Query 005532
Match_columns 692
No_of_seqs 620 out of 4686
Neff 7.5
Searched_HMMs 46136
Date Fri Mar 29 00:57:39 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005532.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/005532hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0488 Uup ATPase components 100.0 4E-103 9E-108 874.3 59.1 522 96-632 2-527 (530)
2 PRK10636 putative ABC transpor 100.0 2.3E-92 5.1E-97 818.0 67.9 516 97-630 1-517 (638)
3 PRK11147 ABC transporter ATPas 100.0 1.4E-91 3E-96 813.1 69.7 522 96-630 2-528 (635)
4 PRK11819 putative ABC transpor 100.0 1.1E-88 2.4E-93 778.6 69.0 526 96-633 5-536 (556)
5 KOG0927 Predicted transporter 100.0 8.5E-91 1.8E-95 741.9 45.7 532 93-641 71-607 (614)
6 TIGR03719 ABC_ABC_ChvD ATP-bin 100.0 2.7E-87 5.9E-92 766.8 67.7 525 97-633 4-534 (552)
7 PRK15064 ABC transporter ATP-b 100.0 4.1E-87 8.8E-92 762.6 65.0 523 97-630 1-525 (530)
8 PLN03073 ABC transporter F fam 100.0 8.6E-85 1.9E-89 757.4 64.0 519 94-630 174-714 (718)
9 PRK09700 D-allose transporter 100.0 2.1E-80 4.5E-85 704.5 46.7 442 96-621 4-490 (510)
10 PRK10261 glutathione transport 100.0 4.2E-80 9E-85 715.2 49.9 472 94-629 9-552 (623)
11 PRK13549 xylose transporter AT 100.0 1.2E-80 2.7E-85 705.4 44.6 443 96-628 4-492 (506)
12 PRK15439 autoinducer 2 ABC tra 100.0 5.5E-80 1.2E-84 700.2 48.3 442 94-628 8-490 (510)
13 TIGR03269 met_CoM_red_A2 methy 100.0 1.2E-79 2.6E-84 699.8 50.9 430 98-628 1-515 (520)
14 PRK15134 microcin C ABC transp 100.0 1.8E-79 3.9E-84 699.6 48.4 444 96-629 4-514 (529)
15 COG1123 ATPase components of v 100.0 2.3E-79 5E-84 670.6 47.0 452 96-629 4-518 (539)
16 TIGR02633 xylG D-xylose ABC tr 100.0 1.5E-79 3.3E-84 696.0 45.1 436 97-620 1-483 (500)
17 PRK11288 araG L-arabinose tran 100.0 1.7E-79 3.7E-84 695.2 44.7 441 96-629 3-484 (501)
18 PRK10762 D-ribose transporter 100.0 2.7E-79 5.9E-84 693.7 44.2 437 96-626 3-480 (501)
19 KOG0062 ATPase component of AB 100.0 1.4E-79 3E-84 652.7 37.4 487 95-630 78-569 (582)
20 PRK10938 putative molybdenum t 100.0 1.2E-78 2.7E-83 686.9 44.6 435 97-622 3-485 (490)
21 PRK10982 galactose/methyl gala 100.0 3.1E-78 6.8E-83 683.6 44.6 437 100-629 1-479 (491)
22 KOG0066 eIF2-interacting prote 100.0 2.1E-74 4.5E-79 597.8 35.8 517 96-634 263-795 (807)
23 KOG0055 Multidrug/pheromone ex 100.0 2.3E-73 5.1E-78 662.6 48.7 538 49-630 304-1213(1228)
24 PRK13409 putative ATPase RIL; 100.0 6.2E-73 1.4E-77 647.4 42.6 420 102-620 78-533 (590)
25 COG4172 ABC-type uncharacteriz 100.0 8.5E-72 1.8E-76 576.9 42.1 447 94-630 3-516 (534)
26 KOG0054 Multidrug resistance-a 100.0 3.3E-71 7.3E-76 658.9 45.4 547 24-628 453-1361(1381)
27 COG1129 MglA ABC-type sugar tr 100.0 1.6E-70 3.5E-75 597.5 40.4 433 95-620 6-481 (500)
28 PLN03130 ABC transporter C fam 100.0 3.1E-69 6.7E-74 673.9 53.1 486 96-630 613-1461(1622)
29 PLN03232 ABC transporter C fam 100.0 7.1E-69 1.5E-73 670.4 49.6 206 419-630 1229-1458(1495)
30 TIGR00957 MRP_assoc_pro multi 100.0 6.6E-68 1.4E-72 662.5 54.2 207 418-630 1278-1508(1522)
31 COG3845 ABC-type uncharacteriz 100.0 2.1E-66 4.7E-71 553.4 38.9 437 96-620 3-483 (501)
32 PTZ00265 multidrug resistance 100.0 7.3E-65 1.6E-69 629.2 54.8 203 424-630 1165-1452(1466)
33 TIGR01271 CFTR_protein cystic 100.0 7.1E-64 1.5E-68 624.6 58.4 206 418-630 1211-1440(1490)
34 PTZ00243 ABC transporter; Prov 100.0 5.1E-64 1.1E-68 626.2 53.5 202 423-630 1307-1533(1560)
35 TIGR01257 rim_protein retinal- 100.0 2.3E-61 4.9E-66 597.3 58.1 202 423-628 1936-2157(2272)
36 TIGR00956 3a01205 Pleiotropic 100.0 4.1E-58 8.8E-63 568.6 47.3 197 424-624 759-987 (1394)
37 PLN03140 ABC transporter G fam 100.0 8.8E-56 1.9E-60 546.0 44.8 197 424-624 867-1104(1470)
38 COG1245 Predicted ATPase, RNas 100.0 4.1E-50 8.9E-55 421.1 33.9 434 102-615 79-531 (591)
39 COG1126 GlnQ ABC-type polar am 100.0 4.3E-51 9.3E-56 394.8 21.9 209 97-345 2-224 (240)
40 COG0488 Uup ATPase components 100.0 1.5E-48 3.3E-53 436.0 28.0 222 423-649 2-259 (530)
41 COG1126 GlnQ ABC-type polar am 100.0 1.7E-48 3.6E-53 376.8 21.9 205 423-631 1-226 (240)
42 COG1116 TauB ABC-type nitrate/ 100.0 3.6E-48 7.8E-53 385.6 21.1 196 97-332 3-207 (248)
43 COG1125 OpuBA ABC-type proline 100.0 2.8E-48 6E-53 382.1 19.0 204 97-339 1-219 (309)
44 COG1135 AbcC ABC-type metal io 100.0 7E-47 1.5E-51 383.1 21.3 206 97-343 1-228 (339)
45 COG1127 Ttg2A ABC-type transpo 100.0 1.3E-46 2.7E-51 369.1 22.1 212 95-345 6-234 (263)
46 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 3E-46 6.5E-51 376.8 21.9 212 95-344 2-225 (254)
47 COG1120 FepC ABC-type cobalami 100.0 4E-46 8.7E-51 377.9 21.4 209 97-342 2-224 (258)
48 COG1136 SalX ABC-type antimicr 100.0 3E-45 6.5E-50 364.6 23.2 197 98-334 2-220 (226)
49 COG1124 DppF ABC-type dipeptid 100.0 2.1E-45 4.6E-50 362.4 21.4 199 96-335 2-221 (252)
50 COG1125 OpuBA ABC-type proline 100.0 5.8E-45 1.3E-49 358.7 20.5 203 424-629 1-224 (309)
51 COG3839 MalK ABC-type sugar tr 100.0 6.3E-45 1.4E-49 382.6 22.0 202 96-337 2-215 (338)
52 COG1116 TauB ABC-type nitrate/ 100.0 7.3E-45 1.6E-49 361.9 21.2 191 423-616 2-207 (248)
53 COG1118 CysA ABC-type sulfate/ 100.0 2.9E-45 6.3E-50 370.3 18.2 202 97-336 2-218 (345)
54 COG3842 PotA ABC-type spermidi 100.0 4.7E-45 1E-49 385.5 20.5 209 96-344 4-224 (352)
55 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 2.3E-44 5E-49 363.2 23.7 205 423-630 3-227 (254)
56 COG1120 FepC ABC-type cobalami 100.0 1.9E-44 4E-49 365.7 21.3 202 424-629 2-227 (258)
57 COG3638 ABC-type phosphate/pho 100.0 3.6E-44 7.9E-49 350.9 21.2 215 96-343 2-234 (258)
58 COG1124 DppF ABC-type dipeptid 100.0 3.8E-44 8.3E-49 353.4 21.0 199 423-621 2-223 (252)
59 COG2884 FtsE Predicted ATPase 100.0 3.6E-44 7.7E-49 339.2 18.5 202 97-338 1-219 (223)
60 cd03261 ABC_Org_Solvent_Resist 100.0 1.6E-43 3.4E-48 362.8 24.6 206 98-343 1-223 (235)
61 PRK13537 nodulation ABC transp 100.0 1.7E-43 3.7E-48 375.7 25.4 207 96-343 6-224 (306)
62 TIGR02314 ABC_MetN D-methionin 100.0 1.6E-43 3.5E-48 379.6 25.3 207 97-344 1-228 (343)
63 COG1122 CbiO ABC-type cobalt t 100.0 1.1E-43 2.3E-48 359.9 22.4 208 96-344 2-226 (235)
64 TIGR00960 3a0501s02 Type II (G 100.0 1.2E-43 2.6E-48 359.0 22.7 196 98-333 2-215 (216)
65 COG1127 Ttg2A ABC-type transpo 100.0 1.3E-43 2.8E-48 347.9 21.9 206 422-630 6-235 (263)
66 COG1135 AbcC ABC-type metal io 100.0 1E-43 2.2E-48 360.1 21.6 204 424-630 1-232 (339)
67 cd03259 ABC_Carb_Solutes_like 100.0 2E-43 4.3E-48 356.6 23.2 198 98-335 1-210 (213)
68 PRK11650 ugpC glycerol-3-phosp 100.0 3.1E-43 6.8E-48 380.1 25.7 207 97-344 3-222 (356)
69 PRK00349 uvrA excinuclease ABC 100.0 2.2E-42 4.9E-47 407.9 35.0 337 235-630 466-927 (943)
70 PRK11432 fbpC ferric transport 100.0 6E-43 1.3E-47 376.9 26.5 208 95-343 4-223 (351)
71 PRK13536 nodulation factor exp 100.0 8.3E-43 1.8E-47 374.5 26.9 209 94-343 38-258 (340)
72 PRK10636 putative ABC transpor 100.0 2.1E-42 4.6E-47 401.1 31.8 218 424-645 1-251 (638)
73 cd03265 ABC_DrrA DrrA is the A 100.0 7.6E-43 1.6E-47 354.2 24.5 202 98-340 1-215 (220)
74 TIGR03265 PhnT2 putative 2-ami 100.0 7.8E-43 1.7E-47 376.6 25.6 207 96-343 3-221 (353)
75 COG4555 NatA ABC-type Na+ tran 100.0 1.9E-43 4.2E-48 336.9 17.6 206 97-343 1-219 (245)
76 TIGR01288 nodI ATP-binding ABC 100.0 1.2E-42 2.5E-47 369.4 25.2 205 97-342 4-220 (303)
77 COG1131 CcmA ABC-type multidru 100.0 1.4E-42 3E-47 365.7 25.4 207 96-343 3-223 (293)
78 cd03301 ABC_MalK_N The N-termi 100.0 1.1E-42 2.3E-47 351.2 23.1 199 98-336 1-211 (213)
79 PRK09452 potA putrescine/sperm 100.0 2.1E-42 4.6E-47 375.1 26.6 209 94-343 11-231 (375)
80 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 8.6E-43 1.9E-47 353.2 21.9 195 98-333 1-217 (218)
81 PRK11000 maltose/maltodextrin 100.0 1.8E-42 3.8E-47 376.5 25.6 206 97-343 3-220 (369)
82 cd03296 ABC_CysA_sulfate_impor 100.0 2E-42 4.3E-47 355.6 24.5 209 97-342 2-222 (239)
83 TIGR00630 uvra excinuclease AB 100.0 1.3E-41 2.9E-46 400.7 34.6 327 242-626 470-921 (924)
84 PRK11831 putative ABC transpor 100.0 2.3E-42 4.9E-47 361.3 25.0 210 95-344 5-231 (269)
85 TIGR02673 FtsE cell division A 100.0 1.5E-42 3.1E-47 350.5 22.6 196 98-333 2-214 (214)
86 cd03293 ABC_NrtD_SsuB_transpor 100.0 2.2E-42 4.7E-47 350.8 23.7 198 98-335 1-213 (220)
87 COG1136 SalX ABC-type antimicr 100.0 2.4E-42 5.3E-47 343.8 22.9 193 424-619 1-221 (226)
88 cd03269 ABC_putative_ATPase Th 100.0 2.7E-42 5.9E-47 347.6 23.6 198 98-335 1-207 (210)
89 TIGR03258 PhnT 2-aminoethylpho 100.0 3E-42 6.4E-47 372.7 25.3 207 97-344 5-226 (362)
90 cd03266 ABC_NatA_sodium_export 100.0 2.4E-42 5.3E-47 349.9 23.0 198 98-335 2-215 (218)
91 PRK10851 sulfate/thiosulfate t 100.0 4E-42 8.7E-47 371.1 26.1 211 97-344 2-224 (353)
92 cd03219 ABC_Mj1267_LivG_branch 100.0 3E-42 6.6E-47 353.4 23.9 215 98-343 1-229 (236)
93 TIGR03522 GldA_ABC_ATP gliding 100.0 5.2E-42 1.1E-46 363.9 26.2 206 97-343 2-218 (301)
94 PRK11607 potG putrescine trans 100.0 6.5E-42 1.4E-46 371.9 27.3 208 95-343 17-236 (377)
95 PRK10619 histidine/lysine/argi 100.0 6.8E-42 1.5E-46 355.4 26.2 210 96-344 4-239 (257)
96 COG3842 PotA ABC-type spermidi 100.0 8.4E-43 1.8E-47 368.4 19.5 206 422-630 3-227 (352)
97 PRK11153 metN DL-methionine tr 100.0 4.5E-42 9.8E-47 370.2 25.5 205 97-342 1-226 (343)
98 PRK11264 putative amino-acid A 100.0 6.3E-42 1.4E-46 354.1 25.3 208 97-344 3-231 (250)
99 cd03264 ABC_drug_resistance_li 100.0 4.3E-42 9.3E-47 346.4 23.4 197 98-335 1-208 (211)
100 cd03226 ABC_cobalt_CbiO_domain 100.0 1.9E-42 4.2E-47 347.3 20.8 191 100-334 2-204 (205)
101 PRK00635 excinuclease ABC subu 100.0 2.9E-41 6.3E-46 412.9 35.3 329 243-630 460-906 (1809)
102 cd03218 ABC_YhbG The ABC trans 100.0 6E-42 1.3E-46 350.3 24.3 205 98-343 1-219 (232)
103 PRK09493 glnQ glutamine ABC tr 100.0 7.6E-42 1.6E-46 351.4 25.1 207 98-344 2-223 (240)
104 PRK10908 cell division protein 100.0 6.1E-42 1.3E-46 348.0 24.0 198 98-335 2-216 (222)
105 cd03263 ABC_subfamily_A The AB 100.0 6E-42 1.3E-46 347.5 23.9 203 98-341 1-216 (220)
106 PRK11248 tauB taurine transpor 100.0 6E-42 1.3E-46 355.1 24.2 199 97-335 1-210 (255)
107 PRK11247 ssuB aliphatic sulfon 100.0 5.6E-42 1.2E-46 355.3 23.7 198 96-340 11-217 (257)
108 cd03258 ABC_MetN_methionine_tr 100.0 6.4E-42 1.4E-46 350.4 23.6 204 98-342 2-226 (233)
109 cd03292 ABC_FtsE_transporter F 100.0 5.5E-42 1.2E-46 346.2 22.8 196 98-333 1-213 (214)
110 cd03268 ABC_BcrA_bacitracin_re 100.0 6E-42 1.3E-46 344.5 22.9 194 98-335 1-205 (208)
111 COG3839 MalK ABC-type sugar tr 100.0 4E-42 8.6E-47 361.4 22.1 205 423-630 2-224 (338)
112 PRK13651 cobalt transporter AT 100.0 1.1E-41 2.3E-46 361.4 25.4 208 97-344 2-252 (305)
113 PRK13634 cbiO cobalt transport 100.0 8.4E-42 1.8E-46 360.5 24.5 208 97-344 2-233 (290)
114 cd03262 ABC_HisP_GlnQ_permease 100.0 5.4E-42 1.2E-46 346.0 22.0 197 98-333 1-212 (213)
115 cd03225 ABC_cobalt_CbiO_domain 100.0 4.6E-42 1E-46 346.1 21.4 194 100-333 2-211 (211)
116 PRK11124 artP arginine transpo 100.0 1.3E-41 2.9E-46 350.0 25.1 208 97-344 2-228 (242)
117 PRK09536 btuD corrinoid ABC tr 100.0 1.1E-41 2.3E-46 371.8 25.5 212 96-344 2-226 (402)
118 cd03295 ABC_OpuCA_Osmoprotecti 100.0 1.2E-41 2.6E-46 350.5 24.3 205 98-342 1-221 (242)
119 TIGR02315 ABC_phnC phosphonate 100.0 7.3E-42 1.6E-46 352.1 22.5 213 98-343 2-232 (243)
120 PRK11147 ABC transporter ATPas 100.0 4.6E-41 9.9E-46 390.6 32.0 210 423-638 2-251 (635)
121 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 1.7E-41 3.7E-46 347.9 25.0 205 97-343 1-218 (236)
122 TIGR02211 LolD_lipo_ex lipopro 100.0 1.3E-41 2.8E-46 345.3 23.8 196 98-334 2-219 (221)
123 cd03256 ABC_PhnC_transporter A 100.0 1.1E-41 2.3E-46 350.4 23.3 213 98-343 1-231 (241)
124 PRK10895 lipopolysaccharide AB 100.0 1.2E-41 2.6E-46 350.2 23.7 208 97-344 3-224 (241)
125 PRK13637 cbiO cobalt transport 100.0 1.5E-41 3.3E-46 358.0 25.0 208 97-344 2-232 (287)
126 cd03261 ABC_Org_Solvent_Resist 100.0 1.7E-41 3.6E-46 347.8 24.5 201 425-629 1-225 (235)
127 PRK13643 cbiO cobalt transport 100.0 1.9E-41 4.1E-46 357.5 25.5 209 97-345 1-232 (288)
128 TIGR00960 3a0501s02 Type II (G 100.0 9.5E-42 2.1E-46 345.1 22.2 192 424-618 1-216 (216)
129 COG1118 CysA ABC-type sulfate/ 100.0 3.5E-42 7.5E-47 348.0 18.8 202 424-628 2-226 (345)
130 COG1117 PstB ABC-type phosphat 100.0 2.7E-42 5.8E-47 332.2 16.9 205 95-339 5-231 (253)
131 PRK11629 lolD lipoprotein tran 100.0 2.2E-41 4.8E-46 346.5 24.8 199 96-335 4-224 (233)
132 cd03259 ABC_Carb_Solutes_like 100.0 1.4E-41 3E-46 343.2 22.9 193 425-620 1-211 (213)
133 COG3638 ABC-type phosphate/pho 100.0 7.5E-42 1.6E-46 334.7 20.1 202 423-628 2-235 (258)
134 PRK13647 cbiO cobalt transport 100.0 1.7E-41 3.8E-46 355.3 24.4 205 97-342 4-223 (274)
135 PRK10584 putative ABC transpor 100.0 2.3E-41 5.1E-46 345.1 24.4 199 96-335 5-225 (228)
136 PRK13641 cbiO cobalt transport 100.0 2.4E-41 5.1E-46 356.7 25.2 208 97-344 2-232 (287)
137 PRK13537 nodulation ABC transp 100.0 3.1E-41 6.7E-46 358.4 26.1 205 422-630 5-227 (306)
138 COG1122 CbiO ABC-type cobalt t 100.0 1.4E-41 2.9E-46 344.5 22.2 205 423-630 2-228 (235)
139 TIGR01188 drrA daunorubicin re 100.0 1.4E-41 3E-46 360.9 23.4 198 105-343 1-210 (302)
140 PRK13646 cbiO cobalt transport 100.0 2.4E-41 5.2E-46 356.4 24.7 208 97-344 2-233 (286)
141 cd03257 ABC_NikE_OppD_transpor 100.0 2E-41 4.3E-46 345.4 23.1 202 97-335 1-225 (228)
142 PRK13631 cbiO cobalt transport 100.0 3.9E-41 8.4E-46 359.2 26.1 211 94-344 18-263 (320)
143 cd03235 ABC_Metallic_Cations A 100.0 9E-42 2E-46 344.5 20.0 199 100-334 2-210 (213)
144 PRK14250 phosphate ABC transpo 100.0 3E-41 6.6E-46 347.2 24.1 201 96-341 2-216 (241)
145 TIGR03411 urea_trans_UrtD urea 100.0 4.2E-41 9.1E-46 346.3 25.1 215 97-344 2-229 (242)
146 cd03224 ABC_TM1139_LivF_branch 100.0 2.8E-41 6E-46 343.0 23.4 201 98-341 1-216 (222)
147 cd03260 ABC_PstB_phosphate_tra 100.0 1.9E-41 4.1E-46 345.5 22.1 202 98-340 1-223 (227)
148 COG1137 YhbG ABC-type (unclass 100.0 1.2E-42 2.7E-47 331.0 12.3 209 96-345 3-227 (243)
149 PRK15064 ABC transporter ATP-b 100.0 9.3E-41 2E-45 381.3 30.1 210 424-636 1-248 (530)
150 PRK10070 glycine betaine trans 100.0 3.3E-41 7.3E-46 367.7 25.2 192 111-343 42-251 (400)
151 TIGR00972 3a0107s01c2 phosphat 100.0 4.7E-41 1E-45 347.0 25.1 208 97-344 1-230 (247)
152 cd03226 ABC_cobalt_CbiO_domain 100.0 1.8E-41 3.9E-46 340.3 21.1 192 426-619 1-205 (205)
153 TIGR01186 proV glycine betaine 100.0 2.7E-41 5.8E-46 364.4 23.7 199 105-344 1-217 (363)
154 TIGR03005 ectoine_ehuA ectoine 100.0 4.1E-41 8.8E-46 348.6 24.2 207 98-344 1-234 (252)
155 TIGR02314 ABC_MetN D-methionin 100.0 3.8E-41 8.3E-46 361.2 24.8 203 424-630 1-230 (343)
156 PRK15079 oligopeptide ABC tran 100.0 5.9E-41 1.3E-45 359.2 26.2 211 95-343 6-248 (331)
157 COG0411 LivG ABC-type branched 100.0 8.5E-42 1.8E-46 337.1 17.9 220 96-344 3-237 (250)
158 TIGR01978 sufC FeS assembly AT 100.0 4.9E-41 1.1E-45 345.9 24.4 212 98-342 1-230 (243)
159 PRK13548 hmuV hemin importer A 100.0 5.2E-41 1.1E-45 348.9 24.7 206 97-343 2-227 (258)
160 PRK11247 ssuB aliphatic sulfon 100.0 5E-41 1.1E-45 348.2 24.3 196 422-620 10-214 (257)
161 PRK14247 phosphate ABC transpo 100.0 7.4E-41 1.6E-45 346.2 25.4 211 96-344 2-232 (250)
162 PRK15112 antimicrobial peptide 100.0 5.1E-41 1.1E-45 350.7 24.4 210 96-344 3-237 (267)
163 TIGR02769 nickel_nikE nickel i 100.0 5E-41 1.1E-45 350.4 24.3 208 97-343 2-237 (265)
164 PRK11819 putative ABC transpor 100.0 1.7E-40 3.8E-45 380.6 30.8 209 422-635 4-255 (556)
165 PRK11701 phnK phosphonate C-P 100.0 8.4E-41 1.8E-45 347.4 25.3 209 96-343 5-238 (258)
166 TIGR01288 nodI ATP-binding ABC 100.0 8.3E-41 1.8E-45 355.2 25.7 204 423-630 3-224 (303)
167 COG2884 FtsE Predicted ATPase 100.0 2E-41 4.3E-46 320.6 18.5 196 424-622 1-219 (223)
168 PRK13638 cbiO cobalt transport 100.0 5.1E-41 1.1E-45 351.5 23.5 207 97-344 1-223 (271)
169 PRK13536 nodulation factor exp 100.0 8.4E-41 1.8E-45 359.0 25.7 206 421-630 38-261 (340)
170 PRK13636 cbiO cobalt transport 100.0 8E-41 1.7E-45 351.9 24.9 209 96-345 4-230 (283)
171 PRK13649 cbiO cobalt transport 100.0 8E-41 1.7E-45 351.7 24.5 207 97-343 2-231 (280)
172 cd03294 ABC_Pro_Gly_Bertaine T 100.0 3.5E-41 7.6E-46 352.2 21.5 204 99-343 26-247 (269)
173 cd03298 ABC_ThiQ_thiamine_tran 100.0 5.4E-41 1.2E-45 338.3 22.1 196 98-335 1-208 (211)
174 cd03265 ABC_DrrA DrrA is the A 100.0 8.7E-41 1.9E-45 339.1 23.7 196 425-624 1-215 (220)
175 COG1131 CcmA ABC-type multidru 100.0 7.5E-41 1.6E-45 352.5 24.0 202 424-629 4-225 (293)
176 PRK11308 dppF dipeptide transp 100.0 1.2E-40 2.7E-45 356.4 25.9 208 96-342 4-240 (327)
177 PRK14267 phosphate ABC transpo 100.0 1.3E-40 2.9E-45 344.9 25.3 210 96-343 3-234 (253)
178 PRK11231 fecE iron-dicitrate t 100.0 1E-40 2.2E-45 346.2 24.4 210 97-343 2-224 (255)
179 PRK14242 phosphate transporter 100.0 1.4E-40 3E-45 344.7 25.4 208 96-343 5-234 (253)
180 COG3840 ThiQ ABC-type thiamine 100.0 1.9E-41 4E-46 318.2 16.6 206 98-346 2-219 (231)
181 PRK11614 livF leucine/isoleuci 100.0 1E-40 2.2E-45 342.5 23.7 205 96-343 4-223 (237)
182 PRK11300 livG leucine/isoleuci 100.0 9.8E-41 2.1E-45 346.3 23.8 221 97-343 5-240 (255)
183 TIGR03410 urea_trans_UrtE urea 100.0 7.8E-41 1.7E-45 341.7 22.5 203 98-343 1-218 (230)
184 PRK14268 phosphate ABC transpo 100.0 1.7E-40 3.6E-45 345.1 25.4 208 95-343 10-239 (258)
185 TIGR03265 PhnT2 putative 2-ami 100.0 1.3E-40 2.9E-45 359.2 25.5 204 423-630 3-224 (353)
186 PRK13652 cbiO cobalt transport 100.0 1.4E-40 3E-45 349.2 24.9 209 96-345 2-226 (277)
187 PRK13650 cbiO cobalt transport 100.0 1.1E-40 2.3E-45 350.3 24.1 206 97-344 4-227 (279)
188 PRK11650 ugpC glycerol-3-phosp 100.0 1.3E-40 2.9E-45 359.6 25.4 203 424-630 3-224 (356)
189 cd03293 ABC_NrtD_SsuB_transpor 100.0 1.2E-40 2.6E-45 338.0 23.5 193 425-620 1-214 (220)
190 PRK11831 putative ABC transpor 100.0 1.5E-40 3.4E-45 347.4 24.9 205 422-630 5-233 (269)
191 PRK09984 phosphonate/organopho 100.0 1.1E-40 2.4E-45 347.3 23.6 216 96-344 3-240 (262)
192 cd03268 ABC_BcrA_bacitracin_re 100.0 1.3E-40 2.8E-45 334.8 23.2 193 425-620 1-206 (208)
193 PRK11432 fbpC ferric transport 100.0 1.4E-40 3E-45 358.5 25.1 204 422-629 4-225 (351)
194 PRK13645 cbiO cobalt transport 100.0 1.3E-40 2.9E-45 351.5 24.3 208 96-343 5-237 (289)
195 PRK14273 phosphate ABC transpo 100.0 1.9E-40 4.1E-45 344.0 25.0 209 95-343 5-235 (254)
196 cd03296 ABC_CysA_sulfate_impor 100.0 1.6E-40 3.5E-45 341.4 24.2 201 424-628 2-224 (239)
197 PRK10575 iron-hydroxamate tran 100.0 1.1E-40 2.4E-45 347.8 23.2 210 96-342 10-233 (265)
198 TIGR03873 F420-0_ABC_ATP propo 100.0 1.5E-40 3.3E-45 345.0 24.1 209 98-343 2-223 (256)
199 cd03301 ABC_MalK_N The N-termi 100.0 1.4E-40 3.1E-45 335.7 23.2 194 425-621 1-212 (213)
200 cd03266 ABC_NatA_sodium_export 100.0 1.5E-40 3.2E-45 336.8 23.2 194 424-620 1-216 (218)
201 cd03256 ABC_PhnC_transporter A 100.0 2E-40 4.2E-45 341.0 24.4 200 425-628 1-232 (241)
202 cd03219 ABC_Mj1267_LivG_branch 100.0 1.6E-40 3.5E-45 340.6 23.6 200 425-628 1-230 (236)
203 TIGR02315 ABC_phnC phosphonate 100.0 1.5E-40 3.3E-45 342.3 23.5 201 424-628 1-233 (243)
204 cd03269 ABC_putative_ATPase Th 100.0 1.9E-40 4E-45 334.2 23.6 193 425-620 1-208 (210)
205 PRK10253 iron-enterobactin tra 100.0 1.6E-40 3.4E-45 346.6 23.9 211 96-343 6-230 (265)
206 TIGR02323 CP_lyasePhnK phospho 100.0 2.4E-40 5.3E-45 342.9 25.0 208 97-343 3-235 (253)
207 PRK10744 pstB phosphate transp 100.0 2.6E-40 5.6E-45 344.1 25.2 209 95-343 11-241 (260)
208 PRK14241 phosphate transporter 100.0 3.3E-40 7.1E-45 343.0 25.9 209 97-344 4-240 (258)
209 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 1.1E-40 2.5E-45 337.6 21.7 190 425-618 1-218 (218)
210 TIGR02673 FtsE cell division A 100.0 1.3E-40 2.8E-45 336.3 21.9 191 424-617 1-214 (214)
211 PRK11248 tauB taurine transpor 100.0 2.2E-40 4.8E-45 343.4 24.2 194 424-620 1-211 (255)
212 PRK13644 cbiO cobalt transport 100.0 2.3E-40 5E-45 346.8 24.5 206 97-344 1-222 (274)
213 cd03235 ABC_Metallic_Cations A 100.0 8.2E-41 1.8E-45 337.5 20.4 192 426-618 1-210 (213)
214 TIGR03522 GldA_ABC_ATP gliding 100.0 3E-40 6.5E-45 350.5 25.6 203 424-630 2-221 (301)
215 PRK14235 phosphate transporter 100.0 4.1E-40 8.8E-45 343.9 26.1 210 95-343 17-248 (267)
216 PRK14256 phosphate ABC transpo 100.0 3.5E-40 7.6E-45 341.6 25.4 209 96-343 3-233 (252)
217 PRK10771 thiQ thiamine transpo 100.0 2.3E-40 4.9E-45 338.8 23.5 205 98-345 2-218 (232)
218 PRK11022 dppD dipeptide transp 100.0 3.4E-40 7.3E-45 353.1 25.7 208 97-343 3-240 (326)
219 PRK09493 glnQ glutamine ABC tr 100.0 3.2E-40 6.8E-45 339.4 24.5 203 424-630 1-225 (240)
220 cd03257 ABC_NikE_OppD_transpor 100.0 2.8E-40 6E-45 337.0 23.8 197 424-620 1-226 (228)
221 PRK13635 cbiO cobalt transport 100.0 2.5E-40 5.5E-45 347.3 24.0 207 96-344 4-227 (279)
222 TIGR03719 ABC_ABC_ChvD ATP-bin 100.0 1.1E-39 2.3E-44 374.0 31.3 207 423-634 3-252 (552)
223 PRK13543 cytochrome c biogenes 100.0 2.1E-40 4.4E-45 334.9 22.3 193 96-331 10-212 (214)
224 PRK13639 cbiO cobalt transport 100.0 3.5E-40 7.6E-45 345.8 24.8 207 97-344 1-224 (275)
225 PRK00635 excinuclease ABC subu 100.0 9.7E-39 2.1E-43 390.8 41.1 185 234-470 785-981 (1809)
226 PRK14248 phosphate ABC transpo 100.0 4.5E-40 9.8E-45 343.8 25.4 209 95-343 19-249 (268)
227 cd03300 ABC_PotA_N PotA is an 100.0 3.8E-40 8.2E-45 337.1 24.3 204 98-342 1-216 (232)
228 PRK10619 histidine/lysine/argi 100.0 4.7E-40 1E-44 341.6 25.1 206 422-630 3-241 (257)
229 PRK10247 putative ABC transpor 100.0 2E-40 4.3E-45 337.6 21.7 192 96-330 6-211 (225)
230 TIGR03740 galliderm_ABC gallid 100.0 4.5E-40 9.7E-45 334.5 24.2 198 98-340 1-207 (223)
231 COG4555 NatA ABC-type Na+ tran 100.0 7.1E-41 1.5E-45 319.3 17.0 201 424-628 1-220 (245)
232 PRK11000 maltose/maltodextrin 100.0 3.8E-40 8.3E-45 358.2 25.2 202 424-629 3-222 (369)
233 PRK14245 phosphate ABC transpo 100.0 5.7E-40 1.2E-44 339.6 25.4 209 96-344 2-232 (250)
234 PRK09452 potA putrescine/sperm 100.0 4.7E-40 1E-44 356.8 25.8 206 421-630 11-234 (375)
235 TIGR03411 urea_trans_UrtD urea 100.0 5.5E-40 1.2E-44 338.0 25.0 202 424-629 2-230 (242)
236 PRK10908 cell division protein 100.0 3.4E-40 7.4E-45 335.2 23.1 197 424-623 1-220 (222)
237 PRK11153 metN DL-methionine tr 100.0 4.9E-40 1.1E-44 354.4 25.4 202 424-629 1-229 (343)
238 PRK09536 btuD corrinoid ABC tr 100.0 3.9E-40 8.5E-45 359.5 24.8 204 423-630 2-228 (402)
239 TIGR03608 L_ocin_972_ABC putat 100.0 2E-40 4.3E-45 332.9 20.7 189 100-329 1-206 (206)
240 PRK14240 phosphate transporter 100.0 6.4E-40 1.4E-44 339.2 25.0 207 97-343 3-231 (250)
241 PRK14251 phosphate ABC transpo 100.0 5.7E-40 1.2E-44 339.8 24.7 206 97-342 4-231 (251)
242 PRK09473 oppD oligopeptide tra 100.0 7.2E-40 1.6E-44 350.9 26.2 211 95-344 10-249 (330)
243 PRK13643 cbiO cobalt transport 100.0 4.9E-40 1.1E-44 346.7 24.3 205 424-630 1-233 (288)
244 PRK15093 antimicrobial peptide 100.0 6.6E-40 1.4E-44 351.8 25.7 214 96-343 2-245 (330)
245 KOG0058 Peptide exporter, ABC 100.0 2.2E-40 4.8E-45 368.3 22.6 243 57-345 429-690 (716)
246 PRK14239 phosphate transporter 100.0 8.1E-40 1.8E-44 338.8 25.4 208 96-343 4-233 (252)
247 PRK11701 phnK phosphonate C-P 100.0 7.7E-40 1.7E-44 340.2 25.2 206 423-629 5-240 (258)
248 cd03299 ABC_ModC_like Archeal 100.0 6.7E-40 1.4E-44 335.9 24.3 205 98-344 1-217 (235)
249 cd03264 ABC_drug_resistance_li 100.0 5.5E-40 1.2E-44 331.0 23.3 192 425-620 1-209 (211)
250 cd03218 ABC_YhbG The ABC trans 100.0 6.3E-40 1.4E-44 335.4 24.0 200 425-628 1-220 (232)
251 cd03258 ABC_MetN_methionine_tr 100.0 5.1E-40 1.1E-44 336.4 23.3 201 424-628 1-228 (233)
252 PRK14274 phosphate ABC transpo 100.0 8.7E-40 1.9E-44 340.0 25.2 210 95-344 10-241 (259)
253 PRK14250 phosphate ABC transpo 100.0 6.8E-40 1.5E-44 337.2 24.0 197 424-623 3-215 (241)
254 PRK11264 putative amino-acid A 100.0 6.5E-40 1.4E-44 339.1 23.9 202 424-629 3-232 (250)
255 PRK14269 phosphate ABC transpo 100.0 9.7E-40 2.1E-44 337.1 25.1 208 97-343 2-227 (246)
256 PRK10851 sulfate/thiosulfate t 100.0 6.9E-40 1.5E-44 353.7 25.0 203 424-630 2-226 (353)
257 PRK13634 cbiO cobalt transport 100.0 6E-40 1.3E-44 346.4 24.1 203 425-629 3-234 (290)
258 PRK15112 antimicrobial peptide 100.0 6.8E-40 1.5E-44 342.2 24.1 207 423-630 3-239 (267)
259 PRK13641 cbiO cobalt transport 100.0 8.6E-40 1.9E-44 344.8 25.0 204 424-629 2-233 (287)
260 PRK13651 cobalt transporter AT 100.0 7.3E-40 1.6E-44 347.4 24.5 204 424-629 2-253 (305)
261 PRK13637 cbiO cobalt transport 100.0 9.6E-40 2.1E-44 344.3 25.3 205 424-630 2-234 (287)
262 cd03225 ABC_cobalt_CbiO_domain 100.0 4.7E-40 1E-44 331.4 21.9 190 426-617 1-211 (211)
263 cd03263 ABC_subfamily_A The AB 100.0 5.8E-40 1.3E-44 332.9 22.7 197 425-625 1-216 (220)
264 cd03262 ABC_HisP_GlnQ_permease 100.0 4.8E-40 1E-44 331.8 21.9 191 425-618 1-213 (213)
265 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 1E-39 2.3E-44 334.7 24.7 201 424-629 1-220 (236)
266 cd03297 ABC_ModC_molybdenum_tr 100.0 6.1E-40 1.3E-44 331.4 22.6 189 102-335 5-211 (214)
267 PRK15079 oligopeptide ABC tran 100.0 1.1E-39 2.3E-44 349.5 25.8 209 421-630 5-251 (331)
268 PRK14272 phosphate ABC transpo 100.0 1.1E-39 2.4E-44 337.8 25.1 208 97-343 4-233 (252)
269 TIGR01277 thiQ thiamine ABC tr 100.0 6.7E-40 1.5E-44 330.9 22.9 196 98-335 1-208 (213)
270 PRK14237 phosphate transporter 100.0 1.3E-39 2.7E-44 340.2 25.7 210 95-344 18-249 (267)
271 PRK13632 cbiO cobalt transport 100.0 6E-40 1.3E-44 343.3 23.2 206 96-343 6-228 (271)
272 cd03292 ABC_FtsE_transporter F 100.0 6.1E-40 1.3E-44 331.3 22.5 191 425-618 1-214 (214)
273 PRK09544 znuC high-affinity zi 100.0 7.6E-40 1.6E-44 338.4 23.6 198 96-343 3-206 (251)
274 PRK14271 phosphate ABC transpo 100.0 1.4E-39 3.1E-44 341.1 26.0 209 95-343 19-248 (276)
275 COG1117 PstB ABC-type phosphat 100.0 1.7E-40 3.7E-45 319.7 17.3 204 422-629 5-236 (253)
276 PRK14254 phosphate ABC transpo 100.0 1.9E-39 4E-44 341.7 26.8 209 93-343 35-266 (285)
277 PRK14270 phosphate ABC transpo 100.0 1.3E-39 2.8E-44 337.1 25.1 208 96-343 3-232 (251)
278 PRK13538 cytochrome c biogenes 100.0 5.4E-40 1.2E-44 329.4 21.5 190 97-329 1-202 (204)
279 COG4152 ABC-type uncharacteriz 100.0 2E-40 4.3E-45 324.6 17.8 204 97-341 2-214 (300)
280 PRK13631 cbiO cobalt transport 100.0 1.2E-39 2.6E-44 347.8 25.5 210 419-630 16-265 (320)
281 PRK10419 nikE nickel transport 100.0 1.1E-39 2.3E-44 340.8 24.5 206 96-340 2-235 (268)
282 TIGR00968 3a0106s01 sulfate AB 100.0 1.1E-39 2.3E-44 334.9 24.1 204 98-342 1-216 (237)
283 TIGR02324 CP_lyasePhnL phospho 100.0 7.4E-40 1.6E-44 333.1 22.8 194 97-329 1-222 (224)
284 TIGR03258 PhnT 2-aminoethylpho 100.0 1.1E-39 2.4E-44 352.6 25.4 203 424-630 5-228 (362)
285 PRK14253 phosphate ABC transpo 100.0 1.2E-39 2.5E-44 337.1 24.4 207 96-342 2-229 (249)
286 PRK14249 phosphate ABC transpo 100.0 1.5E-39 3.2E-44 336.7 25.2 207 96-342 3-231 (251)
287 PRK11124 artP arginine transpo 100.0 1E-39 2.3E-44 336.0 23.9 202 424-629 2-229 (242)
288 PRK11144 modC molybdate transp 100.0 9.5E-40 2.1E-44 353.4 24.8 195 98-342 2-214 (352)
289 PRK14262 phosphate ABC transpo 100.0 1.4E-39 3.1E-44 336.6 25.1 207 97-343 3-231 (250)
290 TIGR02211 LolD_lipo_ex lipopro 100.0 7.8E-40 1.7E-44 332.2 22.6 192 424-619 1-220 (221)
291 cd03224 ABC_TM1139_LivF_branch 100.0 7.8E-40 1.7E-44 332.4 22.5 200 425-628 1-219 (222)
292 PRK10584 putative ABC transpor 100.0 1.3E-39 2.8E-44 332.2 24.3 194 423-620 5-226 (228)
293 TIGR02769 nickel_nikE nickel i 100.0 1.2E-39 2.6E-44 340.0 24.5 205 424-629 2-239 (265)
294 PRK10575 iron-hydroxamate tran 100.0 1.1E-39 2.3E-44 340.4 24.1 204 422-629 9-236 (265)
295 PRK13647 cbiO cobalt transport 100.0 1.3E-39 2.9E-44 341.1 24.8 202 424-628 4-225 (274)
296 PRK11300 livG leucine/isoleuci 100.0 1.4E-39 3E-44 337.6 24.8 203 423-629 4-242 (255)
297 cd03260 ABC_PstB_phosphate_tra 100.0 9.3E-40 2E-44 333.1 22.9 193 425-621 1-221 (227)
298 cd03295 ABC_OpuCA_Osmoprotecti 100.0 1.2E-39 2.7E-44 335.4 24.0 201 425-628 1-223 (242)
299 PRK11607 potG putrescine trans 100.0 1.6E-39 3.4E-44 353.3 25.9 206 421-630 16-239 (377)
300 PRK11308 dppF dipeptide transp 100.0 1.9E-39 4.1E-44 347.2 26.2 207 422-629 3-243 (327)
301 COG0411 LivG ABC-type branched 100.0 2.5E-40 5.3E-45 326.8 17.6 206 423-630 3-239 (250)
302 PRK13646 cbiO cobalt transport 100.0 1.2E-39 2.6E-44 343.5 24.1 205 424-630 2-235 (286)
303 TIGR02323 CP_lyasePhnK phospho 100.0 1.7E-39 3.7E-44 336.6 24.8 206 423-629 2-237 (253)
304 PRK13633 cobalt transporter AT 100.0 1.1E-39 2.5E-44 342.8 23.6 207 96-344 3-231 (280)
305 PRK13648 cbiO cobalt transport 100.0 1.2E-39 2.5E-44 340.9 23.6 206 96-343 6-228 (269)
306 PRK13640 cbiO cobalt transport 100.0 1.2E-39 2.6E-44 342.8 23.8 207 96-344 4-230 (282)
307 PRK13638 cbiO cobalt transport 100.0 1.5E-39 3.2E-44 340.5 24.2 203 424-629 1-224 (271)
308 PRK13548 hmuV hemin importer A 100.0 2E-39 4.4E-44 336.9 25.0 203 424-630 2-230 (258)
309 PRK11629 lolD lipoprotein tran 100.0 1.9E-39 4.2E-44 332.1 24.4 194 423-620 4-225 (233)
310 TIGR03415 ABC_choXWV_ATP choli 100.0 7.6E-40 1.7E-44 354.6 22.5 203 101-344 28-252 (382)
311 TIGR01188 drrA daunorubicin re 100.0 1.1E-39 2.4E-44 346.4 23.2 195 432-630 1-213 (302)
312 TIGR02982 heterocyst_DevA ABC 100.0 1.4E-39 3.1E-44 330.2 22.9 197 98-334 2-219 (220)
313 TIGR01978 sufC FeS assembly AT 100.0 1.8E-39 3.9E-44 334.3 23.8 202 425-629 1-233 (243)
314 PRK09580 sufC cysteine desulfu 100.0 1.8E-39 3.9E-44 335.4 23.8 213 97-342 1-231 (248)
315 PRK14259 phosphate ABC transpo 100.0 2.4E-39 5.2E-44 338.4 25.0 196 95-331 11-228 (269)
316 cd03267 ABC_NatA_like Similar 100.0 9.8E-40 2.1E-44 334.9 21.7 191 105-335 29-233 (236)
317 TIGR02142 modC_ABC molybdenum 100.0 1.7E-39 3.7E-44 351.8 24.7 195 102-341 4-216 (354)
318 PRK14238 phosphate transporter 100.0 1.9E-39 4E-44 339.5 24.1 210 95-344 22-253 (271)
319 PRK11231 fecE iron-dicitrate t 100.0 1.8E-39 3.9E-44 336.8 23.7 203 424-630 2-227 (255)
320 cd03231 ABC_CcmA_heme_exporter 100.0 8.9E-40 1.9E-44 327.1 20.5 186 98-329 1-198 (201)
321 PRK09984 phosphonate/organopho 100.0 2.1E-39 4.6E-44 337.6 24.1 202 423-628 3-240 (262)
322 TIGR03005 ectoine_ehuA ectoine 100.0 2E-39 4.4E-44 335.8 23.8 202 425-630 1-236 (252)
323 PRK14275 phosphate ABC transpo 100.0 3E-39 6.5E-44 340.4 25.3 210 94-343 36-267 (286)
324 cd03298 ABC_ThiQ_thiamine_tran 100.0 2E-39 4.4E-44 326.9 22.9 191 425-620 1-209 (211)
325 PRK13547 hmuV hemin importer A 100.0 1.6E-39 3.4E-44 339.7 22.8 207 98-341 2-239 (272)
326 PRK14255 phosphate ABC transpo 100.0 3.2E-39 6.9E-44 334.4 24.9 202 97-337 5-228 (252)
327 TIGR00972 3a0107s01c2 phosphat 100.0 3.6E-39 7.8E-44 333.0 25.2 202 424-629 1-231 (247)
328 PRK13636 cbiO cobalt transport 100.0 3.5E-39 7.6E-44 339.5 25.5 205 423-630 4-231 (283)
329 PRK13642 cbiO cobalt transport 100.0 2.3E-39 5E-44 339.9 24.1 206 97-344 4-227 (277)
330 TIGR03410 urea_trans_UrtE urea 100.0 2.3E-39 5E-44 330.9 23.2 201 425-628 1-219 (230)
331 PRK10895 lipopolysaccharide AB 100.0 2.3E-39 5E-44 333.2 23.2 203 424-630 3-226 (241)
332 PRK10253 iron-enterobactin tra 100.0 3.9E-39 8.6E-44 336.1 25.0 204 422-629 5-232 (265)
333 COG3840 ThiQ ABC-type thiamine 100.0 9.6E-40 2.1E-44 306.7 18.1 203 424-632 1-221 (231)
334 PRK14246 phosphate ABC transpo 100.0 3.4E-39 7.5E-44 334.9 24.3 210 95-343 8-238 (257)
335 PRK13649 cbiO cobalt transport 100.0 3.3E-39 7.2E-44 339.4 24.5 203 425-629 3-233 (280)
336 PRK14260 phosphate ABC transpo 100.0 4.6E-39 9.9E-44 334.5 25.2 209 96-344 6-241 (259)
337 PRK15093 antimicrobial peptide 100.0 4.1E-39 8.9E-44 345.7 25.5 206 423-629 2-247 (330)
338 PRK10418 nikD nickel transport 100.0 4.9E-39 1.1E-43 333.4 25.3 205 97-344 4-228 (254)
339 COG4525 TauB ABC-type taurine 100.0 8.4E-40 1.8E-44 310.0 17.7 197 96-332 2-209 (259)
340 COG0410 LivF ABC-type branched 100.0 3.1E-39 6.7E-44 316.6 22.1 207 96-343 2-223 (237)
341 CHL00131 ycf16 sulfate ABC tra 100.0 3.4E-39 7.3E-44 334.2 23.6 213 96-341 6-236 (252)
342 PRK10771 thiQ thiamine transpo 100.0 4.7E-39 1E-43 329.0 24.3 201 424-630 1-219 (232)
343 PRK13645 cbiO cobalt transport 100.0 4.1E-39 8.8E-44 340.2 24.5 204 424-629 6-239 (289)
344 PRK13543 cytochrome c biogenes 100.0 3.8E-39 8.3E-44 325.7 23.2 193 420-615 7-212 (214)
345 PRK14236 phosphate transporter 100.0 6.2E-39 1.3E-43 335.9 25.5 210 95-344 23-254 (272)
346 COG4181 Predicted ABC-type tra 100.0 1.3E-39 2.9E-44 302.6 17.9 198 97-335 6-225 (228)
347 TIGR03740 galliderm_ABC gallid 100.0 4.7E-39 1E-43 327.0 23.5 196 425-624 1-207 (223)
348 PRK14244 phosphate ABC transpo 100.0 6E-39 1.3E-43 332.2 24.7 207 98-343 6-234 (251)
349 PRK14261 phosphate ABC transpo 100.0 7E-39 1.5E-43 332.1 25.1 209 95-343 4-234 (253)
350 PRK14242 phosphate transporter 100.0 5.4E-39 1.2E-43 332.9 24.3 204 422-629 4-236 (253)
351 cd03245 ABCC_bacteriocin_expor 100.0 2.6E-39 5.5E-44 328.2 21.2 200 97-335 2-217 (220)
352 PRK14247 phosphate ABC transpo 100.0 8.7E-39 1.9E-43 330.7 25.3 203 424-629 3-233 (250)
353 PRK13652 cbiO cobalt transport 100.0 7.2E-39 1.6E-43 336.2 24.9 205 423-630 2-227 (277)
354 PRK10261 glutathione transport 100.0 4.8E-39 1E-43 372.7 25.8 210 95-343 311-550 (623)
355 COG1123 ATPase components of v 100.0 4E-39 8.6E-44 353.8 23.5 208 94-340 277-513 (539)
356 PRK14248 phosphate ABC transpo 100.0 9.2E-39 2E-43 333.9 25.2 206 420-629 17-251 (268)
357 TIGR03873 F420-0_ABC_ATP propo 100.0 5.8E-39 1.2E-43 333.2 23.4 201 425-629 2-225 (256)
358 PRK11614 livF leucine/isoleuci 100.0 4.7E-39 1E-43 330.1 22.5 202 423-628 4-224 (237)
359 PRK10070 glycine betaine trans 100.0 6.4E-39 1.4E-43 349.7 24.7 199 428-630 32-254 (400)
360 PRK11022 dppD dipeptide transp 100.0 8E-39 1.7E-43 342.5 25.0 205 424-629 3-242 (326)
361 PRK14258 phosphate ABC transpo 100.0 9.8E-39 2.1E-43 332.4 24.9 208 96-343 6-242 (261)
362 PRK13639 cbiO cobalt transport 100.0 8E-39 1.7E-43 335.5 24.3 204 424-630 1-226 (275)
363 PRK14268 phosphate ABC transpo 100.0 1.1E-38 2.4E-43 331.5 25.1 205 421-629 9-241 (258)
364 cd03294 ABC_Pro_Gly_Bertaine T 100.0 3.5E-39 7.5E-44 337.2 21.4 200 426-629 26-249 (269)
365 PRK15056 manganese/iron transp 100.0 4.1E-39 9E-44 337.2 22.0 209 97-343 6-227 (272)
366 PRK14243 phosphate transporter 100.0 9.2E-39 2E-43 333.1 24.4 206 96-343 9-245 (264)
367 PRK09473 oppD oligopeptide tra 100.0 1.4E-38 3.1E-43 340.9 26.5 210 420-630 8-251 (330)
368 PRK14267 phosphate ABC transpo 100.0 1E-38 2.2E-43 330.8 24.4 204 423-629 3-236 (253)
369 PRK14265 phosphate ABC transpo 100.0 1.8E-38 3.9E-43 332.6 26.1 207 95-343 18-255 (274)
370 PRK14257 phosphate ABC transpo 100.0 1.2E-38 2.7E-43 341.0 25.3 210 95-344 78-311 (329)
371 cd03230 ABC_DR_subfamily_A Thi 100.0 6E-39 1.3E-43 313.5 20.9 160 98-333 1-172 (173)
372 cd03254 ABCC_Glucan_exporter_l 100.0 5.6E-39 1.2E-43 327.7 21.6 207 98-344 3-224 (229)
373 cd03252 ABCC_Hemolysin The ABC 100.0 3.9E-39 8.5E-44 330.6 20.5 207 98-344 1-223 (237)
374 cd03251 ABCC_MsbA MsbA is an e 100.0 6E-39 1.3E-43 328.6 21.7 207 98-344 1-223 (234)
375 PRK13650 cbiO cobalt transport 100.0 1.1E-38 2.4E-43 335.0 24.2 202 424-629 4-228 (279)
376 COG4175 ProV ABC-type proline/ 100.0 2.4E-39 5.1E-44 327.6 18.2 209 97-346 4-254 (386)
377 PRK14273 phosphate ABC transpo 100.0 1.8E-38 3.8E-43 329.2 25.2 204 422-629 5-237 (254)
378 cd03300 ABC_PotA_N PotA is an 100.0 1.3E-38 2.8E-43 325.8 23.8 200 425-628 1-218 (232)
379 PRK14252 phosphate ABC transpo 100.0 2.4E-38 5.3E-43 330.2 26.3 208 95-343 14-246 (265)
380 PRK10744 pstB phosphate transp 100.0 2E-38 4.4E-43 329.9 25.4 204 422-629 11-243 (260)
381 PRK14266 phosphate ABC transpo 100.0 1.7E-38 3.8E-43 328.5 24.7 208 97-344 3-232 (250)
382 PRK10419 nikE nickel transport 100.0 1.4E-38 3.1E-43 332.3 24.3 198 423-620 2-232 (268)
383 PRK09544 znuC high-affinity zi 100.0 1.3E-38 2.9E-43 329.1 23.8 200 423-629 3-208 (251)
384 cd03297 ABC_ModC_molybdenum_tr 100.0 1.2E-38 2.6E-43 322.0 22.8 189 425-620 2-212 (214)
385 cd03220 ABC_KpsT_Wzt ABC_KpsT_ 100.0 5.8E-39 1.3E-43 326.6 20.5 196 98-335 23-221 (224)
386 PRK15439 autoinducer 2 ABC tra 100.0 1.5E-38 3.2E-43 361.3 26.1 205 422-630 9-229 (510)
387 PRK13538 cytochrome c biogenes 100.0 8.8E-39 1.9E-43 320.6 21.5 187 424-613 1-202 (204)
388 PRK11144 modC molybdate transp 100.0 1.5E-38 3.2E-43 344.2 24.7 200 424-630 1-218 (352)
389 PRK14241 phosphate transporter 100.0 2.3E-38 5.1E-43 329.1 25.3 203 424-629 4-241 (258)
390 PRK10247 putative ABC transpor 100.0 8.4E-39 1.8E-43 325.7 21.5 198 422-625 5-222 (225)
391 COG4598 HisP ABC-type histidin 100.0 1.4E-39 3E-44 304.5 14.3 209 95-343 4-238 (256)
392 PRK13644 cbiO cobalt transport 100.0 1.6E-38 3.6E-43 332.9 24.1 203 424-630 1-224 (274)
393 COG2274 SunT ABC-type bacterio 100.0 8.7E-39 1.9E-43 368.5 24.1 214 94-345 468-695 (709)
394 cd03229 ABC_Class3 This class 100.0 8.3E-39 1.8E-43 313.9 20.2 162 98-333 1-178 (178)
395 cd03248 ABCC_TAP TAP, the Tran 100.0 3.6E-39 7.8E-44 328.5 18.2 200 95-333 9-225 (226)
396 PRK14235 phosphate transporter 100.0 2.7E-38 6E-43 330.1 25.3 205 421-629 16-250 (267)
397 PRK10418 nikD nickel transport 100.0 2.4E-38 5.3E-43 328.2 24.7 205 424-630 4-230 (254)
398 TIGR01184 ntrCD nitrate transp 100.0 7E-39 1.5E-43 327.3 20.1 185 113-335 1-194 (230)
399 cd03223 ABCD_peroxisomal_ALDP 100.0 1.2E-38 2.7E-43 309.1 20.8 162 98-332 1-163 (166)
400 PRK14245 phosphate ABC transpo 100.0 2.8E-38 6.2E-43 326.9 24.8 204 423-630 2-234 (250)
401 PRK14254 phosphate ABC transpo 100.0 3.5E-38 7.5E-43 332.0 25.8 205 420-628 35-267 (285)
402 TIGR01186 proV glycine betaine 100.0 1.4E-38 2.9E-43 343.4 23.1 195 432-630 1-219 (363)
403 TIGR03269 met_CoM_red_A2 methy 100.0 1.8E-38 3.8E-43 361.9 25.3 207 95-342 277-513 (520)
404 TIGR01277 thiQ thiamine ABC tr 100.0 2.4E-38 5.2E-43 319.6 23.5 192 425-621 1-210 (213)
405 PRK13635 cbiO cobalt transport 100.0 2.6E-38 5.7E-43 332.0 24.5 203 423-629 4-228 (279)
406 cd03245 ABCC_bacteriocin_expor 100.0 1.7E-38 3.7E-43 322.2 22.2 191 425-620 3-218 (220)
407 PRK13539 cytochrome c biogenes 100.0 1.4E-38 3E-43 319.9 21.3 189 97-331 2-200 (207)
408 cd03234 ABCG_White The White s 100.0 1.6E-38 3.4E-43 323.8 21.9 201 98-335 4-223 (226)
409 COG0444 DppD ABC-type dipeptid 100.0 3E-38 6.4E-43 324.9 23.8 206 98-342 2-239 (316)
410 PRK14239 phosphate transporter 100.0 3.9E-38 8.4E-43 326.3 24.9 203 423-629 4-235 (252)
411 PRK14256 phosphate ABC transpo 100.0 4.6E-38 1E-42 325.7 25.5 204 423-629 3-235 (252)
412 cd03250 ABCC_MRP_domain1 Domai 100.0 1.7E-38 3.7E-43 318.5 21.4 195 98-333 1-204 (204)
413 TIGR01189 ccmA heme ABC export 100.0 1.2E-38 2.7E-43 318.0 20.3 185 98-328 1-197 (198)
414 PRK14269 phosphate ABC transpo 100.0 3E-38 6.6E-43 325.9 23.8 201 424-628 2-228 (246)
415 PRK13540 cytochrome c biogenes 100.0 1.2E-38 2.6E-43 318.6 20.0 183 98-326 2-196 (200)
416 PRK14274 phosphate ABC transpo 100.0 4.8E-38 1E-42 326.9 25.1 206 421-630 9-243 (259)
417 cd03231 ABC_CcmA_heme_exporter 100.0 2E-38 4.3E-43 317.4 21.3 186 425-613 1-198 (201)
418 PRK14264 phosphate ABC transpo 100.0 5.3E-38 1.2E-42 333.8 25.7 223 93-344 41-287 (305)
419 PRK14259 phosphate ABC transpo 100.0 5.3E-38 1.1E-42 328.2 25.1 193 420-615 9-228 (269)
420 PLN03073 ABC transporter F fam 100.0 4.9E-38 1.1E-42 366.2 27.5 219 421-639 174-440 (718)
421 PRK14251 phosphate ABC transpo 100.0 4.2E-38 9.1E-43 325.8 24.0 202 423-628 3-233 (251)
422 PRK14255 phosphate ABC transpo 100.0 5.5E-38 1.2E-42 325.2 24.9 204 422-628 3-235 (252)
423 PRK14272 phosphate ABC transpo 100.0 6.3E-38 1.4E-42 324.7 25.4 203 424-629 4-235 (252)
424 cd03220 ABC_KpsT_Wzt ABC_KpsT_ 100.0 1.4E-38 3E-43 323.8 20.0 191 425-620 23-222 (224)
425 PRK11174 cysteine/glutathione 100.0 6.1E-38 1.3E-42 362.8 28.1 209 97-346 349-572 (588)
426 PRK13547 hmuV hemin importer A 100.0 4.4E-38 9.6E-43 328.8 24.1 201 424-628 1-242 (272)
427 PRK09700 D-allose transporter 100.0 2.4E-38 5.2E-43 359.9 24.0 204 423-630 4-234 (510)
428 PRK14270 phosphate ABC transpo 100.0 6E-38 1.3E-42 324.7 24.9 203 422-628 2-233 (251)
429 PRK14275 phosphate ABC transpo 100.0 7.5E-38 1.6E-42 329.8 25.9 205 420-628 35-268 (286)
430 PRK14240 phosphate transporter 100.0 7.2E-38 1.6E-42 323.9 25.3 202 424-629 3-233 (250)
431 PRK13633 cobalt transporter AT 100.0 4E-38 8.8E-43 331.0 23.6 203 423-629 3-232 (280)
432 PRK13632 cbiO cobalt transport 100.0 4.4E-38 9.5E-43 329.3 23.6 202 423-628 6-229 (271)
433 cd03299 ABC_ModC_like Archeal 100.0 6E-38 1.3E-42 321.5 24.1 200 425-629 1-218 (235)
434 PRK15056 manganese/iron transp 100.0 3.5E-38 7.6E-43 330.2 22.8 202 424-628 6-228 (272)
435 KOG0058 Peptide exporter, ABC 100.0 1.5E-38 3.2E-43 353.8 21.0 207 421-632 462-693 (716)
436 PRK14238 phosphate transporter 100.0 5.8E-38 1.2E-42 328.3 24.3 207 419-629 19-254 (271)
437 cd03249 ABC_MTABC3_MDL1_MDL2 M 100.0 1.9E-38 4E-43 325.8 20.0 206 98-343 1-223 (238)
438 TIGR00968 3a0106s01 sulfate AB 100.0 7.7E-38 1.7E-42 321.1 24.2 201 425-629 1-219 (237)
439 cd03267 ABC_NatA_like Similar 100.0 3.9E-38 8.3E-43 323.1 21.9 187 432-620 29-234 (236)
440 PRK14237 phosphate transporter 100.0 1E-37 2.3E-42 325.7 25.5 204 422-629 18-250 (267)
441 TIGR03608 L_ocin_972_ABC putat 100.0 3.2E-38 7E-43 316.8 20.7 183 427-613 1-206 (206)
442 PRK14262 phosphate ABC transpo 100.0 9.7E-38 2.1E-42 322.9 24.8 203 423-629 2-233 (250)
443 cd03254 ABCC_Glucan_exporter_l 100.0 5.8E-38 1.3E-42 320.2 22.7 200 425-630 3-226 (229)
444 cd03244 ABCC_MRP_domain2 Domai 100.0 3.8E-38 8.2E-43 319.9 21.1 200 98-335 3-216 (221)
445 cd03289 ABCC_CFTR2 The CFTR su 100.0 4.2E-38 9.2E-43 328.7 22.0 197 98-345 3-224 (275)
446 cd03253 ABCC_ATM1_transporter 100.0 4.7E-38 1E-42 322.4 21.9 206 98-343 1-221 (236)
447 cd03247 ABCC_cytochrome_bd The 100.0 4.1E-38 8.9E-43 309.0 20.5 162 98-335 1-175 (178)
448 COG2274 SunT ABC-type bacterio 100.0 1.3E-37 2.8E-42 358.8 27.9 206 421-631 468-697 (709)
449 PRK15134 microcin C ABC transp 100.0 3.8E-38 8.3E-43 359.7 23.4 211 95-344 273-513 (529)
450 cd03214 ABC_Iron-Siderophores_ 100.0 2.9E-38 6.3E-43 310.6 19.2 174 426-620 1-178 (180)
451 TIGR03796 NHPM_micro_ABC1 NHPM 100.0 4.2E-38 9.1E-43 371.6 24.1 212 96-345 476-699 (710)
452 PRK10762 D-ribose transporter 100.0 4.7E-38 1E-42 356.7 23.6 201 423-627 3-227 (501)
453 KOG0055 Multidrug/pheromone ex 100.0 4.3E-38 9.3E-43 367.9 23.8 245 57-345 949-1212(1228)
454 CHL00131 ycf16 sulfate ABC tra 100.0 1.2E-37 2.5E-42 322.7 24.2 201 423-626 6-237 (252)
455 TIGR02142 modC_ABC molybdenum 100.0 1E-37 2.2E-42 338.1 24.6 195 429-629 4-220 (354)
456 TIGR02982 heterocyst_DevA ABC 100.0 1.1E-37 2.5E-42 316.2 23.5 191 424-618 1-219 (220)
457 PRK13640 cbiO cobalt transport 100.0 1.2E-37 2.7E-42 327.6 24.5 205 422-630 3-232 (282)
458 PRK14271 phosphate ABC transpo 100.0 1.8E-37 3.9E-42 325.2 25.7 204 422-629 19-250 (276)
459 PRK13546 teichoic acids export 100.0 3E-37 6.4E-42 321.0 27.0 204 98-345 5-231 (264)
460 PRK13545 tagH teichoic acids e 100.0 1.9E-37 4.2E-42 341.8 27.0 206 96-345 20-231 (549)
461 TIGR03797 NHPM_micro_ABC2 NHPM 100.0 5.5E-38 1.2E-42 369.1 24.3 211 96-345 450-672 (686)
462 PRK13648 cbiO cobalt transport 100.0 1.1E-37 2.4E-42 325.9 23.9 204 422-629 5-230 (269)
463 PRK14263 phosphate ABC transpo 100.0 2.1E-37 4.7E-42 322.1 25.8 207 96-344 7-243 (261)
464 cd03246 ABCC_Protease_Secretio 100.0 5.3E-38 1.2E-42 306.8 20.0 157 98-333 1-172 (173)
465 PRK14265 phosphate ABC transpo 100.0 1.9E-37 4.1E-42 324.8 25.5 206 420-629 16-257 (274)
466 COG4988 CydD ABC-type transpor 100.0 5.6E-38 1.2E-42 343.3 22.2 207 98-344 321-541 (559)
467 KOG0057 Mitochondrial Fe/S clu 100.0 5.8E-38 1.3E-42 337.9 21.9 201 424-630 351-574 (591)
468 cd03369 ABCC_NFT1 Domain 2 of 100.0 9.8E-38 2.1E-42 313.7 22.2 184 96-335 5-202 (207)
469 PRK14249 phosphate ABC transpo 100.0 1.9E-37 4.1E-42 321.0 25.0 202 423-628 3-233 (251)
470 COG1137 YhbG ABC-type (unclass 100.0 6.5E-39 1.4E-43 305.5 12.9 204 423-630 3-228 (243)
471 cd03215 ABC_Carb_Monos_II This 100.0 5.6E-38 1.2E-42 309.2 19.9 161 97-333 4-181 (182)
472 COG4152 ABC-type uncharacteriz 100.0 2.7E-38 5.9E-43 309.6 17.3 203 424-630 2-219 (300)
473 cd03289 ABCC_CFTR2 The CFTR su 100.0 2.5E-37 5.4E-42 322.9 25.8 198 425-630 3-225 (275)
474 COG0410 LivF ABC-type branched 100.0 1.4E-37 2.9E-42 305.1 22.2 205 423-630 2-226 (237)
475 cd03213 ABCG_EPDR ABCG transpo 100.0 1E-37 2.2E-42 310.5 21.7 170 97-335 3-191 (194)
476 PRK14236 phosphate transporter 100.0 2.4E-37 5.1E-42 323.9 25.5 205 421-629 22-255 (272)
477 TIGR02770 nickel_nikD nickel i 100.0 9.8E-38 2.1E-42 318.9 22.0 193 112-344 1-213 (230)
478 PRK13642 cbiO cobalt transport 100.0 1.9E-37 4.2E-42 325.3 24.8 203 424-630 4-229 (277)
479 PRK14253 phosphate ABC transpo 100.0 2.2E-37 4.8E-42 320.0 24.7 201 424-628 3-231 (249)
480 PRK14244 phosphate ABC transpo 100.0 1.6E-37 3.5E-42 321.4 23.8 201 425-629 6-236 (251)
481 KOG0057 Mitochondrial Fe/S clu 100.0 6.4E-38 1.4E-42 337.6 21.4 210 96-346 350-574 (591)
482 cd03232 ABC_PDR_domain2 The pl 100.0 9.1E-38 2E-42 310.3 20.9 170 97-335 3-189 (192)
483 cd03252 ABCC_Hemolysin The ABC 100.0 1.4E-37 3E-42 319.1 22.8 200 425-630 1-225 (237)
484 PRK14257 phosphate ABC transpo 100.0 2.2E-37 4.8E-42 331.3 25.3 209 418-630 74-313 (329)
485 cd03251 ABCC_MsbA MsbA is an e 100.0 1.6E-37 3.5E-42 318.0 23.1 199 425-629 1-224 (234)
486 PRK09580 sufC cysteine desulfu 100.0 2.1E-37 4.6E-42 319.9 23.9 200 424-626 1-231 (248)
487 PRK11288 araG L-arabinose tran 100.0 1.2E-37 2.6E-42 353.3 24.1 195 423-620 3-220 (501)
488 PRK13549 xylose transporter AT 100.0 1.3E-37 2.8E-42 353.5 24.4 202 423-628 4-230 (506)
489 PRK14258 phosphate ABC transpo 100.0 2.8E-37 6.1E-42 321.5 24.7 202 424-629 7-244 (261)
490 PRK10790 putative multidrug tr 100.0 2E-37 4.3E-42 358.8 26.2 211 96-345 339-562 (592)
491 cd03214 ABC_Iron-Siderophores_ 100.0 3.8E-38 8.2E-43 309.8 17.1 173 99-335 1-177 (180)
492 PRK14243 phosphate transporter 100.0 2.5E-37 5.4E-42 322.3 24.1 203 423-629 9-247 (264)
493 COG4181 Predicted ABC-type tra 100.0 6.4E-38 1.4E-42 291.4 17.4 193 424-620 6-226 (228)
494 cd03290 ABCC_SUR1_N The SUR do 100.0 1.6E-37 3.4E-42 314.8 21.7 196 99-332 2-217 (218)
495 TIGR02324 CP_lyasePhnL phospho 100.0 1.9E-37 4.2E-42 315.4 22.2 189 424-614 1-223 (224)
496 PRK11176 lipid transporter ATP 100.0 2.7E-37 5.7E-42 357.2 26.2 212 97-345 341-566 (582)
497 cd03215 ABC_Carb_Monos_II This 100.0 1.4E-37 3E-42 306.3 20.2 166 422-618 2-182 (182)
498 PRK14264 phosphate ABC transpo 100.0 4.5E-37 9.7E-42 326.7 25.6 212 414-629 35-288 (305)
499 PRK10938 putative molybdenum t 100.0 1.2E-37 2.6E-42 352.6 22.6 202 424-629 3-223 (490)
500 PRK14260 phosphate ABC transpo 100.0 4.3E-37 9.3E-42 319.7 24.8 203 423-629 6-242 (259)
No 1
>COG0488 Uup ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]
Probab=100.00 E-value=4.3e-103 Score=874.27 Aligned_cols=522 Identities=42% Similarity=0.715 Sum_probs=456.9
Q ss_pred CcEEEEeEEEEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCCceEEEEcccCccCCC
Q 005532 96 SGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSNMKIAFLSQEFEVSMS 175 (692)
Q Consensus 96 ~~l~i~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~~~i~~v~Q~~~~~~~ 175 (692)
.+|+++|++++|+++++|+++||+|.+|+++||||+|||||||||++|+|.+.|++|+|... .+.+|+|++|++.....
T Consensus 2 ~~i~~~~ls~~~g~~~l~~~~~l~~~~G~riGLvG~NGaGKSTLLkilaG~~~~~~G~i~~~-~~~~v~~l~Q~~~~~~~ 80 (530)
T COG0488 2 SMITLENLSLAYGDRPLLENVSLTLNPGERIGLVGRNGAGKSTLLKILAGELEPDSGEVTRP-KGLRVGYLSQEPPLDPE 80 (530)
T ss_pred ceEEEeeeEEeeCCceeecCCcceeCCCCEEEEECCCCCCHHHHHHHHcCCCcCCCCeEeec-CCceEEEeCCCCCcCCC
Confidence 46999999999999999999999999999999999999999999999999999999999987 45799999999998888
Q ss_pred CCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHHhhhcCCCcccccc
Q 005532 176 RTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFTADDGDR 255 (692)
Q Consensus 176 ~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl~~~~~~~ 255 (692)
.||.+.+..++.+......+++.+...+... ....+..+......++.|.++.++..+|..+|++.. ++
T Consensus 81 ~tv~~~v~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~l~~~~~~~~~~~~e~~~~~~L~gLg~~~~--~~ 149 (530)
T COG0488 81 KTVLDYVIEGFGELRELLAELEEAYALLADP---------DDELLAELEALLEELDGWTLEARAEEALLGLGFPDE--DR 149 (530)
T ss_pred ccHHHHHHhhhHHHHHHHHHHHHHHHhcccc---------hhHHHHHHHHHHHhhcccchHHHHHHHHhcCCCCcc--cC
Confidence 8999999887766555544444443322211 112333444555667789999999999999999854 89
Q ss_pred ccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHccCCCeEEEEecCHHHHHhhcCeEEEEecceEE
Q 005532 256 LVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGKQDVPMVIISHDRAFLDQLCTKIVETEMGVSR 335 (692)
Q Consensus 256 ~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~~~~tvI~vsHd~~~l~~~~d~i~~l~~G~~~ 335 (692)
++.+||||||+||+||+||+.+||||||||||||||.++++||+++|+++..|||+||||++|++.+|++|++++.|++.
T Consensus 150 ~~~~LSGG~r~Rv~LA~aL~~~pDlLLLDEPTNHLD~~~i~WLe~~L~~~~gtviiVSHDR~FLd~V~t~I~~ld~g~l~ 229 (530)
T COG0488 150 PVSSLSGGWRRRVALARALLEEPDLLLLDEPTNHLDLESIEWLEDYLKRYPGTVIVVSHDRYFLDNVATHILELDRGKLT 229 (530)
T ss_pred chhhcCHHHHHHHHHHHHHhcCCCEEEEcCCCcccCHHHHHHHHHHHHhCCCcEEEEeCCHHHHHHHhhheEEecCCcee
Confidence 99999999999999999999999999999999999999999999999887669999999999999999999999999999
Q ss_pred EeccChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcc-hhhhHHHHHHHHHHHHhhhccccc-ccceeee
Q 005532 336 TYEGNYSQYVLEKAAWIESQYAAWEKQQREIEQTKDLINRLGAGANS-GRASSAEKKLERLQEEEQIEKPFQ-RKQMKIR 413 (692)
Q Consensus 336 ~~~G~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~-~~~~~~~~~l~rl~~~~~~~~~~~-~~~~~~~ 413 (692)
.|.|||+.|..++.+....+...+.++++.++++.+++++....+++ .++.++.++++++.......++.. .....+.
T Consensus 230 ~y~Gny~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~i~r~~~~~~~~k~a~sr~k~l~k~~~~~~~~~~~~~~~~~~~~ 309 (530)
T COG0488 230 PYKGNYSSYLEQKAERLRQEAAAYEKQQKELAKEQEWIRRGKAAASKAKKAKSRIKRLEKLEARLAEERPVEEGKPLAFR 309 (530)
T ss_pred EecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHhhhhhcccccccccceee
Confidence 99999999999999999888899999999999999999997664332 466777777888774322223322 3334456
Q ss_pred cCCCC-CCCCceEEEEeEEEEcCC-eecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccceee
Q 005532 414 FPERG-RSGRSVVTIKNLEFGYED-RLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPN 491 (692)
Q Consensus 414 ~~~~~-~~~~~~l~~~~l~~~y~~-~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~~~~ 491 (692)
|++.. ..++.+++++|+++.|++ +.+++++||.|.+|++||||||||+|||||||+|+|...|.+|+|.++ ..+..+
T Consensus 310 f~~~~~~~g~~vl~~~~~~~~y~~~~~l~~~~s~~i~~g~riaiiG~NG~GKSTLlk~l~g~~~~~~G~v~~g-~~v~ig 388 (530)
T COG0488 310 FPPPGKRLGKLVLEFENVSKGYDGGRLLLKDLSFRIDRGDRIAIVGPNGAGKSTLLKLLAGELGPLSGTVKVG-ETVKIG 388 (530)
T ss_pred ccCCcccCCCeeEEEeccccccCCCceeecCceEEecCCCEEEEECCCCCCHHHHHHHHhhhcccCCceEEeC-CceEEE
Confidence 66655 478899999999999966 689999999999999999999999999999999999999999999985 568899
Q ss_pred eecccchhhcCCCccHHHHHHHHhccccHHHHHHHHhhcCCCcccccccCCCCCHHHHHHHHHHHHhccCCcEEEEeCCC
Q 005532 492 YFEQNQAEALDLDKTVLETVAEAAEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPT 571 (692)
Q Consensus 492 ~~~q~~~~~l~~~~tv~e~~~~~~~~~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~LAral~~~p~lLlLDEPT 571 (692)
||.|+.... +++.|+.+++...........++.+|++|+|+.+...+++..||||||.||.||++++.+|+||||||||
T Consensus 389 yf~Q~~~~l-~~~~t~~d~l~~~~~~~~e~~~r~~L~~f~F~~~~~~~~v~~LSGGEk~Rl~La~ll~~~pNvLiLDEPT 467 (530)
T COG0488 389 YFDQHRDEL-DPDKTVLEELSEGFPDGDEQEVRAYLGRFGFTGEDQEKPVGVLSGGEKARLLLAKLLLQPPNLLLLDEPT 467 (530)
T ss_pred EEEehhhhc-CccCcHHHHHHhhCccccHHHHHHHHHHcCCChHHHhCchhhcCHhHHHHHHHHHHhccCCCEEEEcCCC
Confidence 999986443 3788999999887655446789999999999999999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHhcCceEEEEecCHHHHHhhccEEEEEECCEEEEecCChhHHHHHh
Q 005532 572 NHLDIPSKEMLEEAISEYKGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYYLEKN 632 (692)
Q Consensus 572 n~LD~~~~~~l~~~l~~~~~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~~~~~~~ 632 (692)
||||+++++.|.++|.+|.||||+||||++|++++|++||++++ ++..|.|+|++|.+.+
T Consensus 468 NhLDi~s~~aLe~aL~~f~Gtvl~VSHDr~Fl~~va~~i~~~~~-~~~~~~g~y~~y~~~~ 527 (530)
T COG0488 468 NHLDIESLEALEEALLDFEGTVLLVSHDRYFLDRVATRIWLVED-KVEEFEGGYEDYLEQK 527 (530)
T ss_pred ccCCHHHHHHHHHHHHhCCCeEEEEeCCHHHHHhhcceEEEEcC-ceeEcCCCHHHHHHhh
Confidence 99999999999999999999999999999999999999999999 9999999999998743
No 2
>PRK10636 putative ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.3e-92 Score=818.03 Aligned_cols=516 Identities=31% Similarity=0.542 Sum_probs=418.9
Q ss_pred cEEEEeEEEEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCCceEEEEcccCccCCCC
Q 005532 97 GVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSNMKIAFLSQEFEVSMSR 176 (692)
Q Consensus 97 ~l~i~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~~~i~~v~Q~~~~~~~~ 176 (692)
+|+++|++++|+++++|+||||+|++|+++||||||||||||||++|+|+++|++|+|.+++ ...|+|++|++.. ...
T Consensus 1 ~i~i~nls~~~g~~~~l~~vs~~i~~Ge~v~LvG~NGsGKSTLLkiL~G~~~pd~G~I~~~~-~~~i~~~~q~~~~-~~~ 78 (638)
T PRK10636 1 MIVFSSLQIRRGVRVLLDNATATINPGQKVGLVGKNGCGKSTLLALLKNEISADGGSYTFPG-NWQLAWVNQETPA-LPQ 78 (638)
T ss_pred CEEEEEEEEEeCCceeecCcEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEecC-CCEEEEEecCCCC-CCC
Confidence 38899999999999999999999999999999999999999999999999999999999985 4579999997543 245
Q ss_pred CHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHHhhhcCCCccccccc
Q 005532 177 TVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFTADDGDRL 256 (692)
Q Consensus 177 Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl~~~~~~~~ 256 (692)
|+.+++...+.........+. ..... ... ..+..+.......+.+..+.++..+|+.+||.....+++
T Consensus 79 ~~~~~v~~~~~~~~~l~~~~~----~~~~~-~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~L~~lgl~~~~~~~~ 146 (638)
T PRK10636 79 PALEYVIDGDREYRQLEAQLH----DANER-NDG-------HAIATIHGKLDAIDAWTIRSRAASLLHGLGFSNEQLERP 146 (638)
T ss_pred CHHHHHHHhhHHHHHHHHHHH----HHhcc-CCH-------HHHHHHHHHHHhcCCcchHHHHHHHHHhCCCCchhhcCc
Confidence 777766432211100000000 00000 000 001111111223456677889999999999975567899
Q ss_pred cccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHccCCCeEEEEecCHHHHHhhcCeEEEEecceEEE
Q 005532 257 VASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGKQDVPMVIISHDRAFLDQLCTKIVETEMGVSRT 336 (692)
Q Consensus 257 ~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~~~~tvI~vsHd~~~l~~~~d~i~~l~~G~~~~ 336 (692)
+.+|||||||||+||+||+.+|+||||||||||||+.++.||.++|++.++|||+||||++++..+||+|+++++|++..
