Compositional matrix adjust.
Identities = 297/413 (71%), Positives = 350/413 (84%), Gaps = 1/413 (0%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPAFYRWLA++YP+ +VDVVEE+ PVD SKPNPNG+EFDNLYLDMNGII
Sbjct: 1 MGVPAFYRWLAEKYPMVVVDVVEEEAVEIEGVKV-PVDTSKPNPNGLEFDNLYLDMNGII 59
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPCFHP+ +P+PT++ +VF+ +FDYID +F++VRPRKL+Y+AIDGVAPRAKMNQQR+RRF
Sbjct: 60 HPCFHPEDRPSPTTFAEVFQCMFDYIDRLFVMVRPRKLMYMAIDGVAPRAKMNQQRSRRF 119
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQ 180
RAAKDAA+A AEEERLR+EFE G+ L K++ +TCDSNVITPGT+FMAVLS ALQY+I
Sbjct: 120 RAAKDAADAAAEEERLREEFEREGRKLPPKQQSQTCDSNVITPGTEFMAVLSIALQYYIH 179
Query: 181 ARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
RLN PGW+ KVILSDANVPGEGEHKIMSYIR QRNLPGF+PNTRHCLYGLDADLIML
Sbjct: 180 LRLNYDPGWKQVKVILSDANVPGEGEHKIMSYIRGQRNLPGFNPNTRHCLYGLDADLIML 239
Query: 241 SLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIHKK 300
+LATHE+HFSILREV+ PGQQ+KCF+CGQVGHLAA C GK +++ + + KK
Sbjct: 240 ALATHEVHFSILREVVYTPGQQDKCFLCGQVGHLAANCEGKVKRKAGEFDEKGEAIVPKK 299
Query: 301 KYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGA 360
YQFLNIW LREYL+YE + NPPFPI+FERIVDDF+F+CFFVGNDFLPHMPTLEIREGA
Sbjct: 300 PYQFLNIWTLREYLEYEFRMQNPPFPIDFERIVDDFIFMCFFVGNDFLPHMPTLEIREGA 359
Query: 361 INLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQ 413
INLLM VY++EF +MGGYLTDA L++VE FIQ+V YED+IFQKR R+ Q
Sbjct: 360 INLLMAVYKKEFPSMGGYLTDACTPDLNKVEHFIQAVGSYEDKIFQKRARLHQ 412
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 151/276 (54%), Positives = 191/276 (69%), Gaps = 3/276 (1%)
Query: 419 EAMKLNARRESSEELLQAPVAVADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLK 478
+ M +A RE S+ + + D +KLGEPG++ERYY +KF P +I+++++DVVLK
Sbjct: 512 KTMLKDALREKSD-VFNSENPEEDKIKLGEPGWRERYYEEKFGARTPGQIEEIRRDVVLK 570
Query: 479 YVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTL 538
Y EGLCWV YYY+ VCSWQWFYPYHYAPFASDL L L ITF LG PF+PFDQLMG
Sbjct: 571 YTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLSGLGQLNITFELGSPFKPFDQLMGVF 630
Query: 539 PAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQT 598
PAASS ALP +YR LMTD +SPI FYP DF++DMNGKR++WQG+ KLPFIDE LL +
Sbjct: 631 PAASSHALPVQYRQLMTDANSPIIDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLAEI 690
Query: 599 KKLEVFLTEEELFRNSVMLDLLYVHPQHPLYQQITLYCQLYHQLPPQDR--FAWEIDVNA 656
KK+E LT EE RNS+M ++L+V+ HPL I + LP ++R +ID ++
Sbjct: 691 KKVEHTLTPEEARRNSIMFNMLFVNGSHPLSPYIYSLNSKFGHLPDRERNEIKEKIDPSS 750
Query: 657 SGGMNGYIWLCERNGLRSIIPSPVKGLPDIERNQAM 692
SGGMNGYI LC + + SPV GL DI NQ +
Sbjct: 751 SGGMNGYISLCSGDPCPPVFRSPVDGLEDIMDNQVI 786
>gi|19571126|dbj|BAB86550.1| putative 5-3 exoribonuclease [Oryza sativa Japonica Group]
Length = 1064
Score = 581 bits (1498), Expect = e-163, Method: Compositional matrix adjust.
Identities = 297/413 (71%), Positives = 350/413 (84%), Gaps = 1/413 (0%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPAFYRWLA++YP+ +VDVVEE+ PVD SKPNPNG+EFDNLYLDMNGII
Sbjct: 1 MGVPAFYRWLAEKYPMVVVDVVEEEAVEIEGVKV-PVDTSKPNPNGLEFDNLYLDMNGII 59
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPCFHP+ +P+PT++ +VF+ +FDYID +F++VRPRKL+Y+AIDGVAPRAKMNQQR+RRF
Sbjct: 60 HPCFHPEDRPSPTTFAEVFQCMFDYIDRLFVMVRPRKLMYMAIDGVAPRAKMNQQRSRRF 119
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQ 180
RAAKDAA+A AEEERLR+EFE G+ L K++ +TCDSNVITPGT+FMAVLS ALQY+I
Sbjct: 120 RAAKDAADAAAEEERLREEFEREGRKLPPKQQSQTCDSNVITPGTEFMAVLSIALQYYIH 179
Query: 181 ARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
RLN PGW+ KVILSDANVPGEGEHKIMSYIR QRNLPGF+PNTRHCLYGLDADLIML
Sbjct: 180 LRLNYDPGWKQVKVILSDANVPGEGEHKIMSYIRGQRNLPGFNPNTRHCLYGLDADLIML 239
Query: 241 SLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIHKK 300
+LATHE+HFSILREV+ PGQQ+KCF+CGQVGHLAA C GK +++ + + KK
Sbjct: 240 ALATHEVHFSILREVVYTPGQQDKCFLCGQVGHLAANCEGKVKRKAGEFDEKGEAIVPKK 299
Query: 301 KYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGA 360
YQFLNIW LREYL+YE + NPPFPI+FERIVDDF+F+CFFVGNDFLPHMPTLEIREGA
Sbjct: 300 PYQFLNIWTLREYLEYEFRMQNPPFPIDFERIVDDFIFMCFFVGNDFLPHMPTLEIREGA 359
Query: 361 INLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQ 413
INLLM VY++EF +MGGYLTDA L++VE FIQ+V YED+IFQKR R+ Q
Sbjct: 360 INLLMAVYKKEFPSMGGYLTDACTPDLNKVEHFIQAVGSYEDKIFQKRARLHQ 412
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 151/276 (54%), Positives = 191/276 (69%), Gaps = 3/276 (1%)
Query: 419 EAMKLNARRESSEELLQAPVAVADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLK 478
+ M +A RE S+ + + D +KLGEPG++ERYY +KF P +I+++++DVVLK
Sbjct: 512 KTMLKDALREKSD-VFNSENPEEDKIKLGEPGWRERYYEEKFGARTPGQIEEIRRDVVLK 570
Query: 479 YVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTL 538
Y EGLCWV YYY+ VCSWQWFYPYHYAPFASDL L L ITF LG PF+PFDQLMG
Sbjct: 571 YTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLSGLGQLNITFELGSPFKPFDQLMGVF 630
Query: 539 PAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQT 598
PAASS ALP +YR LMTD +SPI FYP DF++DMNGKR++WQG+ KLPFIDE LL +
Sbjct: 631 PAASSHALPVQYRQLMTDANSPIIDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLAEI 690
Query: 599 KKLEVFLTEEELFRNSVMLDLLYVHPQHPLYQQITLYCQLYHQLPPQDR--FAWEIDVNA 656
KK+E LT EE RNS+M ++L+V+ HPL I + LP ++R +ID ++
Sbjct: 691 KKVEHTLTPEEARRNSIMFNMLFVNGSHPLSPYIYSLNSKFGHLPDRERNEIKEKIDPSS 750
Query: 657 SGGMNGYIWLCERNGLRSIIPSPVKGLPDIERNQAM 692
SGGMNGYI LC + + SPV GL DI NQ +
Sbjct: 751 SGGMNGYISLCSGDPCPPVFRSPVDGLEDIMDNQVI 786
>gi|115441335|ref|NP_001044947.1| Os01g0872700 [Oryza sativa Japonica Group]
gi|56785082|dbj|BAD82721.1| putative 5'-3' exoribonuclease (XRN3) [Oryza sativa Japonica Group]
gi|113534478|dbj|BAF06861.1| Os01g0872700 [Oryza sativa Japonica Group]
gi|215713440|dbj|BAG94577.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 1068
Score = 581 bits (1498), Expect = e-163, Method: Compositional matrix adjust.
Identities = 297/413 (71%), Positives = 350/413 (84%), Gaps = 1/413 (0%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPAFYRWLA++YP+ +VDVVEE+ PVD SKPNPNG+EFDNLYLDMNGII
Sbjct: 1 MGVPAFYRWLAEKYPMVVVDVVEEEAVEIEGVKV-PVDTSKPNPNGLEFDNLYLDMNGII 59
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPCFHP+ +P+PT++ +VF+ +FDYID +F++VRPRKL+Y+AIDGVAPRAKMNQQR+RRF
Sbjct: 60 HPCFHPEDRPSPTTFAEVFQCMFDYIDRLFVMVRPRKLMYMAIDGVAPRAKMNQQRSRRF 119
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQ 180
RAAKDAA+A AEEERLR+EFE G+ L K++ +TCDSNVITPGT+FMAVLS ALQY+I
Sbjct: 120 RAAKDAADAAAEEERLREEFEREGRKLPPKQQSQTCDSNVITPGTEFMAVLSIALQYYIH 179
Query: 181 ARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
RLN PGW+ KVILSDANVPGEGEHKIMSYIR QRNLPGF+PNTRHCLYGLDADLIML
Sbjct: 180 LRLNYDPGWKQVKVILSDANVPGEGEHKIMSYIRGQRNLPGFNPNTRHCLYGLDADLIML 239
Query: 241 SLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIHKK 300
+LATHE+HFSILREV+ PGQQ+KCF+CGQVGHLAA C GK +++ + + KK
Sbjct: 240 ALATHEVHFSILREVVYTPGQQDKCFLCGQVGHLAANCEGKVKRKAGEFDEKGEAIVPKK 299
Query: 301 KYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGA 360
YQFLNIW LREYL+YE + NPPFPI+FERIVDDF+F+CFFVGNDFLPHMPTLEIREGA
Sbjct: 300 PYQFLNIWTLREYLEYEFRMQNPPFPIDFERIVDDFIFMCFFVGNDFLPHMPTLEIREGA 359
Query: 361 INLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQ 413
INLLM VY++EF +MGGYLTDA L++VE FIQ+V YED+IFQKR R+ Q
Sbjct: 360 INLLMAVYKKEFPSMGGYLTDACTPDLNKVEHFIQAVGSYEDKIFQKRARLHQ 412
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 151/276 (54%), Positives = 191/276 (69%), Gaps = 3/276 (1%)
Query: 419 EAMKLNARRESSEELLQAPVAVADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLK 478
+ M +A RE S+ + + D +KLGEPG++ERYY +KF P +I+++++DVVLK
Sbjct: 512 KTMLKDALREKSD-VFNSENPEEDKIKLGEPGWRERYYEEKFGARTPGQIEEIRRDVVLK 570
Query: 479 YVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTL 538
Y EGLCWV YYY+ VCSWQWFYPYHYAPFASDL L L ITF LG PF+PFDQLMG
Sbjct: 571 YTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLSGLGQLNITFELGSPFKPFDQLMGVF 630
Query: 539 PAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQT 598
PAASS ALP +YR LMTD +SPI FYP DF++DMNGKR++WQG+ KLPFIDE LL +
Sbjct: 631 PAASSHALPVQYRQLMTDANSPIIDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLAEI 690
Query: 599 KKLEVFLTEEELFRNSVMLDLLYVHPQHPLYQQITLYCQLYHQLPPQDR--FAWEIDVNA 656
KK+E LT EE RNS+M ++L+V+ HPL I + LP ++R +ID ++
Sbjct: 691 KKVEHTLTPEEARRNSIMFNMLFVNGSHPLSPYIYSLNSKFGHLPDRERNEIKEKIDPSS 750
Query: 657 SGGMNGYIWLCERNGLRSIIPSPVKGLPDIERNQAM 692
SGGMNGYI LC + + SPV GL DI NQ +
Sbjct: 751 SGGMNGYISLCSGDPCPPVFRSPVDGLEDIMDNQVI 786
>gi|391327300|ref|XP_003738141.1| PREDICTED: 5'-3' exoribonuclease 2 homolog [Metaseiulus
occidentalis]
Length = 960
Score = 581 bits (1498), Expect = e-163, Method: Compositional matrix adjust.
Identities = 336/748 (44%), Positives = 433/748 (57%), Gaps = 71/748 (9%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQ-VDGEGVARPVDVSKPNPNGMEFDNLYLDMNGI 59
MGVPAF+RWL+ ++P IV VEE VDG +D SKPNPN +EFDNLYLDMNGI
Sbjct: 1 MGVPAFFRWLSRKFPNIIVHCVEERGHTVDGNQRVN-IDTSKPNPNNVEFDNLYLDMNGI 59
Query: 60 IHPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRR 119
IHPC HP+ KPAP + D++ +IF+YID IF ++RPR+LLY+AIDGVAPRAKMNQQR+RR
Sbjct: 60 IHPCCHPENKPAPKNEDEMMVAIFEYIDRIFSIIRPRRLLYMAIDGVAPRAKMNQQRSRR 119
Query: 120 FRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPET-CDSNVITPGTQFMAVLSAALQYF 178
FRA+K+AAE A RLR+E + G L ++ PE D+N ITPGT FM L+ L Y+
Sbjct: 120 FRASKEAAEKAATISRLRRELQSKGFHLPPEKAPEDHFDTNCITPGTPFMDRLAKCLHYY 179
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
I RLN PGWQ +VILSDANVPGEGEHKIM +IR QR P DPNTRHCL G DADLI
Sbjct: 180 IHDRLNNDPGWQNIEVILSDANVPGEGEHKIMDFIRKQRASPSHDPNTRHCLCGADADLI 239
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
ML LATHE +F+I+RE P Q C +CGQ+GH +C G P D A ++
Sbjct: 240 MLGLATHEPNFTIIREEFK-PNQPRPCELCGQIGHEMKDCMGLPKDI-ASQTKIEKPLGA 297
Query: 299 KKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIRE 358
+ ++ F+ + VL+EYL EL I PF + ER +DD+VFLCFFVGNDFLPH+P+LEIRE
Sbjct: 298 ETEFIFIRLNVLKEYLTKELWIEGLPFKWSIERAIDDWVFLCFFVGNDFLPHLPSLEIRE 357
Query: 359 GAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQI----------FQKR 408
GAI+ L+ +Y+ YLT G +D + + ED+I F++R
Sbjct: 358 GAIDRLVRIYKETIHVKKDYLTKNGFAQMDHCAMILTKLGQAEDEIFRQRQIDEEKFKRR 417
Query: 409 TRIQQAYEYNEAMKLNARRES-------------SEELLQAPVAVAD------------- 442
++ ++ + + R +S +E+L + D
Sbjct: 418 QKVGESRCTPLTLSSSGRIDSVSAWDSRLLTIDYRDEVLSQRRSAMDFSRGLHGGPGIEA 477
Query: 443 --------------------------TVKLGEPGYKERYYADKFEISNPEEIDKVKKDVV 476
V+L E G+KERYY KFE+S E + +V
Sbjct: 478 MLEPEGGAQGQPAKRKAEDLDEEPEDEVRLWEVGWKERYYESKFEVS--PENQSFRHEVA 535
Query: 477 LKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDLEITFFLG-EPFRPFDQLM 535
Y EGLCWV YYYQ SW+WF+PYHYAPFASD ++ L+I+F +PF P +QLM
Sbjct: 536 AAYAEGLCWVLHYYYQGCASWKWFFPYHYAPFASDFSEIGTLKISFEKNTKPFNPMEQLM 595
Query: 536 GTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLL 595
PAAS LPE + +LM DP SPI FYP DF+ID+NGK+ AW GV LPF+DEK LL
Sbjct: 596 SVFPAASRQHLPEPWGDLMEDPESPIIDFYPIDFRIDLNGKKAAWMGVALLPFVDEKRLL 655
Query: 596 RQTKKLEVFLTEEELFRNSVMLDLLYVHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVN 655
+ LT EE RNS +++ HP Y + + Q D ID
Sbjct: 656 ETVATVYDRLTPEEKRRNSRGDSYIFIRKNHPGYPFLRGLYENKSQRKLNDENVQPIDPE 715
Query: 656 ASGGMNGYIWLCERN-GLRSIIPSPVKG 682
+ GM G ++ + + SPVKG
Sbjct: 716 SFFGMAGNALTTDKMVPEKEKVLSPVKG 743
>gi|357126119|ref|XP_003564736.1| PREDICTED: 5'-3' exoribonuclease 3-like [Brachypodium distachyon]
Length = 1061
Score = 578 bits (1491), Expect = e-162, Method: Compositional matrix adjust.
Identities = 295/413 (71%), Positives = 349/413 (84%), Gaps = 1/413 (0%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPAFYRWLA++YP+ +VDVVEE+P PVD SKPNPN +EFDNLYLDMNGII
Sbjct: 1 MGVPAFYRWLAEKYPMVVVDVVEEEPVEIEGVKV-PVDTSKPNPNSLEFDNLYLDMNGII 59
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPCFHP+ +P+PT++ +VF+ +FDYID +F++VRPRKL+Y+AIDGVAPRAKMNQQR+RRF
Sbjct: 60 HPCFHPEDRPSPTTFAEVFQCMFDYIDRLFVMVRPRKLMYMAIDGVAPRAKMNQQRSRRF 119
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQ 180
RAAKDAA+A AEEE+LR+EFE G+ L K + +TCDSNVITPGT+FMAVLS ALQY+I
Sbjct: 120 RAAKDAADAAAEEEKLREEFEREGRKLPPKLQSQTCDSNVITPGTEFMAVLSVALQYYIH 179
Query: 181 ARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
RLN PGW+ KVILSDANVPGEGEHK+MSYIR QRNLPGF+PNTRHCLYGLDADLIML
Sbjct: 180 LRLNYDPGWKQIKVILSDANVPGEGEHKVMSYIRGQRNLPGFNPNTRHCLYGLDADLIML 239
Query: 241 SLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIHKK 300
+LATHE+HFSILREV+ PGQQEKCF+CGQVGHLAA+C GK +++ D + KK
Sbjct: 240 ALATHEVHFSILREVVFTPGQQEKCFLCGQVGHLAAKCEGKAKRKAGEFDEKGDAIVPKK 299
Query: 301 KYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGA 360
YQFLNIW LREY++YE +PNPPF I+ ERI+DDF+F+CFFVGNDFLPHMPTLEIREGA
Sbjct: 300 PYQFLNIWTLREYIEYEFRMPNPPFQIDLERIIDDFIFMCFFVGNDFLPHMPTLEIREGA 359
Query: 361 INLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQ 413
INLLM VY++EF +MGGYLTDA L+RVE FIQ+V YED+IFQKR R+ Q
Sbjct: 360 INLLMAVYKKEFPSMGGYLTDACTPDLNRVEHFIQAVGSYEDKIFQKRARLHQ 412
Score = 315 bits (808), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 157/276 (56%), Positives = 194/276 (70%), Gaps = 3/276 (1%)
Query: 419 EAMKLNARRESSEELLQAPVAVADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLK 478
++M +A RE S+ L + D VKLGEPG++ERYY DKF PE+I+++++DVVLK
Sbjct: 512 KSMLKDALREKSD-LFNSENPEEDKVKLGEPGWRERYYEDKFGARTPEQIEEIRRDVVLK 570
Query: 479 YVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTL 538
Y EGLCWV YYY+ VCSWQWFYPYHYAPFASDLK L +L ITF LG PF+PFDQLMG
Sbjct: 571 YTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKGLGELNITFNLGSPFKPFDQLMGVF 630
Query: 539 PAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQT 598
PAASS ALP +YR LM+DP+SPI FYP DF++DMNGKRF+WQG+ KLPFIDE LL +
Sbjct: 631 PAASSHALPLQYRKLMSDPNSPIIDFYPIDFEVDMNGKRFSWQGIAKLPFIDESRLLAEI 690
Query: 599 KKLEVFLTEEELFRNSVMLDLLYVHPQHPLYQQITLYCQLYHQLPPQDRFAWE--IDVNA 656
KK+E LT EE RNS M ++L+V+ HPL I + LP +R + +D +A
Sbjct: 691 KKVEHTLTPEEARRNSTMYNMLFVNGSHPLSPYIYSLNSKFGHLPDDERNTIKELLDPSA 750
Query: 657 SGGMNGYIWLCERNGLRSIIPSPVKGLPDIERNQAM 692
SGGMNGYI LC + + SPV GL DI NQ +
Sbjct: 751 SGGMNGYISLCGGDPSPPVFRSPVDGLEDIMDNQVI 786
>gi|312089591|ref|XP_003146304.1| hypothetical protein LOAG_10732 [Loa loa]
Length = 686
Score = 576 bits (1485), Expect = e-161, Method: Compositional matrix adjust.
Identities = 315/694 (45%), Positives = 408/694 (58%), Gaps = 95/694 (13%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPAF+RWL +YP IVD VEE P+ D GV PV+ PNPN EFDNLYLDMNGII
Sbjct: 1 MGVPAFFRWLTRKYPSVIVDAVEEKPR-DMNGVRIPVNTVDPNPNFQEFDNLYLDMNGII 59
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ +P+P + +++F IF+YID +F +VRPRKLLY+AIDGVAPRAKMNQQR+RRF
Sbjct: 60 HPCTHPEDRPSPKTEEEMFTLIFEYIDRLFAIVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQ 180
RA+K+A E + R E G L+ AL+Y++
Sbjct: 120 RASKEAIEKVEQIAETRSRLESEG------------------------YPLAVALRYYVH 155
Query: 181 ARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
RLN PGW+ VILSDANVPGEGEHKIM +IR QR P DPNT HCL G DADLIML
Sbjct: 156 QRLNSDPGWEKVAVILSDANVPGEGEHKIMDFIRRQRASPSHDPNTVHCLCGADADLIML 215
Query: 241 SLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIHKK 300
LATHE +F+I+RE +P QQ C +CGQ GH +C G D+ ++ +P+ K+
Sbjct: 216 GLATHEPNFNIIREEF-MPNQQRPCDLCGQYGHDLNDCKGLALDDDSE---CQSSPLQKE 271
Query: 301 -KYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREG 359
+ F+ + VLREYL+ EL IPN P + ER +DD+VF+CFFVGNDFLPH+P+LEIRE
Sbjct: 272 TNFIFVRLPVLREYLERELHIPNSSIPFDLERAIDDWVFMCFFVGNDFLPHLPSLEIREN 331
Query: 360 AINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAY---- 415
AI+ L+ +Y+ M G+LTD+G V ++R + + + ED+IF+ R +Q +
Sbjct: 332 AIDRLVKLYKDMVYEMKGHLTDSGVVHIERAQIILNKLGEVEDEIFKSRQEREQQFKRKN 391
Query: 416 -----------------------------------EYNEAMKLNARRESSE--ELLQAP- 437
AM +R E+ + E L P
Sbjct: 392 KEKKRREKALMTPSYISSRGSFLAPQTNGPICLSGSNTRAMARTSRLEALDFIETLHVPG 451
Query: 438 VAVADT--------------------VKLGEPGYKERYYADKFEISNPEEIDKVKKDVVL 477
++V++ V+L E G+K+RYY KF++ + + ++ V L
Sbjct: 452 ISVSENSCHRHELKDDSSSEDEVFDEVRLWEDGWKDRYYKSKFQVDGKDIV--FRRKVAL 509
Query: 478 KYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDLEITF-FLGEPFRPFDQLMG 536
YVEGLCWV YYYQ SW W+YP+HYAPFASD +S + F EPF+P QLM
Sbjct: 510 AYVEGLCWVLHYYYQGCASWDWYYPFHYAPFASDFDAVSQFKPDFSACTEPFKPLQQLMS 569
Query: 537 TLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLR 596
PAAS LPE ++ LM P+SPI FYP +F ID+NGK+ AWQGV LPF+DEK LL
Sbjct: 570 VFPAASRVHLPEAWQELMISPTSPIIDFYPDNFVIDLNGKKCAWQGVALLPFVDEKRLLE 629
Query: 597 QTKKLEVFLTEEELFRNSVMLDLLYVHPQHPLYQ 630
K +E L E RNS D L+V P HP Y+
Sbjct: 630 VLKPMEDKLDAFEKERNSRGPDRLFVGPSHPFYK 663
>gi|328697664|ref|XP_003240404.1| PREDICTED: 5'-3' exoribonuclease 2 homolog [Acyrthosiphon pisum]
Length = 958
Score = 575 bits (1482), Expect = e-161, Method: Compositional matrix adjust.
Identities = 336/758 (44%), Positives = 455/758 (60%), Gaps = 86/758 (11%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEE-DPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGI 59
MGVPAF+RWL +YP IV+ +E+ V+GE + P+D + PNPNG+EFDNLYLDMNGI
Sbjct: 1 MGVPAFFRWLTRKYPSVIVNCIEQKSTDVNGEQI--PIDSTSPNPNGIEFDNLYLDMNGI 58
Query: 60 IHPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRR 119
IHPC HP+ KPAP D++ +IF+ ID +F +VRPRK+LY+AIDGVAPRAKMNQQR+RR
Sbjct: 59 IHPCTHPENKPAPKDEDEMMVAIFECIDRLFRIVRPRKVLYMAIDGVAPRAKMNQQRSRR 118
Query: 120 FRAAKDAAEAEAEEERLRKEFEEAGKLL-SAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
FRA+K+ E E R+RK EAG +L K+K E DSN ITPGT FM LSA L Y+
Sbjct: 119 FRASKETTEKTEELARVRKNLIEAGAILPPEKQKGEHFDSNCITPGTPFMDKLSACLHYY 178
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
+ RLN PGW+ KVILSDANVPGEGEHKIM ++R QR P DPNT+H L G DADLI
Sbjct: 179 VHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDFVRKQRAQPNHDPNTQHVLCGADADLI 238
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
ML LATHE +F+I+RE P Q + C +CGQ+GH +C G + D + ++ +
Sbjct: 239 MLGLATHEPNFTIIREEFK-PNQPKPCDMCGQMGHEIKDCQGLEREAFNDGSTIEFSA-- 295
Query: 299 KKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIRE 358
++ F+ + VLREYL+ EL++PN PF FER +DD+VF+CFFVGNDFLPH+P+LEIRE
Sbjct: 296 DVQFIFVRLNVLREYLERELEMPNLPFKYEFERALDDWVFMCFFVGNDFLPHLPSLEIRE 355
Query: 359 GAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYEYN 418
AI+ L+ +Y++ GG+LT +G+V LDRV+ + + + ED+IF+KR + ++ +
Sbjct: 356 NAIDRLVSLYKKTVYKTGGFLTASGDVNLDRVQLIMSDLGMAEDEIFKKRQQTEKMFA-- 413
Query: 419 EAMKLNARRESSEELLQAPVAVADTVKLGEPGYKERYYADKFEISNPEE-IDKVKKDVV- 476
+ KL RRE ++L+++ A + V G+ Y F ISNP + +D++++ V
Sbjct: 414 DRNKLKKRREKQDKLMRSKSA-PNFVLGGQ--YAPSAPNTAFSISNPRQTVDEMRRQSVG 470
Query: 477 -----------------------------------LKYVEGLCWVCRY-----------Y 490
+Y E V R Y
Sbjct: 471 NENNQGVKRKRDDNESSDEEKETPDEVRLWEDGFKERYYESKFDVDRTNSGFRHQVALEY 530
Query: 491 YQDVCSW--QWFY----------PYHYAPFASDLKDLSDLEITFFLGE-PFRPFDQLMGT 537
+ +C W Q++Y PYHYAPFASD ++S + F G PFRP +QLM
Sbjct: 531 VRGLC-WVLQYYYQGCPSWKWYFPYHYAPFASDFLNISAVSTKFEKGTVPFRPLEQLMSV 589
Query: 538 LPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQ 597
PAASS+ +P+ + LM+DP SPI FYP DF+ID+NGK+FAWQGV LPF++E L +
Sbjct: 590 FPAASSNHVPQPWAILMSDPESPIIDFYPVDFKIDLNGKKFAWQGVALLPFVEEARLHKA 649
Query: 598 TKKLEVFLTEEELFRNSVMLDLLYVHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVNAS 657
+ LT EE RN +D LY+ + Y+ L +LY +D + V
Sbjct: 650 LEPYYDLLTSEERRRNVKGMDRLYIQQDNSKYE---LLKELYLN---KDNYENLTSV-LI 702
Query: 658 GGMNGYIWL---CERNGLRSIIPSPVKGLPDIERNQAM 692
GM G I L C + G +PSPV GL + NQ +
Sbjct: 703 DGMEGKIMLADDCVKIG--GSLPSPVMGLNVVRSNQVI 738
>gi|296423651|ref|XP_002841367.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295637604|emb|CAZ85558.1| unnamed protein product [Tuber melanosporum]
Length = 883
Score = 559 bits (1440), Expect = e-156, Method: Compositional matrix adjust.
Identities = 305/702 (43%), Positives = 420/702 (59%), Gaps = 67/702 (9%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPA +RWL ++YP + V+EE PQ + +GV R VD ++PNPNG E DNLYLDMNGI+
Sbjct: 1 MGVPALFRWLTNKYPKIVSPVIEEQPQ-EIDGVVRAVDTTQPNPNG-ESDNLYLDMNGIV 58
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ P + + + ++F Y + + +VRP KLL +A+DGVAPRAKMNQQR+RRF
Sbjct: 59 HPCSHPEEGEPPATEEAMMLAVFAYTERVVNMVRPNKLLMIAVDGVAPRAKMNQQRSRRF 118
Query: 121 RAAKDAAEAEAEEERLRKEFEEAG-KLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFI 179
R+A++A E E E +L ++ E+ G K + + DSN ITPGT FM +L+A+L+Y+I
Sbjct: 119 RSAQEAKEKEDETAQLIEQMEKHGSKFDDVIKNKKIWDSNAITPGTPFMDILAASLKYWI 178
Query: 180 QARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIM 239
+LN P W K+I+SD+ VPGEGEHKIM +IR QR P +DPNTRH +YGLDADLIM
Sbjct: 179 AKKLNDDPAWAKLKIIISDSTVPGEGEHKIMEFIRSQRLSPEYDPNTRHVIYGLDADLIM 238
Query: 240 LSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIHK 299
L L THE HF +LRE + A E K
Sbjct: 239 LGLGTHEPHFKVLREDV-----------------FAKEARAK------------------ 263
Query: 300 KKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREG 359
+ N L+ + + ER +DD++F+CFFVGNDFLPH+P+LEIRE
Sbjct: 264 -TCRIYNASPLKPFFE-------------LERALDDWIFMCFFVGNDFLPHLPSLEIREN 309
Query: 360 AINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYEYNE 419
I+ L+ V++ MGGY+T G V L RV+ + +A EDQIF+ R R
Sbjct: 310 GIDTLIAVWKDNIPLMGGYVTKDGTVDLKRVQYILDGLAKQEDQIFRNRKRTISTTAPAI 369
Query: 420 AMKLNARRESSEELLQAPVAVA-------DTVKLGEPGYKERYYADKFEISNPEEIDKVK 472
+ K A +E + P + + D V+L EPGY+ERYY KF +S P+ ++ +
Sbjct: 370 SHKRKADMVWGDETPKTPGSESEADDPDRDPVRLWEPGYRERYYEQKFHVS-PDNVE-FR 427
Query: 473 KDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDLEITFFLGEPFRPFD 532
V YVEGLCWV YY+Q SW W+YPYHYAPFA D D+ L+I F G+PF+PF+
Sbjct: 428 NKVAASYVEGLCWVLLYYFQGCPSWTWYYPYHYAPFAQDFNDVGKLDIQFKKGKPFKPFE 487
Query: 533 QLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEK 592
QLMG LPAAS ALPE ++ LMT+ S I FYP F ID+NGK+FAWQGV LPFIDEK
Sbjct: 488 QLMGVLPAASKHALPEPFQKLMTEEDSEIIDFYPESFPIDLNGKKFAWQGVALLPFIDEK 547
Query: 593 LLLRQTKKLEVFLTEEELFRNSVMLDLLYVHPQHPLYQQITLYCQLYHQLPPQDRFAWEI 652
LL K+ LT E+ RN++ DLL+ ++ +Y + + + Y++ D + ++
Sbjct: 548 RLLDAVSKVYPTLTPEDDARNAMGHDLLFCSVENDMYDDVAI--RFYYKGRSDDEY--DL 603
Query: 653 DVNASGGMNGYIWLCERNGLRSIIPSP--VKGLPDIERNQAM 692
D S G++G + + IP P ++ +P IE ++++
Sbjct: 604 DPTKSQGLSGKVIKDPAFIPQGTIPFPLSLEDMPKIEGDKSL 645
>gi|22531090|gb|AAM97049.1| unknown protein [Arabidopsis thaliana]
gi|23197934|gb|AAN15494.1| unknown protein [Arabidopsis thaliana]
Length = 763
Score = 558 bits (1437), Expect = e-156, Method: Compositional matrix adjust.
Identities = 293/449 (65%), Positives = 355/449 (79%), Gaps = 5/449 (1%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP+FYRWLA++YPL + DV+EE+ V+ EG+ PVD SKPNPN +E+DNLYLDMNGII
Sbjct: 1 MGVPSFYRWLAEKYPLLVADVIEEE-PVEIEGIKIPVDTSKPNPNNLEYDNLYLDMNGII 59
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPCFHP+ +P+PT++++VF+ +FDYID +F++VRPRKLLY+AIDGVAPRAKMNQQR+RRF
Sbjct: 60 HPCFHPEDRPSPTTFEEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQ 180
R+AKDA++A AEEERLR+EFE G+ L K + DSNVITPGT+FM VLS ALQY++
Sbjct: 120 RSAKDASDAAAEEERLREEFEREGRRLPPKVDSQVFDSNVITPGTEFMGVLSIALQYYVH 179
Query: 181 ARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
RLN GW+ KVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML
Sbjct: 180 LRLNHDVGWKNIKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 239
Query: 241 SLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNP--ADWNGVDDTPIH 298
LATHE+HFSILREV+ PGQQE+CF+CGQ+GH A+ C GKP +D G D
Sbjct: 240 GLATHEVHFSILREVVYTPGQQERCFLCGQMGHFASNCEGKPKKRAGESDEKG-DGNDFV 298
Query: 299 KKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIRE 358
KK YQFL+IWVLREYL+ E+ IPNPPF I+ ERIVDDF+F+CFFVGNDFLPHMPTLEIRE
Sbjct: 299 KKPYQFLHIWVLREYLELEMRIPNPPFEIDLERIVDDFIFICFFVGNDFLPHMPTLEIRE 358
Query: 359 GAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYEYN 418
GAINLLM VY++EF + GYLTD + L RVE+FIQ+V +ED+IFQKR +Q +
Sbjct: 359 GAINLLMAVYKKEFRSFDGYLTDGCKPNLKRVEQFIQAVGSFEDKIFQKRA-MQHQRQAE 417
Query: 419 EAMKLNARRESSEELLQAPVAVADTVKLG 447
+ A + + +AP D V +
Sbjct: 418 RVKRDKAGKATKRMDDEAPTVQPDLVPVA 446
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 127/228 (55%), Positives = 166/228 (72%), Gaps = 1/228 (0%)
Query: 427 RESSEELLQAPVAVADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWV 486
RE S+ + D VKLG+PG++ERYY +KF + PEE+++V+KDVVLKY EGLCWV
Sbjct: 515 REKSDAF-NSDTTEEDKVKLGQPGWRERYYEEKFSVVTPEEMERVRKDVVLKYTEGLCWV 573
Query: 487 CRYYYQDVCSWQWFYPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSAL 546
YY + VCSWQWFYPYHYAPFASDLKDL +++I F LG PF+PF+QL+G PAASS AL
Sbjct: 574 MHYYMEGVCSWQWFYPYHYAPFASDLKDLGEMDIKFELGTPFKPFNQLLGVFPAASSHAL 633
Query: 547 PEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLT 606
PE+YR LMTDP+SPI FYP DF++DMNGKRF+WQG+ KLPFIDE+ LL ++E LT
Sbjct: 634 PERYRTLMTDPNSPIIDFYPTDFEVDMNGKRFSWQGIAKLPFIDERRLLEAVSEVEFTLT 693
Query: 607 EEELFRNSVMLDLLYVHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDV 654
+EE RNS M D+L++ H L + + QL ++R +++ +
Sbjct: 694 DEEKRRNSRMCDMLFIATSHRLAELVFSLDNHCRQLSARERVDFKVKI 741
>gi|9369381|gb|AAF87130.1|AC006434_26 F10A5.15 [Arabidopsis thaliana]
Length = 1037
Score = 557 bits (1435), Expect = e-156, Method: Compositional matrix adjust.
Identities = 293/451 (64%), Positives = 357/451 (79%), Gaps = 9/451 (1%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP+FYRWLA++YPL + DV+EE+ V+ EG+ PVD SKPNPN +E+DNLYLDMNGII
Sbjct: 1 MGVPSFYRWLAEKYPLLVADVIEEE-PVEIEGIKIPVDTSKPNPNNLEYDNLYLDMNGII 59
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPCFHP+ +P+PT++++VF+ +FDYID +F++VRPRKLLY+AIDGVAPRAKMNQQR+RRF
Sbjct: 60 HPCFHPEDRPSPTTFEEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQ 180
R+AKDA++A AEEERLR+EFE G+ L K + DSNVITPGT+FM VLS ALQY++
Sbjct: 120 RSAKDASDAAAEEERLREEFEREGRRLPPKVDSQVFDSNVITPGTEFMGVLSIALQYYVH 179
Query: 181 ARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
RLN GW+ KVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML
Sbjct: 180 LRLNHDVGWKNIKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 239
Query: 241 SLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKP----GDNPADWNGVDDTP 296
LATHE+HFSILREV+ PGQQE+CF+CGQ+GH A+ C GKP G++ +G D
Sbjct: 240 GLATHEVHFSILREVVYTPGQQERCFLCGQMGHFASNCEGKPKKRAGESDEKGDGND--- 296
Query: 297 IHKKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEI 356
KK YQFL+IWVLREYL+ E+ IPNPPF I+ ERIVDDF+F+CFFVGNDFLPHMPTLEI
Sbjct: 297 FVKKPYQFLHIWVLREYLELEMRIPNPPFEIDLERIVDDFIFICFFVGNDFLPHMPTLEI 356
Query: 357 REGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYE 416
REGAINLLM VY++EF + GYLTD + L RVE+FIQ+V +ED+IFQKR +Q +
Sbjct: 357 REGAINLLMAVYKKEFRSFDGYLTDGCKPNLKRVEQFIQAVGSFEDKIFQKRA-MQHQRQ 415
Query: 417 YNEAMKLNARRESSEELLQAPVAVADTVKLG 447
+ A + + +AP D V +
Sbjct: 416 AERVKRDKAGKATKRMDDEAPTVQPDLVPVA 446
Score = 291 bits (745), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 141/284 (49%), Positives = 186/284 (65%), Gaps = 19/284 (6%)
Query: 427 RESSEELLQAPVAVADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWV 486
RE S+ + D VKLG+PG++ERYY +KF + PEE+++V+KDVVLKY EGLCWV
Sbjct: 515 REKSDAF-NSDTTEEDKVKLGQPGWRERYYEEKFSVVTPEEMERVRKDVVLKYTEGLCWV 573
Query: 487 CRYYYQDVCSWQWFYPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSAL 546
YY + VCSWQWFYPYHYAPFASDLKDL +++I F LG PF+PF+QL+G PAASS AL
Sbjct: 574 MHYYMEGVCSWQWFYPYHYAPFASDLKDLGEMDIKFELGTPFKPFNQLLGVFPAASSHAL 633
Query: 547 PEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLT 606
PE+YR LMTDP+SPI FYP DF++DMNGKRF+WQG+ KLPFIDE+ LL ++E LT
Sbjct: 634 PERYRTLMTDPNSPIIDFYPTDFEVDMNGKRFSWQGIAKLPFIDERRLLEAVSEVEFTLT 693
Query: 607 EEELFRNSVMLDLLYVHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDV------------ 654
+EE RNS M D+L++ H L + + QL ++R +++ +
Sbjct: 694 DEEKRRNSRMCDMLFIATSHRLAELVFSLDNHCRQLSARERVDFKVKIKPKLRPTNTKLF 753
Query: 655 ------NASGGMNGYIWLCERNGLRSIIPSPVKGLPDIERNQAM 692
S GMNGY+ C + SP++G+ DI NQ +
Sbjct: 754 PDVLITTCSDGMNGYLTPCSGETHPPVFRSPMEGMEDILTNQVI 797
>gi|73991017|ref|XP_534324.2| PREDICTED: 5'-3' exoribonuclease 2 isoform 2 [Canis lupus
familiaris]
Length = 950
Score = 556 bits (1432), Expect = e-155, Method: Compositional matrix adjust.
Identities = 328/763 (42%), Positives = 437/763 (57%), Gaps = 83/763 (10%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPAF+RWL+ +YP IV+ VEE P+ + GV PVD SKPNPN +EFDNLYLDMNGII
Sbjct: 1 MGVPAFFRWLSRKYPSIIVNCVEEKPK-ECNGVKIPVDASKPNPNDVEFDNLYLDMNGII 59
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ KPAP + D++ +IF+YID +F +VRPR+LLY+AIDGVAPRAKMNQQR+RRF
Sbjct: 60 HPCTHPEDKPAPKNEDEMMVAIFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRF 119
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQ 180
RA+K+ EA E++R+R+E G L +E E DSN ITPGT+FM L+ L+Y+I
Sbjct: 120 RASKEGMEAAVEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIA 179
Query: 181 ARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
RLN PGW+ VILSDA+ PGEGEHKIM YIR QR P DPNT HCL G DADLIML
Sbjct: 180 DRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIML 239
Query: 241 SLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDT-PIHK 299
LATHE +F+I+RE P + + C +C Q GH +C G P + + + D+ P +
Sbjct: 240 GLATHEPNFTIIREEFK-PNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADSLPCAE 298
Query: 300 KKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREG 359
++ FL + VLREYL+ EL + + PF + ER +DD+VF+CFFVGNDFLPH+P+LEIREG
Sbjct: 299 GEFIFLRLNVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREG 358
Query: 360 AINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYEYNE 419
AI+ L+++Y+ GGYLT++G V L RV+ + +V ED IF+KR + ++ +
Sbjct: 359 AIDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSFRRRQ 418
Query: 420 AM---------------------KLNARRESSEELLQAPVAVADTVKLGEPGYKERYYAD 458
L +R ++ P A +++
Sbjct: 419 KEKRKRMKRDQPAFSPGGILTPHALGSRNSPGSQVASNPRQAAYEMRMQNNSSPSISPNT 478
Query: 459 KFEI-SNPEEIDKVKK------------DVVLKYVEGLCWVCRYY--------------- 490
F +P I +K+ D V + G W RYY
Sbjct: 479 SFTSDGSPSPIGGIKRKAEDSDSEPEPEDNVRLWEAG--WKQRYYKNKFDVDAADEKFRR 536
Query: 491 -----YQDVCSWQWFYPYH-------YAPF-----ASDLKDLSDLEITFFLG-EPFRPFD 532
Y + W Y Y Y PF ASD + ++D+ F G +PF+P +
Sbjct: 537 KVVQSYVEGLCWVLRYYYQGCASWKWYYPFHYAPFASDFEGIADMPSDFEKGTKPFKPLE 596
Query: 533 QLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEK 592
QLMG PAAS + LP +R LM+DP S I FYP DF ID+NGK++AWQGV LPF+DE+
Sbjct: 597 QLMGVFPAASGNFLPPSWRKLMSDPDSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDER 656
Query: 593 LLLRQTKKLEVFLTEEELFRNSVMLDLLYVHPQHPLYQQITLYCQLYHQLPPQDRFAWEI 652
L +++ LT EE RNS+ D+L+V HPL+ I Q P +
Sbjct: 657 RLRAALEEVYPDLTPEETKRNSLGGDVLFVGKHHPLHDFILELYQTGSTEP--------V 708
Query: 653 DV--NASGGMNGYIWLCERNGL-RSIIPSPVKGLPDIERNQAM 692
DV G+ G L E L I+ SPV L D+ +N A+
Sbjct: 709 DVPPELCHGIQGKFSLDEEAVLPDQIVCSPVPMLRDLTQNAAI 751
>gi|18410905|ref|NP_565114.1| 5'-3' exoribonuclease 3 [Arabidopsis thaliana]
gi|75262832|sp|Q9FQ03.1|XRN3_ARATH RecName: Full=5'-3' exoribonuclease 3; AltName: Full=Protein
EXORIBONUCLEASE 3
gi|11875628|gb|AAG40732.1|AF286719_1 XRN3 [Arabidopsis thaliana]
gi|332197621|gb|AEE35742.1| 5'-3' exoribonuclease 3 [Arabidopsis thaliana]
Length = 1020
Score = 556 bits (1432), Expect = e-155, Method: Compositional matrix adjust.
Identities = 293/448 (65%), Positives = 356/448 (79%), Gaps = 9/448 (2%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP+FYRWLA++YPL + DV+EE+ V+ EG+ PVD SKPNPN +E+DNLYLDMNGII
Sbjct: 1 MGVPSFYRWLAEKYPLLVADVIEEE-PVEIEGIKIPVDTSKPNPNNLEYDNLYLDMNGII 59
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPCFHP+ +P+PT++++VF+ +FDYID +F++VRPRKLLY+AIDGVAPRAKMNQQR+RRF
Sbjct: 60 HPCFHPEDRPSPTTFEEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQ 180
R+AKDA++A AEEERLR+EFE G+ L K + DSNVITPGT+FM VLS ALQY++
Sbjct: 120 RSAKDASDAAAEEERLREEFEREGRRLPPKVDSQVFDSNVITPGTEFMGVLSIALQYYVH 179
Query: 181 ARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
RLN GW+ KVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML
Sbjct: 180 LRLNHDVGWKNIKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 239
Query: 241 SLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKP----GDNPADWNGVDDTP 296
LATHE+HFSILREV+ PGQQE+CF+CGQ+GH A+ C GKP G++ +G D
Sbjct: 240 GLATHEVHFSILREVVYTPGQQERCFLCGQMGHFASNCEGKPKKRAGESDEKGDGND--- 296
Query: 297 IHKKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEI 356
KK YQFL+IWVLREYL+ E+ IPNPPF I+ ERIVDDF+F+CFFVGNDFLPHMPTLEI
Sbjct: 297 FVKKPYQFLHIWVLREYLELEMRIPNPPFEIDLERIVDDFIFICFFVGNDFLPHMPTLEI 356
Query: 357 REGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYE 416
REGAINLLM VY++EF + GYLTD + L RVE+FIQ+V +ED+IFQKR +Q +
Sbjct: 357 REGAINLLMAVYKKEFRSFDGYLTDGCKPNLKRVEQFIQAVGSFEDKIFQKRA-MQHQRQ 415
Query: 417 YNEAMKLNARRESSEELLQAPVAVADTV 444
+ A + + +AP D V
Sbjct: 416 AERVKRDKAGKATKRMDDEAPTVQPDLV 443
Score = 297 bits (760), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 143/268 (53%), Positives = 185/268 (69%), Gaps = 3/268 (1%)
Query: 427 RESSEELLQAPVAVADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWV 486
RE S+ + D VKLG+PG++ERYY +KF + PEE+++V+KDVVLKY EGLCWV
Sbjct: 515 REKSD-AFNSDTTEEDKVKLGQPGWRERYYEEKFSVVTPEEMERVRKDVVLKYTEGLCWV 573
Query: 487 CRYYYQDVCSWQWFYPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSAL 546
YY + VCSWQWFYPYHYAPFASDLKDL +++I F LG PF+PF+QL+G PAASS AL
Sbjct: 574 MHYYMEGVCSWQWFYPYHYAPFASDLKDLGEMDIKFELGTPFKPFNQLLGVFPAASSHAL 633
Query: 547 PEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLT 606
PE+YR LMTDP+SPI FYP DF++DMNGKRF+WQG+ KLPFIDE+ LL ++E LT
Sbjct: 634 PERYRTLMTDPNSPIIDFYPTDFEVDMNGKRFSWQGIAKLPFIDERRLLEAVSEVEFTLT 693
Query: 607 EEELFRNSVMLDLLYVHPQHPLYQQITLYCQLYHQLPPQDR--FAWEIDVNASGGMNGYI 664
+EE RNS M D+L++ H L + + QL ++R F +I S GMNGY+
Sbjct: 694 DEEKRRNSRMCDMLFIATSHRLAELVFSLDNHCRQLSARERVDFKVKIKPKLSDGMNGYL 753
Query: 665 WLCERNGLRSIIPSPVKGLPDIERNQAM 692
C + SP++G+ DI NQ +
Sbjct: 754 TPCSGETHPPVFRSPMEGMEDILTNQVI 781
>gi|291388948|ref|XP_002710988.1| PREDICTED: 5'-3' exoribonuclease 2 [Oryctolagus cuniculus]
Length = 950
Score = 556 bits (1432), Expect = e-155, Method: Compositional matrix adjust.
Identities = 329/763 (43%), Positives = 440/763 (57%), Gaps = 83/763 (10%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPAF+RWL+ +YP IV+ VEE P+ + GV PVD SKPNPN +EFDNLYLDMNGII
Sbjct: 1 MGVPAFFRWLSRKYPSIIVNCVEEKPK-ECNGVKIPVDASKPNPNDVEFDNLYLDMNGII 59
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ KPAP + D++ +IF+YID +F +VRPR+LLY+AIDGVAPRAKMNQQR+RRF
Sbjct: 60 HPCTHPEDKPAPKNEDEMMVAIFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRF 119
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQ 180
RA+K+ EA E++R+R+E G L +E E DSN ITPGT+FM L+ L+Y+I
Sbjct: 120 RASKEGMEAAVEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIA 179
Query: 181 ARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
RLN PGW+ VILSDA+ PGEGEHKIM YIR QR P DPNT HCL G DADLIML
Sbjct: 180 DRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIML 239
Query: 241 SLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDT-PIHK 299
LATHE +F+I+RE P + + C +C Q GH +C G P + + + D+ P +
Sbjct: 240 GLATHEPNFTIIREEFK-PNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADSLPCAE 298
Query: 300 KKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREG 359
++ FL + VLREYL+ EL + + PF + ER +DD+VF+CFFVGNDFLPH+P+LEIREG
Sbjct: 299 GEFIFLRLNVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREG 358
Query: 360 AINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYEYNE 419
AI+ L+++Y+ GGYLT++G V L RV+ + +V ED IF+KR + ++ +
Sbjct: 359 AIDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSFRRRQ 418
Query: 420 AM---------------------KLNARRESSEELLQAPVAVADTVKLGEPGYKERYYAD 458
L +R ++ P A +++
Sbjct: 419 KEKRKRMKRDQPAFTPSGILTPHALGSRNSPGSQVASNPRQAAYEMRMQNNSSPSISPNT 478
Query: 459 KFEI-SNPEEIDKVKK------------DVVLKYVEGLCWVCRYY--------------- 490
F +P I +K+ D V + G W RYY
Sbjct: 479 SFTSDGSPSPIGGIKRKAEDSDSEPEPEDNVRLWEAG--WKQRYYKNKFDVDAADEKFRR 536
Query: 491 -----YQDVCSWQWFYPYH-------YAPF-----ASDLKDLSDLEITFFLG-EPFRPFD 532
Y + W Y Y Y PF ASD + ++D+ F G +PF+P +
Sbjct: 537 KVVQSYVEGLCWVLRYYYQGCASWKWYYPFHYAPFASDFEGIADMPSDFEKGTKPFKPLE 596
Query: 533 QLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEK 592
QLMG PAAS + LP +R LM+DP S I FYP DF ID+NGK++AWQGV LPF+DE+
Sbjct: 597 QLMGVFPAASGNFLPPSWRKLMSDPDSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDER 656
Query: 593 LLLRQTKKLEVFLTEEELFRNSVMLDLLYVHPQHPLYQQITLYCQLYHQLPPQDRFAWEI 652
L +++ LT EE RNS+ D+L+V HPL+ I +LY Q A +
Sbjct: 657 RLRAALEEVYPDLTPEENRRNSLGGDVLFVGKHHPLHDFI---LELY-----QTGSAEPV 708
Query: 653 DV--NASGGMNGYIWLCERNGL-RSIIPSPVKGLPDIERNQAM 692
DV G+ G L E L ++ SPV L D+ +N A+
Sbjct: 709 DVPPELCHGIQGKFSLDEEAILPDQVVCSPVPMLRDLTQNTAI 751
>gi|395851965|ref|XP_003798517.1| PREDICTED: 5'-3' exoribonuclease 2 isoform 1 [Otolemur garnettii]
Length = 951
Score = 554 bits (1427), Expect = e-155, Method: Compositional matrix adjust.
Identities = 327/764 (42%), Positives = 440/764 (57%), Gaps = 84/764 (10%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPAF+RWL+ +YP IV+ VEE + + GV PVD SKPNPN +EFDNLYLDMNGII
Sbjct: 1 MGVPAFFRWLSRKYPSIIVNCVEEKSK-ECNGVKIPVDASKPNPNDVEFDNLYLDMNGII 59
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ KPAP + D++ +IF+YID +F +VRPR+LLY+AIDGVAPRAKMNQQR+RRF
Sbjct: 60 HPCTHPEDKPAPKNEDEMMVAIFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRF 119
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQ 180
RA+K+ EA E++R+R+E G L +E E DSN ITPGT+FM L+ L+Y+I
Sbjct: 120 RASKEGMEAALEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIA 179
Query: 181 ARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
RLN PGW+ VILSDA+VPGEGEHKIM YIR QR P DPNT HCL G DADLIML
Sbjct: 180 DRLNNDPGWENLTVILSDASVPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIML 239
Query: 241 SLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDT-PIHK 299
LATHE +F+I+RE P + + C +C Q GH +C G P + + + D+ P +
Sbjct: 240 GLATHEPNFTIIREEFK-PNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADSLPCAE 298
Query: 300 KKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREG 359
++ FL + VLREYL+ EL + + PF + ER +DD+VF+CFFVGNDFLPH+P+LEIREG
Sbjct: 299 GEFIFLRLNVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREG 358
Query: 360 AINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYEYNE 419
AI+ L+++Y+ GGYLT++G V L RV+ + +V ED IF+KR + ++ +
Sbjct: 359 AIDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSFRRRQ 418
Query: 420 AM---------------------KLNARRESSEELLQAPVAVADTVKLGEPGYKERYYAD 458
L++R ++ P A +++ +
Sbjct: 419 KEKRKRMKRDQPAFTPSGILTPHALSSRNSPGSQVASNPRHAAYEMRMQNNNCSPSISPN 478
Query: 459 KFEISN--PEEIDKVKK------------DVVLKYVEGLCWVCRYY-------------- 490
S+ P + +K+ D V + G W RYY
Sbjct: 479 TSFTSDGSPSPVGGIKRKAEDSDSEPEPEDNVRLWEAG--WKQRYYKNKFDVDAADEKFR 536
Query: 491 ------YQDVCSWQWFYPYH-------YAPF-----ASDLKDLSDLEITFFLG-EPFRPF 531
Y + W Y Y Y PF ASD + ++D+ F G +PF+P
Sbjct: 537 RKVVQSYVEGLCWVLRYYYQGCASWKWYYPFHYAPFASDFEGIADMPSDFEKGTKPFKPL 596
Query: 532 DQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDE 591
+QLMG PAAS + LP +R LM+DP S I FYP DF ID+NGK++AWQGV LPF+DE
Sbjct: 597 EQLMGVFPAASGNFLPPSWRKLMSDPDSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDE 656
Query: 592 KLLLRQTKKLEVFLTEEELFRNSVMLDLLYVHPQHPLYQQITLYCQLYHQLPPQDRFAWE 651
+ L +++ LT EE RNS+ D+L+V +HPL+ I Q P
Sbjct: 657 RRLRAALEEVYPDLTPEETKRNSLGSDVLFVGKRHPLHDFIVELYQTGSTEP-------- 708
Query: 652 IDV--NASGGMNGYIWLCERNGL-RSIIPSPVKGLPDIERNQAM 692
+DV G+ G L E L I+ SPV L D+ +N A+
Sbjct: 709 VDVPPELCHGIQGKFSLDEEAILPDQIVCSPVPMLRDLTQNTAV 752
>gi|195577157|ref|XP_002078439.1| GD23438 [Drosophila simulans]
gi|194190448|gb|EDX04024.1| GD23438 [Drosophila simulans]
Length = 842
Score = 553 bits (1425), Expect = e-154, Method: Compositional matrix adjust.
Identities = 308/681 (45%), Positives = 404/681 (59%), Gaps = 64/681 (9%)
Query: 56 MNGIIHPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQ 115
MNGIIHPC HP+ KPAP + D++ +IF+ ID +F +VRPRKLLY+AIDGVAPRAKMNQQ
Sbjct: 1 MNGIIHPCTHPEDKPAPKNEDEMMVAIFECIDRLFGIVRPRKLLYMAIDGVAPRAKMNQQ 60
Query: 116 RTRRFRAAKDAAEAEAEEERLRKEFEEAG-KLLSAKEKPETCDSNVITPGTQFMAVLSAA 174
R+RRFRAAK+ E E R+R+E G KL KEK + DSN ITPGT FM LS
Sbjct: 61 RSRRFRAAKETTEKRLEVARIREELLSRGCKLPPEKEKGDHFDSNCITPGTPFMDRLSKC 120
Query: 175 LQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLD 234
L YF+ RLN P W+ KVILSDANVPGEGEHKIM YIR QR P DPNT+H L G D
Sbjct: 121 LHYFVHDRLNNNPAWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHVLCGAD 180
Query: 235 ADLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDD 294
ADLIML LATHE +F+I+RE LP + C +C GH +C G P N D
Sbjct: 181 ADLIMLGLATHEPNFTIIREEF-LPNKPRPCDICNGFGHEMDKCVGLGATAPTSANFKPD 239
Query: 295 TPIHKK-KYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPT 353
PI + K+ F+ + VLREYL+ L++PN PF +FER +DD+VF+CFFVGNDFLPH+P+
Sbjct: 240 VPIGAEVKFIFVRLSVLREYLKQTLEMPNLPFEYSFERALDDWVFMCFFVGNDFLPHLPS 299
Query: 354 LEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQ 413
LEIREGA++ L+ +Y++ GYLTD+G+V LDRV+ + + EDQIF+ R R ++
Sbjct: 300 LEIREGAVDRLVELYKKCVYKTKGYLTDSGDVNLDRVQLIMTDLGNAEDQIFKSRQRREE 359
Query: 414 AYE-YNEAMKLNARRESSEELLQAPVAVA------------------------------- 441
++ ++A K R + L Q+ +
Sbjct: 360 QFKARDKARKRQERNQDHGSLNQSAFGASAVGPNSQQKSVGNYKEEAAALRNRKRTSDMA 419
Query: 442 -----------DTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYY 490
D V+L E G+K+RYY KF+++ + + + V L+YV GLCWV +YY
Sbjct: 420 NLDDEDEEENNDEVRLWEDGFKDRYYESKFDVAPGNQ--QFRYAVALQYVRGLCWVLKYY 477
Query: 491 YQDVCSWQWFYPYHYAPFASDLKDLSDLEITFFLG-EPFRPFDQLMGTLPAASSSALPEK 549
YQ SW W++PYHYAPFASD ++ L F G +PF P +QLMG PAASSS +PE
Sbjct: 478 YQGCASWNWYFPYHYAPFASDFVNIQGLSTMFEKGTKPFNPLEQLMGVFPAASSSHVPEP 537
Query: 550 YRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEE 609
+ LM+DP SPI FYP DF+ID+NG+ + LPF+DEK L + LT EE
Sbjct: 538 WAKLMSDPESPIIDFYPEDFKIDLNGR------MALLPFVDEKRLFKALVPYYDQLTGEE 591
Query: 610 LFRNSVMLDLLYVHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVNASGGMNGYIWLCER 669
+ RN + LY+ Q P Y+++ + + I + GM G + E
Sbjct: 592 VKRNKRGDNYLYISNQSPHYKKVKKVSE-----KDDESVCKAISFD---GMRGTLGSTEL 643
Query: 670 N-GLRSIIPSPVKGLPDIERN 689
N + I+ SP+ GL DI N
Sbjct: 644 NTAISGILKSPISGLSDINDN 664
>gi|18860916|ref|NP_036387.2| 5'-3' exoribonuclease 2 [Homo sapiens]
gi|30173484|sp|Q9H0D6.1|XRN2_HUMAN RecName: Full=5'-3' exoribonuclease 2; AltName: Full=DHM1-like
protein; Short=DHP protein
gi|12053189|emb|CAB66775.1| hypothetical protein [Homo sapiens]
gi|119630591|gb|EAX10186.1| 5'-3' exoribonuclease 2, isoform CRA_a [Homo sapiens]
gi|182888117|gb|AAI60100.1| 5'-3' exoribonuclease 2 [synthetic construct]
Length = 950
Score = 552 bits (1422), Expect = e-154, Method: Compositional matrix adjust.
Identities = 324/761 (42%), Positives = 434/761 (57%), Gaps = 79/761 (10%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPAF+RWL+ +YP IV+ VEE P+ + GV PVD SKPNPN +EFDNLYLDMNGII
Sbjct: 1 MGVPAFFRWLSRKYPSIIVNCVEEKPK-ECNGVKIPVDASKPNPNDVEFDNLYLDMNGII 59
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ KPAP + D++ +IF+YID +F +VRPR+LLY+AIDGVAPRAKMNQQR+RRF
Sbjct: 60 HPCTHPEDKPAPKNEDEMMVAIFEYIDRLFSIVRPRRLLYMAIDGVAPRAKMNQQRSRRF 119
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQ 180
RA+K+ EA E++R+R+E G L +E E DSN ITPGT+FM L+ L+Y+I
Sbjct: 120 RASKEGMEAAVEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIA 179
Query: 181 ARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
RLN PGW+ VILSDA+ PGEGEHKIM YIR QR P DPNT HCL G DADLIML
Sbjct: 180 DRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIML 239
Query: 241 SLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDT-PIHK 299
LATHE +F+I+RE P + + C +C Q GH +C G P + + + D+ P +
Sbjct: 240 GLATHEPNFTIIREEFK-PNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADSLPCAE 298
Query: 300 KKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREG 359
++ FL + VLREYL+ EL + + PF + ER +DD+VF+CFFVGNDFLPH+P+LEIRE
Sbjct: 299 GEFIFLRLNVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREN 358
Query: 360 AINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYEYNE 419
AI+ L+++Y+ GGYLT++G V L RV+ + +V ED IF+KR + ++ +
Sbjct: 359 AIDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSFRRRQ 418
Query: 420 AM---------------------KLNARRESSEELLQAPVAVADTVKLGEPGYKERYYAD 458
L +R ++ P A +++
Sbjct: 419 KEKRKRMKRDQPAFTPSGILTPHALGSRNSPGSQVASNPRQAAYEMRMQNNSSPSISPNT 478
Query: 459 KFEI-SNPEEIDKVKK------------DVVLKYVEGLCWVCRYY--------------- 490
F +P + +K+ D V + G W RYY
Sbjct: 479 SFTSDGSPSPLGGIKRKAEDSDSEPEPEDNVRLWEAG--WKQRYYKNKFDVDAADEKFRR 536
Query: 491 -----YQDVCSWQWFYPYH-------YAPF-----ASDLKDLSDLEITFFLG-EPFRPFD 532
Y + W Y Y Y PF ASD + ++D+ F G +PF+P +
Sbjct: 537 KVVQSYVEGLCWVLRYYYQGCASWKWYYPFHYAPFASDFEGIADMPSDFEKGTKPFKPLE 596
Query: 533 QLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEK 592
QLMG PAAS + LP +R LM+DP S I FYP DF ID+NGK++AWQGV LPF+DE+
Sbjct: 597 QLMGVFPAASGNFLPPSWRKLMSDPDSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDER 656
Query: 593 LLLRQTKKLEVFLTEEELFRNSVMLDLLYVHPQHPLYQQITLYCQLYHQLPPQDRFAWEI 652
L +++ LT EE RNS+ D+L+V HPL+ I Q P E+
Sbjct: 657 RLRAALEEVYPDLTPEETRRNSLGGDVLFVGKHHPLHDFILELYQTGSTEP------VEV 710
Query: 653 DVNASGGMNGYIWLCERNGL-RSIIPSPVKGLPDIERNQAM 692
G+ G L E L I+ SPV L D+ +N +
Sbjct: 711 PPELCHGIQGKFSLDEEAILPDQIVCSPVPMLRDLTQNTVV 751
>gi|402883351|ref|XP_003905183.1| PREDICTED: 5'-3' exoribonuclease 2 isoform 1 [Papio anubis]
gi|355784737|gb|EHH65588.1| 5'-3' exoribonuclease 2 [Macaca fascicularis]
gi|380810654|gb|AFE77202.1| 5'-3' exoribonuclease 2 [Macaca mulatta]
gi|383416591|gb|AFH31509.1| 5'-3' exoribonuclease 2 [Macaca mulatta]
gi|384945858|gb|AFI36534.1| 5'-3' exoribonuclease 2 [Macaca mulatta]
Length = 950
Score = 551 bits (1421), Expect = e-154, Method: Compositional matrix adjust.
Identities = 326/763 (42%), Positives = 435/763 (57%), Gaps = 83/763 (10%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPAF+RWL+ +YP IV+ VEE P+ + GV PVD SKPNPN +EFDNLYLDMNGII
Sbjct: 1 MGVPAFFRWLSRKYPSIIVNCVEEKPK-ECNGVKIPVDASKPNPNDVEFDNLYLDMNGII 59
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ KPAP + D++ +IF+YID +F +VRPR+LLY+AIDGVAPRAKMNQQR+RRF
Sbjct: 60 HPCTHPEDKPAPKNEDEMMVAIFEYIDRLFSIVRPRRLLYMAIDGVAPRAKMNQQRSRRF 119
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQ 180
RA+K+ EA E++R+R+E G L +E E DSN ITPGT+FM L+ L+Y+I
Sbjct: 120 RASKEGMEAAVEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIA 179
Query: 181 ARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
RLN PGW+ VILSDA+ PGEGEHKIM YIR QR P DPNT HCL G DADLIML
Sbjct: 180 DRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIML 239
Query: 241 SLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDT-PIHK 299
LATHE +F+I+RE P + + C +C Q GH +C G P + + + D+ P +
Sbjct: 240 GLATHEPNFTIIREEFK-PNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADSLPCAE 298
Query: 300 KKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREG 359
++ FL + VLREYL+ EL + + PF + ER +DD+VF+CFFVGNDFLPH+P+LEIRE
Sbjct: 299 GEFIFLRLNVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREN 358
Query: 360 AINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYEYNE 419
AI+ L+++Y+ GGYLT++G V L RV+ + +V ED IF+KR + ++ +
Sbjct: 359 AIDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSFRRRQ 418
Query: 420 AM---------------------KLNARRESSEELLQAPVAVADTVKLGEPGYKERYYAD 458
L +R ++ P A +++
Sbjct: 419 KEKRKRMKRDQPAFTPSGILTPHALGSRNSPGSQVASNPRQAAYEMRMQNNSSPSISPNT 478
Query: 459 KFEI-SNPEEIDKVKK------------DVVLKYVEGLCWVCRYY--------------- 490
F +P I +K+ D V + G W RYY
Sbjct: 479 SFTSDGSPSPIGGIKRKAEDSDSEPEPEDNVRLWEAG--WKQRYYKNKFDVDAADEKFRR 536
Query: 491 -----YQDVCSWQWFYPYH-------YAPF-----ASDLKDLSDLEITFFLG-EPFRPFD 532
Y + W Y Y Y PF ASD + ++D+ F G +PF+P +
Sbjct: 537 KVVQSYVEGLCWVLRYYYQGCASWKWYYPFHYAPFASDFEGIADMPSDFEKGTKPFKPLE 596
Query: 533 QLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEK 592
QLMG PAAS + LP +R LM+DP S I FYP DF ID+NGK++AWQGV LPF+DE+
Sbjct: 597 QLMGVFPAASGNFLPPSWRKLMSDPDSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDER 656
Query: 593 LLLRQTKKLEVFLTEEELFRNSVMLDLLYVHPQHPLYQQITLYCQLYHQLPPQDRFAWEI 652
L +++ LT EE RNS+ D+L+V HPL+ I Q P +
Sbjct: 657 RLRAALEEVYPDLTPEETRRNSLGGDVLFVGKHHPLHDFILELYQTGSTEP--------V 708
Query: 653 DV--NASGGMNGYIWLCERNGL-RSIIPSPVKGLPDIERNQAM 692
DV G+ G L E L I+ SPV L D+ +N +
Sbjct: 709 DVPPELCHGIQGKFSLDEEAILPDQIVCSPVPMLRDLTQNTVV 751
>gi|193786052|dbj|BAG50941.1| unnamed protein product [Homo sapiens]
Length = 950
Score = 551 bits (1421), Expect = e-154, Method: Compositional matrix adjust.
Identities = 324/761 (42%), Positives = 434/761 (57%), Gaps = 79/761 (10%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPAF+RWL+ +YP IV+ VEE P+ + GV PVD SKPNPN +EFDNLYLDMNGII
Sbjct: 1 MGVPAFFRWLSRKYPSIIVNCVEEKPK-ECNGVKIPVDASKPNPNDVEFDNLYLDMNGII 59
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ KPAP + D++ +IF+YID +F +VRPR+LLY+AIDGVAPRAKMNQQR+RRF
Sbjct: 60 HPCTHPEDKPAPKNEDEMMVAIFEYIDRLFSIVRPRRLLYMAIDGVAPRAKMNQQRSRRF 119
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQ 180
RA+K+ EA E++R+R+E G L +E E DSN ITPGT+FM L+ L+Y+I
Sbjct: 120 RASKEGMEAAVEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIA 179
Query: 181 ARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
RLN PGW+ VILSDA+ PGEGEHKIM YIR QR P DPNT HCL G DADLIML
Sbjct: 180 DRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIML 239
Query: 241 SLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDT-PIHK 299
LATHE +F+I+RE P + + C +C Q GH +C G P + + + D+ P +
Sbjct: 240 GLATHEPNFTIIREEFK-PNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADSLPCAE 298
Query: 300 KKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREG 359
++ FL + VLREYL+ EL + + PF + ER +DD+VF+CFFVGNDFLPH+P+LEIRE
Sbjct: 299 GEFIFLRLNVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREN 358
Query: 360 AINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYEYNE 419
AI+ L+++Y+ GGYLT++G V L RV+ + +V ED IF+KR + ++ +
Sbjct: 359 AIDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSFRRRQ 418
Query: 420 AM---------------------KLNARRESSEELLQAPVAVADTVKLGEPGYKERYYAD 458
L +R ++ P A +++
Sbjct: 419 KEKRKRMKRDQPAFTPSGILTPHALGSRNSPGSQVASNPRQAAYEMRMQNNSSPSISPNT 478
Query: 459 KFEI-SNPEEIDKVKK------------DVVLKYVEGLCWVCRYY--------------- 490
F +P + +K+ D V + G W RYY
Sbjct: 479 SFTSDGSPSPLGGIKRKAEDSDSEPEPEDNVRLWEAG--WKQRYYKNKFDVDAADEKFRR 536
Query: 491 -----YQDVCSWQWFYPYH-------YAPF-----ASDLKDLSDLEITFFLG-EPFRPFD 532
Y + W Y Y Y PF ASD + ++D+ F G +PF+P +
Sbjct: 537 KVVQSYVEGLCWVLRYYYQGCASWKWYYPFHYAPFASDFEGIADMPSDFEKGTKPFKPLE 596
Query: 533 QLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEK 592
QLMG PAAS + LP +R LM+DP S I FYP DF ID+NGK++AWQGV LPF+DE+
Sbjct: 597 QLMGVFPAASGNFLPPSWRKLMSDPDSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDER 656
Query: 593 LLLRQTKKLEVFLTEEELFRNSVMLDLLYVHPQHPLYQQITLYCQLYHQLPPQDRFAWEI 652
L +++ LT EE RNS+ D+L+V HPL+ I Q P E+
Sbjct: 657 RLRAALEEVYPDLTPEETRRNSLGGDVLFVGKHHPLHDFILELYQTGSTEP------VEV 710
Query: 653 DVNASGGMNGYIWLCERNGL-RSIIPSPVKGLPDIERNQAM 692
G+ G L E L I+ SPV L D+ +N +
Sbjct: 711 PPELCHGIQGKFSLDEEAILPDQIVCSPVPMLRDLTQNTVV 751
>gi|332238204|ref|XP_003268293.1| PREDICTED: 5'-3' exoribonuclease 2 isoform 1 [Nomascus leucogenys]
Length = 950
Score = 551 bits (1421), Expect = e-154, Method: Compositional matrix adjust.
Identities = 326/763 (42%), Positives = 435/763 (57%), Gaps = 83/763 (10%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPAF+RWL+ +YP IV+ VEE P+ + GV PVD SKPNPN +EFDNLYLDMNGII
Sbjct: 1 MGVPAFFRWLSRKYPSIIVNCVEEKPK-ECNGVKIPVDASKPNPNDVEFDNLYLDMNGII 59
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ KPAP + D++ +IF+YID +F +VRPR+LLY+AIDGVAPRAKMNQQR+RRF
Sbjct: 60 HPCTHPEDKPAPKNEDEMMVAIFEYIDRLFSIVRPRRLLYMAIDGVAPRAKMNQQRSRRF 119
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQ 180
RA+K+ EA E++R+R+E G L +E E DSN ITPGT+FM L+ L+Y+I
Sbjct: 120 RASKEGMEAAVEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIA 179
Query: 181 ARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
RLN PGW+ VILSDA+ PGEGEHKIM YIR QR P DPNT HCL G DADLIML
Sbjct: 180 DRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIML 239
Query: 241 SLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDT-PIHK 299
LATHE +F+I+RE P + + C +C Q GH +C G P + + + D+ P +
Sbjct: 240 GLATHEPNFTIIREEFK-PNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADSLPCAE 298
Query: 300 KKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREG 359
++ FL + VLREYL+ EL + + PF + ER +DD+VF+CFFVGNDFLPH+P+LEIRE
Sbjct: 299 GEFIFLRLNVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREN 358
Query: 360 AINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYEYNE 419
AI+ L+++Y+ GGYLT++G V L RV+ + +V ED IF+KR + ++ +
Sbjct: 359 AIDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSFRRRQ 418
Query: 420 AM---------------------KLNARRESSEELLQAPVAVADTVKLGEPGYKERYYAD 458
L +R ++ P A +++
Sbjct: 419 KEKRKRMKRDQPAFTPSGILTPHALGSRNSPGSQVASNPRQAAYEMRMQNNSSPSISPNT 478
Query: 459 KFEI-SNPEEIDKVKK------------DVVLKYVEGLCWVCRYY--------------- 490
F +P I +K+ D V + G W RYY
Sbjct: 479 SFTSDGSPSPIGGIKRKAEDSDSEPEPEDNVRLWEAG--WKQRYYKNKFDVDAADEKFRR 536
Query: 491 -----YQDVCSWQWFYPYH-------YAPF-----ASDLKDLSDLEITFFLG-EPFRPFD 532
Y + W Y Y Y PF ASD + ++D+ F G +PF+P +
Sbjct: 537 KVVQSYVEGLCWVLRYYYQGCASWKWYYPFHYAPFASDFEGIADMPSDFEKGTKPFKPLE 596
Query: 533 QLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEK 592
QLMG PAAS + LP +R LM+DP S I FYP DF ID+NGK++AWQGV LPF+DE+
Sbjct: 597 QLMGVFPAASGNFLPPSWRKLMSDPDSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDER 656
Query: 593 LLLRQTKKLEVFLTEEELFRNSVMLDLLYVHPQHPLYQQITLYCQLYHQLPPQDRFAWEI 652
L +++ LT EE RNS+ D+L+V HPL+ I Q P +
Sbjct: 657 RLRAALEEVYPDLTPEETRRNSLGGDVLFVGKHHPLHDFILELYQTGSTEP--------V 708
Query: 653 DV--NASGGMNGYIWLCERNGL-RSIIPSPVKGLPDIERNQAM 692
DV G+ G L E L I+ SPV L D+ +N +
Sbjct: 709 DVPPELCHGIQGRFSLDEEAILPDQIVCSPVPMLRDLTQNTVV 751
>gi|114681219|ref|XP_514546.2| PREDICTED: 5'-3' exoribonuclease 2 isoform 7 [Pan troglodytes]
gi|397478693|ref|XP_003810674.1| PREDICTED: 5'-3' exoribonuclease 2 isoform 1 [Pan paniscus]
gi|410223814|gb|JAA09126.1| 5'-3' exoribonuclease 2 [Pan troglodytes]
gi|410252370|gb|JAA14152.1| 5'-3' exoribonuclease 2 [Pan troglodytes]
gi|410308366|gb|JAA32783.1| 5'-3' exoribonuclease 2 [Pan troglodytes]
gi|410334533|gb|JAA36213.1| 5'-3' exoribonuclease 2 [Pan troglodytes]
Length = 950
Score = 551 bits (1419), Expect = e-154, Method: Compositional matrix adjust.
Identities = 325/763 (42%), Positives = 435/763 (57%), Gaps = 83/763 (10%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPAF+RWL+ +YP IV+ VEE P+ + GV PVD SKPNPN +EFDNLYLDMNGII
Sbjct: 1 MGVPAFFRWLSRKYPSIIVNCVEEKPK-ECNGVKIPVDASKPNPNDVEFDNLYLDMNGII 59
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ KPAP + D++ +IF+YID +F +VRPR+LLY+AIDGVAPRAKMNQQR+RRF
Sbjct: 60 HPCTHPEDKPAPKNEDEMMVAIFEYIDRLFSIVRPRRLLYMAIDGVAPRAKMNQQRSRRF 119
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQ 180
RA+K+ EA E++R+R+E G L +E E DSN ITPGT+FM L+ L+Y+I
Sbjct: 120 RASKEGMEAAVEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIA 179
Query: 181 ARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
RLN PGW+ VILSDA+ PGEGEHKIM YIR QR P DPNT HCL G DADLIML
Sbjct: 180 DRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIML 239
Query: 241 SLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDT-PIHK 299
LATHE +F+I+RE P + + C +C Q GH +C G P + + + D+ P +
Sbjct: 240 GLATHEPNFTIIREEFK-PNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADSLPCAE 298
Query: 300 KKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREG 359
++ FL + VLREYL+ EL + + PF + ER +DD+VF+CFFVGNDFLPH+P+LEIRE
Sbjct: 299 GEFIFLRLNVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREN 358
Query: 360 AINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYEYNE 419
AI+ L+++Y+ GGYLT++G V L RV+ + +V ED IF+KR + ++ +
Sbjct: 359 AIDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSFRRRQ 418
Query: 420 AM---------------------KLNARRESSEELLQAPVAVADTVKLGEPGYKERYYAD 458
L +R ++ P A +++
Sbjct: 419 KEKRKRMKRDQPAFTPSGILTPHALGSRNSPGSQVASNPRQAAYEMRMQNNSSPSISPNT 478
Query: 459 KFEI-SNPEEIDKVKK------------DVVLKYVEGLCWVCRYY--------------- 490
F +P + +K+ D V + G W RYY
Sbjct: 479 SFTSDGSPSPLGGIKRKAEDSDSEPEPEDNVRLWEAG--WKQRYYKNKFDVDAADEKFRR 536
Query: 491 -----YQDVCSWQWFYPYH-------YAPF-----ASDLKDLSDLEITFFLG-EPFRPFD 532
Y + W Y Y Y PF ASD + ++D+ F G +PF+P +
Sbjct: 537 KVVQSYVEGLCWVLRYYYQGCASWKWYYPFHYAPFASDFEGIADMPSDFEKGTKPFKPLE 596
Query: 533 QLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEK 592
QLMG PAAS + LP +R LM+DP S I FYP DF ID+NGK++AWQGV LPF+DE+
Sbjct: 597 QLMGVFPAASGNFLPPSWRKLMSDPDSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDER 656
Query: 593 LLLRQTKKLEVFLTEEELFRNSVMLDLLYVHPQHPLYQQITLYCQLYHQLPPQDRFAWEI 652
L +++ LT EE RNS+ D+L+V HPL+ I Q P +
Sbjct: 657 RLRAALEEVYPDLTPEETRRNSLGGDVLFVGKHHPLHDFILELYQTGSTEP--------V 708
Query: 653 DV--NASGGMNGYIWLCERNGL-RSIIPSPVKGLPDIERNQAM 692
DV G+ G L E L I+ SPV L D+ +N +
Sbjct: 709 DVPPELCHGIQGKFSLDEEAILPDQIVCSPVPMLRDLTQNTVV 751
>gi|449528758|ref|XP_004171370.1| PREDICTED: 5'-3' exoribonuclease 3-like [Cucumis sativus]
Length = 373
Score = 550 bits (1417), Expect = e-154, Method: Compositional matrix adjust.
Identities = 263/368 (71%), Positives = 313/368 (85%), Gaps = 1/368 (0%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPAFYRWLA++YPL +VDV+EE+P V +G+A PVD SKPNPN +EFDNLYLDMNGII
Sbjct: 1 MGVPAFYRWLAEKYPLVVVDVIEEEPVVI-DGIAIPVDTSKPNPNKLEFDNLYLDMNGII 59
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPCFHP+ +P+PT++ +VF+ +FDYID +F++VRPRKLLY+AIDGVAPRAKMNQQR+RRF
Sbjct: 60 HPCFHPEDRPSPTTFSEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQ 180
RAAKDA +A AEE RLR+EFE+ G+ L KE+ + DSNVITPGT FMAVLS ALQY++
Sbjct: 120 RAAKDAIDAAAEETRLREEFEKEGRKLPPKEESQVFDSNVITPGTDFMAVLSIALQYYVH 179
Query: 181 ARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
RLN PGW+ KVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML
Sbjct: 180 IRLNNDPGWKNIKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 239
Query: 241 SLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIHKK 300
+LATHE+HFSILRE++ PGQQEKCF+CGQ+GH AA+C GK +++ + KK
Sbjct: 240 ALATHEVHFSILREIVFTPGQQEKCFLCGQMGHFAADCEGKAKRKSGEFDEKVEEVTIKK 299
Query: 301 KYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGA 360
YQFL+IW LREYL+YE+ IPNPPF I+ ERIVDDFVF+CFFVGNDFLPHMPTLEIRE
Sbjct: 300 PYQFLHIWTLREYLEYEMRIPNPPFAIDIERIVDDFVFMCFFVGNDFLPHMPTLEIREVN 359
Query: 361 INLLMHVY 368
+ L++ +Y
Sbjct: 360 LMLVLTIY 367
>gi|224065931|ref|XP_002301985.1| predicted protein [Populus trichocarpa]
gi|222843711|gb|EEE81258.1| predicted protein [Populus trichocarpa]
Length = 851
Score = 549 bits (1415), Expect = e-153, Method: Compositional matrix adjust.
Identities = 292/447 (65%), Positives = 350/447 (78%), Gaps = 18/447 (4%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPAFYRWLA++YPL +VDV+EE+P V EGV PVD S+PNPN +E+DNLYLDMNGI+
Sbjct: 1 MGVPAFYRWLAEKYPLVVVDVIEEEPVVI-EGVKIPVDTSRPNPNNIEYDNLYLDMNGIV 59
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAI-DGVAPRAKMNQQRTRR 119
HPCFHP+ +P+PTS+D+VF+ +FDYID +F++VRPRKLLY+AI + +MNQQR+RR
Sbjct: 60 HPCFHPEDRPSPTSFDEVFQCMFDYIDRLFVVVRPRKLLYMAIGEWSCTSYEMNQQRSRR 119
Query: 120 FRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFI 179
FRAAKDAA+A AEEERLR+EFE G+ L KE +T DSNVITPGT+FMAVL
Sbjct: 120 FRAAKDAADAAAEEERLREEFEREGRKLPPKESSQTFDSNVITPGTEFMAVL-------- 171
Query: 180 QARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIM 239
LN PGW+ K ILSDANVPGEGEHKIMSYIRLQ NLPG++PNTRHCLYGLDADLIM
Sbjct: 172 ---LNYDPGWKKIKAILSDANVPGEGEHKIMSYIRLQSNLPGYNPNTRHCLYGLDADLIM 228
Query: 240 LSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWN-GVDDTPIH 298
LSLATHE+ FSILRE++ PGQQ+KCF+CGQ+GHLAA+C GK +++ +D +
Sbjct: 229 LSLATHEVLFSILREIVFTPGQQDKCFLCGQMGHLAADCEGKAKRKAGEFDEKGNDVAVP 288
Query: 299 KKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIRE 358
KK YQFLNIW+LREYL+YE IPNPPF I+ ERIVDDF+F+CFFVGNDFLPHMPTLEIRE
Sbjct: 289 KKPYQFLNIWILREYLEYEFRIPNPPFEIDLERIVDDFIFICFFVGNDFLPHMPTLEIRE 348
Query: 359 GAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRI-QQAYEY 417
GAINLLM VY++EF + GYLTD + L+RVE FIQ+V YED+IFQKR R+ Q+ E
Sbjct: 349 GAINLLMAVYKKEFRVLDGYLTDGSKPNLNRVEHFIQAVGSYEDKIFQKRARLHQRQAER 408
Query: 418 NEAMKLNARRESSEELLQAP---VAVA 441
+ K ARR E P VAVA
Sbjct: 409 IKREKAQARRGDDAEPQNQPESLVAVA 435
Score = 278 bits (712), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 147/286 (51%), Positives = 187/286 (65%), Gaps = 7/286 (2%)
Query: 413 QAYEYNEAMKLNAR---RESSEELLQAPVAVADTVKLGEPGYKERYYADKFEISNPEEID 469
+ +E E +K + RE S+ + + D VKLGEPG+KERYY KF EE++
Sbjct: 496 EVHENQEELKTKLKELLREKSD-VFNSKNHGEDKVKLGEPGWKERYYEQKFSAKTLEEME 554
Query: 470 KVKKDV-VLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDLEITFFLGEPF 528
+++DV VL+Y EGLCWV YYY+ VCSWQWFYPYHYAPFASDLKDL L+I+F LG PF
Sbjct: 555 DIRRDVKVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLGQLDISFELGSPF 614
Query: 529 RPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPF 588
+PF+QL+G PAASS ALP YR LMTDPSSP FYP DF++DMNGKR+AWQG+ KLP
Sbjct: 615 KPFNQLLGVFPAASSHALPVHYRKLMTDPSSPFIDFYPTDFEVDMNGKRYAWQGIAKLPL 674
Query: 589 IDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVHPQHPLYQQITLYCQLYHQLPPQDRF 648
IDE LL + +K+E LTEEE RNS+M D+ +V H L + I L QL ++R
Sbjct: 675 IDESRLLAEVQKIEHTLTEEEARRNSMMFDMHFVSSSHSLSESINLLDNHCKQLTDKERA 734
Query: 649 AWEIDVNA--SGGMNGYIWLCERNGLRSIIPSPVKGLPDIERNQAM 692
+ +N S GMNGY+ C + I SPV + DI N+ +
Sbjct: 735 EVKERINPELSDGMNGYLSPCAGDTHPPIFRSPVVSMEDILANEVI 780
>gi|297795249|ref|XP_002865509.1| hypothetical protein ARALYDRAFT_917497 [Arabidopsis lyrata subsp.
lyrata]
gi|297311344|gb|EFH41768.1| hypothetical protein ARALYDRAFT_917497 [Arabidopsis lyrata subsp.
lyrata]
Length = 1053
Score = 548 bits (1413), Expect = e-153, Method: Compositional matrix adjust.
Identities = 274/416 (65%), Positives = 335/416 (80%), Gaps = 5/416 (1%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP+FYRWL RYPL I +V+EE+P GV P+D SKPNPNG E+DNLYLDMNGII
Sbjct: 1 MGVPSFYRWLIQRYPLIIQEVIEEEPLEVNGGVTIPIDTSKPNPNGYEYDNLYLDMNGII 60
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPCFHP+ KP+PT++ +VF+ +FDYID +F++VRPRKLL++AIDGVAPRAKMNQQR RRF
Sbjct: 61 HPCFHPEDKPSPTTFTEVFQCMFDYIDRLFVMVRPRKLLFMAIDGVAPRAKMNQQRARRF 120
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQ 180
RAAKDAAEA AEEE+LR+EFE GK L K + DSNVITPGT+FMA LS AL+Y+I
Sbjct: 121 RAAKDAAEAAAEEEQLREEFEREGKKLPPKVDSQVFDSNVITPGTEFMATLSFALRYYIH 180
Query: 181 ARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
RLN PGW+ KVILSDANVPGEGEHKIMSYIR +N PG++PNT HCLYGLDADLIML
Sbjct: 181 VRLNSDPGWKNIKVILSDANVPGEGEHKIMSYIRCNKNHPGYNPNTHHCLYGLDADLIML 240
Query: 241 SLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTP---I 297
SLATHEIHFSILREV+ PG+++KCF+CGQVGH AA+C GK + +DDT +
Sbjct: 241 SLATHEIHFSILREVVFFPGEEDKCFLCGQVGHRAADCEGKMKRKAGEM--LDDTEADVV 298
Query: 298 HKKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIR 357
KK Y+F+NIW+LREYL++++ IPN N +R++DDF+F+CFFVGNDFLPHMPTLEIR
Sbjct: 299 VKKPYEFVNIWILREYLEHDMQIPNQRSKKNLDRLIDDFIFICFFVGNDFLPHMPTLEIR 358
Query: 358 EGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQ 413
EGAI LLM VY+ +F + YLTD+ ++ L VE+FI++V YE+QIFQKR ++QQ
Sbjct: 359 EGAIELLMSVYKNKFRSAKKYLTDSSKLNLRNVERFIKAVGTYENQIFQKRAQVQQ 414
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 132/253 (52%), Positives = 171/253 (67%), Gaps = 2/253 (0%)
Query: 442 DTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFY 501
D VKLG G++ERYY +KF + EE++ +++DVVLKY EGLCW+ YYY VCSW WFY
Sbjct: 564 DKVKLGATGWRERYYEEKFTAKSAEEMELIRRDVVLKYTEGLCWIMHYYYHGVCSWNWFY 623
Query: 502 PYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPI 561
PYHYAPFASDLK L L+I F LG PF+PF+QL+ LP+AS+ ALP+ YR LMTDP+SPI
Sbjct: 624 PYHYAPFASDLKGLDSLDIKFELGSPFKPFNQLLAVLPSASAHALPQCYRTLMTDPASPI 683
Query: 562 YKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLY 621
FY DF+IDMNGKR++WQG+ KLPF+DE+ LL +E LT EE+ RNSV+ D+L+
Sbjct: 684 ADFYAADFEIDMNGKRYSWQGISKLPFVDERRLLEAAALVEKSLTNEEIRRNSVLFDMLF 743
Query: 622 VHPQHPLYQQITLYCQLYHQLPPQDRFAW--EIDVNASGGMNGYIWLCERNGLRSIIPSP 679
V HPL + I + L ++R +ID S GMNGYI C + SP
Sbjct: 744 VVASHPLAELIRSLNSRTNNLSNEERATIIEKIDPGLSDGMNGYIASCGGDSQPPCFSSP 803
Query: 680 VKGLPDIERNQAM 692
V+G+ D+ N +
Sbjct: 804 VEGMEDVLANHVI 816
>gi|197100138|ref|NP_001126942.1| 5'-3' exoribonuclease 2 [Pongo abelii]
gi|75040978|sp|Q5R4L5.1|XRN2_PONAB RecName: Full=5'-3' exoribonuclease 2
gi|55733236|emb|CAH93301.1| hypothetical protein [Pongo abelii]
Length = 950
Score = 548 bits (1412), Expect = e-153, Method: Compositional matrix adjust.
Identities = 325/763 (42%), Positives = 434/763 (56%), Gaps = 83/763 (10%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPAF+RWL+ +YP IV+ VEE P+ + GV PVD SKPNPN +EFDNLYLDMNGII
Sbjct: 1 MGVPAFFRWLSRKYPSIIVNCVEEKPK-ECNGVKIPVDASKPNPNDVEFDNLYLDMNGII 59
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ KPAP + D++ +IF+YID +F +VRPR+LLY+AIDGVAPRAKMNQQR+RRF
Sbjct: 60 HPCTHPEDKPAPKNEDEMMVAIFEYIDRLFSIVRPRRLLYMAIDGVAPRAKMNQQRSRRF 119
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQ 180
RA+K+ EA E++R+R+E G L +E E DSN ITPGT+FM L+ L+Y+I
Sbjct: 120 RASKEGMEAAVEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIA 179
Query: 181 ARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
RLN PGW+ VILSDA+ PGEGEHKIM YIR QR P DPNT HCL G DADLIML
Sbjct: 180 DRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIML 239
Query: 241 SLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDT-PIHK 299
LATHE +F+I+RE P + + C +C Q GH +C G + + + D+ P +
Sbjct: 240 GLATHEPNFTIIREEFK-PNKPKPCGLCNQFGHEVKDCEGLLREKKVKHDELADSLPCAE 298
Query: 300 KKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREG 359
++ FL + VLREYL+ EL + + PF + ER +DD+VF+CFFVGNDFLPH+P+LEIRE
Sbjct: 299 GEFIFLRLNVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREN 358
Query: 360 AINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYEYNE 419
AI+ L+++Y+ GGYLT++G V L RV+ + +V ED IF+KR + ++ +
Sbjct: 359 AIDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSFRRRQ 418
Query: 420 AM---------------------KLNARRESSEELLQAPVAVADTVKLGEPGYKERYYAD 458
L +R ++ P A +++
Sbjct: 419 KEKRKRMKRDQPAFTPSGILTPHALGSRNSPGSQVASNPRQAAYEMRMQNNSSPSISPNT 478
Query: 459 KFEI-SNPEEIDKVKK------------DVVLKYVEGLCWVCRYY--------------- 490
F +P I +K+ D V + G W RYY
Sbjct: 479 SFTSDGSPSPIGGIKRKAEDSDSEPEPEDNVRLWEAG--WKQRYYKNKFDADAADEKFRR 536
Query: 491 -----YQDVCSWQWFYPYH-------YAPF-----ASDLKDLSDLEITFFLG-EPFRPFD 532
Y + W Y Y Y PF ASD + ++D+ F G +PF+P +
Sbjct: 537 KVVQSYVEGLCWVLRYYYQGCASWKWYYPFHYAPFASDFEGIADMPSDFEKGTKPFKPLE 596
Query: 533 QLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEK 592
QLMG PAAS + LP +R LM+DP S I FYP DF ID+NGK++AWQGV LPF+DE+
Sbjct: 597 QLMGVFPAASGNFLPPSWRKLMSDPDSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDER 656
Query: 593 LLLRQTKKLEVFLTEEELFRNSVMLDLLYVHPQHPLYQQITLYCQLYHQLPPQDRFAWEI 652
L +++ LT EE RNS+ D+L+V HPL+ I Q P +
Sbjct: 657 RLRAALEEVYPDLTPEETRRNSLGGDVLFVGKHHPLHDFILELYQTGSTEP--------V 708
Query: 653 DV--NASGGMNGYIWLCERNGL-RSIIPSPVKGLPDIERNQAM 692
DV G+ G L E L I+ SPV L D+ +N +
Sbjct: 709 DVPPELCHGIQGKFSLDEEAILPDQIVCSPVPMLRDLTQNTVV 751
>gi|242070071|ref|XP_002450312.1| hypothetical protein SORBIDRAFT_05g003580 [Sorghum bicolor]
gi|241936155|gb|EES09300.1| hypothetical protein SORBIDRAFT_05g003580 [Sorghum bicolor]
Length = 696
Score = 547 bits (1410), Expect = e-153, Method: Compositional matrix adjust.
Identities = 313/697 (44%), Positives = 411/697 (58%), Gaps = 102/697 (14%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPN---------PNGMEFDN 51
MGVP+FY+WL +YP +V E+D + G G S P PNG+ + N
Sbjct: 1 MGVPSFYKWLVGKYPNIVVPAKEDDELLAGAGSTSSSSSSPPGDEQTQAAGGPNGV-YHN 59
Query: 52 LYLDMNGIIHPCFHPDGKP-APTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRA 110
LYLDMNGIIHPCFHP+ + PT++D+VF ++FDYID +F +VRP KLLYLA+DGVAPRA
Sbjct: 60 LYLDMNGIIHPCFHPEDQVYPPTTFDEVFAAMFDYIDRLFRIVRPTKLLYLAVDGVAPRA 119
Query: 111 KMNQQRTRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAV 170
KMNQQR+RRF+AAKDA EAE EE+ LR++F G+ + +E E D NVITPGT+FM
Sbjct: 120 KMNQQRSRRFKAAKDAKEAELEEKLLREKFRAEGREVQPRETNEVSDPNVITPGTEFMEK 179
Query: 171 LSAALQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCL 230
LS AL+Y+I++RLN PGW+ K ILSD+NVPGEGEHKIMS+IR QR+L +DPNTRHCL
Sbjct: 180 LSKALEYYIRSRLNSDPGWKGIKAILSDSNVPGEGEHKIMSFIRGQRSLESYDPNTRHCL 239
Query: 231 YGLDADLIMLSLATHEIHFSILREVITLPGQQEKCFVCG----QVGHLAAECHGKPGDNP 286
YGLDADLIML+LA+HE+HFSILRE + Q E C + + +C G
Sbjct: 240 YGLDADLIMLALASHELHFSILREDVLRSTQPENCIPLSKELFKTEDSSRKCRGWFPRMT 299
Query: 287 ADWNGVDDTPIHKKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGND 346
D +P KK YQFLNIWVLREYL+ +L IPNP + ER++DDF+F+CF GND
Sbjct: 300 ETTASRDRSP--KKPYQFLNIWVLREYLELDLKIPNPVVKTDIERLIDDFIFICFLTGND 357
Query: 347 FLPHMPTLEIREGAINLLMHVYRREFTAMGGYLTD--------AGEVLLDRVEKFIQSVA 398
F+PH+P++EI EGAI+LL+ VY++ F MGGY+ A + + R+EKF ++
Sbjct: 358 FIPHIPSVEIHEGAIDLLLEVYKQAFNKMGGYIVSTEKLKDKHAAYLKVLRLEKFFHELS 417
Query: 399 VYEDQIFQKRTRIQQAYEYNEAMKLNARRESSEE--------LLQAPVAVADTVK-LGEP 449
+ E++IF KR YE E ++ N R ++EE + + P TVK
Sbjct: 418 LCEEKIFVKR------YELRERLQRNLVRRAAEEWKERNYDNMEENPDGPDLTVKSFSTN 471
Query: 450 GYKERYYADKFEIS--------NPEEIDKVKKDVVLKYVEGLC-----------WVCRY- 489
G D+ +++ N ++ + K+D+V G C W R+
Sbjct: 472 GGICTNSQDESDVTANTLELRRNLKDTLRNKQDIV---KSGACKHDAIRLGFAGWKSRFF 528
Query: 490 ----------------------YYQDVCSWQWFYPYHYA--------------PFASDLK 513
Y + +C W Y++A PF SD K
Sbjct: 529 REKFGVEKSNEVGKLKNDMVQKYLEGLC---WVLRYYFADVPSWSWYYPFYYAPFTSDFK 585
Query: 514 DLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDM 573
LS +I+F +P RPFDQLM LP SS ALP+ YR LM + S I KFYP D QID
Sbjct: 586 GLSQFKISFTADKPLRPFDQLMAVLPKESSCALPKCYRELMENEESLIKKFYPSDLQIDT 645
Query: 574 NGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEEL 610
+GKRF WQG+ LPFIDEKLL TK +E L +E+
Sbjct: 646 HGKRFLWQGIAMLPFIDEKLLTSATKTVEDKLAVKEI 682
>gi|296200318|ref|XP_002747535.1| PREDICTED: 5'-3' exoribonuclease 2 isoform 3 [Callithrix jacchus]
Length = 896
Score = 546 bits (1407), Expect = e-152, Method: Compositional matrix adjust.
Identities = 309/708 (43%), Positives = 412/708 (58%), Gaps = 82/708 (11%)
Query: 56 MNGIIHPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQ 115
MNGIIHPC HP+ KPAP + D++ +IF+YID +F +VRPR+LLY+AIDGVAPRAKMNQQ
Sbjct: 1 MNGIIHPCTHPEDKPAPKNEDEMMVAIFEYIDRLFSIVRPRRLLYMAIDGVAPRAKMNQQ 60
Query: 116 RTRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAAL 175
R+RRFRA+K+ EA E++R+R+E G L +E E DSN ITPGT+FM L+ L
Sbjct: 61 RSRRFRASKEGMEAAVEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCL 120
Query: 176 QYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDA 235
+Y+I RLN PGW+ VILSDA+ PGEGEHKIM YIR QR P DPNT HCL G DA
Sbjct: 121 RYYIADRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADA 180
Query: 236 DLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDT 295
DLIML LATHE +F+I+RE P + + C +C Q GH +C G P + + + D+
Sbjct: 181 DLIMLGLATHEPNFTIIREEFK-PNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADS 239
Query: 296 -PIHKKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTL 354
P + ++ FL + VLREYL+ EL + + PF + ER +DD+VF+CFFVGNDFLPH+P+L
Sbjct: 240 LPCAEGEFIFLRLNVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSL 299
Query: 355 EIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQA 414
EIREGAI+ L+++Y+ GGYLT++G V L RV+ + +V ED IF+KR + +
Sbjct: 300 EIREGAIDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDS 359
Query: 415 YEYNEAM---------------------KLNARRESSEELLQAPVAVADTVKL------- 446
+ + L +R S ++ P A +++
Sbjct: 360 FRRRQKEKRKRMKRDQPAFTPTGILTPHALGSRNSPSSQVANNPRQAAYEMRMQNNSSPS 419
Query: 447 ----------GEP---GYKERYYADKFEISNPEEIDKVK--------------------- 472
G P G +R D S PE D V+
Sbjct: 420 VSPNTSFTSDGSPSPIGGIKRKAEDS--DSEPEPEDNVRLWEAGWKQRYYKNKFDVDAAD 477
Query: 473 ----KDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDLEITFFLG-EP 527
+ VV YVEGLCWV RYYYQ SW+W+YP+HYAPFASD + ++D+ F G +P
Sbjct: 478 EKFRRKVVQSYVEGLCWVLRYYYQGCASWKWYYPFHYAPFASDFEGIADMPSDFEKGTKP 537
Query: 528 FRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLP 587
F+P +QLMG PAAS + LP +R LM+DP S I FYP DF ID+NGK++AWQGV LP
Sbjct: 538 FKPLEQLMGVFPAASGNFLPPSWRKLMSDPDSSIIDFYPEDFAIDLNGKKYAWQGVALLP 597
Query: 588 FIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVHPQHPLYQQITLYCQLYHQLPPQDR 647
F+DE+ L +++ LT EE RNS+ D+L+V HPL+ I Q P
Sbjct: 598 FVDERRLRAALEEVYPDLTPEETRRNSLGGDVLFVGKHHPLHDFILELYQTGSTEP---- 653
Query: 648 FAWEIDV--NASGGMNGYIWLCERNGL-RSIIPSPVKGLPDIERNQAM 692
+DV G+ G L E L I+ SPV L D+ +N +
Sbjct: 654 ----VDVPPELCHGIQGKFSLDEEAILPDQIVCSPVPMLRDLTQNTVV 697
>gi|5881961|gb|AAD55138.1|AF064257_1 Dhm1-like protein [Homo sapiens]
Length = 950
Score = 544 bits (1401), Expect = e-152, Method: Compositional matrix adjust.
Identities = 321/761 (42%), Positives = 430/761 (56%), Gaps = 79/761 (10%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPAF+RWL+ +YP IV+ VEE P+ + GV PVD SKPNPN +EFDNLYLDMNGII
Sbjct: 1 MGVPAFFRWLSRKYPSIIVNCVEEKPK-ECNGVKIPVDASKPNPNDVEFDNLYLDMNGII 59
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ KPAP + D++ +IF+YID +F +VRPR+LLY+AIDGVAPR KMNQQR+RRF
Sbjct: 60 HPCTHPEDKPAPKNEDEMMVAIFEYIDRLFSIVRPRRLLYMAIDGVAPRVKMNQQRSRRF 119
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQ 180
RA K EA E++R+R+E G L +E E DSN ITPGT+FM L+ L+Y+I
Sbjct: 120 RAIKRGMEAAVEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIA 179
Query: 181 ARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
RLN PGW+ VILSDA+ PGEGEHKIM YIR QR P DPNT HCL G DADLIML
Sbjct: 180 DRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIML 239
Query: 241 SLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDT-PIHK 299
LATHE +F+I+RE P + + C +C Q GH +C G + + + D+ P +
Sbjct: 240 GLATHEPNFTIIREEFK-PNRPKPCGLCNQFGHEVKDCEGLSREKKGKHDELADSLPCAE 298
Query: 300 KKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREG 359
++ FL + VLREYL+ EL + + PF + ER +DD+VF+CFFVGNDFLPH+P+LEIRE
Sbjct: 299 GEFIFLRLNVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREN 358
Query: 360 AINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYEYNE 419
AI+ L+++Y+ GGYLT++G V L RV+ + +V ED IF+KR + ++ +
Sbjct: 359 AIDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSFRRRQ 418
Query: 420 AM---------------------KLNARRESSEELLQAPVAVADTVKLGEPGYKERYYAD 458
L +R ++ P A +++
Sbjct: 419 KEKRKRMKRDQPAFTPSGILTPHALGSRNSPGSQVASNPRQAAYDMRMQNNSSPSISPNT 478
Query: 459 KFEI-SNPEEIDKVKK------------DVVLKYVEGLCWVCRYY--------------- 490
F +P + +K+ D V + G W RYY
Sbjct: 479 SFTSDGSPSPLGGIKRKAEDSDSEPEPEDNVRLWEAG--WKQRYYKNKFDVDAADEKFRR 536
Query: 491 -----YQDVCSWQWFYPYH-------YAPF-----ASDLKDLSDLEITFFLG-EPFRPFD 532
Y + W Y Y Y PF ASD + ++D+ F G +PF+P +
Sbjct: 537 KVVQSYVEGLCWVLRYYYQGCASWKWYYPFHYAPFASDFEGIADMPSEFEKGTKPFKPLE 596
Query: 533 QLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEK 592
QLMG PAAS + LP +R LM+DP S I FYP DF ID+NGK++AWQGV LPF+DE+
Sbjct: 597 QLMGVFPAASGNFLPPSWRKLMSDPDSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDER 656
Query: 593 LLLRQTKKLEVFLTEEELFRNSVMLDLLYVHPQHPLYQQITLYCQLYHQLPPQDRFAWEI 652
L +++ LT EE RNS+ D+L+V HPL+ I Q P E+
Sbjct: 657 RLRAALEEVYPDLTPEETRRNSLGGDVLFVGKHHPLHDFILELYQTGSTEP------VEV 710
Query: 653 DVNASGGMNGYIWLCERNGL-RSIIPSPVKGLPDIERNQAM 692
G+ G L E L I+ +PV L D+ +N +
Sbjct: 711 PPELCHGIQGKFSLDEEAILPDQIVCAPVPMLRDLTQNTVV 751
>gi|119630592|gb|EAX10187.1| 5'-3' exoribonuclease 2, isoform CRA_b [Homo sapiens]
Length = 979
Score = 536 bits (1382), Expect = e-149, Method: Compositional matrix adjust.
Identities = 324/790 (41%), Positives = 434/790 (54%), Gaps = 108/790 (13%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPAF+RWL+ +YP IV+ VEE P+ + GV PVD SKPNPN +EFDNLYLDMNGII
Sbjct: 1 MGVPAFFRWLSRKYPSIIVNCVEEKPK-ECNGVKIPVDASKPNPNDVEFDNLYLDMNGII 59
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGV-------------- 106
HPC HP+ KPAP + D++ +IF+YID +F +VRPR+LLY+AIDGV
Sbjct: 60 HPCTHPEDKPAPKNEDEMMVAIFEYIDRLFSIVRPRRLLYMAIDGVYCEILGMLATALAF 119
Query: 107 ---------------APRAKMNQQRTRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKE 151
APRAKMNQQR+RRFRA+K+ EA E++R+R+E G L +E
Sbjct: 120 ELLAYCQREGGIDKWAPRAKMNQQRSRRFRASKEGMEAAVEKQRVREEILAKGGFLPPEE 179
Query: 152 KPETCDSNVITPGTQFMAVLSAALQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMS 211
E DSN ITPGT+FM L+ L+Y+I RLN PGW+ VILSDA+ PGEGEHKIM
Sbjct: 180 IKERFDSNCITPGTEFMDNLAKCLRYYIADRLNNDPGWKNLTVILSDASAPGEGEHKIMD 239
Query: 212 YIRLQRNLPGFDPNTRHCLYGLDADLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQV 271
YIR QR P DPNT HCL G DADLIML LATHE +F+I+RE P + + C +C Q
Sbjct: 240 YIRRQRAQPNHDPNTHHCLCGADADLIMLGLATHEPNFTIIREEFK-PNKPKPCGLCNQF 298
Query: 272 GHLAAECHGKPGDNPADWNGVDDT-PIHKKKYQFLNIWVLREYLQYELDIPNPPFPINFE 330
GH +C G P + + + D+ P + ++ FL + VLREYL+ EL + + PF + E
Sbjct: 299 GHEVKDCEGLPREKKGKHDELADSLPCAEGEFIFLRLNVLREYLERELTMASLPFTFDVE 358
Query: 331 RIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRV 390
R +DD+VF+CFFVGNDFLPH+P+LEIRE AI+ L+++Y+ GGYLT++G V L RV
Sbjct: 359 RSIDDWVFMCFFVGNDFLPHLPSLEIRENAIDRLVNIYKNVVHKTGGYLTESGYVNLQRV 418
Query: 391 EKFIQSVAVYEDQIFQKRTRIQQAYEYNEAM---------------------KLNARRES 429
+ + +V ED IF+KR + ++ + L +R
Sbjct: 419 QMIMLAVGEVEDSIFKKRKDDEDSFRRRQKEKRKRMKRDQPAFTPSGILTPHALGSRNSP 478
Query: 430 SEELLQAPVAVADTVKLGEPGYKERYYADKFEI-SNPEEIDKVKK------------DVV 476
++ P A +++ F +P + +K+ D V
Sbjct: 479 GSQVASNPRQAAYEMRMQNNSSPSISPNTSFTSDGSPSPLGGIKRKAEDSDSEPEPEDNV 538
Query: 477 LKYVEGLCWVCRYY--------------------YQDVCSWQWFYPYH-------YAPF- 508
+ G W RYY Y + W Y Y Y PF
Sbjct: 539 RLWEAG--WKQRYYKNKFDVDAADEKFRRKVVQSYVEGLCWVLRYYYQGCASWKWYYPFH 596
Query: 509 ----ASDLKDLSDLEITFFLG-EPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYK 563
ASD + ++D+ F G +PF+P +QLMG PAAS + LP +R LM+DP S I
Sbjct: 597 YAPFASDFEGIADMPSDFEKGTKPFKPLEQLMGVFPAASGNFLPPSWRKLMSDPDSSIID 656
Query: 564 FYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVH 623
FYP DF ID+NGK++AWQGV LPF+DE+ L +++ LT EE RNS+ D+L+V
Sbjct: 657 FYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEETRRNSLGGDVLFVG 716
Query: 624 PQHPLYQQITLYCQLYHQLPPQDRFAWEIDVNASGGMNGYIWLCERNGL-RSIIPSPVKG 682
HPL+ I Q P E+ G+ G L E L I+ SPV
Sbjct: 717 KHHPLHDFILELYQTGSTEP------VEVPPELCHGIQGKFSLDEEAILPDQIVCSPVPM 770
Query: 683 LPDIERNQAM 692
L D+ +N +
Sbjct: 771 LRDLTQNTVV 780
>gi|47214629|emb|CAG01470.1| unnamed protein product [Tetraodon nigroviridis]
Length = 836
Score = 536 bits (1382), Expect = e-149, Method: Compositional matrix adjust.
Identities = 322/776 (41%), Positives = 433/776 (55%), Gaps = 122/776 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPAF+RWL+ +YP IV VEE + + GV PVD ++PNPN +EFDNLYLDMNGII
Sbjct: 1 MGVPAFFRWLSRKYPSIIVHCVEEKGK-ECNGVRIPVDTTRPNPNEVEFDNLYLDMNGII 59
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ KPAP + D++ +IF+YID +F +VRPR++LY+AIDGVAPRAKMNQQR+RRF
Sbjct: 60 HPCTHPEDKPAPKNEDEMMVAIFEYIDRLFNIVRPRRVLYMAIDGVAPRAKMNQQRSRRF 119
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQ 180
RA+K+ AE E++R+R+E GT+FM L+ L+Y+I
Sbjct: 120 RASKEGAELVEEKKRIREE------------------------GTEFMDNLAKCLRYYIA 155
Query: 181 ARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
RLN PGW+ V LSDA+VPGEGEHKIM +IR QR P DPNT HCL G DADLIML
Sbjct: 156 DRLNNDPGWRNITVFLSDASVPGEGEHKIMDFIRRQRAQPNHDPNTHHCLCGADADLIML 215
Query: 241 SLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNG-VDDTPIHK 299
LATHE +F+I+RE P + C +CGQ+GH +C G + + + D P+ +
Sbjct: 216 GLATHEPNFTIIREEFK-PNKPRPCALCGQLGHEIKDCQGTAREKKGEHDEFADSMPVAE 274
Query: 300 KKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREG 359
+++ F+ + VLREYL EL + + PFP +FER VDD+VF+CFFVGNDFLPH+P+LEIREG
Sbjct: 275 QEFIFIRLCVLREYLARELTMASLPFPFDFERSVDDWVFMCFFVGNDFLPHLPSLEIREG 334
Query: 360 AINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQ------- 412
AI+ L+++Y+ GGYLT+ G V L+RVE +Q+V V ED IF+KR +
Sbjct: 335 AIDRLVNIYKDVVHKTGGYLTENGYVKLERVEMIMQAVGVAEDNIFKKRKEDEVRFKRRM 394
Query: 413 -----------------------------------------QAYEYNEAMKLNARRESSE 431
QAYE + + +++
Sbjct: 395 REKKKRMKMEQRGPAYLTTGQFTPHALGGRDQPEAVQNARYQAYEMRKQSMEQHNKNAAQ 454
Query: 432 ELLQAPVAVADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYY- 490
L A ++ G + R K E S+ E +D V + EG W RYY
Sbjct: 455 SLKAAMRNGGNSSTWPSSGPESRGAKRKAEDSDSE---PEPEDNVRLWEEG--WKQRYYK 509
Query: 491 -------------------YQDVCSWQWFYPYH------------YAPFASDLKDLSDLE 519
Y + W Y Y YAPFASD KD+ +
Sbjct: 510 NKFDVDVMDEDFRRKVVQSYVEGLCWVLRYYYQGCASWKWYFPFHYAPFASDFKDIKGMF 569
Query: 520 ITFFLG-EPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRF 578
F G +PF+P +QLMG PAAS + LPE +RNLM+ P S I FYP DF ID+NGK++
Sbjct: 570 SEFEKGTKPFKPLEQLMGVFPAASGNFLPETWRNLMSSPDSSIIDFYPEDFAIDLNGKKY 629
Query: 579 AWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVHPQHPLYQQITLYCQL 638
AWQGV LPF+DE+ L + LT EE RNS+ D +++ H LY I +L
Sbjct: 630 AWQGVALLPFVDERRLRAALADVYPDLTPEEEKRNSLGSDFIFLGKAHLLYDFIQ---EL 686
Query: 639 YHQLPPQDRFAWEIDVNASGGMNGYIWLCERNGL--RSIIPSPVKGLPDIERNQAM 692
Y + EI + G+ G + L + L +++I SP+ L DI +N ++
Sbjct: 687 YRTEATE---GTEIPADLCHGIQGTLNLDDDPILPDKTVI-SPIPTLRDITQNNSV 738
>gi|157138197|ref|XP_001664171.1| 5'-3' exoribonuclease, putative [Aedes aegypti]
gi|108880656|gb|EAT44881.1| AAEL003800-PA [Aedes aegypti]
Length = 958
Score = 536 bits (1380), Expect = e-149, Method: Compositional matrix adjust.
Identities = 325/759 (42%), Positives = 429/759 (56%), Gaps = 78/759 (10%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPAF+RWL+ +YP IV+ VE+ Q D G D+++PNPN +EFDNLYLDMNGII
Sbjct: 1 MGVPAFFRWLSRKYPSVIVECVEQK-QTDEHGNPLYDDMTQPNPNKVEFDNLYLDMNGII 59
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ KPAP D++ +IF+ ID + +VRPRKLLY+AIDGVAPRAKMNQQR+RRF
Sbjct: 60 HPCTHPEDKPAPKDEDEMMVAIFECIDRLMNIVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLL-SAKEKPETCDSNVITPGTQFMAVLSAALQYFI 179
RA+K+AAE AE +++R E G +L KEK DSN ITPGT FM LS LQY++
Sbjct: 120 RASKEAAEKAAEVQKIRDELRAKGCILPPEKEKGAHFDSNCITPGTPFMDRLSKCLQYYV 179
Query: 180 QARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIM 239
R+N PGW+ K+ILSDANVPGEGEHKIM YIR QR P DPNT H L G DADLIM
Sbjct: 180 HDRMNNNPGWKGLKIILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTHHVLCGADADLIM 239
Query: 240 LSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIHK 299
L LATHE HF+I+RE LP ++ C +C +GH +C G + D N P +
Sbjct: 240 LGLATHETHFTIIREEF-LPNKERPCDICQIMGHEMKDCTGLQSER--DINRTPPPPGAE 296
Query: 300 KKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREG 359
+Y F+ + VL+EYL ELD+PN PF +FER++DD+VF+CFFVGNDFLPH+P+LEIRE
Sbjct: 297 TQYIFVRLNVLKEYLAKELDMPNLPFKYDFERVIDDWVFMCFFVGNDFLPHLPSLEIREN 356
Query: 360 AINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAY-EYN 418
AI+ L+ +Y++ GYLTD+G V +DRVE + + ED+IF++R + + E N
Sbjct: 357 AIDRLVTLYKKCVYKTKGYLTDSGSVTVDRVELIMTDLGYAEDEIFRQRKVTEDRFKERN 416
Query: 419 EAMKLNARRESSEELLQ------APVAVADTVK---LGEPGYKERYY------------- 456
+ MKL RE Q AP + + + P + ++
Sbjct: 417 KRMKLQKEREQRPNFEQMNKSQFAPTPLGRGITPQAIQNPRQEAAHFRMFGNSSNQQQSN 476
Query: 457 --------------------ADKFEISNPEEIDKVKKDVVLKYVEGLCWVC--RYYYQDV 494
A E P+E+ + +Y E V ++
Sbjct: 477 SNNDQNRRGQKRKADEPLTPAAVEEAETPDEVRLWEDGFKDRYYESKFDVAPQNMKFRQT 536
Query: 495 CSWQ------WFYPYHYAPFAS--------------DLKDLSDLEITFFLGEPFRPFDQL 534
+W+ W Y+Y AS D K LS++ F G PF+P QL
Sbjct: 537 VAWEYVRGLCWVLKYYYQGCASWEWYFPYHYAPFASDFKGLSNVNTHFDRGTPFKPLQQL 596
Query: 535 MGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLL 594
MG PAAS + +P + LM DP SPI FYP DF ID+NGK+FAWQGV LPF+DEK L
Sbjct: 597 MGVFPAASRNHVPPAFAELMVDPKSPIIDFYPIDFHIDLNGKKFAWQGVALLPFVDEKRL 656
Query: 595 LRQTKKLEVFLTEEELFRNSVMLDLLYVHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDV 654
+ T LT EE RN L LY+ P Y+ L LY+ +R E+ +
Sbjct: 657 FKATDPKVPSLTHEERLRNENGLARLYLSPGPDAYK---LVKGLYNGSVDYER---EVPI 710
Query: 655 NASGGMNGYIWLCERNGLR-SIIPSPVKGLPDIERNQAM 692
M G + + N ++PSP+ GL + N+ +
Sbjct: 711 LVD-CMRGIVIPTKENVTHDGVLPSPIPGLHPVCENKVL 748
>gi|147866227|emb|CAN79939.1| hypothetical protein VITISV_027778 [Vitis vinifera]
Length = 918
Score = 535 bits (1378), Expect = e-149, Method: Compositional matrix adjust.
Identities = 308/744 (41%), Positives = 422/744 (56%), Gaps = 116/744 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP+FYRWL ++YP +V VE++ + S NPNG+EFDNLYLDMNGII
Sbjct: 1 MGVPSFYRWLVNKYPEIVVRAVEDERES-----------SSANPNGIEFDNLYLDMNGII 49
Query: 61 HPCFHPDGKP-APTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRR 119
HPCFHP+ + PT++++VF ++++YID IF +
Sbjct: 50 HPCFHPEDQIFPPTTFEEVFNNMYEYIDRIFSI--------------------------- 82
Query: 120 FRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFI 179
EAEE+RLR+++E K L K++ + D N+ITPGT FM +S ALQ +I
Sbjct: 83 ----------EAEEQRLRRQYEMEXKPLVPKQESQVSDPNIITPGTVFMHEVSKALQQYI 132
Query: 180 QARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIM 239
+R+ GW+ KVILSD+NVPGEGEHKIMS+ RLQR+LP ++PNT HCLYGLDADLIM
Sbjct: 133 CSRMKHEAGWKDLKVILSDSNVPGEGEHKIMSFXRLQRSLPDYNPNTLHCLYGLDADLIM 192
Query: 240 LSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPAD------W---- 289
L+LATHE+HFSILRE + Q+ C A E P + W
Sbjct: 193 LALATHEVHFSILREDVLTLEQRGSC-------ESAVETKTSPPKANSSLVKSRGWFKQV 245
Query: 290 ----------NGVDDTPIHKKKYQFLNIWVLREYLQYELDIPNPP---FPINFERIVDDF 336
++ K YQFL++W+LREYL+ ++ I +PP INFERIVDDF
Sbjct: 246 LTVDKTNSFIKNLESKSSIKMPYQFLHVWILREYLELDMKISDPPEKLKEINFERIVDDF 305
Query: 337 VFLCFFVGNDFLPHMPTLEIREGAINLLMHVYRREFTAMGGYLTD--------------- 381
+FLCFF+GNDFLPHMPTLEI EGAI+LLM VY++EF +GGY+ D
Sbjct: 306 IFLCFFLGNDFLPHMPTLEIHEGAIDLLMTVYKKEFKNIGGYMVDMERNNEEDQSCNLEI 365
Query: 382 ----------AGEVLLDRVEKFIQSVAVYE--DQIFQKRTRIQQAYEYNEAMKLNARRES 429
+G+ R ++++ + + ++ + Y +L +
Sbjct: 366 GSTNRGCTSPSGKA---RSSSSVENLGTSSGTEYLITDKSELXTFYTKEMKKRLKENIRA 422
Query: 430 SEELLQAPVAVADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRY 489
+L ++ D V+LG PG+KERYY +K + I+ +K++V KY EGL WV +Y
Sbjct: 423 KSDLWRSGSLGIDRVRLGHPGWKERYYKEKCSCDTSQGIESTRKELVQKYTEGLLWVLQY 482
Query: 490 YYQDVCSWQWFYPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEK 549
Y+ V SW WFYPYHY PFASD K LS ++ G PF+PFDQLMG LP +S+ ALP+
Sbjct: 483 YFSGVPSWTWFYPYHYGPFASDFKGLSRVKAKXEKGSPFKPFDQLMGVLPPSSAHALPKA 542
Query: 550 YRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEE 609
Y+ LM D S I FY +F++D +GKRF WQG+ KLPFIDE LL +T+KLE L E+E
Sbjct: 543 YQPLMIDEDSNIIDFYNTNFEVDTDGKRFIWQGICKLPFIDEARLLAETRKLEKELEEQE 602
Query: 610 LFRNSVMLDLLYVHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVNASGGMNGYIWLCER 669
RN+ D L++ L + Y + P +ID N S G+NGYI +
Sbjct: 603 AVRNARSFDHLFLRFSDKLR---SFYXEQVSCRKPNK--TAKIDSNFSLGINGYICF-DN 656
Query: 670 NGLRSIIPSPV-KGLPDIERNQAM 692
NGL + + + K L +I+ + +
Sbjct: 657 NGLNMMNSTCLDKNLENIQEDDVI 680
>gi|33337899|gb|AAQ13577.1|AF152169_1 DHP protein [Homo sapiens]
Length = 950
Score = 532 bits (1371), Expect = e-148, Method: Compositional matrix adjust.
Identities = 315/761 (41%), Positives = 427/761 (56%), Gaps = 79/761 (10%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPAF+RWL+ + P IV+ VEE P+ + GV PVD SKPNPN +EFDNLYLDMNGII
Sbjct: 1 MGVPAFFRWLSRKCPSIIVNCVEEKPK-ECNGVKIPVDASKPNPNDVEFDNLYLDMNGII 59
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ KPAP + D++ +IF+YID +F +VRPR+LLY+AIDGVAPR KMNQQR+RRF
Sbjct: 60 HPCTHPEDKPAPKNEDEMMVAIFEYIDRLFSIVRPRRLLYMAIDGVAPRVKMNQQRSRRF 119
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQ 180
RA+K+ EA E++R+R+E G L +E E DSN ITPGT+FM L+ L+Y+I
Sbjct: 120 RASKEGMEAAVEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIA 179
Query: 181 ARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
RLN PGW+ VILSDA+ PGEGEHKIM YIR QR P DPNT HCL G DADLIML
Sbjct: 180 DRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIML 239
Query: 241 SLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDT-PIHK 299
+ +F+I+RE P + + C +C Q GH +C G + + + D+ P +
Sbjct: 240 AFPHMNPNFTIIREEFK-PNRPKPCGLCNQFGHEVKDCEGLSREKKGKHDELADSLPCAE 298
Query: 300 KKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREG 359
++ FL + VLREY++ EL + + PF + ER +DD+VF+CFFVGNDFLPH+P+LEIRE
Sbjct: 299 GEFIFLRLNVLREYVERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREN 358
Query: 360 AINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYEYNE 419
AI+ L+++Y+ GGYLT++G V L RV+ + +V ED IF+KR + ++ +
Sbjct: 359 AIDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSFRRRQ 418
Query: 420 AM---------------------KLNARRESSEELLQAPVAVADTVKLGEPGYKERYYAD 458
L +R ++ P A +++
Sbjct: 419 KEKRKRMKRDQPAFTPSGILTPHALGSRNSPGSQVASNPRQAAYEMRMQNNSSPSISPNT 478
Query: 459 KFEI-SNPEEIDKVKK------------DVVLKYVEGLCWVCRYY--------------- 490
F +P + +K+ D V + G W RYY
Sbjct: 479 SFTSDGSPSPLGGIKRKAEDSDSEPEPEDNVRLWEAG--WKQRYYKNKFDVDAADEKFRR 536
Query: 491 -----YQDVCSWQWFYPYH-------YAPF-----ASDLKDLSDLEITFFLG-EPFRPFD 532
Y + W Y Y Y PF ASD + ++D+ F G +PF+P +
Sbjct: 537 KVVQSYVEGLCWVLRYYYQGCASWKWYYPFHYAPFASDFEGIADMSSEFEKGTKPFKPLE 596
Query: 533 QLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEK 592
QLMG PAAS + LP +R LM+DP S I FYP DF ID+NGK++AWQGV LPF+DE+
Sbjct: 597 QLMGVFPAASGNFLPPSWRKLMSDPDSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDER 656
Query: 593 LLLRQTKKLEVFLTEEELFRNSVMLDLLYVHPQHPLYQQITLYCQLYHQLPPQDRFAWEI 652
L +++ LT EE RNS+ D+L+V HPL+ I Q P E+
Sbjct: 657 RLRAALEEVYPDLTPEETRRNSLGGDVLFVGKHHPLHDFILELYQTGSTEP------VEV 710
Query: 653 DVNASGGMNGYIWLCERNGL-RSIIPSPVKGLPDIERNQAM 692
G+ G L E L I+ SPV L D+ +N +
Sbjct: 711 PPELCHGIQGKFSLDEEAILPDQIVCSPVPMLRDLTQNTVV 751
>gi|390354844|ref|XP_795068.3| PREDICTED: 5'-3' exoribonuclease 2 isoform 2 [Strongylocentrotus
purpuratus]
Length = 999
Score = 530 bits (1364), Expect = e-147, Method: Compositional matrix adjust.
Identities = 307/700 (43%), Positives = 393/700 (56%), Gaps = 73/700 (10%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPAF+RWL+ +YP +V +EE + E V PVD ++PNPN +EFDNLYLDMNGII
Sbjct: 1 MGVPAFFRWLSKKYPSIVVHCLEEKAKEVDE-VRIPVDTTQPNPNDVEFDNLYLDMNGII 59
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ KPAP D++ + IF YID + +VRPR+LLY+AIDGVAPRAKMNQQR+RRF
Sbjct: 60 HPCCHPENKPAPKDEDEMMREIFLYIDRLISIVRPRRLLYMAIDGVAPRAKMNQQRSRRF 119
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLL-SAKEKPETCDSNVITPGTQFMAVLSAALQYFI 179
RA+K++ + + R+R E + G L K K DSN ITPGT+FM L+ L+Y+I
Sbjct: 120 RASKESRDKRQDIARIRAEIADRGGYLPPPKAKESHFDSNCITPGTEFMFRLADCLRYYI 179
Query: 180 QARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIM 239
RLN PGW+ KVILSDAN PGEGEHKIM YIR QR P DPNT HC+ G DADLIM
Sbjct: 180 TERLNSDPGWKDIKVILSDANTPGEGEHKIMDYIRKQRANPDHDPNTHHCMCGADADLIM 239
Query: 240 LSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPI-- 297
L LATHE++F+I+RE P Q+ C +C Q GH EC G P + N +D P+
Sbjct: 240 LGLATHEVNFTIIREEFK-PNQRRACELCNQEGHEMKECQGLPKERA---NELDTIPVPQ 295
Query: 298 -HKKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEI 356
+ ++ FL + +L+EYL+ EL + PF + ER +DD+VF+CFFVGNDFLPH+P+LEI
Sbjct: 296 GAETEFIFLRLNILKEYLEKELWMTGLPFTFDLERAIDDWVFMCFFVGNDFLPHLPSLEI 355
Query: 357 REGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYE 416
REGAI+ L+ +Y++ GYLT+ G V L+RV+ + + ED+IF+KR + +
Sbjct: 356 REGAIDRLIRLYKKAVYKTKGYLTENGVVNLERVQLMMTDLGEAEDEIFKKRRTTELGFR 415
Query: 417 YNEAMKLNARRESSEELLQAPVAVADTVKLGEPGYK-------ERYYADKFEISNPEEID 469
+ +R S+ +A T G P +R A N +
Sbjct: 416 QRNKERNKRQRSSNAPAFVPGGVLAPTPITGGPSSSSAQQILDQRRDARTSSRDNANQSA 475
Query: 470 KVKKDVVLKYVEGL------------------------CWVCRYYYQ--DVCSWQ----- 498
K EG W RYY DV S
Sbjct: 476 ADAMRASFKGGEGRGTKRGHGEEEEDEDKDDTVRLWEDGWKERYYRNKFDVPSSDHDFRA 535
Query: 499 -----------WFYPYHY--------------APFASDLKDLSDLEITFFLG-EPFRPFD 532
W Y+Y APFASD D+ DL F G EPF P +
Sbjct: 536 KVVACYVEGLCWVLRYYYQGCASWKWYFPYHYAPFASDFLDIKDLPNDFEKGTEPFHPLE 595
Query: 533 QLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEK 592
QLM PAAS + LP+ +R M D SPI YP DFQID+NGK++AWQGV LPF+DE
Sbjct: 596 QLMSVFPAASGNFLPDSWREKMVDIDSPIIDLYPDDFQIDLNGKKYAWQGVALLPFVDEH 655
Query: 593 LLLRQTKKLEVFLTEEELFRNSVMLDLLYVHPQHPLYQQI 632
LL + LT E RNS D L+V HPLY I
Sbjct: 656 RLLTTLAGVYDNLTPIEKKRNSNGPDRLFVGKHHPLYNFI 695
>gi|222619617|gb|EEE55749.1| hypothetical protein OsJ_04252 [Oryza sativa Japonica Group]
Length = 1042
Score = 529 bits (1363), Expect = e-147, Method: Compositional matrix adjust.
Identities = 278/413 (67%), Positives = 328/413 (79%), Gaps = 27/413 (6%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPAFYRWLA++YP+ +VDVVEE+ PVD SKPNPNG+EFDNLYLDMNGII
Sbjct: 1 MGVPAFYRWLAEKYPMVVVDVVEEEAVEIEGVKV-PVDTSKPNPNGLEFDNLYLDMNGII 59
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPCFHP+ +P+PT++ +VF+ +FDYID +F++VRPRKL+Y+AIDGVAPRAKMNQQR+RRF
Sbjct: 60 HPCFHPEDRPSPTTFAEVFQCMFDYIDRLFVMVRPRKLMYMAIDGVAPRAKMNQQRSRRF 119
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQ 180
RAAKDAA+A AEEERLR+EFE G+ L K++ +TCDSNVITPGT+FMAVLS ALQY+I
Sbjct: 120 RAAKDAADAAAEEERLREEFEREGRKLPPKQQSQTCDSNVITPGTEFMAVLSIALQYYIH 179
Query: 181 ARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
RLN PGW+ KVILSDANVPGEGEHKIMSYIR QRNLPGF+PNTRHCLYGLDADLIML
Sbjct: 180 LRLNYDPGWKQVKVILSDANVPGEGEHKIMSYIRGQRNLPGFNPNTRHCLYGLDADLIML 239
Query: 241 SLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIHKK 300
+LATHE+HFSILREV+ PGQQ+KCF+CGQVGHLAA C GK +++ + + KK
Sbjct: 240 ALATHEVHFSILREVVYTPGQQDKCFLCGQVGHLAANCEGKVKRKAGEFDEKGEAIVPKK 299
Query: 301 KYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGA 360
YQFLNIW LREYL+YE + NPPFPI+FERIVDDF+F+CFFVGNDFLPHMPTLEIRE
Sbjct: 300 PYQFLNIWTLREYLEYEFRMQNPPFPIDFERIVDDFIFMCFFVGNDFLPHMPTLEIREPD 359
Query: 361 INLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQ 413
+N +VE FIQ+V YED+IFQKR R+ Q
Sbjct: 360 LN--------------------------KVEHFIQAVGSYEDKIFQKRARLHQ 386
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 151/276 (54%), Positives = 191/276 (69%), Gaps = 3/276 (1%)
Query: 419 EAMKLNARRESSEELLQAPVAVADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLK 478
+ M +A RE S+ + + D +KLGEPG++ERYY +KF P +I+++++DVVLK
Sbjct: 486 KTMLKDALREKSD-VFNSENPEEDKIKLGEPGWRERYYEEKFGARTPGQIEEIRRDVVLK 544
Query: 479 YVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTL 538
Y EGLCWV YYY+ VCSWQWFYPYHYAPFASDL L L ITF LG PF+PFDQLMG
Sbjct: 545 YTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLSGLGQLNITFELGSPFKPFDQLMGVF 604
Query: 539 PAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQT 598
PAASS ALP +YR LMTD +SPI FYP DF++DMNGKR++WQG+ KLPFIDE LL +
Sbjct: 605 PAASSHALPVQYRQLMTDANSPIIDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLAEI 664
Query: 599 KKLEVFLTEEELFRNSVMLDLLYVHPQHPLYQQITLYCQLYHQLPPQDR--FAWEIDVNA 656
KK+E LT EE RNS+M ++L+V+ HPL I + LP ++R +ID ++
Sbjct: 665 KKVEHTLTPEEARRNSIMFNMLFVNGSHPLSPYIYSLNSKFGHLPDRERNEIKEKIDPSS 724
Query: 657 SGGMNGYIWLCERNGLRSIIPSPVKGLPDIERNQAM 692
SGGMNGYI LC + + SPV GL DI NQ +
Sbjct: 725 SGGMNGYISLCSGDPCPPVFRSPVDGLEDIMDNQVI 760
>gi|390354842|ref|XP_003728421.1| PREDICTED: 5'-3' exoribonuclease 2 isoform 1 [Strongylocentrotus
purpuratus]
Length = 1010
Score = 529 bits (1363), Expect = e-147, Method: Compositional matrix adjust.
Identities = 307/700 (43%), Positives = 393/700 (56%), Gaps = 73/700 (10%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPAF+RWL+ +YP +V +EE + E V PVD ++PNPN +EFDNLYLDMNGII
Sbjct: 1 MGVPAFFRWLSKKYPSIVVHCLEEKAKEVDE-VRIPVDTTQPNPNDVEFDNLYLDMNGII 59
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ KPAP D++ + IF YID + +VRPR+LLY+AIDGVAPRAKMNQQR+RRF
Sbjct: 60 HPCCHPENKPAPKDEDEMMREIFLYIDRLISIVRPRRLLYMAIDGVAPRAKMNQQRSRRF 119
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLL-SAKEKPETCDSNVITPGTQFMAVLSAALQYFI 179
RA+K++ + + R+R E + G L K K DSN ITPGT+FM L+ L+Y+I
Sbjct: 120 RASKESRDKRQDIARIRAEIADRGGYLPPPKAKESHFDSNCITPGTEFMFRLADCLRYYI 179
Query: 180 QARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIM 239
RLN PGW+ KVILSDAN PGEGEHKIM YIR QR P DPNT HC+ G DADLIM
Sbjct: 180 TERLNSDPGWKDIKVILSDANTPGEGEHKIMDYIRKQRANPDHDPNTHHCMCGADADLIM 239
Query: 240 LSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPI-- 297
L LATHE++F+I+RE P Q+ C +C Q GH EC G P + N +D P+
Sbjct: 240 LGLATHEVNFTIIREEFK-PNQRRACELCNQEGHEMKECQGLPKERA---NELDTIPVPQ 295
Query: 298 -HKKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEI 356
+ ++ FL + +L+EYL+ EL + PF + ER +DD+VF+CFFVGNDFLPH+P+LEI
Sbjct: 296 GAETEFIFLRLNILKEYLEKELWMTGLPFTFDLERAIDDWVFMCFFVGNDFLPHLPSLEI 355
Query: 357 REGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYE 416
REGAI+ L+ +Y++ GYLT+ G V L+RV+ + + ED+IF+KR + +
Sbjct: 356 REGAIDRLIRLYKKAVYKTKGYLTENGVVNLERVQLMMTDLGEAEDEIFKKRRTTELGFR 415
Query: 417 YNEAMKLNARRESSEELLQAPVAVADTVKLGEPGYK-------ERYYADKFEISNPEEID 469
+ +R S+ +A T G P +R A N +
Sbjct: 416 QRNKERNKRQRSSNAPAFVPGGVLAPTPITGGPSSSSAQQILDQRRDARTSSRDNANQSA 475
Query: 470 KVKKDVVLKYVEGL------------------------CWVCRYYYQ--DVCSWQ----- 498
K EG W RYY DV S
Sbjct: 476 ADAMRASFKGGEGRGTKRGHGEEEEDEDKDDTVRLWEDGWKERYYRNKFDVPSSDHDFRA 535
Query: 499 -----------WFYPYHY--------------APFASDLKDLSDLEITFFLG-EPFRPFD 532
W Y+Y APFASD D+ DL F G EPF P +
Sbjct: 536 KVVACYVEGLCWVLRYYYQGCASWKWYFPYHYAPFASDFLDIKDLPNDFEKGTEPFHPLE 595
Query: 533 QLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEK 592
QLM PAAS + LP+ +R M D SPI YP DFQID+NGK++AWQGV LPF+DE
Sbjct: 596 QLMSVFPAASGNFLPDSWREKMVDIDSPIIDLYPDDFQIDLNGKKYAWQGVALLPFVDEH 655
Query: 593 LLLRQTKKLEVFLTEEELFRNSVMLDLLYVHPQHPLYQQI 632
LL + LT E RNS D L+V HPLY I
Sbjct: 656 RLLTTLAGVYDNLTPIEKKRNSNGPDRLFVGKHHPLYNFI 695
>gi|297260411|ref|XP_001094734.2| PREDICTED: 5'-3' exoribonuclease 2 isoform 2 [Macaca mulatta]
Length = 951
Score = 527 bits (1358), Expect = e-147, Method: Compositional matrix adjust.
Identities = 321/766 (41%), Positives = 429/766 (56%), Gaps = 88/766 (11%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPAF+RWL+ +YP IV+ VEE P+ + GV PVD SKPNPN +EFDNLYLDMNGII
Sbjct: 1 MGVPAFFRWLSRKYPSIIVNCVEEKPK-ECNGVKIPVDASKPNPNDVEFDNLYLDMNGII 59
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ KPAP + D++ +IF+YID +F +VRPR+LLY+AIDGVAPRAKMNQQR+RRF
Sbjct: 60 HPCTHPEDKPAPKNEDEMMVAIFEYIDRLFSIVRPRRLLYMAIDGVAPRAKMNQQRSRRF 119
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQ 180
RA+K+ EA E++R+R+E G L +E E DSN ITPGT+FM L+ L+Y+I
Sbjct: 120 RASKEGMEAAVEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIA 179
Query: 181 ARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
RLN PGW+ VILSDA+ PGEGEHKIM YIR QR P DPNT HCL G DADLIML
Sbjct: 180 DRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIML 239
Query: 241 SLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDT-PIHK 299
LATHE +F+I+RE P + + C +C Q GH +C G P + + + D+ P +
Sbjct: 240 GLATHEPNFTIIREEFK-PNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADSLPCAE 298
Query: 300 KKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREG 359
++ FL + VLREYL+ EL + + PF + ER +DD+VF+CFFVGNDFLPH+P+LEIRE
Sbjct: 299 GEFIFLRLNVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREN 358
Query: 360 AINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYEYNE 419
AI+ L+++Y+ GGYLT++G V L RV+ + +V ED IF+KR + ++ +
Sbjct: 359 AIDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSFRRRQ 418
Query: 420 AM---------------------KLNARRESSEELLQAPVAVADTVKLGEPGYKERYYAD 458
L +R ++ P A +++
Sbjct: 419 KEKRKRMKRDQPAFTPSGILTPHALGSRNSPGSQVASNPRQAAYEMRMQNNSSPSISPNT 478
Query: 459 KFEI-SNPEEIDKVKK------------DVVLKYVEGLCWVCRYY--------------- 490
F +P I +K+ D V + G W RYY
Sbjct: 479 SFTSDGSPSPIGGIKRKAEDSDSEPEPEDNVRLWEAG--WKQRYYKNKFDVDAADEKFRR 536
Query: 491 -----YQDVCSWQWFYPYH-------YAPF-----ASDLKDLSDLEITFFLG-EPFRPFD 532
Y + W Y Y Y PF ASD + ++D+ F G +PF+P +
Sbjct: 537 KVVQSYVEGLCWVLRYYYQGCASWKWYYPFHYAPFASDFEGIADMPSDFEKGTKPFKPLE 596
Query: 533 QLMGTLPAASSS---ALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFI 589
QLMG PAAS +L+ D S I FYP DF ID+NGK++AWQGV LPF+
Sbjct: 597 QLMGVFPAASEMCDFCFDSLLFSLIQD--SSIIDFYPEDFAIDLNGKKYAWQGVALLPFV 654
Query: 590 DEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVHPQHPLYQQITLYCQLYHQLPPQDRFA 649
DE+ L +++ LT EE RNS+ D+L+V HPL+ I Q P
Sbjct: 655 DERRLRAALEEVYPDLTPEETRRNSLGGDVLFVGKHHPLHDFILELYQTGSTEP------ 708
Query: 650 WEIDV--NASGGMNGYIWLCERNGL-RSIIPSPVKGLPDIERNQAM 692
+DV G+ G L E L I+ SPV L D+ +N +
Sbjct: 709 --VDVPPELCHGIQGKFSLDEEAILPDQIVCSPVPMLRDLTQNTVV 752
>gi|410954455|ref|XP_003983880.1| PREDICTED: 5'-3' exoribonuclease 2 [Felis catus]
Length = 1093
Score = 526 bits (1356), Expect = e-146, Method: Compositional matrix adjust.
Identities = 312/732 (42%), Positives = 414/732 (56%), Gaps = 82/732 (11%)
Query: 32 GVARPVDVSKPNPNGMEFDNLYLDMNGIIHPCFHPDGKPAPTSYDDVFKSIFDYIDHIFL 91
GV PVD SKPNPN +EFDNLYLDMNGIIHPC HP+ KPAP + D++ +IF+YID +F
Sbjct: 170 GVKIPVDASKPNPNDVEFDNLYLDMNGIIHPCTHPEDKPAPKNEDEMMVAIFEYIDRLFN 229
Query: 92 LVRPRKLLYLAIDGVAPRAKMNQQRTRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKE 151
+VRPR+LLY+AIDGVAPRAKMNQQR+RRFRA+K+ EA E++R+R+E G L +E
Sbjct: 230 IVRPRRLLYMAIDGVAPRAKMNQQRSRRFRASKEGMEAAVEKQRVREEILSKGGFLPPEE 289
Query: 152 KPETCDSNVITPGTQFMAVLSAALQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMS 211
E DSN ITPGT+FM L+ L+Y+I RLN PGW+ VILSDA+ PGEGEHKIM
Sbjct: 290 IKERFDSNCITPGTEFMDNLAKCLRYYIADRLNNDPGWKNLTVILSDASAPGEGEHKIMD 349
Query: 212 YIRLQRNLPGFDPNTRHCLYGLDADLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQV 271
YIR QR P DPNT HCL G DADLIML LATHE +F+I+RE P + + C +C Q
Sbjct: 350 YIRRQRAQPNHDPNTHHCLCGADADLIMLGLATHEPNFTIIREEFK-PNKPKPCGLCNQF 408
Query: 272 GHLAAECHGKPGDNPADWNGVDDT-PIHKKKYQFLNIWVLREYLQYELDIPNPPFPINFE 330
GH +C G P + + + D+ P + ++ FL + VLREYL+ EL + + PF + E
Sbjct: 409 GHEVKDCEGLPREKKGKHDELADSLPCAEGEFIFLRLNVLREYLERELTMASLPFTFDVE 468
Query: 331 RIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRV 390
R +DD+VF+CFFVGNDFLPH+P+LEIREGAI+ L+++Y+ GGYLT++G V L RV
Sbjct: 469 RSIDDWVFMCFFVGNDFLPHLPSLEIREGAIDRLVNIYKNVVHKTGGYLTESGYVNLQRV 528
Query: 391 EKFIQSVAVYEDQIFQKRTRIQQAYEYNEAM---------------------KLNARRES 429
+ + +V ED IF+KR + ++ + L +R
Sbjct: 529 QMIMLAVGEVEDSIFKKRKDDEDSFRRRQKEKRKRMKRDQPAFSPGGILTPHALGSRNSP 588
Query: 430 SEELLQAPVAVADTVKLGEPGYKERYYADKFEI-SNPEEIDKVKK------------DVV 476
++ P A +++ F +P I +K+ D V
Sbjct: 589 GSQVASNPRQAAYEMRMQNNSSPSVSPNTSFTSDGSPSPIGGIKRKAEDSDSEPEPEDNV 648
Query: 477 LKYVEGLCWVCRYY--------------------YQDVCSWQWFYPYH-------YAPF- 508
+ G W RYY Y + W Y Y Y PF
Sbjct: 649 RLWEAG--WKQRYYKNKFDVDAADEKFRRKVVQSYVEGLCWVLRYYYQGCASWKWYYPFH 706
Query: 509 ----ASDLKDLSDLEITFFLG-EPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYK 563
ASD + ++D+ F G +PF+P +QLMG PAAS + LP +R LM+DP S I
Sbjct: 707 YAPFASDFEGIADMPSDFEKGTKPFKPLEQLMGVFPAASGNFLPPSWRKLMSDPDSSIID 766
Query: 564 FYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVH 623
FYP DF ID+NGK++AWQGV LPF+DE+ L +++ LT EE RNS+ D+L+V
Sbjct: 767 FYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEETKRNSLGGDVLFVG 826
Query: 624 PQHPLYQQITLYCQLYHQLPPQDRFAWEIDV--NASGGMNGYIWLCERNGL-RSIIPSPV 680
HPL+ I Q P +DV GM G L E L I+ SPV
Sbjct: 827 KHHPLHDFILELYQTGSTEP--------VDVPPELCHGMQGKFSLDEEAVLPDQIVCSPV 878
Query: 681 KGLPDIERNQAM 692
L D+ +N A+
Sbjct: 879 PMLRDLAQNTAI 890
>gi|430813360|emb|CCJ29283.1| unnamed protein product, partial [Pneumocystis jirovecii]
Length = 741
Score = 522 bits (1345), Expect = e-145, Method: Compositional matrix adjust.
Identities = 294/702 (41%), Positives = 403/702 (57%), Gaps = 78/702 (11%)
Query: 28 VDGEGVARPVDVSKPNPNGMEFDNLYLDMNGIIHPCFHPDGKPAPTSYDDVFKSIFDYID 87
+D +G +S PNPNG EFDNLYLDMNGI+HPC HP+ KPAPT+ D++ IF Y +
Sbjct: 4 IDVDGTLIYPSLSHPNPNGTEFDNLYLDMNGIVHPCTHPEDKPAPTNEDEMMLEIFKYTE 63
Query: 88 HIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRFRAAKDAAEAEAEEERLRKEFEEAGKLL 147
I +VRPRKLL +A+DGVAPRAKMNQQR+RRFRAA+DA + ++ E K + +GK +
Sbjct: 64 RIINMVRPRKLLMIALDGVAPRAKMNQQRSRRFRAAQDAEKKASDLEEFLKLLKASGKSI 123
Query: 148 SAK-EKPETCDSNVITPGTQFMAVLSAALQYFIQARLNQIPGWQFTKVILSDANVPGEGE 206
EK + DSNVITPGT FM L+ +L+Y+I ++N W+ KVI+SDA+VPGEGE
Sbjct: 124 DETLEKKKAWDSNVITPGTPFMDALAKSLRYWIIYKINSDVAWKNLKVIVSDASVPGEGE 183
Query: 207 HKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIMLSLATHEIHFSILREVITLPGQQEK-C 265
HKIM +IR QR PG+DPNT+H +YGLDADLIML LATHE HF +LRE + K C
Sbjct: 184 HKIMEFIRSQRCSPGYDPNTQHVIYGLDADLIMLGLATHEPHFRVLREDVFFQDANSKGC 243
Query: 266 FVCGQVGHLAAECHGKPGDNPADWNGVDDTPIHKKKYQFLNIWVLREYLQYELDIPNPPF 325
+CGQ+GH A EC + EL+IPN F
Sbjct: 244 HICGQIGHFAKEC-----------------------------------TEAELNIPNTSF 268
Query: 326 PINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHVYRREFTAMGGYLTDAGEV 385
+ ER +DD+V LCFFVGNDFLPH+P+L+I EGAI L ++++ + MGGYLT G++
Sbjct: 269 QFDLERAIDDWVCLCFFVGNDFLPHLPSLDIHEGAIETLGNIWKEKLHEMGGYLTMDGKI 328
Query: 386 LLDRVEKFIQSVAVYEDQIFQKRTRIQQAYEYNEAMKLNARRESSEELLQAPVAVADTVK 445
L R E +Q++ ED IF+KR + +Y + + S++E ++
Sbjct: 329 DLKRAEIILQALGQQEDHIFRKRHEKLSSSKYIPYLPNDLIMPSNKEDVKMITITNRNAV 388
Query: 446 LGEPGYKERYYADKFEIS--------NPEEIDKVKKDVVLKYVEGLCWVCRY-------- 489
L K +K I N EE ++ V Y C V
Sbjct: 389 LNRKNLKLANNTNKNAIQLLKEINNDNSEETQEISSIVKKSYNYQNCAVSTKSSILGKRK 448
Query: 490 --YYQDVC---------------SWQWFYPYHYAPFASDLKDLSDLEITFFLGEPFRPFD 532
D+ SW+W+YPYHYAPFASD K++S L I F LG+PF P++
Sbjct: 449 ADTLDDISKQNSAHDNNPDNGCPSWKWYYPYHYAPFASDFKNISSLNIQFELGKPFLPYE 508
Query: 533 QLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEK 592
QLMG LP+AS LP ++LM + S I FYP +F IDMNGK+F+WQGVV LPFIDEK
Sbjct: 509 QLMGVLPSAS---LPRPLQSLMIEEHSEIIDFYPKEFPIDMNGKKFSWQGVVLLPFIDEK 565
Query: 593 LLLRQTKKLEVFLTEEELFRNSVMLDLLYVHPQHPLYQQITLYCQLYHQLPPQDRFAWEI 652
LL+ +K+ L+EEE RN++ D L++ + LY + L L + ++ + ++
Sbjct: 566 RLLKAIEKVYPQLSEEEKSRNTIGNDTLFISEGNALYDNLIL--SLCSKKKDSEK-SIKL 622
Query: 653 DVNASGGMNGYIWLCERNGLRSIIPSPVK--GLPDIERNQAM 692
+ S G++G + E S I SP+ PD+E ++++
Sbjct: 623 NTKLSNGLSGIVLQDENWIPNSTIFSPLTKVSFPDVENDRSL 664
>gi|313232494|emb|CBY24162.1| unnamed protein product [Oikopleura dioica]
Length = 853
Score = 521 bits (1341), Expect = e-145, Method: Compositional matrix adjust.
Identities = 305/713 (42%), Positives = 409/713 (57%), Gaps = 92/713 (12%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPAF+RWL R +V+ VEE PQ + +GV P+D+S NPNG+EFDNLY+DMNG+I
Sbjct: 1 MGVPAFFRWLQRRCGSIVVNCVEE-PQKEIDGVTVPIDLSGANPNGVEFDNLYIDMNGVI 59
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ +PAP + +++F+ IFD +D + +VRPRKLLYLAIDG APRAKMNQQR+RRF
Sbjct: 60 HPCSHPEDRPAPRNEEEIFECIFDALDRMMNIVRPRKLLYLAIDGPAPRAKMNQQRSRRF 119
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKE-KPETCDSNVITPGTQFMAVLSAALQYFI 179
RAAK++ + + E E AG L + K E DSN ITPGT+FM L+ AL+++I
Sbjct: 120 RAAKESVQLSELMAEKKLEIERAGGRLPPPDPKKEKFDSNCITPGTEFMDRLAKALRFYI 179
Query: 180 QARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIM 239
RLN+ GWQ VILSDA+VPGEGEHKI+ YIR QRN P DPNT HC++G DADLIM
Sbjct: 180 SERLNKEAGWQELNVILSDASVPGEGEHKIIDYIRKQRNTPTHDPNTHHCIWGADADLIM 239
Query: 240 LSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDT--PI 297
L LATHE +F+I+RE G+ + C +CGQ GH +C G P GV+D P+
Sbjct: 240 LGLATHEPNFTIVREEFVY-GKPKPCVLCGQCGHELIDCLGLP-------EGVEDKEPPV 291
Query: 298 HKK-KYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEI 356
K Y F+ I +RE++ EL IPN P + E I+DD++ LCFFVGNDFLPH+P+L I
Sbjct: 292 FSKGNYIFIRIATVREWIAQELQIPNIPITWDLENIIDDWILLCFFVGNDFLPHLPSLSI 351
Query: 357 REGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQ-QAY 415
REGAI+ L+ +Y+R M Y+T G V L VE ++S+ ED IF+KR + + Q
Sbjct: 352 REGAIDKLVGIYKRTVCEMKSYMTKDGTVNLKAVEFVMRSIGRMEDAIFKKRRQEECQRR 411
Query: 416 EYNEAMKLNAR--RESSEELLQAPVAVADTV----------------------KLGEPGY 451
+E K R R + ++ Q PVA + + ++ +
Sbjct: 412 VRDERRKHQDRNKRLNRNQVHQTPVAKSGVMEPKMVNQHQRKAKAHDLNKTARQIRQEAA 471
Query: 452 KERYYADKFEISNPEEID-----KVK--------------KDVVLKYVEGLCWVCRYY-- 490
+ R A K E + E+I K + +D V + +G W RY+
Sbjct: 472 EARLTAAKLEDQDTEQITLSALAKARAMQARQNDNSALDAEDEVRLFEDG--WKDRYFRT 529
Query: 491 ------------------YQDVCSWQWFY------------PYHYAPFASDLKDLSDLEI 520
Y + W + Y PYHYAPFASD L +EI
Sbjct: 530 KFDVSADDNDFKRAVVGAYTEGLCWVFAYYFQGCLDWGWYYPYHYAPFASDFVHLDSVEI 589
Query: 521 TFFL-GEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFA 579
+ +P +P +QLM PA S LP +R LM+DP S I YP DF +D+NGK+F
Sbjct: 590 NWQRDAKPRKPLEQLMCVFPAGSGEFLPPSWRKLMSDPDSQIIDMYPTDFVVDLNGKKFE 649
Query: 580 WQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVHPQHPLYQQI 632
W GV LPF+DE L R K+ LTE+E RN V D L+V ++ +Y ++
Sbjct: 650 WMGVALLPFLDEARLHRTLAKVYGDLTEDEKRRNGVGEDKLFVGRRNKIYGKL 702
>gi|313246745|emb|CBY35616.1| unnamed protein product [Oikopleura dioica]
Length = 853
Score = 520 bits (1340), Expect = e-145, Method: Compositional matrix adjust.
Identities = 305/713 (42%), Positives = 409/713 (57%), Gaps = 92/713 (12%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPAF+RWL R +V+ VEE PQ + +GV P+D+S NPNG+EFDNLY+DMNG+I
Sbjct: 1 MGVPAFFRWLQRRCGSIVVNCVEE-PQKEIDGVTVPIDLSGANPNGVEFDNLYIDMNGVI 59
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ +PAP + +++F+ IFD +D + +VRPRKLLYLAIDG APRAKMNQQR+RRF
Sbjct: 60 HPCSHPEDRPAPRNEEEIFECIFDALDRMMNIVRPRKLLYLAIDGPAPRAKMNQQRSRRF 119
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKE-KPETCDSNVITPGTQFMAVLSAALQYFI 179
RAAK++ + + E E AG L + K E DSN ITPGT+FM L+ AL+++I
Sbjct: 120 RAAKESVQLSELMAEKKLEIERAGGRLPPPDPKKEKFDSNCITPGTEFMDRLAKALRFYI 179
Query: 180 QARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIM 239
RLN+ GWQ VILSDA+VPGEGEHKI+ YIR QRN P DPNT HC++G DADLIM
Sbjct: 180 SERLNKEAGWQELNVILSDASVPGEGEHKIIDYIRKQRNTPTHDPNTHHCIWGADADLIM 239
Query: 240 LSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDT--PI 297
L LATHE +F+I+RE G+ + C +CGQ GH +C G P GV+D P+
Sbjct: 240 LGLATHEPNFTIVREEFVY-GKPKPCVLCGQCGHELIDCLGLP-------EGVEDKEPPV 291
Query: 298 H-KKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEI 356
K Y F+ I +RE++ EL IPN P + E I+DD++ LCFFVGNDFLPH+P+L I
Sbjct: 292 FLKGNYIFIRIATVREWIAQELQIPNIPITWDLENIIDDWILLCFFVGNDFLPHLPSLSI 351
Query: 357 REGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQ-QAY 415
REGAI+ L+ +Y+R M Y+T G V L VE ++S+ ED IF+KR + + Q
Sbjct: 352 REGAIDKLVGIYKRTVCEMKSYMTKDGTVNLKAVEFVMRSIGRMEDAIFKKRRQEECQRR 411
Query: 416 EYNEAMKLNAR--RESSEELLQAPVAVADTV----------------------KLGEPGY 451
+E K R R + ++ Q PVA + + ++ +
Sbjct: 412 VRDERRKHQDRNKRLNRNQVHQTPVAKSGVMEPKMVNQHQRKAKAHDLNKTARQIRQEAA 471
Query: 452 KERYYADKFEISNPEEID-----KVK--------------KDVVLKYVEGLCWVCRYY-- 490
+ R A K E + E+I K + +D V + +G W RY+
Sbjct: 472 EARLTAAKLEDQDTEQITLSALAKARAMQARQNDNSALDAEDEVRLFEDG--WKDRYFRT 529
Query: 491 ------------------YQDVCSWQWFY------------PYHYAPFASDLKDLSDLEI 520
Y + W + Y PYHYAPFASD L +EI
Sbjct: 530 KFDVSADDNDFKRAVVGAYTEGLCWVFAYYFQGCLDWGWYYPYHYAPFASDFVHLDSVEI 589
Query: 521 TFFL-GEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFA 579
+ +P +P +QLM PA S LP +R LM+DP S I YP DF +D+NGK+F
Sbjct: 590 NWQRDAKPRKPLEQLMCVFPAGSGEFLPPSWRKLMSDPDSQIIDMYPTDFVVDLNGKKFE 649
Query: 580 WQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVHPQHPLYQQI 632
W GV LPF+DE L R K+ LTE+E RN V D L+V ++ +Y ++
Sbjct: 650 WMGVALLPFLDEARLHRTLAKVYGDLTEDEKRRNGVGEDKLFVGRRNKIYGKL 702
>gi|402883353|ref|XP_003905184.1| PREDICTED: 5'-3' exoribonuclease 2 isoform 2 [Papio anubis]
Length = 971
Score = 520 bits (1338), Expect = e-144, Method: Compositional matrix adjust.
Identities = 309/732 (42%), Positives = 412/732 (56%), Gaps = 82/732 (11%)
Query: 32 GVARPVDVSKPNPNGMEFDNLYLDMNGIIHPCFHPDGKPAPTSYDDVFKSIFDYIDHIFL 91
GV PVD SKPNPN +EFDNLYLDMNGIIHPC HP+ KPAP + D++ +IF+YID +F
Sbjct: 52 GVKIPVDASKPNPNDVEFDNLYLDMNGIIHPCTHPEDKPAPKNEDEMMVAIFEYIDRLFS 111
Query: 92 LVRPRKLLYLAIDGVAPRAKMNQQRTRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKE 151
+VRPR+LLY+AIDGVAPRAKMNQQR+RRFRA+K+ EA E++R+R+E G L +E
Sbjct: 112 IVRPRRLLYMAIDGVAPRAKMNQQRSRRFRASKEGMEAAVEKQRVREEILAKGGFLPPEE 171
Query: 152 KPETCDSNVITPGTQFMAVLSAALQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMS 211
E DSN ITPGT+FM L+ L+Y+I RLN PGW+ VILSDA+ PGEGEHKIM
Sbjct: 172 IKERFDSNCITPGTEFMDNLAKCLRYYIADRLNNDPGWKNLTVILSDASAPGEGEHKIMD 231
Query: 212 YIRLQRNLPGFDPNTRHCLYGLDADLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQV 271
YIR QR P DPNT HCL G DADLIML LATHE +F+I+RE P + + C +C Q
Sbjct: 232 YIRRQRAQPNHDPNTHHCLCGADADLIMLGLATHEPNFTIIREEFK-PNKPKPCGLCNQF 290
Query: 272 GHLAAECHGKPGDNPADWNGVDDT-PIHKKKYQFLNIWVLREYLQYELDIPNPPFPINFE 330
GH +C G P + + + D+ P + ++ FL + VLREYL+ EL + + PF + E
Sbjct: 291 GHEVKDCEGLPREKKGKHDELADSLPCAEGEFIFLRLNVLREYLERELTMASLPFTFDVE 350
Query: 331 RIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRV 390
R +DD+VF+CFFVGNDFLPH+P+LEIRE AI+ L+++Y+ GGYLT++G V L RV
Sbjct: 351 RSIDDWVFMCFFVGNDFLPHLPSLEIRENAIDRLVNIYKNVVHKTGGYLTESGYVNLQRV 410
Query: 391 EKFIQSVAVYEDQIFQKRTRIQQAYEYNEAM---------------------KLNARRES 429
+ + +V ED IF+KR + ++ + L +R
Sbjct: 411 QMIMLAVGEVEDSIFKKRKDDEDSFRRRQKEKRKRMKRDQPAFTPSGILTPHALGSRNSP 470
Query: 430 SEELLQAPVAVADTVKLGEPGYKERYYADKFEI-SNPEEIDKVKK------------DVV 476
++ P A +++ F +P I +K+ D V
Sbjct: 471 GSQVASNPRQAAYEMRMQNNSSPSISPNTSFTSDGSPSPIGGIKRKAEDSDSEPEPEDNV 530
Query: 477 LKYVEGLCWVCRYY--------------------YQDVCSWQWFYPYH-------YAPF- 508
+ G W RYY Y + W Y Y Y PF
Sbjct: 531 RLWEAG--WKQRYYKNKFDVDAADEKFRRKVVQSYVEGLCWVLRYYYQGCASWKWYYPFH 588
Query: 509 ----ASDLKDLSDLEITFFLG-EPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYK 563
ASD + ++D+ F G +PF+P +QLMG PAAS + LP +R LM+DP S I
Sbjct: 589 YAPFASDFEGIADMPSDFEKGTKPFKPLEQLMGVFPAASGNFLPPSWRKLMSDPDSSIID 648
Query: 564 FYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVH 623
FYP DF ID+NGK++AWQGV LPF+DE+ L +++ LT EE RNS+ D+L+V
Sbjct: 649 FYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEETRRNSLGGDVLFVG 708
Query: 624 PQHPLYQQITLYCQLYHQLPPQDRFAWEIDV--NASGGMNGYIWLCERNGL-RSIIPSPV 680
HPL+ I Q P +DV G+ G L E L I+ SPV
Sbjct: 709 KHHPLHDFILELYQTGSTEP--------VDVPPELCHGIQGKFSLDEEAILPDQIVCSPV 760
Query: 681 KGLPDIERNQAM 692
L D+ +N +
Sbjct: 761 PMLRDLTQNTVV 772
>gi|332858060|ref|XP_001145469.2| PREDICTED: 5'-3' exoribonuclease 2 isoform 5 [Pan troglodytes]
gi|397478697|ref|XP_003810676.1| PREDICTED: 5'-3' exoribonuclease 2 isoform 3 [Pan paniscus]
Length = 1028
Score = 518 bits (1335), Expect = e-144, Method: Compositional matrix adjust.
Identities = 308/732 (42%), Positives = 412/732 (56%), Gaps = 82/732 (11%)
Query: 32 GVARPVDVSKPNPNGMEFDNLYLDMNGIIHPCFHPDGKPAPTSYDDVFKSIFDYIDHIFL 91
GV PVD SKPNPN +EFDNLYLDMNGIIHPC HP+ KPAP + D++ +IF+YID +F
Sbjct: 109 GVKIPVDASKPNPNDVEFDNLYLDMNGIIHPCTHPEDKPAPKNEDEMMVAIFEYIDRLFS 168
Query: 92 LVRPRKLLYLAIDGVAPRAKMNQQRTRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKE 151
+VRPR+LLY+AIDGVAPRAKMNQQR+RRFRA+K+ EA E++R+R+E G L +E
Sbjct: 169 IVRPRRLLYMAIDGVAPRAKMNQQRSRRFRASKEGMEAAVEKQRVREEILAKGGFLPPEE 228
Query: 152 KPETCDSNVITPGTQFMAVLSAALQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMS 211
E DSN ITPGT+FM L+ L+Y+I RLN PGW+ VILSDA+ PGEGEHKIM
Sbjct: 229 IKERFDSNCITPGTEFMDNLAKCLRYYIADRLNNDPGWKNLTVILSDASAPGEGEHKIMD 288
Query: 212 YIRLQRNLPGFDPNTRHCLYGLDADLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQV 271
YIR QR P DPNT HCL G DADLIML LATHE +F+I+RE P + + C +C Q
Sbjct: 289 YIRRQRAQPNHDPNTHHCLCGADADLIMLGLATHEPNFTIIREEFK-PNKPKPCGLCNQF 347
Query: 272 GHLAAECHGKPGDNPADWNGVDDT-PIHKKKYQFLNIWVLREYLQYELDIPNPPFPINFE 330
GH +C G P + + + D+ P + ++ FL + VLREYL+ EL + + PF + E
Sbjct: 348 GHEVKDCEGLPREKKGKHDELADSLPCAEGEFIFLRLNVLREYLERELTMASLPFTFDVE 407
Query: 331 RIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRV 390
R +DD+VF+CFFVGNDFLPH+P+LEIRE AI+ L+++Y+ GGYLT++G V L RV
Sbjct: 408 RSIDDWVFMCFFVGNDFLPHLPSLEIRENAIDRLVNIYKNVVHKTGGYLTESGYVNLQRV 467
Query: 391 EKFIQSVAVYEDQIFQKRTRIQQAYEYNEAM---------------------KLNARRES 429
+ + +V ED IF+KR + ++ + L +R
Sbjct: 468 QMIMLAVGEVEDSIFKKRKDDEDSFRRRQKEKRKRMKRDQPAFTPSGILTPHALGSRNSP 527
Query: 430 SEELLQAPVAVADTVKLGEPGYKERYYADKFEI-SNPEEIDKVKK------------DVV 476
++ P A +++ F +P + +K+ D V
Sbjct: 528 GSQVASNPRQAAYEMRMQNNSSPSISPNTSFTSDGSPSPLGGIKRKAEDSDSEPEPEDNV 587
Query: 477 LKYVEGLCWVCRYY--------------------YQDVCSWQWFYPYH-------YAPF- 508
+ G W RYY Y + W Y Y Y PF
Sbjct: 588 RLWEAG--WKQRYYKNKFDVDAADEKFRRKVVQSYVEGLCWVLRYYYQGCASWKWYYPFH 645
Query: 509 ----ASDLKDLSDLEITFFLG-EPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYK 563
ASD + ++D+ F G +PF+P +QLMG PAAS + LP +R LM+DP S I
Sbjct: 646 YAPFASDFEGIADMPSDFEKGTKPFKPLEQLMGVFPAASGNFLPPSWRKLMSDPDSSIID 705
Query: 564 FYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVH 623
FYP DF ID+NGK++AWQGV LPF+DE+ L +++ LT EE RNS+ D+L+V
Sbjct: 706 FYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEETRRNSLGGDVLFVG 765
Query: 624 PQHPLYQQITLYCQLYHQLPPQDRFAWEIDV--NASGGMNGYIWLCERNGL-RSIIPSPV 680
HPL+ I Q P +DV G+ G L E L I+ SPV
Sbjct: 766 KHHPLHDFILELYQTGSTEP--------VDVPPELCHGIQGKFSLDEEAILPDQIVCSPV 817
Query: 681 KGLPDIERNQAM 692
L D+ +N +
Sbjct: 818 PMLRDLTQNTVV 829
>gi|296200320|ref|XP_002747536.1| PREDICTED: 5'-3' exoribonuclease 2 isoform 4 [Callithrix jacchus]
Length = 874
Score = 512 bits (1318), Expect = e-142, Method: Compositional matrix adjust.
Identities = 294/683 (43%), Positives = 393/683 (57%), Gaps = 82/683 (12%)
Query: 81 SIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRFRAAKDAAEAEAEEERLRKEF 140
+IF+YID +F +VRPR+LLY+AIDGVAPRAKMNQQR+RRFRA+K+ EA E++R+R+E
Sbjct: 4 AIFEYIDRLFSIVRPRRLLYMAIDGVAPRAKMNQQRSRRFRASKEGMEAAVEKQRVREEI 63
Query: 141 EEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQARLNQIPGWQFTKVILSDAN 200
G L +E E DSN ITPGT+FM L+ L+Y+I RLN PGW+ VILSDA+
Sbjct: 64 LAKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIADRLNNDPGWKNLTVILSDAS 123
Query: 201 VPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIMLSLATHEIHFSILREVITLPG 260
PGEGEHKIM YIR QR P DPNT HCL G DADLIML LATHE +F+I+RE P
Sbjct: 124 APGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLGLATHEPNFTIIREEFK-PN 182
Query: 261 QQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDT-PIHKKKYQFLNIWVLREYLQYELD 319
+ + C +C Q GH +C G P + + + D+ P + ++ FL + VLREYL+ EL
Sbjct: 183 KPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEGEFIFLRLNVLREYLERELT 242
Query: 320 IPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHVYRREFTAMGGYL 379
+ + PF + ER +DD+VF+CFFVGNDFLPH+P+LEIREGAI+ L+++Y+ GGYL
Sbjct: 243 MASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREGAIDRLVNIYKNVVHKTGGYL 302
Query: 380 TDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYEYNEAM------------------ 421
T++G V L RV+ + +V ED IF+KR + ++ +
Sbjct: 303 TESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSFRRRQKEKRKRMKRDQPAFTPTGIL 362
Query: 422 ---KLNARRESSEELLQAPVAVADTVKL-----------------GEP---GYKERYYAD 458
L +R S ++ P A +++ G P G +R D
Sbjct: 363 TPHALGSRNSPSSQVANNPRQAAYEMRMQNNSSPSVSPNTSFTSDGSPSPIGGIKRKAED 422
Query: 459 KFEISNPEEIDKVK-------------------------KDVVLKYVEGLCWVCRYYYQD 493
S PE D V+ + VV YVEGLCWV RYYYQ
Sbjct: 423 S--DSEPEPEDNVRLWEAGWKQRYYKNKFDVDAADEKFRRKVVQSYVEGLCWVLRYYYQG 480
Query: 494 VCSWQWFYPYHYAPFASDLKDLSDLEITFFLG-EPFRPFDQLMGTLPAASSSALPEKYRN 552
SW+W+YP+HYAPFASD + ++D+ F G +PF+P +QLMG PAAS + LP +R
Sbjct: 481 CASWKWYYPFHYAPFASDFEGIADMPSDFEKGTKPFKPLEQLMGVFPAASGNFLPPSWRK 540
Query: 553 LMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFR 612
LM+DP S I FYP DF ID+NGK++AWQGV LPF+DE+ L +++ LT EE R
Sbjct: 541 LMSDPDSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEETRR 600
Query: 613 NSVMLDLLYVHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDV--NASGGMNGYIWLCERN 670
NS+ D+L+V HPL+ I Q P +DV G+ G L E
Sbjct: 601 NSLGGDVLFVGKHHPLHDFILELYQTGSTEP--------VDVPPELCHGIQGKFSLDEEA 652
Query: 671 GL-RSIIPSPVKGLPDIERNQAM 692
L I+ SPV L D+ +N +
Sbjct: 653 ILPDQIVCSPVPMLRDLTQNTVV 675
>gi|429329440|gb|AFZ81199.1| 5'->3' exoribonuclease, putative [Babesia equi]
Length = 828
Score = 511 bits (1317), Expect = e-142, Method: Compositional matrix adjust.
Identities = 291/671 (43%), Positives = 405/671 (60%), Gaps = 57/671 (8%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVE--EDPQVDGEGVAR-PVDVSKPNPNGMEFDNLYLDMN 57
MGVP FYRWL +RYP D ++ ++ +D + VD+ PNPNG EFDNLYLDMN
Sbjct: 1 MGVPTFYRWLCNRYPRVPKDTIDNYKETSIDMSNIETIGVDLLSPNPNG-EFDNLYLDMN 59
Query: 58 GIIHPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRT 117
GIIHPC HP+ P S + +F+ IFDYID IF +VRPRK+++LAIDGVAPRAK+NQQR+
Sbjct: 60 GIIHPCCHPENMEQPESEEVMFECIFDYIDRIFYIVRPRKIMFLAIDGVAPRAKINQQRS 119
Query: 118 RRFRAAKDAAEAEAEEERLRKEFEEAGKLLS-AKEKPETCDSNVITPGTQFMAVLSAALQ 176
RRF K AA+A+ E+E K EE GK + + DSNVITPGT FM LS +
Sbjct: 120 RRF---KSAADADLEDEVYNKLVEEFGKKKGDIPIRKDKWDSNVITPGTPFMHELSKRIV 176
Query: 177 YFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDAD 236
+IQ R+ + W+ VI SD+ VPGEGEHKIM +IR QR+ P +DPNT+H L+G+DAD
Sbjct: 177 DYIQDRIEKYDAWKRITVIFSDSGVPGEGEHKIMKFIRNQRHAPNYDPNTKHVLHGMDAD 236
Query: 237 LIMLSLATHEIHFSILREVIT-LPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDT 295
LIML LATHE++F ILRE++T + + V Q+ + P + P + +
Sbjct: 237 LIMLGLATHEVNFFILREIVTNFINFKPEDNVANQIEQAKSVV---PKEKPTSSHQQYIS 293
Query: 296 PIHK--KKYQFLNIWVLREYLQYELDIPNP----PFPINFERIVDDFVFLCFFVGNDFLP 349
+ + K QFL + VLREYL Y+L PN I+FER VDD V +CFF GNDFLP
Sbjct: 294 LMRQSWKPMQFLQLPVLREYLSYQLHFPNGWRDREGVIDFERCVDDLVLMCFFCGNDFLP 353
Query: 350 HMPTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQK-- 407
H+P++ I G+I+ ++ +Y++ +G YL++ G++ + +V F+ ++ E+Q+F++
Sbjct: 354 HLPSISITGGSIDQMILLYQKILPDLGDYLSNEGDLNMPQVGSFVSYLSKIENQVFKQAQ 413
Query: 408 --------------RTRIQQAYEYNEAMKLNARRES----------------SEELLQAP 437
+ I Q N+ KL+ S EE+L+
Sbjct: 414 EHKERYKRKMQQNGNSEIAQFGNVNKNRKLDDGSASVEPKEEGYTEAEFKRRQEEILKQE 473
Query: 438 VAVAD-----TVKLGEPG-YKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYY 491
V D + L +P +KE YY +KF + +++ + +VV YVEGL WV +YYY
Sbjct: 474 RTVEDPKEPIDLSLNDPKLWKEAYYREKFNLGPNDDVTSLVNNVVFHYVEGLAWVLKYYY 533
Query: 492 QDVCSWQWFYPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYR 551
Q SW WFYP+HYAPF SDLK L+I F LG+PF F QLM +P SS LP+++R
Sbjct: 534 QGCVSWGWFYPFHYAPFCSDLK-FEGLDIKFELGKPFTAFQQLMSVMPIRSSHCLPKEFR 592
Query: 552 NLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELF 611
LMTD +SP+ FYP F+ D NGKR+ +Q V LPFIDEK LL + +E L++ +
Sbjct: 593 ELMTDSNSPLADFYPLKFKEDPNGKRYKYQWVALLPFIDEKRLLNIVEPIEKSLSKVDKD 652
Query: 612 RNSVMLDLLYV 622
RN++ DL+++
Sbjct: 653 RNAISKDLIFM 663
>gi|403283599|ref|XP_003933202.1| PREDICTED: 5'-3' exoribonuclease 2 isoform 2 [Saimiri boliviensis
boliviensis]
Length = 874
Score = 511 bits (1317), Expect = e-142, Method: Compositional matrix adjust.
Identities = 294/683 (43%), Positives = 393/683 (57%), Gaps = 82/683 (12%)
Query: 81 SIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRFRAAKDAAEAEAEEERLRKEF 140
+IF+YID +F +VRPR+LLY+AIDGVAPRAKMNQQR+RRFRA+K+ EA E++R+R+E
Sbjct: 4 AIFEYIDRLFSIVRPRRLLYMAIDGVAPRAKMNQQRSRRFRASKEGMEAAVEKQRVREEI 63
Query: 141 EEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQARLNQIPGWQFTKVILSDAN 200
G L +E E DSN ITPGT+FM L+ L+Y+I RLN PGW+ VILSDA+
Sbjct: 64 LAKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIADRLNNDPGWKNLTVILSDAS 123
Query: 201 VPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIMLSLATHEIHFSILREVITLPG 260
PGEGEHKIM YIR QR P DPNT HCL G DADLIML LATHE +F+I+RE P
Sbjct: 124 APGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLGLATHEPNFTIIREEFK-PN 182
Query: 261 QQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDT-PIHKKKYQFLNIWVLREYLQYELD 319
+ + C +C Q GH +C G P + + + D+ P + ++ FL + VLREYL+ EL
Sbjct: 183 KPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEGEFIFLRLNVLREYLERELT 242
Query: 320 IPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHVYRREFTAMGGYL 379
+ + PF + ER +DD+VF+CFFVGNDFLPH+P+LEIREGAI+ L+++Y+ GGYL
Sbjct: 243 MASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREGAIDRLVNIYKNVVHKTGGYL 302
Query: 380 TDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYEYNEAM------------------ 421
T++G V L RV+ + +V ED IF+KR + ++ +
Sbjct: 303 TESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSFRRRQKEKRKRMKRDQPAFTPTGIL 362
Query: 422 ---KLNARRESSEELLQAPVAVADTVKL-----------------GEP---GYKERYYAD 458
L +R S ++ P A +++ G P G +R D
Sbjct: 363 TPHALGSRNSPSSQVASNPRQAAYEMRMQNNSSPSVSPNTSFTSDGSPSPIGGIKRKAED 422
Query: 459 KFEISNPEEIDKVK-------------------------KDVVLKYVEGLCWVCRYYYQD 493
S PE D V+ + VV YVEGLCWV RYYYQ
Sbjct: 423 S--DSEPEPEDNVRLWEAGWKQRYYKNKFDVDAADEKFRRKVVQSYVEGLCWVLRYYYQG 480
Query: 494 VCSWQWFYPYHYAPFASDLKDLSDLEITFFLG-EPFRPFDQLMGTLPAASSSALPEKYRN 552
SW+W+YP+HYAPFASD + ++D+ F G +PF+P +QLMG PAAS + LP +R
Sbjct: 481 CASWKWYYPFHYAPFASDFEGIADMPSDFEKGTKPFKPLEQLMGVFPAASGNFLPPSWRK 540
Query: 553 LMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFR 612
LM+DP S I FYP DF ID+NGK++AWQGV LPF+DE+ L +++ LT EE R
Sbjct: 541 LMSDPDSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEETRR 600
Query: 613 NSVMLDLLYVHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDV--NASGGMNGYIWLCERN 670
NS+ D+L+V HPL+ I Q P +DV G+ G L E
Sbjct: 601 NSLGGDVLFVGKHHPLHDFILELYQTGSTEP--------VDVPPELCHGIQGKFSLDEEA 652
Query: 671 GL-RSIIPSPVKGLPDIERNQAM 692
L I+ SPV L D+ +N +
Sbjct: 653 ILPDRIVCSPVPMLRDLTQNTVV 675
>gi|194382024|dbj|BAG64381.1| unnamed protein product [Homo sapiens]
Length = 874
Score = 511 bits (1317), Expect = e-142, Method: Compositional matrix adjust.
Identities = 292/681 (42%), Positives = 391/681 (57%), Gaps = 78/681 (11%)
Query: 81 SIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRFRAAKDAAEAEAEEERLRKEF 140
+IF+YID +F +VRPR+LLY+AIDGVAPRAKMNQQR+RRFRA+K+ EA E++R+R+E
Sbjct: 4 AIFEYIDRLFSIVRPRRLLYMAIDGVAPRAKMNQQRSRRFRASKEGMEAAVEKQRVREEI 63
Query: 141 EEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQARLNQIPGWQFTKVILSDAN 200
G L +E E DSN ITPGT+FM L+ L+Y+I RLN PGW+ VILSDA+
Sbjct: 64 LAKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIADRLNNDPGWKNLTVILSDAS 123
Query: 201 VPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIMLSLATHEIHFSILREVITLPG 260
PGEGEHKIM YIR QR P DPNT HCL G DADLIML LATHE +F+I+RE P
Sbjct: 124 APGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLGLATHEPNFTIIREEFK-PN 182
Query: 261 QQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDT-PIHKKKYQFLNIWVLREYLQYELD 319
+ + C +C Q GH +C G P + + + D+ P + ++ FL + VLREYL+ EL
Sbjct: 183 KPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEGEFIFLRLNVLREYLERELT 242
Query: 320 IPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHVYRREFTAMGGYL 379
+ + PF + ER +DD+VF+CFFVGNDFLPH+P+LEIRE AI+ L+++Y+ GGYL
Sbjct: 243 MASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIRENAIDRLVNIYKNVVHKTGGYL 302
Query: 380 TDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYEYNEAM------------------ 421
T++G V L RV+ + +V ED IF+KR + ++ +
Sbjct: 303 TESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSFRRRQKEKRKRMKRDQPAFTPSGIL 362
Query: 422 ---KLNARRESSEELLQAPVAVADTVKL-----------------GEP---GYKERYYAD 458
L +R S ++ P A +++ G P G +R D
Sbjct: 363 TPHALGSRNSSGSQVASNPRQAAYEMRMQNNSSPSISPNTSFTSDGSPSPLGGIKRKAED 422
Query: 459 KFEISNPEEIDKVK-------------------------KDVVLKYVEGLCWVCRYYYQD 493
S PE D V+ + VV YVEGLCWV RYYYQ
Sbjct: 423 S--DSEPEPEDNVRLWEAGWKQRYYKNKFDVDAADEKFRRKVVQSYVEGLCWVLRYYYQG 480
Query: 494 VCSWQWFYPYHYAPFASDLKDLSDLEITFFLG-EPFRPFDQLMGTLPAASSSALPEKYRN 552
SW+W+YP+HYAPFASD + ++D+ F G +PF+P +QLMG PAAS + LP +R
Sbjct: 481 CASWKWYYPFHYAPFASDFEGIADMPSDFEKGTKPFKPLEQLMGVFPAASGNFLPPSWRK 540
Query: 553 LMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFR 612
LM+DP S I FYP DF ID+NGK++AWQGV LPF+DE+ L +++ LT EE R
Sbjct: 541 LMSDPDSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEETRR 600
Query: 613 NSVMLDLLYVHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVNASGGMNGYIWLCERNGL 672
NS+ D+L+V HPL+ I Q P E+ G+ G L E L
Sbjct: 601 NSLGGDVLFVGKHHPLHDFILELYQTGSTEP------VEVPPELCHGIQGKFSLDEEAIL 654
Query: 673 -RSIIPSPVKGLPDIERNQAM 692
I+ SPV L D+ +N +
Sbjct: 655 PDQIVCSPVPMLRDLTQNTVV 675
>gi|183235666|ref|XP_657072.2| 5'-3' exonuclease domain containing protein [Entamoeba histolytica
HM-1:IMSS]
gi|169800426|gb|EAL51687.2| 5'-3' exonuclease domain containing protein [Entamoeba histolytica
HM-1:IMSS]
gi|449701673|gb|EMD42445.1| 5'3' exonuclease domain containing protein [Entamoeba histolytica
KU27]
Length = 937
Score = 510 bits (1314), Expect = e-142, Method: Compositional matrix adjust.
Identities = 289/664 (43%), Positives = 399/664 (60%), Gaps = 83/664 (12%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP+F+RWL+ ++P I+D + G + D+++PN NG+E+DN Y+DMNG+I
Sbjct: 31 MGVPSFFRWLSQKFP-KIIDGCQ------GSFHEQYNDLNEPNFNGVEYDNFYIDMNGLI 83
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPCFHP + +P + +D+ + Y+D++ +VRPRKLLYLA+DGVAPRAKMNQQR+RRF
Sbjct: 84 HPCFHPQDRQSPETIEDMMVMLGRYLDYLIDIVRPRKLLYLAVDGVAPRAKMNQQRSRRF 143
Query: 121 RAAKDAAEAE---AEEER--LRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAAL 175
++AKDA AE AEE R +R E + KP DSN ITPGT+FM+V+S L
Sbjct: 144 KSAKDAENAELKHAEENRNKVRNGLPEVPYI-----KP--LDSNCITPGTEFMSVVSKTL 196
Query: 176 QYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDA 235
+ +I+ R++Q W VILSD+ VPGEGEHKIM +IR Q+ P ++PN HC+YGLDA
Sbjct: 197 KKYIKERMSQSSYWNKLVVILSDSGVPGEGEHKIMDFIRRQKESPDYNPNIHHCMYGLDA 256
Query: 236 DLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAEC-HGKPGDNPADWNGVDD 294
DLIMLSLATHE FSI+RE + +QE+C++C + H +C H K G D
Sbjct: 257 DLIMLSLATHERFFSIIREKVFF--EQEQCYICNNI-HSPDKCPHRKEV-------GAMD 306
Query: 295 TPIHKKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTL 354
T K +QFL+ +LR YLQ L + FER VDDF+F CF VGNDFLPH+P+L
Sbjct: 307 TIT--KPFQFLHCHILRGYLQITLKVEG----FEFERCVDDFIFFCFLVGNDFLPHIPSL 360
Query: 355 EIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQA 414
+IR+GA++LLM VY REF GGY+T++G + + + F+Q V E I +K+ + ++
Sbjct: 361 DIRDGAVDLLMKVY-REFLPHGGYITESGSLNVTNAKNFLQEVGKEEPAILEKKCQKEKN 419
Query: 415 Y------------------------------------EYNEAMKLN----ARRESSEELL 434
Y E E +K + E E L
Sbjct: 420 YAKRRLDNQIRELEIKKANVYENSTLKSTESINTLTPEQQEQLKTQEAEIKKIEDEERKL 479
Query: 435 QAPV---AVADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYY 491
+A + D VKLGEPGY +RYY+ KF+I ++ K+ +D+V Y EG+ WV YYY
Sbjct: 480 RADFEQKELTDEVKLGEPGYTQRYYSVKFKIDPQKDTQKI-RDIVHSYFEGMNWVLGYYY 538
Query: 492 QDVCSWQWFYPYHYAPFASDLKDLSD--LEITFFLGEPFRPFDQLMGTLPAASSSALPEK 549
+ SW W+YPY YAPFA D+ + D EI + PFRPF+QLM LP S S LP +
Sbjct: 539 KGCQSWDWYYPYLYAPFAEDMGEYVDYNFEIKYKESIPFRPFEQLMSVLPPRSKSCLPYQ 598
Query: 550 YRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEE 609
+ +LM SPI FYP F++D NG++ ++ +V L FID++ LL + +E+ LT E
Sbjct: 599 FHDLMKSKGSPISDFYPDTFELDFNGEKVDYKAIVVLTFIDQEKLLHYVEPIEMGLTGEL 658
Query: 610 LFRN 613
RN
Sbjct: 659 RQRN 662
>gi|183233323|ref|XP_001913842.1| 5'-3' exonuclease domain containing protein [Entamoeba histolytica
HM-1:IMSS]
gi|169801637|gb|EDS89385.1| 5'-3' exonuclease domain containing protein [Entamoeba histolytica
HM-1:IMSS]
Length = 869
Score = 508 bits (1308), Expect = e-141, Method: Compositional matrix adjust.
Identities = 282/661 (42%), Positives = 396/661 (59%), Gaps = 77/661 (11%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP+F+RWL R+P IVD + G D+++PN NG+E+DN Y+DMNG+I
Sbjct: 1 MGVPSFFRWLKQRFPKIIVDCQPSSQEKYG-------DLNEPNANGVEYDNFYIDMNGLI 53
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPCFHP + +P + +D+ + Y+D+I +VRPRKLLYLA+DGVAPRAKMNQQR+RRF
Sbjct: 54 HPCFHPQDRQSPETIEDMMVLLTRYLDYIIDIVRPRKLLYLAVDGVAPRAKMNQQRSRRF 113
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSA-KEKP--ETCDSNVITPGTQFMAVLSAALQY 177
++AKDA AE LR+ + +L++ E P + DSN ITPGT+FM+V+S L+
Sbjct: 114 KSAKDAENAE-----LRQAEDNKKRLMNGLPEVPYIKPLDSNCITPGTEFMSVVSKTLKR 168
Query: 178 FIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADL 237
+I+ R++Q W VILSD+ VPGEGEHKIM +IR Q+ P ++PN HC+YGLDADL
Sbjct: 169 YIKERMSQSSYWNKLVVILSDSGVPGEGEHKIMDFIRRQKESPDYNPNIHHCMYGLDADL 228
Query: 238 IMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPI 297
IMLSLATHE FSI+RE + + ++C++C V H +C + G DT I
Sbjct: 229 IMLSLATHERFFSIVREKVFF--EDDRCYICNGV-HPPDKCQRRKE------VGAMDTII 279
Query: 298 HKKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIR 357
K +QFL+ +LR YLQ L + FER VDDF+F CF VGNDFLPH+P+L+IR
Sbjct: 280 --KPFQFLHCHILRGYLQITLKVEG----FEFERCVDDFIFFCFLVGNDFLPHIPSLDIR 333
Query: 358 EGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRT---RIQQA 414
+GA++LLM VY REF GGY+T++G + + + F+Q V E I +K+ ++
Sbjct: 334 DGAVDLLMKVY-REFLPHGGYITESGSLNVTNAKNFLQEVGKEEPAILEKKCQKEKMNAK 392
Query: 415 YEYNEAMK-LNARR------------------------------------ESSEELLQAP 437
++ MK L R+ E E L+
Sbjct: 393 KNFDNQMKQLEMRKATIYKINTLKSTEGMNELTPEQQEQLKTQEAEIKLIEQKENRLKER 452
Query: 438 VAVADT---VKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDV 494
+ A+T +K+GE GY +RYY+ KF+I ++ K+ +D+V Y EG+ WV YYY+
Sbjct: 453 LKKAETKDLLKMGEVGYTQRYYSVKFKIDPKKDTQKI-RDIVHSYFEGMNWVLGYYYKGC 511
Query: 495 CSWQWFYPYHYAPFASDLKDLSD--LEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRN 552
SW W+YPY YAPFA D+ + D E + PFRPF+QLM LP S S LP+++ +
Sbjct: 512 QSWDWYYPYLYAPFAEDMGEYVDDNFEFKYKKSIPFRPFEQLMSVLPPRSKSCLPQQFHD 571
Query: 553 LMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFR 612
LM SPI +FYP F++D NG++ ++ +V L FID++ LL K +E L + R
Sbjct: 572 LMKSKGSPISEFYPDTFKLDFNGEKVDYKAIVVLTFIDQEKLLHYVKPIEKKLKGDAKRR 631
Query: 613 N 613
N
Sbjct: 632 N 632
>gi|449709403|gb|EMD48677.1| 5'3' exonuclease domain containing protein [Entamoeba histolytica
KU27]
Length = 869
Score = 507 bits (1305), Expect = e-141, Method: Compositional matrix adjust.
Identities = 282/661 (42%), Positives = 395/661 (59%), Gaps = 77/661 (11%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP+F+RWL R+P IVD + G D+++PN NG+E+DN Y+DMNG+I
Sbjct: 1 MGVPSFFRWLKQRFPKIIVDCQPSSQEKYG-------DLNEPNANGVEYDNFYIDMNGLI 53
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPCFHP + +P + +D+ + Y+D+I +VRPRKLLYLA+DGVAPRAKMNQQR+RRF
Sbjct: 54 HPCFHPQDRQSPETIEDMMVLLTRYLDYIIDIVRPRKLLYLAVDGVAPRAKMNQQRSRRF 113
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSA-KEKP--ETCDSNVITPGTQFMAVLSAALQY 177
++AKDA AE LR+ + +L++ E P + DSN ITPGT+FM+V+S L+
Sbjct: 114 KSAKDAENAE-----LRQAEDNKKRLMNGLPEVPYIKPLDSNCITPGTEFMSVVSKTLKR 168
Query: 178 FIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADL 237
+I+ R++Q W VILSD+ VPGEGEHKIM +IR Q+ P ++PN HC+YGLDADL
Sbjct: 169 YIKERMSQSSYWNKLVVILSDSGVPGEGEHKIMDFIRRQKESPDYNPNIHHCMYGLDADL 228
Query: 238 IMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPI 297
IMLSLATHE FSI+RE + + ++C++C V H +C + G DT I
Sbjct: 229 IMLSLATHERFFSIVREKVFF--EDDRCYICNGV-HPPDKCQRRKE------VGAMDTII 279
Query: 298 HKKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIR 357
K +QFL+ +LR YLQ L + FER VDDF+F CF VGNDFLPH+P+L+IR
Sbjct: 280 --KPFQFLHCHILRGYLQITLKVEG----FEFERCVDDFIFFCFLVGNDFLPHIPSLDIR 333
Query: 358 EGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRT---RIQQA 414
+GA++LLM VY REF GGY+T++G + + + F+Q V E I +K+ ++
Sbjct: 334 DGAVDLLMKVY-REFLPHGGYITESGSLNVTNAKNFLQEVGKEEPAILEKKCQKEKMNAK 392
Query: 415 YEYNEAMK-LNARR------------------------------------ESSEELLQAP 437
++ MK L R+ E E L+
Sbjct: 393 KNFDNQMKQLEMRKATIYKINTLKSTEGMNELTPEQQEQLKTQEAEIKLIEQKENRLKER 452
Query: 438 VAVADT---VKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDV 494
+ A+T +K+GE GY +RYY+ KF+I ++ K+ +D+V Y EG+ WV YYY+
Sbjct: 453 LKKAETKDLLKMGEVGYTQRYYSVKFKIDPKKDTQKI-RDIVHSYFEGMNWVLGYYYKGC 511
Query: 495 CSWQWFYPYHYAPFASDLKDLSD--LEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRN 552
SW W+YPY YAPFA D+ + D E + PFRPF+QLM LP S S LP ++ +
Sbjct: 512 QSWDWYYPYLYAPFAEDMGEYVDDNFEFKYKKSIPFRPFEQLMSVLPPRSKSCLPYQFHD 571
Query: 553 LMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFR 612
LM SPI +FYP F++D NG++ ++ +V L FID++ LL K +E L + R
Sbjct: 572 LMKSKGSPISEFYPDTFKLDFNGEKVDYKAIVVLTFIDQEKLLHYVKPIEKKLKGDAKRR 631
Query: 613 N 613
N
Sbjct: 632 N 632
>gi|431894120|gb|ELK03920.1| 5'-3' exoribonuclease 2 [Pteropus alecto]
Length = 1091
Score = 504 bits (1297), Expect = e-140, Method: Compositional matrix adjust.
Identities = 307/759 (40%), Positives = 412/759 (54%), Gaps = 107/759 (14%)
Query: 32 GVARPVDVSKPNPNGMEFDNLYLDMNGIIHPCFHPDGKPAPTSYDDVFKSIFDYIDHIFL 91
GV PVD SKPNPN +EFDNLYLDMNGIIHPC HP+ KPAP + D++ +IF+YID +F
Sbjct: 143 GVKIPVDASKPNPNDVEFDNLYLDMNGIIHPCTHPEDKPAPKNEDEMMVAIFEYIDRLFN 202
Query: 92 LVRPRKLLYLAIDGV-----------------------------APRAKMNQQRTRRFRA 122
+VRPR+LLY+AIDGV APRAKMNQQR+RRFRA
Sbjct: 203 IVRPRRLLYMAIDGVDKEYLEIDGQWKGMDGTDMGKEDLPDFSDAPRAKMNQQRSRRFRA 262
Query: 123 AKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQAR 182
+K+ EA E++R+R+E G L +E E DSN ITPGT+FM L+ L+Y+I R
Sbjct: 263 SKEGMEAAVEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIADR 322
Query: 183 LNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIMLSL 242
LN PGW+ VILSDA+ PGEGEHKIM YIR QR P DPNT HCL G DADLIML L
Sbjct: 323 LNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLGL 382
Query: 243 ATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDT-PIHKKK 301
ATHE +F+I+RE P + + C +C Q GH +C G P + + + D+ P + +
Sbjct: 383 ATHEPNFTIIREEFK-PNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEGE 441
Query: 302 YQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGAI 361
+ FL + VLREYL+ EL + + PF + ER +DD+VF+CFFVGNDFLPH+P+LEIREGAI
Sbjct: 442 FIFLRLNVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREGAI 501
Query: 362 NLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYEYNEAM 421
+ L+++Y+ GGYLT++G V L RV+ + +V ED IF+KR + ++ +
Sbjct: 502 DRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSFRRRQKE 561
Query: 422 ---------------------KLNARRESSEELLQAPVAVADTVKLGEPGYKERYYADKF 460
L +R ++ P A +++ F
Sbjct: 562 KRKRMKRDQPAFTPGGILTPHALGSRNSPGSQVASNPRQAAYEMRMQNNSSPSVSPNTSF 621
Query: 461 EI-SNPEEIDKVKK------------DVVLKYVEGLCWVCRYY----------------- 490
+P + +K+ D V + G W RYY
Sbjct: 622 TSDGSPSPLGGIKRKAEDSDSEPEPEDNVRLWEAG--WKQRYYKNKFDVDAADEKFRRKV 679
Query: 491 ---YQDVCSWQWFYPYH-------YAPF-----ASDLKDLSDLEITFFLG-EPFRPFDQL 534
Y + W Y Y Y PF ASD + ++D+ F G +PF+P +QL
Sbjct: 680 VQSYVEGLCWVLRYYYQGCASWKWYYPFHYAPFASDFEGIADMPSDFEKGTKPFKPLEQL 739
Query: 535 MGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLL 594
MG PAAS + LP +R LM+DP S I FYP DF ID+NGK++AWQGV LPF+DE+ L
Sbjct: 740 MGVFPAASGNFLPPSWRKLMSDPDSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRL 799
Query: 595 LRQTKKLEVFLTEEELFRNSVMLDLLYVHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDV 654
+++ LT EE RNS+ D+L+V H L+ I Q P ++
Sbjct: 800 RAALEEVYPDLTPEETRRNSLGGDVLFVGKHHLLHDFILQLYQTGSTEP------MDVPP 853
Query: 655 NASGGMNGYIWLCERNGL-RSIIPSPVKGLPDIERNQAM 692
G+ G L E L I+ SPV L D+ +N A+
Sbjct: 854 ELCHGIQGKFSLDEEAILPDQIVCSPVPMLRDLTQNVAI 892
>gi|167376304|ref|XP_001733946.1| 5'-3' exoribonuclease [Entamoeba dispar SAW760]
gi|165904779|gb|EDR29935.1| 5'-3' exoribonuclease, putative [Entamoeba dispar SAW760]
Length = 889
Score = 503 bits (1295), Expect = e-139, Method: Compositional matrix adjust.
Identities = 284/666 (42%), Positives = 396/666 (59%), Gaps = 87/666 (13%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP+F+RWL+ ++P I+D + G + D+++PN NG+E+DN Y+DMNG+I
Sbjct: 1 MGVPSFFRWLSQKFP-KIIDSCQ------GSFHEQYNDLNEPNFNGVEYDNFYIDMNGLI 53
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPCFHP + +P + +D+ + Y+D++ +VRPRKLLYLA+DGVAPRAKMNQQR+RRF
Sbjct: 54 HPCFHPQDRQSPETIEDMMVMLGRYLDYLIDIVRPRKLLYLAVDGVAPRAKMNQQRSRRF 113
Query: 121 RAAK---DAAEAEAEEERLRKEFEEAGKLLSAKEKP--ETCDSNVITPGTQFMAVLSAAL 175
++AK D +AEE R R + E P DSN ITPGT+FM+ +S AL
Sbjct: 114 KSAKEVDDNERKQAEENRNRV-------MNGLPEIPYVRPLDSNCITPGTEFMSAVSKAL 166
Query: 176 QYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDA 235
+ +I+ R++Q W VILSD+ VPGEGEHKIM +IR Q+ P ++PN HC+YGLDA
Sbjct: 167 KKYIKERMSQSSYWNKLVVILSDSGVPGEGEHKIMDFIRRQKESPDYNPNIHHCMYGLDA 226
Query: 236 DLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAEC-HGKPGDNPADWNGVDD 294
DLIMLSLATHE FSI+RE + +QE+C++C + H +C H K G D
Sbjct: 227 DLIMLSLATHERFFSIIREKVFF--EQEQCYICNGI-HSPDKCPHRKEV-------GALD 276
Query: 295 TPIHKKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTL 354
T I K +QFL+ +LR YLQ L + FER VDDF+F CF VGNDFLPH+P+L
Sbjct: 277 TII--KPFQFLHCHILRGYLQITLKVEG----FEFERCVDDFIFFCFLVGNDFLPHIPSL 330
Query: 355 EIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQA 414
+IR+GA++LLM VY REF GGY+T++G + + + F++ V E I + R + ++
Sbjct: 331 DIRDGAVDLLMKVY-REFLPHGGYITESGSLNVTNAKNFLREVGKEEPAILETRNKKEKN 389
Query: 415 Y------------------------------------EYNEAMKL---------NARRES 429
Y E E +K+ N R+
Sbjct: 390 YAKRRLDNQIRDLELKKANIYENSTLKSTESINSLTPEQQEQLKIQEAEIKSIENEERKL 449
Query: 430 SEELLQAPVAVADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRY 489
EE + ++D +KLGEPGY +RYY KF+I+ ++ KV +D+V Y EG+ WV Y
Sbjct: 450 REEFEKK--ELSDELKLGEPGYIQRYYNVKFKINPKKDTQKV-RDIVHSYFEGMNWVLGY 506
Query: 490 YYQDVCSWQWFYPYHYAPFASDLKDLSDLEITFFLGE--PFRPFDQLMGTLPAASSSALP 547
YY+ SW W+YPY YAPFA D+ + D T E PFRPF+QLM LP S S LP
Sbjct: 507 YYKGCQSWDWYYPYLYAPFAEDMGEYVDYNFTIKYKESIPFRPFEQLMSVLPPKSKSCLP 566
Query: 548 EKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTE 607
++ +LM SPI +FYP F++D NG++ ++ + L FID++ LL + +E+ LT
Sbjct: 567 YQFHDLMKSKGSPISEFYPDTFELDFNGEKVDYKAIAVLNFIDQEKLLHYVEPIEMELTG 626
Query: 608 EELFRN 613
E RN
Sbjct: 627 ELRQRN 632
>gi|115446147|ref|NP_001046853.1| Os02g0481900 [Oryza sativa Japonica Group]
gi|47848619|dbj|BAD22468.1| putative 5'-3' exoribonuclease [Oryza sativa Japonica Group]
gi|113536384|dbj|BAF08767.1| Os02g0481900 [Oryza sativa Japonica Group]
Length = 822
Score = 503 bits (1295), Expect = e-139, Method: Compositional matrix adjust.
Identities = 303/724 (41%), Positives = 414/724 (57%), Gaps = 122/724 (16%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MG+P+FYRWL +RYP SIV +E DG V +DNLYLDMN II
Sbjct: 1 MGIPSFYRWLVNRYP-SIVSPAKESRPADGIVV---------------YDNLYLDMNQII 44
Query: 61 HPCFHPDGK-------PAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMN 113
H FHP + APT+ +VF+S+FDY+D +F +VRPR+LLYLA+DGVAP AKMN
Sbjct: 45 HYSFHPQDQMNAGTDVCAPTTVSEVFESMFDYLDRLFRIVRPRRLLYLAVDGVAPCAKMN 104
Query: 114 -QQRTRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLS 172
+R RRF A +EEE ++K E D NVITPGT+FM +S
Sbjct: 105 GMRRGRRFAWA-------SEEEEMQKISEGVS------------DPNVITPGTEFMEKIS 145
Query: 173 AALQYFIQARLNQI-PGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLY 231
AL Y+I+ARLN PGW+ VILSDANVPGEGEHKIMS+IR QR++ G+DPNTRHCL+
Sbjct: 146 QALTYYIRARLNSSDPGWKHIMVILSDANVPGEGEHKIMSFIRAQRSMEGYDPNTRHCLF 205
Query: 232 GLDADLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNG 291
G DADLIML+LA+HE+HFSILRE DN
Sbjct: 206 GHDADLIMLALASHEVHFSILRE-----------------------------DNS---QL 233
Query: 292 VDDTPIHKKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHM 351
+ P +K+Y FLNIWVLREYL+ EL I +P + ER++DDF+F+CF +GNDF+PH+
Sbjct: 234 TEADP--EKQYLFLNIWVLREYLEIELKILDPVCEPDIERLIDDFIFICFLMGNDFIPHI 291
Query: 352 PTLEIREGAINLLMHVYRREFTAMGGYLTD--------AGEVLLDRVEKFIQSVAVYEDQ 403
P+LE++E A++LL+ VY+ F MGGY+ + A + + R+E F +++YE++
Sbjct: 292 PSLEMKEYALDLLIEVYKTTFNKMGGYIVNIEKVKDKHAAYLEVSRLEIFFHQLSMYEEK 351
Query: 404 IFQKRTRIQQAYEYNEAMKLNAR---RESSE-ELLQAPVAVAD----------TVKLGEP 449
IF KR ++Q E++K + R RE+SE E L+ + D ++LG P
Sbjct: 352 IFLKRYELEQ-----ESLKKSCRDVLREASESERLELSRKLEDRFFNEERPYDKLRLGLP 406
Query: 450 GYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFA 509
G+K R+Y + F I EI ++ D+ KY+EGLCW+ +YY DV SW W+YP++ APF
Sbjct: 407 GWKSRFYREYFGIETSNEIGNLQNDMAQKYLEGLCWMLQYYLADVPSWSWYYPFYVAPFV 466
Query: 510 SDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDF 569
SDLK EI+F + +P RPFDQLM LP SS ALPE YR +M +F P
Sbjct: 467 SDLKSNCRFEISFTVDKPLRPFDQLMAVLPLRSSCALPECYRKVMGRK-----EFDHPKL 521
Query: 570 QIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVHPQHPLY 629
Q D GKRF W+ I E+ LL+ TK+L+ L+ E+ RN+ + +++
Sbjct: 522 QADTIGKRFLWK------CISEEELLQATKELDKELSMHEMRRNTPRQEKIFLQRNSNAQ 575
Query: 630 QQITLYCQL-YHQLPPQDRFAWEIDVNASGGMNGYIWLCERNGLRSIIPSPVKGLPDIER 688
+ QL P+ + + ++ GG WL SP++ L DI
Sbjct: 576 ALAKVIVQLQTSSCSPEQKLPIDSAISGLGG-----WLSPDGLSNGFFCSPLQNLQDITN 630
Query: 689 NQAM 692
+QA+
Sbjct: 631 DQAI 634
>gi|355563402|gb|EHH19964.1| 5'-3' exoribonuclease 2 [Macaca mulatta]
Length = 926
Score = 499 bits (1286), Expect = e-138, Method: Compositional matrix adjust.
Identities = 307/763 (40%), Positives = 417/763 (54%), Gaps = 107/763 (14%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPAF+RWL+ +YP IV+ VEE P+ + GV PVD SKPNPN +EFDNLYLDMNGII
Sbjct: 1 MGVPAFFRWLSRKYPSIIVNCVEEKPK-ECNGVKIPVDASKPNPNDVEFDNLYLDMNGII 59
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ KPAP + D++ +IF+YID +F +VRPR+LLY+AIDGVAPRAKMNQQR+RRF
Sbjct: 60 HPCTHPEDKPAPKNEDEMMVAIFEYIDRLFSIVRPRRLLYMAIDGVAPRAKMNQQRSRRF 119
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQ 180
RA+K+ EA E++R+R+E G L +E E DSN ITPGT+FM L+ L+Y+I
Sbjct: 120 RASKEGMEAAVEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIA 179
Query: 181 ARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
RLN PGW+ N+ + H DPNT HCL G DADLIML
Sbjct: 180 DRLNNDPGWK---------NLTAQPNH---------------DPNTHHCLCGADADLIML 215
Query: 241 SLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDT-PIHK 299
LATHE +F+I+RE P + + C +C Q GH +C G P + + + D+ P +
Sbjct: 216 GLATHEPNFTIIREEFK-PNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADSLPCAE 274
Query: 300 KKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREG 359
++ FL + VLREYL+ EL + + PF + ER +DD+VF+CFFVGNDFLPH+P+LEIRE
Sbjct: 275 GEFIFLRLNVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREN 334
Query: 360 AINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYEYNE 419
AI+ L+++Y+ GGYLT++G V L RV+ + +V ED IF+KR + ++ +
Sbjct: 335 AIDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSFRRRQ 394
Query: 420 AM---------------------KLNARRESSEELLQAPVAVADTVKLGEPGYKERYYAD 458
L +R ++ P A +++
Sbjct: 395 KEKRKRMKRDQPAFTPSGILTPHALGSRNSPGSQVASNPRQAAYEMRMQNNSSPSISPNT 454
Query: 459 KFEI-SNPEEIDKVKK------------DVVLKYVEGLCWVCRYY--------------- 490
F +P I +K+ D V + G W RYY
Sbjct: 455 SFTSDGSPSPIGGIKRKAEDSDSEPEPEDNVRLWEAG--WKQRYYKNKFDVDAADEKFRR 512
Query: 491 -----YQDVCSWQWFYPYH-------YAPF-----ASDLKDLSDLEITFFLG-EPFRPFD 532
Y + W Y Y Y PF ASD + ++D+ F G +PF+P +
Sbjct: 513 KVVQSYVEGLCWVLRYYYQGCASWKWYYPFHYAPFASDFEGIADMPSDFEKGTKPFKPLE 572
Query: 533 QLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEK 592
QLMG PAAS + LP +R LM+DP S I FYP DF ID+NGK++AWQGV LPF+DE+
Sbjct: 573 QLMGVFPAASGNFLPPSWRKLMSDPDSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDER 632
Query: 593 LLLRQTKKLEVFLTEEELFRNSVMLDLLYVHPQHPLYQQITLYCQLYHQLPPQDRFAWEI 652
L +++ LT EE RNS+ D+L+V HPL+ I Q P +
Sbjct: 633 RLRAALEEVYPDLTPEETRRNSLGGDVLFVGKHHPLHDFILELYQTGSTEP--------V 684
Query: 653 DV--NASGGMNGYIWLCERNGL-RSIIPSPVKGLPDIERNQAM 692
DV G+ G L E L I+ SPV L D+ +N +
Sbjct: 685 DVPPELCHGIQGKFSLDEEAILPDQIVCSPVPMLRDLTQNTVV 727
>gi|167383239|ref|XP_001736453.1| 5'-3' exoribonuclease [Entamoeba dispar SAW760]
gi|165901153|gb|EDR27303.1| 5'-3' exoribonuclease, putative [Entamoeba dispar SAW760]
Length = 858
Score = 498 bits (1283), Expect = e-138, Method: Compositional matrix adjust.
Identities = 282/662 (42%), Positives = 389/662 (58%), Gaps = 79/662 (11%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP+F+RWL R+P I D + G D+++PN NG+E+DN Y+DMNG+I
Sbjct: 1 MGVPSFFRWLKQRFPKIIDDCQPSSQEKYG-------DLNEPNTNGVEYDNFYIDMNGLI 53
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP + A S +D+ + Y+D++ +VRPRKLLYLA+DGVAPRAKMNQQR+RRF
Sbjct: 54 HPCLHPQDRQAAESVEDMMVLLTRYLDYLIDIVRPRKLLYLAVDGVAPRAKMNQQRSRRF 113
Query: 121 RAAKDAAEAE---AEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQY 177
++AKDA AE AEE R R A L DSN ITPGT+FM+V+S L+
Sbjct: 114 KSAKDAENAELKQAEENRNR-----AKNGLPEIPYVRPFDSNCITPGTEFMSVVSKTLKK 168
Query: 178 FIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADL 237
+I+ R++Q W VILSD+ VPGEGEHKIM +IR Q+ P ++PN HC+YGLDADL
Sbjct: 169 YIKERMSQSSYWNKLVVILSDSGVPGEGEHKIMDFIRRQKESPDYNPNIHHCMYGLDADL 228
Query: 238 IMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAEC-HGKPGDNPADWNGVDDTP 296
IMLSLATHE FSI+RE + +Q++C++C ++ H +C H K G DT
Sbjct: 229 IMLSLATHERFFSIVREKVFF--EQDQCYICNKI-HPPDKCPHRKEV-------GALDTI 278
Query: 297 IHKKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEI 356
I K +QFL+ +LR YLQ L + FER VDDF+F CF VGNDFLP +P+L+I
Sbjct: 279 I--KPFQFLHCHILRGYLQITLKVEG----FEFERCVDDFIFFCFLVGNDFLPRIPSLDI 332
Query: 357 REGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQK---RTRIQQ 413
R+G ++LLM VY REF GGY+T++G + + + F++ V E I +K + ++
Sbjct: 333 RDGGVDLLMKVY-REFLPHGGYITESGSLNVTNAKNFLREVGKEEPAILEKKYQKEKMNA 391
Query: 414 AYEYNEAMKLNARRESS------------------EELLQAPVAVA-------------- 441
++ MK R++S E+ Q + A
Sbjct: 392 KKNFDNQMKQLESRKASIYENSTLKSTESINSLTPEQQEQLKIQEAEIKSIEQRENRLKE 451
Query: 442 --------DTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQD 493
D +K+GE GY +RYY KF+I+ ++ KV +D+V Y EG+ WV YYY+
Sbjct: 452 RFKKAEEKDLLKMGESGYTQRYYNVKFKINPKKDTQKV-RDIVHSYFEGMNWVLGYYYKG 510
Query: 494 VCSWQWFYPYHYAPFASDLKDLSDLEITFFLGE--PFRPFDQLMGTLPAASSSALPEKYR 551
SW W+YPY YAPFA D+ + D F + PFRPF+QLM LP S S LPE++
Sbjct: 511 CQSWDWYYPYLYAPFAEDMGEYVDYNFEFKYKKSIPFRPFEQLMSVLPPRSKSCLPEQFH 570
Query: 552 NLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELF 611
+LM SPI +FYP F++D NG++ ++ +V L FID++ LL K +E L +
Sbjct: 571 DLMKSKGSPISEFYPDTFKLDFNGEKVDYKAIVVLTFIDQEKLLHYVKPIEKKLKGDAKR 630
Query: 612 RN 613
RN
Sbjct: 631 RN 632
>gi|118355816|ref|XP_001011167.1| XRN2 [Tetrahymena thermophila]
gi|89292934|gb|EAR90922.1| XRN 5'-3' exonuclease N-terminus family protein [Tetrahymena
thermophila SB210]
Length = 1065
Score = 495 bits (1274), Expect = e-137, Method: Compositional matrix adjust.
Identities = 280/683 (40%), Positives = 393/683 (57%), Gaps = 85/683 (12%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPAF+RWL R P I+D E + D E N E DNLYLDMNGII
Sbjct: 1 MGVPAFFRWLCARNPQFILDAHENYEEFDAES------------NNPEIDNLYLDMNGII 48
Query: 61 HPCFHPDGKPAPTSY--DDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
HPC DG P ++ D+F +IF Y+D + L RP+K+LY+AIDGVAPRAKMNQQR R
Sbjct: 49 HPCCRSDGSVVPIAHTIQDMFNNIFLYVDKLMDLCRPKKILYMAIDGVAPRAKMNQQRAR 108
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKL----LSAKEKPETCDSNVITPGTQFMAVLSAA 174
RF+ AK+A E + ++E L EF E ++ L+ + D+NVITPGT FM LS A
Sbjct: 109 RFKGAKEAVELQQKKEELLNEFRERSEINDDVLAFVQN--RFDTNVITPGTAFMRDLSMA 166
Query: 175 LQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLD 234
LQ+++ R+N+ P ++ KVI SDA++PGEGEHKI+ +IR+QR+ +DPNT+HCLYG D
Sbjct: 167 LQHYVIERMNKHPLFKDIKVIFSDASIPGEGEHKILDFIRVQRDQQNYDPNTKHCLYGAD 226
Query: 235 ADLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHG----KPGDNPADWN 290
ADLIML L+THE +F I+RE I + ++++C +C Q GH +C + G P
Sbjct: 227 ADLIMLGLSTHEPYFYIIREQI-ITQEEKRCSICQQTGHFQMDCPNEMAVEAGQKPISQK 285
Query: 291 --GVDDTPIHK---KKYQFLNIWVLREYLQYELDIP--------NPPFPINFERIVDDFV 337
+ + K + +QF ++V+R+YL + ERI+DDFV
Sbjct: 286 ILQAQEQKVRKGITQSFQFAKLYVMRQYLNMRFSKVLFNDNLECKLKMQYDIERIIDDFV 345
Query: 338 FLCFFVGNDFLPHMPTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSV 397
F+CFFVGNDFLPH+P L IR+G I+ L+ +Y T + YLT GE+ L +V K ++++
Sbjct: 346 FMCFFVGNDFLPHIPNLSIRDGGIDALLTLYDHTITQVDDYLTCNGELNLKQVAKLLENM 405
Query: 398 AVYEDQIF------------------QKRTRIQQAYEYNEAMKLNARRE----------- 428
A+ E+ + +K R+Q+ + + +R+
Sbjct: 406 AIVEEDLMKFRKDKEDRDKKNQEINKEKEARLQELRPHISEEEYQKKRKEWRLKDEKKVE 465
Query: 429 --SSEELLQAPVAV-------ADTVKLGEP--------GYKERYYADKFEISNPEEIDKV 471
++E LLQ + A T+K + YK YY DKF + PE+ ++
Sbjct: 466 IINNESLLQRFKRILSERSNEAKTIKEVKESTQITLNYNYKLSYYNDKFGVK-PEDFIQM 524
Query: 472 KKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDLEITFFLGEPFRPF 531
+ + YVE LCW YYY+ SW W+YP+HY+PFASDL D+ I F GEPF+PF
Sbjct: 525 QWLIKQSYVEALCWNFAYYYKGCISWSWYYPFHYSPFASDLIDIDQHIIEFERGEPFKPF 584
Query: 532 DQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDE 591
QL+ P AS+ ++PE +R LM +P+S I FYP DF +D+ GK+F W G V LPFI+E
Sbjct: 585 YQLLSVFPPASALSVPECFRPLMIEPTSEIADFYPIDFYVDLIGKKFEWLGEVILPFIEE 644
Query: 592 KLLLRQTKKLEVFLTEEELFRNS 614
+ LLR +K E L+ EE RN+
Sbjct: 645 ERLLRAARKYEHLLSPEEKQRNT 667
>gi|156084528|ref|XP_001609747.1| XRN 5'-3' exonuclease protein [Babesia bovis T2Bo]
gi|154796999|gb|EDO06179.1| XRN 5'-3' exonuclease protein, putative [Babesia bovis]
Length = 988
Score = 494 bits (1273), Expect = e-137, Method: Compositional matrix adjust.
Identities = 287/686 (41%), Positives = 393/686 (57%), Gaps = 72/686 (10%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQ-------VDGEGVARPVDVSKPNPNGMEFDNLY 53
MGVP FYRWL RYP + D ++ + ++ G+A + PNPNG EFDNLY
Sbjct: 1 MGVPTFYRWLCSRYPRVVHDAKDDSNENNFDFSDLESYGLA----LLSPNPNG-EFDNLY 55
Query: 54 LDMNGIIHPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMN 113
+DMNG+IHPC HP+G P S + +F+ IFDY+D + ++RPRK+L+LAIDGVAPRAKMN
Sbjct: 56 IDMNGLIHPCCHPEGLEQPPSEEVMFQCIFDYLDRLMYIIRPRKILFLAIDGVAPRAKMN 115
Query: 114 QQRTRRFRAAKDAAEAEAEEE---RLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAV 170
QQR+RRF K AAEA+ E E ++ EF + + KE DSNVITPGT FM
Sbjct: 116 QQRSRRF---KSAAEADLEAEIYSKVAAEFAQRNVRIPPKE--SRWDSNVITPGTPFMHE 170
Query: 171 LSAALQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCL 230
LS + +I+ R + W VI SDAN PGEGEHKIM++IR QR+ +DPNT+H L
Sbjct: 171 LSKRVVAYIKERRDMYEAWSRIHVIYSDANSPGEGEHKIMNFIRNQRHSDQYDPNTKHVL 230
Query: 231 YGLDADLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWN 290
+G+DADLIML LATHE++F I+RE+++ +K + A+ + +
Sbjct: 231 HGMDADLIMLGLATHEVNFYIIREIVSNLNPTKKAEDEIRKSIAVAQTSRPQLKDIKSYR 290
Query: 291 GVDDTPIHKKKYQFLNIWVLREYLQYELDIP-----NPPFPINFERIVDDFVFLCFFVGN 345
+ + K QFL + VLREYL ++L P PI+FER +DD V +CFF GN
Sbjct: 291 SM--LRQNWKPLQFLRLPVLREYLSHQLYFPRGWSRGNSGPIDFERCIDDLVLMCFFCGN 348
Query: 346 DFLPHMPTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIF 405
DFLPH+P++ I+ G+I+ ++ +Y+ +G YLT+ GE+ ++ F+ +A EDQ+F
Sbjct: 349 DFLPHLPSISIQGGSIDQMILLYQSLLPDLGDYLTNEGEINFPQLGAFVSYIANVEDQVF 408
Query: 406 ---------QKRTRIQQAYEYNEAMKLNAR-----------------------------R 427
QK R+Q + + E +R +
Sbjct: 409 KAEQEFKQRQKMRRLQHSGDNTENKDQVSRPTDFDNAGGETVLKNQDSSTLNNGLEIEFK 468
Query: 428 ESSEELLQAPVAVADTVK-----LGEP-GYKERYYADKFEISNPEEIDKVKKDVVLKYVE 481
+ ELL+ V D V+ L +P +KE YY KF + +++ + V Y++
Sbjct: 469 KRCAELLKQEREVDDPVEPIDLSLNDPVRWKETYYRKKFGLCESQDVWEFASQVANHYIK 528
Query: 482 GLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAA 541
G+CWV RYYYQ SW W+YP+HYAPF SDL + LE TF G+PF PF QLM +P
Sbjct: 529 GMCWVLRYYYQGCTSWGWYYPFHYAPFCSDL-NFEGLEFTFDYGKPFTPFQQLMSVMPIR 587
Query: 542 SSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKL 601
SS LPE+ R+LMTD SPI FYP F D NGKR+ +Q V LPFIDEK LL +
Sbjct: 588 SSHCLPEQLRHLMTDTDSPIADFYPIKFDEDPNGKRYKYQWVALLPFIDEKKLLNLVIPI 647
Query: 602 EVFLTEEELFRNSVMLDLLYVHPQHP 627
E L +E RNS D+L+ +P P
Sbjct: 648 EAILPKELQDRNSEKKDMLFANPAGP 673
>gi|413918977|gb|AFW58909.1| hypothetical protein ZEAMMB73_438738 [Zea mays]
Length = 795
Score = 494 bits (1273), Expect = e-137, Method: Compositional matrix adjust.
Identities = 289/719 (40%), Positives = 409/719 (56%), Gaps = 112/719 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MG+P+FY+W+ +YP SI+ V+++P+ P+G+ +DNLYLDMN II
Sbjct: 1 MGIPSFYKWVVSKYP-SIISPVKDEPE--------------ECPDGIIYDNLYLDMNCII 45
Query: 61 HPCFHP---------DGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAK 111
H CFHP D +P PT+ ++VF+S+F+Y+D +F +VRP LLYLA+DGVAP AK
Sbjct: 46 HCCFHPQDQLTHADIDVRP-PTTANEVFESMFEYMDRLFRIVRPTSLLYLAVDGVAPFAK 104
Query: 112 MNQQRTRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVL 171
MN+ R RF +A ERL +E +E E D NVI+PGT+FM +
Sbjct: 105 MNRIRRGRFHSAM---------ERLAEE--------PPREISEVSDPNVISPGTEFMEKV 147
Query: 172 SAALQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLY 231
S AL+Y+I+AR N P W+ VILSDA+VPGEGEHKIMS+IR Q ++ G+DPNTRHCL+
Sbjct: 148 SEALEYYIRARFNSDPWWRDIMVILSDASVPGEGEHKIMSFIRAQCSMEGYDPNTRHCLF 207
Query: 232 GLDADLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNG 291
G DADLIML+LA+HE++FSILRE + Q+E G P
Sbjct: 208 GHDADLIMLALASHEVYFSILREDVLYQNQEE--------------TEGNP--------- 244
Query: 292 VDDTPIHKKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHM 351
KK + FLN+WVLREYL+ E I +P + ER++DDF+F+CF +GNDF+PH+
Sbjct: 245 -------KKSFLFLNMWVLREYLEIEFKILDPVCETDIERLIDDFIFICFLMGNDFIPHI 297
Query: 352 PTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVL--------LDRVEKFIQSVAVYEDQ 403
P+L+ +EGA++LL+ VY+ F MGGY+T+ +V + R+E F +++YED+
Sbjct: 298 PSLKTQEGAVDLLIEVYKTTFNKMGGYITNTDKVKDKYGAYLEVSRLETFFHELSMYEDK 357
Query: 404 IFQKRTRIQQAY---EYNEAMKLNARRESSE------ELLQAPVAVADTVKLGEPGYKER 454
IF KR ++Q Y+E ++ E E +LL D+++LG PG+K R
Sbjct: 358 IFLKRYDLKQDSLLETYHEMLREAPESERPELRQKLDDLLFNEENPYDSIRLGLPGWKSR 417
Query: 455 YYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKD 514
++ + F EI K++ D+ KY+EGLCWV + Y+ DV SW W+YP++ APF SDLK
Sbjct: 418 FFREHFGAKTSSEIGKLQNDMAQKYLEGLCWVLQCYFADVPSWSWYYPFYVAPFVSDLKG 477
Query: 515 LSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMN 574
LS +EI+F + +P RPFDQLM LP S ALP+ Y P FY P +
Sbjct: 478 LSRIEISFTVDKPLRPFDQLMAVLPMQSWGALPKCYEKKRDTP------FYYPRLVHAKD 531
Query: 575 GKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVHPQHPLYQQITL 634
GK F W+G I E+L L ++ ++ LT E RN+ + +++H
Sbjct: 532 GKYFLWRG------ISEELRLSASEMVDRKLTTLESRRNTTRKEKVFLHRSSNSVPHNGG 585
Query: 635 YCQLYHQLPPQDRFAWEIDVNASGGMNGYIWLCERNGL-RSIIPSPVKGLPDIERNQAM 692
L H E+ AS G+ G+I +G PSP L DI +Q +
Sbjct: 586 SSSLPHN---------EVTEQAS-GIGGWIAPAYNDGFCDGFFPSPTPNLQDITSDQTI 634
>gi|440792890|gb|ELR14098.1| zinc knuckle domain containing protein [Acanthamoeba castellanii
str. Neff]
Length = 862
Score = 489 bits (1258), Expect = e-135, Method: Compositional matrix adjust.
Identities = 286/695 (41%), Positives = 389/695 (55%), Gaps = 85/695 (12%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSK---PNPNGMEFDNLYLDMN 57
MGVP+F+RWL RYP + D VEE+ D D++K PNPNGMEFD+L+LDMN
Sbjct: 1 MGVPSFFRWLMKRYPHVVTDCVEEEHSGDD-------DINKKLGPNPNGMEFDSLFLDMN 53
Query: 58 GIIHPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRT 117
GIIH HP+ PAP S + + + +F +I+ + +VRPRKLLY+ IDGVAPRAKMNQQR+
Sbjct: 54 GIIHRATHPEDGPAPESEEAMMEVMFAFIERLVNIVRPRKLLYIGIDGVAPRAKMNQQRS 113
Query: 118 RRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQY 177
RRF AAK E EE + + E + GK KP D NVITPGT+FMA + AL+
Sbjct: 114 RRFLAAKHRLE---EEAKAKAEPADGGK---QPAKP-IFDHNVITPGTEFMARAAEALRA 166
Query: 178 FIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADL 237
+++ P W VILSD+ VPGEGEHKIM +IR QR G++PN +YGLDADL
Sbjct: 167 HFARKISADPNWSPLAVILSDSCVPGEGEHKIMEFIRHQRIQEGYNPNAHMAVYGLDADL 226
Query: 238 IMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPI 297
I L+LA HE FSILRE ++ CFVC +VGH++ +C P +P + DD
Sbjct: 227 IFLTLAQHEPRFSILREEVS----SVTCFVCHKVGHISTDC---PQLHPEEHKHDDDDEE 279
Query: 298 HKK-----KYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMP 352
+ + ++Q+++ VLREYL E + FP + ER++DDF+ +CF GNDFLP +P
Sbjct: 280 NDEQPPELRFQWVHTQVLREYLDREFRHLSLSFPYSLERVIDDFIVICFLAGNDFLPRLP 339
Query: 353 TLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRT--- 409
++ I EGAI+ L+ Y+ + GY+ G + R+E + VA E+ + ++R
Sbjct: 340 SVAIHEGAIDTLIGAYKHHLPQLDGYICTNGNIDFRRLEHVVAMVAASEEAVLKERKKNF 399
Query: 410 RIQQAYEYNEAMKLNAR---------------------RESSEELLQAPVAVADTVKLGE 448
R +Q E +L R +E+ +L++ + E
Sbjct: 400 RRRQLQEKALLRELAQRDDDDGDDGDDDDDGGHRRGKGKEAGHKLVRYKRKEGKRSREDE 459
Query: 449 PG-----------------------YKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCW 485
G +++RY KF + P + + VV YVEGL W
Sbjct: 460 AGEIEKECLDEDEEEEDLVRIGERGWRDRYVMQKFGV--PSANREFYQGVVRAYVEGLQW 517
Query: 486 VCRYYYQDVCSWQWFYPYHYAPFASDLKDL-----SDLEITFFLGEPFRPFDQLMGTLPA 540
V RYY+Q SW+WFYPYHY P A+ L+D+ +++ +F L EPF PF QLM LPA
Sbjct: 518 VARYYWQGCVSWKWFYPYHYPPMATMLEDIGRFRSAEVVASFQLAEPFHPFAQLMAVLPA 577
Query: 541 ASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNG--KRFAWQGVVKLPFIDEKLLLRQT 598
AS+ ALP + LMT SPI +YP +IDM+G W GVVKLPF+DE LL
Sbjct: 578 ASAHALPPPCQALMTSAQSPIADYYPTKIEIDMDGVSHNLEWAGVVKLPFVDENRLLAVI 637
Query: 599 KKLEVFLTEEELFRNSVMLDLLYVHPQHPLYQQIT 633
K LE LT EE+ RNS L L + P PL+ +T
Sbjct: 638 KPLESQLTAEEVHRNSFGLPRLLIGPASPLHHALT 672
>gi|296084855|emb|CBI28264.3| unnamed protein product [Vitis vinifera]
Length = 525
Score = 486 bits (1251), Expect = e-134, Method: Compositional matrix adjust.
Identities = 267/576 (46%), Positives = 351/576 (60%), Gaps = 87/576 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP+FYRWL ++YP +V VE++ + S NPNG+EFDNLYLDMNGII
Sbjct: 1 MGVPSFYRWLVNKYPEIVVRAVEDERES-----------SSANPNGIEFDNLYLDMNGII 49
Query: 61 HPCFHPDGKP-APTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRR 119
HPCFHP+ + PT++++VF ++++YID IF +VRPRKLLY+AIDGVAPRAKMNQQR RR
Sbjct: 50 HPCFHPEDQIFPPTTFEEVFNNMYEYIDRIFSIVRPRKLLYMAIDGVAPRAKMNQQRRRR 109
Query: 120 FRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFI 179
F+ AKD AEAEE+RLR++FE GK L K++ + D N+ITPGT FM +S ALQ +I
Sbjct: 110 FQTAKDNEIAEAEEQRLRRQFEMEGKPLVPKQESQVSDPNIITPGTVFMHEVSKALQQYI 169
Query: 180 QARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIM 239
+R+ GW+ KVILSD+NVPGEGEHKIMS+IRLQR+LP ++PNT HCLYGLDADLIM
Sbjct: 170 CSRMKHEAGWKDLKVILSDSNVPGEGEHKIMSFIRLQRSLPDYNPNTLHCLYGLDADLIM 229
Query: 240 LSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPAD------W---- 289
L+LATHE+HFSILRE + Q+ C A E P + W
Sbjct: 230 LALATHEVHFSILREDVLTLEQRGSC-------ESAVETKTSPPKANSSLVKSRGWFKQV 282
Query: 290 ----------NGVDDTPIHKKKYQFLNIWVLREYLQYELDIPNPP---FPINFERIVDDF 336
++ K YQFL++W+LREYL+ ++ I +PP INFERI
Sbjct: 283 LTVDKTNSFIKNLESKSSIKMPYQFLHVWILREYLELDMKISDPPEKLKEINFERIR--- 339
Query: 337 VFLCFFVGNDFLPHMPTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQS 396
+ C+ V M +E ++G+ V L RVEKFI
Sbjct: 340 CYECYMVD------MERIEEKKGSF-----------------------VKLKRVEKFILL 370
Query: 397 VAVYEDQIFQKRTRIQQA-----------YEYNEAMKLNARRESSEELLQAPVAVADTVK 445
V YE++IF+KR ++ + E + +K N R +S +L ++ D V+
Sbjct: 371 VGTYEEKIFKKRMALRDSKLRWLLSTFYTKEMKKRLKENIRAKS--DLWRSGSLGIDRVR 428
Query: 446 LGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHY 505
LG PG+KERYY +K + I+ +K++V KY EGL WV +YY+ V SW WFYPYHY
Sbjct: 429 LGHPGWKERYYKEKCSCDTSQGIESTRKELVQKYTEGLLWVLQYYFSGVPSWTWFYPYHY 488
Query: 506 APFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAA 541
PFASD K LS ++ F G PF+PFDQLMG LP +
Sbjct: 489 GPFASDFKGLSRVKGKFERGSPFKPFDQLMGVLPPS 524
>gi|145505349|ref|XP_001438641.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124405813|emb|CAK71244.1| unnamed protein product [Paramecium tetraurelia]
Length = 773
Score = 484 bits (1246), Expect = e-134, Method: Compositional matrix adjust.
Identities = 263/666 (39%), Positives = 387/666 (58%), Gaps = 58/666 (8%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPAF+RWL R P ++++V+E D ++ N + DNLYLDMNGII
Sbjct: 1 MGVPAFFRWLCARNPKALLEVLENS---DESSLS----------NNPDIDNLYLDMNGII 47
Query: 61 HPCFHPD--GKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
HPC HPD G P P +YDD+F ++F YID + +VRP++L+Y+AIDGVAPRAK+NQQR+R
Sbjct: 48 HPCSHPDQGGIPIPVTYDDMFVNVFHYIDRLVDIVRPKELIYMAIDGVAPRAKLNQQRSR 107
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEK--PETCDSNVITPGTQFMAVLSAALQ 176
RFRAA+++ + E+ERLR + G A + DSN ITPGT+FM L+ ALQ
Sbjct: 108 RFRAAQESIRIQKEKERLRDYWRTQGLNSDALNTYIEKNFDSNQITPGTEFMQKLNIALQ 167
Query: 177 YFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDAD 236
Y+I R+N P ++ +I +D+++PGEGEHKI+ ++R QR + RHCLYG DAD
Sbjct: 168 YYIYDRMNNNPLFRNVLIIFNDSSIPGEGEHKILQFVRDQRRQMNY-KTVRHCLYGADAD 226
Query: 237 LIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTP 296
LIML L+THE +F ++RE I + ++C +C Q GH +C + +
Sbjct: 227 LIMLGLSTHEPYFYVIRETI-MANDDKQCSICQQKGHFFTDCKKREKQYNQIQQQQKNKL 285
Query: 297 IHKKKYQFLNIWVLREYLQYELDIPNPPFP--INFERIVDDFVFLCFFVGNDFLPHMPTL 354
I + +Q L + ++RE+L +E + ERI+DDFVF+CF VGNDFLPH+P L
Sbjct: 286 I-QVDFQILQLNIVREFLYFETRDLQASLKGQYDLERIIDDFVFMCFLVGNDFLPHIPCL 344
Query: 355 EIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQ----KRTR 410
+I EG I+ L+ +Y+ + +G YLT+ GE+ L ++ +F+ V + ED++ + K+
Sbjct: 345 KITEGGIDCLLIIYKTILSQIGDYLTNCGELNLQQMNQFLFHVGLIEDELIKGQEKKKEI 404
Query: 411 IQQAYEYNEAMK-----------------------LNARRESSEELLQAPVAVADTVKLG 447
++ E N MK +A ++ E+ Q + A + K
Sbjct: 405 VKNRRERNAEMKEQKVLMAPEFSIVDTQKEILSKFKSALKDKLTEINQQEIDQAQSAKSS 464
Query: 448 EP-------GYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWF 500
+ YK+RYY +KF I P + ++ + + + Y+E L W +YYYQ W WF
Sbjct: 465 QELKKWKAVSYKQRYYQEKFGIK-PAQFNEFQHRIKISYLEALAWTLKYYYQGCVDWGWF 523
Query: 501 YPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSP 560
YPYHYAPFA DL +L F L PF+P+ QL+ LP S+ LP Y+ LM + SSP
Sbjct: 524 YPYHYAPFAQDLTNLDQCLFEFSLNTPFKPYQQLLAVLPPQSAQFLPRPYQQLMLETSSP 583
Query: 561 IYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLL 620
I FYP DF +D+ GK+FAW G V LPF+D L++ + + V L++ E R+ + L+
Sbjct: 584 IADFYPTDFVVDLKGKKFAWLGEVVLPFVDADRLIKAS-NIGVSLSKLEQERDRLGQTLI 642
Query: 621 YVHPQH 626
+ +H
Sbjct: 643 FSLKKH 648
>gi|338719278|ref|XP_003363975.1| PREDICTED: 5'-3' exoribonuclease 2 isoform 2 [Equus caballus]
gi|338719280|ref|XP_003363976.1| PREDICTED: 5'-3' exoribonuclease 2 isoform 3 [Equus caballus]
Length = 896
Score = 482 bits (1241), Expect = e-133, Method: Compositional matrix adjust.
Identities = 275/646 (42%), Positives = 371/646 (57%), Gaps = 71/646 (10%)
Query: 56 MNGIIHPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQ 115
MNGIIHPC HP+ KPAP + D++ +IF+YID +F +VRPR+LLY+AIDGVAPRAKMNQQ
Sbjct: 1 MNGIIHPCTHPEDKPAPKNEDEMMVAIFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQ 60
Query: 116 RTRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAAL 175
R+RRFRA+K+ EA E++R+R+E G L +E E DSN ITPGT+FM L+ L
Sbjct: 61 RSRRFRASKEGMEAAVEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCL 120
Query: 176 QYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDA 235
+Y+I RLN PGW+ VILSDA+ PGEGEHKIM YIR QR P DPNT HCL G DA
Sbjct: 121 RYYIADRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADA 180
Query: 236 DLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDT 295
DLIML LATHE +F+I+RE P + + C +C Q GH +C G P + + + D+
Sbjct: 181 DLIMLGLATHEPNFTIIREEFK-PNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADS 239
Query: 296 -PIHKKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTL 354
P + ++ FL + VLREYL+ EL + + PF + ER +DD+VF+CFFVGNDFLPH+P+L
Sbjct: 240 LPCAEGEFIFLRLNVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSL 299
Query: 355 EIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQA 414
EIREGAI+ L+++Y+ GGYLT++G V L RV+ + +V ED IF+KR + +
Sbjct: 300 EIREGAIDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDS 359
Query: 415 YEYNEAM---------------------KLNARRESSEELLQAPVAVADTVKLGEPGYKE 453
+ + L +R ++ P A +++
Sbjct: 360 FRRRQKEKRKRMKRDQPAFTPGGILTPHALGSRNSPGSQVASNPRQAAYEMRMQNNSSPS 419
Query: 454 RYYADKFEI-SNPEEIDKVKK------------DVVLKYVEGLCWVCRYY---------- 490
F +P I +K+ D V + G W RYY
Sbjct: 420 VSPNASFTSDGSPSPIGGIKRKAEDSDSEPEPEDNVRLWEAG--WKQRYYKNKFDVDAAD 477
Query: 491 ----------YQDVCSWQWFYPYH-------YAPF-----ASDLKDLSDLEITFFLG-EP 527
Y + W Y Y Y PF ASD + ++D+ F G +P
Sbjct: 478 EKFRRKVVQSYVEGLCWVLRYYYQGCASWKWYYPFHYAPFASDFEGIADMPSDFEKGTKP 537
Query: 528 FRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLP 587
F+P +QLMG PAAS + LP +R LM+DP S I FYP DF ID+NGK++AWQGV LP
Sbjct: 538 FKPLEQLMGVFPAASGNFLPPSWRKLMSDPDSSIIDFYPEDFAIDLNGKKYAWQGVALLP 597
Query: 588 FIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVHPQHPLYQQIT 633
F+DE+ L +++ LT EE RNS+ D+L+V HPL+ I
Sbjct: 598 FVDERRLRAALEEVYPDLTPEETRRNSLGGDVLFVGKHHPLHDFIV 643
>gi|194380934|dbj|BAG64035.1| unnamed protein product [Homo sapiens]
Length = 896
Score = 482 bits (1241), Expect = e-133, Method: Compositional matrix adjust.
Identities = 288/706 (40%), Positives = 391/706 (55%), Gaps = 78/706 (11%)
Query: 56 MNGIIHPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQ 115
MNGIIHPC HP+ KPAP + D++ +IF+YID +F +VRPR+LLY+AIDGVAPRAKMNQQ
Sbjct: 1 MNGIIHPCTHPEDKPAPKNEDEMMVAIFEYIDRLFSIVRPRRLLYMAIDGVAPRAKMNQQ 60
Query: 116 RTRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAAL 175
R+RRFRA+K+ EA E++R+R+E G L +E E DSN ITPGT+FM L+ L
Sbjct: 61 RSRRFRASKEGMEAAVEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCL 120
Query: 176 QYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDA 235
+Y+I RLN PGW+ VILSDA+ PGEGEHKIM YIR QR P DPNT HCL G DA
Sbjct: 121 RYYIADRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADA 180
Query: 236 DLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDT 295
DLIML LATHE +F+I+RE P + + C +C Q GH +C G P + + + D+
Sbjct: 181 DLIMLGLATHEPNFTIIREEFK-PNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADS 239
Query: 296 -PIHKKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTL 354
P + ++ FL + VLREYL+ EL + + PF + ER +DD+VF+CFFVGNDFLPH+P+L
Sbjct: 240 LPCAEGEFIFLRLNVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSL 299
Query: 355 EIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQA 414
EIRE AI+ L+++Y+ GGYLT++G V L RV+ + +V ED IF+KR + +
Sbjct: 300 EIRENAIDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDS 359
Query: 415 YEYNEAM---------------------KLNARRESSEELLQAPVAVADTVKLGEPGYKE 453
+ + L +R ++ P A +++
Sbjct: 360 FRRRQKEKRKRMKRDQPAFTPSGILTPHALGSRNSPGSQVASNPRQAAYEMRMQNNSSPS 419
Query: 454 RYYADKFEI-SNPEEIDKVKK------------DVVLKYVEGLCWVCRYY---------- 490
F +P + +K+ D V + G W RYY
Sbjct: 420 ISPNTSFTSDGSPSPLGGIKRKAEDSDSEPEPEDNVRLWEAG--WKQRYYKNKFDVDAAD 477
Query: 491 ----------YQDVCSWQWFYPYH-------YAPF-----ASDLKDLSDLEITFFLG-EP 527
Y + W Y Y Y PF ASD + ++D+ F G +P
Sbjct: 478 EKFRRKVVQSYVEGLCWVLRYYYQGCASWKWYYPFHYAPFASDFEGIADMPSDFEKGTKP 537
Query: 528 FRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLP 587
F+P +QLMG PAAS + LP +R LM+DP S I FYP DF ID+NGK++AWQGV LP
Sbjct: 538 FKPLEQLMGVFPAASGNFLPPSWRKLMSDPDSSIIDFYPEDFAIDLNGKKYAWQGVALLP 597
Query: 588 FIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVHPQHPLYQQITLYCQLYHQLPPQDR 647
F+DE+ L +++ LT EE RNS+ D+L+V HPL+ I Q P
Sbjct: 598 FVDERRLRAALEEVYPDLTPEETRRNSLGGDVLFVGKHHPLHDFILELYQTGSTEP---- 653
Query: 648 FAWEIDVNASGGMNGYIWLCERNGL-RSIIPSPVKGLPDIERNQAM 692
E+ G+ G L E L I+ SPV L D+ +N +
Sbjct: 654 --VEVPPELCHGIQGKFSLDEEAILPDQIVCSPVPMLRDLTQNTVV 697
>gi|332238206|ref|XP_003268294.1| PREDICTED: 5'-3' exoribonuclease 2 isoform 2 [Nomascus leucogenys]
Length = 896
Score = 482 bits (1240), Expect = e-133, Method: Compositional matrix adjust.
Identities = 290/708 (40%), Positives = 392/708 (55%), Gaps = 82/708 (11%)
Query: 56 MNGIIHPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQ 115
MNGIIHPC HP+ KPAP + D++ +IF+YID +F +VRPR+LLY+AIDGVAPRAKMNQQ
Sbjct: 1 MNGIIHPCTHPEDKPAPKNEDEMMVAIFEYIDRLFSIVRPRRLLYMAIDGVAPRAKMNQQ 60
Query: 116 RTRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAAL 175
R+RRFRA+K+ EA E++R+R+E G L +E E DSN ITPGT+FM L+ L
Sbjct: 61 RSRRFRASKEGMEAAVEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCL 120
Query: 176 QYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDA 235
+Y+I RLN PGW+ VILSDA+ PGEGEHKIM YIR QR P DPNT HCL G DA
Sbjct: 121 RYYIADRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADA 180
Query: 236 DLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDT 295
DLIML LATHE +F+I+RE P + + C +C Q GH +C G P + + + D+
Sbjct: 181 DLIMLGLATHEPNFTIIREEFK-PNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADS 239
Query: 296 -PIHKKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTL 354
P + ++ FL + VLREYL+ EL + + PF + ER +DD+VF+CFFVGNDFLPH+P+L
Sbjct: 240 LPCAEGEFIFLRLNVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSL 299
Query: 355 EIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQA 414
EIRE AI+ L+++Y+ GGYLT++G V L RV+ + +V ED IF+KR + +
Sbjct: 300 EIRENAIDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDS 359
Query: 415 YEYNEAM---------------------KLNARRESSEELLQAPVAVADTVKLGEPGYKE 453
+ + L +R ++ P A +++
Sbjct: 360 FRRRQKEKRKRMKRDQPAFTPSGILTPHALGSRNSPGSQVASNPRQAAYEMRMQNNSSPS 419
Query: 454 RYYADKFEI-SNPEEIDKVKK------------DVVLKYVEGLCWVCRYY---------- 490
F +P I +K+ D V + G W RYY
Sbjct: 420 ISPNTSFTSDGSPSPIGGIKRKAEDSDSEPEPEDNVRLWEAG--WKQRYYKNKFDVDAAD 477
Query: 491 ----------YQDVCSWQWFYPYH-------YAPF-----ASDLKDLSDLEITFFLG-EP 527
Y + W Y Y Y PF ASD + ++D+ F G +P
Sbjct: 478 EKFRRKVVQSYVEGLCWVLRYYYQGCASWKWYYPFHYAPFASDFEGIADMPSDFEKGTKP 537
Query: 528 FRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLP 587
F+P +QLMG PAAS + LP +R LM+DP S I FYP DF ID+NGK++AWQGV LP
Sbjct: 538 FKPLEQLMGVFPAASGNFLPPSWRKLMSDPDSSIIDFYPEDFAIDLNGKKYAWQGVALLP 597
Query: 588 FIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVHPQHPLYQQITLYCQLYHQLPPQDR 647
F+DE+ L +++ LT EE RNS+ D+L+V HPL+ I Q P
Sbjct: 598 FVDERRLRAALEEVYPDLTPEETRRNSLGGDVLFVGKHHPLHDFILELYQTGSTEP---- 653
Query: 648 FAWEIDV--NASGGMNGYIWLCERNGL-RSIIPSPVKGLPDIERNQAM 692
+DV G+ G L E L I+ SPV L D+ +N +
Sbjct: 654 ----VDVPPELCHGIQGRFSLDEEAILPDQIVCSPVPMLRDLTQNTVV 697
>gi|390354472|ref|XP_786402.3| PREDICTED: 5'-3' exoribonuclease 2-like [Strongylocentrotus
purpuratus]
Length = 803
Score = 480 bits (1235), Expect = e-132, Method: Compositional matrix adjust.
Identities = 286/673 (42%), Positives = 385/673 (57%), Gaps = 77/673 (11%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQ-VDGEGVARPVDVSKPNPNGMEFDNLYLDMNGI 59
MGVP + WL + P IVD EE + VDG+ + PV+ ++ NPNG+EFDNLYLDMN I
Sbjct: 42 MGVPGLFMWLRKKCPSMIVDCEEEKAKHVDGKRI--PVNTTQRNPNGVEFDNLYLDMNEI 99
Query: 60 IHPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRR 119
I PC +P KPAP + D++ IF ID + +VRPRKLLY+A DGVAPRAKM + R+ R
Sbjct: 100 IVPCCYPSNKPAPQNDDEIMCEIFLNIDRLVSIVRPRKLLYIAFDGVAPRAKMKKMRSSR 159
Query: 120 FRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFI 179
F +K E +++ R E E++G+ L K K ET PG FM + +Y++
Sbjct: 160 FIGSKIRRENREAQDKKRSEIEDSGRHLPPKRK-ET------YPGKGFMFRQAEYFRYYV 212
Query: 180 QARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIM 239
RLN PGWQ KVILSDAN PGEGEHKIM YIR QR P ++P+T HC++G D
Sbjct: 213 TERLNNDPGWQGIKVILSDANTPGEGEHKIMDYIRKQRANPDYNPSTHHCVHGAD----- 267
Query: 240 LSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIHK 299
SLATHE++F+I+RE P Q+ C +C Q H +C G D P +
Sbjct: 268 -SLATHEMNFTIIREQFK-PNQRRACELCYQEDHEMTDCQGL------------DAPPEE 313
Query: 300 KKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREG 359
++ EYL EL + F N ER++DD+VFLCFFVGNDFLPH+P+L IREG
Sbjct: 314 RE---------NEYLVNEL-LEGIHFHCNHERVIDDWVFLCFFVGNDFLPHLPSLNIREG 363
Query: 360 AINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQK---------RTR 410
AI++L+ +YR+ YLT+ G V L V++ + + ED+ F+K T+
Sbjct: 364 AIDILIRLYRKALHNTKDYLTENGVVNLKLVQQLMTDLGKEEDETFKKWRVDELKNEETK 423
Query: 411 IQQA-------YEYNEAMKL--------NARRESSEELLQAPV-AVADTVKLGEPGYKER 454
I A + N+ + L +AR S + + P A DTV+L E G+K+R
Sbjct: 424 IMPANPADAEEVDTNDTVSLLLVDHQHGDARMPSRDNANKNPADAEEDTVRLWEEGWKKR 483
Query: 455 YYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPF-----A 509
YY K ++++ + + V +Y+EGLCW+ RYYYQ SW+W++PYHYAPF A
Sbjct: 484 YYQHKLKVASSDH--DFRAQFVRRYIEGLCWLFRYYYQGCASWKWYFPYHYAPFASDFLA 541
Query: 510 SDLKDLSDLEITFFLG-EPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPD 568
SD D+ DL I F G +P +P +Q M + + LPE + MTD SPI FYP D
Sbjct: 542 SDFPDIDDLSINFEKGTKPLKPLEQQM--IVGFNRRYLPETWSRKMTDDDSPIIDFYPED 599
Query: 569 FQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVHPQHPL 628
F ID+NG ++ QGV LPF+DE LLR + LT EE RNS + L+V H L
Sbjct: 600 FHIDLNGNKYPSQGVALLPFVDEDRLLRCLADVYPDLTPEEKKRNSNGPERLFVDKHHRL 659
Query: 629 YQQITLYCQLYHQ 641
Y I QLY +
Sbjct: 660 YNFIK---QLYKK 669
>gi|71028722|ref|XP_764004.1| exoribonuclease [Theileria parva strain Muguga]
gi|68350958|gb|EAN31721.1| exoribonuclease, putative [Theileria parva]
Length = 958
Score = 479 bits (1232), Expect = e-132, Method: Compositional matrix adjust.
Identities = 292/707 (41%), Positives = 391/707 (55%), Gaps = 90/707 (12%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEE--DPQVD-GEGVARPVDVSKPNPNGMEFDNLYLDMN 57
MGVP FYRWL +RYP DV++ D +D + A +++ K NPNG EFDNLYLDMN
Sbjct: 1 MGVPTFYRWLCNRYPRVPKDVIDNYNDRNLDLSDPDAIGLELLKDNPNG-EFDNLYLDMN 59
Query: 58 GIIHPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAI-----------DGV 106
GIIHPC HP+ P S + +F I DY+D IF +VRPRKL+YLAI DGV
Sbjct: 60 GIIHPCCHPENMEQPQSEEVMFTCILDYLDRIFFMVRPRKLIYLAIGNIKNYIMICIDGV 119
Query: 107 APRAKMNQQRTRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQ 166
APRAK+NQQR+RRF++A A + + L +++E+ + DSNVITPGT+
Sbjct: 120 APRAKINQQRSRRFKSAALADLEDETYDTLIRDYEKRYGKTDLIVRKSKWDSNVITPGTE 179
Query: 167 FMAVLSAALQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNT 226
FM LS L +I+ R + W+ VI SD+NVPGEGEHKIM +IR QR+ P +DPNT
Sbjct: 180 FMYKLSEKLMEYIEDRAERYDAWKRIVVIFSDSNVPGEGEHKIMKFIRNQRHCPDYDPNT 239
Query: 227 RHCLYGLDADLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNP 286
RH L+G+DADLIML LATHE +F ILRE++T + + KP N
Sbjct: 240 RHVLHGMDADLIMLGLATHEPNFFILREIVTFFTNPTTNNTENAIAN-TLNIVSKPFKNT 298
Query: 287 ADWNGVDD----TPIHKKKYQFLNIWVLREYLQYELDIP----NPPFPINFERIVDDFVF 338
GV + K QFL + VLREYL ++L P N ++FER VDD V
Sbjct: 299 ESAEGVQKYLKMMRENWKPLQFLQLPVLREYLSHQLRFPLGFENGEM-VDFERCVDDLVL 357
Query: 339 LCFFVGNDFLPHMPTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVA 398
+ FF GNDFLP++P++ I G+I+ ++ +Y++ A+ YL+D G++ + F + ++
Sbjct: 358 MIFFCGNDFLPNLPSISITGGSIDQMLLLYQKVLPALNDYLSDEGKLNFHAITSFFELLS 417
Query: 399 VYEDQIFQK----RTRIQQAYEYNEAMKLNARRESS------------EELLQ------- 435
ED+ F+ + + Q + NE +A +S+ EE ++
Sbjct: 418 KIEDETFKNIHEFKMKAQSRKQNNELNSADATNDSNGHSEGTGSDKSEEERIEDRFKKEL 477
Query: 436 ----APVAVADTVKL------GEPG-YKERYYADKFEIS--NPEEIDKVKKDVVLKYVEG 482
V D VKL +P +KE YY +KF + N EEIDK + + Y++G
Sbjct: 478 KERINSCNVKDDVKLPVDVTLNDPKLWKEAYYREKFNLGDKNQEEIDKFVQKLSFDYIKG 537
Query: 483 LCWVCRYYYQDVCSWQWFYPYHYAPFASDL--KDLSDLE--------------------- 519
+CWV +YYYQ SW W+Y YHY+PF SDL L LE
Sbjct: 538 ICWVLQYYYQGCPSWSWYYRYHYSPFCSDLHFSGLQSLEDYKSESQSEGEANLKRRHDSL 597
Query: 520 ------ITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDM 573
I F LG P PF QLMG +P SS LPEK R LMTDP SP+ +FYP F+ D
Sbjct: 598 EMGVKMIKFDLGVPLTPFQQLMGVMPIRSSHCLPEKLRTLMTDPDSPLREFYPTKFREDP 657
Query: 574 NGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLL 620
NGKR+ +Q V LPFIDEK LL K +E L+EEE RN +L+
Sbjct: 658 NGKRYKYQWVALLPFIDEKKLLTHVKPIEDELSEEEKIRNRTSNNLI 704
>gi|395851967|ref|XP_003798518.1| PREDICTED: 5'-3' exoribonuclease 2 isoform 2 [Otolemur garnettii]
Length = 908
Score = 473 bits (1216), Expect = e-130, Method: Compositional matrix adjust.
Identities = 296/764 (38%), Positives = 406/764 (53%), Gaps = 127/764 (16%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPAF+RWL+ +YP IV+ VEE
Sbjct: 1 MGVPAFFRWLSRKYPSIIVNCVEE------------------------------------ 24
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
K +P + D++ +IF+YID +F +VRPR+LLY+AIDGVAPRAKMNQQR+RRF
Sbjct: 25 --------KTSPKNEDEMMVAIFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRF 76
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQ 180
RA+K+ EA E++R+R+E G L +E E DSN ITPGT+FM L+ L+Y+I
Sbjct: 77 RASKEGMEAALEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIA 136
Query: 181 ARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
RLN PGW+ VILSDA+VPGEGEHKIM YIR QR P DPNT HCL G DADLIML
Sbjct: 137 DRLNNDPGWENLTVILSDASVPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIML 196
Query: 241 SLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDT-PIHK 299
LATHE +F+I+RE P + + C +C Q GH +C G P + + + D+ P +
Sbjct: 197 GLATHEPNFTIIREEFK-PNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADSLPCAE 255
Query: 300 KKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREG 359
++ FL + VLREYL+ EL + + PF + ER +DD+VF+CFFVGNDFLPH+P+LEIREG
Sbjct: 256 GEFIFLRLNVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREG 315
Query: 360 AINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYEYNE 419
AI+ L+++Y+ GGYLT++G V L RV+ + +V ED IF+KR + ++ +
Sbjct: 316 AIDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSFRRRQ 375
Query: 420 AM---------------------KLNARRESSEELLQAPVAVADTVKLGEPGYKERYYAD 458
L++R ++ P A +++ +
Sbjct: 376 KEKRKRMKRDQPAFTPSGILTPHALSSRNSPGSQVASNPRHAAYEMRMQNNNCSPSISPN 435
Query: 459 KFEISN--PEEIDKVKK------------DVVLKYVEGLCWVCRYY-------------- 490
S+ P + +K+ D V + G W RYY
Sbjct: 436 TSFTSDGSPSPVGGIKRKAEDSDSEPEPEDNVRLWEAG--WKQRYYKNKFDVDAADEKFR 493
Query: 491 ------YQDVCSWQWFYPYH-------YAPF-----ASDLKDLSDLEITFFLG-EPFRPF 531
Y + W Y Y Y PF ASD + ++D+ F G +PF+P
Sbjct: 494 RKVVQSYVEGLCWVLRYYYQGCASWKWYYPFHYAPFASDFEGIADMPSDFEKGTKPFKPL 553
Query: 532 DQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDE 591
+QLMG PAAS + LP +R LM+DP S I FYP DF ID+NGK++AWQGV LPF+DE
Sbjct: 554 EQLMGVFPAASGNFLPPSWRKLMSDPDSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDE 613
Query: 592 KLLLRQTKKLEVFLTEEELFRNSVMLDLLYVHPQHPLYQQITLYCQLYHQLPPQDRFAWE 651
+ L +++ LT EE RNS+ D+L+V +HPL+ I Q P
Sbjct: 614 RRLRAALEEVYPDLTPEETKRNSLGSDVLFVGKRHPLHDFIVELYQTGSTEP-------- 665
Query: 652 IDV--NASGGMNGYIWLCERNGL-RSIIPSPVKGLPDIERNQAM 692
+DV G+ G L E L I+ SPV L D+ +N A+
Sbjct: 666 VDVPPELCHGIQGKFSLDEEAILPDQIVCSPVPMLRDLTQNTAV 709
>gi|218190750|gb|EEC73177.1| hypothetical protein OsI_07223 [Oryza sativa Indica Group]
Length = 790
Score = 472 bits (1215), Expect = e-130, Method: Compositional matrix adjust.
Identities = 291/714 (40%), Positives = 397/714 (55%), Gaps = 134/714 (18%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MG+P+FYRWL +RYP + P S+P + +DNLYLDMN II
Sbjct: 1 MGIPSFYRWLVNRYP----------------SIVSPAKESRPADGIVVYDNLYLDMNQII 44
Query: 61 HPCFHPDGK-------PAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMN 113
H FHP + APT+ +VF+S+FDY+D +F +VRPR+LLYLA+DGVAP AKMN
Sbjct: 45 HYSFHPQDQMNAGTDVCAPTTVSEVFESMFDYLDRLFRIVRPRRLLYLAVDGVAPCAKMN 104
Query: 114 -QQRTRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLS 172
+R RRF A +EEE ++K E D NVITPGT+FM +S
Sbjct: 105 GMRRGRRFAWA-------SEEEEMQKISEGVS------------DPNVITPGTEFMEKIS 145
Query: 173 AALQYFIQARLNQI-PGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLY 231
AL Y+I+ARLN PGW+ VILSDANVPGEGEHKIMS+IR QR++ G+DPNTRHCL+
Sbjct: 146 QALTYYIRARLNSSDPGWKHIMVILSDANVPGEGEHKIMSFIRAQRSMEGYDPNTRHCLF 205
Query: 232 GLDADLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNG 291
G DADLIML+LA+HE+HFSILRE DN
Sbjct: 206 GHDADLIMLALASHEVHFSILRE-----------------------------DNS---QL 233
Query: 292 VDDTPIHKKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHM 351
+ P +K+Y FLNIWVLREYL+ EL I +P + ER++DDF+F+CF +GNDF+PH+
Sbjct: 234 TEADP--EKQYLFLNIWVLREYLEIELKILDPVCEPDIERLIDDFIFICFLMGNDFIPHI 291
Query: 352 PTLEIREGAINLLMHVYRREFTAMGGYLTD--------AGEVLLDRVEKFIQSVAVYEDQ 403
P+LE++E A++LL+ VY+ F MGGY+ + A + + R+E F +++YE++
Sbjct: 292 PSLEMKEYALDLLIEVYKTTFNKMGGYIVNIEKVKDKHAAYLEVSRLEIFFHQLSMYEEK 351
Query: 404 IFQKRTRIQQAYEYNEAMKLNAR---RESSE-ELLQAPVAVADTVKLGEPGYKERYYADK 459
IF KR ++Q E++K + R RE+SE E L+ + D +ER Y
Sbjct: 352 IFLKRYELEQ-----ESLKKSCRDVLREASESERLELSRKLEDLF-----FNEERPY--- 398
Query: 460 FEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDLE 519
D KY+EGLCW+ +YY DV SW W+YP++ APF SDLK E
Sbjct: 399 --------------DKAQKYLEGLCWMLQYYLADVPSWSWYYPFYVAPFVSDLKSHCRFE 444
Query: 520 ITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFA 579
I+F + +P RPFDQLM LP SS ALPE YR +M +F P Q D GKRF
Sbjct: 445 ISFTVDKPLRPFDQLMAVLPLRSSCALPECYRKVMGRK-----EFDHPKLQADTIGKRFL 499
Query: 580 WQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVHPQHPLYQQITLYCQL- 638
W+ I E+ LL+ TK+L+ L+ E+ RN+ + +++ + QL
Sbjct: 500 WK------CISEEELLQATKELDKELSMHEMRRNTPRQEKIFLQRNSNAQALAKVIVQLQ 553
Query: 639 YHQLPPQDRFAWEIDVNASGGMNGYIWLCERNGLRSIIPSPVKGLPDIERNQAM 692
P+ + + ++ GG WL SP++ L DI +QA+
Sbjct: 554 TSSCSPEQKLPIDSAISGLGG-----WLSPDGLSNGFFCSPLQNLQDITNDQAI 602
>gi|67466694|ref|XP_649490.1| 5'-3' exonuclease domain containing protein [Entamoeba histolytica
HM-1:IMSS]
gi|56465942|gb|EAL44104.1| 5'-3' exonuclease domain containing protein [Entamoeba histolytica
HM-1:IMSS]
Length = 779
Score = 471 bits (1211), Expect = e-130, Method: Compositional matrix adjust.
Identities = 273/663 (41%), Positives = 393/663 (59%), Gaps = 87/663 (13%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP+F+ WL +Y +SI + +++ ++ + D+ PNPNG+E+DN Y+D+NG+I
Sbjct: 1 MGVPSFFAWLTKKY-VSITNDCKKNSSIEND------DLLSPNPNGVEYDNFYIDLNGLI 53
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC+HP + P + DVF + YID++ +VRPRKLLY+AIDGVAPRAKMNQQR+RRF
Sbjct: 54 HPCYHPTDRQTPETNVDVFVLLTRYIDYMVDIVRPRKLLYIAIDGVAPRAKMNQQRSRRF 113
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQ 180
+ A++ + + FEE + KEKP DSN ITPGT+FM +S ++ +I+
Sbjct: 114 KTAQNM---------VNQSFEEKKSVF--KEKP--IDSNCITPGTEFMEAVSKVIKAYIK 160
Query: 181 ARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
R+N W VI SD++VPGEGEHKI+ +IR Q++ ++P RHC+YGLDADLIML
Sbjct: 161 ERMNSSKYWNSIIVIFSDSSVPGEGEHKIIDFIRRQKDCKNYNPYIRHCMYGLDADLIML 220
Query: 241 SLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIHKK 300
+LATHE +FSI+R+ G +KC++CG+ H + C P D PI K
Sbjct: 221 ALATHERYFSIIRDKPYNKG--DKCYICGEY-HSSDSCKNYNRVAPLD-------PI-TK 269
Query: 301 KYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGA 360
+ F++ VLR+YL + + +FER +DDF+F CF VGNDFLPH+P+L+I+EGA
Sbjct: 270 PFIFVDCHVLRQYLNNTIKVEK----YDFERCLDDFIFFCFLVGNDFLPHIPSLDIQEGA 325
Query: 361 INLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQI---------------F 405
I++L+ +Y + F GY+T+ G + V++F+ V E Q+ F
Sbjct: 326 IDILIKIYLK-FLPENGYITENGTINFKIVKRFLHLVGKEEKQLLVNRRLRKEKEDQLYF 384
Query: 406 QKRTR-----IQQAYEYNEAMKLNAR----------------------RESSEELLQAPV 438
K+ R IQ A+E N L R RES E+ Q V
Sbjct: 385 DKKMRELDYQIQSAFE-NRTEALPQRKTEIKVKSIKEVELAKEESQLIRESLEKKKQEVV 443
Query: 439 AVA-----DTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQD 493
D ++LGE GY+ERYY KF + +E + + ++V YVEGL WV YYY+
Sbjct: 444 RQMEELKHDEIQLGEQGYEERYYQQKFHVDYKKEKNNI-IEIVDSYVEGLNWVFSYYYEG 502
Query: 494 VCSWQWFYPYHYAPFASDLKDLSD--LEITFFLGEPFRPFDQLMGTLPAASSSALPEKYR 551
SW W+YPY+YAPFA D+ L D E+ + G+PFRPF+QLM LP S LP++++
Sbjct: 503 CQSWDWYYPYYYAPFAKDIGKLLDPEFEVQYTQGKPFRPFEQLMSVLPPQSKHCLPKEFQ 562
Query: 552 NLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELF 611
LM SSP+ FYP DF+IDMNG+R ++ + + FI++K LL + +E L +++
Sbjct: 563 QLMNSTSSPLSSFYPEDFKIDMNGERSFYKAIALIGFINQKKLLNVVEPIEKELGKKDQQ 622
Query: 612 RNS 614
RNS
Sbjct: 623 RNS 625
>gi|407036110|gb|EKE38009.1| 5'-3' exonuclease domain containing protein [Entamoeba nuttalli
P19]
Length = 779
Score = 470 bits (1210), Expect = e-129, Method: Compositional matrix adjust.
Identities = 274/663 (41%), Positives = 392/663 (59%), Gaps = 87/663 (13%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP+F+ WL +Y +SI + ++ ++ + D+S PNPNG+E+DN Y+D+NG+I
Sbjct: 1 MGVPSFFAWLTKKY-VSITNDCKKGSSIEND------DLSSPNPNGVEYDNFYIDLNGLI 53
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC+HP + P + DVF + YID++ +VRPRKLLY+AIDGVAPRAKMNQQR+RRF
Sbjct: 54 HPCYHPTDRQTPETNVDVFVLLTQYIDYMVDIVRPRKLLYIAIDGVAPRAKMNQQRSRRF 113
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQ 180
+ A+ + + FEE + KEKP DSN ITPGT+FM +S ++ +I+
Sbjct: 114 KTAQSM---------VNQSFEEKKSVF--KEKP--IDSNCITPGTEFMEAVSKVIKAYIK 160
Query: 181 ARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
R+N W VI SD++VPGEGEHKI+ +IR Q++ ++P RHC+YGLDADLIML
Sbjct: 161 ERMNSSKYWNSIIVIFSDSSVPGEGEHKIIDFIRRQKDCKNYNPYIRHCMYGLDADLIML 220
Query: 241 SLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIHKK 300
+LATHE +FSI+R+ G +KC++CG+ H + C P D PI K
Sbjct: 221 ALATHERYFSIIRDKPYNKG--DKCYICGEY-HSSDSCKNYNRVAPLD-------PI-TK 269
Query: 301 KYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGA 360
+ F++ VLR+YL + + +FER +DDF+F CF VGNDFLPH+P+L+I+EGA
Sbjct: 270 PFIFVDCHVLRQYLNNTIRVEK----YDFERCLDDFIFFCFLVGNDFLPHIPSLDIQEGA 325
Query: 361 INLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQI---------------F 405
I++L+ +Y + F GY+T+ G + V++F+ V E Q+ F
Sbjct: 326 IDILIKIYLK-FLPENGYITENGTINFKIVKRFLHLVGKEEKQLLVNRRLRKEKEDQLYF 384
Query: 406 QKRTR-----IQQAYEYNEAMKLNAR----------------------RESSEELLQAPV 438
K+ R IQ A+E N L R RES E+ Q V
Sbjct: 385 DKKMRELDYQIQSAFE-NRTEALPQRKTEIKVKSIKEVELAKEESQLIRESLEKKKQEVV 443
Query: 439 AVA-----DTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQD 493
D ++LGE GY+ERYY KF + +E + + ++V YVEGL WV YYY+
Sbjct: 444 RQMEELKHDEIQLGEQGYEERYYQQKFHVDYKKEKN-IIIEIVDSYVEGLNWVFSYYYEG 502
Query: 494 VCSWQWFYPYHYAPFASDLKDLSD--LEITFFLGEPFRPFDQLMGTLPAASSSALPEKYR 551
SW W+YPY+YAPFA D+ L D E+ + G+PFRPF+QLM LP S LP++++
Sbjct: 503 CQSWDWYYPYYYAPFAKDIGKLLDPEFEVQYTQGKPFRPFEQLMSVLPPQSKHCLPKEFQ 562
Query: 552 NLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELF 611
LM SSP+ FYP DF+IDMNG+R ++ + + FI++K LL + +E L +++
Sbjct: 563 QLMNSTSSPLSNFYPEDFKIDMNGERSFYKAIALIGFINQKELLNVVEPIEKELGKKDQQ 622
Query: 612 RNS 614
RNS
Sbjct: 623 RNS 625
>gi|449708316|gb|EMD47799.1| 5'3' exonuclease domain containing protein [Entamoeba histolytica
KU27]
Length = 779
Score = 469 bits (1207), Expect = e-129, Method: Compositional matrix adjust.
Identities = 273/663 (41%), Positives = 392/663 (59%), Gaps = 87/663 (13%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP+F+ WL +Y +SI + +++ ++ + D+ PNPNG+E+DN Y+D+NG+I
Sbjct: 1 MGVPSFFAWLTKKY-VSITNDCKKNSSIEND------DLLSPNPNGVEYDNFYIDLNGLI 53
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC+HP + P + DVF + YID++ +VRPRKLLY+AIDGVAPRAKMNQQR+RRF
Sbjct: 54 HPCYHPTDRQTPETNVDVFVLLTRYIDYMVDIVRPRKLLYIAIDGVAPRAKMNQQRSRRF 113
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQ 180
+ A++ + + FEE + KEKP DSN ITPGT+FM +S ++ +I+
Sbjct: 114 KTAQNM---------VNQSFEEKKSVF--KEKP--IDSNCITPGTEFMEAVSKVIKAYIK 160
Query: 181 ARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
R+N W VI SD++VPGEGEHKI+ +IR Q++ ++P RHC+YGLDADLIML
Sbjct: 161 ERMNSSKYWNSIIVIFSDSSVPGEGEHKIIDFIRRQKDCKNYNPYIRHCMYGLDADLIML 220
Query: 241 SLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIHKK 300
+LATHE +FSI+R+ G +KC++CG+ H + C P D PI K
Sbjct: 221 ALATHERYFSIIRDKPYNKG--DKCYICGEY-HSSDSCKNYNRVAPLD-------PI-TK 269
Query: 301 KYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGA 360
+ F++ VLR+YL + + +FER +DDF+F CF VGNDFLPH+P+L+I+EGA
Sbjct: 270 PFIFVDCHVLRQYLNNTIKVEK----YDFERCLDDFIFFCFLVGNDFLPHIPSLDIQEGA 325
Query: 361 INLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQI---------------F 405
I++L+ +Y + F GY+T+ G + V++F+ V E Q+ F
Sbjct: 326 IDILIKIYLK-FLPENGYITENGTINFKIVKRFLHLVGKEEKQLLVNRRLRKEKEDQLYF 384
Query: 406 QKRTR-----IQQAYEYNEAMKLNAR----------------------RESSEELLQAPV 438
K+ R IQ A+E N L R RES E+ Q V
Sbjct: 385 DKKMRELDYQIQSAFE-NRTEALPQRKTEIKVKSIKEVELAKEESQLIRESLEKKKQEVV 443
Query: 439 AVA-----DTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQD 493
D ++LGE GY+ERYY KF + +E + + ++V YVEGL WV YYY+
Sbjct: 444 RQMEELKHDEIQLGEQGYEERYYQQKFHVDYKKEKNNI-IEIVDSYVEGLNWVFSYYYEG 502
Query: 494 VCSWQWFYPYHYAPFASDLKDLSD--LEITFFLGEPFRPFDQLMGTLPAASSSALPEKYR 551
SW W+YPY+YAPFA D+ L D E+ G+PFRPF+QLM LP S LP++++
Sbjct: 503 CQSWDWYYPYYYAPFAKDIGKLLDPEFEVQHTQGKPFRPFEQLMSVLPPQSKHCLPKEFQ 562
Query: 552 NLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELF 611
LM SSP+ FYP DF+IDMNG+R ++ + + FI++K LL + +E L +++
Sbjct: 563 QLMNSTSSPLSSFYPEDFKIDMNGERSFYKAIALIGFINQKKLLNVVEPIEKELGKKDQQ 622
Query: 612 RNS 614
RNS
Sbjct: 623 RNS 625
>gi|84996629|ref|XP_953036.1| exoribonuclease (XRN family member) [Theileria annulata strain
Ankara]
gi|65304032|emb|CAI76411.1| exoribonuclease (XRN family member), putative [Theileria annulata]
Length = 937
Score = 468 bits (1205), Expect = e-129, Method: Compositional matrix adjust.
Identities = 281/715 (39%), Positives = 394/715 (55%), Gaps = 103/715 (14%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVD---GEGVARPVDVSKPNPNGMEFDNLYLDMN 57
MGVP FYRWL +RYP DV++ + + + A +++ K NPNG EFDNLYLDMN
Sbjct: 1 MGVPTFYRWLCNRYPRVPKDVIDNYNERNLDLSDEDAIGLELLKDNPNG-EFDNLYLDMN 59
Query: 58 GIIHPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAI-----------DGV 106
GIIHPC HP+ P + + +F I DY+D IF +VRPRKL+YLAI DGV
Sbjct: 60 GIIHPCCHPENMEQPQTEELMFNCILDYLDRIFFMVRPRKLIYLAIGNVNHDIIIFIDGV 119
Query: 107 APRAKMNQQRTRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQ 166
APRAK+NQQR+RRF++A A + + L K++E+ + + DSNVITPGT+
Sbjct: 120 APRAKINQQRSRRFKSAALADLEDETYDTLIKDYEKRYGKTNLIVRKSKWDSNVITPGTE 179
Query: 167 FMAVLSAALQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNT 226
FM LS L +I+ R+ + W+ VI SD+NVPGEGEHKIM +IR QR+ P +DPNT
Sbjct: 180 FMYKLSEKLIEYIEDRIEKYDAWKIIVVIFSDSNVPGEGEHKIMKFIRNQRHCPDYDPNT 239
Query: 227 RHCLYGLDADLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNP 286
RH L+G+DADLIML LATHE +F ILRE++T F + + + D
Sbjct: 240 RHVLHGMDADLIMLGLATHEPNFFILREIVT--------FFSNPTTNNSEKAIANTIDTV 291
Query: 287 ADWNGVDDTPIHKKKY-----------QFLNIWVLREYLQYELDIP----NPPFPINFER 331
+ + +KY QFL + VLREYL ++L P N ++FER
Sbjct: 292 SKTQNTTQSSGDVEKYMKMMRENWKPLQFLQLPVLREYLSHQLRFPLGFENGEM-VDFER 350
Query: 332 IVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVE 391
+DD V + FF GNDFLP++P++ I G+I+ ++ +Y++ + YL+D G + +
Sbjct: 351 CIDDLVLMIFFCGNDFLPNLPSISITGGSIDQMLLLYQKILPTLEDYLSDEGRLNFHTIT 410
Query: 392 KFIQSVAVYEDQIFQ-------KRTRIQQAYEYNEAM--------KLNARRESSEELLQ- 435
+F + ++ ED+ F+ K +Q + N + + N+ + EE ++
Sbjct: 411 QFFELLSKIEDETFKNIHEFKIKSQNRRQNDDSNSKVTNDSGGNSEANSSDKGGEERIED 470
Query: 436 ----------APVAVADTVK------LGEPG-YKERYYADKFEISN--PEEIDKVKKDVV 476
V D VK L +P +KE YY +KF + + PEEI+K + +
Sbjct: 471 KFMKELKEKMNSSNVKDDVKLPVDVTLNDPKLWKEAYYREKFNLGDKTPEEIEKFVQKLS 530
Query: 477 LKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLK-----------------DLSDLE 519
Y++G+CWV +YYYQ SW W+Y YHY+PF SDL D S+L+
Sbjct: 531 FDYIKGICWVLQYYYQGCPSWSWYYRYHYSPFCSDLNFSGIQSPEDYSCESVKDDESNLK 590
Query: 520 ------------ITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPP 567
I F L P PF QLMG +P SS +PEK R LMTD SP+ +FYP
Sbjct: 591 RRHNTLETGVKMIKFDLDVPLTPFQQLMGVMPIRSSHCIPEKLRTLMTDVDSPLREFYPT 650
Query: 568 DFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYV 622
F+ D NGKR+ +Q V LPFIDEK LL+ K +E L+EEE RN +L+ +
Sbjct: 651 KFREDPNGKRYKYQWVALLPFIDEKKLLKHVKPIEDELSEEEKVRNRTSNNLIKI 705
>gi|332021133|gb|EGI61520.1| 5'-3' exoribonuclease 2-like protein [Acromyrmex echinatior]
Length = 867
Score = 468 bits (1204), Expect = e-129, Method: Compositional matrix adjust.
Identities = 238/424 (56%), Positives = 305/424 (71%), Gaps = 9/424 (2%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPAF+RWL+ +YP IV+ +E+ V +GV PV+ ++PNPNG+EFDNLYLDMNGII
Sbjct: 1 MGVPAFFRWLSRKYPSVIVECIEQK-VVSADGVCIPVNSAEPNPNGVEFDNLYLDMNGII 59
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ KPAP D++ ++IF+ ID +F +VRPRKLLY+AIDGVAPRAKMNQQR+RRF
Sbjct: 60 HPCTHPEDKPAPKDEDEMMEAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLL-SAKEKPETCDSNVITPGTQFMAVLSAALQYFI 179
RAAK++ E E ER+R E G L K K E DSN ITPGT FMA LS+ L Y+I
Sbjct: 120 RAAKESTEKINEIERIRSELTLKGASLPPEKSKEEHFDSNCITPGTPFMARLSSCLHYYI 179
Query: 180 QARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIM 239
RLN PGW+ KVILSDANVPGEGEHKIM +IR QR P DPNT+H L G DADLIM
Sbjct: 180 HDRLNNDPGWRNIKVILSDANVPGEGEHKIMDFIRRQRAQPDHDPNTQHVLCGADADLIM 239
Query: 240 LSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHG-KPGDNPADWNGVDDTPIH 298
L LATHE +F+I+RE P + + C +CGQ+GH EC G +P P ++T
Sbjct: 240 LGLATHEPNFTIIREEFK-PNKPKPCDICGQLGHEMRECTGAEPNQKPE-----ENTYGS 293
Query: 299 KKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIRE 358
+ ++ F+ + VLREYL+ EL +PN PF +FER VDD+VF+CFFVGNDFLPH+P+LEIRE
Sbjct: 294 ECQFIFVRLNVLREYLERELHMPNLPFKYDFERAVDDWVFMCFFVGNDFLPHLPSLEIRE 353
Query: 359 GAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYEYN 418
GAI+ L+ +Y+R GG+LTD+G+V LDRV+ + + ED+IF+KR + + A++
Sbjct: 354 GAIDRLVALYKRAVYKTGGFLTDSGDVNLDRVQLIMSELGDAEDEIFKKRQQNELAFKQR 413
Query: 419 EAMK 422
E K
Sbjct: 414 EKDK 417
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 115/248 (46%), Positives = 152/248 (61%), Gaps = 17/248 (6%)
Query: 442 DTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFY 501
D V+L E G+K+RYY KF++S P+ + + +V L+YV GLCWV RYYYQ SW+W++
Sbjct: 514 DEVRLWEDGFKDRYYESKFDVS-PDNL-AFRNNVALQYVRGLCWVLRYYYQGCASWRWYF 571
Query: 502 PYHYAPFASDLKDLSDLEITFFLGE-PFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSP 560
PYHYAPFASD ++ L F G PFRP +QLMG PAAS +P+ + LMTDP S
Sbjct: 572 PYHYAPFASDFINIGGLSTEFEKGTVPFRPLEQLMGVFPAASRKHVPKPWAKLMTDPKSQ 631
Query: 561 IYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLL 620
I FYP DF+ID+NGK+FAWQGV LPF+DEK L + LTE E RN D L
Sbjct: 632 IIDFYPEDFKIDLNGKKFAWQGVALLPFVDEKRLFKALAPYYDSLTEAEKMRNVRGDDRL 691
Query: 621 YVHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVNAS-GGMNGYIWL---CERNGLRSII 676
YV ++ Y + LY ++R ++ +V S GM G ++L C +G +
Sbjct: 692 YVGIENSGYNFVK---GLY-----KNRIGFDKEVEISIDGMRGTVFLSEDCVSDG--GTL 741
Query: 677 PSPVKGLP 684
PSPV+GLP
Sbjct: 742 PSPVRGLP 749
>gi|440293117|gb|ELP86279.1| 5'->3' exoribonuclease, putative [Entamoeba invadens IP1]
Length = 881
Score = 468 bits (1203), Expect = e-129, Method: Compositional matrix adjust.
Identities = 276/641 (43%), Positives = 371/641 (57%), Gaps = 55/641 (8%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP+F+RWL +YP I+D + + D D+ PN NG E DN YLDMNG+I
Sbjct: 1 MGVPSFFRWLEKKYP-KIIDACQGSNKTDH------TDLDSPNLNGFEIDNFYLDMNGLI 53
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPCFHP +PAP + DD+ + Y+D+I +VRPRKL+Y+A+DGVAPRAKMNQQR RRF
Sbjct: 54 HPCFHPQDRPAPDTIDDMLIMLKRYLDYIIDIVRPRKLVYMAVDGVAPRAKMNQQRARRF 113
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQ 180
+AA+DA E +E+ + G A KP T DSN ITPGT FM ++ L+ +++
Sbjct: 114 KAARDAQSKEEYDEQKNITLIQQGHSPIAI-KP-TLDSNCITPGTVFMERVTETLKEYVK 171
Query: 181 ARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
R++ W+ VI+SDA+VPGEGEHKIM YIR Q++ P ++PN HC+YGLDADLIML
Sbjct: 172 ERISTSAYWKKLVVIISDASVPGEGEHKIMEYIRKQKDQPNYNPNIHHCIYGLDADLIML 231
Query: 241 SLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIHKK 300
+LATHE FSI+RE + + C++CGQ GH C K D PI +K
Sbjct: 232 TLATHERKFSIIREQVFF--EHVPCYICGQQGHAPDRCSHKGEIGAMD-------PI-RK 281
Query: 301 KYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGA 360
+ FL+ +LREYL + I +FERI+DDF+F CFFVGNDFLPH P+LEIREG+
Sbjct: 282 PFLFLHCHILREYLSKTIRIEG----FDFERIIDDFIFFCFFVGNDFLPHSPSLEIREGS 337
Query: 361 INLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYEYNEA 420
I++LM VY + F GYLTD+G + + F+ V E +I Q ++ + + N
Sbjct: 338 IDMLMEVYMK-FLPENGYLTDSGTLNATHAKNFMSLVGQREQRILQSKSEKESRFRINRK 396
Query: 421 MKL--------NARRESSEE------------------LLQAPVAVADTVKLGEPGYKER 454
K+ +A S E+ L ++ + GY+ +
Sbjct: 397 GKMIREFDDKISAVLGSGEDQAIKDLKLKHLKLDKENFLKGIEKEESEDINYSMNGYQAK 456
Query: 455 YYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKD 514
YYA K +I P E +V +Y GL WV +YYYQ W W++PY YAPF +D+
Sbjct: 457 YYASKLKIEYPSE---AMTQLVNEYFIGLSWVLKYYYQGCQCWDWYFPYLYAPFIADVAT 513
Query: 515 LSD--LEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQID 572
D LE F LG PF+P +QLM LP S +P +R++M +SPI +FYP F ID
Sbjct: 514 YLDNTLEPKFELGIPFKPVEQLMSVLPPRSKECVPMLFRDIMNSTTSPIKEFYPEKFAID 573
Query: 573 MNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRN 613
MNGK + V+ L FID+ LL K LE L +E RN
Sbjct: 574 MNGKTQEYLAVILLSFIDQNKLLEVLKPLEKQLQGQEFKRN 614
>gi|167539832|ref|XP_001741374.1| 5'-3' exoribonuclease [Entamoeba dispar SAW760]
gi|165894075|gb|EDR22159.1| 5'-3' exoribonuclease, putative [Entamoeba dispar SAW760]
Length = 779
Score = 468 bits (1203), Expect = e-129, Method: Compositional matrix adjust.
Identities = 267/662 (40%), Positives = 384/662 (58%), Gaps = 85/662 (12%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP+F+ WL +Y I + + ++ + D+S PNPNG+E+DN Y+D+NG+I
Sbjct: 1 MGVPSFFAWLTKKY-FGITNDCKRGSSIEND------DLSSPNPNGVEYDNFYIDLNGLI 53
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC+HP + P + DVF + YID++ +VRPRKLLY+AIDGVAPRAKMNQQR+RRF
Sbjct: 54 HPCYHPTDRQTPETNVDVFVLLTQYIDYMIDIVRPRKLLYIAIDGVAPRAKMNQQRSRRF 113
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQ 180
+ A + + FEE + KEKP DSN ITPGT+FM +S ++ +I+
Sbjct: 114 KTAYNMEN---------QSFEEKKSIF--KEKP--VDSNCITPGTEFMEAVSKVIKAYIK 160
Query: 181 ARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
R+N W VI SD++VPGEGEHKI+ +IR Q++ ++P RHC+YGLDADLIML
Sbjct: 161 ERMNSSKYWNSIIVIFSDSSVPGEGEHKIIDFIRRQKDCKNYNPYIRHCMYGLDADLIML 220
Query: 241 SLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIHKK 300
+LATHE +FSI+R+ G +KC++CG H C P D PI K
Sbjct: 221 ALATHERYFSIIRDKPYNKG--DKCYICGDY-HSPDHCKNYNRIAPLD-------PI-TK 269
Query: 301 KYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGA 360
+ F++ VLR+YL + + +FER +DDF+F CF VGNDFLP +P+L+I+EGA
Sbjct: 270 PFIFVDCHVLRQYLNKTIKVEK----YDFERCLDDFIFFCFLVGNDFLPRIPSLDIQEGA 325
Query: 361 INLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQI---------------F 405
I++L+ +Y + F GY+T+ G + + V+KF+ V E Q+ F
Sbjct: 326 IDILIKIYLK-FLPENGYITENGTINIKIVKKFLHLVGKEEKQLLVNRRLRKEKEDQIYF 384
Query: 406 QKRTR-------------------------------IQQAYEYNEAMKLNARRESSEELL 434
KR R +Q A E ++ +K + ++ E
Sbjct: 385 DKRMRELDYQIQSAFENRTEALPQRKTEIKVKSIKEVQLAKEESQLIKESLEKKKQELFH 444
Query: 435 QAPVAVADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDV 494
Q D ++LGEPGY+ERYY KF + +E V +++ YVEGL WV YYY+
Sbjct: 445 QIEELKNDEIQLGEPGYEERYYQQKFHVEYKKEKSLV-IEIIESYVEGLNWVFSYYYEGC 503
Query: 495 CSWQWFYPYHYAPFASDLKDLSD--LEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRN 552
SW W+YPY+YAPFA D+ L D E+ + G+PFRPF+QL+ LP S LP+++R
Sbjct: 504 QSWDWYYPYYYAPFAKDIGKLLDPEFEVQYTQGKPFRPFEQLLSVLPPQSKHCLPKEFRQ 563
Query: 553 LMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFR 612
LM SSP+ FYP +F+IDMNG+R ++ + + FI++K LL + +E L +++ R
Sbjct: 564 LMNSTSSPLSNFYPEEFKIDMNGERSFYKAIALIGFINQKKLLSVVEPIEKDLGKKDQQR 623
Query: 613 NS 614
NS
Sbjct: 624 NS 625
>gi|307183882|gb|EFN70493.1| 5'-3' exoribonuclease 2-like protein [Camponotus floridanus]
Length = 630
Score = 466 bits (1200), Expect = e-128, Method: Compositional matrix adjust.
Identities = 244/465 (52%), Positives = 316/465 (67%), Gaps = 18/465 (3%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPAF+RWL+ +YP IV+ +E+ + +GV PV+ + PNPNG+EFDNLYLDMNGII
Sbjct: 1 MGVPAFFRWLSRKYPSVIVECIEQK-TISADGVCIPVNSADPNPNGVEFDNLYLDMNGII 59
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ KPAP D++ ++IF+ ID +F +VRPRKLLY+AIDGVAPRAKMNQQR+RRF
Sbjct: 60 HPCTHPEDKPAPKDEDEMMEAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGK-LLSAKEKPETCDSNVITPGTQFMAVLSAALQYFI 179
RA+K+ E E +R+R E G L K K E DSN ITPGT FMA LSA L Y+I
Sbjct: 120 RASKETTEKINEIQRIRSELANKGAPLPPEKPKEEHFDSNCITPGTPFMARLSACLHYYI 179
Query: 180 QARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIM 239
RLN+ PGW+ KVILSDANVPGEGEHKIM +IR QR+ P DPNT+H L G DADLIM
Sbjct: 180 HERLNKDPGWRNIKVILSDANVPGEGEHKIMDFIRRQRSQPDHDPNTQHVLCGADADLIM 239
Query: 240 LSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIHK 299
L LATHE +F+I+RE P + + C +CGQ+GH EC G + + N +
Sbjct: 240 LGLATHEPNFTIIREEFK-PNKPKPCDICGQLGHEMRECTGAEPNQGQEENAFGS----E 294
Query: 300 KKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREG 359
+Y F+ + +LREYL+ EL +PN PF +FER VDD+VF+CFFVGNDFLPH+P+LEIREG
Sbjct: 295 CQYIFVRLNILREYLERELYMPNLPFKYDFERAVDDWVFMCFFVGNDFLPHLPSLEIREG 354
Query: 360 AINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYEYNE 419
AI+ L+ +Y++ GG+LTD+G+V LDRV+ + + ED+IF+KR + + A++ E
Sbjct: 355 AIDRLVALYKKAVYKTGGFLTDSGDVNLDRVQLIMSDLGDVEDEIFKKRQQNELAFKQRE 414
Query: 420 AMKLNARRESSEELLQ---------APVAVADTVKLGEPGYKERY 455
K RR+ + AP A+ TVK E E Y
Sbjct: 415 KDK--KRRQEIISNFKPKWIPAGQFAPTALGQTVKPIENARYEAY 457
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 60/117 (51%), Positives = 78/117 (66%), Gaps = 3/117 (2%)
Query: 442 DTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFY 501
D V+L E G+K+RYY KF++S P+ + + +V L+YV GLCWV RYYYQ SW+W++
Sbjct: 510 DEVRLWEDGFKDRYYESKFDVS-PDNL-AFRNNVALQYVRGLCWVLRYYYQGCASWRWYF 567
Query: 502 PYHYAPFASDLKDLSDLEITFFLGE-PFRPFDQLMGTLPAASSSALPEKYRNLMTDP 557
PYHYAPFASD ++ L F PFRP +QLMG PAAS +P + LMTDP
Sbjct: 568 PYHYAPFASDFINIGGLSTEFEKDTVPFRPLEQLMGVFPAASKKHVPAPWAKLMTDP 624
>gi|74227371|dbj|BAE21766.1| unnamed protein product [Mus musculus]
Length = 417
Score = 466 bits (1199), Expect = e-128, Method: Compositional matrix adjust.
Identities = 229/416 (55%), Positives = 298/416 (71%), Gaps = 3/416 (0%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPAF+RWL+ +YP IV+ VEE P+ + GV PVD SKPNPN +EFDNLYLDMNGII
Sbjct: 1 MGVPAFFRWLSRKYPSIIVNCVEEKPK-ECNGVKIPVDASKPNPNDVEFDNLYLDMNGII 59
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ KPAP + D++ +IF+YID +F +VRPR+LLY+AIDGVAPRAKMNQQR+RRF
Sbjct: 60 HPCTHPEDKPAPKNEDEMMVAIFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRF 119
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQ 180
RA+K+ EA E++R+R+E G L +E E DSN ITPGT+FM L+ L+Y+I
Sbjct: 120 RASKEGMEAAVEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIA 179
Query: 181 ARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
RLN PGW+ VILSDA+ PGEGEHKIM YIR QR P DPNT HCL G DADLIML
Sbjct: 180 DRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIML 239
Query: 241 SLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDT-PIHK 299
LATHE +F+I+RE P + + C +C Q GH +C G P + + + D+ P +
Sbjct: 240 GLATHEPNFTIIREEFK-PNKPKPCALCNQFGHEVKDCEGLPREKKGKHDELADSLPCAE 298
Query: 300 KKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREG 359
++ FL + VLREYL+ EL + + PFP + ER +DD+VF+CFFVGNDFLPH+P+LEIREG
Sbjct: 299 GEFIFLRLNVLREYLERELTMASLPFPFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREG 358
Query: 360 AINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAY 415
AI+ L+++Y+ GGYLT++G V L RV+ + +V ED IF+KR + ++
Sbjct: 359 AIDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSF 414
>gi|328788352|ref|XP_392371.3| PREDICTED: 5'-3' exoribonuclease 2 homolog [Apis mellifera]
Length = 948
Score = 466 bits (1199), Expect = e-128, Method: Compositional matrix adjust.
Identities = 233/423 (55%), Positives = 304/423 (71%), Gaps = 7/423 (1%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPAF+RWL+ +YP IV+ +E+ P + G+ PV+ ++PNPNG+EFDNLYLDMNGII
Sbjct: 1 MGVPAFFRWLSRKYPSVIVECIEQKP-ITTNGIRVPVNSAEPNPNGIEFDNLYLDMNGII 59
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ +PAP + D++ ++IF+ ID +F +VRPRKLLY+AIDGVAPRAKMNQQR+RRF
Sbjct: 60 HPCTHPEDRPAPQNEDEMMEAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLL-SAKEKPETCDSNVITPGTQFMAVLSAALQYFI 179
RA+K+A E E +R+R E G L K K E DSN ITPGT FMA LS L Y+I
Sbjct: 120 RASKEANEKINEIKRIRSELSLKGASLPPEKPKEEHFDSNCITPGTPFMARLSKCLHYYI 179
Query: 180 QARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIM 239
RLN PGW+ KVILSDANVPGEGEHKIM +IR QR P DPNT+H L G DADLIM
Sbjct: 180 HDRLNNDPGWRNIKVILSDANVPGEGEHKIMDFIRRQRAQPDHDPNTQHVLCGADADLIM 239
Query: 240 LSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIHK 299
L LATHE +F+I+RE P + + C +CGQ+GH EC G + + N +
Sbjct: 240 LGLATHEPNFTIIREEFK-PNKPKPCDICGQLGHEMQECTGAEPNQREEANPFGS----E 294
Query: 300 KKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREG 359
+Y F+ + VLREYL+ EL +PN PF +FER++DD+VF+CFFVGNDFLPH+P+LEIREG
Sbjct: 295 CQYIFVRLNVLREYLERELQMPNLPFKYDFERVIDDWVFMCFFVGNDFLPHLPSLEIREG 354
Query: 360 AINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYEYNE 419
AI+ L+++Y++ GG+LTD+G+V LDRV+ + + ED+IF+KR + + AY+ E
Sbjct: 355 AIDRLVNLYKKTVYKTGGFLTDSGDVNLDRVQLIMSELGDVEDEIFKKRQQNELAYKQRE 414
Query: 420 AMK 422
K
Sbjct: 415 KDK 417
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 114/253 (45%), Positives = 148/253 (58%), Gaps = 13/253 (5%)
Query: 442 DTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFY 501
D V+L E G+K+RYY KF++S P+ + + +V L+YV GLCWV RYYYQ SW+W++
Sbjct: 510 DEVRLWEDGFKDRYYESKFDVS-PDNL-VFRNNVALQYVRGLCWVLRYYYQGCASWKWYF 567
Query: 502 PYHYAPFASDLKDLSDLEITFFLGE-PFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSP 560
PYHYAPFASD ++ L F G PFRP +QLMG PAASS +P + LM+DP SP
Sbjct: 568 PYHYAPFASDFINIGGLSTEFEKGTIPFRPLEQLMGVFPAASSKHVPAPWAKLMSDPKSP 627
Query: 561 IYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLL 620
I FYP DF+ID+NGK+FAWQGV LPF+DEK L + + LTE E RN D L
Sbjct: 628 IIDFYPEDFKIDLNGKKFAWQGVALLPFVDEKRLFKALEPYYDCLTEAEKIRNVRGDDRL 687
Query: 621 YVHPQHPLYQQIT-LYCQLYHQLPPQDRFAWEIDVNASGGMNGYIWLCERN-GLRSIIPS 678
YV + Y + LY R E + GM G + L + G + +PS
Sbjct: 688 YVGLGNSGYNFMKGLYTN-------HVRSDAETSI-CIDGMRGTVLLTDDCVGDGATLPS 739
Query: 679 PVKGLPDIERNQA 691
P+ GL I N+
Sbjct: 740 PINGLLPIRNNKV 752
>gi|28503006|gb|AAH47182.1| 5'-3' exoribonuclease 2 [Danio rerio]
gi|182889854|gb|AAI65726.1| Xrn2 protein [Danio rerio]
Length = 540
Score = 466 bits (1198), Expect = e-128, Method: Compositional matrix adjust.
Identities = 228/416 (54%), Positives = 299/416 (71%), Gaps = 3/416 (0%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPAF+RWL+ +YP IV +EE + + GV PVD SKPNPN +EFDNLYLDMNGII
Sbjct: 1 MGVPAFFRWLSRKYPSIIVHCLEEKAK-EYNGVKIPVDTSKPNPNEVEFDNLYLDMNGII 59
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ KPAP + D++ +IF+YID +F +VRPR++LY+AIDGVAPRAKMNQQR+RRF
Sbjct: 60 HPCTHPEDKPAPKNEDEMMVAIFEYIDRLFNIVRPRRVLYMAIDGVAPRAKMNQQRSRRF 119
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQ 180
RA+K+ E E++++R+E E G L +E E DSN ITPGT+FM L+ L+Y++
Sbjct: 120 RASKEGVELAEEKQKMREEVIERGGYLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYVA 179
Query: 181 ARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
RL PGW+ V LSDA+VPGEGEHKIM YIR QR P DPNT HCL G DADLIML
Sbjct: 180 DRLTNDPGWRNITVFLSDASVPGEGEHKIMDYIRRQRGQPNHDPNTHHCLCGADADLIML 239
Query: 241 SLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDT-PIHK 299
LATHE +F+I+RE P + C +C Q+GH +C G P + + + DT P+ +
Sbjct: 240 GLATHEPNFTIIREEFK-PNKPRPCALCSQMGHEIKDCQGLPREKQGEHDEFADTIPVSE 298
Query: 300 KKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREG 359
+++ F+ + VLREYL+ EL + + PFP +FER VDD+VF+CFFVGNDFLPH+P+LEIREG
Sbjct: 299 QEFIFIRLAVLREYLERELTMASLPFPFSFERSVDDWVFMCFFVGNDFLPHLPSLEIREG 358
Query: 360 AINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAY 415
AI+ L+ +Y+ GGYLT+ G V L+RVE +Q+V V ED IF+KR +++
Sbjct: 359 AIDRLVGIYKDVVHKTGGYLTENGFVNLERVELIMQAVGVAEDNIFKKRKEDDESF 414
>gi|350410980|ref|XP_003489200.1| PREDICTED: 5'-3' exoribonuclease 2 homolog [Bombus impatiens]
Length = 947
Score = 465 bits (1196), Expect = e-128, Method: Compositional matrix adjust.
Identities = 235/425 (55%), Positives = 306/425 (72%), Gaps = 11/425 (2%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPAF+RWL+ +YP IV+ +E+ P + GV PV+ + PNPNG+EFDNLYLDMNGII
Sbjct: 1 MGVPAFFRWLSRKYPSIIVECIEQKP-ITTNGVRVPVNSADPNPNGIEFDNLYLDMNGII 59
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ KPAP + +++ ++IF+ ID +F +VRPRKLLY+AIDGVAPRAKMNQQR+RRF
Sbjct: 60 HPCTHPEDKPAPKNEEEMMEAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLL-SAKEKPETCDSNVITPGTQFMAVLSAALQYFI 179
RA+K+A+E E +R+R E G L K K + DSN ITPGT FMA LS L Y+I
Sbjct: 120 RASKEASEKVNEIKRIRSELTLKGASLPPEKPKEDHFDSNCITPGTPFMARLSQCLHYYI 179
Query: 180 QARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIM 239
RLN PGW+ KVILSDANVPGEGEHKIM +IR QR P DPNT+H L G DADLIM
Sbjct: 180 HDRLNNDPGWRNIKVILSDANVPGEGEHKIMDFIRKQRAQPDHDPNTQHVLCGADADLIM 239
Query: 240 LSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIHK 299
L LATHE +F+I+RE P + + C +CGQ+GH EC G A+ N D+T
Sbjct: 240 LGLATHEPNFTIIREEFK-PNKPKPCDICGQLGHEMQECTG------AEVNQGDETNTFG 292
Query: 300 K--KYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIR 357
+Y F+ + VLREYL+ EL +PN PF +FER++DD+VF+CFFVGNDFLPH+P+LEIR
Sbjct: 293 SECQYIFVRLNVLREYLERELQMPNLPFKYDFERVIDDWVFMCFFVGNDFLPHLPSLEIR 352
Query: 358 EGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYEY 417
EGAI+ L+++Y++ GG+LTD+G+V LDRV+ + + ED+IF+KR + + A++
Sbjct: 353 EGAIDRLVNLYKKAVYKTGGFLTDSGDVNLDRVQLIMSELGDVEDEIFKKRQQNELAFKQ 412
Query: 418 NEAMK 422
E K
Sbjct: 413 REKDK 417
Score = 202 bits (513), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 117/270 (43%), Positives = 154/270 (57%), Gaps = 13/270 (4%)
Query: 418 NEAMKLNARRESSEELLQAPVAVADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVL 477
N ++ R+ S E V D V+L E G+K+RYY KF++S P+ + + +V L
Sbjct: 486 NSTNQVMKRKRESAEDDSDDDQVHDEVRLWEDGFKDRYYESKFDVS-PDNL-AFRNNVAL 543
Query: 478 KYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDLEITFFLGE-PFRPFDQLMG 536
+YV GLCWV RYYYQ SW+W++PYHYAPFASD ++ L F G PFRP +QLMG
Sbjct: 544 QYVRGLCWVLRYYYQGCASWKWYFPYHYAPFASDFINIGGLSTEFEKGTTPFRPLEQLMG 603
Query: 537 TLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLR 596
PAASS +P + LM +P SPI FYP DF+ID+NGK+FAWQG+ LPF+DEK L +
Sbjct: 604 VFPAASSKHIPAPWAKLMINPRSPIIDFYPEDFKIDLNGKKFAWQGIALLPFVDEKRLFK 663
Query: 597 QTKKLEVFLTEEELFRNSVMLDLLYVHPQHPLYQQIT-LYCQLYHQLPPQDRFAWEIDVN 655
+ LTE E RN + LYV + Y I LY H L F E +
Sbjct: 664 ALEPYYDCLTEAEKKRNVQGDNRLYVGLGNSGYNFIKGLYTN--HVL-----FDAETQI- 715
Query: 656 ASGGMNGYIWLCERN-GLRSIIPSPVKGLP 684
M G + L + G + +PSP+ GLP
Sbjct: 716 CIDNMRGMVLLADDCVGDGATLPSPINGLP 745
>gi|407036374|gb|EKE38129.1| 5'-3' exonuclease domain containing protein [Entamoeba nuttalli
P19]
Length = 572
Score = 465 bits (1196), Expect = e-128, Method: Compositional matrix adjust.
Identities = 260/595 (43%), Positives = 360/595 (60%), Gaps = 79/595 (13%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP+F+RWL+ ++P I+D + G + D+++PN NG+E+DN Y+DMNG+I
Sbjct: 1 MGVPSFFRWLSQKFP-KIIDGCQ------GSFHEQYNDLNEPNFNGVEYDNFYIDMNGLI 53
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPCFHP + +P + +D+ + Y+D++ +VRPRKLLYLA+DGVAPRAKMNQQR+RRF
Sbjct: 54 HPCFHPQDRQSPETIEDMMVMLGRYLDYLIDIVRPRKLLYLAVDGVAPRAKMNQQRSRRF 113
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSA-KEKP--ETCDSNVITPGTQFMAVLSAALQY 177
++AKDA AE L+ E K+++ E P + DSN ITPGT+FM+V+S L+
Sbjct: 114 KSAKDAENAE-----LKHAEENRNKVMNGLPEVPYIKPLDSNCITPGTEFMSVVSKTLKK 168
Query: 178 FIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADL 237
+I+ R++Q W VILSD+ VPGEGEHKIM +IR Q+ P ++PNT HC+YGLDADL
Sbjct: 169 YIKERMSQSSYWNKLVVILSDSGVPGEGEHKIMDFIRRQKESPDYNPNTHHCMYGLDADL 228
Query: 238 IMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAEC-HGKPGDNPADWNGVDDTP 296
IMLSLATHE FSI+RE + +QE+C++C + H +C H K D +D
Sbjct: 229 IMLSLATHERFFSIIREKVFF--EQEQCYICNDI-HSPDKCPHRK------DIGAMDTI- 278
Query: 297 IHKKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEI 356
K +QFL+ +LR YLQ L + FER VDDF+F CF VGNDFLPH+P+L+I
Sbjct: 279 --TKPFQFLHCHILRGYLQITLKVEG----FEFERCVDDFIFFCFLVGNDFLPHIPSLDI 332
Query: 357 REGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAY- 415
R+GA++LLM VY REF GGY+T++G + + + F+Q V E I +K+ + ++ Y
Sbjct: 333 RDGAVDLLMKVY-REFLPHGGYITESGSLNVTNAKNFLQEVGKEEPAILEKKCQKEKNYA 391
Query: 416 -----------------------------------EYNEAMKLN----ARRESSEELLQA 436
E E +K + E E L+A
Sbjct: 392 KRRLDNQIRDLEIKKANVYENSTLKSTESINTLTPEQQEQLKTQEAEIKKIEDEERKLRA 451
Query: 437 PV---AVADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQD 493
+ D VKLGEPGY +RYY+ KF+I NP++ + +D+V Y EG+ WV YYY+
Sbjct: 452 DFEQKELTDEVKLGEPGYTQRYYSVKFKI-NPKQDTQKIRDIVHSYFEGMNWVLGYYYKG 510
Query: 494 VCSWQWFYPYHYAPFASDLKDLSD--LEITFFLGEPFRPFDQLMGTLPAASSSAL 546
SW W+YPY YAPFA D+ + D EI + PFRPF+QLM LP S S +
Sbjct: 511 CQSWDWYYPYLYAPFAEDMGEYVDYNFEIKYKESTPFRPFEQLMSVLPPRSKSLI 565
>gi|148696569|gb|EDL28516.1| 5'-3' exoribonuclease 2, isoform CRA_d [Mus musculus]
Length = 1002
Score = 464 bits (1195), Expect = e-128, Method: Compositional matrix adjust.
Identities = 229/416 (55%), Positives = 298/416 (71%), Gaps = 3/416 (0%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPAF+RWL+ +YP IV+ VEE P+ + GV PVD SKPNPN +EFDNLYLDMNGII
Sbjct: 20 MGVPAFFRWLSRKYPSIIVNCVEEKPK-ECNGVKIPVDASKPNPNDVEFDNLYLDMNGII 78
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ KPAP + D++ +IF+YID +F +VRPR+LLY+AIDGVAPRAKMNQQR+RRF
Sbjct: 79 HPCTHPEDKPAPKNEDEMMVAIFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRF 138
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQ 180
RA+K+ EA E++R+R+E G L +E E DSN ITPGT+FM L+ L+Y+I
Sbjct: 139 RASKEGMEAAVEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIA 198
Query: 181 ARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
RLN PGW+ VILSDA+ PGEGEHKIM YIR QR P DPNT HCL G DADLIML
Sbjct: 199 DRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIML 258
Query: 241 SLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDT-PIHK 299
LATHE +F+I+RE P + + C +C Q GH +C G P + + + D+ P +
Sbjct: 259 GLATHEPNFTIIREEFK-PNKPKPCALCNQFGHEVKDCEGLPREKKGKHDELADSLPCAE 317
Query: 300 KKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREG 359
++ FL + VLREYL+ EL + + PFP + ER +DD+VF+CFFVGNDFLPH+P+LEIREG
Sbjct: 318 GEFIFLRLNVLREYLERELTMASLPFPFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREG 377
Query: 360 AINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAY 415
AI+ L+++Y+ GGYLT++G V L RV+ + +V ED IF+KR + ++
Sbjct: 378 AIDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSF 433
Score = 205 bits (522), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 115/255 (45%), Positives = 154/255 (60%), Gaps = 14/255 (5%)
Query: 442 DTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFY 501
D V+L E G+K+RYY +KF++ +E K ++ VV YVEGLCWV RYYYQ SW+W+Y
Sbjct: 526 DNVRLWEAGWKQRYYKNKFDVDAADE--KFRRKVVQSYVEGLCWVLRYYYQGCASWKWYY 583
Query: 502 PYHYAPFASDLKDLSDLEITFFLG-EPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSP 560
P+HYAPFASD + ++D+ F G +PF+P +QLMG PAAS + LP +R LM+DP S
Sbjct: 584 PFHYAPFASDFEGIADMSSEFEKGTKPFKPLEQLMGVFPAASGNFLPPTWRKLMSDPDSS 643
Query: 561 IYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLL 620
I FYP DF ID+NGK++AWQGV LPF+DE+ L +++ LT EE RNS+ D+L
Sbjct: 644 IIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEENRRNSLGGDVL 703
Query: 621 YVHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDV--NASGGMNGYIWLCERNGL-RSIIP 677
+V HPL I Q P +DV G+ G L E L +
Sbjct: 704 FVGKLHPLRDFILELYQTGSTEP--------VDVPPELCHGIQGTFSLDEEAILPDQTVC 755
Query: 678 SPVKGLPDIERNQAM 692
SPV L D+ +N A+
Sbjct: 756 SPVPMLRDLTQNTAV 770
>gi|26327149|dbj|BAC27318.1| unnamed protein product [Mus musculus]
Length = 952
Score = 464 bits (1195), Expect = e-128, Method: Compositional matrix adjust.
Identities = 229/416 (55%), Positives = 298/416 (71%), Gaps = 3/416 (0%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPAF+RWL+ +YP IV+ VEE P+ + GV PVD SKPNPN +EFDNLYLDMNGII
Sbjct: 1 MGVPAFFRWLSRKYPSIIVNCVEEKPK-ECNGVKIPVDASKPNPNDVEFDNLYLDMNGII 59
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ KPAP + D++ +IF+YID +F +VRPR+LLY+AIDGVAPRAKMNQQR+RRF
Sbjct: 60 HPCTHPEDKPAPKNEDEMMVAIFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRF 119
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQ 180
RA+K+ EA E++R+R+E G L +E E DSN ITPGT+FM L+ L+Y+I
Sbjct: 120 RASKEGMEAAVEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIA 179
Query: 181 ARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
RLN PGW+ VILSDA+ PGEGEHKIM YIR QR P DPNT HCL G DADLIML
Sbjct: 180 DRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIML 239
Query: 241 SLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDT-PIHK 299
LATHE +F+I+RE P + + C +C Q GH +C G P + + + D+ P +
Sbjct: 240 GLATHEPNFTIIREEFK-PNKPKPCALCNQFGHEVKDCEGLPREKKGKHDELADSLPCAE 298
Query: 300 KKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREG 359
++ FL + VLREYL+ EL + + PFP + ER +DD+VF+CFFVGNDFLPH+P+LEIREG
Sbjct: 299 GEFIFLRLNVLREYLERELTMASLPFPFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREG 358
Query: 360 AINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAY 415
AI+ L+++Y+ GGYLT++G V L RV+ + +V ED IF+KR + ++
Sbjct: 359 AIDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSF 414
Score = 204 bits (520), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 116/259 (44%), Positives = 156/259 (60%), Gaps = 22/259 (8%)
Query: 442 DTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFY 501
D V+L E G+K+RYY +KF++ +E K ++ VV YVEGLCWV RYYYQ SW+W+Y
Sbjct: 507 DNVRLWEAGWKQRYYKNKFDVDAADE--KFRRKVVQSYVEGLCWVLRYYYQGCASWKWYY 564
Query: 502 PYHYAPFASDLKDLSDLEITFFLG-EPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSP 560
P+HYAPFASD + ++D+ F G +PF+P +QLMG PAAS + LP +R LM+DP S
Sbjct: 565 PFHYAPFASDFEGIADMSSEFEKGTKPFKPLEQLMGVFPAASGNFLPPTWRKLMSDPDSS 624
Query: 561 IYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLL 620
I FYP DF ID+NGK++AWQGV LPF+DE+ L +++ LT EE RNS+ D+L
Sbjct: 625 IIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEENRRNSLGGDVL 684
Query: 621 YVHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDV--NASGGMNGYIWLCERNGLRSIIP- 677
+V HPL I Q P +DV G+ G L E +I+P
Sbjct: 685 FVGKLHPLRDFILELYQTGSTEP--------VDVPHELCHGIQGTFSLDE----EAILPD 732
Query: 678 ----SPVKGLPDIERNQAM 692
SPV L D+ +N A+
Sbjct: 733 QKVCSPVPMLRDLTQNTAV 751
>gi|117606214|ref|NP_036047.2| 5'-3' exoribonuclease 2 [Mus musculus]
gi|30173483|sp|Q9DBR1.1|XRN2_MOUSE RecName: Full=5'-3' exoribonuclease 2; AltName: Full=Protein Dhm1
gi|12836253|dbj|BAB23573.1| unnamed protein product [Mus musculus]
gi|26343603|dbj|BAC35458.1| unnamed protein product [Mus musculus]
gi|32451718|gb|AAH54743.1| 5'-3' exoribonuclease 2 [Mus musculus]
gi|74188828|dbj|BAE39193.1| unnamed protein product [Mus musculus]
gi|148696571|gb|EDL28518.1| 5'-3' exoribonuclease 2, isoform CRA_f [Mus musculus]
Length = 951
Score = 464 bits (1194), Expect = e-128, Method: Compositional matrix adjust.
Identities = 229/416 (55%), Positives = 298/416 (71%), Gaps = 3/416 (0%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPAF+RWL+ +YP IV+ VEE P+ + GV PVD SKPNPN +EFDNLYLDMNGII
Sbjct: 1 MGVPAFFRWLSRKYPSIIVNCVEEKPK-ECNGVKIPVDASKPNPNDVEFDNLYLDMNGII 59
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ KPAP + D++ +IF+YID +F +VRPR+LLY+AIDGVAPRAKMNQQR+RRF
Sbjct: 60 HPCTHPEDKPAPKNEDEMMVAIFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRF 119
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQ 180
RA+K+ EA E++R+R+E G L +E E DSN ITPGT+FM L+ L+Y+I
Sbjct: 120 RASKEGMEAAVEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIA 179
Query: 181 ARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
RLN PGW+ VILSDA+ PGEGEHKIM YIR QR P DPNT HCL G DADLIML
Sbjct: 180 DRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIML 239
Query: 241 SLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDT-PIHK 299
LATHE +F+I+RE P + + C +C Q GH +C G P + + + D+ P +
Sbjct: 240 GLATHEPNFTIIREEFK-PNKPKPCALCNQFGHEVKDCEGLPREKKGKHDELADSLPCAE 298
Query: 300 KKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREG 359
++ FL + VLREYL+ EL + + PFP + ER +DD+VF+CFFVGNDFLPH+P+LEIREG
Sbjct: 299 GEFIFLRLNVLREYLERELTMASLPFPFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREG 358
Query: 360 AINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAY 415
AI+ L+++Y+ GGYLT++G V L RV+ + +V ED IF+KR + ++
Sbjct: 359 AIDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSF 414
Score = 205 bits (521), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 115/255 (45%), Positives = 154/255 (60%), Gaps = 14/255 (5%)
Query: 442 DTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFY 501
D V+L E G+K+RYY +KF++ +E K ++ VV YVEGLCWV RYYYQ SW+W+Y
Sbjct: 507 DNVRLWEAGWKQRYYKNKFDVDAADE--KFRRKVVQSYVEGLCWVLRYYYQGCASWKWYY 564
Query: 502 PYHYAPFASDLKDLSDLEITFFLG-EPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSP 560
P+HYAPFASD + ++D+ F G +PF+P +QLMG PAAS + LP +R LM+DP S
Sbjct: 565 PFHYAPFASDFEGIADMSSEFEKGTKPFKPLEQLMGVFPAASGNFLPPTWRKLMSDPDSS 624
Query: 561 IYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLL 620
I FYP DF ID+NGK++AWQGV LPF+DE+ L +++ LT EE RNS+ D+L
Sbjct: 625 IIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEENRRNSLGGDVL 684
Query: 621 YVHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDV--NASGGMNGYIWLCERNGL-RSIIP 677
+V HPL I Q P +DV G+ G L E L +
Sbjct: 685 FVGKLHPLRDFILELYQTGSTEP--------VDVPPELCHGIQGTFSLDEEAILPDQTVC 736
Query: 678 SPVKGLPDIERNQAM 692
SPV L D+ +N A+
Sbjct: 737 SPVPMLRDLTQNTAV 751
>gi|383854346|ref|XP_003702682.1| PREDICTED: 5'-3' exoribonuclease 2 homolog [Megachile rotundata]
Length = 944
Score = 464 bits (1193), Expect = e-128, Method: Compositional matrix adjust.
Identities = 232/423 (54%), Positives = 302/423 (71%), Gaps = 7/423 (1%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPAF+RWL+ +YP IV+ +E+ P + GV PV+ + PNPNG+EFDNLYLDMNGII
Sbjct: 1 MGVPAFFRWLSRKYPSVIVECIEQKP-ITTNGVRVPVNSADPNPNGVEFDNLYLDMNGII 59
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ KPAP + D++ ++IF+ ID +F +VRPRKLLY+AIDGVAPRAKMNQQR+RRF
Sbjct: 60 HPCTHPEDKPAPKNEDEMMEAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLL-SAKEKPETCDSNVITPGTQFMAVLSAALQYFI 179
RA+K+ E E +R+R E G L K K E DSN ITPGT FMA LS L Y+I
Sbjct: 120 RASKETNEKINEIQRIRSELTLKGASLPPEKPKEEHFDSNCITPGTPFMARLSKCLHYYI 179
Query: 180 QARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIM 239
RLN PGW+ KVILSDANVPGEGEHKIM +IR QR P DPNT+H L G DADLIM
Sbjct: 180 HDRLNNDPGWRNIKVILSDANVPGEGEHKIMDFIRRQRAQPDHDPNTQHVLCGADADLIM 239
Query: 240 LSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIHK 299
L LATHE +F+I+RE P + + C +CGQ+GH EC G + + N +
Sbjct: 240 LGLATHEPNFTIIREEFK-PNKPKPCDICGQLGHEMQECTGSEPNQKEEDNAFGS----E 294
Query: 300 KKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREG 359
++ F+ + VLREYL+ EL +PN PF +FER++DD+VF+CFFVGNDFLPH+P+LEIREG
Sbjct: 295 CQFIFVRLNVLREYLERELQMPNLPFKYDFERVIDDWVFMCFFVGNDFLPHLPSLEIREG 354
Query: 360 AINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYEYNE 419
AI+ L+++Y++ GG+LTD+G+V LDRV+ + + ED+IF+KR + + A++ E
Sbjct: 355 AIDRLVNLYKKTVYKTGGFLTDSGDVNLDRVQLIMSELGDVEDEIFKKRQQNELAFKQRE 414
Query: 420 AMK 422
K
Sbjct: 415 KDK 417
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 113/247 (45%), Positives = 147/247 (59%), Gaps = 15/247 (6%)
Query: 442 DTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFY 501
D V+L E G+K+RYY KF++S P+ + + +V L+YV GLCWV RYYYQ SW+W++
Sbjct: 512 DEVRLWEAGFKDRYYESKFDVS-PDNL-AFRNNVALQYVRGLCWVLRYYYQGCASWKWYF 569
Query: 502 PYHYAPFASDLKDLSDLEITFFLGE-PFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSP 560
PYHYAPFASD ++ L F G PFRP +QLMG PAASS +P + LM+DP SP
Sbjct: 570 PYHYAPFASDFINIGGLSTEFEKGTVPFRPLEQLMGVFPAASSKHVPAPWAKLMSDPRSP 629
Query: 561 IYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLL 620
I FYP DF+ID+NGK+FAWQGV LPF+DEK L + + LTE E RN D L
Sbjct: 630 IIDFYPEDFKIDLNGKKFAWQGVALLPFVDEKRLFKALEPYYDCLTEAEKKRNVRGDDRL 689
Query: 621 YVHPQHPLYQQIT-LYCQLYHQLPPQDRFAWEIDVNAS-GGMNGYIWLCERN-GLRSIIP 677
YV Y I LY + ++++ GM G + L E G + +P
Sbjct: 690 YVGLGSSGYNFIKGLYT---------NHVGYDVETPICIDGMRGTVLLAEDCVGDGATLP 740
Query: 678 SPVKGLP 684
SP+ GLP
Sbjct: 741 SPINGLP 747
>gi|149041185|gb|EDL95118.1| 5'-3' exoribonuclease 2 (predicted), isoform CRA_a [Rattus
norvegicus]
Length = 951
Score = 464 bits (1193), Expect = e-128, Method: Compositional matrix adjust.
Identities = 229/416 (55%), Positives = 298/416 (71%), Gaps = 3/416 (0%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPAF+RWL+ +YP IV+ VEE P+ + GV PVD SKPNPN +EFDNLYLDMNGII
Sbjct: 1 MGVPAFFRWLSRKYPSIIVNCVEEKPK-ECNGVKIPVDASKPNPNDVEFDNLYLDMNGII 59
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ KPAP + D++ +IF+YID +F +VRPR+LLY+AIDGVAPRAKMNQQR+RRF
Sbjct: 60 HPCTHPEDKPAPKNEDEMMVAIFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRF 119
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQ 180
RA+K+ EA E++R+R+E G L +E E DSN ITPGT+FM L+ L+Y+I
Sbjct: 120 RASKEGMEAAVEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIA 179
Query: 181 ARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
RLN PGW+ VILSDA+ PGEGEHKIM YIR QR P DPNT HCL G DADLIML
Sbjct: 180 DRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIML 239
Query: 241 SLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDT-PIHK 299
LATHE +F+I+RE P + + C +C Q GH +C G P + + + D+ P +
Sbjct: 240 GLATHEPNFTIIREEFK-PNKPKPCALCNQFGHEVKDCEGLPREKKGKHDELADSLPCAE 298
Query: 300 KKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREG 359
++ FL + VLREYL+ EL + + PFP + ER +DD+VF+CFFVGNDFLPH+P+LEIREG
Sbjct: 299 GEFIFLRLNVLREYLERELTMASLPFPFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREG 358
Query: 360 AINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAY 415
AI+ L+++Y+ GGYLT++G V L RV+ + +V ED IF+KR + ++
Sbjct: 359 AIDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSF 414
Score = 206 bits (524), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 115/255 (45%), Positives = 155/255 (60%), Gaps = 14/255 (5%)
Query: 442 DTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFY 501
D V+L E G+K+RYY +KF++ +E K ++ VV YVEGLCWV RYYYQ SW+W+Y
Sbjct: 507 DNVRLWEAGWKQRYYKNKFDVDAADE--KFRRKVVQSYVEGLCWVLRYYYQGCASWKWYY 564
Query: 502 PYHYAPFASDLKDLSDLEITFFLG-EPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSP 560
P+HYAPFASD + ++D+ F G +PF+P +QLMG PAAS + LP +R LM+DP S
Sbjct: 565 PFHYAPFASDFEGIADMPSEFEKGTKPFKPLEQLMGVFPAASGNFLPPTWRKLMSDPDSS 624
Query: 561 IYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLL 620
I FYP DF ID+NGK++AWQGV LPF+DE+ L +++ LT EE RNS+ D+L
Sbjct: 625 IIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEENRRNSLGSDVL 684
Query: 621 YVHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDV--NASGGMNGYIWLCERNGL-RSIIP 677
+V HPL+ I Q P +DV G+ G L E L +
Sbjct: 685 FVGKVHPLHDFILELYQTGSTEP--------VDVPPELCHGIQGKFSLDEEAILPDQTVC 736
Query: 678 SPVKGLPDIERNQAM 692
SPV L D+ +N A+
Sbjct: 737 SPVPMLRDLTQNTAI 751
>gi|83759101|gb|AAI10279.1| XRN2 protein [Bos taurus]
Length = 422
Score = 464 bits (1193), Expect = e-127, Method: Compositional matrix adjust.
Identities = 228/423 (53%), Positives = 300/423 (70%), Gaps = 3/423 (0%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPAF+RWL+ +YP IV+ VEE P+ + GV PVD SKPNPN +EFDN+YLDMNGII
Sbjct: 1 MGVPAFFRWLSRKYPSIIVNCVEEKPK-ECNGVKIPVDASKPNPNDVEFDNMYLDMNGII 59
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ KPAP + D++ +IF+YID +F +VRPR+LLY+AIDGVAPRAKMNQQR+RRF
Sbjct: 60 HPCTHPEDKPAPKNEDEMMVAIFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRF 119
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQ 180
RA+K+ EAE E++R+R+E G L +E E DSN ITPGT+FM L+ L+Y+I
Sbjct: 120 RASKEGMEAEIEKQRVREEILAKGGYLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIA 179
Query: 181 ARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
RLN PGW+ VILSDA+ PGEGEHKIM YIR QR P DPNT HCL G DADLIML
Sbjct: 180 DRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIML 239
Query: 241 SLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDT-PIHK 299
LATHE +F+I+RE P + + C +C Q GH +C G P + + + D+ P +
Sbjct: 240 GLATHEPNFTIIREEFK-PNKPKPCGLCNQFGHDVKDCEGLPREKKGKHDELADSLPCAE 298
Query: 300 KKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREG 359
++ F+ + VLREYL+ EL + + PF + ER +DD+VF+CFFVGNDFLPH+P+LEIREG
Sbjct: 299 GEFIFIRLSVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREG 358
Query: 360 AINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYEYNE 419
AI+ L+++Y+ GGYLT++G V L RV+ + +V ED IF+KR + ++ +
Sbjct: 359 AIDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSFRRRQ 418
Query: 420 AMK 422
K
Sbjct: 419 KKK 421
>gi|403416696|emb|CCM03396.1| predicted protein [Fibroporia radiculosa]
Length = 1140
Score = 463 bits (1192), Expect = e-127, Method: Compositional matrix adjust.
Identities = 220/410 (53%), Positives = 297/410 (72%), Gaps = 13/410 (3%)
Query: 2 GVPAFYRWLADRYPLSIVDVVEED----PQVDGEGVARPVDVSKPNPNGMEFDNLYLDMN 57
GVPA +RWL+ +YP I+ VVEE+ P V+G V P+D+S+PNPN MEFDNLYLDMN
Sbjct: 9 GVPALFRWLSKKYPKIILPVVEEEESKIPDVEGNEVVIPIDISRPNPNDMEFDNLYLDMN 68
Query: 58 GIIHPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRT 117
I+HPC HP+GKPAP + +++ +F Y + + +VRPR+LL++A+DGVAPRAKMNQQR+
Sbjct: 69 NIVHPCTHPEGKPAPETEEEMMLEVFKYTERLVNMVRPRRLLFMAVDGVAPRAKMNQQRS 128
Query: 118 RRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEK-PETCDSNVITPGTQFMAVLSAALQ 176
RRFR++++A + E + +E GK LS +EK ++ DSN ITPGT FM +L+++L+
Sbjct: 129 RRFRSSQEAKDKEEAHKEAIAMWEAMGKTLSEEEKNKKSWDSNAITPGTPFMDLLASSLR 188
Query: 177 YFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDAD 236
Y++ ++N PGW +VI+SDANVPGEGEHKIM +IR QR+ PG DPNTRH +YGLDAD
Sbjct: 189 YWVAHKMNTDPGWSQLQVIISDANVPGEGEHKIMEFIRRQRSNPGHDPNTRHVIYGLDAD 248
Query: 237 LIMLSLATHEIHFSILRE-VITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDT 295
LIMLSLATHE +F +LRE V G + C +CGQ GH AA+C G+ + +
Sbjct: 249 LIMLSLATHEPYFRVLREDVFFQEGSRTACRICGQEGHYAAQCTGQKAE-------ISKP 301
Query: 296 PIHKKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLE 355
P KK Y FL++ +LREYL+ EL++P+ PFP N E+ +DD+VFL FFVGNDFLPH+P+LE
Sbjct: 302 PPEKKPYVFLDVAILREYLEAELNLPHAPFPFNLEQAIDDWVFLIFFVGNDFLPHLPSLE 361
Query: 356 IREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIF 405
IREGAI+ L+ ++R E MGGYLT+ G+V L R ++ +A ED IF
Sbjct: 362 IREGAIDTLLRIWREELPRMGGYLTNHGQVELSRAHIILEGLAQREDDIF 411
Score = 204 bits (520), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 114/254 (44%), Positives = 149/254 (58%), Gaps = 11/254 (4%)
Query: 442 DTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFY 501
D VKL EPGY+ERYY KF + + + +K V Y+EG+ WV +YYYQ SWQW+Y
Sbjct: 671 DFVKLWEPGYQERYYRQKFGVEYGDV--EFRKKVAKHYIEGMAWVLQYYYQGTPSWQWYY 728
Query: 502 PYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPI 561
PYH+APFASD K ++ I F G+PF+PF+QLM PAAS +P+ + LMT+ SSPI
Sbjct: 729 PYHFAPFASDFKTAQNMSIKFDPGQPFKPFEQLMSVFPAASRHLIPKVFHELMTEESSPI 788
Query: 562 YKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLY 621
FYP FQIDMNGK+ AWQGV LPFIDE+ LL LT+EE RN ++LY
Sbjct: 789 IDFYPSTFQIDMNGKKMAWQGVALLPFIDERRLLDAMTPRYSNLTDEEKRRNKWGNNVLY 848
Query: 622 VHPQHPLYQQI-TLYCQLYHQLPPQDRFAWEIDVNASGGMNGYIWLCERNGLRSIIPSPV 680
V +H LY + LY + P +D AS G+NG + S SP+
Sbjct: 849 VFEEHSLYPSLEALYGKRKTDEP------MPVDPKASKGINGSLLPNPDCIPGSTYYSPL 902
Query: 681 KG--LPDIERNQAM 692
G L DI ++++
Sbjct: 903 NGQNLADIRNDRSL 916
>gi|147771605|emb|CAN69284.1| hypothetical protein VITISV_028679 [Vitis vinifera]
Length = 321
Score = 463 bits (1192), Expect = e-127, Method: Compositional matrix adjust.
Identities = 245/321 (76%), Positives = 267/321 (83%), Gaps = 29/321 (9%)
Query: 76 DDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRFRAAKDAAEAEAEEER 135
+DVFKSIFDYIDH+F LVRPR+LLY+AIDGVAPRAKMNQQR+RRFRAAKDAAEAEAEEER
Sbjct: 30 NDVFKSIFDYIDHLFSLVRPRRLLYMAIDGVAPRAKMNQQRSRRFRAAKDAAEAEAEEER 89
Query: 136 LRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQARLNQIPGWQFTKVI 195
LRKEFE GK+LS KEKPET DSNVITPGT+FMAVLS ALQY+I +RLN+ PGW TKVI
Sbjct: 90 LRKEFEVEGKMLSPKEKPETSDSNVITPGTKFMAVLSVALQYYIHSRLNRNPGWCSTKVI 149
Query: 196 LSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIMLSLATHEIHFSILREV 255
LSD+NVPGEGEHKIMSYIR QRNL GF+PNTRHCLYGL +
Sbjct: 150 LSDSNVPGEGEHKIMSYIRSQRNLLGFNPNTRHCLYGL---------------------M 188
Query: 256 ITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIHKKKYQFLNIWVLREYLQ 315
IT PGQQEKC++CGQVGHLAAEC G VDDTPIHKKKYQFLNIWVLREYLQ
Sbjct: 189 ITPPGQQEKCYLCGQVGHLAAECRG--------IEVVDDTPIHKKKYQFLNIWVLREYLQ 240
Query: 316 YELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHVYRREFTAM 375
Y+L+I NPPF INFER++DDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHVYRREF+AM
Sbjct: 241 YDLEILNPPFEINFERLLDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHVYRREFSAM 300
Query: 376 GGYLTDAGEVLLDRVEKFIQS 396
GGYLTDAGE L + + IQS
Sbjct: 301 GGYLTDAGEHLPTPLSELIQS 321
>gi|395330505|gb|EJF62888.1| 5'-3' exoribonuclease 2 [Dichomitus squalens LYAD-421 SS1]
Length = 1182
Score = 462 bits (1190), Expect = e-127, Method: Compositional matrix adjust.
Identities = 238/480 (49%), Positives = 323/480 (67%), Gaps = 41/480 (8%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEED----PQVDGEGVARPVDVSKPNPNGMEFDNLYLDM 56
MGVPA +RWL+ +YP I+ V+E + P +G VA PV+++ PNPNG+EFD+LYLDM
Sbjct: 1 MGVPALFRWLSKKYPKIILPVIEAEQATIPDTEGNEVAVPVNIADPNPNGVEFDSLYLDM 60
Query: 57 NGIIHPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQR 116
NGI+HPC HP+GKPAP + +++ IF Y + + +VRPRKLL++AIDGVAPRAKMNQQR
Sbjct: 61 NGIVHPCTHPEGKPAPETEEEMMIEIFSYTERVVNMVRPRKLLFMAIDGVAPRAKMNQQR 120
Query: 117 TRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETC-DSNVITPGTQFMAVLSAAL 175
+RRFR+A++A E E + +E GK LS +EK + DSN ITPGT FM +L+++L
Sbjct: 121 SRRFRSAQEAKEKEEARKESIAMWEAMGKTLSEEEKNKKAWDSNAITPGTPFMDLLASSL 180
Query: 176 QYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDA 235
+Y++ ++N PGW+ +VI+SDA+VPGEGEHKIM +IR QR+ PG DPNT H +YGLDA
Sbjct: 181 RYWVVYKMNTDPGWKDVQVIISDASVPGEGEHKIMDFIRRQRSNPGHDPNTHHVIYGLDA 240
Query: 236 DLIMLSLATHEIHFSILRE-VITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDD 294
DLIMLSLATHE HF +LRE V G + C +CGQ GH AA+C G + +
Sbjct: 241 DLIMLSLATHEPHFRVLREDVFHQEGSRTACRICGQEGHYAAQCTGTKAE-------IKK 293
Query: 295 TPIHKKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTL 354
TP KK + FL++ +LREYL+ EL++PN PFP NFE+ +DD+V L FFVGNDFLPH+P+L
Sbjct: 294 TPPEKKPFIFLDVAILREYLEAELNVPNVPFPFNFEQAIDDWVLLIFFVGNDFLPHLPSL 353
Query: 355 EIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQ-------- 406
EIREGAI+ L+ ++R E MGGY+T+ G++ L R + ++ +A ED+IF+
Sbjct: 354 EIREGAIDTLLKIWRTELPRMGGYITNHGQLELSRAQIILEGLARREDEIFRRRREAEER 413
Query: 407 -----KRTRIQQAYEYNEAMKLNARRESSEELLQAPV------------AVADTVKLGEP 449
KR +I++ N A +A S L APV A AD++ LG P
Sbjct: 414 QDQNAKRRKIEKETGSNGA---SAGPSPSLNLTVAPVAPGSLPPRPDFAAKADSIGLGGP 470
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 113/257 (43%), Positives = 155/257 (60%), Gaps = 17/257 (6%)
Query: 442 DTVKLGEPGYKERYYADKF--EISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQW 499
D VKL EPGY+ERYY+ KF E S+ E +K V Y+EG+ WV +YYYQ SW W
Sbjct: 679 DQVKLWEPGYRERYYSQKFGAEYSDKE----FRKQVTKSYIEGMAWVLQYYYQGTPSWHW 734
Query: 500 FYPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSS 559
+YP+H+APFA+D +DL ++I F LG+PF+PF+QLMG PA+S S +P + +LMT+ +S
Sbjct: 735 YYPFHFAPFAADFEDLDKMDIDFTLGQPFKPFEQLMGVFPASSRSHIPATFHDLMTEDTS 794
Query: 560 PIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDL 619
PI FYP FQIDMNGKR AWQGV LPFIDEK LL L+++E RN +
Sbjct: 795 PIIDFYPSTFQIDMNGKRMAWQGVALLPFIDEKRLLDAMGPRYPNLSDDEKRRNQWGNNF 854
Query: 620 LYVHPQHPLYQQI-TLYCQLYHQLPPQDRFAWEIDVNASGGMNGYIWL---CERNGLRSI 675
L+V+ H LY + LY + P I+ S G+NG + C +
Sbjct: 855 LFVYEAHALYPTLEALYGKRKKDEP------LPINPKLSKGINGSLLPNPDCIPDSTY-F 907
Query: 676 IPSPVKGLPDIERNQAM 692
P P + LP+I+ ++++
Sbjct: 908 SPLPSQDLPNIKNDRSL 924
>gi|74207538|dbj|BAE40020.1| unnamed protein product [Mus musculus]
Length = 951
Score = 462 bits (1190), Expect = e-127, Method: Compositional matrix adjust.
Identities = 229/416 (55%), Positives = 297/416 (71%), Gaps = 3/416 (0%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPAF+RWL+ +YP IV+ VEE P+ + GV PVD SKPNPN +EFDNLYLDMNGII
Sbjct: 1 MGVPAFFRWLSRKYPSIIVNCVEEKPK-ECNGVKIPVDASKPNPNDVEFDNLYLDMNGII 59
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ KPAP + D++ +IF+YID +F +VRPR+LLY+AIDGVAPRAKMNQQR+RRF
Sbjct: 60 HPCTHPEDKPAPKNEDEMMVAIFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRF 119
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQ 180
RA+K+ EA E++R+R+E G L +E E DSN ITPGT+FM L+ L+Y+I
Sbjct: 120 RASKEGMEAAVEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIA 179
Query: 181 ARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
RLN PGW+ VILSDA+ PGEGEHKIM YIR QR P DPNT HCL G DADLIML
Sbjct: 180 DRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIML 239
Query: 241 SLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDT-PIHK 299
LATHE +F+I+RE P + + C +C Q GH +C G P + + + D+ P +
Sbjct: 240 GLATHEPNFTIIREEFK-PNKPKPCALCNQFGHEVKDCEGLPREKKGKHDELADSLPCAE 298
Query: 300 KKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREG 359
++ FL VLREYL+ EL + + PFP + ER +DD+VF+CFFVGNDFLPH+P+LEIREG
Sbjct: 299 GEFIFLRPNVLREYLERELTMASLPFPFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREG 358
Query: 360 AINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAY 415
AI+ L+++Y+ GGYLT++G V L RV+ + +V ED IF+KR + ++
Sbjct: 359 AIDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSF 414
Score = 205 bits (521), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 115/255 (45%), Positives = 154/255 (60%), Gaps = 14/255 (5%)
Query: 442 DTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFY 501
D V+L E G+K+RYY +KF++ +E K ++ VV YVEGLCWV RYYYQ SW+W+Y
Sbjct: 507 DNVRLWEAGWKQRYYKNKFDVDAADE--KFRRKVVQSYVEGLCWVLRYYYQGCASWKWYY 564
Query: 502 PYHYAPFASDLKDLSDLEITFFLG-EPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSP 560
P+HYAPFASD + ++D+ F G +PF+P +QLMG PAAS + LP +R LM+DP S
Sbjct: 565 PFHYAPFASDFEGIADMSSEFEKGTKPFKPLEQLMGVFPAASGNFLPPTWRKLMSDPDSS 624
Query: 561 IYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLL 620
I FYP DF ID+NGK++AWQGV LPF+DE+ L +++ LT EE RNS+ D+L
Sbjct: 625 IIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEENRRNSLGGDVL 684
Query: 621 YVHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDV--NASGGMNGYIWLCERNGL-RSIIP 677
+V HPL I Q P +DV G+ G L E L +
Sbjct: 685 FVGKLHPLRDFILELYQTGSTEP--------VDVPPELCHGIQGTFSLDEEAILPDQTVC 736
Query: 678 SPVKGLPDIERNQAM 692
SPV L D+ +N A+
Sbjct: 737 SPVPMLRDLTQNTAV 751
>gi|355729473|gb|AES09879.1| 5'-3' exoribonuclease 2 [Mustela putorius furo]
Length = 412
Score = 462 bits (1189), Expect = e-127, Method: Compositional matrix adjust.
Identities = 228/409 (55%), Positives = 294/409 (71%), Gaps = 3/409 (0%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPAF+RWL+ +YP IV+ VEE P+ + GV PVD SKPNPN +EFDNLYLDMNGII
Sbjct: 1 MGVPAFFRWLSRKYPSIIVNCVEEKPK-ECNGVKIPVDASKPNPNDVEFDNLYLDMNGII 59
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ KPAP + D++ +IF+YID +F +VRPR+LLY+AIDGVAPRAKMNQQR+RRF
Sbjct: 60 HPCTHPEDKPAPKNEDEMMVAIFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRF 119
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQ 180
RA+K+ EA E++R+R+E G L +E E DSN ITPGT+FM L+ L+Y+I
Sbjct: 120 RASKEGMEAAVEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIA 179
Query: 181 ARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
RLN PGW+ VILSDA+ PGEGEHKIM YIR QR P DPNT HCL G DADLIML
Sbjct: 180 DRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIML 239
Query: 241 SLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDT-PIHK 299
LATHE +F+I+RE P + + C +C Q GH +C G P + + + D+ P +
Sbjct: 240 GLATHEPNFTIIREEFK-PNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADSLPCAE 298
Query: 300 KKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREG 359
++ FL + VLREYL+ EL + + PF + ER +DD+VF+CFFVGNDFLPH+P+LEIREG
Sbjct: 299 GEFIFLRLNVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREG 358
Query: 360 AINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKR 408
AI+ L+++Y+ GGYLT++G V L RV+ + +V ED IF+KR
Sbjct: 359 AIDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKR 407
>gi|301069399|ref|NP_001001944.2| 5'-3' exoribonuclease 2 [Danio rerio]
Length = 952
Score = 462 bits (1189), Expect = e-127, Method: Compositional matrix adjust.
Identities = 228/416 (54%), Positives = 299/416 (71%), Gaps = 3/416 (0%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPAF+RWL+ +YP IV +EE + + GV PVD SKPNPN +EFDNLYLDMNGII
Sbjct: 1 MGVPAFFRWLSRKYPSIIVHCLEEKAK-EYNGVKIPVDTSKPNPNEVEFDNLYLDMNGII 59
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ KPAP + D++ +IF+YID +F +VRPR++LY+AIDGVAPRAKMNQQR+RRF
Sbjct: 60 HPCTHPEDKPAPKNEDEMMVAIFEYIDRLFNIVRPRRVLYMAIDGVAPRAKMNQQRSRRF 119
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQ 180
RA+K+ E E++++R+E E G L +E E DSN ITPGT+FM L+ L+Y++
Sbjct: 120 RASKEGVELAEEKQKMREEVIERGGYLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYVA 179
Query: 181 ARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
RL PGW+ V LSDA+VPGEGEHKIM YIR QR P DPNT HCL G DADLIML
Sbjct: 180 DRLTNDPGWRNITVFLSDASVPGEGEHKIMDYIRRQRGQPNHDPNTHHCLCGADADLIML 239
Query: 241 SLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDT-PIHK 299
LATHE +F+I+RE P + C +C Q+GH +C G P + + + DT P+ +
Sbjct: 240 GLATHEPNFTIIREEFK-PNKPRPCALCSQMGHEIKDCQGLPREKQGEHDEFADTIPVSE 298
Query: 300 KKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREG 359
+++ F+ + VLREYL+ EL + + PFP +FER VDD+VF+CFFVGNDFLPH+P+LEIREG
Sbjct: 299 QEFIFIRLAVLREYLERELTMASLPFPFSFERSVDDWVFMCFFVGNDFLPHLPSLEIREG 358
Query: 360 AINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAY 415
AI+ L+ +Y+ GGYLT+ G V L+RVE +Q+V V ED IF+KR +++
Sbjct: 359 AIDRLVGIYKDVVHKTGGYLTENGFVNLERVELIMQAVGVAEDNIFKKRKEDDESF 414
Score = 204 bits (520), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 114/253 (45%), Positives = 154/253 (60%), Gaps = 10/253 (3%)
Query: 442 DTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFY 501
D V+L E G+K+RYY KF++ + D+ +K VV YVEGLCWV RYYYQ SW+W++
Sbjct: 515 DNVRLWEDGWKQRYYKTKFDVDATD--DEFRKKVVQSYVEGLCWVLRYYYQGCASWKWYF 572
Query: 502 PYHYAPFASDLKDLSDLEITFFLG-EPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSP 560
P+HYAPFASD KD+ + F G +PF+P +QLMG PAAS + LP +R LM+DP S
Sbjct: 573 PFHYAPFASDFKDIKGMFSDFEKGTKPFKPLEQLMGVFPAASGNFLPTTWRALMSDPESS 632
Query: 561 IYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLL 620
I FYP DF ID+NGK++AWQGV LPF+DE+ L ++ LT EE+ RNS+ D++
Sbjct: 633 IIDFYPDDFAIDLNGKKYAWQGVALLPFVDERRLRAALAEVYNDLTPEEVRRNSLGSDVM 692
Query: 621 YVHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVNASGGMNGYIWLCERNGL-RSIIPSP 679
+V H L I +LY + A EI G+ G + L E L ++ SP
Sbjct: 693 FVGRSHALCDFIQ---ELYRA---ESHTATEIPAEFCHGIQGILNLDEDPILPDKLVESP 746
Query: 680 VKGLPDIERNQAM 692
+ L DI N A+
Sbjct: 747 IPVLRDISSNCAI 759
>gi|71895763|ref|NP_001026204.1| 5'-3' exoribonuclease 2 [Gallus gallus]
gi|75571238|sp|Q5ZIP4.1|XRN2_CHICK RecName: Full=5'-3' exoribonuclease 2
gi|53135140|emb|CAG32399.1| hypothetical protein RCJMB04_24h23 [Gallus gallus]
Length = 949
Score = 462 bits (1189), Expect = e-127, Method: Compositional matrix adjust.
Identities = 228/409 (55%), Positives = 295/409 (72%), Gaps = 3/409 (0%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPAF+RWL+ +YP IV+ VEE + + GV VD SKPNPN +EFDNLYLDMNGII
Sbjct: 1 MGVPAFFRWLSRKYPSIIVNCVEEKAK-ECNGVKASVDTSKPNPNEVEFDNLYLDMNGII 59
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ KPAP + D++ +IF+YID IF +VRPR+LLY+AIDGVAPRAKMNQQR+RRF
Sbjct: 60 HPCTHPEDKPAPKNEDEMMVAIFEYIDRIFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRF 119
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQ 180
RA+K+ EA E++++R+E G +L +E E DSN ITPGT+FM L+ L+Y+I
Sbjct: 120 RASKEGMEAAEEKQKIRQEILAKGGILPPEEVKERFDSNCITPGTEFMDNLAKCLRYYIA 179
Query: 181 ARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
RLN PGW+ VILSDA+ PGEGEHKIM YIR QR P DPNT HCL G DADLIML
Sbjct: 180 DRLNSDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIML 239
Query: 241 SLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDT-PIHK 299
LATHE HF+I+RE P + + C +C Q+GH +C G P + + D+ P +
Sbjct: 240 GLATHEPHFTIIREEFK-PNKPKPCALCNQMGHEVKDCQGLPREKQGKHDQFADSLPASE 298
Query: 300 KKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREG 359
+++ F+ + VLREYL+ EL + + PF +FER VDD+VF+CFFVGNDFLPH+P+LEIREG
Sbjct: 299 QEFIFIRLCVLREYLERELTMASLPFTFDFERSVDDWVFMCFFVGNDFLPHLPSLEIREG 358
Query: 360 AINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKR 408
AI+ L+++Y+ GGYLT++G V L RV+ + +V ED IF+KR
Sbjct: 359 AIDRLVNIYKNVVHKTGGYLTESGFVNLQRVQMIMLAVGEVEDSIFKKR 407
Score = 205 bits (521), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 98/188 (52%), Positives = 130/188 (69%), Gaps = 3/188 (1%)
Query: 442 DTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFY 501
D ++L E G+K+RYY +KF++ +E K ++ VV YVEGLCWV RYYYQ SW W+Y
Sbjct: 506 DNIRLWESGWKQRYYKNKFDVDASDE--KFRRKVVQSYVEGLCWVLRYYYQGCASWNWYY 563
Query: 502 PYHYAPFASDLKDLSDLEITFFLG-EPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSP 560
P+HYAPFASD + ++D+ F G +PF+P +QLMG PAAS + LP +R LMTDP S
Sbjct: 564 PFHYAPFASDFEGIADMPSDFEKGSKPFKPLEQLMGVFPAASGNFLPPTWRKLMTDPESS 623
Query: 561 IYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLL 620
I FYP DF ID+NGK++AWQGV LPF+DE+ L +++ LT EE RNS+ D+L
Sbjct: 624 IIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEENRRNSLGGDVL 683
Query: 621 YVHPQHPL 628
+V HPL
Sbjct: 684 FVGKHHPL 691
>gi|349604825|gb|AEQ00267.1| 5'-3' exoribonuclease 2-like protein, partial [Equus caballus]
Length = 417
Score = 462 bits (1189), Expect = e-127, Method: Compositional matrix adjust.
Identities = 228/416 (54%), Positives = 296/416 (71%), Gaps = 3/416 (0%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPAF+RWL+ +YP IV VEE P+ + GV PVD SKPNPN +EFDNLYLDMNGII
Sbjct: 1 MGVPAFFRWLSRKYPSIIVSCVEEKPK-ECNGVKIPVDASKPNPNDVEFDNLYLDMNGII 59
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ KPAP + D++ +IF+YID +F +VRPR+LLY+AIDGVAPRAKMNQQR+RRF
Sbjct: 60 HPCTHPEDKPAPKNEDEMMVAIFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRF 119
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQ 180
RA+K+ EA E++R+R+E G L +E E DSN ITPGT+FM L+ L+Y+I
Sbjct: 120 RASKEGMEAAVEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIA 179
Query: 181 ARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
RLN PGW+ VILSDA+ PGEGEHKIM YIR QR P DPNT HCL G DADLIML
Sbjct: 180 DRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIML 239
Query: 241 SLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDT-PIHK 299
LATHE +F+I+RE P + + C +C Q GH +C G P + + + D+ P +
Sbjct: 240 GLATHEPNFTIIREEFK-PNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADSLPCAE 298
Query: 300 KKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREG 359
++ FL + VLREYL+ EL + + PF + ER +DD+VF+CFFVGNDFLPH+P+LEIREG
Sbjct: 299 GEFIFLRLNVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREG 358
Query: 360 AINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAY 415
AI+ L+++Y+ GGYLT++G V L RV+ + +V ED IF+KR + ++
Sbjct: 359 AIDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSF 414
>gi|308805328|ref|XP_003079976.1| 5'-3' exoribonuclease 1 (ISS) [Ostreococcus tauri]
gi|116058433|emb|CAL53622.1| 5'-3' exoribonuclease 1 (ISS) [Ostreococcus tauri]
Length = 1418
Score = 462 bits (1189), Expect = e-127, Method: Compositional matrix adjust.
Identities = 268/651 (41%), Positives = 356/651 (54%), Gaps = 93/651 (14%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP F+RWLA+RYPL ++ G P + DNLYLDMNG+I
Sbjct: 74 MGVPKFFRWLAERYPLLQQEIA---------GSQIP-----------KIDNLYLDMNGVI 113
Query: 61 HPCFHPDGKPAPT--SYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C H G T S D++ +F Y+DH+F + RP KLLY+AIDGVAPRAKMNQQR+R
Sbjct: 114 HNCSHGAGTDVNTRMSEDEMMSKVFAYLDHLFRMTRPNKLLYMAIDGVAPRAKMNQQRSR 173
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RFR+A +AA+ + EE R R E E G E DSN ITPGT+FMA L+ L+++
Sbjct: 174 RFRSASEAAK-DREEARRRGEPEPEG---------EPFDSNCITPGTEFMARLTEHLKFY 223
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
++ + + P W VILS V GEGEHKIM +IR R PG++PN HCLYGLDADLI
Sbjct: 224 VRKKQTEDPLWAKVTVILSGHEVRGEGEHKIMEHIRWARTQPGWEPNQTHCLYGLDADLI 283
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
ML+L THE HF +LREV+ G G+ G + E P D+
Sbjct: 284 MLALVTHEPHFCLLREVVKFGG--------GEKGQPSREILSNPTDD------------- 322
Query: 299 KKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIRE 358
+ L+I +LREYL E N F + ER++DDF+ LC VGNDFLP +PTL I E
Sbjct: 323 --GFILLHIGLLREYLDLEFREKNLSFGYDLERVIDDFILLCMLVGNDFLPALPTLNIAE 380
Query: 359 GAINLLMHVYRREFTAMGGYLT---DAGEVLLDRVEKFIQSVAVYEDQIF---------- 405
GA+N L VY +GGY+T G +R+EK + ++ +E Q+
Sbjct: 381 GALNTLFKVYHDTLPMLGGYITGDEGGGTFNAERLEKIMSIMSTFERQVLEDRALDVEKE 440
Query: 406 -QKRTRIQQAYEYNEAMKLNARRE-----------------SSEELLQAPVAVADTVKLG 447
+K+ R + + A +LN + SS+ ++ A ++ G
Sbjct: 441 EEKKARRNKRFGDGSASELNVEEKFDKDMSEMSETDGTPQVSSDPVMMNAAKRAMILEGG 500
Query: 448 EPG---YKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYH 504
E G +K++YY +K + E ++ Y +GL WV RYYY+ V SW W+YPYH
Sbjct: 501 EEGLQAWKDQYYREKLGLKMGEAAPLA--EIRQAYFDGLNWVLRYYYRGVASWTWYYPYH 558
Query: 505 YAPFASDL-KDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYK 563
YAP ASDL + L F GEPFRPF+QLM P +SS LPE +R+ M DP SP+ +
Sbjct: 559 YAPMASDLCAGMEKLTSEFDYGEPFRPFEQLMAVQPPSSSKLLPEPFRHFMEDPRSPLAE 618
Query: 564 FYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLE-VFLTEEELFRN 613
F+P D +D GKR W+GVV LPF+D L +E LT E+ RN
Sbjct: 619 FFPEDIPVDFEGKRNDWEGVVLLPFLDADRLKAAVASVEDSQLTAGEIARN 669
>gi|344279981|ref|XP_003411764.1| PREDICTED: 5'-3' exoribonuclease 2 [Loxodonta africana]
Length = 950
Score = 461 bits (1187), Expect = e-127, Method: Compositional matrix adjust.