T Consensus 147 ~~~LSgGerqRv~LA~aL~~~P~lLLLDEPtn~LD~~~~~~L~~~L~~~~~tviivsHd~~~l~~~~d~i~~L~~G~i~~ 226 (638)
T PRK10636 147 VSDFSGGWRMRLNLAQALICRSDLLLLDEPTNHLDLDAVIWLEKWLKSYQGTLILISHDRDFLDPIVDKIIHIEQQSLFE 226 (638)
T ss_pred hhhcCHHHHHHHHHHHHHccCCCEEEEcCCCCcCCHHHHHHHHHHHHhCCCeEEEEeCCHHHHHHhcCEEEEEeCCEEEE
Confidence 99999999999999999999999999999999999999999999999888999999999999999999999999999988
Q ss_pred eccChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC-cchhhhHHHHHHHHHHHHhhhcccccccceeeecC
Q 005532 337 YEGNYSQYVLEKAAWIESQYAAWEKQQREIEQTKDLINRLGAGA-NSGRASSAEKKLERLQEEEQIEKPFQRKQMKIRFP 415 (692)
Q Consensus 337 ~~G~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~-~~~~~~~~~~~l~rl~~~~~~~~~~~~~~~~~~~~ 415 (692)
|.|+|+.|...+......+...++++++.+++..+++.++...+ .+.++.++.++++++.. ..++.......+.||
T Consensus 227 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~~~a~~~~~a~~r~~~l~~~~~---~~~~~~~~~~~~~~~ 303 (638)
T PRK10636 227 YTGNYSSFEVQRATRLAQQQAMYESQQERVAHLQSYIDRFRAKATKAKQAQSRIKMLERMEL---IAPAHVDNPFHFSFR 303 (638)
T ss_pred ecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHhhc---ccccccCCceeEecC
Confidence 99999999988877777777888899999999999998754321 12233444555555432 111111233455666
Q ss_pred CCCCCCCceEEEEeEEEEcCCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccceeeeecc
Q 005532 416 ERGRSGRSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQ 495 (692)
Q Consensus 416 ~~~~~~~~~l~~~~l~~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~~~~~~~q 495 (692)
++..+++++|+++||++.|+++.+|+++||+|.+|+++||+|||||||||||++|+|+++|++|+|.+++ .+..+|++|
T Consensus 304 ~~~~~~~~~l~~~~l~~~y~~~~il~~isl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~p~~G~i~~~~-~~~igy~~Q 382 (638)
T PRK10636 304 APESLPNPLLKMEKVSAGYGDRIILDSIKLNLVPGSRIGLLGRNGAGKSTLIKLLAGELAPVSGEIGLAK-GIKLGYFAQ 382 (638)
T ss_pred CCccCCCceEEEEeeEEEeCCeeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECC-CEEEEEecC
Confidence 5555678899999999999988999999999999999999999999999999999999999999999964 356789988
Q ss_pred cchhhcCCCccHHHHHHHHhccccHHHHHHHHhhcCCCcccccccCCCCCHHHHHHHHHHHHhccCCcEEEEeCCCCCCC
Q 005532 496 NQAEALDLDKTVLETVAEAAEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLD 575 (692)
Q Consensus 496 ~~~~~l~~~~tv~e~~~~~~~~~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~LAral~~~p~lLlLDEPTn~LD 575 (692)
.....+.+..++.+++...........+..+|+.|+|.....++++.+|||||||||+||++|+.+|+||||||||||||
T Consensus 383 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGekqRl~La~~l~~~p~lLlLDEPt~~LD 462 (638)
T PRK10636 383 HQLEFLRADESPLQHLARLAPQELEQKLRDYLGGFGFQGDKVTEETRRFSGGEKARLVLALIVWQRPNLLLLDEPTNHLD 462 (638)
T ss_pred cchhhCCccchHHHHHHHhCchhhHHHHHHHHHHcCCChhHhcCchhhCCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCC
Confidence 64344556678887764322222334678999999996556789999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCceEEEEecCHHHHHhhccEEEEEECCEEEEecCChhHHHH
Q 005532 576 IPSKEMLEEAISEYKGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYYLE 630 (692)
Q Consensus 576 ~~~~~~l~~~l~~~~~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~~~~~ 630 (692)
+.+++.|.++|.++++|||+||||++++..+||+|++|++|++..|.|+|++|.+
T Consensus 463 ~~~~~~l~~~L~~~~gtvi~vSHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 517 (638)
T PRK10636 463 LDMRQALTEALIDFEGALVVVSHDRHLLRSTTDDLYLVHDGKVEPFDGDLEDYQQ 517 (638)
T ss_pred HHHHHHHHHHHHHcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEcCCCHHHHHH
Confidence 9999999999999988999999999999999999999999999989999999965
No 3
>PRK11147 ABC transporter ATPase component; Reviewed
Probab=100.00 E-value=1.4e-91 Score=813.08 Aligned_cols=522 Identities=34% Similarity=0.574 Sum_probs=416.9
Q ss_pred CcEEEEeEEEEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCCceEEEEcccCccCCC
Q 005532 96 SGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSNMKIAFLSQEFEVSMS 175 (692)
Q Consensus 96 ~~l~i~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~~~i~~v~Q~~~~~~~ 175 (692)
++|+++|++++|+++++|+||||+|++|++++|||||||||||||++|+|+++|++|+|.+++ ...++|++|.+.....
T Consensus 2 ~~l~i~~ls~~~~~~~il~~is~~i~~Ge~v~LvG~NGsGKSTLLriiaG~~~p~~G~I~~~~-~~~~~~l~q~~~~~~~ 80 (635)
T PRK11147 2 SLISIHGAWLSFSDAPLLDNAELHIEDNERVCLVGRNGAGKSTLMKILNGEVLLDDGRIIYEQ-DLIVARLQQDPPRNVE 80 (635)
T ss_pred cEEEEeeEEEEeCCceeEeCcEEEECCCCEEEEECCCCCCHHHHHHHHcCCCCCCCeEEEeCC-CCEEEEeccCCCCCCC
Confidence 369999999999998999999999999999999999999999999999999999999999985 5578999998654445
Q ss_pred CCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHHhhhcCCCcccccc
Q 005532 176 RTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFTADDGDR 255 (692)
Q Consensus 176 ~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl~~~~~~~ 255 (692)
.++.+++...+.........+..+...+.. ....+ .+..+..+.......+.+....++.++++.+||. .++
T Consensus 81 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~----~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgl~---~~~ 152 (635)
T PRK11147 81 GTVYDFVAEGIEEQAEYLKRYHDISHLVET-DPSEK----NLNELAKLQEQLDHHNLWQLENRINEVLAQLGLD---PDA 152 (635)
T ss_pred CCHHHHHHHhhHHHHHHHHHHHHHHHHhcc-CchHH----HHHHHHHHHHHHHhcCcccHHHHHHHHHHhCCCC---CCC
Confidence 688887653332111111111111111100 00000 1111111111122344566778899999999995 278
Q ss_pred ccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHccCCCeEEEEecCHHHHHhhcCeEEEEecceEE
Q 005532 256 LVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGKQDVPMVIISHDRAFLDQLCTKIVETEMGVSR 335 (692)
Q Consensus 256 ~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~~~~tvI~vsHd~~~l~~~~d~i~~l~~G~~~ 335 (692)
++.+|||||||||+|||||+.+|+||||||||||||+.+++||.++|++.+.|||+||||++++..+||+|+++++|++.
T Consensus 153 ~~~~LSgGekqRv~LAraL~~~P~lLLLDEPt~~LD~~~~~~L~~~L~~~~~tvlivsHd~~~l~~~~d~i~~L~~G~i~ 232 (635)
T PRK11147 153 ALSSLSGGWLRKAALGRALVSNPDVLLLDEPTNHLDIETIEWLEGFLKTFQGSIIFISHDRSFIRNMATRIVDLDRGKLV 232 (635)
T ss_pred chhhcCHHHHHHHHHHHHHhcCCCEEEEcCCCCccCHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhcCeEEEEECCEEE
Confidence 99999999999999999999999999999999999999999999999988889999999999999999999999999998
Q ss_pred EeccChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchhhhHHHHHHHHHHHHhhhcccccccceeeecC
Q 005532 336 TYEGNYSQYVLEKAAWIESQYAAWEKQQREIEQTKDLINRLGAGANSGRASSAEKKLERLQEEEQIEKPFQRKQMKIRFP 415 (692)
Q Consensus 336 ~~~G~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~l~rl~~~~~~~~~~~~~~~~~~~~ 415 (692)
.|.|+|+.|+.++......+...+..+++.+++...++++ ...+...+...+.++++++.... ..++.......+.++
T Consensus 233 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~a~~~~~~~r~~~~~~~~~~~-~~~~~~~~~~~~~~~ 310 (635)
T PRK11147 233 SYPGNYDQYLLEKEEALRVEELQNAEFDRKLAQEEVWIRQ-GIKARRTRNEGRVRALKALRRER-SERREVMGTAKMQVE 310 (635)
T ss_pred EecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhhhhhhhHHHHHHHHHHhhhhh-ccccccCCceeEEeC
Confidence 8999999999988777666667777777888888888876 22111111133344444433111 111111223345566
Q ss_pred CCCCCCCceEEEEeEEEEcCCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccceeeeecc
Q 005532 416 ERGRSGRSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQ 495 (692)
Q Consensus 416 ~~~~~~~~~l~~~~l~~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~~~~~~~q 495 (692)
....+++.+|+++||++.|+++++|+++||+|.+|+++||+|||||||||||++|+|+++|++|+|.+ |.++.++|+.|
T Consensus 311 ~~~~~~~~~l~~~~l~~~~~~~~il~~vsl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~p~~G~i~~-~~~~~i~y~~q 389 (635)
T PRK11147 311 EASRSGKIVFEMENVNYQIDGKQLVKDFSAQVQRGDKIALIGPNGCGKTTLLKLMLGQLQADSGRIHC-GTKLEVAYFDQ 389 (635)
T ss_pred CCCCCCCceEEEeeeEEEECCeEEEcCcEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEE-CCCcEEEEEeC
Confidence 55556778999999999999889999999999999999999999999999999999999999999999 55677889988
Q ss_pred cchhhcCCCccHHHHHHHHhccc----cHHHHHHHHhhcCCCcccccccCCCCCHHHHHHHHHHHHhccCCcEEEEeCCC
Q 005532 496 NQAEALDLDKTVLETVAEAAEDW----RIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPT 571 (692)
Q Consensus 496 ~~~~~l~~~~tv~e~~~~~~~~~----~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~LAral~~~p~lLlLDEPT 571 (692)
.. ..+++..|+.+++....... ....+..+|+.|++..+..++++.+|||||||||+||++|+.+|+||||||||
T Consensus 390 ~~-~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LSgGekqRl~la~al~~~p~lLlLDEPt 468 (635)
T PRK11147 390 HR-AELDPEKTVMDNLAEGKQEVMVNGRPRHVLGYLQDFLFHPKRAMTPVKALSGGERNRLLLARLFLKPSNLLILDEPT 468 (635)
T ss_pred cc-cccCCCCCHHHHHHhhcccccccchHHHHHHHHHhcCCCHHHHhChhhhCCHHHHHHHHHHHHHhcCCCEEEEcCCC
Confidence 64 35677899999987643211 13457889999999756678999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHhcCceEEEEecCHHHHHhhccEEEEEE-CCEEEEecCChhHHHH
Q 005532 572 NHLDIPSKEMLEEAISEYKGTVITVSHDRYFVKQIVNRVVEVK-GSNLQDYAGDYNYYLE 630 (692)
Q Consensus 572 n~LD~~~~~~l~~~l~~~~~tviivSHd~~~l~~~~d~i~~l~-~g~l~~~~g~~~~~~~ 630 (692)
||||+.+++.|.++|+++++|||+||||++++..+||+|++|+ +|++..|.|+|++|.+
T Consensus 469 ~~LD~~~~~~l~~~l~~~~~tvi~vSHd~~~~~~~~d~i~~l~~~g~i~~~~g~y~~y~~ 528 (635)
T PRK11147 469 NDLDVETLELLEELLDSYQGTVLLVSHDRQFVDNTVTECWIFEGNGKIGRYVGGYHDARQ 528 (635)
T ss_pred CCCCHHHHHHHHHHHHhCCCeEEEEECCHHHHHHhcCEEEEEeCCCeEEEccCCHHHHHH
Confidence 9999999999999999998899999999999999999999998 8999999999999965
No 4
>PRK11819 putative ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=1.1e-88 Score=778.56 Aligned_cols=526 Identities=32% Similarity=0.520 Sum_probs=409.5
Q ss_pred CcEEEEeEEEEeC-CeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCCceEEEEcccCccCC
Q 005532 96 SGVKLENISKSYK-GVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSNMKIAFLSQEFEVSM 174 (692)
Q Consensus 96 ~~l~i~~ls~~y~-~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~~~i~~v~Q~~~~~~ 174 (692)
++|+++|++++|+ ++++|+|+||+|++|++++|+|||||||||||++|+|+++|++|+|.+++ ...||||+|++.+++
T Consensus 5 ~~l~i~~l~~~y~~~~~il~~vs~~i~~Ge~~~iiG~NGsGKSTLlk~i~G~~~p~~G~i~~~~-~~~i~~v~Q~~~~~~ 83 (556)
T PRK11819 5 YIYTMNRVSKVVPPKKQILKDISLSFFPGAKIGVLGLNGAGKSTLLRIMAGVDKEFEGEARPAP-GIKVGYLPQEPQLDP 83 (556)
T ss_pred EEEEEeeEEEEeCCCCeeeeCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEecC-CCEEEEEecCCCCCC
Confidence 4799999999998 78899999999999999999999999999999999999999999999874 457999999998878
Q ss_pred CCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHHhhhcCCCccccc
Q 005532 175 SRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFTADDGD 254 (692)
Q Consensus 175 ~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl~~~~~~ 254 (692)
..||.||+...+.........+........ ...+.+..+++.+..+.......+.|....++.++++.+|+. ..+
T Consensus 84 ~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~--~~~ 158 (556)
T PRK11819 84 EKTVRENVEEGVAEVKAALDRFNEIYAAYA---EPDADFDALAAEQGELQEIIDAADAWDLDSQLEIAMDALRCP--PWD 158 (556)
T ss_pred CCcHHHHHHHhhHHHHHHHHHHHHHHHHhc---cCchhhHHHHHHHHHHHHHHHhcCccchHHHHHHHHHhCCCC--ccc
Confidence 889999986432110000000000000000 000011122233333344445566677788899999999995 368
Q ss_pred cccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHccCCCeEEEEecCHHHHHhhcCeEEEEecceE
Q 005532 255 RLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGKQDVPMVIISHDRAFLDQLCTKIVETEMGVS 334 (692)
Q Consensus 255 ~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~~~~tvI~vsHd~~~l~~~~d~i~~l~~G~~ 334 (692)
+++.+|||||||||+|||||+.+|+||||||||||||+.++.++.++|++.+.|||+||||++++..+||+|++|++|++
T Consensus 159 ~~~~~LSgGqkqrv~la~al~~~p~vlLLDEPt~~LD~~~~~~l~~~L~~~~~tviiisHd~~~~~~~~d~i~~l~~g~i 238 (556)
T PRK11819 159 AKVTKLSGGERRRVALCRLLLEKPDMLLLDEPTNHLDAESVAWLEQFLHDYPGTVVAVTHDRYFLDNVAGWILELDRGRG 238 (556)
T ss_pred CchhhcCHHHHHHHHHHHHHhCCCCEEEEcCCCCcCChHHHHHHHHHHHhCCCeEEEEeCCHHHHHhhcCeEEEEeCCEE
Confidence 99999999999999999999999999999999999999999999999988778999999999999999999999999998
Q ss_pred EEeccChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchhhhHHHHHHHHHHHHhhhcccccccceeeec
Q 005532 335 RTYEGNYSQYVLEKAAWIESQYAAWEKQQREIEQTKDLINRLGAGANSGRASSAEKKLERLQEEEQIEKPFQRKQMKIRF 414 (692)
Q Consensus 335 ~~~~G~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~l~rl~~~~~~~~~~~~~~~~~~~ 414 (692)
..|.|+|+.|...+......+...+++.++.+++...++++.... .........+++++... ..++..++...+.+
T Consensus 239 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 314 (556)
T PRK11819 239 IPWEGNYSSWLEQKAKRLAQEEKQEAARQKALKRELEWVRQSPKA-RQAKSKARLARYEELLS---EEYQKRNETNEIFI 314 (556)
T ss_pred EEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh-hHHHHHHHHHHHHHhhc---ccccccCCCceeec
Confidence 779999999987766555555555666666665555555431110 00011111222222211 01111111122223
Q ss_pred CCCCCCCCceEEEEeEEEEcCCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccceeeeec
Q 005532 415 PERGRSGRSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFE 494 (692)
Q Consensus 415 ~~~~~~~~~~l~~~~l~~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~~~~~~~ 494 (692)
|+......++|+++||++.|+++.+|+++||+|++||++||+|+||||||||+++|+|+++|++|+|.++ ..+..+|++
T Consensus 315 ~~~~~~~~~~l~~~~l~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~p~~G~i~~~-~~~~i~~v~ 393 (556)
T PRK11819 315 PPGPRLGDKVIEAENLSKSFGDRLLIDDLSFSLPPGGIVGIIGPNGAGKSTLFKMITGQEQPDSGTIKIG-ETVKLAYVD 393 (556)
T ss_pred CCCCCCCCeEEEEEeEEEEECCeeeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEEC-CceEEEEEe
Confidence 3333335678999999999998899999999999999999999999999999999999999999999995 455678888
Q ss_pred ccchhhcCCCccHHHHHHHHhcc----ccHHHHHHHHhhcCCCcccccccCCCCCHHHHHHHHHHHHhccCCcEEEEeCC
Q 005532 495 QNQAEALDLDKTVLETVAEAAED----WRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEP 570 (692)
Q Consensus 495 q~~~~~l~~~~tv~e~~~~~~~~----~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~LAral~~~p~lLlLDEP 570 (692)
|+. ..+.+..|+.+++...... .....+..+++.+++.....++++.+|||||||||+|||+|+.+|+|||||||
T Consensus 394 q~~-~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LSgG~~qrv~la~al~~~p~lllLDEP 472 (556)
T PRK11819 394 QSR-DALDPNKTVWEEISGGLDIIKVGNREIPSRAYVGRFNFKGGDQQKKVGVLSGGERNRLHLAKTLKQGGNVLLLDEP 472 (556)
T ss_pred Cch-hhcCCCCCHHHHHHhhcccccccccHHHHHHHHHhCCCChhHhcCchhhCCHHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 863 2456778999998764221 11234567899999964457899999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHhcCceEEEEecCHHHHHhhccEEEEEEC-CEEEEecCChhHHHHHhH
Q 005532 571 TNHLDIPSKEMLEEAISEYKGTVITVSHDRYFVKQIVNRVVEVKG-SNLQDYAGDYNYYLEKNL 633 (692)
Q Consensus 571 Tn~LD~~~~~~l~~~l~~~~~tviivSHd~~~l~~~~d~i~~l~~-g~l~~~~g~~~~~~~~~~ 633 (692)
|+|||+.++++|.+.|.++.+|||+||||++++..+||+|++|++ |++..|.|+|++|.+.++
T Consensus 473 t~~LD~~~~~~l~~~l~~~~~tvi~vtHd~~~~~~~~d~i~~l~~~g~~~~~~g~~~~~~~~~~ 536 (556)
T PRK11819 473 TNDLDVETLRALEEALLEFPGCAVVISHDRWFLDRIATHILAFEGDSQVEWFEGNFQEYEEDKK 536 (556)
T ss_pred CCCCCHHHHHHHHHHHHhCCCeEEEEECCHHHHHHhCCEEEEEECCCeEEEecCCHHHHHHHHH
Confidence 999999999999999999988999999999999999999999985 889889999999977544
No 5
>KOG0927 consensus Predicted transporter (ABC superfamily) [General function prediction only]
Probab=100.00 E-value=8.5e-91 Score=741.91 Aligned_cols=532 Identities=40% Similarity=0.647 Sum_probs=468.7
Q ss_pred CCCCcEEEEeEEEEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCCceEEEEcccCcc
Q 005532 93 SISSGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSNMKIAFLSQEFEV 172 (692)
Q Consensus 93 ~~~~~l~i~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~~~i~~v~Q~~~~ 172 (692)
.....+.++|++++|.+..+++|+.|++.+|+.+||||+|||||||+|++|.|-..|..- +..+..++++...
T Consensus 71 ~~s~dvk~~sls~s~~g~~l~kd~~~El~~g~rygLiG~nG~Gkst~L~~i~~~e~P~p~-------~~d~y~ls~e~~p 143 (614)
T KOG0927|consen 71 PISRDVKIESLSLSFHGVELIKDVTLELNRGRRYGLIGPNGSGKSTFLRAIAGREVPIPE-------HIDFYLLSREIEP 143 (614)
T ss_pred cccccceeeeeeeccCCceeeeeeeEEecCCceEEEEcCCCCcHhHHHHHHhcCCCCCCc-------ccchhhhcccCCC
Confidence 445679999999999999999999999999999999999999999999999999988432 3345667777544
Q ss_pred CCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHHhhhcCCCccc
Q 005532 173 SMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFTADD 252 (692)
Q Consensus 173 ~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl~~~~ 252 (692)
....+|...++....+........+.+...++. ...+.++.++.+...++....+.++.++|..+|+..+.
T Consensus 144 s~~~av~~v~~~~~~e~~rle~~~E~l~~~~d~---------~~~~~l~~~~~r~~~~d~~~~~~k~~~il~glgf~~~m 214 (614)
T KOG0927|consen 144 SEKQAVQAVVMETDHERKRLEYLAEDLAQACDD---------KEKDELDELYERLDEMDNDTFEAKAAKILHGLGFLSEM 214 (614)
T ss_pred chHHHHHHHhhhhHHHHHHHHHHHHHHHhhccc---------hhhhHHHHHHHHHHhhCchhHHHHHHHHHHhcCCCHhH
Confidence 333345554545555555554445555444332 12344556667788899999999999999999999999
Q ss_pred cccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHccCCC-eEEEEecCHHHHHhhcCeEEEEec
Q 005532 253 GDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGKQDV-PMVIISHDRAFLDQLCTKIVETEM 331 (692)
Q Consensus 253 ~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~~~~-tvI~vsHd~~~l~~~~d~i~~l~~ 331 (692)
.++.+.+|||||++|++|||+|+.+|++|||||||||||.+++.||.++|.++.. ++|+++|+.+|++.+|++|+++.+
T Consensus 215 ~~k~~~~~SgGwrmR~aLAr~Lf~kP~LLLLDEPtnhLDleA~~wLee~L~k~d~~~lVi~sh~QDfln~vCT~Ii~l~~ 294 (614)
T KOG0927|consen 215 QDKKVKDLSGGWRMRAALARALFQKPDLLLLDEPTNHLDLEAIVWLEEYLAKYDRIILVIVSHSQDFLNGVCTNIIHLDN 294 (614)
T ss_pred HHHHhhccCchHHHHHHHHHHHhcCCCEEEecCCccCCCHHHHHHHHHHHHhccCceEEEEecchhhhhhHhhhhheecc
Confidence 9999999999999999999999999999999999999999999999999999888 899999999999999999999999
Q ss_pred ceEEEeccChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC--CcchhhhHHHHHHHHHHHHhhhcccccccc
Q 005532 332 GVSRTYEGNYSQYVLEKAAWIESQYAAWEKQQREIEQTKDLINRLGAG--ANSGRASSAEKKLERLQEEEQIEKPFQRKQ 409 (692)
Q Consensus 332 G~~~~~~G~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~--~~~~~~~~~~~~l~rl~~~~~~~~~~~~~~ 409 (692)
+++.+|.|||++|+..+.+....+...|+|+++.+...+.++.++..+ ..++++.+.++.+.++.+....+++...+.
T Consensus 295 kkl~~y~Gnydqy~~tr~E~~~~q~K~~~kqqk~i~~~K~~ia~~g~g~a~~~rka~s~~K~~~km~~~gL~ek~~~~k~ 374 (614)
T KOG0927|consen 295 KKLIYYEGNYDQYVKTRSELEENQMKAYEKQQKQIAHMKDLIARFGHGSAKLGRKAQSKEKTLDKMEADGLTEKVVGEKV 374 (614)
T ss_pred cceeeecCCHHHHhhHHHHHhHHHHHHHHHHHhHHHHhhHHHHhhcccchhhhHHHhhhhhhHHHHhhccccccccCCce
Confidence 999999999999999999999999999999999999999999998765 344677788888888888777778888888
Q ss_pred eeeecCCCCCCCCceEEEEeEEEEcCCe-ecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccc
Q 005532 410 MKIRFPERGRSGRSVVTIKNLEFGYEDR-LLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNV 488 (692)
Q Consensus 410 ~~~~~~~~~~~~~~~l~~~~l~~~y~~~-~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~ 488 (692)
..+.||..+..+.+++.+.||+|.|.+. .++++++|-|..++++++|||||+|||||||+++|.+.|..|.|....+.
T Consensus 375 l~~~f~~vg~~p~pvi~~~nv~F~y~~~~~iy~~l~fgid~~srvAlVGPNG~GKsTLlKl~~gdl~p~~G~vs~~~H~- 453 (614)
T KOG0927|consen 375 LSFRFPEVGKIPPPVIMVQNVSFGYSDNPMIYKKLNFGIDLDSRVALVGPNGAGKSTLLKLITGDLQPTIGMVSRHSHN- 453 (614)
T ss_pred EEEEcccccCCCCCeEEEeccccCCCCcchhhhhhhcccCcccceeEecCCCCchhhhHHHHhhccccccccccccccc-
Confidence 8999999988889999999999999866 68999999999999999999999999999999999999999999876544
Q ss_pred eeeeecccchhhcCCCccHHHHHHHHhcc-ccHHHHHHHHhhcCCCcccccccCCCCCHHHHHHHHHHHHhccCCcEEEE
Q 005532 489 LPNYFEQNQAEALDLDKTVLETVAEAAED-WRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVL 567 (692)
Q Consensus 489 ~~~~~~q~~~~~l~~~~tv~e~~~~~~~~-~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~LAral~~~p~lLlL 567 (692)
...++.|+..+.++.+.++.++++..... +..+.++.+|++|||.++..+.++++||+|||.||++|++++.+|.||||
T Consensus 454 ~~~~y~Qh~~e~ldl~~s~le~~~~~~~~~~~~e~~r~ilgrfgLtgd~q~~p~~~LS~Gqr~rVlFa~l~~kqP~lLlL 533 (614)
T KOG0927|consen 454 KLPRYNQHLAEQLDLDKSSLEFMMPKFPDEKELEEMRSILGRFGLTGDAQVVPMSQLSDGQRRRVLFARLAVKQPHLLLL 533 (614)
T ss_pred cchhhhhhhHhhcCcchhHHHHHHHhccccchHHHHHHHHHHhCCCccccccchhhcccccchhHHHHHHHhcCCcEEEe
Confidence 34578899888999999999999987764 77888999999999998889999999999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHhcCceEEEEecCHHHHHhhccEEEEEECCEEEEecCChhHHHHHhHHHHHHHHH
Q 005532 568 DEPTNHLDIPSKEMLEEAISEYKGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYYLEKNLDAREKELE 641 (692)
Q Consensus 568 DEPTn~LD~~~~~~l~~~l~~~~~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~~~~~~~~~~~~~~~~ 641 (692)
||||||||+++...+.++|.+|.|+||+||||..+|.+++++||+..++.+..|.|.|.+|.+....+...+.+
T Consensus 534 DEPtnhLDi~tid~laeaiNe~~Ggvv~vSHDfrlI~qVaeEi~~c~~~~~~~~~G~i~~yk~~l~~~~~~e~~ 607 (614)
T KOG0927|consen 534 DEPTNHLDIETIDALAEAINEFPGGVVLVSHDFRLISQVAEEIWVCENGTVTKWDGDIEIYKEHLKKKRAKEDE 607 (614)
T ss_pred cCCCcCCCchhHHHHHHHHhccCCceeeeechhhHHHHHHHHhHhhccCceeecCccHHHHHHHHHHHHhhhhH
Confidence 99999999999999999999999999999999999999999999999999999999999998866655444433
No 6
>TIGR03719 ABC_ABC_ChvD ATP-binding cassette protein, ChvD family. Members of this protein family have two copies of the ABC transporter ATP-binding cassette, but are found outside the common ABC transporter operon structure that features integral membrane permease proteins and substrate-binding proteins encoded next to the ATP-binding cassette (ABC domain) protein. The member protein ChvD from Agrobacterium tumefaciens was identified as both a candidate to interact with VirB8, based on yeast two-hybrid analysis, and as an apparent regulator of VirG. The general function of this protein family is unknown.
Probab=100.00 E-value=2.7e-87 Score=766.79 Aligned_cols=525 Identities=33% Similarity=0.536 Sum_probs=403.7
Q ss_pred cEEEEeEEEEeC-CeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCCceEEEEcccCccCCC
Q 005532 97 GVKLENISKSYK-GVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSNMKIAFLSQEFEVSMS 175 (692)
Q Consensus 97 ~l~i~~ls~~y~-~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~~~i~~v~Q~~~~~~~ 175 (692)
+|+++|++++|+ ++++|+|+||+|++|++++|+|||||||||||++|+|+++|++|+|.+++ ...|||++|++.++++
T Consensus 4 ~i~~~nls~~~~~~~~il~~is~~i~~Ge~~~liG~NGsGKSTLl~~i~G~~~p~~G~i~~~~-~~~i~~v~Q~~~~~~~ 82 (552)
T TIGR03719 4 IYTMNRVSKVVPPKKEILKDISLSFFPGAKIGVLGLNGAGKSTLLRIMAGVDKEFNGEARPAP-GIKVGYLPQEPQLDPT 82 (552)
T ss_pred EEEEeeEEEecCCCCeeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEecC-CCEEEEEeccCCCCCC
Confidence 599999999998 67899999999999999999999999999999999999999999999874 4689999999988888
Q ss_pred CCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHHhhhcCCCcccccc
Q 005532 176 RTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFTADDGDR 255 (692)
Q Consensus 176 ~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl~~~~~~~ 255 (692)
.||.||+...+.........+......+... ..+ ...++.....+....+.++.+.+..++.++++.+|+. ..++
T Consensus 83 ~tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~--~~~~ 157 (552)
T TIGR03719 83 KTVRENVEEGVAEIKDALDRFNEISAKFAEP--DAD-MDALLAEQAELQEIIDAADAWDLDRKLEIAMDALRCP--PWDA 157 (552)
T ss_pred CcHHHHHHHhhHHHHHHHHHHHHHHHHhccC--chh-hHHHHHHHHHHHHHHHhcCcchhHHHHHHHHhhCCCC--cccC
Confidence 9999998643211000000000000000000 000 0011111222333344556667778889999999995 3588
Q ss_pred ccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHccCCCeEEEEecCHHHHHhhcCeEEEEecceEE
Q 005532 256 LVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGKQDVPMVIISHDRAFLDQLCTKIVETEMGVSR 335 (692)
Q Consensus 256 ~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~~~~tvI~vsHd~~~l~~~~d~i~~l~~G~~~ 335 (692)
++.+|||||||||+|||||+.+|+||||||||+|||+.++++|.++|++.+.|||+||||++++..+||+|+++++|++.
T Consensus 158 ~~~~LSgGqkqrv~la~al~~~p~lLLLDEPt~~LD~~~~~~l~~~L~~~~~tvIiisHd~~~~~~~~d~v~~l~~g~i~ 237 (552)
T TIGR03719 158 DVTKLSGGERRRVALCRLLLSKPDMLLLDEPTNHLDAESVAWLEQHLQEYPGTVVAVTHDRYFLDNVAGWILELDRGRGI 237 (552)
T ss_pred chhhcCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCChHHHHHHHHHHHhCCCeEEEEeCCHHHHHhhcCeEEEEECCEEE
Confidence 89999999999999999999999999999999999999999999999887789999999999999999999999999987
Q ss_pred EeccChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchhhhHHHHHHHHHHHHhhhcccccccceeeecC
Q 005532 336 TYEGNYSQYVLEKAAWIESQYAAWEKQQREIEQTKDLINRLGAGANSGRASSAEKKLERLQEEEQIEKPFQRKQMKIRFP 415 (692)
Q Consensus 336 ~~~G~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~l~rl~~~~~~~~~~~~~~~~~~~~ 415 (692)
.|.|+|++|..........+...+.+.++.+.+...++.+.... .........+.++++.+. ..+...+...+.++
T Consensus 238 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 313 (552)
T TIGR03719 238 PWEGNYSSWLEQKEKRLEQEEKEESARQKALKRELEWVRSSPKA-RQAKSKARLARYEELLSQ---EFQKRNETAEIYIP 313 (552)
T ss_pred EecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhh-HHHHHHHHHHHHHhhhhh---cccccCCCceeecC
Confidence 79999999987765555544455555555555555554431110 000111111222222211 01111111122233
Q ss_pred CCCCCCCceEEEEeEEEEcCCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccceeeeecc
Q 005532 416 ERGRSGRSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQ 495 (692)
Q Consensus 416 ~~~~~~~~~l~~~~l~~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~~~~~~~q 495 (692)
.....++++|+++|+++.|+++.+|+++||+|++|+++||+||||||||||+++|+|+++|++|+|.++ .++..+|++|
T Consensus 314 ~~~~~~~~~l~~~~l~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~~G~i~~~-~~~~i~~v~q 392 (552)
T TIGR03719 314 PGPRLGDKVIEAENLSKGFGDKLLIDDLSFKLPPGGIVGVIGPNGAGKSTLFRMITGQEQPDSGTIKIG-ETVKLAYVDQ 392 (552)
T ss_pred CCCCCCCeEEEEeeEEEEECCeeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCeEEEEC-CceEEEEEeC
Confidence 322335678999999999998899999999999999999999999999999999999999999999995 3556788888
Q ss_pred cchhhcCCCccHHHHHHHHhcc---c-cHHHHHHHHhhcCCCcccccccCCCCCHHHHHHHHHHHHhccCCcEEEEeCCC
Q 005532 496 NQAEALDLDKTVLETVAEAAED---W-RIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPT 571 (692)
Q Consensus 496 ~~~~~l~~~~tv~e~~~~~~~~---~-~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~LAral~~~p~lLlLDEPT 571 (692)
+. ..+.+..|+.+++...... . ....+..+++.+++.....++++.+|||||||||+|||+|+.+|+||||||||
T Consensus 393 ~~-~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LSgGe~qrv~la~al~~~p~lllLDEPt 471 (552)
T TIGR03719 393 SR-DALDPNKTVWEEISGGLDIIQLGKREVPSRAYVGRFNFKGSDQQKKVGQLSGGERNRVHLAKTLKSGGNVLLLDEPT 471 (552)
T ss_pred Cc-cccCCCCcHHHHHHhhccccccCcchHHHHHHHHhCCCChhHhcCchhhCCHHHHHHHHHHHHHhhCCCEEEEeCCC
Confidence 63 2356778999998764321 1 12345678999999644578999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHhcCceEEEEecCHHHHHhhccEEEEEEC-CEEEEecCChhHHHHHhH
Q 005532 572 NHLDIPSKEMLEEAISEYKGTVITVSHDRYFVKQIVNRVVEVKG-SNLQDYAGDYNYYLEKNL 633 (692)
Q Consensus 572 n~LD~~~~~~l~~~l~~~~~tviivSHd~~~l~~~~d~i~~l~~-g~l~~~~g~~~~~~~~~~ 633 (692)
||||+.++++|.+.|.++.+|||+||||++++..+||+|++|++ |++..|.|+|++|.+.+.
T Consensus 472 ~~LD~~~~~~l~~~l~~~~~~viivsHd~~~~~~~~d~i~~l~~~~~~~~~~g~~~~~~~~~~ 534 (552)
T TIGR03719 472 NDLDVETLRALEEALLEFAGCAVVISHDRWFLDRIATHILAFEGDSHVEWFEGNYSEYEEDKK 534 (552)
T ss_pred CCCCHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHhCCEEEEEECCCeEEEeCCCHHHHHHHHH
Confidence 99999999999999999988999999999999999999999996 688889999999976544
No 7
>PRK15064 ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.1e-87 Score=762.57 Aligned_cols=523 Identities=33% Similarity=0.586 Sum_probs=398.6
Q ss_pred cEEEEeEEEEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCCceEEEEcccCccCCCC
Q 005532 97 GVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSNMKIAFLSQEFEVSMSR 176 (692)
Q Consensus 97 ~l~i~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~~~i~~v~Q~~~~~~~~ 176 (692)
+|+++|++++|+++++|+|+||+|++|++++|+|||||||||||++|+|+++|++|+|.+++ ...|+|++|++.++...
T Consensus 1 ml~i~~ls~~~~~~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~p~~G~i~~~~-~~~i~~~~q~~~~~~~~ 79 (530)
T PRK15064 1 MLSTANITMQFGAKPLFENISVKFGGGNRYGLIGANGCGKSTFMKILGGDLEPSAGNVSLDP-NERLGKLRQDQFAFEEF 79 (530)
T ss_pred CEEEEEEEEEeCCcEeEeCCEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEecC-CCEEEEEeccCCcCCCC
Confidence 38899999999988999999999999999999999999999999999999999999999985 35799999998887888
Q ss_pred CHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHHhhhcCCCccccccc
Q 005532 177 TVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFTADDGDRL 256 (692)
Q Consensus 177 Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl~~~~~~~~ 256 (692)
||.+|+..............+.+.. ....... + ................+..+.++.++|+.+|+.....+++
T Consensus 80 tv~e~l~~~~~~~~~~~~~~~~~~~-~~~~~~~-~-----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~ 152 (530)
T PRK15064 80 TVLDTVIMGHTELWEVKQERDRIYA-LPEMSEE-D-----GMKVADLEVKFAEMDGYTAEARAGELLLGVGIPEEQHYGL 152 (530)
T ss_pred cHHHHHHHhhHHHHHHHHHHHHHhc-ccccccc-h-----HHHHHHHHHHHHhcCchhHHHHHHHHHHhCCCChhHhcCc
Confidence 9999986432110000000000000 0000000 0 0001111111222344555678889999999964344678
Q ss_pred cccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHccCCCeEEEEecCHHHHHhhcCeEEEEecceEEE
Q 005532 257 VASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGKQDVPMVIISHDRAFLDQLCTKIVETEMGVSRT 336 (692)
Q Consensus 257 ~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~~~~tvI~vsHd~~~l~~~~d~i~~l~~G~~~~ 336 (692)
+.+|||||||||+|||||+.+|+||||||||+|||+.++.+|.++|++.+.|||+||||++++..+||+|+++++|++..
T Consensus 153 ~~~LSgGq~qrv~lA~aL~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~tiiivsHd~~~~~~~~d~i~~l~~g~i~~ 232 (530)
T PRK15064 153 MSEVAPGWKLRVLLAQALFSNPDILLLDEPTNNLDINTIRWLEDVLNERNSTMIIISHDRHFLNSVCTHMADLDYGELRV 232 (530)
T ss_pred hhhcCHHHHHHHHHHHHHhcCCCEEEEcCCCcccCHHHHHHHHHHHHhCCCeEEEEeCCHHHHHhhcceEEEEeCCEEEE
Confidence 99999999999999999999999999999999999999999999998889999999999999999999999999999877
Q ss_pred eccChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCc-chhhhHHHHHHHHHHHHhhhcccccccceeeecC
Q 005532 337 YEGNYSQYVLEKAAWIESQYAAWEKQQREIEQTKDLINRLGAGAN-SGRASSAEKKLERLQEEEQIEKPFQRKQMKIRFP 415 (692)
Q Consensus 337 ~~G~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~-~~~~~~~~~~l~rl~~~~~~~~~~~~~~~~~~~~ 415 (692)
|.|+|++|..++..........+..++++++++..++.+....+. ...+....++++++.... . .+.........++
T Consensus 233 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~ 310 (530)
T PRK15064 233 YPGNYDEYMTAATQARERLLADNAKKKAQIAELQSFVSRFSANASKAKQATSRAKQIDKIKLEE-V-KPSSRQNPFIRFE 310 (530)
T ss_pred ecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhHHHHHHHHHHhhccccc-c-CCccccCceeeCC
Confidence 899999988765544444444455555555555555444221110 001111112222211000 0 0000000111223
Q ss_pred CCCCCCCceEEEEeEEEEcCCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccceeeeecc
Q 005532 416 ERGRSGRSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQ 495 (692)
Q Consensus 416 ~~~~~~~~~l~~~~l~~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~~~~~~~q 495 (692)
.....++++|+++|+++.|+++.+|+++||+|++|++++|+||||||||||+++|+|+++|++|+|.+++. ...+|++|
T Consensus 311 ~~~~~~~~~l~~~~l~~~~~~~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~p~~G~i~~~~~-~~i~~~~q 389 (530)
T PRK15064 311 QDKKLHRNALEVENLTKGFDNGPLFKNLNLLLEAGERLAIIGENGVGKTTLLRTLVGELEPDSGTVKWSEN-ANIGYYAQ 389 (530)
T ss_pred CCCCCCCceEEEEeeEEeeCCceeecCcEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCc-eEEEEEcc
Confidence 22233456899999999999888999999999999999999999999999999999999999999999874 35688888
Q ss_pred cchhhcCCCccHHHHHHHHhc-cccHHHHHHHHhhcCCCcccccccCCCCCHHHHHHHHHHHHhccCCcEEEEeCCCCCC
Q 005532 496 NQAEALDLDKTVLETVAEAAE-DWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHL 574 (692)
Q Consensus 496 ~~~~~l~~~~tv~e~~~~~~~-~~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~LAral~~~p~lLlLDEPTn~L 574 (692)
+....+....|+.+++..... ......+..+|+.+++.....++++.+|||||||||+|||+|+.+|+|||||||||||
T Consensus 390 ~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LSgGq~qrv~la~al~~~p~lllLDEPt~~L 469 (530)
T PRK15064 390 DHAYDFENDLTLFDWMSQWRQEGDDEQAVRGTLGRLLFSQDDIKKSVKVLSGGEKGRMLFGKLMMQKPNVLVMDEPTNHM 469 (530)
T ss_pred cccccCCCCCcHHHHHHHhccCCccHHHHHHHHHHcCCChhHhcCcccccCHHHHHHHHHHHHHhcCCCEEEEcCCCCCC
Confidence 643335556899998864321 1224467889999999545679999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHhcCceEEEEecCHHHHHhhccEEEEEECCEEEEecCChhHHHH
Q 005532 575 DIPSKEMLEEAISEYKGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYYLE 630 (692)
Q Consensus 575 D~~~~~~l~~~l~~~~~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~~~~~ 630 (692)
|+.+++.|.+.|+++++|||+||||++++..+||+|++|++|+++.+.|++++|.+
T Consensus 470 D~~~~~~l~~~l~~~~~tvi~vsHd~~~~~~~~d~i~~l~~g~i~~~~g~~~~~~~ 525 (530)
T PRK15064 470 DMESIESLNMALEKYEGTLIFVSHDREFVSSLATRIIEITPDGVVDFSGTYEEYLR 525 (530)
T ss_pred CHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEcCCCHHHHHH
Confidence 99999999999999988999999999999999999999999999888899988865
No 8
>PLN03073 ABC transporter F family; Provisional
Probab=100.00 E-value=8.6e-85 Score=757.45 Aligned_cols=519 Identities=29% Similarity=0.491 Sum_probs=400.7
Q ss_pred CCCcEEEEeEEEEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCCceEEEEcccCccC
Q 005532 94 ISSGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSNMKIAFLSQEFEVS 173 (692)
Q Consensus 94 ~~~~l~i~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~~~i~~v~Q~~~~~ 173 (692)
....|+++|++|+|+++++|+|+||+|++|+++||||+|||||||||++|+|... .| + ....+|+|++|++. .
T Consensus 174 ~~~~I~i~nls~~y~~~~ll~~isl~i~~Ge~~gLvG~NGsGKSTLLr~l~g~~~--~g---~-p~~g~I~~~~Q~~~-g 246 (718)
T PLN03073 174 AIKDIHMENFSISVGGRDLIVDASVTLAFGRHYGLVGRNGTGKTTFLRYMAMHAI--DG---I-PKNCQILHVEQEVV-G 246 (718)
T ss_pred CceeEEEceEEEEeCCCEEEECCEEEECCCCEEEEECCCCCCHHHHHHHHcCCCC--CC---C-CCCCEEEEEeccCC-C
Confidence 3557999999999998889999999999999999999999999999999999741 13 1 13456889999853 2
Q ss_pred CCCCHHHHHHhhhHHHHHHHHH-HHHHHHH--Hh------------hccchhHHHHHHHHHHHHHHHHHhhcCcccHHHH
Q 005532 174 MSRTVREEFMSAFKEEMEIAGK-LERVQKA--LE------------SAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAK 238 (692)
Q Consensus 174 ~~~Tv~e~i~~~~~~~~~~~~~-~~~~~~~--l~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (692)
.+.|+.+.+............. ...+.+. +. ....+ ...+......+...+...+.|..+.+
T Consensus 247 ~~~t~~~~v~~~~~~~~~~~~~~~~~~~q~~~l~~~~~~~~~~~~~~~~~~---~~~~~~r~~~~~~~~~~~~~~~~~~r 323 (718)
T PLN03073 247 DDTTALQCVLNTDIERTQLLEEEAQLVAQQRELEFETETGKGKGANKDGVD---KDAVSQRLEEIYKRLELIDAYTAEAR 323 (718)
T ss_pred CCCCHHHHHHHhhHHHHHHHHHHHHHHHHHHHhhhcccccccccccccccc---hHHHHHHHHHHHHHHHhcCcchHHHH
Confidence 4567777654322111111000 0000000 00 00000 01123344445556677889999999
Q ss_pred HHHHhhhcCCCccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHccCCCeEEEEecCHHH
Q 005532 239 VSKLMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGKQDVPMVIISHDRAF 318 (692)
Q Consensus 239 i~~ll~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~~~~tvI~vsHd~~~ 318 (692)
+.++|..+||.....++++.+|||||||||+||+||+.+|+||||||||+|||+.++.||.++|++.+.|||+||||+++
T Consensus 324 ~~~~L~~lgl~~~~~~~~~~~LSgG~k~rv~LA~aL~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~~~tviivsHd~~~ 403 (718)
T PLN03073 324 AASILAGLSFTPEMQVKATKTFSGGWRMRIALARALFIEPDLLLLDEPTNHLDLHAVLWLETYLLKWPKTFIVVSHAREF 403 (718)
T ss_pred HHHHHHHCCCChHHHhCchhhCCHHHHHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHcCCEEEEEECCHHH
Confidence 99999999997566789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcCeEEEEecceEEEeccChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCc-chhhhHHHHHHHHHHH
Q 005532 319 LDQLCTKIVETEMGVSRTYEGNYSQYVLEKAAWIESQYAAWEKQQREIEQTKDLINRLGAGAN-SGRASSAEKKLERLQE 397 (692)
Q Consensus 319 l~~~~d~i~~l~~G~~~~~~G~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~-~~~~~~~~~~l~rl~~ 397 (692)
+..+||+|+++++|++..|.|+|+.|...+......+...++.+++..+++++++.++...+. +..+....+.++++..
T Consensus 404 l~~~~d~i~~l~~g~i~~~~g~~~~~~~~~~~~~~~~~~~~e~~~k~~~~l~~~i~~~~~~a~~~~~~~s~~k~l~~~~~ 483 (718)
T PLN03073 404 LNTVVTDILHLHGQKLVTYKGDYDTFERTREEQLKNQQKAFESNERSRSHMQAFIDKFRYNAKRASLVQSRIKALDRLGH 483 (718)
T ss_pred HHHhCCEEEEEECCEEEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHHHhhcchHHHHHhh
Confidence 999999999999999988999999998877777777777888888888877777776543211 1122222333444322
Q ss_pred HhhhcccccccceeeecCCC-CCCCCceEEEEeEEEEcCC-eecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCC
Q 005532 398 EEQIEKPFQRKQMKIRFPER-GRSGRSVVTIKNLEFGYED-RLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEK 475 (692)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~l~~~y~~-~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~ 475 (692)
.. ++.......+.+|.. ..++.++|+++||++.|++ +.+|+++||+|++|+++||+|||||||||||++|+|+++
T Consensus 484 ~~---~~~~~~~~~~~~~~~~~~~~~~~L~~~~ls~~y~~~~~il~~vsl~i~~Ge~i~LvG~NGsGKSTLLk~L~Gll~ 560 (718)
T PLN03073 484 VD---AVVNDPDYKFEFPTPDDRPGPPIISFSDASFGYPGGPLLFKNLNFGIDLDSRIAMVGPNGIGKSTILKLISGELQ 560 (718)
T ss_pred hh---ccccCCCceeecCCCccCCCCceEEEEeeEEEeCCCCeeEeccEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCC
Confidence 11 111111222334432 1344578999999999964 569999999999999999999999999999999999999
Q ss_pred CCeeEEEECCccceeeeecccchhhcCCCccHHHHHHH----HhccccHHHHHHHHhhcCCCcccccccCCCCCHHHHHH
Q 005532 476 PRGGEVLLGEHNVLPNYFEQNQAEALDLDKTVLETVAE----AAEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKAR 551 (692)
Q Consensus 476 p~~G~i~~~~~~~~~~~~~q~~~~~l~~~~tv~e~~~~----~~~~~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqr 551 (692)
|++|+|.+++ ....+|++|+... ..++.++... .........+..+|+.+++.....++++.+||||||||
T Consensus 561 p~~G~I~~~~-~~~igyv~Q~~~~----~l~~~~~~~~~~~~~~~~~~~~~i~~~L~~~gl~~~~~~~~~~~LSgGqkqR 635 (718)
T PLN03073 561 PSSGTVFRSA-KVRMAVFSQHHVD----GLDLSSNPLLYMMRCFPGVPEQKLRAHLGSFGVTGNLALQPMYTLSGGQKSR 635 (718)
T ss_pred CCCceEEECC-ceeEEEEeccccc----cCCcchhHHHHHHHhcCCCCHHHHHHHHHHCCCChHHhcCCccccCHHHHHH
Confidence 9999999875 3457888876422 2223333211 11122345688899999996556788999999999999
Q ss_pred HHHHHHhccCCcEEEEeCCCCCCCHHHHHHHHHHHHhcCceEEEEecCHHHHHhhccEEEEEECCEEEEecCChhHHHH
Q 005532 552 LAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEYKGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYYLE 630 (692)
Q Consensus 552 v~LAral~~~p~lLlLDEPTn~LD~~~~~~l~~~l~~~~~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~~~~~ 630 (692)
|+|||+|+.+|+||||||||||||+.+++.+.+.|.++++|||+||||++++..+||++++|++|++..+.|+|++|.+
T Consensus 636 vaLAraL~~~p~lLLLDEPT~~LD~~s~~~l~~~L~~~~gtvIivSHd~~~i~~~~drv~~l~~G~i~~~~g~~~~~~~ 714 (718)
T PLN03073 636 VAFAKITFKKPHILLLDEPSNHLDLDAVEALIQGLVLFQGGVLMVSHDEHLISGSVDELWVVSEGKVTPFHGTFHDYKK 714 (718)
T ss_pred HHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCCHHHHHH
Confidence 9999999999999999999999999999999999998888999999999999999999999999999989999999854
No 9
>PRK09700 D-allose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.1e-80 Score=704.49 Aligned_cols=442 Identities=21% Similarity=0.351 Sum_probs=351.4
Q ss_pred CcEEEEeEEEEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC-----------ceEE
Q 005532 96 SGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN-----------MKIA 164 (692)
Q Consensus 96 ~~l~i~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~-----------~~i~ 164 (692)
++|+++|++++|+++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.. ..|+
T Consensus 4 ~~l~~~~l~~~~~~~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~i~ 83 (510)
T PRK09700 4 PYISMAGIGKSFGPVHALKSVNLTVYPGEIHALLGENGAGKSTLMKVLSGIHEPTKGTITINNINYNKLDHKLAAQLGIG 83 (510)
T ss_pred ceEEEeeeEEEcCCeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCcCCCccEEEECCEECCCCCHHHHHHCCeE
Confidence 46999999999998889999999999999999999999999999999999999999999998732 2599
Q ss_pred EEcccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHHhh
Q 005532 165 FLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMP 244 (692)
Q Consensus 165 ~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~ 244 (692)
|++|++.+++..||.+|+........ .... ....+......++.++++
T Consensus 84 ~v~q~~~~~~~~tv~e~l~~~~~~~~-----------~~~~---------------------~~~~~~~~~~~~~~~~l~ 131 (510)
T PRK09700 84 IIYQELSVIDELTVLENLYIGRHLTK-----------KVCG---------------------VNIIDWREMRVRAAMMLL 131 (510)
T ss_pred EEeecccccCCCcHHHHhhhcccccc-----------cccc---------------------ccccCHHHHHHHHHHHHH
Confidence 99999988788899999853210000 0000 000001123356778899
Q ss_pred hcCCCccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHc---cCCCeEEEEecCHHHHHh
Q 005532 245 ELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG---KQDVPMVIISHDRAFLDQ 321 (692)
Q Consensus 245 ~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~---~~~~tvI~vsHd~~~l~~ 321 (692)
.+|+. ...++++.+|||||||||+|||||+.+|+||||||||+|||+.++.++.++|+ +.|+|||+||||++++..
T Consensus 132 ~~gl~-~~~~~~~~~LSgG~~qrv~ia~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsHd~~~~~~ 210 (510)
T PRK09700 132 RVGLK-VDLDEKVANLSISHKQMLEIAKTLMLDAKVIIMDEPTSSLTNKEVDYLFLIMNQLRKEGTAIVYISHKLAEIRR 210 (510)
T ss_pred HcCCC-CCcccchhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHH
Confidence 99996 56789999999999999999999999999999999999999999999988764 358999999999999999
Q ss_pred hcCeEEEEecceEEEeccChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchhhhHHHHHHHHHHHHhhh
Q 005532 322 LCTKIVETEMGVSRTYEGNYSQYVLEKAAWIESQYAAWEKQQREIEQTKDLINRLGAGANSGRASSAEKKLERLQEEEQI 401 (692)
Q Consensus 322 ~~d~i~~l~~G~~~~~~G~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~l~rl~~~~~~ 401 (692)
+||+|+++++|++ .+.|.++++... +.++.+.+. . .. .+ .
T Consensus 211 ~~d~v~~l~~G~i-~~~g~~~~~~~~-----------------------~~~~~~~~~-~---~~------~~------~ 250 (510)
T PRK09700 211 ICDRYTVMKDGSS-VCSGMVSDVSND-----------------------DIVRLMVGR-E---LQ------NR------F 250 (510)
T ss_pred hCCEEEEEECCEE-eeecchhhCCHH-----------------------HHHHHhcCC-C---cc------cc------c
Confidence 9999999999998 567776554211 001111100 0 00 00 0
Q ss_pred cccccccceeeecCC-CCCCCCceEEEEeEEEEcCCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeE
Q 005532 402 EKPFQRKQMKIRFPE-RGRSGRSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGE 480 (692)
Q Consensus 402 ~~~~~~~~~~~~~~~-~~~~~~~~l~~~~l~~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~ 480 (692)
... .+. ....+.++|+++|+++.|+ .+|+++||+|++|+++||+||||||||||+++|+|+++|++|+
T Consensus 251 ~~~---------~~~~~~~~~~~~l~~~~l~~~~~--~~l~~isl~i~~Ge~~~l~G~NGsGKSTLlk~i~Gl~~p~~G~ 319 (510)
T PRK09700 251 NAM---------KENVSNLAHETVFEVRNVTSRDR--KKVRDISFSVCRGEILGFAGLVGSGRTELMNCLFGVDKRAGGE 319 (510)
T ss_pred ccc---------ccccccCCCCcEEEEeCccccCC--CcccceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcCCCCe
Confidence 000 000 0112345899999999874 4899999999999999999999999999999999999999999
Q ss_pred EEECCccce-----------eeeecccch-hhcCCCccHHHHHHHHhc-----------ccc----HHHHHHHHhhcCCC
Q 005532 481 VLLGEHNVL-----------PNYFEQNQA-EALDLDKTVLETVAEAAE-----------DWR----IDDIKGLLGRCNFK 533 (692)
Q Consensus 481 i~~~~~~~~-----------~~~~~q~~~-~~l~~~~tv~e~~~~~~~-----------~~~----~~~~~~~L~~~~l~ 533 (692)
|.++|.++. .+|++|... ..+.+..|+.+|+..... .+. ...+.++|+.+++.
T Consensus 320 I~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~ 399 (510)
T PRK09700 320 IRLNGKDISPRSPLDAVKKGMAYITESRRDNGFFPNFSIAQNMAISRSLKDGGYKGAMGLFHEVDEQRTAENQRELLALK 399 (510)
T ss_pred EEECCEECCCCCHHHHHHCCcEEccCccccCCCcCCCcHHHHhccccccccccccccccccChHHHHHHHHHHHHhcCCC
Confidence 999886431 356776531 346678899999865311 001 12467899999995
Q ss_pred cccccccCCCCCHHHHHHHHHHHHhccCCcEEEEeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhccEE
Q 005532 534 ADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRV 610 (692)
Q Consensus 534 ~~~~~~~~~~LSgGqkqrv~LAral~~~p~lLlLDEPTn~LD~~~~~~l~~~l~~~---~~tviivSHd~~~l~~~~d~i 610 (692)
.+..++++.+|||||||||+|||||+.+|+||||||||++||+.+++.+.+.|+++ +.|||+||||++++..+||++
T Consensus 400 ~~~~~~~~~~LSgGq~qrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvi~vsHd~~~~~~~~d~i 479 (510)
T PRK09700 400 CHSVNQNITELSGGNQQKVLISKWLCCCPEVIIFDEPTRGIDVGAKAEIYKVMRQLADDGKVILMVSSELPEIITVCDRI 479 (510)
T ss_pred CCCccCccccCChHHHHHHHHHHHHhcCCCEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHhhCCEE
Confidence 35679999999999999999999999999999999999999999999999999765 569999999999999999999
Q ss_pred EEEECCEEEEe
Q 005532 611 VEVKGSNLQDY 621 (692)
Q Consensus 611 ~~l~~g~l~~~ 621 (692)
++|++|++...
T Consensus 480 ~~l~~G~i~~~ 490 (510)
T PRK09700 480 AVFCEGRLTQI 490 (510)
T ss_pred EEEECCEEEEE
Confidence 99999999754
No 10
>PRK10261 glutathione transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.2e-80 Score=715.15 Aligned_cols=472 Identities=18% Similarity=0.302 Sum_probs=358.4
Q ss_pred CCCcEEEEeEEEEeCC----eeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCC----------
Q 005532 94 ISSGVKLENISKSYKG----VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKS---------- 159 (692)
Q Consensus 94 ~~~~l~i~~ls~~y~~----~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~---------- 159 (692)
.+++|+++|++++|+. .++|+||||+|++|+++||||+||||||||+++|+|+++|++|+|.++|.
T Consensus 9 ~~~~l~v~~l~~~y~~~~~~~~~l~~is~~v~~Ge~~~lvG~nGsGKSTLl~~l~Gll~p~~G~i~~~g~~~~~~~~~~~ 88 (623)
T PRK10261 9 ARDVLAVENLNIAFMQEQQKIAAVRNLSFSLQRGETLAIVGESGSGKSVTALALMRLLEQAGGLVQCDKMLLRRRSRQVI 88 (623)
T ss_pred CCceEEEeceEEEecCCCCceeEEEeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCeEEEECCEEecccccccc
Confidence 3457999999999963 46999999999999999999999999999999999999999999987652
Q ss_pred --------------CceEEEEcccC--ccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHH
Q 005532 160 --------------NMKIAFLSQEF--EVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLL 223 (692)
Q Consensus 160 --------------~~~i~~v~Q~~--~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 223 (692)
...|||++|+| .+++..||.+|+...... .
T Consensus 89 ~~~~~~~~~~~~~r~~~ig~v~Q~~~~~l~~~~tv~e~l~~~~~~---------------~------------------- 134 (623)
T PRK10261 89 ELSEQSAAQMRHVRGADMAMIFQEPMTSLNPVFTVGEQIAESIRL---------------H------------------- 134 (623)
T ss_pred ccccCCHHHHHHHhCCCEEEEEeCchhhcCCCCCHHHHHHHHHHH---------------h-------------------
Confidence 12599999998 466778999998532100 0
Q ss_pred HHHHhhcCcccHHHHHHHHhhhcCCCc--cccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHH
Q 005532 224 QRKAQAVNLDTLDAKVSKLMPELGFTA--DDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGY 301 (692)
Q Consensus 224 ~~~~~~~~~~~~~~~i~~ll~~lgl~~--~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~ 301 (692)
..++.....+++.++|+.+|+.. ...++++.+|||||||||+|||||+.+|+||||||||++||+.+++.+.++
T Consensus 135 ----~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~~~~LSgGq~QRv~iA~AL~~~P~lLllDEPt~~LD~~~~~~l~~l 210 (623)
T PRK10261 135 ----QGASREEAMVEAKRMLDQVRIPEAQTILSRYPHQLSGGMRQRVMIAMALSCRPAVLIADEPTTALDVTIQAQILQL 210 (623)
T ss_pred ----cCCCHHHHHHHHHHHHHHCCCCChhhHHhCCCccCCHHHHHHHHHHHHHhCCCCEEEEeCCCCccCHHHHHHHHHH
Confidence 00112233456778899999963 356889999999999999999999999999999999999999998888877
Q ss_pred Hc----cCCCeEEEEecCHHHHHhhcCeEEEEecceEEEeccChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 005532 302 LG----KQDVPMVIISHDRAFLDQLCTKIVETEMGVSRTYEGNYSQYVLEKAAWIESQYAAWEKQQREIEQTKDLINRLG 377 (692)
Q Consensus 302 L~----~~~~tvI~vsHd~~~l~~~~d~i~~l~~G~~~~~~G~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~ 377 (692)
|+ +.|+|||+||||++++..+||+|++|++|++. ..|++.++..... ..+. ..++....
T Consensus 211 l~~l~~~~g~tvi~itHdl~~~~~~adri~vl~~G~i~-~~g~~~~~~~~~~-------~~~~---------~~l~~~~~ 273 (623)
T PRK10261 211 IKVLQKEMSMGVIFITHDMGVVAEIADRVLVMYQGEAV-ETGSVEQIFHAPQ-------HPYT---------RALLAAVP 273 (623)
T ss_pred HHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEeeCCeec-ccCCHHHhhcCCC-------Chhh---------hhhhhccC
Confidence 64 24899999999999999999999999999984 5677655432100 0000 00110000
Q ss_pred cC-CcchhhhHHHHHHHHHHHHhhhcccccccceeeecCCCCCCCCceEEEEeEEEEcCC-----------eecccceeE
Q 005532 378 AG-ANSGRASSAEKKLERLQEEEQIEKPFQRKQMKIRFPERGRSGRSVVTIKNLEFGYED-----------RLLFNRANL 445 (692)
Q Consensus 378 ~~-~~~~~~~~~~~~l~rl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~y~~-----------~~~l~~isl 445 (692)
.. ...++... ...+... ...+..... ..++.....+.++|+++||++.|+. ..+|+++||
T Consensus 274 ~~~~~~~~~~~--~~~~~~~----~~~~~~~~~--~~~~~~~~~~~~~L~~~~l~~~y~~~~~~~~~~~~~~~~l~~vs~ 345 (623)
T PRK10261 274 QLGAMKGLDYP--RRFPLIS----LEHPAKQEP--PIEQDTVVDGEPILQVRNLVTRFPLRSGLLNRVTREVHAVEKVSF 345 (623)
T ss_pred cccccccccCC--ccccccc----cccccccCc--ccccccccCCCceEEEeeeEEEEcCCCccccccCCceEEEeeeEe
Confidence 00 00000000 0000000 000000000 0001111124578999999999962 468999999
Q ss_pred EEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccc-------------eeeeecccchhhcCCCccHHHHHH
Q 005532 446 TIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNV-------------LPNYFEQNQAEALDLDKTVLETVA 512 (692)
Q Consensus 446 ~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~-------------~~~~~~q~~~~~l~~~~tv~e~~~ 512 (692)
+|++||++||+|+||||||||+++|+|+++|++|+|.++|.++ ..+|++|+....+++..|+.+++.
T Consensus 346 ~i~~Ge~~~lvG~nGsGKSTLlk~i~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~~~~i~~v~Q~~~~~l~~~~tv~~~l~ 425 (623)
T PRK10261 346 DLWPGETLSLVGESGSGKSTTGRALLRLVESQGGEIIFNGQRIDTLSPGKLQALRRDIQFIFQDPYASLDPRQTVGDSIM 425 (623)
T ss_pred EEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCCcEEEECCEECCcCCHHHHHHhcCCeEEEecCchhhcCCCCCHHHHHH
Confidence 9999999999999999999999999999999999999988643 246777764345777899999987
Q ss_pred HHh---cccc----HHHHHHHHhhcCCCcccccccCCCCCHHHHHHHHHHHHhccCCcEEEEeCCCCCCCHHHHHHHHHH
Q 005532 513 EAA---EDWR----IDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEA 585 (692)
Q Consensus 513 ~~~---~~~~----~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~LAral~~~p~lLlLDEPTn~LD~~~~~~l~~~ 585 (692)
... .... ...+.++|+.+|+.....++++.+|||||||||+|||||+.+|+||||||||++||+.++..+.++
T Consensus 426 ~~~~~~~~~~~~~~~~~~~~~L~~~gL~~~~~~~~~~~LSgGqrQRv~iAraL~~~p~llllDEPts~LD~~~~~~i~~l 505 (623)
T PRK10261 426 EPLRVHGLLPGKAAAARVAWLLERVGLLPEHAWRYPHEFSGGQRQRICIARALALNPKVIIADEAVSALDVSIRGQIINL 505 (623)
T ss_pred HHHHHcCCCCHHHHHHHHHHHHHHcCCCHHHhhCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHH
Confidence 532 1111 235778999999964567899999999999999999999999999999999999999999999999
Q ss_pred HHh----cCceEEEEecCHHHHHhhccEEEEEECCEEEEecCChhHHH
Q 005532 586 ISE----YKGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYYL 629 (692)
Q Consensus 586 l~~----~~~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~~~~ 629 (692)
|++ ++.|||+||||++++..+||+|++|++|+++. .|..+++.
T Consensus 506 l~~l~~~~g~tvi~isHdl~~v~~~~dri~vl~~G~iv~-~g~~~~i~ 552 (623)
T PRK10261 506 LLDLQRDFGIAYLFISHDMAVVERISHRVAVMYLGQIVE-IGPRRAVF 552 (623)
T ss_pred HHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEE-ecCHHHHh
Confidence 865 35699999999999999999999999999985 46665553
No 11
>PRK13549 xylose transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-80 Score=705.44 Aligned_cols=443 Identities=21% Similarity=0.299 Sum_probs=351.6
Q ss_pred CcEEEEeEEEEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCC--CccEEEECCCC-----------ce
Q 005532 96 SGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEP--DSGNVIKAKSN-----------MK 162 (692)
Q Consensus 96 ~~l~i~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p--~~G~I~~~~~~-----------~~ 162 (692)
++|+++|++++|+++++|+|+||+|++|++++|+||||||||||+++|+|+++| ++|+|.++|.. ..
T Consensus 4 ~~l~~~nl~~~~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 83 (506)
T PRK13549 4 YLLEMKNITKTFGGVKALDNVSLKVRAGEIVSLCGENGAGKSTLMKVLSGVYPHGTYEGEIIFEGEELQASNIRDTERAG 83 (506)
T ss_pred ceEEEeeeEEEeCCeEeecceeEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECCCCCHHHHHHCC
Confidence 469999999999988899999999999999999999999999999999999996 89999998732 34
Q ss_pred EEEEcccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHH
Q 005532 163 IAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKL 242 (692)
Q Consensus 163 i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l 242 (692)
|+|++|++.+++..||+||+...... ... ...+......++.++
T Consensus 84 i~~v~q~~~~~~~~tv~e~l~~~~~~---------------~~~---------------------~~~~~~~~~~~~~~~ 127 (506)
T PRK13549 84 IAIIHQELALVKELSVLENIFLGNEI---------------TPG---------------------GIMDYDAMYLRAQKL 127 (506)
T ss_pred eEEEEeccccCCCCcHHHHhhhcccc---------------ccc---------------------CCcCHHHHHHHHHHH
Confidence 99999999887889999998532100 000 000111223456788
Q ss_pred hhhcCCCccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHc---cCCCeEEEEecCHHHH
Q 005532 243 MPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG---KQDVPMVIISHDRAFL 319 (692)
Q Consensus 243 l~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~---~~~~tvI~vsHd~~~l 319 (692)
++.+|+. ...++++.+|||||||||+|||||+.+|+||||||||++||+.++.++.++|+ +.+.|||+||||++++
T Consensus 128 l~~~~l~-~~~~~~~~~LSgGqkqrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvi~~tH~~~~~ 206 (506)
T PRK13549 128 LAQLKLD-INPATPVGNLGLGQQQLVEIAKALNKQARLLILDEPTASLTESETAVLLDIIRDLKAHGIACIYISHKLNEV 206 (506)
T ss_pred HHHcCCC-CCcccchhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHHHH
Confidence 8999996 56789999999999999999999999999999999999999999999988774 3588999999999999
Q ss_pred HhhcCeEEEEecceEEEeccChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchhhhHHHHHHHHHHHHh
Q 005532 320 DQLCTKIVETEMGVSRTYEGNYSQYVLEKAAWIESQYAAWEKQQREIEQTKDLINRLGAGANSGRASSAEKKLERLQEEE 399 (692)
Q Consensus 320 ~~~~d~i~~l~~G~~~~~~G~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~l~rl~~~~ 399 (692)
..+||+|+++++|++. +.|...++... ..+..+... .. .+
T Consensus 207 ~~~~d~v~~l~~G~i~-~~~~~~~~~~~-----------------------~~~~~~~~~-~~----------~~----- 246 (506)
T PRK13549 207 KAISDTICVIRDGRHI-GTRPAAGMTED-----------------------DIITMMVGR-EL----------TA----- 246 (506)
T ss_pred HHhcCEEEEEECCEEe-eecccccCCHH-----------------------HHHHHhhCc-Cc----------cc-----
Confidence 9999999999999974 55543322100 001110000 00 00
Q ss_pred hhcccccccceeeecCCCCCCCCceEEEEeEEEEcC---CeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCC-
Q 005532 400 QIEKPFQRKQMKIRFPERGRSGRSVVTIKNLEFGYE---DRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEK- 475 (692)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~y~---~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~- 475 (692)
..+. +. ...+.++|+++|+++.|+ ++.+|+++||+|++||++||+|+||||||||+++|+|+++
T Consensus 247 --~~~~---------~~-~~~~~~~l~~~~l~~~~~~~~~~~vl~~vsl~i~~Ge~~~l~G~NGsGKSTLlk~i~Gl~~~ 314 (506)
T PRK13549 247 --LYPR---------EP-HTIGEVILEVRNLTAWDPVNPHIKRVDDVSFSLRRGEILGIAGLVGAGRTELVQCLFGAYPG 314 (506)
T ss_pred --cccc---------cc-cCCCCceEEEecCccccccccccccccceeeEEcCCcEEEEeCCCCCCHHHHHHHHhCCCCC
Confidence 0000 00 112356799999999994 4579999999999999999999999999999999999998
Q ss_pred CCeeEEEECCccce-----------eeeecccch-hhcCCCccHHHHHHHHh--c--c---cc----HHHHHHHHhhcCC
Q 005532 476 PRGGEVLLGEHNVL-----------PNYFEQNQA-EALDLDKTVLETVAEAA--E--D---WR----IDDIKGLLGRCNF 532 (692)
Q Consensus 476 p~~G~i~~~~~~~~-----------~~~~~q~~~-~~l~~~~tv~e~~~~~~--~--~---~~----~~~~~~~L~~~~l 532 (692)
|++|+|.++|.++. .+|+.|... ..+.+..|+.+|+.... . . .. ...+.++++.+++
T Consensus 315 ~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l 394 (506)
T PRK13549 315 RWEGEIFIDGKPVKIRNPQQAIAQGIAMVPEDRKRDGIVPVMGVGKNITLAALDRFTGGSRIDDAAELKTILESIQRLKV 394 (506)
T ss_pred CCCcEEEECCEECCCCCHHHHHHCCCEEeCcchhhCCCcCCCCHHHHhhhhhhhhhccCcccChHHHHHHHHHHHHhcCc
Confidence 59999999886542 356666532 23566789999986431 0 0 01 1357789999999
Q ss_pred CcccccccCCCCCHHHHHHHHHHHHhccCCcEEEEeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhccE
Q 005532 533 KADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNR 609 (692)
Q Consensus 533 ~~~~~~~~~~~LSgGqkqrv~LAral~~~p~lLlLDEPTn~LD~~~~~~l~~~l~~~---~~tviivSHd~~~l~~~~d~ 609 (692)
.....++++.+|||||||||+|||||+.+|+||||||||++||+.+++.+.++|.++ +.|||+||||++++.++||+
T Consensus 395 ~~~~~~~~~~~LSgG~kqrv~lA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvi~~sHd~~~~~~~~d~ 474 (506)
T PRK13549 395 KTASPELAIARLSGGNQQKAVLAKCLLLNPKILILDEPTRGIDVGAKYEIYKLINQLVQQGVAIIVISSELPEVLGLSDR 474 (506)
T ss_pred cCCCcccccccCCHHHHHHHHHHHHHhhCCCEEEEcCCCCCcCHhHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHhCCE
Confidence 534678999999999999999999999999999999999999999999999988754 56999999999999999999
Q ss_pred EEEEECCEEEEecCChhHH
Q 005532 610 VVEVKGSNLQDYAGDYNYY 628 (692)
Q Consensus 610 i~~l~~g~l~~~~g~~~~~ 628 (692)
+++|++|++. ..|..+++
T Consensus 475 v~~l~~G~i~-~~~~~~~~ 492 (506)
T PRK13549 475 VLVMHEGKLK-GDLINHNL 492 (506)
T ss_pred EEEEECCEEE-EEeccccC
Confidence 9999999987 44555544
No 12
>PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional
Probab=100.00 E-value=5.5e-80 Score=700.17 Aligned_cols=442 Identities=25% Similarity=0.352 Sum_probs=350.9
Q ss_pred CCCcEEEEeEEEEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC-----------ce
Q 005532 94 ISSGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN-----------MK 162 (692)
Q Consensus 94 ~~~~l~i~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~-----------~~ 162 (692)
+.++|+++|++++|+++++|+|+||+|++|++++|+|||||||||||++|+|+++|++|+|.++|.. ..
T Consensus 8 ~~~~l~~~~l~~~~~~~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~ 87 (510)
T PRK15439 8 APPLLCARSISKQYSGVEVLKGIDFTLHAGEVHALLGGNGAGKSTLMKIIAGIVPPDSGTLEIGGNPCARLTPAKAHQLG 87 (510)
T ss_pred CCceEEEEeEEEEeCCceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCCCCHHHHHhCC
Confidence 3457999999999998889999999999999999999999999999999999999999999998732 24
Q ss_pred EEEEcccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHH
Q 005532 163 IAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKL 242 (692)
Q Consensus 163 i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l 242 (692)
|+|++|++.+++..||.+|+...... ....+.++.++
T Consensus 88 i~~v~q~~~~~~~~tv~e~l~~~~~~-------------------------------------------~~~~~~~~~~~ 124 (510)
T PRK15439 88 IYLVPQEPLLFPNLSVKENILFGLPK-------------------------------------------RQASMQKMKQL 124 (510)
T ss_pred EEEEeccCccCCCCcHHHHhhccccc-------------------------------------------chHHHHHHHHH
Confidence 99999999888889999998532100 00123456677
Q ss_pred hhhcCCCccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHc---cCCCeEEEEecCHHHH
Q 005532 243 MPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG---KQDVPMVIISHDRAFL 319 (692)
Q Consensus 243 l~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~---~~~~tvI~vsHd~~~l 319 (692)
++.+|+. ...++++.+|||||||||+|||||+.+|+||||||||+|||+.+++++.++|+ +.|+|||+||||++++
T Consensus 125 l~~~~l~-~~~~~~~~~LSgG~~qrv~la~aL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiivtHd~~~~ 203 (510)
T PRK15439 125 LAALGCQ-LDLDSSAGSLEVADRQIVEILRGLMRDSRILILDEPTASLTPAETERLFSRIRELLAQGVGIVFISHKLPEI 203 (510)
T ss_pred HHHcCCC-ccccCChhhCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence 8889996 56789999999999999999999999999999999999999999999998875 3589999999999999
Q ss_pred HhhcCeEEEEecceEEEeccChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchhhhHHHHHHHHHHHHh
Q 005532 320 DQLCTKIVETEMGVSRTYEGNYSQYVLEKAAWIESQYAAWEKQQREIEQTKDLINRLGAGANSGRASSAEKKLERLQEEE 399 (692)
Q Consensus 320 ~~~~d~i~~l~~G~~~~~~G~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~l~rl~~~~ 399 (692)
..+||+|+++++|++. +.|++.++..... ++.+........ +....
T Consensus 204 ~~~~d~i~~l~~G~i~-~~g~~~~~~~~~~-----------------------~~~~~~~~~~~~-------~~~~~--- 249 (510)
T PRK15439 204 RQLADRISVMRDGTIA-LSGKTADLSTDDI-----------------------IQAITPAAREKS-------LSASQ--- 249 (510)
T ss_pred HHhCCEEEEEECCEEE-EecChHHcCHHHH-----------------------HHHHhCcccccc-------ccccc---
Confidence 9999999999999984 6788766532110 000000000000 00000
Q ss_pred hhcccccccceeeecCC---CCCCCCceEEEEeEEEEcCCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCC
Q 005532 400 QIEKPFQRKQMKIRFPE---RGRSGRSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKP 476 (692)
Q Consensus 400 ~~~~~~~~~~~~~~~~~---~~~~~~~~l~~~~l~~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p 476 (692)
.. ...+|. ....+.++|+++|+++ .+|+++||+|++|+++||+||||||||||+++|+|+++|
T Consensus 250 ---~~------~~~~~~~~~~~~~~~~~l~~~~l~~-----~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~Gl~~p 315 (510)
T PRK15439 250 ---KL------WLELPGNRRQQAAGAPVLTVEDLTG-----EGFRNISLEVRAGEILGLAGVVGAGRTELAETLYGLRPA 315 (510)
T ss_pred ---cc------cccccccccccCCCCceEEEeCCCC-----CCccceeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCC
Confidence 00 000110 1112456899999984 269999999999999999999999999999999999999
Q ss_pred CeeEEEECCccc-----------eeeeecccch-hhcCCCccHHHHHHHH----hcc---c--cHHHHHHHHhhcCCCcc
Q 005532 477 RGGEVLLGEHNV-----------LPNYFEQNQA-EALDLDKTVLETVAEA----AED---W--RIDDIKGLLGRCNFKAD 535 (692)
Q Consensus 477 ~~G~i~~~~~~~-----------~~~~~~q~~~-~~l~~~~tv~e~~~~~----~~~---~--~~~~~~~~L~~~~l~~~ 535 (692)
++|+|.++|.++ ..+|++|... ..+++..|+.+++... ... . ....+.++|+.+++...
T Consensus 316 ~~G~i~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~l~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~ 395 (510)
T PRK15439 316 RGGRIMLNGKEINALSTAQRLARGLVYLPEDRQSSGLYLDAPLAWNVCALTHNRRGFWIKPARENAVLERYRRALNIKFN 395 (510)
T ss_pred CCcEEEECCEECCCCCHHHHHhCCcEECCCChhhCCccCCCcHHHHHHhhhhhhhccccChHHHHHHHHHHHHHcCCCCC
Confidence 999999988643 1356666531 3466678999987532 010 1 11246789999999534
Q ss_pred cccccCCCCCHHHHHHHHHHHHhccCCcEEEEeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhccEEEE
Q 005532 536 MLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVE 612 (692)
Q Consensus 536 ~~~~~~~~LSgGqkqrv~LAral~~~p~lLlLDEPTn~LD~~~~~~l~~~l~~~---~~tviivSHd~~~l~~~~d~i~~ 612 (692)
..++++.+|||||||||+|||||+.+|+||||||||+|||+.+++.+.+.|+++ +.|||+||||++++.++||++++
T Consensus 396 ~~~~~~~~LSgG~kqrl~la~al~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~~g~tiIivsHd~~~i~~~~d~i~~ 475 (510)
T PRK15439 396 HAEQAARTLSGGNQQKVLIAKCLEASPQLLIVDEPTRGVDVSARNDIYQLIRSIAAQNVAVLFISSDLEEIEQMADRVLV 475 (510)
T ss_pred CccCccccCCcHHHHHHHHHHHHhhCCCEEEECCCCcCcChhHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEE
Confidence 679999999999999999999999999999999999999999999999998864 56999999999999999999999
Q ss_pred EECCEEEEecCChhHH
Q 005532 613 VKGSNLQDYAGDYNYY 628 (692)
Q Consensus 613 l~~g~l~~~~g~~~~~ 628 (692)
|++|++.. .|.-+++
T Consensus 476 l~~G~i~~-~~~~~~~ 490 (510)
T PRK15439 476 MHQGEISG-ALTGAAI 490 (510)
T ss_pred EECCEEEE-EEccccC
Confidence 99999984 3444433
No 13
>TIGR03269 met_CoM_red_A2 methyl coenzyme M reductase system, component A2. The enzyme that catalyzes the final step in methanogenesis, methyl coenzyme M reductase, contains alpha, beta, and gamma chains. In older literature, the complex of alpha, beta, and gamma chains was termed component C, while this single chain protein was termed methyl coenzyme M reductase system component A2.
Probab=100.00 E-value=1.2e-79 Score=699.79 Aligned_cols=430 Identities=27% Similarity=0.421 Sum_probs=346.3
Q ss_pred EEEEeEEEEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCC--CCCccEEEECC-----------------
Q 005532 98 VKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQE--EPDSGNVIKAK----------------- 158 (692)
Q Consensus 98 l~i~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~--~p~~G~I~~~~----------------- 158 (692)
|+++|++++|+++++|+|+||+|++|++++|+||||||||||+++|+|++ +|++|+|.+++
T Consensus 1 l~~~~l~~~~~~~~~l~~is~~i~~Ge~~~iiG~nGsGKSTLl~~l~Gl~~~~p~~G~i~~~~~~~~~~~~~~~~~~~g~ 80 (520)
T TIGR03269 1 IEVKNLTKKFDGKEVLKNISFTIEEGEVLGILGRSGAGKSVLMHVLRGMDQYEPTSGRIIYHVALCEKCGYVERPSKVGE 80 (520)
T ss_pred CEEEEEEEEECCeEeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhhcccCCCCceEEEEecccccccccccccccccc
Confidence 57899999998888999999999999999999999999999999999997 79999998851
Q ss_pred ------C--------------------CceEEEEccc-CccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhH
Q 005532 159 ------S--------------------NMKIAFLSQE-FEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMD 211 (692)
Q Consensus 159 ------~--------------------~~~i~~v~Q~-~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 211 (692)
. ...++|++|+ +.+++..|+.+|+...+..
T Consensus 81 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~~~l~~~~~~----------------------- 137 (520)
T TIGR03269 81 PCPVCGGTLEPEEVDFWNLSDKLRRRIRKRIAIMLQRTFALYGDDTVLDNVLEALEE----------------------- 137 (520)
T ss_pred ccccccccccccchhhhccCHHHHHHhhhcEEEEeccccccCCCCCHHHHHHHHHHH-----------------------
Confidence 0 1248999997 5666678999998532100
Q ss_pred HHHHHHHHHHHHHHHHhhcCcccHHHHHHHHhhhcCCCccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCC
Q 005532 212 LMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLD 291 (692)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD 291 (692)
...+......++.++++.+|+. ...++++.+|||||||||+|||||+.+|+||||||||++||
T Consensus 138 ----------------~~~~~~~~~~~~~~~l~~~gl~-~~~~~~~~~LSgGq~qrv~iA~al~~~p~lllLDEPt~~LD 200 (520)
T TIGR03269 138 ----------------IGYEGKEAVGRAVDLIEMVQLS-HRITHIARDLSGGEKQRVVLARQLAKEPFLFLADEPTGTLD 200 (520)
T ss_pred ----------------cCCCHHHHHHHHHHHHHHcCCh-hhhhcCcccCCHHHHHHHHHHHHHhcCCCEEEeeCCcccCC
Confidence 0011122345677889999996 56788999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHc----cCCCeEEEEecCHHHHHhhcCeEEEEecceEEEeccChHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 005532 292 LDTIEWLEGYLG----KQDVPMVIISHDRAFLDQLCTKIVETEMGVSRTYEGNYSQYVLEKAAWIESQYAAWEKQQREIE 367 (692)
Q Consensus 292 ~~~~~~L~~~L~----~~~~tvI~vsHd~~~l~~~~d~i~~l~~G~~~~~~G~y~~~~~~~~~~~~~~~~~~~~~~~~~~ 367 (692)
+.+++++.++|+ +.|+|||+||||++++..+||+|++|++|++. +.|++.++.....
T Consensus 201 ~~~~~~l~~~l~~l~~~~g~tviivtHd~~~~~~~~d~i~~l~~G~i~-~~g~~~~~~~~~~------------------ 261 (520)
T TIGR03269 201 PQTAKLVHNALEEAVKASGISMVLTSHWPEVIEDLSDKAIWLENGEIK-EEGTPDEVVAVFM------------------ 261 (520)
T ss_pred HHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhcCEEEEEeCCEEe-eecCHHHHHHHHH------------------
Confidence 999999977663 35899999999999999999999999999984 5688765432100
Q ss_pred HHHHHHHHhccCCcchhhhHHHHHHHHHHHHhhhcccccccceeeecCCCCCCCCceEEEEeEEEEcC-----Ceecccc
Q 005532 368 QTKDLINRLGAGANSGRASSAEKKLERLQEEEQIEKPFQRKQMKIRFPERGRSGRSVVTIKNLEFGYE-----DRLLFNR 442 (692)
Q Consensus 368 ~~~~~i~~l~~~~~~~~~~~~~~~l~rl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~y~-----~~~~l~~ 442 (692)
.... .. .++ + ....+.++|+++||++.|+ ++.+|++
T Consensus 262 ------~~~~----------------~~------~~~----------~-~~~~~~~~l~~~~l~~~~~~~~~~~~~il~~ 302 (520)
T TIGR03269 262 ------EGVS----------------EV------EKE----------C-EVEVGEPIIKVRNVSKRYISVDRGVVKAVDN 302 (520)
T ss_pred ------hhch----------------hh------ccc----------c-ccCCCCceEEEeccEEEeccCCCCCceEEee
Confidence 0000 00 000 0 0011345899999999995 2579999
Q ss_pred eeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEEC-Ccc---c-------------eeeeecccchhhcCCCc
Q 005532 443 ANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLG-EHN---V-------------LPNYFEQNQAEALDLDK 505 (692)
Q Consensus 443 isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~-~~~---~-------------~~~~~~q~~~~~l~~~~ 505 (692)
+||+|++|+++||+||||||||||+++|+|+++|++|+|.++ |.+ + ..+|++|+. .+.+..
T Consensus 303 is~~i~~Ge~~~l~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~~g~~~~~~~~~~~~~~~~~~~~i~~v~q~~--~l~~~~ 380 (520)
T TIGR03269 303 VSLEVKEGEIFGIVGTSGAGKTTLSKIIAGVLEPTSGEVNVRVGDEWVDMTKPGPDGRGRAKRYIGILHQEY--DLYPHR 380 (520)
T ss_pred EEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEEecCCccccccccchhhHHHHhhhEEEEccCc--ccCCCC
Confidence 999999999999999999999999999999999999999994 421 1 145777653 466778
Q ss_pred cHHHHHHHHhc--c-c--cHHHHHHHHhhcCCCc----ccccccCCCCCHHHHHHHHHHHHhccCCcEEEEeCCCCCCCH
Q 005532 506 TVLETVAEAAE--D-W--RIDDIKGLLGRCNFKA----DMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDI 576 (692)
Q Consensus 506 tv~e~~~~~~~--~-~--~~~~~~~~L~~~~l~~----~~~~~~~~~LSgGqkqrv~LAral~~~p~lLlLDEPTn~LD~ 576 (692)
|+.+++..... . . ....+.++++.+++.. +..++++.+|||||||||+|||||+.+|+||||||||++||+
T Consensus 381 tv~e~l~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LSgGq~qrv~laral~~~p~lLllDEPt~~LD~ 460 (520)
T TIGR03269 381 TVLDNLTEAIGLELPDELARMKAVITLKMVGFDEEKAEEILDKYPDELSEGERHRVALAQVLIKEPRIVILDEPTGTMDP 460 (520)
T ss_pred cHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCCCCccchhhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCH
Confidence 99999975321 1 1 1235678899999963 246899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHh----cCceEEEEecCHHHHHhhccEEEEEECCEEEEecCChhHH
Q 005532 577 PSKEMLEEAISE----YKGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYY 628 (692)
Q Consensus 577 ~~~~~l~~~l~~----~~~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~~~ 628 (692)
.+++.+.+.|++ ++.|||+||||++++.++||+|++|++|++.. .|..++.
T Consensus 461 ~~~~~l~~~l~~l~~~~g~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~-~g~~~~~ 515 (520)
T TIGR03269 461 ITKVDVTHSILKAREEMEQTFIIVSHDMDFVLDVCDRAALMRDGKIVK-IGDPEEI 515 (520)
T ss_pred HHHHHHHHHHHHHHHHcCcEEEEEeCCHHHHHHhCCEEEEEECCEEEE-ECCHHHH
Confidence 999999999864 35699999999999999999999999999974 4655544
No 14
>PRK15134 microcin C ABC transporter ATP-binding protein YejF; Provisional
Probab=100.00 E-value=1.8e-79 Score=699.56 Aligned_cols=444 Identities=20% Similarity=0.356 Sum_probs=349.2
Q ss_pred CcEEEEeEEEEeCC----eeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCC-----CccEEEECCCC------
Q 005532 96 SGVKLENISKSYKG----VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEP-----DSGNVIKAKSN------ 160 (692)
Q Consensus 96 ~~l~i~~ls~~y~~----~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p-----~~G~I~~~~~~------ 160 (692)
++|+++|++++|++ +++|+|+||+|.+||+++|+||||||||||+++|+|+++| ++|+|.++|.+
T Consensus 4 ~~l~~~~l~~~~~~~~~~~~~l~~isl~i~~Ge~~~iiG~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~ 83 (529)
T PRK15134 4 PLLAIENLSVAFRQQQTVRTVVNDVSLQIEAGETLALVGESGSGKSVTALSILRLLPSPPVVYPSGDIRFHGESLLHASE 83 (529)
T ss_pred ceEEEeceEEEecCCCCceeeeeceEEEEeCCCEEEEECCCCCcHHHHHHHHhcCCCCCcCCccceEEEECCEecccCCH
Confidence 36999999999963 5799999999999999999999999999999999999986 79999987632
Q ss_pred --------ceEEEEcccCc--cCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhc
Q 005532 161 --------MKIAFLSQEFE--VSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAV 230 (692)
Q Consensus 161 --------~~i~~v~Q~~~--~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (692)
..|||++|++. +.+..|+.+++..... .. ...
T Consensus 84 ~~~~~~~~~~ig~v~Q~~~~~~~~~~~~~~~~~~~~~---------------~~-----------------------~~~ 125 (529)
T PRK15134 84 QTLRGVRGNKIAMIFQEPMVSLNPLHTLEKQLYEVLS---------------LH-----------------------RGM 125 (529)
T ss_pred HHHHHHhcCceEEEecCchhhcCchhhHHHHHHHHHH---------------Hh-----------------------cCC
Confidence 25999999975 4445688887642110 00 001
Q ss_pred CcccHHHHHHHHhhhcCCCcc--ccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc----
Q 005532 231 NLDTLDAKVSKLMPELGFTAD--DGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK---- 304 (692)
Q Consensus 231 ~~~~~~~~i~~ll~~lgl~~~--~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~---- 304 (692)
..+....++.++++.+|+... ..++++.+|||||||||+|||||+.+|+||||||||++||+.+++++.++|++
T Consensus 126 ~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~LSgGe~qrv~iAraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~ 205 (529)
T PRK15134 126 RREAARGEILNCLDRVGIRQAAKRLTDYPHQLSGGERQRVMIAMALLTRPELLIADEPTTALDVSVQAQILQLLRELQQE 205 (529)
T ss_pred CHHHHHHHHHHHHHHCCCCChHHHHhhCCcccCHHHHHHHHHHHHHhcCCCEEEEcCCCCccCHHHHHHHHHHHHHHHHh
Confidence 112234567788999999631 35889999999999999999999999999999999999999999999988754
Q ss_pred CCCeEEEEecCHHHHHhhcCeEEEEecceEEEeccChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchh
Q 005532 305 QDVPMVIISHDRAFLDQLCTKIVETEMGVSRTYEGNYSQYVLEKAAWIESQYAAWEKQQREIEQTKDLINRLGAGANSGR 384 (692)
Q Consensus 305 ~~~tvI~vsHd~~~l~~~~d~i~~l~~G~~~~~~G~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~ 384 (692)
.++|||+||||++++..+||+|++|++|++. +.|...++..... ..+ ....+..
T Consensus 206 ~g~tvi~vtHd~~~~~~~~dri~~l~~G~i~-~~g~~~~~~~~~~-------~~~---------~~~~~~~--------- 259 (529)
T PRK15134 206 LNMGLLFITHNLSIVRKLADRVAVMQNGRCV-EQNRAATLFSAPT-------HPY---------TQKLLNS--------- 259 (529)
T ss_pred cCCeEEEEcCcHHHHHHhcCEEEEEECCEEE-EeCCHHHHhhCCC-------CHH---------HHHHHHh---------
Confidence 4899999999999999999999999999974 4565433221000 000 0000000
Q ss_pred hhHHHHHHHHHHHHhhhcccccccceeeecCCCCCCCCceEEEEeEEEEcC-----------CeecccceeEEEeCCCEE
Q 005532 385 ASSAEKKLERLQEEEQIEKPFQRKQMKIRFPERGRSGRSVVTIKNLEFGYE-----------DRLLFNRANLTIERGEKT 453 (692)
Q Consensus 385 ~~~~~~~l~rl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~y~-----------~~~~l~~isl~i~~Ge~v 453 (692)
.+... . . +. ...+.++|+++|+++.|+ ++.+|+++||+|++|+++
T Consensus 260 ------------------~~~~~-~--~--~~-~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~il~~isl~i~~Ge~~ 315 (529)
T PRK15134 260 ------------------EPSGD-P--V--PL-PEPASPLLDVEQLQVAFPIRKGILKRTVDHNVVVKNISFTLRPGETL 315 (529)
T ss_pred ------------------Ccccc-c--c--cc-CCCCCCcccccCcEEEeecCccccccccccceeeecceeEEcCCCEE
Confidence 00000 0 0 00 112456799999999995 357999999999999999
Q ss_pred EEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccc-------------eeeeecccchhhcCCCccHHHHHHHHhc----
Q 005532 454 AIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNV-------------LPNYFEQNQAEALDLDKTVLETVAEAAE---- 516 (692)
Q Consensus 454 ~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~-------------~~~~~~q~~~~~l~~~~tv~e~~~~~~~---- 516 (692)
||+||||||||||+++|+|++ |++|+|.++|.++ ..+|++|+....+.+..|+.+|+.....
T Consensus 316 ~i~G~nGsGKSTLlk~l~Gl~-~~~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~l~~~~tv~e~l~~~~~~~~~ 394 (529)
T PRK15134 316 GLVGESGSGKSTTGLALLRLI-NSQGEIWFDGQPLHNLNRRQLLPVRHRIQVVFQDPNSSLNPRLNVLQIIEEGLRVHQP 394 (529)
T ss_pred EEECCCCCCHHHHHHHHhCcC-CCCcEEEECCEEccccchhhHHHhhhceEEEEeCchhhcCCcccHHHHHHHHHHhccc
Confidence 999999999999999999998 4899999988543 1357777643346677899999976421
Q ss_pred --ccc--HHHHHHHHhhcCCCcccccccCCCCCHHHHHHHHHHHHhccCCcEEEEeCCCCCCCHHHHHHHHHHHHhc---
Q 005532 517 --DWR--IDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY--- 589 (692)
Q Consensus 517 --~~~--~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~LAral~~~p~lLlLDEPTn~LD~~~~~~l~~~l~~~--- 589 (692)
... ...+.++|+.+++.....++++.+|||||||||+|||||+.+|+||||||||++||+.+++.+.+.|+++
T Consensus 395 ~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~ 474 (529)
T PRK15134 395 TLSAAQREQQVIAVMEEVGLDPETRHRYPAEFSGGQRQRIAIARALILKPSLIILDEPTSSLDKTVQAQILALLKSLQQK 474 (529)
T ss_pred cCChHHHHHHHHHHHHHcCCCHHHHhcCCccCCHHHHHHHHHHHHHhCCCCEEEeeCCccccCHHHHHHHHHHHHHHHHh
Confidence 011 2357789999999534578999999999999999999999999999999999999999999999999754
Q ss_pred -CceEEEEecCHHHHHhhccEEEEEECCEEEEecCChhHHH
Q 005532 590 -KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYYL 629 (692)
Q Consensus 590 -~~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~~~~ 629 (692)
+.|||+||||++++..+||+|++|++|++.. .|..+++.
T Consensus 475 ~~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~-~~~~~~~~ 514 (529)
T PRK15134 475 HQLAYLFISHDLHVVRALCHQVIVLRQGEVVE-QGDCERVF 514 (529)
T ss_pred hCCEEEEEeCCHHHHHHhcCeEEEEECCEEEE-EcCHHHHh
Confidence 5699999999999999999999999999974 46665553
No 15
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]
Probab=100.00 E-value=2.3e-79 Score=670.64 Aligned_cols=452 Identities=23% Similarity=0.373 Sum_probs=360.2
Q ss_pred CcEEEEeEEEEeCCe----eceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCC----ccEEEECCCC-------
Q 005532 96 SGVKLENISKSYKGV----TVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPD----SGNVIKAKSN------- 160 (692)
Q Consensus 96 ~~l~i~~ls~~y~~~----~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~----~G~I~~~~~~------- 160 (692)
+.|+++|+++.|... ++++||||+|.+||++||||.+||||||+.++|.|++++. +|+|.++|.+
T Consensus 4 ~lL~V~nL~v~~~~~~~~~~~v~~vsf~v~~GE~lgIvGESGsGKSt~a~~i~gll~~~~~~~~G~I~~~g~dl~~l~~~ 83 (539)
T COG1123 4 PLLEVENLTVEFATDGGRVPAVRDVSFEVEPGEILGIVGESGSGKSTLALALMGLLPEGGRITSGEVILDGRDLLGLSER 83 (539)
T ss_pred ceEEEeceEEEEecCCcceeeeecceEEecCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcccceEEEECCcchhcCCHH
Confidence 379999999999543 5999999999999999999999999999999999999987 7999998742
Q ss_pred -------ceEEEEcccCcc--CCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcC
Q 005532 161 -------MKIAFLSQEFEV--SMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVN 231 (692)
Q Consensus 161 -------~~i~~v~Q~~~~--~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (692)
..|+|++|+|.- .+..||.+-|...+. ......
T Consensus 84 ~~r~~rg~~Ia~i~Q~p~~slnP~~tIg~Qi~E~~~--------------------------------------~h~~~~ 125 (539)
T COG1123 84 EMRKLRGKRIAMIFQDPMTSLNPVMTIGDQIREALR--------------------------------------LHGKGS 125 (539)
T ss_pred HHHHhccccEEEEecCchhhcCchhhHHHHHHHHHH--------------------------------------Hhcccc
Confidence 369999999853 344576655532110 000111
Q ss_pred cccHHHHHHHHhhhcCCCcccc-ccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHc----cCC
Q 005532 232 LDTLDAKVSKLMPELGFTADDG-DRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG----KQD 306 (692)
Q Consensus 232 ~~~~~~~i~~ll~~lgl~~~~~-~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~----~~~ 306 (692)
..+..+++.++|+.+|+++... ++++.+|||||||||.||+||+.+|++||+||||++||+.+..++.++|+ +.|
T Consensus 126 ~~ea~~~a~elL~~Vgl~~~~~~~~yPheLSGG~rQRv~iAmALa~~P~LLIaDEPTTaLDvt~q~qIL~llk~l~~e~g 205 (539)
T COG1123 126 RAEARKRAVELLEQVGLPDPERRDRYPHQLSGGMRQRVMIAMALALKPKLLIADEPTTALDVTTQAQILDLLKDLQRELG 205 (539)
T ss_pred HHHHHHHHHHHHHHcCCCChhhhccCCcccCchHHHHHHHHHHHhCCCCEEEECCCccccCHHHHHHHHHHHHHHHHHcC
Confidence 3445678889999999986555 47999999999999999999999999999999999999999999988774 579
Q ss_pred CeEEEEecCHHHHHhhcCeEEEEecceEEEeccChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchhhh
Q 005532 307 VPMVIISHDRAFLDQLCTKIVETEMGVSRTYEGNYSQYVLEKAAWIESQYAAWEKQQREIEQTKDLINRLGAGANSGRAS 386 (692)
Q Consensus 307 ~tvI~vsHd~~~l~~~~d~i~~l~~G~~~~~~G~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~ 386 (692)
.++|+||||+..+.++||+|++|.+|++. -.|..++.+..- ...| +..++....
T Consensus 206 ~a~l~ITHDl~Vva~~aDrv~Vm~~G~iV-E~G~~~~i~~~p-------~hpY---------T~~Ll~a~p--------- 259 (539)
T COG1123 206 MAVLFITHDLGVVAELADRVVVMYKGEIV-ETGPTEEILSNP-------QHPY---------TRGLLAAVP--------- 259 (539)
T ss_pred cEEEEEcCCHHHHHHhcCeEEEEECCEEE-EecCHHHHHhcc-------CCcc---------cHHHHhhCC---------
Confidence 99999999999999999999999999984 446543322110 0000 001111100
Q ss_pred HHHHHHHHHHHHhhhcccccccceeeecCCCCCCCCceEEEEeEEEEcCC-----------eecccceeEEEeCCCEEEE
Q 005532 387 SAEKKLERLQEEEQIEKPFQRKQMKIRFPERGRSGRSVVTIKNLEFGYED-----------RLLFNRANLTIERGEKTAI 455 (692)
Q Consensus 387 ~~~~~l~rl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~y~~-----------~~~l~~isl~i~~Ge~v~l 455 (692)
.....+..... +.......++++++||++.|.. ..+++||||+|.+||++||
T Consensus 260 ----------------~~~~~~~~~~~-~~~~~~~~~ll~V~~l~k~y~~~~~~~~~~~~~~~Av~~VSf~l~~GE~lgl 322 (539)
T COG1123 260 ----------------RLGDEKIIRLP-RRGPLRAEPLLSVRNLSKRYGSRKGLFVRERGEVKAVDDVSFDLREGETLGL 322 (539)
T ss_pred ----------------Ccccccccccc-cccccccCceeEeeeeeeeeccccccccccccceeeeeeeeeEecCCCEEEE
Confidence 00000000000 0011126788999999999973 2579999999999999999
Q ss_pred EcCCCCcHHHHHHHHhcCCCCCeeEEEECCccc------------eeeeecccchhhcCCCccHHHHHHHHhccc-----
Q 005532 456 IGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNV------------LPNYFEQNQAEALDLDKTVLETVAEAAEDW----- 518 (692)
Q Consensus 456 vG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~------------~~~~~~q~~~~~l~~~~tv~e~~~~~~~~~----- 518 (692)
||++|||||||.|+|+|+++|++|+|.++|.++ ....++|++...++|.+||.+.+.......
T Consensus 323 VGeSGsGKSTlar~i~gL~~P~~G~i~~~g~~~~~~~~~~~~~r~~~QmvFQdp~~SLnPr~tV~~~i~epL~~~~~~~~ 402 (539)
T COG1123 323 VGESGSGKSTLARILAGLLPPSSGSIIFDGQDLDLTGGELRRLRRRIQMVFQDPYSSLNPRMTVGDILAEPLRIHGGGSG 402 (539)
T ss_pred ECCCCCCHHHHHHHHhCCCCCCCceEEEeCcccccccchhhhhhhheEEEEeCcccccCccccHHHHHHhHHhhhcccch
Confidence 999999999999999999999999999988652 245678888889999999999987654211
Q ss_pred --cHHHHHHHHhhcCCCcccccccCCCCCHHHHHHHHHHHHhccCCcEEEEeCCCCCCCHHHHHHHHHHHHh----cCce
Q 005532 519 --RIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISE----YKGT 592 (692)
Q Consensus 519 --~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~LAral~~~p~lLlLDEPTn~LD~~~~~~l~~~l~~----~~~t 592 (692)
..+.+.++|+..+++...+++++++||||||||+||||||+.+|++||+||||+.||+.....+.++|.+ ++.|
T Consensus 403 ~~~~~rv~~ll~~VgL~~~~l~ryP~elSGGQrQRvaIARALa~~P~lli~DEp~SaLDvsvqa~VlnLl~~lq~e~g~t 482 (539)
T COG1123 403 AERRARVAELLELVGLPPEFLDRYPHELSGGQRQRVAIARALALEPKLLILDEPVSALDVSVQAQVLNLLKDLQEELGLT 482 (539)
T ss_pred HHHHHHHHHHHHHcCCCHHHHhcCchhcCcchhHHHHHHHHHhcCCCEEEecCCccccCHHHHHHHHHHHHHHHHHhCCE
Confidence 1234788899999998789999999999999999999999999999999999999999999999988864 4669
Q ss_pred EEEEecCHHHHHhhccEEEEEECCEEEEecCChhHHH
Q 005532 593 VITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYYL 629 (692)
Q Consensus 593 viivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~~~~ 629 (692)
+|+||||+.++..+||||++|++|++++. |+-+...
T Consensus 483 ~lfISHDl~vV~~i~drv~vm~~G~iVE~-G~~~~v~ 518 (539)
T COG1123 483 YLFISHDLAVVRYIADRVAVMYDGRIVEE-GPTEKVF 518 (539)
T ss_pred EEEEeCCHHHHHhhCceEEEEECCeEEEe-CCHHHHh
Confidence 99999999999999999999999999975 4544443
No 16
>TIGR02633 xylG D-xylose ABC transporter, ATP-binding protein. Several bacterial species have enzymes xylose isomerase and xylulokinase enzymes for xylose utilization. Members of this protein family are the ATP-binding cassette (ABC) subunit of the known or predicted high-affinity xylose ABC transporter for xylose import. These genes, which closely resemble other sugar transport ABC transporter genes, typically are encoded near xylose utilization enzymes and regulatory proteins. Note that this form of the transporter contains two copies of the ABC transporter domain (pfam00005).
Probab=100.00 E-value=1.5e-79 Score=695.98 Aligned_cols=436 Identities=23% Similarity=0.336 Sum_probs=344.3
Q ss_pred cEEEEeEEEEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCC--CccEEEECCCC-----------ceE
Q 005532 97 GVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEP--DSGNVIKAKSN-----------MKI 163 (692)
Q Consensus 97 ~l~i~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p--~~G~I~~~~~~-----------~~i 163 (692)
.|+++|++++|+++++|+|+||+|++|++++|+||||||||||+++|+|+++| ++|+|.++|.. ..|
T Consensus 1 ~l~i~~l~~~~~~~~il~~isl~i~~Ge~~~liG~nGsGKSTLl~~i~G~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~i 80 (500)
T TIGR02633 1 LLEMKGIVKTFGGVKALDGIDLEVRPGECVGLCGENGAGKSTLMKILSGVYPHGTWDGEIYWSGSPLKASNIRDTERAGI 80 (500)
T ss_pred CEEEEeEEEEeCCeEeecceEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECCCCCHHHHHhCCE
Confidence 37899999999988899999999999999999999999999999999999987 79999998732 359
Q ss_pred EEEcccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHHh
Q 005532 164 AFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLM 243 (692)
Q Consensus 164 ~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll 243 (692)
+|++|++.+++..||.+|+....... ... ..........++.+++
T Consensus 81 ~~v~q~~~~~~~~tv~~~l~~~~~~~-------------~~~----------------------~~~~~~~~~~~~~~~l 125 (500)
T TIGR02633 81 VIIHQELTLVPELSVAENIFLGNEIT-------------LPG----------------------GRMAYNAMYLRAKNLL 125 (500)
T ss_pred EEEeeccccCCCCcHHHHHHhhcccc-------------ccc----------------------cccCHHHHHHHHHHHH
Confidence 99999998878899999985321000 000 0000112234567888
Q ss_pred hhcCCCccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHc---cCCCeEEEEecCHHHHH
Q 005532 244 PELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG---KQDVPMVIISHDRAFLD 320 (692)
Q Consensus 244 ~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~---~~~~tvI~vsHd~~~l~ 320 (692)
+.+|+.....++++.+|||||||||+|||||+.+|+||||||||+|||+.+++++.++|+ +.|.|||+||||++++.
T Consensus 126 ~~~~l~~~~~~~~~~~LSgG~~qrv~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviiitHd~~~~~ 205 (500)
T TIGR02633 126 RELQLDADNVTRPVGDYGGGQQQLVEIAKALNKQARLLILDEPSSSLTEKETEILLDIIRDLKAHGVACVYISHKLNEVK 205 (500)
T ss_pred HHcCCCCCcccCchhhCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCcHHHHH
Confidence 999996433467899999999999999999999999999999999999999999988764 46889999999999999
Q ss_pred hhcCeEEEEecceEEEeccChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchhhhHHHHHHHHHHHHhh
Q 005532 321 QLCTKIVETEMGVSRTYEGNYSQYVLEKAAWIESQYAAWEKQQREIEQTKDLINRLGAGANSGRASSAEKKLERLQEEEQ 400 (692)
Q Consensus 321 ~~~d~i~~l~~G~~~~~~G~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~l~rl~~~~~ 400 (692)
.+||+|++|++|++. +.|...++... ..+..+... .
T Consensus 206 ~~~d~i~~l~~G~i~-~~~~~~~~~~~-----------------------~~~~~~~~~----~---------------- 241 (500)
T TIGR02633 206 AVCDTICVIRDGQHV-ATKDMSTMSED-----------------------DIITMMVGR----E---------------- 241 (500)
T ss_pred HhCCEEEEEeCCeEe-eecCcccCCHH-----------------------HHHHHHhCc----c----------------
Confidence 999999999999974 33432211000 000000000 0
Q ss_pred hcccccccceeeecCC-CCCCCCceEEEEeEEEEc---CCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCC
Q 005532 401 IEKPFQRKQMKIRFPE-RGRSGRSVVTIKNLEFGY---EDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKP 476 (692)
Q Consensus 401 ~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~l~~~y---~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p 476 (692)
.... +|. ....++.+|+++|+++.| +++.+|+++||+|.+||++||+||||||||||+++|+|+++|
T Consensus 242 ~~~~---------~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p 312 (500)
T TIGR02633 242 ITSL---------YPHEPHEIGDVILEARNLTCWDVINPHRKRVDDVSFSLRRGEILGVAGLVGAGRTELVQALFGAYPG 312 (500)
T ss_pred cccc---------ccccccCCCCceEEEeCCcccccccccccccccceeEEeCCcEEEEeCCCCCCHHHHHHHHhCCCCC
Confidence 0000 000 001234589999999999 345799999999999999999999999999999999999985
Q ss_pred -CeeEEEECCccce-----------eeeecccch-hhcCCCccHHHHHHHHh----cc---cc----HHHHHHHHhhcCC
Q 005532 477 -RGGEVLLGEHNVL-----------PNYFEQNQA-EALDLDKTVLETVAEAA----ED---WR----IDDIKGLLGRCNF 532 (692)
Q Consensus 477 -~~G~i~~~~~~~~-----------~~~~~q~~~-~~l~~~~tv~e~~~~~~----~~---~~----~~~~~~~L~~~~l 532 (692)
++|+|.++|.++. .+|++|... ..+.+..|+.+|+.... .. .. ...+.++|+.+++
T Consensus 313 ~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~l~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l 392 (500)
T TIGR02633 313 KFEGNVFINGKPVDIRNPAQAIRAGIAMVPEDRKRHGIVPILGVGKNITLSVLKSFCFKMRIDAAAELQIIGSAIQRLKV 392 (500)
T ss_pred CCCeEEEECCEECCCCCHHHHHhCCCEEcCcchhhCCcCCCCCHHHHhcchhhhhhccCCcCCHHHHHHHHHHHHHhcCc
Confidence 8999999886541 356666532 24667789999986521 00 01 2347789999999
Q ss_pred CcccccccCCCCCHHHHHHHHHHHHhccCCcEEEEeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhccE
Q 005532 533 KADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNR 609 (692)
Q Consensus 533 ~~~~~~~~~~~LSgGqkqrv~LAral~~~p~lLlLDEPTn~LD~~~~~~l~~~l~~~---~~tviivSHd~~~l~~~~d~ 609 (692)
.....++++.+|||||||||+|||||+.+|+||||||||++||+.+++.+.+.|.++ +.|||+||||++++.++||+
T Consensus 393 ~~~~~~~~~~~LSgGqkqrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviivsHd~~~~~~~~d~ 472 (500)
T TIGR02633 393 KTASPFLPIGRLSGGNQQKAVLAKMLLTNPRVLILDEPTRGVDVGAKYEIYKLINQLAQEGVAIIVVSSELAEVLGLSDR 472 (500)
T ss_pred cCCCccCccccCCHHHHHHHHHHHHHhhCCCEEEEcCCCCCcCHhHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCE
Confidence 544578999999999999999999999999999999999999999999999888754 56999999999999999999
Q ss_pred EEEEECCEEEE
Q 005532 610 VVEVKGSNLQD 620 (692)
Q Consensus 610 i~~l~~g~l~~ 620 (692)
+++|++|++..
T Consensus 473 v~~l~~G~i~~ 483 (500)
T TIGR02633 473 VLVIGEGKLKG 483 (500)
T ss_pred EEEEECCEEEE
Confidence 99999999874
No 17
>PRK11288 araG L-arabinose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-79 Score=695.25 Aligned_cols=441 Identities=22% Similarity=0.336 Sum_probs=347.7
Q ss_pred CcEEEEeEEEEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC-----------ceEE
Q 005532 96 SGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN-----------MKIA 164 (692)
Q Consensus 96 ~~l~i~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~-----------~~i~ 164 (692)
++|+++|++++|+++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.+ ..|+
T Consensus 3 ~~l~~~~l~~~~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~~i~ 82 (501)
T PRK11288 3 PYLSFDGIGKTFPGVKALDDISFDCRAGQVHALMGENGAGKSTLLKILSGNYQPDAGSILIDGQEMRFASTTAALAAGVA 82 (501)
T ss_pred ceEEEeeeEEEECCEEEEeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCCHHHHHhCCEE
Confidence 36999999999998889999999999999999999999999999999999999999999998632 2599
Q ss_pred EEcccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHHhh
Q 005532 165 FLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMP 244 (692)
Q Consensus 165 ~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~ 244 (692)
|++|++.+++..||.+|+....... . ....+.+....++.++++
T Consensus 83 ~v~q~~~~~~~~tv~~~l~~~~~~~-------------~-----------------------~~~~~~~~~~~~~~~~l~ 126 (501)
T PRK11288 83 IIYQELHLVPEMTVAENLYLGQLPH-------------K-----------------------GGIVNRRLLNYEAREQLE 126 (501)
T ss_pred EEEechhccCCCCHHHHHHhccccc-------------c-----------------------cCCCCHHHHHHHHHHHHH
Confidence 9999998888889999985321000 0 000011223456778899
Q ss_pred hcCCCccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHc---cCCCeEEEEecCHHHHHh
Q 005532 245 ELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG---KQDVPMVIISHDRAFLDQ 321 (692)
Q Consensus 245 ~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~---~~~~tvI~vsHd~~~l~~ 321 (692)
.+|+. ...++++.+|||||||||+|||||+.+|+||||||||++||+.+++++.++|+ +.|.|||+||||++++..
T Consensus 127 ~~~l~-~~~~~~~~~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiiitHd~~~~~~ 205 (501)
T PRK11288 127 HLGVD-IDPDTPLKYLSIGQRQMVEIAKALARNARVIAFDEPTSSLSAREIEQLFRVIRELRAEGRVILYVSHRMEEIFA 205 (501)
T ss_pred HcCCC-CCcCCchhhCCHHHHHHHHHHHHHHhCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHH
Confidence 99996 45688999999999999999999999999999999999999999999998775 358999999999999999
Q ss_pred hcCeEEEEecceEEEeccChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchhhhHHHHHHHHHHHHhhh
Q 005532 322 LCTKIVETEMGVSRTYEGNYSQYVLEKAAWIESQYAAWEKQQREIEQTKDLINRLGAGANSGRASSAEKKLERLQEEEQI 401 (692)
Q Consensus 322 ~~d~i~~l~~G~~~~~~G~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~l~rl~~~~~~ 401 (692)
+||+|++|++|++.. .+ ..+..... ......+.... .
T Consensus 206 ~~d~i~~l~~G~i~~-~~--~~~~~~~~--------------------~~~~~~~~~~~--------------------~ 242 (501)
T PRK11288 206 LCDAITVFKDGRYVA-TF--DDMAQVDR--------------------DQLVQAMVGRE--------------------I 242 (501)
T ss_pred hCCEEEEEECCEEEe-ec--CccccCCH--------------------HHHHHHhcCCC--------------------c
Confidence 999999999999742 22 11100000 00000110000 0
Q ss_pred cccccccceeeecCCCCCCCCceEEEEeEEEEcCCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEE
Q 005532 402 EKPFQRKQMKIRFPERGRSGRSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEV 481 (692)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i 481 (692)
... ...++ ...+..+++++|+++. .+|+++||+|++||++||+||||||||||+++|+|+++|++|+|
T Consensus 243 ~~~-------~~~~~-~~~~~~~l~~~~~~~~----~~l~~isl~i~~Ge~~~iiG~NGsGKSTLlk~l~G~~~p~~G~i 310 (501)
T PRK11288 243 GDI-------YGYRP-RPLGEVRLRLDGLKGP----GLREPISFSVRAGEIVGLFGLVGAGRSELMKLLYGATRRTAGQV 310 (501)
T ss_pred ccc-------ccccc-cCCCCcEEEEeccccC----CcccceeEEEeCCcEEEEEcCCCCCHHHHHHHHcCCCcCCCceE
Confidence 000 00000 1123457999999842 58999999999999999999999999999999999999999999
Q ss_pred EECCccce-----------eeeecccch-hhcCCCccHHHHHHHHhc------c------ccHHHHHHHHhhcCCCcccc
Q 005532 482 LLGEHNVL-----------PNYFEQNQA-EALDLDKTVLETVAEAAE------D------WRIDDIKGLLGRCNFKADML 537 (692)
Q Consensus 482 ~~~~~~~~-----------~~~~~q~~~-~~l~~~~tv~e~~~~~~~------~------~~~~~~~~~L~~~~l~~~~~ 537 (692)
.++|.++. .+|++|+.. ..+.+..|+.+++..... . .....+.++|+.+++..+..
T Consensus 311 ~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~ 390 (501)
T PRK11288 311 YLDGKPIDIRSPRDAIRAGIMLCPEDRKAEGIIPVHSVADNINISARRHHLRAGCLINNRWEAENADRFIRSLNIKTPSR 390 (501)
T ss_pred EECCEECCCCCHHHHHhCCCEEcCcCHhhCCCcCCCCHHHHhccccchhhcccccccChHHHHHHHHHHHHhcCcccCCc
Confidence 99886542 246666532 246677899999864211 0 01235778999999954567
Q ss_pred cccCCCCCHHHHHHHHHHHHhccCCcEEEEeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhccEEEEEE
Q 005532 538 DRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVK 614 (692)
Q Consensus 538 ~~~~~~LSgGqkqrv~LAral~~~p~lLlLDEPTn~LD~~~~~~l~~~l~~~---~~tviivSHd~~~l~~~~d~i~~l~ 614 (692)
++++.+|||||||||+|||+|+.+|+||||||||+|||+.+++.|.++|.++ +.|||+||||++++..+||++++|+
T Consensus 391 ~~~~~~LSgGq~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviivsHd~~~~~~~~d~i~~l~ 470 (501)
T PRK11288 391 EQLIMNLSGGNQQKAILGRWLSEDMKVILLDEPTRGIDVGAKHEIYNVIYELAAQGVAVLFVSSDLPEVLGVADRIVVMR 470 (501)
T ss_pred cCccccCCHHHHHHHHHHHHHccCCCEEEEcCCCCCCCHhHHHHHHHHHHHHHhCCCEEEEECCCHHHHHhhCCEEEEEE
Confidence 9999999999999999999999999999999999999999999999988654 5699999999999999999999999
Q ss_pred CCEEEEecCChhHHH
Q 005532 615 GSNLQDYAGDYNYYL 629 (692)
Q Consensus 615 ~g~l~~~~g~~~~~~ 629 (692)
+|++.. .|..++|.
T Consensus 471 ~g~i~~-~~~~~~~~ 484 (501)
T PRK11288 471 EGRIAG-ELAREQAT 484 (501)
T ss_pred CCEEEE-EEccccCC
Confidence 999874 56666654
No 18
>PRK10762 D-ribose transporter ATP binding protein; Provisional
Probab=100.00 E-value=2.7e-79 Score=693.67 Aligned_cols=437 Identities=23% Similarity=0.365 Sum_probs=346.5
Q ss_pred CcEEEEeEEEEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC-----------ceEE
Q 005532 96 SGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN-----------MKIA 164 (692)
Q Consensus 96 ~~l~i~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~-----------~~i~ 164 (692)
++|+++|++++|+++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.. ..|+
T Consensus 3 ~~i~~~~l~~~~~~~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~i~ 82 (501)
T PRK10762 3 ALLQLKGIDKAFPGVKALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYTRDAGSILYLGKEVTFNGPKSSQEAGIG 82 (501)
T ss_pred ceEEEeeeEEEeCCeEEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHhCCEE
Confidence 35999999999998889999999999999999999999999999999999999999999998732 2599
Q ss_pred EEcccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHHhh
Q 005532 165 FLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMP 244 (692)
Q Consensus 165 ~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~ 244 (692)
|++|++.+++..||+||+....... .. ....+......++.++++
T Consensus 83 ~v~q~~~~~~~~tv~e~l~~~~~~~--------------~~---------------------~~~~~~~~~~~~~~~~l~ 127 (501)
T PRK10762 83 IIHQELNLIPQLTIAENIFLGREFV--------------NR---------------------FGRIDWKKMYAEADKLLA 127 (501)
T ss_pred EEEcchhccCCCcHHHHhhhccccc--------------cc---------------------cCccCHHHHHHHHHHHHH
Confidence 9999998888899999985321000 00 000001122345678899
Q ss_pred hcCCCccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHc---cCCCeEEEEecCHHHHHh
Q 005532 245 ELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG---KQDVPMVIISHDRAFLDQ 321 (692)
Q Consensus 245 ~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~---~~~~tvI~vsHd~~~l~~ 321 (692)
.+|+. +..++++.+|||||||||+|||||+.+|+||||||||++||+.++.++.++|+ +.+.|||+||||++++..
T Consensus 128 ~~~l~-~~~~~~~~~LSgG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvii~sHd~~~~~~ 206 (501)
T PRK10762 128 RLNLR-FSSDKLVGELSIGEQQMVEIAKVLSFESKVIIMDEPTDALTDTETESLFRVIRELKSQGRGIVYISHRLKEIFE 206 (501)
T ss_pred HcCCC-CCccCchhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence 99996 46789999999999999999999999999999999999999999999987764 358899999999999999
Q ss_pred hcCeEEEEecceEEEeccChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchhhhHHHHHHHHHHHHhhh
Q 005532 322 LCTKIVETEMGVSRTYEGNYSQYVLEKAAWIESQYAAWEKQQREIEQTKDLINRLGAGANSGRASSAEKKLERLQEEEQI 401 (692)
Q Consensus 322 ~~d~i~~l~~G~~~~~~G~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~l~rl~~~~~~ 401 (692)
+||+|+++++|++. ..|...+.... ..++..... . +. .
T Consensus 207 ~~d~i~~l~~G~i~-~~~~~~~~~~~-----------------------~~~~~~~~~----~----------~~----~ 244 (501)
T PRK10762 207 ICDDVTVFRDGQFI-AEREVADLTED-----------------------SLIEMMVGR----K----------LE----D 244 (501)
T ss_pred hCCEEEEEeCCEEE-EecCcCcCCHH-----------------------HHHHHhcCC----C----------cc----c
Confidence 99999999999974 44543221100 001110000 0 00 0
Q ss_pred cccccccceeeecCCCCCCCCceEEEEeEEEEcCCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEE
Q 005532 402 EKPFQRKQMKIRFPERGRSGRSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEV 481 (692)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i 481 (692)
..+ . .+. .++.++|+++|+++ .+|+++||+|.+||++||+||||||||||+++|+|+++|++|+|
T Consensus 245 ~~~------~--~~~--~~~~~~l~~~~l~~-----~~l~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~G~~~p~~G~I 309 (501)
T PRK10762 245 QYP------R--LDK--APGEVRLKVDNLSG-----PGVNDVSFTLRKGEILGVSGLMGAGRTELMKVLYGALPRTSGYV 309 (501)
T ss_pred ccc------c--ccc--CCCCcEEEEeCccc-----CCcccceEEEcCCcEEEEecCCCCCHHHHHHHHhCCCCCCceEE
Confidence 000 0 010 12345799999985 36999999999999999999999999999999999999999999
Q ss_pred EECCccc-----------eeeeecccch-hhcCCCccHHHHHHHHhc----c----c----cHHHHHHHHhhcCCCcccc
Q 005532 482 LLGEHNV-----------LPNYFEQNQA-EALDLDKTVLETVAEAAE----D----W----RIDDIKGLLGRCNFKADML 537 (692)
Q Consensus 482 ~~~~~~~-----------~~~~~~q~~~-~~l~~~~tv~e~~~~~~~----~----~----~~~~~~~~L~~~~l~~~~~ 537 (692)
.++|.++ ..+|++|+.. ..+.+..|+.+++..... . . ....+.++++.+++.....
T Consensus 310 ~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~ 389 (501)
T PRK10762 310 TLDGHEVVTRSPQDGLANGIVYISEDRKRDGLVLGMSVKENMSLTALRYFSRAGGSLKHADEQQAVSDFIRLFNIKTPSM 389 (501)
T ss_pred EECCEECCCCCHHHHHHCCCEEecCccccCCCcCCCcHHHHhhhhhhhhhcccccccCHHHHHHHHHHHHHhcCCCCCCc
Confidence 9988554 1467777532 245677899999864210 0 0 1234778999999953457
Q ss_pred cccCCCCCHHHHHHHHHHHHhccCCcEEEEeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhccEEEEEE
Q 005532 538 DRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVK 614 (692)
Q Consensus 538 ~~~~~~LSgGqkqrv~LAral~~~p~lLlLDEPTn~LD~~~~~~l~~~l~~~---~~tviivSHd~~~l~~~~d~i~~l~ 614 (692)
++++.+|||||||||+|||||+.+|+||||||||++||+.+++.+.+.|+++ +.|||+||||++++..+||+|++|+
T Consensus 390 ~~~~~~LSgGekqrv~lA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tviivtHd~~~~~~~~d~v~~l~ 469 (501)
T PRK10762 390 EQAIGLLSGGNQQKVAIARGLMTRPKVLILDEPTRGVDVGAKKEIYQLINQFKAEGLSIILVSSEMPEVLGMSDRILVMH 469 (501)
T ss_pred cCchhhCCHHHHHHHHHHHHHhhCCCEEEEcCCCCCCCHhHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHhhCCEEEEEE
Confidence 9999999999999999999999999999999999999999999999999876 3599999999999999999999999
Q ss_pred CCEEEEecCChh
Q 005532 615 GSNLQDYAGDYN 626 (692)
Q Consensus 615 ~g~l~~~~g~~~ 626 (692)
+|++.. .|+.+
T Consensus 470 ~G~i~~-~~~~~ 480 (501)
T PRK10762 470 EGRISG-EFTRE 480 (501)
T ss_pred CCEEEE-Eeccc
Confidence 999873 34433
No 19
>KOG0062 consensus ATPase component of ABC transporters with duplicated ATPase domains/Translation elongation factor EF-3b [Amino acid transport and metabolism; Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=1.4e-79 Score=652.68 Aligned_cols=487 Identities=32% Similarity=0.505 Sum_probs=392.1
Q ss_pred CCcEEEEeEEEEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCCceEEEEcccCccCC
Q 005532 95 SSGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSNMKIAFLSQEFEVSM 174 (692)
Q Consensus 95 ~~~l~i~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~~~i~~v~Q~~~~~~ 174 (692)
...|.+.+++..||++.+|.+.++++..|.++||||+||+|||||||+|+. |.|... -++|+..-
T Consensus 78 ~~Di~~~~fdLa~G~k~LL~~a~L~L~~GrRYGLvGrNG~GKsTLLRaia~------~~v~~f-------~veqE~~g-- 142 (582)
T KOG0062|consen 78 SKDIHIDNFDLAYGGKILLNKANLTLSRGRRYGLVGRNGIGKSTLLRAIAN------GQVSGF-------HVEQEVRG-- 142 (582)
T ss_pred ccceeeeeeeeeecchhhhcCCceeeecccccceeCCCCCcHHHHHHHHHh------cCcCcc-------Cchhheec--
Confidence 345999999999999999999999999999999999999999999999986 444322 12222100
Q ss_pred CCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcc-cHHHHHHHHhhhcCCCcccc
Q 005532 175 SRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLD-TLDAKVSKLMPELGFTADDG 253 (692)
Q Consensus 175 ~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~ll~~lgl~~~~~ 253 (692)
..| +.+.... + .|..... ++.+ ...+... .+++...++|..+||+++..
T Consensus 143 ~~t--~~~~~~l-----------------~---~D~~~~d-fl~~-------e~~l~~~~~l~ei~~~~L~glGFt~emq 192 (582)
T KOG0062|consen 143 DDT--EALQSVL-----------------E---SDTERLD-FLAE-------EKELLAGLTLEEIYDKILAGLGFTPEMQ 192 (582)
T ss_pred cch--HHHhhhh-----------------h---ccHHHHH-HHHh-------hhhhhccchHHHHHHHHHHhCCCCHHHH
Confidence 000 0000000 0 0000000 0000 0001111 23333444899999999999
Q ss_pred ccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHccCCCeEEEEecCHHHHHhhcCeEEEEecce
Q 005532 254 DRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGKQDVPMVIISHDRAFLDQLCTKIVETEMGV 333 (692)
Q Consensus 254 ~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~~~~tvI~vsHd~~~l~~~~d~i~~l~~G~ 333 (692)
.+|+.+||||||+|++|||||..+||||||||||||||..++.||.++|+.++.|+|+||||+.|++.+|+.|+++++-+
T Consensus 193 ~~pt~slSGGWrMrlaLARAlf~~pDlLLLDEPTNhLDv~av~WLe~yL~t~~~T~liVSHDr~FLn~V~tdIIH~~~~k 272 (582)
T KOG0062|consen 193 LQPTKSLSGGWRMRLALARALFAKPDLLLLDEPTNHLDVVAVAWLENYLQTWKITSLIVSHDRNFLNTVCTDIIHLENLK 272 (582)
T ss_pred hccccccCcchhhHHHHHHHHhcCCCEEeecCCcccchhHHHHHHHHHHhhCCceEEEEeccHHHHHHHHHHHHHHhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeccChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC-cchhhhHHHHHHHHHHHHhhhcccccccceee
Q 005532 334 SRTYEGNYSQYVLEKAAWIESQYAAWEKQQREIEQTKDLINRLGAGA-NSGRASSAEKKLERLQEEEQIEKPFQRKQMKI 412 (692)
Q Consensus 334 ~~~~~G~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~-~~~~~~~~~~~l~rl~~~~~~~~~~~~~~~~~ 412 (692)
+.+|.|||+.|+..+.+....+...|+.+.+..+..+..+++++-.+ .+..++++.+.++++- ...++.......+
T Consensus 273 L~~YkGN~~~Fvk~k~E~~~n~qrefe~q~~~R~h~q~fid~FrYna~ra~svqSRIk~L~kl~---~lk~~~~~~~~~~ 349 (582)
T KOG0062|consen 273 LDYYKGNYSQFVKTKPEAKKNQQREFEVQMKYRAHLQVFIDKFRYNAARASSVQSRIKMLGKLP---ALKSTLIEVLIGF 349 (582)
T ss_pred hhhhcCcHHHHHHhhHHhhhhhhhhcchHHHHHHHHHHHHHHhccCcccchhHHHHHHHhccCC---CCCccceecccce
Confidence 99999999999999999888888889888777777888888876422 2233444444444322 2223333444556
Q ss_pred ecCCC-CCCCCceEEEEeEEEEcCCe--ecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccce
Q 005532 413 RFPER-GRSGRSVVTIKNLEFGYEDR--LLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL 489 (692)
Q Consensus 413 ~~~~~-~~~~~~~l~~~~l~~~y~~~--~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~~ 489 (692)
.||+. .....+.|++.+|+|.|+.. +++.++++.++.-+++++||+||+||||+++++.|.+.|..|.+.+.+ .++
T Consensus 350 ~fP~~~e~~~~p~l~i~~V~f~y~p~~y~~~~~~~~d~e~~sRi~~vg~ng~gkst~lKi~~~~l~~~rgi~~~~~-r~r 428 (582)
T KOG0062|consen 350 LFPTEGEVLSPPNLRISYVAFEYTPSEYQWRKQLGLDRESDSRISRVGENGDGKSTLLKILKGDLTPTRGIVGRHP-RLR 428 (582)
T ss_pred ecCCCCCcCCCCeeEEEeeeccCCCcchhhhhccCCccchhhhhheeccCchhHHHHHHHHhccCCcccceeeecc-cce
Confidence 67773 45677899999999999744 599999999999999999999999999999999999999999998875 567
Q ss_pred eeeecccchhhcCCCccHHHHHHHHhccccHHHHHHHHhhcCCCcccccccCCCCCHHHHHHHHHHHHhccCCcEEEEeC
Q 005532 490 PNYFEQNQAEALDLDKTVLETVAEAAEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDE 569 (692)
Q Consensus 490 ~~~~~q~~~~~l~~~~tv~e~~~~~~~~~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~LAral~~~p~lLlLDE 569 (692)
.+|+.|..-..++...+..+.+.........++++.-|+.||++++....++.+||||||.||+||.+.+.+|++|+|||
T Consensus 429 i~~f~Qhhvd~l~~~v~~vd~~~~~~pG~~~ee~r~hl~~~Gl~g~la~~si~~LSGGQKsrvafA~~~~~~PhlLVLDE 508 (582)
T KOG0062|consen 429 IKYFAQHHVDFLDKNVNAVDFMEKSFPGKTEEEIRRHLGSFGLSGELALQSIASLSGGQKSRVAFAACTWNNPHLLVLDE 508 (582)
T ss_pred ecchhHhhhhHHHHHhHHHHHHHHhCCCCCHHHHHHHHHhcCCCchhhhccccccCCcchhHHHHHHHhcCCCcEEEecC
Confidence 88998875555544555555555544444677899999999999998888999999999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHhcCceEEEEecCHHHHHhhccEEEEEECCEEEEecCChhHHHH
Q 005532 570 PTNHLDIPSKEMLEEAISEYKGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYYLE 630 (692)
Q Consensus 570 PTn~LD~~~~~~l~~~l~~~~~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~~~~~ 630 (692)
||||||.++...|.++|+.|.|.||+||||.+|+..+|+.+|+.++|++..+.|+.++|..
T Consensus 509 PTNhLD~dsl~AL~~Al~~F~GGVv~VSHd~~fi~~~c~E~Wvve~g~vt~ieg~~~~yKk 569 (582)
T KOG0062|consen 509 PTNHLDRDSLGALAKALKNFNGGVVLVSHDEEFISSLCKELWVVEDGKVTPIEGGIDKYKK 569 (582)
T ss_pred CCccccHHHHHHHHHHHHhcCCcEEEEECcHHHHhhcCceeEEEcCCcEEeeeccHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999988854
No 20
>PRK10938 putative molybdenum transport ATP-binding protein ModF; Provisional
Probab=100.00 E-value=1.2e-78 Score=686.94 Aligned_cols=435 Identities=22% Similarity=0.272 Sum_probs=334.7
Q ss_pred cEEEEeEEEEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC----------ceEEEE
Q 005532 97 GVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN----------MKIAFL 166 (692)
Q Consensus 97 ~l~i~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~----------~~i~~v 166 (692)
+|+++|++++|+++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.. ..++|+
T Consensus 3 ~l~~~~l~~~~~~~~il~~vsl~i~~Ge~~~liG~nGsGKSTLl~~l~G~~~p~~G~i~~~~~~~~~~~~~~~~~~i~~~ 82 (490)
T PRK10938 3 SLQISQGTFRLSDTKTLQLPSLTLNAGDSWAFVGANGSGKSALARALAGELPLLSGERQSQFSHITRLSFEQLQKLVSDE 82 (490)
T ss_pred eEEEEeEEEEcCCeeecccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCceEEECCcccccCCHHHHHHHhcee
Confidence 5999999999998889999999999999999999999999999999999999999999987632 138999
Q ss_pred cccCccCC--------CCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHH
Q 005532 167 SQEFEVSM--------SRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAK 238 (692)
Q Consensus 167 ~Q~~~~~~--------~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (692)
+|++.... ..|+.+++... ....++
T Consensus 83 ~q~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------------------------------~~~~~~ 115 (490)
T PRK10938 83 WQRNNTDMLSPGEDDTGRTTAEIIQDE-----------------------------------------------VKDPAR 115 (490)
T ss_pred ccCcchhhcccchhhccccHHHhcccc-----------------------------------------------hhHHHH
Confidence 99864311 23444443100 011345
Q ss_pred HHHHhhhcCCCccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc---CCCeEEEEecC
Q 005532 239 VSKLMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK---QDVPMVIISHD 315 (692)
Q Consensus 239 i~~ll~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~---~~~tvI~vsHd 315 (692)
+.++++.+|+. +..++++.+|||||||||+|||||+.+|++|||||||++||+.+++++.++|++ .|.|||+||||
T Consensus 116 ~~~~l~~~~l~-~~~~~~~~~LSgG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tvii~tH~ 194 (490)
T PRK10938 116 CEQLAQQFGIT-ALLDRRFKYLSTGETRKTLLCQALMSEPDLLILDEPFDGLDVASRQQLAELLASLHQSGITLVLVLNR 194 (490)
T ss_pred HHHHHHHcCCH-hhhhCCcccCCHHHHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCeEEEEeCC
Confidence 66788888986 567899999999999999999999999999999999999999999999988753 47899999999
Q ss_pred HHHHHhhcCeEEEEecceEEEeccChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchhhhHHHHHHHHH
Q 005532 316 RAFLDQLCTKIVETEMGVSRTYEGNYSQYVLEKAAWIESQYAAWEKQQREIEQTKDLINRLGAGANSGRASSAEKKLERL 395 (692)
Q Consensus 316 ~~~l~~~~d~i~~l~~G~~~~~~G~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~l~rl 395 (692)
++++.++||+|++|++|++. +.|++.++.... .+.++... +++
T Consensus 195 ~~~~~~~~d~v~~l~~G~i~-~~~~~~~~~~~~-----------------------~~~~~~~~-------------~~~ 237 (490)
T PRK10938 195 FDEIPDFVQFAGVLADCTLA-ETGEREEILQQA-----------------------LVAQLAHS-------------EQL 237 (490)
T ss_pred HHHHHhhCCEEEEEECCEEE-EeCCHHHHhcch-----------------------hhhhhhhh-------------hcc
Confidence 99999999999999999984 557654432110 00000000 000
Q ss_pred HHHhhhcccccccceeeecCCCCCCCCceEEEEeEEEEcCCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCC
Q 005532 396 QEEEQIEKPFQRKQMKIRFPERGRSGRSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEK 475 (692)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~ 475 (692)
.. ...+..... ..+.......++|+++|+++.|+++.+|+++||+|++||++||+||||||||||+++|+|+.+
T Consensus 238 ~~---~~~~~~~~~---~~~~~~~~~~~~l~~~~l~~~~~~~~il~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~G~~~ 311 (490)
T PRK10938 238 EG---VQLPEPDEP---SARHALPANEPRIVLNNGVVSYNDRPILHNLSWQVNPGEHWQIVGPNGAGKSTLLSLITGDHP 311 (490)
T ss_pred Cc---cccCccccc---ccccccCCCCceEEEeceEEEECCeeEEeeceEEEcCCCEEEEECCCCCCHHHHHHHHcCCCC
Confidence 00 000000000 000001124568999999999988889999999999999999999999999999999999887
Q ss_pred C-CeeEEEECCccc-----------eeeeecccchhhcCCCccHHHHHHHHh----c---ccc---HHHHHHHHhhcCCC
Q 005532 476 P-RGGEVLLGEHNV-----------LPNYFEQNQAEALDLDKTVLETVAEAA----E---DWR---IDDIKGLLGRCNFK 533 (692)
Q Consensus 476 p-~~G~i~~~~~~~-----------~~~~~~q~~~~~l~~~~tv~e~~~~~~----~---~~~---~~~~~~~L~~~~l~ 533 (692)
| ++|+|.++|.++ ..+|+.|..........++.+++.... . ... ...+.++++.+++.
T Consensus 312 ~~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~ 391 (490)
T PRK10938 312 QGYSNDLTLFGRRRGSGETIWDIKKHIGYVSSSLHLDYRVSTSVRNVILSGFFDSIGIYQAVSDRQQKLAQQWLDILGID 391 (490)
T ss_pred cccCCeEEEecccCCCCCCHHHHHhhceEECHHHHhhcccCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHcCCc
Confidence 5 699999987543 134666543211112345665554221 0 011 23577899999996
Q ss_pred cccccccCCCCCHHHHHHHHHHHHhccCCcEEEEeCCCCCCCHHHHHHHHHHHHhc---Cc-eEEEEecCHHHHHh-hcc
Q 005532 534 ADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY---KG-TVITVSHDRYFVKQ-IVN 608 (692)
Q Consensus 534 ~~~~~~~~~~LSgGqkqrv~LAral~~~p~lLlLDEPTn~LD~~~~~~l~~~l~~~---~~-tviivSHd~~~l~~-~~d 608 (692)
....++++.+|||||||||+|||||+.+|+||||||||+|||+.+++.+.++|.++ ++ |||+||||++++.. +||
T Consensus 392 ~~~~~~~~~~LSgGq~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~L~~l~~~~~~tviivsHd~~~~~~~~~d 471 (490)
T PRK10938 392 KRTADAPFHSLSWGQQRLALIVRALVKHPTLLILDEPLQGLDPLNRQLVRRFVDVLISEGETQLLFVSHHAEDAPACITH 471 (490)
T ss_pred hhhccCchhhCCHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHhcCCcEEEEEecchhhhhhhhhe
Confidence 43678999999999999999999999999999999999999999999999999875 23 69999999999987 599
Q ss_pred EEEEEECCEEEEec
Q 005532 609 RVVEVKGSNLQDYA 622 (692)
Q Consensus 609 ~i~~l~~g~l~~~~ 622 (692)
++++|++|++..+.
T Consensus 472 ~v~~l~~G~i~~~~ 485 (490)
T PRK10938 472 RLEFVPDGDIYRYV 485 (490)
T ss_pred eEEEecCCceEEee
Confidence 99999999988653
No 21
>PRK10982 galactose/methyl galaxtoside transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.1e-78 Score=683.58 Aligned_cols=437 Identities=20% Similarity=0.315 Sum_probs=340.4
Q ss_pred EEeEEEEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC-----------ceEEEEcc
Q 005532 100 LENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN-----------MKIAFLSQ 168 (692)
Q Consensus 100 i~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~-----------~~i~~v~Q 168 (692)
++|++++|+++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.+ ..++|++|
T Consensus 1 ~~nl~~~~~~~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q 80 (491)
T PRK10982 1 MSNISKSFPGVKALDNVNLKVRPHSIHALMGENGAGKSTLLKCLFGIYQKDSGSILFQGKEIDFKSSKEALENGISMVHQ 80 (491)
T ss_pred CCceEEEeCCEEeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCceEEEECCEECCCCCHHHHHhCCEEEEec
Confidence 3689999998889999999999999999999999999999999999999999999998742 35999999
Q ss_pred cCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHHhhhcCC
Q 005532 169 EFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGF 248 (692)
Q Consensus 169 ~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl 248 (692)
++.+++..||.+|+...... .... ..+.....+++.++++.+|+
T Consensus 81 ~~~~~~~~tv~~~l~~~~~~--------------~~~~----------------------~~~~~~~~~~~~~~l~~~~l 124 (491)
T PRK10982 81 ELNLVLQRSVMDNMWLGRYP--------------TKGM----------------------FVDQDKMYRDTKAIFDELDI 124 (491)
T ss_pred ccccccCCCHHHHhhccccc--------------cccc----------------------ccCHHHHHHHHHHHHHHcCC
Confidence 99887889999998532100 0000 00011123456678888998
Q ss_pred CccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHc---cCCCeEEEEecCHHHHHhhcCe
Q 005532 249 TADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG---KQDVPMVIISHDRAFLDQLCTK 325 (692)
Q Consensus 249 ~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~---~~~~tvI~vsHd~~~l~~~~d~ 325 (692)
. ...++++.+|||||||||+|||||+.+|+||||||||++||+.+++++.++|+ +.+.|||+||||++++..+||+
T Consensus 125 ~-~~~~~~~~~LSgGq~qrv~lA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvii~tH~~~~~~~~~d~ 203 (491)
T PRK10982 125 D-IDPRAKVATLSVSQMQMIEIAKAFSYNAKIVIMDEPTSSLTEKEVNHLFTIIRKLKERGCGIVYISHKMEEIFQLCDE 203 (491)
T ss_pred C-CCccCchhhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCE
Confidence 6 46788899999999999999999999999999999999999999999988774 3589999999999999999999
Q ss_pred EEEEecceEEEeccChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchhhhHHHHHHHHHHHHhhhcccc
Q 005532 326 IVETEMGVSRTYEGNYSQYVLEKAAWIESQYAAWEKQQREIEQTKDLINRLGAGANSGRASSAEKKLERLQEEEQIEKPF 405 (692)
Q Consensus 326 i~~l~~G~~~~~~G~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~l~rl~~~~~~~~~~ 405 (692)
|+++++|++. ..|...+... .+.++.+.+. . ....
T Consensus 204 i~~l~~G~i~-~~~~~~~~~~-----------------------~~~~~~~~~~-~-------------------~~~~- 238 (491)
T PRK10982 204 ITILRDGQWI-ATQPLAGLTM-----------------------DKIIAMMVGR-S-------------------LTQR- 238 (491)
T ss_pred EEEEECCEEE-eecChhhCCH-----------------------HHHHHHHhCC-C-------------------cccc-
Confidence 9999999974 4444222100 0001111000 0 0000
Q ss_pred cccceeeecCC-CCCCCCceEEEEeEEEEcCCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEEC
Q 005532 406 QRKQMKIRFPE-RGRSGRSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLG 484 (692)
Q Consensus 406 ~~~~~~~~~~~-~~~~~~~~l~~~~l~~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~ 484 (692)
++. ...+.+++|+++|+++.| +.+|+++||+|++||++||+|+||||||||+++|+|+.+|++|+|.++
T Consensus 239 --------~~~~~~~~~~~~i~~~~l~~~~--~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~ 308 (491)
T PRK10982 239 --------FPDKENKPGEVILEVRNLTSLR--QPSIRDVSFDLHKGEILGIAGLVGAKRTDIVETLFGIREKSAGTITLH 308 (491)
T ss_pred --------cccccCCCCCcEEEEeCccccc--CcccceeeEEEeCCcEEEEecCCCCCHHHHHHHHcCCCcCCccEEEEC
Confidence 000 011234579999999985 469999999999999999999999999999999999999999999998
Q ss_pred Cccce-----------eeeecccch-hhcCCCccHHHH-----HHHHhcc---cc----HHHHHHHHhhcCCCccccccc
Q 005532 485 EHNVL-----------PNYFEQNQA-EALDLDKTVLET-----VAEAAED---WR----IDDIKGLLGRCNFKADMLDRK 540 (692)
Q Consensus 485 ~~~~~-----------~~~~~q~~~-~~l~~~~tv~e~-----~~~~~~~---~~----~~~~~~~L~~~~l~~~~~~~~ 540 (692)
|.++. .+|++|... ..+.++.++.++ +...... .. ...+..+++.+++.....+++
T Consensus 309 g~~i~~~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~ 388 (491)
T PRK10982 309 GKKINNHNANEAINHGFALVTEERRSTGIYAYLDIGFNSLISNIRNYKNKVGLLDNSRMKSDTQWVIDSMRVKTPGHRTQ 388 (491)
T ss_pred CEECCCCCHHHHHHCCCEEcCCchhhCCcccCCcHHHheehhhhhhhcccccccCcHHHHHHHHHHHHhcCccCCCcccc
Confidence 86542 345655432 234456666555 3221110 11 234678899999954457999
Q ss_pred CCCCCHHHHHHHHHHHHhccCCcEEEEeCCCCCCCHHHHHHHHHHHHh---cCceEEEEecCHHHHHhhccEEEEEECCE
Q 005532 541 VSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISE---YKGTVITVSHDRYFVKQIVNRVVEVKGSN 617 (692)
Q Consensus 541 ~~~LSgGqkqrv~LAral~~~p~lLlLDEPTn~LD~~~~~~l~~~l~~---~~~tviivSHd~~~l~~~~d~i~~l~~g~ 617 (692)
+.+|||||||||+|||+|+.+|+||||||||+|||+.+++.+.+.|.+ .++|||+||||++++..+|||+++|++|+
T Consensus 389 ~~~LSgGq~qrv~la~al~~~p~illLDEPt~gLD~~~~~~~~~~l~~l~~~~~tvi~vsHd~~~~~~~~d~v~~l~~g~ 468 (491)
T PRK10982 389 IGSLSGGNQQKVIIGRWLLTQPEILMLDEPTRGIDVGAKFEIYQLIAELAKKDKGIIIISSEMPELLGITDRILVMSNGL 468 (491)
T ss_pred cccCCcHHHHHHHHHHHHhcCCCEEEEcCCCcccChhHHHHHHHHHHHHHHCCCEEEEECCChHHHHhhCCEEEEEECCE
Confidence 999999999999999999999999999999999999999999998854 46799999999999999999999999999
Q ss_pred EEEecCChhHHH
Q 005532 618 LQDYAGDYNYYL 629 (692)
Q Consensus 618 l~~~~g~~~~~~ 629 (692)
+..+ +....|.
T Consensus 469 i~~~-~~~~~~~ 479 (491)
T PRK10982 469 VAGI-VDTKTTT 479 (491)
T ss_pred EEEE-EccccCC
Confidence 9843 3334443
No 22
>KOG0066 consensus eIF2-interacting protein ABC50 (ABC superfamily) [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=2.1e-74 Score=597.79 Aligned_cols=517 Identities=32% Similarity=0.560 Sum_probs=411.8
Q ss_pred CcEEEEeEEEEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCCceEEEEcccCccCCC
Q 005532 96 SGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSNMKIAFLSQEFEVSMS 175 (692)
Q Consensus 96 ~~l~i~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~~~i~~v~Q~~~~~~~ 175 (692)
..|.|+|.+.+-.++.+|.|.||.|-.|.++|||||||-||||||+-|+.-- ..+. +++.+-||.|+... .+
T Consensus 263 ~DIKiEnF~ISA~Gk~LFvnA~L~Iv~GRRYGLVGPNG~GKTTLLkHIa~Ra------laIP-pnIDvLlCEQEvva-d~ 334 (807)
T KOG0066|consen 263 MDIKIENFDISAQGKLLFVNASLTIVYGRRYGLVGPNGMGKTTLLKHIAARA------LAIP-PNIDVLLCEQEVVA-DS 334 (807)
T ss_pred ccceeeeeeeecccceeeeccceEEEecceecccCCCCCchHHHHHHHHhhh------ccCC-CCCceEeeeeeeee-cC
Confidence 4599999999998999999999999999999999999999999999997531 1111 35678899998654 34
Q ss_pred CCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHHhhhcCCCcccccc
Q 005532 176 RTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFTADDGDR 255 (692)
Q Consensus 176 ~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl~~~~~~~ 255 (692)
.|..+.++.+-.......+...++...++.- +....+++-+-+ .....++++..+.+++.+|..|||+.+.-++
T Consensus 335 t~Ai~tvl~aD~kRl~lLeee~~L~~q~e~G--d~taaErl~~v~----~ELraiGA~sAEarARRILAGLGFskEMQ~r 408 (807)
T KOG0066|consen 335 TSAIDTVLKADKKRLALLEEEAKLMSQIEEG--DTTAAERLKEVA----DELRAIGADSAEARARRILAGLGFSKEMQER 408 (807)
T ss_pred cHHHHHHHHhhHHHHHHHHHHHHHHHHHHcC--chHHHHHHHHHH----HHHHHhccccchhHHHHHHhhcCCChhHhcC
Confidence 4445555433222333333333333333321 111222222222 2334578889999999999999999999999
Q ss_pred ccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHccCCCeEEEEecCHHHHHhhcCeEEEEecceEE
Q 005532 256 LVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGKQDVPMVIISHDRAFLDQLCTKIVETEMGVSR 335 (692)
Q Consensus 256 ~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~~~~tvI~vsHd~~~l~~~~d~i~~l~~G~~~ 335 (692)
|...+|||||+||+|||||+..|.+|.|||||||||....-||.++|+.+.+|++|||||-.|++.+|+.|+++++.++.
T Consensus 409 Pt~kFSGGWRMRvSLARALflEPTLLMLDEPTNHLDLNAVIWLdNYLQgWkKTLLIVSHDQgFLD~VCtdIIHLD~qkLh 488 (807)
T KOG0066|consen 409 PTTKFSGGWRMRVSLARALFLEPTLLMLDEPTNHLDLNAVIWLDNYLQGWKKTLLIVSHDQGFLDSVCTDIIHLDNQKLH 488 (807)
T ss_pred CccccCCceeeehhHHHHHhcCceeeeecCCccccccceeeehhhHHhhhhheeEEEecccchHHHHHHHHhhhhhhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeccChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchhhhHH-HHHHHHHHHH---------hhhcccc
Q 005532 336 TYEGNYSQYVLEKAAWIESQYAAWEKQQREIEQTKDLINRLGAGANSGRASSA-EKKLERLQEE---------EQIEKPF 405 (692)
Q Consensus 336 ~~~G~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~-~~~l~rl~~~---------~~~~~~~ 405 (692)
+|.|||..|-....+........|+++++.++.+.. .+.++.++... ...+.|-+.. .....|+
T Consensus 489 yYrGNY~~FKKmY~Qk~~e~~K~yekQeK~LkelKa------~GkS~KqAEkq~Ke~ltrKq~K~~~Knq~dded~gapE 562 (807)
T KOG0066|consen 489 YYRGNYTLFKKMYAQKMQEHEKNYEKQEKQLKELKA------EGKSAKQAEKQVKEQLTRKQKKGGKKNQNDDEDAGAPE 562 (807)
T ss_pred hhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh------cCcchHHHHHHHHHHHHHHHHhccccccCccccccCHH
Confidence 999999988777776666666677776665543321 11111111111 1112221110 0000111
Q ss_pred -----cccceeeecCCCCCCCCceEEEEeEEEEcC-CeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCee
Q 005532 406 -----QRKQMKIRFPERGRSGRSVVTIKNLEFGYE-DRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGG 479 (692)
Q Consensus 406 -----~~~~~~~~~~~~~~~~~~~l~~~~l~~~y~-~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G 479 (692)
..-.++|.||++.....|++-+.+|+|.|+ .+++|.+++|-|.--.+||||||||.||||||++|.|-+.|..|
T Consensus 563 LL~RpKEY~VkF~FPep~~L~PPvLGlH~VtFgy~gqkpLFkkldFGiDmdSRiaIVGPNGVGKSTlLkLL~Gkl~P~~G 642 (807)
T KOG0066|consen 563 LLQRPKEYSVKFQFPEPTKLNPPVLGLHDVTFGYPGQKPLFKKLDFGIDMDSRIAIVGPNGVGKSTLLKLLIGKLDPNDG 642 (807)
T ss_pred HHhCchheEEEEecCCCCCCCCCeeecccccccCCCCCchhhcccccccccceeEEECCCCccHHHHHHHHhcCCCCCcc
Confidence 112457889988888889999999999995 57899999999999999999999999999999999999999999
Q ss_pred EEEECCccceeeeecccchhhcCCCccHHHHHHHHhccccHHHHHHHHhhcCCCcccccccCCCCCHHHHHHHHHHHHhc
Q 005532 480 EVLLGEHNVLPNYFEQNQAEALDLDKTVLETVAEAAEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMV 559 (692)
Q Consensus 480 ~i~~~~~~~~~~~~~q~~~~~l~~~~tv~e~~~~~~~~~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~LAral~ 559 (692)
+..-+ +.+.+++|.|+..+.+....|..+++...... ..++++..|+.||+..+...-.+..|||||+.||+||-.-+
T Consensus 643 E~RKn-hrL~iG~FdQh~~E~L~~Eetp~EyLqr~FNl-pyq~ARK~LG~fGL~sHAHTikikdLSGGQKaRValaeLal 720 (807)
T KOG0066|consen 643 ELRKN-HRLRIGWFDQHANEALNGEETPVEYLQRKFNL-PYQEARKQLGTFGLASHAHTIKIKDLSGGQKARVALAELAL 720 (807)
T ss_pred hhhcc-ceeeeechhhhhHHhhccccCHHHHHHHhcCC-ChHHHHHHhhhhhhhhccceEeeeecCCcchHHHHHHHHhc
Confidence 98765 57888999998888888889999998765442 45678999999999876666788899999999999999999
Q ss_pred cCCcEEEEeCCCCCCCHHHHHHHHHHHHhcCceEEEEecCHHHHHhhccEEEEEECCEEEEecCChhHHHHHhHH
Q 005532 560 KPSTLLVLDEPTNHLDIPSKEMLEEAISEYKGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYYLEKNLD 634 (692)
Q Consensus 560 ~~p~lLlLDEPTn~LD~~~~~~l~~~l~~~~~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~~~~~~~~~ 634 (692)
..|+|||||||||+||++++..|.++|++|.|+|||||||..++...-...|++++..|.+..|.|++|...-.+
T Consensus 721 ~~PDvlILDEPTNNLDIESIDALaEAIney~GgVi~VsHDeRLi~eT~C~LwVvE~Q~i~eIdGdFeDYkkEVLd 795 (807)
T KOG0066|consen 721 GGPDVLILDEPTNNLDIESIDALAEAINEYNGGVIMVSHDERLIVETDCNLWVVENQGIDEIDGDFEDYKKEVLD 795 (807)
T ss_pred CCCCEEEecCCCCCcchhhHHHHHHHHHhccCcEEEEecccceeeecCceEEEEccCChhhccccHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999877789999999999999999999764443
No 23
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=2.3e-73 Score=662.60 Aligned_cols=538 Identities=26% Similarity=0.409 Sum_probs=370.6
Q ss_pred hhhcchhhHHHHhHHHHHHhhhccCccccccccccccCCCCCCCCCCCcEEEEeEEEEeCCee---ceeeeeEEEECCcE
Q 005532 49 VSAATVEKKSIAKAQSDVESLFSSSADEFENKKYSNKQSNTGASSISSGVKLENISKSYKGVT---VLKDVTWEVKKGEK 125 (692)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~ls~~y~~~~---vL~~vsl~i~~Ge~ 125 (692)
+....+...++..++.+...+|+..++.+..+..... . .......+.|+++||+|+|+.+| +|+|+||.|++|+.
T Consensus 304 Lgqa~p~l~~f~~a~~aa~~I~~~i~~~~~i~~~~~~-~-~~~~~~~g~ief~nV~FsYPsRpdv~Il~g~sl~i~~G~~ 381 (1228)
T KOG0055|consen 304 LGQASPHLSAFAKARAAAYRIFETIDRKPSIDPYSKG-G-RVLSSIKGEIEFRNVCFSYPSRPDVKILKGVSLKIPSGQT 381 (1228)
T ss_pred hhccccchHHHhccccchHHHHHHhcCCCCCCccccc-C-CcccccccceEEEEEEecCCCCCcchhhCCeEEEeCCCCE
Confidence 4455666678888888888888887766555554411 1 12224566799999999998875 99999999999999
Q ss_pred EEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCCc----------eEEEEcccCccCCCCCHHHHHHhhhHHHHHHHHH
Q 005532 126 VGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSNM----------KIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGK 195 (692)
Q Consensus 126 ~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~~----------~i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~ 195 (692)
++|||||||||||++++|.++|+|++|+|.++|.+. .||.|+|+|. +++.||+|||..+-.+. .
T Consensus 382 valVG~SGsGKST~i~LL~RfydP~~G~V~idG~di~~~~~~~lr~~iglV~QePv-lF~~tI~eNI~~G~~da-----t 455 (1228)
T KOG0055|consen 382 VALVGPSGSGKSTLIQLLARFYDPTSGEVLIDGEDIRNLNLKWLRSQIGLVSQEPV-LFATTIRENIRYGKPDA-----T 455 (1228)
T ss_pred EEEECCCCCCHHHHHHHHHHhcCCCCceEEEcCccchhcchHHHHhhcCeeeechh-hhcccHHHHHhcCCCcc-----c
Confidence 999999999999999999999999999999998654 5999999995 48899999997543220 0
Q ss_pred HHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHHhhhcCCCccccccccccCChHHHHHHHHHHHHc
Q 005532 196 LERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFTADDGDRLVASFSSGWQMRMSLGKILL 275 (692)
Q Consensus 196 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~ 275 (692)
.+++.++.... ...+++..+.+ |+.+..+++ ..+|||||||||||||||+
T Consensus 456 ~~~i~~a~k~a-na~~fi~~lp~----------------------------g~~T~vge~-g~qLSGGQKQRIAIARalv 505 (1228)
T KOG0055|consen 456 REEIEEAAKAA-NAHDFILKLPD----------------------------GYDTLVGER-GVQLSGGQKQRIAIARALV 505 (1228)
T ss_pred HHHHHHHHHHc-cHHHHHHhhHH----------------------------hhcccccCC-CCCCChHHHHHHHHHHHHH
Confidence 01111111111 11122222221 222222333 4679999999999999999
Q ss_pred cCCCeEEEcCCCCCCCHHHHHHHHHHHcc--CCCeEEEEecCHHHHHhhcCeEEEEecceEEE---------eccChHHH
Q 005532 276 QDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVIISHDRAFLDQLCTKIVETEMGVSRT---------YEGNYSQY 344 (692)
Q Consensus 276 ~~p~lLLLDEPts~LD~~~~~~L~~~L~~--~~~tvI~vsHd~~~l~~~~d~i~~l~~G~~~~---------~~G~y~~~ 344 (692)
.+|+|||||||||+||+++.+.+.+.|.+ .|.|.|+|+|++..+.+ +|+|+++++|++.. ..|.|.+.
T Consensus 506 ~~P~ILLLDEaTSaLD~~se~~Vq~ALd~~~~grTTivVaHRLStIrn-aD~I~v~~~G~IvE~G~h~ELi~~~G~Y~~l 584 (1228)
T KOG0055|consen 506 RNPKILLLDEATSALDAESERVVQEALDKASKGRTTIVVAHRLSTIRN-ADKIAVMEEGKIVEQGTHDELIALGGIYSSL 584 (1228)
T ss_pred hCCCEEEecCcccccCHHHHHHHHHHHHHhhcCCeEEEEeeehhhhhc-cCEEEEEECCEEEEecCHHHHHhccchHHHH
Confidence 99999999999999999999999999864 58999999999999988 99999999998642 13555544
Q ss_pred HHHHHHHH------------HHHHHH-------------------------H-----------------H--------H-
Q 005532 345 VLEKAAWI------------ESQYAA-------------------------W-----------------E--------K- 361 (692)
Q Consensus 345 ~~~~~~~~------------~~~~~~-------------------------~-----------------~--------~- 361 (692)
+....... ...... . . |
T Consensus 585 v~~Q~~~~~~~~~~~~~~~~~~~~~s~~~s~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~s~~~i~k~~~pe~~ 664 (1228)
T KOG0055|consen 585 VRLQELEKAAEDEEEEESLKEERSRSLKSSSSSPSLSRGSNRSNLLSVKPEGEDPEEPVSEEDEKVSFWRIFKLNKPEWP 664 (1228)
T ss_pred HHHHhhhhhhhccccccchhhhhhhccccccccccccCCccccccccccccccccccccccccccccHHHHHHhccchhH
Confidence 32210000 000000 0 0 0
Q ss_pred ---------------------------------HHHHH---------------------------------HHHHHHHHH
Q 005532 362 ---------------------------------QQREI---------------------------------EQTKDLINR 375 (692)
Q Consensus 362 ---------------------------------~~~~~---------------------------------~~~~~~i~~ 375 (692)
-..++ +++..+++.
T Consensus 665 ~l~lG~i~a~i~G~~~P~fa~~~s~~~~~f~~~~~~~~~~~~~~~al~f~~l~~~~~i~~~~q~~~f~~~ge~Lt~R~R~ 744 (1228)
T KOG0055|consen 665 YLLLGSLGAAIRGATYPLFAYVFSQVLEAFYPPDDDELKREVRAWALIFLGLGIVSGITNFLQHYFFGIAGEKLTKRLRS 744 (1228)
T ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00000 000000000
Q ss_pred ------hcc-------CCcchhhh--------------------------------------------------------
Q 005532 376 ------LGA-------GANSGRAS-------------------------------------------------------- 386 (692)
Q Consensus 376 ------l~~-------~~~~~~~~-------------------------------------------------------- 386 (692)
+.. ..+++...
T Consensus 745 ~~F~~ll~qd~~wFD~~~nsg~l~~RLa~Da~~vr~~v~~rl~~vv~~~~~~~~~iiiaf~~~W~lalv~la~~Pll~~~ 824 (1228)
T KOG0055|consen 745 MMFRALLRQEVGWFDDPENSGALSSRLATDASNVRAAVGDRLSLVVQNIAAVIIGIIIAFIYGWRLALVVLATFPLLILS 824 (1228)
T ss_pred HHHHHHHcCCCcccCCCccchHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 000 00000000
Q ss_pred ----------------H-----------HHHHH---------HHHHH-H-hhhcccccc---------------------
Q 005532 387 ----------------S-----------AEKKL---------ERLQE-E-EQIEKPFQR--------------------- 407 (692)
Q Consensus 387 ----------------~-----------~~~~l---------~rl~~-~-~~~~~~~~~--------------------- 407 (692)
. +..++ +++.. + ....+|...
T Consensus 825 ~~~~~~~~~~~~~~~~~~~~ea~~iA~eai~NIrTV~al~~e~~~~~~y~~~l~~p~~~~~~~~~i~gl~f~~sqs~~~~ 904 (1228)
T KOG0055|consen 825 GYLQKKFLKGFSKDDKKAYEEASKIAIEAVSNIRTVAALCAEEKFMELYKEELEKPRKSSFKRGLISGLGFGFSQSLLFF 904 (1228)
T ss_pred HHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 00000 00000 0 000000000
Q ss_pred --------------------------------------------------------------cceeeecCC-CC---CCC
Q 005532 408 --------------------------------------------------------------KQMKIRFPE-RG---RSG 421 (692)
Q Consensus 408 --------------------------------------------------------------~~~~~~~~~-~~---~~~ 421 (692)
....++.+. .+ ..-
T Consensus 905 ~~A~~f~~G~~Li~~g~~~~~~~~~vf~~l~~ta~~~~~~~s~~Pd~~ka~~Aa~~iF~i~dr~~~i~~~~~~~~~~~~~ 984 (1228)
T KOG0055|consen 905 VYALSFWYGARLISNGEMTFEDVFRVFMALSFTAMALGQASSYAPDISKAKIAAGSIFEILDRKPTIDPDSTSGGKLPNV 984 (1228)
T ss_pred HHHHHHHHhHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCccccc
Confidence 000011000 01 011
Q ss_pred CceEEEEeEEEEcCCe---ecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccce---------
Q 005532 422 RSVVTIKNLEFGYEDR---LLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL--------- 489 (692)
Q Consensus 422 ~~~l~~~~l~~~y~~~---~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~~--------- 489 (692)
+.-|+++||+|.||.+ ++|+|+||+|++|+.+|||||+||||||.+.+|-+++.|++|.|.+||.+++
T Consensus 985 ~G~I~~~~V~F~YPsRP~~~Il~~l~l~i~~GqTvALVG~SGsGKSTvI~LLeRfYdp~~G~V~IDg~dik~lnl~~LR~ 1064 (1228)
T KOG0055|consen 985 KGDIEFRNVSFAYPTRPDVPVLNNLSLSIRAGQTVALVGPSGSGKSTVISLLERFYDPDAGKVKIDGVDIKDLNLKWLRK 1064 (1228)
T ss_pred eeEEEEeeeEeeCCCCCCchhhcCCcEEecCCCEEEEECCCCCCHHHHHHHHHHhcCCCCCeEEECCcccccCCHHHHHH
Confidence 2349999999999865 5999999999999999999999999999999999999999999999998874
Q ss_pred -eeeecccchhhcCCCccHHHHHHHHhccccHHHHHHHHhhcCCC------cccccc----cCCCCCHHHHHHHHHHHHh
Q 005532 490 -PNYFEQNQAEALDLDKTVLETVAEAAEDWRIDDIKGLLGRCNFK------ADMLDR----KVSLLSGGEKARLAFCKFM 558 (692)
Q Consensus 490 -~~~~~q~~~~~l~~~~tv~e~~~~~~~~~~~~~~~~~L~~~~l~------~~~~~~----~~~~LSgGqkqrv~LAral 558 (692)
.+.+.|.+ .| ++.|++||+..+......+++.+.++..+.. ++-.|. +..+||||||||+|||||+
T Consensus 1065 ~i~lVsQEP--~L-F~~TIrENI~YG~~~vs~~eIi~Aak~ANaH~FI~sLP~GyDT~vGerG~QLSGGQKQRIAIARAi 1141 (1228)
T KOG0055|consen 1065 QIGLVSQEP--VL-FNGTIRENIAYGSEEVSEEEIIEAAKLANAHNFISSLPQGYDTRVGERGVQLSGGQKQRIAIARAI 1141 (1228)
T ss_pred hcceeccCc--hh-hcccHHHHHhccCCCCCHHHHHHHHHHhhhHHHHhcCcCcccCccCcccCcCCchHHHHHHHHHHH
Confidence 23455543 34 6899999999884334556666655554321 122344 4459999999999999999
Q ss_pred ccCCcEEEEeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhccEEEEEECCEEEEecCChhHHHH
Q 005532 559 VKPSTLLVLDEPTNHLDIPSKEMLEEAISEY--KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYYLE 630 (692)
Q Consensus 559 ~~~p~lLlLDEPTn~LD~~~~~~l~~~l~~~--~~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~~~~~ 630 (692)
+++|+||||||.||+||.++.+.++++|.+. +.|.|+|+|++..+.+ ||.|+++++|++++ .|+.++...