Identities = 228/416 (54%), Positives = 298/416 (71%), Gaps = 3/416 (0%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPAF+RWL+ +YP IV+ VEE P+ + GV PVD SKPNPN +EFDNLYLDMNGII
Sbjct: 1 MGVPAFFRWLSRKYPSIIVNCVEEKPK-ECNGVKIPVDASKPNPNDVEFDNLYLDMNGII 59
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ KPAP + D++ +IF+YID +F +VRPR+LLY+AIDGVAPRAKMNQQR+RRF
Sbjct: 60 HPCTHPEDKPAPKNEDEMMVAIFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRF 119
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQ 180
RA+K+ EA E++R+R+E G L +E E DSN ITPGT+FM L+ L+Y+I
Sbjct: 120 RASKEGMEAAVEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIA 179
Query: 181 ARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
RLN PGW+ VILSDA+ PGEGEHKIM YIR QR P DPNT HCL G DADLIML
Sbjct: 180 DRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIML 239
Query: 241 SLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDT-PIHK 299
LATHE +F+I+RE P + + C +C Q GH +C G P + + + D+ P +
Sbjct: 240 GLATHEPNFTIIREEFK-PNKPKPCGLCNQFGHEVKDCEGLPREKRGKHDELADSLPCAE 298
Query: 300 KKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREG 359
++ FL + VLREYL+ EL + + PF + ER +DD+VF+CFFVGNDFLPH+P+LEIREG
Sbjct: 299 GEFIFLRLNVLREYLERELTMASLPFTFDIERSIDDWVFMCFFVGNDFLPHLPSLEIREG 358
Query: 360 AINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAY 415
AI+ L+++Y++ GGYLT++G V L RV+ + +V ED IF+KR + ++
Sbjct: 359 AIDRLVNIYKKVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSF 414
Score = 206 bits (523), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 113/253 (44%), Positives = 152/253 (60%), Gaps = 10/253 (3%)
Query: 442 DTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFY 501
D V+L E G+K+RYY +KF++ +E K ++ VV YVEGLCWV RYYYQ SW+W+Y
Sbjct: 507 DNVRLWEAGWKQRYYKNKFDVDAADE--KFRRKVVQSYVEGLCWVLRYYYQGCASWKWYY 564
Query: 502 PYHYAPFASDLKDLSDLEITFFLG-EPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSP 560
P+HYAPFASD + ++ + F G +PF+P +QLMG PAAS + LP +R LM+DP S
Sbjct: 565 PFHYAPFASDFEGIASMPSDFEKGTKPFKPLEQLMGVFPAASGNFLPPSWRKLMSDPDSS 624
Query: 561 IYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLL 620
I FYP DF ID+NGK++AWQGV LPF+DE+ L +++ LT EE RNS+ D+L
Sbjct: 625 IIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEETKRNSLGGDVL 684
Query: 621 YVHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVNASGGMNGYIWLCERNGL-RSIIPSP 679
+V HPL+ I Q P E+ G+ G L L I+ SP
Sbjct: 685 FVGKHHPLHDFILELYQTGSTEP------VEVPPELCHGIRGKFSLDGEAVLPDQIVCSP 738
Query: 680 VKGLPDIERNQAM 692
V L D+ N A+
Sbjct: 739 VPLLRDLSHNTAI 751
>gi|281339379|gb|EFB14963.1| hypothetical protein PANDA_012248 [Ailuropoda melanoleuca]
Length = 929
Score = 461 bits (1186), Expect = e-127, Method: Compositional matrix adjust.
Identities = 228/416 (54%), Positives = 297/416 (71%), Gaps = 3/416 (0%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPAF+RWL+ +YP IV+ VEE P+ + GV PVD SKPNPN +EFDNLYLDMNGII
Sbjct: 1 MGVPAFFRWLSRKYPSIIVNCVEEKPK-ECNGVKIPVDASKPNPNDVEFDNLYLDMNGII 59
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ KPAP + D++ +IF+YID +F +VRPR+LLY+AIDGVAPRAKMNQQR+RRF
Sbjct: 60 HPCTHPEDKPAPKNEDEMMVAIFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRF 119
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQ 180
RA+K+ EA E++R+R+E G L +E E DSN ITPGT+FM L+ L+Y+I
Sbjct: 120 RASKEGMEAAVEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIA 179
Query: 181 ARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
RLN PGW+ VILSDA+ PGEGEHKIM YIR QR P DPNT HCL G DADLIML
Sbjct: 180 DRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIML 239
Query: 241 SLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDT-PIHK 299
LATHE +F+I+RE P + + C +C Q GH +C G P + + + D+ P +
Sbjct: 240 GLATHEPNFTIIREEFK-PNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADSLPCAE 298
Query: 300 KKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREG 359
++ FL + VLREYL+ EL + + PF + ER +DD+VF+CFFVGNDFLPH+P+LEIREG
Sbjct: 299 GEFIFLRLNVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREG 358
Query: 360 AINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAY 415
AI+ L+++Y+ GGYLT++G V L RV+ + +V ED IF+KR + ++
Sbjct: 359 AIDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSF 414
Score = 209 bits (531), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 117/255 (45%), Positives = 158/255 (61%), Gaps = 14/255 (5%)
Query: 442 DTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFY 501
D V+L E G+K+RYY +KF++ +E K ++ VV YVEGLCWV RYYYQ SW+W+Y
Sbjct: 507 DNVRLWEAGWKQRYYKNKFDVDAADE--KFRRKVVQSYVEGLCWVLRYYYQGCASWKWYY 564
Query: 502 PYHYAPFASDLKDLSDLEITFFLG-EPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSP 560
P+HYAPFASD + ++D+ F G +PF+P +QLMG PAAS + LP +R LM+DP S
Sbjct: 565 PFHYAPFASDFEGIADMPSDFEKGTKPFKPLEQLMGVFPAASGNFLPPSWRKLMSDPDSS 624
Query: 561 IYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLL 620
I FYP DF ID+NGK++AWQGV LPF+DE+ L +++ LT EE RNS+ D+L
Sbjct: 625 IIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEETKRNSLGGDVL 684
Query: 621 YVHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDV--NASGGMNGYIWLCERNGL-RSIIP 677
+V HPL+ I +LY Q +DV G+ G L E L I+
Sbjct: 685 FVGKHHPLHDFI---LELY-----QTGSTELVDVPPELCHGIQGKFSLDEEAVLPDQIVC 736
Query: 678 SPVKGLPDIERNQAM 692
SPV L D+ +N A+
Sbjct: 737 SPVPMLRDLTQNTAI 751
>gi|351715914|gb|EHB18833.1| 5'-3' exoribonuclease 2 [Heterocephalus glaber]
Length = 950
Score = 461 bits (1186), Expect = e-127, Method: Compositional matrix adjust.
Identities = 228/416 (54%), Positives = 297/416 (71%), Gaps = 3/416 (0%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPAF+RWL+ +YP IV+ VEE P+ + GV PVD SKPNPN +EFDNLYLDMNGII
Sbjct: 1 MGVPAFFRWLSRKYPSIIVNCVEEKPK-ECNGVKIPVDASKPNPNDVEFDNLYLDMNGII 59
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ KPAP + D++ +IF+YID +F +VRPR+LLY+AIDGVAPRAKMNQQR+RRF
Sbjct: 60 HPCTHPEDKPAPKNEDEMMVAIFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRF 119
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQ 180
RA+K+ EA E++R+R+E G L +E E DSN ITPGT+FM L+ L+Y+I
Sbjct: 120 RASKEGMEAAIEKQRVREEIMAKGGYLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIA 179
Query: 181 ARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
RLN PGW+ VILSDA+ PGEGEHKIM YIR QR P DPNT HCL G DADLIML
Sbjct: 180 DRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIML 239
Query: 241 SLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDT-PIHK 299
LATHE +F+I+RE P + + C +C Q GH +C G P + + + D+ P +
Sbjct: 240 GLATHEPNFTIIREEFK-PNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDELGDSLPCAE 298
Query: 300 KKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREG 359
++ FL + VLREYL+ EL + + PF + ER +DD+VF+CFFVGNDFLPH+P+LEIREG
Sbjct: 299 GEFIFLRLNVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREG 358
Query: 360 AINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAY 415
AI+ L+++Y+ GGYLT++G V L RV+ + +V ED IF+KR + ++
Sbjct: 359 AIDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSF 414
Score = 207 bits (527), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 114/255 (44%), Positives = 156/255 (61%), Gaps = 14/255 (5%)
Query: 442 DTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFY 501
D V+L E G+K+RYY +KF++ +E K ++ VV YVEGLCWV RYYYQ SW+W+Y
Sbjct: 507 DNVRLWEAGWKQRYYKNKFDVDAADE--KFRRKVVQSYVEGLCWVLRYYYQGCASWKWYY 564
Query: 502 PYHYAPFASDLKDLSDLEITFFLG-EPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSP 560
P+HYAPFASD + ++D+ F G +PF+P +QLMG PAAS + LP +R LM+DP S
Sbjct: 565 PFHYAPFASDFEGIADMPSDFEKGTKPFKPLEQLMGVFPAASGNFLPPSWRKLMSDPDSS 624
Query: 561 IYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLL 620
I FYP DF ID+NGK++AWQGV LPF+DE+ L +++ LT EE RNS+ D+L
Sbjct: 625 IIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEENRRNSLGADVL 684
Query: 621 YVHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDV--NASGGMNGYIWLCERNGL-RSIIP 677
+V H L+ I+ Q P +DV G+ G L E L ++
Sbjct: 685 FVGKHHQLHDFISELYQTGSTEP--------VDVPPELCHGIQGKFSLDEEAVLPDQVVC 736
Query: 678 SPVKGLPDIERNQAM 692
SPV L D+ +N A+
Sbjct: 737 SPVPMLRDLTQNTAI 751
>gi|301775465|ref|XP_002923152.1| PREDICTED: 5'-3' exoribonuclease 2-like [Ailuropoda melanoleuca]
Length = 950
Score = 461 bits (1185), Expect = e-127, Method: Compositional matrix adjust.
Identities = 228/416 (54%), Positives = 297/416 (71%), Gaps = 3/416 (0%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPAF+RWL+ +YP IV+ VEE P+ + GV PVD SKPNPN +EFDNLYLDMNGII
Sbjct: 1 MGVPAFFRWLSRKYPSIIVNCVEEKPK-ECNGVKIPVDASKPNPNDVEFDNLYLDMNGII 59
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ KPAP + D++ +IF+YID +F +VRPR+LLY+AIDGVAPRAKMNQQR+RRF
Sbjct: 60 HPCTHPEDKPAPKNEDEMMVAIFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRF 119
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQ 180
RA+K+ EA E++R+R+E G L +E E DSN ITPGT+FM L+ L+Y+I
Sbjct: 120 RASKEGMEAAVEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIA 179
Query: 181 ARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
RLN PGW+ VILSDA+ PGEGEHKIM YIR QR P DPNT HCL G DADLIML
Sbjct: 180 DRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIML 239
Query: 241 SLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDT-PIHK 299
LATHE +F+I+RE P + + C +C Q GH +C G P + + + D+ P +
Sbjct: 240 GLATHEPNFTIIREEFK-PNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADSLPCAE 298
Query: 300 KKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREG 359
++ FL + VLREYL+ EL + + PF + ER +DD+VF+CFFVGNDFLPH+P+LEIREG
Sbjct: 299 GEFIFLRLNVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREG 358
Query: 360 AINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAY 415
AI+ L+++Y+ GGYLT++G V L RV+ + +V ED IF+KR + ++
Sbjct: 359 AIDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSF 414
Score = 208 bits (530), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 117/256 (45%), Positives = 158/256 (61%), Gaps = 16/256 (6%)
Query: 442 DTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFY 501
D V+L E G+K+RYY +KF++ +E K ++ VV YVEGLCWV RYYYQ SW+W+Y
Sbjct: 507 DNVRLWEAGWKQRYYKNKFDVDAADE--KFRRKVVQSYVEGLCWVLRYYYQGCASWKWYY 564
Query: 502 PYHYAPFASDLKDLSDLEITFFLG-EPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSP 560
P+HYAPFASD + ++D+ F G +PF+P +QLMG PAAS + LP +R LM+DP S
Sbjct: 565 PFHYAPFASDFEGIADMPSDFEKGTKPFKPLEQLMGVFPAASGNFLPPSWRKLMSDPDSS 624
Query: 561 IYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLL 620
I FYP DF ID+NGK++AWQGV LPF+DE+ L +++ LT EE RNS+ D+L
Sbjct: 625 IIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEETKRNSLGGDVL 684
Query: 621 YVHPQHPLYQQI-TLYCQLYHQLPPQDRFAWEIDV--NASGGMNGYIWLCERNGL-RSII 676
+V HPL+ I LY +L +DV G+ G L E L I+
Sbjct: 685 FVGKHHPLHDFILELYQTGSTEL---------VDVPPELCHGIQGKFSLDEEAVLPDQIV 735
Query: 677 PSPVKGLPDIERNQAM 692
SPV L D+ +N A+
Sbjct: 736 CSPVPMLRDLTQNTAI 751
>gi|432092124|gb|ELK24810.1| 5'-3' exoribonuclease 2 [Myotis davidii]
Length = 925
Score = 461 bits (1185), Expect = e-127, Method: Compositional matrix adjust.
Identities = 228/416 (54%), Positives = 297/416 (71%), Gaps = 3/416 (0%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPAF+RWL+ +YP IV+ VEE P+ + GV PVD SKPNPN +EFDNLYLDMNGII
Sbjct: 1 MGVPAFFRWLSRKYPSIIVNCVEEKPK-ECNGVKVPVDASKPNPNDVEFDNLYLDMNGII 59
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ KPAP + D++ +IF+YID +F +VRPR+LLY+AIDGVAPRAKMNQQR+RRF
Sbjct: 60 HPCTHPEDKPAPKNEDEMMVAIFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRF 119
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQ 180
RA+K+ EA E++R+R+E G L +E E DSN ITPGT+FM L+ L+Y+I
Sbjct: 120 RASKEGMEAAVEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIA 179
Query: 181 ARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
RLN PGW+ VILSDA+ PGEGEHKIM YIR QR P DPNT HCL G DADLIML
Sbjct: 180 DRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIML 239
Query: 241 SLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDT-PIHK 299
LATHE +F+I+RE P + + C +C Q GH +C G P + + + D+ P +
Sbjct: 240 GLATHEPNFTIIREEFK-PNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADSLPCAE 298
Query: 300 KKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREG 359
++ FL + VLREYL+ EL + + PF + ER +DD+VF+CFFVGNDFLPH+P+LEIREG
Sbjct: 299 GEFIFLRLNVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREG 358
Query: 360 AINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAY 415
AI+ L+++Y+ GGYLT++G V L RV+ + +V ED IF+KR + ++
Sbjct: 359 AIDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSF 414
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 92/185 (49%), Positives = 125/185 (67%), Gaps = 3/185 (1%)
Query: 442 DTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFY 501
D V+L E G+K+RYY +KF++ +E K ++ VV YVEGLCWV RYYYQ SW+W+Y
Sbjct: 506 DNVRLWEAGWKQRYYKNKFDVDAADE--KFRRKVVQSYVEGLCWVLRYYYQGCASWKWYY 563
Query: 502 PYHYAPFASDLKDLSDLEITFFLG-EPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSP 560
P+HYAPFASD + ++DL F G +PF+P +QLMG PAAS + LP +R LM+DP S
Sbjct: 564 PFHYAPFASDFEGIADLPSDFEKGTKPFKPLEQLMGVFPAASGNFLPPSWRKLMSDPDSS 623
Query: 561 IYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLL 620
I FYP DF ID+NGK++AWQGV LPF+DE+ L +++ LT EE + + +
Sbjct: 624 IIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEEKLYQTGSTEPV 683
Query: 621 YVHPQ 625
V P+
Sbjct: 684 DVPPE 688
>gi|300794747|ref|NP_001179401.1| 5'-3' exoribonuclease 2 [Bos taurus]
gi|296481414|tpg|DAA23529.1| TPA: 5'-3' exoribonuclease 2 [Bos taurus]
Length = 951
Score = 461 bits (1185), Expect = e-127, Method: Compositional matrix adjust.
Identities = 228/416 (54%), Positives = 298/416 (71%), Gaps = 3/416 (0%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPAF+RWL+ +YP IV+ VEE P+ + GV PVD SKPNPN +EFDNLYLDMNGII
Sbjct: 1 MGVPAFFRWLSRKYPSIIVNCVEEKPK-ECNGVKIPVDASKPNPNDVEFDNLYLDMNGII 59
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ KPAP + D++ +IF+YID +F +VRPR+LLY+AIDGVAPRAKMNQQR+RRF
Sbjct: 60 HPCTHPEDKPAPKNEDEMMVAIFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRF 119
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQ 180
RA+K+ EAE E++R+R+E G L +E E DSN ITPGT+FM L+ L+Y+I
Sbjct: 120 RASKEGMEAEIEKQRVREEILAKGGYLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIA 179
Query: 181 ARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
RLN PGW+ VILSDA+ PGEGEHKIM YIR QR P DPNT HCL G DADLIML
Sbjct: 180 DRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIML 239
Query: 241 SLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDT-PIHK 299
LATHE +F+I+RE P + + C +C Q GH +C G P + + + D+ P +
Sbjct: 240 GLATHEPNFTIIREEFK-PNKPKPCGLCNQFGHDVKDCEGLPREKKGKHDELADSLPCAE 298
Query: 300 KKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREG 359
++ F+ + VLREYL+ EL + + PF + ER +DD+VF+CFFVGNDFLPH+P+LEIREG
Sbjct: 299 GEFIFIRLSVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREG 358
Query: 360 AINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAY 415
AI+ L+++Y+ GGYLT++G V L RV+ + +V ED IF+KR + ++
Sbjct: 359 AIDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSF 414
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 100/192 (52%), Positives = 133/192 (69%), Gaps = 3/192 (1%)
Query: 442 DTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFY 501
D V+L E G+K+RYY +KF++ +E K ++ VV YVEGLCWV RYYYQ SW+W+Y
Sbjct: 507 DNVRLWEAGWKQRYYKNKFDVDAADE--KFRRKVVQSYVEGLCWVLRYYYQGCASWKWYY 564
Query: 502 PYHYAPFASDLKDLSDLEITFFLG-EPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSP 560
P+HYAPFASD + ++D+ F G +PF+P +QLMG PAAS + LP +R LM+DP S
Sbjct: 565 PFHYAPFASDFEGIADMPSDFEKGTKPFKPLEQLMGVFPAASGNFLPPSWRKLMSDPDSS 624
Query: 561 IYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLL 620
I FYP DF ID+NGKR+AWQGV LPF+DE+ L +++ LT EE RNS+ D+L
Sbjct: 625 IIDFYPEDFAIDLNGKRYAWQGVALLPFVDERRLRAALEEVYPDLTPEETRRNSLGGDVL 684
Query: 621 YVHPQHPLYQQI 632
+V HPL+ I
Sbjct: 685 FVGKHHPLHDFI 696
>gi|348581480|ref|XP_003476505.1| PREDICTED: 5'-3' exoribonuclease 2-like [Cavia porcellus]
Length = 950
Score = 461 bits (1185), Expect = e-127, Method: Compositional matrix adjust.
Identities = 228/416 (54%), Positives = 297/416 (71%), Gaps = 3/416 (0%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPAF+RWL+ +YP IV+ VEE P+ + GV PVD SKPNPN +EFDNLYLDMNGII
Sbjct: 1 MGVPAFFRWLSRKYPSIIVNCVEEKPK-ECNGVKVPVDASKPNPNDVEFDNLYLDMNGII 59
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ KPAP + D++ +IF+YID +F +VRPR+LLY+AIDGVAPRAKMNQQR+RRF
Sbjct: 60 HPCTHPEDKPAPKNEDEMMVAIFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRF 119
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQ 180
RA+K+ EA E++R+R+E G L +E E DSN ITPGT+FM L+ L+Y+I
Sbjct: 120 RASKEGMEAAVEKQRVREEILAKGGYLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIA 179
Query: 181 ARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
RLN PGW+ VILSDA+ PGEGEHKIM YIR QR P DPNT HCL G DADLIML
Sbjct: 180 DRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIML 239
Query: 241 SLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDT-PIHK 299
LATHE +F+I+RE P + + C +C Q GH +C G P + + + D+ P +
Sbjct: 240 GLATHEPNFTIIREEFK-PNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADSLPCAE 298
Query: 300 KKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREG 359
++ FL + VLREYL+ EL + + PF + ER +DD+VF+CFFVGNDFLPH+P+LEIREG
Sbjct: 299 GEFIFLRLNVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREG 358
Query: 360 AINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAY 415
AI+ L+++Y+ GGYLT++G V L RV+ + +V ED IF+KR + ++
Sbjct: 359 AIDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSF 414
Score = 208 bits (529), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 114/255 (44%), Positives = 157/255 (61%), Gaps = 14/255 (5%)
Query: 442 DTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFY 501
D V+L E G+K+RYY +KF++ +E K ++ VV YVEGLCWV RYYYQ SW+W+Y
Sbjct: 507 DNVRLWEAGWKQRYYKNKFDVDAADE--KFRRKVVQSYVEGLCWVLRYYYQGCASWKWYY 564
Query: 502 PYHYAPFASDLKDLSDLEITFFLG-EPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSP 560
P+HYAPFASD + ++D+ F G +PF+P +QLMG PAAS + LP +R LM+DP S
Sbjct: 565 PFHYAPFASDFEGIADMPSDFEKGTKPFKPLEQLMGVFPAASGNFLPPSWRKLMSDPDSS 624
Query: 561 IYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLL 620
I FYP DF ID+NGK++AWQGV LPF+DE+ L +++ LT EE RNS+ D+L
Sbjct: 625 IIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEENRRNSLGGDVL 684
Query: 621 YVHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDV--NASGGMNGYIWLCERNGL-RSIIP 677
+V HPL+ I+ + P +DV G+ G L E L ++
Sbjct: 685 FVGKHHPLHDFISELYRTGSTEP--------VDVPPELCHGIQGKFSLDEEAILPDQVVC 736
Query: 678 SPVKGLPDIERNQAM 692
SPV L D+ +N A+
Sbjct: 737 SPVPMLRDLAQNTAI 751
>gi|340714666|ref|XP_003395847.1| PREDICTED: 5'-3' exoribonuclease 2 homolog [Bombus terrestris]
Length = 946
Score = 460 bits (1184), Expect = e-126, Method: Compositional matrix adjust.
Identities = 233/425 (54%), Positives = 303/425 (71%), Gaps = 11/425 (2%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPAF+RWL+ +YP IV+ +E+ P + GV PV+ PNPNG+EFDNLYLDMNGII
Sbjct: 1 MGVPAFFRWLSRKYPSIIVECIEQKP-ITTNGVRVPVNSVDPNPNGIEFDNLYLDMNGII 59
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ KPAP + +++ ++IF+ ID +F +VRPRKLLY+AIDGVAPRAKMNQQR+RRF
Sbjct: 60 HPCTHPEDKPAPKNEEEMMEAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
Query: 121 RAAKDAAEAEAEEERLRKEFEEAG-KLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFI 179
RA+K+ E E +R+R E G L K K + DSN ITPGT FMA LS L Y+I
Sbjct: 120 RASKETIEKVNEIKRIRSELILKGVSLPPEKPKEDHFDSNCITPGTPFMARLSKCLHYYI 179
Query: 180 QARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIM 239
RLN PGW+ KVILSDANVPGEGEHKIM +IR QR P DPNT+H L G DADLIM
Sbjct: 180 HDRLNNDPGWRNIKVILSDANVPGEGEHKIMDFIRKQRAQPDHDPNTQHVLCGADADLIM 239
Query: 240 LSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIHK 299
L LATHE +F+I+RE P + + C +CGQ+GH +C G A+ N D+T
Sbjct: 240 LGLATHEPNFTIIREEFK-PNKPKPCDICGQLGHEMQDCTG------AEANQGDETDTFG 292
Query: 300 K--KYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIR 357
+Y F+ + VLREYL+ EL +PN PF +FER++DD+VF+CFFVGNDFLPH+P+LEIR
Sbjct: 293 SECQYIFVRLNVLREYLERELQMPNLPFKYDFERVIDDWVFMCFFVGNDFLPHLPSLEIR 352
Query: 358 EGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYEY 417
EGAI+ L+++Y++ GG+LTD+G+V LDRV+ + + ED+IF++R + + AY+
Sbjct: 353 EGAIDRLVNLYKKAVYKTGGFLTDSGDVNLDRVQLIMSELGEVEDEIFKRRQQNELAYKQ 412
Query: 418 NEAMK 422
E K
Sbjct: 413 REKDK 417
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 118/270 (43%), Positives = 153/270 (56%), Gaps = 13/270 (4%)
Query: 418 NEAMKLNARRESSEELLQAPVAVADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVL 477
N ++ RR E V D V+L E G+K+RYY KF++S P+ + + +V L
Sbjct: 485 NSTNQITKRRREPVEDDSDDDQVHDEVRLWEDGFKDRYYESKFDVS-PDNL-AFRNNVAL 542
Query: 478 KYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDLEITFFLGE-PFRPFDQLMG 536
+YV GLCWV RYYYQ SW+W++PYHYAPFASD ++ L F G PFRP +QLMG
Sbjct: 543 QYVRGLCWVLRYYYQGCASWKWYFPYHYAPFASDFINIGGLSTEFEKGTTPFRPLEQLMG 602
Query: 537 TLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLR 596
PAASS +P + LM DP SPI FYP DF+ID+NGK+FAWQG+ LPF+DEK L +
Sbjct: 603 VFPAASSKHIPAPWAKLMIDPRSPIIDFYPEDFKIDLNGKKFAWQGIALLPFVDEKRLFK 662
Query: 597 QTKKLEVFLTEEELFRNSVMLDLLYVHPQHPLYQQIT-LYCQLYHQLPPQDRFAWEIDVN 655
+ LTE E RN + LYV + Y I LY H L F E +
Sbjct: 663 ALEPYYDCLTEAEKKRNVEGDNRLYVGLGNSGYNFIKGLYTN--HVL-----FDAETQI- 714
Query: 656 ASGGMNGYIWLCERN-GLRSIIPSPVKGLP 684
M G + L + G + +PSP+ GLP
Sbjct: 715 CIDNMRGIVLLADDCVGDGATLPSPINGLP 744
>gi|335304534|ref|XP_003134355.2| PREDICTED: 5'-3' exoribonuclease 2 [Sus scrofa]
Length = 950
Score = 460 bits (1184), Expect = e-126, Method: Compositional matrix adjust.
Identities = 228/416 (54%), Positives = 297/416 (71%), Gaps = 3/416 (0%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPAF+RWL+ +YP IV+ VEE P+ + GV PVD SKPNPN +EFDNLYLDMNGII
Sbjct: 1 MGVPAFFRWLSRKYPSIIVNCVEEKPK-ECNGVKIPVDASKPNPNDVEFDNLYLDMNGII 59
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ KPAP + D++ +IF+YID +F +VRPR+LLY+AIDGVAPRAKMNQQR+RRF
Sbjct: 60 HPCTHPEDKPAPKNEDEMMVAIFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRF 119
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQ 180
RA+K+ EA E++R+R+E G L +E E DSN ITPGT+FM L+ L+Y+I
Sbjct: 120 RASKEGMEAAVEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIA 179
Query: 181 ARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
RLN PGW+ VILSDA+ PGEGEHKIM YIR QR P DPNT HCL G DADLIML
Sbjct: 180 DRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIML 239
Query: 241 SLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDT-PIHK 299
LATHE +F+I+RE P + + C +C Q GH +C G P + + + D+ P +
Sbjct: 240 GLATHEPNFTIIREEFK-PNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADSLPSAE 298
Query: 300 KKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREG 359
++ FL + VLREYL+ EL + + PF + ER +DD+VF+CFFVGNDFLPH+P+LEIREG
Sbjct: 299 GEFIFLRLSVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREG 358
Query: 360 AINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAY 415
AI+ L+++Y+ GGYLT++G V L RV+ + +V ED IF+KR + ++
Sbjct: 359 AIDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSF 414
Score = 206 bits (525), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 98/189 (51%), Positives = 132/189 (69%), Gaps = 3/189 (1%)
Query: 442 DTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFY 501
D V+L E G+K+RYY +KF++ +E K ++ VV YVEGLCWV RYYYQ SW+W+Y
Sbjct: 507 DNVRLWEAGWKQRYYKNKFDVDAADE--KFRRKVVQSYVEGLCWVLRYYYQGCASWKWYY 564
Query: 502 PYHYAPFASDLKDLSDLEITFFLG-EPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSP 560
P+HYAPFASD + ++D+ F G +PF+P +QLMG PAAS + LP +R LM+DP S
Sbjct: 565 PFHYAPFASDFEGIADMPSDFEKGTKPFKPLEQLMGVFPAASGNFLPPSWRKLMSDPDSS 624
Query: 561 IYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLL 620
I FYP DF ID+NGK++AWQGV LPF+DE+ L +++ LT EE RNS+ D+L
Sbjct: 625 IIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEETRRNSLGGDVL 684
Query: 621 YVHPQHPLY 629
+V HPL+
Sbjct: 685 FVGKHHPLH 693
>gi|327270678|ref|XP_003220116.1| PREDICTED: 5'-3' exoribonuclease 2-like [Anolis carolinensis]
Length = 957
Score = 460 bits (1183), Expect = e-126, Method: Compositional matrix adjust.
Identities = 225/409 (55%), Positives = 292/409 (71%), Gaps = 3/409 (0%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPAF+RWL+ +YP IV EE P+ + GV PVD SKPNPN +EFDNLYLDMNGII
Sbjct: 1 MGVPAFFRWLSRKYPSIIVSCTEEKPK-ECNGVKIPVDTSKPNPNEVEFDNLYLDMNGII 59
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ KPAP + D++ +IF+YID +F +VRPR+LLY+AIDGVAPRAKMNQQR+RRF
Sbjct: 60 HPCTHPEDKPAPKNEDEMMVAIFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRF 119
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQ 180
RA+K+ E E++R+R+E G L +E E DSN ITPGT+FM L+ L+Y++
Sbjct: 120 RASKEGVEGAEEKQRIREEIMRKGGFLPPEEVKERFDSNCITPGTEFMDNLAKCLRYYVA 179
Query: 181 ARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
RLN PGW+ VILSDA+ PGEGEHKIM YIR QR P DPNT HCL G DADLIML
Sbjct: 180 DRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIML 239
Query: 241 SLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH-K 299
LATHE +F+I+RE P + + C +CGQ GH EC G P + + + D+P +
Sbjct: 240 GLATHEPNFTIIREEFK-PNKPKPCGLCGQFGHEVKECQGLPKEKQGEHDQFADSPPGME 298
Query: 300 KKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREG 359
+++ F+ + VL+EYL+ EL + + PF + ER +DD+VF+CFFVGNDFLPH+P+LEIREG
Sbjct: 299 QEFIFIRLCVLKEYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREG 358
Query: 360 AINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKR 408
AI+ L+++Y+ GGYLT+ G V L RV+ + +V ED IF+KR
Sbjct: 359 AIDRLVNIYKNVVHKTGGYLTENGYVNLQRVQMIMLAVGEVEDSIFKKR 407
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 113/253 (44%), Positives = 154/253 (60%), Gaps = 10/253 (3%)
Query: 442 DTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFY 501
D V+L E G+K+RYY +KF++ ++ K + VV YVEGLCWV RYYYQ SW+W+Y
Sbjct: 508 DNVRLWEAGWKQRYYKNKFDVDVNDK--KFRHKVVQSYVEGLCWVLRYYYQGCASWKWYY 565
Query: 502 PYHYAPFASDLKDLSDLEITFFLG-EPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSP 560
P+HYAPFASD + ++D+ F G +PF+P +QLMG PAAS + LP +R LMTDP S
Sbjct: 566 PFHYAPFASDFEGIADMFSDFEKGTKPFKPLEQLMGVFPAASGNFLPVTWRKLMTDPESS 625
Query: 561 IYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLL 620
I FYP DF ID+NGK++AWQGV LPF+DE+ L ++ LT EE RNS+ D+L
Sbjct: 626 IIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALAEVYPDLTPEEKRRNSLGGDVL 685
Query: 621 YVHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVNASGGMNGYIWLCERNGL-RSIIPSP 679
+V HPL+ I Q ++ A + G+ G + L E L + SP
Sbjct: 686 FVGKHHPLHDFI------LEQYKSDEKQAVGMPPELCHGIQGKLTLNENPVLPDETVHSP 739
Query: 680 VKGLPDIERNQAM 692
V L D+ +N A+
Sbjct: 740 VPVLRDLTQNTAI 752
>gi|326914793|ref|XP_003203707.1| PREDICTED: 5'-3' exoribonuclease 2-like [Meleagris gallopavo]
Length = 985
Score = 459 bits (1182), Expect = e-126, Method: Compositional matrix adjust.
Identities = 225/409 (55%), Positives = 294/409 (71%), Gaps = 2/409 (0%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPAF+RWL+ +YP IV+ VE + + GV VD S+PNPN +EFDNLYLDMNGII
Sbjct: 1 MGVPAFFRWLSRKYPSIIVNRVEGERAKECNGVKASVDTSRPNPNEVEFDNLYLDMNGII 60
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ KPAP + D++ +IF+YID IF +VRPR+LLY+AIDGVAPRAKMNQQR+RRF
Sbjct: 61 HPCTHPEDKPAPKNEDEMMVAIFEYIDRIFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRF 120
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQ 180
RA+K+ EA E++++R+E G +L +E E DSN ITPGT+FM L+ L+Y+I
Sbjct: 121 RASKEGMEAAEEKQKIRQEILAKGGILPPEEVKERFDSNCITPGTEFMDNLAKCLRYYIA 180
Query: 181 ARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
RLN PGW+ VILSDA+ PGEGEHKIM YIR QR P DPNT HCL G DADLIML
Sbjct: 181 DRLNSDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIML 240
Query: 241 SLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDT-PIHK 299
LATHE +F+I+RE P + + C +C Q+GH +C G P + + D+ P +
Sbjct: 241 GLATHEPNFTIIREEFK-PNKPKPCALCNQMGHEVKDCQGLPREKQGKHDQFADSLPASE 299
Query: 300 KKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREG 359
+++ F+ + VLREYL+ EL + + PF +FER VDD+VF+CFFVGNDFLPH+P+LEIREG
Sbjct: 300 QEFIFIRLCVLREYLERELTMASLPFTFDFERSVDDWVFMCFFVGNDFLPHLPSLEIREG 359
Query: 360 AINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKR 408
AI+ L+++Y+ GGYLT++G V L RV+ + +V ED IF+KR
Sbjct: 360 AIDRLVNIYKNVVHKTGGYLTESGFVNLQRVQMIMLAVGEVEDSIFKKR 408
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 112/253 (44%), Positives = 154/253 (60%), Gaps = 10/253 (3%)
Query: 442 DTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFY 501
D ++L E G+K+RYY +KF++ +E K ++ VV YVEGLCWV RYYYQ SW W+Y
Sbjct: 507 DNIRLWESGWKQRYYKNKFDVDASDE--KFRRKVVQSYVEGLCWVLRYYYQGCASWNWYY 564
Query: 502 PYHYAPFASDLKDLSDLEITFFLG-EPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSP 560
P+HYAPFASD + ++D+ F G +PF+P +QLMG PAAS + LP +R LMTDP S
Sbjct: 565 PFHYAPFASDFEGIADMPSDFEKGSKPFKPLEQLMGVFPAASGNFLPPTWRKLMTDPESS 624
Query: 561 IYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLL 620
I FYP DF ID+NGK++AWQGV LPF+DE+ L +++ LT EE RNS+ D+L
Sbjct: 625 IIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEENRRNSLGGDVL 684
Query: 621 YVHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVNASGGMNGYIWLCERNGL-RSIIPSP 679
+V HPL I Q ++ ++ G+ G + L E L + SP
Sbjct: 685 FVGKHHPLCDFIV------EQYKSKNTEPVDMPPELCYGIQGKLTLNENAVLPDKTVESP 738
Query: 680 VKGLPDIERNQAM 692
V L D+ +N A+
Sbjct: 739 VPMLRDLTQNSAV 751
>gi|154413474|ref|XP_001579767.1| XRN 5'-3' exonuclease N-terminus family protein [Trichomonas
vaginalis G3]
gi|121913977|gb|EAY18781.1| XRN 5'-3' exonuclease N-terminus family protein [Trichomonas
vaginalis G3]
Length = 710
Score = 459 bits (1182), Expect = e-126, Method: Compositional matrix adjust.
Identities = 281/677 (41%), Positives = 373/677 (55%), Gaps = 85/677 (12%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNG-MEFDNLYLDMNGI 59
MGVP+F+RWL +YPL + V+E D VD P++ S PN G EFDNLY+DMNG+
Sbjct: 1 MGVPSFFRWLQRKYPLVVSRVLESDVDVD------PLE-SNPNTIGSQEFDNLYIDMNGL 53
Query: 60 IHPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRR 119
IH CFHP + P + ++V+++I Y+ IF +VRPRKLLYLAIDGVAPRAKMNQQR+RR
Sbjct: 54 IHSCFHPADREQPKNIEEVYENIKLYLKRIFNIVRPRKLLYLAIDGVAPRAKMNQQRSRR 113
Query: 120 FRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETC--------DSNVITPGTQFMAVL 171
FRAAKD+ E K F+E L KE + DSN+ITPGT+FM L
Sbjct: 114 FRAAKDS------EYNRNKNFQELITLGKQKEAEKIMKEQYIQDHDSNIITPGTKFMCDL 167
Query: 172 SAALQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLY 231
S L+ FI N P W +ILSDA+VPGEGEHKIM +IR+QR G++PNTRH +Y
Sbjct: 168 SQILRSFISEMQNTSPAWSNIAIILSDASVPGEGEHKIMEFIRIQRLTDGYNPNTRHVMY 227
Query: 232 GLDADLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNG 291
GLDADLI L+LA+HE++FSILRE I +
Sbjct: 228 GLDADLIFLALASHEVYFSILRENIFDKKE------------------------------ 257
Query: 292 VDDTPIHKKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHM 351
+D PI + F NI+VLR+YL EL I + F + ER++DD VFLCF GNDFLP +
Sbjct: 258 -NDKPIGPSSFIFANIFVLRQYLDRELQI-DVKFGWDLERVIDDIVFLCFAAGNDFLPQI 315
Query: 352 PTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQ----IFQK 407
P EI G ++ L Y++ + Y+T+ G+V + + F+ E + I
Sbjct: 316 PGFEIPRGFVDQLFERYKKLLPQLSSYITNTGDVEMKNLLPFMLGFDYLEPESVHNIVSP 375
Query: 408 RTRIQQAYEYNEAM----KLNARRESSEELLQAP-------VAVADTVKLGEPGYKERYY 456
R EY + K + E+ ++L+ A + + DT + K+ YY
Sbjct: 376 SERSISVSEYVNNLCNDVKTEYKPENDKKLVTAKFQKNQNNLEIYDTKR-----DKKFYY 430
Query: 457 ADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLS 516
KF + E I K+VV +Y +G+ WV +YY + V SW WFYPYH AP SD L
Sbjct: 431 QSKFGFEDEENI----KNVVHEYCKGMEWVLKYYTKGVASWSWFYPYHSAPLVSDFVLLD 486
Query: 517 -DLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNG 575
D++ F LG PF P QLM LP SS LP+ +LM SPI FYP F++D+ G
Sbjct: 487 CDVKNEFVLGHPFTPLQQLMAVLPPQSSWCLPKMMCDLMNSDDSPILDFYPKKFKVDLEG 546
Query: 576 KRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVHPQH-PLYQQITL 634
AW+G V +PFID L + + + L EEE RNS + LY Q + IT
Sbjct: 547 GTTAWKGHVLIPFIDAHKLKKCLRNVNDSLNEEEKQRNSFGVTFLYNKLQKVTILGTITE 606
Query: 635 YCQLY-----HQLPPQD 646
Y + Y ++LPP D
Sbjct: 607 YSEGYENECIYELPPYD 623
>gi|410916005|ref|XP_003971477.1| PREDICTED: 5'-3' exoribonuclease 2-like [Takifugu rubripes]
Length = 992
Score = 459 bits (1180), Expect = e-126, Method: Compositional matrix adjust.
Identities = 226/416 (54%), Positives = 297/416 (71%), Gaps = 3/416 (0%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPAF+RWL+ +YP IV VEE + + GV PVD ++PNPN +EFDNLYLDMNGII
Sbjct: 1 MGVPAFFRWLSRKYPSIIVHCVEEKGK-ECNGVRIPVDTTRPNPNEVEFDNLYLDMNGII 59
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ K AP + D++ +IF+YID +F +VRPR++LY+AIDGVAPRAKMNQQR+RRF
Sbjct: 60 HPCTHPEDKAAPKNEDEMMVAIFEYIDRLFNIVRPRRVLYMAIDGVAPRAKMNQQRSRRF 119
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQ 180
RA+K+ AE +++R+R+E + G L +E E DSN ITPGT+FM L+ L+Y+I
Sbjct: 120 RASKEGAELVEDKKRIREEVIQRGGYLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIA 179
Query: 181 ARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
RLN PGW+ V LSDA+VPGEGEHKIM +IR QR P DPNT HCL G DADLIML
Sbjct: 180 DRLNNNPGWRNVTVFLSDASVPGEGEHKIMDFIRRQRAQPNHDPNTHHCLCGADADLIML 239
Query: 241 SLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNG-VDDTPIHK 299
LATHE +F+I+RE P + C +CGQ+GH +C G + + + D P+ +
Sbjct: 240 GLATHEPNFTIIREEFK-PNKPRPCALCGQLGHDIKDCQGTAREKQGEHDEFADSMPVSE 298
Query: 300 KKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREG 359
+++ F+ + VLREYL EL + + PFP +FER VDD+VF+CFFVGNDFLPH+P+LEIREG
Sbjct: 299 QEFIFIRLCVLREYLARELTMASLPFPFDFERSVDDWVFMCFFVGNDFLPHLPSLEIREG 358
Query: 360 AINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAY 415
AI+ L+ +Y+ GGYLT+ G V L+RVE +Q+V V ED IF+KR + +
Sbjct: 359 AIDRLVGIYKDVVHKTGGYLTENGYVKLERVELIMQAVGVAEDNIFKKRKEDDEGF 414
Score = 202 bits (513), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 111/253 (43%), Positives = 153/253 (60%), Gaps = 10/253 (3%)
Query: 442 DTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFY 501
D V+L E G+K+RYY +KF++ +E +K VV YVEGLCWV RYYYQ SW+W++
Sbjct: 520 DNVRLWEEGWKQRYYKNKFDVDVMDE--DFRKKVVQSYVEGLCWVLRYYYQGCASWKWYF 577
Query: 502 PYHYAPFASDLKDLSDLEITFFLG-EPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSP 560
P+HYAPFASD KD+ + F +PF+P +QLM PAAS + LPE +RNLM+ P S
Sbjct: 578 PFHYAPFASDFKDIKGMFTDFEKDTKPFQPLEQLMSVFPAASGNFLPETWRNLMSSPDSS 637
Query: 561 IYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLL 620
I FYP DF ID+NGK++AWQGV LPF+DE+ L + LT EE+ RNS+ D +
Sbjct: 638 IIDFYPDDFAIDLNGKKYAWQGVALLPFVDERRLRAALADVYPDLTPEEVKRNSLGSDFI 697
Query: 621 YVHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVNASGGMNGYIWLCERNGL-RSIIPSP 679
++ HPLY I +LY + EI + G+ G + L + L + SP
Sbjct: 698 FLGKAHPLYDFIQ---ELYRTEATE---GTEIPADLCHGIQGTLNLDDDPILPDKAVMSP 751
Query: 680 VKGLPDIERNQAM 692
+ L DI +N ++
Sbjct: 752 IPTLRDITQNNSV 764
>gi|126303629|ref|XP_001373979.1| PREDICTED: 5'-3' exoribonuclease 2 [Monodelphis domestica]
Length = 947
Score = 459 bits (1180), Expect = e-126, Method: Compositional matrix adjust.
Identities = 224/416 (53%), Positives = 300/416 (72%), Gaps = 3/416 (0%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPAF+RWL+ +YP IV+ VEE P+ + GV PVD SKPNPN +EFDNLYLDMNGII
Sbjct: 1 MGVPAFFRWLSRKYPSIIVNCVEEKPK-ECNGVKIPVDTSKPNPNEVEFDNLYLDMNGII 59
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ KPAP + D++ +IF+YID +F +VRPR+LLY+AIDGVAPRAKMNQQR+RRF
Sbjct: 60 HPCTHPEDKPAPKNEDEMMVAIFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRF 119
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQ 180
RA+K+ E+ E++R+R+E G L +E E DSN ITPGT+FM L+ L+Y+I
Sbjct: 120 RASKEGMESTIEKQRVREEILSKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIA 179
Query: 181 ARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
RLN PGW+ VILSDA+ PGEGEHKIM YIR QR P DPNT HCL G DADLIML
Sbjct: 180 DRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIML 239
Query: 241 SLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDT-PIHK 299
LATHE +F+I+RE P + + C +C Q+GH +C G P + + + +++ P +
Sbjct: 240 GLATHEPNFTIIREEFK-PNKPKPCGLCNQLGHEVKDCQGLPREKQGEHDQFEESLPASE 298
Query: 300 KKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREG 359
++ ++ + VLREYL+ EL + + PF + ER +DD+VF+CFFVGNDFLPH+P+LEIREG
Sbjct: 299 GEFIYIRLNVLREYLERELTMASLPFTFDIERSIDDWVFMCFFVGNDFLPHLPSLEIREG 358
Query: 360 AINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAY 415
AI+ L+++Y+ GGYLT++G V L RV+ + +V ED IF+KR ++++
Sbjct: 359 AIDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEESF 414
Score = 204 bits (520), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 111/253 (43%), Positives = 155/253 (61%), Gaps = 10/253 (3%)
Query: 442 DTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFY 501
D V+L E G+K+RYY +KF++ + DK ++ VV YVEGLCWV RYYYQ SW+W+Y
Sbjct: 507 DNVRLWESGWKQRYYKNKFDVDAAD--DKFRRKVVQSYVEGLCWVLRYYYQGCASWKWYY 564
Query: 502 PYHYAPFASDLKDLSDLEITFFLG-EPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSP 560
P+HYAPFASD ++D+ F G PF+P +QLMG PAAS + LP +R LM+DP S
Sbjct: 565 PFHYAPFASDFDGIADMPSDFEKGTRPFKPLEQLMGVFPAASGNFLPPSWRKLMSDPESS 624
Query: 561 IYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLL 620
I FYP DF ID+NGK++AWQGV LPF+DE+ L +++ LT +E RNS+ D++
Sbjct: 625 IIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPDETRRNSLGGDVM 684
Query: 621 YVHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVNASGGMNGYIWLCERNGL-RSIIPSP 679
+V HPL +LY + A ++ G+ G + L + L I+ SP
Sbjct: 685 FVGKHHPL---CDFLSELYKTGSTE---AVDLPPELCHGIQGKLTLHKEAILPDQIVYSP 738
Query: 680 VKGLPDIERNQAM 692
V L D+ +N A+
Sbjct: 739 VPVLRDLTQNTAI 751
>gi|1060921|dbj|BAA07524.1| Dhm1 protein [Mus musculus]
Length = 947
Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust.
Identities = 228/416 (54%), Positives = 294/416 (70%), Gaps = 3/416 (0%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPAF+RWL+ +YP IV+ VEE P+ + GV PVD SKPNPN +EFDNLYLDMNGII
Sbjct: 1 MGVPAFFRWLSRKYPSIIVNCVEEKPK-ECNGVKIPVDASKPNPNDVEFDNLYLDMNGII 59
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ KPAP + D++ +IF+YID +F +VRPR+LLY+AIDGVAPRAKMNQQR+RRF
Sbjct: 60 HPCTHPEDKPAPKNEDEMMVAIFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRF 119
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQ 180
RA K EA E++R+R+E G L +E E DSN ITPGT+FM L+ L+Y+I
Sbjct: 120 RAIKGGMEAAVEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIA 179
Query: 181 ARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
RLN PGW+ VILSDA+ PGEGEHKIM YIR QR P DPNT HCL G DADLIML
Sbjct: 180 DRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNQDPNTHHCLCGADADLIML 239
Query: 241 SLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDT-PIHK 299
LATHE +F+I+RE P + + C +C Q GH +C G P + + + D+ P +
Sbjct: 240 GLATHEPNFTIIREEFK-PNKPKPCALCNQFGHEVKDCEGLPREKKGKHDELADSLPCAE 298
Query: 300 KKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREG 359
++ FL + VLREYL+ EL + + PFP + ER DD+ F+CFFVGNDFLPH+P+LEIREG
Sbjct: 299 GEFIFLRLNVLREYLERELTMASLPFPFDVERSNDDWEFMCFFVGNDFLPHLPSLEIREG 358
Query: 360 AINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAY 415
AI+ L+++Y+ GGYLT++G V L RV+ + +V ED IF+KR + ++
Sbjct: 359 AIDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSF 414
Score = 204 bits (520), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 115/255 (45%), Positives = 153/255 (60%), Gaps = 14/255 (5%)
Query: 442 DTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFY 501
D V+L E G+K+RYY +KF++ +E K ++ VV YVEGLCWV RYYYQ SW+W Y
Sbjct: 507 DNVRLWEAGWKQRYYKNKFDVDAADE--KFRRKVVQSYVEGLCWVLRYYYQGCASWKWLY 564
Query: 502 PYHYAPFASDLKDLSDLEITFFLG-EPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSP 560
P+HYAPFASD + ++D+ F G +PF+P +QLMG PAAS + LP +R LM+DP S
Sbjct: 565 PFHYAPFASDFEGIADMSSEFEKGTKPFKPLEQLMGVFPAASGNFLPPTWRKLMSDPDSS 624
Query: 561 IYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLL 620
I FYP DF ID+NGK++AWQGV LPF+DE+ L +++ LT EE RNS+ D+L
Sbjct: 625 IIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEENRRNSLGGDVL 684
Query: 621 YVHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDV--NASGGMNGYIWLCERNGL-RSIIP 677
+V HPL I Q P +DV G+ G L E L +
Sbjct: 685 FVGKLHPLRDFILELYQTGSTEP--------VDVPPELCHGIQGTFSLDEEAILPDQTVC 736
Query: 678 SPVKGLPDIERNQAM 692
SPV L D+ +N A+
Sbjct: 737 SPVPMLRDLTQNTAV 751
>gi|405969602|gb|EKC34564.1| 5'-3' exoribonuclease 2 [Crassostrea gigas]
Length = 954
Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust.
Identities = 237/445 (53%), Positives = 303/445 (68%), Gaps = 9/445 (2%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPAF+RWL+ + P +V +EE P+ + GV PVD S+PNPN EFDNLYLDMNGII
Sbjct: 1 MGVPAFFRWLSRKNPSILVHCIEEKPR-EVNGVKIPVDTSQPNPNDYEFDNLYLDMNGII 59
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ KPAP + D++ IF+YID IF +VRPRK+LY+AIDGVAPRAKMNQQR+RRF
Sbjct: 60 HPCCHPEDKPAPKNEDEMMILIFEYIDRIFSIVRPRKVLYMAIDGVAPRAKMNQQRSRRF 119
Query: 121 RAAKDAAEAEAEEERLRKEFEEAG-KLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFI 179
RA+K+ E E RLR E G L KEK E DSN ITPGT FM L+ L+Y+I
Sbjct: 120 RASKETKEKIEEMSRLRDELTTKGFNLPPEKEKGEHFDSNCITPGTPFMFRLADCLRYYI 179
Query: 180 QARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIM 239
RLN PGWQ K+ILSDANVPGEGEHKIM YIR QR P DPNT+HCL G DADL+M
Sbjct: 180 HERLNNDPGWQNIKIILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTKHCLCGADADLLM 239
Query: 240 LSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIHK 299
L LATHE HF+I+RE P Q C +CGQ+GH EC G P + + + + +
Sbjct: 240 LGLATHEPHFTIIREEFK-PNQPRPCDLCGQLGHEMKECMGLPKEMCGENDELPKVMGAE 298
Query: 300 KKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREG 359
+++ F+ + +LREYL+ EL + N PF +FER +DD+VF+CFFVGNDFLPH+P+LEIREG
Sbjct: 299 QEFIFIRLNILREYLERELLMDNLPFKYDFERAIDDWVFMCFFVGNDFLPHLPSLEIREG 358
Query: 360 AINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYEYNE 419
AI+ L+ +Y+ GGYLT++G V L+RV+ + + ED+IF++R + E+
Sbjct: 359 AIDRLVKLYKSCVRRTGGYLTNSGVVNLERVQVVMSDLGEVEDEIFKRRRDTE--LEFRR 416
Query: 420 AMKLNARRESSEELL----QAPVAV 440
K RE + L +APV +
Sbjct: 417 RNKQRKEREKRVQFLLSFNRAPVMI 441
Score = 208 bits (530), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 112/254 (44%), Positives = 155/254 (61%), Gaps = 9/254 (3%)
Query: 441 ADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWF 500
AD V+L E G+K+RYY+ KF + ++ + ++ V YV GLCWV RYYYQ SW+W+
Sbjct: 542 ADEVRLWEDGWKDRYYSSKFGVDGSDQ--EFRQTVANHYVRGLCWVLRYYYQGCASWKWY 599
Query: 501 YPYHYAPFASDLKDLSDLEITFFLGE-PFRPFDQLMGTLPAASSSALPEKYRNLMTDPSS 559
+PYHYAPFASD ++ L +F PFRP +QLMG PAAS LP ++ LM DP S
Sbjct: 600 FPYHYAPFASDFVNIGQLSNSFEKQTVPFRPLEQLMGVFPAASKKHLPVTWQRLMCDPES 659
Query: 560 PIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDL 619
PI FYP DF+ID+NGK++AWQGV LPF+DEK LL +K+ LT+ E RN+ D
Sbjct: 660 PIIDFYPIDFKIDLNGKKYAWQGVALLPFVDEKRLLSALEKVYPDLTDAERERNTWGSDR 719
Query: 620 LYVHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVNASGGMNGYIWLCERNGLR-SIIPS 678
L+V +HP Y + + LY ++ ++D + GM G +W +R L + S
Sbjct: 720 LFVGIRHPSY---SFFEGLYEGELTKE--GVKVDPKNAEGMGGLVWADQRATLTGGTVES 774
Query: 679 PVKGLPDIERNQAM 692
P+K L I N+A+
Sbjct: 775 PLKELQPITDNRAL 788
>gi|224047545|ref|XP_002199834.1| PREDICTED: 5'-3' exoribonuclease 2 [Taeniopygia guttata]
Length = 949
Score = 457 bits (1176), Expect = e-126, Method: Compositional matrix adjust.
Identities = 225/409 (55%), Positives = 294/409 (71%), Gaps = 3/409 (0%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPAF+RWL+ +YP IV+ VEE + + GV P+D SKPNPN +EFDNLYLDMNGII
Sbjct: 1 MGVPAFFRWLSRKYPSIIVNCVEEKAK-ECNGVKVPIDTSKPNPNEVEFDNLYLDMNGII 59
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ KPAP + D++ +IF+YID IF +VR R+LLY+AID APRAKMNQQR+RRF
Sbjct: 60 HPCTHPEDKPAPKNEDEMMVAIFEYIDRIFNIVRQRRLLYMAIDXXAPRAKMNQQRSRRF 119
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQ 180
RA+K+ EA E++++R+E G L +E E DSN ITPGT+FM L+ L+Y+I
Sbjct: 120 RASKEGMEAAEEKQKIRQEILAKGGYLPPEEVKERFDSNCITPGTEFMDNLAKCLRYYIA 179
Query: 181 ARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
RLN PGW+ VILSDA+ PGEGEHKIM YIR QR P DPNT HCL G DADLIML
Sbjct: 180 DRLNSNPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIML 239
Query: 241 SLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDT-PIHK 299
LATHE++F+I+RE P + + C +C Q+GH +C G P + + DT P+ +
Sbjct: 240 GLATHELNFTIIREEFK-PNKPKPCALCNQMGHEVKDCQGLPREKQGKHDQFADTLPVSE 298
Query: 300 KKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREG 359
+++ F+ + VLREYL+ EL + + PF +FER VDD+VF+CFFVGNDFLPH+P+LEIREG
Sbjct: 299 QEFIFIRLCVLREYLERELTMASLPFTFDFERSVDDWVFMCFFVGNDFLPHLPSLEIREG 358
Query: 360 AINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKR 408
AI+ L+++Y+ GGYLT++G V L RV+ + +V ED IF+KR
Sbjct: 359 AIDRLVNIYKNVVHKTGGYLTESGFVNLQRVQMIMLAVGEVEDSIFKKR 407
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 113/253 (44%), Positives = 155/253 (61%), Gaps = 10/253 (3%)
Query: 442 DTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFY 501
D ++L E G+K+RYY +KF++ +E K ++ VV YVEGLCWV RYYYQ SW W+Y
Sbjct: 507 DNIRLWETGWKQRYYKNKFDVDASDE--KFRRKVVQSYVEGLCWVLRYYYQGCASWNWYY 564
Query: 502 PYHYAPFASDLKDLSDLEITFFLG-EPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSP 560
P+HYAPFASD + ++D+ F G +PF+P +QLMG PAAS + LP +R LMTDP S
Sbjct: 565 PFHYAPFASDFEGIADMPSDFEKGSKPFKPLEQLMGVFPAASGNFLPPTWRKLMTDPESS 624
Query: 561 IYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLL 620
I FYP DF ID+NGK++AWQGV LPF+DE+ L +++ LT EE RNS+ D+L
Sbjct: 625 IIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEESRRNSLGSDVL 684
Query: 621 YVHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVNASGGMNGYIWLCERNGL-RSIIPSP 679
+V HPL I Q ++ A +I G+ G + L L ++ SP
Sbjct: 685 FVGKHHPLCDFIV------EQYKTKNTEAVDIPPELCHGIQGKLTLNNNAVLPDQVVQSP 738
Query: 680 VKGLPDIERNQAM 692
V L D+ +N A+
Sbjct: 739 VPMLRDLTQNSAV 751
>gi|147899710|ref|NP_001091411.1| 5'-3' exoribonuclease 2 [Xenopus laevis]
gi|126631948|gb|AAI33744.1| LOC100049102 protein [Xenopus laevis]
Length = 457
Score = 457 bits (1176), Expect = e-126, Method: Compositional matrix adjust.
Identities = 226/409 (55%), Positives = 293/409 (71%), Gaps = 3/409 (0%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPAF+RWL+ +YP IV VE+ P+ + + PVD +KPNPN +EFDNLYLDMNGII
Sbjct: 1 MGVPAFFRWLSRKYPSIIVHCVEQKPK-ECNNIKIPVDTTKPNPNEVEFDNLYLDMNGII 59
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ KPAP + D++ +IF+YID +F +VRPR+LLY+AIDGVAPRAKMNQQR+RRF
Sbjct: 60 HPCTHPEDKPAPKNEDEMMVAIFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRF 119
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQ 180
RA+K+ E+ E+ R+R+E G L +E E DSN ITPGT+FM L+ L+Y+I
Sbjct: 120 RASKEGVESVEEKNRIREEVLSKGGYLPKEEMKERFDSNCITPGTEFMDNLAKCLRYYIA 179
Query: 181 ARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
RLN PGW+ VILSDA+VPGEGEHKIM YIR QR P DPNT HCL G DADLIML
Sbjct: 180 DRLNNDPGWKNLTVILSDASVPGEGEHKIMDYIRRQRAQPHHDPNTHHCLCGADADLIML 239
Query: 241 SLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH-K 299
LATHE +F+I+RE P Q C +CGQ GH EC G P + + + P +
Sbjct: 240 GLATHEPYFTIIREEFK-PNQPRPCGLCGQFGHEIKECQGMPREKKGEHDEFAGAPPGCE 298
Query: 300 KKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREG 359
+++ F+ + +LREYL+ EL + + PF +FER VDD+VF+CFFVGNDFLPH+P+LEIREG
Sbjct: 299 QEFIFIRLNILREYLEKELTMASLPFEFDFERSVDDWVFMCFFVGNDFLPHLPSLEIREG 358
Query: 360 AINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKR 408
AI+ L+++Y+ GGYLT++G V L+RV+ + +V ED IF+KR
Sbjct: 359 AIDRLVNIYKNVVHKTGGYLTESGFVNLERVQMIMLAVGEVEDNIFKKR 407
>gi|326498799|dbj|BAK02385.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 895
Score = 457 bits (1175), Expect = e-125, Method: Compositional matrix adjust.
Identities = 269/667 (40%), Positives = 372/667 (55%), Gaps = 109/667 (16%)
Query: 49 FDNLYLDMNGIIHPCF-HPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVA 107
+DNLYLDMN IIH CF +G+ V+ FD++D +F LV+PR+LLYLA+DGVA
Sbjct: 66 YDNLYLDMNEIIHKCFGRKNGQ--------VYLRFFDHMDRLFRLVKPRRLLYLAVDGVA 117
Query: 108 PRAKMNQQRTRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQF 167
P AK N+ R F++ K +AEAE L + F GK + ++ E D V PGT+F
Sbjct: 118 PMAKTNKLRQGYFKSTKQGTDAEAEAVLLTEIFRVQGKEVLPRDTYEFEDRTVKMPGTEF 177
Query: 168 MAVLSAALQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTR 227
M +S L++FI+ RLN P W+ KVILSDANVPGEGEHKIMS+IR QR+ +DPNTR
Sbjct: 178 METISVVLEWFIRERLNTDPEWKDIKVILSDANVPGEGEHKIMSFIRAQRSRENYDPNTR 237
Query: 228 HCLYGLDADLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPA 287
HCLYG DADLIML+LA+HE+H SILREV NP
Sbjct: 238 HCLYGHDADLIMLALASHEVHISILREV-----------------------------NP- 267
Query: 288 DWNGVDDTPIHKKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDF 347
NG I + YQF+NIWVLREYL EL++ P + ER++DDF+ +C +GNDF
Sbjct: 268 --NG----RIPARLYQFVNIWVLREYL--ELEMKTPGCKQDTERLIDDFICICCLMGNDF 319
Query: 348 LPHMPTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVL--------LDRVEKFIQSVAV 399
+P +P+LEI E A++LL+ Y+ F MGGY+ + ++ + R+EKF +++
Sbjct: 320 IPRIPSLEIHEFAVDLLIETYKTAFNRMGGYIVNTNKIKDKHGVYLEVSRLEKFFHELSL 379
Query: 400 YEDQIFQKR--------TRIQQAYEYNE-----------------------AMKLNARRE 428
E++I KR +IQ+ NE + + N R+
Sbjct: 380 CEEKILLKRYELQEKLLCKIQREAAGNEESSDGSDLISKSFVTQRSTSTCSSNEYNVRKN 439
Query: 429 SSE-------------ELLQAPVAVADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDV 475
+ E +L + D + PG+K R+Y +KF E+ +++ ++
Sbjct: 440 TRELWRAVNDICCSKDDLFKNRACKQDHIG---PGWKFRFYREKFGAQTSNEVGRLQTEM 496
Query: 476 VLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLM 535
V KY+EGLCW+ + Y+ +V SW W YP++YAPFASD L I+F + +P RPFDQLM
Sbjct: 497 VQKYLEGLCWMLQCYFSEVPSWTWCYPFYYAPFASDFNCLPQFNISFTMDKPLRPFDQLM 556
Query: 536 GTLP---AASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEK 592
LP SSALP+ Y L+ S I FYP +F+ID GKRF QGV KLPFID K
Sbjct: 557 AVLPPEVHVLSSALPKCYSTLIGCEESTIQMFYPSEFEIDTYGKRFLSQGVAKLPFIDNK 616
Query: 593 LLLRQTKKLEVFLTEEELFRNSVMLDLLYVHPQHPLYQQITLYCQLYHQLPPQDRFAWEI 652
LLL TK +E LT +E+ RN+V + +++ H L + L++ P + I
Sbjct: 617 LLLSATKMVEKDLTYDEMRRNNVRQERIFLRNSHSLTNN-EAFVALFNGYPQKKLL---I 672
Query: 653 DVNASGG 659
D + GG
Sbjct: 673 DTSEIGG 679
>gi|399215845|emb|CCF72533.1| unnamed protein product [Babesia microti strain RI]
Length = 803
Score = 457 bits (1175), Expect = e-125, Method: Compositional matrix adjust.
Identities = 274/708 (38%), Positives = 393/708 (55%), Gaps = 66/708 (9%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP FYRWL R+P D+ + GEG + D +DNLYLDMNGI+
Sbjct: 1 MGVPTFYRWLCSRFPKVPKDITNK-ANTSGEGDSHFTDSLFTE----RYDNLYLDMNGIV 55
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ P P++ +++F++IFDYID + +RP++LLYLA+DGVAPRAKMNQQR+RRF
Sbjct: 56 HPCCHPEYLPQPSNEEEMFEAIFDYIDRLIETIRPKRLLYLALDGVAPRAKMNQQRSRRF 115
Query: 121 RAA--KDAAEAEAEEERLRKE--FEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQ 176
+A ++ A+ + + ++ E ++ + + E+ + DSNVITPGT FM L ++
Sbjct: 116 KAVYEREYAQKQLQNDKSTPETNLSKSRQNIPQNEQQKVWDSNVITPGTPFMYQLGLEVE 175
Query: 177 YFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDAD 236
++ RL W VI+SD+N PGEGEHKI+++IR QR +DPNTRH ++G+DAD
Sbjct: 176 EYVSNRLENSDIWHNLTVIISDSNSPGEGEHKIINFIRTQRQSSNYDPNTRHVIHGMDAD 235
Query: 237 LIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPA-----DWNG 291
LIML+LATHE +F ILREV+ K F ++ P + W
Sbjct: 236 LIMLALATHEPNFFILREVVPF-----KQFNSTTQPTISDTSETVPSLKYSLMLRKSW-- 288
Query: 292 VDDTPIHKKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHM 351
K+ Q + I VLREYL Y + ER +DD V +CFF GNDFLPH+
Sbjct: 289 --------KQLQIIQIPVLREYLSYLFK----DCGCDLERCIDDLVLMCFFCGNDFLPHL 336
Query: 352 PTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRI 411
P++ I G+I+ ++++Y++ F +GGYLTD G++ + ++E F + E + +
Sbjct: 337 PSMSITLGSIDQMIYLYQQIFPTLGGYLTDCGKINMPQLEMFTSYLTAVEHETLSLKGNN 396
Query: 412 QQAYEYNEAMKLNARRESSEELLQAPVAVAD---TVKLGEPG-YKERYYADKFEISNPEE 467
A N EE + + D V LG P YK+ YY K + S ++
Sbjct: 397 HGATR-RAGNADNVTNNDEEETSKTGMIFTDLGIDVTLGSPEVYKKSYYIKKLDCSE-DD 454
Query: 468 IDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDLEITFFLGEP 527
+ K + +YV+G+ WV YYYQ + SW W+YPYHYAPFASDLK + + F LG P
Sbjct: 455 VAKTASAMAGEYVKGMEWVLEYYYQGIPSWNWYYPYHYAPFASDLKFTT--QNVFQLGTP 512
Query: 528 FRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLP 587
F P QLM LP SS LPEK+ +LM SPI ++YP ++D NG R+ +Q V LP
Sbjct: 513 FTPLQQLMSVLPVQSSHCLPEKFADLMRSEVSPIAEYYPRTLKLDPNGSRYRYQWVALLP 572
Query: 588 FIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVHPQHPLYQQITLYCQLYHQLPPQDR 647
FIDE+LLL K LE L++EE RN + + ++VH + + + D
Sbjct: 573 FIDEQLLLATVKPLEEELSKEEKERNKLKSEKIFVHKNMKINRYLDAKI---------DN 623
Query: 648 FAWEIDV-----NAS-----GGMNGYIWLCERNG------LRSIIPSP 679
A +ID+ +AS G +N Y + C++ G L+ I P P
Sbjct: 624 LATKIDLPIHIGSASLILTCGSINVYNYKCDKVGRHISKLLKGINPQP 671
>gi|387015832|gb|AFJ50035.1| 5'-3' exoribonuclease 2-like [Crotalus adamanteus]
Length = 945
Score = 456 bits (1174), Expect = e-125, Method: Compositional matrix adjust.
Identities = 224/409 (54%), Positives = 292/409 (71%), Gaps = 3/409 (0%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPAF+RWL+ +YP IV EE + + G+ PVD SKPNPN +EFDNLYLDMNGII
Sbjct: 1 MGVPAFFRWLSRKYPSIIVSCTEEKAK-EYNGIKIPVDTSKPNPNEVEFDNLYLDMNGII 59
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ KPAP + D++ +IF+YID +F +VRPR+LLY+AIDGVAPRAKMNQQR+RRF
Sbjct: 60 HPCTHPEDKPAPKNEDEMMVAIFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRF 119
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQ 180
RA+K+ E+ E++R+R+E E G L +E E DSN ITPGT+FM L+ L+Y+I
Sbjct: 120 RASKEGMESVEEKQRIRQEIMEKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIA 179
Query: 181 ARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
RLN PGW+ VILSDA+ PGEGEHKIM YIR QR P DPNT HCL G DADLIML
Sbjct: 180 DRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIML 239
Query: 241 SLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH-K 299
LATHE +F+I+RE P + + C +C Q GH +C G P + + + D P +
Sbjct: 240 GLATHEPNFTIIREEFK-PNKPKPCGLCNQFGHETKDCQGLPKEKQGEHDQFADCPPGME 298
Query: 300 KKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREG 359
+++ F+ + VLREYL+ EL + + PF + ER +DD+VF+CFFVGNDFLPH+P+LEIREG
Sbjct: 299 QEFIFIRLCVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREG 358
Query: 360 AINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKR 408
AI+ L+++Y+ GGYLT+ G V L+RV+ + +V ED IF+KR
Sbjct: 359 AIDRLVNIYKNVVHKTGGYLTENGYVNLERVQMIMLAVGEVEDSIFKKR 407
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 113/253 (44%), Positives = 155/253 (61%), Gaps = 10/253 (3%)
Query: 442 DTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFY 501
D V+L E G+K+RYY +KF++ ++ K ++ VV YVEGLCWV RYYYQ SW+W+Y
Sbjct: 508 DNVRLWEAGWKQRYYKNKFDVDVNDK--KFRRKVVQSYVEGLCWVLRYYYQGCASWKWYY 565
Query: 502 PYHYAPFASDLKDLSDLEITFFLG-EPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSP 560
P+HYAPFASD + ++DL F G +PF+P +QLMG PAAS + LP +R LM+DP S
Sbjct: 566 PFHYAPFASDFEGIADLVSDFEKGTKPFKPLEQLMGVFPAASGNFLPLTWRKLMSDPDSS 625
Query: 561 IYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLL 620
I FYP DF ID+NGK++AWQGV LPF+DE+ L ++ LT EE+ RNS+ D+L
Sbjct: 626 IIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALAQVYPNLTSEEMRRNSLGGDVL 685
Query: 621 YVHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVNASGGMNGYIWLCERNGL-RSIIPSP 679
+V H L+ I Q ++ +I G+ G I L E L + SP
Sbjct: 686 FVGKHHQLHDFI------LEQYKSNEKEPVDIAPELCHGIQGKITLDENPILPDKAVQSP 739
Query: 680 VKGLPDIERNQAM 692
V L D+ +N A+
Sbjct: 740 VPLLRDLTQNSAI 752
>gi|388857586|emb|CCF48735.1| related to dna exoribonuclease Dhp1p [Ustilago hordei]
Length = 1245
Score = 456 bits (1172), Expect = e-125, Method: Compositional matrix adjust.
Identities = 225/453 (49%), Positives = 309/453 (68%), Gaps = 7/453 (1%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQV----DGEGVARPVDVSKPNPNGMEFDNLYLDM 56
MGVPA +RWL+ +YP + V E+DP+ DG + P+D S PNPNG EFD LYLDM
Sbjct: 1 MGVPALFRWLSKKYPRIVTSVQEQDPKTAPGPDGSEIVLPLDTSTPNPNGEEFDCLYLDM 60
Query: 57 NGIIHPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQR 116
NGI+HPC HP+GKPAP S +++ +F Y + + +VRPR+LL +AIDGVAPRAKMNQQR
Sbjct: 61 NGIVHPCTHPEGKPAPESEEEMMIEVFAYTERVVNMVRPRRLLMMAIDGVAPRAKMNQQR 120
Query: 117 TRRFRAAKDAAEAEAEEERLRKEFEEAGKLLS--AKEKPETCDSNVITPGTQFMAVLSAA 174
+RRFRAAK+A E E E E++ G ++ A + + DSN ITPGT FM +L+A+
Sbjct: 121 SRRFRAAKEAREKHQENESALAEWKAKGLPITDHALQSKKAWDSNAITPGTPFMDLLAAS 180
Query: 175 LQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLD 234
L+Y++ ++N PGW+ +VI+SDA+VPGEGEHKIM +IR QR+ P DPNT+H +YGLD
Sbjct: 181 LRYWVAQKINTDPGWKDVQVIISDASVPGEGEHKIMEHIRRQRSHPEHDPNTKHVIYGLD 240
Query: 235 ADLIMLSLATHEIHFSILRE-VITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVD 293
ADLIMLSLATHE +F +LRE V + + C +CGQ GH AA C G P + + +
Sbjct: 241 ADLIMLSLATHEPYFKVLREDVFASDNKPKTCNICGQPGHFAASCKGSPKNKSGEHDEKA 300
Query: 294 DTPIHKKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPT 353
TP KK + FL++ LREYLQ EL+IP PF + ER +DD+VFL FFVGNDFLPH+P+
Sbjct: 301 QTPPDKKPFIFLDLPTLREYLQVELNIPQLPFAFDLERAIDDWVFLIFFVGNDFLPHLPS 360
Query: 354 LEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQ 413
LEIR+GAI+ L+ ++++E +MGGYLT+ G+V L R + + +A ED IF++R +
Sbjct: 361 LEIRDGAIDTLLRIWKKELPSMGGYLTNHGKVELSRAQLILNGLASEEDDIFRRRKEDED 420
Query: 414 AYEYNEAMKLNARRESSEELLQAPVAVADTVKL 446
E N+ + ++ +EL + A V++
Sbjct: 421 RRENNKKRREAIQQRREKELDEGNFGNAPMVEV 453
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 105/226 (46%), Positives = 144/226 (63%), Gaps = 8/226 (3%)
Query: 442 DTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFY 501
DTVK+ EPGY+ERYY +KF + + ++ VV Y+EGL WV YYYQ V SWQW+Y
Sbjct: 641 DTVKMWEPGYRERYYREKFGVDLSDT--DFRRQVVKSYIEGLSWVLAYYYQGVPSWQWYY 698
Query: 502 PYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPI 561
P+H++PFA+D +DL+ L+I F LG PF+PF+QLMG LPA S +++PE + LMT+ S I
Sbjct: 699 PFHFSPFAADFEDLASLDIKFELGAPFKPFEQLMGVLPADSRASIPEPFHPLMTESDSEI 758
Query: 562 YKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLY 621
FYP +F+IDMNGK+ AWQGV LPFIDEK LL K L+E+E+ RN + L+
Sbjct: 759 IDFYPSEFEIDMNGKKMAWQGVALLPFIDEKRLLDALKDKYPLLSEDEVRRNGFGNNTLF 818
Query: 622 VHPQHPLYQQITLYCQLYHQLPPQD---RFAWEIDVNASGGMNGYI 664
V + LY C+ + D + A I+ + G+ GY+
Sbjct: 819 VGNESRLYD---FLCEEIYSKKASDEEKKKAIPINPALTRGITGYV 861
>gi|348518303|ref|XP_003446671.1| PREDICTED: 5'-3' exoribonuclease 2 [Oreochromis niloticus]
Length = 982
Score = 455 bits (1171), Expect = e-125, Method: Compositional matrix adjust.
Identities = 227/409 (55%), Positives = 290/409 (70%), Gaps = 3/409 (0%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPAF+RWL+ +YP IV VEE + + GV PVD +KPNPN +EFDNLYLDMNGII
Sbjct: 1 MGVPAFFRWLSRKYPSIIVHCVEEKGK-ECNGVRIPVDTTKPNPNEVEFDNLYLDMNGII 59
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ KPAP + D++ +IF+YID +F +VRPR++LY+AIDGVAPRAKMNQQR+RRF
Sbjct: 60 HPCTHPEDKPAPKNEDEMMVAIFEYIDRLFNIVRPRRVLYMAIDGVAPRAKMNQQRSRRF 119
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQ 180
RA+K+ E E+ R+R+E + G L +E E DSN ITPGT+FM L+ L+Y++
Sbjct: 120 RASKEGVELVEEKSRVREEVIQKGGYLPPEEIKERFDSNCITPGTEFMDNLAQCLRYYVA 179
Query: 181 ARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
RL PGW+ V LSDA+VPGEGEHKIM +IR QR P DPNT HCL G DADLIML
Sbjct: 180 ERLTNDPGWKNIVVFLSDASVPGEGEHKIMDFIRRQRGQPNHDPNTHHCLCGADADLIML 239
Query: 241 SLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDT-PIHK 299
LATHE +F+I+RE P + C +CGQ GH C G P + + +T P +
Sbjct: 240 GLATHEPNFTIIREEFK-PNKPRPCGLCGQTGHEIKACQGMPREKQGQHDEFANTMPAAE 298
Query: 300 KKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREG 359
+++ F+ + VLREYL EL + + PFP +FER VDD+VF+CFFVGNDFLPH+P+LEIREG
Sbjct: 299 QEFIFIRLCVLREYLARELTMASLPFPFDFERSVDDWVFMCFFVGNDFLPHLPSLEIREG 358
Query: 360 AINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKR 408
AI+ L+ +Y+ GGYLT G V L+RVE +Q+V V ED IF+KR
Sbjct: 359 AIDRLVGIYKDVVHKTGGYLTQNGYVNLERVEMIMQAVGVAEDNIFKKR 407
Score = 208 bits (529), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 113/253 (44%), Positives = 155/253 (61%), Gaps = 10/253 (3%)
Query: 442 DTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFY 501
D V+L E G+K+RYY +KF++ +E ++ VV YVEGLCWV RYYYQ SW+W++
Sbjct: 515 DNVRLWEEGWKQRYYKNKFDVDATDE--DFRRKVVQSYVEGLCWVLRYYYQGCASWKWYF 572
Query: 502 PYHYAPFASDLKDLSDLEITFFLG-EPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSP 560
P+HYAPFASD KD+ D+ F +PF+P +QLMG PAAS + LP +RNLM+ P SP
Sbjct: 573 PFHYAPFASDFKDIKDMFSDFEKNTKPFKPLEQLMGVFPAASGNFLPPTWRNLMSSPDSP 632
Query: 561 IYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLL 620
I FYP DF ID+NGK++AWQGV LPF+DE+ L + LT EE RNS+ D+L
Sbjct: 633 IIDFYPDDFAIDLNGKKYAWQGVALLPFVDERRLRAALADVYPDLTSEEKRRNSLGSDVL 692
Query: 621 YVHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVNASGGMNGYIWLCERNGL-RSIIPSP 679
++ HPL+ I +LY + EI G+ G + L + L + + SP
Sbjct: 693 FLGKSHPLFDFIH---ELYRT---ESNEGTEIPAELCHGIQGRLNLDDDPILPDNTVRSP 746
Query: 680 VKGLPDIERNQAM 692
V L D+ +N A+
Sbjct: 747 VPMLRDVSQNTAI 759
>gi|242067311|ref|XP_002448932.1| hypothetical protein SORBIDRAFT_05g001880 [Sorghum bicolor]
gi|241934775|gb|EES07920.1| hypothetical protein SORBIDRAFT_05g001880 [Sorghum bicolor]
Length = 712
Score = 454 bits (1169), Expect = e-125, Method: Compositional matrix adjust.
Identities = 242/561 (43%), Positives = 335/561 (59%), Gaps = 77/561 (13%)
Query: 72 PTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRFRAAKDAAEAEA 131
P + +VF+S+F+Y+D +F +VRP +LLYLA+DGVAP AKMN+ R RF +A+ A E
Sbjct: 27 PMTVSEVFESLFEYMDRLFRIVRPTRLLYLAVDGVAPCAKMNRVRRGRFHSARMATSEEI 86
Query: 132 EEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQARLNQIPGWQF 191
E+ +RKE GK + +E E D NVITPGT+FM LS AL+Y+I+ R N P W+
Sbjct: 87 EDYEMRKELRAQGKEETPQEISEVSDPNVITPGTEFMEKLSQALEYYIRGRFNSDPWWRD 146
Query: 192 TKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIMLSLATHEIHFSI 251
VILSDANVPGEGEHKIMS++R Q N+ G+DPNTRHCL+G DADLIML+LA+HE+HFSI
Sbjct: 147 IMVILSDANVPGEGEHKIMSFVRAQGNMEGYDPNTRHCLFGHDADLIMLALASHEVHFSI 206
Query: 252 LREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIHKKKYQFLNIWVLR 311
LRE FLNIWVLR
Sbjct: 207 LRE-------------------------------------------------FLNIWVLR 217
Query: 312 EYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHVYRRE 371
EYL+ E I +P + ER++DDF+F+CF +GNDF+PH+P+LE EGA++LL+ VY+
Sbjct: 218 EYLEIEFKILDPVCEPDIERLIDDFIFICFLMGNDFIPHIPSLETHEGAVDLLIEVYKTT 277
Query: 372 FTAMGGYLTDAGEVL--------LDRVEKFIQSVAVYEDQIFQKRTRIQQAY---EYNEA 420
F MGGY+ + +V + R+E F +++YE++IF KR +++Q Y+E
Sbjct: 278 FNKMGGYIINTDKVKDKNGAYLEVSRLEIFFHELSMYEEKIFLKRYKLEQDLLLKTYHEM 337
Query: 421 MKLNARRESSE------ELLQAPVAVADTVKLGEPGYKERYYADKFEISNPEEIDKVKKD 474
++ + E E +LL D ++LG PG+K R++ + F EI K++ D
Sbjct: 338 LREASESERPELRQKLDDLLFNEERPYDRIRLGLPGWKSRFFREYFGAETSNEIGKLQND 397
Query: 475 VVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQL 534
+ KY+EGLCWV + Y+ DV SW W+YP++ APF SDLK LS ++I+F + +P RPFDQL
Sbjct: 398 MAQKYLEGLCWVLQCYFADVPSWSWYYPFYVAPFVSDLKGLSRVDISFTVDKPLRPFDQL 457
Query: 535 MGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLL 594
M LP S ALP+ Y+ +M +F P + D G+ F W G I E+LL
Sbjct: 458 MAVLPMQSWCALPKCYKEMMGRK-----EFDYPRLEHDTKGRHFLWNG------ISEELL 506
Query: 595 LRQTKKLEVFLTEEELFRNSV 615
L TK ++ LT E RN+
Sbjct: 507 LSATKVVDKKLTTHESRRNTT 527
>gi|170593371|ref|XP_001901438.1| 5'-3' exoribonuclease 2 [Brugia malayi]
gi|158591505|gb|EDP30118.1| 5'-3' exoribonuclease 2, putative [Brugia malayi]
Length = 937
Score = 454 bits (1167), Expect = e-125, Method: Compositional matrix adjust.
Identities = 230/450 (51%), Positives = 301/450 (66%), Gaps = 11/450 (2%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPAF+RWL +YP +VD VEE P+ D G+ PV+ PNPN EFDNLYLDMNGII
Sbjct: 1 MGVPAFFRWLTRKYPSVVVDAVEEKPR-DLNGIRVPVNTVDPNPNFQEFDNLYLDMNGII 59
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ +P P + +++F IF+YID +F +VRPRKLLY+A+DGVAPRAKMNQQR+RRF
Sbjct: 60 HPCTHPEDRPCPKTEEEMFMLIFEYIDRLFAIVRPRKLLYMAVDGVAPRAKMNQQRSRRF 119
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQ 180
RA+K+A E + R E G L ++K E DSN ITPGT FMA L+ AL+Y++
Sbjct: 120 RASKEAIEKVEQIAETRLRLESEGYPLPPEKKTEHFDSNCITPGTPFMARLAVALRYYVH 179
Query: 181 ARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
RLN PGW+ VILSDANVPGEGEHKIM +IR QR P DPNT HCL G DADLIML
Sbjct: 180 QRLNSDPGWRKIAVILSDANVPGEGEHKIMDFIRRQRASPSHDPNTVHCLCGADADLIML 239
Query: 241 SLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIHKK 300
LATHE +F+I+RE +P QQ C +CGQ GH +C G D+ ++ TP+ K+
Sbjct: 240 GLATHEPNFNIIREEF-VPNQQRPCDLCGQYGHGLNDCKGLASDDNSE---CQSTPLQKE 295
Query: 301 -KYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREG 359
+ F+ + VLREYL+ EL IPN P + ER +DD+VF+CFFVGNDFLPH+P+LEIRE
Sbjct: 296 TNFIFIRLPVLREYLERELHIPNCSIPFDLERAIDDWVFMCFFVGNDFLPHLPSLEIREN 355
Query: 360 AINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYEYNE 419
AI+ L+ +Y+ M G+LTD+G V ++R + + + ED+IF+ R +Q ++
Sbjct: 356 AIDRLVKLYKDMVCEMKGHLTDSGIVHIERAQIILDKLGEVEDEIFKSRQEREQQFK--- 412
Query: 420 AMKLNARRESSEELLQAPVAVADTVKLGEP 449
+ N ++ E+ L P + L P
Sbjct: 413 --RRNKEKKWREQALATPSYIPSRGSLLSP 440
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 115/286 (40%), Positives = 157/286 (54%), Gaps = 19/286 (6%)
Query: 411 IQQAYEYNEAMKLNARRESSEELLQAPVAVADTVKLGEPGYKERYYADKFEISNPEEIDK 470
I + ++ + +K N+ SSE+ V D V+L E G+K+RYY KF++ + +
Sbjct: 488 ISEKDDHKQELKNNS---SSED------EVFDEVRLWEDGWKDRYYKSKFQVDGKDIV-- 536
Query: 471 VKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDLEITFFL-GEPFR 529
++ V L YVEGLCWV YYYQ SW W+YP+HYAPFASD +S + F EPF+
Sbjct: 537 FRRKVALAYVEGLCWVLHYYYQGCASWDWYYPFHYAPFASDFDAVSQFKPDFSAYTEPFK 596
Query: 530 PFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFI 589
P QLM PAAS LPE ++ LM P SPI FYP +F ID+NGK+ AWQGV LPF+
Sbjct: 597 PLQQLMSVFPAASRMHLPEAWQELMISPVSPIIDFYPDNFVIDLNGKKCAWQGVALLPFV 656
Query: 590 DEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVHPQHPLYQQITLYCQLYHQLPPQDRFA 649
DEK LL +E L E RNS D L+V P HP Y + + ++ +D
Sbjct: 657 DEKRLLEVLNPMEDKLDAFEKERNSRGPDRLFVGPSHPFYN----FAETLYENSRKDSTD 712
Query: 650 WEIDVNASGGMNGYIWLCER---NGLRSIIPSPVKGLPDIERNQAM 692
ID + + GM G + + + G P V DI +N+A+
Sbjct: 713 LAIDTSLTFGMAGTVGVDAKAVMKGQNYKSPLSVDEFTDIAKNKAI 758
>gi|60677951|gb|AAX33482.1| RE02462p [Drosophila melanogaster]
Length = 519
Score = 452 bits (1163), Expect = e-124, Method: Compositional matrix adjust.
Identities = 246/510 (48%), Positives = 318/510 (62%), Gaps = 50/510 (9%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPV--DVSKPNPNGMEFDNLYLDMNG 58
MGVPAF+RWL+ +YP I++ E+ QVD + R + D + PNPNG+EFDNLYLDMNG
Sbjct: 1 MGVPAFFRWLSRKYPSVIIEC-NENKQVDAD-TGRNIYEDPTLPNPNGIEFDNLYLDMNG 58
Query: 59 IIHPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
IIHPC HP+ KPAP + D++ +IF+ ID +F +VRPRKLLY+AIDGVAPRAKMNQQR+R
Sbjct: 59 IIHPCTHPEDKPAPKNEDEMMVAIFECIDRLFGIVRPRKLLYMAIDGVAPRAKMNQQRSR 118
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAG-KLLSAKEKPETCDSNVITPGTQFMAVLSAALQY 177
RFRAAK+ E E R+R+E G KL KEK E DSN ITPGT FM LS L Y
Sbjct: 119 RFRAAKETTEKRLEIARIREELLSRGCKLPPEKEKGEHFDSNCITPGTPFMDRLSKCLHY 178
Query: 178 FIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADL 237
F+ R N P W+ KVILSDANVPGEGEHKIM YIR QR P DPNT+H L G DADL
Sbjct: 179 FVHDRQNNNPAWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHVLCGADADL 238
Query: 238 IMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPI 297
IML LATHE +F+I+RE LP + C +C GH +C G P N D PI
Sbjct: 239 IMLGLATHEPNFTIIREEF-LPNKPRPCDICNGFGHEMDKCVGLGATAPTSANFKPDVPI 297
Query: 298 HKK-KYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEI 356
+ K+ F+ + VLREYL+ L++PN PF +FER +DD+VF+CFFVGNDFLPH+P+LEI
Sbjct: 298 GAEVKFIFVRLSVLREYLKQTLEMPNLPFEYSFERALDDWVFMCFFVGNDFLPHLPSLEI 357
Query: 357 REGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYE 416
REGA++ L+ +Y++ GYLTD+G+V LDRV+ + + EDQIF+ R R ++ ++
Sbjct: 358 REGAVDRLVELYKKCVYKTRGYLTDSGDVNLDRVQLIMTDLGNAEDQIFKSRQRREEQFK 417
Query: 417 -YNEAMKLNARRESSEELLQAPVAVADT-------------------------------- 443
++A K R + L Q+ +
Sbjct: 418 ARDKARKRQERNQDHGSLNQSAFGASAVGPNSQQRSVGNYKEEAAALRNRKRTSDMANLD 477
Query: 444 ----------VKLGEPGYKERYYADKFEIS 463
V+L E G+K+RYY KF+++
Sbjct: 478 DEDEEENNDEVRLWEDGFKDRYYESKFDVA 507
>gi|345789898|ref|XP_003433291.1| PREDICTED: 5'-3' exoribonuclease 2 [Canis lupus familiaris]
Length = 874
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 277/683 (40%), Positives = 375/683 (54%), Gaps = 82/683 (12%)
Query: 81 SIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRFRAAKDAAEAEAEEERLRKEF 140
+IF+YID +F +VRPR+LLY+AIDGVAPRAKMNQQR+RRFRA+K+ EA E++R+R+E
Sbjct: 4 AIFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRFRASKEGMEAAVEKQRVREEI 63
Query: 141 EEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQARLNQIPGWQFTKVILSDAN 200
G L +E E DSN ITPGT+FM L+ L+Y+I RLN PGW+ VILSDA+
Sbjct: 64 LAKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIADRLNNDPGWKNLTVILSDAS 123
Query: 201 VPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIMLSLATHEIHFSILREVITLPG 260
PGEGEHKIM YIR QR P DPNT HCL G DADLIML LATHE +F+I+RE P
Sbjct: 124 APGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLGLATHEPNFTIIREEFK-PN 182
Query: 261 QQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDT-PIHKKKYQFLNIWVLREYLQYELD 319
+ + C +C Q GH +C G P + + + D+ P + ++ FL + VLREYL+ EL
Sbjct: 183 KPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEGEFIFLRLNVLREYLERELT 242
Query: 320 IPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHVYRREFTAMGGYL 379
+ + PF + ER +DD+VF+CFFVGNDFLPH+P+LEIREGAI+ L+++Y+ GGYL
Sbjct: 243 MASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREGAIDRLVNIYKNVVHKTGGYL 302
Query: 380 TDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYEYNEAM------------------ 421
T++G V L RV+ + +V ED IF+KR + ++ +
Sbjct: 303 TESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSFRRRQKEKRKRMKRDQPAFSPGGIL 362
Query: 422 ---KLNARRESSEELLQAPVAVADTVKLGEPGYKERYYADKFEI-SNPEEIDKVKK---- 473
L +R ++ P A +++ F +P I +K+
Sbjct: 363 TPHALGSRNSPGSQVASNPRQAAYEMRMQNNSSPSISPNTSFTSDGSPSPIGGIKRKAED 422
Query: 474 --------DVVLKYVEGLCWVCRYY--------------------YQDVCSWQWFYPYH- 504
D V + G W RYY Y + W Y Y
Sbjct: 423 SDSEPEPEDNVRLWEAG--WKQRYYKNKFDVDAADEKFRRKVVQSYVEGLCWVLRYYYQG 480
Query: 505 ------YAPF-----ASDLKDLSDLEITFFLG-EPFRPFDQLMGTLPAASSSALPEKYRN 552
Y PF ASD + ++D+ F G +PF+P +QLMG PAAS + LP +R
Sbjct: 481 CASWKWYYPFHYAPFASDFEGIADMPSDFEKGTKPFKPLEQLMGVFPAASGNFLPPSWRK 540
Query: 553 LMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFR 612
LM+DP S I FYP DF ID+NGK++AWQGV LPF+DE+ L +++ LT EE R
Sbjct: 541 LMSDPDSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEETKR 600
Query: 613 NSVMLDLLYVHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDV--NASGGMNGYIWLCERN 670
NS+ D+L+V HPL+ I Q P +DV G+ G L E
Sbjct: 601 NSLGGDVLFVGKHHPLHDFILELYQTGSTEP--------VDVPPELCHGIQGKFSLDEEA 652
Query: 671 GL-RSIIPSPVKGLPDIERNQAM 692
L I+ SPV L D+ +N A+
Sbjct: 653 VLPDQIVCSPVPMLRDLTQNAAI 675
>gi|427778459|gb|JAA54681.1| Putative 5'-3' exonuclease xrn1/kem1/sep1 involved in dna strand
exchange and mrna turnover, partial [Rhipicephalus
pulchellus]
Length = 856
Score = 450 bits (1158), Expect = e-123, Method: Compositional matrix adjust.
Identities = 231/437 (52%), Positives = 297/437 (67%), Gaps = 29/437 (6%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPAF+RWL+ +YP + VEE PQV +GV PVD +KPNPN +EFDNLYLDMNGII
Sbjct: 1 MGVPAFFRWLSRKYPSIVAHCVEEKPQV-VDGVKIPVDTTKPNPNDVEFDNLYLDMNGII 59
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ KPAP + D++ IF+YID IF +VRPR+LLY+AIDGVAPRAKMNQQR+RRF
Sbjct: 60 HPCCHPENKPAPKNEDEMMVDIFEYIDRIFSVVRPRRLLYMAIDGVAPRAKMNQQRSRRF 119
Query: 121 RAAKDAAEAEAEEERLRKEFEEAG-KLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFI 179
RA+K++AE E R+R E + G L K+K E DSN ITPGT FM L+ L Y+I
Sbjct: 120 RASKESAEKVEEMSRIRAELRDRGVPLPPEKDKSEHFDSNCITPGTPFMDRLAKCLHYYI 179
Query: 180 QARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIM 239
RLN PGW+ +VILSDANVPGEGEHKIM +IR QR P DPNT HCL G DADLIM
Sbjct: 180 HDRLNNDPGWKNIQVILSDANVPGEGEHKIMDFIRRQRANPKHDPNTHHCLCGADADLIM 239
Query: 240 LSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVD------ 293
L LATHE +F+I+RE P Q C +CGQ+GH +C G P + +++ ++
Sbjct: 240 LGLATHEPNFTIIREEFK-PNQPRPCELCGQLGHEMKDCQGLPKEKTGEFDELEKPIGSE 298
Query: 294 -------------------DTPI-HKKKYQFLNIWVLREYLQYELDIPNPPFPINFERIV 333
+ PI + ++ FL + VL EYL+ EL + N PF N ER +
Sbjct: 299 TEFIFLXXPKEKTGEFDELEKPIGSETEFIFLRLNVLHEYLERELRMDNLPFDFNIERAI 358
Query: 334 DDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKF 393
DD+VF+CFFVGNDFLPH+P+LEIREGAI+ L+++Y++ GGYLT+ G V L+RV+
Sbjct: 359 DDWVFMCFFVGNDFLPHLPSLEIREGAIDRLVNLYKKAVYRTGGYLTENGFVALNRVQLI 418
Query: 394 IQSVAVYEDQIFQKRTR 410
+ + ED+IF++R +
Sbjct: 419 MSELGDAEDEIFKRRQQ 435
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 90/161 (55%), Positives = 114/161 (70%), Gaps = 3/161 (1%)
Query: 442 DTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFY 501
D V+L E G++ERYY KF+IS P+ + + DV YVEGLCWV RYYYQ SW+WF+
Sbjct: 546 DEVRLWEDGWRERYYVSKFDIS-PDNV-AFRHDVASAYVEGLCWVLRYYYQGCASWKWFF 603
Query: 502 PYHYAPFASDLKDLSDLEITFFLG-EPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSP 560
PYHYAPFASD ++ DL+I F G +PF+P +QLM PAAS LP + +LM DP SP
Sbjct: 604 PYHYAPFASDFINVGDLKIEFERGTQPFKPMEQLMSVFPAASKQHLPLPWADLMDDPDSP 663
Query: 561 IYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKL 601
I FYP DF+ID+NGK++AWQGV LPF+DEK LL + +
Sbjct: 664 IIDFYPTDFKIDLNGKKYAWQGVALLPFVDEKRLLETVQTV 704
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 57/118 (48%), Positives = 75/118 (63%), Gaps = 3/118 (2%)
Query: 526 EPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVK 585
+PF+P +QLM PAAS LP + +LM DP SPI FYP DF+ID+NGK++AWQGV
Sbjct: 711 QPFKPMEQLMSVFPAASKQHLPLPWADLMDDPDSPIIDFYPTDFKIDLNGKKYAWQGVAL 770
Query: 586 LPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVHPQHPLYQQ-ITLY--CQLYH 640
LPF+DEK LL + + LTE+E RN+ D+ YV H Y + LY C+ Y+
Sbjct: 771 LPFVDEKRLLETVQTVYPHLTEDERKRNTRGDDVFYVRKGHRGYSYLVGLYEACKDYN 828
>gi|308805434|ref|XP_003080029.1| putative 5-3 exoribonuclease (ISS) [Ostreococcus tauri]
gi|116058488|emb|CAL53677.1| putative 5-3 exoribonuclease (ISS) [Ostreococcus tauri]
Length = 1057
Score = 450 bits (1157), Expect = e-123, Method: Compositional matrix adjust.
Identities = 235/411 (57%), Positives = 291/411 (70%), Gaps = 18/411 (4%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP+FYRWL+ +YP + DVVE++P +D G A +D S+ NPNG+EFDNLYLDMNGII
Sbjct: 1 MGVPSFYRWLSQKYPKIVEDVVEDEP-MDELGRAVALDASRANPNGIEFDNLYLDMNGII 59
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPCFHP+ +PAPT+ +VF++IFDYID +FL++RPRK+LY+AIDGVAPRAKMNQQR+RRF
Sbjct: 60 HPCFHPEDRPAPTTEGEVFENIFDYIDRLFLMIRPRKVLYMAIDGVAPRAKMNQQRSRRF 119
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQ 180
RAA++A E EEE+LR++ G + K + DSNVITPGT FM LS AL+Y++
Sbjct: 120 RAAQEAKEKAMEEEKLREKLTREGVKVQPKVESGVFDSNVITPGTPFMGRLSEALKYYVH 179
Query: 181 ARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
RLN PGW+ +VI SDA+VPGEGEHK M YIR QR LPG +PNTRH +YGLDADLIML
Sbjct: 180 DRLNNDPGWRGIEVIFSDASVPGEGEHKAMHYIRQQRGLPGANPNTRHVVYGLDADLIML 239
Query: 241 SLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIHKK 300
LATHE HF ILRE++ Q++ +G E K I +K
Sbjct: 240 GLATHEPHFWILRELVF---QKKDTNAPQTLGMGTEETKKK-------------VAIARK 283
Query: 301 KYQFLNIWVLREYLQYELDIPNP-PFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREG 359
YQ L++ VLREYL EL P PF ++ ER+ DDF+F+CFFVGNDFLPH PTLEIREG
Sbjct: 284 PYQLLSVSVLREYLALELRPVAPTPFKLDPERLFDDFIFMCFFVGNDFLPHSPTLEIREG 343
Query: 360 AINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTR 410
AI+LLM +YR +GGYL G L VE F+Q VA +ED IFQKR +
Sbjct: 344 AIDLLMTLYRNLLPTLGGYLCADGRPNLPVVENFVQVVAQHEDAIFQKRAK 394
Score = 251 bits (641), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 123/251 (49%), Positives = 162/251 (64%), Gaps = 4/251 (1%)
Query: 442 DTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFY 501
DT++LGE G+K+RYY K + + P+ +++ + +V++YV GL WVCRYY++ CSW WFY
Sbjct: 631 DTIRLGESGWKDRYYEAKMK-ATPQTREQIARGMVVEYVRGLIWVCRYYFEGCCSWGWFY 689
Query: 502 PYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPI 561
PYHYAPFASDL +L+ + F LG+PF+PF QLMG LPAASS ALP Y LM+D SPI
Sbjct: 690 PYHYAPFASDLTNLAGISTDFELGKPFKPFSQLMGVLPAASSHALPAAYAPLMSDKDSPI 749
Query: 562 YKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLY 621
FYP DF +DMNGKRF WQ V LP+ID + LL QT LE LT EE RNS+ + +Y
Sbjct: 750 IDFYPEDFDLDMNGKRFTWQAVALLPWIDSRRLLEQTDMLEYTLTAEEKRRNSINEEEIY 809
Query: 622 VHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVNASGGMNGYIWLCERNGLRSIIPSPVK 681
V+ HPL +Q + +L + +D S GMN + +R S IPSP+
Sbjct: 810 VNTAHPLAKQ---FVKLDEREDEDAEKTLPMDPKLSDGMNATLVSVKREAKPSTIPSPIS 866
Query: 682 GLPDIERNQAM 692
PDI+ NQ +
Sbjct: 867 CRPDIQNNQVI 877
>gi|195398773|ref|XP_002057995.1| GJ15840 [Drosophila virilis]
gi|194150419|gb|EDW66103.1| GJ15840 [Drosophila virilis]
Length = 1656
Score = 450 bits (1157), Expect = e-123, Method: Compositional matrix adjust.
Identities = 254/647 (39%), Positives = 370/647 (57%), Gaps = 106/647 (16%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP F+R++++RYP + ++ E S P EFDNLYLDMNGI+
Sbjct: 1 MGVPKFFRYISERYPC-LSELAREH--------------SIP-----EFDNLYLDMNGIV 40
Query: 61 HPCFHPDGKPAPTSYDD--VFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C HPD ++ +F+ I++YID +F L++P+KL +LA+DGVAPRAKMNQQR+R
Sbjct: 41 HNCSHPDDNNIHFHLEEPQIFQDIYNYIDKLFYLIKPQKLFFLAVDGVAPRAKMNQQRSR 100
Query: 119 RFRAAKDAA--EAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQ 176
RFR+A++A EA+A + R+E E DSN ITPGT+FMA L L+
Sbjct: 101 RFRSAREAEMLEAKALQRGERREHER-------------FDSNCITPGTEFMARLQLGLR 147
Query: 177 YFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDAD 236
F++ +++ P WQ ++ILS PGEGEHKIM YIR + P FDPNTRHCLYGLDAD
Sbjct: 148 CFLRTKISTDPLWQKCRIILSGQETPGEGEHKIMDYIRYMKAQPNFDPNTRHCLYGLDAD 207
Query: 237 LIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTP 296
LI+L L THE+HF +LRE + K G N V T
Sbjct: 208 LIILGLCTHELHFVVLREEV------------------------KFGRN------VKRTS 237
Query: 297 IHKKKYQFLNIWVLREYLQYEL-DIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLE 355
+ + ++ L++ +LREYL+ E + P ++ +++DD+V + F VGNDF+PH+P L
Sbjct: 238 VEETRFFLLHLGLLREYLELEFHQLSTPEQKLDVAQLIDDWVLMGFMVGNDFIPHLPCLH 297
Query: 356 IREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRT------ 409
I A+ LL Y R + +GG + + G++ L+R+E+F+ +++ E Q+F++ +
Sbjct: 298 ISSNALPLLYKTYIRIYRQLGGNINEHGKLNLERLEQFMHALSEVELQLFEEHSDDLKYM 357
Query: 410 -RIQQAYEYNEAMKLNARRESSEELLQAPVAVADTVKLGE------------------PG 450
+A++ + A N + + L A + +++KL E
Sbjct: 358 NAKTEAFDVDVAELKNGSFDGYSDDLAA--LIDNSMKLYEGDSDEDFGDEQTSLRSEFQN 415
Query: 451 YKERYYADKFEISNPEEIDKVKKDVVLK----YVEGLCWVCRYYYQDVCSWQWFYPYHYA 506
YK YY +KF+ +++ D++ + YV + WV YYY+ V SW W+YPYHYA
Sbjct: 416 YKRNYYRNKFK-------NEMHSDLIAELGYHYVTAMQWVLDYYYRGVQSWDWYYPYHYA 468
Query: 507 PFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYP 566
PF SDL ++ D+ I F LG+PF PF QL+ LPAAS S LP Y +LM +P+SP+ +FYP
Sbjct: 469 PFISDLTNIKDIRINFKLGKPFLPFQQLLAVLPAASVSLLPAAYHDLMLNPNSPLAEFYP 528
Query: 567 PDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRN 613
+F+ D+NGK+ W+ VV +PFI+E LLR E L EE RN
Sbjct: 529 TEFESDLNGKKHDWEAVVLIPFIEEDRLLRAMSACEPLLNSEERNRN 575
>gi|212645622|ref|NP_496958.2| Protein XRN-2 [Caenorhabditis elegans]
gi|218511968|sp|Q9U299.2|XRN2_CAEEL RecName: Full=5'-3' exoribonuclease 2 homolog
gi|189309813|emb|CAB54449.2| Protein XRN-2 [Caenorhabditis elegans]
Length = 975
Score = 449 bits (1156), Expect = e-123, Method: Compositional matrix adjust.
Identities = 230/424 (54%), Positives = 293/424 (69%), Gaps = 6/424 (1%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPAF+RWL +YP ++V+ ED Q D +G PVD ++PNPN EFDNLYLDMNGII
Sbjct: 1 MGVPAFFRWLTKKYPATVVNA-NEDRQRDQDGNRVPVDCTQPNPNFQEFDNLYLDMNGII 59
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ +PAP + D++F IF+YID I+ +VRPR+LLY+AIDGVAPRAKMNQQR+RRF
Sbjct: 60 HPCTHPEDRPAPKNEDEMFALIFEYIDRIYSIVRPRRLLYMAIDGVAPRAKMNQQRSRRF 119
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPET-CDSNVITPGTQFMAVLSAALQYFI 179
RA+K+ AE EA E R G + K+K E DSN ITPGT FMA L+ AL+Y+I
Sbjct: 120 RASKEMAEKEASIEEQRNRLMAEGIAVPPKKKEEAHFDSNCITPGTPFMARLADALRYYI 179
Query: 180 QARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIM 239
R+ W ++ILSDANVPGEGEHKIM Y+R QR P DPNT HCL G DADLIM
Sbjct: 180 HDRVTNDASWANIEIILSDANVPGEGEHKIMDYVRKQRGNPAHDPNTVHCLCGADADLIM 239
Query: 240 LSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIHK 299
L +ATHE +F+I+RE +P Q C +CGQ GH EC G +N D P +
Sbjct: 240 LGIATHEANFNIIREEF-VPNQPRACDLCGQYGHELKECRG--AENETDLGDDYCKPEQR 296
Query: 300 KK-YQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIRE 358
+K + FL I VLREYL+ EL +PN PF + ER +DD+VFLCFFVGNDFLPH+P+LEIRE
Sbjct: 297 EKNFIFLRIPVLREYLEKELSMPNLPFKFDVERALDDWVFLCFFVGNDFLPHLPSLEIRE 356
Query: 359 GAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYEYN 418
GAI+ L+ +Y+ M GYLT G LDRVE ++ + ED+IF++R + ++ ++ N
Sbjct: 357 GAIDRLIKLYKEMVYQMKGYLTKDGIPELDRVEMIMKGLGRVEDEIFKRRQQDEERFQEN 416
Query: 419 EAMK 422
+ K
Sbjct: 417 QRNK 420
Score = 172 bits (437), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 90/220 (40%), Positives = 131/220 (59%), Gaps = 11/220 (5%)
Query: 423 LNARRESSEELLQAPV-----AVADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVL 477
+ +R+ +E+ L P D ++L E G+K+RYY KF++ + ++I+ + V
Sbjct: 509 IASRKRKAEQPLIKPEEEEDEGPKDDIRLYESGWKDRYYRAKFDVGS-DDIE-FRHRVAW 566
Query: 478 KYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDLEITFFL-GEPFRPFDQLMG 536
YVEGLCWV RYYYQ SW W++PYHYAPFASD + + + + F +PF P +QLM
Sbjct: 567 AYVEGLCWVLRYYYQGCASWDWYFPYHYAPFASDFETVGEFQPDFTRPTKPFNPLEQLMS 626
Query: 537 TLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLR 596
PAAS LP +++ LM SPI YP DF+ID+NGK++AWQGV LPF+DE LL
Sbjct: 627 VFPAASKQHLPVEWQKLMIQDDSPIIDLYPADFRIDLNGKKYAWQGVALLPFVDETRLLA 686
Query: 597 QTKKLEVFLTEEELFRNSVMLDLLYV---HPQHPLYQQIT 633
+ + LT EE RN+ + +++ H +QQ+
Sbjct: 687 TLQSVYPTLTAEEKQRNTRGPNRIFIGRNHKSFEFFQQVA 726
>gi|71024163|ref|XP_762311.1| hypothetical protein UM06164.1 [Ustilago maydis 521]
gi|74698979|sp|Q4P149.3|XRN2_USTMA RecName: Full=5'-3' exoribonuclease 2
gi|46101835|gb|EAK87068.1| hypothetical protein UM06164.1 [Ustilago maydis 521]
Length = 1233
Score = 449 bits (1156), Expect = e-123, Method: Compositional matrix adjust.
Identities = 225/453 (49%), Positives = 304/453 (67%), Gaps = 7/453 (1%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQV----DGEGVARPVDVSKPNPNGMEFDNLYLDM 56
MGVPA +RWL+ +YP + V EEDP+ DG + P+D S PNPNG EFD LYLDM
Sbjct: 1 MGVPALFRWLSKKYPRIVSSVQEEDPKTAPGPDGTEITLPLDTSTPNPNGEEFDCLYLDM 60
Query: 57 NGIIHPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQR 116
NGI+HPC HP+GKPAP + +++ +F Y + + +VRPR+LL +AIDGVAPRAKMNQQR
Sbjct: 61 NGIVHPCTHPEGKPAPETEEEMMVEVFAYTERVVNMVRPRRLLMMAIDGVAPRAKMNQQR 120
Query: 117 TRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPE--TCDSNVITPGTQFMAVLSAA 174
+RRFRAAK+A E EE+ E++ G + EK DSN ITPGT FM +L+A+
Sbjct: 121 SRRFRAAKEAREKHEEEQAALAEWKAKGLGATDDEKKSKRAWDSNAITPGTPFMDLLAAS 180
Query: 175 LQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLD 234
L+Y++ ++N PGW+ +VI+SDA+VPGEGEHKIM +IR QR+ P DPNT+H +YGLD
Sbjct: 181 LRYWVAQKINSDPGWKDIQVIISDASVPGEGEHKIMEHIRRQRSHPEHDPNTKHVIYGLD 240
Query: 235 ADLIMLSLATHEIHFSILRE-VITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVD 293
ADLIMLSLATHE +F +LRE V + + C +CGQ GH AA C G + +
Sbjct: 241 ADLIMLSLATHEPYFKVLREDVFAADNKPKTCNLCGQPGHFAASCTGAAKKKSGQHDEIA 300
Query: 294 DTPIHKKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPT 353
TP KK + FL++ LREYL+ EL+IP PF + ER +DD+VFL FFVGNDFLPH+P+
Sbjct: 301 PTPPEKKPFIFLDVATLREYLEVELNIPQLPFAFDLERAIDDWVFLIFFVGNDFLPHLPS 360
Query: 354 LEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQ 413
LEIR+GAI+ L+ ++++E AMGGYLT+ G V L R + + +A ED+IF++R +
Sbjct: 361 LEIRDGAIDTLLRIWKKELPAMGGYLTNHGRVELGRAQLILSGLASEEDEIFRRRKEDED 420
Query: 414 AYEYNEAMKLNARRESSEELLQAPVAVADTVKL 446
E N + ++ +EL Q V++
Sbjct: 421 RRETNRKRREEMQQRRDKELDQGNFGNGSMVEV 453
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 104/225 (46%), Positives = 142/225 (63%), Gaps = 4/225 (1%)
Query: 442 DTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFY 501
DTVK+ EPGY+ERYY +KF + + ++ VV Y+EGLCWV YYYQ V SWQW+Y
Sbjct: 661 DTVKMWEPGYRERYYKEKFGVDLSDT--DFRRSVVKSYIEGLCWVLAYYYQGVPSWQWYY 718
Query: 502 PYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPI 561
P+H++PFA+D +DL L+I F LG PF+PF+QLMG LPA S +++P + LMT+ S I
Sbjct: 719 PFHFSPFAADFEDLESLDIQFQLGSPFKPFEQLMGVLPADSRASIPPAFHPLMTESDSDI 778
Query: 562 YKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLY 621
FYP +F+IDMNGK+ AWQGV LPFIDEK LL K+ L+E+E+ RN + L+
Sbjct: 779 IDFYPSEFEIDMNGKKMAWQGVALLPFIDEKRLLDALKERYPLLSEDEVRRNGFGNNTLF 838
Query: 622 VHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVNA--SGGMNGYI 664
V + LY + + + VN SGG+ G++
Sbjct: 839 VGNESRLYDFLCEEIYAKKRTTDDGETPKRVAVNPALSGGITGFV 883
>gi|259016407|sp|Q60SG7.2|XRN2_CAEBR RecName: Full=5'-3' exoribonuclease 2 homolog
Length = 976
Score = 449 bits (1155), Expect = e-123, Method: Compositional matrix adjust.
Identities = 231/426 (54%), Positives = 293/426 (68%), Gaps = 8/426 (1%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPAF+RWL +YP ++V+ ED Q +G PVD ++PNPN EFDNLYLDMNGII
Sbjct: 1 MGVPAFFRWLTKKYPATVVNA-NEDRQRGVDGRRVPVDCTQPNPNFQEFDNLYLDMNGII 59
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ +PAP + D++F IF+YID IF +VRPR+LLY+AIDGVAPRAKMNQQR+RRF
Sbjct: 60 HPCTHPEDRPAPKNEDEMFALIFEYIDRIFSIVRPRRLLYMAIDGVAPRAKMNQQRSRRF 119
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPET---CDSNVITPGTQFMAVLSAALQY 177
RA+K+ AE A E R+ G + K+K E DSN ITPGT FMA L+ AL+Y
Sbjct: 120 RASKEMAEKAASIEEQRRRLIAEGIAVPQKKKDEEEAHFDSNCITPGTPFMARLADALRY 179
Query: 178 FIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADL 237
+I R+ P W ++ILSDANVPGEGEHKIM YIR QR P DPNT HCL G DADL
Sbjct: 180 YIHDRVTNDPAWANIEIILSDANVPGEGEHKIMDYIRKQRGNPAHDPNTVHCLCGADADL 239
Query: 238 IMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPI 297
IML +ATHE +F+I+RE +P Q C +CGQ GH EC G +N D P
Sbjct: 240 IMLGIATHEANFNIIREEF-VPNQPRACELCGQYGHELKECRG--AENDTDLGDEYCKPE 296
Query: 298 HKKK-YQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEI 356
++K + FL I VLREYL+ E+ +PN PF N ER +DD+VFLCFFVGNDFLPH+P+LEI
Sbjct: 297 QREKNFIFLRIPVLREYLEKEMAMPNLPFQFNLERALDDWVFLCFFVGNDFLPHLPSLEI 356
Query: 357 REGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYE 416
REGAI+ L+ +Y+ M GYLT G LDRVE ++ + ED+IF++R + ++ ++
Sbjct: 357 REGAIDRLIKLYKEMVYEMKGYLTKDGIPELDRVEMIMRGLGKVEDEIFKRRQQDEERFK 416
Query: 417 YNEAMK 422
N+ K
Sbjct: 417 ENQKNK 422
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 93/220 (42%), Positives = 136/220 (61%), Gaps = 13/220 (5%)
Query: 425 ARRESSEELLQAPVAVADT-------VKLGEPGYKERYYADKFEISNPEEIDKVKKDVVL 477
A +ES + + P+ + D ++L E G+KERYY KF++ + +++D + V
Sbjct: 510 AAQESRKRKAEQPIIITDEDEEPKDDIRLYESGWKERYYRAKFDVGS-DDVD-FRHRVAW 567
Query: 478 KYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDLEITFFL-GEPFRPFDQLMG 536
YVEGLCWV RYYYQ SW W++PYHYAPFASD + + + + F +PF P +QLM
Sbjct: 568 AYVEGLCWVLRYYYQGCSSWDWYFPYHYAPFASDFETVGEFKPDFTRPTKPFNPLEQLMS 627
Query: 537 TLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLR 596
PAAS LP +++ LMT+ SPI YP DF+ID+NGK++AWQGV LPF+DE+ LL
Sbjct: 628 VFPAASKQHLPVEWQKLMTEDESPIIDLYPADFRIDLNGKKYAWQGVALLPFVDEQRLLE 687
Query: 597 QTKKLEVFLTEEELFRNSVMLDLLYV---HPQHPLYQQIT 633
K + LT+EE +RN+ + +++ H +QQ+
Sbjct: 688 TLKSVYPTLTDEEKYRNTRGPNRIFIGRNHKSFAFFQQVA 727
>gi|338719282|ref|XP_001489345.3| PREDICTED: 5'-3' exoribonuclease 2 isoform 1 [Equus caballus]
Length = 874
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 260/621 (41%), Positives = 352/621 (56%), Gaps = 71/621 (11%)
Query: 81 SIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRFRAAKDAAEAEAEEERLRKEF 140
+IF+YID +F +VRPR+LLY+AIDGVAPRAKMNQQR+RRFRA+K+ EA E++R+R+E
Sbjct: 4 AIFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRFRASKEGMEAAVEKQRVREEI 63
Query: 141 EEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQARLNQIPGWQFTKVILSDAN 200
G L +E E DSN ITPGT+FM L+ L+Y+I RLN PGW+ VILSDA+
Sbjct: 64 LAKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIADRLNNDPGWKNLTVILSDAS 123
Query: 201 VPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIMLSLATHEIHFSILREVITLPG 260
PGEGEHKIM YIR QR P DPNT HCL G DADLIML LATHE +F+I+RE P
Sbjct: 124 APGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLGLATHEPNFTIIREEFK-PN 182
Query: 261 QQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDT-PIHKKKYQFLNIWVLREYLQYELD 319
+ + C +C Q GH +C G P + + + D+ P + ++ FL + VLREYL+ EL
Sbjct: 183 KPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEGEFIFLRLNVLREYLERELT 242
Query: 320 IPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHVYRREFTAMGGYL 379
+ + PF + ER +DD+VF+CFFVGNDFLPH+P+LEIREGAI+ L+++Y+ GGYL
Sbjct: 243 MASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREGAIDRLVNIYKNVVHKTGGYL 302
Query: 380 TDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYEYNEAM------------------ 421
T++G V L RV+ + +V ED IF+KR + ++ +
Sbjct: 303 TESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSFRRRQKEKRKRMKRDQPAFTPGGIL 362
Query: 422 ---KLNARRESSEELLQAPVAVADTVKLGEPGYKERYYADKFEI-SNPEEIDKVKK---- 473
L +R ++ P A +++ F +P I +K+
Sbjct: 363 TPHALGSRNSPGSQVASNPRQAAYEMRMQNNSSPSVSPNASFTSDGSPSPIGGIKRKAED 422
Query: 474 --------DVVLKYVEGLCWVCRYY--------------------YQDVCSWQWFYPYH- 504
D V + G W RYY Y + W Y Y
Sbjct: 423 SDSEPEPEDNVRLWEAG--WKQRYYKNKFDVDAADEKFRRKVVQSYVEGLCWVLRYYYQG 480
Query: 505 ------YAPF-----ASDLKDLSDLEITFFLG-EPFRPFDQLMGTLPAASSSALPEKYRN 552
Y PF ASD + ++D+ F G +PF+P +QLMG PAAS + LP +R
Sbjct: 481 CASWKWYYPFHYAPFASDFEGIADMPSDFEKGTKPFKPLEQLMGVFPAASGNFLPPSWRK 540
Query: 553 LMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFR 612
LM+DP S I FYP DF ID+NGK++AWQGV LPF+DE+ L +++ LT EE R
Sbjct: 541 LMSDPDSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEETRR 600
Query: 613 NSVMLDLLYVHPQHPLYQQIT 633
NS+ D+L+V HPL+ I
Sbjct: 601 NSLGGDVLFVGKHHPLHDFIV 621
>gi|115492077|ref|XP_001210666.1| 5'-3' exoribonuclease 2 [Aspergillus terreus NIH2624]
gi|114197526|gb|EAU39226.1| 5'-3' exoribonuclease 2 [Aspergillus terreus NIH2624]
Length = 1022
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 220/438 (50%), Positives = 299/438 (68%), Gaps = 10/438 (2%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDP-QVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGI 59
MGVPA +RWL+++YP I V+EE P +V+GE V PVD ++PNPNG E DNLYLDMNGI
Sbjct: 1 MGVPALFRWLSNKYPKIISSVIEERPYEVNGEEV--PVDTTRPNPNGEEMDNLYLDMNGI 58
Query: 60 IHPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRR 119
+HPC HP+GKP P + ++ IF Y D + +VRPRKLL +A+DGVAPRAKMNQQR RR
Sbjct: 59 VHPCTHPEGKPPPVNEQEMMLEIFKYTDRVVNMVRPRKLLMIAVDGVAPRAKMNQQRARR 118
Query: 120 FRAAKDAAEAEAEEERLRK-----EFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAA 174
FR+A++A EA+ ++E RK +A + L + +T DSNVITPGT FM +L+A+
Sbjct: 119 FRSAQEAKEADEKKEEFRKLQAKQNGNKADQDLQEEVIQKTWDSNVITPGTPFMDILAAS 178
Query: 175 LQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLD 234
L+Y+I +LN P W+ K+I+SDA VPGEGEHKIM ++R QR P DPNTRH +YGLD
Sbjct: 179 LRYWIAYKLNTDPAWEKLKIIISDATVPGEGEHKIMEFVRSQRADPEHDPNTRHVIYGLD 238
Query: 235 ADLIMLSLATHEIHFSILRE-VITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVD 293
ADLIML LATHE +F +LRE V + C +CGQVGH A EC G+ + +++
Sbjct: 239 ADLIMLGLATHEPYFRVLREDVFFQESKARTCHLCGQVGHKAEECRGRAKEKSGEFDEKQ 298
Query: 294 DTPIHKKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPT 353
+ K + +LN+ +LREYL EL +PN PFP + ER +DD+VF+CFFVGNDFLPH+P+
Sbjct: 299 NG-TSLKPFIWLNVSILREYLAVELHVPNQPFPFDLERALDDWVFMCFFVGNDFLPHLPS 357
Query: 354 LEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQ 413
L+IRE I+ L+ ++R MGGYLT G V + + +Q +A ED IF++R ++++
Sbjct: 358 LDIRENGIDTLIAIWRDNIPVMGGYLTKDGHVDFKKAQLILQGLAKQEDAIFRRRRQVEE 417
Query: 414 AYEYNEAMKLNARRESSE 431
NE + ++ E
Sbjct: 418 RKAANEKRRKQEAQDREE 435
Score = 214 bits (546), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 112/253 (44%), Positives = 160/253 (63%), Gaps = 8/253 (3%)
Query: 442 DTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFY 501
DTV+L E GY +RYY KF + +PE+ + + V Y EGL WV YY+Q SW W+Y
Sbjct: 578 DTVRLWEEGYADRYYEQKFGV-DPED-KEFRHKVARAYAEGLAWVLLYYFQGCPSWTWYY 635
Query: 502 PYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPI 561
PYHYAPFA+D D++D+ +F G PF+PF+QLMG LPA+S+ A+PE + +LM DP S I
Sbjct: 636 PYHYAPFAADFVDIADMIPSFEKGTPFKPFEQLMGVLPASSNHAIPEVFHDLMKDPDSEI 695
Query: 562 YKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLY 621
FYP DF +D+NGK+FAWQGVV LPFIDEK LL +K L++EE RN V D+L
Sbjct: 696 IDFYPEDFAVDLNGKKFAWQGVVLLPFIDEKRLLNAMEKKYPLLSDEERLRNCVGRDVLL 755
Query: 622 VHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVNASGGMNGYIWLCERNGLRSIIPSPVK 681
+ +HPLYQ + Q P+ +++++ S G+ G + E S + S ++
Sbjct: 756 ISDRHPLYQDLVGNFYSKKQGAPK----YKLNMRVSEGLAGKVEKDESYIPHSSLVSSLE 811
Query: 682 --GLPDIERNQAM 692
G+P +E ++++
Sbjct: 812 EYGMPTLEEDRSL 824
>gi|348531416|ref|XP_003453205.1| PREDICTED: 5'-3' exoribonuclease 1 [Oreochromis niloticus]
Length = 1692
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 263/705 (37%), Positives = 383/705 (54%), Gaps = 113/705 (16%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP FYRW+++RYP + +VV+E Q+ EFDN YLDMNGII
Sbjct: 1 MGVPKFYRWISERYPC-LSEVVKEH-QIP------------------EFDNFYLDMNGII 40
Query: 61 HPCFHPDGKPAP--TSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C HP+ + S + +F IF Y++ +F +++PRK+ ++A+DGVAPRAKMNQQR R
Sbjct: 41 HQCSHPNDEDVHFRISEEKIFADIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RFR+AK+A EE+++K ++ G++L + + DSN ITPGT+FMA L L+YF
Sbjct: 101 RFRSAKEA------EEKIKKALDK-GEVLPTEAR---FDSNCITPGTEFMARLQEQLKYF 150
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
+ +L+ WQ KV LS PGEGEHKIM +IR + P DPNTRHCLYGLDADLI
Sbjct: 151 VHNKLSNDKLWQNVKVYLSGHETPGEGEHKIMEFIRSENTKPNHDPNTRHCLYGLDADLI 210
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
ML L +HE +FS+LRE + G++ + + T
Sbjct: 211 MLGLTSHEPNFSLLREEVRFGGKKSQKRI---------------------------TAPE 243
Query: 299 KKKYQFLNIWVLREYLQYELDIPNPPFPINF--ERIVDDFVFLCFFVGNDFLPHMPTLEI 356
+ + L++ ++REY+ YE ++ ER++DD++ + F VGNDF+PH+P L I
Sbjct: 244 ETTFHLLHLSLMREYIDYEFSELKNKMGSDYDLERVIDDWILMGFLVGNDFIPHLPNLHI 303
Query: 357 REGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQK--------R 408
A+ LL Y ++GGYL + G + L EK+++ +A ++ + F +
Sbjct: 304 NHDALPLLYKTYISVLPSLGGYLNENGHLNLRNFEKYLEKLAEFDREHFNEVFVDLKWFE 363
Query: 409 TRIQQAYEYNEAMKLNARRESSEELLQ-----APVAVADTVKLGEPG------------- 450
+++ Y NEA L A +E++ + + A + T G
Sbjct: 364 SKVGNKY-LNEAAGLAAEKEAASKDARKNEDSALCLASQTTSEKITGEEKAAAAVDEEEE 422
Query: 451 ----------YKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWF 500
YK YY +K + D+ + YVEG+ W+ YYY V SW W+
Sbjct: 423 DDIFETEFRQYKRTYYMNKIGVDVVS--DEFLANQAKCYVEGIQWILHYYYHGVQSWSWY 480
Query: 501 YPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSP 560
YPYHYAP+ SD++++S L++TF LG+PF PF QL+ LPAAS LPE YR+LMT SSP
Sbjct: 481 YPYHYAPYLSDIRNVSGLKLTFELGQPFMPFQQLLAVLPAASMELLPECYRHLMTSESSP 540
Query: 561 IYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVM---- 616
I +YP DF+ D+NGK+ W+ VV +PFIDE+ LL + LT+EE RN
Sbjct: 541 IIGYYPLDFKTDLNGKQQEWEAVVLIPFIDERCLLAAMEPCNSKLTKEEKARNCHTECAV 600
Query: 617 ------LDLLYVHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVN 655
+D Y P L+ I ++C + P D AW++ ++
Sbjct: 601 YSYDREMDFAYASPLPQLFPDI-VHCHVRTAHIPMD--AWQVSLD 642
>gi|225560323|gb|EEH08605.1| 5'->3' exoribonculease Dhp1 [Ajellomyces capsulatus G186AR]
Length = 1042
Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust.
Identities = 225/426 (52%), Positives = 297/426 (69%), Gaps = 12/426 (2%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQ-VDGEGVARPVDVSKPNPNGMEFDNLYLDMNGI 59
MGVPA +RWL+ +YP I VVEE PQ +DGE V PVD +KPNPNG E DNLYLDMNGI
Sbjct: 1 MGVPALFRWLSSKYPKIISPVVEEIPQEIDGEEV--PVDTTKPNPNGEEMDNLYLDMNGI 58
Query: 60 IHPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRR 119
+HPC HPDGKP P + +D+ IF Y D + +VRPRKLL +A+DGVAPRAKMNQQR+RR
Sbjct: 59 VHPCTHPDGKPPPETEEDMMLEIFKYTDRVVNMVRPRKLLMIAVDGVAPRAKMNQQRSRR 118
Query: 120 FRAAKDAAEAEAEEER----LRKE-FEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAA 174
FR+A++A EA+ ++E LRK+ + G+ L + +T DSNVITPGT FM +L+AA
Sbjct: 119 FRSAQEAKEADEKKEEFAKLLRKQNGSKGGEGLVEEVITKTWDSNVITPGTPFMDILAAA 178
Query: 175 LQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLD 234
L+Y++ +LN P W+ K+I+SDA VPGEGEHKIM +IR QR+ DPNTRH +YGLD
Sbjct: 179 LRYWVAYKLNTDPAWEKLKIIISDATVPGEGEHKIMEFIRSQRSCAEHDPNTRHVIYGLD 238
Query: 235 ADLIMLSLATHEIHFSILRE-VITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWN-GV 292
ADLIML LATHE HF +LRE V + C +CGQ GH+A C G + +++
Sbjct: 239 ADLIMLGLATHEPHFRVLREDVFFQESKGRTCHLCGQTGHIAEACKGTAKEKNGEFDEKG 298
Query: 293 DDTPIHKKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMP 352
+P+ K + +L++ VLREYL E+ +P PFP + ER +DD+VF+CFFVGNDFLPH+P
Sbjct: 299 KGSPL--KPFIWLHVSVLREYLAVEMHVPQQPFPFDLERALDDWVFMCFFVGNDFLPHLP 356
Query: 353 TLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQ 412
+L+IRE I+ L+ ++R AM GYLT G V LDR + +Q +A ED IF++R + +
Sbjct: 357 SLDIRENGIDTLIAIWRDNIPAMNGYLTKDGHVDLDRAQLILQGLAKQEDAIFRRRRQTE 416
Query: 413 QAYEYN 418
+ N
Sbjct: 417 ERKNAN 422
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 108/223 (48%), Positives = 147/223 (65%), Gaps = 6/223 (2%)
Query: 442 DTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFY 501
DTV+L E GY +RYY KF + +P++I+ + V YVEGL WV YY+Q SW W+Y
Sbjct: 569 DTVRLWEDGYADRYYEQKFHV-DPKDIE-FRHKVARAYVEGLAWVLLYYFQGCPSWTWYY 626
Query: 502 PYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPI 561
PYHYAPFA+D DL +++I F G PF+PF+QLMG LPAAS+ A+PE + +LM+DP S I
Sbjct: 627 PYHYAPFAADFVDLGNMKIEFNKGAPFKPFEQLMGVLPAASNHAIPEVFHDLMSDPESEI 686
Query: 562 YKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLY 621
FYP DF ID+NGK+FAWQGV LPFIDEK LL +K L+ EE RN+ ++L+
Sbjct: 687 IDFYPEDFPIDLNGKKFAWQGVALLPFIDEKRLLLAMEKRYPLLSNEEHARNTTGREVLF 746
Query: 622 VHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVNASGGMNGYI 664
+ +HPLY+ +T QL P ++++ S G+ G +
Sbjct: 747 LSDRHPLYENLTANFYSKKQLAP----TLKLNMRVSEGLGGKV 785
>gi|402883355|ref|XP_003905185.1| PREDICTED: 5'-3' exoribonuclease 2 isoform 3 [Papio anubis]
Length = 874
Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust.
Identities = 275/683 (40%), Positives = 373/683 (54%), Gaps = 82/683 (12%)
Query: 81 SIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRFRAAKDAAEAEAEEERLRKEF 140
+IF+YID +F +VRPR+LLY+AIDGVAPRAKMNQQR+RRFRA+K+ EA E++R+R+E
Sbjct: 4 AIFEYIDRLFSIVRPRRLLYMAIDGVAPRAKMNQQRSRRFRASKEGMEAAVEKQRVREEI 63
Query: 141 EEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQARLNQIPGWQFTKVILSDAN 200
G L +E E DSN ITPGT+FM L+ L+Y+I RLN PGW+ VILSDA+
Sbjct: 64 LAKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIADRLNNDPGWKNLTVILSDAS 123
Query: 201 VPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIMLSLATHEIHFSILREVITLPG 260
PGEGEHKIM YIR QR P DPNT HCL G DADLIML LATHE +F+I+RE P
Sbjct: 124 APGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLGLATHEPNFTIIREEFK-PN 182
Query: 261 QQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDT-PIHKKKYQFLNIWVLREYLQYELD 319
+ + C +C Q GH +C G P + + + D+ P + ++ FL + VLREYL+ EL
Sbjct: 183 KPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEGEFIFLRLNVLREYLERELT 242
Query: 320 IPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHVYRREFTAMGGYL 379
+ + PF + ER +DD+VF+CFFVGNDFLPH+P+LEIRE AI+ L+++Y+ GGYL
Sbjct: 243 MASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIRENAIDRLVNIYKNVVHKTGGYL 302
Query: 380 TDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYEYNEAM------------------ 421
T++G V L RV+ + +V ED IF+KR + ++ +
Sbjct: 303 TESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSFRRRQKEKRKRMKRDQPAFTPSGIL 362
Query: 422 ---KLNARRESSEELLQAPVAVADTVKLGEPGYKERYYADKFEI-SNPEEIDKVKK---- 473
L +R ++ P A +++ F +P I +K+
Sbjct: 363 TPHALGSRNSPGSQVASNPRQAAYEMRMQNNSSPSISPNTSFTSDGSPSPIGGIKRKAED 422
Query: 474 --------DVVLKYVEGLCWVCRYY--------------------YQDVCSWQWFYPYH- 504
D V + G W RYY Y + W Y Y
Sbjct: 423 SDSEPEPEDNVRLWEAG--WKQRYYKNKFDVDAADEKFRRKVVQSYVEGLCWVLRYYYQG 480
Query: 505 ------YAPF-----ASDLKDLSDLEITFFLG-EPFRPFDQLMGTLPAASSSALPEKYRN 552
Y PF ASD + ++D+ F G +PF+P +QLMG PAAS + LP +R
Sbjct: 481 CASWKWYYPFHYAPFASDFEGIADMPSDFEKGTKPFKPLEQLMGVFPAASGNFLPPSWRK 540
Query: 553 LMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFR 612
LM+DP S I FYP DF ID+NGK++AWQGV LPF+DE+ L +++ LT EE R
Sbjct: 541 LMSDPDSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEETRR 600
Query: 613 NSVMLDLLYVHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDV--NASGGMNGYIWLCERN 670
NS+ D+L+V HPL+ I Q P +DV G+ G L E
Sbjct: 601 NSLGGDVLFVGKHHPLHDFILELYQTGSTEP--------VDVPPELCHGIQGKFSLDEEA 652
Query: 671 GL-RSIIPSPVKGLPDIERNQAM 692
L I+ SPV L D+ +N +
Sbjct: 653 ILPDQIVCSPVPMLRDLTQNTVV 675
>gi|240278750|gb|EER42256.1| 5'->3' exoribonculease Dhp1 [Ajellomyces capsulatus H143]
gi|325090340|gb|EGC43650.1| 5'-3' exoribonculease Dhp1 [Ajellomyces capsulatus H88]
Length = 1042
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 225/426 (52%), Positives = 297/426 (69%), Gaps = 12/426 (2%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQ-VDGEGVARPVDVSKPNPNGMEFDNLYLDMNGI 59
MGVPA +RWL+ +YP I VVEE PQ +DGE V PVD +KPNPNG E DNLYLDMNGI
Sbjct: 1 MGVPALFRWLSSKYPKIISPVVEEIPQEIDGEEV--PVDTTKPNPNGEEMDNLYLDMNGI 58
Query: 60 IHPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRR 119
+HPC HPDGKP P + +D+ IF Y D + +VRPRKLL +A+DGVAPRAKMNQQR+RR
Sbjct: 59 VHPCTHPDGKPPPETEEDMMLEIFKYTDRVVNMVRPRKLLMIAVDGVAPRAKMNQQRSRR 118
Query: 120 FRAAKDAAEAEAEEER----LRKE-FEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAA 174
FR+A++A EA+ ++E LRK+ + G+ L + +T DSNVITPGT FM +L+AA
Sbjct: 119 FRSAQEAKEADEKKEEFAKLLRKQNGSKGGEGLVEEVITKTWDSNVITPGTPFMDILAAA 178
Query: 175 LQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLD 234
L+Y++ +LN P W+ K+I+SDA VPGEGEHKIM +IR QR+ DPNTRH +YGLD
Sbjct: 179 LRYWVAYKLNTDPAWEKLKIIISDATVPGEGEHKIMEFIRSQRSCAEHDPNTRHVIYGLD 238
Query: 235 ADLIMLSLATHEIHFSILRE-VITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWN-GV 292
ADLIML LATHE HF +LRE V + C +CGQ GH+A C G + +++
Sbjct: 239 ADLIMLGLATHEPHFRVLREDVFFQESKGRTCHLCGQTGHIAEACKGTAKEKNGEFDEKG 298
Query: 293 DDTPIHKKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMP 352
+P+ K + +L++ VLREYL E+ +P PFP + ER +DD+VF+CFFVGNDFLPH+P
Sbjct: 299 KGSPL--KPFIWLHVSVLREYLAVEMHVPQQPFPFDLERALDDWVFMCFFVGNDFLPHLP 356
Query: 353 TLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQ 412
+L+IRE I+ L+ ++R AM GYLT G V LDR + +Q +A ED IF++R + +
Sbjct: 357 SLDIRENGIDTLIAIWRDNIPAMNGYLTKDGHVDLDRAQLILQGLAKQEDAIFRRRRQTE 416
Query: 413 QAYEYN 418
+ N
Sbjct: 417 ERKNAN 422
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 113/253 (44%), Positives = 159/253 (62%), Gaps = 8/253 (3%)
Query: 442 DTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFY 501
DTV+L E GY +RYY KF + +P++I+ + V YVEGL WV YY+Q SW W+Y
Sbjct: 569 DTVRLWEDGYADRYYEQKFHV-DPKDIE-FRHKVARAYVEGLAWVLLYYFQGCPSWTWYY 626
Query: 502 PYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPI 561
PYHYAPFA+D DL +++I F G PF+PF+QLMG LPAAS+ A+PE + +LM+DP S I
Sbjct: 627 PYHYAPFAADFVDLGNMKIEFNKGAPFKPFEQLMGVLPAASNHAIPEVFHDLMSDPESEI 686
Query: 562 YKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLY 621
FYP DF ID+NGK+FAWQGV LPFIDEK LL +K L+ EE RN+ ++L+
Sbjct: 687 IDFYPEDFPIDLNGKKFAWQGVALLPFIDEKRLLLAMEKRYPLLSNEEHARNTTGREILF 746
Query: 622 VHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVNASGGMNGYIWLCERNGLRSIIPSPVK 681
+ +HPLY+ +T QL P ++++ S G+ G + + S + P
Sbjct: 747 LSDRHPLYENLTANFYSKKQLAP----TLKLNMRVSEGLGGKVGRNDAYVPHSSLVPPFD 802
Query: 682 --GLPDIERNQAM 692
GLP ++ + ++
Sbjct: 803 NGGLPTLDEDHSI 815
>gi|34365218|emb|CAE45950.1| hypothetical protein [Homo sapiens]
Length = 1706
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 263/707 (37%), Positives = 378/707 (53%), Gaps = 113/707 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP FYRW+++RYP + +VV+E Q+ EFDNLYLDMNGII
Sbjct: 1 MGVPKFYRWISERYPC-LSEVVKEH-QIP------------------EFDNLYLDMNGII 40
Query: 61 HPCFHPDGKPAP--TSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C HP+G S D +F IF Y++ +F +++PRK+ ++A+DGVAPRAKMNQQR R
Sbjct: 41 HQCSHPNGDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RFR+AK+A E++++K E+ G+ L + + DSN ITPGT+FMA L L+YF
Sbjct: 101 RFRSAKEA------EDKIKKAIEK-GETLPTEAR---FDSNCITPGTEFMARLHEHLKYF 150
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
+ +++ WQ + S PGEGEHKIM +IR ++ P DPNTRHCLYGLDADLI
Sbjct: 151 VNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLI 210
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
ML L +HE HFS+LRE + G++ + VC ++T H
Sbjct: 211 MLGLTSHEAHFSLLREEVRFGGKKTQ-RVCAP----------------------EETTFH 247
Query: 299 KKKYQFLNIWVLREYLQYELDI--PNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEI 356
L++ ++REY+ YE + F + ERI+DD++ + F VGNDF+PH+P L I
Sbjct: 248 -----LLHLSLMREYIDYEFSVLKEKITFKYDIERIIDDWILMGFLVGNDFIPHLPHLHI 302
Query: 357 REGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQK--------R 408
A+ LL Y +GGY+ ++G + L R EK++ ++ ++ + F +
Sbjct: 303 NHDALPLLYGTYVTILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSEVFVDLKWFE 362
Query: 409 TRIQQAY-------------EYNEAMKLNARRES---------------SEELLQAPVAV 440
+++ Y Y E KL + S S++ L+
Sbjct: 363 SKVGNKYLNEAAGVAAEEARNYKEKKKLKGQENSLCWTALDKNEGEMITSKDNLEDETED 422
Query: 441 ADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWF 500
D + YK YY K + D D YV+ + W+ YYY V SW W+
Sbjct: 423 DDLFETEFRQYKRTYYMTKMGVDVVS--DDFLADQAACYVQAIQWILHYYYHGVQSWSWY 480
Query: 501 YPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSP 560
YPYHYAPF SD+ ++S L+I F LG+PF+PF+QL+ LPAAS + LP Y++LMT+ SP
Sbjct: 481 YPYHYAPFLSDIHNISTLKIHFELGKPFKPFEQLLAVLPAASKNLLPACYQHLMTNEDSP 540
Query: 561 IYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVM---- 616
I ++YPPDF+ D+NGK+ W+ VV +PFIDEK LL + L +EE RN
Sbjct: 541 IIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEERKRNQHSECLM 600
Query: 617 ------LDLLYVHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVNAS 657
+ +Y P + I C Y + AW +D+N +
Sbjct: 601 CWYDRDTEFIYPSPWPEKFPAIERCCTRYKIISLD---AWRVDINKN 644
>gi|405973506|gb|EKC38214.1| 5'-3' exoribonuclease 1 [Crassostrea gigas]
Length = 1857
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 262/667 (39%), Positives = 367/667 (55%), Gaps = 105/667 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP FYRW+++RYP + + V+E P EFDNLYLDMNGII
Sbjct: 1 MGVPKFYRWVSERYPC-LSETVKE--------------YQIP-----EFDNLYLDMNGII 40
Query: 61 HPCFHP--DGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C HP D + + +FK IF Y++ +F +++PRK+ ++AIDGVAPRAKMNQQR R
Sbjct: 41 HVCSHPEDDNPHFRITEEKIFKDIFHYLEFLFRMIKPRKVFFMAIDGVAPRAKMNQQRGR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RFR+A+ EAEA E + R E+G+ L +++ DSN ITPGT+FM L L+YF
Sbjct: 101 RFRSAR---EAEALERKAR----ESGETLPTEKR---FDSNCITPGTEFMVKLHEQLKYF 150
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
+ ++++ P W V LS PGEGEHK+M +IR Q++ P +D NTRHCLYGLDADL+
Sbjct: 151 VTSKISSDPLWHGVDVYLSGHETPGEGEHKVMDFIRCQKSKPDYDANTRHCLYGLDADLM 210
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
ML LATHE HFS+LRE + G++ D N TP
Sbjct: 211 MLGLATHEPHFSLLREEVRFGGKK-------------------------DRNKRPATP-E 244
Query: 299 KKKYQFLNIWVLREYLQYELDI--PNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEI 356
+ + L++ + REYL +E PF + E I+DD++ + F VGNDF+PH+P L I
Sbjct: 245 ETTFHLLHLSLFREYLDFEFSFLKDKLPFGYSLENIIDDWILMGFLVGNDFIPHLPHLHI 304
Query: 357 REGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYE 416
+ A+ LL Y GGY+ + G + L+R +++++ +A ++ F + + +E
Sbjct: 305 QHDALPLLWKTYMTILPECGGYMNEGGHLNLERFDRYMKELAKFDLDKFSEVFTDLKWFE 364
Query: 417 -------YNEAMKLNARRESSEELLQAPV--AVADTVKLGEPG----------------- 450
E M+ N+R+ + L Q + ++ ++ G+P
Sbjct: 365 GKTAERSEKEQMEGNSRKNKKDNLNQFLLLESLDNSEVEGQPSENQEKAQLDEDTEDLAE 424
Query: 451 ---------------YKERYYADKFEISNPEEIDK-VKKDVVLKYVEGLCWVCRYYYQDV 494
+K YY K E E++DK V +D +YV + W+ YY++ V
Sbjct: 425 EEDEDSDTFDEEFRLHKRNYYMTKLEY---EDVDKQVLRDQCEEYVRAIQWILLYYFEGV 481
Query: 495 CSWQWFYPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLM 554
SW WFYP+HYAPF SD+ D D+EI F +G PF PF QLM LPAAS LPE Y+ LM
Sbjct: 482 PSWSWFYPHHYAPFISDVTDFKDMEIKFEMGSPFLPFQQLMAVLPAASKELLPEPYQKLM 541
Query: 555 TDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNS 614
T SP+ FYP DFQ D+NGK+ W+ VV +PFIDE LL K +E L+ E RN+
Sbjct: 542 TQDISPVIDFYPVDFQTDLNGKQQEWEAVVLIPFIDEARLLEAMKSVENQLSPSEKKRNA 601
Query: 615 VMLDLLY 621
LLY
Sbjct: 602 HGPCLLY 608
>gi|332238208|ref|XP_003268295.1| PREDICTED: 5'-3' exoribonuclease 2 isoform 3 [Nomascus leucogenys]
Length = 874
Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust.
Identities = 275/683 (40%), Positives = 373/683 (54%), Gaps = 82/683 (12%)
Query: 81 SIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRFRAAKDAAEAEAEEERLRKEF 140
+IF+YID +F +VRPR+LLY+AIDGVAPRAKMNQQR+RRFRA+K+ EA E++R+R+E
Sbjct: 4 AIFEYIDRLFSIVRPRRLLYMAIDGVAPRAKMNQQRSRRFRASKEGMEAAVEKQRVREEI 63
Query: 141 EEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQARLNQIPGWQFTKVILSDAN 200
G L +E E DSN ITPGT+FM L+ L+Y+I RLN PGW+ VILSDA+
Sbjct: 64 LAKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIADRLNNDPGWKNLTVILSDAS 123
Query: 201 VPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIMLSLATHEIHFSILREVITLPG 260
PGEGEHKIM YIR QR P DPNT HCL G DADLIML LATHE +F+I+RE P
Sbjct: 124 APGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLGLATHEPNFTIIREEFK-PN 182
Query: 261 QQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDT-PIHKKKYQFLNIWVLREYLQYELD 319
+ + C +C Q GH +C G P + + + D+ P + ++ FL + VLREYL+ EL
Sbjct: 183 KPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEGEFIFLRLNVLREYLERELT 242
Query: 320 IPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHVYRREFTAMGGYL 379
+ + PF + ER +DD+VF+CFFVGNDFLPH+P+LEIRE AI+ L+++Y+ GGYL
Sbjct: 243 MASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIRENAIDRLVNIYKNVVHKTGGYL 302
Query: 380 TDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYEYNEAM------------------ 421
T++G V L RV+ + +V ED IF+KR + ++ +
Sbjct: 303 TESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSFRRRQKEKRKRMKRDQPAFTPSGIL 362
Query: 422 ---KLNARRESSEELLQAPVAVADTVKLGEPGYKERYYADKFEI-SNPEEIDKVKK---- 473
L +R ++ P A +++ F +P I +K+
Sbjct: 363 TPHALGSRNSPGSQVASNPRQAAYEMRMQNNSSPSISPNTSFTSDGSPSPIGGIKRKAED 422
Query: 474 --------DVVLKYVEGLCWVCRYY--------------------YQDVCSWQWFYPYH- 504
D V + G W RYY Y + W Y Y
Sbjct: 423 SDSEPEPEDNVRLWEAG--WKQRYYKNKFDVDAADEKFRRKVVQSYVEGLCWVLRYYYQG 480
Query: 505 ------YAPF-----ASDLKDLSDLEITFFLG-EPFRPFDQLMGTLPAASSSALPEKYRN 552
Y PF ASD + ++D+ F G +PF+P +QLMG PAAS + LP +R
Sbjct: 481 CASWKWYYPFHYAPFASDFEGIADMPSDFEKGTKPFKPLEQLMGVFPAASGNFLPPSWRK 540
Query: 553 LMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFR 612
LM+DP S I FYP DF ID+NGK++AWQGV LPF+DE+ L +++ LT EE R
Sbjct: 541 LMSDPDSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEETRR 600
Query: 613 NSVMLDLLYVHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDV--NASGGMNGYIWLCERN 670
NS+ D+L+V HPL+ I Q P +DV G+ G L E
Sbjct: 601 NSLGGDVLFVGKHHPLHDFILELYQTGSTEP--------VDVPPELCHGIQGRFSLDEEA 652
Query: 671 GL-RSIIPSPVKGLPDIERNQAM 692
L I+ SPV L D+ +N +
Sbjct: 653 ILPDQIVCSPVPMLRDLTQNTVV 675
>gi|126338146|ref|XP_001364729.1| PREDICTED: 5'-3' exoribonuclease 1 isoform 2 [Monodelphis
domestica]
Length = 1700
Score = 447 bits (1149), Expect = e-122, Method: Compositional matrix adjust.
Identities = 265/710 (37%), Positives = 386/710 (54%), Gaps = 124/710 (17%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP FYRW+++RYP + +VV+E Q+ EFDNLYLDMNGII
Sbjct: 1 MGVPKFYRWISERYPC-LSEVVKEH-QIP------------------EFDNLYLDMNGII 40
Query: 61 HPCFHPDGKPAP--TSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C HP+ S D +F IF Y++ +F +++PRK+ ++A+DGVAPRAKMNQQR R
Sbjct: 41 HQCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RFRAAK+A E++++K E+ G++L ++ + DSN ITPGT+FMA L L+YF
Sbjct: 101 RFRAAKEA------EDKIKKALEK-GEILPSEAR---FDSNCITPGTEFMARLHEHLKYF 150
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
+ +++ WQ + LS PGEGEHKIM +IR ++ P DPN RHCLYGLDADLI
Sbjct: 151 VNMKISSDKSWQGVTIYLSGHETPGEGEHKIMEFIRSEKGKPDHDPNIRHCLYGLDADLI 210
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
ML L +HE HFS+LRE + G++ + VC ++T H
Sbjct: 211 MLGLTSHESHFSLLREEVRFGGKKTQ-RVCAP----------------------EETTFH 247
Query: 299 KKKYQFLNIWVLREYLQYELDI--PNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEI 356
L++ ++REY+ YE F + ERI+DD++ + F VGNDF+PH+P L I
Sbjct: 248 -----LLHLSLMREYIDYEFSALKDKISFKYDIERIIDDWILMGFLVGNDFIPHLPHLHI 302
Query: 357 REGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQK--------R 408
A+ LL Y +GGY+ + G + L R EK++ ++ ++ + F +
Sbjct: 303 NHDALPLLYRTYMTVLPELGGYINENGHLNLPRFEKYLIKLSDFDREHFSEVFVDLKWFE 362
Query: 409 TRIQQAY-------------EYNE--------AMKLNARRESSEELLQAPVAVADTVKLG 447
+++ Y Y + +M L A ++ EE++ + + D
Sbjct: 363 SKVGNKYLNEAAGIAAEEAKNYKQKKLKGQENSMCLAALDKTKEEVMTSKSVIED----- 417
Query: 448 EP-----------GYKERYYADKFEISNPEEI--DKVKKDVVLKYVEGLCWVCRYYYQDV 494
EP YK YY K + EI D D YV+ + W+ YYY V
Sbjct: 418 EPEDDDLFETEFRQYKRTYYMTKMGV----EIVSDDFLADQAECYVQAIQWILHYYYHGV 473
Query: 495 CSWQWFYPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLM 554
SW W+YPYHYAP+ SD++++S+L+I F LG+PF PF+QL+ LPAAS LP Y++LM
Sbjct: 474 QSWSWYYPYHYAPYLSDIRNISELKIQFELGKPFMPFEQLLAVLPAASKDLLPGCYQHLM 533
Query: 555 TDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNS 614
T SPI ++YPPDF+ D+NGK+ W+ VV +PFIDE LL+ + +L EEE RN
Sbjct: 534 TSEESPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDETRLLQAMESCHKYLREEEEKRNR 593
Query: 615 VMLDLLYVHPQHPLYQQITLY---------CQLYHQLPPQDRFAWEIDVN 655
L+Y ++ ++ + C H++ D AW +D+N
Sbjct: 594 HSECLMYWFDGDSGFKYLSPWPERFPPIEKCHARHKIISLD--AWHVDIN 641
>gi|169763218|ref|XP_001727509.1| 5'-3' exoribonuclease 2 [Aspergillus oryzae RIB40]
gi|238489103|ref|XP_002375789.1| 5'->3' exoribonculease Dhp1 [Aspergillus flavus NRRL3357]
gi|115311954|sp|Q2UCP5.3|XRN2_ASPOR RecName: Full=5'-3' exoribonuclease 2
gi|83770537|dbj|BAE60670.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220698177|gb|EED54517.1| 5'->3' exoribonculease Dhp1 [Aspergillus flavus NRRL3357]
Length = 1035
Score = 447 bits (1149), Expect = e-122, Method: Compositional matrix adjust.
Identities = 217/427 (50%), Positives = 295/427 (69%), Gaps = 8/427 (1%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDP-QVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGI 59
MGVPA +RWL+++YP I V+EE P +V+GE + PVD ++PNPNG E DNLYLDMNGI
Sbjct: 1 MGVPALFRWLSNKYPKIISPVIEEQPYEVNGEQI--PVDTTRPNPNGEELDNLYLDMNGI 58
Query: 60 IHPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRR 119
+HPC HP+GKP P + ++ IF+Y D + +VRPRKLL +A+DGVAPRAKMNQQR RR
Sbjct: 59 VHPCTHPEGKPPPANEQEMMLEIFNYTDRVVNMVRPRKLLMIAVDGVAPRAKMNQQRARR 118
Query: 120 FRAAKDAAEAEAEEERLRKEFEEAGK---LLSAKEKPETCDSNVITPGTQFMAVLSAALQ 176
FR+A++A EA+ ++E RK+F + K + + +T DSNVITPGT FM +L+A+L+
Sbjct: 119 FRSAQEAKEADEKKEEFRKQFLKKSKGDQEIHEEVIQKTWDSNVITPGTPFMDILAASLR 178
Query: 177 YFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDAD 236
Y+I +LN P W+ K+I+SDA VPGEGEHKIM ++R QR P DPNTRH +YGLDAD
Sbjct: 179 YWIAYKLNTDPAWEKLKIIISDATVPGEGEHKIMEFVRSQRAAPEHDPNTRHVIYGLDAD 238
Query: 237 LIMLSLATHEIHFSILRE-VITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDT 295
LIML LATHE HF +LRE V + C +CGQ GH A EC G+ + ++
Sbjct: 239 LIMLGLATHEPHFRVLREDVFFQESKARTCHLCGQAGHKAEECRGQAKEKNGQFD-EKGK 297
Query: 296 PIHKKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLE 355
K + +LN+ +LREYL EL +P+ PFP + ER +DD+VF+CFFVGNDFLPH+P+L+
Sbjct: 298 GTSLKPFIWLNVSILREYLAVELYVPHQPFPFDLERALDDWVFMCFFVGNDFLPHLPSLD 357
Query: 356 IREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAY 415
IRE I+ L+ ++R MGGYLT G V + + +Q +A ED IF++R ++++
Sbjct: 358 IRENGIDTLIAIWRDNIPVMGGYLTKDGHVEFKKAQLILQGLAKQEDAIFRRRRQVEEKK 417
Query: 416 EYNEAMK 422
NE +
Sbjct: 418 LANEKRR 424
Score = 213 bits (542), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 109/253 (43%), Positives = 160/253 (63%), Gaps = 8/253 (3%)
Query: 442 DTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFY 501
DTV+L E GY +RYY KF + +P++ + + V Y EGL WV YY+Q SW W+Y
Sbjct: 583 DTVRLWEEGYADRYYEQKFGV-DPQD-KEFRHKVARAYAEGLAWVLLYYFQGCPSWNWYY 640
Query: 502 PYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPI 561
PYHYAPFA+D D+ D+E++F G PF+PF+QLMG LPA+S+ A+PE + +LM DP S I
Sbjct: 641 PYHYAPFAADFVDIGDMELSFEKGTPFKPFEQLMGVLPASSNHAIPEVFHDLMQDPESEI 700
Query: 562 YKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLY 621
FYP DF +D+NGK+FAWQGV+ LPFIDEK LL +K L+++E RN+V ++L
Sbjct: 701 IDFYPEDFAVDLNGKKFAWQGVILLPFIDEKRLLAAMEKKYPLLSDDERHRNTVGREVLL 760
Query: 622 VHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVNASGGMNGYIWLCERNGLRSIIPSPVK 681
+ HPLYQ + Q P+ + +++ S G+ G + E S + S ++
Sbjct: 761 LSDGHPLYQDLVANFYSKKQGAPK----YTLNMRVSEGLAGRVERNETYIPHSSLVSSLE 816
Query: 682 --GLPDIERNQAM 692
G+P +E ++++
Sbjct: 817 EYGMPTLEDDRSL 829
>gi|334347265|ref|XP_003341907.1| PREDICTED: 5'-3' exoribonuclease 1 [Monodelphis domestica]
Length = 1713
Score = 447 bits (1149), Expect = e-122, Method: Compositional matrix adjust.
Identities = 265/710 (37%), Positives = 386/710 (54%), Gaps = 124/710 (17%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP FYRW+++RYP + +VV+E Q+ EFDNLYLDMNGII
Sbjct: 1 MGVPKFYRWISERYPC-LSEVVKEH-QIP------------------EFDNLYLDMNGII 40
Query: 61 HPCFHPDGKPAP--TSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C HP+ S D +F IF Y++ +F +++PRK+ ++A+DGVAPRAKMNQQR R
Sbjct: 41 HQCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RFRAAK+A E++++K E+ G++L ++ + DSN ITPGT+FMA L L+YF
Sbjct: 101 RFRAAKEA------EDKIKKALEK-GEILPSEAR---FDSNCITPGTEFMARLHEHLKYF 150
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
+ +++ WQ + LS PGEGEHKIM +IR ++ P DPN RHCLYGLDADLI
Sbjct: 151 VNMKISSDKSWQGVTIYLSGHETPGEGEHKIMEFIRSEKGKPDHDPNIRHCLYGLDADLI 210
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
ML L +HE HFS+LRE + G++ + VC ++T H
Sbjct: 211 MLGLTSHESHFSLLREEVRFGGKKTQ-RVCAP----------------------EETTFH 247
Query: 299 KKKYQFLNIWVLREYLQYELDI--PNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEI 356
L++ ++REY+ YE F + ERI+DD++ + F VGNDF+PH+P L I
Sbjct: 248 -----LLHLSLMREYIDYEFSALKDKISFKYDIERIIDDWILMGFLVGNDFIPHLPHLHI 302
Query: 357 REGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQK--------R 408
A+ LL Y +GGY+ + G + L R EK++ ++ ++ + F +
Sbjct: 303 NHDALPLLYRTYMTVLPELGGYINENGHLNLPRFEKYLIKLSDFDREHFSEVFVDLKWFE 362
Query: 409 TRIQQAY-------------EYNE--------AMKLNARRESSEELLQAPVAVADTVKLG 447
+++ Y Y + +M L A ++ EE++ + + D
Sbjct: 363 SKVGNKYLNEAAGIAAEEAKNYKQKKLKGQENSMCLAALDKTKEEVMTSKSVIED----- 417
Query: 448 EP-----------GYKERYYADKFEISNPEEI--DKVKKDVVLKYVEGLCWVCRYYYQDV 494
EP YK YY K + EI D D YV+ + W+ YYY V
Sbjct: 418 EPEDDDLFETEFRQYKRTYYMTKMGV----EIVSDDFLADQAECYVQAIQWILHYYYHGV 473
Query: 495 CSWQWFYPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLM 554
SW W+YPYHYAP+ SD++++S+L+I F LG+PF PF+QL+ LPAAS LP Y++LM
Sbjct: 474 QSWSWYYPYHYAPYLSDIRNISELKIQFELGKPFMPFEQLLAVLPAASKDLLPGCYQHLM 533
Query: 555 TDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNS 614
T SPI ++YPPDF+ D+NGK+ W+ VV +PFIDE LL+ + +L EEE RN
Sbjct: 534 TSEESPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDETRLLQAMESCHKYLREEEEKRNR 593
Query: 615 VMLDLLYVHPQHPLYQQITLY---------CQLYHQLPPQDRFAWEIDVN 655
L+Y ++ ++ + C H++ D AW +D+N
Sbjct: 594 HSECLMYWFDGDSGFKYLSPWPERFPPIEKCHARHKIISLD--AWHVDIN 641
>gi|410924239|ref|XP_003975589.1| PREDICTED: 5'-3' exoribonuclease 1-like [Takifugu rubripes]
Length = 1673
Score = 447 bits (1149), Expect = e-122, Method: Compositional matrix adjust.
Identities = 262/701 (37%), Positives = 385/701 (54%), Gaps = 112/701 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP FYRW+++RYP + ++V+E Q+ EFDNLYLDMNGII
Sbjct: 1 MGVPKFYRWISERYPC-LSEIVKEH-QIP------------------EFDNLYLDMNGII 40
Query: 61 HPCFHPDGKPAP--TSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C HP+ + S + +F IF Y++ +F +++P K+ ++A+DGVAPRAKMNQQR R
Sbjct: 41 HQCSHPNDEDVHFRISEEKIFADIFHYVEVLFRIIKPCKVFFMAVDGVAPRAKMNQQRGR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RFR+AK+A EE+++K ++ G++L + + DSN ITPGT FMA L L+YF
Sbjct: 101 RFRSAKEA------EEKIKKALDK-GEVLPTEAR---FDSNCITPGTDFMARLQEQLEYF 150
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
+ +++ WQ +V LS PGEGEHKIM +IR + P DPNTRHCLYGLDADLI
Sbjct: 151 VHNKVSTDKLWQNVRVYLSGHETPGEGEHKIMEFIRSENIKPDHDPNTRHCLYGLDADLI 210
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
ML L +HE +FS+LRE + G++ + + T
Sbjct: 211 MLGLTSHEPNFSLLREEVRFGGKKSQKRI---------------------------TAPE 243
Query: 299 KKKYQFLNIWVLREYLQYELDIPNPPFPIN--FERIVDDFVFLCFFVGNDFLPHMPTLEI 356
+ + L++ ++REY+ YE + N FERI+DD++ + F VGNDF+PH+P L I
Sbjct: 244 ETTFHLLHLSLMREYIDYEFSVLRNHLGSNYDFERIIDDWILMGFLVGNDFIPHLPHLHI 303
Query: 357 REGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQK--------R 408
A+ LL Y ++GGYL + G + L EK+++ ++ ++ + F +
Sbjct: 304 SHDALPLLYKTYISVLPSLGGYLNENGNLNLKNFEKYMEKLSEFDREHFSEVFVDLKWFE 363
Query: 409 TRIQQAYEYNEAMKLNARRESSEELLQAPVAVADTVKL----GEPG-------------- 450
+++ Y NEA L A +E++ + V +D+ + +P
Sbjct: 364 SKVGNKY-LNEAAGLAAEKEAAIQATVMEVCTSDSTRCLTASEKPAGDDEEEDDDLFETE 422
Query: 451 ---YKERYYADKFEISNPEEIDKVKKDVVLK----YVEGLCWVCRYYYQDVCSWQWFYPY 503
YK YY K +D V D + YVEG+ W+ YYY V SW W+YPY
Sbjct: 423 FRQYKRTYYMTKM------GVDVVSDDFLAMQAKCYVEGIQWILHYYYHGVQSWSWYYPY 476
Query: 504 HYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYK 563
HYAPF SD+K++++L++TF LG+PF PF QL+ LPAAS LPE YR+LM +SPI +
Sbjct: 477 HYAPFLSDIKNVAELKLTFDLGKPFMPFQQLLAVLPAASMELLPEAYRHLMNSENSPIIE 536
Query: 564 FYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVH 623
+YP DF+ D+NGK+ W+ VV +PFIDE+ LL + LT++E RN +Y +
Sbjct: 537 YYPHDFKTDLNGKQQEWEAVVLIPFIDERCLLAAMEPWNHQLTKQERSRNCHTECAVYSY 596
Query: 624 -PQHPLYQQITL--------YCQLYHQLPPQDRFAWEIDVN 655
P+ TL C + + P D AW++ +N
Sbjct: 597 DPEADFKYSSTLPQLFPDIIRCHVKKEHIPMD--AWQVPMN 635
>gi|195133694|ref|XP_002011274.1| GI16439 [Drosophila mojavensis]
gi|193907249|gb|EDW06116.1| GI16439 [Drosophila mojavensis]
Length = 1816
Score = 447 bits (1149), Expect = e-122, Method: Compositional matrix adjust.
Identities = 252/640 (39%), Positives = 372/640 (58%), Gaps = 91/640 (14%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP F+R++++RYP + ++ E S P EFDNLYLDMNGI+
Sbjct: 1 MGVPKFFRYISERYP-CLSELAREH--------------SIP-----EFDNLYLDMNGIV 40
Query: 61 HPCFHPDGKPAPTSYDD--VFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C HPD ++ +F+ I++YID +F L++P+KL +LA+DGVAPRAKMNQQR+R
Sbjct: 41 HNCSHPDDSNIHFHLEETQIFQDIYNYIDKLFYLIKPQKLFFLAVDGVAPRAKMNQQRSR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RFR+A++A + EA + R R E K + E DSN ITPGT+FM L A L+ F
Sbjct: 101 RFRSAREAEQLEA-KARQRGE----------KREHERFDSNCITPGTEFMVRLQAGLRCF 149
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
++ +++Q P WQ +VILS PGEGEHKIM YIR + P FDPNTRHCLYGLDADLI
Sbjct: 150 LRTKISQDPLWQKCRVILSGQETPGEGEHKIMDYIRYMKAQPTFDPNTRHCLYGLDADLI 209
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
+L L THE+HF +LRE + K G N V T +
Sbjct: 210 ILGLCTHELHFVVLREEV------------------------KFGRN------VKRTSVE 239
Query: 299 KKKYQFLNIWVLREYLQYEL-DIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIR 357
+ ++ L++ +LREYL+ E ++ P ++ +++DD+V + F VGNDF+PH+P L I
Sbjct: 240 ETRFFLLHLGLLREYLELEFHELSTPEQKLDVAQLIDDWVLMGFMVGNDFIPHLPCLHIS 299
Query: 358 EGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRT-RIQQAYE 416
A+ LL Y R + +GG + + G++ LDR+++F+ +++ E Q+F++ + ++
Sbjct: 300 SNALPLLYKTYIRIYKQLGGNINEHGKLNLDRLQQFLHALSEVELQLFEEHSDDLKYMNA 359
Query: 417 YNEAMKL---NARRESSEELLQAPVAVAD-TVKLGEP-------------------GYKE 453
EA + + + +S E + A+ D ++KL E YK
Sbjct: 360 KTEAFDVDIDDIKNDSGESYNEDLAALIDESMKLYEDDDDDVDPDDEQAVLRSEFQNYKR 419
Query: 454 RYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLK 513
YY +KF+ E++ ++ Y+ + WV YYY+ V SW W+YP+HYAPF SDL
Sbjct: 420 NYYRNKFKNEMHEDL---ISELSYHYISAIQWVLDYYYRGVQSWDWYYPFHYAPFISDLN 476
Query: 514 DLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDM 573
++ + ++ F +G+PF PF QL+ LPAAS + LP Y +LM P+SP+ +FYP +F+ D+
Sbjct: 477 NIKNTKVNFKMGKPFLPFQQLLAVLPAASVNLLPMAYHDLMLKPNSPLAEFYPTEFESDL 536
Query: 574 NGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRN 613
NGK+ W+ VV +PFI+EK LL E L+ EE RN
Sbjct: 537 NGKKHDWEAVVLIPFIEEKRLLSAMADCEPQLSVEERERN 576
>gi|343427909|emb|CBQ71434.1| related to dna exoribonuclease Dhp1p [Sporisorium reilianum SRZ2]
Length = 1251
Score = 446 bits (1148), Expect = e-122, Method: Compositional matrix adjust.
Identities = 222/440 (50%), Positives = 301/440 (68%), Gaps = 7/440 (1%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQV----DGEGVARPVDVSKPNPNGMEFDNLYLDM 56
MGVPA +RWL+ +YP + V EEDP DG + P+D S PNPNG EFD LYLDM
Sbjct: 1 MGVPALFRWLSKKYPRIVSSVQEEDPATAPGPDGTEITLPLDTSTPNPNGEEFDCLYLDM 60
Query: 57 NGIIHPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQR 116
NGI+HPC HP+GKPAP + +++ +F Y + + +VRPR+LL +AIDGVAPRAKMNQQR
Sbjct: 61 NGIVHPCTHPEGKPAPETEEEMMVEVFAYTERVVNMVRPRRLLMMAIDGVAPRAKMNQQR 120
Query: 117 TRRFRAAKDAAEAEAEEERLRKEFEEAGKLLS--AKEKPETCDSNVITPGTQFMAVLSAA 174
+RRFRAAK+A E E+E E++ G ++ A + + DSN ITPGT FM +L+A+
Sbjct: 121 SRRFRAAKEAREKHEEKEAALAEWKAKGLPVTDDALQSKKAWDSNAITPGTPFMDLLAAS 180
Query: 175 LQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLD 234
L+Y++ ++N PGW+ +VI+SDA+VPGEGEHKIM +IR QR+ P DPNT+H +YGLD
Sbjct: 181 LRYWVAQKINSDPGWKDVQVIISDASVPGEGEHKIMEHIRRQRSHPEHDPNTKHVIYGLD 240
Query: 235 ADLIMLSLATHEIHFSILRE-VITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVD 293
ADLIMLSLATHE +F +LRE V + + C +CGQ GH AA C G + + +
Sbjct: 241 ADLIMLSLATHEPYFKVLREDVFAADNKPKTCNLCGQPGHFAASCTGAAKKKSGEHDEIA 300
Query: 294 DTPIHKKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPT 353
TP KK + FL++ LREYL+ EL+IP PF + ER +DD+VFL FFVGNDFLPH+P+
Sbjct: 301 PTPPEKKPFIFLDVATLREYLEVELNIPQLPFAFDLERAIDDWVFLIFFVGNDFLPHLPS 360
Query: 354 LEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQ 413
LEIR+GAI+ L+ ++++E AMGGYLT+ G V L R + + +A ED IF++R +
Sbjct: 361 LEIRDGAIDTLLRIWKKELPAMGGYLTNHGRVELGRAQIILSGLASEEDDIFRRRKEDED 420
Query: 414 AYEYNEAMKLNARRESSEEL 433
E N+ + ++ EL
Sbjct: 421 RRENNKKRREEMQKRREREL 440
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 107/226 (47%), Positives = 147/226 (65%), Gaps = 7/226 (3%)
Query: 442 DTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFY 501
DTVK+ EPGY+ERYY +KF + + ++ VV Y+EGLCWV YYYQ V SWQW+Y
Sbjct: 649 DTVKMWEPGYRERYYKEKFGVDLSDT--DFRRQVVKSYIEGLCWVLAYYYQGVPSWQWYY 706
Query: 502 PYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPI 561
P+H++PFA+D +DL L+I F LG PF+PF+QLMG LPA S +++P + LMT+ S I
Sbjct: 707 PFHFSPFAADFEDLESLDIKFELGAPFKPFEQLMGVLPADSRASIPPAFHPLMTESDSEI 766
Query: 562 YKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLY 621
FYP +F+IDMNGK+ AWQGV LPFIDEK LL + L+++E+ RN + L+
Sbjct: 767 IDFYPSEFEIDMNGKKMAWQGVALLPFIDEKRLLDALNEKYPLLSDDEVRRNGFGNNTLF 826
Query: 622 VHPQHPLYQQITLYCQLYHQLPPQDRFA-WEIDVNA--SGGMNGYI 664
V + LY L ++Y + P D I VN+ +GG+ GY+
Sbjct: 827 VGSESRLYD--FLCEEIYAKKPSTDDGTPKRIAVNSALTGGVTGYV 870
>gi|443899706|dbj|GAC77035.1| multidrug resistance-associated protein [Pseudozyma antarctica
T-34]
Length = 1165
Score = 446 bits (1148), Expect = e-122, Method: Compositional matrix adjust.
Identities = 221/441 (50%), Positives = 303/441 (68%), Gaps = 8/441 (1%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEED----PQVDGEGVARPVDVSKPNPNGMEFDNLYLDM 56
MGVPA +RWL+ +YP + V EE+ P DG + P+D S PNPNG EFD LYLDM
Sbjct: 1 MGVPALFRWLSKKYPRIVSSVQEEENKTAPGPDGTTITLPLDTSTPNPNGEEFDCLYLDM 60
Query: 57 NGIIHPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQR 116
NGI+HPC HP+GKPAP + +++ +F Y + + +VRPR+LL +AIDGVAPRAKMNQQR
Sbjct: 61 NGIVHPCTHPEGKPAPETEEEMMVEVFAYTERVVSMVRPRRLLMMAIDGVAPRAKMNQQR 120
Query: 117 TRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSA---KEKPETCDSNVITPGTQFMAVLSA 173
+RRFRAAK+A E E + E+ G ++ KE + DSN ITPGT FM +L+A
Sbjct: 121 SRRFRAAKEAREKHEETQAALAEWRAKGLAVTEDAPKESKKAWDSNAITPGTPFMDLLAA 180
Query: 174 ALQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGL 233
+L+Y++ ++N PGW+ +VI+SDA+VPGEGEHKIM +IR QR+ P DPNT+H +YGL
Sbjct: 181 SLRYWVAHKINTDPGWKDIQVIISDASVPGEGEHKIMEHIRRQRSHPEHDPNTKHVIYGL 240
Query: 234 DADLIMLSLATHEIHFSILRE-VITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGV 292
DADLIMLSLATHE +F +LRE V + + C +CGQ GH AA C G + +
Sbjct: 241 DADLIMLSLATHEPYFKVLREDVFASDNKPKTCNLCGQPGHFAASCTGAARKKSGEHDEK 300
Query: 293 DDTPIHKKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMP 352
TP KK + FL++ LREYL+ EL++PN PF + ER +DD+VFL FFVGNDFLPH+P
Sbjct: 301 AQTPPEKKPFIFLDVATLREYLEVELNMPNLPFAFDLERAIDDWVFLIFFVGNDFLPHLP 360
Query: 353 TLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQ 412
+LEIR+GAI+ L+ ++++E AMGGYLT+ G+V L R + + +A ED+IF++R +
Sbjct: 361 SLEIRDGAIDTLLKIWKKELPAMGGYLTNHGKVELARAQLILNGLASQEDEIFRRRKEEE 420
Query: 413 QAYEYNEAMKLNARRESSEEL 433
E N+ + + ++ +EL
Sbjct: 421 DRRENNKKRREDMQKRREKEL 441
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 105/226 (46%), Positives = 144/226 (63%), Gaps = 7/226 (3%)
Query: 442 DTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFY 501
DTVK+ EPGY+ERYY +KF + + ++ VV Y+EGL WV YYYQ V SWQW+Y
Sbjct: 654 DTVKMWEPGYRERYYREKFGVDLSDT--DFRRQVVKSYIEGLSWVLAYYYQGVPSWQWYY 711
Query: 502 PYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPI 561
P+H++PFA+D +DL L+I F LG PF+PF+QLMG LPA S +++P + LMT+ S I
Sbjct: 712 PFHFSPFAADFEDLESLDIKFELGAPFKPFEQLMGVLPADSRASIPPAFHPLMTESDSDI 771
Query: 562 YKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLY 621
FYP +F+IDMNGK+ AWQGV LPFIDEK LL LT++E+ RN + L+
Sbjct: 772 IDFYPSEFEIDMNGKKMAWQGVALLPFIDEKRLLDALSDKYPLLTDDEVRRNGFGNNTLF 831
Query: 622 VHPQHPLYQQITLYCQLYHQLPPQDRFAWE---IDVNASGGMNGYI 664
V + LY+ L Q+Y + D +E ++ SGG+ G +
Sbjct: 832 VGDESRLYE--FLCEQIYAKKRDGDDKPFEPVPMNPALSGGITGSV 875
>gi|391869656|gb|EIT78851.1| 5'-3' exonuclease [Aspergillus oryzae 3.042]
Length = 1035
Score = 446 bits (1148), Expect = e-122, Method: Compositional matrix adjust.
Identities = 217/427 (50%), Positives = 295/427 (69%), Gaps = 8/427 (1%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDP-QVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGI 59
MGVPA +RWL+++YP I V+EE P +V+GE + PVD ++PNPNG E DNLYLDMNGI
Sbjct: 1 MGVPALFRWLSNKYPKIISPVIEEQPYEVNGEQI--PVDTTRPNPNGEELDNLYLDMNGI 58
Query: 60 IHPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRR 119
+HPC HP+GKP P + ++ IF+Y D + +VRPRKLL +A+DGVAPRAKMNQQR RR
Sbjct: 59 VHPCTHPEGKPPPANEQEMMLEIFNYTDRVVNMVRPRKLLMIAVDGVAPRAKMNQQRARR 118
Query: 120 FRAAKDAAEAEAEEERLRKEFEEAGK---LLSAKEKPETCDSNVITPGTQFMAVLSAALQ 176
FR+A++A EA+ ++E RK+F + K + + +T DSNVITPGT FM +L+A+L+
Sbjct: 119 FRSAQEAKEADEKKEEFRKQFLKKSKGDQEIHEEVIQKTWDSNVITPGTPFMDILAASLR 178
Query: 177 YFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDAD 236
Y+I +LN P W+ K+I+SDA VPGEGEHKIM ++R QR P DPNTRH +YGLDAD
Sbjct: 179 YWIAYKLNTDPAWEKLKIIISDATVPGEGEHKIMEFVRSQRAAPEHDPNTRHVIYGLDAD 238
Query: 237 LIMLSLATHEIHFSILRE-VITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDT 295
LIML LATHE HF +LRE V + C +CGQ GH A EC G+ + ++
Sbjct: 239 LIMLGLATHEPHFRVLREDVFFQESKARTCHLCGQAGHKAEECRGQAKEKNGQFD-EKGK 297
Query: 296 PIHKKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLE 355
K + +LN+ +LREYL EL +P+ PFP + ER +DD+VF+CFFVGNDFLPH+P+L+
Sbjct: 298 GTSLKPFIWLNVSILREYLAVELYVPHQPFPFDLERALDDWVFMCFFVGNDFLPHLPSLD 357
Query: 356 IREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAY 415
IRE I+ L+ ++R MGGYLT G V + + +Q +A ED IF++R ++++
Sbjct: 358 IRENGIDTLIAIWRDNIPVMGGYLTKDGHVEFKKAQLILQGLAKQEDAIFRRRRQVEEKK 417
Query: 416 EYNEAMK 422
NE +
Sbjct: 418 LANEKRR 424
Score = 213 bits (542), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 109/253 (43%), Positives = 160/253 (63%), Gaps = 8/253 (3%)
Query: 442 DTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFY 501
DTV+L E GY +RYY KF + +P++ + + V Y EGL WV YY+Q SW W+Y
Sbjct: 583 DTVRLWEEGYADRYYEQKFGV-DPQD-KEFRHKVARAYAEGLAWVLLYYFQGCPSWNWYY 640
Query: 502 PYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPI 561
PYHYAPFA+D D+ D+E++F G PF+PF+QLMG LPA+S+ A+PE + +LM DP S I
Sbjct: 641 PYHYAPFAADFVDIGDMELSFEKGTPFKPFEQLMGVLPASSNHAIPEVFHDLMQDPESEI 700
Query: 562 YKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLY 621
FYP DF +D+NGK+FAWQGV+ LPFIDEK LL +K L+++E RN+V ++L
Sbjct: 701 IDFYPEDFAVDLNGKKFAWQGVILLPFIDEKRLLAAMEKKYPLLSDDERHRNTVGREVLL 760
Query: 622 VHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVNASGGMNGYIWLCERNGLRSIIPSPVK 681
+ HPLYQ + Q P+ + +++ S G+ G + E S + S ++
Sbjct: 761 LSDGHPLYQDLVANFYSKKQGAPK----YTLNMRVSEGLAGRVERNETYIPHSSLVSSLE 816
Query: 682 --GLPDIERNQAM 692
G+P +E ++++
Sbjct: 817 EYGMPTLEDDRSL 829
>gi|239607237|gb|EEQ84224.1| 5'-3' exoribonuclease 2 [Ajellomyces dermatitidis ER-3]
gi|327351196|gb|EGE80053.1| 5'-3' exoribonuclease 2 [Ajellomyces dermatitidis ATCC 18188]
Length = 1031
Score = 446 bits (1148), Expect = e-122, Method: Compositional matrix adjust.
Identities = 227/427 (53%), Positives = 297/427 (69%), Gaps = 14/427 (3%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQ-VDGEGVARPVDVSKPNPNGMEFDNLYLDMNGI 59
MGVPA +RWL+ +YP I VVEE PQ +DGE V PVD +KPNPNG E DNLYLDMNGI
Sbjct: 1 MGVPALFRWLSSKYPKIISPVVEEIPQEIDGEEV--PVDTTKPNPNGEEMDNLYLDMNGI 58
Query: 60 IHPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRR 119
+HPC HP+GKP P + +D+ IF Y D + +VRPRKLL +A+DGVAPRAKMNQQR+RR
Sbjct: 59 VHPCTHPEGKPPPETEEDMMLEIFKYTDRVVNMVRPRKLLMIAVDGVAPRAKMNQQRSRR 118
Query: 120 FRAAKDAAEAEAEEER----LRKE-FEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAA 174
FR+A++A EA+ ++E LRK+ + G+ L + +T DSNVITPGT FM +L+AA
Sbjct: 119 FRSAQEAKEADEKKEEFAKLLRKQNGNKGGEGLVEEVITKTWDSNVITPGTPFMDILAAA 178
Query: 175 LQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLD 234
L+Y++ +LN P W+ K+I+SDA VPGEGEHKIM +IR QR+ DPNTRH +YGLD
Sbjct: 179 LRYWVAYKLNTDPAWEKLKIIISDATVPGEGEHKIMEFIRSQRSCTEHDPNTRHVIYGLD 238
Query: 235 ADLIMLSLATHEIHFSILRE-VITLPGQQEKCFVCGQVGHLAAECHG--KPGDNPADWNG 291
ADLIML LATHE HF +LRE V + C +CGQ GH+A C G K + D G
Sbjct: 239 ADLIMLGLATHEPHFRVLREDVFFQESKGRTCHLCGQPGHIAEACKGLAKEKNGEFDEKG 298
Query: 292 VDDTPIHKKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHM 351
+P+ K + +L++ VLREYL E+ +P PFP + ER +DD+VF+CFFVGNDFLPH+
Sbjct: 299 -KGSPL--KPFIWLHVSVLREYLAVEMHVPQQPFPFDLERALDDWVFMCFFVGNDFLPHL 355
Query: 352 PTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRI 411
P+L+IRE I+ L+ ++R MGGYLT G V LDR + +Q +A ED IF++R +
Sbjct: 356 PSLDIRENGIDTLIAIWRDNIPVMGGYLTKDGHVDLDRAQLILQGLAKQEDAIFRRRRQT 415
Query: 412 QQAYEYN 418
++ N
Sbjct: 416 EERKNAN 422
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 108/229 (47%), Positives = 146/229 (63%), Gaps = 9/229 (3%)
Query: 442 DTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFY 501
DTV+L E GY +RYY KF + +P++ + + V YVEGL WV YY+Q SW W+Y
Sbjct: 561 DTVRLWEDGYADRYYEQKFRV-DPKDTE-FRHKVARAYVEGLAWVLLYYFQGCPSWTWYY 618
Query: 502 PYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPI 561
PYHYAPFA+D DL + I F G PF+PF+QLMG LPAAS+ A+PE + +LM+DP S I
Sbjct: 619 PYHYAPFAADFVDLGKMNIEFSRGAPFKPFEQLMGVLPAASNHAIPEVFHDLMSDPESEI 678
Query: 562 YKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLY 621
FYP +F ID+NGK+FAWQGV LPFIDEK LL +K L+ EE RN++ ++L+
Sbjct: 679 IDFYPEEFPIDLNGKKFAWQGVALLPFIDEKRLLLAMEKRYPLLSSEEHARNTMGREVLF 738
Query: 622 VHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVNASGGMNGYIWLCERN 670
+ +HPLY +T Q P ++++ S G+ G + ERN
Sbjct: 739 LSDRHPLYDNLTANFYSKKQGTP----ILKLNMRVSEGLGGKV---ERN 780
>gi|332858058|ref|XP_001145394.2| PREDICTED: 5'-3' exoribonuclease 2 isoform 4 [Pan troglodytes]
gi|397478695|ref|XP_003810675.1| PREDICTED: 5'-3' exoribonuclease 2 isoform 2 [Pan paniscus]
Length = 874
Score = 446 bits (1148), Expect = e-122, Method: Compositional matrix adjust.
Identities = 274/683 (40%), Positives = 373/683 (54%), Gaps = 82/683 (12%)
Query: 81 SIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRFRAAKDAAEAEAEEERLRKEF 140
+IF+YID +F +VRPR+LLY+AIDGVAPRAKMNQQR+RRFRA+K+ EA E++R+R+E
Sbjct: 4 AIFEYIDRLFSIVRPRRLLYMAIDGVAPRAKMNQQRSRRFRASKEGMEAAVEKQRVREEI 63
Query: 141 EEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQARLNQIPGWQFTKVILSDAN 200
G L +E E DSN ITPGT+FM L+ L+Y+I RLN PGW+ VILSDA+
Sbjct: 64 LAKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIADRLNNDPGWKNLTVILSDAS 123
Query: 201 VPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIMLSLATHEIHFSILREVITLPG 260
PGEGEHKIM YIR QR P DPNT HCL G DADLIML LATHE +F+I+RE P
Sbjct: 124 APGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLGLATHEPNFTIIREEFK-PN 182
Query: 261 QQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDT-PIHKKKYQFLNIWVLREYLQYELD 319
+ + C +C Q GH +C G P + + + D+ P + ++ FL + VLREYL+ EL
Sbjct: 183 KPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEGEFIFLRLNVLREYLERELT 242
Query: 320 IPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHVYRREFTAMGGYL 379
+ + PF + ER +DD+VF+CFFVGNDFLPH+P+LEIRE AI+ L+++Y+ GGYL
Sbjct: 243 MASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIRENAIDRLVNIYKNVVHKTGGYL 302
Query: 380 TDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYEYNEAM------------------ 421
T++G V L RV+ + +V ED IF+KR + ++ +
Sbjct: 303 TESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSFRRRQKEKRKRMKRDQPAFTPSGIL 362
Query: 422 ---KLNARRESSEELLQAPVAVADTVKLGEPGYKERYYADKFEI-SNPEEIDKVKK---- 473
L +R ++ P A +++ F +P + +K+
Sbjct: 363 TPHALGSRNSPGSQVASNPRQAAYEMRMQNNSSPSISPNTSFTSDGSPSPLGGIKRKAED 422
Query: 474 --------DVVLKYVEGLCWVCRYY--------------------YQDVCSWQWFYPYH- 504
D V + G W RYY Y + W Y Y
Sbjct: 423 SDSEPEPEDNVRLWEAG--WKQRYYKNKFDVDAADEKFRRKVVQSYVEGLCWVLRYYYQG 480
Query: 505 ------YAPF-----ASDLKDLSDLEITFFLG-EPFRPFDQLMGTLPAASSSALPEKYRN 552
Y PF ASD + ++D+ F G +PF+P +QLMG PAAS + LP +R
Sbjct: 481 CASWKWYYPFHYAPFASDFEGIADMPSDFEKGTKPFKPLEQLMGVFPAASGNFLPPSWRK 540
Query: 553 LMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFR 612
LM+DP S I FYP DF ID+NGK++AWQGV LPF+DE+ L +++ LT EE R
Sbjct: 541 LMSDPDSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEETRR 600
Query: 613 NSVMLDLLYVHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDV--NASGGMNGYIWLCERN 670
NS+ D+L+V HPL+ I Q P +DV G+ G L E
Sbjct: 601 NSLGGDVLFVGKHHPLHDFILELYQTGSTEP--------VDVPPELCHGIQGKFSLDEEA 652
Query: 671 GL-RSIIPSPVKGLPDIERNQAM 692
L I+ SPV L D+ +N +
Sbjct: 653 ILPDQIVCSPVPMLRDLTQNTVV 675
>gi|345479163|ref|XP_003423891.1| PREDICTED: 5'-3' exoribonuclease 1-like isoform 2 [Nasonia
vitripennis]
Length = 1682
Score = 446 bits (1148), Expect = e-122, Method: Compositional matrix adjust.
Identities = 254/650 (39%), Positives = 357/650 (54%), Gaps = 97/650 (14%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP F+R++++RYP + E Q+ EFDNLYLDMNGII
Sbjct: 1 MGVPKFFRYISERYPCLSEKLKEY--QIP------------------EFDNLYLDMNGII 40
Query: 61 HPCFHPDGKPAP--TSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C HP+ A + + +FK+IF YI+ +F +++P+KL ++A+DGVAPRAK+NQQR R
Sbjct: 41 HNCSHPNDADATFRITEETIFKNIFHYIEILFRIIQPQKLFFMAVDGVAPRAKINQQRGR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RFRAAK+A EA+ +E + + DSN ITPGT FM+ L+ L+YF
Sbjct: 101 RFRAAKEAEVLEAKARAKGQEIPKEARF----------DSNCITPGTVFMSKLNEQLKYF 150
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
I +++ WQ K+ILS + VPGEGEHKIM YIR + P ++ NTRHCLYGLDADLI
Sbjct: 151 ITYKISTDKLWQKCKIILSGSEVPGEGEHKIMDYIRYMKAQPDYEGNTRHCLYGLDADLI 210
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
ML L +HE HFS+LRE + Q+K P + N
Sbjct: 211 MLGLCSHEPHFSLLREEVKFGKTQKKILT------------------PEETN-------- 244
Query: 299 KKKYQFLNIWVLREYLQYELD--IPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEI 356
+ L++ ++REYL++E F + E+I+DD+V + F VGNDF+PH+P L I
Sbjct: 245 ---FCLLHLSLMREYLEHEFSPVKDKLTFKFDIEKIIDDWVLMGFLVGNDFIPHLPNLHI 301
Query: 357 REGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYE 416
GA+ LL + Y + GY+ +AG + L+R EKF++ + Y+ + F + + +E
Sbjct: 302 ENGALPLLYNAYMDVLPTLDGYINEAGTLNLERFEKFMEKLGKYDLEQFDEIYADLKFFE 361
Query: 417 YNEAMKLN-ARRES-------------------------------SEELLQAPVAVADTV 444
+LN + R S S+E L+ +
Sbjct: 362 AKTGRRLNESERNSKNSPDENASPKKTNKALNALIMATENELGADSDEDLEGESDSDTEM 421
Query: 445 KLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYH 504
+L +K YY +K E +N + + + Y+ + W YYY CSW W+YP+H
Sbjct: 422 QLEFVQHKRDYYMNKMEYANVDA--ETMRSQAEGYIRAIQWNLHYYYNGCCSWSWYYPHH 479
Query: 505 YAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKF 564
YAPF SD+K+ DL++ F LGEPF+PF+QL+ LPAAS S LP Y LMT+ SPI K+
Sbjct: 480 YAPFISDIKNFKDLKLEFDLGEPFKPFEQLLAVLPAASKSLLPTAYHGLMTEEKSPIIKY 539
Query: 565 YPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNS 614
YP DF+ D+NGK+ W+ VV +P IDEK LL+ K LT EE RNS
Sbjct: 540 YPLDFKTDLNGKKQEWEAVVLIPLIDEKSLLKAMKPCNAKLTPEERKRNS 589
>gi|432915339|ref|XP_004079186.1| PREDICTED: LOW QUALITY PROTEIN: 5'-3' exoribonuclease 1-like
[Oryzias latipes]
Length = 1689
Score = 446 bits (1147), Expect = e-122, Method: Compositional matrix adjust.
Identities = 256/657 (38%), Positives = 366/657 (55%), Gaps = 108/657 (16%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP FYRW+++RYP + +VV+E Q+ EFDNLYLDMNGII
Sbjct: 1 MGVPKFYRWISERYPC-LSEVVKEH-QIP------------------EFDNLYLDMNGII 40
Query: 61 HPCFHPDGKPAP--TSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C HP+ + S + +F IF Y++ +F +++PRK+ ++A+DGVAPRAKMNQQR R
Sbjct: 41 HQCSHPNDEDVHFRISEEKIFADIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RFR+AK+A E++++K ++ G++L + + DSN ITPGT FMA L L+YF
Sbjct: 101 RFRSAKEA------EDKIKKALDK-GEVLPTEAR---FDSNCITPGTDFMARLQEQLKYF 150
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
+ +L+ W KV LS PGEGEHKIM +IR + + P DPNTRHCLYGLDADLI
Sbjct: 151 VHNKLSTDKLWHNVKVYLSGHETPGEGEHKIMEFIRSENSKPSHDPNTRHCLYGLDADLI 210
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
ML L +HE HFS+LRE + G++ + + T
Sbjct: 211 MLGLTSHEPHFSLLREEVRXGGKKSQKRI---------------------------TAPE 243
Query: 299 KKKYQFLNIWVLREYLQYELDIPNPPF--PINFERIVDDFVFLCFFVGNDFLPHMPTLEI 356
+ + L++ ++REY+ YE + ERI+DD++ + F VGNDF+PH+P L I
Sbjct: 244 ETTFHLLHLSLMREYIDYEFSWLKNHLGSAYDLERIIDDWILMGFLVGNDFIPHLPNLHI 303
Query: 357 REGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQK--------R 408
A+ +L Y ++GGYL + G + L EK+++ ++ ++ + F +
Sbjct: 304 NHDALPMLYKTYISVLPSLGGYLNENGHLNLKNFEKYMEKLSEFDREHFNEVFVDLKWFE 363
Query: 409 TRIQQAYEYNEAMKLNARRESS-EELLQAPVAVADTVKLGEPG----------------- 450
+++ Y NE+ L A +ES+ ++ + A L P
Sbjct: 364 SKVGNKY-LNESAGLAAEKESAGKKFNKKKDASLGLSALTSPDKDTEHKEVAEDDDEEEE 422
Query: 451 ----------YKERYYADKFEISNPEEIDKVKKDVVLK----YVEGLCWVCRYYYQDVCS 496
YK YY K +D V + + + YVEG+ W+ YYY V S
Sbjct: 423 DDLFETEFRQYKRTYYMTKM------AVDVVSDEFLAQQAKCYVEGIQWILHYYYHGVQS 476
Query: 497 WQWFYPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTD 556
W W+YPYHYAPF SD++++SDL++TF LGEPF PF QL+ LPAAS LPE YR+LMT
Sbjct: 477 WSWYYPYHYAPFLSDIRNISDLKLTFELGEPFMPFQQLLAVLPAASMGLLPECYRHLMTS 536
Query: 557 PSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRN 613
+SPI ++YP DF+ D+NGK+ W+ VV +PFIDEK LL + LT+EE RN
Sbjct: 537 ENSPIIEYYPVDFKTDLNGKQQEWEAVVLIPFIDEKRLLAAMEPYNHKLTKEEKDRN 593
>gi|156537119|ref|XP_001603129.1| PREDICTED: 5'-3' exoribonuclease 1-like isoform 1 [Nasonia
vitripennis]
Length = 1739
Score = 446 bits (1147), Expect = e-122, Method: Compositional matrix adjust.
Identities = 254/650 (39%), Positives = 357/650 (54%), Gaps = 97/650 (14%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP F+R++++RYP + E Q+ EFDNLYLDMNGII
Sbjct: 1 MGVPKFFRYISERYPCLSEKLKEY--QIP------------------EFDNLYLDMNGII 40
Query: 61 HPCFHPDGKPAP--TSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C HP+ A + + +FK+IF YI+ +F +++P+KL ++A+DGVAPRAK+NQQR R
Sbjct: 41 HNCSHPNDADATFRITEETIFKNIFHYIEILFRIIQPQKLFFMAVDGVAPRAKINQQRGR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RFRAAK+A EA+ +E + + DSN ITPGT FM+ L+ L+YF
Sbjct: 101 RFRAAKEAEVLEAKARAKGQEIPKEARF----------DSNCITPGTVFMSKLNEQLKYF 150
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
I +++ WQ K+ILS + VPGEGEHKIM YIR + P ++ NTRHCLYGLDADLI
Sbjct: 151 ITYKISTDKLWQKCKIILSGSEVPGEGEHKIMDYIRYMKAQPDYEGNTRHCLYGLDADLI 210
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
ML L +HE HFS+LRE + Q+K P + N
Sbjct: 211 MLGLCSHEPHFSLLREEVKFGKTQKKILT------------------PEETN-------- 244
Query: 299 KKKYQFLNIWVLREYLQYELD--IPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEI 356
+ L++ ++REYL++E F + E+I+DD+V + F VGNDF+PH+P L I
Sbjct: 245 ---FCLLHLSLMREYLEHEFSPVKDKLTFKFDIEKIIDDWVLMGFLVGNDFIPHLPNLHI 301
Query: 357 REGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYE 416
GA+ LL + Y + GY+ +AG + L+R EKF++ + Y+ + F + + +E
Sbjct: 302 ENGALPLLYNAYMDVLPTLDGYINEAGTLNLERFEKFMEKLGKYDLEQFDEIYADLKFFE 361
Query: 417 YNEAMKLN-ARRES-------------------------------SEELLQAPVAVADTV 444
+LN + R S S+E L+ +
Sbjct: 362 AKTGRRLNESERNSKNSPDENASPKKTNKALNALIMATENELGADSDEDLEGESDSDTEM 421
Query: 445 KLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYH 504
+L +K YY +K E +N + + + Y+ + W YYY CSW W+YP+H
Sbjct: 422 QLEFVQHKRDYYMNKMEYANVDA--ETMRSQAEGYIRAIQWNLHYYYNGCCSWSWYYPHH 479
Query: 505 YAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKF 564
YAPF SD+K+ DL++ F LGEPF+PF+QL+ LPAAS S LP Y LMT+ SPI K+
Sbjct: 480 YAPFISDIKNFKDLKLEFDLGEPFKPFEQLLAVLPAASKSLLPTAYHGLMTEEKSPIIKY 539
Query: 565 YPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNS 614
YP DF+ D+NGK+ W+ VV +P IDEK LL+ K LT EE RNS
Sbjct: 540 YPLDFKTDLNGKKQEWEAVVLIPLIDEKSLLKAMKPCNAKLTPEERKRNS 589
>gi|261200841|ref|XP_002626821.1| 5'-3' exoribonuclease 2 [Ajellomyces dermatitidis SLH14081]
gi|239593893|gb|EEQ76474.1| 5'-3' exoribonuclease 2 [Ajellomyces dermatitidis SLH14081]
Length = 1031
Score = 446 bits (1147), Expect = e-122, Method: Compositional matrix adjust.
Identities = 227/427 (53%), Positives = 297/427 (69%), Gaps = 14/427 (3%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQ-VDGEGVARPVDVSKPNPNGMEFDNLYLDMNGI 59
MGVPA +RWL+ +YP I VVEE PQ +DGE V PVD +KPNPNG E DNLYLDMNGI
Sbjct: 1 MGVPALFRWLSSKYPKIISPVVEEIPQEIDGEEV--PVDTTKPNPNGEEMDNLYLDMNGI 58
Query: 60 IHPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRR 119
+HPC HP+GKP P + +D+ IF Y D + +VRPRKLL +A+DGVAPRAKMNQQR+RR
Sbjct: 59 VHPCTHPEGKPPPETEEDMMLEIFKYTDRVVNMVRPRKLLMIAVDGVAPRAKMNQQRSRR 118
Query: 120 FRAAKDAAEAEAEEER----LRKE-FEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAA 174
FR+A++A EA+ ++E LRK+ + G+ L + +T DSNVITPGT FM +L+AA
Sbjct: 119 FRSAQEAKEADEKKEEFAKLLRKQNGNKGGEGLVEEVITKTWDSNVITPGTPFMDILAAA 178
Query: 175 LQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLD 234
L+Y++ +LN P W+ K+I+SDA VPGEGEHKIM +IR QR+ DPNTRH +YGLD
Sbjct: 179 LRYWVAYKLNTDPAWEKLKIIISDATVPGEGEHKIMEFIRSQRSCTEHDPNTRHVIYGLD 238
Query: 235 ADLIMLSLATHEIHFSILRE-VITLPGQQEKCFVCGQVGHLAAECHG--KPGDNPADWNG 291
ADLIML LATHE HF +LRE V + C +CGQ GH+A C G K + D G
Sbjct: 239 ADLIMLGLATHEPHFRVLREDVFFQESKGRTCHLCGQPGHIAEACKGLAKEKNGEFDEKG 298
Query: 292 VDDTPIHKKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHM 351
+P+ K + +L++ VLREYL E+ +P PFP + ER +DD+VF+CFFVGNDFLPH+
Sbjct: 299 -KGSPL--KPFIWLHVSVLREYLAVEMHVPQQPFPFDLERALDDWVFMCFFVGNDFLPHL 355
Query: 352 PTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRI 411
P+L+IRE I+ L+ ++R MGGYLT G V LDR + +Q +A ED IF++R +
Sbjct: 356 PSLDIRENGIDTLIAIWRDNIPVMGGYLTKDGHVDLDRAQLILQGLAKQEDAIFRRRRQT 415
Query: 412 QQAYEYN 418
++ N
Sbjct: 416 EERKNAN 422
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 108/229 (47%), Positives = 146/229 (63%), Gaps = 9/229 (3%)
Query: 442 DTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFY 501
DTV+L E GY +RYY KF + +P++ + + V YVEGL WV YY+Q SW W+Y
Sbjct: 561 DTVRLWEDGYADRYYEQKFRV-DPKDTE-FRHKVARSYVEGLAWVLLYYFQGCPSWTWYY 618
Query: 502 PYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPI 561
PYHYAPFA+D DL + I F G PF+PF+QLMG LPAAS+ A+PE + +LM+DP S I
Sbjct: 619 PYHYAPFAADFVDLGKMNIEFSRGAPFKPFEQLMGVLPAASNHAIPEVFHDLMSDPESEI 678
Query: 562 YKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLY 621
FYP +F ID+NGK+FAWQGV LPFIDEK LL +K L+ EE RN++ ++L+
Sbjct: 679 IDFYPEEFPIDLNGKKFAWQGVALLPFIDEKRLLLAMEKRYPLLSSEEHARNTMGREVLF 738
Query: 622 VHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVNASGGMNGYIWLCERN 670
+ +HPLY +T Q P ++++ S G+ G + ERN
Sbjct: 739 LSDRHPLYDNLTANFYSKKQGTP----ILKLNMRVSEGLGGKV---ERN 780
>gi|198417497|ref|XP_002120271.1| PREDICTED: similar to 5-3 exoribonuclease 1 [Ciona intestinalis]
Length = 665
Score = 446 bits (1147), Expect = e-122, Method: Compositional matrix adjust.
Identities = 249/618 (40%), Positives = 354/618 (57%), Gaps = 92/618 (14%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP FYRW+++RYP + +VV+E QV EFDNLYLDMNGII
Sbjct: 1 MGVPKFYRWISERYP-CLSEVVKE-YQVP------------------EFDNLYLDMNGII 40
Query: 61 HPCFHP--DGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C HP D + + +FK IF+YI+ +F ++RP++ ++A+DGVAPRAKMNQQR R
Sbjct: 41 HNCSHPNDDDPHFRITEEQIFKDIFNYIEVLFRIIRPQRTFFMAVDGVAPRAKMNQQRGR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RFR+AK+A E K+ + G++L +++ DSN ITPGT FM L A L+YF
Sbjct: 101 RFRSAKEA-------ENNIKQALQKGEVLPTEKR---FDSNCITPGTSFMEKLQAQLEYF 150
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
+Q ++ P WQ KV LS PGEGEHKIM +IR +R+ P +DPNTRHCLYGLDADL+
Sbjct: 151 VQNKITTDPSWQGIKVYLSGHQTPGEGEHKIMEFIRYERSQPEYDPNTRHCLYGLDADLL 210
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
ML L THE HF++LRE + Q+ N A
Sbjct: 211 MLGLCTHEPHFALLREEVKFTRQK-----------------SSKTQNAA----------- 242
Query: 299 KKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIRE 358
+ + L+I +LREY+++E + PN PF N E I+DD+V + F VGNDF+PH+P L I
Sbjct: 243 QTTFHLLHISLLREYIEHEFEAPNLPFEFNIESIIDDWVLMGFLVGNDFIPHLPDLHIST 302
Query: 359 GAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYEYN 418
A+ L Y + +GGYL + G + L R+E ++++++ ++ F++ + Y++
Sbjct: 303 SALPFLYQTYIQVLPTLGGYLNEGGVINLGRLEVYLKAISSFDMDHFEE---VYSDYKWL 359
Query: 419 EAMKLNAR--------RESSEE----------LLQAPVAVADTVKLGEPGY-------KE 453
EA + + E +E+ + Q + +TV + K
Sbjct: 360 EAKSKSKKPTDCLLVGGEVTEDKSLKIVKDLAIKQGTIEATETVDEEHSTFDQEFKLHKR 419
Query: 454 RYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLK 513
YY KF I E D++ + +Y+ G+ W+C YYY V SW WFYPYHY+P+ SDL
Sbjct: 420 AYYQTKFNIEGTE--DEIST-IAYEYILGIQWICHYYYNGVQSWDWFYPYHYSPYMSDLC 476
Query: 514 DLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDM 573
++S L +T+ + +PF PF QL+ LPAAS +PE Y NLM D SS I FYP +F D+
Sbjct: 477 NISTLHLTYNMNQPFLPFQQLLAVLPAASKDCIPEPYWNLM-DESSIIGDFYPSNFSTDL 535
Query: 574 NGKRFAWQGVVKLPFIDE 591
NGK+ W+ VV++PFI+E
Sbjct: 536 NGKQQEWEAVVQIPFIEE 553
>gi|224060082|ref|XP_002195477.1| PREDICTED: 5'-3' exoribonuclease 1 [Taeniopygia guttata]
Length = 1699
Score = 446 bits (1147), Expect = e-122, Method: Compositional matrix adjust.
Identities = 264/725 (36%), Positives = 393/725 (54%), Gaps = 110/725 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP FYRW+++RYP ++ V++E Q+ EFDNLYLDMNGII
Sbjct: 1 MGVPKFYRWISERYPC-LIQVLKEH-QIP------------------EFDNLYLDMNGII 40
Query: 61 HPCFHPDGKPAP--TSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C HP+ S D +F +IF Y++ +F +++PRK+ ++A+DGVAPRAKMNQQR R
Sbjct: 41 HQCSHPNDDDVHFRISEDKIFANIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RFR+AK+A E++++K E+ G+ L + + DSN ITPGT+FMA L+ L+YF
Sbjct: 101 RFRSAKEA------EDKIKKALEK-GETLPTEAR---FDSNCITPGTEFMARLNEHLKYF 150
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
+ +++ WQ V LS PGEGEHKIM +IR ++ P DPNTRHCLYGLDADLI
Sbjct: 151 VNMKISTDKSWQGITVYLSGHETPGEGEHKIMEFIRSEKAKPHHDPNTRHCLYGLDADLI 210
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
ML L +HE HF++LRE + G++ + VC ++T H
Sbjct: 211 MLGLTSHEAHFALLREEVRFGGKKAQ-RVCAP----------------------EETTFH 247
Query: 299 KKKYQFLNIWVLREYLQYELD--IPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEI 356
L++ ++REY+ YE F + ERI+DD++ + F VGNDF+PH+P L I
Sbjct: 248 -----LLHLSLMREYIDYEFSPVKDKISFEYDIERIIDDWILMGFLVGNDFIPHLPHLHI 302
Query: 357 REGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQK--------R 408
A+ LL Y +GGY+ + G + L+R EK++ ++ ++ + F +
Sbjct: 303 NHDALPLLYRTYMAILPELGGYINENGHLNLERFEKYLAKLSDFDREHFSEVFVDLKWFE 362
Query: 409 TRIQQAY------EYNEAMKLNARRESSEELLQAPVAVADTVKLG-----------EP-- 449
+++ Y E + N +++ + +++A K G EP
Sbjct: 363 SKVGNKYLNEAAGIAAEEARKNKQKKQKVSAQENSISLAALEKNGGEVTPKTTLEDEPED 422
Query: 450 ---------GYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWF 500
YK YY K + D D YV+ + W+ YYY V SW W+
Sbjct: 423 DDLFETEFRQYKRTYYMTKMGVEVVS--DAFLADQAECYVQAIQWILHYYYHGVQSWSWY 480
Query: 501 YPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSP 560
YPYHYAP+ SD+ ++S+L+I F LG+PF PF+QL+ LPAAS LP+ Y++LMT SP
Sbjct: 481 YPYHYAPYLSDIHNISELKIKFELGKPFMPFEQLLAVLPAASKDLLPKCYQHLMTSQDSP 540
Query: 561 IYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLL 620
I ++YPPDF+ D+NGK+ W+ VV +PFIDEK LL+ + L EEE RN+ L+
Sbjct: 541 IIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLQAMESCNKGLKEEEKRRNTHSACLM 600
Query: 621 YVHPQHPLYQQITLY---------CQLYHQLPPQDRFAWEIDVNASGGMN-GYIWLCERN 670
Y + + +Q ++ + C ++ P + + EI N +N ++ C
Sbjct: 601 YWYDKDAEFQYLSPWPEKFPAIERCHTRYKTIPLNAWHVEITHNKITKINKSALYFCGFP 660
Query: 671 GLRSI 675
L+ I
Sbjct: 661 TLKHI 665
>gi|403304036|ref|XP_003942619.1| PREDICTED: 5'-3' exoribonuclease 1 isoform 2 [Saimiri boliviensis
boliviensis]
Length = 1694
Score = 446 bits (1147), Expect = e-122, Method: Compositional matrix adjust.
Identities = 254/653 (38%), Positives = 362/653 (55%), Gaps = 100/653 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP FYRW+++RYP + +VV+E Q+ EFDNLYLDMNGII
Sbjct: 1 MGVPKFYRWISERYPC-LSEVVKEH-QIP------------------EFDNLYLDMNGII 40
Query: 61 HPCFHPDGKPAP--TSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C HP+ S D +F IF Y++ +F +++PRK+ ++A+DGVAPRAKMNQQR R
Sbjct: 41 HQCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RFR+AK+A E++++K E+ G+ L + + DSN ITPGT+FMA L L+YF
Sbjct: 101 RFRSAKEA------EDKIKKAIEK-GETLPTEAR---FDSNCITPGTEFMARLHEHLKYF 150
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
+ +++ WQ + S PGEGEHKIM +IR ++ P DPNTRHCLYGLDADLI
Sbjct: 151 VNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLI 210
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
ML L +HE HFS+LRE + G++ + VC ++T H
Sbjct: 211 MLGLTSHEAHFSLLREEVRFGGKKTQ-RVCAP----------------------EETTFH 247
Query: 299 KKKYQFLNIWVLREYLQYELDI--PNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEI 356
L++ ++REY+ YE + PF + ERI+DD++ + F VGNDF+PH+P L I
Sbjct: 248 -----LLHLSLMREYIDYEFSVLKEKIPFKYDIERIIDDWILMGFLVGNDFIPHLPHLHI 302
Query: 357 REGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQK--------R 408
A+ LL Y +GGY+ ++G + L R EK++ ++ ++ + F +
Sbjct: 303 NHDALPLLYGTYITILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSEVFVDLKWFE 362
Query: 409 TRIQQAY-------------EYNEAMKLNARRES---------SEELLQAPVAVADTVKL 446
+++ Y Y E KL + S E++ + V D +
Sbjct: 363 SKVGNKYLNEAAGVAAEEARNYKEKKKLKGQENSLCWAALDKNEGEMVTSKDNVEDETED 422
Query: 447 GE------PGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWF 500
+ YK YY K + D D YV+ + W+ YYY V SW W+
Sbjct: 423 DDLFETEFRQYKRTYYMTKMGVDVVS--DDFLADQAACYVQAIQWILHYYYHGVQSWSWY 480
Query: 501 YPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSP 560
YPYHYAPF SD++++S L I F LG+PF+PF+QL+ LPAAS + LP Y++LMT SP
Sbjct: 481 YPYHYAPFLSDIRNISTLRIHFELGKPFKPFEQLLAVLPAASKNLLPTCYQHLMTSEDSP 540
Query: 561 IYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRN 613
I ++YPPDF+ D+NGK+ W+ VV +PFIDEK LL + L +EE RN
Sbjct: 541 IIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEERKRN 593
>gi|154276492|ref|XP_001539091.1| hypothetical protein HCAG_06696 [Ajellomyces capsulatus NAm1]
gi|150414164|gb|EDN09529.1| hypothetical protein HCAG_06696 [Ajellomyces capsulatus NAm1]
Length = 475
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 225/426 (52%), Positives = 296/426 (69%), Gaps = 12/426 (2%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQ-VDGEGVARPVDVSKPNPNGMEFDNLYLDMNGI 59
MGVPA +RWL+ +YP I VVEE PQ +DGE V PVD +KPNPNG E DNLYLDMNGI
Sbjct: 1 MGVPALFRWLSSKYPKIISPVVEEIPQEIDGEEV--PVDTTKPNPNGEEMDNLYLDMNGI 58
Query: 60 IHPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRR 119
+HPC HPDGKP P + +D+ IF Y D + +VRPRKLL +A+DGVAPRAKMNQQR+RR
Sbjct: 59 VHPCTHPDGKPPPETEEDMMLEIFKYTDRVVNMVRPRKLLMIAVDGVAPRAKMNQQRSRR 118
Query: 120 FRAAKDAAEAEAEEER----LRKE-FEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAA 174
FR+A++A EA+ ++E LRK+ + G+ L + +T DSNVITPGT FM VL+AA
Sbjct: 119 FRSAQEAKEADEKKEEFAKLLRKQNGSKGGEGLVEEVITKTWDSNVITPGTPFMDVLAAA 178
Query: 175 LQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLD 234
L+Y++ +LN P W+ K+I+SDA VPGEGEHKIM +IR QR+ DPNTRH +YGLD
Sbjct: 179 LRYWVAYKLNTDPAWENLKIIISDATVPGEGEHKIMEFIRSQRSCAEHDPNTRHVIYGLD 238
Query: 235 ADLIMLSLATHEIHFSILRE-VITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWN-GV 292
ADLIML LATHE HF +LRE V + C +CGQ GH+A C G + +++
Sbjct: 239 ADLIMLGLATHEPHFRVLREDVFFQESKGRTCHLCGQTGHIAEACKGTAKEKNGEFDEKG 298
Query: 293 DDTPIHKKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMP 352
+P+ K + +L++ VLREYL E+ +P PFP + ER +DD+VF+CFFVGNDFLPH+P
Sbjct: 299 KGSPL--KPFIWLHVSVLREYLAVEMHVPQQPFPFDLERALDDWVFMCFFVGNDFLPHLP 356
Query: 353 TLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQ 412
+L+IRE I+ L+ ++R AM GYLT G V L R + +Q +A ED IF++R + +
Sbjct: 357 SLDIRENGIDTLIAIWRDNIPAMNGYLTKDGHVDLGRAQLILQGLAKQEDAIFRRRRQTE 416
Query: 413 QAYEYN 418
+ N
Sbjct: 417 ERKNAN 422
>gi|440293121|gb|ELP86283.1| 5'->3' exoribonuclease, putative [Entamoeba invadens IP1]
Length = 782
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 252/628 (40%), Positives = 363/628 (57%), Gaps = 46/628 (7%)
Query: 30 GEGVARPVDVSKPNPNGMEFDNLYLDMNGIIHPCFHPDGKPAPTSYDDVFKSIFDYIDHI 89
G D+ PN NG E DN YLDMNG+IHPCFHP +PAP + DD+ + Y+D+I
Sbjct: 4 GSDKTDHTDLDSPNLNGFEIDNFYLDMNGLIHPCFHPQDRPAPDTIDDMLIMLKRYLDYI 63
Query: 90 FLLVRPRKLLYLAIDGVAPRAKMNQQRTRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSA 149
+VRPRKL+Y+A+DGVAPRAKMNQQR RRF+AA+D A E + + G L A
Sbjct: 64 IDIVRPRKLVYMAVDGVAPRAKMNQQRARRFKAARDKKSAMDFEAQQAADALAKGTPLPA 123
Query: 150 KEKPETCDSNVITPGTQFMAVLSAALQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKI 209
+K DSN ITPGT FM + L+ +++ R++ W+ VI+SD++VPGEGEHKI
Sbjct: 124 SKK--EMDSNCITPGTVFMDRVIETLKAYVKERISTSAYWKKLVVIISDSSVPGEGEHKI 181
Query: 210 MSYIRLQRNLPGFDPNTRHCLYGLDADLIMLSLATHEIHFSILREVITLPGQQEKCFVCG 269
M YIR Q++ P ++PN HC+YGLDADLIML+LATHE +F ++RE + KC++CG
Sbjct: 182 MEYIRKQKDQPNYNPNLNHCIYGLDADLIMLTLATHERNFFVIREDVL----NTKCYICG 237
Query: 270 QVGHLAAECHGKPGDNPADWNGVDDTPIHKKKYQFLNIWVLREYLQYELDIPNPPFPINF 329
H A C K NP D PI+ K + F++I +R+ + +P +F
Sbjct: 238 G-AHPVAFCPKKNEINPMD-------PIN-KPFVFVSILDVRKLIYLLGMVPG----YDF 284
Query: 330 ERIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHVYRREFTAMGGYLTDAGEV---- 385
ERI+DDF+FLCFF+GNDFLPH P+LEI I+L+M +Y +EF GY+TDAG +
Sbjct: 285 ERIIDDFIFLCFFIGNDFLPHSPSLEIYHEDISLIMELY-KEFLLKNGYVTDAGNLDMAA 343
Query: 386 ---------------LLDRVEKFIQSVAVYEDQIFQKRTRI---QQAYEYNEAMKLNARR 427
L+D K + + +F+K+ +A + E + +
Sbjct: 344 FKNLLTFLSRNESGRLIDVANKKRMETTISSNHVFRKQLSAIAEAKANKQTEEFEKLTKE 403
Query: 428 ESSEELLQAPVAVADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVC 487
+ +L + V+ +PGY+ERYY K I +E KV +++V +YV+GL WV
Sbjct: 404 FTESKLKFNEMIFGGDVEYDKPGYEERYYNSKLHIDIVKEPKKV-EELVHEYVKGLVWVL 462
Query: 488 RYYYQDVCSWQWFYPYHYAPFASDLKDLSDL--EITFFLGEPFRPFDQLMGTLPAASSSA 545
+YYYQ W WF+P++YAPF +D+ D ITF EP P +QLM LP S
Sbjct: 463 KYYYQGCKGWGWFFPHNYAPFITDMAKYFDYTWNITFDFEEPSTPVEQLMSVLPPFSKKC 522
Query: 546 LPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLE-VF 604
+P+ R L+ +SP+ +FYP FQID +G + GVV LPFI+ LL+ + +E F
Sbjct: 523 VPKSCRALLNSETSPLKEFYPETFQIDFDGYAVEYLGVVLLPFIERPKLLKYLRPIEDAF 582
Query: 605 LTEEELFRNSVMLDLLYVHPQHPLYQQI 632
+ +++ + + +Y + +PL++ I
Sbjct: 583 VGDDKERNKASGVAHIYFYRNNPLFKNI 610
>gi|403304034|ref|XP_003942618.1| PREDICTED: 5'-3' exoribonuclease 1 isoform 1 [Saimiri boliviensis
boliviensis]
Length = 1706
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 254/653 (38%), Positives = 362/653 (55%), Gaps = 100/653 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP FYRW+++RYP + +VV+E Q+ EFDNLYLDMNGII
Sbjct: 1 MGVPKFYRWISERYPC-LSEVVKEH-QIP------------------EFDNLYLDMNGII 40
Query: 61 HPCFHPDGKPAP--TSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C HP+ S D +F IF Y++ +F +++PRK+ ++A+DGVAPRAKMNQQR R
Sbjct: 41 HQCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RFR+AK+A E++++K E+ G+ L + + DSN ITPGT+FMA L L+YF
Sbjct: 101 RFRSAKEA------EDKIKKAIEK-GETLPTEAR---FDSNCITPGTEFMARLHEHLKYF 150
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
+ +++ WQ + S PGEGEHKIM +IR ++ P DPNTRHCLYGLDADLI
Sbjct: 151 VNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLI 210
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
ML L +HE HFS+LRE + G++ + VC ++T H
Sbjct: 211 MLGLTSHEAHFSLLREEVRFGGKKTQ-RVCAP----------------------EETTFH 247
Query: 299 KKKYQFLNIWVLREYLQYELDI--PNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEI 356
L++ ++REY+ YE + PF + ERI+DD++ + F VGNDF+PH+P L I
Sbjct: 248 -----LLHLSLMREYIDYEFSVLKEKIPFKYDIERIIDDWILMGFLVGNDFIPHLPHLHI 302
Query: 357 REGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQK--------R 408
A+ LL Y +GGY+ ++G + L R EK++ ++ ++ + F +
Sbjct: 303 NHDALPLLYGTYITILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSEVFVDLKWFE 362
Query: 409 TRIQQAY-------------EYNEAMKLNARRES---------SEELLQAPVAVADTVKL 446
+++ Y Y E KL + S E++ + V D +
Sbjct: 363 SKVGNKYLNEAAGVAAEEARNYKEKKKLKGQENSLCWAALDKNEGEMVTSKDNVEDETED 422
Query: 447 GE------PGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWF 500
+ YK YY K + D D YV+ + W+ YYY V SW W+
Sbjct: 423 DDLFETEFRQYKRTYYMTKMGVDVVS--DDFLADQAACYVQAIQWILHYYYHGVQSWSWY 480
Query: 501 YPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSP 560
YPYHYAPF SD++++S L I F LG+PF+PF+QL+ LPAAS + LP Y++LMT SP
Sbjct: 481 YPYHYAPFLSDIRNISTLRIHFELGKPFKPFEQLLAVLPAASKNLLPTCYQHLMTSEDSP 540
Query: 561 IYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRN 613
I ++YPPDF+ D+NGK+ W+ VV +PFIDEK LL + L +EE RN
Sbjct: 541 IIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEERKRN 593
>gi|452820477|gb|EME27519.1| 5'-3' exoribonuclease [Galdieria sulphuraria]
Length = 1343
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 269/665 (40%), Positives = 367/665 (55%), Gaps = 100/665 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP FYRW+++RYPL+I VV + DN YLD NGI+
Sbjct: 1 MGVPKFYRWVSERYPLTIHKVVPS--------------------VVPDVDNFYLDANGIL 40
Query: 61 HPCFHP--DGKPAPTSY---DDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQ 115
H C P +P P Y +++F F+YID +F +VRP++L+Y+AIDGVAPRAKMNQQ
Sbjct: 41 HNCARPKDSQEPFPCQYPSEEEIFLETFNYIDMLFSMVRPKRLVYIAIDGVAPRAKMNQQ 100
Query: 116 RTRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETC-DSNVITPGTQFMAVLSAA 174
R RRFR AKD A+ E ++ K P+ DSN ITPGT FMA S A
Sbjct: 101 RARRFRTAKDRAQ------------EMENRIKQGKPVPQRFFDSNCITPGTHFMASFSEA 148
Query: 175 LQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLD 234
L+Y + ++ + W +VILS NVPGEGEHKI+ YIR ++ ++ N HCLYGLD
Sbjct: 149 LEYLVHKKITEDKSWATVEVILSTTNVPGEGEHKIIEYIRRKKLSGEWEANLSHCLYGLD 208
Query: 235 ADLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDD 294
ADLIMLSL THE HF +LRE L K FV + G+LA E
Sbjct: 209 ADLIMLSLVTHEPHFILLREQTDL----SKLFVSKK-GNLAVEA---------------- 247
Query: 295 TPIHK---KKYQFLNIWVLREYLQYELDIPNPPFPI---NFERIVDDFVFLCFFVGNDFL 348
TP+ + +++F +I VLREYL E PI N E + DF+F+CF VGNDFL
Sbjct: 248 TPLDRCISGEFEFFSIGVLREYLDSEF----CTLPITFYNLENCIHDFIFMCFLVGNDFL 303
Query: 349 PHMPTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKR 408
P +PTL I EGA++ ++ +Y++ GGYL + G ++L+R+E F+ + + E I +R
Sbjct: 304 PQLPTLNIAEGALDTMLTLYKKLLPLFGGYLIENGNIVLERLEIFLSKLGLLERLIVNRR 363
Query: 409 TR------------IQQAYEYNEAMKL-NARRESSEELLQAPVAVADTVKLGEPGY---- 451
+ +++ L N E++EE P D + Y
Sbjct: 364 LEAIAQSKGRAPRMVDIGTSHDDIWGLGNDCNENTEETGIEPWTKEDIEQALNEAYVAST 423
Query: 452 -------KERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYH 504
K+ YY DK + + E+ D ++K + Y++GL W +YYY SW+WFYPYH
Sbjct: 424 DPLMESIKKSYYRDKLNM-DLEDKDSLEK-LKFTYLKGLLWTWKYYYSGCPSWRWFYPYH 481
Query: 505 YAPFASDLKDLSDLE--ITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIY 562
YAP ASDL L+ + F EPF PF QL+ LP S+ LP + LM D SSPI+
Sbjct: 482 YAPMASDLVGLTGVTNICDFSASEPFLPFQQLLAVLPPQSAWCLPTALQKLMNDKSSPIF 541
Query: 563 KFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKL--EVFLTEEELFRNSVMLDLL 620
+FYP DF++DM+GKR AW+GV+KLPF+DE LLL + E+F +EEE RN+ ++
Sbjct: 542 RFYPSDFEVDMDGKRNAWEGVIKLPFVDESLLLEAYHSIPNELF-SEEERNRNACRQTMI 600
Query: 621 YVHPQ 625
Y Q
Sbjct: 601 YRRHQ 605
>gi|332232376|ref|XP_003265382.1| PREDICTED: 5'-3' exoribonuclease 1 isoform 2 [Nomascus leucogenys]
Length = 1693
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 263/707 (37%), Positives = 376/707 (53%), Gaps = 113/707 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP FYRW+++RYP + +VV+E Q+ EFDNLYLDMNGII
Sbjct: 1 MGVPKFYRWISERYPC-LSEVVKEH-QIP------------------EFDNLYLDMNGII 40
Query: 61 HPCFHPDGKPAP--TSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C HP+ S D +F IF Y++ +F +++PRK+ ++A+DGVAPRAKMNQQR R
Sbjct: 41 HQCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RFR+AK+A E++++K E+ G+ L + + DSN ITPGT+FMA L L+YF
Sbjct: 101 RFRSAKEA------EDKIKKAIEK-GETLPTEAR---FDSNCITPGTEFMARLHEHLKYF 150
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
+ +++ WQ + S PGEGEHKIM +IR ++ P DPNTRHCLYGLDADLI
Sbjct: 151 VNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLI 210
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
ML L +HE HFS+LRE + G++ + VC ++T H
Sbjct: 211 MLGLTSHEAHFSLLREEVRFGGKKTQ-RVCAP----------------------EETTFH 247
Query: 299 KKKYQFLNIWVLREYLQYELDI--PNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEI 356
L++ ++REY+ YE + F + ERI+DD++ + F VGNDF+PH+P L I
Sbjct: 248 -----LLHLSLMREYIDYEFSVLKEKITFKYDIERIIDDWILMGFLVGNDFIPHLPHLHI 302
Query: 357 REGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQK--------R 408
A+ LL Y +GGY+ ++G + L R EK++ ++ ++ + F +
Sbjct: 303 NHDALPLLYGTYITILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSEVFVDLKWFE 362
Query: 409 TRIQQAY-------------EYNEAMKLNARRES---------------SEELLQAPVAV 440
+++ Y Y E KL + S S++ L+
Sbjct: 363 SKVGNKYLNEAAGVAAEEARNYKEKKKLKGQENSLCWAALDKNEGEMVTSKDNLEDETED 422
Query: 441 ADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWF 500
D + YK YY K + D D YV+ + W+ YYY V SW W+
Sbjct: 423 DDLFETEFRQYKRTYYMTKMGVDVVS--DDFLADQAACYVQAIQWILHYYYHGVQSWSWY 480
Query: 501 YPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSP 560
YPYHYAPF SD++++S L+I F LG+PF+PF+QL+ LPAAS + LP Y++LMT SP
Sbjct: 481 YPYHYAPFLSDIRNISTLKIHFELGKPFKPFEQLLAVLPAASKNLLPTCYQHLMTSEDSP 540
Query: 561 IYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVM---- 616
I ++YPPDF+ D+NGK+ W+ VV +PFIDEK LL + L EE RN
Sbjct: 541 IIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKREERKRNQHSECLM 600
Query: 617 ------LDLLYVHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVNAS 657
+ +Y P + I C Y + AW ID+N +
Sbjct: 601 CWYDRDTEFIYPSPWPEKFPAIERCCTRYKIISLD---AWRIDINKN 644
>gi|403163709|ref|XP_003323763.2| hypothetical protein PGTG_05665 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375164418|gb|EFP79344.2| hypothetical protein PGTG_05665 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 1203
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 214/411 (52%), Positives = 291/411 (70%), Gaps = 7/411 (1%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQ---VDGEGVARPVDVSKPNPNGMEFDNLYLDMN 57
MGVPA +RWL+ +YP + V+E+ P VDG P+D+S+ NPNGMEFDNLYLDMN
Sbjct: 1 MGVPALFRWLSKKYPKVVEQVIEDVPAQNAVDGGTEEVPIDMSQRNPNGMEFDNLYLDMN 60
Query: 58 GIIHPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRT 117
GI+HPC HP+GK P + ++ +F Y + + +VRPRKLL +AIDGVAPRAKMNQQR+
Sbjct: 61 GIVHPCTHPEGKKPPETEAEMMIEVFKYTERVVNMVRPRKLLMIAIDGVAPRAKMNQQRS 120
Query: 118 RRFRAAKDAAEAEAEEERLRKEFEEAGKLLSA--KEKPETCDSNVITPGTQFMAVLSAAL 175
RRFRAA++A E E++ L +E+++ GK L K + DSN ITPGT FM +L+ +L
Sbjct: 121 RRFRAAQEAKVKEEEKQALIEEYKQQGKELPEDYKTDKKAWDSNAITPGTPFMTLLTESL 180
Query: 176 QYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDA 235
+Y+I ++N GW +VILSDA+VPGEGEHKIM ++R QR P +DPNT+H +YGLDA
Sbjct: 181 RYWIVYKMNTDKGWSQIQVILSDASVPGEGEHKIMDFVRRQRTQPSYDPNTKHVIYGLDA 240
Query: 236 DLIMLSLATHEIHFSILREVITLPGQQEK-CFVCGQVGHLAAECHGKPGDNPADWNGVDD 294
DLIMLSLATHE HF +LRE + ++ K C+ CGQ+GH +++C GKP + D +
Sbjct: 241 DLIMLSLATHEPHFKVLREDVFADQKKGKGCYTCGQLGHHSSQCQGKPKEK-VDEHDTKQ 299
Query: 295 TPIHKKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTL 354
P+ +K + FL++ +LREYL EL+I PFP + ER +DD+V L FFVGNDFLPH+P+L
Sbjct: 300 KPVERKPFIFLDVGILREYLAIELNIGGLPFPFDIERAIDDWVLLIFFVGNDFLPHLPSL 359
Query: 355 EIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIF 405
EIREGAI+ L+ +++ MGG+LTD G + L R E ++ +A ED+IF
Sbjct: 360 EIREGAIDTLLKIWKTNLGRMGGFLTDCGALNLKRTEIILEGLASREDEIF 410
Score = 212 bits (539), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 113/254 (44%), Positives = 155/254 (61%), Gaps = 11/254 (4%)
Query: 442 DTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFY 501
DTVKL EPGY+ERY+ KF I +E++K K +V YVEGL WV YYYQ SWQWFY
Sbjct: 694 DTVKLWEPGYRERYFRQKFGIELNDEVEKRK--IVKHYVEGLAWVLAYYYQGCQSWQWFY 751
Query: 502 PYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPI 561
PYHY+PFASD +L + EI F LG+PF+P++QLMG PAAS +P+ Y +LM + SPI
Sbjct: 752 PYHYSPFASDFTNLEEFEIKFNLGQPFKPYEQLMGVFPAASRCHIPDVYHDLMMNDDSPI 811
Query: 562 YKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLY 621
FYP +F+IDMNGK+ WQGV LPFI++ LL K E L E+ RN +++
Sbjct: 812 KDFYPEEFEIDMNGKKMLWQGVALLPFIEQDRLLNSMKDCEDRLAPEDKIRNEPGHVVMF 871
Query: 622 VHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVNASGGMNGYIWLCERN---GLRSIIPS 678
HP Y+ +C++Y + ++ A +D + G+ G L + + G P
Sbjct: 872 CGEAHPQYEN---FCKIYQKR--DNKEAVTLDPAHANGVFGSA-LPDPDCIPGSTFYSPL 925
Query: 679 PVKGLPDIERNQAM 692
P GLPDI ++++
Sbjct: 926 PTVGLPDISNDKSI 939
>gi|50949885|emb|CAH10490.1| hypothetical protein [Homo sapiens]
gi|119599378|gb|EAW78972.1| 5'-3' exoribonuclease 1, isoform CRA_b [Homo sapiens]
Length = 1694
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 262/707 (37%), Positives = 377/707 (53%), Gaps = 113/707 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP FYRW+++RYP + +VV+E Q+ EFDNLYLDMNGII
Sbjct: 1 MGVPKFYRWISERYPC-LSEVVKEH-QIP------------------EFDNLYLDMNGII 40
Query: 61 HPCFHPDGKPAP--TSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C HP+ S D +F IF Y++ +F +++PRK+ ++A+DGVAPRAKMNQQR R
Sbjct: 41 HQCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RFR+AK+A E++++K E+ G+ L + + DSN ITPGT+FMA L L+YF
Sbjct: 101 RFRSAKEA------EDKIKKAIEK-GETLPTEAR---FDSNCITPGTEFMARLHEHLKYF 150
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
+ +++ WQ + S PGEGEHKIM +IR ++ P DPNTRHCLYGLDADLI
Sbjct: 151 VNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLI 210
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
ML L +HE HFS+LRE + G++ + VC ++T H
Sbjct: 211 MLGLTSHEAHFSLLREEVRFGGKKTQ-RVCAP----------------------EETTFH 247
Query: 299 KKKYQFLNIWVLREYLQYELDI--PNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEI 356
L++ ++REY+ YE + F + ERI+DD++ + F VGNDF+PH+P L I
Sbjct: 248 -----LLHLSLMREYIDYEFSVLKEKITFKYDIERIIDDWILMGFLVGNDFIPHLPHLHI 302
Query: 357 REGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQK--------R 408
A+ LL Y +GGY+ ++G + L R EK++ ++ ++ + F +
Sbjct: 303 NHDALPLLYGTYVTILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSEVFVDLKWFE 362
Query: 409 TRIQQAY-------------EYNEAMKLNARRES---------------SEELLQAPVAV 440
+++ Y Y E KL + S S++ L+
Sbjct: 363 SKVGNKYLNEAAGVAAEEARNYKEKKKLKGQENSLCWTALDKNEGEMITSKDNLEDETED 422
Query: 441 ADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWF 500
D + YK YY K + D D YV+ + W+ YYY V SW W+
Sbjct: 423 DDLFETEFRQYKRTYYMTKMGVDVVS--DDFLADQAACYVQAIQWILHYYYHGVQSWSWY 480
Query: 501 YPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSP 560
YPYHYAPF SD+ ++S L+I F LG+PF+PF+QL+ LPAAS + LP Y++LMT+ SP
Sbjct: 481 YPYHYAPFLSDIHNISTLKIHFELGKPFKPFEQLLAVLPAASKNLLPACYQHLMTNEDSP 540
Query: 561 IYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVM---- 616
I ++YPPDF+ D+NGK+ W+ VV +PFIDEK LL + L +EE RN
Sbjct: 541 IIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEERKRNQHSECLM 600
Query: 617 ------LDLLYVHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVNAS 657
+ +Y P + I C Y + AW +D+N +
Sbjct: 601 CWYDRDTEFIYPSPWPEKFPAIERCCTRYKIISLD---AWRVDINKN 644
>gi|410266384|gb|JAA21158.1| 5'-3' exoribonuclease 1 [Pan troglodytes]
Length = 1693
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 255/661 (38%), Positives = 364/661 (55%), Gaps = 100/661 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP FYRW+++RYP + +VV+E Q+ EFDNLYLDMNGII
Sbjct: 1 MGVPKFYRWISERYPC-LSEVVKEH-QIP------------------EFDNLYLDMNGII 40
Query: 61 HPCFHPDGKPAP--TSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C HP+ S D +F IF Y++ +F +++PRK+ ++A+DGVAPRAKMNQQR R
Sbjct: 41 HHCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RFR+AK+A E++++K E+ G+ L + + DSN ITPGT+FMA L L+YF
Sbjct: 101 RFRSAKEA------EDKIKKAVEK-GETLPTEAR---FDSNCITPGTEFMARLHEHLKYF 150
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
+ +++ WQ + S PGEGEHKIM +IR ++ P DPNTRHCLYGLDADLI
Sbjct: 151 VNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLI 210
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
ML L +HE HFS+LRE + G++ + VC ++T H
Sbjct: 211 MLGLTSHEAHFSLLREEVRFGGKKTQ-RVCAP----------------------EETTFH 247
Query: 299 KKKYQFLNIWVLREYLQYELDI--PNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEI 356
L++ ++REY+ YE + F + ERI+DD++ + F VGNDF+PH+P L I
Sbjct: 248 -----LLHLSLMREYIDYEFSVLKEKITFKYDIERIIDDWILMGFLVGNDFIPHLPHLHI 302
Query: 357 REGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQK--------R 408
A+ LL Y +GGY+ ++G + L R EK++ ++ ++ + F +
Sbjct: 303 NHDALPLLYGTYVTILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSEVFVDLKWFE 362
Query: 409 TRIQQAY-------------EYNEAMKLNARRES---------------SEELLQAPVAV 440
+++ Y Y E KL + S S++ L+
Sbjct: 363 SKVGNKYLNEAAGVAAEEARNYKEKKKLKGQENSLCWAALDKNEGEMITSKDNLEDETED 422
Query: 441 ADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWF 500
D + YK YY K + D D YV+ + W+ YYY V SW W+
Sbjct: 423 DDLFETEFRQYKRTYYMTKMGVDVVS--DDFLADQAACYVQAIQWILHYYYHGVQSWSWY 480
Query: 501 YPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSP 560
YPYHYAPF SD+ ++S L+I F LG+PF+PF+QL+ LPAAS + LP Y++LMT+ SP
Sbjct: 481 YPYHYAPFLSDIHNISTLKIHFELGKPFKPFEQLLAVLPAASKNLLPACYQHLMTNEDSP 540
Query: 561 IYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLL 620
I ++YPPDF+ D+NGK+ W+ VV +PFIDEK LL + L +EE RN L+
Sbjct: 541 IIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEERKRNQHSECLM 600
Query: 621 Y 621
Y
Sbjct: 601 Y 601
>gi|332818029|ref|XP_516791.3| PREDICTED: 5'-3' exoribonuclease 1 isoform 2 [Pan troglodytes]
Length = 1692
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 255/661 (38%), Positives = 364/661 (55%), Gaps = 100/661 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP FYRW+++RYP + +VV+E Q+ EFDNLYLDMNGII
Sbjct: 1 MGVPKFYRWISERYPC-LSEVVKEH-QIP------------------EFDNLYLDMNGII 40
Query: 61 HPCFHPDGKPAP--TSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C HP+ S D +F IF Y++ +F +++PRK+ ++A+DGVAPRAKMNQQR R
Sbjct: 41 HHCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RFR+AK+A E++++K E+ G+ L + + DSN ITPGT+FMA L L+YF
Sbjct: 101 RFRSAKEA------EDKIKKAVEK-GETLPTEAR---FDSNCITPGTEFMARLHEHLKYF 150
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
+ +++ WQ + S PGEGEHKIM +IR ++ P DPNTRHCLYGLDADLI
Sbjct: 151 VNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLI 210
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
ML L +HE HFS+LRE + G++ + VC ++T H
Sbjct: 211 MLGLTSHEAHFSLLREEVRFGGKKTQ-RVCAP----------------------EETTFH 247
Query: 299 KKKYQFLNIWVLREYLQYELDI--PNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEI 356
L++ ++REY+ YE + F + ERI+DD++ + F VGNDF+PH+P L I
Sbjct: 248 -----LLHLSLMREYIDYEFSVLKEKITFKYDIERIIDDWILMGFLVGNDFIPHLPHLHI 302
Query: 357 REGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQK--------R 408
A+ LL Y +GGY+ ++G + L R EK++ ++ ++ + F +
Sbjct: 303 NHDALPLLYGTYVTILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSEVFVDLKWFE 362
Query: 409 TRIQQAY-------------EYNEAMKLNARRES---------------SEELLQAPVAV 440
+++ Y Y E KL + S S++ L+
Sbjct: 363 SKVGNKYLNEAAGVAAEEARNYKEKKKLKGQENSLCWAALDKNEGEMITSKDNLEDETED 422
Query: 441 ADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWF 500
D + YK YY K + D D YV+ + W+ YYY V SW W+
Sbjct: 423 DDLFETEFRQYKRTYYMTKMGVDVVS--DDFLADQAACYVQAIQWILHYYYHGVQSWSWY 480
Query: 501 YPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSP 560
YPYHYAPF SD+ ++S L+I F LG+PF+PF+QL+ LPAAS + LP Y++LMT+ SP
Sbjct: 481 YPYHYAPFLSDIHNISTLKIHFELGKPFKPFEQLLAVLPAASKNLLPACYQHLMTNEDSP 540
Query: 561 IYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLL 620
I ++YPPDF+ D+NGK+ W+ VV +PFIDEK LL + L +EE RN L+
Sbjct: 541 IIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEERKRNQHSECLM 600
Query: 621 Y 621
Y
Sbjct: 601 Y 601
>gi|110624792|ref|NP_061874.3| 5'-3' exoribonuclease 1 isoform a [Homo sapiens]
gi|74714582|sp|Q8IZH2.1|XRN1_HUMAN RecName: Full=5'-3' exoribonuclease 1; AltName:
Full=Strand-exchange protein 1 homolog
gi|24474444|gb|AAN11306.1| DNA strand-exchange protein SEP1 [Homo sapiens]
gi|119599377|gb|EAW78971.1| 5'-3' exoribonuclease 1, isoform CRA_a [Homo sapiens]
gi|146327192|gb|AAI41556.1| 5'-3' exoribonuclease 1 [synthetic construct]
gi|261857762|dbj|BAI45403.1| 5'-3' exoribonuclease 1 [synthetic construct]
Length = 1706
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 262/707 (37%), Positives = 377/707 (53%), Gaps = 113/707 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP FYRW+++RYP + +VV+E Q+ EFDNLYLDMNGII
Sbjct: 1 MGVPKFYRWISERYPC-LSEVVKEH-QIP------------------EFDNLYLDMNGII 40
Query: 61 HPCFHPDGKPAP--TSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C HP+ S D +F IF Y++ +F +++PRK+ ++A+DGVAPRAKMNQQR R
Sbjct: 41 HQCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RFR+AK+A E++++K E+ G+ L + + DSN ITPGT+FMA L L+YF
Sbjct: 101 RFRSAKEA------EDKIKKAIEK-GETLPTEAR---FDSNCITPGTEFMARLHEHLKYF 150
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
+ +++ WQ + S PGEGEHKIM +IR ++ P DPNTRHCLYGLDADLI
Sbjct: 151 VNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLI 210
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
ML L +HE HFS+LRE + G++ + VC ++T H
Sbjct: 211 MLGLTSHEAHFSLLREEVRFGGKKTQ-RVCAP----------------------EETTFH 247
Query: 299 KKKYQFLNIWVLREYLQYELDI--PNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEI 356
L++ ++REY+ YE + F + ERI+DD++ + F VGNDF+PH+P L I
Sbjct: 248 -----LLHLSLMREYIDYEFSVLKEKITFKYDIERIIDDWILMGFLVGNDFIPHLPHLHI 302
Query: 357 REGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQK--------R 408
A+ LL Y +GGY+ ++G + L R EK++ ++ ++ + F +
Sbjct: 303 NHDALPLLYGTYVTILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSEVFVDLKWFE 362
Query: 409 TRIQQAY-------------EYNEAMKLNARRES---------------SEELLQAPVAV 440
+++ Y Y E KL + S S++ L+
Sbjct: 363 SKVGNKYLNEAAGVAAEEARNYKEKKKLKGQENSLCWTALDKNEGEMITSKDNLEDETED 422
Query: 441 ADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWF 500
D + YK YY K + D D YV+ + W+ YYY V SW W+
Sbjct: 423 DDLFETEFRQYKRTYYMTKMGVDVVS--DDFLADQAACYVQAIQWILHYYYHGVQSWSWY 480
Query: 501 YPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSP 560
YPYHYAPF SD+ ++S L+I F LG+PF+PF+QL+ LPAAS + LP Y++LMT+ SP
Sbjct: 481 YPYHYAPFLSDIHNISTLKIHFELGKPFKPFEQLLAVLPAASKNLLPACYQHLMTNEDSP 540
Query: 561 IYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVM---- 616
I ++YPPDF+ D+NGK+ W+ VV +PFIDEK LL + L +EE RN
Sbjct: 541 IIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEERKRNQHSECLM 600
Query: 617 ------LDLLYVHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVNAS 657
+ +Y P + I C Y + AW +D+N +
Sbjct: 601 CWYDRDTEFIYPSPWPEKFPAIERCCTRYKIISLD---AWRVDINKN 644
>gi|397512470|ref|XP_003826568.1| PREDICTED: 5'-3' exoribonuclease 1 isoform 2 [Pan paniscus]
Length = 1693
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 255/661 (38%), Positives = 364/661 (55%), Gaps = 100/661 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP FYRW+++RYP + +VV+E Q+ EFDNLYLDMNGII
Sbjct: 1 MGVPKFYRWISERYPC-LSEVVKEH-QIP------------------EFDNLYLDMNGII 40
Query: 61 HPCFHPDGKPAP--TSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C HP+ S D +F IF Y++ +F +++PRK+ ++A+DGVAPRAKMNQQR R
Sbjct: 41 HHCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RFR+AK+A E++++K E+ G+ L + + DSN ITPGT+FMA L L+YF
Sbjct: 101 RFRSAKEA------EDKIKKAVEK-GETLPTEAR---FDSNCITPGTEFMARLHEHLKYF 150
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
+ +++ WQ + S PGEGEHKIM +IR ++ P DPNTRHCLYGLDADLI
Sbjct: 151 VNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLI 210
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
ML L +HE HFS+LRE + G++ + VC ++T H
Sbjct: 211 MLGLTSHEAHFSLLREEVRFGGKKTQ-RVCAP----------------------EETTFH 247
Query: 299 KKKYQFLNIWVLREYLQYELDI--PNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEI 356
L++ ++REY+ YE + F + ERI+DD++ + F VGNDF+PH+P L I
Sbjct: 248 -----LLHLSLMREYIDYEFSVLKEKITFKYDIERIIDDWILMGFLVGNDFIPHLPHLHI 302
Query: 357 REGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQK--------R 408
A+ LL Y +GGY+ ++G + L R EK++ ++ ++ + F +
Sbjct: 303 NHDALPLLYGTYVTILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSEVFVDLKWFE 362
Query: 409 TRIQQAY-------------EYNEAMKLNARRES---------------SEELLQAPVAV 440
+++ Y Y E KL + S S++ L+
Sbjct: 363 SKVGNKYLNEAAGVAAEEARNYKEKKKLKGQENSLCWAALDKNEGEMITSKDNLEDETED 422
Query: 441 ADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWF 500
D + YK YY K + D D YV+ + W+ YYY V SW W+
Sbjct: 423 DDLFETEFRQYKRTYYMTKMGVDVVS--DDFLADQAACYVQAIQWILHYYYHGVQSWSWY 480
Query: 501 YPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSP 560
YPYHYAPF SD+ ++S L+I F LG+PF+PF+QL+ LPAAS + LP Y++LMT+ SP
Sbjct: 481 YPYHYAPFLSDIHNISTLKIHFELGKPFKPFEQLLAVLPAASKNLLPACYQHLMTNEDSP 540
Query: 561 IYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLL 620
I ++YPPDF+ D+NGK+ W+ VV +PFIDEK LL + L +EE RN L+
Sbjct: 541 IIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEERKRNQHSECLM 600
Query: 621 Y 621
Y
Sbjct: 601 Y 601
>gi|410266386|gb|JAA21159.1| 5'-3' exoribonuclease 1 [Pan troglodytes]
Length = 1706
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 255/661 (38%), Positives = 364/661 (55%), Gaps = 100/661 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP FYRW+++RYP + +VV+E Q+ EFDNLYLDMNGII
Sbjct: 1 MGVPKFYRWISERYPC-LSEVVKEH-QIP------------------EFDNLYLDMNGII 40
Query: 61 HPCFHPDGKPAP--TSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C HP+ S D +F IF Y++ +F +++PRK+ ++A+DGVAPRAKMNQQR R
Sbjct: 41 HHCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RFR+AK+A E++++K E+ G+ L + + DSN ITPGT+FMA L L+YF
Sbjct: 101 RFRSAKEA------EDKIKKAVEK-GETLPTEAR---FDSNCITPGTEFMARLHEHLKYF 150
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
+ +++ WQ + S PGEGEHKIM +IR ++ P DPNTRHCLYGLDADLI
Sbjct: 151 VNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLI 210
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
ML L +HE HFS+LRE + G++ + VC ++T H
Sbjct: 211 MLGLTSHEAHFSLLREEVRFGGKKTQ-RVCAP----------------------EETTFH 247
Query: 299 KKKYQFLNIWVLREYLQYELDI--PNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEI 356
L++ ++REY+ YE + F + ERI+DD++ + F VGNDF+PH+P L I
Sbjct: 248 -----LLHLSLMREYIDYEFSVLKEKITFKYDIERIIDDWILMGFLVGNDFIPHLPHLHI 302
Query: 357 REGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQK--------R 408
A+ LL Y +GGY+ ++G + L R EK++ ++ ++ + F +
Sbjct: 303 NHDALPLLYGTYVTILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSEVFVDLKWFE 362
Query: 409 TRIQQAY-------------EYNEAMKLNARRES---------------SEELLQAPVAV 440
+++ Y Y E KL + S S++ L+
Sbjct: 363 SKVGNKYLNEAAGVAAEEARNYKEKKKLKGQENSLCWAALDKNEGEMITSKDNLEDETED 422
Query: 441 ADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWF 500
D + YK YY K + D D YV+ + W+ YYY V SW W+
Sbjct: 423 DDLFETEFRQYKRTYYMTKMGVDVVS--DDFLADQAACYVQAIQWILHYYYHGVQSWSWY 480
Query: 501 YPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSP 560
YPYHYAPF SD+ ++S L+I F LG+PF+PF+QL+ LPAAS + LP Y++LMT+ SP
Sbjct: 481 YPYHYAPFLSDIHNISTLKIHFELGKPFKPFEQLLAVLPAASKNLLPACYQHLMTNEDSP 540
Query: 561 IYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLL 620
I ++YPPDF+ D+NGK+ W+ VV +PFIDEK LL + L +EE RN L+
Sbjct: 541 IIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEERKRNQHSECLM 600
Query: 621 Y 621
Y
Sbjct: 601 Y 601
>gi|410341471|gb|JAA39682.1| 5'-3' exoribonuclease 1 [Pan troglodytes]
Length = 1693
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 255/661 (38%), Positives = 364/661 (55%), Gaps = 100/661 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP FYRW+++RYP + +VV+E Q+ EFDNLYLDMNGII
Sbjct: 1 MGVPKFYRWISERYPC-LSEVVKEH-QIP------------------EFDNLYLDMNGII 40
Query: 61 HPCFHPDGKPAP--TSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C HP+ S D +F IF Y++ +F +++PRK+ ++A+DGVAPRAKMNQQR R
Sbjct: 41 HHCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RFR+AK+A E++++K E+ G+ L + + DSN ITPGT+FMA L L+YF
Sbjct: 101 RFRSAKEA------EDKIKKAVEK-GETLPTEAR---FDSNCITPGTEFMARLHEHLKYF 150
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
+ +++ WQ + S PGEGEHKIM +IR ++ P DPNTRHCLYGLDADLI
Sbjct: 151 VNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLI 210
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
ML L +HE HFS+LRE + G++ + VC ++T H
Sbjct: 211 MLGLTSHEAHFSLLREEVRFGGKKTQ-RVCAP----------------------EETTFH 247
Query: 299 KKKYQFLNIWVLREYLQYELDI--PNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEI 356
L++ ++REY+ YE + F + ERI+DD++ + F VGNDF+PH+P L I
Sbjct: 248 -----LLHLSLMREYIDYEFSVLKEKITFKYDIERIIDDWILMGFLVGNDFIPHLPHLHI 302
Query: 357 REGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQK--------R 408
A+ LL Y +GGY+ ++G + L R EK++ ++ ++ + F +
Sbjct: 303 NHDALPLLYGTYVTILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSEVFVDLKWFE 362
Query: 409 TRIQQAY-------------EYNEAMKLNARRES---------------SEELLQAPVAV 440
+++ Y Y E KL + S S++ L+
Sbjct: 363 SKVGNKYLNEAAGVAAEEARNYKEKKKLKGQENSLCWAALDKNEGEMITSKDNLEDETED 422
Query: 441 ADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWF 500
D + YK YY K + D D YV+ + W+ YYY V SW W+
Sbjct: 423 DDLFETEFRQYKRTYYMTKMGVDVVS--DDFLADQAACYVQAIQWILHYYYHGVQSWSWY 480
Query: 501 YPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSP 560
YPYHYAPF SD+ ++S L+I F LG+PF+PF+QL+ LPAAS + LP Y++LMT+ SP
Sbjct: 481 YPYHYAPFLSDIHNISTLKIHFELGKPFKPFEQLLAVLPAASKNLLPACYQHLMTNEDSP 540
Query: 561 IYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLL 620
I ++YPPDF+ D+NGK+ W+ VV +PFIDEK LL + L +EE RN L+
Sbjct: 541 IIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEERKRNQHSECLM 600
Query: 621 Y 621
Y
Sbjct: 601 Y 601
>gi|332232374|ref|XP_003265381.1| PREDICTED: 5'-3' exoribonuclease 1 isoform 1 [Nomascus leucogenys]
Length = 1706
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 263/707 (37%), Positives = 376/707 (53%), Gaps = 113/707 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP FYRW+++RYP + +VV+E Q+ EFDNLYLDMNGII
Sbjct: 1 MGVPKFYRWISERYPC-LSEVVKEH-QIP------------------EFDNLYLDMNGII 40
Query: 61 HPCFHPDGKPAP--TSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C HP+ S D +F IF Y++ +F +++PRK+ ++A+DGVAPRAKMNQQR R
Sbjct: 41 HQCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RFR+AK+A E++++K E+ G+ L + + DSN ITPGT+FMA L L+YF
Sbjct: 101 RFRSAKEA------EDKIKKAIEK-GETLPTEAR---FDSNCITPGTEFMARLHEHLKYF 150
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
+ +++ WQ + S PGEGEHKIM +IR ++ P DPNTRHCLYGLDADLI
Sbjct: 151 VNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLI 210
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
ML L +HE HFS+LRE + G++ + VC ++T H
Sbjct: 211 MLGLTSHEAHFSLLREEVRFGGKKTQ-RVCAP----------------------EETTFH 247
Query: 299 KKKYQFLNIWVLREYLQYELDI--PNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEI 356
L++ ++REY+ YE + F + ERI+DD++ + F VGNDF+PH+P L I
Sbjct: 248 -----LLHLSLMREYIDYEFSVLKEKITFKYDIERIIDDWILMGFLVGNDFIPHLPHLHI 302
Query: 357 REGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQK--------R 408
A+ LL Y +GGY+ ++G + L R EK++ ++ ++ + F +
Sbjct: 303 NHDALPLLYGTYITILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSEVFVDLKWFE 362
Query: 409 TRIQQAY-------------EYNEAMKLNARRES---------------SEELLQAPVAV 440
+++ Y Y E KL + S S++ L+
Sbjct: 363 SKVGNKYLNEAAGVAAEEARNYKEKKKLKGQENSLCWAALDKNEGEMVTSKDNLEDETED 422
Query: 441 ADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWF 500
D + YK YY K + D D YV+ + W+ YYY V SW W+
Sbjct: 423 DDLFETEFRQYKRTYYMTKMGVDVVS--DDFLADQAACYVQAIQWILHYYYHGVQSWSWY 480
Query: 501 YPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSP 560
YPYHYAPF SD++++S L+I F LG+PF+PF+QL+ LPAAS + LP Y++LMT SP
Sbjct: 481 YPYHYAPFLSDIRNISTLKIHFELGKPFKPFEQLLAVLPAASKNLLPTCYQHLMTSEDSP 540
Query: 561 IYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVM---- 616
I ++YPPDF+ D+NGK+ W+ VV +PFIDEK LL + L EE RN
Sbjct: 541 IIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKREERKRNQHSECLM 600
Query: 617 ------LDLLYVHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVNAS 657
+ +Y P + I C Y + AW ID+N +
Sbjct: 601 CWYDRDTEFIYPSPWPEKFPAIERCCTRYKIISLD---AWRIDINKN 644
>gi|397512468|ref|XP_003826567.1| PREDICTED: 5'-3' exoribonuclease 1 isoform 1 [Pan paniscus]
Length = 1705
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 255/661 (38%), Positives = 364/661 (55%), Gaps = 100/661 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP FYRW+++RYP + +VV+E Q+ EFDNLYLDMNGII
Sbjct: 1 MGVPKFYRWISERYPC-LSEVVKEH-QIP------------------EFDNLYLDMNGII 40
Query: 61 HPCFHPDGKPAP--TSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C HP+ S D +F IF Y++ +F +++PRK+ ++A+DGVAPRAKMNQQR R
Sbjct: 41 HHCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RFR+AK+A E++++K E+ G+ L + + DSN ITPGT+FMA L L+YF
Sbjct: 101 RFRSAKEA------EDKIKKAVEK-GETLPTEAR---FDSNCITPGTEFMARLHEHLKYF 150
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
+ +++ WQ + S PGEGEHKIM +IR ++ P DPNTRHCLYGLDADLI
Sbjct: 151 VNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLI 210
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
ML L +HE HFS+LRE + G++ + VC ++T H
Sbjct: 211 MLGLTSHEAHFSLLREEVRFGGKKTQ-RVCAP----------------------EETTFH 247
Query: 299 KKKYQFLNIWVLREYLQYELDI--PNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEI 356
L++ ++REY+ YE + F + ERI+DD++ + F VGNDF+PH+P L I
Sbjct: 248 -----LLHLSLMREYIDYEFSVLKEKITFKYDIERIIDDWILMGFLVGNDFIPHLPHLHI 302
Query: 357 REGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQK--------R 408
A+ LL Y +GGY+ ++G + L R EK++ ++ ++ + F +
Sbjct: 303 NHDALPLLYGTYVTILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSEVFVDLKWFE 362
Query: 409 TRIQQAY-------------EYNEAMKLNARRES---------------SEELLQAPVAV 440
+++ Y Y E KL + S S++ L+
Sbjct: 363 SKVGNKYLNEAAGVAAEEARNYKEKKKLKGQENSLCWAALDKNEGEMITSKDNLEDETED 422
Query: 441 ADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWF 500
D + YK YY K + D D YV+ + W+ YYY V SW W+
Sbjct: 423 DDLFETEFRQYKRTYYMTKMGVDVVS--DDFLADQAACYVQAIQWILHYYYHGVQSWSWY 480
Query: 501 YPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSP 560
YPYHYAPF SD+ ++S L+I F LG+PF+PF+QL+ LPAAS + LP Y++LMT+ SP
Sbjct: 481 YPYHYAPFLSDIHNISTLKIHFELGKPFKPFEQLLAVLPAASKNLLPACYQHLMTNEDSP 540
Query: 561 IYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLL 620
I ++YPPDF+ D+NGK+ W+ VV +PFIDEK LL + L +EE RN L+
Sbjct: 541 IIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEERKRNQHSECLM 600
Query: 621 Y 621
Y
Sbjct: 601 Y 601
>gi|114589588|ref|XP_001161640.1| PREDICTED: 5'-3' exoribonuclease 1 isoform 1 [Pan troglodytes]
Length = 1705
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 255/661 (38%), Positives = 364/661 (55%), Gaps = 100/661 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP FYRW+++RYP + +VV+E Q+ EFDNLYLDMNGII
Sbjct: 1 MGVPKFYRWISERYPC-LSEVVKEH-QIP------------------EFDNLYLDMNGII 40
Query: 61 HPCFHPDGKPAP--TSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C HP+ S D +F IF Y++ +F +++PRK+ ++A+DGVAPRAKMNQQR R
Sbjct: 41 HHCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RFR+AK+A E++++K E+ G+ L + + DSN ITPGT+FMA L L+YF
Sbjct: 101 RFRSAKEA------EDKIKKAVEK-GETLPTEAR---FDSNCITPGTEFMARLHEHLKYF 150
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
+ +++ WQ + S PGEGEHKIM +IR ++ P DPNTRHCLYGLDADLI
Sbjct: 151 VNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLI 210
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
ML L +HE HFS+LRE + G++ + VC ++T H
Sbjct: 211 MLGLTSHEAHFSLLREEVRFGGKKTQ-RVCAP----------------------EETTFH 247
Query: 299 KKKYQFLNIWVLREYLQYELDI--PNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEI 356
L++ ++REY+ YE + F + ERI+DD++ + F VGNDF+PH+P L I
Sbjct: 248 -----LLHLSLMREYIDYEFSVLKEKITFKYDIERIIDDWILMGFLVGNDFIPHLPHLHI 302
Query: 357 REGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQK--------R 408
A+ LL Y +GGY+ ++G + L R EK++ ++ ++ + F +
Sbjct: 303 NHDALPLLYGTYVTILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSEVFVDLKWFE 362
Query: 409 TRIQQAY-------------EYNEAMKLNARRES---------------SEELLQAPVAV 440
+++ Y Y E KL + S S++ L+
Sbjct: 363 SKVGNKYLNEAAGVAAEEARNYKEKKKLKGQENSLCWAALDKNEGEMITSKDNLEDETED 422
Query: 441 ADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWF 500
D + YK YY K + D D YV+ + W+ YYY V SW W+
Sbjct: 423 DDLFETEFRQYKRTYYMTKMGVDVVS--DDFLADQAACYVQAIQWILHYYYHGVQSWSWY 480
Query: 501 YPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSP 560
YPYHYAPF SD+ ++S L+I F LG+PF+PF+QL+ LPAAS + LP Y++LMT+ SP
Sbjct: 481 YPYHYAPFLSDIHNISTLKIHFELGKPFKPFEQLLAVLPAASKNLLPACYQHLMTNEDSP 540
Query: 561 IYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLL 620
I ++YPPDF+ D+NGK+ W+ VV +PFIDEK LL + L +EE RN L+
Sbjct: 541 IIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEERKRNQHSECLM 600
Query: 621 Y 621
Y
Sbjct: 601 Y 601
>gi|110624787|ref|NP_001036069.1| 5'-3' exoribonuclease 1 isoform b [Homo sapiens]
Length = 1693
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 262/707 (37%), Positives = 377/707 (53%), Gaps = 113/707 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP FYRW+++RYP + +VV+E Q+ EFDNLYLDMNGII
Sbjct: 1 MGVPKFYRWISERYPC-LSEVVKEH-QIP------------------EFDNLYLDMNGII 40
Query: 61 HPCFHPDGKPAP--TSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C HP+ S D +F IF Y++ +F +++PRK+ ++A+DGVAPRAKMNQQR R
Sbjct: 41 HQCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RFR+AK+A E++++K E+ G+ L + + DSN ITPGT+FMA L L+YF
Sbjct: 101 RFRSAKEA------EDKIKKAIEK-GETLPTEAR---FDSNCITPGTEFMARLHEHLKYF 150
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
+ +++ WQ + S PGEGEHKIM +IR ++ P DPNTRHCLYGLDADLI
Sbjct: 151 VNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLI 210
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
ML L +HE HFS+LRE + G++ + VC ++T H
Sbjct: 211 MLGLTSHEAHFSLLREEVRFGGKKTQ-RVCAP----------------------EETTFH 247
Query: 299 KKKYQFLNIWVLREYLQYELDI--PNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEI 356
L++ ++REY+ YE + F + ERI+DD++ + F VGNDF+PH+P L I
Sbjct: 248 -----LLHLSLMREYIDYEFSVLKEKITFKYDIERIIDDWILMGFLVGNDFIPHLPHLHI 302
Query: 357 REGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQK--------R 408
A+ LL Y +GGY+ ++G + L R EK++ ++ ++ + F +
Sbjct: 303 NHDALPLLYGTYVTILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSEVFVDLKWFE 362
Query: 409 TRIQQAY-------------EYNEAMKLNARRES---------------SEELLQAPVAV 440
+++ Y Y E KL + S S++ L+
Sbjct: 363 SKVGNKYLNEAAGVAAEEARNYKEKKKLKGQENSLCWTALDKNEGEMITSKDNLEDETED 422
Query: 441 ADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWF 500
D + YK YY K + D D YV+ + W+ YYY V SW W+
Sbjct: 423 DDLFETEFRQYKRTYYMTKMGVDVVS--DDFLADQAACYVQAIQWILHYYYHGVQSWSWY 480
Query: 501 YPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSP 560
YPYHYAPF SD+ ++S L+I F LG+PF+PF+QL+ LPAAS + LP Y++LMT+ SP
Sbjct: 481 YPYHYAPFLSDIHNISTLKIHFELGKPFKPFEQLLAVLPAASKNLLPACYQHLMTNEDSP 540
Query: 561 IYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVM---- 616
I ++YPPDF+ D+NGK+ W+ VV +PFIDEK LL + L +EE RN
Sbjct: 541 IIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEERKRNQHSECLM 600
Query: 617 ------LDLLYVHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVNAS 657
+ +Y P + I C Y + AW +D+N +
Sbjct: 601 CWYDRDTEFIYPSPWPEKFPAIERCCTRYKIISLD---AWRVDINKN 644
>gi|383419337|gb|AFH32882.1| 5'-3' exoribonuclease 1 isoform a [Macaca mulatta]
Length = 1707
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 262/707 (37%), Positives = 376/707 (53%), Gaps = 113/707 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP FYRW+++RYP + +VV+E Q+ EFDNLYLDMNGII
Sbjct: 1 MGVPKFYRWISERYPC-LSEVVKEH-QIP------------------EFDNLYLDMNGII 40
Query: 61 HPCFHPDGKPAP--TSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C HP+ S D +F IF Y++ +F +++PRK+ ++A+DGVAPRAKMNQQR R
Sbjct: 41 HQCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RFR+AK+A E++++K E+ G+ L + + DSN ITPGT+FMA L L+YF
Sbjct: 101 RFRSAKEA------EDKIKKAIEK-GETLPTEAR---FDSNCITPGTEFMARLHEHLKYF 150
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
+ +++ WQ + S PGEGEHKIM +IR ++ P DPNTRHCLYGLDADLI
Sbjct: 151 VNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLI 210
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
ML L +HE HFS+LRE + G++ + VC ++T H
Sbjct: 211 MLGLTSHEAHFSLLREEVRFGGKKTQ-RVCAP----------------------EETTFH 247
Query: 299 KKKYQFLNIWVLREYLQYELDI--PNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEI 356
L++ ++REY+ YE + F + ERI+DD++ + F VGNDF+PH+P L I
Sbjct: 248 -----LLHLSLMREYIDYEFSVLKEKITFKYDIERIIDDWILMGFLVGNDFIPHLPHLHI 302
Query: 357 REGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQK--------R 408
A+ LL Y +GGY+ ++G + L R EK++ ++ ++ + F +
Sbjct: 303 NHDALPLLYGTYITILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSEVFVDLKWFE 362
Query: 409 TRIQQAY-------------EYNEAMKLNARRES---------------SEELLQAPVAV 440
+++ Y Y E KL + S S++ L+
Sbjct: 363 SKVGNKYLNEAAGVAAEEARNYKEKKKLKGQENSLCWAALDKNEGEMVTSKDNLEDETED 422
Query: 441 ADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWF 500
D + YK YY K + D D YV+ + W+ YYY V SW W+
Sbjct: 423 DDLFETEFRQYKRTYYMTKMGVDIVS--DDFLADQAACYVQAIQWILHYYYHGVQSWSWY 480
Query: 501 YPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSP 560
YPYHYAPF SD++++S L I F LG+PF+PF+QL+ LPAAS + LP Y++LMT SP
Sbjct: 481 YPYHYAPFLSDIRNISTLRIHFELGKPFKPFEQLLAVLPAASKNLLPTCYQHLMTSEDSP 540
Query: 561 IYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVM---- 616
I ++YPPDF+ D+NGK+ W+ VV +PFIDEK LL + L +EE RN
Sbjct: 541 IIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEERKRNQHSECLM 600
Query: 617 ------LDLLYVHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVNAS 657
+ +Y P + I C Y + AW +D+N +
Sbjct: 601 CWYDRDTEFVYPSPWPEKFPAIERCCTRYKIISLD---AWRVDINKN 644
>gi|402861338|ref|XP_003895054.1| PREDICTED: 5'-3' exoribonuclease 1 isoform 2 [Papio anubis]
Length = 1706
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 262/707 (37%), Positives = 376/707 (53%), Gaps = 113/707 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP FYRW+++RYP + +VV+E Q+ EFDNLYLDMNGII
Sbjct: 1 MGVPKFYRWISERYPC-LSEVVKEH-QIP------------------EFDNLYLDMNGII 40
Query: 61 HPCFHPDGKPAP--TSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C HP+ S D +F IF Y++ +F +++PRK+ ++A+DGVAPRAKMNQQR R
Sbjct: 41 HQCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RFR+AK+A E++++K E+ G+ L + + DSN ITPGT+FMA L L+YF
Sbjct: 101 RFRSAKEA------EDKIKKAIEK-GETLPTEAR---FDSNCITPGTEFMARLHEHLKYF 150
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
+ +++ WQ + S PGEGEHKIM +IR ++ P DPNTRHCLYGLDADLI
Sbjct: 151 VNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLI 210
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
ML L +HE HFS+LRE + G++ + VC ++T H
Sbjct: 211 MLGLTSHEAHFSLLREEVRFGGKKTQ-RVCAP----------------------EETTFH 247
Query: 299 KKKYQFLNIWVLREYLQYELDI--PNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEI 356
L++ ++REY+ YE + F + ERI+DD++ + F VGNDF+PH+P L I
Sbjct: 248 -----LLHLSLMREYIDYEFSVLKEKITFKYDIERIIDDWILMGFLVGNDFIPHLPHLHI 302
Query: 357 REGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQK--------R 408
A+ LL Y +GGY+ ++G + L R EK++ ++ ++ + F +
Sbjct: 303 NHDALPLLYGTYITILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSEVFVDLKWFE 362
Query: 409 TRIQQAY-------------EYNEAMKLNARRES---------------SEELLQAPVAV 440
+++ Y Y E KL + S S++ L+
Sbjct: 363 SKVGNKYLNEAAGVAAEEARNYKEKKKLKGQENSLCWAALDKNEGEMVTSKDNLEDETED 422
Query: 441 ADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWF 500
D + YK YY K + D D YV+ + W+ YYY V SW W+
Sbjct: 423 DDLFETEFRQYKRTYYMTKMGVDIVS--DDFLADQAACYVQAIQWILHYYYHGVQSWSWY 480
Query: 501 YPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSP 560
YPYHYAPF SD++++S L I F LG+PF+PF+QL+ LPAAS + LP Y++LMT SP
Sbjct: 481 YPYHYAPFLSDIRNISTLRIHFELGKPFKPFEQLLAVLPAASKNLLPTCYQHLMTSEDSP 540
Query: 561 IYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVM---- 616
I ++YPPDF+ D+NGK+ W+ VV +PFIDEK LL + L +EE RN
Sbjct: 541 IIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEERKRNQHSECLM 600
Query: 617 ------LDLLYVHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVNAS 657
+ +Y P + I C Y + AW +D+N +
Sbjct: 601 CWYDRDTEFVYPSPWPEKFPAIERCCTRYKIISLD---AWRVDINKN 644
>gi|383419335|gb|AFH32881.1| 5'-3' exoribonuclease 1 isoform b [Macaca mulatta]
Length = 1694
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 262/707 (37%), Positives = 376/707 (53%), Gaps = 113/707 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP FYRW+++RYP + +VV+E Q+ EFDNLYLDMNGII
Sbjct: 1 MGVPKFYRWISERYPC-LSEVVKEH-QIP------------------EFDNLYLDMNGII 40
Query: 61 HPCFHPDGKPAP--TSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C HP+ S D +F IF Y++ +F +++PRK+ ++A+DGVAPRAKMNQQR R
Sbjct: 41 HQCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RFR+AK+A E++++K E+ G+ L + + DSN ITPGT+FMA L L+YF
Sbjct: 101 RFRSAKEA------EDKIKKAIEK-GETLPTEAR---FDSNCITPGTEFMARLHEHLKYF 150
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
+ +++ WQ + S PGEGEHKIM +IR ++ P DPNTRHCLYGLDADLI
Sbjct: 151 VNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLI 210
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
ML L +HE HFS+LRE + G++ + VC ++T H
Sbjct: 211 MLGLTSHEAHFSLLREEVRFGGKKTQ-RVCAP----------------------EETTFH 247
Query: 299 KKKYQFLNIWVLREYLQYELDI--PNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEI 356
L++ ++REY+ YE + F + ERI+DD++ + F VGNDF+PH+P L I
Sbjct: 248 -----LLHLSLMREYIDYEFSVLKEKITFKYDIERIIDDWILMGFLVGNDFIPHLPHLHI 302
Query: 357 REGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQK--------R 408
A+ LL Y +GGY+ ++G + L R EK++ ++ ++ + F +
Sbjct: 303 NHDALPLLYGTYITILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSEVFVDLKWFE 362
Query: 409 TRIQQAY-------------EYNEAMKLNARRES---------------SEELLQAPVAV 440
+++ Y Y E KL + S S++ L+
Sbjct: 363 SKVGNKYLNEAAGVAAEEARNYKEKKKLKGQENSLCWAALDKNEGEMVTSKDNLEDETED 422
Query: 441 ADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWF 500
D + YK YY K + D D YV+ + W+ YYY V SW W+
Sbjct: 423 DDLFETEFRQYKRTYYMTKMGVDIVS--DDFLADQAACYVQAIQWILHYYYHGVQSWSWY 480
Query: 501 YPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSP 560
YPYHYAPF SD++++S L I F LG+PF+PF+QL+ LPAAS + LP Y++LMT SP
Sbjct: 481 YPYHYAPFLSDIRNISTLRIHFELGKPFKPFEQLLAVLPAASKNLLPTCYQHLMTSEDSP 540
Query: 561 IYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVM---- 616
I ++YPPDF+ D+NGK+ W+ VV +PFIDEK LL + L +EE RN
Sbjct: 541 IIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEERKRNQHSECLM 600
Query: 617 ------LDLLYVHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVNAS 657
+ +Y P + I C Y + AW +D+N +
Sbjct: 601 CWYDRDTEFVYPSPWPEKFPAIERCCTRYKIISLD---AWRVDINKN 644
>gi|109048976|ref|XP_001112305.1| PREDICTED: 5'-3' exoribonuclease 1-like isoform 2 [Macaca mulatta]
gi|355747003|gb|EHH51617.1| hypothetical protein EGM_11029 [Macaca fascicularis]
Length = 1706
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 262/707 (37%), Positives = 376/707 (53%), Gaps = 113/707 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP FYRW+++RYP + +VV+E Q+ EFDNLYLDMNGII
Sbjct: 1 MGVPKFYRWISERYPC-LSEVVKEH-QIP------------------EFDNLYLDMNGII 40
Query: 61 HPCFHPDGKPAP--TSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C HP+ S D +F IF Y++ +F +++PRK+ ++A+DGVAPRAKMNQQR R
Sbjct: 41 HQCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RFR+AK+A E++++K E+ G+ L + + DSN ITPGT+FMA L L+YF
Sbjct: 101 RFRSAKEA------EDKIKKAIEK-GETLPTEAR---FDSNCITPGTEFMARLHEHLKYF 150
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
+ +++ WQ + S PGEGEHKIM +IR ++ P DPNTRHCLYGLDADLI
Sbjct: 151 VNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLI 210
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
ML L +HE HFS+LRE + G++ + VC ++T H
Sbjct: 211 MLGLTSHEAHFSLLREEVRFGGKKTQ-RVCAP----------------------EETTFH 247
Query: 299 KKKYQFLNIWVLREYLQYELDI--PNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEI 356
L++ ++REY+ YE + F + ERI+DD++ + F VGNDF+PH+P L I
Sbjct: 248 -----LLHLSLMREYIDYEFSVLKEKITFKYDIERIIDDWILMGFLVGNDFIPHLPHLHI 302
Query: 357 REGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQK--------R 408
A+ LL Y +GGY+ ++G + L R EK++ ++ ++ + F +
Sbjct: 303 NHDALPLLYGTYITILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSEVFVDLKWFE 362
Query: 409 TRIQQAY-------------EYNEAMKLNARRES---------------SEELLQAPVAV 440
+++ Y Y E KL + S S++ L+
Sbjct: 363 SKVGNKYLNEAAGVAAEEARNYKEKKKLKGQENSLCWAALDKNEGEMVTSKDNLEDETED 422
Query: 441 ADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWF 500
D + YK YY K + D D YV+ + W+ YYY V SW W+
Sbjct: 423 DDLFETEFRQYKRTYYMTKMGVDIVS--DDFLADQAACYVQAIQWILHYYYHGVQSWSWY 480
Query: 501 YPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSP 560
YPYHYAPF SD++++S L I F LG+PF+PF+QL+ LPAAS + LP Y++LMT SP
Sbjct: 481 YPYHYAPFLSDIRNISTLRIHFELGKPFKPFEQLLAVLPAASKNLLPTCYQHLMTSEDSP 540
Query: 561 IYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVM---- 616
I ++YPPDF+ D+NGK+ W+ VV +PFIDEK LL + L +EE RN
Sbjct: 541 IIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEERKRNQHSECLM 600
Query: 617 ------LDLLYVHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVNAS 657
+ +Y P + I C Y + AW +D+N +
Sbjct: 601 CWYDRDTEFVYPSPWPEKFPAIERCCTRYKIISLD---AWRVDINKN 644
>gi|402861336|ref|XP_003895053.1| PREDICTED: 5'-3' exoribonuclease 1 isoform 1 [Papio anubis]
Length = 1694
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 262/707 (37%), Positives = 376/707 (53%), Gaps = 113/707 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP FYRW+++RYP + +VV+E Q+ EFDNLYLDMNGII
Sbjct: 1 MGVPKFYRWISERYPC-LSEVVKEH-QIP------------------EFDNLYLDMNGII 40
Query: 61 HPCFHPDGKPAP--TSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C HP+ S D +F IF Y++ +F +++PRK+ ++A+DGVAPRAKMNQQR R
Sbjct: 41 HQCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RFR+AK+A E++++K E+ G+ L + + DSN ITPGT+FMA L L+YF
Sbjct: 101 RFRSAKEA------EDKIKKAIEK-GETLPTEAR---FDSNCITPGTEFMARLHEHLKYF 150
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
+ +++ WQ + S PGEGEHKIM +IR ++ P DPNTRHCLYGLDADLI
Sbjct: 151 VNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLI 210
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
ML L +HE HFS+LRE + G++ + VC ++T H
Sbjct: 211 MLGLTSHEAHFSLLREEVRFGGKKTQ-RVCAP----------------------EETTFH 247
Query: 299 KKKYQFLNIWVLREYLQYELDI--PNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEI 356
L++ ++REY+ YE + F + ERI+DD++ + F VGNDF+PH+P L I
Sbjct: 248 -----LLHLSLMREYIDYEFSVLKEKITFKYDIERIIDDWILMGFLVGNDFIPHLPHLHI 302
Query: 357 REGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQK--------R 408
A+ LL Y +GGY+ ++G + L R EK++ ++ ++ + F +
Sbjct: 303 NHDALPLLYGTYITILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSEVFVDLKWFE 362
Query: 409 TRIQQAY-------------EYNEAMKLNARRES---------------SEELLQAPVAV 440
+++ Y Y E KL + S S++ L+
Sbjct: 363 SKVGNKYLNEAAGVAAEEARNYKEKKKLKGQENSLCWAALDKNEGEMVTSKDNLEDETED 422
Query: 441 ADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWF 500
D + YK YY K + D D YV+ + W+ YYY V SW W+
Sbjct: 423 DDLFETEFRQYKRTYYMTKMGVDIVS--DDFLADQAACYVQAIQWILHYYYHGVQSWSWY 480
Query: 501 YPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSP 560
YPYHYAPF SD++++S L I F LG+PF+PF+QL+ LPAAS + LP Y++LMT SP
Sbjct: 481 YPYHYAPFLSDIRNISTLRIHFELGKPFKPFEQLLAVLPAASKNLLPTCYQHLMTSEDSP 540
Query: 561 IYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVM---- 616
I ++YPPDF+ D+NGK+ W+ VV +PFIDEK LL + L +EE RN
Sbjct: 541 IIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEERKRNQHSECLM 600
Query: 617 ------LDLLYVHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVNAS 657
+ +Y P + I C Y + AW +D+N +
Sbjct: 601 CWYDRDTEFVYPSPWPEKFPAIERCCTRYKIISLD---AWRVDINKN 644
>gi|297286724|ref|XP_001112265.2| PREDICTED: 5'-3' exoribonuclease 1-like isoform 1 [Macaca mulatta]
Length = 1693
Score = 444 bits (1141), Expect = e-122, Method: Compositional matrix adjust.
Identities = 262/707 (37%), Positives = 376/707 (53%), Gaps = 113/707 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP FYRW+++RYP + +VV+E Q+ EFDNLYLDMNGII
Sbjct: 1 MGVPKFYRWISERYPC-LSEVVKEH-QIP------------------EFDNLYLDMNGII 40
Query: 61 HPCFHPDGKPAP--TSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C HP+ S D +F IF Y++ +F +++PRK+ ++A+DGVAPRAKMNQQR R
Sbjct: 41 HQCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RFR+AK+A E++++K E+ G+ L + + DSN ITPGT+FMA L L+YF
Sbjct: 101 RFRSAKEA------EDKIKKAIEK-GETLPTEAR---FDSNCITPGTEFMARLHEHLKYF 150
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
+ +++ WQ + S PGEGEHKIM +IR ++ P DPNTRHCLYGLDADLI
Sbjct: 151 VNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLI 210
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
ML L +HE HFS+LRE + G++ + VC ++T H
Sbjct: 211 MLGLTSHEAHFSLLREEVRFGGKKTQ-RVCAP----------------------EETTFH 247
Query: 299 KKKYQFLNIWVLREYLQYELDI--PNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEI 356
L++ ++REY+ YE + F + ERI+DD++ + F VGNDF+PH+P L I
Sbjct: 248 -----LLHLSLMREYIDYEFSVLKEKITFKYDIERIIDDWILMGFLVGNDFIPHLPHLHI 302
Query: 357 REGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQK--------R 408
A+ LL Y +GGY+ ++G + L R EK++ ++ ++ + F +
Sbjct: 303 NHDALPLLYGTYITILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSEVFVDLKWFE 362
Query: 409 TRIQQAY-------------EYNEAMKLNARRES---------------SEELLQAPVAV 440
+++ Y Y E KL + S S++ L+
Sbjct: 363 SKVGNKYLNEAAGVAAEEARNYKEKKKLKGQENSLCWAALDKNEGEMVTSKDNLEDETED 422
Query: 441 ADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWF 500
D + YK YY K + D D YV+ + W+ YYY V SW W+
Sbjct: 423 DDLFETEFRQYKRTYYMTKMGVDIVS--DDFLADQAACYVQAIQWILHYYYHGVQSWSWY 480
Query: 501 YPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSP 560
YPYHYAPF SD++++S L I F LG+PF+PF+QL+ LPAAS + LP Y++LMT SP
Sbjct: 481 YPYHYAPFLSDIRNISTLRIHFELGKPFKPFEQLLAVLPAASKNLLPTCYQHLMTSEDSP 540
Query: 561 IYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVM---- 616
I ++YPPDF+ D+NGK+ W+ VV +PFIDEK LL + L +EE RN
Sbjct: 541 IIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEERKRNQHSECLM 600
Query: 617 ------LDLLYVHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVNAS 657
+ +Y P + I C Y + AW +D+N +
Sbjct: 601 CWYDRDTEFVYPSPWPEKFPAIERCCTRYKIISLD---AWRVDINKN 644
>gi|51476722|emb|CAH18332.1| hypothetical protein [Homo sapiens]
Length = 1694
Score = 444 bits (1141), Expect = e-122, Method: Compositional matrix adjust.
Identities = 262/707 (37%), Positives = 376/707 (53%), Gaps = 113/707 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP FYRW+++RYP + +VV+E Q+ EFDNLYLDMNGII
Sbjct: 1 MGVPKFYRWISERYPC-LSEVVKEH-QIP------------------EFDNLYLDMNGII 40
Query: 61 HPCFHPDGKPAP--TSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C HP+ S D +F IF Y++ +F +++PRK+ ++A+DGVAPRAKMNQQR R
Sbjct: 41 HQCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RFR+AK+A E+++ K E+ G+ L + + DSN ITPGT+FMA L L+YF
Sbjct: 101 RFRSAKEA------EDKIEKAIEK-GETLPTEAR---FDSNCITPGTEFMARLHEHLEYF 150
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
+ +++ WQ + S PGEGEHKIM +IR ++ P DPNTRHCLYGLDADLI
Sbjct: 151 VNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLI 210
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
ML L +HE HFS+LRE + G++ + VC ++T H
Sbjct: 211 MLGLTSHEAHFSLLREEVRFGGKKTQ-RVCAP----------------------EETTFH 247
Query: 299 KKKYQFLNIWVLREYLQYELDI--PNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEI 356
L++ ++REY+ YE + F + ERI+DD++ + F VGNDF+PH+P L I
Sbjct: 248 -----LLHLSLMREYIDYEFSVLKEKITFKYDIERIIDDWILMGFLVGNDFIPHLPHLHI 302
Query: 357 REGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQK--------R 408
A+ LL Y +GGY+ ++G + L R EK++ ++ ++ + F +
Sbjct: 303 NHDALPLLYGTYVTILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSEVFVDLKWFE 362
Query: 409 TRIQQAY-------------EYNEAMKLNARRES---------------SEELLQAPVAV 440
+++ Y Y E KL + S S++ L+
Sbjct: 363 SKVGNKYLNEAAGVAAEEARNYKEKKKLKGQENSLCWTALDKNEGEMITSKDNLEDETED 422
Query: 441 ADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWF 500
D + YK YY K + D D YV+ + W+ YYY V SW W+
Sbjct: 423 DDLFETEFRQYKRTYYMTKMGVDVVS--DDFLADQAACYVQAIQWILHYYYHGVQSWSWY 480
Query: 501 YPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSP 560
YPYHYAPF SD+ ++S L+I F LG+PF+PF+QL+ LPAAS + LP Y++LMT+ SP
Sbjct: 481 YPYHYAPFLSDIHNISTLKIHFELGKPFKPFEQLLAVLPAASKNLLPACYQHLMTNEDSP 540
Query: 561 IYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVM---- 616
I ++YPPDF+ D+NGK+ W+ VV +PFIDEK LL + L +EE RN
Sbjct: 541 IIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEERKRNQHSECLM 600
Query: 617 ------LDLLYVHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVNAS 657
+ +Y P + I C Y + AW +D+N +
Sbjct: 601 CWYDRDTEFIYPSPWPEKFPAIERCCTRYKIISLD---AWRVDINKN 644
>gi|380813908|gb|AFE78828.1| 5'-3' exoribonuclease 1 isoform a [Macaca mulatta]
Length = 1707
Score = 444 bits (1141), Expect = e-121, Method: Compositional matrix adjust.
Identities = 262/707 (37%), Positives = 376/707 (53%), Gaps = 113/707 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP FYRW+++RYP + +VV+E Q+ EFDNLYLDMNGII
Sbjct: 1 MGVPKFYRWISERYPC-LSEVVKEH-QIP------------------EFDNLYLDMNGII 40
Query: 61 HPCFHPDGKPAP--TSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C HP+ S D +F IF Y++ +F +++PRK+ ++A+DGVAPRAKMNQQR R
Sbjct: 41 HQCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RFR+AK+A E++++K E+ G+ L + + DSN ITPGT+FMA L L+YF
Sbjct: 101 RFRSAKEA------EDKIKKAIEK-GETLPTEAR---FDSNCITPGTEFMARLHEHLKYF 150
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
+ +++ WQ + S PGEGEHKIM +IR ++ P DPNTRHCLYGLDADLI
Sbjct: 151 VNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLI 210
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
ML L +HE HFS+LRE + G++ + VC ++T H
Sbjct: 211 MLGLTSHEAHFSLLREEVRYGGKKTQ-RVCAP----------------------EETTFH 247
Query: 299 KKKYQFLNIWVLREYLQYELDI--PNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEI 356
L++ ++REY+ YE + F + ERI+DD++ + F VGNDF+PH+P L I
Sbjct: 248 -----LLHLSLMREYIDYEFSVLKEKITFKYDIERIIDDWILMGFLVGNDFIPHLPHLHI 302
Query: 357 REGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQK--------R 408
A+ LL Y +GGY+ ++G + L R EK++ ++ ++ + F +
Sbjct: 303 NHDALPLLYGTYITILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSEVFVDLKWFE 362
Query: 409 TRIQQAY-------------EYNEAMKLNARRES---------------SEELLQAPVAV 440
+++ Y Y E KL + S S++ L+
Sbjct: 363 SKVGNKYLNEAAGVAAEEARNYKEKKKLKGQENSLCWAALDKNEGEMVTSKDNLEDETED 422
Query: 441 ADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWF 500
D + YK YY K + D D YV+ + W+ YYY V SW W+
Sbjct: 423 DDLFETEFRQYKRTYYMTKMGVDIVS--DDFLADQAACYVQAIQWILHYYYHGVQSWSWY 480
Query: 501 YPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSP 560
YPYHYAPF SD++++S L I F LG+PF+PF+QL+ LPAAS + LP Y++LMT SP
Sbjct: 481 YPYHYAPFLSDIRNISTLRIHFELGKPFKPFEQLLAVLPAASKNLLPTCYQHLMTSEDSP 540
Query: 561 IYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVM---- 616
I ++YPPDF+ D+NGK+ W+ VV +PFIDEK LL + L +EE RN
Sbjct: 541 IIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEERKRNQHSECLM 600
Query: 617 ------LDLLYVHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVNAS 657
+ +Y P + I C Y + AW +D+N +
Sbjct: 601 CWYDRDTEFVYPSPWPEKFPAIERCCTRYKIISLD---AWRVDINKN 644
>gi|296227920|ref|XP_002759573.1| PREDICTED: 5'-3' exoribonuclease 1 isoform 2 [Callithrix jacchus]
Length = 1706
Score = 444 bits (1141), Expect = e-121, Method: Compositional matrix adjust.
Identities = 253/653 (38%), Positives = 360/653 (55%), Gaps = 100/653 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP FYRW+++RYP + +VV+E Q+ EFDNLYLDMNGII
Sbjct: 1 MGVPKFYRWISERYPC-LSEVVKEH-QIP------------------EFDNLYLDMNGII 40
Query: 61 HPCFHPDGKPAP--TSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C HP+ S D +F IF Y++ +F +++PRK+ ++A+DGVAPRAKMNQQR R
Sbjct: 41 HQCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RFR+AK+A E++++K E+ G+ L + + DSN ITPGT+FMA L L+YF
Sbjct: 101 RFRSAKEA------EDKIKKAIEK-GETLPTEAR---FDSNCITPGTEFMARLHEHLKYF 150
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
+ +++ WQ + S PGEGEHKIM +IR ++ P DPNTRHCLYGLDADLI
Sbjct: 151 VNMKISMDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLI 210
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
ML L +HE HFS+LRE + G++ + VC ++T H
Sbjct: 211 MLGLTSHEAHFSLLREEVRFGGKKAQ-RVCAP----------------------EETTFH 247
Query: 299 KKKYQFLNIWVLREYLQYELDI--PNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEI 356
L++ ++REY+ YE + F + ERI+DD++ + F VGNDF+PH+P L I
Sbjct: 248 -----LLHLSLMREYIDYEFSVLKEKITFKYDIERIIDDWILMGFLVGNDFIPHLPHLHI 302
Query: 357 REGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQK--------R 408
A+ LL Y +GGY+ ++G + L R EK++ ++ ++ + F +
Sbjct: 303 NHDALPLLYGTYITILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSEVFVDLKWFE 362
Query: 409 TRIQQAY-------------EYNEAMKLNARRES---------------SEELLQAPVAV 440
+++ Y Y E KL + S S++ L+
Sbjct: 363 SKVGNKYLNEAAGVAAEEARNYKENKKLKGQENSLCWAALDKNEGEMVTSKDNLEDETED 422
Query: 441 ADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWF 500
D + YK YY K + D D YV+ + W+ YYY V SW W+
Sbjct: 423 DDLFETEFRQYKRTYYMTKMGVDVVS--DDFLADQATCYVQAIQWILHYYYHGVQSWSWY 480
Query: 501 YPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSP 560
YPYHYAPF SD++++S L I F LG+PF+PF+QL+ LPAAS + LP Y++LMT SP
Sbjct: 481 YPYHYAPFLSDIRNISTLRIHFELGKPFKPFEQLLAVLPAASKNLLPTCYQHLMTSEDSP 540
Query: 561 IYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRN 613
I ++YPPDF+ D+NGK+ W+ VV +PFIDEK LL + L +EE RN
Sbjct: 541 IIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEERKRN 593
>gi|308503096|ref|XP_003113732.1| CRE-XRN-2 protein [Caenorhabditis remanei]
gi|308263691|gb|EFP07644.1| CRE-XRN-2 protein [Caenorhabditis remanei]
Length = 988
Score = 444 bits (1141), Expect = e-121, Method: Compositional matrix adjust.
Identities = 227/424 (53%), Positives = 290/424 (68%), Gaps = 6/424 (1%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPAF+RWL +YP ++V+ ED Q D +G PVD ++PNPN EFDNLYLDMNGII
Sbjct: 1 MGVPAFFRWLTKKYPATVVNA-NEDRQRDADGKRVPVDCTQPNPNFQEFDNLYLDMNGII 59
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ +P P + D++F IF+YID I+ +VRPR+LLY+AIDGVAPRAKMNQQR+RRF
Sbjct: 60 HPCTHPEDRPPPKNEDEMFALIFEYIDRIYSIVRPRRLLYMAIDGVAPRAKMNQQRSRRF 119
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPET-CDSNVITPGTQFMAVLSAALQYFI 179
RA+K+ AE A E R G + +K E DSN ITPGT FMA L+ AL+Y+I
Sbjct: 120 RASKEMAEKAASIEEQRNRLMAEGIAVPPPKKEEAHFDSNCITPGTPFMARLADALRYYI 179
Query: 180 QARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIM 239
R+ W ++ILSDANVPGEGEHKIM YIR QR P DPNT HCL G DADLIM
Sbjct: 180 HDRVTNDASWANIEIILSDANVPGEGEHKIMDYIRKQRGNPAHDPNTVHCLCGADADLIM 239
Query: 240 LSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIHK 299
L +ATHE +F+I+RE +P Q C +CGQ GH EC G +N D P +
Sbjct: 240 LGIATHEANFNIIREEF-VPNQPRACELCGQYGHELKECRG--AENDTDLGDDYCKPEQR 296
Query: 300 KK-YQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIRE 358
+K + FL I VLREYL+ E+ +PN PF + ER +DD+VFLCFFVGNDFLPH+P+LEIRE
Sbjct: 297 EKNFIFLRIPVLREYLEKEMAMPNLPFKFDLERALDDWVFLCFFVGNDFLPHLPSLEIRE 356
Query: 359 GAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYEYN 418
GAI+ L+ +Y+ M GYLT G LDRVE ++ + ED+IF++R + ++ ++ N
Sbjct: 357 GAIDRLIKLYKEMVYEMRGYLTKDGIPELDRVEMIMKGLGKVEDEIFKRRQQDEERFKEN 416
Query: 419 EAMK 422
+ K
Sbjct: 417 QKNK 420
Score = 180 bits (456), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 93/220 (42%), Positives = 134/220 (60%), Gaps = 13/220 (5%)
Query: 425 ARRESSEELLQAPVAV-------ADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVL 477
A RES + + P+ V D ++L E G+K+RYY KF++ + +++D + V
Sbjct: 509 AARESRKRKAEEPLVVPEEDEEPKDDIRLFESGWKDRYYRAKFDVGS-DDVD-FRHRVAW 566
Query: 478 KYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDLEITFFL-GEPFRPFDQLMG 536
YVEGLCWV RYYYQ SW W++PYHYAPFASD + + + + F +PF P +QLM
Sbjct: 567 AYVEGLCWVLRYYYQGCSSWDWYFPYHYAPFASDFETVGEFKPDFTKPTKPFNPLEQLMS 626
Query: 537 TLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLR 596
PAAS LP +++ LM + SPI YP DF+ID+NGK++AWQGV LPF+DE+ LL
Sbjct: 627 VFPAASKQHLPVEWQKLMIEDDSPIIDLYPADFRIDLNGKKYAWQGVALLPFVDEQRLLA 686
Query: 597 QTKKLEVFLTEEELFRNSVMLDLLYV---HPQHPLYQQIT 633
K + LT+EE RN+ + +++ H +QQ+
Sbjct: 687 TLKSVYPTLTDEEKQRNTRGPNRIFIGRNHKSFAFFQQVA 726
>gi|225681905|gb|EEH20189.1| 5'-3' exoribonuclease [Paracoccidioides brasiliensis Pb03]
Length = 1044
Score = 443 bits (1140), Expect = e-121, Method: Compositional matrix adjust.
Identities = 223/427 (52%), Positives = 293/427 (68%), Gaps = 14/427 (3%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQ-VDGEGVARPVDVSKPNPNGMEFDNLYLDMNGI 59
MGVPA +RWL+ +YP I VVEE PQ ++G+ V PVD +KPNPNG E DNLYLDMNGI
Sbjct: 1 MGVPALFRWLSSKYPKIISSVVEELPQEINGQEV--PVDTTKPNPNGEEMDNLYLDMNGI 58
Query: 60 IHPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRR 119
+HPC HP+GKP P++ +++ IF Y D + +VRPRKLL +A+DGVAPRAKMNQQR+RR
Sbjct: 59 VHPCTHPEGKPPPSNEEEMMLEIFKYTDRVVNMVRPRKLLMIAVDGVAPRAKMNQQRSRR 118
Query: 120 FRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPE-----TCDSNVITPGTQFMAVLSAA 174
FR+A++A EA+ ++ K + S +E E T DSNVITPGT FM +L+AA
Sbjct: 119 FRSAQEAKEADEKKVEFAKLLRKQNGKKSCEEIVEEVTMKTWDSNVITPGTPFMDILAAA 178
Query: 175 LQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLD 234
L+Y++ +LN P W+ KVI+SDA VPGEGEHKIM +IR QR+ P DPNTRH +YGLD
Sbjct: 179 LRYWVAYKLNTDPAWEKLKVIISDATVPGEGEHKIMEFIRSQRSCPEHDPNTRHVIYGLD 238
Query: 235 ADLIMLSLATHEIHFSILRE-VITLPGQQEKCFVCGQVGHLAAECHG--KPGDNPADWNG 291
ADLIML LATHE HF +LRE V + C +CGQ GH+A C G K + D G
Sbjct: 239 ADLIMLGLATHEPHFRVLREDVFFQESKGRTCHLCGQTGHIAEACKGTAKEKNGEFDEKG 298
Query: 292 VDDTPIHKKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHM 351
+ K + +L++ VLREYL E+ +P PFP + ER +DD+VF+CFFVGNDFLPH+
Sbjct: 299 KGSS---LKPFIWLHVSVLREYLAVEMHVPQQPFPFDLERALDDWVFMCFFVGNDFLPHL 355
Query: 352 PTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRI 411
P+L+IRE I+ L+ ++R AMGGYLT G V L+R + +Q +A ED IF++R +
Sbjct: 356 PSLDIRENGIDTLIAIWRDNIPAMGGYLTKDGHVDLNRAQLILQGLAKQEDAIFRRRRQT 415
Query: 412 QQAYEYN 418
++ N
Sbjct: 416 EERKNAN 422
Score = 212 bits (539), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 111/229 (48%), Positives = 147/229 (64%), Gaps = 9/229 (3%)
Query: 442 DTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFY 501
DTV+L E GY +RYY KF++ +P++I+ + V YVEGL WV YY+Q SW W+Y
Sbjct: 570 DTVRLWEEGYADRYYEQKFQV-HPKDIE-FRHKVARAYVEGLAWVLLYYFQGCPSWTWYY 627
Query: 502 PYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPI 561
PYHYAPFA+D L + I F G PF+PF+QLMG LPAAS+ A+PE + +LM+DP+S I
Sbjct: 628 PYHYAPFAADFVGLGKMNIEFNRGAPFKPFEQLMGVLPAASNHAIPEVFHDLMSDPNSEI 687
Query: 562 YKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLY 621
FYP +F ID+NGK+FAWQGV LPFIDEK LL +K L+ EE RNS D+L
Sbjct: 688 IDFYPEEFPIDLNGKKFAWQGVALLPFIDEKRLLVAMEKRYHLLSSEEHARNSTGRDVLL 747
Query: 622 VHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVNASGGMNGYIWLCERN 670
V +HPLY +T Y + Q ++++ S G+ G + ERN
Sbjct: 748 VSDRHPLYDNLT--ANFYSK--KQGLSKLKLNMRVSEGLGGKV---ERN 789
>gi|296227918|ref|XP_002759572.1| PREDICTED: 5'-3' exoribonuclease 1 isoform 1 [Callithrix jacchus]
Length = 1694
Score = 443 bits (1140), Expect = e-121, Method: Compositional matrix adjust.
Identities = 253/653 (38%), Positives = 360/653 (55%), Gaps = 100/653 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP FYRW+++RYP + +VV+E Q+ EFDNLYLDMNGII
Sbjct: 1 MGVPKFYRWISERYPC-LSEVVKEH-QIP------------------EFDNLYLDMNGII 40
Query: 61 HPCFHPDGKPAP--TSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C HP+ S D +F IF Y++ +F +++PRK+ ++A+DGVAPRAKMNQQR R
Sbjct: 41 HQCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RFR+AK+A E++++K E+ G+ L + + DSN ITPGT+FMA L L+YF
Sbjct: 101 RFRSAKEA------EDKIKKAIEK-GETLPTEAR---FDSNCITPGTEFMARLHEHLKYF 150
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
+ +++ WQ + S PGEGEHKIM +IR ++ P DPNTRHCLYGLDADLI
Sbjct: 151 VNMKISMDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLI 210
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
ML L +HE HFS+LRE + G++ + VC ++T H
Sbjct: 211 MLGLTSHEAHFSLLREEVRFGGKKAQ-RVCAP----------------------EETTFH 247
Query: 299 KKKYQFLNIWVLREYLQYELDI--PNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEI 356
L++ ++REY+ YE + F + ERI+DD++ + F VGNDF+PH+P L I
Sbjct: 248 -----LLHLSLMREYIDYEFSVLKEKITFKYDIERIIDDWILMGFLVGNDFIPHLPHLHI 302
Query: 357 REGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQK--------R 408
A+ LL Y +GGY+ ++G + L R EK++ ++ ++ + F +
Sbjct: 303 NHDALPLLYGTYITILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSEVFVDLKWFE 362
Query: 409 TRIQQAY-------------EYNEAMKLNARRES---------------SEELLQAPVAV 440
+++ Y Y E KL + S S++ L+
Sbjct: 363 SKVGNKYLNEAAGVAAEEARNYKENKKLKGQENSLCWAALDKNEGEMVTSKDNLEDETED 422
Query: 441 ADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWF 500
D + YK YY K + D D YV+ + W+ YYY V SW W+
Sbjct: 423 DDLFETEFRQYKRTYYMTKMGVDVVS--DDFLADQATCYVQAIQWILHYYYHGVQSWSWY 480
Query: 501 YPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSP 560
YPYHYAPF SD++++S L I F LG+PF+PF+QL+ LPAAS + LP Y++LMT SP
Sbjct: 481 YPYHYAPFLSDIRNISTLRIHFELGKPFKPFEQLLAVLPAASKNLLPTCYQHLMTSEDSP 540
Query: 561 IYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRN 613
I ++YPPDF+ D+NGK+ W+ VV +PFIDEK LL + L +EE RN
Sbjct: 541 IIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEERKRN 593
>gi|380813906|gb|AFE78827.1| 5'-3' exoribonuclease 1 isoform b [Macaca mulatta]
Length = 1694
Score = 443 bits (1140), Expect = e-121, Method: Compositional matrix adjust.
Identities = 262/707 (37%), Positives = 376/707 (53%), Gaps = 113/707 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP FYRW+++RYP + +VV+E Q+ EFDNLYLDMNGII
Sbjct: 1 MGVPKFYRWISERYPC-LSEVVKEH-QIP------------------EFDNLYLDMNGII 40
Query: 61 HPCFHPDGKPAP--TSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C HP+ S D +F IF Y++ +F +++PRK+ ++A+DGVAPRAKMNQQR R
Sbjct: 41 HQCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RFR+AK+A E++++K E+ G+ L + + DSN ITPGT+FMA L L+YF
Sbjct: 101 RFRSAKEA------EDKIKKAIEK-GETLPTEAR---FDSNCITPGTEFMARLHEHLKYF 150
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
+ +++ WQ + S PGEGEHKIM +IR ++ P DPNTRHCLYGLDADLI
Sbjct: 151 VNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLI 210
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
ML L +HE HFS+LRE + G++ + VC ++T H
Sbjct: 211 MLGLTSHEAHFSLLREEVRYGGKKTQ-RVCAP----------------------EETTFH 247
Query: 299 KKKYQFLNIWVLREYLQYELDI--PNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEI 356
L++ ++REY+ YE + F + ERI+DD++ + F VGNDF+PH+P L I
Sbjct: 248 -----LLHLSLMREYIDYEFSVLKEKITFKYDIERIIDDWILMGFLVGNDFIPHLPHLHI 302
Query: 357 REGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQK--------R 408
A+ LL Y +GGY+ ++G + L R EK++ ++ ++ + F +
Sbjct: 303 NHDALPLLYGTYITILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSEVFVDLKWFE 362
Query: 409 TRIQQAY-------------EYNEAMKLNARRES---------------SEELLQAPVAV 440
+++ Y Y E KL + S S++ L+
Sbjct: 363 SKVGNKYLNEAAGVAAEEARNYKEKKKLKGQENSLCWAALDKNEGEMVTSKDNLEDETED 422
Query: 441 ADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWF 500
D + YK YY K + D D YV+ + W+ YYY V SW W+
Sbjct: 423 DDLFETEFRQYKRTYYMTKMGVDIVS--DDFLADQAACYVQAIQWILHYYYHGVQSWSWY 480
Query: 501 YPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSP 560
YPYHYAPF SD++++S L I F LG+PF+PF+QL+ LPAAS + LP Y++LMT SP
Sbjct: 481 YPYHYAPFLSDIRNISTLRIHFELGKPFKPFEQLLAVLPAASKNLLPTCYQHLMTSEDSP 540
Query: 561 IYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVM---- 616
I ++YPPDF+ D+NGK+ W+ VV +PFIDEK LL + L +EE RN
Sbjct: 541 IIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEERKRNQHSECLM 600
Query: 617 ------LDLLYVHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVNAS 657
+ +Y P + I C Y + AW +D+N +
Sbjct: 601 CWYDRDTEFVYPSPWPEKFPAIERCCTRYKIISLD---AWRVDINKN 644
>gi|426342416|ref|XP_004037841.1| PREDICTED: 5'-3' exoribonuclease 1-like [Gorilla gorilla gorilla]
Length = 1432
Score = 443 bits (1140), Expect = e-121, Method: Compositional matrix adjust.
Identities = 262/707 (37%), Positives = 377/707 (53%), Gaps = 113/707 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP FYRW+++RYP + +VV+E Q+ EFDNLYLDMNGII
Sbjct: 1 MGVPKFYRWISERYPC-LSEVVKEH-QIP------------------EFDNLYLDMNGII 40
Query: 61 HPCFHPDGKPAP--TSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C HP+ S D +F IF Y++ +F +++PRK+ ++A+DGVAPRAKMNQQR R
Sbjct: 41 HQCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RFR+AK+A E++++K E+ G+ L + + DSN ITPGT+FMA L L+YF
Sbjct: 101 RFRSAKEA------EDKMKKAIEK-GETLPTEAR---FDSNCITPGTEFMARLHEHLKYF 150
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
+ +++ WQ + S PGEGEHKIM +IR ++ P DPNTRHCLYGLDADLI
Sbjct: 151 VNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLI 210
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
ML L +HE HFS+LRE + G++ + VC ++T H
Sbjct: 211 MLGLTSHEAHFSLLREEVRFGGKKTQ-RVCAP----------------------EETTFH 247
Query: 299 KKKYQFLNIWVLREYLQYELDI--PNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEI 356
L++ ++REY+ YE F + ERI+DD++ + F VGNDF+PH+P L I
Sbjct: 248 -----LLHLSLMREYIDYEFSALKEKITFKYDIERIIDDWILMGFLVGNDFIPHLPHLHI 302
Query: 357 REGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQK--------R 408
A+ LL Y +GGY+ ++G + L R EK++ ++ ++ + F +
Sbjct: 303 NHDALPLLYGTYVTILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSEVFVDLKWFE 362
Query: 409 TRIQQAY-------------EYNEAMKLNARRES---------------SEELLQAPVAV 440
+++ Y Y E KL + S S++ L+
Sbjct: 363 SKVGNKYLNEAAGVAAEEARNYKEKKKLKGQENSLCWAALDKNEGEMITSKDNLEDETED 422
Query: 441 ADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWF 500
D + YK YY K + D D YV+ + W+ YYY V SW W+
Sbjct: 423 DDLFETEFRQYKRTYYMTKMGVDVVS--DDFLADQAACYVQAIQWILHYYYHGVQSWSWY 480
Query: 501 YPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSP 560
YPYHYAPF SD++++S L+I F LG+PF+PF+QL+ LPAAS + LP Y++LMT+ SP
Sbjct: 481 YPYHYAPFLSDIQNISTLKIHFELGKPFKPFEQLLAVLPAASKNLLPACYQHLMTNEDSP 540
Query: 561 IYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVM---- 616
I ++YPPDF+ D+NGK+ W+ VV +PFIDEK LL + L +EE RN
Sbjct: 541 IIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEERKRNQHSECLM 600
Query: 617 ------LDLLYVHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVNAS 657
+ +Y P + I C Y + AW +D+N +
Sbjct: 601 CWYDRDTEFIYPSPWPEKFPAIERCCTRYKIISLD---AWRVDINKN 644
>gi|320163497|gb|EFW40396.1| 5'-3' exoribonuclease 2 [Capsaspora owczarzaki ATCC 30864]
Length = 1196
Score = 443 bits (1139), Expect = e-121, Method: Compositional matrix adjust.
Identities = 227/453 (50%), Positives = 303/453 (66%), Gaps = 13/453 (2%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPA +R+L++++P +V E P G P+D S+PNPN EFDNLYLDMNG+I
Sbjct: 1 MGVPAMFRYLSNKFP-KLVTPCAETPSTVINGTKVPIDTSRPNPNQQEFDNLYLDMNGLI 59
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP +P P S D++ IF+YI+ IF +VRPRKL+Y+AIDGVAPRAKMNQQR+RRF
Sbjct: 60 HPCCHPIDRPPPASEDEMMVLIFEYIERIFAIVRPRKLVYMAIDGVAPRAKMNQQRSRRF 119
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQ 180
RA ++AAE+ + LR + E G L K K DSN ITPGT+FM L+ L+YFI
Sbjct: 120 RAVREAAESATKLAELRAKLEADGVRLPQK-KGHKFDSNCITPGTEFMEQLAVCLRYFIH 178
Query: 181 ARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
+L + PGWQ KVILSDANVPGEGEHKIM YIR QR P +DPN +H +YG DADLIML
Sbjct: 179 RKLMEDPGWQNIKVILSDANVPGEGEHKIMDYIRHQRAHPEYDPNIKHVMYGADADLIML 238
Query: 241 SLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIHK- 299
LATHEI F+I+RE +P + C +C Q+GH + EC G+ + V+ P
Sbjct: 239 GLATHEISFTIIREEF-VPNTPKPCSICNQMGHESTECRGEAS---VPDSTVEAAPASGP 294
Query: 300 KKYQFLNIWVLREYLQYELDIPNP-PFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIRE 358
K + F++I +LREYL +EL I PF + ER +DD+VF+CFFVGNDFLPH+P+LEIRE
Sbjct: 295 KNFIFISIPILREYLSHELLISERLPFEFDIERAIDDWVFMCFFVGNDFLPHLPSLEIRE 354
Query: 359 GAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYEYN 418
GA+ L+ +YRR +MGG++TD+G+V+++R + ++ + ED IFQ+R + + N
Sbjct: 355 GALETLLSIYRRRLPSMGGFITDSGQVVVERALEILREIGTMEDSIFQRRHSEDERQKRN 414
Query: 419 EAMKLN--ARRESSEELLQAPVAVADTVKLGEP 449
E + RRE SE + ++ +LG P
Sbjct: 415 EQRREQDRKRREQSERTWSPSMQLS---QLGGP 444
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 95/202 (47%), Positives = 131/202 (64%), Gaps = 6/202 (2%)
Query: 444 VKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPY 503
V+L E G+KERYY +KF +S + + + + Y+EGLCWV +YYYQ V SW+W+YPY
Sbjct: 626 VRLWEQGWKERYYQNKFHVS--ADDNDFRSKLAAAYLEGLCWVLQYYYQGVPSWKWYYPY 683
Query: 504 HYAPFASDLKDLSDLEITFFLG-EPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIY 562
HYAPFASDL +++ F G PFRP +QLMG LPAAS + +P+ + LM+D SPI
Sbjct: 684 HYAPFASDLPAATNVNTKFDKGPRPFRPLEQLMGVLPAASGNFVPKTWAKLMSDDESPIL 743
Query: 563 KFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYV 622
FYP +F++DMNGK+ AW GVV LPFI+EK LL K + L EE+ RN + +++YV
Sbjct: 744 DFYPTEFEVDMNGKKAAWMGVVLLPFIEEKRLLDTLKTVYDDLRPEEVERNKLGYEVVYV 803
Query: 623 HPQHPLYQQITLYCQLYHQLPP 644
+H + + C +Y P
Sbjct: 804 GHKHAGFDSM---CTIYSNSAP 822
>gi|121701237|ref|XP_001268883.1| 5'->3' exoribonculease Dhp1 [Aspergillus clavatus NRRL 1]
gi|119397026|gb|EAW07457.1| 5'->3' exoribonculease Dhp1 [Aspergillus clavatus NRRL 1]
Length = 1043
Score = 442 bits (1138), Expect = e-121, Method: Compositional matrix adjust.
Identities = 220/439 (50%), Positives = 297/439 (67%), Gaps = 10/439 (2%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDP-QVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGI 59
MGVPA +RWL+++YP I V+EE P +V+GE + PVD +KPNPNG E DNLYLDMNGI
Sbjct: 1 MGVPALFRWLSNKYPKIISSVIEELPYEVNGEEI--PVDTTKPNPNGEEMDNLYLDMNGI 58
Query: 60 IHPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRR 119
+HPC HP+GKP P + ++ IF Y D + +VRPRK+L +A+DGVAPRAKMNQQR RR
Sbjct: 59 VHPCTHPEGKPPPANEQEMMVEIFKYTDRVVNMVRPRKVLMIAVDGVAPRAKMNQQRARR 118
Query: 120 FRAAKDAAEAEAEEERLRKEF-----EEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAA 174
FR+A++A EA+ ++E RK +A + L + +T DSNVITPGT FM +L+A+
Sbjct: 119 FRSAQEAREADEKKEEFRKMLAKQNGNKADQELHEEVIQKTWDSNVITPGTPFMDILAAS 178
Query: 175 LQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLD 234
L+Y+I +LN P W+ K+I+SDA VPGEGEHKIM ++R QR P DPNTRH +YGLD
Sbjct: 179 LRYWIAYKLNTDPAWEKLKIIISDATVPGEGEHKIMEFVRSQRAAPEHDPNTRHVIYGLD 238
Query: 235 ADLIMLSLATHEIHFSILRE-VITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVD 293
ADLIML LATHE HF +LRE V + C +CGQ GH A EC G+ + +++
Sbjct: 239 ADLIMLGLATHEPHFRVLREDVFFQESRPRTCNLCGQPGHKAEECRGQAKEKNGEFDEKQ 298
Query: 294 DTPIHKKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPT 353
K + +L++ VLREYL EL +P PFP + ER +DD+VF+CFFVGNDFLPH+P+
Sbjct: 299 KGS-SLKPFIWLHVSVLREYLAAELYVPQQPFPFDLERALDDWVFMCFFVGNDFLPHLPS 357
Query: 354 LEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQ 413
L+IRE I+ L+ ++R MGGYLT+ G V L R + +Q +A ED IF++R + ++
Sbjct: 358 LDIRENGIDTLIAIWRDNIPVMGGYLTEDGHVDLKRAQLILQGLAKQEDAIFRRRRQAEE 417
Query: 414 AYEYNEAMKLNARRESSEE 432
NE + + E+
Sbjct: 418 RKLANEKRRKQEAKAREED 436
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 113/229 (49%), Positives = 152/229 (66%), Gaps = 9/229 (3%)
Query: 442 DTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFY 501
DTV+L E GY +RYYA KF + PE+ + + V Y EGL WV YY+Q SW W++
Sbjct: 589 DTVRLWEEGYADRYYAQKFGVG-PED-KEFRHKVARAYAEGLAWVLLYYFQGCPSWTWYF 646
Query: 502 PYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPI 561
PYHYAPFA+D D+ D+EI+F G PFRPF+QLMG LPA+S+ A+PE + +LM++PSS I
Sbjct: 647 PYHYAPFAADFVDIGDMEISFDKGIPFRPFEQLMGVLPASSNHAIPEVFHDLMSNPSSEI 706
Query: 562 YKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLY 621
FYP DF +D+NGK+FAWQGV+ LPFIDE+ LL +K L+E+E RNSV D+L
Sbjct: 707 IDFYPEDFAVDLNGKKFAWQGVILLPFIDERRLLAAMEKKYPLLSEDEKLRNSVGRDVLL 766
Query: 622 VHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVNASGGMNGYIWLCERN 670
+ HPLYQ L Y + QD +++++ S G+ G + ERN
Sbjct: 767 ISEAHPLYQD--LVGNFYSK--KQDASKYKLNMRISDGLAGRV---ERN 808
>gi|338714846|ref|XP_001917535.2| PREDICTED: 5'-3' exoribonuclease 1 [Equus caballus]
Length = 1726
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 262/707 (37%), Positives = 376/707 (53%), Gaps = 113/707 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP FYRW+++RYP + +VV+E Q+ EFDNLYLDMNGII
Sbjct: 1 MGVPKFYRWISERYPC-LSEVVKEH-QIP------------------EFDNLYLDMNGII 40
Query: 61 HPCFHPDGKPAP--TSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C HP+ S D +F IF Y++ +F +++PRK+ ++A+DGVAPRAKMNQQR R
Sbjct: 41 HQCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RFR+AK+A E++++K E+ G+ L + + DSN ITPGT+FMA L L+YF
Sbjct: 101 RFRSAKEA------EDKIKKAIEK-GETLPTEAR---FDSNCITPGTEFMARLHEHLKYF 150
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
+ +++ WQ + S PGEGEHKIM +IR ++ P DPNTRHCLYGLDADLI
Sbjct: 151 VNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLI 210
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
ML L +HE HFS+LRE + G++ + VC ++T H
Sbjct: 211 MLGLTSHEAHFSLLREEVRFGGKKTQ-RVCAP----------------------EETTFH 247
Query: 299 KKKYQFLNIWVLREYLQYELDI--PNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEI 356
L++ ++REY+ YE + F + ERI+DD++ + F VGNDF+PH+P L I
Sbjct: 248 -----LLHLSLMREYIDYEFSVLKDKIAFKYDIERIIDDWILMGFLVGNDFIPHLPHLHI 302
Query: 357 REGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQK--------R 408
A+ LL Y +GGY+ ++G + L R EK++ ++ ++ + F +
Sbjct: 303 NHDALPLLYGTYITILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSEVFVDLKWFE 362
Query: 409 TRIQQAY-------------EYNEAMKLNARRES---------SEELLQAPVAVADTVKL 446
+++ Y Y E K + S EE++ + V D +
Sbjct: 363 SKVGNKYLNEAAGVAAEEAKSYKEKRKSKDQENSICWAALDTNGEEVVASKDNVEDETED 422
Query: 447 GE------PGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWF 500
+ YK YY K + D D YV+ + W+ YYY V SW W+
Sbjct: 423 DDLFETEFRQYKRTYYMTKMGVDVVS--DDFLADQAACYVQAIQWILHYYYHGVQSWSWY 480
Query: 501 YPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSP 560
YPYHYAPF SD++++S L I F LG+PF+PF+QL+ LPAAS + LP Y++LMT SP
Sbjct: 481 YPYHYAPFLSDIRNISALSIHFELGKPFKPFEQLLAVLPAASKNLLPTCYQHLMTSEDSP 540
Query: 561 IYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVM---- 616
I ++YPPDF+ D+NGK+ W+ VV +PFIDEK LL + L +EE RN
Sbjct: 541 IIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNYSLKKEERKRNRHSECLM 600
Query: 617 ------LDLLYVHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVNAS 657
+ Y P + I C Y + AW +D+N +
Sbjct: 601 CWYDRDTEFTYPSPWPEKFPAIERCCTRYKMISLD---AWRVDINKN 644
>gi|70995976|ref|XP_752743.1| 5'->3' exoribonculease Dhp1 [Aspergillus fumigatus Af293]
gi|74630336|sp|Q8TFZ1.4|XRN2_ASPFU RecName: Full=5'-3' exoribonuclease 2
gi|44889966|emb|CAD29606.2| 5'->3'exoribonuclease, putative [Aspergillus fumigatus]
gi|66850378|gb|EAL90705.1| 5'->3' exoribonculease Dhp1 [Aspergillus fumigatus Af293]
gi|159131498|gb|EDP56611.1| 5'->3' exoribonculease Dhp1 [Aspergillus fumigatus A1163]
Length = 1058
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 220/429 (51%), Positives = 297/429 (69%), Gaps = 10/429 (2%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDP-QVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGI 59
MGVPA +RWL+++YP I V+EE P +V+GE + PVD++KPNPNG E DNLYLDMNGI
Sbjct: 1 MGVPALFRWLSNKYPKIISPVIEELPYEVNGEEI--PVDITKPNPNGEEMDNLYLDMNGI 58
Query: 60 IHPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRR 119
+HPC HP+GKP P + ++ IF Y D + +VRPRKLL +A+DGVAPRAKMNQQR RR
Sbjct: 59 VHPCTHPEGKPPPANEQEMMVEIFKYTDRVVNMVRPRKLLMIAVDGVAPRAKMNQQRARR 118
Query: 120 FRAAKDAAEAEAEEERLRKEF-EEAGKLLSAKEKPE----TCDSNVITPGTQFMAVLSAA 174
FR+A++A EA+ ++E RK ++ G + + + E T DSNVITPGT FM +L+A+
Sbjct: 119 FRSAQEAKEADEKKEEFRKMLAKQNGNKVDEELQEEVVKKTWDSNVITPGTPFMDILAAS 178
Query: 175 LQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLD 234
L+Y+I +LN P W+ K+I+SDA VPGEGEHKIM +IR QR P DPNTRH +YGLD
Sbjct: 179 LRYWIAYKLNTDPAWEKLKIIISDATVPGEGEHKIMEFIRSQRAAPEHDPNTRHVIYGLD 238
Query: 235 ADLIMLSLATHEIHFSILRE-VITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVD 293
ADLIML LATHE HF +LRE V + C +CGQ GH A EC G+ + +++
Sbjct: 239 ADLIMLGLATHEPHFRVLREDVFFQESRARTCHLCGQQGHKAEECRGQAKEKNGEFD-EK 297
Query: 294 DTPIHKKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPT 353
K + +L++ +LREYL EL +P+ PFP + ER +DD+VF+CFFVGNDFLPH+P+
Sbjct: 298 QKGSSLKPFIWLHVSILREYLAAELYVPHQPFPFDLERALDDWVFMCFFVGNDFLPHLPS 357
Query: 354 LEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQ 413
L+IRE I+ L+ ++R MGGYLT+ G V L R + +Q +A ED IF++R + ++
Sbjct: 358 LDIRENGIDTLIAIWRDNIPVMGGYLTEDGHVDLKRAQLILQGLAKQEDAIFRRRRQAEE 417
Query: 414 AYEYNEAMK 422
NE +
Sbjct: 418 RKLANEKRR 426
Score = 219 bits (558), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 114/253 (45%), Positives = 162/253 (64%), Gaps = 8/253 (3%)
Query: 442 DTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFY 501
DTV+L E GY +RYY KF + +P++ + + V Y EGL WV YY+Q SW W+Y
Sbjct: 595 DTVRLWEEGYADRYYEQKFGV-DPQD-KEFRHKVARAYAEGLAWVLLYYFQGCPSWTWYY 652
Query: 502 PYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPI 561
PYHYAPFA+D D+ D+EITF G PF+PF+QLMG LPA+S+ A+P+ + +LM+ P S I
Sbjct: 653 PYHYAPFAADFVDIGDMEITFDKGVPFKPFEQLMGVLPASSNHAIPKVFHDLMSSPDSEI 712
Query: 562 YKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLY 621
FYP DF +D+NGK+FAWQGV+ LPFIDEK LL +K LTE+E RNSV ++L
Sbjct: 713 IDFYPEDFAVDLNGKKFAWQGVILLPFIDEKRLLAAMEKKYPLLTEDEKLRNSVGREVLL 772
Query: 622 VHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVNASGGMNGYIWLCERNGLRSIIPSPVK 681
+ HPLYQ L Y + Q +++++ S G+ G + E S +PS ++
Sbjct: 773 ISEAHPLYQD--LVANFYSK--KQGVQKYKLNMRISDGLAGKVERNEAYIPHSSLPSSLE 828
Query: 682 --GLPDIERNQAM 692
G+P +E ++++
Sbjct: 829 EYGMPSLEDDRSL 841
>gi|270007014|gb|EFA03462.1| hypothetical protein TcasGA2_TC013457 [Tribolium castaneum]
Length = 1531
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 251/659 (38%), Positives = 365/659 (55%), Gaps = 100/659 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP F+R++++RYP + + V+E PV FDNLYLDMNGII
Sbjct: 1 MGVPKFFRYISERYPC-LSEFVKE--------YQIPV-----------FDNLYLDMNGII 40
Query: 61 HPCFHPDGKPA--PTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C HPD + + +F IF YI+ +F +++P+K+ ++A+DGVAPRAKMNQQR R
Sbjct: 41 HMCSHPDDNNPHFRITEEKIFADIFHYIEFLFRMIKPQKVFFMAVDGVAPRAKMNQQRGR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RFR+AKDA + E E ++ ++ + E DSN ITPGT+FMA L L+YF
Sbjct: 101 RFRSAKDAEKMELEAKKKGEKLPDV----------ERFDSNCITPGTEFMARLHEQLKYF 150
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
+ ++++ W+ K+ILS PGEGEHKIM YIR R+ PG+DPNTRHCLYGLDADLI
Sbjct: 151 VVSKVSTDNMWKKCKIILSGHETPGEGEHKIMDYIRYIRSQPGYDPNTRHCLYGLDADLI 210
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
ML L TH+ HFS+LRE + + ++ V ++
Sbjct: 211 MLGLCTHDPHFSLLREEVKFGKKAKRSNVPEEI--------------------------- 243
Query: 299 KKKYQFLNIWVLREYLQYELD------IPNPPFPINFERIVDDFVFLCFFVGNDFLPHMP 352
++ L++ ++REYL+ E + + E I+DD++ + F VGNDF+P++P
Sbjct: 244 --RFYLLHLSLMREYLEMEFSPLKEALKDSDKIKFDIENIIDDWILMGFLVGNDFIPNLP 301
Query: 353 TLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVA---------VYEDQ 403
L I GA+ +L Y + GY+ +AG + L+R EKF++ +A + +D
Sbjct: 302 NLHISNGALPVLYKAYIEVLPTLDGYINEAGTLNLERFEKFMKKLADVDIKNFEEIQDDL 361
Query: 404 IFQKRTRIQQAYEY----NEAMKLNARRESSEELLQAPVAVADTVKLGE----------- 448
+ +R ++A + ++ +K N + + L +A D++ +
Sbjct: 362 TYFERKTGRKATAHLPVSSKPVK-NGEEKKIDPALAELIAATDSLAVSSDEEDFESSISS 420
Query: 449 ------PGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYP 502
YK+ YY +K E E +V ++ YV + W YYY VCSW WFYP
Sbjct: 421 EEDEAFKSYKDEYYRNKLEFQ--EVTREVMREQAEGYVRAIQWNLNYYYNGVCSWSWFYP 478
Query: 503 YHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIY 562
+HY+P+ SD+K SDL+I F LG+PF+P++QL+ LP AS LPE Y +LMTD +S I
Sbjct: 479 HHYSPYISDIKGFSDLKIDFELGKPFKPYEQLLAVLPPASKKLLPECYHSLMTDDNSLIK 538
Query: 563 KFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLY 621
+YP +FQ D+NGKR W+ VV +PFIDEK LL K LT EE RN+ L+Y
Sbjct: 539 SYYPEEFQTDLNGKRQEWEAVVLVPFIDEKNLLNAMKPCNELLTPEEAKRNNHGPMLVY 597
>gi|189237444|ref|XP_974750.2| PREDICTED: similar to 5-3 exoribonuclease 1 [Tribolium castaneum]
Length = 1485
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 251/659 (38%), Positives = 365/659 (55%), Gaps = 100/659 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP F+R++++RYP + + V+E PV FDNLYLDMNGII
Sbjct: 1 MGVPKFFRYISERYPC-LSEFVKE--------YQIPV-----------FDNLYLDMNGII 40
Query: 61 HPCFHPDGKPA--PTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C HPD + + +F IF YI+ +F +++P+K+ ++A+DGVAPRAKMNQQR R
Sbjct: 41 HMCSHPDDNNPHFRITEEKIFADIFHYIEFLFRMIKPQKVFFMAVDGVAPRAKMNQQRGR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RFR+AKDA + E E ++ ++ + E DSN ITPGT+FMA L L+YF
Sbjct: 101 RFRSAKDAEKMELEAKKKGEKLPDV----------ERFDSNCITPGTEFMARLHEQLKYF 150
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
+ ++++ W+ K+ILS PGEGEHKIM YIR R+ PG+DPNTRHCLYGLDADLI
Sbjct: 151 VVSKVSTDNMWKKCKIILSGHETPGEGEHKIMDYIRYIRSQPGYDPNTRHCLYGLDADLI 210
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
ML L TH+ HFS+LRE + + ++ V ++
Sbjct: 211 MLGLCTHDPHFSLLREEVKFGKKAKRSNVPEEI--------------------------- 243
Query: 299 KKKYQFLNIWVLREYLQYELD------IPNPPFPINFERIVDDFVFLCFFVGNDFLPHMP 352
++ L++ ++REYL+ E + + E I+DD++ + F VGNDF+P++P
Sbjct: 244 --RFYLLHLSLMREYLEMEFSPLKEALKDSDKIKFDIENIIDDWILMGFLVGNDFIPNLP 301
Query: 353 TLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVA---------VYEDQ 403
L I GA+ +L Y + GY+ +AG + L+R EKF++ +A + +D
Sbjct: 302 NLHISNGALPVLYKAYIEVLPTLDGYINEAGTLNLERFEKFMKKLADVDIKNFEEIQDDL 361
Query: 404 IFQKRTRIQQAYEY----NEAMKLNARRESSEELLQAPVAVADTVKLGE----------- 448
+ +R ++A + ++ +K N + + L +A D++ +
Sbjct: 362 TYFERKTGRKATAHLPVSSKPVK-NGEEKKIDPALAELIAATDSLAVSSDEEDFESSISS 420
Query: 449 ------PGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYP 502
YK+ YY +K E E +V ++ YV + W YYY VCSW WFYP
Sbjct: 421 EEDEAFKSYKDEYYRNKLEFQ--EVTREVMREQAEGYVRAIQWNLNYYYNGVCSWSWFYP 478
Query: 503 YHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIY 562
+HY+P+ SD+K SDL+I F LG+PF+P++QL+ LP AS LPE Y +LMTD +S I
Sbjct: 479 HHYSPYISDIKGFSDLKIDFELGKPFKPYEQLLAVLPPASKKLLPECYHSLMTDDNSLIK 538
Query: 563 KFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLY 621
+YP +FQ D+NGKR W+ VV +PFIDEK LL K LT EE RN+ L+Y
Sbjct: 539 SYYPEEFQTDLNGKRQEWEAVVLVPFIDEKNLLNAMKPCNELLTPEEAKRNNHGPMLVY 597
>gi|320038785|gb|EFW20720.1| 5'-3' exoribonculease Dhp1 [Coccidioides posadasii str. Silveira]
Length = 1016
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 224/413 (54%), Positives = 289/413 (69%), Gaps = 12/413 (2%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQ-VDGEGVARPVDVSKPNPNGMEFDNLYLDMNGI 59
MGVPA +RWL+ +YP I VVEE PQ +DGE PVD +KPNPNG E DNLYLDMNGI
Sbjct: 1 MGVPALFRWLSTKYPKIISAVVEELPQEIDGEEF--PVDTTKPNPNGEEMDNLYLDMNGI 58
Query: 60 IHPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRR 119
+HPC HP+GKPAP + ++ IF Y D + +VRPRKLL +A+DGVAPRAKMNQQR+RR
Sbjct: 59 VHPCTHPEGKPAPANEGEMMLEIFKYTDRVVNMVRPRKLLMIAVDGVAPRAKMNQQRSRR 118
Query: 120 FRAAKDAAEAEAEEER----LRKEFEEAGKLLSAKE-KPETCDSNVITPGTQFMAVLSAA 174
FR+A++A EA+ ++ LR++ G + A+E +T DSNVITPGT FM +LSAA
Sbjct: 119 FRSAQEAKEADEKKAEFAKLLRQQNRGKGDMEIAEEVVQKTWDSNVITPGTPFMDILSAA 178
Query: 175 LQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLD 234
L+Y++ +LN P W+ K+I+SDA VPGEGEHKIM +IR QR+ P D NTRH +YGLD
Sbjct: 179 LRYWVAYKLNTDPAWEKVKIIISDATVPGEGEHKIMEFIRSQRSCPEHDANTRHVIYGLD 238
Query: 235 ADLIMLSLATHEIHFSILRE-VITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVD 293
ADLIML LATHE HF +LRE V + C +CGQ GH+A C GK + +++
Sbjct: 239 ADLIMLGLATHEPHFRVLREDVFFQESKARTCHLCGQQGHVAEACTGKAKEKNGEFDEKQ 298
Query: 294 -DTPIHKKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMP 352
TP+ K + +L++ VLREYL E+ +PN PFP + ER +DD+VF+CFFVGNDFLPH+P
Sbjct: 299 RGTPL--KPFIWLHVSVLREYLAAEMYVPNQPFPFDLERALDDWVFMCFFVGNDFLPHLP 356
Query: 353 TLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIF 405
+LEIRE I+ L+ ++R MGGYLT G V L R + +Q +A ED IF
Sbjct: 357 SLEIRENGIDTLIAIWRDNIPLMGGYLTQDGNVDLKRAQLILQGLAKQEDAIF 409
Score = 220 bits (560), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 108/224 (48%), Positives = 149/224 (66%), Gaps = 6/224 (2%)
Query: 441 ADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWF 500
AD+V+L E GY +RYY KF + +P++I+ + V YVEGLCWV YY+Q SW W+
Sbjct: 571 ADSVRLWEQGYADRYYEQKFHV-DPKDIE-FRHKVARAYVEGLCWVLLYYFQGCPSWTWY 628
Query: 501 YPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSP 560
YPYHYAPFA+D DL ++I F G PFRPF+QLMG LPAAS+ A+PE +R+LM++P S
Sbjct: 629 YPYHYAPFAADFVDLEHMDIQFHKGAPFRPFEQLMGVLPAASNHAIPEIFRDLMSNPESE 688
Query: 561 IYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLL 620
I FYP +F ID+NGK+FAWQGV LPFIDE LL K L+EEE RN + D+L
Sbjct: 689 IIDFYPEEFPIDLNGKKFAWQGVALLPFIDESRLLEAMAKRYPRLSEEEKARNEMGRDIL 748
Query: 621 YVHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVNASGGMNGYI 664
++ +HPLY+++ Q P+ +++++ S G+ G +
Sbjct: 749 FISDRHPLYKELVANFYSKKQSVPK----FKLNMRVSEGLGGKV 788
>gi|303317580|ref|XP_003068792.1| XRN 5'-3' exonuclease N-terminus domain containing protein
[Coccidioides posadasii C735 delta SOWgp]
gi|240108473|gb|EER26647.1| XRN 5'-3' exonuclease N-terminus domain containing protein
[Coccidioides posadasii C735 delta SOWgp]
Length = 1016
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 224/413 (54%), Positives = 289/413 (69%), Gaps = 12/413 (2%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQ-VDGEGVARPVDVSKPNPNGMEFDNLYLDMNGI 59
MGVPA +RWL+ +YP I VVEE PQ +DGE PVD +KPNPNG E DNLYLDMNGI
Sbjct: 1 MGVPALFRWLSTKYPKIISAVVEELPQEIDGEEF--PVDTTKPNPNGEEMDNLYLDMNGI 58
Query: 60 IHPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRR 119
+HPC HP+GKPAP + ++ IF Y D + +VRPRKLL +A+DGVAPRAKMNQQR+RR
Sbjct: 59 VHPCTHPEGKPAPANEGEMMLEIFKYTDRVVNMVRPRKLLMIAVDGVAPRAKMNQQRSRR 118
Query: 120 FRAAKDAAEAEAEEER----LRKEFEEAGKLLSAKE-KPETCDSNVITPGTQFMAVLSAA 174
FR+A++A EA+ ++ LR++ G + A+E +T DSNVITPGT FM +LSAA
Sbjct: 119 FRSAQEAKEADEKKAEFAKLLRQQNRGKGDMEIAEEVVQKTWDSNVITPGTPFMDILSAA 178
Query: 175 LQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLD 234
L+Y++ +LN P W+ K+I+SDA VPGEGEHKIM +IR QR+ P D NTRH +YGLD
Sbjct: 179 LRYWVAYKLNTDPAWEKVKIIISDATVPGEGEHKIMEFIRSQRSCPEHDANTRHVIYGLD 238
Query: 235 ADLIMLSLATHEIHFSILRE-VITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVD 293
ADLIML LATHE HF +LRE V + C +CGQ GH+A C GK + +++
Sbjct: 239 ADLIMLGLATHEPHFRVLREDVFFQESKARTCHLCGQQGHVAEACTGKAKEKNGEFDEKQ 298
Query: 294 -DTPIHKKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMP 352
TP+ K + +L++ VLREYL E+ +PN PFP + ER +DD+VF+CFFVGNDFLPH+P
Sbjct: 299 RGTPL--KPFIWLHVSVLREYLAAEMYVPNQPFPFDLERALDDWVFMCFFVGNDFLPHLP 356
Query: 353 TLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIF 405
+LEIRE I+ L+ ++R MGGYLT G V L R + +Q +A ED IF
Sbjct: 357 SLEIRENGIDTLIAIWRDNIPLMGGYLTQDGNVDLKRAQLILQGLAKQEDAIF 409
Score = 219 bits (559), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 108/224 (48%), Positives = 149/224 (66%), Gaps = 6/224 (2%)
Query: 441 ADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWF 500
AD+V+L E GY +RYY KF + +P++I+ + V YVEGLCWV YY+Q SW W+
Sbjct: 571 ADSVRLWEQGYADRYYEQKFHV-DPKDIE-FRHKVARAYVEGLCWVLLYYFQGCPSWTWY 628
Query: 501 YPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSP 560
YPYHYAPFA+D DL ++I F G PFRPF+QLMG LPAAS+ A+PE +R+LM++P S
Sbjct: 629 YPYHYAPFAADFVDLEHMDIQFHKGAPFRPFEQLMGVLPAASNHAIPEIFRDLMSNPESE 688
Query: 561 IYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLL 620
I FYP +F ID+NGK+FAWQGV LPFIDE LL K L+EEE RN + D+L
Sbjct: 689 IIDFYPEEFPIDLNGKKFAWQGVALLPFIDESRLLEAMAKRYPRLSEEEKARNEMGRDIL 748
Query: 621 YVHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVNASGGMNGYI 664
++ +HPLY+++ Q P+ +++++ S G+ G +
Sbjct: 749 FISDRHPLYRELVANFYSKKQSVPK----FKLNMRVSEGLGGKV 788
>gi|392870672|gb|EAS32493.2| 5'-3' exoribonuclease 2 [Coccidioides immitis RS]
Length = 1016
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 224/413 (54%), Positives = 289/413 (69%), Gaps = 12/413 (2%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQ-VDGEGVARPVDVSKPNPNGMEFDNLYLDMNGI 59
MGVPA +RWL+ +YP I VVEE PQ +DGE PVD +KPNPNG E DNLYLDMNGI
Sbjct: 1 MGVPALFRWLSTKYPKIISAVVEELPQEIDGEEF--PVDTTKPNPNGEEMDNLYLDMNGI 58
Query: 60 IHPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRR 119
+HPC HP+GKPAP + ++ IF Y D + +VRPRKLL +A+DGVAPRAKMNQQR+RR
Sbjct: 59 VHPCTHPEGKPAPANEGEMMLEIFKYTDRVVNMVRPRKLLMIAVDGVAPRAKMNQQRSRR 118
Query: 120 FRAAKDAAEAEAEEER----LRKEFEEAGKLLSAKE-KPETCDSNVITPGTQFMAVLSAA 174
FR+A++A EA+ ++ LR++ G + A+E +T DSNVITPGT FM +LSAA
Sbjct: 119 FRSAQEAKEADEKKAEFAKLLRQQNRGKGDMEIAEEVVQKTWDSNVITPGTPFMDILSAA 178
Query: 175 LQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLD 234
L+Y++ +LN P W+ K+I+SDA VPGEGEHKIM +IR QR+ P D NTRH +YGLD
Sbjct: 179 LRYWVAYKLNTDPAWEKVKIIISDATVPGEGEHKIMEFIRSQRSCPEHDANTRHVIYGLD 238
Query: 235 ADLIMLSLATHEIHFSILRE-VITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVD 293
ADLIML LATHE HF +LRE V + C +CGQ GH+A C GK + +++
Sbjct: 239 ADLIMLGLATHEPHFRVLREDVFFQESKARTCHLCGQQGHVAEACTGKAKEKNGEFDEKQ 298
Query: 294 -DTPIHKKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMP 352
TP+ K + +L++ VLREYL E+ +PN PFP + ER +DD+VF+CFFVGNDFLPH+P
Sbjct: 299 RGTPL--KPFIWLHVSVLREYLAAEMYVPNQPFPFDLERALDDWVFMCFFVGNDFLPHLP 356
Query: 353 TLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIF 405
+LEIRE I+ L+ ++R MGGYLT G V L R + +Q +A ED IF
Sbjct: 357 SLEIRENGIDTLIAIWRDNIPLMGGYLTQDGNVDLKRAQLILQGLAKQEDAIF 409
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 108/224 (48%), Positives = 149/224 (66%), Gaps = 6/224 (2%)
Query: 441 ADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWF 500
AD+V+L E GY +RYY KF + +P++I+ + V YVEGLCWV YY+Q SW W+
Sbjct: 571 ADSVRLWEQGYADRYYEQKFHV-DPKDIE-FRHKVARAYVEGLCWVLLYYFQGCPSWTWY 628
Query: 501 YPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSP 560
YPYHYAPFA+D DL ++I F G PFRPF+QLMG LPAAS+ A+PE +R+LM++P S
Sbjct: 629 YPYHYAPFAADFVDLEHMDIQFHKGAPFRPFEQLMGVLPAASNHAIPEIFRDLMSNPESE 688
Query: 561 IYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLL 620
I FYP +F ID+NGK+FAWQGV LPFIDE LL K L+EEE RN + D+L
Sbjct: 689 IIDFYPEEFPIDLNGKKFAWQGVALLPFIDESRLLEAMAKRYPRLSEEEKARNEMGRDIL 748
Query: 621 YVHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVNASGGMNGYI 664
++ +HPLY+++ Q P+ +++++ S G+ G +
Sbjct: 749 FISDRHPLYKELVANFYSKKQTVPK----FKLNMRVSEGLGGKV 788
>gi|119186689|ref|XP_001243951.1| hypothetical protein CIMG_03392 [Coccidioides immitis RS]
Length = 1031
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 224/413 (54%), Positives = 289/413 (69%), Gaps = 12/413 (2%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQ-VDGEGVARPVDVSKPNPNGMEFDNLYLDMNGI 59
MGVPA +RWL+ +YP I VVEE PQ +DGE PVD +KPNPNG E DNLYLDMNGI
Sbjct: 16 MGVPALFRWLSTKYPKIISAVVEELPQEIDGEEF--PVDTTKPNPNGEEMDNLYLDMNGI 73
Query: 60 IHPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRR 119
+HPC HP+GKPAP + ++ IF Y D + +VRPRKLL +A+DGVAPRAKMNQQR+RR
Sbjct: 74 VHPCTHPEGKPAPANEGEMMLEIFKYTDRVVNMVRPRKLLMIAVDGVAPRAKMNQQRSRR 133
Query: 120 FRAAKDAAEAEAEEER----LRKEFEEAGKLLSAKE-KPETCDSNVITPGTQFMAVLSAA 174
FR+A++A EA+ ++ LR++ G + A+E +T DSNVITPGT FM +LSAA
Sbjct: 134 FRSAQEAKEADEKKAEFAKLLRQQNRGKGDMEIAEEVVQKTWDSNVITPGTPFMDILSAA 193
Query: 175 LQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLD 234
L+Y++ +LN P W+ K+I+SDA VPGEGEHKIM +IR QR+ P D NTRH +YGLD
Sbjct: 194 LRYWVAYKLNTDPAWEKVKIIISDATVPGEGEHKIMEFIRSQRSCPEHDANTRHVIYGLD 253
Query: 235 ADLIMLSLATHEIHFSILRE-VITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVD 293
ADLIML LATHE HF +LRE V + C +CGQ GH+A C GK + +++
Sbjct: 254 ADLIMLGLATHEPHFRVLREDVFFQESKARTCHLCGQQGHVAEACTGKAKEKNGEFDEKQ 313
Query: 294 -DTPIHKKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMP 352
TP+ K + +L++ VLREYL E+ +PN PFP + ER +DD+VF+CFFVGNDFLPH+P
Sbjct: 314 RGTPL--KPFIWLHVSVLREYLAAEMYVPNQPFPFDLERALDDWVFMCFFVGNDFLPHLP 371
Query: 353 TLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIF 405
+LEIRE I+ L+ ++R MGGYLT G V L R + +Q +A ED IF
Sbjct: 372 SLEIRENGIDTLIAIWRDNIPLMGGYLTQDGNVDLKRAQLILQGLAKQEDAIF 424
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 108/224 (48%), Positives = 149/224 (66%), Gaps = 6/224 (2%)
Query: 441 ADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWF 500
AD+V+L E GY +RYY KF + +P++I+ + V YVEGLCWV YY+Q SW W+
Sbjct: 586 ADSVRLWEQGYADRYYEQKFHV-DPKDIE-FRHKVARAYVEGLCWVLLYYFQGCPSWTWY 643
Query: 501 YPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSP 560
YPYHYAPFA+D DL ++I F G PFRPF+QLMG LPAAS+ A+PE +R+LM++P S
Sbjct: 644 YPYHYAPFAADFVDLEHMDIQFHKGAPFRPFEQLMGVLPAASNHAIPEIFRDLMSNPESE 703
Query: 561 IYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLL 620
I FYP +F ID+NGK+FAWQGV LPFIDE LL K L+EEE RN + D+L
Sbjct: 704 IIDFYPEEFPIDLNGKKFAWQGVALLPFIDESRLLEAMAKRYPRLSEEEKARNEMGRDIL 763
Query: 621 YVHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVNASGGMNGYI 664
++ +HPLY+++ Q P+ +++++ S G+ G +
Sbjct: 764 FISDRHPLYKELVANFYSKKQTVPK----FKLNMRVSEGLGGKV 803
>gi|297672153|ref|XP_002814174.1| PREDICTED: 5'-3' exoribonuclease 1 isoform 1 [Pongo abelii]
Length = 1706
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 261/707 (36%), Positives = 377/707 (53%), Gaps = 113/707 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP FYRW+++RYP + +VV+E Q+ EFDNLYLDMNGII
Sbjct: 1 MGVPKFYRWISERYPC-LSEVVKEH-QIP------------------EFDNLYLDMNGII 40
Query: 61 HPCFHPDGKPAP--TSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C HP+ S D +F IF Y++ +F +++PRK+ ++A+DGVAPRAKMNQQR R
Sbjct: 41 HQCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RFR+AK+A E++++K E+ G+ L + + DSN ITPGT+FMA L L+YF
Sbjct: 101 RFRSAKEA------EDKIKKAIEK-GETLPTEAR---FDSNCITPGTEFMARLHEHLKYF 150
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
+ +++ WQ + S PGEGEHKIM +IR ++ P DPNTRHCLYGLDADLI
Sbjct: 151 VNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLI 210
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
ML L +HE HFS+LRE + G++ + VC ++T H
Sbjct: 211 MLGLTSHEAHFSLLREEVRFGGKKTQ-RVCAP----------------------EETTFH 247
Query: 299 KKKYQFLNIWVLREYLQYELDI--PNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEI 356
L++ ++REY+ YE + F + ERI+DD++ + F VGNDF+PH+P L I
Sbjct: 248 -----LLHLSLMREYIDYEFSLLKEKITFKYDIERIIDDWILMGFLVGNDFIPHLPHLHI 302
Query: 357 REGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQK--------R 408
A+ LL Y +GGY+ ++G + L R EK++ ++ ++ + F +
Sbjct: 303 NHDALPLLYGTYITILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSEVFVDLKWFE 362
Query: 409 TRIQQAY-------------EYNEAMKLNARRES---------------SEELLQAPVAV 440
+++ Y Y E KL + S S++ L+
Sbjct: 363 SKVGNKYLNEAAGVAAEEARNYKEKKKLKGQENSLCWAALDKNEGEMVTSKDNLEDEAED 422
Query: 441 ADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWF 500
D + YK YY K + D D YV+ + W+ YYY V SW W+
Sbjct: 423 DDLFETEFRQYKRTYYMTKMGVDVVS--DDFLADQAACYVQAIQWILHYYYHGVQSWSWY 480
Query: 501 YPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSP 560
YPYHYAPF SD++++S L+I F LG+PF+PF+QL+ LPAAS + LP Y++LMT+ SP
Sbjct: 481 YPYHYAPFLSDIRNISTLKIHFELGKPFKPFEQLLAVLPAASKNLLPTCYQHLMTNEDSP 540
Query: 561 IYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVM---- 616
I ++YP DF+ D+NGK+ W+ VV +PFIDEK LL + L +EE RN
Sbjct: 541 IIEYYPLDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEERKRNQHSECLM 600
Query: 617 ------LDLLYVHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVNAS 657
+ +Y P + I C Y + AW +D+N +
Sbjct: 601 CWYDRDTEFIYPSPWPEKFPAIERCCTRYKIISLD---AWRVDINKN 644
>gi|297672155|ref|XP_002814175.1| PREDICTED: 5'-3' exoribonuclease 1 isoform 2 [Pongo abelii]
Length = 1693
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 261/707 (36%), Positives = 377/707 (53%), Gaps = 113/707 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP FYRW+++RYP + +VV+E Q+ EFDNLYLDMNGII
Sbjct: 1 MGVPKFYRWISERYPC-LSEVVKEH-QIP------------------EFDNLYLDMNGII 40
Query: 61 HPCFHPDGKPAP--TSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C HP+ S D +F IF Y++ +F +++PRK+ ++A+DGVAPRAKMNQQR R
Sbjct: 41 HQCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RFR+AK+A E++++K E+ G+ L + + DSN ITPGT+FMA L L+YF
Sbjct: 101 RFRSAKEA------EDKIKKAIEK-GETLPTEAR---FDSNCITPGTEFMARLHEHLKYF 150
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
+ +++ WQ + S PGEGEHKIM +IR ++ P DPNTRHCLYGLDADLI
Sbjct: 151 VNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLI 210
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
ML L +HE HFS+LRE + G++ + VC ++T H
Sbjct: 211 MLGLTSHEAHFSLLREEVRFGGKKTQ-RVCAP----------------------EETTFH 247
Query: 299 KKKYQFLNIWVLREYLQYELDI--PNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEI 356
L++ ++REY+ YE + F + ERI+DD++ + F VGNDF+PH+P L I
Sbjct: 248 -----LLHLSLMREYIDYEFSLLKEKITFKYDIERIIDDWILMGFLVGNDFIPHLPHLHI 302
Query: 357 REGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQK--------R 408
A+ LL Y +GGY+ ++G + L R EK++ ++ ++ + F +
Sbjct: 303 NHDALPLLYGTYITILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSEVFVDLKWFE 362
Query: 409 TRIQQAY-------------EYNEAMKLNARRES---------------SEELLQAPVAV 440
+++ Y Y E KL + S S++ L+
Sbjct: 363 SKVGNKYLNEAAGVAAEEARNYKEKKKLKGQENSLCWAALDKNEGEMVTSKDNLEDEAED 422
Query: 441 ADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWF 500
D + YK YY K + D D YV+ + W+ YYY V SW W+
Sbjct: 423 DDLFETEFRQYKRTYYMTKMGVDVVS--DDFLADQAACYVQAIQWILHYYYHGVQSWSWY 480
Query: 501 YPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSP 560
YPYHYAPF SD++++S L+I F LG+PF+PF+QL+ LPAAS + LP Y++LMT+ SP
Sbjct: 481 YPYHYAPFLSDIRNISTLKIHFELGKPFKPFEQLLAVLPAASKNLLPTCYQHLMTNEDSP 540
Query: 561 IYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVM---- 616
I ++YP DF+ D+NGK+ W+ VV +PFIDEK LL + L +EE RN
Sbjct: 541 IIEYYPLDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEERKRNQHSECLM 600
Query: 617 ------LDLLYVHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVNAS 657
+ +Y P + I C Y + AW +D+N +
Sbjct: 601 CWYDRDTEFIYPSPWPEKFPAIERCCTRYKIISLD---AWRVDINKN 644
>gi|226289075|gb|EEH44587.1| 5'-3' exoribonuclease [Paracoccidioides brasiliensis Pb18]
Length = 1049
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 222/426 (52%), Positives = 289/426 (67%), Gaps = 12/426 (2%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPA +RWL+ +YP I VVEE PQ E PVD +KPNPNG E DNLYLDMNGI+
Sbjct: 1 MGVPALFRWLSSKYPKIISSVVEELPQEINEQEV-PVDTTKPNPNGEEMDNLYLDMNGIV 59
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+GKP P++ +++ IF Y D + +VRPRKLL +A+DGVAPRAKMNQQR+RRF
Sbjct: 60 HPCTHPEGKPPPSNEEEMMLEIFKYTDRVVNMVRPRKLLMIAVDGVAPRAKMNQQRSRRF 119
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPE-----TCDSNVITPGTQFMAVLSAAL 175
R+A++A EA+ ++ K + S +E E T DSNVITPGT FM +L+AAL
Sbjct: 120 RSAQEAKEADEKKVEFAKLLRKQNGKKSCEEIVEEVTMKTWDSNVITPGTPFMDILAAAL 179
Query: 176 QYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDA 235
+Y++ +LN P W+ KVI+SDA VPGEGEHKIM +IR QR+ P DPNTRH +YGLDA
Sbjct: 180 RYWVAYKLNTDPAWEKLKVIISDATVPGEGEHKIMEFIRSQRSCPEHDPNTRHVIYGLDA 239
Query: 236 DLIMLSLATHEIHFSILRE-VITLPGQQEKCFVCGQVGHLAAECHG--KPGDNPADWNGV 292
DLIML LATHE HF +LRE V + C +CGQ GH+A C G K + D G
Sbjct: 240 DLIMLGLATHEPHFRVLREDVFFQESKGRTCHLCGQTGHIAEACKGTAKEKNGEFDEKGK 299
Query: 293 DDTPIHKKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMP 352
+ K + +L++ VLREYL E+ +P PFP + ER +DD+VF+CFFVGNDFLPH+P
Sbjct: 300 GSS---LKPFIWLHVSVLREYLAVEMHVPQQPFPFDLERALDDWVFMCFFVGNDFLPHLP 356
Query: 353 TLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQ 412
+L+IRE I+ L+ ++R AMGGYLT G V L+R + +Q +A ED IF++R + +
Sbjct: 357 SLDIRENGIDTLIAIWRDNIPAMGGYLTKDGHVDLNRAQLILQGLAKQEDAIFRRRRQTE 416
Query: 413 QAYEYN 418
+ N
Sbjct: 417 ERKNAN 422
Score = 212 bits (540), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 111/229 (48%), Positives = 147/229 (64%), Gaps = 9/229 (3%)
Query: 442 DTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFY 501
DTV+L E GY +RYY KF++ +P++I+ + V YVEGL WV YY+Q SW W+Y
Sbjct: 569 DTVRLWEEGYADRYYEQKFQV-HPKDIE-FRHKVARAYVEGLAWVLLYYFQGCPSWTWYY 626
Query: 502 PYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPI 561
PYHYAPFA+D L + I F G PF+PF+QLMG LPAAS+ A+PE + +LM+DP+S I
Sbjct: 627 PYHYAPFAADFVGLGKMNIEFNRGAPFKPFEQLMGVLPAASNHAIPEVFHDLMSDPNSEI 686
Query: 562 YKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLY 621
FYP +F ID+NGK+FAWQGV LPFIDEK LL +K L+ EE RNS D+L
Sbjct: 687 IDFYPEEFPIDLNGKKFAWQGVALLPFIDEKRLLVAMEKRYHLLSSEEHARNSTGRDVLL 746
Query: 622 VHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVNASGGMNGYIWLCERN 670
V +HPLY +T Y + Q ++++ S G+ G + ERN
Sbjct: 747 VSDRHPLYDNLT--ANFYSK--KQGLSKLKLNMRVSEGLGGKV---ERN 788
>gi|73990326|ref|XP_852437.1| PREDICTED: 5'-3' exoribonuclease 1 isoform 3 [Canis lupus
familiaris]
Length = 1705
Score = 440 bits (1132), Expect = e-120, Method: Compositional matrix adjust.