T Consensus 1142 lRnPkILLLDEATSALDseSErvVQeALd~a~~gRT~IvIAHRLSTIqn-aD~I~Vi~~G~VvE-~GtH~~L~~ 1213 (1228)
T KOG0055|consen 1142 LRNPKILLLDEATSALDSESERVVQEALDRAMEGRTTIVIAHRLSTIQN-ADVIAVLKNGKVVE-QGTHDELLA 1213 (1228)
T ss_pred HcCCCeeeeeccchhhhhhhHHHHHHHHHHhhcCCcEEEEecchhhhhc-CCEEEEEECCEEEe-cccHHHHHh
Confidence 9999999999999999999999999999875 4699999999999988 99999999999996 588877765
No 24
>PRK13409 putative ATPase RIL; Provisional
Probab=100.00 E-value=6.2e-73 Score=647.38 Aligned_cols=420 Identities=25% Similarity=0.369 Sum_probs=321.7
Q ss_pred eEEEEeCCe-eceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEE-----------ECCCC---------
Q 005532 102 NISKSYKGV-TVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVI-----------KAKSN--------- 160 (692)
Q Consensus 102 ~ls~~y~~~-~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~-----------~~~~~--------- 160 (692)
+++++|+.. .+|++++ .+++|+++||+||||||||||+++|+|+++|++|+|. ++|..
T Consensus 78 ~~~~~yg~~~~~L~~l~-~i~~Gev~gLvG~NGaGKSTLlkiL~G~l~p~~G~i~~~~~~~~~~~~~~G~~l~~~~~~~~ 156 (590)
T PRK13409 78 EPVHRYGVNGFKLYGLP-IPKEGKVTGILGPNGIGKTTAVKILSGELIPNLGDYEEEPSWDEVLKRFRGTELQNYFKKLY 156 (590)
T ss_pred CceEEecCCceeEecCC-cCCCCCEEEEECCCCCCHHHHHHHHhCCccCCCccccCCCcHHHHHHHhCChHHHHHHHHHh
Confidence 489999875 5999999 9999999999999999999999999999999999997 55421
Q ss_pred ---ceEEEEcccCccCC---CCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCccc
Q 005532 161 ---MKIAFLSQEFEVSM---SRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDT 234 (692)
Q Consensus 161 ---~~i~~v~Q~~~~~~---~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (692)
.++++.+|.....+ ..||.+++.. ..
T Consensus 157 ~~~~~~~~~~q~~~~~p~~~~~tv~e~l~~------------------------------------------------~~ 188 (590)
T PRK13409 157 NGEIKVVHKPQYVDLIPKVFKGKVRELLKK------------------------------------------------VD 188 (590)
T ss_pred ccCcceeecccchhhhhhhhcchHHHHHHh------------------------------------------------hh
Confidence 23566565433222 2366665421 00
Q ss_pred HHHHHHHHhhhcCCCccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHccC--CCeEEEE
Q 005532 235 LDAKVSKLMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGKQ--DVPMVII 312 (692)
Q Consensus 235 ~~~~i~~ll~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~~--~~tvI~v 312 (692)
...++.++++.+|+. ...++++.+|||||||||+||+||+.+|+||||||||++||+.++.++.++|++. ++|||+|
T Consensus 189 ~~~~~~~~l~~l~l~-~~~~~~~~~LSgGe~qrv~ia~al~~~p~lllLDEPts~LD~~~~~~l~~~i~~l~~g~tvIiv 267 (590)
T PRK13409 189 ERGKLDEVVERLGLE-NILDRDISELSGGELQRVAIAAALLRDADFYFFDEPTSYLDIRQRLNVARLIRELAEGKYVLVV 267 (590)
T ss_pred HHHHHHHHHHHcCCc-hhhcCChhhCCHHHHHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEE
Confidence 123456778888986 5679999999999999999999999999999999999999999999998877543 8999999
Q ss_pred ecCHHHHHhhcCeEEEEecceEEEeccChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchhhhHHHHHH
Q 005532 313 SHDRAFLDQLCTKIVETEMGVSRTYEGNYSQYVLEKAAWIESQYAAWEKQQREIEQTKDLINRLGAGANSGRASSAEKKL 392 (692)
Q Consensus 313 sHd~~~l~~~~d~i~~l~~G~~~~~~G~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~l 392 (692)
|||++++..+||+|+++.++. |.|..+....... .. ..+++..+.. . . .+
T Consensus 268 sHd~~~l~~~~D~v~vl~~~~-----g~~g~~~~~~~~~------------~~---i~~~~~~~~~-----~----e-~~ 317 (590)
T PRK13409 268 EHDLAVLDYLADNVHIAYGEP-----GAYGVVSKPKGVR------------VG---INEYLKGYLP-----E----E-NM 317 (590)
T ss_pred eCCHHHHHHhCCEEEEEeCCc-----cccceecchhHHH------------Hh---HHHHHHhcch-----h----h-hh
Confidence 999999999999999997542 2221111110000 00 0011110000 0 0 00
Q ss_pred HHHHHHhhhcccccccceeeecCCC--CCCCCceEEEEeEEEEcCCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHH
Q 005532 393 ERLQEEEQIEKPFQRKQMKIRFPER--GRSGRSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLI 470 (692)
Q Consensus 393 ~rl~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~~l~~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L 470 (692)
+.. .. ...+.+++. ...+.++++++|+++.|++. .|+++||+|++||++||+||||||||||+++|
T Consensus 318 -~~~-----~~-----~~~~~~~~~~~~~~~~~~l~~~~ls~~~~~~-~l~~~s~~i~~Geiv~l~G~NGsGKSTLlk~L 385 (590)
T PRK13409 318 -RIR-----PE-----PIEFEERPPRDESERETLVEYPDLTKKLGDF-SLEVEGGEIYEGEVIGIVGPNGIGKTTFAKLL 385 (590)
T ss_pred -hcc-----cc-----CcceecCCCccccCCceEEEEcceEEEECCE-EEEecceEECCCCEEEEECCCCCCHHHHHHHH
Confidence 000 00 000111111 11345689999999999875 48999999999999999999999999999999
Q ss_pred hcCCCCCeeEEEECCccceeeeecccchhhcCCCccHHHHHHHHhcccc-HHHHHHHHhhcCCCcccccccCCCCCHHHH
Q 005532 471 MGLEKPRGGEVLLGEHNVLPNYFEQNQAEALDLDKTVLETVAEAAEDWR-IDDIKGLLGRCNFKADMLDRKVSLLSGGEK 549 (692)
Q Consensus 471 ~g~~~p~~G~i~~~~~~~~~~~~~q~~~~~l~~~~tv~e~~~~~~~~~~-~~~~~~~L~~~~l~~~~~~~~~~~LSgGqk 549 (692)
+|+++|++|+|.++ +..+|++|.. .+.+..|+.+++........ ...+.++|+.+++. +..++++.+||||||
T Consensus 386 ~Gl~~p~~G~I~~~---~~i~y~~Q~~--~~~~~~tv~e~l~~~~~~~~~~~~~~~~L~~l~l~-~~~~~~~~~LSGGe~ 459 (590)
T PRK13409 386 AGVLKPDEGEVDPE---LKISYKPQYI--KPDYDGTVEDLLRSITDDLGSSYYKSEIIKPLQLE-RLLDKNVKDLSGGEL 459 (590)
T ss_pred hCCCCCCceEEEEe---eeEEEecccc--cCCCCCcHHHHHHHHhhhcChHHHHHHHHHHCCCH-HHHhCCcccCCHHHH
Confidence 99999999999885 4567888764 34578899999876422221 23467899999995 678999999999999
Q ss_pred HHHHHHHHhccCCcEEEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEECCEEEE
Q 005532 550 ARLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQD 620 (692)
Q Consensus 550 qrv~LAral~~~p~lLlLDEPTn~LD~~~~~~l~~~l~~~----~~tviivSHd~~~l~~~~d~i~~l~~g~l~~ 620 (692)
|||+|||||+.+|+||||||||+|||+.++..+.+.|+++ ++|||+||||++++..+||||++|++ ++..
T Consensus 460 QRvaiAraL~~~p~llLLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tviivsHD~~~~~~~aDrvivl~~-~~~~ 533 (590)
T PRK13409 460 QRVAIAACLSRDADLYLLDEPSAHLDVEQRLAVAKAIRRIAEEREATALVVDHDIYMIDYISDRLMVFEG-EPGK 533 (590)
T ss_pred HHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEcC-ccee
Confidence 9999999999999999999999999999999999999876 56999999999999999999999975 5543
No 25
>COG4172 ABC-type uncharacterized transport system, duplicated ATPase component [General function prediction only]
Probab=100.00 E-value=8.5e-72 Score=576.90 Aligned_cols=447 Identities=21% Similarity=0.337 Sum_probs=359.5
Q ss_pred CCCcEEEEeEEEEeC----CeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCC-----CccEEEECCCC----
Q 005532 94 ISSGVKLENISKSYK----GVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEP-----DSGNVIKAKSN---- 160 (692)
Q Consensus 94 ~~~~l~i~~ls~~y~----~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p-----~~G~I~~~~~~---- 160 (692)
.++.++++|++..|. ...++++|||+|.+||.+||||++|||||-..+.|+|+++. -+|+|.++|.+
T Consensus 3 ~~~lL~v~nLsV~f~~~~~~~~aVk~isf~i~~GEtlAlVGESGSGKSvTa~sim~LLp~~~~~~~sg~i~f~G~dll~~ 82 (534)
T COG4172 3 TMPLLSIRNLSVAFHQEGGTVEAVKGISFDIEAGETLALVGESGSGKSVTALSILGLLPSPAAAHPSGSILFDGEDLLAA 82 (534)
T ss_pred CCcceeeeccEEEEecCCcceEeeccceeeecCCCEEEEEecCCCCccHHHHHHHHhcCCCcccCccceeEEcChhhhcC
Confidence 356799999999995 45799999999999999999999999999999999999975 36899998753
Q ss_pred ----------ceEEEEcccCccC--CCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHh
Q 005532 161 ----------MKIAFLSQEFEVS--MSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQ 228 (692)
Q Consensus 161 ----------~~i~~v~Q~~~~~--~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (692)
.+|++++|+|... +-.||..-+...+ +...
T Consensus 83 se~~lr~iRG~~I~MIFQEPMtSLNPl~tIg~Qi~E~l--------------------------------------~~Hr 124 (534)
T COG4172 83 SERQLRGVRGNKIGMIFQEPMTSLNPLHTIGKQLAEVL--------------------------------------RLHR 124 (534)
T ss_pred CHHHHhhhcccceEEEecccccccCcHhHHHHHHHHHH--------------------------------------HHHh
Confidence 3799999998532 3234443332110 1122
Q ss_pred hcCcccHHHHHHHHhhhcCCCcc--ccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHc---
Q 005532 229 AVNLDTLDAKVSKLMPELGFTAD--DGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG--- 303 (692)
Q Consensus 229 ~~~~~~~~~~i~~ll~~lgl~~~--~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~--- 303 (692)
.+.....++++.++|+.+|++++ .++.++.+|||||+|||+||.||+.+|++||.||||.+||.....++.++|+
T Consensus 125 g~~~~~Ar~r~lelL~~VgI~~p~~rl~~yPHeLSGGqRQRVMIAMALan~P~lLIADEPTTALDVtvQaQIL~Ll~~Lq 204 (534)
T COG4172 125 GLSRAAARARALELLELVGIPEPEKRLDAYPHELSGGQRQRVMIAMALANEPDLLIADEPTTALDVTVQAQILDLLKELQ 204 (534)
T ss_pred cccHHHHHHHHHHHHHHcCCCchhhhhhhCCcccCcchhhHHHHHHHHcCCCCeEeecCCcchhhhhhHHHHHHHHHHHH
Confidence 34455667889999999999743 4678899999999999999999999999999999999999999998888775
Q ss_pred -cCCCeEEEEecCHHHHHhhcCeEEEEecceEEEeccChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcc
Q 005532 304 -KQDVPMVIISHDRAFLDQLCTKIVETEMGVSRTYEGNYSQYVLEKAAWIESQYAAWEKQQREIEQTKDLINRLGAGANS 382 (692)
Q Consensus 304 -~~~~tvI~vsHd~~~l~~~~d~i~~l~~G~~~~~~G~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~ 382 (692)
+.|.++++||||+..+.+++|+|++|.+|++. -.|.....+.. ....| ++.+++.
T Consensus 205 ~~~gMa~lfITHDL~iVr~~ADrV~VM~~G~iv-E~~~t~~lF~~-------PqHpY---------Tr~Ll~a------- 260 (534)
T COG4172 205 AELGMAILFITHDLGIVRKFADRVYVMQHGEIV-ETGTTETLFAA-------PQHPY---------TRKLLAA------- 260 (534)
T ss_pred HHhCcEEEEEeccHHHHHHhhhhEEEEeccEEe-ecCcHHHHhhC-------CCChH---------HHHHHhc-------
Confidence 47999999999999999999999999999974 33432221110 00011 1111110
Q ss_pred hhhhHHHHHHHHHHHHhhhcccccccceeeecCCCCCCCCceEEEEeEEEEcCC-----------eecccceeEEEeCCC
Q 005532 383 GRASSAEKKLERLQEEEQIEKPFQRKQMKIRFPERGRSGRSVVTIKNLEFGYED-----------RLLFNRANLTIERGE 451 (692)
Q Consensus 383 ~~~~~~~~~l~rl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~y~~-----------~~~l~~isl~i~~Ge 451 (692)
.|... .++.+....++++.++|...|+- ..+++++||++.+|+
T Consensus 261 --------------------eP~g~------~~p~~~~~~~ll~~~~v~v~f~i~~g~~~r~~~~~~AVd~isl~L~~gq 314 (534)
T COG4172 261 --------------------EPSGD------PPPLPEDAPVLLEVEDLRVWFPIKGGFLRRTVDHLRAVDGISLTLRRGQ 314 (534)
T ss_pred --------------------CCCCC------CCCCCCCCCceEEecceEEEEecCCccccccchheEEeccceeEecCCC
Confidence 11111 02223346678999999999952 246899999999999
Q ss_pred EEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccce-------------eeeecccchhhcCCCccHHHHHHHHhc--
Q 005532 452 KTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL-------------PNYFEQNQAEALDLDKTVLETVAEAAE-- 516 (692)
Q Consensus 452 ~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~~-------------~~~~~q~~~~~l~~~~tv~e~~~~~~~-- 516 (692)
.+||||.+|||||||-.+|.+++++. |+|.++|.++. ...++|++...+.|.+||.+.+.+...
T Consensus 315 TlGlVGESGSGKsTlG~allrL~~s~-G~I~F~G~~i~~~~~~~mrplR~~mQvVFQDPygSLsPRmtV~qII~EGL~vh 393 (534)
T COG4172 315 TLGLVGESGSGKSTLGLALLRLIPSQ-GEIRFDGQDIDGLSRKEMRPLRRRMQVVFQDPYGSLSPRMTVGQIIEEGLRVH 393 (534)
T ss_pred eEEEEecCCCCcchHHHHHHhhcCcC-ceEEECCccccccChhhhhhhhhhceEEEeCCCCCCCcccCHHHHhhhhhhhc
Confidence 99999999999999999999999886 99999998763 245677777788999999999876532
Q ss_pred ------cccHHHHHHHHhhcCCCcccccccCCCCCHHHHHHHHHHHHhccCCcEEEEeCCCCCCCHHHHHHHHHHHHhc-
Q 005532 517 ------DWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY- 589 (692)
Q Consensus 517 ------~~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~LAral~~~p~lLlLDEPTn~LD~~~~~~l~~~l~~~- 589 (692)
....+.+.+.|..+|++....+++++++|||||||++||||++.+|.+++||||||.||..-...+.++|++.
T Consensus 394 ~~~ls~~eR~~rv~~aL~EVGLDp~~r~RYPhEFSGGQRQRIAIARAliLkP~~i~LDEPTSALD~SVQaQvv~LLr~LQ 473 (534)
T COG4172 394 EPKLSAAERDQRVIEALEEVGLDPATRNRYPHEFSGGQRQRIAIARALILKPELILLDEPTSALDRSVQAQVLDLLRDLQ 473 (534)
T ss_pred CCCCCHHHHHHHHHHHHHHcCCChhHhhcCCcccCcchhhHHHHHHHHhcCCcEEEecCCchHhhHHHHHHHHHHHHHHH
Confidence 1224568889999999999999999999999999999999999999999999999999999999999988754
Q ss_pred ---CceEEEEecCHHHHHhhccEEEEEECCEEEEecCChhHHHH
Q 005532 590 ---KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYYLE 630 (692)
Q Consensus 590 ---~~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~~~~~ 630 (692)
+-+.++||||+..+..+||+|++|.+|++++. |+.+..+.
T Consensus 474 ~k~~LsYLFISHDL~VvrAl~~~viVm~~GkiVE~-G~~~~if~ 516 (534)
T COG4172 474 QKHGLSYLFISHDLAVVRALCHRVIVMRDGKIVEQ-GPTEAVFA 516 (534)
T ss_pred HHhCCeEEEEeccHHHHHHhhceEEEEeCCEEeee-CCHHHHhc
Confidence 45999999999999999999999999999974 76666554
No 26
>KOG0054 consensus Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=3.3e-71 Score=658.94 Aligned_cols=547 Identities=24% Similarity=0.401 Sum_probs=403.7
Q ss_pred cccccceeeccccccccCCC--ccchhhhhcchhhHHHHhHHHHHHhhhccCccccccccccccCCCCCCCCCCCcEEEE
Q 005532 24 PFASAKSFTNSLNFTKKQRP--RITCQVSAATVEKKSIAKAQSDVESLFSSSADEFENKKYSNKQSNTGASSISSGVKLE 101 (692)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~ 101 (692)
.+++...|.....|+.++.| .+|..++..++..+|+.+ +..++..++........ .........++++
T Consensus 453 ~lt~~~aF~slalfniLr~pl~~~P~~i~~~vqa~VS~~R----i~~fl~~~e~~~~~~~~------~~~~~~~~~i~i~ 522 (1381)
T KOG0054|consen 453 LLTASTAFTSLALFNILRFPLFMLPSVISQLVQAKVSLKR----LKEFLLSEELDPDSVER------SPDEAGENAIEIK 522 (1381)
T ss_pred cccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHhcCcccCcccccc------CCCCCCCceEEEe
Confidence 45566788888888888888 688899999999999999 77777665433211111 1111234569999
Q ss_pred eEEEEeCC---eeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCCceEEEEcccCccCCCCCH
Q 005532 102 NISKSYKG---VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSNMKIAFLSQEFEVSMSRTV 178 (692)
Q Consensus 102 ~ls~~y~~---~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~~~i~~v~Q~~~~~~~~Tv 178 (692)
|.+|+|+. .+.|+||||+|++|+.+||||+.|||||+||.+|+|+++..+|+|.++| .++||||.||+ ++.||
T Consensus 523 ~~sfsW~~~~~~~tL~dIn~~i~~G~lvaVvG~vGsGKSSLL~AiLGEm~~~sG~v~v~g---siaYv~Q~pWI-~ngTv 598 (1381)
T KOG0054|consen 523 NGSFSWDSESPEPTLKDINFEIKKGQLVAVVGPVGSGKSSLLSAILGEMPKLSGSVAVNG---SVAYVPQQPWI-QNGTV 598 (1381)
T ss_pred eeeEecCCCCCcccccceeEEecCCCEEEEECCCCCCHHHHHHHHhcCcccccceEEEcC---eEEEeccccHh-hCCcH
Confidence 99999965 3499999999999999999999999999999999999999999999875 59999999998 78999
Q ss_pred HHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHHhhhcCCCccccccccc
Q 005532 179 REEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFTADDGDRLVA 258 (692)
Q Consensus 179 ~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl~~~~~~~~~~ 258 (692)
+|||+.+ ..++. + +|..++.+|.++++++-+ . .|..++.+++ ..
T Consensus 599 reNILFG--~~~d~----~---------------------------rY~~Vi~aC~L~~Dle~L-p-~GD~TeIGEr-Gi 642 (1381)
T KOG0054|consen 599 RENILFG--SPYDE----E---------------------------RYDKVIKACALKKDLEIL-P-FGDLTEIGER-GI 642 (1381)
T ss_pred HHhhhcC--ccccH----H---------------------------HHHHHHHHccCHhHHhhc-C-CCCcceecCC-cc
Confidence 9999843 32221 2 333444455555555433 2 2444455555 89
Q ss_pred cCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHH-Hcc--CCCeEEEEecCHHHHHhhcCeEEEEecceEE
Q 005532 259 SFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGY-LGK--QDVPMVIISHDRAFLDQLCTKIVETEMGVSR 335 (692)
Q Consensus 259 ~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~-L~~--~~~tvI~vsHd~~~l~~~~d~i~~l~~G~~~ 335 (692)
+|||||||||+||||+|+++||+|||+|+|++|+++..+|.+. ++. .++|+|+|||.++++.+ ||.|++|++|++
T Consensus 643 nLSGGQKqRIsLARAVY~~adIYLLDDplSAVDahvg~~if~~ci~~~L~~KT~ILVTHql~~L~~-ad~Iivl~~G~I- 720 (1381)
T KOG0054|consen 643 NLSGGQKQRISLARAVYQDADIYLLDDPLSAVDAHVGKHIFEECIRGLLRGKTVILVTHQLQFLPH-ADQIIVLKDGKI- 720 (1381)
T ss_pred CCcHhHHHHHHHHHHHhccCCEEEEcCcchhhhHhhhHHHHHHHHHhhhcCCEEEEEeCchhhhhh-CCEEEEecCCeE-
Confidence 9999999999999999999999999999999999999988763 322 37999999999999976 999999999997
Q ss_pred EeccChHHHHHHHH-----------------------------------------------------HHH-HH-------
Q 005532 336 TYEGNYSQYVLEKA-----------------------------------------------------AWI-ES------- 354 (692)
Q Consensus 336 ~~~G~y~~~~~~~~-----------------------------------------------------~~~-~~------- 354 (692)
...|+|++...... ... ..
T Consensus 721 ~~~Gty~el~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ee~~~G~ 800 (1381)
T KOG0054|consen 721 VESGTYEELLKSGGDFAELAHEEESEQEEEASEKDLESGESSRESESRSLESLSSEEEKSKDEKEEEDKLVQEEERETGK 800 (1381)
T ss_pred ecccCHHHHHhcchhHHHHhhccchhhccccccccccccccccchhhhhhhhhcccccccccccchhhHHHHHHHHhcCE
Confidence 46677765442000 000 00
Q ss_pred --------------------------------------HHHHH----------------H--------------------
Q 005532 355 --------------------------------------QYAAW----------------E-------------------- 360 (692)
Q Consensus 355 --------------------------------------~~~~~----------------~-------------------- 360 (692)
+...| .
T Consensus 801 v~~~vY~~Y~~a~~g~~~~~~~~~~~v~~~~~~~~~~~WLs~W~~~~~~~~~~~~~~~~~~~vY~~l~~~~~~~~~~rs~ 880 (1381)
T KOG0054|consen 801 VSWSVYKKYIKAAGGFLLVLLILLLFVLTQVLQIASNYWLSYWTDDGEDNGTTTVSTSFYLGVYALLGVASSLLTLLRSF 880 (1381)
T ss_pred eeHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccCCCcchHHHHHHHHHHHHHHHHHHHHH
Confidence 00000 0
Q ss_pred --------------------------------------------------------------------------------
Q 005532 361 -------------------------------------------------------------------------------- 360 (692)
Q Consensus 361 -------------------------------------------------------------------------------- 360 (692)
T Consensus 881 ~~~~~~l~aS~~Lh~~ml~~Ilrapm~FFdtTP~GRILNRFSkD~~~vD~~Lp~~~~~~~~~~~~~l~~~~vi~~~~P~f 960 (1381)
T KOG0054|consen 881 LFAKGGLKASRKLHDKLLNSILRAPMSFFDTTPTGRILNRFSKDIDTVDVLLPFTLEFFLQSLLNVLGILVVISYVTPWF 960 (1381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCcchhcCCCCccchhhhcccchHHHHHhhHHHHHHHHHHHHHHHHHHHHhhHHhHHH
Confidence
Q ss_pred ------------------------------------------------------HHHHHHHHHHHHH-------------
Q 005532 361 ------------------------------------------------------KQQREIEQTKDLI------------- 373 (692)
Q Consensus 361 ------------------------------------------------------~~~~~~~~~~~~i------------- 373 (692)
++...++++...+
T Consensus 961 li~~~pl~v~~~~~~~~Y~~tsReLkRLesitRSPi~sh~~Etl~GlsTIRAf~~~~rf~~~~~~~~D~~~~~~f~~~~a 1040 (1381)
T KOG0054|consen 961 LIAIIPLGVIYYFVQRYYLATSRELKRLESITRSPIYSHFSETLQGLSTIRAFGKEERFIQENDELIDENSRAFFLSISA 1040 (1381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHhhhcccchHHHhHHHHhcCcceeeeccccHHHHHHHHHHhhhhHHHHHHHHHH
Confidence 0000011111111
Q ss_pred --------HHhc---------------cC-CcchhhhHH------------------------HHHHHHHHHHhhhcccc
Q 005532 374 --------NRLG---------------AG-ANSGRASSA------------------------EKKLERLQEEEQIEKPF 405 (692)
Q Consensus 374 --------~~l~---------------~~-~~~~~~~~~------------------------~~~l~rl~~~~~~~~~~ 405 (692)
+-+. .. .++|.++-+ ...+||+.++....++
T Consensus 1041 ~RWla~Rle~ig~~~v~~~al~~vl~~~~~~~~g~vGLslsyal~lt~~l~~~vR~~~elEn~m~SVERv~eY~~~~~E- 1119 (1381)
T KOG0054|consen 1041 NRWLAVRLELLGNLVVLIAALFAVLLPSGLISPGLVGLSLSYALQLTGLLQWLVRQSSELENNMVSVERVLEYTDIPSE- 1119 (1381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhhHHHHHhcCCCC-
Confidence 1110 01 123332111 1123677666543222
Q ss_pred cccceeeecCCCCCCCCceEEEEeEEEEcCC--eecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEE
Q 005532 406 QRKQMKIRFPERGRSGRSVVTIKNLEFGYED--RLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLL 483 (692)
Q Consensus 406 ~~~~~~~~~~~~~~~~~~~l~~~~l~~~y~~--~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~ 483 (692)
.+....-..|+..||.++-|+++|++.+|.. ..+|+||||+|++||+|||||++|||||||+.+|.++.+|.+|+|.+
T Consensus 1120 ~p~~~~~~~pp~~WP~~G~I~f~~~~~RYrp~lp~VLk~is~~I~p~eKVGIVGRTGaGKSSL~~aLFRl~e~~~G~I~I 1199 (1381)
T KOG0054|consen 1120 APLEIEESRPPPSWPSKGEIEFEDLSLRYRPNLPLVLKGISFTIKPGEKVGIVGRTGAGKSSLILALFRLVEPAEGEILI 1199 (1381)
T ss_pred CCCCCcCCCCCCCCCCCCeEEEEEeEEEeCCCCcchhcCceEEEcCCceEEEeCCCCCCHHHHHHHHHHhcCccCCeEEE
Confidence 1111111116778999999999999999964 47999999999999999999999999999999999999999999999
Q ss_pred CCccce----------eeeecccchhhcCCCccHHHHHHHHhccccHHHHHHHHhhcCCCcc------cccccC----CC
Q 005532 484 GEHNVL----------PNYFEQNQAEALDLDKTVLETVAEAAEDWRIDDIKGLLGRCNFKAD------MLDRKV----SL 543 (692)
Q Consensus 484 ~~~~~~----------~~~~~q~~~~~l~~~~tv~e~~~~~~~~~~~~~~~~~L~~~~l~~~------~~~~~~----~~ 543 (692)
||.++. ....+|++ .+ ++-|++.|+.-. ..+.++++++.|+.+++... .+|..+ .+
T Consensus 1200 DgvdI~~igL~dLRsrlsIIPQdP--vL-FsGTvR~NLDPf-~e~sD~~IW~ALe~~~Lk~~v~~~p~~Ld~~v~egG~N 1275 (1381)
T KOG0054|consen 1200 DGVDISKIGLHDLRSRLSIIPQDP--VL-FSGTVRFNLDPF-DEYSDDEIWEALERCQLKDVVSSLPGGLDSEVSEGGEN 1275 (1381)
T ss_pred cCeecccccHHHHHhcCeeeCCCC--ce-ecCccccccCcc-cccCHHHHHHHHHHhChHHHHhhCCcCCCceecCCCcc
Confidence 998873 23455543 33 577888887643 34566778888888777421 133333 47
Q ss_pred CCHHHHHHHHHHHHhccCCcEEEEeCCCCCCCHHHHHHHHHHHHh-cC-ceEEEEecCHHHHHhhccEEEEEECCEEEEe
Q 005532 544 LSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISE-YK-GTVITVSHDRYFVKQIVNRVVEVKGSNLQDY 621 (692)
Q Consensus 544 LSgGqkqrv~LAral~~~p~lLlLDEPTn~LD~~~~~~l~~~l~~-~~-~tviivSHd~~~l~~~~d~i~~l~~g~l~~~ 621 (692)
+|-||||.|||||||+++++||+|||+|+++|+++...|++.|++ |+ .|||.|.|++..+.+ ||||+||++|++.+|
T Consensus 1276 ~SvGQRQLlCLARALLr~skILvLDEATAsVD~~TD~lIQ~tIR~~F~dcTVltIAHRl~TVmd-~DrVlVld~G~v~Ef 1354 (1381)
T KOG0054|consen 1276 FSVGQRQLLCLARALLRKSKILVLDEATASVDPETDALIQKTIREEFKDCTVLTIAHRLNTVMD-SDRVLVLDAGRVVEF 1354 (1381)
T ss_pred CChHHHHHHHHHHHHhccCCEEEEecccccCChHHHHHHHHHHHHHhcCCeEEEEeeccchhhh-cCeEEEeeCCeEeec
Confidence 999999999999999999999999999999999999999999995 54 599999999999999 999999999999999
Q ss_pred cCChhHH
Q 005532 622 AGDYNYY 628 (692)
Q Consensus 622 ~g~~~~~ 628 (692)
+-++.-+
T Consensus 1355 dsP~~Ll 1361 (1381)
T KOG0054|consen 1355 DSPAELL 1361 (1381)
T ss_pred CChHHHH
Confidence 7766544
No 27
>COG1129 MglA ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.6e-70 Score=597.51 Aligned_cols=433 Identities=25% Similarity=0.397 Sum_probs=356.1
Q ss_pred CCcEEEEeEEEEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC-----------ceE
Q 005532 95 SSGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN-----------MKI 163 (692)
Q Consensus 95 ~~~l~i~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~-----------~~i 163 (692)
.+.++++|++|+||+.++|++|||+|.+||+++|+|.||||||||+|+|+|.++|++|+|.++|.. ..|
T Consensus 6 ~~ll~~~~i~K~FggV~AL~~v~l~v~~GEV~aL~GeNGAGKSTLmKiLsGv~~p~~G~I~~~G~~~~~~sp~~A~~~GI 85 (500)
T COG1129 6 PPLLELRGISKSFGGVKALDGVSLTVRPGEVHALLGENGAGKSTLMKILSGVYPPDSGEILIDGKPVAFSSPRDALAAGI 85 (500)
T ss_pred cceeeeecceEEcCCceeeccceeEEeCceEEEEecCCCCCHHHHHHHHhCcccCCCceEEECCEEccCCCHHHHHhCCc
Confidence 457999999999999999999999999999999999999999999999999999999999999853 359
Q ss_pred EEEcccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHHh
Q 005532 164 AFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLM 243 (692)
Q Consensus 164 ~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll 243 (692)
+.++|++.+.+++||.|||+.+-... .....++...+.++..++|
T Consensus 86 ~~V~QEl~L~p~LsVaeNifLgre~~-----------------------------------~~~g~id~~~m~~~A~~~l 130 (500)
T COG1129 86 ATVHQELSLVPNLSVAENIFLGREPT-----------------------------------RRFGLIDRKAMRRRARELL 130 (500)
T ss_pred EEEeechhccCCccHHHHhhcccccc-----------------------------------cCCCccCHHHHHHHHHHHH
Confidence 99999999999999999996321100 0012355567788899999
Q ss_pred hhcCCCccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHH---ccCCCeEEEEecCHHHHH
Q 005532 244 PELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYL---GKQDVPMVIISHDRAFLD 320 (692)
Q Consensus 244 ~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L---~~~~~tvI~vsHd~~~l~ 320 (692)
..+|+. ...+.++.+||+||||.|+|||||..+++||||||||++|+....+.|++++ ++.|.+||+|||.++++.
T Consensus 131 ~~lg~~-~~~~~~v~~LsiaqrQ~VeIArAl~~~arllIlDEPTaaLt~~E~~~Lf~~ir~Lk~~Gv~ii~ISHrl~Ei~ 209 (500)
T COG1129 131 ARLGLD-IDPDTLVGDLSIAQRQMVEIARALSFDARVLILDEPTAALTVKETERLFDLIRRLKAQGVAIIYISHRLDEVF 209 (500)
T ss_pred HHcCCC-CChhhhhhhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEcCcHHHHH
Confidence 999996 3478999999999999999999999999999999999999999999988765 568999999999999999
Q ss_pred hhcCeEEEEecceEEEeccCh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchhhhHHHHHHHHHHHHh
Q 005532 321 QLCTKIVETEMGVSRTYEGNY-SQYVLEKAAWIESQYAAWEKQQREIEQTKDLINRLGAGANSGRASSAEKKLERLQEEE 399 (692)
Q Consensus 321 ~~~d~i~~l~~G~~~~~~G~y-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~l~rl~~~~ 399 (692)
++||+|.+|++|+.. -.+.. .++- ..+.+..+.+ +. +
T Consensus 210 ~i~DritVlRDG~~v-~~~~~~~~~~-----------------------~~~lv~~MvG-----r~------~------- 247 (500)
T COG1129 210 EIADRITVLRDGRVV-GTRPTAAETS-----------------------EDELVRLMVG-----RE------L------- 247 (500)
T ss_pred HhcCEEEEEeCCEEe-eecccccCCC-----------------------HHHHHHHhhC-----cc------h-------
Confidence 999999999999863 11210 1100 0011111111 10 0
Q ss_pred hhcccccccceeeecC--CCCCCCCceEEEEeEEEEcCCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCC
Q 005532 400 QIEKPFQRKQMKIRFP--ERGRSGRSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPR 477 (692)
Q Consensus 400 ~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~l~~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~ 477 (692)
.. .+| .....+.++++++|++.. ..++|+||++++||++||.|-=|||+|-|+++|.|..++.
T Consensus 248 --~~---------~~~~~~~~~~~~~~l~v~~l~~~----~~~~dvSf~vr~GEIlGiaGLvGaGRTEl~~~lfG~~~~~ 312 (500)
T COG1129 248 --ED---------LFPEPPEEGIGEPVLEVRNLSGG----GKVRDVSFTVRAGEILGIAGLVGAGRTELARALFGARPAS 312 (500)
T ss_pred --hh---------hcccccccCCCCcEEEEecCCCC----CceeCceeEEeCCcEEEEeccccCCHHHHHHHHhCCCcCC
Confidence 00 011 111345678999998753 2589999999999999999999999999999999999999
Q ss_pred eeEEEECCccce-----------eeeecc-cchhhcCCCccHHHHHHHHhc-----c-c-c----HHHHHHHHhhcCCCc
Q 005532 478 GGEVLLGEHNVL-----------PNYFEQ-NQAEALDLDKTVLETVAEAAE-----D-W-R----IDDIKGLLGRCNFKA 534 (692)
Q Consensus 478 ~G~i~~~~~~~~-----------~~~~~q-~~~~~l~~~~tv~e~~~~~~~-----~-~-~----~~~~~~~L~~~~l~~ 534 (692)
+|+|.++|.++. ++|++. .....+...+++.+|+....- . + + ...+..+...+++..
T Consensus 313 ~G~i~l~G~~v~~~sp~~Ai~~Gi~~v~EDRk~~Gl~l~~sI~~Ni~l~~l~~~~~~~~i~~~~e~~~~~~~~~~l~Ik~ 392 (500)
T COG1129 313 SGEILLDGKPVRIRSPRDAIKAGIAYVPEDRKSEGLVLDMSIAENITLASLRRFSRRGLIDRRKERALAERYIRRLRIKT 392 (500)
T ss_pred CceEEECCEEccCCCHHHHHHcCCEeCCcccccCcCcCCCcHHHheehHhhhhhccccccChHHHHHHHHHHHHhcCccc
Confidence 999999998663 235543 245678889999999865411 0 1 1 124677889999988
Q ss_pred ccccccCCCCCHHHHHHHHHHHHhccCCcEEEEeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhccEEE
Q 005532 535 DMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVV 611 (692)
Q Consensus 535 ~~~~~~~~~LSgGqkqrv~LAral~~~p~lLlLDEPTn~LD~~~~~~l~~~l~~~---~~tviivSHd~~~l~~~~d~i~ 611 (692)
...+.++.+||||.||||.|||+|..+|+||||||||.|+|+.++..++++|+++ +.+||+||-|+.++..+||||+
T Consensus 393 ~s~~~~v~~LSGGNQQKVvlarwL~~~p~vLilDEPTRGIDVGAK~eIy~li~~lA~~G~ail~iSSElpEll~~~DRIl 472 (500)
T COG1129 393 PSPEQPIGTLSGGNQQKVVLARWLATDPKVLILDEPTRGIDVGAKAEIYRLIRELAAEGKAILMISSELPELLGLSDRIL 472 (500)
T ss_pred CCccchhhcCCchhhhhHHHHHHHhcCCCEEEECCCCcCcccchHHHHHHHHHHHHHCCCEEEEEeCChHHHHhhCCEEE
Confidence 8889999999999999999999999999999999999999999999999999976 4599999999999999999999
Q ss_pred EEECCEEEE
Q 005532 612 EVKGSNLQD 620 (692)
Q Consensus 612 ~l~~g~l~~ 620 (692)
+|.+|++..
T Consensus 473 Vm~~Gri~~ 481 (500)
T COG1129 473 VMREGRIVG 481 (500)
T ss_pred EEECCEEEE
Confidence 999999985
No 28
>PLN03130 ABC transporter C family member; Provisional
Probab=100.00 E-value=3.1e-69 Score=673.88 Aligned_cols=486 Identities=20% Similarity=0.347 Sum_probs=339.0
Q ss_pred CcEEEEeEEEEeCC---eeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCc-cEEEECCCCceEEEEcccCc
Q 005532 96 SGVKLENISKSYKG---VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDS-GNVIKAKSNMKIAFLSQEFE 171 (692)
Q Consensus 96 ~~l~i~~ls~~y~~---~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~-G~I~~~~~~~~i~~v~Q~~~ 171 (692)
+.|+++|++|+|++ +++|+|+||+|++|++++||||+|||||||+++|+|+++|++ |+|.+. ..|+||+|+||
T Consensus 613 ~~I~~~nvsf~y~~~~~~~vL~~inl~i~~Ge~vaIvG~sGSGKSTLl~lLlG~~~~~~GG~I~l~---~~Iayv~Q~p~ 689 (1622)
T PLN03130 613 PAISIKNGYFSWDSKAERPTLSNINLDVPVGSLVAIVGSTGEGKTSLISAMLGELPPRSDASVVIR---GTVAYVPQVSW 689 (1622)
T ss_pred CceEEEeeEEEccCCCCCceeeceeEEecCCCEEEEECCCCCCHHHHHHHHHHhhccCCCceEEEc---CeEEEEcCccc
Confidence 35999999999974 569999999999999999999999999999999999999999 999874 48999999999
Q ss_pred cCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHHhhhcCCCcc
Q 005532 172 VSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFTAD 251 (692)
Q Consensus 172 ~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl~~~ 251 (692)
+ ++.||+|||..+-. .+ -+++.+.++. +.+...+..+ . -|+.+.
T Consensus 690 L-fngTIreNI~fg~~--~d----~e~y~~vl~a---------------------------~~L~~di~~L-P-~Gd~T~ 733 (1622)
T PLN03130 690 I-FNATVRDNILFGSP--FD----PERYERAIDV---------------------------TALQHDLDLL-P-GGDLTE 733 (1622)
T ss_pred c-CCCCHHHHHhCCCc--cc----HHHHHHHHHH---------------------------hCcHHHHHhC-C-Cccccc
Confidence 8 67899999974321 11 0222233332 2233333222 1 144434
Q ss_pred ccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHH-HHcc--CCCeEEEEecCHHHHHhhcCeEEE
Q 005532 252 DGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEG-YLGK--QDVPMVIISHDRAFLDQLCTKIVE 328 (692)
Q Consensus 252 ~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~-~L~~--~~~tvI~vsHd~~~l~~~~d~i~~ 328 (692)
.+++ ..+|||||||||+|||||+++|+|||||||||+||+++.+.+.+ .++. .++|+|+|||+++.+.. ||+|++
T Consensus 734 IGe~-G~~LSGGQKQRIaLARAly~~~~IlLLDEptSALD~~~~~~I~~~~l~~~l~~kTvIlVTH~l~~l~~-aD~Ii~ 811 (1622)
T PLN03130 734 IGER-GVNISGGQKQRVSMARAVYSNSDVYIFDDPLSALDAHVGRQVFDKCIKDELRGKTRVLVTNQLHFLSQ-VDRIIL 811 (1622)
T ss_pred ccCC-CCCCCHHHHHHHHHHHHHhCCCCEEEECCCccccCHHHHHHHHHHHhhHHhcCCEEEEEECCHhHHHh-CCEEEE
Confidence 4333 68899999999999999999999999999999999999887653 4443 47999999999998864 999999
Q ss_pred EecceEEEeccChHHHHHHHHH-------------------------------------------------------HHH
Q 005532 329 TEMGVSRTYEGNYSQYVLEKAA-------------------------------------------------------WIE 353 (692)
Q Consensus 329 l~~G~~~~~~G~y~~~~~~~~~-------------------------------------------------------~~~ 353 (692)
|++|++. ..|+|++....... ...
T Consensus 812 L~~G~i~-e~Gt~~eL~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 890 (1622)
T PLN03130 812 VHEGMIK-EEGTYEELSNNGPLFQKLMENAGKMEEYVEENGEEEDDQTSSKPVANGNANNLKKDSSSKKKSKEGKSVLIK 890 (1622)
T ss_pred EeCCEEE-EeCCHHHHHhcchhHHHHHHhcccccccccccccccccccccccccccccccccccccccccccccchhhhh
Confidence 9999873 44555433210000 000
Q ss_pred HH--------HHHHHHHHHHH------------------------HHHHHHHH---------------------------
Q 005532 354 SQ--------YAAWEKQQREI------------------------EQTKDLIN--------------------------- 374 (692)
Q Consensus 354 ~~--------~~~~~~~~~~~------------------------~~~~~~i~--------------------------- 374 (692)
.. ...|.+..+.. -++..|.+
T Consensus 891 ~e~~~~g~v~~~vy~~Y~~~~g~~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~i~~~l~~~~~i~~ 970 (1622)
T PLN03130 891 QEERETGVVSWKVLERYKNALGGAWVVMILFLCYVLTEVFRVSSSTWLSEWTDQGTPKTHGPLFYNLIYALLSFGQVLVT 970 (1622)
T ss_pred HHHHhcCccCHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCchhHHHHHHHHHHHHHHHHH
Confidence 00 00000000000 00000000
Q ss_pred ------------------------Hh-cc------CCcchhh--------------------------------------
Q 005532 375 ------------------------RL-GA------GANSGRA-------------------------------------- 385 (692)
Q Consensus 375 ------------------------~l-~~------~~~~~~~-------------------------------------- 385 (692)
.+ .. ...+|+.
T Consensus 971 ~~~~~~~~~~~~~~~~~L~~~l~~~ll~~p~~ffd~~~~G~IlnR~s~Di~~id~~l~~~~~~~~~~~~~~i~~~i~i~~ 1050 (1622)
T PLN03130 971 LLNSYWLIMSSLYAAKRLHDAMLGSILRAPMSFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFLGQIFQLLSTFVLIGI 1050 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00 00 0000000
Q ss_pred --------------------------hHHHHH------------------------------------------------
Q 005532 386 --------------------------SSAEKK------------------------------------------------ 391 (692)
Q Consensus 386 --------------------------~~~~~~------------------------------------------------ 391 (692)
....++
T Consensus 1051 ~~~~~~~~~~pl~~~~~~~~~~~~~~~r~~~r~~~~~~s~~~~~~~Etl~Gi~tIraf~~~~~f~~~~~~~~~~~~~~~~ 1130 (1622)
T PLN03130 1051 VSTISLWAIMPLLVLFYGAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMAEINGRSMDNNIRFTL 1130 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHhCCHHHHHhCcHHHHHHHHHHHHHHHHHHHHH
Confidence 000000
Q ss_pred ---------------------------------------------------------------------------HHHHH
Q 005532 392 ---------------------------------------------------------------------------LERLQ 396 (692)
Q Consensus 392 ---------------------------------------------------------------------------l~rl~ 396 (692)
++|+.
T Consensus 1131 ~~~~~~~wl~~~l~~~~~~~i~~~~~~~v~~~~~~~~~~~~~~~~G~~ls~~~~~~~~l~~l~~~~~~~e~~~~sveRi~ 1210 (1622)
T PLN03130 1131 VNMSSNRWLAIRLETLGGLMIWLTASFAVMQNGRAENQAAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVG 1210 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00000
Q ss_pred HHhhhcccccccceeeecCCCCCCCCceEEEEeEEEEcCC--eecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCC
Q 005532 397 EEEQIEKPFQRKQMKIRFPERGRSGRSVVTIKNLEFGYED--RLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLE 474 (692)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~y~~--~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~ 474 (692)
+.... +++......-..|+..|+....|+++||+++|++ .++|+|+||+|++||+|||||+||||||||+++|.|++
T Consensus 1211 e~~~~-~~E~~~~~~~~~~~~~wp~~g~I~f~nVsf~Y~~~~~~VL~~is~~I~~GekVaIVGrSGSGKSTLl~lL~rl~ 1289 (1622)
T PLN03130 1211 TYIDL-PSEAPLVIENNRPPPGWPSSGSIKFEDVVLRYRPELPPVLHGLSFEISPSEKVGIVGRTGAGKSSMLNALFRIV 1289 (1622)
T ss_pred HHhCC-CCcccccccCCCCCCCCCCCCcEEEEEEEEEeCCCCCceecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCcC
Confidence 00000 0000000000011223444557999999999964 37999999999999999999999999999999999999
Q ss_pred CCCeeEEEECCccce----------eeeecccchhhcCCCccHHHHHHHHhccccHHHHHHHHhhcCCCc------cccc
Q 005532 475 KPRGGEVLLGEHNVL----------PNYFEQNQAEALDLDKTVLETVAEAAEDWRIDDIKGLLGRCNFKA------DMLD 538 (692)
Q Consensus 475 ~p~~G~i~~~~~~~~----------~~~~~q~~~~~l~~~~tv~e~~~~~~~~~~~~~~~~~L~~~~l~~------~~~~ 538 (692)
+|++|+|.+||.++. .++++|++ .+ ++.|+++|+.... ....+++.++++..++.+ ..++
T Consensus 1290 ~p~~G~I~IDG~dI~~i~l~~LR~~IsiVpQdp--~L-F~GTIreNLd~~~-~~tdeei~~Al~~a~l~~~I~~lp~GLd 1365 (1622)
T PLN03130 1290 ELERGRILIDGCDISKFGLMDLRKVLGIIPQAP--VL-FSGTVRFNLDPFN-EHNDADLWESLERAHLKDVIRRNSLGLD 1365 (1622)
T ss_pred CCCCceEEECCEecccCCHHHHHhccEEECCCC--cc-ccccHHHHhCcCC-CCCHHHHHHHHHHcCcHHHHHhCccccC
Confidence 999999999998763 35677653 34 4679999997643 345667777777776631 1122
Q ss_pred ----ccCCCCCHHHHHHHHHHHHhccCCcEEEEeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhccEEEE
Q 005532 539 ----RKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY--KGTVITVSHDRYFVKQIVNRVVE 612 (692)
Q Consensus 539 ----~~~~~LSgGqkqrv~LAral~~~p~lLlLDEPTn~LD~~~~~~l~~~l~~~--~~tviivSHd~~~l~~~~d~i~~ 612 (692)
.....||||||||+||||||+++|+||||||||++||.++.+.|++.|++. +.|+|+|+|+++.+.+ ||+|++
T Consensus 1366 t~Vge~G~nLSgGQrQrlaLARALLr~p~ILILDEATSaLD~~Te~~Iq~~I~~~~~~~TvI~IAHRL~tI~~-~DrIlV 1444 (1622)
T PLN03130 1366 AEVSEAGENFSVGQRQLLSLARALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILV 1444 (1622)
T ss_pred ccccCCCCCCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEeCChHHHHh-CCEEEE
Confidence 234589999999999999999999999999999999999999999999865 3599999999999988 999999
Q ss_pred EECCEEEEecCChhHHHH
Q 005532 613 VKGSNLQDYAGDYNYYLE 630 (692)
Q Consensus 613 l~~g~l~~~~g~~~~~~~ 630 (692)
|++|+++++ |+.++.++
T Consensus 1445 Ld~G~IvE~-Gt~~eLl~ 1461 (1622)
T PLN03130 1445 LDAGRVVEF-DTPENLLS 1461 (1622)
T ss_pred EECCEEEEe-CCHHHHHh
Confidence 999999975 66666654
No 29
>PLN03232 ABC transporter C family member; Provisional
Probab=100.00 E-value=7.1e-69 Score=670.39 Aligned_cols=206 Identities=18% Similarity=0.355 Sum_probs=173.4
Q ss_pred CCCCceEEEEeEEEEcCC--eecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccce-------
Q 005532 419 RSGRSVVTIKNLEFGYED--RLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL------- 489 (692)
Q Consensus 419 ~~~~~~l~~~~l~~~y~~--~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~~------- 489 (692)
|+....|+++||+++|++ +++|+|+||+|++||++|||||||||||||+++|.|+++|++|+|.+||.++.
T Consensus 1229 ~p~~g~I~f~nVsf~Y~~~~~~vL~~isl~I~~GekvaIVG~SGSGKSTL~~lL~rl~~p~~G~I~IdG~di~~i~~~~l 1308 (1495)
T PLN03232 1229 WPSRGSIKFEDVHLRYRPGLPPVLHGLSFFVSPSEKVGVVGRTGAGKSSMLNALFRIVELEKGRIMIDDCDVAKFGLTDL 1308 (1495)
T ss_pred CCCCCcEEEEEEEEEECCCCCcccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCcCCCceEEECCEEhhhCCHHHH
Confidence 344456999999999953 47999999999999999999999999999999999999999999999998763
Q ss_pred ---eeeecccchhhcCCCccHHHHHHHHhccccHHHHHHHHhhcCCCc----------ccccccCCCCCHHHHHHHHHHH
Q 005532 490 ---PNYFEQNQAEALDLDKTVLETVAEAAEDWRIDDIKGLLGRCNFKA----------DMLDRKVSLLSGGEKARLAFCK 556 (692)
Q Consensus 490 ---~~~~~q~~~~~l~~~~tv~e~~~~~~~~~~~~~~~~~L~~~~l~~----------~~~~~~~~~LSgGqkqrv~LAr 556 (692)
.++++|++ .+ ++.|+++|+.... ....+++.+.++..++.+ ........+||||||||++|||
T Consensus 1309 R~~i~iVpQdp--~L-F~gTIr~NL~~~~-~~sdeei~~al~~a~l~~~I~~lp~GLdt~v~e~G~~LSgGQrQrlaLAR 1384 (1495)
T PLN03232 1309 RRVLSIIPQSP--VL-FSGTVRFNIDPFS-EHNDADLWEALERAHIKDVIDRNPFGLDAEVSEGGENFSVGQRQLLSLAR 1384 (1495)
T ss_pred HhhcEEECCCC--ee-eCccHHHHcCCCC-CCCHHHHHHHHHHcCCHHHHHhCcCCCCceecCCCCCCCHHHHHHHHHHH
Confidence 35677653 44 4579999997543 345667777777776632 1122334589999999999999
Q ss_pred HhccCCcEEEEeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhccEEEEEECCEEEEecCChhHHHH
Q 005532 557 FMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY--KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYYLE 630 (692)
Q Consensus 557 al~~~p~lLlLDEPTn~LD~~~~~~l~~~l~~~--~~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~~~~~ 630 (692)
||+++|+||||||||++||.++.+.+++.|++. +.|+|+|+|+++.+.+ ||+|++|++|+++++ |++++.++
T Consensus 1385 ALLr~~~ILILDEATSaLD~~Te~~Iq~~L~~~~~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~-Gt~~eLl~ 1458 (1495)
T PLN03232 1385 ALLRRSKILVLDEATASVDVRTDSLIQRTIREEFKSCTMLVIAHRLNTIID-CDKILVLSSGQVLEY-DSPQELLS 1458 (1495)
T ss_pred HHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHh-CCEEEEEECCEEEEE-CCHHHHHh
Confidence 999999999999999999999999999999865 3599999999999988 999999999999975 77777654
No 30
>TIGR00957 MRP_assoc_pro multi drug resistance-associated protein (MRP). This model describes multi drug resistance-associated protein (MRP) in eukaryotes. The multidrug resistance-associated protein is an integral membrane protein that causes multidrug resistance when overexpressed in mammalian cells. It belongs to ABC transporter superfamily. The protein topology and function was experimentally demonstrated by epitope tagging and immunofluorescence. Insertion of tags in the critical regions associated with drug efflux, abrogated its function. The C-terminal domain seem to highly conserved.
Probab=100.00 E-value=6.6e-68 Score=662.55 Aligned_cols=207 Identities=23% Similarity=0.426 Sum_probs=173.8
Q ss_pred CCCCCceEEEEeEEEEcCC--eecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccce------
Q 005532 418 GRSGRSVVTIKNLEFGYED--RLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL------ 489 (692)
Q Consensus 418 ~~~~~~~l~~~~l~~~y~~--~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~~------ 489 (692)
.|+....|+++||+++|++ .++|+|+||+|++||++||||++|||||||+++|.|+++|++|+|.+||.++.
T Consensus 1278 ~wp~~g~I~f~nVsf~Y~~~~~~vL~~is~~I~~GekiaIVGrTGsGKSTL~~lL~rl~~~~~G~I~IdG~dI~~i~~~~ 1357 (1522)
T TIGR00957 1278 GWPPRGRVEFRNYCLRYREDLDLVLRHINVTIHGGEKVGIVGRTGAGKSSLTLGLFRINESAEGEIIIDGLNIAKIGLHD 1357 (1522)
T ss_pred CCCCCCcEEEEEEEEEeCCCCcccccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCccCCCCeEEECCEEccccCHHH
Confidence 3455567999999999974 46999999999999999999999999999999999999999999999998763
Q ss_pred ----eeeecccchhhcCCCccHHHHHHHHhccccHHHHHHHHhhcCCCc------ccccccC----CCCCHHHHHHHHHH
Q 005532 490 ----PNYFEQNQAEALDLDKTVLETVAEAAEDWRIDDIKGLLGRCNFKA------DMLDRKV----SLLSGGEKARLAFC 555 (692)
Q Consensus 490 ----~~~~~q~~~~~l~~~~tv~e~~~~~~~~~~~~~~~~~L~~~~l~~------~~~~~~~----~~LSgGqkqrv~LA 555 (692)
.++++|++ .+ ++.|+++|+.... ....+++.++|+.+++.+ +.++..+ ..||||||||+|||
T Consensus 1358 LR~~i~iVpQdp--~L-F~gTIr~NLdp~~-~~sdeei~~al~~a~l~~~I~~lp~GLdt~v~e~G~~LSgGQrQrl~LA 1433 (1522)
T TIGR00957 1358 LRFKITIIPQDP--VL-FSGSLRMNLDPFS-QYSDEEVWWALELAHLKTFVSALPDKLDHECAEGGENLSVGQRQLVCLA 1433 (1522)
T ss_pred HHhcCeEECCCC--cc-cCccHHHHcCccc-CCCHHHHHHHHHHcCcHHHHhhCccCCCceecCCCCcCCHHHHHHHHHH
Confidence 35677653 34 4679999996432 345667777888777632 1233333 57999999999999
Q ss_pred HHhccCCcEEEEeCCCCCCCHHHHHHHHHHHHhc-C-ceEEEEecCHHHHHhhccEEEEEECCEEEEecCChhHHHH
Q 005532 556 KFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY-K-GTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYYLE 630 (692)
Q Consensus 556 ral~~~p~lLlLDEPTn~LD~~~~~~l~~~l~~~-~-~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~~~~~ 630 (692)
|||+++|+||||||||++||.++...|++.|++. . .|||+|+|+++.+.. ||+|++|++|+++++ |+.++.++
T Consensus 1434 RALLr~~~ILiLDEaTSalD~~Te~~Iq~~l~~~~~~~TvI~IAHRl~ti~~-~DrIlVld~G~IvE~-G~~~eLl~ 1508 (1522)
T TIGR00957 1434 RALLRKTKILVLDEATAAVDLETDNLIQSTIRTQFEDCTVLTIAHRLNTIMD-YTRVIVLDKGEVAEF-GAPSNLLQ 1508 (1522)
T ss_pred HHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHh-CCEEEEEECCEEEEE-CCHHHHHh
Confidence 9999999999999999999999999999999864 3 599999999999988 999999999999976 77666554
No 31
>COG3845 ABC-type uncharacterized transport systems, ATPase components [General function prediction only]
Probab=100.00 E-value=2.1e-66 Score=553.42 Aligned_cols=437 Identities=25% Similarity=0.389 Sum_probs=358.6
Q ss_pred CcEEEEeEEEEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC-----------ceEE
Q 005532 96 SGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN-----------MKIA 164 (692)
Q Consensus 96 ~~l~i~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~-----------~~i~ 164 (692)
..+++++++|.|++..++++|||+|++||++||+|+||+|||||+++|.|+++|++|+|.++|.. ..||
T Consensus 3 ~~l~~~~itK~f~~~~And~V~l~v~~GeIHaLLGENGAGKSTLm~iL~G~~~P~~GeI~v~G~~v~~~sP~dA~~~GIG 82 (501)
T COG3845 3 PALEMRGITKRFPGVVANDDVSLSVKKGEIHALLGENGAGKSTLMKILFGLYQPDSGEIRVDGKEVRIKSPRDAIRLGIG 82 (501)
T ss_pred ceEEEeccEEEcCCEEecCceeeeecCCcEEEEeccCCCCHHHHHHHHhCcccCCcceEEECCEEeccCCHHHHHHcCCc
Confidence 46999999999999999999999999999999999999999999999999999999999999853 3599
Q ss_pred EEcccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHHhh
Q 005532 165 FLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMP 244 (692)
Q Consensus 165 ~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~ 244 (692)
+|+|+|.+.++.||.|||..+.... ....++.....+++.++.+
T Consensus 83 MVhQHF~Lv~~lTV~ENiiLg~e~~------------------------------------~~~~~~~~~~~~~i~~l~~ 126 (501)
T COG3845 83 MVHQHFMLVPTLTVAENIILGLEPS------------------------------------KGGLIDRRQARARIKELSE 126 (501)
T ss_pred EEeeccccccccchhhhhhhcCccc------------------------------------cccccCHHHHHHHHHHHHH
Confidence 9999999999999999997443210 0011334456788899999
Q ss_pred hcCCCccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHH---ccCCCeEEEEecCHHHHHh
Q 005532 245 ELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYL---GKQDVPMVIISHDRAFLDQ 321 (692)
Q Consensus 245 ~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L---~~~~~tvI~vsHd~~~l~~ 321 (692)
.+||+ -+.+.++.+||-|+||||.|-+|||.+|++|||||||+.|-|...+.|+..| ++.|+|||+|||.+.++.+
T Consensus 127 ~yGl~-vdp~~~V~dLsVG~qQRVEIlKaLyr~a~iLILDEPTaVLTP~E~~~lf~~l~~l~~~G~tIi~ITHKL~Ev~~ 205 (501)
T COG3845 127 RYGLP-VDPDAKVADLSVGEQQRVEILKALYRGARLLILDEPTAVLTPQEADELFEILRRLAAEGKTIIFITHKLKEVMA 205 (501)
T ss_pred HhCCC-CCccceeecCCcchhHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeccHHHHHH
Confidence 99997 6789999999999999999999999999999999999999999999998776 4689999999999999999
Q ss_pred hcCeEEEEecceEEEeccChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchhhhHHHHHHHHHHHHhhh
Q 005532 322 LCTKIVETEMGVSRTYEGNYSQYVLEKAAWIESQYAAWEKQQREIEQTKDLINRLGAGANSGRASSAEKKLERLQEEEQI 401 (692)
Q Consensus 322 ~~d~i~~l~~G~~~~~~G~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~l~rl~~~~~~ 401 (692)
+||++.+|+.|+.. |.++.. ... . ..++.+.+.+ + .+
T Consensus 206 iaDrvTVLR~Gkvv---gt~~~~-~~~-------------t------~~ela~lMvG-----~---------------~v 242 (501)
T COG3845 206 IADRVTVLRRGKVV---GTVDPV-AET-------------T------EEELAELMVG-----R---------------EV 242 (501)
T ss_pred hhCeeEEEeCCeEE---eeecCC-CCC-------------C------HHHHHHHhcC-----C---------------cc
Confidence 99999999999863 333210 000 0 0001111111 0 00
Q ss_pred cccccccceeeecCCCCCCCCceEEEEeEEEEcCC-eecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeE
Q 005532 402 EKPFQRKQMKIRFPERGRSGRSVVTIKNLEFGYED-RLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGE 480 (692)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~y~~-~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~ 480 (692)
..+. .. .+..+++++|++++++..-.. ...+++|||+|..||++||.|-.|.|.+.|+.+|+|+.+|.+|+
T Consensus 243 ~~~~-------~~-~~~~pg~~vL~V~~L~v~~~~~~~~v~~vs~~Vr~GEIvGIAGV~GNGQ~eL~eaisGlr~~~~G~ 314 (501)
T COG3845 243 VLRV-------VK-PPSTPGEVVLEVEDLSVKDRRGVTAVKDVSFEVRAGEIVGIAGVAGNGQSELVEAISGLRKPASGR 314 (501)
T ss_pred cccc-------cc-CCCCCCCeEEEEeeeEeecCCCCceeeeeeeEEecCcEEEEEecCCCCHHHHHHHHhCCCccCCce
Confidence 0000 01 123466889999999987543 36799999999999999999999999999999999999999999
Q ss_pred EEECCccc----e--------eeeeccc-chhhcCCCccHHHHHHHHhcc-----------cc--HHHHHHHHhhcCCCc
Q 005532 481 VLLGEHNV----L--------PNYFEQN-QAEALDLDKTVLETVAEAAED-----------WR--IDDIKGLLGRCNFKA 534 (692)
Q Consensus 481 i~~~~~~~----~--------~~~~~q~-~~~~l~~~~tv~e~~~~~~~~-----------~~--~~~~~~~L~~~~l~~ 534 (692)
|.++|.++ . .+|++.+ ....+.+++|+.+|+...... |. ...+.++++.|++..
T Consensus 315 I~l~G~~v~~~~~~~~~r~~G~~~VPedR~~~Glv~~~sl~eN~vL~~~~~~~~~~~g~l~~~~i~~~a~~li~~fdVr~ 394 (501)
T COG3845 315 ILLNGKDVLGRLSPRERRRLGLAYVPEDRHGHGLVLDLSLAENLVLGRHDKKPFSRGGFLDRRAIRKFARELIEEFDVRA 394 (501)
T ss_pred EEECCEeccccCCHHHHHhcCCccCChhhccCccccCccHHHHhhhhhccccccccccccCHHHHHHHHHHHHHHcCccC
Confidence 99999876 1 2344433 245677899999998754321 11 134778899999987
Q ss_pred ccccccCCCCCHHHHHHHHHHHHhccCCcEEEEeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhccEEE
Q 005532 535 DMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVV 611 (692)
Q Consensus 535 ~~~~~~~~~LSgGqkqrv~LAral~~~p~lLlLDEPTn~LD~~~~~~l~~~l~~~---~~tviivSHd~~~l~~~~d~i~ 611 (692)
.....++.+||||++||+-+||-|.++|+|||..+||.|||..+.+.+.+.|.+. +.+|++||-|++++..+||||.
T Consensus 395 ~~~~~~a~~LSGGNqQK~IlaREl~~~p~lLI~~qPTrGLDvgA~~~I~~~l~e~r~~G~AVLLiS~dLDEil~lsDrIa 474 (501)
T COG3845 395 PSPDAPARSLSGGNQQKLILARELARRPDLLIAAQPTRGLDVGAIEFIHERLLELRDAGKAVLLISEDLDEILELSDRIA 474 (501)
T ss_pred CCCCcchhhcCCcceehhhhhhhhccCCCEEEEcCCCccccHHHHHHHHHHHHHHHhcCCEEEEEehhHHHHHHhhheee
Confidence 7778889999999999999999999999999999999999999999999988754 4599999999999999999999
Q ss_pred EEECCEEEE
Q 005532 612 EVKGSNLQD 620 (692)
Q Consensus 612 ~l~~g~l~~ 620 (692)
+|.+|++..
T Consensus 475 Vi~~Gri~~ 483 (501)
T COG3845 475 VIYEGRIVG 483 (501)
T ss_pred eeeCCceec
Confidence 999999973
No 32
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=100.00 E-value=7.3e-65 Score=629.20 Aligned_cols=203 Identities=25% Similarity=0.420 Sum_probs=172.3
Q ss_pred eEEEEeEEEEcCC---eecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCC------------------------
Q 005532 424 VVTIKNLEFGYED---RLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKP------------------------ 476 (692)
Q Consensus 424 ~l~~~~l~~~y~~---~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p------------------------ 476 (692)
-|+++||+|+|++ .++|+|+||+|++|+++||||+||||||||+++|+|+++|
T Consensus 1165 ~I~f~nVsF~Y~~~~~~~vL~~lsl~i~~G~~vAIVG~SGsGKSTl~~LL~r~ydp~~~~~~~~~~~~~~~~~~~~~~~~ 1244 (1466)
T PTZ00265 1165 KIEIMDVNFRYISRPNVPIYKDLTFSCDSKKTTAIVGETGSGKSTVMSLLMRFYDLKNDHHIVFKNEHTNDMTNEQDYQG 1244 (1466)
T ss_pred eEEEEEEEEECCCCCCCccccCeeEEEcCCCEEEEECCCCCCHHHHHHHHHHhCCCcccccccccccccccccccccccc
Confidence 5999999999973 4799999999999999999999999999999999999998
Q ss_pred ------------------------------CeeEEEECCccce----------eeeecccchhhcCCCccHHHHHHHHhc
Q 005532 477 ------------------------------RGGEVLLGEHNVL----------PNYFEQNQAEALDLDKTVLETVAEAAE 516 (692)
Q Consensus 477 ------------------------------~~G~i~~~~~~~~----------~~~~~q~~~~~l~~~~tv~e~~~~~~~ 516 (692)
++|+|.++|.++. .+|++|++ .+ ++.|++||+.....
T Consensus 1245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~idG~di~~~~~~~lR~~i~~V~Qep--~L-F~gTIreNI~~g~~ 1321 (1466)
T PTZ00265 1245 DEEQNVGMKNVNEFSLTKEGGSGEDSTVFKNSGKILLDGVDICDYNLKDLRNLFSIVSQEP--ML-FNMSIYENIKFGKE 1321 (1466)
T ss_pred ccccccccccccccccccccccccccccCCCCCeEEECCEEHHhCCHHHHHhhccEeCCCC--cc-ccccHHHHHhcCCC
Confidence 6999999998763 45777753 34 58999999998755
Q ss_pred cccHHHHHHHHhhcCCCc------ccccc----cCCCCCHHHHHHHHHHHHhccCCcEEEEeCCCCCCCHHHHHHHHHHH
Q 005532 517 DWRIDDIKGLLGRCNFKA------DMLDR----KVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAI 586 (692)
Q Consensus 517 ~~~~~~~~~~L~~~~l~~------~~~~~----~~~~LSgGqkqrv~LAral~~~p~lLlLDEPTn~LD~~~~~~l~~~l 586 (692)
....+++..+++..++.. +..+. ....||||||||++|||||+++|+||||||||++||.++.+.+++.|
T Consensus 1322 ~at~eeI~~A~k~A~l~~fI~~LP~GydT~VGe~G~~LSGGQkQRIaIARALlr~p~ILLLDEaTSaLD~~sE~~I~~~L 1401 (1466)
T PTZ00265 1322 DATREDVKRACKFAAIDEFIESLPNKYDTNVGPYGKSLSGGQKQRIAIARALLREPKILLLDEATSSLDSNSEKLIEKTI 1401 (1466)
T ss_pred CCCHHHHHHHHHHcCCHHHHHhCccccCCccCCCCCcCCHHHHHHHHHHHHHhcCCCEEEEeCcccccCHHHHHHHHHHH
Confidence 556667777777666521 11233 34579999999999999999999999999999999999999999999
Q ss_pred Hhc----CceEEEEecCHHHHHhhccEEEEEEC----CEEEEecCChhHHHH
Q 005532 587 SEY----KGTVITVSHDRYFVKQIVNRVVEVKG----SNLQDYAGDYNYYLE 630 (692)
Q Consensus 587 ~~~----~~tviivSHd~~~l~~~~d~i~~l~~----g~l~~~~g~~~~~~~ 630 (692)
.+. +.|+|+|||++..+.. ||+|++|++ |+++...|++++.+.
T Consensus 1402 ~~~~~~~~~TvIiIaHRlsti~~-aD~Ivvl~~~~~~G~iv~e~Gth~eLl~ 1452 (1466)
T PTZ00265 1402 VDIKDKADKTIITIAHRIASIKR-SDKIVVFNNPDRTGSFVQAHGTHEELLS 1452 (1466)
T ss_pred HHHhccCCCEEEEEechHHHHHh-CCEEEEEeCCCCCCCEEEEecCHHHHHh
Confidence 876 4599999999999976 999999999 887655798887754
No 33
>TIGR01271 CFTR_protein cystic fibrosis transmembrane conductor regulator (CFTR). The model describes the cystis fibrosis transmembrane conductor regulator (CFTR) in eukaryotes. The principal role of this protein is chloride ion conductance. The protein is predicted to consist of 12 transmembrane domains. Mutations or lesions in the genetic loci have been linked to the aetiology of asthma, bronchiectasis, chronic obstructive pulmonary disease etc. Disease-causing mutations have been studied by 36Cl efflux assays in vitro cell cultures and electrophysiology, all of which point to the impairment of chloride channel stability and not the biosynthetic processing per se.
Probab=100.00 E-value=7.1e-64 Score=624.56 Aligned_cols=206 Identities=22% Similarity=0.395 Sum_probs=173.1
Q ss_pred CCCCCceEEEEeEEEEcCC--eecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccce------
Q 005532 418 GRSGRSVVTIKNLEFGYED--RLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL------ 489 (692)
Q Consensus 418 ~~~~~~~l~~~~l~~~y~~--~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~~------ 489 (692)
.|+....|+++||+++|++ +++|+|+||+|++||+|||||+||||||||+++|+|+++ .+|+|.+||.++.
T Consensus 1211 ~wp~~g~I~f~nVs~~Y~~~~~~vL~~is~~I~~GekvaIvGrSGsGKSTLl~lL~rl~~-~~G~I~IdG~di~~i~~~~ 1289 (1490)
T TIGR01271 1211 CWPSGGQMDVQGLTAKYTEAGRAVLQDLSFSVEGGQRVGLLGRTGSGKSTLLSALLRLLS-TEGEIQIDGVSWNSVTLQT 1289 (1490)
T ss_pred CCCCCCeEEEEEEEEEeCCCCcceeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC-CCcEEEECCEEcccCCHHH
Confidence 3555667999999999964 679999999999999999999999999999999999997 7999999998763
Q ss_pred ----eeeecccchhhcCCCccHHHHHHHHhccccHHHHHHHHhhcCCCc------ccccccC----CCCCHHHHHHHHHH
Q 005532 490 ----PNYFEQNQAEALDLDKTVLETVAEAAEDWRIDDIKGLLGRCNFKA------DMLDRKV----SLLSGGEKARLAFC 555 (692)
Q Consensus 490 ----~~~~~q~~~~~l~~~~tv~e~~~~~~~~~~~~~~~~~L~~~~l~~------~~~~~~~----~~LSgGqkqrv~LA 555 (692)
..+++|++ .+ ++.|+++|+... .....+++..+|+.+++.. ..++..+ ..||||||||+|||
T Consensus 1290 lR~~is~IpQdp--~L-F~GTIR~NLdp~-~~~tdeei~~aL~~~~L~~~i~~lp~GLdt~v~e~G~nLSgGQrQrL~LA 1365 (1490)
T TIGR01271 1290 WRKAFGVIPQKV--FI-FSGTFRKNLDPY-EQWSDEEIWKVAEEVGLKSVIEQFPDKLDFVLVDGGYVLSNGHKQLMCLA 1365 (1490)
T ss_pred HHhceEEEeCCC--cc-CccCHHHHhCcc-cCCCHHHHHHHHHHCCCHHHHHhCccccccccccCCCcCCHHHHHHHHHH
Confidence 35667653 44 467999999643 2345677888888887732 1123333 37999999999999
Q ss_pred HHhccCCcEEEEeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhccEEEEEECCEEEEecCChhHHHH
Q 005532 556 KFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY--KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYYLE 630 (692)
Q Consensus 556 ral~~~p~lLlLDEPTn~LD~~~~~~l~~~l~~~--~~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~~~~~ 630 (692)
|||+++|+||||||||++||.++...|++.|++. +.|||+|||+++.+.. ||+|++|++|+++++ |++.+.++
T Consensus 1366 RALLr~~~ILlLDEaTS~lD~~Te~~I~~~L~~~~~~~TvI~IaHRl~ti~~-~DrIlvL~~G~ivE~-g~p~~Ll~ 1440 (1490)
T TIGR01271 1366 RSILSKAKILLLDEPSAHLDPVTLQIIRKTLKQSFSNCTVILSEHRVEALLE-CQQFLVIEGSSVKQY-DSIQKLLN 1440 (1490)
T ss_pred HHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHh-CCEEEEEECCEEEEe-CCHHHHHc
Confidence 9999999999999999999999999999999865 3599999999999987 999999999999986 66666654
No 34
>PTZ00243 ABC transporter; Provisional
Probab=100.00 E-value=5.1e-64 Score=626.21 Aligned_cols=202 Identities=21% Similarity=0.335 Sum_probs=171.8
Q ss_pred ceEEEEeEEEEcCC--eecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccce----------e
Q 005532 423 SVVTIKNLEFGYED--RLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL----------P 490 (692)
Q Consensus 423 ~~l~~~~l~~~y~~--~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~~----------~ 490 (692)
..|+++||+++|++ .++|+|+||+|++||+|||||++|||||||+++|+|+++|++|+|.+||.++. +
T Consensus 1307 G~I~f~nVsf~Y~~~~~~vL~~vsf~I~~GekVaIVGrTGSGKSTLl~lLlrl~~p~~G~I~IDG~di~~i~l~~LR~~I 1386 (1560)
T PTZ00243 1307 GSLVFEGVQMRYREGLPLVLRGVSFRIAPREKVGIVGRTGSGKSTLLLTFMRMVEVCGGEIRVNGREIGAYGLRELRRQF 1386 (1560)
T ss_pred CeEEEEEEEEEeCCCCCceeecceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEcccCCHHHHHhcc
Confidence 46999999999964 35999999999999999999999999999999999999999999999998763 3
Q ss_pred eeecccchhhcCCCccHHHHHHHHhccccHHHHHHHHhhcCCCcc------ccccc----CCCCCHHHHHHHHHHHHhcc
Q 005532 491 NYFEQNQAEALDLDKTVLETVAEAAEDWRIDDIKGLLGRCNFKAD------MLDRK----VSLLSGGEKARLAFCKFMVK 560 (692)
Q Consensus 491 ~~~~q~~~~~l~~~~tv~e~~~~~~~~~~~~~~~~~L~~~~l~~~------~~~~~----~~~LSgGqkqrv~LAral~~ 560 (692)
++++|++ .+ ++.|+++|+... .....+++..+++.+++... .++.. ..+||||||||++|||||++
T Consensus 1387 ~iVpQdp--~L-F~gTIreNIdp~-~~~sdeeI~~Al~~a~l~~~I~~lp~Gldt~vge~G~nLSgGQrQrLaLARALL~ 1462 (1560)
T PTZ00243 1387 SMIPQDP--VL-FDGTVRQNVDPF-LEASSAEVWAALELVGLRERVASESEGIDSRVLEGGSNYSVGQRQLMCMARALLK 1462 (1560)
T ss_pred eEECCCC--cc-ccccHHHHhCcc-cCCCHHHHHHHHHHCCChHHHhhCcccccccccCCcCcCCHHHHHHHHHHHHHhc
Confidence 5677653 34 467999999653 24456778888888887421 12333 35799999999999999999
Q ss_pred C-CcEEEEeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhccEEEEEECCEEEEecCChhHHHH
Q 005532 561 P-STLLVLDEPTNHLDIPSKEMLEEAISEY--KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYYLE 630 (692)
Q Consensus 561 ~-p~lLlLDEPTn~LD~~~~~~l~~~l~~~--~~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~~~~~ 630 (692)
+ |+||||||||++||.++.+.+++.|++. +.|||+|+|+++.+.. ||+|++|++|++.++ |++++.+.
T Consensus 1463 ~~~~ILlLDEATSaLD~~te~~Iq~~L~~~~~~~TvI~IAHRl~ti~~-~DrIlVLd~G~VvE~-Gt~~eLl~ 1533 (1560)
T PTZ00243 1463 KGSGFILMDEATANIDPALDRQIQATVMSAFSAYTVITIAHRLHTVAQ-YDKIIVMDHGAVAEM-GSPRELVM 1533 (1560)
T ss_pred CCCCEEEEeCCCccCCHHHHHHHHHHHHHHCCCCEEEEEeccHHHHHh-CCEEEEEECCEEEEE-CCHHHHHh
Confidence 5 8999999999999999999999999864 3599999999999987 999999999999975 77777654
No 35
>TIGR01257 rim_protein retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease.
Probab=100.00 E-value=2.3e-61 Score=597.32 Aligned_cols=202 Identities=22% Similarity=0.270 Sum_probs=175.1
Q ss_pred ceEEEEeEEEEcCC--eecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccce---------ee
Q 005532 423 SVVTIKNLEFGYED--RLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL---------PN 491 (692)
Q Consensus 423 ~~l~~~~l~~~y~~--~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~~---------~~ 491 (692)
.+|+++||++.|++ +.+++++||+|++||++||+|+||||||||+|+|+|+++|++|+|.++|.++. .+
T Consensus 1936 ~~L~v~nLsK~Y~~~~~~aL~~ISf~I~~GEi~gLLG~NGAGKTTLlkmL~Gll~ptsG~I~i~G~~i~~~~~~~r~~IG 2015 (2272)
T TIGR01257 1936 DILRLNELTKVYSGTSSPAVDRLCVGVRPGECFGLLGVNGAGKTTTFKMLTGDTTVTSGDATVAGKSILTNISDVHQNMG 2015 (2272)
T ss_pred ceEEEEEEEEEECCCCceEEEeeEEEEcCCcEEEEECCCCCcHHHHHHHHhCCCCCCccEEEECCEECcchHHHHhhhEE
Confidence 47999999999985 57999999999999999999999999999999999999999999999987652 46
Q ss_pred eecccchhhcCCCccHHHHHHHHhccc--c----HHHHHHHHhhcCCCcccccccCCCCCHHHHHHHHHHHHhccCCcEE
Q 005532 492 YFEQNQAEALDLDKTVLETVAEAAEDW--R----IDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLL 565 (692)
Q Consensus 492 ~~~q~~~~~l~~~~tv~e~~~~~~~~~--~----~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~LAral~~~p~lL 565 (692)
|.+|. ..+.+.+|+.|++....... . ...+.++|+.+++. +..++++.+|||||||||+||+||+.+|+||
T Consensus 2016 y~pQ~--~~L~~~LTv~E~L~l~a~l~g~~~~~~~~~v~~lLe~lgL~-~~~dk~~~~LSGGqKqRLslA~ALi~~P~VL 2092 (2272)
T TIGR01257 2016 YCPQF--DAIDDLLTGREHLYLYARLRGVPAEEIEKVANWSIQSLGLS-LYADRLAGTYSGGNKRKLSTAIALIGCPPLV 2092 (2272)
T ss_pred EEecc--ccCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCH-HHhcCChhhCCHHHHHHHHHHHHHhcCCCEE
Confidence 77765 35667899999987542211 1 22466789999995 5689999999999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhccEEEEEECCEEEEecCChhHH
Q 005532 566 VLDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYY 628 (692)
Q Consensus 566 lLDEPTn~LD~~~~~~l~~~l~~~---~~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~~~ 628 (692)
||||||+|||+.+++.+.+.|.+. +.|||++||++++++.+||||++|++|++.. .|+..+.
T Consensus 2093 LLDEPTsGLDp~sr~~l~~lL~~l~~~g~TIILtTH~mee~e~lcDrV~IL~~G~i~~-~Gs~q~L 2157 (2272)
T TIGR01257 2093 LLDEPTTGMDPQARRMLWNTIVSIIREGRAVVLTSHSMEECEALCTRLAIMVKGAFQC-LGTIQHL 2157 (2272)
T ss_pred EEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEE-ECCHHHH
Confidence 999999999999999999998765 4599999999999999999999999999974 4665544
No 36
>TIGR00956 3a01205 Pleiotropic Drug Resistance (PDR) Family protein.
Probab=100.00 E-value=4.1e-58 Score=568.62 Aligned_cols=197 Identities=22% Similarity=0.318 Sum_probs=166.3
Q ss_pred eEEEEeEEEEcC----CeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCC---CCeeEEEECCccce------e
Q 005532 424 VVTIKNLEFGYE----DRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEK---PRGGEVLLGEHNVL------P 490 (692)
Q Consensus 424 ~l~~~~l~~~y~----~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~---p~~G~i~~~~~~~~------~ 490 (692)
+++++||++.|+ ++.+|+|||++|++|+++||+|||||||||||++|+|+.+ |++|+|.++|.++. .
T Consensus 759 ~l~~~nl~~~~~~~~~~~~iL~~vs~~i~~Ge~~aI~G~sGaGKSTLL~~Lag~~~~g~~~~G~I~i~G~~~~~~~~~~i 838 (1394)
T TIGR00956 759 IFHWRNLTYEVKIKKEKRVILNNVDGWVKPGTLTALMGASGAGKTTLLNVLAERVTTGVITGGDRLVNGRPLDSSFQRSI 838 (1394)
T ss_pred eEEEEeeEEEecCCCCCcEeeeCCEEEEECCEEEEEECCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEECChhhhcce
Confidence 589999999995 4579999999999999999999999999999999999997 78999999997652 3
Q ss_pred eeecccchhhcCCCccHHHHHHHHhc-----ccc----HHHHHHHHhhcCCCcccccccCC----CCCHHHHHHHHHHHH
Q 005532 491 NYFEQNQAEALDLDKTVLETVAEAAE-----DWR----IDDIKGLLGRCNFKADMLDRKVS----LLSGGEKARLAFCKF 557 (692)
Q Consensus 491 ~~~~q~~~~~l~~~~tv~e~~~~~~~-----~~~----~~~~~~~L~~~~l~~~~~~~~~~----~LSgGqkqrv~LAra 557 (692)
+|+.|+. .+.+..||.|++..... ... .+.+.++++.+++. +..++.++ .|||||||||+||++
T Consensus 839 ~yv~Q~~--~~~~~~Tv~E~L~~~a~l~~~~~~~~~~~~~~v~~~l~~l~L~-~~~d~~v~~~~~~LSgGqrqRl~Ia~a 915 (1394)
T TIGR00956 839 GYVQQQD--LHLPTSTVRESLRFSAYLRQPKSVSKSEKMEYVEEVIKLLEME-SYADAVVGVPGEGLNVEQRKRLTIGVE 915 (1394)
T ss_pred eeecccc--cCCCCCCHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHcCCh-hhCCCeeCCCCCCCCHHHhhHHHHHHH
Confidence 5777652 35678999999986432 111 23477899999995 56677776 799999999999999
Q ss_pred hccCCc-EEEEeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHH-HHhhccEEEEEECC-EEEEecCC
Q 005532 558 MVKPST-LLVLDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYF-VKQIVNRVVEVKGS-NLQDYAGD 624 (692)
Q Consensus 558 l~~~p~-lLlLDEPTn~LD~~~~~~l~~~l~~~---~~tviivSHd~~~-l~~~~d~i~~l~~g-~l~~~~g~ 624 (692)
|+.+|+ ||||||||+|||..+...+.+.|++. +.|||+++|++.. +.+.||++++|++| +++ |.|+
T Consensus 916 L~~~P~~iLlLDEPTsgLD~~~~~~i~~~L~~la~~g~tvI~t~H~~~~~~~~~~D~vl~L~~GG~iv-~~G~ 987 (1394)
T TIGR00956 916 LVAKPKLLLFLDEPTSGLDSQTAWSICKLMRKLADHGQAILCTIHQPSAILFEEFDRLLLLQKGGQTV-YFGD 987 (1394)
T ss_pred HHcCCCeEEEEcCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHhcCEEEEEcCCCEEE-EECC
Confidence 999997 99999999999999999999999865 4599999999986 45679999999987 776 4454
No 37
>PLN03140 ABC transporter G family member; Provisional
Probab=100.00 E-value=8.8e-56 Score=545.97 Aligned_cols=197 Identities=20% Similarity=0.317 Sum_probs=163.9
Q ss_pred eEEEEeEEEEcC-------------CeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCC--CeeEEEECCccc
Q 005532 424 VVTIKNLEFGYE-------------DRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKP--RGGEVLLGEHNV 488 (692)
Q Consensus 424 ~l~~~~l~~~y~-------------~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p--~~G~i~~~~~~~ 488 (692)
.+.++||++.++ .+.+|+|+|++|++|+++||+|||||||||||++|+|..++ .+|+|.++|.+.
T Consensus 867 ~~~~~~v~y~v~~~~~~~~~~~~~~~~~iL~~vs~~i~~Gel~aL~G~sGaGKTTLL~~LaG~~~~g~~~G~I~inG~~~ 946 (1470)
T PLN03140 867 AMSFDDVNYFVDMPAEMKEQGVTEDRLQLLREVTGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPK 946 (1470)
T ss_pred eEEEEEEEEEEccCccccccccCcCCceEeeCcEEEEECCeEEEEECCCCCCHHHHHHHHcCCCCCCcccceEEECCccC
Confidence 488999998863 23699999999999999999999999999999999999763 789999998654
Q ss_pred e-------eeeecccchhhcCCCccHHHHHHHHhc-----ccc----HHHHHHHHhhcCCCcccccccC-----CCCCHH
Q 005532 489 L-------PNYFEQNQAEALDLDKTVLETVAEAAE-----DWR----IDDIKGLLGRCNFKADMLDRKV-----SLLSGG 547 (692)
Q Consensus 489 ~-------~~~~~q~~~~~l~~~~tv~e~~~~~~~-----~~~----~~~~~~~L~~~~l~~~~~~~~~-----~~LSgG 547 (692)
. .+|+.|+. .+.+..||.|++..... ... ...+.++++.+++. +..++.+ ..||||
T Consensus 947 ~~~~~~~~igyv~Q~d--~~~~~lTV~E~L~~~a~lr~~~~~~~~~~~~~v~~vl~~lgL~-~~~~~~vg~~~~~~LSgG 1023 (1470)
T PLN03140 947 KQETFARISGYCEQND--IHSPQVTVRESLIYSAFLRLPKEVSKEEKMMFVDEVMELVELD-NLKDAIVGLPGVTGLSTE 1023 (1470)
T ss_pred ChHHhhhheEEEcccc--ccCCCCcHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHCCCh-hHhCCccCCCCCCCcCHH
Confidence 2 36777753 45678999999976431 111 12477899999995 4566665 589999
Q ss_pred HHHHHHHHHHhccCCcEEEEeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHH-HHHhhccEEEEEEC-CEEEEec
Q 005532 548 EKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRY-FVKQIVNRVVEVKG-SNLQDYA 622 (692)
Q Consensus 548 qkqrv~LAral~~~p~lLlLDEPTn~LD~~~~~~l~~~l~~~---~~tviivSHd~~-~l~~~~d~i~~l~~-g~l~~~~ 622 (692)
|||||+||++|+.+|+||+|||||+|||..+...+.+.|++. +.|||+++|+.. .+..+||++++|++ |+++ |.
T Consensus 1024 erkRvsIa~aL~~~P~lL~LDEPTsgLD~~~a~~v~~~L~~l~~~g~tVI~t~Hq~~~~i~~~~D~vllL~~gG~~v-~~ 1102 (1470)
T PLN03140 1024 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVI-YS 1102 (1470)
T ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCCCHHHHHhCCEEEEEcCCCEEE-EE
Confidence 999999999999999999999999999999999999999875 469999999998 46788999999996 7776 55
Q ss_pred CC
Q 005532 623 GD 624 (692)
Q Consensus 623 g~ 624 (692)
|+
T Consensus 1103 G~ 1104 (1470)
T PLN03140 1103 GP 1104 (1470)
T ss_pred CC
Confidence 54
No 38
>COG1245 Predicted ATPase, RNase L inhibitor (RLI) homolog [General function prediction only]
Probab=100.00 E-value=4.1e-50 Score=421.14 Aligned_cols=434 Identities=26% Similarity=0.419 Sum_probs=283.5
Q ss_pred eEEEEeCCe-eceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCCceEEEEcccCccCCCCCHHH
Q 005532 102 NISKSYKGV-TVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSNMKIAFLSQEFEVSMSRTVRE 180 (692)
Q Consensus 102 ~ls~~y~~~-~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~~~i~~v~Q~~~~~~~~Tv~e 180 (692)
++..+|+.. ..|-.+- ...+|.++||+|+||-||||-+++|+|++.|.=|...- +.. + ++..-.+..|=.+
T Consensus 79 e~vHRYg~NgFkL~~LP-~pr~G~V~GilG~NGiGKsTalkILaGel~PNLG~~~~--pp~---w--deVi~~FrGtELq 150 (591)
T COG1245 79 EVVHRYGVNGFKLYRLP-TPRPGKVVGILGPNGIGKSTALKILAGELKPNLGRYED--PPS---W--DEVIKRFRGTELQ 150 (591)
T ss_pred cceeeccCCceEEecCC-CCCCCcEEEEEcCCCccHHHHHHHHhCccccCCCCCCC--CCC---H--HHHHHHhhhhHHH
Confidence 456778643 1222221 45689999999999999999999999999998775210 000 0 0000001111111
Q ss_pred HHHhhh-HHHHHHHHH---HHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHHhhhcCCCccccccc
Q 005532 181 EFMSAF-KEEMEIAGK---LERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFTADDGDRL 256 (692)
Q Consensus 181 ~i~~~~-~~~~~~~~~---~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl~~~~~~~~ 256 (692)
|.+... ........+ .+.+-..+.. .+.+++...+ -.-..+++.+.+++. ..++|.
T Consensus 151 ~YF~~l~~g~~r~v~K~QYVd~iPk~~KG------~v~elLk~~d-------------e~g~~devve~l~L~-nvl~r~ 210 (591)
T COG1245 151 NYFKKLYEGELRAVHKPQYVDLIPKVVKG------KVGELLKKVD-------------ERGKFDEVVERLGLE-NVLDRD 210 (591)
T ss_pred HHHHHHHcCCcceecchHHHHHHHHHhcc------hHHHHHHhhh-------------hcCcHHHHHHHhcch-hhhhhh
Confidence 111000 000000000 0000011100 1111221111 012466788889996 688999
Q ss_pred cccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHH---ccCCCeEEEEecCHHHHHhhcCeEEEEecce
Q 005532 257 VASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYL---GKQDVPMVIISHDRAFLDQLCTKIVETEMGV 333 (692)
Q Consensus 257 ~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L---~~~~~tvI~vsHd~~~l~~~~d~i~~l~~G~ 333 (692)
+.+|||||.||+|||.++++++|++++|||||.||...+-...+.+ .+.+++||+|.||+..++.++|.|.++ -|+
T Consensus 211 v~~LSGGELQr~aIaa~l~rdADvY~FDEpsSyLDi~qRl~~ar~Irel~~~~k~ViVVEHDLavLD~lsD~vhI~-YG~ 289 (591)
T COG1245 211 VSELSGGELQRVAIAAALLRDADVYFFDEPSSYLDIRQRLNAARVIRELAEDGKYVIVVEHDLAVLDYLSDFVHIL-YGE 289 (591)
T ss_pred hhhcCchHHHHHHHHHHHhccCCEEEEcCCcccccHHHHHHHHHHHHHHhccCCeEEEEechHHHHHHhhheeEEE-ecC
Confidence 9999999999999999999999999999999999998765544433 334899999999999999999988776 333
Q ss_pred EE---EeccChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchhhhHHHHHHHHHHHHhhhcccccccce
Q 005532 334 SR---TYEGNYSQYVLEKAAWIESQYAAWEKQQREIEQTKDLINRLGAGANSGRASSAEKKLERLQEEEQIEKPFQRKQM 410 (692)
Q Consensus 334 ~~---~~~G~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~l~rl~~~~~~~~~~~~~~~ 410 (692)
.. .+.-.|+. +.-|+.+-.+ .. .++ .-.+...+.
T Consensus 290 pg~YGvvs~p~sv--------------------------r~gIN~yL~G----yl----------~~E---N~R~R~~~I 326 (591)
T COG1245 290 PGVYGVVSKPKSV--------------------------RVGINEYLKG----YL----------PEE---NVRFRPEEI 326 (591)
T ss_pred CccceEeccchHH--------------------------HHHHHHHHhc----cC----------chh---cccccccce
Confidence 22 22222210 0011110000 00 000 000111122
Q ss_pred eeecCC-CCCCC-CceEEEEeEEEEcCCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccc
Q 005532 411 KIRFPE-RGRSG-RSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNV 488 (692)
Q Consensus 411 ~~~~~~-~~~~~-~~~l~~~~l~~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~ 488 (692)
.|...+ ..... ..+++..++++.||+- -|+--.=+|..||++|++||||-|||||.++|+|.++|++|. ..++
T Consensus 327 ~F~~~~~~~~~~~~~lv~y~~~~k~~g~F-~L~V~~G~i~~gEvigilGpNgiGKTTFvk~LAG~ikPdeg~----~~~~ 401 (591)
T COG1245 327 EFEEKPPRDDKARDTLVEYPDLKKTYGDF-KLEVEEGEIYDGEVIGILGPNGIGKTTFVKLLAGVIKPDEGS----EEDL 401 (591)
T ss_pred eeeccCcccccccceeeecchheeecCce-EEEecCCeeecceEEEEECCCCcchHHHHHHHhccccCCCCC----Cccc
Confidence 222211 11222 5567777888888742 233333456678999999999999999999999999999998 2345
Q ss_pred eeeeecccchhhcCCCccHHHHHHHHhcc-cc-HHHHHHHHhhcCCCcccccccCCCCCHHHHHHHHHHHHhccCCcEEE
Q 005532 489 LPNYFEQNQAEALDLDKTVLETVAEAAED-WR-IDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLV 566 (692)
Q Consensus 489 ~~~~~~q~~~~~l~~~~tv~e~~~~~~~~-~~-~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~LAral~~~p~lLl 566 (692)
+..|-+|...+ +.+.||.+.+...... +. .....+++.-+++ ...+++++..|||||.|||++|.+|.+++||.|
T Consensus 402 ~vSyKPQyI~~--~~~gtV~~~l~~~~~~~~~~s~~~~ei~~pl~l-~~i~e~~v~~LSGGELQRvaIaa~L~reADlYl 478 (591)
T COG1245 402 KVSYKPQYISP--DYDGTVEDLLRSAIRSAFGSSYFKTEIVKPLNL-EDLLERPVDELSGGELQRVAIAAALSREADLYL 478 (591)
T ss_pred eEeecceeecC--CCCCcHHHHHHHhhhhhcccchhHHhhcCccch-HHHHhcccccCCchhHHHHHHHHHhccccCEEE
Confidence 55666654432 3578998888765432 22 1224567778888 467899999999999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEEC
Q 005532 567 LDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKG 615 (692)
Q Consensus 567 LDEPTn~LD~~~~~~l~~~l~~~----~~tviivSHd~~~l~~~~d~i~~l~~ 615 (692)
||||++|||.+.+-.+...|+++ ..|.++|-||+.+++-++||++++++
T Consensus 479 lDEPSA~LDvEqR~~vakvIRR~~e~~~kta~vVdHDi~~~dyvsDr~ivF~G 531 (591)
T COG1245 479 LDEPSAYLDVEQRIIVAKVIRRFIENNEKTALVVDHDIYMIDYVSDRLIVFEG 531 (591)
T ss_pred ecCchhhccHHHHHHHHHHHHHHHhhcCceEEEEecceehhhhhhceEEEEec
Confidence 99999999999999888888865 46999999999999999999999974
No 39
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=4.3e-51 Score=394.78 Aligned_cols=209 Identities=29% Similarity=0.491 Sum_probs=183.6
Q ss_pred cEEEEeEEEEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC-----------ceEEE
Q 005532 97 GVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN-----------MKIAF 165 (692)
Q Consensus 97 ~l~i~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~-----------~~i~~ 165 (692)
+|+++|++|+||+..+|++|||+|++||+++||||+|||||||||||+|+.+|++|+|.++|.. .++|+
T Consensus 2 mi~i~~l~K~fg~~~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~~~~G~I~i~g~~~~~~~~~~~~R~~vGm 81 (240)
T COG1126 2 MIEIKNLSKSFGDKEVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEEPDSGSITVDGEDVGDKKDILKLRRKVGM 81 (240)
T ss_pred eEEEEeeeEEeCCeEEecCcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcCCCCceEEECCEeccchhhHHHHHHhcCe
Confidence 5999999999999999999999999999999999999999999999999999999999999842 26999
Q ss_pred EcccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHHhhh
Q 005532 166 LSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPE 245 (692)
Q Consensus 166 v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~ 245 (692)
|+|++++|+++||.||++.+.-. ....+..+.++++.++|+.
T Consensus 82 VFQ~fnLFPHlTvleNv~lap~~--------------------------------------v~~~~k~eA~~~A~~lL~~ 123 (240)
T COG1126 82 VFQQFNLFPHLTVLENVTLAPVK--------------------------------------VKKLSKAEAREKALELLEK 123 (240)
T ss_pred ecccccccccchHHHHHHhhhHH--------------------------------------HcCCCHHHHHHHHHHHHHH
Confidence 99999999999999999743210 0112334556778899999
Q ss_pred cCCCccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHH---HccCCCeEEEEecCHHHHHhh
Q 005532 246 LGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGY---LGKQDVPMVIISHDRAFLDQL 322 (692)
Q Consensus 246 lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~---L~~~~~tvI~vsHd~~~l~~~ 322 (692)
+|+. +..+.+|.+|||||||||||||||+.+|+++|+|||||+|||+.+..+.+. |.+.|.|+|+|||++.|+.++
T Consensus 124 VGL~-~ka~~yP~qLSGGQqQRVAIARALaM~P~vmLFDEPTSALDPElv~EVL~vm~~LA~eGmTMivVTHEM~FAr~V 202 (240)
T COG1126 124 VGLA-DKADAYPAQLSGGQQQRVAIARALAMDPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMIIVTHEMGFAREV 202 (240)
T ss_pred cCch-hhhhhCccccCcHHHHHHHHHHHHcCCCCEEeecCCcccCCHHHHHHHHHHHHHHHHcCCeEEEEechhHHHHHh
Confidence 9997 678999999999999999999999999999999999999999999888765 456899999999999999999
Q ss_pred cCeEEEEecceEEEeccChHHHH
Q 005532 323 CTKIVETEMGVSRTYEGNYSQYV 345 (692)
Q Consensus 323 ~d~i~~l~~G~~~~~~G~y~~~~ 345 (692)
+|||+.+++|++. -.|...+++
T Consensus 203 adrviFmd~G~ii-e~g~p~~~f 224 (240)
T COG1126 203 ADRVIFMDQGKII-EEGPPEEFF 224 (240)
T ss_pred hheEEEeeCCEEE-EecCHHHHh
Confidence 9999999999874 445655544
No 40
>COG0488 Uup ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]
Probab=100.00 E-value=1.5e-48 Score=436.03 Aligned_cols=222 Identities=39% Similarity=0.652 Sum_probs=195.0
Q ss_pred ceEEEEeEEEEcCCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccceeeeecccchhhcC
Q 005532 423 SVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQNQAEALD 502 (692)
Q Consensus 423 ~~l~~~~l~~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~~~~~~~q~~~~~l~ 502 (692)
.+|+++|+++.|+++++|+++||+|.+|++|||||+|||||||||++|+|...|++|+|.+.+ .+..+|+.|+. .++
T Consensus 2 ~~i~~~~ls~~~g~~~l~~~~~l~~~~G~riGLvG~NGaGKSTLLkilaG~~~~~~G~i~~~~-~~~v~~l~Q~~--~~~ 78 (530)
T COG0488 2 SMITLENLSLAYGDRPLLENVSLTLNPGERIGLVGRNGAGKSTLLKILAGELEPDSGEVTRPK-GLRVGYLSQEP--PLD 78 (530)
T ss_pred ceEEEeeeEEeeCCceeecCCcceeCCCCEEEEECCCCCCHHHHHHHHcCCCcCCCCeEeecC-CceEEEeCCCC--CcC
Confidence 469999999999999999999999999999999999999999999999999999999999974 46788998864 345
Q ss_pred CCccHHHHHHHHhc-----------------------------------ccc-HHHHHHHHhhcCCCcccccccCCCCCH
Q 005532 503 LDKTVLETVAEAAE-----------------------------------DWR-IDDIKGLLGRCNFKADMLDRKVSLLSG 546 (692)
Q Consensus 503 ~~~tv~e~~~~~~~-----------------------------------~~~-~~~~~~~L~~~~l~~~~~~~~~~~LSg 546 (692)
...|+.+.+..... .|. ..++..+|..+|++.. ++++++|||
T Consensus 79 ~~~tv~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~e~~~~~~L~gLg~~~~--~~~~~~LSG 156 (530)
T COG0488 79 PEKTVLDYVIEGFGELRELLAELEEAYALLADPDDELLAELEALLEELDGWTLEARAEEALLGLGFPDE--DRPVSSLSG 156 (530)
T ss_pred CCccHHHHHHhhhHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHhhcccchHHHHHHHHhcCCCCcc--cCchhhcCH
Confidence 56688776654211 122 1356788999999654 899999999
Q ss_pred HHHHHHHHHHHhccCCcEEEEeCCCCCCCHHHHHHHHHHHHhcCceEEEEecCHHHHHhhccEEEEEECCEEEEecCChh
Q 005532 547 GEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEYKGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYN 626 (692)
Q Consensus 547 Gqkqrv~LAral~~~p~lLlLDEPTn~LD~~~~~~l~~~l~~~~~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~ 626 (692)
|||.||+||+||+.+||||||||||||||.+++.||+++|.+|.+|||+||||++|++++|++|+.++.|++..|.|||+
T Consensus 157 G~r~Rv~LA~aL~~~pDlLLLDEPTNHLD~~~i~WLe~~L~~~~gtviiVSHDR~FLd~V~t~I~~ld~g~l~~y~Gny~ 236 (530)
T COG0488 157 GWRRRVALARALLEEPDLLLLDEPTNHLDLESIEWLEDYLKRYPGTVIVVSHDRYFLDNVATHILELDRGKLTPYKGNYS 236 (530)
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCCcccCHHHHHHHHHHHHhCCCcEEEEeCCHHHHHHHhhheEEecCCceeEecCCHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhHHHHHHHHHHHHHHHHh
Q 005532 627 YYLEKNLDAREKELEREAELEER 649 (692)
Q Consensus 627 ~~~~~~~~~~~~~~~~~~~~~~~ 649 (692)
.|.++++++.+++.+.+++++++
T Consensus 237 ~~~~~r~~~~~~~~~~~~~~~~~ 259 (530)
T COG0488 237 SYLEQKAERLRQEAAAYEKQQKE 259 (530)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999998776665555554443
No 41
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.7e-48 Score=376.81 Aligned_cols=205 Identities=28% Similarity=0.444 Sum_probs=181.5
Q ss_pred ceEEEEeEEEEcCCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccce-----------ee
Q 005532 423 SVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL-----------PN 491 (692)
Q Consensus 423 ~~l~~~~l~~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~~-----------~~ 491 (692)
++|+++||+++||+..+|++||++|.+||+++||||+|||||||||+|.|+.+|++|+|.++|.++. .+
T Consensus 1 ~mi~i~~l~K~fg~~~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~~~~G~I~i~g~~~~~~~~~~~~R~~vG 80 (240)
T COG1126 1 MMIEIKNLSKSFGDKEVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEEPDSGSITVDGEDVGDKKDILKLRRKVG 80 (240)
T ss_pred CeEEEEeeeEEeCCeEEecCcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcCCCCceEEECCEeccchhhHHHHHHhcC
Confidence 3699999999999999999999999999999999999999999999999999999999999996442 35
Q ss_pred eecccchhhcCCCccHHHHHHHHhc---cc----cHHHHHHHHhhcCCCcccccccCCCCCHHHHHHHHHHHHhccCCcE
Q 005532 492 YFEQNQAEALDLDKTVLETVAEAAE---DW----RIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTL 564 (692)
Q Consensus 492 ~~~q~~~~~l~~~~tv~e~~~~~~~---~~----~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~LAral~~~p~l 564 (692)
.++|+ .+++|.+||.+|+..+.- .+ ..+.+.++|+++|+. +..+.+|.+|||||||||||||||+.+|++
T Consensus 81 mVFQ~--fnLFPHlTvleNv~lap~~v~~~~k~eA~~~A~~lL~~VGL~-~ka~~yP~qLSGGQqQRVAIARALaM~P~v 157 (240)
T COG1126 81 MVFQQ--FNLFPHLTVLENVTLAPVKVKKLSKAEAREKALELLEKVGLA-DKADAYPAQLSGGQQQRVAIARALAMDPKV 157 (240)
T ss_pred eeccc--ccccccchHHHHHHhhhHHHcCCCHHHHHHHHHHHHHHcCch-hhhhhCccccCcHHHHHHHHHHHHcCCCCE
Confidence 66664 579999999999987632 11 234578899999995 678999999999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhccEEEEEECCEEEEecCChhHHHHH
Q 005532 565 LVLDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYYLEK 631 (692)
Q Consensus 565 LlLDEPTn~LD~~~~~~l~~~l~~~---~~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~~~~~~ 631 (692)
+|+|||||+|||+....+.+.+++. +.|+|+|||++.|+.+++|||++|++|++++. |+.+++...
T Consensus 158 mLFDEPTSALDPElv~EVL~vm~~LA~eGmTMivVTHEM~FAr~VadrviFmd~G~iie~-g~p~~~f~~ 226 (240)
T COG1126 158 MLFDEPTSALDPELVGEVLDVMKDLAEEGMTMIIVTHEMGFAREVADRVIFMDQGKIIEE-GPPEEFFDN 226 (240)
T ss_pred EeecCCcccCCHHHHHHHHHHHHHHHHcCCeEEEEechhHHHHHhhheEEEeeCCEEEEe-cCHHHHhcC
Confidence 9999999999999999999988865 45999999999999999999999999998865 466666653
No 42
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.6e-48 Score=385.55 Aligned_cols=196 Identities=30% Similarity=0.429 Sum_probs=174.1
Q ss_pred cEEEEeEEEEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCC-----CceEEEEcccCc
Q 005532 97 GVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKS-----NMKIAFLSQEFE 171 (692)
Q Consensus 97 ~l~i~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~-----~~~i~~v~Q~~~ 171 (692)
.+.++++++.|++.++|+|+||+|.+||+++||||+|||||||||+|+|+.+|++|+|.++|. ...++||+|++.
T Consensus 3 ~l~i~~v~~~f~~~~vl~~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~p~~G~V~~~g~~v~~p~~~~~~vFQ~~~ 82 (248)
T COG1116 3 LLEIEGVSKSFGGVEVLEDINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEKPTSGEVLLDGRPVTGPGPDIGYVFQEDA 82 (248)
T ss_pred eEEEEeeEEEeCceEEeccceeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCcccCCCCCCEEEEeccCc
Confidence 589999999999999999999999999999999999999999999999999999999999875 347999999999
Q ss_pred cCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHHhhhcCCCcc
Q 005532 172 VSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFTAD 251 (692)
Q Consensus 172 ~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl~~~ 251 (692)
+++..||.+|+..+.... .....+..+++.++|+.+|+. .
T Consensus 83 LlPW~Tv~~NV~l~l~~~---------------------------------------~~~~~e~~~~a~~~L~~VgL~-~ 122 (248)
T COG1116 83 LLPWLTVLDNVALGLELR---------------------------------------GKSKAEARERAKELLELVGLA-G 122 (248)
T ss_pred ccchhhHHhhheehhhcc---------------------------------------ccchHhHHHHHHHHHHHcCCc-c
Confidence 999999999996432110 012223345788899999997 6
Q ss_pred ccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHH----ccCCCeEEEEecCHHHHHhhcCeEE
Q 005532 252 DGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYL----GKQDVPMVIISHDRAFLDQLCTKIV 327 (692)
Q Consensus 252 ~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L----~~~~~tvI~vsHd~~~l~~~~d~i~ 327 (692)
..+++|.+|||||||||+|||||+.+|+||||||||++||+.|+..+.+.| ++.++|||+||||++++-.++|||+
T Consensus 123 ~~~~~P~qLSGGMrQRVaiARAL~~~P~lLLlDEPFgALDalTR~~lq~~l~~lw~~~~~TvllVTHdi~EAv~LsdRiv 202 (248)
T COG1116 123 FEDKYPHQLSGGMRQRVAIARALATRPKLLLLDEPFGALDALTREELQDELLRLWEETRKTVLLVTHDVDEAVYLADRVV 202 (248)
T ss_pred hhhcCccccChHHHHHHHHHHHHhcCCCEEEEcCCcchhhHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHhhhCEEE
Confidence 789999999999999999999999999999999999999999998877654 5678999999999999999999999
Q ss_pred EEecc
Q 005532 328 ETEMG 332 (692)
Q Consensus 328 ~l~~G 332 (692)
+|.++
T Consensus 203 vl~~~ 207 (248)
T COG1116 203 VLSNR 207 (248)
T ss_pred EecCC
Confidence 99884
No 43
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=2.8e-48 Score=382.14 Aligned_cols=204 Identities=27% Similarity=0.432 Sum_probs=183.4
Q ss_pred cEEEEeEEEEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCCc----------eEEEE
Q 005532 97 GVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSNM----------KIAFL 166 (692)
Q Consensus 97 ~l~i~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~~----------~i~~v 166 (692)
+|+++||||.|+++.+++|+||+|++||++++|||+||||||+||+|.++++|++|+|.++|.+. +||||
T Consensus 1 MI~~~nvsk~y~~~~av~~v~l~I~~gef~vliGpSGsGKTTtLkMINrLiept~G~I~i~g~~i~~~d~~~LRr~IGYv 80 (309)
T COG1125 1 MIEFENVSKRYGNKKAVDDVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIEPTSGEILIDGEDISDLDPVELRRKIGYV 80 (309)
T ss_pred CceeeeeehhcCCceeeeeeeEEecCCeEEEEECCCCCcHHHHHHHHhcccCCCCceEEECCeecccCCHHHHHHhhhhh
Confidence 48999999999999999999999999999999999999999999999999999999999998643 69999
Q ss_pred cccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHHhhhc
Q 005532 167 SQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPEL 246 (692)
Q Consensus 167 ~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~l 246 (692)
-|...+++++||.|||..... ....+....++++.++|+.+
T Consensus 81 iQqigLFPh~Tv~eNIa~VP~---------------------------------------L~~w~k~~i~~r~~ELl~lv 121 (309)
T COG1125 81 IQQIGLFPHLTVAENIATVPK---------------------------------------LLGWDKERIKKRADELLDLV 121 (309)
T ss_pred hhhcccCCCccHHHHHHhhhh---------------------------------------hcCCCHHHHHHHHHHHHHHh
Confidence 999999999999999963210 01123345678899999999
Q ss_pred CCCc-cccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHH----ccCCCeEEEEecCHHHHHh
Q 005532 247 GFTA-DDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYL----GKQDVPMVIISHDRAFLDQ 321 (692)
Q Consensus 247 gl~~-~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L----~~~~~tvI~vsHd~~~l~~ 321 (692)
|+++ ++.+|+|.+|||||+|||.+||||+.+|+|||+||||++|||.++..|.+.+ ++.++|||+||||++++.+
T Consensus 122 gL~p~~~~~RyP~eLSGGQQQRVGv~RALAadP~ilLMDEPFgALDpI~R~~lQ~e~~~lq~~l~kTivfVTHDidEA~k 201 (309)
T COG1125 122 GLDPSEYADRYPHELSGGQQQRVGVARALAADPPILLMDEPFGALDPITRKQLQEEIKELQKELGKTIVFVTHDIDEALK 201 (309)
T ss_pred CCCHHHHhhcCchhcCcchhhHHHHHHHHhcCCCeEeecCCccccChhhHHHHHHHHHHHHHHhCCEEEEEecCHHHHHh
Confidence 9986 5899999999999999999999999999999999999999999999998765 3579999999999999999
Q ss_pred hcCeEEEEecceEEEecc
Q 005532 322 LCTKIVETEMGVSRTYEG 339 (692)
Q Consensus 322 ~~d~i~~l~~G~~~~~~G 339 (692)
++|||++|+.|++..|.-
T Consensus 202 Ladri~vm~~G~i~Q~~~ 219 (309)
T COG1125 202 LADRIAVMDAGEIVQYDT 219 (309)
T ss_pred hhceEEEecCCeEEEeCC
Confidence 999999999999976643
No 44
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7e-47 Score=383.05 Aligned_cols=206 Identities=33% Similarity=0.541 Sum_probs=182.6
Q ss_pred cEEEEeEEEEeCC-----eeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC-----------
Q 005532 97 GVKLENISKSYKG-----VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN----------- 160 (692)
Q Consensus 97 ~l~i~~ls~~y~~-----~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~----------- 160 (692)
+|++++|+|.|+. .++|+||||+|++||++||||.+|+|||||+|+|.++..|++|+|.++|.+
T Consensus 1 mI~l~~vsK~~~~~~~~~~~al~~vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~PtsG~v~v~G~di~~l~~~~Lr~ 80 (339)
T COG1135 1 MIELENVSKTFGQTGTGTVTALDDVSLEIPKGEIFGIIGYSGAGKSTLLRLINLLERPTSGSVFVDGQDLTALSEAELRQ 80 (339)
T ss_pred CeEEEeeeeeeccCCCCceeeeccceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCCCCCceEEEcCEecccCChHHHHH
Confidence 4899999999976 359999999999999999999999999999999999999999999999843
Q ss_pred --ceEEEEcccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHH
Q 005532 161 --MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAK 238 (692)
Q Consensus 161 --~~i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (692)
.+||+++|++.++...||++|+...+. ....+..+.+++
T Consensus 81 ~R~~IGMIFQhFnLLssrTV~~NvA~PLe---------------------------------------iag~~k~ei~~R 121 (339)
T COG1135 81 LRQKIGMIFQHFNLLSSRTVFENVAFPLE---------------------------------------LAGVPKAEIKQR 121 (339)
T ss_pred HHhhccEEeccccccccchHHhhhhhhHh---------------------------------------hcCCCHHHHHHH
Confidence 369999999999999999999964321 011334466789
Q ss_pred HHHHhhhcCCCccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHc----cCCCeEEEEec
Q 005532 239 VSKLMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG----KQDVPMVIISH 314 (692)
Q Consensus 239 i~~ll~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~----~~~~tvI~vsH 314 (692)
+.++|+.+|++ +..+++|.+|||||||||+|||||+.+|+|||.|||||+|||++.+.+.++|+ +.|.||++|||
T Consensus 122 V~elLelVgL~-dk~~~yP~qLSGGQKQRVaIARALa~~P~iLL~DEaTSALDP~TT~sIL~LL~~In~~lglTIvlITH 200 (339)
T COG1135 122 VAELLELVGLS-DKADRYPAQLSGGQKQRVAIARALANNPKILLCDEATSALDPETTQSILELLKDINRELGLTIVLITH 200 (339)
T ss_pred HHHHHHHcCCh-hhhccCchhcCcchhhHHHHHHHHhcCCCEEEecCccccCChHHHHHHHHHHHHHHHHcCCEEEEEec
Confidence 99999999998 78899999999999999999999999999999999999999999998888874 47999999999
Q ss_pred CHHHHHhhcCeEEEEecceEEEeccChHH
Q 005532 315 DRAFLDQLCTKIVETEMGVSRTYEGNYSQ 343 (692)
Q Consensus 315 d~~~l~~~~d~i~~l~~G~~~~~~G~y~~ 343 (692)
.++.+.++|||+++|++|++. -.|...+
T Consensus 201 Em~Vvk~ic~rVavm~~G~lv-E~G~v~~ 228 (339)
T COG1135 201 EMEVVKRICDRVAVLDQGRLV-EEGTVSE 228 (339)
T ss_pred hHHHHHHHhhhheEeeCCEEE-EeccHHH
Confidence 999999999999999999984 4555433
No 45
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=1.3e-46 Score=369.15 Aligned_cols=212 Identities=24% Similarity=0.396 Sum_probs=184.2
Q ss_pred CCcEEEEeEEEEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCCc-------------
Q 005532 95 SSGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSNM------------- 161 (692)
Q Consensus 95 ~~~l~i~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~~------------- 161 (692)
.+.|++++++++||++.|++||||+|++||+++|+||+|||||||||+|.|+++|++|+|.+.|.+.
T Consensus 6 ~~~I~vr~v~~~fG~~~Ild~v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~P~~GeI~i~G~~i~~ls~~~~~~ir~ 85 (263)
T COG1127 6 EPLIEVRGVTKSFGDRVILDGVDLDVPRGEILAILGGSGSGKSTLLRLILGLLRPDKGEILIDGEDIPQLSEEELYEIRK 85 (263)
T ss_pred cceEEEeeeeeecCCEEEecCceeeecCCcEEEEECCCCcCHHHHHHHHhccCCCCCCeEEEcCcchhccCHHHHHHHHh
Confidence 5679999999999999999999999999999999999999999999999999999999999998642
Q ss_pred eEEEEcccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHH
Q 005532 162 KIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSK 241 (692)
Q Consensus 162 ~i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 241 (692)
++|+++|.-.+|.++||+||+...+.+. ..++...+++.+..
T Consensus 86 r~GvlFQ~gALFssltV~eNVafplre~--------------------------------------~~lp~~~i~~lv~~ 127 (263)
T COG1127 86 RMGVLFQQGALFSSLTVFENVAFPLREH--------------------------------------TKLPESLIRELVLM 127 (263)
T ss_pred heeEEeeccccccccchhHhhheehHhh--------------------------------------ccCCHHHHHHHHHH
Confidence 5999999999999999999996433211 11223334455556
Q ss_pred HhhhcCCCccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHc----cCCCeEEEEecCHH
Q 005532 242 LMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG----KQDVPMVIISHDRA 317 (692)
Q Consensus 242 ll~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~----~~~~tvI~vsHd~~ 317 (692)
-|+.+|+.....+..|++|||||++|++||||++.+|+||++||||+||||.+...+.++++ +.+.|+|+||||++
T Consensus 128 KL~~VGL~~~~~~~~PsELSGGM~KRvaLARAialdPell~~DEPtsGLDPI~a~~~~~LI~~L~~~lg~T~i~VTHDl~ 207 (263)
T COG1127 128 KLELVGLRGAAADLYPSELSGGMRKRVALARAIALDPELLFLDEPTSGLDPISAGVIDELIRELNDALGLTVIMVTHDLD 207 (263)
T ss_pred HHHhcCCChhhhhhCchhhcchHHHHHHHHHHHhcCCCEEEecCCCCCCCcchHHHHHHHHHHHHHhhCCEEEEEECChH
Confidence 68889998776899999999999999999999999999999999999999998777665543 46999999999999
Q ss_pred HHHhhcCeEEEEecceEEEeccChHHHH
Q 005532 318 FLDQLCTKIVETEMGVSRTYEGNYSQYV 345 (692)
Q Consensus 318 ~l~~~~d~i~~l~~G~~~~~~G~y~~~~ 345 (692)
.+..+||+|+++.+|++ .+.|.+.+..
T Consensus 208 s~~~i~Drv~~L~~gkv-~~~Gt~~el~ 234 (263)
T COG1127 208 SLLTIADRVAVLADGKV-IAEGTPEELL 234 (263)
T ss_pred HHHhhhceEEEEeCCEE-EEeCCHHHHH
Confidence 99999999999999998 6889876543
No 46
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3e-46 Score=376.80 Aligned_cols=212 Identities=27% Similarity=0.431 Sum_probs=176.6
Q ss_pred CCcEEEEeEEEEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC-------ceEEEEc
Q 005532 95 SSGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN-------MKIAFLS 167 (692)
Q Consensus 95 ~~~l~i~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~-------~~i~~v~ 167 (692)
++.|+++|+++.|++.++|+||||+|++|++++||||||||||||+|+|+|+++|++|+|.+.|.+ .+|||||
T Consensus 2 ~~~i~v~nl~v~y~~~~vl~~i~l~v~~G~~~~iiGPNGaGKSTLlK~iLGll~p~~G~i~~~g~~~~~~~~~~~IgYVP 81 (254)
T COG1121 2 MPMIEVENLTVSYGNRPVLEDISLSVEKGEITALIGPNGAGKSTLLKAILGLLKPSSGEIKIFGKPVRKRRKRLRIGYVP 81 (254)
T ss_pred CcEEEEeeeEEEECCEeeeeccEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcCCcceEEEccccccccccCCeEEEcC
Confidence 346999999999997689999999999999999999999999999999999999999999988752 4799999
Q ss_pred ccCcc--CCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHHhhh
Q 005532 168 QEFEV--SMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPE 245 (692)
Q Consensus 168 Q~~~~--~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~ 245 (692)
|...+ .+..||+|.+.++-...... +......+ .+.+.++|+.
T Consensus 82 Q~~~~d~~fP~tV~d~V~~g~~~~~g~----------------------------------~~~~~~~d-~~~v~~aL~~ 126 (254)
T COG1121 82 QKSSVDRSFPITVKDVVLLGRYGKKGW----------------------------------FRRLNKKD-KEKVDEALER 126 (254)
T ss_pred cccccCCCCCcCHHHHHHccCcccccc----------------------------------cccccHHH-HHHHHHHHHH
Confidence 96533 35679999886432111000 00011111 4678899999
Q ss_pred cCCCccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHc---cCCCeEEEEecCHHHHHhh
Q 005532 246 LGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG---KQDVPMVIISHDRAFLDQL 322 (692)
Q Consensus 246 lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~---~~~~tvI~vsHd~~~l~~~ 322 (692)
+|+. +..++++.+|||||+|||.|||||+++|++|||||||+|+|+.++..+.++|+ +.|+|||+||||+..+..+
T Consensus 127 Vgm~-~~~~r~i~~LSGGQ~QRV~lARAL~~~p~lllLDEP~~gvD~~~~~~i~~lL~~l~~eg~tIl~vtHDL~~v~~~ 205 (254)
T COG1121 127 VGME-DLRDRQIGELSGGQKQRVLLARALAQNPDLLLLDEPFTGVDVAGQKEIYDLLKELRQEGKTVLMVTHDLGLVMAY 205 (254)
T ss_pred cCch-hhhCCcccccCcHHHHHHHHHHHhccCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCcHHhHhh
Confidence 9997 78999999999999999999999999999999999999999999999888764 4599999999999999999
Q ss_pred cCeEEEEecceEEEeccChHHH
Q 005532 323 CTKIVETEMGVSRTYEGNYSQY 344 (692)
Q Consensus 323 ~d~i~~l~~G~~~~~~G~y~~~ 344 (692)
||+|+.|+... .+.|+..++
T Consensus 206 ~D~vi~Ln~~~--~~~G~~~~~ 225 (254)
T COG1121 206 FDRVICLNRHL--IASGPPEEV 225 (254)
T ss_pred CCEEEEEcCee--EeccChhhc
Confidence 99999997665 456766444
No 47
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=4e-46 Score=377.85 Aligned_cols=209 Identities=27% Similarity=0.419 Sum_probs=177.5
Q ss_pred cEEEEeEEEEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCCc----------eEEEE
Q 005532 97 GVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSNM----------KIAFL 166 (692)
Q Consensus 97 ~l~i~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~~----------~i~~v 166 (692)
.++++|++++|+++++++|+||+|++|++++|+||||||||||||+|+|+++|.+|+|.++|.+. .+||+
T Consensus 2 ~L~~~~ls~~y~~~~il~~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~p~~G~V~l~g~~i~~~~~kelAk~ia~v 81 (258)
T COG1120 2 MLEVENLSFGYGGKPILDDLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLKPKSGEVLLDGKDIASLSPKELAKKLAYV 81 (258)
T ss_pred eeEEEEEEEEECCeeEEecceEEecCCcEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCCchhhcCHHHHhhhEEEe
Confidence 48999999999999999999999999999999999999999999999999999999999998642 69999
Q ss_pred cccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHHhhhc
Q 005532 167 SQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPEL 246 (692)
Q Consensus 167 ~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~l 246 (692)
||.+...+..||+|.+..+-.+-. . + +. ....+-.+.+.+.|+.+
T Consensus 82 pQ~~~~~~~~tV~d~V~~GR~p~~--------------------~-------------~-~~-~~~~~D~~~v~~aL~~~ 126 (258)
T COG1120 82 PQSPSAPFGLTVYELVLLGRYPHL--------------------G-------------L-FG-RPSKEDEEIVEEALELL 126 (258)
T ss_pred ccCCCCCCCcEEeehHhhcCCccc--------------------c-------------c-cc-CCCHhHHHHHHHHHHHh
Confidence 999888788999998853210000 0 0 00 00111123577789999
Q ss_pred CCCccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHc----cCCCeEEEEecCHHHHHhh
Q 005532 247 GFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG----KQDVPMVIISHDRAFLDQL 322 (692)
Q Consensus 247 gl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~----~~~~tvI~vsHd~~~l~~~ 322 (692)
|+. +..+|++.+|||||||||.|||||+++|+||||||||++||....-.+.++++ +.|.|||+|+||++++.++
T Consensus 127 ~~~-~la~r~~~~LSGGerQrv~iArALaQ~~~iLLLDEPTs~LDi~~Q~evl~ll~~l~~~~~~tvv~vlHDlN~A~ry 205 (258)
T COG1120 127 GLE-HLADRPVDELSGGERQRVLIARALAQETPILLLDEPTSHLDIAHQIEVLELLRDLNREKGLTVVMVLHDLNLAARY 205 (258)
T ss_pred CcH-HHhcCcccccChhHHHHHHHHHHHhcCCCEEEeCCCccccCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHh
Confidence 996 68899999999999999999999999999999999999999999888887764 4689999999999999999
Q ss_pred cCeEEEEecceEEEeccChH
Q 005532 323 CTKIVETEMGVSRTYEGNYS 342 (692)
Q Consensus 323 ~d~i~~l~~G~~~~~~G~y~ 342 (692)
||+++.|++|++ ...|...
T Consensus 206 ad~~i~lk~G~i-~a~G~p~ 224 (258)
T COG1120 206 ADHLILLKDGKI-VAQGTPE 224 (258)
T ss_pred CCEEEEEECCeE-EeecCcc
Confidence 999999999998 4566643
No 48
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=3e-45 Score=364.58 Aligned_cols=197 Identities=28% Similarity=0.473 Sum_probs=169.0
Q ss_pred EEEEeEEEEeCC----eeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC-------------
Q 005532 98 VKLENISKSYKG----VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN------------- 160 (692)
Q Consensus 98 l~i~~ls~~y~~----~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~------------- 160 (692)
++++|+++.|+. ..+|+++||+|++||+++|+||+||||||||++|.|+..|++|.|.++|.+
T Consensus 2 i~~~~v~k~y~~~~~~~~~L~~v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~pt~G~v~i~g~d~~~l~~~~~~~~R 81 (226)
T COG1136 2 IELKNVSKIYGLGGEKVEALKDVNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDKPTSGEVLINGKDLTKLSEKELAKLR 81 (226)
T ss_pred cEEeeeEEEeccCCcceEecccceEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCceEEECCEEcCcCCHHHHHHHH
Confidence 679999999964 369999999999999999999999999999999999999999999998732
Q ss_pred -ceEEEEcccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHH
Q 005532 161 -MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKV 239 (692)
Q Consensus 161 -~~i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 239 (692)
..||||+|++.+.+++||.||+..... +. .........++
T Consensus 82 ~~~iGfvFQ~~nLl~~ltv~ENv~lpl~---------------~~------------------------~~~~~~~~~~~ 122 (226)
T COG1136 82 RKKIGFVFQNFNLLPDLTVLENVELPLL---------------IA------------------------GKSAGRRKRAA 122 (226)
T ss_pred HHhEEEECccCCCCCCCCHHHHHHhHHH---------------Hc------------------------CCChhHHHHHH
Confidence 259999999999999999999963210 00 00011234567
Q ss_pred HHHhhhcCCCccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHc----cCCCeEEEEecC
Q 005532 240 SKLMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG----KQDVPMVIISHD 315 (692)
Q Consensus 240 ~~ll~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~----~~~~tvI~vsHd 315 (692)
..+++.+|+.+...+++|.+|||||||||||||||+.+|+|||.||||.+||.++.+.+.++|+ +.|+||||||||
T Consensus 123 ~~l~~~lgl~~~~~~~~p~eLSGGqqQRVAIARAL~~~P~iilADEPTgnLD~~t~~~V~~ll~~~~~~~g~tii~VTHd 202 (226)
T COG1136 123 EELLEVLGLEDRLLKKKPSELSGGQQQRVAIARALINNPKIILADEPTGNLDSKTAKEVLELLRELNKERGKTIIMVTHD 202 (226)
T ss_pred HHHHHhcCChhhhccCCchhcCHHHHHHHHHHHHHhcCCCeEEeeCccccCChHHHHHHHHHHHHHHHhcCCEEEEEcCC
Confidence 7888999997555558899999999999999999999999999999999999999999988774 358899999999
Q ss_pred HHHHHhhcCeEEEEecceE
Q 005532 316 RAFLDQLCTKIVETEMGVS 334 (692)
Q Consensus 316 ~~~l~~~~d~i~~l~~G~~ 334 (692)
...+. .|||++.+.+|++
T Consensus 203 ~~lA~-~~dr~i~l~dG~~ 220 (226)
T COG1136 203 PELAK-YADRVIELKDGKI 220 (226)
T ss_pred HHHHH-hCCEEEEEeCCee
Confidence 98886 7999999999984
No 49
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.1e-45 Score=362.35 Aligned_cols=199 Identities=28% Similarity=0.503 Sum_probs=175.3
Q ss_pred CcEEEEeEEEEeCCee----ceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCC-----------C
Q 005532 96 SGVKLENISKSYKGVT----VLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKS-----------N 160 (692)
Q Consensus 96 ~~l~i~~ls~~y~~~~----vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~-----------~ 160 (692)
++|+++|+++.|+... ++++|||+|.+||++||||++|||||||+++|+|+.+|++|+|.++|. .
T Consensus 2 ~~l~v~nl~~~y~~~~~~~~~l~~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~p~~G~I~~~G~~~~~~~~~~~~~ 81 (252)
T COG1124 2 TLLSVRNLSIVYGGGKFAFHALNNVSLEIERGETLGIVGESGSGKSTLARLLAGLEKPSSGSILLDGKPLAPKKRAKAFY 81 (252)
T ss_pred ceEEEeceEEEecCCcchhhhhcceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCcccCccccchhhc
Confidence 4699999999998876 999999999999999999999999999999999999999999999984 2
Q ss_pred ceEEEEcccCc--cCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHH
Q 005532 161 MKIAFLSQEFE--VSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAK 238 (692)
Q Consensus 161 ~~i~~v~Q~~~--~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (692)
..|-+|+|+|. +.+..||.+-|...+. .......+++
T Consensus 82 ~~VQmVFQDp~~SLnP~~tv~~~l~Epl~-----------------------------------------~~~~~~~~~~ 120 (252)
T COG1124 82 RPVQMVFQDPYSSLNPRRTVGRILSEPLR-----------------------------------------PHGLSKSQQR 120 (252)
T ss_pred cceeEEecCCccccCcchhHHHHHhhhhc-----------------------------------------cCCccHHHHH
Confidence 35999999984 5566788876642211 0112234456
Q ss_pred HHHHhhhcCCCccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHc----cCCCeEEEEec
Q 005532 239 VSKLMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG----KQDVPMVIISH 314 (692)
Q Consensus 239 i~~ll~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~----~~~~tvI~vsH 314 (692)
+.++|+.+|+++..++|.+.+|||||+|||||||||..+|++||||||||+||+.....+.++|. +++.|+|||||
T Consensus 121 i~~~L~~VgL~~~~l~R~P~eLSGGQ~QRiaIARAL~~~PklLIlDEptSaLD~siQa~IlnlL~~l~~~~~lt~l~IsH 200 (252)
T COG1124 121 IAELLDQVGLPPSFLDRRPHELSGGQRQRIAIARALIPEPKLLILDEPTSALDVSVQAQILNLLLELKKERGLTYLFISH 200 (252)
T ss_pred HHHHHHHcCCCHHHHhcCchhcChhHHHHHHHHHHhccCCCEEEecCchhhhcHHHHHHHHHHHHHHHHhcCceEEEEeC
Confidence 88999999999999999999999999999999999999999999999999999999999988773 47899999999
Q ss_pred CHHHHHhhcCeEEEEecceEE
Q 005532 315 DRAFLDQLCTKIVETEMGVSR 335 (692)
Q Consensus 315 d~~~l~~~~d~i~~l~~G~~~ 335 (692)
|+..+.++||||++|++|.+.
T Consensus 201 dl~~v~~~cdRi~Vm~~G~iv 221 (252)
T COG1124 201 DLALVEHMCDRIAVMDNGQIV 221 (252)
T ss_pred cHHHHHHHhhheeeeeCCeEE
Confidence 999999999999999999984
No 50
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=5.8e-45 Score=358.71 Aligned_cols=203 Identities=29% Similarity=0.462 Sum_probs=182.1
Q ss_pred eEEEEeEEEEcCCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccce----------eeee
Q 005532 424 VVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL----------PNYF 493 (692)
Q Consensus 424 ~l~~~~l~~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~~----------~~~~ 493 (692)
||+++||||.|+++.+++++||+|++||+++++||+||||||+||+|.++++|++|+|.++|.++. ++|+
T Consensus 1 MI~~~nvsk~y~~~~av~~v~l~I~~gef~vliGpSGsGKTTtLkMINrLiept~G~I~i~g~~i~~~d~~~LRr~IGYv 80 (309)
T COG1125 1 MIEFENVSKRYGNKKAVDDVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIEPTSGEILIDGEDISDLDPVELRRKIGYV 80 (309)
T ss_pred CceeeeeehhcCCceeeeeeeEEecCCeEEEEECCCCCcHHHHHHHHhcccCCCCceEEECCeecccCCHHHHHHhhhhh
Confidence 589999999999999999999999999999999999999999999999999999999999998763 5677
Q ss_pred cccchhhcCCCccHHHHHHHHh--ccccH----HHHHHHHhhcCCCc-ccccccCCCCCHHHHHHHHHHHHhccCCcEEE
Q 005532 494 EQNQAEALDLDKTVLETVAEAA--EDWRI----DDIKGLLGRCNFKA-DMLDRKVSLLSGGEKARLAFCKFMVKPSTLLV 566 (692)
Q Consensus 494 ~q~~~~~l~~~~tv~e~~~~~~--~~~~~----~~~~~~L~~~~l~~-~~~~~~~~~LSgGqkqrv~LAral~~~p~lLl 566 (692)
-|. ..++|++||.+|+.... ..|.. .++.++|+.+|+++ +..+++|++|||||||||.+||||+.+|+|||
T Consensus 81 iQq--igLFPh~Tv~eNIa~VP~L~~w~k~~i~~r~~ELl~lvgL~p~~~~~RyP~eLSGGQQQRVGv~RALAadP~ilL 158 (309)
T COG1125 81 IQQ--IGLFPHLTVAENIATVPKLLGWDKERIKKRADELLDLVGLDPSEYADRYPHELSGGQQQRVGVARALAADPPILL 158 (309)
T ss_pred hhh--cccCCCccHHHHHHhhhhhcCCCHHHHHHHHHHHHHHhCCCHHHHhhcCchhcCcchhhHHHHHHHHhcCCCeEe
Confidence 664 47899999999998754 34654 35789999999975 58999999999999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHh----cCceEEEEecCHHHHHhhccEEEEEECCEEEEecCChhHHH
Q 005532 567 LDEPTNHLDIPSKEMLEEAISE----YKGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYYL 629 (692)
Q Consensus 567 LDEPTn~LD~~~~~~l~~~l~~----~~~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~~~~ 629 (692)
||||+++||+-++..|++.+.+ +++|||+||||++++.+++|||.+|++|+++.| +..++.+
T Consensus 159 MDEPFgALDpI~R~~lQ~e~~~lq~~l~kTivfVTHDidEA~kLadri~vm~~G~i~Q~-~~P~~il 224 (309)
T COG1125 159 MDEPFGALDPITRKQLQEEIKELQKELGKTIVFVTHDIDEALKLADRIAVMDAGEIVQY-DTPDEIL 224 (309)
T ss_pred ecCCccccChhhHHHHHHHHHHHHHHhCCEEEEEecCHHHHHhhhceEEEecCCeEEEe-CCHHHHH
Confidence 9999999999999999988764 577999999999999999999999999999987 4434443
No 51
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=6.3e-45 Score=382.58 Aligned_cols=202 Identities=30% Similarity=0.455 Sum_probs=179.5
Q ss_pred CcEEEEeEEEEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC--------ceEEEEc
Q 005532 96 SGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN--------MKIAFLS 167 (692)
Q Consensus 96 ~~l~i~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~--------~~i~~v~ 167 (692)
..|+++|+++.||+..+++++||+|+.||+++|+|||||||||||++|+|+++|++|+|.++|.. ..||||+
T Consensus 2 ~~i~l~~v~K~yg~~~~l~~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~~~~G~I~i~g~~vt~l~P~~R~iamVF 81 (338)
T COG3839 2 AELELKNVRKSFGSFEVLKDVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEEPTSGEILIDGRDVTDLPPEKRGIAMVF 81 (338)
T ss_pred cEEEEeeeEEEcCCceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChhHCCEEEEe
Confidence 45999999999998769999999999999999999999999999999999999999999998743 3699999
Q ss_pred ccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHHhhhcC
Q 005532 168 QEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELG 247 (692)
Q Consensus 168 Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lg 247 (692)
|++.+++++||++||..++.- ...+..+++++++++++.|+
T Consensus 82 Q~yALyPhmtV~~Niaf~Lk~---------------------------------------~~~~k~ei~~rV~eva~~L~ 122 (338)
T COG3839 82 QNYALYPHMTVYENIAFGLKL---------------------------------------RGVPKAEIDKRVKEVAKLLG 122 (338)
T ss_pred CCccccCCCcHHHHhhhhhhh---------------------------------------CCCchHHHHHHHHHHHHHcC
Confidence 999999999999999644321 11233456788999999999
Q ss_pred CCccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHH----ccCCCeEEEEecCHHHHHhhc
Q 005532 248 FTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYL----GKQDVPMVIISHDRAFLDQLC 323 (692)
Q Consensus 248 l~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L----~~~~~tvI~vsHd~~~l~~~~ 323 (692)
+. +.++|++.+|||||||||||||||+.+|+++|||||+|+||+..+..+...+ ++.+.|+|+||||..++..++
T Consensus 123 l~-~lL~r~P~~LSGGQrQRVAlaRAlVr~P~v~L~DEPlSnLDa~lR~~mr~ei~~lh~~l~~T~IYVTHDq~EAmtla 201 (338)
T COG3839 123 LE-HLLNRKPLQLSGGQRQRVALARALVRKPKVFLLDEPLSNLDAKLRVLMRSEIKKLHERLGTTTIYVTHDQVEAMTLA 201 (338)
T ss_pred Ch-hHHhcCcccCChhhHHHHHHHHHHhcCCCEEEecCchhHhhHHHHHHHHHHHHHHHHhcCCcEEEEcCCHHHHHhhC
Confidence 97 6899999999999999999999999999999999999999999887776554 457899999999999999999
Q ss_pred CeEEEEecceEEEe
Q 005532 324 TKIVETEMGVSRTY 337 (692)
Q Consensus 324 d~i~~l~~G~~~~~ 337 (692)
|+|++|++|++..+
T Consensus 202 dri~Vm~~G~i~Q~ 215 (338)
T COG3839 202 DRIVVMNDGRIQQV 215 (338)
T ss_pred CEEEEEeCCeeeec
Confidence 99999999998543
No 52
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.3e-45 Score=361.87 Aligned_cols=191 Identities=36% Similarity=0.507 Sum_probs=171.6
Q ss_pred ceEEEEeEEEEcCCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccc-----eeeeecccc
Q 005532 423 SVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNV-----LPNYFEQNQ 497 (692)
Q Consensus 423 ~~l~~~~l~~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~-----~~~~~~q~~ 497 (692)
.++.++++++.|++..+|+|+||+|.+||+++|+||+||||||||++|+|+.+|++|+|.++|..+ ..+|++|+
T Consensus 2 ~~l~i~~v~~~f~~~~vl~~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~p~~G~V~~~g~~v~~p~~~~~~vFQ~- 80 (248)
T COG1116 2 ALLEIEGVSKSFGGVEVLEDINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEKPTSGEVLLDGRPVTGPGPDIGYVFQE- 80 (248)
T ss_pred ceEEEEeeEEEeCceEEeccceeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCcccCCCCCCEEEEecc-
Confidence 358999999999999999999999999999999999999999999999999999999999998765 34677775
Q ss_pred hhhcCCCccHHHHHHHHhccc------cHHHHHHHHhhcCCCcccccccCCCCCHHHHHHHHHHHHhccCCcEEEEeCCC
Q 005532 498 AEALDLDKTVLETVAEAAEDW------RIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPT 571 (692)
Q Consensus 498 ~~~l~~~~tv~e~~~~~~~~~------~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~LAral~~~p~lLlLDEPT 571 (692)
+.+.|..||.+|+....... ..+.+.++|+.+|+. +..+++|.+|||||||||+|||||+.+|+|||||||+
T Consensus 81 -~~LlPW~Tv~~NV~l~l~~~~~~~~e~~~~a~~~L~~VgL~-~~~~~~P~qLSGGMrQRVaiARAL~~~P~lLLlDEPF 158 (248)
T COG1116 81 -DALLPWLTVLDNVALGLELRGKSKAEARERAKELLELVGLA-GFEDKYPHQLSGGMRQRVAIARALATRPKLLLLDEPF 158 (248)
T ss_pred -CcccchhhHHhhheehhhccccchHhHHHHHHHHHHHcCCc-chhhcCccccChHHHHHHHHHHHHhcCCCEEEEcCCc
Confidence 46889999999998764421 234688999999995 6789999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHh----cCceEEEEecCHHHHHhhccEEEEEECC
Q 005532 572 NHLDIPSKEMLEEAISE----YKGTVITVSHDRYFVKQIVNRVVEVKGS 616 (692)
Q Consensus 572 n~LD~~~~~~l~~~l~~----~~~tviivSHd~~~l~~~~d~i~~l~~g 616 (692)
++||.-++..|++.|.+ .+.|||+||||.+++-.++|||++|.++
T Consensus 159 gALDalTR~~lq~~l~~lw~~~~~TvllVTHdi~EAv~LsdRivvl~~~ 207 (248)
T COG1116 159 GALDALTREELQDELLRLWEETRKTVLLVTHDVDEAVYLADRVVVLSNR 207 (248)
T ss_pred chhhHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHhhhCEEEEecCC
Confidence 99999999988887754 4679999999999999999999999984
No 53
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.9e-45 Score=370.29 Aligned_cols=202 Identities=30% Similarity=0.482 Sum_probs=177.6
Q ss_pred cEEEEeEEEEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCC---C--------ceEEE
Q 005532 97 GVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKS---N--------MKIAF 165 (692)
Q Consensus 97 ~l~i~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~---~--------~~i~~ 165 (692)
+|.++|+++.|+..++++||||.|+.||++||.|||||||||||++|+|++.|++|.|.++|. + .+|||
T Consensus 2 ~i~i~~~~~~~~~~~a~~di~l~i~~Ge~vaLlGpSGaGKsTlLRiIAGLe~p~~G~I~~~~~~l~D~~~~~~~~R~VGf 81 (345)
T COG1118 2 SIRINNVKKRFGAFGALDDISLDIKSGELVALLGPSGAGKSTLLRIIAGLETPDAGRIRLNGRVLFDVSNLAVRDRKVGF 81 (345)
T ss_pred ceeehhhhhhcccccccccceeeecCCcEEEEECCCCCcHHHHHHHHhCcCCCCCceEEECCEeccchhccchhhcceeE
Confidence 489999999999999999999999999999999999999999999999999999999999875 2 36999
Q ss_pred EcccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHHhhh
Q 005532 166 LSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPE 245 (692)
Q Consensus 166 v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~ 245 (692)
|+|++.+++++||.+||..+..-. ....+...+..++.++|..
T Consensus 82 vFQ~YALF~HmtVa~NIAFGl~~~-------------------------------------~~~p~~~~~r~rv~elL~l 124 (345)
T COG1118 82 VFQHYALFPHMTVADNIAFGLKVR-------------------------------------KERPSEAEIRARVEELLRL 124 (345)
T ss_pred EEechhhcccchHHhhhhhccccc-------------------------------------ccCCChhhHHHHHHHHHHH
Confidence 999999999999999997543100 0012223456788888988
Q ss_pred cCCCccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHH----ccCCCeEEEEecCHHHHHh
Q 005532 246 LGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYL----GKQDVPMVIISHDRAFLDQ 321 (692)
Q Consensus 246 lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L----~~~~~tvI~vsHd~~~l~~ 321 (692)
+.+. ...+++|.+|||||+|||||||||+.+|++||||||+++||+..+..|..+| .+.|.|+|+||||.+++.+
T Consensus 125 vqL~-~la~ryP~QLSGGQrQRVALARALA~eP~vLLLDEPf~ALDa~vr~~lr~wLr~~~~~~~~ttvfVTHD~eea~~ 203 (345)
T COG1118 125 VQLE-GLADRYPAQLSGGQRQRVALARALAVEPKVLLLDEPFGALDAKVRKELRRWLRKLHDRLGVTTVFVTHDQEEALE 203 (345)
T ss_pred hccc-chhhcCchhcChHHHHHHHHHHHhhcCCCeEeecCCchhhhHHHHHHHHHHHHHHHHhhCceEEEEeCCHHHHHh
Confidence 8886 6889999999999999999999999999999999999999999877666655 4579999999999999999
Q ss_pred hcCeEEEEecceEEE
Q 005532 322 LCTKIVETEMGVSRT 336 (692)
Q Consensus 322 ~~d~i~~l~~G~~~~ 336 (692)
+||+|++|++|++..
T Consensus 204 ladrvvvl~~G~Ieq 218 (345)
T COG1118 204 LADRVVVLNQGRIEQ 218 (345)
T ss_pred hcceEEEecCCeeee
Confidence 999999999999843
No 54
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=4.7e-45 Score=385.54 Aligned_cols=209 Identities=29% Similarity=0.454 Sum_probs=182.3
Q ss_pred CcEEEEeEEEEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC--------ceEEEEc
Q 005532 96 SGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN--------MKIAFLS 167 (692)
Q Consensus 96 ~~l~i~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~--------~~i~~v~ 167 (692)
+.|+++|++++|++..+++|+||+|++||+++|+|||||||||||++|+|+..|++|+|.++|.+ ..||+|+
T Consensus 4 ~~l~i~~v~k~yg~~~av~~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~p~~G~I~l~G~~i~~lpp~kR~ig~VF 83 (352)
T COG3842 4 PALEIRNVSKSFGDFTAVDDISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQPSSGEILLDGEDITDVPPEKRPIGMVF 83 (352)
T ss_pred ceEEEEeeeeecCCeeEEecceeeecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChhhcccceee
Confidence 46999999999999999999999999999999999999999999999999999999999999853 3699999
Q ss_pred ccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHHhhhcC
Q 005532 168 QEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELG 247 (692)
Q Consensus 168 Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lg 247 (692)
|+..+|+++||+|||..++.-. ......++.+++.++|+.++
T Consensus 84 Q~YALFPHltV~~NVafGLk~~--------------------------------------~~~~~~~i~~rv~e~L~lV~ 125 (352)
T COG3842 84 QSYALFPHMTVEENVAFGLKVR--------------------------------------KKLKKAEIKARVEEALELVG 125 (352)
T ss_pred cCcccCCCCcHHHHhhhhhhhc--------------------------------------CCCCHHHHHHHHHHHHHHcC
Confidence 9999999999999997543200 00112235678889999999
Q ss_pred CCccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHH----ccCCCeEEEEecCHHHHHhhc
Q 005532 248 FTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYL----GKQDVPMVIISHDRAFLDQLC 323 (692)
Q Consensus 248 l~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L----~~~~~tvI~vsHd~~~l~~~~ 323 (692)
+. ...+|++.+|||||||||||||||+.+|++||||||+|+||..-++.+...| ++.|+|+|+||||.+++..++
T Consensus 126 L~-~~~~R~p~qLSGGQqQRVALARAL~~~P~vLLLDEPlSaLD~kLR~~mr~Elk~lq~~~giT~i~VTHDqeEAl~ms 204 (352)
T COG3842 126 LE-GFADRKPHQLSGGQQQRVALARALVPEPKVLLLDEPLSALDAKLREQMRKELKELQRELGITFVYVTHDQEEALAMS 204 (352)
T ss_pred ch-hhhhhChhhhChHHHHHHHHHHHhhcCcchhhhcCcccchhHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHhhhc
Confidence 97 5889999999999999999999999999999999999999999988876544 467999999999999999999
Q ss_pred CeEEEEecceEEEeccChHHH
Q 005532 324 TKIVETEMGVSRTYEGNYSQY 344 (692)
Q Consensus 324 d~i~~l~~G~~~~~~G~y~~~ 344 (692)
|+|++|++|++. -.|...+.
T Consensus 205 DrI~Vm~~G~I~-Q~gtP~ei 224 (352)
T COG3842 205 DRIAVMNDGRIE-QVGTPEEI 224 (352)
T ss_pred cceEEccCCcee-ecCCHHHH
Confidence 999999999984 34554433
No 55
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.3e-44 Score=363.16 Aligned_cols=205 Identities=31% Similarity=0.519 Sum_probs=180.2
Q ss_pred ceEEEEeEEEEcCCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCcc-------ceeeeecc
Q 005532 423 SVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHN-------VLPNYFEQ 495 (692)
Q Consensus 423 ~~l~~~~l~~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~-------~~~~~~~q 495 (692)
++|+++|+++.|+++++|+||||+|++|++++|+||||||||||+|+|+|+++|.+|+|.+.|.+ ..++|++|
T Consensus 3 ~~i~v~nl~v~y~~~~vl~~i~l~v~~G~~~~iiGPNGaGKSTLlK~iLGll~p~~G~i~~~g~~~~~~~~~~~IgYVPQ 82 (254)
T COG1121 3 PMIEVENLTVSYGNRPVLEDISLSVEKGEITALIGPNGAGKSTLLKAILGLLKPSSGEIKIFGKPVRKRRKRLRIGYVPQ 82 (254)
T ss_pred cEEEEeeeEEEECCEeeeeccEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcCCcceEEEccccccccccCCeEEEcCc
Confidence 56999999999996689999999999999999999999999999999999999999999998764 35789999
Q ss_pred cchhhcCCCccHHHHHHHHhcc---c-------cHHHHHHHHhhcCCCcccccccCCCCCHHHHHHHHHHHHhccCCcEE
Q 005532 496 NQAEALDLDKTVLETVAEAAED---W-------RIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLL 565 (692)
Q Consensus 496 ~~~~~l~~~~tv~e~~~~~~~~---~-------~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~LAral~~~p~lL 565 (692)
.......+..||.|.+...... | +.+.+.++|+++|+. +..++++++|||||+|||.|||||+++|+||
T Consensus 83 ~~~~d~~fP~tV~d~V~~g~~~~~g~~~~~~~~d~~~v~~aL~~Vgm~-~~~~r~i~~LSGGQ~QRV~lARAL~~~p~ll 161 (254)
T COG1121 83 KSSVDRSFPITVKDVVLLGRYGKKGWFRRLNKKDKEKVDEALERVGME-DLRDRQIGELSGGQKQRVLLARALAQNPDLL 161 (254)
T ss_pred ccccCCCCCcCHHHHHHccCcccccccccccHHHHHHHHHHHHHcCch-hhhCCcccccCcHHHHHHHHHHHhccCCCEE
Confidence 7655666789999999875211 1 135689999999995 7899999999999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhccEEEEEECCEEEEecCChhHHHH
Q 005532 566 VLDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYYLE 630 (692)
Q Consensus 566 lLDEPTn~LD~~~~~~l~~~l~~~---~~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~~~~~ 630 (692)
||||||+++|+.++..++++|.++ +.|||+||||+..+..+||+|+.|++.-+ +.|+.+++.+
T Consensus 162 lLDEP~~gvD~~~~~~i~~lL~~l~~eg~tIl~vtHDL~~v~~~~D~vi~Ln~~~~--~~G~~~~~~~ 227 (254)
T COG1121 162 LLDEPFTGVDVAGQKEIYDLLKELRQEGKTVLMVTHDLGLVMAYFDRVICLNRHLI--ASGPPEEVLT 227 (254)
T ss_pred EecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCcHHhHhhCCEEEEEcCeeE--eccChhhccC
Confidence 999999999999999999999865 45999999999999999999999976544 3577666654
No 56
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=1.9e-44 Score=365.70 Aligned_cols=202 Identities=32% Similarity=0.515 Sum_probs=178.2
Q ss_pred eEEEEeEEEEcCCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccce----------eeee
Q 005532 424 VVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL----------PNYF 493 (692)
Q Consensus 424 ~l~~~~l~~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~~----------~~~~ 493 (692)
+++++|++++|+++++++|+||+|++|++++|+||||||||||||+|+|+++|.+|+|.++|.++. .+|+
T Consensus 2 ~L~~~~ls~~y~~~~il~~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~p~~G~V~l~g~~i~~~~~kelAk~ia~v 81 (258)
T COG1120 2 MLEVENLSFGYGGKPILDDLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLKPKSGEVLLDGKDIASLSPKELAKKLAYV 81 (258)
T ss_pred eeEEEEEEEEECCeeEEecceEEecCCcEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCCchhhcCHHHHhhhEEEe
Confidence 589999999999999999999999999999999999999999999999999999999999998762 4688
Q ss_pred cccchhhcCCCccHHHHHHHHhc-------cccH---HHHHHHHhhcCCCcccccccCCCCCHHHHHHHHHHHHhccCCc
Q 005532 494 EQNQAEALDLDKTVLETVAEAAE-------DWRI---DDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPST 563 (692)
Q Consensus 494 ~q~~~~~l~~~~tv~e~~~~~~~-------~~~~---~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~LAral~~~p~ 563 (692)
+|.. ...+..||.|.+..... .|.. +.+...|+.+|+ .+..++++.+|||||||||.|||||+++|+
T Consensus 82 pQ~~--~~~~~~tV~d~V~~GR~p~~~~~~~~~~~D~~~v~~aL~~~~~-~~la~r~~~~LSGGerQrv~iArALaQ~~~ 158 (258)
T COG1120 82 PQSP--SAPFGLTVYELVLLGRYPHLGLFGRPSKEDEEIVEEALELLGL-EHLADRPVDELSGGERQRVLIARALAQETP 158 (258)
T ss_pred ccCC--CCCCCcEEeehHhhcCCcccccccCCCHhHHHHHHHHHHHhCc-HHHhcCcccccChhHHHHHHHHHHHhcCCC
Confidence 8764 45568899999886532 1222 247788999999 478899999999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHhcC----ceEEEEecCHHHHHhhccEEEEEECCEEEEecCChhHHH
Q 005532 564 LLVLDEPTNHLDIPSKEMLEEAISEYK----GTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYYL 629 (692)
Q Consensus 564 lLlLDEPTn~LD~~~~~~l~~~l~~~~----~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~~~~ 629 (692)
||||||||++||+.+.-.+.+.++++. .|||+|+||++++.++||+++.|++|+++.. |.-.+.+
T Consensus 159 iLLLDEPTs~LDi~~Q~evl~ll~~l~~~~~~tvv~vlHDlN~A~ryad~~i~lk~G~i~a~-G~p~evl 227 (258)
T COG1120 159 ILLLDEPTSHLDIAHQIEVLELLRDLNREKGLTVVMVLHDLNLAARYADHLILLKDGKIVAQ-GTPEEVL 227 (258)
T ss_pred EEEeCCCccccCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEEee-cCcchhc
Confidence 999999999999999999999998663 5999999999999999999999999999964 5544443
No 57
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.6e-44 Score=350.91 Aligned_cols=215 Identities=25% Similarity=0.417 Sum_probs=180.6
Q ss_pred CcEEEEeEEEEe-CCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC-------------c
Q 005532 96 SGVKLENISKSY-KGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN-------------M 161 (692)
Q Consensus 96 ~~l~i~~ls~~y-~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~-------------~ 161 (692)
.+|+++|+++.| +++.+|+||||+|++||+++|||++|||||||||+|.|+.+|++|+|.++|.. .
T Consensus 2 ~~i~~~nl~k~yp~~~~aL~~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d~t~G~i~~~g~~i~~~~~k~lr~~r~ 81 (258)
T COG3638 2 MMIEVKNLSKTYPGGHQALKDVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVDPTSGEILFNGVQITKLKGKELRKLRR 81 (258)
T ss_pred ceEEEeeeeeecCCCceeeeeEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccCCCcceEEecccchhccchHHHHHHHH
Confidence 469999999999 66789999999999999999999999999999999999999999999998742 2
Q ss_pred eEEEEcccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHH
Q 005532 162 KIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSK 241 (692)
Q Consensus 162 ~i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 241 (692)
.|||++|.|.+.+..+|.+|++.+.-... .+...+ -.+...+-...+-+
T Consensus 82 ~iGmIfQ~~nLv~r~sv~~NVl~grl~~~--------------------s~~~sl-----------fglfsk~dk~~Al~ 130 (258)
T COG3638 82 DIGMIFQQFNLVPRLSVLENVLLGRLGYT--------------------STWRSL-----------FGLFSKEDKAQALD 130 (258)
T ss_pred hceeEeccCCcccccHHHHHHHhhhcccc--------------------hHHHHH-----------hCCCCHHHHHHHHH
Confidence 59999999999999999999974321100 000000 01111222345667
Q ss_pred HhhhcCCCccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHc----cCCCeEEEEecCHH
Q 005532 242 LMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG----KQDVPMVIISHDRA 317 (692)
Q Consensus 242 ll~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~----~~~~tvI~vsHd~~ 317 (692)
.|+.+|+. +....+..+|||||+|||+|||||+++|+|+|.|||+++|||.+.+.+.++|+ +.|.|||+..|+++
T Consensus 131 aLervgi~-~~A~qra~~LSGGQQQRVaIARaL~Q~pkiILADEPvasLDp~~a~~Vm~~l~~in~~~g~Tvi~nLH~vd 209 (258)
T COG3638 131 ALERVGIL-DKAYQRASTLSGGQQQRVAIARALVQQPKIILADEPVASLDPESAKKVMDILKDINQEDGITVIVNLHQVD 209 (258)
T ss_pred HHHHcCcH-HHHHHHhccCCcchhHHHHHHHHHhcCCCEEecCCcccccChhhHHHHHHHHHHHHHHcCCEEEEEechHH
Confidence 89999997 45566689999999999999999999999999999999999999999988875 47999999999999
Q ss_pred HHHhhcCeEEEEecceEEEeccChHH
Q 005532 318 FLDQLCTKIVETEMGVSRTYEGNYSQ 343 (692)
Q Consensus 318 ~l~~~~d~i~~l~~G~~~~~~G~y~~ 343 (692)
.+.++|+||+-|++|++ .|+|..++
T Consensus 210 lA~~Y~~Riigl~~G~i-vfDg~~~e 234 (258)
T COG3638 210 LAKKYADRIIGLKAGRI-VFDGPASE 234 (258)
T ss_pred HHHHHHhhheEecCCcE-EEeCChhh
Confidence 99999999999999998 79998654
No 58
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.8e-44 Score=353.43 Aligned_cols=199 Identities=30% Similarity=0.503 Sum_probs=180.3
Q ss_pred ceEEEEeEEEEcCCee----cccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccce---------
Q 005532 423 SVVTIKNLEFGYEDRL----LFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL--------- 489 (692)
Q Consensus 423 ~~l~~~~l~~~y~~~~----~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~~--------- 489 (692)
++|+++|+++.|+.+. ++++|||+|.+||++||+|++|||||||.++|+|+.+|++|+|.++|..+.
T Consensus 2 ~~l~v~nl~~~y~~~~~~~~~l~~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~p~~G~I~~~G~~~~~~~~~~~~~ 81 (252)
T COG1124 2 TLLSVRNLSIVYGGGKFAFHALNNVSLEIERGETLGIVGESGSGKSTLARLLAGLEKPSSGSILLDGKPLAPKKRAKAFY 81 (252)
T ss_pred ceEEEeceEEEecCCcchhhhhcceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCcccCccccchhhc
Confidence 5799999999999776 999999999999999999999999999999999999999999999996542
Q ss_pred --eeeecccchhhcCCCccHHHHHHHHhcc----ccHHHHHHHHhhcCCCcccccccCCCCCHHHHHHHHHHHHhccCCc
Q 005532 490 --PNYFEQNQAEALDLDKTVLETVAEAAED----WRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPST 563 (692)
Q Consensus 490 --~~~~~q~~~~~l~~~~tv~e~~~~~~~~----~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~LAral~~~p~ 563 (692)
.++++|++...+.|..||.+.+.+.... ....++.++|+.+|++...+++++.+|||||+|||||||||..+|+
T Consensus 82 ~~VQmVFQDp~~SLnP~~tv~~~l~Epl~~~~~~~~~~~i~~~L~~VgL~~~~l~R~P~eLSGGQ~QRiaIARAL~~~Pk 161 (252)
T COG1124 82 RPVQMVFQDPYSSLNPRRTVGRILSEPLRPHGLSKSQQRIAELLDQVGLPPSFLDRRPHELSGGQRQRIAIARALIPEPK 161 (252)
T ss_pred cceeEEecCCccccCcchhHHHHHhhhhccCCccHHHHHHHHHHHHcCCCHHHHhcCchhcChhHHHHHHHHHHhccCCC
Confidence 2467888888899999999998876542 1234588999999999999999999999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHh----cCceEEEEecCHHHHHhhccEEEEEECCEEEEe
Q 005532 564 LLVLDEPTNHLDIPSKEMLEEAISE----YKGTVITVSHDRYFVKQIVNRVVEVKGSNLQDY 621 (692)
Q Consensus 564 lLlLDEPTn~LD~~~~~~l~~~l~~----~~~tviivSHd~~~l~~~~d~i~~l~~g~l~~~ 621 (692)
+|||||||++||......+.++|.+ ++-|+|+||||+..+..+||||++|++|.+++.
T Consensus 162 lLIlDEptSaLD~siQa~IlnlL~~l~~~~~lt~l~IsHdl~~v~~~cdRi~Vm~~G~ivE~ 223 (252)
T COG1124 162 LLILDEPTSALDVSVQAQILNLLLELKKERGLTYLFISHDLALVEHMCDRIAVMDNGQIVEI 223 (252)
T ss_pred EEEecCchhhhcHHHHHHHHHHHHHHHHhcCceEEEEeCcHHHHHHHhhheeeeeCCeEEEe
Confidence 9999999999999999999998864 455999999999999999999999999999874
No 59
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=3.6e-44 Score=339.20 Aligned_cols=202 Identities=28% Similarity=0.475 Sum_probs=177.9
Q ss_pred cEEEEeEEEEeCCee-ceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC-------------ce
Q 005532 97 GVKLENISKSYKGVT-VLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN-------------MK 162 (692)
Q Consensus 97 ~l~i~~ls~~y~~~~-vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~-------------~~ 162 (692)
+|+++||++.|++.+ +|+||||+|++||++.|+||+|||||||||+|.+...|++|+|.++|.+ .+
T Consensus 1 mI~f~~V~k~Y~~g~~aL~~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~pt~G~i~~~~~dl~~l~~~~iP~LRR~ 80 (223)
T COG2884 1 MIRFENVSKAYPGGREALRDVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEERPTRGKILVNGHDLSRLKGREIPFLRRQ 80 (223)
T ss_pred CeeehhhhhhcCCCchhhhCceEeecCceEEEEECCCCCCHHHHHHHHHhhhcCCCceEEECCeecccccccccchhhhe
Confidence 489999999997655 9999999999999999999999999999999999999999999998743 36
Q ss_pred EEEEcccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHH
Q 005532 163 IAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKL 242 (692)
Q Consensus 163 i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l 242 (692)
||+|+|++.+.++.||+||+..++. + ......++.+++.++
T Consensus 81 IGvVFQD~rLL~~~tvyeNVA~pL~----v-----------------------------------~G~~~~~i~~rV~~~ 121 (223)
T COG2884 81 IGVVFQDFRLLPDRTVYENVALPLR----V-----------------------------------IGKPPREIRRRVSEV 121 (223)
T ss_pred eeeEeeeccccccchHhhhhhhhhh----c-----------------------------------cCCCHHHHHHHHHHH
Confidence 9999999999999999999864321 0 012334567888899
Q ss_pred hhhcCCCccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHH---ccCCCeEEEEecCHHHH
Q 005532 243 MPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYL---GKQDVPMVIISHDRAFL 319 (692)
Q Consensus 243 l~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L---~~~~~tvI~vsHd~~~l 319 (692)
|+.+|+. +..+..|.+|||||||||+||||++.+|++||.||||-+|||.....+.+++ ...|.||||+|||.+.+
T Consensus 122 L~~VgL~-~k~~~lP~~LSGGEQQRvaIARAiV~~P~vLlADEPTGNLDp~~s~~im~lfeeinr~GtTVl~ATHd~~lv 200 (223)
T COG2884 122 LDLVGLK-HKARALPSQLSGGEQQRVAIARAIVNQPAVLLADEPTGNLDPDLSWEIMRLFEEINRLGTTVLMATHDLELV 200 (223)
T ss_pred HHHhccc-hhhhcCccccCchHHHHHHHHHHHccCCCeEeecCCCCCCChHHHHHHHHHHHHHhhcCcEEEEEeccHHHH
Confidence 9999997 4667778999999999999999999999999999999999999988887765 45799999999999999
Q ss_pred HhhcCeEEEEecceEEEec
Q 005532 320 DQLCTKIVETEMGVSRTYE 338 (692)
Q Consensus 320 ~~~~d~i~~l~~G~~~~~~ 338 (692)
+++-.+++.+++|.+..+.