Identities = 251/653 (38%), Positives = 362/653 (55%), Gaps = 100/653 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP FYRW+++RYP + +VV+E Q+ EFDNLYLDMNGII
Sbjct: 1 MGVPKFYRWISERYPC-LSEVVKEH-QIP------------------EFDNLYLDMNGII 40
Query: 61 HPCFHPDGKPAP--TSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C HP+ S D +F IF Y++ +F +++PRK+ ++A+DGVAPRAKMNQQR R
Sbjct: 41 HQCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RFR+AK+A E++++K E+ G+ L + + DSN ITPGT+FMA L L+YF
Sbjct: 101 RFRSAKEA------EDKIKKALEK-GETLPTEAR---FDSNCITPGTEFMARLHEHLKYF 150
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
+ +++ WQ + S PGEGEHKIM +IR ++ P DPNTRHCLYGLDADLI
Sbjct: 151 VNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLI 210
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
ML L +HE HFS+LRE + G++ + VC ++T H
Sbjct: 211 MLGLTSHETHFSLLREEVRFGGKKTQ-RVCAP----------------------EETTFH 247
Query: 299 KKKYQFLNIWVLREYLQYELD--IPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEI 356
L++ ++REY+ YE F + ERI+DD++ + F VGNDF+PH+P L I
Sbjct: 248 -----LLHLSLMREYIDYEFSELKAKITFKYDIERIIDDWILMGFLVGNDFIPHLPHLHI 302
Query: 357 REGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQK--------R 408
A+ LL Y +GGY+ ++G + L R EK++ ++ ++ + F +
Sbjct: 303 NHDALPLLYGTYITILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSEVFVDLKWFE 362
Query: 409 TRIQQAY-------------EYNEAMKLNARR---------ESSEELLQAPVAVADTVKL 446
+++ Y Y E K + ++ EE++ + + D +
Sbjct: 363 SKVGNKYLNEAAGVAAEEARNYKEKKKSKGQENAICWAALDKNGEEVVTSKDNLEDETED 422
Query: 447 GE------PGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWF 500
+ YK YY K + D D YV+ + W+ YYY V SW W+
Sbjct: 423 DDLFETEFRQYKRTYYMTKMGVDVVS--DDFLADQAACYVQAIQWILHYYYHGVQSWSWY 480
Query: 501 YPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSP 560
YPYHYAPF SD++++S L+I F LG+PF+PF+QL+ LPAAS + LP Y++LMT SP
Sbjct: 481 YPYHYAPFLSDIRNISTLKIHFELGKPFKPFEQLLAVLPAASKNLLPTCYQHLMTSEDSP 540
Query: 561 IYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRN 613
I ++YPPDF+ D+NGK+ W+ VV +PFIDEK LL + L +EE RN
Sbjct: 541 IIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMEACNHSLKKEERKRN 593
>gi|345789293|ref|XP_534294.3| PREDICTED: 5'-3' exoribonuclease 1 isoform 2 [Canis lupus
familiaris]
Length = 1692
Score = 440 bits (1132), Expect = e-120, Method: Compositional matrix adjust.
Identities = 251/653 (38%), Positives = 362/653 (55%), Gaps = 100/653 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP FYRW+++RYP + +VV+E Q+ EFDNLYLDMNGII
Sbjct: 1 MGVPKFYRWISERYPC-LSEVVKEH-QIP------------------EFDNLYLDMNGII 40
Query: 61 HPCFHPDGKPAP--TSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C HP+ S D +F IF Y++ +F +++PRK+ ++A+DGVAPRAKMNQQR R
Sbjct: 41 HQCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RFR+AK+A E++++K E+ G+ L + + DSN ITPGT+FMA L L+YF
Sbjct: 101 RFRSAKEA------EDKIKKALEK-GETLPTEAR---FDSNCITPGTEFMARLHEHLKYF 150
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
+ +++ WQ + S PGEGEHKIM +IR ++ P DPNTRHCLYGLDADLI
Sbjct: 151 VNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLI 210
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
ML L +HE HFS+LRE + G++ + VC ++T H
Sbjct: 211 MLGLTSHETHFSLLREEVRFGGKKTQ-RVCAP----------------------EETTFH 247
Query: 299 KKKYQFLNIWVLREYLQYELD--IPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEI 356
L++ ++REY+ YE F + ERI+DD++ + F VGNDF+PH+P L I
Sbjct: 248 -----LLHLSLMREYIDYEFSELKAKITFKYDIERIIDDWILMGFLVGNDFIPHLPHLHI 302
Query: 357 REGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQK--------R 408
A+ LL Y +GGY+ ++G + L R EK++ ++ ++ + F +
Sbjct: 303 NHDALPLLYGTYITILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSEVFVDLKWFE 362
Query: 409 TRIQQAY-------------EYNEAMKLNARR---------ESSEELLQAPVAVADTVKL 446
+++ Y Y E K + ++ EE++ + + D +
Sbjct: 363 SKVGNKYLNEAAGVAAEEARNYKEKKKSKGQENAICWAALDKNGEEVVTSKDNLEDETED 422
Query: 447 GE------PGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWF 500
+ YK YY K + D D YV+ + W+ YYY V SW W+
Sbjct: 423 DDLFETEFRQYKRTYYMTKMGVDVVS--DDFLADQAACYVQAIQWILHYYYHGVQSWSWY 480
Query: 501 YPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSP 560
YPYHYAPF SD++++S L+I F LG+PF+PF+QL+ LPAAS + LP Y++LMT SP
Sbjct: 481 YPYHYAPFLSDIRNISTLKIHFELGKPFKPFEQLLAVLPAASKNLLPTCYQHLMTSEDSP 540
Query: 561 IYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRN 613
I ++YPPDF+ D+NGK+ W+ VV +PFIDEK LL + L +EE RN
Sbjct: 541 IIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMEACNHSLKKEERKRN 593
>gi|351699398|gb|EHB02317.1| 5'-3' exoribonuclease 1 [Heterocephalus glaber]
Length = 1707
Score = 440 bits (1132), Expect = e-120, Method: Compositional matrix adjust.
Identities = 251/653 (38%), Positives = 363/653 (55%), Gaps = 100/653 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP FYRW+++RYP + +VV+E Q+ EFDNLYLDMNGII
Sbjct: 1 MGVPKFYRWISERYPC-LSEVVKEH-QIP------------------EFDNLYLDMNGII 40
Query: 61 HPCFHPDGKPAP--TSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C HP+ S D +F IF Y++ +F +++PRK+ ++A+DGVAPRAKMNQQR R
Sbjct: 41 HQCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RFR+AK+A E++++K E+ G+ L + + DSN ITPGT+FMA L L+YF
Sbjct: 101 RFRSAKEA------EDKIKKAIEK-GETLPTEAR---FDSNCITPGTEFMARLHEHLKYF 150
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
+ +++ WQ + S PGEGEHKIM +IR ++ P DPNTRHCLYGLDADLI
Sbjct: 151 VNVKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLI 210
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
ML L +HE HFS+LRE + G++ + VC ++T H
Sbjct: 211 MLGLTSHEAHFSLLREEVRFGGKKTQ-RVCAP----------------------EETTFH 247
Query: 299 KKKYQFLNIWVLREYLQYELDI--PNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEI 356
L++ ++REY+ YE + N F + ERI+DD++ + F VGNDF+PH+P L I
Sbjct: 248 -----LLHLSLMREYIDYEFSVLKENITFKYDIERIIDDWILMGFLVGNDFIPHLPHLHI 302
Query: 357 REGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQK--------R 408
A+ LL Y +GGY+ ++G + L R EK++ ++ ++ + F +
Sbjct: 303 NHDALPLLYGTYITILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSEVFVDLKWFE 362
Query: 409 TRIQQAY----------------------EYNEAMKLNARRESSEELLQAPVAVADTVKL 446
+++ Y ++ A +S E++ + + D +
Sbjct: 363 SKVGNKYLNEAAGIAAEEAKNYKEKKKSKGQENSVCWAALDKSEGEMVVSKDNLEDETED 422
Query: 447 GE------PGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWF 500
+ YK YY K + D D + YV+ + W+ YYY V SW W+
Sbjct: 423 DDLFETEFRQYKRTYYMTKMGVDVVS--DDFLADQAVCYVQAIQWILHYYYHGVQSWSWY 480
Query: 501 YPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSP 560
YPYHYAPF SD++++S L+I F LG+PF+PF+QL+ LPAAS + LP Y++LMT SP
Sbjct: 481 YPYHYAPFLSDIRNISTLKIHFELGKPFKPFEQLLAVLPAASKNLLPVCYQHLMTSEDSP 540
Query: 561 IYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRN 613
I ++YPPDF+ D+NGK+ W+ VV +PFIDEK LL + L EEE RN
Sbjct: 541 IIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKEEERKRN 593
>gi|47216611|emb|CAG10909.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1574
Score = 440 bits (1131), Expect = e-120, Method: Compositional matrix adjust.
Identities = 246/623 (39%), Positives = 356/623 (57%), Gaps = 96/623 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP FYRW+++RYP + ++V+E Q+ EFDNLYLDMNGII
Sbjct: 1 MGVPKFYRWISERYPC-LSEIVKEH-QIP------------------EFDNLYLDMNGII 40
Query: 61 HPCFHPDGKPAP--TSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C HP+ + S + +F IF Y++ +F +++PRK+ ++A+DGVAPRAKMNQQR R
Sbjct: 41 HQCSHPNDEDVHFRISEEKIFADIFHYVEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RFR+AK+A EE+++K ++ G++L + + DSN ITPGT FMA L L+YF
Sbjct: 101 RFRSAKEA------EEKIKKALDK-GEVLPTEAR---FDSNCITPGTDFMARLQEQLEYF 150
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
+ ++L+ WQ +V LS PGEGEHKIM +IR + N PG DPNTRHCLYGLDADLI
Sbjct: 151 VHSKLSTDKLWQNVRVYLSGHETPGEGEHKIMEFIRSENNGPGHDPNTRHCLYGLDADLI 210
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
ML L +HE +FS+LRE + G++ + + T
Sbjct: 211 MLGLTSHEPNFSLLREEVRFGGKKSQKRI---------------------------TAPE 243
Query: 299 KKKYQFLNIWVLREYLQYELDIPNPPFPINF--ERIVDDFVFLCFFVGNDFLPHMPTLEI 356
+ + L++ ++REY+ YE + + ERI+DD++ + F +GNDF+PH+P L I
Sbjct: 244 ETTFHLLHLSLMREYIDYEFSVLRNHLGSTYDLERIIDDWILMGFLIGNDFIPHLPHLHI 303
Query: 357 REGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQK--------R 408
A+ LL Y ++GGYL + G + L EK+++ ++ ++ + F +
Sbjct: 304 SHDALPLLYKTYISVLPSLGGYLNENGNLNLKNFEKYLEKLSEFDREHFSEVFVDLKWFE 363
Query: 409 TRIQQAYEYNEAMKLNARRESSEELLQAPVAVADTVKLGEPG----------------YK 452
+++ Y NEA L A +E++ + A +PG YK
Sbjct: 364 SKVGNKY-LNEAAGLAAEKEAASKAADQQEAAPGLTAAEKPGDEEEEEEDLFETEFRQYK 422
Query: 453 ERYYADKFEISNPEEIDKVKKDVVL----KYVEGLCWVCRYYYQDVCSWQWFYPYHYAPF 508
YY K +D V D + YVEG+ W+ YYY V SW W+YPYHYAPF
Sbjct: 423 RTYYMTKM------GVDVVSDDFLALQARCYVEGIQWILHYYYHGVQSWSWYYPYHYAPF 476
Query: 509 ASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPD 568
SD+K++++L++TF L +PF PF QL+ LPAAS LPE YR+LMT +SPI ++YP D
Sbjct: 477 LSDIKNVAELKLTFDLEKPFMPFQQLLAVLPAASMELLPEAYRHLMTSENSPIIEYYPHD 536
Query: 569 FQIDMNGKRFAWQGVVKLPFIDE 591
F+ D+NGK+ W+ VV +PFIDE
Sbjct: 537 FKTDLNGKQQEWEAVVLIPFIDE 559
>gi|296491011|tpg|DAA33109.1| TPA: 5'-3' exoribonuclease 1 isoform 1 [Bos taurus]
Length = 1690
Score = 440 bits (1131), Expect = e-120, Method: Compositional matrix adjust.
Identities = 252/653 (38%), Positives = 363/653 (55%), Gaps = 100/653 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP FYRW+++RYP + +VV+E Q+ EFDNLYLDMNGII
Sbjct: 1 MGVPKFYRWISERYPC-LSEVVKEH-QIP------------------EFDNLYLDMNGII 40
Query: 61 HPCFHPDGKPAP--TSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C HP+ S D +F IF Y++ +F +++PRK+ ++A+DGVAPRAKMNQQR R
Sbjct: 41 HQCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RFR+AK+A EE+++K E+ G+ L A+ + DSN ITPGT+FMA L L+YF
Sbjct: 101 RFRSAKEA------EEKIKKAIEK-GETLPAEAR---FDSNCITPGTEFMARLHEHLKYF 150
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
+ +++ WQ + S PGEGEHKIM +IR ++ P DPNTRHCLYGLDADLI
Sbjct: 151 VNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLI 210
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
ML L +HE HFS+LRE + G++ + VC ++T H
Sbjct: 211 MLGLTSHEAHFSLLREEVRFGGKKTQ-RVCAP----------------------EETTFH 247
Query: 299 KKKYQFLNIWVLREYLQYELDI--PNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEI 356
L++ ++REY+ YE F + ERI+DD++ + F VGNDF+PH+P L I
Sbjct: 248 -----LLHLSLMREYIDYEFSALKDKITFKYDIERIIDDWILMGFLVGNDFIPHLPHLHI 302
Query: 357 REGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQK--------R 408
A+ LL Y +GGY+ ++G + L R EK++ ++ ++ + F +
Sbjct: 303 NHDALPLLYGTYITILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSEVFVDLKWFE 362
Query: 409 TRIQQAY----------------------EYNEAMKLNARRESSEELLQAPVAVADTVKL 446
+++ Y ++ A ++ EE++ + V + ++
Sbjct: 363 SKVGNKYLNEAAGVAAEEAKSYKEKKKSKGQENSICWAALDKNGEEVVTSKDNVEEEMED 422
Query: 447 GE------PGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWF 500
+ YK YY K + D D YV+ + W+ YYY V SW WF
Sbjct: 423 DDLFETEFRQYKRTYYMTKMGVDVVS--DDFLADQAACYVQAIQWILHYYYHGVQSWSWF 480
Query: 501 YPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSP 560
YPYHYAPF SD++++S L+I F LG+PF+PF+QL+ LPAAS + LP Y++LMT SP
Sbjct: 481 YPYHYAPFLSDIRNISTLKIHFELGKPFKPFEQLLAVLPAASKNLLPACYQHLMTSDDSP 540
Query: 561 IYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRN 613
I ++YPPDF+ D+NGK+ W+ VV +PFIDEK LL + L +EE RN
Sbjct: 541 IIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEERKRN 593
>gi|119599379|gb|EAW78973.1| 5'-3' exoribonuclease 1, isoform CRA_c [Homo sapiens]
Length = 1693
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 261/707 (36%), Positives = 377/707 (53%), Gaps = 114/707 (16%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP FYRW+++RYP + +VV+E Q+ EFDNLYLDMNGII
Sbjct: 1 MGVPKFYRWISERYPC-LSEVVKEH-QIP------------------EFDNLYLDMNGII 40
Query: 61 HPCFHPDGKPAP--TSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C HP+ S D +F IF Y++ +F +++PRK+ ++A+DGVAPRAKMNQQR R
Sbjct: 41 HQCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RFR+AK+A E++++K E+ G+ L + + DSN ITPGT+FMA L L+YF
Sbjct: 101 RFRSAKEA------EDKIKKAIEK-GETLPTEAR---FDSNCITPGTEFMARLHEHLKYF 150
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
+ +++ WQ + S PGEGEHKIM +IR ++ P DPNTRHCLYGLDADLI
Sbjct: 151 VNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLI 210
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
ML L +HE HFS+LRE + G++ + VC ++T H
Sbjct: 211 MLGLTSHEAHFSLLREEVRFGGKKTQ-RVCAP----------------------EETTFH 247
Query: 299 KKKYQFLNIWVLREYLQYELDI--PNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEI 356
L++ ++REY+ YE + F + ERI+DD++ + F VGNDF+PH+P L I
Sbjct: 248 -----LLHLSLMREYIDYEFSVLKEKITFKYDIERIIDDWILMGFLVGNDFIPHLPHLHI 302
Query: 357 REGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQK--------R 408
A+ LL Y +GGY+ ++G + L R EK++ ++ ++ + F +
Sbjct: 303 NHDALPLLYGTYVTILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSEVFVDLKWFE 362
Query: 409 TRIQQAY-------------EYNEAMKLNARRES---------------SEELLQAPVAV 440
+++ Y Y E KL + S S++ L+
Sbjct: 363 SKVGNKYLNEAAGVAAEEARNYKEKKKLKGQENSLCWTALDKNEGEMITSKDNLEDETED 422
Query: 441 ADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWF 500
D + YK YY K + D D YV+ + W+ YYY V SW W+
Sbjct: 423 DDLFETEFRQYKRTYYMTKMGVDVVS--DDFLADQAACYVQAIQWILHYYYHGVQSWSWY 480
Query: 501 YPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSP 560
YPYHYAPF SD+ ++S L+I F LG+PF+PF+QL+ LPAAS + LP Y++LMT+ SP
Sbjct: 481 YPYHYAPFLSDIHNISTLKIHFELGKPFKPFEQLLAVLPAASKNLLPACYQHLMTNEDSP 540
Query: 561 IYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVM---- 616
I ++YPPDF+ D+NGK+ W+ VV +PFIDE+ LL + L +EE RN
Sbjct: 541 IIEYYPPDFKTDLNGKQQEWEAVVLIPFIDER-LLEAMETCNHSLKKEERKRNQHSECLM 599
Query: 617 ------LDLLYVHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVNAS 657
+ +Y P + I C Y + AW +D+N +
Sbjct: 600 CWYDRDTEFIYPSPWPEKFPAIERCCTRYKIISLD---AWRVDINKN 643
>gi|289577074|ref|NP_957327.2| 5'-3' exoribonuclease 1 [Danio rerio]
Length = 1697
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 265/704 (37%), Positives = 375/704 (53%), Gaps = 113/704 (16%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP FYRW+++RYP + +VV+E Q+ EFDNLYLDMNGII
Sbjct: 1 MGVPKFYRWISERYPC-LSEVVKEH-QIP------------------EFDNLYLDMNGII 40
Query: 61 HPCFHPDGKPAP--TSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C HP+ + S + +F IF Y++ +F +++PRK+ ++A+DGVAPRAKMNQQR R
Sbjct: 41 HQCSHPNDEDVHFRISEEKIFADIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RFR+AK+A EE+++K E+ G++L + + DSN ITPGT FMA L L+YF
Sbjct: 101 RFRSAKEA------EEKIKKALEK-GEVLPTEAR---FDSNCITPGTDFMARLQEQLKYF 150
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
+ +L+ WQ V LS PGEGEHKIM +IR + PG +PNTRHCLYGLDADLI
Sbjct: 151 VHNKLSTDKTWQGVNVYLSGHETPGEGEHKIMEFIRSESTKPGHNPNTRHCLYGLDADLI 210
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
ML L +HE HFS+LRE + G++ + + T
Sbjct: 211 MLGLTSHEPHFSLLREEVRFGGKKSQKRI---------------------------TAPE 243
Query: 299 KKKYQFLNIWVLREYLQYELD--IPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEI 356
+ + L++ ++REY+ YE F + ERI+DD+V + F VGNDF+PH+P L I
Sbjct: 244 ETTFHLLHLSLMREYIDYEFSELRKKISFEYDLERIIDDWVLMGFLVGNDFIPHLPHLHI 303
Query: 357 REGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQK--------R 408
A+ LL Y ++GGYL + G + L EK+++ ++ ++ + F +
Sbjct: 304 NHDALPLLYRTYINVLPSLGGYLNENGHLNLTHFEKYLEKLSDFDREHFSEVFVDLKWFE 363
Query: 409 TRIQQAY---------EYNEAMKLNARRESSEEL-LQAPVAVADTVKLG-------EPG- 450
+++ Y E + L + S + L L A V D+ E G
Sbjct: 364 SKVGNKYVNEAAGLAAEEADGRDLKKSKSSDDSLCLAALDGVRDSHSTAGRAEGAEEDGE 423
Query: 451 -----------YKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQW 499
YK YY K + D+ + YVEG+ W+ YYY V SW W
Sbjct: 424 DDDMFETEFRQYKRTYYMTKMGVEVVS--DEFLANQAKCYVEGIQWILHYYYHGVQSWSW 481
Query: 500 FYPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSS 559
+YPYHYAPF SD++++S L +TF L +PF PF+QL+ LP+AS LP+ Y++LMT SS
Sbjct: 482 YYPYHYAPFLSDVRNISGLSLTFDLAKPFMPFEQLLAVLPSASKDLLPQCYQHLMTSLSS 541
Query: 560 PIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVM--- 616
PI ++YP DF+ D+NGK+ W+ VV +PFIDEK LL + LT E RN
Sbjct: 542 PIVEYYPQDFKTDLNGKQQEWEAVVLIPFIDEKCLLAAMEPYTHNLTPSEKARNRHTECA 601
Query: 617 -------LDLLYVHPQHPLYQQITLYCQLYHQLPPQDRFAWEID 653
LD Y P ++ I ++C P D AW +
Sbjct: 602 VYCYDKDLDYPYNSPDPQIFPNI-VHCHARQTPVPMD--AWRVS 642
>gi|258563400|ref|XP_002582445.1| 5'-3' exoribonuclease 2 [Uncinocarpus reesii 1704]
gi|237907952|gb|EEP82353.1| 5'-3' exoribonuclease 2 [Uncinocarpus reesii 1704]
Length = 1028
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 226/440 (51%), Positives = 300/440 (68%), Gaps = 12/440 (2%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQ-VDGEGVARPVDVSKPNPNGMEFDNLYLDMNGI 59
MGVPA +RWL+ +YP I VVEE PQ +GE + PVD +KPNPNG E DNLYLDMNGI
Sbjct: 1 MGVPALFRWLSTKYPKIISAVVEELPQEFNGEEI--PVDTTKPNPNGEEMDNLYLDMNGI 58
Query: 60 IHPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRR 119
+HPC HP+GKP P++ ++ IF Y D + +VRPRKLL +A+DGVAPRAKMNQQR+RR
Sbjct: 59 VHPCTHPEGKPPPSNEGEMMLEIFKYTDRVVNMVRPRKLLMIAVDGVAPRAKMNQQRSRR 118
Query: 120 FRAAKDAAEAEAEEER----LRKEFEEAGKLLSAKE-KPETCDSNVITPGTQFMAVLSAA 174
FR+A++A EA+ ++ LRK+ G A+E +T DSNVITPGT FM +LSAA
Sbjct: 119 FRSAQEAKEADEKKAEFAKLLRKQNRGKGDTELAEEVVNKTWDSNVITPGTPFMDILSAA 178
Query: 175 LQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLD 234
L+Y++ +LN P W+ K+I+SDA VPGEGEHKIM +IR QR+ DPNTRH +YGLD
Sbjct: 179 LRYWVAYKLNTDPAWEKLKIIISDATVPGEGEHKIMEFIRSQRSCSEHDPNTRHVIYGLD 238
Query: 235 ADLIMLSLATHEIHFSILRE-VITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWN-GV 292
ADLIML L THE HF +LRE V + C +CGQ GH+A C GK + +++
Sbjct: 239 ADLIMLGLGTHEPHFRVLREDVFFQESKARTCRLCGQQGHVAEACTGKAKEKSGEFDEKQ 298
Query: 293 DDTPIHKKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMP 352
+P+ K + +L++ VLREYL E+ +PN PFP + ER +DD+VF+CFFVGNDFLPH+P
Sbjct: 299 KGSPL--KPFIWLHVSVLREYLAAEMFVPNQPFPFDLERALDDWVFMCFFVGNDFLPHLP 356
Query: 353 TLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQ 412
+LEIRE I+ L+ ++R MGGYLT G V L R + +Q +A ED IF++R + +
Sbjct: 357 SLEIRENGIDTLIAIWRDNIPLMGGYLTKDGHVDLKRAQLILQGLAKQEDAIFRRRRQTE 416
Query: 413 QAYEYNEAMKLNARRESSEE 432
+ N + R+ +EE
Sbjct: 417 ERRNANAKRRKEQERQRAEE 436
Score = 223 bits (568), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 117/246 (47%), Positives = 156/246 (63%), Gaps = 9/246 (3%)
Query: 442 DTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFY 501
D+V+L E GY +RYY KF + +P++I+ + V YVEGLCWV YY+Q SW W+Y
Sbjct: 575 DSVRLWEQGYADRYYEQKFNV-DPKDIE-FRHKVAKSYVEGLCWVLLYYFQGCPSWTWYY 632
Query: 502 PYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPI 561
PYHYAPFA+D DL ++I F G+PFRPF+QLMG LPAAS+ A+P+ +R+LM+DP+S I
Sbjct: 633 PYHYAPFAADFVDLDQMDIQFNKGKPFRPFEQLMGVLPAASNHAIPDIFRDLMSDPASEI 692
Query: 562 YKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLY 621
FYP DF ID+NGK+FAWQGV LPFIDEK LL K LTE E RN + D L+
Sbjct: 693 IDFYPEDFPIDLNGKKFAWQGVALLPFIDEKRLLAAMAKRYHRLTEAERARNEMGRDTLF 752
Query: 622 VHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVNASGGMNGYIWLCERNGLRSIIPSPVK 681
+ +HPLY+ I Q P ++++ S G+ G + ER+G S V
Sbjct: 753 ISDRHPLYKDIVANFYSKKQGVPN----LKLNMRVSEGLGGEV---ERDGAYIPHSSLVA 805
Query: 682 GLPDIE 687
+ D+E
Sbjct: 806 AINDVE 811
>gi|358055903|dbj|GAA98248.1| hypothetical protein E5Q_04931 [Mixia osmundae IAM 14324]
Length = 1271
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 218/449 (48%), Positives = 295/449 (65%), Gaps = 28/449 (6%)
Query: 1 MGVPAFYRWLADRYPLSIVDV-------------------------VEEDPQVDGEGVAR 35
MGVPA +RWL+ +YP + V E+DP GE V
Sbjct: 1 MGVPALFRWLSKKYPHIVTSVKEDLPTKAQPGASRLDPVTGQPLPGSEDDPDGGGEDVEI 60
Query: 36 PVDVSKPNPNGMEFDNLYLDMNGIIHPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRP 95
PVD+S PNPNG EFD LYLDMNGI+HPC HP+GKP P + D+ IF Y + + ++RP
Sbjct: 61 PVDMSLPNPNGEEFDCLYLDMNGIVHPCTHPEGKPPPETEADMMVEIFAYTERVVNMIRP 120
Query: 96 RKLLYLAIDGVAPRAKMNQQRTRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPET 155
RKLL +AIDGVAPRAKMNQQR+RRFRA+++A E+E +E+E GK +S + K +
Sbjct: 121 RKLLLIAIDGVAPRAKMNQQRSRRFRASQEAKTKAEEKEAAIREWEAMGKEVSDEYKDKK 180
Query: 156 C-DSNVITPGTQFMAVLSAALQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIR 214
D N ITPGT FM +L+A+L+Y++ ++LN PGW +V++SDA+VPGEGEHKIM YIR
Sbjct: 181 AWDQNAITPGTPFMDLLAASLRYWVASKLNSDPGWSKLQVVISDASVPGEGEHKIMDYIR 240
Query: 215 LQRNLPGFDPNTRHCLYGLDADLIMLSLATHEIHFSILRE-VITLPGQQEKCFVCGQVGH 273
QR+ G+DPNTRH +YGLDADLIMLSLATHE +F +LRE V + C CGQ GH
Sbjct: 241 RQRSHAGYDPNTRHVIYGLDADLIMLSLATHEPYFKVLREDVFAQDRKPRGCHRCGQPGH 300
Query: 274 LAAECHGKPGDNPADWNGVDDTPIHKKKYQFLNIWVLREYLQYELDIPNPPFPINFERIV 333
++ C G P + +++ + +K + FL++ VLREYL+ EL++P PFP + ER +
Sbjct: 301 HSSNCTGAPKEKQGEFDEKNKI-TERKPFIFLDVSVLREYLEIELNVPGVPFPFDLERAI 359
Query: 334 DDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKF 393
DD+VFL FFVGNDFLPH+P+LEIREGAI+ L+ ++R MG YLT G+V + +
Sbjct: 360 DDWVFLIFFVGNDFLPHLPSLEIREGAIDTLLAIWRTSLPQMGDYLTSHGKVNMKSAQFI 419
Query: 394 IQSVAVYEDQIFQKRTRIQQAYEYNEAMK 422
+ +A ED+IFQ+R ++ + NE +
Sbjct: 420 LDGLARREDEIFQRRRDAEERQDRNEKRR 448
Score = 209 bits (531), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 110/221 (49%), Positives = 136/221 (61%), Gaps = 7/221 (3%)
Query: 442 DTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFY 501
DTVKL EPGYKERYY KF + P E + +V Y+EGL WV YYYQ SWQWFY
Sbjct: 719 DTVKLWEPGYKERYYQQKFGV--PLEDKAFRDQIVKNYMEGLSWVLAYYYQGCPSWQWFY 776
Query: 502 PYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPI 561
P+H+APFASD DL L+I F LG PFRPF+QLMG PAAS +P + +LMT SPI
Sbjct: 777 PWHFAPFASDFTDLEKLDIQFELGAPFRPFEQLMGVFPAASRKHIPAPFHDLMTSEDSPI 836
Query: 562 YKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLY 621
FYP +F IDMNGK+ WQGV LPFID LL L+E+E RN + D+++
Sbjct: 837 IDFYPEEFMIDMNGKKMLWQGVALLPFIDSSRLLAALDLHYHELSEDEERRNGLGSDVVF 896
Query: 622 VHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVNASGGMNG 662
V+ H LY+ +T LY + P A+ D +S G+ G
Sbjct: 897 VNDNHGLYEALT---NLYGKKPSTIPVAF--DSKSSDGLAG 932
>gi|329664920|ref|NP_001192964.1| 5'-3' exoribonuclease 1 [Bos taurus]
gi|296491012|tpg|DAA33110.1| TPA: 5'-3' exoribonuclease 1 isoform 2 [Bos taurus]
Length = 1703
Score = 439 bits (1129), Expect = e-120, Method: Compositional matrix adjust.
Identities = 252/653 (38%), Positives = 363/653 (55%), Gaps = 100/653 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP FYRW+++RYP + +VV+E Q+ EFDNLYLDMNGII
Sbjct: 1 MGVPKFYRWISERYPC-LSEVVKEH-QIP------------------EFDNLYLDMNGII 40
Query: 61 HPCFHPDGKPAP--TSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C HP+ S D +F IF Y++ +F +++PRK+ ++A+DGVAPRAKMNQQR R
Sbjct: 41 HQCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RFR+AK+A EE+++K E+ G+ L A+ + DSN ITPGT+FMA L L+YF
Sbjct: 101 RFRSAKEA------EEKIKKAIEK-GETLPAEAR---FDSNCITPGTEFMARLHEHLKYF 150
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
+ +++ WQ + S PGEGEHKIM +IR ++ P DPNTRHCLYGLDADLI
Sbjct: 151 VNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLI 210
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
ML L +HE HFS+LRE + G++ + VC ++T H
Sbjct: 211 MLGLTSHEAHFSLLREEVRFGGKKTQ-RVCAP----------------------EETTFH 247
Query: 299 KKKYQFLNIWVLREYLQYELDI--PNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEI 356
L++ ++REY+ YE F + ERI+DD++ + F VGNDF+PH+P L I
Sbjct: 248 -----LLHLSLMREYIDYEFSALKDKITFKYDIERIIDDWILMGFLVGNDFIPHLPHLHI 302
Query: 357 REGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQK--------R 408
A+ LL Y +GGY+ ++G + L R EK++ ++ ++ + F +
Sbjct: 303 NHDALPLLYGTYITILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSEVFVDLKWFE 362
Query: 409 TRIQQAY----------------------EYNEAMKLNARRESSEELLQAPVAVADTVKL 446
+++ Y ++ A ++ EE++ + V + ++
Sbjct: 363 SKVGNKYLNEAAGVAAEEAKSYKEKKKSKGQENSICWAALDKNGEEVVTSKDNVEEEMED 422
Query: 447 GE------PGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWF 500
+ YK YY K + D D YV+ + W+ YYY V SW WF
Sbjct: 423 DDLFETEFRQYKRTYYMTKMGVDVVS--DDFLADQAACYVQAIQWILHYYYHGVQSWSWF 480
Query: 501 YPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSP 560
YPYHYAPF SD++++S L+I F LG+PF+PF+QL+ LPAAS + LP Y++LMT SP
Sbjct: 481 YPYHYAPFLSDIRNISTLKIHFELGKPFKPFEQLLAVLPAASKNLLPACYQHLMTSDDSP 540
Query: 561 IYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRN 613
I ++YPPDF+ D+NGK+ W+ VV +PFIDEK LL + L +EE RN
Sbjct: 541 IIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEERKRN 593
>gi|449673057|ref|XP_002169407.2| PREDICTED: LOW QUALITY PROTEIN: 5'-3' exoribonuclease 2-like [Hydra
magnipapillata]
Length = 999
Score = 439 bits (1129), Expect = e-120, Method: Compositional matrix adjust.
Identities = 232/432 (53%), Positives = 297/432 (68%), Gaps = 21/432 (4%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPAF+RWL+ +YPL +V VEE + + V PVD S PNPN EFDNLYLDMNGII
Sbjct: 1 MGVPAFFRWLSKKYPLIVVHCVEEKAK-ECNDVKVPVDTSLPNPNDYEFDNLYLDMNGII 59
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ KPAP + ++ +IF+YID IF +VRPR+LLY+AIDGVAPRAKMNQQR+RRF
Sbjct: 60 HPCSHPENKPAPKNETEMMLNIFEYIDRIFSIVRPRRLLYMAIDGVAPRAKMNQQRSRRF 119
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQ 180
RAAKDA E E E ERL + + + + N GT+FM L+ L+Y+I
Sbjct: 120 RAAKDARERERERERLLDDRFYXNRYV---------NKNFFKXGTEFMDRLAVCLRYYIA 170
Query: 181 ARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
RL PGW+ KVILSDAN PGEGEHKIM +IR QR P DPNT+HCL G DADLIML
Sbjct: 171 HRLTNDPGWKNIKVILSDANTPGEGEHKIMDFIRKQRAQPDHDPNTKHCLNGADADLIML 230
Query: 241 SLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIHKK 300
LATHE+HF+ILRE P Q+ C +CGQ+GH +C G P +N N V+ +
Sbjct: 231 GLATHEVHFTILREEFK-PNQKRPCEICGQIGHEKTDCEGLPKENLGS-NCVETPIVQDV 288
Query: 301 KYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGA 360
++ F+ + VLREYL+ EL + PF NFER +DD+VF+CFFVGNDFLPH+P+LEIREGA
Sbjct: 289 EFIFIRLHVLREYLERELKMEGLPF-YNFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 347
Query: 361 INLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYEYNEA 420
I+ L+++Y+R +GGYL D+G V L R ++ +Q V ED+IF+KR Q +E N
Sbjct: 348 IDRLVNIYKRCLPQLGGYLGDSGIVNLKRAQRILQEVGDVEDEIFRKR----QQFEEN-- 401
Query: 421 MKLNARRESSEE 432
+ AR++ ++E
Sbjct: 402 --MKARKKQNDE 411
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 99/193 (51%), Positives = 128/193 (66%), Gaps = 4/193 (2%)
Query: 441 ADTVKLGEPGYKERYYADKFEIS---NPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSW 497
D ++L E G+KERYY KF +S +P K +K +YV GLCWV RYYYQ CSW
Sbjct: 504 VDNIRLWEEGWKERYYLHKFSVSKEKDPVYFQKFRKHTANEYVIGLCWVLRYYYQGCCSW 563
Query: 498 QWFYPYHYAPFASDLKDLSDLEITFFLGE-PFRPFDQLMGTLPAASSSALPEKYRNLMTD 556
WFYP+HYAPFASD D+ DL++ F G PF+P +QLM PAAS LP +R+LM+
Sbjct: 564 NWFYPFHYAPFASDFGDIEDLDVKFEKGTVPFKPLEQLMSVFPAASGKFLPPTWRSLMSS 623
Query: 557 PSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVM 616
P SPI FYP DF+ID+NGK+FAWQGV LPF+DEK L R + LTE+E+ R+
Sbjct: 624 PDSPIIDFYPTDFKIDLNGKKFAWQGVALLPFVDEKRLHRTLVSVYNDLTEDEIRRSRRD 683
Query: 617 LDLLYVHPQHPLY 629
++L+V +PL+
Sbjct: 684 DEVLFVGKANPLF 696
>gi|425770113|gb|EKV08587.1| 5'-3' exoribonuclease 2 [Penicillium digitatum Pd1]
gi|425771660|gb|EKV10097.1| 5'-3' exoribonuclease 2 [Penicillium digitatum PHI26]
Length = 1036
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 220/446 (49%), Positives = 296/446 (66%), Gaps = 17/446 (3%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQV-DGEGVARPVDVSKPNPNGMEFDNLYLDMNGI 59
MGVPA +RWL+ +YP + V+EE QV DGE + P+D+++PNPNG E DNLYLDMNGI
Sbjct: 1 MGVPALFRWLSTKYPKIVSPVIEEQAQVVDGEEI--PIDITRPNPNGEEQDNLYLDMNGI 58
Query: 60 IHPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRR 119
+HPC HP+GKP P ++ I+ Y D + +VRPRKLL +AIDGVAPRAKMNQQR RR
Sbjct: 59 VHPCTHPEGKPPPADEQEMMMEIYKYTDRVVNMVRPRKLLMIAIDGVAPRAKMNQQRARR 118
Query: 120 FRAAKDAAEAEAEEERLRKEFEE------AGKLLSAKEKPETCDSNVITPGTQFMAVLSA 173
FRAA++A E + ++E L+K + +L+ + +T DSNVITPGT FM +L+A
Sbjct: 119 FRAAQEAKENDQKKEELQKMLAQQHVAKTGEQLVREEVVQKTWDSNVITPGTPFMDILAA 178
Query: 174 ALQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGL 233
+L+Y+I +LN PGW+ K+I+SDA VPGEGEHKIM+++R QR P DPNTRH +YGL
Sbjct: 179 SLRYWIAYKLNTDPGWENLKIIISDATVPGEGEHKIMNFVRSQRASPNHDPNTRHVIYGL 238
Query: 234 DADLIMLSLATHEIHFSILRE-VITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGV 292
DADLIML L THE +F +LRE V + C +CGQ GH A EC G+P + ++
Sbjct: 239 DADLIMLGLGTHEPYFRVLREDVFAQDSRPRGCRLCGQTGHKAEECLGRPKEKSGEF--- 295
Query: 293 DDTPIHK---KKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLP 349
D H K + +L++ VLREYL EL +P PFP + ER +DD+VF+CFFVGNDFLP
Sbjct: 296 -DEKQHAAPLKPFIWLHVAVLREYLAVELRVPQQPFPFDLERALDDWVFMCFFVGNDFLP 354
Query: 350 HMPTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRT 409
H+P+L+IRE I+ L+ ++R AMG YLT G V L + +Q +A ED IF +R
Sbjct: 355 HLPSLDIRENGIDTLIAIWRDNLPAMGSYLTKDGSVELKNAQIILQGLAKQEDAIFARRR 414
Query: 410 RIQQAYEYNEAMKLNARRESSEELLQ 435
+ + + NE + ++E Q
Sbjct: 415 QADERKQANEKRRKEQDAARNKERAQ 440
Score = 215 bits (547), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 114/256 (44%), Positives = 164/256 (64%), Gaps = 8/256 (3%)
Query: 439 AVADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQ 498
A DTVKL EPGY +RYY KF + +P++++ + V +Y GLCWV RYY+Q SW
Sbjct: 585 APEDTVKLWEPGYADRYYEQKFGV-DPKDLE-FRHQVAREYAIGLCWVLRYYFQGCPSWT 642
Query: 499 WFYPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPS 558
W+YP HYAPFA+D D++D+++ F G F+PF+QLMG LPAAS+ ALP+ + LM +P
Sbjct: 643 WYYPRHYAPFAADFVDIADMDVQFEKGTIFKPFEQLMGVLPAASNHALPKVFHPLMENPD 702
Query: 559 SPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLD 618
S I FYP DF +D+NGK+FAWQGV+ LPFIDE LL K+ LTE+E RNS +
Sbjct: 703 SEIIDFYPEDFPLDLNGKKFAWQGVILLPFIDETRLLNAMAKVYPLLTEDEKSRNSHGQE 762
Query: 619 LLYVHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVNASGGMNGYIWLCERNGLRSIIPS 678
+L + ++PLYQ L Y + P ++ + DV SGG+ G + E S + S
Sbjct: 763 VLLLSDRNPLYQD--LVANFYSKKPGPAQYPLKEDV--SGGLAGIVERSETYIPHSSLVS 818
Query: 679 PVK--GLPDIERNQAM 692
P++ G+P ++ ++++
Sbjct: 819 PLEAHGMPGVDDDRSL 834
>gi|358372009|dbj|GAA88615.1| 5'->3' exoribonculease Dhp1 [Aspergillus kawachii IFO 4308]
Length = 1045
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 225/449 (50%), Positives = 296/449 (65%), Gaps = 24/449 (5%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQ-VDGEGVARPVDVSKPNPNGMEFDNLYLDMNGI 59
MGVPA +RWL+++YP I V+EE PQ ++GE V PVD ++PNPNG E DNLYLDMNGI
Sbjct: 1 MGVPALFRWLSNKYPKIISPVIEEFPQEINGEEV--PVDTTRPNPNGDEMDNLYLDMNGI 58
Query: 60 IHPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRR 119
+HPC HP+GKP P++ ++ IF Y D + +VRPRKLL +A+DGVAPRAKMNQQR RR
Sbjct: 59 VHPCTHPEGKPPPSNEQEMMLEIFKYTDRVVNMVRPRKLLMIAVDGVAPRAKMNQQRARR 118
Query: 120 FRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPE-----TCDSNVITPGTQFMAVLSAA 174
FR+A++A EA+ ++E RK E ++ E T DSNVITPGT FM +L+AA
Sbjct: 119 FRSAQEAREADEKKEEFRKMLERQNGKKEDEDMQEQVIQKTWDSNVITPGTPFMDILAAA 178
Query: 175 LQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLD 234
L+Y+I +LN P W+ K+I+SDA VPGEGEHKIM ++R QR P DPNTRH +YGLD
Sbjct: 179 LRYWIAYKLNTDPAWEKLKIIISDATVPGEGEHKIMEFVRSQRASPEHDPNTRHVIYGLD 238
Query: 235 ADLIMLSLATHEIHFSILRE-VITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVD 293
ADLIML LATHE +F +LRE V + C +CGQ GH A EC G+ + ++
Sbjct: 239 ADLIMLGLATHEPYFRVLREDVFFQESRARTCRLCGQAGHKAEECKGQAKEKNGQFD-EK 297
Query: 294 DTPIHKKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPT 353
K + +LN+ +LREYL EL +P PFP + ER +DD+VF+CFFVGNDFLPH+P+
Sbjct: 298 GKGTSLKPFIWLNVSILREYLAAELYVPQQPFPFDLERALDDWVFMCFFVGNDFLPHLPS 357
Query: 354 LEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIF-------- 405
L+IRE I+ L+ ++R MGGYLT+ G V L R + +Q +A ED IF
Sbjct: 358 LDIRENGIDTLIAIWRDNIPVMGGYLTEDGHVDLKRAQLILQGLAKQEDAIFRRRRQAEE 417
Query: 406 ----QKRTRIQQAYEYNEAMKLNARRESS 430
++ R Q+A E + RR+SS
Sbjct: 418 RRAANEKRRKQEAQAREEGAR--KRRKSS 444
Score = 215 bits (548), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 112/236 (47%), Positives = 149/236 (63%), Gaps = 11/236 (4%)
Query: 442 DTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFY 501
DTV+L E GY +RYY KF + +PE+ + + V Y EGL WV RYY+Q SW W+Y
Sbjct: 590 DTVRLWEEGYADRYYEQKFGV-DPED-KEFRHKVARAYAEGLAWVLRYYFQGCPSWTWYY 647
Query: 502 PYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPI 561
PYHYAPFA+D D+ ++E+ F G PF+PF+QLMG LPA+S+ A+PE + +LM+DP S I
Sbjct: 648 PYHYAPFAADFVDIGEMELQFEKGTPFKPFEQLMGVLPASSNHAIPEVFHDLMSDPDSEI 707
Query: 562 YKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLY 621
FYP DF +D+NGK+FAWQGVV LPFIDEK LL +K L+++E RN V D+L
Sbjct: 708 IDFYPEDFPVDLNGKKFAWQGVVLLPFIDEKRLLAAMEKKYPLLSDDEKLRNCVGRDVLL 767
Query: 622 VHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVNASGGMNGYIWLCERNGLRSIIP 677
+ HPLY + Q P+ + I+ S G+ G + ERN S IP
Sbjct: 768 ISESHPLYHDLVANFYSKKQGAPK----YSINQRISEGLAGKV---ERN--ESYIP 814
>gi|119495190|ref|XP_001264385.1| 5'->3' exoribonculease Dhp1 [Neosartorya fischeri NRRL 181]
gi|119412547|gb|EAW22488.1| 5'->3' exoribonculease Dhp1 [Neosartorya fischeri NRRL 181]
Length = 1057
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 219/429 (51%), Positives = 294/429 (68%), Gaps = 10/429 (2%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDP-QVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGI 59
MGVPA +RWL+++YP I V+EE P +++GE V PVD +KPNPNG E DNLYLDMNGI
Sbjct: 1 MGVPALFRWLSNKYPKIISPVIEELPYEINGEEV--PVDTTKPNPNGEEMDNLYLDMNGI 58
Query: 60 IHPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRR 119
+HPC HP+GKP P + ++ IF Y D + +VRPRKLL +A+DGVAPRAKMNQQR RR
Sbjct: 59 VHPCTHPEGKPPPANEQEMMVEIFKYTDRVVNMVRPRKLLMIAVDGVAPRAKMNQQRARR 118
Query: 120 FRAAKDAAEAEAEEERLRKEF-EEAGKLLSAKEKPE----TCDSNVITPGTQFMAVLSAA 174
FR+A++A EA+ ++E RK ++ G + + + E T DSNVITPGT FM +L+A+
Sbjct: 119 FRSAQEAKEADEKKEEFRKMLAKQNGNKVDEELQEEVVKKTWDSNVITPGTPFMDILAAS 178
Query: 175 LQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLD 234
L+Y+I +LN P W+ K+I+SDA VPGEGEHKIM +IR QR P DPNTRH +YGLD
Sbjct: 179 LRYWIAYKLNTDPAWEKLKIIISDATVPGEGEHKIMEFIRSQRAAPEHDPNTRHVIYGLD 238
Query: 235 ADLIMLSLATHEIHFSILRE-VITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVD 293
ADLIML LATHE HF +LRE V + C +CGQ GH A EC G+ + +++
Sbjct: 239 ADLIMLGLATHEPHFRVLREDVFFQESRARTCHLCGQQGHKAEECRGQAKEKNGEFD-EK 297
Query: 294 DTPIHKKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPT 353
K + +L++ +LREYL EL +P FP + ER +DD+VF+CFFVGNDFLPH+P+
Sbjct: 298 QKGSSLKPFIWLHVSILREYLAAELYVPQQSFPFDLERALDDWVFMCFFVGNDFLPHLPS 357
Query: 354 LEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQ 413
L+IRE I+ L+ ++R MGGYLT+ G V L R + +Q +A ED IF++R + ++
Sbjct: 358 LDIRENGIDTLIAIWRDNIPVMGGYLTEDGHVDLKRAQLILQGLAKQEDAIFRRRRQAEE 417
Query: 414 AYEYNEAMK 422
NE +
Sbjct: 418 RKLANEKRR 426
Score = 219 bits (557), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 114/253 (45%), Positives = 162/253 (64%), Gaps = 8/253 (3%)
Query: 442 DTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFY 501
DTV+L E GY +RYY KF + +P++ + + V Y EGL WV YY+Q SW W+Y
Sbjct: 593 DTVRLWEEGYADRYYEQKFGV-DPQD-KEFRHKVARAYAEGLAWVLLYYFQGCPSWTWYY 650
Query: 502 PYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPI 561
PYHYAPFA+D D+ D+EI F G PF+PF+QLMG LPA+S+ A+PE + +LM++P S I
Sbjct: 651 PYHYAPFAADFVDIGDMEINFDKGVPFKPFEQLMGVLPASSNHAIPEVFHDLMSNPESEI 710
Query: 562 YKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLY 621
FYP DF +D+NGK+FAWQGV+ LPFIDEK LL +K LTE+E RNSV ++L
Sbjct: 711 IDFYPEDFAVDLNGKKFAWQGVILLPFIDEKRLLAAMEKKYPLLTEDEKLRNSVGREVLL 770
Query: 622 VHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVNASGGMNGYIWLCERNGLRSIIPSPVK 681
+ HPLYQ L Y + Q +++++ S G+ G + E S +PS ++
Sbjct: 771 LSEAHPLYQD--LVANFYSK--KQAVQKYKLNMRISDGLAGKVERNEAYIPHSSLPSSLE 826
Query: 682 --GLPDIERNQAM 692
G+P +E ++++
Sbjct: 827 EYGMPSLEDDRSL 839
>gi|440911813|gb|ELR61446.1| 5'-3' exoribonuclease 1 [Bos grunniens mutus]
Length = 1727
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 252/653 (38%), Positives = 363/653 (55%), Gaps = 100/653 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP FYRW+++RYP + +VV+E Q+ EFDNLYLDMNGII
Sbjct: 1 MGVPKFYRWISERYPC-LSEVVKEH-QIP------------------EFDNLYLDMNGII 40
Query: 61 HPCFHPDGKPAP--TSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C HP+ S D +F IF Y++ +F +++PRK+ ++A+DGVAPRAKMNQQR R
Sbjct: 41 HQCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RFR+AK+A EE+++K E+ G+ L A+ + DSN ITPGT+FMA L L+YF
Sbjct: 101 RFRSAKEA------EEKIKKAIEK-GETLPAEAR---FDSNCITPGTEFMARLHEHLKYF 150
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
+ +++ WQ + S PGEGEHKIM +IR ++ P DPNTRHCLYGLDADLI
Sbjct: 151 VNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLI 210
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
ML L +HE HFS+LRE + G++ + VC ++T H
Sbjct: 211 MLGLTSHEAHFSLLREEVRFGGKKTQ-RVCAP----------------------EETTFH 247
Query: 299 KKKYQFLNIWVLREYLQYELDI--PNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEI 356
L++ ++REY+ YE F + ERI+DD++ + F VGNDF+PH+P L I
Sbjct: 248 -----LLHLSLMREYIDYEFSALKDKITFKYDIERIIDDWILMGFLVGNDFIPHLPHLHI 302
Query: 357 REGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQK--------R 408
A+ LL Y +GGY+ ++G + L R EK++ ++ ++ + F +
Sbjct: 303 NHDALPLLYGTYITILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSEVFVDLKWFE 362
Query: 409 TRIQQAY----------------------EYNEAMKLNARRESSEELLQAPVAVADTVKL 446
+++ Y ++ A ++ EE++ + V + ++
Sbjct: 363 SKVGNKYLNEAAGVAAEEAKSYKEKKKSKGQENSICWAALDKNGEEVVTSKDNVEEEMED 422
Query: 447 GE------PGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWF 500
+ YK YY K + D D YV+ + W+ YYY V SW WF
Sbjct: 423 DDLFETEFRQYKRTYYMTKMGVDIVS--DDFLADQAACYVQAIQWILHYYYHGVQSWSWF 480
Query: 501 YPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSP 560
YPYHYAPF SD++++S L+I F LG+PF+PF+QL+ LPAAS + LP Y++LMT SP
Sbjct: 481 YPYHYAPFLSDIRNISTLKIHFELGKPFKPFEQLLAVLPAASKNLLPACYQHLMTSDDSP 540
Query: 561 IYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRN 613
I ++YPPDF+ D+NGK+ W+ VV +PFIDEK LL + L +EE RN
Sbjct: 541 IIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEERKRN 593
>gi|340375702|ref|XP_003386373.1| PREDICTED: 5'-3' exoribonuclease 2-like [Amphimedon queenslandica]
Length = 1066
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 227/430 (52%), Positives = 296/430 (68%), Gaps = 8/430 (1%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPAF+RWL+ +YP +V VEE + +G+ P+D + PNPN +EFDNLYLDMNGII
Sbjct: 1 MGVPAFFRWLSKKYPSIVVHCVEEK-RKKLQGIDVPIDATLPNPNEVEFDNLYLDMNGII 59
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ KPAP + D++ +IF+YID IF +VRPR+L+Y+AIDGVAPRAKMNQQR+RRF
Sbjct: 60 HPCCHPEDKPAPETEDEMMVAIFEYIDRIFNIVRPRRLVYMAIDGVAPRAKMNQQRSRRF 119
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETC--DSNVITPGTQFMAVLSAALQYF 178
R+AK++ + E +++R+E E G L KP++ DSN ITPGTQFMA L+ LQY+
Sbjct: 120 RSAKESVDKLEEIKKVRQELAERGVGLPPL-KPDSAHFDSNCITPGTQFMANLAICLQYY 178
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
I R+N P W+ KVILSDANVPGEGEHKIM YIR QR G DPNT HCLYG DADLI
Sbjct: 179 IHDRMNHNPAWKGLKVILSDANVPGEGEHKIMDYIRKQRASVGHDPNTHHCLYGADADLI 238
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
ML LATHE +F+ILRE P Q C +C Q GH EC G+ + +++ + I
Sbjct: 239 MLGLATHEPYFTILREDFK-PNQPRPCEICNQYGHSMTECTGEAREKKGEFDELATANIA 297
Query: 299 -KKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIR 357
+K++ F+ I VLREYLQ EL I F +FER +DD+VF+CFFVGNDFLPH+P+L+IR
Sbjct: 298 MEKEFIFIRINVLREYLQRELRIDGLDFKFDFERAIDDWVFMCFFVGNDFLPHLPSLQIR 357
Query: 358 EGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYEY 417
EGAI+ L+++Y++ + YLT+ G V + V+ + + ED+IF +R Q
Sbjct: 358 EGAIDRLINLYKKFLPSTKSYLTENGFVDVKNVQLILFELGKVEDEIFIRRR--DQDIRN 415
Query: 418 NEAMKLNARR 427
E K RR
Sbjct: 416 KERQKFKRRR 425
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 105/225 (46%), Positives = 140/225 (62%), Gaps = 6/225 (2%)
Query: 442 DTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFY 501
D V+L E G+KERYY KF +S+ +ID V++ VV Y EGLCWV YYYQ SW+W+Y
Sbjct: 554 DEVRLWEDGWKERYYQSKFCVSS-NDIDFVRQ-VVESYSEGLCWVMSYYYQGCPSWKWYY 611
Query: 502 PYHYAPFASDLKDLSDLEITFFLG-EPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSP 560
P+HYAPFASD + + D+ F G +PFRP +QLM PAAS+ LP ++ LM D S
Sbjct: 612 PFHYAPFASDFRYIRDVRDRFETGSKPFRPLEQLMSVFPAASAKFLPPSWQTLMLDDDSS 671
Query: 561 IYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLL 620
I FYP +F+ID+NGK+FAWQGV LPF+DE L + L L E RNS+ DL+
Sbjct: 672 IIDFYPTNFKIDLNGKKFAWQGVALLPFVDECRLHEALEPLYHMLDPLETVRNSLGNDLI 731
Query: 621 YVHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVNASGGMNGYIW 665
+VH LY LY + P + I+ ++SGG++G +W
Sbjct: 732 FVHKLSKLY---AFARTLYEETPGEKVGLVSINPDSSGGVSGSVW 773
>gi|344288974|ref|XP_003416221.1| PREDICTED: LOW QUALITY PROTEIN: 5'-3' exoribonuclease 1-like
[Loxodonta africana]
Length = 1706
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 251/652 (38%), Positives = 360/652 (55%), Gaps = 99/652 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP FYRW+++RYP + +VV+E Q+ EFDNLYLDMNGII
Sbjct: 1 MGVPKFYRWISERYPC-LSEVVKEH-QIP------------------EFDNLYLDMNGII 40
Query: 61 HPCFHPDGKPAP--TSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C HP+ S D +F IF Y++ +F +++PRK+ ++A+DGVAPRAKMNQQR R
Sbjct: 41 HQCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RFR+AK+A E++++K E+ G+ L + + DSN ITPGT+FMA L L+YF
Sbjct: 101 RFRSAKEA------EDKIKKAIEK-GETLPTEAR---FDSNCITPGTEFMARLHEHLKYF 150
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
+ +++ WQ + S PGEGEHKIM +IR ++ P DPNTRHCLYGLDADLI
Sbjct: 151 VNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLI 210
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
ML L +HE HFS+LRE + G++ + VC ++T H
Sbjct: 211 MLGLTSHEAHFSLLREEVRFGGKKTQ-RVCAP----------------------EETTFH 247
Query: 299 KKKYQFLNIWVLREYLQYELDI--PNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEI 356
L++ ++REY+ YE + F + ERI+DD++ + F VGNDF+PH+P L I
Sbjct: 248 -----LLHLSLMREYIDYEFSVLKDKIAFKYDIERIIDDWILMGFLVGNDFIPHLPHLHI 302
Query: 357 REGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQK--------R 408
A+ LL Y +GGY+ ++G + L R EK++ ++ ++ + F +
Sbjct: 303 NHDALPLLYGTYVHILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSEVFVDLKWFE 362
Query: 409 TRIQQAY-----------------------EYNEAMKLNARRES----SEELLQAPVAVA 441
+++ Y + N + ES S++ L+
Sbjct: 363 SKVGNKYLNEAAGVAAEEAKNYKEKKKSKGQENVCWAALDKNESDTATSKDNLEDETEDD 422
Query: 442 DTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFY 501
D + YK YY K + D D YV+ + W+ YYY V SW W+Y
Sbjct: 423 DLFETEFRQYKRTYYMTKMGVDVVS--DDFLADQAACYVQAIQWILHYYYHGVQSWSWYY 480
Query: 502 PYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPI 561
PYHYAPF SD++++S L+I F LG+PF+PF+QL+ LPAAS + LP Y++LMT SPI
Sbjct: 481 PYHYAPFLSDIRNISTLKIHFELGKPFKPFEQLLAVLPAASKNLLPTCYQHLMTSEDSPI 540
Query: 562 YKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRN 613
++YPPDF+ D+NGK+ W+ VV +PFIDEK LL + L +EE RN
Sbjct: 541 IEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMESCNHSLKKEERKRN 592
>gi|145240295|ref|XP_001392794.1| 5'-3' exoribonuclease 2 [Aspergillus niger CBS 513.88]
gi|134077309|emb|CAK45649.1| unnamed protein product [Aspergillus niger]
Length = 1045
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 225/449 (50%), Positives = 296/449 (65%), Gaps = 24/449 (5%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQ-VDGEGVARPVDVSKPNPNGMEFDNLYLDMNGI 59
MGVPA +RWL+++YP I V+EE PQ ++GE V PVD ++PNPNG E DNLYLDMNGI
Sbjct: 1 MGVPALFRWLSNKYPKIISPVIEEFPQEINGEEV--PVDTTRPNPNGDEMDNLYLDMNGI 58
Query: 60 IHPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRR 119
+HPC HP+GKP P + ++ IF Y D + +VRPRKLL +A+DGVAPRAKMNQQR RR
Sbjct: 59 VHPCTHPEGKPPPANEQEMMLEIFKYTDRVVNMVRPRKLLMIAVDGVAPRAKMNQQRARR 118
Query: 120 FRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPE-----TCDSNVITPGTQFMAVLSAA 174
FR+A++A EA+ ++E RK E+ ++ E T DSNVITPGT FM +L+AA
Sbjct: 119 FRSAQEAREADEKKEEFRKMLEKQNGKKEDEDMQEHVIQKTWDSNVITPGTPFMDILAAA 178
Query: 175 LQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLD 234
L+Y+I +LN P W+ K+I+SDA VPGEGEHKIM ++R QR P DPNTRH +YGLD
Sbjct: 179 LRYWIAYKLNTDPAWEKLKIIISDATVPGEGEHKIMEFVRSQRASPEHDPNTRHVIYGLD 238
Query: 235 ADLIMLSLATHEIHFSILRE-VITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVD 293
ADLIML LATHE +F +LRE V + C +CGQ GH A EC G+ + ++
Sbjct: 239 ADLIMLGLATHEPYFRVLREDVFFQESRARTCRLCGQAGHKAEECKGQAKEKNGQFD-EK 297
Query: 294 DTPIHKKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPT 353
K + +LN+ +LREYL EL +P PFP + ER +DD+VF+CFFVGNDFLPH+P+
Sbjct: 298 GKGTSLKPFIWLNVSILREYLAAELYVPQQPFPFDLERALDDWVFMCFFVGNDFLPHLPS 357
Query: 354 LEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIF-------- 405
L+IRE I+ L+ ++R MGGYLT+ G V L R + +Q +A ED IF
Sbjct: 358 LDIRENGIDTLIAIWRDNIPVMGGYLTEDGHVDLKRAQLILQGLAKQEDAIFRRRRQAEE 417
Query: 406 ----QKRTRIQQAYEYNEAMKLNARRESS 430
++ R Q+A E + RR+SS
Sbjct: 418 RRAANEKRRKQEAQAREEGAR--KRRKSS 444
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 110/229 (48%), Positives = 146/229 (63%), Gaps = 9/229 (3%)
Query: 442 DTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFY 501
DTV+L E GY +RYY KF + +PE+ + + V Y EGL WV RYY+Q SW W+Y
Sbjct: 590 DTVRLWEEGYADRYYEQKFGV-DPED-KEFRHKVARAYAEGLAWVLRYYFQGCPSWTWYY 647
Query: 502 PYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPI 561
PYHYAPFA+D D+ D+E+ F G PF+PF+QLMG LPA+S+ A+PE + +LM+DP S I
Sbjct: 648 PYHYAPFAADFVDIGDMELQFEKGTPFKPFEQLMGVLPASSNHAIPEVFHDLMSDPDSEI 707
Query: 562 YKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLY 621
FYP DF +D+NGK+FAWQGVV LPFIDEK LL +K L+++E RN V D+L
Sbjct: 708 IDFYPEDFPVDLNGKKFAWQGVVLLPFIDEKRLLAAMEKKYPLLSDDEKLRNCVGRDVLL 767
Query: 622 VHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVNASGGMNGYIWLCERN 670
+ HPLY + Q P+ + I+ S G+ G + ERN
Sbjct: 768 ISESHPLYHDLVANFYSKKQGAPK----YSINQRISEGLAGKV---ERN 809
>gi|380020587|ref|XP_003694164.1| PREDICTED: 5'-3' exoribonuclease 1-like [Apis florea]
Length = 1627
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 259/654 (39%), Positives = 360/654 (55%), Gaps = 102/654 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MG+P F+R++ +RYP + +D Q+ EFDNLYLD+NGII
Sbjct: 1 MGIPKFFRYINERYPCLTEKL--KDYQIP------------------EFDNLYLDLNGII 40
Query: 61 HPCFHPDGKPAP--TSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C HPD S + +FK+IF YI +F +++P+KL ++AIDGVAPRAK+NQQR+R
Sbjct: 41 HECSHPDDTDVTFRISEEIIFKNIFRYIQVLFCMIQPQKLFFIAIDGVAPRAKINQQRSR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RF+AAKDA EA+ + A + KEK DSN ITPGT FM+ L L+YF
Sbjct: 101 RFKAAKDAQIQEAKAK--------AKGINLPKEK--RFDSNCITPGTLFMSKLDEQLKYF 150
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
I +++ WQ KVILS + VPGEGEHKIM YIR + P +D NT+HCLYGLDADLI
Sbjct: 151 ITYKISTDKLWQKCKVILSGSQVPGEGEHKIMDYIRHMKAQPNYDVNTKHCLYGLDADLI 210
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
ML L THEIHF++LRE +T +Q K VC TP
Sbjct: 211 MLGLCTHEIHFTLLREELTFGKKQRK--VCL-------------------------TP-E 242
Query: 299 KKKYQFLNIWVLREYLQYELDI--PNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEI 356
+ K+ ++ +LREY+ +E PF + E+I+DD++ + F +GNDF+PH+P L I
Sbjct: 243 ETKFCLFHLSLLREYINHEFSSLKEKLPFSYDLEKIIDDWILMGFLIGNDFIPHLPNLHI 302
Query: 357 REGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQ------KRTR 410
GA+++L VY + GY+ +AG + LDR EKF++ ++ ++ F K
Sbjct: 303 IHGALSVLYQVYIDVMPTLDGYINEAGTLRLDRFEKFMERLSRFDILQFSEYYADLKYLE 362
Query: 411 IQQAYEYNEAMKLNARRESSEELLQAPVAVADT-----------VKLG----EPG----- 450
+ E KLN ++ S+EE +++P V D + LG E G
Sbjct: 363 SKTGRSLIETEKLNEKKSSNEE-IRSPKKVQDKEFDMLLRTAAEMSLGRYDDEDGGDDKS 421
Query: 451 -----------YKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQW 499
K+ YY +K + N +E + YV + W YYY CSW W
Sbjct: 422 DSEMYTMEFVQCKKDYYINKLKYENIDE--DFLRSQAEGYVRAIQWNLNYYYNGCCSWSW 479
Query: 500 FYPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSS 559
+YP+HYAP+ SD+KD DL++ F LGEPF PF+QL+ LP+ S LP ++ L+T+ S
Sbjct: 480 YYPHHYAPYISDIKDFKDLKLEFELGEPFLPFEQLLAVLPSYSKELLPSAFQTLLTEEQS 539
Query: 560 PIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRN 613
PI +YP +F+ D+NGK W+ VV +PFI+EK LL LT EE RN
Sbjct: 540 PIINYYPSEFETDLNGKEQEWEAVVLIPFINEKDLLDAMAPHYSKLTLEEQARN 593
>gi|291242576|ref|XP_002741181.1| PREDICTED: 5-3 exoribonuclease 2-like [Saccoglossus kowalevskii]
Length = 965
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 214/409 (52%), Positives = 284/409 (69%), Gaps = 3/409 (0%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPAF+RWL+ +YP +V VEE P+ + G+ PV++++PNPN +EFDNLYLDMNGII
Sbjct: 1 MGVPAFFRWLSKKYPSIVVHCVEEKPK-EVHGIQVPVNITEPNPNEIEFDNLYLDMNGII 59
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ KPAP + D++ +IF+ ID + +VRPR+LLY+AIDGVAPRAKMNQQR+RRF
Sbjct: 60 HPCCHPENKPAPKNEDEMMLAIFECIDRLMRIVRPRRLLYMAIDGVAPRAKMNQQRSRRF 119
Query: 121 RAAKDAAEAEAEEERLRKE-FEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFI 179
R K+ E + E +++++E G L K E DSN ITPGT+FM L+ L+Y++
Sbjct: 120 RGPKEVREKQVEIDKVKEEILSRGGTLPPPKPVSEKFDSNCITPGTEFMFRLADCLRYYV 179
Query: 180 QARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIM 239
R+ PGW KVILSDANVPGEGEHKIM YIR QR P DPNT HCL G DADLIM
Sbjct: 180 TERIMTDPGWSKVKVILSDANVPGEGEHKIMDYIRKQRGSPDHDPNTHHCLCGADADLIM 239
Query: 240 LSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIHK 299
L LATHE +F+I+RE P C +CGQ GH EC G + +++ + + +
Sbjct: 240 LGLATHEPYFTIIREEFK-PNAPRACELCGQYGHEMKECTGAAKEKEGEFDELTKPFVQE 298
Query: 300 KKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREG 359
+++ FL + +LREYL+ EL + PF +FER +DD+VF+CFFVGNDFLPH+P+L+IREG
Sbjct: 299 QEFIFLRLNILREYLEKELFMTGLPFTFDFERAIDDWVFMCFFVGNDFLPHLPSLQIREG 358
Query: 360 AINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKR 408
AI+ L+ +Y+ GGYLT G V L+RV+ + + ED IF+KR
Sbjct: 359 AIDRLIRIYKTAVFKTGGYLTKDGVVNLERVQMMMTDLGEMEDGIFKKR 407
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 106/228 (46%), Positives = 143/228 (62%), Gaps = 12/228 (5%)
Query: 444 VKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPY 503
++L E G+K+RYY KF++S E ++ + VV YVEGLCWV RYYYQ SW+W++P+
Sbjct: 519 IRLWEDGWKDRYYKLKFDVS--ENDEQFVQSVVSSYVEGLCWVLRYYYQGCPSWKWYFPF 576
Query: 504 HYAPFASDLKDLSDLEITFFLG-EPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIY 562
HYAPFA++ D+ L F G +PF+P +QLMG P+AS LPE +R LM+DP SPI
Sbjct: 577 HYAPFAANFIDIGKLPNDFEKGTKPFKPLEQLMGVFPSASGQFLPETWRKLMSDPDSPII 636
Query: 563 KFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYV 622
FYP DF ID+NGKR+AWQGV LPF+DEK L + LT EE+ RN + D L+V
Sbjct: 637 DFYPDDFAIDLNGKRYAWQGVALLPFVDEKRLKEALVGVYSDLTPEEIHRNGLGSDRLFV 696
Query: 623 HPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVNA--SGGMNGYIWLCE 668
+HP Y + +L F+ +D+N + GM+G IW E
Sbjct: 697 GKKHPAY-------DFFKELYDGGDFSEPVDMNPKLTEGMSGTIWADE 737
>gi|67516851|ref|XP_658311.1| hypothetical protein AN0707.2 [Aspergillus nidulans FGSC A4]
gi|74598763|sp|Q5BFH3.3|XRN2_EMENI RecName: Full=5'-3' exoribonuclease 2
gi|40746327|gb|EAA65483.1| hypothetical protein AN0707.2 [Aspergillus nidulans FGSC A4]
gi|259489019|tpe|CBF88946.1| TPA: 5'-3' exoribonuclease 2 (EC 3.1.13.-)
[Source:UniProtKB/Swiss-Prot;Acc:Q5BFH3] [Aspergillus
nidulans FGSC A4]
Length = 1032
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 218/438 (49%), Positives = 297/438 (67%), Gaps = 9/438 (2%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQ-VDGEGVARPVDVSKPNPNGMEFDNLYLDMNGI 59
MGVPA +RWL+ +YP I V+EE PQ V+GE + PVD++ PNPNG E DNLYLDMNGI
Sbjct: 1 MGVPALFRWLSKKYPKIISSVIEELPQEVNGEEI--PVDITGPNPNGEEMDNLYLDMNGI 58
Query: 60 IHPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRR 119
+HPC HP+GKP P + ++ IF Y D + +VRPRKLL +A+DGVAPRAKMNQQR RR
Sbjct: 59 VHPCTHPEGKPPPANEQEMMIEIFKYTDRVVNMVRPRKLLMIAVDGVAPRAKMNQQRARR 118
Query: 120 FRAAKDAAEAEAEEER----LRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAAL 175
FR+A++A E + +++ L K+ + ++L + +T DSNVITPGT FM +L+A+L
Sbjct: 119 FRSAQEAREQDEKKQEFQRMLAKQNGDKEQMLQEEVIQKTWDSNVITPGTPFMDILAASL 178
Query: 176 QYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDA 235
+Y+I +LN P W+ K+I+SDA VPGEGEHKIM +IR QR P DPN RH +YGLDA
Sbjct: 179 RYWIAYKLNTDPAWEKLKIIISDATVPGEGEHKIMEFIRSQRASPEHDPNARHVIYGLDA 238
Query: 236 DLIMLSLATHEIHFSILRE-VITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDD 294
DLIML LATHE HF +LRE V +Q C +CGQ GH A EC G+ + +++
Sbjct: 239 DLIMLGLATHEPHFRVLREDVFFQESKQRTCHLCGQPGHKAEECRGQAKEKNGEFDEKGK 298
Query: 295 TPIHKKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTL 354
K + +L++ +LREYL EL +P+ PFP + ER +DD+VF+CFFVGNDFLPH+P+L
Sbjct: 299 GAT-LKPFIWLHVSILREYLAAELYVPHQPFPFDLERALDDWVFMCFFVGNDFLPHLPSL 357
Query: 355 EIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQA 414
+IRE I+ L+ ++R MGGYLT G V L + + +Q +A ED IF++R + ++
Sbjct: 358 DIREDGIDTLIAIWRDNIPLMGGYLTQDGRVDLKKAQLILQGLAKQEDAIFRRRRQAEER 417
Query: 415 YEYNEAMKLNARRESSEE 432
NE + + +EE
Sbjct: 418 KLANEKRRKQEEKARNEE 435
Score = 215 bits (547), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 111/253 (43%), Positives = 161/253 (63%), Gaps = 8/253 (3%)
Query: 442 DTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFY 501
DTV+L E GY +RYY KF + +P++ + + V Y EGL WV YY+Q SW W+Y
Sbjct: 578 DTVRLWEEGYADRYYEQKFGV-DPQD-KEFRHKVARAYAEGLAWVLLYYFQGCPSWTWYY 635
Query: 502 PYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPI 561
PYHYAPFA+D D+ D+E++F G PF+P++QLMG LPA+S+ A+P+ + +LMT+P S I
Sbjct: 636 PYHYAPFAADFVDIGDMELSFEKGTPFKPYEQLMGVLPASSNHAIPKVFHSLMTEPDSEI 695
Query: 562 YKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLY 621
FYP DF +D+NGK+FAWQGVV LPFIDEK LL K LTE+E RN+V D+L
Sbjct: 696 IDFYPEDFPVDLNGKKFAWQGVVLLPFIDEKRLLAAMSKKYPLLTEDEKARNTVGRDVLL 755
Query: 622 VHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVNASGGMNGYIWLCERNGLRSIIPSPVK 681
+ HPLYQ + Q P+ +++++ S G+ G + E S + S ++
Sbjct: 756 LSESHPLYQDLVSNFYSKKQGAPK----YKLNMRVSDGLAGKVEKNEAYIPHSSLVSSLE 811
Query: 682 --GLPDIERNQAM 692
G+P +E ++++
Sbjct: 812 EYGMPSLEDDRSI 824
>gi|363737031|ref|XP_422596.3| PREDICTED: 5'-3' exoribonuclease 1 isoform 2 [Gallus gallus]
Length = 1736
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 254/660 (38%), Positives = 360/660 (54%), Gaps = 99/660 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP FYRW+++RYP + V ++ Q+ EFDNLYLDMNGII
Sbjct: 1 MGVPKFYRWISERYP--CLSQVLKEHQIP------------------EFDNLYLDMNGII 40
Query: 61 HPCFHPDGKPAP--TSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C HP+ S D +F IF Y++ +F +++PRK+ ++A+DGVAPRAKMNQQR R
Sbjct: 41 HQCSHPNDDDVHFRISEDKIFADIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RFR+AK+A E++++K E+ G++L + + DSN ITPGT+FMA L L+YF
Sbjct: 101 RFRSAKEA------EDKIKKALEK-GEILPTEAR---FDSNCITPGTEFMARLHEHLKYF 150
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
+ +++ WQ V LS PGEGEHKIM +IR ++ P DPNTRHCLYGLDADLI
Sbjct: 151 VNMKISTDKSWQGITVYLSGHETPGEGEHKIMEFIRSEKAKPHHDPNTRHCLYGLDADLI 210
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
ML L THE HF++LRE + G++ + C ++T H
Sbjct: 211 MLGLTTHEAHFALLREEVRFGGKKSQ-RACAP----------------------EETTFH 247
Query: 299 KKKYQFLNIWVLREYLQYELD--IPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEI 356
L++ ++REY+ YE F + E+I+DD++ + F VGNDF+PH+P L I
Sbjct: 248 -----LLHLSLMREYIDYEFSPVKDKISFDYDIEKIIDDWILMGFLVGNDFIPHLPHLHI 302
Query: 357 REGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQK--------R 408
A+ LL Y +GGY+ + G + L R EK++ ++ ++ + F +
Sbjct: 303 NHDALPLLYRTYMAILPELGGYINENGHLNLKRFEKYLTRLSDFDREHFSEVFVDLKWFE 362
Query: 409 TRIQQAY------------EYNEAMKLNARRES----SEELLQAPVAVADTVKLGEP--- 449
+++ Y N+ K A+ S + E + V + TV EP
Sbjct: 363 SKVGNKYLNEAAGIAAEEARNNKQKKRKAQENSLCLAALEKNEDEVVTSKTVLEDEPEDD 422
Query: 450 --------GYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFY 501
YK YY K I D D YV+ + W+ YYY V SW W+Y
Sbjct: 423 DLFETEFRQYKRTYYMTKMGIEVVS--DDFLADQAECYVQAIQWILHYYYHGVQSWSWYY 480
Query: 502 PYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPI 561
PYHYAP+ SD++++S+L+I F LG+PF PF+QL+ LPAAS LP Y++LM SPI
Sbjct: 481 PYHYAPYLSDIRNISELKIQFELGKPFMPFEQLLAVLPAASKDLLPRCYQHLMVSQDSPI 540
Query: 562 YKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLY 621
++YP DF+ D+NGK+ W+ VV +PFIDEK LL + L EEE RN L+Y
Sbjct: 541 IEYYPLDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMESCNKCLKEEEKRRNVHSACLMY 600
>gi|350591614|ref|XP_003483306.1| PREDICTED: 5'-3' exoribonuclease 1 [Sus scrofa]
Length = 1704
Score = 437 bits (1124), Expect = e-120, Method: Compositional matrix adjust.
Identities = 250/653 (38%), Positives = 361/653 (55%), Gaps = 100/653 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP FYRW+++RYP + +VV+E Q+ EFDNLYLDMNGII
Sbjct: 1 MGVPKFYRWISERYPC-LSEVVKEH-QIP------------------EFDNLYLDMNGII 40
Query: 61 HPCFHPDGKPAP--TSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C HP+ S D +F IF Y++ +F +++PRK+ ++A+DGVAPRAKMNQQR R
Sbjct: 41 HQCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RFR+AK+A E++++K E+ G+ L + + DSN ITPGT+FMA L L+YF
Sbjct: 101 RFRSAKEA------EDKIKKAIEK-GETLPTEAR---FDSNCITPGTEFMARLHEHLKYF 150
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
+ +++ WQ + S PGEGEHKIM +IR ++ P DPNTRHCLYGLDADLI
Sbjct: 151 VNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLI 210
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
ML L +HE HFS+LRE + G++ + VC ++T H
Sbjct: 211 MLGLTSHEAHFSLLREEVRFGGKKTQ-RVCAP----------------------EETTFH 247
Query: 299 KKKYQFLNIWVLREYLQYELDI--PNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEI 356
L++ ++REY+ YE F + ERI+DD++ + F VGNDF+PH+P L I
Sbjct: 248 -----LLHLSLMREYIDYEFSALKDKITFKYDIERIIDDWILMGFLVGNDFIPHLPHLHI 302
Query: 357 REGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQK--------R 408
A+ LL Y +GGY+ ++G + L R EK++ ++ ++ + F +
Sbjct: 303 NHDALPLLYGTYITILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSEVFVDLKWFE 362
Query: 409 TRIQQAY----------------------EYNEAMKLNARRESSEELLQAPVAVADTVKL 446
+++ Y ++ A ++ EE++ + + D +
Sbjct: 363 SKVGNKYLNEAAGVAAEEAKNYKEKKKTKGQENSVCWAALDKNGEEVVTSKDNLEDETED 422
Query: 447 GE------PGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWF 500
+ YK YY K + D D YV+ + W+ YYY V SW WF
Sbjct: 423 DDLFETEFRQYKRTYYMTKMGVDVVS--DDFLADQAACYVQAIQWILHYYYHGVQSWSWF 480
Query: 501 YPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSP 560
YPYHYAPF SD++++S L+I F LG+PF+PF+QL+ LPAAS + LP Y++LMT SP
Sbjct: 481 YPYHYAPFLSDIRNISTLKIHFELGKPFKPFEQLLAVLPAASKNLLPTCYQHLMTSEDSP 540
Query: 561 IYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRN 613
I ++YPPDF+ D+NGK+ W+ VV +PFIDEK LL + L +EE RN
Sbjct: 541 IIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEERKRN 593
>gi|426219417|ref|XP_004003922.1| PREDICTED: 5'-3' exoribonuclease 1 [Ovis aries]
Length = 1702
Score = 437 bits (1124), Expect = e-119, Method: Compositional matrix adjust.
Identities = 253/653 (38%), Positives = 362/653 (55%), Gaps = 100/653 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP FYRW+++RYP + +VV+E Q+ EFDNLYLDMNGII
Sbjct: 1 MGVPKFYRWISERYPC-LSEVVKEH-QIP------------------EFDNLYLDMNGII 40
Query: 61 HPCFHPDGKPAP--TSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C HP+ S D +F IF Y++ +F +++PRK+ ++A+DGVAPRAKMNQQR R
Sbjct: 41 HQCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RFR+AK+A E++++K E+ G+ L A+ + DSN ITPGT+FMA L L+YF
Sbjct: 101 RFRSAKEA------EDKIKKAIEK-GETLPAEAR---FDSNCITPGTEFMARLHEHLKYF 150
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
+ +++ WQ + S PGEGEHKIM +IR ++ P DPNTRHCLYGLDADLI
Sbjct: 151 VNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLI 210
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
ML L +HE HFS+LRE + G++ + VC ++T H
Sbjct: 211 MLGLTSHEAHFSLLREEVRFGGKKTQ-RVCAP----------------------EETTFH 247
Query: 299 KKKYQFLNIWVLREYLQYELDI--PNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEI 356
L++ ++REY+ YE F + ERI+DD++ + F VGNDF+PH+P L I
Sbjct: 248 -----LLHLSLMREYIDYEFSALKDKITFKYDIERIIDDWILMGFLVGNDFIPHLPHLHI 302
Query: 357 REGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQK--------R 408
A+ LL Y +GGY+ ++G + L R EK++ ++ ++ + F +
Sbjct: 303 NHDALPLLYGTYITILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSEVFVDLKWFE 362
Query: 409 TRIQQAY-----------------------EYNE----AMKLNARRE-SSEELLQAPVAV 440
+++ Y + N A+ N +S++ L+ +
Sbjct: 363 SKVGNKYLNEAAGVAAEEAKNYKEKKKSKGQENSICWAALDKNGEEVVTSKDNLEEEMED 422
Query: 441 ADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWF 500
D + YK YY K + D D YV+ + W+ YYY V SW WF
Sbjct: 423 DDLFETEFRQYKRTYYMTKMGVDVVS--DDFLADQAACYVQAIQWILHYYYHGVQSWSWF 480
Query: 501 YPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSP 560
YPYHYAPF SD++++S L+I F LG+PF+PF+QL+ LPAAS + LP Y++LMT SP
Sbjct: 481 YPYHYAPFLSDIRNISTLKIHFELGKPFKPFEQLLAVLPAASKNLLPACYQHLMTSDDSP 540
Query: 561 IYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRN 613
I ++YPPDF+ D+NGK+ W+ VV +PFIDEK LL + L +EE RN
Sbjct: 541 IIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEERKRN 593
>gi|406861589|gb|EKD14643.1| 5'->3' exoribonculease Dhp1 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 988
Score = 437 bits (1124), Expect = e-119, Method: Compositional matrix adjust.
Identities = 214/418 (51%), Positives = 287/418 (68%), Gaps = 5/418 (1%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDP-QVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGI 59
MGVPA +RWL+ +YP I +V+EE P ++DG+ + P+D PNPNG EFDNLYLDMNGI
Sbjct: 1 MGVPALFRWLSQKYPKIISNVIEEQPREIDGQEI--PIDTRGPNPNGEEFDNLYLDMNGI 58
Query: 60 IHPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRR 119
+HPC HP+ +PAP +++ +IF Y D + +VRPRKLL +AIDGVAPRAKMNQQR+RR
Sbjct: 59 VHPCSHPEDRPAPKDEEEMMLAIFKYTDRVVNMVRPRKLLLIAIDGVAPRAKMNQQRSRR 118
Query: 120 FRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFI 179
FR+A++A E EA++ L K + G + E + DSN ITPGT FM +L+A+L+Y+I
Sbjct: 119 FRSAQEAQEKEADKAELLKMLKSQGGHIEEPEIKKAWDSNEITPGTPFMDILAASLRYWI 178
Query: 180 QARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIM 239
+LN P W KVI+SD+ VPGEGEHKIM +IR QR+ P DPNTRH +YGLDADLIM
Sbjct: 179 AYKLNTDPAWAKMKVIISDSTVPGEGEHKIMEFIRSQRSSPHHDPNTRHVIYGLDADLIM 238
Query: 240 LSLATHEIHFSILREVITLPGQQEK-CFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
L L THE HF +LRE + + + C +CGQ GH A EC GK +++ P
Sbjct: 239 LGLGTHEPHFRVLREDVFAQERGPRLCRLCGQAGHEARECTGKAKVKDGEFDEKASAPA- 297
Query: 299 KKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIRE 358
K + +L++ VLREYL EL +P+ P+ + ER +DD+VF+CFFVGNDFLPH+P+LEIRE
Sbjct: 298 LKPFIWLHVSVLREYLAAELYVPDQPYRFDLERAIDDWVFMCFFVGNDFLPHLPSLEIRE 357
Query: 359 GAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYE 416
I+ L+ ++R MGGYLT G V L+R + + +A ED IF++R + + E
Sbjct: 358 NGIDTLIAIWRDNIPHMGGYLTKDGHVDLERAQFILDGLAKQEDAIFRRRKQTEDRRE 415
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 106/223 (47%), Positives = 136/223 (60%), Gaps = 7/223 (3%)
Query: 443 TVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYP 502
TV+L + GY +RYY KF ++P +I + V YVEGL WV YY+Q SW+W+YP
Sbjct: 566 TVRLWDEGYADRYYEQKFG-ADPSDI-AFRHKVAKAYVEGLAWVLLYYFQGCPSWEWYYP 623
Query: 503 YHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIY 562
YHYAPFA+D +LSD++I+F G FRPF+QLMG LPAAS A+PE + +LMTDP S I
Sbjct: 624 YHYAPFAADFANLSDIKISFEKGRIFRPFEQLMGVLPAASRQAIPETFHDLMTDPESEII 683
Query: 563 KFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYV 622
FYP DF +D+NGK+FAWQGV LPFID LL K L E RN V D+L V
Sbjct: 684 DFYPEDFVVDLNGKKFAWQGVALLPFIDSDRLLSAMAKKYPMLPPEVAARNGVGKDVLLV 743
Query: 623 HPQH-PLYQQITLYCQLYHQLPPQDRFAWEIDVNASGGMNGYI 664
H LY I Q PP ++++ + S G+ G +
Sbjct: 744 AEAHESLYADIATNFYSKKQGPPH----FKLNPSTSEGLTGKV 782
>gi|350591616|ref|XP_003132505.3| PREDICTED: 5'-3' exoribonuclease 1 isoform 1 [Sus scrofa]
Length = 1691
Score = 437 bits (1123), Expect = e-119, Method: Compositional matrix adjust.
Identities = 250/653 (38%), Positives = 361/653 (55%), Gaps = 100/653 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP FYRW+++RYP + +VV+E Q+ EFDNLYLDMNGII
Sbjct: 1 MGVPKFYRWISERYPC-LSEVVKEH-QIP------------------EFDNLYLDMNGII 40
Query: 61 HPCFHPDGKPAP--TSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C HP+ S D +F IF Y++ +F +++PRK+ ++A+DGVAPRAKMNQQR R
Sbjct: 41 HQCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RFR+AK+A E++++K E+ G+ L + + DSN ITPGT+FMA L L+YF
Sbjct: 101 RFRSAKEA------EDKIKKAIEK-GETLPTEAR---FDSNCITPGTEFMARLHEHLKYF 150
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
+ +++ WQ + S PGEGEHKIM +IR ++ P DPNTRHCLYGLDADLI
Sbjct: 151 VNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLI 210
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
ML L +HE HFS+LRE + G++ + VC ++T H
Sbjct: 211 MLGLTSHEAHFSLLREEVRFGGKKTQ-RVCAP----------------------EETTFH 247
Query: 299 KKKYQFLNIWVLREYLQYELDI--PNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEI 356
L++ ++REY+ YE F + ERI+DD++ + F VGNDF+PH+P L I
Sbjct: 248 -----LLHLSLMREYIDYEFSALKDKITFKYDIERIIDDWILMGFLVGNDFIPHLPHLHI 302
Query: 357 REGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQK--------R 408
A+ LL Y +GGY+ ++G + L R EK++ ++ ++ + F +
Sbjct: 303 NHDALPLLYGTYITILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSEVFVDLKWFE 362
Query: 409 TRIQQAY----------------------EYNEAMKLNARRESSEELLQAPVAVADTVKL 446
+++ Y ++ A ++ EE++ + + D +
Sbjct: 363 SKVGNKYLNEAAGVAAEEAKNYKEKKKTKGQENSVCWAALDKNGEEVVTSKDNLEDETED 422
Query: 447 GE------PGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWF 500
+ YK YY K + D D YV+ + W+ YYY V SW WF
Sbjct: 423 DDLFETEFRQYKRTYYMTKMGVDVVS--DDFLADQAACYVQAIQWILHYYYHGVQSWSWF 480
Query: 501 YPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSP 560
YPYHYAPF SD++++S L+I F LG+PF+PF+QL+ LPAAS + LP Y++LMT SP
Sbjct: 481 YPYHYAPFLSDIRNISTLKIHFELGKPFKPFEQLLAVLPAASKNLLPTCYQHLMTSEDSP 540
Query: 561 IYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRN 613
I ++YPPDF+ D+NGK+ W+ VV +PFIDEK LL + L +EE RN
Sbjct: 541 IIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEERKRN 593
>gi|145347709|ref|XP_001418304.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578533|gb|ABO96597.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 802
Score = 437 bits (1123), Expect = e-119, Method: Compositional matrix adjust.
Identities = 230/411 (55%), Positives = 293/411 (71%), Gaps = 18/411 (4%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP+FYRW+A +YP + DVVE++P VD G ++ ++ NPNG+EFDNLYLDMNGII
Sbjct: 1 MGVPSFYRWIAQKYPKIVADVVEDEP-VDALGRRVELNSAEANPNGIEFDNLYLDMNGII 59
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPCFHP+ +PAPT+ ++VF+ IFDYID +FL++RPRK+LY+AIDGVAPRAKMNQQR+RRF
Sbjct: 60 HPCFHPEDRPAPTTEEEVFECIFDYIDRLFLMIRPRKVLYMAIDGVAPRAKMNQQRSRRF 119
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQ 180
R+A++A E EEE+LR++ G + K++ DSNVITPGT FM LS AL+Y++
Sbjct: 120 RSAQEAREKAEEEEKLREKLIREGVKVQPKQESGVFDSNVITPGTPFMGRLSEALKYYVH 179
Query: 181 ARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
+LN PGW+ +VI SDA+VPGEGEHK M YIR QR LPG +PNTRH +YGLDADLIML
Sbjct: 180 DKLNNDPGWRGIEVIFSDASVPGEGEHKAMHYIRQQRGLPGANPNTRHVVYGLDADLIML 239
Query: 241 SLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIHKK 300
+LATHE HF ILRE++ Q+K Q L E K I +K
Sbjct: 240 ALATHEPHFWILREIVF----QKKDNEAPQTLGLGTEETKK------------KVAIARK 283
Query: 301 KYQFLNIWVLREYLQYELDIPNP-PFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREG 359
YQ L++ VLREYL ++ P PF ++ ER+ DDF+F+CFFVGNDFLPH PTLEIREG
Sbjct: 284 PYQLLSVSVLREYLALDMRPVAPTPFKLDPERMFDDFIFMCFFVGNDFLPHSPTLEIREG 343
Query: 360 AINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTR 410
AI+LLM +YR +GGYL G L VEKF++ V+ +ED IFQKR +
Sbjct: 344 AIDLLMTLYRNCLPTLGGYLCADGRPNLSIVEKFVRLVSEHEDAIFQKRAK 394
Score = 245 bits (625), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 124/276 (44%), Positives = 171/276 (61%), Gaps = 6/276 (2%)
Query: 419 EAMKLNARR--ESSEELLQAPVAVADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVV 476
E +K +R E++ + + D ++LGE G+K+RYY K + + P+ D++ + +V
Sbjct: 479 ERLKTRGKRAAEATADAMGEREEETDNIRLGESGWKDRYYEAKMQ-ATPQTRDEIIRGMV 537
Query: 477 LKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMG 536
++YV GL WVCRYY++ CSW WFYPYHYAPFASDL DLS + F LG+PF+PF QLMG
Sbjct: 538 IEYVRGLIWVCRYYFEGCCSWSWFYPYHYAPFASDLYDLSTISTDFDLGKPFKPFSQLMG 597
Query: 537 TLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLR 596
LPAASS ALP + LM+D SPI FYP DF +DMNGKRF WQ V LP+ID LL
Sbjct: 598 VLPAASSHALPAAFAPLMSDKDSPIIDFYPEDFALDMNGKRFTWQAVALLPWIDANRLLE 657
Query: 597 QTKKLEVFLTEEELFRNSVMLDLLYVHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVNA 656
QT+ LE LT EE RNS+ + +YV+ HPL +Q + + + ++D
Sbjct: 658 QTEMLEYTLTAEEKRRNSINEEEIYVNAAHPLAKQFLELEEREDEDVEK---TLKMDPKL 714
Query: 657 SGGMNGYIWLCERNGLRSIIPSPVKGLPDIERNQAM 692
S GMN + +R+ ++IPSP+ DI N+ +
Sbjct: 715 SKGMNATLVSVKRDAQPTMIPSPMSSRQDISNNKVV 750
>gi|431899770|gb|ELK07717.1| 5'-3' exoribonuclease 1 [Pteropus alecto]
Length = 1742
Score = 436 bits (1122), Expect = e-119, Method: Compositional matrix adjust.
Identities = 251/652 (38%), Positives = 361/652 (55%), Gaps = 99/652 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP FYRW+++RYP + +VV+E Q+ EFDNLYLDMNGII
Sbjct: 1 MGVPKFYRWISERYPC-LSEVVKEH-QIP------------------EFDNLYLDMNGII 40
Query: 61 HPCFHPDGKPAP--TSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C HP+ S D +F IF Y++ +F +++PRK+ ++A+DGVAPRAKMNQQR R
Sbjct: 41 HQCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RFR+AK+A E++++K E+ G+ L + + DSN ITPGT+FMA L L+YF
Sbjct: 101 RFRSAKEA------EDKIKKAVEK-GETLPTEAR---FDSNCITPGTEFMARLHEHLKYF 150
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
+ +++ WQ + S PGEGEHKIM +IR ++ P DPNTRHCLYGLDADLI
Sbjct: 151 VNLKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLI 210
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
ML L +HE FS+LRE + G++ + VC ++T H
Sbjct: 211 MLGLTSHEAQFSLLREEVRFGGKKTQ-RVCAP----------------------EETTFH 247
Query: 299 KKKYQFLNIWVLREYLQYELDI--PNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEI 356
L++ ++REY+ YE + F + ERI+DD++ + F VGNDF+PH+P L I
Sbjct: 248 -----LLHLSLMREYIDYEFSVLKDKITFQYDIERIIDDWILMGFLVGNDFIPHLPHLHI 302
Query: 357 REGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQK--------R 408
A+ LL Y +GGY+ ++G + L R EK++ ++ ++ + F +
Sbjct: 303 NHDALPLLYGTYITILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSEVFVDLKWFE 362
Query: 409 TRIQQAY-----------------------EYNE----AMKLNARRESSEELLQAPVAVA 441
+++ Y + N A+ NA+ +S++ L+
Sbjct: 363 SKVGNKYLNEAAGVAAEEAKNYKEKKKSKVQENSICWAALDKNAQVVTSKDNLEDETEDD 422
Query: 442 DTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFY 501
D + YK YY K + D D YV+ + W+ YYY V SW W+Y
Sbjct: 423 DLFETEFRQYKRTYYMTKMGVDVVS--DDFLADQAACYVQAIQWILHYYYHGVQSWSWYY 480
Query: 502 PYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPI 561
PYHYAPF SD++++S L+I F LG+PF+PF+QL+ LPAAS + LP Y++LMT SPI
Sbjct: 481 PYHYAPFLSDIRNISTLKIHFELGKPFKPFEQLLAVLPAASKNLLPTCYQHLMTREDSPI 540
Query: 562 YKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRN 613
++YPPDF+ D+NGK+ W+ VV +PFIDEK LL + L EE RN
Sbjct: 541 IEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKTEERKRN 592
>gi|116204849|ref|XP_001228235.1| hypothetical protein CHGG_10308 [Chaetomium globosum CBS 148.51]
gi|115311955|sp|Q2GNZ6.3|XRN2_CHAGB RecName: Full=5'-3' exoribonuclease 2
gi|88176436|gb|EAQ83904.1| hypothetical protein CHGG_10308 [Chaetomium globosum CBS 148.51]
Length = 1039
Score = 436 bits (1122), Expect = e-119, Method: Compositional matrix adjust.
Identities = 220/425 (51%), Positives = 290/425 (68%), Gaps = 12/425 (2%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MG+PA +RWL+ +YP I VVEE V +G PVD ++PNPNG EFDNLYLDMNGI+
Sbjct: 1 MGIPAAFRWLSTKYPKIISPVVEEKALVMEDGTVVPVDATQPNPNGEEFDNLYLDMNGIV 60
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAI-DGVAPRAKMNQQRTRR 119
HPC HP+ +PAP+ +++ +F Y + + +VRPRKLL +A+ DGVAPRAKMNQQR+RR
Sbjct: 61 HPCSHPEDRPAPSDEEEMMVEVFKYTERVVNMVRPRKLLMIAVADGVAPRAKMNQQRSRR 120
Query: 120 FRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKP-ETC-----DSNVITPGTQFMAVLSA 173
FRAA+DA E E ++++L K ++ K +AKE+P ET DSN ITPGT FM +L+A
Sbjct: 121 FRAAQDAKEKEEDKQQLLKMLQKE-KGSTAKEEPIETVVKKAFDSNSITPGTPFMDILAA 179
Query: 174 ALQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGL 233
+L+Y+ +LN P W KVI+SDA VPGEGEHKIM ++R QRN P DPNTRH +YGL
Sbjct: 180 SLRYWCAYKLNTDPAWAKMKVIISDATVPGEGEHKIMEFVRSQRNSPEHDPNTRHVIYGL 239
Query: 234 DADLIMLSLATHEIHFSILRE-VITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGV 292
DADLIML LATHE HF +LRE V G+ C +CGQ GH C G+ + +++
Sbjct: 240 DADLIMLGLATHEPHFRVLREDVFFQQGKARMCKLCGQKGHDERNCRGEAKEKAGEFDEK 299
Query: 293 DDT-PIHKKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHM 351
D P+ K + +L++ +LREYL EL+IPN PF + ER +DD+VF+CFFVGNDFLPH+
Sbjct: 300 DKAEPL--KPFIWLHVSILREYLAIELNIPNLPFRWDLERAIDDWVFMCFFVGNDFLPHL 357
Query: 352 PTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRI 411
P LEIRE I LM +++ MGGY+T G V LDR + + +A ED IF++R
Sbjct: 358 PALEIRENGIETLMAIWKDNLPVMGGYVTKDGHVDLDRAQYILSGLAKQEDSIFRRRKET 417
Query: 412 QQAYE 416
+ E
Sbjct: 418 EDRRE 422
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 105/254 (41%), Positives = 153/254 (60%), Gaps = 9/254 (3%)
Query: 442 DTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFY 501
DTV+L E GY +RYY KF++ + ++I + V YVEGL WV YY+Q SW+WFY
Sbjct: 568 DTVRLWEEGYADRYYEQKFKV-DAKDI-AFRHKVARAYVEGLAWVLMYYFQGCPSWEWFY 625
Query: 502 PYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPI 561
PYHYAPFA+D DL ++I+F G RPF+QLM LPAAS A+PE + +LMT SPI
Sbjct: 626 PYHYAPFAADFVDLGKMKISFEKGRISRPFEQLMSVLPAASRHAIPEVFHDLMTQEDSPI 685
Query: 562 YKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLY 621
FYP DF+ID+NGK+ +WQG+ LPFI+ LL K L+ E+ RN+ D+L
Sbjct: 686 LDFYPEDFEIDLNGKKMSWQGIALLPFIEMPRLLDAMKTKSHLLSAEDKARNAPGHDVLL 745
Query: 622 VHPQHP-LYQQITLYCQLYHQLPPQDRFAWEIDVNASGGMNGYIWLCERNGLRSIIPSPV 680
+ HP LY+ I+ + Q P+ +++D S G++G + E + P+
Sbjct: 746 ISDSHPGLYEDISSHFYSKKQAVPE----FKLDPKRSDGLSGKVRKIEGYVPHGSLVYPL 801
Query: 681 K--GLPDIERNQAM 692
+ +PD++ +++M
Sbjct: 802 ERNTMPDVDYDRSM 815
>gi|66514180|ref|XP_393481.2| PREDICTED: 5'-3' exoribonuclease 1 isoform 1 [Apis mellifera]
Length = 1633
Score = 436 bits (1120), Expect = e-119, Method: Compositional matrix adjust.
Identities = 258/654 (39%), Positives = 359/654 (54%), Gaps = 102/654 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MG+P F+R++ +RYP + +D Q+ EFDNLYLD+NGII
Sbjct: 1 MGIPKFFRYINERYPCLTEKL--KDYQIP------------------EFDNLYLDLNGII 40
Query: 61 HPCFHPDGKPAP--TSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C HPD S + +FK+IF YI +F +++P+KL ++AIDGVAPRAK+NQQR+R
Sbjct: 41 HECSHPDDTDITFRISEEIIFKNIFRYIQVLFCMIQPQKLFFIAIDGVAPRAKINQQRSR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RF+AAKDA EA+ A + KEK DSN ITPGT FM+ L L+YF
Sbjct: 101 RFKAAKDAQIQEAKAR--------AKGINLPKEK--RFDSNCITPGTLFMSKLDEQLKYF 150
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
I +++ WQ KVILS + VPGEGEHKIM YIR + P +D NT+HCLYGLDADLI
Sbjct: 151 ITYKISTDKLWQKCKVILSGSQVPGEGEHKIMDYIRHMKAQPNYDVNTKHCLYGLDADLI 210
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
ML L THEIHF++LRE +T +Q K VC TP
Sbjct: 211 MLGLCTHEIHFTLLREELTFGKKQRK--VCL-------------------------TP-E 242
Query: 299 KKKYQFLNIWVLREYLQYELDI--PNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEI 356
+ K+ ++ +LREY+ +E PF + E+I+DD++ + F +GNDF+PH+P L I
Sbjct: 243 ETKFCLFHLSLLREYINHEFSSLKEKLPFSYDLEKIIDDWILMGFLIGNDFIPHLPNLHI 302
Query: 357 REGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQ------KRTR 410
GA+++L VY + GY+ +AG + LDR EKF++ ++ ++ F K
Sbjct: 303 IHGALSVLYQVYIDVMPTLDGYINEAGTLRLDRFEKFMERLSRFDILQFSEYYADLKYLE 362
Query: 411 IQQAYEYNEAMKLNARRESSEELLQAPVAVADT-----------VKLG----EPG----- 450
+ E KLN ++ S+EE +++P V D + LG E G
Sbjct: 363 SKTGRSLIETEKLNEKKSSNEE-IRSPKKVQDKEFDMLLRTAAEMSLGRYDDEDGGDDKS 421
Query: 451 -----------YKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQW 499
K+ YY +K + N +E + YV + W YYY CSW W
Sbjct: 422 DSEMYTMEFVQCKKDYYINKLKYENIDE--DFLRSQAEGYVRAIQWNLNYYYNGCCSWSW 479
Query: 500 FYPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSS 559
+YP+HYAP+ SD+KD DL++ F LGEPF PF+QL+ LP+ S LP ++ L+T+ S
Sbjct: 480 YYPHHYAPYISDIKDFKDLKLEFELGEPFLPFEQLLAVLPSYSKELLPSAFQTLLTEEQS 539
Query: 560 PIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRN 613
PI +YP +F+ D+NGK W+ VV +PFI+EK LL L+ EE RN
Sbjct: 540 PIINYYPSEFETDLNGKEQEWEAVVLIPFINEKDLLDAMAPHYSKLSLEEQARN 593
>gi|354466144|ref|XP_003495535.1| PREDICTED: 5'-3' exoribonuclease 1 [Cricetulus griseus]
gi|344244388|gb|EGW00492.1| 5'-3' exoribonuclease 1 [Cricetulus griseus]
Length = 1726
Score = 436 bits (1120), Expect = e-119, Method: Compositional matrix adjust.
Identities = 256/707 (36%), Positives = 374/707 (52%), Gaps = 113/707 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP FYRW+++RYP + +VV+E Q+ EFDNLYLDMNGII
Sbjct: 1 MGVPKFYRWISERYPC-LSEVVKEH-QIP------------------EFDNLYLDMNGII 40
Query: 61 HPCFHPDGKPAP--TSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C HP+ S D +F IF Y++ +F +++PRK+ ++A+DGVAPRAKMNQQR R
Sbjct: 41 HQCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RFR+AK+A E++++K E+ G+ L + + DSN ITPGT+FMA L L+YF
Sbjct: 101 RFRSAKEA------EDKIKKAIEK-GETLPTEAR---FDSNCITPGTEFMARLHEHLKYF 150
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
+ +++ WQ + S PGEGEHKIM +IR ++ P DPNTRHCLYGLDADLI
Sbjct: 151 VNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLI 210
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
ML L +HE HFS+LRE + G++ + VC ++T H
Sbjct: 211 MLGLTSHEAHFSLLREEVRFGGKKTQ-RVCAP----------------------EETTFH 247
Query: 299 KKKYQFLNIWVLREYLQYELDI--PNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEI 356
L++ ++REY+ YE F + E+I+DD++ + F VGNDF+PH+P L I
Sbjct: 248 -----LLHLSLMREYIDYEFSALKEKITFKYDIEKIIDDWILMGFLVGNDFIPHLPHLHI 302
Query: 357 REGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQK--------R 408
A+ LL Y +GGY+ ++G + L R E+++ ++ ++ + F +
Sbjct: 303 NHDALPLLYGTYIAILPELGGYINESGHLNLPRFERYLVKLSDFDREHFSEVFVDLKWFE 362
Query: 409 TRIQQAY-------------EYNEAMKLNARRES---------------SEELLQAPVAV 440
+++ Y + E K + S S++ +
Sbjct: 363 SKVGNKYLNEAAGVAAEEAKNFKEKRKSKGQENSLSWAALDKSEGEGVASKDNFEDETED 422
Query: 441 ADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWF 500
D + YK YY K + D+ D YV+ + W+ YYY V SW W+
Sbjct: 423 DDLFETEFRQYKRTYYMTKMGVDVVS--DEFLADQAACYVQAIQWILHYYYHGVQSWSWY 480
Query: 501 YPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSP 560
YPYHYAPF SD++++S L+I F LG+PF+PF+QL+ LP+AS + LP Y++LMT SP
Sbjct: 481 YPYHYAPFLSDIRNISTLKIHFELGKPFKPFEQLLAVLPSASKNLLPTCYQHLMTSEDSP 540
Query: 561 IYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVM---- 616
I ++YPPDF+ D+NGK+ W+ VV +PFIDEK LL + L +EE RN
Sbjct: 541 IIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEERKRNQHSECLM 600
Query: 617 ------LDLLYVHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVNAS 657
+ Y P + I C Y + AW +D+N +
Sbjct: 601 CWYDKDTEFTYSSPWPEKFPAIERCCTRYKIISLD---AWRVDINKN 644
>gi|291399909|ref|XP_002716613.1| PREDICTED: 5'-3' exoribonuclease 1 isoform 3 [Oryctolagus
cuniculus]
Length = 1690
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 260/712 (36%), Positives = 373/712 (52%), Gaps = 125/712 (17%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP FYRW+++RYP + +VV+E Q+ EFDNLYLDMNGII
Sbjct: 1 MGVPKFYRWISERYPC-LSEVVKEH-QIP------------------EFDNLYLDMNGII 40
Query: 61 HPCFHPDGKPAP--TSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C HP+ S D +F IF Y++ +F +++PRK+ ++A+DGVAPRAKMNQQR R
Sbjct: 41 HQCSHPNDDDVHFRISEDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RFR+AK+A E++++K E+ G+ L + + DSN ITPGT+FMA L L+YF
Sbjct: 101 RFRSAKEA------EDKIKKAVEK-GETLPTEAR---FDSNCITPGTEFMARLHEHLKYF 150
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
+ +++ WQ + S PGEGEHKIM +IR ++ P DPNTRHCLYGLDADLI
Sbjct: 151 VNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLI 210
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
ML L +HE HFS+LRE + G++ + VC ++T H
Sbjct: 211 MLGLTSHEAHFSLLREEVRFGGKKTQ-RVCAP----------------------EETTFH 247
Query: 299 KKKYQFLNIWVLREYLQYELDI--PNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEI 356
L++ ++REY+ YE F + ERI+DD++ + F VGNDF+PH+P L I
Sbjct: 248 -----LLHLSLMREYIDYEFSALKEKITFKYDIERIIDDWILMGFLVGNDFIPHLPHLHI 302
Query: 357 REGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIF----------- 405
A+ LL Y +GGY+ ++G + L R EK++ ++ ++ + F
Sbjct: 303 NHDALPLLYGTYITILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSEVFVDLKWFE 362
Query: 406 ------------------------------QKRTRIQQAYEYNEAMKLNARRESSEELLQ 435
Q+ + A + NE + +S++ L+
Sbjct: 363 SKVGNKYLNEAAGIAAEEAKNYKEKKKSKGQENSICWAALDKNEVV-------TSKDNLE 415
Query: 436 APVAVADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVC 495
D + YK YY K + D D YV+ + W+ YYY V
Sbjct: 416 DETEDDDLFETEFRQYKRTYYMTKMGVDVVS--DDFLADQAACYVQAIQWILHYYYHGVQ 473
Query: 496 SWQWFYPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMT 555
SW W+YPYHYAPF SD++++S L+I F LG+PF+PF+QL+ LPAAS + LP Y++LMT
Sbjct: 474 SWSWYYPYHYAPFLSDIRNISTLKIHFELGKPFKPFEQLLAVLPAASKNLLPACYQHLMT 533
Query: 556 DPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSV 615
SPI ++YPPDF+ D+NGK+ W+ VV +PFIDEK LL + L +EE RN
Sbjct: 534 SEDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMEACNHSLKKEERKRNQH 593
Query: 616 M----------LDLLYVHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVNAS 657
+ Y P + I C Y + AW +D+N +
Sbjct: 594 SECLMCWYDGETEFTYPSPWPEKFPAIERCCARYKIISLD---AWRVDINKN 642
>gi|291399907|ref|XP_002716612.1| PREDICTED: 5'-3' exoribonuclease 1 isoform 2 [Oryctolagus
cuniculus]
Length = 1702
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 260/712 (36%), Positives = 373/712 (52%), Gaps = 125/712 (17%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP FYRW+++RYP + +VV+E Q+ EFDNLYLDMNGII
Sbjct: 1 MGVPKFYRWISERYPC-LSEVVKEH-QIP------------------EFDNLYLDMNGII 40
Query: 61 HPCFHPDGKPAP--TSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C HP+ S D +F IF Y++ +F +++PRK+ ++A+DGVAPRAKMNQQR R
Sbjct: 41 HQCSHPNDDDVHFRISEDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RFR+AK+A E++++K E+ G+ L + + DSN ITPGT+FMA L L+YF
Sbjct: 101 RFRSAKEA------EDKIKKAVEK-GETLPTEAR---FDSNCITPGTEFMARLHEHLKYF 150
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
+ +++ WQ + S PGEGEHKIM +IR ++ P DPNTRHCLYGLDADLI
Sbjct: 151 VNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLI 210
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
ML L +HE HFS+LRE + G++ + VC ++T H
Sbjct: 211 MLGLTSHEAHFSLLREEVRFGGKKTQ-RVCAP----------------------EETTFH 247
Query: 299 KKKYQFLNIWVLREYLQYELDI--PNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEI 356
L++ ++REY+ YE F + ERI+DD++ + F VGNDF+PH+P L I
Sbjct: 248 -----LLHLSLMREYIDYEFSALKEKITFKYDIERIIDDWILMGFLVGNDFIPHLPHLHI 302
Query: 357 REGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIF----------- 405
A+ LL Y +GGY+ ++G + L R EK++ ++ ++ + F
Sbjct: 303 NHDALPLLYGTYITILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSEVFVDLKWFE 362
Query: 406 ------------------------------QKRTRIQQAYEYNEAMKLNARRESSEELLQ 435
Q+ + A + NE + +S++ L+
Sbjct: 363 SKVGNKYLNEAAGIAAEEAKNYKEKKKSKGQENSICWAALDKNEVV-------TSKDNLE 415
Query: 436 APVAVADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVC 495
D + YK YY K + D D YV+ + W+ YYY V
Sbjct: 416 DETEDDDLFETEFRQYKRTYYMTKMGVDVVS--DDFLADQAACYVQAIQWILHYYYHGVQ 473
Query: 496 SWQWFYPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMT 555
SW W+YPYHYAPF SD++++S L+I F LG+PF+PF+QL+ LPAAS + LP Y++LMT
Sbjct: 474 SWSWYYPYHYAPFLSDIRNISTLKIHFELGKPFKPFEQLLAVLPAASKNLLPACYQHLMT 533
Query: 556 DPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSV 615
SPI ++YPPDF+ D+NGK+ W+ VV +PFIDEK LL + L +EE RN
Sbjct: 534 SEDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMEACNHSLKKEERKRNQH 593
Query: 616 M----------LDLLYVHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVNAS 657
+ Y P + I C Y + AW +D+N +
Sbjct: 594 SECLMCWYDGETEFTYPSPWPEKFPAIERCCARYKIISLD---AWRVDINKN 642
>gi|449269264|gb|EMC80058.1| 5'-3' exoribonuclease 2, partial [Columba livia]
Length = 914
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 211/378 (55%), Positives = 275/378 (72%), Gaps = 2/378 (0%)
Query: 32 GVARPVDVSKPNPNGMEFDNLYLDMNGIIHPCFHPDGKPAPTSYDDVFKSIFDYIDHIFL 91
GV P+D SKPNPN +EFDNLYLDMNGIIHPC HP+ KPAP + D++ +IF+YID IF
Sbjct: 7 GVKVPIDTSKPNPNEVEFDNLYLDMNGIIHPCTHPEDKPAPKNEDEMMVAIFEYIDRIFN 66
Query: 92 LVRPRKLLYLAIDGVAPRAKMNQQRTRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKE 151
+VRPR+LLY+AIDGVAPRAKMNQQR+RRFRA+K+ EA E++++R+E G +L +E
Sbjct: 67 IVRPRRLLYMAIDGVAPRAKMNQQRSRRFRASKEGMEAAEEKQKIRQEILSKGGILPPEE 126
Query: 152 KPETCDSNVITPGTQFMAVLSAALQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMS 211
E DSN ITPGT+FM L+ L+Y+I RLN PGW+ VILSDA+ PGEGEHKIM
Sbjct: 127 VKERFDSNCITPGTEFMDNLAKCLRYYIADRLNSDPGWKNLTVILSDASAPGEGEHKIMD 186
Query: 212 YIRLQRNLPGFDPNTRHCLYGLDADLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQV 271
YIR QR P DPNT HCL G DADLIML LATHE +F+I+RE P + + C +C Q+
Sbjct: 187 YIRRQRAQPNHDPNTHHCLCGADADLIMLGLATHEPNFTIIREEFK-PNKPKPCALCNQM 245
Query: 272 GHLAAECHGKPGDNPADWNGVDDT-PIHKKKYQFLNIWVLREYLQYELDIPNPPFPINFE 330
GH +C G P + + D+ P+ ++++ F+ + VLREYL+ EL + + PF +FE
Sbjct: 246 GHEVKDCQGLPREKQGKHDQFADSLPVAEQEFIFIRLCVLREYLERELTMASLPFTFDFE 305
Query: 331 RIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRV 390
R VDD+VF+CFFVGNDFLPH+P+LEIREGAI+ L+++Y+ GGYLT++G V L RV
Sbjct: 306 RSVDDWVFMCFFVGNDFLPHLPSLEIREGAIDRLVNIYKNVVHKTGGYLTESGFVNLQRV 365
Query: 391 EKFIQSVAVYEDQIFQKR 408
+ + +V ED IF+KR
Sbjct: 366 QMIMLAVGEVEDSIFKKR 383
Score = 208 bits (530), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 112/253 (44%), Positives = 154/253 (60%), Gaps = 10/253 (3%)
Query: 442 DTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFY 501
D ++L E G+K+RYY +KF++ +E K ++ VV YVEGLCWV RYYYQ SW W+Y
Sbjct: 483 DNIRLWETGWKQRYYKNKFDVDASDE--KFRRKVVQSYVEGLCWVLRYYYQGCASWNWYY 540
Query: 502 PYHYAPFASDLKDLSDLEITFFLG-EPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSP 560
P+HYAPFASD + ++D+ F G +PF+P +QLMG PAAS + LP +R LMTDP S
Sbjct: 541 PFHYAPFASDFEGIADMPSDFEKGSKPFKPLEQLMGVFPAASGNFLPPTWRKLMTDPESS 600
Query: 561 IYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLL 620
I FYP DF ID+NGK++AWQGV LPF+DE+ L +++ LT EE RNS+ D+L
Sbjct: 601 IIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEESRRNSLGGDVL 660
Query: 621 YVHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVNASGGMNGYIWLCERNGL-RSIIPSP 679
+V HPL I + + P +I G+ G + L + L + SP
Sbjct: 661 FVGKHHPLCDFIVEQYKTKNTEP------VDIPPELCHGIQGKLTLNDNAVLPEQTVESP 714
Query: 680 VKGLPDIERNQAM 692
V L D+ +N A+
Sbjct: 715 VPMLRDLTQNSAI 727
>gi|145347657|ref|XP_001418279.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578508|gb|ABO96572.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 509
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 252/599 (42%), Positives = 331/599 (55%), Gaps = 95/599 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP F+RWLA+RYPL ++ Q+ G DNLYLDMNG+I
Sbjct: 1 MGVPKFFRWLAERYPLLQQEIAGN--QIPG------------------IDNLYLDMNGVI 40
Query: 61 HPCFHPDGKPAPT--SYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C H G T + D++ +F Y+DH+F + RP K+LY+AIDGVAPRAKMNQQR+R
Sbjct: 41 HNCSHGAGTDVNTRMTEDEMMSKVFAYLDHLFRMTRPNKMLYMAIDGVAPRAKMNQQRSR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RFR+A +AA+ + EE R R E E G E DSN ITPGT+FMA L+ L+++
Sbjct: 101 RFRSAAEAAK-DREEARARGEPEPEG---------EPFDSNCITPGTEFMARLTEHLKFY 150
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
++ + + P W VILS V GEGEHKIM +IR R P ++PN HCLYGLDADLI
Sbjct: 151 VRKKQTEDPLWAKVTVILSGHEVRGEGEHKIMEHIRWARTQPDWEPNQTHCLYGLDADLI 210
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
ML+L THE HF +LREV+ G G+ G + E P D+
Sbjct: 211 MLALVTHEPHFCLLREVVKFGG--------GEKGQPSREILSNPTDD------------- 249
Query: 299 KKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIRE 358
+ L+I +LREYL E N PF ER++DDF+ LC VGNDFLP +PTL I E
Sbjct: 250 --GFILLHIGLLREYLDLEFREKNLPFGYELERVIDDFILLCMLVGNDFLPALPTLNIAE 307
Query: 359 GAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYEYN 418
GA+N L VY +GGY+T + + ++ T + A
Sbjct: 308 GALNTLFKVYHDTLPMLGGYITGD------------EGGGTFNPELSADPTMMNAA---K 352
Query: 419 EAMKLNARRESSEELLQAPVAVADTVKLGEPGYKERYYADK--FEISNPEEIDKVKKDVV 476
A+ L E EE LQA +K+ YY +K +I + ++++
Sbjct: 353 RALIL----EGGEEGLQA--------------WKDTYYREKLGLKIGEAAPLGEIRQ--- 391
Query: 477 LKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDL-KDLSDLEITFFLGEPFRPFDQLM 535
Y +GL WV RYYY+ V SW W+YPYHYAP ASDL + L F GEPF+PF+QLM
Sbjct: 392 -AYFDGLNWVLRYYYRGVASWTWYYPYHYAPMASDLCAGMGGLTSEFDYGEPFKPFEQLM 450
Query: 536 GTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLL 594
P +SS LPE +R+ M DP SP+ +F+P D ++D GKR W+GVV LPF+D L
Sbjct: 451 AVQPPSSSKLLPEPFRHFMEDPQSPLAEFFPEDIKVDFEGKRNDWEGVVLLPFLDADRL 509
>gi|291399905|ref|XP_002716611.1| PREDICTED: 5'-3' exoribonuclease 1 isoform 1 [Oryctolagus
cuniculus]
Length = 1727
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 260/712 (36%), Positives = 373/712 (52%), Gaps = 125/712 (17%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP FYRW+++RYP + +VV+E Q+ EFDNLYLDMNGII
Sbjct: 1 MGVPKFYRWISERYPC-LSEVVKEH-QIP------------------EFDNLYLDMNGII 40
Query: 61 HPCFHPDGKPAP--TSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C HP+ S D +F IF Y++ +F +++PRK+ ++A+DGVAPRAKMNQQR R
Sbjct: 41 HQCSHPNDDDVHFRISEDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RFR+AK+A E++++K E+ G+ L + + DSN ITPGT+FMA L L+YF
Sbjct: 101 RFRSAKEA------EDKIKKAVEK-GETLPTEAR---FDSNCITPGTEFMARLHEHLKYF 150
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
+ +++ WQ + S PGEGEHKIM +IR ++ P DPNTRHCLYGLDADLI
Sbjct: 151 VNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLI 210
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
ML L +HE HFS+LRE + G++ + VC ++T H
Sbjct: 211 MLGLTSHEAHFSLLREEVRFGGKKTQ-RVCAP----------------------EETTFH 247
Query: 299 KKKYQFLNIWVLREYLQYELDI--PNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEI 356
L++ ++REY+ YE F + ERI+DD++ + F VGNDF+PH+P L I
Sbjct: 248 -----LLHLSLMREYIDYEFSALKEKITFKYDIERIIDDWILMGFLVGNDFIPHLPHLHI 302
Query: 357 REGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIF----------- 405
A+ LL Y +GGY+ ++G + L R EK++ ++ ++ + F
Sbjct: 303 NHDALPLLYGTYITILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSEVFVDLKWFE 362
Query: 406 ------------------------------QKRTRIQQAYEYNEAMKLNARRESSEELLQ 435
Q+ + A + NE + +S++ L+
Sbjct: 363 SKVGNKYLNEAAGIAAEEAKNYKEKKKSKGQENSICWAALDKNEVV-------TSKDNLE 415
Query: 436 APVAVADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVC 495
D + YK YY K + D D YV+ + W+ YYY V
Sbjct: 416 DETEDDDLFETEFRQYKRTYYMTKMGVDVVS--DDFLADQAACYVQAIQWILHYYYHGVQ 473
Query: 496 SWQWFYPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMT 555
SW W+YPYHYAPF SD++++S L+I F LG+PF+PF+QL+ LPAAS + LP Y++LMT
Sbjct: 474 SWSWYYPYHYAPFLSDIRNISTLKIHFELGKPFKPFEQLLAVLPAASKNLLPACYQHLMT 533
Query: 556 DPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSV 615
SPI ++YPPDF+ D+NGK+ W+ VV +PFIDEK LL + L +EE RN
Sbjct: 534 SEDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMEACNHSLKKEERKRNQH 593
Query: 616 M----------LDLLYVHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVNAS 657
+ Y P + I C Y + AW +D+N +
Sbjct: 594 SECLMCWYDGETEFTYPSPWPEKFPAIERCCARYKIISLD---AWRVDINKN 642
>gi|291220730|ref|XP_002730377.1| PREDICTED: rCG25308-like [Saccoglossus kowalevskii]
Length = 2104
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 260/678 (38%), Positives = 365/678 (53%), Gaps = 114/678 (16%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP FYRW+++RYP + +VV E+ Q+ EFDNLYLDMNG+I
Sbjct: 1 MGVPKFYRWISERYPC-LSEVVREN-QIP------------------EFDNLYLDMNGVI 40
Query: 61 HPCFHP-DGKPA-PTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C HP D P S + +FK IF YI+ +F +++PRK+ ++A+DGVAPRAKMNQQR R
Sbjct: 41 HVCSHPNDDDPHFRISEEKIFKDIFHYIEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RFR+A+ A E E K+ G+ L +++ DSN ITPGT+FM L+ L+YF
Sbjct: 101 RFRSARAAEEQE-------KKALSKGETLPTEKR---FDSNCITPGTEFMVKLNEQLKYF 150
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
+ ++ + W+ ++ LS PGEGEHK+M +IR ++ P +DPNTRHCLYGLDADL+
Sbjct: 151 VNKKITEDEMWRGLRIYLSGHETPGEGEHKVMEFIRAEKADPKYDPNTRHCLYGLDADLM 210
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
ML L +HE HFS+LRE + + K P ++T H
Sbjct: 211 MLGLTSHEPHFSLLREEV----------------RFGKKSQQKRTPTP------EETTFH 248
Query: 299 KKKYQFLNIWVLREYLQYEL-DIPNP-PFPINFERIVDDFVFLCFFVGNDFLPHMPTLEI 356
L++ + REYL++E D+ F + ERI+DD+V + F VGNDF+PH+P L I
Sbjct: 249 -----LLHLSLFREYLEFEFQDVKGKISFDYDLERIIDDWVLMGFLVGNDFIPHLPDLHI 303
Query: 357 REGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQ---------- 406
A+ LL Y + GYL + G + L R E +++ ++ ++ F
Sbjct: 304 NHDALPLLYKTYIEVLPLVDGYLNEDGILNLKRFEVYLKKLSEFDRNKFSETSVDLKYFE 363
Query: 407 -----------KRTRIQQAYEYNEAMKL------------------------NARRESSE 431
K RI++ E EA++ N + S E
Sbjct: 364 GKKGSTEGSAWKGQRIKKREEKKEALRAAKNLAQASMFQVLSTTEESEDSSDNGNKNSVE 423
Query: 432 EL------LQAPVAVADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCW 485
L L A V A+ ++ +K YY K N E +V KD L YV G+ W
Sbjct: 424 TLFDEETKLDADVDEAEIFEMEFRQHKRNYYQTKLGYENVTE--EVLKDQALCYVTGIQW 481
Query: 486 VCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSA 545
+ YYY V SW W+YP+HYAPF SD+ SD E+ + +G PF+PF+QL+ LPAAS
Sbjct: 482 ILHYYYNGVQSWGWYYPHHYAPFMSDVCGFSDCELKYDIGRPFKPFEQLLAVLPAASGEL 541
Query: 546 LPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFL 605
LP+ +++LM +SPI ++YP DF D+NGK+ W+ VV +PFIDEK LL L L
Sbjct: 542 LPKPFQSLMIMDNSPIIEYYPVDFDTDLNGKQQDWEAVVLIPFIDEKCLLDAMAPLNNIL 601
Query: 606 TEEELFRNSVMLDLLYVH 623
T+EE RNS LLY +
Sbjct: 602 TDEEKRRNSHGPHLLYTY 619
>gi|293349379|ref|XP_001069029.2| PREDICTED: 5'-3' exoribonuclease 1 isoform 1 [Rattus norvegicus]
gi|293361286|ref|XP_217233.5| PREDICTED: 5'-3' exoribonuclease 1 isoform 3 [Rattus norvegicus]
Length = 1723
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 248/653 (37%), Positives = 358/653 (54%), Gaps = 100/653 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP FYRW+++RYP + +VV+E Q+ EFDNLYLDMNGII
Sbjct: 1 MGVPKFYRWISERYPC-LSEVVKEH-QIP------------------EFDNLYLDMNGII 40
Query: 61 HPCFHPDGKPAP--TSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C HP+ S D +F IF Y++ +F +++PRK+ ++A+DGVAPRAKMNQQR R
Sbjct: 41 HQCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RFR+AK+A E++++K E+ G+ L + + DSN ITPGT+FMA L L+YF
Sbjct: 101 RFRSAKEA------EDKIKKAIEK-GETLPTEAR---FDSNCITPGTEFMARLHEHLKYF 150
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
+ +++ WQ + S PGEGEHKIM +IR ++ P DPNTRHCLYGLDADLI
Sbjct: 151 VNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLI 210
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
ML L +HE HFS+LRE + G++ + VC ++T H
Sbjct: 211 MLGLTSHEAHFSLLREEVRFGGKKTQ-RVCAP----------------------EETTFH 247
Query: 299 KKKYQFLNIWVLREYLQYELDI--PNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEI 356
L++ ++REY+ YE F + E+I+DD++ + F VGNDF+PH+P L I
Sbjct: 248 -----LLHLSLMREYIDYEFSALKEKITFKYDIEKIIDDWILMGFLVGNDFIPHLPHLHI 302
Query: 357 REGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQ---------- 406
A+ LL Y +GGY+ ++G + L R E+++ ++ ++ + F
Sbjct: 303 NHDALPLLYGTYIAILPELGGYINESGHLNLPRFERYLVKLSDFDREHFSEVFVDLKWFE 362
Query: 407 ----------------------KRTRIQQAYEYNEAMKLNARRE----SSEELLQAPVAV 440
K R + E + + +RE +S + +
Sbjct: 363 SKVGNKYLNEAAGAAAEEAKSCKDKRKVKGQENSLSWAALDKREGEGVASRDNFEDETED 422
Query: 441 ADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWF 500
D + YK YY K + D+ D YV+ + W+ YYY V SW W+
Sbjct: 423 DDLFETEFRQYKRTYYMTKMGVDVVS--DEFLADQAACYVQAIQWILHYYYHGVQSWSWY 480
Query: 501 YPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSP 560
YPYHYAPF SD++++S L+I F LG+PF+PF+QL+ LP+AS + LP Y++LMT SP
Sbjct: 481 YPYHYAPFLSDIRNISTLKIHFELGKPFKPFEQLLAVLPSASKTLLPTCYQHLMTSEDSP 540
Query: 561 IYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRN 613
I ++YPPDF+ D+NGK+ W+ VV +PFIDEK LL + L +EE RN
Sbjct: 541 IIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEERKRN 593
>gi|198471055|ref|XP_001355485.2| GA17195 [Drosophila pseudoobscura pseudoobscura]
gi|198145746|gb|EAL32544.2| GA17195 [Drosophila pseudoobscura pseudoobscura]
Length = 1533
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 248/639 (38%), Positives = 361/639 (56%), Gaps = 90/639 (14%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP F+R++++RYP + ++ E S P EFDNLYLDMNGI+
Sbjct: 1 MGVPKFFRYISERYP-CLSELAREH--------------SIP-----EFDNLYLDMNGIV 40
Query: 61 HPCFHPDGKPAPTSYDD--VFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C HPD ++ +F+ IF+Y+D +F L++P+KL +LA+DGVAPRAKMNQQR+R
Sbjct: 41 HNCSHPDDNNIHFHLEEQQIFQDIFNYVDKLFYLIKPQKLFFLAVDGVAPRAKMNQQRSR 100
Query: 119 RFRAAKDAA--EAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQ 176
RFR+A++A EA+A + R+E E DSN ITPGT FM L L+
Sbjct: 101 RFRSAREAEMLEAKALQRGERREHERF-------------DSNCITPGTDFMERLQQGLR 147
Query: 177 YFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDAD 236
F++ +++ P WQ VILS PGEGEHKIM YIR + P FDPNTRHCLYGLDAD
Sbjct: 148 CFLKTKISTDPLWQKCSVILSGQETPGEGEHKIMDYIRYMKAQPNFDPNTRHCLYGLDAD 207
Query: 237 LIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTP 296
LI+L L THE+HF +LRE + K G N V
Sbjct: 208 LIILGLCTHELHFVVLREEV------------------------KFGRN------VKRAS 237
Query: 297 IHKKKYQFLNIWVLREYLQYELDIPNPP-FPINFERIVDDFVFLCFFVGNDFLPHMPTLE 355
+ + ++ L++ +LREYL+ E N ++ +++DD+V + F VGNDF+PH+P L
Sbjct: 238 VEETRFFLLHLGLLREYLELEFHQLNTAQHKLDVAQLIDDWVLMGFMVGNDFIPHLPCLH 297
Query: 356 IREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYE-DQIFQKRTRIQQA 414
I A+ LL Y R + ++GG + + G++ L R++ F+ +++ E +Q + ++ A
Sbjct: 298 ISSNALPLLYKTYIRIYHSLGGNINEHGKLNLQRLQIFMTALSEVELEQYKEHADDLKYA 357
Query: 415 YEYNEAMKLNARRESSEELLQAPVA--VADTVKLGE------------------PGYKER 454
EA ++ S + + + + D+ +L YK
Sbjct: 358 NGNTEAFDIDVGDIDSSKDYDSDLKALIDDSTQLYNDDSDEDLSDEEAGVLKDFQNYKRN 417
Query: 455 YYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKD 514
YY +KF +S+ +++ +++ YV L W+ YYY+ V SW W+YP+HYAPF SDL +
Sbjct: 418 YYRNKFNLSS-RPPNQLIEELGHHYVTALQWILDYYYRGVQSWDWYYPFHYAPFISDLNN 476
Query: 515 LSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMN 574
++ ++I F LG PF PF+QL+G LPAAS LP Y +LM P+SP+ +FYP DF+ D+N
Sbjct: 477 IATVQIKFQLGTPFLPFEQLLGVLPAASFKLLPNAYHDLMLKPTSPLAEFYPTDFKSDLN 536
Query: 575 GKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRN 613
GK+ W+ VV +PFIDE LLL + E L+ E RN
Sbjct: 537 GKKHDWEAVVLIPFIDECLLLSVMRPCEAHLSTAERARN 575
>gi|321260270|ref|XP_003194855.1| strand exchange protein (5'-3' exoribonuclease) [Cryptococcus
gattii WM276]
gi|317461327|gb|ADV23068.1| Strand exchange protein (5'-3' exoribonuclease), putative
[Cryptococcus gattii WM276]
Length = 1129
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 216/430 (50%), Positives = 294/430 (68%), Gaps = 10/430 (2%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQV----DGEGVARPVDVSKPNPNGMEFDNLYLDM 56
MGVPA +RWL+ +YP + V E+ P+ DGE V P+ PNPNG E DNLYLDM
Sbjct: 1 MGVPALFRWLSKKYPKIVERVKEDTPKKIRGPDGEIVEEPIRYENPNPNGFEVDNLYLDM 60
Query: 57 NGIIHPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQR 116
NGI+HPC HP+G+PAP + +++ IF Y + + + RPRK+L +AIDGVAPRAKMNQQR
Sbjct: 61 NGIVHPCTHPEGRPAPETEEEMMVEIFKYTERVVNMCRPRKVLMMAIDGVAPRAKMNQQR 120
Query: 117 TRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKE-KPETCDSNVITPGTQFMAVLSAAL 175
+RRFRAA++AA+ E E + K FE G +S + ++ D+N ITPGT FM +LS +L
Sbjct: 121 SRRFRAAQEAADKEEERKEAVKLFEAMGHTVSEETANRKSWDTNAITPGTPFMDLLSISL 180
Query: 176 QYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDA 235
+Y++ +L PGW+ K+ILSD++VPGEGEHKIM +IR QR+ P +D NT H +YGLDA
Sbjct: 181 KYWVSYKLTTDPGWKDLKIILSDSSVPGEGEHKIMDWIRRQRSYPTWDANTSHVIYGLDA 240
Query: 236 DLIMLSLATHEIHFSILREVITLPGQQ--EKCFVCGQVGHLAAECHGKPGDNPADWNGVD 293
DLIMLSLATHE HF +LRE + + C CG+VGH+AA C G D N V+
Sbjct: 241 DLIMLSLATHEPHFRVLREDVFAQSSKGPPACKNCGKVGHIAANCKGD--KKVKDPNVVE 298
Query: 294 DTPIHK-KKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMP 352
K + FL++ LREYL EL +P PFP + E +DD++F+ FFVGNDFLPH+P
Sbjct: 299 VAKTEDPKPFIFLDVACLREYLAIELVVPGVPFPFDLELAIDDWIFMIFFVGNDFLPHLP 358
Query: 353 TLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQ 412
+LEIREGAI++L+ ++R E MGGYLT+ G+V LDR + ++ +A ED+IFQKR +
Sbjct: 359 SLEIREGAIDVLLKIWRAELPRMGGYLTNHGKVNLDRAQVILEGLAKSEDEIFQKRKDDE 418
Query: 413 QAYEYNEAMK 422
+ E+++ +
Sbjct: 419 ERQEHSQKRR 428
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 113/229 (49%), Positives = 143/229 (62%), Gaps = 11/229 (4%)
Query: 438 VAVADTVKLGEPGYKERYYADKF--EISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVC 495
V D +KL EPGY+ERYY KF ++S E IDKV K Y+EGLCWV YYYQ V
Sbjct: 685 VDYEDDIKLWEPGYRERYYEKKFGVKLSEREFIDKVTK----SYMEGLCWVLEYYYQGVP 740
Query: 496 SWQWFYPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMT 555
+W WFYPYHYAPFA D + + ++I F PF+PF QL+G PAAS LPE + LM
Sbjct: 741 AWDWFYPYHYAPFAQDFRSVGSMDIKFETSMPFKPFAQLLGVFPAASRIHLPEPLQTLMI 800
Query: 556 DPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSV 615
D SPI FYPPDF+IDMNGK+ AWQGV LPFID+ LL K E L+++E RNS
Sbjct: 801 DEDSPILDFYPPDFEIDMNGKKMAWQGVALLPFIDQNRLLTALKSKEELLSDDEKRRNSW 860
Query: 616 MLDLLYVHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVNASGGMNGYI 664
+++++ ++PLY L+C + L +D ID AS GM G +
Sbjct: 861 GDNVMFIANENPLYD---LFCDKLYGLRAKDPIP--IDTKASYGMTGSV 904
>gi|392342051|ref|XP_003754494.1| PREDICTED: 5'-3' exoribonuclease 1 [Rattus norvegicus]
gi|392350274|ref|XP_003750610.1| PREDICTED: 5'-3' exoribonuclease 1 [Rattus norvegicus]
Length = 1706
Score = 434 bits (1115), Expect = e-118, Method: Compositional matrix adjust.
Identities = 248/653 (37%), Positives = 358/653 (54%), Gaps = 100/653 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP FYRW+++RYP + +VV+E Q+ EFDNLYLDMNGII
Sbjct: 1 MGVPKFYRWISERYPC-LSEVVKEH-QIP------------------EFDNLYLDMNGII 40
Query: 61 HPCFHPDGKPAP--TSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C HP+ S D +F IF Y++ +F +++PRK+ ++A+DGVAPRAKMNQQR R
Sbjct: 41 HQCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RFR+AK+A E++++K E+ G+ L + + DSN ITPGT+FMA L L+YF
Sbjct: 101 RFRSAKEA------EDKIKKAIEK-GETLPTEAR---FDSNCITPGTEFMARLHEHLKYF 150
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
+ +++ WQ + S PGEGEHKIM +IR ++ P DPNTRHCLYGLDADLI
Sbjct: 151 VNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLI 210
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
ML L +HE HFS+LRE + G++ + VC ++T H
Sbjct: 211 MLGLTSHEAHFSLLREEVRFGGKKTQ-RVCAP----------------------EETTFH 247
Query: 299 KKKYQFLNIWVLREYLQYELDI--PNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEI 356
L++ ++REY+ YE F + E+I+DD++ + F VGNDF+PH+P L I
Sbjct: 248 -----LLHLSLMREYIDYEFSALKEKITFKYDIEKIIDDWILMGFLVGNDFIPHLPHLHI 302
Query: 357 REGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQ---------- 406
A+ LL Y +GGY+ ++G + L R E+++ ++ ++ + F
Sbjct: 303 NHDALPLLYGTYIAILPELGGYINESGHLNLPRFERYLVKLSDFDREHFSEVFVDLKWFE 362
Query: 407 ----------------------KRTRIQQAYEYNEAMKLNARRE----SSEELLQAPVAV 440
K R + E + + +RE +S + +
Sbjct: 363 SKVGNKYLNEAAGAAAEEAKSCKDKRKVKGQENSLSWAALDKREGEGVASRDNFEDETED 422
Query: 441 ADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWF 500
D + YK YY K + D+ D YV+ + W+ YYY V SW W+
Sbjct: 423 DDLFETEFRQYKRTYYMTKMGVDVVS--DEFLADQAACYVQAIQWILHYYYHGVQSWSWY 480
Query: 501 YPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSP 560
YPYHYAPF SD++++S L+I F LG+PF+PF+QL+ LP+AS + LP Y++LMT SP
Sbjct: 481 YPYHYAPFLSDIRNISTLKIHFELGKPFKPFEQLLAVLPSASKTLLPTCYQHLMTSEDSP 540
Query: 561 IYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRN 613
I ++YPPDF+ D+NGK+ W+ VV +PFIDEK LL + L +EE RN
Sbjct: 541 IIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEERKRN 593
>gi|293349381|ref|XP_002727166.1| PREDICTED: 5'-3' exoribonuclease 1 isoform 2 [Rattus norvegicus]
gi|293361288|ref|XP_002730002.1| PREDICTED: 5'-3' exoribonuclease 1 isoform 1 [Rattus norvegicus]
Length = 1686
Score = 433 bits (1114), Expect = e-118, Method: Compositional matrix adjust.
Identities = 248/653 (37%), Positives = 358/653 (54%), Gaps = 100/653 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP FYRW+++RYP + +VV+E Q+ EFDNLYLDMNGII
Sbjct: 1 MGVPKFYRWISERYPC-LSEVVKEH-QIP------------------EFDNLYLDMNGII 40
Query: 61 HPCFHPDGKPAP--TSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C HP+ S D +F IF Y++ +F +++PRK+ ++A+DGVAPRAKMNQQR R
Sbjct: 41 HQCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RFR+AK+A E++++K E+ G+ L + + DSN ITPGT+FMA L L+YF
Sbjct: 101 RFRSAKEA------EDKIKKAIEK-GETLPTEAR---FDSNCITPGTEFMARLHEHLKYF 150
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
+ +++ WQ + S PGEGEHKIM +IR ++ P DPNTRHCLYGLDADLI
Sbjct: 151 VNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLI 210
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
ML L +HE HFS+LRE + G++ + VC ++T H
Sbjct: 211 MLGLTSHEAHFSLLREEVRFGGKKTQ-RVCAP----------------------EETTFH 247
Query: 299 KKKYQFLNIWVLREYLQYELDI--PNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEI 356
L++ ++REY+ YE F + E+I+DD++ + F VGNDF+PH+P L I
Sbjct: 248 -----LLHLSLMREYIDYEFSALKEKITFKYDIEKIIDDWILMGFLVGNDFIPHLPHLHI 302
Query: 357 REGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQ---------- 406
A+ LL Y +GGY+ ++G + L R E+++ ++ ++ + F
Sbjct: 303 NHDALPLLYGTYIAILPELGGYINESGHLNLPRFERYLVKLSDFDREHFSEVFVDLKWFE 362
Query: 407 ----------------------KRTRIQQAYEYNEAMKLNARRE----SSEELLQAPVAV 440
K R + E + + +RE +S + +
Sbjct: 363 SKVGNKYLNEAAGAAAEEAKSCKDKRKVKGQENSLSWAALDKREGEGVASRDNFEDETED 422
Query: 441 ADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWF 500
D + YK YY K + D+ D YV+ + W+ YYY V SW W+
Sbjct: 423 DDLFETEFRQYKRTYYMTKMGVDVVS--DEFLADQAACYVQAIQWILHYYYHGVQSWSWY 480
Query: 501 YPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSP 560
YPYHYAPF SD++++S L+I F LG+PF+PF+QL+ LP+AS + LP Y++LMT SP
Sbjct: 481 YPYHYAPFLSDIRNISTLKIHFELGKPFKPFEQLLAVLPSASKTLLPTCYQHLMTSEDSP 540
Query: 561 IYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRN 613
I ++YPPDF+ D+NGK+ W+ VV +PFIDEK LL + L +EE RN
Sbjct: 541 IIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEERKRN 593
>gi|293349383|ref|XP_002727167.1| PREDICTED: 5'-3' exoribonuclease 1 isoform 3 [Rattus norvegicus]
gi|293361290|ref|XP_002730003.1| PREDICTED: 5'-3' exoribonuclease 1 isoform 2 [Rattus norvegicus]
gi|149018866|gb|EDL77507.1| rCG25308 [Rattus norvegicus]
Length = 1685
Score = 433 bits (1114), Expect = e-118, Method: Compositional matrix adjust.
Identities = 248/653 (37%), Positives = 358/653 (54%), Gaps = 100/653 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP FYRW+++RYP + +VV+E Q+ EFDNLYLDMNGII
Sbjct: 1 MGVPKFYRWISERYPC-LSEVVKEH-QIP------------------EFDNLYLDMNGII 40
Query: 61 HPCFHPDGKPAP--TSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C HP+ S D +F IF Y++ +F +++PRK+ ++A+DGVAPRAKMNQQR R
Sbjct: 41 HQCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RFR+AK+A E++++K E+ G+ L + + DSN ITPGT+FMA L L+YF
Sbjct: 101 RFRSAKEA------EDKIKKAIEK-GETLPTEAR---FDSNCITPGTEFMARLHEHLKYF 150
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
+ +++ WQ + S PGEGEHKIM +IR ++ P DPNTRHCLYGLDADLI
Sbjct: 151 VNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLI 210
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
ML L +HE HFS+LRE + G++ + VC ++T H
Sbjct: 211 MLGLTSHEAHFSLLREEVRFGGKKTQ-RVCAP----------------------EETTFH 247
Query: 299 KKKYQFLNIWVLREYLQYELDI--PNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEI 356
L++ ++REY+ YE F + E+I+DD++ + F VGNDF+PH+P L I
Sbjct: 248 -----LLHLSLMREYIDYEFSALKEKITFKYDIEKIIDDWILMGFLVGNDFIPHLPHLHI 302
Query: 357 REGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQ---------- 406
A+ LL Y +GGY+ ++G + L R E+++ ++ ++ + F
Sbjct: 303 NHDALPLLYGTYIAILPELGGYINESGHLNLPRFERYLVKLSDFDREHFSEVFVDLKWFE 362
Query: 407 ----------------------KRTRIQQAYEYNEAMKLNARRE----SSEELLQAPVAV 440
K R + E + + +RE +S + +
Sbjct: 363 SKVGNKYLNEAAGAAAEEAKSCKDKRKVKGQENSLSWAALDKREGEGVASRDNFEDETED 422
Query: 441 ADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWF 500
D + YK YY K + D+ D YV+ + W+ YYY V SW W+
Sbjct: 423 DDLFETEFRQYKRTYYMTKMGVDVVS--DEFLADQAACYVQAIQWILHYYYHGVQSWSWY 480
Query: 501 YPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSP 560
YPYHYAPF SD++++S L+I F LG+PF+PF+QL+ LP+AS + LP Y++LMT SP
Sbjct: 481 YPYHYAPFLSDIRNISTLKIHFELGKPFKPFEQLLAVLPSASKTLLPTCYQHLMTSEDSP 540
Query: 561 IYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRN 613
I ++YPPDF+ D+NGK+ W+ VV +PFIDEK LL + L +EE RN
Sbjct: 541 IIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEERKRN 593
>gi|405121347|gb|AFR96116.1| 5'-3' exoribonuclease 2 [Cryptococcus neoformans var. grubii H99]
Length = 1129
Score = 433 bits (1114), Expect = e-118, Method: Compositional matrix adjust.
Identities = 216/430 (50%), Positives = 294/430 (68%), Gaps = 10/430 (2%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQV----DGEGVARPVDVSKPNPNGMEFDNLYLDM 56
MGVPA +RWL+ +YP + V E+ P+ DGE V P+ PNPNG E DNLYLDM
Sbjct: 1 MGVPALFRWLSKKYPKIVERVKEDTPKKIRGPDGEIVEEPIRYENPNPNGFEVDNLYLDM 60
Query: 57 NGIIHPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQR 116
NGI+HPC HP+G+PAP + +++ IF Y + + + RPRK+L +AIDGVAPRAKMNQQR
Sbjct: 61 NGIVHPCTHPEGRPAPETEEEMMVEIFKYTERVVNMCRPRKVLMMAIDGVAPRAKMNQQR 120
Query: 117 TRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKE-KPETCDSNVITPGTQFMAVLSAAL 175
+RRFRAA++AA+ E E + K FE G +S + ++ D+N ITPGT FM +LS +L
Sbjct: 121 SRRFRAAQEAADKEEERKEAIKLFEAMGHAVSEETANHKSWDTNAITPGTPFMDLLSISL 180
Query: 176 QYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDA 235
+Y++ +L PGW+ K+ILSD++VPGEGEHKIM +IR QR+ P +D NT H +YGLDA
Sbjct: 181 KYWVSHKLTTDPGWKDLKIILSDSSVPGEGEHKIMDWIRRQRSYPTWDANTSHVIYGLDA 240
Query: 236 DLIMLSLATHEIHFSILREVITLPGQQ--EKCFVCGQVGHLAAECHGKPGDNPADWNGVD 293
DLIMLSLATHE HF +LRE + + C CG+VGH+AA C K D N V+
Sbjct: 241 DLIMLSLATHEPHFRVLREDVFAQSSKGPPACKNCGKVGHIAANC--KSDKKVKDPNVVE 298
Query: 294 DTPIHK-KKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMP 352
K + FL++ LREYL EL +P PFP + E +DD++F+ FFVGNDFLPH+P
Sbjct: 299 VAKTEDPKPFIFLDVACLREYLAIELVVPGVPFPFDLELAIDDWIFMIFFVGNDFLPHLP 358
Query: 353 TLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQ 412
+LEIREGAI++L+ ++R E MGGYLT+ G+V LDR + ++ +A ED+IFQKR +
Sbjct: 359 SLEIREGAIDVLLKIWRAELPRMGGYLTNHGKVNLDRAQVILEGLAKSEDEIFQKRKDDE 418
Query: 413 QAYEYNEAMK 422
+ E+++ +
Sbjct: 419 ERQEHSQKRR 428
Score = 216 bits (549), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 114/230 (49%), Positives = 144/230 (62%), Gaps = 10/230 (4%)
Query: 438 VAVADTVKLGEPGYKERYYADKF--EISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVC 495
V D VKL EPGY+ERYY KF ++S E IDKV K Y+EGLCWV YYYQ V
Sbjct: 682 VDYEDDVKLWEPGYRERYYEKKFGVKLSEREFIDKVTK----SYMEGLCWVLEYYYQGVP 737
Query: 496 SWQWFYPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMT 555
+W WFYPYHYAPFA D +D+ ++I F PF+PF QL+G PAAS LPE + LM
Sbjct: 738 AWDWFYPYHYAPFAQDFRDVGSMDIKFETSIPFKPFAQLLGVFPAASRIHLPEPLQTLMI 797
Query: 556 DPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSV 615
D SPI FYPPDF+IDMNGK+ AWQGV LPFID+ LL K E L+++E RNS
Sbjct: 798 DEDSPILDFYPPDFEIDMNGKKMAWQGVALLPFIDQNRLLTALKSKEELLSDDEKRRNSW 857
Query: 616 MLDLLYVHPQHPLYQQITLYCQLYHQLPPQD-RFAWEIDVNASGGMNGYI 664
+++++ ++PLY L+C + L +D ID AS G+ G +
Sbjct: 858 GDNVMFIANENPLYD---LFCDKLYGLRAKDVNKPIPIDTKASYGITGSV 904
>gi|134113168|ref|XP_774609.1| hypothetical protein CNBF2890 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|338819738|sp|P0CL89.1|XRN2_CRYNB RecName: Full=5'-3' exoribonuclease 2
gi|50257253|gb|EAL19962.1| hypothetical protein CNBF2890 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 1130
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 215/432 (49%), Positives = 293/432 (67%), Gaps = 14/432 (3%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQV----DGEGVARPVDVSKPNPNGMEFDNLYLDM 56
MGVPA +RWL+ +YP + V E+ P+ DGE V P+ PNPNG E DNLYLDM
Sbjct: 1 MGVPALFRWLSKKYPKIVERVKEDTPKKIRGPDGEIVEEPIRYENPNPNGFEVDNLYLDM 60
Query: 57 NGIIHPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQR 116
NGI+HPC HP+G+PAP + +++ IF Y + + + RPRK+L +AIDGVAPRAKMNQQR
Sbjct: 61 NGIVHPCTHPEGRPAPETEEEMMVEIFKYTERVVNMCRPRKVLMMAIDGVAPRAKMNQQR 120
Query: 117 TRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKE-KPETCDSNVITPGTQFMAVLSAAL 175
+RRFRAA++AA+ E E K FE G +S + ++ D+N ITPGT FM +LS +L
Sbjct: 121 SRRFRAAQEAADKEEERREAIKLFEAMGHAVSEETANHKSWDTNAITPGTPFMDLLSISL 180
Query: 176 QYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDA 235
+Y++ +L PGW+ K+ILSD++VPGEGEHKIM +IR QR+ P +D NT H +YGLDA
Sbjct: 181 KYWVSHKLTTDPGWKDLKIILSDSSVPGEGEHKIMDWIRRQRSYPTWDANTSHVIYGLDA 240
Query: 236 DLIMLSLATHEIHFSILREVITLPGQQ--EKCFVCGQVGHLAAECHGK---PGDNPADWN 290
DLIMLSLATHE HF +LRE + + C CG+VGH+AA C N A+
Sbjct: 241 DLIMLSLATHEPHFRVLREDVFAQSSKGPHACKNCGKVGHIAANCKSDKKFKDPNVAEVA 300
Query: 291 GVDDTPIHKKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPH 350
+D K + FL++ LREYL EL +P PFP + E +DD++F+ FFVGNDFLPH
Sbjct: 301 KTEDP----KPFIFLDVACLREYLAVELVVPGMPFPFDLELAIDDWIFMIFFVGNDFLPH 356
Query: 351 MPTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTR 410
+P+LEIREGAI++L+ ++R E MGGYLT+ G+V LDR + ++ +A ED+IFQKR
Sbjct: 357 LPSLEIREGAIDVLLKIWRAELPRMGGYLTNHGKVNLDRAQVILEGLAKSEDEIFQKRKD 416
Query: 411 IQQAYEYNEAMK 422
++ E+++ +
Sbjct: 417 DEERQEHSQKRR 428
Score = 216 bits (549), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 114/230 (49%), Positives = 144/230 (62%), Gaps = 10/230 (4%)
Query: 438 VAVADTVKLGEPGYKERYYADKF--EISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVC 495
V D VKL EPGY+ERYY KF ++S E IDKV K Y+EGLCWV YYYQ V
Sbjct: 683 VDYEDDVKLWEPGYRERYYEKKFGVKLSEREFIDKVTK----SYMEGLCWVLEYYYQGVP 738
Query: 496 SWQWFYPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMT 555
+W WFYPYHYAPFA D +D+ ++I F PF+PF QL+G PAAS LPE + LM
Sbjct: 739 AWDWFYPYHYAPFAQDFRDVGSMDIKFETSIPFKPFAQLLGVFPAASRIHLPEPLQTLMI 798
Query: 556 DPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSV 615
D SPI FYPPDF+IDMNGK+ AWQGV LPFID+ LL K E L+++E RNS
Sbjct: 799 DEDSPILDFYPPDFEIDMNGKKMAWQGVALLPFIDQNRLLTALKSKEELLSDDEKRRNSW 858
Query: 616 MLDLLYVHPQHPLYQQITLYCQLYHQLPPQD-RFAWEIDVNASGGMNGYI 664
+++++ ++PLY L+C + L +D ID AS G+ G +
Sbjct: 859 GDNVMFIANENPLYD---LFCDKLYGLRAKDVSKPIPIDTKASYGITGSV 905
>gi|58268722|ref|XP_571517.1| 5'-3' exoribonuclease [Cryptococcus neoformans var. neoformans
JEC21]
gi|338819739|sp|P0CL88.1|XRN2_CRYNJ RecName: Full=5'-3' exoribonuclease 2
gi|57227752|gb|AAW44210.1| 5'-3' exoribonuclease, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 1127
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 215/432 (49%), Positives = 293/432 (67%), Gaps = 14/432 (3%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQV----DGEGVARPVDVSKPNPNGMEFDNLYLDM 56
MGVPA +RWL+ +YP + V E+ P+ DGE V P+ PNPNG E DNLYLDM
Sbjct: 1 MGVPALFRWLSKKYPKIVERVKEDTPKKIRGPDGEIVEEPIRYENPNPNGFEVDNLYLDM 60
Query: 57 NGIIHPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQR 116
NGI+HPC HP+G+PAP + +++ IF Y + + + RPRK+L +AIDGVAPRAKMNQQR
Sbjct: 61 NGIVHPCTHPEGRPAPETEEEMMVEIFKYTERVVNMCRPRKVLMMAIDGVAPRAKMNQQR 120
Query: 117 TRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKE-KPETCDSNVITPGTQFMAVLSAAL 175
+RRFRAA++AA+ E E K FE G +S + ++ D+N ITPGT FM +LS +L
Sbjct: 121 SRRFRAAQEAADKEEERREAIKLFEAMGHAVSEETANHKSWDTNAITPGTPFMDLLSISL 180
Query: 176 QYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDA 235
+Y++ +L PGW+ K+ILSD++VPGEGEHKIM +IR QR+ P +D NT H +YGLDA
Sbjct: 181 KYWVSHKLTTDPGWKDLKIILSDSSVPGEGEHKIMDWIRRQRSYPTWDANTSHVIYGLDA 240
Query: 236 DLIMLSLATHEIHFSILREVITLPGQQ--EKCFVCGQVGHLAAECHGK---PGDNPADWN 290
DLIMLSLATHE HF +LRE + + C CG+VGH+AA C N A+
Sbjct: 241 DLIMLSLATHEPHFRVLREDVFAQSSKGPHACKNCGKVGHIAANCKSDKKFKDPNVAEVA 300
Query: 291 GVDDTPIHKKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPH 350
+D K + FL++ LREYL EL +P PFP + E +DD++F+ FFVGNDFLPH
Sbjct: 301 KTEDP----KPFIFLDVACLREYLAVELVVPGMPFPFDLELAIDDWIFMIFFVGNDFLPH 356
Query: 351 MPTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTR 410
+P+LEIREGAI++L+ ++R E MGGYLT+ G+V LDR + ++ +A ED+IFQKR
Sbjct: 357 LPSLEIREGAIDVLLKIWRAELPRMGGYLTNHGKVNLDRAQVILEGLAKSEDEIFQKRKD 416
Query: 411 IQQAYEYNEAMK 422
++ E+++ +
Sbjct: 417 DEERQEHSQKRR 428
Score = 217 bits (553), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 114/229 (49%), Positives = 144/229 (62%), Gaps = 11/229 (4%)
Query: 438 VAVADTVKLGEPGYKERYYADKF--EISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVC 495
V D VKL EPGY+ERYY KF ++S E IDKV K Y+EGLCWV YYYQ V
Sbjct: 683 VDYEDDVKLWEPGYRERYYEKKFGVKLSEREFIDKVTK----SYMEGLCWVLEYYYQGVP 738
Query: 496 SWQWFYPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMT 555
+W WFYPYHYAPFA D +D+ ++I F PF+PF QL+G PAAS LPE + LM
Sbjct: 739 AWDWFYPYHYAPFAQDFRDVGSMDIKFETSIPFKPFAQLLGVFPAASRIHLPEPLQTLMI 798
Query: 556 DPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSV 615
D SPI FYPPDF+IDMNGK+ AWQGV LPFID+ LL K E L+++E RNS
Sbjct: 799 DEDSPILDFYPPDFEIDMNGKKMAWQGVALLPFIDQNRLLTALKSKEELLSDDEKRRNSW 858
Query: 616 MLDLLYVHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVNASGGMNGYI 664
+++++ ++PLY L+C + L +D ID AS G+ G +
Sbjct: 859 GDNVMFIANENPLYD---LFCDKLYGLRAKDPIP--IDTKASYGITGSV 902
>gi|408399376|gb|EKJ78479.1| hypothetical protein FPSE_01288 [Fusarium pseudograminearum CS3096]
Length = 980
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 210/424 (49%), Positives = 284/424 (66%), Gaps = 7/424 (1%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MG+PA +RWL+ RYP I V+E+ P V +G PVD ++PNPNG EFDNLYLDMNGI+
Sbjct: 1 MGIPAAFRWLSTRYPKIISPVIEDQPLVMEDGSTIPVDTTRPNPNGEEFDNLYLDMNGIV 60
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ +PAPT +++ +F Y D + +VRPRK+L +A+DGVAPRAKMNQQR+RRF
Sbjct: 61 HPCSHPEDRPAPTDEEEMMMEVFRYTDRVVNMVRPRKILMIAVDGVAPRAKMNQQRSRRF 120
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETC-----DSNVITPGTQFMAVLSAAL 175
R+A++A E E +++ L K ++ + E ET DSN ITPGT FM +L+ +L
Sbjct: 121 RSAQEAQEKEQDKQELIKMLKQQNGGNLSTESLETVTKKAFDSNSITPGTPFMDILALSL 180
Query: 176 QYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDA 235
+Y+ Q +LN PGW K+I+SDA VPGEGEHKIM+++R QR P DPNTRH +YGLDA
Sbjct: 181 RYWCQYKLNTDPGWAKLKIIISDATVPGEGEHKIMNFVRSQRASPDHDPNTRHVIYGLDA 240
Query: 236 DLIMLSLATHEIHFSILREVITLPGQQEK-CFVCGQVGHLAAECHGKPGDNPADWNGVDD 294
DLIML LATHE HF +LRE + Q+ + C +CGQ GH A C G+ + + D
Sbjct: 241 DLIMLGLATHEPHFRVLREDVFFQDQKARLCKICGQKGHDAQNCRGEEKKKDGEHD-EKD 299
Query: 295 TPIHKKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTL 354
+ K + +L++ VLREYL EL +PN PF + ER VDD++F+C FVGNDFLPH+P L
Sbjct: 300 KGVALKPFIWLHVAVLREYLAVELGVPNLPFRFDLERAVDDWIFMCCFVGNDFLPHLPAL 359
Query: 355 EIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQA 414
EIRE I+ L +++ MGGY+T G + L+R + + +A ED IF++R +
Sbjct: 360 EIREHGIDTLTKIWKDNLPVMGGYVTKDGHIDLERAQVILDGLAQQEDNIFKRRKEQEDR 419
Query: 415 YEYN 418
E N
Sbjct: 420 REAN 423
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 102/254 (40%), Positives = 151/254 (59%), Gaps = 9/254 (3%)
Query: 442 DTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFY 501
D V+L E GY +RYY KF +P++I+ + V YVEGL WV YY+Q SW+W+Y
Sbjct: 560 DDVRLWEDGYADRYYEKKFH-KDPKDIE-FRHGVGRAYVEGLAWVLLYYFQGCPSWEWYY 617
Query: 502 PYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPI 561
PYHYAPFA+D KD++ + I+F G +PF+QLM LPAAS ALPE + +LM +P S I
Sbjct: 618 PYHYAPFAADFKDIAKMNISFEKGRVSKPFEQLMSVLPAASRHALPEVFHDLMLNPESNI 677
Query: 562 YKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLY 621
FYP DFQID+NGK+FAWQGV LPFI+ LL + L+ + RN + D+L
Sbjct: 678 IDFYPEDFQIDLNGKKFAWQGVALLPFIEMPRLLAAVQSKYPELSAADSARNEMGRDVLI 737
Query: 622 VHPQH-PLYQQITLYCQLYHQLPPQDRFAWEIDVNASGGMNGYIWLCERNGLRSIIPSPV 680
H LY ++ + Y + +F +++ S G++G + E S + P+
Sbjct: 738 FSEGHESLYDEV--LTKFYSKKQGDSKF--KLNPKKSDGLSGRVEKKEGYVPHSELKYPL 793
Query: 681 K--GLPDIERNQAM 692
+ +PD++ ++++
Sbjct: 794 ERNSMPDLDYDRSV 807
>gi|354468134|ref|XP_003496522.1| PREDICTED: 5'-3' exoribonuclease 2-like [Cricetulus griseus]
Length = 1045
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 211/385 (54%), Positives = 275/385 (71%), Gaps = 2/385 (0%)
Query: 32 GVARPVDVSKPNPNGMEFDNLYLDMNGIIHPCFHPDGKPAPTSYDDVFKSIFDYIDHIFL 91
GV PVD SKPNPN +EFDNLYLDMNGIIHPC HP+ KPAP + D++ +IF+YID +F
Sbjct: 105 GVKIPVDASKPNPNDVEFDNLYLDMNGIIHPCTHPEDKPAPKNEDEMMVAIFEYIDRLFN 164
Query: 92 LVRPRKLLYLAIDGVAPRAKMNQQRTRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKE 151
+VRPR+LLY+AIDGVAPRAKMNQQR+RRFRA+K+ EA E++R+R+E G L +E
Sbjct: 165 IVRPRRLLYMAIDGVAPRAKMNQQRSRRFRASKEGMEAAVEKQRVREEILAKGGFLPPEE 224
Query: 152 KPETCDSNVITPGTQFMAVLSAALQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMS 211
E DSN ITPGT+FM L+ L+Y+I RLN PGW+ VILSDA+ PGEGEHKIM
Sbjct: 225 IKERFDSNCITPGTEFMDNLAKCLRYYIADRLNNDPGWKNLTVILSDASAPGEGEHKIMD 284
Query: 212 YIRLQRNLPGFDPNTRHCLYGLDADLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQV 271
YIR QR P DPNT HCL G DADLIML LATHE +F+I+RE P + + C +C Q
Sbjct: 285 YIRRQRAQPNHDPNTHHCLCGADADLIMLGLATHEPNFTIIREEFK-PNKPKPCALCNQF 343
Query: 272 GHLAAECHGKPGDNPADWNGVDDT-PIHKKKYQFLNIWVLREYLQYELDIPNPPFPINFE 330
GH +C G P + + + D+ P + ++ F+ + VLREYL+ EL + + PFP + E
Sbjct: 344 GHEVKDCEGLPREKKGKHDELADSLPCAEGEFIFIRLNVLREYLERELTMASLPFPFDVE 403
Query: 331 RIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRV 390
R +DD+VF+CFFVGNDFLPH+P+LEIREGAI+ L+++Y+ GGYLT++G V L RV
Sbjct: 404 RSIDDWVFMCFFVGNDFLPHLPSLEIREGAIDRLVNIYKNVVHKTGGYLTESGYVNLQRV 463
Query: 391 EKFIQSVAVYEDQIFQKRTRIQQAY 415
+ + +V ED IF+KR + ++
Sbjct: 464 QMIMLAVGEVEDSIFKKRKDDEDSF 488
Score = 185 bits (470), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 112/278 (40%), Positives = 152/278 (54%), Gaps = 37/278 (13%)
Query: 442 DTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFY 501
D V+L E G+K+RYY +KF++ +E K ++ VV YVEGLCWV RYYYQ SW+W+Y
Sbjct: 579 DNVRLWEAGWKQRYYKNKFDVDAADE--KFRRKVVQSYVEGLCWVLRYYYQGCASWKWYY 636
Query: 502 PYHYAPFASDLKDLSDLEITFFLG-EPFRPFDQLMGTLPAASSSALPEKYRNLMTD---- 556
P+HYAPFASD + ++D+ F G +PF+P +QLMG PAAS + LP +RN +
Sbjct: 637 PFHYAPFASDFEGIADMSSEFEKGTKPFKPLEQLMGVFPAASGNFLPPSWRNSRENIRQG 696
Query: 557 -------------------PSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQ 597
S I FYP DF ID+NGK++AWQGV LPF+DE+ L
Sbjct: 697 LRETSLRFLVESIAVCSHSQDSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAA 756
Query: 598 TKKLEVFLTEEELFRNSVMLDLLYVHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDV--N 655
+++ LT EE RNS+ D+++V HPL+ I Q P IDV
Sbjct: 757 LEEVYPDLTPEENRRNSLGGDVMFVGKLHPLHDFILELYQTGSTEP--------IDVPPE 808
Query: 656 ASGGMNGYIWLCERNGL-RSIIPSPVKGLPDIERNQAM 692
G+ G L E L + SPV L D+ +N A+
Sbjct: 809 LCHGIQGKFSLDEEAILPDQTVCSPVPMLRDLTQNTAV 846
>gi|342889646|gb|EGU88669.1| hypothetical protein FOXB_00813 [Fusarium oxysporum Fo5176]
Length = 3523
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 208/424 (49%), Positives = 285/424 (67%), Gaps = 7/424 (1%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MG+PA +RWL+ RYP I V+E+ P +G PVD ++PNPNG EFDNLYLDMNGI+
Sbjct: 1 MGIPAAFRWLSSRYPKIISPVIEDQPLTMEDGSTIPVDTTRPNPNGEEFDNLYLDMNGIV 60
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ +PAP +++ +F Y D + +VRPRK+L +A+DGVAPRAKMNQQR+RRF
Sbjct: 61 HPCSHPEDRPAPKDEEEMMMEVFRYTDRVVNMVRPRKILMIAVDGVAPRAKMNQQRSRRF 120
Query: 121 RAAKDAAEAEAEEERLRKEFEE--AGKLLSAKEKP---ETCDSNVITPGTQFMAVLSAAL 175
R+A++A E E +++ L K ++ G L + E+ + DSN ITPGT FM +L+ +L
Sbjct: 121 RSAQEAQEKEKDKQELIKLLKQQNGGNLTAESEETVLKKAFDSNSITPGTPFMDILALSL 180
Query: 176 QYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDA 235
+Y+ Q +LN PGW K+I+SDA VPGEGEHKIM+++R QR P DPNTRH +YGLDA
Sbjct: 181 RYWCQYKLNTDPGWAKLKIIISDATVPGEGEHKIMNFVRSQRASPDHDPNTRHVIYGLDA 240
Query: 236 DLIMLSLATHEIHFSILREVITLPGQQEK-CFVCGQVGHLAAECHGKPGDNPADWNGVDD 294
DLIML LATHE HF +LRE + Q+ + C +CGQ GH A C G+ + + D
Sbjct: 241 DLIMLGLATHEPHFRVLREDVFFQEQKARLCKLCGQKGHDAQNCRGEEKKKDGEHDE-KD 299
Query: 295 TPIHKKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTL 354
+ K + +L++ VLREYL+ EL +PN PF + ER VDD++F+C FVGNDFLPH+P L
Sbjct: 300 KGVALKPFIWLHVAVLREYLEVELSVPNLPFRFDVERAVDDWIFMCCFVGNDFLPHLPAL 359
Query: 355 EIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQA 414
EIRE I+ L +++ MGGY+T G + L+R + + +A ED IF++R +
Sbjct: 360 EIREHGIDTLTKIWKDNLPVMGGYVTKDGHIDLERAQVILSGLAKQEDGIFKRRKEQEDR 419
Query: 415 YEYN 418
E N
Sbjct: 420 REAN 423
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 94/224 (41%), Positives = 135/224 (60%), Gaps = 7/224 (3%)
Query: 442 DTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFY 501
D V+L E GY +RYY KF +P++I+ + +V YVEGL WV YY+Q SW+W+Y
Sbjct: 559 DDVRLWEDGYADRYYEKKFH-KDPQDIE-FRHEVARAYVEGLAWVLLYYFQGCPSWEWYY 616
Query: 502 PYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPI 561
PYHYAPFA+D +D+ ++I+F G +PF+QLM LPAAS ALPE + +LM +P S I
Sbjct: 617 PYHYAPFAADFQDIDKMKISFEKGRISKPFEQLMSVLPAASRHALPEVFHDLMLNPESNI 676
Query: 562 YKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLY 621
FYP DF+ID+NGK+ AWQGV LPFI+ LL + L+ + RN + D+L
Sbjct: 677 IDFYPEDFEIDLNGKKMAWQGVALLPFIEMPRLLAAVQAKYPELSAADSARNEMGRDVLI 736
Query: 622 VHPQH-PLYQQITLYCQLYHQLPPQDRFAWEIDVNASGGMNGYI 664
H LY + + Y + +F +++ S G++G +
Sbjct: 737 FSEAHESLYDDV--LTKFYSKKQGDSKF--KLNPKKSDGLSGKV 776
>gi|327302674|ref|XP_003236029.1| 5'-3' exoribonuclease [Trichophyton rubrum CBS 118892]
gi|326461371|gb|EGD86824.1| 5'-3' exoribonuclease [Trichophyton rubrum CBS 118892]
Length = 1034
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 214/413 (51%), Positives = 286/413 (69%), Gaps = 12/413 (2%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQ-VDGEGVARPVDVSKPNPNGMEFDNLYLDMNGI 59
MGVPA +RWL+ +YP + VVEE PQ +DG+ + PVD++KPNPNG E DNLYLDMNGI
Sbjct: 1 MGVPALFRWLSSKYPKIVSAVVEEQPQEIDGQEI--PVDITKPNPNGEEMDNLYLDMNGI 58
Query: 60 IHPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRR 119
+HPC HP+GKP P + ++ IF Y D + +VRPRK+L +A+DGVAPRAKMNQQR+RR
Sbjct: 59 VHPCTHPEGKPPPANEGEMMLEIFKYTDRVVNMVRPRKVLMIAVDGVAPRAKMNQQRSRR 118
Query: 120 FRAAKDAA---EAEAEEERLRKEFEEAGKLLSAKEK--PETCDSNVITPGTQFMAVLSAA 174
FR+A+DA E + E +L K+ + K ++ E+ +T D+NVITPGT FM +L+ A
Sbjct: 119 FRSAQDAKAEDEKKVEFAKLLKKQKRGKKDVTVAEEVITKTWDTNVITPGTPFMDILALA 178
Query: 175 LQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLD 234
L+Y++ +L+ PGW+ KVI+SDA VPGEGEHKIM +IR QR P +DPNTRH +YGLD
Sbjct: 179 LRYWVAYKLSTDPGWEKLKVIISDATVPGEGEHKIMEFIRSQRACPEYDPNTRHVIYGLD 238
Query: 235 ADLIMLSLATHEIHFSILRE-VITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWN-GV 292
ADLIML L THE HF +LRE V + C +CGQ GH+ C GK + +++
Sbjct: 239 ADLIMLGLGTHEPHFRVLREDVFFQESKARTCKLCGQAGHVEEACTGKAKEKRGEFDEKQ 298
Query: 293 DDTPIHKKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMP 352
P+ K + +L++ VLREYL E+ +P PFP + ER +DD+VF+CFFVGNDFLPH+P
Sbjct: 299 KGNPL--KPFIWLHVSVLREYLAVEMQVPQQPFPFDLERALDDWVFMCFFVGNDFLPHLP 356
Query: 353 TLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIF 405
+LEIRE I+ L+ ++R MGGYLT G V L + + +Q +A ED IF
Sbjct: 357 SLEIRENGIDTLIAIWRDNIPQMGGYLTKDGRVDLAKAQLILQGLAKQEDAIF 409
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 102/192 (53%), Positives = 134/192 (69%), Gaps = 2/192 (1%)
Query: 442 DTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFY 501
DTV+L E GY +RYY KF + NP++I + V YVEGL WV YY+Q SW W+Y
Sbjct: 574 DTVRLWEDGYADRYYEQKFGV-NPKDI-AFRHKVARAYVEGLSWVLLYYFQGCPSWTWYY 631
Query: 502 PYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPI 561
PYHYAPFA+D D+ +++ F G PF+PF+QLMG LPAAS+ A+PE +R+LM+D +S I
Sbjct: 632 PYHYAPFAADFVDIGKMDVQFTKGTPFKPFEQLMGVLPAASNHAIPEVFRDLMSDENSEI 691
Query: 562 YKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLY 621
FYP DF +D+NGK+FAWQGV LPFIDEK LL K L+EEE RN++ D+L
Sbjct: 692 IDFYPEDFPVDLNGKKFAWQGVALLPFIDEKRLLAAMDKRYHLLSEEEQARNAMGKDVLL 751
Query: 622 VHPQHPLYQQIT 633
+ +HPLY+ +T
Sbjct: 752 LSEKHPLYESLT 763
>gi|302509948|ref|XP_003016934.1| hypothetical protein ARB_05228 [Arthroderma benhamiae CBS 112371]
gi|291180504|gb|EFE36289.1| hypothetical protein ARB_05228 [Arthroderma benhamiae CBS 112371]
Length = 1038
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 214/413 (51%), Positives = 286/413 (69%), Gaps = 12/413 (2%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQ-VDGEGVARPVDVSKPNPNGMEFDNLYLDMNGI 59
MGVPA +RWL+ +YP + VVEE PQ +DG+ + PVD++KPNPNG E DNLYLDMNGI
Sbjct: 1 MGVPALFRWLSSKYPKIVSAVVEEQPQEIDGQEI--PVDITKPNPNGEEMDNLYLDMNGI 58
Query: 60 IHPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRR 119
+HPC HP+GKP P + ++ IF Y D + +VRPRK+L +A+DGVAPRAKMNQQR+RR
Sbjct: 59 VHPCTHPEGKPPPANEGEMMLEIFKYTDRVVNMVRPRKVLMIAVDGVAPRAKMNQQRSRR 118
Query: 120 FRAAKDAA---EAEAEEERLRKEFEEAGKLLSAKEK--PETCDSNVITPGTQFMAVLSAA 174
FR+A+DA E + E +L K+ + K ++ E+ +T D+NVITPGT FM +L+ A
Sbjct: 119 FRSAQDAKAEDEKKVEFAKLLKKQKRGKKDVTITEEVITKTWDTNVITPGTPFMDILALA 178
Query: 175 LQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLD 234
L+Y++ +L+ PGW+ KVI+SDA VPGEGEHKIM +IR QR P +DPNTRH +YGLD
Sbjct: 179 LRYWVAYKLSTDPGWEKLKVIISDATVPGEGEHKIMEFIRSQRACPEYDPNTRHVIYGLD 238
Query: 235 ADLIMLSLATHEIHFSILRE-VITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWN-GV 292
ADLIML L THE HF +LRE V + C +CGQ GH+ C GK + +++
Sbjct: 239 ADLIMLGLGTHEPHFRVLREDVFFQESKARTCKLCGQAGHVEEACTGKAKEKRGEFDEKQ 298
Query: 293 DDTPIHKKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMP 352
P+ K + +L++ VLREYL E+ +P PFP + ER +DD+VF+CFFVGNDFLPH+P
Sbjct: 299 KGNPL--KPFIWLHVSVLREYLAVEMQVPQQPFPFDLERALDDWVFMCFFVGNDFLPHLP 356
Query: 353 TLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIF 405
+LEIRE I+ L+ ++R MGGYLT G V L + + +Q +A ED IF
Sbjct: 357 SLEIRENGIDTLIAIWRDNIPQMGGYLTKDGRVDLAKAQLILQGLAKQEDAIF 409
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 102/192 (53%), Positives = 135/192 (70%), Gaps = 2/192 (1%)
Query: 442 DTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFY 501
DTV+L E GY +RYY KF +S P++I + V YVEGL WV YY+Q SW W+Y
Sbjct: 574 DTVRLWEDGYADRYYEQKFGVS-PKDI-AFRHKVARAYVEGLSWVLLYYFQGCPSWTWYY 631
Query: 502 PYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPI 561
PYHYAPFA+D D+ ++++ F G PF+PF+QLMG LPAAS+ A+PE +R+LM+D +S I
Sbjct: 632 PYHYAPFAADFVDIGEMDVQFTKGTPFKPFEQLMGVLPAASNHAIPEVFRDLMSDENSEI 691
Query: 562 YKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLY 621
FYP DF +D+NGK+FAWQGV LPFIDEK LL K L+EEE RN++ D+L
Sbjct: 692 IDFYPEDFPVDLNGKKFAWQGVALLPFIDEKRLLAAMGKRYHLLSEEEQARNAMGKDVLL 751
Query: 622 VHPQHPLYQQIT 633
+ +HPLY+ +T
Sbjct: 752 LSEKHPLYESLT 763
>gi|159115185|ref|XP_001707816.1| 5'-3' exoribonuclease 2 [Giardia lamblia ATCC 50803]
gi|157435923|gb|EDO80142.1| 5'-3' exoribonuclease 2 [Giardia lamblia ATCC 50803]
Length = 902
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 269/716 (37%), Positives = 386/716 (53%), Gaps = 109/716 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDP-----QVDGEGVARPVDVSKPNPNGMEFDNLYLD 55
MGVP+F+RW+ RY I +V+E P +DG + P G DNLY D
Sbjct: 1 MGVPSFFRWIVQRYGSVIDNVIEALPDTYEANIDGGAL----------PLGFAIDNLYFD 50
Query: 56 MNGIIHPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQ 115
NG+IHPCFHP+G+P P + +VF+ IF ID + + RPR+LLYLA+DG APRAK+NQQ
Sbjct: 51 TNGLIHPCFHPEGRPQPETEAEVFEEIFQVIDRVVSICRPRRLLYLAVDGPAPRAKLNQQ 110
Query: 116 RTRRFRAAKD-AAEAEAEEERL-------------RKEFEEAGKLLSAKEKPETCDSNVI 161
R+RRF AA + + A+E RL + FEE + ++ E DSN I
Sbjct: 111 RSRRFMAAYERQIKQRAQERRLMNMNLGDAEPSLKKLSFEEGNAMDTSTEN--VLDSNAI 168
Query: 162 TPGTQFMAVLSAALQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPG 221
TPGT FM+ LS AL+Y++ R W+ V+ +DA PGEGEHKIMS++R+QR+ PG
Sbjct: 169 TPGTPFMSRLSVALKYYVANRQANSKLWRHLTVLYADAWSPGEGEHKIMSFVRIQRSQPG 228
Query: 222 FDPNTRHCLYGLDADLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGK 281
+DP T HC+YGLDADLIML+L THE +F ILR+V+ + C C GHL +
Sbjct: 229 YDPCTVHCIYGLDADLIMLALGTHEPNFLILRDVVDTDNLKRTCTRC---GHLRVSSEYR 285
Query: 282 PG------DNPADWNGVDDTPIH----------KKKYQFLNIWVLREYLQYELDIPNPPF 325
G D G+ D P + + +QFL++ LREYLQ E D +
Sbjct: 286 TGTVDPFTTRHEDQGGI-DCPFYPGSSLRPVAFRSPFQFLHVSRLREYLQREFDAAD--- 341
Query: 326 PINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHVYRR-EFTAMGGYLTDAGE 384
+ FER +DDFVFL F VGNDFLPH+ L+IRE A+ +++ Y++ + + G+LT +
Sbjct: 342 -VIFERAIDDFVFLTFLVGNDFLPHIQCLDIREDAVIRMIYFYKQLKRSRKIGFLTTGSD 400
Query: 385 VLLDRVEKFIQSVAVYEDQIFQKR---------TRIQQA-------------YEYNEAMK 422
V ++ + F++ +A E +IF+ R ++I +A EY + K
Sbjct: 401 VNMEDLHIFLKELAEQEARIFRARASGKLNARHSQISEAPDTKDETPGERAIREYFQFFK 460
Query: 423 LNARRESSE------ELLQAP-----VAVADTV---KLGEPGYKERYY-----ADKFEIS 463
+ +R + L P VAV + +L +PGY +RYY D F +
Sbjct: 461 RDDKRMIKDAIDDYCNLHDKPLPPTVVAVKHILIKYELEKPGYAQRYYLGIGLMDDFPET 520
Query: 464 NPE------EIDKVKKDVVLKYVEGLCWVCRYYY-QDVCSWQWFYPYHYAPFASDLKDLS 516
N E E+ K + + Y++GL WV RYY+ V W W+YPYH++P +DL S
Sbjct: 521 NQESDTFKAELRKRIQTMCYHYIDGLIWVFRYYFLPKVEDWGWYYPYHHSPLLADLASAS 580
Query: 517 DLEITFF-----LGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQI 571
+ PF P++QL+ +P AS++ LP R LMTDP+S + KFYP +
Sbjct: 581 QTYTRTWKQHTVSNRPFNPYEQLLAVMPPASAALLPPVMRCLMTDPASILNKFYPSLIKC 640
Query: 572 DMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVHPQHP 627
D++ K W+GV+ LPFI+ L+ +K LT E RN + ++ +H HP
Sbjct: 641 DLSEKTALWKGVLLLPFINSSELISAAQKSYDQLTPLEQQRNRLSDPIILIHKDHP 696
>gi|195338777|ref|XP_002036000.1| GM16241 [Drosophila sechellia]
gi|194129880|gb|EDW51923.1| GM16241 [Drosophila sechellia]
Length = 464
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 229/446 (51%), Positives = 294/446 (65%), Gaps = 9/446 (2%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPV--DVSKPNPNGMEFDNLYLDMNG 58
MGVPAF+RWL+ +YP I++ E+ QVD + R + D + PNPNG+EFDNLYLDMNG
Sbjct: 1 MGVPAFFRWLSRKYPSVIIEC-NENKQVDAD-TGRNIYEDATLPNPNGIEFDNLYLDMNG 58
Query: 59 IIHPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
IIHPC HP+ KPAP + D++ +IF+ ID +F +VRPRKLLY+AIDGVAPRAKMNQQR+R
Sbjct: 59 IIHPCTHPEDKPAPKNEDEMMVAIFECIDRLFGIVRPRKLLYMAIDGVAPRAKMNQQRSR 118
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAG-KLLSAKEKPETCDSNVITPGTQFMAVLSAALQY 177
RFRAAK+ E E R+R+E G KL KEK + DSN ITPGT FM LS L Y
Sbjct: 119 RFRAAKETTEKRLEVARIREELLSRGCKLPPEKEKGDHFDSNCITPGTPFMDRLSKCLHY 178
Query: 178 FIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADL 237
F+ RLN P W+ KVILSDANVPGEGEHKIM YIR QR P DPNT+H L G DADL
Sbjct: 179 FVHDRLNNNPAWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHVLCGADADL 238
Query: 238 IMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPI 297
IML LATHE +F+I+RE LP + C +C GH +C G P N D PI
Sbjct: 239 IMLGLATHEPNFTIIREEF-LPNKPRPCDICNGFGHEMDKCVGLGATAPTSANFKPDVPI 297
Query: 298 HKK-KYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEI 356
+ K+ F+ + VLREYL+ L++PN PF +FER +DD+VF+CFFVGNDFLPH+P+LEI
Sbjct: 298 GAEVKFIFVRLSVLREYLKQTLEMPNLPFEYSFERALDDWVFMCFFVGNDFLPHLPSLEI 357
Query: 357 REGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYE 416
REG ++ L+ +Y++ G G DRV+ + + EDQIF+ R R ++ ++
Sbjct: 358 REGTVDRLVELYKK-CVYRQGLSHRLGRCKSDRVQLIMTDLGNAEDQIFKSRQRREEQFK 416
Query: 417 -YNEAMKLNARRESSEELLQAPVAVA 441
++A K R + L Q+ +
Sbjct: 417 ARDKARKRQERNQDHGSLNQSAFGAS 442
>gi|302663765|ref|XP_003023520.1| hypothetical protein TRV_02267 [Trichophyton verrucosum HKI 0517]
gi|291187523|gb|EFE42902.1| hypothetical protein TRV_02267 [Trichophyton verrucosum HKI 0517]
Length = 1037
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 214/413 (51%), Positives = 286/413 (69%), Gaps = 12/413 (2%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQ-VDGEGVARPVDVSKPNPNGMEFDNLYLDMNGI 59
MGVPA +RWL+ +YP + VVEE PQ +DG+ + PVD++KPNPNG E DNLYLDMNGI
Sbjct: 1 MGVPALFRWLSSKYPKIVSAVVEEQPQEIDGQEI--PVDITKPNPNGEEMDNLYLDMNGI 58
Query: 60 IHPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRR 119
+HPC HP+GKP P + ++ IF Y D + +VRPRK+L +A+DGVAPRAKMNQQR+RR
Sbjct: 59 VHPCTHPEGKPPPANEGEMMLEIFKYTDRVVNMVRPRKVLMIAVDGVAPRAKMNQQRSRR 118
Query: 120 FRAAKDAA---EAEAEEERLRKEFEEAGKLLSAKEK--PETCDSNVITPGTQFMAVLSAA 174
FR+A+DA E + E +L K+ + K ++ E+ +T D+NVITPGT FM +L+ A
Sbjct: 119 FRSAQDAKAEDEKKVEFAKLLKKQKRGKKDVTITEEVITKTWDTNVITPGTPFMDILALA 178
Query: 175 LQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLD 234
L+Y++ +L+ PGW+ KVI+SDA VPGEGEHKIM +IR QR P +DPNTRH +YGLD
Sbjct: 179 LRYWVAYKLSTDPGWEKLKVIISDATVPGEGEHKIMEFIRSQRACPEYDPNTRHVIYGLD 238
Query: 235 ADLIMLSLATHEIHFSILRE-VITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWN-GV 292
ADLIML L THE HF +LRE V + C +CGQ GH+ C GK + +++
Sbjct: 239 ADLIMLGLGTHEPHFRVLREDVFFQESKARTCKLCGQAGHVEEACTGKAKEKRGEFDEKQ 298
Query: 293 DDTPIHKKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMP 352
P+ K + +L++ VLREYL E+ +P PFP + ER +DD+VF+CFFVGNDFLPH+P
Sbjct: 299 KGNPL--KPFIWLHVSVLREYLAVEMQVPQQPFPFDLERALDDWVFMCFFVGNDFLPHLP 356
Query: 353 TLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIF 405
+LEIRE I+ L+ ++R MGGYLT G V L + + +Q +A ED IF
Sbjct: 357 SLEIRENGIDTLIAIWRDNIPQMGGYLTKDGRVDLAKAQLILQGLAKQEDAIF 409
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 102/192 (53%), Positives = 135/192 (70%), Gaps = 2/192 (1%)
Query: 442 DTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFY 501
DTV+L E GY +RYY KF +S P++I + V YVEGL WV YY+Q SW W+Y
Sbjct: 574 DTVRLWEDGYADRYYEQKFGVS-PKDI-AFRHKVARAYVEGLSWVLLYYFQGCPSWTWYY 631
Query: 502 PYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPI 561
PYHYAPFA+D D+ ++++ F G PF+PF+QLMG LPAAS+ A+PE +R+LM+D +S I
Sbjct: 632 PYHYAPFAADFVDIGEMDVQFTKGTPFKPFEQLMGVLPAASNHAIPEVFRDLMSDENSEI 691
Query: 562 YKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLY 621
FYP DF +D+NGK+FAWQGV LPFIDEK LL K L+EEE RN++ D+L
Sbjct: 692 IDFYPEDFPVDLNGKKFAWQGVALLPFIDEKRLLAAMDKRYHLLSEEEQARNAMGKDVLL 751
Query: 622 VHPQHPLYQQIT 633
+ +HPLY+ +T
Sbjct: 752 LSEKHPLYESLT 763
>gi|322801303|gb|EFZ21990.1| hypothetical protein SINV_11797 [Solenopsis invicta]
Length = 1572
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 251/651 (38%), Positives = 357/651 (54%), Gaps = 102/651 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP F+R++++RYP + +VV+E Q+ EFD LYLDMNGII
Sbjct: 1 MGVPKFFRYISERYP-CLSEVVKEH-QIP------------------EFDYLYLDMNGII 40
Query: 61 HPCFHP-DGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRR 119
H C HP D S + +FK+IF YI+ +F ++RP+KL ++AIDGVAPRAK+NQQR RR
Sbjct: 41 HTCSHPNDDICFRISEEMMFKNIFHYIEVLFNMIRPQKLFFMAIDGVAPRAKINQQRGRR 100
Query: 120 FRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKP--ETCDSNVITPGTQFMAVLSAALQY 177
FR+AKDA E +EA + + P + DSN ITPGT FMA L L+
Sbjct: 101 FRSAKDA------------EIQEAKAIAKGVQIPTEKRFDSNCITPGTLFMAKLGDLLKR 148
Query: 178 FIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADL 237
F++ +++ GW+ K++ S A VPGEGEHKIM YIR + +D N+RHCLYGLDADL
Sbjct: 149 FVEYKISVDEGWKKCKILFSGAEVPGEGEHKIMDYIRYMKASEDYDSNSRHCLYGLDADL 208
Query: 238 IMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPI 297
IML L +HE +FS+LRE + QQ V TP
Sbjct: 209 IMLGLCSHEPNFSLLREEVKFGKQQ-----------------------------VKTTP- 238
Query: 298 HKKKYQFLNIWVLREYLQYELD--IPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLE 355
+ K+ L++ +LR+Y+++E FP + E+I+DD+V + F VGNDF+PH+P L
Sbjct: 239 EETKFCLLHLSLLRKYIEHEFSPIKDKLSFPFDIEKIIDDWVLMGFLVGNDFIPHLPNLH 298
Query: 356 IREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAY 415
I GA+ +L Y + GY+ +AG + LDR EKF++ ++ + + F + + +
Sbjct: 299 IANGALPILYRAYMEVLPTLEGYINEAGTLQLDRFEKFMEKLSRLDVEQFNEHYADIKFF 358
Query: 416 EYNEAMKLNARRESSEELLQAPVAV---------------------------------AD 442
E + N + L+ +V +D
Sbjct: 359 EAKTGRRPNESERHVYKKLEDSNSVSPKKTQNKDLDALIKSTTEMYRDMDLMIDDESDSD 418
Query: 443 TVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYP 502
+ +K+ YY +K E N +E +V + YV + W YYY CSW W+YP
Sbjct: 419 IYNMEFVQHKKDYYMNKLEYENVDE--EVLRSQAEGYVRAIQWNLHYYYHGCCSWSWYYP 476
Query: 503 YHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIY 562
+HYAP+ SD+KD DL++ F LGEPF PF QL+ LPA S + LP+ +++L+T+ SSPI
Sbjct: 477 HHYAPYISDIKDFKDLKLEFELGEPFLPFQQLLAVLPAYSKALLPDAFQSLLTEESSPII 536
Query: 563 KFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRN 613
+YP +F+ D+NGKR W+ VV +PFIDEKLLL + LT EE RN
Sbjct: 537 SYYPHNFKTDLNGKRQEWEAVVLIPFIDEKLLLSAMQPHLSRLTMEEQARN 587
>gi|301762972|ref|XP_002916907.1| PREDICTED: LOW QUALITY PROTEIN: 5'-3' exoribonuclease 1-like
[Ailuropoda melanoleuca]
Length = 1703
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 249/653 (38%), Positives = 361/653 (55%), Gaps = 103/653 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP FYRW+++RYP + +VV+E Q+ EFDNLYLDMNGII
Sbjct: 1 MGVPKFYRWISERYPC-LSEVVKEH-QIP------------------EFDNLYLDMNGII 40
Query: 61 HPCFHPDGKPAP--TSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C HP+ S D +F IF Y++ +F +++PRK+ ++A+DGVAPRAKMNQQR R
Sbjct: 41 HQCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RFR+AK+A E++++K E+ G+ L + + DSN ITPGT+FMA L L+YF
Sbjct: 101 RFRSAKEA------EDKIKKALEK-GETLPTEAR---FDSNCITPGTEFMARLHEHLKYF 150
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
+ +++ G + S PGEGEHKIM +IR ++ P DPNTRHCLYGLDADLI
Sbjct: 151 VNMKISTXQG---VTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLI 207
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
ML L +HE HFS+LRE + G++ + VC ++T H
Sbjct: 208 MLGLTSHEAHFSLLREEVRFGGKKTQ-RVCAP----------------------EETTFH 244
Query: 299 KKKYQFLNIWVLREYLQYELDI--PNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEI 356
L++ ++REY+ YE + F + ERI+DD++ + F VGNDF+PH+P L I
Sbjct: 245 -----LLHLSLMREYIDYEFSVLKDKITFKYDIERIIDDWILMGFLVGNDFIPHLPHLHI 299
Query: 357 REGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQK--------R 408
A+ LL Y +GGY+ ++G + L R EK++ ++ ++ + F +
Sbjct: 300 NHDALPLLYGTYITILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSEVFVDLKWFE 359
Query: 409 TRIQQAY----------------------EYNEAMKLNARRESSEELLQAPVAVADTVKL 446
+++ Y A+ A ++ EE++ + + D +
Sbjct: 360 SKVGNKYLNEAAGVAAEEAKNYKEKKKSKGQENAICWAALDKNGEEVVTSKDNLEDETED 419
Query: 447 GE------PGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWF 500
+ YK YY K + D D YV+ + W+ YYY V SW W+
Sbjct: 420 DDLFETEFRQYKRTYYMTKMGVDVVS--DDFLADQAACYVQAIQWILHYYYHGVQSWSWY 477
Query: 501 YPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSP 560
YPYHYAPF SD++++S L+I F LG+PF+PF+QL+ LPAAS + LP Y++LMT SP
Sbjct: 478 YPYHYAPFLSDIRNISTLKIHFELGKPFKPFEQLLAVLPAASKNLLPTCYQHLMTSEDSP 537
Query: 561 IYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRN 613
I ++YPPDF+ D+NGK+ W+ VV +PFIDEK LL + L +EE RN
Sbjct: 538 IIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEERKRN 590
>gi|341884867|gb|EGT40802.1| hypothetical protein CAEBREN_29959 [Caenorhabditis brenneri]
Length = 992
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 228/449 (50%), Positives = 297/449 (66%), Gaps = 31/449 (6%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPAF+RWL +YP +IV+ E+ ++D +G P+D ++PNPN EFDNLYLDMNGII
Sbjct: 1 MGVPAFFRWLTKKYPATIVNANEDRQRLD-DGRRAPIDCTQPNPNFQEFDNLYLDMNGII 59
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ +P P + D++F IF+YID IF +VRPR+LLY+AIDGVAPRAKMNQQR+RRF
Sbjct: 60 HPCTHPEDRPPPKNEDEMFALIFEYIDRIFSIVRPRRLLYMAIDGVAPRAKMNQQRSRRF 119
Query: 121 RAAKDAAEAEAE-EERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFI 179
RA+K+ AE A EE+ R+ E + KE+ DSN ITPGT FMA L+ AL+Y+I
Sbjct: 120 RASKEMAEKAASIEEQRRRLMAEGIAVPPKKEEEAHFDSNCITPGTPFMARLADALRYYI 179
Query: 180 QARLNQIPGW------------------QFTK-------VILSDANVPGEGEHKIMSYIR 214
R+ W +F+K +ILSDANVPGEGEHKIM YIR
Sbjct: 180 HDRITNDAAWANIEFIPRIPRNYHQSYPEFSKFIEINFQIILSDANVPGEGEHKIMDYIR 239
Query: 215 LQRNLPGFDPNTRHCLYGLDADLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHL 274
QR P DPNT HCL G DADLIML +ATHE +F+I+RE +P Q C +CGQ GH
Sbjct: 240 KQRGNPAHDPNTVHCLCGADADLIMLGIATHEANFNIIREEF-VPNQPRACDLCGQYGHE 298
Query: 275 AAECHGKPGDNPADWNGVDDTPIHKKK-YQFLNIWVLREYLQYELDIPNPPFPINFERIV 333
EC G +N D P ++K + FL I VLREYL+ E+ +PN PF + ER +
Sbjct: 299 LKECRG--AENDTDLGDDYCKPEQREKNFIFLRIPVLREYLEKEMAMPNLPFQFDLERAL 356
Query: 334 DDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKF 393
DD+VFLCFFVGNDFLPH+P+LEIREGAI+ L+ +Y+ M GYLT G LDRVE
Sbjct: 357 DDWVFLCFFVGNDFLPHLPSLEIREGAIDRLIKLYKEMVYEMKGYLTKDGIPELDRVEMI 416
Query: 394 IQSVAVYEDQIFQKRTRIQQAYEYNEAMK 422
++ + ED+IF++R + ++ ++ ++ K
Sbjct: 417 MKGLGKVEDEIFKRRQQDEERFKESQKHK 445
Score = 178 bits (451), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 85/184 (46%), Positives = 119/184 (64%), Gaps = 3/184 (1%)
Query: 444 VKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPY 503
++L E G+K+RYY KF++ + + + + V YVEGLCWV RYYYQ SW W++PY
Sbjct: 555 IRLFESGWKDRYYRAKFDVGSDDV--EFRHRVAWAYVEGLCWVLRYYYQGCSSWDWYFPY 612
Query: 504 HYAPFASDLKDLSDLEITFFL-GEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIY 562
HYAPFASD + + D + F +PF P +QLM PAAS LP +++ LMT+ SPI
Sbjct: 613 HYAPFASDFETVGDFKPDFSRPTKPFNPLEQLMSVFPAASKQHLPVEWQKLMTEDESPII 672
Query: 563 KFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYV 622
YP DF+ID+NGK++AWQGV LPF+DE+ LL K + LT+EE RN+ + +++
Sbjct: 673 DLYPADFRIDLNGKKYAWQGVALLPFVDEQRLLETLKTVYPTLTDEEKMRNTRGPNRIFI 732
Query: 623 HPQH 626
H
Sbjct: 733 GRNH 736
>gi|326479818|gb|EGE03828.1| hypothetical protein TEQG_02862 [Trichophyton equinum CBS 127.97]
Length = 1035
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 214/413 (51%), Positives = 286/413 (69%), Gaps = 12/413 (2%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQ-VDGEGVARPVDVSKPNPNGMEFDNLYLDMNGI 59
MGVPA +RWL+ +YP + VVEE PQ +DG+ + PVD++KPNPNG E DNLYLDMNGI
Sbjct: 1 MGVPALFRWLSSKYPKIVSAVVEEQPQEIDGQEI--PVDITKPNPNGEEMDNLYLDMNGI 58
Query: 60 IHPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRR 119
+HPC HP+GKP P + ++ IF Y D + +VRPRK+L +A+DGVAPRAKMNQQR+RR
Sbjct: 59 VHPCTHPEGKPPPANEGEMMLEIFKYTDRVVNMVRPRKVLMIAVDGVAPRAKMNQQRSRR 118
Query: 120 FRAAKDAA---EAEAEEERLRKEFEEAGKLLSAKEK--PETCDSNVITPGTQFMAVLSAA 174
FR+A+DA E + E +L K+ + K ++ E+ +T D+NVITPGT FM +L+ A
Sbjct: 119 FRSAQDAKAEDEKKVEFAKLLKKQKRGKKDVTVAEEVITKTWDTNVITPGTPFMDILALA 178
Query: 175 LQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLD 234
L+Y++ +L+ PGW+ KVI+SDA VPGEGEHKIM +IR QR P +DPNTRH +YGLD
Sbjct: 179 LRYWVAYKLSTDPGWEKLKVIISDATVPGEGEHKIMEFIRSQRACPEYDPNTRHVIYGLD 238
Query: 235 ADLIMLSLATHEIHFSILRE-VITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWN-GV 292
ADLIML L THE HF +LRE V + C +CGQ GH+ C GK + +++
Sbjct: 239 ADLIMLGLGTHEPHFRVLREDVFFQESKARTCKLCGQAGHVEEACTGKAKEKRGEFDEKQ 298
Query: 293 DDTPIHKKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMP 352
P+ K + +L++ VLREYL E+ +P PFP + ER +DD+VF+CFFVGNDFLPH+P
Sbjct: 299 KGNPL--KPFIWLHVSVLREYLAVEMQVPQQPFPFDLERALDDWVFMCFFVGNDFLPHLP 356
Query: 353 TLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIF 405
+LEIRE I+ L+ ++R MGGYLT G V L + + +Q +A ED IF
Sbjct: 357 SLEIRENGIDTLIAIWRDNIPQMGGYLTKDGRVDLAKAQLILQGLAKQEDAIF 409
Score = 213 bits (542), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 102/192 (53%), Positives = 135/192 (70%), Gaps = 2/192 (1%)
Query: 442 DTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFY 501
DTV+L E GY +RYY KF +S P++I + V YVEGL WV YY+Q SW W+Y
Sbjct: 574 DTVRLWEDGYADRYYEQKFGVS-PKDI-AFRHKVARAYVEGLSWVLLYYFQGCPSWTWYY 631
Query: 502 PYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPI 561
PYHYAPFA+D D+ ++++ F G PF+PF+QLMG LPAAS+ A+PE +R+LM+D +S I
Sbjct: 632 PYHYAPFAADFVDIGEMDVQFTKGTPFKPFEQLMGVLPAASNHAIPEVFRDLMSDENSEI 691
Query: 562 YKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLY 621
FYP DF +D+NGK+FAWQGV LPFIDEK LL K L+EEE RN++ D+L
Sbjct: 692 IDFYPEDFPVDLNGKKFAWQGVALLPFIDEKRLLAAMDKRYHLLSEEEQARNAMGKDVLL 751
Query: 622 VHPQHPLYQQIT 633
+ +HPLY+ +T
Sbjct: 752 LSEKHPLYESLT 763
>gi|350402247|ref|XP_003486419.1| PREDICTED: 5'-3' exoribonuclease 1-like [Bombus impatiens]
Length = 1628
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 246/654 (37%), Positives = 356/654 (54%), Gaps = 101/654 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MG+P F+R++++RYP + +D Q+ EFDNLYLD+NGII
Sbjct: 1 MGIPKFFRYISERYPCLTEKL--KDYQIP------------------EFDNLYLDVNGII 40
Query: 61 HPCFHPDGKPAP--TSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C HPD S + +FK+IF YI+ +F +++P+KL ++A+DGVAPRAK+NQQR+R
Sbjct: 41 HDCSHPDDTDITFRISEETIFKNIFRYIEVLFRMIQPQKLFFIAVDGVAPRAKINQQRSR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RF+ AKDA +++++ + + KEK DSN ITPGT FM+ L L+YF
Sbjct: 101 RFKTAKDA--------KIQEDKAKVKGTILPKEK--RFDSNCITPGTVFMSKLDEQLKYF 150
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
I +++ WQ KVI S + VPGEGEHKIM YIR + +D NT+HCLYGLDADLI
Sbjct: 151 ITYKISTDKLWQKCKVIFSGSQVPGEGEHKIMDYIRYMKTQANYDVNTKHCLYGLDADLI 210
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
ML L THEIHF++LRE +T +Q+K VC L E
Sbjct: 211 MLGLCTHEIHFTLLREELTFGKKQKK--VC-----LTPE--------------------- 242
Query: 299 KKKYQFLNIWVLREYLQYELDI--PNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEI 356
+ K+ ++ +LREY+ +E PFP N E I+DD++ + F +GNDF+PH+P L I
Sbjct: 243 ETKFCLFHLSLLREYINHEFSSLKEKLPFPYNLENIIDDWILMGFLIGNDFIPHLPNLHI 302
Query: 357 REGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQ------KRTR 410
GA+++L VY+ + GY+ + G + LDR EKF++ ++ ++ F K
Sbjct: 303 VHGALSVLYQVYKDVMPTLDGYINETGTLRLDRFEKFMERLSRFDTLQFSEYYADLKYLE 362
Query: 411 IQQAYEYNEAMKLNARRESSEELLQAPVAVAD--------------TVKLGEPGY----- 451
+ E N +R S E ++P + D T K + +
Sbjct: 363 SKTGRPLTETENSNDKRSGSSEETRSPRKMQDKEFDALLRSAADMSTGKYDDDEFGDDKS 422
Query: 452 ------------KERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQW 499
K+ YY +K + N +E + YV + W YYY CSW W
Sbjct: 423 DCEMYTMEFVQCKKDYYINKLKYENIDE--NFLRSQAEGYVRAIQWNLNYYYNGCCSWSW 480
Query: 500 FYPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSS 559
+YP+HYAP+ SD+KD DL++ F LGEPF PF+QL+ LP+ S LP ++ L+T+ S
Sbjct: 481 YYPHHYAPYISDIKDFKDLKLEFDLGEPFLPFEQLLAVLPSYSKDLLPPAFQTLLTEDQS 540
Query: 560 PIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRN 613
PI K+YP +F+ D+NGK W+ VV +PFI+EK ++ +T EE RN
Sbjct: 541 PIIKYYPTNFETDLNGKEQEWEAVVLIPFINEKDIVDAMAPRYPQITPEERARN 594
>gi|295660622|ref|XP_002790867.1| 5'-3' exoribonuclease [Paracoccidioides sp. 'lutzii' Pb01]
gi|226281119|gb|EEH36685.1| 5'-3' exoribonuclease [Paracoccidioides sp. 'lutzii' Pb01]
Length = 1053
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 221/448 (49%), Positives = 292/448 (65%), Gaps = 35/448 (7%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQ-VDGEGVARPVDVSKPNPNGMEFDNLYLDMNGI 59
MGVPA +RWL+ +YP I VVEE PQ +DG+ V PVD +KPNPNG E DNLYLDMNGI
Sbjct: 1 MGVPALFRWLSSKYPKIISSVVEELPQEIDGQEV--PVDTTKPNPNGEEMDNLYLDMNGI 58
Query: 60 IHPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAID--------------- 104
+HPC HP+GKP P++ +++ IF Y D + +VRPRKLL +A+D
Sbjct: 59 VHPCTHPEGKPPPSNEEEMMLEIFKYTDRVVNMVRPRKLLMIAVDVSLRTITLLSHYDDS 118
Query: 105 ------GVAPRAKMNQQRTRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPE---- 154
GVAPRAKMNQQR+RRFR+A++A EA+ ++ K + S +E E
Sbjct: 119 VISEGNGVAPRAKMNQQRSRRFRSAQEAKEADEKKVEFAKLLRKQNGKKSCEEIVEEVIV 178
Query: 155 -TCDSNVITPGTQFMAVLSAALQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYI 213
T DSNVITPGT FM +L+AAL+Y++ +LN P W+ K+I+SDA VPGEGEHKIM +I
Sbjct: 179 KTWDSNVITPGTPFMDILAAALRYWVAYKLNTDPAWEKLKIIISDATVPGEGEHKIMEFI 238
Query: 214 RLQRNLPGFDPNTRHCLYGLDADLIMLSLATHEIHFSILRE-VITLPGQQEKCFVCGQVG 272
R QR+ P +PNTRH +YGLDADLIML LATHE HF +LRE V + C +CGQ G
Sbjct: 239 RSQRSCPEHNPNTRHVIYGLDADLIMLGLATHEPHFRVLREDVFFQESKGRTCHLCGQTG 298
Query: 273 HLAAECHG--KPGDNPADWNGVDDTPIHKKKYQFLNIWVLREYLQYELDIPNPPFPINFE 330
H+A C G K + D G + K + +L++ VLREYL E+ +P PFP + E
Sbjct: 299 HIAEACKGTAKEKNGEFDEKGKGSS---LKPFIWLHVSVLREYLAVEMHVPQQPFPFDLE 355
Query: 331 RIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRV 390
R +DD+VF+CFFVGNDFLPH+P+L+IRE I+ L+ ++R MGGYLT G V L+R
Sbjct: 356 RALDDWVFMCFFVGNDFLPHLPSLDIRENGIDTLIAIWRDNIPVMGGYLTKDGHVDLNRA 415
Query: 391 EKFIQSVAVYEDQIFQKRTRIQQAYEYN 418
+ +Q +A ED IF++R + ++ N
Sbjct: 416 QLILQGLAKQEDAIFRRRRQTEERKNAN 443
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 112/229 (48%), Positives = 149/229 (65%), Gaps = 9/229 (3%)
Query: 442 DTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFY 501
DTV+L E GY +RYY KF++ +P++I+ + V YVEGL WV YY+Q SW W+Y
Sbjct: 590 DTVRLWEEGYADRYYEQKFQV-HPKDIE-FRHKVARAYVEGLAWVLLYYFQGCPSWTWYY 647
Query: 502 PYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPI 561
PYHYAPFA+D DL + I F G PF+PF+QLMG LPAAS+ A+PE + +LM+DP+S I
Sbjct: 648 PYHYAPFAADFVDLGKMNIEFNRGAPFKPFEQLMGVLPAASNHAIPEVFHDLMSDPNSEI 707
Query: 562 YKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLY 621
FYP +F ID+NGK+FAWQGV LPFIDEK LL +K L+ EE RNS+ D+L
Sbjct: 708 IDFYPEEFPIDLNGKKFAWQGVALLPFIDEKRLLVAMEKRYHLLSSEEHARNSMGRDVLL 767
Query: 622 VHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVNASGGMNGYIWLCERN 670
V +HPLY +T Q P+ ++++ S G+ G + ERN
Sbjct: 768 VSDRHPLYDNLTANFYSKKQGLPK----LKLNMRVSEGLGGKV---ERN 809
>gi|212531981|ref|XP_002146147.1| 5'->3' exoribonculease Dhp1 [Talaromyces marneffei ATCC 18224]
gi|210071511|gb|EEA25600.1| 5'->3' exoribonculease Dhp1 [Talaromyces marneffei ATCC 18224]
Length = 1042
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 226/476 (47%), Positives = 307/476 (64%), Gaps = 20/476 (4%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDP-QVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGI 59
MGVPA +RWL+++YP I V+EE P +V+GE + PVD +KPNPNG E DNLYLDMNGI
Sbjct: 1 MGVPALFRWLSNKYPKIISPVIEEQPYEVNGEVI--PVDTTKPNPNGEETDNLYLDMNGI 58
Query: 60 IHPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRR 119
+HPC HP+GKP P + ++ IF Y D + +VRPRKLL +A+DGVAPRAKMNQQR+RR
Sbjct: 59 VHPCTHPEGKPPPANEQEMMLEIFRYTDRVVNMVRPRKLLMIAVDGVAPRAKMNQQRSRR 118
Query: 120 FRAAKDAAEAEAEEERLRKEF--EEAGKLLSA----KEK--PETCDSNVITPGTQFMAVL 171
FR+A++A E + ++E +K + A K + KE+ +T DSNVITPGT FM +L
Sbjct: 119 FRSAQEARENDQKKEEFQKLLVKQNAAKGIDPDKDIKEQVIQKTWDSNVITPGTPFMDIL 178
Query: 172 SAALQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLY 231
SA+L+Y+I +LN P W+ K+I+SDA VPGEGEHK+M++IR QR P DPNTRH LY
Sbjct: 179 SASLRYWISYKLNTDPAWEKMKIIISDATVPGEGEHKVMNFIRSQRQDPSHDPNTRHVLY 238
Query: 232 GLDADLIMLSLATHEIHFSILRE-VITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWN 290
GLDADLIML LATHE HF +LRE V + C +CGQ GH A EC G+ + +++
Sbjct: 239 GLDADLIMLGLATHEPHFRVLREDVFFQESRPRTCRLCGQPGHKAEECRGEAKEKNGEFD 298
Query: 291 GVDD-TPIHKKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLP 349
P+ K + +LN+ VLREYL EL +P FP + ER +DD+VF+CFFVGNDFLP
Sbjct: 299 EKQKAAPL--KPFIWLNVSVLREYLAVELQVPQQRFPFDLERALDDWVFMCFFVGNDFLP 356
Query: 350 HMPTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRT 409
H+P+L+I+E AI+LL+ ++R M Y+T G V + + + + ED IF++R
Sbjct: 357 HLPSLDIKENAIDLLISIWRENIPLMDDYVTKDGIVNFNHAQLILNGLGKQEDGIFRRRR 416
Query: 410 RIQQAYEYNEAMKLNARRESSEELLQ-----APVAVADTVKLGEPGYKERYYADKF 460
+ ++ NE + + + E Q +P A L P K R + F
Sbjct: 417 QAEERKAANEQRRKEEEKARNAERSQKRRRSSPDYTAGEAGLSAPPAKGRKSGEGF 472
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 113/252 (44%), Positives = 158/252 (62%), Gaps = 7/252 (2%)
Query: 442 DTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFY 501
DTV+L E GY ERYY KF + +P ++ + V Y EGL WV YY Q SW W+Y
Sbjct: 593 DTVRLWESGYTERYYEQKFHV-DPSNVE-FRYQVARSYAEGLQWVLLYYMQGCPSWTWYY 650
Query: 502 PYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPI 561
PYHYAPFA+D D+ ++ +F G+PFRPF+QLMG LPA+S+ A+PE + +LM+DP+S I
Sbjct: 651 PYHYAPFAADFVDIGSMKPSFEKGKPFRPFEQLMGVLPASSNHAIPEIFHDLMSDPNSEI 710
Query: 562 YKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLY 621
FYP DF +D+NGK+FAWQGVV LPFIDE LL +K L+ +E RN+V D+L
Sbjct: 711 IDFYPEDFPVDLNGKKFAWQGVVLLPFIDETRLLAAMEKKYPLLSADEHARNTVGTDVLL 770
Query: 622 VHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVNASGGMNGYIWLCERNGLRSIIPSPVK 681
+ QHPLYQ+ L Y + +FA +D+ S G+ G + + + S + P
Sbjct: 771 ISDQHPLYQE--LAANFYSKKQSTSKFA--LDMRVSEGLAGKVERDDNHIPHSSLDPPYD 826
Query: 682 -GLPDIERNQAM 692
+P ++ N++M
Sbjct: 827 VDMPSLDENRSM 838
>gi|46138403|ref|XP_390892.1| hypothetical protein FG10716.1 [Gibberella zeae PH-1]
gi|115311956|sp|Q4HWE2.3|XRN2_GIBZE RecName: Full=5'-3' exoribonuclease 2
Length = 980
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 209/424 (49%), Positives = 283/424 (66%), Gaps = 7/424 (1%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MG+PA +RWL+ RYP I V+E+ P V +G PVD ++PNPNG EFDNLYLDMNGI+
Sbjct: 1 MGIPAAFRWLSTRYPKIISPVIEDQPLVMEDGSTIPVDTTRPNPNGEEFDNLYLDMNGIV 60
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ +PAP +++ +F Y D + +VRPRK+L +A+DGVAPRAKMNQQR+RRF
Sbjct: 61 HPCSHPEDRPAPKDEEEMMMEVFRYTDRVVNMVRPRKILMIAVDGVAPRAKMNQQRSRRF 120
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETC-----DSNVITPGTQFMAVLSAAL 175
R+A++A E E +++ L K ++ + E ET DSN ITPGT FM +L+ +L
Sbjct: 121 RSAQEAQEKEQDKQELIKMLKQQNGGNLSTESLETVTKKAFDSNSITPGTPFMDILALSL 180
Query: 176 QYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDA 235
+Y+ Q +LN PGW K+I+SDA VPGEGEHKIM+++R QR P DPNTRH +YGLDA
Sbjct: 181 RYWCQYKLNTDPGWAKLKIIISDATVPGEGEHKIMNFVRSQRASPDHDPNTRHVIYGLDA 240
Query: 236 DLIMLSLATHEIHFSILREVITLPGQQEK-CFVCGQVGHLAAECHGKPGDNPADWNGVDD 294
DLIML LATHE HF +LRE + Q+ + C +CGQ GH A C G+ + + D
Sbjct: 241 DLIMLGLATHEPHFRVLREDVFFQDQKARLCKICGQKGHDAQNCRGEEKKKDGEHD-EKD 299
Query: 295 TPIHKKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTL 354
+ K + +L++ VLREYL EL +PN PF + ER VDD++F+C FVGNDFLPH+P L
Sbjct: 300 KGVALKPFIWLHVAVLREYLAVELGVPNLPFRFDLERAVDDWIFMCCFVGNDFLPHLPAL 359
Query: 355 EIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQA 414
EIRE I+ L +++ MGGY+T G + L+R + + +A ED IF++R +
Sbjct: 360 EIREHGIDTLTKIWKDNLPVMGGYVTKDGHIDLERAQVILDGLAQQEDNIFKRRKEQEDR 419
Query: 415 YEYN 418
E N
Sbjct: 420 REAN 423
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 107/277 (38%), Positives = 161/277 (58%), Gaps = 15/277 (5%)
Query: 419 EAMKLNARRESSEELLQAPVAVADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLK 478
+A ++ S+EE PV D V+L E GY +RYY KF +P++I+ + V
Sbjct: 543 DAASVSTPSTSAEE---GPV---DDVRLWEDGYADRYYEKKFH-KDPKDIE-FRHGVGRA 594
Query: 479 YVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTL 538
YVEGL WV YY+Q SW+W+YPYHYAPFA+D KD++ + I+F G +PF+QLM L
Sbjct: 595 YVEGLAWVLLYYFQGCPSWEWYYPYHYAPFAADFKDIAKMNISFEKGRVSKPFEQLMSVL 654
Query: 539 PAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQT 598
PAAS ALPE + +LM +P S I FYP DF+ID+NGK+FAWQGV LPFI+ LL
Sbjct: 655 PAASRHALPEVFHDLMLNPESNIIDFYPEDFEIDLNGKKFAWQGVALLPFIEMPRLLAAV 714
Query: 599 KKLEVFLTEEELFRNSVMLDLLYVHPQH-PLYQQITLYCQLYHQLPPQDRFAWEIDVNAS 657
+ L+ + RN + D+L H LY ++ + Y + +F +++ S
Sbjct: 715 QSKYPELSAADSARNEMGRDVLIFSEGHESLYDEV--LTKFYSKKQGDSKF--KLNPKKS 770
Query: 658 GGMNGYIWLCERNGLRSIIPSPVK--GLPDIERNQAM 692
G++G + E S + P++ +PD++ ++++
Sbjct: 771 DGLSGRVEKKEGYVPHSELKYPLERNSMPDLDYDRSV 807
>gi|194892948|ref|XP_001977773.1| GG18055 [Drosophila erecta]
gi|190649422|gb|EDV46700.1| GG18055 [Drosophila erecta]
Length = 1583
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 253/669 (37%), Positives = 371/669 (55%), Gaps = 97/669 (14%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP F+R++++RYP + ++ E S P EFDNLYLDMNGI+
Sbjct: 1 MGVPKFFRYISERYP-CLSELAREH--------------SIP-----EFDNLYLDMNGIV 40
Query: 61 HPCFHPDGKPAPTSYDD--VFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C HPD ++ +F+ IF+Y+D +F L++P++L +LA+DGVAPRAKMNQQR+R
Sbjct: 41 HNCSHPDDNNIHFHLEEHQIFQDIFNYVDKLFYLIKPQRLFFLAVDGVAPRAKMNQQRSR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RFR+A++A + EA+ + R E E E DSN ITPGT+FM L L+ F
Sbjct: 101 RFRSAREAEQLEAKAAQ-RGERREH----------ERFDSNCITPGTEFMVRLQEGLRAF 149
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
++ +++ P WQ VILS PGEGEHKIM YIR + P FDPNTRHCLYGLDADLI
Sbjct: 150 LKTKISTDPLWQQCSVILSGQETPGEGEHKIMDYIRYMKAQPDFDPNTRHCLYGLDADLI 209
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
+L L THE+HF +LRE + K G N V T +
Sbjct: 210 ILGLCTHELHFVVLREEV------------------------KFGRN------VKRTSVE 239
Query: 299 KKKYQFLNIWVLREYLQYELDIPNPP-FPINFERIVDDFVFLCFFVGNDFLPHMPTLEIR 357
+ ++ L++ +LREYL+ E D N ++ +++DD+V + F VGNDF+PH+P + I
Sbjct: 240 ETRFFLLHLGLLREYLELEFDALNTAERKLDVSQLIDDWVLMGFMVGNDFIPHLPCMHIS 299
Query: 358 EGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRT-RIQQAYE 416
A+ LL Y + +GG + + G++ L R++ F+ ++A E ++F++ ++
Sbjct: 300 SNALPLLYRTYISIYPTLGGNINENGKLNLRRLQIFLSALAEVELELFKEHADDLKYMNA 359
Query: 417 YNEAMKLNARRESSEELLQAPVA--VADTVKLGEPG------------------YKERYY 456
EA ++ + + + + + +++++KL E G YK YY
Sbjct: 360 KTEAFDVDVAEITESQDIDSDLGALISESMKLYEDGSEEDWSDEEAVLMNELKNYKRNYY 419
Query: 457 ADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLS 516
+KF N + + +++ YV L WV YYY+ V SW W+YP+HYAPF SDL+++
Sbjct: 420 RNKF---NRDPQSDLLEELGHHYVNALQWVLDYYYRGVQSWDWYYPFHYAPFISDLRNIE 476
Query: 517 DLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGK 576
++I F +G PF PF QL+ LP AS LP Y +LM PSSP+ +FYP +F+ D+NGK
Sbjct: 477 QVQIDFQMGTPFLPFQQLLAVLPTASCKLLPAAYHDLMVLPSSPLAEFYPLEFESDLNGK 536
Query: 577 RFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVH--------PQHPL 628
+ W+ VV +PFIDE LL E L+ E RN LY + P HP
Sbjct: 537 KHDWEAVVLIPFIDEGRLLAAMLPCEEQLSLAERERNRHGPMYLYNYSAEAQGPMPSHPP 596
Query: 629 YQQI-TLYC 636
+ + LYC
Sbjct: 597 LKALPELYC 605
>gi|74210743|dbj|BAE25024.1| unnamed protein product [Mus musculus]
Length = 778
Score = 430 bits (1106), Expect = e-117, Method: Compositional matrix adjust.
Identities = 256/707 (36%), Positives = 372/707 (52%), Gaps = 113/707 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP FYRW+++RYP + +VV+E Q+ EFDNLYLDMNGII
Sbjct: 1 MGVPKFYRWISERYP-CLSEVVKEH-QIP------------------EFDNLYLDMNGII 40
Query: 61 HPCFHP--DGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C HP D S D +F IF Y++ +F +++PRK+ ++A+DGVAPRAKMNQQR R
Sbjct: 41 HQCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RFR+AK+A E++++K E+ G+ L + + DSN ITPGT+FMA L L+YF
Sbjct: 101 RFRSAKEA------EDKIKKAIEK-GETLPTEAR---FDSNCITPGTEFMARLHEHLKYF 150
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
+ +++ WQ + S + PGEGEHKIM +IR ++ PG DPNTRHCLYGLDADLI
Sbjct: 151 VNMKISTDKSWQGVTIYFSGHDTPGEGEHKIMEFIRSEKAKPGHDPNTRHCLYGLDADLI 210
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
ML L +HE HFS+LRE + G++ + VC ++T H
Sbjct: 211 MLGLTSHEAHFSLLREEVRFGGKKTQ-RVCAP----------------------EETTFH 247
Query: 299 KKKYQFLNIWVLREYLQYELDI--PNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEI 356
L++ ++REY+ YE F + E+I+DD++ + F VGNDF+PH+P L I
Sbjct: 248 -----LLHLSLMREYIDYEFSALKEKITFKYDIEKIIDDWILMGFLVGNDFIPHLPHLHI 302
Query: 357 REGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQK--------R 408
A+ LL Y +GGY+ ++G + L R E+++ ++ ++ + F +
Sbjct: 303 NHDALPLLYGTYIAILPELGGYINESGHLNLPRFERYLVKLSDFDREHFSEVFVDLKWFE 362
Query: 409 TRIQQAY-------------EYNEAMKLNARRES---------------SEELLQAPVAV 440
+++ Y E K + S S + +
Sbjct: 363 SKVGNKYLNEAAGAAAEEAKNCKEKRKPKGQENSLSWAALDKSEGEGVASRDNFEDETED 422
Query: 441 ADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWF 500
D + YK YY K + D+ + YV+ + W+ YYY V SW W+
Sbjct: 423 DDLFETEFRQYKRTYYMTKMGVDVVS--DEFLANQAACYVQAIQWILHYYYHGVQSWSWY 480
Query: 501 YPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSP 560
YPYHYAPF SD++ +S L+I F LG+PF+PF+QL+ LP+AS + LP Y++LMT SP
Sbjct: 481 YPYHYAPFLSDIRSISTLKIHFELGKPFKPFEQLLAVLPSASKNLLPTCYQHLMTSEDSP 540
Query: 561 IYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVM---- 616
I ++YPPDF+ D+NGK+ W+ VV +PFIDE LL + L +EE RN
Sbjct: 541 IIEYYPPDFKTDLNGKQQEWEAVVLIPFIDETRLLEAMETCNHSLKKEERKRNQHSECLM 600
Query: 617 ------LDLLYVHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVNAS 657
+ Y P + I C Y + AW +D+N +
Sbjct: 601 CWYDRDTEFTYSSPWPEKFPAIERCCTRYKMISLD---AWRVDINKN 644
>gi|301615368|ref|XP_002937144.1| PREDICTED: 5'-3' exoribonuclease 1 [Xenopus (Silurana) tropicalis]
Length = 1714
Score = 430 bits (1106), Expect = e-117, Method: Compositional matrix adjust.
Identities = 248/654 (37%), Positives = 353/654 (53%), Gaps = 100/654 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP FYRW+++RYP + +VV+E Q+ EFDNLYLDMNGII
Sbjct: 1 MGVPKFYRWISERYPC-LSEVVKEH-QIP------------------EFDNLYLDMNGII 40
Query: 61 HPCFHPDGKPAP--TSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C HP+ + D +F IF Y++ +F +++PRK+ ++A+DGVAPRAKMNQQR R
Sbjct: 41 HQCSHPNDDDVHFRITEDKIFADIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RFR+AK+A E++++K E+ G++L + + DSN ITPG +FMA L L+YF
Sbjct: 101 RFRSAKEA------EDKIKKAVEK-GEVLPTEAR---FDSNCITPGNEFMARLHEHLKYF 150
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
+ +++ WQ + LS PGEGEHKIM +IR Q+ P DPNTRHCLYGLDADLI
Sbjct: 151 VNMKISTDKSWQGVAIYLSGHETPGEGEHKIMEFIRSQKTKPDHDPNTRHCLYGLDADLI 210
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
ML L +HE+HFS+LRE + G++ + V T
Sbjct: 211 MLGLTSHEVHFSLLREEVRFGGKKNQKRV---------------------------TAPE 243
Query: 299 KKKYQFLNIWVLREYLQYEL-DIPNP-PFPINFERIVDDFVFLCFFVGNDFLPHMPTLEI 356
+ + L++ ++REY+ YE + N F + ERI+DD++ + F VGNDF+PH+P L I
Sbjct: 244 ETTFHLLHLSLMREYIDYEFSSLKNKISFEYDVERIIDDWILMGFLVGNDFIPHLPHLHI 303
Query: 357 REGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYE 416
A+ LL Y +GGY+ + G + L K+++ ++ ++ + F + + +E
Sbjct: 304 NHDALPLLYRTYISVLPTIGGYINENGYLNLYNFGKYLEKLSDFDREHFNEIFVDLKWFE 363
Query: 417 YNEAMK-LNARRESSEELLQAPVAVADTVKLGEPG------------------------- 450
K LN + E + + V++GE
Sbjct: 364 SKVGNKYLNEAAGQAAEEAKNIKKKKNKVRIGEKNAFCFSALENNGEENSEYEDPEDDEN 423
Query: 451 -----------YKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQW 499
YK YY K + D+ D YV+ + W+ YYY V SW W
Sbjct: 424 EDDLFETEFRQYKRTYYMSKMGVEVVS--DEFLADQAKCYVQAIQWILHYYYHGVQSWSW 481
Query: 500 FYPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSS 559
+YPYHYAP+ SD+ ++S L++TF LG+PF PF+QL+ LPAAS LP Y+NLM S
Sbjct: 482 YYPYHYAPYLSDICNISHLKLTFNLGKPFMPFEQLLAVLPAASKDLLPLTYQNLMISSDS 541
Query: 560 PIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRN 613
PI +YP DF+ D+NGK+ W+ VV +PFIDEK LL L EEE RN
Sbjct: 542 PIIDYYPQDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMVSCNRSLAEEEKKRN 595
>gi|322801233|gb|EFZ21920.1| hypothetical protein SINV_00544 [Solenopsis invicta]
Length = 809
Score = 430 bits (1105), Expect = e-117, Method: Compositional matrix adjust.
Identities = 226/425 (53%), Positives = 289/425 (68%), Gaps = 29/425 (6%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPAF+RWL+ +YP IV+ +E+ P + +G PV+ + PNPNG+EFDNLYLDMNGII
Sbjct: 1 MGVPAFFRWLSRKYPSVIVECIEQKP-ISADGTCIPVNSADPNPNGVEFDNLYLDMNGII 59
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ KPAP D++ ++IF+ ID +F +VRPRKLLY+AIDGVAPRAKMNQQR+RRF
Sbjct: 60 HPCTHPEDKPAPKDEDEMMEAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETC--DSNVITPGTQFMAVLSAALQYF 178
RA+K+ E E ER+R E G L EKP+ DSN ITPGT FMA LSA L Y+
Sbjct: 120 RASKETMEKIDEIERIRSELTLKGASLPP-EKPKEAHFDSNCITPGTPFMARLSACLHYY 178
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
I RLN PGW+ +VILSDANVPGEGEHKIM +IR QR P DPNT+H L G DADLI
Sbjct: 179 IHERLNNDPGWRNIQVILSDANVPGEGEHKIMDFIRRQRAQPDHDPNTQHVLCGADADLI 238
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHG-KPGDNPADWNGVDDTPI 297
ML LATHE +F+I+RE P + + C +CGQ+GH +C G +P P ++T
Sbjct: 239 MLGLATHEPNFTIIREEFK-PNKPKPCDICGQLGHEMRDCTGAEPNQRPE-----ENTFG 292
Query: 298 HKKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIR 357
+ + F+ + VLREYL+ EL +PN PF +FER VDD+VF+CFFVGNDFLPH+P+LEIR
Sbjct: 293 SECLFIFVRLNVLREYLERELYMPNLPFKYDFERAVDDWVFMCFFVGNDFLPHLPSLEIR 352
Query: 358 EGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYEY 417
EGAI+ L+ +Y++ G +L D ED+IF+KR + + A+
Sbjct: 353 EGAIDRLVALYKKAVYKTGVHLGDV------------------EDEIFKKRQQNELAFRQ 394
Query: 418 NEAMK 422
E K
Sbjct: 395 REKDK 399
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 117/245 (47%), Positives = 145/245 (59%), Gaps = 11/245 (4%)
Query: 442 DTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFY 501
D V+L E G+K+RYY KF++S P+ + +V L+YV GLCWV RYYYQ SW+W++
Sbjct: 497 DEVRLWEDGFKDRYYESKFDVS-PDNF-AFRNNVALQYVRGLCWVLRYYYQGCASWRWYF 554
Query: 502 PYHYAPFASDLKDLSDLEITFFLGE-PFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSP 560
PYHYAPFASD ++ L F PFRP +QLMG PAAS +PE + LMTDP S
Sbjct: 555 PYHYAPFASDFINIGGLSTEFEKNTVPFRPLEQLMGVFPAASRKHVPEPWAKLMTDPKSQ 614
Query: 561 IYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLL 620
I FYP DF+ID+NGK+FAWQGV LPF+DEK L + LTE E RN D L
Sbjct: 615 IIDFYPEDFKIDLNGKKFAWQGVALLPFVDEKRLFKALAPYYDSLTEAEKKRNVRGDDRL 674
Query: 621 YVHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVNASGGMNGYIWLCERN-GLRSIIPSP 679
YV + Y I LY D+ EI VN GM G + L + N +PSP
Sbjct: 675 YVGIGNKGYDFIK---GLYTNCIGFDKEV-EISVN---GMRGTVLLSDDNVSDGGTLPSP 727
Query: 680 VKGLP 684
V+GLP
Sbjct: 728 VRGLP 732
>gi|315040952|ref|XP_003169853.1| 5'-3' exoribonuclease 2 [Arthroderma gypseum CBS 118893]
gi|311345815|gb|EFR05018.1| 5'-3' exoribonuclease 2 [Arthroderma gypseum CBS 118893]
Length = 1038
Score = 430 bits (1105), Expect = e-117, Method: Compositional matrix adjust.
Identities = 213/416 (51%), Positives = 288/416 (69%), Gaps = 18/416 (4%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQ-VDGEGVARPVDVSKPNPNGMEFDNLYLDMNGI 59
MGVPA +RWL+ +YP + VVEE PQ +DG+ + PVD++KPNPNG E DNLYLDMNGI
Sbjct: 1 MGVPALFRWLSSKYPKIVSAVVEEQPQEIDGQEI--PVDITKPNPNGEEMDNLYLDMNGI 58
Query: 60 IHPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRR 119
+HPC HP+GKP P + ++ IF Y D + +VRPRKLL +A+DGVAPRAKMNQQR+RR
Sbjct: 59 VHPCTHPEGKPPPANEGEMMLEIFKYTDRVVNMVRPRKLLMIAVDGVAPRAKMNQQRSRR 118
Query: 120 FRAAKDAAEAEAEEER-------LRKEFEEAGKLLSAKEK-PETCDSNVITPGTQFMAVL 171
FR+A+DA +AE+E+ L+K+ + A+E +T D+NVITPGT FM +L
Sbjct: 119 FRSAQDA---KAEDEKKVEFAKLLKKQKRGKSDVTIAEEVIKKTWDTNVITPGTPFMDIL 175
Query: 172 SAALQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLY 231
+ AL+Y++ +L+ PGW+ K+I+SDA VPGEGEHKIM ++R QR P +DPNTRH +Y
Sbjct: 176 ALALRYWVAYKLSTDPGWEKLKIIISDATVPGEGEHKIMEFVRSQRACPEYDPNTRHVIY 235
Query: 232 GLDADLIMLSLATHEIHFSILRE-VITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWN 290
GLDADLIML L THE HF +LRE V + C +CGQ GH+ C GK + +++
Sbjct: 236 GLDADLIMLGLGTHEPHFRVLREDVFFQESKARTCKLCGQAGHVEEACTGKAKEKQGEFD 295
Query: 291 -GVDDTPIHKKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLP 349
+P+ K + +L++ +LREYL E+ +P PFP + ER +DD+VF+CFFVGNDFLP
Sbjct: 296 EKQKGSPL--KPFIWLHVSILREYLAVEMQVPQQPFPFDLERALDDWVFMCFFVGNDFLP 353
Query: 350 HMPTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIF 405
H+P+LEIRE I+ L+ ++R MGGYLT G V L + + +Q +A ED IF
Sbjct: 354 HLPSLEIRENGIDTLIAIWRDNIPQMGGYLTKDGRVDLAKAQLILQGLAKQEDAIF 409
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 106/223 (47%), Positives = 146/223 (65%), Gaps = 6/223 (2%)
Query: 442 DTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFY 501
DTV+L E GY +RYY KF +S P++I + V YVEGL WV YY+Q SW W+Y
Sbjct: 573 DTVRLWEDGYADRYYEQKFGVS-PKDI-AFRHKVARAYVEGLSWVLLYYFQGCPSWTWYY 630
Query: 502 PYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPI 561
PYHYAPFA+D D+ ++++ F G PF+PF+QLMG LPAAS+ A+PE +R+LM+D +S I
Sbjct: 631 PYHYAPFAADFVDIGEMDVQFNKGTPFKPFEQLMGVLPAASNHAIPEVFRDLMSDENSEI 690
Query: 562 YKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLY 621
FYP DF +D+NGK+FAWQGV LPFIDEK LL K L+E E RN++ D+L
Sbjct: 691 IDFYPEDFPVDLNGKKFAWQGVALLPFIDEKRLLAAMDKRYHLLSEAEQARNAMGKDVLL 750
Query: 622 VHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVNASGGMNGYI 664
+ +HPLY+ +T Y + Q ++++ S G+ G +
Sbjct: 751 LSEKHPLYESLT--ANFYSK--KQGSSKLKLNMRISEGLGGKV 789
>gi|346319605|gb|EGX89206.1| 5'-3' exoribonuclease Dhp1 [Cordyceps militaris CM01]
Length = 970
Score = 430 bits (1105), Expect = e-117, Method: Compositional matrix adjust.
Identities = 210/424 (49%), Positives = 286/424 (67%), Gaps = 7/424 (1%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MG+PA +RWL+++YP I V+E+ P V +G A PVD+++ NPNG E DNLYLDMNGI+
Sbjct: 1 MGIPAAFRWLSNKYPKIISPVIEDRPVVMEDGTAIPVDITRANPNGEELDNLYLDMNGIV 60
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HPD KPAP +++ IF Y D + +VRPRK+L +A+DGVAPRAKMNQQR+RRF
Sbjct: 61 HPCSHPDDKPAPEDEEEMMLEIFKYTDRVLNMVRPRKILMIAVDGVAPRAKMNQQRSRRF 120
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETC-----DSNVITPGTQFMAVLSAAL 175
R+A++A + E +++ L K ++ A E E D+N ITPGT FM +L+++L
Sbjct: 121 RSAQEAKDKENDKQELIKLLKQQNGGNLATESTEAIAKKAFDNNSITPGTPFMDILASSL 180
Query: 176 QYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDA 235
+Y+ Q +LN PGW KVI+SDA VPGEGEHKIM+++R QR P +DPNTRH +YGLDA
Sbjct: 181 RYWCQYKLNTDPGWAKLKVIISDATVPGEGEHKIMNFVRSQRASPDYDPNTRHVIYGLDA 240
Query: 236 DLIMLSLATHEIHFSILRE-VITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDD 294
DLIML LATHE HF +LRE V + C +CGQ GH A C G+ + + D
Sbjct: 241 DLIMLGLATHEPHFRVLREDVFFQDSKARTCKLCGQRGHDAQNCKGETKGKSGEVD-EKD 299
Query: 295 TPIHKKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTL 354
P+ K + +L++ VLREYL EL IP PF + ER++DD++F+C FVGNDFLPH+P L
Sbjct: 300 KPVILKPFIWLHVSVLREYLAAELAIPELPFRFDLERVIDDWIFMCCFVGNDFLPHLPAL 359
Query: 355 EIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQA 414
EIRE I+ L ++++ A+GGY+T G + L+R + + +A ED IF+KR +
Sbjct: 360 EIREHGIDTLTTIWKQNLPALGGYITKDGHIDLERAQCILDGLAGQEDMIFKKRKEQEDR 419
Query: 415 YEYN 418
E N
Sbjct: 420 REAN 423
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 128/353 (36%), Positives = 184/353 (52%), Gaps = 20/353 (5%)
Query: 351 MPTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTR 410
MPT +R I M V R + A VL +R+ + + +E + R
Sbjct: 465 MPTAPLR--GITHDMIVNRTSVSDATAANKSAASVLKERLIAG-RGTSGHETNLNDTEDR 521
Query: 411 IQQAYEYN------EAMKLNARRESSEELLQAPV--AVADTVKLGEPGYKERYYADKFEI 462
Q+ E+++ + ES A V A AD V+L E GY +RYY KF
Sbjct: 522 SSQSAPSKRKLSAVESVEDSTPNESQGTTNPANVSEAPADPVRLWEDGYADRYYQLKFH- 580
Query: 463 SNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDLEITF 522
+P +I +K V YVEGL WV +YY+Q SW+W+YPYHYAPFA+D KD+S + F
Sbjct: 581 RDPGDI-AFRKHVAHAYVEGLAWVLQYYFQGCPSWEWYYPYHYAPFAADFKDISGANVAF 639
Query: 523 FLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQG 582
G RPF+QLM LPAAS LPE + +LMTD S I FYP +F++D+NGK+ AWQG
Sbjct: 640 EKGIISRPFEQLMSVLPAASRDNLPEIFHSLMTDRDSDIIDFYPEEFEVDLNGKKMAWQG 699
Query: 583 VVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVHPQH-PLYQQITLYCQLYHQ 641
V LPFI+ LL ++ L++E+ RN V D+L + H +Y +I Y +
Sbjct: 700 VALLPFIEMDRLLEAVQRRYPLLSDEDSKRNGVGRDVLLLSDSHESIYDEI--LTNFYSK 757
Query: 642 LPPQDRFAWEIDVNASGGMNGYIWLCERNGLRSIIPSPV--KGLPDIERNQAM 692
Q ++++ S G++GY+ E + P+ K +PDIE ++ M
Sbjct: 758 R--QGSAQFKLNPKTSDGLSGYVEKQEGYVPHGTLHYPLERKSMPDIEYDRTM 808
>gi|312384683|gb|EFR29353.1| hypothetical protein AND_01770 [Anopheles darlingi]
Length = 867
Score = 430 bits (1105), Expect = e-117, Method: Compositional matrix adjust.
Identities = 216/392 (55%), Positives = 276/392 (70%), Gaps = 5/392 (1%)
Query: 39 VSKPNPNGMEFDNLYLDMNGIIHPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKL 98
+S PNPN +EFDNLYLDMNGIIHPC HP+ KPAP + D++ +IF+ ID + +VRPRK+
Sbjct: 1 MSNPNPNRIEFDNLYLDMNGIIHPCTHPEDKPAPKNEDEMMVAIFECIDRLMNIVRPRKV 60
Query: 99 LYLAIDGVAPRAKMNQQRTRRFRAAKDAAEAEAEEERLRKEFEEAGKLL-SAKEKPETCD 157
LY+AIDGVAPRAKMNQQR+RRFRA+K+AAE E R+R+E G +L KEK D
Sbjct: 61 LYMAIDGVAPRAKMNQQRSRRFRASKEAAEKATEVARIREELAAKGAILPPEKEKGSHFD 120
Query: 158 SNVITPGTQFMAVLSAALQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQR 217
SN ITPGT FM LS LQY+I R+N PGW+ KVILSDANVPGEGEHKIM YIR QR
Sbjct: 121 SNCITPGTPFMDRLSKCLQYYIHDRMNNYPGWKDLKVILSDANVPGEGEHKIMDYIRKQR 180
Query: 218 NLPGFDPNTRHCLYGLDADLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAE 277
P +DPNT H L G DADLIML LATHE HF+I+RE LP + C +C Q+GH +
Sbjct: 181 VQPDYDPNTHHVLCGADADLIMLGLATHETHFTIIREEF-LPNKDRPCDICQQIGHEMKD 239
Query: 278 CHGKPGDNPADWNGVDDTPIHKKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFV 337
C G + D P + ++ F+ + VL+EYLQ ELD+PN PF +FER++DD+V
Sbjct: 240 CSGLQSER--DMIKTPPGPGKETQFIFVRLNVLKEYLQKELDMPNLPFAYDFERVIDDWV 297
Query: 338 FLCFFVGNDFLPHMPTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSV 397
F+CFFVGNDFLPH+P+LEIRE AI+ L+ +Y++ GYLTD+G V+LDRVE + +
Sbjct: 298 FMCFFVGNDFLPHLPSLEIRENAIDRLITLYKKCVYKTRGYLTDSGSVVLDRVEMIMTDL 357
Query: 398 AVYEDQIFQKRTRIQQAY-EYNEAMKLNARRE 428
ED+IF++R + + E N+ M+L R+
Sbjct: 358 GFAEDEIFRQRKVSEDRFKERNKRMRLQKDRQ 389
Score = 205 bits (521), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 113/253 (44%), Positives = 149/253 (58%), Gaps = 11/253 (4%)
Query: 442 DTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFY 501
D V+L E G+K+RYY KF++S P+ I K ++ V +YV GLCWV RYYYQ SW+W++
Sbjct: 478 DEVRLWEDGFKDRYYESKFDVS-PQNI-KFRQTVAWEYVRGLCWVLRYYYQGCASWEWYF 535
Query: 502 PYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPI 561
PYHYAPFASD K L ++ F G PF+P QLMG PAAS S +P + LM DP SPI
Sbjct: 536 PYHYAPFASDFKHLENVNTHFDRGTPFKPLQQLMGVFPAASRSHVPPAFAELMVDPRSPI 595
Query: 562 YKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLY 621
FYP DF ID+NGK+FAWQGV LPF+DEK L R T LT+EE RN L+
Sbjct: 596 IDFYPIDFHIDLNGKKFAWQGVALLPFVDEKRLFRATDPKVPLLTQEERLRNENGDAKLF 655
Query: 622 VHPQHPLYQQIT-LYCQLYHQLPPQDRFAWEIDVNASGGMNGYIWLCERNGLR-SIIPSP 679
V P Y+ + LY + + + A +D + G I + N + +PSP
Sbjct: 656 VLPGSTGYRTLAGLYGG--NDVDYEREVAVTVDY-----VQGLIVPTKENVPQDGTLPSP 708
Query: 680 VKGLPDIERNQAM 692
+ GL + N+ +
Sbjct: 709 IPGLTAVTDNRVL 721
>gi|242774442|ref|XP_002478441.1| 5'->3' exoribonculease Dhp1 [Talaromyces stipitatus ATCC 10500]
gi|218722060|gb|EED21478.1| 5'->3' exoribonculease Dhp1 [Talaromyces stipitatus ATCC 10500]
Length = 1042
Score = 430 bits (1105), Expect = e-117, Method: Compositional matrix adjust.
Identities = 219/459 (47%), Positives = 297/459 (64%), Gaps = 13/459 (2%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDP-QVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGI 59
MGVPA +RWL+++YP I V+EE P +V+GE + PVD +KPNPNG E DNLYLDMNGI
Sbjct: 1 MGVPALFRWLSNKYPKIISPVIEEQPYEVNGEVI--PVDTTKPNPNGEETDNLYLDMNGI 58
Query: 60 IHPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRR 119
+HPC HP+GKP P + ++ IF Y D + +VRPRKLL +A+DGVAPRAKMNQQR+RR
Sbjct: 59 VHPCTHPEGKPPPANEQEMMLEIFRYTDRVVNMVRPRKLLMIAVDGVAPRAKMNQQRSRR 118
Query: 120 FRAAKDAAEAEAEEERLRKEF--EEAGKLLSAKEKPE------TCDSNVITPGTQFMAVL 171
FR+A++A E + ++E +K + A K + E T DSNVITPGT FM +L
Sbjct: 119 FRSAQEARENDQKKEEFQKLLARQNAAKGIDPDNNLEEQVIKKTWDSNVITPGTPFMDIL 178
Query: 172 SAALQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLY 231
SA+L+Y+I +LN P W+ K+I+SDA VPGEGEHK+M++IR QR P DPNTRH LY
Sbjct: 179 SASLRYWISYKLNTDPAWEKLKIIISDATVPGEGEHKVMNFIRSQRQDPSHDPNTRHVLY 238
Query: 232 GLDADLIMLSLATHEIHFSILRE-VITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWN 290
GLDADLIML LATHE HF +LRE V + C +CGQ GH A EC G+ + +++
Sbjct: 239 GLDADLIMLGLATHEPHFRVLREDVFFQESKPRTCRLCGQTGHKAEECRGQAKEKNGEFD 298
Query: 291 GVDDTPIHKKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPH 350
+ K + +LN+ VLREYL EL +P FP + ER +DD+VF+CFFVGNDFLPH
Sbjct: 299 EKQKAAV-LKPFIWLNVSVLREYLAIELQVPQQRFPFDLERALDDWVFMCFFVGNDFLPH 357
Query: 351 MPTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTR 410
+P+L+I+E AI+LL+ ++R M Y+T G V + + + E+ IF++R +
Sbjct: 358 LPSLDIKENAIDLLISIWRENIPLMDDYVTKDGIVNFKHAQLILTGLGKQEEAIFRRRRQ 417
Query: 411 IQQAYEYNEAMKLNARRESSEELLQAPVAVADTVKLGEP 449
++ NE + + + E Q + GEP
Sbjct: 418 AEERKAANEQRRKEEEKARNAERSQKRRRSSPDYTAGEP 456
Score = 219 bits (557), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 112/252 (44%), Positives = 161/252 (63%), Gaps = 7/252 (2%)
Query: 442 DTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFY 501
DTV+L EPGY ERYY KF + +P ++ + V Y EGL WV YY Q SW W+Y
Sbjct: 597 DTVRLWEPGYTERYYEQKFHV-DPSNVE-FRHQVARSYAEGLQWVLLYYMQGCPSWTWYY 654
Query: 502 PYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPI 561
PYHYAPFASD D+ D++ F G+PF+PF+QLMG LPA+S+ A+PE + +LM+DP+S I
Sbjct: 655 PYHYAPFASDFVDIGDMKPNFVKGKPFKPFEQLMGVLPASSNHAIPEIFHDLMSDPNSEI 714
Query: 562 YKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLY 621
FYP DF +D+NGK+FAWQGVV LPFIDE LL +K L+ +E RN+V D+L
Sbjct: 715 IDFYPEDFPVDLNGKKFAWQGVVLLPFIDEVRLLAAMEKKYPLLSADEHARNTVGSDVLL 774
Query: 622 VHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVNASGGMNGYIWLCERNGLRSIIPSPVK 681
+ QHPLYQ++ + Q+ P+ +++++ S G+ G + + + S + P
Sbjct: 775 LSDQHPLYQELAMNFYSKKQVVPK----FKLNMRVSEGLAGKVERDDNHIPHSSLNPPYD 830
Query: 682 -GLPDIERNQAM 692
+P ++ N++M
Sbjct: 831 VDMPSLDENRSM 842
>gi|170043138|ref|XP_001849256.1| 5'-3' exoribonuclease 1 [Culex quinquefasciatus]
gi|167866570|gb|EDS29953.1| 5'-3' exoribonuclease 1 [Culex quinquefasciatus]
Length = 1609
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 244/649 (37%), Positives = 354/649 (54%), Gaps = 96/649 (14%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP F+R++++RYP + ++V E+ D FDNLYLDMNGII
Sbjct: 1 MGVPKFFRYMSERYPC-LGELVRENQVPD-------------------FDNLYLDMNGII 40
Query: 61 HPCFHPDGKPA--PTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C HP+ + + +F IF Y++ +F ++RP+KL ++A+DGVAPRAKMNQQR R
Sbjct: 41 HNCSHPNDSDVFFRITEEQIFSDIFHYLEFLFRMIRPQKLFFIAVDGVAPRAKMNQQRGR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RFR+A++A E + E+ G +L + + DSN ITPGT FM L AL++F
Sbjct: 101 RFRSAREAQEQVEQAEK-------KGDVLPLEAR---FDSNCITPGTSFMVRLQRALEHF 150
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
I+ +++ P W+ KV+LS PGEGEHKIM YIR + PGFD NTRHCLYGLDADLI
Sbjct: 151 IKVKVSTNPLWKHCKVVLSGHETPGEGEHKIMEYIRHAKASPGFDSNTRHCLYGLDADLI 210
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
ML L THE HFS+LRE + +K + +
Sbjct: 211 MLGLCTHERHFSLLREEVKFGKNDKKSSI-----------------------------VE 241
Query: 299 KKKYQFLNIWVLREYLQYELDIPNPPFPINFE--RIVDDFVFLCFFVGNDFLPHMPTLEI 356
+ ++ L++ +LREYL+ E F +++DD+V + + VGNDF+PH+P L I
Sbjct: 242 ETRFYLLHLTLLREYLELEFAPVRDKLKFEFNPYKLIDDWVLMGYMVGNDFIPHLPNLHI 301
Query: 357 REGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIF-QKRTRIQQAY 415
E A+ L Y + GY+ + G + L+R+E ++ +A ++ IF + T +Q
Sbjct: 302 NENALPTLFQAYMDVLPGLDGYINEGGILNLERLEVLMERLARFDRDIFLENYTDLQYFK 361
Query: 416 EYNEAMKLNARRESSEEL-------LQAPVAVADTVKLG--EPGYKERYYADKFEISNPE 466
A A + EE+ L A + ++ + L E G ERY + E ++PE
Sbjct: 362 AKRGANDTEAFDVTLEEIKADMDMDLSALIKASEDMFLDDDEDGGGERYSTEDIE-NDPE 420
Query: 467 EIDK----------------------VKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYH 504
+K + + Y+ L W YYY+ V SW W+YP+H
Sbjct: 421 LFEKEFAAYKRNYYMTKMGYGDFNEETRAEQAECYIRALQWTLLYYYRGVSSWAWYYPHH 480
Query: 505 YAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKF 564
YAPF SD+++ ++++ F +G+PF PF QL+ LPAAS LP Y LMTDP S + +
Sbjct: 481 YAPFISDVQNFKNIKLNFEMGKPFLPFQQLLSVLPAASKDHLPTAYHKLMTDPDSSVIDY 540
Query: 565 YPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRN 613
YP +F D+NGK+ AW+ VV +PFIDEK LL+ + + FLT+EE RN
Sbjct: 541 YPENFGTDLNGKQQAWEAVVLIPFIDEKRLLKAMEPCDAFLTDEEKQRN 589
>gi|383853936|ref|XP_003702478.1| PREDICTED: 5'-3' exoribonuclease 1-like [Megachile rotundata]
Length = 1665
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 252/668 (37%), Positives = 355/668 (53%), Gaps = 102/668 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MG+P FYR++++RYP + + ++E EFDNLYLD+NGII
Sbjct: 1 MGIPKFYRYISERYPC-LNETLKEHQMP-------------------EFDNLYLDVNGII 40
Query: 61 HPCFHPDGKPAP--TSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C HP+ + +D+FK+IF YI+ +F +++P+KL ++AIDGVAPRAK+NQQR R
Sbjct: 41 HGCSHPNDAEVSFRITEEDIFKNIFRYIELLFRMIQPQKLFFIAIDGVAPRAKINQQRGR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RFRAAKD AE +E + R E E K + DSN ITPGT FM ++ L+YF
Sbjct: 101 RFRAAKD---AEIQEAKARAEGIEI-------PKEKRFDSNAITPGTAFMYKVNEHLRYF 150
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
+ +++ WQ KVI S + VPGEGEHKIM YIR + P +D +T+HCLYGLDADLI
Sbjct: 151 VTYKISSDKLWQKCKVIFSGSEVPGEGEHKIMDYIRYMKAQPDYDIHTKHCLYGLDADLI 210
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
ML L THE+HF++LRE +T +Q K TP
Sbjct: 211 MLGLCTHELHFTLLREEVTYDKKQTKIL----------------------------TP-E 241
Query: 299 KKKYQFLNIWVLREYLQYELDI--PNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEI 356
K K+ +I +LREY+ +E F + E+I+DD++ + F VGNDF+PH+P L I
Sbjct: 242 KTKFCLFHISLLREYINHEFSQLREKLSFSYDLEKIIDDWILMGFLVGNDFIPHLPNLHI 301
Query: 357 REGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQ------KRTR 410
GA+++L VY + GY+ +AG + LDR EKF++ ++ ++ F K
Sbjct: 302 THGALSILYEVYIDVLPTLEGYINEAGTLKLDRFEKFMERLSSFDILKFSEHYADLKYLE 361
Query: 411 IQQAYEYNEAMKLNARRESSEELLQAP-----------VAVADTVKLGEPG--------- 450
+ E K+N R+ S E +P + D + +G
Sbjct: 362 GKMGRPLTETEKVNHRKSESSEQNSSPKKAQDKRFNAFIKAVDEMSIGTEDELRDDESDS 421
Query: 451 ---------YKERYYADKFEISNPEEIDK-VKKDVVLKYVEGLCWVCRYYYQDVCSWQWF 500
+K YY +K + EEID+ + YV L W YYY CSW W+
Sbjct: 422 ETYTMEFVQHKRDYYINKLKY---EEIDEDFLRSQAEGYVTALQWNLHYYYNGCCSWTWY 478
Query: 501 YPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSP 560
YP+HYAP+ SD+KD +L++ F LGEPF PF+QL+ LP S LP ++ L+T+ SP
Sbjct: 479 YPHHYAPYISDIKDFKNLKLEFELGEPFLPFEQLLAVLPPYSKELLPSAFQPLLTEEQSP 538
Query: 561 IYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLL 620
I +YP DF+ D+NGK W+ V+ +PFID L+ LT EE RN
Sbjct: 539 IIDYYPMDFETDLNGKTLEWEAVILIPFIDATRLVDAMAPHYDKLTPEEKARNKHGPMYC 598
Query: 621 YVHPQHPL 628
Y H + L
Sbjct: 599 YTHTEENL 606
>gi|115495455|ref|NP_036046.2| 5'-3' exoribonuclease 1 [Mus musculus]
gi|162318350|gb|AAI56977.1| 5'-3' exoribonuclease 1 [synthetic construct]
gi|162319526|gb|AAI56134.1| 5'-3' exoribonuclease 1 [synthetic construct]
Length = 1723
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 254/705 (36%), Positives = 369/705 (52%), Gaps = 113/705 (16%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP FYRW+++RYP + +VV+E Q+ EFDNLYLDMNGII
Sbjct: 1 MGVPKFYRWISERYPC-LSEVVKEH-QIP------------------EFDNLYLDMNGII 40
Query: 61 HPCFHPDGKPAP--TSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C HP+ S D +F IF Y++ +F +++PRK+ ++A+DGVAPRAKMNQQR R
Sbjct: 41 HQCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RFR+AK+A E++++K E+ G+ L + + DSN ITPGT+FMA L L+YF
Sbjct: 101 RFRSAKEA------EDKIKKAIEK-GETLPTEAR---FDSNCITPGTEFMARLHEHLKYF 150
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
+ +++ WQ + S PGEGEHKIM +IR ++ P DPNTRHCLYGLDADLI
Sbjct: 151 VNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLI 210
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
ML L +HE HFS+LRE + G++ + VC ++T H
Sbjct: 211 MLGLTSHEAHFSLLREEVRFGGKKTQ-RVCAP----------------------EETTFH 247
Query: 299 KKKYQFLNIWVLREYLQYELDI--PNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEI 356
L++ ++REY+ YE F + E+I+DD++ + F VGNDF+PH+P L I
Sbjct: 248 -----LLHLSLMREYIDYEFSALKEKITFKYDIEKIIDDWILMGFLVGNDFIPHLPHLHI 302
Query: 357 REGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQK--------R 408
A+ LL Y +GGY+ ++G + L R E+++ ++ ++ + F +
Sbjct: 303 NHDALPLLYGTYIAILPELGGYINESGHLNLPRFERYLVKLSDFDREHFSEVFVDLKWFE 362
Query: 409 TRIQQAY-------------EYNEAMKLNARRES---------------SEELLQAPVAV 440
+++ Y E K + S S + +
Sbjct: 363 SKVGNKYLNEAAGAAAEEAKNCKEKRKPKGQENSLSWAALDKSEGEGVASRDNFEDETED 422
Query: 441 ADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWF 500
D + YK YY K + D+ + YV+ + W+ YYY V SW W+
Sbjct: 423 DDLFETEFRQYKRTYYMTKMGVDVVS--DEFLANQAACYVQAIQWILHYYYHGVQSWSWY 480
Query: 501 YPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSP 560
YPYHYAPF SD++ +S L+I F LG+PF+PF+QL+ LP+AS + LP Y++LMT SP
Sbjct: 481 YPYHYAPFLSDIRSISTLKIHFELGKPFKPFEQLLAVLPSASKNLLPTCYQHLMTSEDSP 540
Query: 561 IYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVM---- 616
I ++YPPDF+ D+NGK+ W+ VV +PFIDE LL + L +EE RN
Sbjct: 541 IIEYYPPDFKTDLNGKQQEWEAVVLIPFIDETRLLEAMETCNHSLKKEERKRNQHSECLM 600
Query: 617 ------LDLLYVHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVN 655
+ Y P + I C Y + AW +D+N
Sbjct: 601 CWYDRDTEFTYSSPWPEKFPAIERCCTRYKMISLD---AWRVDIN 642
>gi|81861755|sp|P97789.1|XRN1_MOUSE RecName: Full=5'-3' exoribonuclease 1; Short=mXRN1; AltName:
Full=Protein Dhm2; AltName: Full=Strand-exchange protein
1 homolog
gi|1894791|emb|CAA62819.1| 5'-3' exonuclease [Mus musculus]
Length = 1719
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 254/705 (36%), Positives = 369/705 (52%), Gaps = 113/705 (16%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP FYRW+++RYP + +VV+E Q+ EFDNLYLDMNGII
Sbjct: 1 MGVPKFYRWISERYPC-LSEVVKEH-QIP------------------EFDNLYLDMNGII 40
Query: 61 HPCFHPDGKPAP--TSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C HP+ S D +F IF Y++ +F +++PRK+ ++A+DGVAPRAKMNQQR R
Sbjct: 41 HQCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RFR+AK+A E++++K E+ G+ L + + DSN ITPGT+FMA L L+YF
Sbjct: 101 RFRSAKEA------EDKIKKAIEK-GETLPTEAR---FDSNCITPGTEFMARLHEHLKYF 150
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
+ +++ WQ + S PGEGEHKIM +IR ++ P DPNTRHCLYGLDADLI
Sbjct: 151 VNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLI 210
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
ML L +HE HFS+LRE + G++ + VC ++T H
Sbjct: 211 MLGLTSHEAHFSLLREEVRFGGKKTQ-RVCAP----------------------EETTFH 247
Query: 299 KKKYQFLNIWVLREYLQYELDI--PNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEI 356
L++ ++REY+ YE F + E+I+DD++ + F VGNDF+PH+P L I
Sbjct: 248 -----LLHLSLMREYIDYEFSALKEKITFKYDIEKIIDDWILMGFLVGNDFIPHLPHLHI 302
Query: 357 REGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQK--------R 408
A+ LL Y +GGY+ ++G + L R E+++ ++ ++ + F +
Sbjct: 303 NHDALPLLYGTYIAILPELGGYINESGHLNLPRFERYLVKLSDFDREHFSEVFVDLKWFE 362
Query: 409 TRIQQAY-------------EYNEAMKLNARRES---------------SEELLQAPVAV 440
+++ Y E K + S S + +
Sbjct: 363 SKVGNKYLNEAAGAAAEEAKNCKEKRKPKGQENSLSWAALDKSEGEGVASRDNFEDETED 422
Query: 441 ADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWF 500
D + YK YY K + D+ + YV+ + W+ YYY V SW W+
Sbjct: 423 DDLFETEFRQYKRTYYMTKMGVDVVS--DEFLANQAACYVQAIQWILHYYYHGVQSWSWY 480
Query: 501 YPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSP 560
YPYHYAPF SD++ +S L+I F LG+PF+PF+QL+ LP+AS + LP Y++LMT SP
Sbjct: 481 YPYHYAPFLSDIRSISTLKIHFELGKPFKPFEQLLAVLPSASKNLLPTCYQHLMTSEDSP 540
Query: 561 IYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVM---- 616
I ++YPPDF+ D+NGK+ W+ VV +PFIDE LL + L +EE RN
Sbjct: 541 IIEYYPPDFKTDLNGKQQEWEAVVLIPFIDETRLLEAMETCNHSLKKEERKRNQHSECLM 600
Query: 617 ------LDLLYVHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVN 655
+ Y P + I C Y + AW +D+N
Sbjct: 601 CWYDRDTEFTYSSPWPEKFPAIERCCTRYKMISLD---AWRVDIN 642
>gi|347971872|ref|XP_313715.5| AGAP004430-PA [Anopheles gambiae str. PEST]
gi|333469066|gb|EAA09254.6| AGAP004430-PA [Anopheles gambiae str. PEST]
Length = 1705
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 258/665 (38%), Positives = 360/665 (54%), Gaps = 100/665 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP F+R++++RYP + +++ E+ QV EFDNLYLDMNGII
Sbjct: 1 MGVPKFFRYMSERYPC-LSELLREN-QVP------------------EFDNLYLDMNGII 40
Query: 61 HPCFHPDGKPA--PTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C HP+ S + +F+ IF Y++++F L+RP+++ ++A+DGVAPRAKMNQQR R
Sbjct: 41 HNCSHPNDADVHFRISEEMIFEGIFHYVEYLFKLIRPQQVFFIAVDGVAPRAKMNQQRGR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RFR+A AEA+ E+ + + EE + E P DSN ITPGT FM L ALQ+F
Sbjct: 101 RFRSA---AEAQDLLEKAKAKGEEI-----SSESP--FDSNCITPGTSFMVRLQNALQHF 150
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
IQ ++ W+ VILS PGEGEHKIM YIR + PGF+PNTRHCLYGLDADLI
Sbjct: 151 IQVKIATDRLWKACTVILSGHETPGEGEHKIMEYIRHAKAQPGFNPNTRHCLYGLDADLI 210
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
ML L THE +FS+LRE + +K ++
Sbjct: 211 MLGLCTHERYFSLLREEVKFGKNDKKTSNLKEI--------------------------- 243
Query: 299 KKKYQFLNIWVLREYLQYELDIPNP--PFPINFERIVDDFVFLCFFVGNDFLPHMPTLEI 356
++ L++ +L EYL+ E FP + +++DD++ L + VGNDF+PHMP L I
Sbjct: 244 --RFYLLHLTLLSEYLELEFASVRDRLRFPFDIHKLIDDWILLVYLVGNDFIPHMPHLHI 301
Query: 357 REGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKR-------- 408
E A+ L Y M GY+ +AG + L R++ ++ +A ++ +F R
Sbjct: 302 NENALPTLYEAYMDVLPNMDGYINEAGILNLPRLQMLMRRLANFDRDMFLDRYTDLKYLE 361
Query: 409 ---------------TRIQQAYEYNE---AMKLNARRESSE-ELLQAPVAVADTVKLGE- 448
I A E ++ A+ +++ SE E APV + D E
Sbjct: 362 GKCGKNNLDAFDVDANEIIGASEMDKDLMALIMSSEMLDSEGEDNAAPVTLGDIENDPEL 421
Query: 449 -----PGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPY 503
YK YY K ++ E +V+ + Y+ L W YYY+ V SW W+YP+
Sbjct: 422 FEQEFKNYKRNYYMSKMGYADFTE--EVRAEQAECYIRALQWTLHYYYRGVVSWSWYYPH 479
Query: 504 HYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYK 563
HYAPF SD+ + + L++ + L PF PF QL+ LPAAS LP Y LMTDP+S +Y
Sbjct: 480 HYAPFISDVDNFAHLKLDYELARPFLPFQQLLSVLPAASKQHLPSAYHQLMTDPNSSVYD 539
Query: 564 FYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRN--SVMLDLLY 621
FYP +F D+NGK+ AW+ VV +PFIDEK LL+ + FLT+EE RN ML Y
Sbjct: 540 FYPVNFATDLNGKQQAWEAVVLIPFIDEKRLLKAMGPCDAFLTDEEKQRNVHGPMLKYQY 599
Query: 622 VHPQH 626
QH
Sbjct: 600 DTKQH 604
>gi|327267071|ref|XP_003218326.1| PREDICTED: 5'-3' exoribonuclease 1-like [Anolis carolinensis]
Length = 1744
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 256/706 (36%), Positives = 372/706 (52%), Gaps = 115/706 (16%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP FYRW+++RYP + VV+E Q+ EFDNLYLDMNGII
Sbjct: 1 MGVPKFYRWISERYPC-LSQVVKEH-QIP------------------EFDNLYLDMNGII 40
Query: 61 HPCFHPDGKPAP--TSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C HP+ S D +F IF Y++ +F +++PRK+ ++A+DGVAPRAKMNQQR R
Sbjct: 41 HQCSHPNDDDVHFRISEDKIFADIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RFR+AK+A E++++K E+ G+ L + + DSN ITPGT+FMA L L+YF
Sbjct: 101 RFRSAKEA------EDKIKKALEK-GETLPTEAR---FDSNCITPGTEFMARLHEHLKYF 150
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
+ +++ WQ V LS PGEGEHKIM +IR ++ P DPNTRHCLYGLDADLI
Sbjct: 151 VNMKISTDKSWQGVTVYLSGHETPGEGEHKIMEFIRSEKTKPDHDPNTRHCLYGLDADLI 210
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
+L L +HE HFS+LRE + G++ + VC ++T H
Sbjct: 211 ILGLTSHEPHFSLLREEVRFGGKKSQ-RVCAP----------------------EETTFH 247
Query: 299 KKKYQFLNIWVLREYLQYELD--IPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEI 356
L++ ++REY+ YE FP E+I+DD++ + F VGNDF+PH+P L I
Sbjct: 248 -----LLHLSLMREYIDYEFSPVKTKIKFPYEIEKIIDDWILMGFLVGNDFIPHLPHLHI 302
Query: 357 REGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQK--------R 408
A+ +L Y + GY+ + G + L R EK++ ++ ++ + F +
Sbjct: 303 NHDALPMLYRTYMAVLPELEGYINEKGHLNLPRFEKYLAKLSDFDREHFSEIFVDLKWFE 362
Query: 409 TRIQQAYEYNEAMKLNARRESSEELLQAPVAVAD--------------------TVKLGE 448
+++ Y NEA A + + +V + T E
Sbjct: 363 SKVGNKY-LNEAAGKAAEESKQHKKHKVSSSVQENSLYLAALEKPDGGNGVILKTTLEDE 421
Query: 449 P-----------GYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSW 497
P YK YY K + D D YV+ + W+ YYY V SW
Sbjct: 422 PEEDDLFETEFRQYKRAYYMTKMGVEVVS--DDFLADQAKCYVQAIQWILHYYYHGVQSW 479
Query: 498 QWFYPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDP 557
W+YPYHYAP+ SD++ + DL+I L +PF PF+QL+ LPAAS LP+ Y++LMT
Sbjct: 480 SWYYPYHYAPYLSDIRKIGDLKIYLDLEKPFMPFEQLLAVLPAASKDLLPKCYQHLMTSE 539
Query: 558 SSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVML 617
SPI +YP +F+ D+NGK+ W+ VV +PFIDEK LL + LT EE RN
Sbjct: 540 DSPIIDYYPTEFKTDLNGKQQEWEAVVLIPFIDEKQLLEAMEPCNKLLTTEERQRNRHSE 599
Query: 618 DLLYVHPQHPLYQQIT---------LYCQLYHQLPPQDRFAWEIDV 654
++Y+H + +Q ++ +C +++ D AW +D+
Sbjct: 600 CIMYLHDKDIDFQYLSPWPEKFPSIEHCHTRYKILSLD--AWLVDI 643
>gi|2281015|dbj|BAA21563.1| Dhm2 protein [Mus musculus]
Length = 1687
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 254/707 (35%), Positives = 370/707 (52%), Gaps = 113/707 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP FYRW+++RYP + +VV+E Q+ EFDNLYLDMNGII
Sbjct: 1 MGVPKFYRWISERYPC-LSEVVKEH-QIP------------------EFDNLYLDMNGII 40
Query: 61 HPCFHPDGKPAP--TSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C HP+ S D +F IF Y++ +F +++PRK+ ++A+DGVAPRAKMNQQR R
Sbjct: 41 HQCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRAR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RFR+AK+A E++++K E+ G+ L + + DSN ITPGT+FMA L L+YF
Sbjct: 101 RFRSAKEA------EDKIKKAIEK-GETLPTEAR---FDSNCITPGTEFMARLHEHLKYF 150
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
+ +++ WQ + S PGEGEHKIM +IR ++ P DPNTRHCLYGLDADLI
Sbjct: 151 VNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLI 210
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
ML L +HE HFS+LRE + G++ + VC ++T H
Sbjct: 211 MLGLTSHEAHFSLLREEVRFGGKKTQ-RVCAP----------------------EETTFH 247
Query: 299 KKKYQFLNIWVLREYLQYELDI--PNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEI 356
L++ ++REY+ YE F + E+I+DD++ + F VGNDF+PH+P L I
Sbjct: 248 -----LLHLSLMREYIDYEFSALKEKITFKYDIEKIIDDWILMGFLVGNDFIPHLPHLHI 302
Query: 357 REGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQK--------R 408
A+ LL Y +GGY+ ++G + L R E+++ ++ ++ + F +
Sbjct: 303 NHDALPLLYGTYIAILPELGGYINESGHLNLPRFERYLVKLSDFDREHFSEVFVDLKWFE 362
Query: 409 TRIQQAY-------------EYNEAMKLNARRES---------------SEELLQAPVAV 440
+++ Y E K + S S + +
Sbjct: 363 SKVGNKYLNEAAGAAAEEAKNCKEKRKPKGQENSLSWAALDKSEGEGVASRDNFEDETED 422
Query: 441 ADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWF 500
D + YK YY K + D+ + YV+ + W+ YYY V SW W+
Sbjct: 423 DDLFETEFRQYKRTYYMTKMGVDVVS--DEFLANQAACYVQAIQWILHYYYHGVQSWSWY 480
Query: 501 YPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSP 560
YPYHYAPF SD++ +S L+I F LG+PF+PF+QL+ LP+AS + LP Y++LMT SP
Sbjct: 481 YPYHYAPFLSDIRSISTLKIHFELGKPFKPFEQLLAVLPSASKNLLPTCYQHLMTSEDSP 540
Query: 561 IYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVM---- 616
I ++YPPDF+ D+NGK+ W+ VV +PFIDE LL + L +EE RN
Sbjct: 541 IIEYYPPDFKTDLNGKQQEWEAVVLIPFIDETRLLEAMETCNHSLKKEERKRNQHSECLM 600
Query: 617 ------LDLLYVHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVNAS 657
+ Y P + I C Y + AW +D+N +
Sbjct: 601 CWYDRDTEFTYSSPWPEKFPAIERCCTRYKMISLD---AWRVDINKN 644
>gi|395528095|ref|XP_003766167.1| PREDICTED: 5'-3' exoribonuclease 1 [Sarcophilus harrisii]
Length = 1695
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 251/663 (37%), Positives = 364/663 (54%), Gaps = 104/663 (15%)
Query: 48 EFDNLYLDMNGIIHPCFHPDGKPAP--TSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDG 105
EFDNLYLDMNGIIH C HP+ S D +F IF Y++ +F +++PRK+ ++A+DG
Sbjct: 13 EFDNLYLDMNGIIHQCSHPNDDDVHFRISDDKIFADIFHYLEVLFRIIKPRKVFFMAVDG 72
Query: 106 VAPRAKMNQQRTRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGT 165
VAPRAKMNQQR RRFRAAK+A E++++K E+ G++L + + DSN ITPGT
Sbjct: 73 VAPRAKMNQQRGRRFRAAKEA------EDKIKKALEK-GEILPTEAR---FDSNCITPGT 122
Query: 166 QFMAVLSAALQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPN 225
+FMA L L+YF+ +++ WQ + LS PGEGEHKIM +IR ++ P DPN
Sbjct: 123 EFMARLHEHLKYFVNMKISSDKSWQGVTIYLSGHETPGEGEHKIMEFIRSEKGKPDHDPN 182
Query: 226 TRHCLYGLDADLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDN 285
RHCLYGLDADLIML L +HE HFS+LRE + G++ + VC
Sbjct: 183 IRHCLYGLDADLIMLGLTSHESHFSLLREEVRFGGKKTQ-RVCAP--------------- 226
Query: 286 PADWNGVDDTPIHKKKYQFLNIWVLREYLQYELDI--PNPPFPINFERIVDDFVFLCFFV 343
++T H L++ ++REY+ YE F + ERI+DD++ + F V
Sbjct: 227 -------EETTFH-----LLHLSLMREYIDYEFSALKDKISFKYDIERIIDDWILMGFLV 274
Query: 344 GNDFLPHMPTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQ 403
GNDF+PH+P L I A+ LL Y +GGY+ + G + L R EK++ ++ ++ +
Sbjct: 275 GNDFIPHLPHLHINHDALPLLYRTYMTVLPELGGYINENGHLNLPRFEKYLIKLSDFDRE 334
Query: 404 IFQK--------RTRIQQAY-------------EYNE--------AMKLNARRESSEELL 434
F + +++ Y Y + +M L A ++ EE++
Sbjct: 335 HFSEVFVDLKWFESKVGNKYLNEAAGIAAEEAKNYKQKKLKGQENSMCLAALDKTEEEVM 394
Query: 435 QAPVAVADTVKLGEP-----------GYKERYYADKFEISNPEEI--DKVKKDVVLKYVE 481
+ V D EP YK YY K + EI D D YV+
Sbjct: 395 TSKSVVED-----EPEDDDLFETEFRQYKRTYYMTKMGV----EIVSDDFLADQAECYVQ 445
Query: 482 GLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAA 541
+ W+ YYY V SW W+YPYHYAP+ SD++++S+L+I F LG+PF PF+QL+ LPAA
Sbjct: 446 AIQWILHYYYHGVQSWSWYYPYHYAPYLSDIRNISELKIQFELGKPFMPFEQLLAVLPAA 505
Query: 542 SSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKL 601
S LP Y++LMT SPI ++YPPDF+ D+NGK+ W+ VV +PFIDE LL+ +
Sbjct: 506 SKDLLPGCYQHLMTSEDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDETRLLQAMESC 565
Query: 602 EVFLTEEELFRNSVMLDLLYVHPQHPLYQQITLY---------CQLYHQLPPQDRFAWEI 652
+L EEE RN L+Y Q ++ + + C+ +++ D AW +
Sbjct: 566 NKYLKEEEKKRNRHSECLMYWFDQDAGFKYPSPWPEKFLTIEKCRARYKIISLD--AWHV 623
Query: 653 DVN 655
D+N
Sbjct: 624 DIN 626
>gi|148688999|gb|EDL20946.1| 5'-3' exoribonuclease 1 [Mus musculus]
Length = 1685
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 254/707 (35%), Positives = 370/707 (52%), Gaps = 113/707 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP FYRW+++RYP + +VV+E Q+ EFDNLYLDMNGII
Sbjct: 1 MGVPKFYRWISERYPC-LSEVVKEH-QIP------------------EFDNLYLDMNGII 40
Query: 61 HPCFHPDGKPAP--TSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C HP+ S D +F IF Y++ +F +++PRK+ ++A+DGVAPRAKMNQQR R
Sbjct: 41 HQCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RFR+AK+A E++++K E+ G+ L + + DSN ITPGT+FMA L L+YF
Sbjct: 101 RFRSAKEA------EDKIKKAIEK-GETLPTEAR---FDSNCITPGTEFMARLHEHLKYF 150
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
+ +++ WQ + S PGEGEHKIM +IR ++ P DPNTRHCLYGLDADLI
Sbjct: 151 VNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLI 210
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
ML L +HE HFS+LRE + G++ + VC ++T H
Sbjct: 211 MLGLTSHEAHFSLLREEVRFGGKKTQ-RVCAP----------------------EETTFH 247
Query: 299 KKKYQFLNIWVLREYLQYELDI--PNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEI 356
L++ ++REY+ YE F + E+I+DD++ + F VGNDF+PH+P L I
Sbjct: 248 -----LLHLSLMREYIDYEFSALKEKITFKYDIEKIIDDWILMGFLVGNDFIPHLPHLHI 302
Query: 357 REGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQK--------R 408
A+ LL Y +GGY+ ++G + L R E+++ ++ ++ + F +
Sbjct: 303 NHDALPLLYGTYIAILPELGGYINESGHLNLPRFERYLVKLSDFDREHFSEVFVDLKWFE 362
Query: 409 TRIQQAY-------------EYNEAMKLNARRES---------------SEELLQAPVAV 440
+++ Y E K + S S + +
Sbjct: 363 SKVGNKYLNEAAGAAAEEAKNCKEKRKPKGQENSLSWAALDKSEGEGVASRDNFEDETED 422
Query: 441 ADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWF 500
D + YK YY K + D+ + YV+ + W+ YYY V SW W+
Sbjct: 423 DDLFETEFRQYKRTYYMTKMGVDVVS--DEFLANQAACYVQAIQWILHYYYHGVQSWSWY 480
Query: 501 YPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSP 560
YPYHYAPF SD++ +S L+I F LG+PF+PF+QL+ LP+AS + LP Y++LMT SP
Sbjct: 481 YPYHYAPFLSDIRSISTLKIHFELGKPFKPFEQLLAVLPSASKNLLPTCYQHLMTSEDSP 540
Query: 561 IYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVM---- 616
I ++YPPDF+ D+NGK+ W+ VV +PFIDE LL + L +EE RN
Sbjct: 541 IIEYYPPDFKTDLNGKQQEWEAVVLIPFIDETRLLEAMETCNHSLKKEERKRNQHSECLM 600
Query: 617 ------LDLLYVHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVNAS 657
+ Y P + I C Y + AW +D+N +
Sbjct: 601 CWYDRDTEFTYSSPWPEKFPAIERCCTRYKMISLD---AWRVDINKN 644
>gi|1894792|emb|CAA62820.1| 5'-3' exonuclease [Mus musculus]
Length = 1706
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 254/707 (35%), Positives = 370/707 (52%), Gaps = 113/707 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP FYRW+++RYP + +VV+E Q+ EFDNLYLDMNGII
Sbjct: 1 MGVPKFYRWISERYPC-LSEVVKEH-QIP------------------EFDNLYLDMNGII 40
Query: 61 HPCFHPDGKPAP--TSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C HP+ S D +F IF Y++ +F +++PRK+ ++A+DGVAPRAKMNQQR R
Sbjct: 41 HQCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RFR+AK+A E++++K E+ G+ L + + DSN ITPGT+FMA L L+YF
Sbjct: 101 RFRSAKEA------EDKIKKAIEK-GETLPTEAR---FDSNCITPGTEFMARLHEHLKYF 150
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
+ +++ WQ + S PGEGEHKIM +IR ++ P DPNTRHCLYGLDADLI
Sbjct: 151 VNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLI 210
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
ML L +HE HFS+LRE + G++ + VC ++T H
Sbjct: 211 MLGLTSHEAHFSLLREEVRFGGKKTQ-RVCAP----------------------EETTFH 247
Query: 299 KKKYQFLNIWVLREYLQYELDI--PNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEI 356
L++ ++REY+ YE F + E+I+DD++ + F VGNDF+PH+P L I
Sbjct: 248 -----LLHLSLMREYIDYEFSALKEKITFKYDIEKIIDDWILMGFLVGNDFIPHLPHLHI 302
Query: 357 REGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQK--------R 408
A+ LL Y +GGY+ ++G + L R E+++ ++ ++ + F +
Sbjct: 303 NHDALPLLYGTYIAILPELGGYINESGHLNLPRFERYLVKLSDFDREHFSEVFVDLKWFE 362
Query: 409 TRIQQAY-------------EYNEAMKLNARRES---------------SEELLQAPVAV 440
+++ Y E K + S S + +
Sbjct: 363 SKVGNKYLNEAAGAAAEEAKNCKEKRKPKGQENSLSWAALDKSEGEGVASRDNFEDETED 422
Query: 441 ADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWF 500
D + YK YY K + D+ + YV+ + W+ YYY V SW W+
Sbjct: 423 DDLFETEFRQYKRTYYMTKMGVDVVS--DEFLANQAACYVQAIQWILHYYYHGVQSWSWY 480
Query: 501 YPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSP 560
YPYHYAPF SD++ +S L+I F LG+PF+PF+QL+ LP+AS + LP Y++LMT SP
Sbjct: 481 YPYHYAPFLSDIRSISTLKIHFELGKPFKPFEQLLAVLPSASKNLLPTCYQHLMTSEDSP 540
Query: 561 IYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVM---- 616
I ++YPPDF+ D+NGK+ W+ VV +PFIDE LL + L +EE RN
Sbjct: 541 IIEYYPPDFKTDLNGKQQEWEAVVLIPFIDETRLLEAMETCNHSLKKEERKRNQHSECLM 600
Query: 617 ------LDLLYVHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVNAS 657
+ Y P + I C Y + AW +D+N +
Sbjct: 601 CWYDRDTEFTYSSPWPEKFPAIERCCTRYKMISLD---AWRVDINKN 644
>gi|361125661|gb|EHK97694.1| putative 5'-3' exoribonuclease 2 [Glarea lozoyensis 74030]
Length = 1008
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 211/417 (50%), Positives = 279/417 (66%), Gaps = 6/417 (1%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPA +RWL+ +YP +V + + +GV PVD PNPNG EFDNLYLDMNGI+
Sbjct: 1 MGVPALFRWLSQKYP----KIVSGEQPREIDGVQIPVDTRGPNPNGEEFDNLYLDMNGIV 56
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ +P P +++ IF Y D + +VRPRKLL +AIDGVAPRAKMNQQR+RRF
Sbjct: 57 HPCSHPEDRPPPKDEEEMMLEIFKYTDRVVNMVRPRKLLLIAIDGVAPRAKMNQQRSRRF 116
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQ 180
R+A++A E EA++ L K + G + DSN ITPGT FM +L+++L+Y+I
Sbjct: 117 RSAQEAKEKEADKAELAKMLKSQGGRTEDAAVKKAFDSNEITPGTPFMDILASSLRYWIA 176
Query: 181 ARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
+LN P W KVI+SD+ VPGEGEHKIM +IR QR+ P DPNTRH +YGLDADLIML
Sbjct: 177 LKLNTDPAWAKMKVIISDSTVPGEGEHKIMEFIRSQRSSPDHDPNTRHVIYGLDADLIML 236
Query: 241 SLATHEIHFSILRE-VITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIHK 299
LATHE HF +LRE V + C +CGQ GH A EC G+ D++ D P
Sbjct: 237 GLATHEPHFRVLREDVFAQDSKPRTCHMCGQAGHEARECTGQAKVKDGDFDEKDSAPA-L 295
Query: 300 KKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREG 359
K + +L++ +LREYL+ EL +P+ PF + ER +DD+VF+CFFVGNDFLPH+P+LEIRE
Sbjct: 296 KPFIWLHVSILREYLEAELYVPSQPFRFDLERALDDWVFMCFFVGNDFLPHLPSLEIREN 355
Query: 360 AINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYE 416
I+ L+ ++R MGGYLT G V L+R + ++ +A ED IF++R + E
Sbjct: 356 GIDTLIAIWRDNIPFMGGYLTKDGHVDLERAQLILEGLAKQEDAIFRRRKETEDRRE 412
Score = 192 bits (488), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 105/253 (41%), Positives = 150/253 (59%), Gaps = 8/253 (3%)
Query: 442 DTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFY 501
D V+L + GY +RYY+ KF++ +P +I+ + V YVEGL WV YY+Q SW W+Y
Sbjct: 567 DNVRLWDEGYADRYYSQKFDV-HPSDIE-FRHKVARAYVEGLAWVLLYYFQGCPSWDWYY 624
Query: 502 PYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPI 561
PYHYAPFA+D DL D+ I+F G FRP++QLMG LPAAS A+P + LMT+P S I
Sbjct: 625 PYHYAPFAADFVDLKDMTISFNKGRIFRPYEQLMGVLPAASRQAIPPAFHELMTNPDSEI 684
Query: 562 YKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLY 621
FYP DF +D+NGK+FAWQGV LPFID + LL+ K+ L + RN V D L
Sbjct: 685 IDFYPEDFVVDLNGKKFAWQGVALLPFIDSERLLQAMAKVYPTLAPDVAARNVVGKDALL 744
Query: 622 VHPQH-PLYQQITLYCQLYHQLPPQDRFAWEIDVNASGGMNGYIWLCERNGLRSIIPSPV 680
+ H LY + + Y + Q ++D AS G+ G + E + S + P+
Sbjct: 745 IAEAHEELYSHVA--AKFYSKK--QGDSVVKLDPRASEGLTGIVEKNEAHIPHSSLSFPL 800
Query: 681 K-GLPDIERNQAM 692
+P ++ ++++
Sbjct: 801 SDAMPSLDDDRSI 813
>gi|440911591|gb|ELR61240.1| 5'-3' exoribonuclease 2, partial [Bos grunniens mutus]
Length = 926
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 211/385 (54%), Positives = 275/385 (71%), Gaps = 2/385 (0%)
Query: 32 GVARPVDVSKPNPNGMEFDNLYLDMNGIIHPCFHPDGKPAPTSYDDVFKSIFDYIDHIFL 91
GV PVD SKPNPN +EFDNLYLDMNGIIHPC HP+ KPAP + D++ +IF+YID +F
Sbjct: 6 GVKIPVDASKPNPNDVEFDNLYLDMNGIIHPCTHPEDKPAPKNEDEMMVAIFEYIDRLFN 65
Query: 92 LVRPRKLLYLAIDGVAPRAKMNQQRTRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKE 151
+VRPR+LLY+AIDGVAPRAKMNQQR+RRFRA+K+ EAE E++R+R+E G L +E
Sbjct: 66 IVRPRRLLYMAIDGVAPRAKMNQQRSRRFRASKEGMEAEIEKQRVREEILAKGGYLPPEE 125
Query: 152 KPETCDSNVITPGTQFMAVLSAALQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMS 211
E DSN ITPGT+FM L+ L+Y+I RLN PGW+ VILSDA+ PGEGEHKIM
Sbjct: 126 IKERFDSNCITPGTEFMDNLAKCLRYYIADRLNNDPGWKNLTVILSDASAPGEGEHKIMD 185
Query: 212 YIRLQRNLPGFDPNTRHCLYGLDADLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQV 271
YIR QR P DPNT HCL G DADLIML LATHE +F+I+RE P + + C +C Q
Sbjct: 186 YIRRQRAQPNHDPNTHHCLCGADADLIMLGLATHEPNFTIIREEFK-PNKPKPCGLCNQF 244
Query: 272 GHLAAECHGKPGDNPADWNGVDDT-PIHKKKYQFLNIWVLREYLQYELDIPNPPFPINFE 330
GH +C G P + + + D+ P + ++ F+ + VLREYL+ EL + + PF + E
Sbjct: 245 GHDVKDCEGLPREKKGKHDELADSLPCAEGEFIFIRLSVLREYLERELTMASLPFTFDVE 304
Query: 331 RIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRV 390
R +DD+VF+CFFVGNDFLPH+P+LEIREGAI+ L+++Y+ GGYLT++G V L RV
Sbjct: 305 RSIDDWVFMCFFVGNDFLPHLPSLEIREGAIDRLVNIYKNVVHKTGGYLTESGYVNLQRV 364
Query: 391 EKFIQSVAVYEDQIFQKRTRIQQAY 415
+ + +V ED IF+KR + ++
Sbjct: 365 QMIMLAVGEVEDSIFKKRKDDEDSF 389
Score = 208 bits (529), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 100/192 (52%), Positives = 133/192 (69%), Gaps = 3/192 (1%)
Query: 442 DTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFY 501
D V+L E G+K+RYY +KF++ +E K ++ VV YVEGLCWV RYYYQ SW+W+Y
Sbjct: 482 DNVRLWEAGWKQRYYKNKFDVDAADE--KFRRKVVQSYVEGLCWVLRYYYQGCASWKWYY 539
Query: 502 PYHYAPFASDLKDLSDLEITFFLG-EPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSP 560
P+HYAPFASD + ++D+ F G +PF+P +QLMG PAAS + LP +R LM+DP S
Sbjct: 540 PFHYAPFASDFEGIADMPSDFEKGTKPFKPLEQLMGVFPAASGNFLPPSWRKLMSDPDSS 599
Query: 561 IYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLL 620
I FYP DF ID+NGKR+AWQGV LPF+DE+ L +++ LT EE RNS+ D+L
Sbjct: 600 IIDFYPEDFAIDLNGKRYAWQGVALLPFVDERRLRAALEEVYPDLTPEETRRNSLGGDVL 659
Query: 621 YVHPQHPLYQQI 632
+V HPL+ I
Sbjct: 660 FVGKHHPLHDFI 671
>gi|85078982|ref|XP_956265.1| hypothetical protein NCU01643 [Neurospora crassa OR74A]
gi|74630414|sp|Q8WZX5.3|XRN2_NEUCR RecName: Full=5'-3' exoribonuclease 2
gi|18307456|emb|CAD21516.1| related to dna exoribonuclease Dhp1p [Neurospora crassa]
gi|28917321|gb|EAA27029.1| hypothetical protein NCU01643 [Neurospora crassa OR74A]
Length = 1072
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 207/422 (49%), Positives = 278/422 (65%), Gaps = 7/422 (1%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MG+PA +RWL+ +YP I V+E+ P +G PVD +KPNPNG EFDNLYLDMNGI+
Sbjct: 1 MGIPAAFRWLSTKYPKIISPVIEDQPITMPDGTVIPVDATKPNPNGEEFDNLYLDMNGIV 60
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ +PAP +++ +F Y D + +VRPRKLL +A+DGVAPRAKMNQQR+RRF
Sbjct: 61 HPCSHPEDRPAPKDEEEMMVEVFKYTDRVVNMVRPRKLLMIAVDGVAPRAKMNQQRSRRF 120
Query: 121 RAAKDAAEAEAEEERL-----RKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAAL 175
RAA++A E E ++++ ++ + + + DSN ITPGT FM +L+A+L
Sbjct: 121 RAAREAMEKEEDKQKFVELLKKQNGKPQEEEPVEVVVKKAFDSNSITPGTPFMDILAASL 180
Query: 176 QYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDA 235
+Y+ +LN P W KVI+SDA VPGEGEHKIM ++R QR P DPNTRH +YGLDA
Sbjct: 181 RYWCSYKLNTDPAWANIKVIISDATVPGEGEHKIMEFVRSQRGSPNHDPNTRHVIYGLDA 240
Query: 236 DLIMLSLATHEIHFSILRE-VITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDD 294
DLIML LATHE HF +LRE V + C +CGQ GH A C G+ + +++ D
Sbjct: 241 DLIMLGLATHEPHFRVLREDVFAQDSRPRLCKICGQKGHDAMNCKGEAKEKNGEFD-EKD 299
Query: 295 TPIHKKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTL 354
+ K + +L++ +LREYL ELD+P PF N ER +DD+VF+CFFVGNDFLPH+P L
Sbjct: 300 AVVPLKPFIWLHVSILREYLAIELDVPGLPFQFNLERAIDDWVFMCFFVGNDFLPHLPAL 359
Query: 355 EIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQA 414
EIRE I+ L +++ MGGYLT G L+RV+ + +A ED IF++R +
Sbjct: 360 EIRENGIDTLTAIWKDNLPVMGGYLTKDGHADLERVQYIMAGLAKQEDAIFRRRKETEDR 419
Query: 415 YE 416
E
Sbjct: 420 RE 421
Score = 192 bits (489), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 104/234 (44%), Positives = 139/234 (59%), Gaps = 7/234 (2%)
Query: 432 ELLQAPVAVADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYY 491
E+ ++ D+V+L E GY +RYY KF++ ++ID + V Y EGL WV YY+
Sbjct: 568 EISESDAEPTDSVRLWEEGYADRYYEQKFKVDR-KDID-FRHKVGRAYAEGLAWVLEYYF 625
Query: 492 QDVCSWQWFYPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYR 551
Q SW+WFYPYHYAPFA+D DL +EI F G RPF+QLM LPAAS A+PE +
Sbjct: 626 QGCPSWEWFYPYHYAPFAADFVDLGKMEIKFEKGRISRPFEQLMSVLPAASRHAIPEVFH 685
Query: 552 NLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELF 611
+LM + +S I FYP DF+ID+NGK+ AWQGV LPFID LL + L+ E+
Sbjct: 686 SLMLEETSEIRHFYPDDFEIDLNGKKMAWQGVALLPFIDMPRLLAAMETKSHLLSPEDHL 745
Query: 612 RNSVMLDLLYVHPQHP-LYQQITLYCQLYHQLPPQDRFAWEIDVNASGGMNGYI 664
RN+ D L + HP LY IT Q Y + +F E+D S G++G +
Sbjct: 746 RNAPGKDYLLLSDSHPTLYDHIT--SQFYSKKQGTTKF--ELDPTKSAGLSGLV 795
>gi|417413149|gb|JAA52920.1| Putative 5'-3' exonuclease xrn1/kem1/sep1 involved in dna strand
exchange and mrna turnover, partial [Desmodus rotundus]
Length = 926
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 211/385 (54%), Positives = 274/385 (71%), Gaps = 2/385 (0%)
Query: 32 GVARPVDVSKPNPNGMEFDNLYLDMNGIIHPCFHPDGKPAPTSYDDVFKSIFDYIDHIFL 91
GV PVD SKPNPN +EFDNLYLDMNGIIHPC HP+ KPAP + D++ +IF+YID +F
Sbjct: 7 GVKIPVDASKPNPNDVEFDNLYLDMNGIIHPCTHPEDKPAPKNEDEMMVAIFEYIDRLFS 66
Query: 92 LVRPRKLLYLAIDGVAPRAKMNQQRTRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKE 151
+VRPR+LLY+AIDGVAPRAKMNQQR+RRFRA+K+ EA E++R+R+E G L +E
Sbjct: 67 IVRPRRLLYMAIDGVAPRAKMNQQRSRRFRASKEGMEAAVEKQRVREEILAKGGFLPPEE 126
Query: 152 KPETCDSNVITPGTQFMAVLSAALQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMS 211
E DSN ITPGT+FM L+ L+Y+I RLN PGW+ VILSDA+ PGEGEHKIM
Sbjct: 127 IKERFDSNCITPGTEFMDNLAKCLRYYIADRLNNDPGWKNLTVILSDASAPGEGEHKIMD 186
Query: 212 YIRLQRNLPGFDPNTRHCLYGLDADLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQV 271
YIR QR P DPNT HCL G DADLIML LATHE +F+I+RE P + + C +C Q
Sbjct: 187 YIRRQRAQPNHDPNTHHCLCGADADLIMLGLATHEPNFTIIREEFK-PNKPKPCGLCNQF 245
Query: 272 GHLAAECHGKPGDNPADWNGVDDT-PIHKKKYQFLNIWVLREYLQYELDIPNPPFPINFE 330
GH +C G P + + + D+ P + ++ FL + VLREYL+ EL + + PF + E
Sbjct: 246 GHEVKDCEGLPREKMGKHDELADSLPCTEGEFIFLRLNVLREYLERELTMASLPFTFDVE 305
Query: 331 RIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRV 390
R +DD+VF+CFFVGNDFLPH+P+LEIREGAI+ L+++Y+ GGYLT++G V L RV
Sbjct: 306 RSIDDWVFMCFFVGNDFLPHLPSLEIREGAIDRLVNIYKNVVHKTGGYLTESGYVNLQRV 365
Query: 391 EKFIQSVAVYEDQIFQKRTRIQQAY 415
+ + +V ED IF+KR + ++
Sbjct: 366 QMIMLAVGEVEDSIFKKRKDDEDSF 390
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 115/253 (45%), Positives = 155/253 (61%), Gaps = 10/253 (3%)
Query: 442 DTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFY 501
D V+L E G+K+RYY +KF++ +E K ++ VV YVEGLCWV RYYYQ SW+W+Y
Sbjct: 483 DNVRLWEAGWKQRYYKNKFDVDAADE--KFRRKVVQSYVEGLCWVLRYYYQGCASWKWYY 540
Query: 502 PYHYAPFASDLKDLSDLEITFFLG-EPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSP 560
P+HYAPFASD + ++D+ F G +PF+P +QLMG PAAS + LP +R LM+DP S
Sbjct: 541 PFHYAPFASDFEGIADMPSDFEKGTKPFKPLEQLMGVFPAASGNFLPPSWRKLMSDPDSS 600
Query: 561 IYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLL 620
I FYP DF ID+NGK++AWQGV LPF+DE+ L +++ LT EE RNS+ D+L
Sbjct: 601 IIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEETKRNSLGSDVL 660
Query: 621 YVHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVNASGGMNGYIWLCERNGL-RSIIPSP 679
+V HPLY I Q P ++ G+ G L E L I+ SP
Sbjct: 661 FVGKYHPLYDFIVELYQTGSTEP------VDLPPELCHGIQGKFSLDEEAILPDQIVSSP 714
Query: 680 VKGLPDIERNQAM 692
V L D+ +N A+
Sbjct: 715 VPVLRDLTQNTAI 727
>gi|402074937|gb|EJT70408.1| 5'-3' exoribonuclease 2 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 1040
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 214/436 (49%), Positives = 288/436 (66%), Gaps = 10/436 (2%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MG+PA +RWL+ +YP I V+E+ P +G PVD +KPNPNG EFDNLYLDMNGI+
Sbjct: 1 MGIPAAFRWLSTKYPKIISPVIEDKPIEMDDGTVIPVDTAKPNPNGEEFDNLYLDMNGIV 60
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ +PAP +++ IF Y D + +VRPRK+L +A+DGVAPRAKMNQQR+RRF
Sbjct: 61 HPCAHPEDRPAPKDEEEMMLEIFRYTDRVVNMVRPRKVLMIAVDGVAPRAKMNQQRSRRF 120
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETC-----DSNVITPGTQFMAVLSAAL 175
R+A++A E ++ L K ++ A E E+ D+N ITPGT FM +L+A+L
Sbjct: 121 RSAQEAKEKAEDKMELLKLLKQQNGGDVAPETLESVTKKAFDTNSITPGTPFMLILAASL 180
Query: 176 QYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDA 235
+Y+ +LN P W K+I+SDA VPGEGEHKIM ++R QR+ P DPNTRH +YGLDA
Sbjct: 181 RYWCAYKLNTDPAWANLKIIISDATVPGEGEHKIMDFVRSQRSSPDHDPNTRHVIYGLDA 240
Query: 236 DLIMLSLATHEIHFSILRE-VITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDD 294
DLIML LATHE HF +LRE V G+ C +CGQ GH A C G+ +++ +
Sbjct: 241 DLIMLGLATHEPHFRVLREDVFAQQGKARMCKLCGQKGHDAQNCRGEAKKKEGEFDEKEK 300
Query: 295 T-PIHKKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPT 353
P+ K + +L++ VLREYL EL++ N PF + ER VDD++FLC FVGNDFLPH+P
Sbjct: 301 AEPL--KPFIWLHVSVLREYLAVELEVSNLPFRFDLERAVDDWIFLCCFVGNDFLPHLPA 358
Query: 354 LEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQ 413
LEIRE IN L ++++R MGGY+T G + L+R++ + +A ED IF+KR +
Sbjct: 359 LEIRENGINTLTNIWKRNLATMGGYVTKDGHIDLERIQVIMNGLAQQEDSIFRKRKESED 418
Query: 414 AYEYN-EAMKLNARRE 428
E N + KL RE
Sbjct: 419 RKEANAKRRKLQDDRE 434
Score = 183 bits (465), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 93/195 (47%), Positives = 126/195 (64%), Gaps = 3/195 (1%)
Query: 442 DTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFY 501
DTV++ E GY +RYY KF ++P+++ + V YVEGL WV YY+Q SW+W+Y
Sbjct: 565 DTVRMWESGYSDRYYEQKFH-ADPKDVG-FRHKVAHAYVEGLAWVLLYYFQGCPSWEWYY 622
Query: 502 PYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPI 561
PYHYAPFA+D + L+DL+I+F G RP++QLM LPAAS LP + +LMT+ S I
Sbjct: 623 PYHYAPFAADFQGLADLKISFEKGRTSRPYEQLMSVLPAASRDNLPPVFHDLMTNEDSEI 682
Query: 562 YKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLY 621
FYP DF++D+NGK+FAWQGVV LPFI+ LL + LT EE RN V ++L
Sbjct: 683 IDFYPEDFELDLNGKKFAWQGVVLLPFIEMDRLLAAVEAKYPLLTPEEAARNGVGKEVLI 742
Query: 622 VHPQHP-LYQQITLY 635
+ H LY+ I +
Sbjct: 743 LSDAHEGLYEDIITH 757
>gi|397628044|gb|EJK68715.1| hypothetical protein THAOC_10078 [Thalassiosira oceanica]
Length = 1579
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 265/654 (40%), Positives = 355/654 (54%), Gaps = 97/654 (14%)
Query: 6 FYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGIIHPCFH 65
FYRWL++RYP I V+ + + EFD+LYLDMNGIIH C H
Sbjct: 63 FYRWLSERYP-KINQVITNEALLP------------------EFDHLYLDMNGIIHGCTH 103
Query: 66 P---DGKPAPTSYDDVFKSIFDYIDHIFL-LVRPRKLLYLAIDGVAPRAKMNQQRTRRFR 121
P D T D V I Y+D I +V+P+ +++AIDGVAPRAK+NQQR+RRFR
Sbjct: 104 PNHLDVSDVLTERDMVL-GIMHYLDRIITQIVKPKVSVFMAIDGVAPRAKLNQQRSRRFR 162
Query: 122 AAKDAAEAEAEEERLRKEFEEAGKLLSAKEKP--ETCDSNVITPGTQFMAVLSAALQYFI 179
+AKD AEA E +RLR + A P DSN ITPGT+F+ +S ++YFI
Sbjct: 163 SAKDLAEATKEAQRLRP-------IDGADPDPYAGAFDSNCITPGTEFLLRISNCIRYFI 215
Query: 180 QARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIM 239
+ ++ + P W+ VI S VPGEGEHKIM +IR RN G+ PNTRHC+YG DADLIM
Sbjct: 216 RKKIKEDPLWRNLSVIFSGPEVPGEGEHKIMQHIRDMRNQLGYRPNTRHCMYGQDADLIM 275
Query: 240 LSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIHK 299
L L +HE HF++LRE+I G G D N + +
Sbjct: 276 LGLVSHEPHFTLLREIIDFSG----------------------GFGRND-NALKEVKKFT 312
Query: 300 KK--YQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIR 357
K+ +Q L++ +LREYL+ E + + ERI+DDFVF+ F VGNDFLPHMPTL+I
Sbjct: 313 KQSDFQLLHLSILREYLEIEFAYQHDQSTYDLERIIDDFVFMTFLVGNDFLPHMPTLDIG 372
Query: 358 EGAINLLMHVYR--REFTAMGGYLTDAGEVLL-DRVEKFIQSVAVYEDQIFQKRTRIQQA 414
+GA LL YR R G YLTD+GE+ R+E F++ + E +IF++R + +
Sbjct: 373 DGAFTLLFDTYREQRARWGNGQYLTDSGEIPNPARLEAFLKVIGAAETEIFEERAKNEVV 432
Query: 415 YEYN-----------------EAMKLNARRESSEELL----QAPVAVADTVKLG------ 447
E ++ A ++S + A V+ V G
Sbjct: 433 MRKKQRRWDKRDGKSSMPSDLEIAEVEASKQSDYNAMVRSMMADVSSGTQVVEGWKQVGE 492
Query: 448 -EPGYKERYYADKFEISNPEEIDKVKKDVVLK-YVEGLCWVCRYYYQDVCSWQWFYPYHY 505
E +K RYY +K ++ + +D + K Y+EGL W YYY+ SW WF+PYHY
Sbjct: 493 SEKDHKGRYYYEKLQL---KPVDIAGHLALRKSYIEGLIWCLAYYYRGCISWGWFFPYHY 549
Query: 506 APFASDLKDLSDL--EITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYK 563
P SDL +L + I F +G+P +PF+QLMG LP ASS+ +P YR LM+ P SPI +
Sbjct: 550 GPMISDLTNLPAVFQSIRFEIGQPLKPFEQLMGCLPPASSALVPRIYRQLMSSPESPIKQ 609
Query: 564 FYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKL--EVFLTEEELFRNSV 615
+YP F +DMNGKR W+GV LPFID L K + LT EE RN V
Sbjct: 610 YYPNSFVVDMNGKRNPWEGVNILPFIDANRLKDAIKDNCPDRLLTAEERNRNRV 663
>gi|340729609|ref|XP_003403090.1| PREDICTED: LOW QUALITY PROTEIN: 5'-3' exoribonuclease 1-like
[Bombus terrestris]
Length = 1626
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 244/652 (37%), Positives = 352/652 (53%), Gaps = 99/652 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MG+P F+R++++RYP + +D Q+ EFDNLYLD+NGII
Sbjct: 1 MGIPKFFRYISERYPCLTEKL--KDYQIP------------------EFDNLYLDVNGII 40
Query: 61 HPCFHPDGKPAP--TSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C HPD S + +FK+IF YI+ +F +++P+KL ++A+DGVAPRAK+NQQR+R
Sbjct: 41 HDCSHPDDMDITFRISEETIFKNIFHYIEVLFRMIQPQKLFFIAVDGVAPRAKINQQRSR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RF+ AKDA E ++A + K + DSN ITPGT FM+ L L+YF
Sbjct: 101 RFKNAKDAKIQE----------DKAKIKGTTLPKEKRFDSNCITPGTVFMSKLDEQLKYF 150
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
I +++ WQ KVI S + VPGEGEHKIM YIR + +D NT+HCLYGLDADLI
Sbjct: 151 ITYKISTDKLWQKCKVIFSGSQVPGEGEHKIMDYIRYMKTQANYDVNTKHCLYGLDADLI 210
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
ML L THE+HF++LRE +T +Q K VC L E
Sbjct: 211 MLGLCTHEVHFTLLREEVTFGKKQXK--VC-----LTPE--------------------- 242
Query: 299 KKKYQFLNIWVLREYLQYELDI--PNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEI 356
+ K+ ++ +LREY+ +E PFP N E I+DD++ + F +GNDF+PH+P L I
Sbjct: 243 ETKFCLFHLSLLREYINHEFSSLKEKLPFPYNLENIIDDWILMGFLIGNDFIPHLPNLHI 302
Query: 357 REGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYE----DQIFQKRTRIQ 412
GA+++L VY + GY+ + G + LDR EKF++ ++ ++ + + ++
Sbjct: 303 VHGALSVLYQVYMDVMPTLDGYINETGTLRLDRFEKFMERLSRFDTLQFSEYYADLKYLE 362
Query: 413 QAYEYNEAMKLNARRESSEELLQAPVAVAD--------------TVKLGEPGY------- 451
E N +R S E ++P + D T K + Y
Sbjct: 363 SKTGRTETENSNDKRSGSTEETRSPRKMQDKEFDALLRSAADMSTGKYDDDEYGDDKSDC 422
Query: 452 ----------KERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFY 501
K+ YY +K + N +E + YV + W YYY CSW W+Y
Sbjct: 423 EMYTMEFVQCKKDYYINKLKYENIDE--DFLRSQAEGYVRAIQWNLNYYYNGCCSWSWYY 480
Query: 502 PYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPI 561
P+HYAP+ SD+KD DL++ F LGEPF PF+QL+ LP+ S LP ++ L+T+ SPI
Sbjct: 481 PHHYAPYISDIKDFKDLKLEFDLGEPFLPFEQLLAVLPSYSKDLLPPAFQTLLTEDQSPI 540
Query: 562 YKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRN 613
K+YP +F+ D+NGK W+ VV +PFI+EK ++ +T EE RN
Sbjct: 541 IKYYPTNFETDLNGKEQEWEAVVLIPFINEKDIVDAMAPHYPQITPEERARN 592
>gi|400592939|gb|EJP60965.1| XRN 5'-3' exonuclease [Beauveria bassiana ARSEF 2860]
Length = 968
Score = 427 bits (1097), Expect = e-116, Method: Compositional matrix adjust.
Identities = 207/414 (50%), Positives = 285/414 (68%), Gaps = 7/414 (1%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MG+PA +RWL+++YP I VVE+ P V +G PVD+++ NPNG E DNLYLDMNGI+
Sbjct: 1 MGIPAAFRWLSNKYPKIISPVVEDRPIVMDDGTEIPVDITRANPNGEELDNLYLDMNGIV 60
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ KPAP +++ IF Y D + +VRPRK+L +A+DGVAPRAKMNQQR+RRF
Sbjct: 61 HPCAHPEDKPAPKDEEEMMLEIFKYTDRVVNMVRPRKILMIAVDGVAPRAKMNQQRSRRF 120
Query: 121 RAAKDAAEAEAEEERLRKEF-EEAGKLLSAKEKPETC----DSNVITPGTQFMAVLSAAL 175
R+A++A E E +++ L K ++ G L+A+ D+N ITPGT FM +L+++L
Sbjct: 121 RSAQEAKEKENDKQELIKLLKQQNGGSLTAESTESVTKKAFDNNSITPGTPFMDILASSL 180
Query: 176 QYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDA 235
+Y+ Q +LN PGW KVI+SDA VPGEGEHKIM+++R QR P +DPNTRH +YGLDA
Sbjct: 181 RYWCQYKLNTDPGWAKLKVIISDATVPGEGEHKIMNFVRSQRASPDYDPNTRHVIYGLDA 240
Query: 236 DLIMLSLATHEIHFSILREVITLPGQQEK-CFVCGQVGHLAAECHGKPGDNPADWNGVDD 294
DLIML LATHE HF +LRE + + + C +CGQ GH A C G+ + P + +
Sbjct: 241 DLIMLGLATHEPHFRVLREDVFFQDSKARACKLCGQKGHDAQNCKGETKE-PTEEFDAKN 299
Query: 295 TPIHKKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTL 354
+ K + +L++ VLREYL EL IP PF + ER++DD++F+C FVGNDFLPH+P L
Sbjct: 300 NALTLKPFIWLHVSVLREYLAAELAIPELPFRFDLERVIDDWIFMCCFVGNDFLPHLPAL 359
Query: 355 EIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKR 408
EIRE I+ L +++R A+GGY+T G + L+R + + +A ED IF+KR
Sbjct: 360 EIREHGIDTLTTIWKRNLPALGGYITKDGHIDLERAQCILDGLAGQEDMIFKKR 413
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 107/259 (41%), Positives = 151/259 (58%), Gaps = 9/259 (3%)
Query: 437 PVAVADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCS 496
P AD V+L E GY +RYY KF +P +I + V YVEGL WV +YY+Q S
Sbjct: 556 PETPADPVRLWEDGYADRYYQLKFH-RDPGDI-SFRTHVAHAYVEGLAWVLQYYFQGCPS 613
Query: 497 WQWFYPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTD 556
W+W+YPYHYAPFA+D KD+S +TF G RPF+QLM LPAAS LPE + +LMTD
Sbjct: 614 WEWYYPYHYAPFAADFKDISQANVTFEKGTVSRPFEQLMSVLPAASRDNLPEVFHSLMTD 673
Query: 557 PSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVM 616
S I FYP +F++D+NGK+ AWQGV LPFI+ LL +K L++E+ RN V
Sbjct: 674 QDSLIIDFYPEEFEVDLNGKKMAWQGVALLPFIEMDRLLAAVQKRYPLLSDEDRKRNGVG 733
Query: 617 LDLLYVHPQH-PLYQQITLYCQLYHQLPPQDRFAWEIDVNASGGMNGYIWLCERNGLRSI 675
D+L + H +Y +I Y + Q + ++ S G++GY+ E
Sbjct: 734 RDVLLLSDSHESIYDEI--LTNFYSK--KQGSTQFRLNPKTSDGLSGYVEKQEGYVPHGT 789
Query: 676 IPSPV--KGLPDIERNQAM 692
+ P+ K +PD++ +++M
Sbjct: 790 LHYPLERKSMPDLDYDRSM 808
>gi|452983794|gb|EME83552.1| hypothetical protein MYCFIDRAFT_196796 [Pseudocercospora fijiensis
CIRAD86]
Length = 823
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 220/460 (47%), Positives = 296/460 (64%), Gaps = 26/460 (5%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDP----QVDGEGVARPVDVSKPNPNGMEFDNLYLDM 56
MGVPA +RWL+ +YP I VVEE P DG P+D PNPNG E DNLYLDM
Sbjct: 1 MGVPALFRWLSKKYPKIISPVVEEQPGEIANEDGSVTKIPIDARGPNPNGEEMDNLYLDM 60
Query: 57 NGIIHPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQR 116
NGI+HPC HP+ +P P + +++ +IF+Y + + +VRPRKLL +A+DGVAPRAKMNQQR
Sbjct: 61 NGIVHPCSHPEDRPPPANEEEMMVAIFEYTERVVNMVRPRKLLMIAVDGVAPRAKMNQQR 120
Query: 117 TRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEK----PETCDSNVITPGTQFMAVLS 172
+RRFR+A++AAE +A AG+ EK +T DSN ITPGT FM +L+
Sbjct: 121 SRRFRSAQEAAEKDAMAAEFHARMVAAGEAGGDDEKNSKPKKTWDSNSITPGTPFMDLLA 180
Query: 173 AALQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYG 232
A+L+Y+I +L P W+ KVI+SDA VPGEGEHKIM+++R QR+ P DPNTRH +YG
Sbjct: 181 ASLRYWISYKLTTDPAWEKLKVIISDATVPGEGEHKIMNFVRSQRSSPDHDPNTRHVIYG 240
Query: 233 LDADLIMLSLATHEIHFSILREVI----TLPGQQEKCFVCGQVGHLAAECHGKPGDNPAD 288
LDADLIML LATHE HF +LRE + T PG C C Q GH+AA C GKP +
Sbjct: 241 LDADLIMLGLATHEPHFRVLREDVFANDTKPGH---CRKCNQPGHIAANCTGKPKEE--- 294
Query: 289 WNGVDDTPIHKKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFL 348
+D K + +L++ +LREYL E+ +PN F + ER +DD+VF+CFFVGNDFL
Sbjct: 295 ----EDVVKPLKPFIWLHVGILREYLAVEMCVPNQGFRFDLERALDDWVFMCFFVGNDFL 350
Query: 349 PHMPTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKR 408
PH+P+L+IRE I+ L+ ++R MGGY+T G V L R + ++ +A ED IF++R
Sbjct: 351 PHLPSLDIREDGIDTLIAIWRDNLPLMGGYVTKDGHVDLARAQMILEGLAKQEDAIFKRR 410
Query: 409 TRIQ-QAYEYNEAMKLNARRESSEELL---QAPVAVADTV 444
+ +A E + + RR+S++ AP +TV
Sbjct: 411 RETEVKAAERQKQREDRERRQSNKRARYSNGAPTGFDETV 450
>gi|195479788|ref|XP_002101029.1| GE17387 [Drosophila yakuba]
gi|194188553|gb|EDX02137.1| GE17387 [Drosophila yakuba]
Length = 1581
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 252/669 (37%), Positives = 373/669 (55%), Gaps = 97/669 (14%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP F+R++++RYP + ++ E S P EFDNLYLDMNGI+
Sbjct: 1 MGVPKFFRYISERYP-CLSELAREH--------------SIP-----EFDNLYLDMNGIV 40
Query: 61 HPCFHPDGKPAPTSYDD--VFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C HPD ++ +F+ IF+Y+D +F L++P++L +LA+DGVAPRAKMNQQR+R
Sbjct: 41 HNCSHPDDNNIHFHLEEHQIFQDIFNYVDKLFYLIKPQRLFFLAVDGVAPRAKMNQQRSR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RFR+A++A + EA+ + R E E E DSN ITPGT+FM L L+ F
Sbjct: 101 RFRSAREAEQLEAKAAQ-RGERREH----------ERFDSNCITPGTEFMVRLQEGLRAF 149
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
++ +++ P WQ VILS PGEGEHKIM YIR + P FDPNTRHCLYGLDADLI
Sbjct: 150 LKTKISTDPLWQRCSVILSGQETPGEGEHKIMDYIRYMKAQPDFDPNTRHCLYGLDADLI 209
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
+L L THE+HF +LRE + K G N V T +
Sbjct: 210 ILGLCTHELHFVVLREEV------------------------KFGRN------VKRTSVE 239
Query: 299 KKKYQFLNIWVLREYLQYELD-IPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIR 357
+ ++ L++ +LREYL+ E D + ++ +++DD+V + F VGNDF+PH+P L I
Sbjct: 240 ETRFFLLHLGLLREYLELEFDALSTAERKLDVAQLIDDWVLMGFMVGNDFIPHLPCLHIS 299
Query: 358 EGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRT-RIQQAYE 416
A+ LL Y R + +GG + + G++ L R++ F+ ++ E + F++ ++
Sbjct: 300 SNALPLLYRTYIRIYPTLGGNINENGKLNLHRLQIFMSALTEVELEQFKEHADDLKYMNA 359
Query: 417 YNEAMKLNARRESSEELLQAPVA--VADTVKLGE------------------PGYKERYY 456
EA ++ + + + + + + +++KL E YK +Y
Sbjct: 360 KTEAFDIDVAEITESQNIDSDLGALINESMKLYEDDSEEDWSDEEAVLMNEFKNYKRNFY 419
Query: 457 ADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLS 516
+KF+ +P+ ++ +++ YV L WV YYY+ V SW W+YP+HYAPF SDL+++
Sbjct: 420 RNKFK-RDPQ--GELIEELGHHYVNALQWVLDYYYRGVQSWDWYYPFHYAPFISDLRNIE 476
Query: 517 DLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGK 576
++I F +G PF PF QL+ LPAASS LP Y +LM SSP+ +FYP +F+ D+NGK
Sbjct: 477 QVQIDFQMGTPFLPFQQLLAVLPAASSKLLPVAYHDLMLLASSPLAEFYPLEFESDLNGK 536
Query: 577 RFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVH--------PQHPL 628
+ W+ VV +PFIDE+ LL E L+ E RN LY + P HP
Sbjct: 537 KHDWEAVVLIPFIDERRLLAAMLPCEAQLSLAERERNRHGPMYLYNYSAEAQGPMPAHPP 596
Query: 629 YQQI-TLYC 636
+ + LYC
Sbjct: 597 LRALPELYC 605
>gi|195345705|ref|XP_002039409.1| GM22742 [Drosophila sechellia]
gi|194134635|gb|EDW56151.1| GM22742 [Drosophila sechellia]
Length = 1585
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 258/666 (38%), Positives = 366/666 (54%), Gaps = 89/666 (13%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP F+R++++RYP + ++ E S P EFDNLYLDMNGI+
Sbjct: 1 MGVPKFFRYISERYP-CLSELAREH--------------SIP-----EFDNLYLDMNGIV 40
Query: 61 HPCFHPDGKPAPTSYDD--VFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C HPD ++ +F+ IF+Y+D +F L++P++L +LA+DGVAPRAKMNQQR+R
Sbjct: 41 HNCSHPDDNNIHFHLEEQQIFQEIFNYVDKLFYLIKPQRLFFLAVDGVAPRAKMNQQRSR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RFR+A++A + E + + R E+ E E DSN ITPGT FM L L+ F
Sbjct: 101 RFRSAREAEQLETKAAQ-RGEWREH----------ERFDSNCITPGTVFMGRLQKGLRAF 149
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
++ +++ P WQ VILS VPGEGEHKIM YIR + P FDPNTRHC+YGLDADLI
Sbjct: 150 LKTKISTDPLWQRCSVILSGQEVPGEGEHKIMDYIRYMKAQPDFDPNTRHCIYGLDADLI 209
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
+L L THE+HF +LRE + K G N V T +
Sbjct: 210 ILGLCTHELHFVVLREEV------------------------KFGRN------VKRTSVE 239
Query: 299 KKKYQFLNIWVLREYLQYELD-IPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIR 357
+ ++ L++ +LREYL+ E D + ++ +++DD+V + F VGNDF+PH+P L I
Sbjct: 240 ETRFFLLHLGLLREYLELEFDALRTVEHKLDVAQLIDDWVLMGFLVGNDFIPHLPCLHIS 299
Query: 358 EGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKR--------- 408
A+ LL Y R + +GG + + G++ L R++ F+ ++ E + F++
Sbjct: 300 SNALPLLYRTYIRIYPTLGGNINENGKLNLRRLQIFMSALTEVELEHFKEHADEIKYMNS 359
Query: 409 ------TRIQQAYEY-NEAMKLNARRESSEEL---LQAPVAVADTVKLGE-PGYKERYYA 457
T + + E N L A S L + V L E YK +Y
Sbjct: 360 KTDTFDTDVDEITESQNHDSDLGALINKSMMLYDDDSEEDCSDEAVLLKEFENYKRNFYR 419
Query: 458 DKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSD 517
+KF+ +P+ + +++ YV L WV YYY+ V SW W+YP+HY+PF SDLK++
Sbjct: 420 NKFK-RDPQ--SDLLEELGHHYVNALQWVLDYYYRGVQSWDWYYPFHYSPFISDLKNIEQ 476
Query: 518 LEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKR 577
+EI F LG PF PF QL+ LPAAS+ LP Y +LM PSSP+ FYP +F+ D+NGK+
Sbjct: 477 VEIAFHLGTPFLPFQQLLAVLPAASAKLLPVAYHDLMLLPSSPLADFYPLEFESDLNGKK 536
Query: 578 FAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVHPQHPLYQQITLYCQ 637
W+ VV +PFIDE+ LL E L+ EE RN +YV+ P Q C
Sbjct: 537 HDWEAVVLIPFIDERRLLNAMLPCEAQLSLEERERNQ--HGPMYVYKYSPEAQGTMPECP 594
Query: 638 LYHQLP 643
LP
Sbjct: 595 PLKALP 600
>gi|449531061|ref|XP_004172506.1| PREDICTED: 5'-3' exoribonuclease 4-like, partial [Cucumis sativus]
Length = 254
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 215/254 (84%), Positives = 230/254 (90%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPAFYRWLADRYP SI DVVEE+P GV P+DVSKPNPNGMEFDNLYLDMNGII
Sbjct: 1 MGVPAFYRWLADRYPRSIADVVEEEPVGGPSGVLFPIDVSKPNPNGMEFDNLYLDMNGII 60
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPCFHP+GKP P +YD VFKSIFDYIDH+F LVRPRK+LY+AIDGVAPRAKMNQQR+RRF
Sbjct: 61 HPCFHPEGKPPPATYDAVFKSIFDYIDHLFSLVRPRKVLYMAIDGVAPRAKMNQQRSRRF 120
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQ 180
RAAKDAAEAEAEEERLRKEFE G+ L KEKPETCDSNVITPGT+FM VLS ALQY+ Q
Sbjct: 121 RAAKDAAEAEAEEERLRKEFEAEGQTLLPKEKPETCDSNVITPGTEFMGVLSVALQYYAQ 180
Query: 181 ARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
+RLN PGW+FTKVILSD+NVPGEGEHKIM YIRLQRNLPGFDPNTRHCLYGLDADLIML
Sbjct: 181 SRLNHNPGWRFTKVILSDSNVPGEGEHKIMQYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
Query: 241 SLATHEIHFSILRE 254
SLATHE+HFSILRE
Sbjct: 241 SLATHEVHFSILRE 254
>gi|357624452|gb|EHJ75231.1| putative 5-3 exoribonuclease 1 [Danaus plexippus]
Length = 730
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 252/660 (38%), Positives = 353/660 (53%), Gaps = 107/660 (16%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP F+R+ ++RYP + ++V++ D FDN+YLDMNGII
Sbjct: 1 MGVPKFFRYTSERYP-CLNELVKQYQIPD-------------------FDNMYLDMNGII 40
Query: 61 HPCFHPDGKPAP--TSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C HPD + + +FK IF YI +F +++P+KL ++AIDGVAPRAKMNQQR R
Sbjct: 41 HNCSHPDDSNPHFRITEEKIFKDIFHYISILFQIIKPKKLFFMAIDGVAPRAKMNQQRGR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RFR+A++A E+L + +E G+ L +++ DSN ITPGT FMA L L+YF
Sbjct: 101 RFRSAREA-------EKLEETAKEKGEALPTEKR---FDSNCITPGTVFMARLHEQLKYF 150
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
I+ +++ P W KVILS PGEGEHKIM YIR R+ P +DP+TRHCLYGLDADLI
Sbjct: 151 IKEKISTDPLWSKVKVILSGHETPGEGEHKIMDYIRWARSQPDYDPSTRHCLYGLDADLI 210
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
ML + THE HF++LRE + ++ T
Sbjct: 211 MLGVCTHEPHFALLREEVKFGKTTQRA-----------------------------TSPE 241
Query: 299 KKKYQFLNIWVLREYLQYE-LDIP-NPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEI 356
+ + L++ +LREYL+ E + I N PFP + E I+DD+V + F VGNDF+P++P + I
Sbjct: 242 ETNFYLLHLSLLREYLEQEFISIKDNLPFPYDIENIIDDWVLMGFLVGNDFIPNLPNMHI 301
Query: 357 REGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYE 416
A+ LL Y + GY+ ++G++ L R E F+Q +A + + FQ + +E
Sbjct: 302 SNDALPLLYKTYMTVLPTLDGYINESGDLNLGRFEVFMQELAKIDKEKFQDTYADLKYFE 361
Query: 417 YNEAMKLNA--RRESSEELLQAPVAVADTVKLGEPG------------------------ 450
+ NA RR+ D +K +P
Sbjct: 362 AKTGRRPNANERRDYKPNNDDTFNVNLDDIKANKPDDELQALIDATQEMFMDDMKSDEDY 421
Query: 451 ----------------YKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDV 494
+K+ YY +K + S + D+V D YV + W YYY+
Sbjct: 422 EETSDEEANMEMEFILHKKDYYMNKLDYS--KVTDEVLSDQAECYVRAIQWNLWYYYRGC 479
Query: 495 CSWQWFYPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLM 554
SW W+YP+HYAP+ SD+KD ++ + F LGEPF+PF+QL+ LP AS LP + +LM
Sbjct: 480 PSWCWYYPHHYAPYISDIKDFGNMNMEFELGEPFKPFEQLLAVLPGASKHLLPTPFHDLM 539
Query: 555 TDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNS 614
TD SPI +YP F+ D+NGK+ W+ VV LPFIDE LL LTEEEL RNS
Sbjct: 540 TDEDSPIVHYYPVSFETDLNGKKNDWEAVVLLPFIDETNLLSAMSPCYQRLTEEELKRNS 599
>gi|393910764|gb|EJD76029.1| CBR-XRN-2 protein [Loa loa]
Length = 764
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 243/592 (41%), Positives = 330/592 (55%), Gaps = 77/592 (13%)
Query: 168 MAVLSAALQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTR 227
MA L+ AL+Y++ RLN PGW+ VILSDANVPGEGEHKIM +IR QR P DPNT
Sbjct: 1 MARLAVALRYYVHQRLNSDPGWEKVAVILSDANVPGEGEHKIMDFIRRQRASPSHDPNTV 60
Query: 228 HCLYGLDADLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPA 287
HCL G DADLIML LATHE +F+I+RE +P QQ C +CGQ GH +C G D+ +
Sbjct: 61 HCLCGADADLIMLGLATHEPNFNIIREEF-MPNQQRPCDLCGQYGHDLNDCKGLALDDDS 119
Query: 288 DWNGVDDTPIHKK-KYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGND 346
+ +P+ K+ + F+ + VLREYL+ EL IPN P + ER +DD+VF+CFFVGND
Sbjct: 120 E---CQSSPLQKETNFIFVRLPVLREYLERELHIPNSSIPFDLERAIDDWVFMCFFVGND 176
Query: 347 FLPHMPTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQ 406
FLPH+P+LEIRE AI+ L+ +Y+ M G+LTD+G V ++R + + + ED+IF+
Sbjct: 177 FLPHLPSLEIRENAIDRLVKLYKDMVYEMKGHLTDSGVVHIERAQIILNKLGEVEDEIFK 236
Query: 407 KRTRIQQAY---------------------------------------EYNEAMKLNARR 427
R +Q + AM +R
Sbjct: 237 SRQEREQQFKRKNKEKKRREKALMTPSYISSRGSFLAPQTNGPICLSGSNTRAMARTSRL 296
Query: 428 ESSE--ELLQAP-VAVADT--------------------VKLGEPGYKERYYADKFEISN 464
E+ + E L P ++V++ V+L E G+K+RYY KF++
Sbjct: 297 EALDFIETLHVPGISVSENSCHRHELKDDSSSEDEVFDEVRLWEDGWKDRYYKSKFQVDG 356
Query: 465 PEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDLEITF-F 523
+ + ++ V L YVEGLCWV YYYQ SW W+YP+HYAPFASD +S + F
Sbjct: 357 KDIV--FRRKVALAYVEGLCWVLHYYYQGCASWDWYYPFHYAPFASDFDAVSQFKPDFSA 414
Query: 524 LGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGV 583
EPF+P QLM PAAS LPE ++ LM P+SPI FYP +F ID+NGK+ AWQGV
Sbjct: 415 CTEPFKPLQQLMSVFPAASRVHLPEAWQELMISPTSPIIDFYPDNFVIDLNGKKCAWQGV 474
Query: 584 VKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVHPQHPLYQQITLYCQLYHQLP 643
LPF+DEK LL K +E L E RNS D L+V P HP Y+ + + ++
Sbjct: 475 ALLPFVDEKRLLEVLKPMEDKLDAFEKERNSRGPDRLFVGPSHPFYK----FAEELYENS 530
Query: 644 PQDRFAWEIDVNASGGMNGYIWLCER---NGLRSIIPSPVKGLPDIERNQAM 692
+D A ID + + GM G + + + G P V DI +N+A+
Sbjct: 531 KEDSIALSIDTSLTFGMAGTVGVDAKAVMKGQNYKSPFSVDEFTDIAKNKAI 582
>gi|340520299|gb|EGR50535.1| exoribonuclease [Trichoderma reesei QM6a]
Length = 1029
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 212/449 (47%), Positives = 289/449 (64%), Gaps = 16/449 (3%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MG+PA +RWL+++YP I V+EE P +GV PVD ++PNPNG E DNLYLDMNGI+
Sbjct: 1 MGIPAAFRWLSNKYPKIISPVIEETPITTDDGVTIPVDTTRPNPNGEELDNLYLDMNGIV 60
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ +PAP +++ +F Y D + +VRPRK+L +A+DGVAPRAKMNQQR+RRF
Sbjct: 61 HPCSHPEDRPAPADEEEMMLEVFRYTDRVVNMVRPRKILMIAVDGVAPRAKMNQQRSRRF 120
Query: 121 RAAKDAAEAEAEEERLRKEFE-EAGKLLSAKEK----PETCDSNVITPGTQFMAVLSAAL 175
R+A++A E E +++ L + + + G + A + + DSN ITPGT FM +L+ +L
Sbjct: 121 RSAREAKEKEEDKQALIELLKRQNGGVFEAADSEAVVKKAFDSNSITPGTPFMDILAVSL 180
Query: 176 QYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDA 235
+Y+ Q +LN P W K+I+SDA VPGEGEHKIMS+IR QR P +DPNTRH +YGLDA
Sbjct: 181 RYWCQYKLNTDPAWAKLKIIISDATVPGEGEHKIMSFIRSQRASPNYDPNTRHVIYGLDA 240
Query: 236 DLIMLSLATHEIHFSILRE-VITLPGQQEKCFVCGQVGHLAAECHG--KPGDNPADWNGV 292
DLIML LATHE HF +LRE V G+ C +CGQ GH A C G KP D
Sbjct: 241 DLIMLGLATHEPHFRVLREDVFFNEGKNRACKLCGQKGHEANNCRGTAKPNDMAEGDEQA 300
Query: 293 DDTPIHKKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMP 352
K + +L++ VLREYL EL +P+ PF + ER +DD++F+C FVGNDFLPH+P
Sbjct: 301 KAVQAPLKPFIWLHVSVLREYLAIELSVPDLPFRFDLERAIDDWIFMCCFVGNDFLPHLP 360
Query: 353 TLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQ 412
LEIRE I+ L ++R +MGGY+T G + L+R + + +A E IF++R +
Sbjct: 361 ALEIREHGIDTLTTIWRNSLPSMGGYVTKDGHIDLERAQVILDGLASQESAIFKRRKEQE 420
Query: 413 QAYE--------YNEAMKLNARRESSEEL 433
E NEA N + +S ++
Sbjct: 421 DRREASFKRRKLQNEAYSRNGQNGASSKI 449
Score = 195 bits (496), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 109/256 (42%), Positives = 154/256 (60%), Gaps = 13/256 (5%)
Query: 442 DTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFY 501
D V+L E GY++RYY KF +P++I+ + V YVEGL WV YY+Q SW+W+Y
Sbjct: 590 DNVRLWEDGYEDRYYQQKFG-KDPQDIE-FRHKVAHAYVEGLAWVLLYYFQGCPSWEWYY 647
Query: 502 PYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPI 561
PYHYAPFA+D KDL+ +EI+F G RPF+QLM LPAAS ALPE + LMT+ S I
Sbjct: 648 PYHYAPFAADFKDLAKMEISFEKGRVSRPFEQLMSVLPAASRHALPEVFHELMTEKDSEI 707
Query: 562 YKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLY 621
FYP +F+ID+NGK+ AWQGV LPFID K LL+ + L+ +++ RN++ D+L
Sbjct: 708 IDFYPEEFEIDLNGKKMAWQGVALLPFIDMKRLLKAVQSKYPLLSPDDIARNTIGKDVLI 767
Query: 622 VHPQHP-LYQQI--TLYCQLYHQLPPQDRFAWEIDVNASGGMNGYIWLCERNGLRSIIPS 678
+ H LY I T Y + QDR I+ S G+ G I E + +
Sbjct: 768 LSDNHEGLYDDILTTFYSK------KQDRSRLTINPANSNGLAGEIEKQEDSVPHGALRY 821
Query: 679 PV--KGLPDIERNQAM 692
P+ + +PD++ + ++
Sbjct: 822 PLERRSMPDLDYDHSI 837
>gi|347837816|emb|CCD52388.1| similar to 5'-3' exoribonuclease 2 [Botryotinia fuckeliana]
Length = 966
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 214/431 (49%), Positives = 288/431 (66%), Gaps = 7/431 (1%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDP-QVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGI 59
MGVPA +RWL +YP + V+EE P ++DG+ + P+D+ PNPNG E DNLYLDMNGI
Sbjct: 1 MGVPALFRWLTKQYPKIVSPVIEEQPREIDGQII--PIDIRGPNPNGEECDNLYLDMNGI 58
Query: 60 IHPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRR 119
+HPC HP+ +P P +++ IF Y D + +VRPRKLL +AIDGVAPRAKMNQQR+RR
Sbjct: 59 VHPCSHPEDRPPPKDEEEMMLEIFKYTDRVVNMVRPRKLLMIAIDGVAPRAKMNQQRSRR 118
Query: 120 FRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFI 179
FR+A++A E ++ L K + G + E + DSN ITPGT FM +L+ +L+Y+I
Sbjct: 119 FRSAQEAKEKAEDKAELLKMLKSQGSHIEETEVKKAWDSNEITPGTPFMDILALSLRYWI 178
Query: 180 QARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIM 239
+LN P W KVI+SD+ VPGEGEHKIM ++R QR+ P +PNTRH +YGLDADLIM
Sbjct: 179 AYKLNTDPAWAKMKVIISDSTVPGEGEHKIMEFVRSQRSSPDHNPNTRHVMYGLDADLIM 238
Query: 240 LSLATHEIHFSILRE-VITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
L LATHE HF ILRE V G+ C +CGQ GH A EC G +++ P
Sbjct: 239 LGLATHEPHFRILREDVFFNDGKPRTCKLCGQHGHEARECKGMYKIKDGEFDEKASAPT- 297
Query: 299 KKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIRE 358
K + +L++ VLREYL E+ +P+ PF + ER +DD+VF+CFFVGNDFLPH+P+LEIRE
Sbjct: 298 LKPFIWLHVSVLREYLAAEMYVPSQPFRFDLERALDDWVFMCFFVGNDFLPHLPSLEIRE 357
Query: 359 GAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYEYN 418
IN L+ ++R MGGYLT G V L+R + + +A ED IF+KR + ++ ++
Sbjct: 358 DGINTLIAIWRDNIPYMGGYLTKDGHVDLERAQFILDGLAKQEDAIFRKRRKNEENFQ-- 415
Query: 419 EAMKLNARRES 429
+ KLN R +
Sbjct: 416 KKRKLNNERNA 426
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 106/224 (47%), Positives = 141/224 (62%), Gaps = 7/224 (3%)
Query: 442 DTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFY 501
DTV+L E GY +RYY KF +P++I+ + +V YVEGL WV YY+Q SW W+Y
Sbjct: 562 DTVRLWEDGYADRYYEQKFN-RDPKDIE-FRHEVGRAYVEGLAWVLLYYFQGCPSWDWYY 619
Query: 502 PYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPI 561
PYHYAPFA+D +L D++I F G FRPF+QLMG LPAAS A+PE++ +LMT+ S I
Sbjct: 620 PYHYAPFAADFANLKDMKIDFQKGRIFRPFEQLMGVLPAASRQAIPEQFHHLMTNEDSEI 679
Query: 562 YKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLY 621
FYP DF +D+NGK+FAWQGV LPFID + LL K+ L E+ RN + D+L
Sbjct: 680 IDFYPEDFVVDLNGKKFAWQGVALLPFIDSERLLDAMAKVYPTLPEDVSARNGLGRDVLL 739
Query: 622 V-HPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVNASGGMNGYI 664
V H LY +IT + Y + QD +++ S G+ G I
Sbjct: 740 VSEAHHDLYDEIT--SKFYSK--KQDAPHMKLNPKVSEGLTGRI 779
>gi|24643245|ref|NP_523408.2| pacman, isoform A [Drosophila melanogaster]
gi|7293586|gb|AAF48958.1| pacman, isoform A [Drosophila melanogaster]
gi|15291661|gb|AAK93099.1| LD22664p [Drosophila melanogaster]
Length = 1612
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 244/637 (38%), Positives = 354/637 (55%), Gaps = 88/637 (13%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP F+R++++RYP +AR + EFDNLYLDMNGI+
Sbjct: 1 MGVPKFFRYISERYPCL-------------SELAREHCIP-------EFDNLYLDMNGIV 40
Query: 61 HPCFHPDGKPAPTSYDD--VFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C HPD ++ +F+ IF+Y+D +F L++P++L +L++DGVAPRAKMNQQR+R
Sbjct: 41 HNCSHPDDNNIHFHLEEEQIFQEIFNYVDKLFYLIKPQRLFFLSVDGVAPRAKMNQQRSR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RFR A++A + EA+ + R E E E DSN ITPGT+FM L L+ F
Sbjct: 101 RFRTAREAEQQEAKAAQ-RGELREH----------ERFDSNCITPGTEFMVRLQEGLRAF 149
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
++ +++ P WQ VILS PGEGEHKIM YIR + P +DPNTRHCLYGLDADLI
Sbjct: 150 LKTKISTDPLWQRCTVILSGQEAPGEGEHKIMDYIRYMKTQPDYDPNTRHCLYGLDADLI 209
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
+L L THE+HF +LRE + K G N V T +
Sbjct: 210 ILGLCTHELHFVVLREEV------------------------KFGRN------VKRTSVE 239
Query: 299 KKKYQFLNIWVLREYLQYELD-IPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIR 357
+ ++ L++ +LREYL+ E D + ++ +++DD+V + F VGNDF+PH+P L I
Sbjct: 240 ETRFFLLHLGLLREYLELEFDALRTDEHKLDIAQLIDDWVLMGFLVGNDFIPHLPCLHIS 299
Query: 358 EGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYE-DQIFQKRTRIQQAYE 416
A+ LL Y + +GG + + G++ L R++ FI ++ E D + ++
Sbjct: 300 SNALPLLYRTYIGIYPTLGGNINENGKLNLRRLQIFISALTEVELDHFKEHADDLKYMNN 359
Query: 417 YNEAMKLNARRESSEELLQAPVAV-------------------ADTVKLGE-PGYKERYY 456
+EA ++ + + L + + + V L E YK +Y
Sbjct: 360 KSEAFDMDVGEITESQNLDSDLGALINKSMLLYDDDSEEDCSDENAVLLKEFQNYKRNFY 419
Query: 457 ADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLS 516
+KF+ +P D++ +++ YV L WV YYY+ V SW W+YP+HY PF SDLK++
Sbjct: 420 RNKFK-RDPN--DELIEELCHHYVNALQWVLDYYYRGVQSWDWYYPFHYTPFISDLKNIE 476
Query: 517 DLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGK 576
+EI F +G PF PF QL+ LPAAS+ LP Y +LM P+SP+ +FYP +F+ D+NGK
Sbjct: 477 QVEIAFHMGTPFLPFQQLLAVLPAASAKLLPVAYHDLMLLPTSPLAEFYPLEFESDLNGK 536
Query: 577 RFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRN 613
+ W+ VV +PFIDE LL E L+ EE RN
Sbjct: 537 KHDWEAVVLIPFIDEGRLLAAMLPCEAQLSLEERERN 573
>gi|281361106|ref|NP_001162796.1| pacman, isoform B [Drosophila melanogaster]
gi|272506169|gb|ACZ95330.1| pacman, isoform B [Drosophila melanogaster]
Length = 1613
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 244/637 (38%), Positives = 354/637 (55%), Gaps = 88/637 (13%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP F+R++++RYP +AR + EFDNLYLDMNGI+
Sbjct: 1 MGVPKFFRYISERYPCL-------------SELAREHCIP-------EFDNLYLDMNGIV 40
Query: 61 HPCFHPDGKPAPTSYDD--VFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C HPD ++ +F+ IF+Y+D +F L++P++L +L++DGVAPRAKMNQQR+R
Sbjct: 41 HNCSHPDDNNIHFHLEEEQIFQEIFNYVDKLFYLIKPQRLFFLSVDGVAPRAKMNQQRSR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RFR A++A + EA+ + R E E E DSN ITPGT+FM L L+ F
Sbjct: 101 RFRTAREAEQQEAKAAQ-RGELREH----------ERFDSNCITPGTEFMVRLQEGLRAF 149
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
++ +++ P WQ VILS PGEGEHKIM YIR + P +DPNTRHCLYGLDADLI
Sbjct: 150 LKTKISTDPLWQRCTVILSGQEAPGEGEHKIMDYIRYMKTQPDYDPNTRHCLYGLDADLI 209
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
+L L THE+HF +LRE + K G N V T +
Sbjct: 210 ILGLCTHELHFVVLREEV------------------------KFGRN------VKRTSVE 239
Query: 299 KKKYQFLNIWVLREYLQYELD-IPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIR 357
+ ++ L++ +LREYL+ E D + ++ +++DD+V + F VGNDF+PH+P L I
Sbjct: 240 ETRFFLLHLGLLREYLELEFDALRTDEHKLDIAQLIDDWVLMGFLVGNDFIPHLPCLHIS 299
Query: 358 EGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYE-DQIFQKRTRIQQAYE 416
A+ LL Y + +GG + + G++ L R++ FI ++ E D + ++
Sbjct: 300 SNALPLLYRTYIGIYPTLGGNINENGKLNLRRLQIFISALTEVELDHFKEHADDLKYMNN 359
Query: 417 YNEAMKLNARRESSEELLQAPVAV-------------------ADTVKLGE-PGYKERYY 456
+EA ++ + + L + + + V L E YK +Y
Sbjct: 360 KSEAFDMDVGEITESQNLDSDLGALINKSMLLYDDDSEEDCSDENAVLLKEFQNYKRNFY 419
Query: 457 ADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLS 516
+KF+ +P D++ +++ YV L WV YYY+ V SW W+YP+HY PF SDLK++
Sbjct: 420 RNKFK-RDPN--DELIEELCHHYVNALQWVLDYYYRGVQSWDWYYPFHYTPFISDLKNIE 476
Query: 517 DLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGK 576
+EI F +G PF PF QL+ LPAAS+ LP Y +LM P+SP+ +FYP +F+ D+NGK
Sbjct: 477 QVEIAFHMGTPFLPFQQLLAVLPAASAKLLPVAYHDLMLLPTSPLAEFYPLEFESDLNGK 536
Query: 577 RFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRN 613
+ W+ VV +PFIDE LL E L+ EE RN
Sbjct: 537 KHDWEAVVLIPFIDEGRLLAAMLPCEAQLSLEERERN 573
>gi|308160579|gb|EFO63060.1| 5'-3' exoribonuclease 2 [Giardia lamblia P15]
Length = 900
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 264/714 (36%), Positives = 380/714 (53%), Gaps = 107/714 (14%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDP-----QVDGEGVARPVDVSKPNPNGMEFDNLYLD 55
MGVP+F+RW+ RY I +V+E P +DG + P G DNLY D
Sbjct: 1 MGVPSFFRWIVQRYSSVIDNVIEALPDTYEANIDGGAL----------PLGFAIDNLYFD 50
Query: 56 MNGIIHPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQ 115
NG+IHPCFHP+G+P P + +VF+ IF ID + + RPR+LLYLA+DG APRAK+NQQ
Sbjct: 51 TNGLIHPCFHPEGRPQPETEAEVFEEIFQVIDRVVSVCRPRRLLYLAVDGPAPRAKLNQQ 110
Query: 116 RTRRFRAAKDAAEAEAEEER-----------LRK-EFEEAGKLLSAKEKPETCDSNVITP 163
R+RRF AA + + +ER L+K FEE + + E DSN ITP
Sbjct: 111 RSRRFMAAYERQIKQRAQERRHMNLGDTEPSLKKLGFEENKAMDTFTEN--ALDSNAITP 168
Query: 164 GTQFMAVLSAALQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFD 223
GT FM+ LS AL+Y++ R W+ V+ +DA PGEGEHKIMS++R+QR+ PG+D
Sbjct: 169 GTPFMSRLSVALKYYVANRQANSKLWRHLTVLYADAWSPGEGEHKIMSFVRIQRSQPGYD 228
Query: 224 PNTRHCLYGLDADLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPG 283
P T HC+YGLDADLIML+L THE +F ILR+V+ + C C GHL + G
Sbjct: 229 PCTVHCIYGLDADLIMLALGTHEPNFLILRDVVDTDNLKRTCTRC---GHLRVSSEYRTG 285
Query: 284 ------DNPADWNGVDDTPIH----------KKKYQFLNIWVLREYLQYELDIPNPPFPI 327
D G+ D P + + +QFL++ LREYLQ E D + +
Sbjct: 286 TVDPFTTRHEDQGGI-DCPFYPGSSLRPVAFRSPFQFLHVSRLREYLQREFDAAD----V 340
Query: 328 NFERIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHVYRR-EFTAMGGYLTDAGEVL 386
FER +DDFVFL F VGNDFLPH+ L+IRE A+ +++ Y++ + + G+LT +V
Sbjct: 341 VFERSIDDFVFLTFLVGNDFLPHIQCLDIREDAVIRMIYFYKQLKRSKKIGFLTTGSDVN 400
Query: 387 LDRVEKFIQSVAVYEDQIFQKRTRIQQAYEYNEAMKL-NARRESSEE------------- 432
++ ++ +A E +IF+ R + +++ + N+R E+ E
Sbjct: 401 MNDFHILLKELAEQESRIFKARASGKLNTRHSQVSETPNSRDETPGERAIREYFQFFKRD 460
Query: 433 -------------------LLQAPVAVADTV---KLGEPGYKERYY-----ADKFEISNP 465
L VAV + +L +PGY +RYY D F+ ++
Sbjct: 461 DKRMIKDAMDDYCTLHDKPLPPTVVAVKHILIKYELEKPGYAQRYYLGIGLMDDFQETDQ 520
Query: 466 E------EIDKVKKDVVLKYVEGLCWVCRYYY-QDVCSWQWFYPYHYAPFASDLKDLSDL 518
E E+ K + + Y++GL WV RYY+ V W W+YPYH++P DL S
Sbjct: 521 ESDIFKTELRKRIQTMCYHYIDGLIWVFRYYFLPKVEDWGWYYPYHHSPLLVDLASASQT 580
Query: 519 EITFF-----LGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDM 573
+ PF P++QL+ +P AS++ LP R LMTDP+S + KFYP + D+
Sbjct: 581 YTRTWKQHTMSNRPFNPYEQLLAVMPPASATLLPPVMRCLMTDPASILNKFYPSLIKCDL 640
Query: 574 NGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVHPQHP 627
+ K W+GV+ LPFI+ L+ +K LT E RN + ++ +H HP
Sbjct: 641 SEKTALWKGVLLLPFINSSELVSAAQKSYGQLTPLEQQRNRLSDPVVLIHKDHP 694
>gi|398010273|ref|XP_003858334.1| 5'-3' exonuclease, putative [Leishmania donovani]
gi|322496541|emb|CBZ31610.1| 5'-3' exonuclease, putative [Leishmania donovani]
Length = 1499
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 242/630 (38%), Positives = 356/630 (56%), Gaps = 76/630 (12%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP F+RW A+R+P I + P VD NLYLD+NGII
Sbjct: 1 MGVPKFFRWAAERFPSIITPFKDSPPPVD---------------------NLYLDINGII 39
Query: 61 HPCFHPD----GKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQR 116
H C HP+ + +PT ++ +++F Y++ +F ++PRK LA+DGVAPRAKMNQQR
Sbjct: 40 HNCTHPNDVDATRRSPTE-KEMIQAMFVYLEKLFNAIQPRKYFLLAVDGVAPRAKMNQQR 98
Query: 117 TRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQ 176
RR+RA + A E + +E E+ + DSN ITPGT FM +S Q
Sbjct: 99 QRRYRAGYEMMIAREEALAMGEE---------VPEEKDVFDSNCITPGTPFMVRVSKEFQ 149
Query: 177 YFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDAD 236
YFI +L+ P WQ ++I S + PGEGEHKI+ +IR ++ P +DPN HC+YGLDAD
Sbjct: 150 YFITMKLSTDPAWQGCQIIFSGHDCPGEGEHKIVDFIRRRKMQPNYDPNETHCMYGLDAD 209
Query: 237 LIMLSLATHEIHFSILREVITL-PGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDT 295
L+ML+LATHE HF +LREV+T PG +++ + E G V D
Sbjct: 210 LVMLALATHEPHFVLLREVVTFGPGSRKE-----RERQEEDEAKGL----------VKDK 254
Query: 296 PIHKK-KYQFLNIWVLREYLQYE----LDIPNPPFPINFERIVDDFVFLCFFVGNDFLPH 350
HK ++ L+I V R+YLQ E L I+FER++DDFVF+CFF+GNDFLP
Sbjct: 255 AYHKADEFVLLHINVFRDYLQLEVKGYLAKAKSSVSIDFERVIDDFVFMCFFIGNDFLPT 314
Query: 351 MPTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTR 410
+PT+ I +G+I L+H+Y + YLT GE+ E ++ V E + ++R +
Sbjct: 315 LPTIGINDGSIPALLHIYVDNMLSKSKYLTHKGEIDWRNAEVWLNEVGKLEFETLRRRQQ 374
Query: 411 IQQAYEYNEAMKLNARRESSEELLQAPVAVADTVKLGEPGYKERYYADKFEI-----SNP 465
+ ++ N ARR+ + E+ A V ++ +K+RYY +K +N
Sbjct: 375 EEAEFQKNR-----ARRDPTHEVDTASVIPITSIL----EFKQRYYGEKHGFAGGWDANS 425
Query: 466 EEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDL--EITFF 523
E++ ++++ YVEGL WV YYYQ V SW+WF+P++YAP ASD+ +L + ++F
Sbjct: 426 EDMQRLRE----HYVEGLMWVMHYYYQGVPSWKWFFPHYYAPMASDMVNLPAIAARVSFE 481
Query: 524 LGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGV 583
LG+PF+P QL+ LP S ++P+ Y L+ PSSP+ K+ P ID G R W+G+
Sbjct: 482 LGKPFQPHQQLLAVLPPMSYLSMPKAYWPLLRSPSSPLAKYLPEHIVIDREGARAPWEGI 541
Query: 584 VKLPFIDEKLLLRQTKKLEVFLTEEELFRN 613
V +PFIDE+ LL + ++ ++ E+ N
Sbjct: 542 VLIPFIDERTLLAAYESVQKNVSPEDAANN 571
>gi|390353506|ref|XP_003728123.1| PREDICTED: 5'-3' exoribonuclease 1-like [Strongylocentrotus
purpuratus]
Length = 1915
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 254/655 (38%), Positives = 358/655 (54%), Gaps = 85/655 (12%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP FYRW ++RYP + +VV+E+ Q+ EFDNLYLDMNGII
Sbjct: 1 MGVPKFYRWQSERYPC-LSEVVKEN-QIP------------------EFDNLYLDMNGII 40
Query: 61 HPCFHPDGKPAP--TSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C HP+ + +D+FKSIF YI+ +F +++PRK+ ++A+DGVAPRAKMNQQR R
Sbjct: 41 HTCTHPNDDDVHFRMTEEDMFKSIFHYIEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RFR+A +A E E E R G+ L +++ DSN ITPGT FM L L+YF
Sbjct: 101 RFRSALEAEEREKEAVR-------KGETLPDEKR---FDSNCITPGTDFMVRLQRQLKYF 150
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
+ ++ + WQ ++ LS PGEGEHKIM +IR ++ DPNTRHCLYGLDADLI
Sbjct: 151 VNTKITEDSKWQGIRIFLSGHETPGEGEHKIMDFIRAEKAQKEHDPNTRHCLYGLDADLI 210
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
ML L +HE HFS+LRE + GK P T +
Sbjct: 211 MLGLISHEPHFSLLREEVRF---------------------GKQAKRP--------TTVE 241
Query: 299 KKKYQFLNIWVLREYLQYELDIPNPPFP-INFERIVDDFVFLCFFVGNDFLPHMPTLEIR 357
+ + L++ + REYL E + E I+DD+V L F VGNDF+P++P L I
Sbjct: 242 ETTFHLLHLSLFREYLALEFSAVKDQIDWFDAECIIDDWVLLGFLVGNDFVPNLPDLHIS 301
Query: 358 EGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYEY 417
A+ LL Y + + GYL + G + L R EKF++ ++ ++ + F ++ E
Sbjct: 302 HSALPLLYKTYIKVLPTLDGYLNEGGHLNLPRFEKFMKELSKFDYENFDSQSIDLSFLEG 361
Query: 418 NEAMKLNARRESSEELLQAPVAVADTVKLGEPGYKERYY---ADKFEISNPEE----IDK 470
+ NA + E+ +A + + ++ PG+ + D E+S+ EE DK
Sbjct: 362 KQ--DENAWKSKKVEMKKA---IREKLQAEIPGFMNMEWIENKDIDELSSDEEGEDYFDK 416
Query: 471 VKKD---VVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDLEITFFLGEP 527
+K +V Y+ + W+ YYY + SW W+YP+HY+P+ SDLKD SDL +T G+P
Sbjct: 417 FRKQTAQIVSDYIYAIQWILHYYYNGIQSWSWYYPHHYSPYMSDLKDFSDLVVTLDKGQP 476
Query: 528 FRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLP 587
F PF+QL+ LP AS LP+ Y LM + +SPI ++YP +F+ D+NGK AW+ VV +P
Sbjct: 477 FLPFEQLLAVLPPASRDHLPQAYHPLMLNENSPILEYYPLEFEQDLNGKLQAWEAVVLIP 536
Query: 588 FIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVHPQHPLYQQITLYCQLYHQL 642
FIDE L K E LTE E RN H +H LY YH++
Sbjct: 537 FIDENRLWAGMKMYEDKLTEAEKKRN--------CHSEHLLYTTDLANPHTYHEV 583
>gi|4914494|emb|CAB43711.1| pacman protein [Drosophila melanogaster]
Length = 1613
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 244/637 (38%), Positives = 354/637 (55%), Gaps = 88/637 (13%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP F+R++++RYP +AR + EFDNLYLDMNGI+
Sbjct: 1 MGVPKFFRYISERYPCL-------------SELAREHCIP-------EFDNLYLDMNGIV 40
Query: 61 HPCFHPDGKPAPTSYDD--VFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C HPD ++ +F+ IF+Y+D +F L++P++L +L++DGVAPRAKMNQQR+R
Sbjct: 41 HNCSHPDDNNIHFHLEEEQIFQEIFNYVDKLFYLIKPQRLFFLSVDGVAPRAKMNQQRSR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RFR A++A + EA+ + R E E E DSN ITPGT+FM L L+ F
Sbjct: 101 RFRTAREAEQQEAKAAQ-RGELREH----------ERFDSNCITPGTEFMVRLQEGLRAF 149
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
++ +++ P WQ VILS PGEGEHKIM YIR + P +DPNTRHCLYGLDADLI
Sbjct: 150 LKTKISTDPLWQRCTVILSGQEAPGEGEHKIMDYIRYMKTQPDYDPNTRHCLYGLDADLI 209
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
+L L THE+HF +LRE + K G N V T +
Sbjct: 210 ILGLCTHELHFVVLREEV------------------------KFGRN------VKRTSVE 239
Query: 299 KKKYQFLNIWVLREYLQYELD-IPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIR 357
+ ++ L++ +LREYL+ E D + ++ +++DD+V + F VGNDF+PH+P L I
Sbjct: 240 ETRFFLLHLGLLREYLELEFDALRTDEHKLDIAQLIDDWVLMGFLVGNDFIPHLPCLHIS 299
Query: 358 EGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYE-DQIFQKRTRIQQAYE 416
A+ LL Y + +GG + + G++ L R++ FI ++ E D + ++
Sbjct: 300 SNALPLLYRTYIGIYPTLGGNINENGKLNLRRLQIFISALTEVELDHFKEHADDLKYMNN 359
Query: 417 YNEAMKLNARRESSEELLQAPVAV-------------------ADTVKLGE-PGYKERYY 456
+EA ++ + + L + + + V L E YK +Y
Sbjct: 360 KSEAFDMDVGEITESQNLDSDLGALINKSMLLYDDDSEEDCSDENAVLLKEFQNYKRNFY 419
Query: 457 ADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLS 516
+KF+ +P D++ +++ YV L WV YYY+ V SW W+YP+HY PF SDLK++
Sbjct: 420 RNKFK-RDPN--DELIEELCHHYVNALQWVLDYYYRGVQSWDWYYPFHYTPFISDLKNIE 476
Query: 517 DLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGK 576
+EI F +G PF PF QL+ LPAAS+ LP Y +LM P+SP+ +FYP +F+ D+NGK
Sbjct: 477 QVEIAFHMGTPFLPFQQLLAVLPAASAKLLPVAYHDLMLLPTSPLAEFYPLEFESDLNGK 536
Query: 577 RFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRN 613
+ W+ VV +PFIDE LL E L+ EE RN
Sbjct: 537 KHDWEAVVLIPFIDEGRLLAAMLPCEAQLSLEERERN 573
>gi|384490873|gb|EIE82069.1| hypothetical protein RO3G_06774 [Rhizopus delemar RA 99-880]
Length = 967
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 213/409 (52%), Positives = 279/409 (68%), Gaps = 5/409 (1%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPAF+RWL+D++P + +EE P+ G+ PVD +KPNPN EFDNLYLDMNGII
Sbjct: 1 MGVPAFFRWLSDKFPKVVTPAIEERPKT-VNGMTIPVDTTKPNPNNEEFDNLYLDMNGII 59
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+GKPAP + D++ IF Y+D I +VRPRK+LY+AIDGVAPRAKMNQQR+RRF
Sbjct: 60 HPCCHPEGKPAPATEDEMMIEIFTYLDRIVDIVRPRKVLYMAIDGVAPRAKMNQQRSRRF 119
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQ 180
RAA+ A ER+ E G+ ++K DSN ITPGT FMA L+ L+Y I
Sbjct: 120 RAAQLAQIERDASERVAYELAAIGQEHQMEKKESHFDSNCITPGTPFMAHLATCLRYHIA 179
Query: 181 ARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
++ N P W+ KVILSDA VPGEGEHK+M +IR++R+ DPNT H +YGLDADLIML
Sbjct: 180 SKQNTDPLWKKLKVILSDATVPGEGEHKVMEFIRVERSRSEHDPNTSHVMYGLDADLIML 239
Query: 241 SLATHEIHFSILRE-VITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIHK 299
+L THE HF I+RE V ++ C C + GH A +C D+ A+ + D++ +
Sbjct: 240 ALGTHEPHFKIIREDVFADNKRKSNCTNCNRRGHTADKC-PLSEDSAAEPSKDDNSNL-- 296
Query: 300 KKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREG 359
K Y FL++ +LREYL+Y L P P N ER +DD+VF+CFFVGNDFLPH+P+LEIREG
Sbjct: 297 KPYVFLHVNILREYLEYALKFNIPGIPWNLERAIDDWVFMCFFVGNDFLPHLPSLEIREG 356
Query: 360 AINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKR 408
AI+ L ++++ MGGY+T G+V L RV+ + + ED IF+ R
Sbjct: 357 AISTLSLLWKKCMPMMGGYMTKDGDVDLKRVQVLVSELGHMEDTIFRDR 405
Score = 155 bits (393), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 94/189 (49%), Positives = 123/189 (65%), Gaps = 2/189 (1%)
Query: 442 DTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFY 501
D V+L E G+KERYY KF + N EE D++ +++V Y EGL WV +YYY SW W+Y
Sbjct: 557 DEVRLWESGWKERYYGTKFRL-NLEEKDEI-REIVKSYCEGLIWVFKYYYLGCVSWSWYY 614
Query: 502 PYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPI 561
PY+YAP ASD ++ +I F P RPF+QLMG LPAAS S +P + LMTD +SPI
Sbjct: 615 PYYYAPMASDFINIDSFDIKFEKSAPLRPFEQLMGVLPAASRSHIPAPFHPLMTDENSPI 674
Query: 562 YKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLY 621
+YP F++DM+GK++ WQGVVKLPFI+ + LL + L EEE+ RNSV +LY
Sbjct: 675 IDYYPTHFEVDMDGKKWEWQGVVKLPFINSERLLAAMDTVYDQLNEEEVQRNSVGPAVLY 734
Query: 622 VHPQHPLYQ 630
V H Y
Sbjct: 735 VSESHKAYN 743
>gi|346979187|gb|EGY22639.1| 5'-3' exoribonuclease [Verticillium dahliae VdLs.17]
Length = 1013
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 206/424 (48%), Positives = 280/424 (66%), Gaps = 7/424 (1%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MG+PA +RWL+++YP I VVE+ P +G PVD + PNPNG E DNLYLDMNGI+
Sbjct: 1 MGIPAAFRWLSNKYPKIISPVVEDQPLQMEDGTTIPVDTTGPNPNGEELDNLYLDMNGIV 60
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ +PAP +++ +F Y D + +VRPRKLL +A+DGVAPRAKMNQQR+RRF
Sbjct: 61 HPCSHPEDRPAPKDEEEMMLEVFRYTDRVVNMVRPRKLLMIAVDGVAPRAKMNQQRSRRF 120
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETC-----DSNVITPGTQFMAVLSAAL 175
R+A++A E E +++ L K ++ + E E+ DSN ITPGT FM L+ +L
Sbjct: 121 RSAQEAQEKEVDKQELLKLLKQQNGGILPPETLESMNKKAFDSNSITPGTPFMDTLATSL 180
Query: 176 QYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDA 235
+Y+ +LN P W K+I+SDA VPGEGEHKIM+Y+R QR P +DPNTRH +YGLDA
Sbjct: 181 RYWCAYKLNTDPAWARLKIIISDATVPGEGEHKIMNYVRSQRGSPDYDPNTRHVIYGLDA 240
Query: 236 DLIMLSLATHEIHFSILRE-VITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDD 294
DLIML LATHE HF +LRE V + + C +CGQ GH A C G+ D +++ D
Sbjct: 241 DLIMLGLATHEPHFRVLREDVFAQDAKAKMCKICGQKGHDARVCKGEAKDKDGEYD-EQD 299
Query: 295 TPIHKKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTL 354
+ K + +L++ + REYL ELD+P+ PF + ER +DD+VF+C FVGNDFLPH+P L
Sbjct: 300 KAVDLKPFIWLHVSIFREYLAIELDVPDLPFRFDLERAIDDWVFMCCFVGNDFLPHLPAL 359
Query: 355 EIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQA 414
EIRE I+ L +++ MGGY+T G + L RV+ + +A ED IF++R +
Sbjct: 360 EIRENGIDALTTIWKENLPRMGGYVTKDGHIDLKRVQLIMDGLAKQEDAIFRRRKEQEDR 419
Query: 415 YEYN 418
E N
Sbjct: 420 REAN 423
Score = 190 bits (482), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 102/230 (44%), Positives = 133/230 (57%), Gaps = 7/230 (3%)
Query: 436 APVAVADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVC 495
A A D V++ E GY +RYY KF + + + K V YVEGLCWV YYYQ
Sbjct: 565 AEEAAIDHVRMWEEGYADRYYEQKFHVDRNDVAFRHK--VAQAYVEGLCWVLLYYYQGCP 622
Query: 496 SWQWFYPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMT 555
SW W+YPYHYAPFA+D DL +EI+F G +PF+QLM +PAAS ALPE + +LM
Sbjct: 623 SWDWYYPYHYAPFAADFADLDKIEISFEKGRISKPFEQLMSVMPAASRRALPEVFHDLML 682
Query: 556 DPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSV 615
+ S + FYP +F+ID+NGK+FAWQGV LPFID LL +K L+ E+ RN +
Sbjct: 683 NEDSEVIDFYPQEFEIDLNGKKFAWQGVALLPFIDMPRLLAAVEKKYPLLSPEDAARNGI 742
Query: 616 MLD-LLYVHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVNASGGMNGYI 664
D LL H LY+ IT + Q P + ++ S GM G +
Sbjct: 743 GRDVLLLSDAHHELYEDITSHFYSKKQGAP----TFGLNPRTSDGMTGQV 788
>gi|154331043|ref|XP_001561961.1| putative 5'-3' exonuclease [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134059283|emb|CAM36982.1| putative 5'-3' exonuclease [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|449310628|gb|AGE92541.1| 5'-3' exonuclease [Leishmania braziliensis]
gi|449310652|gb|AGE92553.1| 5'-3' exonuclease [Leishmania braziliensis]
Length = 1513
Score = 424 bits (1089), Expect = e-115, Method: Compositional matrix adjust.
Identities = 242/631 (38%), Positives = 357/631 (56%), Gaps = 78/631 (12%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP F+RW A+R+P I + P VD NLYLD+NGII
Sbjct: 1 MGVPKFFRWAAERFPSIITPFKDSPPPVD---------------------NLYLDINGII 39
Query: 61 HPCFHPD----GKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQR 116
H C HP+ + +PT ++ +++F Y++ +F ++PRK LA+DGVAPRAKMNQQR
Sbjct: 40 HNCTHPNDVDATRRSPTE-KEMIQAMFIYLEKLFNAIQPRKYFLLAVDGVAPRAKMNQQR 98
Query: 117 TRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQ 176
RR+RA + A E + +E E + DSN ITPGT FM +S Q
Sbjct: 99 QRRYRAGYEMMVAREEALAMGEEVPEEKDMF---------DSNCITPGTPFMVRVSTEFQ 149
Query: 177 YFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDAD 236
YFI +L+ P WQ ++I S + PGEGEHKI+ +IR ++ P +DPN HC+YGLDAD
Sbjct: 150 YFITMKLSTDPAWQRCEIIFSGHDCPGEGEHKIVDFIRRRKMQPNYDPNETHCMYGLDAD 209
Query: 237 LIMLSLATHEIHFSILREVITL-PGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDT 295
L+ML+LATHE HF +LREV+T PG +++ + E G V D
Sbjct: 210 LVMLALATHEPHFVLLREVVTFGPGSRKE-----RERQEEDEAKGL----------VKDK 254
Query: 296 PIHKK-KYQFLNIWVLREYLQYE----LDIPNPPFPINFERIVDDFVFLCFFVGNDFLPH 350
HK ++ L+I V R+YLQ E L I+FERI+DDFVF+CFF+GNDFLP
Sbjct: 255 AYHKADEFVLLHISVFRDYLQLEVKDYLAKSKSSTKIDFERIIDDFVFMCFFIGNDFLPT 314
Query: 351 MPTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTR 410
+PT+ I +G+I +L+ +Y + YLT GE+ E ++ V E + ++R +
Sbjct: 315 LPTIGINDGSIPVLLRLYVDNLLSKNRYLTHKGEIDWRNAEVWLNEVGKLEFETLRRRQQ 374
Query: 411 IQQAYEYNEAMKLNARRESSEEL-LQAPVAVADTVKLGEPGYKERYYADKFEI-----SN 464
+ Y+ N ARR+ + E+ + + + ++ +K+RYY +K +N
Sbjct: 375 EEAEYQKN-----RARRDPTHEVDTTSAMPITSILE-----FKQRYYGEKHGFVGGWDAN 424
Query: 465 PEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDLE--ITF 522
E++ ++++ YVEGL WV YYYQ V SW+WF+P++YAP ASDL +L + +TF
Sbjct: 425 SEDMRRLRE----HYVEGLMWVMHYYYQGVPSWKWFFPHYYAPMASDLVNLPGISARVTF 480
Query: 523 FLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQG 582
+G+PF+P QL+ LP S ++P+ Y +L+ PSSP+ K+ P ID G R W+G
Sbjct: 481 EVGKPFQPHQQLLAVLPPMSYLSMPKAYWSLLRSPSSPLAKYLPEHIVIDREGARAPWEG 540
Query: 583 VVKLPFIDEKLLLRQTKKLEVFLTEEELFRN 613
+V +PFIDE+ LL + ++ ++ E+ N
Sbjct: 541 IVLIPFIDERTLLAAYESVQQNVSPEDAANN 571
>gi|412993025|emb|CCO16558.1| predicted protein [Bathycoccus prasinos]
Length = 1062
Score = 424 bits (1089), Expect = e-115, Method: Compositional matrix adjust.
Identities = 232/415 (55%), Positives = 294/415 (70%), Gaps = 21/415 (5%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPAFYRWL+ +YP I DVVE D VD G VD SK NPNG EFDNLYLDMNGII
Sbjct: 1 MGVPAFYRWLSVKYPKIIADVVE-DEVVDINGNKVFVDSSKSNPNGQEFDNLYLDMNGII 59
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPCFHP+ +P PT+ ++VF +IF+YI+ +FL++RPRK+LY+AIDGVAPRAKMNQQR+RRF
Sbjct: 60 HPCFHPEDRPPPTTEEEVFLNIFEYIERLFLMIRPRKVLYMAIDGVAPRAKMNQQRSRRF 119
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQ 180
RAA++A E + EEE+LR++ G + K + DSNVITPGT FM L+ AL+++++
Sbjct: 120 RAAQEAEEKKIEEEKLREKLRRDGIEVPPKIESGVFDSNVITPGTPFMGRLAEALKFYVR 179
Query: 181 ARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQR---NLPGFDPNTRHCLYGLDADL 237
+ N GW+ KVI+SDA+VPGEGEHK M YIR QR N G+DPNTRH +YGLDADL
Sbjct: 180 KKQNTDKGWKNIKVIVSDASVPGEGEHKAMHYIRQQRACANGGGYDPNTRHVVYGLDADL 239
Query: 238 IMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPI 297
IML+LATHE HF ILREV+ Q+K Q G G D N I
Sbjct: 240 IMLALATHEPHFHILREVVF----QQKPNESAQNG----------GAGAIDKN-AKQIAI 284
Query: 298 HKKKYQFLNIWVLREYLQYELDIPNPP--FPINFERIVDDFVFLCFFVGNDFLPHMPTLE 355
+K +Q L++ +LREYL +L P F I+ ER+ DDFVF+CFFVGNDFLPH PTLE
Sbjct: 285 ARKPFQLLSVTILREYLALDLSPHVLPQTFTIDRERLFDDFVFMCFFVGNDFLPHSPTLE 344
Query: 356 IREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTR 410
IREGAI+LLM +Y++E +GG+L + G L RV +F+++VA +E+QIFQKR +
Sbjct: 345 IREGAIDLLMTIYKQELGNLGGHLVEDGTPNLRRVGQFVRAVAQFEEQIFQKRAK 399
Score = 218 bits (555), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 106/227 (46%), Positives = 144/227 (63%), Gaps = 3/227 (1%)
Query: 441 ADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWF 500
AD ++LGE G+KERYY K + KV + +V +++ GL WVC+YYY+ CSW WF
Sbjct: 651 ADNIRLGEIGWKERYYDAKMGSHDLNSRRKVVRGMVEEFIRGLLWVCKYYYEGCCSWGWF 710
Query: 501 YPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSP 560
YPYHYAPFA+D+ DL + F LG+PF+PFDQLMG LPAAS+ ALP + LMTD SP
Sbjct: 711 YPYHYAPFATDMVDLELISTEFELGKPFKPFDQLMGVLPAASAHALPPAFYPLMTDEDSP 770
Query: 561 IYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLL 620
I FYP F +DMNGKRFAWQ V LP+ID LL +T+ L+ LT EE RN++ ++LL
Sbjct: 771 IIDFYPKHFDLDMNGKRFAWQAVALLPWIDADRLLTETRNLDCTLTPEEANRNTINIELL 830
Query: 621 YVHPQHPLYQQITLYCQLYHQLPPQD---RFAWEIDVNASGGMNGYI 664
Y H Q + + + + ++ +D + A +I + G G +
Sbjct: 831 YAHEQLSISKCMLKIANVASKIDDEDIREKCALKIPAADADGACGEV 877
>gi|157119783|ref|XP_001659504.1| 5'-3' exoribonuclease, putative [Aedes aegypti]
gi|108875157|gb|EAT39382.1| AAEL008814-PA [Aedes aegypti]
Length = 1668
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 246/649 (37%), Positives = 362/649 (55%), Gaps = 98/649 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP F+R++++RYP + +++ E+ D FDNLYLDMNGII
Sbjct: 1 MGVPKFFRYISERYPC-LSELIRENQVPD-------------------FDNLYLDMNGII 40
Query: 61 HPCFHPDGKPA--PTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C HP+ + + +F IF Y++ +F ++RP+KL ++A+DGVAPRAKMNQQR R
Sbjct: 41 HNCSHPNDSDVFFRITEEKIFSDIFHYLEFLFRMIRPQKLFFIAVDGVAPRAKMNQQRGR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RFR+A++A E E ++ G++L + + DSN ITPGT FM L AL++F
Sbjct: 101 RFRSAREAQEQAEEAQK-------KGEVLPTEAR---FDSNCITPGTSFMVRLQKALEHF 150
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
I+ +++ P W+ KVILS PGEGEHKIM YIR ++ P FD NTRHCLYGLDADL+
Sbjct: 151 IKVKVSTNPLWKHCKVILSGHETPGEGEHKIMEYIRYAKSQPDFDSNTRHCLYGLDADLV 210
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
ML L THE HFS+LRE + G N + V++T
Sbjct: 211 MLGLCTHEKHFSLLREEVKF------------------------GKNDKKSSIVEET--- 243
Query: 299 KKKYQFLNIWVLREYLQYELDIPNPP--FPINFERIVDDFVFLCFFVGNDFLPHMPTLEI 356
++ L++ ++REYL+ E F N +++DD+V + + VGNDF+PH+P L I
Sbjct: 244 --RFYLLHLTLMREYLELEFAPVRDKLKFEFNIYKLIDDWVLMGYMVGNDFIPHLPHLHI 301
Query: 357 REGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIF-QKRTRIQ--- 412
E A+ L Y + GY+ + G + + R+E + +A ++ IF + T +Q
Sbjct: 302 NENALPTLFQAYMDILPTLDGYINEGGILNMPRLEVLMNRLARFDRDIFLENYTDLQYFK 361
Query: 413 --QAYEYNEAMK---------------LNARRESSEELL-------QAPVAVADTVKLGE 448
+A+ EA L+A ++SE++ + P + + + E
Sbjct: 362 SKRAHNDTEAFDVIIDDIKAEAEMDCDLSALIKASEDMFSDDEDDAEPPGDIENDPEFFE 421
Query: 449 ---PGYKERYYADKFEISNPEEIDKVKKDVVLK-YVEGLCWVCRYYYQDVCSWQWFYPYH 504
YK YY K ++ ++ +D + Y+ L W YYY+ V SW W+YP+H
Sbjct: 422 KEFTAYKRNYYITKLGY---QDYNQATRDEQTECYIRALQWTLLYYYRGVPSWAWYYPHH 478
Query: 505 YAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKF 564
YAPF SDL+++S L++ F G+PF PF QL+ LP AS LP Y LMTDP+SP+ +
Sbjct: 479 YAPFISDLQNISSLKLNFEPGKPFLPFQQLLSVLPTASKDHLPSAYHKLMTDPNSPVVDY 538
Query: 565 YPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRN 613
YP +F+ D+NGK+ AW+ VV +PFIDEK LL+ + + FLT+EE RN
Sbjct: 539 YPENFETDLNGKQQAWEAVVLIPFIDEKRLLKAMEPCDAFLTDEEKQRN 587
>gi|195457130|ref|XP_002075439.1| GK17975 [Drosophila willistoni]
gi|194171524|gb|EDW86425.1| GK17975 [Drosophila willistoni]
Length = 1638
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 247/656 (37%), Positives = 360/656 (54%), Gaps = 107/656 (16%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP F+R++++RYP +AR + EFDNLYLDMNGI+
Sbjct: 1 MGVPKFFRYISERYPCL-------------SELAREHCIP-------EFDNLYLDMNGIV 40
Query: 61 HPCFHPDGKPA--PTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C HPD D +F+ IF+Y++ +F L++P+KL +L++DGVAPRAKMNQQR+R
Sbjct: 41 HNCSHPDDANIHFHLEEDQIFQDIFNYVEKLFHLIKPQKLFFLSVDGVAPRAKMNQQRSR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RFR A++A E+L + + G+ K + E DSN ITPGT FM L AL+ F
Sbjct: 101 RFRTAREA-------EQLETKASQRGE----KRQHERFDSNCITPGTVFMERLQLALRSF 149
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
++ +++ P WQ +VILS PGEGEHKIM YIR ++ P FDPNTRHCLYGLDADLI
Sbjct: 150 LRTKISLDPLWQKCRVILSGEETPGEGEHKIMDYIRYLKSQPNFDPNTRHCLYGLDADLI 209
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
+L L THE+HF +LRE + K G N V +
Sbjct: 210 ILGLCTHELHFVVLREEV------------------------KFGRN------VKRATLE 239
Query: 299 KKKYQFLNIWVLREYLQYELD-IPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIR 357
+ ++ L++ +LREYL+ E + + ++ +++DD+V + F VGNDF+P++P L I
Sbjct: 240 ETRFYLLHLGLLREYLELEFNELSTKEKKLDVAQLIDDWVLMGFMVGNDFIPNLPCLHIS 299
Query: 358 EGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKR--------- 408
A+ LL Y + + +GG + + G++ L R++ F+ +++ E Q F+
Sbjct: 300 SNALPLLYKTYIQVYPQLGGNINERGKLNLRRLQIFMTALSEVELQQFEDHFDDLKYMNA 359
Query: 409 ---------TRIQQAYEYNE-------AMKLNARRESS---------------EELLQAP 437
+ IQ A E A+ N+ + SS EE +
Sbjct: 360 KTEAFDVDVSEIQSASANGESFNSDLVALIDNSMKASSEIDFIITLYDYDSDDEEHFEDL 419
Query: 438 VAVADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSW 497
A +++ YK YY +KF+ E + +++ Y+ L W+ YYY+ V SW
Sbjct: 420 TDEASSLRHEFQNYKRNYYRNKFK---REMKGDLVEELTHHYITALQWILDYYYRGVQSW 476
Query: 498 QWFYPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDP 557
W+YP+HYAPF SDLK++ +++I F LG PF PF QL+ LPAASS LP Y +LM +P
Sbjct: 477 DWYYPFHYAPFISDLKNIENVKIHFQLGRPFLPFQQLLAVLPAASSKLLPIAYHDLMLNP 536
Query: 558 SSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRN 613
S + +FYP +F+ D+NGK+ W+ VV +PFIDE+ LL + E LT E RN
Sbjct: 537 DSALAEFYPTEFESDLNGKKHDWEAVVLIPFIDERRLLEAMRPCENCLTTAERSRN 592
>gi|326327749|pdb|2Y35|A Chain A, Crystal Structure Of Xrn1-Substrate Complex
Length = 1140
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 243/637 (38%), Positives = 353/637 (55%), Gaps = 88/637 (13%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP F+R++++RYP +AR + EFDNLYLDMNGI+
Sbjct: 1 MGVPKFFRYISERYPCL-------------SELAREHCIP-------EFDNLYLDMNGIV 40
Query: 61 HPCFHPDGKPAPTSYDD--VFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C HPD ++ +F+ IF+Y+D +F L++P++L +L++DGVAPRAKMNQQR+R
Sbjct: 41 HNCSHPDDNNIHFHLEEEQIFQEIFNYVDKLFYLIKPQRLFFLSVDGVAPRAKMNQQRSR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RFR A++A + EA+ + R E E E DSN ITPGT+FM L L+ F
Sbjct: 101 RFRTAREAEQQEAKAAQ-RGELREH----------ERFDSNCITPGTEFMVRLQEGLRAF 149
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
++ +++ P WQ VILS PGEGEHKIM YIR + P +DPNTRHCLYGLDA LI
Sbjct: 150 LKTKISTDPLWQRCTVILSGQEAPGEGEHKIMDYIRYMKTQPDYDPNTRHCLYGLDAALI 209
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
+L L THE+HF +LRE + K G N V T +
Sbjct: 210 ILGLCTHELHFVVLREEV------------------------KFGRN------VKRTSVE 239
Query: 299 KKKYQFLNIWVLREYLQYELD-IPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIR 357
+ ++ L++ +LREYL+ E D + ++ +++DD+V + F VGNDF+PH+P L I
Sbjct: 240 ETRFFLLHLGLLREYLELEFDALRTDEHKLDIAQLIDDWVLMGFLVGNDFIPHLPCLHIS 299
Query: 358 EGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYE-DQIFQKRTRIQQAYE 416
A+ LL Y + +GG + + G++ L R++ FI ++ E D + ++
Sbjct: 300 SNALPLLYRTYIGIYPTLGGNINENGKLNLRRLQIFISALTEVELDHFKEHADDLKYMNN 359
Query: 417 YNEAMKLNARRESSEELLQAPVAV-------------------ADTVKLGE-PGYKERYY 456
+EA ++ + + L + + + V L E YK +Y
Sbjct: 360 KSEAFDMDVGEITESQNLDSDLGALINKSMLLYDDDSEEDCSDENAVLLKEFQNYKRNFY 419
Query: 457 ADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLS 516
+KF+ +P D++ +++ YV L WV YYY+ V SW W+YP+HY PF SDLK++
Sbjct: 420 RNKFK-RDPN--DELIEELCHHYVNALQWVLDYYYRGVQSWDWYYPFHYTPFISDLKNIE 476
Query: 517 DLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGK 576
+EI F +G PF PF QL+ LPAAS+ LP Y +LM P+SP+ +FYP +F+ D+NGK
Sbjct: 477 QVEIAFHMGTPFLPFQQLLAVLPAASAKLLPVAYHDLMLLPTSPLAEFYPLEFESDLNGK 536
Query: 577 RFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRN 613
+ W+ VV +PFIDE LL E L+ EE RN
Sbjct: 537 KHDWEAVVLIPFIDEGRLLAAMLPCEAQLSLEERERN 573
>gi|440639205|gb|ELR09124.1| hypothetical protein GMDG_03704 [Geomyces destructans 20631-21]
Length = 1005
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 211/412 (51%), Positives = 284/412 (68%), Gaps = 10/412 (2%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MG+PA ++WL+ +YP I+ V ED + D + VA PVD ++PNPNG EFDNLYLDMNGI+
Sbjct: 1 MGIPAAFKWLSTKYP-KILSPVIEDHRKDVDNVAIPVDATQPNPNGEEFDNLYLDMNGIV 59
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ +P P + +++ IF Y + +F +VRPRKLL +A+DGVAPRAKMNQQR+RRF
Sbjct: 60 HPCSHPEDRPPPANEEEMMLEIFKYTERVFNMVRPRKLLMIAVDGVAPRAKMNQQRSRRF 119
Query: 121 RAAKDAAEAEAEEERLRKEF--EEAGKLLSAKEKP---ETCDSNVITPGTQFMAVLSAAL 175
R+A++A E + ++ L K + G++ + + +T DSN ITPGT FM +L+A+L
Sbjct: 120 RSAQEAKEKDEDKAELLKMLRSQAGGQVEESTSEAMVTKTWDSNAITPGTPFMDILAASL 179
Query: 176 QYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDA 235
+Y+ +LN P W KVILSDA VPGEGEHKIM +IR QR+ P DPNTRH +YGLDA
Sbjct: 180 RYWTAYKLNTDPAWAKVKVILSDATVPGEGEHKIMQFIRSQRSSPDHDPNTRHVIYGLDA 239
Query: 236 DLIMLSLATHEIHFSILRE-VITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDD 294
DLIML LATHE HF +LRE V + C +C Q GH A EC G+ + +++ D
Sbjct: 240 DLIMLGLATHEPHFRVLREDVFFQDSKGRTCRLCNQKGHEARECRGQAKEKDGEFDEKDS 299
Query: 295 T-PIHKKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPT 353
P+ K + +L++ VLREYL+ EL +PN PF + ER +DD+VF+CFFVGNDFLPH+P+
Sbjct: 300 VQPL--KPFIWLHVSVLREYLEAELYVPNQPFRFDLERAIDDWVFMCFFVGNDFLPHLPS 357
Query: 354 LEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIF 405
LEIRE I+ LM ++R MGGY+T G V L+R + + +A ED IF
Sbjct: 358 LEIRENGIDTLMAIWRDNIPHMGGYVTKDGHVDLERAQFILDGLAKQEDAIF 409
Score = 195 bits (495), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 105/233 (45%), Positives = 142/233 (60%), Gaps = 9/233 (3%)
Query: 435 QAPV--AVADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQ 492
APV A D V+L E GY +RYY KF++ +P + + + V YVEGL WV YY+Q
Sbjct: 570 SAPVDEAAVDNVRLWEDGYADRYYEQKFKV-DPRDTE-FRHKVAKAYVEGLAWVLLYYFQ 627
Query: 493 DVCSWQWFYPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRN 552
SW+W+YPYHYAPFA+D L+D++I F G F+PF+QLMG +PAAS +P+ + +
Sbjct: 628 GCPSWEWYYPYHYAPFAADFVGLADMKIGFEKGRIFKPFEQLMGVMPAASRHTIPDVFHD 687
Query: 553 LMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFR 612
LMT+ S I +FYPPDF ID+NGK+FAWQGV LPFID K LL ++ L E R
Sbjct: 688 LMTNEDSEIIEFYPPDFPIDLNGKKFAWQGVALLPFIDAKRLLAAMEQRYPLLPPEVAAR 747
Query: 613 NSVMLDLLYVHPQH-PLYQQITLYCQLYHQLPPQDRFAWEIDVNASGGMNGYI 664
N+V D+L V H LY I + Q PQ ++++ S G+ G +
Sbjct: 748 NTVGNDVLLVSEAHQSLYDDIATHFYSKKQGSPQ----YQLNPRISDGLAGKV 796
>gi|307180136|gb|EFN68180.1| 5'-3' exoribonuclease 1 [Camponotus floridanus]
Length = 1644
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 252/663 (38%), Positives = 358/663 (53%), Gaps = 112/663 (16%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP F+R++++RYP + +V++E Q+ EFD LYLDMNGII
Sbjct: 1 MGVPKFFRYISERYPC-LSEVIKEH-QIP------------------EFDYLYLDMNGII 40
Query: 61 HPCFHP-DGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRR 119
H C HP D S +D+FK+IF YI+ +F ++RP+KL ++AIDGVAPRAK+NQQR RR
Sbjct: 41 HTCSHPNDDVCFRISEEDIFKNIFHYIEVLFNMIRPQKLFFMAIDGVAPRAKINQQRGRR 100
Query: 120 FRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFI 179
FRAAKDA EA+ + A L KEK DSN ITPGT FMA L L+ F+
Sbjct: 101 FRAAKDAEVQEAKAK--------AKGLEIPKEK--RFDSNCITPGTLFMAKLGEQLKLFV 150
Query: 180 QARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIM 239
+ +++ W+ K++ S + VPGEGEHKIM YIR + ++ N+RHCLYGLDADLIM
Sbjct: 151 EYKVSMDDTWKKCKILFSGSEVPGEGEHKIMDYIRYMKASKDYNCNSRHCLYGLDADLIM 210
Query: 240 LSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIHK 299
L L +HE +FS+LRE + QQ K TP +
Sbjct: 211 LGLCSHEPNFSLLREEVKFGKQQVKM-----------------------------TP-EE 240
Query: 300 KKYQFLNIWVLREYLQYELDIPNPP--FPINFERIVDDFVFLCFFVGNDFLPHMPTLEIR 357
K+ L++ +LREY+++E FP + E+I+DD+V + F VGNDF+PH+P L I
Sbjct: 241 TKFCLLHLSLLREYIEHEFSPIKDKLLFPFDIEKIIDDWVLMGFLVGNDFIPHLPNLHIA 300
Query: 358 EGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYEY 417
GA+ +L Y + GY+ +AG + LDR EKF+++++ + + F + + +E
Sbjct: 301 NGALPILYRAYMEVLPTLDGYINEAGTLKLDRFEKFMENLSHLDLEQFNEHYADLKYFES 360
Query: 418 NEAMKLNAR-----RESSEELLQAPVAVADT-----------VKLGE------------- 448
+ N ++S ++ + P + D + LG
Sbjct: 361 KTGRRPNETERHVYKKSEDDDIAIPQKIQDKDLDAVIKNTTEMSLGHFDDDEDYNDMDTI 420
Query: 449 ------------------PGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYY 490
+K YY +K E N + +V + YV + W YY
Sbjct: 421 DMDIIDDESDSDIYNMEFVQHKRDYYMNKLEYKNVDA--EVLRSQAEGYVRAIQWNLGYY 478
Query: 491 YQDVCSWQWFYPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKY 550
Y CSW W+YP+HYAP+ SD+KD DL++ F LGEPF PF QL+ LPA S LP +
Sbjct: 479 YHGCCSWSWYYPHHYAPYISDIKDFKDLKLEFELGEPFLPFQQLLAVLPAYSKDLLPMAF 538
Query: 551 RNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEEL 610
+ L+T+ SSPI +YP DF+ D+NGK+ W+ VV +PFIDEKLL+ + LT +E
Sbjct: 539 QTLLTEESSPIINYYPHDFKTDLNGKKQEWEAVVLIPFIDEKLLVAAMQPHLSKLTADED 598
Query: 611 FRN 613
RN
Sbjct: 599 ARN 601
>gi|195059493|ref|XP_001995648.1| GH17871 [Drosophila grimshawi]
gi|193896434|gb|EDV95300.1| GH17871 [Drosophila grimshawi]
Length = 1754
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 243/642 (37%), Positives = 361/642 (56%), Gaps = 101/642 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP F+R +++RYP + ++ E S P EFDNL+LD+NGI+
Sbjct: 1 MGVPKFFRHISERYP-CLSELAREH--------------SIP-----EFDNLFLDVNGIV 40
Query: 61 HPCFHPDGKPAPTSYDD--VFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C HPD ++ +F+ I++YID +F L++P+KL ++++DGVAPRAKMNQQR+R
Sbjct: 41 HNCSHPDDGNIHFHLEETQIFQDIYNYIDTLFYLIKPQKLFFVSVDGVAPRAKMNQQRSR 100
Query: 119 RFRAAKDAAEAEAE-----EERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSA 173
RFR A++A + +A+ E+R+ + F DSN ITPGT FM+ L
Sbjct: 101 RFRTAREAEQIDAKALQRGEKRMHERF----------------DSNCITPGTGFMSRLQK 144
Query: 174 ALQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGL 233
L+ F++ +++ WQ VILS PGEGEHKIM YIR + P FDPN RHCLYGL
Sbjct: 145 GLRCFLRTKVSTDTLWQKCCVILSGVETPGEGEHKIMDYIRYLKAQPDFDPNMRHCLYGL 204
Query: 234 DADLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVD 293
DADLI+L L THE+HF +LRE + K G N V
Sbjct: 205 DADLIILGLCTHELHFVVLREEV------------------------KFGKN------VK 234
Query: 294 DTPIHKKKYQFLNIWVLREYLQYEL-DIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMP 352
T + + ++ L++ +LREYL+ E ++ ++ +++DD+V + F VGNDF+P +P
Sbjct: 235 RTAVEETRFFLLHLGLLREYLELEFAELSKSERKLDVAQLIDDWVLMGFLVGNDFIPSLP 294
Query: 353 TLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRT-RI 411
L I A++LL Y R + +GG + + G + L R+ F+ +++ E QIF +++ ++
Sbjct: 295 LLHIHTNALSLLYKTYIRVYPQLGGNINEQGRLNLQRLAIFMNALSEVEMQIFDEQSDKL 354
Query: 412 QQAYEYNEAMKLNAR--RESSEELLQAPVAVADTVKL-----------------GE-PGY 451
A NEA ++ R ++L + +++KL GE +
Sbjct: 355 HYANSKNEAFDVDVEDLRNRDKDLT---ALIDNSMKLYEDDSDEDLSDEGAALNGEFQNF 411
Query: 452 KERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASD 511
K YY +KF+ E D + ++ YV L WV YYY+ V SW W+YPYHYAPF SD
Sbjct: 412 KRNYYRNKFK---NEMHDGLIAELGHHYVTALQWVLDYYYRGVQSWDWYYPYHYAPFISD 468
Query: 512 LKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQI 571
+ D+ ++I F +G+PF PF+QL+ LP ASS+ LP Y +LM +PSS + FYP +F+
Sbjct: 469 ITDIPSVKINFQMGKPFMPFEQLLAVLPPASSALLPVAYHDLMLNPSSTLADFYPKEFET 528
Query: 572 DMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRN 613
D+NGK W+ VV +PFID++ LL + + LT EE RN
Sbjct: 529 DLNGKMHEWEAVVLIPFIDQRRLLDAMSECDSQLTTEERLRN 570
>gi|339896661|ref|XP_001463108.2| putative 5'-3' exonuclease [Leishmania infantum JPCM5]
gi|321398929|emb|CAM65457.2| putative 5'-3' exonuclease [Leishmania infantum JPCM5]
Length = 1499
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 241/630 (38%), Positives = 355/630 (56%), Gaps = 76/630 (12%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP F+RW A+R+P I + P VD NLYLD+NGII
Sbjct: 1 MGVPKFFRWAAERFPSIITPFKDSPPPVD---------------------NLYLDINGII 39
Query: 61 HPCFHPD----GKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQR 116
H C HP+ + +PT ++ +++F Y++ +F ++PRK LA+DGVAPRAKMNQQR
Sbjct: 40 HNCTHPNDVDATRRSPTE-KEMIQAMFVYLEKLFNAIQPRKYFLLAVDGVAPRAKMNQQR 98
Query: 117 TRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQ 176
RR+RA + A E + +E E+ + DSN ITPGT FM +S Q
Sbjct: 99 QRRYRAGYEMMIAREEALAMGEE---------VPEEKDVFDSNCITPGTPFMVRVSKEFQ 149
Query: 177 YFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDAD 236
YFI +L+ P WQ ++I S + PGEGEHKI+ +IR ++ P +DPN HC+YGLDAD
Sbjct: 150 YFITMKLSTDPAWQGCQIIFSGHDCPGEGEHKIVDFIRRRKMQPNYDPNETHCMYGLDAD 209
Query: 237 LIMLSLATHEIHFSILREVITL-PGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDT 295
L+ML+LATHE HF +LREV+T PG +++ + E G V D
Sbjct: 210 LVMLALATHEPHFVLLREVVTFGPGSRKE-----RERQEEDEAKGL----------VKDK 254
Query: 296 PIHKK-KYQFLNIWVLREYLQYE----LDIPNPPFPINFERIVDDFVFLCFFVGNDFLPH 350
HK ++ L+I V R+YLQ E L I+FER++DDFVF+CFF+GNDFLP
Sbjct: 255 AYHKADEFVLLHINVFRDYLQLEVKGYLAKAKSSVSIDFERVIDDFVFMCFFIGNDFLPT 314
Query: 351 MPTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTR 410
+PT+ I +G+I L+ +Y + YLT GE+ E ++ V E + ++R +
Sbjct: 315 LPTIGINDGSIPALLRIYVDNMLSKSKYLTHKGEIDWRNAEVWLNEVGKLEFETLRRRQQ 374
Query: 411 IQQAYEYNEAMKLNARRESSEELLQAPVAVADTVKLGEPGYKERYYADKFEI-----SNP 465
+ ++ N ARR+ + E+ A V ++ +K+RYY +K +N
Sbjct: 375 EEAEFQKNR-----ARRDPTHEVDTASVIPITSIL----EFKQRYYGEKHGFAGGWDANS 425
Query: 466 EEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDL--EITFF 523
E++ ++++ YVEGL WV YYYQ V SW+WF+P++YAP ASD+ +L + ++F
Sbjct: 426 EDMQRLRE----HYVEGLMWVMHYYYQGVPSWKWFFPHYYAPMASDMVNLPAIAARVSFE 481
Query: 524 LGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGV 583
LG+PF+P QL+ LP S ++P+ Y L+ PSSP+ K+ P ID G R W+G+
Sbjct: 482 LGKPFQPHQQLLAVLPPMSYLSMPKAYWPLLRSPSSPLAKYLPEHIVIDREGARAPWEGI 541
Query: 584 VKLPFIDEKLLLRQTKKLEVFLTEEELFRN 613
V +PFIDE+ LL + ++ ++ E+ N
Sbjct: 542 VLIPFIDERTLLAAYESVQKNVSPEDAANN 571
>gi|302418923|ref|XP_003007292.1| 5'-3' exoribonuclease [Verticillium albo-atrum VaMs.102]
gi|261352943|gb|EEY15371.1| 5'-3' exoribonuclease [Verticillium albo-atrum VaMs.102]
Length = 894
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 210/453 (46%), Positives = 289/453 (63%), Gaps = 13/453 (2%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MG+PA +RWL+++YP I VVE+ P +G PV+ + PNPNG E DNLYLDMNGI+
Sbjct: 1 MGIPAAFRWLSNKYPKIISPVVEDQPLQMEDGTTIPVETTGPNPNGEEQDNLYLDMNGIV 60
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ +PAP +++ +F Y D + +VRPRKLL +A+DGVAPRAKMNQQR+RRF
Sbjct: 61 HPCSHPEDRPAPKDEEEMMLEVFKYTDRVVNMVRPRKLLMIAVDGVAPRAKMNQQRSRRF 120
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETC-----DSNVITPGTQFMAVLSAAL 175
R+A++A E E +++ L K ++ + E E+ DSN ITPGT FM L+ +L
Sbjct: 121 RSAQEAQEKEVDKQELLKLLKQQNGGILPPETLESMNKKAFDSNSITPGTPFMDTLATSL 180
Query: 176 QYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDA 235
+Y+ +LN P W K+I+SDA VPGEGEHKIM+Y+R QR P +DPNTRH +YGLDA
Sbjct: 181 RYWCAYKLNTDPAWARLKIIISDATVPGEGEHKIMNYVRSQRGSPDYDPNTRHVIYGLDA 240
Query: 236 DLIMLSLATHEIHFSILRE-VITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDD 294
DLIML LATHE HF +LRE V + + C +CGQ GH A C G+ D +++ D
Sbjct: 241 DLIMLGLATHEPHFRVLREDVFAQDAKAKMCKICGQKGHDARVCKGEAKDKDGEYD-EQD 299
Query: 295 TPIHKKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTL 354
+ K + +L++ + REYL ELD+P+ PF + ER +DD+VF+C FVGNDFLPH+P L
Sbjct: 300 KAVALKPFIWLHVSIFREYLAIELDVPDLPFRFDLERAIDDWVFMCCFVGNDFLPHLPAL 359
Query: 355 EIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQA 414
EIRE I+ L +++ MGGY+T G + L RV+ + +A ED IF++R
Sbjct: 360 EIRENGIDALTTIWKENLPHMGGYVTKDGHIDLKRVQLIMDGLAKQEDAIFKRRK----- 414
Query: 415 YEYNEAMKLNARRESSEELLQAPVAVADTVKLG 447
E + + NA+R ++ AD G
Sbjct: 415 -EQEDRREANAKRRKLQDERSGRGGRADASGRG 446
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 80/175 (45%), Positives = 104/175 (59%), Gaps = 8/175 (4%)
Query: 436 APVAVADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVC 495
A A D V++ E GY +RYY KF + + + K V YVEGLCWV YYYQ
Sbjct: 565 AEEAAIDHVRMWEEGYADRYYEQKFHVDRNDIAFRHK--VAQAYVEGLCWVLLYYYQGCP 622
Query: 496 SWQWFYPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMT 555
SW W+YPYHYAPFA+D DL +EI+F G +PF+QLM +PAAS ALPE + +LM
Sbjct: 623 SWDWYYPYHYAPFAADFADLDKIEISFEKGRISKPFEQLMSVMPAASRRALPEVFHDLML 682
Query: 556 DPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEEL 610
+ S + FYP +F+ID+NGK+FAWQ K +LLR K L ++
Sbjct: 683 NEDSEVIDFYPQEFEIDLNGKKFAWQAPHK------SMLLRGLKMPTTALGRSDI 731
>gi|429849601|gb|ELA24966.1| GTPase-activator protein for Ras-like GTPase, partial
[Colletotrichum gloeosporioides Nara gc5]
Length = 3409
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 208/438 (47%), Positives = 287/438 (65%), Gaps = 12/438 (2%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MG+PA +RWL+++YP I V+EE P +G PVD + PNPNG E DNLYLDMNGI+
Sbjct: 1 MGIPAAFRWLSNKYPKIISPVIEEQPVKMDDGSEIPVDTTGPNPNGEELDNLYLDMNGIV 60
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ +PAP +++ +F Y D + +VRPRKLL +A+DGVAPRAKMNQQR+RRF
Sbjct: 61 HPCSHPEDRPAPKDEEEMMLEVFRYTDRVVNMVRPRKLLMIAVDGVAPRAKMNQQRSRRF 120
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETC-----DSNVITPGTQFMAVLSAAL 175
R+A+DA + E ++E + K ++ + +E E+ DSN ITPGT FM +L+A+L
Sbjct: 121 RSAQDAQQKEEDKEEVMKLLKQQNGGVIPEETLESMTKKAFDSNSITPGTPFMDILAASL 180
Query: 176 QYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDA 235
+Y+ +L+ P W K+I+SDA VPGEGEHKIMS++R QR P +DPNTRH +YGLDA
Sbjct: 181 RYWCAYKLSTDPAWARLKIIISDATVPGEGEHKIMSFVRSQRISPDYDPNTRHVIYGLDA 240
Query: 236 DLIMLSLATHEIHFSILREVITLPGQQEK-CFVCGQVGHLAAECHGKPGDNPADWNGVDD 294
DLIML LATHE HF +LRE + + + C +CGQ GH A C G+ + +++ +
Sbjct: 241 DLIMLGLATHEPHFRVLREDVFFQDSKPRVCRICGQKGHEARNCRGEAKEKVGEFDEQEK 300
Query: 295 TPIHKKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTL 354
P K + +L++ +LREYL EL++P PF + ER +DD+VF+C FVGNDFLPH+P L
Sbjct: 301 APA-LKPFIWLHVSILREYLAVELNVPGLPFRFDLERALDDWVFMCCFVGNDFLPHLPAL 359
Query: 355 EIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQA 414
EIRE I+ L +++ MGGY+T G V L R + + +A ED IF++R +
Sbjct: 360 EIRENGIDTLTAIWKDNLPHMGGYVTKDGHVDLARAQLILNGLAKQEDGIFKRRKEQEDR 419
Query: 415 YEYNEAMKLNARRESSEE 432
E N RR+ EE
Sbjct: 420 REANA-----KRRKLQEE 432
Score = 181 bits (458), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 97/227 (42%), Positives = 130/227 (57%), Gaps = 7/227 (3%)
Query: 439 AVADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQ 498
A D V++ E GY +RYY KF + + + + V YVEGL WV YY+Q SW+
Sbjct: 556 AAMDHVRMWEEGYADRYYEQKFHVDRKD--IEFRHQVARAYVEGLSWVLLYYFQGCPSWE 613
Query: 499 WFYPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPS 558
W+YPYHYAPFA+D +L +EI F G RPF+QLM LPAAS ALPE + +LM +
Sbjct: 614 WYYPYHYAPFAADFVELDKMEIAFEKGRISRPFEQLMSVLPAASRHALPEVFHDLMLNED 673
Query: 559 SPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLD 618
S + FYP DF+ID+NGK+ AWQGV LPFI+ LL +K L+ + RN V D
Sbjct: 674 SEVIDFYPTDFEIDLNGKKMAWQGVALLPFIEMPRLLAAVEKKYPLLSAADRARNGVGRD 733
Query: 619 LLYVH-PQHPLYQQITLYCQLYHQLPPQDRFAWEIDVNASGGMNGYI 664
+L + H LY +IT Q P +++ S G++G I
Sbjct: 734 VLLLSDAHHDLYDEITTNFYSKKQGEP----TLKLNPRTSDGLSGKI 776
>gi|296813543|ref|XP_002847109.1| 5'-3' exoribonuclease 2 [Arthroderma otae CBS 113480]
gi|238842365|gb|EEQ32027.1| 5'-3' exoribonuclease 2 [Arthroderma otae CBS 113480]
Length = 1027
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 213/425 (50%), Positives = 285/425 (67%), Gaps = 24/425 (5%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQ-VDGEGVARPVDVSKPNPNGMEFDNLYLDMNGI 59
MGVPA +RWL+ +YP + VVEE PQ +DG+ + PVD +KPNPNG E DNLYLDMNGI
Sbjct: 1 MGVPALFRWLSSKYPKIVSAVVEEQPQEIDGQEI--PVDTTKPNPNGEEMDNLYLDMNGI 58
Query: 60 IHPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRR 119
+HPC HP+GKP P + ++ IF Y D + +VRPRK+L +A+DGVAPRAKMNQQR+RR
Sbjct: 59 VHPCTHPEGKPPPANEGEMMLEIFKYTDRVVNMVRPRKVLMIAVDGVAPRAKMNQQRSRR 118
Query: 120 FRAAKDAA---EAEAEEERLRKEFEEAGKLLSAKEK--PETCDSNVITPGTQFMAVLSAA 174
FR+A+DA E + E RL K+ + ++ E+ +T D+NVITPGT FM +L+ A
Sbjct: 119 FRSAQDAKAEDEKKVEFARLLKKQKRGKTDVTIAEEVITKTWDTNVITPGTPFMDILALA 178
Query: 175 LQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGL- 233
L+Y++ +L+ PGW+ KVI+SDA VPGEGEHKIM +IR QR P +DPNTRH +YGL
Sbjct: 179 LRYWVAYKLSTDPGWEKLKVIISDATVPGEGEHKIMEFIRSQRACPEYDPNTRHVIYGLV 238
Query: 234 -----------DADLIMLSLATHEIHFSILRE-VITLPGQQEKCFVCGQVGHLAAECHGK 281
DADLIML L THE HF +LRE V + C +CGQ GH+ C GK
Sbjct: 239 SDTNIYTSRLDDADLIMLGLGTHEPHFRVLREDVFFQESKARTCKLCGQAGHVEEACTGK 298
Query: 282 PGDNPADWN-GVDDTPIHKKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLC 340
+ +++ +P+ K + +L++ +LREYL E+ +P PFP + ER +DD+VF+C
Sbjct: 299 AKEKQGEFDEKQKGSPL--KPFIWLHVSILREYLAVEMQVPQQPFPFDLERALDDWVFMC 356
Query: 341 FFVGNDFLPHMPTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVY 400
FFVGNDFLPH+P+LEIRE I+ L+ ++R MGGYLT G V L + + +Q +A
Sbjct: 357 FFVGNDFLPHLPSLEIRENGIDTLIAIWRDNIPQMGGYLTKDGRVDLAKAQLILQGLAKQ 416
Query: 401 EDQIF 405
ED IF
Sbjct: 417 EDAIF 421
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 109/240 (45%), Positives = 152/240 (63%), Gaps = 9/240 (3%)
Query: 428 ESSEELLQAPVA---VADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLC 484
E +E +L+ P DTV+L E GY +RYY KF++ + + K V YVEGL
Sbjct: 559 EDTEAVLEKPKEDEMPPDTVRLWEDGYADRYYEQKFKVDRKDIAFRHK--VARAYVEGLS 616
Query: 485 WVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSS 544
WV YY+Q SW W+YPYHYAPFA+D D+ +++ F G PF+PF+QLMG LPAAS+
Sbjct: 617 WVLLYYFQGCPSWTWYYPYHYAPFAADFVDIGAMDVQFTKGIPFKPFEQLMGVLPAASNH 676
Query: 545 ALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVF 604
A+PE +R+LM+D +S I FYP DF +D+NGK+FAWQGV LPFIDEK LL+ K
Sbjct: 677 AIPEVFRDLMSDENSEIIDFYPEDFPVDLNGKKFAWQGVALLPFIDEKRLLKAMDKRYPL 736
Query: 605 LTEEELFRNSVMLDLLYVHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVNASGGMNGYI 664
L+EEE RN++ D+L + +HPLY+ +T Y + Q ++++ S G+ G +
Sbjct: 737 LSEEEQARNAMGKDVLLLSEKHPLYESLT--ANFYSK--KQGSAKLKLNMRISEGLGGKV 792
>gi|322709893|gb|EFZ01468.1| 5'->3' exoribonculease Dhp1 [Metarhizium anisopliae ARSEF 23]
Length = 930
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 214/426 (50%), Positives = 283/426 (66%), Gaps = 11/426 (2%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MG+PA +RWL+++YP I V+E+ P V +G PVD S NPNG EFDNLYLDMNGI+
Sbjct: 1 MGIPAAFRWLSNKYPKIISPVIEDQPVVMPDGSIVPVDTSSRNPNGEEFDNLYLDMNGIV 60
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ KPAP + + +F Y D + +VRPRKLL +A+DGVAPRAKMNQQR+RRF
Sbjct: 61 HPCSHPEDKPAPEDEEAMMLEVFKYTDRVVNMVRPRKLLMIAVDGVAPRAKMNQQRSRRF 120
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETC-----DSNVITPGTQFMAVLSAAL 175
R+A+DA E E ++ L K ++ + + E+ D+N ITPGT FM +L+ +L
Sbjct: 121 RSAQDAKEKEENKKELLKLVKQQNGGVLPPDHIESVAKKVFDNNSITPGTPFMDILAVSL 180
Query: 176 QYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDA 235
+Y+ Q +LN P W KV++SDA VPGEGEHKIMS+IR QR P +DPNTRH +YGLDA
Sbjct: 181 RYWCQYKLNTDPAWAKMKVLISDATVPGEGEHKIMSFIRSQRASPEYDPNTRHVIYGLDA 240
Query: 236 DLIMLSLATHEIHFSILRE-VITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDD 294
DLIML LATHE HF +LRE V G+ C +CGQ GH A C G+ + D VDD
Sbjct: 241 DLIMLGLATHEPHFRVLREDVFFQEGRARTCQLCGQKGHEARNCRGEAKEKADD---VDD 297
Query: 295 TP--IHKKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMP 352
P + K + +L++ VLREYL EL +P PF + ER +DD+VF+C FVGNDFLPH+P
Sbjct: 298 KPGNVTLKPFIWLHVSVLREYLAAELAVPGLPFRFDLERAIDDWVFMCCFVGNDFLPHLP 357
Query: 353 TLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQ 412
LEIRE I+ L ++R MGGY+T G + L+R ++ + +A ED+IF++R +
Sbjct: 358 ALEIREHGIDTLTTIWRNNLPTMGGYVTKDGHIDLERAQRILDGLAKQEDEIFKRRKEQE 417
Query: 413 QAYEYN 418
E N
Sbjct: 418 DRREAN 423
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 92/179 (51%), Positives = 117/179 (65%), Gaps = 2/179 (1%)
Query: 442 DTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFY 501
DTV+L E GY +RYY KF S P++I + +V YVEGL WV YY+Q SW+W+Y
Sbjct: 562 DTVRLWEDGYADRYYQQKFHRS-PDDI-SFRHEVARAYVEGLAWVLLYYFQGCPSWEWYY 619
Query: 502 PYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPI 561
PYHYAPFA+D KDL++++I F G +PF+QLM LPAAS ALPE + LMTD S I
Sbjct: 620 PYHYAPFAADFKDLANMDIIFEKGRVSKPFEQLMSVLPAASRHALPEVFHPLMTDEDSEI 679
Query: 562 YKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLL 620
FYP DF++D+NGK+ AWQGV LPFID LL + L+ E RN+ D+L
Sbjct: 680 IDFYPEDFEVDLNGKKMAWQGVALLPFIDMPRLLAAVQTKYPLLSSAEAARNATGRDVL 738
>gi|253743695|gb|EET00027.1| 5'-3' exoribonuclease 2 [Giardia intestinalis ATCC 50581]
Length = 900
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 261/708 (36%), Positives = 373/708 (52%), Gaps = 95/708 (13%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDP-----QVDGEGVARPVDVSKPNPNGMEFDNLYLD 55
MGVP+F+RW+ RY I +V+E P +DG+ + P G DNLY D
Sbjct: 1 MGVPSFFRWIVQRYSSVIDNVLEAFPDTYEANIDGDAL----------PLGFAIDNLYFD 50
Query: 56 MNGIIHPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQ 115
NG+IHPCFHP+G+ P + +VF+ IF +D + + RPR+LLYLA+DG APRAK+NQQ
Sbjct: 51 TNGLIHPCFHPEGRAQPQTEAEVFEEIFQVLDRVVSICRPRRLLYLAVDGPAPRAKLNQQ 110
Query: 116 RTRRFRAAKDAAEAEAEEERLRKEF---EEAGKLLSAKEKPET-------CDSNVITPGT 165
R+RRF AA + E +ER F E + K L ++ T DSN ITPGT
Sbjct: 111 RSRRFMAAYERQIKERVQERRLMSFGDVEPSLKKLGSEMNDATESTAQTNLDSNAITPGT 170
Query: 166 QFMAVLSAALQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPN 225
FM+ LS AL+Y++ R W+ V+ +DA PGEGEHKIMS++R+QR+ PG+DP
Sbjct: 171 PFMSRLSVALKYYVANRQANSKLWRHLTVLYADAWSPGEGEHKIMSFVRVQRSQPGYDPC 230
Query: 226 TRHCLYGLDADLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGK--PG 283
T HC+YGLDADLIML+L THE +F ILR+V+ + C CG + + G P
Sbjct: 231 TIHCIYGLDADLIMLALGTHEPNFLILRDVVDTANLKRTCTRCGHLRISSEHNTGTVDPF 290
Query: 284 DNPADWNGVDDTPIH----------KKKYQFLNIWVLREYLQYELDIPNPPFPINFERIV 333
+ G D P + + +QFL++ LREYLQ E D + + FER +
Sbjct: 291 TTRHEDQGGMDCPFYPGSSLRPVAFRSPFQFLHVSRLREYLQREFDATD----VIFERAI 346
Query: 334 DDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHVYRR-EFTAMGGYLTDAGEVLLDRVEK 392
DDFVFL F VGNDFLPH+ L+IRE A+ +++ Y++ + + G+LT +V +
Sbjct: 347 DDFVFLTFLVGNDFLPHIQCLDIREDAVIRMIYFYKQLKRSRKIGFLTTGSDVNIGDFHV 406
Query: 393 FIQSVAVYEDQIFQKR------TRIQQAYEYNEAMKLNARRESSEELLQ----------- 435
++ +A E +IF+ R R QA E ++ + E Q
Sbjct: 407 LLRELAEQEARIFKARASGKANARHAQASETPDSKDETPGERAVREYFQFFRKDDKRIIK 466
Query: 436 ----------------APVAVADTV---KLGEPGYKERYY-----ADKFEISNPE----- 466
VAV + +L +PGY +RYY D F N E
Sbjct: 467 DAMDDYYALHDKPLPPTTVAVKHILIKYELEKPGYAQRYYLGIGLMDDFPEKNYESDKFK 526
Query: 467 -EIDKVKKDVVLKYVEGLCWVCRYYY-QDVCSWQWFYPYHYAPFASDLKDLSDLEITFF- 523
E+ + + + Y++GL WV RYY+ V W W+YPYH++P DL S +
Sbjct: 527 AELKQRIQTMCYHYIDGLIWVFRYYFLPKVEDWGWYYPYHHSPLLVDLAAASQTYTRTWK 586
Query: 524 ----LGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFA 579
PF P++QL+ +P AS++ LP R+LMTDP+S + KFYP + D++ K
Sbjct: 587 QHTVSNRPFNPYEQLLAVMPPASAALLPPVMRHLMTDPASDLNKFYPSLIKCDLSEKTAL 646
Query: 580 WQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVHPQHP 627
W+GV+ LPFI+ L+ +K LT E RN + ++ +H HP
Sbjct: 647 WKGVLLLPFINSSELISAAQKSYGQLTPLEQQRNRLSDPVILIHKDHP 694
>gi|449278569|gb|EMC86380.1| 5'-3' exoribonuclease 1, partial [Columba livia]
Length = 1710
Score = 420 bits (1080), Expect = e-114, Method: Compositional matrix adjust.
Identities = 248/682 (36%), Positives = 362/682 (53%), Gaps = 100/682 (14%)
Query: 48 EFDNLYLDMNGIIHPCFHPDGKPAP--TSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDG 105
EFDNLYLDMNGIIH C HP+ S D +F IF Y++ +F +++PRK+ ++A+DG
Sbjct: 3 EFDNLYLDMNGIIHQCSHPNDDDVHFRISEDKIFADIFHYLEVLFRIIKPRKVFFMAVDG 62
Query: 106 VAPRAKMNQQRTRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGT 165
VAPRAKMNQQR RRFR+AK+A E++++K E+ G+ L + + DSN ITPGT
Sbjct: 63 VAPRAKMNQQRGRRFRSAKEA------EDKIKKALEK-GETLPTEAR---FDSNCITPGT 112
Query: 166 QFMAVLSAALQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPN 225
+FMA L L+YF+ +++ WQ V LS PGEGEHKIM +IR ++ P DPN
Sbjct: 113 EFMARLHEHLKYFVNMKISTDKSWQGVTVYLSGHETPGEGEHKIMEFIRSEKAKPHHDPN 172
Query: 226 TRHCLYGLDADLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDN 285
TRHCLYGLDADLIML L +HE HF++LRE + G++ + C
Sbjct: 173 TRHCLYGLDADLIMLGLTSHEAHFALLREEVRFGGKKSQ-RACAP--------------- 216
Query: 286 PADWNGVDDTPIHKKKYQFLNIWVLREYLQYELD--IPNPPFPINFERIVDDFVFLCFFV 343
++T H L++ ++REY+ YE F + ERI+DD++ + F V
Sbjct: 217 -------EETTFH-----LLHLSLMREYIDYEFSPVKDKISFEYDIERIIDDWILMGFLV 264
Query: 344 GNDFLPHMPTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQ 403
GNDF+PH+P L I A+ LL Y +GGY+ + G + L R EK++ ++ ++ +
Sbjct: 265 GNDFIPHLPHLHINHDALPLLYRTYMAILPELGGYINENGHLNLKRFEKYLTKLSDFDRE 324
Query: 404 IFQK--------RTRIQQAY---------------------EYNEAMKLNARRESSEELL 434
F + +++ Y ++ L A + E+
Sbjct: 325 HFSEVFVDLKWFESKVGNKYLNEAAGIAAEEARKNKQKKQKAQENSICLAALEKKEGEV- 383
Query: 435 QAPVAVADTVKLGEP-----------GYKERYYADKFEISNPEEIDKVKKDVVLKYVEGL 483
TV EP YK YY K + D D YV+ +
Sbjct: 384 -----TPKTVLEDEPEDDDLFETEFRQYKRTYYMTKMGVEVVS--DDFLADQAECYVQAI 436
Query: 484 CWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASS 543
W+ YYY V SW W+YPYHYAP+ SD++++ +L+I F LG+PF PF+QL+ LPAAS
Sbjct: 437 QWILHYYYHGVQSWSWYYPYHYAPYLSDIRNIGELKIKFELGKPFMPFEQLLAVLPAASK 496
Query: 544 SALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEV 603
LP+ Y++LM SPI ++YPPDF+ D+NGK+ W+ VV +PFIDEK LL+ +
Sbjct: 497 DLLPKCYQHLMISQDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLQAMESCNK 556
Query: 604 FLTEEELFRNSVMLDLLYVHPQHPLYQQITLY---------CQLYHQLPPQDRFAWEIDV 654
L EEE RN+ L+Y + + +Q ++ + C ++ P D + EI
Sbjct: 557 CLKEEEKRRNTHSACLMYWYDKDAEFQYMSPWPEKFPAIERCHTRYKTIPLDAWHVEITH 616
Query: 655 NASGGMN-GYIWLCERNGLRSI 675
N +N ++ C L+ I
Sbjct: 617 NKITKINKSALYFCGFPTLKHI 638
>gi|407922574|gb|EKG15671.1| Zinc finger CCHC-type protein [Macrophomina phaseolina MS6]
Length = 1073
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 213/453 (47%), Positives = 289/453 (63%), Gaps = 34/453 (7%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPA +RWL+ +YP + VVE +P +G PVD +KPNPNG EFDNLYLDMNGI+
Sbjct: 1 MGVPALFRWLSTKYPKIVSSVVEAEPVEYPDGTVEPVDTTKPNPNGEEFDNLYLDMNGIV 60
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ K P + +++ +F Y D + +VRPRKLL +A+DGVAPRAKMNQQR+RRF
Sbjct: 61 HPCSHPEDKDPPENEEEMMIEVFKYTDRVVNMVRPRKLLMIAVDGVAPRAKMNQQRSRRF 120
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEK--------------------PETCDSNV 160
RAA+DA + +A+ E K+L++++K +T DSN
Sbjct: 121 RAAQDAKQKDADA-------AEFAKMLASQKKNRRGSGSDEDEEESAEAQIVKKTWDSNS 173
Query: 161 ITPGTQFMAVLSAALQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLP 220
ITPGT FM +L+ +L+Y+ +LN PGW+ KVI+SDA VPGEGEHKIM ++R QR P
Sbjct: 174 ITPGTPFMDILAKSLRYWCAYKLNTDPGWEKLKVIISDATVPGEGEHKIMEFVRSQRRSP 233
Query: 221 GFDPNTRHCLYGLDADLIMLSLATHEIHFSILRE-VITLPGQQEKCFVCGQVGHLAAECH 279
DPNTRH +YGLDADLIML LATHE HF +LRE V + C CGQ GH A +C
Sbjct: 234 FHDPNTRHVIYGLDADLIMLGLATHEPHFRVLREDVFFNDAKPRTCRRCGQTGHYADQCR 293
Query: 280 GKPGDNPADWNGVDDTPIHKKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFL 339
G+ D + V + KK + +L++ +LREYL E+ + N F + ER +DD+VF+
Sbjct: 294 GE-MKKKEDEHDVKQNKVTKKPFIWLHVSILREYLAAEMFVENQGFAFDLERALDDWVFM 352
Query: 340 CFFVGNDFLPHMPTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAV 399
CFFVGNDFLPH+P+LEIRE I+ L++++R MGGY+T G V ++R + ++ +A
Sbjct: 353 CFFVGNDFLPHLPSLEIREQGIDTLINIWRENIPRMGGYVTKDGHVDMNRAQLILEGLAK 412
Query: 400 YEDQIFQKRTRIQQAYEYNEAMKLNARRESSEE 432
ED IF++R + E + RR+ EE
Sbjct: 413 LEDGIFKRRKETEDRREAAQ-----KRRKQQEE 440
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 110/253 (43%), Positives = 153/253 (60%), Gaps = 8/253 (3%)
Query: 442 DTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFY 501
D V++ E GY +RYY KF + +P++I+ + V Y EGL WV YY+Q SW W+Y
Sbjct: 602 DDVRMWEEGYADRYYEQKFHV-DPKDIE-FRHQVARDYAEGLAWVLLYYFQGCPSWTWYY 659
Query: 502 PYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPI 561
P+HYAPFA D DL +E+ F G+PFRP++QLMG LPAAS+ A+PE +R LM + S I
Sbjct: 660 PHHYAPFAQDFVDLGKMELKFEKGQPFRPYEQLMGVLPAASNHAIPEVFRPLMEEQDSDI 719
Query: 562 YKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLY 621
FYP DF +D+NGK+ AWQGV LPFIDEK LL+ L+ EE RN D+L
Sbjct: 720 IDFYPEDFVVDLNGKKMAWQGVAILPFIDEKRLLKAMNTKYPLLSAEEHARNEFGKDVLL 779
Query: 622 VHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVNASGGMNGYIWLCERNGLRSIIPSPV- 680
+HPLY+++ Q P+ + +I S G+ G + E +S + P+
Sbjct: 780 FSTRHPLYEEVAQQWYSKKQGEPKHKLNPQI----SEGLAGEVEKNEDYLPQSALEFPLE 835
Query: 681 -KGLPDIERNQAM 692
KG+PD+E NQ++
Sbjct: 836 TKGMPDLEENQSI 848
>gi|194762996|ref|XP_001963620.1| GF20490 [Drosophila ananassae]
gi|190629279|gb|EDV44696.1| GF20490 [Drosophila ananassae]
Length = 1605
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 244/637 (38%), Positives = 364/637 (57%), Gaps = 88/637 (13%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP F+R++++RYP + ++ E S P EFDNLYLDMNGI+
Sbjct: 1 MGVPKFFRYISERYP-CLSELAREH--------------SIP-----EFDNLYLDMNGIV 40
Query: 61 HPCFHPDGKPAPTSYDD--VFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C HPD ++ +F+ IF+Y+D +F L++P++L +LA+DGVAPRAKMNQQR+R
Sbjct: 41 HNCSHPDDSNIHFHLEEAQIFQDIFNYVDKLFYLIKPQRLFFLAVDGVAPRAKMNQQRSR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RFR++++A + E++ + R E E E DSN ITPGT+FM L L+ F
Sbjct: 101 RFRSSREAEQMESKALQ-RGERREH----------ERFDSNCITPGTEFMQRLQVRLRAF 149
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
+Q +++ P WQ VILS PGEGEHKIM YIR + P FDPNTRHCLYGLDADLI
Sbjct: 150 LQTKISTDPLWQRCSVILSGQETPGEGEHKIMDYIRFMKAQPDFDPNTRHCLYGLDADLI 209
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
+L L THE+HF +LRE + K G N V T +
Sbjct: 210 ILGLCTHELHFVVLREEV------------------------KFGRN------VKRTSVE 239
Query: 299 KKKYQFLNIWVLREYLQYELDIPNP-PFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIR 357
+ ++ L++ +LREYL+ E D N ++ +++DD+V + F VGNDF+PH+P L I
Sbjct: 240 ETRFFLLHLGLLREYLELEFDDLNTDEHKLDVAQLIDDWVLMGFMVGNDFIPHLPCLHIS 299
Query: 358 EGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRT-RIQQAYE 416
A+ LL Y + + +GG + + G++ L R++ F+ ++ E + F++ ++
Sbjct: 300 SNALPLLYSTYIKIYPKLGGNINENGKLNLQRLQVFLTALTEVELEQFKEHADDLKYMNA 359
Query: 417 YNEAMKLNARRESSEELLQAPVA--VADTVKLGE------------------PGYKERYY 456
EA ++ + E + +A + +++KL E YK YY
Sbjct: 360 KTEAFDVDVSEITGTESYDSDLAALIDNSMKLYEGDSDEDLCDEAASLMHEFQNYKRNYY 419
Query: 457 ADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLS 516
KF+ +P D++ +++ YV L W+ YYY+ V SW W+YP+HYAPF SD++++
Sbjct: 420 CTKFKSDSP---DQLIEELSYHYVTALQWILDYYYRGVQSWDWYYPFHYAPFISDIRNVE 476
Query: 517 DLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGK 576
+++ F LGEPF PF QL+ LP+AS +P + +LM +P SP+ +F+P DF+ D+NGK
Sbjct: 477 KVKVNFHLGEPFFPFQQLLAVLPSASFKLMPTAFHDLMLNPESPLAEFFPVDFESDLNGK 536
Query: 577 RFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRN 613
+ W+ VV +PFIDEK LL E+ L+E E RN
Sbjct: 537 KHDWEAVVLIPFIDEKRLLNAMVPCELRLSEAEKERN 573
>gi|322692778|gb|EFY84668.1| 5'-3' exoribonuclease 2 [Metarhizium acridum CQMa 102]
Length = 929
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 213/426 (50%), Positives = 282/426 (66%), Gaps = 11/426 (2%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MG+PA +RWL+++YP I V+E+ P V +G PVD + NPNG EFDNLYLDMNGI+
Sbjct: 1 MGIPAAFRWLSNKYPKIISPVIEDQPVVMPDGSTVPVDTTSRNPNGEEFDNLYLDMNGIV 60
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ KPAP + + +F Y D + +VRPRKLL +A+DGVAPRAKMNQQR+RRF
Sbjct: 61 HPCAHPEDKPAPEDEEAMMLEVFKYTDRVVNMVRPRKLLMIAVDGVAPRAKMNQQRSRRF 120
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETC-----DSNVITPGTQFMAVLSAAL 175
R+A+DA E E +E L K ++ + + E+ D+N ITPGT FM +L+ +L
Sbjct: 121 RSAQDAKEKEENKEELLKLVKQQNGGVLPPDHIESVAKKIFDNNSITPGTPFMDILAVSL 180
Query: 176 QYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDA 235
+Y+ Q +LN P W KV++SDA VPGEGEHKIMS+IR QR P +DPNTRH +YGLDA
Sbjct: 181 RYWCQYKLNTDPAWAKMKVLISDATVPGEGEHKIMSFIRSQRASPEYDPNTRHVIYGLDA 240
Query: 236 DLIMLSLATHEIHFSILRE-VITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDD 294
DLIML LATHE HF +LRE V G+ C +CGQ GH A C G+ + D +DD
Sbjct: 241 DLIMLGLATHEPHFRVLREDVFFQEGKARTCQLCGQKGHEARNCRGEAKEKAGD---IDD 297
Query: 295 TPIHK--KKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMP 352
P + K + +L++ VLREYL EL +P PF + ER +DD+VF+C FVGNDFLPH+P
Sbjct: 298 KPGNATLKPFIWLHVSVLREYLAAELAVPALPFRFDLERAIDDWVFMCCFVGNDFLPHLP 357
Query: 353 TLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQ 412
LEIRE I+ L ++R MGGY+T G + L+R ++ + +A ED IF++R +
Sbjct: 358 ALEIREHGIDTLTTIWRNNLPTMGGYVTKDGHIDLERAQRILDGLAKQEDAIFKRRKEQE 417
Query: 413 QAYEYN 418
E N
Sbjct: 418 DRREAN 423
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 92/179 (51%), Positives = 116/179 (64%), Gaps = 2/179 (1%)
Query: 442 DTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFY 501
DTV+L E GY +RYY KF S P++I + V YVEGL WV YY+Q SW+W+Y
Sbjct: 562 DTVRLWEDGYADRYYQQKFHRS-PDDI-SFRHKVARAYVEGLAWVLLYYFQGCPSWEWYY 619
Query: 502 PYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPI 561
PYHYAPFA+D KDL++++I F G +PF+QLM LPAAS ALPE + LMTD S I
Sbjct: 620 PYHYAPFAADFKDLANMDIAFEKGRVSKPFEQLMSVLPAASRHALPEVFHPLMTDEDSEI 679
Query: 562 YKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLL 620
FYP DF++D+NGK+ AWQGV LPFID LL + L+ E RN+ D+L
Sbjct: 680 IDFYPEDFEVDLNGKKMAWQGVALLPFIDMPRLLAAVQNKYPLLSSAEAARNARGRDVL 738
>gi|164658822|ref|XP_001730536.1| hypothetical protein MGL_2332 [Malassezia globosa CBS 7966]
gi|159104432|gb|EDP43322.1| hypothetical protein MGL_2332 [Malassezia globosa CBS 7966]
Length = 1133
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 208/412 (50%), Positives = 276/412 (66%), Gaps = 15/412 (3%)
Query: 26 PQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGIIHPCFHPDGKPAPTSYDDVFKSIFDY 85
P +GE V PVD+S+PNPNG E+D LYLDMNGI+HPC HP+GKP P + +D+ +F Y
Sbjct: 2 PGPNGEPVDIPVDISRPNPNGEEYDCLYLDMNGIVHPCTHPEGKPPPETEEDMMAEVFKY 61
Query: 86 IDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRFRAAKDAAEAEAEEERLRKEFEEAGK 145
+ + ++RPRKLL +AIDGVAPRAKMNQQR+RRFR+A+DA + E+ +E + G
Sbjct: 62 TERVINMIRPRKLLMMAIDGVAPRAKMNQQRSRRFRSAQDAKILHQQREQELEERKRKGL 121
Query: 146 LLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQARLNQIPGWQFTKVILSDANVPGEG 205
+ ++ DSN ITPGT FM +L+++L+Y+I +LN PGW+ V+LSDA+VPGEG
Sbjct: 122 AGENERIEKSWDSNAITPGTPFMDLLASSLRYWIAHKLNTDPGWKNLCVVLSDASVPGEG 181
Query: 206 EHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIMLSLATHEIHFSILRE-VITLPGQQEK 264
EHKIM YIR +R+ P DPN RH +YGLDADLIMLSLATHE HF +LRE V + +
Sbjct: 182 EHKIMDYIRRKRSDPNHDPNMRHVIYGLDADLIMLSLATHEPHFKVLREDVFSQDAKHRG 241
Query: 265 CFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIHKKKYQFLNIWVLREYLQYELDIPNPP 324
C CGQ GH+AA C G+ + + P KK + FL++ LREYLQ EL P
Sbjct: 242 CHRCGQEGHVAANCRGEARN--------EAKPFQKKPFIFLDVPTLREYLQVELRTPGTS 293
Query: 325 FPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHVYRREFTAMGGYLTDAGE 384
FP + ER +DD+VFL FFVGNDFLPH+P+LEIREGAI+ L+ +++RE M GY+T+ G+
Sbjct: 294 FPFDLERAIDDWVFLIFFVGNDFLPHLPSLEIREGAIDTLLRIWKRELPNMSGYVTNNGK 353
Query: 385 VLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYEYNEAMKLNARRESSEELLQA 436
V L + + +A ED IF+KR E E + N RR +S +A
Sbjct: 354 VELANAQYILDGLAEVEDDIFRKRK------ETEERQEANKRRHASSNHQEA 399
Score = 211 bits (538), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 120/259 (46%), Positives = 154/259 (59%), Gaps = 12/259 (4%)
Query: 438 VAVADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSW 497
V DTVKL EPGY+ERYY KF + + K ++ VV YVEGLCWV YYYQ SW
Sbjct: 649 VEYEDTVKLWEPGYRERYYRQKFGVELSDT--KFRRSVVQAYVEGLCWVLAYYYQGCPSW 706
Query: 498 QWFYPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDP 557
+WFYPYHYAPFA+D D+ D+ I F EPFRPF+QLMG LPAAS S LP ++ LMT+
Sbjct: 707 KWFYPYHYAPFAADFTDVQDMHIDFGESEPFRPFEQLMGVLPAASKSNLPVPFQQLMTNE 766
Query: 558 SSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVML 617
S I FYP +F IDMNGK+ AWQGV LPFIDE LL K LT++E+ RNS
Sbjct: 767 ESEIIDFYPNEFSIDMNGKKMAWQGVALLPFIDENRLLHALHKRYAQLTDDEVRRNSFGR 826
Query: 618 DLLYVHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVNASGGMNGYIW----LCERNGLR 673
++L+V L+ + +LY + D A ID + G I +
Sbjct: 827 NVLFVSEDADLF---PVMSRLYTKR--SDGRADVIDTARHAQIAGTIAPDTSCVPGSTFY 881
Query: 674 SIIPSPVKGLPDIERNQAM 692
S +PS V G+ DI+ ++++
Sbjct: 882 SPLPS-VSGMQDIQNDRSI 899
>gi|310796685|gb|EFQ32146.1| XRN 5'-3' exonuclease [Glomerella graminicola M1.001]
Length = 1020
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 203/424 (47%), Positives = 280/424 (66%), Gaps = 7/424 (1%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MG+PA +RWL+++YP I V+EE P +G PVD PNPNG E DNLYLDMNGI+
Sbjct: 1 MGIPAAFRWLSNKYPKIISPVIEEQPVKMEDGSEIPVDTMGPNPNGEELDNLYLDMNGIV 60
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ +PAP +++ +F Y D + +VRPRKLL +A+DGVAPRAKMNQQR+RRF
Sbjct: 61 HPCSHPEDRPAPKDEEEMMLEVFKYTDRVVNMVRPRKLLMIAVDGVAPRAKMNQQRSRRF 120
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETC-----DSNVITPGTQFMAVLSAAL 175
R+A++A E E +++ L K ++ + + + E+ DSN ITPGT FM +L+A+L
Sbjct: 121 RSAQEAQEKEEDKQELLKLLKQQSGGIVSNDSLESVTKKAFDSNSITPGTPFMDILAASL 180
Query: 176 QYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDA 235
+Y+ +LN P W K+I+SDA VPGEGEHKIM+++R QR P +DPNTRH +YGLDA
Sbjct: 181 RYWCAYKLNTDPAWARLKIIISDATVPGEGEHKIMNFVRSQRISPDYDPNTRHVIYGLDA 240
Query: 236 DLIMLSLATHEIHFSILREVITLPGQQEK-CFVCGQVGHLAAECHGKPGDNPADWNGVDD 294
DLIML LATHE HF +LRE + + K C +CGQ GH A C G+ + +++ +
Sbjct: 241 DLIMLGLATHEPHFRVLREDVFFQDSKAKMCKLCGQKGHEARACRGQAKEKVGEFDEQEK 300
Query: 295 TPIHKKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTL 354
P K + +L++ +LREYL EL++P PF + ER +DD+VF+C FVGNDFLPH+P L
Sbjct: 301 GPA-LKPFIWLHVSILREYLAAELNVPGLPFRFDLERAIDDWVFMCCFVGNDFLPHLPAL 359
Query: 355 EIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQA 414
EIRE I+ L +++ MGGY+ G V L R + + +A ED IF++R +
Sbjct: 360 EIRENGIDTLTAIWKDNLPVMGGYVVKDGHVDLGRAQLILNGLAKQEDSIFKRRKETEDR 419
Query: 415 YEYN 418
E N
Sbjct: 420 REAN 423
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 90/199 (45%), Positives = 120/199 (60%), Gaps = 3/199 (1%)
Query: 436 APVAVADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVC 495
A A D V++ E GY +RYY KF + + + + V YVEGL WV YY+Q
Sbjct: 552 AEEAAVDHVRMWEEGYADRYYEQKFHVDRNDH--EFRHKVARAYVEGLSWVLLYYFQGCP 609
Query: 496 SWQWFYPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMT 555
SW+W+YPYHYAPFA+D DL +++ F G +PF+QLM +PAAS SALPE + +LM
Sbjct: 610 SWEWYYPYHYAPFAADFVDLDKMDVRFEKGRISKPFEQLMSVMPAASRSALPEVFHDLML 669
Query: 556 DPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSV 615
+ S + FYP +F+ID+NGK+ AWQGV LPFI+ LL +K L+ + RN V
Sbjct: 670 NEDSEVIDFYPTEFEIDLNGKKMAWQGVALLPFIEMPRLLAAVEKKYPLLSAADQARNGV 729
Query: 616 MLD-LLYVHPQHPLYQQIT 633
D LL H LY +IT
Sbjct: 730 GRDVLLLSDAHHELYDEIT 748
>gi|298713577|emb|CBJ27105.1| dhm exonuclease [Ectocarpus siliculosus]
Length = 709
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 248/604 (41%), Positives = 348/604 (57%), Gaps = 96/604 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MG+P +RWL D+YP+ +++ +D N + DNLYLDMNG+I
Sbjct: 131 MGIPKLFRWLTDQYPV----------------ISQRLDQGL-NEHTAPIDNLYLDMNGVI 173
Query: 61 HPC-FHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRR 119
H C H D + + ++F+ IF + D +F LVRPR+LLYLA+DG APRAKMNQQR+RR
Sbjct: 174 HMCTHHNDDEFIELNEKEMFRRIFIFTDRMFKLVRPRRLLYLAVDGTAPRAKMNQQRSRR 233
Query: 120 FRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETC--DSNVITPGTQFMAVLSAALQY 177
FR++K+A E E +R GKL PE DSN ITPGT FM L+ A Q
Sbjct: 234 FRSSKEA-EVNMAEMVMRD-----GKL------PEVTRFDSNCITPGTDFMFKLTKAFQA 281
Query: 178 FIQARLNQIPGWQ-FTKVILSDANVPGEGEHKIMSYIRLQRNL-PGFDPNTRHCLYGLDA 235
+I+ +++ P WQ +V+ S +VPGEGEHK+M YIR R P + + RHCLYGLDA
Sbjct: 282 WIEYKMDTDPFWQQNARVVFSGPDVPGEGEHKVMDYIREARETEPDWRDDLRHCLYGLDA 341
Query: 236 DLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDT 295
DLIMLSL THE HFS+LRE +++ + K KP D P + D
Sbjct: 342 DLIMLSLVTHEKHFSLLREKMSVRHSRRK----------------KPKD-PITYTRND-- 382
Query: 296 PIHKKKYQFLNIWVLREYL----QYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHM 351
++ + + +LRE L Q + + P PF ER++DDFVF+C VGNDFLP++
Sbjct: 383 ------FELMEVSLLREMLRLQFQSQANDPKLPFKFELERVIDDFVFMCILVGNDFLPNV 436
Query: 352 PTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRI 411
P L+I +GA+N +M++Y+ MGGYLT ++ R+E F+ V+ E F++R
Sbjct: 437 PHLDISDGALNHMMNMYKLLLPKMGGYLTKKDQIHHGRLEMFMHEVSRREAMYFRRRGV- 495
Query: 412 QQAYEYNEAMKLNARRESSEELLQAPVAVADTVKLGEPGYKERYYADKFEISNPEEIDKV 471
E S+ +LQ P Y +RYY K ++ +PE+ ++
Sbjct: 496 ----------------EESDLVLQDPGK-----------YTDRYYKTKLDL-DPEQ-EEE 526
Query: 472 KKDVVLKYVEGLCWVCRYYYQDV---CSWQWFYPYHYAPFASDLKDLSDLEITFFLGEPF 528
K+ VV Y+EGL WV +YY+ V SW W+YP+ YAP AS +K+L D++I+F G PF
Sbjct: 527 KRAVVKHYLEGLYWVLKYYHVGVDAGGSWSWYYPHLYAPLASSMKNLMDIDISFEKGRPF 586
Query: 529 RPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPF 588
QL+ LP S+ LPE Y+ LM +P+SPI ++YP +F+ D NGK +W+ VVK+PF
Sbjct: 587 PNLLQLLSVLPPQSADFLPEPYKALMVEPTSPILEYYPTEFECDANGKTASWETVVKIPF 646
Query: 589 IDEK 592
IDEK
Sbjct: 647 IDEK 650
>gi|389640341|ref|XP_003717803.1| 5'-3' exoribonuclease 2 [Magnaporthe oryzae 70-15]
gi|351640356|gb|EHA48219.1| 5'-3' exoribonuclease 2 [Magnaporthe oryzae 70-15]
Length = 1020
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 210/425 (49%), Positives = 289/425 (68%), Gaps = 9/425 (2%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MG+PA +RWL+ +YP I V+E+ P +G + PVD++KPNPNG EFDNLYLDMNGI+
Sbjct: 1 MGIPAAFRWLSTKYPKIISPVIEDKPVEMEDGTSIPVDITKPNPNGEEFDNLYLDMNGIV 60
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ +PAP +++ IF Y D +F +VRPRK+L +A+DGVAPRAKMNQQR+RRF
Sbjct: 61 HPCAHPEDRPAPQDEEEMMLEIFKYTDRVFNMVRPRKVLMIAVDGVAPRAKMNQQRSRRF 120
Query: 121 RAAKDAAE-AEAEEERLRKEFEEAGKLLSAKE----KPETCDSNVITPGTQFMAVLSAAL 175
R+A++A E AE + E L+ ++ G +SA+ + D+N ITPGT FM +L+ +L
Sbjct: 121 RSAQEAKEKAEDKLELLKLLKQQKGGDVSAETLESVTKKAFDTNSITPGTPFMDILAGSL 180
Query: 176 QYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDA 235
+Y+ +LN PGW K+I+SDA VPGEGEHKIM ++R QR+ P DPNTRH +YGLDA
Sbjct: 181 RYWCAYKLNTDPGWANVKIIISDATVPGEGEHKIMDFVRSQRSSPDHDPNTRHVIYGLDA 240
Query: 236 DLIMLSLATHEIHFSILRE-VITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDD 294
DLIML LATHE HF +LRE V G+ C +CGQ GH A +C G+ +++ +
Sbjct: 241 DLIMLGLATHEPHFRVLREDVFFQQGKPRLCKLCGQKGHDAQQCKGEVKKKEGEFDEKQN 300
Query: 295 T-PIHKKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPT 353
P+ K + +L++ +LREYL EL +P+ PF + ER VDD++FLC FVGNDFLPH+P
Sbjct: 301 AEPL--KPFIWLHVAILREYLNVELYVPDLPFRFDLERAVDDWIFLCCFVGNDFLPHLPA 358
Query: 354 LEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQ 413
LEIRE I L ++++ MGGY+T G + L+RV+ + +A ED IF+KR +
Sbjct: 359 LEIRENGIITLTSIWKQNLPRMGGYVTKDGHIDLERVQYIMDGLAKQEDSIFRKRKEQED 418
Query: 414 AYEYN 418
+ N
Sbjct: 419 RRDAN 423
Score = 180 bits (456), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 92/194 (47%), Positives = 120/194 (61%), Gaps = 3/194 (1%)
Query: 440 VADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQW 499
DTV+L E GY +RYY KF + +P+ ++ + V YVEGL WV YY+Q SW+W
Sbjct: 546 AVDTVRLWEDGYTDRYYEQKFHV-DPKNVE-FRHKVAHAYVEGLSWVLLYYFQGCPSWEW 603
Query: 500 FYPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSS 559
FYPYHYAPFA D L DLEI+F G +P++QLM LPAAS LP + +LMT S
Sbjct: 604 FYPYHYAPFAQDFVGLKDLEISFEKGRKSKPYEQLMSVLPAASRDNLPPIFHDLMTKEDS 663
Query: 560 PIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDL 619
I FYP DF++D+NGK+FAWQGV LPFI+ LL + L+ +E RN + D+
Sbjct: 664 EIIDFYPEDFEVDLNGKKFAWQGVALLPFIEMDRLLAAVQAKYPELSADEAARNGLGRDV 723
Query: 620 LYVHPQH-PLYQQI 632
L + H PLY +
Sbjct: 724 LIISDAHAPLYDDL 737
>gi|171690192|ref|XP_001910021.1| hypothetical protein [Podospora anserina S mat+]
gi|170945044|emb|CAP71155.1| unnamed protein product [Podospora anserina S mat+]
Length = 1078
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 214/439 (48%), Positives = 283/439 (64%), Gaps = 24/439 (5%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MG+PA +RWL+ +YP I V+E+ P +G PVD +KPNPNG EFDNLYLDMNGI+
Sbjct: 1 MGIPAAFRWLSTKYPKIISPVIEDTPITMDDGAVIPVDTTKPNPNGEEFDNLYLDMNGIV 60
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAI----------------- 103
HPC HP+ +PAP +++ IF Y D + +VRPRKLL +A+
Sbjct: 61 HPCSHPEDRPAPKDEEEMMVEIFKYTDRVVNMVRPRKLLMIAVGMSNPSLDYQRQKLTRS 120
Query: 104 DGVAPRAKMNQQRTRRFRAAKDAAEAEAEEERLRKEFEEAGK-----LLSAKEKPETCDS 158
DGVAPRAKMNQQR+RRFRAA+DA E E ++E+L K ++ K + + DS
Sbjct: 121 DGVAPRAKMNQQRSRRFRAARDAKEKEEDKEKLLKMLQKDKKSTVQVQPVEEVVQKAFDS 180
Query: 159 NVITPGTQFMAVLSAALQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRN 218
N ITPGT FM +L+A+L+Y+ +LN P W KVI+SDA +PGEGEHKIM Y+R QRN
Sbjct: 181 NSITPGTPFMDILAASLRYWCSYKLNTDPAWAKIKVIISDATIPGEGEHKIMEYVRSQRN 240
Query: 219 LPGFDPNTRHCLYGLDADLIMLSLATHEIHFSILRE-VITLPGQQEKCFVCGQVGHLAAE 277
PG DPNTRH +YGLDADLIML LATHE HF +LRE V + C +CGQ GH AA
Sbjct: 241 SPGHDPNTRHVIYGLDADLIMLGLATHEPHFRVLREDVFAQDARPRLCKLCGQKGHDAAN 300
Query: 278 CHGKPGDNPADWNGVDDTPIHKKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFV 337
C G+ + ++ G D K + +L++ + REYL EL++P PF + ER +DD+V
Sbjct: 301 CRGEAKEKEGEF-GEKDRAAPLKPFIWLHVNIFREYLAVELNVPGLPFAFDLERAIDDWV 359
Query: 338 FLCFFVGNDFLPHMPTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSV 397
F+CFFVGNDFLPH+P LEIRE I+ L+ +++ +MGGYLT G V L+R + + +
Sbjct: 360 FMCFFVGNDFLPHLPALEIRENGIDTLVAIWKDNLPSMGGYLTKDGHVDLERAQLIMAGL 419
Query: 398 AVYEDQIFQKRTRIQQAYE 416
A ED IF++R + E
Sbjct: 420 AKQEDAIFRRRKETEDRRE 438
Score = 196 bits (499), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 103/229 (44%), Positives = 141/229 (61%), Gaps = 6/229 (2%)
Query: 440 VADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQW 499
DTV+L E GY +RYY KF++ +P++I+ + V YVEGL WV YY+Q SW+W
Sbjct: 594 AVDTVRLWEEGYADRYYEQKFKV-DPKDIE-FRHKVARAYVEGLAWVLMYYFQGCPSWEW 651
Query: 500 FYPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSS 559
FYPYHYAPFA+D DL + I F G RPF+QLM LPAAS A+PE + +LMT+ S
Sbjct: 652 FYPYHYAPFAADFVDLGKMTINFDKGRISRPFEQLMSVLPAASRHAIPEVFHDLMTNEDS 711
Query: 560 PIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDL 619
I FYP +F ID+NGK+ +WQG+ LPFI+ LL+ + + L+EE+ RN ++
Sbjct: 712 EIIDFYPEEFDIDLNGKKMSWQGIALLPFIEMPRLLKAMEPKQKLLSEEDRARNEPGKEV 771
Query: 620 LYVHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVNASGGMNGYIWLCE 668
L + HP+Y IT + Y + P D+ EID S G++G I E
Sbjct: 772 LIISDAHPVYDDIT--QKFYSKKPVGDKV--EIDSALSEGLSGKIEKIE 816
>gi|345562792|gb|EGX45805.1| hypothetical protein AOL_s00117g10 [Arthrobotrys oligospora ATCC
24927]
Length = 1102
Score = 417 bits (1072), Expect = e-113, Method: Compositional matrix adjust.
Identities = 203/420 (48%), Positives = 279/420 (66%), Gaps = 5/420 (1%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQ-VDGEGVARPVDVSKPNPNGMEFDNLYLDMNGI 59
+ VPAF+RWL+ +YP I V+E PQ +DG + PVD + PNPNG E DNLYLDMNGI
Sbjct: 46 LSVPAFFRWLSQKYPKIISPVLEALPQEIDGHEI--PVDTTGPNPNGEELDNLYLDMNGI 103
Query: 60 IHPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRR 119
+HPC HP+ +P P + ++ +F Y + + +VRPRK+L +A+DGVAPRAKMNQQR+RR
Sbjct: 104 VHPCSHPEDRPPPETEQEMMLEVFRYTERVVAMVRPRKVLMMAVDGVAPRAKMNQQRSRR 163
Query: 120 FRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFI 179
FR+A++A E E + K G + + + + DSN ITPGT FM +LS AL+Y++
Sbjct: 164 FRSAQEAKEKEEQVAEFVKLLASKGTDIDSNLQKKGWDSNAITPGTPFMDILSIALKYWV 223
Query: 180 QARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIM 239
+LN PGW K+I+SD++VPGEGEHKIM ++R QR+ P DPNTRH +YGLDADLIM
Sbjct: 224 AHKLNTDPGWAKLKIIISDSSVPGEGEHKIMEFVRGQRSHPEHDPNTRHVIYGLDADLIM 283
Query: 240 LSLATHEIHFSILRE-VITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
L LATHE HF +LRE V + C +C Q GH A EC GK + +++
Sbjct: 284 LGLATHEPHFRVLREDVFAQDSKPRVCKICNQKGHRAEECTGKAREKEGEFDEKSKA-NP 342
Query: 299 KKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIRE 358
+K + +L++ +LREYL EL +P F + ER +DD+VFLCFFVGNDFLPH P+LEIR+
Sbjct: 343 RKPFIWLDVGILREYLAVELHVPGLSFQWDLERAIDDWVFLCFFVGNDFLPHFPSLEIRD 402
Query: 359 GAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYEYN 418
I+ L ++R AM G++T G V L+R + + +A ED IF+KR ++++ E N
Sbjct: 403 AGIDTLTSIWRENLAAMKGFVTTDGNVNLERAQFILDGLAKQEDAIFRKRRQVEERREAN 462
Score = 212 bits (540), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 116/257 (45%), Positives = 153/257 (59%), Gaps = 11/257 (4%)
Query: 441 ADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWF 500
ADTVKL EPGY++RYY KF P +++V YVEGLCWV YY+Q SW W+
Sbjct: 600 ADTVKLWEPGYRDRYYEQKF--GRPPSDTNFRREVANAYVEGLCWVLLYYFQGCPSWTWY 657
Query: 501 YPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSP 560
YPYHYAPFA D +++ +L+I F LG+PF+PF+QLMG LPAAS +P+ + LMT+ +S
Sbjct: 658 YPYHYAPFAQDFENIGELKINFTLGKPFKPFEQLMGVLPAASKHNIPKAFWPLMTEENSE 717
Query: 561 IYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLL 620
I FYP DF ID+NGK+FAWQGV LPFIDE LL K+ + EE RN + +LL
Sbjct: 718 IIDFYPEDFPIDLNGKKFAWQGVAILPFIDETRLLDAMNKIYPQIPAEEKERNEMGNELL 777
Query: 621 YVHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVNASGGMNGYIWLCERNGLRSIIPSPV 680
HPLY + L CQ + + E+D S G++G + RS + P
Sbjct: 778 LFSESHPLYDE--LACQFFSKRAVDGDH--ELDPRLSEGLSGGVRKDPNFIPRSTVSFPF 833
Query: 681 KGLP-----DIERNQAM 692
+ DIE +Q+M
Sbjct: 834 TNVKSDIYGDIEDDQSM 850
>gi|452822189|gb|EME29211.1| 5'-3' exoribonuclease [Galdieria sulphuraria]
Length = 571
Score = 417 bits (1071), Expect = e-113, Method: Compositional matrix adjust.
Identities = 255/622 (40%), Positives = 341/622 (54%), Gaps = 100/622 (16%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MG+P FYRWL++R+P V+ ++ + + EFDN YLDMNGII
Sbjct: 1 MGIPKFYRWLSERFP-----VINQELETE-----------------YEFDNFYLDMNGII 38
Query: 61 HPCFHPDG--KPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C H + + + +++F SIF+Y D ++ +V+P+KLL+LA+DGVAPRAKMNQQR+R
Sbjct: 39 HLCTHNNNSLQLVWNNVEEMFDSIFEYTDRLYRIVKPKKLLFLAVDGVAPRAKMNQQRSR 98
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RFR+AKDA +A AE +E + + + DSN ITPGT+FM VLS + +
Sbjct: 99 RFRSAKDAEKALAEAIERGEEIKSSSRF----------DSNCITPGTEFMHVLSQRFKDW 148
Query: 179 IQARLNQIPGWQ-FTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADL 237
I P WQ +I S +VPGEGEHKIM +IR + +HCLYGLDADL
Sbjct: 149 ISFMTTHDPAWQQGCDIIFSGPDVPGEGEHKIMDFIRTHTEDKEW-TERKHCLYGLDADL 207
Query: 238 IMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTP- 296
IML L TH HFS+LRE + Q+K +G + P
Sbjct: 208 IMLGLVTHFPHFSLLREKYVI---QKK-------------------------DGEANKPK 239
Query: 297 IHKKKYQFLNIWVLREYLQYELD---IPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPT 353
+++ FL + +LR+ L E F + ER+VDDFVF+C FVGNDFLP++P
Sbjct: 240 FFFEEFHFLQLALLRDMLYLEFKPFGDTELSFAYDLERVVDDFVFMCIFVGNDFLPNLPH 299
Query: 354 LEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQ 413
L+I GA+N++ VY+ MGGYLT+ + R E F+Q VA E FQ R
Sbjct: 300 LDINTGALNVMFAVYKSLLPQMGGYLTERHRIHPKRTEWFLQQVAKAERAYFQYR----- 354
Query: 414 AYEYNEAMKLNARRESSEELLQAPVAVADTVKLGEPGYKERYYADKFEISNPEEIDKVKK 473
A E NE P + D YK YY K I EE KV+
Sbjct: 355 AVEENE-----------------PGFLGDE-------YKSYYYQSKLGIRMEEEPHKVR- 389
Query: 474 DVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQ 533
++ KY EGL ++ +YYYQ SW+WFYP YAP ASD+ L ++ + F G PFRP Q
Sbjct: 390 ELCQKYYEGLHFILQYYYQGCPSWKWFYPSFYAPLASDMVQLEEIRVEFEQGHPFRPLTQ 449
Query: 534 LMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKL 593
L+ LP SSS LPE RNLM SP+ ++YPPDF++D+NGKR +W+ +V +PFIDE
Sbjct: 450 LLAVLPPESSSFLPEPLRNLMISDLSPLNEYYPPDFEVDLNGKRNSWEAIVLIPFIDENR 509
Query: 594 LLR--QTKKLEVFLTEEELFRN 613
LL T LT+EE RN
Sbjct: 510 LLNALATVDTRTELTDEERCRN 531
>gi|326471133|gb|EGD95142.1| 5'-3' exoribonuclease [Trichophyton tonsurans CBS 112818]
Length = 1066
Score = 417 bits (1071), Expect = e-113, Method: Compositional matrix adjust.
Identities = 215/444 (48%), Positives = 286/444 (64%), Gaps = 43/444 (9%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQ-VDGEGVARPVDVSKPNPNGMEFDNLYLDMNGI 59
MGVPA +RWL+ +YP + VVEE PQ +DG+ + PVD++KPNPNG E DNLYLDMNGI
Sbjct: 1 MGVPALFRWLSSKYPKIVSAVVEEQPQEIDGQEI--PVDITKPNPNGEEMDNLYLDMNGI 58
Query: 60 IHPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAI---------------- 103
+HPC HP+GKP P + ++ IF Y D + +VRPRK+L +A+
Sbjct: 59 VHPCTHPEGKPPPANEGEMMLEIFKYTDRVVNMVRPRKVLMIAVVAKGSYSLSFSFPTGT 118
Query: 104 ---------------DGVAPRAKMNQQRTRRFRAAKDAA---EAEAEEERLRKEFEEAGK 145
DGVAPRAKMNQQR+RRFR+A+DA E + E +L K+ + K
Sbjct: 119 YSFCDMFGTNVGFFLDGVAPRAKMNQQRSRRFRSAQDAKAEDEKKVEFAKLLKKQKRGKK 178
Query: 146 LLSAKEK--PETCDSNVITPGTQFMAVLSAALQYFIQARLNQIPGWQFTKVILSDANVPG 203
++ E+ +T D+NVITPGT FM +L+ AL+Y++ +L+ PGW+ KVI+SDA VPG
Sbjct: 179 DVTVAEEVITKTWDTNVITPGTPFMDILALALRYWVAYKLSTDPGWEKLKVIISDATVPG 238
Query: 204 EGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIMLSLATHEIHFSILRE-VITLPGQQ 262
EGEHKIM +IR QR P +DPNTRH +YGLDADLIML L THE HF +LRE V +
Sbjct: 239 EGEHKIMEFIRSQRACPEYDPNTRHVIYGLDADLIMLGLGTHEPHFRVLREDVFFQESKA 298
Query: 263 EKCFVCGQVGHLAAECHGKPGDNPADWN-GVDDTPIHKKKYQFLNIWVLREYLQYELDIP 321
C +CGQ GH+ C GK + +++ P+ K + +L++ VLREYL E+ +P
Sbjct: 299 RTCKLCGQAGHVEEACTGKAKEKRGEFDEKQKGNPL--KPFIWLHVSVLREYLAVEMQVP 356
Query: 322 NPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHVYRREFTAMGGYLTD 381
PFP N ER +DD+VF+CFFVGNDFLPH+P+LEIRE I+ L+ ++R MGGYLT
Sbjct: 357 QQPFPFNLERALDDWVFMCFFVGNDFLPHLPSLEIRENGIDTLIAIWRDNIPQMGGYLTK 416
Query: 382 AGEVLLDRVEKFIQSVAVYEDQIF 405
G V L + + +Q +A ED IF
Sbjct: 417 DGRVDLAKAQLILQGLAKQEDAIF 440
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 102/192 (53%), Positives = 135/192 (70%), Gaps = 2/192 (1%)
Query: 442 DTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFY 501
DTV+L E GY +RYY KF +S P++I + V YVEGL WV YY+Q SW W+Y
Sbjct: 605 DTVRLWEDGYADRYYEQKFGVS-PKDI-AFRHKVARAYVEGLSWVLLYYFQGCPSWTWYY 662
Query: 502 PYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPI 561
PYHYAPFA+D D+ ++++ F G PF+PF+QLMG LPAAS+ A+PE +R+LM+D +S I
Sbjct: 663 PYHYAPFAADFVDIGEMDVQFTKGTPFKPFEQLMGVLPAASNHAIPEVFRDLMSDENSEI 722
Query: 562 YKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLY 621
FYP DF +D+NGK+FAWQGV LPFIDEK LL K L+EEE RN++ D+L
Sbjct: 723 IDFYPEDFPVDLNGKKFAWQGVALLPFIDEKRLLAAMDKRYHLLSEEEQARNAMGKDVLL 782
Query: 622 VHPQHPLYQQIT 633
+ +HPLY+ +T
Sbjct: 783 LSEKHPLYESLT 794
>gi|401415084|ref|XP_003872038.1| putative 5'-3' exonuclease [Leishmania mexicana MHOM/GT/2001/U1103]
gi|322488260|emb|CBZ23505.1| putative 5'-3' exonuclease [Leishmania mexicana MHOM/GT/2001/U1103]
Length = 1527
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 238/630 (37%), Positives = 353/630 (56%), Gaps = 76/630 (12%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP F+RW A+R+P I + P VD NLYLD+NGII
Sbjct: 1 MGVPKFFRWAAERFPSIITPFKDSPPPVD---------------------NLYLDINGII 39
Query: 61 HPCFHPD----GKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQR 116
H C HP+ + +PT ++ +++F Y++ +F ++PRK LA+DGVAPRAKMNQQR
Sbjct: 40 HNCTHPNDVDATRRSPTE-KEMIQAMFIYLEKLFNAIQPRKYFLLAVDGVAPRAKMNQQR 98
Query: 117 TRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQ 176
RR+RA + A E + +E E+ + DSN ITPGT FM +S Q
Sbjct: 99 QRRYRAGYEMMIARQEALAMGEE---------VPEEKDVFDSNCITPGTPFMVRVSKEFQ 149
Query: 177 YFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDAD 236
YFI +L+ P WQ ++I S + PGEGEHKI+ +IR ++ P +DPN HC+YGLDAD
Sbjct: 150 YFITMKLSTDPAWQGCQIIFSGHDCPGEGEHKIVDFIRRRKMQPNYDPNETHCMYGLDAD 209
Query: 237 LIMLSLATHEIHFSILREVITL-PGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDT 295
L+ML+LATHE HF +LREV+T PG +++ + E G V D
Sbjct: 210 LVMLALATHEPHFVLLREVVTFGPGSRKE-----RERQEEDEAKGL----------VKDK 254
Query: 296 PIHKK-KYQFLNIWVLREYLQYE----LDIPNPPFPINFERIVDDFVFLCFFVGNDFLPH 350
HK ++ L+I V R+YLQ E L ++FER++DDFVF+CFF+GNDFLP
Sbjct: 255 AYHKADEFVLLHINVFRDYLQLEVKGYLAKAKSSASMDFERVIDDFVFMCFFIGNDFLPT 314
Query: 351 MPTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTR 410
+PT+ I +G+I L+ +Y + YLT GE+ E ++ V E + ++R +
Sbjct: 315 LPTIGINDGSIPALLRIYVDNMLSKNKYLTHKGEIDWRNAEVWLNEVGKLEFETLRRRQQ 374
Query: 411 IQQAYEYNEAMKLNARRESSEELLQAPVAVADTVKLGEPGYKERYYADKFEI-----SNP 465
+ ++ N ARR+ + E+ V ++ +K+RYY +K +N
Sbjct: 375 EEAEFQKNR-----ARRDPTHEVDATSVMPITSIL----EFKQRYYGEKHGFAGGWDANS 425
Query: 466 EEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDL--EITFF 523
++ ++++ YVEGL WV YYYQ V SW+WF+P++YAP ASD+ +L + ++F
Sbjct: 426 ADMRRLRE----HYVEGLMWVMHYYYQGVPSWKWFFPHYYAPMASDMVNLPAIAARVSFE 481
Query: 524 LGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGV 583
LG+PF+P QL+ LP S ++P+ Y L+ PSSP+ K+ P ID G R W+G+
Sbjct: 482 LGKPFQPHQQLLAVLPPMSYLSMPKAYWPLLRSPSSPLAKYLPEHIVIDREGARAPWEGI 541
Query: 584 VKLPFIDEKLLLRQTKKLEVFLTEEELFRN 613
V +PFIDE+ LL + ++ ++ E+ N
Sbjct: 542 VLIPFIDERTLLAAYESVQKNVSPEDAANN 571
>gi|299747213|ref|XP_001836883.2| 5'-3' exoribonuclease 2 [Coprinopsis cinerea okayama7#130]
gi|298407417|gb|EAU84500.2| 5'-3' exoribonuclease 2 [Coprinopsis cinerea okayama7#130]
Length = 1156
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 217/452 (48%), Positives = 302/452 (66%), Gaps = 25/452 (5%)
Query: 2 GVPAFYRWLADRYPLSIVDVVEED----PQVDGEGVARPVDVSKPNPNGMEFDNLYLDMN 57
GVPA +RWL+ +YP I+ V EED P + + V PV++++PNPNG+EFDNLYLDMN
Sbjct: 18 GVPALFRWLSKKYPKIILPVEEEDDIKVPDENDQEVTIPVNMAQPNPNGVEFDNLYLDMN 77
Query: 58 GIIHPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRT 117
GI PAP + +D+ +F Y + + +VRPRKLL++AIDGVAPRAKMNQQR+
Sbjct: 78 GI----------PAPETEEDMMVEVFKYTERVVNMVRPRKLLFMAIDGVAPRAKMNQQRS 127
Query: 118 RRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETC-DSNVITPGTQFMAVLSAALQ 176
RRFR+A++A E E + +E GK +S +EK + DSN ITPGT FM +L+A+L+
Sbjct: 128 RRFRSAQEAKEKEEARKEALALWEAMGKKVSDEEKTKQAWDSNAITPGTPFMDLLAASLR 187
Query: 177 YFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDAD 236
Y++ ++N PGW+ +VI+SDA+V GEGEHKIM YIR QR+ PG+DPNT+H +YGLDAD
Sbjct: 188 YWVVQKMNTDPGWKNIQVIISDASVAGEGEHKIMDYIRRQRSNPGYDPNTKHVIYGLDAD 247
Query: 237 LIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTP 296
LIML+LATHE HF +LRE + + C +CGQ GH AA+C G + P
Sbjct: 248 LIMLALATHEPHFRVLREDVFAQDKSTACRICGQEGHYAAQCTGTKAE-----IEKKPPP 302
Query: 297 IHKKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEI 356
KK + FL++ VLREYL+ ELD+P+ PF + E+ +DD+V L FFVGNDFLPH+P+LEI
Sbjct: 303 PEKKPFIFLDVAVLREYLEVELDVPSSPFRFDLEKAIDDWVLLIFFVGNDFLPHLPSLEI 362
Query: 357 REGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYE 416
REGAI+ L+ ++++E MGGYL+D G + L R + ++ +A ED+IF++R ++
Sbjct: 363 REGAIDTLLKIWKQELPRMGGYLSDNGTLNLARAQIILEGLAKREDEIFRRRREAEERQA 422
Query: 417 YNEAMKLNARRESSEELLQAPVAVADTVKLGE 448
N RR+ + Q A ++KL E
Sbjct: 423 QNA-----KRRKLEQAHRQGGTGPAASLKLTE 449
Score = 211 bits (538), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 113/253 (44%), Positives = 151/253 (59%), Gaps = 7/253 (2%)
Query: 442 DTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFY 501
DTVKL EPGYKERYY KF + P +I+ + V YV+GL WV +YYYQ SWQW+Y
Sbjct: 641 DTVKLWEPGYKERYYKQKFGVE-PHDIE-FRHKVAEAYVQGLAWVLQYYYQGTPSWQWYY 698
Query: 502 PYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPI 561
PYH+APFA+D D+ ++I F LG+PF+P++QLMG PAAS +P ++ M D SPI
Sbjct: 699 PYHFAPFAADFVDVEKMDIKFNLGQPFKPYEQLMGVFPAASRKHIPAVFQKFMVDEDSPI 758
Query: 562 YKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLY 621
FYPP F+IDMNGK+ AWQGV LPFIDE LL LTE+E+ RN ++L+
Sbjct: 759 IDFYPPTFEIDMNGKKMAWQGVALLPFIDETRLLDAMALEYPNLTEDEVKRNQPGHNVLF 818
Query: 622 VHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVNASGGMNGYIWLCER--NGLRSIIPSP 679
+HP+Y Y LY + ++ ID S G++G + G P
Sbjct: 819 AADEHPVY---PFYEALYGKKMKKNADPVAIDTALSKGISGQVLPNPDCLPGSTYYCPLT 875
Query: 680 VKGLPDIERNQAM 692
GLPDI ++++
Sbjct: 876 TVGLPDIRNDRSL 888
>gi|157864164|ref|XP_001680795.1| putative 5'-3' exonuclease [Leishmania major strain Friedlin]
gi|68124087|emb|CAJ02069.1| putative 5'-3' exonuclease [Leishmania major strain Friedlin]
Length = 1490
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 237/630 (37%), Positives = 353/630 (56%), Gaps = 76/630 (12%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP F+RW A+R+P I + P VD NLYLD+NGII
Sbjct: 1 MGVPKFFRWAAERFPSIITPFKDSPPPVD---------------------NLYLDINGII 39
Query: 61 HPCFHPD----GKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQR 116
H C HP+ + +PT ++ +++F Y++ +F ++PRK LA+DGVAPRAKMNQQR
Sbjct: 40 HNCTHPNDVDATRRSPTE-KEMIQAMFVYLEKLFNAIQPRKYFLLAVDGVAPRAKMNQQR 98
Query: 117 TRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQ 176
RR+RA + A E + +E E+ + DSN ITPGT FM +S Q
Sbjct: 99 QRRYRAGYEMMIAREEALAMGEE---------VPEEKDVFDSNCITPGTPFMVRVSKEFQ 149
Query: 177 YFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDAD 236
YFI +L+ P WQ ++I S + PGEGEHKI+ +IR ++ P +DPN HC+YGLDAD
Sbjct: 150 YFITMKLSTDPAWQGCQIIFSGHDCPGEGEHKIVDFIRRRKMQPNYDPNETHCMYGLDAD 209
Query: 237 LIMLSLATHEIHFSILREVITL-PGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDT 295
L+ML+LATHE HF +LREV+ PG +++ + E G V D
Sbjct: 210 LVMLALATHEPHFVLLREVVAFGPGSRKE-----RERQEEDEAKGL----------VKDK 254
Query: 296 PIHKK-KYQFLNIWVLREYLQYE----LDIPNPPFPINFERIVDDFVFLCFFVGNDFLPH 350
HK ++ L+I V R+YLQ E L ++FER++DDFVF+CFF+GNDFLP
Sbjct: 255 AYHKADEFVLLHINVFRDYLQLEVKSYLAKAKSSVSVDFERVIDDFVFMCFFIGNDFLPT 314
Query: 351 MPTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTR 410
+PT+ I +G+I L+ +Y + YLT GE+ E ++ V E + ++R +
Sbjct: 315 LPTIGINDGSIPALLRIYVDNMLSKNKYLTHKGEIDWRSAEVWLNEVGKLEFETLRRRQQ 374
Query: 411 IQQAYEYNEAMKLNARRESSEELLQAPVAVADTVKLGEPGYKERYYADKFEI-----SNP 465
+ ++ N ARR+ + E+ V ++ +K+RYY +K ++
Sbjct: 375 EEAEFQKNR-----ARRDPTHEVDTTSVIPITSIL----EFKQRYYGEKHGFAGGWDASS 425
Query: 466 EEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDL--EITFF 523
E++ ++++ YVEGL WV YYYQ V SW+WF+P++YAP ASD+ +L + ++F
Sbjct: 426 EDMRRLRE----HYVEGLMWVMHYYYQGVPSWKWFFPHYYAPMASDMVNLPAIAANVSFE 481
Query: 524 LGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGV 583
LG+PF+P QL+ LP S ++P+ Y L+ PSSP+ K+ P ID G R W+G+
Sbjct: 482 LGKPFQPHQQLLAVLPPMSYLSMPKAYWPLLRSPSSPLAKYLPEHIVIDREGARAPWEGI 541
Query: 584 VKLPFIDEKLLLRQTKKLEVFLTEEELFRN 613
V +PFIDE+ LL + ++ ++ E+ N
Sbjct: 542 VLIPFIDERTLLAAYESVQKNVSPEDAANN 571
>gi|449018780|dbj|BAM82182.1| exonuclease [Cyanidioschyzon merolae strain 10D]
Length = 829
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 255/643 (39%), Positives = 345/643 (53%), Gaps = 88/643 (13%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MG+P F+RWL+ RYP+ I +E D EFDN YLDMNGII
Sbjct: 1 MGIPRFFRWLSLRYPV-INQSLEGD---------------------REFDNFYLDMNGII 38
Query: 61 HPCFHP-DGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRR 119
H C H DG ++F IF Y D ++ +V+PRK L+LA+DGVAPRAKMNQQR+RR
Sbjct: 39 HTCTHNNDGDIIFLDEVEMFARIFAYTDRLYRIVKPRKFLFLAVDGVAPRAKMNQQRSRR 98
Query: 120 FRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFI 179
FR+AK+A ER+ E G L + E DSN ITPGT FM LS A + +I
Sbjct: 99 FRSAKEA-------ERVLAEAIARGDLEDGFIE-ERFDSNCITPGTAFMDRLSQAFREWI 150
Query: 180 QARLNQIPGWQF-TKVILSDANVPGEGEHKIMSYIR--LQRNLPGFDPNTRHCLYGLDAD 236
++ WQ KV+ S VPGEGEHKIM IR +++ D RHC+YGLDAD
Sbjct: 151 DYKMRNDRAWQTGCKVVFSGPEVPGEGEHKIMEMIREIKRQHRHRGDMPIRHCMYGLDAD 210
Query: 237 LIMLSLATHEIHFSILREVITLPGQ-QEKCFVCGQVGHLAA----ECHGKPGDNP----- 286
LIML L THE +F++LRE + G+ E+ + + + + GDN
Sbjct: 211 LIMLGLVTHEPYFALLREKLVYRGRIGERLGAAARSPPITSLSNPAAASESGDNSPLARA 270
Query: 287 --ADWNGVDDTPIHK---KKYQFLNIWVLREYLQYEL-------DIPNPPFPINFERIVD 334
A G+ D P + +++ L I +LR+ L E PPF ++ ERIVD
Sbjct: 271 LAARRMGLVDAPANLDDFEEFHLLEINLLRDELYKEFAELASRQRSDAPPFHVDLERIVD 330
Query: 335 DFVFLCFFVGNDFLPHMPTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFI 394
DF+F+ VGNDFLPH+P L+I +GA+ LL Y+ MGGYLTD + DR+E F
Sbjct: 331 DFMFMGVLVGNDFLPHLPHLDISDGALELLFGAYKELLPIMGGYLTDKHRIHPDRLEAFA 390
Query: 395 QSVAVYEDQIFQKRTRIQQAYEYNEAMKLNARRESSEELLQAPVAVADTVKLGEPGYKER 454
+A E F +R + EY + + Y+
Sbjct: 391 ARLAEEERAYFNRRGVDENIQEYCDPER----------------------------YRVA 422
Query: 455 YYADKFEIS--NPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDL 512
YY DKF ++ P+ ++++ V+ Y+EGL WV +YY+ SW W+YPY++AP SDL
Sbjct: 423 YYRDKFRLNLDAPDGNERLRGQVIQSYLEGLHWVLQYYHHGCPSWTWYYPYYFAPLCSDL 482
Query: 513 KDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQID 572
+DL ++ F G+PF P QL+G LP SS LP YR LM D SP+ FYP +F+ D
Sbjct: 483 RDLGSYKVRFLKGKPFTPLTQLLGVLPPESSGELPPPYRQLMLDLESPVRDFYPAEFRTD 542
Query: 573 MNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVF--LTEEELFRN 613
+NGKRF W+ VV LPFI+E+ LL ++ LT EE R+
Sbjct: 543 LNGKRFDWEAVVLLPFIEERRLLEAVGSIDPHRELTSEERRRD 585
>gi|380484893|emb|CCF39710.1| XRN 5'-3' exonuclease [Colletotrichum higginsianum]
Length = 1015
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 201/422 (47%), Positives = 280/422 (66%), Gaps = 7/422 (1%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MG+PA +RWL+++YP I V+EE P +G PVD + PNPNG E DNLYLDMNGI+
Sbjct: 1 MGIPAAFRWLSNKYPKIISPVIEEQPVKMEDGSEIPVDTTGPNPNGEELDNLYLDMNGIV 60
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ +PAP +++ +F Y D + +VRPRKLL +A+DGVAPRAKMNQQR+RRF
Sbjct: 61 HPCSHPEDRPAPKDEEEMMLEVFKYTDRVVNMVRPRKLLMIAVDGVAPRAKMNQQRSRRF 120
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETC-----DSNVITPGTQFMAVLSAAL 175
R+A++A E E +++ L K ++ + + + E+ DSN ITPGT FM +L+A+L
Sbjct: 121 RSAQEAQEKEEDKQELLKLLKQQNGGVVSDDSLESVTKKAFDSNSITPGTPFMDILAASL 180
Query: 176 QYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDA 235
+Y+ +LN P W K+I+SDA VPGEGEHKIM+++R QR P FDPNTRH +YGLDA
Sbjct: 181 RYWCAYKLNTDPAWAKLKIIISDATVPGEGEHKIMNFVRSQRISPDFDPNTRHVIYGLDA 240
Query: 236 DLIMLSLATHEIHFSILREVITLPGQQEK-CFVCGQVGHLAAECHGKPGDNPADWNGVDD 294
DLIML LATHE HF +LRE + + + C +CGQ GH A C G+ + +++ +
Sbjct: 241 DLIMLGLATHEPHFRVLREDVFFQDSKARMCKLCGQKGHEARACRGQAKEKVGEFDEQEK 300
Query: 295 TPIHKKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTL 354
+ K + +L++ +LREYL EL++P PF + ER +DD+VF+C FVGNDFLPH+P L
Sbjct: 301 N-LALKPFIWLHVSILREYLAAELNVPGLPFRFDLERAIDDWVFMCCFVGNDFLPHLPAL 359
Query: 355 EIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQA 414
EIRE I+ L +++ MGGY+ G V L R + + +A ED IF++R +
Sbjct: 360 EIRENGIDTLTAIWKDNLPFMGGYVVKDGHVDLGRAQLILNGLAKQEDAIFKRRKETEDR 419
Query: 415 YE 416
E
Sbjct: 420 KE 421
Score = 179 bits (454), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 91/199 (45%), Positives = 120/199 (60%), Gaps = 3/199 (1%)
Query: 436 APVAVADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVC 495
A A D V++ E GY +RYY KF + + + + V YVEGL WV YY+Q
Sbjct: 552 AEEAAVDHVRMWEEGYADRYYEQKFHVDRSDH--EFRHKVARAYVEGLSWVLLYYFQGCP 609
Query: 496 SWQWFYPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMT 555
SW+W+YPYHYAPFA+D DL +E+ F G +PF+QLM +PAAS SALPE + +LM
Sbjct: 610 SWEWYYPYHYAPFAADFVDLDKMEVQFEKGRISKPFEQLMSVMPAASRSALPEVFHDLML 669
Query: 556 DPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSV 615
+ S + FYP +F+ID+NGK+ AWQGV LPFI+ LL +K L+ + RN V
Sbjct: 670 NEDSEVIDFYPTEFEIDLNGKKMAWQGVALLPFIEMPRLLAAVEKKYPLLSAADQARNGV 729
Query: 616 MLD-LLYVHPQHPLYQQIT 633
D LL H LY +IT
Sbjct: 730 GRDVLLLSDAHHELYDEIT 748
>gi|332029616|gb|EGI69505.1| 5'-3' exoribonuclease 1 [Acromyrmex echinatior]
Length = 1679
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 252/662 (38%), Positives = 360/662 (54%), Gaps = 111/662 (16%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP F+R++++RYP + +VV+E Q+ EFD LYLDMNGII
Sbjct: 1 MGVPKFFRYISERYPC-LSEVVKEH-QIP------------------EFDYLYLDMNGII 40
Query: 61 HPCFHP-DGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRR 119
H C HP D S + +FK+IF YI+ +F ++RP+KL ++AIDGVAPRAK+NQQR RR
Sbjct: 41 HTCSHPNDDVCFRISEEMIFKNIFHYIEVLFNMIRPQKLFFMAIDGVAPRAKINQQRGRR 100
Query: 120 FRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFI 179
FRAAKDA EA+ A + KEK DSN ITPGT FMA L L+ F+
Sbjct: 101 FRAAKDAEVQEAKAI--------AKGIPIPKEK--RFDSNCITPGTLFMAKLGEQLKCFV 150
Query: 180 QARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIM 239
+ +++ W+ K++ S + VPGEGEHKIM YIR + ++ ++ HCLYGLDADLIM
Sbjct: 151 EHKVSTDDAWKKCKILFSGSEVPGEGEHKIMDYIRYMKASKEYNSDSSHCLYGLDADLIM 210
Query: 240 LSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIHK 299
L L +HE +FS+LRE + QQ K TP +
Sbjct: 211 LGLCSHEPNFSLLREEVKFGKQQVKM-----------------------------TP-EE 240
Query: 300 KKYQFLNIWVLREYLQYELD-IPNP-PFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIR 357
K+ L++ +LREY+++E I + F + E+I+DD+V + F VGNDF+PH+P L I
Sbjct: 241 TKFCLLHLSLLREYIEHEFSPIKDKLSFSFDIEKIIDDWVLMGFLVGNDFIPHLPNLHIA 300
Query: 358 EGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVA---------VYED-QIFQK 407
GA+ +L Y + GY+ +AG + LDR EKF++ ++ Y D + F+
Sbjct: 301 NGALPILYRAYMEVLPTLEGYINEAGTLNLDRFEKFMERLSRLDVEQFNEQYADIKFFES 360
Query: 408 RT------RIQQAYEYNEAMKLNARRESSEELLQAPVAVADTVKLGE------------- 448
+T + Y+ E + + +++ + L A + + LG
Sbjct: 361 KTGRRPNESERHIYKKTEDNESASPKKTQNKDLDALIKSTREMSLGNFDDDDIFIEYRNM 420
Query: 449 -----------------PGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYY 491
+K+ YY +K E N +E +V + YV + W YYY
Sbjct: 421 DLIVDDESDSEIYNMEFVQHKKDYYMNKLEYENVDE--EVLRSQAEGYVRAIQWNLHYYY 478
Query: 492 QDVCSWQWFYPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYR 551
CSW W+YP+HYAP+ SD+KD DL++ F LG+PF PF QL+ LPA S LP ++
Sbjct: 479 HGCCSWSWYYPHHYAPYISDIKDFKDLKLEFDLGQPFLPFQQLLAVLPAFSKDLLPMAFQ 538
Query: 552 NLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELF 611
+L+T+ +SPI +YP +F+ D+NGKR W+ VV +PFIDEKLLL + LT EE
Sbjct: 539 SLLTEETSPIINYYPHNFKTDLNGKRQEWEAVVLIPFIDEKLLLAAMQPHLSRLTLEEQA 598
Query: 612 RN 613
RN
Sbjct: 599 RN 600
>gi|72391638|ref|XP_846113.1| 5'-3' exonuclease XRNA [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|62175631|gb|AAX69763.1| 5'-3' exonuclease XRNA, putative [Trypanosoma brucei]
gi|70802649|gb|AAZ12554.1| 5'-3' exonuclease XRNA, putative [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
Length = 1418
Score = 413 bits (1062), Expect = e-112, Method: Compositional matrix adjust.
Identities = 245/635 (38%), Positives = 352/635 (55%), Gaps = 65/635 (10%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP F+RW+A+RYP I + P VD NLYLDMNGII
Sbjct: 1 MGVPKFFRWVAERYPSVITPFRDFPPPVD---------------------NLYLDMNGII 39
Query: 61 HPCFHPD----GKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQR 116
H C HP+ APT + +++F Y++ +F ++PRK +LA+DGVAPRAKMNQQR
Sbjct: 40 HNCTHPNDADATHKAPTE-KAMVEAMFSYLEKLFNAIQPRKCFFLAVDGVAPRAKMNQQR 98
Query: 117 TRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQ 176
RR+R+ + A R+E G+ L E+ + DSN ITPGT FM +S Q
Sbjct: 99 QRRYRSGYEMMVA-------REEALSRGEELP--EEADVFDSNCITPGTDFMVRISEHFQ 149
Query: 177 YFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDAD 236
YFI +++ P WQ VI S + PGEGEHKI+ +IR ++ P + PN HC+YGLDAD
Sbjct: 150 YFIMMKMSTDPAWQNCSVIYSGHDHPGEGEHKIVEFIRRRKMQPDYGPNETHCMYGLDAD 209
Query: 237 LIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTP 296
L+ML+LATHE HF +LREV+T F GQ A E + + +D D +
Sbjct: 210 LVMLALATHEPHFVLLREVVT--------FGFGQESRRAREQREQ---DESDGIVADKSY 258
Query: 297 IHKKKYQFLNIWVLREYLQYEL-DIPNPPFPINF--ERIVDDFVFLCFFVGNDFLPHMPT 353
++ ++ VLR+YL E+ + P N+ ER+VDDFV +CFF+GNDFLP +PT
Sbjct: 259 QKPDEFVLFHVNVLRDYLDLEVRERLGDKLPTNYDLERVVDDFVLMCFFIGNDFLPSIPT 318
Query: 354 LEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQ 413
L I +G++ ++ +Y + YLTD G + VE ++Q +A E + R +Q
Sbjct: 319 LGIHDGSLVQMLDLYAQRVLLAHTYLTDMGRIDWRAVEGWLQGLADLEFTTIKAREAQEQ 378
Query: 414 AYEYNEAMKLNARRESSEELLQAPVAVADTVKLGEPGYKERYYADKFEIS---NPEEIDK 470
Y+ A + R A ++ + L E YK+RYY DK + + +P+ D
Sbjct: 379 EYQRRMAQQCGEHR-------AATISTSTVESLRE--YKDRYYRDKHQFAMGWDPQGEDM 429
Query: 471 VKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDLE--ITFFLGEPF 528
K + L Y+EG+ WV YYYQ SW+W++P+HYAP ASDL +L + + F G+PF
Sbjct: 430 AK--LRLHYIEGIMWVIGYYYQGPPSWKWYFPHHYAPMASDLVNLPAVAACVKFDPGKPF 487
Query: 529 RPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPF 588
P QL+ LP S ++P Y L+ +SP+ +++P QID G R W+GVV +PF
Sbjct: 488 LPHQQLLAVLPPMSYRSMPRAYWPLLRSKNSPLARYFPEKLQIDREGTRAPWEGVVLIPF 547
Query: 589 IDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVH 623
I+E+ LL + ++ +T EE N + L LY +
Sbjct: 548 IEERTLLAAYETVQDRVTPEERKNNRLGLPTLYAY 582
>gi|261329673|emb|CBH12655.1| 5'-3' exonuclease XRNA, putative [Trypanosoma brucei gambiense
DAL972]
Length = 1418
Score = 413 bits (1062), Expect = e-112, Method: Compositional matrix adjust.
Identities = 245/635 (38%), Positives = 352/635 (55%), Gaps = 65/635 (10%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP F+RW+A+RYP I + P VD NLYLDMNGII
Sbjct: 1 MGVPKFFRWVAERYPSVITPFRDFPPPVD---------------------NLYLDMNGII 39
Query: 61 HPCFHPD----GKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQR 116
H C HP+ APT + +++F Y++ +F ++PRK +LA+DGVAPRAKMNQQR
Sbjct: 40 HNCTHPNDADATHKAPTE-KAMVEAMFSYLEKLFNAIQPRKCFFLAVDGVAPRAKMNQQR 98
Query: 117 TRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQ 176
RR+R+ + A R+E G+ L E+ + DSN ITPGT FM +S Q
Sbjct: 99 QRRYRSGYEMMVA-------REEALSRGEEL--PEEADVFDSNCITPGTDFMVRISEHFQ 149
Query: 177 YFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDAD 236
YFI +++ P WQ VI S + PGEGEHKI+ +IR ++ P + PN HC+YGLDAD
Sbjct: 150 YFIMMKMSTDPAWQNCSVIYSGHDHPGEGEHKIVEFIRRRKMQPDYGPNETHCMYGLDAD 209
Query: 237 LIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTP 296
L+ML+LATHE HF +LREV+T F GQ A E + + +D D +
Sbjct: 210 LVMLALATHEPHFVLLREVVT--------FGFGQESRRAREQREQ---DESDGIVADKSY 258
Query: 297 IHKKKYQFLNIWVLREYLQYEL-DIPNPPFPINF--ERIVDDFVFLCFFVGNDFLPHMPT 353
++ ++ VLR+YL E+ + P N+ ER+VDDFV +CFF+GNDFLP +PT
Sbjct: 259 QKPDEFVLFHVNVLRDYLDLEVRERLGDKLPTNYDLERVVDDFVLMCFFIGNDFLPSIPT 318
Query: 354 LEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQ 413
L I +G++ ++ +Y + YLTD G + VE ++Q +A E + R +Q
Sbjct: 319 LGIHDGSLVQMLDLYAQRVLLAHTYLTDMGRIDWRAVEGWLQGLADLEFTTIKAREAQEQ 378
Query: 414 AYEYNEAMKLNARRESSEELLQAPVAVADTVKLGEPGYKERYYADKFEIS---NPEEIDK 470
Y+ A + R A ++ + L E YK+RYY DK + + +P+ D
Sbjct: 379 EYQRRMAQQCGEHRA-------ATISTSTVESLRE--YKDRYYRDKHQFAMGWDPQGEDM 429
Query: 471 VKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDLE--ITFFLGEPF 528
K + L Y+EG+ WV YYYQ SW+W++P+HYAP ASDL +L + + F G+PF
Sbjct: 430 AK--LRLHYIEGIMWVIGYYYQGPPSWKWYFPHHYAPMASDLVNLPAVAACVKFDPGKPF 487
Query: 529 RPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPF 588
P QL+ LP S ++P Y L+ +SP+ +++P QID G R W+GVV +PF
Sbjct: 488 LPHQQLLAVLPPMSYRSMPRAYWPLLRSKNSPLARYFPEKLQIDREGTRAPWEGVVLIPF 547
Query: 589 IDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVH 623
I+E+ LL + ++ +T EE N + L LY +
Sbjct: 548 IEERTLLAAYETVQDRVTPEERENNRLGLPTLYAY 582
>gi|313230942|emb|CBY18940.1| unnamed protein product [Oikopleura dioica]
Length = 1623
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 245/641 (38%), Positives = 349/641 (54%), Gaps = 96/641 (14%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP FYR++++RYP + V++E Q+ EFDNLYLDMNGII
Sbjct: 1 MGVPKFYRYMSERYPC-LSQVIKEH-QIP------------------EFDNLYLDMNGII 40
Query: 61 HPCFHP-DGKPA-PTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
HPC HP D P + + +FK IF YI+ +F ++RPRK+ ++A+DGVAPRAKMNQQR+R
Sbjct: 41 HPCSHPNDDDPHFRITEEQIFKDIFHYIECLFRIIRPRKVFFMAVDGVAPRAKMNQQRSR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RFR+AK+A E E ++ +E G+ L + K DSNVITPGT FM L L+YF
Sbjct: 101 RFRSAKEAEENE-------RKAKEKGESLPTEGK---FDSNVITPGTGFMVRLDKQLRYF 150
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
IQ ++ W+ V LS PGEGEHKIM YIR QR L DP TRHCLYGLDADLI
Sbjct: 151 IQNKITHDDAWRGITVFLSGHETPGEGEHKIMEYIRYQRTLSDHDPRTRHCLYGLDADLI 210
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
ML LATHE +FS+LRE I ++K + + + +A +P D
Sbjct: 211 MLGLATHEPNFSLLREEIQFTKAKDKMIIVF-IPYRSAGRQNRPED-------------- 255
Query: 299 KKKYQFLNIWVLREYLQYEL-----------DIPNPPFPINFERIVDDFVFLCFFVGNDF 347
+ L++ V+R+Y+ +E + + ER++DD+V + F VGNDF
Sbjct: 256 -ITFHLLHLSVMRDYIHHEFKDLRTSLASRKSSGDIEIEYDLERLIDDWVLMGFLVGNDF 314
Query: 348 LPHMPTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQ- 406
+PH+P ++I++ + +L Y + +G YLT+ G++ LD +E+F ++ E + F+
Sbjct: 315 VPHLPNMQIKQDHLPVLYKSYSKVVPKLGKYLTERGKIDLDVLEEFFFVLSENEREQFEN 374
Query: 407 ---------------KRTRIQQAYEYNEAMKLNARRESSEEL----------------LQ 435
K + ++A ++E L +E + L
Sbjct: 375 SQADDKYLAGKRSMMKESHGKKAAAHDELEALALEQEEDGKFDGDIAQGDLIPIDPRELS 434
Query: 436 APVAVADTVKLGE-PGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDV 494
V D V E Y+ YY KF +E K+ +YV L W+ YYY V
Sbjct: 435 TDFGVWDDVTKQEFVDYRNGYYHSKFNKRLTKEFQYTMKN---EYVRALQWIMHYYYNGV 491
Query: 495 CSWQWFYPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSS-ALPEKYRNL 553
SW W++P+HY+PF SD+ L + + + G+PF PF+QL+ LPA+S ALPE + +L
Sbjct: 492 QSWGWYFPFHYSPFLSDMVKLKECNLKYDYGKPFLPFEQLLAVLPASSGKVALPEVFHSL 551
Query: 554 MTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLL 594
M P+S I FYP +F+ D+NGK W+ VV +PFIDE L
Sbjct: 552 MDSPTSSIIDFYPTEFETDLNGKMQDWEAVVLIPFIDENRL 592
>gi|213407328|ref|XP_002174435.1| 5'-3' exoribonuclease [Schizosaccharomyces japonicus yFS275]
gi|212002482|gb|EEB08142.1| 5'-3' exoribonuclease [Schizosaccharomyces japonicus yFS275]
Length = 1322
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 262/724 (36%), Positives = 374/724 (51%), Gaps = 163/724 (22%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MG+P F+RW+++RYPL +V++D EFDNLYLDMNGI+
Sbjct: 1 MGIPKFFRWMSERYPL-CSQLVQDD-------------------RIPEFDNLYLDMNGIL 40
Query: 61 HPCFHP--DGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C H D A D ++ +IF+YI+H+F ++P+KLLY+A+DG APRAKMNQQR+R
Sbjct: 41 HNCTHKNDDHSSAALPEDQMYIAIFNYIEHLFQKIKPKKLLYMAVDGCAPRAKMNQQRSR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RFR AKDA +A R++ E G++++ E P DSN ITPGT FM +S L YF
Sbjct: 101 RFRTAKDAYDA-------RRKAERNGEVIA--EDP--FDSNCITPGTVFMQRISEQLHYF 149
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
IQ ++++ W ++ILS + PGEGEHKIM YIR Q+ P ++PNTRHCLYGLDADLI
Sbjct: 150 IQKKVSEDSDWSGVQIILSGHDCPGEGEHKIMEYIRTQKAQPNYNPNTRHCLYGLDADLI 209
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
ML L +H+ HF +LRE +T PA + + +
Sbjct: 210 MLGLLSHDPHFCLLREEVTF--------------------------GPARKSASKE--LA 241
Query: 299 KKKYQFLNIWVLREYLQYELD--IPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEI 356
+K+ L++ +LREYL+ E + N PF + ERI+DDF+ L FFVGNDFLP++P L I
Sbjct: 242 NQKFYLLHLSLLREYLEAEFEECRDNLPFAYDLERIIDDFILLAFFVGNDFLPNLPGLHI 301
Query: 357 REGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQ--- 413
EGA+ L+ +VY+ M GY+ +AG + +DR++ + + +E +F++
Sbjct: 302 NEGALALMFNVYKSVLPLMEGYINEAGVINMDRLDLVLLELEKFEKAVFKEECYSSNADG 361
Query: 414 ---AYEYNEAMKLNAR----------------------RE---------SSEE------- 432
A+++N+ ++ N + RE SSE+
Sbjct: 362 EAPAFDFNQFLRNNNKDPSYLTVKQKELYCLLKKFLYSREQYLDITDKLSSEDTRFLRRL 421
Query: 433 -----LLQAPVAVADTVKLGEPGYKERYYA----------------DKFEISNPEEIDKV 471
L+ + V AD +K ++ +KF+ N ID
Sbjct: 422 ASKLGLMASTVVFADGSSCLRVAFKNLNFSDSEEDDEEQDEIGEVLEKFDKLNI--IDNT 479
Query: 472 KKDVVLKYVEGL-CWVCRYY--------------------YQDVCSWQWFYPY------- 503
KD K+ +G W YY Y + W FY Y
Sbjct: 480 TKDSEEKFEKGFEMWKDNYYRSKVGFSYYDEKELEQMAKRYVEGLQWVLFYYYRGCQSWG 539
Query: 504 -----HYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPS 558
HY+P SD++ ITF +G+PFRPF+QLM LPA S S +P YR+LMTDP+
Sbjct: 540 WFYDYHYSPKISDVRRGLRFGITFDMGKPFRPFEQLMAVLPARSKSLVPPCYRDLMTDPN 599
Query: 559 SPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLD 618
SPI FYP +F++D N K+ +W+ VVK+PFI+E L K E LT EL RN
Sbjct: 600 SPIIDFYPENFELDQNEKKASWEAVVKIPFIEETRLQDALKSREHLLTAAELHRNEFHPP 659
Query: 619 LLYV 622
+L++
Sbjct: 660 VLFI 663
>gi|209877046|ref|XP_002139965.1| 5'-3' exoribonuclease [Cryptosporidium muris RN66]
gi|209555571|gb|EEA05616.1| 5'-3' exoribonuclease, putative [Cryptosporidium muris RN66]
Length = 1148
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 271/781 (34%), Positives = 379/781 (48%), Gaps = 168/781 (21%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP FY+WL RYPL + + E + + V +D++ P+ NG EFD LYLDMNGII
Sbjct: 1 MGVPTFYKWLCSRYPLIVRSLKE---SITEDNVNSKIDLTLPSENG-EFDCLYLDMNGII 56
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC +P AP + ++F + DYID +F ++RPR+LLYLAIDGVAPRAKMNQQR+RR+
Sbjct: 57 HPCCNPISSIAPINEAEMFTRVCDYIDRLFSMIRPRRLLYLAIDGVAPRAKMNQQRSRRY 116
Query: 121 RAAKDAAEAEAEEERLRKEFEEAG-KLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFI 179
+ + + ++EFE+ G K KEK DSN+ITPGT FM LSA LQ +I
Sbjct: 117 KTSMEIENLMQAYSEAKQEFEKLGYKCPPYKEK---WDSNLITPGTPFMERLSACLQVYI 173
Query: 180 QARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIM 239
+ + P W+ VI SDAN+PGEGEHKI+ +IR QR +DPNTRH LYG DADLIM
Sbjct: 174 RQKYESEPAWKTLSVIFSDANIPGEGEHKILDFIRKQRCNSNYDPNTRHVLYGADADLIM 233
Query: 240 LSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADW-----NGVDD 294
L L+THE +F I+RE IT + +C L E N + N +
Sbjct: 234 LGLSTHEQNFFIVRESITNDDGASQ--ICHLYNKLLTENSIDKSVNANNRIRFGPNNSSN 291
Query: 295 TPIHK--KKYQFLNIWVLREYLQYEL---------------------------------- 318
I+ K + +++ VLREYL YE
Sbjct: 292 LRIYSWWKDLEMIDLSVLREYLAYEFKELEEKLSINREKYIENSNNPECTISTEIHEQDN 351
Query: 319 ---------DIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHVYR 369
+ N F + ER +DDFVFLCFFVGNDFLP++P I +G+++ L+ +Y
Sbjct: 352 NMKYSKINEKLYNSKFYYDLERCIDDFVFLCFFVGNDFLPNLPAFGIHKGSLDQLLAIYI 411
Query: 370 REFTAMGGYLTDAGEVLLDRVEKF------IQSVAVYEDQIFQKRTRIQQAYEYN----- 418
+ +G Y+T G + + + F ++ + ED F R I + +
Sbjct: 412 KVLPTLGDYITWEGNINVKSIGLFFFYLKDLELDVLKEDTRFNNRNNISNKDQKDIFSKP 471
Query: 419 ----EAMKLNAR----RESSEELLQ-----APVAVADTVKLGEPG---YKERYYADKFE- 461
+K N + +LQ + D V+LG+ ++ RYY+ KF+
Sbjct: 472 KIDVNKVKFNGIDAYFNDHVNRILQFKDNNCETYMTDKVRLGDGDVDIWRLRYYSIKFKL 531
Query: 462 ---------------ISNPEEIDK-------------VKKDVVLKYVEGLCWVCRYYYQD 493
I N +IDK ++V Y+ GL WV +YYY
Sbjct: 532 DLLVLNLKDINQDETIENNLDIDKETIDNNLYQKLSEFSREVGYHYIRGLSWVLKYYYHG 591
Query: 494 VCSWQWFYPYHYAPFASDLKDL--SDL--------------------------------E 519
V SW WFYPYHYAP DL ++ SDL E
Sbjct: 592 VPSWDWFYPYHYAPLVVDLANMAASDLRKIGIKDVSIPDTIIKSVNICDGDSNNICNENE 651
Query: 520 IT-----------------FFLGEPFRPFDQLMGTLPAASS-SALPEKYRNLMTDPSSPI 561
++ F G PF P+ QLM LP S LP K +M+D SP+
Sbjct: 652 LSVNSNTFNFSIENAILAPFSQGVPFSPYQQLMAVLPPNSGKKCLPFKLYQMMSDEKSPL 711
Query: 562 YKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLY 621
+FYP F+ D NG + W+ +V LPFI+++ LL K LEV +++ + RN ++++Y
Sbjct: 712 KEFYPDKFKEDPNGNKQRWKWIVLLPFINQEKLLEHVKPLEVHISDIDKIRNRHGMNIIY 771
Query: 622 V 622
Sbjct: 772 T 772
>gi|412993039|emb|CCO16572.1| 5'-3' exoribonuclease [Bathycoccus prasinos]
Length = 1513
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 247/584 (42%), Positives = 330/584 (56%), Gaps = 82/584 (14%)
Query: 56 MNGIIHPCFHPDGKPAPT--SYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMN 113
MNG+IH C H G T + +++ +F Y+DHI+ +VRP+KLLY+AIDGVAPRAKMN
Sbjct: 1 MNGVIHNCSHGAGTDTNTRMTEEEMMAKVFAYLDHIYRMVRPKKLLYMAIDGVAPRAKMN 60
Query: 114 QQRTRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSA 173
QQR+RRFR+AK AE E + E E G E DSN ITPGT+FMA L+
Sbjct: 61 QQRSRRFRSAK-EAEEAKAEALAKGEPEAQG---------EPFDSNCITPGTEFMARLTE 110
Query: 174 ALQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGL 233
L+++++ + + W+ KVILS V GEGEHKIM YIR +R P +D N HCLYGL
Sbjct: 111 HLKFYVRKKQTEDVAWRNVKVILSGHEVRGEGEHKIMEYIRWERLKPDYDANMSHCLYGL 170
Query: 234 DADLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVD 293
DADLIML+L THE HF +LREV+ G G+ G + E +P D+
Sbjct: 171 DADLIMLALVTHEPHFCLLREVVKFGG--------GERGQPSREILERPSDD-------- 214
Query: 294 DTPIHKKKYQFLNIWVLREYLQYELDIPNP---PFPINFERIVDDFVFLCFFVGNDFLPH 350
+ L + +LREYL E F + ER++DD VFLC VGNDFLP
Sbjct: 215 -------GFLMLQVGLLREYLDLEFQRSVKGACGFAYDVERVIDDIVFLCMLVGNDFLPP 267
Query: 351 MPTLEIREGAINLLMHVYRREFTAMGGYLT---DAGEVLLDRVEKFIQSVAVYEDQIFQK 407
+PTL+I EGA+N L YR ++GGY++ G R+EK + +A +E + ++
Sbjct: 268 LPTLDIAEGALNTLFDTYRDMLPSLGGYISGDEGGGTFNAPRLEKILTRMAGFERDVLEQ 327
Query: 408 RTRI------QQAYEYNEAMKLNARRESSE-------------ELLQAP---------VA 439
R +QA N+ K N SE ELL+A ++
Sbjct: 328 RAMDVQEFDEKQAKRNNKNGKRNGHPSDSESFTDLTAMEQFEAELLKAKEEGKPEPTMMS 387
Query: 440 VADTVKLGEPG------YKERYYADKFEISNPEE--IDKVKKDVVLKYVEGLCWVCRYYY 491
VA + E G YK+ YY +K E+ E+ +D++++ Y EGL WV RYYY
Sbjct: 388 VAKRNAILEGGADGLQQYKDMYYREKLELKVGEKAPVDELRQ----AYFEGLNWVLRYYY 443
Query: 492 QDVCSWQWFYPYHYAPFASDL-KDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKY 550
+ V SW W+YPYHYAP ASDL L L + F G PF PF+QLM P ASS LPE +
Sbjct: 444 RGVASWTWYYPYHYAPMASDLCAGLGQLTVKFNYGRPFYPFEQLMAVQPPASSHLLPELF 503
Query: 551 RNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLL 594
R+ MT+ SSP+ F+P + +ID GKR +W+GVV LPF+DEK+L
Sbjct: 504 RHFMTEESSPLKPFFPDEIKIDFEGKRNSWEGVVLLPFLDEKVL 547
>gi|330916061|ref|XP_003297277.1| hypothetical protein PTT_07622 [Pyrenophora teres f. teres 0-1]
gi|311330133|gb|EFQ94619.1| hypothetical protein PTT_07622 [Pyrenophora teres f. teres 0-1]
Length = 883
Score = 410 bits (1054), Expect = e-111, Method: Compositional matrix adjust.
Identities = 223/470 (47%), Positives = 293/470 (62%), Gaps = 33/470 (7%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPA +RWL+ +YP + V EE P+ G+ V PVD + PNPNG EFDNLYLDMNGI+
Sbjct: 1 MGVPAMFRWLSQKYPKIVSTVQEELPKKVGDAVI-PVDRTGPNPNGEEFDNLYLDMNGIV 59
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ KPAP + D+ +IF+Y D + +VRPRKLLY+A+DGVAPRAKMNQQR+RRF
Sbjct: 60 HPCSHPEDKPAPKTEADMMMAIFEYTDRVVGMVRPRKLLYMAVDGVAPRAKMNQQRSRRF 119
Query: 121 RAAKDAAEAEAEEERLRK--------EFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLS 172
RAA++A E + E +K E+ L EK T DSN ITPGT FM +L+
Sbjct: 120 RAAREAKEKDEERAEFQKILNSQKASRGEDIDTLEEVMEK--TWDSNAITPGTPFMHLLA 177
Query: 173 AALQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYG 232
+LQY+ + P W+ KVI+SDA+VPGEGEHKIM++IR QR +P DPNT H +YG
Sbjct: 178 ESLQYWCAYKFTTDPSWKDMKVIISDASVPGEGEHKIMNFIRSQRAMPTHDPNTSHVIYG 237
Query: 233 LDADLIMLSLATHEIHFSILRE-VITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNG 291
LDADLIMLSLATHE HF +LRE V G+ + C CG+ GH+ C + P D
Sbjct: 238 LDADLIMLSLATHEPHFKVLREDVFYDSGKDKVCTRCGRKGHIRTNC-----EFPEDEKK 292
Query: 292 VDD--------TPIHK-KKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFF 342
+ + T H+ K Y +L+ VLREYL E+D P F + ER +DD+VF+CFF
Sbjct: 293 LTEEEAAEEWATSEHQLKPYIWLHTNVLREYLAVEMDTPKRTFKYDLERSLDDWVFMCFF 352
Query: 343 VGNDFLPHMPTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYED 402
VGNDFLPH+P+LEIR+ I+LL+ ++R M Y+T G + RV++ + ++A E
Sbjct: 353 VGNDFLPHLPSLEIRDQGIDLLISIWRDLAAEMDDYVTKDGYPDMRRVQQIMSALATREA 412
Query: 403 QIFQKRTRIQQAYEYNEAMKLNARRESSEELLQAPVAVADTVKLGEPGYK 452
IF+KR + N ARRE+ + D V PG+K
Sbjct: 413 GIFKKRKEVSDRQAAN-----RARREAQSNAHKRQRTDNDGV--SAPGFK 455
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 100/219 (45%), Positives = 131/219 (59%), Gaps = 8/219 (3%)
Query: 442 DTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFY 501
DT+ L E GY+ERYY KF ++ P +I + V +Y EGLCWV YY Q SW W++
Sbjct: 586 DTIMLWEDGYEERYYEQKFHVA-PNDI-AFRNKVARQYAEGLCWVLAYYMQGCPSWTWYF 643
Query: 502 PYHYAPFASDLKDLSDLE--ITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSS 559
P+HYAPFA+D L D++ F G PF P++QLMG LPAAS+ A+PE +R LM DP+S
Sbjct: 644 PHHYAPFAADFVGLEDMDPRKLFEKGVPFHPYEQLMGVLPAASNHAIPEPFRVLMEDPNS 703
Query: 560 PIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDL 619
I FYP DF ID+NGK+FAWQGV LPFIDEK LL L+++E RN +
Sbjct: 704 SIVDFYPEDFPIDLNGKKFAWQGVAVLPFIDEKRLLEAMGTKYPELSDDERKRNEFGKET 763
Query: 620 LYVHPQHPLYQQI--TLY--CQLYHQLPPQDRFAWEIDV 654
L + L+ + LY Q H++ P A D+
Sbjct: 764 LMFSQESGLFDDVEKALYRKGQQKHKIDPAKSRALHGDI 802
>gi|336271881|ref|XP_003350698.1| hypothetical protein SMAC_02370 [Sordaria macrospora k-hell]
gi|380094860|emb|CCC07362.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 955
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 207/423 (48%), Positives = 275/423 (65%), Gaps = 18/423 (4%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MG+PA +RWL+ +YP I VVE+ P +G PVD +KPNPNG EFDNLYLDMNG
Sbjct: 1 MGIPAAFRWLSTKYPKIISPVVEDQPITMPDGTVIPVDCTKPNPNGEEFDNLYLDMNG-- 58
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
PAP +++ +F Y D + +VRPRKLL +A+DGVAPRAKMNQQR+RRF
Sbjct: 59 --------PPAPKDEEEMMVEVFKYTDRVVNMVRPRKLLMIAVDGVAPRAKMNQQRSRRF 110
Query: 121 RAAKDAAEAEAEEERLRKEFE-EAGKLLSAKEKPETC-----DSNVITPGTQFMAVLSAA 174
RAA++A E E ++++ + + + G ++ +E ET DSN ITPGT FM +L+A+
Sbjct: 111 RAAREAMEKEEDKQKFVELLKKQNGNMIQQEEPVETVVKKAFDSNSITPGTPFMDILAAS 170
Query: 175 LQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLD 234
L+Y+ +LN P W KVI+SDA VPGEGEHKIM ++R QR P DPNTRH +YGLD
Sbjct: 171 LKYWCSYKLNTDPAWANMKVIISDATVPGEGEHKIMEFVRSQRGSPNHDPNTRHVIYGLD 230
Query: 235 ADLIMLSLATHEIHFSILRE-VITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVD 293
ADLIML LATHE HF +LRE V + C +CGQ GH A C G+ + +++
Sbjct: 231 ADLIMLGLATHEPHFRVLREDVFAQDSRPRLCKICGQKGHDAMNCKGEAKEKNGEFDE-K 289
Query: 294 DTPIHKKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPT 353
D I K + +L++ +LREYL ELD+P PF N ER +DD+VF+CFFVGNDFLPH+P
Sbjct: 290 DAVIPLKPFIWLHVSILREYLAIELDVPGLPFQFNLERAIDDWVFMCFFVGNDFLPHLPA 349
Query: 354 LEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQ 413
LEIRE I+ L +++ MGGYLT G+ L+RV+ + +A ED IF++R +
Sbjct: 350 LEIRENGIDTLTAIWKDNLPVMGGYLTKDGQADLERVQYIMAGLAKQEDAIFRRRKEAED 409
Query: 414 AYE 416
E
Sbjct: 410 RRE 412
Score = 192 bits (489), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 103/224 (45%), Positives = 136/224 (60%), Gaps = 7/224 (3%)
Query: 442 DTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFY 501
D+V+L E GY +RYY KF++ ++ID + V Y EGL WV YY+Q SW+WFY
Sbjct: 571 DSVRLWEEGYADRYYEQKFKVDR-KDID-FRHKVGRAYAEGLAWVLEYYFQGCPSWEWFY 628
Query: 502 PYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPI 561
PYHYAPFA+D DL +EI F G RPF+QLM LPAAS A+PE + LMT+ +S I
Sbjct: 629 PYHYAPFAADFVDLGKMEIKFEKGRISRPFEQLMSVLPAASRHAIPEVFHPLMTEENSEI 688
Query: 562 YKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLY 621
FYP +F+ID+NGK+ AWQGV LPFID LL + L+ E+ RN+ D L
Sbjct: 689 IDFYPEEFEIDLNGKKMAWQGVALLPFIDMPRLLSAMETKTHLLSPEDQLRNTPGKDFLL 748
Query: 622 VHPQHP-LYQQITLYCQLYHQLPPQDRFAWEIDVNASGGMNGYI 664
+ HP LY+ IT Q Y + +F E+D S G++G +
Sbjct: 749 LSDSHPTLYEHIT--SQFYSKKQGATKF--ELDPTKSAGLSGSV 788
>gi|298713655|emb|CBJ33698.1| putative 5\'-3\' exoribonuclease (XRN3) [Ectocarpus siliculosus]
Length = 708
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 219/429 (51%), Positives = 290/429 (67%), Gaps = 28/429 (6%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPAFYRWL+++YP +VD++E D EG P+D++ NPNG+EFDNLY+DMNGII
Sbjct: 1 MGVPAFYRWLSEKYPKIVVDMLE-DHAARVEGTEIPLDLTAENPNGIEFDNLYIDMNGII 59
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ KP P S ++++K+I DYID +F VRPR+LLYLAIDGVAPRAKMNQQR+RRF
Sbjct: 60 HPCSHPEDKPPPESEEEMYKNIMDYIDRLFSAVRPRRLLYLAIDGVAPRAKMNQQRSRRF 119
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQ 180
R+A++A EA E R+ +E G + K KP DSN+ITPGT+FM LS L++++Q
Sbjct: 120 RSAQEAEEAAELMEETRQAMKEMGVKVPPKAKP-AWDSNIITPGTEFMHKLSRYLRFYVQ 178
Query: 181 ARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
R+N+ WQ KVILSDA+ PGEGEHKIM ++R QR PG+DPN H L+GLDADLIML
Sbjct: 179 DRVNRDKAWQNIKVILSDASEPGEGEHKIMDFVRRQRTQPGYDPNQHHILHGLDADLIML 238
Query: 241 SLATHEIHFSILREVITLPGQQEKC------------FVCGQVGHLAAECHGKPGDNPAD 288
LATHE F+ILRE + QQ++ VG A G+ G++ D
Sbjct: 239 GLATHERSFTILREQVLFGRQQKEASERKAAAMNAARDALAGVGQKAK--RGEHGEHDGD 296
Query: 289 WNGVDDTPIHKKKYQFLNIWVLREYLQ---YELDIPNP-PFPINFERIVDDFVFLCFFVG 344
+ K Q L +W LREYL+ EL+ P PF +FER+VDDFVFLCFFVG
Sbjct: 297 VS-------PHKPLQMLQLWTLREYLENEFKELEAPGRVPFGYDFERVVDDFVFLCFFVG 349
Query: 345 NDFLPHMPTLEIREGAINLLMHVYRREFTAMGGYLT-DAGEVLLDRVEKFIQSVAVYEDQ 403
NDFLPH+P+L IR+GA++ L +VY+R +++G YLT G V L +V+ + V ED+
Sbjct: 350 NDFLPHLPSLGIRDGALDYLFNVYKRVISSLGDYLTASGGRVNLKQVDVIMSEVGEIEDE 409
Query: 404 IFQKRTRIQ 412
+F++R + +
Sbjct: 410 VFKRRKQAE 418
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 41/80 (51%), Positives = 55/80 (68%), Gaps = 1/80 (1%)
Query: 433 LLQAPVAVADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQ 492
L +A +V DTV+L E G+K+RYY DK ++ + E ++ + YVEGLCWV YYYQ
Sbjct: 625 LDEARDSVNDTVRLWEDGWKDRYYHDKCKLEDIEG-GGGRERLFQTYVEGLCWVMLYYYQ 683
Query: 493 DVCSWQWFYPYHYAPFASDL 512
SW W++P+HYAPFASDL
Sbjct: 684 GCPSWTWYFPFHYAPFASDL 703
>gi|410971335|ref|XP_003992125.1| PREDICTED: 5'-3' exoribonuclease 1 [Felis catus]
Length = 1672
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 240/620 (38%), Positives = 348/620 (56%), Gaps = 94/620 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP FYRW+++RYP + +VV+E Q+ EFDNLYLDMNGII
Sbjct: 1 MGVPKFYRWISERYPC-LSEVVKEH-QIP------------------EFDNLYLDMNGII 40
Query: 61 HPCFHPDGKPAP--TSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C HP+ S D +F IF Y++ +F +++PRK+ ++A+DGVAPRAKMNQQR R
Sbjct: 41 HQCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RFR+AK+A E++++K E+ G+ L + + DSN ITPGT+FMA L L+YF
Sbjct: 101 RFRSAKEA------EDKIKKALEK-GETLPTEAR---FDSNCITPGTEFMARLHEHLKYF 150
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
+ +++ WQ + S PGEGEHKIM +IR ++ P DPNTRHCLYGLDADLI
Sbjct: 151 VNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLI 210
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
ML L +HE HFS+LRE + G++ + VC ++T H
Sbjct: 211 MLGLTSHEAHFSLLREEVRFGGKKTQ-RVCAP----------------------EETTFH 247
Query: 299 KKKYQFLNIWVLREYLQYELDI--PNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEI 356
L++ ++REY+ YE + F + ERI+DD++ + F VGNDF+PH+P L I
Sbjct: 248 -----LLHLSLMREYIDYEFSVLKDKITFKYDIERIIDDWILMGFLVGNDFIPHLPHLHI 302
Query: 357 REGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYE 416
A+ LL Y +GGY+ + G + L R EK++ ++ ++ + F + + +E
Sbjct: 303 NHDALPLLYGTYITILPELGGYINENGHLNLPRFEKYLVKLSDFDREHFSEVFVDLKWFE 362
Query: 417 YNEAMK-LNARRESSEELLQAPVAVADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDV 475
K LN + E + YKE+ K ++
Sbjct: 363 SKVGNKYLNEAAGVAAEEAK--------------NYKEK---------------KNQRAR 393
Query: 476 VLKYVEGLCWVCRYYYQDVCS--WQWFYPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQ 533
L ++ GL + + Y + + +YPYHYAPF SD++++S L+I F LG+PF+PF+Q
Sbjct: 394 KLLHMLGLKTLAKTYSDTTSTPIFVMYYPYHYAPFLSDIRNISTLKIHFELGKPFKPFEQ 453
Query: 534 LMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKL 593
L+ LPAAS + LP Y++LMT SPI ++YPPDF+ D+NGK+ W+ VV +PFIDEK
Sbjct: 454 LLAVLPAASKNLLPTCYQHLMTSEDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKR 513
Query: 594 LLRQTKKLEVFLTEEELFRN 613
LL + L +EE RN
Sbjct: 514 LLEAMETCNHSLKKEERKRN 533
>gi|189191016|ref|XP_001931847.1| 5'-3' exoribonuclease 2 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187973453|gb|EDU40952.1| 5'-3' exoribonuclease 2 [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 1104
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 223/470 (47%), Positives = 293/470 (62%), Gaps = 33/470 (7%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPA +RWL+ +YP + V EE P+ G+ V PVD + PNPNG EFDNLYLDMNGI+
Sbjct: 1 MGVPAMFRWLSQKYPKIVSTVQEELPKKVGDAVI-PVDRTGPNPNGEEFDNLYLDMNGIV 59
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ KPAP + D+ +IF+Y D + +VRPRKLLY+A+DGVAPRAKMNQQR+RRF
Sbjct: 60 HPCSHPEDKPAPKTEADMMMAIFEYTDRVVGMVRPRKLLYMAVDGVAPRAKMNQQRSRRF 119
Query: 121 RAAKDAAEAEAEEERLRK--------EFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLS 172
RAA++A E + E +K E+ L EK T DSN ITPGT FM +L+
Sbjct: 120 RAAREAKEKDEERAEFQKILNSQKASRGEDINTLEEVVEK--TWDSNAITPGTPFMHLLA 177
Query: 173 AALQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYG 232
+LQY+ + P W+ KVI+SDA+VPGEGEHKIM++IR QR +P DPNT H +YG
Sbjct: 178 ESLQYWCAYKFTTDPSWKDMKVIISDASVPGEGEHKIMNFIRSQRAMPTHDPNTSHVIYG 237
Query: 233 LDADLIMLSLATHEIHFSILRE-VITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNG 291
LDADLIMLSLATHE HF +LRE V G+ + C CG+ GH+ C + P D
Sbjct: 238 LDADLIMLSLATHEPHFKVLREDVFYDSGKDKVCTRCGRKGHIRTNC-----EFPEDEKK 292
Query: 292 VDD--------TPIHK-KKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFF 342
+ + T H+ K Y +L+ VLREYL E+D P F + ER +DD+VF+CFF
Sbjct: 293 LTEEEAAEEWATSEHQLKPYIWLHTNVLREYLAVEMDTPKRTFKYDLERSLDDWVFMCFF 352
Query: 343 VGNDFLPHMPTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYED 402
VGNDFLPH+P+LEIR+ I+LL+ ++R M Y+T G + RV++ + ++A E
Sbjct: 353 VGNDFLPHLPSLEIRDQGIDLLISIWRDLAAEMDDYVTKDGYPDMRRVQQIMSALASREA 412
Query: 403 QIFQKRTRIQQAYEYNEAMKLNARRESSEELLQAPVAVADTVKLGEPGYK 452
IF+KR + N ARRE+ + D V PG+K
Sbjct: 413 GIFKKRKEVADRQAANR-----ARREAQSNAHKRQRTDNDGVSA--PGFK 455
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 100/219 (45%), Positives = 131/219 (59%), Gaps = 8/219 (3%)
Query: 442 DTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFY 501
DT+ L E GY+ERYY KF ++ P +I + V +Y EGLCWV YY Q SW W++
Sbjct: 586 DTIMLWEDGYEERYYEQKFHVA-PNDI-AFRNKVARQYAEGLCWVLAYYMQGCPSWTWYF 643
Query: 502 PYHYAPFASDLKDLSDLE--ITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSS 559
P+HYAPFA+D L D++ F G PF P++QLMG LPAAS+ A+PE +R LM DP+S
Sbjct: 644 PHHYAPFAADFVGLEDMDPRKLFEKGVPFHPYEQLMGVLPAASNHAIPEPFRVLMEDPNS 703
Query: 560 PIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDL 619
I FYP DF ID+NGK+FAWQGV LPFIDEK LL L+++E RN +
Sbjct: 704 SIVDFYPEDFPIDLNGKKFAWQGVAVLPFIDEKRLLEAMATKYPELSDDERKRNEFGKET 763
Query: 620 LYVHPQHPLYQQI--TLY--CQLYHQLPPQDRFAWEIDV 654
L + L+ + LY Q H++ P A D+
Sbjct: 764 LMFSQESGLFDDVEKALYRKGQQKHKIDPAKSRALHGDI 802
>gi|340992664|gb|EGS23219.1| hypothetical protein CTHT_0008830 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 1066
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 217/417 (52%), Positives = 282/417 (67%), Gaps = 19/417 (4%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MG+PA +RWL+++YP I VVEE P V +G PVD ++PNPNG EFDNLYLDMNGI+
Sbjct: 1 MGIPAAFRWLSNKYPKIISPVVEERPIVMPDGTEIPVDATRPNPNGEEFDNLYLDMNGIV 60
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ KPAP +++ IF Y D I +VRPRK+L +A+DGVAPRAKMNQQR+RRF
Sbjct: 61 HPCSHPEDKPAPKDEEEMMIEIFKYTDRIVKMVRPRKILMIAVDGVAPRAKMNQQRSRRF 120
Query: 121 RAAKDAAEAEAEEER----LRKEFEEAGKLLSAKEKP------ETCDSNVITPGTQFMAV 170
RAA++A E E E+++ LRKE K + +E+P + DSN ITPGT FM +
Sbjct: 121 RAAQEAKEKEEEKKQLLKMLRKE-----KGSNMQEEPLETVVKKAFDSNSITPGTPFMDI 175
Query: 171 LSAALQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCL 230
L+A+L+Y+ +LN P W KVI+SDA VPGEGEHKIM +IR QR+ P +PNTRH +
Sbjct: 176 LAASLRYWCAYKLNTDPAWAKLKVIISDATVPGEGEHKIMEFIRSQRSSPEHNPNTRHVI 235
Query: 231 YGLDADLIMLSLATHEIHFSILRE-VITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADW 289
YGLDADLIML LATHE HF +LRE V + C +CGQ GH C G+ ++
Sbjct: 236 YGLDADLIMLGLATHEPHFRVLREDVFFQEAKARLCKLCGQKGHDERSCKGEAKQKQGEF 295
Query: 290 NGVDDT-PIHKKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFL 348
+ D P+ K + +L++ +LREYL EL++PN PF + ER +DD+VFLCFFVGNDFL
Sbjct: 296 DEKDHAQPL--KPFIWLHVSILREYLAAELEVPNLPFRWDLERAIDDWVFLCFFVGNDFL 353
Query: 349 PHMPTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIF 405
PH+P LEIRE I+ L +++ MGGYLT G V L+R + + +A ED IF
Sbjct: 354 PHLPALEIRENGIDTLTAIWKDNLPIMGGYLTKDGHVDLERAQYILNGLAKQEDAIF 410
Score = 208 bits (529), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 109/228 (47%), Positives = 146/228 (64%), Gaps = 7/228 (3%)
Query: 442 DTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFY 501
DTV+L E GY +RYY KF++ +P++I+ + V Y EGL WV +YYYQ SW+WFY
Sbjct: 570 DTVRLWEEGYADRYYEQKFKV-DPKDIE-FRHKVGRAYAEGLAWVLQYYYQGCPSWEWFY 627
Query: 502 PYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPI 561
PYHYAPFA+D DL+ +EI F G RPF+QLM LPAAS A+PE Y +LMTDP+SPI
Sbjct: 628 PYHYAPFAADFVDLAKMEIKFEKGRISRPFEQLMSVLPAASRHAIPEVYHDLMTDPNSPI 687
Query: 562 YKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLY 621
FYP +F+ID+NGK+ AWQGV LPFI+ LL K+ E L+EE+ RN D+L
Sbjct: 688 IDFYPEEFEIDLNGKKMAWQGVALLPFIEMPRLLAAMKEREHLLSEEDRARNEPGFDVLL 747
Query: 622 VHPQHP-LYQQITLYCQLYHQLPPQDRFAWEIDVNASGGMNGYIWLCE 668
+ HP LY+ IT + Q P+ ++++ S G+ G + E
Sbjct: 748 ISDAHPGLYEDITSHFYSKKQGAPK----FKLNPRRSDGLAGKVEKIE 791
>gi|443927373|gb|ELU45871.1| 5'-3' exoribonculease Dhp1 [Rhizoctonia solani AG-1 IA]
Length = 1086
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 211/411 (51%), Positives = 276/411 (67%), Gaps = 22/411 (5%)
Query: 2 GVPAFYRWLADRYPLSIVDVVEEDPQ----VDGEGVARPVDVSKPNPNGMEFDNLYLDMN 57
GVPA +RWL+ +YP + VVEE+P DG V P+D S PNPNG E D LYLDMN
Sbjct: 7 GVPALFRWLSKKYPKIVSQVVEEEPTRVPDADGNLVELPMDTSTPNPNGFELDCLYLDMN 66
Query: 58 GIIHPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRT 117
GI PAP + +D+ +F+Y D + + RPRKLL++AI VAPRAKMNQQR+
Sbjct: 67 GI----------PAPETEEDMMVEVFNYTDRVVSMARPRKLLFMAI--VAPRAKMNQQRS 114
Query: 118 RRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQY 177
RRFRAA++A E E E + K FE G +S + + DSN ITPGT FM +L+ +L+Y
Sbjct: 115 RRFRAAQEAKEKEEERKEAIKMFEALGHSVSEETTKKAWDSNAITPGTPFMDLLAQSLRY 174
Query: 178 FIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADL 237
++ + N PGW+ +VI+SDA+VPGEGEHKIM +IR QR PG DPNTRH +YGLDADL
Sbjct: 175 WVVQKQNSDPGWKNLQVIISDASVPGEGEHKIMDFIRRQRVNPGHDPNTRHVIYGLDADL 234
Query: 238 IMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPI 297
IML+LATHE HF +LRE + + C +CGQ GH AA+C GKP + P
Sbjct: 235 IMLALATHEPHFRVLREDVFADSNKNSCRICGQEGHFAAQCTGKPKEKDT------SKPP 288
Query: 298 HKKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIR 357
KK + FL++ VLREYL EL++PN PF + ER +DD+VFL FFVGNDFLPH+P+LEIR
Sbjct: 289 EKKPFIFLDVAVLREYLAIELNVPNIPFAFDLERAIDDWVFLIFFVGNDFLPHLPSLEIR 348
Query: 358 EGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKR 408
EGAI+ L+ +++ E MGGYL + G+ V+ ++ +A ED+IF+KR
Sbjct: 349 EGAIDTLLKIWKDELPRMGGYLAEHGQANKANVQIMLEGLAKREDEIFRKR 399
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 115/259 (44%), Positives = 160/259 (61%), Gaps = 13/259 (5%)
Query: 438 VAVADTVKLGEPGYKERYYADKF--EISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVC 495
V DT+KL EPGYKERYY KF E+++ E ++K + Y+EGLCWV +YYYQ
Sbjct: 644 VEQEDTIKLWEPGYKERYYRSKFGAELNDTE----LRKQITTSYMEGLCWVLQYYYQGAP 699
Query: 496 SWQWFYPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMT 555
SW WFYPYH+APFA+D +D+ ++I F LG+PF+P++QLMG PAAS +P +++LMT
Sbjct: 700 SWTWFYPYHFAPFAADFEDVEHMDIKFNLGQPFKPYEQLMGVFPAASRVHIPTPFQSLMT 759
Query: 556 DPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSV 615
D SPI FYP +F+IDMNGK+ +WQGV LPFIDEK LL + L+++E+ RN
Sbjct: 760 DEDSPIIDFYPTEFEIDMNGKKMSWQGVALLPFIDEKRLLGAMAERYPELSDDEVRRNKW 819
Query: 616 MLDLLYVHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVNASGGMNGYIWLCERNGLRSI 675
+ +YV + LY +C LY + + +D S G++G + S
Sbjct: 820 GSNHIYVSDGNDLYD---FFCGLYTKQ--RSEKPIPLDTRLSRGISGTVLHDPACVPDSS 874
Query: 676 IPSPVK--GLPDIERNQAM 692
PSP+ GLPDI N+ +
Sbjct: 875 YPSPLTRVGLPDIVANRTL 893
>gi|407420481|gb|EKF38586.1| 5'-3' exonuclease XRNA, putative [Trypanosoma cruzi marinkellei]
Length = 1446
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 242/639 (37%), Positives = 355/639 (55%), Gaps = 73/639 (11%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP F+RW+A+RYP I + P VD NLYLDMNGII
Sbjct: 1 MGVPKFFRWVAERYPTVITPFRDSPPPVD---------------------NLYLDMNGII 39
Query: 61 HPCFHP---DGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRT 117
H C H D + + +++F Y++ +F +++PRK +LA+DGVAPRAKMNQQR
Sbjct: 40 HNCTHTNDVDATQKSPTEKAMMEAMFAYLEKLFNVIQPRKYFFLAVDGVAPRAKMNQQRQ 99
Query: 118 RRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQY 177
RR+R+ D A R+E G+ ++ + DSN ITPGT FM +S LQY
Sbjct: 100 RRYRSGYDLMVA-------RQEAIAQGE--EVPDEKDVFDSNCITPGTNFMVRVSEQLQY 150
Query: 178 FIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADL 237
FI ++ P WQ +V+ S + PGEGEHKI+ +IR ++ P + PN HC+YGLDADL
Sbjct: 151 FITMKIAMDPAWQNCQVVYSGHDSPGEGEHKIVDFIRRRKMQPEYSPNETHCMYGLDADL 210
Query: 238 IMLSLATHEIHFSILREVITL-PGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTP 296
+MLSLATHE HF +LREV+T PGQ+ + + + NG+
Sbjct: 211 VMLSLATHEPHFLLLREVVTFGPGQESR--------------RAREQREEDEANGIVADK 256
Query: 297 IHKKKYQFL--NIWVLREYLQYELDIP---NPPFPINF--ERIVDDFVFLCFFVGNDFLP 349
++K +F+ ++ VLR+YL +LD+ P N+ ER++DDFV +CFFVGNDFLP
Sbjct: 257 SYRKADEFVLFHVNVLRDYL--DLDVRGKLGAKLPANYDLERVLDDFVLMCFFVGNDFLP 314
Query: 350 HMPTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRT 409
+PTL I +G++ ++ +Y + G YLT+ G++ VE ++Q ++ E ++ +
Sbjct: 315 TIPTLGIHDGSLLQMIDLYCKCILVEGVYLTNQGQINWRAVELWLQGIS--ELELTTIKA 372
Query: 410 RIQQAYEYNEAMKLNARRESSEELLQAPVAVADTVKLGEPGYKERYYADKFEIS---NPE 466
R QQ EY M RR+ + E A ++++ YKER+Y +K +P+
Sbjct: 373 RQQQEEEYQRKM---TRRDPTHEAAAITSAHIESIR----DYKERFYREKHGFDKGWDPQ 425
Query: 467 EIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDL--EITFFL 524
K D+ L YVEGL WV YYYQ SW+WF+P+HYAP ASDL +L + + F
Sbjct: 426 --GKEMADLRLHYVEGLMWVMGYYYQGPPSWKWFFPHHYAPMASDLVNLPAIAARVEFDP 483
Query: 525 GEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVV 584
G+PF P QL+ LP S ++P Y LM SP+ +F+P QID R W+G+V
Sbjct: 484 GKPFLPHQQLLAVLPPMSYRSMPRAYWPLMLSDKSPLKRFFPEILQIDRENARAPWEGIV 543
Query: 585 KLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVH 623
+PFI+E++LL + ++ + E+ N + L+ +
Sbjct: 544 LIPFIEERVLLAAYQSVQNKVEPEDEVHNRLGPATLFAY 582
>gi|123469987|ref|XP_001318202.1| XRN 5'-3' exonuclease N-terminus family protein [Trichomonas
vaginalis G3]
gi|121900955|gb|EAY05979.1| XRN 5'-3' exonuclease N-terminus family protein [Trichomonas
vaginalis G3]
Length = 797
Score = 407 bits (1045), Expect = e-110, Method: Compositional matrix adjust.
Identities = 268/725 (36%), Positives = 379/725 (52%), Gaps = 88/725 (12%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGM---EFDNLYLDMN 57
MGVPAF+R L+ +YPL I + +E + +G + + S PNPN + EFD LYLDMN
Sbjct: 1 MGVPAFFRTLSRKYPLIISNCIEPH-ETNGHYLP---NASLPNPNTIGDREFDCLYLDMN 56
Query: 58 GIIHPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRT 117
G+IHPCFHP+G P P S +V ++I +YI+ +F++VRPR++L++AIDG APRAKMNQQR
Sbjct: 57 GLIHPCFHPEGLPPPKSEAEVLQNIENYIERLFMIVRPRQILFMAIDGPAPRAKMNQQRK 116
Query: 118 RRFRAAKDAAE---AEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAA 174
RRF AAK AA + + + E E A +L + + + DSNVITPGT F LS
Sbjct: 117 RRFFAAKQAAHDRWIKYWKAQKSGETELAAELYNP-DYLKNHDSNVITPGTLFFERLSKH 175
Query: 175 LQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLD 234
L FIQ + P W VILSDA+VPGEGEHKIM ++R QR P +D N H +YGLD
Sbjct: 176 LHGFIQRKQETDPAWGKICVILSDASVPGEGEHKIMDFVRAQRLEPQYDSNRHHVIYGLD 235
Query: 235 ADLIMLSLATHEIHFSILREVIT----LPGQQEKCFVCGQVGHLAAECHGKPGDNPADWN 290
AD+I L LA+HE +++ILRE I LP Q + + A H + D P +
Sbjct: 236 ADIIFLGLASHEPYWTILRERINEAKDLPRQNSQQKKATEEDEKMA-LHHQIFDAPEEKE 294
Query: 291 GVDDTPIHKKKYQFLNIWVLREYLQYELDIPN--PPFPINFERIVDDFVFLCFFVGNDFL 348
VD I K + F+++W+LR+YL+ +L N P P + ER +DDF+F+C+ GNDF+
Sbjct: 295 KVD--LIGPKHFDFVSLWILRQYLERDLKPRNLPPNLPWDLERAIDDFIFICYGCGNDFI 352
Query: 349 PHMPTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKR 408
P +P I EG ++ ++ +Y+ YLT G+V R + F++ + +R
Sbjct: 353 PTLPGFSIAEGTVSDIICLYKNNLPRYNAYLTYNGQVDFPRFKDFMKLIC-------DER 405
Query: 409 TRIQQAYEYNEAMKLNARRESSEEL-------LQAP------------------------ 437
+ +E N + + + SEE+ QAP
Sbjct: 406 RTGEYVFERNSLLHILCPEQRSEEIEKQVNKISQAPDPDIDQEPPTEAEEKKEERKTKNI 465
Query: 438 -------VAVADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYY 490
+ V + L + K YY KF EEI K+ V ++ G+ W YY
Sbjct: 466 VPHVYEGIKVTEETDLAQ--LKRVYYKQKFHAETKEEIAKI----VTEFTRGMIWTLNYY 519
Query: 491 YQDVCSWQWFYPYHYAPFASD--LKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPE 548
+W W YPYH AP +SD L D++ F G PF P QLM LP S+ ALPE
Sbjct: 520 LHGTHNWDWSYPYHSAPCSSDWDLVDVNPATYQFDRGCPFLPLWQLMAVLPPQSAHALPE 579
Query: 549 KYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDE------KLLLRQTKKLE 602
K + LMT+ SPI FYP F ID+ G + A++G V +PFI E K + K +
Sbjct: 580 KMQFLMTNEKSPIKDFYPTTFSIDLEGAKQAYKGHVLVPFIGEANTDWDKRISDVMKGTD 639
Query: 603 VFLTEEELFRNSVMLDLLYVHPQH------PLYQQITLYCQLYHQLPPQDRFAWEIDVNA 656
+ LT EE RN +++ + P+ ++ + Y P R W DV+
Sbjct: 640 LRLTYEEEQRNQFSPTYIFLDDEKAPGGKPPITRESPIIPMNY---PVVGRLTWTRDVDD 696
Query: 657 SGGMN 661
G +
Sbjct: 697 HDGTS 701
>gi|307194446|gb|EFN76744.1| 5'-3' exoribonuclease 1 [Harpegnathos saltator]
Length = 1642
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 243/657 (36%), Positives = 351/657 (53%), Gaps = 104/657 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP F+R++++R+P + + ++E P EFD LYLDMNGI+
Sbjct: 1 MGVPKFFRYISERHPC-LSETIKE--------YQMP-----------EFDYLYLDMNGIV 40
Query: 61 HPCFHPDGKPAP--TSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C HP+ S D +F +IF YI+ +F ++RP+KL ++AIDGVAPRAK+NQQR+R
Sbjct: 41 HACSHPNDSDVHFRISEDTIFNNIFHYIEVLFNMIRPQKLFFMAIDGVAPRAKINQQRSR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RFR AKDA EA + G ++ ++K DSN ITPGT FMA L+ L F
Sbjct: 101 RFRTAKDAEVQEANAKI-------HGLVIPTEKK---FDSNCITPGTFFMAELTRRLNRF 150
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
I +++ W+ KV+ S + VPGEGEHKIM +IR + +D N+RHCLYGLDADLI
Sbjct: 151 IVHKISIDDTWKKCKVLFSGSEVPGEGEHKIMDFIRHMKASKDYDFNSRHCLYGLDADLI 210
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
ML L +HE +FS+LRE + +Q+K TP
Sbjct: 211 MLGLCSHEPNFSLLREEVKFGKKQKKI----------------------------QTP-E 241
Query: 299 KKKYQFLNIWVLREYLQYELD--IPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEI 356
+ K+ L++ +LREY+ +E FP + E+I+DD+V + F VGNDF+PH+P L I
Sbjct: 242 ETKFCLLHLSLLREYIDHEFSPVKDKISFPYDIEKIIDDWVLMGFLVGNDFIPHLPNLHI 301
Query: 357 REGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAV---------YED-QIFQ 406
GA+ +L Y GY+ + G + L+R EKF++ ++ Y D + F+
Sbjct: 302 TSGALPILYRAYMEVLPTFEGYINETGTLNLNRFEKFMERLSRLDVKQFNEHYADLKYFE 361
Query: 407 KRTRIQ------QAYEYNEAMKLNARRESSEELLQAPVAVADTVKLGEPG---------- 450
+T + Y+ +E + + ++ + L A + + LG
Sbjct: 362 SKTGRKPNEFERHIYKKSEDGEATSPKKIQNKDLDALIKSTAEMSLGHSDEDDDLDMMDD 421
Query: 451 -------------YKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSW 497
+K YY +K E N + + YV + W YYY CSW
Sbjct: 422 ESDSDIYHMEFVQHKRDYYMNKLEYKNVDA--DFLRSQAEGYVRAIQWNLHYYYNGCCSW 479
Query: 498 QWFYPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDP 557
W+YP+HYAP+ SD+KD DL++ F LGEPF PF+QL+ LPA S LP +++L+ +
Sbjct: 480 SWYYPHHYAPYISDIKDFKDLKLEFELGEPFLPFEQLLAVLPAYSKDLLPVTFQSLLVEK 539
Query: 558 SSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNS 614
SPI +YP DF+ D+NGK+ W+ VV +PFIDEKLLL + LT EE RN+
Sbjct: 540 DSPIISYYPTDFKTDLNGKQQEWEAVVLIPFIDEKLLLAAMQPHLSKLTPEEKQRNA 596
>gi|440466364|gb|ELQ35636.1| 5'-3' exoribonuclease 2 [Magnaporthe oryzae Y34]
gi|440487857|gb|ELQ67622.1| 5'-3' exoribonuclease 2 [Magnaporthe oryzae P131]
Length = 1041
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 210/446 (47%), Positives = 289/446 (64%), Gaps = 30/446 (6%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MG+PA +RWL+ +YP I V+E+ P +G + PVD++KPNPNG EFDNLYLDMNGI+
Sbjct: 1 MGIPAAFRWLSTKYPKIISPVIEDKPVEMEDGTSIPVDITKPNPNGEEFDNLYLDMNGIV 60
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAI----------------- 103
HPC HP+ +PAP +++ IF Y D +F +VRPRK+L +A+
Sbjct: 61 HPCAHPEDRPAPQDEEEMMLEIFKYTDRVFNMVRPRKVLMIAVGKDSKHYPKCELYINPI 120
Query: 104 ----DGVAPRAKMNQQRTRRFRAAKDAAE-AEAEEERLRKEFEEAGKLLSAKE----KPE 154
DGVAPRAKMNQQR+RRFR+A++A E AE + E L+ ++ G +SA+ +
Sbjct: 121 QPLLDGVAPRAKMNQQRSRRFRSAQEAKEKAEDKLELLKLLKQQKGGDVSAETLESVTKK 180
Query: 155 TCDSNVITPGTQFMAVLSAALQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIR 214
D+N ITPGT FM +L+ +L+Y+ +LN PGW K+I+SDA VPGEGEHKIM ++R
Sbjct: 181 AFDTNSITPGTPFMDILAGSLRYWCAYKLNTDPGWANVKIIISDATVPGEGEHKIMDFVR 240
Query: 215 LQRNLPGFDPNTRHCLYGLDADLIMLSLATHEIHFSILRE-VITLPGQQEKCFVCGQVGH 273
QR+ P DPNTRH +YGLDADLIML LATHE HF +LRE V G+ C +CGQ GH
Sbjct: 241 SQRSSPDHDPNTRHVIYGLDADLIMLGLATHEPHFRVLREDVFFQQGKPRLCKLCGQKGH 300
Query: 274 LAAECHGKPGDNPADWNGVDDT-PIHKKKYQFLNIWVLREYLQYELDIPNPPFPINFERI 332
A +C G+ +++ + P+ K + +L++ +LREYL EL +P+ PF + ER
Sbjct: 301 DAQQCKGEVKKKEGEFDEKQNAEPL--KPFIWLHVAILREYLNVELYVPDLPFRFDLERA 358
Query: 333 VDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEK 392
VDD++FLC FVGNDFLPH+P LEIRE I L ++++ MGGY+T G + L+RV+
Sbjct: 359 VDDWIFLCCFVGNDFLPHLPALEIRENGIITLTSIWKQNLPRMGGYVTKDGHIDLERVQY 418
Query: 393 FIQSVAVYEDQIFQKRTRIQQAYEYN 418
+ +A ED IF+KR + + N
Sbjct: 419 IMDGLAKQEDSIFRKRKEQEDRRDAN 444
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 92/194 (47%), Positives = 120/194 (61%), Gaps = 3/194 (1%)
Query: 440 VADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQW 499
DTV+L E GY +RYY KF + +P+ ++ + V YVEGL WV YY+Q SW+W
Sbjct: 567 AVDTVRLWEDGYTDRYYEQKFHV-DPKNVE-FRHKVAHAYVEGLSWVLLYYFQGCPSWEW 624
Query: 500 FYPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSS 559
FYPYHYAPFA D L DLEI+F G +P++QLM LPAAS LP + +LMT S
Sbjct: 625 FYPYHYAPFAQDFVGLKDLEISFEKGRKSKPYEQLMSVLPAASRDNLPPIFHDLMTKEDS 684
Query: 560 PIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDL 619
I FYP DF++D+NGK+FAWQGV LPFI+ LL + L+ +E RN + D+
Sbjct: 685 EIIDFYPEDFEVDLNGKKFAWQGVALLPFIEMDRLLAAVQAKYPELSADEAARNGLGRDV 744
Query: 620 LYVHPQH-PLYQQI 632
L + H PLY +
Sbjct: 745 LIISDAHAPLYDDL 758
>gi|294953215|ref|XP_002787652.1| 5'-3' exoribonuclease, putative [Perkinsus marinus ATCC 50983]
gi|239902676|gb|EER19448.1| 5'-3' exoribonuclease, putative [Perkinsus marinus ATCC 50983]
Length = 982
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 214/426 (50%), Positives = 284/426 (66%), Gaps = 20/426 (4%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVE----EDPQVDGEGVAR---PVDVSKPNPNGMEFDNLY 53
MGVP F+RWL RYP I D VE E P G+G PVD +PNPNG+EFDNLY
Sbjct: 1 MGVPTFFRWLCTRYPKVIKDAVEKVCIEVPGEGGDGANTYDVPVDFEEPNPNGIEFDNLY 60
Query: 54 LDMNGIIHPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMN 113
LD+NGIIHPC HP+ P + D +F +I Y+D + +VRPRKLLY+AIDGVAPRAKMN
Sbjct: 61 LDLNGIIHPCCHPEDGMTPENEDVMFLNIMRYVDRLVRIVRPRKLLYVAIDGVAPRAKMN 120
Query: 114 QQRTRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSA 173
QQR RRF+AA++A E EEE+LR++ + G+ +K K DSNVITPGT F+ ++
Sbjct: 121 QQRARRFKAAQEATEQMKEEEKLRRQMVKEGREPPSK-KGVPWDSNVITPGTPFLDKVAH 179
Query: 174 ALQYFIQARLNQIPGWQFT--KVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLY 231
L ++I R+ P WQ + ILSDA PGEGEHKIM +IR QR + G++PNT H LY
Sbjct: 180 MLHWYISDRMTNDPLWQLLGFRCILSDAGSPGEGEHKIMDFIRKQRMMEGYNPNTTHMLY 239
Query: 232 GLDADLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGD-NPADWN 290
G DADLIML LATHEI F I+REV+ P ++ KC++CG+VGHL +EC G + D +
Sbjct: 240 GADADLIMLGLATHEISFYIIREVVLKP-EERKCYLCGKVGHLPSECTGDDQQPDLGDES 298
Query: 291 GVDDTPIHKKKYQFLNIWVLREYLQYELDI----PNP----PFPINFERIVDDFVFLCFF 342
D+ + K +Q +++ VLREYL + PN PFP + ER++DDFVF+CFF
Sbjct: 299 EEDEDMLEMKPFQIISLPVLREYLVEQFTTAFCPPNQKCILPFPFDVERVIDDFVFMCFF 358
Query: 343 VGNDFLPHMPTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYED 402
VGNDFLPH+P+L IR+G+I+ ++ +Y + YLT GEV L +VE F+ + ED
Sbjct: 359 VGNDFLPHLPSLNIRDGSIDQMICLYVEILPTLTDYLTCQGEVNLVQVEVFLDYLGRVED 418
Query: 403 QIFQKR 408
++F++R
Sbjct: 419 EVFRRR 424
Score = 162 bits (409), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 88/200 (44%), Positives = 118/200 (59%), Gaps = 10/200 (5%)
Query: 442 DTVKLGEPG---YKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQ 498
D V+LGE G +K+RYY DKF ++ + D + + + YVEG+CWV +YYYQ V SW
Sbjct: 553 DRVRLGEGGEHSWKQRYYTDKFHVTQEDFADFIPR-IRKAYVEGICWVLQYYYQGVVSWD 611
Query: 499 WFYPYHYAPFASDLKDLSDLEIT----FFLGEPFRPFDQLMGTLPAASS--SALPEKYRN 552
WFYPYHYAPFA+DL S LE + G+PF P QLM LP S + +P + +
Sbjct: 612 WFYPYHYAPFATDLVGCSALECNKASYYTKGKPFLPLQQLMSVLPPRSGPPADIPVEMQK 671
Query: 553 LMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFR 612
LMT+P+S I FYP DF +D+NGK+F WQ V+ LPFI + L+ + L E R
Sbjct: 672 LMTEPNSSIIDFYPEDFALDLNGKKFTWQAVILLPFIIQDRLIAALQPFIDKLDGERKRR 731
Query: 613 NSVMLDLLYVHPQHPLYQQI 632
N+ L+VH L Q+
Sbjct: 732 NTPAEPRLFVHMNDTLAPQL 751
>gi|169606446|ref|XP_001796643.1| hypothetical protein SNOG_06264 [Phaeosphaeria nodorum SN15]
gi|160706992|gb|EAT86095.2| hypothetical protein SNOG_06264 [Phaeosphaeria nodorum SN15]
Length = 1021
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 212/442 (47%), Positives = 287/442 (64%), Gaps = 17/442 (3%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPA +RWL+ +YP + V EE P+ G+ V PVD + PNPNG EFDNLYLDMNGI+
Sbjct: 1 MGVPAMFRWLSQKYPKIVSTVQEEQPKKVGDEVI-PVDRTGPNPNGEEFDNLYLDMNGIV 59
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ KPAP + D+ +IF+Y D + +VRPRKLLY+A+DGVAPRAKMNQQR+RRF
Sbjct: 60 HPCSHPEDKPAPKTEADMMMAIFEYTDRVVGMVRPRKLLYMAVDGVAPRAKMNQQRSRRF 119
Query: 121 RAAKDAAEAEAEE----ERLRKEFEEAGKLLSAKEK--PETCDSNVITPGTQFMAVLSAA 174
RAA++A E + E + L + G+ +++ E+ +T DSN ITPGT FM +L+ +
Sbjct: 120 RAAREAKEKDEERAEFLKMLNSQKASRGEDINSLEEVVEKTWDSNAITPGTPFMHLLAES 179
Query: 175 LQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLD 234
LQY+ + P W+ KVI+SDA+VPGEGEHKIM+++R QR +P DPNTRH +YGLD
Sbjct: 180 LQYWCAYKFTTDPSWKDMKVIISDASVPGEGEHKIMNFVRSQRAIPTHDPNTRHVIYGLD 239
Query: 235 ADLIMLSLATHEIHFSILRE-VITLPGQQEKCFVCGQVGHLAAECH----GKPGDNPADW 289
ADLIMLSLATHE HF +LRE V G+ + C CG+ GH+ C GK
Sbjct: 240 ADLIMLSLATHEPHFRVLREDVFFDSGKDKACTRCGRKGHIRNNCEFPDDGKKLTEEEAA 299
Query: 290 NGVDDTPIHKKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLP 349
+ K Y +L+ +LREYL E++ P F + ER +DD+VF+CFFVGNDFLP
Sbjct: 300 EEWAASEHPPKPYIWLHTNILREYLAVEMETPKRRFKYDLERSLDDWVFMCFFVGNDFLP 359
Query: 350 HMPTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRT 409
H+P+LEIR+ I+LL+ ++R M Y+T G + RV++ + ++A E IF+KR
Sbjct: 360 HLPSLEIRDQGIDLLISIWRDLAAEMDDYVTKDGFPDMRRVQQILGALASREADIFKKRK 419
Query: 410 RIQQAYEYNEAMKLNARRESSE 431
+ N ARRE+ +
Sbjct: 420 EVSDRQAANR-----ARREAQQ 436
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 55/121 (45%), Positives = 72/121 (59%), Gaps = 9/121 (7%)
Query: 442 DTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFY 501
DT+KL E GY+ERYY KF ++ P++I + V +Y EGLCWV YY Q SW W++
Sbjct: 555 DTIKLWEDGYEERYYEQKFHVA-PDDI-AFRNKVARQYAEGLCWVLAYYMQGCPSWTWYF 612
Query: 502 PYHYAPFASDLKDLSDLE--ITFFLGEPFRPFDQLMGTLPAASSS----ALPEKYRNLMT 555
P+HYAPFA+D L D++ F G PF P++QLM LP S A+ KY L
Sbjct: 613 PHHYAPFAADFVGLEDMDPRKLFEKGTPFHPYEQLM-VLPFIDSKRLLDAMATKYPELSD 671
Query: 556 D 556
D
Sbjct: 672 D 672
>gi|407853365|gb|EKG06397.1| 5'-3' exonuclease XRNA, putative [Trypanosoma cruzi]
Length = 1646
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 238/643 (37%), Positives = 353/643 (54%), Gaps = 81/643 (12%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP F+RW+A+R P I + P VD NLYLDMNGII
Sbjct: 206 MGVPKFFRWVAERCPTVITPFRDSPPPVD---------------------NLYLDMNGII 244
Query: 61 HPCFHP---DGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRT 117
H C H D + + +++F Y++ +F +++PRK +LA+DGVAPRAKMNQQR
Sbjct: 245 HNCTHTNDVDATQKSPTEKAMMEAMFAYLEKLFNVIQPRKYFFLAVDGVAPRAKMNQQRQ 304
Query: 118 RRFRA------AKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVL 171
RR+R+ A+ A A+ EE ++ + DSN ITPGT FM +
Sbjct: 305 RRYRSGYELMVARQEAIAQGEE---------------VPDEKDVFDSNCITPGTNFMVRV 349
Query: 172 SAALQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLY 231
S QYFI ++ P WQ +V+ S + PGEGEHKI+ +IR ++ PG+ PN HC+Y
Sbjct: 350 SEQFQYFITMKIATDPAWQNCQVVYSGHDNPGEGEHKIVDFIRRRKMQPGYSPNETHCMY 409
Query: 232 GLDADLIMLSLATHEIHFSILREVITL-PGQQEKCFVCGQVGHLAAECHGKPGDNPADWN 290
GLDADL+MLSLATHE HF +LREV+T PGQ+ + + + N
Sbjct: 410 GLDADLVMLSLATHEPHFLLLREVVTFGPGQESR--------------RAREQREEDEAN 455
Query: 291 GVDDTPIHKKKYQFL--NIWVLREYLQYELDIPNP-----PFPINFERIVDDFVFLCFFV 343
G+ ++K +F+ ++ VLR+YL +LD+ + P + +R++DDFV +CFF+
Sbjct: 456 GIIADKSYRKADEFVLFHVNVLRDYL--DLDVRDKLGAKMPACYDLDRVLDDFVLMCFFI 513
Query: 344 GNDFLPHMPTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQ 403
GNDFLP +PTL I +G++ ++ +Y + G YLT+ G++ VE ++Q + E +
Sbjct: 514 GNDFLPTIPTLGIHDGSLLQMLDLYCKCILVEGMYLTNQGQINWRAVELWLQGIG--ELE 571
Query: 404 IFQKRTRIQQAYEYNEAMKLNARRESSEELLQAPVAVADTVKLGEPGYKERYYADKFEIS 463
+ + R QQ EY + ARR+ + E A ++++ YKER+Y +K
Sbjct: 572 LTTIKARQQQEEEYQRKV---ARRDPTHETAAITSAPIESIR----EYKERFYREKHGFD 624
Query: 464 NP-EEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDL--EI 520
N + K D+ L YVEGL WV YYYQ SW+WF+P+HYAP ASDL +L + +
Sbjct: 625 NGWDPQGKEMADLRLHYVEGLTWVMGYYYQGPPSWKWFFPHHYAPMASDLVNLPAIAARV 684
Query: 521 TFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAW 580
F +PF P QL+ LP S ++P Y LM SP+ +F+P +ID G R W
Sbjct: 685 EFDPSKPFLPHQQLLAVLPPMSYRSMPRAYWPLMLSDKSPLKRFFPEILKIDREGARAPW 744
Query: 581 QGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVH 623
+G+V +PFI+E++LL + ++ L E+ N + L+ +
Sbjct: 745 EGIVLIPFIEERVLLAAYQSVQNKLGPEDEVHNRLGPATLFAY 787
>gi|255941486|ref|XP_002561512.1| Pc16g12130 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211586135|emb|CAP93883.1| Pc16g12130 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 1015
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 207/444 (46%), Positives = 283/444 (63%), Gaps = 34/444 (7%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQV-DGEGVARPVDVSKPNPNGMEFDNLYLDMNGI 59
MGVPA +RWL+++YP + V+EE PQV DGE + P+D+++PNPNG E DNLYLDMNGI
Sbjct: 1 MGVPALFRWLSNKYPKIVSPVIEEQPQVVDGEEI--PIDITRPNPNGEEQDNLYLDMNGI 58
Query: 60 IHPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRR 119
+HPC HP+GKP P ++ I+ Y D + +VRPRKLL +AIDGVAPRAKMNQQR RR
Sbjct: 59 VHPCTHPEGKPPPADEQEMMMEIYKYTDRVVNMVRPRKLLMIAIDGVAPRAKMNQQRARR 118
Query: 120 FRAAKDAAEAEAEEERLRKEFEE------AGKLLSAKEKPETCDSNVITPGTQFMAVLSA 173
FR+A++A E + ++E L K + +L+ + +T DSNVITPGT FM +L+A
Sbjct: 119 FRSAQEAKENDQKKEELHKMLAQQHATKTGEQLIREEVVQKTWDSNVITPGTPFMDILAA 178
Query: 174 ALQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGL 233
+L+Y+I +LN PGW+ K+I+SDA VPGEGEHKIM++
Sbjct: 179 SLRYWIAYKLNTDPGWENLKIIISDATVPGEGEHKIMNF--------------------- 217
Query: 234 DADLIMLSLATHEIHFSILRE-VITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGV 292
DADLIML L THE +F +LRE V + C +CGQ GH A EC G+P + +++
Sbjct: 218 DADLIMLGLGTHEPYFRVLREDVFAQDSRPRGCRLCGQNGHKAEECLGRPKEKSGEFDEK 277
Query: 293 DD-TPIHKKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHM 351
P+ K + +L++ VLREYL EL +P PFP + ER +DD+VF+CFFVGNDFLPH+
Sbjct: 278 QHAAPL--KPFIWLHVAVLREYLAVELRVPQQPFPFDLERALDDWVFMCFFVGNDFLPHL 335
Query: 352 PTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRI 411
P+L+IRE I+ L+ ++R AMG YLT G V L + +Q +A ED IF +R +
Sbjct: 336 PSLDIRENGIDTLIAIWRDSLPAMGSYLTKDGSVELKNAQIILQGLAKQEDAIFARRRQA 395
Query: 412 QQAYEYNEAMKLNARRESSEELLQ 435
+ + NE + +EE Q
Sbjct: 396 DERKQANEKRRKEQDAARNEERAQ 419
Score = 212 bits (539), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 111/253 (43%), Positives = 162/253 (64%), Gaps = 8/253 (3%)
Query: 442 DTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFY 501
DTVKL EPGY +RYY KF + +P++++ + V +Y GLCWV RYY+Q SW W+Y
Sbjct: 568 DTVKLWEPGYADRYYEQKFGV-DPKDLE-FRHQVAREYAIGLCWVLRYYFQGCPSWTWYY 625
Query: 502 PYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPI 561
P HYAPFA+D D++D+++ F G F+PF+QLMG LPA+S+ ALP+ + LM P S I
Sbjct: 626 PRHYAPFAADFVDIADMDVKFEKGTIFKPFEQLMGVLPASSNHALPKVFHPLMESPDSEI 685
Query: 562 YKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLY 621
FYP DF +D+NGK+FAWQGV+ LPFIDE LL K+ LTE+E RN+ ++L
Sbjct: 686 IDFYPEDFPLDLNGKKFAWQGVILLPFIDETRLLNAMAKVYPLLTEDEKSRNTHGQEVLL 745
Query: 622 VHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVNASGGMNGYIWLCERNGLRSIIPSPVK 681
+ ++PLYQ L Y + P ++ + DV SGG+ G + E S + SP++
Sbjct: 746 LSDRNPLYQD--LVANFYSKKPGPAQYPLKEDV--SGGLAGIVERSETYIPHSSLVSPLE 801
Query: 682 --GLPDIERNQAM 692
G+P ++ ++++
Sbjct: 802 AHGMPGVDDDRSL 814
>gi|222615546|gb|EEE51678.1| hypothetical protein OsJ_33030 [Oryza sativa Japonica Group]
Length = 954
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 209/397 (52%), Positives = 260/397 (65%), Gaps = 22/397 (5%)
Query: 1 MGVPAFYRWLADRYP--LSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNG 58
MGVP+FYRWL +YP +S + ++D G A P + NLYLDMNG
Sbjct: 1 MGVPSFYRWLVGKYPAIVSPANDDDDDVGSSSNGAAAPP----------VYHNLYLDMNG 50
Query: 59 IIHPCFHPDGK-----PAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMN 113
IIHPCFHP + P PT+ ++VF S+FDY+D + +VRP LLYLA+DGVAPRAKMN
Sbjct: 51 IIHPCFHPQDQVCPPSPVPTTLEEVFHSMFDYMDRLIRIVRPTSLLYLAVDGVAPRAKMN 110
Query: 114 QQRTRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKE---KPETCDSNVITPGTQFMAV 170
QQR RRF++A A +AE EE LR F GK + +E E D NVIT GT+FM
Sbjct: 111 QQRARRFKSAMAAKQAEVEENILRDRFRAEGKKVLPRETSSSSEVSDPNVITLGTEFMDK 170
Query: 171 LSAALQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCL 230
LS AL+Y+I+ARLN P W+ VILSDANVPGEGEHKIMS+IR QR G+DPNTRHCL
Sbjct: 171 LSDALKYYIRARLNSDPLWKDINVILSDANVPGEGEHKIMSFIRAQRGREGYDPNTRHCL 230
Query: 231 YGLDADLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDN--PAD 288
YGLDADLIML+LA+HE+HFSILRE + QE + E P
Sbjct: 231 YGLDADLIMLALASHEVHFSILREEVLHQNNQENTIPITPKTFTSQEAEKFKCRAWFPRI 290
Query: 289 WNGVDDTPIHKKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFL 348
+ + KK YQFLNIWVLREYL+ ++ IPNP ++ ER++DDFVF+CF GNDF+
Sbjct: 291 TEARPEGKLTKKPYQFLNIWVLREYLELDMKIPNPIQTLDVERMIDDFVFICFLTGNDFI 350
Query: 349 PHMPTLEIREGAINLLMHVYRREFTAMGGYLTDAGEV 385
PH+P+LEI EGAI+LL+ VY+ F MGGY+ D +V
Sbjct: 351 PHIPSLEIHEGAIDLLIEVYKTSFNKMGGYIVDTDKV 387
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 80/203 (39%), Positives = 116/203 (57%), Gaps = 25/203 (12%)
Query: 429 SSEELLQAPVAVADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCR 488
+ ++L++ D +KLG PG+K R++ +KF+ +EI K++ ++V KY+EGLCWV
Sbjct: 515 NKQDLIKTGACKHDKIKLGSPGWKSRFFKEKFDAETKDEIAKLQNEMVQKYLEGLCWVLC 574
Query: 489 YYYQDVCSWQWFYPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPE 548
YY+ DV SW W+YP++YAPFASD++ LS S ALP
Sbjct: 575 YYFADVPSWSWYYPFYYAPFASDVRGLS-------------------------RSFALPG 609
Query: 549 KYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEE 608
Y LM S I FYP + ID +GKR+ WQG+ KLPFI++KLLL TK E L
Sbjct: 610 CYSKLMDCDESAIQAFYPSELDIDTDGKRYLWQGIAKLPFIEDKLLLSVTKTAEKDLAVH 669
Query: 609 ELFRNSVMLDLLYVHPQHPLYQQ 631
EL RN+V + +++ + L +
Sbjct: 670 ELRRNTVRQEKIFLRNSNALAKN 692
>gi|378727060|gb|EHY53519.1| 5'-3' exoribonculease Dhp1 [Exophiala dermatitidis NIH/UT8656]
Length = 1075
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 210/418 (50%), Positives = 281/418 (67%), Gaps = 10/418 (2%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDP-QVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGI 59
MGVPA +RWL +YP I VVEE P ++DG V PVD +KPNPNG E NLYLD NGI
Sbjct: 1 MGVPALFRWLTKKYPKIISPVVEEQPYEIDG--VQYPVDTTKPNPNGEEMHNLYLDFNGI 58
Query: 60 IHPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQ---R 116
+HPC HP+ KP P + ++ IF Y D + +VRPR+LL +AIDGVAPRAKMNQQ R
Sbjct: 59 VHPCSHPENKPPPANESEMMMEIFKYTDRVVNMVRPRRLLMIAIDGVAPRAKMNQQRARR 118
Query: 117 TRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEK--PETCDSNVITPGTQFMAVLSAA 174
R R AK+A E +AE + L ++ ++ +S +E+ +T DSNVITPGT FM +L+ +
Sbjct: 119 FRAARDAKEADEKKAEFQTLLRQQQQDRDDVSDEEEVIKKTWDSNVITPGTPFMFILAQS 178
Query: 175 LQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLD 234
++Y++Q +LN P W KVI+SDA+VPGEGEHKIM +IR QR+ P +DPNTRH +YGLD
Sbjct: 179 IRYWVQWKLNTDPAWAELKVIISDASVPGEGEHKIMQFIRSQRSDPEYDPNTRHVMYGLD 238
Query: 235 ADLIMLSLATHEIHFSILRE-VITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVD 293
ADLIML +ATHE HF +LRE V T + + C +CGQ GH A C G +++
Sbjct: 239 ADLIMLGIATHEPHFRVLREDVFTRDAKAKTCKLCGQQGHYAENCRGNAKVKAGEFDEKG 298
Query: 294 DTPIHKKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPT 353
T K + +L++ VLREYL E+ +P PF + ER +DD+VF+CFFVGNDFLPH+P+
Sbjct: 299 TTE-ELKPFIWLHVPVLREYLAAEMFVPGQPFRFDLERALDDWVFMCFFVGNDFLPHLPS 357
Query: 354 LEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRI 411
L+I E I+ L+ ++R MGGY+T G V L R + +Q +A ED IF++R +
Sbjct: 358 LDIHEDGIDKLIAIWRDNLPLMGGYVTCDGNVNLARAQIILQGLAKQEDAIFKRRKEV 415
Score = 202 bits (514), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 97/193 (50%), Positives = 128/193 (66%), Gaps = 2/193 (1%)
Query: 442 DTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFY 501
DTV+L EPGY +RYY KF +S P +I+ + V YVEGLCWV YY+Q SW W+Y
Sbjct: 585 DTVRLWEPGYADRYYEQKFHVS-PNDIE-FRHKVARAYVEGLCWVLLYYFQGCPSWTWYY 642
Query: 502 PYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPI 561
PYHYAPFA+D D+ +E+ F G PFRP++QLMG LPA+S+ A+P + LMTD S I
Sbjct: 643 PYHYAPFAADFVDIDKMEVKFDKGTPFRPYEQLMGVLPASSNHAIPPAFHPLMTDEDSEI 702
Query: 562 YKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLY 621
FYP DF +D+NGK+ +W+ VV LPFIDEK LL+ L+++E RN D L
Sbjct: 703 VDFYPEDFDLDLNGKKQSWKAVVLLPFIDEKRLLKAMGTKYPLLSDDERARNEFGKDALI 762
Query: 622 VHPQHPLYQQITL 634
+ Q+PLY ++ L
Sbjct: 763 ISDQNPLYDELAL 775
>gi|396493104|ref|XP_003843954.1| hypothetical protein LEMA_P016050.1 [Leptosphaeria maculans JN3]
gi|312220534|emb|CBY00475.1| hypothetical protein LEMA_P016050.1 [Leptosphaeria maculans JN3]
Length = 1096
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 206/424 (48%), Positives = 275/424 (64%), Gaps = 16/424 (3%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPA +RWL+ +YP + V EE P+ G+ + PVD PNPNG EFDNLYLDMNGI+
Sbjct: 1 MGVPAMFRWLSQKYPKIVSTVQEELPKKVGDEII-PVDRCGPNPNGEEFDNLYLDMNGIV 59
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ K AP + D+ +IF+Y D +VRPRKLLY+A+DGVAPRAKMNQQR+RRF
Sbjct: 60 HPCSHPEDKAAPKTEADMMMAIFEYTDRCVGMVRPRKLLYMAVDGVAPRAKMNQQRSRRF 119
Query: 121 RAAKDAAEAEAEEERLRKEF--------EEAGKLLSAKEKPETCDSNVITPGTQFMAVLS 172
R+A++AAE + E +K E+ L EK T DSN ITPGT FM +L+
Sbjct: 120 RSAREAAEKDVERAEFQKVLTAQKASRGEDVTSLEQVVEK--TWDSNAITPGTPFMHLLA 177
Query: 173 AALQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYG 232
+LQY+ + P W+ KVI+SD++VPGEGEHKIM++IR QR++P DPNT H +YG
Sbjct: 178 ESLQYWCAYKFTTDPSWKDMKVIISDSSVPGEGEHKIMNFIRSQRSMPTHDPNTSHVIYG 237
Query: 233 LDADLIMLSLATHEIHFSILRE-VITLPGQQEKCFVCGQVGHLAAECH----GKPGDNPA 287
LDADLIMLSLATHE HF +LRE V G+ + C CG+ GH+ C GK
Sbjct: 238 LDADLIMLSLATHEPHFRVLREDVFYDSGKDKTCTRCGRKGHIRNNCEFPDDGKKLTEEE 297
Query: 288 DWNGVDDTPIHKKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDF 347
++ K + +L+ +LREYL E+D P F + ER +DD+VF+CFFVGNDF
Sbjct: 298 AAEEWANSEHQLKPFIWLHTNILREYLAVEMDTPKRKFKYDLERSLDDWVFMCFFVGNDF 357
Query: 348 LPHMPTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQK 407
LPH+P+LEIR+ I+LL+ ++R M Y+T G + RV++ + ++A E IF+K
Sbjct: 358 LPHLPSLEIRDQGIDLLISIWRDLAAEMDDYVTKDGFPDMRRVQQILSALASREADIFKK 417
Query: 408 RTRI 411
R +
Sbjct: 418 RKEV 421
Score = 185 bits (469), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 95/193 (49%), Positives = 122/193 (63%), Gaps = 4/193 (2%)
Query: 442 DTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFY 501
DT+KL EPGY+ERYY KF + +P +I + V +Y EGLCWV YY Q SW W++
Sbjct: 582 DTIKLWEPGYEERYYEQKFHV-DPNDI-AFRNKVARQYAEGLCWVLAYYMQGCPSWTWYF 639
Query: 502 PYHYAPFASDLKDLSDLE--ITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSS 559
P+HYAPFA+D L D++ F G F P++QLMG LPAAS+ A+PE +R LM+D S
Sbjct: 640 PHHYAPFAADFVGLEDMDPRKLFEKGTVFHPYEQLMGVLPAASNHAIPEPFRPLMSDADS 699
Query: 560 PIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDL 619
PI FYP DF ID+NGK+FAWQGV LPFIDEK LL LT++E RN +
Sbjct: 700 PIIDFYPVDFPIDLNGKKFAWQGVAILPFIDEKRLLAAMATKYPELTDDERKRNEFGKET 759
Query: 620 LYVHPQHPLYQQI 632
L + L+ +
Sbjct: 760 LMFSQESGLFDDV 772
>gi|254579256|ref|XP_002495614.1| ZYRO0B15642p [Zygosaccharomyces rouxii]
gi|238938504|emb|CAR26681.1| ZYRO0B15642p [Zygosaccharomyces rouxii]
Length = 1012
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 202/447 (45%), Positives = 287/447 (64%), Gaps = 16/447 (3%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP+F+RWL+ +YP I V+EE PQV +GV P+D + PNPNG E DNLYLDMNGI+
Sbjct: 1 MGVPSFFRWLSRKYPKIISPVIEEQPQV-VDGVTLPIDYTAPNPNG-ELDNLYLDMNGIV 58
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ KP P + D++ ++F+Y + + + RPRK+L +A+DGVAPRAKMNQQR RRF
Sbjct: 59 HPCSHPENKPPPETEDEMLLAVFEYTNRVLNMARPRKVLMIAVDGVAPRAKMNQQRARRF 118
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLL-SAKEKPETCDSNVITPGTQFMAVLSAALQYFI 179
R+AKDA ER+ +E E+ G+++ A + +T DSN ITPGT FM L+AAL+Y+
Sbjct: 119 RSAKDAQIENENRERIMQEREQLGEIIDGAVKTKKTWDSNAITPGTPFMDKLAAALRYWC 178
Query: 180 QARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIM 239
+L PGW+ +VI+SDA VPGEGEHKIM+++R QR ++PNT HC+YGLDADLI
Sbjct: 179 SFKLATDPGWKNLQVIISDATVPGEGEHKIMNFVRSQRADAQYNPNTTHCIYGLDADLIF 238
Query: 240 LSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIHK 299
L LATHE HF +LRE + G ++ + + E + +
Sbjct: 239 LGLATHEPHFKVLREDVFAQGNNKRHNLKDSLNMSEEEKQMIAKQD------------SE 286
Query: 300 KKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREG 359
K + +L+I VLREYL EL +P PFP + ER +DD+VF+CFF GNDFLPH+P L++RE
Sbjct: 287 KPFLWLHISVLREYLSAELWVPRMPFPFDLERAIDDWVFMCFFCGNDFLPHLPCLDVREN 346
Query: 360 AINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYEYNE 419
+I++L+ +++ M Y+T GE+ L+ VEK + + E IF+ R IQ+ +
Sbjct: 347 SIDILLDIWKVVLPTMKTYITCDGELNLESVEKLLSQLGSREADIFKTR-HIQEVRKQEN 405
Query: 420 AMKLNARRESSEELLQAPVAVADTVKL 446
+ A+R S+ + P + ++L
Sbjct: 406 FERKKAQRNVSKGQDRHPTKPNEQLQL 432
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 111/257 (43%), Positives = 153/257 (59%), Gaps = 12/257 (4%)
Query: 438 VAVADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSW 497
V VKL EPGY ERYY +KF IS P ID ++KD+V Y+EG+ WV YYYQ SW
Sbjct: 603 VDTDQAVKLHEPGYHERYYTEKFHIS-PNHIDALRKDLVKCYIEGVSWVLLYYYQGCASW 661
Query: 498 QWFYPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDP 557
W+YPYHYAP A+D SD+++ F G+PF P++QLM LPAAS LP +R LM+ P
Sbjct: 662 TWYYPYHYAPLAADFFGFSDIKVEFPPGKPFLPYEQLMSVLPAASGHTLPPIFRPLMSSP 721
Query: 558 SSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVML 617
S I FYP +F +DMNGK+ WQG+ LPFIDEK LL+ + LTEEE RN V
Sbjct: 722 DSEIIDFYPTEFPVDMNGKKMPWQGIALLPFIDEKRLLQVVRAQYSKLTEEEKSRNVVRN 781
Query: 618 DLLYVHPQHPLYQQITLYCQLY-HQLPPQDRFAWEIDVNASGGMNGYIWLCERNGLR--S 674
+L + ++ Y++ +LY +PPQ ++ + G++G + + G R S
Sbjct: 782 PILLISNKNANYEK--FLKKLYPTDVPPQPELYFQ---HFRSGLSGVV-STDHEGYRPNS 835
Query: 675 IIPSPVK--GLPDIERN 689
+ P++ LP++ N
Sbjct: 836 KLSCPIQTGSLPELSTN 852
>gi|399949668|gb|AFP65326.1| dhm exonuclease [Chroomonas mesostigmatica CCMP1168]
Length = 549
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 244/631 (38%), Positives = 337/631 (53%), Gaps = 95/631 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP F+RWL++RYPL ++E + +FD YLDMNGII
Sbjct: 1 MGVPKFFRWLSERYPLINQRLLENN----------------------QFDCFYLDMNGII 38
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
H C + + +++F+ IF Y DH+F +VRPRKL+YLAIDGVAPRAKMNQQR+RRF
Sbjct: 39 HNCSQKNNEIGTQYEEELFRKIFSYTDHLFRIVRPRKLIYLAIDGVAPRAKMNQQRSRRF 98
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQ 180
R+ K+ + + +E+ L EK + DSN ITPGT FM LS + + ++
Sbjct: 99 RSVKELEKTKLTQEK--------NVPLENFEK-KYFDSNCITPGTTFMKRLSQSFKKWLA 149
Query: 181 ARLNQIPGWQ-FTKVILSDANVPGEGEHKIMSYIR-LQRNLPGFDPNTRHCLYGLDADLI 238
++ P WQ +I S + VPGEGEHKIM+YIR +Q++ + RHCLYGLDADLI
Sbjct: 150 KKIRNDPEWQQGCDIIFSGSEVPGEGEHKIMNYIRKIQKSKSRKITSLRHCLYGLDADLI 209
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPA-DWNGVDDTPI 297
ML L HE F++LRE + G P N + D+ D
Sbjct: 210 MLGLVAHENQFTLLREKLIWKGT--------------------PSSNKSVDFFKRKDN-F 248
Query: 298 HKKKYQFLNIWVLREYLQYELD-IPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEI 356
++ L I +LR+ L E F N ERIVDDF+F+C +GNDFLP +P L+I
Sbjct: 249 AGDEFHLLEISLLRDMLYLEFKPKERCEFDYNIERIVDDFIFICMLIGNDFLPSLPHLDI 308
Query: 357 REGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYE 416
G +NLL+ Y+ GYLT + + RVE F++ ++ +A E
Sbjct: 309 ASGGLNLLVRSYQEIQLKTKGYLTSKHRMHIGRVELFLEKIS-------------NEAEE 355
Query: 417 YNEAMKLNARRESSEELLQAPVAVADTVKLGEP-GYKERYYADK--FEISNPEEIDKVKK 473
+ K N +E EP YK+ YY+ K F+I + E DK
Sbjct: 356 FFFVQKKNFDKEK------------------EPWNYKKDYYSTKLMFDIFSKES-DKFLS 396
Query: 474 DVVLKYVEGLCWVCRYYYQDVC-SWQWFYPYHYAPFASDLKDLSDLEITFFLGEPFRPFD 532
++ Y+ GL W C YYY C SW W+YP +Y P ASDLK+L ++I F G PF P
Sbjct: 397 ILITNYIHGLNW-CLYYYHLGCPSWNWYYPEYYTPLASDLKNLYKIKINFTKGRPFEPLM 455
Query: 533 QLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEK 592
QL+ LP SSS LP+ + NLM +SPI FYP +++ID+NGK+ W+G+V LPFID+K
Sbjct: 456 QLLSVLPPNSSSFLPKSFENLMIQKNSPILNFYPLNYKIDLNGKKNLWEGIVVLPFIDQK 515
Query: 593 LLLRQTKKL--EVFLTEEELFRNSVMLDLLY 621
L K+ + E+E RN D+++
Sbjct: 516 KLSDAVKRYGKKQNFNEDEKIRNCFGKDVIF 546
>gi|160331478|ref|XP_001712446.1| dhm [Hemiselmis andersenii]
gi|159765894|gb|ABW98121.1| dhm [Hemiselmis andersenii]
Length = 553
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 251/632 (39%), Positives = 337/632 (53%), Gaps = 96/632 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP F+RWL++RYPL +VE EFD YLDMNGII
Sbjct: 1 MGVPKFFRWLSERYPLINQRLVENS----------------------EFDCFYLDMNGII 38
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
H C + K + +++F+ IF Y DH+F +VRPRKL+YLAIDGVAPRAKMNQQR+RRF
Sbjct: 39 HNCSQKEQKDNIQTEEELFQKIFSYTDHLFRIVRPRKLIYLAIDGVAPRAKMNQQRSRRF 98
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQ 180
R+ K E E+++ E KL +K + DSN ITPGT+FM LS + + +++
Sbjct: 99 RSVK-------ELEKIKTVVNETSKL--SKNEISFFDSNCITPGTEFMKNLSFSFKKWLE 149
Query: 181 ARLNQIPGW-QFTKVILSDANVPGEGEHKIMSYIR-LQRNLPGFDPNTRHCLYGLDADLI 238
++ P W Q VI S + VPGEGEHKIM+YIR +Q+ RHCLYGLDADLI
Sbjct: 150 NKIKFDPEWQQGCDVIFSGSEVPGEGEHKIMNYIRKIQKFNQNKSKTLRHCLYGLDADLI 209
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
ML L HE F++LRE + G Q+ KP D+ N H
Sbjct: 210 MLGLVAHENQFTLLREKLIWKGTQQNI---------------KPIDSLKKKNQPAGDEFH 254
Query: 299 KKKYQFLNIWVLREYLQYELDIPNP-PFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIR 357
L I +LR+ L E F N ERIVDDF+F+C +GNDFLP +P L I
Sbjct: 255 -----LLEISLLRDMLYLEFKPKESWRFTFNIERIVDDFIFMCMLIGNDFLPSLPHLSIA 309
Query: 358 EGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYEY 417
G +NLL+ Y+ GYLT ++ + RVE F++ ++ ++ F +
Sbjct: 310 SGGLNLLVRSYKEIQKDSKGYLTKKYQMHMGRVELFLEKISNEAEEFFFCQ--------- 360
Query: 418 NEAMKLNARRESSEELLQAPVAVADTVKLGEPGYKERYYADKFEI-----SNPEEIDKVK 472
+E+ + D YKE YY+ K + + + ++K+K
Sbjct: 361 ------------NEKNWGGNGSTLD--------YKESYYSSKLNLDYSSGKDKKRLEKLK 400
Query: 473 KDVVLKYVEGLCWVCRYYYQDVC-SWQWFYPYHYAPFASDLKDLSDLEITFFLGEPFRPF 531
D Y++GL W C YYY C SW WFYP +YAP SDLKDL ++I F G PF P
Sbjct: 401 SD----YIQGLNW-CLYYYHKGCPSWNWFYPEYYAPLTSDLKDLKKIKIKFTKGRPFEPL 455
Query: 532 DQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDE 591
QL+ LP SS LP + NLMTD SPI FYP +F++D+NGK+ W+GVV LPFID+
Sbjct: 456 IQLLSVLPPKSSIFLPLTFANLMTDKDSPILNFYPNNFKLDLNGKKNLWEGVVLLPFIDQ 515
Query: 592 KLLLRQTK--KLEVFLTEEELFRNSVMLDLLY 621
K L+ + L +EE RN D+++
Sbjct: 516 KKLIDTVNIYGRKESLCKEEKIRNCFGKDVVF 547
>gi|340054861|emb|CCC49169.1| putative 5'-3' exonuclease XRNA [Trypanosoma vivax Y486]
Length = 1411
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 242/639 (37%), Positives = 341/639 (53%), Gaps = 74/639 (11%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP F+RW+A+RYP I+ + PQ+D NLYLDMNGII
Sbjct: 1 MGVPKFFRWVAERYPSVIIPFRDFPPQID---------------------NLYLDMNGII 39
Query: 61 HPCFHP---DGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRT 117
H C HP D K + ++ KS+F Y++ +F ++PRK +LA+DGVAPRAKMNQQR
Sbjct: 40 HNCSHPNDVDAKHKAPTELEMAKSMFVYLEKLFNAIQPRKCFFLAVDGVAPRAKMNQQRQ 99
Query: 118 RRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQY 177
RR+R+ + A EE R E E+ + DSN ITPGT FM +S QY
Sbjct: 100 RRYRSGYELMIAR-EEALARGE--------EIPEEHDVFDSNCITPGTDFMVRISEHFQY 150
Query: 178 FIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADL 237
FI +++ P WQ +I S + PGEGEHKI+ +IR + PG+ PN HC+YGLDADL
Sbjct: 151 FITMKVSTDPAWQKCNIIYSGHDHPGEGEHKIVDFIRRNKMQPGYSPNESHCMYGLDADL 210
Query: 238 IMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPI 297
+ML+LATHE +F +LREV++ G E + Q K D NG +
Sbjct: 211 VMLALATHEPNFVLLREVVSF-GSSESRRLREQ----------KEADKA---NGF----V 252
Query: 298 HKKKYQFLNIWVLREYLQYELDI---------PNPPFPINFERIVDDFVFLCFFVGNDFL 348
K Y + +VL + P +FER+VDDFV +CFFVGNDFL
Sbjct: 253 VDKSYHVPDEFVLFHLNLLRDYLDLDLRDKVGAGLPVSYDFERVVDDFVLMCFFVGNDFL 312
Query: 349 PHMPTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKR 408
P +PTL I +G++ ++ +Y YLT+ G + VE +IQ +A E + R
Sbjct: 313 PSIPTLSINDGSLVHMLDIYASRVLKANMYLTEEGRINWRTVELWIQGLAELEFSTIKAR 372
Query: 409 TRIQQAYEYNEAMKLNARRESSEELLQAPVAVADTVK-LGEPGYKERYYADKFEISNP-E 466
++ Y+ + ARR+ S E AP + + L E YK+++Y +K N +
Sbjct: 373 EAKEKEYQ-----RQLARRDPSYE---APAVLTKNFESLNE--YKDQFYREKHGFDNGWD 422
Query: 467 EIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDL--EITFFL 524
K D+ L YVEGL WV YYY SW+WF+P+HYAP SDL +L + ++F +
Sbjct: 423 PQGKEIADLRLHYVEGLVWVYGYYYHGPPSWKWFFPHHYAPMVSDLVNLPAVANRVSFEV 482
Query: 525 GEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVV 584
GEPF P QL+ LP S LP Y L+ SP+ +++P +ID G R +W+G+V
Sbjct: 483 GEPFLPHQQLLAVLPPMSYRLLPRAYWPLLRSKGSPLARYFPEQLKIDREGARASWEGIV 542
Query: 585 KLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVH 623
+PFIDE+ LL ++ +T E+ N + L+ +
Sbjct: 543 LIPFIDERTLLAAFSSVQDRVTPEDRANNRLGKPTLFTY 581
>gi|300176532|emb|CBK24197.2| unnamed protein product [Blastocystis hominis]
Length = 1028
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 212/444 (47%), Positives = 287/444 (64%), Gaps = 19/444 (4%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEE-DPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGI 59
MGVP ++WLA +YP SI++ VEE VDG + P DVS PNPNG+EFDN Y+DMNGI
Sbjct: 1 MGVPTLFKWLAKKYPKSIMNCVEEFGTMVDGLYI--PPDVSLPNPNGIEFDNFYIDMNGI 58
Query: 60 IHPCFHPDG-KPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
IH C H +G P + D F+++F Y+D +F +VRPRKL+YLA+DGVAPRAKMNQQR+R
Sbjct: 59 IHNCSHNEGLDKVPETSKDTFENMFMYLDRLFEIVRPRKLIYLAVDGVAPRAKMNQQRSR 118
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RF A ++ + + E+ +R AGK + + + DSN ITPGT++M + L+++
Sbjct: 119 RFSAFQERQDRKDAEDEIRSRMLAAGKKVPPP-RTSSFDSNKITPGTEYMMEICDNLRWY 177
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
I R++ P WQ VILSD +VPGEGEHKIM YIR +R PG+DPNT+H ++GLDADLI
Sbjct: 178 IADRMSHNPAWQNVTVILSDGSVPGEGEHKIMDYIRRERAQPGYDPNTKHIIHGLDADLI 237
Query: 239 MLSLATHEIHFSILREVITLPG-QQEKCFVCGQVGHLAAECHGKPGDNPADWNGVD-DTP 296
ML LATHE +F ILRE +T Q +C +CG GHLAA+C GK P + ++
Sbjct: 238 MLGLATHEAYFYILREEVTSSTLQVTRCALCGSDGHLAAQCQGK---KPQPRGALTRESK 294
Query: 297 IHKKKYQFLNIWVLREYLQYELDIPNP--PFPINFERIVDDFVFLCFFVGNDFLPHMPTL 354
K+ Q L + VLREYLQ E + FP +FE ++DD V LCF VGNDFLP +P L
Sbjct: 295 YMKQPLQILQLPVLREYLQGEFGLLERVISFPYDFEHVLDDIVLLCFLVGNDFLPRLPCL 354
Query: 355 EIREGAINLLMHVYRREFTAMGGYLT-DAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQ 413
IREGA++LL ++Y+ A GYLT D G++ L R+ + + +A E +I ++R I
Sbjct: 355 SIREGALDLLFNLYKSILPAERGYLTADGGKIDLPRLHRIFEELAKVEGEILRRRRWI-- 412
Query: 414 AYEYNEAMKLNARRESSEELLQAP 437
N + AR ++ LL+AP
Sbjct: 413 ----NRDNQQRARAARTDHLLKAP 432
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 84/226 (37%), Positives = 122/226 (53%), Gaps = 8/226 (3%)
Query: 406 QKRTRIQQAYEYNEAMKLNARRESSEELLQAPVAVADTVKLGEPGYKERYYADKFEISNP 465
+++ +I+ Y E +K +R + + +V DT++LGE G+K+RYY +KF
Sbjct: 534 EEKDKIEMEYFSLEFLKEWKKRNTDD-------SVQDTIRLGEEGWKQRYYREKFCRKPG 586
Query: 466 EEIDKV-KKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDLEITFFL 524
+ +D + + YVEGL W+ YYY+ SW WF+P+H+AP AS L + S F
Sbjct: 587 DRLDGAFYRSICTSYVEGLRWIMLYYYKGCPSWDWFFPFHFAPCASTLAEFSYEATPFKE 646
Query: 525 GEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVV 584
G+PFRP DQLM P + LP+ ++ LMT P+SPI FYP + D +G F W
Sbjct: 647 GKPFRPLDQLMANQPPGCAYLLPKPFQELMTSPNSPIRDFYPKRIEYDTDGLPFRWLWTA 706
Query: 585 KLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVHPQHPLYQ 630
+ FID+ LL + LT +L RN V +DLL V P Q
Sbjct: 707 LISFIDKDRLLAAIDSVMDQLTPADLIRNHVGVDLLCVRRSIPEVQ 752
>gi|320584179|gb|EFW98390.1| 5'-3' exoribonuclease, putative [Ogataea parapolymorpha DL-1]
Length = 967
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 202/407 (49%), Positives = 276/407 (67%), Gaps = 16/407 (3%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPA +RWL+ +YP I V+EE+P V G+ V +PV S PNPNG E DNLYLDMNGI+
Sbjct: 1 MGVPALFRWLSRKYPKIISPVIEEEPIVVGD-VEQPVQYSNPNPNG-ELDNLYLDMNGIV 58
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ KP P + ++ IF Y D + + RPRKLL +A+DGVAPRAKMNQQR+RRF
Sbjct: 59 HPCSHPENKPPPETEAEMMVEIFRYTDRVLNMARPRKLLMIAVDGVAPRAKMNQQRSRRF 118
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLS-AKEKPETCDSNVITPGTQFMAVLSAALQYFI 179
R+A+DAA A+ E ER +E E G+ + A + ++ DSN ITPGT FM +L+ +L+Y++
Sbjct: 119 RSARDAALAQEELERQIQEREMRGEEIDLAIKGKKSWDSNSITPGTPFMDILARSLRYWV 178
Query: 180 QARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIM 239
+L PGW +VI+SDA VPGEGEHKIM++IR QR+ P ++PNT HC+YGLDADLI
Sbjct: 179 AYKLANDPGWASLQVIISDATVPGEGEHKIMNFIRSQRSDPEYNPNTTHCIYGLDADLIF 238
Query: 240 LSLATHEIHFSILREVITLPGQ-QEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
L LATHE HF +LRE + Q Q + + QV A AD
Sbjct: 239 LGLATHEPHFKVLREDVFAKDQAQRQLKLADQVNMDEATRQRLLA---AD---------Q 286
Query: 299 KKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIRE 358
KK + +L++ +LREYL+ EL+IP F + ER +DD+VF+CFFVGNDFLPH+P+L++R+
Sbjct: 287 KKPFLWLHVSILREYLEVELNIPRLSFNFDLERAIDDWVFMCFFVGNDFLPHLPSLDVRD 346
Query: 359 GAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIF 405
I++L+ +++R +M YLT G++ L+ VE + +A ED+IF
Sbjct: 347 NGIDILVDIWKRVLPSMKDYLTCDGKLNLEGVETLMSHLAQKEDEIF 393
Score = 215 bits (548), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 99/193 (51%), Positives = 134/193 (69%)
Query: 430 SEELLQAPVAVADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRY 489
SE+ + D+++L EPGYK RYY KFE ++ EEI+K++KD+V YVEG+ W Y
Sbjct: 533 SEQSDAEVIDTTDSIRLWEPGYKTRYYQQKFETTDAEEIEKIRKDMVRCYVEGISWALLY 592
Query: 490 YYQDVCSWQWFYPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEK 549
Y+Q SW W+YPYHYAPFA+D +LSD+++ F G PFRPF+QLM LPAAS LPE
Sbjct: 593 YFQGCPSWNWYYPYHYAPFAADFTNLSDIKVEFKQGTPFRPFEQLMSVLPAASGHNLPEV 652
Query: 550 YRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEE 609
+R LM++P S I FYP DF+IDMNG + AWQG+ LPFIDE LL+ ++ LTE E
Sbjct: 653 FRPLMSEPHSEIIDFYPTDFKIDMNGAKMAWQGICLLPFIDETRLLKTVREKYSELTEYE 712
Query: 610 LFRNSVMLDLLYV 622
+ RN+ ++L++
Sbjct: 713 IERNTNRNEVLFL 725
>gi|366995071|ref|XP_003677299.1| hypothetical protein NCAS_0G00590 [Naumovozyma castellii CBS 4309]
gi|342303168|emb|CCC70946.1| hypothetical protein NCAS_0G00590 [Naumovozyma castellii CBS 4309]
Length = 1012
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 206/431 (47%), Positives = 282/431 (65%), Gaps = 27/431 (6%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP+F+RWL+ +YP I V+EE PQV +GV P+D S PNPNG E DNLYLDMNGI+
Sbjct: 1 MGVPSFFRWLSRKYPKIISPVLEETPQVI-DGVTLPLDYSAPNPNG-ELDNLYLDMNGIV 58
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ +P P + D++ ++F+Y + + + RPRK+L +A+DGVAPRAKMNQQR RRF
Sbjct: 59 HPCSHPENRPPPETEDEMLLAVFEYTNRVLNMARPRKVLVMAVDGVAPRAKMNQQRARRF 118
Query: 121 RAAKDAA-EAEAEEERLRKEFEEAGKLL-SAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
R+A+DAA E EA EE LR++ EE G+++ A + +T DSN ITPGT FM L+A+L+Y+
Sbjct: 119 RSARDAAIENEAREEILRQK-EEIGEVIDEAVKNKKTWDSNAITPGTPFMDKLAASLRYW 177
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
+L PGW+ ++I+SDA VPGEGEHKIM++IR QR P ++PNT HC+YGLDADLI
Sbjct: 178 TAFKLATDPGWKNLQIIISDATVPGEGEHKIMNFIRSQRADPEYNPNTTHCIYGLDADLI 237
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECH---GKPGDNPADWNGVDDT 295
L LATHE HF ILRE + ++ + E K + P W
Sbjct: 238 FLGLATHEPHFRILREDVFAQNNNKRRNFDDTLNMSEEEKQLLLAKDSEKPFLW------ 291
Query: 296 PIHKKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLE 355
L+I VLREYL EL IP FP + ER +DD+VF+CFF GNDFLPH+P+L+
Sbjct: 292 ---------LHINVLREYLGAELFIPRLSFPFDLERAIDDWVFMCFFCGNDFLPHLPSLD 342
Query: 356 IREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKR----TRI 411
+RE +I++L+ +++ + Y+T GE+ L+ VE +Q + E IF+ R R
Sbjct: 343 VRENSIDILLDIWKIVLPNLKTYMTCDGELNLESVEMLLQQLGSREGDIFKSRHIQEVRK 402
Query: 412 QQAYEYNEAMK 422
Q+AY+ + K
Sbjct: 403 QEAYQRKKLQK 413
Score = 201 bits (512), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 116/280 (41%), Positives = 167/280 (59%), Gaps = 14/280 (5%)
Query: 419 EAMKLNARRESSEELLQAPV--AVADT---VKLGEPGYKERYYADKFEISNPEEIDKVKK 473
E K + ES + PV V DT VKL EPG++ERYY K +S+ E I+ ++K
Sbjct: 564 EESKTTSENESVPAVSLGPVKSGVIDTDEAVKLYEPGFRERYYKAKCYVSDAE-IEPLRK 622
Query: 474 DVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQ 533
+V YVEG+ WV YYYQ SW W+YPYHYAPFASD D++++++ F LG+PF P++Q
Sbjct: 623 GMVRSYVEGVSWVLLYYYQGCASWDWYYPYHYAPFASDFFDITNIKVEFELGKPFLPYEQ 682
Query: 534 LMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKL 593
LM LPAAS LP +R LM++P SPI FYP +F IDMNGK+ +WQG+ LPFIDEK
Sbjct: 683 LMSVLPAASGHTLPAIFRPLMSEPDSPIIDFYPTEFPIDMNGKKMSWQGISLLPFIDEKR 742
Query: 594 LLRQTKKLEVFLTEEELFRNSVMLDLLYVHPQHPLYQQITLYCQLYHQLPPQDRFAWEID 653
LL + LT E RN +L + ++ +++ T + +++ +D +
Sbjct: 743 LLETVRDQYPKLTPAERSRNVCNDPVLLISNKNANFERFT---KKFYKTENEDEVSEFTF 799
Query: 654 VNASGGMNGYIWLCERNGLR--SIIPSPVK--GLPDIERN 689
+ G++G + ++ G + S I SPV+ GLPD+ N
Sbjct: 800 HHFKSGLSGVV-SADKEGFKLGSKIVSPVQGGGLPDLSTN 838
>gi|254571933|ref|XP_002493076.1| Nuclear 5' to 3' single-stranded RNA exonuclease, involved in RNA
metabolism [Komagataella pastoris GS115]
gi|238032874|emb|CAY70897.1| Nuclear 5' to 3' single-stranded RNA exonuclease, involved in RNA
metabolism [Komagataella pastoris GS115]
gi|328352909|emb|CCA39307.1| 5'-3' exoribonuclease 2 [Komagataella pastoris CBS 7435]
Length = 994
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 200/440 (45%), Positives = 284/440 (64%), Gaps = 22/440 (5%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPA +RWL+ +YP I+ V +D VD +G +RP PNPNG E DNLYLDMNGI+
Sbjct: 1 MGVPALFRWLSRKYP-KIISPVIQDEDVDIDGESRPTRYEDPNPNG-ELDNLYLDMNGIV 58
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ KP P + D++ +F Y +++ ++ RPRK++Y+A+DGVAPRAKMNQQR+RRF
Sbjct: 59 HPCSHPEHKPVPETEDEMMLDVFAYTENVIMMARPRKVIYIAVDGVAPRAKMNQQRSRRF 118
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLS-AKEKPETCDSNVITPGTQFMAVLSAALQYFI 179
R+A+DA +A ++ KE E+ G+++ A + +T DSN ITPGT FM L+ +L+Y+
Sbjct: 119 RSAQDAKDANEKKAAELKEMEKKGEIIDDAIKNKKTWDSNAITPGTPFMHRLADSLRYWA 178
Query: 180 QARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIM 239
+L PGW +VI+SDA+VPGEGEHKIMSY+R R+ P DPNT HC+YGLDADLI
Sbjct: 179 AYKLTTDPGWSGIEVIISDASVPGEGEHKIMSYVRSLRSSPKHDPNTTHCIYGLDADLIF 238
Query: 240 LSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIHK 299
L LATHE HF ILRE + Q +K + + ++ +
Sbjct: 239 LGLATHEPHFKILREDVF--AQDKKSYSL---------------QDQLRMTDIERQELKD 281
Query: 300 KKYQF--LNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIR 357
KK F L++ +LREYLQ EL++P FP + E+ +DD+VF+CFF GNDFLPH+P+L++R
Sbjct: 282 KKTPFLWLHLNILREYLQIELNVPGLSFPFDLEKSIDDWVFICFFCGNDFLPHLPSLDVR 341
Query: 358 EGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYEY 417
+ +I L+ ++++ M GYLT G + L VE+ + +A ED IF+KR ++
Sbjct: 342 DNSITTLVTIWKQILPTMKGYLTTDGYLNLPAVERLLAELAKKEDYIFRKRYEDEKRSLE 401
Query: 418 NEAMKLNARRESSEELLQAP 437
N+ + A+ +SS AP
Sbjct: 402 NQKRRKLAQEQSSARSQNAP 421
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 112/265 (42%), Positives = 167/265 (63%), Gaps = 16/265 (6%)
Query: 428 ESSEELLQAPVAVADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVC 487
+SS E+L + + ++L EPGY++RYY KF +P+++ K+ +++V KY+EG+ WV
Sbjct: 522 DSSTEIL---IPKNEEIRLWEPGYRKRYYETKFHTKDPQKVKKIARNMVQKYIEGVSWVL 578
Query: 488 RYYYQDVCSWQWFYPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALP 547
YYYQ SW W+YPYHYAPFA+D +LS+L+I F G PFRP++QLM LPAASS LP
Sbjct: 579 LYYYQGCPSWNWYYPYHYAPFAADFVNLSELKIEFVEGTPFRPYEQLMSVLPAASSHNLP 638
Query: 548 EKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTE 607
+ +R+LM+D +S I FYP +F +DMNGK+ WQ + LPFIDE LL+ + LTE
Sbjct: 639 DVFRSLMSDANSEIIDFYPEEFPLDMNGKKVIWQAIPLLPFIDENRLLKAVQSKYDQLTE 698
Query: 608 EELFRNSVMLDLLYVHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVNASGGMNGYIWLC 667
+E FRN+ ++L + H Y TL +LY + +D + +++D + G+ +
Sbjct: 699 DEKFRNTNRSEILVLGRSHSHYP--TLVKELYEE--GKDSYEFQVDSSGVSGVAIKLQSF 754
Query: 668 ERNGLRSIIPSPVKGL------PDI 686
+R+G ++ PVK L PDI
Sbjct: 755 DRSG---VLRLPVKQLEGYRHYPDI 776
>gi|367010234|ref|XP_003679618.1| hypothetical protein TDEL_0B02780 [Torulaspora delbrueckii]
gi|359747276|emb|CCE90407.1| hypothetical protein TDEL_0B02780 [Torulaspora delbrueckii]
Length = 1030
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 200/448 (44%), Positives = 288/448 (64%), Gaps = 18/448 (4%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP+F+RWL+ +YP I V+EE PQV +GV P+D + PNPNG E DNLYLDMNGI+
Sbjct: 1 MGVPSFFRWLSRKYPKIISPVLEEQPQV-VDGVTLPIDYAAPNPNG-ELDNLYLDMNGIV 58
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ KP P + D++ ++F+Y + + + RPRK+L +A+DGVAPRAKMNQQR+RRF
Sbjct: 59 HPCSHPENKPPPETEDEMLLAVFEYTNRVLNMARPRKVLMIAVDGVAPRAKMNQQRSRRF 118
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLL--SAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
R+A+DA E++ +E E+ G+ + S K K +T DSN ITPGT FM L+AAL+Y+
Sbjct: 119 RSARDAQVENEAREQVMREREQVGEFIDDSVKNK-KTWDSNAITPGTPFMDKLAAALRYW 177
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
I +L+ PGW+ +VI+SDA VPGEGEHKIM+++R QR P ++PNT HC+YGLDADLI
Sbjct: 178 ISFKLSTDPGWKNLQVIISDATVPGEGEHKIMNFVRSQRADPQYNPNTTHCIYGLDADLI 237
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
L LATHE HF ILRE + +++ + E +
Sbjct: 238 FLGLATHEPHFKILREDVFAQNNRKRHNFTDSLNMTEEEKQLIAKQD------------S 285
Query: 299 KKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIRE 358
+K + +L+I VLREYL EL +P P N ER +DD+VF+CFF GNDFLPH+P+L++RE
Sbjct: 286 EKPFLWLHISVLREYLAAELWVPKLSMPFNLERAIDDWVFMCFFCGNDFLPHLPSLDVRE 345
Query: 359 GAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYEYN 418
+I++L+ +++ ++ Y+T GE+ L VE + + E IF+ R IQ+ +
Sbjct: 346 NSIDILLDIWKVVLPSLKSYMTCDGELNLQSVEMLLGQLGAREGDIFKTR-HIQEVRKQE 404
Query: 419 EAMKLNARRESSEELLQAPVAVADTVKL 446
+ +R S+ + P ++ ++L
Sbjct: 405 AIQRRKLQRNVSKGQDRHPTVPSEQLQL 432
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 93/190 (48%), Positives = 125/190 (65%), Gaps = 1/190 (0%)
Query: 444 VKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPY 503
VKL EPGY+ERYY KF I EI+ ++KD+V +YVEG+ WV YYYQ SW W+YPY
Sbjct: 605 VKLYEPGYRERYYVAKFNIKE-SEIEALRKDLVRRYVEGVSWVLAYYYQGCASWDWYYPY 663
Query: 504 HYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYK 563
HYAPFASD ++D+++ F GEP P++QLM LPAAS+ LP ++ LM++P S I
Sbjct: 664 HYAPFASDFFGIADMKVEFEEGEPILPYEQLMSVLPAASAHTLPSIFKPLMSEPDSEIID 723
Query: 564 FYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVH 623
FYP +F IDMNGK+ +WQG+ LPFI+ K LLR + LTE E RN +L +
Sbjct: 724 FYPTEFPIDMNGKKMSWQGIALLPFIEAKRLLRVVRNQYSRLTEYERSRNVCKEPVLLIS 783
Query: 624 PQHPLYQQIT 633
++ Y++
Sbjct: 784 NKNVNYEKFA 793
>gi|367005296|ref|XP_003687380.1| hypothetical protein TPHA_0J01240 [Tetrapisispora phaffii CBS 4417]
gi|357525684|emb|CCE64946.1| hypothetical protein TPHA_0J01240 [Tetrapisispora phaffii CBS 4417]
Length = 1113
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 208/453 (45%), Positives = 299/453 (66%), Gaps = 23/453 (5%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP+F+RWL+ +YP I V+EE PQ+ +GVA P+D S NPNG E DNLYLDMNGI+
Sbjct: 1 MGVPSFFRWLSRKYPKIISPVLEETPQI-VDGVALPIDYSSENPNG-ELDNLYLDMNGIV 58
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ +P P + D++ ++F+Y + + + RPRK+L +A+DGVAPRAKMNQQR RRF
Sbjct: 59 HPCSHPENRPPPETEDEMLLAVFEYTNRVLNMARPRKVLMIAVDGVAPRAKMNQQRARRF 118
Query: 121 RAAKDAA-EAEAEEERLRKEFEEAGKLLS-AKEKPETCDSNVITPGTQFMAVLSAALQYF 178
R+A+DA E EA EE L K+ E AG+++ A ++ +T DSN ITPGT FM L+AAL+Y+
Sbjct: 119 RSARDAKFENEAREEIL-KDKEAAGQVIDEAVKQKKTWDSNAITPGTPFMDKLAAALRYW 177
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
+L+ PGW+ +VI+SDA VPGEGEHK+M++IR QR P ++PNT HC+YGLDADLI
Sbjct: 178 TAFKLSTDPGWKNLQVIISDATVPGEGEHKLMNFIRAQRADPEYNPNTTHCIYGLDADLI 237
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPG-DNPADWNGVDDTPI 297
L LATHE HF ILRE + G + K + + K G D + +
Sbjct: 238 FLGLATHEPHFKILREDVFAQGSKPK------------KHNFKDGLDMTEEEKQLITKED 285
Query: 298 HKKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIR 357
+K + +L+I VLREYL EL +P FP + ER +DD+VF+CFF GNDFLPH+P L++R
Sbjct: 286 SQKPFLWLHINVLREYLSAELWVPRLSFPFDIERAIDDWVFMCFFCGNDFLPHLPCLDVR 345
Query: 358 EGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKR----TRIQQ 413
E +I++L+ +++R + Y+T GE+ L+ VE + + E IF+ R R ++
Sbjct: 346 ENSIDILLDIWKRILPNLKTYMTCDGELNLESVELLLSQLGSREADIFKTRHLQEVRKKE 405
Query: 414 AYEYNEAMKLNARRESSEELLQAPVAVADTVKL 446
+ E + +++ R+ S+ + P V + ++L
Sbjct: 406 SMERKKQQRID-RKNISKGQDRHPTNVTEQLQL 437
Score = 213 bits (542), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 100/202 (49%), Positives = 134/202 (66%), Gaps = 1/202 (0%)
Query: 430 SEELLQAPVAVADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRY 489
+ + + + D VKL EPG++ERYYA KF + + +ID++KKDVV Y+EG+ WV Y
Sbjct: 607 NSDTVSGVIDTDDYVKLYEPGFRERYYASKFNV-DEHDIDQLKKDVVRYYIEGVSWVLLY 665
Query: 490 YYQDVCSWQWFYPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEK 549
YYQ SW W+YPYHYAPFA+D +L+D+ I F LGEPF PF+QLM +PAAS LPE
Sbjct: 666 YYQGCASWNWYYPYHYAPFAADFTNLTDISIKFDLGEPFLPFEQLMSVMPAASGHTLPEI 725
Query: 550 YRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEE 609
+R LM+DP S I FYP F IDMNGK+ +WQG+ LPFIDE LL+ + FL+++E
Sbjct: 726 FRPLMSDPKSEIIDFYPEQFPIDMNGKKMSWQGIALLPFIDETRLLKAVRSKYEFLSDQE 785
Query: 610 LFRNSVMLDLLYVHPQHPLYQQ 631
RN +L + ++ Y Q
Sbjct: 786 KSRNVRKKAILVISNKNANYDQ 807
>gi|66819171|ref|XP_643245.1| 5'-3' exoribonuclease [Dictyostelium discoideum AX4]
gi|60471408|gb|EAL69368.1| 5'-3' exoribonuclease [Dictyostelium discoideum AX4]
Length = 1749
Score = 390 bits (1003), Expect = e-105, Method: Compositional matrix adjust.
Identities = 236/665 (35%), Positives = 349/665 (52%), Gaps = 111/665 (16%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP F+RW+++RYP + +++ +P E+DNLYLDMNGII
Sbjct: 1 MGVPRFFRWVSERYPQILQKILDSNPP--------------------EYDNLYLDMNGII 40
Query: 61 HPCFHPDGKP-APTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRR 119
H C S +++ + + +Y+D +F +RP KL Y+AIDGVAPR+K+NQQR RR
Sbjct: 41 HACSQEFANSLIEFSEEELIRQVCNYVDRLFHTIRPTKLFYMAIDGVAPRSKINQQRQRR 100
Query: 120 FRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETC-DSNVITPGTQFMAVLSAALQYF 178
F + +E+L+++ GK + PE + ITPGTQFM LS ++Q++
Sbjct: 101 FLSVH-------RDEKLKQKLISEGKPV-----PEVIFNRTAITPGTQFMYNLSESIQFY 148
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
I+ ++++ W+ +VI S PGEGEHKI+ YIR + P +D N HCLYGLDADLI
Sbjct: 149 IKKKISEDLSWREVRVIFSGPENPGEGEHKIIDYIRKNKASPDWDANQSHCLYGLDADLI 208
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
+L L THE +FSILRE I+ KP D
Sbjct: 209 LLGLITHEPNFSILREEISF----------------------KPTKRQLD---------- 236
Query: 299 KKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIRE 358
+Q L+I +LREYL EL + F + ERI+DDF+ + F GNDFLPH+P LEI +
Sbjct: 237 ---FQLLHISLLREYLDLELRNDDLEFGYDLERIIDDFILIMIFFGNDFLPHLPFLEISK 293
Query: 359 GAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQ------------ 406
G +N + +Y+ ++GGYLT+ + L+R++ F + + +E + Q
Sbjct: 294 GGLNSIFELYKSSLPSLGGYLTEGATIDLERLQHFFKFLQKFEKKQQQGIMGSTEEDLDD 353
Query: 407 KRTRIQQAYE----YNEAMKLNARRESSE---ELLQAPVAVADTVKLGEPGYKERYYADK 459
K+ + + E ++ + A++E E L++ V+D+ + GE E+ +
Sbjct: 354 KKVEVAELVEDSVLEHDGLDEEAKKEFERLAMERLKSHFPVSDS-EDGEEDPDEQLVNEL 412
Query: 460 FEISNP-------------EEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYA 506
+ + N +EI K+ VVL YVEGL WV YY+ SW WFYP++YA
Sbjct: 413 YNVENSYYRQYFNEFPNTLDEIKAFKEKVVLSYVEGLVWVLNYYHNGCISWVWFYPFYYA 472
Query: 507 PFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYP 566
P A D ++ DL I F GEP PF QL+ LP S +P+ Y+ LM D SPI FYP
Sbjct: 473 PLAIDFNNIPDLHIDFQPGEPITPFQQLLSVLPPQSVDLIPKSYQTLMLDLFSPIIDFYP 532
Query: 567 PDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFL--------TEEELFRNSVMLD 618
+F+ID + + G+ +L FID + LL T ++ L T+EE RNS+
Sbjct: 533 VEFEIDTKDPHY-FDGIAELGFIDHQRLLDATASIKKSLAQSGQKVFTDEEEARNSIKNA 591
Query: 619 LLYVH 623
++ H
Sbjct: 592 VIIYH 596
>gi|403224058|dbj|BAM42188.1| exoribonuclease [Theileria orientalis strain Shintoku]
Length = 1230
Score = 390 bits (1002), Expect = e-105, Method: Compositional matrix adjust.
Identities = 228/582 (39%), Positives = 325/582 (55%), Gaps = 84/582 (14%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEE--DPQVD-GEGVARPVDVSKPNPNGMEFDNLYLDMN 57
MGVP FYRWL +RYP D+V+ D +D + +D+ PNPNG EFDNLYLDMN
Sbjct: 1 MGVPTFYRWLCNRYPRVPKDLVDNYNDRNLDLSDEDQVGLDLLSPNPNG-EFDNLYLDMN 59
Query: 58 GIIHPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRT 117
GIIHPC HP+ P S + +FK I +YID IF LVRPRKL+YLAIDGVAPRAK+NQQR+
Sbjct: 60 GIIHPCCHPENMEQPESEEIMFKCIVEYIDRIFYLVRPRKLIYLAIDGVAPRAKINQQRS 119
Query: 118 RRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQY 177
RRF++A A + E++ KE+ E + + DSNVITPGT+FM LS +
Sbjct: 120 RRFKSAALADLEDETYEKMLKEYLEKKNDMEIPVRKNKWDSNVITPGTEFMYKLSNKIVE 179
Query: 178 FIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADL 237
+I+ R+ + W+ VI SD+NVPGEGEHKIM +IR QR+ P +DPNT+H L+G+DADL
Sbjct: 180 YIKERVEKYDAWRRIVVIFSDSNVPGEGEHKIMEFIRSQRHCPDYDPNTKHVLHGMDADL 239
Query: 238 IMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLA------AECHGKPGDNPADWNG 291
IML L THE +F ILRE++T F +A E G+ P N
Sbjct: 240 IMLGLTTHEPNFYILREIVT--------FYVHPSNKIAPKEFELEEPEGRSALAPKADNM 291
Query: 292 VDDTPIHK------KKYQFLNIWVLREYLQYELDIP---NPPFPINFERIVDDFVFLCFF 342
+ K K Q L + VLREYL ++L + I+FER VDD V + FF
Sbjct: 292 SKEEKYMKMMRENWKPLQLLQLAVLREYLSHQLRFVTGFDNGSSIDFERCVDDLVLMIFF 351
Query: 343 VGNDFLPHMPTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYED 402
GNDFLP++P++ I G+I+ ++ +Y++ ++ YL++ G + + F ++ E+
Sbjct: 352 CGNDFLPNLPSISITGGSIDQMILLYQKLLPSLNDYLSNEGNLNFHSISTFFHYLSKIEN 411
Query: 403 QIFQKRTRIQQAYEY------------------------NEAMKL--------------N 424
+ F +Q YEY NE K+ +
Sbjct: 412 ETF------KQIYEYKKKSEEYHKNRSQVNPRGTTHRPENEVTKVTDGGKEGVFGGENGS 465
Query: 425 ARRESSEELLQA------------PVAVADTVKLGEPG-YKERYYADKFEISNPEEIDKV 471
+++ E+ ++ V ++ V L +P +KE YY +KF ++ +++ +
Sbjct: 466 VNKDAEEDFMKRYEEELNKLKSVDEVKLSVDVTLNDPRLWKEAYYREKFHLTEEDDMKEF 525
Query: 472 KKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLK 513
++V Y++G+CWV RYYYQ SW W+YPYHY+PF SDL+
Sbjct: 526 VQEVSFHYIKGICWVLRYYYQGCPSWSWYYPYHYSPFCSDLE 567
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 53/106 (50%), Positives = 66/106 (62%)
Query: 520 ITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFA 579
I F G P PF QLMG +P SS +PE R LMTDP SP+ FYP FQ D NGKR+
Sbjct: 728 IKFDYGTPLTPFQQLMGVMPIRSSHCIPESLRGLMTDPESPLRDFYPVKFQEDPNGKRYK 787
Query: 580 WQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVHPQ 625
+Q V LPFIDE+ LL K +E L EEE +RN V +++++ Q
Sbjct: 788 YQWVALLPFIDEEKLLHYVKPIEEKLNEEEKYRNRVSKNIIFLTQQ 833
>gi|294899194|ref|XP_002776531.1| 5'-3' exoribonuclease, putative [Perkinsus marinus ATCC 50983]
gi|239883563|gb|EER08347.1| 5'-3' exoribonuclease, putative [Perkinsus marinus ATCC 50983]
Length = 421
Score = 390 bits (1002), Expect = e-105, Method: Compositional matrix adjust.
Identities = 207/405 (51%), Positives = 270/405 (66%), Gaps = 20/405 (4%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVE----EDPQVDGEGVAR---PVDVSKPNPNGMEFDNLY 53
MGVP F+RWL RYP I D VE E P G+G PVD +PNPNG+EFDNLY
Sbjct: 1 MGVPTFFRWLCTRYPKVIKDAVEKVCIEVPGEGGDGANTYDVPVDFEEPNPNGIEFDNLY 60
Query: 54 LDMNGIIHPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMN 113
LD+NGIIHPC HP+ P + D +F +I Y+D + +VRPRKLLY+AIDGVAPRAKMN
Sbjct: 61 LDLNGIIHPCCHPEDGMTPENEDVMFLNIMRYVDRLVRIVRPRKLLYVAIDGVAPRAKMN 120
Query: 114 QQRTRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSA 173
QQR RRF+AA++A E EEE+LR++ + G+ +K K DSNVITPGT F+ ++
Sbjct: 121 QQRARRFKAAQEATEQMKEEEKLRRQMVKEGREPPSK-KGVPWDSNVITPGTPFLDKVAH 179
Query: 174 ALQYFIQARLNQIPGWQFT--KVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLY 231
L ++I R+ P WQ + ILSDA PGEGEHKIM +IR QR + G++PNT H LY
Sbjct: 180 MLHWYISDRMTNDPLWQLLGFRCILSDAGSPGEGEHKIMDFIRKQRMMEGYNPNTTHMLY 239
Query: 232 GLDADLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGD-NPADWN 290
G DADLIML LATHEI F I+REV+ P ++ KC++CG+VGHL +EC G + D +
Sbjct: 240 GADADLIMLGLATHEISFYIIREVVLKP-EERKCYLCGKVGHLPSECTGDDQQPDLGDES 298
Query: 291 GVDDTPIHKKKYQFLNIWVLREYLQYELDI----PNP----PFPINFERIVDDFVFLCFF 342
D+ + K +Q +++ VLREYL + PN PFP + ER++DDFVF+CFF
Sbjct: 299 EEDEDMLEMKPFQIISLPVLREYLVEQFTTAFCPPNQKCILPFPFDVERVIDDFVFMCFF 358
Query: 343 VGNDFLPHMPTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLL 387
VGNDFLPH+P+L IR+G+I+ ++ +Y + YLT GEV L
Sbjct: 359 VGNDFLPHLPSLNIRDGSIDQMICLYVEILPTLTDYLTCQGEVNL 403
>gi|294657829|ref|XP_460123.2| DEHA2E18898p [Debaryomyces hansenii CBS767]
gi|218512153|sp|Q6BNU7.4|XRN2_DEBHA RecName: Full=5'-3' exoribonuclease 2
gi|199432980|emb|CAG88393.2| DEHA2E18898p [Debaryomyces hansenii CBS767]
Length = 1003
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 205/430 (47%), Positives = 288/430 (66%), Gaps = 21/430 (4%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGE-GVARPVDVSKPNPNGMEFDNLYLDMNGI 59
MGVPA +RWL+ +YP I VVE+D V E G A+ S PNPNG E DNLYLDMNGI
Sbjct: 1 MGVPALFRWLSRKYPKIISPVVEDD--VTQEIGAAQ---FSDPNPNG-ELDNLYLDMNGI 54
Query: 60 IHPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRR 119
+HPC HP+ K P + D++F +F Y D + L+ RPRK+L +A+DGVAPRAKMNQQR+RR
Sbjct: 55 VHPCSHPEHKLPPETEDEMFLDVFKYTDRVLLMARPRKVLMIAVDGVAPRAKMNQQRSRR 114
Query: 120 FRAAKDAAEAEAEEERLRKEFEEAGKLLS-AKEKPETCDSNVITPGTQFMAVLSAALQYF 178
FR+A+DA A E+ER +E E G+ + A + ++ DSN ITPGT FM L+ AL+Y+
Sbjct: 115 FRSAQDAKIAHEEKERQIRERESRGESIDDAIKGKKSWDSNAITPGTPFMDSLAQALRYW 174
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
+ +L PGW +VI+SDA VPGEGEHK+MS+IR QR+ P +DPNT+HC+YGLDADLI
Sbjct: 175 VAYKLATDPGWANLQVIISDATVPGEGEHKLMSFIRSQRSDPEYDPNTKHCIYGLDADLI 234
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
L LATHE HF +LRE + Q + + Q+ + D+ A+ +
Sbjct: 235 FLGLATHEPHFRVLREDV-FANQSRQMRISDQLSMTQDQ-----KDSIAEQDA------- 281
Query: 299 KKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIRE 358
KK + +L++ VLREYL+ EL P+ FP + ER +DD+VF+CFFVGNDFLPH+P+L++R+
Sbjct: 282 KKPFLWLHVNVLREYLEIELYNPHLSFPFDLERAIDDWVFMCFFVGNDFLPHLPSLDVRD 341
Query: 359 GAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYEYN 418
I++L++ ++R + Y+T G + L+ VEK + S++ ED+IF+KR ++ E N
Sbjct: 342 NGIDILVNCWKRMLPKLRDYITCDGNLNLESVEKLLSSLSYKEDEIFRKRHEGEKRREEN 401
Query: 419 EAMKLNARRE 428
+ + A+ E
Sbjct: 402 DKRRKLAQEE 411
Score = 218 bits (555), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 105/213 (49%), Positives = 146/213 (68%), Gaps = 6/213 (2%)
Query: 431 EELLQAPVAVADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYY 490
E L P D+V++ EPGY++RYY KF + + EEI+K+++D+V Y+EG+ WV YY
Sbjct: 526 EAELPKPDENGDSVRMWEPGYRQRYYQSKFGVVSEEEINKIRRDMVRCYLEGISWVLLYY 585
Query: 491 YQDVCSWQWFYPYHYAPFASDLKDLSDL----EITFFLGEPFRPFDQLMGTLPAASSSAL 546
YQ SWQW+YPYHYAPFA+D +++D+ I F LGEPF+P++QLM LPAAS L
Sbjct: 586 YQGCPSWQWYYPYHYAPFAADFVNINDIIGEQGIKFTLGEPFKPYEQLMSVLPAASGHNL 645
Query: 547 PEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLT 606
PE R LM+DPSS I FYP +FQIDMNGK+ +WQG+ LPFIDE LL +K LT
Sbjct: 646 PEVLRILMSDPSSEILDFYPEEFQIDMNGKKMSWQGIALLPFIDENRLLEALEKRYHLLT 705
Query: 607 EEELFRNSVMLDLLYVHPQHPLYQQITLYCQLY 639
++E RN++ ++L++ Q+ Y++ Y +LY
Sbjct: 706 DDERERNTLKNEVLFISNQNKNYKR--FYNELY 736
>gi|256273435|gb|EEU08371.1| Rat1p [Saccharomyces cerevisiae JAY291]
Length = 1006
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 203/434 (46%), Positives = 284/434 (65%), Gaps = 21/434 (4%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP+F+RWL+ +YP I V+EE PQ+ +GV P+D S PNPNG E DNLYLDMNGI+
Sbjct: 1 MGVPSFFRWLSRKYPKIISPVLEEQPQI-VDGVILPLDYSAPNPNG-ELDNLYLDMNGIV 58
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ KP P + D++ ++F+Y + + + RPRK+L +A+DGVAPRAKMNQQR RRF
Sbjct: 59 HPCSHPENKPPPETEDEMLLAVFEYTNRVLNMARPRKVLVMAVDGVAPRAKMNQQRARRF 118
Query: 121 RAAKDAA-EAEAEEERLRKEFEEAGKLLS-AKEKPETCDSNVITPGTQFMAVLSAALQYF 178
R+A+DA E EA EE +R+ EE G+++ A +T DSN ITPGT FM L+AAL+Y+
Sbjct: 119 RSARDAQIENEAREEIMRQR-EEVGEIIDDAVRNKKTWDSNAITPGTPFMDKLAAALRYW 177
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
+L PGW+ +VI+SDA VPGEGEHKIM++IR QR P ++PNT HC+YGLDADLI
Sbjct: 178 TAFKLATDPGWKNLQVIISDATVPGEGEHKIMNFIRSQRADPEYNPNTTHCIYGLDADLI 237
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
L LATHE HF ILRE + +++ + + E N
Sbjct: 238 FLGLATHEPHFKILREDVFAQDNRKRNNLKDTINMTEEEKQFLQKQN------------S 285
Query: 299 KKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIRE 358
++ + +L+I VLREYL EL +P PF + ER +DD+VF+CFF GNDFLPH+P L++RE
Sbjct: 286 EQPFLWLHINVLREYLSAELWVPGLPFTFDLERAIDDWVFMCFFCGNDFLPHLPCLDVRE 345
Query: 359 GAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKR----TRIQQA 414
+I++L+ +++ + Y+T G + L VE +Q + E IF+ R R ++A
Sbjct: 346 NSIDILLDIWKVVLPKLKTYMTCDGVLNLPSVETLLQHLGSREGDIFKTRHIQEARKKEA 405
Query: 415 YEYNEAMKLNARRE 428
+E +A K ++R+
Sbjct: 406 FERRKAQKNMSKRQ 419
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 92/190 (48%), Positives = 126/190 (66%), Gaps = 1/190 (0%)
Query: 444 VKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPY 503
VKL EPGY ERYY KF ++ P++I++++KD+V Y+EG+ WV YYYQ SW WFYPY
Sbjct: 597 VKLFEPGYHERYYTAKFHVT-PQDIEQLRKDMVKCYIEGVAWVLMYYYQGCASWNWFYPY 655
Query: 504 HYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYK 563
HYAP A+D S LEI F G PF P++QLM LPAAS ALP+ +R+LM++P S I
Sbjct: 656 HYAPLATDFHGFSHLEIKFEEGTPFLPYEQLMSVLPAASGHALPKIFRSLMSEPDSEIID 715
Query: 564 FYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVH 623
FYP +F IDMNGK+ +WQG+ LPFID+ LL + L++ E RN +L +
Sbjct: 716 FYPEEFPIDMNGKKMSWQGIALLPFIDQDRLLTAVRAQYPLLSDAERARNIRGEPVLLIS 775
Query: 624 PQHPLYQQIT 633
++ Y++ +
Sbjct: 776 NKNANYERFS 785
>gi|426240937|ref|XP_004014350.1| PREDICTED: 5'-3' exoribonuclease 2 [Ovis aries]
Length = 897
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 191/361 (52%), Positives = 254/361 (70%), Gaps = 2/361 (0%)
Query: 56 MNGIIHPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQ 115
MNGIIHPC HP+ KPAP + D++ +IF+YID +F +VRPR+LLY+AIDGVAPRAKMNQQ
Sbjct: 1 MNGIIHPCTHPEDKPAPKNEDEMMVAIFEYIDRLFSIVRPRRLLYMAIDGVAPRAKMNQQ 60
Query: 116 RTRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAAL 175
R+RRFRA+K+ EA E++R+R+E G L +E E DSN ITPGT+FM L+ L
Sbjct: 61 RSRRFRASKEGMEAAIEKQRVREEILAKGGYLPPEEIKERFDSNCITPGTEFMDNLAKCL 120
Query: 176 QYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDA 235
+Y+I RLN PGW+ VILSDA+ PGEGEHKIM YIR QR P DPNT HCL G DA
Sbjct: 121 RYYIADRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADA 180
Query: 236 DLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDT 295
DLIML LATHE +F+I+RE P + + C +C Q GH +C G P + + + D+
Sbjct: 181 DLIMLGLATHEPNFTIIREEFK-PNKPKPCGLCNQFGHDVKDCEGLPREKKGKHDELADS 239
Query: 296 -PIHKKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTL 354
P + ++ FL + +LREYL+ EL + + PF + ER +DD+VF+CFFVGNDFLPH+P+L
Sbjct: 240 LPCAEGEFIFLRLSILREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSL 299
Query: 355 EIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQA 414
EIREGAI+ L+++Y+ GGYLT++G V L RV+ + +V ED IF+KR + +
Sbjct: 300 EIREGAIDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDS 359
Query: 415 Y 415
+
Sbjct: 360 F 360
Score = 206 bits (525), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 99/192 (51%), Positives = 133/192 (69%), Gaps = 3/192 (1%)
Query: 442 DTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFY 501
D V+L E G+K+RYY +KF++ +E K ++ VV YVEGLCWV RYYYQ SW+W+Y
Sbjct: 453 DNVRLWEAGWKQRYYKNKFDVDAADE--KFRRKVVQSYVEGLCWVLRYYYQGCASWKWYY 510
Query: 502 PYHYAPFASDLKDLSDLEITFFLG-EPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSP 560
P+HYAPFASD + ++D+ F G +PF+P +QLMG PAAS + LP +R LM+DP S
Sbjct: 511 PFHYAPFASDFEGIADMPSDFEKGTKPFKPLEQLMGVFPAASGNFLPPSWRKLMSDPDSS 570
Query: 561 IYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLL 620
I FYP DF ID+NGK++AWQGV LPF+DE+ L +++ LT EE RNS+ D+L
Sbjct: 571 IIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEETRRNSLGGDVL 630
Query: 621 YVHPQHPLYQQI 632
+V HPL+ I
Sbjct: 631 FVGKHHPLHDFI 642
>gi|255717294|ref|XP_002554928.1| KLTH0F17116p [Lachancea thermotolerans]
gi|238936311|emb|CAR24491.1| KLTH0F17116p [Lachancea thermotolerans CBS 6340]
Length = 982
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 205/448 (45%), Positives = 290/448 (64%), Gaps = 19/448 (4%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP+F+RWL+ +YP I V+E+ PQ++ +GVA P+D + PNPNG E DNLYLDMNGI+
Sbjct: 1 MGVPSFFRWLSRKYPKIISPVLEDTPQIE-DGVALPIDYAGPNPNG-ELDNLYLDMNGIV 58
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ +P P + D++ ++F+Y + + + RPRK+L +A+DGVAPRAKMNQQR RRF
Sbjct: 59 HPCSHPENRPPPETEDEMLLAVFEYTNRVLNMARPRKVLMIAVDGVAPRAKMNQQRARRF 118
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLL--SAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
R+A+DA E ER+ E E+ G+++ S + K +T DSN ITPGT FM L+AAL+Y+
Sbjct: 119 RSARDAQIQNEERERVLLEKEDMGEIIDDSVRNK-KTWDSNAITPGTPFMDKLAAALRYW 177
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
+L PGW+ +VI+SDA VPGEGEHKIM+++R QR P ++PNT HC+YGLDADLI
Sbjct: 178 TSFKLATDPGWKNLQVIISDATVPGEGEHKIMNFVRSQRADPQYNPNTSHCIYGLDADLI 237
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
L LATHE HF ILRE + + + V + +++ E D A P
Sbjct: 238 FLGLATHEPHFKILREDVFAQDNRRRQRVQDTI-NMSEE------DKAALLQQDSQKP-- 288
Query: 299 KKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIRE 358
+ +L+I VLREYL EL +P F + ER VDD+VF+CFF GNDFLPH+P+L++RE
Sbjct: 289 ---FLWLHISVLREYLAVELFVPRLSFEFDTERAVDDWVFMCFFCGNDFLPHLPSLDVRE 345
Query: 359 GAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYEYN 418
+I++L+ +++ + Y+T GE+ LD VE +Q + E Q+F + R QQ
Sbjct: 346 NSIDILVEIWKTILPRLKTYMTCDGELNLDSVELLLQHLGAREPQMF--KDRFQQEIRKQ 403
Query: 419 EAMKLNARRESSEELLQAPVAVADTVKL 446
EA K +S+ + + T+ L
Sbjct: 404 EAAKRRKMLKSNNNVTKGKTDRNFTIPL 431
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 120/260 (46%), Positives = 158/260 (60%), Gaps = 19/260 (7%)
Query: 439 AVADT---VKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVC 495
V DT VKL EPGY +RYY KF I + +ID+++K+VV YVEG+ WV YYYQ
Sbjct: 583 GVVDTDEEVKLFEPGYHDRYYTAKFHI-DERDIDQLRKEVVRSYVEGVSWVLLYYYQGCA 641
Query: 496 SWQWFYPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMT 555
SW W+YPYHYAPFASD KD+ DL+ITF GEPF PF+QLM LPAAS LP +R LM+
Sbjct: 642 SWNWYYPYHYAPFASDFKDIKDLKITFEKGEPFLPFEQLMSVLPAASGHNLPSIFRPLMS 701
Query: 556 DPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSV 615
+P S I FYP +F IDMNGK+ +WQG+ LPFIDEK LLR + L+ EE RN
Sbjct: 702 EPDSEIIDFYPEEFPIDMNGKKMSWQGIALLPFIDEKRLLRVVRDQYERLSPEEKARNVR 761
Query: 616 MLDLLYVHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDV--NASGGMNGYIWLCER---- 669
++L + ++ Y++ + +LY P E+ V + G++G + +
Sbjct: 762 KQEVLLISNKNVNYEKFS--SKLYGATP------VEVVVFQHFRSGLSGQAMVDQEGFAP 813
Query: 670 NGLRSIIPSPVKGLPDIERN 689
NG + I P GLPD+ N
Sbjct: 814 NG-KLICPVSGGGLPDLSTN 832
>gi|365987598|ref|XP_003670630.1| hypothetical protein NDAI_0F00680 [Naumovozyma dairenensis CBS 421]
gi|343769401|emb|CCD25387.1| hypothetical protein NDAI_0F00680 [Naumovozyma dairenensis CBS 421]
Length = 1034
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 204/443 (46%), Positives = 288/443 (65%), Gaps = 22/443 (4%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP+F+RWL+ +YP I V+EE PQ+ + V P+D S PNPNG E DNLYLDMNGI+
Sbjct: 1 MGVPSFFRWLSRKYPKIISPVLEEQPQI-VDNVKLPLDYSLPNPNG-ELDNLYLDMNGIV 58
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ KP P + D++ ++F+Y + + + RPRK+L +A+DGVAPRAKMNQQR RRF
Sbjct: 59 HPCSHPENKPPPETEDEMLLAVFEYTNRVLNMARPRKVLVMAVDGVAPRAKMNQQRARRF 118
Query: 121 RAAKDAA-EAEAEEERLRKEFEEAGKLLS-AKEKPETCDSNVITPGTQFMAVLSAALQYF 178
R+A+DA E EA EE LR++ EE G+++ A + +T DSN ITPGT FM L+AAL+Y+
Sbjct: 119 RSARDAQIENEAREEILRQK-EEIGEMIDDAVKNKKTWDSNAITPGTPFMDKLAAALRYW 177
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
+L PGW+ +VI+SDA VPGEGEHKIM++IR QR P ++PNT HC+YGLDADLI
Sbjct: 178 TAFKLATDPGWKSLQVIISDATVPGEGEHKIMNFIRSQRADPEYNPNTTHCIYGLDADLI 237
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
L LATHE HF ILRE + + + +++ E + A
Sbjct: 238 FLGLATHEPHFKILREDVFAQDNRRRGNTLADSINMSEEEKRLIQEQDA----------- 286
Query: 299 KKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIRE 358
+K + +L+I LR+YL EL IP PFP + ER +DD+VF+CFF GNDFLPH+P L++RE
Sbjct: 287 QKPFLWLHISTLRDYLSAELWIPRLPFPFDLERAIDDWVFMCFFCGNDFLPHLPCLDVRE 346
Query: 359 GAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKR----TRIQQA 414
+I++L+ +++ + Y+T GE+ L+ VE ++ + E IF+ R R Q++
Sbjct: 347 NSIDILLDIWKVVLPNLKTYMTCDGELNLESVEMLLKQLGSRESDIFKTRHIQEIRKQES 406
Query: 415 YEYNEAMKLNARRE--SSEELLQ 435
+ + + N + +E LQ
Sbjct: 407 IQRRKLQRQNGNNNFATGQEQLQ 429
Score = 204 bits (520), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 110/258 (42%), Positives = 158/258 (61%), Gaps = 6/258 (2%)
Query: 438 VAVADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSW 497
+ + V+L EPGY+ERYY K +S+ E+I+ ++K +V Y+EG+ WV YYYQ SW
Sbjct: 591 IDTDEAVRLFEPGYRERYYKAKCYVSD-EDIESLRKGMVKSYIEGVSWVLLYYYQGCASW 649
Query: 498 QWFYPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDP 557
W+YPYHYAPFA D ++D+++ F LGEPF PF+QLM LPAAS LP +R LM++P
Sbjct: 650 NWYYPYHYAPFAQDFFGITDMDVKFELGEPFLPFEQLMSVLPAASGHTLPSIFRPLMSEP 709
Query: 558 SSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVML 617
SPI FYP +F IDMNGK+ +WQG+ LPFIDEK LL+ ++ LT+ E RN
Sbjct: 710 DSPIIDFYPAEFPIDMNGKKMSWQGISLLPFIDEKRLLKTVREQYPKLTDYEKSRNVRKE 769
Query: 618 DLLYVHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVNASGGMNGYIWL-CERNGLRSII 676
+L + ++ Y++ T +LY + + A + + G++G + E L S I
Sbjct: 770 AVLLISNKNANYEKFT--KKLYKSVDGKIETAELLFHHFKSGLSGIVCTDSEGFTLGSKI 827
Query: 677 PSPVKG--LPDIERNQAM 692
PV+G LPD+ N +
Sbjct: 828 LCPVQGGSLPDLSTNSLL 845
>gi|345495292|ref|XP_001606765.2| PREDICTED: 5'-3' exoribonuclease 1-like [Nasonia vitripennis]
Length = 1200
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 236/652 (36%), Positives = 347/652 (53%), Gaps = 99/652 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEED--PQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNG 58
MGVP F+R++++RYP I +++E PQ +DNLYLDMN
Sbjct: 1 MGVPKFFRFISERYP-CINKIIKEHEIPQ---------------------YDNLYLDMNS 38
Query: 59 IIHPCFHPD--------GKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRA 110
IIH C HP GK S +D+F+++ Y++ IF +V+P ++L+LA DGVAPRA
Sbjct: 39 IIHTCSHPTDSDVHFRIGK-KEFSDEDIFENVSRYVEIIFRIVKPLEMLFLAFDGVAPRA 97
Query: 111 KMNQQRTRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAV 170
KMNQQR RFR A+D + E E K F D+N ITPGT FMA
Sbjct: 98 KMNQQRANRFRVARDNSILEREILLTDKLF----------------DANSITPGTVFMAD 141
Query: 171 LSAALQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCL 230
L +++FI +++ P WQ K+ILS + PGEGEHKIM +IR + ++ NTRHCL
Sbjct: 142 LIDHMKHFIAYKVSTDPLWQKCKIILSGSEAPGEGEHKIMQFIRYHKAQQNYNSNTRHCL 201
Query: 231 YGLDADLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWN 290
Y LDADLI+L L THE HFS+LRE T G+ +K
Sbjct: 202 YSLDADLIVLGLCTHEPHFSLLREKNTF-GKAKKML------------------------ 236
Query: 291 GVDDTPIHKKKYQFLNIWVLREYLQYELD--IPNPPFPINFERIVDDFVFLCFFVGNDFL 348
TP + + L++ + REYL YE F + E+I+DD+V + F VGNDF+
Sbjct: 237 ----TP-EESDFHLLHLSLFREYLGYEFAPIKSKLKFEFDLEKIIDDWVLIGFLVGNDFI 291
Query: 349 PHMPTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIF--- 405
P +P L I GA+ LL VY + GY+ +AGE+ L R EK+I+S++ E +IF
Sbjct: 292 PQLPHLNIVNGALPLLYSVYIEVLPTLDGYINEAGELNLSRFEKYIKSLSHVEHKIFAST 351
Query: 406 --QKRTRIQQAYEYN------EAMKLNARRESSEELLQAPVAVADTVKLGEPGYKER-YY 456
K +++A + + E + + ++++ +++L Q T + + R YY
Sbjct: 352 VSSKICNVKEAKKVDPITGHFEQLSIESKKDDAKDLDQE----MKTKEYSNFEVQRRDYY 407
Query: 457 ADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLS 516
K + E + +V +Y+ + W YYY CSW W++PYHYAPF D+K L
Sbjct: 408 LHKLNFEDLSE--SLILPLVHEYIRAIQWTLNYYYHGCCSWSWYFPYHYAPFIRDVKGLE 465
Query: 517 DLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGK 576
++ + F + +PF P L+ LP A+S LP+ R L+T+ +SPI FYP +F+ID+N K
Sbjct: 466 NINLKFDMAKPFLPLQHLLAVLPPANSHLLPKPLRFLLTNSNSPIIHFYPNEFEIDLNDK 525
Query: 577 RFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVHPQHPL 628
W+ +V +PFI+EK L+ L +E RN+ L +Y + + L
Sbjct: 526 SNDWEAIVLIPFINEKELISAMDSYITTLNPKERHRNTNGLTCVYTYTKTDL 577
>gi|349581214|dbj|GAA26372.1| K7_Rat1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 1006
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 202/428 (47%), Positives = 280/428 (65%), Gaps = 21/428 (4%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP+F+RWL+ +YP I V+EE PQ+ +GV P+D S PNPNG E DNLYLDMNGI+
Sbjct: 1 MGVPSFFRWLSRKYPKIISPVLEEQPQI-VDGVILPLDYSAPNPNG-ELDNLYLDMNGIV 58
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ KP P + D++ ++F+Y + + + RPRK+L +A+DGVAPRAKMNQQR RRF
Sbjct: 59 HPCSHPENKPPPETEDEMLLAVFEYTNRVLNMARPRKVLVMAVDGVAPRAKMNQQRARRF 118
Query: 121 RAAKDAA-EAEAEEERLRKEFEEAGKLLS-AKEKPETCDSNVITPGTQFMAVLSAALQYF 178
R+A+DA E EA EE +R+ EE G+++ A +T DSN ITPGT FM L+AAL+Y+
Sbjct: 119 RSARDAQIENEAREEIMRQR-EEVGEIIDDAVRNKKTWDSNAITPGTPFMDKLAAALRYW 177
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
+L PGW+ +VI+SDA VPGEGEHKIM++IR QR P ++PNT HC+YGLDADLI
Sbjct: 178 TAFKLATDPGWKNLQVIISDATVPGEGEHKIMNFIRSQRADPEYNPNTTHCIYGLDADLI 237
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
L LATHE HF ILRE + +++ + + E I
Sbjct: 238 FLGLATHEPHFKILREDVFAQDNRKRNNLKDTINMTEEEKQ------------FLQKQIS 285
Query: 299 KKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIRE 358
++ + +L+I VLREYL EL +P PF + ER +DD+VF+CFF GNDFLPH+P L++RE
Sbjct: 286 EQPFLWLHINVLREYLSAELWVPGLPFTFDLERAIDDWVFMCFFCGNDFLPHLPCLDVRE 345
Query: 359 GAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKR----TRIQQA 414
+I++L+ +++ + Y+T G + L VE +Q + E IF+ R R ++A
Sbjct: 346 NSIDILLDIWKVVLPKLKTYMTCDGVLNLPSVETLLQHLGSREGDIFKTRHIQEARKKEA 405
Query: 415 YEYNEAMK 422
+E +A K
Sbjct: 406 FERRKAQK 413
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 92/190 (48%), Positives = 126/190 (66%), Gaps = 1/190 (0%)
Query: 444 VKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPY 503
VKL EPGY ERYY KF ++ P++I++++KD+V Y+EG+ WV YYYQ SW WFYPY
Sbjct: 597 VKLFEPGYHERYYTAKFHVT-PQDIEQLRKDMVKCYIEGVAWVLMYYYQGCASWNWFYPY 655
Query: 504 HYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYK 563
HYAP A+D S LEI F G PF P++QLM LPAAS ALP+ +R+LM++P S I
Sbjct: 656 HYAPLATDFHGFSHLEIKFEEGTPFLPYEQLMSVLPAASGHALPKIFRSLMSEPDSEIID 715
Query: 564 FYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVH 623
FYP +F IDMNGK+ +WQG+ LPFID+ LL + L++ E RN +L +
Sbjct: 716 FYPEEFPIDMNGKKMSWQGIALLPFIDQDRLLTAVRAQYPLLSDAERARNIRGEPVLLIS 775
Query: 624 PQHPLYQQIT 633
++ Y++ +
Sbjct: 776 NKNANYERFS 785
>gi|401623665|gb|EJS41757.1| rat1p [Saccharomyces arboricola H-6]
Length = 1006
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 203/448 (45%), Positives = 288/448 (64%), Gaps = 18/448 (4%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP+F+RWL+ +YP I V+EE PQV +GV P+D S PNPNG E DNLYLDMNGI+
Sbjct: 1 MGVPSFFRWLSRKYPKIISPVLEEQPQV-VDGVILPLDYSAPNPNG-ELDNLYLDMNGIV 58
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ KP P + D++ ++F+Y + + + RPRK+L +A+DGVAPRAKMNQQR RRF
Sbjct: 59 HPCSHPENKPPPETEDEMLLAVFEYTNRVLNMARPRKVLVMAVDGVAPRAKMNQQRARRF 118
Query: 121 RAAKDA-AEAEAEEERLRKEFEEAGKLLS-AKEKPETCDSNVITPGTQFMAVLSAALQYF 178
R+A+DA E EA EE +R+ EE G+++ A +T DSN ITPGT FM L+AAL+Y+
Sbjct: 119 RSARDAQVENEAREEVMRQR-EEVGEIIDDAVRNKKTWDSNAITPGTPFMDKLAAALRYW 177
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
+L PGW+ +VI+SDA VPGEGEHKIM++IR QR P ++PNT HC+YGLDADLI
Sbjct: 178 TAFKLATDPGWKNLQVIISDATVPGEGEHKIMNFIRSQRADPEYNPNTTHCIYGLDADLI 237
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
L LATHE HF ILRE + +++ + + E N
Sbjct: 238 FLGLATHEPHFKILREDVFAQDNRKRNNIKDTMNMTEEEKQFLQKQNS------------ 285
Query: 299 KKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIRE 358
++ + +L+I VLREYL EL +P PF + ER +DD+VF+CFF GNDFLPH+P L++RE
Sbjct: 286 EQPFLWLHINVLREYLSAELWVPGLPFTFDLERAIDDWVFMCFFCGNDFLPHLPCLDVRE 345
Query: 359 GAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYEYN 418
+I++L+ +++ + Y+T G + L VE +Q + E IF+ R IQ+A +
Sbjct: 346 NSIDILLDIWKVVLPRLKTYMTCDGVLNLPSVETLLQHLGSREGDIFKTR-HIQEARKKE 404
Query: 419 EAMKLNARRESSEELLQAPVAVADTVKL 446
+ ++ S+ + P+ + +++
Sbjct: 405 AFERRKGQKNMSKGQDRHPIVATEQLQM 432
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 92/170 (54%), Positives = 114/170 (67%), Gaps = 1/170 (0%)
Query: 444 VKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPY 503
VKL EPGY ERYY KF ++ P +ID+++KD+V Y+EG+ WV YYYQ SW WFYPY
Sbjct: 594 VKLFEPGYHERYYTAKFRVA-PHDIDQLRKDMVKCYIEGVAWVLTYYYQGCASWNWFYPY 652
Query: 504 HYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYK 563
HYAP A+D S LEI F G PF PF+QLM LPAAS ALP+ +R LM++ S I
Sbjct: 653 HYAPLATDFHGFSHLEIKFEEGTPFLPFEQLMSVLPAASGHALPKIFRTLMSESDSEIID 712
Query: 564 FYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRN 613
FYP +F IDMNGK+ +WQG+ LPFID+ LL + L+E E RN
Sbjct: 713 FYPEEFPIDMNGKKMSWQGIALLPFIDQDRLLTVVRAQYPLLSEAERARN 762
>gi|392296379|gb|EIW07481.1| Rat1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 1006
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 202/428 (47%), Positives = 280/428 (65%), Gaps = 21/428 (4%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP+F+RWL+ +YP I V+EE PQ+ +GV P+D S PNPNG E DNLYLDMNGI+
Sbjct: 1 MGVPSFFRWLSRKYPKIISPVLEEQPQI-VDGVILPLDYSAPNPNG-ELDNLYLDMNGIV 58
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ KP P + D++ ++F+Y + + + RPRK+L +A+DGVAPRAKMNQQR RRF
Sbjct: 59 HPCSHPENKPPPETEDEMLLAVFEYTNRVLNMARPRKVLVMAVDGVAPRAKMNQQRARRF 118
Query: 121 RAAKDAA-EAEAEEERLRKEFEEAGKLLS-AKEKPETCDSNVITPGTQFMAVLSAALQYF 178
R+A+DA E EA EE +R+ EE G+++ A +T DSN ITPGT FM L+AAL+Y+
Sbjct: 119 RSARDAQIENEAREEIMRQR-EEVGEIIDDAVRNKKTWDSNAITPGTPFMDKLAAALRYW 177
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
+L PGW+ +VI+SDA VPGEGEHKIM++IR QR P ++PNT HC+YGLDADLI
Sbjct: 178 TAFKLATDPGWKNLQVIISDATVPGEGEHKIMNFIRSQRADPEYNPNTTHCIYGLDADLI 237
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
L LATHE HF ILRE + +++ + + E N
Sbjct: 238 FLGLATHEPHFKILREDVFAQDNRKRNNLKDTINMTEEEKQFLQKQN------------S 285
Query: 299 KKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIRE 358
++ + +L+I VLREYL EL +P PF + ER +DD+VF+CFF GNDFLPH+P L++RE
Sbjct: 286 EQPFLWLHINVLREYLSAELWVPGLPFTFDLERAIDDWVFMCFFCGNDFLPHLPCLDVRE 345
Query: 359 GAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKR----TRIQQA 414
+I++L+ +++ + Y+T G + L VE +Q + E IF+ R R ++A
Sbjct: 346 NSIDILLDIWKVVLPKLKTYMTCDGVLNLPSVETLLQHLGSREGDIFKTRHIQEARKKEA 405
Query: 415 YEYNEAMK 422
+E +A K
Sbjct: 406 FERRKAQK 413
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 92/190 (48%), Positives = 126/190 (66%), Gaps = 1/190 (0%)
Query: 444 VKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPY 503
VKL EPGY ERYY KF ++ P++I++++KD+V Y+EG+ WV YYYQ SW WFYPY
Sbjct: 597 VKLFEPGYHERYYTAKFHVT-PQDIEQLRKDMVKCYIEGVAWVLMYYYQGCASWNWFYPY 655
Query: 504 HYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYK 563
HYAP A+D S LEI F G PF P++QLM LPAAS ALP+ +R+LM++P S I
Sbjct: 656 HYAPLATDFHGFSHLEIKFEEGTPFLPYEQLMSVLPAASGHALPKIFRSLMSEPDSEIID 715
Query: 564 FYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVH 623
FYP +F IDMNGK+ +WQG+ LPFID+ LL + L++ E RN +L +
Sbjct: 716 FYPEEFPIDMNGKKMSWQGIALLPFIDQDRLLTAVRAQYPLLSDAERARNIRGEPVLLIS 775
Query: 624 PQHPLYQQIT 633
++ Y++ +
Sbjct: 776 NKNANYERFS 785
>gi|151945677|gb|EDN63918.1| 5'-3'-exoribonuclease [Saccharomyces cerevisiae YJM789]
gi|190407386|gb|EDV10653.1| 5'-3' exoribonuclease [Saccharomyces cerevisiae RM11-1a]
gi|259149530|emb|CAY86334.1| Rat1p [Saccharomyces cerevisiae EC1118]
gi|323346498|gb|EGA80785.1| Rat1p [Saccharomyces cerevisiae Lalvin QA23]
gi|365763283|gb|EHN04813.1| Rat1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 1006
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 202/428 (47%), Positives = 280/428 (65%), Gaps = 21/428 (4%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP+F+RWL+ +YP I V+EE PQ+ +GV P+D S PNPNG E DNLYLDMNGI+
Sbjct: 1 MGVPSFFRWLSRKYPKIISPVLEEQPQI-VDGVILPLDYSAPNPNG-ELDNLYLDMNGIV 58
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ KP P + D++ ++F+Y + + + RPRK+L +A+DGVAPRAKMNQQR RRF
Sbjct: 59 HPCSHPENKPPPETEDEMLLAVFEYTNRVLNMARPRKVLVMAVDGVAPRAKMNQQRARRF 118
Query: 121 RAAKDAA-EAEAEEERLRKEFEEAGKLLS-AKEKPETCDSNVITPGTQFMAVLSAALQYF 178
R+A+DA E EA EE +R+ EE G+++ A +T DSN ITPGT FM L+AAL+Y+
Sbjct: 119 RSARDAQIENEAREEIMRQR-EEVGEIIDDAVRNKKTWDSNAITPGTPFMDKLAAALRYW 177
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
+L PGW+ +VI+SDA VPGEGEHKIM++IR QR P ++PNT HC+YGLDADLI
Sbjct: 178 TAFKLATDPGWKNLQVIISDATVPGEGEHKIMNFIRSQRADPEYNPNTTHCIYGLDADLI 237
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
L LATHE HF ILRE + +++ + + E N
Sbjct: 238 FLGLATHEPHFKILREDVFAQDNRKRNNLKDTINMTEEEKQFLQKQN------------S 285
Query: 299 KKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIRE 358
++ + +L+I VLREYL EL +P PF + ER +DD+VF+CFF GNDFLPH+P L++RE
Sbjct: 286 EQPFLWLHINVLREYLSAELWVPGLPFTFDLERAIDDWVFMCFFCGNDFLPHLPCLDVRE 345
Query: 359 GAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKR----TRIQQA 414
+I++L+ +++ + Y+T G + L VE +Q + E IF+ R R ++A
Sbjct: 346 NSIDILLDIWKVVLPKLKTYMTCDGVLNLPSVETLLQHLGSREGDIFKTRHIQEARKKEA 405
Query: 415 YEYNEAMK 422
+E +A K
Sbjct: 406 FERRKAQK 413
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 92/190 (48%), Positives = 126/190 (66%), Gaps = 1/190 (0%)
Query: 444 VKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPY 503
VKL EPGY ERYY KF ++ P++I++++KD+V Y+EG+ WV YYYQ SW WFYPY
Sbjct: 597 VKLFEPGYHERYYTAKFHVT-PQDIEQLRKDMVKCYIEGVAWVLMYYYQGCASWNWFYPY 655
Query: 504 HYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYK 563
HYAP A+D S LEI F G PF P++QLM LPAAS ALP+ +R+LM++P S I
Sbjct: 656 HYAPLATDFHGFSHLEIKFEEGTPFLPYEQLMSVLPAASGHALPKIFRSLMSEPDSEIID 715
Query: 564 FYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVH 623
FYP +F IDMNGK+ +WQG+ LPFID+ LL + L++ E RN +L +
Sbjct: 716 FYPEEFPIDMNGKKMSWQGIALLPFIDQDRLLTAVRAQYPLLSDAERARNIRGEPVLLIS 775
Query: 624 PQHPLYQQIT 633
++ Y++ +
Sbjct: 776 NKNANYERFS 785
>gi|449019490|dbj|BAM82892.1| 5'->3' exoribonuclease [Cyanidioschyzon merolae strain 10D]
Length = 1363
Score = 387 bits (994), Expect = e-104, Method: Compositional matrix adjust.
Identities = 210/428 (49%), Positives = 276/428 (64%), Gaps = 20/428 (4%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARP----------VDVSKPNPNGMEFD 50
MG+ +F+RW+ RYP ++ VEE P D + VDVS PNPNG EF
Sbjct: 1 MGIASFFRWVVARYPRALQAAVEEAPVTDQAALENGNYLDDNDYLHVDVSLPNPNGEEFS 60
Query: 51 NLYLDMNGIIHPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRA 110
NLY D+NG++H C HP+ +P P + +D+F+ +F Y+D I LVRPR+L+Y+AIDGVAPRA
Sbjct: 61 NLYFDLNGVVHMCTHPEDRPPPATEEDMFQDVFRYMDRIVALVRPRRLIYIAIDGVAPRA 120
Query: 111 KMNQQRTRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAV 170
K+NQQRTRRFRAAK+A E EEE+LR + E G + K K + DSNVITPGT FM
Sbjct: 121 KINQQRTRRFRAAKEAREKTEEEEKLRALWREQGLRVPPKPK-KPFDSNVITPGTLFMER 179
Query: 171 LSAALQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCL 230
L+ AL+ +I+ R+ P W+ VILSDA+VPGEGEHKI +IR QR PG+DP TRH L
Sbjct: 180 LAVALRRYIRERIRSCPAWRSLVVILSDASVPGEGEHKIAEFIRTQRAQPGYDPETRHVL 239
Query: 231 YGLDADLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWN 290
YGLDADLIML+LATHE HF ILRE I + +K + + G D+ +
Sbjct: 240 YGLDADLIMLALATHEPHFFILRERIYFDSRADKAIQAVKAMNAQQTPAGDRIDHKTGTS 299
Query: 291 GVDDTPIHKKKYQFLNIWVLREYLQYEL-------DIPNPPFPINFERIVDDFVFLCFFV 343
P+ ++ + F I LREYLQ E + P P++ E +DDFVFLCFFV
Sbjct: 300 AGPGLPLPERPFDFFRIDRLREYLQAEFRDALQHDAVRQPREPLDVEIALDDFVFLCFFV 359
Query: 344 GNDFLPHMPTLEIREGAINLLMHVYRREFTAMGGYLTDA-GEVLLDRVEKFIQSVAVYED 402
GNDFLPH+P+LEIREGAI+ L+ VY+ +F + G+LTD G + DRV + ++ VA ED
Sbjct: 360 GNDFLPHLPSLEIREGAIDFLLEVYKYKFQRI-GHLTDGHGGIHFDRVRELLRDVAHVED 418
Query: 403 QIFQKRTR 410
+F++R R
Sbjct: 419 SVFRERAR 426
Score = 155 bits (392), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 83/174 (47%), Positives = 101/174 (58%), Gaps = 6/174 (3%)
Query: 427 RESSEELLQAPVAVADTVKLGEPGYKERYYADKFEISNP---EEIDKVKKDVVLKYVEGL 483
RE ++ P D V+ PG++ERYY KF P E + + + Y EGL
Sbjct: 789 RERLKQRQTRPPTEEDPVRFHLPGWRERYYQSKFPHWPPLDTEAGAQALQRLCRAYYEGL 848
Query: 484 CWVCRYYYQDVCSWQWFYPYHYAPFASDLKD--LSDLEITFFLGEPFRPFDQLMGTLPAA 541
WV RYYY SW WFYPYHYAP ASDL + +I F G PF P +QLM LPA+
Sbjct: 849 LWVYRYYYAGCPSWGWFYPYHYAPLASDLAQCCVDQKDIVFERGAPFTPLEQLMAVLPAS 908
Query: 542 SSS-ALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLL 594
S + LP LM +P SPI ++YP DF ID NGKRFAWQGV LPF+DE+ L
Sbjct: 909 SGAQCLPRILYELMINPHSPIIEYYPTDFAIDYNGKRFAWQGVALLPFVDEQRL 962
>gi|444315189|ref|XP_004178252.1| hypothetical protein TBLA_0A09480 [Tetrapisispora blattae CBS 6284]
gi|387511291|emb|CCH58733.1| hypothetical protein TBLA_0A09480 [Tetrapisispora blattae CBS 6284]
Length = 1063
Score = 387 bits (994), Expect = e-104, Method: Compositional matrix adjust.
Identities = 198/428 (46%), Positives = 276/428 (64%), Gaps = 16/428 (3%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP+F+RWL+ +YP I V E PQV +GV P+D S PNPNG E DNLYLDMNGI+
Sbjct: 1 MGVPSFFRWLSRKYPKIISPVSEILPQV-VDGVTLPIDYSAPNPNG-ELDNLYLDMNGIV 58
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ KPAP + D++ ++F+Y + + + RPRK+L +A+DGVAPRAKMNQQR RRF
Sbjct: 59 HPCSHPENKPAPETEDEMLLAVFEYTNRVLNMARPRKVLMIAVDGVAPRAKMNQQRARRF 118
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPE-TCDSNVITPGTQFMAVLSAALQYFI 179
R+A+DA+ E + E E+ G+++ K + T DSN ITPGT FM L+AAL+Y+I
Sbjct: 119 RSARDASIENQAREAILNEREKIGEIIDESLKSKKTWDSNAITPGTPFMDKLAAALRYWI 178
Query: 180 QARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIM 239
+L GW+ +VI+SDA VPGEGEHKIM+++R QR P ++PNT HC+YGLDADLI
Sbjct: 179 SFKLATDLGWKNLQVIISDATVPGEGEHKIMNFVRAQRGDPEYNPNTTHCIYGLDADLIF 238
Query: 240 LSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIHK 299
L LATHE HF ILRE + ++K + + E + +
Sbjct: 239 LGLATHEPHFKILREDVFAQDNRKKHKLKDTMNMTEEEKQ------------LISKQDSE 286
Query: 300 KKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREG 359
K + +L++ VLREYL EL +P PFP + ER +DD+VF+CFF GNDFLPH+P+L++RE
Sbjct: 287 KPFLWLHLSVLREYLSAELFVPRLPFPFDLERAIDDWVFMCFFCGNDFLPHLPSLDVREN 346
Query: 360 AINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYEYNE 419
+I++L+ +++ + Y+T G + L VE +Q V E IF+ + IQQ +
Sbjct: 347 SIDILLDIWKTLLPQLKTYMTCDGRLDLKAVELLLQQVGSRESDIFRTK-HIQQVRKKES 405
Query: 420 AMKLNARR 427
+ N R+
Sbjct: 406 LQRKNIRK 413
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 92/178 (51%), Positives = 114/178 (64%), Gaps = 4/178 (2%)
Query: 439 AVADT---VKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVC 495
V DT KL EPGYKERYY +KF I + +EI+ ++KD+V Y+EG+ WV YYYQ
Sbjct: 611 GVIDTDKPTKLYEPGYKERYYVNKFHIKS-DEIEALRKDMVKSYIEGVAWVLLYYYQGCA 669
Query: 496 SWQWFYPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMT 555
SW+WFYPYHYAP SD S++ + F EPF PF+QLM LPAAS LP +R LM+
Sbjct: 670 SWEWFYPYHYAPLPSDFYGFSNMNVEFGESEPFLPFEQLMSVLPAASGHTLPAIFRPLMS 729
Query: 556 DPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRN 613
P S I FYP +F IDMNGK+ AW G+ LPFID LL+ + LT+ E RN
Sbjct: 730 SPDSEIIDFYPEEFPIDMNGKKMAWHGIALLPFIDATRLLKVVRDQYPKLTDAERSRN 787
>gi|66826105|ref|XP_646407.1| 5'-3' exoribonuclease [Dictyostelium discoideum AX4]
gi|60474374|gb|EAL72311.1| 5'-3' exoribonuclease [Dictyostelium discoideum AX4]
Length = 1190
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 197/418 (47%), Positives = 273/418 (65%), Gaps = 22/418 (5%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MG+PAF+RWL D+Y I + E G V VD + PNPNG E+DNLYLDMNGII
Sbjct: 1 MGIPAFFRWLIDKYGGLIQETTEPREADGGRSV---VDFTTPNPNG-EYDNLYLDMNGII 56
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ P P S +D+ +SI++Y+D +F ++RPRKL+Y+A+DGVAPRAKMNQQRTRRF
Sbjct: 57 HPCAHPEKGPKPKSIEDMIQSIYEYLDLLFAIIRPRKLIYMAVDGVAPRAKMNQQRTRRF 116
Query: 121 RAAKDAAEAEAEEERLRKEF--------EEAGKLLSAKEKPETCDSNVITPGTQFMAVLS 172
RAA D+ + +E L +E +E + + K+ DSN ITPGT FM ++
Sbjct: 117 RAALDSRLDKDKEAALWRERIYDGLATQQEYEQYMEEKKNKFKFDSNCITPGTLFMDRVA 176
Query: 173 AALQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYG 232
+L+ ++ +L P W+ K+I+SDA+VPGEGEHKIM Y+R QR P +DPN +H +YG
Sbjct: 177 ESLRTYVAEKLTTDPAWKDVKIIISDASVPGEGEHKIMDYVRHQRAQPDYDPNLKHIIYG 236
Query: 233 LDADLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGV 292
LDADLIML LATHE++F ILRE I P + C C + GHLA EC + D+ D+
Sbjct: 237 LDADLIMLGLATHEVNFDILREFIQ-PIARGVCHKCHKKGHLAIECKEEVDDSVKDF--- 292
Query: 293 DDTPIHKKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMP 352
K YQ L++ +L+EYL+ E + + PF + +RIVDDF+FLCFFVGNDFLPH+P
Sbjct: 293 -----LVKNYQILHLHLLKEYLELETKV-STPFGFDIDRIVDDFIFLCFFVGNDFLPHLP 346
Query: 353 TLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTR 410
LEI++GAI+ ++ Y+ + YL GEV R+ + ++ E++ FQ++ +
Sbjct: 347 NLEIKDGAIDRVIKCYKELLPSFDDYLVSNGEVNFPRLSQIFVALTKGEEESFQRKIQ 404
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 78/190 (41%), Positives = 114/190 (60%), Gaps = 13/190 (6%)
Query: 443 TVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYP 502
+K E G+++RYY F++ N ++I K + YVEGL WV +YY++ SW W+YP
Sbjct: 606 NIKYSEEGWRDRYYQSCFQVENEDDI----KQICKSYVEGLVWVLKYYFKGCSSWGWYYP 661
Query: 503 YHYAPFASDLKDLSD-LEI-TFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLM-----T 555
YHY+P+ +D+ D E + +GEPF+PF+QLM LP AS +P+ Y+ LM
Sbjct: 662 YHYSPYITDISKFFDQFEYPQYEMGEPFKPFNQLMSVLPPASCQFVPKPYQKLMGISVDG 721
Query: 556 DP--SSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRN 613
+P SPI +FYP F+ID ++GV LPFI+ LL+ K E LTEEE+ RN
Sbjct: 722 EPVEESPIIEFYPRAFRIDRGPTEPLYKGVCLLPFINSIKLLKTISKTEPLLTEEEVDRN 781
Query: 614 SVMLDLLYVH 623
++ DL++ H
Sbjct: 782 TLGHDLMFCH 791
>gi|452818702|gb|EME25927.1| 5'-3' exoribonuclease [Galdieria sulphuraria]
Length = 645
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 207/445 (46%), Positives = 278/445 (62%), Gaps = 25/445 (5%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVE-EDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGI 59
MGVPAF+RWL+ +YP + DV+E P +G +D ++PNPNG EFDNLYLDMNGI
Sbjct: 1 MGVPAFFRWLSLKYPKVLCDVIELVGPYDQQQGDFVSIDPTEPNPNGREFDNLYLDMNGI 60
Query: 60 IHPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRR 119
IHPC HP+ +P PT+ +++F+ IF YID + ++RPRKL+YLA+DGVAPRAK+NQQR+RR
Sbjct: 61 IHPCTHPENRPPPTTEEEMFEEIFRYIDRLVYMIRPRKLVYLAVDGVAPRAKINQQRSRR 120
Query: 120 FRAAKDAAEAEAEEERLRKEFEEAGKLL---SAKEKPETCDSNVITPGTQFMAVLSAALQ 176
FRAAK+A E + E R+R E+++ G + KP DSNVITPGT FM LS AL+
Sbjct: 121 FRAAKEAEEKQKELLRVRDEWKKKGLRVPEYDPNRKP--FDSNVITPGTPFMTNLSVALK 178
Query: 177 YFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDAD 236
FI R+ P + VI SD++VPGEGEHKI +IR QR G+DPNT H LYGLDAD
Sbjct: 179 QFIADRVAHDPAYNKISVIYSDSSVPGEGEHKIAEFIRTQRAQEGYDPNTSHVLYGLDAD 238
Query: 237 LIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTP 296
LIML+LATHE++F +LRE + QQ + Q + N A
Sbjct: 239 LIMLALATHELNFYVLRERVFPSPQQSEQKRQPQEAQDSKIQDSSDIQNAAAIGA----- 293
Query: 297 IHKKKYQFLNIWVLREYLQYELDIP------------NPPFPINFERIVDDFVFLCFFVG 344
+ +Q L+I +LRE L+ E P + + ER++DDFVFLCFFVG
Sbjct: 294 --RNSFQLLSIDILRECLEAEFMEPLEIGFEMESSSRHQRLEFDLERVIDDFVFLCFFVG 351
Query: 345 NDFLPHMPTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQI 404
NDFLPH+P+L+IREGAI+ L+ +Y++ G D GE+ RV F+ +A ED I
Sbjct: 352 NDFLPHLPSLDIREGAIDYLIELYKKLVPRFGYLSDDKGEIHFGRVRLFLNELATTEDYI 411
Query: 405 FQKRTRIQQAYEYNEAMKLNARRES 429
FQKR ++ + +A + ++S
Sbjct: 412 FQKRKLEEEKKQKQQAERATENKQS 436
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/98 (47%), Positives = 62/98 (63%), Gaps = 3/98 (3%)
Query: 418 NEAMKLNARRESSEELLQAPV--AVADTVKLGEPGYKERYYADKFEISNPEEIDKVKKD- 474
++ +K +E E L + V +V D V+LGE G+KERYY KF S E + K++
Sbjct: 539 DQQVKEQFEKELKERLYKKRVVDSVEDVVRLGEQGWKERYYEKKFHWSPQSETSQRKREE 598
Query: 475 VVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDL 512
+ KY EGL WV RYYY+ SW W++PYHYAPFASDL
Sbjct: 599 LAYKYFEGLLWVMRYYYRGCVSWTWYFPYHYAPFASDL 636
>gi|6324622|ref|NP_014691.1| Rat1p [Saccharomyces cerevisiae S288c]
gi|417592|sp|Q02792.3|XRN2_YEAST RecName: Full=5'-3' exoribonuclease 2; AltName: Full=Ribonucleic
acid-trafficking protein 1; AltName: Full=p116
gi|172365|gb|AAA34960.1| Rat1p [Saccharomyces cerevisiae]
gi|386005|gb|AAB26818.1| transcription activator [Saccharomyces cerevisiae]
gi|1420179|emb|CAA99240.1| RAT1 [Saccharomyces cerevisiae]
gi|285814937|tpg|DAA10830.1| TPA: Rat1p [Saccharomyces cerevisiae S288c]
Length = 1006
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 201/428 (46%), Positives = 279/428 (65%), Gaps = 21/428 (4%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP+F+RWL+ +YP I V+EE PQ+ +GV P+D S NPNG E DNLYLDMNGI+
Sbjct: 1 MGVPSFFRWLSRKYPKIISPVLEEQPQI-VDGVILPLDYSASNPNG-ELDNLYLDMNGIV 58
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ KP P + D++ ++F+Y + + + RPRK+L +A+DGVAPRAKMNQQR RRF
Sbjct: 59 HPCSHPENKPPPETEDEMLLAVFEYTNRVLNMARPRKVLVMAVDGVAPRAKMNQQRARRF 118
Query: 121 RAAKDAA-EAEAEEERLRKEFEEAGKLLS-AKEKPETCDSNVITPGTQFMAVLSAALQYF 178
R+A+DA E EA EE +R+ EE G+++ A +T DSN ITPGT FM L+AAL+Y+
Sbjct: 119 RSARDAQIENEAREEIMRQR-EEVGEIIDDAVRNKKTWDSNAITPGTPFMDKLAAALRYW 177
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
+L PGW+ +VI+SDA VPGEGEHKIM++IR QR P ++PNT HC+YGLDADLI
Sbjct: 178 TAFKLATDPGWKNLQVIISDATVPGEGEHKIMNFIRSQRADPEYNPNTTHCIYGLDADLI 237
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
L LATHE HF ILRE + +++ + + E N
Sbjct: 238 FLGLATHEPHFKILREDVFAQDNRKRNNLKDTINMTEEEKQFLQKQN------------S 285
Query: 299 KKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIRE 358
++ + +L+I VLREYL EL +P PF + ER +DD+VF+CFF GNDFLPH+P L++RE
Sbjct: 286 EQPFLWLHINVLREYLSAELWVPGLPFTFDLERAIDDWVFMCFFCGNDFLPHLPCLDVRE 345
Query: 359 GAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKR----TRIQQA 414
+I++L+ +++ + Y+T G + L VE +Q + E IF+ R R ++A
Sbjct: 346 NSIDILLDIWKVVLPKLKTYMTCDGVLNLPSVETLLQHLGSREGDIFKTRHIQEARKKEA 405
Query: 415 YEYNEAMK 422
+E +A K
Sbjct: 406 FERRKAQK 413
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 92/190 (48%), Positives = 126/190 (66%), Gaps = 1/190 (0%)
Query: 444 VKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPY 503
VKL EPGY ERYY KF ++ P++I++++KD+V Y+EG+ WV YYYQ SW WFYPY
Sbjct: 597 VKLFEPGYHERYYTAKFHVT-PQDIEQLRKDMVKCYIEGVAWVLMYYYQGCASWNWFYPY 655
Query: 504 HYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYK 563
HYAP A+D S LEI F G PF P++QLM LPAAS ALP+ +R+LM++P S I
Sbjct: 656 HYAPLATDFHGFSHLEIKFEEGTPFLPYEQLMSVLPAASGHALPKIFRSLMSEPDSEIID 715
Query: 564 FYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVH 623
FYP +F IDMNGK+ +WQG+ LPFID+ LL + L++ E RN +L +
Sbjct: 716 FYPEEFPIDMNGKKMSWQGIALLPFIDQDRLLTAVRAQYPLLSDAERARNIRGEPVLLIS 775
Query: 624 PQHPLYQQIT 633
++ Y++ +
Sbjct: 776 NKNANYERFS 785
>gi|50293593|ref|XP_449208.1| hypothetical protein [Candida glabrata CBS 138]
gi|74608566|sp|Q6FKN6.3|XRN2_CANGA RecName: Full=5'-3' exoribonuclease 2
gi|49528521|emb|CAG62182.1| unnamed protein product [Candida glabrata]
Length = 1018
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 209/451 (46%), Positives = 294/451 (65%), Gaps = 22/451 (4%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP+F+RWL+ +YP I V+EE PQ +GVA P+D + PNPNG E DNLYLDMNGI+
Sbjct: 1 MGVPSFFRWLSRKYPKIISPVLEE-PQQLVDGVALPIDYAGPNPNG-ELDNLYLDMNGIV 58
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ KP P + DD+ ++F+Y + + + RPRK+L +A+DGVAPRAKMNQQR+RRF
Sbjct: 59 HPCSHPENKPPPETEDDMLLAVFEYTNRVLNMARPRKVLVIAVDGVAPRAKMNQQRSRRF 118
Query: 121 RAAKDAA-EAEAEEERLRKEFEEAGKLL--SAKEKPETCDSNVITPGTQFMAVLSAALQY 177
R+A+DA E EA EE +R++ E+ G+++ S K K +T DSN ITPGT FM L+ AL+Y
Sbjct: 119 RSARDAEIENEAREEIMRQK-EQLGQIIDDSVKNK-KTWDSNAITPGTPFMDKLAIALRY 176
Query: 178 FIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADL 237
+ +L PGW+ +VI+SDA VPGEGEHKIM++IR QR P ++PNT HC+YGLDADL
Sbjct: 177 WTAFKLATDPGWKNLQVIISDATVPGEGEHKIMNFIRSQRADPEYNPNTTHCIYGLDADL 236
Query: 238 IMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPI 297
I L LATHE HF ILRE + +++ V + D D D+
Sbjct: 237 IFLGLATHEPHFKILREDVFAQDNRKRNNVKDTIDMT---------DEEKDLIRKQDS-- 285
Query: 298 HKKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIR 357
+K + +L+I VLREYL EL P PFP + ER +DD+VF+CFF GNDFLPH+P L++R
Sbjct: 286 -EKPFLWLHISVLREYLSAELWTPKLPFPFDLERAIDDWVFMCFFCGNDFLPHLPCLDVR 344
Query: 358 EGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQ--AY 415
E +I++L+ +++ + Y+T G++ L+ VE ++ + E IF+ R IQ+
Sbjct: 345 ENSIDILLDIWKSILPRLKTYMTCDGKLNLESVEMVLKELGNREGDIFKTR-HIQEIRKK 403
Query: 416 EYNEAMKLNARRESSEELLQAPVAVADTVKL 446
E NE K ++ S + P + +++
Sbjct: 404 EANERRKQQKQQNVSTGQDRHPTKFNEQLQM 434
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 96/203 (47%), Positives = 127/203 (62%), Gaps = 1/203 (0%)
Query: 429 SSEELLQAPVAVADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCR 488
S+ + + + VKL EPGY +RYY +KF I P +I + K +V Y+EG+ WV
Sbjct: 582 SNGGITSGVIDTDEAVKLFEPGYHDRYYIEKFHIE-PNQIPALSKHMVKCYIEGVSWVLM 640
Query: 489 YYYQDVCSWQWFYPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPE 548
YYYQ SW W+YPYHYAP A D D DL+I F LGEPF P++QLM LPAAS LPE
Sbjct: 641 YYYQGCASWTWYYPYHYAPLAEDFVDFHDLDIKFELGEPFLPYEQLMSVLPAASGHNLPE 700
Query: 549 KYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEE 608
+R LM+ S I FYP +F IDMNGK+ +WQG+ LPFIDE LL T+ FL+E+
Sbjct: 701 VFRPLMSSEDSEIIDFYPTEFPIDMNGKKMSWQGIALLPFIDETRLLTATRNQYKFLSED 760
Query: 609 ELFRNSVMLDLLYVHPQHPLYQQ 631
E RN+ +L + ++ Y++
Sbjct: 761 EKRRNTRNDPVLLISNKNVNYEK 783
>gi|363753664|ref|XP_003647048.1| hypothetical protein Ecym_5486 [Eremothecium cymbalariae
DBVPG#7215]
gi|356890684|gb|AET40231.1| hypothetical protein Ecym_5486 [Eremothecium cymbalariae
DBVPG#7215]
Length = 1002
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 200/436 (45%), Positives = 282/436 (64%), Gaps = 33/436 (7%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP+F+RW++ +YP I V+EE PQ+ +GV P+D S PNPNG E DNLYLDMNGI+
Sbjct: 1 MGVPSFFRWISRKYPKIISPVLEETPQI-VDGVKLPIDYSSPNPNG-ELDNLYLDMNGIV 58
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ KPAP + D + +F+Y + + + RPR++L +A+DGVAPRAKMNQQR+RRF
Sbjct: 59 HPCSHPENKPAPETEDQMLLEVFEYTNRVLNMARPRRVLMIAVDGVAPRAKMNQQRSRRF 118
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETC-DSNVITPGTQFMAVLSAALQYFI 179
R+A+DA A E+ R+ E E G+L+ K +T DSN ITPGT FM L+AAL+Y+
Sbjct: 119 RSARDAKFANEEKARVLAEREAYGELIDDSVKAKTTWDSNAITPGTPFMDKLAAALRYWT 178
Query: 180 QARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIM 239
+L PGW+ +VI+SDA VPGEGEHKIM++IR QR ++PNT HC+YGLDADLI
Sbjct: 179 SFKLATDPGWKHLQVIISDATVPGEGEHKIMNFIRSQRVDSQYNPNTTHCIYGLDADLIF 238
Query: 240 LSLATHEIHFSILREVI------TLPGQQEKCFVCGQ-VGHLAAECHGKPGDNPADWNGV 292
L LATHE HF ILRE + P QE + + HL + KP
Sbjct: 239 LGLATHEPHFKILREDVFAQDNRRRPRAQEMINMSEEDKQHLIEQDAEKP---------- 288
Query: 293 DDTPIHKKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMP 352
+ +L++ VLREYL EL + FP + ER +DD+VF+CFF GNDFLPH+P
Sbjct: 289 ---------FLWLHVSVLREYLAAELHVQRLSFPFDLERAIDDWVFMCFFCGNDFLPHLP 339
Query: 353 TLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKR---- 408
L++RE +I++L+ +++ ++ YLT GE+ L V+K ++ + E ++F+++
Sbjct: 340 CLDVRENSIDILVEIWKTVLPSLKTYLTCDGELNLAGVQKVLEQLGSREPELFKRKHEQE 399
Query: 409 TRIQQAYEYNEAMKLN 424
+R ++A E + +K N
Sbjct: 400 SRKKEAQERRKMLKNN 415
Score = 192 bits (488), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 113/294 (38%), Positives = 157/294 (53%), Gaps = 30/294 (10%)
Query: 358 EGAINLLMHVYRREFTAMGGYLTDA---------GEVLLDRVEKFIQSVAVYEDQIFQKR 408
EG L + +R G TDA V + RV + ++ E + +KR
Sbjct: 467 EGDKTALGALQKRSEENNGTIKTDAPDFSQEELRNAVEVSRVGNLSAAASLKERILAKKR 526
Query: 409 TRIQQAYEYNE--AMKLN-------ARRESSEELLQAPVAVADT-----------VKLGE 448
Q + E A +L A + E L P+ +T V L E
Sbjct: 527 KLAAQEEDGRESKAARLTTDAGAHQAGSDHQESQLDVPIMSKETPISGFIDTDKEVHLYE 586
Query: 449 PGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPF 508
PGY +RYY KF ++ID ++ D+ Y+EG+ WV YYYQ SW W+YPYHYAPF
Sbjct: 587 PGYHDRYYQAKFHAPT-KDIDSLRSDLARCYIEGIAWVLLYYYQGCPSWTWYYPYHYAPF 645
Query: 509 ASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPD 568
A+D ++SDL ++F LG+PF PF+QLMG LPAAS LP+ +R LM+DP S I F+P +
Sbjct: 646 AADFVNISDLVVSFDLGQPFLPFEQLMGVLPAASGHNLPDVFRPLMSDPDSEIIDFFPEE 705
Query: 569 FQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYV 622
F IDMNG++ AW+G+ LPFIDE+ L +K L++EE RN D+L +
Sbjct: 706 FAIDMNGEKMAWKGIALLPFIDEQRLRTAVRKQYHLLSDEEKARNVQRNDVLII 759
>gi|328865681|gb|EGG14067.1| 5'-3' exoribonuclease [Dictyostelium fasciculatum]
Length = 1157
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 205/426 (48%), Positives = 271/426 (63%), Gaps = 33/426 (7%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MG+PAF+RWL D+Y I E P+ D +G D S+ N NG EFDNLYLDMNGII
Sbjct: 1 MGIPAFFRWLVDKYGNVITPTKE--PR-DSDGSRLKCDFSELNVNG-EFDNLYLDMNGII 56
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ P P + D+ SI +Y+D +F ++RPRKL+Y+AIDGVAPRAKMNQQR RRF
Sbjct: 57 HPCAHPEKGPKPRNTQDMMDSIVEYLDLLFAIIRPRKLIYMAIDGVAPRAKMNQQRARRF 116
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLS------AKEKPET--CDSNVITPGTQFMAVLS 172
RAA D+ + + R E G L K+ E DSN ITPGT+FMA+++
Sbjct: 117 RAALDSRITKEQAARDLIERLNNGSLSQEDYDAIQKDGAEKYHFDSNCITPGTEFMALVA 176
Query: 173 AALQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYG 232
L+ ++ +++ P W+ KVI+SDA+VPGEGEHKIM YIR QR+ P ++PN +H +YG
Sbjct: 177 LTLRQYVAEKISTDPAWKDVKVIISDASVPGEGEHKIMEYIRHQRSQPDYNPNLKHVMYG 236
Query: 233 LDADLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPA---DW 289
LDADLIML+L+THE++F ILRE I P G P P+ D
Sbjct: 237 LDADLIMLALSTHEVNFDILREFIAPP---------------KGNRFGTPAPTPSKDVDE 281
Query: 290 NGVDDTPIHKKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLP 349
+ V D + K YQ LN+ +LREYL EL NPPF N ERI+DDF+F+CFFVGNDFLP
Sbjct: 282 DEVKDFLV--KDYQLLNLAILREYLDTELKC-NPPFEYNVERIIDDFIFICFFVGNDFLP 338
Query: 350 HMPTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRT 409
H+P+L+I EGAI+ LM +Y+ GYLTD GE+ LDR+ K ++ E+ I +R
Sbjct: 339 HLPSLQINEGAIDRLMRIYKELLPTFEGYLTDNGEIDLDRLRKVFVRLSREEEDILLRRK 398
Query: 410 RIQQAY 415
+ ++ +
Sbjct: 399 KKEERF 404
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 84/188 (44%), Positives = 110/188 (58%), Gaps = 10/188 (5%)
Query: 444 VKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPY 503
V +G G++ RYY FE P+ +++ + + YV+GL WV RYY+ CSW W+YPY
Sbjct: 572 VNIGSEGWRTRYYEHHFETEQPQ--NELVRAICQSYVDGLAWVLRYYFHGCCSWGWYYPY 629
Query: 504 HYAPFASDLKDLSDL--EITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLM------T 555
HYAPF DL + + E F LG PFRPF QLM LP AS +P+ YR +M
Sbjct: 630 HYAPFILDLAENGSMIVEPQFELGAPFRPFQQLMSVLPKASGQFVPKPYRTMMGISIDGE 689
Query: 556 DPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSV 615
D + I FYP +F ID+ + W+GV +LPFIDE LL K L+ LTE+E FRNS
Sbjct: 690 DRNDVILHFYPNEFLIDVAPGQPTWKGVCQLPFIDENELLSALKPLDNSLTEDEAFRNSH 749
Query: 616 MLDLLYVH 623
DL+ H
Sbjct: 750 GTDLIISH 757
>gi|241954112|ref|XP_002419777.1| 5'-3' exoribonuclease, putative [Candida dubliniensis CD36]
gi|223643118|emb|CAX41992.1| 5'-3' exoribonuclease, putative [Candida dubliniensis CD36]
Length = 978
Score = 384 bits (985), Expect = e-103, Method: Compositional matrix adjust.