T Consensus 201 ~~~~~rvl~l~~Grl~~d~ 219 (223)
T COG2884 201 NRMRHRVLALEDGRLVRDE 219 (223)
T ss_pred HhccCcEEEEeCCEEEecc
Confidence 9999999999999986554
No 60
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.6e-43 Score=362.77 Aligned_cols=206 Identities=29% Similarity=0.435 Sum_probs=174.5
Q ss_pred EEEEeEEEEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC-------------ceEE
Q 005532 98 VKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN-------------MKIA 164 (692)
Q Consensus 98 l~i~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~-------------~~i~ 164 (692)
|+++|++++|+++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.+ ..|+
T Consensus 1 l~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~~~i~ 80 (235)
T cd03261 1 IELRGLTKSFGGRTVLKGVDLDVRRGEILAIIGPSGSGKSTLLRLIVGLLRPDSGEVLIDGEDISGLSEAELYRLRRRMG 80 (235)
T ss_pred CeEEEEEEEECCEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccChhhHHHHhcceE
Confidence 468999999998889999999999999999999999999999999999999999999998632 2499
Q ss_pred EEcccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHHhh
Q 005532 165 FLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMP 244 (692)
Q Consensus 165 ~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~ 244 (692)
|++|++.+++..||.+|+...... . ..........++.++++
T Consensus 81 ~v~q~~~~~~~~tv~~~l~~~~~~---------------~-----------------------~~~~~~~~~~~~~~~l~ 122 (235)
T cd03261 81 MLFQSGALFDSLTVFENVAFPLRE---------------H-----------------------TRLSEEEIREIVLEKLE 122 (235)
T ss_pred EEccCcccCCCCcHHHHHHHHHhh---------------c-----------------------cCCCHHHHHHHHHHHHH
Confidence 999999887888999998532100 0 00011122345667888
Q ss_pred hcCCCccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc----CCCeEEEEecCHHHHH
Q 005532 245 ELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVIISHDRAFLD 320 (692)
Q Consensus 245 ~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~----~~~tvI~vsHd~~~l~ 320 (692)
.+|+. ...++++.+|||||||||+|||||+.+|+||||||||++||+.+++++.++|++ .++|||+||||++++.
T Consensus 123 ~~~l~-~~~~~~~~~LSgG~~qrv~ia~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsH~~~~~~ 201 (235)
T cd03261 123 AVGLR-GAEDLYPAELSGGMKKRVALARALALDPELLLYDEPTAGLDPIASGVIDDLIRSLKKELGLTSIMVTHDLDTAF 201 (235)
T ss_pred HcCCc-hhhcCChhhCCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHH
Confidence 89996 456889999999999999999999999999999999999999999999888754 4889999999999999
Q ss_pred hhcCeEEEEecceEEEeccChHH
Q 005532 321 QLCTKIVETEMGVSRTYEGNYSQ 343 (692)
Q Consensus 321 ~~~d~i~~l~~G~~~~~~G~y~~ 343 (692)
.+||+|+++++|++ .+.|...+
T Consensus 202 ~~~d~v~~l~~G~i-~~~g~~~~ 223 (235)
T cd03261 202 AIADRIAVLYDGKI-VAEGTPEE 223 (235)
T ss_pred HhcCEEEEEECCeE-EEecCHHH
Confidence 99999999999998 46676544
No 61
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=1.7e-43 Score=375.69 Aligned_cols=207 Identities=28% Similarity=0.443 Sum_probs=178.6
Q ss_pred CcEEEEeEEEEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC---------ceEEEE
Q 005532 96 SGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN---------MKIAFL 166 (692)
Q Consensus 96 ~~l~i~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~---------~~i~~v 166 (692)
.+|+++|++|+|++..+|+||||+|++|+++||+||||||||||+++|+|+++|++|+|.++|.+ ..|||+
T Consensus 6 ~~i~i~~l~k~~~~~~~l~~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~p~~G~v~i~G~~~~~~~~~~~~~ig~v 85 (306)
T PRK13537 6 APIDFRNVEKRYGDKLVVDGLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTHPDAGSISLCGEPVPSRARHARQRVGVV 85 (306)
T ss_pred ceEEEEeEEEEECCeEEEecceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEecccchHHHHhcEEEE
Confidence 46999999999998889999999999999999999999999999999999999999999998743 359999
Q ss_pred cccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHHhhhc
Q 005532 167 SQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPEL 246 (692)
Q Consensus 167 ~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~l 246 (692)
+|++.+++..|++||+... .. +. ..+......++.++++.+
T Consensus 86 ~q~~~~~~~~tv~e~l~~~-~~--------------~~------------------------~~~~~~~~~~~~~~l~~~ 126 (306)
T PRK13537 86 PQFDNLDPDFTVRENLLVF-GR--------------YF------------------------GLSAAAARALVPPLLEFA 126 (306)
T ss_pred eccCcCCCCCcHHHHHHHH-HH--------------Hc------------------------CCCHHHHHHHHHHHHHHc
Confidence 9999988889999998521 00 00 011122334566788888
Q ss_pred CCCccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc---CCCeEEEEecCHHHHHhhc
Q 005532 247 GFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK---QDVPMVIISHDRAFLDQLC 323 (692)
Q Consensus 247 gl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~---~~~tvI~vsHd~~~l~~~~ 323 (692)
|+. ...++++.+|||||||||+||+||+.+|++|||||||+|||+.++.++.++|++ .|+|||++||+++++..+|
T Consensus 127 ~l~-~~~~~~~~~LS~G~~qrl~la~aL~~~P~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~till~sH~l~e~~~~~ 205 (306)
T PRK13537 127 KLE-NKADAKVGELSGGMKRRLTLARALVNDPDVLVLDEPTTGLDPQARHLMWERLRSLLARGKTILLTTHFMEEAERLC 205 (306)
T ss_pred CCc-hHhcCchhhCCHHHHHHHHHHHHHhCCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhC
Confidence 986 567889999999999999999999999999999999999999999999887753 5899999999999999999
Q ss_pred CeEEEEecceEEEeccChHH
Q 005532 324 TKIVETEMGVSRTYEGNYSQ 343 (692)
Q Consensus 324 d~i~~l~~G~~~~~~G~y~~ 343 (692)
|+|+++++|++ .+.|..++
T Consensus 206 d~i~il~~G~i-~~~g~~~~ 224 (306)
T PRK13537 206 DRLCVIEEGRK-IAEGAPHA 224 (306)
T ss_pred CEEEEEECCEE-EEECCHHH
Confidence 99999999998 46777544
No 62
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=1.6e-43 Score=379.58 Aligned_cols=207 Identities=28% Similarity=0.456 Sum_probs=177.7
Q ss_pred cEEEEeEEEEeCC----eeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC------------
Q 005532 97 GVKLENISKSYKG----VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN------------ 160 (692)
Q Consensus 97 ~l~i~~ls~~y~~----~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~------------ 160 (692)
+|+++|++|+|++ .++|+||||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.+
T Consensus 1 mI~~~~lsk~y~~~~~~~~~L~~vsl~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~p~~G~I~i~G~~i~~~~~~~l~~~ 80 (343)
T TIGR02314 1 MIKLSNITKVFHQGTKTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTSGSVIVDGQDLTTLSNSELTKA 80 (343)
T ss_pred CEEEEEEEEEECCCCcceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHHH
Confidence 3899999999952 469999999999999999999999999999999999999999999998742
Q ss_pred -ceEEEEcccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHH
Q 005532 161 -MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKV 239 (692)
Q Consensus 161 -~~i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 239 (692)
..|+|++|++.+++..||++|+...... ...+.....+++
T Consensus 81 r~~Ig~v~Q~~~l~~~~tv~eni~~~~~~---------------------------------------~~~~~~~~~~~v 121 (343)
T TIGR02314 81 RRQIGMIFQHFNLLSSRTVFGNVALPLEL---------------------------------------DNTPKDEIKRKV 121 (343)
T ss_pred hcCEEEEECCccccccCcHHHHHHHHHHH---------------------------------------cCCCHHHHHHHH
Confidence 2599999999988889999998532100 001112334567
Q ss_pred HHHhhhcCCCccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc----CCCeEEEEecC
Q 005532 240 SKLMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVIISHD 315 (692)
Q Consensus 240 ~~ll~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~----~~~tvI~vsHd 315 (692)
.++++.+|+. +..++++.+|||||||||+|||||+.+|++|||||||++||+.+..++.++|++ .+.|||+|||+
T Consensus 122 ~e~l~~vgL~-~~~~~~~~~LSgGqkQRV~IARAL~~~P~iLLlDEPts~LD~~t~~~i~~lL~~l~~~~g~tiiliTH~ 200 (343)
T TIGR02314 122 TELLALVGLG-DKHDSYPSNLSGGQKQRVAIARALASNPKVLLCDEATSALDPATTQSILELLKEINRRLGLTILLITHE 200 (343)
T ss_pred HHHHHHcCCc-hhhhCChhhCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCC
Confidence 7889999996 578899999999999999999999999999999999999999999999887753 48999999999
Q ss_pred HHHHHhhcCeEEEEecceEEEeccChHHH
Q 005532 316 RAFLDQLCTKIVETEMGVSRTYEGNYSQY 344 (692)
Q Consensus 316 ~~~l~~~~d~i~~l~~G~~~~~~G~y~~~ 344 (692)
++.+.++||+|++|++|++. ..|...++
T Consensus 201 ~~~v~~~~d~v~vl~~G~iv-~~g~~~~v 228 (343)
T TIGR02314 201 MDVVKRICDCVAVISNGELI-EQGTVSEI 228 (343)
T ss_pred HHHHHHhCCEEEEEECCEEE-EEcCHHHH
Confidence 99999999999999999984 56766443
No 63
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.1e-43 Score=359.92 Aligned_cols=208 Identities=28% Similarity=0.455 Sum_probs=180.7
Q ss_pred CcEEEEeEEEEeCCe-eceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC-----------ceE
Q 005532 96 SGVKLENISKSYKGV-TVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN-----------MKI 163 (692)
Q Consensus 96 ~~l~i~~ls~~y~~~-~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~-----------~~i 163 (692)
+++.++|++|+|++. ++|+++||+|++|++++|+|+||||||||+++|+|+++|++|.|.++|.. .+|
T Consensus 2 ~~i~~~~l~~~y~~~~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~p~~G~v~~~g~~~~~~~~~~~~~~~v 81 (235)
T COG1122 2 RMIEAENLSFRYPGRKAALKDVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLKPTSGEVLVDGLDTSSEKSLLELRQKV 81 (235)
T ss_pred ceEEEEEEEEEcCCCceeeeeeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCcCCCCEEEECCeeccchhhHHHhhcce
Confidence 358999999999876 89999999999999999999999999999999999999999999988754 359
Q ss_pred EEEcccCccC-CCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHH
Q 005532 164 AFLSQEFEVS-MSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKL 242 (692)
Q Consensus 164 ~~v~Q~~~~~-~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l 242 (692)
|||+|+|..+ +..||.+++..+... ..++..++++++.++
T Consensus 82 G~VfQnpd~q~~~~tV~~evafg~~n---------------------------------------~g~~~~e~~~rv~~~ 122 (235)
T COG1122 82 GLVFQNPDDQLFGPTVEDEVAFGLEN---------------------------------------LGLPREEIEERVAEA 122 (235)
T ss_pred EEEEECcccccccCcHHHHHhhchhh---------------------------------------cCCCHHHHHHHHHHH
Confidence 9999999654 466999998643211 113333567889999
Q ss_pred hhhcCCCccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc----CCCeEEEEecCHHH
Q 005532 243 MPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVIISHDRAF 318 (692)
Q Consensus 243 l~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~----~~~tvI~vsHd~~~ 318 (692)
+..+|+. +..++++.+||||||||||||.+|+.+|++|||||||++||+.+++.+.+++++ .|+|+|++|||+++
T Consensus 123 l~~vgl~-~~~~r~p~~LSGGqkqRvaIA~vLa~~P~iliLDEPta~LD~~~~~~l~~~l~~L~~~~~~tii~~tHd~~~ 201 (235)
T COG1122 123 LELVGLE-ELLDRPPFNLSGGQKQRVAIAGVLAMGPEILLLDEPTAGLDPKGRRELLELLKKLKEEGGKTIIIVTHDLEL 201 (235)
T ss_pred HHHcCch-hhccCCccccCCcceeeHHhhHHHHcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhcCCCeEEEEeCcHHH
Confidence 9999997 568999999999999999999999999999999999999999999999887753 37899999999999
Q ss_pred HHhhcCeEEEEecceEEEeccChHHH
Q 005532 319 LDQLCTKIVETEMGVSRTYEGNYSQY 344 (692)
Q Consensus 319 l~~~~d~i~~l~~G~~~~~~G~y~~~ 344 (692)
+..+||+++++++|++ .+.|...++
T Consensus 202 ~~~~ad~v~vl~~G~i-~~~g~p~~i 226 (235)
T COG1122 202 VLEYADRVVVLDDGKI-LADGDPAEI 226 (235)
T ss_pred HHhhCCEEEEEECCEE-eecCCHHHH
Confidence 9999999999999998 577865333
No 64
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=1.2e-43 Score=358.99 Aligned_cols=196 Identities=26% Similarity=0.452 Sum_probs=168.3
Q ss_pred EEEEeEEEEeCC--eeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC-------------ce
Q 005532 98 VKLENISKSYKG--VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN-------------MK 162 (692)
Q Consensus 98 l~i~~ls~~y~~--~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~-------------~~ 162 (692)
|+++|++++|++ +++|+++||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.+ ..
T Consensus 2 l~~~~l~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 81 (216)
T TIGR00960 2 IRFEQVSKAYPGGHQPALDNLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEKPTRGKIRFNGQDLTRLRGREIPFLRRH 81 (216)
T ss_pred eEEEEEEEEecCCCeeEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEehhhcChhHHHHHHHh
Confidence 789999999964 469999999999999999999999999999999999999999999998742 25
Q ss_pred EEEEcccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHH
Q 005532 163 IAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKL 242 (692)
Q Consensus 163 i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l 242 (692)
|+|++|++.+++..||.||+...... . ....+....++.++
T Consensus 82 i~~~~q~~~~~~~~tv~e~l~~~~~~---------------~------------------------~~~~~~~~~~~~~~ 122 (216)
T TIGR00960 82 IGMVFQDHRLLSDRTVYDNVAFPLRI---------------I------------------------GVPPRDANERVSAA 122 (216)
T ss_pred ceEEecCccccccccHHHHHHHHHHh---------------c------------------------CCCHHHHHHHHHHH
Confidence 99999999887888999998532100 0 00111223456778
Q ss_pred hhhcCCCccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc---CCCeEEEEecCHHHH
Q 005532 243 MPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK---QDVPMVIISHDRAFL 319 (692)
Q Consensus 243 l~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~---~~~tvI~vsHd~~~l 319 (692)
++.+|+. +..++++.+|||||||||+|||||+.+|+||||||||++||+.+++++.++|++ .+.|||+||||++++
T Consensus 123 l~~~~l~-~~~~~~~~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~~~ 201 (216)
T TIGR00960 123 LEKVGLE-GKAHALPMQLSGGEQQRVAIARAIVHKPPLLLADEPTGNLDPELSRDIMRLFEEFNRRGTTVLVATHDINLV 201 (216)
T ss_pred HHHcCCh-hhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence 8889986 567888999999999999999999999999999999999999999999887753 488999999999999
Q ss_pred HhhcCeEEEEecce
Q 005532 320 DQLCTKIVETEMGV 333 (692)
Q Consensus 320 ~~~~d~i~~l~~G~ 333 (692)
..+||+|+++++|+
T Consensus 202 ~~~~d~i~~l~~G~ 215 (216)
T TIGR00960 202 ETYRHRTLTLSRGR 215 (216)
T ss_pred HHhCCEEEEEeCCc
Confidence 99999999999886
No 65
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=1.3e-43 Score=347.94 Aligned_cols=206 Identities=32% Similarity=0.433 Sum_probs=180.9
Q ss_pred CceEEEEeEEEEcCCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccce------------
Q 005532 422 RSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL------------ 489 (692)
Q Consensus 422 ~~~l~~~~l~~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~~------------ 489 (692)
.++|++++|+++||++.+++|+||+|++||+++|+|++|||||||||+|.|+++|++|+|.++|.++.
T Consensus 6 ~~~I~vr~v~~~fG~~~Ild~v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~P~~GeI~i~G~~i~~ls~~~~~~ir~ 85 (263)
T COG1127 6 EPLIEVRGVTKSFGDRVILDGVDLDVPRGEILAILGGSGSGKSTLLRLILGLLRPDKGEILIDGEDIPQLSEEELYEIRK 85 (263)
T ss_pred cceEEEeeeeeecCCEEEecCceeeecCCcEEEEECCCCcCHHHHHHHHhccCCCCCCeEEEcCcchhccCHHHHHHHHh
Confidence 56799999999999999999999999999999999999999999999999999999999999998762
Q ss_pred -eeeecccchhhcCCCccHHHHHHHHhccc---cH----HHHHHHHhhcCCCcccccccCCCCCHHHHHHHHHHHHhccC
Q 005532 490 -PNYFEQNQAEALDLDKTVLETVAEAAEDW---RI----DDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKP 561 (692)
Q Consensus 490 -~~~~~q~~~~~l~~~~tv~e~~~~~~~~~---~~----~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~LAral~~~ 561 (692)
.++++|. -.++.++||+||+....... .. +-+..-|+.+|+.+...++.|++|||||++|++||||++.+
T Consensus 86 r~GvlFQ~--gALFssltV~eNVafplre~~~lp~~~i~~lv~~KL~~VGL~~~~~~~~PsELSGGM~KRvaLARAiald 163 (263)
T COG1127 86 RMGVLFQQ--GALFSSLTVFENVAFPLREHTKLPESLIRELVLMKLELVGLRGAAADLYPSELSGGMRKRVALARAIALD 163 (263)
T ss_pred heeEEeec--cccccccchhHhhheehHhhccCCHHHHHHHHHHHHHhcCCChhhhhhCchhhcchHHHHHHHHHHHhcC
Confidence 2455554 46788999999998643221 11 23555688999987778999999999999999999999999
Q ss_pred CcEEEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEECCEEEEecCChhHHHH
Q 005532 562 STLLVLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYYLE 630 (692)
Q Consensus 562 p~lLlLDEPTn~LD~~~~~~l~~~l~~~----~~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~~~~~ 630 (692)
|+||++||||+||||-+...+.++|++. +.|+|+||||++.+..+||||++|.+|++. +.|+.++..+
T Consensus 164 Pell~~DEPtsGLDPI~a~~~~~LI~~L~~~lg~T~i~VTHDl~s~~~i~Drv~~L~~gkv~-~~Gt~~el~~ 235 (263)
T COG1127 164 PELLFLDEPTSGLDPISAGVIDELIRELNDALGLTVIMVTHDLDSLLTIADRVAVLADGKVI-AEGTPEELLA 235 (263)
T ss_pred CCEEEecCCCCCCCcchHHHHHHHHHHHHHhhCCEEEEEECChHHHHhhhceEEEEeCCEEE-EeCCHHHHHh
Confidence 9999999999999999999888888654 569999999999999999999999999998 5688877754
No 66
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1e-43 Score=360.06 Aligned_cols=204 Identities=28% Similarity=0.394 Sum_probs=179.1
Q ss_pred eEEEEeEEEEcCC-----eecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccce---------
Q 005532 424 VVTIKNLEFGYED-----RLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL--------- 489 (692)
Q Consensus 424 ~l~~~~l~~~y~~-----~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~~--------- 489 (692)
||++++|++.|+. ..+++||||+|++||++||||++|+|||||+|+|.++.+|++|+|.++|.++.
T Consensus 1 mI~l~~vsK~~~~~~~~~~~al~~vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~PtsG~v~v~G~di~~l~~~~Lr~ 80 (339)
T COG1135 1 MIELENVSKTFGQTGTGTVTALDDVSLEIPKGEIFGIIGYSGAGKSTLLRLINLLERPTSGSVFVDGQDLTALSEAELRQ 80 (339)
T ss_pred CeEEEeeeeeeccCCCCceeeeccceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCCCCCceEEEcCEecccCChHHHHH
Confidence 5899999999985 36899999999999999999999999999999999999999999999997652
Q ss_pred ----eeeecccchhhcCCCccHHHHHHHHhcc--cc----HHHHHHHHhhcCCCcccccccCCCCCHHHHHHHHHHHHhc
Q 005532 490 ----PNYFEQNQAEALDLDKTVLETVAEAAED--WR----IDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMV 559 (692)
Q Consensus 490 ----~~~~~q~~~~~l~~~~tv~e~~~~~~~~--~~----~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~LAral~ 559 (692)
+++++|+ .++....||++|+.+.... +. ..++.++|+.+|++ +..+++|.+|||||||||+|||||+
T Consensus 81 ~R~~IGMIFQh--FnLLssrTV~~NvA~PLeiag~~k~ei~~RV~elLelVgL~-dk~~~yP~qLSGGQKQRVaIARALa 157 (339)
T COG1135 81 LRQKIGMIFQH--FNLLSSRTVFENVAFPLELAGVPKAEIKQRVAELLELVGLS-DKADRYPAQLSGGQKQRVAIARALA 157 (339)
T ss_pred HHhhccEEecc--ccccccchHHhhhhhhHhhcCCCHHHHHHHHHHHHHHcCCh-hhhccCchhcCcchhhHHHHHHHHh
Confidence 4566665 4677789999999876432 21 24688999999996 7889999999999999999999999
Q ss_pred cCCcEEEEeCCCCCCCHHHHHHHHHHHHh----cCceEEEEecCHHHHHhhccEEEEEECCEEEEecCChhHHHH
Q 005532 560 KPSTLLVLDEPTNHLDIPSKEMLEEAISE----YKGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYYLE 630 (692)
Q Consensus 560 ~~p~lLlLDEPTn~LD~~~~~~l~~~l~~----~~~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~~~~~ 630 (692)
.+|+|||+|||||+|||++.+.+.+.|++ ++-||++|||.++.+.++||||.+|++|++++.+.-++-|..
T Consensus 158 ~~P~iLL~DEaTSALDP~TT~sIL~LL~~In~~lglTIvlITHEm~Vvk~ic~rVavm~~G~lvE~G~v~~vF~~ 232 (339)
T COG1135 158 NNPKILLCDEATSALDPETTQSILELLKDINRELGLTIVLITHEMEVVKRICDRVAVLDQGRLVEEGTVSEVFAN 232 (339)
T ss_pred cCCCEEEecCccccCChHHHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHhhhheEeeCCEEEEeccHHHhhcC
Confidence 99999999999999999999999998875 456999999999999999999999999999986544555544
No 67
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2e-43 Score=356.64 Aligned_cols=198 Identities=32% Similarity=0.470 Sum_probs=170.1
Q ss_pred EEEEeEEEEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC--------ceEEEEccc
Q 005532 98 VKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN--------MKIAFLSQE 169 (692)
Q Consensus 98 l~i~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~--------~~i~~v~Q~ 169 (692)
|+++|++++|+++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.. ..|+|++|+
T Consensus 1 l~~~~l~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~i~~v~q~ 80 (213)
T cd03259 1 LELKGLSKTYGSVRALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLERPDSGEILIDGRDVTGVPPERRNIGMVFQD 80 (213)
T ss_pred CeeeeeEEEeCCeeeecceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcCcCchhhccEEEEcCc
Confidence 468999999998889999999999999999999999999999999999999999999998742 259999999
Q ss_pred CccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHHhhhcCCC
Q 005532 170 FEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFT 249 (692)
Q Consensus 170 ~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl~ 249 (692)
+.+++..|+++|+...... . .........++.++++.+|+.
T Consensus 81 ~~~~~~~tv~~~l~~~~~~---------------~------------------------~~~~~~~~~~~~~~l~~~~l~ 121 (213)
T cd03259 81 YALFPHLTVAENIAFGLKL---------------R------------------------GVPKAEIRARVRELLELVGLE 121 (213)
T ss_pred hhhccCCcHHHHHHhHHHH---------------c------------------------CCCHHHHHHHHHHHHHHcCCh
Confidence 9887788999998532100 0 000011234566788888986
Q ss_pred ccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc----CCCeEEEEecCHHHHHhhcCe
Q 005532 250 ADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVIISHDRAFLDQLCTK 325 (692)
Q Consensus 250 ~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~----~~~tvI~vsHd~~~l~~~~d~ 325 (692)
...++++.+|||||||||+|||||+.+|++|||||||++||+.++.++.++|++ .+.|||++|||++++..+||+
T Consensus 122 -~~~~~~~~~LSgG~~qrl~la~al~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~ 200 (213)
T cd03259 122 -GLLNRYPHELSGGQQQRVALARALAREPSLLLLDEPLSALDAKLREELREELKELQRELGITTIYVTHDQEEALALADR 200 (213)
T ss_pred -hhhhcChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhcCE
Confidence 567888999999999999999999999999999999999999999999988754 488999999999999999999
Q ss_pred EEEEecceEE
Q 005532 326 IVETEMGVSR 335 (692)
Q Consensus 326 i~~l~~G~~~ 335 (692)
|+++++|++.
T Consensus 201 v~~l~~G~i~ 210 (213)
T cd03259 201 IAVMNEGRIV 210 (213)
T ss_pred EEEEECCEEE
Confidence 9999999874
No 68
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.1e-43 Score=380.09 Aligned_cols=207 Identities=26% Similarity=0.404 Sum_probs=179.0
Q ss_pred cEEEEeEEEEe-CCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC--------ceEEEEc
Q 005532 97 GVKLENISKSY-KGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN--------MKIAFLS 167 (692)
Q Consensus 97 ~l~i~~ls~~y-~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~--------~~i~~v~ 167 (692)
+|+++|++++| ++.++|+|+||+|++|++++|+|||||||||||++|+|+++|++|+|.++|.. ..||||+
T Consensus 3 ~l~i~~l~~~~~~~~~~l~~vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~p~~G~I~~~g~~i~~~~~~~r~ig~v~ 82 (356)
T PRK11650 3 GLKLQAVRKSYDGKTQVIKGIDLDVADGEFIVLVGPSGCGKSTLLRMVAGLERITSGEIWIGGRVVNELEPADRDIAMVF 82 (356)
T ss_pred EEEEEeEEEEeCCCCEEEeeeeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCHHHCCEEEEe
Confidence 59999999999 77889999999999999999999999999999999999999999999998743 3599999
Q ss_pred ccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHHhhhcC
Q 005532 168 QEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELG 247 (692)
Q Consensus 168 Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lg 247 (692)
|++.+++++||+||+...+.. ..........++.++++.+|
T Consensus 83 Q~~~lfp~~tv~eNi~~~~~~---------------------------------------~~~~~~~~~~~~~~~l~~~g 123 (356)
T PRK11650 83 QNYALYPHMSVRENMAYGLKI---------------------------------------RGMPKAEIEERVAEAARILE 123 (356)
T ss_pred CCccccCCCCHHHHHHhHHhh---------------------------------------cCCCHHHHHHHHHHHHHHcC
Confidence 999999999999998643210 00111223456778899999
Q ss_pred CCccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHc----cCCCeEEEEecCHHHHHhhc
Q 005532 248 FTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG----KQDVPMVIISHDRAFLDQLC 323 (692)
Q Consensus 248 l~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~----~~~~tvI~vsHd~~~l~~~~ 323 (692)
+. ...++++.+|||||||||+|||||+.+|+||||||||++||+.+++.+.+.|+ +.+.|+|+||||.+++..+|
T Consensus 124 L~-~~~~~~~~~LSgGq~QRvalARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~l~ 202 (356)
T PRK11650 124 LE-PLLDRKPRELSGGQRQRVAMGRAIVREPAVFLFDEPLSNLDAKLRVQMRLEIQRLHRRLKTTSLYVTHDQVEAMTLA 202 (356)
T ss_pred Ch-hHhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhC
Confidence 96 67899999999999999999999999999999999999999999999887664 35899999999999999999
Q ss_pred CeEEEEecceEEEeccChHHH
Q 005532 324 TKIVETEMGVSRTYEGNYSQY 344 (692)
Q Consensus 324 d~i~~l~~G~~~~~~G~y~~~ 344 (692)
|+|++|++|++. ..|...+.
T Consensus 203 D~i~vl~~G~i~-~~g~~~~~ 222 (356)
T PRK11650 203 DRVVVMNGGVAE-QIGTPVEV 222 (356)
T ss_pred CEEEEEeCCEEE-EECCHHHH
Confidence 999999999984 45665443
No 69
>PRK00349 uvrA excinuclease ABC subunit A; Reviewed
Probab=100.00 E-value=2.2e-42 Score=407.93 Aligned_cols=337 Identities=22% Similarity=0.292 Sum_probs=238.0
Q ss_pred HHHHHHHHhhhcCCCccccccccccCChHHHHHHHHHHHHccCC--CeEEEcCCCCCCCHHHHHHHHHHHc---cCCCeE
Q 005532 235 LDAKVSKLMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDP--DLLLLDEPTNHLDLDTIEWLEGYLG---KQDVPM 309 (692)
Q Consensus 235 ~~~~i~~ll~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p--~lLLLDEPts~LD~~~~~~L~~~L~---~~~~tv 309 (692)
+..++. +|+.+||....+++++.+|||||+|||+||++|+.+| +||||||||++||+..+++|.++|+ +.|.||
T Consensus 466 i~~rl~-~L~~vGL~~l~l~r~~~~LSgGE~QRv~LA~aL~~~~~~~llILDEPtagLd~~~~~~L~~~L~~L~~~G~TV 544 (943)
T PRK00349 466 IRERLK-FLVDVGLDYLTLSRSAGTLSGGEAQRIRLATQIGSGLTGVLYVLDEPSIGLHQRDNDRLIETLKHLRDLGNTL 544 (943)
T ss_pred HHHHHH-HhhccccCCCCCCCchhhCCHHHHHHHHHHHHHhhCCCCcEEEecCCccCCCHHHHHHHHHHHHHHHhCCCEE
Confidence 345554 6888999633379999999999999999999999997 9999999999999999999988764 568999
Q ss_pred EEEecCHHHHHhhcCeEEEE------ecceEEEeccChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcch
Q 005532 310 VIISHDRAFLDQLCTKIVET------EMGVSRTYEGNYSQYVLEKAAWIESQYAAWEKQQREIEQTKDLINRLGAGANSG 383 (692)
Q Consensus 310 I~vsHd~~~l~~~~d~i~~l------~~G~~~~~~G~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~ 383 (692)
|+|+||++++. .||+|++| ++|++ .+.|.+.++...... + ...++ .+
T Consensus 545 IvVeH~~~~i~-~aD~vi~LgpgaG~~~G~i-v~~g~~~e~~~~~~~---------------l--~~~~l---~~----- 597 (943)
T PRK00349 545 IVVEHDEDTIR-AADYIVDIGPGAGVHGGEV-VASGTPEEIMKNPNS---------------L--TGQYL---SG----- 597 (943)
T ss_pred EEEeCCHHHHH-hCCEEEEeccccCCCCCEE-eeccCHHHHhcChhh---------------e--eehhh---cc-----
Confidence 99999999986 69999999 78887 577876543221000 0 00000 00
Q ss_pred hhhHHHHHHHHHHHHhhhcccccccceeeecCCCCCCCCceEEEEeEEEEcCCeecccceeEEEeCCCEEEEEcCCCCcH
Q 005532 384 RASSAEKKLERLQEEEQIEKPFQRKQMKIRFPERGRSGRSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGK 463 (692)
Q Consensus 384 ~~~~~~~~l~rl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGK 463 (692)
+. ....+.. + .....+.|+++|++. ..|+++||+|++|+++||+|+|||||
T Consensus 598 ~~--------------~~~~~~~--------~--~~~~~~~L~v~~l~~-----~~L~~isl~Ip~GeivgVtGvsGSGK 648 (943)
T PRK00349 598 KK--------------KIEVPKE--------R--RKGNGKFLKLKGARE-----NNLKNVDVEIPLGKFTCVTGVSGSGK 648 (943)
T ss_pred cc--------------ccccccc--------c--cCCCcceEEecCCcc-----CCcCceEEEEeCCCEEEEEcCCCCCH
Confidence 00 0000000 0 011234689999862 35999999999999999999999999
Q ss_pred HHHHHHHh---------cCCCCCee------------EEEECCccce---------------------------------
Q 005532 464 STLLKLIM---------GLEKPRGG------------EVLLGEHNVL--------------------------------- 489 (692)
Q Consensus 464 STLl~~L~---------g~~~p~~G------------~i~~~~~~~~--------------------------------- 489 (692)
|||++-+. +...+..+ .|.++..++.
T Consensus 649 STLl~~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~vdQ~pig~~~RS~~~Ty~g~~d~iR~lfa~~~~a~~~g~~ 728 (943)
T PRK00349 649 STLINETLYKALARKLNGAKKVPGKHKEIEGLEHLDKVIDIDQSPIGRTPRSNPATYTGVFDPIRELFAGTPEAKARGYK 728 (943)
T ss_pred HHHHHHHHHHHHHHHhcccccCCCCCcccccccCCCceEEEecCCCCCCCCCCceeeccccHHHHHHhccCccccccCCC
Confidence 99998763 11111111 1122211100
Q ss_pred eeeecccc------------------h------------------------------hhcCCCccHHHHHHHHhccccHH
Q 005532 490 PNYFEQNQ------------------A------------------------------EALDLDKTVLETVAEAAEDWRID 521 (692)
Q Consensus 490 ~~~~~q~~------------------~------------------------------~~l~~~~tv~e~~~~~~~~~~~~ 521 (692)
.+.|..|. . ..-..++|+.+++..........
T Consensus 729 ~~~FS~N~~~G~C~~C~G~G~~~~~~~f~~~~~~~C~~C~G~R~~~e~l~v~~~g~~i~dvl~ltv~E~l~~f~~~~~i~ 808 (943)
T PRK00349 729 PGRFSFNVKGGRCEACQGDGVIKIEMHFLPDVYVPCDVCKGKRYNRETLEVKYKGKNIADVLDMTVEEALEFFEAIPKIA 808 (943)
T ss_pred cccCCCCCCCCCCCcccccceEEEEeccCCCccccCccccCccccccceEEEECCCCHHHHhcCcHHHHHHHHHhchhhh
Confidence 00011010 0 00001245666655543322334
Q ss_pred HHHHHHhhcCCCcccccccCCCCCHHHHHHHHHHHHhccCC---cEEEEeCCCCCCCHHHHHHHHHHHHhc---CceEEE
Q 005532 522 DIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPS---TLLVLDEPTNHLDIPSKEMLEEAISEY---KGTVIT 595 (692)
Q Consensus 522 ~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~LAral~~~p---~lLlLDEPTn~LD~~~~~~l~~~l~~~---~~tvii 595 (692)
...+.|..+|+....+++++.+|||||+||+.||++|+.+| +|+||||||++||+..+..|.+.|.++ +.|||+
T Consensus 809 ~~l~~L~~vgL~~l~l~~~~~tLSgGEkQRl~LAraL~~~p~~~~llILDEPtsGLD~~~~~~L~~~L~~l~~~G~TVIi 888 (943)
T PRK00349 809 RKLQTLVDVGLGYIKLGQPATTLSGGEAQRVKLAKELSKRSTGKTLYILDEPTTGLHFEDIRKLLEVLHRLVDKGNTVVV 888 (943)
T ss_pred HHHHHHHHCCCCcccccCCcccCCHHHHHHHHHHHHHhcCCCCCeEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEE
Confidence 45678999999543578999999999999999999999999 999999999999999999999998865 459999
Q ss_pred EecCHHHHHhhccEEEEE------ECCEEEEecCChhHHHH
Q 005532 596 VSHDRYFVKQIVNRVVEV------KGSNLQDYAGDYNYYLE 630 (692)
Q Consensus 596 vSHd~~~l~~~~d~i~~l------~~g~l~~~~g~~~~~~~ 630 (692)
||||++++. .||+|++| ++|+++ +.|..++...
T Consensus 889 itH~~~~i~-~aD~ii~Lgp~~G~~~G~Iv-~~Gt~~el~~ 927 (943)
T PRK00349 889 IEHNLDVIK-TADWIIDLGPEGGDGGGEIV-ATGTPEEVAK 927 (943)
T ss_pred EecCHHHHH-hCCEEEEecCCcCCCCCEEE-EeCCHHHHHh
Confidence 999999996 69999999 678887 5677766643
No 70
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6e-43 Score=376.90 Aligned_cols=208 Identities=25% Similarity=0.390 Sum_probs=180.2
Q ss_pred CCcEEEEeEEEEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC--------ceEEEE
Q 005532 95 SSGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN--------MKIAFL 166 (692)
Q Consensus 95 ~~~l~i~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~--------~~i~~v 166 (692)
++.|+++|+++.|++.++|+|+||+|++||+++|+|||||||||||++|+|+++|++|+|.++|.. ..|+||
T Consensus 4 ~~~l~~~~l~~~~~~~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~~r~ig~v 83 (351)
T PRK11432 4 KNFVVLKNITKRFGSNTVIDNLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEKPTEGQIFIDGEDVTHRSIQQRDICMV 83 (351)
T ss_pred CcEEEEEeEEEEECCeEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCHHHCCEEEE
Confidence 457999999999998889999999999999999999999999999999999999999999998742 369999
Q ss_pred cccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHHhhhc
Q 005532 167 SQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPEL 246 (692)
Q Consensus 167 ~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~l 246 (692)
+|++.+++++||+||+...+.. ...+.....+++.++++.+
T Consensus 84 fQ~~~lfp~~tv~eNi~~~l~~---------------------------------------~~~~~~~~~~~v~~~l~~~ 124 (351)
T PRK11432 84 FQSYALFPHMSLGENVGYGLKM---------------------------------------LGVPKEERKQRVKEALELV 124 (351)
T ss_pred eCCcccCCCCCHHHHHHHHHhH---------------------------------------cCCCHHHHHHHHHHHHHHc
Confidence 9999999999999998643210 0011122345677888899
Q ss_pred CCCccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHc----cCCCeEEEEecCHHHHHhh
Q 005532 247 GFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG----KQDVPMVIISHDRAFLDQL 322 (692)
Q Consensus 247 gl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~----~~~~tvI~vsHd~~~l~~~ 322 (692)
|+. ...++++.+|||||||||+|||||+.+|+||||||||++||+.+++++.+.|+ +.+.|+|+||||.+++..+
T Consensus 125 gl~-~~~~r~~~~LSgGq~QRVaLARaL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~e~~~l 203 (351)
T PRK11432 125 DLA-GFEDRYVDQISGGQQQRVALARALILKPKVLLFDEPLSNLDANLRRSMREKIRELQQQFNITSLYVTHDQSEAFAV 203 (351)
T ss_pred CCc-hhhcCChhhCCHHHHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHh
Confidence 996 57799999999999999999999999999999999999999999999987764 3589999999999999999
Q ss_pred cCeEEEEecceEEEeccChHH
Q 005532 323 CTKIVETEMGVSRTYEGNYSQ 343 (692)
Q Consensus 323 ~d~i~~l~~G~~~~~~G~y~~ 343 (692)
||+|++|++|++. ..|...+
T Consensus 204 aD~i~vm~~G~i~-~~g~~~~ 223 (351)
T PRK11432 204 SDTVIVMNKGKIM-QIGSPQE 223 (351)
T ss_pred CCEEEEEECCEEE-EEcCHHH
Confidence 9999999999984 4566543
No 71
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=8.3e-43 Score=374.54 Aligned_cols=209 Identities=28% Similarity=0.442 Sum_probs=178.5
Q ss_pred CCCcEEEEeEEEEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC---------ceEE
Q 005532 94 ISSGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN---------MKIA 164 (692)
Q Consensus 94 ~~~~l~i~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~---------~~i~ 164 (692)
.+.+|+++|++++|+++.+|+||||+|++|+++||+||||||||||+++|+|+++|++|+|.++|.+ ..||
T Consensus 38 ~~~~i~i~nl~k~y~~~~~l~~is~~i~~Gei~gLlGpNGaGKSTLl~~L~Gl~~p~~G~i~i~G~~~~~~~~~~~~~ig 117 (340)
T PRK13536 38 STVAIDLAGVSKSYGDKAVVNGLSFTVASGECFGLLGPNGAGKSTIARMILGMTSPDAGKITVLGVPVPARARLARARIG 117 (340)
T ss_pred CceeEEEEEEEEEECCEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCceEEEECCEECCcchHHHhccEE
Confidence 3457999999999999899999999999999999999999999999999999999999999998743 3599
Q ss_pred EEcccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHHhh
Q 005532 165 FLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMP 244 (692)
Q Consensus 165 ~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~ 244 (692)
|++|++.+++..|+.||+... ... . .........++.++++
T Consensus 118 ~v~q~~~~~~~~tv~e~l~~~-~~~--------------~------------------------~~~~~~~~~~~~~ll~ 158 (340)
T PRK13536 118 VVPQFDNLDLEFTVRENLLVF-GRY--------------F------------------------GMSTREIEAVIPSLLE 158 (340)
T ss_pred EEeCCccCCCCCcHHHHHHHH-HHH--------------c------------------------CCCHHHHHHHHHHHHH
Confidence 999999888889999998521 000 0 0011112344567788
Q ss_pred hcCCCccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc---CCCeEEEEecCHHHHHh
Q 005532 245 ELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK---QDVPMVIISHDRAFLDQ 321 (692)
Q Consensus 245 ~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~---~~~tvI~vsHd~~~l~~ 321 (692)
.+|+. +..++++.+|||||||||+||+||+.+|++|||||||+|||+.++.++.++|++ .|.|||++||+++++.+
T Consensus 159 ~~~L~-~~~~~~~~~LS~G~kqrv~lA~aL~~~P~lLiLDEPt~gLD~~~r~~l~~~l~~l~~~g~tilisSH~l~e~~~ 237 (340)
T PRK13536 159 FARLE-SKADARVSDLSGGMKRRLTLARALINDPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFMEEAER 237 (340)
T ss_pred HcCCc-hhhCCChhhCCHHHHHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHH
Confidence 88986 567889999999999999999999999999999999999999999999988754 58999999999999999
Q ss_pred hcCeEEEEecceEEEeccChHH
Q 005532 322 LCTKIVETEMGVSRTYEGNYSQ 343 (692)
Q Consensus 322 ~~d~i~~l~~G~~~~~~G~y~~ 343 (692)
+||+|+++++|++ .+.|...+
T Consensus 238 ~~d~i~il~~G~i-~~~g~~~~ 258 (340)
T PRK13536 238 LCDRLCVLEAGRK-IAEGRPHA 258 (340)
T ss_pred hCCEEEEEECCEE-EEEcCHHH
Confidence 9999999999998 46676543
No 72
>PRK10636 putative ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.1e-42 Score=401.10 Aligned_cols=218 Identities=32% Similarity=0.540 Sum_probs=180.7
Q ss_pred eEEEEeEEEEcCCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccceeeeecccchhhcCC
Q 005532 424 VVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQNQAEALDL 503 (692)
Q Consensus 424 ~l~~~~l~~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~~~~~~~q~~~~~l~~ 503 (692)
+|.++||+++|+++.+|+++||+|++|+++||+|||||||||||++|+|+++|++|+|.+++. ...+|+.|... . .
T Consensus 1 ~i~i~nls~~~g~~~~l~~vs~~i~~Ge~v~LvG~NGsGKSTLLkiL~G~~~pd~G~I~~~~~-~~i~~~~q~~~-~--~ 76 (638)
T PRK10636 1 MIVFSSLQIRRGVRVLLDNATATINPGQKVGLVGKNGCGKSTLLALLKNEISADGGSYTFPGN-WQLAWVNQETP-A--L 76 (638)
T ss_pred CEEEEEEEEEeCCceeecCcEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEecCC-CEEEEEecCCC-C--C
Confidence 489999999999999999999999999999999999999999999999999999999999874 34566665321 1 1
Q ss_pred CccHHHHHHHH--------------------------------hcccc-HHHHHHHHhhcCCCcccccccCCCCCHHHHH
Q 005532 504 DKTVLETVAEA--------------------------------AEDWR-IDDIKGLLGRCNFKADMLDRKVSLLSGGEKA 550 (692)
Q Consensus 504 ~~tv~e~~~~~--------------------------------~~~~~-~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkq 550 (692)
..++.+++... ...|. ...+..+|..+||.....++++.+|||||||
T Consensus 77 ~~~~~~~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSgGerq 156 (638)
T PRK10636 77 PQPALEYVIDGDREYRQLEAQLHDANERNDGHAIATIHGKLDAIDAWTIRSRAASLLHGLGFSNEQLERPVSDFSGGWRM 156 (638)
T ss_pred CCCHHHHHHHhhHHHHHHHHHHHHHhccCCHHHHHHHHHHHHhcCCcchHHHHHHHHHhCCCCchhhcCchhhcCHHHHH
Confidence 12333222110 00111 2357789999999645678999999999999
Q ss_pred HHHHHHHhccCCcEEEEeCCCCCCCHHHHHHHHHHHHhcCceEEEEecCHHHHHhhccEEEEEECCEEEEecCChhHHHH
Q 005532 551 RLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEYKGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYYLE 630 (692)
Q Consensus 551 rv~LAral~~~p~lLlLDEPTn~LD~~~~~~l~~~l~~~~~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~~~~~ 630 (692)
||+||++|+.+|+||||||||||||+.++.||.++|.++++|||+||||++++..+||+|++|++|++..|.|+|+.|..
T Consensus 157 Rv~LA~aL~~~P~lLLLDEPtn~LD~~~~~~L~~~L~~~~~tviivsHd~~~l~~~~d~i~~L~~G~i~~~~g~~~~~~~ 236 (638)
T PRK10636 157 RLNLAQALICRSDLLLLDEPTNHLDLDAVIWLEKWLKSYQGTLILISHDRDFLDPIVDKIIHIEQQSLFEYTGNYSSFEV 236 (638)
T ss_pred HHHHHHHHccCCCEEEEcCCCCcCCHHHHHHHHHHHHhCCCeEEEEeCCHHHHHHhcCEEEEEeCCEEEEecCCHHHHHH
Confidence 99999999999999999999999999999999999999989999999999999999999999999999999999999998
Q ss_pred HhHHHHHHHHHHHHH
Q 005532 631 KNLDAREKELEREAE 645 (692)
Q Consensus 631 ~~~~~~~~~~~~~~~ 645 (692)
+++.+.+.+.+.+.+
T Consensus 237 ~~~~~~~~~~~~~~~ 251 (638)
T PRK10636 237 QRATRLAQQQAMYES 251 (638)
T ss_pred HHHHHHHHHHHHHHH
Confidence 776544433333333
No 73
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.6e-43 Score=354.16 Aligned_cols=202 Identities=29% Similarity=0.492 Sum_probs=172.5
Q ss_pred EEEEeEEEEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC---------ceEEEEcc
Q 005532 98 VKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN---------MKIAFLSQ 168 (692)
Q Consensus 98 l~i~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~---------~~i~~v~Q 168 (692)
|+++|++++|+++++|+|+||+|.+|++++|+|+||||||||+++|+|+++|++|+|.++|.. ..++|++|
T Consensus 1 i~~~~~~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~i~~~~q 80 (220)
T cd03265 1 IEVENLVKKYGDFEAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLKPTSGRATVAGHDVVREPREVRRRIGIVFQ 80 (220)
T ss_pred CEEEEEEEEECCEEeeeceeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecCcChHHHhhcEEEecC
Confidence 578999999998889999999999999999999999999999999999999999999998742 25999999
Q ss_pred cCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHHhhhcCC
Q 005532 169 EFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGF 248 (692)
Q Consensus 169 ~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl 248 (692)
++.+++..||++|+..... .. .........++.++++.+|+
T Consensus 81 ~~~~~~~~tv~~~l~~~~~---------------~~------------------------~~~~~~~~~~~~~~l~~~~l 121 (220)
T cd03265 81 DLSVDDELTGWENLYIHAR---------------LY------------------------GVPGAERRERIDELLDFVGL 121 (220)
T ss_pred CccccccCcHHHHHHHHHH---------------Hc------------------------CCCHHHHHHHHHHHHHHcCC
Confidence 9988778899999852110 00 00111233456788899998
Q ss_pred CccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc----CCCeEEEEecCHHHHHhhcC
Q 005532 249 TADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVIISHDRAFLDQLCT 324 (692)
Q Consensus 249 ~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~----~~~tvI~vsHd~~~l~~~~d 324 (692)
. ...++++.+|||||||||+|||||+.+|++|||||||++||+.+++.+.++|++ .++|||+||||++++..+||
T Consensus 122 ~-~~~~~~~~~LS~G~~qr~~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~tH~~~~~~~~~d 200 (220)
T cd03265 122 L-EAADRLVKTYSGGMRRRLEIARSLVHRPEVLFLDEPTIGLDPQTRAHVWEYIEKLKEEFGMTILLTTHYMEEAEQLCD 200 (220)
T ss_pred H-HHhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCC
Confidence 6 567889999999999999999999999999999999999999999999887743 48899999999999999999
Q ss_pred eEEEEecceEEEeccC
Q 005532 325 KIVETEMGVSRTYEGN 340 (692)
Q Consensus 325 ~i~~l~~G~~~~~~G~ 340 (692)
+|+++++|++. ..|.
T Consensus 201 ~i~~l~~G~i~-~~~~ 215 (220)
T cd03265 201 RVAIIDHGRII-AEGT 215 (220)
T ss_pred EEEEEeCCEEE-EeCC
Confidence 99999999984 3454
No 74
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=7.8e-43 Score=376.59 Aligned_cols=207 Identities=29% Similarity=0.461 Sum_probs=179.8
Q ss_pred CcEEEEeEEEEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC--------ceEEEEc
Q 005532 96 SGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN--------MKIAFLS 167 (692)
Q Consensus 96 ~~l~i~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~--------~~i~~v~ 167 (692)
.+|+++|++++|++..+|+|+||+|++|++++|+|||||||||||++|+|+++|++|+|.++|.. ..|+||+
T Consensus 3 ~~l~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~p~~G~I~i~g~~~~~~~~~~r~ig~v~ 82 (353)
T TIGR03265 3 PYLSIDNIRKRFGAFTALKDISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLERQTAGTIYQGGRDITRLPPQKRDYGIVF 82 (353)
T ss_pred cEEEEEEEEEEeCCeEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCceEEEECCEECCCCCHHHCCEEEEe
Confidence 35999999999998889999999999999999999999999999999999999999999998743 3599999
Q ss_pred ccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHHhhhcC
Q 005532 168 QEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELG 247 (692)
Q Consensus 168 Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lg 247 (692)
|++.+++++||+||+...+.. ...+......++.++++.+|
T Consensus 83 Q~~~lfp~~tv~eNi~~~~~~---------------------------------------~~~~~~~~~~~~~~~l~~l~ 123 (353)
T TIGR03265 83 QSYALFPNLTVADNIAYGLKN---------------------------------------RGMGRAEVAERVAELLDLVG 123 (353)
T ss_pred CCcccCCCCcHHHHHHHHHHh---------------------------------------cCCCHHHHHHHHHHHHHHcC
Confidence 999999999999998643210 00111233457788899999
Q ss_pred CCccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHc----cCCCeEEEEecCHHHHHhhc
Q 005532 248 FTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG----KQDVPMVIISHDRAFLDQLC 323 (692)
Q Consensus 248 l~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~----~~~~tvI~vsHd~~~l~~~~ 323 (692)
+. ...++++.+|||||||||+|||||+.+|++|||||||++||+.+++++.+.|+ +.+.|+|+||||.+++..+|
T Consensus 124 L~-~~~~~~~~~LSgGq~QRvaLARaL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~~~tvi~vTHd~~ea~~l~ 202 (353)
T TIGR03265 124 LP-GSERKYPGQLSGGQQQRVALARALATSPGLLLLDEPLSALDARVREHLRTEIRQLQRRLGVTTIMVTHDQEEALSMA 202 (353)
T ss_pred CC-chhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhC
Confidence 97 57899999999999999999999999999999999999999999999987764 35899999999999999999
Q ss_pred CeEEEEecceEEEeccChHH
Q 005532 324 TKIVETEMGVSRTYEGNYSQ 343 (692)
Q Consensus 324 d~i~~l~~G~~~~~~G~y~~ 343 (692)
|+|++|++|++. ..|...+
T Consensus 203 d~i~vl~~G~i~-~~g~~~~ 221 (353)
T TIGR03265 203 DRIVVMNHGVIE-QVGTPQE 221 (353)
T ss_pred CEEEEEECCEEE-EEcCHHH
Confidence 999999999984 4565443
No 75
>COG4555 NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.9e-43 Score=336.86 Aligned_cols=206 Identities=31% Similarity=0.501 Sum_probs=180.9
Q ss_pred cEEEEeEEEEeCCee-ceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC---------ceEEEE
Q 005532 97 GVKLENISKSYKGVT-VLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN---------MKIAFL 166 (692)
Q Consensus 97 ~l~i~~ls~~y~~~~-vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~---------~~i~~v 166 (692)
+|++.+++++|++.. +++||||+++.|+++||+|||||||||+|++|++++.|++|+|+++|.+ .+||.+
T Consensus 1 Ml~v~~l~K~y~~~v~AvrdVSF~ae~Gei~GlLG~NGAGKTT~LRmiatlL~P~~G~v~idg~d~~~~p~~vrr~IGVl 80 (245)
T COG4555 1 MLEVTDLTKSYGSKVQAVRDVSFEAEEGEITGLLGENGAGKTTLLRMIATLLIPDSGKVTIDGVDTVRDPSFVRRKIGVL 80 (245)
T ss_pred CeeeeehhhhccCHHhhhhheeEEeccceEEEEEcCCCCCchhHHHHHHHhccCCCceEEEeecccccChHHHhhhccee
Confidence 488999999999876 9999999999999999999999999999999999999999999998743 369999
Q ss_pred cccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHHhhhc
Q 005532 167 SQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPEL 246 (692)
Q Consensus 167 ~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~l 246 (692)
+-+..++..+|++|||.+ |... ..+...++++++.++.+.|
T Consensus 81 ~~e~glY~RlT~rEnl~~-Fa~L--------------------------------------~~l~~~~~kari~~l~k~l 121 (245)
T COG4555 81 FGERGLYARLTARENLKY-FARL--------------------------------------NGLSRKEIKARIAELSKRL 121 (245)
T ss_pred cCCcChhhhhhHHHHHHH-HHHH--------------------------------------hhhhhhHHHHHHHHHHHHh
Confidence 987888889999999864 2111 0122234577888999999
Q ss_pred CCCccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHH---ccCCCeEEEEecCHHHHHhhc
Q 005532 247 GFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYL---GKQDVPMVIISHDRAFLDQLC 323 (692)
Q Consensus 247 gl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L---~~~~~tvI~vsHd~~~l~~~~ 323 (692)
++. +..|+.+.+||-|+||||+|||||+++|++|||||||||||..+...+.+++ ++.|++||++||+++++..+|
T Consensus 122 ~l~-~~~~rRv~~~S~G~kqkV~iARAlvh~P~i~vlDEP~sGLDi~~~r~~~dfi~q~k~egr~viFSSH~m~EvealC 200 (245)
T COG4555 122 QLL-EYLDRRVGEFSTGMKQKVAIARALVHDPSILVLDEPTSGLDIRTRRKFHDFIKQLKNEGRAVIFSSHIMQEVEALC 200 (245)
T ss_pred ChH-HHHHHHHhhhchhhHHHHHHHHHHhcCCCeEEEcCCCCCccHHHHHHHHHHHHHhhcCCcEEEEecccHHHHHHhh
Confidence 996 6889999999999999999999999999999999999999999999988875 456999999999999999999
Q ss_pred CeEEEEecceEEEeccChHH
Q 005532 324 TKIVETEMGVSRTYEGNYSQ 343 (692)
Q Consensus 324 d~i~~l~~G~~~~~~G~y~~ 343 (692)
|+|++++.|++ .+.|+...
T Consensus 201 Drvivlh~Gev-v~~gs~~~ 219 (245)
T COG4555 201 DRVIVLHKGEV-VLEGSIEA 219 (245)
T ss_pred heEEEEecCcE-EEcCCHHH
Confidence 99999999997 67887543
No 76
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=1.2e-42 Score=369.37 Aligned_cols=205 Identities=28% Similarity=0.432 Sum_probs=175.1
Q ss_pred cEEEEeEEEEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC---------ceEEEEc
Q 005532 97 GVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN---------MKIAFLS 167 (692)
Q Consensus 97 ~l~i~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~---------~~i~~v~ 167 (692)
+|+++|++++|++.++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.+ ..|+|++
T Consensus 4 ~i~~~~l~~~~~~~~~l~~vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~i~~v~ 83 (303)
T TIGR01288 4 AIDLVGVSKSYGDKVVVNDLSFTIARGECFGLLGPNGAGKSTIARMLLGMISPDRGKITVLGEPVPSRARLARVAIGVVP 83 (303)
T ss_pred EEEEEeEEEEeCCeEEEcceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECcccHHHHhhcEEEEe
Confidence 5999999999998889999999999999999999999999999999999999999999998742 3599999
Q ss_pred ccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHHhhhcC
Q 005532 168 QEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELG 247 (692)
Q Consensus 168 Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lg 247 (692)
|++.+++..||.+|+.... .. . ..+......++.++++.+|
T Consensus 84 q~~~~~~~~tv~e~l~~~~-~~--------------~------------------------~~~~~~~~~~~~~ll~~~~ 124 (303)
T TIGR01288 84 QFDNLDPEFTVRENLLVFG-RY--------------F------------------------GMSTREIEAVIPSLLEFAR 124 (303)
T ss_pred ccccCCcCCcHHHHHHHHH-HH--------------c------------------------CCCHHHHHHHHHHHHHHCC
Confidence 9998878899999985210 00 0 0011112334566788888
Q ss_pred CCccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc---CCCeEEEEecCHHHHHhhcC
Q 005532 248 FTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK---QDVPMVIISHDRAFLDQLCT 324 (692)
Q Consensus 248 l~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~---~~~tvI~vsHd~~~l~~~~d 324 (692)
+. ...++++.+|||||||||+|||||+.+|++|||||||+|||+.+++++.++|++ .|.|||++|||++++..+||
T Consensus 125 l~-~~~~~~~~~LSgG~~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~til~~sH~~~~~~~~~d 203 (303)
T TIGR01288 125 LE-SKADVRVALLSGGMKRRLTLARALINDPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFMEEAERLCD 203 (303)
T ss_pred Ch-hHhcCchhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCC
Confidence 86 567888999999999999999999999999999999999999999999887753 58999999999999999999
Q ss_pred eEEEEecceEEEeccChH
Q 005532 325 KIVETEMGVSRTYEGNYS 342 (692)
Q Consensus 325 ~i~~l~~G~~~~~~G~y~ 342 (692)
+|+++++|++ .+.|...
T Consensus 204 ~i~~l~~G~i-~~~g~~~ 220 (303)
T TIGR01288 204 RLCVLESGRK-IAEGRPH 220 (303)
T ss_pred EEEEEECCEE-EEEcCHH
Confidence 9999999997 4567653
No 77
>COG1131 CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=1.4e-42 Score=365.74 Aligned_cols=207 Identities=30% Similarity=0.501 Sum_probs=177.7
Q ss_pred CcEEEEeEEEEeC-CeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC---------ceEEE
Q 005532 96 SGVKLENISKSYK-GVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN---------MKIAF 165 (692)
Q Consensus 96 ~~l~i~~ls~~y~-~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~---------~~i~~ 165 (692)
..++++|+++.|+ ++.+|+||||+|++|+++||+||||||||||+|+|+|++.|++|+|.++|.+ .+|||
T Consensus 3 ~~i~~~~l~k~~~~~~~~l~~vs~~i~~Gei~gllG~NGAGKTTllk~l~gl~~p~~G~i~i~G~~~~~~~~~~~~~igy 82 (293)
T COG1131 3 EVIEVRNLTKKYGGDKTALDGVSFEVEPGEIFGLLGPNGAGKTTLLKILAGLLKPTSGEILVLGYDVVKEPAKVRRRIGY 82 (293)
T ss_pred ceeeecceEEEeCCCCEEEeceeEEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCceEEEEcCEeCccCHHHHHhheEE
Confidence 3588999999999 6999999999999999999999999999999999999999999999998732 25999
Q ss_pred EcccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHHhhh
Q 005532 166 LSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPE 245 (692)
Q Consensus 166 v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~ 245 (692)
++|+|.+++.+|++||+.... .+.. ......++++.++++.
T Consensus 83 ~~~~~~~~~~lT~~e~l~~~~---------------~l~~------------------------~~~~~~~~~~~~~l~~ 123 (293)
T COG1131 83 VPQEPSLYPELTVRENLEFFA---------------RLYG------------------------LSKEEAEERIEELLEL 123 (293)
T ss_pred EccCCCCCccccHHHHHHHHH---------------HHhC------------------------CChhHHHHHHHHHHHH
Confidence 999999999999999984210 0000 0001234678899999
Q ss_pred cCCCccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc---CC-CeEEEEecCHHHHHh
Q 005532 246 LGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK---QD-VPMVIISHDRAFLDQ 321 (692)
Q Consensus 246 lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~---~~-~tvI~vsHd~~~l~~ 321 (692)
+|+.. ..++++.+||+|||||+.||.||+.+|+||||||||+|||+.++..+.++|++ .+ .|||++||.++.+..
T Consensus 124 ~~L~~-~~~~~~~~lS~G~kqrl~ia~aL~~~P~lliLDEPt~GLDp~~~~~~~~~l~~l~~~g~~tvlissH~l~e~~~ 202 (293)
T COG1131 124 FGLED-KANKKVRTLSGGMKQRLSIALALLHDPELLILDEPTSGLDPESRREIWELLRELAKEGGVTILLSTHILEEAEE 202 (293)
T ss_pred cCCch-hhCcchhhcCHHHHHHHHHHHHHhcCCCEEEECCCCcCCCHHHHHHHHHHHHHHHhCCCcEEEEeCCcHHHHHH
Confidence 99985 44788999999999999999999999999999999999999999999888753 45 799999999999999
Q ss_pred hcCeEEEEecceEEEeccChHH
Q 005532 322 LCTKIVETEMGVSRTYEGNYSQ 343 (692)
Q Consensus 322 ~~d~i~~l~~G~~~~~~G~y~~ 343 (692)
+||+|+++++|++ .+.|...+
T Consensus 203 ~~d~v~il~~G~~-~~~g~~~~ 223 (293)
T COG1131 203 LCDRVIILNDGKI-IAEGTPEE 223 (293)
T ss_pred hCCEEEEEeCCEE-EEeCCHHH
Confidence 9999999999998 45665443
No 78
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=1.1e-42 Score=351.20 Aligned_cols=199 Identities=30% Similarity=0.462 Sum_probs=170.6
Q ss_pred EEEEeEEEEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC--------ceEEEEccc
Q 005532 98 VKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN--------MKIAFLSQE 169 (692)
Q Consensus 98 l~i~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~--------~~i~~v~Q~ 169 (692)
|+++|++++|+++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.+ ..++|++|+
T Consensus 1 i~~~~l~~~~~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~v~~~g~~~~~~~~~~~~i~~~~q~ 80 (213)
T cd03301 1 VELENVTKRFGNVTALDDLNLDIADGEFVVLLGPSGCGKTTTLRMIAGLEEPTSGRIYIGGRDVTDLPPKDRDIAMVFQN 80 (213)
T ss_pred CEEEeeEEEECCeeeeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCcccceEEEEecC
Confidence 468999999998899999999999999999999999999999999999999999999998642 259999999
Q ss_pred CccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHHhhhcCCC
Q 005532 170 FEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFT 249 (692)
Q Consensus 170 ~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl~ 249 (692)
+.+++..|+++|+...... . ........+++.++++.+|+.
T Consensus 81 ~~~~~~~tv~~~l~~~~~~---------------~------------------------~~~~~~~~~~~~~~l~~~~l~ 121 (213)
T cd03301 81 YALYPHMTVYDNIAFGLKL---------------R------------------------KVPKDEIDERVREVAELLQIE 121 (213)
T ss_pred hhhccCCCHHHHHHHHHHh---------------c------------------------CCCHHHHHHHHHHHHHHcCCH
Confidence 9887788999998532100 0 001112234566778888986
Q ss_pred ccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc----CCCeEEEEecCHHHHHhhcCe
Q 005532 250 ADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVIISHDRAFLDQLCTK 325 (692)
Q Consensus 250 ~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~----~~~tvI~vsHd~~~l~~~~d~ 325 (692)
...++++.+||||||||++|||||+.+|++|||||||+|||+.+++++.++|++ .+.|||+||||++++..+||+
T Consensus 122 -~~~~~~~~~LS~G~~qr~~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~sH~~~~~~~~~d~ 200 (213)
T cd03301 122 -HLLDRKPKQLSGGQRQRVALGRAIVREPKVFLMDEPLSNLDAKLRVQMRAELKRLQQRLGTTTIYVTHDQVEAMTMADR 200 (213)
T ss_pred -HHHhCChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCe
Confidence 567889999999999999999999999999999999999999999999887753 489999999999999999999
Q ss_pred EEEEecceEEE
Q 005532 326 IVETEMGVSRT 336 (692)
Q Consensus 326 i~~l~~G~~~~ 336 (692)
|+++++|++..
T Consensus 201 i~~l~~g~~~~ 211 (213)
T cd03301 201 IAVMNDGQIQQ 211 (213)
T ss_pred EEEEECCEEEe
Confidence 99999998753
No 79
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=2.1e-42 Score=375.15 Aligned_cols=209 Identities=27% Similarity=0.412 Sum_probs=180.4
Q ss_pred CCCcEEEEeEEEEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC--------ceEEE
Q 005532 94 ISSGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN--------MKIAF 165 (692)
Q Consensus 94 ~~~~l~i~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~--------~~i~~ 165 (692)
.++.|+++|++++|++.++|+++||+|++|++++|+|||||||||||++|+|+++|++|+|.++|.. ..|+|
T Consensus 11 ~~~~L~l~~l~~~~~~~~~l~~vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~~r~ig~ 90 (375)
T PRK09452 11 LSPLVELRGISKSFDGKEVISNLDLTINNGEFLTLLGPSGCGKTTVLRLIAGFETPDSGRIMLDGQDITHVPAENRHVNT 90 (375)
T ss_pred CCceEEEEEEEEEECCeEEEeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHHHCCEEE
Confidence 4556999999999998889999999999999999999999999999999999999999999998753 35999
Q ss_pred EcccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHHhhh
Q 005532 166 LSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPE 245 (692)
Q Consensus 166 v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~ 245 (692)
++|++.+++.+||.||+...+.. ...+......++.++++.
T Consensus 91 vfQ~~~lfp~ltv~eNi~~~l~~---------------------------------------~~~~~~~~~~~~~~~l~~ 131 (375)
T PRK09452 91 VFQSYALFPHMTVFENVAFGLRM---------------------------------------QKTPAAEITPRVMEALRM 131 (375)
T ss_pred EecCcccCCCCCHHHHHHHHHhh---------------------------------------cCCCHHHHHHHHHHHHHH
Confidence 99999999999999998643210 001112234567788899
Q ss_pred cCCCccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHc----cCCCeEEEEecCHHHHHh
Q 005532 246 LGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG----KQDVPMVIISHDRAFLDQ 321 (692)
Q Consensus 246 lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~----~~~~tvI~vsHd~~~l~~ 321 (692)
+|+. ...++++.+|||||||||+|||||+.+|+||||||||++||+.+++++.+.|+ +.+.|+|+||||.+++..
T Consensus 132 ~~l~-~~~~~~p~~LSgGq~QRVaLARaL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tiI~vTHd~~ea~~ 210 (375)
T PRK09452 132 VQLE-EFAQRKPHQLSGGQQQRVAIARAVVNKPKVLLLDESLSALDYKLRKQMQNELKALQRKLGITFVFVTHDQEEALT 210 (375)
T ss_pred cCCc-hhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHH
Confidence 9996 67899999999999999999999999999999999999999999999987764 358999999999999999
Q ss_pred hcCeEEEEecceEEEeccChHH
Q 005532 322 LCTKIVETEMGVSRTYEGNYSQ 343 (692)
Q Consensus 322 ~~d~i~~l~~G~~~~~~G~y~~ 343 (692)
+||+|++|++|++. ..|...+
T Consensus 211 laDri~vl~~G~i~-~~g~~~~ 231 (375)
T PRK09452 211 MSDRIVVMRDGRIE-QDGTPRE 231 (375)
T ss_pred hCCEEEEEECCEEE-EEcCHHH
Confidence 99999999999984 4565543
No 80
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=8.6e-43 Score=353.16 Aligned_cols=195 Identities=30% Similarity=0.501 Sum_probs=166.3
Q ss_pred EEEEeEEEEeCC----eeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC-------------
Q 005532 98 VKLENISKSYKG----VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN------------- 160 (692)
Q Consensus 98 l~i~~ls~~y~~----~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~------------- 160 (692)
|+++|++++|++ +++|+++||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.+
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~~s~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~ 80 (218)
T cd03255 1 IELKNLSKTYGGGGEKVQALKGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDRPTSGEVRVDGTDISKLSEKELAAFR 80 (218)
T ss_pred CeEeeeEEEecCCCcceeEEeeeEEEEcCCCEEEEEcCCCCCHHHHHHHHhCCcCCCceeEEECCEehhhcchhHHHHHH
Confidence 468999999986 689999999999999999999999999999999999999999999998632
Q ss_pred -ceEEEEcccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHH
Q 005532 161 -MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKV 239 (692)
Q Consensus 161 -~~i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 239 (692)
..++|++|++.+++..||.||+...... . ........+++
T Consensus 81 ~~~i~~~~q~~~~~~~~tv~e~l~~~~~~---------------~------------------------~~~~~~~~~~~ 121 (218)
T cd03255 81 RRHIGFVFQSFNLLPDLTALENVELPLLL---------------A------------------------GVPKKERRERA 121 (218)
T ss_pred hhcEEEEeeccccCCCCcHHHHHHHHHhh---------------c------------------------CCCHHHHHHHH
Confidence 2599999999887788999998532100 0 00011123456
Q ss_pred HHHhhhcCCCccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc----CCCeEEEEecC
Q 005532 240 SKLMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVIISHD 315 (692)
Q Consensus 240 ~~ll~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~----~~~tvI~vsHd 315 (692)
.++++.+|+. ...++++.+|||||||||+|||||+.+|+||||||||++||+.+++++.++|++ .++|||+||||
T Consensus 122 ~~~l~~~~l~-~~~~~~~~~LS~G~~qrv~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~ 200 (218)
T cd03255 122 EELLERVGLG-DRLNHYPSELSGGQQQRVAIARALANDPKIILADEPTGNLDSETGKEVMELLRELNKEAGTTIVVVTHD 200 (218)
T ss_pred HHHHHHcCCc-hhhhcChhhcCHHHHHHHHHHHHHccCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEECC
Confidence 6788889996 456888999999999999999999999999999999999999999999887753 47899999999
Q ss_pred HHHHHhhcCeEEEEecce
Q 005532 316 RAFLDQLCTKIVETEMGV 333 (692)
Q Consensus 316 ~~~l~~~~d~i~~l~~G~ 333 (692)
++++. +||+++++++|+
T Consensus 201 ~~~~~-~~d~v~~l~~G~ 217 (218)
T cd03255 201 PELAE-YADRIIELRDGK 217 (218)
T ss_pred HHHHh-hhcEEEEeeCCc
Confidence 99997 999999999886
No 81
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-42 Score=376.54 Aligned_cols=206 Identities=27% Similarity=0.426 Sum_probs=177.2
Q ss_pred cEEEEeEEEEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC--------ceEEEEcc
Q 005532 97 GVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN--------MKIAFLSQ 168 (692)
Q Consensus 97 ~l~i~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~--------~~i~~v~Q 168 (692)
.|+++|++++|+++++|+|+||+|++|++++|+|||||||||||++|+|+++|++|+|.++|.. ..|+|++|
T Consensus 3 ~l~i~~l~~~~~~~~vl~~vsl~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~p~~G~I~~~g~~i~~~~~~~~~i~~v~Q 82 (369)
T PRK11000 3 SVTLRNVTKAYGDVVISKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLEDITSGDLFIGEKRMNDVPPAERGVGMVFQ 82 (369)
T ss_pred EEEEEEEEEEeCCeEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHhHCCEEEEeC
Confidence 5999999999998889999999999999999999999999999999999999999999998742 25999999
Q ss_pred cCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHHhhhcCC
Q 005532 169 EFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGF 248 (692)
Q Consensus 169 ~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl 248 (692)
++.+++..||++|+...... . .........++.++++.+|+
T Consensus 83 ~~~l~~~~tv~eni~~~~~~---------------~------------------------~~~~~~~~~~~~~~l~~lgL 123 (369)
T PRK11000 83 SYALYPHLSVAENMSFGLKL---------------A------------------------GAKKEEINQRVNQVAEVLQL 123 (369)
T ss_pred CcccCCCCCHHHHHHhHHhh---------------c------------------------CCCHHHHHHHHHHHHHHcCC
Confidence 99988899999998532110 0 01111234567788899999
Q ss_pred CccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc----CCCeEEEEecCHHHHHhhcC
Q 005532 249 TADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVIISHDRAFLDQLCT 324 (692)
Q Consensus 249 ~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~----~~~tvI~vsHd~~~l~~~~d 324 (692)
. ...++++.+|||||||||+|||||+.+|+||||||||++||+.+++.+.+.|++ .+.|+|+||||++++..+||
T Consensus 124 ~-~~~~~~~~~LSgGq~QRvaLAraL~~~P~lLLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tvI~vTHd~~~~~~~~d 202 (369)
T PRK11000 124 A-HLLDRKPKALSGGQRQRVAIGRTLVAEPSVFLLDEPLSNLDAALRVQMRIEISRLHKRLGRTMIYVTHDQVEAMTLAD 202 (369)
T ss_pred h-hhhcCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHhCCEEEEEeCCHHHHHHhCC
Confidence 6 577899999999999999999999999999999999999999999988877643 48999999999999999999
Q ss_pred eEEEEecceEEEeccChHH
Q 005532 325 KIVETEMGVSRTYEGNYSQ 343 (692)
Q Consensus 325 ~i~~l~~G~~~~~~G~y~~ 343 (692)
+|++|++|++. ..|...+
T Consensus 203 ~i~vl~~G~i~-~~g~~~~ 220 (369)
T PRK11000 203 KIVVLDAGRVA-QVGKPLE 220 (369)
T ss_pred EEEEEECCEEE-EEcCHHH
Confidence 99999999984 4566543
No 82
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2e-42 Score=355.57 Aligned_cols=209 Identities=29% Similarity=0.446 Sum_probs=174.3
Q ss_pred cEEEEeEEEEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC--------ceEEEEcc
Q 005532 97 GVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN--------MKIAFLSQ 168 (692)
Q Consensus 97 ~l~i~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~--------~~i~~v~Q 168 (692)
.|+++|++++|+++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.+ ..|+|++|
T Consensus 2 ~l~~~~l~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~i~~v~q 81 (239)
T cd03296 2 SIEVRNVSKRFGDFVALDDVSLDIPSGELVALLGPSGSGKTTLLRLIAGLERPDSGTILFGGEDATDVPVQERNVGFVFQ 81 (239)
T ss_pred EEEEEeEEEEECCEEeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCccccceEEEec
Confidence 4899999999998889999999999999999999999999999999999999999999998742 25999999
Q ss_pred cCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHHhhhcCC
Q 005532 169 EFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGF 248 (692)
Q Consensus 169 ~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl 248 (692)
++.+++..||.+|+....... ... ...+......++.++++.+|+
T Consensus 82 ~~~~~~~~tv~e~l~~~~~~~---------------~~~--------------------~~~~~~~~~~~~~~~l~~~~l 126 (239)
T cd03296 82 HYALFRHMTVFDNVAFGLRVK---------------PRS--------------------ERPPEAEIRAKVHELLKLVQL 126 (239)
T ss_pred CCcccCCCCHHHHHhhhhhhc---------------ccc--------------------ccCCHHHHHHHHHHHHHHcCC
Confidence 998877889999985321100 000 000001123456677888898
Q ss_pred CccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc----CCCeEEEEecCHHHHHhhcC
Q 005532 249 TADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVIISHDRAFLDQLCT 324 (692)
Q Consensus 249 ~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~----~~~tvI~vsHd~~~l~~~~d 324 (692)
. ...++++.+|||||||||+|||||+.+|+||||||||++||+.+++++.++|++ .++|||+||||++++..+||
T Consensus 127 ~-~~~~~~~~~LS~G~~qrl~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~~~~~~~d 205 (239)
T cd03296 127 D-WLADRYPAQLSGGQRQRVALARALAVEPKVLLLDEPFGALDAKVRKELRRWLRRLHDELHVTTVFVTHDQEEALEVAD 205 (239)
T ss_pred h-hhhhcChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCC
Confidence 6 567888999999999999999999999999999999999999999999887753 37899999999999999999
Q ss_pred eEEEEecceEEEeccChH
Q 005532 325 KIVETEMGVSRTYEGNYS 342 (692)
Q Consensus 325 ~i~~l~~G~~~~~~G~y~ 342 (692)
+|+++++|++. +.|...
T Consensus 206 ~i~~l~~G~i~-~~~~~~ 222 (239)
T cd03296 206 RVVVMNKGRIE-QVGTPD 222 (239)
T ss_pred EEEEEECCeEE-EecCHH
Confidence 99999999974 556543
No 83
>TIGR00630 uvra excinuclease ABC, A subunit. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=100.00 E-value=1.3e-41 Score=400.73 Aligned_cols=327 Identities=24% Similarity=0.309 Sum_probs=227.5
Q ss_pred HhhhcCCCccccccccccCChHHHHHHHHHHHHccCC--CeEEEcCCCCCCCHHHHHHHHHHHc---cCCCeEEEEecCH
Q 005532 242 LMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDP--DLLLLDEPTNHLDLDTIEWLEGYLG---KQDVPMVIISHDR 316 (692)
Q Consensus 242 ll~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p--~lLLLDEPts~LD~~~~~~L~~~L~---~~~~tvI~vsHd~ 316 (692)
.|..+|+....+++++.+|||||+|||+||++|+.+| ++|||||||+|||+..+++|.++|+ +.|.|||+|+||+
T Consensus 470 ~L~~vgL~~l~l~r~~~tLSGGE~QRv~LA~aL~~~~~~~llILDEPtagLD~~~~~~L~~~L~~L~~~G~TVIvVeHd~ 549 (924)
T TIGR00630 470 FLIDVGLDYLTLSRAAGTLSGGEAQRIRLATQIGSGLTGVLYVLDEPSIGLHQRDNERLINTLKRLRDLGNTVIVVEHDE 549 (924)
T ss_pred hHhhccccccccCCCcCcCCHHHHHHHHHHHHHhhCCCCcEEEEcCCccCCCHHHHHHHHHHHHHHHhCCCEEEEEECCH
Confidence 3677888532368999999999999999999999986 8999999999999999999988764 4689999999999
Q ss_pred HHHHhhcCeEEEE------ecceEEEeccChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchhhhHHHH
Q 005532 317 AFLDQLCTKIVET------EMGVSRTYEGNYSQYVLEKAAWIESQYAAWEKQQREIEQTKDLINRLGAGANSGRASSAEK 390 (692)
Q Consensus 317 ~~l~~~~d~i~~l------~~G~~~~~~G~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~ 390 (692)
+++. .||+|++| ++|++ .+.|.+.++..... .....+.. +..
T Consensus 550 ~~i~-~aD~vi~LgpgaG~~~G~I-v~~g~~~el~~~~~---------------------~lt~~~l~----~~~----- 597 (924)
T TIGR00630 550 ETIR-AADYVIDIGPGAGIHGGEV-VASGTPEEILANPD---------------------SLTGQYLS----GKK----- 597 (924)
T ss_pred HHHh-hCCEEEEecccccCCCCEE-eeccCHHHHhcCch---------------------heeeeccc----ccc-----
Confidence 9986 89999999 78876 56676543211000 00000000 000
Q ss_pred HHHHHHHHhhhcccccccceeeecCCCCCCCCceEEEEeEEEEcCCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHH
Q 005532 391 KLERLQEEEQIEKPFQRKQMKIRFPERGRSGRSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLI 470 (692)
Q Consensus 391 ~l~rl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L 470 (692)
....+. .......+.|+++|++. ..|+++||+|+.|++++|+|+||||||||++-.
T Consensus 598 ---------~~~~~~----------~~~~~~~~~l~l~~~~~-----~~Lk~vsl~Ip~Geiv~VtGvsGSGKSTLl~~~ 653 (924)
T TIGR00630 598 ---------KIEVPK----------ERRPGNGKFLTLKGARE-----NNLKNITVSIPLGLFTCITGVSGSGKSTLINDT 653 (924)
T ss_pred ---------cccccc----------cccCCCcceEEEEeCcc-----CCcCceEEEEeCCCEEEEECCCCCCHHHHHHHH
Confidence 000000 00011234699999873 359999999999999999999999999999822
Q ss_pred h---------c-CCCCC-----ee------EEEECCccce---------------------------------eeeeccc
Q 005532 471 M---------G-LEKPR-----GG------EVLLGEHNVL---------------------------------PNYFEQN 496 (692)
Q Consensus 471 ~---------g-~~~p~-----~G------~i~~~~~~~~---------------------------------~~~~~q~ 496 (692)
. + ..+|. .| .|.++..++. .+.|..|
T Consensus 654 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~vdQ~pi~~~~RS~~aTy~~~~d~iR~lfa~~~~a~~~g~~~~~FSfN 733 (924)
T TIGR00630 654 LYPALARRLNGAKTQPGRYKSIEGLEHLDKVIHIDQSPIGRTPRSNPATYTGVFDEIRELFAETPEAKARGYTPGRFSFN 733 (924)
T ss_pred HHHHHHHHhcccccCCCCcCccccccCCCceEEEecCCCCCCCCCchhhhhhhHHHHHHHHhcCCccccCCCChhhcCCC
Confidence 2 1 11110 11 1333322110 0011111
Q ss_pred ch-------------------------------------h-----------hcCCCccHHHHHHHHhccccHHHHHHHHh
Q 005532 497 QA-------------------------------------E-----------ALDLDKTVLETVAEAAEDWRIDDIKGLLG 528 (692)
Q Consensus 497 ~~-------------------------------------~-----------~l~~~~tv~e~~~~~~~~~~~~~~~~~L~ 528 (692)
.. + .-..++|+.|.+..............+|.
T Consensus 734 ~~~G~C~~C~G~G~~~~~~~f~~~~~~~C~~C~G~R~~~e~l~v~~~g~~i~dvl~~tv~e~~~f~~~~~~i~~~l~~L~ 813 (924)
T TIGR00630 734 VKGGRCEACQGDGVIKIEMHFLPDVYVPCEVCKGKRYNRETLEVKYKGKNIADVLDMTVEEAYEFFEAVPSISRKLQTLC 813 (924)
T ss_pred CCCCCCCCCccceEEEEEccCCCCcccCCCCcCCceeChHHHhceeCCCCHHHHhCCcHHHHHHHHHhccchhHHHHHHH
Confidence 00 0 00012344444443322222334567888
Q ss_pred hcCCCcccccccCCCCCHHHHHHHHHHHHhcc---CCcEEEEeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHH
Q 005532 529 RCNFKADMLDRKVSLLSGGEKARLAFCKFMVK---PSTLLVLDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYF 602 (692)
Q Consensus 529 ~~~l~~~~~~~~~~~LSgGqkqrv~LAral~~---~p~lLlLDEPTn~LD~~~~~~l~~~l~~~---~~tviivSHd~~~ 602 (692)
.+|+....+++++.+|||||+|||.||++|+. +|+|+||||||++||+.++..|.+.|.++ +.|||+||||+++
T Consensus 814 ~~gL~~l~l~~~~~tLSgGe~QRl~LA~aL~~~~~~p~llILDEPtsgLD~~~~~~L~~~L~~l~~~G~TVIvi~H~~~~ 893 (924)
T TIGR00630 814 DVGLGYIKLGQPATTLSGGEAQRIKLAKELSKRSTGRTLYILDEPTTGLHFDDIKKLLEVLQRLVDQGNTVVVIEHNLDV 893 (924)
T ss_pred HcCCCchhhcCccccCCHHHHHHHHHHHHHhhcCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHH
Confidence 89995435789999999999999999999997 59999999999999999999999999866 4699999999999
Q ss_pred HHhhccEEEEE------ECCEEEEecCChh
Q 005532 603 VKQIVNRVVEV------KGSNLQDYAGDYN 626 (692)
Q Consensus 603 l~~~~d~i~~l------~~g~l~~~~g~~~ 626 (692)
+. .||+|++| ++|+++ +.|..+
T Consensus 894 i~-~aD~ii~Lgp~~G~~gG~iv-~~G~~~ 921 (924)
T TIGR00630 894 IK-TADYIIDLGPEGGDGGGTIV-ASGTPE 921 (924)
T ss_pred HH-hCCEEEEecCCccCCCCEEE-EeCCHH
Confidence 96 59999999 688887 456544
No 84
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=2.3e-42 Score=361.26 Aligned_cols=210 Identities=21% Similarity=0.321 Sum_probs=176.4
Q ss_pred CCcEEEEeEEEEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC-------------c
Q 005532 95 SSGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN-------------M 161 (692)
Q Consensus 95 ~~~l~i~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~-------------~ 161 (692)
+.+|+++|++++|+++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.+ .
T Consensus 5 ~~~l~~~~l~~~~~~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~~ 84 (269)
T PRK11831 5 ANLVDMRGVSFTRGNRCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIAPDHGEILFDGENIPAMSRSRLYTVRK 84 (269)
T ss_pred cceEEEeCeEEEECCEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccChhhHHHHhh
Confidence 356999999999998889999999999999999999999999999999999999999999998732 2
Q ss_pred eEEEEcccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHH
Q 005532 162 KIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSK 241 (692)
Q Consensus 162 ~i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 241 (692)
.|+|++|++.+++..|+.+|+...+... . ..+......++.+
T Consensus 85 ~i~~v~q~~~~~~~~tv~enl~~~~~~~--------------~------------------------~~~~~~~~~~~~~ 126 (269)
T PRK11831 85 RMSMLFQSGALFTDMNVFDNVAYPLREH--------------T------------------------QLPAPLLHSTVMM 126 (269)
T ss_pred cEEEEecccccCCCCCHHHHHHHHHHHc--------------c------------------------CCCHHHHHHHHHH
Confidence 4999999998877889999985321100 0 0000111234567
Q ss_pred HhhhcCCCccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc----CCCeEEEEecCHH
Q 005532 242 LMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVIISHDRA 317 (692)
Q Consensus 242 ll~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~----~~~tvI~vsHd~~ 317 (692)
+++.+|+. ...++++.+|||||||||+|||||+.+|++|||||||++||+.+++.+.++|++ .+.|||+||||++
T Consensus 127 ~l~~~gl~-~~~~~~~~~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~ 205 (269)
T PRK11831 127 KLEAVGLR-GAAKLMPSELSGGMARRAALARAIALEPDLIMFDEPFVGQDPITMGVLVKLISELNSALGVTCVVVSHDVP 205 (269)
T ss_pred HHHHcCCh-hhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHH
Confidence 78888986 567888999999999999999999999999999999999999999999887753 3789999999999
Q ss_pred HHHhhcCeEEEEecceEEEeccChHHH
Q 005532 318 FLDQLCTKIVETEMGVSRTYEGNYSQY 344 (692)
Q Consensus 318 ~l~~~~d~i~~l~~G~~~~~~G~y~~~ 344 (692)
++..+||+|+++++|++. +.|...++
T Consensus 206 ~~~~~~d~v~~l~~G~i~-~~g~~~~~ 231 (269)
T PRK11831 206 EVLSIADHAYIVADKKIV-AHGSAQAL 231 (269)
T ss_pred HHHHhhCEEEEEECCEEE-EeCCHHHH
Confidence 999999999999999984 56765443
No 85
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=100.00 E-value=1.5e-42 Score=350.50 Aligned_cols=196 Identities=29% Similarity=0.513 Sum_probs=167.9
Q ss_pred EEEEeEEEEeC-CeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC-------------ceE
Q 005532 98 VKLENISKSYK-GVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN-------------MKI 163 (692)
Q Consensus 98 l~i~~ls~~y~-~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~-------------~~i 163 (692)
|+++|++++|+ ++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.+ ..+
T Consensus 2 l~~~~l~~~~~~~~~il~~is~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~i 81 (214)
T TIGR02673 2 IEFHNVSKAYPGGVAALHDVSLHIRKGEFLFLTGPSGAGKTTLLKLLYGALTPSRGQVRIAGEDVNRLRGRQLPLLRRRI 81 (214)
T ss_pred EEEEeeeEEeCCCceeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHHHhhe
Confidence 78999999994 6789999999999999999999999999999999999999999999998732 259
Q ss_pred EEEcccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHHh
Q 005532 164 AFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLM 243 (692)
Q Consensus 164 ~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll 243 (692)
+|++|++.+++..|+.+|+...... . .......+.++.+++
T Consensus 82 ~~~~q~~~~~~~~tv~~~l~~~~~~---------------~------------------------~~~~~~~~~~~~~~l 122 (214)
T TIGR02673 82 GVVFQDFRLLPDRTVYENVALPLEV---------------R------------------------GKKEREIQRRVGAAL 122 (214)
T ss_pred EEEecChhhccCCcHHHHHHHHHHH---------------c------------------------CCCHHHHHHHHHHHH
Confidence 9999999887788999998532100 0 001112234566788
Q ss_pred hhcCCCccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc---CCCeEEEEecCHHHHH
Q 005532 244 PELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK---QDVPMVIISHDRAFLD 320 (692)
Q Consensus 244 ~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~---~~~tvI~vsHd~~~l~ 320 (692)
+.+|+. +..++++.+|||||||||+|||||+.+|++|||||||++||+.++.++.++|++ .++|||+|||+++++.
T Consensus 123 ~~~~l~-~~~~~~~~~LS~G~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~ 201 (214)
T TIGR02673 123 RQVGLE-HKADAFPEQLSGGEQQRVAIARAIVNSPPLLLADEPTGNLDPDLSERILDLLKRLNKRGTTVIVATHDLSLVD 201 (214)
T ss_pred HHcCCh-hhhhCChhhCCHHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHH
Confidence 888986 467888999999999999999999999999999999999999999999888753 5899999999999999
Q ss_pred hhcCeEEEEecce
Q 005532 321 QLCTKIVETEMGV 333 (692)
Q Consensus 321 ~~~d~i~~l~~G~ 333 (692)
.+||+|+++++|+
T Consensus 202 ~~~d~i~~l~~G~ 214 (214)
T TIGR02673 202 RVAHRVIILDDGR 214 (214)
T ss_pred HhcCEEEEecCCC
Confidence 9999999998874
No 86
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.2e-42 Score=350.84 Aligned_cols=198 Identities=31% Similarity=0.429 Sum_probs=169.0
Q ss_pred EEEEeEEEEeCC----eeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC-----ceEEEEcc
Q 005532 98 VKLENISKSYKG----VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN-----MKIAFLSQ 168 (692)
Q Consensus 98 l~i~~ls~~y~~----~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~-----~~i~~v~Q 168 (692)
|+++|++++|++ +++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.+ ..++|++|
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~i~~v~q 80 (220)
T cd03293 1 LEVRNVSKTYGGGGGAVTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLERPTSGEVLVDGEPVTGPGPDRGYVFQ 80 (220)
T ss_pred CeEEEEEEEcCCCCcceEEEeceeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECccccCcEEEEec
Confidence 468999999987 789999999999999999999999999999999999999999999998743 36999999
Q ss_pred cCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHHhhhcCC
Q 005532 169 EFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGF 248 (692)
Q Consensus 169 ~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl 248 (692)
++.+++..|+.+|+...... . .........++.++++.+|+
T Consensus 81 ~~~~~~~~tv~e~l~~~~~~---------------~------------------------~~~~~~~~~~~~~~l~~~~l 121 (220)
T cd03293 81 QDALLPWLTVLDNVALGLEL---------------Q------------------------GVPKAEARERAEELLELVGL 121 (220)
T ss_pred ccccccCCCHHHHHHHHHHH---------------c------------------------CCCHHHHHHHHHHHHHHcCC
Confidence 99887778999998532100 0 00011123456678888898
Q ss_pred CccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc----CCCeEEEEecCHHHHHhhcC
Q 005532 249 TADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVIISHDRAFLDQLCT 324 (692)
Q Consensus 249 ~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~----~~~tvI~vsHd~~~l~~~~d 324 (692)
. ...++++.+||||||||++|||||+.+|++|||||||++||+.+++++.++|++ .+.|||+|||+++++..+||
T Consensus 122 ~-~~~~~~~~~LSgG~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~~~~~~~d 200 (220)
T cd03293 122 S-GFENAYPHQLSGGMRQRVALARALAVDPDVLLLDEPFSALDALTREQLQEELLDIWRETGKTVLLVTHDIDEAVFLAD 200 (220)
T ss_pred h-hhhhCCcccCCHHHHHHHHHHHHHHcCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhCC
Confidence 6 467888999999999999999999999999999999999999999999887753 47899999999999999999
Q ss_pred eEEEEe--cceEE
Q 005532 325 KIVETE--MGVSR 335 (692)
Q Consensus 325 ~i~~l~--~G~~~ 335 (692)
+|++++ +|++.
T Consensus 201 ~i~~l~~~~G~i~ 213 (220)
T cd03293 201 RVVVLSARPGRIV 213 (220)
T ss_pred EEEEEECCCCEEE
Confidence 999999 68873
No 87
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=2.4e-42 Score=343.75 Aligned_cols=193 Identities=35% Similarity=0.511 Sum_probs=167.4
Q ss_pred eEEEEeEEEEcCC----eecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccce----------
Q 005532 424 VVTIKNLEFGYED----RLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL---------- 489 (692)
Q Consensus 424 ~l~~~~l~~~y~~----~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~~---------- 489 (692)
+++++||++.|+. ..+|+++||+|++||+++|+||+||||||||++|.|+..|++|.|.++|.++.
T Consensus 1 ~i~~~~v~k~y~~~~~~~~~L~~v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~pt~G~v~i~g~d~~~l~~~~~~~~ 80 (226)
T COG1136 1 MIELKNVSKIYGLGGEKVEALKDVNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDKPTSGEVLINGKDLTKLSEKELAKL 80 (226)
T ss_pred CcEEeeeEEEeccCCcceEecccceEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCceEEECCEEcCcCCHHHHHHH
Confidence 4689999999964 36899999999999999999999999999999999999999999999986652
Q ss_pred ----eeeecccchhhcCCCccHHHHHHHHhc---cc---cHHHHHHHHhhcCCCcccccccCCCCCHHHHHHHHHHHHhc
Q 005532 490 ----PNYFEQNQAEALDLDKTVLETVAEAAE---DW---RIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMV 559 (692)
Q Consensus 490 ----~~~~~q~~~~~l~~~~tv~e~~~~~~~---~~---~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~LAral~ 559 (692)
.++++|+ .++.+.+|+.||+..... .. ....+..+++.+|+.....+++|.+|||||||||||||||+
T Consensus 81 R~~~iGfvFQ~--~nLl~~ltv~ENv~lpl~~~~~~~~~~~~~~~~l~~~lgl~~~~~~~~p~eLSGGqqQRVAIARAL~ 158 (226)
T COG1136 81 RRKKIGFVFQN--FNLLPDLTVLENVELPLLIAGKSAGRRKRAAEELLEVLGLEDRLLKKKPSELSGGQQQRVAIARALI 158 (226)
T ss_pred HHHhEEEECcc--CCCCCCCCHHHHHHhHHHHcCCChhHHHHHHHHHHHhcCChhhhccCCchhcCHHHHHHHHHHHHHh
Confidence 4677765 578899999999985421 11 23457788999999655555889999999999999999999
Q ss_pred cCCcEEEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEECCEEE
Q 005532 560 KPSTLLVLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQ 619 (692)
Q Consensus 560 ~~p~lLlLDEPTn~LD~~~~~~l~~~l~~~----~~tviivSHd~~~l~~~~d~i~~l~~g~l~ 619 (692)
.+|+|||.||||.+||.++.+.+.++|.+. +.||||||||...+. +|||++.|.+|++.
T Consensus 159 ~~P~iilADEPTgnLD~~t~~~V~~ll~~~~~~~g~tii~VTHd~~lA~-~~dr~i~l~dG~~~ 221 (226)
T COG1136 159 NNPKIILADEPTGNLDSKTAKEVLELLRELNKERGKTIIMVTHDPELAK-YADRVIELKDGKIE 221 (226)
T ss_pred cCCCeEEeeCccccCChHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHH-hCCEEEEEeCCeee
Confidence 999999999999999999999999998865 459999999999886 59999999999854
No 88
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.7e-42 Score=347.56 Aligned_cols=198 Identities=28% Similarity=0.515 Sum_probs=170.4
Q ss_pred EEEEeEEEEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC------ceEEEEcccCc
Q 005532 98 VKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN------MKIAFLSQEFE 171 (692)
Q Consensus 98 l~i~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~------~~i~~v~Q~~~ 171 (692)
|+++|+++.|+++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.+ ..++|++|++.
T Consensus 1 l~~~~l~~~~~~~~~l~~v~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~i~~~~q~~~ 80 (210)
T cd03269 1 LEVENVTKRFGRVTALDDISFSVEKGEIFGLLGPNGAGKTTTIRMILGIILPDSGEVLFDGKPLDIAARNRIGYLPEERG 80 (210)
T ss_pred CEEEEEEEEECCEEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCCchhHHHHccEEEeccCCc
Confidence 468999999998889999999999999999999999999999999999999999999998754 35999999998
Q ss_pred cCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHHhhhcCCCcc
Q 005532 172 VSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFTAD 251 (692)
Q Consensus 172 ~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl~~~ 251 (692)
+++..|+.||+..... .. .........++.++++.+|+. .
T Consensus 81 ~~~~~tv~e~l~~~~~---------------~~------------------------~~~~~~~~~~~~~~l~~~~l~-~ 120 (210)
T cd03269 81 LYPKMKVIDQLVYLAQ---------------LK------------------------GLKKEEARRRIDEWLERLELS-E 120 (210)
T ss_pred CCcCCcHHHHHHHHHH---------------Hc------------------------CCChHHHHHHHHHHHHHcCCh-H
Confidence 8778899999752100 00 001112234566788888986 4
Q ss_pred ccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc---CCCeEEEEecCHHHHHhhcCeEEE
Q 005532 252 DGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK---QDVPMVIISHDRAFLDQLCTKIVE 328 (692)
Q Consensus 252 ~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~---~~~tvI~vsHd~~~l~~~~d~i~~ 328 (692)
..++++.+|||||||||+|||||+.+|++|||||||++||+.+++++.++|++ .+.|||++|||++++..+||++++
T Consensus 121 ~~~~~~~~LS~G~~qrl~la~al~~~p~~lllDEP~~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~ 200 (210)
T cd03269 121 YANKRVEELSKGNQQKVQFIAAVIHDPELLILDEPFSGLDPVNVELLKDVIRELARAGKTVILSTHQMELVEELCDRVLL 200 (210)
T ss_pred HHhCcHhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHhhhEEEE
Confidence 67788999999999999999999999999999999999999999999887753 478999999999999999999999
Q ss_pred EecceEE
Q 005532 329 TEMGVSR 335 (692)
Q Consensus 329 l~~G~~~ 335 (692)
+++|++.
T Consensus 201 l~~g~i~ 207 (210)
T cd03269 201 LNKGRAV 207 (210)
T ss_pred EeCCEEE
Confidence 9999874
No 89
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=3e-42 Score=372.69 Aligned_cols=207 Identities=26% Similarity=0.424 Sum_probs=179.4
Q ss_pred cEEEEeEEEEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCc--cEEEECCCC--------ceEEEE
Q 005532 97 GVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDS--GNVIKAKSN--------MKIAFL 166 (692)
Q Consensus 97 ~l~i~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~--G~I~~~~~~--------~~i~~v 166 (692)
.|+++|++++|++..+|+|+||+|++|++++|+|||||||||||++|+|+++|++ |+|.++|.. ..|+|+
T Consensus 5 ~l~~~~l~~~~~~~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~p~~~~G~i~~~g~~~~~~~~~~r~ig~v 84 (362)
T TIGR03258 5 GIRIDHLRVAYGANTVLDDLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVKAAGLTGRIAIADRDLTHAPPHKRGLALL 84 (362)
T ss_pred EEEEEEEEEEECCeEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCEEEEECCEECCCCCHHHCCEEEE
Confidence 3899999999998889999999999999999999999999999999999999999 999998743 359999
Q ss_pred cccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHHhhhc
Q 005532 167 SQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPEL 246 (692)
Q Consensus 167 ~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~l 246 (692)
+|++.+++.+||+||+...+.. ..........++.++++.+
T Consensus 85 fQ~~~l~p~~tv~enl~~~l~~---------------------------------------~~~~~~~~~~~v~~~l~~~ 125 (362)
T TIGR03258 85 FQNYALFPHLKVEDNVAFGLRA---------------------------------------QKMPKADIAERVADALKLV 125 (362)
T ss_pred ECCcccCCCCcHHHHHHHHHHH---------------------------------------cCCCHHHHHHHHHHHHHhc
Confidence 9999999999999998643210 0011223345677889999
Q ss_pred CCCccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHc----cC-CCeEEEEecCHHHHHh
Q 005532 247 GFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG----KQ-DVPMVIISHDRAFLDQ 321 (692)
Q Consensus 247 gl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~----~~-~~tvI~vsHd~~~l~~ 321 (692)
|+. ...++++.+|||||||||+|||||+.+|+||||||||++||+.+++++.+.|+ +. |.|+|+||||++++..
T Consensus 126 gL~-~~~~~~~~~LSgGq~QRvaLARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~~g~til~vTHd~~ea~~ 204 (362)
T TIGR03258 126 GLG-DAAAHLPAQLSGGMQQRIAIARAIAIEPDVLLLDEPLSALDANIRANMREEIAALHEELPELTILCVTHDQDDALT 204 (362)
T ss_pred CCC-chhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhCCCCEEEEEeCCHHHHHH
Confidence 996 57899999999999999999999999999999999999999999999988764 23 7899999999999999
Q ss_pred hcCeEEEEecceEEEeccChHHH
Q 005532 322 LCTKIVETEMGVSRTYEGNYSQY 344 (692)
Q Consensus 322 ~~d~i~~l~~G~~~~~~G~y~~~ 344 (692)
+||+|++|++|++. ..|...+.
T Consensus 205 l~dri~vl~~G~i~-~~g~~~~~ 226 (362)
T TIGR03258 205 LADKAGIMKDGRLA-AHGEPQAL 226 (362)
T ss_pred hCCEEEEEECCEEE-EEcCHHHH
Confidence 99999999999984 55765443
No 90
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=2.4e-42 Score=349.86 Aligned_cols=198 Identities=31% Similarity=0.497 Sum_probs=170.4
Q ss_pred EEEEeEEEEeCCe----eceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC---------ceEE
Q 005532 98 VKLENISKSYKGV----TVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN---------MKIA 164 (692)
Q Consensus 98 l~i~~ls~~y~~~----~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~---------~~i~ 164 (692)
|+++|++++|++. ++|+++||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|.. ..|+
T Consensus 2 l~~~~v~~~~~~~~~~~~il~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~i~ 81 (218)
T cd03266 2 ITADALTKRFRDVKKTVQAVDGVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLEPDAGFATVDGFDVVKEPAEARRRLG 81 (218)
T ss_pred eEEEEEEEecCCCCccceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEEcccCHHHHHhhEE
Confidence 7899999999876 79999999999999999999999999999999999999999999998743 2599
Q ss_pred EEcccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHHhh
Q 005532 165 FLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMP 244 (692)
Q Consensus 165 ~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~ 244 (692)
|++|++.+++..||.||+..... .. .........++.++++
T Consensus 82 ~~~q~~~~~~~~tv~e~l~~~~~---------------~~------------------------~~~~~~~~~~~~~~l~ 122 (218)
T cd03266 82 FVSDSTGLYDRLTARENLEYFAG---------------LY------------------------GLKGDELTARLEELAD 122 (218)
T ss_pred EecCCcccCcCCCHHHHHHHHHH---------------Hc------------------------CCCHHHHHHHHHHHHH
Confidence 99999988777899999852110 00 0011122345667888
Q ss_pred hcCCCccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc---CCCeEEEEecCHHHHHh
Q 005532 245 ELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK---QDVPMVIISHDRAFLDQ 321 (692)
Q Consensus 245 ~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~---~~~tvI~vsHd~~~l~~ 321 (692)
.+|+. +..++++.+|||||||||+|||||+.+|++|||||||++||+.+++++.++|++ .+.|||+||||++++..
T Consensus 123 ~~~l~-~~~~~~~~~LS~G~~qrv~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~ 201 (218)
T cd03266 123 RLGME-ELLDRRVGGFSTGMRQKVAIARALVHDPPVLLLDEPTTGLDVMATRALREFIRQLRALGKCILFSTHIMQEVER 201 (218)
T ss_pred HcCCH-HHHhhhhhhcCHHHHHHHHHHHHHhcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence 88986 567888999999999999999999999999999999999999999999888753 48899999999999999
Q ss_pred hcCeEEEEecceEE
Q 005532 322 LCTKIVETEMGVSR 335 (692)
Q Consensus 322 ~~d~i~~l~~G~~~ 335 (692)
+||+++++++|++.
T Consensus 202 ~~d~i~~l~~G~i~ 215 (218)
T cd03266 202 LCDRVVVLHRGRVV 215 (218)
T ss_pred hcCEEEEEECCEEe
Confidence 99999999999874
No 91
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=4e-42 Score=371.06 Aligned_cols=211 Identities=29% Similarity=0.443 Sum_probs=179.3
Q ss_pred cEEEEeEEEEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC--------ceEEEEcc
Q 005532 97 GVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN--------MKIAFLSQ 168 (692)
Q Consensus 97 ~l~i~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~--------~~i~~v~Q 168 (692)
.|+++|++++|++.++|+|+||+|++||+++|+|||||||||||++|+|+++|++|+|.++|.+ ..|+|++|
T Consensus 2 ~L~i~~l~~~~~~~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~~~r~i~~v~Q 81 (353)
T PRK10851 2 SIEIANIKKSFGRTQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEHQTSGHIRFHGTDVSRLHARDRKVGFVFQ 81 (353)
T ss_pred EEEEEEEEEEeCCeEEEEEeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHCCEEEEec
Confidence 4899999999998889999999999999999999999999999999999999999999998743 35999999
Q ss_pred cCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHHhhhcCC
Q 005532 169 EFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGF 248 (692)
Q Consensus 169 ~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl 248 (692)
++.+++.+||.||+...+... .. ....+.....+++.++++.+|+
T Consensus 82 ~~~l~p~~tv~eni~~~~~~~--------------~~---------------------~~~~~~~~~~~~~~~~l~~~~L 126 (353)
T PRK10851 82 HYALFRHMTVFDNIAFGLTVL--------------PR---------------------RERPNAAAIKAKVTQLLEMVQL 126 (353)
T ss_pred CcccCCCCcHHHHHHhhhhhc--------------cc---------------------ccCCCHHHHHHHHHHHHHHcCC
Confidence 999989999999986332100 00 0001112334577788999999
Q ss_pred CccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHc----cCCCeEEEEecCHHHHHhhcC
Q 005532 249 TADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG----KQDVPMVIISHDRAFLDQLCT 324 (692)
Q Consensus 249 ~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~----~~~~tvI~vsHd~~~l~~~~d 324 (692)
. ...++++.+|||||||||+|||||+.+|++|||||||++||+.+++.+.+.|+ +.+.|+|+||||++++..+||
T Consensus 127 ~-~~~~~~~~~LSgGq~QRvalArAL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tii~vTHd~~ea~~~~D 205 (353)
T PRK10851 127 A-HLADRYPAQLSGGQKQRVALARALAVEPQILLLDEPFGALDAQVRKELRRWLRQLHEELKFTSVFVTHDQEEAMEVAD 205 (353)
T ss_pred c-hhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCC
Confidence 6 57899999999999999999999999999999999999999999998887764 348999999999999999999
Q ss_pred eEEEEecceEEEeccChHHH
Q 005532 325 KIVETEMGVSRTYEGNYSQY 344 (692)
Q Consensus 325 ~i~~l~~G~~~~~~G~y~~~ 344 (692)
+|++|++|++. ..|...+.
T Consensus 206 ri~vl~~G~i~-~~g~~~~i 224 (353)
T PRK10851 206 RVVVMSQGNIE-QAGTPDQV 224 (353)
T ss_pred EEEEEECCEEE-EEcCHHHH
Confidence 99999999984 55765443
No 92
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=3e-42 Score=353.40 Aligned_cols=215 Identities=27% Similarity=0.423 Sum_probs=174.7
Q ss_pred EEEEeEEEEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC-----------ceEEEE
Q 005532 98 VKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN-----------MKIAFL 166 (692)
Q Consensus 98 l~i~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~-----------~~i~~v 166 (692)
|+++|++++|+++++|+++||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.. ..|+|+
T Consensus 1 l~~~~l~~~~~~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i~~v 80 (236)
T cd03219 1 LEVRGLTKRFGGLVALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLRPTSGSVLFDGEDITGLPPHEIARLGIGRT 80 (236)
T ss_pred CeeeeeEEEECCEEEecCceEEecCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEECCCCCHHHHHhcCEEEE
Confidence 468999999998889999999999999999999999999999999999999999999998732 249999
Q ss_pred cccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHHhhhc
Q 005532 167 SQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPEL 246 (692)
Q Consensus 167 ~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~l 246 (692)
+|++.+++..||++|+........ .. ..... ...........++.++++.+
T Consensus 81 ~q~~~l~~~~tv~~~l~~~~~~~~-----------~~-~~~~~-----------------~~~~~~~~~~~~~~~~l~~~ 131 (236)
T cd03219 81 FQIPRLFPELTVLENVMVAAQART-----------GS-GLLLA-----------------RARREEREARERAEELLERV 131 (236)
T ss_pred ecccccccCCCHHHHHHHHHhhcc-----------cc-ccccc-----------------cccccHHHHHHHHHHHHHHc
Confidence 999988888899999853211000 00 00000 00000112234567888899
Q ss_pred CCCccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc---CCCeEEEEecCHHHHHhhc
Q 005532 247 GFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK---QDVPMVIISHDRAFLDQLC 323 (692)
Q Consensus 247 gl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~---~~~tvI~vsHd~~~l~~~~ 323 (692)
|+. ...++++.+|||||||||+|||||+.+|++|||||||++||+.+++++.++|++ .++|||+||||++++..+|
T Consensus 132 ~l~-~~~~~~~~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~~~~~~~ 210 (236)
T cd03219 132 GLA-DLADRPAGELSYGQQRRLEIARALATDPKLLLLDEPAAGLNPEETEELAELIRELRERGITVLLVEHDMDVVMSLA 210 (236)
T ss_pred Ccc-chhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhC
Confidence 996 567889999999999999999999999999999999999999999999888753 5789999999999999999
Q ss_pred CeEEEEecceEEEeccChHH
Q 005532 324 TKIVETEMGVSRTYEGNYSQ 343 (692)
Q Consensus 324 d~i~~l~~G~~~~~~G~y~~ 343 (692)
|+|+++++|++. +.|..++
T Consensus 211 d~i~~l~~G~i~-~~~~~~~ 229 (236)
T cd03219 211 DRVTVLDQGRVI-AEGTPDE 229 (236)
T ss_pred CEEEEEeCCEEE-eecCHHH
Confidence 999999999984 5565443
No 93
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=100.00 E-value=5.2e-42 Score=363.94 Aligned_cols=206 Identities=25% Similarity=0.486 Sum_probs=177.2
Q ss_pred cEEEEeEEEEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC---------ceEEEEc
Q 005532 97 GVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN---------MKIAFLS 167 (692)
Q Consensus 97 ~l~i~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~---------~~i~~v~ 167 (692)
.++++|++++|++..+|+|+||+|++|+++||+||||||||||+++|+|+++|++|+|.++|.+ ..+||++
T Consensus 2 ~l~~~~l~~~~~~~~~l~~is~~i~~Gei~~l~G~NGaGKTTLl~~l~Gl~~~~~G~i~i~g~~~~~~~~~~~~~ig~~~ 81 (301)
T TIGR03522 2 SIRVSSLTKLYGTQNALDEVSFEAQKGRIVGFLGPNGAGKSTTMKIITGYLPPDSGSVQVCGEDVLQNPKEVQRNIGYLP 81 (301)
T ss_pred EEEEEEEEEEECCEEEEEEeEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccChHHHHhceEEec
Confidence 3899999999998889999999999999999999999999999999999999999999998743 2599999
Q ss_pred ccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHHhhhcC
Q 005532 168 QEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELG 247 (692)
Q Consensus 168 Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lg 247 (692)
|++.++++.|+.||+..... +. ..+......++.++++.+|
T Consensus 82 q~~~l~~~~tv~e~l~~~~~---------------~~------------------------~~~~~~~~~~~~~~l~~~g 122 (301)
T TIGR03522 82 EHNPLYLDMYVREYLQFIAG---------------IY------------------------GMKGQLLKQRVEEMIELVG 122 (301)
T ss_pred CCCCCCCCCcHHHHHHHHHH---------------Hc------------------------CCCHHHHHHHHHHHHHHCC
Confidence 99998888999999742100 00 0111122345677888999
Q ss_pred CCccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc--CCCeEEEEecCHHHHHhhcCe
Q 005532 248 FTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVIISHDRAFLDQLCTK 325 (692)
Q Consensus 248 l~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~--~~~tvI~vsHd~~~l~~~~d~ 325 (692)
+. ...++++.+|||||||||+|||||+.+|++|||||||+|||+.+++++.+.|++ .++|||++||+++++.++||+
T Consensus 123 l~-~~~~~~~~~LS~G~~qrv~la~al~~~p~lliLDEPt~gLD~~~~~~l~~~l~~~~~~~tiii~sH~l~~~~~~~d~ 201 (301)
T TIGR03522 123 LR-PEQHKKIGQLSKGYRQRVGLAQALIHDPKVLILDEPTTGLDPNQLVEIRNVIKNIGKDKTIILSTHIMQEVEAICDR 201 (301)
T ss_pred Cc-hHhcCchhhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHhcCCCEEEEEcCCHHHHHHhCCE
Confidence 97 467899999999999999999999999999999999999999999999887754 378999999999999999999
Q ss_pred EEEEecceEEEeccChHH
Q 005532 326 IVETEMGVSRTYEGNYSQ 343 (692)
Q Consensus 326 i~~l~~G~~~~~~G~y~~ 343 (692)
|+++++|++. +.|...+
T Consensus 202 i~~l~~G~i~-~~g~~~~ 218 (301)
T TIGR03522 202 VIIINKGKIV-ADKKLDE 218 (301)
T ss_pred EEEEECCEEE-EeCCHHH
Confidence 9999999984 6787644
No 94
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.5e-42 Score=371.94 Aligned_cols=208 Identities=25% Similarity=0.410 Sum_probs=179.2
Q ss_pred CCcEEEEeEEEEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC--------ceEEEE
Q 005532 95 SSGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN--------MKIAFL 166 (692)
Q Consensus 95 ~~~l~i~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~--------~~i~~v 166 (692)
.++|+++|++++|++.++|+|+||+|++|++++|+|||||||||||++|+|+++|++|+|.++|.. ..|||+
T Consensus 17 ~~~l~l~~v~~~~~~~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~~~r~ig~v 96 (377)
T PRK11607 17 TPLLEIRNLTKSFDGQHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQPTAGQIMLDGVDLSHVPPYQRPINMM 96 (377)
T ss_pred CceEEEEeEEEEECCEEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHHHCCEEEE
Confidence 456999999999998889999999999999999999999999999999999999999999998753 259999
Q ss_pred cccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHHhhhc
Q 005532 167 SQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPEL 246 (692)
Q Consensus 167 ~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~l 246 (692)
+|++.+++++||.||+...+.. .........+++.++++.+
T Consensus 97 fQ~~~lfp~ltv~eNi~~~l~~---------------------------------------~~~~~~~~~~~v~~~l~~l 137 (377)
T PRK11607 97 FQSYALFPHMTVEQNIAFGLKQ---------------------------------------DKLPKAEIASRVNEMLGLV 137 (377)
T ss_pred eCCCccCCCCCHHHHHHHHHHH---------------------------------------cCCCHHHHHHHHHHHHHHc
Confidence 9999999999999998643210 0011122345677889999
Q ss_pred CCCccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHH----ccCCCeEEEEecCHHHHHhh
Q 005532 247 GFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYL----GKQDVPMVIISHDRAFLDQL 322 (692)
Q Consensus 247 gl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L----~~~~~tvI~vsHd~~~l~~~ 322 (692)
|+. ...++++.+|||||||||+|||||+.+|+||||||||++||+.+++++...| ++.+.|+|+||||.+++..+
T Consensus 138 ~L~-~~~~~~~~~LSgGq~QRVaLARAL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~l 216 (377)
T PRK11607 138 HMQ-EFAKRKPHQLSGGQRQRVALARSLAKRPKLLLLDEPMGALDKKLRDRMQLEVVDILERVGVTCVMVTHDQEEAMTM 216 (377)
T ss_pred CCc-hhhcCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHh
Confidence 996 5789999999999999999999999999999999999999999998887544 45689999999999999999
Q ss_pred cCeEEEEecceEEEeccChHH
Q 005532 323 CTKIVETEMGVSRTYEGNYSQ 343 (692)
Q Consensus 323 ~d~i~~l~~G~~~~~~G~y~~ 343 (692)
||+|++|++|++. ..|...+
T Consensus 217 aDri~vl~~G~i~-~~g~~~~ 236 (377)
T PRK11607 217 AGRIAIMNRGKFV-QIGEPEE 236 (377)
T ss_pred CCEEEEEeCCEEE-EEcCHHH
Confidence 9999999999984 4566443
No 95
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=100.00 E-value=6.8e-42 Score=355.37 Aligned_cols=210 Identities=24% Similarity=0.417 Sum_probs=177.7
Q ss_pred CcEEEEeEEEEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC---------------
Q 005532 96 SGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN--------------- 160 (692)
Q Consensus 96 ~~l~i~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~--------------- 160 (692)
+.|+++|+++.|+++++|+|+||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|..
T Consensus 4 ~~l~~~~l~~~~~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 83 (257)
T PRK10619 4 NKLNVIDLHKRYGEHEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPSEGSIVVNGQTINLVRDKDGQLKVAD 83 (257)
T ss_pred ccEEEeeeEEEECCEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEccccccccccccccc
Confidence 45999999999998899999999999999999999999999999999999999999999998732
Q ss_pred --------ceEEEEcccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCc
Q 005532 161 --------MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNL 232 (692)
Q Consensus 161 --------~~i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (692)
..|+|++|++.+++..|++||+...... +. ....
T Consensus 84 ~~~~~~~~~~i~~v~q~~~l~~~~sv~enl~~~~~~--------------~~------------------------~~~~ 125 (257)
T PRK10619 84 KNQLRLLRTRLTMVFQHFNLWSHMTVLENVMEAPIQ--------------VL------------------------GLSK 125 (257)
T ss_pred chHHHHHhhceEEEecCcccCCCCcHHHHHHHHHHH--------------hC------------------------CCCH
Confidence 2599999999887788999998532100 00 0011
Q ss_pred ccHHHHHHHHhhhcCCCccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHc---cCCCeE
Q 005532 233 DTLDAKVSKLMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG---KQDVPM 309 (692)
Q Consensus 233 ~~~~~~i~~ll~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~---~~~~tv 309 (692)
.....++.++++.+|+.....++++.+|||||||||+|||||+.+|++|||||||++||+.+++++.++|+ +.|+||
T Consensus 126 ~~~~~~~~~~l~~~gl~~~~~~~~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~g~ti 205 (257)
T PRK10619 126 QEARERAVKYLAKVGIDERAQGKYPVHLSGGQQQRVSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAEEGKTM 205 (257)
T ss_pred HHHHHHHHHHHHHcCCChhhhhCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEE
Confidence 12244567788899996433478899999999999999999999999999999999999999999988764 358999
Q ss_pred EEEecCHHHHHhhcCeEEEEecceEEEeccChHHH
Q 005532 310 VIISHDRAFLDQLCTKIVETEMGVSRTYEGNYSQY 344 (692)
Q Consensus 310 I~vsHd~~~l~~~~d~i~~l~~G~~~~~~G~y~~~ 344 (692)
|+||||++++..+||+|+++++|++. +.|.+.++
T Consensus 206 iivsH~~~~~~~~~d~i~~l~~G~i~-~~~~~~~~ 239 (257)
T PRK10619 206 VVVTHEMGFARHVSSHVIFLHQGKIE-EEGAPEQL 239 (257)
T ss_pred EEEeCCHHHHHHhcCEEEEEECCEEE-EeCCHHHh
Confidence 99999999999999999999999984 66776554
No 96
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=8.4e-43 Score=368.39 Aligned_cols=206 Identities=28% Similarity=0.460 Sum_probs=182.3
Q ss_pred CceEEEEeEEEEcCCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccce--------eeee
Q 005532 422 RSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL--------PNYF 493 (692)
Q Consensus 422 ~~~l~~~~l~~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~~--------~~~~ 493 (692)
.+.++++||++.|++..+++|+||+|++||+++|+|||||||||||++|+|+..|++|+|.++|.++. .+++
T Consensus 3 ~~~l~i~~v~k~yg~~~av~~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~p~~G~I~l~G~~i~~lpp~kR~ig~V 82 (352)
T COG3842 3 KPALEIRNVSKSFGDFTAVDDISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQPSSGEILLDGEDITDVPPEKRPIGMV 82 (352)
T ss_pred CceEEEEeeeeecCCeeEEecceeeecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChhhccccee
Confidence 35699999999999999999999999999999999999999999999999999999999999998763 3567
Q ss_pred cccchhhcCCCccHHHHHHHHhc-cc--c----HHHHHHHHhhcCCCcccccccCCCCCHHHHHHHHHHHHhccCCcEEE
Q 005532 494 EQNQAEALDLDKTVLETVAEAAE-DW--R----IDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLV 566 (692)
Q Consensus 494 ~q~~~~~l~~~~tv~e~~~~~~~-~~--~----~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~LAral~~~p~lLl 566 (692)
+|+ +.++|++||.+|+.+... .+ . ...+.++|+.+++. +..++++++|||||||||+|||||+.+|+|||
T Consensus 83 FQ~--YALFPHltV~~NVafGLk~~~~~~~~~i~~rv~e~L~lV~L~-~~~~R~p~qLSGGQqQRVALARAL~~~P~vLL 159 (352)
T COG3842 83 FQS--YALFPHMTVEENVAFGLKVRKKLKKAEIKARVEEALELVGLE-GFADRKPHQLSGGQQQRVALARALVPEPKVLL 159 (352)
T ss_pred ecC--cccCCCCcHHHHhhhhhhhcCCCCHHHHHHHHHHHHHHcCch-hhhhhChhhhChHHHHHHHHHHHhhcCcchhh
Confidence 764 679999999999988755 11 1 23688999999995 68899999999999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHh----cCceEEEEecCHHHHHhhccEEEEEECCEEEEecCChhHHHH
Q 005532 567 LDEPTNHLDIPSKEMLEEAISE----YKGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYYLE 630 (692)
Q Consensus 567 LDEPTn~LD~~~~~~l~~~l~~----~~~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~~~~~ 630 (692)
||||.++||..-++.+...|++ .+.|.|+||||.+++..++|||++|++|+|....-+.+-|..
T Consensus 160 LDEPlSaLD~kLR~~mr~Elk~lq~~~giT~i~VTHDqeEAl~msDrI~Vm~~G~I~Q~gtP~eiY~~ 227 (352)
T COG3842 160 LDEPLSALDAKLREQMRKELKELQRELGITFVYVTHDQEEALAMSDRIAVMNDGRIEQVGTPEEIYER 227 (352)
T ss_pred hcCcccchhHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHhhhccceEEccCCceeecCCHHHHhhC
Confidence 9999999999999888877664 456999999999999999999999999999876555555543
No 97
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.5e-42 Score=370.25 Aligned_cols=205 Identities=29% Similarity=0.501 Sum_probs=174.6
Q ss_pred cEEEEeEEEEeC----CeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC------------
Q 005532 97 GVKLENISKSYK----GVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN------------ 160 (692)
Q Consensus 97 ~l~i~~ls~~y~----~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~------------ 160 (692)
+|+++|++|+|+ ++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.+
T Consensus 1 mi~i~~l~~~y~~~~~~~~il~~vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~ 80 (343)
T PRK11153 1 MIELKNISKVFPQGGRTIHALNNVSLHIPAGEIFGVIGASGAGKSTLIRCINLLERPTSGRVLVDGQDLTALSEKELRKA 80 (343)
T ss_pred CEEEEeEEEEeCCCCCceEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHH
Confidence 388999999997 3679999999999999999999999999999999999999999999998732
Q ss_pred -ceEEEEcccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHH
Q 005532 161 -MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKV 239 (692)
Q Consensus 161 -~~i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 239 (692)
..|+|++|++.+++..||.+|+..... +. .........++
T Consensus 81 ~~~ig~v~q~~~l~~~~tv~eni~~~~~---------------~~------------------------~~~~~~~~~~~ 121 (343)
T PRK11153 81 RRQIGMIFQHFNLLSSRTVFDNVALPLE---------------LA------------------------GTPKAEIKARV 121 (343)
T ss_pred hcCEEEEeCCCccCCCCcHHHHHHHHHH---------------Hc------------------------CCCHHHHHHHH
Confidence 259999999988888999999853210 00 00111223456
Q ss_pred HHHhhhcCCCccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc----CCCeEEEEecC
Q 005532 240 SKLMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVIISHD 315 (692)
Q Consensus 240 ~~ll~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~----~~~tvI~vsHd 315 (692)
.++++.+|+. ...++++.+|||||||||+|||||+.+|+||||||||++||+.++..+.++|++ .++|||+||||
T Consensus 122 ~~~l~~~gL~-~~~~~~~~~LSgGq~qRv~lAraL~~~p~iLlLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiilvtH~ 200 (343)
T PRK11153 122 TELLELVGLS-DKADRYPAQLSGGQKQRVAIARALASNPKVLLCDEATSALDPATTRSILELLKDINRELGLTIVLITHE 200 (343)
T ss_pred HHHHHHcCCc-hhhhCChhhCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCC
Confidence 7788889996 567889999999999999999999999999999999999999999999888753 48899999999
Q ss_pred HHHHHhhcCeEEEEecceEEEeccChH
Q 005532 316 RAFLDQLCTKIVETEMGVSRTYEGNYS 342 (692)
Q Consensus 316 ~~~l~~~~d~i~~l~~G~~~~~~G~y~ 342 (692)
++++..+||+|++|++|++. +.|...
T Consensus 201 ~~~i~~~~d~v~~l~~G~i~-~~g~~~ 226 (343)
T PRK11153 201 MDVVKRICDRVAVIDAGRLV-EQGTVS 226 (343)
T ss_pred HHHHHHhCCEEEEEECCEEE-EEcCHH
Confidence 99999999999999999984 556543
No 98
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=100.00 E-value=6.3e-42 Score=354.14 Aligned_cols=208 Identities=26% Similarity=0.450 Sum_probs=175.1
Q ss_pred cEEEEeEEEEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC----------------
Q 005532 97 GVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN---------------- 160 (692)
Q Consensus 97 ~l~i~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~---------------- 160 (692)
+|+++|++++|+++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|..
T Consensus 3 ~l~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~ 82 (250)
T PRK11264 3 AIEVKNLVKKFHGQTVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRCINLLEQPEAGTIRVGDITIDTARSLSQQKGLIRQ 82 (250)
T ss_pred cEEEeceEEEECCeeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccccccchhhHHHH
Confidence 5999999999998889999999999999999999999999999999999999999999987631
Q ss_pred --ceEEEEcccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHH
Q 005532 161 --MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAK 238 (692)
Q Consensus 161 --~~i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (692)
..++|++|++.+++..|+.+|+...... .. .........+
T Consensus 83 ~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~--------------~~------------------------~~~~~~~~~~ 124 (250)
T PRK11264 83 LRQHVGFVFQNFNLFPHRTVLENIIEGPVI--------------VK------------------------GEPKEEATAR 124 (250)
T ss_pred hhhhEEEEecCcccCCCCCHHHHHHHHHHH--------------hc------------------------CCCHHHHHHH
Confidence 2599999999887788999998531100 00 0001122345
Q ss_pred HHHHhhhcCCCccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHc---cCCCeEEEEecC
Q 005532 239 VSKLMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG---KQDVPMVIISHD 315 (692)
Q Consensus 239 i~~ll~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~---~~~~tvI~vsHd 315 (692)
+.++++.+|+. ...++++.+|||||||||+|||||+.+|+||||||||++||+.+++++.++|+ +.+.|||+||||
T Consensus 125 ~~~~l~~~gl~-~~~~~~~~~LS~Gq~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~tH~ 203 (250)
T PRK11264 125 ARELLAKVGLA-GKETSYPRRLSGGQQQRVAIARALAMRPEVILFDEPTSALDPELVGEVLNTIRQLAQEKRTMVIVTHE 203 (250)
T ss_pred HHHHHHHcCCc-chhhCChhhCChHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhcCCEEEEEeCC
Confidence 66788888986 45688899999999999999999999999999999999999999999988764 358899999999
Q ss_pred HHHHHhhcCeEEEEecceEEEeccChHHH
Q 005532 316 RAFLDQLCTKIVETEMGVSRTYEGNYSQY 344 (692)
Q Consensus 316 ~~~l~~~~d~i~~l~~G~~~~~~G~y~~~ 344 (692)
++++..+||+|+++++|++. +.|...++
T Consensus 204 ~~~~~~~~d~i~~l~~G~i~-~~~~~~~~ 231 (250)
T PRK11264 204 MSFARDVADRAIFMDQGRIV-EQGPAKAL 231 (250)
T ss_pred HHHHHHhcCEEEEEECCEEE-EeCCHHHH
Confidence 99999999999999999974 56665443
No 99
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.3e-42 Score=346.37 Aligned_cols=197 Identities=29% Similarity=0.469 Sum_probs=168.8
Q ss_pred EEEEeEEEEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC---------ceEEEEcc
Q 005532 98 VKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN---------MKIAFLSQ 168 (692)
Q Consensus 98 l~i~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~---------~~i~~v~Q 168 (692)
|+++|++|+|+++++|+|+||+|++| +++|+||||||||||+++|+|+++|++|+|.++|.. ..++|++|
T Consensus 1 i~~~~~~~~~~~~~~l~~vs~~i~~g-~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~i~~~~q 79 (211)
T cd03264 1 LQLENLTKRYGKKRALDGVSLTLGPG-MYGLLGPNGAGKTTLMRILATLTPPSSGTIRIDGQDVLKQPQKLRRRIGYLPQ 79 (211)
T ss_pred CEEEEEEEEECCEEEEcceeEEEcCC-cEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCCccccchHHHHhheEEecC
Confidence 47899999998888999999999999 999999999999999999999999999999998743 35999999
Q ss_pred cCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHHhhhcCC
Q 005532 169 EFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGF 248 (692)
Q Consensus 169 ~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl 248 (692)
++.+++..||.+|+..... +. ..+......++.++++.+|+
T Consensus 80 ~~~~~~~~tv~~~l~~~~~---------------~~------------------------~~~~~~~~~~~~~~l~~~~l 120 (211)
T cd03264 80 EFGVYPNFTVREFLDYIAW---------------LK------------------------GIPSKEVKARVDEVLELVNL 120 (211)
T ss_pred CCcccccCCHHHHHHHHHH---------------Hh------------------------CCCHHHHHHHHHHHHHHCCC
Confidence 9988778899999852110 00 00111223456677888888
Q ss_pred CccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc--CCCeEEEEecCHHHHHhhcCeE
Q 005532 249 TADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVIISHDRAFLDQLCTKI 326 (692)
Q Consensus 249 ~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~--~~~tvI~vsHd~~~l~~~~d~i 326 (692)
. ...++++.+|||||||||+|||||+.+|++|||||||++||+.+++++.++|++ .+.|||+||||++++..+||++
T Consensus 121 ~-~~~~~~~~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~vsH~~~~~~~~~d~i 199 (211)
T cd03264 121 G-DRAKKKIGSLSGGMRRRVGIAQALVGDPSILIVDEPTAGLDPEERIRFRNLLSELGEDRIVILSTHIVEDVESLCNQV 199 (211)
T ss_pred H-HHHhCchhhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhCCCEEEEEcCCHHHHHHhCCEE
Confidence 6 456888999999999999999999999999999999999999999999988864 2689999999999999999999
Q ss_pred EEEecceEE
Q 005532 327 VETEMGVSR 335 (692)
Q Consensus 327 ~~l~~G~~~ 335 (692)
+++++|++.
T Consensus 200 ~~l~~g~i~ 208 (211)
T cd03264 200 AVLNKGKLV 208 (211)
T ss_pred EEEECCEEE
Confidence 999999874
No 100
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=1.9e-42 Score=347.34 Aligned_cols=191 Identities=31% Similarity=0.541 Sum_probs=164.6
Q ss_pred EEeEEEEeCC-eeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC-------ceEEEEcccCc
Q 005532 100 LENISKSYKG-VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN-------MKIAFLSQEFE 171 (692)
Q Consensus 100 i~~ls~~y~~-~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~-------~~i~~v~Q~~~ 171 (692)
++|++++|++ +++|+++||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.. ..|+|++|++.
T Consensus 2 ~~~l~~~~~~~~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~i~~~~q~~~ 81 (205)
T cd03226 2 IENISFSYKKGTEILDDLSLDLYAGEIIALTGKNGAGKTTLAKILAGLIKESSGSILLNGKPIKAKERRKSIGYVMQDVD 81 (205)
T ss_pred cccEEEEeCCcCceeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEhhhHHhhcceEEEecChh
Confidence 6899999987 789999999999999999999999999999999999999999999998754 26999999974
Q ss_pred c-CCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHHhhhcCCCc
Q 005532 172 V-SMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFTA 250 (692)
Q Consensus 172 ~-~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl~~ 250 (692)
. ++..|+.||+...... .. ....++.++++.+|+.
T Consensus 82 ~~~~~~tv~e~l~~~~~~-----------------------------------------~~--~~~~~~~~~l~~~~l~- 117 (205)
T cd03226 82 YQLFTDSVREELLLGLKE-----------------------------------------LD--AGNEQAETVLKDLDLY- 117 (205)
T ss_pred hhhhhccHHHHHhhhhhh-----------------------------------------cC--ccHHHHHHHHHHcCCc-
Confidence 2 3467999998521100 00 0123566788888986
Q ss_pred cccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc---CCCeEEEEecCHHHHHhhcCeEE
Q 005532 251 DDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK---QDVPMVIISHDRAFLDQLCTKIV 327 (692)
Q Consensus 251 ~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~---~~~tvI~vsHd~~~l~~~~d~i~ 327 (692)
+..++++.+||||||||++|||||+.+|++|||||||++||+.+++++.++|++ .+.|||++|||++++..+||+|+
T Consensus 118 ~~~~~~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~ 197 (205)
T cd03226 118 ALKERHPLSLSGGQKQRLAIAAALLSGKDLLIFDEPTSGLDYKNMERVGELIRELAAQGKAVIVITHDYEFLAKVCDRVL 197 (205)
T ss_pred hhcCCCchhCCHHHHHHHHHHHHHHhCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEE
Confidence 567889999999999999999999999999999999999999999999888753 48899999999999999999999
Q ss_pred EEecceE
Q 005532 328 ETEMGVS 334 (692)
Q Consensus 328 ~l~~G~~ 334 (692)
++++|++
T Consensus 198 ~l~~G~i 204 (205)
T cd03226 198 LLANGAI 204 (205)
T ss_pred EEECCEE
Confidence 9999975
No 101
>PRK00635 excinuclease ABC subunit A; Provisional
Probab=100.00 E-value=2.9e-41 Score=412.85 Aligned_cols=329 Identities=23% Similarity=0.283 Sum_probs=230.5
Q ss_pred hhhcCCCccccccccccCChHHHHHHHHHHHHccCC--CeEEEcCCCCCCCHHHHHHHHHHHc---cCCCeEEEEecCHH
Q 005532 243 MPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDP--DLLLLDEPTNHLDLDTIEWLEGYLG---KQDVPMVIISHDRA 317 (692)
Q Consensus 243 l~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p--~lLLLDEPts~LD~~~~~~L~~~L~---~~~~tvI~vsHd~~ 317 (692)
|..+|+.....++++.+|||||+|||+||+||..+| ++|||||||+|||+..++.|.++|+ +.|.|||+||||++
T Consensus 460 L~~vGL~~L~ldR~~~tLSGGE~QRV~LAraL~~~p~g~lLILDEPTagLD~~~~~~L~~lL~~L~~~G~TVIvVeHd~~ 539 (1809)
T PRK00635 460 LIDLGLPYLTPERALATLSGGEQERTALAKHLGAELIGITYILDEPSIGLHPQDTHKLINVIKKLRDQGNTVLLVEHDEQ 539 (1809)
T ss_pred HHhccccCCCCCCchhhCCHHHHHHHHHHHHHhcCCCCcEEEEECCccCCCHHHHHHHHHHHHHHHhCCCEEEEEeCcHH
Confidence 456788633368999999999999999999999999 8999999999999999999988764 46899999999999
Q ss_pred HHHhhcCeEEEEe------cceEEEeccChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchhhhHHHHH
Q 005532 318 FLDQLCTKIVETE------MGVSRTYEGNYSQYVLEKAAWIESQYAAWEKQQREIEQTKDLINRLGAGANSGRASSAEKK 391 (692)
Q Consensus 318 ~l~~~~d~i~~l~------~G~~~~~~G~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~ 391 (692)
+.++||+|++|. +|++ .+.|.+.++...... ....+... ..
T Consensus 540 -vi~~aDrVi~L~pGag~~gG~I-v~~G~~~eil~~~~~---------------------l~~~~l~~----~~------ 586 (1809)
T PRK00635 540 -MISLADRIIDIGPGAGIFGGEV-LFNGSPREFLAKSDS---------------------LTAKYLRQ----EL------ 586 (1809)
T ss_pred -HHHhCCEEEEEcCCcccCCCEE-EEecCHHHHhhChHH---------------------HHHHHhcC----cc------
Confidence 458999999996 5565 567776544221000 00000000 00
Q ss_pred HHHHHHHhhhcccccccceeeecCCCCCCCCceEEEEeEEEEcCCeecccceeEEEeCCCEEEEEcCCCCcHHHHHH---
Q 005532 392 LERLQEEEQIEKPFQRKQMKIRFPERGRSGRSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLK--- 468 (692)
Q Consensus 392 l~rl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~--- 468 (692)
....+ .........|++++++. ..|+++||+|++|+++||+|+||||||||++
T Consensus 587 --------~~~~~-----------~~~~~~~~~L~l~~~~~-----~~Lk~isl~Ip~Geiv~VtG~nGSGKSTLl~~~L 642 (1809)
T PRK00635 587 --------TIPIP-----------EKRTNSLGTLTLSKATK-----HNLKDLTISLPLGRLTVVTGVSGSGKSSLINDTL 642 (1809)
T ss_pred --------cccCc-----------ccccCCCCeEEEecccc-----CCccceEEEEcCCcEEEEEcCCCCCHHHHHHHHH
Confidence 00000 00001123688998863 3699999999999999999999999999999
Q ss_pred ------HHhcCCCCCe----eE----EEECCccc------------------e---------------eeeecccc----
Q 005532 469 ------LIMGLEKPRG----GE----VLLGEHNV------------------L---------------PNYFEQNQ---- 497 (692)
Q Consensus 469 ------~L~g~~~p~~----G~----i~~~~~~~------------------~---------------~~~~~q~~---- 497 (692)
.|.|...+.. +. |.++...+ + ...|..+.
T Consensus 643 ~~~l~~~l~~~~~~~~~i~g~~i~~vi~idQspigr~~rS~~atY~g~fd~IR~lFA~~~~ak~~g~~~~~fsfn~~gG~ 722 (1809)
T PRK00635 643 VPAVEEFIEQGFCSNLSIQWGAISRLVHITRDLPGRSQRSIPLTYIKAFDDLRELFAEQPRSKRLGLTKSHFSFNTPLGA 722 (1809)
T ss_pred HHHHHHHhcCCCcccccccccccceeEEecCCCCCCCCCCCceeehhhhHHHHHHHhhChHHHHcCCCcceeeecCCCCC
Confidence 5666532211 11 11111100 0 00010000
Q ss_pred ---------------h------------------hhcCCCccHHHHHHHHhcc--------ccHHHHHHHHhhcCCCccc
Q 005532 498 ---------------A------------------EALDLDKTVLETVAEAAED--------WRIDDIKGLLGRCNFKADM 536 (692)
Q Consensus 498 ---------------~------------------~~l~~~~tv~e~~~~~~~~--------~~~~~~~~~L~~~~l~~~~ 536 (692)
. .......|+.|++...... ........+|+.+|+....
T Consensus 723 C~~c~g~g~i~v~m~~~~v~c~~C~GkRy~~e~L~~~~~~~tI~evL~mtv~ea~~~f~~~~~i~~~l~~L~~vGL~~l~ 802 (1809)
T PRK00635 723 CAECQGLGSITTTDNRTSIPCPSCLGKRFLPQVLEVRYKGKNIADILEMTAYEAEKFFLDEPSIHEKIHALCSLGLDYLP 802 (1809)
T ss_pred CCcceeeEEEEEecCCceEECCccCCcccCHHHHhhccCCCCHHHHHHcCHHHHHHcccChHHHHHHHHHHHHcCCcchh
Confidence 0 0112345677776543211 1111222578889995323
Q ss_pred ccccCCCCCHHHHHHHHHHHHhc---cCCcEEEEeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhccEE
Q 005532 537 LDRKVSLLSGGEKARLAFCKFMV---KPSTLLVLDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRV 610 (692)
Q Consensus 537 ~~~~~~~LSgGqkqrv~LAral~---~~p~lLlLDEPTn~LD~~~~~~l~~~l~~~---~~tviivSHd~~~l~~~~d~i 610 (692)
.++++.+|||||+|||+||++|+ .+|+||||||||++||+.+++.|.++|.++ +.|||+||||++++ ++||+|
T Consensus 803 l~q~~~tLSGGE~QRV~LAraL~~~~~~P~LLILDEPTsGLD~~~~~~Ll~lL~~L~~~G~TVIiIsHdl~~i-~~aDrV 881 (1809)
T PRK00635 803 LGRPLSSLSGGEIQRLKLAYELLAPSKKPTLYVLDEPTTGLHTHDIKALIYVLQSLTHQGHTVVIIEHNMHVV-KVADYV 881 (1809)
T ss_pred hcCccccCCHHHHHHHHHHHHHhhcCCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHH-HhCCEE
Confidence 68999999999999999999997 699999999999999999999999998765 45999999999999 789999
Q ss_pred EEEE------CCEEEEecCChhHHHH
Q 005532 611 VEVK------GSNLQDYAGDYNYYLE 630 (692)
Q Consensus 611 ~~l~------~g~l~~~~g~~~~~~~ 630 (692)
++|. +|+++ ..|+.+++..
T Consensus 882 i~L~p~gg~~~G~iv-~~Gtpeel~~ 906 (1809)
T PRK00635 882 LELGPEGGNLGGYLL-ASCSPEELIH 906 (1809)
T ss_pred EEEccCCCCCCCEEE-EeCCHHHHHh
Confidence 9996 56776 4687777654
No 102
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=6e-42 Score=350.30 Aligned_cols=205 Identities=28% Similarity=0.427 Sum_probs=173.4
Q ss_pred EEEEeEEEEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC-----------ceEEEE
Q 005532 98 VKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN-----------MKIAFL 166 (692)
Q Consensus 98 l~i~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~-----------~~i~~v 166 (692)
|+++|++++|+++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.. ..++|+
T Consensus 1 l~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i~~~ 80 (232)
T cd03218 1 LRAENLSKRYGKRKVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVKPDSGKILLDGQDITKLPMHKRARLGIGYL 80 (232)
T ss_pred CeEEEEEEEeCCEEeeccceeEecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccCCHhHHHhccEEEe
Confidence 468999999998889999999999999999999999999999999999999999999998632 249999
Q ss_pred cccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHHhhhc
Q 005532 167 SQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPEL 246 (692)
Q Consensus 167 ~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~l 246 (692)
+|++.+++..|+++|+...... .. ........++.++++.+
T Consensus 81 ~q~~~~~~~~tv~~~l~~~~~~---------------~~------------------------~~~~~~~~~~~~~l~~~ 121 (232)
T cd03218 81 PQEASIFRKLTVEENILAVLEI---------------RG------------------------LSKKEREEKLEELLEEF 121 (232)
T ss_pred cCCccccccCcHHHHHHHHHHh---------------cC------------------------CCHHHHHHHHHHHHHHc
Confidence 9999887788999998532100 00 00011234566778888
Q ss_pred CCCccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHc---cCCCeEEEEecCHHHHHhhc
Q 005532 247 GFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG---KQDVPMVIISHDRAFLDQLC 323 (692)
Q Consensus 247 gl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~---~~~~tvI~vsHd~~~l~~~~ 323 (692)
|+. +..++++.+|||||||||+|||||+.+|++|||||||++||+.+++++.++|+ +.+.|||++|||++++..+|
T Consensus 122 ~l~-~~~~~~~~~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~~~~~~~ 200 (232)
T cd03218 122 HIT-HLRKSKASSLSGGERRRVEIARALATNPKFLLLDEPFAGVDPIAVQDIQKIIKILKDRGIGVLITDHNVRETLSIT 200 (232)
T ss_pred CCh-hhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhC
Confidence 986 56788899999999999999999999999999999999999999999988764 35889999999999999999
Q ss_pred CeEEEEecceEEEeccChHH
Q 005532 324 TKIVETEMGVSRTYEGNYSQ 343 (692)
Q Consensus 324 d~i~~l~~G~~~~~~G~y~~ 343 (692)
|+|+++++|++. +.|..++
T Consensus 201 d~i~~l~~G~i~-~~~~~~~ 219 (232)
T cd03218 201 DRAYIIYEGKVL-AEGTPEE 219 (232)
T ss_pred CEEEEEECCeEE-EEeCHHH
Confidence 999999999974 5666543
No 103
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=7.6e-42 Score=351.43 Aligned_cols=207 Identities=24% Similarity=0.419 Sum_probs=175.8
Q ss_pred EEEEeEEEEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC------------ceEEE
Q 005532 98 VKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN------------MKIAF 165 (692)
Q Consensus 98 l~i~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~------------~~i~~ 165 (692)
|+++|++++|+++++|+|+||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|.+ ..++|
T Consensus 2 l~~~~l~~~~~~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~ 81 (240)
T PRK09493 2 IEFKNVSKHFGPTQVLHNIDLNIDQGEVVVIIGPSGSGKSTLLRCINKLEEITSGDLIVDGLKVNDPKVDERLIRQEAGM 81 (240)
T ss_pred EEEEeEEEEECCeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCChhHHHHhhceEE
Confidence 789999999998889999999999999999999999999999999999999999999998732 25999
Q ss_pred EcccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHHhhh
Q 005532 166 LSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPE 245 (692)
Q Consensus 166 v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~ 245 (692)
++|++.+++..||.+|+...... .. ..+......++.++++.
T Consensus 82 ~~q~~~~~~~~tv~~~l~~~~~~--------------~~------------------------~~~~~~~~~~~~~~l~~ 123 (240)
T PRK09493 82 VFQQFYLFPHLTALENVMFGPLR--------------VR------------------------GASKEEAEKQARELLAK 123 (240)
T ss_pred EecccccCCCCcHHHHHHhHHHH--------------hc------------------------CCCHHHHHHHHHHHHHH
Confidence 99999887888999998522100 00 00111223456678888
Q ss_pred cCCCccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHc---cCCCeEEEEecCHHHHHhh
Q 005532 246 LGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG---KQDVPMVIISHDRAFLDQL 322 (692)
Q Consensus 246 lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~---~~~~tvI~vsHd~~~l~~~ 322 (692)
+|+. ...++++.+|||||||||+|||||+.+|+||||||||++||+.+++++.++|+ +.++|||+|||+++++..+
T Consensus 124 ~gl~-~~~~~~~~~LS~G~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~ 202 (240)
T PRK09493 124 VGLA-ERAHHYPSELSGGQQQRVAIARALAVKPKLMLFDEPTSALDPELRHEVLKVMQDLAEEGMTMVIVTHEIGFAEKV 202 (240)
T ss_pred cCCh-HHHhcChhhcCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHh
Confidence 9986 46688899999999999999999999999999999999999999999988774 3589999999999999999
Q ss_pred cCeEEEEecceEEEeccChHHH
Q 005532 323 CTKIVETEMGVSRTYEGNYSQY 344 (692)
Q Consensus 323 ~d~i~~l~~G~~~~~~G~y~~~ 344 (692)
||+|+++++|++. +.|.+.++
T Consensus 203 ~d~i~~l~~G~i~-~~g~~~~~ 223 (240)
T PRK09493 203 ASRLIFIDKGRIA-EDGDPQVL 223 (240)
T ss_pred CCEEEEEECCEEE-eeCCHHHH
Confidence 9999999999984 66776554
No 104
>PRK10908 cell division protein FtsE; Provisional
Probab=100.00 E-value=6.1e-42 Score=348.02 Aligned_cols=198 Identities=26% Similarity=0.465 Sum_probs=168.9
Q ss_pred EEEEeEEEEe-CCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC-------------ceE
Q 005532 98 VKLENISKSY-KGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN-------------MKI 163 (692)
Q Consensus 98 l~i~~ls~~y-~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~-------------~~i 163 (692)
|+++|+++.| +++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.+ ..+
T Consensus 2 l~~~~l~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~i 81 (222)
T PRK10908 2 IRFEHVSKAYLGGRQALQGVTFHMRPGEMAFLTGHSGAGKSTLLKLICGIERPSAGKIWFSGHDITRLKNREVPFLRRQI 81 (222)
T ss_pred EEEEeeEEEecCCCeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccCChhHHHHHHhhe
Confidence 7899999999 66789999999999999999999999999999999999999999999998742 258
Q ss_pred EEEcccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHHh
Q 005532 164 AFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLM 243 (692)
Q Consensus 164 ~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll 243 (692)
+|++|++.+++..|+.+|+..... .. ..+......++.+++
T Consensus 82 ~~~~q~~~~~~~~tv~~~l~~~~~---------------~~------------------------~~~~~~~~~~~~~~l 122 (222)
T PRK10908 82 GMIFQDHHLLMDRTVYDNVAIPLI---------------IA------------------------GASGDDIRRRVSAAL 122 (222)
T ss_pred EEEecCccccccccHHHHHHhHHH---------------hc------------------------CCCHHHHHHHHHHHH
Confidence 999999988788999999853110 00 001112233456778
Q ss_pred hhcCCCccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHc---cCCCeEEEEecCHHHHH
Q 005532 244 PELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG---KQDVPMVIISHDRAFLD 320 (692)
Q Consensus 244 ~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~---~~~~tvI~vsHd~~~l~ 320 (692)
+.+|+. ...++++.+|||||||||+|||||+.+|++|||||||++||+.+++.+.++|+ +.+.|||+||||++++.
T Consensus 123 ~~~~l~-~~~~~~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~ 201 (222)
T PRK10908 123 DKVGLL-DKAKNFPIQLSGGEQQRVGIARAVVNKPAVLLADEPTGNLDDALSEGILRLFEEFNRVGVTVLMATHDIGLIS 201 (222)
T ss_pred HHcCCh-hhhhCCchhCCHHHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 888886 46788899999999999999999999999999999999999999999887765 34789999999999999
Q ss_pred hhcCeEEEEecceEE
Q 005532 321 QLCTKIVETEMGVSR 335 (692)
Q Consensus 321 ~~~d~i~~l~~G~~~ 335 (692)
.+||+|+++++|++.
T Consensus 202 ~~~d~i~~l~~G~i~ 216 (222)
T PRK10908 202 RRSYRMLTLSDGHLH 216 (222)
T ss_pred HhCCEEEEEECCEEc
Confidence 999999999999874
No 105
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=6e-42 Score=347.47 Aligned_cols=203 Identities=29% Similarity=0.447 Sum_probs=171.4
Q ss_pred EEEEeEEEEeCC--eeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC---------ceEEEE
Q 005532 98 VKLENISKSYKG--VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN---------MKIAFL 166 (692)
Q Consensus 98 l~i~~ls~~y~~--~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~---------~~i~~v 166 (692)
|+++|+++.|++ +++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.. ..++|+
T Consensus 1 l~~~~l~~~~~~~~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~i~~v 80 (220)
T cd03263 1 LQIRNLTKTYKKGTKPAVDDLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELRPTSGTAYINGYSIRTDRKAARQSLGYC 80 (220)
T ss_pred CEEEeeEEEeCCCCceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccchHHHhhhEEEe
Confidence 568999999987 789999999999999999999999999999999999999999999998743 249999
Q ss_pred cccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHHhhhc
Q 005532 167 SQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPEL 246 (692)
Q Consensus 167 ~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~l 246 (692)
+|++.+++..|+.+|+..... .. .........++.++++.+
T Consensus 81 ~q~~~~~~~~tv~~~l~~~~~---------------~~------------------------~~~~~~~~~~~~~~l~~~ 121 (220)
T cd03263 81 PQFDALFDELTVREHLRFYAR---------------LK------------------------GLPKSEIKEEVELLLRVL 121 (220)
T ss_pred cCcCCccccCCHHHHHHHHHH---------------Hc------------------------CCCHHHHHHHHHHHHHHc
Confidence 999988778899999742110 00 001111234566778888
Q ss_pred CCCccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc--CCCeEEEEecCHHHHHhhcC
Q 005532 247 GFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVIISHDRAFLDQLCT 324 (692)
Q Consensus 247 gl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~--~~~tvI~vsHd~~~l~~~~d 324 (692)
|+. +..++++.+|||||+|||+|||||+.+|++|||||||++||+.+++++.++|++ .+.|||++||+++++..+||
T Consensus 122 ~l~-~~~~~~~~~LS~G~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d 200 (220)
T cd03263 122 GLT-DKANKRARTLSGGMKRKLSLAIALIGGPSVLLLDEPTSGLDPASRRAIWDLILEVRKGRSIILTTHSMDEAEALCD 200 (220)
T ss_pred CCH-HHHhChhhhCCHHHHHHHHHHHHHhcCCCEEEECCCCCCCCHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhcC
Confidence 886 566888999999999999999999999999999999999999999999988753 35899999999999999999
Q ss_pred eEEEEecceEEEeccCh
Q 005532 325 KIVETEMGVSRTYEGNY 341 (692)
Q Consensus 325 ~i~~l~~G~~~~~~G~y 341 (692)
+++++++|++. ..|..
T Consensus 201 ~i~~l~~g~i~-~~~~~ 216 (220)
T cd03263 201 RIAIMSDGKLR-CIGSP 216 (220)
T ss_pred EEEEEECCEEE-ecCCH
Confidence 99999999974 44543
No 106
>PRK11248 tauB taurine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6e-42 Score=355.11 Aligned_cols=199 Identities=24% Similarity=0.335 Sum_probs=170.2
Q ss_pred cEEEEeEEEEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC-----ceEEEEcccCc
Q 005532 97 GVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN-----MKIAFLSQEFE 171 (692)
Q Consensus 97 ~l~i~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~-----~~i~~v~Q~~~ 171 (692)
+|+++|+++.|+++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.+ ..++|++|++.
T Consensus 1 ml~~~~l~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~v~q~~~ 80 (255)
T PRK11248 1 MLQISHLYADYGGKPALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVPYQHGSITLDGKPVEGPGAERGVVFQNEG 80 (255)
T ss_pred CEEEEEEEEEeCCeeeEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCCcEEEEeCCCc
Confidence 3889999999988889999999999999999999999999999999999999999999998743 25899999998
Q ss_pred cCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHHhhhcCCCcc
Q 005532 172 VSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFTAD 251 (692)
Q Consensus 172 ~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl~~~ 251 (692)
+++..||.+|+..... .. .........++.++++.+|+. .
T Consensus 81 ~~~~~tv~e~l~~~~~---------------~~------------------------~~~~~~~~~~~~~~l~~~gl~-~ 120 (255)
T PRK11248 81 LLPWRNVQDNVAFGLQ---------------LA------------------------GVEKMQRLEIAHQMLKKVGLE-G 120 (255)
T ss_pred cCCCCcHHHHHHhHHH---------------Hc------------------------CCCHHHHHHHHHHHHHHcCCh-h
Confidence 8777899999853210 00 001111234567888899996 4
Q ss_pred ccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc----CCCeEEEEecCHHHHHhhcCeEE
Q 005532 252 DGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVIISHDRAFLDQLCTKIV 327 (692)
Q Consensus 252 ~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~----~~~tvI~vsHd~~~l~~~~d~i~ 327 (692)
..++++.+|||||||||+|||||+.+|++|||||||++||+.++.++.++|++ .++|||+||||++++..+||+|+
T Consensus 121 ~~~~~~~~LSgGq~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~g~tviivsH~~~~~~~~~d~i~ 200 (255)
T PRK11248 121 AEKRYIWQLSGGQRQRVGIARALAANPQLLLLDEPFGALDAFTREQMQTLLLKLWQETGKQVLLITHDIEEAVFMATELV 200 (255)
T ss_pred HhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEE
Confidence 66888999999999999999999999999999999999999999999887753 38899999999999999999999
Q ss_pred EEe--cceEE
Q 005532 328 ETE--MGVSR 335 (692)
Q Consensus 328 ~l~--~G~~~ 335 (692)
+++ +|++.
T Consensus 201 ~l~~~~G~i~ 210 (255)
T PRK11248 201 LLSPGPGRVV 210 (255)
T ss_pred EEeCCCcEEE
Confidence 998 48763
No 107
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=100.00 E-value=5.6e-42 Score=355.26 Aligned_cols=198 Identities=24% Similarity=0.398 Sum_probs=171.4
Q ss_pred CcEEEEeEEEEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC-----ceEEEEcccC
Q 005532 96 SGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN-----MKIAFLSQEF 170 (692)
Q Consensus 96 ~~l~i~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~-----~~i~~v~Q~~ 170 (692)
+.|+++|++++|+++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.. ..++|++|++
T Consensus 11 ~~l~i~~l~~~~~~~~il~~isl~i~~Ge~~~I~G~NGsGKSTLlk~l~Gl~~p~~G~i~~~g~~~~~~~~~i~~v~q~~ 90 (257)
T PRK11247 11 TPLLLNAVSKRYGERTVLNQLDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLETPSAGELLAGTAPLAEAREDTRLMFQDA 90 (257)
T ss_pred CcEEEEEEEEEECCcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEHHHhhCceEEEecCc
Confidence 45999999999998889999999999999999999999999999999999999999999987643 3699999999
Q ss_pred ccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHHhhhcCCCc
Q 005532 171 EVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFTA 250 (692)
Q Consensus 171 ~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl~~ 250 (692)
.+++..||.||+...+.. ....++.++++.+|+.
T Consensus 91 ~l~~~~tv~enl~~~~~~---------------------------------------------~~~~~~~~~l~~~gl~- 124 (257)
T PRK11247 91 RLLPWKKVIDNVGLGLKG---------------------------------------------QWRDAALQALAAVGLA- 124 (257)
T ss_pred cCCCCCcHHHHHHhcccc---------------------------------------------hHHHHHHHHHHHcCCh-
Confidence 887778999998532100 0123455677888886
Q ss_pred cccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc----CCCeEEEEecCHHHHHhhcCeE
Q 005532 251 DDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVIISHDRAFLDQLCTKI 326 (692)
Q Consensus 251 ~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~----~~~tvI~vsHd~~~l~~~~d~i 326 (692)
...++++.+|||||||||+|||||+.+|++|||||||++||+.++..+.++|++ .++|||+||||++++..+||+|
T Consensus 125 ~~~~~~~~~LSgGqkqrl~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tviivsHd~~~~~~~~d~i 204 (257)
T PRK11247 125 DRANEWPAALSGGQKQRVALARALIHRPGLLLLDEPLGALDALTRIEMQDLIESLWQQHGFTVLLVTHDVSEAVAMADRV 204 (257)
T ss_pred hHhcCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEE
Confidence 466888999999999999999999999999999999999999999999887743 4899999999999999999999
Q ss_pred EEEecceEEEeccC
Q 005532 327 VETEMGVSRTYEGN 340 (692)
Q Consensus 327 ~~l~~G~~~~~~G~ 340 (692)
+++++|++. +.|.
T Consensus 205 ~~l~~G~i~-~~~~ 217 (257)
T PRK11247 205 LLIEEGKIG-LDLT 217 (257)
T ss_pred EEEECCEEE-eecc
Confidence 999999974 3443
No 108
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.4e-42 Score=350.37 Aligned_cols=204 Identities=32% Similarity=0.534 Sum_probs=173.3
Q ss_pred EEEEeEEEEeCCe----eceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC-------------
Q 005532 98 VKLENISKSYKGV----TVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN------------- 160 (692)
Q Consensus 98 l~i~~ls~~y~~~----~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~------------- 160 (692)
|+++|++++|+++ ++|+++||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.+
T Consensus 2 i~~~~l~~~~~~~~~~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (233)
T cd03258 2 IELKNVSKVFGDTGGKVTALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLERPTSGSVLVDGTDLTLLSGKELRKAR 81 (233)
T ss_pred eEEecceEEccCCCCceeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHHH
Confidence 7899999999876 89999999999999999999999999999999999999999999998642
Q ss_pred ceEEEEcccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHH
Q 005532 161 MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVS 240 (692)
Q Consensus 161 ~~i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 240 (692)
..|+|++|++.+++..|+.+|+...+.. . ..........+.
T Consensus 82 ~~i~~~~q~~~~~~~~t~~e~l~~~~~~---------------~------------------------~~~~~~~~~~~~ 122 (233)
T cd03258 82 RRIGMIFQHFNLLSSRTVFENVALPLEI---------------A------------------------GVPKAEIEERVL 122 (233)
T ss_pred hheEEEccCcccCCCCcHHHHHHHHHHH---------------c------------------------CCCHHHHHHHHH
Confidence 2599999999887788999998532100 0 000111234566
Q ss_pred HHhhhcCCCccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc----CCCeEEEEecCH
Q 005532 241 KLMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVIISHDR 316 (692)
Q Consensus 241 ~ll~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~----~~~tvI~vsHd~ 316 (692)
++++.+|+. ...++++.+|||||||||+|||||+.+|++|||||||++||+.++.++.++|++ .+.|||+|||++
T Consensus 123 ~~l~~~~l~-~~~~~~~~~LS~G~~qrv~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~ 201 (233)
T cd03258 123 ELLELVGLE-DKADAYPAQLSGGQKQRVGIARALANNPKVLLCDEATSALDPETTQSILALLRDINRELGLTIVLITHEM 201 (233)
T ss_pred HHHHHCCCh-hhhhcChhhCCHHHHHHHHHHHHHhcCCCEEEecCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCH
Confidence 788888986 567888999999999999999999999999999999999999999999887753 388999999999
Q ss_pred HHHHhhcCeEEEEecceEEEeccChH
Q 005532 317 AFLDQLCTKIVETEMGVSRTYEGNYS 342 (692)
Q Consensus 317 ~~l~~~~d~i~~l~~G~~~~~~G~y~ 342 (692)
+++..+||+++++++|++. ..|...
T Consensus 202 ~~~~~~~d~i~~l~~G~i~-~~~~~~ 226 (233)
T cd03258 202 EVVKRICDRVAVMEKGEVV-EEGTVE 226 (233)
T ss_pred HHHHHhCCEEEEEECCEEE-EecCHH
Confidence 9999999999999999984 556543
No 109
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=100.00 E-value=5.5e-42 Score=346.17 Aligned_cols=196 Identities=28% Similarity=0.450 Sum_probs=167.0
Q ss_pred EEEEeEEEEeCC-eeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC-------------ceE
Q 005532 98 VKLENISKSYKG-VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN-------------MKI 163 (692)
Q Consensus 98 l~i~~ls~~y~~-~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~-------------~~i 163 (692)
|+++|+++.|++ +++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.+ ..|
T Consensus 1 l~~~~l~~~~~~~~~~l~~~sl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~i 80 (214)
T cd03292 1 IEFINVTKTYPNGTAALDGINISISAGEFVFLVGPSGAGKSTLLKLIYKEELPTSGTIRVNGQDVSDLRGRAIPYLRRKI 80 (214)
T ss_pred CEEEEEEEEeCCCceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcccCCHHHHHHHHHhe
Confidence 468999999975 579999999999999999999999999999999999999999999998642 259
Q ss_pred EEEcccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHHh
Q 005532 164 AFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLM 243 (692)
Q Consensus 164 ~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll 243 (692)
+|++|++.+++..|+.+|+...... . .........++.+++
T Consensus 81 ~~v~q~~~~~~~~t~~~~l~~~~~~---------------~------------------------~~~~~~~~~~~~~~l 121 (214)
T cd03292 81 GVVFQDFRLLPDRNVYENVAFALEV---------------T------------------------GVPPREIRKRVPAAL 121 (214)
T ss_pred EEEecCchhccCCcHHHHHHHHHHH---------------c------------------------CCCHHHHHHHHHHHH
Confidence 9999999887888999998532100 0 000112234566788
Q ss_pred hhcCCCccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc---CCCeEEEEecCHHHHH
Q 005532 244 PELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK---QDVPMVIISHDRAFLD 320 (692)
Q Consensus 244 ~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~---~~~tvI~vsHd~~~l~ 320 (692)
+.+|+. ...++++.+||||||||++|||||+.+|+||||||||++||+.+++++.+.|++ .+.|||+||||++++.