Identities = 208/438 (47%), Positives = 282/438 (64%), Gaps = 27/438 (6%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEE-DPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGI 59
MGVPA +RWL+ +YP I VVEE D ++ G PNPNG E DNLYLDMNGI
Sbjct: 1 MGVPALFRWLSRKYPKIISPVVEEEDHEIGG------AKYENPNPNG-ETDNLYLDMNGI 53
Query: 60 IHPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRR 119
+HPC HP+ K P + D++F IF Y D + ++ RPRK+L +A+DGVAPRAKMNQQR RR
Sbjct: 54 VHPCSHPEHKKPPETEDEMFLDIFKYTDRVLMMARPRKVLMIAVDGVAPRAKMNQQRARR 113
Query: 120 FRAAKDAAEAEAEEERLRKEFEEAGKLLS-AKEKPETCDSNVITPGTQFMAVLSAALQYF 178
FRAAKDA + E KE E G++++ A + + DSN ITPGT FM L+ AL+Y+
Sbjct: 114 FRAAKDAELKAKQLEIEVKERELRGEIINDAIKGKKQWDSNAITPGTPFMDRLAEALRYW 173
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
+ +L+ PGW +VI+SDA VPGEGEHK+MS+IR QR+ P +DPNT+HC+YGLDADLI
Sbjct: 174 VAYKLSSDPGWANLQVIISDATVPGEGEHKLMSFIRSQRSDPQYDPNTKHCIYGLDADLI 233
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
L LATHE HF +LRE + Q +K + Q+ AE + GD A DD
Sbjct: 234 FLGLATHEPHFRVLREDV-FATQDKKFTIKDQI----AEANSNDGDVVAK----DD---- 280
Query: 299 KKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIRE 358
+K + +L++ VLREYLQ EL P FP ER +DD+VFLCFF GNDFLPH+P+L++R+
Sbjct: 281 RKPFLWLHVNVLREYLQVELFTPRMSFPFELERAIDDWVFLCFFAGNDFLPHLPSLDVRD 340
Query: 359 GAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYEYN 418
I+ L+ ++R + Y+T G++ L VE + ++A E +IF+ + +Q E N
Sbjct: 341 NGIDTLVQCWKRSLPILKDYVTCDGKLNLKSVEVLMSNLAYKESEIFKNKHAAEQRREEN 400
Query: 419 EAMKLNARRESSEELLQA 436
N RR+ ++E +A
Sbjct: 401 -----NKRRKLAQEQDRA 413
Score = 214 bits (546), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 116/267 (43%), Positives = 159/267 (59%), Gaps = 12/267 (4%)
Query: 380 TDAGEVLLDRVEKFIQSVAVYEDQIF------QKRTRIQQAYEYNEAMKLNARRESSEEL 433
+DA L ++ V V +DQI + T + E N++ R+ SEE
Sbjct: 473 SDAAAELKKLIDSKKTQVTVVQDQIATDSSANSETTTSESELEENQSDNSLKRKLESEEK 532
Query: 434 LQAPVAVADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQD 493
+D +KL EPGY +RYY KF + EEI++ K+DVV YVEG+ WV YYYQ
Sbjct: 533 DNKQTQ-SDDIKLWEPGYNKRYYEAKFHCQSDEEIEQTKRDVVRHYVEGIAWVALYYYQG 591
Query: 494 VCSWQWFYPYHYAPFASDLKDLSDL---EITFFLGEPFRPFDQLMGTLPAASSSALPEKY 550
SW W++PYHYAPFA+D +L +L + F LGEPFRPF+QLM LPAAS LP+ +
Sbjct: 592 CPSWNWYFPYHYAPFAADFTNLEELFPEGVKFKLGEPFRPFEQLMSVLPAASGHTLPQVF 651
Query: 551 RNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEEL 610
R+LM++P S I FYP +F+IDMNGK+ +WQG+ LPFIDEK LL +K LT +E+
Sbjct: 652 RDLMSNPDSEIIDFYPEEFEIDMNGKKMSWQGIPLLPFIDEKRLLDAVQKKYELLTPDEI 711
Query: 611 FRNSVMLDLLYVHPQHPLYQQI--TLY 635
RN+ L++ P + + + TLY
Sbjct: 712 SRNTNKEAELFISPANKNFSKFSETLY 738
>gi|407040013|gb|EKE39937.1| 5'-3' exonuclease domain containing protein [Entamoeba nuttalli
P19]
Length = 560
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 205/450 (45%), Positives = 287/450 (63%), Gaps = 40/450 (8%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP+F+RWL R+P IVD + G D+++PN +G+E+DN Y+DMNG+I
Sbjct: 1 MGVPSFFRWLKQRFPKIIVDCKPSSQEKYG-------DLNEPNASGVEYDNFYIDMNGLI 53
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPCFHP + +P +D+ + Y+D+I +VRPRKLLYLA+DGVAPRAKMNQQR+RRF
Sbjct: 54 HPCFHPQDRQSPEKIEDMMVLLTRYLDYIIDIVRPRKLLYLAVDGVAPRAKMNQQRSRRF 113
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSA-KEKP--ETCDSNVITPGTQFMAVLSAALQY 177
++AKDA AE LR+ + +L++ E P + DSN ITPGT+FM+V+S L+
Sbjct: 114 KSAKDAENAE-----LRQAEDNKKRLMNGLPEVPYVKPLDSNCITPGTEFMSVVSKTLKK 168
Query: 178 FIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADL 237
+I+ R++Q W VILSD+ VPGEGEHKIM +IR Q+ P ++PNT HC+YGLDADL
Sbjct: 169 YIKERMSQSSYWNKLVVILSDSGVPGEGEHKIMDFIRRQKESPDYNPNTHHCMYGLDADL 228
Query: 238 IMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPI 297
IMLSLATHE FSI+RE + + ++C++C V H +C + G DT I
Sbjct: 229 IMLSLATHERFFSIIREKVFF--EDDRCYICNGV-HPPDKCQRRKE------VGAMDTII 279
Query: 298 HKKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIR 357
K +QFL+ +LR YLQ L + FER VDDF+F CF VGNDFLPH+P+L+IR
Sbjct: 280 --KPFQFLHCHILRGYLQITLKVEG----FEFERCVDDFIFFCFLVGNDFLPHIPSLDIR 333
Query: 358 EGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYEY 417
+GA++LLM VY REF GGY+T++G + + + F+Q V E I +K+ + +
Sbjct: 334 DGAVDLLMKVY-REFLPHGGYITESGSLNVTNAKNFLQEVGKEEPAILEKKCQKE----- 387
Query: 418 NEAMKLNARRESSEELLQAPVAVADTVKLG 447
K+NA++ ++ Q + A K+
Sbjct: 388 ----KMNAKKNFDNQMKQLEMRKATIYKIN 413
>gi|68466241|ref|XP_722895.1| hypothetical protein CaO19.12150 [Candida albicans SC5314]
gi|68466536|ref|XP_722750.1| hypothetical protein CaO19.4681 [Candida albicans SC5314]
gi|74656669|sp|Q5AMG5.3|XRN2_CANAL RecName: Full=5'-3' exoribonuclease 2
gi|46444743|gb|EAL04016.1| hypothetical protein CaO19.4681 [Candida albicans SC5314]
gi|46444898|gb|EAL04170.1| hypothetical protein CaO19.12150 [Candida albicans SC5314]
Length = 968
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 206/443 (46%), Positives = 276/443 (62%), Gaps = 38/443 (8%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEE-DPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGI 59
MGVPA +RWL+ +YP I VVEE D ++ G PNPNG E DNLYLDMNGI
Sbjct: 1 MGVPALFRWLSRKYPKIISPVVEEEDHEIGG------AKYENPNPNG-EIDNLYLDMNGI 53
Query: 60 IHPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRR 119
+HPC HP+ K P + D++F IF Y D + ++ RPRK+L +A+DGVAPRAKMNQQR RR
Sbjct: 54 VHPCSHPEHKKPPETEDEMFLDIFKYTDRVLMMARPRKVLMIAVDGVAPRAKMNQQRARR 113
Query: 120 FRAAKDAA------EAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSA 173
FRAAKDA E E +E LR E + A + + DSN ITPGT FM L+
Sbjct: 114 FRAAKDAELKAKQLEIEVQERELRGEI-----INDAIKGKKQWDSNAITPGTPFMDRLAE 168
Query: 174 ALQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGL 233
AL+Y++ +L+ PGW +VI+SDA VPGEGEHK+MS+IR QR+ P +DPNT+HC+YGL
Sbjct: 169 ALRYWVAYKLSSDPGWANLQVIISDATVPGEGEHKLMSFIRSQRSDPQYDPNTKHCIYGL 228
Query: 234 DADLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVD 293
DADLI L LATHE HF +LRE + Q +K + Q+ A+ NG
Sbjct: 229 DADLIFLGLATHEPHFRVLREDV-FASQDKKFTIKDQIAD-------------ANSNGDT 274
Query: 294 DTPIHKKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPT 353
KK + +L++ VLREYLQ EL P FP ER +DD+VFLCFF GNDFLPH+P+
Sbjct: 275 VAKEDKKPFLWLHVNVLREYLQVELFTPRMSFPFELERAIDDWVFLCFFAGNDFLPHLPS 334
Query: 354 LEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQ 413
L++R+ I+ L+ ++R + Y+T G++ L VE + ++A E +IF+ + +Q
Sbjct: 335 LDVRDNGIDTLVQCWKRSLPILKDYVTCDGKLNLKSVEVLMSNLAYKESEIFKNKHAAEQ 394
Query: 414 AYEYNEAMKLNARRESSEELLQA 436
E N N RR+ ++E +A
Sbjct: 395 RREEN-----NKRRKLAQEQERA 412
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 120/295 (40%), Positives = 169/295 (57%), Gaps = 19/295 (6%)
Query: 380 TDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAY----EYNEAMKLNA--RRESSEEL 433
+DA L ++ V V +DQI + + E E N+ R+ EE
Sbjct: 472 SDAAAELKKLIDSKKTQVTVVQDQIATDSSANSETTTSESELEEIQSDNSLKRKLEPEED 531
Query: 434 LQAPVAVADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQD 493
Q +D +KL EPGY +RYY KF + EEI++ K+DVV YVEG+ WV YYYQ
Sbjct: 532 KQTQ---SDDIKLWEPGYNKRYYEAKFHYQSDEEIEQTKRDVVRHYVEGIAWVALYYYQG 588
Query: 494 VCSWQWFYPYHYAPFASDLKDLSDL---EITFFLGEPFRPFDQLMGTLPAASSSALPEKY 550
SW W++PYHYAPFA+D +L +L + F LGEPFRPF+QLM LPAAS LP+ +
Sbjct: 589 CPSWNWYFPYHYAPFAADFTNLEELFPEGVKFKLGEPFRPFEQLMSVLPAASGHTLPQVF 648
Query: 551 RNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEEL 610
R+LM++P S I FYP +F+IDMNGK+ +WQG+ LPFIDEK LL +K LT +E
Sbjct: 649 RDLMSNPDSEIIDFYPEEFEIDMNGKKMSWQGIPLLPFIDEKRLLDAVQKKYELLTPDEK 708
Query: 611 FRNSVMLDLLYVHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVNASGGMNGYIW 665
RN+ L++ P + + + + +LY + + F + A G++G I+
Sbjct: 709 SRNTNKEAELFISPANKNFSKFS--EKLYKENENEVTFKY-----AKSGLSGKIF 756
>gi|149236630|ref|XP_001524192.1| 5'-3' exoribonuclease 2 [Lodderomyces elongisporus NRRL YB-4239]
gi|146451727|gb|EDK45983.1| 5'-3' exoribonuclease 2 [Lodderomyces elongisporus NRRL YB-4239]
Length = 1049
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 210/444 (47%), Positives = 285/444 (64%), Gaps = 31/444 (6%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPA +RWL+ +YP I VVEED G PNPNG E DNLYLDMNGI+
Sbjct: 1 MGVPALFRWLSRKYPKIISPVVEEDQNEIG-----GAKYEDPNPNG-EIDNLYLDMNGIV 54
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ K AP + D++F IF Y D + ++ RPRK+L +A+DGVAPRAKMNQQR RRF
Sbjct: 55 HPCSHPEHKKAPETEDEMFLDIFTYTDRVLMMARPRKVLMIAVDGVAPRAKMNQQRARRF 114
Query: 121 RAAKDAAEAEAEEERLRKEFEEA---GKLL-SAKEKPETCDSNVITPGTQFMAVLSAALQ 176
R+A+DA + ++E + KE + G+L+ +A + + DSN ITPGT FM L+ AL+
Sbjct: 115 RSAQDA---KIKDEAIAKEIADKEFRGELIDNAVKVKKLWDSNAITPGTPFMDRLAEALR 171
Query: 177 YFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDAD 236
Y + +L PGW +VI+SDA VPGEGEHK+MS+IR QR+ P +DPNT+HC+YGLDAD
Sbjct: 172 YLVAYKLANDPGWANLQVIISDATVPGEGEHKLMSFIRSQRSDPQYDPNTKHCIYGLDAD 231
Query: 237 LIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTP 296
LI L LATHE HF +LRE + QEK H+A D + +
Sbjct: 232 LIFLGLATHEPHFRVLREDVF--ANQEKRMTISD--HVAMN---------KDQADLIEER 278
Query: 297 IHKKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEI 356
KK + +L++ VLREYL EL PN FP + ER +DD+VF+CFF GNDFLPH+P+L++
Sbjct: 279 DRKKPFLWLHVNVLREYLAVELHNPNMSFPFDLERAIDDWVFICFFAGNDFLPHLPSLDV 338
Query: 357 REGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYE 416
R+ I+ L++ ++R + Y+T G++ LD VE + +A+ ED+IF+ R RI+Q E
Sbjct: 339 RDNGIDTLVNCWKRCVPRLRDYVTSDGKLNLDSVEVLMADLAIKEDEIFRNRFRIEQRKE 398
Query: 417 YNEAMKLNARRESSEELLQAPVAV 440
E K RR+ +EE +A +V
Sbjct: 399 --EGRK---RRKLAEEQDKALKSV 417
Score = 204 bits (520), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 96/191 (50%), Positives = 131/191 (68%), Gaps = 3/191 (1%)
Query: 442 DTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFY 501
D ++L EPGY++RYY KF ++ EEI++ +++VV Y+EG+ WV YYYQ SW WFY
Sbjct: 551 DRLRLHEPGYQKRYYEVKFHCTSDEEIEETRRNVVRSYIEGISWVALYYYQGCPSWTWFY 610
Query: 502 PYHYAPFASDLKDLSDL---EITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPS 558
PYHYAPFA+D+ +L DL + F LG+PFRP++QLM LPAAS ALP+ + LMTDP
Sbjct: 611 PYHYAPFAADMTNLRDLFPEGVKFELGKPFRPYEQLMSVLPAASKHALPDAFHGLMTDPK 670
Query: 559 SPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLD 618
S + FYP DF+IDMNGK+ +WQG+ LPFI+E+ LL+ + L+E EL RN
Sbjct: 671 SEVIDFYPEDFEIDMNGKKMSWQGIPLLPFIEEERLLKAVQAKYSELSEYELSRNVNKEA 730
Query: 619 LLYVHPQHPLY 629
L++ Q+ Y
Sbjct: 731 ELFISNQNKNY 741
>gi|241602466|ref|XP_002405190.1| pacman protein, putative [Ixodes scapularis]
gi|215500574|gb|EEC10068.1| pacman protein, putative [Ixodes scapularis]
Length = 1112
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 222/592 (37%), Positives = 320/592 (54%), Gaps = 85/592 (14%)
Query: 92 LVRPRKLLYLAIDGVAPRAKMNQQRTRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKE 151
+++PRK ++A+DGVAPRAKMNQQR RRFR+AK+A L K+ G++L +
Sbjct: 1 MIKPRKTFFMAVDGVAPRAKMNQQRGRRFRSAKEALA-------LEKQALSRGEVLPTEA 53
Query: 152 KPETCDSNVITPGTQFMAVLSAALQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMS 211
+ DSN I+PGT FMA L L+ F+ +++ P WQ KV LS PGEGEHKIM
Sbjct: 54 R---FDSNCISPGTSFMANLQEQLEQFVAMKISSDPLWQEVKVYLSGHQTPGEGEHKIMD 110
Query: 212 YIRLQRNLPGFDPNTRHCLYGLDADLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQV 271
+IR +R+ PG+DPNTRHCLYGLDADLIML +HE HF++LRE I +Q
Sbjct: 111 FIRTERSKPGYDPNTRHCLYGLDADLIMLGTCSHEPHFALLREEIVYGKKQ--------- 161
Query: 272 GHLAAECHGKPGDNPADWNGVDDTPIHKKKYQFLNIWVLREYLQYELDI--PNPPFPINF 329
N N ++ H L++ +LREYL YE + PF +
Sbjct: 162 -------------NQKRLNVPEEITFH-----LLHLSLLREYLSYEFQAVKDSLPFEFSL 203
Query: 330 ERIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDR 389
E +VDD+V +CF VGNDFLPH+P L I A+ +L Y +GGY+ + G + L+R
Sbjct: 204 ESLVDDWVLMCFLVGNDFLPHLPNLHIAHNALPILYQAYIEVLPTLGGYINEQGTLNLER 263
Query: 390 VEKFIQSVAVYEDQIFQKRTRIQQAYEYNEAMKLNA-------------------RRESS 430
EKF++ ++ ++ ++K T +Q ++ E+ + A R+
Sbjct: 264 FEKFLKRLSQFD---YEKFTDVQADQKFLESKRTAATAPNGVVSQDSQDKAARDKERDPD 320
Query: 431 EE--LLQAPVAVADTVKLGEPGY-----------------KERYYADKFEISNPEEIDKV 471
E+ +L +P + L P Y K YY K E + + +V
Sbjct: 321 EQRKVLLSPGLLEKFSHLDIPDYESDEESEGTLEMEFRQHKRDYYTTKLEYKDVNK--EV 378
Query: 472 KKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDLEITFFLGEPFRPF 531
++ YV + W YYY V SW W+YP+HY+P+ SD+KD ++++F LG+PF PF
Sbjct: 379 MQEQAHGYVRAIQWNLHYYYNGVQSWNWYYPHHYSPYISDIKDFQSIDMSFELGKPFLPF 438
Query: 532 DQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDE 591
QLM LPAAS +P+ Y+ LM SP+ +YP DF D+NGK+ W+ VV +PFIDE
Sbjct: 439 QQLMSILPAASKGLVPKAYQALMEGEESPVLDYYPQDFTTDLNGKQQEWEAVVLIPFIDE 498
Query: 592 KLLLRQTKKLEVFLTEEELFRNSVMLDLLYVHPQHPLYQQITLYCQLYHQLP 643
LL ++L+ LT+EE RN+ LL+ + P+ +L C+ LP
Sbjct: 499 DRLLPVMQELDSKLTDEERERNTHGGHLLFTYSHEPV---TSLKCKNKGLLP 547
>gi|207341239|gb|EDZ69347.1| YOR048Cp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 1006
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 199/428 (46%), Positives = 277/428 (64%), Gaps = 21/428 (4%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP+F+RWL+ +YP I V+EE PQ+ +GV P+D S PNPNG E DNLYLDMNGI+
Sbjct: 1 MGVPSFFRWLSRKYPKIISPVLEEQPQI-VDGVILPLDYSAPNPNG-ELDNLYLDMNGIV 58
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ KP P + D++ ++F+Y + + + RPRK+L +A+DGVAPRAKMNQQR RRF
Sbjct: 59 HPCSHPENKPPPETEDEMLLAVFEYTNRVLNMARPRKVLVMAVDGVAPRAKMNQQRARRF 118
Query: 121 RAAKDAA-EAEAEEERLRKEFEEAGKLLS-AKEKPETCDSNVITPGTQFMAVLSAALQYF 178
R+A+DA E EA EE +R+ EE G+++ A +T DSN ITPGT FM L+AAL+Y+
Sbjct: 119 RSARDAQIENEAREEIMRQR-EEVGEIIDDAVRNKKTWDSNAITPGTPFMDKLAAALRYW 177
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
+L PGW+ +VI+SDA VPGEGEHKIM++IR QR P ++PNT HC+YGLDAD
Sbjct: 178 TAFKLATDPGWKNLQVIISDATVPGEGEHKIMNFIRSQRADPEYNPNTTHCIYGLDADFN 237
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
L L THE HF ILRE + +++ + + E N
Sbjct: 238 FLGLTTHEPHFKILREDVFAQDNRKRNNLKDTINMTEEEKQFLQKQN------------S 285
Query: 299 KKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIRE 358
++ + +L+I VLREYL EL +P PF + ER +DD+VF+CFF GNDFLPH+P L++RE
Sbjct: 286 EQPFLWLHINVLREYLSAELWVPGLPFTFDLERAIDDWVFMCFFCGNDFLPHLPCLDVRE 345
Query: 359 GAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKR----TRIQQA 414
+I++L+ +++ + Y+T G + L VE +Q + E IF+ R R ++A
Sbjct: 346 NSIDILLDIWKVVLPKLKTYMTCDGVLNLPSVETLLQHLGSREGDIFKTRHIQEARKKEA 405
Query: 415 YEYNEAMK 422
+E +A K
Sbjct: 406 FERRKAQK 413
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 92/190 (48%), Positives = 126/190 (66%), Gaps = 1/190 (0%)
Query: 444 VKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPY 503
VKL EPGY ERYY KF ++ P++I++++KD+V Y+EG+ WV YYYQ SW WFYPY
Sbjct: 597 VKLFEPGYHERYYTAKFHVT-PQDIEQLRKDMVKCYIEGVAWVLMYYYQGCASWNWFYPY 655
Query: 504 HYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYK 563
HYAP A+D S LEI F G PF P++QLM LPAAS ALP+ +R+LM++P S I
Sbjct: 656 HYAPLATDFHGFSHLEIKFEEGTPFLPYEQLMSVLPAASGHALPKIFRSLMSEPDSEIID 715
Query: 564 FYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVH 623
FYP +F IDMNGK+ +WQG+ LPFID+ LL + L++ E RN +L +
Sbjct: 716 FYPEEFPIDMNGKKMSWQGIALLPFIDQDRLLTAVRAQYPLLSDAERARNIRGEPVLLIS 775
Query: 624 PQHPLYQQIT 633
++ Y++ +
Sbjct: 776 NKNANYERFS 785
>gi|427788379|gb|JAA59641.1| Putative 5'-3' exonuclease hke1/rat1 [Rhipicephalus pulchellus]
Length = 1628
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 220/570 (38%), Positives = 320/570 (56%), Gaps = 77/570 (13%)
Query: 92 LVRPRKLLYLAIDGVAPRAKMNQQRTRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKE 151
+++P+K ++A+DGVAPRAKMNQQR RRF++AK EA+A+E KE + G++L +E
Sbjct: 1 MIKPKKTFFMAVDGVAPRAKMNQQRGRRFKSAK---EAQAQE----KEARDRGEVLPTEE 53
Query: 152 KPETCDSNVITPGTQFMAVLSAALQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMS 211
+ DSN I+PGT+FMA L LQ F+ +++ P W+ KV LS PGEGEHK+M
Sbjct: 54 R---FDSNCISPGTEFMARLQDQLQQFVATKVSTDPLWRGVKVYLSGHQTPGEGEHKVMD 110
Query: 212 YIRLQRNLPGFDPNTRHCLYGLDADLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQV 271
+IR +R+ PG+DPNTRHCLYGLDADLIML + +HE HF++LRE I +Q
Sbjct: 111 FIRTERSQPGYDPNTRHCLYGLDADLIMLGMCSHEPHFALLREEIVYGKRQ--------- 161
Query: 272 GHLAAECHGKPGDNPADWNGVDDTPIHKKKYQFLNIWVLREYLQYELD--IPNPPFPINF 329
N N ++ H L++ +LREYL+ E PF
Sbjct: 162 -------------NQKRLNVPEEITFH-----LLHLSLLREYLELEFQELKKTIPFEFKM 203
Query: 330 ERIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDR 389
+ I+DD+V +CF VGNDFLPH+P L I A+ +L Y ++GGY+ + G++ L+R
Sbjct: 204 DNIIDDWVLMCFLVGNDFLPHLPNLHIAHNALPVLYQAYIDVMPSLGGYINEYGKLNLER 263
Query: 390 VEKFIQSVAVYEDQIF------QKRTRIQQAYEY--NEAMKLNARRESSEELLQAPVAVA 441
EKF+ ++ ++ + F QK ++AY N ++ N S +E + P
Sbjct: 264 FEKFLTRLSQFDYEKFTDVQADQKFLASKRAYAEAPNGIVQQNGSPPSGKEKTKDP---- 319
Query: 442 DTVKLGEP------------------------GYKERYYADKFEISNPEEIDKVKKDVVL 477
D +L E +K YY +K E ++ + +V ++
Sbjct: 320 DEKRLLEKFSHLDIPDFDSDEDQEGLLEMEFRQHKRDYYVNKLEYADVNK--EVMQEQAH 377
Query: 478 KYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGT 537
YV + W YYY V SW W+YP+HY+P+ SD+KD +L++TF LG+PF PF QLM
Sbjct: 378 GYVRAIQWNLHYYYNGVQSWNWYYPHHYSPYISDIKDFQNLDMTFELGKPFLPFQQLMAI 437
Query: 538 LPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQ 597
LP+AS +P Y++LM + SPI +YP DF D+NGK+ W+ VV +PFI+E LL
Sbjct: 438 LPSASKKLVPSAYQDLMENEESPILDYYPKDFNTDLNGKQHDWEAVVLIPFIEEGRLLPA 497
Query: 598 TKKLEVFLTEEELFRNSVMLDLLYVHPQHP 627
++ LTEEE RN LL+V+ + P
Sbjct: 498 MEERFEKLTEEEKSRNGHSGHLLFVYSEEP 527
>gi|302309530|ref|NP_986969.2| AGR303Wp [Ashbya gossypii ATCC 10895]
gi|442570294|sp|Q74ZA0.4|XRN2_ASHGO RecName: Full=5'-3' exoribonuclease 2
gi|299788402|gb|AAS54793.2| AGR303Wp [Ashbya gossypii ATCC 10895]
gi|374110220|gb|AEY99125.1| FAGR303Wp [Ashbya gossypii FDAG1]
Length = 945
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 197/429 (45%), Positives = 281/429 (65%), Gaps = 19/429 (4%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP+F+RWL+ +YP I V+E+ PQV +GV P+D S NPNG E DNLYLDMNGI+
Sbjct: 1 MGVPSFFRWLSRKYPKIISPVIEDTPQV-VDGVKLPIDYSAANPNG-ELDNLYLDMNGIV 58
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ KPAP + D++ ++F+Y + + + RPRK+L +A+DGVAPRAKMNQQR+RRF
Sbjct: 59 HPCSHPENKPAPETEDEMLLAVFEYTNRVLNMARPRKVLMIAVDGVAPRAKMNQQRSRRF 118
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLS-AKEKPETCDSNVITPGTQFMAVLSAALQYFI 179
R+A+DA A E+ R+ E E G+++ A + ++ D+N ITPGT FM L+AAL+Y+
Sbjct: 119 RSARDAKLANEEKARVLAEREAYGEMIDDAVKAKKSWDTNAITPGTPFMDKLAAALRYWT 178
Query: 180 QARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIM 239
+L PGW+ +VI+SDA VPGEGEHKIM++IR QR ++PNT HC+YGLDADLI
Sbjct: 179 SFKLATDPGWKNLQVIISDATVPGEGEHKIMNFIRSQRADVQYNPNTTHCIYGLDADLIF 238
Query: 240 LSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIHK 299
L LATHE HF ILRE + + + + A E + +
Sbjct: 239 LGLATHEPHFKILREDVFAQDNRRRPRQHDMMDMSAEEKQALIEQD------------AE 286
Query: 300 KKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREG 359
K + +L++ VLREYL EL +P PF + ER +DD+VF+CFF GNDFLPH+P+L++RE
Sbjct: 287 KPFLWLHVSVLREYLSAELLVPRLPFHFDLERAIDDWVFMCFFCGNDFLPHLPSLDVREN 346
Query: 360 AINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKR----TRIQQAY 415
+I++L+ +++ ++ YLT G++ L VEK + + E IF+K+ R ++A
Sbjct: 347 SIDILVDIWKAVLPSLKTYLTCDGKLNLKGVEKVLAQLGNRESDIFKKKYEQELRKKEAQ 406
Query: 416 EYNEAMKLN 424
E + +K N
Sbjct: 407 ERRKMLKNN 415
Score = 205 bits (522), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 111/250 (44%), Positives = 146/250 (58%), Gaps = 12/250 (4%)
Query: 444 VKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPY 503
V+L EPGY +RYY KF + ID ++K VV YVEG+ WV YYYQ SW W+YPY
Sbjct: 583 VRLFEPGYHDRYYQAKFHVPT-GSIDALRKKVVRSYVEGISWVLLYYYQGCPSWTWYYPY 641
Query: 504 HYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYK 563
HYAPFASD +SDL +TF LGEPF P++QLM LPAASS LP+ +R+LM+DP S IY
Sbjct: 642 HYAPFASDFTGISDLSVTFDLGEPFLPYEQLMSVLPAASSHNLPDVFRSLMSDPESEIYD 701
Query: 564 FYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVH 623
FYP +F IDMNG++ AW+ +V LPFIDE LL ++ L+E E RN ++L +
Sbjct: 702 FYPEEFPIDMNGEKMAWKALVLLPFIDETRLLAAVRQKYPLLSEAERARNVRRDEVLLIS 761
Query: 624 PQHPLYQQITLYCQLYHQLPPQ----DRFAWEIDVNASGGMNGYIWLCERNGLRSIIPSP 679
++ Y++ +LY PQ F + A G+ R + + P
Sbjct: 762 NKNTHYER--FLARLYTDPAPQPVNFRHFKSGLAGTALSDAEGF-----RPNTKMLCPLA 814
Query: 680 VKGLPDIERN 689
LPDI N
Sbjct: 815 AGSLPDISTN 824
>gi|294884783|gb|ADF47407.1| exoribonuclease-2, partial [Dugesia japonica]
Length = 801
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 236/611 (38%), Positives = 328/611 (53%), Gaps = 86/611 (14%)
Query: 144 GKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQARLNQIPGWQFTKVILSDANVPG 203
GKL K E DSN ITPGT FMA L+ ALQY++ +LN PGW+ +VILSDAN PG
Sbjct: 1 GKLPEPKSASEHFDSNCITPGTPFMARLTIALQYYVYNKLNSDPGWKNIQVILSDANAPG 60
Query: 204 EGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIMLSLATHEIHFSILREVITLPGQQE 263
EGEHKIM YIR QR P DPNT+HCL G DADLIML LATHE +F+I+RE P Q
Sbjct: 61 EGEHKIMDYIRRQRASPTHDPNTKHCLCGADADLIMLGLATHEPYFTIIREEFK-PNQPR 119
Query: 264 KCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIHKKKYQFLNIWVLREYLQYELDIPNP 323
C +CGQ+ H+ EC G P A++N + + ++ F+++ LREYLQ EL IPN
Sbjct: 120 PCEICGQMDHVMTECAGLPS---AEFNIAANNKGSETEFIFIHLNTLREYLQQELVIPNL 176
Query: 324 PFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHVYRREFTAMGGYLTDAG 383
F +FER VDD+VF+CFFVGNDFLPH+P+LEIRE AI+ L+ +Y+ + G+LTD+G
Sbjct: 177 HFQYDFERAVDDWVFMCFFVGNDFLPHLPSLEIREKAIDRLITIYKSSVSKTNGWLTDSG 236
Query: 384 EVLLDRVEKFIQSVAVYEDQIFQ--------------------KRTRIQQAYEYNE---- 419
+V + RV+ ++ +A+ ED+IF+ KR ++ + +N+
Sbjct: 237 KVNISRVQLIMKDLALLEDEIFKNRRENEVSFRRRNRENRNRTKRQKLNENAMFNQHSTD 296
Query: 420 -------------AMKLNARRESSEELLQAPVAVADTVKLGEPGYKERYYADKFEISNPE 466
+ K NA ES L + P +R + D + + +
Sbjct: 297 FVNLSSGERFSRDSFKNNAIMESKNNLNKQVGPQVPASNTRAPA--KRKFDDDIDPEDKK 354
Query: 467 EIDKVKKDVVLKYVEGLCWVCRYYYQ----------DVC-----------SWQWFYPY-- 503
+ K+D V + +G + RYY D C W Y Y
Sbjct: 355 NEELDKRDEVKLWEDG--YRSRYYQSKFGVSVDENPDFCVNVAHQYLRGLCWVLAYYYQG 412
Query: 504 ----------HYAPFASDLKDLSDLEITF-FLGEPFRPFDQLMGTLPAASSSALPEKYRN 552
HYAPFA D +LS+ ++TF +PF P +QLMG PA S S +P +++
Sbjct: 413 CVSWTWYYPYHYAPFAVDFVNLSEADVTFEKKTKPFNPLEQLMGVFPADSKSHVPPVWQD 472
Query: 553 LMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFR 612
LMTD SP+ YP +F+ID+NGKR+ W GV LPF+DE LL+ K+ LTE+E R
Sbjct: 473 LMTDSESPVIDLYPTNFKIDLNGKRYDWMGVALLPFVDEVRLLQVLKERYSMLTEDEKER 532
Query: 613 NSVMLDLLYVHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVNASGGMNGYIWLCERN-G 671
N + D +V HP+ I + +L +D ID + + G+ G IW ++
Sbjct: 533 NVIGPDRYFVRSDHPVADLIKVIYEL------EDNSDSVIDPSLTNGVVGRIWKDLKSYQ 586
Query: 672 LRSIIPSPVKG 682
S + SP+ G
Sbjct: 587 PGSTVNSPITG 597
>gi|427780147|gb|JAA55525.1| Putative 5'-3' exonuclease hke1/rat1 [Rhipicephalus pulchellus]
Length = 1163
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 220/570 (38%), Positives = 320/570 (56%), Gaps = 77/570 (13%)
Query: 92 LVRPRKLLYLAIDGVAPRAKMNQQRTRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKE 151
+++P+K ++A+DGVAPRAKMNQQR RRF++AK EA+A+E KE + G++L +E
Sbjct: 1 MIKPKKTFFMAVDGVAPRAKMNQQRGRRFKSAK---EAQAQE----KEARDRGEVLPTEE 53
Query: 152 KPETCDSNVITPGTQFMAVLSAALQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMS 211
+ DSN I+PGT+FMA L LQ F+ +++ P W+ KV LS PGEGEHK+M
Sbjct: 54 R---FDSNCISPGTEFMARLQDQLQQFVATKVSTDPLWRGVKVYLSGHQTPGEGEHKVMD 110
Query: 212 YIRLQRNLPGFDPNTRHCLYGLDADLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQV 271
+IR +R+ PG+DPNTRHCLYGLDADLIML + +HE HF++LRE I +Q
Sbjct: 111 FIRTERSQPGYDPNTRHCLYGLDADLIMLGMCSHEPHFALLREEIVYGKRQ--------- 161
Query: 272 GHLAAECHGKPGDNPADWNGVDDTPIHKKKYQFLNIWVLREYLQYELD--IPNPPFPINF 329
N N ++ H L++ +LREYL+ E PF
Sbjct: 162 -------------NQKRLNVPEEITFH-----LLHLSLLREYLELEFQELKKTIPFEFKM 203
Query: 330 ERIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDR 389
+ I+DD+V +CF VGNDFLPH+P L I A+ +L Y ++GGY+ + G++ L+R
Sbjct: 204 DNIIDDWVLMCFLVGNDFLPHLPNLHIAHNALPVLYQAYIDVMPSLGGYINEYGKLNLER 263
Query: 390 VEKFIQSVAVYEDQIF------QKRTRIQQAYEY--NEAMKLNARRESSEELLQAPVAVA 441
EKF+ ++ ++ + F QK ++AY N ++ N S +E + P
Sbjct: 264 FEKFLTRLSQFDYEKFTDVQADQKFLASKRAYAEAPNGIVQQNGSPPSGKEKTKDP---- 319
Query: 442 DTVKLGEP------------------------GYKERYYADKFEISNPEEIDKVKKDVVL 477
D +L E +K YY +K E ++ + +V ++
Sbjct: 320 DEKRLLEKFSHLDIPDFDSDEDQEGLLEMEFRQHKRDYYVNKLEYADVNK--EVMQEQAH 377
Query: 478 KYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGT 537
YV + W YYY V SW W+YP+HY+P+ SD+KD +L++TF LG+PF PF QLM
Sbjct: 378 GYVRAIQWNLHYYYNGVQSWNWYYPHHYSPYISDIKDFQNLDMTFELGKPFLPFQQLMAI 437
Query: 538 LPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQ 597
LP+AS +P Y++LM + SPI +YP DF D+NGK+ W+ VV +PFI+E LL
Sbjct: 438 LPSASKKLVPSAYQDLMENEESPILDYYPKDFNTDLNGKQHDWEAVVLIPFIEEGRLLPA 497
Query: 598 TKKLEVFLTEEELFRNSVMLDLLYVHPQHP 627
++ LTEEE RN LL+V+ + P
Sbjct: 498 MEERFEKLTEEEKSRNGHSGHLLFVYSKEP 527
>gi|359479538|ref|XP_002272207.2| PREDICTED: 5'-3' exoribonuclease 3-like [Vitis vinifera]
Length = 1072
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 192/348 (55%), Positives = 244/348 (70%), Gaps = 36/348 (10%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP+FYRWL ++YP +V VE++ + S NPNG+EFDNLYLDMNGII
Sbjct: 1 MGVPSFYRWLVNKYPEIVVRAVEDERES-----------SSANPNGIEFDNLYLDMNGII 49
Query: 61 HPCFHPDGKP-APTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRR 119
HPCFHP+ + PT++++VF ++++YID IF +VRPRKLLY+AIDGVAPRAKMNQQR RR
Sbjct: 50 HPCFHPEDQIFPPTTFEEVFNNMYEYIDRIFSIVRPRKLLYMAIDGVAPRAKMNQQRRRR 109
Query: 120 FRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFI 179
F+ AKD AEAEE+RLR++FE GK L K++ + D N+ITPGT FM +S ALQ +I
Sbjct: 110 FQTAKDNEIAEAEEQRLRRQFEMEGKPLVPKQESQVSDPNIITPGTVFMHEVSKALQQYI 169
Query: 180 QARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIM 239
+R+ GW+ KVILSD+NVPGEGEHKIMS+IRLQR+LP ++PNT HCLYGLDADLIM
Sbjct: 170 CSRMKHEAGWKDLKVILSDSNVPGEGEHKIMSFIRLQRSLPDYNPNTLHCLYGLDADLIM 229
Query: 240 LSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIHK 299
L+LATHE+HFSILRE + Q+ C A E +P
Sbjct: 230 LALATHEVHFSILREDVLTLEQRGSC-------ESAVE--------------TKTSPPKA 268
Query: 300 KKYQFLNIWVLREYLQYELDIPNPPFP---INFERIVDDFVFLCFFVG 344
FL++W+LREYL+ ++ I +PP INFERIVDDF+FLCFF+G
Sbjct: 269 NSSLFLHVWILREYLELDMKISDPPEKLKEINFERIVDDFIFLCFFLG 316
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 119/278 (42%), Positives = 165/278 (59%), Gaps = 9/278 (3%)
Query: 416 EYNEAMKLNARRESSEELLQAPVAVADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDV 475
E + +K N R +S +L ++ D V+LG PG+KERYY +K + I+ +K++
Sbjct: 565 EMKKRLKENIRAKS--DLWRSGSLGIDRVRLGHPGWKERYYKEKCSCDTSQGIESTRKEL 622
Query: 476 VLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLM 535
V KY EGL WV +YY+ V SW WFYPYHY PFASD K LS ++ F G PF+PFDQLM
Sbjct: 623 VQKYTEGLLWVLQYYFSGVPSWTWFYPYHYGPFASDFKGLSRVKGKFERGSPFKPFDQLM 682
Query: 536 GTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLL 595
G LP +S+ ALP+ Y+ LM D S I FY +F++D +GKRF WQG+ KLPFIDE LL
Sbjct: 683 GVLPPSSAHALPKAYQPLMIDEDSNIIDFYNTNFEVDTDGKRFIWQGICKLPFIDEARLL 742
Query: 596 RQTKKLEVFLTEEELFRNSVMLDLLYVHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVN 655
+T+KLE L ++E RN+ D L++ L Y + P +ID N
Sbjct: 743 AETRKLEKELEDQEAVRNARSFDQLFLRFSDKLR---LFYTEQVSCRKPNK--TAKIDSN 797
Query: 656 ASGGMNGYIWLCERNGLRSIIPSPV-KGLPDIERNQAM 692
S G+NGYI + NGL + + + K L +I+ + +
Sbjct: 798 FSLGINGYICF-DNNGLNMMNSTCLDKNLENIQEDDVI 834
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 41/66 (62%), Gaps = 8/66 (12%)
Query: 357 REGAINLLMHVYRREFTAMGGYLTD--------AGEVLLDRVEKFIQSVAVYEDQIFQKR 408
R GAI+LLM VY++EF +GGY+ D V L RVEKFI V YE++IF+KR
Sbjct: 405 RMGAIDLLMTVYKKEFKNIGGYMVDMERIEEKKGSFVKLKRVEKFILLVGTYEEKIFKKR 464
Query: 409 TRIQQA 414
++ +
Sbjct: 465 MALRDS 470
>gi|123477106|ref|XP_001321722.1| XRN 5'-3' exonuclease N-terminus family protein [Trichomonas
vaginalis G3]
gi|121904554|gb|EAY09499.1| XRN 5'-3' exonuclease N-terminus family protein [Trichomonas
vaginalis G3]
Length = 702
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 243/642 (37%), Positives = 351/642 (54%), Gaps = 67/642 (10%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVE----EDPQVDGEGVARPVDVSKPNPNG---MEFDNLY 53
MGVP+F+RWL YPL + +E EDP S+PNPN +EFDNLY
Sbjct: 1 MGVPSFFRWLKGHYPLLLSQCIETELDEDP-------------SQPNPNTEGDVEFDNLY 47
Query: 54 LDMNGIIHPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMN 113
LDMNG+IHPC+HP + P +Y +VF+++ Y+D IF LVRPRK+L++A+DGVAPRAKMN
Sbjct: 48 LDMNGLIHPCYHPKNQEHPKTYLEVFQNVEKYVDRIFNLVRPRKVLFMAVDGVAPRAKMN 107
Query: 114 QQRTRRFRAAKDAAEAE-AEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLS 172
QQR RRF AAKD+ + + L EE +++ + ++ D+N ITPGT+FM LS
Sbjct: 108 QQRIRRFCAAKDSEYNRYMQCQDLSITKEEIDEIMDPQTIIQS-DTNTITPGTEFMMQLS 166
Query: 173 AALQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYG 232
+ I + P W VI SDA+VPGEGEHKIM +IR QR +D + HC+YG
Sbjct: 167 DYITEMINRKQKTSPAWSNIAVIFSDASVPGEGEHKIMEFIRSQRVEFNYDFSRHHCVYG 226
Query: 233 LDADLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGV 292
LDAD + L L+ HE+ F+ILRE + V +L G+ G PA
Sbjct: 227 LDADFLFLGLSCHELFFTILREEVF------------NVENLTPPA-GRFG--PA----- 266
Query: 293 DDTPIHKKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMP 352
K+ F N +V R+YL+ +L F FER +DD +FLC GNDFLP +P
Sbjct: 267 --------KFLFANGFVFRQYLERDLKPAKMGFDWYFERALDDIIFLCVTAGNDFLPQIP 318
Query: 353 TLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQ 412
+ I G+I + +Y++ +GGY+TD G V R KF+ S+ E+ Q I
Sbjct: 319 GMNILGGSIGKIFELYKKILPELGGYITDNGNVDCKRAAKFLHSLVDSEEIALQG---IM 375
Query: 413 QAYEYNEAMKLNARR---ESSEELLQAPVAVADTVKLGEP-----GYKERYYADKFEISN 464
++ +N + ++ + P ++ + L +P ++RYY +K +
Sbjct: 376 NPSNLSKEASINTNKIYQNDYSQIEKVPRPISSEITLEKPDDAFENLQQRYYKEKHGF-D 434
Query: 465 PEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDLEITFFL 524
++++KV KDV + Y++G+ W +YY SW W+YPY+YAP S + L +L+I +
Sbjct: 435 EKDVEKV-KDVCINYLKGMAWTLQYYLHGCTSWSWYYPYYYAPLLSSFELLENLDINLSV 493
Query: 525 ---GEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQ 581
+P P +QLM LP SS LP+ LM SP+ K+YP F IDM G W+
Sbjct: 494 LDDSKPIPPLEQLMSVLPPQSSHLLPQNMAELMKK-GSPLEKYYPTTFSIDMMGGHQPWK 552
Query: 582 GVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVH 623
G+ +P ID + L + K ++ LT+EE RN ++V
Sbjct: 553 GITFIPIIDGEFLEKTLKDSKIILTDEEEKRNKTGFVKVFVQ 594
>gi|238881714|gb|EEQ45352.1| 5'-3' exoribonuclease 2 [Candida albicans WO-1]
Length = 968
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 205/443 (46%), Positives = 276/443 (62%), Gaps = 38/443 (8%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEE-DPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGI 59
MGVPA +RWL+ +YP I VVEE D ++ G PNPNG E DNLYLDMNGI
Sbjct: 1 MGVPALFRWLSRKYPKIISPVVEEEDHEIGG------AKYENPNPNG-ETDNLYLDMNGI 53
Query: 60 IHPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRR 119
+HPC HP+ K P + D++F IF Y D + ++ RPRK+L +A+DGVAPRAKMNQQR RR
Sbjct: 54 VHPCSHPEHKKPPETEDEMFLDIFKYTDRVLMMARPRKVLMIAVDGVAPRAKMNQQRARR 113
Query: 120 FRAAKDAA------EAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSA 173
FRAAKDA E E +E LR E + A + + DSN ITPGT FM L+
Sbjct: 114 FRAAKDAELKAKQLEIEVQERELRGEI-----INDAIKGKKQWDSNAITPGTPFMDRLAE 168
Query: 174 ALQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGL 233
AL+Y++ +L+ PGW +VI+SDA VPGEGEHK+M++IR QR+ P +DPNT+HC+YGL
Sbjct: 169 ALRYWVAYKLSSDPGWANLQVIISDATVPGEGEHKLMNFIRSQRSDPQYDPNTKHCIYGL 228
Query: 234 DADLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVD 293
DADLI L LATHE HF +LRE + Q +K + Q+ A+ NG
Sbjct: 229 DADLIFLGLATHEPHFRVLREDV-FASQDKKFTIKDQIAE-------------ANSNGDT 274
Query: 294 DTPIHKKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPT 353
KK + +L++ VLREYLQ EL P FP ER +DD+VFLCFF GNDFLPH+P+
Sbjct: 275 VAKEDKKPFLWLHVNVLREYLQVELFTPRMSFPFELERAIDDWVFLCFFAGNDFLPHLPS 334
Query: 354 LEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQ 413
L++R+ I+ L+ ++R + Y+T G++ L VE + ++A E +IF+ + +Q
Sbjct: 335 LDVRDNGIDTLVQCWKRSLPILKDYVTCDGKLNLKSVEVLMSNLAYKESEIFKNKHAAEQ 394
Query: 414 AYEYNEAMKLNARRESSEELLQA 436
E N N RR+ ++E +A
Sbjct: 395 RREEN-----NKRRKLAQEQERA 412
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 120/295 (40%), Positives = 169/295 (57%), Gaps = 19/295 (6%)
Query: 380 TDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAY----EYNEAMKLNA--RRESSEEL 433
+DA L ++ V V +DQI + + E E N+ R+ EE
Sbjct: 472 SDAAAELKKLIDSKKTQVTVVQDQIATDSSANSETTTSESELEEIQSDNSLKRKLEPEED 531
Query: 434 LQAPVAVADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQD 493
Q +D +KL EPGY +RYY KF + EEI++ K+DVV YVEG+ WV YYYQ
Sbjct: 532 KQTQ---SDDIKLWEPGYNKRYYEAKFHCQSDEEIEQTKRDVVRHYVEGIAWVALYYYQG 588
Query: 494 VCSWQWFYPYHYAPFASDLKDLSDL---EITFFLGEPFRPFDQLMGTLPAASSSALPEKY 550
SW W++PYHYAPFA+D +L +L + F LGEPFRPF+QLM LPAAS LP+ +
Sbjct: 589 CPSWNWYFPYHYAPFAADFTNLEELFPEGVKFKLGEPFRPFEQLMSVLPAASGHTLPQVF 648
Query: 551 RNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEEL 610
R+LM++P S I FYP +F+IDMNGK+ +WQG+ LPFIDEK LL +K LT +E
Sbjct: 649 RDLMSNPDSEIIDFYPEEFEIDMNGKKMSWQGIPLLPFIDEKRLLDAVQKKYGLLTPDEK 708
Query: 611 FRNSVMLDLLYVHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVNASGGMNGYIW 665
RN+ L++ P + + + + +LY + + F + A G++G I+
Sbjct: 709 SRNTNKEAELFISPANKNFSKFS--EKLYKENENEVTFKY-----AKSGLSGKIF 756
>gi|19115067|ref|NP_594155.1| 5'-3' exoribonuclease Dhp1 [Schizosaccharomyces pombe 972h-]
gi|729332|sp|P40848.1|XRN2_SCHPO RecName: Full=5'-3' exoribonuclease 2; AltName: Full=Protein dhp1
gi|496393|dbj|BAA04601.1| Dhp1 protein [Schizosaccharomyces pombe]
gi|1177359|emb|CAA93235.1| 5'-3' exoribonuclease Dhp1 [Schizosaccharomyces pombe]
Length = 991
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 210/434 (48%), Positives = 285/434 (65%), Gaps = 16/434 (3%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPA +R L+ ++ I V+E + +G D+S PNPNG+E DNLYLDMNGI+
Sbjct: 1 MGVPALFRLLSRKFAKVITPVIEAPTEKLPDGTEIEPDLSLPNPNGVECDNLYLDMNGIV 60
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ +PAP + D++ ++F+Y D I +VRPR+LL++AIDGVAPRAKMNQQR+RRF
Sbjct: 61 HPCSHPEDRPAPETEDEMMVAVFEYTDRILAMVRPRQLLFIAIDGVAPRAKMNQQRSRRF 120
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAK-EKPETCDSNVITPGTQFMAVLSAALQYFI 179
R++++AA E E + +E ++ G + K ++ DSN ITPGT FM L+ +L+Y+I
Sbjct: 121 RSSREAALKEEELQAFIEEAKQQGIPIDENATKKKSWDSNCITPGTPFMDTLAKSLRYYI 180
Query: 180 QARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIM 239
+LN P W+ + ILSDA+VPGEGEHKIM +IR QR P +DPNT H +YGLDADLIM
Sbjct: 181 INKLNSDPCWRNVRFILSDASVPGEGEHKIMEFIRSQRVKPEYDPNTHHVVYGLDADLIM 240
Query: 240 LSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHG-KPGDNPADWNGVDDTPIH 298
L LATHE HF +LRE + F G E G K D+ ++ N V P+
Sbjct: 241 LGLATHEPHFRVLREDV--------FFQQGSTKKTKEERLGIKRLDDVSETNKV---PV- 288
Query: 299 KKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIRE 358
KK + +LN+ +LREYL+ EL +PN PFP + ER +DD+VF FFVGNDFLPH+P+L+IR+
Sbjct: 289 KKPFIWLNVSILREYLEVELYVPNLPFPFDLERAIDDWVFFIFFVGNDFLPHLPSLDIRD 348
Query: 359 GAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYEYN 418
GA+ L ++R MGGYLT G V L R E + +V ED IF++ QQ N
Sbjct: 349 GAVERLTEIWRASLPHMGGYLTLDGSVNLARAEVILSAVGNQEDDIFKRLK--QQEDRRN 406
Query: 419 EAMKLNARRESSEE 432
E + +RES++E
Sbjct: 407 ENYRRRQQRESNQE 420
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 108/201 (53%), Positives = 139/201 (69%), Gaps = 4/201 (1%)
Query: 441 ADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWF 500
DTV+L EPGY+ERYY KF IS P+E +K++ + V YV GLCWV YYYQ SW W+
Sbjct: 581 TDTVRLYEPGYRERYYEQKFHIS-PDEPEKIR-EAVKHYVHGLCWVLLYYYQGCPSWTWY 638
Query: 501 YPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSP 560
YPYHYAPFA+D KDL+ +++ F L +PF+P++QL+G LPAAS + LPEK + LMTD +S
Sbjct: 639 YPYHYAPFAADFKDLASIDVKFELNQPFKPYEQLLGVLPAASKNNLPEKLQTLMTDENSE 698
Query: 561 IYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLL 620
I FYP +F ID+NGK+F WQGV LPFIDE LL K+ LTEEE RN LL
Sbjct: 699 IIDFYPENFTIDLNGKKFEWQGVALLPFIDENRLLNAVSKIYPQLTEEESKRNEDGSTLL 758
Query: 621 YVHPQHPLYQQITLYCQLYHQ 641
++ HP++ + L QLY +
Sbjct: 759 FISEHHPMFSE--LVKQLYSK 777
>gi|156839637|ref|XP_001643507.1| hypothetical protein Kpol_473p8 [Vanderwaltozyma polyspora DSM
70294]
gi|156114121|gb|EDO15649.1| hypothetical protein Kpol_473p8 [Vanderwaltozyma polyspora DSM
70294]
Length = 1057
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 203/450 (45%), Positives = 285/450 (63%), Gaps = 19/450 (4%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP+F+RWL+ +YP I V+E+ PQV +GV P+D S PN NG E DNLYLDMNGI+
Sbjct: 1 MGVPSFFRWLSRKYPKIISPVLEDAPQV-VDGVQLPIDYSAPNQNG-ELDNLYLDMNGIV 58
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ KP P + D++ ++F+Y + + + RPRK+L +A+DGVAPRAKMNQQR RRF
Sbjct: 59 HPCSHPENKPPPENEDEMLLAVFEYTNRVLNMARPRKVLMIAVDGVAPRAKMNQQRARRF 118
Query: 121 RAAKDAA-EAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFI 179
R+A+DA + EA EE +R++ E + + +T DSN ITPGT FM L+AAL+Y+
Sbjct: 119 RSARDAKIQDEAREEIMREKEEIGEHIDESVRNKKTWDSNAITPGTPFMDKLAAALRYWT 178
Query: 180 QARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIM 239
+L PGW+ ++I+SDA VPGEGEHKIM++IR QR P ++PNT HC+YGLDADLI
Sbjct: 179 AFKLATDPGWKNLQIIISDATVPGEGEHKIMNFIRSQRADPEYNPNTTHCIYGLDADLIF 238
Query: 240 LSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIHK 299
L LATHE HF ILRE + G K ++ E + +
Sbjct: 239 LGLATHEPHFKILREDVFAQGNNRKRHNFKDNINMTEEEK-----------QIIMKEDSQ 287
Query: 300 KKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREG 359
K + +L+I VLREYL EL + PFP + ER +DD+VF+CFF GNDFLPH+P+L++RE
Sbjct: 288 KPFLWLHISVLREYLSAELWVQRLPFPFDLERAIDDWVFMCFFCGNDFLPHLPSLDVREN 347
Query: 360 AINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYEYNE 419
+I++L+ +++ + Y+T GE+ L VEK + + E IF +TR Q E
Sbjct: 348 SIDILLDIWKVVLPNLKDYMTCDGELNLASVEKLLYQLGSREGDIF--KTRHIQEIRKQE 405
Query: 420 AM---KLNARRESSEELLQAPVAVADTVKL 446
A+ KL ++ S+ + P + ++L
Sbjct: 406 ALQRRKLGNQKNLSQGQDRHPTQFNEQLQL 435
Score = 197 bits (501), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 104/257 (40%), Positives = 153/257 (59%), Gaps = 11/257 (4%)
Query: 438 VAVADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSW 497
+ ++V+L EPGY RYY KF I+ E I + + VV Y+EG+ WV YYYQ SW
Sbjct: 600 IDTDESVRLYEPGYHSRYYTSKFNIA-EENITPLSRKVVRSYIEGVSWVLLYYYQGCASW 658
Query: 498 QWFYPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDP 557
W+YPYHYAPFASD +++D+EI F LGEPF P++QLM LPAAS + LP+ +++LM +P
Sbjct: 659 NWYYPYHYAPFASDFTNIADMEINFELGEPFLPYEQLMSVLPAASGNMLPKVFQSLMRNP 718
Query: 558 SSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVML 617
S I FYP +F IDMNGK+ +WQG+ LPFIDE+ LL+ + LT+ E RN
Sbjct: 719 DSEIVDFYPVEFLIDMNGKKMSWQGIALLPFIDEERLLKSVRSQYKVLTDSEKSRNVRNQ 778
Query: 618 DLLYVHPQHPLYQQIT--LYCQLYHQLPPQDRFAWEIDVNASGGMNGYIWLCERN-GLRS 674
+++ + ++ Y + LY + + F+ + + G++GY+ + L S
Sbjct: 779 EIVLISNKNVNYDKFVKELYTENLENPNFEQYFS-----HFNSGLSGYVGKDKEGFDLNS 833
Query: 675 IIPSPVKG--LPDIERN 689
I P++ LP + N
Sbjct: 834 KILCPIQAGSLPTLSTN 850
>gi|255720663|ref|XP_002545266.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240135755|gb|EER35308.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 981
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 198/407 (48%), Positives = 268/407 (65%), Gaps = 23/407 (5%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGE-GVARPVDVSKPNPNGMEFDNLYLDMNGI 59
MGVPA +RWL+ +YP I V+EE+ D E G AR D PNPNG E DNLYLDMNGI
Sbjct: 1 MGVPALFRWLSRKYPKIISPVIEEE---DHEIGGARYED---PNPNG-EIDNLYLDMNGI 53
Query: 60 IHPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRR 119
+HPC HP+ K AP + D++F IF Y D + ++ RPRK+L +A+DGVAPRAKMNQQR RR
Sbjct: 54 VHPCSHPEHKKAPETEDEMFLDIFKYTDRVLMMARPRKVLMIAVDGVAPRAKMNQQRARR 113
Query: 120 FRAAKDAAEAEAEEERLRKEFEEAGKLLS-AKEKPETCDSNVITPGTQFMAVLSAALQYF 178
FRAA+DA + E KE E G+++ A + + DSN ITPGT FM L+ AL+Y+
Sbjct: 114 FRAAQDAKLKSHQLEIEVKEREMRGEVIDDAIKGKKQWDSNAITPGTPFMDRLAEALRYW 173
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
+ +L PGW +VI+SDA VPGEGEHK+M++IR QR+ P +DPNT+HC+YGLDADLI
Sbjct: 174 VAYKLANDPGWANLQVIISDATVPGEGEHKLMNFIRSQRSDPQYDPNTKHCIYGLDADLI 233
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
L LATHE HF +LRE + Q++K + Q+ ++ V
Sbjct: 234 FLGLATHEPHFRVLREDV-FAKQEKKFTIRDQIAEATSDA-------------VKTKTED 279
Query: 299 KKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIRE 358
+K + +L++ VLREYLQ EL P PFP ER +DD+VFLCFF GNDFLPH+P+L++R+
Sbjct: 280 RKPFLWLHVSVLREYLQVELYAPRMPFPFQLERAIDDWVFLCFFAGNDFLPHLPSLDVRD 339
Query: 359 GAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIF 405
I+ L+ ++R + Y+T G++ L+ VE + ++A ED+IF
Sbjct: 340 NGIDTLVQCWKRSLGRLKDYVTCDGKLNLESVEVLMSNLATKEDEIF 386
Score = 206 bits (525), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 121/331 (36%), Positives = 178/331 (53%), Gaps = 33/331 (9%)
Query: 327 INFERIVDDFVFLCFFVGNDFLP-----HMPTLEIREGAINLLMHVYRREFTAMGGYLTD 381
I+ E+ + D G D P +MP ++ + + ++ + +T
Sbjct: 407 IDQEKALKDIYLPTVSKGKDKAPLTADTNMPLMDTKGNIVEGYANLTNSDIVQNQAIITK 466
Query: 382 AGEVLLD---RVEKFIQS----VAVYEDQIFQKR-------------TRIQQAYEYNEAM 421
A + +++K I S V+ +DQI ++ + I+ +E
Sbjct: 467 ANMANSEAAAQLKKLIDSKKTQVSTVQDQIDSEQMTPSDSSSMPTSESEIETPTTVDEDS 526
Query: 422 KLNARRESSEELLQAPVAVADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVE 481
K ++ EE + D +KL EPGY +RYY KF + EEI+K++++VV YVE
Sbjct: 527 KKRKHKDVDEE-----IGTPDDIKLYEPGYHKRYYEIKFHCKSDEEIEKMRREVVAHYVE 581
Query: 482 GLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDL---EITFFLGEPFRPFDQLMGTL 538
G+ WV YYYQ SW+W++PYHYAPFA+D +L +L I F LG+PFRPF+QLM L
Sbjct: 582 GIAWVALYYYQGCPSWKWYFPYHYAPFAADFTNLQELFPNGIKFELGQPFRPFEQLMSVL 641
Query: 539 PAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQT 598
PAAS ALP+ +R LM++P S I FYP +F+IDMNG + +WQG+ LPFIDEK LL
Sbjct: 642 PAASGHALPKVFRELMSNPDSEIIDFYPEEFEIDMNGAKMSWQGIPLLPFIDEKRLLDAV 701
Query: 599 KKLEVFLTEEELFRNSVMLDLLYVHPQHPLY 629
+K LT EE RN+ L++ P + Y
Sbjct: 702 QKQYELLTPEEKDRNTNKKAELFISPANKNY 732
>gi|342182115|emb|CCC91594.1| putative exoribonuclease 1 [Trypanosoma congolense IL3000]
Length = 1296
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 242/638 (37%), Positives = 355/638 (55%), Gaps = 72/638 (11%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP F+RW+A+RYP+ I + P VD NLYLD+NGII
Sbjct: 1 MGVPKFFRWIAERYPMVITPFRDFPPPVD---------------------NLYLDVNGII 39
Query: 61 HPCFHPDGKPAPT---SYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRT 117
H C HP+ + + ++ +++F Y++ +F ++PRK +LA+DGVAPRAKMNQQR
Sbjct: 40 HNCSHPNDANSSAKVLTEKEMIEAMFVYLEKLFHAIQPRKCFFLAVDGVAPRAKMNQQRQ 99
Query: 118 RRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQY 177
RR+R+ + A + E +LL + DSN ITPGT+FM +S L+Y
Sbjct: 100 RRYRSGYEMMVAR------ERAAAEGMELL----EENVFDSNCITPGTEFMVNVSEHLKY 149
Query: 178 FIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADL 237
FI +++ P WQ KV+ S + PGEGEHKI+ YIR ++ ++PN H LYGLDADL
Sbjct: 150 FIMMKVSSDPAWQSCKVVYSGHDHPGEGEHKIVDYIRRRKMQEDYNPNETHSLYGLDADL 209
Query: 238 IMLSLATHEIHFSILREVITL-PGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTP 296
I+L+LATHE H +LREV++ P Q + A+ + D + NG+
Sbjct: 210 ILLALATHEPHLVLLREVVSFGPSQGSR-----------ADREQREND---EANGIVADK 255
Query: 297 IHKKKYQFL--NIWVLREYLQYELDI---PNPPFPINFERIVDDFVFLCFFVGNDFLPHM 351
+ K +F+ ++ +LR YL E+ P + E ++DDFVF+C F+GNDFLP +
Sbjct: 256 TYNKPDEFVLFHVNILRNYLDLEVRYVLGGKLPAGYDLEHVIDDFVFMCIFIGNDFLPSI 315
Query: 352 PTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRI 411
PTL IR+G++ ++ +Y + G LT+ G + D V+ ++Q +A E + R
Sbjct: 316 PTLGIRDGSVVKMVEIYATKIVKNGRRLTEDGSINWDAVDTWLQELAKDELPTIKSRALQ 375
Query: 412 QQAYEYNEAMKLNARRESSEELLQAPVAVADTVK-LGEPGYKERYYADKFEIS---NPEE 467
++AY+ A ++N E AP +TV+ L E YKE+YY +K NP+
Sbjct: 376 ERAYQSRMA-RMNGGYE-------APNISTETVETLVE--YKEKYYREKHGFGDGWNPQG 425
Query: 468 IDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDL--EITFFLG 525
+ K + L YVEG+ WV YYYQ SW+WFYP+HYAP ASDL DL+ + + F G
Sbjct: 426 ENMAK--LKLHYVEGIAWVLEYYYQGPPSWKWFYPHHYAPMASDLVDLAAVASRVRFDPG 483
Query: 526 EPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVK 585
EPF P QL+ LP S +P Y L+ SP+ K++P QID G R W+GVV
Sbjct: 484 EPFLPHQQLLAVLPPMSYRLVPRAYWPLLRSKGSPLAKYFPEKLQIDREGARAEWEGVVL 543
Query: 586 LPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVH 623
+PFIDE++LL + ++ +T E+ NS +L+ +
Sbjct: 544 IPFIDERVLLAAYESVQSKVTPEDRKNNSPGPPILFTY 581
>gi|410078313|ref|XP_003956738.1| hypothetical protein KAFR_0C06110 [Kazachstania africana CBS 2517]
gi|372463322|emb|CCF57603.1| hypothetical protein KAFR_0C06110 [Kazachstania africana CBS 2517]
Length = 1039
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 200/422 (47%), Positives = 275/422 (65%), Gaps = 23/422 (5%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP+F+RWL+ +YP I V+EE PQV +GVA P+D + PNPNG E DNLYLDMNGI+
Sbjct: 1 MGVPSFFRWLSRKYPKIICPVLEEYPQV-VDGVALPIDYASPNPNG-ELDNLYLDMNGIV 58
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ KP P + D++ ++F+Y + + + RPRK+L +A+DGVAPRAKMNQQR RRF
Sbjct: 59 HPCSHPENKPPPETEDEMLLAVFEYTNRVLNMARPRKVLLMAVDGVAPRAKMNQQRARRF 118
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLS-AKEKPETCDSNVITPGTQFMAVLSAALQYFI 179
R+A+DA A E +E E G+++ A +K +T DSN ITPGT FM L+AAL+Y+
Sbjct: 119 RSARDAQIANEAREEELRERENYGEIIDDALKKKKTWDSNAITPGTPFMDKLAAALRYWT 178
Query: 180 QARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIM 239
+L PGW+ +VI+SDA VPGEGEHKIM++IR QR P ++PNT HC+YGLDADLI
Sbjct: 179 AFKLATDPGWKNLQVIISDATVPGEGEHKIMNFIRSQRADPEYNPNTTHCIYGLDADLIF 238
Query: 240 LSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAE-CHGKPGDNPADWNGVDDTPIH 298
L LATHE HF ILRE + +++ + E K + P W
Sbjct: 239 LGLATHEPHFKILREDVFAQDNRKRTTFSDNMSEEEKELIMKKDAEKPFLW--------- 289
Query: 299 KKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIRE 358
L+I VLREYL EL IP F + ER +DD+VF+CFF GNDFLPH+P+L++RE
Sbjct: 290 ------LHISVLREYLAAELWIPRLSFNFDLERAIDDWVFMCFFCGNDFLPHLPSLDVRE 343
Query: 359 GAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKR----TRIQQA 414
+I++L+ +++ ++ Y+T G + L+ VE ++ + E IF+ R R Q+A
Sbjct: 344 NSIDILLDIWKVILPSLKTYMTCDGFLNLESVEILLKQLGDREPDIFKTRYIQEVRKQEA 403
Query: 415 YE 416
+E
Sbjct: 404 FE 405
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 113/264 (42%), Positives = 161/264 (60%), Gaps = 7/264 (2%)
Query: 429 SSEELLQAPVAVADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCR 488
SS ++ + D VKL E GY+ERYY +KF IS +EI+ V++D+V YVEG+ WV R
Sbjct: 592 SSGDITSGVIDTDDNVKLYESGYRERYYTEKFHISK-DEIEIVRRDMVRSYVEGVSWVLR 650
Query: 489 YYYQDVCSWQWFYPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPE 548
YYYQ SW W+YP+HYAPFASD D+ D+++ F LGEPF P++QLM LPAAS LP
Sbjct: 651 YYYQGCASWNWYYPFHYAPFASDFFDIKDIKVEFDLGEPFLPYEQLMSVLPAASGHTLPP 710
Query: 549 KYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEE 608
+R LM++ SPI FYPP+F IDMNGK+ +WQG+ LPFIDEK LL + L++
Sbjct: 711 IFRPLMSEADSPIIDFYPPEFPIDMNGKKMSWQGIALLPFIDEKRLLEVVRAQYPKLSDA 770
Query: 609 ELFRNSVMLDLLYVHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVNASGGMNGYIWLCE 668
E RN +L + ++ Y++ + +LY D F + + G++G + + E
Sbjct: 771 ERSRNVRKEAILLISNKNVNYEKFS--KKLYQSEDLADDFEIKFR-HFKSGLSGIVSIDE 827
Query: 669 RN-GLRSIIPSPVK--GLPDIERN 689
L S + P++ LP++ N
Sbjct: 828 EGFKLNSKLLCPLESTSLPELSTN 851
>gi|406603016|emb|CCH45428.1| 5'-3' exoribonuclease 2 [Wickerhamomyces ciferrii]
Length = 940
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 195/406 (48%), Positives = 272/406 (66%), Gaps = 16/406 (3%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPAFYRWL+ +YP I +EED V +GV P S PNPNG E DNLYLDMNGI+
Sbjct: 1 MGVPAFYRWLSRKYPKIISPTLEEDATV-VDGVTVPPSYSNPNPNG-ELDNLYLDMNGIV 58
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ +P P + D++ ++F+Y D + + RPRK+L +A+DGVAPRAKMNQQR RRF
Sbjct: 59 HPCSHPENRPPPETEDEMLLAVFEYTDRVLNMARPRKVLMIAVDGVAPRAKMNQQRARRF 118
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEK-PETCDSNVITPGTQFMAVLSAALQYFI 179
R+A+DA + E +RL+ E G+++ K +T DSN ITPGT FM L+ AL+Y+
Sbjct: 119 RSARDAKIQDEERQRLQDLREGYGEVIDEAVKVKKTWDSNAITPGTPFMDKLALALRYWT 178
Query: 180 QARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIM 239
+L+ PGW+ +VI+SDA VPGEGEHKIM+++R QR+ ++PNT+H +YGLDADLI
Sbjct: 179 AYKLSSDPGWKDLQVIISDATVPGEGEHKIMNFVRSQRSDIEYNPNTKHAIYGLDADLIF 238
Query: 240 LSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIHK 299
L LATHE HF +LRE + + K + +L+ E H K + + K
Sbjct: 239 LGLATHEPHFRVLREDVF--ARDNKMMSVQEKMNLSEE-HRK----------LIEEKESK 285
Query: 300 KKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREG 359
K + +LNI VLREYL+ EL+IP PF + ER +DD+VF+CFF GNDFLPH+P+L++R+
Sbjct: 286 KPFLWLNINVLREYLEIELNIPRLPFKFDLERAIDDWVFMCFFCGNDFLPHLPSLDVRDN 345
Query: 360 AINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIF 405
+I+LL+ ++++ M Y+T G + L+ VE + ++A E IF
Sbjct: 346 SIDLLVSIWKQVLPKMKSYITCDGILNLENVEVLLSNLAPREADIF 391
Score = 208 bits (530), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 107/242 (44%), Positives = 149/242 (61%), Gaps = 7/242 (2%)
Query: 441 ADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWF 500
D V+L EPGY +RYY KF IS+ EE++ K+VV Y+EG+ WV YYYQ SW W+
Sbjct: 555 GDPVRLFEPGYHDRYYRIKFHISD-EEVEATSKEVVKHYIEGISWVLLYYYQGCPSWNWY 613
Query: 501 YPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSP 560
YPYHYAPFA D ++ DL+I F G+PF P++QLM LPAAS LPE +R LM+D SP
Sbjct: 614 YPYHYAPFAQDFTNIKDLDIKFTQGKPFLPYEQLMSVLPAASGHNLPEIFRPLMSDADSP 673
Query: 561 IYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLL 620
I FYP DF IDMNGK+ +WQG+V LPFIDEK LL + LT+ E RN D++
Sbjct: 674 IIDFYPEDFPIDMNGKKMSWQGIVLLPFIDEKRLLEVVRDQYPKLTDAEKGRNVRKEDVV 733
Query: 621 YVHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVNASGGMNGYIWLCERNGLRSIIPSPV 680
++ ++ +++ + +LY + + + G+ G + E+ SI+P P+
Sbjct: 734 FLSKENKRFKE---FKKLYSDSKKVEAIDFHFN---KTGLCGKVLSNEKFQFDSILPCPI 787
Query: 681 KG 682
+G
Sbjct: 788 EG 789
>gi|397607914|gb|EJK59848.1| hypothetical protein THAOC_19883 [Thalassiosira oceanica]
Length = 773
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 243/678 (35%), Positives = 343/678 (50%), Gaps = 131/678 (19%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MG+P +RWL D+YP + + G + P DN YLDMNGII
Sbjct: 60 MGIPKMFRWLTDQYPNILNRRL-------GSATSIP-----------HVDNFYLDMNGII 101
Query: 61 HPCFHPDGKPAPTSYDD--VFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
HPC H + + T D+ +FK IF Y+D ++ +V+PRK+LYLA+DGVAPRAKMNQQR+R
Sbjct: 102 HPCTHGNNEDEITILDETEMFKKIFGYVDRLYKIVQPRKVLYLAVDGVAPRAKMNQQRSR 161
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RFR++K+A E+L L ++ DSN ITPGT FM L A++ +
Sbjct: 162 RFRSSKEA-------EKLAATILARDGSLPERD---AFDSNCITPGTDFMLKLGLAMRKW 211
Query: 179 IQARLNQIPGWQ-FTKVILSDANVPGEGEHKIMSYIRLQRNL---------PGFDPNTRH 228
I+ + P W+ V++S +VPGEGEHK+M +IR + L P + P+ H
Sbjct: 212 IEYKQQTDPAWKNGCDVVVSGPDVPGEGEHKVMDFIRDTKALYDPDDLEKSPHWQPSLTH 271
Query: 229 CLYGLDADLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPAD 288
LYGLDADLIML LATHE HF +LRE +++ + G+ H H K D
Sbjct: 272 VLYGLDADLIMLGLATHEPHFLLLREKMSV-------VMAGRGRH----KHRKKKDM--- 317
Query: 289 WNGVDDTPIHKKKYQFLNIWVLREY--LQYELDIPNPPFPINFE--RIVDDFVFLCFFVG 344
+ + L + LRE +Q+ + + ++ R++DDF+F+C FVG
Sbjct: 318 ------LEYTRNDFDLLELSSLREMFKIQFRKFADSDRLKVQYDVCRVIDDFIFMCMFVG 371
Query: 345 NDFLPHMPTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQI 404
NDFLPH+P LEI GA++L+++ Y GGYLTD G++ R+E+F ++AV+E++
Sbjct: 372 NDFLPHVPHLEIDNGALSLMLNNYIDLLPEWGGYLTDKGKIHPARLEQFFYNLAVFEEEH 431
Query: 405 FQKR------------TRIQQ------------------AYEYNEAMKLNARR----ESS 430
F++R T +Q A E N+ + + R
Sbjct: 432 FRRRAYEENEPGWGLGTENEQDDEDFYGEWYGGTPTPLVAKEANDGLVVETNRIDIDGGG 491
Query: 431 EELLQAPVAVADTV--------------KLGEPGYKERYYADKFEIS----NPEEIDKVK 472
E QA DT + Y+E YY K IS N E + +
Sbjct: 492 ESESQAETTAPDTAPKTKVEKKFKKLHPRDASRSYREFYYESKLGISPLVTNRAEAQRDR 551
Query: 473 KDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDL-------------- 518
+ + Y+EGL W YY+ CSW WF+P+ YAP ++D+ +LS+
Sbjct: 552 RAIARDYLEGLHWNLNYYHSGCCSWSWFFPHLYAPLSTDMVNLSEFYGDEDISPTDNDGF 611
Query: 519 -EITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKR 577
E F EPF P QL+ LP S+S LP LMT+PSSP+ FYP DF D NGKR
Sbjct: 612 REFKFGNTEPFPPLAQLLSVLPPQSASLLPPSLGELMTEPSSPLAPFYPNDFDSDPNGKR 671
Query: 578 FAWQGVVKLPFIDEKLLL 595
W+ +VK+PFID LL
Sbjct: 672 QPWEAIVKIPFIDGDQLL 689
>gi|448107650|ref|XP_004205418.1| Piso0_003664 [Millerozyma farinosa CBS 7064]
gi|448110652|ref|XP_004201682.1| Piso0_003664 [Millerozyma farinosa CBS 7064]
gi|359382473|emb|CCE81310.1| Piso0_003664 [Millerozyma farinosa CBS 7064]
gi|359383238|emb|CCE80545.1| Piso0_003664 [Millerozyma farinosa CBS 7064]
Length = 993
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 197/424 (46%), Positives = 277/424 (65%), Gaps = 21/424 (4%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGE-GVARPVDVSKPNPNGMEFDNLYLDMNGI 59
MGVPA +RWL+ +YP I V+E+ ++D E G +R D PNPNG E DNLYLDMNGI
Sbjct: 1 MGVPALFRWLSRKYPKIISPVIED--ELDEEYGGSRYTD---PNPNG-EIDNLYLDMNGI 54
Query: 60 IHPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRR 119
+HPC HP+ KP P + D++F +F Y D + ++ RPRK+L +A+DGVAPRAKMNQQR+RR
Sbjct: 55 VHPCSHPEHKPPPETEDEMFLDVFKYTDRVLMMARPRKVLVIAVDGVAPRAKMNQQRSRR 114
Query: 120 FRAAKDAAEAEAEEERLRKEFEEAGKLL-SAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
FR+A+DA A E+ER E E G+++ A + ++ DSN ITPGT FM L+ AL+Y+
Sbjct: 115 FRSAQDAKIAHEEKERQINERELRGEMIDEAIKGKKSWDSNAITPGTPFMDRLALALRYW 174
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
+ +L+ PGW +VI+SDA VPGEGEHK+MS+IR QR+ P ++PNT HC+YGLDADLI
Sbjct: 175 VAYKLSTEPGWANLQVIISDATVPGEGEHKLMSFIRSQRSDPEYNPNTSHCIYGLDADLI 234
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
L LATHE HF +LRE + Q + V Q+ D
Sbjct: 235 FLGLATHEPHFRVLREDV-FANQSRQLRVSDQLSM------------SEDQKDALKKKEE 281
Query: 299 KKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIRE 358
+K + +L++ VLREYL+ EL P FP + ER +DD+VF+CFF GNDFLPH+P+L++R+
Sbjct: 282 RKPFLWLHLNVLREYLEIELYNPYISFPFDLERAIDDWVFICFFAGNDFLPHLPSLDVRD 341
Query: 359 GAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYEYN 418
I+ L+ ++R + Y+T G + L+ VEK ++ +A ED+IF+++ + E N
Sbjct: 342 NGIDNLVRCWKRILPKLSDYITCDGNLNLESVEKLLEGLASKEDEIFRRKHEQELRQEEN 401
Query: 419 EAMK 422
E +
Sbjct: 402 ERRR 405
Score = 228 bits (582), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 108/213 (50%), Positives = 148/213 (69%), Gaps = 6/213 (2%)
Query: 442 DTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFY 501
D +++ EPGY+ERYY KF I++ E+IDKV+KD+V Y+EG+ WV YYYQ SWQW+Y
Sbjct: 538 DKIRMWEPGYRERYYKSKFHITSEEDIDKVRKDMVKHYLEGISWVLLYYYQGCPSWQWYY 597
Query: 502 PYHYAPFASDLKDLSDL----EITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDP 557
PYHYAPFA+D K++ ++ ITF LG+PFRP++QLM LPAAS LPE +R LM+DP
Sbjct: 598 PYHYAPFAADFKNIREIVGEEGITFKLGQPFRPYEQLMSVLPAASGHNLPEVFRKLMSDP 657
Query: 558 SSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVML 617
S I FYP +F+IDMNGK+ +WQG+ LPFIDEK LL +K LTE E RN++
Sbjct: 658 ESEIIDFYPEEFEIDMNGKKMSWQGIALLPFIDEKRLLEAVQKKYELLTEAEKERNTLKD 717
Query: 618 DLLYVHPQHPLYQQITLYCQLYHQLPPQDRFAW 650
++L + QH +Y+ T +LY + + F++
Sbjct: 718 EVLIISKQHKMYE--TFCKELYEKSQNEVEFSF 748
>gi|162606084|ref|XP_001713557.1| very similar to mouse Dhm1 and Dhm2 [Guillardia theta]
gi|13794477|gb|AAK39852.1|AF165818_60 very similar to mouse Dhm1 and Dhm2 [Guillardia theta]
Length = 542
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 243/629 (38%), Positives = 324/629 (51%), Gaps = 99/629 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP F+RWL++RYPL + E+ EFD YLDMNGII
Sbjct: 1 MGVPKFFRWLSERYPLINQKIFEKS----------------------EFDCFYLDMNGII 38
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
H CF + D +F+ IFDY ++++ ++ P+KLLYLAIDGVAPRAKMNQQR+RRF
Sbjct: 39 HTCFQKIASEQNFNKDILFQKIFDYTEYLYTIIHPKKLLYLAIDGVAPRAKMNQQRSRRF 98
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQ 180
RA KD + + R R T DSN ITPGT FMA LS A + +++
Sbjct: 99 RAIKDNEKKSDFDHRNRLNL--------------TLDSNCITPGTSFMAELSYAFKIWLE 144
Query: 181 ARLNQIPGWQF-TKVILSDANVPGEGEHKIMSYIRLQRNLPGF-DPNTRHCLYGLDADLI 238
++ WQ +I S A VPGEGEHKIM++IR +NL D HCLYGLDADLI
Sbjct: 145 KKIKTDIEWQTGCDIIFSGAEVPGEGEHKIMNFIRKLKNLKNNPDLILSHCLYGLDADLI 204
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
ML L +HE +F++LRE + G + G+ E P D+
Sbjct: 205 MLGLVSHEKNFTLLREKLAWKGTSNV-----KEGY-NYEFEKSPSDD------------- 245
Query: 299 KKKYQFLNIWVLREYLQYEL---DIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLE 355
+ L I +LRE L E + + + N ERIVDDFVF+C +GNDFLP +P L+
Sbjct: 246 ---FHLLEISLLREMLYLEFRPREFLDQDY--NMERIVDDFVFMCMLIGNDFLPGIPHLD 300
Query: 356 IREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAY 415
I G +NLL+ Y+ + GYLT+ ++ + R E F + ++V
Sbjct: 301 IGYGGLNLLVRSYKEIQKHIHGYLTNKSKIHVGRAELFFEKLSV---------------- 344
Query: 416 EYNEAMKLNARRESSEELLQAPVAVADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDV 475
SEEL L YK YY K S +++ D+
Sbjct: 345 -------------ESEELYFLNKGNDIENNLCSNDYKMEYYVKKLNCSVSNNKERI-NDL 390
Query: 476 VLKYVEGLCWVCRYYYQDVC-SWQWFYPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQL 534
+ Y+EGL W C YYY C SW WFYP +YAP ASDLK L ++I F G+PF P QL
Sbjct: 391 IQTYIEGLHW-CLYYYHKGCPSWNWFYPEYYAPLASDLKSLKKIKIKFKKGKPFEPLVQL 449
Query: 535 MGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEK-- 592
+ LP S + LP + LM SP+ +YP +++IDMNGK+ W+GVV LPFI+E
Sbjct: 450 LAVLPPNSRNLLPISFSRLMVKKDSPVIDYYPLEYKIDMNGKKNLWEGVVILPFINESNL 509
Query: 593 LLLRQTKKLEVFLTEEELFRNSVMLDLLY 621
+L K L +EE RNS D+ +
Sbjct: 510 VLTLDNMKTRSTLNDEENTRNSFGKDVTF 538
>gi|320169726|gb|EFW46625.1| Dhm2 protein [Capsaspora owczarzaki ATCC 30864]
Length = 1615
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 222/588 (37%), Positives = 300/588 (51%), Gaps = 68/588 (11%)
Query: 56 MNGIIHPCFHP-DGKPA-PTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMN 113
MNGIIH C HP D P+ + D +F IF YIDH+F ++RP++ ++A+DGVAPRAKMN
Sbjct: 1 MNGIIHNCSHPNDVDPSFRITEDKIFAEIFAYIDHLFNIIRPQRTFFMAVDGVAPRAKMN 60
Query: 114 QQRTRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSA 173
QQR RRFR+AK+ AE R K E E DSN ITPGT FM+ LS
Sbjct: 61 QQRARRFRSAKENESKLAEARRSGKPIPET----------EPFDSNCITPGTAFMSKLSV 110
Query: 174 ALQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGL 233
L+YFI ++ W+ +VILS +PGEGEHKIM Y+R Q++LPG+DPNTRHCLYGL
Sbjct: 111 QLKYFISRKITTDRAWRNVEVILSGHEIPGEGEHKIMEYVRTQKSLPGYDPNTRHCLYGL 170
Query: 234 DADLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVD 293
DADL++L LA+HE F +LRE + G GK G G D
Sbjct: 171 DADLMILGLASHEPQFCLLREEVKFGG-------------------GKKGPQSKKTGGAD 211
Query: 294 DTPIHKKKYQFLNIWVLREYLQYELDIPNPPFPI-------------------------N 328
+ L++ +LREYL+ E P F + N
Sbjct: 212 AI-----TFFLLHLSLLREYLEVEF---RPAFDMAQAEYKAALAALPAGTPAPPAPLVFN 263
Query: 329 FERIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLD 388
E ++DD+V + + +GNDF+PH+P L I GA L VY YL G + L
Sbjct: 264 LESVIDDWVLMGYLIGNDFIPHLPHLHIDTGAWEYLYKVYGEIVPKQQSYLNINGRIHLP 323
Query: 389 RVEKFIQSVAVYEDQIFQKRTRIQQAYEYNEAMKLNARRESSEELLQAPVAVADTVKLGE 448
E F++ ++ ++ IFQ+ + Y + + ++ R +
Sbjct: 324 TFELFMERLSRFDFDIFQE-SNADLKYLHGKTRGGHSGRGGRGGHSRRGGNRGGESGPSG 382
Query: 449 PGYKERYYADKFEISNPEEIDKV---KKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHY 505
E D +E D + + V ++ L + W W+YP+HY
Sbjct: 383 DSRPESRAEDGLGFFGAQEADDTLVAEMNAVEDRLKRLGINTGAEFFADTPWGWYYPFHY 442
Query: 506 APFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFY 565
+P+ASDL+ S L I F LG+PFRPF QL+G LPAAS LP Y LMT P SP+ Y
Sbjct: 443 SPYASDLRGFSHLHIEFELGKPFRPFQQLLGVLPAASKHLLPPVYHELMTSPMSPVIDLY 502
Query: 566 PPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRN 613
P DF+ D+NGK+ W+ V+ +PFIDEK LL K + L EE RN
Sbjct: 503 PLDFESDLNGKKNEWEAVILIPFIDEKRLLAAMKPFDARLNAEERARN 550
>gi|395833059|ref|XP_003789564.1| PREDICTED: 5'-3' exoribonuclease 1 [Otolemur garnettii]
Length = 1666
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 219/600 (36%), Positives = 321/600 (53%), Gaps = 108/600 (18%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP FYRW+++RYP + +VV+E Q+ EFDNLYLDMNGII
Sbjct: 1 MGVPKFYRWISERYPC-LSEVVKEH-QIP------------------EFDNLYLDMNGII 40
Query: 61 HPCFHPDGKPAP--TSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C HP+ S D +F IF Y++ +F +++PRK+ ++A+DGVAPRAKMNQQR R
Sbjct: 41 HQCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RFR+AK+A E++++K E+ G+ L + + DSN ITPGT+FMA L L+YF
Sbjct: 101 RFRSAKEA------EDKIKKAIEK-GETLPTEAR---FDSNCITPGTEFMARLHEHLKYF 150
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
+ +++ WQ + S PGEGEHKIM +IR ++ P DPNTRHCLYGLDADLI
Sbjct: 151 VNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLI 210
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
ML L +HE HFS+LRE + G++ + VC ++T H
Sbjct: 211 MLGLTSHEAHFSLLREEVRFGGKKAQ-RVCAP----------------------EETTFH 247
Query: 299 KKKYQFLNIWVLREYLQYELDI--PNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEI 356
L++ ++REY+ YE + F + ERI+DD++ + F VGNDF+PH+P L I
Sbjct: 248 -----LLHLSLMREYIDYEFSVLKEKITFKYDIERIIDDWILMGFLVGNDFIPHLPHLHI 302
Query: 357 REGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQK--------R 408
A+ LL Y +GGY+ ++G + L R EK++ ++ ++ + F +
Sbjct: 303 NHDALPLLYGTYITILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSEVFVDLKWFE 362
Query: 409 TRIQQAYE----------------------------YNEAMKLNARRESSEELLQAPVAV 440
+++ Y + K +S++ L+
Sbjct: 363 SKVGNKYLNEAAGVAAEEAKNYKEKKKSKGPENSICWAALEKNKGEVVTSKDNLEDETED 422
Query: 441 ADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLK----YVEGLCWVCRYYYQDVCS 496
D + YK YY K +D V D + YV+ + W+ YYY V S
Sbjct: 423 DDLFETEFRQYKRTYYMTKM------GVDVVSDDFLANQAACYVQAIQWILHYYYHGVQS 476
Query: 497 WQWFYPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTD 556
W W+YPYHYAPF SD++++S L+I F LG+PF+PF+QL+ LPAAS + LP Y+ + +
Sbjct: 477 WSWYYPYHYAPFLSDIRNISTLKIHFELGKPFKPFEQLLAVLPAASKNLLPTCYQKRLLE 536
>gi|340057226|emb|CCC51568.1| putative exoribonuclease 2 [Trypanosoma vivax Y486]
Length = 783
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 237/656 (36%), Positives = 342/656 (52%), Gaps = 89/656 (13%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MG+ F+ WL Y I DV E Q +G A P + + +FDNLYLDMNG++
Sbjct: 1 MGIAGFFLWLRRWYGPCIEDVPESVVQALLKGEAPP----EADMGHWKFDNLYLDMNGLV 56
Query: 61 HPCFHPDGK-PAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRR 119
HPC H P P S +++F IF +D +F +V+PRK L + +DGVAP++KMNQQR+RR
Sbjct: 57 HPCCHDTAPLPEPKSEEEMFDRIFSQLDLVFRVVQPRKCLVMCVDGVAPQSKMNQQRSRR 116
Query: 120 FRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFI 179
FRAA++ AE++ + E E G L D NVITP T FM L A+++FI
Sbjct: 117 FRAAEERAESDQLAMQCADELVEMG--LPRPSPKSRWDHNVITPSTPFMERLGVAVEWFI 174
Query: 180 QARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIM 239
++N+ P WQ V+ SD++VPGEGEHKIM +IR R+ PG++P T H +YG+DADLI
Sbjct: 175 GKKVNEDPAWQKVAVVFSDSHVPGEGEHKIMQFIRGLRSQPGYNPQTSHVIYGMDADLIC 234
Query: 240 LSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIHK 299
L L+THE + +ILR L+ G P
Sbjct: 235 LGLSTHEENVTILR------------------NQLSETFQGTPN---------------- 260
Query: 300 KKYQFLNIWVLREYLQYEL-DIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIRE 358
+ + +++ R++L+ + +I N ++FER++DDFVFLCFFVGNDFLPH+P L I+
Sbjct: 261 -TFCYFSLFKYRQFLKRDFKNIAN----MDFERVIDDFVFLCFFVGNDFLPHVPLLSIKT 315
Query: 359 GAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAV----------YEDQIFQKR 408
I L+ Y R+F YLT+ GEV + F++ V E + KR
Sbjct: 316 KGIESLLDHYVRDFQNH-SYLTEKGEVKFGVLSSFLRHFVVDYLCALRQEYLELRNVTKR 374
Query: 409 TRI---QQAYEYNEAMK--LNARRESSEELLQAPVA---------------VADTVKLG- 447
R Q+ + +K L++ +E + A VAD +G
Sbjct: 375 ARANVEQRLGKGENELKEVLDSLKEDGSNAAEVSEAAHGIKLSLAKERARFVADRESMGF 434
Query: 448 ---EPGYKERYYADKF--EISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYP 502
+P Y++ YY KF SN +K K + +Y+ G WV RYY +W+W+YP
Sbjct: 435 SYTDPDYRDAYYEKKFGWSASNRTRFEKQIKRLCGEYLRGTQWVMRYYTSGCPAWEWYYP 494
Query: 503 YHYAPFASDLKDLS-DLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPI 561
YHYAP DL + ++ + LG P P QL+ P S ALP + + + DP S +
Sbjct: 495 YHYAPLLEDLAAFNGNVNVKMELGAPRHPIVQLLAVQPRLSLHALPVELHSAVMDPHSVL 554
Query: 562 YKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVML 617
KFYP ++D + F++QG+++LPFID + LLR + L E E R S +L
Sbjct: 555 GKFYPDSVEVDYSEANFSYQGIMRLPFIDCQELLRACET----LVELEPDRGSTLL 606
>gi|221485905|gb|EEE24175.1| conserved hypothetical protein [Toxoplasma gondii GT1]
Length = 2042
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 262/710 (36%), Positives = 354/710 (49%), Gaps = 145/710 (20%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MG+ FYRWL++RYPL + + S P EFDNLYLDMNGI+
Sbjct: 1 MGIGRFYRWLSERYPLINEKITQ---------------TSLP-----EFDNLYLDMNGIL 40
Query: 61 HPCFHPD-GKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRR 119
H C H + G TS D ++ +F +D I V P+K L LA DGVAPRAKMNQQR RR
Sbjct: 41 HTCSHGNSGGMLHTSEDAMWVDVFAALDLIISTVNPKKFLVLAADGVAPRAKMNQQRARR 100
Query: 120 FRAAKDAAE--AEAEEERL----RKEFEEAGKL---LSAKEKPETCDSNVITPGTQFMAV 170
+RAAKDAAE + EE RL RK+ + A K LSA DSN I+PGT+FMA
Sbjct: 101 YRAAKDAAELARQKEEHRLLKMQRKQDKAAAKQEKNLSAPTPGGHFDSNCISPGTEFMAK 160
Query: 171 LSAALQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCL 230
L++F + +LN+ W+ KV+LS +VPGEGEHKIM +IR ++ P N RHCL
Sbjct: 161 FFRHLRFFCEKKLNEDARWKDLKVVLSGPDVPGEGEHKIMQFIRCAKSDPHTGRNVRHCL 220
Query: 231 YGLDADLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWN 290
YGLDADLIMLSLA+HE HF +LRE + GK A
Sbjct: 221 YGLDADLIMLSLASHEPHFCLLREEVVF---------------------GK-----AVSR 254
Query: 291 GVDDTPIHKKK-YQFLNIWVLREYLQYELDI----PNPP--------------------- 324
G D + K++ Q L+I +LREYL E PP
Sbjct: 255 GPQDRMLTKRENLQLLHISLLREYLFLEFAAAALRSTPPKESDEHPKRSETASTSEADAL 314
Query: 325 --------------FPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHVYRR 370
+P ERI+DD+V CF VGNDFLPH +I +G ++LLM Y+
Sbjct: 315 DTKAAAIALCPSLLYPRERERIIDDYVLFCFMVGNDFLPHPKATDIADGGLDLLMSCYKE 374
Query: 371 EF-----------TAMGGYL-TDAGEVLLDR----VEKFIQSVAVYEDQIFQKRTRIQQA 414
+ G +L T G++ + F+ +V Q + ++ ++
Sbjct: 375 YLQRYAVLAEQAPSREGPWLSTGCGQINFCNFFLFLSLFVDTVETDLLQEWAADSQWMKS 434
Query: 415 YEYNEAMKLNARRESSEELLQAPVAVADTVKLGEPGYKERYYADK--FEISNPEEIDKVK 472
N++ RR +SE+ L A Y+E +Y K + S PE ++
Sbjct: 435 KRRNKSEVEEERRPASEDALLA--------------YRESFYLKKMGMDASTPEGRKQID 480
Query: 473 KDVVLKYVEGLCWVCRYYYQ--DVCSWQWFYPYHYAPFASD----------LKDLSDL-- 518
+ + + Y+EGL WV YYY+ W WFYP+HYAPF +D +K L+DL
Sbjct: 481 R-LAVDYLEGLQWVLYYYYRGPQYSGWTWFYPHHYAPFMTDVLSCSFFTEGVKQLADLRR 539
Query: 519 -EITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKR 577
EI F +P+ PF QL+ LP S+S LP+ R ++ P+ + ++P DF++DM G
Sbjct: 540 KEIRFPASKPYAPFMQLLSILPPKSASLLPKALRPILLSPTPELLPYFPDDFEVDMEGCT 599
Query: 578 FAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLD-LLYVHPQH 626
+W GV LPFIDE LL R+ L LT EE RN+ + LLY P
Sbjct: 600 VSWGGVTLLPFIDEMLLHREALPLFSKLTGEEQQRNTRGKNVLLYRDPSQ 649
>gi|237835011|ref|XP_002366803.1| 5'-3' exonuclease, putative [Toxoplasma gondii ME49]
gi|211964467|gb|EEA99662.1| 5'-3' exonuclease, putative [Toxoplasma gondii ME49]
gi|221503733|gb|EEE29417.1| 5'->3' exoribonuclease, putative [Toxoplasma gondii VEG]
Length = 2042
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 262/710 (36%), Positives = 354/710 (49%), Gaps = 145/710 (20%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MG+ FYRWL++RYPL + + S P EFDNLYLDMNGI+
Sbjct: 1 MGIGRFYRWLSERYPLINEKITQ---------------TSLP-----EFDNLYLDMNGIL 40
Query: 61 HPCFHPD-GKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRR 119
H C H + G TS D ++ +F +D I V P+K L LA DGVAPRAKMNQQR RR
Sbjct: 41 HTCSHGNSGGMLHTSEDAMWVDVFAALDLIISTVNPKKFLVLAADGVAPRAKMNQQRARR 100
Query: 120 FRAAKDAAE--AEAEEERL----RKEFEEAGKL---LSAKEKPETCDSNVITPGTQFMAV 170
+RAAKDAAE + EE RL RK+ + A K LSA DSN I+PGT+FMA
Sbjct: 101 YRAAKDAAELARQKEEHRLLKMQRKQDKAAAKQEKNLSAPTPGGHFDSNCISPGTEFMAK 160
Query: 171 LSAALQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCL 230
L++F + +LN+ W+ KV+LS +VPGEGEHKIM +IR ++ P N RHCL
Sbjct: 161 FFRHLRFFCEKKLNEDARWKDLKVVLSGPDVPGEGEHKIMQFIRCAKSDPHTGRNVRHCL 220
Query: 231 YGLDADLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWN 290
YGLDADLIMLSLA+HE HF +LRE + GK A
Sbjct: 221 YGLDADLIMLSLASHEPHFCLLREEVVF---------------------GK-----AVSR 254
Query: 291 GVDDTPIHKKK-YQFLNIWVLREYLQYELDI----PNPP--------------------- 324
G D + K++ Q L+I +LREYL E PP
Sbjct: 255 GPQDRMLTKRENLQLLHISLLREYLFLEFAAAALRSTPPKESDEHPKRSETASTSEADAL 314
Query: 325 --------------FPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHVYRR 370
+P ERI+DD+V CF VGNDFLPH +I +G ++LLM Y+
Sbjct: 315 DTKAAAIALCPSLLYPRERERIIDDYVLFCFMVGNDFLPHPKATDIADGGLDLLMSCYKE 374
Query: 371 EF-----------TAMGGYL-TDAGEVLLDR----VEKFIQSVAVYEDQIFQKRTRIQQA 414
+ G +L T G++ + F+ +V Q + ++ ++
Sbjct: 375 YLQRYAVLAEQAPSREGPWLSTGCGQINFCNFFLFLSLFVDTVETDLLQEWAADSQWMKS 434
Query: 415 YEYNEAMKLNARRESSEELLQAPVAVADTVKLGEPGYKERYYADK--FEISNPEEIDKVK 472
N++ RR +SE+ L A Y+E +Y K + S PE ++
Sbjct: 435 KRRNKSEVEEERRPASEDALLA--------------YRESFYLKKMGMDASTPEGRKQID 480
Query: 473 KDVVLKYVEGLCWVCRYYYQ--DVCSWQWFYPYHYAPFASD----------LKDLSDL-- 518
+ + + Y+EGL WV YYY+ W WFYP+HYAPF +D +K L+DL
Sbjct: 481 R-LAVDYLEGLQWVLYYYYRGPQYSGWTWFYPHHYAPFMTDVLSCSFFTEGVKQLADLRR 539
Query: 519 -EITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKR 577
EI F +P+ PF QL+ LP S+S LP+ R ++ P+ + ++P DF++DM G
Sbjct: 540 KEIRFPASKPYAPFMQLLSILPPKSASLLPKALRPILLSPTPELLPYFPDDFEVDMEGCT 599
Query: 578 FAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLD-LLYVHPQH 626
+W GV LPFIDE LL R+ L LT EE RN+ + LLY P
Sbjct: 600 VSWGGVTLLPFIDEILLHREALPLFSKLTGEEQQRNTRGKNVLLYRDPSQ 649
>gi|50310793|ref|XP_455419.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|74605300|sp|Q6CKX0.3|XRN2_KLULA RecName: Full=5'-3' exoribonuclease 2
gi|49644555|emb|CAG98127.1| KLLA0F07469p [Kluyveromyces lactis]
Length = 992
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 196/436 (44%), Positives = 277/436 (63%), Gaps = 33/436 (7%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP+F+RWL+ +YP I V+EE P ++ +GV P+D S NPNG E DNLYLDMNGI+
Sbjct: 1 MGVPSFFRWLSRKYPKIISPVLEEYPVIE-DGVQLPLDYSSANPNG-ELDNLYLDMNGIV 58
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ KP P + D++ ++F+Y + + + RPRK+L +A+DGVAPRAKMNQQR RRF
Sbjct: 59 HPCSHPENKPPPETEDEMLLAVFEYTNRVLNMARPRKVLMIAVDGVAPRAKMNQQRARRF 118
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPE-TCDSNVITPGTQFMAVLSAALQYFI 179
R+A+DA E++ +E E+ G+ + K + T DSN ITPGT FM L+ AL+Y+
Sbjct: 119 RSARDAKLQNEAREQVLREREDYGETIDENVKSKKTWDSNAITPGTPFMDKLATALRYWT 178
Query: 180 QARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIM 239
+L PGW+ ++I+SDA VPGEGEHKIM++IR QR ++PNT HC+YGLDADLI
Sbjct: 179 SFKLATDPGWKNLQIIISDATVPGEGEHKIMNFIRSQRADTQYNPNTTHCIYGLDADLIF 238
Query: 240 LSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIHK 299
L LATHE HF ILRE + A + KP P D + + +
Sbjct: 239 LGLATHEPHFKILREDV-----------------FANNNYKKP--KPQDMINLSEEEKQQ 279
Query: 300 -------KKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMP 352
K + +L+I VLREYL EL IP+ F +FER +DD+VF+CFF GNDFLPH+P
Sbjct: 280 LIQQDSEKPFLWLHISVLREYLSAELAIPHLSFQFDFERAIDDWVFMCFFCGNDFLPHLP 339
Query: 353 TLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKR---- 408
L++RE +I++L+ +++ YLT G + L+ VE ++ + E +F+K+
Sbjct: 340 CLDVRENSIDILVDIWKTVLPKTKTYLTCDGTLNLEPVEALLEQLGDRETDLFKKKYIQE 399
Query: 409 TRIQQAYEYNEAMKLN 424
R Q+A++ + +K N
Sbjct: 400 VRKQEAHDRRKKLKSN 415
Score = 202 bits (515), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 108/255 (42%), Positives = 155/255 (60%), Gaps = 10/255 (3%)
Query: 438 VAVADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSW 497
+ ++V+L EPGY +RYY KF + ++I ++KDV+ YVEG+ WV YYYQ SW
Sbjct: 582 IDTDESVRLYEPGYHDRYYQHKFHVP-AKDIPALQKDVIRCYVEGISWVLLYYYQGCASW 640
Query: 498 QWFYPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDP 557
W+YPYHYAPFA D K++ +L+I F LGEPF P++QLM LPAAS ALPE +R LM+DP
Sbjct: 641 TWYYPYHYAPFAQDFKNIKNLDIHFDLGEPFLPYEQLMSVLPAASGHALPEIFRPLMSDP 700
Query: 558 SSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVML 617
+S I FYP +F +DMNGK+ AWQG+ LPFIDE LL+ ++ L++ E RN
Sbjct: 701 NSEIIDFYPEEFPVDMNGKKMAWQGIALLPFIDETRLLKTVREQYSKLSDSEKARNVRKK 760
Query: 618 DLLYVHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVNASGGMNGYIWLCERN-GLRSII 676
D L + ++ Y L+ + + P + + + G++G++ E L S +
Sbjct: 761 DALLISNKNVNYD---LFMKNLYGENPVNVIEFR---HFKSGLSGFVTQAEEGFELNSKL 814
Query: 677 PSPVK--GLPDIERN 689
P+ GLPD+ N
Sbjct: 815 ICPINGGGLPDLSTN 829
>gi|385303464|gb|EIF47537.1| 5 -3 exoribonuclease 2 [Dekkera bruxellensis AWRI1499]
Length = 1025
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 194/412 (47%), Positives = 273/412 (66%), Gaps = 20/412 (4%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP+ +RWL+ +YP I V+E+DP + G G+ +P+D S NPNG E DNLYLDMNGI+
Sbjct: 1 MGVPSLFRWLSRKYPKIISPVIEDDPVIVG-GIEQPLDYSAXNPNG-ELDNLYLDMNGIV 58
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ KPAP S D++ ++F+Y + + + RPRKLL +A+DGVAPRAKMNQQR+RRF
Sbjct: 59 HPCSHPENKPAPESEDEMMLAVFEYTNRVLNMARPRKLLMIAVDGVAPRAKMNQQRSRRF 118
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAK-EKPETCDSNVITPGTQFMAVLSAALQYFI 179
R+A+DA + E ER +E E G+++ +T DSN ITPGT FM +L+ +L++++
Sbjct: 119 RSARDAEISNEERERKMEEMEGRGEVIDESIRHKKTWDSNAITPGTPFMDILAESLRFWV 178
Query: 180 QARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIM 239
+L PGW +VI+SD++VPGEGEHKIM++IR QR+ P ++PNT HC+YGLDADLI
Sbjct: 179 AYKLANDPGWSKLQVIISDSSVPGEGEHKIMNFIRSQRSDPEYNPNTTHCIYGLDADLIF 238
Query: 240 LSLATHEIHFSILREVITLPGQ-QEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPI- 297
LSLATHE HF +LRE + Q Q K Q G D + +
Sbjct: 239 LSLATHEPHFRVLREDVYAKDQLQRKLRNMDQFG--------------IDQQTRNQIELI 284
Query: 298 -HKKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEI 356
KK + +L+I +LREYL EL IP F + ER +DD+VF+CFF GNDFLPH+P L++
Sbjct: 285 DKKKPFIWLHIGILREYLAVELSIPRLSFKFDLERAIDDWVFMCFFCGNDFLPHLPCLDV 344
Query: 357 REGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKR 408
R+ +I+ L+ +++R + GY+T G++ L VE ++ + ED I K+
Sbjct: 345 RDSSIDTLVSIWKRIMPRLKGYITCDGQLDLAGVEALLEELGRMEDTILYKK 396
Score = 192 bits (488), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 85/181 (46%), Positives = 125/181 (69%)
Query: 442 DTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFY 501
D +++ EPG+++RYY KF + E+++++ +++V YVEG+ WV YYYQ SW W+Y
Sbjct: 546 DVIRMWEPGFRKRYYQAKFHTQDEEQLEQICRNMVKGYVEGISWVLLYYYQGCPSWNWYY 605
Query: 502 PYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPI 561
P+HYAPFA D K+L+D+++TF G PF+ F+QLM LPAAS LP+ + LM D S I
Sbjct: 606 PFHYAPFALDFKNLTDIDVTFERGXPFKXFEQLMSVLPAASKHNLPDVFGPLMCDEDSEI 665
Query: 562 YKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLY 621
FYP +FQ+DMNG + +WQG+ LPFIDEK LL+ + LT EE+ RN++ ++L
Sbjct: 666 IDFYPKEFQVDMNGAKMSWQGISLLPFIDEKRLLKAVRSKYGSLTPEEVERNTLKHEILL 725
Query: 622 V 622
+
Sbjct: 726 I 726
>gi|354547470|emb|CCE44204.1| hypothetical protein CPAR2_400060 [Candida parapsilosis]
Length = 966
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 199/441 (45%), Positives = 278/441 (63%), Gaps = 25/441 (5%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPA +RWL+ +YP I V+EED G PNPNG E DNLYLDMNGI+
Sbjct: 1 MGVPALFRWLSKKYPKIISPVIEEDEHEIGG-----AKYEDPNPNG-EIDNLYLDMNGIV 54
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ K P + D++F IF Y D + ++ RPRK+L +A+DGVAPRAKMNQQR RRF
Sbjct: 55 HPCSHPEHKRPPETEDEMFLDIFTYTDRVLMMARPRKVLMIAVDGVAPRAKMNQQRARRF 114
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLS-AKEKPETCDSNVITPGTQFMAVLSAALQYFI 179
R+A+DA + ++ +E E G++++ A + + DSN ITPGT FM L+ AL+Y++
Sbjct: 115 RSAQDAKFKQMAIDKEIREKEARGEMINDAIKGKKQWDSNAITPGTPFMDRLAEALRYWV 174
Query: 180 QARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIM 239
+L+ PGW +VI+SDA VPGEGEHK+MS+IR QR+ P ++PNT+HC+YGLDADLI
Sbjct: 175 AYKLSTDPGWANLQVIISDATVPGEGEHKLMSFIRSQRSDPQYNPNTKHCIYGLDADLIF 234
Query: 240 LSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIHK 299
L LATHE HF +LRE + QQ V VG D + + K
Sbjct: 235 LGLATHEPHFRVLREDV-FANQQRHMTVSDHVGM------------SKDQLSLIEERDKK 281
Query: 300 KKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREG 359
K + +L++ VLREYL EL P FP + ER +DD+VF+CFF GNDFLPH+P+L++R+
Sbjct: 282 KPFLWLHVNVLREYLAIELYNPQISFPFDLERAIDDWVFICFFAGNDFLPHLPSLDVRDN 341
Query: 360 AINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYEYNE 419
I+ L+ +++ + YLT G++ L VE + +A+ ED+IF+ R +++ E N
Sbjct: 342 GIDTLVGCWKKCLPRLRDYLTCDGKLNLQSVEVLLGDLAIKEDEIFRNRFAMEKRREDNR 401
Query: 420 AMKLNARRESSEELLQAPVAV 440
RR+ +EE +A +V
Sbjct: 402 -----KRRKVAEEQDKALKSV 417
Score = 208 bits (529), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 104/211 (49%), Positives = 140/211 (66%), Gaps = 6/211 (2%)
Query: 426 RRESSEELLQAPVAVADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCW 485
+R+ ++ PV D ++L EPGY++RYY KF EE+++V+++VV Y+EG+ W
Sbjct: 523 KRQVDVDIYDEPV---DDIRLHEPGYQKRYYQVKFHCKTDEEVEQVRRNVVKSYIEGISW 579
Query: 486 VCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDL---EITFFLGEPFRPFDQLMGTLPAAS 542
V YYYQ SW WFYPYHYAPFASD+ +L +L I F LGEPFRP++QLM LPAAS
Sbjct: 580 VALYYYQGCPSWTWFYPYHYAPFASDMTNLDELFPDGIKFDLGEPFRPYEQLMSVLPAAS 639
Query: 543 SSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLE 602
S ALPE + LM DP S I +FYP +F+IDMNGK+ +WQG+ LPFIDEK LL +
Sbjct: 640 SHALPEVFHALMKDPDSEIIEFYPEEFEIDMNGKKMSWQGIPLLPFIDEKRLLDAVQGKY 699
Query: 603 VFLTEEELFRNSVMLDLLYVHPQHPLYQQIT 633
LTE E RN+ L++ ++ Y++ T
Sbjct: 700 EELTEYEKERNTNKQAELFISNENKNYKKFT 730
>gi|38569540|gb|AAR24369.1| 5'-3' exoribonuclease 2 isoform 3 [Homo sapiens]
Length = 907
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 194/416 (46%), Positives = 258/416 (62%), Gaps = 46/416 (11%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPAF+RWL+ +YP IV+ VEE E
Sbjct: 1 MGVPAFFRWLSRKYPSIIVNCVEEKTSTKNE----------------------------- 31
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
D++ +IF+YID +F +VRPR+LLY+AIDGVAPRAKMNQQR+RRF
Sbjct: 32 ---------------DEMMVAIFEYIDRLFSIVRPRRLLYMAIDGVAPRAKMNQQRSRRF 76
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQ 180
RA+K+ EA E++R+R+E G L +E E DSN ITPGT+FM L+ L+Y+I
Sbjct: 77 RASKEGMEAAVEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIA 136
Query: 181 ARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
RLN PGW+ VILSDA+ PGEGEHKIM YIR QR P DPNT HCL G DADLIML
Sbjct: 137 DRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIML 196
Query: 241 SLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDT-PIHK 299
LATHE +F+I+RE P + + C +C Q GH +C G P + + + D+ P +
Sbjct: 197 GLATHEPNFTIIREEFK-PNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADSLPCAE 255
Query: 300 KKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREG 359
++ FL + VLREYL+ EL + + PF + ER +DD+VF+CFFVGNDFLPH+P+LEIRE
Sbjct: 256 GEFIFLRLNVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREN 315
Query: 360 AINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAY 415
AI+ L+++Y+ GGYLT++G V L RV+ + +V ED IF+KR + ++
Sbjct: 316 AIDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSF 371
Score = 209 bits (531), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 114/253 (45%), Positives = 154/253 (60%), Gaps = 10/253 (3%)
Query: 442 DTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFY 501
D V+L E G+K+RYY +KF++ +E K ++ VV YVEGLCWV RYYYQ SW+W+Y
Sbjct: 464 DNVRLWEAGWKQRYYKNKFDVDAADE--KFRRKVVQSYVEGLCWVLRYYYQGCASWKWYY 521
Query: 502 PYHYAPFASDLKDLSDLEITFFLG-EPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSP 560
P+HYAPFASD + ++D+ F G +PF+P +QLMG PAAS + LP +R LM+DP S
Sbjct: 522 PFHYAPFASDFEGIADMPSDFEKGTKPFKPLEQLMGVFPAASGNFLPPSWRKLMSDPDSS 581
Query: 561 IYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLL 620
I FYP DF ID+NGK++AWQGV LPF+DE+ L +++ LT EE RNS+ D+L
Sbjct: 582 IIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEETRRNSLGGDVL 641
Query: 621 YVHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVNASGGMNGYIWLCERNGL-RSIIPSP 679
+V HPL+ I Q P E+ G+ G L E L I+ SP
Sbjct: 642 FVGKHHPLHDFILELYQTGSTEP------VEVPPELCHGIQGKFSLDEEAILPDQIVCSP 695
Query: 680 VKGLPDIERNQAM 692
V L D+ +N +
Sbjct: 696 VPMLRDLTQNTVV 708
>gi|378755557|gb|EHY65583.1| hypothetical protein NERG_01190 [Nematocida sp. 1 ERTm2]
Length = 613
Score = 370 bits (950), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 226/637 (35%), Positives = 333/637 (52%), Gaps = 98/637 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP+ +RW+A RYP SI +V +GV DNLYLD+NGII
Sbjct: 1 MGVPSLFRWIAKRYPKSI-------NKVANQGV----------------DNLYLDLNGII 37
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP GK AP S ++F+ IF +DH+ +VRP++L+Y+A+DGVAPRAKMNQQR RRF
Sbjct: 38 HPCCHPRGKDAPGSEKEMFQEIFRMVDHLVAIVRPKQLMYIAVDGVAPRAKMNQQRERRF 97
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQ 180
R KD + E D N ITPGT FM L A+ +I+
Sbjct: 98 R-PKDPTDGHVE---------------------GGFDPNTITPGTPFMYRLHTAITRYIE 135
Query: 181 ARLNQ-IPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIM 239
R + + GW+ VI S +VPGEGEHKI ++R + RH + GLDADLI
Sbjct: 136 QRQSAGVNGWKQLAVIYSGCDVPGEGEHKIYDFVRSIKG-----SGVRHVICGLDADLIF 190
Query: 240 LSLATHEIHFSILREVITLPGQQEK--CFVCGQVGHLAAECHGKPGDNPADWNGVDDTPI 297
LSLATHE F +LRE + ++E+ C +C + GH C+ P P
Sbjct: 191 LSLATHEQSFRVLREDVFFLEREERSSCQLCKKDGHSTGNCN--PNAFPP---------- 238
Query: 298 HKKKYQFLNIWVLREYLQYELDIP-NPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEI 356
Y +L+I ++R YL + N F +FERI+DD++F+CFFVGNDFLP +P+++I
Sbjct: 239 ----YIYLDIDIIRRYLYTDFSTAINARF--DFERILDDWIFVCFFVGNDFLPSIPSMDI 292
Query: 357 REGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYE 416
+ AI + Y YLT ++ ++ + ++++ ED + + +
Sbjct: 293 KVAAIETITGSYLTNLITRRAYLTQDRKINMEELAVLMKTLGEQEDALLRSKLSC----- 347
Query: 417 YNEAMKLNARRESSEELLQAPVAVADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVV 476
Y +A K E+L +KL E + YY K S PEEI +
Sbjct: 348 YVKAAKRRGETPRDEDL---------RIKLFEEKGRNEYYQMKMHASTPEEI----TNSC 394
Query: 477 LKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDL----SDLEITFFLGEPFRPFD 532
++Y++GL W+ YYY SW+W+YP H+AP A D+ + ++ F +G+ +P +
Sbjct: 395 IEYIKGLSWILEYYYNGCPSWEWYYPMHFAPLARDIAETLLSHPNISFEFEVGKARKPLE 454
Query: 533 QLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEK 592
Q+M LP +SSS++PE + D + + YP +IDM GK AWQGV +PF+D
Sbjct: 455 QVMAVLPQSSSSSIPEGLYPIFKD----MPENYPETIKIDMFGKTQAWQGVPLIPFLDCD 510
Query: 593 LLLRQTKKLEVFLTEEELFRNSVMLDLLYVHPQHPLY 629
++ ++ L E+++RN DLL++ ++ Y
Sbjct: 511 KMVTLVREYSADLPLEDIYRNVEGQDLLFLPTENKNY 547
>gi|213405427|ref|XP_002173485.1| 5'-3' exoribonuclease [Schizosaccharomyces japonicus yFS275]
gi|212001532|gb|EEB07192.1| 5'-3' exoribonuclease [Schizosaccharomyces japonicus yFS275]
Length = 963
Score = 369 bits (948), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 198/412 (48%), Positives = 264/412 (64%), Gaps = 21/412 (5%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MG+PA +R L+ +Y I V+E +V +G D+++PNPNG E DNLYLDMNGI+
Sbjct: 1 MGIPALFRLLSRKYTKVITPVIEVPSKVLPDGTEFGPDLAEPNPNG-ECDNLYLDMNGIV 59
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ +P P + D++ ++F+Y D I +VRPR LL +AIDGVAPRAKMNQQR+RRF
Sbjct: 60 HPCSHPEDRPPPETEDEMMLAVFEYTDRILAMVRPRNLLMIAIDGVAPRAKMNQQRSRRF 119
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKE-KPETCDSNVITPGTQFMAVLSAALQYFI 179
R+A++AA+ A E +E +E G + K + DSN ITPGT FM +L+ AL+Y+I
Sbjct: 120 RSAREAAQKAAALEECVREAKEKGIPVDENAAKKKAWDSNCITPGTPFMDILAKALRYYI 179
Query: 180 QARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIM 239
+LN P ++ + +LSDA+VPGEGEHKIM +IR QR P +DPNTRH +YGLDADLIM
Sbjct: 180 THKLNTEPAFKNLRFLLSDASVPGEGEHKIMEFIRSQRVNPEYDPNTRHVIYGLDADLIM 239
Query: 240 LSLATHEIHFSILREVITLPGQQEKCFVCGQVGHL----AAECHGKPGDNPADWNGVDDT 295
L LATHE HF +LRE + + Q+G + A E P P W
Sbjct: 240 LGLATHEPHFRVLREDVFFQQGSTRRSKKEQLGLVPKIEATEAPKAPVKKPFIW------ 293
Query: 296 PIHKKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLE 355
LN+ +LREYL+ EL +PN PFP + ER +DD+VF FFVGNDFLPH+P+L+
Sbjct: 294 ---------LNVDILREYLEIELQVPNLPFPFDLERAIDDWVFFIFFVGNDFLPHLPSLD 344
Query: 356 IREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQK 407
IR+GA+ L +R MGGYLT G V L R E + + ED+IF++
Sbjct: 345 IRDGALERLTEAWRLCLPHMGGYLTLDGSVNLSRAEVILSVIGDQEDEIFRR 396
Score = 219 bits (557), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 107/194 (55%), Positives = 136/194 (70%), Gaps = 6/194 (3%)
Query: 441 ADTVKLGEPGYKERYYADKF--EISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQ 498
DTV+L EPGY+ERYY KF E +N E+I ++ V YV+GLCWV YYYQ SW
Sbjct: 580 GDTVRLWEPGYRERYYTQKFHFEENNEEQI----REAVYHYVKGLCWVLLYYYQGCPSWT 635
Query: 499 WFYPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPS 558
W+YP+HYAPFA+D K+LS L+I+F L +PF+P++QL+G LPAAS LPEK + LMTDP
Sbjct: 636 WYYPFHYAPFAADFKNLSSLKISFDLNQPFKPYEQLLGVLPAASKENLPEKLQKLMTDPD 695
Query: 559 SPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLD 618
S I FYP +F ID+NGK+F WQGV LPFIDEK LL K+ LTEEE RN+
Sbjct: 696 SEIIDFYPENFVIDLNGKKFEWQGVALLPFIDEKRLLDAVAKVYPELTEEESRRNTQGPP 755
Query: 619 LLYVHPQHPLYQQI 632
LL+ +HP+Y ++
Sbjct: 756 LLFFSEKHPMYNEV 769
>gi|403218305|emb|CCK72796.1| hypothetical protein KNAG_0L01770 [Kazachstania naganishii CBS
8797]
Length = 1003
Score = 369 bits (947), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 202/439 (46%), Positives = 277/439 (63%), Gaps = 31/439 (7%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP+F+RWL+ +YP I V+EE PQ+ +GV P+D S N NG E DNLYLDMNGI+
Sbjct: 1 MGVPSFFRWLSRKYPKIISPVLEERPQI-VDGVELPIDYSTENANG-ELDNLYLDMNGIV 58
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ KP P + D++ ++F+Y + + RPRK+L +A+DGVAPRAKMNQQR RR
Sbjct: 59 HPCSHPENKPPPETEDEMLLAVFEYTHRVLNMARPRKVLVMAVDGVAPRAKMNQQRARRL 118
Query: 121 RAAKDAA-EAEAEEERLRKEFEEAGKLL--SAKEKPETCDSNVITPGTQFMAVLSAALQY 177
AKDA + E +EE LRK E G+++ S K K +T DSN ITPGT FM L+ AL+Y
Sbjct: 119 GLAKDAELQNEKKEEELRKR-EHYGEVIDDSVKAK-KTWDSNAITPGTPFMDKLALALRY 176
Query: 178 FIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADL 237
+ +L PGW+ +V++SDA VPGEGEHKIM++IR QR P ++PNT HC+YGLDADL
Sbjct: 177 WTAFKLATDPGWKNLQVVISDATVPGEGEHKIMNFIRSQRADPEYNPNTSHCIYGLDADL 236
Query: 238 IMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPI 297
I L LATHE HF ILRE + A E D A+ ++ I
Sbjct: 237 IFLGLATHEPHFKILREDV-----------------FAQEYKSSKRDIDANNMTEEERQI 279
Query: 298 -----HKKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMP 352
+K + +L+I +LREYL EL +P PF + ER +DD+VF+CFF GNDFLPH+P
Sbjct: 280 LLKRDAEKPFLWLHIGILREYLAAELFVPRLPFAFDLERAIDDWVFMCFFCGNDFLPHLP 339
Query: 353 TLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQ 412
L++RE +I++L+ ++++ +M Y+T G++ L VE ++ + E IFQ +
Sbjct: 340 CLDVRENSIDILLDIWKKVLPSMKTYMTCDGQLNLASVEVVLRQLGAREPDIFQTKYIQT 399
Query: 413 QAYE--YNEAMKLNARRES 429
Q E Y + K N + S
Sbjct: 400 QRNEARYRQNNKRNGKNVS 418
Score = 211 bits (538), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 115/264 (43%), Positives = 158/264 (59%), Gaps = 9/264 (3%)
Query: 429 SSEELLQAPVAVADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCR 488
SS EL + DTV+L E GYKERYY KF IS ++I+ ++KD+V Y+EG+ WV
Sbjct: 579 SSSELTGGVIDTDDTVRLHESGYKERYYTGKFNISK-DQIEPLRKDMVKSYIEGVSWVLL 637
Query: 489 YYYQDVCSWQWFYPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPE 548
YYYQ SW W+YPYHYAPFA+D D++D+++ F GEPF P++QLM LPAAS LP
Sbjct: 638 YYYQGCPSWNWYYPYHYAPFAADFFDINDIKVEFKQGEPFLPYEQLMSVLPAASGHTLPP 697
Query: 549 KYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEE 608
+R LM+D SPI FYP +F+IDMNGK+ +WQG+ LPFIDEK LL + L+EE
Sbjct: 698 IFRPLMSDVDSPIIDFYPQEFKIDMNGKKMSWQGIALLPFIDEKRLLETVRAQYPKLSEE 757
Query: 609 ELFRNSVMLDLLYVHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVNASGGMNGYIWL-C 667
E RN D+L + ++ Y++ +LY + + G++G +
Sbjct: 758 ERARNCRNEDILLISNKNANYEKFV--KKLYKDSKEHTDVLFR---HFKTGLSGIVATDV 812
Query: 668 ERNGLRSIIPSPVKG--LPDIERN 689
E L +P PV G LP++ N
Sbjct: 813 EGFTLNGKLPCPVHGGSLPELSTN 836
>gi|397617693|gb|EJK64564.1| hypothetical protein THAOC_14691, partial [Thalassiosira oceanica]
Length = 1534
Score = 369 bits (947), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 272/839 (32%), Positives = 389/839 (46%), Gaps = 227/839 (27%)
Query: 1 MGVPAFYRWLADRYPL---------------------SIVDVVEEDPQV-------DGEG 32
MGVP F+RWL++RYPL S + + P DG
Sbjct: 124 MGVPKFFRWLSERYPLINQPIHCVPREETKKAHGLLPSDANSSDGQPSTSSSGGEKDGAD 183
Query: 33 VARPVDVSKPN------PNGM-EFDNLYLDMNGIIHPCFHP----------DGKPA---- 71
PV+ K P+ M EFD LYLDMNGIIH H DGK +
Sbjct: 184 TPFPVEGKKDARKNTDIPHIMPEFDRLYLDMNGIIHCASHNNSEEEVEKQIDGKESTDTD 243
Query: 72 -------PTSYDDVFKSIFDYIDHIFL-LVRPRKLLYLAIDGVAPRAKMNQQRTRRFRAA 123
+ + +F+++ Y+D + +V+P +L++LAIDGVAPRAK+NQQR+RR+R+
Sbjct: 244 RPRIVGSAITEEQIFQNVCYYLDRVISDIVQPTELVFLAIDGVAPRAKLNQQRSRRYRSG 303
Query: 124 K----------------------DAAE--AEAE------------EERLRKEFEEAGKLL 147
D+AE EA+ ++ R +GK+
Sbjct: 304 TEEEIEHHLMTLQRAKSSDHSDVDSAEYLIEADGGAFDGFWPMDRDDTARGAQRFSGKIE 363
Query: 148 SAKEKPETCD-------------SNVITPGTQFMAVLSAALQYFIQARLNQIPGWQFTKV 194
+ +K + SN ITPGT F S+ + FI+ +L+ P W+ +
Sbjct: 364 ATTDKSSSASVSVDQTPTVQGFHSNAITPGTLFFDRCSSRIIAFIREKLDTDPRWKNLTI 423
Query: 195 ILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIMLSLATHEIHFSILRE 254
I S +VPGEGEHKIM +IR +++ P +DPN +HC+YG D DL+MLSLATHE H +LRE
Sbjct: 424 IFSGHDVPGEGEHKIMDFIRHEKHKPEYDPNKKHCIYGQDGDLVMLSLATHEPHMCLLRE 483
Query: 255 VITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDD-------------TPIHKKK 301
+ + K + LA H K D A G + IH
Sbjct: 484 EVVFDMARRKV-----LERLAKVEHEKALDERAQDVGESSEGKSLPLLSPSIASYIHNAN 538
Query: 302 YQFLNIWVLREYLQYELDI-----PNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEI 356
++ L++ +LR+YL E + N F E +DDFVF+ FFVGNDFLPHMP L+I
Sbjct: 539 FELLHVSLLRDYLGLEFETQEFYSKNSRF--KLEPTIDDFVFMTFFVGNDFLPHMPALDI 596
Query: 357 REGAINLLMHVYR-------------------------REFTAMGGYLTDAGEVLL-DRV 390
+ A +LL + Y+ R T YLTDAG + R+
Sbjct: 597 GDEAFDLLFYAYKKNRIKWLKDGEYRRTVKITDKNNKTRNKTMHHPYLTDAGNITSGTRL 656
Query: 391 EKFIQSVAVYEDQIFQKRTRIQQAYEYNEAMKLNARRESSEELLQAPVAVADTVKL-GEP 449
E F+ V YED + R + E NE ++ A R++ E + P V D V++ G+
Sbjct: 657 EAFLSDVGGYEDPYYSNRR--ESMEEENERIR-KADRKAGRESVLPPQDVLDQVEMVGQE 713
Query: 450 GY----------------------------------------KERYYADKFEIS--NPEE 467
Y K RYY +KF I+ + E+
Sbjct: 714 AYHNMLLQSADLNAQEVEFTPVMSGDIPDSAFMNKLNSLVDVKGRYYYEKFGITPFDAEK 773
Query: 468 IDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDL--EITFF-- 523
++K+ YV+GL W YYY+ SW WFYPY+Y P SDL +++ + +I+FF
Sbjct: 774 HMTLRKE----YVKGLVWTLEYYYKGCVSWDWFYPYNYGPMISDLTNMNSILNDISFFDK 829
Query: 524 --------------LGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDF 569
GEP RPF+QL+G LP +SS LP+ YR LMT P SP+ ++YP F
Sbjct: 830 DSETQKKGKGVRRVSGEPLRPFEQLLGCLPPSSSYLLPKPYRWLMTSPESPLKEYYPESF 889
Query: 570 QIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKL--EVFLTEEELFRNSVMLDLLYVHPQH 626
+DMNGKR+ W+ V LPFID L+ ++ L E FL+EEE N + ++ ++
Sbjct: 890 TVDMNGKRWPWEAVTLLPFIDADKLIEASRTLVDESFLSEEEKKLNVIGQSRVFTRSEN 948
>gi|294872967|ref|XP_002766468.1| 5'->3' exoribonuclease, putative [Perkinsus marinus ATCC 50983]
gi|239867348|gb|EEQ99185.1| 5'->3' exoribonuclease, putative [Perkinsus marinus ATCC 50983]
Length = 649
Score = 369 bits (946), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 237/628 (37%), Positives = 324/628 (51%), Gaps = 104/628 (16%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP FYRWL++RYPL ++ V E Q+ EFD LYLDMNGII
Sbjct: 1 MGVPRFYRWLSERYPL--INEVIEPEQIP------------------EFDCLYLDMNGII 40
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
H C H D D+V+ IF YI +F ++P+KLLY+A+DGVAPRAKMNQQR+RRF
Sbjct: 41 HHCSHGDTPDVAKPEDEVWMDIFKYISDLFTHIKPKKLLYMAVDGVAPRAKMNQQRSRRF 100
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQ 180
R A DA EA ER K + K DSN ITPGT FM L+ L++F Q
Sbjct: 101 RTALDAVEAT---ERAVKNGDHP------KSIDTFFDSNSITPGTAFMERLTVQLRFFAQ 151
Query: 181 ARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
+++ P WQ +V++S NVPGEGEHKIM YIR ++ P +DPNTRHC+YGLDADLIML
Sbjct: 152 KMISENPLWQGVEVVVSGPNVPGEGEHKIMDYIRATKSQPDYDPNTRHCVYGLDADLIML 211
Query: 241 SLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIHKK 300
SLATHE + ++LRE + G D + +
Sbjct: 212 SLATHEPYVALLREEVIF------------------------GPEKTDARAL----VRPD 243
Query: 301 KYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGA 360
+ Q L+I+VLREYL E + ER++DDFV C VGNDFLPH+P + +G
Sbjct: 244 RLQLLHIYVLREYLALEFG------EEDLERVIDDFVLFCMLVGNDFLPHLPYTGVGDGG 297
Query: 361 INLLMHVYR----REFTAMGGYLTDAGEVLLDRVEKFIQSVAVYED-------------- 402
+ L Y+ ++ ++ +L + G + F+Q + VY
Sbjct: 298 LERLFSAYKEYREKQISSADPWLVEHGGGI--NWANFLQYLTVYSSSEEKFLADEVSKGH 355
Query: 403 -QIFQKRTRIQQAYEYNEAMKLNARRESSEELLQAPVAVADTVKLGEPGY-------KER 454
QI +R RI + Y+ RR + ++ +K G GY + +
Sbjct: 356 WQIGSERERILFS-PYHTFFNSERRRCGGNGRGGSHMSYEYQLKTGF-GYPKSPEEARLQ 413
Query: 455 YYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDL-K 513
+Y K E + E+D++ +D Y+EGL W YYY+ SW W+Y +HYAPF +
Sbjct: 414 FYKVKGECDDKAEVDELVRD----YLEGLQWSYSYYYRGPPSWHWYYRHHYAPFVCTMVN 469
Query: 514 DLSDL-----EITFFLGEPFRPFDQLMGTLPAASSSA-LPEKYRNLMTDPSSPIYKFYPP 567
D D +I F G P PF QLM LPA+S LP+ + L T SSP+ ++YP
Sbjct: 470 DFDDFVTAGGQIKFDGGGPVTPFQQLMTVLPASSGQRLLPKIFAKLFTSSSSPVKQYYPE 529
Query: 568 DFQIDMNGKRFAWQGVVKLPFIDEKLLL 595
F ID++G + W G + F+DE +L
Sbjct: 530 RFDIDIDGVKVPWGGTTLINFVDEDVLF 557
>gi|294951471|ref|XP_002786997.1| 5'->3' exoribonuclease, putative [Perkinsus marinus ATCC 50983]
gi|239901587|gb|EER18793.1| 5'->3' exoribonuclease, putative [Perkinsus marinus ATCC 50983]
Length = 728
Score = 368 bits (945), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 237/628 (37%), Positives = 324/628 (51%), Gaps = 104/628 (16%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP FYRWL++RYPL ++ V E Q+ EFD LYLDMNGII
Sbjct: 1 MGVPRFYRWLSERYPL--INEVIEPEQIP------------------EFDCLYLDMNGII 40
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
H C H D D+V+ IF YI +F ++P+KLLY+A+DGVAPRAKMNQQR+RRF
Sbjct: 41 HHCSHGDTPDVAKPEDEVWMDIFKYISDLFTHIKPKKLLYMAVDGVAPRAKMNQQRSRRF 100
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQ 180
R A DA EA ER K + K DSN ITPGT FM L+ L++F Q
Sbjct: 101 RTALDAVEAT---ERAVKNGDHP------KSIDTFFDSNSITPGTAFMERLTVQLRFFAQ 151
Query: 181 ARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
+++ P WQ +V++S NVPGEGEHKIM YIR ++ P +DPNTRHC+YGLDADLIML
Sbjct: 152 KMISENPLWQGVEVVVSGPNVPGEGEHKIMDYIRATKSQPDYDPNTRHCVYGLDADLIML 211
Query: 241 SLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIHKK 300
SLATHE + ++LRE + G D + +
Sbjct: 212 SLATHEPYVALLREEVIF------------------------GPEKTDARAL----VRPD 243
Query: 301 KYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGA 360
+ Q L+I+VLREYL E + ER++DDFV C VGNDFLPH+P + +G
Sbjct: 244 RLQLLHIYVLREYLALEFG------EEDLERVIDDFVLFCMLVGNDFLPHLPYTGVGDGG 297
Query: 361 INLLMHVYR----REFTAMGGYLTDAGEVLLDRVEKFIQSVAVYED-------------- 402
+ L Y+ ++ ++ +L + G + F+Q + VY
Sbjct: 298 LERLFGAYKEYREKQISSADPWLVEHGGGI--NWANFLQYLTVYSSSEEKFLADEVSKGH 355
Query: 403 -QIFQKRTRIQQAYEYNEAMKLNARRESSEELLQAPVAVADTVKLGEPGY-------KER 454
QI +R RI + Y+ RR + ++ +K G GY + +
Sbjct: 356 WQIGSERERILFS-PYHTFFNSERRRCGGNGRGGSHMSYEYQLKTGF-GYPKSPEEARLQ 413
Query: 455 YYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDL-K 513
+Y K E + E+D++ +D Y+EGL W YYY+ SW W+Y +HYAPF +
Sbjct: 414 FYKVKGECDDKAEVDELVRD----YLEGLQWSYSYYYRGPPSWHWYYRHHYAPFVCTMVN 469
Query: 514 DLSDL-----EITFFLGEPFRPFDQLMGTLPAASSSA-LPEKYRNLMTDPSSPIYKFYPP 567
D D +I F G P PF QLM LPA+S LP+ + L T SSP+ ++YP
Sbjct: 470 DFDDFVAAGGQIKFDGGGPVTPFQQLMTVLPASSGQRLLPKIFAKLFTSSSSPVKQYYPE 529
Query: 568 DFQIDMNGKRFAWQGVVKLPFIDEKLLL 595
F ID++G + W G + F+DE +L
Sbjct: 530 RFDIDIDGVKAPWGGTTLINFVDEDVLF 557
>gi|342184282|emb|CCC93763.1| putative 5'-3' exoribonuclease 2 [Trypanosoma congolense IL3000]
Length = 785
Score = 367 bits (941), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 232/639 (36%), Positives = 327/639 (51%), Gaps = 83/639 (12%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MG+ FY WL Y I ++ + G+ P D +K G FDNLYLDMNG++
Sbjct: 1 MGIAGFYLWLKRWYATCIENIPMDVVSDAMRGIGHPEDGAK----GPGFDNLYLDMNGLV 56
Query: 61 HPCFHPDGK-PAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRR 119
HPC H P P S +++F+ IF +D +F +VRPRK L + +DGVAP++KMNQQR+RR
Sbjct: 57 HPCCHDTAPLPEPASEEEMFERIFAQVDLVFKIVRPRKCLVMCVDGVAPQSKMNQQRSRR 116
Query: 120 FRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFI 179
FRAA+++ E+ E + G L + D NVITP T FM L A+++FI
Sbjct: 117 FRAAEESVESGRLSAECLAELRKKG--LPEPDIRPRWDHNVITPATPFMERLGLAVEWFI 174
Query: 180 QARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIM 239
+LN+ P W V+ SDA+V GEGEHKIM YIR R PG+DPNT H +YG+DADLI
Sbjct: 175 LKKLNEDPAWGKIVVVFSDAHVAGEGEHKIMQYIRGLRVQPGYDPNTSHVIYGMDADLIC 234
Query: 240 LSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIHK 299
L L THE + +ILR +T D
Sbjct: 235 LGLITHERNVTILRNQLT-----------------------------------DSFQAAH 259
Query: 300 KKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREG 359
+ + +I RE L+ + +N ERI+DDFVFLCFFVGNDFLPH+P + ++
Sbjct: 260 NAFCYFHIAEYRECLRKSFLALS---GMNLERIIDDFVFLCFFVGNDFLPHIPLISLKAK 316
Query: 360 AINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQS-VAVYEDQIFQK----------- 407
+ +L++ Y E YLT+ GEV + F++ VA Y +Q+ ++
Sbjct: 317 GLEMLLNHYVEELCNT-SYLTNKGEVNFAVLPGFLERFVANYMNQLKREYAIMWGMRSRA 375
Query: 408 RTRIQQAYE-YNEAMK-----LNARRESSEE--------LLQAPVAVADTVKLGEP---- 449
+ R++++ E N +K L R ++++ LL A A V EP
Sbjct: 376 KCRVKESLEQCNAGVKAALGDLKPDRSNAQKISNVVYGLLLSAAKERARFVGGKEPLGFS 435
Query: 450 ----GYKERYYADKF--EISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPY 503
++++YY KF + SN + +K +Y G WV RYY SW+WFYPY
Sbjct: 436 YSDENFRDKYYETKFGWDPSNRRKFEKKIARCCAEYYRGTQWVMRYYTVGCPSWEWFYPY 495
Query: 504 HYAPFASDLKDLS-DLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIY 562
+YAP DL S + + LG P P QL+ LP S LPE N + DP S +
Sbjct: 496 YYAPLLEDLAAFSGTVNVEMHLGVPRHPVVQLLAVLPRLSVKGLPEPLHNAVLDPDSVLG 555
Query: 563 KFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKL 601
+FYP +D + F++QGV+KLPFID + L + L
Sbjct: 556 EFYPDTIDVDHSEANFSYQGVLKLPFIDSEKLQAACQTL 594
>gi|281202869|gb|EFA77071.1| 5'-3' exoribonuclease [Polysphondylium pallidum PN500]
Length = 1091
Score = 367 bits (941), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 195/427 (45%), Positives = 265/427 (62%), Gaps = 37/427 (8%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MG+PAF+RW+ D+Y IV E Q DG V D S+PN NG EFDNLYLDMNGII
Sbjct: 1 MGIPAFFRWMVDKYNGIIVPTKEPRHQ-DGSRVV--CDNSEPNLNG-EFDNLYLDMNGII 56
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ P P + D+ SI +Y+D +F +VRPR LLY+AIDGVAPRAKMNQQR+RRF
Sbjct: 57 HPCAHPEQGPKPRNTQDMMDSIMEYLDLVFAIVRPRNLLYMAIDGVAPRAKMNQQRSRRF 116
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGK--------LLSAKEKPETCDSNVITPGTQFMAVLS 172
R+A DA +E + E GK L AK++ DSN ITPGT FM +++
Sbjct: 117 RSALDARLTREKEAKELMENIANGKMSESEVEALQKAKDEKFHFDSNCITPGTMFMDLVA 176
Query: 173 AALQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYG 232
L+ ++ +++ P W+ KVI+SDA++PGEGEHKIM YIR QR ++PN ++ +YG
Sbjct: 177 LTLRSYVAEKVSTDPAWKNLKVIISDASIPGEGEHKIMDYIRKQRAQKDYNPNQKNVIYG 236
Query: 233 LDADLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGV 292
LDADLIML+LATHE +F ILRE + G++++ P + G
Sbjct: 237 LDADLIMLALATHEPNFEILREFVQTKGRKQQS-------------------TPKEMQGG 277
Query: 293 DDTPIHK-----KKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDF 347
DD K K YQ L++ + R+YL EL +P F + ER++DDF+ +CFFVGNDF
Sbjct: 278 DDGEEEKKDFLTKDYQLLSLNLFRDYLDSELKC-SPAFGFDIERVIDDFILICFFVGNDF 336
Query: 348 LPHMPTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQK 407
LPH+P+L+I EGAI+ +M +Y+ YLT+ GE +DRV K +A+ E+ I +
Sbjct: 337 LPHLPSLQINEGAIDRIMKIYKDLLPTFDDYLTEDGEFSIDRVGKIFAKLAMVEEDIMMR 396
Query: 408 RTRIQQA 414
R ++A
Sbjct: 397 RKSKEEA 403
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 89/187 (47%), Positives = 114/187 (60%), Gaps = 8/187 (4%)
Query: 444 VKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPY 503
VK+G G++ERYY FE S +E D V V Y++GL WV +YYY+ SW W+YPY
Sbjct: 575 VKIGTKGWRERYYNHHFE-SEAKEDDNVVLHVCQSYIDGLAWVLKYYYKGCASWGWYYPY 633
Query: 504 HYAPFASDLKDLSDL--EITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLM-----TD 556
HYAPF D+ + +L TF LG PFRPF+QLM LP S +P+ Y+ +M +
Sbjct: 634 HYAPFIIDISENIELIKPATFDLGSPFRPFEQLMSVLPKESGQFVPKPYQKMMGIDDGSG 693
Query: 557 PSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVM 616
SPI FYP +F ID+ + W+GV LPFIDEK LL K LE LT+EE FRNS
Sbjct: 694 DVSPIIHFYPSNFMIDVQPSQPIWKGVCLLPFIDEKELLSSLKSLENKLTDEEKFRNSQG 753
Query: 617 LDLLYVH 623
+LL V+
Sbjct: 754 AELLIVN 760
>gi|242023600|ref|XP_002432220.1| 5'-3' exoribonuclease, putative [Pediculus humanus corporis]
gi|212517617|gb|EEB19482.1| 5'-3' exoribonuclease, putative [Pediculus humanus corporis]
Length = 1587
Score = 366 bits (940), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 217/661 (32%), Positives = 338/661 (51%), Gaps = 100/661 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP YR++ RYP + D VE QV F+N Y+D+N II
Sbjct: 1 MGVPRLYRFINRRYPC-VTDYVEVH-QVP------------------HFENFYIDLNEII 40
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
H CF + T ++F IF YI+ +F L++P+KL +L++DGVAP+AKMN QR RRF
Sbjct: 41 HVCFKDETASGKTK--EIFSKIFTYIEFLFNLIKPKKLFFLSVDGVAPKAKMNNQRGRRF 98
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKP---ETCDSNVITPGTQFMAVLSAALQY 177
+AAK E E + L A+ KP E +S I+PGT+FM L L Y
Sbjct: 99 QAAK--------------ELENENQKLLAEGKPIPDENFNSLCISPGTEFMEELDKHLNY 144
Query: 178 FIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADL 237
FI+ +++ WQ VI S PGEGEHKIM YIR R FDP RHC+Y DADL
Sbjct: 145 FIRKKISTDSMWQKIVVIYSGYKTPGEGEHKIMDYIRYLRTTSDFDPYIRHCIYSSDADL 204
Query: 238 IMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPI 297
++L LA HEI+ SILR +++K +
Sbjct: 205 MLLGLALHEINVSILRRDPDSSSKEKKSNASKE--------------------------- 237
Query: 298 HKKKYQFLNIWVLREYLQYELDIPNP--PFPINFERIVDDFVFLCFFVGNDFLPHMPTLE 355
+K F+++ +LR+YL E PF + E ++DD++ + F +GNDF+P++P ++
Sbjct: 238 --EKNIFVHLSILRDYLDLEFQELKGCLPFEYDLEHLIDDWILMTFLMGNDFIPNLPNIQ 295
Query: 356 IREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQK-------- 407
I + +++ Y++ + GY+ G + L R +KF+ ++ ++ + F++
Sbjct: 296 IDTNGVLVVLEAYKKIIQTLDGYINLNGYLNLPRFQKFLNKLSEHDMESFRETFADLAFL 355
Query: 408 --RTRIQQAYEYNEAMKLNARRESS--EELLQAP----------------VAVADTVKLG 447
+ + +E ++ + +++ S EEL+++ DT
Sbjct: 356 EGKCNQLRPFENDDDLSDESQKRKSDLEELIKSTNDMFEFSDEEENHDDDDDDDDTFLFE 415
Query: 448 EPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAP 507
K+ YY+DK E + + K++ Y++ + W+ YY+ SW W+YPYHY+P
Sbjct: 416 FKMKKKNYYSDKMCFD--EMTEDISKNLTKNYIQTIQWILFYYFHGCASWTWYYPYHYSP 473
Query: 508 FASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPP 567
F SD+K+ D + + GEP PFDQL+ LPA+ + LPE Y +LM SP+ F+P
Sbjct: 474 FLSDIKNFEDYNLEYNKGEPLLPFDQLVSILPASGKNYLPEVYHDLMNSTDSPLKDFFPD 533
Query: 568 DFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVHPQHP 627
DF+ D+NGK+ W+ ++ +PF+D+ +L+ T L LTE+E RNS L+Y +
Sbjct: 534 DFKRDLNGKKADWESIILIPFVDQDEVLKYTTPLRNKLTEKEKIRNSHAPMLIYTYTDKN 593
Query: 628 L 628
L
Sbjct: 594 L 594
>gi|261332676|emb|CBH15671.1| 5'-3' exoribonuclease 2, putative [Trypanosoma brucei gambiense
DAL972]
Length = 801
Score = 366 bits (940), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 237/631 (37%), Positives = 329/631 (52%), Gaps = 85/631 (13%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MG+ FY WL Y + DV PQ E ++ K +FDNLYLD+NG++
Sbjct: 1 MGIAGFYLWLKRWYASCMEDV----PQCVVEAASKSSPPPKEYMQSHKFDNLYLDLNGLV 56
Query: 61 HPCFH-PDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRR 119
HPC H P P S +++F+ +F ID +F +VRPRK L L +DGVAP++KMNQQR+RR
Sbjct: 57 HPCCHDTSPLPEPESEEEMFERVFTQIDLVFKVVRPRKCLILCVDGVAPQSKMNQQRSRR 116
Query: 120 FRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFI 179
FRAA++ AE E + E G L + E D NVITP T FM L A+++F+
Sbjct: 117 FRAAEERAEGEVMSAKCADVLLEKG--LPYPKVRERWDHNVITPSTPFMERLGLAIEWFV 174
Query: 180 QARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIM 239
++N+ P W+ V+ SDA+VPGEGEHKIM YIR R PG+DP+T H +YG+DADLI
Sbjct: 175 VKKVNEDPLWKKVAVVFSDAHVPGEGEHKIMQYIRGLRMQPGYDPDTSHVIYGMDADLIS 234
Query: 240 LSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIHK 299
L L+THE +ILR Q+ HG
Sbjct: 235 LGLSTHEKSVTILR---------------NQLNETFNAAHG------------------- 260
Query: 300 KKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREG 359
K+ + ++ RE L+ + D ++FER+VDDF+FLCFFVGNDFLPH+P + I+
Sbjct: 261 -KFCYFSLVKFRECLKRDFDGIK---EMSFERVVDDFIFLCFFVGNDFLPHVPLISIKTR 316
Query: 360 AINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSV-----AVYEDQI-----FQKRT 409
+ LL+ Y EF A YLTD GEV + F+ +V D+ ++R
Sbjct: 317 GVELLLDHYVNEF-ASHSYLTDGGEVRFKALSSFLARFLNDYGSVLRDESSFGERAKERG 375
Query: 410 RIQQAYEYNEAM-------------KLNARR--ESSEELLQAPVA-----VADTVKLG-- 447
R A N+ K NA+ +++ +L+ + + V D LG
Sbjct: 376 RGNVAERVNKYQVELKKVLASVKRDKTNAQEVSDTAHKLMVSALKERVSFVGDKGSLGFT 435
Query: 448 --EPGYKERYYADKFEISNPEEIDKVKKDV---VLKYVEGLCWVCRYYYQDVCSWQWFYP 502
+ Y+++YY KF +PE+ K +K V +Y+ G WV RYY SW WFYP
Sbjct: 436 YHDEDYRDKYYQKKFGW-DPEKRSKFEKRVKRCCAEYLRGTQWVMRYYTSGCPSWNWFYP 494
Query: 503 YHYAPFASDLKDLSD-LEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPI 561
YHYAP DL +D +++ F G P P QL+ LP S LP + + DP+S
Sbjct: 495 YHYAPLLDDLARFTDSVDVEFERGTPRHPVVQLLAVLPRMSVGGLPVELHGAVLDPNSVF 554
Query: 562 YKFYPPDFQIDMNGKRFAWQGVVKLPFIDEK 592
FYP +D + FA+QGV++LPFID K
Sbjct: 555 GPFYPDHVDVDYSEAIFAYQGVLRLPFIDCK 585
>gi|71747618|ref|XP_822864.1| 5'-3' exoribonuclease XRND [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|70832532|gb|EAN78036.1| 5'-3' exoribonuclease XRND, putative [Trypanosoma brucei brucei
strain 927/4 GUTat10.1]
Length = 801
Score = 366 bits (940), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 237/631 (37%), Positives = 329/631 (52%), Gaps = 85/631 (13%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MG+ FY WL Y + DV PQ E ++ K +FDNLYLD+NG++
Sbjct: 1 MGIAGFYLWLKRWYASCMEDV----PQCVVEAASKSSPPPKEYMQSHKFDNLYLDLNGLV 56
Query: 61 HPCFH-PDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRR 119
HPC H P P S +++F+ +F ID +F +VRPRK L L +DGVAP++KMNQQR+RR
Sbjct: 57 HPCCHDTSPLPEPESEEEMFERVFTQIDLVFKVVRPRKCLILCVDGVAPQSKMNQQRSRR 116
Query: 120 FRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFI 179
FRAA++ AE E + E G L + E D NVITP T FM L A+++F+
Sbjct: 117 FRAAEERAEGEVMSAKCADVLLEKG--LPYPKVRERWDHNVITPSTPFMERLGLAIEWFV 174
Query: 180 QARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIM 239
++N+ P W+ V+ SDA+VPGEGEHKIM YIR R PG+DP+T H +YG+DADLI
Sbjct: 175 VKKVNEDPLWKKVAVVFSDAHVPGEGEHKIMQYIRGLRMQPGYDPDTSHVIYGMDADLIS 234
Query: 240 LSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIHK 299
L L+THE +ILR Q+ HG
Sbjct: 235 LGLSTHEKSVTILR---------------NQLNETFNAAHG------------------- 260
Query: 300 KKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREG 359
K+ + ++ RE L+ + D ++FER+VDDF+FLCFFVGNDFLPH+P + I+
Sbjct: 261 -KFCYFSLVKFRECLKRDFDGIK---EMSFERVVDDFIFLCFFVGNDFLPHVPLISIKTR 316
Query: 360 AINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSV-----AVYEDQI-----FQKRT 409
+ LL+ Y EF A YLTD GEV + F+ +V D+ ++R
Sbjct: 317 GVELLLDHYVNEF-ASHSYLTDGGEVRFKALSSFLARFLNDYGSVLRDESSFGERAKERG 375
Query: 410 RIQQAYEYNEAM-------------KLNARR--ESSEELLQAPVA-----VADTVKLG-- 447
R A N+ K NA+ +++ +L+ + + V D LG
Sbjct: 376 RGNVAERVNKYQVELKKVLASVKRDKTNAQEVSDTAHKLMVSALKERVSFVGDKGSLGFT 435
Query: 448 --EPGYKERYYADKFEISNPEEIDKVKKDV---VLKYVEGLCWVCRYYYQDVCSWQWFYP 502
+ Y+++YY KF +PE+ K +K V +Y+ G WV RYY SW WFYP
Sbjct: 436 YHDEDYRDKYYQKKFGW-DPEKRSKFEKRVKRCCAEYLRGTQWVMRYYTSGCPSWNWFYP 494
Query: 503 YHYAPFASDLKDLSD-LEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPI 561
YHYAP DL +D +++ F G P P QL+ LP S LP + + DP+S
Sbjct: 495 YHYAPLLDDLARFTDSVDVEFERGTPRHPVVQLLAVLPRMSVGGLPVELHGAVLDPNSVF 554
Query: 562 YKFYPPDFQIDMNGKRFAWQGVVKLPFIDEK 592
FYP +D + FA+QGV++LPFID K
Sbjct: 555 GPFYPDHVDVDYSEAIFAYQGVLRLPFIDCK 585
>gi|330040606|ref|XP_003239969.1| dhm exonuclease [Cryptomonas paramecium]
gi|327206895|gb|AEA39071.1| dhm exonuclease [Cryptomonas paramecium]
Length = 541
Score = 365 bits (937), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 224/632 (35%), Positives = 326/632 (51%), Gaps = 106/632 (16%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP F+RW+++RYPL ++ ++ +FD YLDMNGI+
Sbjct: 1 MGVPKFFRWISERYPLVNQKIINQN----------------------DFDCFYLDMNGIV 38
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
H CF +P ++F+ IF Y +++F +V+P+KL+++A DGV+PRAKMNQQR+RRF
Sbjct: 39 HSCFQKFS--SPYREKNIFQEIFFYTEYLFRIVKPKKLIFMAFDGVSPRAKMNQQRSRRF 96
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQ 180
R + + K F + + E DSN ITPGT+FM LS + +++
Sbjct: 97 RTKETNMKQN-------KNFTHSNE--------EVFDSNCITPGTEFMKRLSFFFKKWLK 141
Query: 181 ARLNQIPGW-QFTKVILSDANVPGEGEHKIMSYIR-LQRNLPGFDPNT-RHCLYGLDADL 237
++ W Q VI S + VPGEGEHKIM+YIR +Q+ + +T +HCLYGLDADL
Sbjct: 142 NKVKFDSEWKQGCDVIFSSSEVPGEGEHKIMNYIRKIQKVYFQYKKSTLKHCLYGLDADL 201
Query: 238 IMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPI 297
IML L +HE +F++LRE K F G C K + +
Sbjct: 202 IMLGLLSHEKNFTLLRE---------KIFHRGTTTFNKETCLDK-----------NLNLL 241
Query: 298 HKKKYQFLNIWVLREYLQYELDIPNPP--FPINFERIVDDFVFLCFFVGNDFLPHMPTLE 355
+++ L I +LR+ + E P F + ERI+DDF+F+C +GNDF+P +P L
Sbjct: 242 MSEEFHLLEISLLRDMIFLEFK-PKKTILFKYDVERIIDDFIFMCMLLGNDFIPGLPHLN 300
Query: 356 IREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAY 415
I +G +NLL+ Y+ + GYLT ++ R E F + ++
Sbjct: 301 ITQGGLNLLVRSYKEIQQKLDGYLTKKHQIHFGRAELFFRKIS----------------- 343
Query: 416 EYNEAMKLNARRESSEELLQAPVAVADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDV 475
+EA L R E K G YK YY KF+ + E ++
Sbjct: 344 --SEAESLFFFRRKQE-------------KTGNETYKSSYYLSKFKFTYQIE-HGFLSNL 387
Query: 476 VLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLM 535
+ Y+ GL W YY++ SW WFYP +Y+P SDL +L EI F G PF P QL+
Sbjct: 388 IKNYIHGLHWCLFYYHKKCPSWNWFYPEYYSPLCSDLVNLCPFEIFFTKGRPFSPLIQLL 447
Query: 536 GTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLL 595
LP SS LP + NLM + SP+ FYP +++ID+NGK+ W+G+V LPFIDE LL
Sbjct: 448 AVLPPRSSVFLPSSFANLMLNEKSPVKCFYPYEYKIDLNGKKNVWEGIVLLPFIDENKLL 507
Query: 596 RQTKKLEVFLTEEELF-----RNSVMLDLLYV 622
K +F+ +E+L RNS D+++
Sbjct: 508 DAIK---MFIKKEQLSIQEKERNSFARDIVFT 536
>gi|387592987|gb|EIJ88011.1| hypothetical protein NEQG_01455 [Nematocida parisii ERTm3]
Length = 613
Score = 365 bits (936), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 230/647 (35%), Positives = 335/647 (51%), Gaps = 99/647 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP+ +RW+A RYP SI +G E DNLYLD+NGII
Sbjct: 1 MGVPSLFRWIAKRYPKSINAA-----------------------SGQEVDNLYLDLNGII 37
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP + P S +++F+ IF +DH+ +VRP+ LLY+A+DGVAPRAKMNQQR RRF
Sbjct: 38 HPCCHPRNREPPGSEEEMFREIFKTVDHLVSIVRPKHLLYIAVDGVAPRAKMNQQRERRF 97
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQ 180
R KD ++ E G D N ITPGT FM L A+ +I+
Sbjct: 98 R-PKDVSDGHVE-----------GGF----------DPNTITPGTPFMYRLHCAIIRYIE 135
Query: 181 ARLNQ-IPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIM 239
R + I GW+ VI S +VPGEGEHK+ ++R + RH + GLDADLI
Sbjct: 136 QRQSAGINGWKQLAVIYSGCDVPGEGEHKVYDFVRSIKGT-----GVRHAICGLDADLIF 190
Query: 240 LSLATHEIHFSILREVITLPGQQEK--CFVCGQVGHLAAECHGKPGDNPADWNGVDDTPI 297
LSLATHE F +LRE + ++E+ C +C + GH C+ P P
Sbjct: 191 LSLATHEKSFKVLREDVFFLEKEERSTCKLCKKEGHSTGNCN--PNTFPP---------- 238
Query: 298 HKKKYQFLNIWVLREYLQYELDIP-NPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEI 356
Y +L+I ++R YL + N F +FERI+DD++F+CFFVGNDFLP +P+++I
Sbjct: 239 ----YIYLDIDIIRRYLYTDFSTAINARF--DFERILDDWIFVCFFVGNDFLPSIPSMDI 292
Query: 357 REGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYE 416
+ AI + Y YLT+ ++ + + + ++ E+++ + + Y
Sbjct: 293 KVAAIETITTSYINNLLTRRQYLTEDSKINIAELSVLMDTLGETEEKLLRAKL---AGYV 349
Query: 417 YNEAMKLNARRESSEELLQAPVAVADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVV 476
N + A RE E+L VKL E + YY+ K ++PE+I +
Sbjct: 350 KNAKRRGEAPRE--EDL---------KVKLYEEKGRLEYYSSKMHANSPEDI----TNGC 394
Query: 477 LKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASD----LKDLSDLEITFFLGEPFRPFD 532
++Y+ GL W+ +YYY+ SW W+YP H+AP A D LK + L F G +P +
Sbjct: 395 VEYLRGLSWILQYYYKGCPSWNWYYPLHFAPLAQDIADTLKKMPHLSFDFSKGAARKPLE 454
Query: 533 QLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEK 592
Q+M LP +S+S++PE + + + + YP + +IDM GK AWQGV LPF D
Sbjct: 455 QVMAVLPPSSASSIPEGLYPIFNE----MPENYPDEVKIDMFGKTQAWQGVALLPFFDCD 510
Query: 593 LLLRQTKKLEVFLTEEELFRNSVMLDLLYVHPQHPLYQQI-TLYCQL 638
L+ ++ L +E++RN DLL++ + Y TLY
Sbjct: 511 KLVSLVREHSRNLPLDEIYRNVEGCDLLFLPTANKNYATAETLYTNF 557
>gi|448528644|ref|XP_003869739.1| Rat1 5'-->3' exoribonuclease [Candida orthopsilosis Co 90-125]
gi|380354093|emb|CCG23606.1| Rat1 5'-->3' exoribonuclease [Candida orthopsilosis]
Length = 964
Score = 364 bits (935), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 188/409 (45%), Positives = 263/409 (64%), Gaps = 20/409 (4%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPA +RWL+ +YP I V+EED G PNPNG E DNLYLDMNGI+
Sbjct: 1 MGVPALFRWLSKKYPKIISPVIEEDQHEIGG-----AKYEDPNPNG-EIDNLYLDMNGIV 54
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ K P + D++F IF Y D + ++ RPRK+L +A+DGVAPRAKMNQQR RRF
Sbjct: 55 HPCSHPEHKRPPETEDEMFLDIFTYTDRVLMMARPRKVLMIAVDGVAPRAKMNQQRARRF 114
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLS-AKEKPETCDSNVITPGTQFMAVLSAALQYFI 179
R+A+DA + ++ +E E G++++ A + + DSN ITPGT FM L+ AL+Y++
Sbjct: 115 RSAQDAKFKQMAIDKEIREKEARGEMINDAVKGKKQWDSNAITPGTPFMDRLAEALRYWV 174
Query: 180 QARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIM 239
+L+ PGW +VI+SDA VPGEGEHK+MS+IR QR+ P ++PNT+HC+YGLDADLI
Sbjct: 175 AYKLSTDPGWANLQVIISDATVPGEGEHKLMSFIRSQRSDPQYNPNTKHCIYGLDADLIF 234
Query: 240 LSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIHK 299
L LATHE HF +LRE + Q+ V VG D + + +
Sbjct: 235 LGLATHEPHFRVLREDV-FANQERHMTVSDHVGM------------SKDQLSLIEERDKR 281
Query: 300 KKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREG 359
K + +L++ VLREYL EL P F + ER +DD+VF+CFF GNDFLPH+P+L++R+
Sbjct: 282 KPFLWLHVNVLREYLSIELFNPQISFSFDLERAIDDWVFICFFAGNDFLPHLPSLDVRDN 341
Query: 360 AINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKR 408
I+ L++ +++ + YLT G++ L VE + +A+ ED+IF+ R
Sbjct: 342 GIDTLVNCWKKCLPRLRDYLTCDGKLNLQSVETLLGDLAIKEDEIFRNR 390
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 99/195 (50%), Positives = 132/195 (67%), Gaps = 3/195 (1%)
Query: 442 DTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFY 501
D ++L EPGY++RYY KF EE+++V++DVV Y+EG+ WV YYYQ SW WFY
Sbjct: 533 DDIRLHEPGYQKRYYQAKFHCKTDEEVEQVRRDVVKSYIEGISWVALYYYQGCPSWTWFY 592
Query: 502 PYHYAPFASDLKDLSDL---EITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPS 558
PYHYAPFASD+ +L +L I F LGEPF+P++QLM LPAASS ALPE + LM DP
Sbjct: 593 PYHYAPFASDMTNLRELFPGGIKFNLGEPFKPYEQLMSVLPAASSHALPEVFHALMKDPD 652
Query: 559 SPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLD 618
S I +FYP +F+IDMNGK+ +WQG+ LPFI+EK LL + LTE E RN+
Sbjct: 653 SEIIEFYPEEFEIDMNGKKMSWQGIPLLPFINEKRLLDAVQGKYDQLTEYEKERNTNKQA 712
Query: 619 LLYVHPQHPLYQQIT 633
L++ ++ Y++
Sbjct: 713 ELFISNENKNYKRFA 727
>gi|387596301|gb|EIJ93923.1| hypothetical protein NEPG_01495 [Nematocida parisii ERTm1]
Length = 613
Score = 364 bits (934), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 230/647 (35%), Positives = 335/647 (51%), Gaps = 99/647 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP+ +RW+A RYP SI +G E DNLYLD+NGII
Sbjct: 1 MGVPSLFRWIAKRYPKSINAA-----------------------SGQEVDNLYLDLNGII 37
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP + P S +++F+ IF +DH+ +VRP+ LLY+A+DGVAPRAKMNQQR RRF
Sbjct: 38 HPCCHPRNREPPGSEEEMFREIFKTVDHLVSIVRPKHLLYIAVDGVAPRAKMNQQRERRF 97
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQ 180
R KD ++ E G D N ITPGT FM L A+ +I+
Sbjct: 98 R-PKDVSDGHVE-----------GGF----------DPNTITPGTPFMYRLHCAIIRYIE 135
Query: 181 ARLNQ-IPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIM 239
R + I GW+ VI S +VPGEGEHK+ ++R + RH + GLDADLI
Sbjct: 136 QRQSAGINGWKQLAVIYSGCDVPGEGEHKVYDFVRSIKGT-----GVRHAICGLDADLIF 190
Query: 240 LSLATHEIHFSILREVITLPGQQEK--CFVCGQVGHLAAECHGKPGDNPADWNGVDDTPI 297
LSLATHE F +LRE + ++E+ C +C + GH C+ P P
Sbjct: 191 LSLATHEKSFKVLREDVFFLEKEERSTCKLCKKEGHSTGNCN--PNTFPP---------- 238
Query: 298 HKKKYQFLNIWVLREYLQYELDIP-NPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEI 356
Y +L+I ++R YL + N F +FERI+DD++F+CFFVGNDFLP +P+++I
Sbjct: 239 ----YIYLDIDIIRRYLYTDFSTAINARF--DFERILDDWIFVCFFVGNDFLPSIPSMDI 292
Query: 357 REGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYE 416
+ AI + YLT+ ++ + + + ++ E+++ + + Y
Sbjct: 293 KVAAIETITTSCINNLLTRRQYLTEDSKINIAELSVLMDTLGETEEKLLRAKL---AGYV 349
Query: 417 YNEAMKLNARRESSEELLQAPVAVADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVV 476
N + A RE E+L VKL E + YY+ K ++PE+I +V
Sbjct: 350 KNAKRRGEAPRE--EDL---------KVKLYEEKGRLEYYSSKIHANSPEDI----TNVC 394
Query: 477 LKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASD----LKDLSDLEITFFLGEPFRPFD 532
++Y+ GL W+ +YYY+ SW W+YP H+AP A D LK + L F G +P +
Sbjct: 395 VEYLRGLSWILQYYYKGCPSWNWYYPLHFAPLAQDIADTLKKMPHLSFDFSKGAARKPLE 454
Query: 533 QLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEK 592
Q+M LP +S+S++PE + + + + YP + +IDM GK AWQGV LPF D
Sbjct: 455 QVMAVLPPSSASSIPEGLYPIFNE----MPENYPDEVKIDMFGKTQAWQGVALLPFFDCD 510
Query: 593 LLLRQTKKLEVFLTEEELFRNSVMLDLLYVHPQHPLYQQI-TLYCQL 638
L+ ++ L +E++RN DLL++ + Y TLY
Sbjct: 511 KLVSLVREHSRNLPLDEIYRNVEGCDLLFLPTANKNYATAETLYTNF 557
>gi|298707210|emb|CBJ29957.1| 5'-3' exoribonuclease 1 [Ectocarpus siliculosus]
Length = 488
Score = 363 bits (933), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 225/542 (41%), Positives = 300/542 (55%), Gaps = 84/542 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP FYRW+++RYP + Q+ + P EFDNLYLDMNGI+
Sbjct: 1 MGVPKFYRWISERYP--------KINQIVSDSTLLP-----------EFDNLYLDMNGIL 41
Query: 61 HPCFHP--DGKPAPTSYDDVFKSIFDYIDHIFL-LVRPRKLLYLAIDGVAPRAKMNQQRT 117
H C HP DG A S D+ IF YID I +VRPR++LY+AIDGVAPRAKMNQQR+
Sbjct: 42 HTCTHPNDDGLSAQLSERDIILGIFHYIDRIVTHIVRPRRVLYMAIDGVAPRAKMNQQRS 101
Query: 118 RRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQY 177
RRFRA KD EA+ E G+++ + DSN ITPGT+FMA +S L+Y
Sbjct: 102 RRFRARKDMQEAKLIAE-------SKGEVV---DDTAVFDSNCITPGTEFMAKISRHLRY 151
Query: 178 FIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADL 237
F+Q ++ + P W+ V S VPGEGEHKIM+YIR +R+ PNTRHC+YG DADL
Sbjct: 152 FVQKKITEDPLWKALTVTFSGHEVPGEGEHKIMAYIRDERSAGRLPPNTRHCMYGQDADL 211
Query: 238 IMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPI 297
I+L L THE HF++LREV+ G AA G N + V
Sbjct: 212 ILLGLVTHEPHFTLLREVVNF-------------GQNAAR-----GKNASK---VVVKTT 250
Query: 298 HKKKYQFLNIWVLREYL--QYELDIP-NPPFPINFERIVDDFVFLCFFVGNDFLPHMPTL 354
++Q L++ VLREY+ ++ D+P ++ ER+VDDFVFL F VGNDFLPHMP+L
Sbjct: 251 RDAQFQLLHLSVLREYVWAEFTRDMPEETAAEMDRERVVDDFVFLTFLVGNDFLPHMPSL 310
Query: 355 EIREGAINLLMHVYR--REFTAMGGYLTDAGEV-LLDRVEKFIQSVAVYEDQIFQ----- 406
+I E A +LL +YR + GGYLT G + DR+E F+ V ED+IF
Sbjct: 311 DIGEEAFSLLFQIYRSLKPGWGSGGYLTREGTIDCADRLEAFLSEVGSREDEIFSERAEE 370
Query: 407 ------KRTRIQQAYEYNE--------AMKLNARRESSEELLQAPVAVADTVKLGEPGYK 452
+R + + + E A++ R+ S E+ + + + G YK
Sbjct: 371 EAEFRGRRRKTSKRFGRAEEVPSEAEIALEEAKRQRSYEKAMLDTMGYVPETEDGGKDYK 430
Query: 453 ERYYADKFEIS--NPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFAS 510
RYY +KF I+ + E D+++ YVEGL W YYY+ SW WF+P+HY P S
Sbjct: 431 GRYYFEKFGITPLHTEIHDRLRA----AYVEGLLWCLAYYYRGCVSWGWFFPFHYVPMIS 486
Query: 511 DL 512
DL
Sbjct: 487 DL 488
>gi|50550657|ref|XP_502801.1| YALI0D13750p [Yarrowia lipolytica]
gi|74634562|sp|Q6C961.3|XRN2_YARLI RecName: Full=5'-3' exoribonuclease 2
gi|49648669|emb|CAG80989.1| YALI0D13750p [Yarrowia lipolytica CLIB122]
Length = 1010
Score = 363 bits (933), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 210/469 (44%), Positives = 284/469 (60%), Gaps = 57/469 (12%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQ-VDGEGVARPVDVSKPNPNGMEFDNLYLDMNGI 59
MGVP YR L+ + P + DV+E++ VDGE + D S PNPNG E DNLYLDMNGI
Sbjct: 1 MGVPGLYRHLSQKCPKIVSDVIEDETTIVDGEEIP-GSDYSAPNPNG-ELDNLYLDMNGI 58
Query: 60 IHPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRR 119
+HPC HP+G+ AP S D++ ++F Y + + + RPRK+L +AIDGVAPRAKMNQQR RR
Sbjct: 59 VHPCTHPEGEEAPPSEDEMLLAVFKYTERVLNVCRPRKVLMMAIDGVAPRAKMNQQRARR 118
Query: 120 FRAAKDAA-EAEA--EEERLRKEFE-----EAGKLLSA---------KEKPETCDSNVIT 162
FR+AKDAA EAE+ E E K E E GK L KP DSN IT
Sbjct: 119 FRSAKDAAIEAESTLESELKAKTIELQSSGEKGKSLETILDEFKQGLVNKPGKWDSNAIT 178
Query: 163 PGTQFMAVLSAALQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGF 222
PGT FM L+AAL+Y++ +LN PGW+ KV++SDA VPGEGEHKIM +IR QR P +
Sbjct: 179 PGTPFMEKLAAALRYWVGYKLNTEPGWRDLKVVISDATVPGEGEHKIMEFIRSQRGDPTY 238
Query: 223 DPNTRHCLYGLDADLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKP 282
+ NT HC+YGLDADLI L LATHE F +LRE + +Q K GH
Sbjct: 239 NANTSHCIYGLDADLIFLGLATHEPKFKLLREDVF---RQNKT-----AGH--------- 281
Query: 283 GDNPADWNGVDDTPIHKKKYQFLNIWVLREYLQYELDIPNP--PFPINFERIVDDFVFLC 340
KK + +LNI +LREYL+ +L +P P + ER +DD+VFLC
Sbjct: 282 ---------------QKKPFIWLNIDILREYLREDLRFTHPQTKIPFDLERAIDDWVFLC 326
Query: 341 FFVGNDFLPHMPTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVY 400
FFVGNDFLPH+P ++R+G+IN+L++ ++ T Y+T G V L + + +++ A
Sbjct: 327 FFVGNDFLPHLPACDVRDGSINVLVNQWKNGMTRWKDYITCDGHVNLAQAQDLLKNFATQ 386
Query: 401 EDQIF--QKRTRIQ-QAYEYNEAMKLNARRESSEELLQAPVAVADTVKL 446
E +I Q++ R++ + + N+A K A R+S + Q A +++ L
Sbjct: 387 EQRILVHQEQDRVEYEKSQANKAAKQQAHRDSKKLRQQGEQAALESMPL 435
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 81/186 (43%), Positives = 118/186 (63%), Gaps = 1/186 (0%)
Query: 438 VAVADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSW 497
AD V+ + GY ERYY +KF + +E+D +++ V +Y++G+CWV YYY SW
Sbjct: 535 TGYADHVQFHKSGYTERYYMNKFH-AKEDEVDNLRRQVAEEYMKGVCWVLMYYYHGCQSW 593
Query: 498 QWFYPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDP 557
WFYPYHYAP A D +S++++ F PFRP++QLM LPAAS LP +R LM++
Sbjct: 594 SWFYPYHYAPLAGDFDQISNMKVEFGESAPFRPYEQLMSVLPAASGHNLPAVFRPLMSEE 653
Query: 558 SSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVML 617
+SPI +YP +FQ+D+NGK+ W+ VV LPFI+ LL + LT EE RN++
Sbjct: 654 NSPIIDYYPENFQLDLNGKKQEWKAVVLLPFINADHLLEHVQAKYTELTPEEKDRNTLRE 713
Query: 618 DLLYVH 623
+++ H
Sbjct: 714 EIVIFH 719
>gi|325185573|emb|CCA20056.1| 5'3' exoribonuclease 1 putative [Albugo laibachii Nc14]
Length = 1515
Score = 363 bits (931), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 235/692 (33%), Positives = 358/692 (51%), Gaps = 118/692 (17%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MG+P FY ++++RYPL + + G + EFD YLDMNGI+
Sbjct: 1 MGIPRFYAYISERYPLI-------NQTISGLSLL------------PEFDCFYLDMNGIL 41
Query: 61 HPCFHPDGKP---APTSYDDVFKSIFDYIDH-IFLLVRPRKLLYLAIDGVAPRAKMNQQR 116
H C H + +P ++++ F++I Y+D + +V+PRKL+YLAIDGVAPRAK+NQQR
Sbjct: 42 HVCTHNNNSSDDASPATFEEQFQAIVRYLDRLVTCIVKPRKLVYLAIDGVAPRAKLNQQR 101
Query: 117 TRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQ 176
+RRF A E E L E E+ G + + DS+ ITPGT+F+ +S L
Sbjct: 102 SRRFSAGLVRQEKVKE---LALEMEKNGTTC----EKDLFDSSCITPGTEFLERISEQLV 154
Query: 177 YFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDAD 236
YFI+ ++ P W +V S + VPGEGEHKIM +IR ++ +D N RHC+YG DAD
Sbjct: 155 YFIRHKIKNDPLWSRLEVYFSGSEVPGEGEHKIMDFIRQRKMSARYDANVRHCMYGSDAD 214
Query: 237 LIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTP 296
L++LSL HE HF+++RE + G + GK +G +
Sbjct: 215 LMLLSLMAHEPHFTLIREHVDW-------------GSGGFKSKGK-------LSGSEKKK 254
Query: 297 IHKKKYQFLNIWVLREYLQYELDIPNP-------PFPINFERIVDDFVFLCFFVGNDFLP 349
I + ++Q +++ + REYL E+ + P ++ ER++DDF+FL F GNDF+P
Sbjct: 255 IQEDQWQLVHLSLFREYLMMEMRVKYPLGGQVQIDERLDGERMIDDFIFLTFLFGNDFIP 314
Query: 350 HMPTLEIREGAINLLMHVYRREFTAMGG--YLTDAGEVL-LDRVEKFIQSVAVYEDQIFQ 406
H PTLEIRE AI +L+ VYR YLTD+G+++ ++ ++ + E++I
Sbjct: 315 HSPTLEIRENAIPILLKVYRELLDEQKSVQYLTDSGKLVNVELLQALFLKIGSMEEEILS 374
Query: 407 KRTRIQQAYEYNEAMKLNARRESSEE-----LLQAPVA---------------------- 439
KR +++ + + + R +E + Q PV
Sbjct: 375 KRAEVERKKRNRKHYRSDKRPAIPDEIDTKCMPQLPVVDELDEDEAAEIEFALALDQEAE 434
Query: 440 ----------VADTVKL-GEPGYKE---RYYADKFEI--SNPEEIDKVKKDVVLKYVEGL 483
V++ + L G +++ YY KF + + + + +++ ++E L
Sbjct: 435 FDSQDEYEDDVSELLTLSGTESFQDTKWTYYERKFGLQRGDGDAGNSDLQEIRKHFLEAL 494
Query: 484 CWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDL--EITF-------FLGEPFRPFDQL 534
W YY+Q SW W+YP+HY+P SDL ++D+ EITF + P PF+QL
Sbjct: 495 VWCLAYYFQGPPSWSWYYPHHYSPMISDLTGIADILKEITFPSVSETGAVDGPLLPFEQL 554
Query: 535 MGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLL 594
+ LP++S+ LP+ ++ LM P SPI FYP FQ+DM GKR W+GV LPFID + L
Sbjct: 555 LANLPSSSAHLLPKPFQFLMQSPLSPIKHFYPATFQVDMEGKRNDWEGVTVLPFIDIEQL 614
Query: 595 LRQTKKLEVF----LTEEELFRNSVMLDLLYV 622
+ LE LTE E RN + L L +
Sbjct: 615 --RAAILEHCPMDQLTEAECKRNRLQLHALKI 644
>gi|222447124|pdb|3FQD|A Chain A, Crystal Structure Of The S. Pombe Rat1-Rai1 Complex
Length = 899
Score = 362 bits (929), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 203/433 (46%), Positives = 276/433 (63%), Gaps = 16/433 (3%)
Query: 2 GVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGIIH 61
GVPA +R L+ ++ I V+E + +G D+S PNPNG+E DNLYLD NGI+H
Sbjct: 5 GVPALFRLLSRKFAKVITPVIEAPTEKLPDGTEIEPDLSLPNPNGVECDNLYLDXNGIVH 64
Query: 62 PCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRFR 121
PC HP+ +PAP + D+ ++F+Y D I VRPR+LL++AIDGVAPRAK NQQR+RRFR
Sbjct: 65 PCSHPEDRPAPETEDEXXVAVFEYTDRILAXVRPRQLLFIAIDGVAPRAKXNQQRSRRFR 124
Query: 122 AAKDAAEAEAEEERLRKEFEEAGKLLSAK-EKPETCDSNVITPGTQFMAVLSAALQYFIQ 180
++++AA E E + +E ++ G + K ++ DSN ITPGT F L+ +L+Y+I
Sbjct: 125 SSREAALKEEELQAFIEEAKQQGIPIDENATKKKSWDSNCITPGTPFXDTLAKSLRYYII 184
Query: 181 ARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
+LN P W+ + ILSDA+VPGEGEHKI +IR QR P +DPNT H +YGLDADLI L
Sbjct: 185 NKLNSDPCWRNVRFILSDASVPGEGEHKIXEFIRSQRVKPEYDPNTHHVVYGLDADLIXL 244
Query: 241 SLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHG-KPGDNPADWNGVDDTPIHK 299
LATHE HF +LRE + F G E G K D+ ++ N V P+ K
Sbjct: 245 GLATHEPHFRVLREDV--------FFQQGSTKKTKEERLGIKRLDDVSETNKV---PV-K 292
Query: 300 KKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREG 359
K + +LN+ +LREYL+ EL +PN PFP + ER +DD+VF FFVGNDFLPH+P+L+IR+G
Sbjct: 293 KPFIWLNVSILREYLEVELYVPNLPFPFDLERAIDDWVFFIFFVGNDFLPHLPSLDIRDG 352
Query: 360 AINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYEYNE 419
A+ L ++R GGYLT G V L R E + +V ED IF++ QQ NE
Sbjct: 353 AVERLTEIWRASLPHXGGYLTLDGSVNLARAEVILSAVGNQEDDIFKRLK--QQEDRRNE 410
Query: 420 AMKLNARRESSEE 432
+ +RES++E
Sbjct: 411 NYRRRQQRESNQE 423
Score = 219 bits (557), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 107/201 (53%), Positives = 137/201 (68%), Gaps = 4/201 (1%)
Query: 441 ADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWF 500
DTV+L EPGY+ERYY KF IS P+E +K++ + V YV GLCWV YYYQ SW W+
Sbjct: 584 TDTVRLYEPGYRERYYEQKFHIS-PDEPEKIR-EAVKHYVHGLCWVLLYYYQGCPSWTWY 641
Query: 501 YPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSP 560
YPYHYAPFA+D KDL+ +++ F L +PF+P++QL+G LPAAS + LPEK + L TD +S
Sbjct: 642 YPYHYAPFAADFKDLASIDVKFELNQPFKPYEQLLGVLPAASKNNLPEKLQTLXTDENSE 701
Query: 561 IYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLL 620
I FYP +F ID+NGK+F WQGV LPFIDE LL K+ LTEEE RN LL
Sbjct: 702 IIDFYPENFTIDLNGKKFEWQGVALLPFIDENRLLNAVSKIYPQLTEEESKRNEDGSTLL 761
Query: 621 YVHPQHPLYQQITLYCQLYHQ 641
++ HP + + L QLY +
Sbjct: 762 FISEHHPXFSE--LVKQLYSK 780
>gi|401405148|ref|XP_003882024.1| putative 5'-3' exonuclease [Neospora caninum Liverpool]
gi|325116438|emb|CBZ51991.1| putative 5'-3' exonuclease [Neospora caninum Liverpool]
Length = 2070
Score = 361 bits (926), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 255/705 (36%), Positives = 350/705 (49%), Gaps = 138/705 (19%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MG+ FYRWL++RYPL + + S P EFDNLYLDMNGI+
Sbjct: 1 MGIGRFYRWLSERYPLINEKITQ---------------ASLP-----EFDNLYLDMNGIL 40
Query: 61 HPCFHPD-GKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRR 119
H C H + G S D ++ +F +D I V P+K L LA DGVAPRAKMNQQR RR
Sbjct: 41 HTCSHGNSGGMLHESEDAMWVDVFAALDLIISTVNPKKFLVLAADGVAPRAKMNQQRARR 100
Query: 120 FRAAKDAAE--AEAEEERLRKEFEEAGKLLSAKEKPETC---DSNVITPGTQFMAVLSAA 174
+RAAKDAAE + EE RL K + K SA + P + DSN I+PGT+FMA
Sbjct: 101 YRAAKDAAELARQKEEHRLLKMQRKQDK--SAPQSPPSGGHFDSNCISPGTEFMAKFFRH 158
Query: 175 LQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLD 234
L++F + +LN+ W+ KV+LS +VPGEGEHKIM +IR ++ P N RHCLYGLD
Sbjct: 159 LRFFCEKKLNEDARWKHLKVVLSGPDVPGEGEHKIMQFIRCSKSDPHSGRNVRHCLYGLD 218
Query: 235 ADLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDD 294
ADLIMLSLA+HE HF +LRE + GK A G D
Sbjct: 219 ADLIMLSLASHEPHFCLLREEVVF---------------------GK-----AVTKGPQD 252
Query: 295 TPIHKKK-YQFLNIWVLREYLQYELDI--------------------------------- 320
+ K++ Q L+I +LREYL E
Sbjct: 253 RLLTKRENLQLLHISLLREYLFLEFAAVALRAAPALKSSSNEKEQPSRADGAAPAEIVFD 312
Query: 321 ---------PNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHVYRRE 371
P+ +P ERI+DD+V CF VGNDFLPH +I +G ++LLM Y+
Sbjct: 313 ASLGSPSLRPSLLYPRERERIIDDYVLFCFMVGNDFLPHPKATDIADGGLDLLMTCYKEY 372
Query: 372 F-----------TAMGGYL-TDAGEVLLDRVEKFIQS-VAVYEDQIFQKRTRIQQAYEYN 418
+ G +L T G++ F+ V E + Q+ Q +
Sbjct: 373 LQGYAVLAEQAPSPAGPWLSTGCGQIDFCNFFLFLSLFVDTVETDLLQEWAADSQ---WI 429
Query: 419 EAMKLNARRESSEELLQAPVAVADTVKLGEPGYKERYYADKFEIS--NPEEIDKVKKDVV 476
++ + NAR +E P D + Y++ +Y K + PE ++ + +
Sbjct: 430 QSKRRNAREAHAE---SKPPPSGDALL----AYRQAFYLKKMGMDGHTPEGRKQIDR-LA 481
Query: 477 LKYVEGLCWVCRYYYQD--VCSWQWFYPYHYAPFASD----------LKDLSDL---EIT 521
+ Y+EGL WV YY++ W WFYP+HYAPF +D +KDL+DL EI
Sbjct: 482 VDYLEGLQWVLYYYFRGPHYSGWDWFYPHHYAPFMTDVLCCSFFTEGVKDLADLRRKEIR 541
Query: 522 FFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQ 581
F +P+ PF QL+ LP S+S LP+ R ++ PS + ++P DF++DM G W
Sbjct: 542 FPASKPYAPFMQLLSILPPKSASLLPKALRQILLSPSLELLPYFPTDFEVDMEGCTVPWG 601
Query: 582 GVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVHPQH 626
GV LPFI+EKLL ++ L LT EE RN+ ++L +H
Sbjct: 602 GVTLLPFIEEKLLYKEALPLFSKLTGEEARRNTRGKNVLLYRDRH 646
>gi|156034478|ref|XP_001585658.1| hypothetical protein SS1G_13542 [Sclerotinia sclerotiorum 1980]
gi|154698945|gb|EDN98683.1| hypothetical protein SS1G_13542 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 931
Score = 360 bits (923), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 194/429 (45%), Positives = 258/429 (60%), Gaps = 42/429 (9%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDP-QVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGI 59
MGVPA +RWL +YP + V+EE P ++DG+ + P+D+ PNPNG E DNLYLDMNGI
Sbjct: 1 MGVPALFRWLTKQYPKIVSPVIEEQPREIDGQII--PIDIRGPNPNGEECDNLYLDMNGI 58
Query: 60 IHPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRR 119
+HPC HP+ +P P +++ IF Y D + +VRPRKLL +AIDGVAPRAKMNQQR+RR
Sbjct: 59 VHPCSHPEDRPPPKDEEEMMLEIFKYTDRVVNMVRPRKLLMIAIDGVAPRAKMNQQRSRR 118
Query: 120 FRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFI 179
FRAA++A E ++ L K + G E + DSN ITPGT FM +L+A+L+Y+I
Sbjct: 119 FRAAQEAKEKAEDKAELLKMLKSQGTQAEETEVKKAWDSNEITPGTPFMDILAASLRYWI 178
Query: 180 QARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIM 239
+LN P W KVI+SD+ VPGEGEHKIM ++R QR+ P DPNTRH +YGLDADLIM
Sbjct: 179 AYKLNTDPAWAKMKVIISDSTVPGEGEHKIMEFVRSQRSSPDHDPNTRHVMYGLDADLIM 238
Query: 240 LSLATHEIHFSILRE-VITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
L LATHE HF ILRE V G+ C +CGQ GH A EC G +++ P
Sbjct: 239 LGLATHEPHFRILREDVFFNDGKPRTCKLCGQHGHEARECKGMYKIKDGEFDEKASAPT- 297
Query: 299 KKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIRE 358
K + +L++ +LREYL E+ LEIRE
Sbjct: 298 LKPFIWLHVSILREYLAAEI-----------------------------------LEIRE 322
Query: 359 GAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYEYN 418
IN L+ ++R MGGYLT G V L+R + + +A ED IF++R + ++ ++
Sbjct: 323 DGINTLIAIWRDNIPYMGGYLTKDGHVDLERAQFILDGLAKQEDAIFRRRRKAEENFQ-- 380
Query: 419 EAMKLNARR 427
+ KLN R
Sbjct: 381 KKRKLNNER 389
Score = 191 bits (486), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 103/224 (45%), Positives = 136/224 (60%), Gaps = 7/224 (3%)
Query: 442 DTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFY 501
DTV+L E GY +RYY KF +P++I+ + V YVEGL WV YY+Q SW W+Y
Sbjct: 531 DTVRLWEDGYADRYYEQKFN-RDPKDIE-FRHQVGKAYVEGLAWVLLYYFQGCPSWDWYY 588
Query: 502 PYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPI 561
PYHYAPFA+D +L D++I F G FRPF+QLMG LPAAS A+PE++ +LMT+ S I
Sbjct: 589 PYHYAPFAADFANLKDMKINFQKGRIFRPFEQLMGVLPAASRQAIPEQFHHLMTNEDSEI 648
Query: 562 YKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLY 621
FYP DF +D+NGK+FAWQGV LPFID + LL K+ L + RN + D+L
Sbjct: 649 IDFYPEDFIVDLNGKKFAWQGVALLPFIDSERLLDAMAKVYPTLPVDVSARNGLGKDVLL 708
Query: 622 V-HPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVNASGGMNGYI 664
V H LY +IT Q P +++ S G+ G +
Sbjct: 709 VSESHHALYDEITSKFYSKKQGSPH----MKLNPKVSEGLTGRV 748
>gi|307106569|gb|EFN54814.1| hypothetical protein CHLNCDRAFT_24310, partial [Chlorella
variabilis]
Length = 326
Score = 359 bits (921), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 204/337 (60%), Positives = 245/337 (72%), Gaps = 12/337 (3%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP++YRWL+ RYP + DVVE++ QV GV PVD S+PNPNG+EFDNLYLDMNGII
Sbjct: 1 MGVPSYYRWLSQRYPKVVKDVVEDEVQVI-NGVEVPVDTSQPNPNGLEFDNLYLDMNGII 59
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPCFHP+ +PAPT+ +VF ++FDYID +F +VRPRKLLY+AIDGVAPRAKMNQQR+RRF
Sbjct: 60 HPCFHPEDRPAPTTEQEVFTTMFDYIDRLFAIVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQ 180
RAA++A E E EEE+LR EF + G + KE DSNVITPGT FM LS ALQY+I
Sbjct: 120 RAAQEAEEREKEEEKLRDEFAKQGIKVPKKES-AVFDSNVITPGTPFMHRLSVALQYYIH 178
Query: 181 ARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
RLN PGW+ KVILSDAN PGEGEHKIM+YIR QR LPG+ PNTRHC+YGLDADLIML
Sbjct: 179 LRLNADPGWRGIKVILSDANSPGEGEHKIMAYIREQRGLPGYSPNTRHCIYGLDADLIML 238
Query: 241 SLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHG-KPGDNPADWNGVDDTPIHK 299
+LATHE F+ILREV C+ G C G + G + V + K
Sbjct: 239 ALATHEPRFAILREV--------GCWQGWGAGRGGVGCWGARAGRDGGAGMQVGGMWVAK 290
Query: 300 KKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDF 336
K YQFL + VLREYL+ +L + + PFP + ER+ DDF
Sbjct: 291 KPYQFLLVGVLREYLERDLRV-HTPFPWDKERVYDDF 326
>gi|357472639|ref|XP_003606604.1| 5'-3' exoribonuclease [Medicago truncatula]
gi|355507659|gb|AES88801.1| 5'-3' exoribonuclease [Medicago truncatula]
Length = 909
Score = 357 bits (915), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 171/246 (69%), Positives = 198/246 (80%), Gaps = 3/246 (1%)
Query: 168 MAVLSAALQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTR 227
MAVLS ALQY+I RLN PGW+ KVILSDANVPGEGEHKI SYIRLQRNL G+DPNT+
Sbjct: 1 MAVLSVALQYYIHLRLNNDPGWKNIKVILSDANVPGEGEHKITSYIRLQRNLKGYDPNTQ 60
Query: 228 HCLYGLDADLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPA 287
HCLYGLDADLIML LATHEIHFSILREV+ PGQ +KCF+CGQ+GH+AAEC GK
Sbjct: 61 HCLYGLDADLIMLGLATHEIHFSILREVVFTPGQ-DKCFLCGQMGHMAAECEGKAKRKTD 119
Query: 288 DWNGVDDTPIHKKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDF 347
D G D + K +QFLNIW LREYL+YE+ IPN PF I+FE I+DDF+F+CFFVGNDF
Sbjct: 120 DEKG--DAIVAKLPFQFLNIWTLREYLEYEMRIPNSPFEIDFECILDDFIFICFFVGNDF 177
Query: 348 LPHMPTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQK 407
LPHMPTL+IREGAI+ LM VY+ EFT +GGYLT+ + L RVE FIQ+V +ED+IFQK
Sbjct: 178 LPHMPTLDIREGAIDSLMTVYKNEFTKLGGYLTNGSKPNLSRVEHFIQAVGSHEDEIFQK 237
Query: 408 RTRIQQ 413
R R+ Q
Sbjct: 238 RARLHQ 243
Score = 305 bits (780), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 148/253 (58%), Positives = 175/253 (69%), Gaps = 2/253 (0%)
Query: 442 DTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFY 501
D +KLGEPG+KERYY +KF PEE+ ++KDVVLKY EGLCWV YYY+ VCSWQWFY
Sbjct: 360 DKIKLGEPGWKERYYEEKFSAKTPEELVAIRKDVVLKYTEGLCWVMHYYYEGVCSWQWFY 419
Query: 502 PYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPI 561
PYHYAPFASDLK LS+L I F LG PF+PFDQL+G PAASS ALPE YR LMTDPSSPI
Sbjct: 420 PYHYAPFASDLKGLSELNINFELGAPFKPFDQLIGVFPAASSHALPETYRKLMTDPSSPI 479
Query: 562 YKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLY 621
FYP DF++DMNGKRFAWQG+ KLPFIDE LL +K+E FLT EE RN++M D+L+
Sbjct: 480 IDFYPIDFEVDMNGKRFAWQGIAKLPFIDETRLLAAVQKIENFLTPEEKRRNAIMFDMLF 539
Query: 622 VHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVN--ASGGMNGYIWLCERNGLRSIIPSP 679
V+ HPL I+ +R + +N SGGMNGYI C+ SP
Sbjct: 540 VNSCHPLSACISTLDNKCRNTSNCERANVKEKINPIESGGMNGYISFCDGEPCPPFFRSP 599
Query: 680 VKGLPDIERNQAM 692
V G+ DI N +
Sbjct: 600 VAGMEDIIDNHVI 612
>gi|326436856|gb|EGD82426.1| hypothetical protein PTSG_11962 [Salpingoeca sp. ATCC 50818]
Length = 1282
Score = 357 bits (915), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 205/438 (46%), Positives = 279/438 (63%), Gaps = 35/438 (7%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQ-VDGEGVARPVDVSKPNPNGMEFDNLYLDMNGI 59
+GVP+FYRWL+ +YP + DVVE+ PQ + GE V PVD+S+PNPN EFDNLYLDMNGI
Sbjct: 44 VGVPSFYRWLSRKYPKCVKDVVEDRPQNIGGEYV--PVDISQPNPNKREFDNLYLDMNGI 101
Query: 60 IHPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRR 119
IHP HP+ +PAP + DD+F ++ +Y+D + VRPRKLL++AIDGVAPRAKMNQQR+RR
Sbjct: 102 IHPASHPEDRPAPETEDDMFVAVLEYLDRVVACVRPRKLLFMAIDGVAPRAKMNQQRSRR 161
Query: 120 FRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFI 179
F++AK A + + T DSNVITPGT FM L+ L+ FI
Sbjct: 162 FKSAKVCLNAVLWWGCVVGGGGVCISVCVCV----TFDSNVITPGTPFMDKLAEYLRCFI 217
Query: 180 QARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIM 239
+++ PGW KVILSDA VPGEGEHKIM +IR QR P +D NT H ++GLDADLI+
Sbjct: 218 HEKVSSDPGWTGIKVILSDATVPGEGEHKIMDFIRRQRAHPEYDANTSHVIHGLDADLIL 277
Query: 240 LSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAE--CHGKPGDNPADWNGVDDTPI 297
L+LATHE HF+ILRE +T P +EK + LA C
Sbjct: 278 LALATHEPHFTILREEVT-PRNREKSAQEKAMAALAVRRVC------------------- 317
Query: 298 HKKKYQFLNIWVLREYLQYELDIPN--PPFPINFERIVDDFVFLCFFVGNDFLPHMPTLE 355
+ FL + VLREYL+ E+ + + + ER++DDFVF+C FVGNDFLPH+P+L+
Sbjct: 318 ---IWIFLQVNVLREYLEKEMRVADFSAAGGFDLERVIDDFVFMCCFVGNDFLPHLPSLK 374
Query: 356 IREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAY 415
I EGAI+ ++ +YR++F A GGYLT + EV L+RV+ + +A E++I R R ++
Sbjct: 375 INEGAIDTILDLYRKDFPAFGGYLTQSSEVNLERVQLLLHGLAEVENKILSDR-RFKEQR 433
Query: 416 EYNEAMKLNARRESSEEL 433
+ + + ++ + E L
Sbjct: 434 RKQKDVDITNKKTTREHL 451
Score = 210 bits (534), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 105/193 (54%), Positives = 124/193 (64%), Gaps = 8/193 (4%)
Query: 442 DTVKLGEPGYKERYYADKFEISNPEEIDKVK-KDVVLKYVEGLCWVCRYYYQDVCSWQWF 500
+ V LG GY ERYY KF D V+ +DV YVEGLCWV +YYY+ SW WF
Sbjct: 627 EQVNLGLHGYHERYYKLKFG-------DSVQPRDVARAYVEGLCWVMKYYYEGCPSWNWF 679
Query: 501 YPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSP 560
YPYHYAPFA D D++ + I F G PF PF QLM P ASS ALP+ YRNLM DP SP
Sbjct: 680 YPYHYAPFAQDFVDVAGMSIRFDGGSPFTPFQQLMAVFPPASSHALPQAYRNLMLDPKSP 739
Query: 561 IYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLL 620
I FYP +F++D +G RFAWQ V LPFIDE LL LE LTEEE RN+ ++LL
Sbjct: 740 IADFYPREFELDFDGARFAWQAVALLPFIDETRLLTAIAPLESTLTEEERRRNARGVNLL 799
Query: 621 YVHPQHPLYQQIT 633
+VH +HPL Q+
Sbjct: 800 HVHQRHPLALQVV 812
>gi|146104232|ref|XP_001469769.1| putative exoribonuclease 2 [Leishmania infantum JPCM5]
gi|134074139|emb|CAM72881.1| putative exoribonuclease 2 [Leishmania infantum JPCM5]
Length = 879
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 229/677 (33%), Positives = 340/677 (50%), Gaps = 102/677 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MG+ F+ WL Y D ++ PQ + + + + + +DN Y+DMNG+I
Sbjct: 1 MGIAGFFLWLQRWYG----DCIDNIPQDVVDAAFKGQTLPHSHASAYSYDNFYVDMNGLI 56
Query: 61 HPCFHPDGKPAPTSYDDVFKS-IFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRR 119
HPC H ++ +FD +D + +VRP+K L L +DGVAPR+KMNQQR+RR
Sbjct: 57 HPCCHDTAPLPEPENEEEMFERMFDQLDLLVRVVRPKKCLVLCVDGVAPRSKMNQQRSRR 116
Query: 120 FRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKP-----ETCDSNVITPGTQFMAVLSAA 174
FRAA + E++A A +++S P E D NVITP T FM ++ A
Sbjct: 117 FRAADERLESDAISNAC------ADRIVSEYHLPRPRVRERWDHNVITPSTAFMERVALA 170
Query: 175 LQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLD 234
L+++I +LN+ W+ V+ SDA+VPGEGEHKIM YIR R+ PG+D NT H ++G+D
Sbjct: 171 LEWYIMKKLNEDAAWRHLTVVFSDAHVPGEGEHKIMQYIRGLRSQPGYDYNTSHVIHGMD 230
Query: 235 ADLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDD 294
ADLI L L+THE H ILR +T Q
Sbjct: 231 ADLICLGLSTHEKHVCILRNQLTETFQ--------------------------------- 257
Query: 295 TPIHKKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTL 354
P H ++ + N+ RE L D N + FER+VDDF+FLCFFVGNDFLPH+P +
Sbjct: 258 -PDH-NRFCYFNLSTYREKLMQ--DFSNIE-GMQFERVVDDFIFLCFFVGNDFLPHVPLV 312
Query: 355 EIREGAINLLMHVYRREFTAMGGYLTDAGEV--------LLDRVEKFIQSVAVYEDQIFQ 406
I+ I +L+ Y R+F A+ GYLT GEV L++ K + + + +
Sbjct: 313 SIKTRGIEMLLDHYVRDF-ALHGYLTQLGEVDYAHLHIFLMNFTSKCMMKLTKEYYGVVR 371
Query: 407 KRTRIQQAYEYNEAMKLNAR-----------RESSEELLQAPVA------------VADT 443
+ R +Q E K A+ R +++E+ A +A V D
Sbjct: 372 AKERAKQHVE-ERVTKTEAQVSEVLGTLLPDRSNAQEVSDALLALMSSARKERTRLVVDK 430
Query: 444 VKLG----EPGYKERYYADKFE---ISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCS 496
LG + Y++ YY KF +N + + +Y+ GL WV RYY + S
Sbjct: 431 QPLGFSYLDKAYRDAYYQHKFGWDPSANRAAFESHIRLCCAEYLRGLQWVMRYYTKGCPS 490
Query: 497 WQWFYPYHYAPFASDLKDLS-DLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMT 555
W+W++PYHYAP DL + + + + P P +QL+ LP S ALPE+ +
Sbjct: 491 WEWYFPYHYAPLLQDLAAFTATVNVEMRMSAPLHPVEQLLAVLPRLSVHALPEELHEAVN 550
Query: 556 DPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSV 615
DP S + KFYP +D + F++QGV+++PFI+ + L + ++L + EE F ++
Sbjct: 551 DPKSVLGKFYPAIVDVDFSEANFSYQGVLRIPFINCEALSKACRQL---VELEEDFGST- 606
Query: 616 MLDLLYVHPQHPLYQQI 632
LY H L +Q+
Sbjct: 607 ---FLYCHESTSLAKQL 620
>gi|398024282|ref|XP_003865302.1| exoribonuclease 2, putative [Leishmania donovani]
gi|322503539|emb|CBZ38625.1| exoribonuclease 2, putative [Leishmania donovani]
Length = 879
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 229/677 (33%), Positives = 340/677 (50%), Gaps = 102/677 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MG+ F+ WL Y D ++ PQ + + + + + +DN Y+DMNG+I
Sbjct: 1 MGIAGFFLWLQRWYG----DCIDNIPQDVVDAAFKGQTLPHSHASAYSYDNFYVDMNGLI 56
Query: 61 HPCFHPDGKPAPTSYDDVFKS-IFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRR 119
HPC H ++ +FD +D + +VRP+K L L +DGVAPR+KMNQQR+RR
Sbjct: 57 HPCCHDTAPLPEPENEEEMFERMFDQLDLLVRVVRPKKCLVLCVDGVAPRSKMNQQRSRR 116
Query: 120 FRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKP-----ETCDSNVITPGTQFMAVLSAA 174
FRAA + E++A A +++S P E D NVITP T FM ++ A
Sbjct: 117 FRAADERLESDAISNAC------ADRIVSEYHLPRPRVRERWDHNVITPSTAFMERVALA 170
Query: 175 LQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLD 234
L+++I +LN+ W+ V+ SDA+VPGEGEHKIM YIR R+ PG+D NT H ++G+D
Sbjct: 171 LEWYIMKKLNEDAAWRHLTVVFSDAHVPGEGEHKIMQYIRGLRSQPGYDYNTSHVIHGMD 230
Query: 235 ADLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDD 294
ADLI L L+THE H ILR +T Q
Sbjct: 231 ADLICLGLSTHEKHVCILRNQLTETFQ--------------------------------- 257
Query: 295 TPIHKKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTL 354
P H ++ + N+ RE L D N + FER+VDDF+FLCFFVGNDFLPH+P +
Sbjct: 258 -PDH-NRFCYFNLSTYREKLMQ--DFSNIE-GMQFERVVDDFIFLCFFVGNDFLPHVPLV 312
Query: 355 EIREGAINLLMHVYRREFTAMGGYLTDAGEV--------LLDRVEKFIQSVAVYEDQIFQ 406
I+ I +L+ Y R+F A+ GYLT GEV L++ K + + + +
Sbjct: 313 SIKTRGIEMLLDHYVRDF-ALHGYLTQLGEVDYAHLHIFLMNFTSKCMMKLTKEYYGVVR 371
Query: 407 KRTRIQQAYEYNEAMKLNAR-----------RESSEELLQAPVA------------VADT 443
+ R +Q E K A+ R +++E+ A +A V D
Sbjct: 372 AKERAKQHVE-ERVTKTEAQVSEVLGTLLPDRSNAQEVSDALLALMSSARKERTRLVVDK 430
Query: 444 VKLG----EPGYKERYYADKFE---ISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCS 496
LG + Y++ YY KF +N + + +Y+ GL WV RYY + S
Sbjct: 431 QPLGFSYLDKAYRDAYYQHKFGWDPSANRAAFESHIRLCCAEYLRGLQWVMRYYTKGCPS 490
Query: 497 WQWFYPYHYAPFASDLKDLS-DLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMT 555
W+W++PYHYAP DL + + + + P P +QL+ LP S ALPE+ +
Sbjct: 491 WEWYFPYHYAPLLQDLAAFTATVNVEMRMSAPLHPVEQLLAVLPRLSVHALPEELHEAVN 550
Query: 556 DPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSV 615
DP S + KFYP +D + F++QGV+++PFI+ + L + ++L + EE F ++
Sbjct: 551 DPKSVLGKFYPAIVDVDFSEANFSYQGVLRIPFINCEALSKACRQL---VELEEDFGST- 606
Query: 616 MLDLLYVHPQHPLYQQI 632
LY H L +Q+
Sbjct: 607 ---FLYCHESTSLAKQL 620
>gi|328865598|gb|EGG13984.1| 5'-3' exoribonuclease [Dictyostelium fasciculatum]
Length = 1808
Score = 352 bits (904), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 245/639 (38%), Positives = 340/639 (53%), Gaps = 97/639 (15%)
Query: 9 WLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGIIHPCFHP-D 67
W ++RYP I ++V+ +P E+DNLYLDMNGIIH C
Sbjct: 208 WASERYPQIIQNLVDSNPP--------------------EYDNLYLDMNGIIHACSQEMT 247
Query: 68 GKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRFRAAKDAA 127
K S +++ + + +YID +F ++RP KLLY+AIDGVAPR+K+NQQR RRF +
Sbjct: 248 TKLIRFSEEELIRLVCNYIDKLFHIIRPTKLLYMAIDGVAPRSKLNQQRQRRFLSV---- 303
Query: 128 EAEAEEERLRKEFEEAGKLLSAKEKPETCDS-NVITPGTQFMAVLSAALQYFIQARLNQI 186
R+E E+ + KE PE S N ITPGT+FM+ LS LQ+FI+ ++++
Sbjct: 304 --------FREEKEKKELIKEGKELPEVIFSRNAITPGTEFMSNLSECLQFFIKKKISED 355
Query: 187 PGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIMLSLATHE 246
W+ ++I S PGEGEHKI+ YIR + P +DPN HCLYGLDADLI+L+L THE
Sbjct: 356 LSWREIEIIFSGPENPGEGEHKIIDYIRKYKASPDWDPNQSHCLYGLDADLILLALVTHE 415
Query: 247 IHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIHKKKYQFLN 306
HFSILRE I Q K +Q L+
Sbjct: 416 PHFSILREEIAFRPQANKQL----------------------------------DFQLLH 441
Query: 307 IWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMH 366
I +LREY++ EL F + ERI+DDFV + F GNDFLPH+P EI G +N ++
Sbjct: 442 ISLLREYMELELKC-ELDFGYSLERIIDDFVLVMIFFGNDFLPHLPFCEISTGGLNSVLE 500
Query: 367 VYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYEYNEA---MKL 423
+Y+ +GGYLTD E+ LDR+ F+ +AV+E +K+ E NE M L
Sbjct: 501 LYKNSLNELGGYLTDEAEIDLDRLAVFLAKIAVFE----RKQNLTVGEAEENEVVEDMLL 556
Query: 424 NARRESSEELLQAPVAVADTVK--LGEPGYKER------------YYADKFEISNPEE-- 467
+ EE + + +K GE +++ YY KF PEE
Sbjct: 557 ENDVQDDEEKKEIERRAFERLKNHFGEITFEDDDVEDINDYWINGYYRSKFP-DFPEENR 615
Query: 468 --IDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDLEITFFLG 525
I K+ +VLKYVEGL WV YY+ SW+W+YPY+YAP A D++DLS LEI F
Sbjct: 616 SAIVDYKRHLVLKYVEGLSWVLNYYHNGCISWRWYYPYYYAPLAVDMRDLSSLEIEFESN 675
Query: 526 EPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVK 585
P PF QLM LP S+ LP Y+ LMT +SPI FYP +F++D + + + G+
Sbjct: 676 GPVTPFQQLMSVLPPQSAHLLPAPYQELMTSAASPIIDFYPTEFEVDTSDSHY-FDGIAV 734
Query: 586 LPFIDEKLLLRQTKKLEVF-LTEEELFRNSVMLDLLYVH 623
+ F D LL T + + LT++E RN++ ++ H
Sbjct: 735 IGFPDLGRLLEATAAEDSWDLTDKERSRNALRNAVIIYH 773
>gi|401420072|ref|XP_003874525.1| putative exoribonuclease 2 [Leishmania mexicana MHOM/GT/2001/U1103]
gi|322490761|emb|CBZ26025.1| putative exoribonuclease 2 [Leishmania mexicana MHOM/GT/2001/U1103]
Length = 893
Score = 352 bits (904), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 229/677 (33%), Positives = 342/677 (50%), Gaps = 102/677 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MG+ F+ WL Y I ++ ++ +G A P + + +DN Y+DMNG+I
Sbjct: 1 MGIAGFFLWLQRWYGDCIDNIPQDVVDAAFKGQALP----HSHASAYSYDNFYVDMNGLI 56
Query: 61 HPCFHPDGKPAPTSYDDVFKS-IFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRR 119
HPC H ++ +FD +D + +VRP+K L L +DGVAPR+KMNQQR+RR
Sbjct: 57 HPCCHDTAPLPEPENEEEMFERMFDQLDLLVRVVRPKKCLVLCVDGVAPRSKMNQQRSRR 116
Query: 120 FRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKP-----ETCDSNVITPGTQFMAVLSAA 174
FRAA + E++A A +++S P E D NVITP T FM ++ A
Sbjct: 117 FRAADERLESDAISNAC------ADRIVSEYHLPRPRVRERWDHNVITPSTAFMERVALA 170
Query: 175 LQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLD 234
L+++I +LN+ GW+ V+ SDA+VPGEGEHKIM YIR R+ PG+D NT H ++G+D
Sbjct: 171 LEWYIMKKLNEDAGWRHLTVVFSDAHVPGEGEHKIMQYIRGLRSQPGYDYNTSHVIHGMD 230
Query: 235 ADLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDD 294
ADLI L L+THE H ILR +T Q
Sbjct: 231 ADLICLGLSTHEKHVCILRNQLTETFQ--------------------------------- 257
Query: 295 TPIHKKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTL 354
P H ++ + N+ RE L D N + FER+VDDF+FLCFFVGNDFLPH+P +
Sbjct: 258 -PDH-NRFCYFNLSTYREKLMQ--DFANIE-GMQFERVVDDFIFLCFFVGNDFLPHVPLV 312
Query: 355 EIREGAINLLMHVYRREFTAMGGYLTDAGEV--------LLDRVEKFIQSVAVYEDQIFQ 406
I+ I +L+ Y R+F A+ GYLT GEV L++ K + + + +
Sbjct: 313 SIKTRGIEMLLDHYVRDF-ALHGYLTQLGEVDYAHLHIFLMNFTSKCMVKLTKEYYGVVR 371
Query: 407 KRTRIQQAYEYNEAMKLNAR-----------RESSEELLQAPVA------------VADT 443
+ R +Q E K A+ R +++E+ A + V D
Sbjct: 372 AKERAKQHVE-ERVTKTEAQVSEVLATLLPDRSNAQEVSDALLGLMSSARKERTRLVVDK 430
Query: 444 VKLG----EPGYKERYYADKFE---ISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCS 496
LG + Y++ YY KF +N ++ + +Y+ G+ WV RYY + S
Sbjct: 431 QPLGFSYLDKTYRDAYYQHKFGWDPSTNRAAFERQIRLCCAEYLRGMQWVMRYYTKGCPS 490
Query: 497 WQWFYPYHYAPFASDLKDLS-DLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMT 555
W+W++PYHYAP DL + + + + P P +QL+ LP S ALPE+ +
Sbjct: 491 WEWYFPYHYAPLLQDLAAFTATVNVEMRMSAPLHPVEQLLAVLPRLSVHALPEELHEAVN 550
Query: 556 DPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSV 615
DP S + KFYP +D + F++QGV+++PFI+ + L + ++L + EE F ++
Sbjct: 551 DPKSVLGKFYPAIVNVDFSEANFSYQGVLRIPFINCEALSKACRQL---VELEEDFGST- 606
Query: 616 MLDLLYVHPQHPLYQQI 632
LY H L +Q+
Sbjct: 607 ---FLYCHESTSLAKQL 620
>gi|32398787|emb|CAD98497.1| exonuclease ii, possible [Cryptosporidium parvum]
Length = 1572
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 233/711 (32%), Positives = 347/711 (48%), Gaps = 176/711 (24%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MG+ FYRW+++RYP + EE +G+ P FDNLYLD+NGI
Sbjct: 1 MGISRFYRWISERYP----QINEEI----SDGIIPP------------FDNLYLDVNGIA 40
Query: 61 HPCFHPDGKPAPTS--------YDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKM 112
H + P++ +++ +IF YI+ + + +PRKLLY+A+DGVAPRAKM
Sbjct: 41 HNSVNSSEMRTPSNGINLSEKGSPEIWAAIFRYINKLVYIAKPRKLLYIAVDGVAPRAKM 100
Query: 113 NQQRTRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLS 172
NQQR+RRFR+A+D+ K+ E+ + + + DSN ITPGT FM L
Sbjct: 101 NQQRSRRFRSARDS--------EFLKKMEKNNSIDTTQN--NVFDSNCITPGTTFMHELR 150
Query: 173 AALQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYG 232
L++FI +++ P W+ +V+LS A+VPGEGEHKIM +IR ++ ++ NT HCLYG
Sbjct: 151 RQLEFFIYHQIHTDPLWKHLEVVLSGADVPGEGEHKIMDFIRCIKSQRDYNNNTTHCLYG 210
Query: 233 LDADLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGV 292
LDADLIMLSLA+HE HFS+LRE I + N
Sbjct: 211 LDADLIMLSLASHEPHFSLLREEIKFSSSR---------------------------NYE 243
Query: 293 DDTPIHKKKYQFLNIWVLREYLQYELDIPNPPFP-------------------------- 326
T K+++QFL+I +LR+Y+ +L+ N
Sbjct: 244 SRTVCTKERFQFLHISILRDYIINDLNPRNLSVEELNLCFGYKFGLKNDSQDQISIFDNV 303
Query: 327 -INFERIVDDFVFLCFFVGNDFLPHMPTLEIREGAINL-------LMHVYRREFTAMGGY 378
I+ ER++DDF+ L F VGNDFLPH+P + +G + L H + + ++
Sbjct: 304 LIDGERLIDDFIILGFIVGNDFLPHIPFHTVDQGLARIISSYRKYLAHFFLMKLSSSPWI 363
Query: 379 LTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYEYNEAMKLNARRESSEELLQAPV 438
L D G + + +F+ + E + +KR +Y + + + + SS+ +
Sbjct: 364 LEDCGRINYVNLLRFLIWHIISEKEEAEKRI---SNPDYWKKVIPDQNKISSDSIGVPRF 420
Query: 439 AVADTVKLGE--PGYKE-----------RYY-------ADKF--EISNPEEIDKVK---- 472
+D+++ + ++E RYY DKF E SN + +K
Sbjct: 421 MKSDSIEQDKFRAKWQETRPENFEVMRWRYYFVKMAINIDKFFPENSNVQNQANIKSNTN 480
Query: 473 ---------KDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLK---------- 513
+D+V Y+EGL WV YY++ V SW+W+YPY YAPFA D+
Sbjct: 481 SNRITTNSIEDIVFCYLEGLQWVSYYYFRGVPSWRWYYPYRYAPFACDIAIILSCWLQNK 540
Query: 514 -----------------------------DLSDLEITFFLGEPFRPFDQLMGTLPAASSS 544
+L+ L F G P +PF+QLMG LP+ S
Sbjct: 541 SISTLSRDDIVKYGSSKLMFVHTMYSEEIELNGLAFRFIKGNPLQPFEQLMGVLPSNSKD 600
Query: 545 ALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLL 595
LP+ +R L T+P+SP+ FYP +F++DM G + W GV +PFIDE LLL
Sbjct: 601 LLPKPFRKLFTNPNSPLLSFYPANFEVDMEGVKVPWGGVTLIPFIDEFLLL 651
>gi|66475504|ref|XP_627568.1| Kem1p-like 5'-3' exonuclease [Cryptosporidium parvum Iowa II]
gi|46229016|gb|EAK89865.1| Kem1p-like 5'-3' exonuclease [Cryptosporidium parvum Iowa II]
Length = 1588
Score = 350 bits (897), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 233/711 (32%), Positives = 347/711 (48%), Gaps = 176/711 (24%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MG+ FYRW+++RYP + EE +G+ P FDNLYLD+NGI
Sbjct: 1 MGISRFYRWISERYP----QINEEI----SDGIIPP------------FDNLYLDVNGIA 40
Query: 61 HPCFHPDGKPAPTS--------YDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKM 112
H + P++ +++ +IF YI+ + + +PRKLLY+A+DGVAPRAKM
Sbjct: 41 HNSVNSSEMRTPSNGINLSEKGSPEIWAAIFRYINKLVYIAKPRKLLYIAVDGVAPRAKM 100
Query: 113 NQQRTRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLS 172
NQQR+RRFR+A+D+ K+ E+ + + + DSN ITPGT FM L
Sbjct: 101 NQQRSRRFRSARDS--------EFLKKMEKNNSIDTTQN--NVFDSNCITPGTTFMHELR 150
Query: 173 AALQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYG 232
L++FI +++ P W+ +V+LS A+VPGEGEHKIM +IR ++ ++ NT HCLYG
Sbjct: 151 RQLEFFIYHQIHTDPLWKHLEVVLSGADVPGEGEHKIMDFIRCIKSQRDYNNNTTHCLYG 210
Query: 233 LDADLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGV 292
LDADLIMLSLA+HE HFS+LRE I + N
Sbjct: 211 LDADLIMLSLASHEPHFSLLREEIKFSSSR---------------------------NYE 243
Query: 293 DDTPIHKKKYQFLNIWVLREYLQYELDIPNPPFP-------------------------- 326
T K+++QFL+I +LR+Y+ +L+ N
Sbjct: 244 SRTVCTKERFQFLHISILRDYIINDLNPRNLSVEELNLCFGYKFGLKNDSQDQISIFDNV 303
Query: 327 -INFERIVDDFVFLCFFVGNDFLPHMPTLEIREGAINL-------LMHVYRREFTAMGGY 378
I+ ER++DDF+ L F VGNDFLPH+P + +G + L H + + ++
Sbjct: 304 LIDGERLIDDFIILGFIVGNDFLPHIPFHTVDQGLARIISSYRKYLAHFFLMKLSSSPWI 363
Query: 379 LTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYEYNEAMKLNARRESSEELLQAPV 438
L D G + + +F+ + E + +KR +Y + + + + SS+ +
Sbjct: 364 LEDCGRINYVNLLRFLIWHIISEKEEAEKRI---SNPDYWKKVIPDQNKISSDSIGVPRF 420
Query: 439 AVADTVKLGE--PGYKE-----------RYY-------ADKF--EISNPEEIDKVK---- 472
+D+++ + ++E RYY DKF E SN + +K
Sbjct: 421 MKSDSIEQDKFRAKWQETRPENFEVMRWRYYFVKMAINIDKFFPENSNVQNQANIKSNTN 480
Query: 473 ---------KDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLK---------- 513
+D+V Y+EGL WV YY++ V SW+W+YPY YAPFA D+
Sbjct: 481 SNRITTNSIEDIVFCYLEGLQWVSYYYFRGVPSWRWYYPYRYAPFACDIAIILSCWLQNK 540
Query: 514 -----------------------------DLSDLEITFFLGEPFRPFDQLMGTLPAASSS 544
+L+ L F G P +PF+QLMG LP+ S
Sbjct: 541 SISTLSRDDIVKYGSSKLMFVHTMYSEEIELNGLAFRFIKGNPLQPFEQLMGVLPSNSKD 600
Query: 545 ALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLL 595
LP+ +R L T+P+SP+ FYP +F++DM G + W GV +PFIDE LLL
Sbjct: 601 LLPKPFRKLFTNPNSPLLSFYPANFEVDMEGVKVPWGGVTLIPFIDEFLLL 651
>gi|157876822|ref|XP_001686753.1| putative exoribonuclease 2 [Leishmania major strain Friedlin]
gi|68129828|emb|CAJ09134.1| putative exoribonuclease 2 [Leishmania major strain Friedlin]
Length = 895
Score = 350 bits (897), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 228/677 (33%), Positives = 339/677 (50%), Gaps = 102/677 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MG+ F+ WL Y I ++ ++ +G A P + + +DN Y+DMNG+I
Sbjct: 1 MGIAGFFLWLQRWYGDCIDNIPQDVVDAAFKGQALP----HSHASAYSYDNFYVDMNGLI 56
Query: 61 HPCFHPDGKPAPTSYDDVFKS-IFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRR 119
HPC H ++ +FD +D + +VRP+K L L +DGVAPR+KMNQQR+RR
Sbjct: 57 HPCCHDTAPLPEPENEEEMFERMFDQLDLLVRVVRPKKCLVLCVDGVAPRSKMNQQRSRR 116
Query: 120 FRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKP-----ETCDSNVITPGTQFMAVLSAA 174
FRAA + E++A A ++S P E D NVITP T FM ++ A
Sbjct: 117 FRAADERLESDAISNAC------ADSIVSEYHLPRPRVRERWDHNVITPSTAFMERVALA 170
Query: 175 LQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLD 234
L+++I +LN+ W+ V+ SDA+VPGEGEHKIM YIR R+ PG+D NT H ++G+D
Sbjct: 171 LEWYIMKKLNEDAAWRHLTVVFSDAHVPGEGEHKIMQYIRGLRSQPGYDYNTSHVIHGMD 230
Query: 235 ADLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDD 294
ADLI L L+THE H ILR +T Q
Sbjct: 231 ADLICLGLSTHEKHVCILRNQLTETFQ--------------------------------- 257
Query: 295 TPIHKKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTL 354
P H ++ + N+ RE L D N + FER+VDDF+FLCFFVGNDFLPH+P +
Sbjct: 258 -PDH-NRFCYFNLSTYREKLMQ--DFANIE-GMQFERVVDDFIFLCFFVGNDFLPHVPLV 312
Query: 355 EIREGAINLLMHVYRREFTAMGGYLTDAGEV--------LLDRVEKFIQSVAVYEDQIFQ 406
I+ I +L+ Y R+F A+ GYLT GEV L++ K + + + +
Sbjct: 313 SIKTRGIEMLLDHYVRDF-ALHGYLTQLGEVDYAHLHIFLMNFTSKCMMKLTKEYYGVVR 371
Query: 407 KRTRIQQAYEYNEAMKLNAR-----------RESSEELLQAPVA------------VADT 443
+ R +Q E K A+ R +++E+ A + V D
Sbjct: 372 AKERAKQHVE-ERVTKTEAQVSEVLGTLLPDRSNAQEVSDALLGLMSSARKERTRFVVDK 430
Query: 444 VKLG----EPGYKERYYADKFE---ISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCS 496
LG + Y++ YY KF +N + + +Y+ G+ WV RYY + S
Sbjct: 431 QPLGFSYLDKTYRDAYYQHKFGWDPSTNRAAFESQIRLCCAEYLRGMQWVMRYYTKGCPS 490
Query: 497 WQWFYPYHYAPFASDLKDLS-DLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMT 555
W+W++PYHYAP DL + + + + P P +QL+ LP S ALPE+ +
Sbjct: 491 WEWYFPYHYAPLLQDLAAFTATVNVEMRMSAPLHPVEQLLAVLPRLSVHALPEELHEAVN 550
Query: 556 DPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSV 615
DP S + KFYP +D + F++QGV+++PFI+ + L + ++L + EE F ++
Sbjct: 551 DPKSVLGKFYPAIVDVDFSEANFSYQGVLRIPFINCEALSKACRQL---VELEEDFGST- 606
Query: 616 MLDLLYVHPQHPLYQQI 632
LY H L +Q+
Sbjct: 607 ---FLYCHESTSLAKQL 620
>gi|336386148|gb|EGO27294.1| hypothetical protein SERLADRAFT_381861 [Serpula lacrymans var.
lacrymans S7.9]
Length = 318
Score = 348 bits (894), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 166/325 (51%), Positives = 225/325 (69%), Gaps = 12/325 (3%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEED----PQVDGEGVARPVDVSKPNPNGMEFDNLYLDM 56
MGVPA +RWL+ +YP + V EE+ P +G + PV+++ PNPNG EFDNLYLDM
Sbjct: 1 MGVPALFRWLSKKYPKIVQSVAEEEETEMPDAEGINIKVPVNMATPNPNGTEFDNLYLDM 60
Query: 57 NGIIHPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQR 116
NGI+HPC HPD KPAP + +++ IF Y + + +VRPRK+L++AIDGVAPRAKMNQQR
Sbjct: 61 NGIVHPCTHPDNKPAPETEEEMMVDIFSYTERVVNMVRPRKVLFMAIDGVAPRAKMNQQR 120
Query: 117 TRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETC-DSNVITPGTQFMAVLSAAL 175
+RRFR+A++A + E E+E GK +S EK + DSN ITPGT FM +L+ +L
Sbjct: 121 SRRFRSAQEAKDKEEARREAVAEWEAMGKTISDDEKNKVAWDSNAITPGTPFMDLLALSL 180
Query: 176 QYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDA 235
+Y++ ++N PGW+ +VI+SDA+VPGEGEHKIM +IR QR G DPN+RH +YGLDA
Sbjct: 181 RYWVVQKMNTDPGWKDLQVIISDASVPGEGEHKIMDFIRRQRTNVGHDPNSRHVIYGLDA 240
Query: 236 DLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDT 295
DLIML+LATHE HF +LRE + + C +CG+ GH AA+C G + +
Sbjct: 241 DLIMLALATHEPHFKVLREDVFSQDKGTGCRICGEEGHYAAQCTGVKTE-------IKKP 293
Query: 296 PIHKKKYQFLNIWVLREYLQYELDI 320
P KK + FL++ +LREYL+ ELD+
Sbjct: 294 PTEKKPFIFLDVAILREYLEVELDV 318
>gi|154345762|ref|XP_001568818.1| putative exoribonuclease 2 [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134066160|emb|CAM43950.1| putative exoribonuclease 2 [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 899
Score = 348 bits (894), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 230/677 (33%), Positives = 341/677 (50%), Gaps = 102/677 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MG+ F+ WL Y D V+ PQ + + + + + + +DN Y+DMNG+I
Sbjct: 1 MGIAGFFLWLQRWYG----DCVDNVPQDVVDAAFKGQALPRSHASAYSYDNFYVDMNGLI 56
Query: 61 HPCFHPDGKPAPTSYDDVFKS-IFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRR 119
HPC H ++ +FD +D + +VRP+K L L IDGVAPR+KMNQQR+RR
Sbjct: 57 HPCCHDTAPLPEPENEEEMFERMFDQLDLLVRVVRPKKCLVLCIDGVAPRSKMNQQRSRR 116
Query: 120 FRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKP-----ETCDSNVITPGTQFMAVLSAA 174
FRAA + E++A A +++S P E D NVITP T FM ++ A
Sbjct: 117 FRAADERLESDAISNAC------ADRIVSEYSLPRPRVRERWDHNVITPSTAFMERVALA 170
Query: 175 LQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLD 234
L+++I +LN+ W+ V+ SDA+VPGEGEHKIM YIR R+ PG+D NT H ++G+D
Sbjct: 171 LEWYIMKKLNEDAEWRHLTVVFSDAHVPGEGEHKIMQYIRGLRSQPGYDYNTTHVIHGMD 230
Query: 235 ADLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDD 294
ADLI L L+THE H ILR +T Q
Sbjct: 231 ADLICLGLSTHEKHVCILRNQLTETFQ--------------------------------- 257
Query: 295 TPIHKKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTL 354
P H ++ + N+ + R ++ D N + FER+VDDF+FLCFFVGNDFLPH+P +
Sbjct: 258 -PDH-NRFCYFNLQMYR--MKLMKDFANIE-GMQFERVVDDFIFLCFFVGNDFLPHVPLV 312
Query: 355 EIREGAINLLMHVYRREFTAMGGYLTDAGEV--------LLDRVEKFIQSVAVYEDQIFQ 406
I+ I LL+ Y R+F A+ GYLT GEV L++ K + + I +
Sbjct: 313 SIKTRGIELLLDHYVRDF-ALHGYLTHLGEVDYAHLHIFLMNFASKCMIKLTKEYYGIVR 371
Query: 407 KRTRIQQAYEYNEAMKLNAR-----------RESSEELLQAPVAVADTVK---------- 445
R R +Q E K A+ R +++E+ + + +V+
Sbjct: 372 ARERAKQHVE-ERITKTEAQVSEVLGTLLPDRSNAQEVSDVLLGLMSSVRKERTRLVVDK 430
Query: 446 --LG----EPGYKERYYADKF---EISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCS 496
LG + Y++ YY KF N + + +Y+ G+ WV RYY + S
Sbjct: 431 QPLGFSYLDKMYRDAYYQQKFGWDHSINRAAFENQIRLCCAEYLRGMQWVMRYYTKGCPS 490
Query: 497 WQWFYPYHYAPFASDLKDLS-DLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMT 555
W+W++PYHYAP DL + + + + P P +QL+ LP S ALPE+ +
Sbjct: 491 WEWYFPYHYAPLLQDLAAFTATVNVEMRMSAPLHPVEQLLAVLPRLSVHALPEELHEAVN 550
Query: 556 DPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSV 615
DP S + KFYP +D + F++QGV+++PFI+ + L R +KL + EE F ++
Sbjct: 551 DPKSLLGKFYPDMVDVDFSEANFSYQGVLRIPFINCEALSRACRKL---VELEEDFGST- 606
Query: 616 MLDLLYVHPQHPLYQQI 632
LY H L +Q+
Sbjct: 607 ---FLYCHESTLLAKQL 620
>gi|237842105|ref|XP_002370350.1| exoribonuclease, putative [Toxoplasma gondii ME49]
gi|211968014|gb|EEB03210.1| exoribonuclease, putative [Toxoplasma gondii ME49]
Length = 1239
Score = 348 bits (893), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 208/502 (41%), Positives = 267/502 (53%), Gaps = 60/502 (11%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQ----------------VDGEGVARPVDVSKPN- 43
MGVP FYRWL RYP ++DV E Q E A D + N
Sbjct: 1 MGVPTFYRWLCSRYPRVVIDVGENHVQEMREELRQKKEQQRQQAAKEKEATSTDGQENND 60
Query: 44 ----PNGMEFDNLYLDMNGIIHPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLL 99
+D LYLDMNGIIHPC H D P + +++F SIF Y+D I ++RPR+LL
Sbjct: 61 AETTEEDFAYDCLYLDMNGIIHPCCHTDDGSCPATEEEMFLSIFQYVDRIVDIIRPRQLL 120
Query: 100 YLAIDGVAPRAKMNQQRTRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSN 159
YLAIDGVAPRAKMNQQR+RRF+AAKD E E LR +FE G+ + K+ DSN
Sbjct: 121 YLAIDGVAPRAKMNQQRSRRFKAAKDIQEEEKAYAELRAQFESEGREVPPKKM--RWDSN 178
Query: 160 VITPGTQFMAVLSAALQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNL 219
VITPGT FM L+ AL Y+IQ RL W+ +VI SDA VPGEGEHKIM +IR QR
Sbjct: 179 VITPGTPFMHRLADALTYYIQDRLATNENWKGLRVIFSDATVPGEGEHKIMDFIRQQRKS 238
Query: 220 PGFDPNTRHCLYGLDADLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECH 279
F PN RH L+G DADLIML LATHE +FSILRE + ++ C CG VGH A C
Sbjct: 239 GEFCPNLRHVLHGADADLIMLGLATHEANFSILREAVVDRTPEQVCSACGAVGHSAENCP 298
Query: 280 GK-----PGDNP-----------------------ADW-NGVDDTPIHKKKYQFLNIWVL 310
P D DW G++ K Q L + VL
Sbjct: 299 ASSSVQAPDDRAFRVFEQDKRGLKRHLEARGVELREDWATGLESHRRAWKPLQMLQLPVL 358
Query: 311 REYLQYE-LDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHVY- 368
REYL YE + + ER +DDFVFLCF GNDFLPH+P I+ G+I+ L+ +Y
Sbjct: 359 REYLAYEFITSQEEGQSFDLERCIDDFVFLCFLCGNDFLPHLPHQSIQRGSIDALVQLYL 418
Query: 369 RREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYEYNEAMKLNARRE 428
+ + YLT G V L + F+ +A+ E ++ +++ + M+ ++
Sbjct: 419 QLRPQVLTDYLTREGRVNLPELYTFLHHLAIVEKEV------VRRDLQRKSRMRERTEQQ 472
Query: 429 SSEELLQAPVAVADTVKLGEPG 450
+ELL A A A+ ++ G
Sbjct: 473 KQQELLSAAKAAAERIRTANKG 494
Score = 165 bits (417), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 91/227 (40%), Positives = 119/227 (52%), Gaps = 44/227 (19%)
Query: 451 YKERYYADKFEI---SNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAP 507
++++YY KF + S+ ++++++ DV L Y+ GL WV YYYQ S+ WF+P+HYAP
Sbjct: 677 WRQKYYRQKFHLPAESDRKDVEQLASDVALAYIVGLQWVLLYYYQGCNSFDWFFPFHYAP 736
Query: 508 FASDLKDL-----------------------------------------SDLEITFFLGE 526
A DL D + EI+F LG
Sbjct: 737 LAVDLADELQRRLKLDDQKEERERRGSALGSVQGLPRCGHSRGVSLGQDGNFEISFTLGT 796
Query: 527 PFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKL 586
PFR F+QLM LP S+S LP ++ +M +P S I FYP D ++D NGKR WQ VV L
Sbjct: 797 PFRAFEQLMAVLPPYSASCLPREHAAVMMNPRSAIADFYPSDVKMDPNGKRHQWQWVVLL 856
Query: 587 PFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVHPQHPLYQQIT 633
PFIDE LLR K LE FLT EE RN D LYVH HPL + +
Sbjct: 857 PFIDENRLLRTCKPLEKFLTLEERERNRRGSDRLYVHRSHPLARTLA 903
>gi|221502801|gb|EEE28515.1| 5'->3' exoribonuclease, putative [Toxoplasma gondii VEG]
Length = 1239
Score = 348 bits (893), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 208/502 (41%), Positives = 268/502 (53%), Gaps = 60/502 (11%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQ----------------VDGEGVARPVDVSKPN- 43
MGVP FYRWL RYP ++DV E Q E A D + N
Sbjct: 1 MGVPTFYRWLCSRYPRVVIDVGENHVQEMREELRQKKEQQRQQAAKEKEATSTDGQENND 60
Query: 44 ----PNGMEFDNLYLDMNGIIHPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLL 99
+D LYLDMNGIIHPC H D P + +++F SIF Y+D I ++RPR+LL
Sbjct: 61 AETTEEDFAYDCLYLDMNGIIHPCCHTDDGSCPATEEEMFLSIFQYVDRIVDIIRPRQLL 120
Query: 100 YLAIDGVAPRAKMNQQRTRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSN 159
YLAIDGVAPRAKMNQQR+RRF+AAKD E E LR +FE G+ + K+ DSN
Sbjct: 121 YLAIDGVAPRAKMNQQRSRRFKAAKDIQEEEKAYAELRAQFESEGREVPPKKM--RWDSN 178
Query: 160 VITPGTQFMAVLSAALQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNL 219
VITPGT FM L+ AL Y+IQ RL W+ +VI SDA VPGEGEHKIM +IR QR
Sbjct: 179 VITPGTPFMHRLADALTYYIQDRLATNENWKGLRVIFSDATVPGEGEHKIMDFIRQQRKS 238
Query: 220 PGFDPNTRHCLYGLDADLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECH 279
F PN RH L+G DADLIML LATHE +FSILRE + ++ C CG VGH A C
Sbjct: 239 GEFCPNLRHVLHGADADLIMLGLATHEANFSILREAVVDRTPEQVCSACGAVGHSAENCP 298
Query: 280 GK-----PGDNP-----------------------ADWN-GVDDTPIHKKKYQFLNIWVL 310
P D DW+ G++ K Q L + VL
Sbjct: 299 ASSSVQAPDDRAFRVFEQDKRGLKRHLEARGVELREDWDTGLESHRRAWKPLQMLQLPVL 358
Query: 311 REYLQYE-LDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHVY- 368
REYL YE + + ER +DDFVFLCF GNDFLPH+P I+ G+I+ L+ +Y
Sbjct: 359 REYLAYEFITSQEEGQSFDLERCIDDFVFLCFLCGNDFLPHLPHQSIQRGSIDALVQLYL 418
Query: 369 RREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYEYNEAMKLNARRE 428
+ + YLT G V L + F+ +A+ E ++ +++ + M+ ++
Sbjct: 419 QLRPQVLTDYLTREGRVNLPELYTFLHHLAIVEKEV------VRRDLQRKSRMRERTEQQ 472
Query: 429 SSEELLQAPVAVADTVKLGEPG 450
+ELL A A A+ ++ G
Sbjct: 473 KQQELLSAAKAAAERIRTANKG 494
Score = 165 bits (417), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 91/227 (40%), Positives = 119/227 (52%), Gaps = 44/227 (19%)
Query: 451 YKERYYADKFEI---SNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAP 507
++++YY KF + S+ ++++++ DV L Y+ GL WV YYYQ S+ WF+P+HYAP
Sbjct: 677 WRQKYYRQKFHLPAESDRKDVEQLASDVALAYIVGLQWVLLYYYQGCNSFDWFFPFHYAP 736
Query: 508 FASDLKDL-----------------------------------------SDLEITFFLGE 526
A DL D + EI+F LG
Sbjct: 737 LAVDLADELQRRLKLDDQKEERERRGSALGSVQGLPRCGHSRGVSLGQDGNFEISFTLGT 796
Query: 527 PFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKL 586
PFR F+QLM LP S+S LP ++ +M +P S I FYP D ++D NGKR WQ VV L
Sbjct: 797 PFRAFEQLMAVLPPYSASCLPREHAAVMMNPRSAIADFYPSDVKMDPNGKRHQWQWVVLL 856
Query: 587 PFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVHPQHPLYQQIT 633
PFIDE LLR K LE FLT EE RN D LYVH HPL + +
Sbjct: 857 PFIDENRLLRTCKPLEKFLTLEERERNRRGSDRLYVHRSHPLARTLA 903
>gi|221482303|gb|EEE20658.1| 5'->3' exoribonuclease, putative [Toxoplasma gondii GT1]
Length = 1239
Score = 348 bits (892), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 208/502 (41%), Positives = 267/502 (53%), Gaps = 60/502 (11%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQ----------------VDGEGVARPVDVSKPN- 43
MGVP FYRWL RYP ++DV E Q E A D + N
Sbjct: 1 MGVPTFYRWLCSRYPRVVIDVGENHVQEMREELRQKKEQQRQQAAKEKEATSTDGQENND 60
Query: 44 ----PNGMEFDNLYLDMNGIIHPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLL 99
+D LYLDMNGIIHPC H D P + +++F SIF Y+D I ++RPR+LL
Sbjct: 61 AETTEEDFAYDCLYLDMNGIIHPCCHTDDGSCPATEEEMFLSIFQYVDRIVDIIRPRQLL 120
Query: 100 YLAIDGVAPRAKMNQQRTRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSN 159
YLAIDGVAPRAKMNQQR+RRF+AAKD E E LR +FE G+ + K+ DSN
Sbjct: 121 YLAIDGVAPRAKMNQQRSRRFKAAKDIQEEEKAYAELRAQFESEGREVPPKKM--RWDSN 178
Query: 160 VITPGTQFMAVLSAALQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNL 219
VITPGT FM L+ AL Y+IQ RL W+ +VI SDA VPGEGEHKIM +IR QR
Sbjct: 179 VITPGTPFMHRLADALTYYIQDRLATNENWKGLRVIFSDATVPGEGEHKIMDFIRQQRKS 238
Query: 220 PGFDPNTRHCLYGLDADLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECH 279
F PN RH L+G DADLIML LATHE +FSILRE + ++ C CG VGH A C
Sbjct: 239 GEFCPNLRHVLHGADADLIMLGLATHEANFSILREAVVDRTPEQVCSACGAVGHSAENCP 298
Query: 280 GK-----PGDNP-----------------------ADW-NGVDDTPIHKKKYQFLNIWVL 310
P D DW G++ K Q L + VL
Sbjct: 299 ASSSVQAPDDRAFRVFEQDKRGLKRHLEARGVELREDWATGLESHRRAWKPLQMLQLPVL 358
Query: 311 REYLQYE-LDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHVY- 368
REYL YE + + ER +DDFVFLCF GNDFLPH+P I+ G+I+ L+ +Y
Sbjct: 359 REYLAYEFITSQEEGQSFDLERCIDDFVFLCFLCGNDFLPHLPHQSIQRGSIDALVQLYL 418
Query: 369 RREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYEYNEAMKLNARRE 428
+ + YLT G V L + F+ +A+ E ++ +++ + M+ ++
Sbjct: 419 QLRPQVLTDYLTREGRVNLPELYTFLHHLAIVEKEV------VRRDLQRKSRMRERTEQQ 472
Query: 429 SSEELLQAPVAVADTVKLGEPG 450
+ELL A A A+ ++ G
Sbjct: 473 KQQELLSAAKAAAERIRTANKG 494
Score = 165 bits (417), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 91/227 (40%), Positives = 119/227 (52%), Gaps = 44/227 (19%)
Query: 451 YKERYYADKFEI---SNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAP 507
++++YY KF + S+ ++++++ DV L Y+ GL WV YYYQ S+ WF+P+HYAP
Sbjct: 677 WRQKYYRQKFHLPAESDRKDVEQLASDVALAYIVGLQWVLLYYYQGCNSFDWFFPFHYAP 736
Query: 508 FASDLKDL-----------------------------------------SDLEITFFLGE 526
A DL D + EI+F LG
Sbjct: 737 LAVDLADELQRRLKLDDQKEERERRGSALGSVQGLPRCGHSRGVSLGQDGNFEISFTLGT 796
Query: 527 PFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKL 586
PFR F+QLM LP S+S LP ++ +M +P S I FYP D ++D NGKR WQ VV L
Sbjct: 797 PFRAFEQLMAVLPPYSASCLPREHAAVMMNPRSAIADFYPSDVKMDPNGKRHQWQWVVLL 856
Query: 587 PFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVHPQHPLYQQIT 633
PFIDE LLR K LE FLT EE RN D LYVH HPL + +
Sbjct: 857 PFIDENRLLRTCKPLEKFLTLEERERNRRGSDRLYVHRSHPLARTLA 903
>gi|406701694|gb|EKD04809.1| strand exchange protein (5'-3' exoribonuclease) [Trichosporon
asahii var. asahii CBS 8904]
Length = 1632
Score = 347 bits (890), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 182/381 (47%), Positives = 257/381 (67%), Gaps = 15/381 (3%)
Query: 56 MNGIIHPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQ 115
MNGI+HPC HP+G+ AP + D+ +F Y + + + RPRK+L++AIDGVAPRAKMNQQ
Sbjct: 1 MNGIVHPCTHPEGRDAPPTEQDMMVEVFKYTERVVNMARPRKVLFMAIDGVAPRAKMNQQ 60
Query: 116 RTRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEK-PETCDSNVITPGTQFMAVLSAA 174
R+RRFRA+++AAE E E ++ FE G+ +S + K ++ DSN ITPGT FM +LSA+
Sbjct: 61 RSRRFRASQEAAEKEEERKQQIAMFEAMGQTVSDETKNKKSWDSNAITPGTPFMDLLSAS 120
Query: 175 LQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLD 234
L+Y++ +L+ PGW+ VI+SDA+VPGEGEHKI+ +IR +R P +DPNT H +YGLD
Sbjct: 121 LKYWVSHKLSTDPGWK--DVIISDASVPGEGEHKIVDWIRRERTYPEWDPNTSHAIYGLD 178
Query: 235 ADLIMLSLATHEIHFSILREVITLPGQQ--EKCFVCGQVGHLAAECHGKPGDNPADWNGV 292
ADLIML+LATHE +F +LRE + + C CG+ GH+ A C G+ D N V
Sbjct: 179 ADLIMLALATHEPNFRVLREDVFAQSSRGPRVCDNCGKEGHIKANCKGE--KKMPDPNVV 236
Query: 293 DDT-PIHKKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHM 351
P K + +L++ LR+YL EL++P FP + E +DD++F+ FFVGNDFLPH+
Sbjct: 237 AKAKPEDPKPFIWLDVACLRDYLAVELNVPT-SFPFDQELAIDDWIFMIFFVGNDFLPHL 295
Query: 352 PTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRI 411
P+LEIREGAI+ L+ +++RE MGGYLT+ G+V L R + + +A ED IFQ+R
Sbjct: 296 PSLEIREGAIDTLLEIWKRELDRMGGYLTNHGKVNLGRAQIILDGIAAREDNIFQQRK-- 353
Query: 412 QQAYEYNEAMKLNARRESSEE 432
E + + NA+R E+
Sbjct: 354 ----EQEDRQERNAKRRRKED 370
Score = 196 bits (499), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 111/262 (42%), Positives = 150/262 (57%), Gaps = 13/262 (4%)
Query: 438 VAVADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSW 497
V DTV+L EPGY+ERYY KF + ++ K ++ Y+EGLCWV YYYQ V +W
Sbjct: 572 VEYEDTVRLWEPGYRERYYRQKFGVELSDK--KFMSEITRSYMEGLCWVLEYYYQGVPAW 629
Query: 498 QWFYPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDP 557
W+YPYHYAPFA D D+ L+I F G PF PF QL+G PAAS LPE + LM +
Sbjct: 630 DWYYPYHYAPFAQDFHDVGSLDIKFRKGNPFTPFGQLLGVFPAASRIHLPEPLQTLMIEE 689
Query: 558 SSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVML 617
SPI FYP DF+IDMNGK+ AWQGV LPFID+ LL K E L+++E RN+
Sbjct: 690 DSPIIDFYPSDFEIDMNGKKMAWQGVALLPFIDQHRLLAALKSKEPELSQDEKRRNTWGE 749
Query: 618 DLLYVHPQHPLYQQITLYCQLYHQLPPQDRFAW---EIDVNASGGMNGYIW---LC-ERN 670
++V ++ L+ + +LY + P D +D S G+ G LC
Sbjct: 750 PRMFVAEENMLFDP---FVKLYGRKPRPDGKPLPPVALDAERSQGVVGGTLNDPLCVPGA 806
Query: 671 GLRSIIPSPVKGLPDIERNQAM 692
+ + +PS + PD+ N+A+
Sbjct: 807 SMDTPLPS-IDDCPDLTNNRAI 827
>gi|238593916|ref|XP_002393329.1| hypothetical protein MPER_06950 [Moniliophthora perniciosa FA553]
gi|215460659|gb|EEB94259.1| hypothetical protein MPER_06950 [Moniliophthora perniciosa FA553]
Length = 332
Score = 347 bits (889), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 168/321 (52%), Positives = 225/321 (70%), Gaps = 4/321 (1%)
Query: 92 LVRPRKLLYLAIDGVAPRAKMNQQRTRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKE 151
+VRPRKLL++AIDGVAPRAKMNQQR+RRFRAA++A E E + +EE GK +S E
Sbjct: 1 MVRPRKLLFMAIDGVAPRAKMNQQRSRRFRAAQEAKEKEEARLESVRLWEEMGKTISEDE 60
Query: 152 KPETC-DSNVITPGTQFMAVLSAALQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIM 210
K + DSN ITPGT FM +L+A+L+Y++ ++N PGW+ +VI+SDA+VPGEGEHKIM
Sbjct: 61 KNKKAWDSNAITPGTPFMTLLAASLRYWVVQKMNSDPGWKNLQVIISDASVPGEGEHKIM 120
Query: 211 SYIRLQRNLPGFDPNTRHCLYGLDADLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQ 270
YIR QR PG DPNTRH +YGLDADLIML+LATHE +F +LRE + C +CGQ
Sbjct: 121 DYIRRQRTNPGHDPNTRHVIYGLDADLIMLALATHEPYFRVLREDVFSDSSNMACRMCGQ 180
Query: 271 VGHLAAECHGKPGDNPADWNGVDDTPIHKKKYQFLNIWVLREYLQYELDIPNPPFPINFE 330
GH AA+C P + +K + FL++ +LREYL+ EL++P PFP N E
Sbjct: 181 EGHYAAQCTATPAEVQ---ERAKKKVTERKPFIFLDVSILREYLEAELNVPQTPFPFNLE 237
Query: 331 RIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRV 390
+ +DD+V L FFVGN FLPH+P+LEIREGAI+ L+ +++ E MGGYLT+ G + L R
Sbjct: 238 QAIDDWVLLIFFVGNAFLPHLPSLEIREGAIDTLLRIWKMELPRMGGYLTNHGRLELARA 297
Query: 391 EKFIQSVAVYEDQIFQKRTRI 411
+ ++ +A ED IF++R +
Sbjct: 298 QIILEGLAKREDDIFKRRREV 318
>gi|358342156|dbj|GAA49686.1| 5'-3' exoribonuclease 2 [Clonorchis sinensis]
Length = 314
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 171/290 (58%), Positives = 210/290 (72%), Gaps = 3/290 (1%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEE-DPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGI 59
MGVPAF+RWL+ +YP + VE+ P +D +G PVD ++PNPNG EFDNLYLDMNGI
Sbjct: 1 MGVPAFFRWLSMKYPSIVSHCVEKRGPILDNQGTRGPVDTTEPNPNGQEFDNLYLDMNGI 60
Query: 60 IHPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRR 119
IHPC HP+ KPAP + ++F +IF+YID +F ++RPR++LY+AIDGVAPRAKMNQQR+RR
Sbjct: 61 IHPCTHPESKPAPKNEAEMFVAIFEYIDRLFAIIRPRRILYMAIDGVAPRAKMNQQRSRR 120
Query: 120 FRAAKDAAEAEAEEERLRKEFEEAGKLL-SAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
FRAAK+A E ERLR E + G L AK + E DSN ITPGT FMA L+ AL+Y+
Sbjct: 121 FRAAKEAKEKHMTIERLRNELQARGAHLPPAKSEEEHFDSNCITPGTPFMARLAVALRYY 180
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
I RLN PGW+ V LSDANVPGEGEHKIM +IR QR+ P D NTRHCL G DADLI
Sbjct: 181 IYDRLNSDPGWKNIMVFLSDANVPGEGEHKIMDFIRRQRSAPDHDANTRHCLCGADADLI 240
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPAD 288
ML LATHE +F+I+RE P Q + C +CGQ+GH +C G P + D
Sbjct: 241 MLGLATHEPYFTIIREEFK-PNQPKPCDLCGQIGHEMEDCVGAPKEEEVD 289
>gi|71665066|ref|XP_819507.1| 5'-3' exonuclease XRND [Trypanosoma cruzi strain CL Brener]
gi|70884811|gb|EAN97656.1| 5'-3' exonuclease XRND, putative [Trypanosoma cruzi]
Length = 807
Score = 342 bits (878), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 220/641 (34%), Positives = 326/641 (50%), Gaps = 87/641 (13%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEE--DPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNG 58
MG+ FY WL Y + DV EE +DG+ + D ++ FDN YLDMNG
Sbjct: 1 MGIAGFYLWLQRWYGDCVEDVPEEVVKAALDGQPLPASSDTTQ------RFDNFYLDMNG 54
Query: 59 IIHPCFHPDGKPAPTSYDDVFKS-IFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRT 117
+IHPC H ++ IF +D ++ +VRPRK L L IDGVAP++KMNQQR+
Sbjct: 55 LIHPCCHDTAPLPEPESEEEMFERIFAQVDLLYKIVRPRKCLVLCIDGVAPQSKMNQQRS 114
Query: 118 RRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQY 177
RRFRAA++ E+E + ++ + G L + D NVITP T FM + A+++
Sbjct: 115 RRFRAAEERIESEVFSAQCAEDVVKKG--LPLPQTRSRWDHNVITPSTPFMERVGLAIEW 172
Query: 178 FIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADL 237
FI ++N+ P W+ VI SDA+VPGEGEHKIM YIR R G++P T H ++G+DADL
Sbjct: 173 FIMKKINEDPAWRHIAVIFSDAHVPGEGEHKIMHYIRELRAQLGYNPQTSHVIHGMDADL 232
Query: 238 IMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPI 297
I L L+THE H +ILR +T Q P
Sbjct: 233 ICLGLSTHEEHVTILRNQLTETFQ----------------------------------PD 258
Query: 298 HKKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIR 357
H ++ + +++ R L+ D ++FER++DDF+FLCFFVGNDFLPH+P + I+
Sbjct: 259 H-NRFCYFSLYKYRLRLR---DDFGGIGQMDFERVLDDFIFLCFFVGNDFLPHVPLISIK 314
Query: 358 EGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAV-YEDQIFQKRTRIQQAYE 416
I LL+ Y R F YLT GEV + KF++ V Y +++ Q+ + +A +
Sbjct: 315 TKGIELLLDHYVRGFKDH-SYLTHGGEVNYGNLAKFLRFFLVGYMEKLKQEYGGVLRAKQ 373
Query: 417 YNEAM-----------------KLNARRESSEELLQAPVA------------VADTVKLG 447
+A L R++++++ A V D LG
Sbjct: 374 RAKAKVEERVKELERELEEQLNSLQKDRKNAQQVSNAAHKLLLSIMRERARLVVDKEPLG 433
Query: 448 ----EPGYKERYYADKF--EISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFY 501
++++YY KF + ++ E +K + +Y+ G WV RYY SW W+Y
Sbjct: 434 FSYVNDDHRDKYYEKKFGWDPADREAFEKKIQLCCAEYLRGTQWVMRYYTTGCPSWDWYY 493
Query: 502 PYHYAPFASDLKDL-SDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSP 560
P++YAP DL +++ LG P P QL+ LP S ALPE+ + + DP S
Sbjct: 494 PFYYAPLLQDLAHFPGKVKVKMTLGAPRHPVLQLLAVLPRLSVEALPEELHDAVKDPESV 553
Query: 561 IYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKL 601
+ FYP +D + F++QGV++LPF++ L +KL
Sbjct: 554 LGVFYPEKVDVDFSEAHFSYQGVLRLPFVNNSHLQSACQKL 594
>gi|407409729|gb|EKF32447.1| 5'-3' exonuclease XRNA, putative [Trypanosoma cruzi marinkellei]
Length = 807
Score = 341 bits (874), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 221/639 (34%), Positives = 320/639 (50%), Gaps = 83/639 (12%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MG+ FY WL Y + DV EE + G PV + FDN YLDMNG+I
Sbjct: 1 MGIAGFYLWLQRWYGDCVEDVPEEVVKAALNGQPLPVS----SDATQRFDNFYLDMNGLI 56
Query: 61 HPCFHPDGKPAPTSYDDVFKS-IFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRR 119
HPC H ++ IF +D ++ +VRPRK L L IDGVAP++KMNQQR+RR
Sbjct: 57 HPCCHDTAPLPEPETEEEMFERIFAQVDLLYKIVRPRKCLVLCIDGVAPQSKMNQQRSRR 116
Query: 120 FRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFI 179
FRAA++ E E + ++ + G L + D NVITP T FM + A+++FI
Sbjct: 117 FRAAEERIEGEVFSAQCAEDVVKKG--LPPPQTRSRWDHNVITPSTPFMERVGLAIEWFI 174
Query: 180 QARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIM 239
++N+ P W+ VI SDA+VPGEGEHKIM YIR R G++P T H ++G+DADLI
Sbjct: 175 MKKINEDPAWRHIAVIFSDAHVPGEGEHKIMHYIRELRVQLGYNPQTSHVIHGMDADLIC 234
Query: 240 LSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIHK 299
L L+THE H +ILR +T Q P H
Sbjct: 235 LGLSTHEEHVTILRNQLTETFQ----------------------------------PDH- 259
Query: 300 KKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREG 359
++ + +++ R L+ D ++FER++DDFVFLCFFVGNDFLPH+P + I+
Sbjct: 260 NRFCYFSLYKYRLRLR---DDFGGIGQMDFERVLDDFVFLCFFVGNDFLPHVPLISIKTK 316
Query: 360 AINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAV-YEDQIFQKRTRIQQAYEYN 418
I LL+ Y R F YLT GEV + KF++ V Y +++ Q+ + +A +
Sbjct: 317 GIELLLDHYVRGFKDH-SYLTHGGEVNYGNLTKFLRFFVVGYMEKLKQEYGGVLRAKQRA 375
Query: 419 EAM-----------------KLNARRESSEELLQAPVA------------VADTVKLG-- 447
+A L R++++ + A V D LG
Sbjct: 376 KAKVEERVKELEQELEEQLNSLQKDRKNAQHVSNAAHKLLLSIMKERARLVVDKEPLGFS 435
Query: 448 --EPGYKERYYADKF--EISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPY 503
++++YY KF + ++ E +K + +Y+ G WV RYY SW W+YP+
Sbjct: 436 YVNDDHRDKYYEKKFGWDPADREAFEKKIQLCCAEYLRGTQWVMRYYTTGCPSWDWYYPF 495
Query: 504 HYAPFASDLKDL-SDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIY 562
+YAP DL + + LG P P QL+ LP S ALPE+ + + DP S +
Sbjct: 496 YYAPLLQDLAHFPGKVNVKMTLGAPRHPVLQLLAVLPRLSVEALPEELHDAVKDPDSVLG 555
Query: 563 KFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKL 601
FYP +D + F++QGV++LPF++ L +KL
Sbjct: 556 VFYPEKVDVDFSEAHFSYQGVLRLPFVNNSHLQSACQKL 594
>gi|209878396|ref|XP_002140639.1| XRN 5'-3' exonuclease domain-containing protein [Cryptosporidium
muris RN66]
gi|209556245|gb|EEA06290.1| XRN 5'-3' exonuclease domain-containing protein [Cryptosporidium
muris RN66]
Length = 1610
Score = 340 bits (873), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 239/726 (32%), Positives = 340/726 (46%), Gaps = 187/726 (25%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MG+ FYRW+++RYP + +V G G P+ FDNLYLD+NGI
Sbjct: 1 MGISRFYRWISERYP--------QINEVIGNG-DTPI-----------FDNLYLDVNGIA 40
Query: 61 HPCFHPDGKPAPTS--------YDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKM 112
H + + S +++ IF YI + V+P+K++Y+A+DGVAPRAKM
Sbjct: 41 HNSIYNNEMTVSYSGLNLSFGGSPEIWTGIFKYISRLVNTVKPKKVVYIAVDGVAPRAKM 100
Query: 113 NQQRTRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLS 172
NQQR+RRFR+A+DAA E R EF K T DSN ITPGT FM L+
Sbjct: 101 NQQRSRRFRSARDAALMEELAVR-NSEF---------ANKTNTFDSNCITPGTSFMYELN 150
Query: 173 AALQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYG 232
L++F+ ++ P W+ +VILS +++PGEGEHKIM YIR ++ P ++ NTRHCLYG
Sbjct: 151 RQLKFFVHYQIQNDPIWRNLEVILSGSDIPGEGEHKIMDYIRCIKSQPDYNNNTRHCLYG 210
Query: 233 LDADLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGV 292
LDADLIMLSLA+HE HFS+LRE I FV +V +
Sbjct: 211 LDADLIMLSLASHEPHFSLLREEIK--------FVPSKV--------------------L 242
Query: 293 DDTPIHKK-KYQFLNIWVLREYLQYELD-------------------------------- 319
D+ I K K+QFL+I +LREYL EL+
Sbjct: 243 DNRIIFTKDKFQFLHISILREYLVRELNPIYSVSKLDLNVRYMEEMGVQDIVSGCKDESI 302
Query: 320 ------IPNPPFPINF------ERIVDDFVFLCFFVGNDFLPHMPTLEIREGA------- 360
+ F IN ER++DDF+FL + VGNDFLPH+P + G
Sbjct: 303 TVTTPKLVQSSFNINLDFKMDEERLIDDFIFLGYIVGNDFLPHIPFHTVDNGLDRILCSY 362
Query: 361 INLLMHVYRREFTAMGGYLTDAGEVLL---------------DRVEKFIQSVAVYEDQI- 404
N L + F L D G + + +K + S + I
Sbjct: 363 RNYLASFQQTNFCKAPWLLEDCGRINFCNFLRFLVWHTRSEHEEAKKLLNSSDYWVSVIP 422
Query: 405 -FQKRTRIQQAYEYNEAMKLNARRESSEELLQAPVAVADT------VKLGEPGYKER--- 454
K I ++++++ ++ + + P + + VK+G + R
Sbjct: 423 NNSKSNDILGLPKFSKSLSIDKDNLRFQWQSKRPSTLEEMRWRYYFVKMGIDANQIRDNN 482
Query: 455 ----YYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFAS 510
+ E E + + +D+V Y+EGL W+ YY++ SW+WFY Y YAP+A
Sbjct: 483 IDLLGHTSISESKRDELVFETLEDLVFCYLEGLQWISYYYFRGTPSWRWFYSYRYAPYAC 542
Query: 511 DL------------------------------------KD---LSDLEITFFLGEPFRPF 531
D+ KD L+++ + LG P +PF
Sbjct: 543 DIAAILNHWLRLGKITRVNKSEMNLSMESDILNIEKMYKDGIHLNNMVFQYILGTPLQPF 602
Query: 532 DQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDE 591
+QLMG LP+ SS+ LPE +R L + SPI +YP F IDM G + W GV +PFIDE
Sbjct: 603 EQLMGVLPSRSSNLLPEPFRRLFMNKKSPIIDYYPSQFDIDMEGIKVPWGGVTLIPFIDE 662
Query: 592 KLLLRQ 597
+LLL+
Sbjct: 663 ELLLKS 668
>gi|300120088|emb|CBK19642.2| unnamed protein product [Blastocystis hominis]
Length = 574
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 203/553 (36%), Positives = 306/553 (55%), Gaps = 26/553 (4%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDP--QVDGEGVARPVDVSKPNPNGMEFDNLYLDMNG 58
MG+P + RWL +YPL + + + D Q DG ++ + + FDN Y+DMNG
Sbjct: 1 MGIPTYTRWLCRKYPLILKSLSDPDSPAQRDGNTSSQQQQQQQQQQPPV-FDNFYIDMNG 59
Query: 59 IIHPCFHPDG-KPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRT 117
IIH C H P + DDV +++ +Y+D + V PRKLL++++DGVAP+AK+ +QR
Sbjct: 60 IIHDCAHGQILGSTPRNTDDVLENLQNYLDRLITAVNPRKLLFMSVDGVAPKAKVKEQRG 119
Query: 118 RRFRAAKDAAEAEAEEERLRKEFEEAGKLLS---AKEKPETCDSNVITPGTQFMAVLSAA 174
RRFR+ ++ E + EE+L+KE G +E+ E+ +S I PGT FM+ L
Sbjct: 120 RRFRSGYESVEIKQLEEQLKKEMIAEGFQFPPDVEEEEEESFNSLNIFPGTDFMSELQVF 179
Query: 175 LQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLD 234
L Y++ L Q V++SD++VPGEGEHKIM +IR QR P + PN H ++GLD
Sbjct: 180 LDYYVTKTLQSNEKLQNLNVLISDSDVPGEGEHKIMEFIRSQRTQPDYLPNQTHIIHGLD 239
Query: 235 ADLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDD 294
ADL ML+L++HE F IL E + + +C +CG H EC P D
Sbjct: 240 ADLSMLALSSHEPLFYILVEQLFI----TRCAICGAPDHSTRECVKLPRKKLG--ASTKD 293
Query: 295 TPIHKKKYQFLNIWVLREYLQYELD--IPNPPFPINFERIVDDFVFLCFFVGNDFLPHMP 352
+ + Q ++I LR+YL E+ P N ERI+DD+VFLC FVGNDFLP +P
Sbjct: 294 DKFYHRPLQVISIKTLRDYLDLEMRPVASQMKIPYNLERIIDDYVFLCIFVGNDFLPSLP 353
Query: 353 TLEIREGAINLLMHVYRREFTAMGGYLTD-AGEVLLDRVEKFIQSVAVYEDQIFQKRTRI 411
+IREGA+ +L+++YRR Y+ GE+ +V+ ++ V E I +R R+
Sbjct: 354 LFDIREGAVTMLLNLYRRLLPTWTDYIIRPGGEINYLQVQSLMREVYANEGNIL-RRKRL 412
Query: 412 QQAYEYNEAMKLNARRESSEELLQAPVAVAD--TVKLGEPGYKERYYADKFEISNPEEID 469
Y +K A + SS + P + D +V G+PG+ + YY KF + +P +
Sbjct: 413 FGRYTVGR-LKRPAVQASSTK----PPELGDEESVDYGKPGWSDAYYRQKFGL-DPSDRV 466
Query: 470 KVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDLEITFFLGEPFR 529
+++ V +Y+ GL W+ RYY SW WFYP HYAP DL ++++ ++F LG+P
Sbjct: 467 SIER-VCQEYMLGLAWIMRYYCTGCASWDWFYPEHYAPLLRDLSAMNNVTVSFSLGQPIS 525
Query: 530 PFDQLMGTLPAAS 542
+ ++ A S
Sbjct: 526 KLEAVIAVGFACS 538
>gi|222622867|gb|EEE56999.1| hypothetical protein OsJ_06746 [Oryza sativa Japonica Group]
Length = 391
Score = 338 bits (868), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 184/396 (46%), Positives = 235/396 (59%), Gaps = 89/396 (22%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MG+P+FYRWL +RYP + P S+P + +DNLYLDMN II
Sbjct: 1 MGIPSFYRWLVNRYP----------------SIVSPAKESRPADGIVVYDNLYLDMNQII 44
Query: 61 HPCFHPDGK-------PAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMN 113
H FHP + APT+ +VF+S+FDY+D +F +VRPR+LLYLA+DGVAP AKMN
Sbjct: 45 HYSFHPQDQMNAGTDVCAPTTVSEVFESMFDYLDRLFRIVRPRRLLYLAVDGVAPCAKMN 104
Query: 114 QQRTRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPE-------TCDSNVITPGTQ 166
R R A D R RK G +L A E+ E D NVITPGT+
Sbjct: 105 GMRRGRPAEAID---------RSRKRHPCFGSILQASEEEEMQKISEGVSDPNVITPGTE 155
Query: 167 FMAVLSAALQYFIQARLNQI-PGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPN 225
FM +S AL Y+I+ARLN PGW+ VILSDANVPGEGEHKIMS+IR QR++ G+DPN
Sbjct: 156 FMEKISQALTYYIRARLNSSDPGWKHIMVILSDANVPGEGEHKIMSFIRAQRSMEGYDPN 215
Query: 226 TRHCLYGLDADLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDN 285
TRHCL+G DADLIML+LA+HE+HFSILRE
Sbjct: 216 TRHCLFGHDADLIMLALASHEVHFSILRE------------------------------- 244
Query: 286 PADWNGVDDTPIHKKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGN 345
FLNIWVLREYL+ EL I +P + ER++DDF+F+CF +GN
Sbjct: 245 ------------------FLNIWVLREYLEIELKILDPVCEPDIERLIDDFIFICFLMGN 286
Query: 346 DFLPHMPTLEIREGAINLLMHVYRREFTAMGGYLTD 381
DF+PH+P+LE++E A++LL+ VY+ F MGGY+ +
Sbjct: 287 DFIPHIPSLEMKEYALDLLIEVYKTTFNKMGGYIVN 322
>gi|300121215|emb|CBK21596.2| unnamed protein product [Blastocystis hominis]
Length = 938
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 231/636 (36%), Positives = 322/636 (50%), Gaps = 84/636 (13%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MG+P FYR+L +RYPL V+ V S+ P D LYLD+NGII
Sbjct: 1 MGIPKFYRYLLERYPL----------------VSEIVTSSEFLPRC---DYLYLDVNGII 41
Query: 61 HPCFHPDGKPAPTSYDDVFKS-IFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRR 119
H H + D+ S +F YI IF ++PRKL+++A+DGVAPRAK+NQQR+RR
Sbjct: 42 HNATHGESAIGEIPTTDMVASYVFGYISDIFANIQPRKLMFIAVDGVAPRAKLNQQRSRR 101
Query: 120 FRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFI 179
+R A D E E G K E DSN ITPGT+FM + ++YFI
Sbjct: 102 YRTALDRC----------LEVESTG------HKGEVFDSNCITPGTEFMHKVDQLIEYFI 145
Query: 180 QARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIM 239
+ ++++ P W+ T V+ S + PGEGEHKIM++IR P ++ RHC+YGLDADLI+
Sbjct: 146 RKKISEDPLWRNTMVLYSSHSDPGEGEHKIMNFIRYLCTSPDYNAAERHCIYGLDADLIL 205
Query: 240 LSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIHK 299
LSL+ H+++ +LR +I K + N A+ PIH
Sbjct: 206 LSLSLHDVNVILLRNIIDFRAYFRKV---------------QTTVNRAE-------PIH- 242
Query: 300 KKYQFLNIWVLREYLQYELDIPNPPFPI--NFERIVDDFVFLCFFVGNDFLPHMPTLEIR 357
K++ +I VLREYL +L N + + ER++DDFVF+ +GNDFLP +P+L+I
Sbjct: 243 -KWEIFHISVLREYLFRDLQPSNASWMSVKDRERLIDDFVFIMILLGNDFLPELPSLDIV 301
Query: 358 EGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQI------------- 404
G+I L+ +Y+ +L D + L + +F Q ++ E+ +
Sbjct: 302 NGSIQDLIAIYKEVCLDRHKFLVDDAKPSLSLLRQFFQRLSETEEVMIALLHEPAPRPFG 361
Query: 405 ----FQKRTRIQQAYEYNEAMKLNARRESSEELLQAPVAVADTVKLGEPGYKERYYADKF 460
+ RT I+ N RR S+ AP A+T + K
Sbjct: 362 FALAMRNRTPIRSEPCLAACPSSNRRRISTRSSATAPPTTANTTISTSSISSCLVDSRKR 421
Query: 461 EISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDLEI 520
+ S E+ + DV Y EGL WV YYY+ V SW WFY YHYAP SDL
Sbjct: 422 DYSLENEV--ILDDVCRNYYEGLYWVLLYYYRGVRSWTWFYRYHYAPLPSDLARCDMKYS 479
Query: 521 TFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAW 580
+F LG P +PF Q + LP S S LP YR L++ SP+ FYP F IDMN K+ W
Sbjct: 480 SFSLGAPVKPFLQQLSCLPPQSQSILPASYRVLVS-AKSPVADFYPARFSIDMNNKKNPW 538
Query: 581 QGVVKLPFIDEKLLLRQTKKLEV--FLTEEELFRNS 614
+GV +PFID L + L+V LT +E RN+
Sbjct: 539 EGVNLIPFIDIDRLTAAMEALQVDAGLTLDEQKRNA 574
>gi|327408309|emb|CCA30120.1| GF20490, related [Neospora caninum Liverpool]
Length = 1253
Score = 337 bits (863), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 201/468 (42%), Positives = 251/468 (53%), Gaps = 66/468 (14%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVAR----------------PVDVSKPNP 44
MGVP FYRWL RYP ++DV + Q E + + D S P
Sbjct: 1 MGVPTFYRWLCSRYPRVVIDVGDNHVQDMREEIRQKRERERARQETKENEETSDRSAPAA 60
Query: 45 NGME------------FDNLYLDMNGIIHPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLL 92
E +D LYLDMNGIIHPC H D P + +++F SIF Y+D I +
Sbjct: 61 ENAEKTDQPDLEEEFGYDCLYLDMNGIIHPCCHTDDGSCPATEEEMFLSIFQYVDRIVDI 120
Query: 93 VRPRKLLYLAIDGVAPRAKMNQQRTRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEK 152
++PRKLLYLAIDGVAPRAKMNQQR+RRF+AAKD E E E L+ +FE G+ + K+
Sbjct: 121 IQPRKLLYLAIDGVAPRAKMNQQRSRRFKAAKDIQEEEKAYEELKAQFESEGREVPPKKI 180
Query: 153 PETCDSNVITPGTQFMAVLSAALQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSY 212
DSNVITPGT FM L+ A+ Y+IQ RL WQ KVI SDA VPGEGEHKIM +
Sbjct: 181 --RWDSNVITPGTPFMHRLAIAITYYIQDRLATRSSWQGLKVIFSDATVPGEGEHKIMDF 238
Query: 213 IRLQRNLPGFDPNTRHCLYGLDADLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVG 272
IR QR F PN RH L+G DADLIML LATHE +FSILRE + ++ C C VG
Sbjct: 239 IRQQRKSGEFRPNLRHVLHGADADLIMLGLATHEANFSILREAVVDRTPEQVCSTCNAVG 298
Query: 273 HLAAECH---------GKPGDNPA------------------------DW-NGVDDTPIH 298
H A C P + A DW G++
Sbjct: 299 HSAENCKGGFAAGAPAATPEEERAFQVLEQDKRGLKRHLEERGVELREDWAAGLESHRRA 358
Query: 299 KKKYQFLNIWVLREYLQYELDIPNPP-FPINFERIVDDFVFLCFFVGNDFLPHMPTLEIR 357
K Q L + VLREYL YE + ER +DDFVFLCF GNDFLPH+P I+
Sbjct: 359 WKPLQMLQLPVLREYLTYEFITQQAEGHSYDLERCIDDFVFLCFLCGNDFLPHLPHQSIQ 418
Query: 358 EGAINLLMHVY-RREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQI 404
G+I+ L+H+Y + YLT G V L ++ F+ +A+ E ++
Sbjct: 419 RGSIDALVHLYLHLRPQVLTDYLTHEGRVNLRQLYTFLHHLAIVEKEV 466
Score = 152 bits (384), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 96/256 (37%), Positives = 130/256 (50%), Gaps = 49/256 (19%)
Query: 451 YKERYYADKF---EISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAP 507
++++YY KF E S+ +++ + DV L Y+ GL WV YYYQ S+ WF+P+HYAP
Sbjct: 667 WRQKYYRQKFHLPEESDRRDVETLASDVALAYIVGLQWVLLYYYQGCNSFDWFFPFHYAP 726
Query: 508 FASDLKD----------------------------------------LSDLEITFFLGEP 527
A DL D + +I+F LG P
Sbjct: 727 LAVDLADELQRRLKLDASKEETQRRDSSIGNARAAHSLKCTTSRGVSIEGKQISFTLGMP 786
Query: 528 FRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLP 587
FR F+QLM LP S+S LP ++ +MT+P S I FYP D ++D N + WQ VV LP
Sbjct: 787 FRAFEQLMAVLPPYSASCLPREHAAVMTNPRSAIADFYPADVKMDPNHQ---WQWVVLLP 843
Query: 588 FIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVHPQHPLYQQITLYCQLYHQ-LPPQD 646
FIDE LLR K LE FLT EE RN D L+VH HPL + + + + Q + D
Sbjct: 844 FIDENRLLRVCKPLEQFLTLEERERNRRGSDRLFVHRSHPLAETLAGVTREHGQGVTVHD 903
Query: 647 RFAWEIDVNASGGMNG 662
A E+D A+ G +G
Sbjct: 904 EKAEELD--AAEGYSG 917
>gi|84995660|ref|XP_952552.1| 5'-3' exoribonuclease 2 [Theileria annulata strain Ankara]
gi|65302713|emb|CAI74820.1| 5'-3' exoribonuclease 2, putative [Theileria annulata]
Length = 1467
Score = 336 bits (861), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 244/717 (34%), Positives = 345/717 (48%), Gaps = 147/717 (20%)
Query: 1 MGVPAFYRWLADRYPL--SIVDVVEEDPQVDGEGVARP---------VDVSKPNPNGMEF 49
MG+P+F+RWLA+RYPL DV D + P ++++ P+G F
Sbjct: 1 MGIPSFFRWLAERYPLICESQDVSTADKGDAFMLLKNPESFRDKFENLNLNLTPPDG--F 58
Query: 50 DNLYLDMNGIIHPCFHP--DGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVA 107
DNLYLD+NGI+H C H D T DD+F SIF I +I +VRP+KLLYLA+DGVA
Sbjct: 59 DNLYLDVNGIVHNCSHSVVDLCQNITCEDDIFVSIFQCIINIVNIVRPKKLLYLAVDGVA 118
Query: 108 PRAKMNQQRTRRFRAAKDAAEAEAEEERLRK-EFEEAGKLLSAKEKPETCDSNVITPGTQ 166
PRAK+ QQR RRFRAA ++ + + + L+ E E L+ KE+ D ITPGT
Sbjct: 119 PRAKIIQQRERRFRAAMESTQQQIILDSLKDMENGEESADLNEKEEEFKFDPIQITPGTA 178
Query: 167 FMAVLSAALQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFD--- 223
FM L++ LQ+F +N+ W+ K+++S ++VPGEGEHKIM YIR + + +
Sbjct: 179 FMERLTSRLQFFALKMINENQQWRNLKIVVSGSDVPGEGEHKIMEYIRNDKAIRHAEYEK 238
Query: 224 ------------PNTRHCLYGLDADLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQV 271
P HC+YGLDADLI+LSLATHE + +LRE +
Sbjct: 239 MIRNGNKEKKGVPYVSHCVYGLDADLIVLSLATHEPYICLLREQVVF------------- 285
Query: 272 GHLAAECHGKPGDNPADWNGVDDTPIHKKKYQFLNIWVLREYLQYEL--DIPNPPFPINF 329
GH+ + ++ Y L+I +LREYL +L D+
Sbjct: 286 GHMKNSSKMR-------------MMVNMNNYILLHIGILREYLVADLVEDLRLRSDLNVM 332
Query: 330 ERIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHVYRREFT-AMGG----------- 377
+R+VDDFVFL FVGNDFLPH+ I EG N ++ +YR ++GG
Sbjct: 333 DRVVDDFVFLTMFVGNDFLPHIHMANIPEGGFNHMLQIYREYLVESLGGKQNSYHSPIHN 392
Query: 378 ----------YLTDA-GEVLLDRVEKFIQSVAVYEDQIFQK--RTRIQQ----------- 413
+LT GEV D + F+ A YE++ Q T + +
Sbjct: 393 TNKINNSKDVWLTSGCGEVNFDNLILFMNKWARYENRTVQNYLTTEVVEKTNLKNQNNNN 452
Query: 414 -----AYEYNEAMKLNARRESSEELLQAPVAVADTVKL------------GEP----GYK 452
++ N + +N S+ V K+ EP Y+
Sbjct: 453 NTKVVSFNSNRVV-VNHSANVSKSKTSITVIDVKNCKIETDLSDFNAKYPNEPQTLVDYR 511
Query: 453 ERYYADKFEIS------NPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYA 506
RYY K IS N ++ V +DVV +Y+ G+ W+ YYY+ V SW W P Y
Sbjct: 512 NRYYLAKMGISNQLIKCNEGSVNSV-EDVVREYLHGVQWILYYYYRGVPSWNWHLPCKYP 570
Query: 507 PFASD----LKD------------------LSD-LEITFFLGEPFRPFDQLMGTLPAASS 543
PF +D LK+ LSD L I+F G+P PF+QLM LP S+
Sbjct: 571 PFVNDMLLFLKNTKRKLTMTDKAQFSYPLLLSDVLHISFVKGKPITPFEQLMLVLPPQSA 630
Query: 544 SALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKK 600
LP + L+TD SP++++YP F +DM+ W G+ +P + LLL+Q K
Sbjct: 631 HFLPSVFSRLITDQESPLHQYYPLHFDVDMDNTNVPWGGITLIPLVPYPLLLQQMNK 687
>gi|320586314|gb|EFW98993.1| RasGAP [Grosmannia clavigera kw1407]
Length = 3016
Score = 335 bits (859), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 185/425 (43%), Positives = 252/425 (59%), Gaps = 58/425 (13%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MG+PA +RWL+++YP I VVE+ PQ +G PVD S PNPNG EFDNLYLDMNGI+
Sbjct: 1 MGIPAAFRWLSNKYPKIISPVVEQQPQTMEDGTIIPVDTSGPNPNGEEFDNLYLDMNGIV 60
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ +PAP +++ IF Y D + +VRPRKLL +A+DGVAPRAKMNQQR+RRF
Sbjct: 61 HPCSHPEDRPAPKDEEEMMLEIFRYTDRVVNMVRPRKLLMIAVDGVAPRAKMNQQRSRRF 120
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETC-----DSNVITPGTQFMAVLSAAL 175
R+A++A E E +++ L K ++ + E ET DSN ITPGT FM +L+A+L
Sbjct: 121 RSAQEAQEKEEDKKELLKLLKQQNGGVLPTETLETAAKKAFDSNSITPGTPFMDILAASL 180
Query: 176 QYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDA 235
+Y+ H +YGLDA
Sbjct: 181 RYW-------------------------------------------------HVIYGLDA 191
Query: 236 DLIMLSLATHEIHFSILRE-VITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVD- 293
DLIMLSLATHE +F +LRE V + C +CGQ GH A+ C G+ + +++ D
Sbjct: 192 DLIMLSLATHEPYFRVLREDVFFQDSKARTCRLCGQKGHEASACKGEVKEKDGEFDEKDK 251
Query: 294 DTPIHKKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPT 353
+ P+ K + +L++ VLREYL ELD+P PF + ER +DD++FLC FVGNDFLPH+P
Sbjct: 252 EHPL--KPFIWLHVSVLREYLAVELDVPGLPFRWDLERAIDDWIFLCCFVGNDFLPHLPA 309
Query: 354 LEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQ 413
LEIRE IN L +++ M GY+T G V L+R + + +A ED IF++R + +
Sbjct: 310 LEIRENGINTLTGLWKDNLQYMNGYVTKDGHVDLERAQYIMSGLAKQEDGIFRRRKQQED 369
Query: 414 AYEYN 418
E N
Sbjct: 370 RREEN 374
Score = 185 bits (469), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 109/269 (40%), Positives = 150/269 (55%), Gaps = 19/269 (7%)
Query: 435 QAPVAVA------DTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCR 488
P AVA DTV++ + GY RYY KF + +P +++ + V YVEGL WV
Sbjct: 517 STPKAVASEEGPVDTVRMWDEGYANRYYEQKFHV-DPRDVE-FRHGVARSYVEGLAWVLL 574
Query: 489 YYYQDVCSWQWFYPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPE 548
YY+Q SW+W+YPYHYAPFA+D DL +++ F G RPF+QLM LPAAS A+PE
Sbjct: 575 YYFQGCPSWEWYYPYHYAPFAADFVDLGKMDLVFQKGRISRPFEQLMSVLPAASRHAIPE 634
Query: 549 KYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEE 608
+ +LMT+ S I FYP DF ID+NGK+FAWQGV LPFID K LL +K L+ E
Sbjct: 635 IFHDLMTNEDSEIIDFYPVDFDIDLNGKKFAWQGVALLPFIDMKRLLAAVEKKYPLLSPE 694
Query: 609 ELFRNSV-MLDLLYVHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVNASGGMNGYIWLC 667
+ RN V + +L LY +IT Y + Q ++++ S G+ G +
Sbjct: 695 DQVRNGVGKVVMLLSDANTELYDEIT--GHFYSK--RQGTTNFKLNPRISAGLAGMVEKM 750
Query: 668 E----RNGLRSIIPSPVKGLPDIERNQAM 692
E L + P PDIE ++++
Sbjct: 751 EDYIPHGSL--VYPLDRSAFPDIEYDRSL 777
>gi|409080083|gb|EKM80444.1| hypothetical protein AGABI1DRAFT_113625, partial [Agaricus bisporus
var. burnettii JB137-S8]
Length = 315
Score = 333 bits (855), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 165/320 (51%), Positives = 223/320 (69%), Gaps = 11/320 (3%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEED----PQVDGEGVARPVDVSKPNPNGMEFDNLYLDM 56
MGVPA +RWL+ +YP I V EE+ P +G+ V PV++ PNPNG+EFDNLYLDM
Sbjct: 1 MGVPALFRWLSKKYPKIIYPVEEEEESKIPDDNGDEVTVPVNMLLPNPNGVEFDNLYLDM 60
Query: 57 NGIIHPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQR 116
NGI+HPC HP+GKPAP + +++ +F Y D + ++RPRKLL++AIDGVAPRAKMNQQR
Sbjct: 61 NGIVHPCTHPEGKPAPETEEEMMVEVFKYTDRVVNMIRPRKLLFMAIDGVAPRAKMNQQR 120
Query: 117 TRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQ 176
+RRFR++ DA E E + K ++ GK ++ +E E DSN ITPGT FM +L+ +L+
Sbjct: 121 SRRFRSSHDAKEKEDARQESLKIWKAMGKEITEEEHKEAWDSNAITPGTPFMDLLATSLR 180
Query: 177 YFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDAD 236
Y++ ++N P W+ +V++SDA VPGEGEHKIM +IR QR+ PG DPNT+H +YGLDAD
Sbjct: 181 YWVVQKMNTDPAWKNIQVLISDAGVPGEGEHKIMDFIRRQRSNPGHDPNTQHVIYGLDAD 240
Query: 237 LIMLSLATHEIHFSILRE-VITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDT 295
LIML+LATHE +F +LRE V + C +CGQ GH AA+C G + T
Sbjct: 241 LIMLALATHEPNFRVLREDVFANDTKPTACRMCGQEGHYAAQCTGTKAEIEK------KT 294
Query: 296 PIHKKKYQFLNIWVLREYLQ 315
P KK + FL++ +LREYL+
Sbjct: 295 PPDKKPFIFLDVAILREYLE 314
>gi|426198151|gb|EKV48077.1| hypothetical protein AGABI2DRAFT_191725, partial [Agaricus bisporus
var. bisporus H97]
Length = 315
Score = 332 bits (850), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 165/320 (51%), Positives = 222/320 (69%), Gaps = 11/320 (3%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEED----PQVDGEGVARPVDVSKPNPNGMEFDNLYLDM 56
MGVPA +RWL+ +YP I V EE+ P +G V PV++ PNPNG+EFDNLYLDM
Sbjct: 1 MGVPALFRWLSKKYPKIIYPVEEEEESKIPDDNGVEVTVPVNMLLPNPNGVEFDNLYLDM 60
Query: 57 NGIIHPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQR 116
NGI+HPC HP+GKPAP + +++ +F Y D + ++RPRKLL++AIDGVAPRAKMNQQR
Sbjct: 61 NGIVHPCTHPEGKPAPETEEEMMVEVFKYTDRVVNMIRPRKLLFMAIDGVAPRAKMNQQR 120
Query: 117 TRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQ 176
+RRFR++ DA E E + K ++ GK ++ +E E DSN ITPGT FM +L+ +L+
Sbjct: 121 SRRFRSSHDAKEKEDARQESIKIWKAMGKEITEEEHKEAWDSNAITPGTPFMDLLATSLR 180
Query: 177 YFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDAD 236
Y++ ++N P W+ +V++SDA VPGEGEHKIM +IR QR+ PG DPNT+H +YGLDAD
Sbjct: 181 YWVVQKMNTDPAWKNIQVLISDAGVPGEGEHKIMDFIRRQRSNPGHDPNTQHVIYGLDAD 240
Query: 237 LIMLSLATHEIHFSILRE-VITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDT 295
LIML+LATHE +F +LRE V + C +CGQ GH AA+C G + T
Sbjct: 241 LIMLALATHEPNFRVLREDVFANDTKPTACRMCGQEGHYAAQCTGTKAEIEK------KT 294
Query: 296 PIHKKKYQFLNIWVLREYLQ 315
P KK + FL++ +LREYL+
Sbjct: 295 PPDKKPFIFLDVAILREYLE 314
>gi|156085645|ref|XP_001610232.1| 5'-3' exoribonuclease (XRN2) [Babesia bovis T2Bo]
gi|154797484|gb|EDO06664.1| 5'-3' exoribonuclease (XRN2), putative [Babesia bovis]
Length = 1388
Score = 331 bits (848), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 242/733 (33%), Positives = 347/733 (47%), Gaps = 153/733 (20%)
Query: 1 MGVPAFYRWLADRYPLSI----VDVVEEDPQVDGEGVARPVDVSKPN------PNGMEFD 50
MGVP F++WLA RYPL V E+D D + + ++ S P+G FD
Sbjct: 1 MGVPGFFKWLAQRYPLICETYRGSVAEKD---DAFRLLKSIERSDDQYETSSVPDG--FD 55
Query: 51 NLYLDMNGIIHPCFHP--DGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAP 108
NLYLD+NGIIH C H + +D+F IF YI+++ +VRPRKLLYLAIDGVAP
Sbjct: 56 NLYLDVNGIIHNCSHSIEELSQGLRCEEDIFVLIFQYINNLVKIVRPRKLLYLAIDGVAP 115
Query: 109 RAKMNQQRTRRFRAAKDAAEAEA------EEERLRKEFEEAGKLLSAKEKPETCDSNVIT 162
RAK+ QQR RRFR+A+D+ + E E + KE + ++ K P IT
Sbjct: 116 RAKIMQQRDRRFRSARDSNKNEVVFQTIQENNGIEKEPSDGDGDVNFKFDPIQ-----IT 170
Query: 163 PGTQFMAVLSAALQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRN---- 218
PGT FM LS L++F +++ W+ K+++S ++VPGEGEHKIM YIR ++
Sbjct: 171 PGTPFMERLSVRLRFFAHMMIHENKAWKNLKIVVSGSDVPGEGEHKIMEYIRNDKSNRHD 230
Query: 219 --LPGFDPN-TRHCLYGLDADLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLA 275
G P HC+YGLDADLIMLSLATHE + +LRE + +Q +
Sbjct: 231 AARAGGTPQYISHCIYGLDADLIMLSLATHEPYVCLLREQVYFFNKQTNSRMM------- 283
Query: 276 AECHGKPGDNPADWNGVDDTPIHKKKYQFLNIWVLREYLQYELDIPNPPF---PINFERI 332
++ Y FL+I +LREY+ +++ I +P P +R+
Sbjct: 284 ---------------------MNMNDYIFLHIGILREYILHDMVI-SPELRRQPRTIDRV 321
Query: 333 VDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHVYRREF-----TAMGGYL---TDAGE 384
VDDFV + F+GNDFLPH +I +G +N + +Y R ++ G++ T GE
Sbjct: 322 VDDFVLMSMFMGNDFLPHGKFAKITDGGLNTYITLYSRYLEERYRSSPNGHIWLVTGCGE 381
Query: 385 VLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYEYNEAMKLNARRESSEELLQAPVAVADTV 444
+ + F+ + E EA K N + +E + + VA+
Sbjct: 382 INCTNLLHFLNMLVKRESSRITDELHCGPDAGRGEA-KRNGKSGKTEITV---IDVANCC 437
Query: 445 KLGEPG---------------YKERYYADKFEISNPEEIDKVKK------------DVVL 477
+ +P ++ RYY K I++ + K K +VV
Sbjct: 438 IMTDPSEFRAKYEGKPKSFAEWRSRYYMAKMGIASDVIVHKSTKSSDTESSPCTIPEVVR 497
Query: 478 KYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLK------------------------ 513
Y+EG+ WV YYY+ V SW W+ YAP SD++
Sbjct: 498 DYLEGIQWVMYYYYRGVPSWNWYLRCKYAPLLSDVRFFIQRMKQSYDRGGNRPRDCPANA 557
Query: 514 -DLSD-LEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQI 571
LS +++ F + EP PF QLM +P A++ LP + NLMTD SP+ K+YP F I
Sbjct: 558 TTLSQVMQLKFEISEPVTPFQQLMMVMPPAAAHFLPTVFGNLMTDTESPLRKYYPEHFDI 617
Query: 572 DMNGKRFAWQGVVKLPFIDEKLLLR------QTKKLEVF---------------LTEEEL 610
DM+ W GV LP + LLLR +K E F LTE+E
Sbjct: 618 DMDDTNVQWGGVTLLPIVPPNLLLRLMNGALMSKGDEKFVVGPSGKLCYMESTKLTEDEK 677
Query: 611 FRNSVMLDLLYVH 623
RN + +Y H
Sbjct: 678 MRNCTGVARIYYH 690
>gi|403331887|gb|EJY64917.1| 5'-3' exonuclease [Oxytricha trifallax]
Length = 1130
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 188/446 (42%), Positives = 248/446 (55%), Gaps = 87/446 (19%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEE--------------------------DPQVDGEGVA 34
MGVPAF+RWL+ RYP ++ + + D +DGE
Sbjct: 1 MGVPAFFRWLSVRYPKVAINALSDEDLEHLYDDFKKTSDDNKDPNEINLLDGDLDGEIEK 60
Query: 35 RPVDVSKPNPNGMEFDNLYLDMNGIIHPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVR 94
R V + NP EFDNLYLDMNGIIHPC HP KP PTS ++F +IFDY D I +VR
Sbjct: 61 R---VRENNP---EFDNLYLDMNGIIHPCTHPQDKPQPTSETEMFNNIFDYTDKIMKIVR 114
Query: 95 PRKLLYLAIDGVAPRAKMNQQRTRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPE 154
P++L+Y+A+DGVAPRAKMNQQR+RRFR A D E E EE +R ++ + G S K+ E
Sbjct: 115 PQRLIYMAVDGVAPRAKMNQQRSRRFRGALDTEEREQREEEIRGKWSKEGIKFSQKKDEE 174
Query: 155 TCDS-----NVITPGTQFMAVLSAALQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKI 209
DS NVITPGT+FM LS ALQY++ RL W+ KVI SDA+ PGEGEHKI
Sbjct: 175 DGDSDKFDQNVITPGTEFMFRLSKALQYYVMERLQTDSLWKDIKVIFSDASNPGEGEHKI 234
Query: 210 MSYIRLQRNLPGFDPNTRHCLYGLDADLIMLSLATHEIHFSILREVITLPGQQEKCFVCG 269
+ +IR QR G++PNTRHC+YG DADLIML L+THE HF+ILRE + + + KC CG
Sbjct: 235 LDFIRSQRLQAGYNPNTRHCIYGADADLIMLGLSTHEPHFAILREAVLMDSDK-KCTYCG 293
Query: 270 QVGHLAAECHGKPGDNPADWNGVDDTPIHKKKYQFLNIWVLREYLQYELDIPNPPFPINF 329
Q GHL +EC P DI P +
Sbjct: 294 QNGHLNSECKSNP------------------------------------DIAGGP-KVQL 316
Query: 330 ERIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDR 389
R NDFLPH+P+L IREGA++ ++ +Y+ ++G YLT GE+ +
Sbjct: 317 SR------------SNDFLPHLPSLHIREGALDAILVIYKNLLPSLGDYLTKNGEIDFGK 364
Query: 390 VEKFIQSVAVYEDQIFQKRTRIQQAY 415
V+ +A E++ F+ + ++ Y
Sbjct: 365 VDIIFNDIAKIEEESFKMKKENEERY 390
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 98/239 (41%), Positives = 138/239 (57%), Gaps = 17/239 (7%)
Query: 396 SVAVYEDQIFQKRTRIQQAYEYNEAMKLNA-------RRESSEELLQAPVAVADTVKLGE 448
SV +E Q+ ++++Q + E KL + ++ SE+ Q + D VK G
Sbjct: 487 SVEEFEKSQIQELSKLKQELDEEELNKLASDKMKEIVKKMLSEKNKQMADSYIDKVKFGT 546
Query: 449 PGYKERYYADKFEISN---PEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHY 505
G+K RYY DKF I E DK+K+ Y+EGL WV YYY+ SW WFYPYHY
Sbjct: 547 EGWKLRYYQDKFHIDVNDFQEFTDKIKQ----AYIEGLQWVYSYYYKGCVSWYWFYPYHY 602
Query: 506 APFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFY 565
APFASDL + ++I F +G P +PF+QLMG +P S+ +P YR+L++ P S I FY
Sbjct: 603 APFASDLVNCDRVKIKFEMGVPAQPFEQLMGVMPKQSAHCIPPCYRHLLSSPKSEIIDFY 662
Query: 566 PPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLE---VFLTEEELFRNSVMLDLLY 621
P DF++D+NG R+AW GV LPFID + L++ +K + LT E RN +L+
Sbjct: 663 PIDFRLDINGARYAWMGVNLLPFIDRQRLIKAMRKADQDGAKLTPIEQDRNRTGTVMLF 721
>gi|358400793|gb|EHK50119.1| hypothetical protein TRIATDRAFT_280608 [Trichoderma atroviride IMI
206040]
Length = 454
Score = 327 bits (839), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 156/295 (52%), Positives = 205/295 (69%), Gaps = 8/295 (2%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MG+PA +RWL+++YP I V+E+ P V +G+ PVD ++PNPNG E DNLYLDMNGI+
Sbjct: 1 MGIPAAFRWLSNKYPKIISPVIEQTPIVTEDGITIPVDTTQPNPNGEELDNLYLDMNGIV 60
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ +PAP +++ +F Y D + +VRPRK+L +A+DGVAPRAKMNQQR+RRF
Sbjct: 61 HPCSHPEDRPAPADEEEMMLEVFKYTDRVVNMVRPRKILMIAVDGVAPRAKMNQQRSRRF 120
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETC-----DSNVITPGTQFMAVLSAAL 175
R+A++A E E +++ L + + A ET DSN ITPGT FM +L+ +L
Sbjct: 121 RSAQEAKEKEEDKQALIELLKRQNGGTFAAADSETVVKKAFDSNSITPGTPFMDILALSL 180
Query: 176 QYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDA 235
+Y+ Q +LN P W K+I+SDA VPGEGEHKIM+++R QR P +DPNTRH +YGLDA
Sbjct: 181 RYWCQYKLNTDPAWAKLKIIISDATVPGEGEHKIMNFVRSQRASPNYDPNTRHVIYGLDA 240
Query: 236 DLIMLSLATHEIHFSILRE-VITLPGQQEKCFVCGQVGHLAAECHG--KPGDNPA 287
DLIML LATHE HF +LRE V G+ C +CGQ GH A C G KP D+PA
Sbjct: 241 DLIMLGLATHEPHFRVLREDVFFQDGKNRACKLCGQKGHEANNCRGNAKPSDDPA 295
>gi|32766355|gb|AAH55175.1| Zgc:63635 protein [Danio rerio]
Length = 510
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 190/512 (37%), Positives = 274/512 (53%), Gaps = 78/512 (15%)
Query: 118 RRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQY 177
RRFR+AK+A EE+++K E+ G++L + + DSN ITPGT FMA L L+Y
Sbjct: 11 RRFRSAKEA------EEKIKKALEK-GEVLPTEAR---FDSNCITPGTDFMARLQEQLKY 60
Query: 178 FIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADL 237
F+ +L+ WQ V LS PGEGEHKIM +IR + PG +PNTRHCLYGLDADL
Sbjct: 61 FVHNKLSTDKTWQGVNVYLSGHETPGEGEHKIMEFIRSESTKPGHNPNTRHCLYGLDADL 120
Query: 238 IMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPI 297
IML L +HE HFS+LRE + G++ + + T
Sbjct: 121 IMLGLTSHEPHFSLLREEVRFGGKKSQKRI---------------------------TAP 153
Query: 298 HKKKYQFLNIWVLREYLQYELD--IPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLE 355
+ + L++ ++REY+ YE F + ERI+DD+V + F VGNDF+PH+P L
Sbjct: 154 EETTFHLLHLSLMREYIDYEFSELRKKISFEYDLERIIDDWVLMGFLVGNDFIPHLPHLH 213
Query: 356 IREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQK-------- 407
I A+ LL Y ++GGYL + G + L EK+++ ++ ++ + F +
Sbjct: 214 INHDALPLLYRTYINVLPSLGGYLNENGHLNLTHFEKYLEKLSDFDREHFSEVFVDLKWF 273
Query: 408 RTRIQQAY---------EYNEAMKLNARRESSEEL-LQAPVAVADTVKLG-------EPG 450
+++ Y E + + + S + L L A V D+ E G
Sbjct: 274 ESKVGNKYVNEAAGLAAEEADGRDMKKSKSSDDSLCLAALDGVRDSHSTAGRAEGAEEDG 333
Query: 451 ------------YKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQ 498
YK YY K + D+ + YVEG+ W+ YYY V SW
Sbjct: 334 EDDDMFETEFRQYKRTYYMTKMGVEVVS--DEFLANQAKCYVEGIQWILHYYYHGVQSWS 391
Query: 499 WFYPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPS 558
W+YPYHYAPF SD++++S L +TF L +PF PF+QL+ LP+AS LP+ Y++LMT S
Sbjct: 392 WYYPYHYAPFLSDVRNISGLSLTFDLAKPFMPFEQLLAVLPSASKDLLPQCYQHLMTSLS 451
Query: 559 SPIYKFYPPDFQIDMNGKRFAWQGVVKLPFID 590
SPI ++YP DF+ D+NGK+ W+ VV +PFID
Sbjct: 452 SPIVEYYPQDFKTDLNGKQQEWEAVVLIPFID 483
>gi|401828471|ref|XP_003887949.1| 5'-3' exonuclease [Encephalitozoon hellem ATCC 50504]
gi|392998957|gb|AFM98968.1| 5'-3' exonuclease [Encephalitozoon hellem ATCC 50504]
Length = 656
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 223/672 (33%), Positives = 321/672 (47%), Gaps = 99/672 (14%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP+ +RWL + +I +++E +P VD LYLD N II
Sbjct: 1 MGVPSLFRWLQLSHREAIHNILE-NPSVDC---------------------LYLDFNAII 38
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
H C P D++K++ D+ID+I L VRPRKLLY+AIDGVAPRAK++ QR RR+
Sbjct: 39 HTCIKPGLGSEEEIEKDLYKTVGDFIDYILLKVRPRKLLYIAIDGVAPRAKLSHQRARRY 98
Query: 121 RAAKDAAEAEAEEERLRKEFE-----------EAGKL--------------------LSA 149
++A E A + L+ +F E G+ L+
Sbjct: 99 KSALGKKEGSAIKPTLQTDFAVQPPKEGKDEGEDGEFTGESSLYDKFTAEDISESSSLAV 158
Query: 150 KEKPETCDSNVITPGTQFMAVLSAALQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKI 209
+ E D N ITPGT FM L + L +IQ +L+ PG ++I S VPGEGE KI
Sbjct: 159 DVEAEKFDLNCITPGTPFMERLHSVLISYIQYKLSSDPGASHLRIIYSSYLVPGEGEQKI 218
Query: 210 MSYIRLQRNLPGFDPNTRHCLYGLDADLIMLSLATHEIHFSILREVITLPGQQEK--CFV 267
MS+IR Q + N H +Y D DL+ L L+ H I+R+ + Q+K C
Sbjct: 219 MSFIRNQESAAR---NDVHMIYSPDGDLMFLGLSLHRSKVLIMRDYFSPNRAQKKKVCTK 275
Query: 268 CGQVGHLAAECHGKPGDNPADWNGVDDTPIHKKKYQFLNIWVLREYLQYELDIPNPPFPI 327
CG+ GH EC GV + ++NI LR L E
Sbjct: 276 CGRTGHSNEEC------------GV----FTNYHFVYVNISELRTRLIREFRRYTAQ-RF 318
Query: 328 NFERIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLL 387
+ ERI++D++FLCF +GNDF+P +P L+IR +I + + + F+ Y+T +
Sbjct: 319 SEERILNDWIFLCFLLGNDFVPSIPCLDIRFHSIETITEIMMKNFSETKSYITCNSAIDY 378
Query: 388 DRVEKFIQSVAVYEDQIFQKRTRIQQAYEYNEAMKLNARRESSEELLQAPVAVADTVKLG 447
++ F +A ED ++ Y ++ L+ RE EL P + + +
Sbjct: 379 QVLKNFYTILASKEDSLY-----------YRKSQSLDRFRE---ELKDMPNITYEKIPIH 424
Query: 448 EPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAP 507
K +YYA K S EI + V +YV+GL WV YY W W+YPYH+AP
Sbjct: 425 TKTGKIQYYASKLNASTESEI----RSVCYEYVKGLYWVYSYYILGSTGWDWYYPYHFAP 480
Query: 508 FASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYK-FYP 566
A+DL LS EI G P RP +QL+ LP S S +P+ + + + YK FYP
Sbjct: 481 LAADLSKLSISEIRINPGLPLRPLEQLLAVLPPMSKSMVPKALQPIFNE-----YKDFYP 535
Query: 567 PDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVHPQH 626
D + DM K F WQ VV LPF+D + +L + L E+L RN LDL + +
Sbjct: 536 EDVKTDMFDKVFLWQEVVILPFVDFRSILSENASKFNSLEYEDLNRNLRSLDLFFTSDKK 595
Query: 627 PLYQQITLYCQL 638
+++Y +L
Sbjct: 596 SSEIIMSMYSEL 607
>gi|367035618|ref|XP_003667091.1| hypothetical protein MYCTH_109078 [Myceliophthora thermophila ATCC
42464]
gi|347014364|gb|AEO61846.1| hypothetical protein MYCTH_109078 [Myceliophthora thermophila ATCC
42464]
Length = 561
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 161/299 (53%), Positives = 204/299 (68%), Gaps = 11/299 (3%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MG+PA +RWL+ +YP I V+EE P V +G PVD ++PNPNG EFDNLYLDMNGI+
Sbjct: 1 MGIPAAFRWLSAKYPKIISPVIEEKPLVLEDGTVVPVDTTQPNPNGEEFDNLYLDMNGIV 60
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ KPAP +++ +F Y D + +VRPRK+L +A+DGVAPRAKMNQQR+RRF
Sbjct: 61 HPCSHPEDKPAPRDEEEMMIEVFKYTDRVVNMVRPRKVLMIAVDGVAPRAKMNQQRSRRF 120
Query: 121 RAAKDAAEAEAEEERLRKEF-EEAGKLLSAKEKPETC-----DSNVITPGTQFMAVLSAA 174
RAA+DA E E +++L K +E G + +E E DSN ITPGT FM +L+A+
Sbjct: 121 RAAQDAKEKEEGKQQLLKMLKKENGSDATKEESVEAVVKKAFDSNSITPGTPFMDILAAS 180
Query: 175 LQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLD 234
L+Y+ +LN P W KVI+SDA VPGEGEHKIM ++R QRN P DPNTRH +YGLD
Sbjct: 181 LRYWCAYKLNTDPAWAKLKVIISDATVPGEGEHKIMEFVRSQRNSPEHDPNTRHVIYGLD 240
Query: 235 ADLIMLSLATHEIHFSILREVITLPGQQEK---CFVCGQVGHLAAECHGKPGDNPADWN 290
ADLIML LATHE HF +LRE + QQ K C +CGQ GH C G+ + D +
Sbjct: 241 ADLIMLGLATHEPHFRVLREDVFF--QQSKPRLCKLCGQTGHDERNCKGEAKEKNGDLD 297
>gi|71005096|ref|XP_757214.1| hypothetical protein UM01067.1 [Ustilago maydis 521]
gi|46096576|gb|EAK81809.1| hypothetical protein UM01067.1 [Ustilago maydis 521]
Length = 1478
Score = 321 bits (823), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 173/412 (41%), Positives = 249/412 (60%), Gaps = 65/412 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MG+P F+R++++RYP+ + + ED ++ EFDNLYLDMNGII
Sbjct: 1 MGIPKFFRFMSERYPM--ISQLIEDNKIP------------------EFDNLYLDMNGII 40
Query: 61 HPCFHPDGKPAP--TSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C HP+ A + +F ++F YI+H+F ++PRK+ +LA+DGVAPRAKMNQQR+R
Sbjct: 41 HNCSHPNDNDASFRITETQIFLAVFAYIEHLFNKIKPRKVFFLAVDGVAPRAKMNQQRSR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RFR AK+A E ++++ E G++L +E DSN ITPGT FMA LS L+YF
Sbjct: 101 RFRTAKEAKE-------IKEKAESRGEVLPEEE---AFDSNCITPGTPFMAKLSQQLEYF 150
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
I ++ + W+ +VILS +VPGEGEHKIM YIRL + P ++PN RHCLYGLDADLI
Sbjct: 151 IAKKITEDADWRNVQVILSGHDVPGEGEHKIMEYIRLSKAQPDYNPNVRHCLYGLDADLI 210
Query: 239 MLSLATHEIHFSILREVITL-PGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPI 297
ML L +H+ HF +LRE + P ++ K +
Sbjct: 211 MLGLLSHDPHFCLLREEVQFGPRRKSKG------------------------------SL 240
Query: 298 HKKKYQFLNIWVLREYLQYEL-DIPNP-PFPINFERIVDDFVFLCFFVGNDFLPHMPTLE 355
+ + L++ + REYL E D+ + PFP +FERI+DDF+ L FVGNDFLPH+P L
Sbjct: 241 EMQNFFLLHLSLFREYLDLEFQDLRSSLPFPYDFERIIDDFILLNIFVGNDFLPHLPGLH 300
Query: 356 IREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQK 407
I +GA++LL ++Y+R A GGYL ++G + DR+E + + +E + F++
Sbjct: 301 INQGAMDLLFNIYKRILPAAGGYLNESGTLRTDRLELVLSELRNFEMEQFER 352
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 89/167 (53%), Positives = 113/167 (67%), Gaps = 6/167 (3%)
Query: 450 GYKERYYADKFEI--SNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAP 507
+K+ YY +K EI +N E + K+ +Y+EGL WV YYY V SW WFY YHYAP
Sbjct: 536 AWKQSYYKEKLEIDYNNDEAMSKL----AFRYIEGLQWVLHYYYDGVASWGWFYDYHYAP 591
Query: 508 FASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPP 567
SDLK++ ++ F LG+PFRPFDQLMG LPA SS +P +R+LMTDP+SPI FYP
Sbjct: 592 KISDLKNVGQMKFEFTLGKPFRPFDQLMGVLPALSSQHIPSAFRDLMTDPNSPIIDFYPT 651
Query: 568 DFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNS 614
+F+ D+NGK+ W+ VVK+PFIDEK LL K EV+L EE RN
Sbjct: 652 NFEADLNGKKQDWEAVVKIPFIDEKRLLEALDKREVYLGIEERKRNG 698
>gi|429327281|gb|AFZ79041.1| 5'-3' exoribonuclease 2, putative [Babesia equi]
Length = 1356
Score = 321 bits (822), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 223/657 (33%), Positives = 316/657 (48%), Gaps = 102/657 (15%)
Query: 1 MGVPAFYRWLADRYPLSI-VDVVEEDPQVDGEGVARPVDVSKPNPNGM--------EFDN 51
MG+P+F+RWLA+RYPL + +VD + R + + +G+ FDN
Sbjct: 1 MGIPSFFRWLAERYPLICESQIGSASDKVDTFKLLRSTEANNETYDGLYNGFVAPEGFDN 60
Query: 52 LYLDMNGIIHPCFHPDGKPAPT--SYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPR 109
LYLD+NGIIH C H D S +D+F SIF I +I +VRP KLLYLA+DGVAP
Sbjct: 61 LYLDVNGIIHNCSHSDANLCQNIHSEEDIFVSIFHCITNIVNIVRPNKLLYLAVDGVAPT 120
Query: 110 AKMNQQRTRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPET----CDSNVITPGT 165
AK+NQQR RRFRA+ AE E + L + +EKP T D ITPGT
Sbjct: 121 AKINQQRERRFRAS-----AEMENQILVMNSIDIQN--GVEEKPNTDEYKFDPLQITPGT 173
Query: 166 QFMAVLSAALQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPN 225
FM L+ LQ+F Q + + W+ +V++S ++VPGEGEHKIM YIR + F+ N
Sbjct: 174 PFMERLTLHLQFFAQKMIAENKSWKNLQVVVSGSDVPGEGEHKIMEYIRNDKARRHFEAN 233
Query: 226 -----------TRHCLYGLDADLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHL 274
T HC+YGLDADLI+LSL THE +LRE + GQ + +
Sbjct: 234 NSSEDVKECKYTSHCIYGLDADLIILSLITHEPFVCLLRERVMF-GQMKNSTKMRMM--- 289
Query: 275 AAECHGKPGDNPADWNGVDDTPIHKKKYQFLNIWVLREYLQYELDIPNPPFPIN---FER 331
I+ Y L+I +LREY+ +L I NP + +R
Sbjct: 290 ----------------------INMSNYVLLHIGILREYILNDL-IENPKLRKDVKIMDR 326
Query: 332 IVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHVYRREFTAM-------GGYLT-DAG 383
+VDDFV + FVGNDFLPH+ I EG ++ ++ +Y+ T +LT D G
Sbjct: 327 VVDDFVLITLFVGNDFLPHLLLANIPEGGLDAVLGIYKGYITESIKSKPLDSIWLTCDCG 386
Query: 384 EVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYEYNEAMKLNARRESSEEL-LQAPVAVAD 442
E+ D FI A YE Q + + A + + K ++ L ++ + +
Sbjct: 387 EINFDNFLSFITRWAKYETNCIQNKLLAEPAKKNGKVEKSTITVVNNANLKIETDLTEMN 446
Query: 443 TVKLGEPG----YKERYYADKFEISNP---EEIDKVKKDVVLKYVEGLCWVCRYYYQDVC 495
T EP +K RYY K IS+ + K +V Y G+ W+ YYY+ V
Sbjct: 447 TRFPDEPKTVNEWKSRYYFAKLGISDQIGDGTLFKSVSTLVSGYFVGIQWILYYYYRSVP 506
Query: 496 SWQWFYPYHYAPFASDL----------------------KDLSD-LEITFFLGEPFRPFD 532
SW W + Y PF D+ LS +++ F + P P +
Sbjct: 507 SWSWSLSFKYPPFVHDMLLFLKNARVEYIRKQRHNMSMYSTLSQVMDMKFDISSPITPLE 566
Query: 533 QLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFI 589
QLM LP +S LP+ +M DP SP+ ++Y ++DM+ W G+ LP +
Sbjct: 567 QLMMILPPKASYLLPDVLGKIMNDPKSPLSRYYLTKIEVDMDNTNVKWGGIALLPAV 623
>gi|443895364|dbj|GAC72710.1| predicted hydrolases or acyltransferases [Pseudozyma antarctica
T-34]
Length = 1939
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 175/412 (42%), Positives = 246/412 (59%), Gaps = 65/412 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MG+P F+R++++RYPL I ++EE+ EFDNLYLDMNGII
Sbjct: 150 MGIPKFFRFMSERYPL-ISQLIEENKIP-------------------EFDNLYLDMNGII 189
Query: 61 HPCFHPDGKPAP--TSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C HP+ A + +F ++F YI+H+F ++P+K+ +LA+DGVAPRAKMNQQR+R
Sbjct: 190 HNCSHPNDNDASFRITETQIFLAVFAYIEHLFHKIKPKKVFFLAVDGVAPRAKMNQQRSR 249
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RFR AK+A E + + ER G++L +E DSN ITPGT FMA LS L+YF
Sbjct: 250 RFRTAKEAKEIKEKAER-------RGEILPDEE---AFDSNCITPGTPFMAKLSQQLEYF 299
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
I ++ + W+ +VILS +VPGEGEHKIM YIRL + PG++PN RHCLYGLDADLI
Sbjct: 300 IAKKITEDADWRNVQVILSGHDVPGEGEHKIMEYIRLCKAQPGYNPNVRHCLYGLDADLI 359
Query: 239 MLSLATHEIHFSILREVITL-PGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPI 297
ML L +H+ HF +LRE + P ++ K +
Sbjct: 360 MLGLLSHDPHFCLLREEVQFGPRRKSKG------------------------------SL 389
Query: 298 HKKKYQFLNIWVLREYLQYEL-DIPNP-PFPINFERIVDDFVFLCFFVGNDFLPHMPTLE 355
+ + L++ + REYL E D+ + PFP FERI+DDF+ L FVGNDFLPH+P L
Sbjct: 390 ESQNFFLLHLSLFREYLDLEFQDLRSSLPFPYEFERIIDDFILLNIFVGNDFLPHLPGLH 449
Query: 356 IREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQK 407
I EGA++LL +Y++ GGYL ++G + DR+E + + +E + F++
Sbjct: 450 INEGAMDLLFGIYKQILPVAGGYLNESGHLRTDRLELVLAELRNFEMEQFER 501
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 88/166 (53%), Positives = 112/166 (67%), Gaps = 6/166 (3%)
Query: 451 YKERYYADK--FEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPF 508
+K+ YY K F+ SN E + K+ +Y+EGL WV YYY V SW WFY YHYAP
Sbjct: 699 WKKDYYKQKLEFDYSNDEAMSKL----AFRYIEGLQWVLHYYYDGVASWGWFYDYHYAPK 754
Query: 509 ASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPD 568
SDLK++ ++ F LG+PFRPFDQLMG LPA S+ +P +R+LMTDP+SPI FYP +
Sbjct: 755 ISDLKNVGQMKFEFELGKPFRPFDQLMGVLPALSNQHIPTAFRDLMTDPNSPIIDFYPSN 814
Query: 569 FQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNS 614
F+ D+NGK+ W+ VVK+PFIDEK LL K EV+L EE RN
Sbjct: 815 FEADLNGKKQDWEAVVKIPFIDEKRLLEALDKREVYLGIEERKRNG 860
>gi|343426938|emb|CBQ70466.1| probable KEM1-multifunctional nuclease [Sporisorium reilianum SRZ2]
Length = 1481
Score = 318 bits (816), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 174/412 (42%), Positives = 245/412 (59%), Gaps = 65/412 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MG+P F+R++++RYPL I ++EE+ EFDNLYLDMNGII
Sbjct: 1 MGIPKFFRFMSERYPL-ISQLIEENKIP-------------------EFDNLYLDMNGII 40
Query: 61 HPCFHPDGKPAP--TSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C HP+ A + +F ++F YI+H+F ++P+K+ +LA+DGVAPRAKMNQQR+R
Sbjct: 41 HNCSHPNDNDASFRITETQIFLAVFAYIEHLFHKIKPKKVFFLAVDGVAPRAKMNQQRSR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RFR AK+A E + + ER G++L +E DSN ITPGT FMA LS L+YF
Sbjct: 101 RFRTAKEAKEIKEKAER-------RGEVLPEEE---AFDSNCITPGTPFMAKLSQQLEYF 150
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
I ++ + W+ +VILS +VPGEGEHKIM YIRL + P ++PN RHCLYGLDADLI
Sbjct: 151 IAKKITEDADWRNVQVILSGHDVPGEGEHKIMEYIRLSKAQPDYNPNVRHCLYGLDADLI 210
Query: 239 MLSLATHEIHFSILREVITL-PGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPI 297
ML L +H+ HF +LRE + P ++ K +
Sbjct: 211 MLGLLSHDPHFCLLREEVQFGPRRKSKG------------------------------SL 240
Query: 298 HKKKYQFLNIWVLREYLQYEL-DIPNP-PFPINFERIVDDFVFLCFFVGNDFLPHMPTLE 355
+ + L++ + REYL E D+ + PFP FERI+DDF+ L FVGNDFLPH+P L
Sbjct: 241 ESQNFFLLHLSLFREYLDLEFQDLRSSLPFPYEFERIIDDFILLNIFVGNDFLPHLPGLH 300
Query: 356 IREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQK 407
I EGA++LL +Y++ GGYL ++G + DR+E + + +E + F++
Sbjct: 301 INEGAMDLLFTIYKQILPVAGGYLNESGTLRTDRLELVLSELCNFEMEQFER 352
Score = 181 bits (460), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 87/165 (52%), Positives = 110/165 (66%), Gaps = 2/165 (1%)
Query: 450 GYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFA 509
+K+ YY +K EI + D K + +Y+EGL WV YYY V SW WFY YHYAP
Sbjct: 540 AWKKDYYKEKLEIDYNNDDDMSK--LAFRYIEGLQWVLHYYYDGVASWGWFYDYHYAPKI 597
Query: 510 SDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDF 569
SDLK+ ++ F LG+PFRPFDQLMG LPA SS +P +R+L+TDP+SPI FYP +F
Sbjct: 598 SDLKNAGQMKFEFELGKPFRPFDQLMGVLPALSSQHIPTAFRDLVTDPNSPIIDFYPNNF 657
Query: 570 QIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNS 614
+ D+NGK+ W+ VVK+PFIDEK LL K EV+L EE RN
Sbjct: 658 EADLNGKKQDWEAVVKIPFIDEKRLLEALDKREVYLGIEERKRNG 702
>gi|66359900|ref|XP_627128.1| Rat1 Kar1/Rat1 like 5'-3' exonuclease [Cryptosporidium parvum Iowa
II]
gi|46228551|gb|EAK89421.1| Rat1 Kar1/Rat1 like 5'-3' exonuclease [Cryptosporidium parvum Iowa
II]
Length = 1350
Score = 317 bits (813), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 177/457 (38%), Positives = 256/457 (56%), Gaps = 50/457 (10%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP FYRWL +RYPL + ++ + VD E +D+++PN NG EFD LYLDMNGII
Sbjct: 1 MGVPTFYRWLCNRYPLIVKELKD---AVDEETCLNDLDLTEPNING-EFDCLYLDMNGII 56
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC +P G P ++F + DYID ++ +V+PR+L+Y+AIDGVAPRAKMNQQR+RR+
Sbjct: 57 HPCCNPSGGDKPKDEAEMFTRVCDYIDRLYAMVKPRRLIYMAIDGVAPRAKMNQQRSRRY 116
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQ 180
+ A + E ++EF + G E E DSNVITPGT FM L+ L +I+
Sbjct: 117 KTALEMDYNRRAYEIAQEEFSKIG--YKCPEYVEKWDSNVITPGTPFMERLTMCLHAYIR 174
Query: 181 ARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
+ W+ VI SD+N+PGEGEHKI+ +IR QR+ ++PNTRH LYG DADLIML
Sbjct: 175 RKFETDESWRSISVIFSDSNIPGEGEHKILEFIRNQRSNEDYNPNTRHVLYGSDADLIML 234
Query: 241 SLATHEIHFSILREVITLPGQQEKCFVC---------GQVGHLAAECHGKPGDNPAD--W 289
L+THE +F I+RE + + + HL + +N +D
Sbjct: 235 GLSTHESYFYIIREAVRDFKVESPSSISILYNTWIEKINNNHLGSSFGDNGTNNSSDIIL 294
Query: 290 NGV-DDTPIHKKKYQFLNIW---------VLREYLQYELD-------------------- 319
NG+ + P KK + + W +LREYL ++
Sbjct: 295 NGIFQNGPNFGKKLRIYSWWSDIEIVDLSMLREYLNFDFGEIRDQIGYINNNIGENLVNE 354
Query: 320 ---IPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHVYRREFTAMG 376
N F +FER +DDF+FLCFF+GNDFLP++P I +G+++ ++ +Y R +G
Sbjct: 355 YGMKNNSDFQYDFERCIDDFIFLCFFIGNDFLPNLPVFSIYKGSLDQILGIYIRVLPRIG 414
Query: 377 GYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQ 413
YLT G ++ + + +F + + E +I + +R Q
Sbjct: 415 DYLTLEGNIIPNSIIQFFKYLRDLEYEIIIQESRFSQ 451
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 68/174 (39%), Positives = 99/174 (56%), Gaps = 12/174 (6%)
Query: 467 EIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDL-SDLEIT---- 521
+++++ V + Y+ GL WV YYY V SW W+YPYHYAP+ D+ +L SD++
Sbjct: 693 KLNEISDQVCIHYLRGLSWVLGYYYHGVPSWDWYYPYHYAPYVMDIVELLSDVKNENKIK 752
Query: 522 ------FFLGEPFRPFDQLMGTLPAASSS-ALPEKYRNLMTDPSSPIYKFYPPDFQIDMN 574
F LG+PF F+QLM LP S LP+++ N+M D +P+ +FYP F+ D N
Sbjct: 753 ESLIGEFNLGKPFTQFEQLMSVLPPKSGKICLPKEFYNMMIDKDNPLSEFYPSKFKQDPN 812
Query: 575 GKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVHPQHPL 628
G + W+ V LPFID+K+LL LE + +RN + D+LY PL
Sbjct: 813 GNKQRWKWVALLPFIDQKVLLETVIPLENEMDVLSKYRNKLGCDILYSFKFSPL 866
>gi|378727731|gb|EHY54190.1| phosphodiesterase/alkaline phosphatase D [Exophiala dermatitidis
NIH/UT8656]
Length = 1413
Score = 317 bits (813), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 181/436 (41%), Positives = 250/436 (57%), Gaps = 74/436 (16%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP F+RWL++RYP +I ++ E+ EFD LYLDMNGII
Sbjct: 1 MGVPKFFRWLSERYP-AISQLIAEN-------------------RIPEFDCLYLDMNGII 40
Query: 61 HPCFHPDGKPAPT---SYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRT 117
H C H D +PT + + +F +IF+YI+H+F ++P+KL ++AIDGVAPRAKMNQQR
Sbjct: 41 HNCTHKDSD-SPTFRMTEEKMFIAIFNYIEHLFGKIKPKKLFFMAIDGVAPRAKMNQQRA 99
Query: 118 RRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQY 177
RRFR A DA +A E+ KE L KE P DSN ITPGT+FMA L+ L+Y
Sbjct: 100 RRFRTALDAEKAR---EKAIKE-----GLEMPKEDP--FDSNCITPGTEFMAKLTKQLKY 149
Query: 178 FIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADL 237
FI ++++ WQ +V+LS VPGEGEHKIM YIR + PG+DPN RHCLYGLDADL
Sbjct: 150 FISKKVSEDVDWQGVEVVLSGHEVPGEGEHKIMEYIRQAKAQPGYDPNVRHCLYGLDADL 209
Query: 238 IMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPI 297
IML L +H+ HF +LRE +T Q K +
Sbjct: 210 IMLGLLSHDPHFCLLREEVTFGRQATK----------------------------KSKEL 241
Query: 298 HKKKYQFLNIWVLREYLQYELDIPNPP----FPINFERIVDDFVFLCFFVGNDFLPHMPT 353
+ + L++ ++REYL+ E P FP + ERI+DDF+ + FFVGNDFLP++P
Sbjct: 242 EHQNFYLLHLCIVREYLELEFQELEQPGALSFPFDMERIIDDFILMAFFVGNDFLPNLPN 301
Query: 354 LEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQ 413
L I EGA+ L+ Y+ MGGY+ + G + L+R+ + +++ E + F+
Sbjct: 302 LHINEGALALMFQKYKEVLPKMGGYINEQGVINLERLGVLLDALSEVEYRFFES------ 355
Query: 414 AYEYNEAMKLNARRES 429
EY +A +NA+R +
Sbjct: 356 --EYADAKWINAKRNA 369
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 90/220 (40%), Positives = 130/220 (59%), Gaps = 6/220 (2%)
Query: 451 YKERYYADKFE--ISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPF 508
+K++YY +KF+ + N EE+ K+ ++ YV+GL WV YYY+ + SW WFY YHY+P
Sbjct: 513 WKDKYYREKFDWGLDNDEELRKLAEN----YVQGLQWVLFYYYRGIASWPWFYQYHYSPM 568
Query: 509 ASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPD 568
SD+K ++ F LG+PF+PF QLMG LP S +PE Y LMT SPI FYP D
Sbjct: 569 ISDIKKGLGADLNFQLGQPFKPFQQLMGVLPDRSKKIVPEVYHELMTSKDSPIIDFYPRD 628
Query: 569 FQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVHPQHPL 628
F++DMNGK+ W+ VVK+PFIDEK LL+ + + L+E+E RN + L +V+
Sbjct: 629 FELDMNGKKMEWEAVVKIPFIDEKRLLKAMEPKDALLSEDERVRNDFGVSLKFVYSPEVD 688
Query: 629 YQQITLYCQLYHQLPPQDRFAWEIDVNASGGMNGYIWLCE 668
Y + ++ LP E ++ G+ Y+ L E
Sbjct: 689 YTYPSSLVGIFPDLPHCHCIQNEFELPTMDGLEPYVGLVE 728
>gi|336468281|gb|EGO56444.1| hypothetical protein NEUTE1DRAFT_130400 [Neurospora tetrasperma
FGSC 2508]
Length = 513
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 153/299 (51%), Positives = 201/299 (67%), Gaps = 6/299 (2%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MG+PA +RWL+ +YP I V+E+ P +G PVD +KPNPNG EFDNLYLDMNGI+
Sbjct: 1 MGIPAAFRWLSTKYPKIISPVIEDQPITMPDGTVIPVDATKPNPNGEEFDNLYLDMNGIV 60
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ +PAP +++ +F Y D + +VRPRKLL +A+DGVAPRAKMNQQR+RRF
Sbjct: 61 HPCSHPEDRPAPKDEEEMMVEVFKYTDRVVNMVRPRKLLMIAVDGVAPRAKMNQQRSRRF 120
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETC-----DSNVITPGTQFMAVLSAAL 175
RAA++A E E ++++ + ++ +E E DSN ITPGT FM +L+A+L
Sbjct: 121 RAAREAMEKEEDKQKFVELLKKQNGKPQEEEPVEIVVKKAFDSNSITPGTPFMDILAASL 180
Query: 176 QYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDA 235
+Y+ +LN P W KVI+SDA VPGEGEHKIM ++R QR P DPNTRH +YGLDA
Sbjct: 181 RYWCSYKLNTDPAWANIKVIISDATVPGEGEHKIMEFVRSQRGSPNHDPNTRHVIYGLDA 240
Query: 236 DLIMLSLATHEIHFSILRE-VITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVD 293
DLIML LATHE HF +LRE V + C +CGQ GH A C G+ + +++ D
Sbjct: 241 DLIMLGLATHEPHFRVLREDVFAQDSRPRLCKICGQKGHDAMNCKGEAKEKNGEFDEKD 299
>gi|19114394|ref|NP_593482.1| exonuclease II Exo2 [Schizosaccharomyces pombe 972h-]
gi|729456|sp|P40383.1|XRN1_SCHPO RecName: Full=5'-3' exoribonuclease 1; AltName: Full=Exonuclease 2;
AltName: Full=Exonuclease II; Short=Exo II; AltName:
Full=p140
gi|531022|gb|AAB42181.1| deoxyribonuclease [Schizosaccharomyces pombe]
gi|2370486|emb|CAB11514.1| exonuclease II Exo2 [Schizosaccharomyces pombe]
Length = 1328
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 171/410 (41%), Positives = 239/410 (58%), Gaps = 63/410 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MG+P F+RW+++RYPL ++E D EFDNLYLDMNGI+
Sbjct: 1 MGIPKFFRWMSERYPL-CSQLIEND-------------------RIPEFDNLYLDMNGIL 40
Query: 61 HPCFHP--DGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C H D P ++++ +IF+YI+H+F ++P+KLLY+A+DG APRAKMNQQR+R
Sbjct: 41 HNCTHKNDDHSSPPLPEEEMYIAIFNYIEHLFEKIKPKKLLYMAVDGCAPRAKMNQQRSR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RFR AKDA +A + ER ++F E E DSN ITPGT FM +S L YF
Sbjct: 101 RFRTAKDAHDARLKAERNGEDFPE-----------EQFDSNCITPGTTFMERVSRQLYYF 149
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
I ++ WQ +VI S + PGEGEHKIM YIR Q+ P ++PNTRHCLYGLDADLI
Sbjct: 150 IHKKVTNDSQWQNIEVIFSGHDCPGEGEHKIMEYIRTQKAQPSYNPNTRHCLYGLDADLI 209
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
ML L +H+ HF +LRE +T PA N + +
Sbjct: 210 MLGLLSHDPHFCLLREEVTF--------------------------GPASRNRSKE--LA 241
Query: 299 KKKYQFLNIWVLREYLQYELDIPNPPFPINF--ERIVDDFVFLCFFVGNDFLPHMPTLEI 356
+K+ L++ +LREYL++E F + E+I+DDF+ L FFVGNDFLPH+P L I
Sbjct: 242 HQKFYLLHLSLLREYLEFEFQECRSTFTFKYDLEKILDDFILLAFFVGNDFLPHLPGLHI 301
Query: 357 REGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQ 406
EGA+ L+ +Y++ + GGY+ + G + + R+E + + +E +IF+
Sbjct: 302 NEGALALMFSIYKKVMPSAGGYINEKGVINMARLELILLELENFEKEIFK 351
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 76/164 (46%), Positives = 102/164 (62%), Gaps = 2/164 (1%)
Query: 451 YKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFAS 510
+K+ YY K S +E + K + +YVEGL WV YYY+ SW W+Y YH+AP S
Sbjct: 496 WKDDYYRSKVGFSYYDE--EALKAMAERYVEGLQWVLFYYYRGCQSWGWYYNYHFAPKIS 553
Query: 511 DLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQ 570
D+ D++I F +G PFRPF+QLM LPA S + +P +R+LM + SPI FYP +F
Sbjct: 554 DVLKGLDVKIDFKMGTPFRPFEQLMAVLPARSQALVPPCFRDLMVNSESPIIDFYPENFA 613
Query: 571 IDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNS 614
+D NGK +W+ VV +PFIDE L+ + FLTEEE RNS
Sbjct: 614 LDQNGKTASWEAVVIIPFIDETRLIDALASKDKFLTEEERKRNS 657
>gi|221054456|ref|XP_002258367.1| exoribonuclease [Plasmodium knowlesi strain H]
gi|193808436|emb|CAQ39139.1| exoribonuclease, putative [Plasmodium knowlesi strain H]
Length = 1324
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 192/476 (40%), Positives = 268/476 (56%), Gaps = 58/476 (12%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVE-------------EDPQVDGEGVA--RPVDVS----- 40
MGVP FYRWL RYP E +D D EG A R D+S
Sbjct: 1 MGVPTFYRWLVTRYPKIAKATYETRDSDVYARRTKIQDGHRDAEGKATYRVPDLSDYVNN 60
Query: 41 ------KPNPNGMEFDNLYLDMNGIIHPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVR 94
N NG FDNLYLDMNGIIH C H D S +++F +IF YI+ +F ++
Sbjct: 61 TDENHCSDNINGY-FDNLYLDMNGIIHLCSHSDNSRRAKSNEEIFLNIFLYIERLFDIIE 119
Query: 95 PRKLLYLAIDGVAPRAKMNQQRTRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPE 154
PRKLLY+AIDGVAP+AKMNQQR+RRF++ + LR++F L +E PE
Sbjct: 120 PRKLLYMAIDGVAPKAKMNQQRSRRFKSILCSEIERKAYIELREKF-----LSENREVPE 174
Query: 155 TC---DSNVITPGTQFMAVLSAALQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMS 211
DSN+ITPGTQFM LS AL+YF++ ++ W+ VI SDANV GEGEHKI +
Sbjct: 175 EFTFWDSNIITPGTQFMYELSVALKYFVEHKITNDDKWKNIVVIFSDANVCGEGEHKIYN 234
Query: 212 YIRLQRNLPGFDPNTRHCLYGLDADLIMLSLATHEIHFSILREVITLPGQ-----QEKCF 266
+I+ QR PG+DPNTRH ++G+DADLIMLSLA+HE +F ILRE+I L + Q+K F
Sbjct: 235 FIKSQRGQPGYDPNTRHVIHGMDADLIMLSLASHEPYFYILREIIILDSKGEEKVQDKDF 294
Query: 267 V-----------CGQVGHLAAECHGKPGD-NPADWNGVDDTPIHKKKY---QFLNIWVLR 311
V C + + K D + A+ N + I+ + + Q L++ +LR
Sbjct: 295 VGKLKSKQDLPLCTTHMRKTKKIYTKYNDPHYANINKSPNYSINDENWNELQILDLTILR 354
Query: 312 EYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHVYRRE 371
EYL E + N ER +DDF+F+CF GNDFLPH+P++ I G+I+ L+ +Y++
Sbjct: 355 EYLSKEFFFDS---SYNLERCIDDFIFICFLCGNDFLPHLPSISIAAGSIDQLVLLYQKV 411
Query: 372 FTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYEYNEAMKLNARR 427
+G YL + G++ L K++ +A E + F + ++ E + K + +R
Sbjct: 412 LPVLGDYLINEGKINLKPFSKYVSFIAEVERETFISQYDFKKKREKRDQQKDSLKR 467
Score = 166 bits (419), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 79/186 (42%), Positives = 116/186 (62%), Gaps = 1/186 (0%)
Query: 454 RYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLK 513
+YY KF + + ID K+VV KY+EGL WV YY+Q W W+YPY+YAP +SDL
Sbjct: 728 KYYKAKFHLDETDYIDDFVKEVVYKYIEGLAWVLSYYFQSCPMWHWYYPYYYAPLSSDLI 787
Query: 514 DLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDM 573
+ ++ F EP P +QL+ LP+ SS LP+ YR LM P SPI FYP F+ +
Sbjct: 788 -IDNVNFIFQKDEPILPLEQLLCVLPSNSSHCLPKGYRELMVRPDSPIIDFYPKTFKEEE 846
Query: 574 NGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVHPQHPLYQQIT 633
NGK++ +Q V+ LPF+D++ +++ ++L LTEEE RN ++ +Y++ HPL +QIT
Sbjct: 847 NGKKYKYQWVILLPFVDKERIIKHARELNDTLTEEEKKRNRRGMNKIYMNCSHPLSKQIT 906
Query: 634 LYCQLY 639
+ Y
Sbjct: 907 KSIKAY 912
>gi|388851631|emb|CCF54627.1| probable KEM1-multifunctional nuclease [Ustilago hordei]
Length = 1481
Score = 315 bits (808), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 174/412 (42%), Positives = 245/412 (59%), Gaps = 65/412 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MG+P F+R++++RYPL I ++EE+ EFDNLYLDMNGII
Sbjct: 1 MGIPKFFRFMSERYPL-ISQLIEENKIP-------------------EFDNLYLDMNGII 40
Query: 61 HPCFHPDGKPAP--TSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C HP+ A + +F ++F YI+H+F ++P+K+ +LA+DGVAPRAKMNQQR+R
Sbjct: 41 HNCSHPNDSDASFRITETQIFLAVFAYIEHLFHKIKPKKVFFLAVDGVAPRAKMNQQRSR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RFR AK+A E + + ER G++L +E DSN ITPGT FMA LS L+YF
Sbjct: 101 RFRTAKEAKEIKEKAER-------RGEVLPEEE---AFDSNCITPGTPFMAKLSQQLEYF 150
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
I ++ + W+ +VILS +VPGEGEHKIM YIRL + P ++PN RHCLYGLDADLI
Sbjct: 151 IAKKITEDADWRNVQVILSAHDVPGEGEHKIMEYIRLCKAQPDYNPNVRHCLYGLDADLI 210
Query: 239 MLSLATHEIHFSILREVITL-PGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPI 297
ML L +H+ HF +LRE + P ++ K +
Sbjct: 211 MLGLLSHDPHFCLLREEVQFGPRRKSKG------------------------------SL 240
Query: 298 HKKKYQFLNIWVLREYLQYEL-DIPNP-PFPINFERIVDDFVFLCFFVGNDFLPHMPTLE 355
+ + L++ + REYL E D+ + PF +FERI+DDF+ L FVGNDFLPH+P L
Sbjct: 241 ESQNFFLLHLSLFREYLDLEFQDLRSSLPFTYDFERIIDDFILLDIFVGNDFLPHLPGLH 300
Query: 356 IREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQK 407
I EGAI+LL +Y++ GGYL ++G + DR+E + + +E + F++
Sbjct: 301 INEGAIDLLFSIYKQILPVAGGYLNESGNLRTDRLELVLAELCKFEMEQFER 352
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 85/165 (51%), Positives = 112/165 (67%), Gaps = 2/165 (1%)
Query: 450 GYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFA 509
+K+ YY +K EI + D+ + +Y+EGL WV YYY V SW WFY YHYAP
Sbjct: 544 AWKKDYYKEKLEIDYSD--DEAMGKLAFRYIEGLQWVLHYYYDGVASWGWFYDYHYAPKI 601
Query: 510 SDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDF 569
SDLK++ +++ F LG+PFRPFDQLMG LPA S+ +P +R+LMTDP+SPI FYP +F
Sbjct: 602 SDLKNVGEMKFEFELGKPFRPFDQLMGVLPALSNQHIPFAFRDLMTDPNSPIIDFYPSNF 661
Query: 570 QIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNS 614
+ D+NGK+ W+ VVK+PFIDEK LL K E++L EE RN
Sbjct: 662 EADLNGKKQDWEAVVKIPFIDEKRLLDALNKREIYLGIEERKRNG 706
>gi|339237353|ref|XP_003380231.1| 5'-3' exoribonuclease 1 [Trichinella spiralis]
gi|316976968|gb|EFV60153.1| 5'-3' exoribonuclease 1 [Trichinella spiralis]
Length = 614
Score = 315 bits (807), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 223/652 (34%), Positives = 326/652 (50%), Gaps = 110/652 (16%)
Query: 1 MGVPAFYRWLADRYP-LSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGI 59
MGVP F+RWL++RYP LS + V + P +DNLYLD NGI
Sbjct: 1 MGVPRFFRWLSERYPGLSQLVVESQIPS---------------------YDNLYLDFNGI 39
Query: 60 IHPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRR 119
IH C HP+ A F + +F L++PRK+L++A+DGVAPRAKMNQQR+RR
Sbjct: 40 IHNCSHPNSPDA----------TFRCTEGLFQLIKPRKVLFIAVDGVAPRAKMNQQRSRR 89
Query: 120 FRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPET--CDSNVITPGTQFMAVLSAALQY 177
F +AK EAE+ RL+ + + + P++ DSN ITPGT+FM L L+Y
Sbjct: 90 FMSAK-----EAEDSRLKA-------IRNGEVIPDSDPFDSNCITPGTEFMERLHIHLKY 137
Query: 178 FIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADL 237
FI +L+ P WQ V S + PGEGEHKI+++IR R+ +D NT HC+YGLDADL
Sbjct: 138 FINLKLSSDPLWQNVDVYYSGHDCPGEGEHKILAFIRFMRSQADYDSNTTHCIYGLDADL 197
Query: 238 IMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPI 297
I L +A HE +FSILRE + + +K ++ +C D
Sbjct: 198 IFLGMAMHEPYFSILREEVVYDSRSKKRYI---------KCDDD------------DDNN 236
Query: 298 HKKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIR 357
+ ++ + R Q + D+ + E+I+DD++F+ FF+GNDF+P++P L
Sbjct: 237 NLLRFAYGQFAYGRRSEQVKPDVYDE------EKIIDDWIFMSFFIGNDFIPNVPMLITN 290
Query: 358 EGAINLLMHVYRREFTAMGG---------------YLTDAGEVLLDRVEKFIQSVAVYED 402
E A+ + Y+ F M +L+ + + + + S AV +
Sbjct: 291 ENALPNVWLAYQNAFPNMDACGWLESKRAQRVRFHFLSSSPMLFIAFSFRMHDSRAV--E 348
Query: 403 QIFQKRTRIQQAYEYNEAMKLNARRESSEELLQAPVAVA----DTVKLGEPGYKERYYAD 458
+IF R+QQ ++ + A S +LQ+ V + DT + D
Sbjct: 349 KIF---LRLQQITSFSSQSE-TANGSSDSCVLQSLVVFSEKLPDTCSCALENDDGTLFDD 404
Query: 459 KFEIS---------NPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFA 509
+ E D + + VL E + + + S+ Y +HYAPF
Sbjct: 405 DDDDDEDSEDAVDMRSETCDGLYEVSVLTEEESDMSLHSLFRKFRASF---YGFHYAPFV 461
Query: 510 SDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDF 569
SDL D + EITF LGEPF PF QL+ LP +S LPE Y++LM +P SP+ YP D
Sbjct: 462 SDLCDFNVGEITFELGEPFLPFQQLLAVLPPSSRKLLPEPYQDLMVNPDSPLSYAYPEDV 521
Query: 570 QIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLY 621
+ DMNGK++ W+ ++KLPFIDE++L L ++E RN LY
Sbjct: 522 ERDMNGKKYEWECILKLPFIDEEILFDAVYPFNDALKDDEKRRNRFGKCYLY 573
>gi|396082120|gb|AFN83732.1| 5-3 exoribonuclease [Encephalitozoon romaleae SJ-2008]
Length = 656
Score = 315 bits (806), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 214/673 (31%), Positives = 321/673 (47%), Gaps = 101/673 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP+ +RWL + ++I ++E +P VD LYLD N II
Sbjct: 1 MGVPSLFRWLQLSHKVAIHSILE-NPSVDC---------------------LYLDFNAII 38
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
H C P + D+ K++ D+ID+I L RPRKLLY+AIDGVAPRAK++ QR RR+
Sbjct: 39 HTCIKPGLESEEEIERDLHKTVGDFIDYILLKARPRKLLYIAIDGVAPRAKLSHQRARRY 98
Query: 121 RAA-----------------KDAAEAEAEEERLRKEFEEAGKL--------------LSA 149
++A +E E +EE +EF L L+
Sbjct: 99 KSALGKKEGSSVKSISKTEFAPQSEKERKEEGRDEEFTGESSLYDKFIVEDISESSSLAV 158
Query: 150 KEKPETCDSNVITPGTQFMAVLSAALQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKI 209
+ E D N ITPGT FM L L +IQ +L+ PG K+I S VPGEGE KI
Sbjct: 159 DVETENFDLNCITPGTPFMERLHNVLISYIQYKLSNDPGVSHLKIIYSSYLVPGEGEQKI 218
Query: 210 MSYIRLQRNLPGFDPNTRHCLYGLDADLIMLSLATHEIHFSILREVITLPGQ---QEKCF 266
MS+IR Q ++ N H +Y D DL+ L L+ H I+R+ + P + ++ C
Sbjct: 219 MSFIRSQESVAR---NDVHMIYSPDGDLMFLGLSLHRSKVLIMRDYFS-PNKARMKKTCA 274
Query: 267 VCGQVGHLAAECHGKPGDNPADWNGVDDTPIHKKKYQFLNIWVLREYLQYELDIPNPPFP 326
C + GH EC G + + + + L I ++RE+ +Y
Sbjct: 275 KCKRSGHSDEEC-GVFTNYHFVYVNISE----------LRIRLIREFRRYTTQ------R 317
Query: 327 INFERIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVL 386
N ERI++D++FLCF +GNDF+P P L+IR +I + + + F+ Y+T + +
Sbjct: 318 FNEERILNDWIFLCFLLGNDFVPPTPCLDIRFHSIETITEIMAKNFSVTKSYITCSSTIN 377
Query: 387 LDRVEKFIQSVAVYEDQIFQKRTRIQQAYEYNEAMKLNARRESSEELLQAPVAVADTVKL 446
++ F +A ED ++ +++ Q ++ E +K P + + +
Sbjct: 378 FQALKNFCTILAAKEDGLYHRKS--QSLDKFREGLK------------DVPNITYEKIPI 423
Query: 447 GEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYA 506
K +YYA K + +I K+V +Y++GL WV YY W W+YPYH+A
Sbjct: 424 HTKTGKIQYYASKLNANTESDI----KNVCYEYIKGLYWVYSYYILGSTGWDWYYPYHFA 479
Query: 507 PFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYK-FY 565
P A DL +S EI G P RP +QL+ LP S +P+ + + D YK Y
Sbjct: 480 PLAVDLSKISISEIRINPGLPLRPLEQLLAVLPPMSKGMVPKVLQPIFND-----YKDCY 534
Query: 566 PPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVHPQ 625
P D + DM K + WQ VV LPF+D + +L + L E+L RN LDLL+ +
Sbjct: 535 PEDVKTDMFDKVYLWQEVVLLPFVDFRSILSENASRFNSLGYEDLSRNLRSLDLLFTVDK 594
Query: 626 HPLYQQITLYCQL 638
+ +Y +L
Sbjct: 595 KSSEVILNMYSEL 607
>gi|326488040|dbj|BAJ89859.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 540
Score = 313 bits (803), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 151/253 (59%), Positives = 182/253 (71%), Gaps = 2/253 (0%)
Query: 442 DTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFY 501
D +KLGEPG++ERYY DKF PE+I+++++DVVLKY EGLCWV YYY+ VCSWQWFY
Sbjct: 21 DKIKLGEPGWRERYYEDKFGARTPEQIEEIRRDVVLKYTEGLCWVMHYYYEGVCSWQWFY 80
Query: 502 PYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPI 561
PYHYAPFASDLK L L ITF LG PF+PFDQLMG PAASS ALP +YR LMTDPSSPI
Sbjct: 81 PYHYAPFASDLKGLGQLNITFELGSPFKPFDQLMGVFPAASSHALPVQYRQLMTDPSSPI 140
Query: 562 YKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLY 621
FYP DF++DMNGKRF+WQG+ KLPFIDE LL + KK+E LT EE RNS M ++L+
Sbjct: 141 IDFYPIDFEVDMNGKRFSWQGIAKLPFIDEDRLLSEIKKVEHTLTPEEARRNSTMYNMLF 200
Query: 622 VHPQHPLYQQITLYCQLYHQLPPQDR--FAWEIDVNASGGMNGYIWLCERNGLRSIIPSP 679
V+ HP+ I + L +DR ++D +ASGGMNGYI LC + + SP
Sbjct: 201 VNGAHPISPYIYSLSSKFGHLADKDRNEIKEQLDPSASGGMNGYISLCGGDPSPPVFRSP 260
Query: 680 VKGLPDIERNQAM 692
V GL DI NQ +
Sbjct: 261 VDGLEDIMDNQVI 273
>gi|258571185|ref|XP_002544396.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237904666|gb|EEP79067.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 1372
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 178/440 (40%), Positives = 252/440 (57%), Gaps = 74/440 (16%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP F+RWL++RYP +I ++ E+ EFD LYLDMNGII
Sbjct: 1 MGVPKFFRWLSERYP-AISQLIAEN-------------------RIPEFDCLYLDMNGII 40
Query: 61 HPCFHPDGKPAPT---SYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRT 117
H C H D +PT + D +F +IF+YI+H+F ++P+KL ++AIDGVAPRAKMNQQR
Sbjct: 41 HNCTHKDSD-SPTFRMTEDKMFIAIFNYIEHLFGKIKPKKLFFMAIDGVAPRAKMNQQRA 99
Query: 118 RRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQY 177
RRFR A DA A+ E+ +R+ E K + DSN ITPGT+FMA L+ L+Y
Sbjct: 100 RRFRTALDAEMAK--EKAIREGVE--------MPKEDAFDSNCITPGTEFMAKLTKQLKY 149
Query: 178 FIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADL 237
FI ++++ WQ +VILS VPGEGEHKIM YIR + PG+DPN RHCLYGLDADL
Sbjct: 150 FINKKVSEDAEWQGVEVILSGHEVPGEGEHKIMEYIRQSKAQPGYDPNVRHCLYGLDADL 209
Query: 238 IMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPI 297
IML L +H+ HF +LRE +T Q +K +
Sbjct: 210 IMLGLLSHDPHFCLLREEVTFGRQSQKKV----------------------------KEL 241
Query: 298 HKKKYQFLNIWVLREYLQY---ELDIPNP-PFPINFERIVDDFVFLCFFVGNDFLPHMPT 353
+ + L++ ++REYL+ EL++ F + ERI+DDF+ + FFVGNDFLP++P
Sbjct: 242 EHQNFYLLHLCIVREYLELEFQELEVEGALKFDFDMERIIDDFILMAFFVGNDFLPNLPN 301
Query: 354 LEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQ 413
L I EGA+ + VY+ + GY+ + G + LDR+ + S+ E + F+
Sbjct: 302 LHINEGALAWMFKVYKEVLPKLDGYINERGRINLDRLGVLLDSLGDVEFRFFEA------ 355
Query: 414 AYEYNEAMKLNARRESSEEL 433
EY++A + +++ EE+
Sbjct: 356 --EYSDARWIKSKQNVGEEV 373
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 50/78 (64%)
Query: 546 LPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFL 605
+PE Y +LMT P SPI FYP DF++DMNGK+ W+ VVK+PFI+E LL E L
Sbjct: 538 VPEAYHSLMTSPDSPIIDFYPRDFELDMNGKKMEWEAVVKIPFINETRLLNAMATKEHLL 597
Query: 606 TEEELFRNSVMLDLLYVH 623
T EE RNS + L + H
Sbjct: 598 TPEEKSRNSFGVTLKFTH 615
>gi|407925965|gb|EKG18938.1| Putative 5-3 exonuclease [Macrophomina phaseolina MS6]
Length = 1429
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 169/413 (40%), Positives = 241/413 (58%), Gaps = 66/413 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP F+RW+++RYP +I ++ E+ EFD LYLDMNGII
Sbjct: 1 MGVPKFFRWMSERYP-AISQLIAEN-------------------RIPEFDCLYLDMNGII 40
Query: 61 HPCFHPDGKPAPT---SYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRT 117
H C H D +PT S D +F +IF+YI+H+F ++P+KL ++AIDGVAPRAKMNQQR
Sbjct: 41 HNCTHNDSD-SPTHRMSEDKMFIAIFNYIEHLFGKIKPQKLFFMAIDGVAPRAKMNQQRA 99
Query: 118 RRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQY 177
RRFR A+DA EA E+ +R+ E + DSN ITPGT+FMA L+ L+Y
Sbjct: 100 RRFRTARDAEEAR--EKAIREGVEMPAE--------PAFDSNCITPGTEFMARLTQHLKY 149
Query: 178 FIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADL 237
FI ++++ WQ +++LS VPGEGEHKIM YIR ++ PG+DPN RHCLYGLDADL
Sbjct: 150 FINKKVSEDVDWQGVEIVLSGHEVPGEGEHKIMEYIRQAKSQPGYDPNVRHCLYGLDADL 209
Query: 238 IMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPI 297
IML L +H+ HF +LRE +T Q +K +
Sbjct: 210 IMLGLLSHDPHFCLLREEVTFGRQSQK----------------------------KSKEL 241
Query: 298 HKKKYQFLNIWVLREYLQYELDIPNPP----FPINFERIVDDFVFLCFFVGNDFLPHMPT 353
+ + +++ ++REYL+ E P FP + ER++DDF+ + FFVGNDFLP++P
Sbjct: 242 EHQNFYLMHLCIVREYLELEFQELEQPGALDFPFDMERVIDDFILMAFFVGNDFLPNLPH 301
Query: 354 LEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQ 406
L I EGA+ L+ VY++ GY+ + G + L+R+ + ++ E + F+
Sbjct: 302 LHINEGALALMFGVYKKVLPKAKGYINEGGVINLERLALLLDELSHVEYRFFE 354
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 85/184 (46%), Positives = 113/184 (61%), Gaps = 14/184 (7%)
Query: 451 YKERYYADKFE--ISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPF 508
+K+ YY K E +++ EE+ K+ ++ YV+GL WV YYY+ V SW W+Y YHYAP
Sbjct: 510 WKDNYYKSKLEWGLNDKEELRKMTEN----YVQGLQWVLFYYYRGVASWPWYYGYHYAPM 565
Query: 509 ASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPD 568
SD+K+ ++ F LG+PFRP+ QLMG LP S S +P Y LMT SPI FYP D
Sbjct: 566 ISDVKEGLKADLNFKLGQPFRPYQQLMGVLPDRSKSIVPAAYHELMTQKESPIIDFYPRD 625
Query: 569 FQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVML--------DLL 620
F++DMNGK+ W+ VVK+PFIDEK LL + LT+ E RN + DL
Sbjct: 626 FELDMNGKKMDWEAVVKIPFIDEKRLLPAMATKDHLLTQGERDRNEFGVTLKFTYQPDLD 685
Query: 621 YVHP 624
YV+P
Sbjct: 686 YVYP 689
>gi|358055066|dbj|GAA98835.1| hypothetical protein E5Q_05523 [Mixia osmundae IAM 14324]
Length = 1437
Score = 312 bits (799), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 172/413 (41%), Positives = 232/413 (56%), Gaps = 65/413 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP F+RW+++RYP+ I +++E Q EFDNLYLDMNGII
Sbjct: 1 MGVPKFFRWVSERYPM-ISQLIQEGQQP-------------------EFDNLYLDMNGII 40
Query: 61 HPCFHPDGKPA--PTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C H DG + + +F +IF YI+ +F +RP++ ++AIDGVAPRAKMNQQR+R
Sbjct: 41 HNCSHKDGGDVHHRVTEEQMFLAIFTYIELLFSKIRPKQTFFMAIDGVAPRAKMNQQRSR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RFR AK+A EA R +E KE P DSN ITPGT FM LSA L+YF
Sbjct: 101 RFRTAKEAKEARDAAIRKGEEL--------PKEDP--FDSNAITPGTPFMTRLSAQLRYF 150
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
+ ++++ WQ +VILS VPGEGEHKIM +IR + PG++PN RHCLYGLDADLI
Sbjct: 151 VNKKVSEDADWQGIQVILSGHEVPGEGEHKIMQFIRHSKAQPGYNPNVRHCLYGLDADLI 210
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
ML L +H+ HF +LRE + G+ K +
Sbjct: 211 MLGLLSHDPHFCLLREEVVF-GKARKT----------------------------SQSLE 241
Query: 299 KKKYQFLNIWVLREYLQYELDI----PNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTL 354
K + L++ + REYL E P F + ERI+DDF+ L FVGNDFLPH+P L
Sbjct: 242 TKNFYLLHLSLFREYLDLEFQSLAADPTLGFQYDLERIIDDFILLAIFVGNDFLPHLPGL 301
Query: 355 EIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQK 407
I EGA+ LL +Y+R GGY+ + G++ R+ ++ + +E F+K
Sbjct: 302 HINEGALTLLFEIYKRVLPKAGGYINEHGQLNTHRLSLILEELQSFESDNFEK 354
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 82/166 (49%), Positives = 106/166 (63%), Gaps = 4/166 (2%)
Query: 450 GYKERYYADKFEISNPEEIDK-VKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPF 508
+K YY DK E E DK + +Y+EGL WV YYY V SW WFY YHYAP
Sbjct: 540 AWKTDYYRDKLEF---EFTDKPALHQLAFRYIEGLQWVLHYYYDGVASWGWFYDYHYAPK 596
Query: 509 ASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPD 568
SDL+++ +E F LG PF+PF+QLMG LP S++ LPE YR+L+T P SPI FYP D
Sbjct: 597 ISDLQNVDHMEFVFDLGRPFKPFEQLMGVLPDLSATILPEAYRDLLTSPESPIKDFYPRD 656
Query: 569 FQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNS 614
F++D+NGK+ W+ VVK+PFID+ LL + LT +E RN+
Sbjct: 657 FKLDLNGKKQDWEAVVKIPFIDQARLLHAMEGRSARLTPDEQQRNT 702
>gi|259480959|tpe|CBF74062.1| TPA: exonuclease II (Eurofung) [Aspergillus nidulans FGSC A4]
Length = 1398
Score = 312 bits (799), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 180/437 (41%), Positives = 253/437 (57%), Gaps = 76/437 (17%)
Query: 1 MGVPAFYRWLADRYP-LSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGI 59
MGVP F+RWL++RYP +S++ P EFDNLYLDMNGI
Sbjct: 1 MGVPKFFRWLSERYPAISMLIAENRIP---------------------EFDNLYLDMNGI 39
Query: 60 IHPCFHPDGKPAPT---SYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQR 116
IH C H D +PT + D +F +IF+YI+H++ ++P+KL ++A+DGVAPRAKMNQQR
Sbjct: 40 IHNCTHKDSD-SPTFRMTEDKMFIAIFNYIEHLYGKIKPKKLFFMAVDGVAPRAKMNQQR 98
Query: 117 TRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQ 176
RRFR A DA +A KE A + KE P DSN ITPGT+FMA L+ L+
Sbjct: 99 ARRFRTALDAEQA--------KEKAIAQGIEMPKEDP--FDSNCITPGTEFMAKLTEQLK 148
Query: 177 YFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDAD 236
YFI ++++ WQ +++LS VPGEGEHKIM YIR + PG+DPN RHCLYGLDAD
Sbjct: 149 YFISKKISEDKDWQGVEIVLSGHEVPGEGEHKIMEYIRHAKAQPGYDPNVRHCLYGLDAD 208
Query: 237 LIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTP 296
LIML L +H+ HF +LRE +T Q +K KP +
Sbjct: 209 LIMLGLLSHDPHFCLLREEVTFGRQVQK----------------KPKE------------ 240
Query: 297 IHKKKYQFLNIWVLREYLQYELDIPNPP----FPINFERIVDDFVFLCFFVGNDFLPHMP 352
+ + + L++ ++REYLQ E FP FER++DDF+ + FFVGNDFLP++P
Sbjct: 241 LEHQNFYLLHLCMVREYLQLEFQELEEEGIIDFPYEFERVIDDFILMAFFVGNDFLPNLP 300
Query: 353 TLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQ 412
L I EGA++L+ VY+ MGGY+ + G + L R+ + +++ E + F+
Sbjct: 301 NLHINEGALSLMFKVYKEVLPKMGGYINEQGTINLQRLGVLLDALSHVEYRFFEA----- 355
Query: 413 QAYEYNEAMKLNARRES 429
EY++A + A++ +
Sbjct: 356 ---EYSDATWMRAKQSA 369
Score = 169 bits (427), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 92/239 (38%), Positives = 134/239 (56%), Gaps = 9/239 (3%)
Query: 451 YKERYYADKFE--ISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPF 508
+K++YY +KF + N EE+ K+ ++ YV+GL WV YYY+ + SW WF+ HYAP
Sbjct: 508 WKDKYYMEKFGWGLDNHEEMRKLTEN----YVQGLQWVLFYYYRGIASWPWFFNSHYAPM 563
Query: 509 ASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPD 568
SD+K + ++ F LG PFRP+DQLMG LP S +P+ Y +LM+ P SPI FYP D
Sbjct: 564 ISDVKKGLNADMNFRLGRPFRPYDQLMGVLPDRSKKIVPKAYHDLMSSPDSPIIDFYPRD 623
Query: 569 FQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVHPQHPL 628
F++DMNGK+ W+ VVK+PFIDE+ LL E LT EE RN + L + +
Sbjct: 624 FELDMNGKKMEWEAVVKIPFIDERRLLDALATREHLLTPEEKARNGFGVSLKFTYSPDTE 683
Query: 629 YQQITLYCQLYHQLPPQDRFAWEIDVNASGGMNGYIWLCERNGLRSIIPSPVKGLPDIE 687
Y + ++ +P D+ G+ Y+ L E L + S + G P ++
Sbjct: 684 YIYPSSLPGVFPDIPNCRCIQNVFDLPTMDGLEPYVGLVEGVHLGA---SALAGFPSLK 739
>gi|67902396|ref|XP_681454.1| hypothetical protein AN8185.2 [Aspergillus nidulans FGSC A4]
gi|40740017|gb|EAA59207.1| hypothetical protein AN8185.2 [Aspergillus nidulans FGSC A4]
Length = 1699
Score = 311 bits (798), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 180/437 (41%), Positives = 253/437 (57%), Gaps = 76/437 (17%)
Query: 1 MGVPAFYRWLADRYP-LSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGI 59
MGVP F+RWL++RYP +S++ P EFDNLYLDMNGI
Sbjct: 1 MGVPKFFRWLSERYPAISMLIAENRIP---------------------EFDNLYLDMNGI 39
Query: 60 IHPCFHPDGKPAPT---SYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQR 116
IH C H D +PT + D +F +IF+YI+H++ ++P+KL ++A+DGVAPRAKMNQQR
Sbjct: 40 IHNCTHKDSD-SPTFRMTEDKMFIAIFNYIEHLYGKIKPKKLFFMAVDGVAPRAKMNQQR 98
Query: 117 TRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQ 176
RRFR A DA +A KE A + KE P DSN ITPGT+FMA L+ L+
Sbjct: 99 ARRFRTALDAEQA--------KEKAIAQGIEMPKEDP--FDSNCITPGTEFMAKLTEQLK 148
Query: 177 YFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDAD 236
YFI ++++ WQ +++LS VPGEGEHKIM YIR + PG+DPN RHCLYGLDAD
Sbjct: 149 YFISKKISEDKDWQGVEIVLSGHEVPGEGEHKIMEYIRHAKAQPGYDPNVRHCLYGLDAD 208
Query: 237 LIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTP 296
LIML L +H+ HF +LRE +T Q +K KP +
Sbjct: 209 LIMLGLLSHDPHFCLLREEVTFGRQVQK----------------KPKE------------ 240
Query: 297 IHKKKYQFLNIWVLREYLQYELDIPNPP----FPINFERIVDDFVFLCFFVGNDFLPHMP 352
+ + + L++ ++REYLQ E FP FER++DDF+ + FFVGNDFLP++P
Sbjct: 241 LEHQNFYLLHLCMVREYLQLEFQELEEEGIIDFPYEFERVIDDFILMAFFVGNDFLPNLP 300
Query: 353 TLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQ 412
L I EGA++L+ VY+ MGGY+ + G + L R+ + +++ E + F+
Sbjct: 301 NLHINEGALSLMFKVYKEVLPKMGGYINEQGTINLQRLGVLLDALSHVEYRFFEA----- 355
Query: 413 QAYEYNEAMKLNARRES 429
EY++A + A++ +
Sbjct: 356 ---EYSDATWMRAKQSA 369
Score = 168 bits (426), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 92/239 (38%), Positives = 134/239 (56%), Gaps = 9/239 (3%)
Query: 451 YKERYYADKFE--ISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPF 508
+K++YY +KF + N EE+ K+ ++ YV+GL WV YYY+ + SW WF+ HYAP
Sbjct: 508 WKDKYYMEKFGWGLDNHEEMRKLTEN----YVQGLQWVLFYYYRGIASWPWFFNSHYAPM 563
Query: 509 ASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPD 568
SD+K + ++ F LG PFRP+DQLMG LP S +P+ Y +LM+ P SPI FYP D
Sbjct: 564 ISDVKKGLNADMNFRLGRPFRPYDQLMGVLPDRSKKIVPKAYHDLMSSPDSPIIDFYPRD 623
Query: 569 FQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVHPQHPL 628
F++DMNGK+ W+ VVK+PFIDE+ LL E LT EE RN + L + +
Sbjct: 624 FELDMNGKKMEWEAVVKIPFIDERRLLDALATREHLLTPEEKARNGFGVSLKFTYSPDTE 683
Query: 629 YQQITLYCQLYHQLPPQDRFAWEIDVNASGGMNGYIWLCERNGLRSIIPSPVKGLPDIE 687
Y + ++ +P D+ G+ Y+ L E L + S + G P ++
Sbjct: 684 YIYPSSLPGVFPDIPNCRCIQNVFDLPTMDGLEPYVGLVEGVHLGA---SALAGFPSLK 739
>gi|440299483|gb|ELP92037.1| 5'->3' exoribonuclease, putative [Entamoeba invadens IP1]
Length = 661
Score = 311 bits (798), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 205/624 (32%), Positives = 310/624 (49%), Gaps = 84/624 (13%)
Query: 1 MGVPAFYRWLADR---YPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMN 57
MGVP+F+ W+ Y + ++ED D+ + N G +FD ++D N
Sbjct: 1 MGVPSFFAWVCSMCKDYTKYLPKNIQED------------DLREQNHCGRDFDTFFIDFN 48
Query: 58 GIIHPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRT 117
GI+H C HP AP S ++F IF +DH VRPRKL+Y+A+DGV P AK+ QQR
Sbjct: 49 GIVHNCSHPAHDVAPVSEAELFDRIFAQLDHYINYVRPRKLVYIAVDGVCPFAKIVQQRK 108
Query: 118 RRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQY 177
RR+ +A+ + + DSN ITPGT FM LS AL
Sbjct: 109 RRYISARGNSGT-------------------------SFDSNCITPGTPFMERLSVALHA 143
Query: 178 FIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADL 237
++ R++ W VILS+ NVPGEGEHKI ++R + F N +HC+YG+DADL
Sbjct: 144 YVTNRMDTNLYWSSLSVILSNPNVPGEGEHKIFDFLRKESKNTDF-ANLKHCVYGMDADL 202
Query: 238 IMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPI 297
IML+LA++ I+RE + C VC + H + HGKP N + P
Sbjct: 203 IMLTLASNLPFVYIIREEMEFTKPNIICDVC-HLNHRTNQ-HGKP------VNLILCDP- 253
Query: 298 HKKKYQFLNIWVLREYLQY-ELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEI 356
L+ W++ E + E+ + + I+ +++DFV + F VGNDFLP +P+L++
Sbjct: 254 -----NVLSTWLITECAKTCEMKMED----ISRVELINDFVLITFLVGNDFLPKIPSLKV 304
Query: 357 REGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRI----Q 412
+ G + +++ Y F G LT+ + L +++ + E ++ + R Q
Sbjct: 305 QSGGMEIILKYYWPLFKE-GKRLTNGININLHLLKEMFAKITTEESELLKMVVRTTKKSQ 363
Query: 413 QAYEYNEAMKLNARRESSEELLQAPVAVADTVKLGEPGYKERYYADKFEISNPEEIDKVK 472
+ +Y+ + ++ ADT+ + GY RYY F +N E
Sbjct: 364 EVKQYDAGLYFDS---------------ADTIMIHTQGYHTRYYDTHFGKANNTE--NFY 406
Query: 473 KDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDL--EITFFLGEPFRP 530
K +V +Y+EGL WV +YY V SW+WFYP HYAPFA D+ DL E F EP P
Sbjct: 407 KQIVGEYIEGLFWVFQYYTVGVPSWRWFYPEHYAPFAEDIYKYIDLNQEGLFEPDEPILP 466
Query: 531 FDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFID 590
+QL+ LP S + +P +L+ SPI ++ F+ D+NG+ ++GV +L FID
Sbjct: 467 MEQLISVLPPQSFNNIPSTLASLVVSKQSPILNYFNTTFRTDINGEAKLFKGVPQLDFID 526
Query: 591 EKLLLRQTKKLEVFLTEEELFRNS 614
+ + L E+ RNS
Sbjct: 527 LSKIEELVAERMAELKGREMRRNS 550
>gi|440792617|gb|ELR13826.1| exoribonuclease, putative [Acanthamoeba castellanii str. Neff]
Length = 1110
Score = 311 bits (798), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 162/305 (53%), Positives = 208/305 (68%), Gaps = 7/305 (2%)
Query: 112 MNQQRTRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVL 171
MNQQR+RRF+A K++ E +E + +E GK + KE DSN ITPGT FMA +
Sbjct: 1 MNQQRSRRFKAIKESKEKAEKEAEIVQEMIRMGKEIPPKEDKPHFDSNTITPGTPFMAKV 60
Query: 172 SAALQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLY 231
+ +LQY+I+ RL PGW+ KVILSDA+VPGEGEHKIM YIR QR+ P ++PNT H LY
Sbjct: 61 AQSLQYYIKERLLTDPGWKGIKVILSDASVPGEGEHKIMDYIRYQRSQPEYEPNTSHVLY 120
Query: 232 GLDADLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNG 291
GLDADLIML+LATHE HF ILRE++ + + CF+CGQ GHLA++C GK + N
Sbjct: 121 GLDADLIMLALATHEPHFFILREIV-MQANENNCFICGQPGHLASDCQGKAKEK---GND 176
Query: 292 VDDTPIHKKKYQFLNIWVLREYLQYELDIPNP---PFPINFERIVDDFVFLCFFVGNDFL 348
D +K +QFL + VLREYL +L PF + ERI+DDFVF+CFFVGNDFL
Sbjct: 177 TDTKAAIRKPFQFLYVSVLREYLTRDLKPSQAQQLPFEFDLERIIDDFVFMCFFVGNDFL 236
Query: 349 PHMPTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKR 408
PH+PTLEIRE AI++L+ +Y+R +GGYLT GEV L RV+ ++ V ED I +R
Sbjct: 237 PHLPTLEIRENAIDMLVRIYKRILPTLGGYLTHDGEVDLRRVKVLMEEVGRLEDSILVER 296
Query: 409 TRIQQ 413
R +Q
Sbjct: 297 RRKEQ 301
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 118/289 (40%), Positives = 156/289 (53%), Gaps = 41/289 (14%)
Query: 440 VADTVKLGEPGYKERYYADKF--EISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSW 497
+ D V+LG+PG+KERYY KF EI++ E I KV ++Y EGL WV RYYYQ SW
Sbjct: 417 IPDDVRLGDPGWKERYYKLKFDVEITDKEFIKKV----AMEYTEGLVWVLRYYYQGCSSW 472
Query: 498 QWFYPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDP 557
WFYP+HYAPFA D+ + D LG+PF+PF+QLMG LPA S + LP K + +M P
Sbjct: 473 GWFYPFHYAPFADDMTLIDDESPKHELGKPFKPFEQLMGVLPAESGTCLPMKCQVMMRHP 532
Query: 558 SSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVML 617
SPI FYP DF +DMNGKR+AWQ V LPFIDE L K+ E + EE RN +
Sbjct: 533 QSPIIDFYPNDFALDMNGKRWAWQAVALLPFIDENRLKEVMKECEPHFSAEEQERNKLGN 592
Query: 618 DLLYVHPQHPL--------------------------YQQITLYCQLYHQLPPQDRFAWE 651
L++VH HPL Y T + +P D+ E
Sbjct: 593 HLIFVHASHPLASTFKALEDDSLAPAAATPAEGDSVAYLSATPQEETKSAVPSNDQEPIE 652
Query: 652 -------IDVNASGGMNGYIWLCER--NGLRSIIPSPVKGLPDIERNQA 691
I + SGG+ G++ E+ + I SP+ +PD++ NQ+
Sbjct: 653 HMGKKLPIPADLSGGLTGFLSRTEKFSTPIGGTIQSPLNVMPDVKNNQS 701
>gi|449330168|gb|AGE96430.1| ribonucleic trafficking protein 1 [Encephalitozoon cuniculi]
Length = 655
Score = 311 bits (798), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 215/672 (31%), Positives = 318/672 (47%), Gaps = 99/672 (14%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP+ +RWL + +I ++E+ P VD LYLD N II
Sbjct: 1 MGVPSLFRWLQLSHKETIHSIMEK-PSVDA---------------------LYLDFNAII 38
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
H C P D++K++ D+IDHI L RPRKLLY+A+DGVAPRAK++ QR RR+
Sbjct: 39 HTCIKPGLGSEEEIERDLYKTVGDFIDHILLKTRPRKLLYIAVDGVAPRAKLSHQRARRY 98
Query: 121 RAAKDAAE-----------------AEAEEERLRKEFEEAGKL--------------LSA 149
++A E +E ++E +EF L L+
Sbjct: 99 KSALGKKEGSAVIAAAKTDPTMSSPSEKKDEIPNEEFTGESSLYDKFIAEDPSESSSLAI 158
Query: 150 KEKPETCDSNVITPGTQFMAVLSAALQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKI 209
+ E D N ITPGT FM L L +IQ +L+ P ++I S VPGEGE KI
Sbjct: 159 DVETEKFDLNCITPGTPFMERLHKVLISYIQCKLSSDPEVSNLRIIYSSYLVPGEGEQKI 218
Query: 210 MSYIRLQRNLPGFDPNTRHCLYGLDADLIMLSLATHEIHFSILREVITLPGQQEK--CFV 267
MS+IR Q ++ N H +Y D DLI L L+ I+R+ + ++ K C
Sbjct: 219 MSFIRSQGSIAR---NDVHMIYSPDGDLIFLGLSLQRNRVLIMRDYFSPSKERRKRTCTK 275
Query: 268 CGQVGHLAAECHGKPGDNPADWNGVDDTPIHKKKYQFLNIWVLREYLQYELDIPNPPFPI 327
CG+ GH EC GV + ++NI LR L E +
Sbjct: 276 CGRTGHSDEEC------------GV----FTNYHFVYVNISELRTRLIREFR-RHTAQRF 318
Query: 328 NFERIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLL 387
+ ERI+DD++FLCF +GNDF+P +P L+IR +I + + + F+ M Y+T +
Sbjct: 319 SEERILDDWIFLCFLLGNDFVPPIPCLDIRFHSIETITEIMMKSFSEMKSYITCNKMINY 378
Query: 388 DRVEKFIQSVAVYEDQIFQKRTRIQQAYEYNEAMKLNARRESSEELLQAPVAVADTVKLG 447
+ F +A ED ++ +++ Q ++ E +K P V + + +
Sbjct: 379 QALRNFYAILASKEDALYHRKS--QSLDKFREGLK------------GMPRIVYEKIPIH 424
Query: 448 EPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAP 507
K +YY K + +I K++ +YV+GL WV YY W W+YPYH+AP
Sbjct: 425 TKTGKVQYYTSKLNATTESDI----KNICYEYVKGLYWVYSYYVLGWTGWDWYYPYHFAP 480
Query: 508 FASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYK-FYP 566
A+DL LS +I G P RP +QL+ LP S +PE + + D YK +YP
Sbjct: 481 LAADLSKLSINDIQISPGHPLRPLEQLLVVLPPMSRGMVPEGLQPIFDD-----YKDYYP 535
Query: 567 PDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVHPQH 626
D + DM K + WQ +V LPF+D + +L + L E+L RN LDLL+ +
Sbjct: 536 EDVKTDMFDKVYLWQEIVLLPFMDFRPILSENAVKFNTLGYEDLSRNLRSLDLLFTTDKK 595
Query: 627 PLYQQITLYCQL 638
+ +Y +L
Sbjct: 596 SSEVILGMYSKL 607
>gi|430814593|emb|CCJ28201.1| unnamed protein product [Pneumocystis jirovecii]
Length = 1318
Score = 311 bits (798), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 167/411 (40%), Positives = 238/411 (57%), Gaps = 68/411 (16%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MG+P F+RW+++RYP+ + E K P EFDNLYLDMNGII
Sbjct: 1 MGIPKFFRWISERYPMCSQLITE-----------------KRVP---EFDNLYLDMNGII 40
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
H C H D ++ F +IF YI+H+F ++P+KL +L++DGVAPRAKMNQQR+RRF
Sbjct: 41 HNCTHMDENKKEIPENEAFLAIFKYIEHLFGTIKPKKLFFLSVDGVAPRAKMNQQRSRRF 100
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPET-CDSNVITPGTQFMAVLSAALQYFI 179
+AAK+A E E K+ ++ P+ DSN ITPGT FM LS L+YFI
Sbjct: 101 KAAKEAYELYQE------------KISKGEDVPKDPFDSNCITPGTLFMKRLSEQLKYFI 148
Query: 180 QARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIM 239
++++ W+ ++I S VPGEGEHKIM YIRL + P ++PN RHCLYGLDADLIM
Sbjct: 149 NRKVSEDTNWKGIEIIFSGHEVPGEGEHKIMEYIRLSKAQPDYEPNLRHCLYGLDADLIM 208
Query: 240 LSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIHK 299
L L +H+ HF +LRE + ++K + +
Sbjct: 209 LGLLSHDPHFCLLREEVLFGSVKKK-----------------------------KQELEE 239
Query: 300 KKYQFLNIWVLREYLQYEL----DIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLE 355
+ + +++ +LREYL+ E +IPN FP NFE+I+DDF+ L FFVGNDFLPH+P L
Sbjct: 240 QNFYLMHLCLLREYLEMEFQELTNIPN--FPYNFEKIIDDFILLAFFVGNDFLPHLPKLH 297
Query: 356 IREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQ 406
I EGA+ L+ +Y++ GY+ +AG + L+R+ ++ + E + F+
Sbjct: 298 INEGALALVFKIYKKVIPKARGYINNAGVINLERLALVLEELEKQEREDFR 348
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 75/178 (42%), Positives = 115/178 (64%), Gaps = 6/178 (3%)
Query: 451 YKERYYADK--FEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPF 508
+K+ YY +K F I++ +++ K++ Y+EGL WV YYY+ V SW WFY YHY+P
Sbjct: 477 WKDSYYIEKLGFSINDTKKL----KEMAENYIEGLQWVLFYYYRGVSSWSWFYKYHYSPK 532
Query: 509 ASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPD 568
SD+K ++F LG PF+PF+QLM LP S +P+ + +LM + +SPI FYP D
Sbjct: 533 VSDIKKGFAANLSFTLGTPFKPFEQLMAVLPERSKKLVPKPFADLMVNETSPIRDFYPED 592
Query: 569 FQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVHPQH 626
F++DMN K+ +W+ + K+PFI+E+LLL K E LT+EE RN+ ++ Y + ++
Sbjct: 593 FELDMNDKKASWEAIAKIPFINEELLLSVIKAKEHLLTDEEKNRNTFGHNIKYTYDEN 650
>gi|340959829|gb|EGS21010.1| 5'-3' exoribonuclease 1-like protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 1461
Score = 311 bits (797), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 173/397 (43%), Positives = 240/397 (60%), Gaps = 64/397 (16%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP F+RWL++RYP +I ++ E+ EFD LYLDMNGII
Sbjct: 1 MGVPKFFRWLSERYP-AISQLIAEN-------------------RIPEFDCLYLDMNGII 40
Query: 61 HPCFHPDGKPAP--TSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C H D + +++F +IF+YI+H+F ++P+KL ++A+DGVAPRAKMNQQR R
Sbjct: 41 HNCTHKDVDDVHFRLTEEEMFIAIFNYIEHLFGKIKPKKLFFMAVDGVAPRAKMNQQRAR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RFR A DA ER R++ GK L K E DSN ITPGT+FMA LS L+YF
Sbjct: 101 RFRTALDA-------ERAREKALREGKELP---KEEPFDSNCITPGTEFMAKLSLQLKYF 150
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
I ++++ WQ +++LS VPGEGEHKIM YIR R P ++PNTRHCLYGLDADLI
Sbjct: 151 INKKVSEDRDWQGPEIVLSGHEVPGEGEHKIMEYIRNARAQPDYNPNTRHCLYGLDADLI 210
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
ML L +H+ HF +LRE +T G+Q K H + E +
Sbjct: 211 MLGLLSHDPHFCLLREEVTF-GRQAK--------HKSKE-------------------LE 242
Query: 299 KKKYQFLNIWVLREYLQYEL-DIPNP---PFPINFERIVDDFVFLCFFVGNDFLPHMPTL 354
+ + L++ ++REYL+ E ++ P PFP + ER++DDF+ + FFVGNDFLP++P L
Sbjct: 243 HQNFYLLHLCIVREYLELEFQELKEPGAIPFPFDMERVIDDFILMAFFVGNDFLPNLPRL 302
Query: 355 EIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVE 391
I EGA+ L+ +Y++ GY+ + G+V LDR++
Sbjct: 303 HINEGALALMFKIYKKVLPKCDGYINENGKVNLDRLK 339
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 91/216 (42%), Positives = 128/216 (59%), Gaps = 8/216 (3%)
Query: 410 RIQQAYEYNEAMKLNARRESSEELLQAPVAVADTVKLGEPGYKERYYADKFEISNPEEID 469
RI + Y+ + + L SSEE A AV + K +K++YY K + P+ ++
Sbjct: 471 RIAKRYDNAQVLDL-----SSEE---AKAAVQEKYKQKFQEWKDKYYLSKMDGWTPQNLE 522
Query: 470 KVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDLEITFFLGEPFR 529
+ K + YV+GL WV YYY+ + SW WFY YHYAP SD+ ++ F LG+PFR
Sbjct: 523 QELKKMAENYVQGLQWVLYYYYRGIASWPWFYGYHYAPMISDVVKGLGADLNFKLGQPFR 582
Query: 530 PFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFI 589
P +QLMG LP S +P+ Y +LMTDP+SPI FYP +F++D+NGK+ W+ VVK+PFI
Sbjct: 583 PNEQLMGVLPDRSKKIVPKVYWDLMTDPNSPIIDFYPREFELDLNGKKMDWEAVVKIPFI 642
Query: 590 DEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVHPQ 625
DEK LL LTEEE RN + L + + +
Sbjct: 643 DEKRLLEAMAPRNALLTEEEKARNEFGVPLKFTYSE 678
>gi|345569898|gb|EGX52724.1| hypothetical protein AOL_s00007g507 [Arthrobotrys oligospora ATCC
24927]
Length = 1409
Score = 311 bits (796), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 170/416 (40%), Positives = 239/416 (57%), Gaps = 66/416 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP F+RW+++RYP +I ++ E+ EFD LYLDMNGII
Sbjct: 1 MGVPKFFRWMSERYP-AISQLIAEN-------------------RIPEFDALYLDMNGII 40
Query: 61 HPCFHPDGKPAPT---SYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRT 117
H C H D +PT + + +F +IF+YI+H+F ++P+K ++AIDGVAPRAKMNQQR
Sbjct: 41 HNCTHKDSD-SPTFRMTEEKMFIAIFNYIEHLFGKIKPKKTFFMAIDGVAPRAKMNQQRA 99
Query: 118 RRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQY 177
RRFR A D +A +++A K K + DSN ITPGT FMA LS L+Y
Sbjct: 100 RRFRTALDNEKA----------YQKAVKDGVEMPKEDPFDSNCITPGTGFMAKLSEQLKY 149
Query: 178 FIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADL 237
FI +++ WQ ++ILS VPGEGEHKIM YIRL + PG++PN RHCLYGLDADL
Sbjct: 150 FINKKVSDDAEWQGLEIILSGHEVPGEGEHKIMEYIRLTKAQPGYNPNLRHCLYGLDADL 209
Query: 238 IMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPI 297
IML L +H+ HF +LRE +T +K +
Sbjct: 210 IMLGLLSHDPHFCLLREEVTFGRNNQK----------------------------KSKEL 241
Query: 298 HKKKYQFLNIWVLREYLQYELDIPNPP----FPINFERIVDDFVFLCFFVGNDFLPHMPT 353
+ + +++ ++REYL+ E P P +FER++DDFV L FFVGNDFLPH+P
Sbjct: 242 EHQNFYLMHLSIVREYLELEFQELKEPGLLSVPYDFERVLDDFVLLAFFVGNDFLPHLPG 301
Query: 354 LEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRT 409
L I EGA++L+ +Y++ T GY+ D G+V L+ + + + +E ++F+ T
Sbjct: 302 LHINEGALSLMFKIYKKVLTKAKGYINDHGQVNLETLGLVLDEMEEFEYKVFETET 357
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 79/178 (44%), Positives = 108/178 (60%), Gaps = 6/178 (3%)
Query: 450 GYKERYYADKFE--ISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAP 507
+++ YY KF + + EE+ + + Y+EG+ WV YYY+ V SW WF+ YHYAP
Sbjct: 505 AWRDGYYKAKFGFGLDDTEEM----RGLAENYIEGIQWVLFYYYRGVASWGWFFRYHYAP 560
Query: 508 FASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPP 567
SD+K + F LG PFRPF+QLMG LP S +PE Y LMT P SPI FYP
Sbjct: 561 KISDVKKGLGANLNFRLGSPFRPFEQLMGVLPDRSKKIVPEPYHVLMTSPDSPILDFYPR 620
Query: 568 DFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVHPQ 625
DF++DMNGK+ W+ VVK+PFI E LL + E LT++E+ RN + L + + +
Sbjct: 621 DFELDMNGKKQDWEAVVKIPFIQEDRLLAAMRTREHLLTKDEISRNGFGITLKFTYSE 678
>gi|85014269|ref|XP_955630.1| 5-3 exoribonuclease [Encephalitozoon cuniculi GB-M1]
gi|19171324|emb|CAD27049.1| RIBONUCLEIC TRAFFICKING PROTEIN 1 (5'3'exoribonuclease)
[Encephalitozoon cuniculi GB-M1]
Length = 655
Score = 311 bits (796), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 215/672 (31%), Positives = 318/672 (47%), Gaps = 99/672 (14%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP+ +RWL + +I ++E+ P VD LYLD N II
Sbjct: 1 MGVPSLFRWLQLSHKETIHSIMEK-PSVDA---------------------LYLDFNAII 38
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
H C P D++K++ D+IDHI L RPRKLLY+A+DGVAPRAK++ QR RR+
Sbjct: 39 HTCIKPGLGSEEEIERDLYKTVGDFIDHILLKTRPRKLLYIAVDGVAPRAKLSHQRARRY 98
Query: 121 RAAKDAAE-----------------AEAEEERLRKEFEEAGKL--------------LSA 149
++A E +E ++E +EF L L+
Sbjct: 99 KSALGKKEGSAVIAAAKADPTMSSPSEKKDEIPNEEFTGESSLYDKFIAEDPSESSSLAI 158
Query: 150 KEKPETCDSNVITPGTQFMAVLSAALQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKI 209
+ E D N ITPGT FM L L +IQ +L+ P ++I S VPGEGE KI
Sbjct: 159 DVETEKFDLNCITPGTPFMERLHKVLISYIQCKLSSDPEVSNLRIIYSSYLVPGEGEQKI 218
Query: 210 MSYIRLQRNLPGFDPNTRHCLYGLDADLIMLSLATHEIHFSILREVITLPGQQEK--CFV 267
MS+IR Q ++ N H +Y D DLI L L+ I+R+ + ++ K C
Sbjct: 219 MSFIRSQGSIAR---NDVHMIYSPDGDLIFLGLSLQRNRVLIMRDYFSPSKERRKRTCTK 275
Query: 268 CGQVGHLAAECHGKPGDNPADWNGVDDTPIHKKKYQFLNIWVLREYLQYELDIPNPPFPI 327
CG+ GH EC GV + ++NI LR L E +
Sbjct: 276 CGRTGHSDEEC------------GV----FTNYHFVYVNISELRTRLIREFR-RHTAQRF 318
Query: 328 NFERIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLL 387
+ ERI+DD++FLCF +GNDF+P +P L+IR +I + + + F+ M Y+T +
Sbjct: 319 SEERILDDWIFLCFLLGNDFVPPIPCLDIRFHSIETITEIMMKSFSEMKSYITCNKMINY 378
Query: 388 DRVEKFIQSVAVYEDQIFQKRTRIQQAYEYNEAMKLNARRESSEELLQAPVAVADTVKLG 447
+ F +A ED ++ +++ Q ++ E +K P V + + +
Sbjct: 379 QALRNFYAILASKEDGLYHRKS--QSLDKFREGLK------------GMPRIVYEKIPIH 424
Query: 448 EPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAP 507
K +YY K + +I K++ +YV+GL WV YY W W+YPYH+AP
Sbjct: 425 TKTGKVQYYTSKLNATTESDI----KNICYEYVKGLYWVYSYYVLGWTGWDWYYPYHFAP 480
Query: 508 FASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYK-FYP 566
A+DL LS +I G P RP +QL+ LP S +PE + + D YK +YP
Sbjct: 481 LAADLSKLSINDIQISPGHPLRPLEQLLVVLPPMSRGMVPEGLQPIFDD-----YKDYYP 535
Query: 567 PDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVHPQH 626
D + DM K + WQ +V LPF+D + +L + L E+L RN LDLL+ +
Sbjct: 536 EDVKTDMFDKVYLWQEIVLLPFMDFRPILSENAVKFNTLGYEDLSRNLRSLDLLFTTDKK 595
Query: 627 PLYQQITLYCQL 638
+ +Y +L
Sbjct: 596 SSEVILGMYSKL 607
>gi|399216467|emb|CCF73155.1| unnamed protein product [Babesia microti strain RI]
Length = 1209
Score = 311 bits (796), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 216/623 (34%), Positives = 302/623 (48%), Gaps = 81/623 (13%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGV F+R++A+RYPL + + D + P FD LYLDMNGI+
Sbjct: 1 MGVGHFFRYIAERYPLICQQISRSFSDNEAALSEFYSDSTLP------FDALYLDMNGIV 54
Query: 61 HPCFHPDGKPAP--TSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C + + + + +S D++ SIF YI I L +P+KLLYLA+DGVAP+AKMNQQRTR
Sbjct: 55 HICAYSNKEFSRDISSLGDIWLSIFQYITKIVNLAKPKKLLYLAVDGVAPKAKMNQQRTR 114
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RFR+ ++ + E K F + D ITPGT+FM + ++ +
Sbjct: 115 RFRSVAESEQRANLNEECAKYFANGYDDPVRGKDGFVFDPTCITPGTKFMHEFTTQIEKY 174
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
+ + W KVI+S ANVPGEGEHKI YI RN G + HC+YGLDADLI
Sbjct: 175 VAKMIKADTYWSKLKVIVSGANVPGEGEHKIAEYI---RNTKGQSIKS-HCIYGLDADLI 230
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
MLSL HE H +LRE I + + P D N V
Sbjct: 231 MLSLLFHEPHICLLRESIIFTNMMKNNITYRLL--------------PKDDNFV------ 270
Query: 299 KKKYQFLNIWVLREYLQYEL---DIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLE 355
L+I VLREYL EL + PF R +DDF+ +C VGNDFLPH+ ++
Sbjct: 271 -----LLHIRVLREYLARELLPVHMLKEPF---ISRAIDDFILICLLVGNDFLPHLKFVQ 322
Query: 356 IREGAINLLMHVYRREF--TAMGGYLT-DAGEVLLDRVEKFIQSVA-VYEDQIFQKRTRI 411
I + +LM +YR +LT D GE+ L F+ V QI +K +
Sbjct: 323 IPNRGLTILMKLYREHVGKNQKNPWLTIDCGEIDLRNFCNFLDKYCRVETKQILEK---L 379
Query: 412 QQAYEYNEAMKLNARRE------SSEELLQAPVAVADTVKLGEPGYKERYYADKFEISNP 465
+ E+ + AR + + + P D + RYY K +++
Sbjct: 380 RDPNEHKPTLIDTARHKIEKDYTTYSRMFPKPATTPDQ-------WASRYYYAKMGLTD- 431
Query: 466 EEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDL------------- 512
++ ++++V +Y+ G+ WV YYY+ V W W+ P Y P A D+
Sbjct: 432 ---EQSREEIVKQYLIGIQWVLYYYYRCVPDWNWYLPCPYPPLAQDMSKILKRTIQKTEC 488
Query: 513 KDLSD-LEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQI 571
K LS L I F LG P PF+QL+ LP SS LP++ L+TDP S + ++P F +
Sbjct: 489 KRLSKALGIKFELGHPCTPFEQLLSVLPPKSSYLLPKQLEALITDPKSGLESYFPTQFDV 548
Query: 572 DMNGKRFAWQGVVKLPFIDEKLL 594
DM+ W GV LP ID L+
Sbjct: 549 DMDDTLVPWGGVTLLPTIDPTLI 571
>gi|403414808|emb|CCM01508.1| predicted protein [Fibroporia radiculosa]
Length = 1961
Score = 311 bits (796), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 180/455 (39%), Positives = 255/455 (56%), Gaps = 70/455 (15%)
Query: 3 VPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGIIHP 62
+P F+R++++RYPL+ +++E+ EFDNLY+D NGIIH
Sbjct: 17 IPKFFRYISERYPLT-SQLIQENKIP-------------------EFDNLYVDFNGIIHN 56
Query: 63 CFHPDGKPAP--TSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
C HP+ A S + +F SIF Y+DH+F ++P+KL ++AIDGVAPRAKMNQQR+RRF
Sbjct: 57 CSHPNDGDAHFRLSEEQIFTSIFAYVDHLFGKIKPKKLFFMAIDGVAPRAKMNQQRSRRF 116
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPET--CDSNVITPGTQFMAVLSAALQYF 178
R AK+A E +R++ E G+ L P+T DSN ITPGT+FMA LSA LQYF
Sbjct: 117 RTAKEARE-------VREKAESKGEKL-----PDTKAFDSNCITPGTEFMAKLSAQLQYF 164
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
+ ++++ W V+LS +VPGEGEHKIM YIRL R P +DPN RHCLYGLDADLI
Sbjct: 165 VNKKISEDANWSDVTVVLSGHDVPGEGEHKIMEYIRLSRAQPDYDPNVRHCLYGLDADLI 224
Query: 239 MLSLATHEIHFSILREVITL-PGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPI 297
ML L +H+ HF +LRE + P + K G +
Sbjct: 225 MLGLLSHDPHFCLLREEVKFGPASRSK--------------------------GSKSASL 258
Query: 298 HKKKYQFLNIWVLREYLQYEL--DI-PNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTL 354
+ L++ ++REYL E DI P PF + E I+DDF+ L FVGNDFLP++P L
Sbjct: 259 ESINFYLLHLTLMREYLDLEFFHDIEPVLPFSYSLEHIIDDFILLAVFVGNDFLPNLPDL 318
Query: 355 EIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQA 414
I E + L VY++ ++ GYL ++G + R++ + +A +E +IF+K
Sbjct: 319 HIHENGLEKLFDVYKKSLPSLDGYLNESGVINTKRLQVILDEMAEWEREIFEKEYADLNW 378
Query: 415 YEYNEAMKL----NARRESSEELLQAPVAVADTVK 445
Y+ +A + R+ S L + + D VK
Sbjct: 379 YKGKQAKHVKEMETGRKRSKLILTKTQREIFDQVK 413
Score = 152 bits (383), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 74/167 (44%), Positives = 103/167 (61%), Gaps = 4/167 (2%)
Query: 452 KERYYADKFEISNPEEIDKVKKDVVLKYVEG----LCWVCRYYYQDVCSWQWFYPYHYAP 507
KE + ++E+S +++D+ K++ + WV YYY V SW WFY YHYAP
Sbjct: 536 KEGDFDARYEMSIKDKMDEWKRNYYKACPSASDIWMQWVMHYYYSGVASWSWFYNYHYAP 595
Query: 508 FASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPP 567
SDLK + + F LG PFRPF+QLMG LP AS +P YR LM D +SPI FYP
Sbjct: 596 RISDLKGVDQMSFQFDLGTPFRPFEQLMGVLPEASKELIPPAYRELMFDVNSPILDFYPQ 655
Query: 568 DFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNS 614
+F++D+NGK+ W+ +VK+PFID+ LL + E LT++E RN+
Sbjct: 656 EFELDLNGKKQDWEAIVKIPFIDQDRLLSAMRSREHRLTKDERHRNA 702
>gi|193784826|dbj|BAG53979.1| unnamed protein product [Homo sapiens]
Length = 805
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 185/538 (34%), Positives = 270/538 (50%), Gaps = 81/538 (15%)
Query: 168 MAVLSAALQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTR 227
MA L L+YF+ +++ WQ + S PGEGEHKIM +IR ++ P DPNTR
Sbjct: 1 MARLHEHLKYFVNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTR 60
Query: 228 HCLYGLDADLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPA 287
HCLYGLDADLIML L +HE HFS+LRE + G++ + VC
Sbjct: 61 HCLYGLDADLIMLGLTSHEAHFSLLREEVRFGGKKTQR-VCAP----------------- 102
Query: 288 DWNGVDDTPIHKKKYQFLNIWVLREYLQYELDI--PNPPFPINFERIVDDFVFLCFFVGN 345
++T H L++ ++REY+ YE + F + ERI+DD++ + F VGN
Sbjct: 103 -----EETTFH-----LLHLSLMREYIDYEFSVLKEKITFKYDIERIIDDWILMGFLVGN 152
Query: 346 DFLPHMPTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIF 405
DF+PH+P L I A+ LL Y +GGY+ ++G + L R EK++ ++ ++ + F
Sbjct: 153 DFIPHLPHLHINHDALPLLYGTYVTILPELGGYINESGHLNLPRFEKYLVKLSDFDREHF 212
Query: 406 QK--------RTRIQQAY-------------EYNEAMKLNARRES--------------- 429
+ +++ Y Y E KL + S
Sbjct: 213 SEVFVDLKWFESKVGNKYLNEAAGVAAEEARNYKEKKKLKGQENSLCWTALDKNEGEMIT 272
Query: 430 SEELLQAPVAVADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRY 489
S++ L+ D + YK YY K + D D YV+ + W+ Y
Sbjct: 273 SKDNLEDETEDDDLFETEFRQYKRTYYMTKMGVDVVS--DDFLADQAACYVQAIQWILHY 330
Query: 490 YYQDVCSWQWFYPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEK 549
YY V SW W+YPYHYAPF SD+ ++S L+I F LG+PF+PF+QL+ LPAAS + LP
Sbjct: 331 YYHGVQSWSWYYPYHYAPFLSDIHNISTLKIHFELGKPFKPFEQLLAVLPAASKNLLPAC 390
Query: 550 YRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEE 609
Y++LMT+ SPI ++YPPDF+ D+NGK+ W+ VV +PFIDEK LL + L +EE
Sbjct: 391 YQHLMTNEDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEE 450
Query: 610 LFRNSVM----------LDLLYVHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVNAS 657
RN + +Y P + I C Y + AW +D+N +
Sbjct: 451 RKRNQHSECLMCWYDRDTEFIYPSPWPEKFPAIERCCTRYKIISLD---AWRVDINKN 505
>gi|403367227|gb|EJY83428.1| 5'-3' exonuclease [Oxytricha trifallax]
Length = 1484
Score = 310 bits (794), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 181/421 (42%), Positives = 243/421 (57%), Gaps = 71/421 (16%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MG+P F+RWL RYPL + +V +E+ P+D NLYLD+NGI+
Sbjct: 1 MGIPKFFRWLTRRYPLILQNVQKEED-------CPPID------------NLYLDLNGIV 41
Query: 61 HPCFHPD--GKPAPTS----YDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQ 114
H C H + K S +D+V+ SI ID I V+P+KLL+LA+DGVAPRAKMNQ
Sbjct: 42 HNCIHGNDPSKHEKVSKMEDFDEVWVSIMRAIDEIVHSVKPKKLLFLAVDGVAPRAKMNQ 101
Query: 115 QRTRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAA 174
QR RRFR+AK+A E+ E+LR+E KE PE D+N I+PGTQFM L
Sbjct: 102 QRARRFRSAKEAFESR---EQLRQE---------GKEAPELFDTNAISPGTQFMFELCKQ 149
Query: 175 LQYFIQARLNQIPGWQ-FTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGL 233
L +F+Q + N P +Q +VI+SD ++PGEGEHK+M +IR + P +DPNTRHC YG
Sbjct: 150 LHFFVQYKTNVDPLYQNLAQVIVSDGSIPGEGEHKMMDFIRQAKQSPQYDPNTRHCFYGA 209
Query: 234 DADLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVD 293
DADLIMLSL THE HF I+RE E F + G GV
Sbjct: 210 DADLIMLSLLTHEPHFIIIRE--------EHIFKKSKQG------------------GV- 242
Query: 294 DTPIHKKK---YQFLNIWVLREYLQYELDIPNPPFPINF--ERIVDDFVFLCFFVGNDFL 348
I KKK +Q + I +LREY + E I F ERI+DDFVF CFF+GNDFL
Sbjct: 243 -QRIDKKKQVNFQIVYINLLREYFELEYKPLQSQMKIQFDLERIIDDFVFFCFFIGNDFL 301
Query: 349 PHMPTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKR 408
P + L+I EG+++ L+ +YR+ M Y+T++G + DR + FI+ + +E + F +R
Sbjct: 302 PSLSALDISEGSLDQLIKLYRKLLPQMDNYITESGTIYWDRAQPFIKMLGEHEHESFIER 361
Query: 409 T 409
Sbjct: 362 V 362
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/114 (37%), Positives = 64/114 (56%), Gaps = 18/114 (15%)
Query: 497 WQWFYPYHYAPFASDL------------KDLSDLEI---TFFLGEPFRPFDQLMGTLPAA 541
W+W+YPYHYAP SD+ K + D EI + EP+RPF QL+ LPA
Sbjct: 577 WRWYYPYHYAPMISDIDEDIVENYLKGSKVIGDFEIDENCSHINEPYRPFFQLLCILPAK 636
Query: 542 SSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLL 595
S LP++Y ++ + K++P DF ID+NG+ W+ V +PF++E L +
Sbjct: 637 SVKLLPQQYSEIIL---GVLRKYFPDDFTIDLNGRSLPWEAVCLIPFVEESLFI 687
>gi|440632608|gb|ELR02527.1| 5'-3' exoribonuclease 1 [Geomyces destructans 20631-21]
Length = 1388
Score = 310 bits (794), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 168/436 (38%), Positives = 242/436 (55%), Gaps = 64/436 (14%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP F+RW+++RYP +I ++ E+ EFDNLYLDMNGII
Sbjct: 1 MGVPKFFRWMSERYP-AISQLIAEN-------------------RIPEFDNLYLDMNGII 40
Query: 61 HPCFHPDGKPAP--TSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C H D A + + +F +IF+YI+H+F ++P KL ++AIDGVAPRAKMNQQR R
Sbjct: 41 HNCTHKDSDDATFRMTEEQMFIAIFNYIEHLFGKIKPHKLFFMAIDGVAPRAKMNQQRAR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RFR A D A + R KE K E DSN ITPGT+FMA L+ L+YF
Sbjct: 101 RFRTALDVENAREKAIREGKEMP----------KEEAFDSNCITPGTEFMAKLTEQLKYF 150
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
I ++++ WQ +++LS VPGEGEHKIM YIRL + P +D N RHCLYGLDADLI
Sbjct: 151 INKKVSEDTDWQGVEIVLSGHEVPGEGEHKIMEYIRLSKAQPDYDHNVRHCLYGLDADLI 210
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
ML L +H+ HF +LRE +T G+Q K +
Sbjct: 211 MLGLLSHDPHFCLLREEVTF-GRQSKA---------------------------KSKELE 242
Query: 299 KKKYQFLNIWVLREYLQYELDIPNPP----FPINFERIVDDFVFLCFFVGNDFLPHMPTL 354
+ + +++ ++REYL+ E P F + ER++DDF+ + FFVGNDFLP++P L
Sbjct: 243 HQNFYLMHLCIVREYLEIEFQELKEPGIMGFAFDLERVIDDFILMAFFVGNDFLPNLPNL 302
Query: 355 EIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQA 414
I EGA+ L+ +Y+ GGYL + G + + R+ ++ ++ E + F+ +
Sbjct: 303 HINEGALALMFKIYKSVLPKAGGYLNEGGVINMPRLAILLEELSHVEYRFFESENSDAKW 362
Query: 415 YEYNEAMKLNARRESS 430
++ + K++ + S
Sbjct: 363 FKGKQMAKVDVMEKGS 378
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 81/173 (46%), Positives = 104/173 (60%), Gaps = 2/173 (1%)
Query: 451 YKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFAS 510
+K++YY KFE E + K + YV+GL WV YYYQ V SW W+Y YHY+P S
Sbjct: 507 WKDKYYDGKFEWKRDNETELTK--LAENYVQGLQWVLYYYYQGVVSWPWYYAYHYSPMIS 564
Query: 511 DLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQ 570
D+ +I F LG+PF P++QLMG LP S +P Y LMTDP SPI FYP DF+
Sbjct: 565 DVIKGLKADINFKLGQPFHPYEQLMGVLPDRSKKIVPTVYHELMTDPKSPIIDFYPRDFE 624
Query: 571 IDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVH 623
+DMNGK+ W+ VVK+PFIDEK LL L++ E RN + L + H
Sbjct: 625 LDMNGKKMEWEAVVKIPFIDEKRLLSAMAPKNDMLSDAEKARNEFGVSLKFTH 677
>gi|119498925|ref|XP_001266220.1| exonuclease Kem1, putative [Neosartorya fischeri NRRL 181]
gi|119414384|gb|EAW24323.1| exonuclease Kem1, putative [Neosartorya fischeri NRRL 181]
Length = 1414
Score = 309 bits (792), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 191/484 (39%), Positives = 270/484 (55%), Gaps = 85/484 (17%)
Query: 1 MGVPAFYRWLADRYP-LSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGI 59
MGVP F+RWL++RYP +S++ P EFD LYLDMNGI
Sbjct: 1 MGVPKFFRWLSERYPTISMLIAENRIP---------------------EFDALYLDMNGI 39
Query: 60 IHPCFHPDGKPAPT---SYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQR 116
IH C H D +PT + D +F +IF+YI+H++ ++PRKL ++A+DGVAPRAKMNQQR
Sbjct: 40 IHNCTHKDSD-SPTFRMTEDKMFIAIFNYIEHLYGKIKPRKLFFMAVDGVAPRAKMNQQR 98
Query: 117 TRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQ 176
RRFR A DA A KE A + KE P DSN ITPGT+FMA L+ L+
Sbjct: 99 ARRFRTALDAEVA--------KEKAIAQGIEMPKEDP--FDSNCITPGTEFMAKLTQQLK 148
Query: 177 YFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDAD 236
YFI ++++ WQ ++LS VPGEGEHKIM YIR + PG+DPN RHCLYGLDAD
Sbjct: 149 YFINKKISEDKDWQGVDIVLSGHEVPGEGEHKIMEYIRHAKAQPGYDPNIRHCLYGLDAD 208
Query: 237 LIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTP 296
LIML L +H+ HF +LRE +T Q +K KP +
Sbjct: 209 LIMLGLLSHDPHFCLLREEVTFGRQVQK----------------KPKE------------ 240
Query: 297 IHKKKYQFLNIWVLREYLQYELDIPNPP----FPINFERIVDDFVFLCFFVGNDFLPHMP 352
+ + + L++ ++REYL+ E FP + ER++DDF+ + FFVGNDFLP++P
Sbjct: 241 LEHQNFYLLHLCMVREYLELEFQELEQEGVLDFPFDMERVIDDFILMAFFVGNDFLPNLP 300
Query: 353 TLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQ 412
L I EGA++L+ +Y+ MGGY+ + G + L R+ I++++ E + F+
Sbjct: 301 NLHINEGALSLMFKIYKDVLPKMGGYVNEGGVINLKRLGMLIEALSDVEFRFFEA----- 355
Query: 413 QAYEYNEAMKLNARR---ESSEELLQAPVAVADTVKLGEPGYKERYYA-DKFEISNPEEI 468
EY++A +NA+R E+ E + P + T P KE + K+ ++ PE+
Sbjct: 356 ---EYSDARWINAKRNGVENGSEFQEKPKGLTLT-----PAQKELFKEIKKYVLNRPEKA 407
Query: 469 DKVK 472
K
Sbjct: 408 SGSK 411
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 88/220 (40%), Positives = 126/220 (57%), Gaps = 6/220 (2%)
Query: 451 YKERYYADKFE--ISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPF 508
+K++YY KF + N EE+ K+ ++ YV+GL WV YYY+ + SW WF+ YHYAP
Sbjct: 509 WKDKYYMSKFGWGLDNHEEMRKLTEN----YVQGLQWVLYYYYRGIASWPWFFKYHYAPM 564
Query: 509 ASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPD 568
SD+ + ++ F LG+PF+P++QLMG LP S +P +R+LMT P SPI FYP D
Sbjct: 565 ISDVIKGLNADMNFKLGQPFKPYEQLMGVLPDRSKQIVPAAFRDLMTSPESPIIDFYPRD 624
Query: 569 FQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVHPQHPL 628
F++DMNGK+ W+ VVK+PFIDE+ LL E LT EE RN + L + +
Sbjct: 625 FELDMNGKKMEWEAVVKIPFIDERRLLEALATREHLLTPEEKARNGFGVSLKFTYSPEVN 684
Query: 629 YQQITLYCQLYHQLPPQDRFAWEIDVNASGGMNGYIWLCE 668
+ + ++ LP D+ G+ YI L E
Sbjct: 685 FTYPSSLPGVFPDLPSCHCIENIFDLPTMDGLEPYIGLVE 724
>gi|303277183|ref|XP_003057885.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226460542|gb|EEH57836.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 398
Score = 309 bits (791), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 156/226 (69%), Positives = 182/226 (80%)
Query: 31 EGVARPVDVSKPNPNGMEFDNLYLDMNGIIHPCFHPDGKPAPTSYDDVFKSIFDYIDHIF 90
+G PVD S PNPNG EFDNLYLDMNGIIHPCFHP+ +PAPT+ ++VF+ IFDYID +F
Sbjct: 2 DGNTCPVDCSAPNPNGQEFDNLYLDMNGIIHPCFHPEDRPAPTTEEEVFECIFDYIDRLF 61
Query: 91 LLVRPRKLLYLAIDGVAPRAKMNQQRTRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAK 150
++RPRKLLY+AIDGVAPRAKMNQQR+RRFRAA++A E E EEE+LR+ G + K
Sbjct: 62 AMIRPRKLLYMAIDGVAPRAKMNQQRSRRFRAAQEAQEKEEEEEKLRETLRAEGVKVPDK 121
Query: 151 EKPETCDSNVITPGTQFMAVLSAALQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIM 210
K E DSNVITPGT FM LSAALQY++ RLN PGW+ KVI+SDA+VPGEGEHK M
Sbjct: 122 VKSEAFDSNVITPGTPFMGRLSAALQYYVHQRLNTDPGWRGVKVIMSDASVPGEGEHKAM 181
Query: 211 SYIRLQRNLPGFDPNTRHCLYGLDADLIMLSLATHEIHFSILREVI 256
YIR QR L GFDPNTRH +YGLDADLIML+LATHE +F ILREV+
Sbjct: 182 HYIRQQRGLNGFDPNTRHVVYGLDADLIMLALATHEPNFHILREVV 227
>gi|403163584|ref|XP_003323653.2| hypothetical protein PGTG_05555 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375164365|gb|EFP79234.2| hypothetical protein PGTG_05555 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 1452
Score = 309 bits (791), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 168/414 (40%), Positives = 240/414 (57%), Gaps = 71/414 (17%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEED--PQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNG 58
MGV F+RW+++RYP ++ +VEE+ PQ FDNLYLDMNG
Sbjct: 1 MGVSKFFRWMSERYPF-VLQLVEENRIPQ---------------------FDNLYLDMNG 38
Query: 59 IIHPCFHPDGKPAP--TSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQR 116
IIH C HP+ A + +D++ +IF Y++H+F L +P+K+ +LA+DGVAPRAKMNQQR
Sbjct: 39 IIHHCSHPNEGSAHFRITEEDIYLAIFSYLEHLFALAKPQKVFFLAVDGVAPRAKMNQQR 98
Query: 117 TRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETC--DSNVITPGTQFMAVLSAA 174
+RRF+ AK+ +E + K KL P++ DSN ITPGT FMA LS
Sbjct: 99 SRRFKTAKE------NQELIEKAIRRGEKL------PDSTGFDSNCITPGTPFMARLSEQ 146
Query: 175 LQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLD 234
L+YFI ++++ WQ +VI S +VPGEGEHKIM YIRL + ++PN RHC+YGLD
Sbjct: 147 LKYFINKKVSEDSAWQSVQVIFSGHDVPGEGEHKIMEYIRLSKAQEDYNPNIRHCVYGLD 206
Query: 235 ADLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDD 294
ADLIML L +H+ HF +LRE + Q+ G+++
Sbjct: 207 ADLIMLGLLSHDPHFCLLREEVKFSAQKSSS------------------------KGLEN 242
Query: 295 TPIHKKKYQFLNIWVLREYLQYELDIPNP--PFPINFERIVDDFVFLCFFVGNDFLPHMP 352
+++ L+I ++R+YL +E + ERI+DDF+ LC FVGNDFLPH+P
Sbjct: 243 -----QRFYLLHISLVRDYLDWEFASLRKVKDLEYDLERIIDDFILLCIFVGNDFLPHLP 297
Query: 353 TLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQ 406
L I EGA+ LL +Y+R GGYL + G + +R++ + + VYE + F+
Sbjct: 298 NLHINEGALGLLFDIYKRVLPKAGGYLNEFGTLHTERLQLVLNELIVYERENFE 351
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 86/214 (40%), Positives = 128/214 (59%), Gaps = 20/214 (9%)
Query: 402 DQIFQKRTRIQQAYEYNEAMKLNARRESSEELLQAPVAVADTVKLGEPGYKERYYADKFE 461
D++F K T+ + E+NE + +E ++ +A L E +K +YY +K
Sbjct: 492 DEVFHKYTQAAKEPEWNED---DFDQEQEQKFQKA---------LSE--WKSQYYHEKMN 537
Query: 462 I--SNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDLE 519
+ +NP+++ ++ Y EGL WV YYY V SW WFYPYHY+P SDL +++ +
Sbjct: 538 LDFANPDQL----HELTYAYTEGLQWVLHYYYDGVASWSWFYPYHYSPMISDLSNVAPYK 593
Query: 520 ITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFA 579
+F LG+PF+PF+QLMG LP SSS +P +R+LM + SPI YP F+ D+NGK+
Sbjct: 594 FSFNLGKPFKPFEQLMGVLPELSSSHVPPAFRDLMVNSESPIIDLYPRQFETDLNGKKHD 653
Query: 580 WQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRN 613
W+ +VK+PFID+ LL+ K E L +EE RN
Sbjct: 654 WEAIVKIPFIDQDRLLKAMKAHEHKLLDEERRRN 687
>gi|190345269|gb|EDK37129.2| hypothetical protein PGUG_01227 [Meyerozyma guilliermondii ATCC
6260]
Length = 909
Score = 308 bits (789), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 155/346 (44%), Positives = 228/346 (65%), Gaps = 14/346 (4%)
Query: 78 VFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRFRAAKDAAEAEAEEERLR 137
+F +F Y D + ++ RPRK+L +A+DGVAPRAKMNQQR+RRFR+A++A A+ E++R
Sbjct: 1 MFLDVFKYTDRVLMMARPRKVLMIAVDGVAPRAKMNQQRSRRFRSAQEAKIADEEKQRQI 60
Query: 138 KEFEEAGKLL-SAKEKPETCDSNVITPGTQFMAVLSAALQYFIQARLNQIPGWQFTKVIL 196
KE E G+ + A + + DSN ITPGT FM L+ AL+Y++ +L PGW +VI+
Sbjct: 61 KERELRGESIDEAIKGKRSWDSNAITPGTPFMDKLATALRYWVAYKLTSDPGWANVQVII 120
Query: 197 SDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIMLSLATHEIHFSILREVI 256
SDA VPGEGEHKIM++IR QR+ P +DPNT+HC+YGLDADLI L LATHE HF +LRE +
Sbjct: 121 SDATVPGEGEHKIMNFIRSQRSDPEYDPNTKHCIYGLDADLIFLGLATHEPHFRVLREDV 180
Query: 257 TLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIHKKKYQFLNIWVLREYLQY 316
Q + V Q+ + D D +K + +L+I VLREYL+
Sbjct: 181 -FANQSRQLRVSDQISMTQEQ---------KDSLAAQDA---RKPFLWLHINVLREYLET 227
Query: 317 ELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHVYRREFTAMG 376
EL +P+ PF + ER +DD++F+CFFVGNDFLPH+P+L++R+ I++L+ ++R +
Sbjct: 228 ELFVPHLPFTFDVERAIDDWIFMCFFVGNDFLPHLPSLDVRDNGIDILLGCWKRVVPKLK 287
Query: 377 GYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYEYNEAMK 422
GY+T G + ++ VEK + ++ E +IF+KR ++ E N+ +
Sbjct: 288 GYITCDGNLNVESVEKLMNALTYKEAEIFRKRHEQEKRREENDKRR 333
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 99/213 (46%), Positives = 140/213 (65%), Gaps = 4/213 (1%)
Query: 425 ARRESSEELLQAPVAVADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLC 484
+R+ E L P D V++ EPGY +RYY KF ++ EEID+ ++ +V Y+EG+
Sbjct: 441 SRKRPLESELPTPDENGDAVRMWEPGYHDRYYQTKFHLTTQEEIDETRRGLVRSYLEGIS 500
Query: 485 WVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDL----EITFFLGEPFRPFDQLMGTLPA 540
W YYYQ SWQW+YPYHYAPFA+D ++SD+ I F LG PFRP++QLM LPA
Sbjct: 501 WALLYYYQGCPSWQWYYPYHYAPFAADFVNVSDIIGEEGIKFDLGTPFRPYEQLMAVLPA 560
Query: 541 ASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKK 600
AS LPE +R+LM++P SPI FYP +F+IDMNGK+ +WQG+ LPFI+EK LL +
Sbjct: 561 ASGHNLPEVFRDLMSNPDSPIIDFYPEEFEIDMNGKKMSWQGIALLPFIEEKRLLSVLES 620
Query: 601 LEVFLTEEELFRNSVMLDLLYVHPQHPLYQQIT 633
LT++E RN++ ++L + Q+ Y + +
Sbjct: 621 KYPELTDDERDRNTLKSEVLVMSAQNVNYNRFS 653
>gi|156097196|ref|XP_001614631.1| exoribonuclease [Plasmodium vivax Sal-1]
gi|148803505|gb|EDL44904.1| exoribonuclease, putative [Plasmodium vivax]
Length = 1353
Score = 308 bits (789), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 188/491 (38%), Positives = 263/491 (53%), Gaps = 80/491 (16%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVE---------------------EDPQVDGEGVA--RPV 37
MGVP FYRWL RYP E D DGEG A R
Sbjct: 1 MGVPTFYRWLVTRYPKIAKATYETRDSDVYARRTKIRDGHRDGHRDGHRDGEGKATYRVP 60
Query: 38 DVS-----------KPNPNGMEFDNLYLDMNGIIHPCFHPDGKPAPTSYDDVFKSIFDYI 86
D+S N NG FDNLYLDMNGIIH C H D S +++F +IF YI
Sbjct: 61 DLSDYVNNTDETHCSDNINGY-FDNLYLDMNGIIHLCSHSDNSKRAKSNEEIFLNIFLYI 119
Query: 87 DHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRFRAAKDAAEAEAEEERLRKEFEEAGKL 146
+ +F ++ P+KLLY+AIDGVAP+AKMNQQR+RRF++ + +LR++F ++
Sbjct: 120 ERLFDIIEPKKLLYMAIDGVAPKAKMNQQRSRRFKSILCSEIERNAYIQLREKFLSENRV 179
Query: 147 LSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQARLNQIPGWQFTKVILSDANVPGEGE 206
+ E+ DSN+ITPGTQFM LS AL+YF++ ++ W+ VI SDANV GEGE
Sbjct: 180 VP--EEFTFWDSNIITPGTQFMYELSVALKYFVEHKITNDEKWKNIVVIFSDANVCGEGE 237
Query: 207 HKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIMLSLATHEIHFSILREVITLPGQ----- 261
HKI ++I+ QR PG+DPNTRH ++G+DADLIMLSLA+HE +F ILRE+I L +
Sbjct: 238 HKIFNFIKSQRAQPGYDPNTRHVIHGMDADLIMLSLASHEPYFYILREIIILDSKGEEKV 297
Query: 262 QEKCFV-----------CGQVGHLAAECHGKPGD--------------NPADWNGVDDTP 296
Q K FV C + K D N +WN +
Sbjct: 298 QNKDFVGMLKSKQDLPLCTTHMRKTKRMYTKYNDPHYANISRSHNCLINSENWNEL---- 353
Query: 297 IHKKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEI 356
Q L++ +LREYL + + N ER +DDF+F+CF GNDFLPH+P++ I
Sbjct: 354 ------QILDLTILREYLSKDFFFDS---TYNLERCIDDFIFICFLCGNDFLPHLPSISI 404
Query: 357 REGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYE 416
G+I+ L+ +Y++ +G YL + G++ L K++ +A E + F + ++ E
Sbjct: 405 AAGSIDQLVLLYQKVLPVLGDYLINEGKINLKPFSKYVSFIAEVERETFISQYDFKKKRE 464
Query: 417 YNEAMKLNARR 427
+ K + +R
Sbjct: 465 KRDQQKDSLKR 475
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 77/186 (41%), Positives = 115/186 (61%), Gaps = 1/186 (0%)
Query: 454 RYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLK 513
+YY KF + + +D K+VV KY+EGL WV YY+Q W W+YPY+YAP +SDL
Sbjct: 702 KYYKSKFHLDETDYVDDFVKEVVYKYIEGLAWVLSYYFQSCPMWHWYYPYYYAPLSSDLI 761
Query: 514 DLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDM 573
+ ++ TF EP P +QL+ LP+ SS LP+ YR LM SPI FYP F+ +
Sbjct: 762 -IDNVNFTFQKDEPILPLEQLLCVLPSNSSHCLPKGYRELMVRHDSPIIDFYPKTFKEEE 820
Query: 574 NGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVHPQHPLYQQIT 633
NGK++ +Q V+ LPF+D++ +++ ++L LTEEE RN ++ +Y++ H L +QIT
Sbjct: 821 NGKKYKYQWVILLPFVDKERIIKHARELNDTLTEEEKKRNRRGMNKIYMNCSHALSKQIT 880
Query: 634 LYCQLY 639
+ Y
Sbjct: 881 KSIKAY 886
>gi|238503103|ref|XP_002382785.1| exonuclease Kem1, putative [Aspergillus flavus NRRL3357]
gi|220691595|gb|EED47943.1| exonuclease Kem1, putative [Aspergillus flavus NRRL3357]
gi|391870653|gb|EIT79830.1| 5'-3' exonuclease XRN1/KEM1/SEP1 involved in DNA strand exchange
and mRNA turnover [Aspergillus oryzae 3.042]
Length = 1409
Score = 308 bits (788), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 171/416 (41%), Positives = 243/416 (58%), Gaps = 72/416 (17%)
Query: 1 MGVPAFYRWLADRYP-LSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGI 59
MGVP F+RWL++RYP +S++ P EFDNLYLDMNGI
Sbjct: 1 MGVPKFFRWLSERYPAISMLIAENRIP---------------------EFDNLYLDMNGI 39
Query: 60 IHPCFHPDGKPAPT---SYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQR 116
IH C H D +PT + D +F +IF+YI+H++ ++P+KL ++AIDGVAPRAKMNQQR
Sbjct: 40 IHNCTHKDSD-SPTFRMTEDKMFIAIFNYIEHLYGKIKPKKLFFMAIDGVAPRAKMNQQR 98
Query: 117 TRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQ 176
RRFR A DA A+ E+ + + E K + DSN ITPGT+FMA L+ L+
Sbjct: 99 ARRFRTALDAEVAK--EKAISQGIE--------MPKEDAFDSNCITPGTEFMAKLTEQLK 148
Query: 177 YFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDAD 236
YFI ++++ WQ +++LS VPGEGEHKIM YIR + PG+DPN RHCLYGLDAD
Sbjct: 149 YFINKKISEDKDWQGVEIVLSGHEVPGEGEHKIMEYIRHAKAQPGYDPNVRHCLYGLDAD 208
Query: 237 LIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTP 296
LIML L +H+ HF +LRE +T Q +K KP +
Sbjct: 209 LIMLGLLSHDPHFCLLREEVTFGRQVQK----------------KPKE------------ 240
Query: 297 IHKKKYQFLNIWVLREYLQYEL------DIPNPPFPINFERIVDDFVFLCFFVGNDFLPH 350
+ + + L++ ++REYL+ E D+ + F + ER++DDF+ + FFVGNDFLP+
Sbjct: 241 LEHQNFYLLHLCMVREYLELEFQELERTDVLS--FSFDMERVIDDFILMAFFVGNDFLPN 298
Query: 351 MPTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQ 406
+P L I EGA+ L VY+ MGGY+ + G + ++R+ + ++ E + F+
Sbjct: 299 LPNLHINEGALAFLFKVYKEILPKMGGYINEQGVINMERLGMLLDGLSDVEFRFFE 354
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 86/175 (49%), Positives = 111/175 (63%), Gaps = 6/175 (3%)
Query: 451 YKERYYADKFE--ISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPF 508
+K +YY KFE + N EE+ K+ ++ YV+GL WV YYY+ + SW WF+ YHYAP
Sbjct: 509 WKSKYYTGKFEWGLDNHEEMRKLTEN----YVQGLQWVLYYYYRGIASWPWFFQYHYAPM 564
Query: 509 ASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPD 568
SD+K + F LG+PFRP+DQLMG LP S +P YR+LMT P SPI FYP D
Sbjct: 565 ISDVKKGLKADTNFQLGQPFRPYDQLMGVLPDRSKKIVPAAYRDLMTSPESPIVDFYPRD 624
Query: 569 FQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVH 623
F++DMNGK+ W+ VVK+PFI+EK LL K E LT EE RN L + +
Sbjct: 625 FELDMNGKKMEWEAVVKIPFIEEKRLLDALKTKEHLLTPEEKARNGFGASLKFTY 679
>gi|169776419|ref|XP_001822676.1| exonuclease Kem1 [Aspergillus oryzae RIB40]
gi|83771411|dbj|BAE61543.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 1409
Score = 308 bits (788), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 171/416 (41%), Positives = 243/416 (58%), Gaps = 72/416 (17%)
Query: 1 MGVPAFYRWLADRYP-LSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGI 59
MGVP F+RWL++RYP +S++ P EFDNLYLDMNGI
Sbjct: 1 MGVPKFFRWLSERYPAISMLIAENRIP---------------------EFDNLYLDMNGI 39
Query: 60 IHPCFHPDGKPAPT---SYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQR 116
IH C H D +PT + D +F +IF+YI+H++ ++P+KL ++AIDGVAPRAKMNQQR
Sbjct: 40 IHNCTHKDSD-SPTFRMTEDKMFIAIFNYIEHLYGKIKPKKLFFMAIDGVAPRAKMNQQR 98
Query: 117 TRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQ 176
RRFR A DA A+ E+ + + E K + DSN ITPGT+FMA L+ L+
Sbjct: 99 ARRFRTALDAEVAK--EKAISQGIE--------MPKEDAFDSNCITPGTEFMAKLTEQLK 148
Query: 177 YFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDAD 236
YFI ++++ WQ +++LS VPGEGEHKIM YIR + PG+DPN RHCLYGLDAD
Sbjct: 149 YFINKKISEDKDWQGVEIVLSGHEVPGEGEHKIMEYIRHAKAQPGYDPNVRHCLYGLDAD 208
Query: 237 LIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTP 296
LIML L +H+ HF +LRE +T Q +K KP +
Sbjct: 209 LIMLGLLSHDPHFCLLREEVTFGRQVQK----------------KPKE------------ 240
Query: 297 IHKKKYQFLNIWVLREYLQYEL------DIPNPPFPINFERIVDDFVFLCFFVGNDFLPH 350
+ + + L++ ++REYL+ E D+ + F + ER++DDF+ + FFVGNDFLP+
Sbjct: 241 LEHQNFYLLHLCMVREYLELEFQELERTDVLS--FSFDMERVIDDFILMAFFVGNDFLPN 298
Query: 351 MPTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQ 406
+P L I EGA+ L VY+ MGGY+ + G + ++R+ + ++ E + F+
Sbjct: 299 LPNLHINEGALAFLFKVYKEILPKMGGYINEQGVINMERLGMLLDGLSDVEFRFFE 354
Score = 175 bits (444), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 86/175 (49%), Positives = 111/175 (63%), Gaps = 6/175 (3%)
Query: 451 YKERYYADKFE--ISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPF 508
+K +YY KFE + N EE+ K+ ++ YV+GL WV YYY+ + SW WF+ YHYAP
Sbjct: 509 WKSKYYTGKFEWGLDNHEEMRKLTEN----YVQGLQWVLYYYYRGIASWPWFFQYHYAPM 564
Query: 509 ASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPD 568
SD+K + F LG+PFRP+DQLMG LP S +P YR+LMT P SPI FYP D
Sbjct: 565 ISDVKKGLKADTNFQLGQPFRPYDQLMGVLPDRSKKIVPAAYRDLMTSPESPIVDFYPRD 624
Query: 569 FQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVH 623
F++DMNGK+ W+ VVK+PFI+EK LL K E LT EE RN L + +
Sbjct: 625 FELDMNGKKMEWEAVVKIPFIEEKRLLDALKTKEHLLTPEEKARNGFGASLKFTY 679
>gi|326480075|gb|EGE04085.1| 5'-3' exoribonuclease [Trichophyton equinum CBS 127.97]
Length = 1424
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 175/433 (40%), Positives = 247/433 (57%), Gaps = 74/433 (17%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP F+RWL++RYP +I ++ E+ EFD LYLDMNGII
Sbjct: 1 MGVPKFFRWLSERYP-AISQLIAEN-------------------RIPEFDCLYLDMNGII 40
Query: 61 HPCFHPDGKPAPT---SYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRT 117
H C H D +PT + D +F +IF+YI+H+F ++P++L ++AIDGVAPRAKMNQQR
Sbjct: 41 HNCTHKDSD-SPTFRMTEDKMFIAIFNYIEHLFGKIKPKRLFFMAIDGVAPRAKMNQQRA 99
Query: 118 RRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQY 177
RRFR A DA E +ER KE E K + DSN ITPGT+FMA L+ L+Y
Sbjct: 100 RRFRTALDA---ELAKERAIKEGVEM-------PKEDAFDSNCITPGTEFMAKLTKQLKY 149
Query: 178 FIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADL 237
FI ++++ WQ +V+LS VPGEGEHKIM YIR + P +DPN RHCLYGLDADL
Sbjct: 150 FINKKVSEDAEWQGVEVVLSGHEVPGEGEHKIMEYIRQAKAQPEYDPNMRHCLYGLDADL 209
Query: 238 IMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPI 297
IML L +H+ HF +LRE +T Q +K +
Sbjct: 210 IMLGLLSHDPHFCLLREEVTFGRQSQK----------------------------KSKEL 241
Query: 298 HKKKYQFLNIWVLREYLQY---ELDIPNP-PFPINFERIVDDFVFLCFFVGNDFLPHMPT 353
+ + L++ ++REYL+ EL + FP + ERI+DDF+ + FFVGNDFLP++P
Sbjct: 242 EHQNFYLLHLCIVREYLELEFQELKLDGALQFPFDMERIIDDFILMAFFVGNDFLPNLPN 301
Query: 354 LEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQ 413
L I EGA+ + VY+ +GGY+ + G + + R+ + +++ E + F+
Sbjct: 302 LHINEGALAWMFKVYKEILPKLGGYVNEHGTINMGRLRTLLAALSDVEFRFFEA------ 355
Query: 414 AYEYNEAMKLNAR 426
EY++A L ++
Sbjct: 356 --EYSDARWLKSK 366
Score = 165 bits (417), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 83/175 (47%), Positives = 110/175 (62%), Gaps = 6/175 (3%)
Query: 451 YKERYYADKFE--ISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPF 508
+K++YY KF + N EE+ K+ ++ YV+GL WV YYY+ V SW WFY YHYAP
Sbjct: 510 WKDKYYKGKFGWGLENAEEMRKLTEN----YVQGLQWVLFYYYRGVASWPWFYRYHYAPM 565
Query: 509 ASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPD 568
SD+ ++ F LG+PF PF QLMG LP S +P + +LMT P SPI FYP D
Sbjct: 566 ISDIHLGLGADVDFKLGQPFFPFQQLMGVLPDRSKKIVPVAFHSLMTSPDSPIIDFYPRD 625
Query: 569 FQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVH 623
F++DMNGK+ W+ VVK+PFIDE+ LL+ E LT EE RNS + L + +
Sbjct: 626 FELDMNGKKMEWEAVVKIPFIDEERLLKAMATKEHLLTPEEKARNSFGVTLKFSY 680
>gi|326468946|gb|EGD92955.1| exonuclease [Trichophyton tonsurans CBS 112818]
Length = 1424
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 175/433 (40%), Positives = 247/433 (57%), Gaps = 74/433 (17%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP F+RWL++RYP +I ++ E+ EFD LYLDMNGII
Sbjct: 1 MGVPKFFRWLSERYP-AISQLIAEN-------------------RIPEFDCLYLDMNGII 40
Query: 61 HPCFHPDGKPAPT---SYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRT 117
H C H D +PT + D +F +IF+YI+H+F ++P++L ++AIDGVAPRAKMNQQR
Sbjct: 41 HNCTHKDSD-SPTFRMTEDKMFIAIFNYIEHLFGKIKPKRLFFMAIDGVAPRAKMNQQRA 99
Query: 118 RRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQY 177
RRFR A DA E +ER KE E K + DSN ITPGT+FMA L+ L+Y
Sbjct: 100 RRFRTALDA---ELAKERAIKEGVEM-------PKEDAFDSNCITPGTEFMAKLTKQLKY 149
Query: 178 FIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADL 237
FI ++++ WQ +V+LS VPGEGEHKIM YIR + P +DPN RHCLYGLDADL
Sbjct: 150 FINKKVSEDAEWQGVEVVLSGHEVPGEGEHKIMEYIRQAKAQPEYDPNMRHCLYGLDADL 209
Query: 238 IMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPI 297
IML L +H+ HF +LRE +T Q +K +
Sbjct: 210 IMLGLLSHDPHFCLLREEVTFGRQSQK----------------------------KSKEL 241
Query: 298 HKKKYQFLNIWVLREYLQY---ELDIPNP-PFPINFERIVDDFVFLCFFVGNDFLPHMPT 353
+ + L++ ++REYL+ EL + FP + ERI+DDF+ + FFVGNDFLP++P
Sbjct: 242 EHQNFYLLHLCIVREYLELEFQELKLDGALQFPFDMERIIDDFILMAFFVGNDFLPNLPN 301
Query: 354 LEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQ 413
L I EGA+ + VY+ +GGY+ + G + + R+ + +++ E + F+
Sbjct: 302 LHINEGALAWMFKVYKEILPKLGGYVNEHGTINMGRLRTLLAALSDVEFRFFEA------ 355
Query: 414 AYEYNEAMKLNAR 426
EY++A L ++
Sbjct: 356 --EYSDARWLKSK 366
Score = 165 bits (417), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 83/175 (47%), Positives = 110/175 (62%), Gaps = 6/175 (3%)
Query: 451 YKERYYADKFE--ISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPF 508
+K++YY KF + N EE+ K+ ++ YV+GL WV YYY+ V SW WFY YHYAP
Sbjct: 510 WKDKYYKGKFGWGLENAEEMRKLTEN----YVQGLQWVLFYYYRGVASWPWFYRYHYAPM 565
Query: 509 ASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPD 568
SD+ ++ F LG+PF PF QLMG LP S +P + +LMT P SPI FYP D
Sbjct: 566 ISDIHLGLGADVDFKLGQPFFPFQQLMGVLPDRSKKIVPVAFHSLMTSPDSPIIDFYPRD 625
Query: 569 FQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVH 623
F++DMNGK+ W+ VVK+PFIDE+ LL+ E LT EE RNS + L + +
Sbjct: 626 FELDMNGKKMEWEAVVKIPFIDEERLLKAMATKEHLLTPEEKARNSFGVTLKFSY 680
>gi|302506324|ref|XP_003015119.1| hypothetical protein ARB_06879 [Arthroderma benhamiae CBS 112371]
gi|291178690|gb|EFE34479.1| hypothetical protein ARB_06879 [Arthroderma benhamiae CBS 112371]
Length = 1302
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 174/433 (40%), Positives = 248/433 (57%), Gaps = 74/433 (17%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP F+RWL++RYP +I ++ E+ EFD LYLDMNGII
Sbjct: 1 MGVPKFFRWLSERYP-AISQLIAEN-------------------RIPEFDCLYLDMNGII 40
Query: 61 HPCFHPDGKPAPT---SYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRT 117
H C H D +PT + D +F +IF+YI+H+F ++P++L ++AIDGVAPRAKMNQQR
Sbjct: 41 HNCTHKDSD-SPTFRMTEDKMFIAIFNYIEHLFGKIKPKRLFFMAIDGVAPRAKMNQQRA 99
Query: 118 RRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQY 177
RRFR A DA E +E+ KE E K + DSN ITPGT+FMA L+ L+Y
Sbjct: 100 RRFRTALDA---ELAKEKAIKEGVEM-------PKEDAFDSNCITPGTEFMAKLTKQLKY 149
Query: 178 FIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADL 237
FI ++++ WQ +V+LS VPGEGEHKIM YIR + P +DPN RHCLYGLDADL
Sbjct: 150 FINKKVSEDAEWQGVEVVLSGHEVPGEGEHKIMEYIRQAKAQPEYDPNMRHCLYGLDADL 209
Query: 238 IMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPI 297
IML L +H+ HF +LRE +T Q +K +
Sbjct: 210 IMLGLLSHDPHFCLLREEVTFGRQSQK----------------------------KSKEL 241
Query: 298 HKKKYQFLNIWVLREYLQY---ELDIPNP-PFPINFERIVDDFVFLCFFVGNDFLPHMPT 353
+ + L++ ++REYL+ EL + FP + ERI+DDF+ + FFVGNDFLP++P
Sbjct: 242 EHQNFYLLHLCIVREYLELEFQELKLDGALQFPFDMERIIDDFILMAFFVGNDFLPNLPN 301
Query: 354 LEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQ 413
L I EGA+ + VY+ +GGY+ + G + ++R+ + +++ E + F+
Sbjct: 302 LHINEGALAWMFKVYKDVLPKLGGYVNEHGTINMERLRTLLTALSDVEFRFFEA------ 355
Query: 414 AYEYNEAMKLNAR 426
EY++A L ++
Sbjct: 356 --EYSDARWLKSK 366
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 81/175 (46%), Positives = 109/175 (62%), Gaps = 6/175 (3%)
Query: 451 YKERYYADKFE--ISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPF 508
+K++YY KF + N EE+ K+ ++ YV+GL WV YYY+ V SW WFY YHYAP
Sbjct: 510 WKDKYYKGKFGWGLENTEEMRKLTEN----YVQGLQWVLFYYYRGVASWPWFYRYHYAPM 565
Query: 509 ASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPD 568
SD+ ++ F LG+PF PF QLMG LP S +P + LMT P SPI FYP D
Sbjct: 566 ISDIHLGLGADVDFKLGQPFFPFQQLMGVLPDRSKKIVPVAFHGLMTSPDSPIIDFYPRD 625
Query: 569 FQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVH 623
F++DMNGK+ W+ VVK+PFI+E+ LL+ E LT EE RN+ + L + +
Sbjct: 626 FELDMNGKKMEWEAVVKIPFIEEERLLKAMATKEHLLTPEEKARNTFGVTLKFTY 680
>gi|315049287|ref|XP_003174018.1| hypothetical protein MGYG_04190 [Arthroderma gypseum CBS 118893]
gi|311341985|gb|EFR01188.1| hypothetical protein MGYG_04190 [Arthroderma gypseum CBS 118893]
Length = 1424
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 174/433 (40%), Positives = 249/433 (57%), Gaps = 74/433 (17%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP F+RWL++RYP +I ++ E+ EFD LYLDMNGII
Sbjct: 1 MGVPKFFRWLSERYP-AISQLIAEN-------------------RIPEFDCLYLDMNGII 40
Query: 61 HPCFHPDGKPAPT---SYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRT 117
H C H D +PT + D +F +IF+YI+H+F ++P++L ++AIDGVAPRAKMNQQR
Sbjct: 41 HNCTHKDSD-SPTFRMTEDKMFIAIFNYIEHLFGKIKPKRLFFMAIDGVAPRAKMNQQRA 99
Query: 118 RRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQY 177
RRFR A DA E +ER KE E K + DSN ITPGT+FMA L+ L+Y
Sbjct: 100 RRFRTALDA---ELAKERAIKEGIEM-------PKEDAFDSNCITPGTEFMAKLTKQLKY 149
Query: 178 FIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADL 237
F+ ++++ WQ +V+LS VPGEGEHKIM YIR + P +DPN RHCLYGLDADL
Sbjct: 150 FVNKKVSEDAEWQGVEVVLSGHEVPGEGEHKIMEYIRQAKAQPEYDPNMRHCLYGLDADL 209
Query: 238 IMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPI 297
IML L +H+ HF +LRE +T Q +K +
Sbjct: 210 IMLGLLSHDPHFCLLREEVTFGRQSQK----------------------------KSKEL 241
Query: 298 HKKKYQFLNIWVLREYLQY---ELDIPNP-PFPINFERIVDDFVFLCFFVGNDFLPHMPT 353
+ + L++ ++REYL+ EL + FP + ERI+DDF+ + FFVGNDFLP++P
Sbjct: 242 EHQNFYLLHLCIVREYLELEFQELKLDGALQFPFDMERIIDDFILMAFFVGNDFLPNLPN 301
Query: 354 LEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQ 413
L I EGA+ + VY+ +GGY+ + G++ ++R+ + +++ E + F+
Sbjct: 302 LHINEGALAWMFKVYKEILPKLGGYVNEHGKINMERLRTLLAALSDVEFRFFEA------ 355
Query: 414 AYEYNEAMKLNAR 426
EY++A L ++
Sbjct: 356 --EYSDARWLKSK 366
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 81/175 (46%), Positives = 110/175 (62%), Gaps = 6/175 (3%)
Query: 451 YKERYYADKFE--ISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPF 508
+K++YY KF + N EE+ K+ ++ YV+GL WV YYY+ V SW WFY YHYAP
Sbjct: 509 WKDKYYKGKFGWGLENAEEMRKLTEN----YVQGLQWVLFYYYRGVASWPWFYRYHYAPM 564
Query: 509 ASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPD 568
SD+ ++ F LG+PF PF QLMG LP S +P + +LMT P SPI FYP D
Sbjct: 565 ISDIHLGLGADVDFKLGQPFFPFQQLMGVLPDRSKKIVPVAFHSLMTTPESPIIDFYPRD 624
Query: 569 FQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVH 623
F++DMNGK+ W+ VVK+PFI+E+ LL+ E LT +E RNS + L + +
Sbjct: 625 FELDMNGKKMEWEAVVKIPFIEEERLLKAMATKEHLLTPDEKARNSFGVTLKFTY 679
>gi|70985050|ref|XP_748031.1| exonuclease Kem1 [Aspergillus fumigatus Af293]
gi|66845659|gb|EAL85993.1| exonuclease Kem1, putative [Aspergillus fumigatus Af293]
gi|159126045|gb|EDP51161.1| exonuclease Kem1, putative [Aspergillus fumigatus A1163]
Length = 1418
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 190/484 (39%), Positives = 269/484 (55%), Gaps = 85/484 (17%)
Query: 1 MGVPAFYRWLADRYP-LSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGI 59
MGVP F+RWL++RYP +S++ P EFD LYLDMNGI
Sbjct: 1 MGVPKFFRWLSERYPTISMLIAENRIP---------------------EFDALYLDMNGI 39
Query: 60 IHPCFHPDGKPAPT---SYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQR 116
IH C H D +PT + D +F +IF+YI+H++ ++PRKL ++A+DGVAPRAKMNQQR
Sbjct: 40 IHNCTHKDSD-SPTFRMTEDKMFIAIFNYIEHLYGKIKPRKLFFMAVDGVAPRAKMNQQR 98
Query: 117 TRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQ 176
RRFR A DA A KE A + KE P DSN ITPGT+FMA L+ L+
Sbjct: 99 ARRFRTALDAEVA--------KEKAIAQGIEMPKEDP--FDSNCITPGTEFMAKLTQQLK 148
Query: 177 YFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDAD 236
YFI ++++ WQ ++LS VPGEGEHKIM YIR + PG+DPN RHCLYGLDAD
Sbjct: 149 YFINKKISEDKDWQGVDIVLSGHEVPGEGEHKIMEYIRHAKAQPGYDPNIRHCLYGLDAD 208
Query: 237 LIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTP 296
LIML L +H+ HF +LRE +T Q +K KP +
Sbjct: 209 LIMLGLLSHDPHFCLLREEVTFGRQVQK----------------KPKE------------ 240
Query: 297 IHKKKYQFLNIWVLREYLQYELDIPNPP----FPINFERIVDDFVFLCFFVGNDFLPHMP 352
+ + + L++ ++REYL+ E FP + ER++DDF+ + FFVGNDFLP++P
Sbjct: 241 LEHQNFYLLHLCMVREYLELEFQELEQEGVLDFPFDMERVIDDFILMAFFVGNDFLPNLP 300
Query: 353 TLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQ 412
L I EGA++L+ +Y+ MGGY+ + G + L R+ I++++ E + F+
Sbjct: 301 NLHINEGALSLMFKIYKDVLPKMGGYVNEGGVINLKRLGMLIEALSDVEFRFFEA----- 355
Query: 413 QAYEYNEAMKLNARRE---SSEELLQAPVAVADTVKLGEPGYKERYYA-DKFEISNPEEI 468
EY++A +NA+R + E + P + T P KE + K+ ++ PE+
Sbjct: 356 ---EYSDARWINAKRNGVANGSEFQEKPKGLTLT-----PAQKELFKEIKKYVLNRPEKA 407
Query: 469 DKVK 472
K
Sbjct: 408 SGSK 411
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 86/220 (39%), Positives = 126/220 (57%), Gaps = 6/220 (2%)
Query: 451 YKERYYADKFE--ISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPF 508
+K++YY KF + N EE+ K+ ++ YV+GL WV YYY+ + SW WF+ YHYAP
Sbjct: 509 WKDKYYMSKFGWGLDNHEELRKLTEN----YVQGLQWVLYYYYRGIASWPWFFKYHYAPM 564
Query: 509 ASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPD 568
SD+ + ++ F LG+PF+P++QLMG LP S +P +R+LMT P SPI FYP +
Sbjct: 565 ISDVIKGLNADMNFKLGQPFKPYEQLMGVLPDRSKQIVPAAFRDLMTSPESPIIDFYPRE 624
Query: 569 FQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVHPQHPL 628
F++DMNGK+ W+ VVK+PFIDE+ LL E LT EE RN + L + +
Sbjct: 625 FELDMNGKKMEWEAVVKIPFIDERRLLEALATREHLLTPEEKARNGFGVSLKFTYSPEVN 684
Query: 629 YQQITLYCQLYHQLPPQDRFAWEIDVNASGGMNGYIWLCE 668
+ + ++ +P D+ G+ YI L E
Sbjct: 685 FTYPSSLPGVFPDIPSCHCIENIFDLPTMDGLEPYIGLVE 724
>gi|302656474|ref|XP_003019990.1| hypothetical protein TRV_05959 [Trichophyton verrucosum HKI 0517]
gi|291183768|gb|EFE39366.1| hypothetical protein TRV_05959 [Trichophyton verrucosum HKI 0517]
Length = 1303
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 174/433 (40%), Positives = 248/433 (57%), Gaps = 74/433 (17%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP F+RWL++RYP +I ++ E+ EFD LYLDMNGII
Sbjct: 1 MGVPKFFRWLSERYP-AISQLIAEN-------------------RIPEFDCLYLDMNGII 40
Query: 61 HPCFHPDGKPAPT---SYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRT 117
H C H D +PT + D +F +IF+YI+H+F ++P++L ++AIDGVAPRAKMNQQR
Sbjct: 41 HNCTHKDSD-SPTFRMTEDKMFIAIFNYIEHLFGKIKPKRLFFMAIDGVAPRAKMNQQRA 99
Query: 118 RRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQY 177
RRFR A DA E +E+ KE E K + DSN ITPGT+FMA L+ L+Y
Sbjct: 100 RRFRTALDA---ELAKEKAIKEGVEM-------PKEDAFDSNCITPGTEFMAKLTKQLKY 149
Query: 178 FIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADL 237
FI ++++ WQ +V+LS VPGEGEHKIM YIR + P +DPN RHCLYGLDADL
Sbjct: 150 FINKKVSEDAEWQGVEVVLSGHEVPGEGEHKIMEYIRQAKAQPEYDPNMRHCLYGLDADL 209
Query: 238 IMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPI 297
IML L +H+ HF +LRE +T Q +K +
Sbjct: 210 IMLGLLSHDPHFCLLREEVTFGRQSQK----------------------------KSKEL 241
Query: 298 HKKKYQFLNIWVLREYLQY---ELDIPNP-PFPINFERIVDDFVFLCFFVGNDFLPHMPT 353
+ + L++ ++REYL+ EL + FP + ERI+DDF+ + FFVGNDFLP++P
Sbjct: 242 EHQNFYLLHLCIVREYLELEFQELKLDGALQFPFDMERIIDDFILMAFFVGNDFLPNLPN 301
Query: 354 LEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQ 413
L I EGA+ + VY+ +GGY+ + G + ++R+ + +++ E + F+
Sbjct: 302 LHINEGALAWMFKVYKDVLPKLGGYVNEHGTINMERLRTLLAALSDVEFRFFEA------ 355
Query: 414 AYEYNEAMKLNAR 426
EY++A L ++
Sbjct: 356 --EYSDARWLKSK 366
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 80/175 (45%), Positives = 110/175 (62%), Gaps = 6/175 (3%)
Query: 451 YKERYYADKFE--ISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPF 508
+K++YY KF + N EE+ K+ ++ YV+GL WV YYY+ V SW WFY YHYAP
Sbjct: 510 WKDKYYKGKFGWGLENTEEMRKLTEN----YVQGLQWVLFYYYRGVASWPWFYRYHYAPM 565
Query: 509 ASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPD 568
SD+ ++ F LG+PF PF QLMG LP S +P + +LMT P SPI FYP D
Sbjct: 566 ISDIHLGLGADVDFKLGQPFFPFQQLMGVLPDRSKKIVPVAFHSLMTSPDSPIIDFYPRD 625
Query: 569 FQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVH 623
F++DMNGK+ W+ VVK+PFI+E+ LL+ E LT +E RN+ + L + +
Sbjct: 626 FELDMNGKKMEWEAVVKIPFIEEERLLKAMATKEHLLTPDEKARNTFGVTLKFTY 680
>gi|146419185|ref|XP_001485556.1| hypothetical protein PGUG_01227 [Meyerozyma guilliermondii ATCC
6260]
Length = 909
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 158/353 (44%), Positives = 229/353 (64%), Gaps = 28/353 (7%)
Query: 78 VFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRFRAAKDAAEAEAEEERLR 137
+F +F Y D + ++ RPRK+L +A+DGVAPRAKMNQQR+RRFR+A++A A+ E++R
Sbjct: 1 MFLDVFKYTDRVLMMARPRKVLMIAVDGVAPRAKMNQQRSRRFRSAQEAKIADEEKQRQI 60
Query: 138 KEFEEAGKLL-SAKEKPETCDSNVITPGTQFMAVLSAALQYFIQARLNQIPGWQFTKVIL 196
KE E G+ + A + + DSN ITPGT FM L+ AL+Y++ +L PGW +VI+
Sbjct: 61 KERELRGESIDEAIKGKRSWDSNAITPGTPFMDKLATALRYWVAYKLTSDPGWANVQVII 120
Query: 197 SDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIMLSLATHEIHFSILREVI 256
SDA VPGEGEHKIM++IRLQR P +DPNT+HC+YGLDADLI L LATHE HF +LRE +
Sbjct: 121 SDATVPGEGEHKIMNFIRLQRLDPEYDPNTKHCIYGLDADLIFLGLATHEPHFRVLREDV 180
Query: 257 TLPGQQEKCFVCGQV-------GHLAAECHGKPGDNPADWNGVDDTPIHKKKYQFLNIWV 309
Q + V Q+ LAA+ KP + +L+I V
Sbjct: 181 -FANQSRQLRVLDQILMTQEQKDSLAAQDARKP-------------------FLWLHINV 220
Query: 310 LREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHVYR 369
LREYL+ EL +P+ PF + ER +DD++F+CFFVGNDFLPH+P+L++R+ I++L+ ++
Sbjct: 221 LREYLETELFVPHLPFTFDVERAIDDWIFMCFFVGNDFLPHLPSLDVRDNGIDILLGCWK 280
Query: 370 REFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYEYNEAMK 422
R + GY+T G + ++ VEK + ++ E +IF+KR ++ E N+ +
Sbjct: 281 RVVPKLKGYITCDGNLNVESVEKLMNALTYKEAEIFRKRHEQEKRREENDKRR 333
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 100/220 (45%), Positives = 144/220 (65%), Gaps = 4/220 (1%)
Query: 418 NEAMKLNARRESSEELLQAPVAVADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVL 477
+E ++ +R+ E L P D V++ EPGY +RYY KF ++ EEID+ ++ +V
Sbjct: 434 SETLEQPSRKRPLESELPTPDENGDAVRMWEPGYHDRYYQTKFHLTTQEEIDETRRGLVR 493
Query: 478 KYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDL----EITFFLGEPFRPFDQ 533
Y+EG+ W YYYQ SWQW+YPYHYAPFA+D ++SD+ I F LG PFRP++Q
Sbjct: 494 SYLEGISWALLYYYQGCPSWQWYYPYHYAPFAADFVNVSDIIGEEGIKFDLGTPFRPYEQ 553
Query: 534 LMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKL 593
LM LPAAS LPE +R+LM++P SPI FYP +F+IDMNGK+ +WQG+ LPFI+EK
Sbjct: 554 LMAVLPAASGHNLPEVFRDLMSNPDSPIIDFYPEEFEIDMNGKKMSWQGIALLPFIEEKR 613
Query: 594 LLRQTKKLEVFLTEEELFRNSVMLDLLYVHPQHPLYQQIT 633
LL + LT++E RN++ ++L + Q+ Y + +
Sbjct: 614 LLLVLESKYPELTDDERDRNTLKSEVLVMSAQNVNYNRFS 653
>gi|340506425|gb|EGR32559.1| hypothetical protein IMG5_077960 [Ichthyophthirius multifiliis]
Length = 1187
Score = 307 bits (786), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 208/663 (31%), Positives = 331/663 (49%), Gaps = 134/663 (20%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP FY WL+ RYPL + + +DV D YLDMNG+I
Sbjct: 1 MGVPGFYSWLSRRYPLIV------------NQLNSKLDVPY-------IDCFYLDMNGLI 41
Query: 61 HPCFHPDGKPAPTSYDD---------VFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAK 111
+ C K T + D +F IF+YID + LV+P+K+LYL +DG APRAK
Sbjct: 42 YKC----TKEEDTVFKDLLLQKNMQEIFTLIFNYIDEMVNLVQPKKVLYLFLDGPAPRAK 97
Query: 112 MNQQRTRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVL 171
NQQRTRRF +AK + L + G L +T +N I+ GT FM L
Sbjct: 98 QNQQRTRRFLSAKSHKD-------LNNSLKNCGILAEN----QTMQNNAISTGTTFMHEL 146
Query: 172 SAALQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLY 231
+ +Q++I+ + Q P W+ +V S +NVPGEGEHKI++++ + +DP+T HC+Y
Sbjct: 147 NQQIQFYIKNKFKQDPQWKNLEVFFSGSNVPGEGEHKIINFMHQYCSSDNYDPSTTHCIY 206
Query: 232 GLDADLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNG 291
G+DADLIML L+TH + SILRE ++ H+ + +
Sbjct: 207 GVDADLIMLGLSTHIKYVSILRE---------------EMRHI------------PNISK 239
Query: 292 VDDTPIHKKKYQFLNIWVLREYL-----QYELDIPNPPFPINFERIVDDFVFLCFFVGND 346
I ++Q + + ++REYL Q + ++ N + I E I+DDF+ +CFF+GND
Sbjct: 240 AAKREIQINQFQIIYLNIVREYLDLEYKQLQGEMKNLKYDI--ENIIDDFLLICFFIGND 297
Query: 347 FLPHMPTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQ 406
F+P + IREG +L+ +Y+ YL + G + + + I+ ++ YE +
Sbjct: 298 FIPRLYCFNIREGQFEILIQIYKNYIKEAKEYLNNMGYINWKGMYELIKQISNYEKEFIG 357
Query: 407 KRTRIQQAYEYNEAMK------------LNARRESS------------------------ 430
+ + EYN +K +N +ES+
Sbjct: 358 DKAD-ECTKEYNRQLKGQEGEDNFNVDDINKDKESNNNKQNENTFQQEYDNIIIDQQKNV 416
Query: 431 -EELLQAPVAVADTVKLGEP---GYKER--YYADKFEI--SNPEEIDKVKKDVVLKYVEG 482
+E+ + + D L G++ R YY +K ++ SN + KV +++ KY+EG
Sbjct: 417 FKEINKEKKFLEDIQILYNTEADGFQARTYYYKEKLQLDFSNSQHF-KVLDNLITKYIEG 475
Query: 483 LCWVCRYYYQDVCSWQWFYPYHYAPFASDL-------KDLSDLEITFFLGEPFRPFDQLM 535
L +V YYY+ V SW W+YP++YAP ++D+ + + I F L +P++P QLM
Sbjct: 476 LQFVLLYYYKGVPSWSWYYPFYYAPMSADISLYIEYKQSILSQTIKFDLSQPYQPMKQLM 535
Query: 536 GTLPAASSSALPEKYRNLMTDPS-SPIYK---FYPPDFQIDMNGKRFAWQGVVKLPFIDE 591
+ ++S LP K L+TD + SP+ +YP +++ID G FA + +V LPF+++
Sbjct: 536 CIIHPENASLLPPKIAQLLTDQTNSPLRNPIDYYPEEYRIDPYGGVFAHEYIVVLPFMEQ 595
Query: 592 KLL 594
+L+
Sbjct: 596 ELI 598
>gi|21755602|dbj|BAC04718.1| unnamed protein product [Homo sapiens]
Length = 473
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 190/532 (35%), Positives = 275/532 (51%), Gaps = 100/532 (18%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP FYRW+++RYP + +VV+E Q+ EFDNLYLDMNGII
Sbjct: 1 MGVPKFYRWISERYP-CLSEVVKEH-QIP------------------EFDNLYLDMNGII 40
Query: 61 HPCFHP--DGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C HP D TS D +F IF Y++ +F +++PRK+ ++A+DGVAPRAKMNQQR R
Sbjct: 41 HQCSHPNDDDVHFRTSDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RFR+AK+A E++++K E+ G+ L + + DSN ITPGT+FMA L L+YF
Sbjct: 101 RFRSAKEA------EDKIKKAIEK-GETLPTEAR---FDSNCITPGTEFMARLHEHLKYF 150
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
+ +++ WQ + S PGEGEHKIM +IR ++ P DPNTRHCLYGLDADLI
Sbjct: 151 VNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLI 210
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
ML L +HE HFS+LRE + G++ + VC ++T H
Sbjct: 211 MLGLTSHEAHFSLLREEVRFGGKKTQR-VCAP----------------------EETTFH 247
Query: 299 KKKYQFLNIWVLREYLQYELDI--PNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEI 356
L++ ++REY+ YE + F + ERI+DD++ + F VGNDF+PH+P L I
Sbjct: 248 -----LLHLSLMREYIDYEFSVLKEKITFKYDIERIIDDWILMGFLVGNDFIPHLPHLHI 302
Query: 357 REGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQK--------R 408
A+ LL Y +GGY+ ++G + L R EK++ ++ ++ + F +
Sbjct: 303 NHDALPLLYGTYVTILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSEVFVDLKWFE 362
Query: 409 TRIQQAY-------------EYNEAMKLNARRES---------------SEELLQAPVAV 440
+++ Y Y E KL + S S++ L+
Sbjct: 363 SKVGNKYLNEAAGVAAEEARNYKEKKKLKGQENSLCWTALDKNEGEMITSKDNLEDETED 422
Query: 441 ADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQ 492
D + YK YY K + D D YV+ + W+ YYY
Sbjct: 423 DDLFETEFRQYKRTYYMTKMGVDVVS--DDFLADQAACYVQAIQWILHYYYH 472
>gi|327301545|ref|XP_003235465.1| exonuclease [Trichophyton rubrum CBS 118892]
gi|326462817|gb|EGD88270.1| exonuclease [Trichophyton rubrum CBS 118892]
Length = 1424
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 174/433 (40%), Positives = 248/433 (57%), Gaps = 74/433 (17%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP F+RWL++RYP +I ++ E+ EFD LYLDMNGII
Sbjct: 1 MGVPKFFRWLSERYP-AISQLIAEN-------------------RIPEFDCLYLDMNGII 40
Query: 61 HPCFHPDGKPAPT---SYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRT 117
H C H D +PT + D +F +IF+YI+H+F ++P++L ++AIDGVAPRAKMNQQR
Sbjct: 41 HNCTHKDSD-SPTFRMTEDKMFIAIFNYIEHLFGKIKPKRLFFMAIDGVAPRAKMNQQRA 99
Query: 118 RRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQY 177
RRFR A DA E +E+ KE E K + DSN ITPGT+FMA L+ L+Y
Sbjct: 100 RRFRTALDA---ELAKEKAIKEGVEM-------PKEDAFDSNCITPGTEFMAKLTKQLKY 149
Query: 178 FIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADL 237
FI ++++ WQ +V+LS VPGEGEHKIM YIR + P +DPN RHCLYGLDADL
Sbjct: 150 FINKKVSEDAEWQGVEVVLSGHEVPGEGEHKIMEYIRQAKAQPEYDPNMRHCLYGLDADL 209
Query: 238 IMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPI 297
IML L +H+ HF +LRE +T Q +K +
Sbjct: 210 IMLGLLSHDPHFCLLREEVTFGRQSQK----------------------------KSKEL 241
Query: 298 HKKKYQFLNIWVLREYLQY---ELDIPNP-PFPINFERIVDDFVFLCFFVGNDFLPHMPT 353
+ + L++ ++REYL+ EL + FP + ERI+DDF+ + FFVGNDFLP++P
Sbjct: 242 EHQNFYLLHLCIVREYLELEFQELKLDGALQFPFDMERIIDDFILMAFFVGNDFLPNLPN 301
Query: 354 LEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQ 413
L I EGA+ + VY+ +GGY+ + G + ++R+ + +++ E + F+
Sbjct: 302 LHINEGALAWMFKVYKDVLPKLGGYVNEHGTINMERLRTLLAALSDVEFRFFEA------ 355
Query: 414 AYEYNEAMKLNAR 426
EY++A L ++
Sbjct: 356 --EYSDARWLKSK 366
Score = 164 bits (415), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 82/175 (46%), Positives = 109/175 (62%), Gaps = 6/175 (3%)
Query: 451 YKERYYADKFE--ISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPF 508
+K++YY KF + N EE+ K+ ++ YV+GL WV YYY+ V SW WFY YHYAP
Sbjct: 510 WKDKYYKGKFGWGLENTEEMRKLTEN----YVQGLQWVLFYYYRGVASWPWFYRYHYAPM 565
Query: 509 ASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPD 568
SD+ ++ F LG+PF PF QLMG LP S +P + LMT P SPI FYP D
Sbjct: 566 ISDIHLGLGADVDFKLGQPFFPFQQLMGVLPDRSKKIVPVAFHGLMTTPDSPIIDFYPRD 625
Query: 569 FQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVH 623
F++DMNGK+ W+ VVK+PFIDE+ LL+ E LT EE RN+ + L + +
Sbjct: 626 FELDMNGKKMEWEAVVKIPFIDEERLLKAMATKEHLLTPEEKARNTFGVTLKFTY 680
>gi|356533625|ref|XP_003535362.1| PREDICTED: 5'-3' exoribonuclease 3-like [Glycine max]
Length = 351
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 172/289 (59%), Positives = 192/289 (66%), Gaps = 79/289 (27%)
Query: 70 PAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRFRAAKDAAEA 129
PAP +YDDVFKSIFDYIDH++ LVRPRKLLYLAIDGVAPRAKMNQQR+RRFR AKD AEA
Sbjct: 121 PAPATYDDVFKSIFDYIDHLYSLVRPRKLLYLAIDGVAPRAKMNQQRSRRFRTAKDVAEA 180
Query: 130 EAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQARLNQIPGW 189
EAEEERLRK+F GK+LS+K+KPET DSNVIT PG
Sbjct: 181 EAEEERLRKKFMSEGKVLSSKDKPETSDSNVIT------------------------PGT 216
Query: 190 QFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIMLSLATHEIHF 249
QF +DADLIMLSLATHE+HF
Sbjct: 217 QF-----------------------------------------MDADLIMLSLATHEVHF 235
Query: 250 SILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIHKKKYQFLNIWV 309
S+LRE +KCF+CGQVGH AA+C + D P DD+ IHKKKY+FLNIWV
Sbjct: 236 SVLRE--------DKCFLCGQVGHFAADCQAEDFDTP------DDSSIHKKKYEFLNIWV 281
Query: 310 LREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIRE 358
LREYLQ+EL+IPNPPF I+ ERIVDDFVFLCFFVGNDFLPHMPTLEIRE
Sbjct: 282 LREYLQFELEIPNPPFEIDIERIVDDFVFLCFFVGNDFLPHMPTLEIRE 330
>gi|402585499|gb|EJW79439.1| single-stranded RNA 5'-3' exonuclease [Wuchereria bancrofti]
Length = 446
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 169/402 (42%), Positives = 234/402 (58%), Gaps = 59/402 (14%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP FYRW+++RYP + V +D Q+ EFDNLYLDMNGII
Sbjct: 1 MGVPKFYRWISERYP--CLSEVVQDEQIP------------------EFDNLYLDMNGII 40
Query: 61 HPCFHPDGKPAP--TSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C HPD + S + +F+ IF+YID +F +++P+K+ ++AIDGVAPRAKMNQQR R
Sbjct: 41 HGCSHPDDEDISFRISEEQIFRDIFNYIDFLFGIIKPKKVFFMAIDGVAPRAKMNQQRAR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RF +AK+A EA L K ++ K+ EKP DSN ITPGT+FMA L LQYF
Sbjct: 101 RFMSAKNAREA------LSKARKKGIKI--PDEKP--FDSNCITPGTEFMARLHEQLQYF 150
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
+Q ++ WQ ++ LS N PGEGEHKIM +IR +R+ +D NTRHCLYGLDADLI
Sbjct: 151 VQMKITTDSCWQGLRIYLSGHNCPGEGEHKIMDFIRSERSRSDYDANTRHCLYGLDADLI 210
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
ML + +HE HF++LRE + Q+ + NG T +
Sbjct: 211 MLGICSHEPHFALLREEVKFGRQKNR-------------------------NGKHRTSVD 245
Query: 299 KKKYQFLNIWVLREYLQYELD--IPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEI 356
+ + L++ +LREYL +E PF + E ++DD+V + F +GNDF+PH+P + I
Sbjct: 246 EITFHLLHLSLLREYLSWEFYPLKEKLPFDYDLESVIDDWVLMGFLIGNDFIPHLPHVHI 305
Query: 357 REGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVA 398
E A+ LL Y + GY+ +AG + L R E F+++ A
Sbjct: 306 HEDALPLLYATYNEVLPQLDGYINEAGILNLKRFEIFLKNFA 347
>gi|303390661|ref|XP_003073561.1| 5-3 exoribonuclease [Encephalitozoon intestinalis ATCC 50506]
gi|303302708|gb|ADM12201.1| 5-3 exoribonuclease [Encephalitozoon intestinalis ATCC 50506]
Length = 656
Score = 306 bits (784), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 213/672 (31%), Positives = 317/672 (47%), Gaps = 99/672 (14%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP+ +RWL + ++ ++E+ P VD LYLD N II
Sbjct: 1 MGVPSLFRWLQLSHREAVHSIMEK-PSVDC---------------------LYLDFNAII 38
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
H C P D++K++ D+ID+I L RPRKLLY+AIDGVAPRAK++ QR RR+
Sbjct: 39 HTCIKPGLGSEEEIERDLYKTVGDFIDYILLRTRPRKLLYIAIDGVAPRAKLSHQRARRY 98
Query: 121 RAAKDAAEAEA-----------------EEERLRKEFEEAGKL--------------LSA 149
++A E +A EE EF L L+
Sbjct: 99 KSALGKKEGKAPVSTGKTDPTASSISEKTEEATDVEFTGESSLYDKFIAEDLSESSSLAM 158
Query: 150 KEKPETCDSNVITPGTQFMAVLSAALQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKI 209
+ E D N ITPGT FM L L +IQ +L++ P ++I S VPGEGE KI
Sbjct: 159 DVEAEKFDLNCITPGTPFMERLHNVLISYIQYKLSKDPEVSHLRIIYSSYLVPGEGEQKI 218
Query: 210 MSYIRLQRNLPGFDPNTRHCLYGLDADLIMLSLATHEIHFSILREVITLPGQQEK--CFV 267
MS+IR Q +P N H +Y D DLI L L+ ++ I+R+ + ++K C
Sbjct: 219 MSFIRNQ--IPA-AKNDVHMIYSPDGDLIFLGLSLYKSRVLIMRDYFSPSKARKKKICTK 275
Query: 268 CGQVGHLAAECHGKPGDNPADWNGVDDTPIHKKKYQFLNIWVLREYLQYELDIPNPPFPI 327
CG+ GH EC GV D + ++NI LR L E +
Sbjct: 276 CGRTGHSNDEC------------GVFDN----YHFVYVNIAELRSRLIREFR-KHTTQRF 318
Query: 328 NFERIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLL 387
N ER++ D++FLCF +GNDF+P +P L+IR +I+ L + + F+ Y+T +
Sbjct: 319 NEERLLSDWIFLCFLLGNDFVPSIPCLDIRFHSIDTLTEIMMKNFSETKSYITCNTSINY 378
Query: 388 DRVEKFIQSVAVYEDQIFQKRTRIQQAYEYNEAMKLNARRESSEELLQAPVAVADTVKLG 447
+ F +A ED ++ ++++ L+ RE EL P + + + +
Sbjct: 379 QVLRNFYTILARKEDGLYHRKSQ-----------SLDRLRE---ELKDMPNIIYEKIPIH 424
Query: 448 EPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAP 507
K +YY K +I K++ +Y++ L WV YY W W+YP+H+AP
Sbjct: 425 TKTGKIQYYTSKLNAKTDSDI----KNICYEYIKALYWVYSYYILGYTGWDWYYPHHFAP 480
Query: 508 FASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYK-FYP 566
A+DL LS EI G P RP +QL+ LP S +P + + + + YK +YP
Sbjct: 481 LAADLSKLSISEIRINSGLPLRPLEQLLVVLPPMSKGMVPRELQPIFNN-----YKDYYP 535
Query: 567 PDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVHPQH 626
D + DM K + WQ VV LPF+D + +L + L E+L RN LDL + +
Sbjct: 536 EDVETDMFDKVYLWQEVVLLPFMDFRSILSENASRFNSLGYEDLSRNLRSLDLFFTVDKK 595
Query: 627 PLYQQITLYCQL 638
+ +Y +L
Sbjct: 596 STETILNMYSEL 607
>gi|328850703|gb|EGF99864.1| hypothetical protein MELLADRAFT_68240 [Melampsora larici-populina
98AG31]
Length = 406
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 151/288 (52%), Positives = 200/288 (69%), Gaps = 11/288 (3%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDP---QVDGEGVARPVDVSKPNPNGMEFDNLYLDMN 57
MGVPA +RWL+ +YP + V+E+ P +V+G P+D+SK NPNG+EFD MN
Sbjct: 1 MGVPALFRWLSKKYPKIVEQVIEDVPIRTEVEGGYEETPLDMSKRNPNGVEFD-----MN 55
Query: 58 GIIHPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRT 117
GI+HPC HP+GK P + +++ +F Y + + +VRPRKLL +AIDGVAPRAKMNQQR+
Sbjct: 56 GIVHPCTHPEGKKPPETEEEMMIEVFKYTERVVNMVRPRKLLMIAIDGVAPRAKMNQQRS 115
Query: 118 RRFRAAKDAAEAEAEEERLRKEFEEAGKLLSA--KEKPETCDSNVITPGTQFMAVLSAAL 175
RRFRAA++A E + +E++ GK LS K + DSN ITPGT FM +L+ +L
Sbjct: 116 RRFRAAQEAQTKEEAKLAAIEEWKTMGKELSEEFKSDKKAWDSNAITPGTPFMTLLTESL 175
Query: 176 QYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDA 235
+Y+I ++N PGW+ +VILSDA+VPGEGEHKIM +IR QR +DPNT H +YGLDA
Sbjct: 176 RYWIVHKMNTDPGWKQIQVILSDASVPGEGEHKIMDFIRRQRTHSSYDPNTSHVIYGLDA 235
Query: 236 DLIMLSLATHEIHFSILRE-VITLPGQQEKCFVCGQVGHLAAECHGKP 282
DLIMLSLATHE HF +LRE V + C+ CGQ GH +++C GKP
Sbjct: 236 DLIMLSLATHEPHFKVLREDVFADQKKGRGCYTCGQPGHHSSQCQGKP 283
>gi|124506737|ref|XP_001351966.1| exoribonuclease, putative [Plasmodium falciparum 3D7]
gi|23504994|emb|CAD51777.1| exoribonuclease, putative [Plasmodium falciparum 3D7]
Length = 1311
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 176/447 (39%), Positives = 251/447 (56%), Gaps = 48/447 (10%)
Query: 1 MGVPAFYRWLADRYP--------LSIVDVVEEDPQVDGEGVARPV-DVS----------- 40
MGVP FYRWL RYP DV + D G V D++
Sbjct: 1 MGVPTFYRWLVTRYPKIAKAVYETRDSDVYSRRTKYDENGEYFKVHDLNDYVNNTDELHC 60
Query: 41 KPNPNGMEFDNLYLDMNGIIHPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLY 100
N NG FDN+YLDMNGIIH C H D S +++F ++F Y++ +F ++ P+KLLY
Sbjct: 61 SDNINGY-FDNMYLDMNGIIHLCSHSDNSKRAKSNEEIFLNVFLYVERLFDIIEPKKLLY 119
Query: 101 LAIDGVAPRAKMNQQRTRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNV 160
+AIDGVAP+AKMNQQR+RRF++ + + L++ F K++ E+ DSNV
Sbjct: 120 MAIDGVAPKAKMNQQRSRRFKSISCSEIEKRAYLELKERFIAENKMVP--EETTYWDSNV 177
Query: 161 ITPGTQFMAVLSAALQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLP 220
ITPGT+FM LS AL+YFI+ ++ W+ VI SD+NV GEGEHKI ++I+ QR P
Sbjct: 178 ITPGTEFMHELSIALKYFIEHKITNDEKWKNVVVIFSDSNVCGEGEHKIFNFIKSQRAQP 237
Query: 221 GFDPNTRHCLYGLDADLIMLSLATHEIHFSILREVITLP------------------GQQ 262
G+DPNTRH ++G+DADLIMLSLA+HE +F ILRE+I L
Sbjct: 238 GYDPNTRHVIHGMDADLIMLSLASHEPYFYILREIIDLDPKSEEKEKTKKKEYVGMLKSY 297
Query: 263 EKCFVCGQVGHLAAECHGKPGD-NPADWNGVDDTPIHKK---KYQFLNIWVLREYLQYEL 318
+ C + + K D N A+ + ++ + + Q L++ +LREYL +L
Sbjct: 298 DDLHFCTRYAKKEKKLFNKYNDPNYANVTISKNASLNYEYWNELQILDLTILREYLLKDL 357
Query: 319 DIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHVYRREFTAMGGY 378
N ER +DDF+F+CFF GNDFLPH+P++ I G+I+ L+ +Y++ +G Y
Sbjct: 358 FFDT---SFNMERCLDDFIFICFFCGNDFLPHLPSISIAGGSIDQLILLYQKVLPTLGDY 414
Query: 379 LTDAGEVLLDRVEKFIQSVAVYEDQIF 405
L + G + L K+I +A E + F
Sbjct: 415 LINEGSINLKSFTKYISFIAEVERETF 441
Score = 158 bits (400), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 77/186 (41%), Positives = 112/186 (60%), Gaps = 1/186 (0%)
Query: 454 RYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLK 513
+YY KF + + + I+ KDVV KYVEGL WV YY+Q W W+YPY+YAP +SDL
Sbjct: 706 KYYKSKFHLDDNDAIEDFIKDVVYKYVEGLAWVLAYYFQSCPMWHWYYPYYYAPLSSDLI 765
Query: 514 DLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDM 573
+ ++ F EP PF+QL+ LPA SS LP+ Y+ LM SPI FYP F+ +
Sbjct: 766 -VDNITFNFEKDEPLLPFEQLLCVLPANSSHCLPKMYKQLMLHKDSPIIDFYPHTFKEEQ 824
Query: 574 NGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVHPQHPLYQQIT 633
NGK++ +Q ++ LPF+D++ +++ + L L +E RN L+ +YV HPL + IT
Sbjct: 825 NGKKYKYQWIILLPFVDKERIIKHARPLHDTLNNDEKKRNRRGLNKIYVSSNHPLSKTIT 884
Query: 634 LYCQLY 639
+ Y
Sbjct: 885 KSIKNY 890
>gi|169615619|ref|XP_001801225.1| hypothetical protein SNOG_10969 [Phaeosphaeria nodorum SN15]
gi|111060348|gb|EAT81468.1| hypothetical protein SNOG_10969 [Phaeosphaeria nodorum SN15]
Length = 1439
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 172/441 (39%), Positives = 247/441 (56%), Gaps = 72/441 (16%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP F+RW+++RYP I ++ E+ EFD LYLDMNGII
Sbjct: 1 MGVPKFFRWMSERYP-GISQLIAEN-------------------RIPEFDCLYLDMNGII 40
Query: 61 HPCFH--PDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C H DG A S D +F IF+YI+H+F ++P++L ++AIDGVAPRAKMNQQR R
Sbjct: 41 HNCTHNDSDGATARKSEDQMFLDIFNYIEHLFGKIKPKQLFFMAIDGVAPRAKMNQQRAR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RFR A DA +A ++ +R+ E K E DSN ITPGT FMA L+ L+YF
Sbjct: 101 RFRTALDAEKAR--DKAIREGVE--------MPKEEAFDSNCITPGTAFMAKLTQQLKYF 150
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
I ++++ WQ +V+LS VPGEGEHK+M YIR + PG+DPN RHCLYGLDADLI
Sbjct: 151 INKKVSEDMDWQGVEVVLSGHEVPGEGEHKVMEYIRQAKAQPGYDPNRRHCLYGLDADLI 210
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
ML L +H+ HF +LRE +T G+Q + +
Sbjct: 211 MLGLLSHDPHFCLLREEVTF-GRQSQT---------------------------KSKELE 242
Query: 299 KKKYQFLNIWVLREYLQYELDIPNPP----FPINFERIVDDFVFLCFFVGNDFLPHMPTL 354
+ + +++ ++REYL+ E P FP + ER++DDF+ + FFVGNDFLP++P L
Sbjct: 243 HQNFYLMHLCIVREYLELEFQELAEPGALGFPFDMERVIDDFILMAFFVGNDFLPNLPHL 302
Query: 355 EIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQA 414
I EGA+ L+ +VY+ GY+ + G + ++R+ + ++ E + F+
Sbjct: 303 HINEGALALMFNVYKTVLPKGKGYINEEGVINMERLVLLLDELSQIEYRHFES------- 355
Query: 415 YEYNEAMKLNARRESSEELLQ 435
E +A +R E+++Q
Sbjct: 356 -ENADAAWFKGKRLEKEDVMQ 375
Score = 162 bits (410), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 94/219 (42%), Positives = 126/219 (57%), Gaps = 18/219 (8%)
Query: 409 TRIQQAYEYNEAMKLNARRESSEELLQAPVAVADTVKLGEP--GYKERYYADKFEI--SN 464
TR+ Q YE + + ++A E ++ +Q K E +K YY KFE SN
Sbjct: 478 TRVIQKYEAAKIVDISA--EDAQNEMQK--------KYDEKFDAWKNDYYKSKFEWDRSN 527
Query: 465 PEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDLEITFFL 524
EE+ K+ ++ YV+GL WV YYY+ V SW W+Y YHY+P SD+K I F L
Sbjct: 528 EEELRKLTEN----YVQGLQWVLYYYYRGVASWPWYYGYHYSPMISDVKRGIKANIDFKL 583
Query: 525 GEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVV 584
G+PF+PF QLMG LP S S +P+ Y LMT SPI FYP DF +DMNGK+ W+ VV
Sbjct: 584 GQPFKPFQQLMGVLPDRSKSIVPKAYHPLMTSEDSPIIDFYPRDFTLDMNGKKQDWEAVV 643
Query: 585 KLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVH 623
K+PFI+E LL+ E LT +E RNS + L + +
Sbjct: 644 KIPFIEEDRLLKAMATKEDDLTADEKSRNSFGVSLKFTY 682
>gi|345326399|ref|XP_003431040.1| PREDICTED: LOW QUALITY PROTEIN: 5'-3' exoribonuclease 1-like
[Ornithorhynchus anatinus]
Length = 1614
Score = 305 bits (782), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 173/487 (35%), Positives = 253/487 (51%), Gaps = 67/487 (13%)
Query: 164 GTQFMAVLSAALQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFD 223
GT+FMA L L+YF+ +++ WQ + LS PGEGEHKIM +IR ++ D
Sbjct: 37 GTEFMARLHEHLKYFVNMKISTDKSWQGVTIYLSGHETPGEGEHKIMEFIRSEKAKKDHD 96
Query: 224 PNTRHCLYGLDADLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPG 283
PNTRHCLYGLDADLIML L +HE HFS+LRE + G++ + VC
Sbjct: 97 PNTRHCLYGLDADLIMLGLTSHESHFSLLREEVRFSGKKTQ-RVCAP------------- 142
Query: 284 DNPADWNGVDDTPIHKKKYQFLNIWVLREYLQYELDI--PNPPFPINFERIVDDFVFLCF 341
++T H L++ ++REY+ YE + F + ERI+DD++ + F
Sbjct: 143 ---------EETTFH-----LLHLSLMREYIDYEFSVLKSKISFKYDIERIIDDWILMGF 188
Query: 342 FVGNDFLPHMPTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYE 401
VGNDF+PH+P L I A+ LL Y +GGY+ + G + L R EK++ ++ ++
Sbjct: 189 LVGNDFIPHLPHLHINHDALPLLYRTYMTTLPELGGYINENGHLNLPRFEKYLVKLSDFD 248
Query: 402 DQIF----------------------------------QKRTRIQQAYEYNEAM-KLNAR 426
+ F QK+ + Q+ A+ K
Sbjct: 249 REHFNEVFVDLKWFESKVGNKYLNEAAGIAAEEAKNYKQKKLKSQENSICLAALNKTEGE 308
Query: 427 RESSEELLQAPVAVADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWV 486
+S+ +L+ D + YK YY K + D+ D Y++ + W+
Sbjct: 309 ATTSKSVLEDEPEDDDLFETEFRQYKRTYYMTKMGVEVVS--DEFLADQAECYIQAIQWI 366
Query: 487 CRYYYQDVCSWQWFYPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSAL 546
YYY V SW WFYPYHYAP+ SD++++ + +I F LG+PF PF+QL+ LPAAS L
Sbjct: 367 LHYYYHGVQSWSWFYPYHYAPYLSDIRNIKEFKIQFELGKPFMPFEQLLAVLPAASKDLL 426
Query: 547 PEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLT 606
P Y++LMT SPI ++YP DF+ D+NGK+ W+ VV +PFIDE LL+ + L
Sbjct: 427 PVCYQHLMTSEDSPIIEYYPTDFKTDLNGKQQEWEAVVLIPFIDENRLLQAMEPCNKNLK 486
Query: 607 EEELFRN 613
+EE RN
Sbjct: 487 KEEETRN 493
>gi|440793174|gb|ELR14365.1| Exonuclease ii, putative [Acanthamoeba castellanii str. Neff]
Length = 1421
Score = 305 bits (781), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 166/353 (47%), Positives = 220/353 (62%), Gaps = 45/353 (12%)
Query: 56 MNGIIHPCFHP---DGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKM 112
MNGIIH C HP D S ++ IF YID +F V+P+KL+YLAIDGVAPRAKM
Sbjct: 1 MNGIIHNCTHPEWNDNVLNKLSEKEMIIQIFHYIDRLFHAVKPQKLIYLAIDGVAPRAKM 60
Query: 113 NQQRTRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLS 172
NQQR RR R A+++ EA L K E K+ + + DSN ITPGT+FMA LS
Sbjct: 61 NQQRQRRLRTAQESKEA------LEKARETGEKV-----QEDMFDSNCITPGTEFMAKLS 109
Query: 173 AALQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYG 232
L+YFI+ ++ + W+ +VILS VPGEGEHKIM YIR Q+ LP DPNTRHCLYG
Sbjct: 110 DYLKYFIRKKIKEDSAWRKVEVILSGHEVPGEGEHKIMEYIRRQKMLPEHDPNTRHCLYG 169
Query: 233 LDADLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGV 292
LDADLIML+LA+HE HF++LRE +T G+++K KP P
Sbjct: 170 LDADLIMLALASHEPHFALLREEVTF-GRRKK----------------KPEATPP----- 207
Query: 293 DDTPIHKKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMP 352
K+Q L + +LREYL E PF + ER++DDFV CFFVGNDFLP++P
Sbjct: 208 --------KFQLLFVNLLREYLDEEFRT-ELPFGYDLERVIDDFVLFCFFVGNDFLPNLP 258
Query: 353 TLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIF 405
++I +GA++ + +YR +GGY+T+ GE+L +R EKF++ +A YE ++
Sbjct: 259 YMDIADGALDKMFDIYRELLPTLGGYITEKGEILWERCEKFLKQIAKYEQEML 311
Score = 171 bits (432), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 92/215 (42%), Positives = 127/215 (59%), Gaps = 4/215 (1%)
Query: 401 EDQIFQKRTRIQQAYEYNEAMKLNARRESSEELLQAPVAVADTVKLGEPGYKERYYADKF 460
E +F+ + + EY+ A + A E E P + + + +K YY DKF
Sbjct: 389 ETVVFEGGLKAKSDSEYDFAA-MAAASEKFNEQRNRPRDEEEEEEYDDDSWKNWYYRDKF 447
Query: 461 EISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDLEI 520
I E ++ K + Y+EGL WV RYYY+ CSW WF+P+HYAP SDL +L+ ++
Sbjct: 448 RIG--LENEEYHKHLRTSYLEGLVWVLRYYYRGCCSWNWFFPFHYAPLCSDLVNLTSYKL 505
Query: 521 TFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAW 580
F LG PF PF QLMG LPAAS + LP Y+ LMT +SPI FYP +F++DMNGKR AW
Sbjct: 506 KFDLGTPFYPFQQLMGVLPAASKTLLPVPYQELMTRATSPIIDFYPEEFKVDMNGKRNAW 565
Query: 581 QGVVKLPFIDEKLLLRQTKKLEV-FLTEEELFRNS 614
+ + +PFIDEK LL ++ L+E+E R+S
Sbjct: 566 EAIALIPFIDEKRLLDAMDTVDKNRLSEKERKRDS 600
>gi|212535156|ref|XP_002147734.1| exonuclease Kem1, putative [Talaromyces marneffei ATCC 18224]
gi|210070133|gb|EEA24223.1| exonuclease Kem1, putative [Talaromyces marneffei ATCC 18224]
Length = 1419
Score = 305 bits (781), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 175/452 (38%), Positives = 251/452 (55%), Gaps = 76/452 (16%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP F+RWL++RYP SI ++ E+ EFDNLY DMNGII
Sbjct: 1 MGVPKFFRWLSERYP-SISQLIAEN-------------------RIPEFDNLYFDMNGII 40
Query: 61 HPCFHPDGKPAPT---SYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRT 117
H C H D +PT S D +F +IF+YI+H++ ++P+KL ++AIDGVAPRAKMNQQR
Sbjct: 41 HNCTHSDSD-SPTHRMSEDQMFIAIFNYIEHLYGKIKPKKLFFMAIDGVAPRAKMNQQRA 99
Query: 118 RRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQY 177
RRFR+A DA A+ E+ + + E K + DSN ITPGT+FMA L+ L+Y
Sbjct: 100 RRFRSALDAEVAK--EKAIAQGIE--------MPKEDAFDSNCITPGTEFMARLTKQLKY 149
Query: 178 FIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADL 237
FI ++++ WQ +++LS VPGEGEHKIM YIR + PG+DPN RHCLYGLDADL
Sbjct: 150 FISKKISEDVEWQGVEIVLSGHEVPGEGEHKIMEYIRQAKAQPGYDPNVRHCLYGLDADL 209
Query: 238 IMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPI 297
IML L +H+ +F +LRE +T Q +K +
Sbjct: 210 IMLGLLSHDPYFCLLREEVTFGRQAQK----------------------------KSKEL 241
Query: 298 HKKKYQFLNIWVLREYLQYELD----IPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPT 353
+ + L++ ++REYL+ E F + ERI+DDF+ + FFVGNDFLP++P
Sbjct: 242 EHQNFYLLHLCIVREYLELEFQELQLTTKSGFVYDMERIIDDFILMAFFVGNDFLPNLPH 301
Query: 354 LEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVA---------VYED-Q 403
+ I EGA+ L+ Y+ MGGY+ + G + L R+ + ++ Y D +
Sbjct: 302 MHINEGALALMFTKYKEALPKMGGYINEYGSINLQRLGILLDHLSEFEFRFFEAEYSDAK 361
Query: 404 IFQKRTRIQQAYEYNEAMKLNARRESSEELLQ 435
+ +T + E N++ K S ++LL+
Sbjct: 362 WIRSKTSSSEVMESNDSQKSFTITPSQKKLLK 393
Score = 163 bits (413), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 82/173 (47%), Positives = 103/173 (59%), Gaps = 2/173 (1%)
Query: 451 YKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFAS 510
+K +YY +KF +E K + YV+GL WV YYY+ V SW W++ YHYAP S
Sbjct: 516 WKNKYYMEKFGHGLEDEAAMTK--LTENYVQGLQWVLFYYYRGVVSWPWYFQYHYAPMIS 573
Query: 511 DLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQ 570
D+K I F LG+PFRPF QLMG LP S +P Y +LMT P SPI FYP DF+
Sbjct: 574 DVKKGLGANIDFKLGQPFRPFQQLMGVLPDRSKKIVPTAYWDLMTSPESPIIDFYPRDFE 633
Query: 571 IDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVH 623
+DMNGK+ W+ VVK+PFIDE LL E LT EE RN + L + +
Sbjct: 634 LDMNGKKMEWEAVVKIPFIDEARLLPAMATREHLLTPEERARNEFGVTLKFTY 686
>gi|145242532|ref|XP_001393839.1| exonuclease Kem1 [Aspergillus niger CBS 513.88]
gi|134078390|emb|CAK40380.1| unnamed protein product [Aspergillus niger]
Length = 1406
Score = 305 bits (780), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 183/481 (38%), Positives = 265/481 (55%), Gaps = 82/481 (17%)
Query: 1 MGVPAFYRWLADRYP-LSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGI 59
MGVP F+RWL++RYP +S++ P EFDNLYLDMNGI
Sbjct: 1 MGVPKFFRWLSERYPAISMLIAENRIP---------------------EFDNLYLDMNGI 39
Query: 60 IHPCFHPDGKPAPT---SYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQR 116
IH C H D +PT + D +F +IF+YI+H++ ++P+KL ++A+DGVAPRAKMNQQR
Sbjct: 40 IHNCTHKDSD-SPTFRMTEDKMFIAIFNYIEHLYGKIKPKKLFFMAVDGVAPRAKMNQQR 98
Query: 117 TRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQ 176
RRFR A DA A KE A + KE E DSN ITPGT+FMA L+ L+
Sbjct: 99 ARRFRTALDAETA--------KEKAIAQGIEMPKE--EAFDSNCITPGTEFMAKLTEQLK 148
Query: 177 YFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDAD 236
YFI ++++ WQ +++LS VPGEGEHKIM YIR + P +DPN RHCLYGLDAD
Sbjct: 149 YFINKKISEDKDWQGVEIVLSGHEVPGEGEHKIMEYIRHAKAQPLYDPNVRHCLYGLDAD 208
Query: 237 LIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTP 296
LIML L +H+ HFS+LRE +T Q +K
Sbjct: 209 LIMLGLLSHDPHFSLLREEVTFGRQVQK----------------------------KSKE 240
Query: 297 IHKKKYQFLNIWVLREYLQYELDIPNP----PFPINFERIVDDFVFLCFFVGNDFLPHMP 352
+ + + L++ ++REYL+ E FP + E+++DDF+ + FFVGNDFLP++P
Sbjct: 241 LEHQNFYLLHLCMVREYLELEFQELEQEGVLSFPFDMEKVIDDFILMAFFVGNDFLPNLP 300
Query: 353 TLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQ 412
L I EGA+ + +Y+ MGGY+ + G + +DR+ + +++ E + F+
Sbjct: 301 NLHINEGALAFMFKIYKESLPKMGGYINEQGVIKMDRLGILLDALSDVEFRFFE------ 354
Query: 413 QAYEYNEAMKLNARRESSEELLQAPVAVADTVKLGEPGYKERY-YADKFEISNPEEIDKV 471
+EY++A + A++ E P + T P KE + K+ ++ PE+ +
Sbjct: 355 --HEYSDAQWIRAKKGEVTEPQSKPKGLTIT-----PAQKELFKQVKKYVLNRPEKAAET 407
Query: 472 K 472
K
Sbjct: 408 K 408
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 81/175 (46%), Positives = 108/175 (61%), Gaps = 6/175 (3%)
Query: 451 YKERYYADKFE--ISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPF 508
+K YY KF + + EE+ K++ YV+GL WV YYY+ + SW WF+ YHYAP
Sbjct: 505 WKNNYYVGKFGWGLDSHEEM----KELTENYVQGLQWVLYYYYRGIASWPWFFKYHYAPM 560
Query: 509 ASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPD 568
SD+K + + F LG+PFRP++QLMG LP S +P YR+LMT P SPI FYP D
Sbjct: 561 ISDVKKGLNADTNFRLGKPFRPYEQLMGVLPDRSKKTVPAAYRDLMTSPDSPIIDFYPRD 620
Query: 569 FQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVH 623
F++DMNGK+ W+ VVK+PFI+E+ LL E LT EE RN L + +
Sbjct: 621 FELDMNGKKMEWEAVVKIPFIEERRLLDALATREHLLTPEEKARNGFGASLKFTY 675
>gi|238579002|ref|XP_002388906.1| hypothetical protein MPER_12027 [Moniliophthora perniciosa FA553]
gi|215450629|gb|EEB89836.1| hypothetical protein MPER_12027 [Moniliophthora perniciosa FA553]
Length = 653
Score = 304 bits (779), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 160/384 (41%), Positives = 225/384 (58%), Gaps = 50/384 (13%)
Query: 48 EFDNLYLDMNGIIHPCFHPDGKPAP--TSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDG 105
EFDNLYLD NGIIH C HP+ + A S + +F SIF Y+DH+F +RP+KL ++A+DG
Sbjct: 14 EFDNLYLDFNGIIHNCSHPNDEDAHFRLSEEQIFTSIFAYVDHLFGKIRPKKLFFMAVDG 73
Query: 106 VAPRAKMNQQRTRRFRAAKDAAE----AEAEEERLRKEFEEAGKLLSAKEKPETCDSNVI 161
VAPRAKMNQQR+RRFR AK+A E AEA+ E+L E + DSN I
Sbjct: 74 VAPRAKMNQQRSRRFRTAKEAREVREKAEAKGEKLPDE--------------KAFDSNCI 119
Query: 162 TPGTQFMAVLSAALQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPG 221
TPGT FMA LS L+YF+ ++ + W+ +V+LS VPGEGEHKIM YIRL R P
Sbjct: 120 TPGTSFMAKLSEQLRYFVNKKITEDSNWRNVEVVLSGHEVPGEGEHKIMEYIRLSRAQPD 179
Query: 222 FDPNTRHCLYGLDADLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGK 281
++PN RHCLYGLDADLIML L +H+ HF +LRE + ++K
Sbjct: 180 YNPNMRHCLYGLDADLIMLGLLSHDPHFCLLREEVKFGPARKKT---------------- 223
Query: 282 PGDNPADWNGVDDTPIHKKKYQFLNIWVLREYLQYELD--IPNPPFPINFERIVDDFVFL 339
+ + + L++ + REYL E P PFP + ER++DDF+ L
Sbjct: 224 ------------NNSLESINFYLLHLSLFREYLDTEFHSIAPALPFPYSLERVIDDFILL 271
Query: 340 CFFVGNDFLPHMPTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAV 399
FVGNDFLP++P L I E + + VY+R ++ GY+ D+G + + R++ + +A
Sbjct: 272 AVFVGNDFLPNLPDLHIHENGLERIFEVYKRVLPSLDGYVNDSGTINMPRLQCILDEMAT 331
Query: 400 YEDQIFQKRTRIQQAYEYNEAMKL 423
+E ++F+K ++ +A +L
Sbjct: 332 WEQEVFEKEYADMSWFKGKQASQL 355
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 83/166 (50%), Positives = 108/166 (65%), Gaps = 6/166 (3%)
Query: 451 YKERYYADKFEIS--NPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPF 508
+K YY K EI+ +PEE+ K+ + +Y EGL WV YY+ V SW WFY YHYAP
Sbjct: 475 WKRDYYRTKLEINFDSPEEMGKL----IRRYAEGLQWVMHYYFSGVASWGWFYDYHYAPR 530
Query: 509 ASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPD 568
SDLK L ++ F LG+PF+PF+QLMG LP+AS +P+ Y LM DP SPI FYP
Sbjct: 531 ISDLKGLDEMSFDFELGKPFKPFEQLMGVLPSASKELVPQAYWPLMIDPVSPISHFYPLT 590
Query: 569 FQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNS 614
F++D+NGK+ W+ +VK+PFI+EK LL E L+ EE RNS
Sbjct: 591 FELDLNGKKQDWEAIVKIPFINEKELLAAMSSRENLLSSEECGRNS 636
>gi|242070073|ref|XP_002450313.1| hypothetical protein SORBIDRAFT_05g003583 [Sorghum bicolor]
gi|241936156|gb|EES09301.1| hypothetical protein SORBIDRAFT_05g003583 [Sorghum bicolor]
Length = 555
Score = 304 bits (779), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 172/439 (39%), Positives = 237/439 (53%), Gaps = 75/439 (17%)
Query: 228 HCLYGLDADLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQ----VGHLAAECHGKPG 283
HCLYGLDADLIML+LA+HE+HFSILRE + Q E C + + +C G
Sbjct: 2 HCLYGLDADLIMLALASHELHFSILREDVLRSTQPENCIPLSKELFKTEDSSRKCRGWFP 61
Query: 284 DNPADWNGVDDTPIHKKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFV 343
D +P KK YQFLNIWVLREYL+ +L IPNP + ER++DDF+F+CF
Sbjct: 62 RMTETTASRDRSP--KKPYQFLNIWVLREYLELDLKIPNPVVKTDIERLIDDFIFICFLT 119
Query: 344 GNDFLPHMPTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYE-- 401
GNDF+PH+P++EI EGAI+LL+ VY++ F MGGY+ + R+++ + A E
Sbjct: 120 GNDFIPHIPSVEIHEGAIDLLLEVYKQAFNKMGGYIVSTEK----RLQRNLVRRAAEEWK 175
Query: 402 -------------DQIFQKRTRIQQAYEYNEAMKLNA---RR------ESSEELLQAPVA 439
+ K + N + N RR + ++L+++
Sbjct: 176 ERNYDNMEENPDGPDLTVKSSSTNGGICTNSQVTANTLELRRNLKDTLRNKQDLVKSGAC 235
Query: 440 VADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVL----------------KYVEGL 483
D ++LG G+K R++ +KF + E+ K+K D+V+ KY+EGL
Sbjct: 236 KHDAIRLGFAGWKSRFFREKFGVEKSNEVGKLKNDMVMIFSCLCANKILIPVVQKYLEGL 295
Query: 484 CWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASS 543
CWV RYY+ DV SW W+YP++YAPF SD + LS S
Sbjct: 296 CWVLRYYFADVPSWSWYYPFYYAPFTSDFEGLS-------------------------HS 330
Query: 544 SALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEV 603
ALP+ YR LM + S I KFYP D QID +GKRF WQG+ LPFIDEKLL TK +E
Sbjct: 331 CALPKCYRELMENEESLIKKFYPSDLQIDTHGKRFLWQGIAMLPFIDEKLLTSATKTVED 390
Query: 604 FLTEEELFRNSVMLDLLYV 622
L E+ RN+V D +++
Sbjct: 391 KLAVHEINRNTVRQDKIFL 409
>gi|255728793|ref|XP_002549322.1| 5'-3' exoribonuclease 1 [Candida tropicalis MYA-3404]
gi|240133638|gb|EER33194.1| 5'-3' exoribonuclease 1 [Candida tropicalis MYA-3404]
Length = 1513
Score = 304 bits (779), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 170/411 (41%), Positives = 245/411 (59%), Gaps = 60/411 (14%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MG+P F+R++++R+PL I +++E+ Q+ EFDNLYLDMN I+
Sbjct: 1 MGIPKFFRFISERWPL-ISQLIDEN-QIP------------------EFDNLYLDMNSIL 40
Query: 61 HPCFHPDGKPAPTSYDD-VFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRR 119
H C H + DD ++ +IF+YIDH+F +++P+K Y+AIDGVAPRAKMNQQR RR
Sbjct: 41 HACTHSNDDTLTRLTDDQMYSAIFNYIDHLFQIIKPKKTFYMAIDGVAPRAKMNQQRARR 100
Query: 120 FRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFI 179
FR A +A EE L+K A + KE P DSN ITPGT+FM+ L+ L+YFI
Sbjct: 101 FRTAYEA------EENLKKAI--ANGEVIPKEDP--FDSNSITPGTEFMSKLTVNLKYFI 150
Query: 180 QARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIM 239
++ + W +ILS VPGEGEHKIM YIR R+ P ++PN RHC+YGLDADLIM
Sbjct: 151 HKKITEDSNWANIDIILSGHEVPGEGEHKIMEYIRAIRSQPEYNPNLRHCIYGLDADLIM 210
Query: 240 LSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIHK 299
LSL TH+ HF++LRE +T G +K + D +
Sbjct: 211 LSLVTHDPHFALLREEVTF-GPSKKS--------------------------LGDKDLSD 243
Query: 300 KKYQFLNIWVLREYLQYEL-DIPNP-PFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIR 357
+K+ L+I +LREYL E D+ N F NFERI+DDF+ + + +GNDFLP++P L I
Sbjct: 244 QKFFLLHISLLREYLSLEFQDLENQLTFEYNFERILDDFILIMYVIGNDFLPNLPDLFIN 303
Query: 358 EGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKR 408
+GA LL+ V ++ GY+ + G++ L R+ + + ++ +E + F+K+
Sbjct: 304 KGAFPLLIAVIKQALLDSDGYINENGKINLKRLNIYFKKLSNFEFENFEKK 354
Score = 152 bits (385), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 108/290 (37%), Positives = 158/290 (54%), Gaps = 29/290 (10%)
Query: 351 MPTLEIREGAINLLMHVYRREFTAMGGYL------TDAGEVLLDRVEKFIQSVAVYE--D 402
+PTL++ + + + + +EF G+L D E +D V+ I + + E D
Sbjct: 419 LPTLKLNKDDVENNLD-FIKEFALQAGFLIIHSKSNDTYEAKID-VDGIIPTESEEERND 476
Query: 403 QIFQKRTRIQQAYEYNEAMKLNARRESSEELLQAPVAVADTVKLGEPGYKERYYADKFEI 462
+I + R I++ Y+ E ++ SEE+L +V + K + +K+ YY K
Sbjct: 477 RINELRKTIKE-YQSAELIE-------SEEVLNETKSVY-SHKFED--WKDNYYKSKLHF 525
Query: 463 SNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLK------DLS 516
S E+ +++ K + YVEGL WV YYY+ V SW WFY YHYAP SD+ +
Sbjct: 526 SIKEDKEELLK-LTTHYVEGLQWVLYYYYRGVPSWNWFYKYHYAPRISDISLGLEYLIEN 584
Query: 517 DLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGK 576
++E+TF PF+PF+QLM LPA S +P YR LMTD SPI FYP + IDMNGK
Sbjct: 585 NIELTFEKSHPFKPFEQLMAVLPARSRKLMPLVYRPLMTDEKSPIINFYPHEVDIDMNGK 644
Query: 577 RFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVH-PQ 625
+W+ VV L F+DEK L+ K +E LT +E RNS + ++H PQ
Sbjct: 645 TASWEAVVLLDFVDEKKLIDVLKPIEEKLTPDETARNSYGSPIKFIHNPQ 694
>gi|115437844|ref|XP_001217914.1| hypothetical protein ATEG_09292 [Aspergillus terreus NIH2624]
gi|114188729|gb|EAU30429.1| hypothetical protein ATEG_09292 [Aspergillus terreus NIH2624]
Length = 1413
Score = 304 bits (779), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 179/453 (39%), Positives = 257/453 (56%), Gaps = 78/453 (17%)
Query: 1 MGVPAFYRWLADRYP-LSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGI 59
MGVP F+RWL++RYP +S++ P EFDNLYLDMNGI
Sbjct: 1 MGVPKFFRWLSERYPAISMLIAENRIP---------------------EFDNLYLDMNGI 39
Query: 60 IHPCFHPDGKPAPT---SYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQR 116
IH C H D +PT + D +F +IF+YI+H++ ++P+KL ++A+DGVAPRAKMNQQR
Sbjct: 40 IHNCTHKDSD-SPTFRMTEDKMFIAIFNYIEHLYGKIKPKKLFFMAVDGVAPRAKMNQQR 98
Query: 117 TRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQ 176
RRFR A DA A+ E+A K + DSN ITPGT+FMA L+ L+
Sbjct: 99 ARRFRTALDAEVAK----------EKAIAQGVEMPKEDAFDSNCITPGTEFMAKLTEQLK 148
Query: 177 YFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDAD 236
YFI ++++ WQ +++LS VPGEGEHKIM YIR + PG+DPN RHCLYGLDAD
Sbjct: 149 YFISKKISEDKDWQGVEIVLSGHEVPGEGEHKIMEYIRHAKAQPGYDPNVRHCLYGLDAD 208
Query: 237 LIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTP 296
LIML L +H+ HF +LRE +T Q +K KP +
Sbjct: 209 LIMLGLLSHDPHFCLLREEVTFGRQVQK----------------KPKE------------ 240
Query: 297 IHKKKYQFLNIWVLREYLQYELDIPNP----PFPINFERIVDDFVFLCFFVGNDFLPHMP 352
+ + + L++ ++REYL+ E FP + ER++DDF+ + FFVGNDFLP++P
Sbjct: 241 LEHQNFYLLHLSMVREYLELEFQELEQEGALKFPFDMERVIDDFILMAFFVGNDFLPNLP 300
Query: 353 TLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQ 412
L I EGA+ L+ +Y+ MGGY+ + G + L+R+ + ++ E + F+
Sbjct: 301 NLHINEGALALMFKIYKEILPKMGGYINEQGVINLERLGVLLDGLSDVEFRFFEA----- 355
Query: 413 QAYEYNEAMKLNARRESSE--ELLQAPVAVADT 443
EY++A + A++ +E EL + P + T
Sbjct: 356 ---EYSDARWIKAKKNGTETMELQEKPKGLTVT 385
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 95/239 (39%), Positives = 135/239 (56%), Gaps = 9/239 (3%)
Query: 451 YKERYYADKFE--ISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPF 508
+K++YY KF+ + N EE+ K+ ++ YV+GL WV YYY+ + SW WF+ YHYAP
Sbjct: 508 WKDKYYTSKFDWGLENAEEMRKLTEN----YVQGLQWVLFYYYRGIASWPWFFGYHYAPM 563
Query: 509 ASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPD 568
SD+K ++ F LG+PFRP++QLMG LP S +P YR+LMT P SPI FYP D
Sbjct: 564 ISDVKKGLKADMNFRLGQPFRPYEQLMGVLPDRSKKIVPPAYRDLMTSPESPIIDFYPRD 623
Query: 569 FQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVHPQHPL 628
F++DMNGK+ W+ VVK+PFIDEK LL K E LT +E RN L + +
Sbjct: 624 FELDMNGKKMEWEAVVKIPFIDEKRLLDALKTREHLLTPDEKARNGFGASLKFTYSPEVQ 683
Query: 629 YQQITLYCQLYHQLPPQDRFAWEIDVNASGGMNGYIWLCERNGLRSIIPSPVKGLPDIE 687
Y + ++ +P D+ G+ YI L + L + S + G P ++
Sbjct: 684 YVYPSSLPGVFPDIPNCHCIENIFDLPTMDGLEPYIGLVDGVQLGA---SALAGFPSLK 739
>gi|212645611|ref|NP_496945.3| Protein XRN-1 [Caenorhabditis elegans]
gi|194680614|emb|CAC35856.3| Protein XRN-1 [Caenorhabditis elegans]
Length = 1591
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 174/420 (41%), Positives = 242/420 (57%), Gaps = 53/420 (12%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP FYRW ++RYP + +V+ E Q+ EFDNLYLDMNGII
Sbjct: 1 MGVPKFYRWTSERYPC-LSEVINES-QIP------------------EFDNLYLDMNGII 40
Query: 61 HPCFHPDGKPAP--TSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C HP+ + D++F +IF YI++++ L+RP+K+ ++A+DGVAPRAKMNQQR R
Sbjct: 41 HNCSHPNDDDVTFRITEDEIFVNIFAYIENLYNLIRPQKVFFMAVDGVAPRAKMNQQRAR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RF +A+ A +L K E G+++ ++ + DSN ITPGT FM L L +
Sbjct: 101 RFMSARTA------HTQLAKALEN-GEIMPSEAR---FDSNCITPGTYFMTRLHQKLDDW 150
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
I+ + WQ K+ILS NVPGEGEHKIM +IR +R +DPNTRHC+YGLDADLI
Sbjct: 151 IKTKSATDSRWQGRKIILSGHNVPGEGEHKIMDFIRTERAGSSYDPNTRHCMYGLDADLI 210
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
ML + +HE HFS+LRE +T + K DN A T
Sbjct: 211 MLGIVSHEPHFSLLREEVTFNTRPRK------------------NDNKAT-KKPKRTDSD 251
Query: 299 KKKYQFLNIWVLREYLQYEL-DIPNP-PFPINFERIVDDFVFLCFFVGNDFLPHMPTLEI 356
KK+ L++ +LREYL +E D+ + PF ERIVDD++ L VGNDFLPH+P + I
Sbjct: 252 VKKFHLLHLSLLREYLAWEFADVKDSLPFEYEMERIVDDWILLGLLVGNDFLPHLPNIHI 311
Query: 357 REGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYE 416
+ A+ LL Y++ + GY+ +AG + L R E F+ +A+ + F +R +Q E
Sbjct: 312 HDDALPLLYSTYKKVLPTLDGYINEAGYLNLSRFEAFLAELALNDKTSFMERLEDEQFME 371
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 76/167 (45%), Positives = 100/167 (59%), Gaps = 6/167 (3%)
Query: 451 YKERYYADKFEISNPEEIDKVK-KDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFA 509
+K+ YY+DK N I K + ++ YV + W YYY SW WFYP+HYAPF
Sbjct: 495 HKKTYYSDKLRYKN---ISKQQLREQAEGYVRAIQWNLHYYYHGCVSWSWFYPHHYAPFI 551
Query: 510 SDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLM-TDPS-SPIYKFYPP 567
SD++ + + F L EPF PF+QL+ LP AS+ LP R LM +DP+ SPI FYP
Sbjct: 552 SDVRGFVGMRMEFELSEPFHPFEQLLAVLPEASADCLPRPLRELMSSDPAKSPICDFYPA 611
Query: 568 DFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNS 614
+F+ D+NGKR W+ VV +PFI+EK LL + LT EE RNS
Sbjct: 612 NFETDLNGKRNEWEAVVLIPFIEEKRLLEAIEAKRSRLTSEENARNS 658
>gi|324500092|gb|ADY40054.1| 5'-3' exoribonuclease 1 [Ascaris suum]
Length = 1700
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 180/443 (40%), Positives = 249/443 (56%), Gaps = 72/443 (16%)
Query: 1 MGVPAFYRWLADRYP-LSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGI 59
MGVP FYRW+++RYP LS V ++ P EFDNLYLDMNGI
Sbjct: 1 MGVPKFYRWISERYPCLSEVVTHKQIP---------------------EFDNLYLDMNGI 39
Query: 60 IHPCFHPDGKPAP--TSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRT 117
IH C HP+ + S + +F+ IF+YID +F ++ P+++ ++AIDGVAPRAKMNQQR
Sbjct: 40 IHGCTHPNDEDISFRISEEQIFRDIFNYIDTLFSIIEPKRVFFMAIDGVAPRAKMNQQRA 99
Query: 118 RRFRAAKDA------AEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVL 171
RRF +AK+A AE++ +E K F D N ITPGT+FMA L
Sbjct: 100 RRFMSAKNAELALKIAESKGQEIPKEKRF----------------DPNCITPGTEFMARL 143
Query: 172 SAALQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLY 231
LQYFI+ +++ WQ +V LS N PGEGEHKIM +IR +R+ P +D NTRHCLY
Sbjct: 144 HEQLQYFIKMKISTDTAWQGIRVYLSGHNCPGEGEHKIMDFIRSERSQPDYDANTRHCLY 203
Query: 232 GLDADLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNG 291
GLDADLIML L +HE HFS+LRE + G+ K K P G
Sbjct: 204 GLDADLIMLGLCSHEPHFSLLREEVKF-GRPPK---------------HKHKSTPK--TG 245
Query: 292 VDDTPIHKKKYQFLNIWVLREYLQYELD--IPNPPFPINFERIVDDFVFLCFFVGNDFLP 349
VD H L++ +LREYL +E FP + E ++DD+V + F VGNDF+P
Sbjct: 246 VDGITFH-----LLHLSLLREYLSWEFRPIQDKLSFPYDMESVIDDWVLMGFLVGNDFIP 300
Query: 350 HMPTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRT 409
H+P + I E A+ L Y + + GYL +AG + L R EKF+++ + + Q F +R
Sbjct: 301 HLPHVHIHEDALPALYSTYVQVLPQLDGYLNEAGILNLKRFEKFLKAFSKIDRQSFMQRM 360
Query: 410 RIQQAYEYNEAMKLNARRESSEE 432
+ Y ++ + +++RE E+
Sbjct: 361 E-DEDYLASKRTQPSSKREPKEK 382
Score = 165 bits (418), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 82/174 (47%), Positives = 105/174 (60%), Gaps = 6/174 (3%)
Query: 451 YKERYYADKFEISN--PEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPF 508
+K YY DK N EE+ ++ Y+ + W YYY CSW WFYP+HYAP+
Sbjct: 491 HKRNYYNDKMNYKNISKEEL----REQAEGYIRAIQWNLHYYYHGCCSWNWFYPHHYAPY 546
Query: 509 ASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPD 568
SD+ D +D+EI F L PF PF+QLM LPAAS+ LP + LM D SSPI +FYP D
Sbjct: 547 ISDVTDFADMEINFELSAPFHPFEQLMAVLPAASADCLPVPLQELMFDESSPILEFYPRD 606
Query: 569 FQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYV 622
F+ D+NGK+ W+ VV +PFI+EK LL E LT+EE RNS LL+
Sbjct: 607 FETDLNGKKNDWEAVVLIPFINEKRLLDAIASKEARLTDEERRRNSHGPHLLFT 660
>gi|347831559|emb|CCD47256.1| similar to 5'-3' exoribonuclease 1 [Botryotinia fuckeliana]
Length = 1389
Score = 303 bits (775), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 164/407 (40%), Positives = 234/407 (57%), Gaps = 64/407 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP F+RW+++RYP SI ++ E+ EFD LYLDMNGII
Sbjct: 1 MGVPKFFRWMSERYP-SISQLIAEN-------------------RIPEFDCLYLDMNGII 40
Query: 61 HPCFHPDGKPAP--TSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C H D A + + +F +IF+YI+H++ ++P++L Y+A+DGVAPRAKMNQQR R
Sbjct: 41 HNCTHKDSDDATFRMTEEQMFIAIFNYIEHLYGKIKPKQLFYMAVDGVAPRAKMNQQRAR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RFR A D A E+ KE +E K + DSN ITPGT+FM L+ L+YF
Sbjct: 101 RFRTALDVENAR---EKAIKEGKEM-------PKEDAFDSNSITPGTEFMQKLTLQLKYF 150
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
I ++++ WQ T+++LS VPGEGEHKIM YIRL++ P +DPN RHCLYGLDADLI
Sbjct: 151 IAKKISEDVDWQGTEIVLSGHEVPGEGEHKIMEYIRLKKAQPDYDPNRRHCLYGLDADLI 210
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
ML L +H+ HF +LRE +T G+Q K +
Sbjct: 211 MLGLLSHDPHFCLLREEVTF-GRQSKA---------------------------KSKELE 242
Query: 299 KKKYQFLNIWVLREYLQYELDIPNP----PFPINFERIVDDFVFLCFFVGNDFLPHMPTL 354
+ + +++ ++REYL+ E FP + ER++DDF+ + FFVGNDFLP++P L
Sbjct: 243 HQNFYLMHLCIVREYLELEFQELKEDGVLGFPFDLERVIDDFILMAFFVGNDFLPNLPNL 302
Query: 355 EIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYE 401
I EGA+ L+ VY+ GGY+ + G + + R+ ++ ++ E
Sbjct: 303 HINEGALALMFKVYKTILPKGGGYINEGGVINMSRLAILLEELSHVE 349
Score = 169 bits (427), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 90/214 (42%), Positives = 124/214 (57%), Gaps = 10/214 (4%)
Query: 410 RIQQAYEYNEAMKLNARRESSEELLQAPVAVADTVKLGEPGYKERYYADKFEISNPEEID 469
RI + Y+ E + + S+E QA + K E +K++YY KFE EI+
Sbjct: 473 RIVKQYDKAEVLDV------SKEQAQAEMERKYEEKFQE--WKDKYYEGKFEWDRKNEIE 524
Query: 470 KVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDLEITFFLGEPFR 529
K + YV+GL WV YYY+ V SW W+Y YHY+P SD+ ++ F LG+PF
Sbjct: 525 LTK--LCENYVQGLQWVLYYYYRGVVSWPWYYQYHYSPMISDVIKGLKADVNFKLGQPFH 582
Query: 530 PFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFI 589
PF+QLMG LP S +P Y +LMT+P+SPI FYP DF++DMNGK+ W+ VVK+PFI
Sbjct: 583 PFEQLMGVLPDRSKKIVPTVYHDLMTNPASPIIDFYPRDFELDMNGKKMEWEAVVKIPFI 642
Query: 590 DEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVH 623
DEK LL L++ E FRN + L + +
Sbjct: 643 DEKRLLDAMATKNNLLSDAEKFRNEFGVSLKFTY 676
>gi|156050179|ref|XP_001591051.1| hypothetical protein SS1G_07676 [Sclerotinia sclerotiorum 1980]
gi|154692077|gb|EDN91815.1| hypothetical protein SS1G_07676 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 1390
Score = 302 bits (774), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 163/407 (40%), Positives = 231/407 (56%), Gaps = 64/407 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP F+RW+++RYP SI ++ E+ EFD LYLDMNGII
Sbjct: 1 MGVPKFFRWMSERYP-SISQLIAEN-------------------RIPEFDCLYLDMNGII 40
Query: 61 HPCFHPDGKPAP--TSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C H D A + + +F +IF+YI+H++ ++P++L ++A+DGVAPRAKMNQQR R
Sbjct: 41 HNCTHKDSDDATFRMTEEQMFIAIFNYIEHLYGKIKPKQLFFMAVDGVAPRAKMNQQRAR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RFR A D A + R KE K E DSN ITPGT+FM L+ L+YF
Sbjct: 101 RFRTALDVENAREKAIREGKEMP----------KEEAFDSNSITPGTEFMQKLTLQLKYF 150
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
I ++++ WQ T+++LS VPGEGEHKIM YIRL++ P +DPN RHCLYGLDADLI
Sbjct: 151 IAKKISEDVDWQGTEIVLSGHEVPGEGEHKIMEYIRLKKAQPDYDPNRRHCLYGLDADLI 210
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
ML L +H+ HF +LRE +T G+Q K +
Sbjct: 211 MLGLLSHDPHFCLLREEVTF-GRQSKA---------------------------KSKELE 242
Query: 299 KKKYQFLNIWVLREYLQYELDIPNP----PFPINFERIVDDFVFLCFFVGNDFLPHMPTL 354
+ + +++ ++REYL+ E FP + ER++DDF+ + FFVGNDFLP++P L
Sbjct: 243 HQNFYLMHLCIVREYLELEFQELKGDGVLGFPFDLERVIDDFILMAFFVGNDFLPNLPNL 302
Query: 355 EIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYE 401
I EGA+ L+ VY+ GGY+ + G + + R+ + ++ E
Sbjct: 303 HINEGALALMFKVYKTILPKGGGYINEGGVINMSRLAILLDELSHVE 349
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 86/208 (41%), Positives = 121/208 (58%), Gaps = 8/208 (3%)
Query: 416 EYNEAMKLNARRESSEELLQAPVAVADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDV 475
+Y++A L+ RE + QA + K E +K++YY KFE E + ++
Sbjct: 478 QYDKAEVLDVTREQA----QAEMDRKYEEKFQE--WKDKYYDGKFEWDRKNETELT--NL 529
Query: 476 VLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLM 535
YV+GL WV YYY+ V SW W+Y YHY+P SD+ ++ F LG+PF PF+QLM
Sbjct: 530 CENYVQGLQWVLYYYYRGVVSWPWYYQYHYSPMISDVIKGLKADVNFKLGQPFHPFEQLM 589
Query: 536 GTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLL 595
G LP S +P Y +LMT+P+SPI FYP DF++DMNGK+ W+ VVK+PFIDEK LL
Sbjct: 590 GVLPDRSKKIVPTVYHDLMTNPASPIIDFYPRDFELDMNGKKMEWEAVVKIPFIDEKRLL 649
Query: 596 RQTKKLEVFLTEEELFRNSVMLDLLYVH 623
L++ E RN + L + +
Sbjct: 650 DAMATKNNLLSDAEKARNEFGVSLKFTY 677
>gi|116199173|ref|XP_001225398.1| hypothetical protein CHGG_07742 [Chaetomium globosum CBS 148.51]
gi|88179021|gb|EAQ86489.1| hypothetical protein CHGG_07742 [Chaetomium globosum CBS 148.51]
Length = 1420
Score = 302 bits (774), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 174/438 (39%), Positives = 250/438 (57%), Gaps = 70/438 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP F+RWL++RYP +I ++ E+ EFD LYLDMNGII
Sbjct: 1 MGVPKFFRWLSERYP-AISQLIAEN-------------------RIPEFDCLYLDMNGII 40
Query: 61 HPCFHPDGKPAP--TSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C H D S +++F +IF+YI+H+F ++P+KL ++AIDGVAPRAKMNQQR R
Sbjct: 41 HNCTHKDSDDVQFRLSEEEMFIAIFNYIEHLFGKIKPKKLFFMAIDGVAPRAKMNQQRAR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RFR A +A E+ R + + GK L K E DSN ITPGT+FMA L+ L+YF
Sbjct: 101 RFRTALEA-------EKARDKAIKEGKELP---KEEPFDSNCITPGTEFMAKLTQQLKYF 150
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
I ++++ WQ +++LS VPGEGEHKIM YIR R P ++PN RHCLYGLDADLI
Sbjct: 151 INKKVSEDRDWQQPEIVLSGHEVPGEGEHKIMEYIRNARAQPEYNPNVRHCLYGLDADLI 210
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
ML L +H+ HF +LRE +T G+Q K H + E +
Sbjct: 211 MLGLLSHDPHFCLLREEVTF-GRQAK--------HKSKE-------------------LE 242
Query: 299 KKKYQFLNIWVLREYLQYEL-DIPNP---PFPINFERIVDDFVFLCFFVGNDFLPHMPTL 354
+ + +++ ++REYL+ E D+ FP + E+++DDF+ + FFVGNDFLP++P L
Sbjct: 243 HQNFYLMHLCIVREYLELEFQDLKKEGAMSFPFDMEKVIDDFILMAFFVGNDFLPNLPHL 302
Query: 355 EIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRT----- 409
I EGA+ + +Y+ GY+ + G+V L R+ + + + E + F+
Sbjct: 303 HINEGALATMFRIYKSVLPKCDGYINENGKVNLQRLSRLLDELGKEEYRFFEHENEDESW 362
Query: 410 -RIQQAYEYNEAMKLNAR 426
R ++ E +E KL A+
Sbjct: 363 LRGKRMLENDETEKLRAK 380
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 76/173 (43%), Positives = 108/173 (62%)
Query: 451 YKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFAS 510
+K+ YY KFE P+ ++ + + YV+GL WV YYY+ + SW WFY YHY+P S
Sbjct: 504 WKDEYYDQKFEDWTPDNREEELRKLTENYVQGLQWVLYYYYRGIASWPWFYAYHYSPMIS 563
Query: 511 DLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQ 570
D+ + ++ F LG+PFRP +QLMG LP S +P+ Y LMTDP SPI FYP DF+
Sbjct: 564 DVVKGLNADLNFKLGQPFRPNEQLMGVLPDRSKKIVPKVYWELMTDPKSPIIDFYPRDFE 623
Query: 571 IDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVH 623
+DMNGK+ W+ V+K+PFI+EK LL + L++ E RN + L + +
Sbjct: 624 LDMNGKKMDWEAVIKIPFIEEKRLLSAMAPKDALLSDAEKARNDFGVALKFTY 676
>gi|384488412|gb|EIE80592.1| 5'-3' exoribonuclease 1 [Rhizopus delemar RA 99-880]
Length = 1739
Score = 302 bits (774), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 157/366 (42%), Positives = 221/366 (60%), Gaps = 48/366 (13%)
Query: 48 EFDNLYLDMNGIIHPCFH--PDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDG 105
EFDNLYLDMNGI+H C H D + + +++ IF Y+DH+F ++P+KL ++AIDG
Sbjct: 504 EFDNLYLDMNGIVHNCSHNNSDDPHYRITEEQIWRGIFQYMDHLFSKIKPKKLFFVAIDG 563
Query: 106 VAPRAKMNQQRTRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPET--CDSNVITP 163
VAPRAKMNQQR+RRFR AKDA +A + L +E PE D+N ITP
Sbjct: 564 VAPRAKMNQQRSRRFRTAKDAEDARQK------------ALAKGEELPEQDPFDTNCITP 611
Query: 164 GTQFMAVLSAALQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFD 223
GT+FM L+ L+YFI ++++ W+ ++ILS VPGEGEHKIM YIRL + P ++
Sbjct: 612 GTEFMIKLTQQLRYFISKKVSEDADWRNVQIILSGPEVPGEGEHKIMEYIRLAKAQPDYN 671
Query: 224 PNTRHCLYGLDADLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPG 283
PNTRHCLYGLDADL+ML L +H+ HF++LRE +T Q+K
Sbjct: 672 PNTRHCLYGLDADLLMLGLLSHDPHFALLREEVTFGRNQKKKI----------------- 714
Query: 284 DNPADWNGVDDTPIHKKKYQFLNIWVLREYLQYELDI--PNPPFPINFERIVDDFVFLCF 341
G+D+ + + L++ ++REYL E PFP +FER+VDDF+ L
Sbjct: 715 -------GLDN-----QNFYLLHLCLIREYLDMEFSALKTTLPFPYDFERVVDDFILLAL 762
Query: 342 FVGNDFLPHMPTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVA-VY 400
F+GNDFLPH+P + I EGA+ L+ +Y+ GYL D G V + R++K + ++ V
Sbjct: 763 FIGNDFLPHLPNIHINEGALGLMFKIYKETLPTCEGYLQDGGRVDMTRLQKVLDQISTVV 822
Query: 401 EDQIFQ 406
E + F+
Sbjct: 823 EKEAFE 828
Score = 171 bits (432), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 92/212 (43%), Positives = 129/212 (60%), Gaps = 13/212 (6%)
Query: 401 EDQIFQKRTRIQQAYEYNEAMKLNARRESSEELLQAPVAVADTVKLGEPGYKERYYADKF 460
+++ R R+ + YE + + + RE E+ +A A +K YY DK
Sbjct: 957 DEEAIAARDRVLKKYENADIVPEDIDREQIEKEEKAQFEAAFE------QWKAEYYKDKM 1010
Query: 461 --EISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDL 518
+I++ +E++K+ + YV G+ WV +YYY V SW WFYPYHYAP SDL ++
Sbjct: 1011 NIDINDSQEMEKL----IGSYVIGIQWVLQYYYNGVASWGWFYPYHYAPKISDLTNIVRF 1066
Query: 519 E-ITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKR 577
+ TF LG+PF+P++QLMG LP S LP Y+ LMTDPSSPI FYP DF +DMNGK+
Sbjct: 1067 QDHTFTLGQPFKPYEQLMGVLPMLSKKLLPAAYQELMTDPSSPIIDFYPTDFDMDMNGKK 1126
Query: 578 FAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEE 609
+W+ +VK+PFIDEK LL K E LT++E
Sbjct: 1127 QSWEAIVKIPFIDEKRLLDAMKSREHRLTKDE 1158
>gi|308480687|ref|XP_003102550.1| CRE-XRN-1 protein [Caenorhabditis remanei]
gi|308261282|gb|EFP05235.1| CRE-XRN-1 protein [Caenorhabditis remanei]
Length = 1668
Score = 302 bits (773), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 169/423 (39%), Positives = 246/423 (58%), Gaps = 60/423 (14%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP FYRW ++RYP + +V+ E Q+ EFDNLYLDMNGII
Sbjct: 1 MGVPKFYRWTSERYPC-LSEVINES-QIP------------------EFDNLYLDMNGII 40
Query: 61 HPCFHPDGKPAP--TSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C HP+ + +++F +IF YI++++ L+RP+K+ ++A+DGVAPRAKMNQQR R
Sbjct: 41 HNCSHPNDDDVTFRITEEEIFINIFAYIENLYNLIRPQKVFFMAVDGVAPRAKMNQQRAR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEA---GKLLSAKEKPETCDSNVITPGTQFMAVLSAAL 175
RF +A+ A + E+A G++L +++ DSN ITPGT FM L L
Sbjct: 101 RFMSARTA----------NSQMEKAIANGEILPTEKR---FDSNCITPGTYFMTRLHNKL 147
Query: 176 QYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDA 235
+I+ + WQ K+ILS NVPGEGEHKIM +IR +R G+DPNTRHC+YGLDA
Sbjct: 148 DEWIKKKSASDSHWQGRKIILSGHNVPGEGEHKIMDFIRTERAKSGYDPNTRHCMYGLDA 207
Query: 236 DLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDT 295
DLIML + +HE HFS+LRE +T + K + + KP +D
Sbjct: 208 DLIMLGIVSHEPHFSLLREEVTFNSRPRK----------NEQKNKKPKRTDSD------- 250
Query: 296 PIHKKKYQFLNIWVLREYLQYEL-DIPNP-PFPINFERIVDDFVFLCFFVGNDFLPHMPT 353
K + L++ +LREYL +E D+ PF + ERIVDD++ + VGNDFLPH+P+
Sbjct: 251 ---VKTFHLLHLSLLREYLAWEFADVKESLPFAYDMERIVDDWIMMGLLVGNDFLPHLPS 307
Query: 354 LEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQ 413
+ I + A+ LL Y++ + GY+ ++G + L R EKF++ +++ + F + +Q
Sbjct: 308 IHIHDDALPLLYSTYKKVLPTLDGYINESGYLNLARFEKFLEQLSLNDKNSFMDKLEDEQ 367
Query: 414 AYE 416
E
Sbjct: 368 FME 370
Score = 142 bits (357), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 71/167 (42%), Positives = 103/167 (61%), Gaps = 6/167 (3%)
Query: 451 YKERYYADKFEISNPEEIDKVK-KDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFA 509
+K+ YY++K N I K + + YV + W YYY SW WFYP+HYAPF
Sbjct: 492 HKKSYYSNKLRYKN---ISKTELRAQAEGYVRAIQWNLHYYYHGCVSWSWFYPHHYAPFI 548
Query: 510 SDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLM-TDPS-SPIYKFYPP 567
SD++ ++++I F L +PF PF+QL+ LP AS+ LP+ + LM +DP+ S I+ FYP
Sbjct: 549 SDVRGFANMKIEFELSQPFHPFEQLLAVLPEASADCLPKPLQELMSSDPTKSMIHDFYPA 608
Query: 568 DFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNS 614
+F+ D+NGKR W+ VV +PFI+EK LL + L+ EE RN+
Sbjct: 609 NFETDLNGKRNDWEAVVLIPFIEEKRLLEAIESKRNRLSREENMRNT 655
>gi|302697115|ref|XP_003038236.1| hypothetical protein SCHCODRAFT_255205 [Schizophyllum commune H4-8]
gi|300111933|gb|EFJ03334.1| hypothetical protein SCHCODRAFT_255205 [Schizophyllum commune H4-8]
Length = 1480
Score = 302 bits (773), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 145/255 (56%), Positives = 192/255 (75%), Gaps = 3/255 (1%)
Query: 2 GVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGIIH 61
GVPA +RWL+ +YP + V+EE+P+ G+ V P+D S NPNG+EFDNLYLDMNGI+H
Sbjct: 10 GVPALFRWLSKKYPKIVQPVIEEEPRQIGDEVI-PIDASGRNPNGVEFDNLYLDMNGIVH 68
Query: 62 PCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRFR 121
PC HP+GKPAP + +++ IF+Y + + +VRPRKLL++AIDGVAPRAKMNQQR+RRFR
Sbjct: 69 PCTHPEGKPAPETEEEMMVEIFNYTERVVNMVRPRKLLFMAIDGVAPRAKMNQQRSRRFR 128
Query: 122 AAKDAAEAEAEEERLRKEFEEAGKLLSAKEK-PETC-DSNVITPGTQFMAVLSAALQYFI 179
A+++A E E + ++ GK L+ + K P+ DSN ITPGT FM +L+ +L+Y+
Sbjct: 129 ASQEAQEKEDARAESLELWKSMGKELTDEMKNPKAAWDSNAITPGTPFMTLLANSLRYWT 188
Query: 180 QARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIM 239
++N+ P W+ +VI+SDA+VPGEGEHKIM +IR QR PG DPNT H +YGLDADLIM
Sbjct: 189 VQKMNEDPAWKGIQVIISDASVPGEGEHKIMDFIRRQRVNPGHDPNTEHVIYGLDADLIM 248
Query: 240 LSLATHEIHFSILRE 254
LSLATHE HF +LRE
Sbjct: 249 LSLATHEPHFRVLRE 263
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/52 (57%), Positives = 37/52 (71%), Gaps = 2/52 (3%)
Query: 441 ADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQ 492
AD V+L EPGYKERYY +KF +E + +KDV KY+EGL WV +YYYQ
Sbjct: 554 ADHVQLWEPGYKERYYKNKFGKEYSDE--EFRKDVTTKYMEGLAWVLQYYYQ 603
>gi|156839563|ref|XP_001643471.1| hypothetical protein Kpol_1006p9 [Vanderwaltozyma polyspora DSM
70294]
gi|156114083|gb|EDO15613.1| hypothetical protein Kpol_1006p9 [Vanderwaltozyma polyspora DSM
70294]
Length = 1292
Score = 301 bits (772), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 164/415 (39%), Positives = 241/415 (58%), Gaps = 64/415 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MG+P F+R++ +R+PL I+ ++E D N EFDNLYLDMN I+
Sbjct: 1 MGIPKFFRYICERWPL-ILQLIEND-------------------NVPEFDNLYLDMNSIL 40
Query: 61 HPCFHPD-----GKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQ 115
H C H D G P + +++F IF YIDH+F L++P+K+ Y+AIDGVAPRAKMNQQ
Sbjct: 41 HSCSHGDRGDTEGIIKPLTEEEIFTRIFIYIDHLFQLIKPKKVFYMAIDGVAPRAKMNQQ 100
Query: 116 RTRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAAL 175
R+RRFR A E E+ + E G ++S + KP D N ITPGT FM L+ L
Sbjct: 101 RSRRFRTA-------MENEKAMNKIIENGGVISEEIKP--FDPNAITPGTTFMEKLTKYL 151
Query: 176 QYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDA 235
+YFI +++ W ++ILS VPGEGEHKIM YIR +R+ G++PN RHC+YGLDA
Sbjct: 152 KYFIHDKISNDINWANIEIILSGHEVPGEGEHKIMDYIRKKRSQKGYNPNLRHCIYGLDA 211
Query: 236 DLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDT 295
DLI+L L+TH HF+ILRE +T K + G
Sbjct: 212 DLIILGLSTHAPHFAILREEVTFT----KTLKNKKTG----------------------- 244
Query: 296 PIHKKKYQFLNIWVLREYLQYEL-DIPNP-PFPINFERIVDDFVFLCFFVGNDFLPHMPT 353
+ +++ FL + +LREYL+ E DI N + +FERI+DDF+ + F +GNDFLP++P
Sbjct: 245 -LELQRFYFLQLSLLREYLELEFKDIANKLKYKYDFERILDDFILILFVIGNDFLPNLPD 303
Query: 354 LEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKR 408
L + +GA +++ ++ + GY+ + G + L R+ +I ++ +E F+++
Sbjct: 304 LHLNKGAFPVILETFKLSLLSSEGYINENGTIDLKRLSTWIDYLSKFELMNFKQK 358
Score = 125 bits (314), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 79/213 (37%), Positives = 110/213 (51%), Gaps = 10/213 (4%)
Query: 419 EAMK--LNARRESSEELLQAPVAVADTVKLGE------PGYKERYYADKFEISNPEEIDK 470
E MK L ++S +E P + KL E K YY K I +E +K
Sbjct: 474 EEMKNVLKKHKDSYKEFHSTPDKLPKLDKLDEFNNESFTKMKSSYYLRKLSIDITDE-EK 532
Query: 471 VKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDLEITFFLGEPFRP 530
V D+ YVEGL WV YYY+ SW WFY YHYAP SD+ + +I F +PF P
Sbjct: 533 VT-DLAKNYVEGLQWVMYYYYRGCASWGWFYRYHYAPRISDIYLGLNQKIQFEKDDPFTP 591
Query: 531 FDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFID 590
F QLM LP S +P +R LM + SPI FYP + ++D NGK W+ VV + F+D
Sbjct: 592 FQQLMAVLPERSKELIPTIFRPLMYNQDSPILDFYPSEVKLDRNGKSADWEAVVLISFVD 651
Query: 591 EKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVH 623
++ L+ + L L ++ RN D+L+++
Sbjct: 652 QERLVAAMEPLLKDLEPKDARRNKFGTDILFLY 684
>gi|358371673|dbj|GAA88280.1| exonuclease Kem1 [Aspergillus kawachii IFO 4308]
Length = 1405
Score = 301 bits (772), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 182/481 (37%), Positives = 264/481 (54%), Gaps = 82/481 (17%)
Query: 1 MGVPAFYRWLADRYP-LSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGI 59
MGVP F+RWL++RYP +S++ P EFDNLYLDMNGI
Sbjct: 1 MGVPKFFRWLSERYPAISMLIAENRIP---------------------EFDNLYLDMNGI 39
Query: 60 IHPCFHPDGKPAPT---SYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQR 116
IH C H D +PT + D +F +IF+YI+H++ ++P+KL ++A+DGVAPRAKMNQQR
Sbjct: 40 IHNCTHKDSD-SPTFRMTEDKMFIAIFNYIEHLYGKIKPKKLFFMAVDGVAPRAKMNQQR 98
Query: 117 TRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQ 176
RRFR A DA A KE A + KE E DSN ITPGT+FMA L+ L+
Sbjct: 99 ARRFRTALDAETA--------KEKAIAQGIEMPKE--EAFDSNCITPGTEFMAKLTEQLK 148
Query: 177 YFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDAD 236
YFI ++++ WQ +++LS VPGEGEHKIM YIR + P +DPN RHCLYGLDAD
Sbjct: 149 YFINKKISEDKDWQGVEIVLSGHEVPGEGEHKIMEYIRHAKAQPLYDPNVRHCLYGLDAD 208
Query: 237 LIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTP 296
LIML L +H+ HFS+LRE +T Q +K
Sbjct: 209 LIMLGLLSHDPHFSLLREEVTFGRQVQK----------------------------KSKE 240
Query: 297 IHKKKYQFLNIWVLREYLQYELDIPNP----PFPINFERIVDDFVFLCFFVGNDFLPHMP 352
+ + + L++ ++REYL+ E FP + E+++DDF+ + FFVGNDFLP++P
Sbjct: 241 LEHQNFFLLHLCMVREYLELEFQELEQEGVLSFPFDMEKVIDDFILMAFFVGNDFLPNLP 300
Query: 353 TLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQ 412
L I EGA+ + +Y+ MGGY+ + G + +DR+ + +++ E + F+
Sbjct: 301 NLHINEGALAFMFKIYKESLPKMGGYINEQGVIKMDRLGILLDALSDVEFRFFE------ 354
Query: 413 QAYEYNEAMKLNARRESSEELLQAPVAVADTVKLGEPGYKERY-YADKFEISNPEEIDKV 471
+EY++A + A++ E + P T P KE + K+ ++ P + +
Sbjct: 355 --HEYSDAQWIRAKKGDVTEPQEKPKGFTIT-----PAQKELFKQVKKYVLNRPGKAAET 407
Query: 472 K 472
K
Sbjct: 408 K 408
Score = 165 bits (418), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 80/175 (45%), Positives = 108/175 (61%), Gaps = 6/175 (3%)
Query: 451 YKERYYADKFE--ISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPF 508
+K YY KF + + EE+ +++ YV+GL WV YYY+ + SW WF+ YHYAP
Sbjct: 505 WKNNYYVGKFGWGLDSHEEM----RELTENYVQGLQWVLYYYYRGIASWPWFFKYHYAPM 560
Query: 509 ASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPD 568
SD+K + + F LG+PFRP++QLMG LP S +P YR+LMT P SPI FYP D
Sbjct: 561 ISDVKKGLNADTNFRLGKPFRPYEQLMGVLPDRSKKTVPAAYRDLMTSPDSPIIDFYPRD 620
Query: 569 FQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVH 623
F++DMNGK+ W+ VVK+PFI+E+ LL E LT EE RN L + +
Sbjct: 621 FELDMNGKKMEWEAVVKIPFIEERRLLDALATREHLLTPEEKARNGFGASLKFTY 675
>gi|346974250|gb|EGY17702.1| 5'-3' exoribonuclease [Verticillium dahliae VdLs.17]
Length = 1404
Score = 301 bits (772), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 175/437 (40%), Positives = 242/437 (55%), Gaps = 72/437 (16%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP F+RWL++RYP +I V+ E+ EFD LYLDMNGII
Sbjct: 1 MGVPKFFRWLSERYP-AISQVIAEN-------------------RIPEFDALYLDMNGII 40
Query: 61 HPCFHPDGKPAPT---SYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRT 117
H C H D T S +++F IF+YI+H+F ++P+KL Y+AIDGVAPRAKMNQQR+
Sbjct: 41 HNCTHKDAGEDATFRLSEEEMFIRIFNYIEHLFGKIKPKKLFYMAIDGVAPRAKMNQQRS 100
Query: 118 RRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQY 177
RRFR A DA A E+ ++ E KE P DSN ITPGT+FMA LS L+Y
Sbjct: 101 RRFRTALDAENAR--EKAIKDGVE------MPKEAP--FDSNCITPGTEFMAKLSRQLKY 150
Query: 178 FIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADL 237
F+ ++ + WQ +++LS VPGEGEHKIM YIR + P +D N RHCLYGLDADL
Sbjct: 151 FVNKKVTEDADWQECEIVLSGHEVPGEGEHKIMEYIRNAKAQPDYDTNVRHCLYGLDADL 210
Query: 238 IMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPI 297
IML L +H+ HF +LRE +T G+ K +
Sbjct: 211 IMLGLLSHDPHFCLLREEVTF-GRASKT---------------------------KSKEL 242
Query: 298 HKKKYQFLNIWVLREYLQYELD------IPNPPFPINFERIVDDFVFLCFFVGNDFLPHM 351
+ + L++ ++REYL E I N FP + ER++DDF+ + FF+GNDFLPH+
Sbjct: 243 EHQNFYLLHLCIVREYLDLEFQELKQDGILN--FPYDLERVIDDFILMGFFIGNDFLPHL 300
Query: 352 PTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRT-- 409
P L I EGA+ + +Y+ GY+ + G + L R+++ + +A E F+
Sbjct: 301 PRLHINEGALASMFRIYKSILPECDGYINEGGVINLQRLQRLLTELAKDETDQFEHDVSD 360
Query: 410 -RIQQAYEYNEAMKLNA 425
R Q+ + +E + NA
Sbjct: 361 ERWFQSKQISEQQQKNA 377
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 84/183 (45%), Positives = 114/183 (62%)
Query: 441 ADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWF 500
AD K G+K +YY KFE +P+ DK + YV+GL WV YYY+ + SW WF
Sbjct: 496 ADLYKQKYQGWKTKYYLQKFEDWSPDNYDKELTALCENYVQGLQWVLYYYYRGIASWPWF 555
Query: 501 YPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSP 560
Y YHY+P SD+ ++ F LG+PFRP++QLMG LP S S +P Y +LMT+P SP
Sbjct: 556 YAYHYSPLTSDVIKGLGADLNFKLGQPFRPYEQLMGVLPDRSKSIVPTVYWDLMTNPKSP 615
Query: 561 IYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLL 620
I FYP DF++DMNGK+ W+ VVK+PFIDEK LL + L+++E RN + L
Sbjct: 616 IVDFYPRDFELDMNGKKMEWEAVVKIPFIDEKRLLDAMGPVNEKLSDDEKSRNQFGVSLK 675
Query: 621 YVH 623
+ +
Sbjct: 676 FTY 678
>gi|50549393|ref|XP_502167.1| YALI0C23144p [Yarrowia lipolytica]
gi|49648034|emb|CAG82487.1| YALI0C23144p [Yarrowia lipolytica CLIB122]
Length = 1526
Score = 301 bits (771), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 168/412 (40%), Positives = 243/412 (58%), Gaps = 63/412 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MG+P F+R++++R+PL V+ D Q+ E+DNLYLDMN I+
Sbjct: 1 MGIPKFFRYISERWPLISQQVI--DTQIP------------------EYDNLYLDMNSIL 40
Query: 61 HPCFHPDGKPA-PTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRR 119
H C H D + + +F++IF+YI+H+F +RP+KL ++AIDGVAPRAKMNQQR+RR
Sbjct: 41 HVCTHKDADVTFQLTEEQMFRAIFEYIEHLFSKIRPKKLFFMAIDGVAPRAKMNQQRSRR 100
Query: 120 FRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFI 179
FR A DA +A+A K EE G +L K + DSN ITPGT+FM L+ L YF+
Sbjct: 101 FRTALDAEKAKA------KALEE-GTIL----KEDQFDSNAITPGTEFMEKLTTQLNYFV 149
Query: 180 QARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIM 239
++++ WQ ++LS VPGEGEHKI IR+ + P +DPNTRHC+YGLDADLIM
Sbjct: 150 HKKVSEDADWQNIDIVLSGHEVPGEGEHKINECIRINKAQPDYDPNTRHCVYGLDADLIM 209
Query: 240 LSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIHK 299
L L +H+ HFS+LRE E F + G A E +
Sbjct: 210 LGLGSHDPHFSLLRE--------EVVFGPRRAGPKALE---------------------E 240
Query: 300 KKYQFLNIWVLREYLQYEL-DIPNP-PFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIR 357
+ + L+I +LREYL+ E D+ + FP +FERI+DD++ L FFVGNDFLP++P + I
Sbjct: 241 QNFYLLHISLLREYLELEFQDLADEISFPYDFERILDDYILLFFFVGNDFLPNLPQIHIN 300
Query: 358 EGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRT 409
E + L + +Y++ GY+ D G + L R++ F+ + +E IF+++
Sbjct: 301 EDSHALFVELYKKVMKISDGYINDRGNINLQRLDLFLAEMEKFEIGIFEEQA 352
Score = 159 bits (402), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 85/194 (43%), Positives = 109/194 (56%), Gaps = 8/194 (4%)
Query: 436 APVAVADTVKLGEPGY-------KERYYADKFEISNPEEIDKVK-KDVVLKYVEGLCWVC 487
APV A+ + E Y K+ YY KF S + K + K + YVEGL W+
Sbjct: 482 APVKTAEALAQREEIYNQKFEEWKDDYYKKKFGWSTTTDEGKAELKALTENYVEGLQWIL 541
Query: 488 RYYYQDVCSWQWFYPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALP 547
YYY V SW W+Y YHYAP SD++ + F G+PF+PF QLMG LP S LP
Sbjct: 542 HYYYDGVPSWSWYYGYHYAPRVSDVRKGLQANLKFKAGQPFKPFQQLMGVLPERSKKLLP 601
Query: 548 EKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTE 607
+ Y LM D +SPIY FYP DF++D NGK+ W+ VVK+PF+DE LL E LT
Sbjct: 602 QAYWPLMADSNSPIYDFYPNDFELDKNGKKADWEAVVKIPFVDESRLLTAMATKETGLTA 661
Query: 608 EELFRNSVMLDLLY 621
E RN+ +LL+
Sbjct: 662 GENKRNAFGNNLLF 675
>gi|341892378|gb|EGT48313.1| CBN-XRN-1 protein [Caenorhabditis brenneri]
Length = 1684
Score = 301 bits (771), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 168/417 (40%), Positives = 245/417 (58%), Gaps = 54/417 (12%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP FYRW ++RYP + +V+ E Q+ EFDNLYLDMNGII
Sbjct: 1 MGVPKFYRWTSERYPC-LSEVINES-QIP------------------EFDNLYLDMNGII 40
Query: 61 HPCFHPDGKPAP--TSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C HP+ + +++F +IF YI++++ L+RP+K+ ++A+DGVAPRAKMNQQR R
Sbjct: 41 HNCSHPNDDDVTFRITEEEIFVNIFAYIENLYNLIRPQKVFFMAVDGVAPRAKMNQQRAR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RF +A+ A + +L K E+ G+++ +++ DSN ITPGT FM L L +
Sbjct: 101 RFMSARTA------QTQLDKAIEK-GEVIPTEKR---FDSNCITPGTYFMTRLHDQLDEW 150
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
I+ + WQ K+ILS NVPGEGEHKIM YIR +R +DPNTRHC+YGLDADLI
Sbjct: 151 IKKKSESDSHWQGRKIILSGHNVPGEGEHKIMDYIRTERAKSDYDPNTRHCMYGLDADLI 210
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
ML + +HE HFS+LRE +T + K + + KP +D
Sbjct: 211 MLGIVSHEPHFSLLREEVTFNTRPRK----------NEQKNKKPKRTDSD---------- 250
Query: 299 KKKYQFLNIWVLREYLQYEL-DIPNP-PFPINFERIVDDFVFLCFFVGNDFLPHMPTLEI 356
K + L++ +LREYL +E D+ PF + ER+VDD++ + VGNDFLPH+P++ I
Sbjct: 251 VKTFHLLHLSLLREYLAWEFADVKESLPFAYDMERVVDDWIMMGLLVGNDFLPHLPSIHI 310
Query: 357 REGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQ 413
+ A+ LL Y++ + GY+ ++G + L R EKF+ +A+ + F + +Q
Sbjct: 311 HDDALPLLYSTYKKVLPTLDGYINESGYLNLARFEKFLAQLALNDKNSFMDKLEDEQ 367
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 75/167 (44%), Positives = 99/167 (59%), Gaps = 6/167 (3%)
Query: 451 YKERYYADKFEISNPEEIDKVK-KDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFA 509
+K+ YYADK N I K + + YV + W YYY SW WFYP+HYAPF
Sbjct: 495 HKKSYYADKLRYKN---ISKSELRAQAEGYVRAIQWNLHYYYHGCVSWSWFYPHHYAPFI 551
Query: 510 SDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLM-TDPS-SPIYKFYPP 567
SD++ +D++I F L +PF PF+QL+ LP AS+ LP + LM +DP+ S IY FYP
Sbjct: 552 SDVQGFADMKIEFELSKPFHPFEQLLAVLPEASADCLPRPLQELMSSDPAKSVIYDFYPS 611
Query: 568 DFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNS 614
F+ D+NGKR W+ VV +PFI E LL + LT EE RN+
Sbjct: 612 KFETDLNGKRNDWEAVVLIPFIAENRLLEAIESKRSRLTNEENMRNT 658
>gi|346325316|gb|EGX94913.1| exonuclease Kem1, putative [Cordyceps militaris CM01]
Length = 1394
Score = 301 bits (771), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 170/413 (41%), Positives = 234/413 (56%), Gaps = 65/413 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP F+RWL++RYP I ++ E+ EFD LYLDMNGII
Sbjct: 1 MGVPKFFRWLSERYP-PISQLIAEN-------------------RIPEFDCLYLDMNGII 40
Query: 61 HPCFHPDGKPAPT---SYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRT 117
H C H D T S +++F IF+YI+H+F ++PR+L ++AIDGVAPRAKMNQQR
Sbjct: 41 HNCTHKDAGEDTTFRLSEEEMFIRIFNYIEHLFGKIKPRQLFFMAIDGVAPRAKMNQQRA 100
Query: 118 RRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQY 177
RRFR A E E E+ KE E KE+P DSN ITPGT FMA LS LQY
Sbjct: 101 RRFRTA---LEVEMAREKAIKEGVEM-----PKEEP--FDSNCITPGTAFMAKLSRQLQY 150
Query: 178 FIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADL 237
F+ ++++ WQ +++LS VPGEGEHKIM YIR ++ PG++PN RHCLYGLDADL
Sbjct: 151 FVNKKVSEDTDWQGCEIVLSGHEVPGEGEHKIMEYIRNAKSQPGYNPNVRHCLYGLDADL 210
Query: 238 IMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPI 297
IML L +H+ HFS+LRE +T G+ N + +
Sbjct: 211 IMLGLLSHDPHFSLLREEVTF---------------------GRASKNKSK-------EL 242
Query: 298 HKKKYQFLNIWVLREYLQYEL----DIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPT 353
+ + L++ ++REYL+ E + + ER++DDF+ + FFVGNDFLP++P
Sbjct: 243 EHQNFFLLHLCMVREYLEMEFQELKQTQDSGLEFDLERVIDDFILMAFFVGNDFLPNLPG 302
Query: 354 LEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQ 406
L I EGA+ + +Y+R GGYL + G + + R + I + E + F+
Sbjct: 303 LHINEGALADMFEIYKRILPEEGGYLHENGVLNIKRALRMIAELGKVEIKQFE 355
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 78/174 (44%), Positives = 107/174 (61%)
Query: 450 GYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFA 509
G+K +YY KF + + YVEGL WV YYY+ + SW WFY YHYAP
Sbjct: 512 GWKTKYYLQKFPEWESTAYADEQTALCENYVEGLQWVLFYYYRGIASWPWFYKYHYAPLI 571
Query: 510 SDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDF 569
SD+ ++ ++ F G+PF+P++QLMG LP S +P Y +LMT P+SPI FYP DF
Sbjct: 572 SDVAKGANAKLLFEKGQPFKPYEQLMGVLPDRSKKIVPTAYHDLMTSPASPIIDFYPRDF 631
Query: 570 QIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVH 623
++DMNGK+ W+ VVK+PFIDEK LL + V L++EE RN + L + +
Sbjct: 632 ELDMNGKKMDWEAVVKIPFIDEKRLLAAMETKNVLLSDEEKARNGFGVPLQFTY 685
>gi|242792196|ref|XP_002481904.1| exonuclease Kem1, putative [Talaromyces stipitatus ATCC 10500]
gi|218718492|gb|EED17912.1| exonuclease Kem1, putative [Talaromyces stipitatus ATCC 10500]
Length = 1417
Score = 301 bits (770), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 164/397 (41%), Positives = 229/397 (57%), Gaps = 66/397 (16%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP F+RWL++RYP SI ++ E+ EFDNLY DMNGII
Sbjct: 1 MGVPKFFRWLSERYP-SISQLIAEN-------------------RIPEFDNLYFDMNGII 40
Query: 61 HPCFHPDGKPAPT---SYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRT 117
H C H D +PT S D +F +IF+YI+H++ ++P+KL ++A+DGVAPRAKMNQQR
Sbjct: 41 HNCTHSDSD-SPTHRMSEDQMFIAIFNYIEHLYGKIKPKKLFFMAVDGVAPRAKMNQQRA 99
Query: 118 RRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQY 177
RRFR+A DA A+ E+ + + E K + DSN ITPGT+FMA L+ L+Y
Sbjct: 100 RRFRSALDAEVAK--EKAIAQGIE--------MPKEDAFDSNCITPGTEFMARLTKQLKY 149
Query: 178 FIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADL 237
FI ++++ WQ ++LS VPGEGEHKIM YIR + P +DPN RHCLYGLDADL
Sbjct: 150 FISKKISEDVDWQGVDIVLSGHEVPGEGEHKIMEYIRQAKAQPDYDPNVRHCLYGLDADL 209
Query: 238 IMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPI 297
IML L +H+ +F +LRE +T Q +K +
Sbjct: 210 IMLGLLSHDPYFCLLREEVTFGRQAQK----------------------------KSKEL 241
Query: 298 HKKKYQFLNIWVLREYLQYELD----IPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPT 353
+ + L++ ++REYL+ E I + + ERI+DDF+ + FFVGNDFLP++P
Sbjct: 242 EHQNFYLLHLCIVREYLELEFQELKAIKDSSIDFDMERIIDDFILMAFFVGNDFLPNLPH 301
Query: 354 LEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRV 390
+ I EGA+ L+ Y+ MGGY+ + G + L R+
Sbjct: 302 MHINEGALALMFTKYKEALPKMGGYINEYGTINLQRL 338
Score = 165 bits (417), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 83/173 (47%), Positives = 104/173 (60%), Gaps = 2/173 (1%)
Query: 451 YKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFAS 510
+K +YY +KF +E K + YV+GL WV YYY+ V SW W++ YHYAP S
Sbjct: 516 WKNKYYMEKFGHGLEDEAAMTK--LTENYVQGLQWVLFYYYRGVVSWPWYFQYHYAPMIS 573
Query: 511 DLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQ 570
D+K I F LG+PFRPF QLMG LP S +P Y +LMT P SPI FYP DF+
Sbjct: 574 DVKKGLGANIDFKLGQPFRPFQQLMGVLPDRSKKIVPPAYWDLMTSPDSPIIDFYPRDFE 633
Query: 571 IDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVH 623
+DMNGK+ W+ VVK+PFIDEK LL E LT EE RN + L + +
Sbjct: 634 LDMNGKKMEWEAVVKIPFIDEKRLLPAMASREHLLTPEERGRNEFGVTLKFTY 686
>gi|302416751|ref|XP_003006207.1| 5'-3' exoribonuclease [Verticillium albo-atrum VaMs.102]
gi|261355623|gb|EEY18051.1| 5'-3' exoribonuclease [Verticillium albo-atrum VaMs.102]
Length = 1383
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 170/412 (41%), Positives = 231/412 (56%), Gaps = 69/412 (16%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP F+RWL++RYP +I V+ E+ EFD LYLDMNGII
Sbjct: 1 MGVPKFFRWLSERYP-AISQVIAEN-------------------RIPEFDALYLDMNGII 40
Query: 61 HPCFHPDGKPAPT---SYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRT 117
H C H D T S +++F IF+YI+H+F ++P+KL Y+AIDGVAPRAKMNQQR+
Sbjct: 41 HNCTHKDAGEDATFRLSEEEMFIRIFNYIEHLFGKIKPKKLFYMAIDGVAPRAKMNQQRS 100
Query: 118 RRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQY 177
RRFR A DA A E+ ++ E KE P DSN ITPGT+FMA LS L+Y
Sbjct: 101 RRFRTALDAENAR--EKAIKDGVE------MPKEAP--FDSNCITPGTEFMAKLSRQLKY 150
Query: 178 FIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADL 237
F+ ++ + WQ +++LS VPGEGEHKIM YIR + P +D N RHCLYGLDADL
Sbjct: 151 FVNKKVTEDADWQECEIVLSGHEVPGEGEHKIMEYIRNAKAQPDYDTNVRHCLYGLDADL 210
Query: 238 IMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPI 297
IML L +H+ HF +LRE +T G+ K +
Sbjct: 211 IMLGLLSHDPHFCLLREEVTF-GRASKT---------------------------KSKEL 242
Query: 298 HKKKYQFLNIWVLREYLQYELD------IPNPPFPINFERIVDDFVFLCFFVGNDFLPHM 351
+ + L++ ++REYL E I N FP + ER++DDF+ + FF+GNDFLPH+
Sbjct: 243 EHQNFYLLHLCIVREYLDLEFQELKQDGILN--FPYDLERVIDDFILMGFFIGNDFLPHL 300
Query: 352 PTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQ 403
P L I EGA+ + +Y+ GY+ + G + L R++ + A+ E Q
Sbjct: 301 PRLHINEGALAYMFRIYKSILPECDGYINEGGVINLQRLQPMVPIEAISEQQ 352
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 84/183 (45%), Positives = 113/183 (61%)
Query: 441 ADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWF 500
AD K G+K +YY KFE P+ DK + YV+GL WV YYY+ + SW WF
Sbjct: 475 ADLYKQKYQGWKTKYYLQKFEDWAPDNYDKELTALCENYVQGLQWVLYYYYRGIASWPWF 534
Query: 501 YPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSP 560
Y YHY+P SD+ ++ F LG+PFRP++QLMG LP S S +P Y +LMT+P SP
Sbjct: 535 YAYHYSPLTSDVIKGLGADLNFKLGQPFRPYEQLMGVLPDRSKSIVPTVYWDLMTNPKSP 594
Query: 561 IYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLL 620
I FYP DF++DMNGK+ W+ VVK+PFIDEK LL + L+++E RN + L
Sbjct: 595 IIDFYPRDFELDMNGKKMEWEAVVKIPFIDEKRLLDAMGPVNEELSDDEKSRNQFGVSLK 654
Query: 621 YVH 623
+ +
Sbjct: 655 FTY 657
>gi|29126940|gb|AAH48104.1| XRN1 protein [Homo sapiens]
Length = 459
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 167/411 (40%), Positives = 240/411 (58%), Gaps = 62/411 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP FYRW+++RYP + +VV+E Q+ EFDNLYLDMNGII
Sbjct: 1 MGVPKFYRWISERYP-CLSEVVKEH-QIP------------------EFDNLYLDMNGII 40
Query: 61 HPCFHP--DGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C HP D S D +F IF Y++ +F +++PRK+ ++A+DGVAPRAKMNQQR R
Sbjct: 41 HQCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RFR+AK+A E++++K E+ G+ L + + DSN ITPGT+FMA L L+YF
Sbjct: 101 RFRSAKEA------EDKIKKAIEK-GETLPTEAR---FDSNCITPGTEFMAKLHEHLKYF 150
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
+ +++ WQ + S PGEGEHKIM +IR ++ P DPNTRHCLYGLDADLI
Sbjct: 151 VNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLI 210
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
ML L +HE HFS+LRE + G++ + VC ++T H
Sbjct: 211 MLGLTSHEAHFSLLREEVRFGGKKTQR-VCAP----------------------EETTFH 247
Query: 299 KKKYQFLNIWVLREYLQYELDI--PNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEI 356
L++ ++REY+ YE + F + ERI+DD++ + F VGNDF+PH+P L I
Sbjct: 248 -----LLHLSLMREYIDYEFSVLKEKITFKYDIERIIDDWILMGFLVGNDFIPHLPHLHI 302
Query: 357 REGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQK 407
A+ LL Y +GGY+ ++G + L R EK++ ++ ++ + F +
Sbjct: 303 NHDALPLLYGTYVTILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSE 353
>gi|71052193|gb|AAH39314.1| XRN1 protein [Homo sapiens]
Length = 459
Score = 300 bits (768), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 167/411 (40%), Positives = 240/411 (58%), Gaps = 62/411 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP FYRW+++RYP + +VV+E Q+ EFDNLYLDMNGII
Sbjct: 1 MGVPKFYRWISERYP-CLSEVVKEH-QIP------------------EFDNLYLDMNGII 40
Query: 61 HPCFHP--DGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C HP D S D +F IF Y++ +F +++PRK+ ++A+DGVAPRAKMNQQR R
Sbjct: 41 HQCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RFR+AK+A E++++K E+ G+ L + + DSN ITPGT+FMA L L+YF
Sbjct: 101 RFRSAKEA------EDKIKKAIEK-GETLPTEAR---FDSNCITPGTEFMARLHEHLKYF 150
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
+ +++ WQ + S PGEGEHKIM +IR ++ P DPNTRHCLYGLDADLI
Sbjct: 151 VNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLI 210
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
ML L +HE HFS+LRE + G++ + VC ++T H
Sbjct: 211 MLGLTSHEAHFSLLREEVRFGGKKTQR-VCAP----------------------EETTFH 247
Query: 299 KKKYQFLNIWVLREYLQYELDI--PNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEI 356
L++ ++REY+ YE + F + ERI+DD++ + F VGNDF+PH+P L I
Sbjct: 248 -----LLHLSLMREYIDYEFSVLKEKITFKYDIERIIDDWILMGFLVGNDFIPHLPHLHI 302
Query: 357 REGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQK 407
A+ LL Y +GGY+ ++G + L R EK++ ++ ++ + F +
Sbjct: 303 NHDALPLLYGTYVTILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSE 353
>gi|350289466|gb|EGZ70691.1| hypothetical protein NEUTE2DRAFT_92294 [Neurospora tetrasperma FGSC
2509]
Length = 531
Score = 300 bits (768), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 142/261 (54%), Positives = 184/261 (70%), Gaps = 5/261 (1%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MG+PA +RWL+ +YP I V+E+ P +G PVD +KPNPNG EFDNLYLDMNGI+
Sbjct: 1 MGIPAAFRWLSTKYPKIISPVIEDQPITMPDGTVIPVDATKPNPNGEEFDNLYLDMNGIV 60
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ +PAP +++ +F Y D + +VRPRKLL +A+DGVAPRAKMNQQR+RRF
Sbjct: 61 HPCSHPEDRPAPKDEEEMMVEVFKYTDRVVNMVRPRKLLMIAVDGVAPRAKMNQQRSRRF 120
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETC-----DSNVITPGTQFMAVLSAAL 175
RAA++A E E ++++ + ++ +E E DSN ITPGT FM +L+A+L
Sbjct: 121 RAAREAMEKEEDKQKFVELLKKQNGKPQEEEPVEIVVKKAFDSNSITPGTPFMDILAASL 180
Query: 176 QYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDA 235
+Y+ +LN P W KVI+SDA VPGEGEHKIM ++R QR P DPNTRH +YGLDA
Sbjct: 181 RYWCSYKLNTDPAWANIKVIISDATVPGEGEHKIMEFVRSQRGSPNHDPNTRHVIYGLDA 240
Query: 236 DLIMLSLATHEIHFSILREVI 256
DLIML LATHE HF +LRE +
Sbjct: 241 DLIMLGLATHEPHFRVLREDV 261
>gi|444322153|ref|XP_004181732.1| hypothetical protein TBLA_0G02750 [Tetrapisispora blattae CBS 6284]
gi|387514777|emb|CCH62213.1| hypothetical protein TBLA_0G02750 [Tetrapisispora blattae CBS 6284]
Length = 1546
Score = 300 bits (767), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 160/414 (38%), Positives = 244/414 (58%), Gaps = 65/414 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MG+P F+R++++R+P+ I+ ++E G P EFDNLYLDMN I+
Sbjct: 1 MGIPKFFRYISERWPM-ILQLIE--------GNQIP-----------EFDNLYLDMNSIL 40
Query: 61 HPCFHPDGKPAPT----SYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQR 116
H C H + + S ++VF IF YIDH+F+ ++P++ Y+AIDGVAPRAKMNQQR
Sbjct: 41 HTCTHSNDDSSDITKRLSEEEVFAKIFTYIDHLFMTIKPKQTFYMAIDGVAPRAKMNQQR 100
Query: 117 TRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQ 176
RRFR A DA +A L+K EE ++ K E DSN ITPGT+FMA L+ L+
Sbjct: 101 ARRFRTAMDAEKA------LQKAIEEGTEI----PKGEPFDSNSITPGTEFMAKLTKNLK 150
Query: 177 YFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDAD 236
YFI +++ W+ +++ S VPGEGEHKIM YIR R+ G++PNTRHC+YGLDAD
Sbjct: 151 YFIHDKISNDSNWRNVEIVFSGHEVPGEGEHKIMDYIRTIRSQEGYNPNTRHCIYGLDAD 210
Query: 237 LIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTP 296
LI+L L+TH HF++LRE + G+ + G PA
Sbjct: 211 LIILGLSTHAPHFALLREEVKF-GR-------------------RSGQTPA--------- 241
Query: 297 IHKKKYQFLNIWVLREYLQYELD--IPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTL 354
+ + + L++ +LREYL+ E + F NFER++DDF+ + F +GNDFLP++P L
Sbjct: 242 LENQNFFLLHLSLLREYLELEFENIADELQFEYNFERVLDDFILILFVIGNDFLPNLPDL 301
Query: 355 EIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKR 408
+ +GA +L+ ++ + GY+ + G++ L R++ +++ + +E F+++
Sbjct: 302 HLNKGAFPVLLQTFKEALLHLDGYINEFGKINLQRLKIWLEYLTQFELMNFEQK 355
Score = 125 bits (315), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 73/177 (41%), Positives = 97/177 (54%), Gaps = 2/177 (1%)
Query: 451 YKERYYADKFE-ISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFA 509
+K YY DK + +N +E + K + YVEGL WV YYY+ SW W+YP+HY+P
Sbjct: 541 WKNEYYKDKLQFTTNTDEGKQQLKKLSCDYVEGLQWVLFYYYKGCQSWSWYYPHHYSPRI 600
Query: 510 SDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDF 569
SDL I F PF PF QLM LP S + +P R LM + +S I FYP +
Sbjct: 601 SDLILGLHQVIDFEKSVPFTPFQQLMAVLPERSKNLIPVCLRPLMYEENSKIIDFYPHEV 660
Query: 570 QIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYV-HPQ 625
++D NGK W+ VV L FIDEK L+ + L+ EE RNS +L + +PQ
Sbjct: 661 KLDKNGKTAEWEAVVLLSFIDEKRLIDAMEPYLSKLSPEEKIRNSFGRNLTFTFNPQ 717
>gi|403368617|gb|EJY84145.1| 5'-3' exoribonuclease 2 [Oxytricha trifallax]
Length = 1735
Score = 299 bits (766), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 173/419 (41%), Positives = 240/419 (57%), Gaps = 67/419 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MG+P F++WL RYP ++D+ E+ P+D NLYLD+NGI+
Sbjct: 1 MGIPKFFKWLTRRYPQVLLDIKREEQ-------VPPID------------NLYLDLNGIV 41
Query: 61 HPCFH-PDGK-----PAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQ 114
H C H D K ++++V+ +I ID + ++P+KLL+LA+DGVAPRAKMNQ
Sbjct: 42 HNCIHGNDAKLHERVSQLENFEEVWINIMKAIDELVHTIKPKKLLFLAVDGVAPRAKMNQ 101
Query: 115 QRTRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAA 174
QR RRFR AKD+ + L+ +F++ GK E P DSN I+PGT+FM LS
Sbjct: 102 QRARRFRTAKDS-------QLLKDKFQKEGK-----EAPTLFDSNAISPGTKFMEELSKQ 149
Query: 175 LQYFIQARLNQIPGWQ-FTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGL 233
L +F+Q + N P +Q KVILSDA VPGEGEHK+M +IR ++ +DPNTRHC YG
Sbjct: 150 LDFFVQYKQNTDPVYQNLEKVILSDAFVPGEGEHKMMDFIRQAKHDENYDPNTRHCFYGA 209
Query: 234 DADLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVD 293
DADLIMLSL THE +F ILRE H+ + K G GV
Sbjct: 210 DADLIMLSLLTHEPNFIILRE-----------------EHVVRKI--KQG-------GVQ 243
Query: 294 DTPIHK-KKYQFLNIWVLREY--LQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPH 350
+ + YQ + I +LREY L+Y P + ERI+DDFVF CFF+GNDFLP
Sbjct: 244 RLDLKRTNNYQVMFINLLREYFLLEYRAVAPQMKMKFDLERIIDDFVFFCFFIGNDFLPS 303
Query: 351 MPTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRT 409
+ L+I EG+++ ++ +Y+R +M Y+T+ G + DR E FI+ + +E F+ R
Sbjct: 304 LSALDIGEGSLDSIIDLYKRLLPSMENYITEEGRIYWDRAEPFIKMLGEHEHDSFKNRV 362
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 65/189 (34%), Positives = 99/189 (52%), Gaps = 21/189 (11%)
Query: 459 KFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKD---- 514
KF+++ E +KK +++KY+EGL WV YYY+ W+W+YPYHYAP SDL +
Sbjct: 577 KFDVTTIEG-RSLKKKMLMKYLEGLQWVLYYYYRGAQHWRWYYPYHYAPMISDLDENIVN 635
Query: 515 --------LSDLEITFF---LGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYK 563
+ + EI + EP+ PF QL+ LPA S LP +Y ++ + +
Sbjct: 636 NFLGGKRYIDEFEIDHNCADINEPYTPFQQLLSILPAKSLHLLPSQYAKIVL---GELRQ 692
Query: 564 FYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKL--EVFLTEEELFRNSVMLDLLY 621
++P +F ID+NG+ A++ +PF DEKL + Q L + L + + RN V D
Sbjct: 693 YFPDEFDIDLNGRTLAYEAACLIPFCDEKLFIGQETSLLRDNPLNDHDDSRNIVAFDYKV 752
Query: 622 VHPQHPLYQ 630
H L Q
Sbjct: 753 YTYDHLLRQ 761
>gi|429857774|gb|ELA32622.1| exonuclease kem1 [Colletotrichum gloeosporioides Nara gc5]
Length = 1398
Score = 299 bits (766), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 167/432 (38%), Positives = 243/432 (56%), Gaps = 65/432 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP F+RWL++RYP +I ++ E+ EFD LYLDMNGII
Sbjct: 1 MGVPKFFRWLSERYP-AISQLIAEN-------------------RIPEFDCLYLDMNGII 40
Query: 61 HPCFHPDGKPAPT---SYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRT 117
H C H D T S +++F IF+YI+H+F ++P++L ++AIDGVAPRAKMNQQR
Sbjct: 41 HNCTHKDTGEDTTFRLSEEEMFIRIFNYIEHLFGKIKPKQLFFMAIDGVAPRAKMNQQRA 100
Query: 118 RRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQY 177
RRFR A DA +A K E ++ KE P DSN ITPGT+FMA L+ L+Y
Sbjct: 101 RRFRTALDAEKAR------DKAISEGVEM--PKEPP--FDSNCITPGTEFMAKLTQQLKY 150
Query: 178 FIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADL 237
F+ ++++ WQ +++LS VPGEGEHKIM YIR + P +DPN RHCLYGLDADL
Sbjct: 151 FVNKKVSEDADWQGCEIVLSGHEVPGEGEHKIMEYIRNAKAQPEYDPNVRHCLYGLDADL 210
Query: 238 IMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPI 297
IML L +H+ HF +LRE +T G+ N A +
Sbjct: 211 IMLGLLSHDPHFCLLREEVTF---------------------GRHNKNKA-------REL 242
Query: 298 HKKKYQFLNIWVLREYLQYELDIPNPP----FPINFERIVDDFVFLCFFVGNDFLPHMPT 353
+ + +++ ++REYL+ E P FP + ER++DDF+ + FFVGNDFLP++P
Sbjct: 243 EHQNFYLMHLCIVREYLELEFQELQEPGKLGFPFDLERVIDDFILMAFFVGNDFLPNLPR 302
Query: 354 LEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQ 413
L I EGA+ + +Y+ GY+ + G + L R++K ++ + E + F+ ++
Sbjct: 303 LHINEGALAAMFRIYKDILPKGDGYINEGGIINLPRLQKLLEELGKDEIESFENDASNEK 362
Query: 414 AYEYNEAMKLNA 425
++ + + N
Sbjct: 363 WFQSKRSAEPNG 374
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 82/195 (42%), Positives = 116/195 (59%)
Query: 450 GYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFA 509
+K +YY +KF E DK + YV+GL WV YYY + SW WFY YHY+P
Sbjct: 505 AWKTKYYLEKFPEWPQESYDKELVKLCENYVQGLQWVLHYYYHGIASWPWFYQYHYSPLT 564
Query: 510 SDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDF 569
SD+ ++ F LG+PFRP++QLMG LP S S +PE Y +LMT+P+SPIY FYP DF
Sbjct: 565 SDVVKGLGADLKFTLGQPFRPYEQLMGVLPDRSKSIVPEVYWDLMTNPNSPIYDFYPRDF 624
Query: 570 QIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVHPQHPLY 629
++DMNGK+ W+ +VK+PFIDEK LL L+++E RN + L + + Y
Sbjct: 625 ELDMNGKKMEWEAIVKIPFIDEKRLLSAMATKNDQLSQQEKSRNGFGVALKFTYNPEVAY 684
Query: 630 QQITLYCQLYHQLPP 644
+ ++ ++ P
Sbjct: 685 TYPSSLVGVFPEISP 699
>gi|321259283|ref|XP_003194362.1| 5'-3' exonuclease involved in mRNA decay; Kem1p [Cryptococcus
gattii WM276]
gi|317460833|gb|ADV22575.1| 5'-3' exonuclease involved in mRNA decay, putative; Kem1p
[Cryptococcus gattii WM276]
Length = 1456
Score = 299 bits (766), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 166/418 (39%), Positives = 240/418 (57%), Gaps = 77/418 (18%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGM-EFDNLYLDMNGI 59
MG+P F+RW+++RYPL+ + PN + FDNLYLDMNGI
Sbjct: 1 MGIPKFFRWISERYPLTSQLIT---------------------PNSIPTFDNLYLDMNGI 39
Query: 60 IHPCFHPDGKPAPTSYDD---------VFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRA 110
IH C HP P+S +D + +IF YIDH+F ++P+K+ ++AIDGVAPRA
Sbjct: 40 IHNCSHP-----PSSENDPHFRITEEQMILAIFAYIDHLFTKIKPQKVFFMAIDGVAPRA 94
Query: 111 KMNQQRTRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAV 170
KMNQQR+RRFRA KDA + R++ E+ G+ L ++ DSN ITPGT FMA
Sbjct: 95 KMNQQRSRRFRAGKDARDQ-------REKAEKNGEKLPDEK---AFDSNAITPGTPFMAR 144
Query: 171 LSAALQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCL 230
LS L+Y+++ R+++ W+ +VILS +VPGEGEHKI +IRL + P ++PNTRHCL
Sbjct: 145 LSQHLKYYVRKRISEDADWRNIRVILSGHDVPGEGEHKIQEFIRLNKAQPDYNPNTRHCL 204
Query: 231 YGLDADLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWN 290
YGLDADLIML L +H+ HF +LRE +T G++ +
Sbjct: 205 YGLDADLIMLGLLSHDPHFCLLREEVTF-GRKSR-------------------------- 237
Query: 291 GVDDTPIHKKKYQFLNIWVLREYLQYELDI--PNPPFPINFERIVDDFVFLCFFVGNDFL 348
+T + + L++ ++REYL E F + ERI+DDF+ + FVGNDFL
Sbjct: 238 --QNTELANTNFFLLHLSLMREYLDLEFSSLQTQISFEYDLERIIDDFILMAIFVGNDFL 295
Query: 349 PHMPTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQ 406
PH+P L I EGA+ + +Y+ + GYL + G + L R++ + +A +E + F+
Sbjct: 296 PHLPDLHINEGALERIWGMYKDILPTIDGYLNEHGTISLPRLQLLLDKLAEFEVKRFE 353
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 80/166 (48%), Positives = 110/166 (66%), Gaps = 6/166 (3%)
Query: 450 GYKERYYADKFEIS--NPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAP 507
G K +YY DK EI+ +P ++ +D+V Y+EGL W+ YYY+ V SW WFY YHY+P
Sbjct: 521 GIKRQYYHDKLEINYNDPAQM----QDLVHHYIEGLQWILNYYYKGVSSWGWFYKYHYSP 576
Query: 508 FASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPP 567
+DLK ++D++ F G+PF PF QLMG LP S +P YR+LM + +SPI FYP
Sbjct: 577 RITDLKGVADMKFEFDYGKPFTPFQQLMGVLPVDSMEHVPLAYRDLMYEETSPIIDFYPR 636
Query: 568 DFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRN 613
+F++DMNGK+ W+ VVK+PFID+ LL+ +V LT EE RN
Sbjct: 637 NFELDMNGKKQDWEAVVKIPFIDQNRLLKAMAARDVRLTPEERERN 682
>gi|400601005|gb|EJP68673.1| XRN 5'-3' exonuclease [Beauveria bassiana ARSEF 2860]
Length = 1398
Score = 299 bits (765), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 169/413 (40%), Positives = 236/413 (57%), Gaps = 65/413 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP F+RWL++RYP I ++ E+ EFD LYLDMNGII
Sbjct: 1 MGVPKFFRWLSERYP-PISQLIAEN-------------------RIPEFDCLYLDMNGII 40
Query: 61 HPCFHPDGKPAPT---SYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRT 117
H C H D T S +++F IF+YI+H+F ++P++L ++AIDGVAPRAKMNQQR
Sbjct: 41 HNCTHKDAGEDTTFRLSEEEMFIRIFNYIEHLFGKIKPKQLFFMAIDGVAPRAKMNQQRA 100
Query: 118 RRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQY 177
RRFR A E E E+ KE E KE+P DSN ITPGT+FMA LS LQY
Sbjct: 101 RRFRTA---LEVEKAREKAIKEGVEM-----PKEEP--FDSNCITPGTEFMAKLSRQLQY 150
Query: 178 FIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADL 237
F+ ++++ WQ +++LS VPGEGEHKIM YIR ++ PG++ N RHCLYGLDADL
Sbjct: 151 FVNKKVSEDTDWQGCEIVLSGHEVPGEGEHKIMEYIRNAKSQPGYNSNVRHCLYGLDADL 210
Query: 238 IMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPI 297
IML L +H+ HFS+LRE +T G+ N + +
Sbjct: 211 IMLGLLSHDPHFSLLREEVTF---------------------GRASKNKSK-------EL 242
Query: 298 HKKKYQFLNIWVLREYLQYELD----IPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPT 353
+ + L++ ++REYL+ E + F + ER++DDF+ + FFVGNDFLP++P
Sbjct: 243 EHQNFFLLHLCMVREYLEMEFQELKHQQDLGFEFDLERVIDDFILMAFFVGNDFLPNLPG 302
Query: 354 LEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQ 406
L I EGA+ + +Y+R GGYL + G + + R + I ++ E + F+
Sbjct: 303 LHINEGALADMFEIYKRVLPEEGGYLHENGVLNIKRALRMIAELSKVELKQFE 355
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 85/210 (40%), Positives = 123/210 (58%), Gaps = 12/210 (5%)
Query: 417 YNEAMKLNARRESSEELLQAPVAVADTVKLGEPGY---KERYYADKFEISNPEEIDKVKK 473
Y++A+ +N E+S+E + KL + Y K +YY KF + +
Sbjct: 487 YDKAVVVNDSSEASQEEYE---------KLYQEKYQAWKTKYYLQKFPEWESTAYAEEQT 537
Query: 474 DVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQ 533
++ YVEGL WV YYY+ + SW WFY YHYAP SD+ S+ ++ F G+PF+P++Q
Sbjct: 538 NLCENYVEGLQWVLFYYYRGIASWPWFYKYHYAPLISDVVKGSNAKLVFEKGQPFKPYEQ 597
Query: 534 LMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKL 593
LMG LP S +P Y +LMT+ SSPI FYP DF++DMNGK+ W+ VVK+PFIDEK
Sbjct: 598 LMGVLPDRSKKIVPTAYHDLMTNSSSPIIDFYPRDFELDMNGKKMDWEAVVKIPFIDEKR 657
Query: 594 LLRQTKKLEVFLTEEELFRNSVMLDLLYVH 623
LL + L+++E RN + L + +
Sbjct: 658 LLAAMETKNALLSDDEKSRNGFGVPLKFTY 687
>gi|406861681|gb|EKD14734.1| exonuclease II Exo2 [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 1395
Score = 298 bits (764), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 164/428 (38%), Positives = 236/428 (55%), Gaps = 64/428 (14%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP F+RW+++RYP +I ++ E+ EFD LYLDMNGII
Sbjct: 1 MGVPKFFRWMSERYP-AISQLIAEN-------------------RIPEFDCLYLDMNGII 40
Query: 61 HPCFHPDGKPA--PTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C H D A + + +F +IF+YI+H+F ++P++L ++AIDGVAPRAKMNQQR R
Sbjct: 41 HNCTHKDTDDAMFRMTEEQMFIAIFNYIEHLFGKIKPKQLFFMAIDGVAPRAKMNQQRAR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RFR A DA A + + KE K E DSN ITPGT FM L+ L+YF
Sbjct: 101 RFRTALDAENARDKAIKEGKEMP----------KEEAFDSNAITPGTAFMHKLTQQLKYF 150
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
I ++++ WQ +V+LS VPGEGEHKIM YIRL + P +D N RHCLYGLDADLI
Sbjct: 151 INKKVSEDTDWQGVEVVLSGHEVPGEGEHKIMEYIRLAKAQPDYDANIRHCLYGLDADLI 210
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
ML L +H+ HF +LRE +T G+Q K +
Sbjct: 211 MLGLLSHDPHFCLLREEVTF-GRQSKA---------------------------KSKELE 242
Query: 299 KKKYQFLNIWVLREYLQYELDIPNPP----FPINFERIVDDFVFLCFFVGNDFLPHMPTL 354
+ + +++ ++REYL+ E P + ERI+DDF+ + FFVGNDFLP++P L
Sbjct: 243 HQNFYLMHLCIVREYLELEFQELKEPGVLSASFDLERIIDDFILMAFFVGNDFLPNLPNL 302
Query: 355 EIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQA 414
I EGA+ L+ VY+ GG++ + G + + R+ ++ ++ E + F+ +
Sbjct: 303 HINEGALALMFKVYKTVLPKAGGFINEGGVINMQRLAMLLEELSHVEYRFFESENSDKSW 362
Query: 415 YEYNEAMK 422
++ + K
Sbjct: 363 FKAKQMAK 370
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 80/176 (45%), Positives = 111/176 (63%), Gaps = 2/176 (1%)
Query: 451 YKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFAS 510
+K+ YY KFE E + K + YV+GL WV YYY+ V SW W+Y YHY+P S
Sbjct: 506 WKDTYYKGKFEWDRNNETELTK--LCENYVQGLQWVLHYYYRGVVSWPWYYQYHYSPMIS 563
Query: 511 DLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQ 570
D+ + ++ F LG+PF P++QLMG LP S + +P Y +LMT+P+SPI FYP DF+
Sbjct: 564 DVIKGLNADVNFKLGQPFHPYEQLMGVLPDRSKTIVPSVYHDLMTNPNSPIIDFYPRDFE 623
Query: 571 IDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVHPQH 626
+DMNGK+ W+ VVK+PFIDEK LL + L+E+E FRN + + + H H
Sbjct: 624 LDMNGKKMEWEAVVKIPFIDEKRLLAAMAPKYLLLSEDEKFRNEFGVTVKFTHDPH 679
>gi|320590324|gb|EFX02767.1| exonuclease [Grosmannia clavigera kw1407]
Length = 1463
Score = 298 bits (763), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 167/412 (40%), Positives = 231/412 (56%), Gaps = 64/412 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP F+RWL++RYP +I ++ E+ EFD LYLDMNGII
Sbjct: 1 MGVPKFFRWLSERYP-AISQLIAEN-------------------RIPEFDCLYLDMNGII 40
Query: 61 HPCFHPDGKPAPTSY--DDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C H D A T +++F IF+YI+H+F ++P++L ++AIDGVAPRAKMNQQR+R
Sbjct: 41 HNCTHSDSDDAFTRLGEEEMFIRIFNYIEHLFGKIKPKQLFFMAIDGVAPRAKMNQQRSR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RFR A DA A +K E +L + + DSN ITPGT+FMA LS LQYF
Sbjct: 101 RFRTALDAEVAR------KKAIAEGAQLPT----DDPFDSNCITPGTEFMAKLSKQLQYF 150
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
+ ++++ WQ V+LS +VPGEGEHKIM YIR + + N RHCLYGLDADLI
Sbjct: 151 VNKKVSEDKEWQQCTVVLSGHDVPGEGEHKIMEYIRNAKAQKDYSANMRHCLYGLDADLI 210
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
ML L +H+ HF +LRE +T G+Q K +
Sbjct: 211 MLGLLSHDPHFCLLREEVTF-GRQTK---------------------------TKSKELE 242
Query: 299 KKKYQFLNIWVLREYLQYELD----IPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTL 354
+ + L++ ++REYL+ E PF N ERI+DDF+ + FFVGNDFLP++P L
Sbjct: 243 HQNFYLLHLCIVREYLELEFQELKTDKTMPFAFNMERIIDDFILMAFFVGNDFLPNLPRL 302
Query: 355 EIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQ 406
I EGA+ + +Y+R GY+ + G V L R+ ++ + E + F+
Sbjct: 303 HINEGALATMFSIYKRVLPKCEGYINEGGAVNLKRLGLLLEEFSKEEFRFFE 354
Score = 159 bits (402), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 75/163 (46%), Positives = 105/163 (64%), Gaps = 1/163 (0%)
Query: 451 YKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFAS 510
+K+ YY +KF ++ + ++V+K + YV+GL WV YYY+ + SW WFY YHY+P S
Sbjct: 555 WKDGYYREKFAWTDGQLSEEVRK-LCENYVQGLQWVLYYYYRGIASWPWFYHYHYSPLIS 613
Query: 511 DLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQ 570
D+ ++ F LG+PF+PF+QLMG LP S +P Y LMT+ SPI FYP DF+
Sbjct: 614 DVIKGLGADLNFKLGQPFKPFEQLMGVLPDRSKKIVPTVYWGLMTEEDSPIVDFYPRDFE 673
Query: 571 IDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRN 613
+DMNGK+ W+ VVK+PFIDE+ LL K L+ +E RN
Sbjct: 674 LDMNGKKMEWEAVVKIPFIDERRLLTAMKPKNALLSADEQSRN 716
>gi|134112225|ref|XP_775088.1| hypothetical protein CNBE3620 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50257740|gb|EAL20441.1| hypothetical protein CNBE3620 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 1473
Score = 298 bits (763), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 164/418 (39%), Positives = 240/418 (57%), Gaps = 77/418 (18%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGM-EFDNLYLDMNGI 59
MG+P F+RW+++RYPL+ + PN + FDNLYLDMNGI
Sbjct: 1 MGIPKFFRWISERYPLTSQLIT---------------------PNSIPTFDNLYLDMNGI 39
Query: 60 IHPCFHPDGKPAPTSYDD---------VFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRA 110
IH C HP P++ +D + +IF YIDH+F ++P+K+ ++AIDGVAPRA
Sbjct: 40 IHNCSHP-----PSTENDPHFRITEEQMILAIFAYIDHLFTKIKPQKVFFMAIDGVAPRA 94
Query: 111 KMNQQRTRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAV 170
KMNQQR+RRFRA KDA + R++ E+ G+ L ++ DSN ITPGT FMA
Sbjct: 95 KMNQQRSRRFRAGKDARDQ-------REKAEKNGEKLPDEK---AFDSNAITPGTPFMAR 144
Query: 171 LSAALQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCL 230
LS L+Y+++ R+++ W+ +VILS +VPGEGEHKI +IRL + P ++PNTRHCL
Sbjct: 145 LSQHLKYYVRKRISEDADWRSIRVILSGHDVPGEGEHKIQEFIRLNKAQPDYNPNTRHCL 204
Query: 231 YGLDADLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWN 290
YGLDADLIML L +H+ HF +LRE +T G++ +
Sbjct: 205 YGLDADLIMLGLLSHDPHFCLLREEVTF-GRKSR-------------------------- 237
Query: 291 GVDDTPIHKKKYQFLNIWVLREYLQYELDI--PNPPFPINFERIVDDFVFLCFFVGNDFL 348
+T + + L++ ++REYL E F + ERI+DDF+ + FVGNDFL
Sbjct: 238 --QNTELANTNFFLLHLSLMREYLDLEFSSLQTQISFEYDLERIIDDFILMAIFVGNDFL 295
Query: 349 PHMPTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQ 406
PH+P L I EGA+ + +Y+ + GY+ + G + L R++ + +A +E + F+
Sbjct: 296 PHLPDLHINEGALERIWGMYKDILPTIDGYINEHGTISLPRLQLLLDKLAEFEVKRFE 353
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 82/175 (46%), Positives = 115/175 (65%), Gaps = 7/175 (4%)
Query: 452 KERYYADKFEIS--NPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFA 509
K +YY DK EI+ +P ++ +D+V Y+EGL W+ YYY+ V SW WFY YHY+P
Sbjct: 523 KRQYYHDKLEINYNDPAQM----QDLVHHYIEGLQWILNYYYKGVSSWGWFYKYHYSPRI 578
Query: 510 SDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDF 569
+DLK ++D++ F G+PF PF QLMG LP S +P YR+LM + +SPI FYP +F
Sbjct: 579 TDLKGVADMKFEFDYGKPFTPFQQLMGVLPVDSMDHVPLAYRDLMYEETSPIIDFYPRNF 638
Query: 570 QIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRN-SVMLDLLYVH 623
++DMNGK+ W+ VVK+PFID+ LL+ +V LT EE RN S +L +V+
Sbjct: 639 ELDMNGKKQDWEAVVKIPFIDQNRLLKAMAARDVRLTPEERERNKSGVLSTQFVY 693
>gi|58267550|ref|XP_570931.1| Exonuclease II [Cryptococcus neoformans var. neoformans JEC21]
gi|57227165|gb|AAW43624.1| Exonuclease II, putative [Cryptococcus neoformans var. neoformans
JEC21]
Length = 1457
Score = 298 bits (763), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 164/418 (39%), Positives = 240/418 (57%), Gaps = 77/418 (18%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGM-EFDNLYLDMNGI 59
MG+P F+RW+++RYPL+ + PN + FDNLYLDMNGI
Sbjct: 1 MGIPKFFRWISERYPLTSQLIT---------------------PNSIPTFDNLYLDMNGI 39
Query: 60 IHPCFHPDGKPAPTSYDD---------VFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRA 110
IH C HP P++ +D + +IF YIDH+F ++P+K+ ++AIDGVAPRA
Sbjct: 40 IHNCSHP-----PSTENDPHFRITEEQMILAIFAYIDHLFTKIKPQKVFFMAIDGVAPRA 94
Query: 111 KMNQQRTRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAV 170
KMNQQR+RRFRA KDA + R++ E+ G+ L ++ DSN ITPGT FMA
Sbjct: 95 KMNQQRSRRFRAGKDARDQ-------REKAEKNGEKLPDEK---AFDSNAITPGTPFMAR 144
Query: 171 LSAALQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCL 230
LS L+Y+++ R+++ W+ +VILS +VPGEGEHKI +IRL + P ++PNTRHCL
Sbjct: 145 LSQHLKYYVRKRISEDADWRSIRVILSGHDVPGEGEHKIQEFIRLNKAQPDYNPNTRHCL 204
Query: 231 YGLDADLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWN 290
YGLDADLIML L +H+ HF +LRE +T G++ +
Sbjct: 205 YGLDADLIMLGLLSHDPHFCLLREEVTF-GRKSR-------------------------- 237
Query: 291 GVDDTPIHKKKYQFLNIWVLREYLQYELDI--PNPPFPINFERIVDDFVFLCFFVGNDFL 348
+T + + L++ ++REYL E F + ERI+DDF+ + FVGNDFL
Sbjct: 238 --QNTELANTNFFLLHLSLMREYLDLEFSSLQTQISFEYDLERIIDDFILMAIFVGNDFL 295
Query: 349 PHMPTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQ 406
PH+P L I EGA+ + +Y+ + GY+ + G + L R++ + +A +E + F+
Sbjct: 296 PHLPDLHINEGALERIWGMYKDILPTIDGYINEHGTISLPRLQLLLDKLAEFEVKRFE 353
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 79/164 (48%), Positives = 109/164 (66%), Gaps = 6/164 (3%)
Query: 452 KERYYADKFEIS--NPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFA 509
K +YY DK EI+ +P ++ +D+V Y+EGL W+ YYY+ V SW WFY YHY+P
Sbjct: 523 KRQYYHDKLEINYNDPAQM----QDLVHHYIEGLQWILNYYYKGVSSWGWFYKYHYSPRI 578
Query: 510 SDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDF 569
+DLK ++D++ F G+PF PF QLMG LP S +P YR+LM + +SPI FYP +F
Sbjct: 579 TDLKGVADMKFEFDYGKPFTPFQQLMGVLPVDSMDHVPLAYRDLMYEETSPIIDFYPRNF 638
Query: 570 QIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRN 613
++DMNGK+ W+ VVK+PFID+ LL+ +V LT EE RN
Sbjct: 639 ELDMNGKKQDWEAVVKIPFIDQNRLLKAMAARDVRLTPEERERN 682
>gi|89269888|emb|CAJ83489.1| 5'-3' exoribonuclease 1 [Xenopus (Silurana) tropicalis]
Length = 385
Score = 298 bits (762), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 165/411 (40%), Positives = 240/411 (58%), Gaps = 61/411 (14%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP FYRW+++RYP + +VV+E Q+ EFDNLYLDMNGII
Sbjct: 1 MGVPKFYRWISERYP-CLSEVVKEH-QIP------------------EFDNLYLDMNGII 40
Query: 61 HPCFHP--DGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C HP D + D +F IF Y++ +F +++PRK+ ++A+DGVAPRAKMNQQR R
Sbjct: 41 HQCSHPNDDDVHFRITEDKIFADIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RFR+AK+A E++++K E+ G++L + + DSN ITPGT+FMA L L+YF
Sbjct: 101 RFRSAKEA------EDKIKKAVEK-GEVLPTEAR---FDSNCITPGTEFMARLHEHLKYF 150
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
+ +++ WQ + LS PGEGEHKIM +IR Q+ P DPNTRHCLYGLDADLI
Sbjct: 151 VNMKISTDKSWQGVAIYLSGHETPGEGEHKIMEFIRSQKTKPDHDPNTRHCLYGLDADLI 210
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
ML L +HE+HFS+LRE + G++ + V T
Sbjct: 211 MLGLTSHEVHFSLLREEVRFGGKKNQKRV---------------------------TAPE 243
Query: 299 KKKYQFLNIWVLREYLQYEL-DIPNP-PFPINFERIVDDFVFLCFFVGNDFLPHMPTLEI 356
+ + L++ ++REY+ YE + N F + ERI+DD++ + F VGNDF+PH+P L I
Sbjct: 244 ETTFHLLHLSLMREYIDYEFSSLKNKISFEYDVERIIDDWILMGFLVGNDFIPHLPHLHI 303
Query: 357 REGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQK 407
A+ LL Y +GGY+ + G + L K+++ ++ ++ + F +
Sbjct: 304 NHDALPLLYRTYISVLPTIGGYINENGYLNLYNFGKYLEKLSDFDREHFNE 354
>gi|121718863|ref|XP_001276218.1| exonuclease Kem1, putative [Aspergillus clavatus NRRL 1]
gi|119404416|gb|EAW14792.1| exonuclease Kem1, putative [Aspergillus clavatus NRRL 1]
Length = 1408
Score = 298 bits (762), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 177/445 (39%), Positives = 253/445 (56%), Gaps = 76/445 (17%)
Query: 1 MGVPAFYRWLADRYP-LSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGI 59
MGVP F+RWL++RYP +S++ P EFD LYLDMNGI
Sbjct: 1 MGVPKFFRWLSERYPTISMLIAENRIP---------------------EFDALYLDMNGI 39
Query: 60 IHPCFHPDGKPAPT---SYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQR 116
IH C H D +PT + D +F +IF+YI+H++ ++P+KL ++AIDGVAPRAKMNQQR
Sbjct: 40 IHNCTHKDSD-SPTFRMTEDKMFIAIFNYIEHLYGKIKPKKLFFMAIDGVAPRAKMNQQR 98
Query: 117 TRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQ 176
RRFR A DA A KE A + KE + DSN ITPGT+FMA L+ L+
Sbjct: 99 ARRFRTALDAEVA--------KEKAIAQGIEMPKE--DAFDSNCITPGTEFMAKLTQQLK 148
Query: 177 YFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDAD 236
YFI ++++ WQ +++LS VPGEGEHKIM YIR + P +D N RHCLYGLDAD
Sbjct: 149 YFISKKISEDKDWQGVEIVLSGHEVPGEGEHKIMEYIRHAKAQPDYDSNIRHCLYGLDAD 208
Query: 237 LIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTP 296
LIML L +H+ HF +LRE +T Q +K KP +
Sbjct: 209 LIMLGLLSHDPHFCLLREEVTFGRQVQK----------------KPKE------------ 240
Query: 297 IHKKKYQFLNIWVLREYLQYELDIPNPP----FPINFERIVDDFVFLCFFVGNDFLPHMP 352
+ + + L++ ++REYL+ E FP + ER++DDF+ + FFVGNDFLP++P
Sbjct: 241 LEHQNFFLLHLCMVREYLELEFQELEQEGVLDFPFDMERVIDDFILMAFFVGNDFLPNLP 300
Query: 353 TLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQ 412
L I EGA+ L+ +Y+ MGGY+ + G + L R+ +++++ E + F+
Sbjct: 301 NLHINEGALALMFKIYKEVLPKMGGYVNEGGVINLKRLGMLVEALSDVEFRFFE------ 354
Query: 413 QAYEYNEAMKLNARRESSEELLQAP 437
EY++A + A+R++ E + P
Sbjct: 355 --VEYSDAKWITAKRKAIENDFEPP 377
Score = 166 bits (419), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 86/220 (39%), Positives = 124/220 (56%), Gaps = 6/220 (2%)
Query: 451 YKERYYADKFE--ISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPF 508
+K++YY KF + N EE+ K+ ++ YV+GL WV YYY+ + SW WF+ YHYAP
Sbjct: 509 WKDKYYMSKFGWGLDNHEEMRKLTEN----YVQGLQWVLYYYYRGIASWPWFFKYHYAPM 564
Query: 509 ASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPD 568
SD+ ++ F LG+PF+P++QLMG LP S +P YR+LMT P SPI FYP D
Sbjct: 565 ISDVTKGLKADMNFQLGQPFKPYEQLMGVLPDRSKKIVPAAYRDLMTSPDSPIIDFYPRD 624
Query: 569 FQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVHPQHPL 628
F++DMNGK+ W+ VVK+PFI+E+ LL LT EE RN + L + +
Sbjct: 625 FELDMNGKKMEWEAVVKIPFIEERRLLDALATKSHLLTPEEKVRNDFGVSLKFTYSPDAN 684
Query: 629 YQQITLYCQLYHQLPPQDRFAWEIDVNASGGMNGYIWLCE 668
Y + ++ +P D+ G+ YI L +
Sbjct: 685 YSYPSSLPGVFPDIPNCHCIENVFDLPTMDGLEPYIGLVD 724
>gi|380483599|emb|CCF40522.1| 5'-3' exoribonuclease, partial [Colletotrichum higginsianum]
Length = 553
Score = 297 bits (761), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 166/413 (40%), Positives = 234/413 (56%), Gaps = 65/413 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP F+RWL++RYP +I ++ E+ EFD LYLDMNGII
Sbjct: 1 MGVPKFFRWLSERYP-AISQLIAEN-------------------RIPEFDCLYLDMNGII 40
Query: 61 HPCFHPDGKPAPT---SYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRT 117
H C H D T S +++F IF+YI+H+F ++P++L ++AIDGVAPRAKMNQQR
Sbjct: 41 HNCTHKDTGEDTTFRLSEEEMFIRIFNYIEHLFGKIKPKQLFFMAIDGVAPRAKMNQQRA 100
Query: 118 RRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQY 177
RRFR A D +A K E ++ KE P DSN ITPGT+FMA L+ L+Y
Sbjct: 101 RRFRTALDTEKARD------KAISEGVEM--PKEPP--FDSNCITPGTEFMAKLTQQLKY 150
Query: 178 FIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADL 237
F+ ++++ WQ +++LS VPGEGEHKIM YIR + P +DPN RHCLYGLDADL
Sbjct: 151 FVNKKVSEDADWQGCEIVLSGHEVPGEGEHKIMEYIRNAKAQPDYDPNVRHCLYGLDADL 210
Query: 238 IMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPI 297
IML L +H+ HF +LRE +T G+V N +
Sbjct: 211 IMLGLLSHDPHFCLLREEVTF----------GRV------------------NKAKTREL 242
Query: 298 HKKKYQFLNIWVLREYLQYELDIPNPP----FPINFERIVDDFVFLCFFVGNDFLPHMPT 353
+ + L++ ++REYL+ E P FP + ER++DDF+ + FFVGNDFLP++P
Sbjct: 243 EHQNFYLLHLCIVREYLELEFQELQQPGRLSFPFDLERVIDDFILMAFFVGNDFLPNLPR 302
Query: 354 LEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQ 406
L I EGA+ + +Y+ GY+ + G + L R+++ + +A E F+
Sbjct: 303 LHINEGALAAMFRIYKSVLPQGDGYINEGGVINLPRLQRLLNELAKDETNQFE 355
Score = 44.7 bits (104), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 27/48 (56%)
Query: 450 GYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSW 497
G+K +YY KF PE+ D + YV+GL WV YYY+ + SW
Sbjct: 504 GWKTKYYLQKFPEWAPEQYDAELTKLCENYVQGLQWVLYYYYRGIASW 551
>gi|452981894|gb|EME81653.1| hypothetical protein MYCFIDRAFT_215434 [Pseudocercospora fijiensis
CIRAD86]
Length = 1239
Score = 297 bits (761), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 169/395 (42%), Positives = 229/395 (57%), Gaps = 70/395 (17%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP F+RWL++RYP I ++ E+ EFDNLYLDMNGII
Sbjct: 1 MGVPKFFRWLSERYP-PISQLIAEN-------------------RIPEFDNLYLDMNGII 40
Query: 61 HPCFHPDG---KPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRT 117
H C H D A S D++F IF+YI+ +F ++P+KL ++AIDGVAPRAKMNQQR+
Sbjct: 41 HNCTHNDSDSVTKARLSEDEMFLKIFNYIEFLFGKIKPQKLFFMAIDGVAPRAKMNQQRS 100
Query: 118 RRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQY 177
RRFR A DA E+ R + G+ L KE P DSN ITPGT+FMA L+ L+Y
Sbjct: 101 RRFRTALDA-------EKARDKAIAEGREL-PKEDP--FDSNCITPGTEFMARLTQQLKY 150
Query: 178 FIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADL 237
F+ ++++ WQ +++LS VPGEGEHKIM YIR ++ +DPN RHCLYGLDADL
Sbjct: 151 FVAKKVSEDGDWQGCEIVLSGHEVPGEGEHKIMEYIRQAKSQLDYDPNVRHCLYGLDADL 210
Query: 238 IMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPI 297
IML L +H+ HF +LRE +T G+Q K +
Sbjct: 211 IMLGLLSHDPHFCLLREEVTF-GRQGKS---------------------------KSQDL 242
Query: 298 HKKKYQFLNIWVLREYLQYELD-------IPNPPFPINFERIVDDFVFLCFFVGNDFLPH 350
+ + L++ ++REYL+ E + N PF + ERI+DDF+ + FFVGNDFLP+
Sbjct: 243 EHQNFFLLHLCIVREYLELEFQELKEKGALGNLPF--DMERIIDDFILMAFFVGNDFLPN 300
Query: 351 MPTLEIREGAINLLMHVYRREFTAMGGYLTDAGEV 385
+P L I EGA+ L+ VY++ GGY+ D G +
Sbjct: 301 LPYLHINEGALALMFAVYKKILPKAGGYINDGGTI 335
>gi|336262386|ref|XP_003345977.1| hypothetical protein SMAC_06532 [Sordaria macrospora k-hell]
gi|380089569|emb|CCC12451.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 1428
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 165/395 (41%), Positives = 229/395 (57%), Gaps = 63/395 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP F+RWL++RYP +I ++ E+ EFD LYLDMNGII
Sbjct: 1 MGVPKFFRWLSERYP-AISQLIAEN-------------------RIPEFDCLYLDMNGII 40
Query: 61 HPCFHPDGKPAP--TSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C H D + +++F +IF+YI+H+F ++P+KL ++AIDGVAPRAKMNQQR R
Sbjct: 41 HNCTHKDTSDVQFRMTEEEMFIAIFNYIEHLFGKIKPKKLFFMAIDGVAPRAKMNQQRAR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RFR A D +A + R KE KE+P DSN ITPGT+FMA LS L+YF
Sbjct: 101 RFRTALDNEKARDKAIREGKEL--------PKEEP--FDSNCITPGTEFMAKLSQQLRYF 150
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
I ++++ WQ +++LS VPGEGEHKIM YIR R P + N RHCLYGLDADLI
Sbjct: 151 INKKVSEDKDWQQPEIVLSGHEVPGEGEHKIMEYIRNARAQPDYSANVRHCLYGLDADLI 210
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
ML L +H+ HF +LRE +T G PA +
Sbjct: 211 MLGLLSHDPHFCLLREEVTF------------------------GRGPAKHK---TKGLE 243
Query: 299 KKKYQFLNIWVLREYLQYEL-DIPNP---PFPINFERIVDDFVFLCFFVGNDFLPHMPTL 354
++ + +++ ++REYL+ E D+ P FP + E+++DDF+ + FFVGNDFLP++P L
Sbjct: 244 EQNFYLMHLCIVREYLELEFQDLKKPGAMSFPFDMEKVIDDFILMAFFVGNDFLPNLPRL 303
Query: 355 EIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDR 389
I EGA++L+ +Y+ GY+ + G+V L R
Sbjct: 304 HINEGALSLMFRIYKEILPRGDGYINEGGKVNLQR 338
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 78/173 (45%), Positives = 110/173 (63%)
Query: 451 YKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFAS 510
+K++YYA+KFE PE ++ + + YV+GL WV YYY+ + SW WFY YHYAP S
Sbjct: 505 WKDKYYAEKFEEWTPENKEEELRHLTENYVQGLQWVLYYYYRGIASWPWFYRYHYAPMIS 564
Query: 511 DLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQ 570
D+ ++ F +G+PF+P++QLMG LP S +P Y +LMT+P SPI FYP DF+
Sbjct: 565 DVVKGLKADLNFKMGQPFKPYEQLMGVLPDRSKKIVPTVYWDLMTNPDSPIIDFYPRDFE 624
Query: 571 IDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVH 623
+DMNGK+ W+ VVK+PFIDEK LL L++ E RN + L + +
Sbjct: 625 LDMNGKKMDWEAVVKIPFIDEKRLLAAMGPKNELLSDVEKSRNDFGVALKFTY 677
>gi|50312097|ref|XP_456080.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49645216|emb|CAG98788.1| KLLA0F22385p [Kluyveromyces lactis]
Length = 1453
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 160/412 (38%), Positives = 233/412 (56%), Gaps = 63/412 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MG+P F+ ++++R+P + +DG + EFDNLYLDMN I+
Sbjct: 1 MGIPKFFHFISERWP-------QISQLIDGSQIP-------------EFDNLYLDMNSIL 40
Query: 61 HPCFHPDGKPAPT--SYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C H DG + S ++V+ IF YIDH+F ++P++ Y+AIDGVAPRAKMNQQR R
Sbjct: 41 HNCTHGDGSEVNSRLSEEEVYSKIFSYIDHLFHTIKPKQTFYMAIDGVAPRAKMNQQRAR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RFR A DA +A L+K E +L K E DSN ITPGT+FMA L+ L+YF
Sbjct: 101 RFRTAMDAEKA------LQKAIENGDEL----PKGEPFDSNAITPGTEFMAKLTENLKYF 150
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
I ++ WQ KVI S VPGEGEHKIM YIR R ++PNTRHC+YGLDADLI
Sbjct: 151 IHDKITNDTRWQNVKVIFSGHEVPGEGEHKIMDYIRAIRAQEDYNPNTRHCIYGLDADLI 210
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
+L L+TH+ HF +LRE +T + +
Sbjct: 211 ILGLSTHDHHFCLLREEVTFGKRSSSV-----------------------------KTLE 241
Query: 299 KKKYQFLNIWVLREYLQYELD--IPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEI 356
+ + L++ +LREYL E + + F +FER++DDF+F+ F +GNDFLP++P L +
Sbjct: 242 TQNFFLLHLSILREYLALEFEEITDSVQFEYDFERVLDDFIFVLFTIGNDFLPNLPDLHL 301
Query: 357 REGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKR 408
++GA +L+ ++ M GY+ + G++ L R +++ ++ +E F+K+
Sbjct: 302 KKGAFPVLLQTFKEALQHMDGYINEQGKINLARFSIWLKYLSDFEYLNFEKK 353
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 75/178 (42%), Positives = 107/178 (60%), Gaps = 7/178 (3%)
Query: 451 YKERYYADK--FEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPF 508
+K++YY DK F I++ + + K++ YV GL WV YYY+ SW W+Y YHYAP
Sbjct: 511 WKDQYYKDKLDFSINDTDSL----KEMTENYVGGLQWVLYYYYRGCPSWSWYYRYHYAPR 566
Query: 509 ASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPD 568
SD+ D I F G+PF+PF QLM LP S + +P YR LM D SPI FYP +
Sbjct: 567 ISDVIKGIDQNIEFHKGQPFKPFQQLMAVLPERSKNLIPVVYRPLMYDEHSPILDFYPNE 626
Query: 569 FQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYV-HPQ 625
++D+NGK W+ VVK+ F+D+K L+ + L+ +E RNS DL+++ +PQ
Sbjct: 627 VELDLNGKTADWEAVVKISFVDQKRLVEAMAPYDAKLSPDEKKRNSFGTDLIFIFNPQ 684
>gi|358392275|gb|EHK41679.1| hypothetical protein TRIATDRAFT_228664 [Trichoderma atroviride IMI
206040]
Length = 1391
Score = 297 bits (760), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 168/418 (40%), Positives = 234/418 (55%), Gaps = 65/418 (15%)
Query: 3 VPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGIIHP 62
VP F+RWL++RYP +I V+ E+ EFD LYLDMNGIIH
Sbjct: 9 VPKFFRWLSERYP-AISQVIAEN-------------------RIPEFDCLYLDMNGIIHN 48
Query: 63 CFHPDGKPAPT---SYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRR 119
C H D T S +++F IF+YI+H+F ++P+KL ++AIDGVAPRAKMNQQR RR
Sbjct: 49 CTHKDAGEDTTFRLSEEEMFIRIFNYIEHLFGKIKPKKLFFMAIDGVAPRAKMNQQRARR 108
Query: 120 FRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFI 179
FR A D +A + R E KE+P DSN ITPGT+FMA LS L+YF+
Sbjct: 109 FRTALDVEKARDKAIREGVEL--------PKEEP--FDSNCITPGTEFMAKLSQQLRYFV 158
Query: 180 QARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIM 239
++++ WQ V+LS VPGEGEHKIM YIR + P +DPN RHCLYGLDADLIM
Sbjct: 159 NKKISEDTDWQGCDVVLSGHEVPGEGEHKIMEYIRNAKAQPNYDPNVRHCLYGLDADLIM 218
Query: 240 LSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIHK 299
L L +H+ HF +LRE +T G+ K +
Sbjct: 219 LGLLSHDPHFCLLREEVTF-GRASK---------------------------TKSKELEH 250
Query: 300 KKYQFLNIWVLREYLQYEL-DIPNP---PFPINFERIVDDFVFLCFFVGNDFLPHMPTLE 355
+ + L++ ++REYL+ E ++ N F + ER++DDF+ + FFVGNDFLP++P L
Sbjct: 251 QNFYLLHLCIVREYLEMEFQELQNKGALKFQFDLERVIDDFILMAFFVGNDFLPNLPGLH 310
Query: 356 IREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQ 413
I EGA+ + +Y+ GY+ + G + LDR+++ + ++ E F+ QQ
Sbjct: 311 INEGALANMFRIYKSVLPQCEGYINENGVIHLDRLQRLLDELSKTELDNFEYEVSDQQ 368
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 92/169 (54%), Gaps = 7/169 (4%)
Query: 458 DKFEISN--PEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSW-QWFYPYHYAPFASDLKD 514
DK I++ PE+ K +++ + +G W +YY Q W Q Y +
Sbjct: 491 DKATIADVSPEDAQKQYEELYQQKYQG--WKTKYYLQKFEEWPQDKYEEEQKRLCENYGL 548
Query: 515 LSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMN 574
+DL F LG+PF+P +QLMG LP S +P Y +LMT+ +SPI FYP DF++DMN
Sbjct: 549 GADL--NFKLGQPFKPNEQLMGVLPDRSKKIVPAVYHDLMTNANSPIIDFYPRDFELDMN 606
Query: 575 GKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVH 623
GK+ W+ VVK+PFIDE LL L++++ RN + L + +
Sbjct: 607 GKKMEWEAVVKIPFIDEARLLAAMAPQNELLSDDQKARNGFGVPLKFTY 655
>gi|330916279|ref|XP_003297360.1| hypothetical protein PTT_07733 [Pyrenophora teres f. teres 0-1]
gi|311330012|gb|EFQ94550.1| hypothetical protein PTT_07733 [Pyrenophora teres f. teres 0-1]
Length = 1394
Score = 297 bits (760), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 173/438 (39%), Positives = 245/438 (55%), Gaps = 69/438 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP F+RW+++RYP I ++ E+ EFD LYLDMNGII
Sbjct: 1 MGVPKFFRWMSERYP-GISQLIAEN-------------------RIPEFDCLYLDMNGII 40
Query: 61 HPCFHPDGKP--APTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C H D A S D +F SIF+YI+H+F ++P++L ++AIDGVAPRAKMNQQR R
Sbjct: 41 HNCTHNDSDSVTARKSEDQMFISIFNYIEHLFGKIKPKQLFFMAIDGVAPRAKMNQQRAR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RFR A D +A E+ +R+ E + E DSN ITPGT FMA L+ L+YF
Sbjct: 101 RFRTALDTEKAR--EKAIREGVEMPTE--------EAFDSNCITPGTAFMAKLTQQLKYF 150
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
I ++++ WQ +V+LS VPGEGEHK+M YIR + PG+DPN RHCLYGLDADLI
Sbjct: 151 INKKVSEDIDWQGVEVVLSGHEVPGEGEHKVMEYIRQAKAQPGYDPNRRHCLYGLDADLI 210
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
ML L +H+ HFS+LRE +T G+Q + +
Sbjct: 211 MLGLLSHDPHFSLLREEVTF-GRQSQA---------------------------KSKELE 242
Query: 299 KKKYQFLNIWVLREYLQYELDIPNPP----FPINFERIVDDFVFLCFFVGNDFLPHMPTL 354
+ + +++ ++REYL+ E P FP + ER++DDF+ + FFVGNDFLP++P L
Sbjct: 243 HQNFYLMHLCIVREYLELEFQELEEPGALSFPFDMERVIDDFILMAFFVGNDFLPNLPHL 302
Query: 355 EIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTR---- 410
I EGA+ L+ +VY+ GY+ + G + ++R+ + +A E + F+
Sbjct: 303 HINEGALALMFNVYKTVLPKGKGYINEEGVINMERLATLLDELADIEYRHFESENSDAAW 362
Query: 411 -IQQAYEYNEAMKLNARR 427
++ + MK ARR
Sbjct: 363 FKGKSLGKEDVMKKTARR 380
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 83/178 (46%), Positives = 110/178 (61%), Gaps = 6/178 (3%)
Query: 450 GYKERYYADKFEI--SNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAP 507
+K YY KFE SN EE+ ++ ++ YV+GL WV YYY+ V SW W+Y YHY+P
Sbjct: 511 AWKNDYYKSKFEWDRSNEEELRRLTEN----YVQGLQWVLYYYYRGVASWPWYYQYHYSP 566
Query: 508 FASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPP 567
SD+K +I F LG+PF+PF QLMG LP S S +P+ Y LMT+ SPI FYP
Sbjct: 567 MISDVKRGLKADINFKLGQPFKPFQQLMGVLPDRSKSIVPKAYWPLMTNEDSPIIDFYPR 626
Query: 568 DFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVHPQ 625
DF +DMNGK+ W+ VVK+PFI E LL+ E LT +E RNS + L + + +
Sbjct: 627 DFTLDMNGKKQDWEAVVKIPFIQEDRLLKAMATKEQDLTPDEKARNSFGVSLKFTYAK 684
>gi|303319605|ref|XP_003069802.1| exonuclease, putative [Coccidioides posadasii C735 delta SOWgp]
gi|240109488|gb|EER27657.1| exonuclease, putative [Coccidioides posadasii C735 delta SOWgp]
gi|320040722|gb|EFW22655.1| exonuclease [Coccidioides posadasii str. Silveira]
Length = 1445
Score = 296 bits (759), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 181/460 (39%), Positives = 253/460 (55%), Gaps = 95/460 (20%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP F+RWL++RYP +I ++ E+ EFD LYLDMNGII
Sbjct: 1 MGVPKFFRWLSERYP-AISQLIAEN-------------------RIPEFDCLYLDMNGII 40
Query: 61 HPCFHPDGKPAPT---SYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRT 117
H C H D +PT + D +F +IF+YI+H+F ++P+KL ++AIDGVAPRAKMNQQR
Sbjct: 41 HNCTHKDSD-SPTFRMTEDKMFIAIFNYIEHLFGKIKPKKLFFMAIDGVAPRAKMNQQRA 99
Query: 118 RRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQY 177
RRFR A DA A+ E+ +R+ E KE P DSN ITPGT+FMA L+ L+Y
Sbjct: 100 RRFRTALDAEIAK--EKAIREGIE------MPKEDP--FDSNCITPGTEFMAKLTKQLKY 149
Query: 178 FIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADL 237
FI ++++ WQ +VILS VPGEGEHKIM YIR + P +DPN RHCLYGLDADL
Sbjct: 150 FINKKVSEDAKWQGVEVILSGHEVPGEGEHKIMEYIRQAKAQPDYDPNVRHCLYGLDADL 209
Query: 238 IMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPI 297
IML L +H+ HF +LRE +T Q +K +
Sbjct: 210 IMLGLLSHDPHFCLLREEVTFGRQNQKKV----------------------------KEL 241
Query: 298 HKKKYQFLNIWVLREY-------------LQYELDIPNPPFPINFERIVDDFVFLCFFVG 344
+ + L++ ++REY LQ+E D+ ER++DDF+ + FFVG
Sbjct: 242 EHQNFYLLHLCIVREYLELEFQELEQEGALQFEFDM---------ERVIDDFILMAFFVG 292
Query: 345 NDFLPHMPTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQI 404
NDFLP++P L I EGA+ + VY+ + GY+ + G + L+R+ + S+ E +
Sbjct: 293 NDFLPNLPNLHINEGALAWMFKVYKEVLPKLDGYINERGRINLNRLGVLLDSLGDVEFRF 352
Query: 405 FQKRTRIQQAYEYNEAMKLN---ARRESSEELLQAPVAVA 441
F+ EY+++ L +R E E+L P A+
Sbjct: 353 FEA--------EYSDSRWLKSKLSRGEEKPEILDDPKALT 384
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 83/175 (47%), Positives = 107/175 (61%), Gaps = 6/175 (3%)
Query: 451 YKERYYADKFE--ISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPF 508
+K +YY KF N EE+ K+ ++ YV+GL WV YYY+ V SW WFY YHY+P
Sbjct: 514 WKNKYYEGKFGWGTDNDEEMRKLTEN----YVQGLQWVLYYYYRGVASWPWFYRYHYSPM 569
Query: 509 ASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPD 568
SD+K ++ F LG+PF PF QLMG LP S +P+ Y LM P SPI FYP D
Sbjct: 570 ISDVKRGLAADMDFKLGQPFFPFQQLMGVLPDRSKKIVPQAYHELMISPDSPIIDFYPRD 629
Query: 569 FQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVH 623
F++DMNGK+ W+ VVK+PFIDE LL+ E LT EE RN+ + L + H
Sbjct: 630 FELDMNGKKMEWEAVVKIPFIDEDRLLKAMASKEHLLTPEEKARNNFGVTLKFTH 684
>gi|299749174|ref|XP_001838563.2| exonuclease II [Coprinopsis cinerea okayama7#130]
gi|298408317|gb|EAU83256.2| exonuclease II [Coprinopsis cinerea okayama7#130]
Length = 1468
Score = 296 bits (759), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 153/358 (42%), Positives = 215/358 (60%), Gaps = 42/358 (11%)
Query: 54 LDMNGIIHPCFHPDGKPAP--TSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAK 111
D NGIIH C HP+ + A S + +F SIF Y+DH+F ++P+KL ++A+DGVAPRAK
Sbjct: 61 FDFNGIIHNCSHPNDEDAHFRLSEEQIFTSIFAYVDHLFEKIKPKKLFFMAVDGVAPRAK 120
Query: 112 MNQQRTRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVL 171
MNQQR+RRFR AK+A E + ER ++ E + DSN ITPGT FMA L
Sbjct: 121 MNQQRSRRFRTAKEAKEVREKAERRGEKLPEE----------KAFDSNCITPGTPFMARL 170
Query: 172 SAALQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLY 231
SA L+YFI ++ + W+ +V+LS VPGEGEHKIM YIRL R P ++PN RHCLY
Sbjct: 171 SAQLRYFINKKITEDSNWRSVEVVLSGHEVPGEGEHKIMEYIRLSRAQPDYNPNVRHCLY 230
Query: 232 GLDADLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNG 291
GLDADLIML L +H+ HF +LRE + Q++K
Sbjct: 231 GLDADLIMLGLLSHDPHFCLLREEVKFGPQRKKG-------------------------- 264
Query: 292 VDDTPIHKKKYQFLNIWVLREYLQYEL-DIPNP-PFPINFERIVDDFVFLCFFVGNDFLP 349
+ + + L++ ++REYL E DI + PFP N ER++DDF+ L FVGNDFLP
Sbjct: 265 --NQSLESTNFYLLHLSLMREYLDLEFRDIEHVLPFPYNLERVIDDFILLAVFVGNDFLP 322
Query: 350 HMPTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQK 407
++P L I E + L VY++ + GY+ ++G + + R++ + +AV+E +IF+K
Sbjct: 323 NLPDLHIHENGLEKLFDVYKKALPGLNGYINESGTINVQRLQVVLDEMAVWEREIFEK 380
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 85/175 (48%), Positives = 114/175 (65%), Gaps = 6/175 (3%)
Query: 451 YKERYYADKFEIS--NPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPF 508
+K YY +K EIS +P+E+ D+V +YVEGL WV YYY V SW WFY YHYAP
Sbjct: 550 WKRSYYREKLEISYDDPKEMG----DLVYRYVEGLQWVMHYYYSGVASWGWFYNYHYAPR 605
Query: 509 ASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPD 568
SDL+++ + F LG+PF+P++QLMG LP AS +P Y++LM DP+SPI FYP +
Sbjct: 606 ISDLRNVDQMTFNFELGKPFKPYEQLMGVLPVASKDHIPLAYQDLMYDPNSPILDFYPLE 665
Query: 569 FQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVH 623
F+ D+NGK+ W+ VVK+PFIDE+ LL+ E LT EE RN+ + H
Sbjct: 666 FESDLNGKKQDWEAVVKIPFIDEERLLKAMASREHRLTPEERQRNTWGTSTKFSH 720
>gi|413932822|gb|AFW67373.1| hypothetical protein ZEAMMB73_239358 [Zea mays]
Length = 541
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 142/217 (65%), Positives = 166/217 (76%)
Query: 476 VLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLM 535
V KYVEGLCWV RYYYQ VCSWQWFYPYHYAPFASDLK L++LEITFFLG+PF+PFDQLM
Sbjct: 18 VQKYVEGLCWVMRYYYQGVCSWQWFYPYHYAPFASDLKGLAELEITFFLGQPFKPFDQLM 77
Query: 536 GTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLL 595
GTLPAASS+ALP+ Y +LM+DP SP+ FYP DF+IDMNGKRFAWQGV KLPFIDE+ LL
Sbjct: 78 GTLPAASSNALPKYYGDLMSDPDSPLKSFYPKDFEIDMNGKRFAWQGVAKLPFIDERRLL 137
Query: 596 RQTKKLEVFLTEEELFRNSVMLDLLYVHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVN 655
+T+KLE LTEEE FRN MLD++YV HPL QI Q Y+ L D + I+
Sbjct: 138 AETRKLEDTLTEEEKFRNRTMLDIIYVRDTHPLITQIIFLYQNYYHLSRTDPYVIPIEPA 197
Query: 656 ASGGMNGYIWLCERNGLRSIIPSPVKGLPDIERNQAM 692
ASGGMNG++ L ERN + SPVKG I +N+ +
Sbjct: 198 ASGGMNGFLCLSERNWYSVTVTSPVKGFNGIAQNRVL 234
>gi|156845531|ref|XP_001645656.1| hypothetical protein Kpol_541p40 [Vanderwaltozyma polyspora DSM
70294]
gi|156116322|gb|EDO17798.1| hypothetical protein Kpol_541p40 [Vanderwaltozyma polyspora DSM
70294]
Length = 1521
Score = 296 bits (758), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 156/412 (37%), Positives = 241/412 (58%), Gaps = 59/412 (14%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MG+P F+R++++R+P +I+ ++E D Q+ EFDNLYLDMN I
Sbjct: 1 MGIPKFFRYISERWP-TILQLIEND-QIP------------------EFDNLYLDMNSIF 40
Query: 61 HPCFHP---DGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRT 117
H C H D S ++VF++IF+YIDH+F ++P+K Y+AIDGVAPRAKMNQQR+
Sbjct: 41 HNCTHGNDIDSTKRRLSEEEVFQNIFNYIDHLFNTIKPKKKFYMAIDGVAPRAKMNQQRS 100
Query: 118 RRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQY 177
RRFR+A DA A ++K E +L K E D+N ITPGT+FMA L+ ++Y
Sbjct: 101 RRFRSAMDAENA------MKKAIENGDEL----PKGEPFDTNSITPGTEFMAKLTKNIKY 150
Query: 178 FIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADL 237
FI +++ W+ ++I S VPGEGEHKIM +IR R+L +DPNTRHC+YGLDADL
Sbjct: 151 FIHNKISSDSNWRNIEIIFSGHEVPGEGEHKIMDFIRSIRSLDTYDPNTRHCIYGLDADL 210
Query: 238 IMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPI 297
IML L+TH+ HF++LRE + Q+ N + +
Sbjct: 211 IMLGLSTHDPHFALLREEVRFGNQRNSS------------------------NNSTLSAL 246
Query: 298 HKKKYQFLNIWVLREYLQYELD--IPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLE 355
K+ + L++ +LR+YL E F +FE+++DDF+ + F +GNDFLP++P L
Sbjct: 247 DKQNFYLLHLSLLRQYLNLEFKEVADGINFKYDFEKVLDDFILIMFVIGNDFLPNLPDLH 306
Query: 356 IREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQK 407
+ +GA +++ ++ + G++ + G++ L R+ ++ ++ +E F+K
Sbjct: 307 LNKGAFPVILQTFKEALLHLDGHINENGKINLQRLSVWLNYLSQFELMNFEK 358
Score = 125 bits (315), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 65/144 (45%), Positives = 81/144 (56%)
Query: 479 YVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTL 538
YVEGL WV YYY+ SW W+Y YHYAP SDL D +F L PF PF+QLM L
Sbjct: 580 YVEGLQWVLYYYYRGCPSWNWYYKYHYAPRISDLTRGLDQTTSFDLSNPFTPFEQLMAVL 639
Query: 539 PAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQT 598
P S + +P R LM + SPI YP + ++D NGK W+ VV LPF+DE L+
Sbjct: 640 PERSKNLIPPVLRPLMYEEISPILDLYPNEVELDKNGKTADWEAVVLLPFVDENRLIDAM 699
Query: 599 KKLEVFLTEEELFRNSVMLDLLYV 622
K L+ EE RN DL ++
Sbjct: 700 KPHLAKLSPEEKERNQFGKDLTFM 723
>gi|119183089|ref|XP_001242618.1| hypothetical protein CIMG_06514 [Coccidioides immitis RS]
gi|392865522|gb|EAS31317.2| exonuclease Kem1 [Coccidioides immitis RS]
Length = 1445
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 181/460 (39%), Positives = 253/460 (55%), Gaps = 95/460 (20%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP F+RWL++RYP +I ++ E+ EFD LYLDMNGII
Sbjct: 1 MGVPKFFRWLSERYP-AISQLIAEN-------------------RIPEFDCLYLDMNGII 40
Query: 61 HPCFHPDGKPAPT---SYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRT 117
H C H D +PT + D +F +IF+YI+H+F ++P+KL ++AIDGVAPRAKMNQQR
Sbjct: 41 HNCTHKDSD-SPTFRMTEDKMFIAIFNYIEHLFGKIKPKKLFFMAIDGVAPRAKMNQQRA 99
Query: 118 RRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQY 177
RRFR A DA A+ E+ +R+ E KE P DSN ITPGT+FMA L+ L+Y
Sbjct: 100 RRFRTALDAEIAK--EKAIREGIE------MPKEDP--FDSNCITPGTEFMAKLTKQLKY 149
Query: 178 FIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADL 237
FI ++++ WQ +VILS VPGEGEHKIM YIR + P +DPN RHCLYGLDADL
Sbjct: 150 FINKKVSEDAEWQGVEVILSGHEVPGEGEHKIMEYIRQAKAQPDYDPNVRHCLYGLDADL 209
Query: 238 IMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPI 297
IML L +H+ HF +LRE +T Q +K +
Sbjct: 210 IMLGLLSHDPHFCLLREEVTFGRQNQKKV----------------------------KEL 241
Query: 298 HKKKYQFLNIWVLREY-------------LQYELDIPNPPFPINFERIVDDFVFLCFFVG 344
+ + L++ ++REY LQ+E D+ ER++DDF+ + FFVG
Sbjct: 242 EHQNFYLLHLCIVREYLELEFQELEQEGALQFEFDM---------ERVIDDFILMAFFVG 292
Query: 345 NDFLPHMPTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQI 404
NDFLP++P L I EGA+ + VY+ + GY+ + G + L+R+ + S+ E +
Sbjct: 293 NDFLPNLPNLHINEGALAWMFKVYKEVLPKLDGYINERGRINLNRLGVLLDSLGDVEFRF 352
Query: 405 FQKRTRIQQAYEYNEAMKLN---ARRESSEELLQAPVAVA 441
F+ EY+++ L +R E E+L P A+
Sbjct: 353 FEA--------EYSDSRWLKSKLSRGEEKPEILDDPKALT 384
Score = 165 bits (417), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 82/175 (46%), Positives = 107/175 (61%), Gaps = 6/175 (3%)
Query: 451 YKERYYADKFE--ISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPF 508
+K +YY KF N EE+ K+ ++ YV+GL WV YYY+ V SW WFY YHY+P
Sbjct: 514 WKNKYYEGKFGWGTDNDEEMRKLTEN----YVQGLQWVLYYYYRGVASWPWFYRYHYSPM 569
Query: 509 ASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPD 568
SD+K ++ F LG+PF PF QLMG LP S +P+ Y LM P SPI FYP D
Sbjct: 570 ISDVKRGLGADMDFKLGQPFFPFQQLMGVLPDRSKKIVPQAYHELMISPDSPIIDFYPRD 629
Query: 569 FQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVH 623
F++DMNGK+ W+ VVK+PFI+E LL+ E LT EE RN+ + L + H
Sbjct: 630 FELDMNGKKMEWEAVVKIPFINEDRLLKAMASKEHLLTPEEKARNNFGVTLKFTH 684
>gi|239612327|gb|EEQ89314.1| exonuclease Kem1 [Ajellomyces dermatitidis ER-3]
Length = 1440
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 172/450 (38%), Positives = 253/450 (56%), Gaps = 75/450 (16%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP F+RW+++RYP +I ++ E+ EFD LYLDMNGII
Sbjct: 1 MGVPKFFRWMSERYP-AISQLIAEN-------------------RIPEFDCLYLDMNGII 40
Query: 61 HPCFHPDGKPAPT---SYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRT 117
H C H D +PT + D +F +IF+YI+H++ ++P+KL ++AIDGVAPRAKMNQQR
Sbjct: 41 HNCTHKDSD-SPTFRMTEDKMFIAIFNYIEHLYGKIKPKKLFFMAIDGVAPRAKMNQQRA 99
Query: 118 RRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQY 177
RRFR A DA A+ E+A K K E DSN ITPGT+FMA L+ L+Y
Sbjct: 100 RRFRTALDAEVAK----------EKAIKQGVEMPKEEAFDSNCITPGTEFMAKLTQQLKY 149
Query: 178 FIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADL 237
FI ++++ WQ +++LS VPGEGEHKIM YIR + PG+ P+ RHCLYGLDADL
Sbjct: 150 FINKKVSEDVEWQGVEIVLSGHEVPGEGEHKIMEYIRQSKAQPGYHPDVRHCLYGLDADL 209
Query: 238 IMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPI 297
IML L +H+ HF +LRE +T Q +K +
Sbjct: 210 IMLGLLSHDPHFCLLREEVTFGRQSQK----------------------------KSKEL 241
Query: 298 HKKKYQFLNIWVLREYLQYELDIPNPP----FPINFERIVDDFVFLCFFVGNDFLPHMPT 353
+ + +++ ++REYL+ E FP + ER++DDF+ + FFVGNDFLP++P
Sbjct: 242 EHQNFYLMHLCMVREYLELEFQELEEADALQFPFDLERVIDDFILMAFFVGNDFLPNLPN 301
Query: 354 LEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQ 413
L I EGA+ + +Y++ +GGY+ + G + L+R+ + S++ E + F+
Sbjct: 302 LHINEGALAWMFKIYKQVLPKLGGYINEQGTINLERLGVLLDSLSDVEFRFFEA------ 355
Query: 414 AYEYNEAMKLNARRESSE-ELLQAPVAVAD 442
EY++A + ++ + E E ++P D
Sbjct: 356 --EYSDARWIKSKMKGQEPENSESPANAKD 383
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 92/217 (42%), Positives = 124/217 (57%), Gaps = 16/217 (7%)
Query: 410 RIQQAYEYNEAMKLNAR-RESSEELLQAPVAVADTVKLGEPGYKERYYADKFE--ISNPE 466
R+ + YE NA+ +E++ E Q +K E +K YY KF + N E
Sbjct: 484 RVMKRYE-------NAKVKETTAEEAQQAAEKKYELKFQE--WKNDYYKSKFGWGLDNHE 534
Query: 467 EIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDLEITFFLGE 526
E+ K+ ++ YV+GL WV YYY+ V SW WFY YHY+P SD+K ++ F LG+
Sbjct: 535 EMRKLTEN----YVQGLQWVLYYYYRGVASWPWFYQYHYSPMISDVKFGLKADMNFDLGQ 590
Query: 527 PFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKL 586
PFRPF+QLMG LP S +P + LMT P SPI FYP DF++DMNGK+ W+ VVK+
Sbjct: 591 PFRPFEQLMGVLPDRSKQIVPAAFHELMTSPESPIIDFYPRDFELDMNGKKMEWEAVVKI 650
Query: 587 PFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVH 623
PFIDEK LL + LT E RN + L + +
Sbjct: 651 PFIDEKRLLGAMATKQHLLTPAERARNEFGVTLKFTY 687
>gi|83317292|ref|XP_731098.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23491026|gb|EAA22663.1| Drosophila melanogaster CG10354 gene product-related [Plasmodium
yoelii yoelii]
Length = 1286
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 189/481 (39%), Positives = 258/481 (53%), Gaps = 70/481 (14%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVD-----------GE--------GVARPVDVS- 40
MGVP FY+WL RYP I V E D GE D +
Sbjct: 1 MGVPTFYKWLVTRYP-KIAKAVYETRDNDVYIRRARINENGEFYKVCDLGAYVNNTDENH 59
Query: 41 -KPNPNGMEFDNLYLDMNGIIHPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLL 99
N NG FDN+YLDMNGIIH C H DG + +++F +IF YI+ +F ++ P+KLL
Sbjct: 60 CSDNVNGY-FDNMYLDMNGIIHLCSHGDGSKKVKTDEEIFLNIFLYIERLFDIIEPQKLL 118
Query: 100 YLAIDGVAPRAKMNQQRTRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEK-PETC-- 156
Y+AIDGVAP+AKMNQQR+RRF++ A+E E R E K LS P+
Sbjct: 119 YMAIDGVAPKAKMNQQRSRRFKSIL-ASEIEK-----RAYIELRNKFLSENRNVPDEFHH 172
Query: 157 -DSNVITPGTQFMAVLSAALQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRL 215
DSN+ITPGTQFM LS AL+YFI+ ++ W+ VI SDANV GEGEHKI ++I+
Sbjct: 173 WDSNIITPGTQFMHELSVALKYFIEHKITNDEKWKKIVVIFSDANVCGEGEHKIYNFIKS 232
Query: 216 QRNLPGFDPNTRHCLYGLDADLIMLSLATHEIHFSILREVITL-PGQQEKCFVCGQ-VGH 273
QR G+DPNTRH ++G+DADLIMLSLA+HE +F ILRE+I L P ++ K V + VG
Sbjct: 233 QRAQKGYDPNTRHVIHGMDADLIMLSLASHEPYFYILREIINLDPKEENKPQVKDKYVGV 292
Query: 274 LAAE-----------------------------CHGKPGDNPADWNGVDDTPIHKKKY-- 302
+ C+ N A+ N I+ + +
Sbjct: 293 FKGKGDLQYCTKFLRNNNSTTIDGNNNKGKKKYCNKYDDRNYANINISSTCSINYENWNE 352
Query: 303 -QFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGAI 361
Q L++ +LREYL + N ER +DDF+F+CF GNDFLPH+P++ I G+I
Sbjct: 353 LQILDLSILREYLYKDFFFDT---KYNLERCIDDFIFICFLCGNDFLPHLPSISIASGSI 409
Query: 362 NLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYEYNEAM 421
+ L+ +Y++ +G YL + G + KFI +A E + F + ++ E E
Sbjct: 410 DQLLLLYQKVLPVLGDYLINEGSMNFQSFIKFISFIAEVERETFVSQYDFKKKREKRELQ 469
Query: 422 K 422
K
Sbjct: 470 K 470
Score = 166 bits (419), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 79/188 (42%), Positives = 119/188 (63%), Gaps = 1/188 (0%)
Query: 452 KERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASD 511
+ RYY KF + + +D+ ++VV KY+EGL WV YY+Q+ W W+YPY+YAP +SD
Sbjct: 701 RTRYYKSKFHLDESDNVDEFVQEVVYKYIEGLAWVLCYYFQECPMWHWYYPYYYAPLSSD 760
Query: 512 LKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQI 571
L + D+ I+F EP PF+QL+ LP+ SS LP+ YR LM SPI FYP F+
Sbjct: 761 LL-IKDINISFEKDEPLLPFEQLLCVLPSNSSHCLPKMYRELMLKNESPIVDFYPKTFKE 819
Query: 572 DMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVHPQHPLYQQ 631
+ NGK+F +Q +V LPF++++ ++R + L+ LT+EE RN L+ +Y+ H L ++
Sbjct: 820 EENGKKFKYQWIVLLPFVEKERIIRFARNLDDTLTDEEKKRNRRGLNKIYMSSTHTLSKK 879
Query: 632 ITLYCQLY 639
IT + Y
Sbjct: 880 ITTSMRTY 887
>gi|55726904|emb|CAH90211.1| hypothetical protein [Pongo abelii]
Length = 402
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 166/411 (40%), Positives = 239/411 (58%), Gaps = 62/411 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP FYRW+++RYP + +VV+E Q+ EFDNLYLDMNGII
Sbjct: 1 MGVPKFYRWISERYP-CLSEVVKEH-QIP------------------EFDNLYLDMNGII 40
Query: 61 HPCFHP--DGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C HP D S D +F IF Y++ +F +++PRK+ ++A+DGVAPRAKMNQQR R
Sbjct: 41 HQCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RFR+AK+A E++++K E+ G+ L + + DSN ITPGT+FMA L L+YF
Sbjct: 101 RFRSAKEA------EDKIKKAIEK-GETLPTEAR---FDSNCITPGTEFMARLHEHLKYF 150
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
+ +++ WQ + S PGEGEHKIM +IR ++ P DPNTRHCLYGLDADLI
Sbjct: 151 VNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLI 210
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
ML L +HE HF +LRE + G++ + VC ++T H
Sbjct: 211 MLGLTSHEAHFPLLREEVRFGGKKTQR-VCAP----------------------EETTFH 247
Query: 299 KKKYQFLNIWVLREYLQYELDI--PNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEI 356
L++ ++REY+ YE + F + ERI+DD++ + F VGNDF+PH+P L I
Sbjct: 248 -----LLHLSLMREYIDYEFSLLKEKITFKYDIERIIDDWILMGFLVGNDFIPHLPHLHI 302
Query: 357 REGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQK 407
A+ LL Y +GGY+ ++G + L R EK++ ++ ++ + F +
Sbjct: 303 NHDALPLLYGTYITILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSE 353
>gi|255715011|ref|XP_002553787.1| KLTH0E07062p [Lachancea thermotolerans]
gi|238935169|emb|CAR23350.1| KLTH0E07062p [Lachancea thermotolerans CBS 6340]
Length = 1496
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 162/411 (39%), Positives = 233/411 (56%), Gaps = 64/411 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MG+P F+R++++R+P+ +DG + EFDNLYLDMN I+
Sbjct: 1 MGIPKFFRYISERWPMI-------SQLIDGTQIP-------------EFDNLYLDMNSIL 40
Query: 61 HPCFHP--DGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C H D S ++VF IF YIDH+F + P++ Y+AIDGVAPRAKMNQQR R
Sbjct: 41 HTCTHANDDDVKKRMSEEEVFSKIFAYIDHLFHTIGPKQTFYMAIDGVAPRAKMNQQRAR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RFR A DA +A L K + ++ K E DSN ITPGT+FMA L+ L+YF
Sbjct: 101 RFRTAMDAEKA------LEKAIRDGEEI----PKGEPFDSNSITPGTEFMAKLTENLKYF 150
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
I +++ W T +ILS VPGEGEHKIM YIR R P ++ NTRHC+YGLDADLI
Sbjct: 151 IHDKISNDSAWSSTSIILSGHEVPGEGEHKIMEYIRRMRAQPDYNANTRHCIYGLDADLI 210
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
ML L+TH+ HF++LRE +T G+++K P+
Sbjct: 211 MLGLSTHDPHFALLREEVTF-GRRQKA-----------------------------APLE 240
Query: 299 KKKYQFLNIWVLREYLQYELD--IPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEI 356
+ + L+I +LREYL+ E + F +FERI+DDF+ + F +GNDFLP++P L +
Sbjct: 241 YQNFYLLHISMLREYLELEFREIADDLQFEYDFERILDDFILVMFVIGNDFLPNLPDLHL 300
Query: 357 REGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQK 407
+GA +L+ ++ GY+ + G + L R + ++Q ++ +E F++
Sbjct: 301 NKGAFPVLLQTFKEALKHTDGYINEQGTINLSRFQVWLQYLSEFEMMNFER 351
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 81/176 (46%), Positives = 107/176 (60%), Gaps = 3/176 (1%)
Query: 451 YKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFAS 510
++++YY +K S +E DK++ ++ YVEGL WV YYY+ SW W+Y YHYAP S
Sbjct: 510 WRDQYYREKLGFSYYDE-DKLR-ELTETYVEGLQWVLFYYYRGCQSWSWYYKYHYAPRIS 567
Query: 511 DLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQ 570
D+ + I F LG+PFRPF QLM LP S + +P YR LM DP SPI FYP + +
Sbjct: 568 DVYKGLNQSIKFNLGKPFRPFQQLMAVLPERSKNLIPTVYRPLMYDPKSPIADFYPSEVE 627
Query: 571 IDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYV-HPQ 625
+D NGK W+ VVKL F+DE L+ + LT EE RNS DL +V +PQ
Sbjct: 628 LDKNGKTADWEAVVKLSFVDENRLIEAMAPYDEKLTPEEKRRNSFGTDLAFVFNPQ 683
>gi|396497754|ref|XP_003845052.1| similar to 5'-3' exoribonuclease [Leptosphaeria maculans JN3]
gi|312221633|emb|CBY01573.1| similar to 5'-3' exoribonuclease [Leptosphaeria maculans JN3]
Length = 1425
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 168/412 (40%), Positives = 238/412 (57%), Gaps = 64/412 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP F+RW+++RYP I ++ E+ EFD LYLDMNGII
Sbjct: 1 MGVPKFFRWMSERYP-GISQLIAEN-------------------RIPEFDCLYLDMNGII 40
Query: 61 HPCFHPDGKPAPT--SYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C H D T S D +F SIF+YI+H+F ++P++L+++AIDGVAPRAKMNQQR R
Sbjct: 41 HNCTHNDNDSVTTRKSEDKMFISIFNYIEHLFGKIKPKQLIFMAIDGVAPRAKMNQQRAR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RFR A DA +A E+ +R+ E + E DSN ITPGT FMA L+ L+YF
Sbjct: 101 RFRTALDAEKAR--EKAIREGVEMPTE--------EAFDSNCITPGTAFMAKLTQQLKYF 150
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
I ++++ WQ +V+LS VPGEGEHKIM YIR + P +DPN RHCLYGLDADLI
Sbjct: 151 INKKISEDLDWQGVEVVLSGHEVPGEGEHKIMEYIRQAKAQPDYDPNRRHCLYGLDADLI 210
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
ML L +H+ HFS+LRE +T G+Q + +
Sbjct: 211 MLGLLSHDPHFSLLREEVTF-GRQSQT---------------------------KSKELE 242
Query: 299 KKKYQFLNIWVLREYLQYELDIPNPP----FPINFERIVDDFVFLCFFVGNDFLPHMPTL 354
+ + +++ ++REYL+ E P FP + ER++DDF+ + FFVGNDFLP++P L
Sbjct: 243 HQNFYLMHLCIVREYLELEFQELEEPGALSFPFDMERVIDDFILMAFFVGNDFLPNLPHL 302
Query: 355 EIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQ 406
I EGA+ L+ +VY+ GY+ + G + ++R+ + ++ E + F+
Sbjct: 303 HINEGALALMFNVYKTVLPKAKGYINEEGVINMERLALLLDELSQIEYRHFE 354
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 83/176 (47%), Positives = 106/176 (60%), Gaps = 6/176 (3%)
Query: 450 GYKERYYADKFEI--SNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAP 507
+K YY KF+ SN EE+ K+ ++ YV+GL WV YYY+ V SW W+Y YHY+P
Sbjct: 511 AWKNDYYKSKFDWDRSNEEELRKLTEN----YVQGLQWVLYYYYRGVASWPWYYGYHYSP 566
Query: 508 FASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPP 567
SD+K +I F LG+PF+PF QLMG LP S S +PE Y LMT SPI FYP
Sbjct: 567 MISDVKRGLKADINFKLGQPFKPFQQLMGVLPDRSKSIVPEAYHPLMTSEDSPIIDFYPR 626
Query: 568 DFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVH 623
DF +DMNGK+ W+ VVK+PFI E LL E LT +E RN + L + +
Sbjct: 627 DFTLDMNGKKQDWEAVVKIPFIQEDRLLSAMATKEHNLTADEKSRNGFGVSLKFTY 682
>gi|310794358|gb|EFQ29819.1| XRN 5'-3' exonuclease [Glomerella graminicola M1.001]
Length = 1407
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 165/432 (38%), Positives = 240/432 (55%), Gaps = 65/432 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP F+RWL++RYP +I ++ E+ EFD LYLDMNGII
Sbjct: 1 MGVPKFFRWLSERYP-AISQLIAEN-------------------RIPEFDCLYLDMNGII 40
Query: 61 HPCFHPDGKPAPT---SYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRT 117
H C H D T S +++F IF+YI+H+F ++P++L ++AIDGVAPRAKMNQQR
Sbjct: 41 HNCTHKDTGEDTTFRLSEEEMFIRIFNYIEHLFGKIKPKQLFFMAIDGVAPRAKMNQQRA 100
Query: 118 RRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQY 177
RRFR A D +A K E ++ KE P DSN ITPGT+FMA L+ L+Y
Sbjct: 101 RRFRTALDTEKAR------DKAISEGVEM--PKEPP--FDSNCITPGTEFMAKLTQQLKY 150
Query: 178 FIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADL 237
F+ ++++ WQ +++LS VPGEGEHKIM YIR + P +D N RHCLYGLDADL
Sbjct: 151 FVNKKVSEDADWQGCEIVLSGHEVPGEGEHKIMEYIRNAKAQPDYDSNVRHCLYGLDADL 210
Query: 238 IMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPI 297
IML L +H+ HF +LRE +T G+V +
Sbjct: 211 IMLGLLSHDPHFCLLREEVTF----------GRVSKAKTR------------------EL 242
Query: 298 HKKKYQFLNIWVLREYLQYELDIPNPP----FPINFERIVDDFVFLCFFVGNDFLPHMPT 353
+ + L++ ++REYL+ E P FP + ER++DDF+ + FFVGNDFLP++P
Sbjct: 243 EHQNFYLLHLCIVREYLELEFQELKEPGRLSFPFDLERVIDDFILMAFFVGNDFLPNLPR 302
Query: 354 LEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQ 413
L I EGA+ + +Y+ GY+ + G + L R+++ + +A E F+ ++
Sbjct: 303 LHINEGALAAMFRIYKSVLPLGDGYINEGGVINLPRLQRLLNELAKDETNQFEHDVSDEK 362
Query: 414 AYEYNEAMKLNA 425
++ + ++ N
Sbjct: 363 WFQSKKLLESNG 374
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 82/174 (47%), Positives = 111/174 (63%)
Query: 450 GYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFA 509
G+K +YY KF PE+ + + YV+GL WV YYY+ + SW WFY YHY+P
Sbjct: 504 GWKTKYYLQKFPEWAPEQYETELTKLCENYVQGLQWVLYYYYRGIASWPWFYQYHYSPLT 563
Query: 510 SDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDF 569
SD+ ++ F LG+PFRPF+QLMG LP S S +PE Y +LMT+P+SPIY FYP DF
Sbjct: 564 SDVTRGLGADLNFKLGQPFRPFEQLMGVLPDRSKSIVPEVYWDLMTNPNSPIYDFYPRDF 623
Query: 570 QIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVH 623
++DMNGK+ W+ VVK+PFIDEK LL + L+E + RN + L + +
Sbjct: 624 ELDMNGKKMEWEAVVKIPFIDEKRLLSAMEPKNKLLSEGQKERNGFGVALKFTY 677
>gi|322812519|pdb|3PIE|A Chain A, Crystal Structure Of The 5'->3' Exoribonuclease Xrn1,
E178q Mutant
gi|322812520|pdb|3PIE|B Chain B, Crystal Structure Of The 5'->3' Exoribonuclease Xrn1,
E178q Mutant
gi|322812521|pdb|3PIE|C Chain C, Crystal Structure Of The 5'->3' Exoribonuclease Xrn1,
E178q Mutant
gi|322812522|pdb|3PIE|D Chain D, Crystal Structure Of The 5'->3' Exoribonuclease Xrn1,
E178q Mutant
gi|322812523|pdb|3PIF|A Chain A, Crystal Structure Of The 5'->3' Exoribonuclease Xrn1,
E178q Mutant In Complex With Manganese
gi|322812524|pdb|3PIF|B Chain B, Crystal Structure Of The 5'->3' Exoribonuclease Xrn1,
E178q Mutant In Complex With Manganese
gi|322812525|pdb|3PIF|C Chain C, Crystal Structure Of The 5'->3' Exoribonuclease Xrn1,
E178q Mutant In Complex With Manganese
gi|322812526|pdb|3PIF|D Chain D, Crystal Structure Of The 5'->3' Exoribonuclease Xrn1,
E178q Mutant In Complex With Manganese
Length = 1155
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 159/412 (38%), Positives = 233/412 (56%), Gaps = 63/412 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MG+P F+ ++++R+P + +DG + EFDNLYLDMN I+
Sbjct: 1 MGIPKFFHFISERWP-------QISQLIDGSQIP-------------EFDNLYLDMNSIL 40
Query: 61 HPCFHPDGKPAPT--SYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C H DG + S ++V+ IF YIDH+F ++P++ Y+AIDGVAPRAKMNQQR R
Sbjct: 41 HNCTHGDGSEVNSRLSEEEVYSKIFSYIDHLFHTIKPKQTFYMAIDGVAPRAKMNQQRAR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RFR A DA +A L+K E +L K E DSN ITPGT+FMA L+ L+YF
Sbjct: 101 RFRTAMDAEKA------LQKAIENGDEL----PKGEPFDSNAITPGTEFMAKLTENLKYF 150
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
I ++ WQ KVI S VPGEG+HKIM YIR R ++PNTRHC+YGLDADLI
Sbjct: 151 IHDKITNDTRWQNVKVIFSGHEVPGEGQHKIMDYIRAIRAQEDYNPNTRHCIYGLDADLI 210
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
+L L+TH+ HF +LRE +T + +
Sbjct: 211 ILGLSTHDHHFCLLREEVTFGKRSSSV-----------------------------KTLE 241
Query: 299 KKKYQFLNIWVLREYLQYELD--IPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEI 356
+ + L++ +LREYL E + + F +FER++DDF+F+ F +GNDFLP++P L +
Sbjct: 242 TQNFFLLHLSILREYLALEFEEITDSVQFEYDFERVLDDFIFVLFTIGNDFLPNLPDLHL 301
Query: 357 REGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKR 408
++GA +L+ ++ M GY+ + G++ L R +++ ++ +E F+K+
Sbjct: 302 KKGAFPVLLQTFKEALQHMDGYINEQGKINLARFSIWLKYLSDFEYLNFEKK 353
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 75/178 (42%), Positives = 107/178 (60%), Gaps = 7/178 (3%)
Query: 451 YKERYYADK--FEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPF 508
+K++YY DK F I++ + + K++ YV GL WV YYY+ SW W+Y YHYAP
Sbjct: 491 WKDQYYKDKLDFSINDTDSL----KEMTENYVGGLQWVLYYYYRGCPSWSWYYRYHYAPR 546
Query: 509 ASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPD 568
SD+ D I F G+PF+PF QLM LP S + +P YR LM D SPI FYP +
Sbjct: 547 ISDVIKGIDQNIEFHKGQPFKPFQQLMAVLPERSKNLIPVVYRPLMYDEHSPILDFYPNE 606
Query: 569 FQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYV-HPQ 625
++D+NGK W+ VVK+ F+D+K L+ + L+ +E RNS DL+++ +PQ
Sbjct: 607 VELDLNGKTADWEAVVKISFVDQKRLVEAMAPYDAKLSPDEKKRNSFGTDLIFIFNPQ 664
>gi|255955773|ref|XP_002568639.1| Pc21g16320 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211590350|emb|CAP96529.1| Pc21g16320 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 1390
Score = 296 bits (757), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 168/413 (40%), Positives = 241/413 (58%), Gaps = 66/413 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP F+RWL++RYP + ++ D ++ EFD+LYLDMNGII
Sbjct: 1 MGVPKFFRWLSERYP--AISMLIADSRIP------------------EFDSLYLDMNGII 40
Query: 61 HPCFHPDGKPAPT---SYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRT 117
H C H D +PT + D +F +IF+YI+H+F ++P+KL Y+A+DGVAPRAKMNQQR
Sbjct: 41 HNCTHSDSD-SPTFRMTEDQMFIAIFNYIEHLFGKIKPKKLFYMAVDGVAPRAKMNQQRA 99
Query: 118 RRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQY 177
RRFR A DA A+ E+ +++ E KE P DSN ITPGT+FM L+ L+Y
Sbjct: 100 RRFRTALDAENAK--EKAIQQGLE------MPKEDP--FDSNCITPGTEFMQKLTKQLKY 149
Query: 178 FIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADL 237
FI ++++ WQ +++LS VPGEGEHKIM YIR + P ++ N RHCLYGLDADL
Sbjct: 150 FINKKISEDTDWQGVEIVLSGHEVPGEGEHKIMEYIRCSKAQPDYESNVRHCLYGLDADL 209
Query: 238 IMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPI 297
IML L +H+ HF +LRE +T Q K KP + +
Sbjct: 210 IMLGLLSHDPHFCLLREEVTFGRQVSK----------------KPKE------------L 241
Query: 298 HKKKYQFLNIWVLREYLQYELDIPNPP----FPINFERIVDDFVFLCFFVGNDFLPHMPT 353
+ + L++ V+REYL+ E FP + ER++DDF+ + FFVGNDFLP++P
Sbjct: 242 EHQNFYLLHLSVVREYLELEFQELEQEGVLDFPFDMERVIDDFILMAFFVGNDFLPNLPN 301
Query: 354 LEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQ 406
L I EGA+ L+ +Y+ MGGY+ + G + + R+ + +++ E + F+
Sbjct: 302 LHINEGALALMFKLYKEVLPKMGGYINEQGVINVQRLGMLVTALSAVEYRFFE 354
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 85/165 (51%), Positives = 108/165 (65%), Gaps = 6/165 (3%)
Query: 451 YKERYYADKFE--ISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPF 508
+K+ YY KF + N EE+ K+ ++ YV+GL WV YYY+ + SW WF+ YHYAP
Sbjct: 506 WKDNYYRTKFGWGLDNKEEMKKLARN----YVQGLQWVLFYYYRGIASWPWFFQYHYAPM 561
Query: 509 ASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPD 568
SD+ D D ++ F LG+PFRPFDQLMG LP S +P Y +LMT P SPIY FYP D
Sbjct: 562 ISDVNDGLDADMNFKLGQPFRPFDQLMGVLPDRSKKIVPTAYWDLMTSPDSPIYDFYPRD 621
Query: 569 FQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRN 613
F +DMNGK+ W+ VVK+PFIDEK LL K E L+ +E RN
Sbjct: 622 FDLDMNGKKMEWEAVVKIPFIDEKRLLDALKTKENQLSADEKARN 666
>gi|327353279|gb|EGE82136.1| exonuclease [Ajellomyces dermatitidis ATCC 18188]
Length = 1440
Score = 295 bits (756), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 172/450 (38%), Positives = 253/450 (56%), Gaps = 75/450 (16%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP F+RW+++RYP +I ++ E+ EFD LYLDMNGII
Sbjct: 1 MGVPKFFRWMSERYP-AISQLIAEN-------------------RIPEFDCLYLDMNGII 40
Query: 61 HPCFHPDGKPAPT---SYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRT 117
H C H D +PT + D +F +IF+YI+H++ ++P+KL ++AIDGVAPRAKMNQQR
Sbjct: 41 HNCTHKDSD-SPTFRMTEDKMFIAIFNYIEHLYGKIKPKKLFFMAIDGVAPRAKMNQQRA 99
Query: 118 RRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQY 177
RRFR A DA A+ E+A K K E DSN ITPGT+FMA L+ L+Y
Sbjct: 100 RRFRTALDAEVAK----------EKAIKQGIEMPKEEAFDSNCITPGTEFMAKLTQQLKY 149
Query: 178 FIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADL 237
FI ++++ WQ +++LS VPGEGEHKIM YIR + PG+ P+ RHCLYGLDADL
Sbjct: 150 FINKKVSEDVEWQGVEIVLSGHEVPGEGEHKIMEYIRQSKAQPGYHPDVRHCLYGLDADL 209
Query: 238 IMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPI 297
IML L +H+ HF +LRE +T Q +K +
Sbjct: 210 IMLGLLSHDPHFCLLREEVTFGRQSQK----------------------------KSKEL 241
Query: 298 HKKKYQFLNIWVLREYLQYELDIPNPP----FPINFERIVDDFVFLCFFVGNDFLPHMPT 353
+ + +++ ++REYL+ E FP + ER++DDF+ + FFVGNDFLP++P
Sbjct: 242 EHQNFYLMHLCMVREYLELEFQELEEADALQFPFDLERVIDDFILMAFFVGNDFLPNLPN 301
Query: 354 LEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQ 413
L I EGA+ + +Y++ +GGY+ + G + L+R+ + S++ E + F+
Sbjct: 302 LHINEGALAWMFKIYKQVLPKLGGYINEQGTINLERLGVLLDSLSDVEFRFFEA------ 355
Query: 414 AYEYNEAMKLNARRESSE-ELLQAPVAVAD 442
EY++A + ++ + E E ++P D
Sbjct: 356 --EYSDARWIKSKMKGQEPENSESPANAKD 383
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 92/217 (42%), Positives = 124/217 (57%), Gaps = 16/217 (7%)
Query: 410 RIQQAYEYNEAMKLNAR-RESSEELLQAPVAVADTVKLGEPGYKERYYADKFE--ISNPE 466
R+ + YE NA+ +E++ E Q +K E +K YY KF + N E
Sbjct: 484 RVMKRYE-------NAKVKETTAEEAQQAAEKKYELKFQE--WKNDYYKSKFGWGLDNHE 534
Query: 467 EIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDLEITFFLGE 526
E+ K+ ++ YV+GL WV YYY+ V SW WFY YHY+P SD+K ++ F LG+
Sbjct: 535 EMRKLTEN----YVQGLQWVLYYYYRGVASWPWFYQYHYSPMISDVKFGLKADMNFDLGQ 590
Query: 527 PFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKL 586
PFRPF+QLMG LP S +P + LMT P SPI FYP DF++DMNGK+ W+ VVK+
Sbjct: 591 PFRPFEQLMGVLPDRSKQIVPAAFHELMTSPESPIIDFYPRDFELDMNGKKMEWEAVVKI 650
Query: 587 PFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVH 623
PFIDEK LL + LT E RN + L + +
Sbjct: 651 PFIDEKRLLGAMATKQHLLTPAERARNEFGVTLKFTY 687
>gi|261202580|ref|XP_002628504.1| exonuclease Kem1 [Ajellomyces dermatitidis SLH14081]
gi|239590601|gb|EEQ73182.1| exonuclease Kem1 [Ajellomyces dermatitidis SLH14081]
Length = 1440
Score = 295 bits (756), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 172/450 (38%), Positives = 253/450 (56%), Gaps = 75/450 (16%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP F+RW+++RYP +I ++ E+ EFD LYLDMNGII
Sbjct: 1 MGVPKFFRWMSERYP-AISQLIAEN-------------------RIPEFDCLYLDMNGII 40
Query: 61 HPCFHPDGKPAPT---SYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRT 117
H C H D +PT + D +F +IF+YI+H++ ++P+KL ++AIDGVAPRAKMNQQR
Sbjct: 41 HNCTHKDSD-SPTFRMTEDKMFIAIFNYIEHLYGKIKPKKLFFMAIDGVAPRAKMNQQRA 99
Query: 118 RRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQY 177
RRFR A DA A+ E+A K K E DSN ITPGT+FMA L+ L+Y
Sbjct: 100 RRFRTALDAEVAK----------EKAIKQGIEMPKEEAFDSNCITPGTEFMAKLTQQLKY 149
Query: 178 FIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADL 237
FI ++++ WQ +++LS VPGEGEHKIM YIR + PG+ P+ RHCLYGLDADL
Sbjct: 150 FINKKVSEDVEWQGVEIVLSGHEVPGEGEHKIMEYIRQSKAQPGYHPDVRHCLYGLDADL 209
Query: 238 IMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPI 297
IML L +H+ HF +LRE +T Q +K +
Sbjct: 210 IMLGLLSHDPHFCLLREEVTFGRQSQK----------------------------KSKEL 241
Query: 298 HKKKYQFLNIWVLREYLQYELDIPNPP----FPINFERIVDDFVFLCFFVGNDFLPHMPT 353
+ + +++ ++REYL+ E FP + ER++DDF+ + FFVGNDFLP++P
Sbjct: 242 EHQNFYLMHLCMVREYLELEFQELEEADALQFPFDLERVIDDFILMAFFVGNDFLPNLPN 301
Query: 354 LEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQ 413
L I EGA+ + +Y++ +GGY+ + G + L+R+ + S++ E + F+
Sbjct: 302 LHINEGALAWMFKIYKQVLPKLGGYINEQGTINLERLGVLLDSLSDVEFRFFEA------ 355
Query: 414 AYEYNEAMKLNARRESSE-ELLQAPVAVAD 442
EY++A + ++ + E E ++P D
Sbjct: 356 --EYSDARWIKSKMKGQEPENSESPANAKD 383
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 92/217 (42%), Positives = 124/217 (57%), Gaps = 16/217 (7%)
Query: 410 RIQQAYEYNEAMKLNAR-RESSEELLQAPVAVADTVKLGEPGYKERYYADKFE--ISNPE 466
R+ + YE NA+ +E++ E Q +K E +K YY KF + N E
Sbjct: 484 RVMKRYE-------NAKVKETTAEEAQQAAEKKYELKFQE--WKNDYYKSKFGWGLDNHE 534
Query: 467 EIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDLEITFFLGE 526
E+ K+ ++ YV+GL WV YYY+ V SW WFY YHY+P SD+K ++ F LG+
Sbjct: 535 EMRKLTEN----YVQGLQWVLYYYYRGVASWPWFYQYHYSPMISDVKFGLKADMNFDLGQ 590
Query: 527 PFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKL 586
PFRPF+QLMG LP S +P + LMT P SPI FYP DF++DMNGK+ W+ VVK+
Sbjct: 591 PFRPFEQLMGVLPDRSKQIVPAAFHELMTSPESPIIDFYPRDFELDMNGKKMEWEAVVKI 650
Query: 587 PFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVH 623
PFIDEK LL + LT E RN + L + +
Sbjct: 651 PFIDEKRLLGAMATKQHLLTPAERARNEFGVTLKFTY 687
>gi|389635811|ref|XP_003715558.1| 5'-3' exoribonuclease 1 [Magnaporthe oryzae 70-15]
gi|351647891|gb|EHA55751.1| 5'-3' exoribonuclease 1 [Magnaporthe oryzae 70-15]
gi|440470232|gb|ELQ39313.1| 5'-3' exoribonuclease 1 [Magnaporthe oryzae Y34]
gi|440485056|gb|ELQ65052.1| 5'-3' exoribonuclease 1 [Magnaporthe oryzae P131]
Length = 1435
Score = 295 bits (755), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 173/438 (39%), Positives = 244/438 (55%), Gaps = 70/438 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP F+RWL++RYP +I ++ E+ EFD LYLDMNGII
Sbjct: 1 MGVPKFFRWLSERYP-AISQLIAEN-------------------RIPEFDCLYLDMNGII 40
Query: 61 HPCFHPDGKPAP--TSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C H D S D++F IF+YI+H+F ++P++L ++AIDGVAPRAKMNQQR R
Sbjct: 41 HNCTHKDTHDTSFRLSEDEMFIRIFNYIEHLFGKIKPKQLFFMAIDGVAPRAKMNQQRAR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RFR A DA A + R +E KE+P DSN ITPGT+FMA LS L+YF
Sbjct: 101 RFRTALDAEVARDKAVREGQEL--------PKEEP--FDSNCITPGTEFMAKLSEQLKYF 150
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
+ ++++ WQ +++LS VPGEGEHKIM YIR + P ++ N RHCLYGLDADLI
Sbjct: 151 VNKKVSEDTEWQGCEIVLSGHEVPGEGEHKIMEYIRNAKAQPDYNHNVRHCLYGLDADLI 210
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
ML L +H+ HF +LRE +T G+Q K +
Sbjct: 211 MLGLLSHDPHFCLLREEVTF-GRQSKS---------------------------QSKELE 242
Query: 299 KKKYQFLNIWVLREYLQYEL-DIPNP---PFPINFERIVDDFVFLCFFVGNDFLPHMPTL 354
+ + L++ ++REYL+ E D+ FP + ER++DDF+ + FFVGNDFLP++P L
Sbjct: 243 HQNFYLLHLCIVREYLELEFQDLKKDGRMTFPFDMERVIDDFILMAFFVGNDFLPNLPHL 302
Query: 355 EIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRT----- 409
I EGA+ L+ +Y+ GY+ + G V L R+ ++ + E + F+
Sbjct: 303 HINEGALALMFRLYKEILPKCDGYINEGGRVNLQRLGLLLEGLGEAERRFFEVDMQNEHW 362
Query: 410 -RIQQAYEYNEAMKLNAR 426
R +Q E +EA + +R
Sbjct: 363 FRSKQQMENSEAAPVKSR 380
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 83/196 (42%), Positives = 122/196 (62%), Gaps = 3/196 (1%)
Query: 428 ESSEELLQAPVAVADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVC 487
++S E +A + V K E +K++YY++KFE + E ++ +++ YV+GL WV
Sbjct: 490 DTSPEEAKAAMEVLYQQKFQE--WKDKYYSEKFEWT-AETKEQGLRELAENYVQGLQWVL 546
Query: 488 RYYYQDVCSWQWFYPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALP 547
YYY+ + SW WFY +HY+P SD+ + ++ F LG+PF+P++QLMG LP S +P
Sbjct: 547 YYYYRGIRSWPWFYKFHYSPMISDVMKGLNADMNFTLGQPFKPYEQLMGVLPDRSKKIVP 606
Query: 548 EKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTE 607
Y LMTDP+SPI FYP DF++DMNGK+ W+ VVK+PFIDEK LL L++
Sbjct: 607 TVYWELMTDPNSPIIDFYPRDFELDMNGKKQEWEAVVKIPFIDEKRLLDGMATKNHLLSD 666
Query: 608 EELFRNSVMLDLLYVH 623
E RN + L + H
Sbjct: 667 VEKSRNGFGVALKFTH 682
>gi|425772513|gb|EKV10914.1| Exonuclease Kem1, putative [Penicillium digitatum PHI26]
Length = 1393
Score = 295 bits (754), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 170/440 (38%), Positives = 248/440 (56%), Gaps = 74/440 (16%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP F+RWL++RYP SI ++ E EFD+LYLDMNGII
Sbjct: 1 MGVPKFFRWLSERYP-SISMLIAES-------------------RIPEFDSLYLDMNGII 40
Query: 61 HPCFHPDGKPAPT---SYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRT 117
H C H D +PT + D +F +IF+YI+H+F ++P+KL Y+A+DGVAPRAKMNQQR
Sbjct: 41 HNCTHSDSD-SPTFRMTEDQMFIAIFNYIEHLFGKIKPKKLFYMAVDGVAPRAKMNQQRA 99
Query: 118 RRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQY 177
RRFR A DA A+ E+ +++ E K + DSN ITPGT+FM L+ L+Y
Sbjct: 100 RRFRTALDAENAK--EKAIQQGLE--------MPKEDAFDSNCITPGTEFMQKLTKQLKY 149
Query: 178 FIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADL 237
FI ++++ WQ +++LS VPGEGEHKIM YIR + P ++ N RHCLYGLDADL
Sbjct: 150 FINKKISEDTDWQGVEIVLSGHEVPGEGEHKIMEYIRCSKAQPDYESNVRHCLYGLDADL 209
Query: 238 IMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPI 297
IML L +H+ HF +LRE +T Q K +
Sbjct: 210 IMLGLLSHDPHFCLLREEVTFGRQVSK----------------------------KSKEL 241
Query: 298 HKKKYQFLNIWVLREYLQYELDIPNPP----FPINFERIVDDFVFLCFFVGNDFLPHMPT 353
+ + L++ V+REYL+ E FP + ER++DDF+ + FFVGNDFLP++P
Sbjct: 242 EHQNFYLLHLSVVREYLELEFQELEQEGVLDFPFDLERVIDDFILMAFFVGNDFLPNLPN 301
Query: 354 LEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQ 413
L I EGA+ L+ +Y+ MGGY+ + G + + R+ + +++ E + F+
Sbjct: 302 LHINEGALALMFKLYKEVLPKMGGYINEQGVINVQRLGMLVTALSAVEYRFFEA------ 355
Query: 414 AYEYNEAMKLNARRESSEEL 433
E ++A + ++++S+ L
Sbjct: 356 --ENSDAQWIKSKKDSNVTL 373
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 84/165 (50%), Positives = 108/165 (65%), Gaps = 6/165 (3%)
Query: 451 YKERYYADKFE--ISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPF 508
+K++YY KF + N EE+ K+ ++ YV+GL WV YYY+ + SW WF+ YHYAP
Sbjct: 506 WKDKYYRTKFGWGLDNKEEMKKLTQN----YVQGLQWVLFYYYRGIASWPWFFQYHYAPM 561
Query: 509 ASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPD 568
SD+ D ++ F LG+PFRPFDQLMG LP S +P Y +LMT P SPIY FYP D
Sbjct: 562 ISDVNDGLGADMDFKLGQPFRPFDQLMGVLPDRSKKIVPTAYWDLMTSPDSPIYDFYPRD 621
Query: 569 FQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRN 613
F +DMNGK+ W+ VVK+PFIDEK LL K E L+ +E RN
Sbjct: 622 FDLDMNGKKMEWEAVVKIPFIDEKRLLDALKTKETQLSADEKARN 666
>gi|425774945|gb|EKV13236.1| Exonuclease Kem1, putative [Penicillium digitatum Pd1]
Length = 1393
Score = 295 bits (754), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 170/440 (38%), Positives = 248/440 (56%), Gaps = 74/440 (16%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP F+RWL++RYP SI ++ E EFD+LYLDMNGII
Sbjct: 1 MGVPKFFRWLSERYP-SISMLIAES-------------------RIPEFDSLYLDMNGII 40
Query: 61 HPCFHPDGKPAPT---SYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRT 117
H C H D +PT + D +F +IF+YI+H+F ++P+KL Y+A+DGVAPRAKMNQQR
Sbjct: 41 HNCTHSDSD-SPTFRMTEDQMFIAIFNYIEHLFGKIKPKKLFYMAVDGVAPRAKMNQQRA 99
Query: 118 RRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQY 177
RRFR A DA A+ E+ +++ E K + DSN ITPGT+FM L+ L+Y
Sbjct: 100 RRFRTALDAENAK--EKAIQQGLE--------MPKEDAFDSNCITPGTEFMQKLTKQLKY 149
Query: 178 FIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADL 237
FI ++++ WQ +++LS VPGEGEHKIM YIR + P ++ N RHCLYGLDADL
Sbjct: 150 FINKKISEDTDWQGVEIVLSGHEVPGEGEHKIMEYIRCSKAQPDYESNVRHCLYGLDADL 209
Query: 238 IMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPI 297
IML L +H+ HF +LRE +T Q K +
Sbjct: 210 IMLGLLSHDPHFCLLREEVTFGRQVSK----------------------------KSKEL 241
Query: 298 HKKKYQFLNIWVLREYLQYELDIPNPP----FPINFERIVDDFVFLCFFVGNDFLPHMPT 353
+ + L++ V+REYL+ E FP + ER++DDF+ + FFVGNDFLP++P
Sbjct: 242 EHQNFYLLHLSVVREYLELEFQELEQEGVLDFPFDLERVIDDFILMAFFVGNDFLPNLPN 301
Query: 354 LEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQ 413
L I EGA+ L+ +Y+ MGGY+ + G + + R+ + +++ E + F+
Sbjct: 302 LHINEGALALMFKLYKEVLPKMGGYINEQGVINVQRLGMLVTALSAVEYRFFEA------ 355
Query: 414 AYEYNEAMKLNARRESSEEL 433
E ++A + ++++S+ L
Sbjct: 356 --ENSDAQWIKSKKDSNVTL 373
Score = 172 bits (437), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 84/165 (50%), Positives = 108/165 (65%), Gaps = 6/165 (3%)
Query: 451 YKERYYADKFE--ISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPF 508
+K++YY KF + N EE+ K+ ++ YV+GL WV YYY+ + SW WF+ YHYAP
Sbjct: 506 WKDKYYRTKFGWGLDNKEEMKKLTQN----YVQGLQWVLFYYYRGIASWPWFFQYHYAPM 561
Query: 509 ASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPD 568
SD+ D ++ F LG+PFRPFDQLMG LP S +P Y +LMT P SPIY FYP D
Sbjct: 562 ISDVNDGLGADMDFKLGQPFRPFDQLMGVLPDRSKKIVPTAYWDLMTSPDSPIYDFYPRD 621
Query: 569 FQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRN 613
F +DMNGK+ W+ VVK+PFIDEK LL K E L+ +E RN
Sbjct: 622 FDLDMNGKKMEWEAVVKIPFIDEKRLLDALKTKETQLSADEKARN 666
>gi|218185281|gb|EEC67708.1| hypothetical protein OsI_35184 [Oryza sativa Indica Group]
Length = 944
Score = 295 bits (754), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 154/273 (56%), Positives = 186/273 (68%), Gaps = 20/273 (7%)
Query: 1 MGVPAFYRWLADRYP--LSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNG 58
MGVP+FYRWL +YP +S + ++D G A P + NLYLDMNG
Sbjct: 1 MGVPSFYRWLVGKYPAIVSPANDDDDDVGSSSNGAAAPP----------VYHNLYLDMNG 50
Query: 59 IIHPCFHPDGK-----PAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMN 113
IIHPCFHP + P PT+ ++VF S+FDY+D + +VRP LLYLA+DGVAPRAKMN
Sbjct: 51 IIHPCFHPQDQVCPPSPVPTTLEEVFHSMFDYMDRLIRIVRPTSLLYLAVDGVAPRAKMN 110
Query: 114 QQRTRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKE---KPETCDSNVITPGTQFMAV 170
QQR RRF++A A +AE EE LR F GK + +E E D NVITPGT+FM
Sbjct: 111 QQRARRFKSAMPAKQAEVEENILRDRFRAEGKKVLPQETSSSSEVSDPNVITPGTEFMDK 170
Query: 171 LSAALQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCL 230
LS AL+Y+I+A LN P W+ VILSDANVPGEGEHKIMS+IR QR G+DPNTRHCL
Sbjct: 171 LSDALKYYIRAHLNNDPLWKDINVILSDANVPGEGEHKIMSFIRAQRGREGYDPNTRHCL 230
Query: 231 YGLDADLIMLSLATHEIHFSILREVITLPGQQE 263
YGLDADLIML+LA+HE+HFSILRE + QE
Sbjct: 231 YGLDADLIMLALASHEVHFSILREEVLHQNNQE 263
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 80/200 (40%), Positives = 115/200 (57%), Gaps = 25/200 (12%)
Query: 429 SSEELLQAPVAVADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCR 488
+ ++L++ D +KLG PG+K R++ +KF+ +EI K++ ++V KY+EGLCWV
Sbjct: 505 NKQDLIKTGACKHDKIKLGSPGWKSRFFKEKFDAETKDEIAKLQNEMVQKYLEGLCWVLC 564
Query: 489 YYYQDVCSWQWFYPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPE 548
YY+ DV SW W+YP++YAPFASD++ LS S ALP
Sbjct: 565 YYFADVPSWSWYYPFYYAPFASDVRGLS-------------------------RSFALPG 599
Query: 549 KYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEE 608
Y LM S I FYP + ID +GKR+ WQG+ KLPFI++KLLL TK E L
Sbjct: 600 CYSKLMDCDESAIQAFYPSELDIDTDGKRYLWQGIAKLPFIEDKLLLSVTKTAEKDLAVH 659
Query: 609 ELFRNSVMLDLLYVHPQHPL 628
EL RN+V + +++ + L
Sbjct: 660 ELRRNTVRQEKIFLRNSNAL 679
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 40/67 (59%), Gaps = 8/67 (11%)
Query: 358 EGAINLLMHVYRREFTAMGGYLTDAGEV--------LLDRVEKFIQSVAVYEDQIFQKRT 409
+GAI+LL+ VY+ F MGGY+ D +V + R+EKF +++YE++IF K
Sbjct: 305 QGAIDLLIEVYKTSFNKMGGYIVDTDKVKDKHAAYLKVSRLEKFFHKLSLYEEKIFLKCY 364
Query: 410 RIQQAYE 416
+ + +E
Sbjct: 365 DLARGFE 371
>gi|429962361|gb|ELA41905.1| hypothetical protein VICG_01089 [Vittaforma corneae ATCC 50505]
Length = 630
Score = 294 bits (753), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 209/665 (31%), Positives = 328/665 (49%), Gaps = 113/665 (16%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP+ Y+W+ RYP V+ P + + + DNLYLD N II
Sbjct: 1 MGVPSLYKWITQRYP-----EVKLKPNREEDHLT---------------DNLYLDFNAII 40
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC + + + +++K++ Y+D + +RPR+LLY+++DGVAPRAK+NQQR+RRF
Sbjct: 41 HPCCNKALENMADTDTELYKNLEKYMDEVIARIRPRRLLYISVDGVAPRAKLNQQRSRRF 100
Query: 121 RAAKDAAEA------------EAEEERLR---KEFEEAG--KLLSAKEKPETC---DSNV 160
A++ +E A RL +E E + K +S + P C D+N
Sbjct: 101 VHAREVSEQGNFYFKDDCGNEPAHHSRLTVLDQEIENSAVSKNMSDEATPNGCGVFDTNA 160
Query: 161 ITPGTQFMAVLSAALQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLP 220
I+PGT+FM L A LQ I +++ W VI S VPGEGE KIM YIR +N
Sbjct: 161 ISPGTEFMQRLDAFLQELISFKMSFDQRWTGFNVIYSSYRVPGEGEQKIMEYIRKHQN-- 218
Query: 221 GFDPNTRHCLYGLDADLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHG 280
P ++ DADLI L L+ + +LRE G G L+
Sbjct: 219 ---PKFSSVIFSPDADLIFLGLSLFDHSVMVLREEPPKHGNSN--------GSLS----- 262
Query: 281 KPGDNPADWNGVDDTPIHKKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLC 340
N D+ VD I + K+ ++R++ +Y + +P N + ++D++FLC
Sbjct: 263 ----NEKDFVLVD---IPRLKH-----LIIRDF-KYVMKMP-----FNHRKFLEDWIFLC 304
Query: 341 FFVGNDFLPHMPTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVY 400
F VGNDFLP P EIR A++ L H+ + + ++TD G++ D + +F A
Sbjct: 305 FTVGNDFLPCTPCFEIRTDALDKLTHILQTVYLNTRSFITDNGKINYDVLREFFIECARR 364
Query: 401 EDQ-IFQKRTRIQQAYEYNEAMKLNARRESSEELLQAPVAVADTVKLGEPGYKERYYADK 459
E+ I +KR + N ++N + SEE L K R+Y +K
Sbjct: 365 ENTFIVEKRNNL-----VNVRQRMNLPYDPSEEFF-----------LETERGKIRFYVEK 408
Query: 460 FEISNPEEIDKVKKDVVL---KYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLS 516
I++ +KD+++ +Y++GL WV YY+ D+ SW+W+YPYH+APF +DL +
Sbjct: 409 MGITS-------EKDLLIACEEYIKGLEWVYNYYFYDMPSWEWYYPYHFAPFMTDLALVK 461
Query: 517 DLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGK 576
D++ F G P +P +QL+ LP +S LP ++ + ++YP +F++DM K
Sbjct: 462 DVKFKFTTGRPLKPLEQLLTVLPPSSKDLLPSCLHSVFDE----FKEYYPTEFKLDMFQK 517
Query: 577 RFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLY------VHPQHPLYQ 630
WQ V LPFI+ + L++ + + L E RN + Y + +PLY
Sbjct: 518 CMDWQAVPILPFINVQDLIKAFENRQNELKFSECERNITGYPIFYSKQPRLIAKIYPLYT 577
Query: 631 QITLY 635
++ Y
Sbjct: 578 ELKPY 582
>gi|295657260|ref|XP_002789200.1| 5'-3' exoribonuclease [Paracoccidioides sp. 'lutzii' Pb01]
gi|226284447|gb|EEH40013.1| 5'-3' exoribonuclease [Paracoccidioides sp. 'lutzii' Pb01]
Length = 1445
Score = 294 bits (753), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 166/413 (40%), Positives = 238/413 (57%), Gaps = 66/413 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP F+RW+++RYP +I ++ E+ EFD LYLDMNGII
Sbjct: 1 MGVPKFFRWMSERYP-AISQLIAEN-------------------RIPEFDCLYLDMNGII 40
Query: 61 HPCFHPDGKPAPT---SYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRT 117
H C H D +PT + D +F +IF+YI+H++ ++P+KL ++AIDGVAPRAKMNQQR
Sbjct: 41 HNCTHKDSD-SPTFRMTEDKMFIAIFNYIEHLYGKIKPKKLFFMAIDGVAPRAKMNQQRA 99
Query: 118 RRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQY 177
RRFR A DA A+ E+A K K E DSN ITPGT+FMA L+ L+Y
Sbjct: 100 RRFRTAYDAEVAK----------EKAIKQGIEMPKEEAFDSNCITPGTEFMAKLTQQLKY 149
Query: 178 FIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADL 237
FI ++++ WQ +++LS VPGEGEHKIM YIR + PG+ P+ RHCLYGLDADL
Sbjct: 150 FINKKVSEDVEWQGVEIVLSGHEVPGEGEHKIMEYIRQTKAQPGYHPDVRHCLYGLDADL 209
Query: 238 IMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPI 297
IML L +H+ HF +LRE +T Q +K +
Sbjct: 210 IMLGLLSHDPHFCLLREEVTFGRQSQK----------------------------KSKEL 241
Query: 298 HKKKYQFLNIWVLREYLQYELDIPNPP----FPINFERIVDDFVFLCFFVGNDFLPHMPT 353
+ + +++ ++REYL+ E FP + ERI+DDF+ + FFVGNDFLP++P
Sbjct: 242 EHQNFYLMHLCMVREYLELEFQELEEEDALQFPFDLERIIDDFILMAFFVGNDFLPNLPN 301
Query: 354 LEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQ 406
L I EGA+ + +Y++ +GGY+ + G + L+R+ + S++ E + F+
Sbjct: 302 LHINEGALAWMFKIYKQVLPKLGGYINEQGTINLERLGILLDSLSDVEFRFFE 354
Score = 165 bits (418), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 92/217 (42%), Positives = 124/217 (57%), Gaps = 16/217 (7%)
Query: 410 RIQQAYEYNEAMKLNAR-RESSEELLQAPVAVADTVKLGEPGYKERYYADKFE--ISNPE 466
R+ + YE NA+ +E++ E Q +K E +K YY KF + N E
Sbjct: 486 RVMRRYE-------NAKVKETTAEEAQQAAEKKYELKFQE--WKNNYYKSKFRWGMDNHE 536
Query: 467 EIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDLEITFFLGE 526
E+ K+ ++ YV+GL WV YYY+ V SW WFY YHY+P SD+K ++ F LG+
Sbjct: 537 EMRKLTEN----YVQGLQWVLYYYYRGVASWPWFYQYHYSPMISDVKLGLKADMNFDLGQ 592
Query: 527 PFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKL 586
PF PF QLMG LP S +P + LMT P SPI FYP DF++DMNGK+ W+ VVK+
Sbjct: 593 PFHPFQQLMGVLPDRSKQIVPAAFHELMTSPESPIIDFYPRDFELDMNGKKMDWEAVVKI 652
Query: 587 PFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVH 623
PFI+EK LL+ E LT EE RN + L + +
Sbjct: 653 PFIEEKRLLKAMATKEHLLTPEEKARNEFGVTLKFTY 689
>gi|240277600|gb|EER41108.1| exonuclease II Exo2 [Ajellomyces capsulatus H143]
Length = 1138
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 165/413 (39%), Positives = 238/413 (57%), Gaps = 66/413 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP F+RW+++RYP +I ++ E+ EFD LYLDMNGII
Sbjct: 1 MGVPKFFRWMSERYP-AISQLIAEN-------------------RIPEFDCLYLDMNGII 40
Query: 61 HPCFHPDGKPAPT---SYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRT 117
H C H D +PT + D +F +IF+YI+H++ ++P++L ++AIDGVAPRAKMNQQR
Sbjct: 41 HNCTHKDSD-SPTFRMTEDKMFIAIFNYIEHLYGKIKPKQLFFMAIDGVAPRAKMNQQRA 99
Query: 118 RRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQY 177
RRFR A DA A+ E+A K K E DSN ITPGT+FMA L+ L+Y
Sbjct: 100 RRFRTALDAELAK----------EKAIKQGIEMPKEEAFDSNCITPGTEFMAKLTQQLKY 149
Query: 178 FIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADL 237
FI ++++ WQ +++LS VPGEGEHKIM YIR + PG+ P+ RHCLYGLDADL
Sbjct: 150 FINKKVSEDVEWQGVEIVLSGHEVPGEGEHKIMEYIRQSKAQPGYQPDIRHCLYGLDADL 209
Query: 238 IMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPI 297
IML L +H+ HF +LRE +T Q +K +
Sbjct: 210 IMLGLLSHDPHFCLLREEVTFGRQSQK----------------------------KSKEL 241
Query: 298 HKKKYQFLNIWVLREYLQYELDIPNP----PFPINFERIVDDFVFLCFFVGNDFLPHMPT 353
+ + +++ ++REYL+ E FP + ER++DDF+ + FFVGNDFLP++P
Sbjct: 242 EHQNFYLMHLCMVREYLELEFQELEEENALQFPFDLERVIDDFILMAFFVGNDFLPNLPN 301
Query: 354 LEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQ 406
L I EGA+ + VY++ +GGY+ + G + L+R+ + S++ E + F+
Sbjct: 302 LHINEGALAWMFKVYKQVLPKLGGYINEQGTINLERLGVLLDSLSDVEFRFFE 354
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 92/217 (42%), Positives = 126/217 (58%), Gaps = 16/217 (7%)
Query: 410 RIQQAYEYNEAMKLNAR-RESSEELLQAPVAVADTVKLGEPGYKERYYADKF--EISNPE 466
R+ + YE NA+ +E++ E Q +K E +K+ YY KF + N E
Sbjct: 483 RVMKRYE-------NAKVKETTAEEAQQAAEKKYELKFQE--WKDNYYKSKFGWAMDNHE 533
Query: 467 EIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDLEITFFLGE 526
E+ ++ ++ YV+GL WV YYY+ V SW WFY YHY+P SD+K + ++ F LG+
Sbjct: 534 EMRQLTEN----YVQGLQWVLYYYYRGVASWPWFYQYHYSPMISDVKLGLEADMNFDLGQ 589
Query: 527 PFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKL 586
PF PF+QLMG LP S +P Y LMT P SPI FYP DF++DMNGK+ W+ VVK+
Sbjct: 590 PFHPFEQLMGVLPDRSKQIVPSAYHELMTSPESPIIDFYPRDFELDMNGKKMEWEAVVKI 649
Query: 587 PFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVH 623
PFIDEK LL + LT EE RN + L + +
Sbjct: 650 PFIDEKRLLSAMATKKHLLTPEENARNEFGVTLKFTY 686
>gi|410077707|ref|XP_003956435.1| hypothetical protein KAFR_0C03080 [Kazachstania africana CBS 2517]
gi|372463019|emb|CCF57300.1| hypothetical protein KAFR_0C03080 [Kazachstania africana CBS 2517]
Length = 1499
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 160/411 (38%), Positives = 238/411 (57%), Gaps = 63/411 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MG+P F+R++++R+P+ I ++E G P EFDNLYLDMN I+
Sbjct: 1 MGIPKFFRYISERWPM-ISQLIE--------GAQIP-----------EFDNLYLDMNSIL 40
Query: 61 HPCFH--PDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C H D + ++VF IF YIDH+F ++P+K+ Y+AIDGVAPRAKMNQQR+R
Sbjct: 41 HTCTHGNDDDVTKRMTEEEVFAKIFTYIDHLFHTIKPKKVFYMAIDGVAPRAKMNQQRSR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RFR A DA A L+K E+ ++ K E DSN ITPGT+FMA L+ L+YF
Sbjct: 101 RFRTAMDAEAA------LKKAIEKGEEI----PKGEPFDSNAITPGTEFMAKLTKNLKYF 150
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
I +++ W+ VI S VPGEGEHKIM +IR R+ ++ NTRHC+YGLDADLI
Sbjct: 151 IHDKISNDSKWREVDVIFSGHEVPGEGEHKIMDFIRNIRSQKDYNNNTRHCIYGLDADLI 210
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
ML L+TH HF++LRE + G+ PA P+
Sbjct: 211 MLGLSTHAPHFALLREEVVF---------------------GRRSSKPA--------PLE 241
Query: 299 KKKYQFLNIWVLREYLQYELD--IPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEI 356
+ + L++ +LREY++ E + + F +FERI+DDF+ + F +GNDFLP++P L +
Sbjct: 242 HQNFYLLHLSLLREYMELEFNEIADDLKFDYDFERILDDFILVMFVIGNDFLPNLPDLHL 301
Query: 357 REGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQK 407
+GA +L+ ++ + GY+ + G++ L+R+ ++ ++ +E F+K
Sbjct: 302 NKGAFPVLLQTFKEALLHLDGYINENGQINLERLRVWLNYLSQFELMNFEK 352
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 75/175 (42%), Positives = 98/175 (56%), Gaps = 6/175 (3%)
Query: 450 GYKERYYADK--FEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAP 507
+K+ YY DK F ++ E + + K+ YVEGL WV YYY+ SW W+Y HYAP
Sbjct: 513 NWKQEYYKDKLGFAQNDSETVTTLAKN----YVEGLQWVLYYYYRGCPSWGWYYRDHYAP 568
Query: 508 FASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPP 567
SDL+ D I F G PF PF+QLM LP S + +P +R LM D +SPI FYP
Sbjct: 569 RISDLEKGLDQIIKFDKGRPFTPFEQLMAVLPERSKNLIPAAFRPLMYDTNSPILDFYPS 628
Query: 568 DFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYV 622
++D NGK W+ VV L F+DE L+ K L L+ EE RN DL ++
Sbjct: 629 QVKLDKNGKTADWEAVVLLTFVDENRLVDAMKPLLSKLSPEEKVRNQFGTDLKFI 683
>gi|367003924|ref|XP_003686695.1| hypothetical protein TPHA_0H00510 [Tetrapisispora phaffii CBS 4417]
gi|357524997|emb|CCE64261.1| hypothetical protein TPHA_0H00510 [Tetrapisispora phaffii CBS 4417]
Length = 1492
Score = 293 bits (751), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 161/412 (39%), Positives = 239/412 (58%), Gaps = 62/412 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MG+P F+R++++R+PL I+ ++E D Q+ EFDNLYLDMN I+
Sbjct: 1 MGIPKFFRYISERWPL-ILQLIEND-QIP------------------EFDNLYLDMNSIL 40
Query: 61 HPCFHP---DGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRT 117
H C H D S ++V+ IF YIDH+ ++P+K+ Y+AIDGVAPRAKMNQQR+
Sbjct: 41 HNCTHGNDMDNTRQRLSEEEVYAKIFAYIDHLLNTIKPKKVFYMAIDGVAPRAKMNQQRS 100
Query: 118 RRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQY 177
RRFR A DA A L+K +L K E DSN ITPGT+FMA L+ L+Y
Sbjct: 101 RRFRTAMDAETA------LKKAIANGDEL----PKGEPFDSNSITPGTEFMAKLTRNLKY 150
Query: 178 FIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADL 237
FI +++ WQ +V+ S VPGEGEHKIM +IR R+ ++ NTRHC+YGLDADL
Sbjct: 151 FIHDKISNDLNWQNIEVVFSGHEVPGEGEHKIMDFIRNLRSQKDYEQNTRHCIYGLDADL 210
Query: 238 IMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPI 297
IML L+TH+ HFS+LRE + G++ N P+
Sbjct: 211 IMLGLSTHDPHFSLLREEVKFGGRR---------------------------NNSGSLPL 243
Query: 298 HKKKYQFLNIWVLREYLQYE-LDIP-NPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLE 355
K+ + L++ +LREY+ E ++I N F F+RI+DDF+ + F +GNDFLP++P L
Sbjct: 244 EKQNFYLLHLSLLREYMNLEFIEISTNLQFKYEFDRILDDFILIMFVIGNDFLPNLPDLH 303
Query: 356 IREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQK 407
+ +GA +++ ++ + GY+ + G++ L R+ ++ ++ +E F+K
Sbjct: 304 LNKGAFPVILQTFKEALLHLDGYINENGKINLKRLGVWLNYLSQFELMNFEK 355
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 68/153 (44%), Positives = 83/153 (54%), Gaps = 1/153 (0%)
Query: 474 DVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQ 533
++ YVEGL WV YYY+ SW W+Y HYAP SDL D F PF PF Q
Sbjct: 571 EIARNYVEGLQWVLYYYYRGCPSWSWYYKGHYAPRISDLAKGLDQTFVFEKRHPFTPFQQ 630
Query: 534 LMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKL 593
LM LP S + +P R LM D SPI FYP + Q+D NGK W+ VV L F+DE
Sbjct: 631 LMAVLPERSKNLIPAVLRPLMFDEKSPILDFYPNEVQLDKNGKSADWEAVVLLSFVDEDR 690
Query: 594 LLRQTKKLEVFLTEEELFRNSVMLDLLY-VHPQ 625
L+ + LT EE RNS +DL + +PQ
Sbjct: 691 LVTAMQPYLEKLTPEEKERNSFGIDLTFRFNPQ 723
>gi|325093685|gb|EGC46995.1| exonuclease II Exo2 [Ajellomyces capsulatus H88]
Length = 1451
Score = 293 bits (751), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 165/413 (39%), Positives = 238/413 (57%), Gaps = 66/413 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP F+RW+++RYP +I ++ E+ EFD LYLDMNGII
Sbjct: 1 MGVPKFFRWMSERYP-AISQLIAEN-------------------RIPEFDCLYLDMNGII 40
Query: 61 HPCFHPDGKPAPT---SYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRT 117
H C H D +PT + D +F +IF+YI+H++ ++P++L ++AIDGVAPRAKMNQQR
Sbjct: 41 HNCTHKDSD-SPTFRMTEDKMFIAIFNYIEHLYGKIKPKQLFFMAIDGVAPRAKMNQQRA 99
Query: 118 RRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQY 177
RRFR A DA A+ E+A K K E DSN ITPGT+FMA L+ L+Y
Sbjct: 100 RRFRTALDAELAK----------EKAIKQGIEMPKEEAFDSNCITPGTEFMAKLTQQLKY 149
Query: 178 FIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADL 237
FI ++++ WQ +++LS VPGEGEHKIM YIR + PG+ P+ RHCLYGLDADL
Sbjct: 150 FINKKVSEDVEWQGVEIVLSGHEVPGEGEHKIMEYIRQSKAQPGYQPDIRHCLYGLDADL 209
Query: 238 IMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPI 297
IML L +H+ HF +LRE +T Q +K +
Sbjct: 210 IMLGLLSHDPHFCLLREEVTFGRQSQK----------------------------KSKEL 241
Query: 298 HKKKYQFLNIWVLREYLQYELDIPNPP----FPINFERIVDDFVFLCFFVGNDFLPHMPT 353
+ + +++ ++REYL+ E FP + ER++DDF+ + FFVGNDFLP++P
Sbjct: 242 EHQNFYLMHLCMVREYLELEFQELEEENALQFPFDLERVIDDFILMAFFVGNDFLPNLPN 301
Query: 354 LEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQ 406
L I EGA+ + VY++ +GGY+ + G + L+R+ + S++ E + F+
Sbjct: 302 LHINEGALAWMFKVYKQVLPKLGGYINEQGTINLERLGVLLDSLSDVEFRFFE 354
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 92/217 (42%), Positives = 126/217 (58%), Gaps = 16/217 (7%)
Query: 410 RIQQAYEYNEAMKLNAR-RESSEELLQAPVAVADTVKLGEPGYKERYYADKFE--ISNPE 466
R+ + YE NA+ +E++ E Q +K E +K+ YY KF + N E
Sbjct: 483 RVMKRYE-------NAKVKETTAEEAQQAAEKKYELKFQE--WKDNYYKSKFGWGMDNHE 533
Query: 467 EIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDLEITFFLGE 526
E+ ++ ++ YV+GL WV YYY+ V SW WFY YHY+P SD+K + ++ F LG+
Sbjct: 534 EMRQLTEN----YVQGLQWVLYYYYRGVASWPWFYQYHYSPMISDVKLGLEADMNFDLGQ 589
Query: 527 PFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKL 586
PF PF+QLMG LP S +P Y LMT P SPI FYP DF++DMNGK+ W+ VVK+
Sbjct: 590 PFHPFEQLMGVLPDRSKQIVPSAYHELMTSPESPIIDFYPRDFELDMNGKKMEWEAVVKI 649
Query: 587 PFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVH 623
PFIDEK LL + LT EE RN + L + +
Sbjct: 650 PFIDEKRLLSAMATKKHLLTPEENARNEFGVTLKFTY 686
>gi|225557050|gb|EEH05337.1| exonuclease [Ajellomyces capsulatus G186AR]
Length = 1454
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 165/413 (39%), Positives = 238/413 (57%), Gaps = 66/413 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP F+RW+++RYP +I ++ E+ EFD LYLDMNGII
Sbjct: 1 MGVPKFFRWMSERYP-AISQLIAEN-------------------RIPEFDCLYLDMNGII 40
Query: 61 HPCFHPDGKPAPT---SYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRT 117
H C H D +PT + D +F +IF+YI+H++ ++P++L ++AIDGVAPRAKMNQQR
Sbjct: 41 HNCTHKDSD-SPTFRMTEDKMFIAIFNYIEHLYGKIKPKQLFFMAIDGVAPRAKMNQQRA 99
Query: 118 RRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQY 177
RRFR A DA A+ E+A K K E DSN ITPGT+FMA L+ L+Y
Sbjct: 100 RRFRTALDAELAK----------EKAIKQGIEMPKEEAFDSNCITPGTEFMAKLTQQLKY 149
Query: 178 FIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADL 237
FI ++++ WQ +++LS VPGEGEHKIM YIR + PG+ P+ RHCLYGLDADL
Sbjct: 150 FINKKVSEDVEWQGVEIVLSGHEVPGEGEHKIMEYIRQSKAQPGYQPDIRHCLYGLDADL 209
Query: 238 IMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPI 297
IML L +H+ HF +LRE +T Q +K +
Sbjct: 210 IMLGLLSHDPHFCLLREEVTFGRQSQK----------------------------KSKEL 241
Query: 298 HKKKYQFLNIWVLREYLQYELDIPNPP----FPINFERIVDDFVFLCFFVGNDFLPHMPT 353
+ + +++ ++REYL+ E FP + ER++DDF+ + FFVGNDFLP++P
Sbjct: 242 EHQNFYLMHLCMVREYLELEFQELEEENALQFPFDLERVIDDFILMAFFVGNDFLPNLPN 301
Query: 354 LEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQ 406
L I EGA+ + VY++ +GGY+ + G + L+R+ + S++ E + F+
Sbjct: 302 LHINEGALAWMFKVYKQVLPKLGGYINEQGTINLERLGVLLDSLSDVEFRFFE 354
Score = 165 bits (417), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 91/217 (41%), Positives = 126/217 (58%), Gaps = 16/217 (7%)
Query: 410 RIQQAYEYNEAMKLNAR-RESSEELLQAPVAVADTVKLGEPGYKERYYADKFE--ISNPE 466
R+ + YE NA+ +E++ E Q +K E +K+ YY KF + N E
Sbjct: 483 RVMKRYE-------NAKVKETTAEEAQQAAEKKYELKFQE--WKDNYYKSKFGWGMDNHE 533
Query: 467 EIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDLEITFFLGE 526
E+ ++ ++ YV+GL WV YYY+ V SW WFY YHY+P SD+K + ++ F LG+
Sbjct: 534 EMRQLTEN----YVQGLQWVLYYYYRGVASWPWFYQYHYSPMISDVKLGLEADMNFDLGQ 589
Query: 527 PFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKL 586
PF PF+QLMG LP S +P + LMT P SPI FYP DF++DMNGK+ W+ VVK+
Sbjct: 590 PFHPFEQLMGVLPDRSKQIVPSAFHELMTSPESPIIDFYPRDFELDMNGKKMEWEAVVKI 649
Query: 587 PFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVH 623
PFIDEK LL + LT EE RN + L + +
Sbjct: 650 PFIDEKRLLSAMATKKHLLTPEENARNEFGVTLKFTY 686
>gi|326429495|gb|EGD75065.1| hypothetical protein PTSG_06722 [Salpingoeca sp. ATCC 50818]
Length = 1402
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 166/408 (40%), Positives = 235/408 (57%), Gaps = 59/408 (14%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MG+P +YRW+++RYP + VV E D FDNLYLDMNGII
Sbjct: 1 MGIPKYYRWISERYP-CLSQVVRESEVPD-------------------FDNLYLDMNGII 40
Query: 61 HPCFHP-DGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRR 119
H C HP D + + +F+ I YI+ +F ++RP+++ Y+AIDG APRAKMNQQR RR
Sbjct: 41 HTCSHPSDDVNFRLTEEKMFEDICAYIETLFRIIRPQRVFYMAIDGCAPRAKMNQQRARR 100
Query: 120 FRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFI 179
FR+AK+A EA R++ E GKLL + P DSN ITPGT FM L L+YF+
Sbjct: 101 FRSAKEAEEA-------RQKAEREGKLLDDPDAPPPFDSNCITPGTPFMHRLHQHLEYFV 153
Query: 180 QARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIM 239
QA++ P WQ +V+LS VPGEGEHKIM +IR ++ +D NTRHCLYGLDADLI+
Sbjct: 154 QAKITSDPAWQGLRVVLSGHQVPGEGEHKIMDFIRSEKLRDDYDANTRHCLYGLDADLII 213
Query: 240 LSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIHK 299
L L +HE HFS+LRE + G+++K Q DN
Sbjct: 214 LGLVSHEPHFSLLREEVRF-GRRQKSKKDSQ-------------DN-------------- 245
Query: 300 KKYQFLNIWVLREYLQYE-LDI-PNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIR 357
+ L++ + REYL+ E D+ P FP +FER++DD+V L F +GNDF+PH+P I
Sbjct: 246 -VFHLLSLSLYREYLRMEFFDVKPLLSFPFDFERLLDDWVLLGFLIGNDFIPHLPHFHIS 304
Query: 358 EGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIF 405
+ + L Y+ + G++TD G + + R++ ++ +++ + F
Sbjct: 305 QDIVPTLYSSYKLALQKLDGWITDGGTINMARLQVLLEELSIIDRNAF 352
Score = 159 bits (401), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 79/173 (45%), Positives = 102/173 (58%), Gaps = 2/173 (1%)
Query: 451 YKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFAS 510
YK YY +K + + D+ + +YV GL W+ YYY+ V SW WF+P HYAPF S
Sbjct: 463 YKANYYLEKLGVQRYD--DEFRLSQAQEYVRGLQWILFYYYKGVPSWSWFFPSHYAPFVS 520
Query: 511 DLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQ 570
D++ + D + F LGEPF PF+QLM LP AS +P Y+ LM D SPI FYP F+
Sbjct: 521 DIRAIEDFKPEFELGEPFSPFEQLMSVLPPASRDHVPPAYQPLMLDSQSPIIDFYPQTFK 580
Query: 571 IDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVH 623
D+NGKR AW+ VV +PFID+ LL L LT+ E RN L +VH
Sbjct: 581 TDLNGKRNAWEAVVLIPFIDQDRLLSAVHSLSHLLTDAEKNRNKHSLAKCFVH 633
>gi|403171712|ref|XP_003330904.2| hypothetical protein PGTG_12441 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375169305|gb|EFP86485.2| hypothetical protein PGTG_12441 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 751
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 163/419 (38%), Positives = 231/419 (55%), Gaps = 67/419 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MG+P F+RW+ +YP+ + V++ G+ + E DNLYLDMNGII
Sbjct: 1 MGIPKFFRWMTQKYPVVLHQVIQ------GDCIP-------------EIDNLYLDMNGII 41
Query: 61 HPCFHPDGKPA--PTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C HP A + ++F IF ++H+F L +P+KL ++A+DGVAPRAKMN+QR+R
Sbjct: 42 HNCSHPSTPTADFQITEPEIFSGIFAALEHLFTLAKPKKLFFMAVDGVAPRAKMNEQRSR 101
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RF+AA+ A + + R+ F+ + DSN ITPGT FMA L L+YF
Sbjct: 102 RFKAAQ-ANQTMLQRNAFRR-FQTVS---------NSFDSNCITPGTPFMARLHEQLKYF 150
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
I ++ + P WQ +VI S +VPGEGEHKIM YIR + + P+ RHC+YGLDADLI
Sbjct: 151 INKKVTEDPAWQAVQVIFSGHDVPGEGEHKIMEYIRRAKTQQDYSPHIRHCIYGLDADLI 210
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
ML+L +HE HF +LRE P ++ KP N D
Sbjct: 211 MLALLSHEPHFCLLREENRAPLKR------------------KPTINLKD---------- 242
Query: 299 KKKYQFLNIWVLREYLQYELD----IPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTL 354
+++ I + R+YL +E I N F + RI+DDF+ LC FVGNDFLPH+P L
Sbjct: 243 -QQFHLFQISLFRDYLNWEFSSLQLIKN--FKYDIRRIIDDFILLCIFVGNDFLPHLPNL 299
Query: 355 EIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQ 413
I +GAI +L +Y++ GGYL D+G + R++ + + +E Q F+ T Q
Sbjct: 300 HIDDGAIGVLFKIYKKILPQAGGYLNDSGTLHTHRLQLLLDELVSHEYQHFETSTGSNQ 358
Score = 165 bits (418), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 76/163 (46%), Positives = 103/163 (63%), Gaps = 2/163 (1%)
Query: 451 YKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFAS 510
+K +YY +K E+ + + K + YVEGL W+ +YYY V SW W YPYHYAP S
Sbjct: 521 WKSKYYKNKMELQYNDSVQLHK--LTHAYVEGLQWILQYYYTGVASWSWAYPYHYAPMVS 578
Query: 511 DLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQ 570
DL ++ + +F LG PF+PF+QLMG LP SS+ +P +++LMT P SPI YP F+
Sbjct: 579 DLNKVASYKFSFELGSPFKPFEQLMGVLPGLSSTHVPSAFQDLMTKPDSPILDLYPTSFE 638
Query: 571 IDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRN 613
D+NGKR WQ + K+PFID + LL K E L +EE+ RN
Sbjct: 639 TDLNGKRHEWQAIAKIPFIDSRRLLEAMKAHEYKLKDEEIERN 681
>gi|448526146|ref|XP_003869280.1| Kem1 5'-->3' exoribonuclease [Candida orthopsilosis Co 90-125]
gi|380353633|emb|CCG23144.1| Kem1 5'-->3' exoribonuclease [Candida orthopsilosis]
Length = 1465
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 158/401 (39%), Positives = 234/401 (58%), Gaps = 60/401 (14%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MG+P F+R++++R+PL I +++E K P EFDNLYLDMN I+
Sbjct: 1 MGIPKFFRFISERWPL-ISQLIDE----------------KQIP---EFDNLYLDMNSIL 40
Query: 61 HPCFHP-DGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRR 119
H C H DG S D ++ +IF+YIDH+F +++P+K Y+AIDGVAPRAKMNQQR RR
Sbjct: 41 HTCTHSNDGSITRISDDQMYAAIFNYIDHLFSIIKPKKTFYMAIDGVAPRAKMNQQRARR 100
Query: 120 FRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFI 179
FR A +A E L+K E +L KE P DSN ITPGT+FMA L+ L+YF+
Sbjct: 101 FRTAYEA------EINLKKAIENGDEL--PKEDP--FDSNSITPGTEFMAKLTENLKYFV 150
Query: 180 QARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIM 239
++ + W +++LS VPGEGEHKI +IR R+ G+DPN RHC+YGLDADLIM
Sbjct: 151 HKKITEDSRWANIEIVLSGHEVPGEGEHKIQEFIRAVRSQDGYDPNLRHCIYGLDADLIM 210
Query: 240 LSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIHK 299
L L +H+ HF++LRE +T + K P D +
Sbjct: 211 LGLVSHDPHFALLREEVTFGNR-------------------KSSSGPKD--------VTD 243
Query: 300 KKYQFLNIWVLREYLQYELDIPNP--PFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIR 357
+K+ L++ ++REYL+ E F +FE+++DDF+ + + +GNDFLPH+P L +
Sbjct: 244 QKFFLLHLSLVREYLELEFKEVEEQISFEYDFEKVLDDFILIMYVIGNDFLPHLPDLHLN 303
Query: 358 EGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVA 398
+GA LL+ +++ GY+ + G++ L R+ ++ ++
Sbjct: 304 KGAFPLLISTFKQSLLQSDGYINEDGKINLRRLNIWVHHLS 344
Score = 145 bits (366), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 83/185 (44%), Positives = 112/185 (60%), Gaps = 13/185 (7%)
Query: 450 GYKERYYADK--FEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAP 507
+K YY +K F I N E++ ++ + Y+EGL WV YYY+ SW ++Y YHYAP
Sbjct: 513 SWKNNYYEEKLNFSIDNKEKLTEMTE----HYIEGLQWVLYYYYRGCPSWNFYYRYHYAP 568
Query: 508 FASD----LKDL--SDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPI 561
SD L++L ++ITF +PF+PF+QLM LPA S +P YR LMTD SPI
Sbjct: 569 RISDISVGLEELIKKGVDITFEKSKPFKPFEQLMAVLPARSKKLMPAVYRPLMTDEKSPI 628
Query: 562 YKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLY 621
FYP + IDMNGK +W+ VV L F+DEK LL K +E LT EE RNS ++ +
Sbjct: 629 IGFYPHEVDIDMNGKTASWEAVVLLDFVDEKKLLDALKPIESKLTPEETKRNSYGNNIKF 688
Query: 622 V-HPQ 625
+ +PQ
Sbjct: 689 INNPQ 693
>gi|46124843|ref|XP_386975.1| hypothetical protein FG06799.1 [Gibberella zeae PH-1]
Length = 1370
Score = 293 bits (749), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 166/444 (37%), Positives = 248/444 (55%), Gaps = 68/444 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP F+RWL++RYP +I ++ E+ EFD LYLDMNGII
Sbjct: 1 MGVPKFFRWLSERYP-AISQLIAEN-------------------RIPEFDCLYLDMNGII 40
Query: 61 HPCFHPDGKPAPT---SYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRT 117
H C H D + S +++F IF+YI+H+F ++P++L ++AIDGVAPRAKMNQQR+
Sbjct: 41 HNCTHKDAGEDVSFRLSEEEMFIRIFNYIEHLFGKIKPKQLFFMAIDGVAPRAKMNQQRS 100
Query: 118 RRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQY 177
RRFR A DA +A K E ++ KE+P DSN ITPGT+FMA LS L+Y
Sbjct: 101 RRFRTALDAEKAR------DKAISEGVEI--PKEEP--FDSNCITPGTEFMAKLSQQLRY 150
Query: 178 FIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADL 237
F+ ++++ WQ +++LS VPGEGEHKIM YIR + P ++ N RHCLYGLDADL
Sbjct: 151 FVNKKVSEDTDWQGCEIVLSGHEVPGEGEHKIMEYIRNAKAQPNYNHNVRHCLYGLDADL 210
Query: 238 IMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPI 297
IML L +H+ HF +LRE +T G+ K +
Sbjct: 211 IMLGLLSHDPHFCLLREEVTF-GRASKS---------------------------KSKEL 242
Query: 298 HKKKYQFLNIWVLREYLQYEL----DIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPT 353
+ + L++ ++REYL+ E + FP + ER++DDF+ + FFVGNDFLP++P+
Sbjct: 243 EHQNFYLLHLCIVREYLEMEFQELGEEGALSFPFDLERVIDDFILMAFFVGNDFLPNLPS 302
Query: 354 LEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQ 413
L I EGA+ + +Y+ GY+ + G + + R+++ + ++ E F+ ++
Sbjct: 303 LHINEGALANMFRIYKSILPKCDGYINENGVINMGRLQRLLGELSNTEIDAFESDVSDEK 362
Query: 414 AYEYNEAMKLNARRESSEELLQAP 437
Y + ++ R E+ +AP
Sbjct: 363 WY---ASKQMEKRLENKHAETKAP 383
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 58/147 (39%), Positives = 82/147 (55%), Gaps = 17/147 (11%)
Query: 485 WVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDL--------EITFFLGEPFRPFDQLMG 536
W +YY Q W AP + D K+L+ L ++ F G+PF P++QLMG
Sbjct: 511 WKTKYYLQKFEEW--------APDSYD-KELTALYVVKGVGADLNFKKGQPFLPYEQLMG 561
Query: 537 TLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLR 596
LP S +P+ Y +LMT+P SPI FYP DF++DMNGK+ W+ V+K+PFIDEK LL
Sbjct: 562 VLPDRSKKIVPKVYHDLMTNPDSPIVDFYPRDFELDMNGKKMDWEAVIKIPFIDEKRLLD 621
Query: 597 QTKKLEVFLTEEELFRNSVMLDLLYVH 623
+ L +E RN + L + +
Sbjct: 622 AMRPKNELLEPDEKARNGFGVPLKFTY 648
>gi|254571103|ref|XP_002492661.1| Evolutionarily-conserved 5'-3' exonuclease component of cytoplasmic
processing (P) bodies [Komagataella pastoris GS115]
gi|238032459|emb|CAY70482.1| Evolutionarily-conserved 5'-3' exonuclease component of cytoplasmic
processing (P) bodies [Komagataella pastoris GS115]
gi|328353336|emb|CCA39734.1| 5'-3' exoribonuclease 1 [Komagataella pastoris CBS 7435]
Length = 1451
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 158/410 (38%), Positives = 239/410 (58%), Gaps = 61/410 (14%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MG+P F+R++++R+P+ ++ P++ S+ EFDNLYLDMN I+
Sbjct: 1 MGIPKFFRYISERWPM----------------ISEPIEDSQI----AEFDNLYLDMNSIL 40
Query: 61 HPCFHP-DGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRR 119
H C H DG +++F +IF YI+H+F L++P K ++AIDGVAPRAKMNQQR+RR
Sbjct: 41 HNCTHSNDGSVDLMKEEEMFSAIFAYIEHLFTLIKPGKTFFMAIDGVAPRAKMNQQRSRR 100
Query: 120 FRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFI 179
FR A +A ++ E + L+++K+ E DSN ITPGT+FMA ++ L++FI
Sbjct: 101 FRTAIEAEKS--------VEIAQKNGLITSKD--ENFDSNCITPGTEFMAKVTTNLKFFI 150
Query: 180 QARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIM 239
+++ WQ +VILS VPGEGEHKIM YIR + G+DPNTRHC+YGLDADLIM
Sbjct: 151 HQKISSDAKWQKVQVILSGHEVPGEGEHKIMDYIRFLKAQEGYDPNTRHCIYGLDADLIM 210
Query: 240 LSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIHK 299
L L H+ HF+ILRE + G+ K T + +
Sbjct: 211 LGLVIHDPHFAILREEVVF-GRGSKA---------------------------SSTDVSE 242
Query: 300 KKYQFLNIWVLREYLQYEL-DIPNP-PFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIR 357
+++ L++ +LREYL E D+ + F + ERI+DDF+F+ + +GNDFLP++P L I
Sbjct: 243 QQFYLLHLSLLREYLALEFKDLEDQIKFDYDLERILDDFIFIMYVIGNDFLPNLPDLHIN 302
Query: 358 EGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQK 407
+GA L+ + GYL + G + ++R ++ ++ +E Q F++
Sbjct: 303 KGAFPRLLATIKETMIDSDGYLQEGGVINMERFGLWLDHLSQFELQNFEQ 352
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 82/179 (45%), Positives = 113/179 (63%), Gaps = 7/179 (3%)
Query: 450 GYKERYYADKF--EISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAP 507
+K +YY +KF +S+ E+I K+ + Y++GL WV YYY+ V SWQW+YPY+YAP
Sbjct: 514 NWKNKYYKEKFGFTLSDTEDILKLTES----YIQGLQWVLFYYYRGVPSWQWYYPYYYAP 569
Query: 508 FASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPP 567
SD+K + F G PF+PF+QLM LPA S +P YR LMTDP+SPI +FYP
Sbjct: 570 RISDIKLGIKACLEFDKGTPFKPFEQLMAVLPARSKQLVPACYRPLMTDPNSPIIEFYPD 629
Query: 568 DFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYV-HPQ 625
+ +ID NGK +W+ VVK+ F+DEK LL + L EE RNS+ ++ + HPQ
Sbjct: 630 EVEIDKNGKTASWEAVVKINFVDEKRLLEALEPYNSKLNAEERQRNSLGTNIEFSYHPQ 688
>gi|448107259|ref|XP_004205309.1| Piso0_003552 [Millerozyma farinosa CBS 7064]
gi|448110212|ref|XP_004201573.1| Piso0_003552 [Millerozyma farinosa CBS 7064]
gi|359382364|emb|CCE81201.1| Piso0_003552 [Millerozyma farinosa CBS 7064]
gi|359383129|emb|CCE80436.1| Piso0_003552 [Millerozyma farinosa CBS 7064]
Length = 1508
Score = 292 bits (748), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 161/412 (39%), Positives = 239/412 (58%), Gaps = 63/412 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MG+P F+R++++R+PL +DG + EFDNLYLDMN I+
Sbjct: 1 MGIPKFFRFISERWPLI-------SQLIDGTQIP-------------EFDNLYLDMNSIL 40
Query: 61 HPCFHP-DGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRR 119
H C H D + D ++ +IF YI+H+F +++P K+ Y+AIDGVAPRAKMNQQR RR
Sbjct: 41 HTCTHSNDDTLVRMTEDQMYAAIFTYIEHLFEIIKPNKVFYMAIDGVAPRAKMNQQRARR 100
Query: 120 FRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFI 179
FR A +A E L+K ++ ++ KE P DSN ITPGT+FMA L+ L+YFI
Sbjct: 101 FRTAYEA------ELNLKKAIQDGAEI--PKEDP--FDSNAITPGTEFMAKLTDNLKYFI 150
Query: 180 QARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIM 239
++ + W ++ILS VPGEGEHKIM YIR +N P +PN RHC+YGLDADLIM
Sbjct: 151 HKKITEDSRWANVQIILSGHEVPGEGEHKIMEYIRTMKNQPDAEPNLRHCIYGLDADLIM 210
Query: 240 LSLATHEIHFSILREVITL-PGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
L L +H HF++LRE +T P Q+K + I+
Sbjct: 211 LGLVSHYPHFALLREEVTFGPRSQKKS-----------------------------SDIN 241
Query: 299 KKKYQFLNIWVLREYLQYEL-DIPNP-PFPINFERIVDDFVFLCFFVGNDFLPHMPTLEI 356
+K+ L++ +LREYL E D+ F NFER++DDF+ + + +GNDFLP++P L +
Sbjct: 242 DQKFYLLHLSLLREYLSLEFRDLDTELNFEYNFERVLDDFILIMYVIGNDFLPNLPDLHL 301
Query: 357 REGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKR 408
+GA L++ +++ GYL + G + L R++ ++ ++ +E + F+K+
Sbjct: 302 NKGAFPLILETFKQALRQCDGYLNENGTINLKRLDIWLHILSEFELENFEKQ 353
Score = 155 bits (392), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 90/205 (43%), Positives = 121/205 (59%), Gaps = 16/205 (7%)
Query: 430 SEELLQAPVAVADTVKLGEPGYKERYYADK--FEISNPEEIDKVKKDVVLKYVEGLCWVC 487
+E+LL+ V D+ + +K++YY +K F I++ E + D+ YVEGL WV
Sbjct: 495 TEDLLKESKDVYDSKFMN---WKDQYYKEKVHFSINDKENL----VDMTQNYVEGLQWVL 547
Query: 488 RYYYQDVCSWQWFYPYHYAPFASDLKD------LSDLEITFFLGEPFRPFDQLMGTLPAA 541
YYY+ SW WFY YHYAP SD+ ++ +I F PF+PF+QLM LPA
Sbjct: 548 YYYYKGCPSWNWFYRYHYAPRISDIHVGVEEYVKTNHKIKFEKSTPFKPFEQLMAVLPAR 607
Query: 542 SSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKL 601
S +P YR LMTDP+SP+ FYP + IDMNGK+ +W+ VV L F+DEK LL K
Sbjct: 608 SRKLMPIVYRQLMTDPASPLIDFYPAEVDIDMNGKKASWEAVVLLSFVDEKRLLDALKPF 667
Query: 602 EVFLTEEELFRNSVMLDLLYV-HPQ 625
E LT EE RNS DL ++ +PQ
Sbjct: 668 EQKLTIEEKRRNSFGTDLRFIFNPQ 692
>gi|408388369|gb|EKJ68055.1| hypothetical protein FPSE_11866 [Fusarium pseudograminearum CS3096]
Length = 1391
Score = 292 bits (748), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 163/429 (37%), Positives = 241/429 (56%), Gaps = 65/429 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP F+RWL++RYP +I ++ E+ EFD LYLDMNGII
Sbjct: 1 MGVPKFFRWLSERYP-AISQLIAEN-------------------RIPEFDCLYLDMNGII 40
Query: 61 HPCFHPDGKPAPT---SYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRT 117
H C H D + S +++F IF+YI+H+F ++P++L ++AIDGVAPRAKMNQQR+
Sbjct: 41 HNCTHKDAGEDVSFRLSEEEMFIRIFNYIEHLFGKIKPKQLFFMAIDGVAPRAKMNQQRS 100
Query: 118 RRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQY 177
RRFR A DA +A K E ++ KE+P DSN ITPGT+FMA LS L+Y
Sbjct: 101 RRFRTALDAEKAR------DKAISEGVEI--PKEEP--FDSNCITPGTEFMAKLSQQLRY 150
Query: 178 FIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADL 237
F+ ++++ WQ +++LS VPGEGEHKIM YIR + P ++ N RHCLYGLDADL
Sbjct: 151 FVNKKVSEDTDWQGCEIVLSGHEVPGEGEHKIMEYIRNAKAQPNYNHNVRHCLYGLDADL 210
Query: 238 IMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPI 297
IML L +H+ HF +LRE +T G+ K +
Sbjct: 211 IMLGLLSHDPHFCLLREEVTF-GRASKS---------------------------KSKEL 242
Query: 298 HKKKYQFLNIWVLREYLQYEL----DIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPT 353
+ + L++ ++REYL+ E + FP + ER++DDF+ + FFVGNDFLP++P+
Sbjct: 243 EHQNFYLLHLCIVREYLEMEFQELGEEGTLSFPFDLERVIDDFILMAFFVGNDFLPNLPS 302
Query: 354 LEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQ 413
L I EGA+ + +Y+ GY+ + G + + R+++ + ++ E F+ ++
Sbjct: 303 LHINEGALANMFRIYKSILPKCDGYINENGVINMGRLQRLLGELSNTEIDAFENDVSDEK 362
Query: 414 AYEYNEAMK 422
Y + K
Sbjct: 363 WYASKQMEK 371
Score = 128 bits (322), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 70/174 (40%), Positives = 95/174 (54%), Gaps = 18/174 (10%)
Query: 450 GYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFA 509
G+K +YY KFE P+ DK + YV+GL WV YYY+DV
Sbjct: 511 GWKTKYYLQKFEEWAPDSYDKELTALCENYVQGLQWVLYYYYRDVVKG----------VG 560
Query: 510 SDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDF 569
+DL F G+PF P++QLMG LP S +P+ Y +LMT+P SPI FYP DF
Sbjct: 561 ADL--------NFKKGQPFLPYEQLMGVLPDRSKKIVPKVYHDLMTNPDSPIVDFYPRDF 612
Query: 570 QIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVH 623
++DMNGK+ W+ V+K+PFIDEK LL + L +E RN + L + +
Sbjct: 613 ELDMNGKKMDWEAVIKIPFIDEKRLLDAMRPKNELLEPDEKARNGFGVPLKFTY 666
>gi|406601833|emb|CCH46556.1| 5'-3' exoribonuclease 1 [Wickerhamomyces ciferrii]
Length = 1519
Score = 292 bits (747), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 156/411 (37%), Positives = 239/411 (58%), Gaps = 63/411 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MG+P F+R++++R+PL +DG + EFDNLYLDMN I+
Sbjct: 1 MGIPKFFRFISERWPLI-------SQLIDGNQIP-------------EFDNLYLDMNSIL 40
Query: 61 HPCFHPDGKPAPT--SYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C P + S ++VF +IF YIDH+F ++P+++ Y+AIDGVAPRAKMNQQR R
Sbjct: 41 HTCTRPKDEDVTKRLSEEEVFSAIFAYIDHLFDTIKPKEVFYMAIDGVAPRAKMNQQRAR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RFR A DA E+ L K +E ++ K E DSN ITPGT+FMA L+ L+YF
Sbjct: 101 RFRTAVDA------EKNLEKAIKEGTEI----PKDEPFDSNSITPGTEFMAKLTRYLKYF 150
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
I +++ WQ ++ILS VPGEGEHKIM +IR ++ ++PN RHC+YGLDADLI
Sbjct: 151 IHKKVSTDSRWQNVQIILSGHEVPGEGEHKIMEFIRTKKASKDYNPNLRHCIYGLDADLI 210
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
ML L +HE HF++LRE +T +Q + +
Sbjct: 211 MLGLVSHEPHFALLREEVTFGRRQTQP-----------------------------KTVE 241
Query: 299 KKKYQFLNIWVLREYLQYEL-DIPNP-PFPINFERIVDDFVFLCFFVGNDFLPHMPTLEI 356
++K+ L++ ++REYL+ E D+ F +FER++DDF+ + + +GNDFLP++P L +
Sbjct: 242 EQKFYLLHLSLVREYLELEFQDLKETISFDYDFERVLDDFILIMYVIGNDFLPNLPDLHL 301
Query: 357 REGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQK 407
+GA LL+ ++ + GY+ + G++ L R+ ++ ++ +E + F++
Sbjct: 302 NKGAFPLLIETFKEALRNLDGYINEFGKINLKRLGSWLDILSKFEVENFEQ 352
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 108/283 (38%), Positives = 149/283 (52%), Gaps = 9/283 (3%)
Query: 349 PHMPTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKR 408
P+ P + + +INL + V + + D G +++ + SV + D I
Sbjct: 406 PNGPVEDEQIPSINLPVDVVENNLDFLKDFAFDTGLIIIHSKNENTYSVKLDIDGIDPHE 465
Query: 409 TRIQQAYEYNEAMKLNARRESSEELLQAP---VAVADTVKLGEP--GYKERYYADKFEIS 463
T + N+ ++ R E++ +L A VA V E +K+ YY +K E S
Sbjct: 466 TEEEFNERVNDTRRIIKRYEAAI-ILDAEGEDVAEERQVIYNEKFENWKDNYYKEKLEFS 524
Query: 464 NPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDLEITFF 523
+E DK++ ++ YVEGL WV YYY+ V SW W+Y YHYAP SD+K D+ I
Sbjct: 525 IKDE-DKLR-ELTENYVEGLQWVLFYYYKGVQSWPWYYRYHYAPRISDIKKGLDVIINLE 582
Query: 524 LGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGV 583
G PFRPF+QLM LPA S +P YR LMT+P+SPI FYP D + DMNGK W+ V
Sbjct: 583 KGTPFRPFEQLMAVLPARSRQLVPAVYRPLMTEPNSPIIDFYPSDVETDMNGKTAEWEAV 642
Query: 584 VKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYV-HPQ 625
VKL F+D L K LT EE RNS D+L+ +PQ
Sbjct: 643 VKLSFVDPDRLKDAMKPHNAELTPEEKQRNSFGSDILFTFNPQ 685
>gi|410730385|ref|XP_003671372.2| hypothetical protein NDAI_0G03520 [Naumovozyma dairenensis CBS 421]
gi|401780190|emb|CCD26129.2| hypothetical protein NDAI_0G03520 [Naumovozyma dairenensis CBS 421]
Length = 1548
Score = 291 bits (746), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 161/411 (39%), Positives = 238/411 (57%), Gaps = 62/411 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MG+P F+R++++R+P+ I+ ++E G P EFDNLYLDMN I+
Sbjct: 1 MGIPKFFRYISERWPM-ILQLIE--------GTQIP-----------EFDNLYLDMNSIL 40
Query: 61 HPCFH--PDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C H D + ++VF IF YIDH+F ++P+K+ Y+AIDGVAPRAKMNQQR+R
Sbjct: 41 HTCTHGNDDDVTKRMTEEEVFAKIFTYIDHLFQTIKPKKVFYMAIDGVAPRAKMNQQRSR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RFR A DA A L+K E ++ K E DSN ITPGT+FMA L+ L+YF
Sbjct: 101 RFRTAMDAENA------LQKALENGEEI----PKGEPFDSNSITPGTEFMAKLTKNLKYF 150
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
I +++ W+ ++I S PGEGEHKIM +IR R GFD NTRHC+YGLDADLI
Sbjct: 151 IHEKISNDAQWREVEIIFSGHEAPGEGEHKIMDFIRTLRAQKGFDHNTRHCIYGLDADLI 210
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
+L L+TH HF++LRE + G+ N A +
Sbjct: 211 ILGLSTHAPHFALLREEVVF---------------------GRRNPNQA-------KTLE 242
Query: 299 KKKYQFLNIWVLREYLQYEL-DIPNP-PFPINFERIVDDFVFLCFFVGNDFLPHMPTLEI 356
+ + L++ +LREY++ E +I + F +FER++DDFV + F +GNDFLP++P L +
Sbjct: 243 NQNFYLLHLSLLREYMELEFKEIADEMQFEFDFERVLDDFVLVMFVIGNDFLPNLPDLHL 302
Query: 357 REGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQK 407
+GA +L+ ++ GY+ + G++ L+R+ ++Q ++ +E F+K
Sbjct: 303 NKGAFVVLLQTFKEALLHSDGYINEHGKINLERLRVWLQYLSQFELMNFEK 353
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 82/195 (42%), Positives = 105/195 (53%), Gaps = 16/195 (8%)
Query: 450 GYKERYYADK--FEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAP 507
+K+ YY DK F+ E I K+ K+ YVEGL WV YYY+ SW W+Y YHYAP
Sbjct: 510 SWKKDYYKDKLGFKADIEENITKLTKN----YVEGLQWVLYYYYRGCPSWGWYYRYHYAP 565
Query: 508 FASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPP 567
SDL+ D I F PF+PF+QLM LP S + +P R LM DP SPI FYP
Sbjct: 566 RISDLEKGLDQVIEFAKDNPFKPFEQLMSVLPERSKNLIPPVLRPLMYDPKSPILDFYPT 625
Query: 568 DFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSV----------ML 617
+ ++D NGK W+ VV LPF+DE L+ K L+ EE RNS +
Sbjct: 626 EVKLDKNGKTADWEAVVLLPFVDETRLIDAMKPYLSKLSPEEKARNSFGKPLTFTFNPQV 685
Query: 618 DLLYVHPQHPLYQQI 632
DL+Y P L+ +
Sbjct: 686 DLVYKSPLSGLFSDL 700
>gi|426199678|gb|EKV49603.1| hypothetical protein AGABI2DRAFT_184268 [Agaricus bisporus var.
bisporus H97]
Length = 1454
Score = 291 bits (746), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 154/364 (42%), Positives = 217/364 (59%), Gaps = 53/364 (14%)
Query: 48 EFDNLYLDMNGIIHPCFHPDGKPA--PTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDG 105
EFDNLYLD NGIIH C HP+ + A S D +F SIF Y+DH+F ++P+KL ++A+DG
Sbjct: 33 EFDNLYLDFNGIIHNCSHPNDEDAHFRLSEDQIFTSIFAYVDHLFGKIKPKKLFFMAVDG 92
Query: 106 VAPRAKMNQQRTRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGT 165
VAPRAKMNQQR+RRFR AK+A + +R++ E+ G+ L ++ DSN ITPGT
Sbjct: 93 VAPRAKMNQQRSRRFRTAKEAKD-------VREKAEKKGEKLPDEK---AFDSNCITPGT 142
Query: 166 QFMAVLSAALQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPN 225
FMA LS L+YF+ ++++ W+ +V+LS VPGEGEHKIM YIRL R P ++PN
Sbjct: 143 LFMARLSEQLRYFVNKKISEDANWRDIEVVLSGHEVPGEGEHKIMEYIRLSRAQPDYNPN 202
Query: 226 TRHCLYGLDADLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDN 285
RHCLYGLDADLIML L +H+ HF +LRE + L
Sbjct: 203 IRHCLYGLDADLIMLGLLSHDPHFCLLREEVNL--------------------------- 235
Query: 286 PADWNGVDDTPIHKKKYQFLNIWVLREYLQYEL-DIPNP-PFPINFERIVDDFVFLCFFV 343
+ L++ ++REYL E DI + PF + ER++DDF+ L FV
Sbjct: 236 ------------ESVNFYLLHLCLMREYLDLEFRDIESTLPFGYSLERVIDDFILLAVFV 283
Query: 344 GNDFLPHMPTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQ 403
GNDFLP++P L I E + L VY++ + GY+ + G + + R++ + +A +E
Sbjct: 284 GNDFLPNLPDLHIHENGLEKLFEVYKKVLPGLEGYINEGGVINVKRLQVILDEMARWEQD 343
Query: 404 IFQK 407
+F+K
Sbjct: 344 VFEK 347
Score = 173 bits (439), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 86/164 (52%), Positives = 105/164 (64%), Gaps = 2/164 (1%)
Query: 451 YKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFAS 510
+K YY K EIS + K D+V +YVEGL WV YYY V SW WFY YHYAP S
Sbjct: 547 WKRGYYQGKMEISYDDP--KGMGDLVYRYVEGLQWVMHYYYSGVASWGWFYNYHYAPRIS 604
Query: 511 DLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQ 570
DL+ + + F LG PF+PF QLMG LP+AS +PE YR LM DP+SPI FYP +F+
Sbjct: 605 DLRGVDKMTFNFELGTPFKPFQQLMGVLPSASMELIPEPYRELMYDPNSPILDFYPVEFE 664
Query: 571 IDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNS 614
D+NGK+ W+ +VK+PFIDE LL+ E LT EE RNS
Sbjct: 665 SDLNGKKAEWEAIVKIPFIDEVRLLKAMATREHRLTTEERKRNS 708
>gi|226294212|gb|EEH49632.1| 5'-3' exoribonuclease [Paracoccidioides brasiliensis Pb18]
Length = 1445
Score = 291 bits (746), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 165/413 (39%), Positives = 237/413 (57%), Gaps = 66/413 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP F+RW+++RYP +I ++ E+ EFD LYLDMNGII
Sbjct: 1 MGVPKFFRWMSERYP-AISQLIAEN-------------------RIPEFDCLYLDMNGII 40
Query: 61 HPCFHPDGKPAPT---SYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRT 117
H C H D +PT + D +F +IF+YI+H++ ++P+KL ++AIDGVAPRAKMNQQR
Sbjct: 41 HNCTHRDSD-SPTFRMTEDKMFIAIFNYIEHLYGKIKPKKLFFMAIDGVAPRAKMNQQRA 99
Query: 118 RRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQY 177
RRFR A DA A+ E+A K K DSN ITPGT+FMA L+ L+Y
Sbjct: 100 RRFRTAYDAEVAK----------EKAIKQGIEMPKEAAFDSNCITPGTEFMAKLTQQLKY 149
Query: 178 FIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADL 237
FI ++++ WQ +++LS VPGEGEHKIM YIR + PG+ P+ RHCLYGLDADL
Sbjct: 150 FINKKVSEDVEWQGVEIVLSGHEVPGEGEHKIMEYIRQTKAQPGYHPDVRHCLYGLDADL 209
Query: 238 IMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPI 297
IML L +H+ HF +LRE +T Q +K +
Sbjct: 210 IMLGLLSHDPHFCLLREEVTFGRQSQK----------------------------KSKEL 241
Query: 298 HKKKYQFLNIWVLREYLQYELDIPNPP----FPINFERIVDDFVFLCFFVGNDFLPHMPT 353
+ + +++ ++REYL+ E FP + ERI+DDF+ + FFVGNDFLP++P
Sbjct: 242 EHQNFYLMHLCMVREYLELEFQELEEEDALQFPFDLERIIDDFILMAFFVGNDFLPNLPN 301
Query: 354 LEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQ 406
L I EGA+ + +Y++ +GGY+ + G + L+R+ + S++ E + F+
Sbjct: 302 LHINEGALAWMFKIYKQVLPKLGGYINEQGTINLERLGILLDSLSDVEFRFFE 354
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 82/175 (46%), Positives = 107/175 (61%), Gaps = 6/175 (3%)
Query: 451 YKERYYADKFE--ISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPF 508
+K YY KF + N EE+ K+ ++ YV+GL WV YYY+ V SW WFY YHY+P
Sbjct: 519 WKNNYYKSKFRWGMDNHEEMRKLTEN----YVQGLQWVLYYYYRGVASWPWFYQYHYSPM 574
Query: 509 ASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPD 568
SD+K ++ F LG+PF PF QLMG LP S +P + LMT P SPI FYP D
Sbjct: 575 ISDVKLGLKADMNFDLGQPFHPFQQLMGVLPDRSKQIVPAAFHELMTSPESPIIDFYPRD 634
Query: 569 FQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVH 623
F++DMNGK+ W+ VVK+PFI+EK LL+ E LT EE RN + L + +
Sbjct: 635 FELDMNGKKMDWEAVVKIPFIEEKRLLKAMATKEHLLTPEEKARNEFGVTLKFTY 689
>gi|354545919|emb|CCE42648.1| hypothetical protein CPAR2_202910 [Candida parapsilosis]
Length = 1481
Score = 291 bits (746), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 158/401 (39%), Positives = 233/401 (58%), Gaps = 60/401 (14%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MG+P F+R++++R+PL I +V+E K P EFDNLYLDMN I+
Sbjct: 1 MGIPKFFRFISERWPL-ISQLVDE----------------KQIP---EFDNLYLDMNSIL 40
Query: 61 HPCFHP-DGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRR 119
H C H DG S D ++ +IF+YIDH+F +++P+K Y+AIDGVAPRAKMNQQR RR
Sbjct: 41 HTCTHSNDGSITRISDDQMYAAIFNYIDHLFSIIKPKKTFYMAIDGVAPRAKMNQQRARR 100
Query: 120 FRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFI 179
FR A +A E L+K E +L KE P DSN ITPGT+FMA L+ L+YF+
Sbjct: 101 FRTAYEA------EINLKKAIENGDEL--PKEDP--FDSNSITPGTEFMAKLTENLKYFV 150
Query: 180 QARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIM 239
++ + W +++LS VPGEGEHKI +IR R+ +DPN RHC+YGLDADLIM
Sbjct: 151 HKKITEDSRWANIEIVLSGHEVPGEGEHKIQEFIRAVRSQDDYDPNLRHCIYGLDADLIM 210
Query: 240 LSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIHK 299
L L +H+ HF++LRE +T + K P D +
Sbjct: 211 LGLVSHDPHFALLREEVTFGNR-------------------KTSSGPKD--------VTD 243
Query: 300 KKYQFLNIWVLREYLQYELD--IPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIR 357
+K+ L++ ++REYL+ E F +FE+++DDF+ + + +GNDFLPH+P L +
Sbjct: 244 QKFYLLHLSLVREYLELEFKEVEEQVDFEYDFEKVLDDFILIMYVIGNDFLPHLPDLHLN 303
Query: 358 EGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVA 398
+GA LL+ +++ GY+ + G++ L R+ ++ ++
Sbjct: 304 KGAFPLLLSTFKQSLLQSDGYINEEGKINLRRLNIWVHHLS 344
Score = 138 bits (348), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 81/184 (44%), Positives = 111/184 (60%), Gaps = 13/184 (7%)
Query: 451 YKERYYADK--FEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPF 508
+K YY +K F I + E++ ++ + YVEGL WV YYY+ SW ++Y YHYAP
Sbjct: 514 WKNNYYEEKLHFPIDDKEKLIEMTE----HYVEGLQWVLYYYYRGCPSWNFYYKYHYAPR 569
Query: 509 ASD----LKDL--SDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIY 562
SD L++L ++ITF +PF+PF+QLM LPA S +P Y LMTD SPI
Sbjct: 570 ISDVSLGLEELIKKGVDITFEKSKPFKPFEQLMAVLPARSKKLMPAAYWPLMTDEKSPII 629
Query: 563 KFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYV 622
FYP + IDMNGK +W+ VV L F+DEK LL K +E LT +E RNS ++ ++
Sbjct: 630 DFYPHEVDIDMNGKTASWEAVVLLDFVDEKKLLDALKPIESKLTPQETKRNSYGHNIKFI 689
Query: 623 -HPQ 625
+PQ
Sbjct: 690 NNPQ 693
>gi|225684905|gb|EEH23189.1| 5'-3' exoribonuclease [Paracoccidioides brasiliensis Pb03]
Length = 1445
Score = 291 bits (745), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 165/413 (39%), Positives = 237/413 (57%), Gaps = 66/413 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP F+RW+++RYP +I ++ E+ EFD LYLDMNGII
Sbjct: 1 MGVPKFFRWMSERYP-AISQLIAEN-------------------RIPEFDCLYLDMNGII 40
Query: 61 HPCFHPDGKPAPT---SYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRT 117
H C H D +PT + D +F +IF+YI+H++ ++P+KL ++AIDGVAPRAKMNQQR
Sbjct: 41 HNCTHRDSD-SPTFRMTEDKMFIAIFNYIEHLYGKIKPKKLFFMAIDGVAPRAKMNQQRA 99
Query: 118 RRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQY 177
RRFR A DA A+ E+A K K DSN ITPGT+FMA L+ L+Y
Sbjct: 100 RRFRTAYDAEVAK----------EKAIKQGIEMPKEAAFDSNCITPGTEFMAKLTQQLKY 149
Query: 178 FIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADL 237
FI ++++ WQ +++LS VPGEGEHKIM YIR + PG+ P+ RHCLYGLDADL
Sbjct: 150 FINKKVSEDVEWQGVEIVLSGHEVPGEGEHKIMEYIRQTKAQPGYHPDVRHCLYGLDADL 209
Query: 238 IMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPI 297
IML L +H+ HF +LRE +T Q +K +
Sbjct: 210 IMLGLLSHDPHFCLLREEVTFGRQSQK----------------------------KSKEL 241
Query: 298 HKKKYQFLNIWVLREYLQYELDIPNPP----FPINFERIVDDFVFLCFFVGNDFLPHMPT 353
+ + +++ ++REYL+ E FP + ERI+DDF+ + FFVGNDFLP++P
Sbjct: 242 EHQNFYLMHLCMVREYLELEFQELEEEDALQFPFDLERIIDDFILMAFFVGNDFLPNLPN 301
Query: 354 LEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQ 406
L I EGA+ + +Y++ +GGY+ + G + L+R+ + S++ E + F+
Sbjct: 302 LHINEGALAWMFKIYKQVLPKLGGYINEQGTINLERLGILLDSLSDVEFRFFE 354
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 82/175 (46%), Positives = 107/175 (61%), Gaps = 6/175 (3%)
Query: 451 YKERYYADKFE--ISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPF 508
+K YY KF + N EE+ K+ ++ YV+GL WV YYY+ V SW WFY YHY+P
Sbjct: 519 WKNNYYKSKFRWGMDNHEEMRKLTEN----YVQGLQWVLYYYYRGVASWPWFYQYHYSPM 574
Query: 509 ASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPD 568
SD+K ++ F LG+PF PF QLMG LP S +P + LMT P SPI FYP D
Sbjct: 575 ISDVKLGLKADMNFDLGQPFHPFQQLMGVLPDRSKQIVPAAFHELMTSPESPIIDFYPRD 634
Query: 569 FQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVH 623
F++DMNGK+ W+ VVK+PFI+EK LL+ E LT EE RN + L + +
Sbjct: 635 FELDMNGKKMDWEAVVKIPFIEEKRLLKAMATKEHLLTPEEKARNEFGVTLKFTY 689
>gi|353234672|emb|CCA66695.1| probable KEM1-5`-3` exonuclease component of cytoplasmic processing
(P) bodies [Piriformospora indica DSM 11827]
Length = 1438
Score = 290 bits (742), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 160/387 (41%), Positives = 221/387 (57%), Gaps = 60/387 (15%)
Query: 40 SKPNPNGMEFDNLYLDMNGIIHPCFHPDGKPA--PTSYDDVFKSIFDYIDHIFLLVRPRK 97
+K NP DNLY+D NGIIH C HP+ S + +F SIF Y++H+F ++PRK
Sbjct: 3 TKQNPI---LDNLYVDFNGIIHNCSHPNDGDVHFRLSEEQIFTSIFAYVEHLFTKIKPRK 59
Query: 98 LLYLAIDGVAPRAKMNQQRTRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCD 157
+ ++AIDGVAPRAKMNQQR+RRFR AK+ ++ + K + KL K D
Sbjct: 60 VFFMAIDGVAPRAKMNQQRSRRFRTAKET------KDLVEKALRKGEKLPDEK----AFD 109
Query: 158 SNVITPGTQFMAVLSAALQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQR 217
SN ITPGT FMA LS LQYF+ ++ + W+ +VILS VPGEGEHKIM YIRL +
Sbjct: 110 SNCITPGTPFMARLSLQLQYFVNKKITEDSNWRDVQVILSGHEVPGEGEHKIMEYIRLSK 169
Query: 218 NLPGFDPNTRHCLYGLDADLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAE 277
++PNTRHCLYGLDADLIML L +H+ HF++LRE + Q +K
Sbjct: 170 AQKDYNPNTRHCLYGLDADLIMLGLLSHDPHFALLREEVKFGPQAKK------------- 216
Query: 278 CHGKPGDNPADWNGVDDTPIHKKKYQFLNIWVLREYLQYE---------LDIPNP----- 323
K G + + + L++ + REYL E ++I +P
Sbjct: 217 ---KSGT------------LETQSFFLLHLCLFREYLNLEFQPLWDPKAINIADPSASSK 261
Query: 324 ---PFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHVYRREFTAMGGYLT 380
PF + ERI+DDF+ L FVGNDFLPH+P L I + A+ +L YR GGYL
Sbjct: 262 PILPFEYSLERIIDDFILLAVFVGNDFLPHLPDLHIHDNALEVLFEKYRETLPKAGGYLN 321
Query: 381 DAGEVLLDRVEKFIQSVAVYEDQIFQK 407
++G + +R++ + ++A +E Q F+K
Sbjct: 322 ESGVINTERLQMVLDALATFEQQAFEK 348
Score = 182 bits (462), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 89/183 (48%), Positives = 120/183 (65%), Gaps = 6/183 (3%)
Query: 443 TVKLGEPGYKERYYADKFEIS--NPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWF 500
T+K +K +YY +K EI + E +DK+ V +Y+EGL WV YYY V SW WF
Sbjct: 504 TLKARMDNWKRQYYQEKLEIKYDDKEAMDKL----VYRYIEGLQWVMHYYYSGVASWGWF 559
Query: 501 YPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSP 560
Y YHYAP SDLK + ++ F LG PFRP++QLMG LPAAS +P+ YR+LM DP+SP
Sbjct: 560 YDYHYAPRISDLKGVDKMKFDFKLGIPFRPYEQLMGVLPAASQEHIPQAYRDLMYDPTSP 619
Query: 561 IYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLL 620
I FYP DF+ D+NGK+ W+ +VK+PFI+E+ LL+ E LT+EE RN+V L
Sbjct: 620 ILDFYPTDFESDLNGKKQEWEAIVKIPFINEQRLLQAMASREHRLTKEEKERNTVGTSLT 679
Query: 621 YVH 623
+ +
Sbjct: 680 FTY 682
>gi|367015260|ref|XP_003682129.1| hypothetical protein TDEL_0F01070 [Torulaspora delbrueckii]
gi|359749791|emb|CCE92918.1| hypothetical protein TDEL_0F01070 [Torulaspora delbrueckii]
Length = 1471
Score = 289 bits (740), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 163/411 (39%), Positives = 235/411 (57%), Gaps = 63/411 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MG+P F+R++++R+PL I+ ++E G P EFDNLYLDMN I+
Sbjct: 1 MGIPKFFRYISERWPL-ILQLIE--------GSQIP-----------EFDNLYLDMNSIL 40
Query: 61 HPCFH--PDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C H D + ++VF I+ YIDH+F ++P+K+ Y+AIDGVAPRAKMNQQR R
Sbjct: 41 HNCTHGNDDDVTKRMTEEEVFAKIYAYIDHLFHTIKPKKVFYMAIDGVAPRAKMNQQRAR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RFR A DA +A FE+A K E DSN ITPGT+FMA L+ LQYF
Sbjct: 101 RFRTAMDAEKA----------FEKAVANGEEIPKGEPFDSNSITPGTEFMAKLTKNLQYF 150
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
I ++ W+ VI S VPGEGEHKIM +IR R FD NTRHC+YGLDADLI
Sbjct: 151 IHDKITNDSKWRDIDVIFSGHEVPGEGEHKIMDFIRNLRAQKDFDSNTRHCIYGLDADLI 210
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
ML L+ H+ HF++LRE + V G+ A +
Sbjct: 211 MLGLSVHDPHFALLREEV----------VFGRRSSTAKS-------------------LE 241
Query: 299 KKKYQFLNIWVLREYLQYEL-DIPNP-PFPINFERIVDDFVFLCFFVGNDFLPHMPTLEI 356
+ + L+I +LREY+Q E +I + F +FERI+DDF+ + F +GNDFLP++P L +
Sbjct: 242 NQNFYLLHISILREYMQLEFQEIADELQFDYDFERILDDFILVMFVIGNDFLPNLPDLHL 301
Query: 357 REGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQK 407
+GA +L+ ++ + GY+ + G++ L+R+ +++ ++ +E F++
Sbjct: 302 NKGAFPVLLQTFKEALLHVDGYINEHGQINLERLGVWLEYLSKFEQMNFER 352
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 75/171 (43%), Positives = 97/171 (56%), Gaps = 2/171 (1%)
Query: 451 YKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFAS 510
+K++YY DK S E +K+ K + YVEGL WV YYY+ SW W+Y +HY+P S
Sbjct: 510 WKDKYYKDKLGFSF-NETEKLTK-LCQNYVEGLQWVLYYYYRGCQSWGWYYRHHYSPRIS 567
Query: 511 DLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQ 570
DLK D I+F G PF PF QLM LP S + +P R LM + +SPI FYP +
Sbjct: 568 DLKLGLDQVISFEKGHPFTPFQQLMAVLPERSKNLIPTALRPLMFNENSPIRDFYPKEVD 627
Query: 571 IDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLY 621
+D NGK W+ VV L F+DE L+ L+ EE RN V DL+Y
Sbjct: 628 LDKNGKTADWEAVVLLSFVDEHRLIDAMAPYLPRLSPEEKVRNGVGKDLIY 678
>gi|363756508|ref|XP_003648470.1| hypothetical protein Ecym_8383 [Eremothecium cymbalariae
DBVPG#7215]
gi|356891670|gb|AET41653.1| Hypothetical protein Ecym_8383 [Eremothecium cymbalariae
DBVPG#7215]
Length = 1479
Score = 289 bits (739), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 156/411 (37%), Positives = 240/411 (58%), Gaps = 64/411 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MG+P F+R++++R+P +I ++ DG ++ EFD LYLDMN I+
Sbjct: 1 MGIPKFFRYISERWP-NISQLL------DGSQIS-------------EFDTLYLDMNSIL 40
Query: 61 HPCFHPDGKPAPT--SYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C H + S ++V+ IF YIDH+F ++P+++ Y+AIDGVAPRAKMNQQR+R
Sbjct: 41 HTCTHGNDADVTKRLSEEEVYLKIFTYIDHLFRTIKPKEVFYMAIDGVAPRAKMNQQRSR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RFR A DA +A L+K E ++ S E DSN ITPGT+FMA L+ L+YF
Sbjct: 101 RFRTAMDAEKA------LKKAIENGEEIPSG----EPFDSNCITPGTEFMAKLTKNLKYF 150
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
I +++ W+ VILS VPGEGEHKIM +IR+ R+ ++PNTRHC+YGLDADLI
Sbjct: 151 IHEKISSDSLWRQANVILSGHEVPGEGEHKIMEHIRILRSQKDYNPNTRHCIYGLDADLI 210
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
+L L+ H+ HF++LRE + L + H + P+
Sbjct: 211 ILGLSVHDSHFALLREEV-----------------LFGKNH-------------NSKPLE 240
Query: 299 KKKYQFLNIWVLREYLQYEL-DIPNP-PFPINFERIVDDFVFLCFFVGNDFLPHMPTLEI 356
++ + L+I +LREYL+ E ++ N F +FER++DDF+ + F +GNDFLP++P L +
Sbjct: 241 QQNFFLLHISILREYLELEFAELENELMFEYDFERLLDDFILVLFVIGNDFLPNLPDLHL 300
Query: 357 REGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQK 407
+GA +L+ ++ M GY+ + G + R +++ ++ +E F++
Sbjct: 301 NKGAFPVLLQTFKEALRHMDGYMNECGTINFSRFSIWLEYLSKFEKANFER 351
Score = 136 bits (342), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 74/176 (42%), Positives = 100/176 (56%), Gaps = 3/176 (1%)
Query: 451 YKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFAS 510
+K+ YY +K S + D+ K+ YVEGL WV YYYQ SW W+Y YHYAP S
Sbjct: 510 WKDAYYKEKLGFSYYD--DEKLKEQTENYVEGLQWVLYYYYQGCPSWSWYYKYHYAPRIS 567
Query: 511 DLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQ 570
D+ + +I+F PF PF QLM LP S + +P YR LM D SPI FYP D +
Sbjct: 568 DIIKGINKKISFEKNRPFTPFQQLMSVLPKRSKNLIPPVYRPLMYDEKSPILDFYPNDVE 627
Query: 571 IDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYV-HPQ 625
+D NGK W+ VVK+ F+D + L++ + L +EE RN D+L+ +PQ
Sbjct: 628 LDKNGKTADWEAVVKISFVDAERLIKVMAPYDEKLNQEEKDRNRFGTDILFCFNPQ 683
>gi|402082044|gb|EJT77189.1| 5'-3' exoribonuclease 1 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 1452
Score = 289 bits (739), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 161/391 (41%), Positives = 222/391 (56%), Gaps = 64/391 (16%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP F+RWL++RYP +I ++ E+ EFD LYLDMNGII
Sbjct: 1 MGVPKFFRWLSERYP-AISQLIAEN-------------------RIPEFDCLYLDMNGII 40
Query: 61 HPCFHPDGKPAP--TSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C H D S +++F IF+YI+H+F ++P++L ++AIDGVAPRAKMNQQR R
Sbjct: 41 HNCTHKDTHDTSFRLSEEEMFIRIFNYIEHLFGKIKPKQLFFMAIDGVAPRAKMNQQRAR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RFR A DA +A R + GK L K E DSN ITPGT FMA LS L+YF
Sbjct: 101 RFRTALDAEQA-------RDKAISEGKELP---KEEPFDSNCITPGTAFMAKLSEQLKYF 150
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
+ ++++ WQ +++LS VPGEGEHKIM YIR + P ++ N RHCLYGLDADLI
Sbjct: 151 VNKKVSEDKEWQGCEIVLSGHEVPGEGEHKIMEYIRNAKAQPDYNDNVRHCLYGLDADLI 210
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
ML L +H+ HF +LRE +T G+Q + +
Sbjct: 211 MLGLLSHDPHFCLLREEVTF-GRQSQA---------------------------KSKELE 242
Query: 299 KKKYQFLNIWVLREYLQYELDIPNP----PFPINFERIVDDFVFLCFFVGNDFLPHMPTL 354
+ + L++ ++REYL+ E FP + ER++DDF+ + FFVGNDFLP++P L
Sbjct: 243 HQNFYLLHLCIVREYLELEFQELKKEGAMSFPFDMERVIDDFILMAFFVGNDFLPNLPHL 302
Query: 355 EIREGAINLLMHVYRREFTAMGGYLTDAGEV 385
I EGA+ L+ +Y++ GY+ + G V
Sbjct: 303 HINEGALALMFKLYKQILPKCDGYINEGGTV 333
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 78/174 (44%), Positives = 108/174 (62%), Gaps = 1/174 (0%)
Query: 451 YKERYYADKFE-ISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFA 509
+K++YY++KFE S PE ++ + + YV+GL WV YYY+ + SW WFY YHY+P
Sbjct: 507 WKDKYYSEKFEEWSTPELKEEGLRQLCENYVQGLQWVLYYYYRGIRSWPWFYKYHYSPMI 566
Query: 510 SDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDF 569
SD+ + ++ F LG+PFRPF+QLMG LP S +P Y LMT SPI FYP DF
Sbjct: 567 SDVMKGLNADMNFKLGQPFRPFEQLMGVLPDRSKKIVPTVYWPLMTQADSPIIDFYPRDF 626
Query: 570 QIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVH 623
+DMNGK+ W+ VVK+PFIDE+ LL L ++E RN + L + +
Sbjct: 627 VLDMNGKKQDWEAVVKIPFIDERRLLDAMATKNDLLADDEKARNGFGVALKFTY 680
>gi|156098318|ref|XP_001615191.1| hypothetical protein [Plasmodium vivax Sal-1]
gi|148804065|gb|EDL45464.1| hypothetical protein, conserved [Plasmodium vivax]
Length = 587
Score = 289 bits (739), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 194/653 (29%), Positives = 300/653 (45%), Gaps = 133/653 (20%)
Query: 7 YRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGIIHPCFHP 66
Y+WL YP +++ + Q D VD+ Y+DMNG+IH C H
Sbjct: 2 YKWLTSYYPTVREELITNEGQKD-------VDI------------FYVDMNGVIHHCTHA 42
Query: 67 DGKPAPTSYD-DVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRFRAAKD 125
+ + P + ++ +I Y+ ++F LV+PRKL+Y+ +DGV+P+AKMNQQR RRF +
Sbjct: 43 NKETLPVHDEHELLTNILKYLKNLFHLVKPRKLVYVGVDGVSPKAKMNQQRKRRFLSL-- 100
Query: 126 AAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQARLNQ 185
K+ + N IT GT FM ++ AL + Q L +
Sbjct: 101 ------------------FKVSDNSNSAHLFNPNCITTGTDFMYKINLALNKWFQI-LKK 141
Query: 186 IPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIMLSLATH 245
+ F VI S ++VPGEGEHKI+ +IR G N HC+YGLDADLIMLSL TH
Sbjct: 142 KGIFPF-DVIFSGSDVPGEGEHKILKFIREHCKRDGAFRNYSHCIYGLDADLIMLSLVTH 200
Query: 246 EIHFSILREVITLPGQQEKCFV---------CGQVGHLAAEC-HGKPGDNPADWNGVDD- 294
ILR+ + + GQ G A HG +NP ++
Sbjct: 201 LNSIFILRDKYKMANDSHAALLENLEKAQRGVGQPGGDAENTNHGGNEENPIQGGNAEEP 260
Query: 295 ------------------------------------TPIHKKKYQFLNIWVLREYLQYEL 318
P++ ++ L+++ LR ++ ++
Sbjct: 261 IQSDTAEDTIQPHTAEDAAPPFCRVHRYTQDHYANCEPLNSYDFEILDVYKLRNSIRTQI 320
Query: 319 DI------PNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHVYRREF 372
N R+VDD VFL F VGNDFLPH+P ++I EG++N +++ Y
Sbjct: 321 ATYINKLKKEKNVVFNISRVVDDIVFLSFLVGNDFLPHIPNVDINEGSMNEILNAYIFYI 380
Query: 373 TAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYEYNEAMKLNARRESSEE 432
G Y+T +V + R++ ++ ++ E F KR + E+ +
Sbjct: 381 YKYGNYITLKDKVHIQRLKIILKILSAQEFSYFLKRGNDENVREFTD------------- 427
Query: 433 LLQAPVAVADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQ 492
E YK YY KF + +P++I + +V KY+EGL W YY+
Sbjct: 428 ---------------ERTYKGYYYLQKFGVEDPQQI----QLIVNKYIEGLFWNLHYYHF 468
Query: 493 DVCSWQWFYPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRN 552
SW W YPYHYAP SDL + F G+P+ + L+ LP ++ LPE Y+N
Sbjct: 469 GCASWCWEYPYHYAPLCSDLLSFEKSDFFFEKGKPYSAYTHLISVLPQKDNNLLPEAYKN 528
Query: 553 LMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFID----EKLLLRQTKKL 601
+ ++ + F+P + +ID NGK+ W+ +V LPFI+ K++ ++KK+
Sbjct: 529 IYSE--DEVKSFFPENVRIDPNGKKETWEYIVHLPFINCNTINKIITERSKKI 579
>gi|290978067|ref|XP_002671758.1| predicted protein [Naegleria gruberi]
gi|284085329|gb|EFC39014.1| predicted protein [Naegleria gruberi]
Length = 1261
Score = 288 bits (738), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 177/414 (42%), Positives = 239/414 (57%), Gaps = 61/414 (14%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEED-PQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGI 59
MGVP ++WL++RYP + E P VD NLYLDMNGI
Sbjct: 1 MGVPRLFKWLSERYPCIASSLTEATIPTVD---------------------NLYLDMNGI 39
Query: 60 IHPCFHPDGK-PAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
IH C H D + A + ++ IF YID +F L++P K +LA+DGVAPRAKMNQQR+R
Sbjct: 40 IHNCTHKDDELKAQLTEKEMILKIFRYIDQLFQLIKPSKHFFLALDGVAPRAKMNQQRSR 99
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RFR D E++LRK+ E+ G+ E+ DSN ITPGT+FMA LS L+YF
Sbjct: 100 RFRKVFD-------EQQLRKKLEQKGE--KVPERDNLFDSNCITPGTEFMAKLSMHLKYF 150
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
I +++ WQ KVILS VPGEGEHKIM++IR ++ G+ PN RHCLYGLDADLI
Sbjct: 151 IHSKMQTDIKWQQCKVILSGHEVPGEGEHKIMNFIRGRKMEAGYQPNERHCLYGLDADLI 210
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
L L THE HF +LRE + F + + KP
Sbjct: 211 CLGLVTHEPHFMLLREDV---------FEQYRNNDSKEKSSNKP---------------F 246
Query: 299 KKKYQFLNIWVLREYLQYE----LDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTL 354
+K+ L++ LR+YL +E L F + ERI+DDFVF FF GNDFLPHMPTL
Sbjct: 247 AEKFHLLHLCALRQYLDFEFRQALLEQKLSFEYDLERIIDDFVFFIFFTGNDFLPHMPTL 306
Query: 355 EIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKR 408
+I+EG+IN ++ +Y ++ GYLT+ G+V L+RV+ F++++A E + ++R
Sbjct: 307 DIKEGSINTMIDIY-KQILPKSGYLTELGDVHLERVQDFVRALASQESSMMEQR 359
>gi|449689746|ref|XP_004212130.1| PREDICTED: 5'-3' exoribonuclease 1-like, partial [Hydra
magnipapillata]
Length = 512
Score = 288 bits (738), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 168/513 (32%), Positives = 253/513 (49%), Gaps = 95/513 (18%)
Query: 89 IFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRFRAAKDAAEAEAEEERLRKEFEEAGKLLS 148
+F +++P+K ++A+DG APRAKMNQQR+RRFR AK+ + E A +
Sbjct: 45 LFRIIKPKKNFFMAVDGCAPRAKMNQQRSRRFRTAKEVGIS----------IENAIQRGE 94
Query: 149 AKEKPETCDSNVITPGTQFMAVLSAALQYFIQARLNQIPGWQFTKVILSDANVPGEGEHK 208
K ++ DSN ITPGT+FM L L+YFI +++ P W+ V S NVPGEGEHK
Sbjct: 95 TLPKGDSFDSNCITPGTEFMDRLHQQLKYFINYKISTDPLWKHCVVHFSGHNVPGEGEHK 154
Query: 209 IMSYIRLQRNLPGFDPNTRHCLYGLDADLIMLSLATHEIHFSILREVITLPGQQEKCFVC 268
IM YIR ++ P +DPNTRHCLYGLDADLIML L+ HE HF +LRE + +
Sbjct: 155 IMDYIRYCKSKPDYDPNTRHCLYGLDADLIMLGLSVHEPHFCLLREEVRFGAKSNIVL-- 212
Query: 269 GQVGHLAAECHGKPGDNPADWNGVDDTPIHKKKYQFLNIWVLREYLQYELDIPNPP--FP 326
PGD + + L++ +LREYL E F
Sbjct: 213 ------------SPGD---------------QVFHLLHLSLLREYLDLEFSSMKESLEFE 245
Query: 327 INFERIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVL 386
+ E+I+DD++FL F VGNDF+PH+P + I A+ VY+ GY+ + G V
Sbjct: 246 YDLEKIIDDWIFLGFLVGNDFVPHLPHMHINHDALPYFYSVYKDFLITADGYINEGGVVN 305
Query: 387 LDRVEKFIQSVAVYEDQIFQKRTRIQQ--------------------------------- 413
L R+++F V+ ++ ++F + +
Sbjct: 306 LTRLKQFFGCVSDFDYELFAEWKKTSSDGCAAQYKNHKNFYNTCFHKDDFDIDFLLQIFS 365
Query: 414 ---------------AYEYNEAMKLNARRESSEELLQAPVAVADTVKLGEPGYKERYYAD 458
+ +N +++ +++ + +A+ D + Y YA+
Sbjct: 366 LENPDGTEGFANAFANFSFNGSLQKKSKKLIKVKGSDKDLAIVDEFTEHKQNY----YAE 421
Query: 459 KFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDL 518
KF ++ I+ + + YV L W+ YY+ + SW W+YPYHY+P+ SDL
Sbjct: 422 KFGMNVKNNIE--MQTICSNYVTALQWISHYYFNGLQSWSWYYPYHYSPYMSDLASFELE 479
Query: 519 EITFFLGEPFRPFDQLMGTLPAASSSALPEKYR 551
+I+ LG PFRPF+QL+ LPAAS LP+ ++
Sbjct: 480 KISMDLGTPFRPFEQLLAVLPAASGKLLPKAFQ 512
>gi|407040062|gb|EKE39962.1| 5'-3' exonuclease domain containing protein [Entamoeba nuttalli
P19]
Length = 666
Score = 288 bits (738), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 204/647 (31%), Positives = 321/647 (49%), Gaps = 75/647 (11%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQ-VDGEGVARPVDVSKPNPNGMEFDNLYLDMNGI 59
MGVP+ + W+ P V+ PQ + GE + + N G E+DNLY+D NGI
Sbjct: 1 MGVPSLFAWVRQICP----GYVKRLPQKIQGE------EKREKNETGEEYDNLYIDFNGI 50
Query: 60 IHPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRR 119
IH C H + + S +++ + IF +D VRPRK++++ +DGV P AK+ QQR RR
Sbjct: 51 IHQCSHSEKEEEAASEEEIMERIFKAMDRYVNYVRPRKMIFIGVDGVCPVAKIIQQRKRR 110
Query: 120 FRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFI 179
+ + + DSN ITPGT+FM + AL +I
Sbjct: 111 YCSILNNTGG--------------------------FDSNCITPGTKFMEKIGIALHGYI 144
Query: 180 QARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIM 239
R++ W KVILSD+ V GEGEHKI +IR + RHC+YG+D DLI+
Sbjct: 145 VNRMDNDLYWSGLKVILSDSKVAGEGEHKIYEFIRKEIEKNKKFKEERHCIYGMDGDLII 204
Query: 240 LSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADW-NGVDDTPIH 298
L+L + + +ILRE + + KC +CG+ H + HGK + N + I+
Sbjct: 205 LTLGINITNMTILREEQEIIKKNNKCDICGK-KHKTKD-HGKETKLIMCYPNELRKWLIN 262
Query: 299 KKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIRE 358
+ K ++ + + I E I+ DF+ + F VGNDFLP +P+++I+
Sbjct: 263 EAKKN-----LIETKKEEGEEYKEEDIQIIEEEIIKDFILISFLVGNDFLPRIPSIKIQT 317
Query: 359 GAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIF----QKRTRIQQA 414
G + +L+ Y + + G L+ E+ + ++ + + E I Q + ++
Sbjct: 318 GGMEMLLKNYWKLYVK-GKRLSKGTEINIKNFKELFKMIGEEESNILKGIIQNTKKDKEV 376
Query: 415 YEYNEAMKLNARRESSEELLQAPVAVADTVKLGEPGYKERYYADKFEISNPEEIDKVKKD 474
EY++ + ++ +E +KL + GY +RYY F +N E I ++
Sbjct: 377 KEYDQNIYFDSSKE---------------IKLNQEGYHDRYYQIHFNTTNIEFI----QN 417
Query: 475 VVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASD--LKDLSDLEITFFLGEPFRPFD 532
+V Y EG+ WV YY + SW+W+Y +HYAPFA D L + I+F P P +
Sbjct: 418 IVHHYFEGISWVFNYYLNTLPSWRWYYKFHYAPFALDFALYLNENDSISFSSDTPILPLE 477
Query: 533 QLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEK 592
QL+ LP S LP K + + P+SPI ++ F+ID+NG+ ++GV LP ID
Sbjct: 478 QLLAVLPPHSFINLPSKLAHFVLSPTSPILHYFNTSFKIDINGENKLYKGVPLLPDIDIN 537
Query: 593 LLLRQTKKLEVFLTEEELFRNSVM-LDLLYV--HPQHPLYQQI-TLY 635
LL LE L +L RN ++ ++LYV + PL+ +I +LY
Sbjct: 538 LLHSFVFNLEHSLPPSDLKRNLLLPFNILYVTKNSSLPLFSKIQSLY 584
>gi|403216681|emb|CCK71177.1| hypothetical protein KNAG_0G01190 [Kazachstania naganishii CBS
8797]
Length = 1493
Score = 288 bits (737), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 160/413 (38%), Positives = 240/413 (58%), Gaps = 63/413 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MG+P F+R++++R+P+ I ++E G P EFDNLYLDMN I+
Sbjct: 1 MGIPKFFRYISERWPM-ISQLIE--------GSQIP-----------EFDNLYLDMNSIL 40
Query: 61 HPCFH--PDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C H D + ++VF IF YIDH+FL ++P+K+ Y+AIDGVAPRAKMNQQR+R
Sbjct: 41 HTCTHGNDDDVTKRMTEEEVFAKIFSYIDHLFLTIKPQKVFYMAIDGVAPRAKMNQQRSR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RFR A DA E L+K + ++ S E DSN ITPGT+FMA L+ L+YF
Sbjct: 101 RFRTAMDA------ENMLKKALQRGEEIPSG----EPFDSNSITPGTEFMAKLTKNLKYF 150
Query: 179 IQARLNQIPGWQF-TKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADL 237
I +++ W ++I S VPG G HKIMS+IR R+ GFD NTRHC+YGLDADL
Sbjct: 151 IHDKISNDSNWSGDVEIIFSGHEVPGRGRHKIMSFIRNLRSQDGFDNNTRHCIYGLDADL 210
Query: 238 IMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPI 297
IMLSL+ H HF++LRE + G++ G P +
Sbjct: 211 IMLSLSAHAPHFALLREEVVFGGRR--------------------GQRP--------KAL 242
Query: 298 HKKKYQFLNIWVLREYLQYEL-DIPNP-PFPINFERIVDDFVFLCFFVGNDFLPHMPTLE 355
++ + L+I +LREY+ E +I + F +FER++DDF+ + F +GNDFLP++P L
Sbjct: 243 EEQNFFLLHISLLREYMGLEFQEIADELKFTYDFERVLDDFILVMFVIGNDFLPNLPDLH 302
Query: 356 IREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKR 408
+ +GA +L+ ++ + GY+ + G++ L R++ ++ ++ +E F+++
Sbjct: 303 LNKGAFPVLLQTFKEALLHLDGYINENGQINLHRLKVWLDYLSQFELMNFERK 355
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 80/176 (45%), Positives = 104/176 (59%), Gaps = 3/176 (1%)
Query: 451 YKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFAS 510
+K +YY +K + ++ DK+ D+ YVEGL WV YYY+ SW W+Y +HYAP S
Sbjct: 515 WKNQYYKEKLGYGSQDD-DKIV-DLTKNYVEGLQWVLYYYYRGCPSWGWYYQHHYAPRIS 572
Query: 511 DLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQ 570
DL D I F LG PF PF+QLM LP S + +P R LM DP+SPI FYP +
Sbjct: 573 DLARGLDQIIKFDLGRPFTPFEQLMAVLPERSKNLIPAALRPLMYDPNSPIIDFYPASVK 632
Query: 571 IDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYV-HPQ 625
+DMNGK W+ VV L F+DE+ L+ K LT EE RNS +DL + +PQ
Sbjct: 633 LDMNGKTADWEAVVLLSFVDEQRLVEAMKPYLAKLTPEERERNSFGVDLRFAFNPQ 688
>gi|254582643|ref|XP_002499053.1| ZYRO0E02486p [Zygosaccharomyces rouxii]
gi|238942627|emb|CAR30798.1| ZYRO0E02486p [Zygosaccharomyces rouxii]
Length = 1526
Score = 288 bits (737), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 162/411 (39%), Positives = 232/411 (56%), Gaps = 63/411 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MG+P F++++A+R+P+ I+ ++E G+ + EFDNLYLDMN I+
Sbjct: 1 MGIPKFFKYIAERWPM-ILQLIE------GQHIP-------------EFDNLYLDMNSIL 40
Query: 61 HPCFH--PDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C H D + ++VF IF YIDH+F ++P+K+ Y+AIDGVAPRAKMNQQR R
Sbjct: 41 HTCTHGNDDDVTKRLTEEEVFGKIFVYIDHLFHTIKPKKVFYMAIDGVAPRAKMNQQRAR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RFR A DA +A L+K E ++ K E DSN ITPGT+FMA L+ LQYF
Sbjct: 101 RFRTAMDAEKA------LKKAIENGEEI----PKGEPFDSNSITPGTEFMAKLTKNLQYF 150
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
I ++ W+ K+I S VPGEGEHKIM +IR R ++PNTRHC+YGLDADLI
Sbjct: 151 IHDKITNDSSWRDVKIIFSGHEVPGEGEHKIMDFIRNIRGQGDYNPNTRHCIYGLDADLI 210
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
ML L+ H HF++LRE + GK G T +
Sbjct: 211 MLGLSVHAPHFALLREEVVF---------------------GK--------RGKKSTALE 241
Query: 299 KKKYQFLNIWVLREYLQYELD--IPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEI 356
+ + L+I +LREY++ E + F +FERI+DDF+ + F +GNDFLP++P L +
Sbjct: 242 HQNFYLLHISLLREYMELEFEEIADELQFEYDFERILDDFILIMFVIGNDFLPNLPDLHL 301
Query: 357 REGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQK 407
+ A LLM ++ GY+ G++ L + ++ ++ +E IF+K
Sbjct: 302 NKEAFPLLMKTFKEALLHADGYINYNGQINLKTLRLWLHYLSQFELMIFEK 352
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 78/178 (43%), Positives = 100/178 (56%), Gaps = 7/178 (3%)
Query: 451 YKERYYADK--FEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPF 508
+K+RYY +K F I + E++ D+ YVEGL WV YYY+ SW W+Y YHYAP
Sbjct: 510 WKDRYYKEKLGFSIHDTEKL----TDITENYVEGLQWVLYYYYRGCASWGWYYHYHYAPR 565
Query: 509 ASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPD 568
SDL+ D + F G PF PF QLM LP S + +P +R LM D SPI FYP +
Sbjct: 566 ISDLQLGLDQILEFEKGIPFTPFQQLMAVLPERSKNLIPAPFRPLMYDEKSPIIDFYPAE 625
Query: 569 FQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLY-VHPQ 625
D NGK W+ VV + F+DEK L L LT +E RN+ DL+Y +PQ
Sbjct: 626 VDTDKNGKTADWEAVVLISFVDEKRLQDAMAPLMSKLTPDEKARNTAGTDLIYSFNPQ 683
>gi|188501630|gb|ACD54753.1| 5-3 exoribonuclease 2 isoform 9-like protein [Adineta vaga]
Length = 510
Score = 288 bits (737), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 186/594 (31%), Positives = 292/594 (49%), Gaps = 103/594 (17%)
Query: 56 MNGIIHPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQ 115
MN II+ C + D S D++ + +F+YID IF ++ PR L+Y++IDGVAP+AKM+Q+
Sbjct: 1 MNEIIYLCANLDDLSTLKSEDEIIQGVFEYIDEIFSIIHPRNLIYMSIDGVAPKAKMHQE 60
Query: 116 RTRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAAL 175
R + AK K S E+ CD I PGT FM+ LS L
Sbjct: 61 RVSLYNYAK--------------------KHSSDNEQFTKCD---IKPGTMFMSKLSDKL 97
Query: 176 QYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDA 235
+ +I R+N IP W+ VILSDANVPGEGEHK M +IR Q+ + NT H L+ D+
Sbjct: 98 RSYIHDRMNSIPAWKSIIVILSDANVPGEGEHKTMDFIRSQK---FSNSNTNHVLFSGDS 154
Query: 236 DLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDT 295
D+++L L T+P D+
Sbjct: 155 DMVLLGL--------------TMPS--------------------------------DNV 168
Query: 296 PIHKKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLE 355
I ++K + ++ R+ +I N F + + I+DD++FLC GNDFLP++P++E
Sbjct: 169 RIMRRKTNKIEVYTFRDLKLLREEIKNE-FIGDLKSIIDDWIFLCLLAGNDFLPNLPSIE 227
Query: 356 IREGAIN-LLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVA-VYEDQIFQKRTRIQQ 413
+ IN ++ Y+ YL + E L+ + ++ + + ED++ R Q
Sbjct: 228 FNQTEINNVIFDTYKEYIRKKDVYLIENMEPNLEYFKILLKHIGEIEEDKVMSLLERSQT 287
Query: 414 AYEYNEAMKLNARRESSEELLQAPVAVADTVKLGEPGYKE----------------RYYA 457
A Y+ L+ R+ Q P+ ++ P +++ +YY
Sbjct: 288 ATNYS----LDEIRK------QEPITNPSAIRFAPPSFQKSRNPTSSTESATHWQRQYYK 337
Query: 458 DKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSD 517
DKF +++ +VV Y EGLCWV YYY+ V SW W+Y Y+Y P AS +L +
Sbjct: 338 DKFGFKG-DQLKTKSTEVVQHYAEGLCWVLHYYYKGVPSWDWYYSYYYPPLASTFSNLEN 396
Query: 518 LEITFFL-GEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGK 576
+ + F +P +P + ++ P+ + LP+ ++ L++D S I FY D ID +GK
Sbjct: 397 IPMNFNRNSKPLKPLEHMLAIFPSKYARYLPKNWQELISDMKSSIIDFYRSDPAIDAHGK 456
Query: 577 RFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVHPQHPLYQ 630
R+ Q +VKLPF+DEK L K ++ L++EE RN + D L++H + YQ
Sbjct: 457 RYEEQYIVKLPFVDEKCLFEALKSIDSTLSKEEEKRNRLDDDHLFIHSTNSCYQ 510
>gi|145515211|ref|XP_001443505.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124410894|emb|CAK76108.1| unnamed protein product [Paramecium tetraurelia]
Length = 1303
Score = 288 bits (737), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 200/622 (32%), Positives = 309/622 (49%), Gaps = 101/622 (16%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP FY WL R+PL + + + D YLDMN II
Sbjct: 1 MGVPNFYSWLMRRFPLCLYE----------------------HTRAQRVDYFYLDMNQII 38
Query: 61 HPCFHP-----DGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQ 115
+ C + +DD++ SI +Y+D I LV P++LL+LA DGVAPRAKMN
Sbjct: 39 YKCATDPTVLFKDQLRERDFDDIWVSILNYLDMIINLVNPQQLLFLAFDGVAPRAKMN-- 96
Query: 116 RTRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAAL 175
+ + +++ + L ++ G +K ET +N +PGT+FM L+ +
Sbjct: 97 -----QQRQRRFQSQKRYKYLSAHLQQIGLF----QKNETYKNNQFSPGTEFMTQLNQQI 147
Query: 176 QYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDA 235
+++I+ + ++ P ++ K+I S +VPGEGEHK++S+IR NL DPN+ H +YG DA
Sbjct: 148 KFYIERKYSEDPKFKNLKIIFSGCDVPGEGEHKLLSFIR---NLQC-DPNSVHMIYGADA 203
Query: 236 DLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDT 295
DLIML L T + I+RE + Q AA N V
Sbjct: 204 DLIMLGLLTQLKNVLIIREDLKFK----------QTASAAA-------------NRVVKI 240
Query: 296 PIHKKKYQFLNIWVLREYLQYEL----DIPNPPFPINFERIVDDFVFLCFFVGNDFLPHM 351
P ++ +NI ++REYL E D P+ IN RI+DDF+ LCFFVGNDFLP +
Sbjct: 241 P----EFLVINISIVREYLDLEFAVLKDKMKVPYDIN--RIIDDFILLCFFVGNDFLPRI 294
Query: 352 PTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRI 411
+IR G I L+ +++ T YL G++ + + + +E R
Sbjct: 295 FCFDIRIGTIEPLVDLFKNHLTNANDYLVHRGDINYKELISLLDLLQGFEKLCINDRQ-- 352
Query: 412 QQAYEYNEAMKLNARRESSEELLQAPVAVADTVK---LGEPGYKER-YYADKFEISNPEE 467
Q+ Y LN + ++ + + + + + +K L E + YY K +I+ +E
Sbjct: 353 QEMLNY-----LNTKHQNRQVIAKEKELIDNILKYFSLQEQTEGRKFYYKAKCQITKDDE 407
Query: 468 IDKVK-KDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDL--------KDLSDL 518
+D K D+ + Y+EG+ +V +YY++ V SW+W+Y Y+YAP DL K L D
Sbjct: 408 LDLDKLGDMCVNYMEGIYFVLQYYFKGVPSWEWYYKYYYAPLCGDLVGVVSNMVKQLQDK 467
Query: 519 E--ITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYK----FYPPDFQID 572
E I GEP+ PF QL+ L ++ LPE Y L+TD + I + +YP +F+ D
Sbjct: 468 EEPILLTKGEPYPPFKQLLSILTPENAQLLPEPYGRLLTDKENSILRTPIDYYPENFETD 527
Query: 573 MNGKRFAWQGVVKLPFIDEKLL 594
G + Q + K+PF+D K++
Sbjct: 528 SYGTMYEHQHITKIPFLDCKIV 549
>gi|366992011|ref|XP_003675771.1| hypothetical protein NCAS_0C04170 [Naumovozyma castellii CBS 4309]
gi|342301636|emb|CCC69407.1| hypothetical protein NCAS_0C04170 [Naumovozyma castellii CBS 4309]
Length = 1488
Score = 288 bits (736), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 157/411 (38%), Positives = 233/411 (56%), Gaps = 62/411 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MG+P F+R++++R+P+ I+ ++E G P EFDNLYLDMN I+
Sbjct: 1 MGIPKFFRYISERWPM-ILQLIE--------GTQIP-----------EFDNLYLDMNSIL 40
Query: 61 HPCFH--PDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C H D + ++VF IF YIDH+FL ++P+K Y+AIDGVAPRAKMNQQR+R
Sbjct: 41 HTCTHGNDDDVTKRMTEEEVFAKIFTYIDHLFLTIKPKKTFYMAIDGVAPRAKMNQQRSR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RFR A DA A L+K + ++ K E DSN ITPGT+FMA L+ L+YF
Sbjct: 101 RFRTAMDAEHA------LQKAIDHGEEI----PKGEPFDSNSITPGTEFMAKLTKNLKYF 150
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
I +++ W+ +I S VPGEGEHKIM +IR FD NTRHC+YGLDADLI
Sbjct: 151 IHDKISNDAKWREIDIIFSGHEVPGEGEHKIMDFIRRITAEKDFDENTRHCIYGLDADLI 210
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
+L L+TH HF++LRE + G+ N +
Sbjct: 211 ILGLSTHAPHFALLREEVVF---------------------GRRNSNKV-------KTLE 242
Query: 299 KKKYQFLNIWVLREYLQYELD--IPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEI 356
+ + L++ +LREY++ E FP +FER++DDF+ + F +GNDFLP++P L +
Sbjct: 243 NQNFYLLHLSLLREYMELEFSEIADEMQFPFDFERVLDDFILVMFVIGNDFLPNLPDLHL 302
Query: 357 REGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQK 407
+GA +++ ++ + GY+ + G++ L+R+ + Q ++ +E F+K
Sbjct: 303 NKGAFPVILQTFKEALLHLDGYINEHGKINLERLRVWFQYLSQFELLNFEK 353
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 77/176 (43%), Positives = 94/176 (53%), Gaps = 2/176 (1%)
Query: 450 GYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFA 509
+K YY DK +E V + YVEGL WV YYY+ SW W+Y YHYAP
Sbjct: 510 NWKHDYYKDKLGFKTNQEESVV--SLTNNYVEGLQWVLYYYYRGCPSWGWYYHYHYAPRI 567
Query: 510 SDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDF 569
SDL+ D I F G PF PF+QLM LP S + +P R LM D SPI FYP +
Sbjct: 568 SDLEKGLDQIIKFDKGRPFTPFEQLMAVLPERSKNLIPPALRPLMYDEKSPIIDFYPSEV 627
Query: 570 QIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVHPQ 625
++DMNGK W+ VV L F+DEK L+ K T EE RNS L ++ Q
Sbjct: 628 KLDMNGKTADWEAVVLLSFVDEKRLVEAMKPYLSKFTPEEKLRNSFGTSLKFIFNQ 683
>gi|365765775|gb|EHN07281.1| Kem1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 1528
Score = 286 bits (733), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 160/411 (38%), Positives = 237/411 (57%), Gaps = 63/411 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MG+P F+R++++R+P+ I+ ++E G P EFDNLYLDMN I+
Sbjct: 1 MGIPKFFRYISERWPM-ILQLIE--------GTQIP-----------EFDNLYLDMNSIL 40
Query: 61 HPCFH--PDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C H D + ++VF I YIDH+F ++P+K+ Y+AIDGVAPRAKMNQQR R
Sbjct: 41 HNCTHGNDDDVTKRLTEEEVFAKICTYIDHLFQTIKPKKIFYMAIDGVAPRAKMNQQRAR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RFR A DA +A L+K E ++ K E DSN ITPGT+FMA L+ LQYF
Sbjct: 101 RFRTAMDAEKA------LKKAIENGDEI----PKGEPFDSNSITPGTEFMAKLTKNLQYF 150
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
I +++ W+ ++I S VPGEGEHKIM++IR ++ F+ NTRHC+YGLDADLI
Sbjct: 151 IHDKISNDSKWREVQIIFSGHEVPGEGEHKIMNFIRHLKSQKDFNQNTRHCIYGLDADLI 210
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
ML L+TH HF++LRE +T G +E +
Sbjct: 211 MLGLSTHGPHFALLREEVTF-------------GRRNSEKKS----------------LE 241
Query: 299 KKKYQFLNIWVLREYLQYEL-DIPNP-PFPINFERIVDDFVFLCFFVGNDFLPHMPTLEI 356
+ + L++ +LREY++ E +I + F NFERI+DDF+ + F +GNDFLP++P L +
Sbjct: 242 HQNFYLLHLSLLREYMELEFKEIADEMQFEYNFERILDDFILVMFVIGNDFLPNLPDLHL 301
Query: 357 REGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQK 407
+GA +L+ ++ GY+ + G++ L R+ ++ ++ +E F+K
Sbjct: 302 NKGAFPVLLQTFKEALLHTDGYINEHGKINLKRLGVWLNYLSQFELLNFEK 352
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 77/171 (45%), Positives = 101/171 (59%), Gaps = 2/171 (1%)
Query: 451 YKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFAS 510
+K YY DK + + E +KV+ D+ YVEGL WV YYY+ SW W+YP+HYAP S
Sbjct: 511 WKHEYYHDKLKFTTDSE-EKVR-DLAKDYVEGLQWVLYYYYRGCPSWSWYYPHHYAPRIS 568
Query: 511 DLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQ 570
DL D +I F L +PF PF QLM LP S + +P +R LM D SPI+ FYP + Q
Sbjct: 569 DLVKGLDQDIEFDLSKPFTPFQQLMAVLPERSKNLIPPAFRPLMYDEQSPIHDFYPAEVQ 628
Query: 571 IDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLY 621
+D NGK W+ VV + F+DEK L+ + L+ EE RN DL+Y
Sbjct: 629 LDKNGKTADWEAVVLISFVDEKRLIEAMQPYLCKLSPEEKTRNQFGKDLIY 679
>gi|349578059|dbj|GAA23225.1| K7_Kem1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 1528
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 160/411 (38%), Positives = 237/411 (57%), Gaps = 63/411 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MG+P F+R++++R+P+ I+ ++E G P EFDNLYLDMN I+
Sbjct: 1 MGIPKFFRYISERWPM-ILQLIE--------GTQIP-----------EFDNLYLDMNSIL 40
Query: 61 HPCFH--PDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C H D + ++VF I YIDH+F ++P+K+ Y+AIDGVAPRAKMNQQR R
Sbjct: 41 HNCTHGNDDDVTKRLTEEEVFAKICTYIDHLFQTIKPKKIFYMAIDGVAPRAKMNQQRAR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RFR A DA +A L+K E ++ K E DSN ITPGT+FMA L+ LQYF
Sbjct: 101 RFRTAMDAEKA------LKKAIENGDEI----PKGEPFDSNSITPGTEFMAKLTKNLQYF 150
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
I +++ W+ ++I S VPGEGEHKIM++IR ++ F+ NTRHC+YGLDADLI
Sbjct: 151 IHDKISNDSKWREVQIIFSGHEVPGEGEHKIMNFIRHLKSQKDFNQNTRHCIYGLDADLI 210
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
ML L+TH HF++LRE +T G +E +
Sbjct: 211 MLGLSTHGPHFALLREEVTF-------------GRRNSEKKS----------------LE 241
Query: 299 KKKYQFLNIWVLREYLQYEL-DIPNP-PFPINFERIVDDFVFLCFFVGNDFLPHMPTLEI 356
+ + L++ +LREY++ E +I + F NFERI+DDF+ + F +GNDFLP++P L +
Sbjct: 242 HQNFYLLHLSLLREYMELEFKEIADEMQFEYNFERILDDFILVMFVIGNDFLPNLPDLHL 301
Query: 357 REGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQK 407
+GA +L+ ++ GY+ + G++ L R+ ++ ++ +E F+K
Sbjct: 302 NKGAFPVLLQTFKEALLHTDGYINEHGKINLKRLGVWLNYLSQFELLNFEK 352
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 77/171 (45%), Positives = 101/171 (59%), Gaps = 2/171 (1%)
Query: 451 YKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFAS 510
+K YY DK + + E +KV+ D+ YVEGL WV YYY+ SW W+YP+HYAP S
Sbjct: 511 WKHEYYHDKLKFTTDSE-EKVR-DLAKDYVEGLQWVLYYYYRGCPSWSWYYPHHYAPRIS 568
Query: 511 DLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQ 570
DL D +I F L +PF PF QLM LP S + +P +R LM D SPI+ FYP + Q
Sbjct: 569 DLAKGLDQDIEFDLSKPFTPFQQLMAVLPERSKNLIPPAFRPLMYDEQSPIHDFYPAEVQ 628
Query: 571 IDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLY 621
+D NGK W+ VV + F+DEK L+ + L+ EE RN DL+Y
Sbjct: 629 LDKNGKTADWEAVVLISFVDEKRLIEAMQPYLCKLSPEEKTRNQFGKDLIY 679
>gi|256272237|gb|EEU07228.1| Kem1p [Saccharomyces cerevisiae JAY291]
Length = 1528
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 160/411 (38%), Positives = 237/411 (57%), Gaps = 63/411 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MG+P F+R++++R+P+ I+ ++E G P EFDNLYLDMN I+
Sbjct: 1 MGIPKFFRYISERWPM-ILQLIE--------GTQIP-----------EFDNLYLDMNSIL 40
Query: 61 HPCFH--PDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C H D + ++VF I YIDH+F ++P+K+ Y+AIDGVAPRAKMNQQR R
Sbjct: 41 HNCTHGNDDDVTKRLTEEEVFAKICTYIDHLFQTIKPKKIFYMAIDGVAPRAKMNQQRAR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RFR A DA +A L+K E ++ K E DSN ITPGT+FMA L+ LQYF
Sbjct: 101 RFRTAMDAEKA------LKKAIENGDEI----PKGEPFDSNSITPGTEFMAKLTKNLQYF 150
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
I +++ W+ ++I S VPGEGEHKIM++IR ++ F+ NTRHC+YGLDADLI
Sbjct: 151 IHDKISNDSKWREVQIIFSGHEVPGEGEHKIMNFIRHLKSQKDFNQNTRHCIYGLDADLI 210
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
ML L+TH HF++LRE +T G +E +
Sbjct: 211 MLGLSTHGPHFALLREEVTF-------------GRRNSEKKS----------------LE 241
Query: 299 KKKYQFLNIWVLREYLQYEL-DIPNP-PFPINFERIVDDFVFLCFFVGNDFLPHMPTLEI 356
+ + L++ +LREY++ E +I + F NFERI+DDF+ + F +GNDFLP++P L +
Sbjct: 242 HQNFYLLHLSLLREYMELEFKEIADEMQFEYNFERILDDFILVMFVIGNDFLPNLPDLHL 301
Query: 357 REGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQK 407
+GA +L+ ++ GY+ + G++ L R+ ++ ++ +E F+K
Sbjct: 302 NKGAFPVLLQTFKEALLHTDGYINEHGKINLKRLGVWLNYLSQFELLNFEK 352
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 77/171 (45%), Positives = 101/171 (59%), Gaps = 2/171 (1%)
Query: 451 YKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFAS 510
+K YY DK + + E +KV+ D+ YVEGL WV YYY+ SW W+YP+HYAP S
Sbjct: 511 WKHEYYHDKLKFTTDSE-EKVR-DLAKDYVEGLQWVLYYYYRGCPSWSWYYPHHYAPRIS 568
Query: 511 DLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQ 570
DL D +I F L +PF PF QLM LP S + +P +R LM D SPI+ FYP + Q
Sbjct: 569 DLVKGLDQDIEFDLSKPFTPFQQLMAVLPERSKNLIPPTFRPLMYDEQSPIHDFYPAEVQ 628
Query: 571 IDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLY 621
+D NGK W+ VV + F+DEK L+ + L+ EE RN DL+Y
Sbjct: 629 LDKNGKTADWEAVVLISFVDEKRLIEAMQPYLCKLSPEEKTRNQFGKDLIY 679
>gi|190407116|gb|EDV10383.1| 5'-3' exonuclease [Saccharomyces cerevisiae RM11-1a]
gi|259146337|emb|CAY79594.1| Kem1p [Saccharomyces cerevisiae EC1118]
Length = 1528
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 160/411 (38%), Positives = 237/411 (57%), Gaps = 63/411 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MG+P F+R++++R+P+ I+ ++E G P EFDNLYLDMN I+
Sbjct: 1 MGIPKFFRYISERWPM-ILQLIE--------GTQIP-----------EFDNLYLDMNSIL 40
Query: 61 HPCFH--PDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C H D + ++VF I YIDH+F ++P+K+ Y+AIDGVAPRAKMNQQR R
Sbjct: 41 HNCTHGNDDDVTKRLTEEEVFAKICTYIDHLFQTIKPKKIFYMAIDGVAPRAKMNQQRAR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RFR A DA +A L+K E ++ K E DSN ITPGT+FMA L+ LQYF
Sbjct: 101 RFRTAMDAEKA------LKKAIENGDEI----PKGEPFDSNSITPGTEFMAKLTKNLQYF 150
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
I +++ W+ ++I S VPGEGEHKIM++IR ++ F+ NTRHC+YGLDADLI
Sbjct: 151 IHDKISNDSKWREVQIIFSGHEVPGEGEHKIMNFIRHLKSQKDFNQNTRHCIYGLDADLI 210
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
ML L+TH HF++LRE +T G +E +
Sbjct: 211 MLGLSTHGPHFALLREEVTF-------------GRRNSEKKS----------------LE 241
Query: 299 KKKYQFLNIWVLREYLQYEL-DIPNP-PFPINFERIVDDFVFLCFFVGNDFLPHMPTLEI 356
+ + L++ +LREY++ E +I + F NFERI+DDF+ + F +GNDFLP++P L +
Sbjct: 242 HQNFYLLHLSLLREYMELEFKEIADEMQFEYNFERILDDFILVMFVIGNDFLPNLPDLHL 301
Query: 357 REGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQK 407
+GA +L+ ++ GY+ + G++ L R+ ++ ++ +E F+K
Sbjct: 302 NKGAFPVLLQTFKEALLHTDGYINEHGKINLKRLGVWLNYLSQFELLNFEK 352
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 77/171 (45%), Positives = 101/171 (59%), Gaps = 2/171 (1%)
Query: 451 YKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFAS 510
+K YY DK + + E +KV+ D+ YVEGL WV YYY+ SW W+YP+HYAP S
Sbjct: 511 WKHEYYHDKLKFTTDSE-EKVR-DLAKDYVEGLQWVLYYYYRGCPSWSWYYPHHYAPRIS 568
Query: 511 DLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQ 570
DL D +I F L +PF PF QLM LP S + +P +R LM D SPI+ FYP + Q
Sbjct: 569 DLVKGLDQDIEFDLSKPFTPFQQLMAVLPERSKNLIPPAFRPLMYDEQSPIHDFYPAEVQ 628
Query: 571 IDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLY 621
+D NGK W+ VV + F+DEK L+ + L+ EE RN DL+Y
Sbjct: 629 LDKNGKTADWEAVVLISFVDEKRLIEAMQPYLCKLSPEEKTRNQFGKDLIY 679
>gi|151943641|gb|EDN61951.1| 5'-3'-exonuclease [Saccharomyces cerevisiae YJM789]
Length = 1528
Score = 286 bits (732), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 160/411 (38%), Positives = 237/411 (57%), Gaps = 63/411 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MG+P F+R++++R+P+ I+ ++E G P EFDNLYLDMN I+
Sbjct: 1 MGIPKFFRYISERWPM-ILQLIE--------GTQIP-----------EFDNLYLDMNSIL 40
Query: 61 HPCFH--PDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C H D + ++VF I YIDH+F ++P+K+ Y+AIDGVAPRAKMNQQR R
Sbjct: 41 HNCTHGNDDDVTKRLTEEEVFAKICTYIDHLFQTIKPKKIFYMAIDGVAPRAKMNQQRAR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RFR A DA +A L+K E ++ K E DSN ITPGT+FMA L+ LQYF
Sbjct: 101 RFRTAMDAEKA------LKKAIENGDEI----PKGEPFDSNSITPGTEFMAKLTKNLQYF 150
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
I +++ W+ ++I S VPGEGEHKIM++IR ++ F+ NTRHC+YGLDADLI
Sbjct: 151 IHDKISNDSKWREVQIIFSGHEVPGEGEHKIMNFIRHLKSQKDFNQNTRHCIYGLDADLI 210
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
ML L+TH HF++LRE +T G +E +
Sbjct: 211 MLGLSTHGPHFALLREEVTF-------------GRRNSEKKS----------------LE 241
Query: 299 KKKYQFLNIWVLREYLQYEL-DIPNP-PFPINFERIVDDFVFLCFFVGNDFLPHMPTLEI 356
+ + L++ +LREY++ E +I + F NFERI+DDF+ + F +GNDFLP++P L +
Sbjct: 242 HQNFYLLHLSLLREYMELEFKEIADEMQFEYNFERILDDFILVMFVIGNDFLPNLPDLHL 301
Query: 357 REGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQK 407
+GA +L+ ++ GY+ + G++ L R+ ++ ++ +E F+K
Sbjct: 302 NKGAFPVLLQTFKEALLHTDGYINEHGKINLKRLGVWLNYLSQFELLNFEK 352
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 77/171 (45%), Positives = 101/171 (59%), Gaps = 2/171 (1%)
Query: 451 YKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFAS 510
+K YY DK + + E +KV+ D+ YVEGL WV YYY+ SW W+YP+HYAP S
Sbjct: 511 WKHEYYHDKLKFTTDSE-EKVR-DLAKDYVEGLQWVLYYYYRGCPSWSWYYPHHYAPRIS 568
Query: 511 DLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQ 570
DL D +I F L +PF PF QLM LP S + +P +R LM D SPI+ FYP + Q
Sbjct: 569 DLVKGLDQDIEFDLSKPFTPFQQLMAVLPERSKNLIPPTFRPLMYDEQSPIHDFYPAEVQ 628
Query: 571 IDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLY 621
+D NGK W+ VV + F+DEK L+ + L+ EE RN DL+Y
Sbjct: 629 LDKNGKTADWEAVVLISFVDEKRLIEAMQPYLCKLSPEEKTRNQFGKDLIY 679
>gi|6321265|ref|NP_011342.1| Xrn1p [Saccharomyces cerevisiae S288c]
gi|125342|sp|P22147.1|XRN1_YEAST RecName: Full=5'-3' exoribonuclease 1; AltName: Full=DNA strand
transfer protein beta; Short=STP-beta; AltName:
Full=KAR(-)-enhancing mutation protein; AltName:
Full=Strand exchange protein 1; AltName: Full=p175
gi|3847|emb|CAA38520.1| KEM1 protein [Saccharomyces cerevisiae]
gi|4413|emb|CAA43487.1| RAR5 [Saccharomyces cerevisiae]
gi|172580|gb|AAA35036.1| strand exchange protein 1 [Saccharomyces cerevisiae]
gi|172775|gb|AAA35125.1| DNA strand transferase beta [Saccharomyces cerevisiae]
gi|173192|gb|AAA35219.1| 5'-3' exoribonuclease [Saccharomyces cerevisiae]
gi|695728|emb|CAA59180.1| DNA strand transferase, exoribonuclease [Saccharomyces cerevisiae]
gi|1322778|emb|CAA96885.1| KEM1 [Saccharomyces cerevisiae]
gi|285812040|tpg|DAA07940.1| TPA: Xrn1p [Saccharomyces cerevisiae S288c]
gi|392299577|gb|EIW10671.1| Kem1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 1528
Score = 286 bits (731), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 160/411 (38%), Positives = 237/411 (57%), Gaps = 63/411 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MG+P F+R++++R+P+ I+ ++E G P EFDNLYLDMN I+
Sbjct: 1 MGIPKFFRYISERWPM-ILQLIE--------GTQIP-----------EFDNLYLDMNSIL 40
Query: 61 HPCFH--PDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C H D + ++VF I YIDH+F ++P+K+ Y+AIDGVAPRAKMNQQR R
Sbjct: 41 HNCTHGNDDDVTKRLTEEEVFAKICTYIDHLFQTIKPKKIFYMAIDGVAPRAKMNQQRAR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RFR A DA +A L+K E ++ K E DSN ITPGT+FMA L+ LQYF
Sbjct: 101 RFRTAMDAEKA------LKKAIENGDEI----PKGEPFDSNSITPGTEFMAKLTKNLQYF 150
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
I +++ W+ ++I S VPGEGEHKIM++IR ++ F+ NTRHC+YGLDADLI
Sbjct: 151 IHDKISNDSKWREVQIIFSGHEVPGEGEHKIMNFIRHLKSQKDFNQNTRHCIYGLDADLI 210
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
ML L+TH HF++LRE +T G +E +
Sbjct: 211 MLGLSTHGPHFALLREEVTF-------------GRRNSEKKS----------------LE 241
Query: 299 KKKYQFLNIWVLREYLQYEL-DIPNP-PFPINFERIVDDFVFLCFFVGNDFLPHMPTLEI 356
+ + L++ +LREY++ E +I + F NFERI+DDF+ + F +GNDFLP++P L +
Sbjct: 242 HQNFYLLHLSLLREYMELEFKEIADEMQFEYNFERILDDFILVMFVIGNDFLPNLPDLHL 301
Query: 357 REGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQK 407
+GA +L+ ++ GY+ + G++ L R+ ++ ++ +E F+K
Sbjct: 302 NKGAFPVLLQTFKEALLHTDGYINEHGKINLKRLGVWLNYLSQFELLNFEK 352
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 77/171 (45%), Positives = 101/171 (59%), Gaps = 2/171 (1%)
Query: 451 YKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFAS 510
+K YY DK + + E +KV+ D+ YVEGL WV YYY+ SW W+YP+HYAP S
Sbjct: 511 WKHEYYHDKLKFTTDSE-EKVR-DLAKDYVEGLQWVLYYYYRGCPSWSWYYPHHYAPRIS 568
Query: 511 DLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQ 570
DL D +I F L +PF PF QLM LP S + +P +R LM D SPI+ FYP + Q
Sbjct: 569 DLAKGLDQDIEFDLSKPFTPFQQLMAVLPERSKNLIPPAFRPLMYDEQSPIHDFYPAEVQ 628
Query: 571 IDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLY 621
+D NGK W+ VV + F+DEK L+ + L+ EE RN DL+Y
Sbjct: 629 LDKNGKTADWEAVVLISFVDEKRLIEAMQPYLRKLSPEEKTRNQFGKDLIY 679
>gi|268533038|ref|XP_002631647.1| C. briggsae CBR-XRN-1 protein [Caenorhabditis briggsae]
Length = 1183
Score = 286 bits (731), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 164/420 (39%), Positives = 244/420 (58%), Gaps = 56/420 (13%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP FYRW ++RYP + +V+ E Q+ EFDNLYLDMNGII
Sbjct: 1 MGVPKFYRWTSERYPC-LSEVINE-SQIP------------------EFDNLYLDMNGII 40
Query: 61 HPCFHPDGKPAP--TSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C HP+ + +++F +IF YI++++ L++P+K+ ++A+DGVAPRAKMNQQR R
Sbjct: 41 HNCSHPNDDDVTFRITEEEIFVNIFAYIENLYNLIKPQKVFFMAVDGVAPRAKMNQQRAR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RF +A+ A+ + ++ + G++L ++++ DSN ITPGT FM L L +
Sbjct: 101 RFMSAR-TAQTQMDQAIAK------GEVLPSEKR---FDSNCITPGTYFMTRLHEKLDAW 150
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
++ + WQ K+ILS NVPGEGEHKIM +IR +R G+DPNTRHC+YGLDADLI
Sbjct: 151 VREKSVSDTRWQGRKIILSGHNVPGEGEHKIMDFIRSERAGTGYDPNTRHCMYGLDADLI 210
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
ML + +HE HFS+LRE +T + K + KP T
Sbjct: 211 MLGIVSHEPHFSLLREEVTFNTRPRK-----------NDQKKKPK----------RTDSE 249
Query: 299 KKKYQFLNIWVLREYLQYEL-DIPNP-PFPINFERIVDDFVFLCFFVGNDFLPHMPTLEI 356
K + L++ +LREYL +E D+ PF + ERIVDD++ + VGNDFLPH+P++ I
Sbjct: 250 VKTFHLLHLSLLREYLAWEFADVKESLPFEYDMERIVDDWIMMGLLVGNDFLPHLPSIHI 309
Query: 357 REGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYE 416
+ A+ LL Y++ ++ Y+ ++G + L R EKF+ +++ + F + Q E
Sbjct: 310 HDDALPLLYSTYKKVLPSL-DYINESGYLNLARFEKFLAQLSLNDKNCFMDKLEDDQFME 368
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 72/167 (43%), Positives = 103/167 (61%), Gaps = 6/167 (3%)
Query: 451 YKERYYADKFEISNPEEIDKVK-KDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFA 509
+K+ YY+DK N I K + + YV + W YYY SW WFYP+HYAPF
Sbjct: 483 HKKYYYSDKLRYKN---ISKAELRAQAEGYVRAIQWNLHYYYHGCVSWSWFYPHHYAPFI 539
Query: 510 SDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLM-TDPS-SPIYKFYPP 567
SD++ +D++I F L +PF+PF+QL+ LP AS LP + LM +DP+ S I+ FYP
Sbjct: 540 SDVQGFADMKIEFELSKPFQPFEQLLAVLPEASRDCLPRPLQELMSSDPAQSAIHDFYPS 599
Query: 568 DFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNS 614
F+ D+NGK+ W+ VV +PFI+EK LL + + L++EE RN+
Sbjct: 600 KFETDLNGKKNDWEAVVLIPFIEEKRLLEAIESKQNRLSQEEKMRNT 646
>gi|449703901|gb|EMD44256.1| 5'3' exonuclease domain containing protein [Entamoeba histolytica
KU27]
Length = 670
Score = 285 bits (730), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 203/646 (31%), Positives = 322/646 (49%), Gaps = 73/646 (11%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP+ + W+ P + + P++ GE + + N G E+DNLY+D NGII
Sbjct: 1 MGVPSLFAWVRQICPGYVKRL---PPKIQGE------EKREKNEIGEEYDNLYIDFNGII 51
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
H C H + + TS +++ + IF +D VRPRK++++ +DGV P AK+ QQR RR+
Sbjct: 52 HQCSHSEKEEEATSEEEIMERIFKAMDRYVNYVRPRKMIFIGVDGVCPVAKIIQQRKRRY 111
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQ 180
+ + DSN ITPGT+FM + AL +I
Sbjct: 112 CSVLNNTGG--------------------------FDSNCITPGTKFMEKIGIALHGYIV 145
Query: 181 ARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
R++ W KVILSD+ V GEGEHKI +IR + RHC+YG+D DLI+L
Sbjct: 146 NRMDNDLYWSGLKVILSDSKVAGEGEHKIYEFIRKEIKKNERFKEERHCIYGMDGDLIIL 205
Query: 241 SLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADW-NGVDDTPIHK 299
+L + + +ILRE + + KC +CG+ H + HGK + N + I++
Sbjct: 206 TLGINIRNMTILREEQEIIKKNNKCDICGK-KHKTKD-HGKETKLIMCYPNELRKWLINE 263
Query: 300 KKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREG 359
K ++ + + I E I+ DF+ + F VGNDFLP +P+++I+ G
Sbjct: 264 AKKN-----LIETKKEEGEEYKEEDIEIIEEEIIKDFILISFLVGNDFLPRIPSIKIQTG 318
Query: 360 AINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIF----QKRTRIQQAY 415
+ +L+ Y + + G L+ E+ + ++ + + E I Q + ++
Sbjct: 319 GMEMLLKNYWKLYVK-GKRLSKGTEINITNFKELFKMIGEEESNILKGIIQNTKKDKEVK 377
Query: 416 EYNEAMKLNARRESSEELLQAPVAVADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDV 475
EY++ + ++ +E +KL + GY +RYY F +N E I +++
Sbjct: 378 EYDQNIYFDSSKE---------------IKLNKEGYHDRYYQIHFNTTNIEFI----QNI 418
Query: 476 VLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASD--LKDLSDLEITFFLGEPFRPFDQ 533
V Y EG+ W+ YY + SW+W+Y +HYAPFA D L + I+F P P +Q
Sbjct: 419 VHHYFEGISWIFNYYLNTLPSWRWYYKFHYAPFALDFALYLNENDSISFSSDTPILPLEQ 478
Query: 534 LMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKL 593
L+ LP S LP K + + P+SPI ++ F+ID+NG+ ++GV LP ID L
Sbjct: 479 LLAVLPPQSFINLPSKLAHFVLSPTSPILHYFNTSFKIDINGENKLYKGVPLLPDIDINL 538
Query: 594 LLRQTKKLEVFLTEEELFRNSVM-LDLLYV--HPQHPLYQQI-TLY 635
L LE L EL RN ++ ++LYV + PL+ +I +LY
Sbjct: 539 LHSFVFNLEHSLPPSELKRNILLPFNILYVTKNSSLPLFSKIQSLY 584
>gi|67480967|ref|XP_655833.1| 5'-3' exonuclease domain containing protein [Entamoeba histolytica
HM-1:IMSS]
gi|56472997|gb|EAL50447.1| 5'-3' exonuclease domain containing protein [Entamoeba histolytica
HM-1:IMSS]
Length = 666
Score = 285 bits (730), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 203/646 (31%), Positives = 322/646 (49%), Gaps = 73/646 (11%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP+ + W+ P + + P++ GE + + N G E+DNLY+D NGII
Sbjct: 1 MGVPSLFAWVRQICPGYVKRL---PPKIQGE------EKREKNEIGEEYDNLYIDFNGII 51
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
H C H + + TS +++ + IF +D VRPRK++++ +DGV P AK+ QQR RR+
Sbjct: 52 HQCSHSEKEEEATSEEEIMERIFKAMDRYVNYVRPRKMIFIGVDGVCPVAKIIQQRKRRY 111
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQ 180
+ + DSN ITPGT+FM + AL +I
Sbjct: 112 CSVLNNTGG--------------------------FDSNCITPGTKFMEKIGIALHGYIV 145
Query: 181 ARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
R++ W KVILSD+ V GEGEHKI +IR + RHC+YG+D DLI+L
Sbjct: 146 NRMDNDLYWSGLKVILSDSKVAGEGEHKIYEFIRKEIKKNERFKEERHCIYGMDGDLIIL 205
Query: 241 SLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADW-NGVDDTPIHK 299
+L + + +ILRE + + KC +CG+ H + HGK + N + I++
Sbjct: 206 TLGINIRNMTILREEQEIIKKNNKCDICGK-KHKTKD-HGKETKLIMCYPNELRKWLINE 263
Query: 300 KKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREG 359
K ++ + + I E I+ DF+ + F VGNDFLP +P+++I+ G
Sbjct: 264 AKKN-----LIETKKEEGEEYKEEDIEIIEEEIIKDFILISFLVGNDFLPRIPSIKIQTG 318
Query: 360 AINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIF----QKRTRIQQAY 415
+ +L+ Y + + G L+ E+ + ++ + + E I Q + ++
Sbjct: 319 GMEMLLKNYWKLYVK-GKRLSKGTEINITNFKELFKMIGEEESNILKGIIQNTKKDKEVK 377
Query: 416 EYNEAMKLNARRESSEELLQAPVAVADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDV 475
EY++ + ++ +E +KL + GY +RYY F +N E I +++
Sbjct: 378 EYDQNIYFDSSKE---------------IKLNKEGYHDRYYQIHFNTTNIEFI----QNI 418
Query: 476 VLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASD--LKDLSDLEITFFLGEPFRPFDQ 533
V Y EG+ W+ YY + SW+W+Y +HYAPFA D L + I+F P P +Q
Sbjct: 419 VHHYFEGISWIFNYYLNTLPSWRWYYKFHYAPFALDFALYLNENDSISFSSDTPILPLEQ 478
Query: 534 LMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKL 593
L+ LP S LP K + + P+SPI ++ F+ID+NG+ ++GV LP ID L
Sbjct: 479 LLAVLPPQSFINLPSKLAHFVLSPTSPILHYFNTSFKIDINGENKLYKGVPLLPDIDINL 538
Query: 594 LLRQTKKLEVFLTEEELFRNSVM-LDLLYV--HPQHPLYQQI-TLY 635
L LE L EL RN ++ ++LYV + PL+ +I +LY
Sbjct: 539 LHSFVFNLEHSLPPSELKRNILLPFNILYVTKNSSLPLFSKIQSLY 584
>gi|392350257|ref|XP_003750606.1| PREDICTED: 5'-3' exoribonuclease 1-like, partial [Rattus
norvegicus]
Length = 453
Score = 285 bits (728), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 173/491 (35%), Positives = 252/491 (51%), Gaps = 80/491 (16%)
Query: 48 EFDNLYLDMNGIIHPCFHP--DGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDG 105
EFDNLYLDMNGIIH C HP D S D +F IF Y++ +F +++PRK+ ++A+DG
Sbjct: 3 EFDNLYLDMNGIIHQCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDG 62
Query: 106 VAPRAKMNQQRTRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGT 165
VAPRAKMNQQR RRFR+AK+A E++++K E+ G+ L + + DSN ITPGT
Sbjct: 63 VAPRAKMNQQRGRRFRSAKEA------EDKIKKAIEK-GETLPTEAR---FDSNCITPGT 112
Query: 166 QFMAVLSAALQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPN 225
+FMA L L+YF+ +++ WQ + S PGEGEHKIM +IR ++ P DPN
Sbjct: 113 EFMARLHEHLKYFVNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPN 172
Query: 226 TRHCLYGLDADLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDN 285
TRHCLYGLDADLIML L +HE HFS+LRE + G++ + VC
Sbjct: 173 TRHCLYGLDADLIMLGLTSHEAHFSLLREEVRFGGKKTQR-VCAP--------------- 216
Query: 286 PADWNGVDDTPIHKKKYQFLNIWVLREYLQYELDI--PNPPFPINFERIVDDFVFLCFFV 343
++T H L++ ++REY+ YE F + E+I+DD++ + F V
Sbjct: 217 -------EETTFH-----LLHLSLMREYIDYEFSALKEKITFKYDIEKIIDDWILMGFLV 264
Query: 344 GNDFLPHMPTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQ 403
GNDF+PH+P L I A+ LL Y +GGY+ ++G + L R E+++ ++ ++ +
Sbjct: 265 GNDFIPHLPHLHINHDALPLLYGTYIAILPELGGYINESGHLNLPRFERYLVKLSDFDRE 324
Query: 404 IFQ--------------------------------KRTRIQQAYEYNEAMKLNARRE--- 428
F K R + E + + +RE
Sbjct: 325 HFSEVFVDLKWFESKVGNKYLNEAAGAAAEEAKSCKDKRKVKGQENSLSWAALDKREGEG 384
Query: 429 -SSEELLQAPVAVADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVC 487
+S + + D + YK YY K + D+ D YV+ + W+
Sbjct: 385 VASRDNFEDETEDDDLFETEFRQYKRTYYMTKMGVDVVS--DEFLADQAACYVQAIQWIL 442
Query: 488 RYYYQDVCSWQ 498
YYY V SW
Sbjct: 443 HYYYHGVQSWS 453
>gi|449687936|ref|XP_002167193.2| PREDICTED: 5'-3' exoribonuclease 1, partial [Hydra magnipapillata]
Length = 487
Score = 284 bits (727), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 178/514 (34%), Positives = 269/514 (52%), Gaps = 99/514 (19%)
Query: 101 LAIDGVAPRAKMNQQRTRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNV 160
+A+DG APRAKMNQQR+RRFR AK+A EA +RK ++ G+ L ++ DSN
Sbjct: 1 MAVDGCAPRAKMNQQRSRRFRTAKEAEEA------IRKAIQK-GQTLPPDDR---FDSNC 50
Query: 161 ITPGTQFMAVLSAALQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLP 220
ITPGT+FM L L+YF+ +++ P WQ + LS +VPGEGEHK+M +IR ++ P
Sbjct: 51 ITPGTEFMWRLQHQLKYFVNQKISSDPLWQECTIYLSGHDVPGEGEHKVMDFIRYCKSKP 110
Query: 221 GFDPNTRHCLYGLDADLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHG 280
+DPNTRHCLYGLDADLIML L+THE HFS+LRE I G+Q K +
Sbjct: 111 DYDPNTRHCLYGLDADLIMLGLSTHEPHFSLLREEIRY-GKQSKRLL------------- 156
Query: 281 KPGDNPADWNGVDDTPIHKKKYQFLNIWVLREYLQYELDIPNPPFPINF--ERIVDDFVF 338
+P + + + L++ +LREYL+ E I F ERI+DD++F
Sbjct: 157 RPDE---------------QTFHLLHLSLLREYLEMEFIIVKDLLHFRFDTERIIDDWIF 201
Query: 339 LCFFVGNDFLPHMPTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVA 398
L F VGNDF+PH+P + I A+ + +Y+ GYL D G + L R++KF + ++
Sbjct: 202 LGFLVGNDFVPHLPHMHINHDALPYIFKIYKEFLPTTDGYLNDGGMINLCRLKKFFEFLS 261
Query: 399 VYEDQIFQKRTRIQQAYEYNEAMKL------------------------------NARRE 428
++ + F + + E + KL ++
Sbjct: 262 KFDRERFHEVYADLKWLESKGSGKLLENSAGKKKFADVMRELALEELNEDLEEIRKSKLF 321
Query: 429 SSEELLQAPVAVA-DTVKLG----EPGYKERYYADKFEISNPEE-------------IDK 470
S+ + A ++ A D + L +PG K + D E+ + E ++K
Sbjct: 322 DSQYSINANISGAFDELSLNLTPEKPG-KLKTLNDDIEVEDDETFELEFQQHKRHYYMEK 380
Query: 471 VKKDVV-LKYVEGLC--------WVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDLEIT 521
D+ ++++ +C W+ YY+ + SW W+YPYHY+P+ SD+ + EI
Sbjct: 381 FDMDIADNEHIQTICTEYVIALQWISHYYFNGLQSWSWYYPYHYSPYISDVANFELKEIN 440
Query: 522 FFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMT 555
F +G PF PF+QL+ LPAAS LPE Y+ +++
Sbjct: 441 FEMGHPFLPFEQLLAVLPAASRKLLPEAYQVMIS 474
>gi|403221749|dbj|BAM39881.1| 5'-3' exoribonuclease 2 [Theileria orientalis strain Shintoku]
Length = 1374
Score = 283 bits (725), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 218/682 (31%), Positives = 312/682 (45%), Gaps = 161/682 (23%)
Query: 1 MGVPAFYRWLADRYPLSIVD--VVEED----------PQVDGEGVARPVDVSKPNPNGME 48
MG+P+F+RWLA+RYPL V D P+ + P+ +P P+G
Sbjct: 1 MGIPSFFRWLAERYPLICESQYVTTSDKGDAFKLLKSPETFKDSFNEPLFTYRP-PDG-- 57
Query: 49 FDNLYLDMNGIIHPCFHP--DGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGV 106
FDNLYLD+NGI+H C H D TS DD+F SIF I ++ +VRP+ LLYLA+DGV
Sbjct: 58 FDNLYLDVNGIVHNCSHSIADLCQNITSEDDIFVSIFQCIINLVNIVRPKSLLYLAVDGV 117
Query: 107 APRAKMNQQRTRRFRAAKDAAEAEAEEERLRK--EFEEAGKLLSAKEKPETCDSNVITPG 164
APRAK+ QQR RRFR+A +A + E L + + +E + +++ D ITPG
Sbjct: 118 APRAKIIQQRERRFRSASEATIQQLILESLTELGDQDEDTQGEETQKEEFKFDPIQITPG 177
Query: 165 TQFMAVLSAALQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIR---------- 214
T FM L+ LQ+F +N+ W+ K+++S + VPGEGEHKIM YIR
Sbjct: 178 TAFMERLTTRLQFFALKMINENELWRNLKIVVSGSEVPGEGEHKIMEYIRNDKARRHAEF 237
Query: 215 ---LQRNLPGFDPNTRHCLYGLDADLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQV 271
+ R PG P+ HC+YGLDADLI+LSLATHE + +LRE +
Sbjct: 238 ESEVHRREPGDTPHISHCVYGLDADLIVLSLATHEPYICLLREQVVF------------- 284
Query: 272 GHLAAECHGKPGDNPADWNGVDDTPIHKKKYQFLNIWVLREYLQYELDIPNPPFPINFER 331
GH+ + N +N +++ +R
Sbjct: 285 GHMKNSSKLRMMVN-------------------MNSYIM-------------------DR 306
Query: 332 IVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHVYRREF----------TAMGGY--- 378
+VDDFVFL FFVGNDFLPH+ I EG +N L+ +YR TA+G +
Sbjct: 307 VVDDFVFLTFFVGNDFLPHLLLANIPEGGLNELLQIYREYLDESFKSGPSSTAVGNHQNT 366
Query: 379 -----------LTDAGEVLLDRVEKFIQSVAVYE---------DQIFQKRTRIQQAYEYN 418
+ GEV D + F A YE ++I + + Q N
Sbjct: 367 LPQRNARDPWLTCNCGEVNFDNLMIFFTKWAKYENFKIQNYLTNEIVSRTSSKNQNTNNN 426
Query: 419 EAMKLNARR--------ESSEELLQAPVAVADTVKL------------GEPG----YKER 454
+ + N+ R + S+ V K+ EP YK R
Sbjct: 427 KVVSFNSNRVVMSHSVVDHSKHSSLITVIDVKNCKIETDLSDFISKYPNEPTTLLDYKNR 486
Query: 455 YYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKD 514
YY K ISN +K D + V +V V + P S +
Sbjct: 487 YYLAKMGISN----QLIKCD--MSSVNSRRYVLENGRIVVLT----------PLLSQV-- 528
Query: 515 LSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMN 574
L+I F G+P P++QLM LP S+ LP + L+T+ SP++++YP F +DM+
Sbjct: 529 ---LDIKFDKGKPITPYEQLMLVLPRQSAHFLPSVFSALITEQESPLHQYYPIHFDVDMD 585
Query: 575 GKRFAWQGVVKLPFIDEKLLLR 596
+ W G+ LP + L+L+
Sbjct: 586 NTKVPWGGITLLPSVPYSLMLQ 607
>gi|345487550|ref|XP_001601647.2| PREDICTED: 5'-3' exoribonuclease 2 homolog [Nasonia vitripennis]
Length = 828
Score = 283 bits (725), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 150/291 (51%), Positives = 194/291 (66%), Gaps = 10/291 (3%)
Query: 135 RLRKEFEEAGKLLS-AKEKPETCDSNVITPGTQFMAVLSAALQYFIQARLNQIPGWQFTK 193
R+R E G L K K + DSN ITPGT FMA LSA L Y+I RLN PGW+ K
Sbjct: 3 RIRSELALKGAFLPPEKPKEDHFDSNCITPGTPFMARLSACLHYYIHDRLNNDPGWKNIK 62
Query: 194 VILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIMLSLATHEIHFSILR 253
VILSDANVPGEGEHKIM YIR QR P DPNT+H L G DADLIML LATHE +F+I+R
Sbjct: 63 VILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHVLCGADADLIMLGLATHEPNFTIIR 122
Query: 254 EVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIHKKKYQFL--NIWVLR 311
E P + C +CGQ+GH +C G A+ N ++ I + QF+ + VLR
Sbjct: 123 EEFK-PNKPRPCDICGQLGHDMQDCLG------AEPNKKEEEKIFGSECQFIFVRLNVLR 175
Query: 312 EYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHVYRRE 371
EYL+ EL +PN PF +FER +DD+VF+CFFVGNDFLPH+P+LEIRE AI+ L+ +Y++
Sbjct: 176 EYLERELQMPNLPFKYDFERAIDDWVFMCFFVGNDFLPHLPSLEIRENAIDRLVTLYKKT 235
Query: 372 FTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYEYNEAMK 422
GG+LT++G+V LDRV+ + + ED+IF+KR + + A++ E K
Sbjct: 236 VYKTGGFLTNSGDVNLDRVQLILNDLGNVEDEIFKKRQQNELAFKAREKNK 286
Score = 195 bits (495), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 108/246 (43%), Positives = 146/246 (59%), Gaps = 13/246 (5%)
Query: 442 DTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFY 501
D V+L E G+K+RYY KF++ P+ + + +V L+YV GLCWV RYYYQ SW+W++
Sbjct: 386 DEVRLWEDGFKDRYYESKFDVL-PDNL-AFRNNVALQYVRGLCWVLRYYYQGCASWKWYF 443
Query: 502 PYHYAPFASDLKDLSDLEITFFLGE-PFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSP 560
PYHYAPFASD ++ L F G PFRP +QLMG PAAS +P + LM D +SP
Sbjct: 444 PYHYAPFASDFINIGGLSTEFERGTIPFRPLEQLMGVFPAASCKHVPAPWATLMKDSTSP 503
Query: 561 IYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLL 620
I FYP DF+ID+NGK+FAWQGV LPF+DE+ L + + LT E RN D L
Sbjct: 504 IIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLFKALEPYYGQLTVAEKKRNVRGDDRL 563
Query: 621 YVHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVNAS-GGMNGYIWLCERN-GLRSIIPS 678
YV P + + T LY +++ ++ +V GM G + L E G + +PS
Sbjct: 564 YVGPDNSGF---TFLKGLY-----ENKIGYDQEVEICIDGMRGTVLLAEDCVGEGATLPS 615
Query: 679 PVKGLP 684
P+ LP
Sbjct: 616 PINTLP 621
>gi|312371117|gb|EFR19377.1| hypothetical protein AND_22598 [Anopheles darlingi]
Length = 380
Score = 283 bits (725), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 162/415 (39%), Positives = 232/415 (55%), Gaps = 75/415 (18%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP F+R++++RYP + +++ E+ QV EFDNLYLDMNGII
Sbjct: 1 MGVPKFFRYISERYP-CLSELLREN-QVP------------------EFDNLYLDMNGII 40
Query: 61 HPCFHPDGKPAP--TSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C HP+ S + +F+ IF Y++++F ++RP+K+ ++A+DGVAPRAKMNQQR R
Sbjct: 41 HNCSHPNDADVTYRISEEMIFEGIFHYVEYLFKMIRPQKVFFIAVDGVAPRAKMNQQRGR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETC------DSNVITPGTQFMAVLS 172
RFR+A +A E +L +A K ET DSN ITPGT FM L
Sbjct: 101 RFRSAHEAGE----------------QLKAAIAKGETIPDEDRFDSNCITPGTAFMVRLQ 144
Query: 173 AALQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYG 232
AL++FIQ ++ W+ VILS PGEGEHKIM YIR + PGF+PNTRHCLYG
Sbjct: 145 KALEHFIQVKIATDILWKACTVILSGHETPGEGEHKIMEYIRHAKAQPGFNPNTRHCLYG 204
Query: 233 LDADLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGV 292
LDADLIML L THE FS+LRE + +K V ++
Sbjct: 205 LDADLIMLGLCTHERFFSLLREEVKFGKNDKKATVMKEI--------------------- 243
Query: 293 DDTPIHKKKYQFLNIWVLREYLQYEL-DIPNP-PFPINFERIVDDFVFLCFFVGNDFLPH 350
++ L++ +L EYL+ E + N FP + +++DD++ + + VGNDF+PH
Sbjct: 244 --------RFYLLHLTLLSEYLELEFASVRNKLRFPFDIHKLIDDWILMIYLVGNDFIPH 295
Query: 351 MPTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIF 405
+P L I E A+ L Y M GY+ ++G + L R++ ++ +AV++ F
Sbjct: 296 LPNLHINENALPTLYRAYMDVLPEMDGYINESGILNLPRLQLLMRRLAVFDRDTF 350
>gi|401842124|gb|EJT44395.1| XRN1-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 1526
Score = 281 bits (720), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 158/411 (38%), Positives = 236/411 (57%), Gaps = 63/411 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MG+P F+R++++R+P+ I+ ++E G P EFDNLYLDMN I+
Sbjct: 1 MGIPKFFRYISERWPM-ILQLIE--------GTQIP-----------EFDNLYLDMNSIL 40
Query: 61 HPCFH--PDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C H D + ++VF I YIDH+F ++P K+ Y+AIDGVAPRAKMNQQR R
Sbjct: 41 HNCTHGNDDDVTKRLTEEEVFAKICTYIDHLFQTIKPNKIFYMAIDGVAPRAKMNQQRAR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RFR A DA +A ++K E ++ K E DSN ITPGT+FMA L+ LQYF
Sbjct: 101 RFRTAMDAEKA------MKKAIENGDEI----PKGEPFDSNSITPGTEFMAKLTKNLQYF 150
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
I +++ W+ ++I S VPGEGEHKIM++IR ++ F+ NTRHC+YGLDADLI
Sbjct: 151 IHDKISNDSKWREVQIIFSGHEVPGEGEHKIMNFIRHLKSQKDFNQNTRHCIYGLDADLI 210
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
ML L+TH HF++LRE +T G +E +
Sbjct: 211 MLGLSTHGPHFALLREEVTF-------------GRRNSEKKS----------------LE 241
Query: 299 KKKYQFLNIWVLREYLQYEL-DIPNP-PFPINFERIVDDFVFLCFFVGNDFLPHMPTLEI 356
+ + L++ +LREY++ E +I + F +FERI+DDF+ + F +GNDFLP++P L +
Sbjct: 242 HQNFYLLHLSLLREYMELEFKEIADEMRFEYDFERILDDFILVMFVIGNDFLPNLPDLHL 301
Query: 357 REGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQK 407
+GA +L+ ++ GY+ + G++ L R+ ++ ++ +E F+K
Sbjct: 302 NKGAFPVLLQTFKEALLHTDGYINEHGKINLKRLGVWLDYLSQFELLNFEK 352
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 76/173 (43%), Positives = 100/173 (57%), Gaps = 6/173 (3%)
Query: 451 YKERYYADKFEISN--PEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPF 508
+K YY DK + ++ E + + KD YVEGL WV YYY+ SW W+YP+HYAP
Sbjct: 511 WKHEYYRDKLKYASDCEERVTDLSKD----YVEGLQWVLYYYYRGCPSWSWYYPHHYAPR 566
Query: 509 ASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPD 568
SDL D +I F L +PF PF QLM LP S + +P +R LM D SPI+ FYP +
Sbjct: 567 ISDLVKGLDQDIEFDLSKPFTPFQQLMAVLPERSKNLIPPAFRPLMYDEQSPIHDFYPAE 626
Query: 569 FQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLY 621
Q+D NGK W+ VV + F+DEK L+ + L+ EE RN DL+Y
Sbjct: 627 VQLDKNGKTADWEAVVLISFVDEKRLIEAMQPYLSKLSPEEKTRNQFGKDLIY 679
>gi|449019218|dbj|BAM82620.1| deoxyribonuclease [Cyanidioschyzon merolae strain 10D]
Length = 1527
Score = 281 bits (719), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 179/433 (41%), Positives = 234/433 (54%), Gaps = 73/433 (16%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP FYRWL++RYPL ++G PV S P DN YLDMNGI+
Sbjct: 1 MGVPRFYRWLSERYPL-----------ING-----PVSRSNAPP----VDNFYLDMNGIL 40
Query: 61 HPCFHPDGKP-APTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRR 119
H C P S +D++ +YID + L++P++LL+LA+DGVAPRAKMNQQR RR
Sbjct: 41 HNCARSAENPLGGRSDEDIYWESCNYIDMLVTLIQPKRLLFLAVDGVAPRAKMNQQRARR 100
Query: 120 F-------RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETC-DSNVITPGTQFMAVL 171
+ + A+ + + +RLR E EAG P+ DSN ITPGT FM L
Sbjct: 101 YRAATALEKVAETSHQRGNTTQRLRTE-SEAG--------PDRVFDSNCITPGTTFMHGL 151
Query: 172 SAALQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLY 231
S AL Y++ +L WQ +VI+S A VPGEGEHKIM YIR + PNTRHC+Y
Sbjct: 152 SRALLYYVAVKLESDRSWQDLEVIVSGAEVPGEGEHKIMEYIRQLKEQKRMPPNTRHCIY 211
Query: 232 GLDADLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNG 291
GLDADLI L L THE HF +LRE I K +
Sbjct: 212 GLDADLIFLGLVTHEPHFFLLREKIDFQAAFRKV----------------------RFEK 249
Query: 292 VDDTPIH---KKKYQFLNIWVLREYLQYE---LDIPNPPFPINFERIVDDFVFLCFFVGN 345
V T + + ++ L++ +LREYL E L+ P N ERI+DDFVF+ F VGN
Sbjct: 250 VTATKMDRDIRGDFELLSLGILREYLSLEFAYLEKRLPAGVYNLERIIDDFVFVAFLVGN 309
Query: 346 DFLPHMPTLEIREGAINLLMHVYRREFTAMGGYLTDAGE-------VLLDRVEKFIQSVA 398
DF+PH PTLEIREGA+N ++ +Y+ GGYLT+A + DRVE + +
Sbjct: 310 DFMPHSPTLEIREGALNSILFLYKELLPRFGGYLTEATGKARNPKLINFDRVEILLSKLG 369
Query: 399 VYEDQIFQKRTRI 411
+ E I +KR +
Sbjct: 370 LLESYILEKRATV 382
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 68/147 (46%), Positives = 83/147 (56%), Gaps = 3/147 (2%)
Query: 451 YKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFAS 510
YK RYY +K I + V++ + Y+E + W YY V SW+WFYPYHYAPF S
Sbjct: 502 YKRRYYHEKLGIDYDHDAAAVRR-ICRSYLEAIVWTLEYYLNGVASWRWFYPYHYAPFCS 560
Query: 511 DLKDLSDL--EITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPD 568
D+ L L EI G PF P QL+ LP S+ LP Y LMTD SSP+ YP
Sbjct: 561 DMVGLQALAQEIRLEQGTPFLPLQQLLAVLPPRSAWCLPPAYAKLMTDTSSPLADLYPSQ 620
Query: 569 FQIDMNGKRFAWQGVVKLPFIDEKLLL 595
IDM GKR W+G+V LPF+DE L
Sbjct: 621 VAIDMQGKRNEWEGIVLLPFMDENRLF 647
>gi|50293237|ref|XP_449030.1| hypothetical protein [Candida glabrata CBS 138]
gi|49528343|emb|CAG62000.1| unnamed protein product [Candida glabrata]
Length = 1522
Score = 281 bits (718), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 154/411 (37%), Positives = 237/411 (57%), Gaps = 63/411 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MG+P F+R++++R+P+ I+ ++E G P EFDNLYLDMN I
Sbjct: 1 MGIPKFFRYISERWPM-ILQLIE--------GTQIP-----------EFDNLYLDMNSFI 40
Query: 61 HPCFHPD---GKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRT 117
H C H + G S ++++ IF YIDH+FL+++P+K+ Y++IDGVAPRAKMNQQR+
Sbjct: 41 HTCTHGNDDEGVTQKMSDEELYSRIFTYIDHLFLMIKPKKVFYMSIDGVAPRAKMNQQRS 100
Query: 118 RRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQY 177
RRFR A D +A L+K +E ++ K + DSN ITPGT+FMA L+ L Y
Sbjct: 101 RRFRTAMDTEKA------LQKAMDEGEEI----PKGDAFDSNCITPGTEFMAQLTRNLNY 150
Query: 178 FIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADL 237
+I ++ W+ +VILS VPGEGEHKIM +IR +D NTRHC+YGLDADL
Sbjct: 151 YIHDKVTNDANWRDIEVILSGHEVPGEGEHKIMDFIRNITAQEDYDVNTRHCIYGLDADL 210
Query: 238 IMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPI 297
IML L+TH HF++LRE +T G++ N + +
Sbjct: 211 IMLGLSTHAPHFALLREEVTF-GRR---------------------------NNSRNKNL 242
Query: 298 HKKKYQFLNIWVLREYLQYELDI--PNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLE 355
++ + L++ +LREYL+ E + F +FE I+DDF+ + F +GNDFLP++P L
Sbjct: 243 EEQNFYLLHLSLLREYLELEFKEIGDDLQFEFDFENILDDFILVMFVIGNDFLPNLPDLH 302
Query: 356 IREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQ 406
+ +GA +L+ ++ + GY+ + G++ R++ ++ ++ +E F+
Sbjct: 303 LNKGAFPVLLQTFKEALLHVDGYINERGQINFKRLKVWLDYLSQFELMNFE 353
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 80/176 (45%), Positives = 97/176 (55%), Gaps = 6/176 (3%)
Query: 450 GYKERYYADKFEISN--PEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAP 507
+K YY KF I PE I ++ + YVEGL WV YYYQ SW W+Y +HYAP
Sbjct: 513 NWKAEYYRSKFGIKRDEPERIVEIANN----YVEGLQWVLYYYYQGCPSWSWYYHFHYAP 568
Query: 508 FASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPP 567
SDL D I F G P PF QLM LP S + LP YR LM DP SPI FYP
Sbjct: 569 RISDLAKGLDQIIKFEQGSPLTPFQQLMAVLPERSKNLLPAAYRPLMYDPKSPILDFYPS 628
Query: 568 DFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVH 623
+ Q+D NGK W+ VV LPF+DE L+ T L+ EE RNS +L +++
Sbjct: 629 EVQLDKNGKTADWEAVVLLPFVDENRLIEATNHCLAKLSPEEKQRNSFGKNLTFMY 684
>gi|68070139|ref|XP_676981.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56496914|emb|CAH93788.1| conserved hypothetical protein [Plasmodium berghei]
Length = 635
Score = 281 bits (718), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 196/666 (29%), Positives = 309/666 (46%), Gaps = 144/666 (21%)
Query: 2 GVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGIIH 61
G+P Y+WL YP V E ++ G + VD+ Y+DMNG+IH
Sbjct: 36 GIPRMYKWLTSYYP-----TVRE--ELINYGQKKKVDI------------FYIDMNGVIH 76
Query: 62 PCFHPDGKPAPTSYD-DVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
C H + P + ++F +I Y+ ++F LV+P+KL+Y+ +DGV+P+AKMNQQR RRF
Sbjct: 77 HCTHANKDALPIHDEHELFSNILHYLKNLFYLVKPQKLVYIGVDGVSPKAKMNQQRKRRF 136
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQ 180
+ K+ + + N IT GT FM ++ +L + +
Sbjct: 137 LSL--------------------FKINDNSKITNLFNPNCITTGTDFMYKINLSLNKWFK 176
Query: 181 ARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQ-RNLPGFDPNTRHCLYGLDADLIM 239
+ + F +I S ++VPGEGEHKI+ +IR +N F N HC+YGLDADLIM
Sbjct: 177 ILK-KKKVFNFD-IIYSGSDVPGEGEHKILKFIRENCKNDSNF-KNWNHCIYGLDADLIM 233
Query: 240 LSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKP----------------- 282
LSL TH + ILR+ L V + + +E +
Sbjct: 234 LSLVTHLNNIFILRDKFKLTNDSMHNNVVNNIEKMQSEFNVNSESDPNEVDNNEKEISIN 293
Query: 283 ---------------GDNPADWNGVDDTPIHKKKY------------QFLNIWVLREYLQ 315
G+N + N + T + Y + L+I+ LR ++
Sbjct: 294 RELKEIDKSEENKNMGNNESLNNCFNKTHKYTHDYYLHYDELNSYDFEILDIYKLRSSIK 353
Query: 316 YELDI--------PNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHV 367
++ N F IN R+VDD VFL F VGNDFLPH+P ++I EG++N +++
Sbjct: 354 TQIATYINKLKKEKNIIFSIN--RVVDDIVFLSFLVGNDFLPHIPNIDINEGSMNEILNS 411
Query: 368 YRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYEYNEAMKLNARR 427
Y Y+T +V ++R++ ++ ++ E Q F+KR + E+ +
Sbjct: 412 YIFYIYKYSNYITYKDKVHIERLKIILKILSGQEYQYFKKRGINENIPEFTD-------- 463
Query: 428 ESSEELLQAPVAVADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVC 487
E YK YY KF +S+ ++I ++ V KY+EGL W
Sbjct: 464 --------------------EKKYKSYYYLHKFGVSDSKQIQQI----VKKYIEGLFWNL 499
Query: 488 RYYYQDVCSWQWFYPYHYAPFASDLKDLSDLEITF--------FLGEPFRPFDQLMGTLP 539
YY+ SW W YPYHYAP SDL + F +G+P+ + L+ LP
Sbjct: 500 HYYHFGCASWHWEYPYHYAPLCSDLLSFEKSDFFFEKVTMPHKIIGKPYSAYTHLISVLP 559
Query: 540 AASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFID----EKLLL 595
+ LP+ Y+N+ + + F+P + +ID NGK+ W+ +V LPFI+ K++
Sbjct: 560 QKDKNLLPDPYKNVYAE--DEVKSFFPDNVKIDPNGKKETWEYIVHLPFINCNMINKIVS 617
Query: 596 RQTKKL 601
++KK+
Sbjct: 618 EKSKKI 623
>gi|171694057|ref|XP_001911953.1| hypothetical protein [Podospora anserina S mat+]
gi|170946977|emb|CAP73781.1| unnamed protein product [Podospora anserina S mat+]
Length = 1419
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 167/437 (38%), Positives = 240/437 (54%), Gaps = 70/437 (16%)
Query: 3 VPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGIIHP 62
VP F+RWL++RYP +I ++ E+ EFD LYLDMNGIIH
Sbjct: 1 VPKFFRWLSERYP-AISQLIAEN-------------------RIPEFDCLYLDMNGIIHN 40
Query: 63 CFHPDG---KPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRR 119
C H D + A S + +F +IF+YI+H+F ++P+ L ++AIDGVAPRAKMNQQR RR
Sbjct: 41 CTHKDSDDVQQARISEEQMFIAIFNYIEHLFGKIKPKTLFFMAIDGVAPRAKMNQQRARR 100
Query: 120 FRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFI 179
FR A DA ER R + + GK L KE P DSN ITPG + +L+YFI
Sbjct: 101 FRTALDA-------ERARDKAIQEGKELP-KEPP--FDSNCITPGMLLPPDVWFSLKYFI 150
Query: 180 QARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIM 239
++++ WQ +++LS VPGEGEHKIM YIR R P ++PN RHCLYGLDADLIM
Sbjct: 151 NKKVSEDKDWQGPEIVLSGHEVPGEGEHKIMEYIRNARAQPDYNPNVRHCLYGLDADLIM 210
Query: 240 LSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIHK 299
L L +H+ HF +LRE + Q G + + K +
Sbjct: 211 LGLLSHDPHFCLLREEV-------------QFGRVKDQHKVK--------------ELEH 243
Query: 300 KKYQFLNIWVLREYLQY---ELDIPNP-PFPINFERIVDDFVFLCFFVGNDFLPHMPTLE 355
+ + +++ ++REYL+ EL +P P P + E+++DDF+ + FFVGNDFLP++P
Sbjct: 244 QNFYLMHLCIVREYLELEFQELKVPGAIPMPFDMEKVIDDFILMAFFVGNDFLPNLPRFH 303
Query: 356 IREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRT------ 409
I EGA+ + +Y+ GY+ + G V L R+ ++ + E + F+
Sbjct: 304 INEGALATMFKIYKEVLRKCDGYINENGRVNLKRLAILLEELGREEYRFFEHENEDAGWL 363
Query: 410 RIQQAYEYNEAMKLNAR 426
R ++ E++EA AR
Sbjct: 364 RGKKMLEHDEAEIARAR 380
Score = 159 bits (403), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 82/194 (42%), Positives = 116/194 (59%), Gaps = 2/194 (1%)
Query: 451 YKERYYADKF-EISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFA 509
+K+ YY DKF E + + D+++K + YV+GL WV YYY+ + SW WFY YHY+P
Sbjct: 504 WKDGYYKDKFPEWAEGKHEDELRK-LAENYVQGLQWVLFYYYRGIASWPWFYRYHYSPLV 562
Query: 510 SDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDF 569
SD+ ++ F LG+PFRP +QLMG LP S S +P Y LMTD SPI FYP DF
Sbjct: 563 SDVVKGLGADLNFTLGQPFRPNEQLMGVLPDRSKSIVPTVYWPLMTDKDSPIIDFYPRDF 622
Query: 570 QIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVHPQHPLY 629
++DMNGK+ W+ VVK+PFIDEK LL L++EE RN + L + + +
Sbjct: 623 ELDMNGKKMDWEAVVKIPFIDEKRLLDAMAPKNDLLSDEEKARNDFGVALKFTYSPDVDF 682
Query: 630 QQITLYCQLYHQLP 643
+ + ++ +P
Sbjct: 683 EYASSLVDVFPHIP 696
>gi|145506154|ref|XP_001439043.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124406216|emb|CAK71646.1| unnamed protein product [Paramecium tetraurelia]
Length = 1199
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 190/622 (30%), Positives = 311/622 (50%), Gaps = 84/622 (13%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP FY WL+ RYP+ + +G + D LYLDMN +I
Sbjct: 1 MGVPNFYSWLSKRYPMCKYPFTKH--------------------HGHQIDFLYLDMNQVI 40
Query: 61 HPCFHPDG----KPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQR 116
+ C S + ++ SI +YID I LV P+ ++YL DGVAPRAK NQQR
Sbjct: 41 YKCATNQTILKDYMIEKSIESLWTSILNYIDTIINLVDPQLVIYLTFDGVAPRAKANQQR 100
Query: 117 TRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQ 176
RRF ++K A+ ++ K L +++ T +N IT GT+FM L+ ++
Sbjct: 101 QRRFASSKGDAK-----------IKQLLKQLDLEQQNHTFKNNQITAGTEFMYELNEQVK 149
Query: 177 YFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDAD 236
+FI + + + +VI S ++VPGEGEHKI+ ++R +N F+P+ HC+Y DAD
Sbjct: 150 FFINRKFKEDEKYANLQVIFSGSDVPGEGEHKILEFMRGIKNQQNFNPDWTHCIYSADAD 209
Query: 237 LIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTP 296
LIML L H + SI+RE + Q + C +
Sbjct: 210 LIMLGLGIHLKYVSIIREQSNM-DQIKTQIACKR-------------------------S 243
Query: 297 IHKKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEI 356
I K++ +N+ +++EYL E P N +R++DDF+ L F +GNDFLP + +I
Sbjct: 244 IETVKFELINLQIVKEYLDLEYKTIQMKIPYNIDRVIDDFLLLFFLIGNDFLPRVYCFDI 303
Query: 357 REGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYE 416
++G + LL+ ++ Y+T G + + +Q ++ +E + +KR E
Sbjct: 304 KQGTVELLIDTFKSFLEQCDEYVTQDGWINWKSMSLLVQVLSKFEIKAIEKRVE-----E 358
Query: 417 YNEAMKLNARRESSEELLQ--APVAVADTVKL-----GEPGYKERYYADKFEIS-NPEEI 468
+ +K E + +Q + + + D + + ++ +Y K +I + EE
Sbjct: 359 LKKQIKDTDNPEYQDYKIQWESELKILDALNIQFSNNNSVVARKLFYESKCQIDIDTEEG 418
Query: 469 DKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDL-----KDLSDLEITFF 523
K ++LKY+EG +V YYY V SW+W+Y Y+Y+P DL K+ + +I F
Sbjct: 419 KKELDKIILKYLEGFQFVLSYYYHGVPSWEWYYSYYYSPMCFDLCVYLSKNQIE-KIQFG 477
Query: 524 LGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYK---FYPPDFQIDMNGKRFAW 580
+P+ PF QL+ LP +++ LP +R L D SP+ K +YP +++ID G +
Sbjct: 478 QSKPYDPFQQLLLILPPHNANLLPAPFRGLY-DLESPLRKPFDYYPDEYEIDPFGAIWEH 536
Query: 581 QGVVKLPFIDEKLLLRQTKKLE 602
Q + K+PF++ LL+ + KK++
Sbjct: 537 QFICKVPFMNSDLLISEYKKID 558
>gi|221055850|ref|XP_002259063.1| 5'-3' exoribonuclease [Plasmodium knowlesi strain H]
gi|193809134|emb|CAQ39836.1| 5'-3' exoribonuclease, putative [Plasmodium knowlesi strain H]
Length = 648
Score = 279 bits (714), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 193/655 (29%), Positives = 299/655 (45%), Gaps = 129/655 (19%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
G+P Y+WL YP V EE DG+ E D Y+DMNG+I
Sbjct: 61 FGIPRMYKWLTSYYPT----VREELMTNDGQK---------------EVDIFYVDMNGVI 101
Query: 61 HPCFHPDGKPAPTSYD-DVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRR 119
H C H + + P + ++ +I Y+ ++F LV+PRKL+Y+ +DGV+P+AKMNQQR RR
Sbjct: 102 HHCTHANKETLPVHDEHELLSNILKYLKNLFHLVKPRKLVYVGVDGVSPKAKMNQQRKRR 161
Query: 120 FRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFI 179
F + K+ + N IT GT FM ++ +L +
Sbjct: 162 FLSL--------------------FKVSDNSNGTNLFNPNCITTGTDFMYKINLSLNKWF 201
Query: 180 QARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIM 239
Q L + + F VI S ++VPGEGEHKI+ +IR N HC+YGLDADLIM
Sbjct: 202 QI-LKKKEIFPFD-VIFSGSDVPGEGEHKILKFIRENCKRDVAFRNYSHCIYGLDADLIM 259
Query: 240 LSLATHEIHFSILREVITLPGQQEKCFV---------CGQVGHLAAECHGKPGDNPADWN 290
LSL TH + ILR+ + + + Q G D + +
Sbjct: 260 LSLVTHLNNIFILRDKYKMTNDSQVTLLENFEKAQRDFDQAKESQNTYQGGDMDKTNERD 319
Query: 291 GVDDT----------------------------------PIHKKKYQFLNIWVLREYLQY 316
VD+T P++ ++ L+++ LR ++
Sbjct: 320 NVDNTNEADSSLDSALPPAQRNPFCRIHHYTQDYYVNCEPLNSYDFEILDVYKLRNSIRT 379
Query: 317 ELDI------PNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHVYRR 370
++ N R+VDD VFL F VGNDFLP +P ++I EG++N +++ Y
Sbjct: 380 QIATYINKLKKEKNVIFNISRVVDDIVFLSFLVGNDFLPQIPHIDINEGSMNEILNAYIY 439
Query: 371 EFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYEYNEAMKLNARRESS 430
Y+T +V + R++ ++ ++ E F KR + E+ +
Sbjct: 440 YIYRYNNYITLKDKVHIQRLKIILKILSAQEFSYFLKRGNEENILEFTD----------- 488
Query: 431 EELLQAPVAVADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYY 490
E YK YY KF + +P++I + +V KY+EGL W YY
Sbjct: 489 -----------------ERRYKSYYYLQKFGVEDPKQI----QHIVKKYIEGLFWNLHYY 527
Query: 491 YQDVCSWQWFYPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKY 550
+ SW W YPYHYAP SDL + F G+P+ + L+ LP ++ LPE Y
Sbjct: 528 HFGCASWCWEYPYHYAPLCSDLLSFEKSDFFFEKGKPYSAYTHLISVLPQKDNNLLPEAY 587
Query: 551 RNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFID----EKLLLRQTKKL 601
+N+ ++ + F+P + +ID NGK+ W+ +V LPFI+ K++ ++KK+
Sbjct: 588 KNIYSE--DEVKSFFPENVRIDPNGKKETWEYIVHLPFINCNTINKIITERSKKI 640
>gi|167377811|ref|XP_001734553.1| 5'->3' exoribonuclease [Entamoeba dispar SAW760]
gi|165903890|gb|EDR29281.1| 5'->3' exoribonuclease, putative [Entamoeba dispar SAW760]
Length = 662
Score = 278 bits (712), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 202/643 (31%), Positives = 320/643 (49%), Gaps = 61/643 (9%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP+ + W+ P + + +E + G+ D + N G E+DNLY+D NGII
Sbjct: 1 MGVPSLFAWVKQICPKYVKRLPKE---IQGK------DKREKNETGEEYDNLYIDFNGII 51
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
H C H + + S +++ + IF ID VRPRK++++ +DGV P AK+ QQR RR+
Sbjct: 52 HQCSHSEKEEEAKSEEEIMERIFKEIDRYVNYVRPRKMIFIGVDGVCPVAKIIQQRKRRY 111
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQ 180
S DSN ITPGT+FM + AL +I
Sbjct: 112 --------------------------CSIINNNGGFDSNSITPGTKFMEKIGIALHGYIV 145
Query: 181 ARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
R++ W +VILSD+ V GEGEHKI +IR + RHC+YG+D DLI+L
Sbjct: 146 NRMDNDIYWSGLRVILSDSKVAGEGEHKIYEFIRKEIEKNCKFKEERHCIYGMDGDLIIL 205
Query: 241 SLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADW-NGVDDTPIHK 299
+L + + +ILRE + + KC +CG+ H + HGK + N + I++
Sbjct: 206 TLGINITNMTILREEQEIIKKNIKCDICGK-KHKTKD-HGKETKLIMCYPNELRKWLINE 263
Query: 300 -KKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIRE 358
KK +E E I E I++DF+ + F VGNDFLP +P+++I+
Sbjct: 264 AKKNLIETKKEEKEKKGEEYKEEEEEINIIEEEIINDFILISFLVGNDFLPRIPSIKIQT 323
Query: 359 GAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYEYN 418
+ +L+ Y + + G L+ E+ + ++ + + E I ++ + + +
Sbjct: 324 RGMEILLKNYWKLYVK-GKRLSKGTEINIKNFKELFKMIGEEESNILKEIIQNTKKDKEV 382
Query: 419 EAMKLNARRESSEELLQAPVAVADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLK 478
+ N +SS+E +KL + GY +RYY F +N E I +++V
Sbjct: 383 KVYDQNIYFDSSKE-----------IKLNQEGYHDRYYQIHFNTTNIEFI----QNIVHH 427
Query: 479 YVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASD--LKDLSDLEITFFLGEPFRPFDQLMG 536
Y EG+ WV YY + SW+W+Y +HYAPFA D L + I+F P P +QL+
Sbjct: 428 YFEGISWVFNYYLNKLPSWRWYYKFHYAPFALDFALYLNENDSISFSSDTPILPLEQLLS 487
Query: 537 TLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLR 596
LP S + +P K + + P+SPI ++ F+ID+NG+ ++G+ LP ID LL
Sbjct: 488 VLPPHSFNNIPSKLAHFVLSPNSPILHYFNTSFKIDINGENKLYKGIPLLPNIDIDLLHS 547
Query: 597 QTKKLEVFLTEEELFRNSVM-LDLLYV--HPQHPLYQQI-TLY 635
LE+ L + RN ++ ++LYV + PL+ +I +LY
Sbjct: 548 FVFDLELSLPPSDFKRNILLPFNILYVTKNSSLPLFSKIQSLY 590
>gi|443920066|gb|ELU40060.1| exonuclease Kem1, putative [Rhizoctonia solani AG-1 IA]
Length = 1536
Score = 278 bits (711), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 152/383 (39%), Positives = 211/383 (55%), Gaps = 47/383 (12%)
Query: 74 SYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRFRAAKDAAEAEAEE 133
S D +F +IF Y+DH+F ++PRKL ++AIDGVAPRAKMNQQR RRFR AKDA EA +
Sbjct: 384 SEDQIFTAIFSYVDHLFGKIKPRKLFFMAIDGVAPRAKMNQQRARRFRTAKDAKEAREKA 443
Query: 134 ERLRKEFEEAGKLLSAKEKPETCDSNVITPG-----TQFMAVLSAALQYFIQARLNQIPG 188
E+ ++ E + DSN ITPG T FM LS L+YF+ ++++
Sbjct: 444 EKKGEKLPEE----------KAFDSNCITPGMHPLGTVFMKKLSEQLKYFVNKKISEDAN 493
Query: 189 WQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIMLSLATHEIH 248
W+ +V+LS VPGEGEHKIM YIRL + P +DPN RHCLYGLDADLIML L +H+ H
Sbjct: 494 WREVQVVLSGHEVPGEGEHKIMEYIRLSKAQPDYDPNVRHCLYGLDADLIMLGLLSHDPH 553
Query: 249 FSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIHKKKYQFLNIW 308
F +LRE + Q+ K + + + L+I
Sbjct: 554 FCLLREEVKFGPQKNKS----------------------------KGSLETQSFYLLHIS 585
Query: 309 VLREYLQYELD--IPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMH 366
+LREYL E PF + ERI+DDFV + F+GNDFLPH+P L I E A+ L
Sbjct: 586 LLREYLDLEFQSLTSTLPFQYDLERIIDDFVLIAVFIGNDFLPHLPDLHIHENALERLFE 645
Query: 367 VYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYEYNEA--MKLN 424
+Y+ GGYL ++GE+ R++ + +A +E +F+K T Q Y+ + +
Sbjct: 646 IYKAVLPNAGGYLNESGEIHRGRLQLILDELATWEVDVFEKETSDSQWYKGKQRKHQQQA 705
Query: 425 ARRESSEELLQAPVAVADTVKLG 447
A + S+ L + + D V G
Sbjct: 706 AEKSKSKPLSDLAMKIQDLVHQG 728
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 87/173 (50%), Positives = 112/173 (64%), Gaps = 3/173 (1%)
Query: 442 DTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFY 501
D +K +KE YY +K E ++I+K +V +Y+EGL WV YYY+ V SW WFY
Sbjct: 821 DRLKAALKKWKEDYYKEKLEF---KDIEKGVDQLVYRYIEGLQWVMYYYYRGVASWGWFY 877
Query: 502 PYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPI 561
YHYAP SD+K++ E + LG+PF+PF+QLMG LP AS +PE YR LM SPI
Sbjct: 878 DYHYAPRISDIKNIELFEFNYELGKPFKPFEQLMGVLPYASHELIPEAYRELMHSEHSPI 937
Query: 562 YKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNS 614
FYP +F +DMNGK+ W+ VVK+PFID+K LL LE LTEEE RN+
Sbjct: 938 LDFYPENFDLDMNGKKQEWEAVVKVPFIDQKRLLSSMATLEHRLTEEEKRRNT 990
>gi|167521441|ref|XP_001745059.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163776673|gb|EDQ90292.1| predicted protein [Monosiga brevicollis MX1]
Length = 235
Score = 277 bits (709), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 140/258 (54%), Positives = 182/258 (70%), Gaps = 27/258 (10%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP F+ WLA RYP SIV V+ E ++PNP G+EFDNLYLDMNGII
Sbjct: 1 MGVPQFFAWLAQRYP-SIVTVLRE---------------TRPNPLGLEFDNLYLDMNGII 44
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ +P+P S ++ +IF YID +F ++RPR+L+++A+DGVAPRAKMNQQR RRF
Sbjct: 45 HPCCHPEDRPSPKSEAEMMLAIFTYIDRLFRVIRPRRLVFMAVDGVAPRAKMNQQRARRF 104
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSA----KEKPETCDSNVITPGTQFMAVLSAALQ 176
RAA++ EA R++ + +G LSA +++ DSN ITPGT+FM+ LSAALQ
Sbjct: 105 RAAQEGREA-------RQDLQASGDNLSAFRQRRKERMPFDSNCITPGTEFMSRLSAALQ 157
Query: 177 YFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDAD 236
+++ RL++ PGW +VI SDA+VPGEGEHKI+ +IR RN P +DPN RH LYG DAD
Sbjct: 158 HYVVLRLSEDPGWANLQVIFSDASVPGEGEHKILDFIRNARNGPNYDPNQRHVLYGADAD 217
Query: 237 LIMLSLATHEIHFSILRE 254
LI+L LATHE +LRE
Sbjct: 218 LILLGLATHEPAIYVLRE 235
>gi|260949235|ref|XP_002618914.1| hypothetical protein CLUG_00073 [Clavispora lusitaniae ATCC 42720]
gi|238846486|gb|EEQ35950.1| hypothetical protein CLUG_00073 [Clavispora lusitaniae ATCC 42720]
Length = 1430
Score = 276 bits (705), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 155/387 (40%), Positives = 228/387 (58%), Gaps = 48/387 (12%)
Query: 56 MNGIIHPCFHPDGKPAPTSYDD-VFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQ 114
MN I+H C H D DD ++ +IF+YIDH+F +++P+++ Y+AIDGVAPRAKMNQ
Sbjct: 1 MNSILHTCTHSDNDTLTRMTDDQMYAAIFNYIDHLFDIIKPKEVFYMAIDGVAPRAKMNQ 60
Query: 115 QRTRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAA 174
QR+RRFR A +A EE LRK + G+++ KE P DSN ITPGT+FMA L+
Sbjct: 61 QRSRRFRTAYEA------EENLRKAISQ-GEVI-PKEDP--FDSNAITPGTEFMAKLTNN 110
Query: 175 LQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLD 234
L+YFI ++ + W KVILS VPGEGEHKIM +IR ++ ++PN RHC+YGLD
Sbjct: 111 LKYFIHKKITEDNRWANIKVILSGHEVPGEGEHKIMQFIRSMKSQDDYNPNLRHCIYGLD 170
Query: 235 ADLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDD 294
ADLIML L TH+ HFS+LRE + K GD
Sbjct: 171 ADLIMLGLVTHDPHFSLLREEVV----------------FGPSSRNKSGD---------- 204
Query: 295 TPIHKKKYQFLNIWVLREYLQYEL-DIPNP-PFPINFERIVDDFVFLCFFVGNDFLPHMP 352
IH++ + L++ +LREY+ E D+ PF +FER++DDF+ + + +GNDFLP++P
Sbjct: 205 --IHEQNFYLLHLSLLREYMGLEFQDLEGELPFEYSFERVLDDFILIMYVIGNDFLPNLP 262
Query: 353 TLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQ 412
L I +GA L+ ++ M GYL + G++ R +++ ++ +E + F+K+
Sbjct: 263 DLHINKGAFPFLIGAFKESLKHMDGYLNEGGKINFKRFGTWLEYLSEFELENFEKQN--V 320
Query: 413 QAYEYNEAMKL-----NARRESSEELL 434
A +N+ ++L +RE S +LL
Sbjct: 321 DAEWFNKRLELISISGEKKRERSGKLL 347
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 104/271 (38%), Positives = 144/271 (53%), Gaps = 30/271 (11%)
Query: 416 EYNEAMKLNARRESSEELLQAPVAVADTVKLGEPGYKER-------YYADKFEISNPEEI 468
E+NE + +N R+ VA +T+K + Y E+ YY K S +E
Sbjct: 437 EFNERV-VNLRKTIKNYQSSNLVATEETMKEAKDLYDEKFVRAKDEYYKKKLHFSIHDEE 495
Query: 469 DKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDL----KDL---SDLEIT 521
+ + Y+EGL WV YYY+ SW W++ YHYAP SD+ KD+ + EI
Sbjct: 496 KMI--EFTRHYLEGLQWVLYYYYKGCASWNWYFRYHYAPRISDVAMGVKDMLEKNQDEIH 553
Query: 522 FFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQ 581
F L PF+PF+QLM LPA S +P+ YR+LMTD SPI FYP + +ID+NGK +W+
Sbjct: 554 FDLATPFKPFEQLMAVLPARSRKLMPDVYRSLMTDEHSPIIDFYPHEVEIDLNGKTASWE 613
Query: 582 GVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYV-HPQH--------PLYQQI 632
VV L F+DEK LL K +E LT E RNS D++++ +PQ+ P Y Q
Sbjct: 614 AVVLLSFVDEKRLLEALKPIEAKLTPAETKRNSYGQDVIFIRNPQNDNVYPTPLPGYFQD 673
Query: 633 TLYCQLYHQ---LPPQD-RFAWEIDVNASGG 659
+ Q Y + LPP D F +E+ A G
Sbjct: 674 LEHDQCYEEFFTLPPVDANFKFELPEGAKLG 704
>gi|149239226|ref|XP_001525489.1| 5'-3' exoribonuclease 1 [Lodderomyces elongisporus NRRL YB-4239]
gi|146450982|gb|EDK45238.1| 5'-3' exoribonuclease 1 [Lodderomyces elongisporus NRRL YB-4239]
Length = 1512
Score = 275 bits (703), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 144/346 (41%), Positives = 204/346 (58%), Gaps = 39/346 (11%)
Query: 56 MNGIIHPCFHP-DGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQ 114
MN I+H C H DG + S D ++ +IF+YIDH+F +++P++ Y+AIDGVAPRAKMNQ
Sbjct: 1 MNSILHTCTHSNDGSLSRLSDDQMYAAIFNYIDHLFSIIKPKQTFYMAIDGVAPRAKMNQ 60
Query: 115 QRTRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAA 174
QR RRFR A +A EE L+K E + KE P DSN ITPGT+FMA L+
Sbjct: 61 QRARRFRTAYEA------EENLKKAIENGEDI--PKEDP--FDSNSITPGTEFMAKLTDN 110
Query: 175 LQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLD 234
L+YFI ++ + W ++ILS VPGEGEHKIM YIR R P +DPN RHC+YGLD
Sbjct: 111 LKYFIHKKITEDSRWANVEIILSGHEVPGEGEHKIMEYIRAVRAQPEYDPNLRHCIYGLD 170
Query: 235 ADLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDD 294
ADLIML L +H+ HF++LRE +T P N
Sbjct: 171 ADLIMLGLVSHDPHFALLREEVTF--------------------------GPRRGNSSGP 204
Query: 295 TPIHKKKYQFLNIWVLREYLQYELD--IPNPPFPINFERIVDDFVFLCFFVGNDFLPHMP 352
+ ++K+ L++ VLREYL+ E F +FERI+DDF+ + + +GNDFLPH+P
Sbjct: 205 KDVTEQKFYLLHLSVLREYLELEFKEIEEQISFEFDFERILDDFILIMYVIGNDFLPHLP 264
Query: 353 TLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVA 398
L + +GA LL+ +++ GY+ + G++ L R+ ++ ++
Sbjct: 265 DLHLNKGAFPLLLSTFKQTLLQSDGYINEDGKINLKRLNIWVHHLS 310
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 77/180 (42%), Positives = 102/180 (56%), Gaps = 8/180 (4%)
Query: 450 GYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFA 509
+K YY +K S ++ D +K + YVEGL WV YYY+ SW ++Y YHYAP
Sbjct: 479 NWKNDYYKEKLHFSIDDKEDLLK--ITEHYVEGLQWVLYYYYRGCPSWNFYYRYHYAPRI 536
Query: 510 SDLK-DLSDL-----EITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYK 563
SD+ L L ++ F PF+PF+QLM LPA S +P YR LM D SPI +
Sbjct: 537 SDISLGLEALIEKGEDLKFEQSHPFKPFEQLMAVLPARSRKLMPAVYRPLMIDEKSPIIQ 596
Query: 564 FYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVH 623
FYP + +DMNGK W+ VV L F+DEK L+ K +E LT EE RNS + ++H
Sbjct: 597 FYPHEVDVDMNGKTATWEAVVLLDFVDEKKLIAALKPIEEKLTPEEKKRNSYGFPVKFIH 656
>gi|389582934|dbj|GAB65670.1| exoribonuclease [Plasmodium cynomolgi strain B]
Length = 1327
Score = 275 bits (702), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 171/476 (35%), Positives = 251/476 (52%), Gaps = 73/476 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGME------------ 48
MGVP FYRWL RYP I E D + AR + + NG +
Sbjct: 1 MGVPTFYRWLVTRYP-KIAKATYE--TRDSDVYARRTKIRDGHHNGEKKKDTYRVPDLSD 57
Query: 49 -----------------FDNLYLDMNGIIHPCFHPDGKPAPTSYDDVFKSIFDYIDHIFL 91
+DNLYLDMNGIIH C H D S +++F +IF YI+ +F
Sbjct: 58 YVNNTDENHCSDNINGYYDNLYLDMNGIIHLCSHSDNSRRAKSNEEIFLNIFLYIERLFD 117
Query: 92 LVRPRKLLYLAIDGVAPRAKMNQQRTRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKE 151
++ P+KLLY+AIDGVAP+AKMNQQR+RRF++ + LR++F + + E
Sbjct: 118 IIEPKKLLYMAIDGVAPKAKMNQQRSRRFKSILCSEIERNAYIELREKFLSENRTVP--E 175
Query: 152 KPETCDSNVITPGTQFMAVLSAALQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMS 211
+ DSN+ITPGTQFM LS AL+YF++ ++ W+ VI SDAN
Sbjct: 176 ELTFWDSNIITPGTQFMYELSVALKYFVEHKITNDEKWKNIVVIFSDAN----------- 224
Query: 212 YIRLQRNLPGFDPNTRHCLYGLDADLIMLSLATHEIHFSILREVITLPGQ-----QEKCF 266
R+ PG+DPNTRH ++G+DADLIMLSLA+HE +F ILRE+I L + Q K F
Sbjct: 225 -----RSQPGYDPNTRHVIHGMDADLIMLSLASHEPYFYILREIIILDSKGEEKVQNKDF 279
Query: 267 V-----------CGQVGHLAAECHGKPGD-NPADWNGVDDTPIHKKKY---QFLNIWVLR 311
V C + + K D + A+ N + I+ + + Q L++ +LR
Sbjct: 280 VGVLKSKQDLPLCTTHIRKTKKMYTKYNDPHYANINRSHNCMINSENWNELQILDLTILR 339
Query: 312 EYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHVYRRE 371
EYL + + N ER +DDF+F+CF GNDFLPH+P++ I G+I+ L+ +Y++
Sbjct: 340 EYLSKDFFFDS---TYNLERCIDDFIFICFLCGNDFLPHLPSISIAAGSIDQLVLLYQKV 396
Query: 372 FTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYEYNEAMKLNARR 427
+G YL + G++ L K++ +A E + F + ++ E + K + +R
Sbjct: 397 LPVLGDYLINEGKINLKPFSKYVSFIAEVERETFISQYDFKKKREKRDQQKDSLKR 452
Score = 159 bits (402), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 78/210 (37%), Positives = 126/210 (60%), Gaps = 2/210 (0%)
Query: 454 RYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLK 513
+YY KF + + +D K+VV KY+EGL WV YY+Q W W+YPY+YAP +SDL
Sbjct: 701 KYYKSKFHLDESDHVDDFVKEVVYKYIEGLSWVLLYYFQSCPMWHWYYPYYYAPLSSDLI 760
Query: 514 DLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDM 573
+ ++ F EP P +QL+ LP+ SS LP+ Y+ LM SPI FYP F+ +
Sbjct: 761 -IDNVNFIFHKDEPILPLEQLLCVLPSNSSHCLPKSYQELMVRYDSPIIDFYPKTFKEEE 819
Query: 574 NGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVHPQHPLYQQIT 633
NGK++ +Q V+ LPF+D++ +++ ++L LTEEE RN ++ +Y++ H L +QIT
Sbjct: 820 NGKKYKYQWVILLPFVDKERIIKHARELNDTLTEEERKRNRRGMNKIYMNCSHSLSKQIT 879
Query: 634 LYCQLY-HQLPPQDRFAWEIDVNASGGMNG 662
+ Y ++ + + D++++G +N
Sbjct: 880 KSIKAYVKKMKGEGEKKNDADMSSTGNLNA 909
>gi|328709686|ref|XP_003244039.1| PREDICTED: 5'-3' exoribonuclease 1-like [Acyrthosiphon pisum]
Length = 509
Score = 275 bits (702), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 155/372 (41%), Positives = 218/372 (58%), Gaps = 63/372 (16%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP F+R++++RYP + + +D Q+ EFDNLYLDMNGII
Sbjct: 1 MGVPKFFRYMSERYP--CLSELVKDYQIP------------------EFDNLYLDMNGII 40
Query: 61 HPCFHP--DGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C HP D + + + K+IF Y++ +F +++P+KL ++AIDGVAPRAKMNQQR R
Sbjct: 41 HNCSHPNDDDPHFRITEETIVKNIFHYLEVLFQMIQPQKLFFMAIDGVAPRAKMNQQRGR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RFR+A AAE KE G+ L ++E+ DSN ITPGT FM L + L+YF
Sbjct: 101 RFRSAHTAAEQT-------KEAISRGETLPSEER---FDSNCITPGTPFMVRLQSELEYF 150
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
+ +++ P W +VILS VPGEGEHKIM YIR ++ PG++P+TRHCLYGLDADLI
Sbjct: 151 VADKMSNDPLWTKVQVILSGHQVPGEGEHKIMDYIRYMKSRPGYNPHTRHCLYGLDADLI 210
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
ML L THE +FS+LRE + + +K +T +
Sbjct: 211 MLGLCTHEPYFSLLREEVKFGRKTKK-----------------------------ETSVD 241
Query: 299 KKKYQFLNIWVLREYLQYELD--IPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEI 356
+ ++ L++ ++R+YL E PF + E I+DD+V + F VGNDF+PH+P L I
Sbjct: 242 ETQFYLLHLSLMRDYLGLEFQELKETLPFEYDLESIIDDWVLMGFLVGNDFIPHLPDLHI 301
Query: 357 REGAINLLMHVY 368
+GA+ +L VY
Sbjct: 302 SKGALPILYRVY 313
>gi|301094845|ref|XP_002896526.1| 5'-3' exoribonuclease 1, putative [Phytophthora infestans T30-4]
gi|262109022|gb|EEY67074.1| 5'-3' exoribonuclease 1, putative [Phytophthora infestans T30-4]
Length = 1480
Score = 274 bits (701), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 152/414 (36%), Positives = 230/414 (55%), Gaps = 55/414 (13%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MG+P FYR++++RYPL + +P+ P EFD YLDMNGI+
Sbjct: 1 MGIPRFYRYMSERYPL----------------LNQPISDVSLLP---EFDAFYLDMNGIV 41
Query: 61 HPCFHPDGKP---APTSYDDVFKSIFDYIDHIFL-LVRPRKLLYLAIDGVAPRAKMNQQR 116
H C H D S + IF Y+D + +++P+KL+Y+AIDGVAPRAK+NQQR
Sbjct: 42 HNCTHSDAADDALNSLSLEGQLHGIFTYLDRLITHIIKPKKLVYIAIDGVAPRAKLNQQR 101
Query: 117 TRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQ 176
+RRFRA D +A +E ++ + ++ AK DSN ITPGT+F++ LS L
Sbjct: 102 SRRFRAGLDRQQAMDKERHMQIKLQDEKDGHKAKSVASKFDSNCITPGTEFLSKLSQHLV 161
Query: 177 YFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDAD 236
YF++ ++ P W +V S + VPGEGEHKI+ +IR ++ ++ N RHC+YG DAD
Sbjct: 162 YFVRQKMKSDPLWARLEVFFSGSEVPGEGEHKIVEFIRHRKMTDDYEANLRHCMYGSDAD 221
Query: 237 LIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTP 296
L++L L THE HF+++RE + +K V
Sbjct: 222 LMLLGLMTHEPHFTLVRETVVWGSHHKK---------------------------VAAKQ 254
Query: 297 IHKKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEI 356
I ++++Q +++ + REYL E+ + + P++ ER++DDF+ L F +GNDF+PH PTLEI
Sbjct: 255 IEEQQWQLVHLSLFREYLMMEMRVQS---PLDGERMLDDFILLTFLLGNDFIPHSPTLEI 311
Query: 357 REGAINLLMHVYRREF-TAMGGYLTDAGEVL-LDRVEKFIQSVAVYEDQIFQKR 408
E AI LL+ VYR T G YLT G++ + +++ + E++I R
Sbjct: 312 SEDAIPLLLKVYRELLETHQGSYLTLNGKITNVKLLQELFHVIGNQEEEILINR 365
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 79/174 (45%), Positives = 100/174 (57%), Gaps = 10/174 (5%)
Query: 452 KERYYADKFEI--SNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFA 509
K YYA K+ I N + +K + V Y+E L W YY+Q SW W+YPYHYAP
Sbjct: 459 KWNYYARKYGIQRGNGDAGNKDLEQVKKAYMEALVWCLAYYFQGPQSWAWYYPYHYAPMV 518
Query: 510 SDLKDLSDL--EITF----FLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYK 563
SDL D+ ++ + F + P PF+QLM LPA+SS+ +PE YR LM P SPI
Sbjct: 519 SDLTDIEEMIGNVKFDEDPSIAGPLLPFEQLMSNLPASSSNLVPESYRFLMVSPVSPIKH 578
Query: 564 FYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKL--EVFLTEEELFRNSV 615
FYP F IDM GKR AW+GV LPFID LL + + + LTE E RN +
Sbjct: 579 FYPETFAIDMEGKRNAWEGVNLLPFIDVALLKQAIAQFCPDSQLTEAERRRNKL 632
>gi|45187827|ref|NP_984050.1| ADL046Cp [Ashbya gossypii ATCC 10895]
gi|44982611|gb|AAS51874.1| ADL046Cp [Ashbya gossypii ATCC 10895]
gi|374107264|gb|AEY96172.1| FADL046Cp [Ashbya gossypii FDAG1]
Length = 1474
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 155/411 (37%), Positives = 233/411 (56%), Gaps = 64/411 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MG+P F+R++++R+P +I ++ DG ++ +FDNLYLDMN I+
Sbjct: 1 MGIPKFFRYVSERWP-NISQLI------DGTQIS-------------QFDNLYLDMNSIL 40
Query: 61 HPCFH--PDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H H D S ++VF IF YIDH+F ++P++ LY+AIDGVAPRAKMNQQR R
Sbjct: 41 HTATHGNEDDIKKRLSEEEVFARIFVYIDHLFHTIKPQQTLYMAIDGVAPRAKMNQQRAR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RFR+A DA E R R+ +E + E DSN ITPGT+FM L+ L+YF
Sbjct: 101 RFRSAMDA---ETSLNRARERGDEI-------PEGEPFDSNSITPGTEFMHKLTTNLKYF 150
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
I +++ WQ +ILS VPGEGEHKIM YIR R ++PNTRHC+YGLDADLI
Sbjct: 151 IHEKVSSDSLWQNKNIILSGHEVPGEGEHKIMQYIRTLRAQQDYNPNTRHCIYGLDADLI 210
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
ML L+ H+ H ++LRE I L G+ +K +
Sbjct: 211 MLGLSIHDTHVALLREEI-LYGRAQKP-----------------------------KALE 240
Query: 299 KKKYQFLNIWVLREYLQYEL-DIPNP-PFPINFERIVDDFVFLCFFVGNDFLPHMPTLEI 356
++ + L++ ++REYL+ E +I + F +FER++DDF+ + F +GNDFLP++P L +
Sbjct: 241 QQNFYLLHLAIMREYLELEFQEISDELEFKFDFERLLDDFILVMFVIGNDFLPNLPDLHL 300
Query: 357 REGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQK 407
+GA +L+ ++ + GY+ + G + R ++ ++ +E F++
Sbjct: 301 NKGAFPVLLQTFKETLKHLDGYINENGTINFARFSVWLDYLSKFELMNFER 351
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 83/176 (47%), Positives = 108/176 (61%), Gaps = 3/176 (1%)
Query: 451 YKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFAS 510
+K+ YY +K S +E DK+K ++ Y+EGL WV YYYQ SW W+Y YHYAP S
Sbjct: 510 WKDSYYKEKVGFSIHDE-DKLK-EMANNYIEGLQWVLYYYYQGCPSWSWYYRYHYAPRIS 567
Query: 511 DLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQ 570
D++ D+ I+F L +PF+PF QLM LPA S LP YR LM D SPI YP + +
Sbjct: 568 DIRKGLDVNISFSLDQPFKPFQQLMAVLPARSKELLPPVYRPLMYDDKSPILDLYPAEVE 627
Query: 571 IDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYV-HPQ 625
+D NGK W+ VVKL F+D+ LL L+ LT EE RN V DL++V +PQ
Sbjct: 628 LDKNGKTADWEAVVKLKFVDQDRLLAAMAPLDDLLTPEEKKRNIVGTDLIFVFNPQ 683
>gi|405120875|gb|AFR95645.1| exonuclease II Exo2 [Cryptococcus neoformans var. grubii H99]
Length = 1448
Score = 271 bits (693), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 148/364 (40%), Positives = 215/364 (59%), Gaps = 55/364 (15%)
Query: 54 LDMNGIIHPCFHPDGKPAPTSYDD---------VFKSIFDYIDHIFLLVRPRKLLYLAID 104
LDMNGIIH C HP P+S +D + +IF YIDH+F ++P+K+ ++AID
Sbjct: 23 LDMNGIIHNCSHP-----PSSENDPHFRITEEQMILAIFAYIDHLFTKIKPQKVFFMAID 77
Query: 105 GVAPRAKMNQQRTRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPG 164
GVAPRAKMNQQR+RRFRA KDA + R++ E+ G+ L ++ DSN ITPG
Sbjct: 78 GVAPRAKMNQQRSRRFRAGKDARDQ-------REKAEKNGEKLPDEK---AFDSNAITPG 127
Query: 165 TQFMAVLSAALQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDP 224
T FMA LS L+Y+++ R+++ W+ +VILS +VPGEGEHKI +IRL + P ++P
Sbjct: 128 TPFMARLSQHLKYYVRKRISEDADWRNIRVILSGHDVPGEGEHKIQEFIRLNKAQPDYNP 187
Query: 225 NTRHCLYGLDADLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGD 284
NTRHCLYGLDADLIML L +H+ HF +LRE +T G++ +
Sbjct: 188 NTRHCLYGLDADLIMLGLLSHDPHFCLLREEVTF-GRKSR-------------------- 226
Query: 285 NPADWNGVDDTPIHKKKYQFLNIWVLREYLQYELDI--PNPPFPINFERIVDDFVFLCFF 342
+T + + L++ ++REYL E F + ERI+DDF+ + F
Sbjct: 227 --------QNTELANTNFFLLHLSLMREYLDLEFSSLQTQISFEYDLERIIDDFILMAIF 278
Query: 343 VGNDFLPHMPTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYED 402
VGNDFLPH+P L I EGA+ + +Y+ + GY+ + G + L R++ + +A +E
Sbjct: 279 VGNDFLPHLPDLHINEGALERIWGMYKDILPTIDGYINEHGTISLPRLQLLLDKLAEFEV 338
Query: 403 QIFQ 406
+ F+
Sbjct: 339 KRFE 342
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 83/175 (47%), Positives = 115/175 (65%), Gaps = 7/175 (4%)
Query: 452 KERYYADKFEI--SNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFA 509
K +YY DK EI S+P ++ +D+V Y+EGL W+ YYY+ V SW WFY YHY+P
Sbjct: 512 KRQYYHDKLEINYSDPAQM----QDLVHHYIEGLQWILNYYYKGVSSWGWFYKYHYSPRI 567
Query: 510 SDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDF 569
+DLK +SD++ F G+PF PF QLMG LP S +P YR+LM + +SPI FYP +F
Sbjct: 568 TDLKGVSDMKFEFDYGKPFTPFQQLMGVLPVDSMDHVPLAYRDLMYEETSPIIDFYPRNF 627
Query: 570 QIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRN-SVMLDLLYVH 623
++DMNGK+ W+ VVK+PFID+ LL+ ++ LT EE RN S +L +V+
Sbjct: 628 ELDMNGKKQDWEAVVKIPFIDQNRLLKAMAARDIRLTPEERERNKSGVLSTQFVY 682
>gi|260944866|ref|XP_002616731.1| hypothetical protein CLUG_03972 [Clavispora lusitaniae ATCC 42720]
gi|238850380|gb|EEQ39844.1| hypothetical protein CLUG_03972 [Clavispora lusitaniae ATCC 42720]
Length = 327
Score = 271 bits (692), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 161/321 (50%), Positives = 210/321 (65%), Gaps = 22/321 (6%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEE--DPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNG 58
MGVPAF+RW++ +YP I VVE+ DPQ R S PNPNG E DNLYLDMNG
Sbjct: 1 MGVPAFFRWISRKYPKIISPVVEDVGDPQF-----GRVPQYSDPNPNG-ELDNLYLDMNG 54
Query: 59 IIHPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
I+HPC HP+ KPAP + D++F +F Y + + ++ RPRK+L +A+DGVAPRAKMNQQR R
Sbjct: 55 IVHPCSHPEHKPAPETEDEMFLDVFKYTERVLMMARPRKVLMIAVDGVAPRAKMNQQRAR 114
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLS-AKEKPETCDSNVITPGTQFMAVLSAALQY 177
RFRAA+DA A E+ER +EFE G+ + A + ++ D+N ITPGT FM L+ AL+Y
Sbjct: 115 RFRAAQDARAAAEEKERQIREFEARGQAIDDAIKGKKSWDTNAITPGTPFMDGLALALRY 174
Query: 178 FIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADL 237
++ +L PGW+ +VI+SDA VPGEGEHK+MS+IR QR P +D NTRHC+YGLDADL
Sbjct: 175 WVAHKLASDPGWRDLQVIVSDATVPGEGEHKLMSFIRSQRADPQYDANTRHCIYGLDADL 234
Query: 238 IMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPI 297
I L LATHE HF +LRE + G G + + + D D
Sbjct: 235 IFLGLATHEPHFRVLREDVFAQGN----------GRMRVADQLQITQDQRDAIAEQDA-- 282
Query: 298 HKKKYQFLNIWVLREYLQYEL 318
KK + +L++ VLREYL+ EL
Sbjct: 283 -KKPFLWLHVNVLREYLEVEL 302
>gi|189209730|ref|XP_001941197.1| 5'-3' exoribonuclease 2 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187977290|gb|EDU43916.1| 5'-3' exoribonuclease 2 [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 1391
Score = 270 bits (690), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 154/383 (40%), Positives = 219/383 (57%), Gaps = 49/383 (12%)
Query: 56 MNGIIHPCFHPDGKP--APTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMN 113
MNGIIH C H D A S D +F SIF+YI+H+F ++P++L ++AIDGVAPRAKMN
Sbjct: 1 MNGIIHNCTHNDSDSVTARKSEDQMFISIFNYIEHLFGKIKPKQLFFMAIDGVAPRAKMN 60
Query: 114 QQRTRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSA 173
QQR RRFR A D +A E+ +R+ E + E DSN ITPGT FMA L+
Sbjct: 61 QQRARRFRTALDTEKAR--EKAIREGVEMPTE--------EAFDSNCITPGTAFMAKLTQ 110
Query: 174 ALQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGL 233
L+YFI ++++ WQ +V+LS VPGEGEHK+M YIR + PG+DPN RHCLYGL
Sbjct: 111 QLKYFINKKVSEDIDWQGVEVVLSGHEVPGEGEHKVMEYIRQAKAQPGYDPNRRHCLYGL 170
Query: 234 DADLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVD 293
DADLIML L +H+ HFS+LRE +T G+Q +
Sbjct: 171 DADLIMLGLLSHDPHFSLLREEVTF-GRQSQT---------------------------K 202
Query: 294 DTPIHKKKYQFLNIWVLREYLQYELDIPNPP----FPINFERIVDDFVFLCFFVGNDFLP 349
+ + + +++ ++REYL+ E P FP + ER++DDF+ + FFVGNDFLP
Sbjct: 203 SKELEHQNFYLMHLCIVREYLELEFQELEEPGALSFPFDMERVIDDFILMAFFVGNDFLP 262
Query: 350 HMPTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRT 409
++P L I EGA+ L+ +VY+ GY+ + G + ++R+ + +A E + F+
Sbjct: 263 NLPHLHINEGALALMFNVYKTVLPKGKGYINEEGVINMERLAILLDELANIEYRHFESEN 322
Query: 410 R-----IQQAYEYNEAMKLNARR 427
++ + MK ARR
Sbjct: 323 SDAAWFKGKSLGKEDVMKKTARR 345
Score = 162 bits (409), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 84/178 (47%), Positives = 110/178 (61%), Gaps = 6/178 (3%)
Query: 450 GYKERYYADKFEI--SNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAP 507
+K YY KFE SN EE+ K+ ++ YV+GL WV YYY+ V SW W+Y YHY+P
Sbjct: 475 AWKNDYYKSKFEWDRSNEEELRKLTEN----YVQGLQWVLYYYYRGVASWPWYYQYHYSP 530
Query: 508 FASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPP 567
SD+K +I F LG+PF+PF QLMG LP S S +P+ Y LMT+ SPI FYP
Sbjct: 531 MISDVKRGLKADINFKLGQPFKPFQQLMGVLPDRSKSIVPKAYWPLMTNEDSPIIDFYPR 590
Query: 568 DFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVHPQ 625
DF +DMNGK+ W+ VVK+PFI E LL+ E LT +E RNS + L + + +
Sbjct: 591 DFTLDMNGKKQDWEAVVKIPFIQEDRLLKAMATKEQDLTPDEKARNSFGVSLKFTYAK 648
>gi|154295528|ref|XP_001548199.1| hypothetical protein BC1G_13389 [Botryotinia fuckeliana B05.10]
Length = 854
Score = 269 bits (687), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 152/349 (43%), Positives = 202/349 (57%), Gaps = 39/349 (11%)
Query: 82 IFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRFRAAKDAAEAEAEEERLRKEFE 141
IF Y D + +VRPRKLL +AIDGVAPRAKMNQQR+RRFR+A++A E ++ L K +
Sbjct: 4 IFKYTDRVVNMVRPRKLLMIAIDGVAPRAKMNQQRSRRFRSAQEAKEKAEDKAELLKMLK 63
Query: 142 EAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQARLNQIPGWQFTKVILSDANV 201
G + E + DSN ITPGT FM +L+ +L+Y+I +LN P W KVI+SD+ V
Sbjct: 64 SQGSHIEETEVKKAWDSNEITPGTPFMDILALSLRYWIAYKLNTDPAWAKMKVIISDSTV 123
Query: 202 PGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIMLSLATHEIHFSILRE-VITLPG 260
PGEGEHKIM ++R QR+ P +PNTRH +YGLDADLIML LATHE HF ILRE V G
Sbjct: 124 PGEGEHKIMEFVRSQRSSPDHNPNTRHVMYGLDADLIMLGLATHEPHFRILREDVFFNDG 183
Query: 261 QQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIHKKKYQFLNIWVLREYLQYELDI 320
+ C +CGQ GH A EC G +++ P K + +L++ VLREYL E+
Sbjct: 184 KPRTCKLCGQHGHEARECKGMYKIKDGEFDEKASAPT-LKPFIWLHVSVLREYLAAEI-- 240
Query: 321 PNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHVYRREFTAMGGYLT 380
LEIRE IN L+ ++R MGGYLT
Sbjct: 241 ---------------------------------LEIREDGINTLIAIWRDNIPYMGGYLT 267
Query: 381 DAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYEYNEAMKLNARRES 429
G V L+R + + +A ED IF+KR + ++ ++ + KLN R +
Sbjct: 268 KDGHVDLERAQFILDGLAKQEDAIFRKRRKNEENFQ--KKRKLNNERNA 314
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 106/224 (47%), Positives = 141/224 (62%), Gaps = 7/224 (3%)
Query: 442 DTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFY 501
DTV+L E GY +RYY KF +P++I+ + +V YVEGL WV YY+Q SW W+Y
Sbjct: 450 DTVRLWEDGYADRYYEQKFN-RDPKDIE-FRHEVGRAYVEGLAWVLLYYFQGCPSWDWYY 507
Query: 502 PYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPI 561
PYHYAPFA+D +L D++I F G FRPF+QLMG LPAAS A+PE++ +LMT+ S I
Sbjct: 508 PYHYAPFAADFANLKDMKIDFQKGRIFRPFEQLMGVLPAASRQAIPEQFHHLMTNEDSEI 567
Query: 562 YKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLY 621
FYP DF +D+NGK+FAWQGV LPFID + LL K+ L E+ RN + D+L
Sbjct: 568 IDFYPEDFVVDLNGKKFAWQGVALLPFIDSERLLDAMAKVYPTLPEDVSARNGLGRDVLL 627
Query: 622 V-HPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVNASGGMNGYI 664
V H LY +IT + Y + QD +++ S G+ G I
Sbjct: 628 VSEAHHDLYDEIT--SKFYSK--KQDAPHMKLNPKVSEGLTGRI 667
>gi|68467259|ref|XP_722291.1| hypothetical protein CaO19.12434 [Candida albicans SC5314]
gi|46444252|gb|EAL03528.1| hypothetical protein CaO19.12434 [Candida albicans SC5314]
Length = 1469
Score = 269 bits (687), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 149/355 (41%), Positives = 216/355 (60%), Gaps = 41/355 (11%)
Query: 56 MNGIIHPCFHP-DGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQ 114
MN I+H C H D S D ++ +IF+YI+H+F +++P+K Y+AIDGVAPRAKMNQ
Sbjct: 1 MNSILHTCTHSNDNTITRLSDDQMYAAIFNYIEHLFQIIKPQKTFYMAIDGVAPRAKMNQ 60
Query: 115 QRTRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAA 174
QR RRFR A +A E L+K E ++ KE P DSN ITPGT+FMA L+
Sbjct: 61 QRARRFRTAYEA------EINLKKAIENGEEI--PKEDP--FDSNSITPGTEFMANLTNN 110
Query: 175 LQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLD 234
L+YFI ++ + W ++ILS VPGEGEHKIM YIR R+ ++PN RHC+YGLD
Sbjct: 111 LKYFIHKKITEDSSWANIEIILSGHEVPGEGEHKIMEYIRSIRSQDDYNPNLRHCIYGLD 170
Query: 235 ADLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDD 294
ADLIML L TH+ HF++LRE +T Q+ +VG P D
Sbjct: 171 ADLIMLGLVTHDPHFALLREEVTFGPQR-------KVG-------------PKD------ 204
Query: 295 TPIHKKKYQFLNIWVLREYLQYEL-DIPNP-PFPINFERIVDDFVFLCFFVGNDFLPHMP 352
+H +K+ L++ +LREYL E +I N F +F+RI+DDF+ + + +GNDFLP++P
Sbjct: 205 --LHDQKFYLLHLSLLREYLSLEFQEIENQLNFEYDFDRILDDFILIMYVIGNDFLPNLP 262
Query: 353 TLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQK 407
L I +GA LL+ +++ GY+ + G++ L R+ +I+ ++ +E + F+K
Sbjct: 263 DLFINKGAFPLLIAAFKQTLLESDGYINENGKINLVRLNIYIKILSKFEFENFEK 317
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 81/184 (44%), Positives = 105/184 (57%), Gaps = 8/184 (4%)
Query: 450 GYKERYYADKFEIS-NPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPF 508
+K YY K S + EE ++ Y+EGL WV YYY+ SW W+Y YHYAP
Sbjct: 477 SWKNDYYQPKLHFSIDTEEGKGDLIEMTKHYIEGLQWVLYYYYRGCPSWNWYYRYHYAPR 536
Query: 509 ASDLK-DLSDL-----EITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIY 562
SD+ L +L ++ F L PF+PF+QLM LPA S +P YR LM+D SPI
Sbjct: 537 ISDISLGLEELINEKTDLKFELSHPFKPFEQLMAVLPARSKKLMPVVYRPLMSDEKSPII 596
Query: 563 KFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYV 622
FYP + IDMNGK +W+ VV L F+DEK L+ K +E LT EE RNS + ++
Sbjct: 597 NFYPHEVDIDMNGKTASWEAVVLLDFVDEKKLIEALKPIESKLTPEEKQRNSYGHAIKFI 656
Query: 623 H-PQ 625
H PQ
Sbjct: 657 HNPQ 660
>gi|322703736|gb|EFY95340.1| exonuclease Kem1 [Metarhizium anisopliae ARSEF 23]
Length = 1404
Score = 268 bits (686), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 143/355 (40%), Positives = 205/355 (57%), Gaps = 45/355 (12%)
Query: 54 LDMNGIIHPCFHPDGKPAPT---SYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRA 110
LDMNGIIH C H D + S +++F IF+YI+H+F ++P++L ++AIDGVAPRA
Sbjct: 19 LDMNGIIHNCTHKDAGEDVSFRLSEEEMFIRIFNYIEHLFGKIKPKQLFFMAIDGVAPRA 78
Query: 111 KMNQQRTRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAV 170
KMNQQR RRFR A DA +A E+A K K E DSN ITPGT+FMA
Sbjct: 79 KMNQQRARRFRTALDAEKAR----------EKAIKEGVEMPKEEPFDSNCITPGTEFMAK 128
Query: 171 LSAALQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCL 230
LS L+YF+ ++++ WQ +++LS VPGEGEHKIM YIR + P ++PN RHCL
Sbjct: 129 LSQQLRYFVNKKVSEDADWQGCEIVLSGHEVPGEGEHKIMEYIRNAKAQPNYNPNVRHCL 188
Query: 231 YGLDADLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWN 290
YGLDADLIML L +H+ HF +LRE +T G+ K
Sbjct: 189 YGLDADLIMLGLLSHDPHFCLLREEVTF-GRASKA------------------------- 222
Query: 291 GVDDTPIHKKKYQFLNIWVLREYLQYELDIPNP----PFPINFERIVDDFVFLCFFVGND 346
+ + + L++ ++REYL+ E + F + ER++DDF+ + FFVGND
Sbjct: 223 --KSKELEHQNFYLLHLCIVREYLEMEFQELHQEGTLSFSFDLERVIDDFILMAFFVGND 280
Query: 347 FLPHMPTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYE 401
FLP++P L I EGA+ + +Y+ GY+ + G + + R++K + ++ E
Sbjct: 281 FLPNLPGLHINEGALANMFKIYKAVLPTCDGYINENGVINMARLDKLLTELSKLE 335
Score = 169 bits (428), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 78/174 (44%), Positives = 112/174 (64%)
Query: 450 GYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFA 509
G+K +YY KF PE+ +K + D+ YV+GL WV YYY+ + SW WFY YHYAP
Sbjct: 498 GWKTKYYLQKFPEWAPEKYEKEQIDLCQNYVQGLQWVLFYYYKGIASWPWFYGYHYAPLI 557
Query: 510 SDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDF 569
SD+ + +++F G+PF+P++QLMG LP S +P+ Y +LMT+P+SPI FYP DF
Sbjct: 558 SDVAKGLNADLSFKKGQPFKPYEQLMGVLPDRSKKIVPKVYHDLMTNPNSPIIDFYPRDF 617
Query: 570 QIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVH 623
++DMNGK+ W+ VVK+PFIDEK LL L ++E RN + + + +
Sbjct: 618 ELDMNGKKMEWEAVVKIPFIDEKRLLDAMAPKNDLLEDDEKSRNGFGVPIKFTY 671
>gi|401883118|gb|EJT47352.1| hypothetical protein A1Q1_03823 [Trichosporon asahii var. asahii
CBS 2479]
Length = 1499
Score = 268 bits (685), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 150/350 (42%), Positives = 205/350 (58%), Gaps = 49/350 (14%)
Query: 81 SIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRFRAAKDAAEAEAEEERLRKEF 140
+IF YID +F ++PRK+ ++AIDGVAPRAKMNQQR+RRFR A+DA E EE LRK
Sbjct: 4 AIFAYIDFLFTKIKPRKVFFMAIDGVAPRAKMNQQRSRRFRTARDAREKR--EEALRK-- 59
Query: 141 EEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQARLNQIPGWQFTKVILSDAN 200
G+ L ++ DSN ITPGT FMA LS L+Y+++ R+++ W+ KVILS
Sbjct: 60 ---GETLPEEK---AFDSNCITPGTPFMARLSEHLKYYVRKRISEDAEWRGVKVILSGHE 113
Query: 201 VPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIMLSLATHEIHFSILREVITLPG 260
VPGEGEHKIM +IR + PG++PNTRHCLYGLDADL+ML L +H+ HFS+LRE +T G
Sbjct: 114 VPGEGEHKIMDFIRKTKAQPGYNPNTRHCLYGLDADLVMLGLISHDPHFSLLREEVTF-G 172
Query: 261 QQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIHKKKYQFLNIWVLREYLQYELD- 319
++ K V + L++ +LREYL E
Sbjct: 173 RKAKKNVS----------------------------LANSNMFLLHLSLLREYLDMEFQS 204
Query: 320 -IPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHVYRREFTAMGGY 378
+ F + ERI+DD++ + FFVGNDFLPH+P L I EGA+ + +Y+ GGY
Sbjct: 205 VAESISFEYDLERIIDDWILMGFFVGNDFLPHLPGLHINEGALETIWKIYKEILPQAGGY 264
Query: 379 LTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYEYNEAMKLNARRE 428
L D G + L R++ + ++ YE Q F++ EY +A RE
Sbjct: 265 LNDKGTISLPRLQLLLDKLSEYEKQRFEE--------EYMDANWFKGSRE 306
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 74/141 (52%), Positives = 96/141 (68%)
Query: 475 VVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQL 534
+V +Y+EGL W+ YYY+ V +W WFY YHYAP SDLKD++ + F +G+PF PF QL
Sbjct: 493 IVYRYIEGLQWILYYYYKGVPAWGWFYNYHYAPMISDLKDIASFKFDFDIGKPFLPFQQL 552
Query: 535 MGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLL 594
MG LPA S +P+ YR+LM + +SPI FYP F +DMNGK+ W+ VVK+PFI+E L
Sbjct: 553 MGVLPADSQEHVPQAYRDLMYEDTSPIIDFYPKIFDLDMNGKKQDWEAVVKIPFINEDRL 612
Query: 595 LRQTKKLEVFLTEEELFRNSV 615
LR + E LT EE RN V
Sbjct: 613 LRTMAQREQRLTPEEKGRNRV 633
>gi|406702486|gb|EKD05502.1| hypothetical protein A1Q2_00263 [Trichosporon asahii var. asahii
CBS 8904]
Length = 1568
Score = 268 bits (684), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 150/350 (42%), Positives = 205/350 (58%), Gaps = 49/350 (14%)
Query: 81 SIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRFRAAKDAAEAEAEEERLRKEF 140
+IF YID +F ++PRK+ ++AIDGVAPRAKMNQQR+RRFR A+DA E EE LRK
Sbjct: 4 AIFAYIDFLFTKIKPRKVFFMAIDGVAPRAKMNQQRSRRFRTARDAREKR--EEALRK-- 59
Query: 141 EEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQARLNQIPGWQFTKVILSDAN 200
G+ L ++ DSN ITPGT FMA LS L+Y+++ R+++ W+ KVILS
Sbjct: 60 ---GETLPEEK---AFDSNCITPGTPFMARLSEHLKYYVRKRISEDAEWRGVKVILSGHE 113
Query: 201 VPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIMLSLATHEIHFSILREVITLPG 260
VPGEGEHKIM +IR + PG++PNTRHCLYGLDADL+ML L +H+ HFS+LRE +T G
Sbjct: 114 VPGEGEHKIMDFIRKTKAQPGYNPNTRHCLYGLDADLVMLGLISHDPHFSLLREEVTF-G 172
Query: 261 QQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIHKKKYQFLNIWVLREYLQYELD- 319
++ K V + L++ +LREYL E
Sbjct: 173 RKAKKNVS----------------------------LANSNMFLLHLSLLREYLDMEFQS 204
Query: 320 -IPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHVYRREFTAMGGY 378
+ F + ERI+DD++ + FFVGNDFLPH+P L I EGA+ + +Y+ GGY
Sbjct: 205 VAESISFEYDLERIIDDWILMGFFVGNDFLPHLPGLHINEGALETIWKIYKEILPQAGGY 264
Query: 379 LTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYEYNEAMKLNARRE 428
L D G + L R++ + ++ YE Q F++ EY +A RE
Sbjct: 265 LNDKGTISLPRLQLLLDKLSEYEKQRFEE--------EYMDANWFKGSRE 306
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 74/141 (52%), Positives = 96/141 (68%)
Query: 475 VVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQL 534
+V +Y+EGL W+ YYY+ V +W WFY YHYAP SDLKD++ + F +G+PF PF QL
Sbjct: 493 IVYRYIEGLQWILYYYYKGVPAWGWFYNYHYAPMISDLKDIASFKFDFDIGKPFLPFQQL 552
Query: 535 MGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLL 594
MG LPA S +P+ YR+LM + +SPI FYP F +DMNGK+ W+ VVK+PFI+E L
Sbjct: 553 MGVLPADSQEHVPQAYRDLMYEDTSPIIDFYPKIFDLDMNGKKQDWEAVVKIPFINEDRL 612
Query: 595 LRQTKKLEVFLTEEELFRNSV 615
LR + E LT EE RN V
Sbjct: 613 LRTMAQREQRLTPEEKGRNRV 633
>gi|320169903|gb|EFW46802.1| 5'-3' exoribonuclease 2 [Capsaspora owczarzaki ATCC 30864]
Length = 1548
Score = 268 bits (684), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 162/448 (36%), Positives = 223/448 (49%), Gaps = 89/448 (19%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGV R L +RYPL + + P+ + FDNLYLD NGI
Sbjct: 1 MGVIRLTRALVERYPLILRTI-------------------GPSNDAPLFDNLYLDFNGIA 41
Query: 61 HPCFHP--DGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H H D A S ++ ++F ID + + RP+KL+Y+AIDGVAPRAKMNQQR R
Sbjct: 42 HNASHGKDDAGAAAISELEMMSAMFAAIDRLVEVARPQKLVYIAIDGVAPRAKMNQQRQR 101
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPET--------CDSNVITPGTQFMAV 170
R + A+ A E+ R E G L AK E D+N ITPGT+FM
Sbjct: 102 RLKTARAA-------EKARTEASAIGDLTGAKPIEEIEAEARALPFDANCITPGTEFMDR 154
Query: 171 LSAALQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCL 230
+ A L Y+I+ ++ + P W +VILS PGEGEHKI+ +IR Q++ PG++PNTRHC+
Sbjct: 155 MEAYLSYYIKRKITESPQWSSLQVILSGHRTPGEGEHKIVDWIRAQKSQPGYNPNTRHCM 214
Query: 231 YGLDADLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWN 290
YGLDADLIMLSLA HE HF+ILRE + ++ A + + +
Sbjct: 215 YGLDADLIMLSLAMHEPHFAILREKVLFRSKK-------------ASVNAADARSEVAFQ 261
Query: 291 GVDDTPIHKKKYQFLNIWVLREYLQYELDI-------------------------PNPPF 325
D+ Q L I +LREYL E + P
Sbjct: 262 ATDE-------LQLLYIGLLREYLDMEFGLSAGFKRSDGLRHGPLEKLMEQQQKAATPAL 314
Query: 326 PI------NFERIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHVYRREFTAMGGYL 379
N ER +DDF+FLCF +GNDFLPHMP +I G ++ YR+ ++ YL
Sbjct: 315 TSQSVSAWNLERTIDDFIFLCFIIGNDFLPHMPGFDIDSGGLDFAFEAYRQVRNSLNDYL 374
Query: 380 TDAGEVLLDR--VEKFIQSVAVYEDQIF 405
+A V+++ +E+ ++ E Q+F
Sbjct: 375 VNASTVVVNIAFLEQLFAHLSRRERQLF 402
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 71/182 (39%), Positives = 101/182 (55%), Gaps = 13/182 (7%)
Query: 448 EPGYKERYYADKFE--ISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHY 505
E YK YYA F+ +SN + K+ K Y+EGL WV YY Q + SW W++PYH+
Sbjct: 684 EASYKSSYYATYFDDVVSNTPSLRKLIK----HYLEGLVWVLHYYTQGLASWSWYFPYHF 739
Query: 506 APFASDLKDLSDL--EITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYK 563
APFASD+ +L +L +I F P P++QL+ LP AS+ LP R LMT + +
Sbjct: 740 APFASDMVNLGELYGQIHFPADSPLNPYEQLLAVLPLASAQFLPAPLRPLMT---GALAE 796
Query: 564 FYPPDFQIDMNGKRFAWQGVVKLPFID-EKLLLR-QTKKLEVFLTEEELFRNSVMLDLLY 621
FY D ++ + K ++ V+ +PFID E+L +T LT EE R S+ L+
Sbjct: 797 FYRTDHRVIPDEKGREYKDVLLIPFIDIERLRAEVRTALASGSLTAEERTRGSLGQAQLF 856
Query: 622 VH 623
VH
Sbjct: 857 VH 858
>gi|395510147|ref|XP_003759342.1| PREDICTED: 5'-3' exoribonuclease 2-like, partial [Sarcophilus
harrisii]
Length = 273
Score = 268 bits (684), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 133/264 (50%), Positives = 180/264 (68%), Gaps = 2/264 (0%)
Query: 146 LLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQARLNQIPGWQFTKVILSDANVPGEG 205
L +E E DSN ITPGT+FM L+ L+Y+I RLN PGW+ VILSDA+ PGEG
Sbjct: 2 FLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIADRLNNDPGWKNLTVILSDASAPGEG 61
Query: 206 EHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIMLSLATHEIHFSILREVITLPGQQEKC 265
EHKIM YIR QR P DPNT HCL G DADLIML LATHE +F+I+RE P + + C
Sbjct: 62 EHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLGLATHEPNFTIIREEFK-PNKPKPC 120
Query: 266 FVCGQVGHLAAECHGKPGDNPADWNGVDDT-PIHKKKYQFLNIWVLREYLQYELDIPNPP 324
+C Q+GH +C G P + + + +++ P + ++ ++ + VLREYL+ EL + + P
Sbjct: 121 GLCNQLGHEVKDCQGLPREKQGEHDQFEESLPASEGEFIYIRLNVLREYLERELTMASLP 180
Query: 325 FPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHVYRREFTAMGGYLTDAGE 384
F + ER +DD+VF+CFFVGNDFLPH+P+LEIREGAI+ L+++Y+ GGYLT++G
Sbjct: 181 FTFDIERSIDDWVFMCFFVGNDFLPHLPSLEIREGAIDRLVNIYKNVVHKTGGYLTESGY 240
Query: 385 VLLDRVEKFIQSVAVYEDQIFQKR 408
V L RV+ + +V ED IF+KR
Sbjct: 241 VNLQRVQMIMLAVGEVEDSIFKKR 264
>gi|164424738|ref|XP_960925.2| hypothetical protein NCU06678 [Neurospora crassa OR74A]
gi|157070639|gb|EAA31689.2| hypothetical protein NCU06678 [Neurospora crassa OR74A]
Length = 1415
Score = 268 bits (684), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 154/383 (40%), Positives = 218/383 (56%), Gaps = 49/383 (12%)
Query: 56 MNGIIHPCFHPDGKPAP--TSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMN 113
MNGIIH C H D + +++F +IF+YI+H+F ++P+KL ++AIDGVAPRAKMN
Sbjct: 1 MNGIIHNCTHKDTSDVQFRMTEEEMFIAIFNYIEHLFGKIKPKKLFFMAIDGVAPRAKMN 60
Query: 114 QQRTRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSA 173
QQR RRFR A D +A + R KE K E DSN ITPGT+FMA LS
Sbjct: 61 QQRARRFRTALDNEKARDKAIREGKELP----------KEEPFDSNCITPGTEFMAKLSQ 110
Query: 174 ALQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGL 233
L+YFI ++++ WQ +++LS VPGEGEHKIM YIR R +D N RHCLYGL
Sbjct: 111 QLRYFIHKKVSEDRDWQQPEIVLSGHEVPGEGEHKIMEYIRNARAQLDYDANVRHCLYGL 170
Query: 234 DADLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVD 293
DADLIML L +H+ HF +LRE +T F G H A
Sbjct: 171 DADLIMLGLLSHDPHFCLLREEVT--------FGRGPSKHKA------------------ 204
Query: 294 DTPIHKKKYQFLNIWVLREYLQYEL-DIPNP---PFPINFERIVDDFVFLCFFVGNDFLP 349
+ ++ + +++ ++REYL+ E D+ P FP + E+++DDF+ + FFVGNDFLP
Sbjct: 205 -KGLEEQNFYLMHLCIVREYLELEFQDLKKPGAMSFPFDMEKVIDDFILMAFFVGNDFLP 263
Query: 350 HMPTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIF---- 405
++P L I EGA++L+ +Y+ GY+ + G+V L R+ ++ + E + F
Sbjct: 264 NLPRLHINEGALSLMFRIYKEILPRGDGYINEGGKVNLQRLGLLLEELGKEEYRFFEHEH 323
Query: 406 --QKRTRIQQAYEYNEAMKLNAR 426
Q R ++ E NEA A+
Sbjct: 324 EDQSWLRAKKMLEDNEAETAKAK 346
Score = 168 bits (425), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 78/173 (45%), Positives = 110/173 (63%)
Query: 451 YKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFAS 510
+K++YYA+KFE PE + + + YV+GL WV YYY+ + SW WFY YHYAP S
Sbjct: 470 WKDKYYAEKFEDWTPENKEDELRKLTENYVQGLQWVLYYYYRGIASWPWFYRYHYAPLIS 529
Query: 511 DLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQ 570
D+ ++ F +G+PF+P++QLMG LP S +P Y +LMT+P+SPI FYP DF+
Sbjct: 530 DVMKGLKADLNFKMGQPFKPYEQLMGVLPDRSKKIVPTAYWDLMTNPNSPIIDFYPRDFE 589
Query: 571 IDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVH 623
+DMNGK+ W+ VVK+PFIDEK LL L++ E RN + L + +
Sbjct: 590 LDMNGKKMDWEAVVKIPFIDEKRLLAAMGPKNELLSDVEKSRNDFGVALKFTY 642
>gi|322696208|gb|EFY88004.1| exonuclease [Metarhizium acridum CQMa 102]
Length = 1386
Score = 267 bits (683), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 142/353 (40%), Positives = 204/353 (57%), Gaps = 45/353 (12%)
Query: 56 MNGIIHPCFHPDGKPAPT---SYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKM 112
MNGIIH C H D + S +++F IF+YI+H+F ++P++L ++AIDGVAPRAKM
Sbjct: 1 MNGIIHNCTHKDAGEDVSFRLSEEEMFIRIFNYIEHLFGKIKPKQLFFMAIDGVAPRAKM 60
Query: 113 NQQRTRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLS 172
NQQR RRFR A DA +A E+A K K E DSN ITPGT+FMA LS
Sbjct: 61 NQQRARRFRTALDAEKAR----------EKAIKEGVEMPKEEPFDSNCITPGTEFMAKLS 110
Query: 173 AALQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYG 232
L+YF+ ++++ WQ +++LS VPGEGEHKIM YIR + P ++PN RHCLYG
Sbjct: 111 QQLRYFVNKKVSEDADWQGCEIVLSGHEVPGEGEHKIMEYIRNAKAQPNYNPNVRHCLYG 170
Query: 233 LDADLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGV 292
LDADLIML L +H+ HF +LRE +T G+ K
Sbjct: 171 LDADLIMLGLLSHDPHFCLLREEVTF-GRASK---------------------------T 202
Query: 293 DDTPIHKKKYQFLNIWVLREYLQYELDIPNP----PFPINFERIVDDFVFLCFFVGNDFL 348
+ + + L++ ++REYL+ E + FP + ER++DDF+ + FFVGNDFL
Sbjct: 203 KSKELEHQNFYLLHLCIVREYLEMEFQELHQEGTLSFPFDLERVIDDFILMAFFVGNDFL 262
Query: 349 PHMPTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYE 401
P++P L I EGA+ + +Y+ GY+ + G + + R++K + ++ E
Sbjct: 263 PNLPGLHINEGALANMFKIYKAVLPTCDGYINENGVINMARLDKLLTELSKLE 315
Score = 168 bits (425), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 77/174 (44%), Positives = 112/174 (64%)
Query: 450 GYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFA 509
G+K +YY KF +PE+ +K + D+ YV+GL WV YYY+ + SW WFY YHYAP
Sbjct: 478 GWKTKYYLQKFPEWDPEKYEKEQIDLCQNYVQGLQWVLFYYYKGIASWPWFYGYHYAPLI 537
Query: 510 SDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDF 569
SD+ + ++ F G+PF+P++QLMG LP S +P+ Y +LMT+P+SPI FYP DF
Sbjct: 538 SDVAKGLNADLNFKKGQPFKPYEQLMGVLPDRSKKIVPKVYHDLMTNPNSPIIDFYPRDF 597
Query: 570 QIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVH 623
++DMNGK+ W+ VVK+PFI+EK LL L ++E RN + + + +
Sbjct: 598 ELDMNGKKMDWEAVVKIPFIEEKRLLDAMATKNDLLEDDEKSRNGFGVPIKFTY 651
>gi|255072731|ref|XP_002500040.1| predicted protein [Micromonas sp. RCC299]
gi|226515302|gb|ACO61298.1| predicted protein [Micromonas sp. RCC299]
Length = 249
Score = 267 bits (682), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 133/201 (66%), Positives = 164/201 (81%)
Query: 56 MNGIIHPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQ 115
MNGIIHPCFHP+ +PAPT+ ++VF+ IFDYID +F ++RPRKLLY+AIDGVAPRAKMNQQ
Sbjct: 1 MNGIIHPCFHPEDRPAPTTEEEVFECIFDYIDRLFAMIRPRKLLYMAIDGVAPRAKMNQQ 60
Query: 116 RTRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAAL 175
R+RRFRAA++A E E E+E+LR++ G + ++K E DSNVITPGT FM LSAAL
Sbjct: 61 RSRRFRAAQEAKEKEEEDEKLREKLRREGVNVPPRQKSEAFDSNVITPGTPFMGRLSAAL 120
Query: 176 QYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDA 235
QY++ R+N P W+ KVI+SDA+VPGEGEHK M YIR QR L GFDPNT+H +YGLDA
Sbjct: 121 QYYVHQRMNTDPAWRGVKVIMSDASVPGEGEHKAMHYIRQQRGLKGFDPNTKHVVYGLDA 180
Query: 236 DLIMLSLATHEIHFSILREVI 256
DLIML+LATHE +F ILREV+
Sbjct: 181 DLIMLALATHEPNFWILREVV 201
>gi|342878482|gb|EGU79819.1| hypothetical protein FOXB_09678 [Fusarium oxysporum Fo5176]
Length = 1380
Score = 267 bits (682), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 143/358 (39%), Positives = 211/358 (58%), Gaps = 45/358 (12%)
Query: 56 MNGIIHPCFHPDGKPAPT---SYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKM 112
MNGIIH C H D + S +++F IF+YI+H+F ++P++L ++AIDGVAPRAKM
Sbjct: 1 MNGIIHNCTHKDAGEDVSFRLSEEEMFIRIFNYIEHLFGKIKPKQLFFMAIDGVAPRAKM 60
Query: 113 NQQRTRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLS 172
NQQR+RRFR A DA +A E+ KE E KE+P DSN ITPGT+FMA LS
Sbjct: 61 NQQRSRRFRTALDAEKAR---EKAIKEGVEI-----PKEEP--FDSNCITPGTEFMAKLS 110
Query: 173 AALQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYG 232
L+YF+ ++++ WQ +++LS VPGEGEHKIM YIR + P ++ N RHCLYG
Sbjct: 111 QQLRYFVNKKVSEDTDWQGCEIVLSGHEVPGEGEHKIMEYIRNAKAQPNYNQNVRHCLYG 170
Query: 233 LDADLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGV 292
LDADLIML L +H+ HF +LRE +T G+ K
Sbjct: 171 LDADLIMLGLLSHDPHFCLLREEVTF-GRASK---------------------------T 202
Query: 293 DDTPIHKKKYQFLNIWVLREYLQYEL----DIPNPPFPINFERIVDDFVFLCFFVGNDFL 348
+ + + L++ ++REYL+ E + FP + ER++DDF+ + FFVGNDFL
Sbjct: 203 KSKELEHQNFYLLHLCIVREYLEMEFQELQEDGALSFPFDLERVIDDFILMAFFVGNDFL 262
Query: 349 PHMPTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQ 406
P++P+L I EGA+ + +Y+ GY+ + G + ++R+++ + ++ E F+
Sbjct: 263 PNLPSLHINEGALAKMFRIYKSILPKCDGYMNENGVINMERLQRLLGELSKTEIDAFE 320
Score = 165 bits (417), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 79/174 (45%), Positives = 105/174 (60%)
Query: 450 GYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFA 509
G+K +YY KFE P+ DK + YV+GL WV YYYQ + SW WFY YHYAP
Sbjct: 479 GWKTKYYLQKFEEWAPDNYDKELTALCENYVQGLQWVLYYYYQGIASWPWFYGYHYAPLI 538
Query: 510 SDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDF 569
SD+ ++ F G+PF P++QLMG LP S +P+ Y +LMT+P SPI FYP DF
Sbjct: 539 SDVVKGVGADLNFKKGQPFLPYEQLMGVLPDRSKKIVPKVYHDLMTNPDSPIIDFYPRDF 598
Query: 570 QIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVH 623
++DMNGK+ W+ V+K+PFIDEK LL L +E RN + L + +
Sbjct: 599 ELDMNGKKMDWEAVIKIPFIDEKRLLAAMAPKNELLEPDEKARNGFGVPLKFTY 652
>gi|241950323|ref|XP_002417884.1| 5'-3' exoribonuclease, DNA strand transfer protein beta, putative
[Candida dubliniensis CD36]
gi|223641222|emb|CAX45602.1| 5'-3' exoribonuclease, DNA strand transfer protein beta, putative
[Candida dubliniensis CD36]
Length = 1487
Score = 266 bits (680), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 147/355 (41%), Positives = 214/355 (60%), Gaps = 41/355 (11%)
Query: 56 MNGIIHPCFHP-DGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQ 114
MN I+H C H D S D ++ +IF+YI+H+F +++P+K Y+AIDGVAPRAKMNQ
Sbjct: 1 MNSILHTCTHSNDNTITRLSDDQMYAAIFNYIEHLFQIIKPQKTFYMAIDGVAPRAKMNQ 60
Query: 115 QRTRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAA 174
QR RRFR A +A E L+K E ++ KE P DSN ITPGT+FMA L+
Sbjct: 61 QRARRFRTAYEA------EINLKKAIENGEEI--PKEDP--FDSNSITPGTEFMAKLTNN 110
Query: 175 LQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLD 234
L+YFI ++ + W +++LS VPGEGEHKIM YIR R+ ++PN RHC+YGLD
Sbjct: 111 LKYFIHKKITEDSSWANIEIVLSGHEVPGEGEHKIMEYIRSIRSQDDYNPNLRHCIYGLD 170
Query: 235 ADLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDD 294
ADLIML L TH+ HF++LRE +T G Q K P D
Sbjct: 171 ADLIMLGLVTHDPHFALLREEVTF-GPQRKI-------------------GPKD------ 204
Query: 295 TPIHKKKYQFLNIWVLREYLQYEL-DIPNP-PFPINFERIVDDFVFLCFFVGNDFLPHMP 352
+H +K+ L++ +LREYL E +I N F +F++I+DDF+ + + +GNDFLP++P
Sbjct: 205 --LHDQKFYLLHLSLLREYLSLEFQEIENQLNFEYDFDKILDDFILIMYVIGNDFLPNLP 262
Query: 353 TLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQK 407
L I +GA LL+ +++ GY+ + G++ L R+ +I+ ++ +E + F+K
Sbjct: 263 DLFINKGAFPLLIAAFKQTLLDSDGYINENGKINLVRLNIYIKFLSKFEFENFEK 317
Score = 148 bits (374), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 84/184 (45%), Positives = 108/184 (58%), Gaps = 8/184 (4%)
Query: 450 GYKERYYADKFEISNPEEIDKVKK-DVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPF 508
+K YY K S E K K ++ Y+EGL WV YYY+ SW W+Y YHYAP
Sbjct: 477 SWKNDYYQSKLHFSIDTEEGKNKLIELTKHYIEGLQWVLYYYYRGCPSWNWYYKYHYAPR 536
Query: 509 ASD----LKDLSD--LEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIY 562
SD L++L + +E+ F L PF+PF+QLM LPA S +P YR LMTD SPI
Sbjct: 537 ISDISLGLEELINEKIELNFELSHPFKPFEQLMAVLPARSKKLMPVVYRPLMTDEKSPII 596
Query: 563 KFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYV 622
FYP + +IDMNGK +W+ VV L F+DEK L+ K +E LT EE RNS + ++
Sbjct: 597 NFYPHEVEIDMNGKTASWEAVVLLDFVDEKKLIEALKPIESKLTFEEKQRNSYGHAIKFI 656
Query: 623 H-PQ 625
H PQ
Sbjct: 657 HNPQ 660
>gi|190345127|gb|EDK36952.2| hypothetical protein PGUG_01050 [Meyerozyma guilliermondii ATCC
6260]
Length = 1378
Score = 266 bits (680), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 140/355 (39%), Positives = 210/355 (59%), Gaps = 41/355 (11%)
Query: 56 MNGIIHPCFHPDGKPAPTSYDD-VFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQ 114
MN I+H C H + DD ++ +IF YI+H+F +++P+ + Y+AIDGVAPRAKMNQ
Sbjct: 1 MNSILHTCTHSNDDTLSRMTDDQMYAAIFSYIEHLFEIIKPKGVFYMAIDGVAPRAKMNQ 60
Query: 115 QRTRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAA 174
QR RRFR A +A EE L+K + ++ K + DSN ITPGT+FMA L+
Sbjct: 61 QRARRFRTAYEA------EENLKKAISQGLEI----PKDDPFDSNAITPGTEFMAKLTEN 110
Query: 175 LQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLD 234
L+YFI +++ W T +ILS VPGEGEHKIM+YIR ++ P ++ N+RHC+YGLD
Sbjct: 111 LKYFIHKKISTDSRWAETVIILSGHEVPGEGEHKIMNYIRTMKSQPNYNSNSRHCIYGLD 170
Query: 235 ADLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDD 294
ADLIML L +H+ HF +LRE +T P N +D
Sbjct: 171 ADLIMLGLVSHDPHFCLLREEVTF--------------------------GPRSGNKSND 204
Query: 295 TPIHKKKYQFLNIWVLREYLQYEL-DIPNP-PFPINFERIVDDFVFLCFFVGNDFLPHMP 352
+H +K+ L+I +LREY+ E D+ N F +FER++DD + + + +GNDFLP +P
Sbjct: 205 --LHDQKFFLLHISLLREYISLEFQDMDNDVSFEFDFERVLDDLILIMYVIGNDFLPSLP 262
Query: 353 TLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQK 407
L I +GA LL+ +++ GY+ + G + L R+ +++ ++ +E + F+K
Sbjct: 263 DLYINKGAFPLLLETFKQALAESDGYINENGTINLKRLAIWLRHLSEFELENFEK 317
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 85/182 (46%), Positives = 116/182 (63%), Gaps = 9/182 (4%)
Query: 451 YKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFAS 510
+K++YY +KF+ S ++ + V ++ Y+EGL WV YYYQ SW W+Y YHYAP S
Sbjct: 478 WKDQYYQEKFKFSIHDKEEMV--NLTEHYIEGLQWVLYYYYQGCPSWSWYYRYHYAPRIS 535
Query: 511 D----LKDL--SDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKF 564
D L+++ ++ +ITF LG PF+PF+QLM LPA S +P +YR LMT+ SPI F
Sbjct: 536 DISIGLENMLENNKKITFELGTPFKPFEQLMAVLPARSRKLMPLEYRPLMTESHSPIIDF 595
Query: 565 YPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVH- 623
YP IDMNGK +W+ VV L F+DEK L+ K +E LT EE RNS D+ ++H
Sbjct: 596 YPDKVDIDMNGKTASWEAVVLLSFVDEKRLIETLKPIEAKLTPEETKRNSFGTDIEFIHN 655
Query: 624 PQ 625
PQ
Sbjct: 656 PQ 657
>gi|146423491|ref|XP_001487673.1| hypothetical protein PGUG_01050 [Meyerozyma guilliermondii ATCC
6260]
Length = 1378
Score = 265 bits (677), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 140/355 (39%), Positives = 210/355 (59%), Gaps = 41/355 (11%)
Query: 56 MNGIIHPCFHPDGKPAPTSYDD-VFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQ 114
MN I+H C H + DD ++ +IF YI+H+F +++P+ + Y+AIDGVAPRAKMNQ
Sbjct: 1 MNSILHTCTHSNDDTLSRMTDDQMYAAIFSYIEHLFEIIKPKGVFYMAIDGVAPRAKMNQ 60
Query: 115 QRTRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAA 174
QR RRFR A +A EE L+K + ++ K + DSN ITPGT+FMA L+
Sbjct: 61 QRARRFRTAYEA------EENLKKAILQGLEI----PKDDPFDSNAITPGTEFMAKLTEN 110
Query: 175 LQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLD 234
L+YFI +++ W T +ILS VPGEGEHKIM+YIR ++ P ++ N+RHC+YGLD
Sbjct: 111 LKYFIHKKISTDSRWAETVIILSGHEVPGEGEHKIMNYIRTMKSQPNYNSNSRHCIYGLD 170
Query: 235 ADLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDD 294
ADLIML L +H+ HF +LRE +T P N +D
Sbjct: 171 ADLIMLGLVSHDPHFCLLREEVTF--------------------------GPRSGNKSND 204
Query: 295 TPIHKKKYQFLNIWVLREYLQYEL-DIPNP-PFPINFERIVDDFVFLCFFVGNDFLPHMP 352
+H +K+ L+I +LREY+ E D+ N F +FER++DD + + + +GNDFLP +P
Sbjct: 205 --LHDQKFFLLHISLLREYISLEFQDMDNDVSFEFDFERVLDDLILIMYVIGNDFLPSLP 262
Query: 353 TLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQK 407
L I +GA LL+ +++ GY+ + G + L R+ +++ ++ +E + F+K
Sbjct: 263 DLYINKGAFPLLLETFKQALAESDGYINENGTINLKRLAIWLRHLSEFELENFEK 317
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 85/182 (46%), Positives = 116/182 (63%), Gaps = 9/182 (4%)
Query: 451 YKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFAS 510
+K++YY +KF+ S ++ + V ++ Y+EGL WV YYYQ SW W+Y YHYAP S
Sbjct: 478 WKDQYYQEKFKFSIHDKEEMV--NLTEHYIEGLQWVLYYYYQGCPSWSWYYRYHYAPRIS 535
Query: 511 D----LKDL--SDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKF 564
D L+++ ++ +ITF LG PF+PF+QLM LPA S +P +YR LMT+ SPI F
Sbjct: 536 DISIGLENMLENNKKITFELGTPFKPFEQLMAVLPARSRKLMPLEYRPLMTESHSPIIDF 595
Query: 565 YPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVH- 623
YP IDMNGK +W+ VV L F+DEK L+ K +E LT EE RNS D+ ++H
Sbjct: 596 YPDKVDIDMNGKTASWEAVVLLSFVDEKRLIETLKPIEAKLTPEETKRNSFGTDIEFIHN 655
Query: 624 PQ 625
PQ
Sbjct: 656 PQ 657
>gi|340508935|gb|EGR34531.1| hypothetical protein IMG5_008400 [Ichthyophthirius multifiliis]
Length = 263
Score = 264 bits (675), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 135/275 (49%), Positives = 183/275 (66%), Gaps = 18/275 (6%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPAF+RWL R P I+D E + E + P N E NLYLDMNGII
Sbjct: 1 MGVPAFFRWLCSRNPQFILDAFE-----NYENFSEP-------SNNPEIHNLYLDMNGII 48
Query: 61 HPCFHPDGK--PAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
HPC DG P P + D+F +IF YID + + RP+++LY+AIDGVAPRAKMNQQR R
Sbjct: 49 HPCCRSDGSAMPIPNTIQDMFNNIFMYIDKLMDICRPQRILYMAIDGVAPRAKMNQQRAR 108
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEK---PETCDSNVITPGTQFMAVLSAAL 175
RF+ AK+A E + ++ + E + G+ + + D+NVITPGTQFM LS AL
Sbjct: 109 RFKGAKEAVELQKKKLEIINEQRQQGEDIPEEVMRFVESKFDTNVITPGTQFMRDLSIAL 168
Query: 176 QYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDA 235
Q+++ R+N P W+ KV+ SDA++PGEGEHKI+++IR+QR+ +DPN++HCLYG DA
Sbjct: 169 QHYVLDRVNNHPLWKNLKVVFSDASIPGEGEHKILNFIRIQRSQDQYDPNSKHCLYGADA 228
Query: 236 DLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQ 270
DL+ML L+THE +F I+RE I + +++C VCGQ
Sbjct: 229 DLLMLGLSTHEPYFYIIREQI-ISNDEKRCSVCGQ 262
>gi|320580141|gb|EFW94364.1| 5'-3' exoribonuclease, putative [Ogataea parapolymorpha DL-1]
Length = 1369
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 139/334 (41%), Positives = 204/334 (61%), Gaps = 39/334 (11%)
Query: 76 DDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRFRAAKDAAEAEAEEER 135
D +F +IF YIDH+F +++P+K+ Y+AIDGVAPRAKMNQQR RRFR+A +A E+
Sbjct: 4 DQMFGAIFAYIDHLFNIIKPQKVFYMAIDGVAPRAKMNQQRARRFRSAIEA------EQN 57
Query: 136 LRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQARLNQIPGWQFTKVI 195
L K +E ++ KE P DSN ITPGT+FMA L+ L+++I + + WQ ++I
Sbjct: 58 LEKAIKEGKEI--PKEPP--FDSNAITPGTEFMAKLTQNLKFYINQKASSDSRWQNMRII 113
Query: 196 LSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIMLSLATHEIHFSILREV 255
LS VPGEGEHKIM +IR Q+ P +DPNTRHC+YGLDADLIML L HE HF++LRE
Sbjct: 114 LSGHEVPGEGEHKIMDFIRTQKAQPDYDPNTRHCVYGLDADLIMLGLVAHEPHFALLREE 173
Query: 256 ITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIHKKKYQFLNIWVLREYLQ 315
+T + A H D + ++ + L+I ++REY++
Sbjct: 174 VTFGPK--------------ANSHS-------------DDDLTQQTFFLLHISLVREYME 206
Query: 316 YELD--IPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHVYRREFT 373
E F +FERI+DDF+ + + +GNDFLP++P L + +GA LL+ ++
Sbjct: 207 LEFQELQDQLSFEYDFERIIDDFILIMYVIGNDFLPNLPDLHLNKGAFPLLIETFKEAIR 266
Query: 374 AMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQK 407
M GY+ + G + L R K+++ ++V+E + F+K
Sbjct: 267 DMDGYINEFGTINLQRFGKWLEYLSVFELENFEK 300
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 81/176 (46%), Positives = 107/176 (60%), Gaps = 3/176 (1%)
Query: 451 YKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFAS 510
+K YY K S +E DK++ D+ Y+EGL WV YYY+ + SW W+Y YHYAP S
Sbjct: 463 WKNEYYKKKVGFSLNDE-DKIR-DMAENYIEGLQWVLNYYYKGISSWPWYYRYHYAPRIS 520
Query: 511 DLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQ 570
D+ +++I F G PF+PF QLM LPA S +P YR LMTD +SPI FYP D +
Sbjct: 521 DVSKGLNVKINFEKGHPFKPFQQLMAVLPARSKELIPTVYRPLMTDSNSPIIDFYPDDCE 580
Query: 571 IDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDL-LYVHPQ 625
+DMNGK+ W+ VV L F+DEK L+ + L+ EE RNS DL + +PQ
Sbjct: 581 VDMNGKKAPWEAVVLLSFVDEKRLIEAMAPFDSKLSPEEKQRNSFGTDLQFHFNPQ 636
>gi|300706190|ref|XP_002995390.1| hypothetical protein NCER_101741 [Nosema ceranae BRL01]
gi|239604457|gb|EEQ81719.1| hypothetical protein NCER_101741 [Nosema ceranae BRL01]
Length = 616
Score = 263 bits (673), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 184/661 (27%), Positives = 309/661 (46%), Gaps = 94/661 (14%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP + WL ++P D + + P VD+ LY+D N II
Sbjct: 1 MGVPILFSWLNKKFP----DCITQKP-------PEQVDI------------LYIDYNAII 37
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
H C++P+ Y+D+ + +D+I +PRK+LY+A+DGVAP AK+ QR RR+
Sbjct: 38 HNCYNPNLGSLDKIYEDMIDRLTKMVDNIVEKAKPRKILYIAVDGVAPAAKLAHQRGRRY 97
Query: 121 RAAKDAA------EAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAA 174
+AA + A + + E +E G L S DSN ITPGT+ M L
Sbjct: 98 KAASEKAGPNGYIDFSSNVEITTQE----GALTSKPPTANIFDSNSITPGTELMKFLHKN 153
Query: 175 LQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLD 234
+ + LN P ++ K++ S VPGEGE KIM+++R + +L +P H +Y D
Sbjct: 154 IIDMLIYNLNTNPNYKDLKILYSSYLVPGEGEQKIMAFLR-KYHLS--NPKDTHVMYSPD 210
Query: 235 ADLIMLSLATHEIHFSILRE-VITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVD 293
D+I L ++ ++++ I+RE ++E C +C ++GH + +C N D
Sbjct: 211 GDIIFLGVSLYDVNLYIMREDTFNSKNKKEICRMCSRMGHFSEQC------NRPDLLIYS 264
Query: 294 DTPIHKKKYQFLNIWVLR-EYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMP 352
+ K + L I+ ++ EY++ +R++ D+V +CF +GNDFLP +P
Sbjct: 265 YIDVPKFRASLLKIFNIKIEYVE--------------KRMLTDWVLVCFLLGNDFLPGIP 310
Query: 353 TLEIREGAINLLMHVYRREFTAMGGYL-TDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRI 411
++I+ G+I L FT Y+ T+ + +E F ++ E+ + +T++
Sbjct: 311 CVDIKIGSIENLTSTLCDNFTNCKDYITTEDKNINFKILECFFVLLSTRENDWYNNKTKM 370
Query: 412 QQAYEYNEAMKLNARRESSEELLQAPVAVADTVKLGEPGYKERYYADKFEISNPEEIDKV 471
L ++ + + ++L P +++YY KF + + +
Sbjct: 371 ---------------------LNRSCNFIREEIQLNTPQGRQKYYNSKFGAHCEADFNNI 409
Query: 472 KKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDLEITFFLGEPFRPF 531
++ Y+ G+ W YY SW W YPYH+APF DL ++ G PF
Sbjct: 410 SQE----YITGILWTFNYYIGGKTSWDWVYPYHFAPFVRDLVNVVRAHYDLKKGCVLTPF 465
Query: 532 DQLMGTLPAASSSALPEKYRNLMTDPSSPIYK-FYPPDFQIDMNGKRFAWQGVVKLPFID 590
+QLM +P S + + EK R + + YK YP + DM K W GVV LP +
Sbjct: 466 EQLMVVIPPQSKNLVTEKLRYIFDE-----YKDLYPLTIKFDMFDKYLLWTGVVLLPPFN 520
Query: 591 EKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVHPQHPLYQQITLYCQLYHQLPPQDRFAW 650
+++L K ++ EL RN+ +LL+V ++ + +LY L P F +
Sbjct: 521 SQVVLNAVKGKINEISASELDRNTEESELLFVSDEN----SVNNLQKLYFDLKPAATFVF 576
Query: 651 E 651
+
Sbjct: 577 D 577
>gi|224587591|gb|ACN58687.1| 5-3 exoribonuclease 2 [Salmo salar]
Length = 713
Score = 263 bits (671), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 164/449 (36%), Positives = 237/449 (52%), Gaps = 65/449 (14%)
Query: 242 LATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNG-VDDTPIHKK 300
LATHE +F+I+RE P Q C +CGQ GH +C G + + + D P ++
Sbjct: 1 LATHEPNFTIIREEFK-PNQPRPCAMCGQKGHELKDCQGVAREKQGEHDEFADAMPASEQ 59
Query: 301 KYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGA 360
++ F+ + VLREYL+ EL + + PFP +FER VDD+VF+CFFVGNDFLPH+P+LEIREGA
Sbjct: 60 EFIFIRLCVLREYLERELTMASLPFPFDFERTVDDWVFMCFFVGNDFLPHLPSLEIREGA 119
Query: 361 INLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAY---EY 417
I+ L+ +Y+ GGY+T+ G V L+ VE +Q++ V ED IF+KR + +
Sbjct: 120 IDRLVGIYKDVVHKTGGYITENGFVKLESVELIMQAIGVAEDNIFKKRKEDDEGFKRRNK 179
Query: 418 NEAMKLNARRESSEELLQAPVAVADTVKLGEPGYKERYYADKFEI-------------SN 464
+ ++ A+++ L A G P + F++ S+
Sbjct: 180 EKKKRMKAQQQGPSFLTSGQFAPQALGGRGRPEVVQNARHQAFDMRMQGRDQHNRAGTSD 239
Query: 465 PEEIDKVKK------------DVVLKYVEGLCWVCRYY--------------------YQ 492
++ VK+ D V + +G W RYY Y
Sbjct: 240 GQDGRGVKRKAEDSDSEPDPEDNVRLWEDG--WKQRYYKTKFDVDATDDDFRKKVVMSYV 297
Query: 493 DVCSWQWFYPY------------HYAPFASDLKDLSDLEITFFLG-EPFRPFDQLMGTLP 539
+ W Y Y HYAPFASD KD+ + F LG +PF+P +QLMG P
Sbjct: 298 EGLCWVLRYYYQGCASWKWYFPFHYAPFASDFKDIKGMFTDFELGTKPFKPLEQLMGVFP 357
Query: 540 AASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTK 599
AAS + LPE +R+LM++P S I FYP DF ID+NGK++AWQGV LPF+DE+ L
Sbjct: 358 AASGNFLPETWRSLMSNPESSIIDFYPDDFAIDLNGKKYAWQGVALLPFVDERRLRAALA 417
Query: 600 KLEVFLTEEELFRNSVMLDLLYVHPQHPL 628
++ L+ EE RNS+ D+L+V H +
Sbjct: 418 EVYPNLSPEENKRNSLGSDMLFVGKSHSI 446
>gi|367000872|ref|XP_003685171.1| hypothetical protein TPHA_0D00960 [Tetrapisispora phaffii CBS 4417]
gi|357523469|emb|CCE62737.1| hypothetical protein TPHA_0D00960 [Tetrapisispora phaffii CBS 4417]
Length = 1313
Score = 261 bits (668), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 151/415 (36%), Positives = 232/415 (55%), Gaps = 64/415 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MG+P F+R++++R+P+ I+ VE D + G FD LYLDMN I
Sbjct: 1 MGIPKFFRYISERWPM-ILQQVEPD-KTPG------------------FDYLYLDMNSIF 40
Query: 61 HPCFHP----DGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQR 116
H H D T+ + ++ IF YIDHIFL+++P ++Y+AIDGVAPRAKMNQQR
Sbjct: 41 HMATHSNDVSDDVGKGTTDEVIYSRIFTYIDHIFLMIKPTTIIYMAIDGVAPRAKMNQQR 100
Query: 117 TRRFRAAKDAAEA-EAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAAL 175
+RR R A DA +A +A + + +E ++ E D N ITPGT+FMA L+ L
Sbjct: 101 SRRIRTAMDAEKAIDAMKNAIGEENWDSSM--------EPFDKNSITPGTEFMAQLTINL 152
Query: 176 QYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDA 235
+YFI + W+ +VI S VPGEGEHKIM YIR ++ +DPN+RHC+YG DA
Sbjct: 153 KYFIHEKKTNDSNWRDVQVIFSGHEVPGEGEHKIMDYIRKLKSQRDYDPNSRHCIYGSDA 212
Query: 236 DLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDT 295
DLI+L L+TH H ++LRE + G+ D A
Sbjct: 213 DLIILGLSTHIPHLAVLREEMIF---------------------GRKKDIRA-------- 243
Query: 296 PIHKKKYQFLNIWVLREYLQYEL-DIPNP-PFPINFERIVDDFVFLCFFVGNDFLPHMPT 353
+ + + L++ +LREYL+ E D+ F +FERI+DDFV + F +GNDFLP++P
Sbjct: 244 GLEAQNFLLLHMSILREYLELEFEDLKTKLSFKYDFERIIDDFVLILFVIGNDFLPNLPD 303
Query: 354 LEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKR 408
L + +GA +++ +++ ++ Y+ G + L+R+ ++ ++ +E F+++
Sbjct: 304 LHLNKGAFPVILETFKKALMSLDSYINFNGTINLERLGVWLDYLSHFEFMNFKQK 358
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 73/174 (41%), Positives = 99/174 (56%), Gaps = 1/174 (0%)
Query: 450 GYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFA 509
+K+ YY K E S + ++ ++ YVEGL WV YYY++ SW W+Y YHYAP
Sbjct: 495 SWKQNYYKSKLEFSETSYGEDLR-NLTANYVEGLQWVLDYYYKECPSWSWYYKYHYAPRI 553
Query: 510 SDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDF 569
SDL+D I F EPF PF QLM LP+ SS +P +R LM DPSSPI FYP
Sbjct: 554 SDLRDGLKQRIVFDQDEPFTPFQQLMAVLPSRSSKLIPSIFRPLMLDPSSPIIDFYPTTV 613
Query: 570 QIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVH 623
+ D NGK W+ VV + F+D+ L+ K LT EE RN+ ++++ +
Sbjct: 614 KFDKNGKAADWEAVVLISFVDQDRLINAMKPFLNLLTPEEASRNAHGSNIMFFY 667
>gi|164655455|ref|XP_001728857.1| hypothetical protein MGL_4024 [Malassezia globosa CBS 7966]
gi|159102743|gb|EDP41643.1| hypothetical protein MGL_4024 [Malassezia globosa CBS 7966]
Length = 1426
Score = 261 bits (667), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 152/384 (39%), Positives = 213/384 (55%), Gaps = 58/384 (15%)
Query: 76 DDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRFRAAKDAAEAEAEEER 135
+D+F IF YI+H+F +RPRK+ +LAIDGVAPRAKMNQQR+RRFR A++A E + R
Sbjct: 4 EDIFLGIFAYIEHLFSKIRPRKVFFLAIDGVAPRAKMNQQRSRRFRTAQEAKENVEKAIR 63
Query: 136 LRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQARLNQIPGWQFTKVI 195
+E E+ DSN ITPGT FM LS L+YF+ ++++ W+ +VI
Sbjct: 64 RGEELPESPPF----------DSNCITPGTSFMRKLSQQLEYFVAKKVSEDSDWRGVEVI 113
Query: 196 LSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIMLSLATHEIHFSILREV 255
LS GEGEHKIM +IR + PG++PNTRHCLYGLDADLIML L +H+ HF++LRE
Sbjct: 114 LSGHEACGEGEHKIMEFIRTIKAQPGYNPNTRHCLYGLDADLIMLGLLSHDPHFALLREQ 173
Query: 256 ITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIHKKKYQFLNIWVLREYLQ 315
+T ++ + V + + + L+I +LREYL+
Sbjct: 174 VTFGPRRARRSVG----------------------------VESQTFYLLHISLLREYLE 205
Query: 316 YELDI--PNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHVYRREFT 373
E PF + E+I+DD++ L FVGNDFLPH+P L+I +GAI LL VY +
Sbjct: 206 LEFASLRDKLPFAFDLEKIIDDYILLHLFVGNDFLPHLPGLQINDGAIELLFRVYEKVLP 265
Query: 374 AMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQ-KRTRIQQAYEYNEAMKLNARRESSEE 432
GGYL + G + +R++ I +Q+FQ +R R + K ARR + E
Sbjct: 266 QAGGYLNEQGVLRPERLQLVI-------NQLFQLERDRFVHQHMPQLEQKTKARR--TRE 316
Query: 433 LLQAPVAVADTVKLGEPGYKERYY 456
L ++G P Y R +
Sbjct: 317 L--------KNYRVGAPKYIRRAH 332
Score = 166 bits (419), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 83/175 (47%), Positives = 111/175 (63%), Gaps = 6/175 (3%)
Query: 451 YKERYYADKFEI--SNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPF 508
+K YY K I ++P+ I +D+V Y+EG+ WV YYY+ SW WFY YHYAP
Sbjct: 485 WKADYYHTKMGIKYNDPDAI----QDIVYNYIEGMQWVLYYYYEGNASWGWFYRYHYAPQ 540
Query: 509 ASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPD 568
SDLK++SD F G PF PF+QLMG LP S +P ++ LMTDPSSPI FYP
Sbjct: 541 VSDLKNISDFTFQFNKGRPFLPFEQLMGVLPPLSKDLIPPAFQPLMTDPSSPILDFYPTK 600
Query: 569 FQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVH 623
++ DMNGK+ +W+ VVK+PFIDE+ LL + E LT EE RN++ + L + +
Sbjct: 601 YESDMNGKKNSWEAVVKIPFIDEERLLHALQLREGGLTAEERQRNTLGVPLRFCY 655
>gi|326435791|gb|EGD81361.1| hypothetical protein PTSG_11834 [Salpingoeca sp. ATCC 50818]
Length = 1592
Score = 261 bits (666), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 136/253 (53%), Positives = 177/253 (69%), Gaps = 5/253 (1%)
Query: 32 GVARPVDVSKPNPNGMEFDNLYLDMNGIIHPCFHPDGKPAPTSYDDVFKSIFDYIDHIFL 91
G R ++ ++P +G+EFDNLYLDMNGIIHPC HP+ + P + + + ++IF+YIDH+F
Sbjct: 303 GELRTLEAAQPEHDGIEFDNLYLDMNGIIHPCCHPEDREPPATEEAMMEAIFEYIDHVFT 362
Query: 92 LVRPRKLLYLAIDGVAPRAKMNQQRTRRFRAAKDAAEAEAEEERLRKEFEEAGKL----L 147
LVRPR+LLYLAIDGVAPRAKMNQQR RRFR+A++A + + E+ + E G
Sbjct: 363 LVRPRRLLYLAIDGVAPRAKMNQQRARRFRSAQEAEDRKRVIEKRVEALEADGVAPKYYY 422
Query: 148 SAKEKPETCDSNVITPGTQFMAVLSAALQYFIQARLNQIPGWQFTKVILSDANVPGEGEH 207
+K + DSN ITPGT FMA L+ L+ +I RL+ W+ +VILSDA+VPGEGEH
Sbjct: 423 QVTKKKMSFDSNCITPGTPFMARLAQRLREYIDDRLHSNAAWKDVQVILSDASVPGEGEH 482
Query: 208 KIMSYIRLQRNLPGFDPNTRHCLYGLDADLIMLSLATHEIHFSILREVITLPGQQEKCFV 267
KIM +IR Q++LP +DPN RH LYG DADLIML LATHE HF I+RE +P ++ C +
Sbjct: 483 KIMDFIRQQQSLPSYDPNMRHVLYGADADLIMLGLATHEPHFYIIREEF-VPPPKKPCPI 541
Query: 268 CGQVGHLAAECHG 280
CG GH EC G
Sbjct: 542 CGFRGHALNECTG 554
Score = 159 bits (403), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 80/176 (45%), Positives = 108/176 (61%), Gaps = 6/176 (3%)
Query: 450 GYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFA 509
G+KE YY KFE + +D+ Y EG+CWV YY+Q SW W+Y YHYAPF
Sbjct: 1218 GFKEMYYRKKFESAASGAT--FLRDLATAYTEGVCWVMLYYFQGCPSWSWYYKYHYAPFC 1275
Query: 510 SDLK--DLSDLEITF-FLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYP 566
SD D+ + + F PFRP +QLMG P ASSS LP ++ LMT S+ + +FYP
Sbjct: 1276 SDFAALDMDTVSLPFPDDSTPFRPLEQLMGVFPPASSSFLPARWAKLMTGKSA-VSRFYP 1334
Query: 567 PDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYV 622
F++D+NGK++AWQGV LPF+DE +LL ++ LT EE RN+ DLL++
Sbjct: 1335 SSFRVDLNGKKYAWQGVTLLPFMDEDVLLTALDRVYPSLTGEEAHRNAFGHDLLFL 1390
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 51/78 (65%)
Query: 331 RIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRV 390
R+VDD+V LC VGNDFLPH+P+L I EGAI+ L +Y ++GG+L D G V L R+
Sbjct: 801 RMVDDWVLLCCLVGNDFLPHLPSLSIHEGAIDTLTRLYATMQRSLGGFLHDNGHVNLPRL 860
Query: 391 EKFIQSVAVYEDQIFQKR 408
F+ + ED + ++R
Sbjct: 861 GMFLARLGTMEDHVIRQR 878
>gi|407849157|gb|EKG03993.1| 5'-3' exonuclease XRNA, putative [Trypanosoma cruzi]
Length = 383
Score = 259 bits (661), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 157/402 (39%), Positives = 217/402 (53%), Gaps = 50/402 (12%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEE--DPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNG 58
MG+ FY WL Y + DV EE +DG+ + D ++ FDN YLDMNG
Sbjct: 1 MGIAGFYLWLQRWYGDCVEDVPEEVVKAALDGQPLPASSDTTQ------RFDNFYLDMNG 54
Query: 59 IIHPCFHPDGKPAPTSYDDVFKS-IFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRT 117
+IHPC H ++ IF +D ++ +VRPRK L L IDGVAP++KMNQQR+
Sbjct: 55 LIHPCCHDTAPLPEPESEEEMFERIFAQVDLLYKIVRPRKCLVLCIDGVAPQSKMNQQRS 114
Query: 118 RRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQY 177
RRFRAA++ E+E + +E + G L + D NVITP T FM + A+++
Sbjct: 115 RRFRAAEERIESEVFSAQCAEEVVKKG--LPLPQTRSRWDHNVITPSTPFMERVGLAIEW 172
Query: 178 FIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADL 237
FI ++N+ P W+ VI SDA+VPGEGEHKIM YIR R G++P T H ++G+DADL
Sbjct: 173 FIMKKINEDPAWRHIAVIFSDAHVPGEGEHKIMHYIRELRAQLGYNPQTSHVIHGMDADL 232
Query: 238 IMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPI 297
I L L+THE H +ILR +T Q P
Sbjct: 233 ICLGLSTHEEHVTILRNQLTETFQ----------------------------------PD 258
Query: 298 HKKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIR 357
H ++ + +++ R L+ D ++FER++DDF+FLCFFVGNDFLPH+P + I+
Sbjct: 259 H-NRFCYFSLYKYRLRLR---DDFGGIGQMDFERVLDDFIFLCFFVGNDFLPHVPLISIK 314
Query: 358 EGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAV 399
I LL+ Y R F YLT GEV + KF++ V
Sbjct: 315 TKGIELLLDHYVRGFKDH-SYLTHGGEVNYGNLTKFLRFFVV 355
>gi|269861191|ref|XP_002650309.1| 5'-3' exonuclease [Enterocytozoon bieneusi H348]
gi|220066257|gb|EED43747.1| 5'-3' exonuclease [Enterocytozoon bieneusi H348]
Length = 623
Score = 258 bits (660), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 203/672 (30%), Positives = 309/672 (45%), Gaps = 119/672 (17%)
Query: 50 DNLYLDMNGIIHPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPR 109
DNLYLD N IIHPC + + K +D++ ++ Y+D + +P+KL+Y+AIDGVAP+
Sbjct: 10 DNLYLDFNAIIHPCTNRELKDLDKLNEDLYHNLEAYLDALIAYCKPKKLIYIAIDGVAPK 69
Query: 110 AKMNQQRTRRFRAAKDAAEAEA----EEERLRKEFEEAGKLLSAKEKPETCDSNVITPGT 165
AKMNQQRTRRFR AK+ E E E+ + E D N ITPGT
Sbjct: 70 AKMNQQRTRRFRGAKEVYENNIVYLDEHEKYDNPYLEVA-----------FDHNAITPGT 118
Query: 166 QFMAVLSAALQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPN 225
FM L + IQ +L+ P W VI S+ VPGEGE KIM Y+R+ + +
Sbjct: 119 IFMEQLDEFISNLIQFKLSTDPLWANKTVIYSNYKVPGEGEQKIMEYLRIHKK----NLR 174
Query: 226 TRHCLYGLDADLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDN 285
H +Y DADLI L L + I+RE + E
Sbjct: 175 ESHVIYSPDADLIFLGLTLPNYNIRIMREEVKYKEDTEI--------------------- 213
Query: 286 PADWNGVDD--TPIHKKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFV 343
P D N +D+ I++ K + L I L+ L+ N ER++ DF+FLCF +
Sbjct: 214 PKDRNYLDNHFVLINENKLKNLIIDQLKTGLEDNF---------NGERLLFDFIFLCFTI 264
Query: 344 GNDFLPHMPTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEK--FI-----QS 396
GNDFLP P EIR A+ + R + Y+TD G ++ + K FI ++
Sbjct: 265 GNDFLPSAPCFEIRTNAVEKIAEFLIRAYKRSRTYITDFGGIVNFKALKEFFIECEKDEN 324
Query: 397 VAVYEDQIFQKRTRIQQAYEYNEAMKLNARRESSEELLQAPVAVADTVKLGEPGYKERYY 456
+ + E +I +++R + E+NE ++ E K +YY
Sbjct: 325 INLKEKRINLQKSRNRMDLEFNEDVEFEICEEEG---------------------KLKYY 363
Query: 457 ADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLS 516
+K +I++ E++ K+ Y++G+ W+ +YY+ + SW ++YPY++APF DL L
Sbjct: 364 IEKMDINSEEKLMIACKE----YIKGMVWIYQYYFFNCPSWDYYYPYYFAPFMFDLMALE 419
Query: 517 DLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPS------------------ 558
+ F +P +PF+QL+ LPA S LPE YR D
Sbjct: 420 VENLYFTPSKPLKPFEQLLCVLPALSMHLLPEPYRKYYYDNKMIKLLVPGELTKNGYIKE 479
Query: 559 -SPIYK------------FYPPD--FQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEV 603
+ IYK F PD F+ID K WQ +PF++ K +L ++K +
Sbjct: 480 YNSIYKTNNNENYNLKDIFEFPDLNFKIDSFHKIMNWQYTAIIPFVNNKNILEYSRKYQN 539
Query: 604 FLTEEELFRNSVMLDLLYVHPQHPLYQQITLYCQ---LYHQLPPQDRFAWEIDVNASGGM 660
LT EE+ RN + +L+ + + +Y + LY++ + ID N +
Sbjct: 540 SLTYEEINRNIIGFPVLFTNKDKIIQHHKEIYGKPYVLYNENEYCGKVFMTIDSNFINDI 599
Query: 661 NGYIWLCERNGL 672
W +N +
Sbjct: 600 IKTKWFVYKNKV 611
>gi|296817211|ref|XP_002848942.1| exonuclease II Exo2 [Arthroderma otae CBS 113480]
gi|238839395|gb|EEQ29057.1| exonuclease II Exo2 [Arthroderma otae CBS 113480]
Length = 1412
Score = 256 bits (654), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 156/432 (36%), Positives = 233/432 (53%), Gaps = 89/432 (20%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP F+RWL++RYP +I ++ E+ EFD LYLDMNGII
Sbjct: 1 MGVPKFFRWLSERYP-AISQLIAEN-------------------RIPEFDCLYLDMNGII 40
Query: 61 HPCFHPDG-KPA-PTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C H D PA + D +F +IF+YI+H+F ++P++L ++AIDGVAPRAKMNQQR R
Sbjct: 41 HNCTHKDSDSPAFRMTEDKMFIAIFNYIEHLFGKIKPKRLFFMAIDGVAPRAKMNQQRAR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RFR A DA A+ E+ +R+ E K + DSN ITPGT+FM L+ L+YF
Sbjct: 101 RFRTALDAELAK--EKAIREGVE--------MPKEDAFDSNCITPGTEFMTKLTKQLRYF 150
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
I ++++ WQ +V+LS VPGEGEHKIM YIR + P +DPN RHC
Sbjct: 151 INKKVSEDAEWQGVEVVLSGHEVPGEGEHKIMEYIRQAKAQPEYDPNMRHCF-------- 202
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
+SL + E +V T ++ K +
Sbjct: 203 TISLCSRE------SDVWTAEPEEIK-------------------------------ELE 225
Query: 299 KKKYQFLNIWVLREYLQY---ELDIPNP-PFPINFERIVDDFVFLCFFVGNDFLPHMPTL 354
+ + L++ ++REYL+ EL + FP + ER++DDF+ + FFVGNDFLP++P L
Sbjct: 226 HQNFYLLHLCIVREYLELEFQELKLDGALQFPFDMERVIDDFILMAFFVGNDFLPNLPNL 285
Query: 355 EIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQA 414
I EGA+ + VY+ +GGY+ + G++ ++R+ + +++ E + F+
Sbjct: 286 HINEGALAWMFKVYKEVLPKLGGYVNEHGKINMERLRTLLAALSDVEFRFFEA------- 338
Query: 415 YEYNEAMKLNAR 426
EY++A L ++
Sbjct: 339 -EYSDARWLKSK 349
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 82/175 (46%), Positives = 111/175 (63%), Gaps = 6/175 (3%)
Query: 451 YKERYYADKFE--ISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPF 508
+K++YY +KF + N EE+ K+ ++ YV+GL WV YYY+ V SW WFY YHYAP
Sbjct: 494 WKDKYYKEKFGWGLENTEEMRKLTEN----YVQGLQWVLFYYYRGVASWPWFYRYHYAPM 549
Query: 509 ASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPD 568
SD+ ++ F LG+PF PF QLMG LP S +P Y +LMT P SPI FYP D
Sbjct: 550 ISDIHLGLGADVEFKLGQPFFPFQQLMGVLPDRSKKIVPVAYHSLMTTPESPIIDFYPRD 609
Query: 569 FQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVH 623
F++DMNGK+ W+ VVK+PFIDE+ LL+ E LT +E RN+ + L + +
Sbjct: 610 FELDMNGKKMEWEAVVKIPFIDEERLLKAMATKEHLLTPDEKARNTFGVTLKFTY 664
>gi|428673024|gb|EKX73937.1| XRN 5'-3' exonuclease family protein [Babesia equi]
Length = 1049
Score = 256 bits (653), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 185/654 (28%), Positives = 296/654 (45%), Gaps = 106/654 (16%)
Query: 2 GVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGIIH 61
GVP Y W+ + + G+ +P+ S NG+++ Y+DMN +IH
Sbjct: 441 GVPRLYSWMIENF----------------YGMRKPLKSSDLE-NGVDY--FYVDMNALIH 481
Query: 62 PCFHPDGKPAPTSYDDV-FKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
H + P T D K I + + F LV+PRK++Y+A+DGV P AK+NQQRTRRF
Sbjct: 482 SATHGNIYPVVTIEDQQRMKRITAALLNTFKLVKPRKVMYIAVDGVCPSAKINQQRTRRF 541
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPE---------------TCDSNVITPGT 165
R K + ++ E E PE + + N I+PGT
Sbjct: 542 RLCKVIDKVKSILEPEEDTESEEDSEEPKPLTPENYVLRKSKIDGYDNISFNPNYISPGT 601
Query: 166 QFMAVLSAALQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPN 225
FM L ++ +I A + W V+ S NVPGEGEHKI IR + D
Sbjct: 602 DFMTRLDNEIKNWI-ALQTHLGTWGDCYVVYSGTNVPGEGEHKIYDLIR---KVTTLDRK 657
Query: 226 TR---HCLYGLDADLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKP 282
TR H +YGLDADL++LSL T ILRE EK + + + +
Sbjct: 658 TRLESHLVYGLDADLMILSLITKMSKMYILRE--------EKDSTPHVLAKIKPDPYYAK 709
Query: 283 GDNPADWNGVDDTPIHKKKYQFLNIWVLR--------EYLQYELDIPNPPFPINF---ER 331
++ D + ++ L++ LR Y+ + + F R
Sbjct: 710 DTGLVHFHSKDYIGLKSDNFEVLSMRKLRAGMYNRCVNYVNTKFKPKDSAFLTKKGTPAR 769
Query: 332 IVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVE 391
+ DDF L FF GNDFLPH+P +++++ + L++ Y G+LT ++ R++
Sbjct: 770 LTDDFALLSFFAGNDFLPHLPNVDLKDSSFTDLINTYYSLLPKFNGFLTHGLKIHTRRLQ 829
Query: 392 KFIQSVAVYEDQIFQKRTRIQQAYEYNEAMKLNARRESSEELLQAPVAVADTVKLGEPGY 451
+++++ E + F+ + ++ E+ ++ GY
Sbjct: 830 SLMKAISPNEAKYFKIKAEVESVPEFADS----------------------------SGY 861
Query: 452 KERYYADKFEI--SNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFA 509
+ YY +K I ++ I K+ +D Y+EGL W YY+ SW W Y YHYAP A
Sbjct: 862 AKFYYEEKCGIDYNDKRAIRKMCED----YIEGLFWNLSYYHSGCPSWDWCYKYHYAPLA 917
Query: 510 SDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYR-----------NLMTDPS 558
SDL +S + +TF+ G P P + L+ P + + LP +YR L+++P
Sbjct: 918 SDLARVSSISVTFYKGNPITPLEHLLAVTPPSGNELLPPRYRFVIFHSACSLFRLLSEPK 977
Query: 559 SPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFR 612
+ +++P DF+I +GK W+ VKLPF++ + L + + + L L+R
Sbjct: 978 GELCEYFPEDFEICQDGKEHEWEYTVKLPFLNTRKLSKIARSVNDELEYRTLYR 1031
>gi|326437826|gb|EGD83396.1| single-stranded RNA 5'-3' exonuclease [Salpingoeca sp. ATCC 50818]
Length = 1780
Score = 251 bits (640), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 156/429 (36%), Positives = 215/429 (50%), Gaps = 97/429 (22%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP +R L +RYPL + + E P EFDNLYLD NGI+
Sbjct: 1 MGVPRLFRLLVERYPLILRGLDEPPPP--------------------EFDNLYLDFNGIV 40
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
H C H + A S ++ +IF I+ + ++PRK+L++AIDGVAPRAKM QQR RRF
Sbjct: 41 HTCTHGNELAATRSQQEMMMAIFSAIEQLVDAIKPRKVLFIAIDGVAPRAKMIQQRQRRF 100
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQ 180
+AA R RK+F++ E + DSN ITPGT+FMA L L YFIQ
Sbjct: 101 KAA-----------RARKQFQQ-----DNPEHGDAFDSNCITPGTEFMATLEEYLIYFIQ 144
Query: 181 ARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
++ + W+ +V+LS VPGEGEHKIM ++R ++ +DPNTRHC++GLDADLIML
Sbjct: 145 RKVEEDAAWRDLEVVLSGHRVPGEGEHKIMDFVRRLKSQESYDPNTRHCIHGLDADLIML 204
Query: 241 SLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIHKK 300
+LATHE HF I+RE + + + K D H +
Sbjct: 205 ALATHEPHFCIVREKVLVRKRGRKIV--------------------NDLTSKATVFQHTQ 244
Query: 301 KYQFLNIWVLREYLQYELDIPN--PPF--------------------------------- 325
+ Q ++I +LREYL EL + N P F
Sbjct: 245 ELQLIHIGLLREYLHLELSLRNIGPDFRQGLVSSAAALRDAMVDAKFRQLPEEMQALRTS 304
Query: 326 ---PINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHVYRREFTA---MGGYL 379
N ER++DDFVFL F +GNDFLPH+ ++ + ++ + YR T YL
Sbjct: 305 VVQSRNVERLIDDFVFLTFLLGNDFLPHLVCADLDDDGLDAIFSAYREAITREDLKTQYL 364
Query: 380 TDAGEVLLD 388
DA + ++
Sbjct: 365 VDAEKATVN 373
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/178 (38%), Positives = 94/178 (52%), Gaps = 14/178 (7%)
Query: 444 VKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPY 503
V +G+ + YY KFE +D+V +V +Y+EGL W YYYQ V SW WFYP+
Sbjct: 971 VGVGDISTVDDYYRVKFEDVEGHPVDRVV--LVKEYLEGLLWTLNYYYQGVASWSWFYPH 1028
Query: 504 HYAPFASDLKDLSD-LEITFFLGE--PFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSP 560
+ AP +D+ D L F E P PF QL+ LPA SS LP R L D
Sbjct: 1029 YAAPLPTDVLAACDVLPSIAFDAETTPLLPFQQLLTVLPAESSQLLPPSLRPLPLD---Q 1085
Query: 561 IYKFYPPDFQI--DMNGKRFAWQGVVKLPFID-EKLLLRQTKKLEVF-LTEEELFRNS 614
+ +FYP ++ D+ G+ W+ +V +P ID EKL T+ + L++EE RNS
Sbjct: 1086 LKEFYPSEYPCVPDVRGRE--WRDIVVIPVIDGEKLHSAYTRAIAAAPLSDEETARNS 1141
>gi|407040580|gb|EKE40208.1| 5'-3' exonuclease domain containing protein [Entamoeba nuttalli
P19]
Length = 628
Score = 247 bits (631), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 198/673 (29%), Positives = 305/673 (45%), Gaps = 140/673 (20%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP+ YRWL P E +D+++ NPNG EFDNLY+D+NG+I
Sbjct: 1 MGVPSLYRWLCKTVPNLSRKAKEH----------FDIDLTRNNPNGREFDNLYIDVNGLI 50
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
H + ++V + I + + I ++VRPR LLY+AIDGV P AKM QQR RRF
Sbjct: 51 HSSIDKQ------TIEEVIEHIQNQLMRIIMIVRPRNLLYIAIDGVCPIAKMIQQRKRRF 104
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQ 180
+ + N ITPGT+ M +S ++ FI
Sbjct: 105 TT-------------------------------DCLEGNAITPGTELMEKISVGIESFIL 133
Query: 181 ARLNQ--IPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
++N + W+ KVI+S +VPGEGEHKI+ YIR Q + N H +YG DADL+
Sbjct: 134 NQMNNKGLDYWRRIKVIVSGVHVPGEGEHKIIEYIRSQERI-----NESHVIYGEDADLL 188
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
+LSL H ILR+ + F K G PA NG + +
Sbjct: 189 LLSLVLHYDSIFILRK------DTRQIF-----------DKNKKGSKPAR-NGTGKSKVM 230
Query: 299 KKK------------------------------YQFLNIWVLREYL-----QYELDIPNP 323
K K ++F NI ++ + L QYE I
Sbjct: 231 KDKIKKVENEKIEKEKKELKKVFGSDDDEFLIPFEFANISLISKKLLELSSQYENSIERL 290
Query: 324 PFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHVYRREFTAMGGYLTDAG 383
+DF++L GNDFLP++ ++I GA+N ++++Y + + G +T+ G
Sbjct: 291 ELE-------NDFIYLMSIAGNDFLPNIEGIDIYAGALNTVLNIYF-QLHSKGIKITENG 342
Query: 384 EVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYEYNEAMKLNARRESSEELLQ-APVAVAD 442
+V + V F +A +E ++ + + + RR S++ + +
Sbjct: 343 KVNNNGVLAFFTELAQHEQRLIESQMK--------------TRRGSAQPICGFINIDTNK 388
Query: 443 TVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYP 502
T+KLG+ GYKERY F N EE KD V Y+EG+ WV YY + SW+W Y
Sbjct: 389 TIKLGQSGYKERYVQTYF--MNKEE---YIKDSVKSYLEGMNWVFNYYCGNAFSWKWGYK 443
Query: 503 YHYAPFASDLKD-LSDLEITFFLGE--PFRPFDQLMGTLPAASSSALPEKYRNLMTDPSS 559
HYAP D +E+T + P P +QL+ LP S +P++ + + P
Sbjct: 444 CHYAPLLCHFVDYFQPVELTTIAEDDGPIHPIEQLIAVLPPKSIHLIPKQLQEIYNLPE- 502
Query: 560 PIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDL 619
K P ID +G+ +++G+ + F D L+ + + L + E+ RN + ++
Sbjct: 503 -FKKTIPEHVIIDAHGQDVSYKGIALVGFPDISLIHQYVEDHIKELNKLEVIRNQLSQEV 561
Query: 620 LYVHPQHPLYQQI 632
L+V+ + P + I
Sbjct: 562 LFVYNKIPNFSTI 574
>gi|67466759|ref|XP_649521.1| 5'-3' exonuclease domain containing protein [Entamoeba histolytica
HM-1:IMSS]
gi|56465985|gb|EAL44135.1| 5'-3' exonuclease domain containing protein [Entamoeba histolytica
HM-1:IMSS]
gi|449704666|gb|EMD44867.1| 5'3' exonuclease domain containing protein [Entamoeba histolytica
KU27]
Length = 628
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 200/674 (29%), Positives = 307/674 (45%), Gaps = 142/674 (21%)
Query: 1 MGVPAFYRWLADRYP-LSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGI 59
MGVP+ YRWL P LS + Q D +D+++ NPNG EFDNLY+D+NG+
Sbjct: 1 MGVPSLYRWLCKTVPNLS----RKAKEQFD-------IDLTRNNPNGREFDNLYIDVNGL 49
Query: 60 IHPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRR 119
IH + ++V + I + + I ++VRPR LLY+AIDGV P AKM QQR RR
Sbjct: 50 IHSSIDKQ------TIEEVIEHIQNQLMRIIMIVRPRNLLYIAIDGVCPIAKMIQQRKRR 103
Query: 120 FRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFI 179
F + + N ITPGT+ M +S ++ FI
Sbjct: 104 FTT-------------------------------DCLEGNAITPGTELMEKISVGIESFI 132
Query: 180 QARLNQ--IPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADL 237
++N + W+ KVI+S +VPGEGEHKI+ YIR Q + N H +YG DADL
Sbjct: 133 LNQMNNKGLDYWRRIKVIVSGVHVPGEGEHKIIEYIRSQERI-----NESHVIYGEDADL 187
Query: 238 IMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPI 297
++LSL H ILR+ + F K G PA NG + +
Sbjct: 188 LLLSLVLHYDSIFILRK------DTRQIF-----------DKNKKGSKPAR-NGTGKSKV 229
Query: 298 HKKK------------------------------YQFLNIWVLREYL-----QYELDIPN 322
K K ++F NI ++ + L QYE I
Sbjct: 230 MKDKIKKVENEKIEKEKKELKKVFGSDDDEFLIPFEFANISLISKKLLELSSQYENSIER 289
Query: 323 PPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHVYRREFTAMGGYLTDA 382
+DF++L GNDFLP++ ++I GA+N ++++Y + + G +T+
Sbjct: 290 LELE-------NDFIYLMSIAGNDFLPNIEGIDIYAGALNTVLNIYF-QLHSKGIKITEN 341
Query: 383 GEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYEYNEAMKLNARRESSEELLQ-APVAVA 441
G+V + V F +A +E ++ + + + RR S++ + +
Sbjct: 342 GKVNNNGVLAFFTELAQHEQRLIESQMK--------------TRRGSAQPICGFINIDTN 387
Query: 442 DTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFY 501
+KLG+ GYKERY F N EE KD V Y+EG+ WV YY + SW+W Y
Sbjct: 388 KIIKLGQSGYKERYVQTYF--MNKEE---YIKDSVKSYLEGMNWVFNYYCGNAFSWKWGY 442
Query: 502 PYHYAPFASDLKD-LSDLEITFFLGE--PFRPFDQLMGTLPAASSSALPEKYRNLMTDPS 558
HYAP D +E T + P P +QL+ LP S +P++ + + P
Sbjct: 443 KCHYAPLLCHFVDYFQPVEFTTIAEDDGPIHPIEQLIAVLPPKSIHLIPKQLQEIYNLPE 502
Query: 559 SPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLD 618
K P ID +G+ +++G+ + F D L+ + + L + E+ RN + +
Sbjct: 503 --FKKTIPEQVIIDAHGQDVSYKGIALVGFPDISLIHQYVESHIKELNKLEVIRNQLSQE 560
Query: 619 LLYVHPQHPLYQQI 632
+L+V+ + P + I
Sbjct: 561 VLFVYNKIPNFSTI 574
>gi|303285348|ref|XP_003061964.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226456375|gb|EEH53676.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 252
Score = 246 bits (628), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 140/287 (48%), Positives = 173/287 (60%), Gaps = 40/287 (13%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP FYRWL++RYPL G G P+ DNLYLDMNG+I
Sbjct: 1 MGVPKFYRWLSERYPLL--------NHTCGAGTV-PI-----------IDNLYLDMNGVI 40
Query: 61 HPCFHPDGKPAPT--SYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C H G T + D++ +F Y+DHIF +VRPR+LLY+AIDGVAPRAKMNQQR+R
Sbjct: 41 HNCSHGAGTDINTRMTEDEMMAKVFAYLDHIFRMVRPRRLLYMAIDGVAPRAKMNQQRSR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RFR+A +A +A+ EE + E E +G E DSN ITPGT FMA LS L+++
Sbjct: 101 RFRSALEAKKAK-EEAIAKGEPEPSG---------EPFDSNCITPGTPFMARLSEHLRFY 150
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
+ + + P WQ VILS V GEGEHKIM +IR R PG+DPN HCLYGLDADLI
Sbjct: 151 VMKKQTEDPQWQKATVILSGHEVRGEGEHKIMEHIRWARGEPGWDPNQTHCLYGLDADLI 210
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDN 285
ML+L THE HF +LREV+ G G+ G + E P D+
Sbjct: 211 MLALVTHEPHFCLLREVVKFGG--------GERGQPSREVMQNPTDD 249
>gi|310831294|ref|YP_003969937.1| putative 5'-3' exonuclease [Cafeteria roenbergensis virus BV-PW1]
gi|309386478|gb|ADO67338.1| putative 5'-3' exonuclease [Cafeteria roenbergensis virus BV-PW1]
Length = 562
Score = 246 bits (627), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 192/646 (29%), Positives = 309/646 (47%), Gaps = 111/646 (17%)
Query: 1 MGVPAFYRWLADRYPLS-IVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGI 59
MGVP F+ WL Y + V+ + E + D F L LD N +
Sbjct: 1 MGVPGFFLWLMKNYKKNKFVNNINEFNKTD-------------------FKWLCLDANCL 41
Query: 60 IHP-CF-----HPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMN 113
IHP CF +PD K + + + +YI+ + LLV+P + LY+A+DGVAP AK+
Sbjct: 42 IHPKCFEVLAENPDFKNLNSLENKMISRCLEYIEKLVLLVKPTEGLYIAVDGVAPVAKIK 101
Query: 114 QQRTRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSA 173
QQR+RRF++ D A + RL+ + K + +++ ITPGT FM ++
Sbjct: 102 QQRSRRFKSVSDNALYD----RLKDKHNIP--------KNKFWNNSSITPGTDFMMKITK 149
Query: 174 ALQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIR-LQRNLPGFDPNTRHCLYG 232
++ + Q K+I S N PGEGEHKI+ +IR Q N + + +YG
Sbjct: 150 YIKEWATK--------QSYKIIFSSGNTPGEGEHKILDFIRQRQINYTNELNSGPYVIYG 201
Query: 233 LDADLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGV 292
LDADLI LS+A + ++RE A + GD
Sbjct: 202 LDADLIFLSIALNRNDVYLMRE--------------------AEHLNKGKGD-------- 233
Query: 293 DDTPIHKKKYQFLNIWVLREYLQYEL--DIPNPPFPINFERIVDDFVFLCFFVGNDFLPH 350
Q +++ V++E + Y + + ++++DF+F+C+F+GNDFLPH
Sbjct: 234 --------ILQLIDLEVMKESINYTMLQMLEGVEIKPTKTQLINDFIFICYFLGNDFLPH 285
Query: 351 MPTLEIREGAINLLMHVYRREFTAMGGYL------TDAGEVLLDR--VEKFIQSVAVYED 402
+L+I + + +L+ Y T + + + V ++ + +FI+ +A E+
Sbjct: 286 YQSLDIYDDGLPILLKTYA---TVISNTILPILKIQNNSTVQFNQKTLIEFIKLLAEQEE 342
Query: 403 QIFQKRTRIQQAYEYNEAMKLNARRESSEELLQAPVAVADTVKLGE---PGYKERYYADK 459
I K I + + Y ++ + + + + D V+LGE Y +RYY
Sbjct: 343 DILLK---ISKKHIYKPRLEGTDYEKEVKRIEWLRFKINDPVRLGEGTFDDYSKRYYEHY 399
Query: 460 FEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDL-KDLSDL 518
F SN E I K+ +Y++GL WV YY+ V SW ++YPY APF DL K ++ L
Sbjct: 400 FYGSNNENIIKI----CYEYIKGLTWVTNYYFYGVPSWDYYYPYDQAPFLKDLSKVINLL 455
Query: 519 EITFF---LGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNG 575
++T F G P +P +QL+ +P S LP K + L + SP+ YP DF+ D
Sbjct: 456 DMTHFKFKKGTPLKPLEQLLAVMPPQSKYLLPTKVQRLFNE-ESPLGHLYPIDFKQDFIH 514
Query: 576 KRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLY 621
KR WQG+ LPF++ + ++ K+E LT ++L +N V + +Y
Sbjct: 515 KRKYWQGIPLLPFLEIDTIQKEFSKIEKTLTPKDLHKNRVDKEFIY 560
>gi|312075567|ref|XP_003140474.1| single-stranded RNA 5'-3' exonuclease [Loa loa]
gi|307764361|gb|EFO23595.1| single-stranded RNA 5'-3' exonuclease [Loa loa]
Length = 258
Score = 245 bits (626), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 128/264 (48%), Positives = 169/264 (64%), Gaps = 32/264 (12%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP FYRW+++RYP + V +D Q+ EFDNLYLDMNGII
Sbjct: 1 MGVPKFYRWISERYPC--LSEVVQDEQIP------------------EFDNLYLDMNGII 40
Query: 61 HPCFHPDGKPAP--TSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C HPD + S +++F+ IF+YI+ +F +++PRK+ ++A+DGVAPRAKMNQQR R
Sbjct: 41 HSCSHPDDEDVSFRISEEEIFRDIFNYINFLFGIIKPRKVFFMAVDGVAPRAKMNQQRAR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RF +AK+A EA + K + K+ EKP DSN ITPGT FMA L LQYF
Sbjct: 101 RFMSAKNAQEA------MNKARKNGVKI--PDEKP--FDSNCITPGTHFMARLHEQLQYF 150
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
+Q ++ WQ ++ LS N PGEGEHKIM +IR +R+ +D NTRHCLYGLDADLI
Sbjct: 151 VQMKITTDSCWQGLRIYLSGHNCPGEGEHKIMDFIRSERSRSDYDANTRHCLYGLDADLI 210
Query: 239 MLSLATHEIHFSILREVITLPGQQ 262
ML + +HE HF++LRE + Q+
Sbjct: 211 MLGICSHEPHFALLREEVKFGRQR 234
>gi|167379332|ref|XP_001735097.1| 5'->3' exoribonuclease [Entamoeba dispar SAW760]
gi|165903060|gb|EDR28720.1| 5'->3' exoribonuclease, putative [Entamoeba dispar SAW760]
Length = 628
Score = 245 bits (626), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 197/656 (30%), Positives = 305/656 (46%), Gaps = 106/656 (16%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP+ YRWL P +E +D+++ NPNG EFDNLY+D+NG+I
Sbjct: 1 MGVPSLYRWLCKTVPNLSRRAIEH----------FDIDLTRNNPNGREFDNLYIDVNGLI 50
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
H + ++V + I + + I ++VRPR LLY+AIDGV P AKM QQR RRF
Sbjct: 51 HNSIDKQ------TIEEVIEHIQNQLMRIIMIVRPRNLLYIAIDGVCPIAKMIQQRKRRF 104
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQ 180
+ + N ITPGT+ M +S ++ FI
Sbjct: 105 TT-------------------------------DCLEGNAITPGTELMEKISTGIESFIL 133
Query: 181 ARLNQ--IPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
++N + W+ KVI+S +VPGEGEHKI+ YIR Q N H +YG DADL+
Sbjct: 134 NQMNNKGLDYWRRVKVIVSGVHVPGEGEHKIIEYIRSQER-----TNESHVIYGEDADLL 188
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECH-GKPGDNPADWNGVDDTPI 297
+LSL H ILR+ + F + G A GK +++ +
Sbjct: 189 LLSLVLHYDSIFILRK------DTRQIFDKSKKGSKPARNGIGKSKVIKDKIKKIENEKV 242
Query: 298 HKKK-----------------YQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLC 340
K+K ++F NI ++ + L EL PI + +DF++L
Sbjct: 243 AKEKKELKKVFGSDDDEFLIPFEFANISLISKRLS-ELS-SQYGNPIERLELENDFIYLM 300
Query: 341 FFVGNDFLPHMPTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVY 400
GNDFLP++ ++I GA+N ++ Y + + G +T+ G+V + V F + Y
Sbjct: 301 SIAGNDFLPNIEGIDIYAGALNTVLSTYF-QLHSKGIKITENGKVNNNGVHTFFIELVQY 359
Query: 401 EDQIFQKRTRIQQAYEYNEAMKLNARRESSEELLQ-APVAVADTVKLGEPGYKERYYADK 459
E ++ + + + RR S++ + + T+KLG+ GYKERY
Sbjct: 360 EQKLIENQMK--------------TRRGSAQPICGFVNIDTNKTIKLGQSGYKERYVQTY 405
Query: 460 FEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKD-LSDL 518
F N EE KD V Y+EG+ WV YY + SW+W Y HYAP D +
Sbjct: 406 F--MNKEE---YIKDTVKSYLEGMNWVFNYYCGNTFSWKWGYKPHYAPLLCHFVDYFQPI 460
Query: 519 EITFFLGE--PFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGK 576
E+T + P P +QL+ LP S +P+ + + P K P ID++G+
Sbjct: 461 EVTTIAEDDGPVHPIEQLIAVLPPKSIHLIPKPLQAIYNLPE--FKKTIPEHVIIDVHGQ 518
Query: 577 RFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVHPQHPLYQQI 632
+++G + F D L+ + ++ L + EL RN + ++L+V+ + P + I
Sbjct: 519 DVSYKGTPLVGFPDISLIHQYVEEHIKELNKLELIRNQLSQEVLFVYYKIPNFNTI 574
>gi|71030174|ref|XP_764729.1| hypothetical protein [Theileria parva strain Muguga]
gi|68351685|gb|EAN32446.1| hypothetical protein TP02_0165 [Theileria parva]
Length = 1726
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 193/607 (31%), Positives = 266/607 (43%), Gaps = 167/607 (27%)
Query: 44 PNGMEFDNLYLDMNGIIHPCFHP--DGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYL 101
P+G FDNLYLD+NGI+H C H D T DD+F SIF I I +VRPRKLLYL
Sbjct: 101 PDG--FDNLYLDVNGIVHNCSHSVVDLCQNITCEDDIFVSIFQCIIKIVNIVRPRKLLYL 158
Query: 102 AIDGVAPRAKMNQQRTRRFRAAKDAAEA--------------EAEEERLRKEFEEAGKL- 146
A+DGVAPRAK+ QQR RRFRAA ++ + E L+ E +E+ +
Sbjct: 159 AVDGVAPRAKIIQQRERRFRAALESTQQLIISQSLKSTNTHLEPSLHNLQCEPDESVQCE 218
Query: 147 --LSAKEKPE-TCDSNVITPGTQFMAVLSAALQYFIQARLNQIPGWQFTKVILSDANVPG 203
S ++K E D ITPGT FM L+ LQ+F +N+ W+ K+++S ++VPG
Sbjct: 219 PDESVRDKEEFKFDPIQITPGTAFMERLTVRLQFFALKMINENEQWRNLKIVVSGSDVPG 278
Query: 204 EGEHKIMSYIR---LQRNLPGFDPNTR---------------------HCLYGLDADLIM 239
EGEHKIM YIR R+ P T+ HC+YGLDADLI+
Sbjct: 279 EGEHKIMEYIRNNKAHRHSQFHHPRTQLDNRNNTTQLDSVSGERNCVSHCVYGLDADLIV 338
Query: 240 LSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIHK 299
LSLATHE + +LRE + GH+ + ++
Sbjct: 339 LSLATHEPYICLLREQVVF-------------GHMKNSSKLR-------------MMVNM 372
Query: 300 KKYQFLNIWVLREYLQYELDIPNPPF---PINFERIVDDFVFLCFFVGNDFLPHMPTLEI 356
Y L++ +LREYL +L + +P P +R+VDDFVFL FVGNDFLPH+ I
Sbjct: 373 NSYILLHVGILREYLVTDL-VEDPRLRSDPSVIDRVVDDFVFLTMFVGNDFLPHLLMASI 431
Query: 357 REGAINLLMHVYRREFT--------------------AMGGYLTDA-GEVLLDRVEKFIQ 395
+G N + +YR + +LT GEV D + F+
Sbjct: 432 PDGGFNHTLQIYREYLSESLRKHNLHSKHNLHNSHSEKRDVWLTSGCGEVNYDNLVLFMT 491
Query: 396 SVAVYEDQIFQK-------RTRIQQAYEYNEAMKLNARR-----------ESSEELLQAP 437
A YE++ Q +T ++ + N+ R S +
Sbjct: 492 RWARYENRTLQNNLTAELDKTTFNPQNNTSKVVNFNSNRVSNFNSNRVSNHSDSAKSKCS 551
Query: 438 VAVADTVKL--------------GEPG----YKERYYADKFEISNP-------------- 465
+ V D GEP Y+ RYY K ISN
Sbjct: 552 ITVIDVRNSRIETDLSDFSSKYPGEPRTLAEYRNRYYLAKLGISNQLVKCQRSTNSTNSV 611
Query: 466 ------------------EEIDKVK--KDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHY 505
++ V +DVV +Y+ G+ W+ YYY+ V SW WF P Y
Sbjct: 612 NSVISLNSVISLNSVNSLNSVNTVNTVEDVVREYLHGIQWILYYYYRGVPSWNWFLPCKY 671
Query: 506 APFASDL 512
PF +D+
Sbjct: 672 PPFVNDI 678
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 46/80 (57%)
Query: 518 LEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKR 577
L ITF G P P++QLM LP S+ LP + L+TD SP++++YP F +DM+
Sbjct: 754 LRITFVRGRPITPYEQLMLVLPPQSAHFLPSVFSKLITDQDSPLHQYYPLHFDVDMDNTN 813
Query: 578 FAWQGVVKLPFIDEKLLLRQ 597
W G+ +P + LLL+
Sbjct: 814 VPWGGITLIPHVPYPLLLQH 833
>gi|123469088|ref|XP_001317758.1| XRN 5'-3' exonuclease N-terminus family protein [Trichomonas
vaginalis G3]
gi|121900500|gb|EAY05535.1| XRN 5'-3' exonuclease N-terminus family protein [Trichomonas
vaginalis G3]
Length = 1020
Score = 242 bits (617), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 174/594 (29%), Positives = 268/594 (45%), Gaps = 110/594 (18%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP FYRW+ RYPL V DP ARP + D Y+D N II
Sbjct: 1 MGVPGFYRWVTQRYPL--VRRRMNDP-------ARP-----------KIDYFYIDFNCII 40
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
+ + + +F + Y+D + +++P+ +L++++DG AP AK QQR+RRF
Sbjct: 41 YNALRSISMSSGGTILQLFNEVCRYLDVLVQVIKPQIVLFISVDGPAPFAKCTQQRSRRF 100
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQ 180
AA+D+ A ++ I+ GT FM L L + +
Sbjct: 101 VAARDSVGA-------------------------AFNTTAISVGTTFMEDLHQHLLEYFK 135
Query: 181 ARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
++N W ++I S PGEGEHK +YIR R +DPN+ HC+Y DADLI L
Sbjct: 136 RKVNSDRAWSTPQLIYSSHRTPGEGEHKFFNYIREIRKTADYDPNSTHCIYSPDADLIFL 195
Query: 241 SLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIHKK 300
+L + E + I+RE G E VG+ G G DD
Sbjct: 196 ALQSKEKYIYIMREWDAWVGPNE------NVGN---------GKLAKLKTGADD------ 234
Query: 301 KYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGA 360
++ L++ +L+EYL Y D P P +VDDF F +GNDF+PH P + I+ G
Sbjct: 235 -FELLHLPILKEYLSY--DFPGIP----LSNLVDDFAGFSFLIGNDFIPHFPDVIIQHGD 287
Query: 361 INLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYEYNEA 420
+ ++ Y++ YL G+ ++ F++SV + +++ Q+ E ++
Sbjct: 288 FDQVVIAYQKSLLETKQYLIVDGKFNKPALQIFLRSVV----HQLKNKSKKQEKAEQDKQ 343
Query: 421 MKLNARRESSEELLQAPVAVADTVKLGEPGYKERYYADKFEISNPEEIDK---VKKDVVL 477
M+ + +K E+Y PEE + +K +
Sbjct: 344 MQ-------------------NYLKTARTYISEKY---------PEETKRDPEFEKKLSF 375
Query: 478 KYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKD-LSDLEITFFLGEPFRPFDQLMG 536
++ WV YY + SW W + Y YAP + + + + F L P PF+QL+
Sbjct: 376 SVLDSFDWVLEYYTEGCPSWTWCFQYFYAPPLIIVSEYVLEHSSHFELSRPPLPFEQLLC 435
Query: 537 TLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFID 590
LP S++ LP +LM P SPI +YP F ID+NG+ +GVV +PF+D
Sbjct: 436 ILPPQSANLLPSALSSLMFSP-SPISSYYPTSFSIDLNGRAVEHEGVVLIPFVD 488
>gi|123410059|ref|XP_001303596.1| XRN 5'-3' exonuclease N-terminus family protein [Trichomonas
vaginalis G3]
gi|121884988|gb|EAX90666.1| XRN 5'-3' exonuclease N-terminus family protein [Trichomonas
vaginalis G3]
Length = 1018
Score = 241 bits (616), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 181/618 (29%), Positives = 270/618 (43%), Gaps = 108/618 (17%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP FYRW+ RYP+ V DP +RP+ + LY+DMNGI
Sbjct: 1 MGVPGFYRWMVQRYPM--VRRKMADP-------SRPI-----------INRLYIDMNGIF 40
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
+ G + IF Y D + + RP L+++A+DG AP AK +QQR+RR+
Sbjct: 41 YKALAATGTGNEDLTPALKAEIFRYTDMLVQICRPTDLIFIAVDGPAPNAKASQQRSRRY 100
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQ 180
AA+D + + D I+PGT FM L+ AL FI+
Sbjct: 101 LAARDHSM-------------------------NSFDRTQISPGTVFMDKLNDALMEFIK 135
Query: 181 ARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
+ + W +VI S + V GEGEHKI+ +IR R + +DP+ HCLY DADLI L
Sbjct: 136 DKREKDRTWSRPRVIYSSSFVAGEGEHKILDFIREGRAISDWDPDLVHCLYSTDADLIFL 195
Query: 241 SLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIHKK 300
L THE + +LRE Q+ + K ++
Sbjct: 196 GLQTHEKNILLLREADAANFQKS-----------LSPFEAKTAITNYSFDA--------- 235
Query: 301 KYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGA 360
++ ++ +LREYL + E+++DDF+ + F +GNDF+P ++IR G
Sbjct: 236 -FELIHFPLLREYLLLDFGCGID----EIEKVIDDFIAISFLIGNDFIPSFTDIDIRSGD 290
Query: 361 INLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYEYNEA 420
N ++ YR+ ++ G ++ F+ V + +Q Y
Sbjct: 291 YNDVIDQYRKFRDETKSHIVVDGNFDFQNLKIFLSMVV----------DKCRQNY----- 335
Query: 421 MKLNARRESSEELLQAPVAVADTVKLGEPGYKERYYADKFEISNPEEIDK----VKKDVV 476
+ E EE L +D Y E Y PEE K + +++
Sbjct: 336 ---GIKNEIPEEEL------SDKFSEANKSYLESKY--------PEESQKDYLGLCREMS 378
Query: 477 LKYVEGLCWVCRYYYQDVCSWQWFYPYHYA-PFASDLKDLSDLEITFFLGEPFRPFDQLM 535
++ WV RYY SW W YPY YA P + + + + F G+P PF Q +
Sbjct: 379 KSILDAFYWVLRYYNSGCISWTWSYPYLYAPPLEVVIPFIDEYKPEFETGKPNLPFLQQL 438
Query: 536 GTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLL 595
P S+ +PE NLM P SPI KFYP F+ D+NGK+ + VV LP +D +
Sbjct: 439 SIFPPQSAHLMPEPLANLMKAP-SPIAKFYPEKFETDLNGKKAEYHAVVVLPILDYAAIQ 497
Query: 596 RQTKKLEVFLTEEELFRN 613
+ + + E+L RN
Sbjct: 498 EAYESVISQVDAEDLKRN 515
>gi|348581618|ref|XP_003476574.1| PREDICTED: 5'-3' exoribonuclease 1-like [Cavia porcellus]
Length = 1639
Score = 240 bits (613), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 125/264 (47%), Positives = 169/264 (64%), Gaps = 32/264 (12%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP FYRW+++RYP + +VV+E Q+ EFDNLYLDMNGII
Sbjct: 1 MGVPKFYRWISERYPC-LSEVVKEH-QIP------------------EFDNLYLDMNGII 40
Query: 61 HPCFHPDGKPAP--TSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C HP+ S D +F IF Y++ +F +++PRK+ ++A+DGVAPRAKMNQQR R
Sbjct: 41 HQCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RFR+AK+A E++++K E+ G+ L + + DSN ITPGT+FMA L L+YF
Sbjct: 101 RFRSAKEA------EDKIKKAVEK-GETLPTEAR---FDSNCITPGTEFMARLHEHLKYF 150
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
+ +++ WQ + S PGEGEHKIM +IR ++ DPNTRHCLYGLDADLI
Sbjct: 151 VNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKQDHDPNTRHCLYGLDADLI 210
Query: 239 MLSLATHEIHFSILREVITLPGQQ 262
ML L +HE HFS+LRE + G++
Sbjct: 211 MLGLTSHEAHFSLLREEVRFGGKK 234
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 80/163 (49%), Positives = 105/163 (64%), Gaps = 2/163 (1%)
Query: 451 YKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFAS 510
YK YY K + D D + YV+ + W+ YYY V SW WFYPYHYAPF S
Sbjct: 342 YKRTYYMTKMGVDVVS--DDFLADQAVCYVQAIQWILHYYYHGVQSWSWFYPYHYAPFLS 399
Query: 511 DLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQ 570
D++++S L+I F LG+PF+PF+QL+ LPAAS + LP Y++LMT SPI ++YPPDF+
Sbjct: 400 DIRNISTLKIHFELGKPFKPFEQLLAVLPAASKNLLPVCYQHLMTSEDSPIIEYYPPDFK 459
Query: 571 IDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRN 613
D+NGK+ W+ VV +PFIDEK LL + L EEE RN
Sbjct: 460 TDLNGKQQEWEAVVLIPFIDEKRLLEAMEACNHSLKEEERKRN 502
>gi|62701868|gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group]
gi|77548751|gb|ABA91548.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 2340
Score = 238 bits (607), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 119/233 (51%), Positives = 154/233 (66%), Gaps = 10/233 (4%)
Query: 194 VILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIMLSLATHEIHFSILR 253
VILSDANVPGEGEHKIMS+IR QR G+DPNTRHCLYGLDADLIML+LA+HE+HFSILR
Sbjct: 1535 VILSDANVPGEGEHKIMSFIRAQRGREGYDPNTRHCLYGLDADLIMLALASHEVHFSILR 1594
Query: 254 EVITLPGQQEKCFVCGQVGHLAAECHGKPGDN--PADWNGVDDTPIHKKKYQFLNIWVLR 311
E + QE + E P + + KK YQFLNIWVLR
Sbjct: 1595 EEVLHQNNQENTIPITPKTFTSQEAEKFKCRAWFPRITEARPEGKLTKKPYQFLNIWVLR 1654
Query: 312 EYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHVYRRE 371
EYL+ ++ IPNP ++ ER++DDFVF+CF GNDF+PH+P+LEI EGAI+LL+ VY+
Sbjct: 1655 EYLELDMKIPNPIQTLDVERMIDDFVFICFLTGNDFIPHIPSLEIHEGAIDLLIEVYKTS 1714
Query: 372 FTAMGGYLTDAGEV--------LLDRVEKFIQSVAVYEDQIFQKRTRIQQAYE 416
F MGGY+ D +V + R+EKF +++YE++IF K + + +E
Sbjct: 1715 FNKMGGYIVDTDKVKDKHAAYLKVSRLEKFFHELSLYEEKIFLKCYDLARGFE 1767
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 100/200 (50%), Positives = 126/200 (63%), Gaps = 20/200 (10%)
Query: 1 MGVPAFYRWLADRYP--LSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNG 58
MGVP+FYRWL +YP +S + ++D G A P + NLYLDMNG
Sbjct: 1 MGVPSFYRWLVGKYPAIVSPANDDDDDVGSSSNGAAAPP----------VYHNLYLDMNG 50
Query: 59 IIHPCFHPDGK-----PAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMN 113
IIHPCFHP + P PT+ ++VF S+FDY+D + +VRP LLYLA+DGVAPRAKMN
Sbjct: 51 IIHPCFHPQDQVCPPSPVPTTLEEVFHSMFDYMDRLIRIVRPTSLLYLAVDGVAPRAKMN 110
Query: 114 QQRTRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKE---KPETCDSNVITPGTQFMAV 170
QQR RRF++A A +AE EE LR F GK + +E E D NVIT GT+FM
Sbjct: 111 QQRARRFKSAMAAKQAEVEENILRDRFRAEGKKVLPRETSSSSEVSDPNVITLGTEFMDK 170
Query: 171 LSAALQYFIQARLNQIPGWQ 190
LS AL+Y+I+ARLN P W+
Sbjct: 171 LSDALKYYIRARLNSDPLWK 190
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 81/217 (37%), Positives = 116/217 (53%), Gaps = 42/217 (19%)
Query: 429 SSEELLQAPVAVADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVL----------- 477
+ ++L++ D +KLG PG+K R++ +KF+ +EI K++ ++V
Sbjct: 1884 NKQDLIKTGACKHDKIKLGSPGWKSRFFKEKFDAETKDEIAKLQNEMVTISCFLNYANGI 1943
Query: 478 ------KYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDLEITFFLGEPFRPF 531
KY+EGLCWV YY+ DV SW W+YP++YAPFASD++ LS R F
Sbjct: 1944 LYLTVQKYLEGLCWVLCYYFADVPSWSWYYPFYYAPFASDVRGLS------------RSF 1991
Query: 532 DQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDE 591
ALP Y LM S I FYP + ID +GKR+ WQG+ KLPFI++
Sbjct: 1992 -------------ALPGCYSKLMDCDESAIQAFYPSELDIDTDGKRYLWQGIAKLPFIED 2038
Query: 592 KLLLRQTKKLEVFLTEEELFRNSVMLDLLYVHPQHPL 628
KLLL TK E L EL RN+V + +++ + L
Sbjct: 2039 KLLLSVTKTAEKDLAVHELRRNTVRQEKIFLRNSNAL 2075
>gi|297611272|ref|NP_001065797.2| Os11g0157000 [Oryza sativa Japonica Group]
gi|255679807|dbj|BAF27642.2| Os11g0157000 [Oryza sativa Japonica Group]
Length = 1601
Score = 238 bits (607), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 120/238 (50%), Positives = 155/238 (65%), Gaps = 20/238 (8%)
Query: 194 VILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIMLSLATHEIHFSILR 253
VILSDANVPGEGEHKIMS+IR QR G+DPNTRHCLYGLDADLIML+LA+HE+HFSILR
Sbjct: 824 VILSDANVPGEGEHKIMSFIRAQRGREGYDPNTRHCLYGLDADLIMLALASHEVHFSILR 883
Query: 254 EVITLPGQQE-------KCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIHKKKYQFLN 306
E + QE K F + P + + KK YQFLN
Sbjct: 884 EEVLHQNNQENTIPITPKTFTSQEAEKFKCRAWF-----PRITEARPEGKLTKKPYQFLN 938
Query: 307 IWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMH 366
IWVLREYL+ ++ IPNP ++ ER++DDFVF+CF GNDF+PH+P+LEI EGAI+LL+
Sbjct: 939 IWVLREYLELDMKIPNPIQTLDVERMIDDFVFICFLTGNDFIPHIPSLEIHEGAIDLLIE 998
Query: 367 VYRREFTAMGGYLTDAGEV--------LLDRVEKFIQSVAVYEDQIFQKRTRIQQAYE 416
VY+ F MGGY+ D +V + R+EKF +++YE++IF K + + +E
Sbjct: 999 VYKTSFNKMGGYIVDTDKVKDKHAAYLKVSRLEKFFHELSLYEEKIFLKCYDLARGFE 1056
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 89/200 (44%), Gaps = 53/200 (26%)
Query: 429 SSEELLQAPVAVADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCR 488
+ ++L++ D +KLG PG+K R++ +KF+ +EI K++ ++V
Sbjct: 1190 NKQDLIKTGACKHDKIKLGSPGWKSRFFKEKFDAETKDEIAKLQNEMVT----------- 1238
Query: 489 YYYQDVCSWQWFYPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPE 548
I+ FL + G L S ALP
Sbjct: 1239 -------------------------------ISCFL-------NYANGIL----SFALPG 1256
Query: 549 KYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEE 608
Y LM S I FYP + ID +GKR+ WQG+ KLPFI++KLLL TK E L
Sbjct: 1257 CYSKLMDCDESAIQAFYPSELDIDTDGKRYLWQGIAKLPFIEDKLLLSVTKTAEKDLAVH 1316
Query: 609 ELFRNSVMLDLLYVHPQHPL 628
EL RN+V + +++ + L
Sbjct: 1317 ELRRNTVRQEKIFLRNSNAL 1336
>gi|428182412|gb|EKX51273.1| hypothetical protein GUITHDRAFT_157234 [Guillardia theta CCMP2712]
Length = 252
Score = 238 bits (606), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 127/261 (48%), Positives = 166/261 (63%), Gaps = 41/261 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MG+P F+RWL++RYPL D+ G P EFDNLYLDMNGII
Sbjct: 1 MGIPKFFRWLSERYPLINQDI--------KAGTIFP-----------EFDNLYLDMNGII 41
Query: 61 HPCFHP-DGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRR 119
HPC H DG+ + +D+F +I ++D + +VRP++LL+LA+DG APRAKMNQQR RR
Sbjct: 42 HPCTHGNDGEVVRMTENDMFVAIGKFVDELMKVVRPQRLLFLAVDGCAPRAKMNQQRQRR 101
Query: 120 FRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETC-----DSNVITPGTQFMAVLSAA 174
FRAA + +++ L++A+E+ E DSN ITPGTQFMA L+
Sbjct: 102 FRAASELSKS----------------LMNARERGEEIPQDPFDSNCITPGTQFMARLTNF 145
Query: 175 LQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLD 234
L YFIQ+++ P W K+ILS A VPGEGEHKIM YIR +++ + N RHC++G D
Sbjct: 146 LNYFIQSKIKDDPIWAKAKIILSGAEVPGEGEHKIMEYIRREKSQESWPSNLRHCIFGND 205
Query: 235 ADLIMLSLATHEIHFSILREV 255
ADLIMLSLATHE HF++LRE
Sbjct: 206 ADLIMLSLATHEPHFALLRET 226
>gi|341882472|gb|EGT38407.1| hypothetical protein CAEBREN_28761, partial [Caenorhabditis
brenneri]
Length = 274
Score = 235 bits (600), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 135/320 (42%), Positives = 188/320 (58%), Gaps = 52/320 (16%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP FYRW ++RYP + +V+ E Q+ EFDNLYLDMNGII
Sbjct: 1 MGVPKFYRWTSERYP-CLSEVINE-SQIP------------------EFDNLYLDMNGII 40
Query: 61 HPCFHPDGKPAP--TSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C HP+ + +++F +IF YI++++ L+RP+K+ ++A+DGVAPRAKMNQQR R
Sbjct: 41 HNCSHPNDDDVTFRITEEEIFVNIFAYIENLYNLIRPQKVFFMAVDGVAPRAKMNQQRAR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RF +A+ A + +L K E+ G+++ +++ DSN ITPGT FM L L +
Sbjct: 101 RFMSARTA------QTQLDKAIEK-GEVIPTEKR---FDSNCITPGTYFMTRLHDQLDEW 150
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
I+ + WQ K+ILS NVPGEGEHKIM YIR +R +DPNTRHC+YGLDADLI
Sbjct: 151 IKKKSESDSHWQGRKIILSGHNVPGEGEHKIMDYIRTERAKSDYDPNTRHCMYGLDADLI 210
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
ML + +HE HFS+LRE +T + K + + KP +D
Sbjct: 211 MLGIVSHEPHFSLLREEVTFNTRPRK----------NEQKNKKPKRTDSD---------- 250
Query: 299 KKKYQFLNIWVLREYLQYEL 318
K + L++ +LREYL +E
Sbjct: 251 VKTFHLLHLSLLREYLAWEF 270
>gi|118388580|ref|XP_001027386.1| XRN 5'-3' exonuclease N-terminus family protein [Tetrahymena
thermophila]
gi|89309156|gb|EAS07144.1| XRN 5'-3' exonuclease N-terminus family protein [Tetrahymena
thermophila SB210]
Length = 1793
Score = 235 bits (599), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 149/425 (35%), Positives = 211/425 (49%), Gaps = 67/425 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP FY WLA RYPL + + + GE PN D YLDMNGII
Sbjct: 1 MGVPGFYSWLARRYPLILHQIKK------GEV-----------PN---IDCFYLDMNGII 40
Query: 61 HPCFHPDGKP-----APTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQ 115
+ C +G + ++F IF+YID + LV P+K+LYL +DG PRAK NQQ
Sbjct: 41 YKCSKDEGTVFKDLLLQRNIQEIFSMIFNYIDEMVNLVEPKKVLYLFLDGPCPRAKQNQQ 100
Query: 116 RTRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAAL 175
RTRRF++A+ + L G L ET +N I+ GT+FM L+ L
Sbjct: 101 RTRRFQSAQSWKD-------LNDSLRNCGFLSEG----ETMKNNSISTGTEFMHDLNKQL 149
Query: 176 QYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDA 235
++I + Q P W +V S +NVPGEGEHKI++++ + +DP T HC+YG DA
Sbjct: 150 HFYICKKFEQDPRWSNLEVFFSGSNVPGEGEHKIINFMHQYCSSQDYDPTTTHCIYGADA 209
Query: 236 DLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDT 295
DLIML L+TH + SILRE + P A + T
Sbjct: 210 DLIMLGLSTHIKYVSILREEMKFQP---------------------PVSRAAKRDRESVT 248
Query: 296 PIHKKKYQFLNIWVLREYLQYELDI---PNPPFPINFERIVDDFVFLCFFVGNDFLPHMP 352
+Q + + ++REY++ E + N ER++DDF+ +C F+GNDFLP +
Sbjct: 249 ------FQMIYLNIVREYMELEYKMLWKKVKKLEFNIERVIDDFLLICCFIGNDFLPRLY 302
Query: 353 TLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYE-DQIFQKRTRI 411
IREG +L+ +Y+ YL D G + +++ IQ +A E D I K T I
Sbjct: 303 CFNIREGQFEILIQIYKDYLVEADSYLNDNGHINWVGLQQIIQRIAEVELDFIGDKATDI 362
Query: 412 QQAYE 416
+ Y+
Sbjct: 363 TKEYK 367
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/131 (39%), Positives = 79/131 (60%), Gaps = 12/131 (9%)
Query: 475 VVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDL--------KDLSDLEITFFLGE 526
++ KY+EGL +V YYYQ SW W++P++YAP SD+ + LS EI F L E
Sbjct: 525 LITKYLEGLQFVLLYYYQGCPSWSWYFPFYYAPMTSDISLFLNYKAEHLSQ-EIVFDLSE 583
Query: 527 PFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYK---FYPPDFQIDMNGKRFAWQGV 583
P+ P QLM + +++ LP+ + L+TDP+S + +YP F ID G F+ + +
Sbjct: 584 PYPPMKQLMCIIHPENANLLPKPFAQLLTDPNSKLRSPVDYYPDKFTIDPYGGVFSHEYI 643
Query: 584 VKLPFIDEKLL 594
V LPF+D+KL+
Sbjct: 644 VVLPFMDQKLI 654
>gi|336472444|gb|EGO60604.1| hypothetical protein NEUTE1DRAFT_127448 [Neurospora tetrasperma
FGSC 2508]
gi|350294329|gb|EGZ75414.1| 5'-3' exoribonuclease 1 [Neurospora tetrasperma FGSC 2509]
Length = 1226
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 137/335 (40%), Positives = 188/335 (56%), Gaps = 59/335 (17%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP F+RWL++RYP +I ++ E+ EFD LYLDMNGII
Sbjct: 1 MGVPKFFRWLSERYP-AISQLIAEN-------------------RIPEFDCLYLDMNGII 40
Query: 61 HPCFHPDGKPAP--TSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C H D + +++F +IF+YI+H+F ++P+KL ++AIDGVAPRAKMNQQR R
Sbjct: 41 HNCTHKDTSDVQFRMTEEEMFIAIFNYIEHLFGKIKPKKLFFMAIDGVAPRAKMNQQRAR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RFR A D +A + R KE KE+P DSN ITPGT+FMA LS L+YF
Sbjct: 101 RFRTALDNEKARDKAIREGKEL--------PKEEP--FDSNCITPGTEFMAKLSQQLRYF 150
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
I ++++ WQ +++LS VPGEGEHKIM YIR R +D N RHCLYGLDADLI
Sbjct: 151 IHKKVSEDRDWQQPEIVLSGHEVPGEGEHKIMEYIRNARAQLDYDANVRHCLYGLDADLI 210
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
ML L +H+ HF +LRE +T F G H A +
Sbjct: 211 MLGLLSHDPHFCLLREEVT--------FGRGPAKHKA-------------------KGLE 243
Query: 299 KKKYQFLNIWVLREYLQYELDIPNPPFPINFERIV 333
++ + +++ ++REYL+ E P + ++ I+
Sbjct: 244 EQNFYLMHLCIVREYLELEFQDLKKPGAMIYKEIL 278
>gi|170119902|ref|XP_001891045.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164633808|gb|EDQ98306.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 345
Score = 233 bits (594), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 135/365 (36%), Positives = 195/365 (53%), Gaps = 54/365 (14%)
Query: 48 EFDNLYLDMNGIIHPC--FHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDG 105
EFDNLYLD NGIIH C + + + + +F IF Y+DH+F ++ +KL ++A+DG
Sbjct: 19 EFDNLYLDFNGIIHNCSRLNDEDTHFRLTEEQIFTLIFTYVDHLFGKIKLKKLFFVAVDG 78
Query: 106 VAPRAKMNQQRTRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGT 165
VAPRAKMNQQR+RRFR AK+A + +R++ E G+ L ++ DSN I P
Sbjct: 79 VAPRAKMNQQRSRRFRTAKEA-------KVVREKAELKGEKLPMEK---AFDSNCIAPVN 128
Query: 166 QFMAVLSAALQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPN 225
L+YFI ++++ W+ KV+LS VPGEGEHKIM YIRL R PG++PN
Sbjct: 129 TIYGTFIDQLRYFIHKKISEDSNWREVKVVLSGREVPGEGEHKIMEYIRLSRAQPGYNPN 188
Query: 226 TRHCLYGLDADLIMLSLATHEIHFSILREVITL-PGQQEKCFVCGQVGHLAAECHGKPGD 284
RHCLYGLDADLIML L +H+ H +LRE + P ++K
Sbjct: 189 IRHCLYGLDADLIMLGLLSHDPHLCLLREEVKFGPASRKK-------------------- 228
Query: 285 NPADWNGVDDTPIHKKKYQFLNIWVLREYLQYELDIPN--PPFPINFERIVDDFVFLCFF 342
WN T + + L++ ++REYL E PF N +R++D
Sbjct: 229 ----WN----TSLESVNFYLLHLSLMREYLDLEFHEIQLMLPFDYNLKRVID-------- 272
Query: 343 VGNDFLPHMPTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYED 402
DFLP +P L I E + L VY++ + GY + G + R++ + + +E
Sbjct: 273 ---DFLPDLPDLHIHENGLEKLFDVYKKVLPGLDGYTNEGGVINTKRLQVILDEMTPWEQ 329
Query: 403 QIFQK 407
+F+K
Sbjct: 330 GVFEK 334
>gi|242218321|ref|XP_002474952.1| predicted protein [Postia placenta Mad-698-R]
gi|220725867|gb|EED79836.1| predicted protein [Postia placenta Mad-698-R]
Length = 253
Score = 233 bits (594), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 117/220 (53%), Positives = 153/220 (69%), Gaps = 13/220 (5%)
Query: 48 EFDNLYLDMNGIIHPCFHPDGKPAP--TSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDG 105
EFDNLY+D NGIIH C HP+ A S + +F SIF Y+DH+F ++P+KL ++AIDG
Sbjct: 40 EFDNLYVDFNGIIHNCSHPNDGDAHFRLSEEQMFTSIFAYVDHLFGKIKPKKLFFMAIDG 99
Query: 106 VAPRAKMNQQRTRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGT 165
VAPRAKMNQQR+RRFR AK+A E +R++ E+ G+ L ++ DSN ITPGT
Sbjct: 100 VAPRAKMNQQRSRRFRTAKEARE-------IREKAEQKGEKLPDQK---AFDSNCITPGT 149
Query: 166 QFMAVLSAALQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPN 225
+FMA LS L+YFI ++++ W+ V+LS +VPGEGEHK+M YIRL R P +DPN
Sbjct: 150 EFMAKLSEQLRYFINKKISEDSNWRDITVVLSGHDVPGEGEHKVMEYIRLSRAQPDYDPN 209
Query: 226 TRHCLYGLDADLIMLSLATHEIHFSILREVITL-PGQQEK 264
RHCLYGLDADLIML L +H+ HF +LRE + P + K
Sbjct: 210 VRHCLYGLDADLIMLGLLSHDPHFCLLREEVKFGPASKSK 249
>gi|402582266|gb|EJW76212.1| hypothetical protein WUBG_12878 [Wuchereria bancrofti]
Length = 410
Score = 232 bits (591), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 121/236 (51%), Positives = 158/236 (66%), Gaps = 6/236 (2%)
Query: 193 KVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIMLSLATHEIHFSIL 252
KVILSDANVPGEGEHKIM +IR QR P DPNT HCL G DADLIML LATHE +F+I+
Sbjct: 5 KVILSDANVPGEGEHKIMDFIRRQRASPSHDPNTVHCLCGADADLIMLGLATHEPNFNII 64
Query: 253 REVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIHKK-KYQFLNIWVLR 311
RE +P QQ C +CGQ GH +C G D+ ++ +P+ K+ + F+ + VLR
Sbjct: 65 REEF-VPNQQRPCDLCGQYGHDLNDCKGLASDDNSE---CQSSPLQKETNFIFIRLPVLR 120
Query: 312 EYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHVYRRE 371
EYL+ EL IPN P + ER +DD+VF+CFFVGNDFLPH+P+LEIRE AI+ L+ +Y+
Sbjct: 121 EYLERELHIPNCSIPFDLERAIDDWVFMCFFVGNDFLPHLPSLEIRENAIDRLVKLYKDM 180
Query: 372 FTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRT-RIQQAYEYNEAMKLNAR 426
M G+LTD+G V ++RV+ + + ED+IF+ R R QQ N+ K R
Sbjct: 181 VCEMKGHLTDSGIVHIERVQIILDKLGEVEDEIFKSRQEREQQFKRRNKEKKWRER 236
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 34/51 (66%), Gaps = 2/51 (3%)
Query: 442 DTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQ 492
D V+L E G+K+RYY KF++ + + ++ V L YVEGLCWV YYYQ
Sbjct: 323 DEVRLWEDGWKDRYYKSKFQVDGKDIV--FRRKVALAYVEGLCWVLHYYYQ 371
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/31 (77%), Positives = 29/31 (93%)
Query: 82 IFDYIDHIFLLVRPRKLLYLAIDGVAPRAKM 112
IF+YID +F +VRPRKLLY+AIDGVAPRAK+
Sbjct: 374 IFEYIDRLFAIVRPRKLLYMAIDGVAPRAKV 404
>gi|291236957|ref|XP_002738405.1| PREDICTED: C. briggsae CBR-XRN-2 protein-like [Saccoglossus
kowalevskii]
Length = 1810
Score = 229 bits (585), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 168/543 (30%), Positives = 251/543 (46%), Gaps = 145/543 (26%)
Query: 67 DGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRFRAAKDA 126
DG P P S ++ F+ + +ID + +VRP+K+L++A++GV P AK N +R ++F K
Sbjct: 1045 DGWPLPISEEEKFEGMSKFIDTLMEIVRPKKMLFIAMEGVTPFAKNNNRRQKKFLNYKKD 1104
Query: 127 AEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQARLNQI 186
EAEA ER + +E G D N + PGT FM+ L L+ +I R
Sbjct: 1105 REAEAGIER--RSADEFG-----------FDYNSLCPGTDFMSRLHVHLRAYIADR---- 1147
Query: 187 PGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIMLSLATHE 246
IR Q G ++LS A+
Sbjct: 1148 --------------------------IRTQPRWVGIK--------------VILSDAS-- 1165
Query: 247 IHFSILREVITLPGQQEKCF---VCGQVGHLAAECHGKPGDNPADWNGVDDTPIHKKKYQ 303
+PG+ E + Q GH+ +C P + + ++K
Sbjct: 1166 -----------VPGEGEHKIMEIIRSQRGHIVRDCENAPRQ--------EREVVQEEKLI 1206
Query: 304 FLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGAINL 363
F+++ VLR+ R +DD+VFLC +GNDFLP +P+L I+EGA++
Sbjct: 1207 FVHLKVLRK------------------RTIDDWVFLCCLLGNDFLPKLPSLNIKEGALDR 1248
Query: 364 LMHVYRREFT----------------AMGG-------------YLTDAGEVLLDRVEKFI 394
L+ +Y+ T A+ G YLTD G V L ++ +
Sbjct: 1249 LVRMYKTAVTHTMINDLKSKIRELSLALDGKSEEIDPDDGDKRYLTDNGIVNLHMLQMIL 1308
Query: 395 QSVAVYEDQIFQKRTRIQQAYEYNEAMKLNARRESSEELLQAPVAVADTVKLGEPGYKER 454
+ ED IF++R +Q E N K + ES D V+LG G+K+R
Sbjct: 1309 TELGKEEDVIFRER---RQKNEMNSKYKCEIQHESE-----------DNVRLGMDGWKDR 1354
Query: 455 YYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKD 514
YY KF++S E + + ++ YV+GLCW+ YY+ SWQWFYPYHYAPFA D K+
Sbjct: 1355 YYEYKFDVSPSHEPEFIN-NLADSYVKGLCWISMYYFHGCPSWQWFYPYHYAPFAMDFKN 1413
Query: 515 LSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDP--SSPIYKFYPPDFQID 572
++ L+ F +GEP +P +QLM LP ++ LP +R LM SPI FYP DF+ID
Sbjct: 1414 ITHLQNDFEVGEPLKPLEQLMAILPPSNDHLLPITWRPLMIGEPGDSPIRDFYPGDFEID 1473
Query: 573 MNG 575
++G
Sbjct: 1474 LSG 1476
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 110/305 (36%), Positives = 158/305 (51%), Gaps = 46/305 (15%)
Query: 70 PAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRFRAAKDAAEA 129
P P + ++ F+ + +ID + +VRP+K+LY+A+DGV P AK N +R+RRF + K+ +
Sbjct: 40 PLPINEEEKFEGMSKFIDMLMEIVRPKKMLYIAVDGVTPFAKNNSRRSRRFLSDKEERMS 99
Query: 130 EAEEERLRKEFEEAGKLLSAKEKPE-TCDSNVITPGTQFMAVLSAALQYFIQARLNQIPG 188
+ E + + + E G S E + N+I PGT+FM+ L L +I ++N P
Sbjct: 100 DTELDLI---WHEKGFSESESSADELEFNRNLICPGTKFMSRLHVHLHEYIANKINTQPS 156
Query: 189 WQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIMLSLATHEIH 248
W KVILSDA VPGEGEHKIM +R Q+ P D N+RHC+Y D LATHE +
Sbjct: 157 WVGIKVILSDATVPGEGEHKIMEIVRRQKATPTHDINSRHCIYSNDG------LATHEPN 210
Query: 249 FSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIHKKKYQFLNIW 308
SI+R+ I L DW D P Y F+
Sbjct: 211 LSIIRKEIPL----------------------------GDW-CKDKVP-----YFFITKL 236
Query: 309 VLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHVY 368
E Y + + IN R +DD+VFLC +GNDFLP +P+L I E A++ L+ +Y
Sbjct: 237 QCLEKEMYVAGLGSGVHNIN--RTIDDWVFLCCLLGNDFLPKLPSLNINEKALDRLIRMY 294
Query: 369 RREFT 373
+ T
Sbjct: 295 KTAVT 299
Score = 145 bits (366), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 68/153 (44%), Positives = 96/153 (62%), Gaps = 4/153 (2%)
Query: 479 YVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTL 538
YV+GLCW+ YYY SWQWFYPYHYAPFA D ++++L+ F +GEP +P +QLM L
Sbjct: 324 YVKGLCWISMYYYHGCPSWQWFYPYHYAPFAMDFINITNLQNDFEVGEPLKPLEQLMAIL 383
Query: 539 PAASSSALPEKYRNLMTDP--SSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLR 596
++ LP +R LMTD SPI FYP DF+ D+NG+++ +GV ++PF+DE L
Sbjct: 384 TPSNDHLLPTTWRPLMTDELGDSPISDFYPDDFETDLNGEKYTSRGVARIPFVDETRLKE 443
Query: 597 QTKKLEVFLTEEELFRNSVMLDLLYVHPQHPLY 629
+ L LT +E RN + +++ HP Y
Sbjct: 444 ALEGL--HLTRDEECRNRFGHNAVFLDATHPAY 474
>gi|238878282|gb|EEQ41920.1| 5'-3' exoribonuclease 1 [Candida albicans WO-1]
Length = 1422
Score = 229 bits (584), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 131/309 (42%), Positives = 187/309 (60%), Gaps = 40/309 (12%)
Query: 101 LAIDGVAPRAKMNQQRTRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNV 160
+AIDGVAPRAKMNQQR RRFR A +A E L+K E ++ KE P DSN
Sbjct: 1 MAIDGVAPRAKMNQQRARRFRTAYEA------EINLKKAIENGEEI--PKEDP--FDSNS 50
Query: 161 ITPGTQFMAVLSAALQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLP 220
ITPGT+FMA L+ L+YFI ++ + W ++ILS VPGEGEHKIM YIR R+
Sbjct: 51 ITPGTEFMAKLTNNLKYFIHKKITEDSSWANIEIILSGHEVPGEGEHKIMEYIRSIRSQD 110
Query: 221 GFDPNTRHCLYGLDADLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHG 280
++PN RHC+YGLDADLIML L TH+ HF++LRE +T Q+ +VG
Sbjct: 111 DYNPNLRHCIYGLDADLIMLGLVTHDPHFALLREEVTFGPQR-------KVG-------- 155
Query: 281 KPGDNPADWNGVDDTPIHKKKYQFLNIWVLREYLQYEL-DIPNP-PFPINFERIVDDFVF 338
P D +H +K+ L++ +LREYL E +I N F +F+RI+DDF+
Sbjct: 156 -----PKD--------LHDQKFYLLHLSLLREYLSLEFQEIENQLNFEYDFDRILDDFIL 202
Query: 339 LCFFVGNDFLPHMPTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVA 398
+ + +GNDFLP++P L I +GA LL+ +++ GY+ + G++ L R+ +I+ ++
Sbjct: 203 IMYVIGNDFLPNLPDLFINKGAFPLLIAAFKQTLLESDGYINENGKINLVRLNIYIKILS 262
Query: 399 VYEDQIFQK 407
+E + F+K
Sbjct: 263 KFEFENFEK 271
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 81/184 (44%), Positives = 105/184 (57%), Gaps = 8/184 (4%)
Query: 450 GYKERYYADKFEIS-NPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPF 508
+K YY K S + EE ++ Y+EGL WV YYY+ SW W+Y YHYAP
Sbjct: 431 SWKNDYYQSKLHFSIDTEEGKGDLIEMTKHYIEGLQWVLYYYYRGCPSWNWYYRYHYAPR 490
Query: 509 ASDLK-DLSDL-----EITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIY 562
SD+ L +L ++ F L PF+PF+QLM LPA S +P YR LM+D SPI
Sbjct: 491 ISDISLGLEELINEKTDLKFELSHPFKPFEQLMAVLPARSKKLMPVVYRPLMSDEKSPII 550
Query: 563 KFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYV 622
FYP + IDMNGK +W+ VV L F+DEK L+ K +E LT EE RNS + ++
Sbjct: 551 NFYPHEVDIDMNGKTASWEAVVLLDFVDEKKLIEALKPIESKLTPEEKQRNSYGHAIKFI 610
Query: 623 H-PQ 625
H PQ
Sbjct: 611 HNPQ 614
>gi|68467492|ref|XP_722179.1| hypothetical protein CaO19.4969 [Candida albicans SC5314]
gi|46444129|gb|EAL03406.1| hypothetical protein CaO19.4969 [Candida albicans SC5314]
Length = 1422
Score = 229 bits (583), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 131/309 (42%), Positives = 187/309 (60%), Gaps = 40/309 (12%)
Query: 101 LAIDGVAPRAKMNQQRTRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNV 160
+AIDGVAPRAKMNQQR RRFR A +A E L+K E ++ KE P DSN
Sbjct: 1 MAIDGVAPRAKMNQQRARRFRTAYEA------EINLKKAIENGEEI--PKEDP--FDSNS 50
Query: 161 ITPGTQFMAVLSAALQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLP 220
ITPGT+FMA L+ L+YFI ++ + W ++ILS VPGEGEHKIM YIR R+
Sbjct: 51 ITPGTEFMANLTNNLKYFIHKKITEDSSWANIEIILSGHEVPGEGEHKIMEYIRSIRSQD 110
Query: 221 GFDPNTRHCLYGLDADLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHG 280
++PN RHC+YGLDADLIML L TH+ HF++LRE +T Q+ +VG
Sbjct: 111 DYNPNLRHCIYGLDADLIMLGLVTHDPHFALLREEVTFGPQR-------KVG-------- 155
Query: 281 KPGDNPADWNGVDDTPIHKKKYQFLNIWVLREYLQYEL-DIPNP-PFPINFERIVDDFVF 338
P D +H +K+ L++ +LREYL E +I N F +F+RI+DDF+
Sbjct: 156 -----PKD--------LHDQKFYLLHLSLLREYLSLEFQEIENQLNFEYDFDRILDDFIL 202
Query: 339 LCFFVGNDFLPHMPTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVA 398
+ + +GNDFLP++P L I +GA LL+ +++ GY+ + G++ L R+ +I+ ++
Sbjct: 203 IMYVIGNDFLPNLPDLFINKGAFPLLIAAFKQTLLESDGYINENGKINLVRLNIYIKILS 262
Query: 399 VYEDQIFQK 407
+E + F+K
Sbjct: 263 KFEFENFEK 271
Score = 142 bits (357), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 81/184 (44%), Positives = 105/184 (57%), Gaps = 8/184 (4%)
Query: 450 GYKERYYADKFEIS-NPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPF 508
+K YY K S + EE ++ Y+EGL WV YYY+ SW W+Y YHYAP
Sbjct: 431 SWKNDYYQPKLHFSIDTEEGKGDLIEMTKHYIEGLQWVLYYYYRGCPSWNWYYRYHYAPR 490
Query: 509 ASDLK-DLSDL-----EITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIY 562
SD+ L +L ++ F L PF+PF+QLM LPA S +P YR LM+D SPI
Sbjct: 491 ISDISLGLEELINEKTDLKFELSHPFKPFEQLMAVLPARSKKLMPVVYRPLMSDEKSPII 550
Query: 563 KFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYV 622
FYP + IDMNGK +W+ VV L F+DEK L+ K +E LT EE RNS + ++
Sbjct: 551 NFYPHEVDIDMNGKTASWEAVVLLDFVDEKKLIEALKPIESKLTPEEKQRNSYGHAIKFI 610
Query: 623 H-PQ 625
H PQ
Sbjct: 611 HNPQ 614
>gi|84998436|ref|XP_953939.1| 5'-3' exoribonuclease (XRN2, DHM1 ) [Theileria annulata]
gi|65304937|emb|CAI73262.1| 5'-3' exoribonuclease (XRN2, DHM1 homologue), putative [Theileria
annulata]
Length = 619
Score = 228 bits (582), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 180/634 (28%), Positives = 289/634 (45%), Gaps = 116/634 (18%)
Query: 2 GVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGIIH 61
GVP Y W+ + + S V + +D ++ +GV D Y+DMN +IH
Sbjct: 79 GVPRLYGWMMENF--SRVRIPLDDSEI-SKGV----------------DYFYVDMNAVIH 119
Query: 62 PCFHPDGKPAPTSYDDV-FKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
H + P D + I + + F LV+P+K++Y+ +DGV P AK+NQQRTRRF
Sbjct: 120 SATHGNIFPILMMEDQQRMRRIVAALLNTFNLVKPKKMMYIGVDGVCPSAKINQQRTRRF 179
Query: 121 RAAKDA-AEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFI 179
R K + ++ E + K + KL + + + I+PGTQFM+++ + ++ +I
Sbjct: 180 RLYKSSNSDNEYYKVEDGKMKYKVNKLKIGAYDNVSFNPSYISPGTQFMSMMDSEIRNWI 239
Query: 180 QARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIM 239
A N W ++ + +VPGEGEHKI IR L N+ H +YGLDADL+M
Sbjct: 240 -ALQNYEGTWNDCYIVYNGTDVPGEGEHKIYDTIRKMLELDPDVRNSTHLVYGLDADLVM 298
Query: 240 LSLATHEIHFSILREVIT-----LPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDD 294
LSL T ILRE + L ++ + + G L HGK D
Sbjct: 299 LSLITKLPKMYILREEYSYTPHILSKEKPDPYYSKKTGLL--HIHGK-----------DF 345
Query: 295 TPIHKKKYQFLNIWVLREY---------------LQYELDIPNPPFPINFERIVDDFVFL 339
+ Y+ L++ +LR+ L L IPN R+ DDF L
Sbjct: 346 IDLKSNNYEVLSMNLLRKTMYSRCMSISGSVKNDLNRFLFIPNAK-----NRLTDDFSLL 400
Query: 340 CFFVG-NDFLPHMPTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVA 398
F G NDFLPH+P++E+ + N L+++Y + + G+LT ++ + R++ ++ +
Sbjct: 401 SFMAGRNDFLPHLPSVELCNSSFNDLINMYYKMLPKLRGFLTLNYKINMSRLQLLMKELC 460
Query: 399 VYEDQIFQKRTRIQQAYEYNEAMKLNARRESSEELLQAPVAVADTVKLGEPGYKERYYAD 458
E F+ ++ ++ +Y++ K Y + YY +
Sbjct: 461 KKEFDYFKMKSVSEKISDYSDPKK----------------------------YAKYYYEN 492
Query: 459 KFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDL 518
K +I + K + +C Y YHYAP SDL +S
Sbjct: 493 KCDIDFNNK----------KAIRKMC----------------YKYHYAPLVSDLAKISGT 526
Query: 519 EITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRF 578
I F+ GEP P + L+ P +S LP YR+L + P + +++P DF+I +GK
Sbjct: 527 TIKFYKGEPITPLEHLLAITPPNNSQLLPPVYRSL-SGPDGSLCQYFPEDFEICQDGKDN 585
Query: 579 AWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFR 612
W+ VVKLPF+D K L + + + L L++
Sbjct: 586 EWEHVVKLPFLDTKHLCQVARSVNDELKYNNLYK 619
>gi|123507009|ref|XP_001329319.1| XRN 5'-3' exonuclease N-terminus family protein [Trichomonas
vaginalis G3]
gi|121912273|gb|EAY17096.1| XRN 5'-3' exonuclease N-terminus family protein [Trichomonas
vaginalis G3]
Length = 1017
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 176/615 (28%), Positives = 274/615 (44%), Gaps = 103/615 (16%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGV FYRWL RYPL R +S P N N Y+D N II
Sbjct: 1 MGVAGFYRWLVQRYPLI---------------RQRANRLSYPRIN-----NFYIDFNCII 40
Query: 61 HPCFHPDGKPAPTSYDDV-FKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRR 119
+ KP+ + V F I Y+D + ++P LL++A+DG AP AK QQR+RR
Sbjct: 41 YNSIRL-VKPSLDGDNTVLFNEICRYVDLLVQTIKPESLLFIAVDGPAPLAKCAQQRSRR 99
Query: 120 FRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFI 179
F AA+D + T + I+ GT+FM L L FI
Sbjct: 100 FVAARDHEDG-------------------------TFSTAAISVGTEFMEELHEHLLKFI 134
Query: 180 QARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIM 239
+R+ P W KVI S PGEGE+K +Y+R D HC+Y DADL+
Sbjct: 135 NSRIENDPIWSQPKVIYSSHRTPGEGENKFFNYMREHMFTEEHDEFATHCIYSPDADLVF 194
Query: 240 LSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIHK 299
L+L T + ++RE + G E G++ L PGD
Sbjct: 195 LALQTGLKNIYLMREWGSWMGPNEDV-ANGEIDKLRVS----PGD--------------- 234
Query: 300 KKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREG 359
++ L++ +LR+Y Q E P P R+++DFV + F +GNDF+PH P ++I G
Sbjct: 235 --FELLHLPLLRDYFQKEF--PESDLP----RLINDFVAISFLIGNDFIPHFPEIDIHNG 286
Query: 360 AINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYEYNE 419
+ ++ YR LLDR + I Y+ + + +
Sbjct: 287 DFDNILTAYRLS--------------LLDRKKYLITEEITYDK---------ENLLAFLK 323
Query: 420 AMKLNARRESSEELLQAPVAVADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKY 479
A+ N R ++ A A + +L Y K++ +E + +++
Sbjct: 324 AVVANVRSKARPSGKPAKTKHAKSTELHTKEGARSYLKSKYKSGFNKEFE---EELCHSV 380
Query: 480 VEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKD-LSDLEITFFLGEPFRPFDQLMGTL 538
++ WV +YY++ + W + Y Y P + + + D E F G P PF+QL+ L
Sbjct: 381 IDSFNWVLKYYFEGCPDYTWQFHYFYPPPLVLVAEYVLDYEPNFEQGRPPLPFEQLLSIL 440
Query: 539 PAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQT 598
P S LP +LM P SP+ ++YP F+ID+NG+++ ++GV +PF+D + + +T
Sbjct: 441 PPKMSYLLPYPIASLMFSP-SPLAEYYPDKFEIDLNGRKYEYEGVTLIPFVDMEKIRTET 499
Query: 599 KKLEVFLTEEELFRN 613
++ L+ +E RN
Sbjct: 500 SRVFGALSPKEKKRN 514
>gi|399218119|emb|CCF75006.1| unnamed protein product [Babesia microti strain RI]
Length = 759
Score = 225 bits (574), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 171/611 (27%), Positives = 275/611 (45%), Gaps = 100/611 (16%)
Query: 2 GVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGIIH 61
GVP Y W+ D P V + + SK G D LYLD+NGI H
Sbjct: 36 GVPRLYGWIMDTVPF----------------VTKTLASSKI---GKNIDCLYLDLNGIYH 76
Query: 62 PCFHPDGKPAPTSYD----DVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRT 117
P H + P D FK IF I +I+ +++P+KLLYLA DGV P AK+NQQRT
Sbjct: 77 PATHGN---VPIQLDIGQSQRFKRIFTAISNIYSIIKPKKLLYLASDGVCPAAKINQQRT 133
Query: 118 RRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDS----NVITPGTQFMAVLSA 173
RR R++ + + ER ++ +LS+ T N+I+PGT+F+ L
Sbjct: 134 RRNRSSIGNIQDQINPERFANIQKQLETVLSSCGDNRTSTQPFTPNMISPGTEFIVTLEN 193
Query: 174 ALQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGL 233
L+ ++ ++++ + V+ S ++VPGEGEHKI I+ L +YGL
Sbjct: 194 ELRKWLFLKVSE-GFFGNCDVVFSGSDVPGEGEHKIFQSIKSASRLSSM-------VYGL 245
Query: 234 DADLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPAD----W 289
DADL++L+ T ILRE G H+AA P N +
Sbjct: 246 DADLMLLASLTQGNKCIILRE------------KRGYTPHVAARRKPNPYYNSTTGLVHF 293
Query: 290 NGVDDTPIHKKKYQFLNIWVLREYLQYELDIPNPPFPINF--------ERIVDDFVFLCF 341
+ D + K+ ++ +N+ + + Y + IN+ + DFVFL F
Sbjct: 294 HKRDFLTLQKRHFELVNLKAVAMHF-YNRLVTKDKKKINYNGSEDDFVNSLTRDFVFLTF 352
Query: 342 FVGNDFLPHMPTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYE 401
GNDFLP +P +++ + + + Y + F +GG++T+ + R +KF++ + +E
Sbjct: 353 LAGNDFLPRVPAVDLADESFTPFILSYFKNFDQIGGFITNGDSYSISRFKKFLEFPSTFE 412
Query: 402 DQIFQKRTRIQQAYEYNEAMKLNARRESSEELLQAPVAVADTVKLGEPGYKERYYADKFE 461
F+ R +KL ++ E Y + YY KF
Sbjct: 413 QNWFRLR-----------GLKLGIAEFTTNE------------------YAKYYYKIKFG 443
Query: 462 ISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDL--E 519
+ ++ + + K +V Y+ GL W YY + W W Y +HYAP +D+ +
Sbjct: 444 VDVTDQPEFI-KGLVNDYLTGLHWNMFYYNRSYSCWNWSYKHHYAPLLTDMCKYKYKFNK 502
Query: 520 ITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFA 579
F G+P L+ P + LPE+ R++ + +++P D ++D +G
Sbjct: 503 QMFKNGKPVSQLTHLLSVCPPEDNYLLPEQLRDI-----DELNQYFPSDVEVDKDGYNNE 557
Query: 580 WQGVVKLPFID 590
W+ VVK+PFID
Sbjct: 558 WEYVVKMPFID 568
>gi|328854884|gb|EGG04014.1| hypothetical protein MELLADRAFT_28527 [Melampsora larici-populina
98AG31]
Length = 206
Score = 224 bits (572), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 112/209 (53%), Positives = 146/209 (69%), Gaps = 12/209 (5%)
Query: 50 DNLYLDMNGIIHPCFHPDGKPAP--TSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVA 107
DNLYLDMNGIIH C HP+ + A + + +F +IF Y++H+F LV+P+KL ++A+DGVA
Sbjct: 1 DNLYLDMNGIIHNCSHPNEEDAHFRITEEQIFLAIFGYLEHLFALVKPQKLFFMAVDGVA 60
Query: 108 PRAKMNQQRTRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQF 167
PRAKMNQQR+RRFR AKD + + ER G+ L + E DSN ITPGT F
Sbjct: 61 PRAKMNQQRSRRFRTAKDRKDMIDKAER-------KGETLPSTE---AFDSNCITPGTPF 110
Query: 168 MAVLSAALQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTR 227
MA LS L+YFI +++ WQ +V+ S +VPGEGEHKIM YIRL + P ++PN R
Sbjct: 111 MARLSEQLKYFINQKVSTDSAWQGVQVVFSGHDVPGEGEHKIMEYIRLAKAQPDYNPNVR 170
Query: 228 HCLYGLDADLIMLSLATHEIHFSILREVI 256
HCLYGLDADLIML+L +H+ HF +LRE +
Sbjct: 171 HCLYGLDADLIMLALLSHDPHFCLLREEV 199
>gi|62321273|dbj|BAD94484.1| hypothetical protein [Arabidopsis thaliana]
Length = 447
Score = 223 bits (567), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 108/206 (52%), Positives = 138/206 (66%), Gaps = 2/206 (0%)
Query: 489 YYYQDVCSWQWFYPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPE 548
YYY VCSW WFYPYHYAPFASDLK L L+I F LG PF+PF+QL+ LP+AS+ ALPE
Sbjct: 3 YYYHGVCSWNWFYPYHYAPFASDLKGLEKLDIKFELGSPFKPFNQLLAVLPSASAHALPE 62
Query: 549 KYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEE 608
YR+LMT+P SPI FYP DF+IDMNGKR++WQG+ KLPF++EK LL ++E LT E
Sbjct: 63 CYRSLMTNPDSPIADFYPADFEIDMNGKRYSWQGISKLPFVEEKRLLEAAAQVEKSLTNE 122
Query: 609 ELFRNSVMLDLLYVHPQHPLYQQITLYCQLYHQLPPQDRFAW--EIDVNASGGMNGYIWL 666
E+ RNS + D+L+V HPL + I + L ++R +ID S GMNGYI
Sbjct: 123 EIRRNSALFDMLFVVASHPLGELIRSLNSRTNNLSNEERATIIEKIDPGLSDGMNGYIAS 182
Query: 667 CERNGLRSIIPSPVKGLPDIERNQAM 692
C + S S V+G+ D+ NQ +
Sbjct: 183 CGGDSQPSCFCSTVEGMEDVLTNQVI 208
>gi|147862841|emb|CAN82967.1| hypothetical protein VITISV_021856 [Vitis vinifera]
Length = 500
Score = 223 bits (567), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 114/196 (58%), Positives = 135/196 (68%), Gaps = 2/196 (1%)
Query: 499 WFYPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPS 558
WFYPYHYAPFASDLKDL L I+F LG PF+PF+QL+G PAASS ALPE+YR LMTDP+
Sbjct: 27 WFYPYHYAPFASDLKDLGQLNISFELGSPFKPFNQLLGVFPAASSHALPEEYRKLMTDPN 86
Query: 559 SPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLD 618
SPI FYP DF++DMNGKRFAWQG+ KLPFIDE LL + +K+E LTEEE RNSVM D
Sbjct: 87 SPIIDFYPTDFEVDMNGKRFAWQGIAKLPFIDEARLLAEVQKIEHTLTEEEFRRNSVMFD 146
Query: 619 LLYVHPQHPLYQQITLYCQLYHQLPPQDR--FAWEIDVNASGGMNGYIWLCERNGLRSII 676
+L+V HPL I +L +R ++D ASGGMNGYI LC + I
Sbjct: 147 MLFVALSHPLSPYIFSLDDRCKKLTDNERTEVKEQLDPRASGGMNGYISLCGGDPCPPIF 206
Query: 677 PSPVKGLPDIERNQAM 692
SP+ L DI NQ +
Sbjct: 207 RSPIASLEDIMDNQVI 222
>gi|167516040|ref|XP_001742361.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778985|gb|EDQ92599.1| predicted protein [Monosiga brevicollis MX1]
Length = 290
Score = 221 bits (563), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 122/261 (46%), Positives = 158/261 (60%), Gaps = 42/261 (16%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP ++ L +RYP +I+ EE P EFDN YLD NGI+
Sbjct: 1 MGVPRLFKLLVERYP-AILRGTEEHPMP-------------------EFDNFYLDFNGIV 40
Query: 61 HPCFHP---DGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRT 117
H C H D + + D+ +IF I +F ++RP++LLY+AIDGVAPRAKM QQR
Sbjct: 41 HNCTHGNEGDVRKSSQVTQDMMMAIFHEIQTLFDIIRPQRLLYIAIDGVAPRAKMQQQRQ 100
Query: 118 RRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKP----ETCDSNVITPGTQFMAVLSA 173
RRF+A +D+ EA + ++A P E DSN ITPGT+FM +L
Sbjct: 101 RRFKATRDS---------------EAAQQITAVVAPPMPEEHFDSNCITPGTEFMDLLQR 145
Query: 174 ALQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGL 233
L YFIQ +L + W+ +V+LS VPGEGEHKIM +IR ++ P +DPNTRHCL+GL
Sbjct: 146 HLVYFIQRKLEEDDDWRKVEVVLSGHQVPGEGEHKIMDFIRSLKSQPAYDPNTRHCLHGL 205
Query: 234 DADLIMLSLATHEIHFSILRE 254
DADLIML+LATHE HF+ILRE
Sbjct: 206 DADLIMLALATHEPHFAILRE 226
>gi|71415930|ref|XP_810014.1| 5'-3' exonuclease XRNA [Trypanosoma cruzi strain CL Brener]
gi|70874484|gb|EAN88163.1| 5'-3' exonuclease XRNA, putative [Trypanosoma cruzi]
Length = 266
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 118/274 (43%), Positives = 159/274 (58%), Gaps = 46/274 (16%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP F+RW+A+R P I + P VD NLYLDMNGII
Sbjct: 1 MGVPKFFRWVAERCPTVITPFRDSPPPVD---------------------NLYLDMNGII 39
Query: 61 HPCFHP---DGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRT 117
H C H D + + +++F Y++ +F +++PRK +LA+DGVAPRAKMNQQR
Sbjct: 40 HNCTHTNDVDATQKSPTEKAMMEAMFAYLEKLFNVIQPRKYFFLAVDGVAPRAKMNQQRQ 99
Query: 118 RRFRA------AKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVL 171
RR+R+ A+ A A+ EE ++ + DSN ITPGT FM +
Sbjct: 100 RRYRSGYELMVARQEAIAQGEE---------------VPDEKDVFDSNCITPGTNFMVRV 144
Query: 172 SAALQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLY 231
S QYFI ++ P WQ +V+ S + PGEGEHKI+ +IR ++ PG+ PN HC+Y
Sbjct: 145 SEQFQYFITMKIATDPAWQNCQVVYSGHDNPGEGEHKIVDFIRRRKMQPGYSPNETHCMY 204
Query: 232 GLDADLIMLSLATHEIHFSILREVITL-PGQQEK 264
GLDADL+MLSLATHE HF +LREV+T PGQ+ +
Sbjct: 205 GLDADLVMLSLATHEPHFLLLREVVTFGPGQESR 238
>gi|429964640|gb|ELA46638.1| hypothetical protein VCUG_01864 [Vavraia culicis 'floridensis']
Length = 707
Score = 217 bits (553), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 181/709 (25%), Positives = 294/709 (41%), Gaps = 106/709 (14%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQ----VDGEGV----ARPVDVSKPNPNGMEFDNL 52
MGVP+ +RWL +YP I +P +D + P D P N+
Sbjct: 32 MGVPSLFRWLTKKYPQVIEKATPNNPTDVLYIDFNAIIHISCAPSDGPTPVNEDEMMQNV 91
Query: 53 YLDMNGIIHPCF-------HPDGKPAPTSYDDV----FKSIFDYID---HIFLLVRPRKL 98
+++ I+ C DG + ++SI + ++ F +
Sbjct: 92 EKNIDSIVSKCLPRKMIVISTDGVAPRAKLNQQRSRRYRSIIEALELSKKSFESTKSVNF 151
Query: 99 LYLAIDGVAPRAK---------------MNQQRTRRFRAAKDAAEAEAEEERLRKEFEE- 142
+ + + AK M+ + + D A +E + +E E
Sbjct: 152 VEKTKEKIQKLAKASTIKDEYKVDFVGLMDNSTSDEKNSGADEANGRRKERKCNEENAEP 211
Query: 143 -----------AGKLL--SAKEKPETCDSNVITPGTQFMAVLSAALQYFIQARLNQIPGW 189
A LL S+ + E D N ITPGT+FM L + FI+ RL P +
Sbjct: 212 EDVEIGEYDKHASDLLEESSLTEDEAFDKNAITPGTRFMYDLEKRMDQFIRNRLVNDPKY 271
Query: 190 QFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIMLSLATHEIHF 249
+ I S+ GEGE KIM+ IR +N N +H +Y DADLI L + H +
Sbjct: 272 KNLCFIYSNGRRAGEGEQKIMTLIRKMKN-----RNLKHTIYSPDADLIFLGTSLHGRNV 326
Query: 250 SILREVITLPGQQEK--CFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIHKKKYQFLNI 307
I+RE + Q + C CG+ GHL+ C + A ++ + F ++
Sbjct: 327 KIMREDLEFVHLQRQHYCEKCGKKGHLSTYC-----NKLALFSCI-----------FFDL 370
Query: 308 WVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHV 367
VL+ L EL + F R+VDD++ + F GNDFLP + ++R AI +L +
Sbjct: 371 IVLKRILSEELSMLVHT-SYEFNRMVDDWILMSFLAGNDFLPTLQCFDVRFEAIEILTKL 429
Query: 368 YRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYEYNEAMKLNARR 427
F Y+T GE+ + F + ++ +ED ++ K+ ++ + RR
Sbjct: 430 LAENFNQTKKYITYKGEIDFSVLRNFFKILSQHEDSLYVKKKKLLA----------DTRR 479
Query: 428 ESSEELLQAPVAVADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVC 487
+ + + L K RYY K + + E+ V ++ Y+ GL WV
Sbjct: 480 RFQIK------GFFENIPLETTYGKTRYYDTKLSLKSEREVITVCRE----YILGLSWVF 529
Query: 488 RYYYQDVCSWQWFYPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALP 547
+YY + +W+WFYPY YAPFA D+ ++ + EP Q M +P S +P
Sbjct: 530 KYYVKGATNWEWFYPYDYAPFACDIANVRSMPYLNKRTEPLDCLQQQMLVMPPQSKGLVP 589
Query: 548 EKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTE 607
++ PI+ +P + +IDM K WQGV LP ID + LL Q K+ +
Sbjct: 590 KEMH--------PIFNSFPTEIKIDMFDKLLPWQGVAILPIIDIETLLYQIKEKRSLIKY 641
Query: 608 EELFRNSVMLDLLYVHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVNA 656
+ DL YV + L++ + LY P +E+++ A
Sbjct: 642 NDAILGIESRDLFYVGSNNKLFKCLK---SLYVDGPSHTTVFFEVELMA 687
>gi|71416427|ref|XP_810246.1| 5'-3' exonuclease XRNA [Trypanosoma cruzi strain CL Brener]
gi|70874749|gb|EAN88395.1| 5'-3' exonuclease XRNA, putative [Trypanosoma cruzi]
Length = 230
Score = 216 bits (549), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 114/260 (43%), Positives = 154/260 (59%), Gaps = 33/260 (12%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP F+RW+A+R P I + P VD NLYLDMNGII
Sbjct: 1 MGVPKFFRWVAERCPTVITPFRDSPPPVD---------------------NLYLDMNGII 39
Query: 61 HPCFHP---DGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRT 117
H C H D + + +++F Y++ +F +++PRK +LA+DGVAPRAKMNQQR
Sbjct: 40 HNCTHTNDVDATQKSPTEKAMMEAMFAYLEKLFNVIQPRKYFFLAVDGVAPRAKMNQQRQ 99
Query: 118 RRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQY 177
RR+R+ + A R+E G+ ++ + DSN ITPGT FM +S QY
Sbjct: 100 RRYRSGYELMVA-------RQEAIAQGE--EVPDEKDVFDSNCITPGTNFMVRVSEQFQY 150
Query: 178 FIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADL 237
FI ++ P WQ +V+ S + PGEGEHKI+ +IR ++ PG+ PN HC+YGLDADL
Sbjct: 151 FITMKIATDPAWQNCQVVYSGHDNPGEGEHKIVDFIRRRKMQPGYSPNETHCMYGLDADL 210
Query: 238 IMLSLATHEIHFSILREVIT 257
+MLSLATHE HF +LREV+T
Sbjct: 211 VMLSLATHEPHFLLLREVVT 230
>gi|358340790|dbj|GAA27297.2| 5'-3' exoribonuclease 1 [Clonorchis sinensis]
Length = 1804
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 119/323 (36%), Positives = 181/323 (56%), Gaps = 46/323 (14%)
Query: 88 HIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRFRAAKDAAEAEAEEERLRKEFEEAGKLL 147
++ L+RPRK L+LA+DGVAPRAKM QQR RRF++A++A + +A+ ++ G+
Sbjct: 8 YLVQLIRPRKTLFLAVDGVAPRAKMTQQRARRFQSAQEARKTKADAQK-------RGQAT 60
Query: 148 SAKEKPETCDSNVITPGTQFMAVLSAALQYFIQARLNQIPGWQFTKVILSDANVPGEGEH 207
S E D VI+PGT+FM L L+ F++ + NQ W+ +ILS + PGEGEH
Sbjct: 61 SV----ELFDPCVISPGTEFMERLHNVLKEFVKEQANQNEAWKHVDIILSGHDCPGEGEH 116
Query: 208 KIMSYIRLQRNLPGFDPNTRHCLYGLDADLIMLSLATHEIHFSILREVITLPGQQEKCFV 267
KI Y+ +R+ P + PN R+C+YG+DADLI L L THE++ ILRE + + K V
Sbjct: 117 KIREYMSFKRHQPDYCPNERYCIYGMDADLIFLGLTTHELNMCILRENVV----KTKTCV 172
Query: 268 CGQVGHLAAECHGKPGDNPADWNGVDDTPIHKKKYQFLNIWVLREYLQYELD-IPNP-PF 325
Q+ + + VLREY+ E + + N PF
Sbjct: 173 AEQL-----------------------------PFCVTYLSVLREYIDCEFEALKNSLPF 203
Query: 326 PINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHVYRREFTAMGGYLTDAGEV 385
P + ERIVDD++F+ F +GNDF+PH+P L I ++ +L Y + GYL + G +
Sbjct: 204 PYDLERIVDDWIFMAFLLGNDFIPHIPNLHIHAESLLVLWDTYHVVLPQLDGYLVEYGRL 263
Query: 386 LLDRVEKFIQSVAVYEDQIFQKR 408
L R ++I+ ++ +E F++R
Sbjct: 264 NLQRFHRYIEELSKFEQSWFEER 286
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 132/288 (45%), Gaps = 28/288 (9%)
Query: 353 TLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQ 412
++E ++ L ++ + G +L + E++ E I + ++ Q
Sbjct: 339 SIENELSSLTALTSLFAADDLFHGEFLDETEELI---AEGVISHIPSAQETKPQNDLIAS 395
Query: 413 QAYEYNEAMKLNARRESSEELLQAPVAVADTVKLGEPGYKERYYADKFEI--SNPEEIDK 470
Q + ++ + ++ E ELL +D +L ++ YY K I + EE+ +
Sbjct: 396 QLVDADQLLSSSSSFEDDAELL------SDEDELVYRMHRRDYYWTKLSIPVGSEEELKR 449
Query: 471 VKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDL---------------KDL 515
+V YV L W+ YY+ V W ++Y YHYAPFA DL D
Sbjct: 450 RLMPLVTDYVRMLQWILSYYFLRVADWNFYYAYHYAPFACDLMLYTAQFANSQLGSSSDN 509
Query: 516 SDLEITFFL--GEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDM 573
DL T F +P PF Q M +PA + +P+ +R+LMT SP+ F+P F D+
Sbjct: 510 EDLSWTKFDFDSQPVLPFVQQMMIMPADGAYIVPQVFRSLMTSSDSPLAPFFPETFATDI 569
Query: 574 NGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLY 621
NGK +W+ VV +PFIDE +LL+ + L LT E RN L Y
Sbjct: 570 NGKIASWEAVVLIPFIDETILLKAMEPLNKGLTAAEQKRNQHNSHLFY 617
>gi|367024791|ref|XP_003661680.1| hypothetical protein MYCTH_92876 [Myceliophthora thermophila ATCC
42464]
gi|347008948|gb|AEO56435.1| hypothetical protein MYCTH_92876 [Myceliophthora thermophila ATCC
42464]
Length = 1055
Score = 213 bits (542), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 109/211 (51%), Positives = 140/211 (66%), Gaps = 13/211 (6%)
Query: 56 MNGIIHPCFHPDGKPA--PTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMN 113
MNGIIH C H D + +++F +IF+YI+H+F ++P+KL ++A+DGVAPRAKMN
Sbjct: 1 MNGIIHNCTHKDSDDVHFRLTEEEMFIAIFNYIEHLFSKIKPKKLFFMAVDGVAPRAKMN 60
Query: 114 QQRTRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSA 173
QQR RRFR A DA +A + R KE K E DSN ITPGT+FMA LS
Sbjct: 61 QQRARRFRTALDAEKAREKAIREGKELP----------KEEPFDSNCITPGTEFMAKLSQ 110
Query: 174 ALQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGL 233
L+YFI ++++ WQ +++LS VPGEGEHKIM YIR R P + PN RHCLYGL
Sbjct: 111 QLKYFINKKVSEDRAWQQPEIVLSGHEVPGEGEHKIMEYIRNARAQPDYSPNVRHCLYGL 170
Query: 234 DADLIMLSLATHEIHFSILREVITLPGQQEK 264
DADLIML L +H+ HF +LRE +T G+Q K
Sbjct: 171 DADLIMLGLLSHDPHFCLLREEVTF-GRQAK 200
>gi|323455278|gb|EGB11147.1| hypothetical protein AURANDRAFT_22633 [Aureococcus anophagefferens]
Length = 356
Score = 212 bits (540), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 152/389 (39%), Positives = 210/389 (53%), Gaps = 62/389 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPAF+RWLA RYP P++ ++ +NLY+D NG++
Sbjct: 1 MGVPAFFRWLAARYP--------------------PLEA-----RWVQVENLYVDCNGVV 35
Query: 61 HPCFHPDGKPA--PTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
HPC HP+G A P + +++ ++ Y+D + RP KL+YLA+DGVAPRAKMNQQRTR
Sbjct: 36 HPCCHPEGPGAVQPATEEEMLDNVGAYLDRLVAAARPTKLVYLALDGVAPRAKMNQQRTR 95
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RF +A++A EA A L G +AK + D N ITPGT+FMA L+A + +
Sbjct: 96 RFCSAREADEAAAATREL---LARRGHRPAAKAR---WDHNAITPGTEFMAKLAAFCRRW 149
Query: 179 IQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
++ + + P Q + VI+SDA PGEGEHKIM +IR + P RH + G DADL+
Sbjct: 150 AESLVARCP--QLS-VIVSDAATPGEGEHKIMDWIRRSQADPDRR-GERHAVCGQDADLM 205
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
LSLA H +LRE + + G + G P
Sbjct: 206 FLSLALHAPRVYVLRERVETRRKPRG-GGKGGPPPEPRKAFGPP---------------- 248
Query: 299 KKKYQFLNIWVLREYLQYELDIPNP-----PFPINFERIVDDFVFLCFFVGNDFLPHMPT 353
+ Q+L+ LR L + + PFP + ER +DDFV LCFFVGNDFLP +P+
Sbjct: 249 --RLQYLSCQRLRRCLIGDASLNAAADGALPFPRDDERFLDDFVLLCFFVGNDFLPQLPS 306
Query: 354 LEIREGAINLLMHVYRREF-TAMGGYLTD 381
L I +G ++LL+ +YRR +GGYLTD
Sbjct: 307 LSIPDGGLDLLLLLYRRALPRHLGGYLTD 335
>gi|7019942|dbj|BAA90934.1| unnamed protein product [Homo sapiens]
Length = 560
Score = 208 bits (529), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 114/250 (45%), Positives = 153/250 (61%), Gaps = 10/250 (4%)
Query: 442 DTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFY 501
D V+L E G+K+RYY +KF++ +E K ++ VV YVEGLCWV RYYYQ SW+W+Y
Sbjct: 117 DNVRLWEAGWKQRYYKNKFDVDAADE--KFRRKVVQSYVEGLCWVLRYYYQGCASWKWYY 174
Query: 502 PYHYAPFASDLKDLSDLEITFFLG-EPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSP 560
P+HYAPFASD + ++D+ F G +PF+P +QLMG PAAS + LP +R LM+DP S
Sbjct: 175 PFHYAPFASDFEGIADMPSDFEKGTKPFKPLEQLMGVFPAASGNFLPPSWRKLMSDPDSS 234
Query: 561 IYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLL 620
I FYP DF ID+NGK++AWQGV LPF+DE+ L +++ LT EE RNS+ D+L
Sbjct: 235 IIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEETRRNSLGGDVL 294
Query: 621 YVHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVNASGGMNGYIWLCERNGL-RSIIPSP 679
+V HPL+ I Q P E+ G+ G L E L I+ SP
Sbjct: 295 FVGKHHPLHDFILELYQTGSTEP------VEVPPELCHGIQGKFSLDEEAILPDQIVCSP 348
Query: 680 VKGLPDIERN 689
V L D+ +N
Sbjct: 349 VPMLRDLTQN 358
>gi|62913987|gb|AAH06417.2| XRN2 protein, partial [Homo sapiens]
Length = 580
Score = 208 bits (529), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 114/250 (45%), Positives = 153/250 (61%), Gaps = 10/250 (4%)
Query: 442 DTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFY 501
D V+L E G+K+RYY +KF++ +E K ++ VV YVEGLCWV RYYYQ SW+W+Y
Sbjct: 137 DNVRLWEAGWKQRYYKNKFDVDAADE--KFRRKVVQSYVEGLCWVLRYYYQGCASWKWYY 194
Query: 502 PYHYAPFASDLKDLSDLEITFFLG-EPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSP 560
P+HYAPFASD + ++D+ F G +PF+P +QLMG PAAS + LP +R LM+DP S
Sbjct: 195 PFHYAPFASDFEGIADMPSDFEKGTKPFKPLEQLMGVFPAASGNFLPPSWRKLMSDPDSS 254
Query: 561 IYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLL 620
I FYP DF ID+NGK++AWQGV LPF+DE+ L +++ LT EE RNS+ D+L
Sbjct: 255 IIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEETRRNSLGGDVL 314
Query: 621 YVHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVNASGGMNGYIWLCERNGL-RSIIPSP 679
+V HPL+ I Q P E+ G+ G L E L I+ SP
Sbjct: 315 FVGKHHPLHDFILELYQTGSTEP------VEVPPELCHGIQGKFSLDEEAILPDQIVCSP 368
Query: 680 VKGLPDIERN 689
V L D+ +N
Sbjct: 369 VPMLRDLTQN 378
>gi|444520441|gb|ELV12993.1| 5'-3' exoribonuclease 2 [Tupaia chinensis]
Length = 669
Score = 207 bits (527), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 99/193 (51%), Positives = 134/193 (69%), Gaps = 3/193 (1%)
Query: 442 DTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFY 501
D V+L E G+K+RYY +KF++ +E K ++ VV YVEGLCWV RYYYQ SW+W+Y
Sbjct: 288 DNVRLWEAGWKQRYYKNKFDVDAADE--KFRRKVVQSYVEGLCWVLRYYYQGCASWKWYY 345
Query: 502 PYHYAPFASDLKDLSDLEITFFLG-EPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSP 560
P+HYAPFASD + ++D+ F G +PF+P +QLMG PAAS + LP +R LM+DP S
Sbjct: 346 PFHYAPFASDFEGIADMPSDFEKGTKPFKPLEQLMGVFPAASGNFLPPSWRKLMSDPDSS 405
Query: 561 IYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLL 620
I FYP DF ID+NGK++AWQGV LPF+DE+ L +++ LT EE RNS+ D+L
Sbjct: 406 IIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEETRRNSLGGDVL 465
Query: 621 YVHPQHPLYQQIT 633
+V HPL+ I+
Sbjct: 466 FVGKHHPLHDFIS 478
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 59/124 (47%), Positives = 86/124 (69%)
Query: 292 VDDTPIHKKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHM 351
D P + ++ FL + VLREYL+ EL + + PF + ER +DD+VF+CFFVGNDFLPH+
Sbjct: 72 ADSLPSAEGEFIFLRLNVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPHL 131
Query: 352 PTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRI 411
P+LEIREGAI+ L+++Y+ GGYLT++G V L RV+ + +V ED IF+KR
Sbjct: 132 PSLEIREGAIDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDD 191
Query: 412 QQAY 415
+ ++
Sbjct: 192 EDSF 195
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Query: 128 EAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQARLNQIP 187
EA E++R+R+E G L +E E DSN ITPGT+FM L+ L+Y+I RLN P
Sbjct: 2 EAAVEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIADRLNNDP 61
Query: 188 GWQ-FTKVILSDANVPGEGE 206
GW+ T L+D+ EGE
Sbjct: 62 GWKNLTHDELADSLPSAEGE 81
>gi|449519150|ref|XP_004166598.1| PREDICTED: 5'-3' exoribonuclease 3-like [Cucumis sativus]
Length = 590
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 108/197 (54%), Positives = 132/197 (67%), Gaps = 2/197 (1%)
Query: 498 QWFYPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDP 557
Q FYPYHYAPFASDLK L +L I+F LG PF+PF+QL+G PAAS+ ALPE+YR LMTD
Sbjct: 95 QRFYPYHYAPFASDLKGLGELNISFNLGTPFKPFNQLLGVFPAASAHALPEQYRKLMTDQ 154
Query: 558 SSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVML 617
+SPI FYP DF++DMNGKR++WQG+ KLPFIDE LL + K+E LTEEE RNS+M
Sbjct: 155 NSPIIDFYPTDFEVDMNGKRYSWQGIAKLPFIDETRLLAEVAKVEHTLTEEEARRNSIMF 214
Query: 618 DLLYVHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVNA--SGGMNGYIWLCERNGLRSI 675
D+L+V HPL I QL +DR + +N S GMNGY+ C I
Sbjct: 215 DMLFVTSSHPLSVSIYSLDNRCKQLAERDRTEVKEKINPEHSEGMNGYLSPCLGELCPPI 274
Query: 676 IPSPVKGLPDIERNQAM 692
SPV+GL DI NQ +
Sbjct: 275 FRSPVEGLEDIIDNQVI 291
>gi|302828800|ref|XP_002945967.1| hypothetical protein VOLCADRAFT_115887 [Volvox carteri f.
nagariensis]
gi|300268782|gb|EFJ52962.1| hypothetical protein VOLCADRAFT_115887 [Volvox carteri f.
nagariensis]
Length = 229
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 113/261 (43%), Positives = 152/261 (58%), Gaps = 58/261 (22%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MG+P FYRWL++RYPL + + + +++ P E DNLYLDMNGII
Sbjct: 1 MGIPKFYRWLSERYPL----------------LNQKLTLTEGPP---EIDNLYLDMNGII 41
Query: 61 HPCFHPDGKP-APTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRR 119
H C H + K + +D+ +FDY++ + +VRP+KLL++AIDGVAPRAKMNQQR+RR
Sbjct: 42 HNCTHANRKDVGNVTEEDMMLKVFDYLEKLIQIVRPQKLLFMAIDGVAPRAKMNQQRSRR 101
Query: 120 FRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFI 179
F++A ERL+ FMA L L++FI
Sbjct: 102 FKSAM---------ERLK-----------------------------FMARLGKHLRFFI 123
Query: 180 QARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIM 239
+ ++ + P WQ V+ S VPGEGEHKIM YIR + P + PN RHC+YGLDADLIM
Sbjct: 124 RRKMAEDPLWQKPTVVFSGHEVPGEGEHKIMEYIRWDKRQPTYAPNQRHCMYGLDADLIM 183
Query: 240 LSLATHEIHFSILREVITLPG 260
LSL +HE HF +LREV++ G
Sbjct: 184 LSLVSHEPHFCLLREVVSYTG 204
>gi|395510133|ref|XP_003759335.1| PREDICTED: 5'-3' exoribonuclease 2-like, partial [Sarcophilus
harrisii]
Length = 349
Score = 206 bits (523), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 112/253 (44%), Positives = 158/253 (62%), Gaps = 10/253 (3%)
Query: 442 DTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFY 501
D V+L E G+K+RYY +KF++ +E K ++ VV YVEGLCWV RYYYQ SW+W+Y
Sbjct: 37 DNVRLWESGWKQRYYKNKFDVDAADE--KFRRKVVQSYVEGLCWVLRYYYQGCASWKWYY 94
Query: 502 PYHYAPFASDLKDLSDLEITFFLG-EPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSP 560
P+HYAPFASD + ++D+ F G PF+P +QLMG PAAS + LP +R LM+DP S
Sbjct: 95 PFHYAPFASDFEGIADMPSDFEKGTRPFKPLEQLMGVFPAASGNFLPPSWRKLMSDPESS 154
Query: 561 IYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLL 620
I FYP DF ID+NGK++AWQGV LPF+DE+ L +++ LT +E RNS+ D++
Sbjct: 155 IIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPDETRRNSLGGDVM 214
Query: 621 YVHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVNASGGMNGYIWLCERNGL-RSIIPSP 679
+V HPL ++ +LY + A ++ G+ G + L E L I+ SP
Sbjct: 215 FVGKHHPLSDFLS---ELYKTGSTE---AVDLPPELCHGIQGKLTLHEEAILPDQIVYSP 268
Query: 680 VKGLPDIERNQAM 692
V L D+ +N A+
Sbjct: 269 VPVLRDLTQNTAI 281
>gi|157817638|ref|NP_001102066.1| 5'-3' exoribonuclease 2 [Rattus norvegicus]
gi|149041187|gb|EDL95120.1| 5'-3' exoribonuclease 2 (predicted), isoform CRA_c [Rattus
norvegicus]
Length = 561
Score = 205 bits (521), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 115/255 (45%), Positives = 155/255 (60%), Gaps = 14/255 (5%)
Query: 442 DTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFY 501
D V+L E G+K+RYY +KF++ +E K ++ VV YVEGLCWV RYYYQ SW+W+Y
Sbjct: 117 DNVRLWEAGWKQRYYKNKFDVDAADE--KFRRKVVQSYVEGLCWVLRYYYQGCASWKWYY 174
Query: 502 PYHYAPFASDLKDLSDLEITFFLG-EPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSP 560
P+HYAPFASD + ++D+ F G +PF+P +QLMG PAAS + LP +R LM+DP S
Sbjct: 175 PFHYAPFASDFEGIADMPSEFEKGTKPFKPLEQLMGVFPAASGNFLPPTWRKLMSDPDSS 234
Query: 561 IYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLL 620
I FYP DF ID+NGK++AWQGV LPF+DE+ L +++ LT EE RNS+ D+L
Sbjct: 235 IIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEENRRNSLGSDVL 294
Query: 621 YVHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDV--NASGGMNGYIWLCERNGL-RSIIP 677
+V HPL+ I Q P +DV G+ G L E L +
Sbjct: 295 FVGKVHPLHDFILELYQTGSTEP--------VDVPPELCHGIQGKFSLDEEAILPDQTVC 346
Query: 678 SPVKGLPDIERNQAM 692
SPV L D+ +N A+
Sbjct: 347 SPVPMLRDLTQNTAI 361
>gi|321466088|gb|EFX77085.1| hypothetical protein DAPPUDRAFT_24169 [Daphnia pulex]
Length = 288
Score = 204 bits (520), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 126/359 (35%), Positives = 178/359 (49%), Gaps = 76/359 (21%)
Query: 48 EFDNLYLDMNGIIHPC-----FHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLA 102
E+DNLY+D+N I+H C FH A + + +F+ ID IF +VRPRKLLY+A
Sbjct: 1 EYDNLYIDLNEIVHNCVRAARFHN----ADDRERRIMEILFEKIDQIFSIVRPRKLLYVA 56
Query: 103 IDGVAPRAKMNQQRTRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVIT 162
+DGVAPRAK QQR RRF +K + EF D N ++
Sbjct: 57 LDGVAPRAKRTQQRIRRFGRSKPNQD----------EF----------------DGNCVS 90
Query: 163 PGTQFMAVLSAALQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGF 222
PGT FM LS L ++ +L+ P W+ VI SD+NVPGEGEHKI +IR QR P
Sbjct: 91 PGTSFMCTLSKNLMLYVDRKLSNDPQWKNISVIFSDSNVPGEGEHKIADFIRQQRTQPCH 150
Query: 223 DPNTRHCLYGLDADLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKP 282
DP T+H + G DADLI+L LA+HE + ++LR G P
Sbjct: 151 DPVTKHVICGNDADLILLGLASHETNVTLLR--------------------------GDP 184
Query: 283 GDNPADWNGVDDTPIHKKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFF 342
+ +K+ F+ I +LRE L E + PF + ERIVDD++FLC
Sbjct: 185 ---------------NSRKWIFVGIHILRECLNEEFRGSDFPFDYHLERIVDDWIFLCIL 229
Query: 343 VGNDFLPHMPTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYE 401
+GNDFLP + + + L+ + + + +LT G + +V+ + + E
Sbjct: 230 LGNDFLPSFQIFKNPDRTLTHLVRICKDAYNKNQDWLTHNGSINSVQVKHIMSELGRME 288
>gi|148696568|gb|EDL28515.1| 5'-3' exoribonuclease 2, isoform CRA_c [Mus musculus]
Length = 725
Score = 204 bits (520), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 115/255 (45%), Positives = 154/255 (60%), Gaps = 14/255 (5%)
Query: 442 DTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFY 501
D V+L E G+K+RYY +KF++ +E K ++ VV YVEGLCWV RYYYQ SW+W+Y
Sbjct: 281 DNVRLWEAGWKQRYYKNKFDVDAADE--KFRRKVVQSYVEGLCWVLRYYYQGCASWKWYY 338
Query: 502 PYHYAPFASDLKDLSDLEITFFLG-EPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSP 560
P+HYAPFASD + ++D+ F G +PF+P +QLMG PAAS + LP +R LM+DP S
Sbjct: 339 PFHYAPFASDFEGIADMSSEFEKGTKPFKPLEQLMGVFPAASGNFLPPTWRKLMSDPDSS 398
Query: 561 IYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLL 620
I FYP DF ID+NGK++AWQGV LPF+DE+ L +++ LT EE RNS+ D+L
Sbjct: 399 IIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEENRRNSLGGDVL 458
Query: 621 YVHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDV--NASGGMNGYIWLCERNGL-RSIIP 677
+V HPL I Q P +DV G+ G L E L +
Sbjct: 459 FVGKLHPLRDFILELYQTGSTEP--------VDVPPELCHGIQGTFSLDEEAILPDQTVC 510
Query: 678 SPVKGLPDIERNQAM 692
SPV L D+ +N A+
Sbjct: 511 SPVPMLRDLTQNTAV 525
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 67/153 (43%), Positives = 101/153 (66%), Gaps = 3/153 (1%)
Query: 266 FVCGQV--GHLAAECHGKPGDNPADWNGVDDT-PIHKKKYQFLNIWVLREYLQYELDIPN 322
VC ++ GH +C G P + + + D+ P + ++ FL + VLREYL+ EL + +
Sbjct: 36 IVCVELMFGHEVKDCEGLPREKKGKHDELADSLPCAEGEFIFLRLNVLREYLERELTMAS 95
Query: 323 PPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHVYRREFTAMGGYLTDA 382
PFP + ER +DD+VF+CFFVGNDFLPH+P+LEIREGAI+ L+++Y+ GGYLT++
Sbjct: 96 LPFPFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREGAIDRLVNIYKNVVHKTGGYLTES 155
Query: 383 GEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAY 415
G V L RV+ + +V ED IF+KR + ++
Sbjct: 156 GYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSF 188
>gi|13278447|gb|AAH04028.1| Xrn2 protein [Mus musculus]
gi|148696567|gb|EDL28514.1| 5'-3' exoribonuclease 2, isoform CRA_b [Mus musculus]
Length = 561
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 115/255 (45%), Positives = 154/255 (60%), Gaps = 14/255 (5%)
Query: 442 DTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFY 501
D V+L E G+K+RYY +KF++ +E K ++ VV YVEGLCWV RYYYQ SW+W+Y
Sbjct: 117 DNVRLWEAGWKQRYYKNKFDVDAADE--KFRRKVVQSYVEGLCWVLRYYYQGCASWKWYY 174
Query: 502 PYHYAPFASDLKDLSDLEITFFLG-EPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSP 560
P+HYAPFASD + ++D+ F G +PF+P +QLMG PAAS + LP +R LM+DP S
Sbjct: 175 PFHYAPFASDFEGIADMSSEFEKGTKPFKPLEQLMGVFPAASGNFLPPTWRKLMSDPDSS 234
Query: 561 IYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLL 620
I FYP DF ID+NGK++AWQGV LPF+DE+ L +++ LT EE RNS+ D+L
Sbjct: 235 IIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEENRRNSLGGDVL 294
Query: 621 YVHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDV--NASGGMNGYIWLCERNGL-RSIIP 677
+V HPL I Q P +DV G+ G L E L +
Sbjct: 295 FVGKLHPLRDFILELYQTGSTEP--------VDVPPELCHGIQGTFSLDEEAILPDQTVC 346
Query: 678 SPVKGLPDIERNQAM 692
SPV L D+ +N A+
Sbjct: 347 SPVPMLRDLTQNTAV 361
>gi|195338779|ref|XP_002036001.1| GM16250 [Drosophila sechellia]
gi|194129881|gb|EDW51924.1| GM16250 [Drosophila sechellia]
Length = 431
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 109/248 (43%), Positives = 147/248 (59%), Gaps = 12/248 (4%)
Query: 444 VKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPY 503
V+L E G+K+RYY KF+++ + + + V L+YV GLCWV +YYYQ SW W++PY
Sbjct: 16 VRLWEDGFKDRYYESKFDVAPGNQ--QFRYAVALQYVRGLCWVLKYYYQGCASWNWYFPY 73
Query: 504 HYAPFASDLKDLSDLEITFFLG-EPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIY 562
HYAPFASD ++ L F G +PF P +QLMG PAASSS +PE + LM+DP SPI
Sbjct: 74 HYAPFASDFVNIQGLSTMFEKGTKPFNPLEQLMGVFPAASSSHVPEPWAKLMSDPESPII 133
Query: 563 KFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYV 622
FYP DF+ID+NGK+FAWQGV LPF+DEK L + LT EE+ RN + LY+
Sbjct: 134 DFYPEDFKIDLNGKKFAWQGVALLPFVDEKRLFKALVPYYDQLTGEEVKRNKRGDNYLYI 193
Query: 623 HPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVNASGGMNGYIWLCERN-GLRSIIPSPVK 681
Q P Y+++ + + I + GM G + E N + I+ SP+
Sbjct: 194 SNQSPHYKKVKKVSE-----KDDESVCKAISFD---GMRGTLGSTELNTAISGILKSPIS 245
Query: 682 GLPDIERN 689
GL DI N
Sbjct: 246 GLSDINDN 253
>gi|321466089|gb|EFX77086.1| hypothetical protein DAPPUDRAFT_31800 [Daphnia pulex]
Length = 288
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 125/359 (34%), Positives = 178/359 (49%), Gaps = 76/359 (21%)
Query: 48 EFDNLYLDMNGIIHPC-----FHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLA 102
++DNLY+D+N I+H C FH A + + +F+ ID IF +VRPRKLLY+A
Sbjct: 1 DYDNLYIDLNEIVHNCVRAARFHK----ADDRERRIMEILFEKIDQIFSIVRPRKLLYVA 56
Query: 103 IDGVAPRAKMNQQRTRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVIT 162
+DGVAPRAK QQR RRF +K + EF D N ++
Sbjct: 57 LDGVAPRAKRTQQRIRRFGRSKPNQD----------EF----------------DGNCVS 90
Query: 163 PGTQFMAVLSAALQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGF 222
PGT FM LS L ++ +L+ P W+ VI SD+NVPGEGEHKI +IR QR P
Sbjct: 91 PGTSFMCTLSKNLMLYVDRKLSNDPQWKNISVIFSDSNVPGEGEHKIADFIRQQRTQPCH 150
Query: 223 DPNTRHCLYGLDADLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKP 282
DP T+H + G DADLI+L LA+HE + ++LR G P
Sbjct: 151 DPVTKHVICGNDADLILLGLASHETNVTLLR--------------------------GDP 184
Query: 283 GDNPADWNGVDDTPIHKKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFF 342
+ +K+ F+ I +LRE L E + PF + ERIVDD++FLC
Sbjct: 185 ---------------NSRKWIFVGIHILRECLNEEFRGSDFPFDYHLERIVDDWIFLCIL 229
Query: 343 VGNDFLPHMPTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYE 401
+GNDFLP + + + L+ + + + +LT G + +V+ + + E
Sbjct: 230 LGNDFLPSFQIFKNPDRTLTHLVRICKDAYNKNQDWLTHNGSINSVQVKHIMSELGRME 288
>gi|224587081|gb|ACN58600.1| 5-3 exoribonuclease 2 [Salmo salar]
Length = 575
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 96/188 (51%), Positives = 130/188 (69%), Gaps = 3/188 (1%)
Query: 442 DTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFY 501
D V+L E G+K+RYY KF++ + D +K VV+ YVEGLCWV RYYYQ SW+W++
Sbjct: 123 DNVRLWEDGWKQRYYKTKFDVDATD--DDFRKKVVMSYVEGLCWVLRYYYQGCASWKWYF 180
Query: 502 PYHYAPFASDLKDLSDLEITFFLG-EPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSP 560
P+HYAPFASD KD+ + F LG +PF+P +QLMG PAAS + LPE +R+LM++P S
Sbjct: 181 PFHYAPFASDFKDIKGMFTDFELGTKPFKPLEQLMGVFPAASGNFLPETWRSLMSNPESS 240
Query: 561 IYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLL 620
I FYP DF ID+NGK++AWQGV LPF+DE+ L ++ L+ EE RNS+ D+L
Sbjct: 241 IIDFYPDDFAIDLNGKKYAWQGVALLPFVDERRLRAALAEVYPNLSPEENKRNSLGSDML 300
Query: 621 YVHPQHPL 628
+V H +
Sbjct: 301 FVGKSHSI 308
>gi|440492471|gb|ELQ75035.1| 5'-3' exonuclease HKE1/RAT1 [Trachipleistophora hominis]
Length = 606
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 134/450 (29%), Positives = 211/450 (46%), Gaps = 52/450 (11%)
Query: 148 SAKEKPETCDSNVITPGTQFMAVLSAALQYFIQARLNQIPGWQFTKVILSDANVPGEGEH 207
S+ + E D N ITPGT+FM L + FI+ RL P ++ I S+ GEGE
Sbjct: 194 SSLTEDEAFDKNAITPGTRFMYDLEKRMDKFIRERLANNPMYKNLCFIYSNGRRAGEGEQ 253
Query: 208 KIMSYIRLQRNLPGFDPNTRHCLYGLDADLIMLSLATHEIHFSILREVITLP--GQQEKC 265
KIM+ IR +N N +H +Y DADLI L + H + I+RE + +Q C
Sbjct: 254 KIMTLIRKMKN-----RNLKHTIYSPDADLIFLGTSLHGRNVKIMREDLEFVYLQRQHFC 308
Query: 266 FVCGQVGHLAAECHGKPGDNPADWNGVDDTPIHKKKYQFLNIWVLREYLQYELDIPNPPF 325
CG+ GHL+ C + A ++ + F ++ VL+ L EL +
Sbjct: 309 EKCGKKGHLSTYC-----NKLALFSCI-----------FFDLIVLKRILSEELSMLITT- 351
Query: 326 PINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHVYRREFTAMGGYLTDAGEV 385
F R+ DD++ + F GNDFLP + ++R AI +L + F Y+T GE+
Sbjct: 352 SYEFNRMADDWILMSFLAGNDFLPTLQCFDVRFEAIEILTKLLAENFNRTKKYITYKGEI 411
Query: 386 LLDRVEKFIQSVAVYEDQIFQKRTRIQQAYEYNEAMKLNARRESSEELLQAPVAVADTVK 445
++ F + +A YED ++ K+ ++ + RR + + +
Sbjct: 412 DFAVLKNFFRILAHYEDHLYIKKKKLLT----------DTRRRFQIK------GFFENIS 455
Query: 446 LGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHY 505
L K RYY K + + E+ V ++ Y+ GL WV +YY + +W+WFYPY Y
Sbjct: 456 LETTYGKTRYYDTKLHLKSEREVITVCRE----YILGLSWVFKYYVKGATNWEWFYPYDY 511
Query: 506 APFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFY 565
APFA D+ ++ + EP Q M +P S +P++ PI+ +
Sbjct: 512 APFACDIANVRSMPYLNKRTEPLDCLQQQMLVMPPQSKGLVPKEMH--------PIFDSF 563
Query: 566 PPDFQIDMNGKRFAWQGVVKLPFIDEKLLL 595
P + +IDM K WQGV LP ID ++++
Sbjct: 564 PTEIKIDMFDKLLPWQGVAILPIIDMEIIV 593
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 65/128 (50%), Gaps = 22/128 (17%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP+ +RWL +YP I ++P D LY+D N II
Sbjct: 1 MGVPSLFRWLTKKYPQIIEKATPKNPT----------------------DILYIDFNAII 38
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
H P P P + D++ +I ID I PRK++ ++ DGVAPRAK+NQQR RR+
Sbjct: 39 HISCTPSDGPTPVNEDEMMNNIEKNIDSIVSKCLPRKMIVISTDGVAPRAKLNQQRARRY 98
Query: 121 RAAKDAAE 128
R+ +A E
Sbjct: 99 RSIIEALE 106
>gi|349604424|gb|AEP99978.1| 5'-3' exoribonuclease 1-like protein, partial [Equus caballus]
Length = 514
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 127/380 (33%), Positives = 189/380 (49%), Gaps = 52/380 (13%)
Query: 325 FPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHVYRR-EFTAMGGYLTDAG 383
F + ERI+DD++ + F VGNDF+PH+P L I A+ LL Y +GGY+ ++G
Sbjct: 13 FKYDIERIIDDWILMGFLVGNDFIPHLPHLHINHDALPLLYGTYILPSCQNLGGYINESG 72
Query: 384 EVLLDRVEKFIQSVAVYEDQIFQK--------RTRIQQAY-------------EYNEAMK 422
+ L R EK++ ++ ++ + F + +++ Y Y E K
Sbjct: 73 HLNLPRFEKYLVKLSDFDREHFSEVFVDLKWFESKVGNKYLNEAAGVAAEEAKSYKEKRK 132
Query: 423 LNARRES---------SEELLQAPVAVADTVKLGE------PGYKERYYADKFEISNPEE 467
+ S EE++ + V D + + YK YY K +
Sbjct: 133 SKDQENSICWAALDTNGEEVVASKDNVEDETEDDDLFETEFRQYKRTYYMTKMGVDVVS- 191
Query: 468 IDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDLEITFFLGEP 527
D D YV+ + W+ YYY V SW W+YPYHYAPF SD++++S L I F LG+P
Sbjct: 192 -DDFLADQAACYVQAIQWILHYYYHGVQSWSWYYPYHYAPFLSDIRNISALSIHFELGKP 250
Query: 528 FRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLP 587
F+PF+QL+ LPAAS + LP Y++LMT SPI ++YPPDF+ D+NGK+ W+ VV +P
Sbjct: 251 FKPFEQLLAVLPAASKNLLPTCYQHLMTSEDSPIIEYYPPDFKTDLNGKQQEWEAVVLIP 310
Query: 588 FIDEKLLLRQTKKLEVFLTEEELFRN----SVML------DLLYVHPQHPLYQQITLYCQ 637
FIDEK LL + L +EE RN +M + Y P + I C
Sbjct: 311 FIDEKRLLEAMETCNHSLKKEERKRNRHSECLMCWYDRDTEFTYPSPWPEKFPAIERCCT 370
Query: 638 LYHQLPPQDRFAWEIDVNAS 657
Y + AW +D+N +
Sbjct: 371 RYKMISLD---AWRVDINKN 387
>gi|157111508|ref|XP_001651597.1| 5'-3' exoribonuclease, putative [Aedes aegypti]
gi|108868328|gb|EAT32553.1| AAEL015316-PA, partial [Aedes aegypti]
Length = 188
Score = 201 bits (512), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 109/189 (57%), Positives = 136/189 (71%), Gaps = 2/189 (1%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPAF+RWL+ +YP IV+ VE+ Q D G D+++PNPN +EFDNLYLDMNGII
Sbjct: 1 MGVPAFFRWLSRKYPSVIVECVEQK-QTDEHGNPLYDDMTQPNPNKVEFDNLYLDMNGII 59
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ KPAP D++ +IF+ ID + +VRPRKLLY+AIDGVAPRAKMNQQR+RRF
Sbjct: 60 HPCTHPEDKPAPKDEDEMMVAIFECIDRLMNIVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLL-SAKEKPETCDSNVITPGTQFMAVLSAALQYFI 179
RA+K+AAE AE +++R E G +L KEK DSN ITPGT FM LS LQY++
Sbjct: 120 RASKEAAEKAAEVQKIRDELRAKGCILPPEKEKGAHFDSNCITPGTPFMDRLSKCLQYYV 179
Query: 180 QARLNQIPG 188
R+N G
Sbjct: 180 HDRMNNYRG 188
>gi|324502945|gb|ADY41287.1| 5'-3' exoribonuclease 2 [Ascaris suum]
Length = 578
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 141/402 (35%), Positives = 191/402 (47%), Gaps = 79/402 (19%)
Query: 365 MH--VYRREFTAMG---GYLTDAGEVLLDRVEKFIQSVAVYEDQIFQ------------- 406
MH VY R G YLT+ G+V +DRV+K + + ED+IF+
Sbjct: 1 MHRVVYIRAMIRCGYIFSYLTNQGDVYMDRVQKILNGLGEVEDEIFKSRQQKELQFRERN 60
Query: 407 --KRTRIQ---------------------------------------QAYEYNEA----- 420
KR R + QA EY A
Sbjct: 61 KAKRRRERAATTPAYIPVRGSLLAPQANGPVSFSGADTRRLARDARVQAMEYQNASSKAN 120
Query: 421 -----MKLNARRESSEELLQAPVAVADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDV 475
++ + R+ E + V D V+L E G+KERYY KFE+ + + K V
Sbjct: 121 TVVTTVQASGPRKRKMEDSDSEEEVYDEVRLWETGWKERYYRSKFEVDGNDIAFRHK--V 178
Query: 476 VLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDLEITFFL-GEPFRPFDQL 534
YVEGLCWV +YYYQ SW W++PYHYAPFASD +S + F EPF+P +QL
Sbjct: 179 AWAYVEGLCWVLKYYYQGCVSWNWYFPYHYAPFASDFDTISQFKPDFSAHTEPFKPLEQL 238
Query: 535 MGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLL 594
M PAAS LPE +++LMT SPI FYP DFQ+D+NGK++AWQGV LPF+DE L
Sbjct: 239 MAVFPAASKKHLPESWQDLMTSEESPIIDFYPEDFQVDLNGKKYAWQGVALLPFVDEHRL 298
Query: 595 LRQTKKLEVFLTEEELFRNSVMLDLLYVHPQHPLYQQITLYCQLYHQLPPQDRFAW-EID 653
L + L + E RNS D ++V +HP + + QLY P++ ID
Sbjct: 299 LETLATVYDKLDDFERERNSRGPDRIFVGRKHPFSKFLQ---QLYEGSCPENEGTLIAID 355
Query: 654 VNASGGMNGYIWL---CERNGLRSIIPSPVKGLPDIERNQAM 692
+ + G+ G + + R G R P P+ PDI N A+
Sbjct: 356 PSFTNGLAGSVGVDSKVVRIGERYHSPIPLDCCPDIPSNSAI 397
>gi|195164006|ref|XP_002022840.1| GL14782 [Drosophila persimilis]
gi|194104863|gb|EDW26906.1| GL14782 [Drosophila persimilis]
Length = 1039
Score = 198 bits (503), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 108/297 (36%), Positives = 168/297 (56%), Gaps = 22/297 (7%)
Query: 338 FLCFFVGNDFLPHMPTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSV 397
+ F VGNDF+PH+P L I A+ LL Y R + ++GG + + G++ L R++ F+ ++
Sbjct: 112 LMGFMVGNDFIPHLPCLHISSNALPLLYKTYIRIYHSLGGNINEHGKLNLQRLQIFMTAL 171
Query: 398 AVYE-DQIFQKRTRIQQAYEYNEAMKLNARRESSEELLQAPVA--VADTVKLGE------ 448
+ E +Q + ++ A EA ++ SS + + + + D+ +L
Sbjct: 172 SEVELEQYKEHADDLKYANGNTEAFDIDVGEISSSKDYDSDLKALIDDSTQLYNDDSDED 231
Query: 449 ------------PGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCS 496
YK YY +KF +S+ +++ +++ YV L W+ YYY+ V S
Sbjct: 232 LSDEEAGVLKDFQNYKRNYYRNKFNLSS-RPPNQLIEELGHHYVTALQWILDYYYRGVQS 290
Query: 497 WQWFYPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTD 556
W W+YP+HYAPF SDL +++ ++I F LG PF PF+QL+G LPAAS LP Y +LM
Sbjct: 291 WDWYYPFHYAPFISDLNNIATVQIKFQLGTPFLPFEQLLGVLPAASFKLLPTAYHDLMLK 350
Query: 557 PSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRN 613
P+SP+ +FYP DF+ D+NGK+ W+ VV +PFIDE LLL + E L+ E RN
Sbjct: 351 PTSPLAEFYPTDFKSDLNGKKNDWEAVVLIPFIDECLLLSVMRACEAHLSTAERARN 407
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 59/125 (47%), Positives = 82/125 (65%), Gaps = 22/125 (17%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP F+R++++RYP + ++ E S P EFDNLYLDMNGI+
Sbjct: 1 MGVPKFFRYISERYP-CLSELAREH--------------SIP-----EFDNLYLDMNGIV 40
Query: 61 HPCFHPDGKPAPTSYDD--VFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C HPD ++ +F+ IF+Y+D +F L++P+KL +LA+DGVAPRAKMNQQR+R
Sbjct: 41 HNCSHPDDNNIHFHLEEQQIFQDIFNYVDKLFYLIKPQKLFFLAVDGVAPRAKMNQQRSR 100
Query: 119 RFRAA 123
RFR+A
Sbjct: 101 RFRSA 105
>gi|402588112|gb|EJW82046.1| hypothetical protein WUBG_07043 [Wuchereria bancrofti]
Length = 442
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 110/255 (43%), Positives = 145/255 (56%), Gaps = 10/255 (3%)
Query: 442 DTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFY 501
D V+L E G+K+RYY KF++ + + ++ V L YVEGLCWV YYYQ SW W+Y
Sbjct: 17 DEVRLWEDGWKDRYYKSKFQVDGKDIV--FRRKVALAYVEGLCWVLHYYYQGCASWDWYY 74
Query: 502 PYHYAPFASDLKDLSDLEITF-FLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSP 560
P+HYAPFASD +S + F EPF+P QLMG PAAS LPE ++ LM P SP
Sbjct: 75 PFHYAPFASDFDAVSQFKPDFSAYTEPFKPLQQLMGVFPAASRMHLPEAWQELMISPVSP 134
Query: 561 IYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLL 620
I FYP +F ID+NGK+ AWQGV LPF+DEK LL K +E L E RNS D L
Sbjct: 135 IIDFYPDNFVIDLNGKKCAWQGVALLPFVDEKRLLEVLKPMEDKLDAFEKERNSRGPDRL 194
Query: 621 YVHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVNASGGMNGYIWLCER---NGLRSIIP 677
+V P HP Y + + ++ +D ID + + GM G + + + G P
Sbjct: 195 FVGPSHPFYN----FAEALYESGRKDSTDLAIDTSLTFGMAGTVGVDAKAIMKGQNYKSP 250
Query: 678 SPVKGLPDIERNQAM 692
V DI +N+A+
Sbjct: 251 LSVDEFTDIAKNKAI 265
>gi|358378678|gb|EHK16359.1| hypothetical protein TRIVIDRAFT_8924, partial [Trichoderma virens
Gv29-8]
Length = 189
Score = 196 bits (498), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 91/189 (48%), Positives = 130/189 (68%), Gaps = 5/189 (2%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MG+PA +RWL+++YP I V+E+ P +G+ PVD ++PNPNG E DNLYLDMNGI+
Sbjct: 1 MGIPAAFRWLSNKYPKIISPVIEQTPITTEDGITIPVDTTQPNPNGEELDNLYLDMNGIV 60
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ +PAP +++ +F Y D + +VRPRK+L +A+DGVAPRAKMNQQR+RRF
Sbjct: 61 HPCSHPEDRPAPADEEEMMLEVFRYTDRVVNMVRPRKILMIAVDGVAPRAKMNQQRSRRF 120
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETC-----DSNVITPGTQFMAVLSAAL 175
R+A++A E E +++ L + + + ET DSN ITPGT FM +L+ +L
Sbjct: 121 RSAREAQEKEEDKKALIELLKRQNGGVFPAADSETVVKKAFDSNSITPGTPFMDILALSL 180
Query: 176 QYFIQARLN 184
+Y+ Q +LN
Sbjct: 181 RYWCQYKLN 189
>gi|68068571|ref|XP_676196.1| exoribonuclease [Plasmodium berghei strain ANKA]
gi|56495779|emb|CAH94068.1| exoribonuclease, putative [Plasmodium berghei]
Length = 1136
Score = 196 bits (497), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 115/300 (38%), Positives = 164/300 (54%), Gaps = 37/300 (12%)
Query: 157 DSNVITPGTQFMAVLSAALQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQ 216
DSN+ITPGTQFM LS AL+YFI+ ++ W+ VI SDANV GEGEHKI ++I+ Q
Sbjct: 17 DSNIITPGTQFMHELSVALKYFIEHKITNDEKWKKIVVIFSDANVCGEGEHKIYNFIKSQ 76
Query: 217 RNLPGFDPNTRHCLYGLDADLIMLSLATHEIHFSILREVITL-PGQQEKCFVCGQ-VGHL 274
R G+DPNTRH ++G+DADLIMLSLA+HE +F ILRE+I L P ++ K V VG
Sbjct: 77 RAQKGYDPNTRHVIHGMDADLIMLSLASHEPYFYILREIINLDPKEENKPQVKDNYVGVF 136
Query: 275 AAE-----------------------------CHGKPGDNPADWNGVDDTPIHKKKY--- 302
+ C+ N A+ N I+ + +
Sbjct: 137 KGKGDLQYCTKFLRNNNSTTIDGNSNKGKKKYCNKYNDRNYANINISSTCSINYENWNEL 196
Query: 303 QFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGAIN 362
Q L++ +LREYL + N ER +DDF+F+CF GNDFLPH+P++ I G+I+
Sbjct: 197 QILDLTILREYLYKDFFF---DAKYNLERCIDDFIFICFLCGNDFLPHLPSISIASGSID 253
Query: 363 LLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYEYNEAMK 422
L+ +Y++ F +G YL + G + K+I +A E + F + ++ E E K
Sbjct: 254 QLLLLYQKVFPVLGDYLINEGSMNFQSFIKYISFIAEVERETFVSQYDFKKKREKRELQK 313
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 82/208 (39%), Positives = 127/208 (61%), Gaps = 2/208 (0%)
Query: 452 KERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASD 511
+ RYY KF + + +D+ ++VV KY+EGL WV YY+Q+ W W+YPY+YAP +SD
Sbjct: 551 RARYYKSKFHLDENDNVDEFVQEVVYKYIEGLAWVLCYYFQECPMWHWYYPYYYAPLSSD 610
Query: 512 LKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQI 571
L + D+ I+F EP PF+QL+ LP+ SS LP+ YR LM SPI FYP F+
Sbjct: 611 LL-IKDINISFEKDEPLLPFEQLLCVLPSNSSHCLPKMYRELMLKSESPIIDFYPKTFKE 669
Query: 572 DMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVHPQHPLYQQ 631
+ NGK+F +Q +V LPF++++ ++R + L+ LT+EE RN L+ +Y+ H L ++
Sbjct: 670 EENGKKFKYQWIVLLPFVEKERIIRFARNLDDTLTDEEKKRNRRGLNKIYMSSTHTLSKK 729
Query: 632 ITLYCQLY-HQLPPQDRFAWEIDVNASG 658
IT + Y ++ +++ EI G
Sbjct: 730 ITTSMRTYIKEIKDKEKTVEEIGTENRG 757
>gi|384483989|gb|EIE76169.1| hypothetical protein RO3G_00873 [Rhizopus delemar RA 99-880]
Length = 1163
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 122/412 (29%), Positives = 209/412 (50%), Gaps = 85/412 (20%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEE-DPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGI 59
M +P ++ +RYPLS + E+ P+ D D+ + FD Y +N
Sbjct: 3 MIIPKLVEFVCERYPLSSQVITEQYIPEFD------ITDIVYNSCQTNSFDR-YHRLNE- 54
Query: 60 IHPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRR 119
+ + IF+ I +I+ ++P+K+ +L +DGV PR KMNQ+R+++
Sbjct: 55 ----------------EQILPRIFNKICYIYGQIKPKKIFFLTVDGVTPRIKMNQERSKQ 98
Query: 120 FRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFI 179
F++AK++ K +P ++V+ PGT FMA L+A L+Y +
Sbjct: 99 FQSAKESL---------------------IKREPL---ADVVLPGTAFMAKLTAQLRYLV 134
Query: 180 QARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIM 239
++++ W+ +VI+S +VPGE +HKI YIRL ++ +DPNT+HC+YG+ DL++
Sbjct: 135 AKKISEDIEWRDVEVIVSGPDVPGESKHKIAEYIRLCKSQADYDPNTKHCMYGIRDDLLL 194
Query: 240 LSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIHK 299
+SLATHE +F++ VC Q D D+ K
Sbjct: 195 VSLATHEPNFAL---------------VCEQ----------------DDAQNADERK--K 221
Query: 300 KKYQFLNIWVLREYLQYELDI--PNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIR 357
+Y L++ ++RE L+ E + PF +FERI+DDFV L ND LP + L++
Sbjct: 222 SQYFLLHLSLIRECLEREFSSLKSSLPFKYDFERILDDFVLLSLITSNDLLPRLSGLQVN 281
Query: 358 EGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEK-FIQSVAVYEDQIFQKR 408
G +N+LM +Y+ Y+ + G++ L R+EK F ++ + E ++F+++
Sbjct: 282 RGGLNILMKIYKEVLPTCDDYIQNGGQITLTRLEKIFARASTIVESKLFEEQ 333
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/140 (40%), Positives = 74/140 (52%), Gaps = 1/140 (0%)
Query: 475 VVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDLE-ITFFLGEPFRPFDQ 533
V Y+ + + +YYQ + SW+WFYPYHYAP SDLKDL + F +PF +
Sbjct: 522 AVASYILSIQLINSFYYQGILSWRWFYPYHYAPKLSDLKDLGRFQGFNFPADQPFTLHEY 581
Query: 534 LMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKL 593
LM LP +P Y+ LMTD SPI FYP F D N + + K+PF+DEK
Sbjct: 582 LMAVLPPCHKRLVPVPYQGLMTDYKSPISLFYPTRFYTDFNKNDLDEECIPKIPFVDEKQ 641
Query: 594 LLRQTKKLEVFLTEEELFRN 613
LL + + L E EL N
Sbjct: 642 LLEAIQSKQGLLREHELRSN 661
>gi|440298458|gb|ELP91094.1| 5'->3' exoribonuclease, putative [Entamoeba invadens IP1]
Length = 608
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 177/646 (27%), Positives = 286/646 (44%), Gaps = 107/646 (16%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP+ +++L P D D S+PNPNG E+DNLY+D+NG+I
Sbjct: 1 MGVPSLFKYLCRLVPNFTRRARWNDD----------FDFSQPNPNGREYDNLYIDLNGLI 50
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
H G T+ + +S+ I + +VRPR LL+++IDGV P AKM QQR RRF
Sbjct: 51 H------GSLDYTTIEQTIESLNQKILELVSIVRPRSLLFISIDGVCPVAKMVQQRKRRF 104
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQ 180
P+ D N ITPGT FM +S ++ FI
Sbjct: 105 -------------------------------TPDNEDGNKITPGTDFMEKISTGVESFIL 133
Query: 181 ARLNQIPGWQF--TKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
+++N + F K I+S + PGEGEHKI+ +IR Q+ + H + G DADL+
Sbjct: 134 SQMNNVGLDYFRRIKTIVSGVHSPGEGEHKIIEFIRSQKRV-----TESHVICGEDADLL 188
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
+LSL H + ILR+ Q + G A+ + P D +
Sbjct: 189 LLSLTLHTDNIFILRKFTPPTKQYSRPKKNGHGHAKVAKDKSAKSEKPQK----SDVQL- 243
Query: 299 KKKYQFLNIWVLREYL-QYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIR 357
+ F+NI +L L ++ IN ++ +DFVFL GNDF+P++P +++
Sbjct: 244 ---FDFVNITLLSNKLVSMSAEMGKE---INRTQLENDFVFLMSLAGNDFVPNVPGVDVY 297
Query: 358 EGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQ----- 412
G+ + + Y + ++ G +LT ++ ++F++ + E+ + + R +
Sbjct: 298 SGSFKMALTCYFK-LSSGGVFLTKNDDINFPAFKEFLEKLRENEEMMVKTMVRTRTTTCP 356
Query: 413 --QAYEYNEAMKLNARRESSEELLQAPVAVADTVKLGEPGYKERYYADKFEISNPEEIDK 470
Y + KL V++GE ++ RY F+ SN E +
Sbjct: 357 GVTGYVTKDTNKL--------------------VRIGEANWRSRYEKVLFQ-SNEEYM-- 393
Query: 471 VKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDLEITFFL--GEPF 528
K V +Y++G+ WV YY SW++ Y YAP + L +++I + P
Sbjct: 394 --KRGVKEYIKGIVWVYLYYTGHPISWEFGYRPFYAPTLTMLNTYFEVDIKEVITPTPPL 451
Query: 529 RPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGV--VKL 586
P QL+ LP SS LP + + + + P ID+NG+ ++G+ V
Sbjct: 452 SPLVQLVLVLPPKSSRFLPLPLQTIFEE--DWFSEISPKKPTIDLNGECVGYKGIPLVNF 509
Query: 587 PFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVHPQHPLYQQI 632
P I+ + LT E R+ V+ D+L+V P + +
Sbjct: 510 PSIERAKEYVNARISS--LTPLEKARDRVLDDILFVFNGIPNFGNV 553
>gi|281206450|gb|EFA80636.1| 5'-3' exoribonuclease [Polysphondylium pallidum PN500]
Length = 538
Score = 192 bits (488), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 114/255 (44%), Positives = 156/255 (61%), Gaps = 38/255 (14%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP F+RW+++RYP I ++V D + P E+DNLYLDMNGII
Sbjct: 262 MGVPRFFRWVSERYPQIIQNLV---------------DSTAP-----EYDNLYLDMNGII 301
Query: 61 HPCFHPDGKPAPT-SYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRR 119
H C T S +++ + + +YID +F ++RP+KLLY+AIDGVAPR+K+NQQR RR
Sbjct: 302 HACSQEISNSLLTFSEEELIRKVCNYIDKLFHIIRPKKLLYMAIDGVAPRSKLNQQRQRR 361
Query: 120 FRAA--KDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDS-NVITPGTQFMAVLSAALQ 176
F + +D A+ + E KE PE S ITPGT+FM+ LS LQ
Sbjct: 362 FLSVFLEDKAKQKMISE--------------GKEIPEVIFSRTAITPGTEFMSNLSDCLQ 407
Query: 177 YFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDAD 236
+FI+ ++N+ W+ ++I S PGEGEHKI+ YIR + P +DPN HCLYGLDAD
Sbjct: 408 FFIKKKINEDMSWREVEIIFSGPENPGEGEHKIIDYIRKNKASPDWDPNQSHCLYGLDAD 467
Query: 237 LIMLSLATHEIHFSI 251
LI+L+L THE HF++
Sbjct: 468 LILLALVTHEPHFNL 482
>gi|70933012|ref|XP_737941.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56513750|emb|CAH81056.1| hypothetical protein PC000391.04.0 [Plasmodium chabaudi chabaudi]
Length = 314
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 113/308 (36%), Positives = 162/308 (52%), Gaps = 43/308 (13%)
Query: 157 DSNVITPGTQFMAVLSAALQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQ 216
DSN+ITPGTQFM LS AL+YFI+ ++ W+ VI SDANV GEGEHKI ++I+ Q
Sbjct: 7 DSNIITPGTQFMHELSIALKYFIEHKITNDEKWKKIVVIFSDANVCGEGEHKIYNFIKSQ 66
Query: 217 RNLPGFDPNTRHCLYGLDADLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAA 276
R G+DPNTRH ++G+DADLIMLSLA+HE +F ILRE+I L +++ QV
Sbjct: 67 RAQKGYDPNTRHVIHGMDADLIMLSLASHEPYFYILREIINLDQKEDD---KPQVKDKYV 123
Query: 277 ECHGKPGD----------------------------------NPADWNGVDDTPIHKKKY 302
GD N A+ N I+ + +
Sbjct: 124 GVFKGKGDLQYCTKFMKSNNSTTTDGTNNKGKKKNCNKYNDRNYANINMSSTCSINYENW 183
Query: 303 ---QFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREG 359
Q L++ +LREYL + N ER +DDF+F+CF GNDFLPH+P++ I G
Sbjct: 184 NELQILDLTILREYLYKDFFFDT---KYNLERCIDDFIFICFLCGNDFLPHLPSISIASG 240
Query: 360 AINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYEYNE 419
+I+ L+ +Y++ +G YL + G + K+I +A E + F + ++ E E
Sbjct: 241 SIDQLILLYQKVLPVLGDYLINEGSMNFQAFTKYISFIAEVERETFVSQYDFKKKREKRE 300
Query: 420 AMKLNARR 427
K +R
Sbjct: 301 LQKDAFKR 308
>gi|156086892|ref|XP_001610853.1| 5'-3' exonuclease [Babesia bovis T2Bo]
gi|154798106|gb|EDO07285.1| 5'-3' exonuclease, putative [Babesia bovis]
Length = 509
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 152/592 (25%), Positives = 264/592 (44%), Gaps = 137/592 (23%)
Query: 50 DNLYLDMNGIIHPCFHPDGKPA-PTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAP 108
D+LY+DMN +IH H + P + + + I I+ +F +VRPRK+LY+A+DGV P
Sbjct: 26 DHLYMDMNAVIHVATHGNISPVVQMANEQRLRRITSAIEMMFDIVRPRKMLYMAVDGVCP 85
Query: 109 RAKMNQQRTRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKP------ETCDSNVIT 162
AK+NQQR RRF +K+ + + E G AK P + + N I+
Sbjct: 86 TAKINQQRGRRFLTSKNV---DPLADICSAVSAEDGYTYIAKRLPFDEYDNVSFNPNYIS 142
Query: 163 PGTQFMAVLSAALQYFIQARLNQIPGWQFTKVILS--DANVPGEGEHKIMSYIRLQRNLP 220
PGT FM ++ + + ++ + + G+ F K +++ VPGEGEHKI IR +
Sbjct: 143 PGTDFMKIVDSEISNWLALKTEE--GF-FGKCMVTYNGVTVPGEGEHKIFQCIRKMNKVC 199
Query: 221 GFDPNTRHCLYGLDADLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHG 280
H +YGLDADL+MLS+A + +LRE E+ + H+ ++ G
Sbjct: 200 KRSRKDVHLVYGLDADLMMLSMAVKMPNIKVLRE--------ERNYA----PHVVSKKKG 247
Query: 281 KPGDNP-------ADWNGVDDTPIH----------KKKYQFLNIWVLREY---LQYELDI 320
+P + W+ +D H K+ Y+ +++R+Y L+
Sbjct: 248 EPYFSTDTGIVHLHKWDFIDLKKTHFEVASLHSLRKRMYERCWGYIMRKYGPSSSSFLNR 307
Query: 321 PNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHVYRREFTAMGGYLT 380
P P+ RI DDFV L F GNDFLP +PT+++ + ++ Y G+LT
Sbjct: 308 PEAPY-----RITDDFVLLSFLAGNDFLPRLPTVDLANDSFKQMLVTYYGLMHKWQGFLT 362
Query: 381 DAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYEYNEAMKLNARRESSEELLQAPVAV 440
D ++ + R++ +S+A +E + F+++ I+ EY++ KL
Sbjct: 363 DGSKIHVPRLQTLFKSLAKHEMEWFKEKGIIEGVPEYSDR-KL----------------- 404
Query: 441 ADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWF 500
Y + Y+ +K ++ + + K + + Y++GL W+ YY+ D SW W
Sbjct: 405 ----------YADYYHENKCQVDSKANV----KKMCIDYIKGLFWILIYYHHDCPSWDW- 449
Query: 501 YPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSP 560
L A++
Sbjct: 450 ------------------------------------KLSASTGE---------------- 457
Query: 561 IYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFR 612
+ +++P +F+I+ +G+ W+ VVKLPF++ + L++ +K L L++
Sbjct: 458 LRQYFPTEFEINEDGRIHEWEHVVKLPFVNTQKLVKAAQKANPGLKYSSLYK 509
>gi|351706558|gb|EHB09477.1| 5'-3' exoribonuclease 2 [Heterocephalus glaber]
Length = 176
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 94/177 (53%), Positives = 123/177 (69%), Gaps = 1/177 (0%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPAF+ WL+ +Y IV+ VEE P G+ PVD SKPNPN +EFD LYLDMNGII
Sbjct: 1 MGVPAFFCWLSSKYLSIIVNCVEEKPP-KCNGIKIPVDASKPNPNDVEFDKLYLDMNGII 59
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ KP +++ +IF+Y+D +F +VR R+LLY+AIDGVAPRAKMNQQ +RRF
Sbjct: 60 HPCTHPEDKPTSKKEEEMMVAIFEYLDGLFNIVRARRLLYMAIDGVAPRAKMNQQLSRRF 119
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQY 177
RA+K+ EA E++ +R+E G L ++ E DS TPGT+FM L+ +L Y
Sbjct: 120 RASKEGMEAAMEKQHVREETLAKGGYLPPEQIKERFDSYCTTPGTEFMDNLAKSLCY 176
>gi|154285288|ref|XP_001543439.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150407080|gb|EDN02621.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 1327
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 100/259 (38%), Positives = 149/259 (57%), Gaps = 32/259 (12%)
Query: 152 KPETCDSNVITPGTQFMAVLSAALQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMS 211
K E DSN ITPGT+FMA L+ L+YFI ++++ WQ +++LS VPGEGEHKIM
Sbjct: 3 KEEAFDSNCITPGTEFMAKLTQQLKYFINKKVSEDVEWQGVEIVLSGHEVPGEGEHKIME 62
Query: 212 YIRLQRNLPGFDPNTRHCLYGLDADLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQV 271
YIR + PG+ P+ RHCLYGLDADLIML L +H+ HF +LRE +T Q +K
Sbjct: 63 YIRQSKAQPGYQPDIRHCLYGLDADLIMLGLLSHDPHFCLLREEVTFGRQSQK------- 115
Query: 272 GHLAAECHGKPGDNPADWNGVDDTPIHKKKYQFLNIWVLREYLQYELDIPNPP----FPI 327
+ + + +++ ++REYL+ E FP
Sbjct: 116 ---------------------KSKELEHQNFYLMHLCMVREYLELEFQELEEENALQFPF 154
Query: 328 NFERIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLL 387
+ ER++DDF+ + FFVGNDFLP++P L I EGA+ + VY++ +GGY+ + G + L
Sbjct: 155 DLERVIDDFILMAFFVGNDFLPNLPNLHINEGALAWMFKVYKQVLPKLGGYINEQGTINL 214
Query: 388 DRVEKFIQSVAVYEDQIFQ 406
+R+ + S++ E + F+
Sbjct: 215 ERLGVLLDSLSDVEFRFFE 233
Score = 165 bits (418), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 88/203 (43%), Positives = 121/203 (59%), Gaps = 9/203 (4%)
Query: 424 NAR-RESSEELLQAPVAVADTVKLGEPGYKERYYADKF--EISNPEEIDKVKKDVVLKYV 480
NA+ +E++ E Q +K E +K YY KF ++ N EE+ ++ ++ YV
Sbjct: 369 NAKVKETTAEEAQQAAEKKYELKFQE--WKNNYYKSKFGWDMDNHEEMRQLTEN----YV 422
Query: 481 EGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPA 540
+GL WV YYY+ V SW WFY YHY+P SD+K + ++ F LG+PF PF+QLMG LP
Sbjct: 423 QGLQWVLYYYYRGVASWPWFYQYHYSPMISDVKLGLEADMNFDLGQPFHPFEQLMGVLPD 482
Query: 541 ASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKK 600
S +P + LMT P SPI FYP DF++DMNGK+ W+ VVK+PFIDEK LL
Sbjct: 483 RSKQIVPSAFHELMTSPESPIIDFYPRDFELDMNGKKMEWEAVVKIPFIDEKRLLSAMAT 542
Query: 601 LEVFLTEEELFRNSVMLDLLYVH 623
+ LT EE RN + L + +
Sbjct: 543 KKHLLTPEENARNEFGVTLKFTY 565
>gi|145552342|ref|XP_001461847.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124429683|emb|CAK94474.1| unnamed protein product [Paramecium tetraurelia]
Length = 351
Score = 189 bits (479), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 129/392 (32%), Positives = 194/392 (49%), Gaps = 83/392 (21%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP FY W+ ++ D YLDMN II
Sbjct: 1 MGVPNFYSWVNEK----------------------------------RVDYFYLDMNQII 26
Query: 61 HPCFHP-----DGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQ 115
+ C + +DDV+ SI +Y+D I LV P++LL+LA DGVAPRAKMNQQ
Sbjct: 27 YKCATDPSVLFKDQLRERDFDDVWVSIINYLDMIINLVNPQQLLFLAFDGVAPRAKMNQQ 86
Query: 116 RTRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAAL 175
R R +++ + L ++ G +K ET +N +PGT+FM L+ +
Sbjct: 87 RQR-------RFQSQKRYKYLSAHLQQIGLF----QKNETYKNNQFSPGTEFMTQLNQQI 135
Query: 176 QYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDA 235
+++I+ + ++ P ++ K+I S +VPGEGEHK++S+IR + FDPN+ H +YG DA
Sbjct: 136 KFYIERKYSEDPKFKNLKIIFSGCDVPGEGEHKLLSFIRNMQ----FDPNSVHMIYGADA 191
Query: 236 DLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDT 295
DLIML L T + I+RE + Q AA N V
Sbjct: 192 DLIMLGLLTQLKNVLIIREDLKFK----------QTASAAA-------------NRVIKI 228
Query: 296 PIHKKKYQFLNIWVLREYLQYELDIPNPPFPINFE--RIVDDFVFLCFFVGNDFLPHMPT 353
P ++ +NI ++REYL E + + ++ RI+DDF+ LCFFVGNDFLP +
Sbjct: 229 P----EFLVINISIVREYLDLEFAVLKDKMKVAYDIHRIIDDFILLCFFVGNDFLPRIYC 284
Query: 354 LEIREGAINLLMHVYRREFTAMGGYLTDAGEV 385
+IR G I L+ ++++ T Y+ G++
Sbjct: 285 FDIRIGTIEPLVDLFKKHLTNANDYIVQRGDI 316
>gi|70926599|ref|XP_735814.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56509808|emb|CAH84865.1| hypothetical protein PC301271.00.0 [Plasmodium chabaudi chabaudi]
Length = 260
Score = 188 bits (478), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 99/189 (52%), Positives = 132/189 (69%), Gaps = 10/189 (5%)
Query: 79 FKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRFRAAKDAAEAEAEEERLRK 138
F +IF YI+ +F ++ P+KLLY+AIDGVAP+AKMNQQR+RRF++ A+E E R
Sbjct: 1 FLNIFLYIERLFDIIEPQKLLYMAIDGVAPKAKMNQQRSRRFKSIL-ASEIEK-----RA 54
Query: 139 EFEEAGKLLSAK----EKPETCDSNVITPGTQFMAVLSAALQYFIQARLNQIPGWQFTKV 194
E K LS ++ DSN+ITPGTQFM LS AL+YFI+ ++ W+ V
Sbjct: 55 YIELRNKFLSENRNVPDEYNHWDSNIITPGTQFMHELSIALKYFIEHKITNDEKWKKIVV 114
Query: 195 ILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIMLSLATHEIHFSILRE 254
I SDANV GEGEHKI ++I+ QR G+DPNTRH ++G+DADLIMLSLA+HE +F ILRE
Sbjct: 115 IFSDANVCGEGEHKIYNFIKSQRAQKGYDPNTRHVIHGMDADLIMLSLASHEPYFYILRE 174
Query: 255 VITLPGQQE 263
+I L +++
Sbjct: 175 IINLDQKED 183
>gi|393910763|gb|EJD76028.1| hypothetical protein LOAG_16951 [Loa loa]
Length = 159
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 90/152 (59%), Positives = 111/152 (73%), Gaps = 1/152 (0%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPAF+RWL +YP IVD VEE P+ D GV PV+ PNPN EFDNLYLDMNGII
Sbjct: 1 MGVPAFFRWLTRKYPSVIVDAVEEKPR-DMNGVRIPVNTVDPNPNFQEFDNLYLDMNGII 59
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ +P+P + +++F IF+YID +F +VRPRKLLY+AIDGVAPRAKMNQQR+RRF
Sbjct: 60 HPCTHPEDRPSPKTEEEMFTLIFEYIDRLFAIVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEK 152
RA+K+A E + R E G L ++K
Sbjct: 120 RASKEAIEKVEQIAETRSRLESEGYPLPPEKK 151
>gi|358253113|dbj|GAA52094.1| 5'-3' exoribonuclease 2 [Clonorchis sinensis]
Length = 1234
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 96/232 (41%), Positives = 133/232 (57%), Gaps = 9/232 (3%)
Query: 442 DTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFY 501
D V+L E G++ RYY KF + +P + + V +Y +GLCWV YYYQ SW W++
Sbjct: 529 DEVRLWEDGWRTRYYQSKFGV-DPADAPEFCIQVGKEYAKGLCWVLAYYYQGCASWDWYF 587
Query: 502 PYHYAPFASDLKDLSDLEITF--FLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSS 559
PYHYAPFASD + L+ F +PFRP +QLMG PA S S +P ++ LMTDP S
Sbjct: 588 PYHYAPFASDFIGIDQLDPGFDKVKTQPFRPLEQLMGVFPADSRSHVPPAWQTLMTDPDS 647
Query: 560 PIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDL 619
PI FYP DF++D+NGKR+ W GV LPF+DE LL+ + L++EE+ RN D
Sbjct: 648 PIIDFYPTDFKVDLNGKRYLWMGVALLPFVDEVRLLKALDERRHLLSDEEVARNIRGPDR 707
Query: 620 LYVHPQHPLYQQI-TLYCQLYHQLPPQD-----RFAWEIDVNASGGMNGYIW 665
L+ HPL + LY + L A +D + G++G++W
Sbjct: 708 LFCRDTHPLASALEALYSKNETDLNTNSGKLVPNSASVLDPRLTHGVSGHVW 759
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/168 (38%), Positives = 99/168 (58%), Gaps = 7/168 (4%)
Query: 268 CGQVGHLAAECHGKPGDNPADWNGVDD----TPIH-KKKYQFLNIWVLREYLQYELDIPN 322
CG + + PG D NG D P + + + F+++ VLREYL +L +
Sbjct: 210 CGLLAIGSTRAKLLPGCPSIDRNGRDAWIEFGPRNFRSDFIFIHLNVLREYLAQDLKLTG 269
Query: 323 PPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHVYRREFTAMGGYLTDA 382
F + ER++DD+VF+CFFVGNDFLPH+P+LEIREGAI+ L+ +Y+ GG+LT +
Sbjct: 270 LTFEWDLERVIDDWVFMCFFVGNDFLPHLPSLEIREGAIDRLIEIYKSAVQTTGGWLTHS 329
Query: 383 GEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYEYNEAMKLNARRESS 430
G+V +DRV+ + + ED+IF+ R Q + + + N R+SS
Sbjct: 330 GKVHMDRVQLIMVELGKMEDEIFKNRR--QSELNFRKRKRDNQSRDSS 375
>gi|207345483|gb|EDZ72294.1| YGL173Cp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 1409
Score = 181 bits (460), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 97/258 (37%), Positives = 149/258 (57%), Gaps = 31/258 (12%)
Query: 152 KPETCDSNVITPGTQFMAVLSAALQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMS 211
K E DSN ITPGT+FMA L+ LQYFI +++ W+ ++I S VPGEGEHKIM+
Sbjct: 5 KGEPFDSNSITPGTEFMAKLTKNLQYFIHDKISNDSKWREVQIIFSGHEVPGEGEHKIMN 64
Query: 212 YIRLQRNLPGFDPNTRHCLYGLDADLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQV 271
+IR ++ F+ NTRHC+YGLDADLIML L+TH HF++LRE +T
Sbjct: 65 FIRHLKSQKDFNQNTRHCIYGLDADLIMLGLSTHGPHFALLREEVTF------------- 111
Query: 272 GHLAAECHGKPGDNPADWNGVDDTPIHKKKYQFLNIWVLREYLQYEL-DIPNP-PFPINF 329
G +E + + + L++ +LREY++ E +I + F NF
Sbjct: 112 GRRNSEKKS----------------LEHQNFYLLHLSLLREYMELEFKEIADEMQFEYNF 155
Query: 330 ERIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDR 389
ERI+DDF+ + F +GNDFLP++P L + +GA +L+ ++ GY+ + G++ L R
Sbjct: 156 ERILDDFILVMFVIGNDFLPNLPDLHLNKGAFPVLLQTFKEALLHTDGYINEHGKINLKR 215
Query: 390 VEKFIQSVAVYEDQIFQK 407
+ ++ ++ +E F+K
Sbjct: 216 LGVWLNYLSQFELLNFEK 233
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 77/171 (45%), Positives = 101/171 (59%), Gaps = 2/171 (1%)
Query: 451 YKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFAS 510
+K YY DK + + E +KV+ D+ YVEGL WV YYY+ SW W+YP+HYAP S
Sbjct: 392 WKHEYYHDKLKFTTDSE-EKVR-DLAKDYVEGLQWVLYYYYRGCPSWSWYYPHHYAPRIS 449
Query: 511 DLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQ 570
DL D +I F L +PF PF QLM LP S + +P +R LM D SPI+ FYP + Q
Sbjct: 450 DLVKGLDQDIEFDLSKPFTPFQQLMAVLPERSKNLIPPTFRPLMYDEQSPIHDFYPAEVQ 509
Query: 571 IDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLY 621
+D NGK W+ VV + F+DEK L+ + L+ EE RN DL+Y
Sbjct: 510 LDKNGKTADWEAVVLISFVDEKRLIEAMQPYLCKLSPEEKTRNQFGKDLIY 560
>gi|219111223|ref|XP_002177363.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217411898|gb|EEC51826.1| predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1]
Length = 156
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 90/165 (54%), Positives = 115/165 (69%), Gaps = 12/165 (7%)
Query: 92 LVRPRKLLYLAIDGVAPRAKMNQQRTRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKE 151
+V+P+ +Y+AIDGVAPRAK+NQQR+RRFR+A D AEA + + +E G
Sbjct: 1 IVKPKVSVYMAIDGVAPRAKLNQQRSRRFRSAMDMAEATKDLK------DEKG------N 48
Query: 152 KPETCDSNVITPGTQFMAVLSAALQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMS 211
+ E DSN ITPGT+F+A +S +QYFI+ ++ + P W VI S +VPGEGEHKIM
Sbjct: 49 QREVFDSNCITPGTEFLAKVSNTIQYFIRKKIKEDPSWHGLTVIFSGHDVPGEGEHKIMQ 108
Query: 212 YIRLQRNLPGFDPNTRHCLYGLDADLIMLSLATHEIHFSILREVI 256
+IR R P + PNTRHC+YG DADLIML L THE HF+ILREVI
Sbjct: 109 HIREMRAQPNYAPNTRHCIYGQDADLIMLGLVTHEPHFTILREVI 153
>gi|123432925|ref|XP_001308510.1| XRN 5'-3' exonuclease N-terminus family protein [Trichomonas
vaginalis G3]
gi|121890194|gb|EAX95580.1| XRN 5'-3' exonuclease N-terminus family protein [Trichomonas
vaginalis G3]
Length = 966
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 157/628 (25%), Positives = 262/628 (41%), Gaps = 123/628 (19%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGV F++WL RYP SI G + + S FD ++D N II
Sbjct: 1 MGVAGFFKWLISRYP-SIC-----------RGASSGISPS--------FDCFFVDFNCII 40
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
H D++ + ++D + +V+P KLLY+++DG AP AK +QR+RRF
Sbjct: 41 HNAIRTIQGSKDLIEDELITEVLRFLDILVHVVQPTKLLYISVDGPAPLAKCIEQRSRRF 100
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQ 180
GK KE E N IT GT+FM L + +++
Sbjct: 101 SGQ--------------------GK----KEVAEGFTKNSITIGTKFMNDLHLKILDYLK 136
Query: 181 ARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
R+N+ P W +I + PGEGEHK++++IR QR ++ + C+Y DAD+ +
Sbjct: 137 ERVNRDPIWAMPHIIYDSYHTPGEGEHKLINFIRYQRAQGTWNEDYSCCIYSPDADIFFI 196
Query: 241 SLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIHKK 300
+L TH +IL++ +K + V A +
Sbjct: 197 ALNTHMKKIAILKDSSGDLKLADKKYNSASVRFWAGD----------------------- 233
Query: 301 KYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGA 360
+ ++ + +LR+ L E N N I DDF + +GNDF+P P I
Sbjct: 234 -FIYVYLSILRQLLAAEFFNSNEDMVNN---ITDDFCAISSLLGNDFIPSFPFFNIDN-- 287
Query: 361 INLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYEYNEA 420
N + VY ++ Y+ + GE + F++ VA + ++ Q Y
Sbjct: 288 FNNALEVYFTQYLPKSKYIVENGEFNYSNLSDFLRDVAYNVGDAEKSVSKQQNLLSY--- 344
Query: 421 MKLNARRESSEELLQAPVAVADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYV 480
+E+ +QA A+ + PG+ E+ K++V +
Sbjct: 345 ---------AEKNVQAKFALPEG-----PGFDEKI-----------------KEIVYHVM 373
Query: 481 EGLCWVCRYYYQDVCSWQWFYPYHYA-PFASDLKDLSDLEITFFLGEPFRPFDQLMGTLP 539
+ WV Y + + SW+W+YPY A P K L + F G P + + L+ LP
Sbjct: 374 DSFVWVLNLYTKGILSWEWYYPYSSAPPLLIISKYLQGYKPNFTQGAPPKSLEVLVSLLP 433
Query: 540 AASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTK 599
A S++ LP + + +P SP+Y M+G + + + F + K ++++
Sbjct: 434 ANSANLLPSCLQ-FLAEPGSPVYDI--------MSG---SARSFTREYFAEVKKIIQEK- 480
Query: 600 KLEVFLTEEELFRNSVMLDLLYVHPQHP 627
E +T+EE RN++ L + + P
Sbjct: 481 --ENEMTDEEKIRNTICDPFLILPNKEP 506
>gi|290992973|ref|XP_002679108.1| 5'-3' exoribonuclease 1 [Naegleria gruberi]
gi|284092723|gb|EFC46364.1| 5'-3' exoribonuclease 1 [Naegleria gruberi]
Length = 968
Score = 176 bits (445), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 143/495 (28%), Positives = 223/495 (45%), Gaps = 76/495 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNG-MEFDNLYLDMNGI 59
MGVP + +L P I +++ P + + N M D+LYLDMNGI
Sbjct: 1 MGVPFLFSFLLSECPEMIKEII-------------PSSSASSSSNTTMTIDHLYLDMNGI 47
Query: 60 IHP-------------------------CFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVR 94
IH + + P + + SI Y++ + R
Sbjct: 48 IHTFKDTNLQTKLLERLVSSSSSSSSSSSSNNEEVEIPMTMEKFIFSILLYLEEVIYRFR 107
Query: 95 PRKLLYLAIDGVAPRAKMNQQRTRRFRAAKDAA-------------EAEAEEERLRKEFE 141
P K L A+DG AP AK+NQQR RR+ + + + E+ L E
Sbjct: 108 PSKTLMFALDGSAPCAKINQQRERRWVSFNNHSGLPKRHHHHHQHGNHHGEQHDLHHGEE 167
Query: 142 EAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQARLNQIPGWQ-FTKVILSDAN 200
K KE DS IT GT FM LS LQ+FI+ +L P W+ +I SD++
Sbjct: 168 NRKK----KEDESLFDSISITSGTSFMKELSEHLQFFIKRKLQDDPNWRNIENIIFSDSS 223
Query: 201 VPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIMLSLATHEIHFSILREVITLPG 260
V GEGEHKIMS+IR + +P + + +YG+D+DLI+LSL THE +LR+ +P
Sbjct: 224 VFGEGEHKIMSHIRKVQQIPN-RKSEKFMIYGMDSDLILLSLVTHEEDIYVLRD--WMPS 280
Query: 261 QQEKCFVCGQV-GHLAAECHGKPGDNPADWNGVDDTPIHKKKYQFLNIWVLREYLQ-YEL 318
+ QV + K N + D H K+ + I ++R+ ++ Y
Sbjct: 281 VSDS---FNQVYSRWKVRRNFKKKSNSSSRTVDKDRFDH--KFHLVEISLVRKLIEKYMR 335
Query: 319 DIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEI--REGAINLLMHVYRREFTAM- 375
N + R++DDF+ + F GNDF+ +PTL+I E A+ L VYR F+ +
Sbjct: 336 QDLNSSIEFDLNRVIDDFILMLFVCGNDFISSLPTLDIGKDENALGYLFKVYRTLFSTVF 395
Query: 376 -GGYLTDAGE----VLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYEYNEAMKLNARRESS 430
G Y+T++ + L+R+E F+Q + E ++ R + ++ NE + R ++
Sbjct: 396 KGCYITNSSNPSELINLERLETFMQVIGRLEVRVLTNRLK-KELQLINEKKSIEERTKAK 454
Query: 431 EELLQAPVAVADTVK 445
E+ A + K
Sbjct: 455 EQASTTTTASEEESK 469
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 76/172 (44%), Gaps = 32/172 (18%)
Query: 451 YKERYYADKFEI---SNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAP 507
+K YY+ K I S+ + +++V +Y++ + W YYY V SW++ Y +HYAP
Sbjct: 720 WKVNYYSRKLNITYDSSSKGGGPQVRELVKEYLKAMYWTFYYYYFGVPSWEYSYNFHYAP 779
Query: 508 FASDLKDLSDL--EITFFLGEPFRPFDQLMGTLPAASSSALPE---------KYRNLMTD 556
ASD +L +L EITF G P P + L+ +P + E L++
Sbjct: 780 AASDFVNLKELFTEITFHKGLPLNPIESLLAVIPLHKIKLVHECLHTDQEKQVLSQLISS 839
Query: 557 PSSPIYKFY--------PPDFQIDMNGKRFA----------WQGVVKLPFID 590
+S IY Y D ID N + + VV LPF++
Sbjct: 840 HTSTIYDLYHKKSNHTIEEDLDIDPNDEGLKNSLKDPFYHYSKMVVHLPFVN 891
>gi|452819063|gb|EME26163.1| 5'-3' exoribonuclease, partial [Galdieria sulphuraria]
Length = 537
Score = 176 bits (445), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 98/222 (44%), Positives = 127/222 (57%), Gaps = 6/222 (2%)
Query: 418 NEAMKLNARRESSEELLQAPV--AVADTVKLGEPGYKERYYADKFEISNPEEIDKVKKD- 474
++ +K +E E L + V +V D V+LGE G+KERYY KF S E + K++
Sbjct: 89 DQQVKEQFEKELKERLYKKRVVDSVEDVVRLGEQGWKERYYEKKFHWSPQSETSQRKREE 148
Query: 475 VVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKD--LSDLEITFFLGEPFRPFD 532
+ KY EGL WV RYYY+ SW W++PYHYAPFASDL + + G+PFRP +
Sbjct: 149 LAYKYFEGLLWVMRYYYRGCVSWTWYFPYHYAPFASDLAACPFEADSVQYERGKPFRPLE 208
Query: 533 QLMGTLPAASSS-ALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDE 591
QLM LP +S+ LP+ LM DP S + FYP DF ID+ GKRF WQGV LPF+D
Sbjct: 209 QLMAVLPPSSAKEVLPKSLTQLMMDPHSELKPFYPDDFVIDLEGKRFVWQGVALLPFVDA 268
Query: 592 KLLLRQTKKLEVFLTEEELFRNSVMLDLLYVHPQHPLYQQIT 633
LL + E T EE RNS+ +L H L Q I+
Sbjct: 269 FLLENAVRNAEESFTLEERERNSIGETILATHKSTLLGQFIS 310
>gi|281201939|gb|EFA76147.1| hypothetical protein PPL_10728 [Polysphondylium pallidum PN500]
Length = 2230
Score = 172 bits (435), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 103/291 (35%), Positives = 151/291 (51%), Gaps = 35/291 (12%)
Query: 1 MGVPAFYRWLADRYP----------LSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFD 50
MGVP+FY+WL ++YP + ++ + + + +
Sbjct: 1 MGVPSFYKWLTEKYPKITCTNYLLENIENNNNNDNNNNENGNGNNNNNHGNKEKKKLRLN 60
Query: 51 NLYLDMNGIIHPCFHPDGKP--APTSYDDVFK-SIFDYIDHIFLLVRPRKLLYLAIDGVA 107
NLY+DMNG+IH H +P DDV + ++ +D + V+P LLY+A+DGV
Sbjct: 61 NLYIDMNGVIHNSTHAKNSTTLSPVESDDVCRMNLLKNLDELVGTVQPTNLLYIAMDGVP 120
Query: 108 PRAKMNQQRTRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQF 167
PRAK +QR RRFR+AKDA +A K L + E DSN I+P T+F
Sbjct: 121 PRAKAIEQRKRRFRSAKDAKDA-------------LSKRLPSDPVFEPFDSNCISPATEF 167
Query: 168 MAVLSAALQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTR 227
M ++ + + QA + ++P +++SDA+VPGEGEHKI+ +IR R + +T
Sbjct: 168 MCKVNEWVLTYAQALVKRMPS---VSIVVSDASVPGEGEHKIIDFIRAHRE--HWPSDTS 222
Query: 228 HCLYGLDADLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAEC 278
H YG+DADLI L L+T HF +LR++ G Q C C GHL EC
Sbjct: 223 HVFYGMDADLIFLGLSTQLSHFFVLRDL----GAQIYCSTCKNNGHLCYEC 269
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 98/346 (28%), Positives = 168/346 (48%), Gaps = 40/346 (11%)
Query: 292 VDDTPIHKK--KYQFLNIWVLREYLQYELDI---PNPPFPINFERIVDDFVFLCFFVGND 346
+ DTP + + F+N+ L+EY +Y + + ++ R+++DF +C +GND
Sbjct: 545 LSDTPTMRDDDSFDFVNLDYLKEYFRYSVLSGLSESVASRVDCNRMINDFTMMCMLLGND 604
Query: 347 FLPHMPTLEIREGAINLLMHVYR------REFTAMGGYLTDAGEVLLDRVEKFIQSVAVY 400
FLPH+PT+ I+EG+I L+M YR ++ ++ YLTD + K + ++ +
Sbjct: 605 FLPHLPTMAIKEGSIELMMTWYRDWLSSFKDESSTIQYLTDGPNINYKPFHKLLLMLSKW 664
Query: 401 EDQIF---QKRTRIQQAYEYNEAMKLNARRESSEELLQAPVAVADTVKLGEPGYKERYYA 457
E F ++ ++ + + +K + ES L + YY
Sbjct: 665 ESLYFPDKLEKMYKKEIFRLDNLLKTSPHLESHRRNLDGDI---------------NYYK 709
Query: 458 DKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSD 517
K ++ +++++ D+ +V+GL WV RYY +W W+YPYHYAP SDL +
Sbjct: 710 LKIGVT-IDKVEETANDICKAFVDGLAWVLRYYTVGCPAWSWYYPYHYAPLISDLAKFVE 768
Query: 518 LE---------ITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPD 568
+ I F G P P+ L+ LP SS LP K + + +P+ + +
Sbjct: 769 KQSQVYNDTKHIVFDYGAPLEPYIHLLSVLPHYSSKLLPPKLADSIVREPAPLSRLFEER 828
Query: 569 FQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKK-LEVFLTEEELFRN 613
F+ID NG+ +W+GVV L FI+ +L ++ L+ EEL RN
Sbjct: 829 FRIDPNGEEVSWKGVVLLDFINTNVLKEHASPIIKDQLSAEELERN 874
>gi|109287937|ref|YP_654631.1| hypothetical protein MIV059L [Invertebrate iridescent virus 3]
gi|123808652|sp|Q197A1.1|EX0N_IIV3 RecName: Full=Putative exonuclease 059L
gi|106073560|gb|ABF82089.1| hypothetical protein MIV059L [Aedes taeniorhynchus iridescent
virus]
Length = 560
Score = 171 bits (432), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 175/647 (27%), Positives = 265/647 (40%), Gaps = 133/647 (20%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MG+ F+RW D +P ++ ++ + + D +P L LD+NGII
Sbjct: 1 MGIKYFFRWYKDSFPNTVTKYSTKNHK-------KSQDTDEPFL-------LLLDLNGII 46
Query: 61 HPC---------FHPDG--KPAPTSYDD-----VFKSIFDYIDHIFLLVRPRKLLYLAID 104
H F P K +P Y V++ + ID + LV PR+L+ L ID
Sbjct: 47 HTSCQKIYKYGSFEPKNLLKKSPPVYKGEKDVLVYEDVLASIDSLVALVEPRELV-LCID 105
Query: 105 GVAPRAKMNQQRTRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPG 164
GVAP +K QQR RRF K + G DSN I+PG
Sbjct: 106 GVAPVSKQIQQRQRRFITHK----------------TDGG-----------FDSNCISPG 138
Query: 165 TQFMAVLSAALQYFIQARLNQIPGW-QFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFD 223
T+F+ L L+ ++++L + W + + D+ VPGEGEHK+ ++R + D
Sbjct: 139 TEFLFQLGLYLKTHLESKLEK--EWLNVSTIYFMDSLVPGEGEHKLFDFLRTHQT-RIVD 195
Query: 224 PNTRHCLYGLDADLIMLSLATH-----EIHFSILREVITLPGQQEKCFVCGQVGHLAAEC 278
+ G DADLIMLSL E SILRE
Sbjct: 196 TKFNIVVVGNDADLIMLSLLVSVLFIKENPLSILRE------------------------ 231
Query: 279 HGKPGDNPADWNGVDDTPIHKKKYQFLNIWVLREYLQYELDIPNPPF-PINFERIVDDFV 337
D K Y ++I +L++ + P F P +FE ++ DFV
Sbjct: 232 ---------------DLTSKKLDYLLVDINLLKDTIYQNASRDKPRFTPYDFEFVICDFV 276
Query: 338 FLCFFVGNDFLPHMPTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSV 397
+CF +GNDFLP +P I +G +++L+ Y T AG + V KF
Sbjct: 277 VMCFMIGNDFLPSVPLFNIYDGGLDMLLKY----------YFTTAGYITCRSVSKFYGRN 326
Query: 398 AVYEDQIFQKRTRIQQAYEYNEAMKLN--ARRESSEELLQAPVAVADTVKLGEPGYKERY 455
+ + + + Q Y + A +N A P + D V E E
Sbjct: 327 KGKKMEKIKINFKHLQPYLHYIATAVNPQAIEHYRNRNYGYPNVLLDVVLKKEAMLTEDV 386
Query: 456 YADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYY-YQDVC-SWQWFYPYHYAPFASDLK 513
+ +P K+ K +V Y+E + W+ YY Y VC W +YP +AP A DL
Sbjct: 387 TTHYLKAYSPHH--KITKSLVHSYLEEIKWIFNYYAYGAVCIDWNMYYPSQFAPTALDL- 443
Query: 514 DLSDLEITFFLGEPFR------PFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPP 567
+ L T G R PF QL+ LP SS LP+ L+ + +P
Sbjct: 444 SFATLTFTSQSGLKERKKCLTDPFFQLLCILPPHSSDLLPDPLNKLLV---QKLVDGHPI 500
Query: 568 DFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNS 614
+ ++D +GK W+ + LP +D +L+ ++E+L RN+
Sbjct: 501 EIKMDYDGKLNEWEAIPILPPLDYNKILKMYNDHIHQCSKEDLKRNT 547
>gi|154317860|ref|XP_001558249.1| hypothetical protein BC1G_02913 [Botryotinia fuckeliana B05.10]
Length = 945
Score = 169 bits (427), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 90/214 (42%), Positives = 124/214 (57%), Gaps = 10/214 (4%)
Query: 410 RIQQAYEYNEAMKLNARRESSEELLQAPVAVADTVKLGEPGYKERYYADKFEISNPEEID 469
RI + Y+ E + + S+E QA + K E +K++YY KFE EI+
Sbjct: 29 RIVKQYDKAEVLDV------SKEQAQAEMERKYEEKFQE--WKDKYYEGKFEWDRKNEIE 80
Query: 470 KVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDLEITFFLGEPFR 529
K + YV+GL WV YYY+ V SW W+Y YHY+P SD+ ++ F LG+PF
Sbjct: 81 LTK--LCENYVQGLQWVLYYYYRGVVSWPWYYQYHYSPMISDVIKGLKADVNFKLGQPFH 138
Query: 530 PFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFI 589
PF+QLMG LP S +P Y +LMT+P+SPI FYP DF++DMNGK+ W+ VVK+PFI
Sbjct: 139 PFEQLMGVLPDRSKKIVPTVYHDLMTNPASPIIDFYPRDFELDMNGKKMEWEAVVKIPFI 198
Query: 590 DEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVH 623
DEK LL L++ E FRN + L + +
Sbjct: 199 DEKRLLDAMATKNNLLSDAEKFRNEFGVSLKFTY 232
>gi|403221200|dbj|BAM39333.1| 5'-3' exoribonuclease 1 [Theileria orientalis strain Shintoku]
Length = 642
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 127/456 (27%), Positives = 218/456 (47%), Gaps = 75/456 (16%)
Query: 2 GVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGIIH 61
GVP Y W+ + + S + + +D + G+ D Y+DMN +IH
Sbjct: 88 GVPRLYGWMMENF--SKMRIPLQDSDIYGK-----------------VDYFYVDMNAVIH 128
Query: 62 PCFHPDGKPAPTSYDDV-FKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
H + P+ D + I + IF LV+P+K++Y+ +DGV P AK+NQQRTRRF
Sbjct: 129 AATHGNVSPSLMMEDQQRMRRIVTALLKIFKLVKPKKMMYIGVDGVCPSAKINQQRTRRF 188
Query: 121 RAAKDAAEA------EAEEERLRKEFEEAGKLLSAKEKPETC-DSNVITPGTQFMAVLSA 173
R K + ++EE + +E K L + D + I+PGT+FM+++ +
Sbjct: 189 RLYKSTTKPGFKPYYKSEEGK----YEYTVKKLPIQSYDNVSFDPSYISPGTEFMSMMDS 244
Query: 174 ALQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTR---HCL 230
L+ +I + + W+ ++ S +VPGEGEHKI I R + DP + H +
Sbjct: 245 ELRNWIALQTYE-GTWEDRYIVYSGTDVPGEGEHKIYDAI---RRMAECDPKVKQENHLV 300
Query: 231 YGLDADLIMLSLATHEIHFSILREVI-----TLPGQQEKCFVCGQVGHLAAECHGKPGDN 285
YGLDADL+MLSL T + ILRE L + + + G L
Sbjct: 301 YGLDADLMMLSLITKMPNMYILREKYDHAPHKLAKIKPNPYYSKETGLL----------- 349
Query: 286 PADWNGVDDTPIHKKKYQFLNIWVLREYL-----QYELDIPNPPFPINF-----ERIVDD 335
++G+D Y+ L++ LR + + + N F R+ DD
Sbjct: 350 --HFHGMDYIDFKISDYEVLSMRFLRRIMYSRCIRTSEAVSNDANKFLFNQNSRNRLTDD 407
Query: 336 FVFLCFF---------VGNDFLPHMPTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVL 386
F L F VGNDFLPH+PT+E+ + N L++ Y + G+LT++ ++
Sbjct: 408 FSLLSFLAVDKLCTTNVGNDFLPHLPTVELCNSSFNDLVNTYYKMLPKFRGFLTESYKIN 467
Query: 387 LDRVEKFIQSVAVYEDQIFQKRTRIQQAYEYNEAMK 422
+ R+++ ++ ++ E + F++++ +++ E+++ K
Sbjct: 468 MSRLQQLMKELSKLEIKYFKQKSTLEKISEFSDPKK 503
Score = 39.3 bits (90), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 30/51 (58%)
Query: 563 KFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRN 613
+++P DF+I GK W+ VVKLPF+D + L + + + L L++N
Sbjct: 570 EYFPEDFEICEEGKENEWEHVVKLPFLDTRHLSKVARSVNDELKYTNLYKN 620
>gi|358389627|gb|EHK27219.1| hypothetical protein TRIVIDRAFT_207716 [Trichoderma virens Gv29-8]
Length = 904
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 88/176 (50%), Positives = 116/176 (65%), Gaps = 13/176 (7%)
Query: 56 MNGIIHPCFHPDGKPAPT---SYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKM 112
MNGIIH C H D T S +++F IF+YI+H+F ++P+KL ++AIDGVAPRAKM
Sbjct: 1 MNGIIHNCTHKDAGEDATFRLSEEEMFIRIFNYIEHLFGKIKPKKLFFMAIDGVAPRAKM 60
Query: 113 NQQRTRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLS 172
NQQR RRFR A DA +A E+ +R+ E KE+P DSN ITPGT+FMA LS
Sbjct: 61 NQQRARRFRTALDAEKAR--EKAIREGIE------LPKEEP--FDSNCITPGTEFMAKLS 110
Query: 173 AALQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRH 228
L+YF+ ++++ WQ ++LS VPGEGEHKIM YIR + P +DPN R+
Sbjct: 111 QQLRYFVNKKVSEDTDWQGCDIVLSGHEVPGEGEHKIMEYIRNAKAQPNYDPNARN 166
>gi|47198701|emb|CAF89019.1| unnamed protein product [Tetraodon nigroviridis]
Length = 220
Score = 166 bits (420), Expect = 4e-38, Method: Composition-based stats.
Identities = 90/246 (36%), Positives = 132/246 (53%), Gaps = 38/246 (15%)
Query: 164 GTQFMAVLSAALQYFIQARLNQIPGWQFTKVILSDANV---------PGEGEHKIMSYIR 214
GT FMA L L+YF+ ++L+ WQ +V LS V PGEGEHKIM +IR
Sbjct: 1 GTDFMARLQEQLEYFVHSKLSTDKLWQNVRVYLSGHEVRSQSTPTLTPGEGEHKIMEFIR 60
Query: 215 LQRNLPGFDPNTRHCLYGLDADLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHL 274
+ N PG DPNTRHCLYGLDADLIML L +HE +FS+LRE + G++ + +
Sbjct: 61 SENNGPGHDPNTRHCLYGLDADLIMLGLTSHEPNFSLLREEVRFGGKKSQKRI------- 113
Query: 275 AAECHGKPGDNPADWNGVDDTPIHKKKYQFLNIWVLREYLQYELDIPNPPF--PINFERI 332
T + + L++ ++REY+ YE + + ERI
Sbjct: 114 --------------------TAPEETTFHLLHLSLMREYIDYEFSVLRNHLGSTYDLERI 153
Query: 333 VDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEK 392
+DD++ + F +GNDF+PH+P L I A+ LL Y ++ GYL + G + L EK
Sbjct: 154 IDDWILMGFLIGNDFIPHLPHLHISHDALPLLYKTYISVLPSLRGYLNENGNLNLKNFEK 213
Query: 393 FIQSVA 398
+++ ++
Sbjct: 214 YLEKLS 219
>gi|397626482|gb|EJK68154.1| hypothetical protein THAOC_10694 [Thalassiosira oceanica]
Length = 759
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 92/200 (46%), Positives = 118/200 (59%), Gaps = 8/200 (4%)
Query: 440 VADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQW 499
V D V+L EPG+K+RYY DK + + E ++ + YV+GLCWV RYYY SW+W
Sbjct: 98 VKDNVRLHEPGWKDRYYTDKCKADDVRE-HGGREHLFRSYVKGLCWVMRYYYDGCPSWKW 156
Query: 500 FYPYHYAPFASDLKDL----SDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMT 555
+YP+HYAPFASDL+++ D +I F EPF P +QLM LP S A+P+ R LM
Sbjct: 157 YYPFHYAPFASDLRNIERFQKDCDI-FDKSEPFGPVEQLMAVLPEDSRHAVPKGSRWLMR 215
Query: 556 DPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSV 615
D SPI FYP D D NGK W VV LPFIDE LL + T++EL NS
Sbjct: 216 DSESPIIDFYPKDVPCDPNGKAMPWLWVVLLPFIDEGRLLDALRPTMAKWTQKELLCNSR 275
Query: 616 MLDLLYV--HPQHPLYQQIT 633
LD YV H +PL +++
Sbjct: 276 GLDDGYVFLHKDNPLADKVS 295
>gi|330804007|ref|XP_003289991.1| hypothetical protein DICPUDRAFT_80750 [Dictyostelium purpureum]
gi|325079889|gb|EGC33468.1| hypothetical protein DICPUDRAFT_80750 [Dictyostelium purpureum]
Length = 1065
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 102/289 (35%), Positives = 149/289 (51%), Gaps = 39/289 (13%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MG+P F+RWL + YP +V G + ++FDNLY+DMNG+I
Sbjct: 1 MGIPLFFRWLVENYP-----------KVLANGYI----------DKIQFDNLYIDMNGVI 39
Query: 61 HPCFHPD--GKPAPTSYDDVF-----KSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMN 113
H D GK DD+ +S++ +D + L V P KLLY+ IDGV PRAK
Sbjct: 40 HNSIKVDKRGKYGLIYKDDIKDEDIKQSVYWRLDQMILSVNPSKLLYIGIDGVPPRAKAV 99
Query: 114 QQRTRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSA 173
+QR RRF++ K++ E + K + +L + K DSN I+P T+F+ ++
Sbjct: 100 EQRRRRFKSVKESKANILTELKKSKPYVSDEELSEIQSK--VFDSNSISPATEFIEKINQ 157
Query: 174 ALQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRN--LPGFDPNTRHCLY 231
++ + + + P ++LSD+ VPGEGEHKIM YIR + + + HC Y
Sbjct: 158 WIKEYCEKLSTERPSLT---IVLSDSTVPGEGEHKIMDYIRSNHSKLIATGEKQLTHCFY 214
Query: 232 GLDADLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHG 280
G+DADLI L L TH +F ILR+ + L +C C HL+ EC
Sbjct: 215 GMDADLIFLGLETHLPNFYILRDSLHLL----ECKTCDSKDHLSYECKS 259
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 74/158 (46%), Gaps = 10/158 (6%)
Query: 302 YQFLNIWVLREYLQYEL--DIPNPPF-PINFERIVDDFVFLCFFVGNDFLPHMPTLEIRE 358
+ F+N+ R YL+Y L +I ++F R ++D LC +GNDF+PH+P+ I
Sbjct: 603 FDFVNLDSFRLYLEYYLLENIDQERREKVDFNRCINDITLLCTLLGNDFVPHLPSFLISF 662
Query: 359 GAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQI--FQKRTRIQQAYE 416
G++ L + Y+ +T L V + V+E+ I F+ T+ ++Y+
Sbjct: 663 GSLELTLCWYKDWIQKSIETITKDNSQSLHYVTNQEATKIVFENIIPLFESLTK-WESYQ 721
Query: 417 YNEAMK----LNARRESSEELLQAPVAVADTVKLGEPG 450
Y +K N R+E ++ AP + + + P
Sbjct: 722 YPAFLKKQIIKNNRKEMYKQSSSAPPTPSQSTSISTPS 759
>gi|238609845|ref|XP_002397575.1| hypothetical protein MPER_01971 [Moniliophthora perniciosa FA553]
gi|215472342|gb|EEB98505.1| hypothetical protein MPER_01971 [Moniliophthora perniciosa FA553]
Length = 150
Score = 165 bits (417), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 76/143 (53%), Positives = 101/143 (70%), Gaps = 4/143 (2%)
Query: 454 RYYADKFEISNPEEIDK-VKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDL 512
RYY KF + E DK +K + YVEG+ WV YYYQ SWQW+YPYH+APFA+D
Sbjct: 1 RYYQQKFGV---EYTDKEFRKKLTQSYVEGMSWVLCYYYQGTPSWQWYYPYHFAPFAADF 57
Query: 513 KDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQID 572
+++ ++ I F +G+PF+P++QLMG PAAS +P+ + +LMT+ SPI FYP FQ+D
Sbjct: 58 EEVDEMNIHFEIGQPFKPYEQLMGVFPAASRKHIPDPFHHLMTEEESPIIDFYPSTFQVD 117
Query: 573 MNGKRFAWQGVVKLPFIDEKLLL 595
MNGK+ AWQG+ LPFIDEK LL
Sbjct: 118 MNGKKMAWQGIALLPFIDEKRLL 140
>gi|67583943|ref|XP_665025.1| CG10354-PA [Cryptosporidium hominis TU502]
gi|54655348|gb|EAL34795.1| CG10354-PA [Cryptosporidium hominis]
Length = 171
Score = 165 bits (417), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 85/176 (48%), Positives = 114/176 (64%), Gaps = 6/176 (3%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP FYRWL +RYPL + ++ + +D E +D+++PN NG EFD LYLDMNGII
Sbjct: 1 MGVPTFYRWLCNRYPLIVKELKD---AIDEETCLNDLDLTEPNING-EFDCLYLDMNGII 56
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC +P G P ++F + DYID ++ +V+PR+L+Y+AIDGVAPRAKMNQQR+RR+
Sbjct: 57 HPCCNPSGGDKPKDEAEMFTRVCDYIDRLYAMVKPRRLIYMAIDGVAPRAKMNQQRSRRY 116
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQ 176
+ A + E ++EF + G E E DSNVITPGT FM L+ L
Sbjct: 117 KTALEMDYNRRAYEIAQEEFYKIG--YKCPEYVEKWDSNVITPGTPFMERLTMCLH 170
>gi|7509723|pir||T26774 hypothetical protein Y39G8C.b - Caenorhabditis elegans
Length = 1801
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 90/218 (41%), Positives = 124/218 (56%), Gaps = 21/218 (9%)
Query: 201 VPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIMLSLATHEIHFSILREVITLPG 260
VPGEGEHKIM +IR +R +DPNTRHC+YGLDADLIML + +HE HFS+LRE +T
Sbjct: 269 VPGEGEHKIMDFIRTERAGSSYDPNTRHCMYGLDADLIMLGIVSHEPHFSLLREEVTFNT 328
Query: 261 QQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIHKKKYQFLNIWVLREYLQYEL-D 319
+ K DN A T KK+ L++ +LREYL +E D
Sbjct: 329 RPRK------------------NDNKAT-KKPKRTDSDVKKFHLLHLSLLREYLAWEFAD 369
Query: 320 IPNP-PFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHVYRREFTAMGGY 378
+ + PF ERIVDD++ L VGNDFLPH+P + I + A+ LL Y++ + GY
Sbjct: 370 VKDSLPFEYEMERIVDDWILLGLLVGNDFLPHLPNIHIHDDALPLLYSTYKKVLPTLDGY 429
Query: 379 LTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYE 416
+ +AG + L R E F+ +A+ + F +R +Q E
Sbjct: 430 INEAGYLNLSRFEAFLAELALNDKTSFMERLEDEQFME 467
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 76/167 (45%), Positives = 100/167 (59%), Gaps = 6/167 (3%)
Query: 451 YKERYYADKFEISNPEEIDKVK-KDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFA 509
+K+ YY+DK N I K + ++ YV + W YYY SW WFYP+HYAPF
Sbjct: 591 HKKTYYSDKLRYKN---ISKQQLREQAEGYVRAIQWNLHYYYHGCVSWSWFYPHHYAPFI 647
Query: 510 SDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLM-TDPS-SPIYKFYPP 567
SD++ + + F L EPF PF+QL+ LP AS+ LP R LM +DP+ SPI FYP
Sbjct: 648 SDVRGFVGMRMEFELSEPFHPFEQLLAVLPEASADCLPRPLRELMSSDPAKSPICDFYPA 707
Query: 568 DFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNS 614
+F+ D+NGKR W+ VV +PFI+EK LL + LT EE RNS
Sbjct: 708 NFETDLNGKRNEWEAVVLIPFIEEKRLLEAIEAKRSRLTSEENARNS 754
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 85/215 (39%), Positives = 118/215 (54%), Gaps = 34/215 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP FYRW ++RYP + +V+ E Q+ EFDNLYLDMNGII
Sbjct: 1 MGVPKFYRWTSERYPC-LSEVINES-QIP------------------EFDNLYLDMNGII 40
Query: 61 HPCFHPDGKPAP--TSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C HP+ + D++F +IF YI++++ L+RP+K+ ++A+DGVAPRAKMNQQR R
Sbjct: 41 HNCSHPNDDDVTFRITEDEIFVNIFAYIENLYNLIRPQKVFFMAVDGVAPRAKMNQQRAR 100
Query: 119 RF--------RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAV 170
RF K+ A +L K E G+++ ++ + DSN ITPGT FM
Sbjct: 101 RFMYVEELLLAGKKEIWSARTAHTQLAKALEN-GEIMPSEAR---FDSNCITPGTYFMTR 156
Query: 171 LSAALQYFIQARLNQIPGWQFTKVILSDANVPGEG 205
L L +I+ + WQ K+ILS N G
Sbjct: 157 LHQKLDDWIKTKSATDSRWQGRKIILSGHNQKKSG 191
>gi|395510109|ref|XP_003759325.1| PREDICTED: 5'-3' exoribonuclease 2-like, partial [Sarcophilus
harrisii]
Length = 117
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 74/109 (67%), Positives = 92/109 (84%)
Query: 32 GVARPVDVSKPNPNGMEFDNLYLDMNGIIHPCFHPDGKPAPTSYDDVFKSIFDYIDHIFL 91
GV PVD SKPNPN +EFDNLYLDMNGIIHPC HP+ KPAP + D++ +IF+YID +F
Sbjct: 6 GVKIPVDTSKPNPNEVEFDNLYLDMNGIIHPCTHPEDKPAPKNEDEMMVAIFEYIDRLFN 65
Query: 92 LVRPRKLLYLAIDGVAPRAKMNQQRTRRFRAAKDAAEAEAEEERLRKEF 140
+VRPR+LLY+AIDGVAPRAKMNQQR+RRFRA+K+ EA E++R+R+E
Sbjct: 66 IVRPRRLLYMAIDGVAPRAKMNQQRSRRFRASKEGMEATIEKQRVREEI 114
>gi|15078725|ref|NP_149475.1| 012L [Invertebrate iridescent virus 6]
gi|82013011|sp|Q9QSK5.1|EXON_IIV6 RecName: Full=Putative exonuclease 012L
gi|5725643|gb|AAD48147.1|AF083915_1 012L [Invertebrate iridescent virus 6]
Length = 624
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 172/695 (24%), Positives = 276/695 (39%), Gaps = 178/695 (25%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MG+ F++WL + SI + D N D L +DMNGII
Sbjct: 1 MGIKYFFKWLKTNHSESIKCIDRHD-------------------NSQCIDVLLIDMNGII 41
Query: 61 HPC------FHPDGKPAPTSYDD-VFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMN 113
H + P + D V+ + ID + + +P++L+ L IDGVAPR+K
Sbjct: 42 HNSAQEVYGYGSFSFPKENACDKKVYSLVCRQIDRMVIQFKPKELI-LCIDGVAPRSKQI 100
Query: 114 QQRTRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSA 173
QQR RRF AA D RK+ K DSN I+PGT+FM L
Sbjct: 101 QQRQRRFLAAHD-----------RKKPGTEFNFDCNKGNTSKFDSNSISPGTEFMHNLGR 149
Query: 174 ALQYFIQA----------------------------RLNQIPGWQFTKVILSDANVPGEG 205
+ I+ +++ W V+ ++ V GEG
Sbjct: 150 YIDIHIKKKQKPAFTGRETTDAPQNNWRNKDQSWRQKVDDTAEWSNLTVVFANDKVSGEG 209
Query: 206 EHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIMLSLATHEIHFSILREVITLPGQQEKC 265
EHK++ YIR N +C+YG DADLIMLS++ + + ++ + L +
Sbjct: 210 EHKLLDYIRKYGN-----SYYTYCIYGSDADLIMLSMSA--LTTTAIKNIYVLRDE---- 258
Query: 266 FVCGQVGHLAAECHGKPGDNPADWNGVDDTPIHKKKYQFLNIWVLREYLQYELDIPNPPF 325
+ P Y +NI + L ++ N
Sbjct: 259 -------------YKSPN------------------YLLINIPNFVKNLIKDVK-SNWTD 286
Query: 326 PINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHVYRREFTAMGGYLTDAGEV 385
++ +R ++DF+F+CF VGNDFLPH+P++EI I ++ Y T Y+TD
Sbjct: 287 KLDEKRFINDFIFMCFMVGNDFLPHIPSIEIMTNGIESMLAFY----TKNKNYITDNNG- 341
Query: 386 LLDRVEKFIQSVAVYEDQIFQKRTRIQQAYEYNEAMKLNARRESSEELLQAPVAVADTVK 445
L + + + + +D +++ + +E + + ESS L+ V
Sbjct: 342 -LGEIFNYESLLPILKDLEGLEQSLCNEKVNNSEYFR-DDLLESSSFLVTNEFGQQKCVN 399
Query: 446 LGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHY 505
+ E Y+E+Y FE S+ + L Y+EG+ WV YY V W+W Y Y Y
Sbjct: 400 INE--YREKYMKKHFESSS---------EASLMYLEGMQWVLSYYTLKVPDWEWSYKYDY 448
Query: 506 AP-FASDLKDLSDLEITFFLGE-----PFRPFDQLMGTLPAASSSALPEKY--------- 550
AP S ++ +S +I + P + + T A SSS + +
Sbjct: 449 APNLTSIIEAMSFKQIGGTSKKEKNQYKLFPVNSVNSTEVATSSSGFQKSFSMVFQNSLQ 508
Query: 551 -----RNLMTDPSS----PIYK---------------------------FYPPDFQIDMN 574
R+ T SS P ++ + P + ID
Sbjct: 509 NTKDWRDKKTKTSSDAIPPFHQLLFILPPDSSDLLPYPLCEALTNELKIYAPKELIIDRA 568
Query: 575 GKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEE 609
GKR W+G+V LP +D+K++ K + ++TE++
Sbjct: 569 GKRQEWEGIVLLPKLDQKVVTECYLKYKPYVTEKK 603
>gi|70946141|ref|XP_742816.1| exoribonuclease [Plasmodium chabaudi chabaudi]
gi|56522004|emb|CAH76803.1| exoribonuclease, putative [Plasmodium chabaudi chabaudi]
Length = 742
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 80/188 (42%), Positives = 118/188 (62%), Gaps = 1/188 (0%)
Query: 452 KERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASD 511
+ RYY KF + + +D+ K+VV KY+EGL WV YY+Q W W+YPY+YAP +SD
Sbjct: 157 RARYYRSKFHLDETDNVDEFVKEVVYKYIEGLAWVLCYYFQACPMWHWYYPYYYAPLSSD 216
Query: 512 LKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQI 571
L + D+ I+F EP PF+QL+ LP+ SS LP+ YR LM SPI FYP F+
Sbjct: 217 LL-IKDISISFEEDEPLLPFEQLLCVLPSNSSHCLPKMYRELMLKNESPIVDFYPKTFKE 275
Query: 572 DMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVHPQHPLYQQ 631
+ NGK+F +Q +V LPF++++ ++R + L+ LT+EE RN L+ +Y+ H L ++
Sbjct: 276 EENGKKFKYQWIVLLPFVEKERIIRFARDLDDTLTDEEKKRNRRGLNKIYMSSTHILSKK 335
Query: 632 ITLYCQLY 639
IT + Y
Sbjct: 336 ITTSMRTY 343
>gi|312371116|gb|EFR19376.1| hypothetical protein AND_22597 [Anopheles darlingi]
Length = 374
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 76/164 (46%), Positives = 102/164 (62%), Gaps = 2/164 (1%)
Query: 450 GYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFA 509
YK YY K ++ E V+ + Y+ L W YYY+ V SW W+YP+HYAPF
Sbjct: 31 SYKRNYYMTKMGYADFNE--DVRAEQAECYIRALQWTLHYYYRGVVSWSWYYPHHYAPFI 88
Query: 510 SDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDF 569
SD+ L++ F + PF PF QL+ LPAAS S LP Y LM DP+SP+Y FYPP+F
Sbjct: 89 SDVDHFDHLKLEFDMARPFLPFQQLLSVLPAASKSHLPAAYHQLMIDPNSPVYDFYPPEF 148
Query: 570 QIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRN 613
D+NGK+ +W+ VV +PFIDE+ LL+ K + +LT+EE RN
Sbjct: 149 STDLNGKQQSWEAVVLIPFIDERRLLKAMKTCDEYLTDEEKQRN 192
>gi|385303535|gb|EIF47601.1| 5 -3 exoribonuclease 1 [Dekkera bruxellensis AWRI1499]
Length = 646
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 82/171 (47%), Positives = 109/171 (63%), Gaps = 2/171 (1%)
Query: 451 YKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFAS 510
+K +YY +K + +E DK+ D+ YVEGL WV YYY+ VCSW W+Y YHYAP S
Sbjct: 105 WKNQYYKEKLHFTLDDE-DKIT-DLTENYVEGLQWVLNYYYKGVCSWPWYYHYHYAPRIS 162
Query: 511 DLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQ 570
D+ +++ F +G+PF+PF QLMG LPA S LP Y+ LMTD SPI FYP D +
Sbjct: 163 DVSRGLGVKLNFKMGQPFKPFQQLMGVLPARSRRLLPACYQELMTDAKSPIIDFYPNDCE 222
Query: 571 IDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLY 621
DMNGK W+ VV L F+DEK L++ L+ +LT EE RN+ +LL+
Sbjct: 223 TDMNGKTAPWEAVVLLSFVDEKRLIKVMTPLDKYLTPEEKQRNTFGRNLLF 273
>gi|290992975|ref|XP_002679109.1| 5'-3' exoribonuclease [Naegleria gruberi]
gi|284092724|gb|EFC46365.1| 5'-3' exoribonuclease [Naegleria gruberi]
Length = 1047
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 122/409 (29%), Positives = 190/409 (46%), Gaps = 86/409 (21%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDG--EGVARPVDVSK---PNPNGMEFDNLYLD 55
MGVP F WL + +V++ + + D + + P++ + DN Y+D
Sbjct: 1 MGVPGFIYWL-------VTNVIDTNDKKDAADDKIVYPINKQSILVQDILKQRVDNFYID 53
Query: 56 MNGIIHPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQ 115
+NG+IHPC HP P + DD+ K I + + V+P L Y+A+DGVAP AK QQ
Sbjct: 54 LNGLIHPCCHPQTGKKPENEDDMMKRITAELLQLARTVQPNNLFYIAVDGVAPAAKQEQQ 113
Query: 116 RTRRFRAAKD-----------AAEAEAEEERLRKEFEEA--------GKLLSA-----KE 151
R RRF A + +E E++ L KE +E+ KLL + +
Sbjct: 114 RHRRFVAISENEQKLKFIGRIQSEITKEKDELTKEIKESEVDKIQQREKLLDSAIARMEA 173
Query: 152 KPETCDSNVITPGTQFMAVLSAALQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMS 211
K D NVI+PGT FM + + + + P KVI+SD++VPGEGEHKI+S
Sbjct: 174 KKNHWDHNVISPGTPFMMKCMSTVHQAAKLIATEFP---HIKVIVSDSSVPGEGEHKILS 230
Query: 212 YIRLQRNLPGFD-PNTRHCLYGLDADLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQ 270
Y++ ++ + + H ++GLDADLIML+ +I LP K F
Sbjct: 231 YMKREKAINSKEFSEMLHVVHGLDADLIMLT------------SLIGLP----KIF---- 270
Query: 271 VGHLAAECHGKPGDNPADWNGVDDTPIHKKKYQFLNIWVLREYLQ-------YELDIPNP 323
+ ++ ++K+ + NI L + ELD +
Sbjct: 271 -----------------SYRDSENVRMNKRDKELFNISELGRHFARVIYSSIAELDTSSK 313
Query: 324 PFPINFE--RIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHVYRR 370
I++ V D V L FVGNDFLP++P+L + A +++M+ Y +
Sbjct: 314 SQNIDWSNANFVSDVVLLLMFVGNDFLPNVPSLVMHNHAASIIMYSYAK 362
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/162 (36%), Positives = 87/162 (53%), Gaps = 14/162 (8%)
Query: 472 KKDVVLKYVEGLCWVCRYY-YQDVCSWQWFYPYHYAPFASDLKDLSDLEI---------T 521
+K +V +Y+ G+ W YY Y D SW W YP HYAP D+ D D EI T
Sbjct: 544 RKTLVKEYLRGIVWAFNYYSYNDPPSWYWRYPEHYAPVMCDILDCYD-EINDEYIKDITT 602
Query: 522 FFLGEPFRPFDQLMGTLPAASSSA-LPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAW 580
F GEP + QL+ LP S A LP+ Y +++ +P + KF+P +F+ D N +
Sbjct: 603 FEKGEPLTAYQQLISILPKESMEACLPKTYTDILNNPK--LDKFFPKEFEKDGNFSGIVY 660
Query: 581 QGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYV 622
+ V LP ID L+ TK+++ L+EEE +N +D++Y
Sbjct: 661 KAVSLLPSIDLDLVKNITKEIDPLLSEEESRKNKFGIDVIYT 702
>gi|71033443|ref|XP_766363.1| 5'-3' exonuclease [Theileria parva strain Muguga]
gi|68353320|gb|EAN34080.1| 5'-3' exonuclease, putative [Theileria parva]
Length = 534
Score = 162 bits (409), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 143/569 (25%), Positives = 235/569 (41%), Gaps = 106/569 (18%)
Query: 46 GMEFDNLYLDMNGIIHPCFHPDGKPAPTSYDDV-FKSIFDYIDHIFLLVRPRKLLYLAID 104
G D Y+DMN +IH H + P D + I + + F LV P+K++Y+ +D
Sbjct: 62 GRGVDYFYVDMNAVIHSATHGNLFPVLMMEDQQRMRRIVTAMLNTFKLVNPKKMMYIGVD 121
Query: 105 GVAPRAKMNQQRTRRFRAAKDAAEAEAEEERLRKEFE-EAGKLLSAKEKPETCDSNVITP 163
GV P AK+NQQRTRRFR K ++ + E + + KL T + + I+P
Sbjct: 122 GVCPSAKINQQRTRRFRLYKSSSSDNEYYKGENGEMKYKVNKLKVGAYDNVTFNPSYISP 181
Query: 164 GTQFMAVLSAALQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFD 223
GTQFM+++ + ++ +I A N W ++ S +VPGEGEHKI IR L
Sbjct: 182 GTQFMSMMDSEIRNWI-ALQNYEGTWNDCYIVYSGTDVPGEGEHKIYDTIRKMVELDDNV 240
Query: 224 PNTRHCLYGLDADLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPG 283
+ H +YGLDADL+MLSL + LP K ++ + + K
Sbjct: 241 KKSTHLVYGLDADLVMLSL------------ITKLP----KMYILREEHNFTPHILSKEK 284
Query: 284 DNPADWNGVDDTPIHKKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFV 343
NP Y E D F + DF L F
Sbjct: 285 PNP--------------------------YFSKETD---HVFKVYESFWNYDFSLLSFMA 315
Query: 344 GNDFLPHMPTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQ 403
GNDFLPH+PT+E+ + N L+++Y + + G+LT ++ R++ ++ + E +
Sbjct: 316 GNDFLPHLPTVELCNSSFNDLINMYYKMLPKLRGFLTQTYKINTSRLQLLMKELCKNEFE 375
Query: 404 IFQKRTRIQQAYEYNEAMKLNARRESSEELLQAPVAVADTVKLGEPGYKERYYADKFEIS 463
F+ + ++ +Y++ K Y + YY +K
Sbjct: 376 YFKMKAMSEKISDYSDPKK----------------------------YAKYYYENKC--- 404
Query: 464 NPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDLEITFF 523
+ID K + K E V Y + +C +F Y + +
Sbjct: 405 ---DIDFNNKKAIRKMCEQYIEVKSYKF--MCFRGYFGRYRTITWGA------------- 446
Query: 524 LGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGV 583
Q+ + ++ + ++ S + +++P DF+I +GK W+ V
Sbjct: 447 ---------QVGIGVINTTTRRWYQTWQRFQELQLSSLCQYFPEDFEICEDGKDNEWEHV 497
Query: 584 VKLPFIDEKLLLRQTKKLEVFLTEEELFR 612
VKLPF+D K L + + L L++
Sbjct: 498 VKLPFLDTKHLCEVARSVNDELKYNNLYK 526
>gi|312085747|ref|XP_003144802.1| hypothetical protein LOAG_09226 [Loa loa]
Length = 1443
Score = 161 bits (408), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 77/165 (46%), Positives = 103/165 (62%), Gaps = 6/165 (3%)
Query: 451 YKERYYADKFEISN--PEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPF 508
+K YY DK + SN EE+ ++ Y+ + W YYY CSW WFYP+HYAP+
Sbjct: 304 HKRDYYNDKMKYSNISKEEL----REQAEGYIRAIQWNLHYYYHGCCSWSWFYPHHYAPY 359
Query: 509 ASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPD 568
SD+ D +++E+ F L EPF+PF+QL+ LPAAS+ LP YR LM+DP SPI FYP
Sbjct: 360 ISDVSDFAEMEMNFDLSEPFKPFEQLLAVLPAASADCLPLPYRELMSDPKSPIIDFYPEQ 419
Query: 569 FQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRN 613
F D+NGK+ W+ VV +PFI E LL+ + LT+EE RN
Sbjct: 420 FDTDLNGKKNDWEAVVLIPFIREDRLLQAMAIKDPLLTDEERKRN 464
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/223 (32%), Positives = 113/223 (50%), Gaps = 41/223 (18%)
Query: 210 MSYIRLQRNLPGFDPNTRHCLYGLDADL-----IMLSLATHEIHFSILREVITLPGQQEK 264
M +IR +R+ +D NTRHCLYGLDADL IML + +HE HF++LRE + Q+
Sbjct: 1 MDFIRSERSRSDYDANTRHCLYGLDADLASFLQIMLGICSHEPHFALLREEVKFGRQR-- 58
Query: 265 CFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIHKKKYQFLNIWVLREYLQYELDIPNP- 323
+ NG T +++ + L++ +LREYL +E
Sbjct: 59 -----------------------NHNGKHKTGVNEITFHLLHLSLLREYLSWEFHSLKEK 95
Query: 324 -PFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHVYRREFTAMGGYLTDA 382
PF + E ++DD+V + F VGNDF+PH+P + I E A+ LL Y + GY+ +A
Sbjct: 96 LPFEYDLESVIDDWVLMGFLVGNDFIPHLPHVHIHEDALPLLYATYNEVLPQLDGYINEA 155
Query: 383 GEVLLDRVEKFIQSVAV---------YEDQIFQKRTRIQQAYE 416
G + L R E F+++ A +D+ + RI A++
Sbjct: 156 GVLNLKRFEIFLKNFAKNDRKNFIEQMDDEAYLSSKRISNAWK 198
>gi|90078106|dbj|BAE88733.1| unnamed protein product [Macaca fascicularis]
Length = 417
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 87/217 (40%), Positives = 119/217 (54%), Gaps = 15/217 (6%)
Query: 451 YKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFAS 510
YK YY K + D D YV+ + W+ YYY V SW W+YPYHYAPF S
Sbjct: 25 YKRTYYMTKMGVDIVS--DDFLADQAACYVQAIQWILHYYYHGVQSWSWYYPYHYAPFLS 82
Query: 511 DLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQ 570
D++++S L I F LG+PF+PF+QL+ LPAAS + LP Y++LMT SPI ++YPPDF+
Sbjct: 83 DIRNISTLRIHFELGKPFKPFEQLLAVLPAASKNLLPTCYQHLMTSEDSPIIEYYPPDFK 142
Query: 571 IDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVM----------LDLL 620
D+NGK+ W+ VV +PFIDEK LL + L +EE RN + +
Sbjct: 143 TDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEERKRNQHSECLMCWYDRDTEFV 202
Query: 621 YVHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVNAS 657
Y P + I C Y + AW +D+N +
Sbjct: 203 YPSPWPEKFPAIERCCTRYKIISLD---AWRVDINKN 236
>gi|357289551|gb|AET72864.1| 5'-3' exoribonuclease [Phaeocystis globosa virus 12T]
gi|357292303|gb|AET73639.1| 5'-3' exoribonuclease [Phaeocystis globosa virus 14T]
Length = 526
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 144/569 (25%), Positives = 238/569 (41%), Gaps = 90/569 (15%)
Query: 51 NLYLDMNGIIHPCFHPDGKPAPTSYDD-VFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPR 109
NLY+D N II+ + +++ + +++ D I+ I ++P K + LA DGV P
Sbjct: 29 NLYIDSNSIIYDAIDFSLFQNKSQFENHIIQTVIDKIELIITTIKPTKNIILAFDGVPPF 88
Query: 110 AKMNQQRTRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMA 169
AK+NQQ+ RR++ + + L +K P D+ ITPGT+FM
Sbjct: 89 AKLNQQKNRRYKTSYQST-------------------LFSKNVP--WDTTAITPGTEFMD 127
Query: 170 VLSAALQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRH- 228
L+ L+ + ++ +ILS ++PGEGEHK+ ++R + N +H
Sbjct: 128 KLNDTLKNHFGDK------YKSNNLILSLTDIPGEGEHKLFEFVR--------NNNHKHD 173
Query: 229 --CLYGLDADLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNP 286
+YG+D+DLIMLSL + SI ++ + H + +P
Sbjct: 174 NTVIYGMDSDLIMLSLNHKKYTNSI--------------YLYRETPHFISSLDSTL--DP 217
Query: 287 ADWNGVDDTPIHKKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGND 346
A +D + + Y L D + +I D++ +CF +GND
Sbjct: 218 AKEYFIDINHLADQIYHLLT--------DKTFDPEKQSIEAYYNKI-SDYILICFLLGND 268
Query: 347 FLPHMPTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQ 406
F H P + +R I +L+ +YR F + D GE+ +K+I +A E Q +
Sbjct: 269 FNEHFPAINLRNNGITILLDLYREIFGVSQNIIKD-GEINWVNFKKYIFKLANNEHQFIK 327
Query: 407 KRTRIQQAYEYNEAMKLNARRESSEELLQAPVA------VADTVKLGEPGYKERYYADKF 460
+ +I+ + K E+ L+ + + E ++ RYY F
Sbjct: 328 ENYKIRDRL----SKKFYPETTDEEKELKFNTTPSWERNIEQFINPHEKHWQYRYYHSLF 383
Query: 461 EISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDLEI 520
I ++ + + V Y+ L W YY +D SW+ Y YHY P DL I
Sbjct: 384 HIDTDKDTNALAS-VCNNYLMTLQWTFYYYSRDCVSWKHSYQYHYPPLLEDLYK----NI 438
Query: 521 TFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKF--------YPPDFQID 572
+F E P D+ + + LP NL+ P++ I +F Y DF+
Sbjct: 439 PYFNSELVIPVDKSIIHPHLLLAYVLPRNSLNLI--PNTKISRFLIKNYPDHYKEDFKFQ 496
Query: 573 MNGKRFAWQGVVKLPFIDEKLLLRQTKKL 601
R+ W+G V P ID + KL
Sbjct: 497 YAFCRYFWEGHVMFPEIDFQQFSNDINKL 525
>gi|393910356|gb|EFO19268.2| hypothetical protein LOAG_09226 [Loa loa]
Length = 1318
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 77/165 (46%), Positives = 103/165 (62%), Gaps = 6/165 (3%)
Query: 451 YKERYYADKFEISN--PEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPF 508
+K YY DK + SN EE+ ++ Y+ + W YYY CSW WFYP+HYAP+
Sbjct: 299 HKRDYYNDKMKYSNISKEEL----REQAEGYIRAIQWNLHYYYHGCCSWSWFYPHHYAPY 354
Query: 509 ASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPD 568
SD+ D +++E+ F L EPF+PF+QL+ LPAAS+ LP YR LM+DP SPI FYP
Sbjct: 355 ISDVSDFAEMEMNFDLSEPFKPFEQLLAVLPAASADCLPLPYRELMSDPKSPIIDFYPEQ 414
Query: 569 FQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRN 613
F D+NGK+ W+ VV +PFI E LL+ + LT+EE RN
Sbjct: 415 FDTDLNGKKNDWEAVVLIPFIREDRLLQAMAIKDPLLTDEERKRN 459
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/218 (33%), Positives = 113/218 (51%), Gaps = 36/218 (16%)
Query: 210 MSYIRLQRNLPGFDPNTRHCLYGLDADLIMLSLATHEIHFSILREVITLPGQQEKCFVCG 269
M +IR +R+ +D NTRHCLYGLDADLIML + +HE HF++LRE + Q+
Sbjct: 1 MDFIRSERSRSDYDANTRHCLYGLDADLIMLGICSHEPHFALLREEVKFGRQR------- 53
Query: 270 QVGHLAAECHGKPGDNPADWNGVDDTPIHKKKYQFLNIWVLREYLQYELDIPNP--PFPI 327
+ NG T +++ + L++ +LREYL +E PF
Sbjct: 54 ------------------NHNGKHKTGVNEITFHLLHLSLLREYLSWEFHSLKEKLPFEY 95
Query: 328 NFERIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLL 387
+ E ++DD+V + F VGNDF+PH+P + I E A+ LL Y + GY+ +AG + L
Sbjct: 96 DLESVIDDWVLMGFLVGNDFIPHLPHVHIHEDALPLLYATYNEVLPQLDGYINEAGVLNL 155
Query: 388 DRVEKFIQSVAV---------YEDQIFQKRTRIQQAYE 416
R E F+++ A +D+ + RI A++
Sbjct: 156 KRFEIFLKNFAKNDRKNFIEQMDDEAYLSSKRISNAWK 193
>gi|83317922|ref|XP_731370.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23491393|gb|EAA22935.1| very similar to mouse Dhm1 and Dhm2-related [Plasmodium yoelii
yoelii]
Length = 387
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 114/414 (27%), Positives = 183/414 (44%), Gaps = 97/414 (23%)
Query: 225 NTRHCLYGLDADLIMLSLATH----------------EIHFSILREV------------- 255
N HC+YGLDADLIMLSL TH IH +++ +
Sbjct: 10 NWNHCIYGLDADLIMLSLVTHLNNIFILRDKFKLTNDSIHNNVVDNIEKMQSEFNVNSES 69
Query: 256 -----------ITLPGQQEKCFVCGQVGHL-AAECHGKPGDNPADWNGVDDTPIHKKKY- 302
+T+ + + + + + +E + +N + N + T + Y
Sbjct: 70 DSGEVDSSEREVTINSESKNITINSESKEIDKSEENKNMANNESLNNCFNKTHKYTHDYY 129
Query: 303 -----------QFLNIWVLREYLQYELDI--------PNPPFPINFERIVDDFVFLCFFV 343
+ L+I+ LR ++ ++ N F IN R+VDD VFL F V
Sbjct: 130 LHYDELNSYDFEILDIYKLRSSIKTQIATYINKLKKEKNIIFSIN--RVVDDIVFLSFLV 187
Query: 344 GNDFLPHMPTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQ 403
GNDFLPH+P ++I EG++N + + Y Y+T +V ++R++ ++ ++ E Q
Sbjct: 188 GNDFLPHIPNIDINEGSMNEIFNSYIFYIYKYSNYITYKDKVHIERLKIVLKILSGQEFQ 247
Query: 404 IFQKRTRIQQAYEYNEAMKLNARRESSEELLQAPVAVADTVKLGEPGYKERYYADKFEIS 463
F+KR + E+ + E YK YY KF +S
Sbjct: 248 YFKKRGINENIPEFTD----------------------------EKKYKSYYYFHKFGVS 279
Query: 464 NPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDLEITFF 523
+ +EI ++ V KY+EGL W YY+ SW W YPYHYAP SDL + F
Sbjct: 280 DSKEIQQI----VKKYIEGLFWNLHYYHFGCASWHWEYPYHYAPLCSDLLSFEKSDFFFE 335
Query: 524 LGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKR 577
G+P+ + L+ LP + LP+ Y+N+ + + F+P + +ID NGK+
Sbjct: 336 KGKPYSAYTHLISVLPQKDKNLLPDPYKNVYAE--DEVKSFFPDNVKIDPNGKK 387
>gi|308081609|ref|NP_001182843.1| uncharacterized protein LOC100501093 [Zea mays]
gi|238007642|gb|ACR34856.1| unknown [Zea mays]
Length = 435
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 85/160 (53%), Positives = 106/160 (66%), Gaps = 2/160 (1%)
Query: 535 MGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLL 594
MG PAAS+ ALP KYR LMTDP+SPI FYP DF++DMNGKRF+WQG+ KLPFI+E L
Sbjct: 1 MGVFPAASAHALPLKYRQLMTDPNSPIIDFYPTDFEVDMNGKRFSWQGIAKLPFIEEDRL 60
Query: 595 LRQTKKLEVFLTEEELFRNSVMLDLLYVHPQHPLYQQITLYCQLYHQLPPQDRFAW--EI 652
L + KK+E LT EE RNS M ++L+V+ H L I + LP +DR A ++
Sbjct: 61 LAEIKKVEDTLTPEEARRNSTMCNMLFVNGAHSLSPYIYSLNSKFGHLPDKDRGAIKEKL 120
Query: 653 DVNASGGMNGYIWLCERNGLRSIIPSPVKGLPDIERNQAM 692
D +ASGGMNGYI LC + + SPV GL DI NQ +
Sbjct: 121 DPSASGGMNGYIALCGGDPSPPVFRSPVDGLEDIMDNQVI 160
>gi|330837844|ref|XP_003292059.1| hypothetical protein DICPUDRAFT_24625 [Dictyostelium purpureum]
gi|325077732|gb|EGC31426.1| hypothetical protein DICPUDRAFT_24625 [Dictyostelium purpureum]
Length = 126
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 76/126 (60%), Positives = 99/126 (78%), Gaps = 4/126 (3%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MG+PAF+RWL D+Y I + E P+ +G+G VD ++ NPNG E+DNLYLDMNGII
Sbjct: 1 MGIPAFFRWLIDKYGGLIQETTE--PR-EGDGSRSKVDFTEMNPNG-EYDNLYLDMNGII 56
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPC HP+ P P S DD+ +SI++Y+D +F ++RPRKL+Y+A+DGVAPRAKMNQQRTRRF
Sbjct: 57 HPCAHPEKGPKPQSVDDMIQSIYEYLDLLFAIIRPRKLIYMAVDGVAPRAKMNQQRTRRF 116
Query: 121 RAAKDA 126
RAA D+
Sbjct: 117 RAALDS 122
>gi|323456482|gb|EGB12349.1| hypothetical protein AURANDRAFT_20690, partial [Aureococcus
anophagefferens]
Length = 186
Score = 159 bits (403), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 89/177 (50%), Positives = 119/177 (67%), Gaps = 1/177 (0%)
Query: 78 VFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRFRAAKDAAEAEAEEERLR 137
+ + I ++D + L+RP +Y A+DGVAPRAKMNQQRTRR+ AA++ AEA A E+ LR
Sbjct: 1 MLRRIEAHLDRLMELMRPTAFVYFALDGVAPRAKMNQQRTRRYVAAQERAEAAAAEDALR 60
Query: 138 KEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQARLNQIPGWQFTKVILS 197
E G+ + ++K D NVITPGT+FM L+ L+ + R P W+ +LS
Sbjct: 61 DELAATGQP-APEKKAAKWDHNVITPGTEFMRKLADFLRAYCARRARSHPRWKHISFLLS 119
Query: 198 DANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIMLSLATHEIHFSILRE 254
DA VPGEGEHKI+SY+R R G+DP T+HC+ G DADLIMLSLA HE +F +LR+
Sbjct: 120 DATVPGEGEHKIISYVRALRQQEGYDPATQHCIVGEDADLIMLSLALHEENFLVLRK 176
>gi|223993125|ref|XP_002286246.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220977561|gb|EED95887.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 182
Score = 159 bits (402), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 82/186 (44%), Positives = 121/186 (65%), Gaps = 11/186 (5%)
Query: 79 FKSIFDYIDHIFL-LVRPRKLLYLAIDGVAPRAKMNQQRTRRFRAAKDAAEAEAEEERLR 137
F+++ Y+D I +V+P++L++LAIDGVAPRAK+NQQR+RR+R+ +E E E +
Sbjct: 1 FQNVCYYLDRIVSDIVQPKQLVFLAIDGVAPRAKLNQQRSRRYRSG---SEKEIEMHLMT 57
Query: 138 KE-----FEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQARLNQIPGWQFT 192
+ +E+ +L ++++ SN ITPGT F+ S + FI+ +L P W
Sbjct: 58 LQPISINSDESAEL--SQDENHGFHSNCITPGTPFLYKCSQRILEFIRHKLQTDPKWHDL 115
Query: 193 KVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIMLSLATHEIHFSIL 252
+I S +VPGEGEHKIM ++R ++N PG+DPN RHC+YG D DL+ML LATHE H +L
Sbjct: 116 TIIFSGHDVPGEGEHKIMDFMRHEKNKPGYDPNLRHCIYGQDGDLVMLGLATHEPHLCLL 175
Query: 253 REVITL 258
RE +
Sbjct: 176 REEVVF 181
>gi|145507550|ref|XP_001439730.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124406925|emb|CAK72333.1| unnamed protein product [Paramecium tetraurelia]
Length = 394
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 84/227 (37%), Positives = 126/227 (55%), Gaps = 6/227 (2%)
Query: 416 EYNEAMKLNARRESSEELLQAPVAVA--DTVKLGEPGYKERYYADKFEISNPEEIDKVKK 473
++ A+K + +E+ QA A + + K YK+RYY +KF I P + + +
Sbjct: 59 KFKSALKDKLTEINQQEIDQAQSAKSSQELKKWKSVSYKQRYYQEKFGI-KPTQFSEFQH 117
Query: 474 DVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQ 533
+ + Y+E L W +YYYQ W WFYPYHYAPFA DL +L F L PF+P+ Q
Sbjct: 118 RIKISYLEALAWTLKYYYQGCVDWGWFYPYHYAPFAQDLTNLDQCMFEFSLNTPFKPYQQ 177
Query: 534 LMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKL 593
L+ LP S+ LP Y+ LM + SS I FYP DF +D+ GK+FAW G V LPF+D
Sbjct: 178 LLAVLPPQSAQFLPRPYQQLMLESSSSIADFYPTDFVVDLKGKKFAWLGEVVLPFVDADR 237
Query: 594 LLRQTKKLEVFLTEEELFRNSVMLDLLYVHPQHPL--YQQITLYCQL 638
L+ + + V L++ E R+ + L++ +H + +QQ + Q+
Sbjct: 238 LISAS-NIGVNLSKLEQERDRLGQTLIFSLKKHEIFNFQQCHIQAQV 283
>gi|154317858|ref|XP_001558248.1| hypothetical protein BC1G_02912 [Botryotinia fuckeliana B05.10]
Length = 185
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 86/204 (42%), Positives = 119/204 (58%), Gaps = 32/204 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP F+RW+++RYP SI ++ E+ EFD LYLDMNGII
Sbjct: 1 MGVPKFFRWMSERYP-SISQLIAEN-------------------RIPEFDCLYLDMNGII 40
Query: 61 HPCFHPDGKPAP--TSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C H D A + + +F +IF+YI+H++ ++P++L Y+A+DGVAPRAKMNQQR R
Sbjct: 41 HNCTHKDSDDATFRMTEEQMFIAIFNYIEHLYGKIKPKQLFYMAVDGVAPRAKMNQQRAR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYF 178
RFR A D A E+A K K + DSN ITPGT+FM L+ L+YF
Sbjct: 101 RFRTALDVENAR----------EKAIKEGKEMPKEDAFDSNSITPGTEFMQKLTLQLKYF 150
Query: 179 IQARLNQIPGWQFTKVILSDANVP 202
I ++++ WQ T+++LS VP
Sbjct: 151 IAKKISEDVDWQGTEIVLSGHEVP 174
>gi|159474632|ref|XP_001695429.1| single-stranded RNA 5'->3' exonuclease [Chlamydomonas reinhardtii]
gi|158275912|gb|EDP01687.1| single-stranded RNA 5'->3' exonuclease [Chlamydomonas reinhardtii]
Length = 171
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 84/201 (41%), Positives = 122/201 (60%), Gaps = 31/201 (15%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MG+P FYRWL++RYPL + + + +++ P E DNLYLDMNGII
Sbjct: 1 MGIPKFYRWLSERYPL----------------LNQKLTLTEGPP---EMDNLYLDMNGII 41
Query: 61 HPCFHPDGKP-APTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRR 119
H C H + K + +D+ +FDY+D + +VRP+KLL++AIDGVAPRAKMNQQR+RR
Sbjct: 42 HNCTHANRKDIGGVTEEDMMLKVFDYLDKLVQIVRPQKLLFMAIDGVAPRAKMNQQRSRR 101
Query: 120 FRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFI 179
F++A + + E E+ R G+++ + DSN ITPGT+FMA L L++FI
Sbjct: 102 FKSAMERLKNEEEQRR-------KGEVVPD----DAFDSNCITPGTEFMARLGKHLRFFI 150
Query: 180 QARLNQIPGWQFTKVILSDAN 200
+ ++ + P WQ V+ S N
Sbjct: 151 RRKMAEDPLWQKPNVVFSGRN 171
>gi|328719013|ref|XP_001945621.2| PREDICTED: 5'-3' exoribonuclease 1-like, partial [Acyrthosiphon
pisum]
Length = 1358
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 70/164 (42%), Positives = 105/164 (64%), Gaps = 2/164 (1%)
Query: 451 YKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFAS 510
+KE YY +K + + D V + Y+ L W YYY CSW W+YP+HYAP+ S
Sbjct: 98 HKENYYKNKLDYN--VITDDVMRSQAEGYIRALQWNLNYYYNGCCSWAWYYPHHYAPYIS 155
Query: 511 DLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQ 570
D+K +L+I F LG+PF P++QL+ LP+ S LP+ +++LMT+ +SPI +YP F+
Sbjct: 156 DIKGFENLKIDFDLGQPFLPYEQLLAVLPSLSKELLPKPFQDLMTEEASPIRLYYPEKFE 215
Query: 571 IDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNS 614
D+NGK+ W+ VV +PFIDE+ L++ K +E LT +E RN+
Sbjct: 216 TDLNGKQHEWEAVVLIPFIDEETLIKSMKMVEHKLTADEKNRNT 259
>gi|283771378|gb|ADB28925.1| exonuclease XRN1 domain [Zea mays subsp. mays]
Length = 236
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 80/198 (40%), Positives = 119/198 (60%), Gaps = 17/198 (8%)
Query: 359 GAINLLMHVYRREFTAMGGYLTDAGEVL--------LDRVEKFIQSVAVYEDQIFQKRTR 410
GA++LL+ VY+ F MGGY+T+ +V + R+E F +++YED+IF KR
Sbjct: 1 GAVDLLIEVYKTTFNKMGGYITNTDKVKDKYGAYLEVSRLETFFHELSMYEDKIFLKRYD 60
Query: 411 IQQAY---EYNEAMKLNARRESSE------ELLQAPVAVADTVKLGEPGYKERYYADKFE 461
++Q Y+E ++ E E +LL D+++LG PG+K R++ + F
Sbjct: 61 LKQDSLLETYHEMLREAPESERPELRQKLDDLLFNEENPYDSIRLGLPGWKSRFFREHFG 120
Query: 462 ISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDLEIT 521
EI K++ D+ KY+EGLCWV + Y+ DV SW W+YP++ APF SDLK LS +EI+
Sbjct: 121 AKTSSEIGKLQNDMAQKYLEGLCWVLQCYFADVPSWSWYYPFYVAPFVSDLKGLSRIEIS 180
Query: 522 FFLGEPFRPFDQLMGTLP 539
F + +P RPFDQLM LP
Sbjct: 181 FTVDKPLRPFDQLMAVLP 198
>gi|385303536|gb|EIF47602.1| 5 -3 exoribonuclease 1 [Dekkera bruxellensis AWRI1499]
Length = 174
Score = 153 bits (386), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 82/191 (42%), Positives = 118/191 (61%), Gaps = 31/191 (16%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MG+P F+R++++R+PL+ +VDG+ + +EFDN+YLDMN I+
Sbjct: 1 MGIPKFFRFISERWPLT-------SQEVDGQEM-------------IEFDNMYLDMNSIL 40
Query: 61 HPCFHP-DGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRR 119
H C H DG S + +F +IF YIDH+F L++P+K+ Y+AIDGVAPRAKMNQQR RR
Sbjct: 41 HNCTHTNDGTIIHLSEEQMFGAIFAYIDHLFNLIKPKKVFYMAIDGVAPRAKMNQQRARR 100
Query: 120 FRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFI 179
FR+A +A E ++K E ++ KE P DSN ITPGT FMA ++ L+Y+I
Sbjct: 101 FRSAVEA------EXNMKKAIERGDEI--PKEAP--FDSNAITPGTDFMAKVTEHLKYYI 150
Query: 180 QARLNQIPGWQ 190
+++ WQ
Sbjct: 151 NQKVSTDSNWQ 161
>gi|258597213|ref|XP_001347750.2| exonuclease, putative [Plasmodium falciparum 3D7]
gi|254832599|gb|AAN35663.2| exonuclease, putative [Plasmodium falciparum 3D7]
Length = 734
Score = 153 bits (386), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 96/312 (30%), Positives = 159/312 (50%), Gaps = 48/312 (15%)
Query: 302 YQFLNIWVLREYLQYELDI--------PNPPFPINFERIVDDFVFLCFFVGNDFLPHMPT 353
++ L+I+ LR ++ ++ N F I R+VDD VFL F VGNDFLPH+P
Sbjct: 441 FEILDIYKLRNSIKTQIATYINKLKKEKNIVFSI--SRVVDDIVFLSFLVGNDFLPHIPN 498
Query: 354 LEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQ 413
++I EG++N +++ Y Y+T +V ++R++ ++ ++ E + F+KR +
Sbjct: 499 IDINEGSMNEILNSYIFYIYKYSNYITYKDKVHIERLKIILKILSAQEFEYFKKRGINEN 558
Query: 414 AYEYNEAMKLNARRESSEELLQAPVAVADTVKLGEPGYKERYYADKFEISNPEEIDKVKK 473
E+ + E YK+ YY KF + +P+EI +
Sbjct: 559 ISEFTD----------------------------EQKYKKYYYLHKFGLEDPKEI----Q 586
Query: 474 DVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQ 533
++V KY+EGL W YY+ SW W YPYHYAP SDL + F G+P+ F
Sbjct: 587 NIVKKYIEGLFWNLHYYHFGCASWYWEYPYHYAPLCSDLLSFEKSDFFFEKGKPYSAFTH 646
Query: 534 LMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFID--- 590
L+ LP + LP+ Y+N+ + + F+P + +ID NGK+ W+ +V LPFI+
Sbjct: 647 LISVLPQKDKNLLPDAYKNIYVE--DEVKSFFPENVKIDPNGKKETWEYIVHLPFINCNM 704
Query: 591 -EKLLLRQTKKL 601
K++ ++K +
Sbjct: 705 INKIITEKSKTI 716
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 89/255 (34%), Positives = 132/255 (51%), Gaps = 44/255 (17%)
Query: 2 GVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGIIH 61
G+P Y+WL YP +++ + Q + VD+ Y+DMNG+IH
Sbjct: 46 GIPRMYKWLTSYYPTVREELINNEKQ-------KSVDI------------FYIDMNGVIH 86
Query: 62 PCFHPDGKPAPTSYDD--VFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRR 119
C H + + P YD+ +F +I Y+ ++F L++P+KL+Y+ +DGV+P+AKMNQQR RR
Sbjct: 87 HCTHANKEKLPI-YDEHELFSNILQYLKNLFYLIKPKKLIYIGVDGVSPKAKMNQQRKRR 145
Query: 120 FRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFI 179
F + K+ + N IT GT FM ++ +L +
Sbjct: 146 FLSI--------------------FKINDNDNTSNLFNPNCITTGTDFMYKINLSLNKWF 185
Query: 180 QARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIM 239
+ + ++F VI S ++V GEGEHKI+ YIR N HC+YGLDADLIM
Sbjct: 186 KILK-KKKVFEFD-VIFSGSDVAGEGEHKILKYIRENCKRDSNFKNYNHCIYGLDADLIM 243
Query: 240 LSLATHEIHFSILRE 254
LSL TH + ILR+
Sbjct: 244 LSLVTHLNNIFILRD 258
>gi|389583613|dbj|GAB66347.1| 5'-3' exoribonuclease [Plasmodium cynomolgi strain B]
Length = 638
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 95/336 (28%), Positives = 159/336 (47%), Gaps = 64/336 (19%)
Query: 296 PIHKKKYQFLNIWVLREYLQYELDI------PNPPFPINFERIVDDFVFLCFFVGNDFLP 349
P++ ++ L+++ LR ++ ++ N R+VDD VFL F VGNDFLP
Sbjct: 320 PLNSYDFEILDVYKLRNSIRTQIATYINKLKKEKNVIFNITRVVDDIVFLSFLVGNDFLP 379
Query: 350 HMPTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRT 409
H+P ++I EG++N +++ Y YLT +V + R++ ++ ++ E F KR
Sbjct: 380 HIPNIDINEGSMNEILNAYIYYIYRYNNYLTLKDKVHIQRLKIILKILSAQEFSYFLKRG 439
Query: 410 RIQQAYEYNEAMKLNARRESSEELLQAPVAVADTVKLGEPGYKERYYADKFEISNPEEID 469
+ E+ + E YK YY KF + +P++I
Sbjct: 440 NAENVREFTD----------------------------ESRYKGYYYLQKFGLEDPKQI- 470
Query: 470 KVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDLEITFFLGEPFR 529
+ +V KY+EGL W YY+ SW W YPYHYAP SDL + F G+P+
Sbjct: 471 ---QHIVNKYIEGLFWNLHYYHFGCASWCWEYPYHYAPLCSDLLSFEKSDFFFEKGKPYS 527
Query: 530 PFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRF----------- 578
+ L+ LP ++ LPE Y+N+ ++ + F+P + +ID NGK++
Sbjct: 528 AYTHLISVLPQKDNNLLPEAYKNIYSE--DEVKSFFPENVRIDPNGKKYVLEEGAILTGL 585
Query: 579 ---------AWQGVVKLPFID----EKLLLRQTKKL 601
W+ +V LPFI+ K++ ++KK+
Sbjct: 586 PPAQSPIGETWEYIVHLPFINCNTINKIITERSKKI 621
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 87/251 (34%), Positives = 124/251 (49%), Gaps = 46/251 (18%)
Query: 7 YRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGIIHPCFHP 66
Y+WL YP +++ + Q E D Y+DMNG+IH C H
Sbjct: 2 YKWLTSYYPTVREELINNERQ-------------------KEVDIFYVDMNGVIHHCTHA 42
Query: 67 DGKPAPTSYD-DVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRFRAAKD 125
+ + P + ++ +I Y+ ++F LV+P+ L+Y+ +DGV+P+AKMNQQR RRF +
Sbjct: 43 NKETLPVHDEHELLSNILKYLKNLFHLVKPKNLVYVGVDGVSPKAKMNQQRKRRFLSL-- 100
Query: 126 AAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQ--ARL 183
K+ + N IT GT FM ++ AL + Q +
Sbjct: 101 ------------------FKVSDNSNGANLFNPNCITTGTDFMYKINLALNKWFQILKKK 142
Query: 184 NQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIMLSLA 243
N P VI S ++VPGEGEHKI+ +IR N HC+YGLDADLIMLSL
Sbjct: 143 NIFP----FDVIFSGSDVPGEGEHKILKFIRENCKRDAAFRNYNHCIYGLDADLIMLSLV 198
Query: 244 THEIHFSILRE 254
TH + ILR+
Sbjct: 199 THLNNIFILRD 209
>gi|339906034|ref|YP_004732831.1| hypothetical protein WIV_gp048 [Wiseana iridescent virus]
gi|308051904|gb|ADO00391.1| hypothetical protein [Wiseana iridescent virus]
Length = 566
Score = 152 bits (384), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 164/624 (26%), Positives = 256/624 (41%), Gaps = 133/624 (21%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDN---LYLDMN 57
MG+ F++W D +P ++ + Q + +A D + +G+ +N L LD+N
Sbjct: 1 MGIKYFFKWFKDSFPKTVKKPFGREDQNLRDALANCED----DVDGL--NNPFLLLLDLN 54
Query: 58 GIIHPC---------FHPDG---KPAPTSYDD----VFKSIFDYIDHIFLLVRPRKLLYL 101
GIIH F P K P + + VF+ + + I+ + + + P++++ L
Sbjct: 55 GIIHTSCQKIYKYGSFEPKSLLKKSPPINSGEKDLLVFEDVLNSINSLVVKIDPKEIV-L 113
Query: 102 AIDGVAPRAKMNQQRTRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVI 161
IDGVAP +K QQR RRF + K DSN I
Sbjct: 114 CIDGVAPISKQIQQRQRRFLSKKTNG---------------------------GFDSNCI 146
Query: 162 TPGTQFMAVLSAALQYFIQARLNQIPGW-QFTKVILSDANVPGEGEHKIMSYIRLQRNLP 220
+PGT+F+ L L+ I+ +L + W T + D+ VPGEGEHK+ ++R
Sbjct: 147 SPGTEFLYKLGLYLKSNIEKKLEK--DWLNVTTIYFMDSLVPGEGEHKLFDFLR-SNQAK 203
Query: 221 GFDPNTRHCLYGLDADLIMLSLATHEIHFS-----ILREVITLPGQQEKCFVCGQVGHLA 275
+ N + G DADLIMLSL I ILRE
Sbjct: 204 IINENMGIIVVGNDADLIMLSLLISTIFLKENLIYILRE--------------------- 242
Query: 276 AECHGKPGDNPADWNGVDDTPIHKKKYQFLNIWVLREYLQYELDIPNPPFP-INFERIVD 334
D K Y ++I L++ + + P F +FE +V
Sbjct: 243 ------------------DLTSKKLDYLLISITQLKKNI-LNFAMEKPKFKHYDFEYVVC 283
Query: 335 DFVFLCFFVGNDFLPHMPTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFI 394
DFV LCF VGNDFLP +P I +G ++L+M Y FT GYLT+ V L +
Sbjct: 284 DFVILCFMVGNDFLPPIPLFNIYDGGLDLMMKYY---FTT-PGYLTN---VPLSNTVQGT 336
Query: 395 QSVAVYEDQIFQKRTRIQQAYEYNEAMKLNARRESSEELLQAPVAVADTVKLGEPGYKER 454
+++ + + + + R +L + +A ++ G
Sbjct: 337 KNLKINLKNLMKYFNHLLVVTSPQAIQHYKTREYGFPNIL---LDIASKKEITLEGITSH 393
Query: 455 YYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQD--VCSWQWFYPYHYAPFASDL 512
Y+ + I + K+ K +V YV+ + WV YY W+ +YP +AP DL
Sbjct: 394 YFKS-YSIHH-----KINKKLVQLYVKEIEWVFNYYTYGGFTVDWKMYYPSQFAPTPVDL 447
Query: 513 ---KDLSDLEITFFLGEP------FRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYK 563
S + G PF QL+ LP SS LP+ ++ + S
Sbjct: 448 LHYLKTSKHQFAQSCGTSIPQTHQIDPFYQLLCILPPHSSDLLPKPLNKVLLENLS---H 504
Query: 564 FYPPDFQIDMNGKRFAWQGVVKLP 587
F+P + ID++GK W+G+ LP
Sbjct: 505 FHPKEIDIDLSGKLNEWEGIPILP 528
>gi|402582600|gb|EJW76545.1| hypothetical protein WUBG_12547, partial [Wuchereria bancrofti]
Length = 123
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 70/112 (62%), Positives = 87/112 (77%), Gaps = 1/112 (0%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPAF+RWL +YP +VD VEE P+ D G+ PV+ PNPN EFDNLYLDMNGII
Sbjct: 7 MGVPAFFRWLTRKYPSVVVDAVEEKPR-DLNGIRVPVNTVDPNPNFQEFDNLYLDMNGII 65
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKM 112
HPC HP+ +P P + +++F IF+YID +F +VRPRKLLY+AIDGVAPRAK+
Sbjct: 66 HPCTHPEDRPCPKTEEEMFMLIFEYIDRLFAIVRPRKLLYMAIDGVAPRAKV 117
>gi|66804489|ref|XP_635977.1| hypothetical protein DDB_G0289921 [Dictyostelium discoideum AX4]
gi|60464324|gb|EAL62473.1| hypothetical protein DDB_G0289921 [Dictyostelium discoideum AX4]
Length = 1235
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 95/314 (30%), Positives = 157/314 (50%), Gaps = 35/314 (11%)
Query: 302 YQFLNIWVLREYLQY---ELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIRE 358
+ ++NI R YL+Y E + INF R+++DF LCF++GNDFLPH+P++ I+
Sbjct: 616 FDYVNIDSFRTYLEYYFFEKIEKSKREKINFNRVINDFTVLCFYLGNDFLPHLPSVGIQS 675
Query: 359 GAINLLMHVYRREF-TAMGG-----YLTDAGEVLLD--RVEKFIQSVAVYEDQIFQKRTR 410
G+I L+M YR + G Y+ + L+ ++S+A +E ++ +
Sbjct: 676 GSIELIMCWYREWIQNCLNGDDDIKYIVNEQSTHLNFENCLPLLESLADWESSLYPENLE 735
Query: 411 IQQAYEYNEAMKLNARRESSEELLQAPVAVADTVKLGEPGYKERYYADKFE-ISNP-EEI 468
Q ++ + K + ESS ++ P D + YY KF+ I P +++
Sbjct: 736 KQVKKDFIKVNKNSTSNESSSIVMVPPEFKYDDL---------LYYRVKFDLIGKPDDQV 786
Query: 469 DKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDL------------KDLS 516
K+ D+ +Y GL WV RYY +W W+YPYHYAP A DL +++
Sbjct: 787 KKLVDDMCYQYTLGLHWVLRYYVSGCQAWDWYYPYHYAPLAKDLLNYQKRLSKIQDREMV 846
Query: 517 DLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGK 576
+ + F L P P L LP S + LP+ ++++ + +SP Y D++ D NG+
Sbjct: 847 NNQFNFKLSSPLPPLIHLASVLPRNSVAFLPDSMKHIVNE-NSPFTASYRDDYKYDFNGE 905
Query: 577 RFAWQGVVKLPFID 590
AW+ +V L F+D
Sbjct: 906 NVAWKAIVLLDFMD 919
Score = 139 bits (350), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 104/326 (31%), Positives = 149/326 (45%), Gaps = 90/326 (27%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MG+P+FYRWL + +P V+E + ++GE ++F+NLY+DMNG++
Sbjct: 1 MGIPSFYRWLIENFP----KVLENN--LNGE---------------IKFNNLYIDMNGVV 39
Query: 61 HPCFHPDGK--------------------------------PAPTSYDDVFKSIFDYIDH 88
H D + S + + + IF +D
Sbjct: 40 HNAIKLDHSPTSSSSSSSTTTTPPTTPTTTYSKDKEVVLMLKSELSDEKLKERIFYRLDQ 99
Query: 89 IFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRFRAAKDAAEAEAEEERLRKEFEEAGKLLS 148
+ V P LLY+ +DGV PRAK +QR RRF+++K+ + K L
Sbjct: 100 MVNNVNPSSLLYIGVDGVPPRAKAIEQRKRRFKSSKETVDV-------------IIKQLK 146
Query: 149 AKEKPET-----------CDSNVITPGTQFMAVLSAALQ-YFIQARLNQIPGWQFTKVIL 196
+K KP T DSN I+P T+F+ + ++ Y Q L + Q +IL
Sbjct: 147 SKSKPITRDSIIEQFSLIFDSNSISPATEFIEKVDDWIKDYCKQLSLKR----QNLSIIL 202
Query: 197 SDANVPGEGEHKIMSYIRLQRNLPGFDPN-TRHCLYGLDADLIMLSLATHEIHFSILREV 255
SD+ VPGEGEHKIM YIR +N P + HC YG+DADLI L L +H +F ILR+
Sbjct: 203 SDSTVPGEGEHKIMDYIR--QNHPILKKDGMSHCFYGMDADLIFLGLESHLSNFYILRDP 260
Query: 256 ITLPGQQEKCFVC-GQVGHLAAECHG 280
I+L C C H EC
Sbjct: 261 ISLIS----CSTCKANDDHSNYECRS 282
>gi|406601834|emb|CCH46557.1| 5'-3' exoribonuclease 1 [Wickerhamomyces ciferrii]
Length = 491
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 139/515 (26%), Positives = 218/515 (42%), Gaps = 98/515 (19%)
Query: 46 GMEFDNLYLDMNGIIHPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDG 105
G + DNLY+DMN I H C D K S D I ++ + P KLLY+AIDG
Sbjct: 22 GKQCDNLYIDMNCIFHICLR-DAK----SEKDFKDLILAHLQMVTAAYCPHKLLYIAIDG 76
Query: 106 VAPRAKMNQQRTRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGT 165
V P K+ Q RR + + ++G + D N +TPGT
Sbjct: 77 VPPLGKLKGQALRR------------------QSYIKSGNGI---------DPNALTPGT 109
Query: 166 QFMAVLSAALQYFIQARLNQIPGWQFT-KVILSDANVPGEGEHKIMSYIRLQRNLPGFDP 224
+FM +LS Q+ + + +P KVI+SD+NVPGEGE KI+++IR Q D
Sbjct: 110 EFMNMLS---QFITKCTGSHLPKLSSNVKVIISDSNVPGEGEFKIVNHIREQ------DI 160
Query: 225 NTRHCLYGLDADLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGD 284
+ + +YG+DADLI LSL+ +Q + F+ Q K G
Sbjct: 161 DMKVVIYGIDADLIALSLSL----------------KQRQVFLARQ--------KYKRGV 196
Query: 285 NPADWNGVDDTPIHKKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVG 344
+ + + K +FL + + +N I+ D V L +G
Sbjct: 197 TTSRSRQCEYLIVSSLKNKFLEPYSNEQ-----------KSSLNTTNILKDIVLLLILLG 245
Query: 345 NDFLPHMPTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQI 404
NDFLP L + L +R + + D KF++ ++ Q
Sbjct: 246 NDFLPKPEGLYVNSDTYYELSWFLQRFHREENKTIIKDNRIDTDVFTKFLKKFIEFDFQT 305
Query: 405 FQKRTRIQQAYEYNEAMKLNARRESSEELLQAPVAVADTVKLGEPGYK--------ERYY 456
F + T + Q + + + A +++++T K E K E +
Sbjct: 306 FDESTIMDQKVIDEKIISIKL----------AGISISNTEKDEEENVKKLAQMECFEEHK 355
Query: 457 ADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLS 516
+E + E+ D++ +++ +Y +GL WV RYY S+ + YPY APF SDL ++
Sbjct: 356 KKVYEQNLCEKYDEL--ELIKQYYKGLHWVLRYYLGKCPSYDYVYPYDNAPFLSDLVKVN 413
Query: 517 DLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYR 551
++ F EP QL +P SS LP +Y+
Sbjct: 414 Q-DVEFVNTEPINALHQLALVIPKKSSILLPSRYK 447
>gi|123490419|ref|XP_001325606.1| XRN 5'-3' exonuclease N-terminus family protein [Trichomonas
vaginalis G3]
gi|121908508|gb|EAY13383.1| XRN 5'-3' exonuclease N-terminus family protein [Trichomonas
vaginalis G3]
Length = 939
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 139/570 (24%), Positives = 235/570 (41%), Gaps = 131/570 (22%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGV F RWLA+RYPL+ Q+D DVSKP FD Y+D N II
Sbjct: 1 MGVTFFTRWLAERYPLAF-------RQMD--------DVSKPT-----FDCFYIDFNAII 40
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
+ + ++D + I Y+D I +VRP KL+YL++DG P AK + R+ R
Sbjct: 41 YFALSYYNPESEGNFDGIITEIIRYLDTIIQIVRPTKLIYLSVDGTPPYAKCVRNRSSRL 100
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQ 180
++++ + +FE I G+ FM L L I+
Sbjct: 101 AGFM----KNQKQDKSQIQFE-------------------IVAGSVFMEKLHQELIKTIE 137
Query: 181 ARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
++ W K I S +VPGE EHKI +IR F + H ++ +D+D I L
Sbjct: 138 NKVKTDIAWSTPKFIYSSYHVPGEAEHKITKFIRDSTTQNNFLNDYVHLVFSVDSDTIFL 197
Query: 241 SLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIHKK 300
L + + +RE K F + +A
Sbjct: 198 LLGLNMKYLVTMREA--------KNFTVNEKSSSSA------------------------ 225
Query: 301 KYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGA 360
++ + I +++EY+ EL + RI++DF+ L F GNDF+P L
Sbjct: 226 -FELIYISIIQEYIMEELK--------SDRRIINDFIALVFLCGNDFIPEFSELPSSPET 276
Query: 361 INLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFI-QSVAVYEDQIFQKRTRIQQAYEYNE 419
++ Y + + + G LL+ KF+ +++ + D+I N
Sbjct: 277 FESILDCYVKT-------IKEKGLFLLNENRKFLFENLEMLFDKIM-----------LNA 318
Query: 420 AMKLNARRESSEELLQAPVAVADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKY 479
A+K + +S+ L + ++ D+++ N + ++++ + + +
Sbjct: 319 AIKGSTTSCASDNL-------------------KEHFPDEYK--NQDFVNELLEQTLTNF 357
Query: 480 VEGLCWVCRYYYQDVCSWQWFYPY-HYAPFASDLKDLSD-LEITFFLGEPFRPFDQLMGT 537
+V YY+ SW + YPY H PF+ L L + E F L +P PF+ + T
Sbjct: 358 E----FVLSYYFGKTPSWSYCYPYEHSPPFSFLLNALKNHKETNFVLDKPLEPFEASLIT 413
Query: 538 LPAASSSALPEKYRNL-MTDPSSPIYKFYP 566
P S +P++ L + + + I K++P
Sbjct: 414 APREGKSGIPKELIALTLEENQNKISKYFP 443
>gi|123428648|ref|XP_001307542.1| XRN 5'-3' exonuclease N-terminus family protein [Trichomonas
vaginalis G3]
gi|121889177|gb|EAX94612.1| XRN 5'-3' exonuclease N-terminus family protein [Trichomonas
vaginalis G3]
Length = 498
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 102/399 (25%), Positives = 173/399 (43%), Gaps = 90/399 (22%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP + +W+ R D Q + P +DNLY+DMN II
Sbjct: 1 MGVPGYLQWILTRI---------SDTQFHHSAKSSP------------YDNLYIDMNSII 39
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
+ + D+ I ID + + RP+K++ +A+DG P AK++QQR+RR+
Sbjct: 40 YYAINKINFKDRLPNQDLVNEIVIKIDELVKMARPKKIILIAVDGCPPTAKISQQRSRRY 99
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQ 180
SA + + D + + PGT+FM L+ L+ +
Sbjct: 100 A-------------------------YSANYQDSSFDLSNVFPGTEFMINLNKLLESQLL 134
Query: 181 ARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
++ W K+ SD PGEGEHKI+ +IR N P + + +Y +D D+I L
Sbjct: 135 NKITNDEIWSKAKLYYSDVFCPGEGEHKIVDFIRSISNDPEYSHSEWSYIYTVDTDVIFL 194
Query: 241 SLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIHKK 300
+L+ H ++S++ E P +
Sbjct: 195 ALSIHNPNYSLIFE-----------------------------------------PQNGS 213
Query: 301 KYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGA 360
+Y ++I +REY+ + + P +FERI+DD+VFL F NDF LE +
Sbjct: 214 QYTVIHIDSIREYIFQQFE---PYCKPDFERIIDDYVFLSFLFKNDFFAGFKELEFCTQS 270
Query: 361 INLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAV 399
+ ++ YR A+GG++ + ++ ++ ++KFI+S +
Sbjct: 271 KDTIITNYRAARKALGGFIVNGNDINIELLKKFIESYLI 309
>gi|343424057|emb|CCD17964.1| 5'-3' exonuclease, putative [Trypanosoma vivax Y486]
Length = 996
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 99/321 (30%), Positives = 142/321 (44%), Gaps = 82/321 (25%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP F WL ++YP DVV + G LY+D+NG+I
Sbjct: 1 MGVPKFASWLRNKYP----DVVSNNCPTSVHG-------------------LYVDLNGLI 37
Query: 61 HPCFHPDGKP--APTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
HPC H + P A + + I ++ + VRP+++LY+A+DGVAPRAKMNQQR R
Sbjct: 38 HPCCHSENDPSIALLPEGEKLECICYEVELLVETVRPQEVLYIAVDGVAPRAKMNQQRAR 97
Query: 119 RF-------RAAKDAAEAE-AEEERLRKEFEEAGKLLSAKEKPETC-------------- 156
R+ RA K + A A+ R EE + ++ E E
Sbjct: 98 RYMSRAVPARADKSPSRASHAKNNRCADVVEEVVREFTSDEIAEANNDLNEVRNLLLQDS 157
Query: 157 ----------------------------------DSNVITPGTQFMAVLSAALQYFIQAR 182
DSN I+PGT FM+ ++ + +Q
Sbjct: 158 LYGQPVPDASVGGNTTVFVPRSDTSTADISAVEFDSNCISPGTAFMSKVADKVLAMLQRN 217
Query: 183 LNQIPG-WQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIMLS 241
+ W VI SD+ PGEGE KI+ ++R Q + PGF+ H + GLDADLI L+
Sbjct: 218 MTSDDSKWSRLCVIFSDSRTPGEGEQKIIDFLRTQSSYPGFNGRGSHVIVGLDADLIFLA 277
Query: 242 LATHEIHFSILREVITLPGQQ 262
L+ H +ILR+ P ++
Sbjct: 278 LSLHIPGVTILRDTTRNPHKR 298
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/298 (23%), Positives = 126/298 (42%), Gaps = 32/298 (10%)
Query: 330 ERIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDR 389
+++DD + + +GNDF+PH+P+ E A++ + +Y + G D+ E+ L +
Sbjct: 466 SKVIDDIILIAMLMGNDFIPHLPSAFCGESALDNFLELYVTDVLPYGFLTIDSYEISLPQ 525
Query: 390 VEKFIQSVAVYEDQIFQKRTRIQQAYEYNEAMKLNARRE--------SSEELLQAPVAVA 441
+ + ++S A E +F++ + A + N RRE S +L+ A
Sbjct: 526 LRRLLESYAKIEAVLFRRHKLLADADQ-------NVRREEAGTGTGVSDGDLMTVSRAAE 578
Query: 442 DTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCS-WQWF 500
+ G++ Y + + + + YV GL +V RYY + W W+
Sbjct: 579 PLNSSVDVGWRNAYLSTT-------GLSERVHEACEAYVNGLRFVWRYYTSSSGTCWSWY 631
Query: 501 YPYHYAPFASDLK------DLSDL-EITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNL 553
YP+H+ P A D+ D+ L ++ EP Q++ P S + LP +
Sbjct: 632 YPFHHGPLALDMAAYLQSCDVGRLPPVSNPATEPPNTLLQMLCVFPPTSHALLPAILGSA 691
Query: 554 MTD--PSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEE 609
M + S + +P + +D + + +PF D + L E LTEEE
Sbjct: 692 MLEKYKSQQLSSSFPKSWSVDYHDSNEKHLAIAMIPFADVRELQPLVDAAEPHLTEEE 749
>gi|355729461|gb|AES09875.1| 5'-3' exoribonuclease 1 [Mustela putorius furo]
Length = 190
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 65/120 (54%), Positives = 87/120 (72%)
Query: 494 VCSWQWFYPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNL 553
V SW W+YPYHYAPF SD++++S L+I F LG+PF+PF+QL+ LPAAS + LP Y++L
Sbjct: 2 VQSWSWYYPYHYAPFLSDIRNISTLKIHFELGKPFKPFEQLLAVLPAASKNLLPTCYQHL 61
Query: 554 MTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRN 613
MT SPI ++YPPDF+ D+NGK+ W+ VV +PFIDEK LL + L +EE RN
Sbjct: 62 MTSEDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEERKRN 121
>gi|328869830|gb|EGG18205.1| hypothetical protein DFA_03692 [Dictyostelium fasciculatum]
Length = 1061
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 95/333 (28%), Positives = 154/333 (46%), Gaps = 44/333 (13%)
Query: 299 KKKYQFLNIWVLREYLQYELDIP-NPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIR 357
++K++F+N+ LR+Y++Y L ++ ++D +C +GNDFLPH+P + I+
Sbjct: 636 ERKFEFVNLDNLRQYIKYYLTFGLENESQLDINNCINDITVMCMLMGNDFLPHLPAVSIK 695
Query: 358 EGAINLLMHVYRR------EFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIF---QKR 408
+G+I L++ Y+ + T YLT ++ + + + +E I+ +R
Sbjct: 696 DGSIELILGWYKDWIHNSIKSTGKVNYLTVDTNIIYSNFSELLNVLGNWESVIYPDKLER 755
Query: 409 TRIQQAYEYNEAMKL--------------NARRESSEELLQAPVAVADTVKLGEPGYKER 454
+ +K+ N R S E + + + L E +
Sbjct: 756 MGKKDLARLTHILKVSKEREDKEKEEAEANGRMASEFEEERNDILTSQLANLQEG--ELN 813
Query: 455 YYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDL-- 512
YY K + S E++ VK+ V YV GL WV +YY W+W Y +HYAP A+DL
Sbjct: 814 YYKLKLQAST-SEVENVKQWVCQSYVRGLSWVLKYYTVGCPDWKWSYNFHYAPLAADLAA 872
Query: 513 -----------KDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPI 561
KD S +E F LG P +P L+ LP S LP +LM S +
Sbjct: 873 YCKEMVVGKGFKDTSHIE--FKLGAPLQPLAHLLSVLPVYSGKFLPAPLADLM--KSKQL 928
Query: 562 YKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLL 594
FY ++ID+NG+ +W+GVV + FID L
Sbjct: 929 STFYRERYRIDLNGEEVSWKGVVLVNFIDVSAL 961
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/145 (40%), Positives = 83/145 (57%), Gaps = 18/145 (12%)
Query: 1 MGVPAFYRWLADRYPLSI---------VDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDN 51
MG+PAFYRWL D+YP SI + E+D P+ + P N ++F+N
Sbjct: 1 MGIPAFYRWLVDKYPKSIQYFQQQQQVEEQQEQDEVSSSSTTTTPLKID-PRCNNVKFNN 59
Query: 52 LYLDMNGIIHPCFHPDGKPA--------PTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAI 103
LY+DMNG+IH H G+P+ P + D + ++IF ++ I + P L+Y+A+
Sbjct: 60 LYIDMNGVIHNSTHAKGEPSVESIMASKPNTDDTIKENIFKRLNDIIVTTNPSDLVYIAL 119
Query: 104 DGVAPRAKMNQQRTRRFRAAKDAAE 128
DGV PRAK +QR RRFR+AKD E
Sbjct: 120 DGVPPRAKATEQRRRRFRSAKDIRE 144
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/152 (36%), Positives = 77/152 (50%), Gaps = 18/152 (11%)
Query: 157 DSNVITPGTQFMAVLSAALQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQ 216
DSN I+P T+FM ++ + +I L + V+LSD VPGEGEHKIM +IR
Sbjct: 216 DSNSISPATEFMNKVNHWIGEYISTVLAK--SHPHLAVVLSDTTVPGEGEHKIMDFIR-- 271
Query: 217 RNLPGFDPNTRHCLYGLDADLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAA 276
N + +T H YG+DADLI L L+ H F +LR+ +L C +C H++
Sbjct: 272 GNHKNWSESTSHIFYGMDADLIFLGLSVHLQRFFVLRDFQSL---SYGCSICKSEYHMSY 328
Query: 277 EC---------HGKPGDNPADW--NGVDDTPI 297
EC H + DW NG++ T I
Sbjct: 329 ECKSALAMKKLHASNKEGDIDWQSNGINTTKI 360
>gi|327409880|ref|YP_004347300.1| XRN1 5'-3' exoribonuclease [Lausannevirus]
gi|326785054|gb|AEA07188.1| XRN1 5'-3' exoribonuclease [Lausannevirus]
Length = 495
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 154/635 (24%), Positives = 243/635 (38%), Gaps = 183/635 (28%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP + W+ R+ ++ + VD NLY+D +
Sbjct: 11 MGVPGLFYWIQQRHSRYTKNIQKGQNTVD---------------------NLYVDAVCFV 49
Query: 61 HPC---FHPDGKPAPTS-----------YDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGV 106
H C + GK S ++F+S+ + I + V P K Y+ DGV
Sbjct: 50 HTCAQDIYGYGKNISLSDTFKDMTEKQKEQELFRSVRNAIFRLTKYVTPTKKFYVVFDGV 109
Query: 107 APRAKMNQQRTRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQ 166
AP AK NQQR RRF K + D N IT GT+
Sbjct: 110 APIAKQNQQRHRRFLGGKPSC---------------------------GFDPNSITCGTE 142
Query: 167 FMAVLSAALQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNT 226
F+ LQ +++ L+ + ++ S ++ GEGEHK +++ R N
Sbjct: 143 FLD----RLQRYVERGLSNFCQKEKFDLVFSSSSEAGEGEHKALAFARNNGN------GE 192
Query: 227 RHCLYGLDADLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNP 286
HC Y D DL++L++A S+LR+ D+
Sbjct: 193 SHCFYSPDGDLVLLTMALGFDKVSLLRQ-----------------------------DHI 223
Query: 287 ADWNGVDDTPIHKKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGND 346
W KY +I L + +++ D+P + DFVFL +GND
Sbjct: 224 QQW-----------KYLLTDISGLSQ--EFQKDVP-----------IKDFVFLSCLLGND 259
Query: 347 FLPHMPTLEIR-EGAINLLMHVY----RREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYE 401
FLP + E + L+ Y RR F+ G A R ++ +E
Sbjct: 260 FLPRLGMFESKFSDTAEFLIAKYKEHGRRIFSEKTGNFIPA------RAFGLFSFLSTFE 313
Query: 402 DQIFQKRTRIQQAYEYNEAMKLNARRE--SSEELLQA--PVAVADTVKLGEPGYKERYYA 457
++F KR +L A++E + LL++ P D K YKE +
Sbjct: 314 KELFDKRC----------VFELTAQKEERTDHTLLKSYSPQNGVDVEK-----YKE-IFG 357
Query: 458 DKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSD 517
K + + + D Y+ G WV YY++ W Y +HY PF LSD
Sbjct: 358 SKKQREDSQAFD---------YIRGCIWVTVYYFRGCPDNGWSYKWHYPPF------LSD 402
Query: 518 LEITFFLGEPFRPFD---------QLMGTLPAASSSALPEKYRNL-MTDPSSPIYKFYPP 567
++ F G+ +PF QL+ LP S LP ++R + +F+P
Sbjct: 403 IKKEHFTGQ--KPFKQSVVPNQLLQLLCVLPPHSMDLLPRRWRKYGGITKREELSEFFPK 460
Query: 568 DFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLE 602
+ +ID GK ++ V LP +D L+ R+ +K++
Sbjct: 461 EVEIDYEGKFRDYENVPLLPHVDVALIQREIQKIQ 495
>gi|340501949|gb|EGR28676.1| hypothetical protein IMG5_170600 [Ichthyophthirius multifiliis]
Length = 698
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 85/265 (32%), Positives = 131/265 (49%), Gaps = 46/265 (17%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP ++ W+ RYP I + + G + VD LY+D+N
Sbjct: 1 MGVPGYFGWICRRYPFCIRKIYQS-------GKKKYVDC------------LYIDVNSFC 41
Query: 61 HPCFHPDGKP---APTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRT 117
+ D P S D ++++I +I+ I L+ P+ +YL +DG PRAKMNQQR
Sbjct: 42 YQYIKDDLNQYLLNPQSLDQIYQNILTHIESIIQLIEPQSQVYLMMDGTCPRAKMNQQRQ 101
Query: 118 RRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQY 177
RRF A K+ + +++F+ G + K +T SN ++PGT FM L+ ++
Sbjct: 102 RRFHAQKNLNQT-------KEDFKNQG----IQIKEQTVPSNSVSPGTPFMFELNKRIRE 150
Query: 178 FIQAR------LNQIPGWQFTK--VILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHC 229
+ + LN+ + + + +I+SD+N GEGEHKI+ IR +N HC
Sbjct: 151 HFEKKIQEEQPLNEKTDFTYKRLHIIISDSNCQGEGEHKILEVIRKHKNFK-----LTHC 205
Query: 230 LYGLDADLIMLSLATHEIHFSILRE 254
+ DADLI+LSL+ ILRE
Sbjct: 206 IVSPDADLILLSLSAIGRKILILRE 230
Score = 43.5 bits (101), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 6/79 (7%)
Query: 331 RIVDDFVFLCFFVGNDFLPHMPTLEIR------EGAINLLMHVYRREFTAMGGYLTDAGE 384
+I+DD VFL F GNDFLP + I+ + ++ L+ +++ YL++ G
Sbjct: 358 KILDDIVFLSLFAGNDFLPKQNYIYIKKTFYKEQHILDKLLCLHKDYLKTAQNYLSERGI 417
Query: 385 VLLDRVEKFIQSVAVYEDQ 403
+ + F Q VA E Q
Sbjct: 418 IQFSNILNFFQIVANLEPQ 436
>gi|330800198|ref|XP_003288125.1| hypothetical protein DICPUDRAFT_87898 [Dictyostelium purpureum]
gi|325081816|gb|EGC35318.1| hypothetical protein DICPUDRAFT_87898 [Dictyostelium purpureum]
Length = 171
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 75/203 (36%), Positives = 113/203 (55%), Gaps = 34/203 (16%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP F+RW+++RYP + +++ P E+DNLYLDMNGII
Sbjct: 1 MGVPRFFRWVSERYPQILQKIIDSTPP--------------------EYDNLYLDMNGII 40
Query: 61 HPCFHPDGKP-APTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRR 119
H C S +++ + + +Y+D +F +RP KL Y+AIDGVAPR+K+NQQR RR
Sbjct: 41 HACSQEFANSLIEFSEEELIRKVCNYVDRLFHTIRPTKLFYMAIDGVAPRSKINQQRQRR 100
Query: 120 FRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETC-DSNVITPGTQFMAVLSAALQYF 178
F + +E+L+++ GK + PE + ITPGTQFM LS ALQ++
Sbjct: 101 FLSVH-------RDEKLKQQLIADGKPV-----PEVIFNRTAITPGTQFMYNLSEALQFY 148
Query: 179 IQARLNQIPGWQFTKVILSDANV 201
I+ ++++ W+ +VI S V
Sbjct: 149 IKKKISEDLSWREVQVIFSGPEV 171
>gi|308160629|gb|EFO63105.1| 5'-3' exoribonuclease 2 [Giardia lamblia P15]
Length = 1954
Score = 132 bits (333), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 121/441 (27%), Positives = 187/441 (42%), Gaps = 107/441 (24%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGME-FDNLYLDMNGI 59
MGV +RW+ +RYPL+ V+ P + + DNLY+D N +
Sbjct: 1 MGVGRLFRWIYERYPLA---------------------VTTPGASFVSRIDNLYIDFNAL 39
Query: 60 IHPCFHPDGK-PAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
IH D P + +F I DYI + V+PRK +++A DGVAP AK QQRTR
Sbjct: 40 IHESIRKDSYIPFTFTEAMIFGEIADYIQVLVSTVQPRKRIFIATDGVAPSAKAKQQRTR 99
Query: 119 RFRAAKDA-------------AEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGT 165
R+ A ++ A +E E L + G P+ + I+PGT
Sbjct: 100 RYMGAYESVGVKLYRNNIAGTATILSEVEFLTSKHIANGNNDDQTLPPQNLKA-AISPGT 158
Query: 166 QFMAVLSAALQYFIQARLN-QIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPG--- 221
FM L + L F+ ++ + PGW V +S ++ GEGEHKIM+ IR + L
Sbjct: 159 LFMDRLHSFLIAFVAKNVDSEAPGWVQPAVTISGWDMCGEGEHKIMAEIRRLKRLEDLAT 218
Query: 222 -------------FDPNTRHCLYGLDADLIMLSLATHEIHFSILR---------EVITLP 259
F + HC+ GLDAD+++L L H + ILR V L
Sbjct: 219 IGVDYSEKSFSEFFPHHESHCICGLDADIVLLGLGLHVHNVYILRLWQPPFVTDTVDILE 278
Query: 260 GQQE---------------KCFVCGQVGH-------LAAECHGKPGDN---------PAD 288
++ +C V + + L A CH + P
Sbjct: 279 SKRHPTDKGLIVVDLSCFRECIVAELISNRFHDPKLLHALCHQSFPHSYMQRLRNCYPRL 338
Query: 289 WNGVDDTPIHKKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFL 348
++D+ + + +++ VL+E + P+ IV DF+ L FVGNDFL
Sbjct: 339 SREMNDSGMLSR----MSLSVLQEAFVWS--------PLGSALIV-DFIILTLFVGNDFL 385
Query: 349 PHMPTLEIREGAINLLMHVYR 369
P +P + I+ +++ + +YR
Sbjct: 386 PEVPGMLIKNNSLDNCIAIYR 406
>gi|432111908|gb|ELK34946.1| 5'-3' exoribonuclease 1 [Myotis davidii]
Length = 1223
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 75/166 (45%), Positives = 104/166 (62%), Gaps = 32/166 (19%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP FYRW+++RYP + +VV+E Q+ EFDNLYLDMNGII
Sbjct: 1 MGVPKFYRWISERYPC-LSEVVKEH-QIP------------------EFDNLYLDMNGII 40
Query: 61 HPCFHPDGKPA--PTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C HP+ S D +F IF Y++ +F +++PRK+ ++A+DGVAPRAKMNQQR R
Sbjct: 41 HQCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGR 100
Query: 119 RFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPG 164
RFR+AK+A E++++K E+ G+ L + + DSN ITPG
Sbjct: 101 RFRSAKEA------EDKIKKAIEK-GETLPTEAR---FDSNCITPG 136
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 61/114 (53%), Positives = 82/114 (71%)
Query: 500 FYPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSS 559
+YPYHYAPF SD++++S L+I F LG+PF PF+QL+ LPAAS + LP Y++LMT S
Sbjct: 263 YYPYHYAPFLSDIRNISTLKIHFELGKPFMPFEQLLAVLPAASKNLLPTCYQHLMTSEDS 322
Query: 560 PIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRN 613
PI ++YPPDF+ D+NGK+ W+ VV +PFIDEK LL + L +EE RN
Sbjct: 323 PIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEERKRN 376
>gi|159110732|ref|XP_001705612.1| 5'-3' exoribonuclease 2 [Giardia lamblia ATCC 50803]
gi|157433699|gb|EDO77938.1| 5'-3' exoribonuclease 2 [Giardia lamblia ATCC 50803]
Length = 1956
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 126/470 (26%), Positives = 194/470 (41%), Gaps = 116/470 (24%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGME-FDNLYLDMNGI 59
MGV +RW+ +RYPL+ V+ P + + DNLY+D N +
Sbjct: 1 MGVARLFRWIYERYPLA---------------------VTTPGASFVSRIDNLYIDFNAL 39
Query: 60 IHPCFHPDGK-PAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
IH D P + +F I DYI + +PRK +++A DGVAP AK QQRTR
Sbjct: 40 IHESIRKDSYIPFTFTEAMIFGEIADYIQVLVSTAQPRKRIFIATDGVAPDAKAKQQRTR 99
Query: 119 RFRAAKD-------------AAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGT 165
R+ A + A +E E L + G P+ + I+PGT
Sbjct: 100 RYMGAYEKIGTKIYRDSIAGTATVLSEAELLTSQHIANGNDDDQTLPPQNVKA-AISPGT 158
Query: 166 QFMAVLSAALQYFIQARLN-QIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPG--- 221
FM L + L F+ ++ + PGW V +S ++ GEGEHKIM+ IR R L
Sbjct: 159 LFMDRLHSFLIAFVAKNVDSEAPGWVQPSVTISGWDMCGEGEHKIMAEIRRLRQLEELAA 218
Query: 222 -------------FDPNTRHCLYGLDADLIMLSLATHEIHFSILR--------------E 254
F + HC+ GLDAD+++L L H + +LR E
Sbjct: 219 SRADCSETSFSEFFPHHESHCICGLDADIVLLGLGLHVHNVYVLRLWQPPFVADTVDILE 278
Query: 255 VITLPGQQE----------KCFVCGQVGH-------LAAECHGK---------PGDNPAD 288
P +E +C V + + L A CH P
Sbjct: 279 SKRHPTDRELIVVDLSCFRECIVAELISNRFHNPKLLHALCHQSFPHTYMQRLKNCYPRL 338
Query: 289 WNGVDDTPIHKKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFL 348
++D+ + + +++ VL+E + P+ IV DF+ L FVGNDFL
Sbjct: 339 SREMNDSGMLSR----MSLNVLQEAFIWS--------PLASALIV-DFIILTLFVGNDFL 385
Query: 349 PHMPTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVA 398
P +P + ++ +++ + +YR A LLD + K I+++
Sbjct: 386 PEVPGMLVKNNSLDNCIAIYRELL---------ADTCLLDELCKNIKNMC 426
>gi|284504336|ref|YP_003407051.1| XRN1 5'-3' exonuclease [Marseillevirus]
gi|282935774|gb|ADB04089.1| XRN1 5'-3' exonuclease [Marseillevirus]
Length = 490
Score = 132 bits (332), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 146/628 (23%), Positives = 238/628 (37%), Gaps = 165/628 (26%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP + W+ R+ + + +P +E DNLY+D +
Sbjct: 1 MGVPGLFYWIQQRHAQHTRTIQKREP--------------------IEVDNLYIDAVCFV 40
Query: 61 HPCFHPD-GKPAPTSYDDVFKSIFD----------YIDHIFLL---VRPRKLLYLAIDGV 106
H C G S+ + +K+ + + IF L VRP K Y+ DGV
Sbjct: 41 HTCAQDVYGYGNSVSFSETYKNFTEKQKELEVFRLTRNAIFALTKYVRPTKRFYVLFDGV 100
Query: 107 APRAKMNQQRTRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQ 166
+P AK +QQR RRF + E D N IT GT+
Sbjct: 101 SPVAKQSQQRHRRFLGSP----------------------------TEGFDPNSITCGTE 132
Query: 167 FMAVLSAALQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNT 226
F+ LQ +++ L + ++I SD ++ GEGEHK + + R P
Sbjct: 133 FLD----RLQGYVRRGLENFCSKEKFELIFSDTSIAGEGEHKALFFARQN------GPEE 182
Query: 227 RHCLYGLDADLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNP 286
HC Y D DL++L++ +LR+ D+
Sbjct: 183 SHCFYSPDGDLVILAMTLEFPKTFLLRK-----------------------------DHI 213
Query: 287 ADWNGVDDTPIHKKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGND 346
W ++ +I + + ++E +IP + DFVFL +GND
Sbjct: 214 QQW-----------RHLLTDISGISQ--EFEKEIP-----------IKDFVFLSCLLGND 249
Query: 347 FLPHMPTLEIR-EGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIF 405
FLP + E + L+ Y+++ + + G+ L K ++ + +E ++F
Sbjct: 250 FLPRLGMFEGKFSDTAEFLLAKYKQK--GLHIFSRKTGKFLAKNTFKILKFLGTFEKELF 307
Query: 406 QKRTRIQQAYEYNEAMKLNARRESSEELLQAPVAVADTVKLGEPGYKERYYADKFEISNP 465
+R Y E K + E + + ++ D G+ G Y ++F +
Sbjct: 308 DERC-------YFELTK-----QKEERVDRTLLSAYD----GKSGVDMDKYKEEFGLKKQ 351
Query: 466 EEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDLEITFFLG 525
+ ++ Y+ G WV YY Q W Y Y Y PF LSD+E +
Sbjct: 352 RSNQQTRE-----YLRGCLWVTLYYTQGCPDNGWSYKYFYPPF------LSDIEQEDLVH 400
Query: 526 EPFR---------PFDQLMGTLPAASSSALPEKYRNL-MTDPSSPIYKFYPPDFQIDMNG 575
EPF QL+ LP SS LP K++ + +FYP + ++D G
Sbjct: 401 EPFEQTLAHNQFSQLLQLLCVLPPHSSHLLPRKWKKYACVYQRKELAEFYPKEIEVDYEG 460
Query: 576 KRFAWQGVVKLPFIDEKLLLRQTKKLEV 603
K ++ V LP +D + R + L V
Sbjct: 461 KFRDYESVPLLPHVDVSKVRRCCETLCV 488
>gi|118373913|ref|XP_001020149.1| XRN 5'-3' exonuclease N-terminus family protein [Tetrahymena
thermophila]
gi|89301916|gb|EAR99904.1| XRN 5'-3' exonuclease N-terminus family protein [Tetrahymena
thermophila SB210]
Length = 874
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 137/487 (28%), Positives = 203/487 (41%), Gaps = 133/487 (27%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP ++ W+ +YP + V + N D LY+D+NGI
Sbjct: 1 MGVPGYFSWIHRKYPYQVRKV-------------------RRNGRKKHIDCLYIDVNGIC 41
Query: 61 HPCFHPDGK----PAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAI------------- 103
+ + + P S + +FK + D+ID I LV P+ +YL +
Sbjct: 42 YQYARDEHQYNYLLKPKSLETIFKQVIDHIDSIIELVEPQLQVYLMLANPFQPNLSGFES 101
Query: 104 -----------------------------DGVAPRAKMNQQRTRRFRAAKDAAEAEAEEE 134
DG PRAKMNQQR RRF AE
Sbjct: 102 YFCMMRFKKNQFQLKLFAIFYIQKIILKKDGPCPRAKMNQQRQRRFH-------AEMHHL 154
Query: 135 RLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQARL----------- 183
L+ E ++ G KE ET +N I PGT FM L+ L+ +I+ R+
Sbjct: 155 TLKDELKKHG--FDVKE--ETVPNNSIAPGTPFMYELNEQLRRYIETRIALSNKAMTDGE 210
Query: 184 -----NQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
+Q+ ++ + ILSD+N PGEGEHKI+ HC+ G DADL+
Sbjct: 211 ADHKEHQV-SYKKLQFILSDSNAPGEGEHKILELT--------------HCIVGADADLL 255
Query: 239 MLSLATHEIHFSILREVITLPG-----QQEKCFVCGQVGHLAAECHGKPGDNPADWNGVD 293
+LSLAT ILRE G ++E + ++ H + H + + D NG+
Sbjct: 256 LLSLATIGKRILILRENSKFKGDKTDLEKELQKLKEELSHPQLDLHKEREYDLVDINGLK 315
Query: 294 DTPIHKKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPT 353
+ K K F N V + L+Y NP ++DDFVFL F GNDFLP
Sbjct: 316 RVILDKYKKMFDNKQV--QNLKY-----NPM------SLMDDFVFLSLFAGNDFLPRQNY 362
Query: 354 LEIRE------GAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQK 407
++I+ ++ L+ Y YL+D G + +++ +F + VA E + K
Sbjct: 363 MQIKSEKGHKPNILDKLIEKYDSYLETATSYLSDRGFIKYNQIIEFFKQVATIEPKF--K 420
Query: 408 RTRIQQA 414
RI +A
Sbjct: 421 NNRIFEA 427
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 78/149 (52%), Gaps = 13/149 (8%)
Query: 452 KERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDV--CSWQWFYPYHYAPFA 509
KE Y +K +++N +E D + ++KY+EG + YY++ + SW +FYP++YAP
Sbjct: 562 KEIYLKEKLKVTNQQEYDLI----IMKYLEGFEFTLLYYFRGIEKASWNYFYPHYYAPLT 617
Query: 510 SDLKDLSD----LEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFY 565
D+ + + E+ F +PF+P+ QL+ L + + LP +++ L P F
Sbjct: 618 QDVVEFLERNPKFEVKFVKTQPFQPYKQLLAILHPDNEALLPAEFKGLFKKYLQP---FC 674
Query: 566 PPDFQIDMNGKRFAWQGVVKLPFIDEKLL 594
P ID G ++KLPFID +L
Sbjct: 675 PQILDIDKYGATMEHMQIIKLPFIDVNVL 703
>gi|145507546|ref|XP_001439728.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124406923|emb|CAK72331.1| unnamed protein product [Paramecium tetraurelia]
Length = 214
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 79/212 (37%), Positives = 119/212 (56%), Gaps = 28/212 (13%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPAF+RWL R P ++++V+E D ++ N + DNLYLDMNGII
Sbjct: 1 MGVPAFFRWLCARNPKALLEVLENS---DESCLS----------NNPDIDNLYLDMNGII 47
Query: 61 HPCFHPD--GKPAPTSYDDVFKSIFDYIDHIF-LLVRPRKLLYLAIDGVAPRAKMNQQRT 117
HPC HPD G P P +YDD+F ++F YID + ++V P++ ++ + V N
Sbjct: 48 HPCSHPDQGGIPIPVTYDDMFVNVFHYIDRLVDIMVLPQEPNQISKEVVDLEQPKNPFEF 107
Query: 118 RRFRAAKD-AAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQ 176
R+ R + E +A+ L+ + E + DSN ITPGT+FM L+ ALQ
Sbjct: 108 RKKRNVYEITGELKAQIRTLQNTYIE-----------KNFDSNQITPGTEFMQKLNIALQ 156
Query: 177 YFIQARLNQIPGWQFTKVILSDANVPGEGEHK 208
Y+I R+N P ++ +I +D+++PGEGE +
Sbjct: 157 YYIYDRMNNNPLFRNVLIIFNDSSIPGEGERQ 188
>gi|70925173|ref|XP_735320.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56508876|emb|CAH84746.1| hypothetical protein PC301213.00.0 [Plasmodium chabaudi chabaudi]
Length = 241
Score = 129 bits (324), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 61/130 (46%), Positives = 83/130 (63%), Gaps = 1/130 (0%)
Query: 452 KERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASD 511
+ RYY KF + + +D+ K+VV KY+EGL WV YY+Q W W+YPY+YAP +SD
Sbjct: 112 RARYYRSKFHLDETDNVDEFVKEVVYKYIEGLAWVLCYYFQACPMWHWYYPYYYAPLSSD 171
Query: 512 LKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQI 571
L + D+ I+F EP PF+QL+ LP+ SS LP+ YR LM SPI FYP F+
Sbjct: 172 LL-IKDISISFEEDEPLLPFEQLLCVLPSNSSHCLPKMYRELMLKNESPIVDFYPKTFKE 230
Query: 572 DMNGKRFAWQ 581
+ NGK+F +Q
Sbjct: 231 EENGKKFKYQ 240
>gi|328767906|gb|EGF77954.1| hypothetical protein BATDEDRAFT_91231 [Batrachochytrium
dendrobatidis JAM81]
Length = 126
Score = 128 bits (322), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 56/105 (53%), Positives = 76/105 (72%), Gaps = 1/105 (0%)
Query: 2 GVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGIIH 61
+PA +RWL+ +YP + +E+ PQ G + PVD + PNPNG E+DNLYLDMNGIIH
Sbjct: 7 SIPALFRWLSTKYPKVTSECIEDIPQSVGNTIV-PVDTTLPNPNGTEYDNLYLDMNGIIH 65
Query: 62 PCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGV 106
PC HP+ KPAPT+ D+++ IF YID I ++RPRK+LY+AI +
Sbjct: 66 PCCHPEDKPAPTTEDEMYIEIFKYIDRIMAIIRPRKVLYMAIGNM 110
>gi|322510814|gb|ADX06128.1| putative XRNA family 5'-3' exonuclease [Organic Lake phycodnavirus
1]
Length = 465
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 151/567 (26%), Positives = 220/567 (38%), Gaps = 147/567 (25%)
Query: 45 NGMEFDNLYLDMNGIIHPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAID 104
N + NLYLD N II+ + +G Y+ V+ SI + + L P+K ++ D
Sbjct: 21 NNIVCHNLYLDANSIIYEHLNKEG----NIYEHVYHSILN----LQKLFSPKKT-FICFD 71
Query: 105 GVAPRAKMNQQRTRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPG 164
GVAP AKM QQ+ RR+++ LL+ D+N ITPG
Sbjct: 72 GVAPLAKMVQQKQRRYKS-----------------------LLTNTILGTQSDTNKITPG 108
Query: 165 TQFMAVLSAALQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDP 224
T FM L+ +++ +++ T ILS + PGEGE+KI ++R +
Sbjct: 109 TLFMNELNT----YLRDKMD-------THTILSGTDEPGEGENKIFHFMRRE------SE 151
Query: 225 NTRHCLYGLDADLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGD 284
+ H +YGLDADLIMLSL + RE
Sbjct: 152 DEHHIIYGLDADLIMLSLLQQNYKIFLYRET----------------------------- 182
Query: 285 NPADWNGVDDTPIHKKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVG 344
K +++LN ++ ++Y Y LDI I V+++ FLCF G
Sbjct: 183 ---------------KYFEYLN-YINKKY-DYILDIDLLGKQICEIVDVEEYCFLCFLCG 225
Query: 345 NDFLPHMPTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSV-----AV 399
NDFLPH P++ IR G I ++H +++ L G ++ + K S+ A+
Sbjct: 226 NDFLPHFPSINIRNGGIEYILHHHKKTNVK----LIQNGRIIWSELYKLFYSLSKDEQAM 281
Query: 400 YEDQIF----QKRTRIQQAYEYNEAMKLNARRESSEELLQAPVAVADTVKLGEPGYKERY 455
QI +KRT I A N L EE L Y ++Y
Sbjct: 282 IAKQIMWKPTRKRTNITHADRLNH---LPLYDTDEEEYLNQ--------------YPDKY 324
Query: 456 YADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDL 515
F+ N E+I K Y+E L W YY + +Y HYAP L
Sbjct: 325 NEILFKQKNDEDICK-------NYLEMLEWTWAYYKGEDVDLYMYYRMHYAPLFKSLLHH 377
Query: 516 SDLEITFFLGEP----FRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYP----P 567
L FL P QL+ LP +P T + K +P
Sbjct: 378 FPLYGESFLKTKNTTYVNPITQLLYVLPYDDFHLIP-------TQNMDQVLKEFPYLKVK 430
Query: 568 DFQIDMNGKRFAWQGVVKLPFIDEKLL 594
+ I F W+ V L +I K L
Sbjct: 431 HYDIQYAFCHFFWEAHVDLNYIPVKAL 457
>gi|67596043|ref|XP_666049.1| pacman protein [Cryptosporidium hominis TU502]
gi|54656955|gb|EAL35817.1| pacman protein [Cryptosporidium hominis]
Length = 734
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 68/174 (39%), Positives = 100/174 (57%), Gaps = 12/174 (6%)
Query: 467 EIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDL-SDLEIT---- 521
+++++ V + Y+ GL WV YYY V SW W+YPYHYAP+ D+ +L SD++
Sbjct: 109 KLNEISDQVCIHYLRGLSWVLGYYYHGVPSWDWYYPYHYAPYVMDIVELLSDVKNENKIK 168
Query: 522 ------FFLGEPFRPFDQLMGTLPAASSS-ALPEKYRNLMTDPSSPIYKFYPPDFQIDMN 574
F LG+PF F+QLM LP S LP+++ N+M D ++P+ +FYP F+ D N
Sbjct: 169 ESLIGEFNLGKPFTQFEQLMSVLPPKSGKICLPKEFYNMMIDKNNPLSEFYPSKFKQDPN 228
Query: 575 GKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVHPQHPL 628
G + W+ V LPFID+K+LL LE + +RN + D+LY PL
Sbjct: 229 GNKQRWKWVALLPFIDQKVLLETVIPLENEMDVLSKYRNKLGCDILYSFKFSPL 282
>gi|384249414|gb|EIE22896.1| single-stranded RNA 5, partial [Coccomyxa subellipsoidea C-169]
Length = 167
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/192 (40%), Positives = 103/192 (53%), Gaps = 30/192 (15%)
Query: 1 MGVPAFYRWLADRYPLSI--VDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNG 58
MGVP + WL +YPL + E+ Q DG+ DNLY+DMN
Sbjct: 1 MGVPGLFGWLRKKYPLIVRPASAGAEEIQGDGDSFC---------------DNLYIDMNH 45
Query: 59 IIHPCFHPDGKPAP-TSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRT 117
+IH C HP + P S +++F + Y+DH+F RPR+L +A+DGVAP+AKMNQQRT
Sbjct: 46 VIHACTHPSWRCTPYLSEEEMFLDMQIYLDHLFNTARPRRLFMVAMDGVAPQAKMNQQRT 105
Query: 118 RRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQY 177
RRF +A E L KE E ++ E P + D NVITP T FMA L+ L+
Sbjct: 106 RRFFSAY--------REELSKELEIEARI---PELP-SFDGNVITPSTAFMARLAGMLRA 153
Query: 178 FIQARLNQIPGW 189
F A+L P W
Sbjct: 154 FFAAKLGADPCW 165
>gi|302853934|ref|XP_002958479.1| hypothetical protein VOLCADRAFT_108142 [Volvox carteri f.
nagariensis]
gi|300256207|gb|EFJ40479.1| hypothetical protein VOLCADRAFT_108142 [Volvox carteri f.
nagariensis]
Length = 1602
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 90/265 (33%), Positives = 131/265 (49%), Gaps = 52/265 (19%)
Query: 1 MGVPAFYRWLADRYPLSIVDVV--EEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNG 58
MGVP + +L RY + I + +ED DG A D LY+DMN
Sbjct: 1 MGVPGLFAFLKRRYGV-IARFISKKEDGSWDGAAPA---------------DALYVDMNH 44
Query: 59 IIHPCFHPDGKPAPTSYDD--VFKSIFDYIDHIFLLV----------------------- 93
IIH C H + YD+ F+ + Y+ + +
Sbjct: 45 IIHSCTHANTGSDGLPYDENAAFERMDAYLTALLEIADGGGAAAGADTAAAAAKATNSRP 104
Query: 94 -RPRKLLYLAIDGVAPRAKMNQQRTRRFRAAKDAAEAEAEEERLRKEF-EEAGKLLSAKE 151
P +LL++AIDGVAP AKMNQQRTRRF +A A + E +R E +AG ++
Sbjct: 105 PSPLRLLFVAIDGVAPIAKMNQQRTRRFLSAHVAEVTDHVEREVRAEMTSQAG---GSRT 161
Query: 152 KPETCDS----NVITPGTQFMAVLSAALQYFIQARLNQIPGWQFTKVILSDANVPGEGEH 207
P+T S N+I+ GT FM+ ++ ++ ++ ++ P + +VI+SD+ P EGEH
Sbjct: 162 IPDTSSSRFDPNIISIGTVFMSRVADRVRAMLRTKVQTDPRFTQLRVIVSDSYEPAEGEH 221
Query: 208 KIMSYIRLQRNLPGFDPNTRHCLYG 232
KIM +IR R P +DPNTRH +YG
Sbjct: 222 KIMRFIRHLRTRPEYDPNTRHIIYG 246
Score = 40.8 bits (94), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 343 VGNDFLPHMPTLEIRE--GAINLLMHVYRREFTAMGGYLTDA-GEVLLDRVEKFIQSVAV 399
GNDFLPH+P+++I + + LLM Y+ M G +T G++ R+ + +A
Sbjct: 470 AGNDFLPHVPSIDIYDLPSGLELLMVSYKELLPQMKGCITQGVGQINATRLTQLFNKLAR 529
Query: 400 YEDQIFQKRTRI 411
E+ F +R +
Sbjct: 530 DEEAAFVRRAAL 541
>gi|218199347|gb|EEC81774.1| hypothetical protein OsI_25462 [Oryza sativa Indica Group]
Length = 188
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 68/141 (48%), Positives = 88/141 (62%), Gaps = 8/141 (5%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGV AFYRWLADRYP ++ D VEE +++ G PVD+ +PNPNG+EF+NLYLDMNGII
Sbjct: 1 MGVLAFYRWLADRYPQTVSDAVEEPVELE-PGAFVPVDLCRPNPNGLEFNNLYLDMNGII 59
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
HPCFHP+G PAPT+YD+VFK + + + LVR A G A + +Q
Sbjct: 60 HPCFHPEGHPAPTTYDEVFKFLVGFSTY---LVR----FLGAFSGAALKGNFVEQDECVA 112
Query: 121 RAAKDAAEAEAEEERLRKEFE 141
R K AA+ + +L K
Sbjct: 113 RNFKQAAKLLGLDSKLEKNLH 133
>gi|16768996|gb|AAL28717.1| LD13761p [Drosophila melanogaster]
Length = 346
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 69/165 (41%), Positives = 93/165 (56%), Gaps = 9/165 (5%)
Query: 526 EPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVK 585
+PF P +QLMG PAASSS +PE + LM+DP SPI FYP DF+ID+NGK+FAWQGV
Sbjct: 7 KPFNPLEQLMGVFPAASSSHVPEPWAKLMSDPESPIIDFYPEDFKIDLNGKKFAWQGVAL 66
Query: 586 LPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVHPQHPLYQQITLYCQLYHQLPPQ 645
LPF+DEK L + LT EE+ RN + LY+ Q P Y+++ +
Sbjct: 67 LPFVDEKRLFKALVPYYDQLTGEEVKRNKRGDNYLYISNQSPHYKKVKKISE-----KDD 121
Query: 646 DRFAWEIDVNASGGMNGYIWLCERN-GLRSIIPSPVKGLPDIERN 689
+ I + GM G + E N + ++ SP+ GL DI N
Sbjct: 122 ESVCKAISFD---GMRGTLGKTELNTAISGVLKSPISGLSDINDN 163
>gi|444523968|gb|ELV13670.1| 5'-3' exoribonuclease 1 [Tupaia chinensis]
Length = 592
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 84/265 (31%), Positives = 137/265 (51%), Gaps = 14/265 (5%)
Query: 302 YQFLNIWVLREYLQYELDI--PNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREG 359
+ L++ ++REY+ YE F + ERI+DD++ + F VGNDF+PH+P L I
Sbjct: 112 FHLLHLSLMREYIDYEFSALKEKITFKYDIERIIDDWILMGFLVGNDFIPHLPHLHINHD 171
Query: 360 AINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYEYNE 419
A+ LL Y +GGY+ ++G + L R EK++ ++ ++ + F + + +E
Sbjct: 172 ALPLLYGTYITILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSEVFVDLKWFESKV 231
Query: 420 AMK-LNARRESSEELLQAPVAVADTVKLGEPGYKERYYADKFE---ISNPEEIDKVKKDV 475
K LN + E + G+ DK E +++ + ++ +D
Sbjct: 232 GNKYLNEAAGVAAEEAKN--YKEKKKLKGQENSLCWAALDKSEGEVVTSKDNLEDEAEDD 289
Query: 476 VLKYVEGLCWVCRYYYQ----DVCSWQWFYPYHYAPFASDLKDLSDLEITFFLGEPFRPF 531
L E + YY D+ S FYPYHYAPF SD++++S LEI F LG+PF+PF
Sbjct: 290 DLFETEFRQYKRTYYMTKMGVDIVS--EFYPYHYAPFLSDIRNISTLEIHFELGKPFKPF 347
Query: 532 DQLMGTLPAASSSALPEKYRNLMTD 556
+QL+ LPAAS + LP Y+ ++
Sbjct: 348 EQLLAVLPAASKNLLPTCYQQRKSN 372
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 60/125 (48%), Positives = 78/125 (62%), Gaps = 22/125 (17%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP FYRW+++RYP + +VV+E Q+ EF NLYLDMNGII
Sbjct: 1 MGVPKFYRWISERYP-CLSEVVKEH-QIP------------------EFANLYLDMNGII 40
Query: 61 HPCFHP--DGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C HP D S D +F IF Y++ +F +++PRK+ ++A+DGVAPRAKMNQQR R
Sbjct: 41 HQCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGR 100
Query: 119 RFRAA 123
RFR
Sbjct: 101 RFRVC 105
>gi|237831033|ref|XP_002364814.1| XRN 5'-3' exonuclease N-terminus domain-containing protein
[Toxoplasma gondii ME49]
gi|211962478|gb|EEA97673.1| XRN 5'-3' exonuclease N-terminus domain-containing protein
[Toxoplasma gondii ME49]
gi|221507695|gb|EEE33299.1| hypothetical protein TGVEG_101580 [Toxoplasma gondii VEG]
Length = 2089
Score = 123 bits (308), Expect = 4e-25, Method: Composition-based stats.
Identities = 91/323 (28%), Positives = 145/323 (44%), Gaps = 64/323 (19%)
Query: 324 PFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHVYRREFTAMGGYLTDAG 383
P ++ ER++DDFVFL FFVGNDFLP +P L+I +G + L+ Y A+GGYLT
Sbjct: 1293 PRLLDPERLIDDFVFLSFFVGNDFLPGLPHLDIFQGGLATLVRSYTAALPALGGYLTLKT 1352
Query: 384 EVLLDRVEKFIQSVAVYEDQIFQKR---------TRIQQAYEYNEA-------MKLNARR 427
++ L+R+ + Q +A+YE FQ+ +R Q + A + A+R
Sbjct: 1353 KINLERLRRLFQILALYEGPHFQRHLDPGLLRSISRAQAGLSGHGADGTRHDDLVEEAKR 1412
Query: 428 ESSEELLQAPVAVADTVKLGEPGYKERYYADKFEI--------------------SNPEE 467
S L + A V +P + YY KF + ++P
Sbjct: 1413 RISPLLSRVSRQPAQEVDCSDP-HAVLYYTSKFPLATLLGRGDSRAKSGASPACPTSPSA 1471
Query: 468 IDKV---------------KKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDL 512
V + + L YV GL ++ RYY+ W WF+P+ +AP SDL
Sbjct: 1472 APLVPSLARGPWAVPFANFRAQLALDYVTGLFFLLRYYHTSKPCWSWFFPHEFAPLCSDL 1531
Query: 513 KDLSDLEITFFLGEP-------FRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFY 565
L + + P F P+ QL+ LPA+S++ LP YR+L + + +
Sbjct: 1532 ARLDPQALARAVALPSLREDFMFSPYAQLLAVLPASSAALLPRIYRHL--PQTRDVADMF 1589
Query: 566 PPDFQID---MNGKRFAWQGVVK 585
P F +D + RF ++ +++
Sbjct: 1590 PDTFPVDSHPFHALRFDFKNILE 1612
Score = 87.8 bits (216), Expect = 2e-14, Method: Composition-based stats.
Identities = 80/236 (33%), Positives = 109/236 (46%), Gaps = 52/236 (22%)
Query: 33 VARPVDVSKPNPNGMEFDNLYLDMNGIIHPCFH---PDGKPAPTSYDD--VFKSIFDYID 87
VARPV +++ + D L+LD N IIH C H P P P + + + + Y+
Sbjct: 640 VARPVSLAQLRSR-LPIDALFLDFNAIIHLCSHGHLPSTLPPPLMHCQPLLLQRVCAYLH 698
Query: 88 HIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF--------------------------- 120
+ LVRPRKLL L +DGV P AK+NQQR+RRF
Sbjct: 699 RLVSLVRPRKLLVLTLDGVPPLAKVNQQRSRRFRQSRDDRLAVRLEDEEDEDEGDGRQGC 758
Query: 121 -RAAK------DAAEAEAEEER-----------LRKEFEEAGKLLSAKEKPETCDSNVIT 162
RAA+ DA E R +RK EA L A P D+N I+
Sbjct: 759 RRAAQTPTLETDATLNAQETLRAEGREEGDGEGVRKLCGEASSDLFAAVAPPYLDTNCIS 818
Query: 163 PGTQFMAVLSAALQYFIQARLNQIPGWQFTK-VILSDANVPGEGEHKIMSYIRLQR 217
PGT FM + L+ FI +L P W+ + V L+ +VPGEGEHK++ +R +
Sbjct: 819 PGTTFMTLCEQTLKKFIVHKLRTSPLWRNLQCVCLNTHSVPGEGEHKLLHLLRFGK 874
Score = 40.4 bits (93), Expect = 2.9, Method: Composition-based stats.
Identities = 21/39 (53%), Positives = 26/39 (66%), Gaps = 5/39 (12%)
Query: 216 QRNLPGFDPNTRHCLYGLDADLIMLSLATHEIHFSILRE 254
Q LPG R CLYG+DADL+ML+L+ H + ILRE
Sbjct: 1098 QVALPG-----RICLYGMDADLLMLALSVHRPNLLILRE 1131
>gi|340055310|emb|CCC49623.1| putative 5'-3' exonuclease XRNC [Trypanosoma vivax Y486]
Length = 871
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 116/423 (27%), Positives = 171/423 (40%), Gaps = 111/423 (26%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP WL R+ + P+ + + D LY+D+NG++
Sbjct: 1 MGVPLLLTWLKRRFASCFL----------------------PSNSSPDTDCLYIDVNGLV 38
Query: 61 HPCFHPDGKPAPTSYDDVFKSI----FDYIDHIFL-LVRPRKLLYLAIDGVAPRAKMNQQ 115
+ ++ D+ +I FD +D I L LV+PR L+YLA+DG++P K+ QQ
Sbjct: 39 YQAAALVTSGEGSTEGDIGTAITYRLFDLLDDIILRLVQPRSLVYLAVDGISPMGKLAQQ 98
Query: 116 RTRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAAL 175
R+RR R D S + DSN IT GT FM+ L+ AL
Sbjct: 99 RSRRRRRRHD------------------NNFPSNHNRNVEWDSNSITVGTPFMSTLTYAL 140
Query: 176 QYFIQARLNQI----------------PG---WQFTKVILSDANVPGEGEHKIMSYIRLQ 216
++ +R +I PG ++ D PGEGE KI IR
Sbjct: 141 HFYCSSRAERINVERLRQYRSTAGGNAPGDTVPVPVTFVVDDVWRPGEGESKIADAIRRF 200
Query: 217 RNLPGFDPNTRHCLYGLDADLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHL-- 274
R+ P ++PNT H + D D+ + SL HE +LR V + V H
Sbjct: 201 RSQPSYNPNTSHVICSSDTDMTVCSLILHEPRMHVLRYV----------YAAENVSHCDG 250
Query: 275 AAECHGKPGDNPADWNGVDDTPIHKKKYQFLNIWVLREYLQYELDIPNPPFPIN------ 328
+ H GD+ A F +I+ RE L+ +L +P P N
Sbjct: 251 SGSRHNHTGDSWAS--------------TFFSIFAFREELRIKLRLP----PCNDDAEMS 292
Query: 329 ----------FERIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHVYRREFTAMGGY 378
FER + D VF+ GNDFLP + I EG ++ L+ + +F G
Sbjct: 293 AEELEQRHQRFERALHDVVFVLQLFGNDFLPSL-GCRIEEGFLDNLLDMLATDFITRGRS 351
Query: 379 LTD 381
+ D
Sbjct: 352 IVD 354
>gi|221487913|gb|EEE26145.1| XRN 5'-3' exonuclease N-terminus domain-containing protein, putative
[Toxoplasma gondii GT1]
Length = 2089
Score = 122 bits (307), Expect = 5e-25, Method: Composition-based stats.
Identities = 91/323 (28%), Positives = 145/323 (44%), Gaps = 64/323 (19%)
Query: 324 PFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHVYRREFTAMGGYLTDAG 383
P ++ ER++DDFVFL FFVGNDFLP +P L+I +G + L+ Y A+GGYLT
Sbjct: 1292 PRLLDPERLIDDFVFLSFFVGNDFLPGLPHLDIFQGGLATLVRSYTAALPALGGYLTLKT 1351
Query: 384 EVLLDRVEKFIQSVAVYEDQIFQKR---------TRIQQAYEYNEA-------MKLNARR 427
++ L+R+ + Q +A+YE FQ+ +R Q + A + A+R
Sbjct: 1352 KINLERLRRLFQILALYEGPHFQRHLDPGLLRSISRAQAGLSGHGAEGTRHDDLVEEAKR 1411
Query: 428 ESSEELLQAPVAVADTVKLGEPGYKERYYADKFEI--------------------SNPEE 467
S L + A V +P + YY KF + ++P
Sbjct: 1412 RISPLLSRVSRQPAQEVDCSDP-HAVLYYTSKFPLATLLGRGDSRAKSGASPACPTSPSA 1470
Query: 468 IDKV---------------KKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDL 512
V + + L YV GL ++ RYY+ W WF+P+ +AP SDL
Sbjct: 1471 APLVPSLARGPWAVPFANFRAQLALDYVTGLFFLLRYYHTSKPCWSWFFPHEFAPLCSDL 1530
Query: 513 KDLSDLEITFFLGEP-------FRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFY 565
L + + P F P+ QL+ LPA+S++ LP YR+L + + +
Sbjct: 1531 ARLDPQALARAVALPSLREDFMFSPYAQLLAVLPASSAALLPRIYRHL--PQTRDVADMF 1588
Query: 566 PPDFQID---MNGKRFAWQGVVK 585
P F +D + RF ++ +++
Sbjct: 1589 PDTFPVDSHPFHALRFDFKNILE 1611
Score = 87.4 bits (215), Expect = 2e-14, Method: Composition-based stats.
Identities = 80/236 (33%), Positives = 109/236 (46%), Gaps = 52/236 (22%)
Query: 33 VARPVDVSKPNPNGMEFDNLYLDMNGIIHPCFH---PDGKPAPTSYDD--VFKSIFDYID 87
VARPV +++ + D L+LD N IIH C H P P P + + + + Y+
Sbjct: 639 VARPVSLAQLRSR-LPIDALFLDFNAIIHLCSHGHLPSTLPPPLMHCQPLLLQRVCAYLH 697
Query: 88 HIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF--------------------------- 120
+ LVRPRKLL L +DGV P AK+NQQR+RRF
Sbjct: 698 RLVSLVRPRKLLVLTLDGVPPLAKVNQQRSRRFRQSRDDRLAVRLEDEEDEDEGDGRQGC 757
Query: 121 -RAAK------DAAEAEAEEER-----------LRKEFEEAGKLLSAKEKPETCDSNVIT 162
RAA+ DA E R +RK EA L A P D+N I+
Sbjct: 758 RRAAQTPTLETDATLNAQETLRAEGREEGDGEGVRKLCGEASSDLFAAVAPPYLDTNCIS 817
Query: 163 PGTQFMAVLSAALQYFIQARLNQIPGWQFTK-VILSDANVPGEGEHKIMSYIRLQR 217
PGT FM + L+ FI +L P W+ + V L+ +VPGEGEHK++ +R +
Sbjct: 818 PGTTFMTLCEQTLKKFIVHKLRTSPLWRNLQCVCLNTHSVPGEGEHKLLHLLRFGK 873
Score = 40.4 bits (93), Expect = 3.2, Method: Composition-based stats.
Identities = 21/39 (53%), Positives = 26/39 (66%), Gaps = 5/39 (12%)
Query: 216 QRNLPGFDPNTRHCLYGLDADLIMLSLATHEIHFSILRE 254
Q LPG R CLYG+DADL+ML+L+ H + ILRE
Sbjct: 1097 QVALPG-----RICLYGMDADLLMLALSVHRPNLLILRE 1130
>gi|322511261|gb|ADX06572.1| putative XRN family 5'-3' exonuclease [Organic Lake phycodnavirus]
Length = 467
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 142/548 (25%), Positives = 225/548 (41%), Gaps = 125/548 (22%)
Query: 50 DNLYLDMNGIIHPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPR 109
DNLYLD N II+ +P Y+ ++++I I+ +P++ + DGVAP
Sbjct: 26 DNLYLDANSIIYDQIQKGDEP----YEHIYQAIMTIINKF----QPKQTR-ICFDGVAPL 76
Query: 110 AKMNQQRTRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMA 169
AKM QQ+ RR+++ K+L+ + + ++N ITPGT FM
Sbjct: 77 AKMVQQKQRRYKS------------------HLTKKILN---QSSSFNTNCITPGTLFMN 115
Query: 170 VLSAALQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHC 229
L+ +++ +L+ T ++LS ++ PGEGE+KI +IR +N H
Sbjct: 116 GLNV----YLKEKLDND-----TTIVLSGSDEPGEGEYKIFQHIRTCKN-----NQENHI 161
Query: 230 LYGLDADLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADW 289
+YGLDADLIMLSL + LP Q +L E
Sbjct: 162 IYGLDADLIMLSL-------------LQLPKQ----------IYLYRE------------ 186
Query: 290 NGVDDTPIHKKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLP 349
K +++LN ++E Y LD+ I ++++ FLCFF GNDFLP
Sbjct: 187 ---------TKYFKYLN--YIQENQDYLLDVSLLGEQICQSMSIENYCFLCFFCGNDFLP 235
Query: 350 HMPTLEIREGAIN-LLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKR 408
H P++ IR I+ LL H + +L +R+ K Q+
Sbjct: 236 HFPSINIRNHGIDHLLEHALSLNLIQNHKIVWSELYILFERLSK-------------QEH 282
Query: 409 TRIQQAYEYNEAMKLNARRESSEELLQ-APVAVADTVKLGEPGYKERYYADKFEISNPEE 467
RI Q ++ K A + E+ L P+ D + + ++Y F N +
Sbjct: 283 ERIAQQIQWKTTRK--AHNITHEDRLNYLPLYDHDEEDYLK-AHPDKYNMILFRQHNDQS 339
Query: 468 IDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDLEITFFLGEP 527
I K +Y+E L W YY + +YP YAP L + ++ L P
Sbjct: 340 ICK-------QYLEMLEWTWDYYIGNPIDLYKYYPMGYAPLFQSLLNEISIDDDERLLSP 392
Query: 528 FR------PFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQ 581
+ P QL+ LP + +P +++ P K D+ I F W+
Sbjct: 393 NKNTTFVNPITQLLYVLPYENYDLIPISKESII--KQFPYLK--TTDYNIQYAFCHFFWE 448
Query: 582 GVVKLPFI 589
V +I
Sbjct: 449 SHVDFGYI 456
>gi|74184155|dbj|BAE37081.1| unnamed protein product [Mus musculus]
Length = 109
Score = 119 bits (298), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 64/128 (50%), Positives = 84/128 (65%), Gaps = 22/128 (17%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP FYRW+++RYP + +VV+E Q+ EFDNLYLDMNGII
Sbjct: 1 MGVPKFYRWISERYP-CLSEVVKEH-QIP------------------EFDNLYLDMNGII 40
Query: 61 HPCFHP--DGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C HP D S D +F IF Y++ +F +++PRK+ ++A+DGVAPRAKMNQQR R
Sbjct: 41 HQCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGR 100
Query: 119 RFRAAKDA 126
RFR+AK+A
Sbjct: 101 RFRSAKEA 108
>gi|253744666|gb|EET00835.1| 5'-3' exoribonuclease 2 [Giardia intestinalis ATCC 50581]
Length = 1956
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/283 (31%), Positives = 128/283 (45%), Gaps = 50/283 (17%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGV +RW+ +RYP +I V+R DNLY+D N +I
Sbjct: 1 MGVARLFRWIYERYPFAIT-------TPGASFVSR-------------IDNLYIDFNALI 40
Query: 61 HPCFHPDGK-PAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRR 119
H D P + +F I DYI + V+PRK +++A DGVAP AK QQR RR
Sbjct: 41 HESIRKDSYIPFKFTEAMLFGEIADYIQVLVSTVQPRKRIFIATDGVAPDAKTKQQRVRR 100
Query: 120 FRAAKDAAEAEAEEERLRKE---FEEAGKLLSA---------KEKPETCDSNVITPGTQF 167
+ + + +E++ EA L S + P I+PGT F
Sbjct: 101 YMGSYQKEGSTLYKEKIAGTANVLSEAELLASRHIANGNSDDRSLPPQNVKTAISPGTLF 160
Query: 168 MAVLSAALQYFIQARLN-QIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLP-----G 221
M L + L F+ ++ + PGW V +S ++ GEGEHKIM+ I+ + L G
Sbjct: 161 MDRLHSFLIAFVAKNVDSEAPGWVHPSVTISGWDMCGEGEHKIMTEIKRIKQLEEQAAIG 220
Query: 222 FDPNTR-----------HCLYGLDADLIMLSLATHEIHFSILR 253
D + + HC+ GLDAD+I+L L H + +LR
Sbjct: 221 VDYSEKSFSEFFPYHESHCICGLDADIILLGLGVHVQNVYLLR 263
Score = 43.1 bits (100), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 27/38 (71%)
Query: 332 IVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHVYR 369
++ DF+ L FVGNDFLP +P + I+ G+++ + +YR
Sbjct: 369 LIVDFIILTLFVGNDFLPEVPGMLIKNGSLDNCIAIYR 406
>gi|401412103|ref|XP_003885499.1| putative XRN 5'-3' exonuclease N-terminus domain-containing protein
[Neospora caninum Liverpool]
gi|325119918|emb|CBZ55471.1| putative XRN 5'-3' exonuclease N-terminus domain-containing protein
[Neospora caninum Liverpool]
Length = 1754
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 89/313 (28%), Positives = 137/313 (43%), Gaps = 70/313 (22%)
Query: 327 INFERIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVL 386
++ ER++DDFVFL FFVGNDFLP +P L+I +G + L+ Y A+GGYLT ++
Sbjct: 979 LDPERLIDDFVFLSFFVGNDFLPGLPHLDIFQGGLATLVRTYTAALPALGGYLTLKTKIN 1038
Query: 387 LDRVEKFIQSVAVYE---------DQIFQKRTRIQQAYE--YNEAMKLN-----ARRESS 430
L+R+ + Q +A+YE + Q R Q Y E + + A+R
Sbjct: 1039 LERLRRLFQILALYEGPHFESHIDSALLQSIARAQAGLSCGYREDARRDDLLDEAKRRIR 1098
Query: 431 EELLQAPVAV----ADTVKLGEPGYKERYYADKFEISN----PEEIDKVKKD-------- 474
L AP A + +P + YY KF ++ PE + +D
Sbjct: 1099 PLLANAPRAPPRENGREIDCTDP-HAVLYYTSKFPLATLLGRPE--TRANRDGPSAACPA 1155
Query: 475 --------------------------VVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPF 508
+ L YV GL ++ RYY+ W WF+P+ +AP
Sbjct: 1156 SPSRSLFASNLSRSPWAVPFADFRARLALDYVTGLFFLLRYYHTSKPCWSWFFPHEFAPL 1215
Query: 509 ASDLKDLSDLEITFFLGEP-------FRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPI 561
SDL L + + P F P+ QL+ LPA+S++ LP YR+L + +
Sbjct: 1216 CSDLARLDPAALARSVALPSVREDFKFSPYAQLLAVLPASSAALLPRVYRHLPRE--REL 1273
Query: 562 YKFYPPDFQIDMN 574
+P F +D +
Sbjct: 1274 ADMFPDGFPVDSH 1286
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 89/207 (42%), Gaps = 43/207 (20%)
Query: 33 VARPVDVSKPNPNGMEFDNLYLDMNGIIHPCFH---PDGKPAPTSY--DDVFKSIFDYID 87
+ RPV +S+ + + D L+LD N IIH C H P P P + + + + Y+
Sbjct: 409 LGRPVPLSRLHAR-LPIDALFLDFNAIIHLCSHGHLPSTLPPPLARFLPLLLQRVCGYLH 467
Query: 88 HIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRFRAAKDAAEAEAEEERLRKEFEEAGKLL 147
+ LVRPRKLL L +DGV P AK+ QQR+RRFR ++D A RL E EE GK
Sbjct: 468 RLVSLVRPRKLLVLTLDGVPPLAKVTQQRSRRFRQSRDDRLAV----RLEDEEEEDGKRC 523
Query: 148 SAKEKPETCDSNVITPGTQFMAVLSAALQYFIQARLNQIPGWQFTKVILSDANVPGEGEH 207
PG + LS Y I V GEGEH
Sbjct: 524 GLARSACCLPRGAEGPGERTSCFLSF---YHI---------------------VKGEGEH 559
Query: 208 KIMSYIR---------LQRNLPGFDPN 225
K++ +R L LPG P
Sbjct: 560 KLLHLLRFGTWPEAKSLPHTLPGAGPT 586
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 27/42 (64%), Gaps = 5/42 (11%)
Query: 216 QRNLPGFDPNTRHCLYGLDADLIMLSLATHEIHFSILREVIT 257
Q LPG R CLYG+DADL+ML+L+ H + ILRE T
Sbjct: 783 QVALPG-----RVCLYGMDADLLMLTLSLHRSNLLILRERQT 819
>gi|307109532|gb|EFN57770.1| hypothetical protein CHLNCDRAFT_143098, partial [Chlorella
variabilis]
Length = 234
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 93/288 (32%), Positives = 121/288 (42%), Gaps = 107/288 (37%)
Query: 3 VPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDM------ 56
+P FYRWL++RYPL V+ G A V + DNLYLDM
Sbjct: 4 IPKFYRWLSERYPL-----------VNQPGGATVVPI---------IDNLYLDMVSEAAG 43
Query: 57 -------------------------------NGIIHPCFHPDGKPAPTSYDDVFKSIFDY 85
NGIIH C H + + +++ IF Y
Sbjct: 44 GSMGAAKGSSSSSSARRAHAACRCLRQGGAPNGIIHNCTHGNNPDVRLTEEEMILKIFTY 103
Query: 86 IDHIFLLVRPR----KLLYLAIDGVAPRAKMNQQRTRRFRAAKDAAEA-EAEEERLRKEF 140
+D +F +V+P+ KLL++AIDG APRAKMNQQR RRF++A++A EA EA R
Sbjct: 104 LDKLFHIVKPQAGGGKLLFMAIDGSAPRAKMNQQRARRFKSAREAQEAMEAAVRRGEPVP 163
Query: 141 EEAGKLLSAKEKPETCDSNVITPGTQ--------FMAVLSAALQYFIQARLNQIPGWQFT 192
E + DSN ITPGT+ + +L A R +P W
Sbjct: 164 EPDARF----------DSNCITPGTREGTLPRCGTLCMLGDAALRCAALRCAALPCW--- 210
Query: 193 KVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
+ P + PN RHCLYGLDADLIML
Sbjct: 211 ------------------------KRRPDYAPNMRHCLYGLDADLIML 234
>gi|238613508|ref|XP_002398460.1| hypothetical protein MPER_00943 [Moniliophthora perniciosa FA553]
gi|215475037|gb|EEB99390.1| hypothetical protein MPER_00943 [Moniliophthora perniciosa FA553]
Length = 98
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 50/84 (59%), Positives = 65/84 (77%)
Query: 29 DGEGVARPVDVSKPNPNGMEFDNLYLDMNGIIHPCFHPDGKPAPTSYDDVFKSIFDYIDH 88
+ E V P +++ PNPNG EFD LYLDMNGI+HPC HP+GKPAP + +D+ +F Y +
Sbjct: 15 NNELVTIPTNMADPNPNGTEFDCLYLDMNGIVHPCTHPEGKPAPETEEDMMVEVFKYTER 74
Query: 89 IFLLVRPRKLLYLAIDGVAPRAKM 112
+ +VRPRKLL++AIDGVAPRAKM
Sbjct: 75 VVNMVRPRKLLFMAIDGVAPRAKM 98
>gi|296085877|emb|CBI31201.3| unnamed protein product [Vitis vinifera]
Length = 85
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 56/80 (70%), Positives = 65/80 (81%), Gaps = 1/80 (1%)
Query: 299 KKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGND-FLPHMPTLEIR 357
KK Y+FLNIW LREYL+YE+ IPN PF I+FE +VDDF+F+CFFVGND FLP M L I
Sbjct: 3 KKPYRFLNIWTLREYLEYEMRIPNLPFGIDFEHLVDDFIFMCFFVGNDFFLPRMLALVIC 62
Query: 358 EGAINLLMHVYRREFTAMGG 377
EGAINLLM VY++E AMGG
Sbjct: 63 EGAINLLMAVYKKELKAMGG 82
>gi|196007658|ref|XP_002113695.1| hypothetical protein TRIADDRAFT_26537 [Trichoplax adhaerens]
gi|190584099|gb|EDV24169.1| hypothetical protein TRIADDRAFT_26537 [Trichoplax adhaerens]
Length = 142
Score = 115 bits (289), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 60/123 (48%), Positives = 81/123 (65%), Gaps = 22/123 (17%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP F+RW+++RYP + +++E Q+ EFDNLYLDMNGII
Sbjct: 1 MGVPKFFRWISERYP-CLSQIIKEH-QIP------------------EFDNLYLDMNGII 40
Query: 61 HPCFHPDGKPAP--TSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
H C HPD A S + +F IF YI+ +F +++PRK+L++AIDG+APRAKMNQQR+R
Sbjct: 41 HNCSHPDDANAHFRISEEKIFLDIFSYIEVLFRIIKPRKVLFMAIDGIAPRAKMNQQRSR 100
Query: 119 RFR 121
RFR
Sbjct: 101 RFR 103
>gi|147771604|emb|CAN69283.1| hypothetical protein VITISV_028678 [Vitis vinifera]
Length = 79
Score = 115 bits (288), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 54/69 (78%), Positives = 60/69 (86%), Gaps = 4/69 (5%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPAFYRWLADRY L+++DVVEE+P DG + DVS+PNPNGMEFDNLYLDMNGII
Sbjct: 1 MGVPAFYRWLADRYHLAVMDVVEEEPSEDGAEI----DVSRPNPNGMEFDNLYLDMNGII 56
Query: 61 HPCFHPDGK 69
HPCFHPDGK
Sbjct: 57 HPCFHPDGK 65
>gi|68067452|ref|XP_675691.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56495020|emb|CAH99326.1| hypothetical protein PB000181.03.0 [Plasmodium berghei]
Length = 167
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/142 (43%), Positives = 83/142 (58%), Gaps = 21/142 (14%)
Query: 1 MGVPAFYRWLADRYP--------LSIVDVVEEDPQVDGEGVARPV------------DVS 40
MGVP FY+WL RYP DV +++ G V +
Sbjct: 1 MGVPTFYKWLVTRYPKIAKAVYETRDNDVYIRRARINENGEFYKVCDLGAYVNNTDENHC 60
Query: 41 KPNPNGMEFDNLYLDMNGIIHPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLY 100
N NG FDN+YLDMNGIIH C H DG + +++F +IF YI+ +F ++ P+KLLY
Sbjct: 61 SDNVNGY-FDNMYLDMNGIIHLCSHGDGSKKVKTDEEIFLNIFLYIERLFDIIEPQKLLY 119
Query: 101 LAIDGVAPRAKMNQQRTRRFRA 122
+AIDGVAP+AKMNQQR+RRF++
Sbjct: 120 MAIDGVAPKAKMNQQRSRRFKS 141
>gi|440796943|gb|ELR18040.1| 5'3' exoribonuclease, putative [Acanthamoeba castellanii str. Neff]
Length = 1117
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 108/402 (26%), Positives = 169/402 (42%), Gaps = 95/402 (23%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MG+ F +WL YP + V + P+ G P V FD++Y+D+NG I
Sbjct: 1 MGIAGFQKWLEKHYPHCFIPV-PDAPRRPAPGERAPPAVKD------YFDHIYVDLNGYI 53
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
H G+ A + + +F +F +D +F + R+ ++LAIDG A AK+ QR RR
Sbjct: 54 HTV----GRRA-ANEEQLFTLLFRELDGLFKVCVARQSIFLAIDGPASAAKLITQRKRRL 108
Query: 121 RAA-----KDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNV--ITPGTQFMAVLSA 173
AA + A+A+ + + E + +S K + + N+ +T GT FM L
Sbjct: 109 GAASKQDRQAKAKAQPQPQVAESEAQTGAPAVSKKRVKKKGEFNLLQVTAGTPFMYRLKN 168
Query: 174 ALQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNL---PGFDPNTR--- 227
AL ++ +RL P + FT++ +S +VPGEGE KIM +I N P +P R
Sbjct: 169 ALCFWACSRLQSDPKYHFTRIYISGPDVPGEGELKIMEFIVSHANADSSPPPNPQERVFA 228
Query: 228 -------------------HCLYGLDADLIMLSLATHEIHFSILREVITLPGQQEKCFVC 268
H + G DADLI+L L+ S+L+ V L Q+
Sbjct: 229 YQTGFADQERNAEKFRRDSHLIVGTDADLILLGLS------SMLQNVFILNTQR------ 276
Query: 269 GQVGHLAAECHGKPGDNPADWNGVDDTPIHKKKYQFLNIWVLREYLQYELDIPNPPFPIN 328
GQ L +IW L++ PF +
Sbjct: 277 GQSSKL-----------------------------LFSIWEFCRSLEHSF-----PFRGH 302
Query: 329 FERIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHVYRR 370
DFV + GND+LP ++R +++ L Y++
Sbjct: 303 CNMTRLDFVLISLLQGNDYLP-----KLRGASLDRLWARYKK 339
>gi|123493433|ref|XP_001326289.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121909201|gb|EAY14066.1| hypothetical protein TVAG_478910 [Trichomonas vaginalis G3]
Length = 868
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 121/507 (23%), Positives = 210/507 (41%), Gaps = 116/507 (22%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MG+ F L +RYPL + + E + P N + D L + GI
Sbjct: 1 MGIYTFRGQLTNRYPLILKSLSE---------------IPYPKYNCLFIDASLLIVKGI- 44
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
G +V + +F+ I H LV+P L+++A DG P + Q R
Sbjct: 45 -----RSGVQTELRTANV-RQLFNNIVH---LVQPSDLIFIAFDG--PFSNAKQYTVLRR 93
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQ 180
R A + EA + + L+ +I+
Sbjct: 94 RYADKSMPIEA-----------------------------------WNQIFEDDLKRWIE 118
Query: 181 ARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
+N WQ +VI S + VPGE E KI ++R + + P +DPN RHC+ D+DLI++
Sbjct: 119 ELINFDEYWQKPRVIFSGSKVPGEAETKIFDFLRQEIHKPEWDPNKRHCIVTNDSDLILM 178
Query: 241 SLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIHKK 300
SL +H + I ++ Q K + G L G VD
Sbjct: 179 SLRSHIPNIDIYNDIY-----QNKI----KNGMLEPYISFSAG-------SVD------- 215
Query: 301 KYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGA 360
+NI +LREYL ++ F IN ERI DDFV L ND+ P + ++ + +
Sbjct: 216 ---VININLLREYLFHD-------FGINDERIFDDFVLLVNLYSNDYRPKFDS-DLSKIS 264
Query: 361 INLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYEYNEA 420
I+ L+ Y+ E + + ++T+ V L++++ FI F +R +Q+ +
Sbjct: 265 IDDLIETYKSEPSCI--FITEKDNVNLEKLKIFIMK--------FMERNYLQEIQNQQQN 314
Query: 421 MKLNARRESSEELLQAPVAVADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYV 480
+ +++ ++ + + +K K+ Y++ + + PEE +K+ ++
Sbjct: 315 KTSENQNDNTTKIEENHLDFESYIK----SKKDEYFSKR--KTTPEETEKISHCLI---- 364
Query: 481 EGLCWVCRYYYQDVCSWQWFYPYHYAP 507
+ + + + Y + SW W Y YH+AP
Sbjct: 365 DSILFTYKEYSSGIPSWSWIYKYHFAP 391
>gi|71665017|ref|XP_819483.1| 5'-3' exonuclease XRNC [Trypanosoma cruzi strain CL Brener]
gi|70884786|gb|EAN97632.1| 5'-3' exonuclease XRNC, putative [Trypanosoma cruzi]
Length = 880
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 112/415 (26%), Positives = 165/415 (39%), Gaps = 96/415 (23%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP WL R+ + S P D LY+D+NG++
Sbjct: 1 MGVPLLLTWLKRRFAPCFLS-------------------SSSCPAA---DCLYIDVNGLV 38
Query: 61 HPCFHPDGKPAPTSYD---DVFKSIFDYIDHIFL-LVRPRKLLYLAIDGVAPRAKMNQQR 116
+ ++ D + + +FD +D I L LVRPR L+YLA+DG++P K+ QQR
Sbjct: 39 YQAAALATASEASAVDIDAAILRKLFDILDDIVLRLVRPRFLVYLAVDGISPMGKLAQQR 98
Query: 117 TRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQ 176
+RR R + + E DSN I+ GT FM+ L+ AL
Sbjct: 99 SRRRRRSGGGSRGRNAVE---------------------WDSNSISVGTPFMSRLTEALH 137
Query: 177 YFIQARLNQIPGWQF---------------------TKVILSDANVPGEGEHKIMSYIRL 215
++ +R +I G + I+ D PGEGE KI IR
Sbjct: 138 FYCASRAERINGERLRDELQQVARGNTTGGDVPVTPITFIVDDVWRPGEGESKIADAIRR 197
Query: 216 QRNLPGFDPNTRHCLYGLDADLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLA 275
R+ +DPNT H + D D+ + SL HE +LR + C H
Sbjct: 198 FRSQSTYDPNTSHVICSSDTDVTVCSLILHEPRIHVLR------------YECSPSHHSG 245
Query: 276 AECHGKPGDNPADWNGVDDTPIHKKKYQFLNIWVLREYLQYELDIPNPPFPI-------- 327
G GD+ + N V D F +I RE L+ +L +
Sbjct: 246 GASRG--GDSGSWRNQVGDA----WASTFFSIHAFREELRNKLRLQTSRKDSAEEAERRN 299
Query: 328 -NFERIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHVYRREFTAMGGYLTD 381
FER + D VF+ GNDFLP + I EG ++ L+ + +F + + D
Sbjct: 300 RQFERALHDVVFVLLLFGNDFLPSV-GCRIEEGFLDDLLELLATDFISRDRSIID 353
>gi|260944870|ref|XP_002616733.1| hypothetical protein CLUG_03974 [Clavispora lusitaniae ATCC 42720]
gi|238850382|gb|EEQ39846.1| hypothetical protein CLUG_03974 [Clavispora lusitaniae ATCC 42720]
Length = 483
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 55/126 (43%), Positives = 75/126 (59%)
Query: 512 LKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQI 571
+K + E LGEPF P++QLM LPAAS LPE +R+LM+ P S I FYP FQI
Sbjct: 75 VKSWARKESNSILGEPFNPYEQLMAVLPAASGHTLPEVFRSLMSHPDSEIIDFYPETFQI 134
Query: 572 DMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVHPQHPLYQQ 631
DMNG + +WQG+ LPFIDEK LL + LT++E RN+ L++ + Y++
Sbjct: 135 DMNGAKMSWQGIALLPFIDEKRLLTAVRAKYSLLTDDERERNTNKKAQLFISSGNANYKK 194
Query: 632 ITLYCQ 637
C+
Sbjct: 195 FIQACE 200
>gi|342182575|emb|CCC92054.1| putative exoribonuclease 2 [Trypanosoma congolense IL3000]
Length = 867
Score = 112 bits (281), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 110/419 (26%), Positives = 164/419 (39%), Gaps = 104/419 (24%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP WL R+ + P+ + D LY+D+NG++
Sbjct: 1 MGVPLLLTWLRRRFSSCFL----------------------PSNTVLSTDCLYIDVNGLV 38
Query: 61 H--PCFHPDGKPAPTSYDD-VFKSIFDYIDHIFL-LVRPRKLLYLAIDGVAPRAKMNQQR 116
+ G T D + + +FD +D I L LVRPR L+YLA+DGV+P K++QQR
Sbjct: 39 YQAAALVTSGGVDCTDIDAAIIQRVFDLLDDIVLKLVRPRSLVYLAVDGVSPMGKLSQQR 98
Query: 117 TRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQ 176
+RR R + ++A DSN I+ GT FM+ L+ AL
Sbjct: 99 SRRRRRRRQDPHSQAHGTEW--------------------DSNSISVGTSFMSSLANALH 138
Query: 177 YFIQARLNQIP----------------GWQFTK-------VILSDANVPGEGEHKIMSYI 213
++ +R Q+ G T+ ++ PGEGE KI I
Sbjct: 139 FYCVSRTEQVNVERLREHRRRSRPVDIGSSLTEEQPPLITFVVDGVWRPGEGECKITDAI 198
Query: 214 RLQRNLPGFDPNTRHCLYGLDADLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGH 273
R R+ P +DPNT H + D D+ + SL HE H +LR
Sbjct: 199 RRFRSQPNYDPNTSHVICSSDTDMTVCSLILHEPHIHVLRYE------------------ 240
Query: 274 LAAECHGKPGDNPADWNGVDDTPIHKKKYQFLNIWVLREYLQYELDIPNPPFPIN----- 328
H G + +G + F +I RE L+ L + +
Sbjct: 241 -----HAPRGTSKGVSDGWTRSAGDSWASTFFSINAFREELRSRLRLERCANNTDTAGGV 295
Query: 329 ------FERIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHVYRREFTAMGGYLTD 381
FE + D VF+ GNDFLP + I EG ++ L+ + +F G + D
Sbjct: 296 ERCDRLFESALHDVVFVLLLFGNDFLPSV-GCRIEEGFLDSLLEMLATDFVTRGLSIVD 353
>gi|343959368|dbj|BAK63541.1| 5'-3' exoribonuclease 2 [Pan troglodytes]
Length = 370
Score = 112 bits (281), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 71/167 (42%), Positives = 94/167 (56%), Gaps = 11/167 (6%)
Query: 526 EPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVK 585
+PF+P +QLMG PAAS + LP +R LM+DP S I FYP DF ID+NGK++AWQGV
Sbjct: 10 KPFKPLEQLMGVFPAASGNFLPPSWRKLMSDPDSSIIDFYPEDFAIDLNGKKYAWQGVAL 69
Query: 586 LPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVHPQHPLYQQITLYCQLYHQLPPQ 645
LPF+DE+ L +++ LT EE RNS+ D+L+V HPL+ I Q P
Sbjct: 70 LPFVDERRLRAALEEVYPDLTPEETRRNSLGGDVLFVGKHHPLHDFILELYQTGSTEP-- 127
Query: 646 DRFAWEIDVNAS--GGMNGYIWLCERNGL-RSIIPSPVKGLPDIERN 689
+DV G+ G L E L I+ SPV L D+ +N
Sbjct: 128 ------VDVPPELCHGIQGKFSLDEEAILPDQIVCSPVPMLRDLTQN 168
>gi|154422101|ref|XP_001584063.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121918308|gb|EAY23077.1| hypothetical protein TVAG_183130 [Trichomonas vaginalis G3]
Length = 859
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 125/584 (21%), Positives = 216/584 (36%), Gaps = 139/584 (23%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGV + RYPLS + E P P ++ LY+D + ++
Sbjct: 1 MGVKGLLYQIRKRYPLSCRTLSE-----------------IPYP---AYNCLYIDASTLL 40
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
T ++ F D + L++P L+Y+A++G P +K R +
Sbjct: 41 VAAISIKSSKLNTLNEENITFAFHLFDSLVHLLQPTDLIYIALEGSQPISKTYATHNRFY 100
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQ 180
+ N+I + L+ +IQ
Sbjct: 101 Q------------------------------------RNMIEQHDSIRNLFQPHLKSWIQ 124
Query: 181 ARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
++ W+ KVI + + VPGE E KI YIR + N P +D N RHC++ D+DLI++
Sbjct: 125 EKIKNDDIWKRPKVIFAGSAVPGEAETKIFDYIRQEMNKPDWDLNKRHCIFTPDSDLILM 184
Query: 241 SLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIHKK 300
+L +H +F ++ + N + PI
Sbjct: 185 TLRSHIQNFDLIYQNYRF--------------------------NLVRGTRTPNFPITPS 218
Query: 301 KYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGA 360
++I +LREYL+ + +I + E+I DDFV +C +G+D+ P ++
Sbjct: 219 SLTVISINILREYLKLDFEIAD-------EQIFDDFVTICDILGSDYCA--PLEDVVNLD 269
Query: 361 INLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYEYNEA 420
+ L+ Y+ E ++TD D ++ F+ N+
Sbjct: 270 LESLIQSYKSE--PHCNFITDCDNFNFDNLKIFL-----------------------NKI 304
Query: 421 MKLNARRESSEELLQAPVAVADTVKLGEPGYKERYYADKFEIS--NPEEIDKVKKDVVLK 478
+K A R+S+ Y E+ + FE PEE +K+ V
Sbjct: 305 LKHIAERKST----------------TYTKYVEKQRKNYFETRKVTPEETEKISHCV--- 345
Query: 479 YVEGLCWVCRYYYQDVCSWQWFYPYHYA-PFASDLKDLSDLEITFFLGEPFRPFDQLMGT 537
++ L ++ + Y + SW W Y YH+A P L + + EP LM +
Sbjct: 346 -LDSLLYIVKSYAIGIPSWSWVYQYHFAPPLCVVLDYIETFKSQLVQDEPTNLLQSLMVS 404
Query: 538 LPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQ 581
L SS + P + TDP + + + D +RF ++
Sbjct: 405 LKGISSLSPPYFVQLRETDPYLKSLRRDISEIEYDETNERFKFE 448
>gi|407868229|gb|EKG08789.1| 5'-3' exonuclease XRNC, putative [Trypanosoma cruzi]
Length = 879
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 112/415 (26%), Positives = 164/415 (39%), Gaps = 96/415 (23%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP WL R+ + S P D LY+D+NG++
Sbjct: 1 MGVPLLLTWLKRRFAPCFLS-------------------SSSCPAA---DCLYIDVNGLV 38
Query: 61 HPCFHPDGKPAPTSYD---DVFKSIFDYIDHIFL-LVRPRKLLYLAIDGVAPRAKMNQQR 116
+ ++ D + + +FD ID I L LVRPR L+YLA+DG++P K+ QQR
Sbjct: 39 YQAAALATASEASAVDIDAAILRKLFDIIDDIVLRLVRPRFLVYLAVDGISPMGKLAQQR 98
Query: 117 TRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQ 176
+RR R + + E DSN I+ GT FM+ L+ AL
Sbjct: 99 SRRRRRSGGGSRGRNAVE---------------------WDSNSISVGTPFMSRLTEALH 137
Query: 177 YFIQARLNQIPGWQF---------------------TKVILSDANVPGEGEHKIMSYIRL 215
++ +R +I G + I+ D PGEGE KI IR
Sbjct: 138 FYCASRAERINGERLRDELQQVARGNTTGGDVPVTPITFIVDDVWRPGEGESKIADAIRR 197
Query: 216 QRNLPGFDPNTRHCLYGLDADLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLA 275
R+ +DPNT H + D D+ + SL HE +LR + C H
Sbjct: 198 FRSQSTYDPNTSHIICSSDTDVTVCSLILHEPRIHVLR------------YECSPSHHGG 245
Query: 276 AECHGKPGDNPADWNGVDDTPIHKKKYQFLNIWVLREYLQYELDIPNPPFPI-------- 327
G GD+ + N V D F +I R L+ +L +
Sbjct: 246 GASRG--GDSGSWRNQVGDA----WASTFFSIHAFRGELRNKLRLQTSRKDSAEEAERRN 299
Query: 328 -NFERIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHVYRREFTAMGGYLTD 381
FER + D VF+ GNDFLP + I EG ++ L+ + +F + + D
Sbjct: 300 RQFERALHDVVFVLLLFGNDFLPSV-GCRIEEGFLDDLLELLATDFISRDRSIID 353
>gi|147838081|emb|CAN65206.1| hypothetical protein VITISV_016718 [Vitis vinifera]
Length = 389
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 51/87 (58%), Positives = 58/87 (66%)
Query: 604 FLTEEELFRNSVMLDLLYVHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVNASGGMNGY 663
++ EE RNSVM DLLYVH HPL Q+ Y Y PP R W ID+NASGGMNGY
Sbjct: 3 YMQVEEQVRNSVMFDLLYVHAVHPLATQVIYYYHFYQSSPPLARVIWPIDINASGGMNGY 62
Query: 664 IWLCERNGLRSIIPSPVKGLPDIERNQ 690
+WLCERNG RS PS + GL +IE NQ
Sbjct: 63 LWLCERNGWRSEFPSSISGLQNIEHNQ 89
>gi|261330307|emb|CBH13291.1| 5'-3' exonuclease XRNC, putative [Trypanosoma brucei gambiense
DAL972]
Length = 960
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 120/484 (24%), Positives = 192/484 (39%), Gaps = 113/484 (23%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP WL R+ + P+ + + D LY+D+NG++
Sbjct: 93 MGVPLLLTWLRRRFAACFL----------------------PSNSNVSADCLYIDVNGLV 130
Query: 61 H--PCFHPDGKPAPTSYDD-VFKSIFDYIDHIFL-LVRPRKLLYLAIDGVAPRAKMNQQR 116
+ G P + + + +FD +D I L LVRPR L+YLA+DG++P K+ QQR
Sbjct: 131 YQAATLATSGGGDPADIEAAILRRLFDLLDDIVLRLVRPRSLVYLAVDGISPMGKLAQQR 190
Query: 117 TRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQ 176
+RR R + + + DSN I+ GT FM+ L+ AL
Sbjct: 191 SRRRRRRRQDPHSHV--------------------RTTEWDSNSISVGTSFMSSLTDALH 230
Query: 177 YFIQARLNQIPGWQFTK-------------------------VILSDANV--PGEGEHKI 209
++ +R +I + + + NV PGEGE KI
Sbjct: 231 FYCASRAERINVERLREYKQRDVGKDVASAGFPANEKAAPSLITFVSDNVWRPGEGESKI 290
Query: 210 MSYIRLQRNLPGFDPNTRHCLYGLDADLIMLSLATHEIHFSILREVITLPGQQEKCFVCG 269
IR R+ P +DPNT H + D D+ + SL HE + +LR
Sbjct: 291 ADAIRRFRSQPNYDPNTAHVICSSDTDVTVCSLILHEPNIHVLR---------------- 334
Query: 270 QVGHLAAECHGKPGDNPADWNGVDDTPIHKKKYQFLNIWVLREYLQYELDIPNP------ 323
H++A K G+N +W F +I+ RE L+ L I
Sbjct: 335 -YEHVSAST-AKGGNN--NWQTYAGDSWAST---FFSIYAFREELRLRLRIEQTCSNTMS 387
Query: 324 -----PFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHVYRREFTAMGGY 378
FE + D VF+ GNDFLP + I EG ++ L+ + +F G
Sbjct: 388 AEELEKLNKQFEAALHDVVFVLLLFGNDFLPSVG-CRIEEGFLDSLLEMLATDFVTRGRS 446
Query: 379 LTD--AGEVLLDRVEKFIQSVAVYEDQI---FQKRTRIQQAYEYNEAMKLNARRESSEEL 433
+ D + D ++S+A ++ Q + A ++ + +R+++EE
Sbjct: 447 IVDPVTNTIQFDAARYALESLAEMRNERSGGLQVDNGAEGAADWGFVNEQFLQRKAAEEA 506
Query: 434 LQAP 437
+AP
Sbjct: 507 EKAP 510
>gi|72392625|ref|XP_847113.1| 5'-3' exonuclease XRNC [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|62176006|gb|AAX70128.1| 5'-3' exonuclease XRNC, putative [Trypanosoma brucei]
gi|70803143|gb|AAZ13047.1| 5'-3' exonuclease XRNC, putative [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
Length = 868
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 120/484 (24%), Positives = 192/484 (39%), Gaps = 113/484 (23%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP WL R+ + P+ + + D LY+D+NG++
Sbjct: 1 MGVPLLLTWLRRRFAACFL----------------------PSNSNVSADCLYIDVNGLV 38
Query: 61 H--PCFHPDGKPAPTSYDD-VFKSIFDYIDHIFL-LVRPRKLLYLAIDGVAPRAKMNQQR 116
+ G P + + + +FD +D I L LVRPR L+YLA+DG++P K+ QQR
Sbjct: 39 YQAATLATSGGGDPADIEAAILRRLFDLLDDIVLRLVRPRSLVYLAVDGISPMGKLAQQR 98
Query: 117 TRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQ 176
+RR R + + + DSN I+ GT FM+ L+ AL
Sbjct: 99 SRRRRRRRQDPHSHV--------------------RTTEWDSNSISVGTSFMSSLTDALH 138
Query: 177 YFIQARLNQIPGWQFTK-------------------------VILSDANV--PGEGEHKI 209
++ +R +I + + + NV PGEGE KI
Sbjct: 139 FYCASRAERINVERLREYKQRDVGKDVASAGFPANEKAAPSLITFVSDNVWRPGEGESKI 198
Query: 210 MSYIRLQRNLPGFDPNTRHCLYGLDADLIMLSLATHEIHFSILREVITLPGQQEKCFVCG 269
IR R+ P +DPNT H + D D+ + SL HE + +LR
Sbjct: 199 ADAIRRFRSQPSYDPNTAHVICSSDTDVTVCSLILHEPNIHVLR---------------- 242
Query: 270 QVGHLAAECHGKPGDNPADWNGVDDTPIHKKKYQFLNIWVLREYLQYELDIPNP------ 323
H++A K G+N +W F +I+ RE L+ L I
Sbjct: 243 -YEHVSAST-AKGGNN--NWQTYAGDSWAST---FFSIYAFREELRLRLRIEQTRSNTMS 295
Query: 324 -----PFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHVYRREFTAMGGY 378
FE + D VF+ GNDFLP + I EG ++ L+ + +F G
Sbjct: 296 AEELEKLNKQFEAALHDVVFVLLLFGNDFLPSVG-CRIEEGFLDSLLEMLATDFVTRGRS 354
Query: 379 LTD--AGEVLLDRVEKFIQSVAVYEDQI---FQKRTRIQQAYEYNEAMKLNARRESSEEL 433
+ D + D ++S+A ++ Q + A ++ + +R+++EE
Sbjct: 355 IVDPVTNTIQFDAARYALESLAEMRNERSSGLQVDNGAEGAADWGFVNEQFLQRKAAEEA 414
Query: 434 LQAP 437
+AP
Sbjct: 415 EKAP 418
>gi|407394522|gb|EKF26964.1| 5'-3' exonuclease XRNC, putative [Trypanosoma cruzi marinkellei]
Length = 367
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 109/393 (27%), Positives = 157/393 (39%), Gaps = 96/393 (24%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP WL R+ + S P D LY+D+NG++
Sbjct: 1 MGVPLLLTWLKRRFAPCFLS-------------------SSSCPAA---DCLYIDVNGLV 38
Query: 61 HPCFHPDGKPAPTSYD---DVFKSIFDYIDHIFL-LVRPRKLLYLAIDGVAPRAKMNQQR 116
+ ++ D + + +FD +D I L LVRPR L+YLA+DG++P K+ QQR
Sbjct: 39 YQAAALATASEASAVDIDAAILRKLFDILDDIVLRLVRPRFLVYLAVDGISPMGKLAQQR 98
Query: 117 TRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQ 176
+RR R + + E DSN I+ GT FM+ L+ AL
Sbjct: 99 SRRRRRSGGGSRGRNAVE---------------------WDSNSISVGTPFMSRLTEALH 137
Query: 177 YFIQARLNQIPGWQF---------------------TKVILSDANVPGEGEHKIMSYIRL 215
++ +R ++ G + I+ D PGEGE KI IR
Sbjct: 138 FYCASRAERMNGERLRDELQQAARGNTRGGDDPVTPITFIVDDVWRPGEGESKIADAIRR 197
Query: 216 QRNLPGFDPNTRHCLYGLDADLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLA 275
R+ P +DPNT H + D D+ + SL HE +LR + C H
Sbjct: 198 FRSQPTYDPNTSHIICSSDTDVTVCSLILHEPRIHVLR------------YECSPSHHSG 245
Query: 276 AECHGKPGDNPADWNGVDDTPIHKKKYQFLNIWVLREYLQYELDIPNPPFPIN------- 328
G GD+ + N V D F +I+ RE L+ +L +
Sbjct: 246 GASRG--GDSGSWRNQVGDA----WASTFFSIYAFREALRNKLRLQTSRKDSTEEVERRN 299
Query: 329 --FERIVDDFVFLCFFVGNDFLPHMPTLEIREG 359
FER + D VF+ GNDFLP + I EG
Sbjct: 300 RQFERALHDVVFVLLLFGNDFLPSV-GCRIEEG 331
>gi|398015544|ref|XP_003860961.1| 5'-3' exonuclease XRNC, putative [Leishmania donovani]
gi|322499185|emb|CBZ34256.1| 5'-3' exonuclease XRNC, putative [Leishmania donovani]
Length = 1068
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 153/644 (23%), Positives = 228/644 (35%), Gaps = 149/644 (23%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP WL R+ + P D + + DNL++D+N +
Sbjct: 1 MGVPLLLTWLRKRFADCFM----------------PADSAVTDYIRESTDNLFIDLNSFL 44
Query: 61 ----------HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFL-LVRPRKLLYLAIDGVAPR 109
H D D V + +FD +D + + LV+P+ L+Y+A+DGV+P
Sbjct: 45 YQAATIITATHRSLRFDS--VDEVEDVVLRKLFDLLDDLVMNLVQPKALVYIAVDGVSPL 102
Query: 110 AKMNQQRTRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMA 169
KM+QQR R + A + E AG + + DSN I+ GT+FMA
Sbjct: 103 GKMSQQRA--RRRRGARRQPSASSSSPSRHHEPAGNI------NDLWDSNCISVGTRFMA 154
Query: 170 VLSAALQYFIQARLNQIPG------------------------------WQFTKVILSDA 199
++ AL ++ +R +I + F +I+ D
Sbjct: 155 KVTEALHFYAVSRTERINAKRLREERVRIDKADASVDSAAGDSAGAPYVFPFLSIIVDDV 214
Query: 200 NVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIMLSLATHE------------- 246
PGEGE+KI +IR R P + PNT H + D D+ + SL HE
Sbjct: 215 LRPGEGENKIAEFIRRIRADPSYGPNTSHVICSSDTDVTVTSLILHEPRIHVLRYEPPVS 274
Query: 247 -------------------------IHFSILREVITLPGQQEKCFVCGQVGHLAAECHGK 281
+ FS + P V G+ GH HG
Sbjct: 275 LGGKLPMKSQPPPQHHHHHRSHHQHVRFSSHPHRGSGPSSHGPRRVDGRSGH---AHHGA 331
Query: 282 PGDNPADWNGVDDTPIHKKKY---QFLNIWVLREYLQYEL------------------DI 320
P +P G P K F +I V R+ L+ L +
Sbjct: 332 PRPSPRHGAGAAAQPPPPKDSWLSTFFSIHVFRQRLRGILHLSPSSDAASALAGAAVPSV 391
Query: 321 PNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHVYRREFTAMGGYLT 380
+ FE + D VF+ GNDFLP + I+EG ++ L+ + +F G L
Sbjct: 392 DAEEAALTFEHALHDVVFVLLLFGNDFLPTIGG-SIQEGTLDALLSLLATDFVPRGRTLV 450
Query: 381 DAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYEYNEAMKLNARRESSEELLQAPVAV 440
D A Q R + E + NA++ S LQ
Sbjct: 451 DP---------------ATNRIQYASARYLLSCLAE----LPGNAKKGGSGGRLQVHNGG 491
Query: 441 ADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWF 500
+D + G KE D I + +K + + Y L W +Y V W +
Sbjct: 492 SDALDWGFTAEKEAKERDPAFIERQQRREKQHERMCYCYWTMLQWALQYSAGIVEHWGCY 551
Query: 501 YPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSS 544
YPY AP S L + LGE R ++ A+SS
Sbjct: 552 YPYGRAPPLSKLATYCGVLTYSALGEIARRRLEMNAAAGRATSS 595
>gi|339898255|ref|XP_003392512.1| putative 5'-3' exonuclease XRNC [Leishmania infantum JPCM5]
gi|321399477|emb|CBZ08676.1| putative 5'-3' exonuclease XRNC [Leishmania infantum JPCM5]
Length = 1068
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 152/642 (23%), Positives = 229/642 (35%), Gaps = 145/642 (22%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP WL R+ + P D + + DNL++D+N +
Sbjct: 1 MGVPLLLTWLRKRFADCFM----------------PADSAVTDYIRESTDNLFIDLNSFL 44
Query: 61 H------PCFHPDGK--PAPTSYDDVFKSIFDYIDHIFL-LVRPRKLLYLAIDGVAPRAK 111
+ H + D V + +FD +D + + LV+P+ L+Y+A+DGV+P K
Sbjct: 45 YQAATIITATHRSLRFNSVDEVEDVVLRKLFDLLDDLVMNLVQPKALVYIAVDGVSPLGK 104
Query: 112 MNQQRTRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVL 171
M+QQR R + A + E AG + + DSN I+ GT+FMA +
Sbjct: 105 MSQQRA--RRRRGARRQPSASSSSPSRHHEPAGNI------NDLWDSNCISVGTRFMAKV 156
Query: 172 SAALQYFIQARLNQIPG------------------------------WQFTKVILSDANV 201
+ AL ++ +R +I + F +I+ D
Sbjct: 157 TEALHFYAVSRTERINAKRLREERVRIDKADASVDSAAGDSAGAPYVFPFLSIIVDDVLR 216
Query: 202 PGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIMLSLATHE--------------- 246
PGEGE+KI +IR R P + PNT H + D D+ + SL HE
Sbjct: 217 PGEGENKIAEFIRRIRADPSYGPNTSHVICSSDTDVTVTSLILHEPRIHVLRYEPPVSLG 276
Query: 247 -----------------------IHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPG 283
+ FS + P V G+ GH HG P
Sbjct: 277 GKLPMKSQPPPQHHHHHRSHHQHVRFSSHPHSGSGPSSHGPRRVDGRSGH---AHHGAPR 333
Query: 284 DNPADWNGVDDTPIHKKKY---QFLNIWVLREYLQYEL------------------DIPN 322
+P G P K F +I V R+ L+ L +
Sbjct: 334 PSPRHGAGAAAQPPPPKDSWLSTFFSIHVFRQRLRGILHLSPSSDAASALAGAAVPSVDA 393
Query: 323 PPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHVYRREFTAMGGYLTDA 382
+ FE + D VF+ GNDFLP + I+EG ++ L+ + +F G L D
Sbjct: 394 EEAALTFEHALHDVVFVLLLFGNDFLPTIGG-SIQEGTLDALLSLLATDFVPRGRTLVDP 452
Query: 383 GEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYEYNEAMKLNARRESSEELLQAPVAVAD 442
A Q R + E + NA++ S LQ +D
Sbjct: 453 ---------------ATNRIQYASARYLLSCLAE----LPGNAKKGGSGGRLQVHNGGSD 493
Query: 443 TVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYP 502
+ G KE D I + +K + + Y L W +Y V W +YP
Sbjct: 494 ALDWGFTAEKEAKERDPAFIERQQRREKQHERMCYCYWTMLQWALQYSAGIVEHWGCYYP 553
Query: 503 YHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSS 544
Y AP S L + LGE R ++ A+SS
Sbjct: 554 YGRAPPLSKLATYCGVLTYSALGEIARRRLEMNAAAGRATSS 595
>gi|291336199|gb|ADD95772.1| hypothetical protein [uncultured organism MedDCM-OCT-S08-C195]
Length = 293
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 132/296 (44%), Gaps = 64/296 (21%)
Query: 78 VFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRFRAAKDAAEAEAEEERLR 137
V +I YI++I +P + +Y+A DGVAP AKMNQQRTRR + +
Sbjct: 38 VINTIGIYIEYI----QPSETVYIAFDGVAPFAKMNQQRTRRHKGMITS----------- 82
Query: 138 KEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQARLNQIPG-WQFTKVIL 196
+ ++ E ++ ITPGT FM LS + + G + K+I+
Sbjct: 83 ----KINNVIGVNENQMKWTTSHITPGTLFMNKLSNR----VTKAFGGLEGHYGVKKIIV 134
Query: 197 SDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIMLSLATHEI--HFSILRE 254
S ++ GEGEHK+ Y+R ++ +T +YGLD+DLIMLSL E+ + I RE
Sbjct: 135 SCSDEAGEGEHKLFQYVRSHKDTF---QDTNMVIYGLDSDLIMLSLFHCEMFKNLYIFRE 191
Query: 255 VITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIHKKKYQFLNIWVLREYL 314
P G+ Y +++I L +
Sbjct: 192 T------------------------------PEFGKGILSEEQCSMDYMYMHIHSLARAI 221
Query: 315 QYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHVYRR 370
E+ + + D++F+CF +GNDFLPH P+L IR I +L+ Y++
Sbjct: 222 LIEMSCDEGQYFRLY-----DYMFMCFLLGNDFLPHFPSLNIRTMGIEVLLDNYKK 272
>gi|389601315|ref|XP_001565132.2| putative 5'-3' exonuclease XRNC [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|322504991|emb|CAM36567.2| putative 5'-3' exonuclease XRNC [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 1065
Score = 110 bits (274), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 151/627 (24%), Positives = 226/627 (36%), Gaps = 145/627 (23%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP WL R+ + P D + N DNL++D+N +
Sbjct: 1 MGVPLLLTWLRKRFADCFM----------------PADSAVTNYIRESTDNLFIDLNSFL 44
Query: 61 H------PCFHPDGKPAPTSY--DDVFKSIFDYIDHIFL-LVRPRKLLYLAIDGVAPRAK 111
+ H + + D V + +FD +D + LV+P+ L+Y+A+DGV+P K
Sbjct: 45 YQAATIITATHRSHRFSSVDEVEDVVLRKLFDLLDDLVSNLVQPKALVYIAVDGVSPLGK 104
Query: 112 MNQQRTRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVL 171
M+QQR RR R A+ A E AG + + DSN I+ GT+FMA +
Sbjct: 105 MSQQRARRRRGARRQPSAWPSSS--FHHHEPAGNI------NDLWDSNCISVGTRFMAKV 156
Query: 172 SAALQYFIQARLNQIP------------------------------GWQFTKVILSDANV 201
+ AL ++ +R +I + F +I+ D
Sbjct: 157 TEALHFYAVSRTERINAKRLREERVRIASADASVDSAARDSAGLPYAFPFLNIIVDDVLR 216
Query: 202 PGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIMLSLATHEIHFSILR-------- 253
PGEGE+KI +IR R + PNT H + D D+ + SL HE +LR
Sbjct: 217 PGEGENKIAEFIRRIRADSSYGPNTSHVICSSDTDVTVTSLILHEPRIHVLRYEPPASLG 276
Query: 254 ---EVITLPGQQEKCF---------------------------VCGQVGHLAAECHGKPG 283
+ T P Q V G+ GH G P
Sbjct: 277 GRPPMKTQPPPQHHHHHRNHHGHVRFSSHPHRGGGPSLHGPRRVDGRGGHAH---RGPPR 333
Query: 284 DNPADWNGVDDTPIHKKK---YQFLNIWVLREYLQYELD------------------IPN 322
+P G P H K F +I V R+ L+ L +
Sbjct: 334 SSPGHCTGAAAQPSHVKDSWLSTFFSIHVFRQRLREILHMSPGDDTATAVADAAVSPVDA 393
Query: 323 PPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHVYRREFTAMGGYLTDA 382
+ FE + D VF+ GNDFLP + I+EG ++ L+ + +F G L +
Sbjct: 394 EEATLTFEHALHDVVFVLLLFGNDFLPTIGG-SIQEGTLDALLSLLATDFVPRGRTLVNP 452
Query: 383 GEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYEYNEAMKLNARRESSEELLQAPVAVAD 442
A Q R + + E + A+R SE LQ
Sbjct: 453 ---------------ATNHIQFASARYLLSRLAE----LPGKAKRGGSEGPLQVHNGGCG 493
Query: 443 TVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYP 502
++ G KE + + + +K + + Y L W +Y V W +YP
Sbjct: 494 ALEWGFTDEKEAKAHEPTFVERQQRREKQHESMCYCYWTMLQWALQYSAGIVEHWGCYYP 553
Query: 503 YHYAPFASDLKDLSDLEITFFLGEPFR 529
Y AP S L + LGE R
Sbjct: 554 YGRAPPLSKLATYCGVLSYDALGEIAR 580
>gi|168067648|ref|XP_001785722.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162662628|gb|EDQ49457.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 68
Score = 109 bits (272), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 48/69 (69%), Positives = 60/69 (86%), Gaps = 1/69 (1%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVPAFYRWLAD+YPL +VDV+E++ V EGV P+D ++PNPNG+E+DNLYLDMNGII
Sbjct: 1 MGVPAFYRWLADKYPLIVVDVIEDEQHV-IEGVKVPIDTTQPNPNGLEYDNLYLDMNGII 59
Query: 61 HPCFHPDGK 69
HPCFHP+ +
Sbjct: 60 HPCFHPEDR 68
>gi|389600932|ref|XP_001563893.2| putative 5'-3' exonuclease [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|322504577|emb|CAM37939.2| putative 5'-3' exonuclease [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 1108
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 88/307 (28%), Positives = 134/307 (43%), Gaps = 36/307 (11%)
Query: 322 NPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHVYRREFTAMGGYLTD 381
+P +IVDDF+ L +GNDFLPH+P++ E A++ LM VY R G YLT
Sbjct: 511 HPCTSTGNSKIVDDFIVLGMLLGNDFLPHLPSVYCGESAMDTLMDVYTRAVLPYG-YLTG 569
Query: 382 A-GEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYEYNEAMKLNARRESSEELLQAPVAV 440
E+ L ++E+ +++ A E F++ IQ + + ++ EL A
Sbjct: 570 VKCEIQLAQLERLLRAYAAVEAVRFRQFA-IQSG-------TMTPQEAATPELCSA---- 617
Query: 441 ADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDV--CSWQ 498
AD R + D + + + + YVEGL +V RYY +W
Sbjct: 618 AD----------HRCWRDVYVRTTSLRDEAGTQAACRSYVEGLQFVWRYYSSVSLQVNWA 667
Query: 499 WFYPYHYAPFASDLKDL---------SDLEITFFLGEPFRPFDQLMGTLPAASSSALPEK 549
W+YP+++AP A D+ D + L G+P PF QL+ LP S +PE
Sbjct: 668 WYYPFYHAPLALDIADFLRAQGPQVQTTLAALELEGQPPSPFCQLLCILPPPSRQLVPEA 727
Query: 550 YRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQ-GVVKLPFIDEKLLLRQTKKLEVFLTEE 608
R MT P + + +P + +D G V LPF + L T E
Sbjct: 728 LRAAMTSPPAELVDTFPHRWVVDRTGAYGKDHLAAVLLPFANLPPLQGLVAAASGIYTAE 787
Query: 609 ELFRNSV 615
E RN++
Sbjct: 788 EKQRNTL 794
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/125 (40%), Positives = 68/125 (54%), Gaps = 25/125 (20%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP F WL +YP ++ P DV LY+D+NG+I
Sbjct: 1 MGVPKFAAWLRKKYPSMVMARC-------------PGDV----------HGLYIDLNGLI 37
Query: 61 HPCFHPDGKP--APTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
HPC H + P A + + +SI I+ + + VRP+ LLY+AIDGVAPRAKMNQQR R
Sbjct: 38 HPCCHNEHDPSVALRTEEGKLRSICLAIETLVVTVRPQHLLYIAIDGVAPRAKMNQQRLR 97
Query: 119 RFRAA 123
R+ +A
Sbjct: 98 RYMSA 102
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 70/139 (50%), Gaps = 26/139 (18%)
Query: 142 EAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQARL---------------NQI 186
+AG+ +A P DSN I+PGT FM ++AA++ +I +L
Sbjct: 203 QAGRQPTACAPPARFDSNCISPGTVFMDAVAAAVRDYIHRKLAPKANDGGDSAEVEAGSS 262
Query: 187 PG-----------WQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDA 235
P W V+ SD+N GEGEHK++ ++R Q PGF+ + H + GLDA
Sbjct: 263 PSSSTTINAPCAHWAGLTVVFSDSNTAGEGEHKLVDFLRTQSAFPGFNGSGCHVIAGLDA 322
Query: 236 DLIMLSLATHEIHFSILRE 254
DLI LSL+ H ILR+
Sbjct: 323 DLIFLSLSLHIPRVVILRD 341
>gi|413921161|gb|AFW61093.1| hypothetical protein ZEAMMB73_651968 [Zea mays]
Length = 480
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/122 (48%), Positives = 76/122 (62%), Gaps = 2/122 (1%)
Query: 573 MNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVHPQHPLYQQI 632
MNGKRF+WQG+ KLPFI+E LL + KK+E LT EE RNS M ++L+V+ H L I
Sbjct: 1 MNGKRFSWQGIAKLPFIEEDRLLAEIKKVEDTLTPEEARRNSTMCNMLFVNGAHSLSPYI 60
Query: 633 TLYCQLYHQLPPQDRFAW--EIDVNASGGMNGYIWLCERNGLRSIIPSPVKGLPDIERNQ 690
+ LP +DR A ++D +ASGGMNGYI LC + + SPV GL DI NQ
Sbjct: 61 YSLNSKFGHLPDKDRGAIKEKLDPSASGGMNGYIALCGGDPSPPVFRSPVDGLEDIMDNQ 120
Query: 691 AM 692
+
Sbjct: 121 VI 122
>gi|219125787|ref|XP_002183154.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217405429|gb|EEC45372.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 151
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/144 (40%), Positives = 87/144 (60%), Gaps = 19/144 (13%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGE----GVARPVDVSKPNPNGM-----EFDN 51
MGVP F+RWL++RYP ++ P + G P ++ KP+P E D
Sbjct: 1 MGVPKFFRWLSERYP-KVIQRHGCPPNAETTQEHFGTDPPANMPKPDPLSTCGLAPEIDR 59
Query: 52 LYLDMNGIIHPCFHPDGKP--------APTSYDDVFKSIFDYIDHIFL-LVRPRKLLYLA 102
LY+DMNGIIH C H + + A S D++F++I Y+D + + +P++L+Y+A
Sbjct: 60 LYIDMNGIIHGCSHNNSEAEENGEEGVANISEDEIFRNICYYLDRVVKDIAKPKQLVYMA 119
Query: 103 IDGVAPRAKMNQQRTRRFRAAKDA 126
IDGVAPRAK+NQQR+RR+R+ K+
Sbjct: 120 IDGVAPRAKLNQQRSRRYRSGKEG 143
>gi|157869656|ref|XP_001683379.1| putative 5'-3' exonuclease XRNC [Leishmania major strain Friedlin]
gi|68126444|emb|CAJ04205.1| putative 5'-3' exonuclease XRNC [Leishmania major strain Friedlin]
Length = 1068
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 152/627 (24%), Positives = 228/627 (36%), Gaps = 145/627 (23%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP WL R+ + P D + + DNL++D+N +
Sbjct: 1 MGVPLLLTWLRKRFADCFM----------------PADSAVTDYIRESTDNLFIDLNSFL 44
Query: 61 HPCFHPDGKPAPT----SYDDV----FKSIFDYIDHIFL-LVRPRKLLYLAIDGVAPRAK 111
+ + S D+V + +FD +D + + LV+P+ L+Y+A+DGV+P K
Sbjct: 45 YQAATIITATHRSLRFNSVDEVENAVLRKLFDLLDDLVMNLVQPKALVYIAVDGVSPLGK 104
Query: 112 MNQQRTRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVL 171
M+QQR RR R A+ A E AG + + DSN I+ GT+FMA +
Sbjct: 105 MSQQRARRRRGARRQPSASPSSP--FHHHEPAGNI------NDLWDSNCISVGTRFMAKV 156
Query: 172 SAALQYFIQARLNQIPG------------------------------WQFTKVILSDANV 201
+ AL ++ +R +I + F +I+ D
Sbjct: 157 TEALHFYAVSRTERINAKRLREEQVRIDKADASVDSAASDSAGAPYVFPFISIIVDDVLR 216
Query: 202 PGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIMLSLATHEIHFSILR--EVITL- 258
PGEGE+KI +IR R P + PNT H + D D+ + SL HE +LR ++L
Sbjct: 217 PGEGENKIAEFIRRIRADPSYGPNTSHVICSSDTDVTVTSLILHEPRIHVLRYEPPVSLG 276
Query: 259 -----------------------------------PGQQEKCFVCGQVGHLAAECHGKPG 283
P V G+ GH HG P
Sbjct: 277 GKLPMKPQPPPQHHHHHRSHHQHVRFSSHPHRGSGPSSHGLRRVDGRNGH---AHHGAPR 333
Query: 284 DNPADWNGVDDTPIHKKK---YQFLNIWVLREYLQYELDIP-----------NPPFPINF 329
+P P K F +I V R+ L+ L + P++
Sbjct: 334 PSPGHGASAAAQPPPPKDSWLSTFFSIHVFRQRLREILHLSPGSDATSAVAGAAVSPVDA 393
Query: 330 ERI-------VDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHVYRREFTAMGGYLTDA 382
E + D VF+ GNDFLP + I+EG ++ L+ + +F G L D
Sbjct: 394 EEAALSFEHSLHDVVFVLLLFGNDFLPTIGG-SIQEGTLDALLSLLATDFVPRGRTLVDP 452
Query: 383 GEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYEYNEAMKLNARRESSEELLQAPVAVAD 442
A Q R + E + NA++ S LQ +D
Sbjct: 453 ---------------ATNRIQYASARYLLSCLAE----LPGNAKKGGSGGRLQVHNGGSD 493
Query: 443 TVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYP 502
+ G KE D I + +K + + Y L W +Y V W +YP
Sbjct: 494 ALDWGFTAEKEAKERDPAFIERQQRREKQHERMCYCYWTMLQWALQYSAGIVEHWGCYYP 553
Query: 503 YHYAPFASDLKDLSDLEITFFLGEPFR 529
Y AP S L + LGE R
Sbjct: 554 YGRAPPLSKLATYCGVLTYNALGEIAR 580
>gi|401422387|ref|XP_003875681.1| putative 5'-3' exonuclease XRNC [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322491920|emb|CBZ27193.1| putative 5'-3' exonuclease XRNC [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 1070
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 150/631 (23%), Positives = 228/631 (36%), Gaps = 153/631 (24%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP WL R+ + P D + + DNL++D+N +
Sbjct: 1 MGVPLLLTWLRKRFADCFM----------------PADSAVTDYIRRSTDNLFIDLNSFL 44
Query: 61 HPC------------FHPDGKPAPTSYDDVFKSIFDYIDHIFL-LVRPRKLLYLAIDGVA 107
+ FH D V + +FD +D + + LV+P+ L+Y+A+DGV+
Sbjct: 45 YQAATIITATHRTHRFHS----VDEVEDVVLRKLFDLLDDLVMNLVQPKALVYIAVDGVS 100
Query: 108 PRAKMNQQRTRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQF 167
P KM+QQR R ++ A + E AG + + DSN I+ GT+F
Sbjct: 101 PLGKMSQQRA--RRRRGARRQSSASPSSSFRHHEPAGNI------NDLWDSNCISVGTRF 152
Query: 168 MAVLSAALQYFIQARLNQIPG------------------------------WQFTKVILS 197
MA ++ AL ++ +R +I + F +I+
Sbjct: 153 MAKVTEALHFYAVSRTERINAKRLREERVRIDKADASVDSAAGDSTGESYVFPFISIIVD 212
Query: 198 DANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIMLSLATHEIHFSILR--EV 255
D PGEGE+KI +IR R P + PNT H + D D+ + SL HE +LR
Sbjct: 213 DVLRPGEGENKIAEFIRRIRADPSYGPNTSHVICSSDTDVTVTSLILHEPRIHVLRYEPP 272
Query: 256 ITLPGQ-----------------------------QEKC-------FVCGQVGHLAAECH 279
++L G+ + C V G+ GH H
Sbjct: 273 VSLGGKLPMKPQPPAQHHHQHRSHHQHVRFSSHPHRGSCPSSHGPRRVDGRSGHAH---H 329
Query: 280 GKPGDNPADWNGVDDTPIHKKK---YQFLNIWVLREYLQYELD----------------- 319
P + +G P K F +I V R+ L+ L
Sbjct: 330 SPPRPSSGHGDGAAAQPPPPKDSWLSTFFSIHVFRQRLREILHLSPGNDAASAVEGAAVS 389
Query: 320 -IPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHVYRREFTAMGGY 378
+ + FE + D VF+ GNDFLP + I+EG ++ L+ + +F G
Sbjct: 390 LVDAEEAALTFEHALHDVVFVLLLFGNDFLPTIGG-SIQEGTLDALLALLATDFVPRGRT 448
Query: 379 LTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYEYNEAMKLNARRESSEELLQAPV 438
L D A Q R + E + NA++ S LQ
Sbjct: 449 LVDP---------------ATNRIQYASARYLLSCLAE----LPGNAKKGGSGGRLQVHN 489
Query: 439 AVADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQ 498
+D + G KE D I + +K + + Y L W +Y V W
Sbjct: 490 GGSDALDWGFTAEKEAKERDPAFIERQQRREKQHERMCYCYWTMLQWALQYSAGIVEHWG 549
Query: 499 WFYPYHYAPFASDLKDLSDLEITFFLGEPFR 529
+YPY AP S L + LGE R
Sbjct: 550 CYYPYGRAPPLSKLATYCGVLTYNALGEIAR 580
>gi|407849156|gb|EKG03992.1| 5'-3' exonuclease XRNB, putative,exoribonuclease 2, putative
[Trypanosoma cruzi]
Length = 389
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 83/154 (53%), Gaps = 3/154 (1%)
Query: 451 YKERYYADKF--EISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPF 508
++++YY KF + ++ E +K + +Y+ G WV RYY SW W+YP++YAP
Sbjct: 23 HRDKYYEKKFGWDPADREAFEKKIQLCCAEYLRGTQWVMRYYTTGCPSWDWYYPFYYAPL 82
Query: 509 ASDLKDL-SDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPP 567
DL + + LG P P QL+ LP S ALPE+ + + DP S + FYP
Sbjct: 83 LQDLAHFPGKVNVKMTLGAPRHPVLQLLAVLPRLSVEALPEELHDAVKDPESVLGVFYPE 142
Query: 568 DFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKL 601
+D + F++QGV++LPF++ L +KL
Sbjct: 143 KVDVDFSEAHFSYQGVLRLPFVNNSHLQSACQKL 176
>gi|222636726|gb|EEE66858.1| hypothetical protein OsJ_23653 [Oryza sativa Japonica Group]
Length = 628
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/164 (42%), Positives = 91/164 (55%), Gaps = 17/164 (10%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGV AFYRWLADRYP ++ D VEE+P G PVD+ +PNPNG++FDNLYLDMNGII
Sbjct: 1 MGVLAFYRWLADRYPQTVSDAVEEEPVELEPGAFVPVDLRRPNPNGLKFDNLYLDMNGII 60
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDH-IFLLVRPRKLLYLAIDGVAPRAKMNQQRTRR 119
HPCFHP+G SY + S+F + I + P I +P A + R
Sbjct: 61 HPCFHPEGH--ARSYSPI-PSVFSSSNQPILCSISP------WIWTPSPAAGTDHLR--- 108
Query: 120 FRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITP 163
R A ++E + + F++A KLL K E N++ P
Sbjct: 109 -RGAALKGNFVEQDECVARNFKQAAKLLGLDSKLE---KNLLIP 148
>gi|336373302|gb|EGO01640.1| hypothetical protein SERLA73DRAFT_132069 [Serpula lacrymans var.
lacrymans S7.3]
Length = 70
Score = 103 bits (256), Expect = 4e-19, Method: Composition-based stats.
Identities = 43/70 (61%), Positives = 58/70 (82%)
Query: 56 MNGIIHPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQ 115
MNGI+HPC HPD KPAP + +++ IF Y + + +VRPRK+L++AIDGVAPRAKMNQQ
Sbjct: 1 MNGIVHPCTHPDNKPAPETEEEMMVDIFSYTERVVNMVRPRKVLFMAIDGVAPRAKMNQQ 60
Query: 116 RTRRFRAAKD 125
R+RRFR+A++
Sbjct: 61 RSRRFRSAQE 70
>gi|115471315|ref|NP_001059256.1| Os07g0238700 [Oryza sativa Japonica Group]
gi|113610792|dbj|BAF21170.1| Os07g0238700 [Oryza sativa Japonica Group]
gi|215695346|dbj|BAG90537.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215715337|dbj|BAG95088.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 182
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/164 (42%), Positives = 91/164 (55%), Gaps = 17/164 (10%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGV AFYRWLADRYP ++ D VEE+P G PVD+ +PNPNG++FDNLYLDMNGII
Sbjct: 1 MGVLAFYRWLADRYPQTVSDAVEEEPVELEPGAFVPVDLRRPNPNGLKFDNLYLDMNGII 60
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDH-IFLLVRPRKLLYLAIDGVAPRAKMNQQRTRR 119
HPCFHP+G SY + S+F + I + P I +P A + R
Sbjct: 61 HPCFHPEGH--ARSYSPI-PSVFSSSNQPILCSISPW------IWTPSPAAGTDHLR--- 108
Query: 120 FRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITP 163
R A ++E + + F++A KLL K E N++ P
Sbjct: 109 -RGAALKGNFVEQDECVARNFKQAAKLLGLDSKLE---KNLLIP 148
>gi|401418979|ref|XP_003873980.1| putative 5'-3' exonuclease [Leishmania mexicana MHOM/GT/2001/U1103]
gi|322490213|emb|CBZ25474.1| putative 5'-3' exonuclease [Leishmania mexicana MHOM/GT/2001/U1103]
Length = 1161
Score = 102 bits (255), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 129/299 (43%), Gaps = 36/299 (12%)
Query: 330 ERIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHVYRREFTAMGGYLTDAG-EVLLD 388
+I+DDF+ L +GNDFLPH+P++ E A++ LM VY R G YLT E+ L
Sbjct: 563 SKIIDDFIVLGVLLGNDFLPHLPSVYCGESAMDTLMDVYVRAVLPYG-YLTGGEYEIQLL 621
Query: 389 RVEKFIQSVAVYEDQIFQKRTRIQQAYEYNEAMKLNARRESSEELLQAPVAVADTVKLGE 448
++E+ ++ A E F++ A ++A ++ EL A AD
Sbjct: 622 QLERLFRAYAAVEAARFRQFVIQSGAMTPHDA--------ATPELCSA----AD------ 663
Query: 449 PGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDV--CSWQWFYPYHYA 506
R + D + + + + YVEG+ +V RYY SW W+YP+H+A
Sbjct: 664 ----RRCWRDVYVRTTSLRDEAGAQAACRSYVEGMRFVWRYYSSISLQVSWAWYYPFHHA 719
Query: 507 PFASDLKDL---------SDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDP 557
P A D+ D + L +P PF QL+ LP+ S +P+ R M P
Sbjct: 720 PLALDIADFLRAQGPQVQTTLAAPKLEWQPPSPFCQLLCILPSPSCQLVPDALRATMASP 779
Query: 558 SSPIYKFYPPDFQIDMNGKRFAWQ-GVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSV 615
+ + +P + +D G LPF + L TE E RN++
Sbjct: 780 PAELADTFPRRWVVDRTGAYGKDHLATALLPFANVPRLQELVAAASGTYTEAEQQRNAL 838
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 66/122 (54%), Gaps = 25/122 (20%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP F WL +YP ++D D LY+D+NG+I
Sbjct: 1 MGVPKFAAWLTRKYPSMVMDSCPGD-----------------------VHGLYIDLNGLI 37
Query: 61 HPCFHPDGKP--APTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
HPC H + P A + ++ +SI I+ + + VRP++++Y+AIDGV PRAK+NQQR R
Sbjct: 38 HPCCHDEHDPSVALRTQEEKLRSICLAIETLVVTVRPQRVIYIAIDGVVPRAKLNQQRAR 97
Query: 119 RF 120
R+
Sbjct: 98 RY 99
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 71/146 (48%), Gaps = 20/146 (13%)
Query: 129 AEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQARLN---- 184
++ E+ + G+ +A P DSN I+PGT FM ++ A++ +I+ +L
Sbjct: 191 SQGEKGACCAAAAQIGRQPAAAASPAKFDSNCISPGTAFMDAVATAVRDYIRRKLAPKES 250
Query: 185 ----------------QIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRH 228
W V+ SD+N GEGEHKI ++R Q PGF+ + H
Sbjct: 251 DGGGEAVAEAGASPAATCAHWAGLTVVFSDSNTAGEGEHKIFDFLRTQSAFPGFNGSGCH 310
Query: 229 CLYGLDADLIMLSLATHEIHFSILRE 254
+ GLDADLI LSL+ H ILR+
Sbjct: 311 VIAGLDADLIFLSLSLHIPRVVILRD 336
>gi|402589808|gb|EJW83739.1| hypothetical protein WUBG_05350 [Wuchereria bancrofti]
Length = 1134
Score = 102 bits (253), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 50/115 (43%), Positives = 70/115 (60%), Gaps = 8/115 (6%)
Query: 515 LSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMN 574
+++E+ F L EPF+PF+QL+ LPAAS++ LP YR LM D SPI FYP F D+N
Sbjct: 24 FAEMEMNFDLNEPFKPFEQLLAVLPAASANCLPPPYRELMNDAKSPIIDFYPEQFDTDLN 83
Query: 575 GKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLYVHPQHPLY 629
GK+ W+ V+ +PFI+E LL+ + LT+E+ RN VH H L+
Sbjct: 84 GKKNDWEAVILIPFINEDRLLQAVAIKDSLLTDEDRQRN--------VHGPHLLF 130
>gi|367037641|ref|XP_003649201.1| hypothetical protein THITE_40223, partial [Thielavia terrestris
NRRL 8126]
gi|346996462|gb|AEO62865.1| hypothetical protein THITE_40223, partial [Thielavia terrestris
NRRL 8126]
Length = 120
Score = 100 bits (250), Expect = 2e-18, Method: Composition-based stats.
Identities = 56/111 (50%), Positives = 71/111 (63%), Gaps = 12/111 (10%)
Query: 54 LDMNGIIHPCFHPDGKPA--PTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAK 111
LDMNGIIH C H D S +++F +IF+YI+H+F ++P+KL ++A+DGVAPRAK
Sbjct: 1 LDMNGIIHNCTHKDSDDVHFRLSEEEMFIAIFNYIEHLFGKIKPKKLFFMAVDGVAPRAK 60
Query: 112 MNQQRTRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVIT 162
MNQQR RRFR A DA ER R++ GK L K E DSN IT
Sbjct: 61 MNQQRARRFRTALDA-------ERAREKAIREGKELP---KEEPFDSNCIT 101
>gi|125557787|gb|EAZ03323.1| hypothetical protein OsI_25466 [Oryza sativa Indica Group]
Length = 205
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/178 (38%), Positives = 95/178 (53%), Gaps = 17/178 (9%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGV AFYRWLADRYP ++ D VEE+P G PVD+ +PNPNG++F NLYLDMNGII
Sbjct: 1 MGVLAFYRWLADRYPQTVSDAVEEEPVELEPGSFVPVDLRRPNPNGLKFYNLYLDMNGII 60
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDH-IFLLVRPRKLLYLAIDGVAPRAKMNQQRTRR 119
HPCFHP+G SY + S+F + I + P I +P A + R
Sbjct: 61 HPCFHPEGH--ARSYSPI-PSVFSSSNQPILCSISP------WIWTPSPAAGTDHLR--- 108
Query: 120 FRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQY 177
R A ++E + + F++A KLL K E N++ P + ++ A +
Sbjct: 109 -RGAALKGNFVEQDECVARNFKQAAKLLGLDSKLE---KNLLIPFREIKVMILAQFSW 162
>gi|71407725|ref|XP_806311.1| 5'-3' exonuclease XRNB [Trypanosoma cruzi strain CL Brener]
gi|70870021|gb|EAN84460.1| 5'-3' exonuclease XRNB, putative [Trypanosoma cruzi]
Length = 979
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 91/357 (25%), Positives = 150/357 (42%), Gaps = 62/357 (17%)
Query: 330 ERIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDR 389
+++DDF+ + +GNDFLP +P E ++ L+ +Y G + E+ L +
Sbjct: 470 SKVIDDFIVMGMLMGNDFLPRLPGAFCGESVMDNLLELYVSNVLPYGFLTSGYHEIYLPQ 529
Query: 390 VEKFIQSVAVYEDQIFQKRTRIQQAYEYNEAMKLNARRESSEELLQAPVAVADTVKLGEP 449
+++ ++S A E F++ EA E L +P+ +
Sbjct: 530 LQRLLRSYAKIETVKFRRFALSNNKMTPKEAA----------EPLYSPL---------DE 570
Query: 450 GYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQD--VCSWQWFYPYHYAP 507
+++ Y N EE K KYVEGL +V RYY + CSW W+YP+H+AP
Sbjct: 571 QWRQTYLTSTGLTGNLEEACK-------KYVEGLRFVWRYYSGNASTCSWSWYYPFHHAP 623
Query: 508 FASDLKD-LSDLEITFFLGEPFRP-----FDQLMGTLPAASSSALPEKYRNLMTDPSSPI 561
FA D+ D L ++T P F QL+ LP S + LP ++M +P +
Sbjct: 624 FALDIADYLQRCDLTNLPSPPLETTPPDMFLQLLCILPPTSHALLPAVLGDVMLNPPEEL 683
Query: 562 YKFYPPDFQIDMN---GKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLD 618
+ +P +++D GK + + V LPF + L + + T+EE R
Sbjct: 684 RETFPSMWRVDYTAAYGKDYLAE--VLLPFANVSELRELVESSRPYFTKEEQERG----- 736
Query: 619 LLYVHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVNAS--GGMNGYIWLCERNGLR 673
+Q+ YH + +EI+ N + IW +R GLR
Sbjct: 737 -----------RQVN-----YHLVLGSRASGFEINGNICELNANDAAIWDLQREGLR 777
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 47/99 (47%), Positives = 64/99 (64%), Gaps = 1/99 (1%)
Query: 157 DSNVITPGTQFMAVLSAALQYFIQARL-NQIPGWQFTKVILSDANVPGEGEHKIMSYIRL 215
DSN I+PGT FM ++ A+ +Q +L N P W +V+ S AN PGEGEHKI+ ++R
Sbjct: 205 DSNCISPGTAFMVKVTNAILTMVQDKLTNGDPLWAGLRVVFSGANTPGEGEHKIVDFLRT 264
Query: 216 QRNLPGFDPNTRHCLYGLDADLIMLSLATHEIHFSILRE 254
Q + PGF+ H + GLDADLI LSL+ H H +LR+
Sbjct: 265 QSSYPGFNGKGAHVIAGLDADLIFLSLSLHIPHILLLRD 303
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 65/122 (53%), Gaps = 25/122 (20%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP F WL +YP + DV+ P DV LY+D+NG+I
Sbjct: 1 MGVPKFASWLTKKYPEMVSDVI-------------PADVH----------GLYIDLNGLI 37
Query: 61 HPCFHPDGKPAPTSY--DDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
HPC H + P+ + ++ + I ++ + VRP +LY+A DGVAPRAKMNQQR R
Sbjct: 38 HPCCHSERDPSVAARPEEEKLQCICCEVEVLLATVRPHDILYIATDGVAPRAKMNQQRAR 97
Query: 119 RF 120
R+
Sbjct: 98 RY 99
>gi|157867636|ref|XP_001682372.1| putative 5'-3' exonuclease [Leishmania major strain Friedlin]
gi|68125825|emb|CAJ03874.1| putative 5'-3' exonuclease [Leishmania major strain Friedlin]
Length = 1164
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 90/311 (28%), Positives = 132/311 (42%), Gaps = 38/311 (12%)
Query: 321 PNPPF----PINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHVYRREFTAMG 376
P PPF + +I+DDF+ L +GNDFLPH+P++ E A++ LM VY R G
Sbjct: 553 PLPPFHPCTSTSNSKIIDDFIALGVLLGNDFLPHLPSVYCGESAMDTLMDVYVRAVLPYG 612
Query: 377 GYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYEYNEAMKLNARRESSEELLQA 436
YLT GE + ++ A + R +Q + AM L+ ++ EL A
Sbjct: 613 -YLT-GGEYDIQLLQLERLLRAYAAVEA----ARFRQFAIQSGAMTLH--DAATPELCSA 664
Query: 437 PVAVADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDV-- 494
AD R + D + + + + YVEG+ +V RYY
Sbjct: 665 ----AD----------RRCWRDVYVRTTSLRDEAGAQAACRSYVEGMRFVWRYYSSISLQ 710
Query: 495 CSWQWFYPYHYAPFASDLKDL---------SDLEITFFLGEPFRPFDQLMGTLPAASSSA 545
SW W+YP+H+AP A D+ D + L +P PF QL+ LP S
Sbjct: 711 VSWAWYYPFHHAPLALDIADFLRAQGPQVQTTLAAPKLEWQPPSPFCQLLCILPPPSRQL 770
Query: 546 LPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGV-VKLPFIDEKLLLRQTKKLEVF 604
+P+ R M P + + +P + +D G V V LPF D L
Sbjct: 771 VPDALRATMASPPAELADTFPHRWVVDRTGAYGKDHLVTVLLPFADVLRLQELVAAASGT 830
Query: 605 LTEEELFRNSV 615
TE E RN++
Sbjct: 831 YTEAEQQRNAL 841
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 67/122 (54%), Gaps = 25/122 (20%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP F WLA +YP ++D D LY+D+NG+I
Sbjct: 1 MGVPKFAAWLARKYPSMVMDSCPGD-----------------------VHGLYIDLNGLI 37
Query: 61 HPCFHPDGKP--APTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
HPC H + P A + ++ +SI I+ + + VRP++++Y+AIDGV PRAKMNQQR R
Sbjct: 38 HPCCHDEHDPSVALRTQEEKLRSICLAIETLVVTVRPQRVIYIAIDGVVPRAKMNQQRAR 97
Query: 119 RF 120
R+
Sbjct: 98 RY 99
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 69/136 (50%), Gaps = 23/136 (16%)
Query: 142 EAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQARL----NQIPG--------- 188
+ G+ +A P DSN I+PGT FM ++ A++ +I+ +L N G
Sbjct: 203 QVGRQPAAAASPAKFDSNCISPGTAFMDAVATAVRDYIRRKLAPKENDAGGKAEAEAGAS 262
Query: 189 ----------WQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
W VI SD+N GEGEHKI ++R Q PGF+ + H + GLDADLI
Sbjct: 263 PAAITATCAHWAGLTVIFSDSNTAGEGEHKISDFLRTQSAFPGFNGSGCHVIAGLDADLI 322
Query: 239 MLSLATHEIHFSILRE 254
LSL+ H ILR+
Sbjct: 323 FLSLSLHIPRVVILRD 338
>gi|260944868|ref|XP_002616732.1| hypothetical protein CLUG_03973 [Clavispora lusitaniae ATCC 42720]
gi|238850381|gb|EEQ39845.1| hypothetical protein CLUG_03973 [Clavispora lusitaniae ATCC 42720]
Length = 373
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/114 (43%), Positives = 69/114 (60%), Gaps = 12/114 (10%)
Query: 426 RRESSEELLQAPVA-------VADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLK 478
+ ESS+ + QA A D V+ E GY++RYY KF S+PEE+ ++K VV
Sbjct: 263 KTESSDSIKQADSAEPPSRKRALDDVRYLEAGYRDRYYEAKFGASSPEEVADIRKKVVRA 322
Query: 479 YVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDLKDLSDLEITFFLGEPFRPFD 532
Y+EG+ WV YYYQ SWQW++PYHYAPFA+D +L ++ +GE FD
Sbjct: 323 YLEGISWVLLYYYQGCPSWQWYFPYHYAPFAADFTNLREI-----VGEEGIKFD 371
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 61/95 (64%)
Query: 328 NFERIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLL 387
ER +DD+VF+CFFVGNDFLPH P+L +R+ I++L+ +++ + Y+T G++
Sbjct: 37 TLERAIDDWVFMCFFVGNDFLPHFPSLSVRDNGIDILVGCWKQVIPRLRDYITCDGKLNY 96
Query: 388 DRVEKFIQSVAVYEDQIFQKRTRIQQAYEYNEAMK 422
+ VE+ + +A ED+I +KR ++ Y NE +
Sbjct: 97 EGVEQLLAVLATKEDEILRKRHESERRYANNEKRR 131
>gi|449017059|dbj|BAM80461.1| hypothetical protein, conserved [Cyanidioschyzon merolae strain
10D]
Length = 695
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 117/251 (46%), Gaps = 52/251 (20%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MG+ F RW + +P ++V V E S P FD++ D+N +I
Sbjct: 1 MGIAGFQRWYLENFPSTVVTVTGE---------------SAPE----HFDHVLFDLNQLI 41
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
H + D F +F ++D+I L P+K +++A DG AP AK+ Q+ RR
Sbjct: 42 HLAAR-----VARNRDQFFIRLFRWLDNILRLCVPKKSVFIAFDGPAPLAKLVTQKRRRV 96
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNV--ITPGTQFMAVLSAALQYF 178
E+ KL +++ C +V ++PGT+ M + A++++
Sbjct: 97 L--------------------ESRKLHRTRKRKRRCGVDVLSLSPGTELMQLTLQAVEFY 136
Query: 179 IQARL-NQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADL 237
+ +RL ++ +Q + ++S VPGEGE KI+ YI DP + G DADL
Sbjct: 137 VCSRLQSKRHLYQNVRFVVSGPTVPGEGEIKIIDYIHRY-----VDPQHSVVVIGSDADL 191
Query: 238 IMLSLATHEIH 248
++L LAT ++
Sbjct: 192 VVLGLATQKVR 202
>gi|71425179|ref|XP_813034.1| 5'-3' exonuclease XRNB [Trypanosoma cruzi strain CL Brener]
gi|70877881|gb|EAN91183.1| 5'-3' exonuclease XRNB, putative [Trypanosoma cruzi]
Length = 1068
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 92/357 (25%), Positives = 150/357 (42%), Gaps = 62/357 (17%)
Query: 330 ERIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDR 389
+++DDF+ + +GNDFLP +P E ++ L+ +Y G + E+ L +
Sbjct: 559 SKVIDDFIVMGMLMGNDFLPRLPGAFCGESVMDNLLELYVSNVLPYGFLTSGYHEIYLPQ 618
Query: 390 VEKFIQSVAVYEDQIFQKRTRIQQAYEYNEAMKLNARRESSEELLQAPVAVADTVKLGEP 449
+++ ++S A E F++ + EA E L +P+ +
Sbjct: 619 LQRLLRSYAKIETVKFRRFALSNKKMTPKEA----------AEPLYSPL---------DE 659
Query: 450 GYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQD--VCSWQWFYPYHYAP 507
+++ Y N EE K KYVEGL +V RYY + CSW W YP+H+AP
Sbjct: 660 QWRQTYLTSTGLTGNLEEACK-------KYVEGLRFVWRYYSGNASTCSWSWHYPFHHAP 712
Query: 508 FASDLK------DLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPI 561
FA D+ DL++L P F QL+ LP S + LP ++M +P +
Sbjct: 713 FALDIADYLQRCDLTNLPPPPLETTPPDMFLQLLCILPPTSHALLPAVLGDVMLNPPEEL 772
Query: 562 YKFYPPDFQIDMN---GKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLD 618
+ +P +++D GK + + V LPF + L + + T+EE R
Sbjct: 773 RETFPSMWRVDYTAAYGKDYLAE--VLLPFANVSALREVVESSRPYFTKEEQERG----- 825
Query: 619 LLYVHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVNAS--GGMNGYIWLCERNGLR 673
+QI YH + +EI+ N + IW +R GLR
Sbjct: 826 -----------RQIN-----YHLVLGSRTSGFEINGNICELNANDAAIWDLQREGLR 866
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 47/99 (47%), Positives = 64/99 (64%), Gaps = 1/99 (1%)
Query: 157 DSNVITPGTQFMAVLSAALQYFIQARL-NQIPGWQFTKVILSDANVPGEGEHKIMSYIRL 215
DSN I+PGT FM ++ A+ +Q +L N P W +V+ S AN PGEGEHKI+ ++R
Sbjct: 294 DSNCISPGTAFMVKVTNAILTMVQDKLANGDPLWAGLRVVFSGANTPGEGEHKIVDFLRT 353
Query: 216 QRNLPGFDPNTRHCLYGLDADLIMLSLATHEIHFSILRE 254
Q + PGF+ H + GLDADLI LSL+ H H +LR+
Sbjct: 354 QSSYPGFNGKGAHVIAGLDADLIFLSLSLHIPHILLLRD 392
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 66/124 (53%), Gaps = 25/124 (20%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP F WL +YP + DV+ P DV LY+D+NG+I
Sbjct: 90 MGVPKFASWLTKKYPEMVSDVI-------------PADVH----------GLYIDLNGLI 126
Query: 61 HPCFHPDGKPAPTSY--DDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
HPC H + P+ + ++ + I ++ + VRP +LY+A DGVAPRAKMNQQR R
Sbjct: 127 HPCCHSERDPSVAARPEEEKLQCICFKVEVLLATVRPHDILYIATDGVAPRAKMNQQRAR 186
Query: 119 RFRA 122
R+ +
Sbjct: 187 RYMS 190
>gi|407400385|gb|EKF28636.1| 5'-3' exonuclease XRNB, putative,exoribonuclease 2, putative,
partial [Trypanosoma cruzi marinkellei]
Length = 1026
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 91/357 (25%), Positives = 151/357 (42%), Gaps = 62/357 (17%)
Query: 330 ERIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDR 389
+++DDF+ + +GNDFLP +P E ++ L+ +Y G + E+ L +
Sbjct: 517 SKVIDDFIVMGMLMGNDFLPRLPGAFCGESVMDNLLELYVSHVLPYGFLTSGYHEIYLPQ 576
Query: 390 VEKFIQSVAVYEDQIFQKRTRIQQAYEYNEAMKLNARRESSEELLQAPVAVADTVKLGEP 449
+++ ++S A E F++ + EA E L +P+ +
Sbjct: 577 LQRLLRSYAKIETVKFRRFAVSNKKMTPKEAA----------EPLYSPL---------DE 617
Query: 450 GYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQD--VCSWQWFYPYHYAP 507
++E Y N EE K KYVEGL +V RYY + CSW W+YP+H+AP
Sbjct: 618 QWREPYLTSTGLAGNLEEACK-------KYVEGLRFVWRYYSGNASTCSWSWYYPFHHAP 670
Query: 508 FASDLK------DLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPI 561
FA D+ DL++L P F QL+ LP S + LP ++M +P +
Sbjct: 671 FALDIADYLQRCDLTNLPPPPLETTPPDMFLQLLCILPPTSHALLPAVLGDVMLNPPEGL 730
Query: 562 YKFYPPDFQIDMN---GKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLD 618
+ +P +++D GK + + V LPF + L + + T++E R
Sbjct: 731 RETFPSMWRVDYTAAYGKDYLAE--VLLPFANVSELCELVESSRPYFTKDEQERG----- 783
Query: 619 LLYVHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVNAS--GGMNGYIWLCERNGLR 673
+Q+ YH + +EI+ N + IW +R GLR
Sbjct: 784 -----------RQVN-----YHLVLGTRASGFEINGNICELSANDAAIWDLQREGLR 824
Score = 95.5 bits (236), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 46/99 (46%), Positives = 65/99 (65%), Gaps = 1/99 (1%)
Query: 157 DSNVITPGTQFMAVLSAALQYFIQARL-NQIPGWQFTKVILSDANVPGEGEHKIMSYIRL 215
DS+ I+PGT FMA ++ A+ +Q +L N P W +V+ S A+ PGEGEHKI+ ++R
Sbjct: 252 DSSCISPGTAFMAKVTNAILTLVQDKLANGEPLWAGLRVVFSGASTPGEGEHKIIDFLRT 311
Query: 216 QRNLPGFDPNTRHCLYGLDADLIMLSLATHEIHFSILRE 254
Q + PGF+ H + GLDADL+ LSL+ H H ILR+
Sbjct: 312 QSSYPGFNGKGAHVIVGLDADLVFLSLSLHIPHIFILRD 350
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/143 (37%), Positives = 73/143 (51%), Gaps = 26/143 (18%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP F WL +YP + DV+ P DV LY+D+NG+I
Sbjct: 48 MGVPKFALWLTKKYPEMVSDVI-------------PADVH----------GLYIDLNGLI 84
Query: 61 HPCFHPDGKPAPTSY--DDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
HPC H + P+ + ++ + I ++ + VRP +LY+A DGVAPRAKMNQQR R
Sbjct: 85 HPCCHSERDPSVAARPEEEKLQCICSEVEVLLATVRPHDILYIATDGVAPRAKMNQQRAR 144
Query: 119 RF-RAAKDAAEAEAEEERLRKEF 140
R+ AK A E + +EF
Sbjct: 145 RYMNRAKIMTSGAAIVEEVVREF 167
>gi|70929849|ref|XP_736923.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56511875|emb|CAH76238.1| conserved hypothetical protein [Plasmodium chabaudi chabaudi]
Length = 279
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 101/206 (49%), Gaps = 42/206 (20%)
Query: 302 YQFLNIWVLREYLQYELDI--------PNPPFPINFERIVDDFVFLCFFVGNDFLPHMPT 353
++ L+I+ LR ++ ++ N F IN R++DD VFL F VGNDFLPH+P
Sbjct: 108 FEILDIYKLRSSIKTQIATYINKLKKEKNIIFSIN--RVIDDIVFLSFLVGNDFLPHIPN 165
Query: 354 LEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQ 413
++I EG++N +++ Y Y+T +V ++R++ ++ ++ E Q F+KR +
Sbjct: 166 IDINEGSMNEILNSYIFYIYKYSNYITYKDKVHIERLKIILKILSGQEFQYFKKRGVNEN 225
Query: 414 AYEYNEAMKLNARRESSEELLQAPVAVADTVKLGEPGYKERYYADKFEISNPEEIDKVKK 473
E+ + E YK YY KF +S+P++I ++
Sbjct: 226 IPEFTD----------------------------EQKYKSYYYFHKFGVSDPKQIQQI-- 255
Query: 474 DVVLKYVEGLCWVCRYYYQDVCSWQW 499
V KY+EGL W YY+ SW W
Sbjct: 256 --VKKYIEGLFWNLHYYHFGCASWHW 279
>gi|145552344|ref|XP_001461848.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124429684|emb|CAK94475.1| unnamed protein product [Paramecium tetraurelia]
Length = 920
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 90/159 (56%), Gaps = 16/159 (10%)
Query: 452 KERYYADKFEISNPEEIDKVK-KDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFAS 510
++ YY K +I+ EE+D K +D+ + Y+EG+ +V +YY++ V SW+W+Y Y+YAP
Sbjct: 25 RKLYYKAKCQITQGEELDLQKLEDMCINYMEGIYFVLQYYFKGVPSWEWYYHYYYAPLCG 84
Query: 511 DL--------KDLSDLE--ITFFLGEPFRPFDQLM-GTLPAASSSALPEKYRNLMTDPSS 559
D+ + LSD E I F +P+ PF QL+ L ++ LPE Y L+TD +
Sbjct: 85 DIVGVVSQIVQQLSDQEQPIIFTKDKPYPPFKQLLPSILTPENAMLLPEPYGKLLTDKEN 144
Query: 560 PIYK----FYPPDFQIDMNGKRFAWQGVVKLPFIDEKLL 594
I + +YP F+ D G + Q + K+PF+D L+
Sbjct: 145 SILRTPIDYYPESFETDSYGTMYEHQHITKIPFLDCNLV 183
>gi|146083592|ref|XP_001464783.1| putative 5'-3' exonuclease [Leishmania infantum JPCM5]
gi|134068877|emb|CAM59811.1| putative 5'-3' exonuclease [Leishmania infantum JPCM5]
Length = 1158
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 130/300 (43%), Gaps = 38/300 (12%)
Query: 330 ERIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHVYRREFTAMGGYLTDAGE--VLL 387
+I+DDF+ L +GNDFLPH+P++ E A++ LM VY R G YLT GE + L
Sbjct: 560 SKIIDDFIVLGVLLGNDFLPHLPSVYCGESAMDTLMDVYVRAVLPYG-YLT-GGEYDIRL 617
Query: 388 DRVEKFIQSVAVYEDQIFQKRTRIQQAYEYNEAMKLNARRESSEELLQAPVAVADTVKLG 447
++E+ +++ A E F++ A + ++A ++ EL A
Sbjct: 618 LQLERLLRAYAAVEAACFRQFAIQSGAMKPHDA--------ATPELCSA----------- 658
Query: 448 EPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDV--CSWQWFYPYHY 505
R + D + + + + YVEG+ +V RYY SW W+YP+H+
Sbjct: 659 ---EDRRCWRDVYLRTTSLRDEAGSQAACRSYVEGMRFVWRYYSSISLQVSWAWYYPFHH 715
Query: 506 APFASDLKDL---------SDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTD 556
AP A D+ D + L +P PF QL+ LP S +P+ R M
Sbjct: 716 APLALDIADFLRAQGPQVQTTLAAPKLEWQPPSPFCQLLCILPPPSRQLVPDALRATMAS 775
Query: 557 PSSPIYKFYPPDFQIDMNGKRFAWQ-GVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSV 615
P + + +P + +D G V LPF + L TE E RN++
Sbjct: 776 PPAELADTFPHRWVVDRTGAYGKDHLATVLLPFANVSRLQELVAAASGTYTEAEQQRNAL 835
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 70/136 (51%), Gaps = 23/136 (16%)
Query: 142 EAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQARL----NQIPG--------- 188
+ G+ +A P DSN I+PGT FM ++AA++ +I+ +L N G
Sbjct: 203 QVGRQPAAAASPAKFDSNCISPGTAFMDAVAAAVRDYIRHKLAPKKNDDGGKAEAEAGAS 262
Query: 189 ----------WQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
W VI SD+N GEGEHKI ++R Q PGF+ + H + GLDADLI
Sbjct: 263 PAAINATCAHWAGLTVIFSDSNTAGEGEHKIFDFLRTQSAFPGFNGSGCHVIAGLDADLI 322
Query: 239 MLSLATHEIHFSILRE 254
LSL+ H ILR+
Sbjct: 323 FLSLSLHIPRVVILRD 338
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 67/122 (54%), Gaps = 25/122 (20%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP F WL +YP ++D P DV LY+D+NG+I
Sbjct: 1 MGVPKFAAWLTRKYPSMVMDSC-------------PGDV----------HGLYIDLNGLI 37
Query: 61 HPCFHPDGKP--APTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
HPC H + P A + ++ +SI I+ + + VRP+ ++Y+A+DGV PRAKMNQQR R
Sbjct: 38 HPCCHDEHDPSVALRTQEEKLRSICLAIETLVVTVRPQHVIYIAVDGVVPRAKMNQQRAR 97
Query: 119 RF 120
R+
Sbjct: 98 RY 99
>gi|407838780|gb|EKG00159.1| 5'-3' exonuclease XRNB, putative,exoribonuclease 2, putative
[Trypanosoma cruzi]
Length = 1070
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 91/357 (25%), Positives = 148/357 (41%), Gaps = 62/357 (17%)
Query: 330 ERIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDR 389
+++DDF+ + +GNDFLP +P E ++ L+ +Y G + E+ L +
Sbjct: 561 SKVIDDFIVMGMLMGNDFLPRLPGAFCGESVMDNLLELYVSNVLPYGFLTSGYHEIYLPQ 620
Query: 390 VEKFIQSVAVYEDQIFQKRTRIQQAYEYNEAMKLNARRESSEELLQAPVAVADTVKLGEP 449
+++ ++S A E F++ EA L +P+ +
Sbjct: 621 LQRLLRSYAKIETVKFRRFALSNNKMTPKEAAGP----------LYSPL---------DE 661
Query: 450 GYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQD--VCSWQWFYPYHYAP 507
+++ Y N EE K KYVEGL +V RYY + CSW W YP+H+AP
Sbjct: 662 QWRQTYLTSTGLTGNLEEACK-------KYVEGLRFVWRYYSGNASTCSWSWHYPFHHAP 714
Query: 508 FASDLK------DLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPI 561
FA D+ DL++L P F QL+ LP S + LP ++M +P +
Sbjct: 715 FALDIADYLQRCDLTNLPPPPLETTPPDMFLQLLCILPPTSHALLPAVLGDVMLNPPEEL 774
Query: 562 YKFYPPDFQIDMN---GKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLD 618
+ +P +++D GK + + V LPF + L + + T+EE R
Sbjct: 775 RETFPSMWRVDYTAAYGKDYLAE--VLLPFANVSELRELVESSRPYFTKEEQERG----- 827
Query: 619 LLYVHPQHPLYQQITLYCQLYHQLPPQDRFAWEIDVNAS--GGMNGYIWLCERNGLR 673
+QI YH + +EI+ N + IW +R GLR
Sbjct: 828 -----------RQIN-----YHLVLGSQASGFEINGNICELNANDAAIWDLQREGLR 868
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/99 (46%), Positives = 62/99 (62%), Gaps = 1/99 (1%)
Query: 157 DSNVITPGTQFMAVLSAALQYFIQARL-NQIPGWQFTKVILSDANVPGEGEHKIMSYIRL 215
DSN I+PGT FM + A+ +Q +L N P W +V+ S AN PGEGEHKI+ ++R
Sbjct: 296 DSNCISPGTAFMVKVKNAILTMVQDKLANGDPLWAGLRVVFSGANTPGEGEHKIIDFLRT 355
Query: 216 QRNLPGFDPNTRHCLYGLDADLIMLSLATHEIHFSILRE 254
Q + PGF+ H + GLDADLI L L+ H H +LR+
Sbjct: 356 QSSYPGFNGKGAHVIAGLDADLIFLLLSLHIPHILLLRD 394
Score = 89.0 bits (219), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 67/124 (54%), Gaps = 25/124 (20%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP F WL +YP + DV+ P DV LY+D+NG+I
Sbjct: 92 MGVPKFASWLTKKYPEMVSDVI-------------PADVH----------GLYIDLNGLI 128
Query: 61 HPCFHPDGKPAPTSY--DDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
HPC H + P+ + ++ + I ++ + +VRP +LY+A DGVAPRAKMNQQR R
Sbjct: 129 HPCCHSERDPSVAARPEEEKLQCICCEVEVLLAIVRPHDILYIATDGVAPRAKMNQQRAR 188
Query: 119 RFRA 122
R+ +
Sbjct: 189 RYMS 192
>gi|71656489|ref|XP_816791.1| 5'-3' exonuclease XRNC [Trypanosoma cruzi strain CL Brener]
gi|70881942|gb|EAN94940.1| 5'-3' exonuclease XRNC, putative [Trypanosoma cruzi]
Length = 282
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 95/343 (27%), Positives = 136/343 (39%), Gaps = 86/343 (25%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP WL R+ + S P D LY+D+NG++
Sbjct: 1 MGVPLLLTWLKRRFAPCFLS-------------------SSSCPAA---DCLYIDVNGLV 38
Query: 61 HPCFHPDGKPAPTSYD---DVFKSIFDYIDHIFL-LVRPRKLLYLAIDGVAPRAKMNQQR 116
+ ++ D + + +FD ID I L LVRPR L+YLA+DG++P K+ QQR
Sbjct: 39 YQAAALATASEASAVDIDAAILRKLFDIIDDIVLRLVRPRFLVYLAVDGISPMGKLAQQR 98
Query: 117 TRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQ 176
+RR R + + E DSN I+ GT FM+ L+ AL
Sbjct: 99 SRRRRRSGGGSRGRNAVE---------------------WDSNSISVGTPFMSRLTEALH 137
Query: 177 YFIQARLNQIPGWQF---------------------TKVILSDANVPGEGEHKIMSYIRL 215
++ +R +I G + I+ D PGEGE KI IR
Sbjct: 138 FYCASRAERINGERLRDELQQVARGNTTGGDVPVTPITFIVDDVWRPGEGESKIADAIRR 197
Query: 216 QRNLPGFDPNTRHCLYGLDADLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLA 275
R+ +DPNT H + D D+ + SL HE +LR + C H
Sbjct: 198 FRSQSTYDPNTSHVICSSDTDVTVCSLILHEPRIHVLR------------YECSPSHHSG 245
Query: 276 AECHGKPGDNPADWNGVDDTPIHKKKYQFLNIWVLREYLQYEL 318
G GD+ + N V D F +I RE L+ +L
Sbjct: 246 GASRG--GDSGSWRNQVGDA----WASTFFSIHAFREELRNKL 282
>gi|384246301|gb|EIE19792.1| hypothetical protein COCSUDRAFT_58521 [Coccomyxa subellipsoidea
C-169]
Length = 852
Score = 92.4 bits (228), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 77/254 (30%), Positives = 108/254 (42%), Gaps = 54/254 (21%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGV F W ++P + V GV R +D+LY+DM +
Sbjct: 1 MGVKGFNTWFRKQFPGAYV------------GVKR------------HYDHLYIDMASYL 36
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
H D K + +D LV P+K + A+DG AP AK+ QR RR
Sbjct: 37 HEELR-----RANDVDHFHKLLHARLDKTLRLVEPQKSVVFALDGPAPLAKLLTQRLRRK 91
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQ 180
+ EA++E AK P S +TPGT MA++ +L Y+I
Sbjct: 92 K--------EAQKE--------------AKSGPRLLSSLGLTPGTPLMAMIQESLTYYIC 129
Query: 181 ARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
RL Q WQ LS A V GEGE KI+S RL R P H + D+D++++
Sbjct: 130 RRL-QTSAWQHLHFELSGATVKGEGEVKILS--RLLRPWADVQPEDTHVVIANDSDVVLM 186
Query: 241 SLATHEIHFSILRE 254
+L T + +L E
Sbjct: 187 ALVTPARNVFVLAE 200
>gi|402576527|gb|EJW70485.1| hypothetical protein WUBG_18607 [Wuchereria bancrofti]
Length = 81
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/79 (55%), Positives = 56/79 (70%)
Query: 82 IFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRFRAAKDAAEAEAEEERLRKEFE 141
IF+YID +F +VRPRKLLY+AIDGVAPRAKMNQQR+RRFRA+K+A E + +R E
Sbjct: 3 IFEYIDRLFAIVRPRKLLYMAIDGVAPRAKMNQQRSRRFRASKEAIEKVEQIAEIRSRLE 62
Query: 142 EAGKLLSAKEKPETCDSNV 160
G L ++KP + V
Sbjct: 63 SEGYPLPPEKKPSISTATV 81
>gi|449532153|ref|XP_004173047.1| PREDICTED: 5'-3' exoribonuclease 3-like, partial [Cucumis sativus]
Length = 249
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 52/72 (72%), Gaps = 1/72 (1%)
Query: 427 RESSEELLQAPVAVADTVKLGEPGYKERYYADKFEISNPEEIDKVKKDVVLKYVEGLCWV 486
RE S+ + + + D +KLG PG++ERYY +KF + PEE+D ++ DVVL+Y EGLCWV
Sbjct: 179 REKSD-VFNSNKSEEDKIKLGVPGWRERYYNEKFSANTPEELDDIRNDVVLRYTEGLCWV 237
Query: 487 CRYYYQDVCSWQ 498
YYY+ VCSWQ
Sbjct: 238 MHYYYEGVCSWQ 249
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 43/55 (78%)
Query: 359 GAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQ 413
GAINLL+ VY++EF A+GGYLTD + L RVE FIQ+V YED+IFQKR R+ Q
Sbjct: 1 GAINLLLAVYKKEFRALGGYLTDGSKPNLQRVEHFIQAVGSYEDKIFQKRARLHQ 55
>gi|167377817|ref|XP_001734556.1| 5'->3' exoribonuclease [Entamoeba dispar SAW760]
gi|165903893|gb|EDR29284.1| 5'->3' exoribonuclease, putative [Entamoeba dispar SAW760]
Length = 201
Score = 89.4 bits (220), Expect = 5e-15, Method: Composition-based stats.
Identities = 54/156 (34%), Positives = 86/156 (55%), Gaps = 6/156 (3%)
Query: 486 VCRYYYQDVCSWQWFYPYHYAPFASDLKDL--SDLEITFFLGEPFRPFDQLMGTLPAASS 543
V YY+ + SW+W+Y +HYAPFA D + I+F P P +QL+ LP S
Sbjct: 1 VFNYYFNKLPSWRWYYKFHYAPFALDFALYLNENDSISFSSDTPILPLEQLLSVLPPHSF 60
Query: 544 SALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEV 603
+ +P K + + P+SPI ++ F+ID+NG+ ++G+ LP ID LL LE+
Sbjct: 61 NNIPSKLAHFVLSPNSPILHYFNTSFKIDINGENKLYKGIPLLPNIDIDLLHSFVFDLEL 120
Query: 604 FLTEEELFRNSVM-LDLLYV--HPQHPLYQQI-TLY 635
L + RN ++ ++LYV + PL+ +I +LY
Sbjct: 121 SLPPSDFKRNILLPFNILYVTKNSSLPLFSKIQSLY 156
>gi|407400381|gb|EKF28633.1| 5'-3' exonuclease XRNB, putative,exoribonuclease 2, putative,
partial [Trypanosoma cruzi marinkellei]
Length = 243
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 52/143 (36%), Positives = 72/143 (50%), Gaps = 26/143 (18%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP F WL +YP + DV+ P DV LY+D+NG+I
Sbjct: 95 MGVPKFALWLTKKYPEMVSDVI-------------PADVH----------GLYIDLNGLI 131
Query: 61 HPCFHPDGKPAPTSY--DDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
HPC H + P+ + ++ + I ++ + VRP + Y+A DGVAPRAKMNQQR R
Sbjct: 132 HPCCHSERDPSVAARPEEEKLQCICSEVEVLLATVRPHDIFYIATDGVAPRAKMNQQRAR 191
Query: 119 RF-RAAKDAAEAEAEEERLRKEF 140
R+ AK A E + +EF
Sbjct: 192 RYMNRAKIMTSGAAIVEEVVREF 214
>gi|302837081|ref|XP_002950100.1| hypothetical protein VOLCADRAFT_104606 [Volvox carteri f.
nagariensis]
gi|300264573|gb|EFJ48768.1| hypothetical protein VOLCADRAFT_104606 [Volvox carteri f.
nagariensis]
Length = 1148
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 113/249 (45%), Gaps = 59/249 (23%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MG+P F W +++Y + + P+D + D+LY+D+N ++
Sbjct: 1 MGIPGFNVWFSEKYSKAYL----------------PLDK-------VRVDHLYIDLNSVL 37
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
H ++ K + + I + +P K + +A+DG AP AK+ QR RR
Sbjct: 38 HTVMR-----NARNHGHFHKLLHKRLSAILDVTQPNKSVMIAVDGPAPLAKLLTQRDRRK 92
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQ 180
+ + E ET ITPGT FM L+ +L YF
Sbjct: 93 KKGRSVDEG------------------------ETLTGVAITPGTTFMLDLTHSLTYFCC 128
Query: 181 ARLNQIPGWQFTKVI--LSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
+++ G ++ ++ LSD+NV GEGE K++ RL R +P H ++G DADLI
Sbjct: 129 TKMS---GKRYRHLLFELSDSNVMGEGEVKVLG--RLARPWHPGNPKDTHVIFGDDADLI 183
Query: 239 MLSLATHEI 247
+++L ++++
Sbjct: 184 LMALTSYKV 192
>gi|261328233|emb|CBH11210.1| 5'-3' exonuclease, putative [Trypanosoma brucei gambiense DAL972]
Length = 1036
Score = 89.0 bits (219), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 61/104 (58%), Gaps = 1/104 (0%)
Query: 157 DSNVITPGTQFMAVLSAALQYFIQARLN-QIPGWQFTKVILSDANVPGEGEHKIMSYIRL 215
DSN I+PGT FMA +S A+ + +++ P W VI S +N PGEGEHKI+ ++R
Sbjct: 227 DSNCISPGTDFMAKVSDAVLNMLNEKMSGNDPTWTRLCVIFSGSNTPGEGEHKIIDFLRT 286
Query: 216 QRNLPGFDPNTRHCLYGLDADLIMLSLATHEIHFSILREVITLP 259
Q +L F H + GLDADLI L+L+ H ILR+ P
Sbjct: 287 QSSLAQFGGKANHVIVGLDADLIFLALSLHITQVFILRDTTRNP 330
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/127 (37%), Positives = 69/127 (54%), Gaps = 27/127 (21%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP F WL ++YP V+K P+ + LY+D+NGII
Sbjct: 1 MGVPKFASWLRNKYP---------------------AIVTKNCPSSVH--GLYIDLNGII 37
Query: 61 HPCFHPDGKPAPTSY--DDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
HPC H D A ++ + I ++ + V+P++++Y+A+DGVAPRAKMNQQR R
Sbjct: 38 HPCCHNDSDTAIALLPEEEKLECICSELELLVQTVQPKEVMYIAVDGVAPRAKMNQQRAR 97
Query: 119 RF--RAA 123
R+ RAA
Sbjct: 98 RYMGRAA 104
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 123/297 (41%), Gaps = 23/297 (7%)
Query: 330 ERIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDR 389
+I+DD + L +GNDFLPH P+ E A++ L+ +Y E G E+ L +
Sbjct: 508 SKIIDDIIVLSILLGNDFLPHAPSAFSGESALDNLLELYVSEVLPYGFLTKGPHEINLPQ 567
Query: 390 VEKFIQSVAVYEDQIFQKRTRIQQAYEYNEAMKLNARRESSEELLQAPVAVADTVKLGEP 449
+++ ++ A E F++ + + N R+ S+ + V VAD
Sbjct: 568 LQRLFEAYAKIEAVKFRRFLLFKSTNKENSNSGAEFRKGSNND----NVTVADVAVALHS 623
Query: 450 GYKERY---YADKFEISNPEEIDKVKKDVVLKYVEGLCWVCR--YYYQDVCSWQWFYPYH 504
+R+ Y +SN ++ KYVEG+C+V R W W+YP++
Sbjct: 624 TIDDRWRDTYLKSTGLSNS------VQEACEKYVEGVCFVWRYYTTTTTDSDWSWYYPFY 677
Query: 505 YAPFASDL------KDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDP- 557
+AP DL ++ + + P QL+ LP S + LP +M
Sbjct: 678 HAPPVIDLAIYLKEANIKRMPLPVVKSTPPDTLVQLLSILPPTSHALLPMVLGEVMVRSP 737
Query: 558 -SSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRN 613
+ + +P + +D + V LPF D +L + LTEEE +R
Sbjct: 738 QQAELESTFPLQWNVDYHDSNVVHLATVMLPFADMDVLQQVVDAAWPQLTEEERWRT 794
>gi|194385576|dbj|BAG65165.1| unnamed protein product [Homo sapiens]
Length = 249
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 87/171 (50%), Gaps = 30/171 (17%)
Query: 239 MLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIH 298
ML L +HE HFS+LRE + G++ + VC ++T H
Sbjct: 1 MLGLTSHEAHFSLLREEVRFGGKKTQR-VCAP----------------------EETTFH 37
Query: 299 KKKYQFLNIWVLREYLQYELDI--PNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEI 356
L++ ++REY+ YE + F + ERI+DD++ + F VGNDF+PH+P L I
Sbjct: 38 -----LLHLSLMREYIDYEFSVLKEKITFKYDIERIIDDWILMGFLVGNDFIPHLPHLHI 92
Query: 357 REGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQK 407
A+ LL Y +GGY+ ++G + L R EK++ ++ ++ + F +
Sbjct: 93 NHDALPLLYGTYVTILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSE 143
>gi|398013576|ref|XP_003859980.1| 5'-3' exonuclease, putative, partial [Leishmania donovani]
gi|322498198|emb|CBZ33273.1| 5'-3' exonuclease, putative, partial [Leishmania donovani]
Length = 486
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/125 (37%), Positives = 68/125 (54%), Gaps = 25/125 (20%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP F WL +YP ++D P DV LY+D+NG+I
Sbjct: 1 MGVPKFAAWLTRKYPSMVMDSC-------------PGDV----------HGLYIDLNGLI 37
Query: 61 HPCFHPDGKP--APTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
HPC H + P A + + +SI I+ + + VRP+ ++Y+A+DGV PRAKMNQQR R
Sbjct: 38 HPCCHDEHDPSVALRTQGEKLRSICLAIETLVVTVRPQHVIYIAVDGVVPRAKMNQQRAR 97
Query: 119 RFRAA 123
R+ ++
Sbjct: 98 RYMSS 102
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 70/136 (51%), Gaps = 23/136 (16%)
Query: 142 EAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQARL----NQIPG--------- 188
+ G+ +A P DSN I+PGT FM ++AA++ +I+ +L N G
Sbjct: 203 QVGRQPAAAASPAKFDSNCISPGTAFMDAVAAAVRDYIRHKLAPKKNDDGGKAEAEAGAS 262
Query: 189 ----------WQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
W VI SD+N GEGEHKI ++R Q PGF+ + H + GLDADLI
Sbjct: 263 PAAINATCAHWAGLTVIFSDSNTAGEGEHKIFDFLRTQSAFPGFNGSGCHVIAGLDADLI 322
Query: 239 MLSLATHEIHFSILRE 254
LSL+ H ILR+
Sbjct: 323 FLSLSLHIPRVVILRD 338
>gi|355729455|gb|AES09873.1| 5'-3' exoribonuclease 1 [Mustela putorius furo]
Length = 74
Score = 87.0 bits (214), Expect = 3e-14, Method: Composition-based stats.
Identities = 38/74 (51%), Positives = 48/74 (64%)
Query: 171 LSAALQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCL 230
L L+YF+ +++ WQ + S PGEGEHKIM +IR ++ P DPNTRHCL
Sbjct: 1 LHEHLKYFVNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCL 60
Query: 231 YGLDADLIMLSLAT 244
YGLDADLIML L +
Sbjct: 61 YGLDADLIMLGLTS 74
>gi|343469292|emb|CCD17697.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 415
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 118/253 (46%), Gaps = 35/253 (13%)
Query: 310 LREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHVYR 369
++EY +Y LD P +I+DD + L +GNDFLPH P++ E A++ L+ +Y
Sbjct: 145 MKEYKEY-LDPCTSPAN---SKIIDDIIVLSMLLGNDFLPHSPSVLCGESALDNLLELYV 200
Query: 370 REFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYEYNEAMKLNARRES 429
G + + E+ L+++ + +S A E F +R ++ + ++ A
Sbjct: 201 SSVLPYGFLTSGSHEINLEQLRRLFESCATIEAVKF-RRFQLLKGTSAPVGAEVGATVNG 259
Query: 430 SEELLQAPVAVADTVK----LGEPGYKERYYADKFEISNPEEIDKVKKDVVL---KYVEG 482
+ VAD K + G+++ Y +K++V+ KYVEG
Sbjct: 260 GRIM-----TVADAAKPLHSAIDDGWRDTYLGST----------GLKENVLKACEKYVEG 304
Query: 483 LCWVCRYYYQDV--CSWQWFYPYHYAPFASDL------KDLSDLEITFFLGEPFRPFDQL 534
+ +V RYY V C W W+YP+++AP + D+ K+++ + + P + QL
Sbjct: 305 IRFVWRYYTDTVVSCDWAWYYPFYHAPLSHDVAAYLNGKNIAQITSPSVVTSPPHIYVQL 364
Query: 535 MGTLPAASSSALP 547
+ LP S + LP
Sbjct: 365 LSVLPPTSHALLP 377
>gi|402466304|gb|EJW01825.1| hypothetical protein EDEG_00349 [Edhazardia aedis USNM 41457]
Length = 1356
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 88/184 (47%), Gaps = 23/184 (12%)
Query: 225 NTRHCLYGLDADLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGD 284
N + +Y DADL L + I +++RE Q KC C + GHL +C
Sbjct: 610 NNQITVYSPDADLFFLGMTLENI--TLMRE----NQQLRKCMNCQKKGHLTNDCQN---- 659
Query: 285 NPADWNGVDDTPIHKKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVG 344
I K + F+N+ +L+ + E+ PF ERI+ D++ +CF G
Sbjct: 660 ------------ILKTLFIFVNLNLLKREIVNEI-CEKIPFKAESERIIHDYILICFLCG 706
Query: 345 NDFLPHMPTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQI 404
NDFLP + ++R AI +L + R +T G YL+ G + +F+ ++ +ED +
Sbjct: 707 NDFLPTINCFDVRFNAIEILTNNLIRFYTRFGRYLSKNGNINFKVFNQFLYYLSKHEDNL 766
Query: 405 FQKR 408
++++
Sbjct: 767 YRRK 770
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 35/58 (60%)
Query: 157 DSNVITPGTQFMAVLSAALQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIR 214
D+N ITPGT FM + + +I+ +L W+ +VI S + V GEGE KI+ +IR
Sbjct: 456 DTNAITPGTYFMEKVDKTIHNYIEEKLRNDKEWRNMRVIYSSSKVEGEGEQKILRFIR 513
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 29/47 (61%)
Query: 466 EEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSWQWFYPYHYAPFASDL 512
E ++K++K ++Y++GL W Y + +W +FYPYHY+P D
Sbjct: 893 ESLEKLRKKCAIEYLKGLQWTLNLYIKKQNNWGYFYPYHYSPLLEDF 939
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 28/37 (75%)
Query: 97 KLLYLAIDGVAPRAKMNQQRTRRFRAAKDAAEAEAEE 133
KLL+++IDGVAPRAK+NQQR RR+ + +E ++
Sbjct: 147 KLLFISIDGVAPRAKLNQQRARRYVSVAGKTNSETKD 183
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Query: 524 LGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGV 583
L P F+Q + LP S L K + + + + + +P DF+ DM K +WQ +
Sbjct: 1037 LNSPLTLFEQSIIVLPPYSKETLHTKVKQIYENNENNLM-IFPKDFKSDMFDKMLSWQSI 1095
Query: 584 VKLPFID 590
LPF+D
Sbjct: 1096 PLLPFVD 1102
>gi|342181047|emb|CCC90525.1| unnamed protein product, partial [Trypanosoma congolense IL3000]
Length = 244
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 64/122 (52%), Gaps = 25/122 (20%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP F WL ++YP +I SK P+ LY+D+NGII
Sbjct: 1 MGVPRFTSWLRNKYPATI---------------------SKGGPSTAH--GLYVDLNGII 37
Query: 61 HPCFHPD--GKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTR 118
HPC H D A ++ I +D + +V+P +LY+AIDGVAPRAKMNQQR R
Sbjct: 38 HPCCHSDFDSTIALLPEEEKLSCICSELDLLVKIVKPTDVLYIAIDGVAPRAKMNQQRAR 97
Query: 119 RF 120
R+
Sbjct: 98 RY 99
>gi|336373303|gb|EGO01641.1| hypothetical protein SERLA73DRAFT_132070 [Serpula lacrymans var.
lacrymans S7.3]
Length = 75
Score = 84.3 bits (207), Expect = 2e-13, Method: Composition-based stats.
Identities = 40/74 (54%), Positives = 55/74 (74%), Gaps = 1/74 (1%)
Query: 144 GKLLSAKEKPETC-DSNVITPGTQFMAVLSAALQYFIQARLNQIPGWQFTKVILSDANVP 202
GK +S EK + DSN ITPGT FM +L+ +L+Y++ ++N PGW+ +VI+SDA+VP
Sbjct: 2 GKTISDDEKNKVAWDSNAITPGTPFMDLLALSLRYWVVQKMNTDPGWKDLQVIISDASVP 61
Query: 203 GEGEHKIMSYIRLQ 216
GEGEHKIM +IR Q
Sbjct: 62 GEGEHKIMDFIRRQ 75
>gi|412985578|emb|CCO19024.1| predicted protein [Bathycoccus prasinos]
Length = 1002
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 95/198 (47%), Gaps = 27/198 (13%)
Query: 49 FDNLYLDMNGIIHPCFHPDGKPAPTSYDDVF-KSIFDYIDHIFLLVRPRKLLYLAIDGVA 107
FD++Y+D+N ++H H T + F K +F + I RPR + A+DG A
Sbjct: 71 FDHVYVDVNNVLHVAAHH------TKTESAFYKKLFGLLTGIIRRTRPRHSITFALDGPA 124
Query: 108 PRAKMNQQRTRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQF 167
P AK QR RR R + E E L + KL ITPG++
Sbjct: 125 PMAKTITQRRRRVRL------SSGEREPLSTDLSRMMKL-------------GITPGSRL 165
Query: 168 MAVLSAALQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTR 227
+ A++Y+I +++++ LS VPGEGE K++ ++L++ P F +T
Sbjct: 166 ALKVDRAIEYYIASKVHREDFGPDILYELSGTTVPGEGEIKLVRAMQLRQENPNFQNHT- 224
Query: 228 HCLYGLDADLIMLSLATH 245
HC+ D+D I+L+L +
Sbjct: 225 HCVVSEDSDAILLALTVN 242
>gi|298715566|emb|CBJ28119.1| 5\'->3\' exoribonuclease, putative [Ectocarpus siliculosus]
Length = 813
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 79/350 (22%), Positives = 129/350 (36%), Gaps = 107/350 (30%)
Query: 2 GVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGIIH 61
G+ F++W +P ++ D + FD++ +DMN I+H
Sbjct: 21 GINGFHKWFVQEFPTAVTDASRVE----------------------SFDHVCIDMNQILH 58
Query: 62 PCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRFR 121
D + IF ++ PRK + A DG AP AK+ QR+RR
Sbjct: 59 VAMR-----KARDEDHAIRRIFRDVNLTLKRCPPRKSVVFAFDGSAPLAKLLVQRSRR-- 111
Query: 122 AAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQA 181
E + ++ + LS PGT+FM +++A++Y+
Sbjct: 112 ----------ENSKRNSKYRMSALHLS--------------PGTKFMEDVASAMEYYAFQ 147
Query: 182 RLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIMLS 241
+ P +Q K +S ANVPGEGE K + ++ +++P P+ + G DADLI+
Sbjct: 148 ECTR-PCYQGVKFYISGANVPGEGELKCIDWL---KHMP--KPDESAVIVGGDADLILQG 201
Query: 242 LATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIHKKK 301
LA E+ + F+C Q
Sbjct: 202 LALSEV---------------KNTFICSQT--------------------------DAGS 220
Query: 302 YQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHM 351
Y+ +IW + L+ FP + D L GND+LP +
Sbjct: 221 YRLSSIWEVVRSLEAM-------FPGQSALVRIDLAVLIMLNGNDYLPKV 263
>gi|302814256|ref|XP_002988812.1| hypothetical protein SELMODRAFT_427492 [Selaginella moellendorffii]
gi|300143383|gb|EFJ10074.1| hypothetical protein SELMODRAFT_427492 [Selaginella moellendorffii]
Length = 298
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 91/380 (23%), Positives = 150/380 (39%), Gaps = 100/380 (26%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MGVP F+ WL ++P + D + DG N + +D
Sbjct: 1 MGVPGFFAWLVSKHPRCVRDAI------DG-----------AKNNILRYD---------- 33
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRR- 119
++ ++ D + + +V P KL++LA+DG P K+ + ++
Sbjct: 34 -------------TFATFYQEFLDSLRKLVAMVAPTKLVFLALDGRPPTPKLFSKLFKKP 80
Query: 120 FRAAKDAAEAEAEEERLRKEFE--EAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQY 177
R +DA+ + + + G L+ K + ++ GT FM L + L+
Sbjct: 81 CRYNRDASLSSLSSSEDELDSTKGQTGDLIPRNRKAKMA---MVRHGTPFMNRLESELRR 137
Query: 178 FIQARL---------NQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRH 228
F+ + + + + I+S + GEGE KI ++IR LP F+ + H
Sbjct: 138 FVASMMLSSSDDHRRRRSMTSSRLQWIVSTSEEDGEGELKIFNHIR---ALP-FNAHDFH 193
Query: 229 CLYGLDADLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPAD 288
C+ G DADLIML+LA S L I + Q K
Sbjct: 194 CVVGRDADLIMLALA------SPLSRKINIVRQTPK------------------------ 223
Query: 289 WNGVDDTPIHKKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFL 348
+GV Y+ ++I L + +++ P + + D VFLCF +GNDFL
Sbjct: 224 -DGV-------MIYKLISIETLVRDFEVQME---EPCSVRLRSTMRDLVFLCFLLGNDFL 272
Query: 349 PHMPTLEIREGAINLLMHVY 368
P + L IR I+ L Y
Sbjct: 273 PGLEALTIRNNGIDKLQQTY 292
>gi|350646476|emb|CCD58875.1| 5'-3' exoribonuclease, putative [Schistosoma mansoni]
Length = 1638
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 96/225 (42%), Gaps = 46/225 (20%)
Query: 216 QRNLPGFDPNTRHCLYGLDADLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLA 275
+ NL P T Y D +I L THEI+ ILRE + A
Sbjct: 47 KENLKDNSPET----YSFDPCVISPGLTTHEINICILRENVVK----------------A 86
Query: 276 AECHGKPGDNPADWNGVDDTPIHKKKYQFLNIWVLREYLQYELD--IPNPPFPINFERIV 333
C DN K + + VLREY+ E PFP + ER++
Sbjct: 87 QNCSA---DN--------------KPFCITYLSVLREYIDLEFTELKKTLPFPYDLERLI 129
Query: 334 DDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKF 393
DD+VF+ F +GNDF+PH+P L I ++ + Y+ + GYL + G + L R K+
Sbjct: 130 DDWVFMAFLLGNDFIPHIPNLHIHAESLLTVWDTYQVVLPKLDGYLVELGYLNLPRFHKY 189
Query: 394 IQSVAVYEDQIFQKRTRI-------QQAYEYNEAMKLNARRESSE 431
++ ++ +E F++R Q A NE KL E +E
Sbjct: 190 LEELSQFERDWFEEREAAFRWMRGKQGARMANELEKLGLSSEDNE 234
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 70/180 (38%), Gaps = 52/180 (28%)
Query: 451 YKERYYADKFEISNPEEIDKVKKDV---------VLKYVEGLCWVCRYYYQDVCSWQWFY 501
++ YY+ K I ++D++ D+ + Y+ L W+ YY+ +V W +FY
Sbjct: 372 HRRDYYSSKLGI----QLDEMSGDLGENSTLMSLIQDYIRMLQWILNYYFLNVADWDFFY 427
Query: 502 PYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPI 561
YHYAPF DL + F G + + N T+ S P+
Sbjct: 428 AYHYAPFVHDL---------ILYTKKFENCQNFNG---------IKLSWTNFQTN-SQPV 468
Query: 562 YKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLY 621
F +PF+D++LL+ K + LTE+E RN L Y
Sbjct: 469 LPFL--------------------IPFLDQQLLINAMKDGDTKLTEQEKQRNQHKSHLFY 508
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 41/78 (52%), Gaps = 16/78 (20%)
Query: 90 FLLV---RPRKLLYLAIDGVAPRAKMNQQRTRRFRAAKDAAEAEAEEERLRKEFEEAGKL 146
F LV +PRK +LA+DGVAPRAKM QQR RRF++ A E +E L+ E
Sbjct: 4 FTLVHTQKPRKTFFLAVDGVAPRAKMTQQRARRFQS---ALEGRIAKENLKDNSPETYSF 60
Query: 147 LSAKEKPETCDSNVITPG 164
D VI+PG
Sbjct: 61 ----------DPCVISPG 68
>gi|256077064|ref|XP_002574828.1| 5'-3' exoribonuclease [Schistosoma mansoni]
Length = 1637
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 96/225 (42%), Gaps = 46/225 (20%)
Query: 216 QRNLPGFDPNTRHCLYGLDADLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLA 275
+ NL P T Y D +I L THEI+ ILRE + A
Sbjct: 47 KENLKDNSPET----YSFDPCVISPGLTTHEINICILRENVVK----------------A 86
Query: 276 AECHGKPGDNPADWNGVDDTPIHKKKYQFLNIWVLREYLQYELD--IPNPPFPINFERIV 333
C DN K + + VLREY+ E PFP + ER++
Sbjct: 87 QNCSA---DN--------------KPFCITYLSVLREYIDLEFTELKKTLPFPYDLERLI 129
Query: 334 DDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKF 393
DD+VF+ F +GNDF+PH+P L I ++ + Y+ + GYL + G + L R K+
Sbjct: 130 DDWVFMAFLLGNDFIPHIPNLHIHAESLLTVWDTYQVVLPKLDGYLVELGYLNLPRFHKY 189
Query: 394 IQSVAVYEDQIFQKRTRI-------QQAYEYNEAMKLNARRESSE 431
++ ++ +E F++R Q A NE KL E +E
Sbjct: 190 LEELSQFERDWFEEREAAFRWMRGKQGARMANELEKLGLSSEDNE 234
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 70/180 (38%), Gaps = 53/180 (29%)
Query: 451 YKERYYADKFEISNPEEIDKVKKDV---------VLKYVEGLCWVCRYYYQDVCSWQWFY 501
++ YY+ K I ++D++ D+ + Y+ L W+ YY+ +V W +FY
Sbjct: 372 HRRDYYSSKLGI----QLDEMSGDLGENSTLMSLIQDYIRMLQWILNYYFLNVADWDFFY 427
Query: 502 PYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPI 561
YHYAPF DL + F G + + N T+ S P+
Sbjct: 428 AYHYAPFVHDL---------ILYTKKFENCQNFNG---------IKLSWTNFQTN-SQPV 468
Query: 562 YKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRNSVMLDLLY 621
+ +PF+D++LL+ K + LTE+E RN L Y
Sbjct: 469 FTL---------------------IPFLDQQLLINAMKDGDTKLTEQEKQRNQHKSHLFY 507
Score = 52.4 bits (124), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 41/78 (52%), Gaps = 16/78 (20%)
Query: 90 FLLV---RPRKLLYLAIDGVAPRAKMNQQRTRRFRAAKDAAEAEAEEERLRKEFEEAGKL 146
F LV +PRK +LA+DGVAPRAKM QQR RRF++ A E +E L+ E
Sbjct: 4 FTLVHTQKPRKTFFLAVDGVAPRAKMTQQRARRFQS---ALEGRIAKENLKDNSPETYSF 60
Query: 147 LSAKEKPETCDSNVITPG 164
D VI+PG
Sbjct: 61 ----------DPCVISPG 68
>gi|123477435|ref|XP_001321885.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121904720|gb|EAY09662.1| hypothetical protein TVAG_060380 [Trichomonas vaginalis G3]
Length = 598
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 79/354 (22%), Positives = 144/354 (40%), Gaps = 88/354 (24%)
Query: 49 FDNLYLDMNG--IIHPCFHPD-GKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDG 105
+D LY+D ++ FH D PT + + ID+ ++P L+ +A+DG
Sbjct: 29 YDCLYIDATQYVVMSKLFHDDESGEEPTKF------ALNCIDYCVHHIKPTHLICIAVDG 82
Query: 106 VAPR-AKMNQQRTRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPG 164
+ AK+N +R RRF+ + E+E E + +++A
Sbjct: 83 IGTNFAKLNSKRQRRFKR-----DNESETESVYYPYQKA--------------------- 116
Query: 165 TQFMAVLSAALQYFIQARLNQIPGWQFTKVILSDAN-VPGEGEHKIMSYIRLQRNLPGFD 223
+ F++ +L P WQ +K +L + + + E KI I NLP ++
Sbjct: 117 ----------ISDFVEEKLKTDPIWQASKYVLYGSPFMLDDSESKIFRCINYIVNLPDYN 166
Query: 224 PNTRHCLYGLDADLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPG 283
PN RH + D+DLI+ SL +H +L ++ +
Sbjct: 167 PNYRHLIITSDSDLILFSLKSHVKAIDLL---------------TNRIPRAKTDFEQFSF 211
Query: 284 DNPADWNGVDDTPIHKKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFV 343
DN + ++I ++ EY+ + D P + VDDF+ LC F+
Sbjct: 212 DNS----------------ELVSIPIIAEYIMKDFDRP--------KEYVDDFMMLCAFL 247
Query: 344 GNDFLPHMPTLEIREGAINLLMHVYRREFTAMGGYLTDAGEVLLDRVEKFIQSV 397
GN + P + +I + IN ++ +Y+R GG +T + ++ F + +
Sbjct: 248 GNVYSPTI--YKIDDLDINKIIIIYKRYLDRYGGLVTKGDTYDFNNLKLFFKLI 299
>gi|321444979|gb|EFX60557.1| hypothetical protein DAPPUDRAFT_19557 [Daphnia pulex]
Length = 74
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/74 (52%), Positives = 50/74 (67%), Gaps = 1/74 (1%)
Query: 48 EFDNLYLDMNGIIHPCFHPDG-KPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGV 106
E+DNLY+D+N I+H C A + + +F+ ID IF +VRPRKLLY+A+DGV
Sbjct: 1 EYDNLYIDLNEIVHNCVRAARFHNADDRERRIMEILFEKIDQIFSIVRPRKLLYVALDGV 60
Query: 107 APRAKMNQQRTRRF 120
APRAK QQR RRF
Sbjct: 61 APRAKRTQQRIRRF 74
>gi|170105467|ref|XP_001883946.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164641126|gb|EDR05388.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 112
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/117 (41%), Positives = 73/117 (62%), Gaps = 8/117 (6%)
Query: 1 MGVPAFYRWLADRYPLSI-VDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGI 59
MG+P F+R++++ P+ + VD E+ +V VA D+ + P + DNLYLD NGI
Sbjct: 1 MGIPKFFRYVSE-IPIDLAVDTREQHSRV--WWVA--YDLERAYPMTLLSDNLYLDFNGI 55
Query: 60 IHPCFHPDGKPAP--TSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQ 114
IH C P+ + A + + SIF Y+D +F ++ +KL ++A+DGVAPRAKMNQ
Sbjct: 56 IHNCSRPNDEDAHFRLTEEQNNTSIFTYVDRLFGKIKLKKLFFMAVDGVAPRAKMNQ 112
>gi|330791402|ref|XP_003283782.1| hypothetical protein DICPUDRAFT_18829 [Dictyostelium purpureum]
gi|325086281|gb|EGC39673.1| hypothetical protein DICPUDRAFT_18829 [Dictyostelium purpureum]
Length = 310
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 77/341 (22%), Positives = 134/341 (39%), Gaps = 82/341 (24%)
Query: 33 VARPVDVSKPNPNGMEFDNLYLDMNGIIHPCFHPDGKPAPTSYD-DVFKSIFDYIDHIFL 91
+ + ++ KP PN D++Y+D+N +H KP + + + K + +++ I
Sbjct: 10 IKKRYNLYKPLPNNFHTDHIYIDVNNYLHKTITK--KPNIQNVEINALKRLKHFLNEIIY 67
Query: 92 LVRPRKLLYLAIDGVAPRAKMNQQRTRR------------FRAAKDAAEAEAEEERLRKE 139
+ R ++ ++DG PR+KM QR RR +D E + L+ +
Sbjct: 68 STKIRHTIFFSVDGPGPRSKMTTQRERRLKNLNLHKLLYYINKNRDEETGENDINLLKHD 127
Query: 140 FEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQARLNQIPGWQFTK-VILSD 198
++ L E + TPGT FM +L + Y+ + +L F K V +S
Sbjct: 128 YD----YLEGLELNVGFSTLNFTPGTSFMGLLKSFFIYYTKNKL------SFAKNVFISA 177
Query: 199 ANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIMLSLATHEIHFSILREVITL 258
A+ GEGE KI +I N ++ N + D+D+I+ L + + IL
Sbjct: 178 ADRMGEGEWKIFQHI----NNSNYNLNDIITIASNDSDMILFCLLSKYNNIQIL------ 227
Query: 259 PGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIHKKKYQFLNIWVLREYLQYEL 318
+K+ Q L + LRE + E
Sbjct: 228 ---------------------------------------NKESNQVLYVNQLREAIYKES 248
Query: 319 DIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREG 359
IN + + DFV L F +G D LP + + +++ G
Sbjct: 249 -------GINDRQAIIDFVLLSFLMGTDHLPKVSSFKMQNG 282
>gi|146163589|ref|XP_001011880.2| hypothetical protein TTHERM_00393040 [Tetrahymena thermophila]
gi|146145991|gb|EAR91635.2| hypothetical protein TTHERM_00393040 [Tetrahymena thermophila
SB210]
Length = 974
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 70/141 (49%), Gaps = 5/141 (3%)
Query: 440 VADTVKLGEPGYKERYY--ADKFEISNPEEIDKVKKDVVLKYVEGLCWVCRYYYQDVCSW 497
+ + K GE GYK+++Y K++ S ++ ++ + KY EG+ W YY + +W
Sbjct: 504 IINNYKPGERGYKDQFYLSVGKYDQS---DLSTLRPSITQKYFEGVVWHFASYYGEYPAW 560
Query: 498 QWFYPYHYAPFASDLKDLSDLEITFFLGEPFRPFDQLMGTLPAASSSALPEKYRNLMTDP 557
W Y YH+APFA D+ LS+L+I FF P ++ + SS LP + + +
Sbjct: 561 NWEYNYHFAPFAEDMNKLSELQIKFFRQPPLTNSQYMIIMSNQSYSSKLPHELKEKIYGE 620
Query: 558 SSPIYKFYPPDFQIDMNGKRF 578
S + +P F N +F
Sbjct: 621 QSNLADLFPLSFGQGPNKTQF 641
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 75/370 (20%), Positives = 150/370 (40%), Gaps = 81/370 (21%)
Query: 76 DDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRFRAAKDAAEAEAEEER 135
+ V K+ D I H+ +P + + ++IDGV P
Sbjct: 73 EKVTKNFIDVITHL----KPSRNIIVSIDGVKP--------------------------- 101
Query: 136 LRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQARLNQIPGWQFTKVI 195
++K E +LL K+ P + + + PG Q + L ++ Q + I Q +
Sbjct: 102 IQKSKYEYVQLL--KQDPNHINYSDLYPGAQLIEELHEKIK---QVAHDFIQKHQELNFV 156
Query: 196 LSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIMLSLATHEIHFSILREV 255
+ D N+PG+ +K+ +IR Q+N F + R L + +LA H +H+ L
Sbjct: 157 ILDQNMPGDALYKLRFFIRQQKNRLHFRGDFRFALVDNSNQGFLTALALH-LHYIDL--- 212
Query: 256 ITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIHKKKYQFLNIWVLREYLQ 315
+ Q GH ++ KY +++ V ++++
Sbjct: 213 -----------IQHQQGHESS-----------------------FKYSTIDVGVFKQFII 238
Query: 316 YELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHVYRREFTAM 375
E + N NF+ I+DD + L +G++ LP + + ++ L ++Y+R + +
Sbjct: 239 SEFSLMNVQGVHNFQSIIDDLILLSLLLGSETLPKLTFFSFEKNGMDYLYYLYKRMYPFL 298
Query: 376 GGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQKRTRIQQAYEYNEAMKLNARRESSEELLQ 435
G L++ G + + F + + ED + R Q ++YN + R +S +L +
Sbjct: 299 NGNLSEKGVIYQVNLHLFFHELGMIEDILIFNEIR-QSQFQYNNS------RHNSIQLQK 351
Query: 436 APVAVADTVK 445
+ + + +K
Sbjct: 352 SVEEIIEKIK 361
>gi|380470784|emb|CCF47584.1| 5'-3' exoribonuclease, partial [Colletotrichum higginsianum]
Length = 278
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 48/70 (68%)
Query: 554 MTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFLTEEELFRN 613
MT+P+SPIY FYP DF++DMNGKR W+ VVK+PFIDEK LL + L++++ RN
Sbjct: 1 MTNPNSPIYDFYPRDFELDMNGKRMEWEAVVKIPFIDEKRLLSAMEPKNKLLSQDQKERN 60
Query: 614 SVMLDLLYVH 623
+ L + +
Sbjct: 61 GFGVALKFTY 70
>gi|156093866|ref|XP_001612971.1| 5'-3' exoribonuclease [Plasmodium vivax Sal-1]
gi|148801845|gb|EDL43244.1| 5'-3' exoribonuclease, putative [Plasmodium vivax]
Length = 975
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 96/415 (23%), Positives = 163/415 (39%), Gaps = 100/415 (24%)
Query: 2 GVPAFYRWLADRYPLSIVDVVEEDPQVD----GEGVARPVDVSK---------------- 41
G+P ++W+ +P S V VVE + +D G AR K
Sbjct: 23 GIPGLHKWVIQNFP-SCVKVVERNSLLDVTHLGGNFARGRKNKKKGGGAAGGGAGGAAGG 81
Query: 42 -------PNPNGMEFDNLYLDMNGIIHPC---FHPDGKPAPTSYDDVFKSIFDYIDHIFL 91
P G DNL DMN ++H F D + F + I ++
Sbjct: 82 GTHWKKGPTKIG-RVDNLLFDMNQLLHKANVQFVND--------EQYFCKLSYLISNVLR 132
Query: 92 LVRPRKLLYLAIDGVAPRAKMNQQRTRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKE 151
+P+K + AIDG+ P +K+ Q RR + GK L +
Sbjct: 133 KFQPQKNIVFAIDGICPFSKLKLQIKRRAK----------------------GKNLQGGD 170
Query: 152 KPETCDSNVITPGTQFMAVLSAALQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMS 211
+SN IT G+ F+ +S+ L+ F+ A L + ++ KV +S GEGE K+M+
Sbjct: 171 -----NSNDITCGSPFIQKVSSFLRNFV-AHLTSLSKYEHVKVYVSTDKEVGEGELKLMN 224
Query: 212 YIR------LQRNLPGFDPNTRHCLYGLDADLIMLSLATHEI-------HFSILREVITL 258
+++ + + G DADL++ LA + + + L +V
Sbjct: 225 WMQNYVGGGSSSLGASRKADESFVIVGADADLLLQCLALKGVQNVCVYTYQTFLVDVGAW 284
Query: 259 PGQQEKCFVCGQVGHLAAEC-HGKPGDNPADWNGVDDTPIHKKKYQFLNIWVLREYLQYE 317
++++ + G+ H+ + +GK N +G P HK + + + + Y
Sbjct: 285 GRRKKEDHLAGEGSHVGSSSPNGKATPNGESHHG--GGPTHKWRKKKIKVL-------YN 335
Query: 318 LDIPNPPFPINFERIVD----DFVFLCFFVGNDFLPHMPTLEIREGAINLLMHVY 368
L+ F + + R +D D + L GND+LP +IREG + Y
Sbjct: 336 LNTFTNLFRMKYPRAIDQIRRDMLILFILKGNDYLP-----KIREGNFSTFFEAY 385
>gi|428163037|gb|EKX32131.1| hypothetical protein GUITHDRAFT_121693 [Guillardia theta CCMP2712]
Length = 651
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 134/644 (20%), Positives = 248/644 (38%), Gaps = 149/644 (23%)
Query: 2 GVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGIIH 61
G A RWL +P ++ + P +FD++ DMN ++H
Sbjct: 18 GKAASKRWLEASFPKCVIPISPRSP-------------------SFKFDHVLFDMNDMLH 58
Query: 62 PCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRFR 121
C + S V K +F +D + P K + L DG P AK+ +Q
Sbjct: 59 TC----ARNCKNS-SAVCKRVFRQVDSYLRIFTPGKSVVLCFDGPGPIAKIPKQ------ 107
Query: 122 AAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMA-VLSAALQYFIQ 180
E+ E+R K T DS ITPGT+FM+ V + +Q
Sbjct: 108 -------VESREKR-------------TKVASSTLDSIDITPGTRFMSEVRELCFAHVVQ 147
Query: 181 ARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
+ L Q G++ LS ++V GEGE K++ +I D R G D+DL +
Sbjct: 148 S-LEQRGGYRDISFYLSCSDVAGEGELKLVEWIHTFVESASKD---RILFIGGDSDLTIQ 203
Query: 241 SLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIHKK 300
SLA L G ++ P+H
Sbjct: 204 SLA--------------LRGHSQRI-----------------------------KPMH-- 218
Query: 301 KYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGA 360
F+++ L++ L+ FP + + I D + L F GND+LP + ++
Sbjct: 219 ---FISLSELKKELE-------TIFPDHSDIIRFDLLLLIIFNGNDYLPPLKHFNLQVSF 268
Query: 361 INLLMHVYRREFTAMGGYLTDAGEVLLDR--VEKFIQSVAVYEDQIFQKRTRIQQAYEYN 418
+ + +F + +L D E D + +F++ V + ++ I + ++Y
Sbjct: 269 EVYTLMKSQEKFRSR--FLLDGREKTFDYEFLAEFLKQVDA-RLKTWKISNPIVELHQYV 325
Query: 419 EAMKLNARRESSEELLQAPVAVADTVKLGEPGYKERYYADKFE-ISNPEEIDKVKK---- 473
+ L E S E LQ + ++ +++ D + ++N + + K
Sbjct: 326 QEGSL----EYSVEDLQ--FEFSQEIREEHSASIDKHQKDFVDLLTNHRKGTSIPKRYEP 379
Query: 474 -DVVLKYVEGLCWVCRYYYQD-VCSWQWFYPYHYAPFASDLKDLSDLEITFFL------G 525
+++ +Y++G+ W + Y V +++ Y + P +S + + + ++ L
Sbjct: 380 PEMIERYLKGVLWNIKMYIDGFVPDFEFMYSFKKGPSSSSVVNWIESKVKPSLKAESSNS 439
Query: 526 EPFRPFDQLMGTLPAASSSALPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVK 585
P P + + P ++ LP +YRN++ D + ++ + K +Q +
Sbjct: 440 RPLAPAELCLAVTPVRAADRLPLQYRNILLDETCQFHRHF--------KAKDALFQPHLF 491
Query: 586 LPFIDEKLLLRQTKKLEVFLTEEELF---RNSVMLDLLYVHPQH 626
LP + ++L T+ +T+EE F NS L +V +H
Sbjct: 492 LPLLRKEL----TRIDPNLMTDEEKFIVAMNSAWTLLFHVRNRH 531
>gi|355729458|gb|AES09874.1| 5'-3' exoribonuclease 1 [Mustela putorius furo]
Length = 154
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 60/101 (59%), Gaps = 2/101 (1%)
Query: 309 VLREYLQYELDI--PNPPFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMH 366
++REY+ YE + F + ERI+DD++ + F VGNDF+PH+P L I A+ LL
Sbjct: 3 LMREYIDYEFSVLKDKISFKYDIERIIDDWILMGFLVGNDFIPHLPHLHINHDALPLLYG 62
Query: 367 VYRREFTAMGGYLTDAGEVLLDRVEKFIQSVAVYEDQIFQK 407
Y +GGY+ ++G + L R EK++ ++ ++ + F +
Sbjct: 63 TYITILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSE 103
>gi|170105585|ref|XP_001884005.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164641185|gb|EDR05447.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 350
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/129 (38%), Positives = 63/129 (48%), Gaps = 8/129 (6%)
Query: 492 QDVCSWQWFYPYHYAPFASDLK------DLSDLEITFFLGEPFRPFDQLMGTLPAASSSA 545
+ V SW WFY YHYAP S + L L I G FD G A +A
Sbjct: 143 RGVASWGWFYDYHYAPRISGVHRRLGCWTLLVLPIADLRGADEMSFDFQPGNAVEAVPAA 202
Query: 546 LPEKYRNLMTDPSSPIYKFYPPDFQIDMNGKRFAWQGVVKLPFIDEKLLLRQTKKLEVFL 605
R LM DP+SPI FYP +F D+NGK+ W+ +V FIDE+ L+ + L
Sbjct: 203 YGRVARYLMYDPNSPILDFYPLEFAQDLNGKKQDWEAIVT--FIDEERPLKAMTARDHCL 260
Query: 606 TEEELFRNS 614
T EE RN+
Sbjct: 261 TPEERKRNA 269
>gi|68071547|ref|XP_677687.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56497900|emb|CAH96123.1| conserved hypothetical protein [Plasmodium berghei]
Length = 755
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 92/437 (21%), Positives = 168/437 (38%), Gaps = 116/437 (26%)
Query: 2 GVPAFYRWLADRYPLSIVDVVEEDPQVD-----------------------GEGVARPVD 38
G+P ++W+ + +P S V +VE++ VD +G+ + ++
Sbjct: 23 GIPGLHKWVINNFP-SCVKIVEKNQLVDVDTYINKNNKIENTVNNGNDIIKNKGINKGIN 81
Query: 39 V-----SKPNPNGMEFDNLYLDMNGIIHPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLV 93
S+ N ++ DNL D+N ++H SY++ F + + I ++
Sbjct: 82 KEGNKESRYNNKILDVDNLLFDLNQLLHK-----ANVEFCSYNNYFFKLSNLIKNVLKKF 136
Query: 94 RPRKLLYLAIDGVAPRAKMNQQRTRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKP 153
P+K + AIDG+ P +K+ Q RR + +++E ++
Sbjct: 137 HPKKNVVFAIDGICPFSKLKLQIKRRAKI----------------KYKENKNII------ 174
Query: 154 ETCDSNVITPGTQFMAVLSAALQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIM--- 210
N IT G+ F+ + L F++ L + + K +S A GEGE K+M
Sbjct: 175 -----NDITCGSVFIEKIGQFLINFVKW-LASLEKYANVKFYISTAKEVGEGELKLMNWI 228
Query: 211 -SYIRLQRNL-------------PGFDPNTRH------CLYGLDADLIMLSLATHEIH-- 248
SY++ + +D + G DADL++ LA I
Sbjct: 229 TSYVKKDKKENNNDIENNELLKYSNYDKTDSKREEESFIVVGADADLLLQCLALKNIRNV 288
Query: 249 -----------------FSILREVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNG 291
F +++I G+ + + + ++ E + A N
Sbjct: 289 YIYTYQTFYLNMDNDFLFKKEKQLIDKQGKNKDEEIVNETCYVGKE-NELTNSGKAINNL 347
Query: 292 VDDTPIHKKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCFFVGNDFLPHM 351
V+ I +KK L + L ++ L+ +PI F +I D + L GND+LP
Sbjct: 348 VNIKKIARKKIMVL--YNLNIFINLFLN----KYPIFFNQIKRDLLILFILKGNDYLP-- 399
Query: 352 PTLEIREGAINLLMHVY 368
++REG N+ Y
Sbjct: 400 ---KVREGNFNVFFEAY 413
>gi|310831027|ref|YP_003969670.1| putative 5'-3' exoribonuclease [Cafeteria roenbergensis virus
BV-PW1]
gi|309386211|gb|ADO67071.1| putative 5'-3' exoribonuclease [Cafeteria roenbergensis virus
BV-PW1]
Length = 704
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 134/315 (42%), Gaps = 72/315 (22%)
Query: 77 DVFKSIFDYIDHIF---LLVRPRKLLYLAIDGVAPRAKMNQQRTRRFRAAKDAAEAEAEE 133
++ +I +Y+ H+ +L +Y+AIDGV K+ +Q+ RR+
Sbjct: 62 EILVNIKNYLKHLLYEVILTNELDTIYIAIDGVPSFGKLREQQKRRY------------- 108
Query: 134 ERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQARLNQIPGWQFTK 193
G LL + K + ITPGT+FM L+ L+ ++ + +
Sbjct: 109 ---------MGSLLKSTHKWNKSN---ITPGTKFMKHLNNYLKQVLKKLQTE---FSIKN 153
Query: 194 VILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIMLSLATH-EIHFSIL 252
+I SD+N PGEGE KI++Y+ R L N ++ D+D+++L+L E S+L
Sbjct: 154 IIFSDSNEPGEGETKIVNYL---RTLKLSKSNIPILIFSPDSDMVLLNLLIKPEFVVSLL 210
Query: 253 REVITLPGQQEKCFVCGQVGHLAAECHGKPGDNPADWNGVDDTPIHKKKYQFLNIWVLRE 312
R QQ E + K DN + Y+ + + R
Sbjct: 211 R-----FNQQ--------------ESNLKVLDNKTNV------------YEIMTMKNFRN 239
Query: 313 YLQYELDIPNPPFPINFERIVDD--FVFLCFFVGNDFLPHMPTLEIREGAINLLMHVYRR 370
YL ++ + +I+ D VF CF GNDFLP + ++ ++ + ++ +Y
Sbjct: 240 YLVNYIETKTYK-KLEERKIIRDIILVFNCF--GNDFLPKIISINLKHDFLQ-VIDLYAI 295
Query: 371 EFTAMGGYLTDAGEV 385
YL ++G++
Sbjct: 296 SLIKNNNYLIESGQI 310
>gi|123976904|ref|XP_001314674.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121897268|gb|EAY02394.1| conserved hypothetical protein [Trichomonas vaginalis G3]
Length = 212
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 101/255 (39%), Gaps = 62/255 (24%)
Query: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
MG+ F L +RYPL + + E + P N + D L + GI
Sbjct: 1 MGIYTFKGQLVNRYPLILKSLSE---------------IPYPKYNCLFIDASLLIVKGI- 44
Query: 61 HPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRAKMNQQRTRRF 120
H + + A + +F+ + H LV+P L+++A DG AK RR+
Sbjct: 45 HAGVQTELRTANA------RQLFNNVVH---LVQPTDLIFIAFDGPFSNAKQYTVLNRRY 95
Query: 121 RAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAVLSAALQYFIQ 180
P + + L+ +I+
Sbjct: 96 VYKS-------------------------------------MPIETYNQIFEDDLKSWIE 118
Query: 181 ARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
+N WQ +VI S + VPGE E KI ++R + + P +DPN RHC+ D+DLI++
Sbjct: 119 ELINFDEYWQKPRVIFSGSKVPGEAETKIFDFLRQEIHKPEWDPNKRHCIVTNDSDLILM 178
Query: 241 SLATHEIHFSILREV 255
SL +H + I ++
Sbjct: 179 SLRSHIPNIDIYNDI 193
>gi|328870339|gb|EGG18714.1| hypothetical protein DFA_04210 [Dictyostelium fasciculatum]
Length = 743
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 120/310 (38%), Gaps = 95/310 (30%)
Query: 43 NPNGMEFDNLYLDMNGIIHPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLA 102
N G E +L++DMN IIH F + T ++K I I P K L+L
Sbjct: 63 NTRGAETTHLFMDMNSIIHTIFR---RNPNTDTSKIYKQINMRIKQTVDEHFPVKTLFLT 119
Query: 103 IDGVAPRAKMNQQRTRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVIT 162
DG PRAK+ QR RR +K K + S++IT
Sbjct: 120 TDGPGPRAKIPLQRKRR-----------------------------SKSKEDGISSSLIT 150
Query: 163 PGTQFMAVLSAAL-QYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPG 221
PGT FM+ L +L YF +R + I+S ++ GEGE KI YI N
Sbjct: 151 PGTMFMSGLKDSLANYFKHSR-------SVSSAIISASDRYGEGEFKIFEYI----NSKT 199
Query: 222 FDPNTRHCLYGLDADLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQVGHLAAECHGK 281
+ ++ D+D+I+ S+ S +I KC+ H+A
Sbjct: 200 WTDQDSVIVFSDDSDVILCSM------LSSAPNIIVKGTSSTKCY------HIAD----- 242
Query: 282 PGDNPADWNGVDDTPIHKKKYQFLNIWVLREYLQYELDIPNPPFPINFERIVDDFVFLCF 341
L++ L I + P IN +++++DFVFL
Sbjct: 243 ----------------------------LKQQL-----IASAPL-INPKQLIEDFVFLNL 268
Query: 342 FVGNDFLPHM 351
F G+D+ P M
Sbjct: 269 FRGSDYYPRM 278
>gi|390371171|dbj|GAB65052.1| 5'-3' exoribonuclease [Plasmodium cynomolgi strain B]
Length = 903
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 94/405 (23%), Positives = 159/405 (39%), Gaps = 88/405 (21%)
Query: 2 GVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGME-----------FD 50
G+P ++W+ +P S V +VE++ +D + R + + G D
Sbjct: 23 GIPGLHKWVIQNFP-SCVKIVEKNSLLDVTHLRRNFTHRREHKKGGNDWKKKPTKIGHVD 81
Query: 51 NLYLDMNGIIHPCFHPDGKPAPTSYDDVFKSIFDYIDHIFLLVRPRKLLYLAIDGVAPRA 110
NL DMN ++H + D F + I ++ P+K + AIDG+ P +
Sbjct: 82 NLLFDMNQLLHK-----ANVQFVNDDQYFCKLSYLIRNVLKKFPPQKNIVFAIDGICPFS 136
Query: 111 KMNQQRTRRFRAAKDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCDSNVITPGTQFMAV 170
K+ Q RR + K+ + +SN IT G+ F+
Sbjct: 137 KLKLQIKRRAKG---------------------------KKVHDGDNSNDITCGSPFIQK 169
Query: 171 LSAALQYFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFD----PNT 226
+S L+ F+ L +P ++ KV +S GEGE K+M++I +N G +
Sbjct: 170 VSTFLRNFV-TFLVSLPKYEHIKVFISTDKEVGEGELKLMNWI---QNYVGGNRSRHEGG 225
Query: 227 RHC------------LYGLDADLIMLSLATHEI-------HFSILREVITLPGQQEKCFV 267
R C + G DADL++ LA ++ + + L +V ++++ +
Sbjct: 226 RSCVGGRSAADESFVIVGADADLLLQCLALKDVRNVCVYTYQTFLVDVGAWERKKKEDHL 285
Query: 268 CGQVGHLAAECHGKPGDNPADWNGVDDTPIHKKKYQFLNIWVLREYLQYELDIPNPPFPI 327
G +G E H P T K++ I VL Y L+ F +
Sbjct: 286 AG-LGLPNGEVH--PNGEAHHTGEAHHTGTSSPKWKKKKIKVL-----YNLNTFTNLFWM 337
Query: 328 NFERIVD----DFVFLCFFVGNDFLPHMPTLEIREGAINLLMHVY 368
+ R +D D + L GND+LP +IREG + Y
Sbjct: 338 KYPRAIDQIRRDMLILFILKGNDYLP-----KIREGNFSTFFEAY 377
>gi|170574442|ref|XP_001892815.1| hypothetical protein Bm1_06725 [Brugia malayi]
gi|158601436|gb|EDP38350.1| hypothetical protein Bm1_06725 [Brugia malayi]
Length = 205
Score = 68.6 bits (166), Expect = 1e-08, Method: Composition-based stats.
Identities = 34/119 (28%), Positives = 61/119 (51%), Gaps = 9/119 (7%)
Query: 324 PFPINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHVYRREFTAMGGYLTDAG 383
PF N E ++DD++ + F +GNDF+PH+P + I E A+ LL Y + GY+ +AG
Sbjct: 15 PFDYNLESVIDDWILMGFLIGNDFIPHLPHVHIHEDALPLLYATYNEVLPQLDGYINEAG 74
Query: 384 EVLLDRVEKFIQSVA---------VYEDQIFQKRTRIQQAYEYNEAMKLNARRESSEEL 433
+ L R + F+++ A +D+ + R A++ + N + +E+L
Sbjct: 75 VLNLKRFQIFLKNFAKNDKKNFLEQMDDEAYLSSKRTSNAWKKDAFTSNNDEQSFNEDL 133
>gi|425701568|gb|AFX92730.1| putative 5'-3' exonuclease 20 [Megavirus courdo11]
Length = 782
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 115/276 (41%), Gaps = 60/276 (21%)
Query: 99 LYLAIDGVAPRAKMNQQRTRRFRAA-KDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCD 157
L +AIDGV + KM +Q+ RR+ +A ++ ++ E + ++ A + +
Sbjct: 140 LLIAIDGVPSKGKMVEQKQRRYLSAITESYKSNILREYKKYLLKQPDYTYLATKDSIKWN 199
Query: 158 SNVITPGTQFMAVLSAALQ------YFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMS 211
N ITPGT FM L + LQ F R N ++I+SD GEGE KI++
Sbjct: 200 RNKITPGTAFMHKLVSYLQSDKIQKSFTTNRSN-------LEIIISDMYETGEGEKKIVN 252
Query: 212 YIRLQRNLPGFDPNTRHCLYGLDADLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQV 271
Y+ N +D + +Y DAD+I+L + +LR G+
Sbjct: 253 YV----NKYLYDTKSSVMIYSPDADVILLCMLLPVSKLYMLRHNQQFSGRNS-------- 300
Query: 272 GHLAAECHGKPGDNPADWNGVDDTPIHKKKYQFLNIWVLREYLQYELDIPNPPFPI-NFE 330
Y ++I L+ + Y ++ +P + NFE
Sbjct: 301 ------------------------------YDLIDIKSLKNNISYYIN-NHPDYSRENFE 329
Query: 331 --RIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLL 364
I D V L GNDF+P + TL +++G N++
Sbjct: 330 IDNINYDIVCLSTLFGNDFVPKIETLNVKKGFQNIM 365
>gi|448825634|ref|YP_007418565.1| putative 5'-3' exonuclease 20 [Megavirus lba]
gi|444236819|gb|AGD92589.1| putative 5'-3' exonuclease 20 [Megavirus lba]
Length = 782
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 112/277 (40%), Gaps = 62/277 (22%)
Query: 99 LYLAIDGVAPRAKMNQQRTRRFRAA-KDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCD 157
L +AIDGV + KM +Q+ RR+ +A ++ ++ E + ++ A + +
Sbjct: 140 LLIAIDGVPSKGKMVEQKQRRYLSAITESYKSNILREYKKYLLKQPDYTYLATKDSIKWN 199
Query: 158 SNVITPGTQFMAVLSAALQ------YFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMS 211
N ITPGT FM L + LQ F R N ++I+SD GEGE KI++
Sbjct: 200 RNKITPGTAFMHKLVSYLQSDKIQKSFTTNRSN-------LEIIISDMYETGEGEKKIVN 252
Query: 212 YIRLQRNLPGFDPNTRHCLYGLDADLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQV 271
Y+ N +D + +Y DAD+I+L + +LR G+
Sbjct: 253 YV----NKYLYDTKSSVMIYSPDADVILLCMLLPVSKLYMLRHNQQFSGRNS-------- 300
Query: 272 GHLAAECHGKPGDNPADWNGVDDTPIHKKKYQFLNIWVLREYLQYEL----DIPNPPFPI 327
Y ++I L+ + Y + D F I
Sbjct: 301 ------------------------------YDLIDIKSLKNNISYYINNHPDYSRENFKI 330
Query: 328 NFERIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLL 364
+ I D V L GNDF+P + TL +++G N++
Sbjct: 331 --DNINYDIVCLSTLFGNDFVPKIETLNVKKGFQNIM 365
>gi|363539809|ref|YP_004894696.1| mg645 gene product [Megavirus chiliensis]
gi|350610974|gb|AEQ32418.1| putative 5'-3' exonuclease 20 [Megavirus chiliensis]
Length = 782
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 113/273 (41%), Gaps = 54/273 (19%)
Query: 99 LYLAIDGVAPRAKMNQQRTRRFRAA-KDAAEAEAEEERLRKEFEEAGKLLSAKEKPETCD 157
L +AIDGV + KM +Q+ RR+ +A ++ ++ E + ++ A + +
Sbjct: 140 LLIAIDGVPSKGKMVEQKQRRYLSAITESYKSNILREYKKYLLKQPDYTYLATKDSIKWN 199
Query: 158 SNVITPGTQFMAVLSAALQ------YFIQARLNQIPGWQFTKVILSDANVPGEGEHKIMS 211
N ITPGT FM L + LQ F R N ++I+SD GEGE KI++
Sbjct: 200 RNKITPGTAFMHKLVSYLQSDKIQKSFTTNRPN-------LEIIISDMYETGEGEKKIVN 252
Query: 212 YIRLQRNLPGFDPNTRHCLYGLDADLIMLSLATHEIHFSILREVITLPGQQEKCFVCGQV 271
Y+ N +D + +Y DAD+I+L + +LR G+ + +
Sbjct: 253 YV----NKYLYDTKSSVMIYSPDADVILLCMLLPVSKLYMLRHNQQFSGRNSYDLI--DI 306
Query: 272 GHLAAECHGKPGDNPADWNGVDDTPIHKKKYQFLNIWVLREYLQYELDIPNPPFPINFER 331
L ++P +Y Q +I N IN+
Sbjct: 307 KSLKNNISYYINNHP-------------------------DYSQENFEIDN----INY-- 335
Query: 332 IVDDFVFLCFFVGNDFLPHMPTLEIREGAINLL 364
D V L GNDF+P + TL +++G N++
Sbjct: 336 ---DIVCLSTLFGNDFVPKIETLNVKKGFQNIM 365
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.322 0.140 0.437
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,880,855,513
Number of Sequences: 23463169
Number of extensions: 543917538
Number of successful extensions: 1308322
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1029
Number of HSP's successfully gapped in prelim test: 95
Number of HSP's that attempted gapping in prelim test: 1301775
Number of HSP's gapped (non-prelim): 2422
length of query: 692
length of database: 8,064,228,071
effective HSP length: 150
effective length of query: 542
effective length of database: 8,839,720,017
effective search space: 4791128249214
effective search space used: 4791128249214
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 81 (35.8 bits)