T Consensus 122 ~~~~l~-~~~~~~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tiiivtH~~~~~~ 200 (214)
T cd03292 122 ELVGLS-HKHRALPAELSGGEQQRVAIARAIVNSPTILIADEPTGNLDPDTTWEIMNLLKKINKAGTTVVVATHAKELVD 200 (214)
T ss_pred HHcCCH-HHhhCChhhcCHHHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHH
Confidence 888886 466888999999999999999999999999999999999999999999887753 4799999999999999
Q ss_pred hhcCeEEEEecce
Q 005532 321 QLCTKIVETEMGV 333 (692)
Q Consensus 321 ~~~d~i~~l~~G~ 333 (692)
.+||+|+++++|+
T Consensus 201 ~~~d~i~~l~~G~ 213 (214)
T cd03292 201 TTRHRVIALERGK 213 (214)
T ss_pred HhCCEEEEEeCCc
Confidence 9999999999886
No 110
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=6e-42 Score=344.51 Aligned_cols=194 Identities=32% Similarity=0.477 Sum_probs=168.7
Q ss_pred EEEEeEEEEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCCc--------eEEEEccc
Q 005532 98 VKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSNM--------KIAFLSQE 169 (692)
Q Consensus 98 l~i~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~~--------~i~~v~Q~ 169 (692)
|+++|++++|+++++|+++||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.+. .++|++|+
T Consensus 1 l~~~~l~~~~~~~~~l~~~~~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~i~~~~q~ 80 (208)
T cd03268 1 LKTNDLTKTYGKKRVLDDISLHVKKGEIYGFLGPNGAGKTTTMKIILGLIKPDSGEITFDGKSYQKNIEALRRIGALIEA 80 (208)
T ss_pred CEEEEEEEEECCeEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCCcccchHHHHhhEEEecCC
Confidence 4689999999888999999999999999999999999999999999999999999999987542 59999999
Q ss_pred CccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHHhhhcCCC
Q 005532 170 FEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFT 249 (692)
Q Consensus 170 ~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl~ 249 (692)
+.+++..|+.||+...... .. .-..++.++++.+|+.
T Consensus 81 ~~~~~~~tv~e~l~~~~~~-----------------------------------------~~--~~~~~~~~~l~~~~l~ 117 (208)
T cd03268 81 PGFYPNLTARENLRLLARL-----------------------------------------LG--IRKKRIDEVLDVVGLK 117 (208)
T ss_pred CccCccCcHHHHHHHHHHh-----------------------------------------cC--CcHHHHHHHHHHcCCH
Confidence 9887889999998532100 00 0023455677888885
Q ss_pred ccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc---CCCeEEEEecCHHHHHhhcCeE
Q 005532 250 ADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK---QDVPMVIISHDRAFLDQLCTKI 326 (692)
Q Consensus 250 ~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~---~~~tvI~vsHd~~~l~~~~d~i 326 (692)
...++++.+|||||||||+|||||+.+|++|||||||++||+.+++++.++|++ .+.|||+||||++++..+||++
T Consensus 118 -~~~~~~~~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~v 196 (208)
T cd03268 118 -DSAKKKVKGFSLGMKQRLGIALALLGNPDLLILDEPTNGLDPDGIKELRELILSLRDQGITVLISSHLLSEIQKVADRI 196 (208)
T ss_pred -HHHhhhHhhCCHHHHHHHHHHHHHhcCCCEEEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHHhcCEE
Confidence 466888999999999999999999999999999999999999999999887753 5889999999999999999999
Q ss_pred EEEecceEE
Q 005532 327 VETEMGVSR 335 (692)
Q Consensus 327 ~~l~~G~~~ 335 (692)
+++++|++.
T Consensus 197 ~~l~~g~i~ 205 (208)
T cd03268 197 GIINKGKLI 205 (208)
T ss_pred EEEECCEEE
Confidence 999999863
No 111
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=4e-42 Score=361.44 Aligned_cols=205 Identities=30% Similarity=0.481 Sum_probs=181.0
Q ss_pred ceEEEEeEEEEcCCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccce--------eeeec
Q 005532 423 SVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL--------PNYFE 494 (692)
Q Consensus 423 ~~l~~~~l~~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~~--------~~~~~ 494 (692)
..|+++||++.||+..+++++||+|..||+++|+||||||||||||+|+|+.+|++|+|.++|.++. +++++
T Consensus 2 ~~i~l~~v~K~yg~~~~l~~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~~~~G~I~i~g~~vt~l~P~~R~iamVF 81 (338)
T COG3839 2 AELELKNVRKSFGSFEVLKDVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEEPTSGEILIDGRDVTDLPPEKRGIAMVF 81 (338)
T ss_pred cEEEEeeeEEEcCCceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChhHCCEEEEe
Confidence 3589999999998765999999999999999999999999999999999999999999999998763 35667
Q ss_pred ccchhhcCCCccHHHHHHHHhccc------cHHHHHHHHhhcCCCcccccccCCCCCHHHHHHHHHHHHhccCCcEEEEe
Q 005532 495 QNQAEALDLDKTVLETVAEAAEDW------RIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLD 568 (692)
Q Consensus 495 q~~~~~l~~~~tv~e~~~~~~~~~------~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~LAral~~~p~lLlLD 568 (692)
|+ +.+.|.+||++|+.+..... ...++.+.++.+++ .+.+++++.+|||||||||+|||||+++|+++|||
T Consensus 82 Q~--yALyPhmtV~~Niaf~Lk~~~~~k~ei~~rV~eva~~L~l-~~lL~r~P~~LSGGQrQRVAlaRAlVr~P~v~L~D 158 (338)
T COG3839 82 QN--YALYPHMTVYENIAFGLKLRGVPKAEIDKRVKEVAKLLGL-EHLLNRKPLQLSGGQRQRVALARALVRKPKVFLLD 158 (338)
T ss_pred CC--ccccCCCcHHHHhhhhhhhCCCchHHHHHHHHHHHHHcCC-hhHHhcCcccCChhhHHHHHHHHHHhcCCCEEEec
Confidence 65 57899999999998865422 13468889999999 47899999999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHh----cCceEEEEecCHHHHHhhccEEEEEECCEEEEecCChhHHHH
Q 005532 569 EPTNHLDIPSKEMLEEAISE----YKGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYYLE 630 (692)
Q Consensus 569 EPTn~LD~~~~~~l~~~l~~----~~~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~~~~~ 630 (692)
||+++||...+..+...|++ ++.|+|+||||..++..++|||++|++|++..+..+-+-|.+
T Consensus 159 EPlSnLDa~lR~~mr~ei~~lh~~l~~T~IYVTHDq~EAmtladri~Vm~~G~i~Q~g~p~ely~~ 224 (338)
T COG3839 159 EPLSNLDAKLRVLMRSEIKKLHERLGTTTIYVTHDQVEAMTLADRIVVMNDGRIQQVGTPLELYER 224 (338)
T ss_pred CchhHhhHHHHHHHHHHHHHHHHhcCCcEEEEcCCHHHHHhhCCEEEEEeCCeeeecCChHHHhhC
Confidence 99999999999887777664 467999999999999999999999999999987666666643
No 112
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-41 Score=361.43 Aligned_cols=208 Identities=22% Similarity=0.342 Sum_probs=173.4
Q ss_pred cEEEEeEEEEeCCe-----eceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC-----------
Q 005532 97 GVKLENISKSYKGV-----TVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN----------- 160 (692)
Q Consensus 97 ~l~i~~ls~~y~~~-----~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~----------- 160 (692)
.|+++|++++|++. ++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.+
T Consensus 2 ~i~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~iiG~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 81 (305)
T PRK13651 2 QIKVKNIVKIFNKKLPTELKALDNVSVEINQGEFIAIIGQTGSGKTTFIEHLNALLLPDTGTIEWIFKDEKNKKKTKEKE 81 (305)
T ss_pred EEEEEEEEEEECCCCCccccceeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEEeceeccccccccccc
Confidence 38999999999753 59999999999999999999999999999999999999999999986421
Q ss_pred -----------------------ceEEEEcccCc-cCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHH
Q 005532 161 -----------------------MKIAFLSQEFE-VSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRL 216 (692)
Q Consensus 161 -----------------------~~i~~v~Q~~~-~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 216 (692)
..|||++|+|. .++..||.+|+......
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~e~i~~~~~~---------------------------- 133 (305)
T PRK13651 82 KVLEKLVIQKTRFKKIKKIKEIRRRVGVVFQFAEYQLFEQTIEKDIIFGPVS---------------------------- 133 (305)
T ss_pred ccccccccccccccccchHHHHHhceEEEeeCcccccccccHHHHHHhhHHH----------------------------
Confidence 24899999873 33457999998522100
Q ss_pred HHHHHHHHHHHhhcCcccHHHHHHHHhhhcCCCccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHH
Q 005532 217 LDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIE 296 (692)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~ 296 (692)
...+.....+++.++++.+|+.....++++.+|||||||||+|||||+.+|+||||||||++||+.++.
T Consensus 134 -----------~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~~LSgGqkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~ 202 (305)
T PRK13651 134 -----------MGVSKEEAKKRAAKYIELVGLDESYLQRSPFELSGGQKRRVALAGILAMEPDFLVFDEPTAGLDPQGVK 202 (305)
T ss_pred -----------cCCCHHHHHHHHHHHHHHcCCChhhhhCChhhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHH
Confidence 001112334567788999999655789999999999999999999999999999999999999999999
Q ss_pred HHHHHHc---cCCCeEEEEecCHHHHHhhcCeEEEEecceEEEeccChHHH
Q 005532 297 WLEGYLG---KQDVPMVIISHDRAFLDQLCTKIVETEMGVSRTYEGNYSQY 344 (692)
Q Consensus 297 ~L~~~L~---~~~~tvI~vsHd~~~l~~~~d~i~~l~~G~~~~~~G~y~~~ 344 (692)
++.++|+ +.|.|||+||||++++..+||+|++|++|++. +.|...++
T Consensus 203 ~l~~~l~~l~~~g~tiiivtHd~~~~~~~adrv~vl~~G~i~-~~g~~~~~ 252 (305)
T PRK13651 203 EILEIFDNLNKQGKTIILVTHDLDNVLEWTKRTIFFKDGKII-KDGDTYDI 252 (305)
T ss_pred HHHHHHHHHHHCCCEEEEEeeCHHHHHHhCCEEEEEECCEEE-EECCHHHH
Confidence 9988764 35899999999999999999999999999974 56665443
No 113
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.4e-42 Score=360.51 Aligned_cols=208 Identities=22% Similarity=0.324 Sum_probs=173.9
Q ss_pred cEEEEeEEEEeCC-----eeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC-----------
Q 005532 97 GVKLENISKSYKG-----VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN----------- 160 (692)
Q Consensus 97 ~l~i~~ls~~y~~-----~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~----------- 160 (692)
.|+++|++|+|++ .++|+||||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|..
T Consensus 2 ~l~~~~l~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~ 81 (290)
T PRK13634 2 DITFQKVEHRYQYKTPFERRALYDVNVSIPSGSYVAIIGHTGSGKSTLLQHLNGLLQPTSGTVTIGERVITAGKKNKKLK 81 (290)
T ss_pred EEEEEEEEEEECCCCcccccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECccccccchHH
Confidence 3899999999974 469999999999999999999999999999999999999999999998742
Q ss_pred ---ceEEEEcccCc-cCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHH
Q 005532 161 ---MKIAFLSQEFE-VSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLD 236 (692)
Q Consensus 161 ---~~i~~v~Q~~~-~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (692)
..|+||+|+|. .++..||.+|+...... ...+.....
T Consensus 82 ~~~~~ig~v~q~~~~~l~~~tv~eni~~~~~~---------------------------------------~~~~~~~~~ 122 (290)
T PRK13634 82 PLRKKVGIVFQFPEHQLFEETVEKDICFGPMN---------------------------------------FGVSEEDAK 122 (290)
T ss_pred HHHhhEEEEeeCchhhhhhhhHHHHHHHHHHH---------------------------------------cCCCHHHHH
Confidence 25999999973 23457999998522100 001111233
Q ss_pred HHHHHHhhhcCCCccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc----CCCeEEEE
Q 005532 237 AKVSKLMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVII 312 (692)
Q Consensus 237 ~~i~~ll~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~----~~~tvI~v 312 (692)
+++.++++.+|+.....++++.+|||||||||+|||||+.+|+||||||||++||+.++.++.++|++ .|.|||+|
T Consensus 123 ~~~~~~l~~~gL~~~~~~~~~~~LSgGq~qrv~lAraL~~~P~llllDEPt~~LD~~~~~~l~~~L~~l~~~~g~tviii 202 (290)
T PRK13634 123 QKAREMIELVGLPEELLARSPFELSGGQMRRVAIAGVLAMEPEVLVLDEPTAGLDPKGRKEMMEMFYKLHKEKGLTTVLV 202 (290)
T ss_pred HHHHHHHHHCCCChhhhhCCcccCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEE
Confidence 46778889999964567899999999999999999999999999999999999999999999887743 48999999
Q ss_pred ecCHHHHHhhcCeEEEEecceEEEeccChHHH
Q 005532 313 SHDRAFLDQLCTKIVETEMGVSRTYEGNYSQY 344 (692)
Q Consensus 313 sHd~~~l~~~~d~i~~l~~G~~~~~~G~y~~~ 344 (692)
|||++++..+||+|++|++|++ .+.|...++
T Consensus 203 tHd~~~~~~~~drv~~l~~G~i-~~~g~~~~~ 233 (290)
T PRK13634 203 THSMEDAARYADQIVVMHKGTV-FLQGTPREI 233 (290)
T ss_pred eCCHHHHHHhCCEEEEEECCEE-EEECCHHHH
Confidence 9999999999999999999998 466776544
No 114
>cd03262 ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively. Histidine permease is a multisubunit complex containing the HisQ and HisM integral membrane subunits and two copies of HisP. HisP has properties intermediate between those of integral and peripheral membrane proteins and is accessible from both sides of the membrane, presumably by its interaction with HisQ and HisM. The two HisP subunits form a homodimer within the complex. The domain structure of the amino acid uptake systems is typical for prokaryote extracellular solute binding protein-dependent uptake systems. All of the amino acid uptake systems also have at least one, and in a few cases, two extracellular solute binding proteins located in the periplasm of Gram-negative bacteria, or attached to the cell membrane of Gram-positive bacteria. The best-studied member of the PAAT (polar amino acid transport) family is the HisJQM
Probab=100.00 E-value=5.4e-42 Score=345.99 Aligned_cols=197 Identities=29% Similarity=0.493 Sum_probs=168.1
Q ss_pred EEEEeEEEEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC------------ceEEE
Q 005532 98 VKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN------------MKIAF 165 (692)
Q Consensus 98 l~i~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~------------~~i~~ 165 (692)
|+++|++++|+++++|+++||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.+ ..|+|
T Consensus 1 l~~~~l~~~~~~~~~l~~~s~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~ 80 (213)
T cd03262 1 IEIKNLHKSFGDFHVLKGIDLTVKKGEVVVIIGPSGSGKSTLLRCINLLEEPDSGTIIIDGLKLTDDKKNINELRQKVGM 80 (213)
T ss_pred CEEEEEEEEECCeEeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCccchhHHHHHhcceE
Confidence 468999999998889999999999999999999999999999999999999999999998742 24999
Q ss_pred EcccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHHhhh
Q 005532 166 LSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPE 245 (692)
Q Consensus 166 v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~ 245 (692)
++|++.+++..|+.||+...... .. ..+......++.++++.
T Consensus 81 ~~q~~~~~~~~t~~e~l~~~~~~--------------~~------------------------~~~~~~~~~~~~~~l~~ 122 (213)
T cd03262 81 VFQQFNLFPHLTVLENITLAPIK--------------VK------------------------GMSKAEAEERALELLEK 122 (213)
T ss_pred EecccccCCCCcHHHHHHhHHHH--------------hc------------------------CCCHHHHHHHHHHHHHH
Confidence 99999887788999998532100 00 00011123455677888
Q ss_pred cCCCccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc---CCCeEEEEecCHHHHHhh
Q 005532 246 LGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK---QDVPMVIISHDRAFLDQL 322 (692)
Q Consensus 246 lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~---~~~tvI~vsHd~~~l~~~ 322 (692)
+|+. ...++++.+|||||+|||+|||||+.+|++|||||||+|||+.+++++.++|++ .+.|||++||+++++..+
T Consensus 123 ~~l~-~~~~~~~~~LS~G~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tvi~~sh~~~~~~~~ 201 (213)
T cd03262 123 VGLA-DKADAYPAQLSGGQQQRVAIARALAMNPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMVVVTHEMGFAREV 201 (213)
T ss_pred cCCH-hHhhhCccccCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHh
Confidence 8886 467889999999999999999999999999999999999999999999888753 578999999999999999
Q ss_pred cCeEEEEecce
Q 005532 323 CTKIVETEMGV 333 (692)
Q Consensus 323 ~d~i~~l~~G~ 333 (692)
||+|+++++|+
T Consensus 202 ~d~i~~l~~g~ 212 (213)
T cd03262 202 ADRVIFMDDGR 212 (213)
T ss_pred CCEEEEEeCCc
Confidence 99999999886
No 115
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=4.6e-42 Score=346.07 Aligned_cols=194 Identities=32% Similarity=0.477 Sum_probs=164.1
Q ss_pred EEeEEEEeCC--eeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC----------ceEEEEc
Q 005532 100 LENISKSYKG--VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN----------MKIAFLS 167 (692)
Q Consensus 100 i~~ls~~y~~--~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~----------~~i~~v~ 167 (692)
++|++++|++ +++|+++||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.. ..|+|++
T Consensus 2 ~~~l~~~~~~~~~~il~~vs~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~~~ 81 (211)
T cd03225 2 LKNLSFSYPDGARPALDDISLTIKKGEFVLIVGPNGSGKSTLLRLLNGLLGPTSGEVLVDGKDLTKLSLKELRRKVGLVF 81 (211)
T ss_pred ceeEEEecCCCCeeeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEcccCCHHHHHhhceEEe
Confidence 6899999987 789999999999999999999999999999999999999999999998742 2589999
Q ss_pred ccCcc-CCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHHhhhc
Q 005532 168 QEFEV-SMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPEL 246 (692)
Q Consensus 168 Q~~~~-~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~l 246 (692)
|++.. ++..|+.+|+...... . .........++.++++.+
T Consensus 82 q~~~~~~~~~t~~~~l~~~~~~---------------~------------------------~~~~~~~~~~~~~~l~~~ 122 (211)
T cd03225 82 QNPDDQFFGPTVEEEVAFGLEN---------------L------------------------GLPEEEIEERVEEALELV 122 (211)
T ss_pred cChhhhcCCCcHHHHHHHHHHH---------------c------------------------CCCHHHHHHHHHHHHHHc
Confidence 99753 5678999998532100 0 000111234566778888
Q ss_pred CCCccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc---CCCeEEEEecCHHHHHhhc
Q 005532 247 GFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK---QDVPMVIISHDRAFLDQLC 323 (692)
Q Consensus 247 gl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~---~~~tvI~vsHd~~~l~~~~ 323 (692)
|+. ...++++.+|||||||||+|||||+.+|++|||||||+|||+.+++++.++|++ .+.|||+||||++++..+|
T Consensus 123 ~l~-~~~~~~~~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tvi~~sH~~~~~~~~~ 201 (211)
T cd03225 123 GLE-GLRDRSPFTLSGGQKQRVAIAGVLAMDPDILLLDEPTAGLDPAGRRELLELLKKLKAEGKTIIIVTHDLDLLLELA 201 (211)
T ss_pred CcH-hhhcCCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhC
Confidence 986 567888999999999999999999999999999999999999999999888743 4789999999999999999
Q ss_pred CeEEEEecce
Q 005532 324 TKIVETEMGV 333 (692)
Q Consensus 324 d~i~~l~~G~ 333 (692)
|+|+++++|+
T Consensus 202 d~i~~l~~G~ 211 (211)
T cd03225 202 DRVIVLEDGK 211 (211)
T ss_pred CEEEEEeCCC
Confidence 9999998874
No 116
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-41 Score=350.04 Aligned_cols=208 Identities=26% Similarity=0.414 Sum_probs=176.2
Q ss_pred cEEEEeEEEEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC----------------
Q 005532 97 GVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN---------------- 160 (692)
Q Consensus 97 ~l~i~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~---------------- 160 (692)
.|+++|+++.|+++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|..
T Consensus 2 ~l~~~~l~~~~~~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~ 81 (242)
T PRK11124 2 SIQLNGINCFYGAHQALFDITLDCPQGETLVLLGPSGAGKSSLLRVLNLLEMPRSGTLNIAGNHFDFSKTPSDKAIRELR 81 (242)
T ss_pred EEEEEeeEEEECCeeeEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecccccccchhhHHHHH
Confidence 4899999999998889999999999999999999999999999999999999999999998742
Q ss_pred ceEEEEcccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHH
Q 005532 161 MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVS 240 (692)
Q Consensus 161 ~~i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 240 (692)
..|+|++|++.+++..|+.+|+...... .. .........++.
T Consensus 82 ~~i~~~~q~~~~~~~~tv~e~i~~~~~~--------------~~------------------------~~~~~~~~~~~~ 123 (242)
T PRK11124 82 RNVGMVFQQYNLWPHLTVQQNLIEAPCR--------------VL------------------------GLSKDQALARAE 123 (242)
T ss_pred hheEEEecCccccCCCcHHHHHHHHHHH--------------Hc------------------------CCCHHHHHHHHH
Confidence 1599999999887888999998521100 00 000011234566
Q ss_pred HHhhhcCCCccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc---CCCeEEEEecCHH
Q 005532 241 KLMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK---QDVPMVIISHDRA 317 (692)
Q Consensus 241 ~ll~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~---~~~tvI~vsHd~~ 317 (692)
++++.+|+. ...++++.+|||||||||+|||||+.+|+||||||||++||+.+++++.++|++ .++|||+||||++
T Consensus 124 ~~l~~~gl~-~~~~~~~~~LS~G~~qrv~laral~~~p~llilDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~ 202 (242)
T PRK11124 124 KLLERLRLK-PYADRFPLHLSGGQQQRVAIARALMMEPQVLLFDEPTAALDPEITAQIVSIIRELAETGITQVIVTHEVE 202 (242)
T ss_pred HHHHHcCCh-hhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH
Confidence 778888986 567888999999999999999999999999999999999999999999887753 5899999999999
Q ss_pred HHHhhcCeEEEEecceEEEeccChHHH
Q 005532 318 FLDQLCTKIVETEMGVSRTYEGNYSQY 344 (692)
Q Consensus 318 ~l~~~~d~i~~l~~G~~~~~~G~y~~~ 344 (692)
++..+||+++++++|++. +.|.+.++
T Consensus 203 ~~~~~~d~i~~l~~g~i~-~~~~~~~~ 228 (242)
T PRK11124 203 VARKTASRVVYMENGHIV-EQGDASCF 228 (242)
T ss_pred HHHHhcCEEEEEECCEEE-EeCCHHHh
Confidence 999999999999999984 66776543
No 117
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=1.1e-41 Score=371.84 Aligned_cols=212 Identities=30% Similarity=0.401 Sum_probs=178.8
Q ss_pred CcEEEEeEEEEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC----------ceEEE
Q 005532 96 SGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN----------MKIAF 165 (692)
Q Consensus 96 ~~l~i~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~----------~~i~~ 165 (692)
++|+++|++++|+++++|+|+||+|++||+++|+||||||||||||+|+|+++|++|+|.++|.. .+|||
T Consensus 2 ~~L~~~nls~~y~~~~vL~~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~p~sG~I~l~G~~i~~~~~~~~~~~ig~ 81 (402)
T PRK09536 2 PMIDVSDLSVEFGDTTVLDGVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLTPTAGTVLVAGDDVEALSARAASRRVAS 81 (402)
T ss_pred ceEEEeeEEEEECCEEEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhcCCCCCCcEEEECCEEcCcCCHHHHhcceEE
Confidence 36999999999999999999999999999999999999999999999999999999999998742 25999
Q ss_pred EcccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHHhhh
Q 005532 166 LSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPE 245 (692)
Q Consensus 166 v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~ 245 (692)
++|++.++++.||+||+........ ..+. .......+++.++++.
T Consensus 82 v~q~~~l~~~~tv~e~v~~~~~~~~----------~~~~-------------------------~~~~~~~~~v~~~le~ 126 (402)
T PRK09536 82 VPQDTSLSFEFDVRQVVEMGRTPHR----------SRFD-------------------------TWTETDRAAVERAMER 126 (402)
T ss_pred EccCCCCCCCCCHHHHHHhccchhc----------cccc-------------------------CCCHHHHHHHHHHHHH
Confidence 9999988889999999853210000 0000 0001123567788999
Q ss_pred cCCCccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHc---cCCCeEEEEecCHHHHHhh
Q 005532 246 LGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG---KQDVPMVIISHDRAFLDQL 322 (692)
Q Consensus 246 lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~---~~~~tvI~vsHd~~~l~~~ 322 (692)
+|+. +..++++.+|||||||||+|||||+++|+||||||||+|||+.++..+.++|+ +.++|||++|||++++.++
T Consensus 127 vgl~-~~~~~~~~~LSgGerQRv~IArAL~~~P~iLLLDEPtsgLD~~~~~~l~~lL~~l~~~g~TIIivsHdl~~~~~~ 205 (402)
T PRK09536 127 TGVA-QFADRPVTSLSGGERQRVLLARALAQATPVLLLDEPTASLDINHQVRTLELVRRLVDDGKTAVAAIHDLDLAARY 205 (402)
T ss_pred cCCc-hhhcCChhhCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHh
Confidence 9996 67789999999999999999999999999999999999999999998887764 3588999999999999999
Q ss_pred cCeEEEEecceEEEeccChHHH
Q 005532 323 CTKIVETEMGVSRTYEGNYSQY 344 (692)
Q Consensus 323 ~d~i~~l~~G~~~~~~G~y~~~ 344 (692)
||+++++++|++. +.|...++
T Consensus 206 adrii~l~~G~iv-~~G~~~ev 226 (402)
T PRK09536 206 CDELVLLADGRVR-AAGPPADV 226 (402)
T ss_pred CCEEEEEECCEEE-EecCHHHH
Confidence 9999999999984 56776443
No 118
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.2e-41 Score=350.45 Aligned_cols=205 Identities=28% Similarity=0.414 Sum_probs=173.5
Q ss_pred EEEEeEEEEeCC-eeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC----------ceEEEE
Q 005532 98 VKLENISKSYKG-VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN----------MKIAFL 166 (692)
Q Consensus 98 l~i~~ls~~y~~-~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~----------~~i~~v 166 (692)
|+++|++++|++ +++|+++||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.. ..++|+
T Consensus 1 l~~~~l~~~~~~~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~~ 80 (242)
T cd03295 1 IEFENVTKRYGGGKKAVNNLNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIEPTSGEIFIDGEDIREQDPVELRRKIGYV 80 (242)
T ss_pred CEEEEEEEEeCCcceEeeeeEEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCeEcCcCChHHhhcceEEE
Confidence 468999999988 789999999999999999999999999999999999999999999998742 258999
Q ss_pred cccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHHhhhc
Q 005532 167 SQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPEL 246 (692)
Q Consensus 167 ~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~l 246 (692)
+|++.+++..|+.+|+..... +. ..+......++.++++.+
T Consensus 81 ~q~~~~~~~~tv~e~l~~~~~---------------~~------------------------~~~~~~~~~~~~~~l~~l 121 (242)
T cd03295 81 IQQIGLFPHMTVEENIALVPK---------------LL------------------------KWPKEKIRERADELLALV 121 (242)
T ss_pred ccCccccCCCcHHHHHHHHHH---------------Hc------------------------CCCHHHHHHHHHHHHHHc
Confidence 999988778999999852100 00 001112234566788889
Q ss_pred CCCc-cccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc----CCCeEEEEecCHHHHHh
Q 005532 247 GFTA-DDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVIISHDRAFLDQ 321 (692)
Q Consensus 247 gl~~-~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~----~~~tvI~vsHd~~~l~~ 321 (692)
|+.+ ...++++.+|||||||||+|||||+.+|++|||||||++||+.+++++.+.|++ .+.|||+|||+++++..
T Consensus 122 ~l~~~~~~~~~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~g~tvii~sH~~~~~~~ 201 (242)
T cd03295 122 GLDPAEFADRYPHELSGGQQQRVGVARALAADPPLLLMDEPFGALDPITRDQLQEEFKRLQQELGKTIVFVTHDIDEAFR 201 (242)
T ss_pred CCCcHHHHhcChhhCCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHH
Confidence 9864 367888999999999999999999999999999999999999999999887753 38899999999999999
Q ss_pred hcCeEEEEecceEEEeccChH
Q 005532 322 LCTKIVETEMGVSRTYEGNYS 342 (692)
Q Consensus 322 ~~d~i~~l~~G~~~~~~G~y~ 342 (692)
+||+|+++++|++. +.|...
T Consensus 202 ~~d~i~~l~~G~i~-~~~~~~ 221 (242)
T cd03295 202 LADRIAIMKNGEIV-QVGTPD 221 (242)
T ss_pred hCCEEEEEECCEEE-EecCHH
Confidence 99999999999984 456543
No 119
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=7.3e-42 Score=352.11 Aligned_cols=213 Identities=27% Similarity=0.441 Sum_probs=174.5
Q ss_pred EEEEeEEEEeC-CeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC-------------ceE
Q 005532 98 VKLENISKSYK-GVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN-------------MKI 163 (692)
Q Consensus 98 l~i~~ls~~y~-~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~-------------~~i 163 (692)
|+++|++++|+ ++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.+ ..+
T Consensus 2 l~~~~l~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~i 81 (243)
T TIGR02315 2 LEVENLSKVYPNGKQALKNINLNINPGEFVAIIGPSGAGKSTLLRCINRLVEPSSGSILLEGTDITKLRGKKLRKLRRRI 81 (243)
T ss_pred eEEEeeeeecCCCcceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCccEEEECCEEhhhCCHHHHHHHHhhe
Confidence 78999999998 7789999999999999999999999999999999999999999999998742 249
Q ss_pred EEEcccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHHh
Q 005532 164 AFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLM 243 (692)
Q Consensus 164 ~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll 243 (692)
+|++|++.+++..||.+|+.......... . ..+ . .........++.+++
T Consensus 82 ~~v~q~~~~~~~~tv~~~l~~~~~~~~~~------~-~~~-------------~-----------~~~~~~~~~~~~~~l 130 (243)
T TIGR02315 82 GMIFQHYNLIERLTVLENVLHGRLGYKPT------W-RSL-------------L-----------GRFSEEDKERALSAL 130 (243)
T ss_pred EEEcCCCcccccccHHHHHhhcccccccc------h-hhh-------------h-----------ccccHHHHHHHHHHH
Confidence 99999998878889999985321100000 0 000 0 000011234567788
Q ss_pred hhcCCCccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc----CCCeEEEEecCHHHH
Q 005532 244 PELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVIISHDRAFL 319 (692)
Q Consensus 244 ~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~----~~~tvI~vsHd~~~l 319 (692)
+.+|+. ...++++.+|||||||||+|||||+.+|+||||||||++||+.+++++.++|++ .++|||+||||++++
T Consensus 131 ~~~~l~-~~~~~~~~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~tH~~~~~ 209 (243)
T TIGR02315 131 ERVGLA-DKAYQRADQLSGGQQQRVAIARALAQQPDLILADEPIASLDPKTSKQVMDYLKRINKEDGITVIINLHQVDLA 209 (243)
T ss_pred HHcCcH-hhhcCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHH
Confidence 888986 567888999999999999999999999999999999999999999999887753 378999999999999
Q ss_pred HhhcCeEEEEecceEEEeccChHH
Q 005532 320 DQLCTKIVETEMGVSRTYEGNYSQ 343 (692)
Q Consensus 320 ~~~~d~i~~l~~G~~~~~~G~y~~ 343 (692)
.++||+++++++|++. +.|...+
T Consensus 210 ~~~~d~v~~l~~G~i~-~~~~~~~ 232 (243)
T TIGR02315 210 KKYADRIVGLKAGEIV-FDGAPSE 232 (243)
T ss_pred HHhcCeEEEEECCEEE-ecCCHHH
Confidence 9999999999999974 5676543
No 120
>PRK11147 ABC transporter ATPase component; Reviewed
Probab=100.00 E-value=4.6e-41 Score=390.64 Aligned_cols=210 Identities=32% Similarity=0.572 Sum_probs=175.3
Q ss_pred ceEEEEeEEEEcCCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccceeeeecccchhhcC
Q 005532 423 SVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQNQAEALD 502 (692)
Q Consensus 423 ~~l~~~~l~~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~~~~~~~q~~~~~l~ 502 (692)
.+|+++||+++|+++.+|+|+||+|++|+++||+|||||||||||++|+|+++|++|+|.+++ ....+++.|... ..
T Consensus 2 ~~l~i~~ls~~~~~~~il~~is~~i~~Ge~v~LvG~NGsGKSTLLriiaG~~~p~~G~I~~~~-~~~~~~l~q~~~--~~ 78 (635)
T PRK11147 2 SLISIHGAWLSFSDAPLLDNAELHIEDNERVCLVGRNGAGKSTLMKILNGEVLLDDGRIIYEQ-DLIVARLQQDPP--RN 78 (635)
T ss_pred cEEEEeeEEEEeCCceeEeCcEEEECCCCEEEEECCCCCCHHHHHHHHcCCCCCCCeEEEeCC-CCEEEEeccCCC--CC
Confidence 369999999999988999999999999999999999999999999999999999999999976 333445444311 11
Q ss_pred CCccHHHHH------------------------------HHHh---------cccc-HHHHHHHHhhcCCCcccccccCC
Q 005532 503 LDKTVLETV------------------------------AEAA---------EDWR-IDDIKGLLGRCNFKADMLDRKVS 542 (692)
Q Consensus 503 ~~~tv~e~~------------------------------~~~~---------~~~~-~~~~~~~L~~~~l~~~~~~~~~~ 542 (692)
...++.+++ .... ..+. ...+..+|..+||. .++++.
T Consensus 79 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgl~---~~~~~~ 155 (635)
T PRK11147 79 VEGTVYDFVAEGIEEQAEYLKRYHDISHLVETDPSEKNLNELAKLQEQLDHHNLWQLENRINEVLAQLGLD---PDAALS 155 (635)
T ss_pred CCCCHHHHHHHhhHHHHHHHHHHHHHHHHhccCchHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHhCCCC---CCCchh
Confidence 112222221 1000 0111 23577889999995 378999
Q ss_pred CCCHHHHHHHHHHHHhccCCcEEEEeCCCCCCCHHHHHHHHHHHHhcCceEEEEecCHHHHHhhccEEEEEECCEEEEec
Q 005532 543 LLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEYKGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYA 622 (692)
Q Consensus 543 ~LSgGqkqrv~LAral~~~p~lLlLDEPTn~LD~~~~~~l~~~l~~~~~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~ 622 (692)
+|||||||||+|||+|+.+|+||||||||||||+.+++||.++|.++++|||+||||++++..+||+|++|++|+++.|.
T Consensus 156 ~LSgGekqRv~LAraL~~~P~lLLLDEPt~~LD~~~~~~L~~~L~~~~~tvlivsHd~~~l~~~~d~i~~L~~G~i~~~~ 235 (635)
T PRK11147 156 SLSGGWLRKAALGRALVSNPDVLLLDEPTNHLDIETIEWLEGFLKTFQGSIIFISHDRSFIRNMATRIVDLDRGKLVSYP 235 (635)
T ss_pred hcCHHHHHHHHHHHHHhcCCCEEEEcCCCCccCHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhcCeEEEEECCEEEEec
Confidence 99999999999999999999999999999999999999999999999899999999999999999999999999999999
Q ss_pred CChhHHHHHhHHHHHH
Q 005532 623 GDYNYYLEKNLDAREK 638 (692)
Q Consensus 623 g~~~~~~~~~~~~~~~ 638 (692)
|+|+.|..+++++.+.
T Consensus 236 g~~~~~~~~~~~~~~~ 251 (635)
T PRK11147 236 GNYDQYLLEKEEALRV 251 (635)
T ss_pred CCHHHHHHHHHHHHHH
Confidence 9999999887765433
No 121
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=1.7e-41 Score=347.92 Aligned_cols=205 Identities=23% Similarity=0.387 Sum_probs=172.3
Q ss_pred cEEEEeEEEEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC---------ceEEEEc
Q 005532 97 GVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN---------MKIAFLS 167 (692)
Q Consensus 97 ~l~i~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~---------~~i~~v~ 167 (692)
+|+++|++++|+++++|+++||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.. ..++|++
T Consensus 1 ~l~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~i~~~~~~~~~~i~~~~ 80 (236)
T TIGR03864 1 ALEVAGLSFAYGARRALDDVSFTVRPGEFVALLGPNGAGKSTLFSLLTRLYVAQEGQISVAGHDLRRAPRAALARLGVVF 80 (236)
T ss_pred CEEEEeeEEEECCEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcccCChhhhhhEEEeC
Confidence 3789999999998889999999999999999999999999999999999999999999998743 2599999
Q ss_pred ccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHHhhhcC
Q 005532 168 QEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELG 247 (692)
Q Consensus 168 Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lg 247 (692)
|++.+++..|+.+|+..... .. ..........+.++++.+|
T Consensus 81 q~~~~~~~~t~~~~l~~~~~---------------~~------------------------~~~~~~~~~~~~~~l~~~g 121 (236)
T TIGR03864 81 QQPTLDLDLSVRQNLRYHAA---------------LH------------------------GLSRAEARERIAALLARLG 121 (236)
T ss_pred CCCCCcccCcHHHHHHHHHH---------------hc------------------------CCCHHHHHHHHHHHHHHcC
Confidence 99888788899999742110 00 0001112335567788889
Q ss_pred CCccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc----CCCeEEEEecCHHHHHhhc
Q 005532 248 FTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVIISHDRAFLDQLC 323 (692)
Q Consensus 248 l~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~----~~~tvI~vsHd~~~l~~~~ 323 (692)
+. ...++++.+||||||||++|||||+.+|+||||||||++||+.+++++.++|++ .+.|||+|||+++++.. |
T Consensus 122 l~-~~~~~~~~~LS~G~~qrl~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~-~ 199 (236)
T TIGR03864 122 LA-ERADDKVRELNGGHRRRVEIARALLHRPALLLLDEPTVGLDPASRAAIVAHVRALCRDQGLSVLWATHLVDEIEA-D 199 (236)
T ss_pred Ch-hhhcCChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecChhhHhh-C
Confidence 86 467888999999999999999999999999999999999999999999887743 47899999999999975 9
Q ss_pred CeEEEEecceEEEeccChHH
Q 005532 324 TKIVETEMGVSRTYEGNYSQ 343 (692)
Q Consensus 324 d~i~~l~~G~~~~~~G~y~~ 343 (692)
|+|+++++|++. ..|..++
T Consensus 200 d~i~~l~~G~i~-~~~~~~~ 218 (236)
T TIGR03864 200 DRLVVLHRGRVL-ADGAAAE 218 (236)
T ss_pred CEEEEEeCCeEE-EeCCHHH
Confidence 999999999984 5566543
No 122
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=100.00 E-value=1.3e-41 Score=345.33 Aligned_cols=196 Identities=24% Similarity=0.442 Sum_probs=166.1
Q ss_pred EEEEeEEEEeCC----eeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC-------------
Q 005532 98 VKLENISKSYKG----VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN------------- 160 (692)
Q Consensus 98 l~i~~ls~~y~~----~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~------------- 160 (692)
|+++|++++|++ +++|+++||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.+
T Consensus 2 l~~~~v~~~~~~~~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (221)
T TIGR02211 2 LKCENLGKRYQEGKLDTRVLKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDNPTSGEVLFNGQSLSKLSSNERAKLR 81 (221)
T ss_pred EEEEeeeEEccCCCcceEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcCHhHHHHHH
Confidence 789999999974 469999999999999999999999999999999999999999999998632
Q ss_pred -ceEEEEcccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHH
Q 005532 161 -MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKV 239 (692)
Q Consensus 161 -~~i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 239 (692)
..|+|++|++.+++..|++||+..... +. ..+......++
T Consensus 82 ~~~i~~v~q~~~~~~~~tv~~~l~~~~~---------------~~------------------------~~~~~~~~~~~ 122 (221)
T TIGR02211 82 NKKLGFIYQFHHLLPDFTALENVAMPLL---------------IG------------------------KKSVKEAKERA 122 (221)
T ss_pred HhcEEEEecccccCCCCcHHHHHHHHHH---------------hc------------------------CCCHHHHHHHH
Confidence 359999999888778899999853110 00 00011123455
Q ss_pred HHHhhhcCCCccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc----CCCeEEEEecC
Q 005532 240 SKLMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVIISHD 315 (692)
Q Consensus 240 ~~ll~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~----~~~tvI~vsHd 315 (692)
.++++.+|+. ...++++.+|||||||||+|||||+.+|+||||||||++||+.++..+.+.|++ .+.|||+||||
T Consensus 123 ~~~l~~~~l~-~~~~~~~~~LS~G~~qrv~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~ 201 (221)
T TIGR02211 123 YEMLEKVGLE-HRINHRPSELSGGERQRVAIARALVNQPSLVLADEPTGNLDNNNAKIIFDLMLELNRELNTSFLVVTHD 201 (221)
T ss_pred HHHHHHcCCh-hhhhCChhhCCHHHHHHHHHHHHHhCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCC
Confidence 6788888996 567888999999999999999999999999999999999999999999887752 47899999999
Q ss_pred HHHHHhhcCeEEEEecceE
Q 005532 316 RAFLDQLCTKIVETEMGVS 334 (692)
Q Consensus 316 ~~~l~~~~d~i~~l~~G~~ 334 (692)
++++.. ||+|+++++|++
T Consensus 202 ~~~~~~-~d~v~~l~~G~i 219 (221)
T TIGR02211 202 LELAKK-LDRVLEMKDGQL 219 (221)
T ss_pred HHHHhh-cCEEEEEeCCEe
Confidence 999965 799999999975
No 123
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.1e-41 Score=350.44 Aligned_cols=213 Identities=26% Similarity=0.430 Sum_probs=174.2
Q ss_pred EEEEeEEEEeCC-eeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC-------------ceE
Q 005532 98 VKLENISKSYKG-VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN-------------MKI 163 (692)
Q Consensus 98 l~i~~ls~~y~~-~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~-------------~~i 163 (692)
|+++|++++|++ +++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.+ ..+
T Consensus 1 l~~~~l~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~i 80 (241)
T cd03256 1 IEVENLSKTYPNGKKALKDVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVEPTSGSVLIDGTDINKLKGKALRQLRRQI 80 (241)
T ss_pred CEEeeEEEecCCccEEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEeccccCHhHHHHHHhcc
Confidence 468999999987 789999999999999999999999999999999999999999999998732 249
Q ss_pred EEEcccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHHh
Q 005532 164 AFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLM 243 (692)
Q Consensus 164 ~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll 243 (692)
+|++|++.+++..||.+|+.......... . ..+. .........++.+++
T Consensus 81 ~~~~q~~~~~~~~tv~~~l~~~~~~~~~~------~-~~~~------------------------~~~~~~~~~~~~~~l 129 (241)
T cd03256 81 GMIFQQFNLIERLSVLENVLSGRLGRRST------W-RSLF------------------------GLFPKEEKQRALAAL 129 (241)
T ss_pred EEEcccCcccccCcHHHHHHhhhcccchh------h-hhhc------------------------ccCcHHHHHHHHHHH
Confidence 99999998878889999985321100000 0 0000 000011234566788
Q ss_pred hhcCCCccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc----CCCeEEEEecCHHHH
Q 005532 244 PELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVIISHDRAFL 319 (692)
Q Consensus 244 ~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~----~~~tvI~vsHd~~~l 319 (692)
+.+|+. ...++++.+|||||||||+|||||+.+|+||||||||++||+.+++++.+.|++ .++|||+||||++++
T Consensus 130 ~~~~l~-~~~~~~~~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~~~ 208 (241)
T cd03256 130 ERVGLL-DKAYQRADQLSGGQQQRVAIARALMQQPKLILADEPVASLDPASSRQVMDLLKRINREEGITVIVSLHQVDLA 208 (241)
T ss_pred HHcCCh-hhhCCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHH
Confidence 888986 567888999999999999999999999999999999999999999999887753 489999999999999
Q ss_pred HhhcCeEEEEecceEEEeccChHH
Q 005532 320 DQLCTKIVETEMGVSRTYEGNYSQ 343 (692)
Q Consensus 320 ~~~~d~i~~l~~G~~~~~~G~y~~ 343 (692)
..+||+|+++++|++. +.|.+.+
T Consensus 209 ~~~~d~v~~l~~G~i~-~~~~~~~ 231 (241)
T cd03256 209 REYADRIVGLKDGRIV-FDGPPAE 231 (241)
T ss_pred HHhCCEEEEEECCEEE-eecCHHH
Confidence 9999999999999974 5576544
No 124
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-41 Score=350.19 Aligned_cols=208 Identities=26% Similarity=0.432 Sum_probs=175.1
Q ss_pred cEEEEeEEEEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC-----------ceEEE
Q 005532 97 GVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN-----------MKIAF 165 (692)
Q Consensus 97 ~l~i~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~-----------~~i~~ 165 (692)
+|+++|++++|+++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.. ..|+|
T Consensus 3 ~l~~~~l~~~~~~~~~l~~~sl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~i~~ 82 (241)
T PRK10895 3 TLTAKNLAKAYKGRRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNIIIDDEDISLLPLHARARRGIGY 82 (241)
T ss_pred eEEEeCcEEEeCCEEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHHhCeEE
Confidence 5999999999998889999999999999999999999999999999999999999999998732 35999
Q ss_pred EcccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHHhhh
Q 005532 166 LSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPE 245 (692)
Q Consensus 166 v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~ 245 (692)
++|++.+++..|+.||+..... +.. ..+......++.++++.
T Consensus 83 ~~q~~~~~~~~tv~enl~~~~~---------------~~~-----------------------~~~~~~~~~~~~~~l~~ 124 (241)
T PRK10895 83 LPQEASIFRRLSVYDNLMAVLQ---------------IRD-----------------------DLSAEQREDRANELMEE 124 (241)
T ss_pred eccCCcccccCcHHHHHhhhhh---------------ccc-----------------------ccCHHHHHHHHHHHHHH
Confidence 9999988778899999853210 000 00011123456677888
Q ss_pred cCCCccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHc---cCCCeEEEEecCHHHHHhh
Q 005532 246 LGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG---KQDVPMVIISHDRAFLDQL 322 (692)
Q Consensus 246 lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~---~~~~tvI~vsHd~~~l~~~ 322 (692)
+|+. ...++++.+|||||+|||+|||||+.+|++|||||||++||+.+++++.++|+ +.+.|||++||+++++..+
T Consensus 125 ~~l~-~~~~~~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~~~~~~ 203 (241)
T PRK10895 125 FHIE-HLRDSMGQSLSGGERRRVEIARALAANPKFILLDEPFAGVDPISVIDIKRIIEHLRDSGLGVLITDHNVRETLAV 203 (241)
T ss_pred cCCH-HHhhcchhhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHh
Confidence 8886 45688899999999999999999999999999999999999999998877664 4689999999999999999
Q ss_pred cCeEEEEecceEEEeccChHHH
Q 005532 323 CTKIVETEMGVSRTYEGNYSQY 344 (692)
Q Consensus 323 ~d~i~~l~~G~~~~~~G~y~~~ 344 (692)
||+|+++++|++. +.|.+.++
T Consensus 204 ~d~v~~l~~G~i~-~~~~~~~~ 224 (241)
T PRK10895 204 CERAYIVSQGHLI-AHGTPTEI 224 (241)
T ss_pred cCEEEEEeCCeEE-eeCCHHHH
Confidence 9999999999974 56776544
No 125
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-41 Score=358.02 Aligned_cols=208 Identities=24% Similarity=0.418 Sum_probs=173.9
Q ss_pred cEEEEeEEEEeCC-----eeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC-----------
Q 005532 97 GVKLENISKSYKG-----VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN----------- 160 (692)
Q Consensus 97 ~l~i~~ls~~y~~-----~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~----------- 160 (692)
.|+++|++|.|++ +++|+||||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|..
T Consensus 2 ~l~~~~l~~~y~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 81 (287)
T PRK13637 2 SIKIENLTHIYMEGTPFEKKALDNVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLKPTSGKIIIDGVDITDKKVKLSDI 81 (287)
T ss_pred EEEEEEEEEECCCCCccccceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCccEEEECCEECCCcCccHHHH
Confidence 4899999999975 469999999999999999999999999999999999999999999998732
Q ss_pred -ceEEEEcccCc-cCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHH
Q 005532 161 -MKIAFLSQEFE-VSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAK 238 (692)
Q Consensus 161 -~~i~~v~Q~~~-~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (692)
..|||++|+|. .++..||.+|+...... ..+.......+
T Consensus 82 ~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~---------------------------------------~~~~~~~~~~~ 122 (287)
T PRK13637 82 RKKVGLVFQYPEYQLFEETIEKDIAFGPIN---------------------------------------LGLSEEEIENR 122 (287)
T ss_pred hhceEEEecCchhccccccHHHHHHhHHHH---------------------------------------CCCCHHHHHHH
Confidence 25899999974 23467999998521100 00112233456
Q ss_pred HHHHhhhcCCCc-cccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc----CCCeEEEEe
Q 005532 239 VSKLMPELGFTA-DDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVIIS 313 (692)
Q Consensus 239 i~~ll~~lgl~~-~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~----~~~tvI~vs 313 (692)
+.++++.+|+.. ...++++.+||||||||++|||||+.+|+||||||||++||+.++.++.++|++ .+.|||+||
T Consensus 123 ~~~~l~~~gL~~~~~~~~~~~~LSgGq~qrv~iAraL~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvi~vt 202 (287)
T PRK13637 123 VKRAMNIVGLDYEDYKDKSPFELSGGQKRRVAIAGVVAMEPKILILDEPTAGLDPKGRDEILNKIKELHKEYNMTIILVS 202 (287)
T ss_pred HHHHHHHcCCCchhhccCCcccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEe
Confidence 778899999962 467899999999999999999999999999999999999999999999887742 489999999
Q ss_pred cCHHHHHhhcCeEEEEecceEEEeccChHHH
Q 005532 314 HDRAFLDQLCTKIVETEMGVSRTYEGNYSQY 344 (692)
Q Consensus 314 Hd~~~l~~~~d~i~~l~~G~~~~~~G~y~~~ 344 (692)
||++++..+||+|+++++|++. ..|...++
T Consensus 203 Hd~~~~~~~~drv~~l~~G~i~-~~g~~~~~ 232 (287)
T PRK13637 203 HSMEDVAKLADRIIVMNKGKCE-LQGTPREV 232 (287)
T ss_pred CCHHHHHHhCCEEEEEECCEEE-EECCHHHH
Confidence 9999999999999999999984 56765544
No 126
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.7e-41 Score=347.78 Aligned_cols=201 Identities=30% Similarity=0.414 Sum_probs=173.0
Q ss_pred EEEEeEEEEcCCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccce-------------ee
Q 005532 425 VTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL-------------PN 491 (692)
Q Consensus 425 l~~~~l~~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~~-------------~~ 491 (692)
|+++|+++.|+++.+|+++||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++. .+
T Consensus 1 l~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~~~i~ 80 (235)
T cd03261 1 IELRGLTKSFGGRTVLKGVDLDVRRGEILAIIGPSGSGKSTLLRLIVGLLRPDSGEVLIDGEDISGLSEAELYRLRRRMG 80 (235)
T ss_pred CeEEEEEEEECCEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccChhhHHHHhcceE
Confidence 47899999999888999999999999999999999999999999999999999999999886531 34
Q ss_pred eecccchhhcCCCccHHHHHHHHhcc---cc----HHHHHHHHhhcCCCcccccccCCCCCHHHHHHHHHHHHhccCCcE
Q 005532 492 YFEQNQAEALDLDKTVLETVAEAAED---WR----IDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTL 564 (692)
Q Consensus 492 ~~~q~~~~~l~~~~tv~e~~~~~~~~---~~----~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~LAral~~~p~l 564 (692)
|++|. ..+.+..|+.+|+...... .. ...+..+++.+++. ...++++.+|||||||||+|||||+.+|+|
T Consensus 81 ~v~q~--~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LSgG~~qrv~ia~al~~~p~l 157 (235)
T cd03261 81 MLFQS--GALFDSLTVFENVAFPLREHTRLSEEEIREIVLEKLEAVGLR-GAEDLYPAELSGGMKKRVALARALALDPEL 157 (235)
T ss_pred EEccC--cccCCCCcHHHHHHHHHhhccCCCHHHHHHHHHHHHHHcCCc-hhhcCChhhCCHHHHHHHHHHHHHhcCCCE
Confidence 56654 3456678999998754211 11 23467889999995 567899999999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEECCEEEEecCChhHHH
Q 005532 565 LVLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYYL 629 (692)
Q Consensus 565 LlLDEPTn~LD~~~~~~l~~~l~~~----~~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~~~~ 629 (692)
|||||||++||+.+++.+.+.|+++ +.|||+||||++++..+||+|++|++|++. +.|+.+++.
T Consensus 158 lllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsH~~~~~~~~~d~v~~l~~G~i~-~~g~~~~~~ 225 (235)
T cd03261 158 LLYDEPTAGLDPIASGVIDDLIRSLKKELGLTSIMVTHDLDTAFAIADRIAVLYDGKIV-AEGTPEELR 225 (235)
T ss_pred EEecCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhcCEEEEEECCeEE-EecCHHHHc
Confidence 9999999999999999999999864 469999999999999999999999999997 457766553
No 127
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-41 Score=357.49 Aligned_cols=209 Identities=22% Similarity=0.294 Sum_probs=174.1
Q ss_pred cEEEEeEEEEeCCe-----eceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC-----------
Q 005532 97 GVKLENISKSYKGV-----TVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN----------- 160 (692)
Q Consensus 97 ~l~i~~ls~~y~~~-----~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~----------- 160 (692)
+|+++|++|+|+.. ++|+|+||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|..
T Consensus 1 mi~~~~v~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~ 80 (288)
T PRK13643 1 MIKFEKVNYTYQPNSPFASRALFDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQPTEGKVTVGDIVVSSTSKQKEIK 80 (288)
T ss_pred CEEEEEEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCCCCCcEEEECCEECccccccccHH
Confidence 38899999999742 59999999999999999999999999999999999999999999998743
Q ss_pred ---ceEEEEcccCc-cCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHH
Q 005532 161 ---MKIAFLSQEFE-VSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLD 236 (692)
Q Consensus 161 ---~~i~~v~Q~~~-~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (692)
..|+|++|+|. .++..||.+|+...... ...+.....
T Consensus 81 ~~~~~ig~v~q~~~~~l~~~tv~~~l~~~~~~---------------------------------------~~~~~~~~~ 121 (288)
T PRK13643 81 PVRKKVGVVFQFPESQLFEETVLKDVAFGPQN---------------------------------------FGIPKEKAE 121 (288)
T ss_pred HHHhhEEEEecCcchhcccchHHHHHHhHHHH---------------------------------------cCCCHHHHH
Confidence 14899999972 23456999998522100 001112234
Q ss_pred HHHHHHhhhcCCCccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHc---cCCCeEEEEe
Q 005532 237 AKVSKLMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG---KQDVPMVIIS 313 (692)
Q Consensus 237 ~~i~~ll~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~---~~~~tvI~vs 313 (692)
.++.++++.+|+.+...++++.+|||||||||+|||||+.+|+||||||||++||+.++.++.++|+ +.+.|||+||
T Consensus 122 ~~~~~~l~~~~L~~~~~~~~~~~LSgGqkqrvaiA~aL~~~p~illLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~vt 201 (288)
T PRK13643 122 KIAAEKLEMVGLADEFWEKSPFELSGGQMRRVAIAGILAMEPEVLVLDEPTAGLDPKARIEMMQLFESIHQSGQTVVLVT 201 (288)
T ss_pred HHHHHHHHHcCCChhhccCCcccCCHHHHHHHHHHHHHHhCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEe
Confidence 5677888889986456789999999999999999999999999999999999999999999988764 3589999999
Q ss_pred cCHHHHHhhcCeEEEEecceEEEeccChHHHH
Q 005532 314 HDRAFLDQLCTKIVETEMGVSRTYEGNYSQYV 345 (692)
Q Consensus 314 Hd~~~l~~~~d~i~~l~~G~~~~~~G~y~~~~ 345 (692)
||++++..+||+|++|++|++ .+.|...++.
T Consensus 202 Hd~~~~~~~~dri~~l~~G~i-~~~g~~~~~~ 232 (288)
T PRK13643 202 HLMDDVADYADYVYLLEKGHI-ISCGTPSDVF 232 (288)
T ss_pred cCHHHHHHhCCEEEEEECCEE-EEECCHHHHH
Confidence 999999999999999999998 4678765543
No 128
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=9.5e-42 Score=345.10 Aligned_cols=192 Identities=27% Similarity=0.425 Sum_probs=166.9
Q ss_pred eEEEEeEEEEcCC--eecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccce------------
Q 005532 424 VVTIKNLEFGYED--RLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL------------ 489 (692)
Q Consensus 424 ~l~~~~l~~~y~~--~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~~------------ 489 (692)
+|+++|+++.|++ +++|+++||+|++|+++||+||||||||||+++|+|+++|++|+|.++|.++.
T Consensus 1 ~l~~~~l~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 80 (216)
T TIGR00960 1 MIRFEQVSKAYPGGHQPALDNLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEKPTRGKIRFNGQDLTRLRGREIPFLRR 80 (216)
T ss_pred CeEEEEEEEEecCCCeeEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEehhhcChhHHHHHHH
Confidence 4889999999964 47999999999999999999999999999999999999999999999986541
Q ss_pred -eeeecccchhhcCCCccHHHHHHHHhcc------ccHHHHHHHHhhcCCCcccccccCCCCCHHHHHHHHHHHHhccCC
Q 005532 490 -PNYFEQNQAEALDLDKTVLETVAEAAED------WRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPS 562 (692)
Q Consensus 490 -~~~~~q~~~~~l~~~~tv~e~~~~~~~~------~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~LAral~~~p 562 (692)
.+|++|+ ..+.+..|+.+|+...... .....+.++++.+++. +..++++.+|||||||||+|||||+.+|
T Consensus 81 ~i~~~~q~--~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LSgG~~qrv~laral~~~p 157 (216)
T TIGR00960 81 HIGMVFQD--HRLLSDRTVYDNVAFPLRIIGVPPRDANERVSAALEKVGLE-GKAHALPMQLSGGEQQRVAIARAIVHKP 157 (216)
T ss_pred hceEEecC--ccccccccHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCh-hhhhCChhhCCHHHHHHHHHHHHHhcCC
Confidence 3466664 3456678999998754211 1124578899999995 5678899999999999999999999999
Q ss_pred cEEEEeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhccEEEEEECCEE
Q 005532 563 TLLVLDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKGSNL 618 (692)
Q Consensus 563 ~lLlLDEPTn~LD~~~~~~l~~~l~~~---~~tviivSHd~~~l~~~~d~i~~l~~g~l 618 (692)
+||||||||++||+.+++.+.+.|.++ +.|||+||||++++..+||+|++|++|++
T Consensus 158 ~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i 216 (216)
T TIGR00960 158 PLLLADEPTGNLDPELSRDIMRLFEEFNRRGTTVLVATHDINLVETYRHRTLTLSRGRL 216 (216)
T ss_pred CEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 999999999999999999999999876 46999999999999999999999999864
No 129
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.5e-42 Score=348.00 Aligned_cols=202 Identities=28% Similarity=0.412 Sum_probs=177.6
Q ss_pred eEEEEeEEEEcCCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCc---cc--------eeee
Q 005532 424 VVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEH---NV--------LPNY 492 (692)
Q Consensus 424 ~l~~~~l~~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~---~~--------~~~~ 492 (692)
+|+++++++.|+...+++|||++|+.||.+||.|||||||||||++|+|++.|++|.|.++|. +. .+++
T Consensus 2 ~i~i~~~~~~~~~~~a~~di~l~i~~Ge~vaLlGpSGaGKsTlLRiIAGLe~p~~G~I~~~~~~l~D~~~~~~~~R~VGf 81 (345)
T COG1118 2 SIRINNVKKRFGAFGALDDISLDIKSGELVALLGPSGAGKSTLLRIIAGLETPDAGRIRLNGRVLFDVSNLAVRDRKVGF 81 (345)
T ss_pred ceeehhhhhhcccccccccceeeecCCcEEEEECCCCCcHHHHHHHHhCcCCCCCceEEECCEeccchhccchhhcceeE
Confidence 488999999999999999999999999999999999999999999999999999999999987 33 3567
Q ss_pred ecccchhhcCCCccHHHHHHHHhcc--------ccHHHHHHHHhhcCCCcccccccCCCCCHHHHHHHHHHHHhccCCcE
Q 005532 493 FEQNQAEALDLDKTVLETVAEAAED--------WRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTL 564 (692)
Q Consensus 493 ~~q~~~~~l~~~~tv~e~~~~~~~~--------~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~LAral~~~p~l 564 (692)
+.|+ +.+++.+||.+||.++... ....++.++|+.+.+. ...+++|.+|||||||||+|||||+..|++
T Consensus 82 vFQ~--YALF~HmtVa~NIAFGl~~~~~~p~~~~~r~rv~elL~lvqL~-~la~ryP~QLSGGQrQRVALARALA~eP~v 158 (345)
T COG1118 82 VFQH--YALFPHMTVADNIAFGLKVRKERPSEAEIRARVEELLRLVQLE-GLADRYPAQLSGGQRQRVALARALAVEPKV 158 (345)
T ss_pred EEec--hhhcccchHHhhhhhcccccccCCChhhHHHHHHHHHHHhccc-chhhcCchhcChHHHHHHHHHHHhhcCCCe
Confidence 7776 4588999999999987521 1124578889999994 788999999999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHh----cCceEEEEecCHHHHHhhccEEEEEECCEEEEecCChhHH
Q 005532 565 LVLDEPTNHLDIPSKEMLEEAISE----YKGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYY 628 (692)
Q Consensus 565 LlLDEPTn~LD~~~~~~l~~~l~~----~~~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~~~ 628 (692)
||||||+++||..-+..|..+|++ ++.|+|+||||.+++.++||||++|++|+|....-+.+-|
T Consensus 159 LLLDEPf~ALDa~vr~~lr~wLr~~~~~~~~ttvfVTHD~eea~~ladrvvvl~~G~Ieqvg~p~ev~ 226 (345)
T COG1118 159 LLLDEPFGALDAKVRKELRRWLRKLHDRLGVTTVFVTHDQEEALELADRVVVLNQGRIEQVGPPDEVY 226 (345)
T ss_pred EeecCCchhhhHHHHHHHHHHHHHHHHhhCceEEEEeCCHHHHHhhcceEEEecCCeeeeeCCHHHHh
Confidence 999999999999998877777664 5779999999999999999999999999998764444444
No 130
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.7e-42 Score=332.15 Aligned_cols=205 Identities=20% Similarity=0.303 Sum_probs=163.6
Q ss_pred CCcEEEEeEEEEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCc-----cEEEECCCC---------
Q 005532 95 SSGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDS-----GNVIKAKSN--------- 160 (692)
Q Consensus 95 ~~~l~i~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~-----G~I~~~~~~--------- 160 (692)
.+.++++|+++.|+++.+|+|||+.|++++++|||||+||||||||++|..+..... |+|.++|.+
T Consensus 5 ~~~~~~~~l~~yYg~~~aL~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~g~ni~~~~~d~~ 84 (253)
T COG1117 5 IPAIEVRDLNLYYGDKHALKDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLDGKNIYDPKVDVV 84 (253)
T ss_pred cceeEecceeEEECchhhhccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEECCeeccCCCCCHH
Confidence 346999999999999999999999999999999999999999999999999887654 999998754
Q ss_pred ---ceEEEEcccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHH
Q 005532 161 ---MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDA 237 (692)
Q Consensus 161 ---~~i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (692)
.+||+|+|.|..++ +||+||+..+..- .-.. + ..+++
T Consensus 85 ~lRr~vGMVFQkPnPFp-~SIydNVayG~r~--~g~~------------------------------------~-~~lde 124 (253)
T COG1117 85 ELRRRVGMVFQKPNPFP-MSIYDNVAYGLRL--HGIK------------------------------------D-KELDE 124 (253)
T ss_pred HHHHHheeeccCCCCCC-chHHHHHHHhHHh--hccc------------------------------------h-HHHHH
Confidence 26999999998866 9999999744321 0000 0 01111
Q ss_pred HHHHHhhhcCCC---ccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc--CCCeEEEE
Q 005532 238 KVSKLMPELGFT---ADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVII 312 (692)
Q Consensus 238 ~i~~ll~~lgl~---~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~--~~~tvI~v 312 (692)
.+++.|+...|. .+.+++....||||||||++|||||+.+|+|||||||||+|||.+...+++++.+ ...|||+|
T Consensus 125 iVe~sLk~AaLWdEVKDrL~~sa~~LSGGQQQRLcIARalAv~PeVlLmDEPtSALDPIsT~kIEeLi~eLk~~yTIviV 204 (253)
T COG1117 125 IVESSLKKAALWDEVKDRLHKSALGLSGGQQQRLCIARALAVKPEVLLMDEPTSALDPISTLKIEELITELKKKYTIVIV 204 (253)
T ss_pred HHHHHHHHhHhHHHhHHHhhCCccCCChhHHHHHHHHHHHhcCCcEEEecCcccccCchhHHHHHHHHHHHHhccEEEEE
Confidence 222222222221 1345566788999999999999999999999999999999999997777766543 57899999
Q ss_pred ecCHHHHHhhcCeEEEEecceEEEecc
Q 005532 313 SHDRAFLDQLCTKIVETEMGVSRTYEG 339 (692)
Q Consensus 313 sHd~~~l~~~~d~i~~l~~G~~~~~~G 339 (692)
||.+.-+.+++|+++.+..|.+..|.-
T Consensus 205 THnmqQAaRvSD~taFf~~G~LvE~g~ 231 (253)
T COG1117 205 THNMQQAARVSDYTAFFYLGELVEFGP 231 (253)
T ss_pred eCCHHHHHHHhHhhhhhcccEEEEEcC
Confidence 999999999999999999999977643
No 131
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.2e-41 Score=346.48 Aligned_cols=199 Identities=24% Similarity=0.453 Sum_probs=168.4
Q ss_pred CcEEEEeEEEEeCC----eeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC-----------
Q 005532 96 SGVKLENISKSYKG----VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN----------- 160 (692)
Q Consensus 96 ~~l~i~~ls~~y~~----~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~----------- 160 (692)
++|+++|++|.|++ .++|+++||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.+
T Consensus 4 ~~l~~~~l~~~~~~~~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~ 83 (233)
T PRK11629 4 ILLQCDNLCKRYQEGSVQTDVLHNVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTSGDVIFNGQPMSKLSSAAKAE 83 (233)
T ss_pred ceEEEEeEEEEcCCCCcceeeEEeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCHHHHHH
Confidence 35999999999974 479999999999999999999999999999999999999999999998732
Q ss_pred ---ceEEEEcccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHH
Q 005532 161 ---MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDA 237 (692)
Q Consensus 161 ---~~i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (692)
..|+|++|++.+++..|+++|+..... +. .........
T Consensus 84 ~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~---------------~~------------------------~~~~~~~~~ 124 (233)
T PRK11629 84 LRNQKLGFIYQFHHLLPDFTALENVAMPLL---------------IG------------------------KKKPAEINS 124 (233)
T ss_pred HHhccEEEEecCcccCCCCCHHHHHHHHHH---------------hc------------------------CCCHHHHHH
Confidence 359999999988778899999853210 00 001112234
Q ss_pred HHHHHhhhcCCCccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc----CCCeEEEEe
Q 005532 238 KVSKLMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVIIS 313 (692)
Q Consensus 238 ~i~~ll~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~----~~~tvI~vs 313 (692)
++.++++.+|+. +..++++.+|||||||||+|||||+.+|+||||||||++||+.+++++.++|++ .|+|||+||
T Consensus 125 ~~~~~l~~~gl~-~~~~~~~~~LSgG~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~s 203 (233)
T PRK11629 125 RALEMLAAVGLE-HRANHRPSELSGGERQRVAIARALVNNPRLVLADEPTGNLDARNADSIFQLLGELNRLQGTAFLVVT 203 (233)
T ss_pred HHHHHHHHcCCc-hhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEe
Confidence 567788889996 466888999999999999999999999999999999999999999999887753 478999999
Q ss_pred cCHHHHHhhcCeEEEEecceEE
Q 005532 314 HDRAFLDQLCTKIVETEMGVSR 335 (692)
Q Consensus 314 Hd~~~l~~~~d~i~~l~~G~~~ 335 (692)
||++++..+ ++++++++|++.
T Consensus 204 H~~~~~~~~-~~~~~l~~G~i~ 224 (233)
T PRK11629 204 HDLQLAKRM-SRQLEMRDGRLT 224 (233)
T ss_pred CCHHHHHhh-CEEEEEECCEEE
Confidence 999999875 699999999873
No 132
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.4e-41 Score=343.16 Aligned_cols=193 Identities=33% Similarity=0.489 Sum_probs=168.9
Q ss_pred EEEEeEEEEcCCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccce--------eeeeccc
Q 005532 425 VTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL--------PNYFEQN 496 (692)
Q Consensus 425 l~~~~l~~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~~--------~~~~~q~ 496 (692)
|+++|+++.|+++++|+++||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.++. .+|++|+
T Consensus 1 l~~~~l~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~i~~v~q~ 80 (213)
T cd03259 1 LELKGLSKTYGSVRALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLERPDSGEILIDGRDVTGVPPERRNIGMVFQD 80 (213)
T ss_pred CeeeeeEEEeCCeeeecceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcCcCchhhccEEEEcCc
Confidence 47899999998888999999999999999999999999999999999999999999999886542 3566665
Q ss_pred chhhcCCCccHHHHHHHHhcc------ccHHHHHHHHhhcCCCcccccccCCCCCHHHHHHHHHHHHhccCCcEEEEeCC
Q 005532 497 QAEALDLDKTVLETVAEAAED------WRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEP 570 (692)
Q Consensus 497 ~~~~l~~~~tv~e~~~~~~~~------~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~LAral~~~p~lLlLDEP 570 (692)
. .+.+..|+.+|+...... .....+.++++.+++. ...++++.+|||||||||+|||||+.+|++||||||
T Consensus 81 ~--~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LSgG~~qrl~la~al~~~p~~lllDEP 157 (213)
T cd03259 81 Y--ALFPHLTVAENIAFGLKLRGVPKAEIRARVRELLELVGLE-GLLNRYPHELSGGQQQRVALARALAREPSLLLLDEP 157 (213)
T ss_pred h--hhccCCcHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCCh-hhhhcChhhCCHHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 3 455678999998754221 1123577899999995 567889999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEECCEEEE
Q 005532 571 TNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQD 620 (692)
Q Consensus 571 Tn~LD~~~~~~l~~~l~~~----~~tviivSHd~~~l~~~~d~i~~l~~g~l~~ 620 (692)
|++||+.++.++.+.|.++ +.|||+||||++++.++||+|++|++|++..
T Consensus 158 t~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~G~i~~ 211 (213)
T cd03259 158 LSALDAKLREELREELKELQRELGITTIYVTHDQEEALALADRIAVMNEGRIVQ 211 (213)
T ss_pred cccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhcCEEEEEECCEEEe
Confidence 9999999999999999864 4599999999999999999999999999874
No 133
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.5e-42 Score=334.66 Aligned_cols=202 Identities=29% Similarity=0.419 Sum_probs=178.4
Q ss_pred ceEEEEeEEEEc-CCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccce------------
Q 005532 423 SVVTIKNLEFGY-EDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL------------ 489 (692)
Q Consensus 423 ~~l~~~~l~~~y-~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~~------------ 489 (692)
.+|+++||++.| +++.+|++|||+|++||+|+|||++|||||||||+|.|+.+|++|+|.++|.++.
T Consensus 2 ~~i~~~nl~k~yp~~~~aL~~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d~t~G~i~~~g~~i~~~~~k~lr~~r~ 81 (258)
T COG3638 2 MMIEVKNLSKTYPGGHQALKDVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVDPTSGEILFNGVQITKLKGKELRKLRR 81 (258)
T ss_pred ceEEEeeeeeecCCCceeeeeEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccCCCcceEEecccchhccchHHHHHHHH
Confidence 479999999999 6788999999999999999999999999999999999999999999999986652
Q ss_pred -eeeecccchhhcCCCccHHHHHHHHhc-----------ccc---HHHHHHHHhhcCCCcccccccCCCCCHHHHHHHHH
Q 005532 490 -PNYFEQNQAEALDLDKTVLETVAEAAE-----------DWR---IDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAF 554 (692)
Q Consensus 490 -~~~~~q~~~~~l~~~~tv~e~~~~~~~-----------~~~---~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~L 554 (692)
.++++|. +++.+..+|++|++...- .+. ...+...|+++|+. +...++.++|||||||||+|
T Consensus 82 ~iGmIfQ~--~nLv~r~sv~~NVl~grl~~~s~~~slfglfsk~dk~~Al~aLervgi~-~~A~qra~~LSGGQQQRVaI 158 (258)
T COG3638 82 DIGMIFQQ--FNLVPRLSVLENVLLGRLGYTSTWRSLFGLFSKEDKAQALDALERVGIL-DKAYQRASTLSGGQQQRVAI 158 (258)
T ss_pred hceeEecc--CCcccccHHHHHHHhhhcccchHHHHHhCCCCHHHHHHHHHHHHHcCcH-HHHHHHhccCCcchhHHHHH
Confidence 3566654 578899999999986531 111 23477899999995 67888999999999999999
Q ss_pred HHHhccCCcEEEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEECCEEEEecCChhHH
Q 005532 555 CKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYY 628 (692)
Q Consensus 555 Aral~~~p~lLlLDEPTn~LD~~~~~~l~~~l~~~----~~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~~~ 628 (692)
||||+++|+|+|.|||+++|||.+.+.+++.|++. +.|||+..|+++++.++||||+-|++|+++ |.|+-++.
T Consensus 159 ARaL~Q~pkiILADEPvasLDp~~a~~Vm~~l~~in~~~g~Tvi~nLH~vdlA~~Y~~Riigl~~G~iv-fDg~~~el 235 (258)
T COG3638 159 ARALVQQPKIILADEPVASLDPESAKKVMDILKDINQEDGITVIVNLHQVDLAKKYADRIIGLKAGRIV-FDGPASEL 235 (258)
T ss_pred HHHHhcCCCEEecCCcccccChhhHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHHhhheEecCCcEE-EeCChhhh
Confidence 99999999999999999999999999999998754 569999999999999999999999999998 78887663
No 134
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-41 Score=355.33 Aligned_cols=205 Identities=26% Similarity=0.388 Sum_probs=173.2
Q ss_pred cEEEEeEEEEeC-CeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC----------ceEEE
Q 005532 97 GVKLENISKSYK-GVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN----------MKIAF 165 (692)
Q Consensus 97 ~l~i~~ls~~y~-~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~----------~~i~~ 165 (692)
+|+++|++|.|+ +.++|+|+||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|.. ..|+|
T Consensus 4 ~l~~~~l~~~~~~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~~ 83 (274)
T PRK13647 4 IIEVEDLHFRYKDGTKALKGLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYLPQRGRVKVMGREVNAENEKWVRSKVGL 83 (274)
T ss_pred eEEEEEEEEEeCCCCeeeeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCceEEEECCEECCCCCHHHHHhhEEE
Confidence 699999999996 4679999999999999999999999999999999999999999999998742 25999
Q ss_pred EcccCc-cCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHHhh
Q 005532 166 LSQEFE-VSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMP 244 (692)
Q Consensus 166 v~Q~~~-~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~ 244 (692)
++|+|. .++..||.+|+...... ...+......++.++++
T Consensus 84 v~q~~~~~~~~~tv~e~l~~~~~~---------------------------------------~~~~~~~~~~~~~~~l~ 124 (274)
T PRK13647 84 VFQDPDDQVFSSTVWDDVAFGPVN---------------------------------------MGLDKDEVERRVEEALK 124 (274)
T ss_pred EecChhhhhccCcHHHHHHhhHHH---------------------------------------cCCCHHHHHHHHHHHHH
Confidence 999973 34567999998522100 00111123345677888
Q ss_pred hcCCCccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc---CCCeEEEEecCHHHHHh
Q 005532 245 ELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK---QDVPMVIISHDRAFLDQ 321 (692)
Q Consensus 245 ~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~---~~~tvI~vsHd~~~l~~ 321 (692)
.+|+. ...++++.+|||||||||+|||||+.+|++|||||||++||+.++.++.++|++ .+.|||+||||++++.+
T Consensus 125 ~~~L~-~~~~~~~~~LSgG~~qrv~laraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tili~tH~~~~~~~ 203 (274)
T PRK13647 125 AVRMW-DFRDKPPYHLSYGQKKRVAIAGVLAMDPDVIVLDEPMAYLDPRGQETLMEILDRLHNQGKTVIVATHDVDLAAE 203 (274)
T ss_pred HCCCH-HHhcCChhhCCHHHHHHHHHHHHHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence 89996 567899999999999999999999999999999999999999999999887743 48999999999999999
Q ss_pred hcCeEEEEecceEEEeccChH
Q 005532 322 LCTKIVETEMGVSRTYEGNYS 342 (692)
Q Consensus 322 ~~d~i~~l~~G~~~~~~G~y~ 342 (692)
+||+|+++++|++. +.|...
T Consensus 204 ~~d~i~~l~~G~i~-~~g~~~ 223 (274)
T PRK13647 204 WADQVIVLKEGRVL-AEGDKS 223 (274)
T ss_pred hCCEEEEEECCEEE-EECCHH
Confidence 99999999999984 556653
No 135
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=100.00 E-value=2.3e-41 Score=345.10 Aligned_cols=199 Identities=27% Similarity=0.406 Sum_probs=168.6
Q ss_pred CcEEEEeEEEEeCC----eeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC-----------
Q 005532 96 SGVKLENISKSYKG----VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN----------- 160 (692)
Q Consensus 96 ~~l~i~~ls~~y~~----~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~----------- 160 (692)
++|+++|++++|++ .++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|..
T Consensus 5 ~~l~~~~l~~~~~~~~~~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 84 (228)
T PRK10584 5 NIVEVHHLKKSVGQGEHELSILTGVELVVKRGETIALIGESGSGKSTLLAILAGLDDGSSGEVSLVGQPLHQMDEEARAK 84 (228)
T ss_pred ceEEEeeeEEEccCCCcceEEEeccEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCCeeEEECCEEcccCCHHHHHH
Confidence 46999999999975 359999999999999999999999999999999999999999999998632
Q ss_pred ---ceEEEEcccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHH
Q 005532 161 ---MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDA 237 (692)
Q Consensus 161 ---~~i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (692)
..|+|++|++.+++..|+.+|+..... .. ........+
T Consensus 85 ~~~~~i~~~~q~~~l~~~~tv~~~l~~~~~---------------~~------------------------~~~~~~~~~ 125 (228)
T PRK10584 85 LRAKHVGFVFQSFMLIPTLNALENVELPAL---------------LR------------------------GESSRQSRN 125 (228)
T ss_pred HHhheEEEEEcccccCCCcCHHHHHHHHHH---------------hc------------------------CCCHHHHHH
Confidence 259999999988778899999853110 00 000112234
Q ss_pred HHHHHhhhcCCCccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHc----cCCCeEEEEe
Q 005532 238 KVSKLMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG----KQDVPMVIIS 313 (692)
Q Consensus 238 ~i~~ll~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~----~~~~tvI~vs 313 (692)
++.++++.+|+. +..++++.+||||||||++|||||+.+|+||||||||+|||+.+++++.++|+ +.+.|||+||
T Consensus 126 ~~~~~l~~~~l~-~~~~~~~~~LS~Ge~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~s 204 (228)
T PRK10584 126 GAKALLEQLGLG-KRLDHLPAQLSGGEQQRVALARAFNGRPDVLFADEPTGNLDRQTGDKIADLLFSLNREHGTTLILVT 204 (228)
T ss_pred HHHHHHHHcCCH-hHhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEe
Confidence 567788889986 56688899999999999999999999999999999999999999999988874 3488999999
Q ss_pred cCHHHHHhhcCeEEEEecceEE
Q 005532 314 HDRAFLDQLCTKIVETEMGVSR 335 (692)
Q Consensus 314 Hd~~~l~~~~d~i~~l~~G~~~ 335 (692)
||++++.. ||+++++++|++.
T Consensus 205 H~~~~~~~-~d~i~~l~~g~i~ 225 (228)
T PRK10584 205 HDLQLAAR-CDRRLRLVNGQLQ 225 (228)
T ss_pred cCHHHHHh-CCEEEEEECCEEE
Confidence 99999865 9999999999873
No 136
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.4e-41 Score=356.68 Aligned_cols=208 Identities=22% Similarity=0.320 Sum_probs=173.2
Q ss_pred cEEEEeEEEEeCC-----eeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC-----------
Q 005532 97 GVKLENISKSYKG-----VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN----------- 160 (692)
Q Consensus 97 ~l~i~~ls~~y~~-----~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~----------- 160 (692)
.|+++|++++|++ +++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|..
T Consensus 2 ~i~~~~l~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~iiG~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 81 (287)
T PRK13641 2 SIKFENVDYIYSPGTPMEKKGLDNISFELEEGSFVALVGHTGSGKSTLMQHFNALLKPSSGTITIAGYHITPETGNKNLK 81 (287)
T ss_pred EEEEEEEEEEcCCCCCccccceeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHH
Confidence 4899999999974 469999999999999999999999999999999999999999999998742
Q ss_pred ---ceEEEEcccCc-cCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHH
Q 005532 161 ---MKIAFLSQEFE-VSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLD 236 (692)
Q Consensus 161 ---~~i~~v~Q~~~-~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (692)
..|+|++|++. .++..||.+|+...... . ........
T Consensus 82 ~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~---------------~------------------------~~~~~~~~ 122 (287)
T PRK13641 82 KLRKKVSLVFQFPEAQLFENTVLKDVEFGPKN---------------F------------------------GFSEDEAK 122 (287)
T ss_pred HHHhceEEEEeChhhhhccchHHHHHHHHHHH---------------c------------------------CCCHHHHH
Confidence 25999999973 23457999998521100 0 01111233
Q ss_pred HHHHHHhhhcCCCccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHc---cCCCeEEEEe
Q 005532 237 AKVSKLMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG---KQDVPMVIIS 313 (692)
Q Consensus 237 ~~i~~ll~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~---~~~~tvI~vs 313 (692)
.++.++++.+|+.....++++.+|||||||||+|||||+.+|++|||||||++||+.++.++.++|+ +.+.|||+||
T Consensus 123 ~~~~~~l~~~gL~~~~~~~~~~~LSgGq~qrl~laral~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~~g~tvlivs 202 (287)
T PRK13641 123 EKALKWLKKVGLSEDLISKSPFELSGGQMRRVAIAGVMAYEPEILCLDEPAAGLDPEGRKEMMQLFKDYQKAGHTVILVT 202 (287)
T ss_pred HHHHHHHHHcCCChhHhhCCcccCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEe
Confidence 4567888899996456789999999999999999999999999999999999999999999988775 3588999999
Q ss_pred cCHHHHHhhcCeEEEEecceEEEeccChHHH
Q 005532 314 HDRAFLDQLCTKIVETEMGVSRTYEGNYSQY 344 (692)
Q Consensus 314 Hd~~~l~~~~d~i~~l~~G~~~~~~G~y~~~ 344 (692)
||++++..+||+|+++++|++ .+.|...++
T Consensus 203 H~~~~~~~~~d~v~~l~~G~i-~~~g~~~~~ 232 (287)
T PRK13641 203 HNMDDVAEYADDVLVLEHGKL-IKHASPKEI 232 (287)
T ss_pred CCHHHHHHhCCEEEEEECCEE-EEeCCHHHH
Confidence 999999999999999999997 456665443
No 137
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=3.1e-41 Score=358.42 Aligned_cols=205 Identities=28% Similarity=0.428 Sum_probs=179.5
Q ss_pred CceEEEEeEEEEcCCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccce---------eee
Q 005532 422 RSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL---------PNY 492 (692)
Q Consensus 422 ~~~l~~~~l~~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~~---------~~~ 492 (692)
..+|+++||+++|++..+|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++. .+|
T Consensus 5 ~~~i~i~~l~k~~~~~~~l~~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~p~~G~v~i~G~~~~~~~~~~~~~ig~ 84 (306)
T PRK13537 5 VAPIDFRNVEKRYGDKLVVDGLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTHPDAGSISLCGEPVPSRARHARQRVGV 84 (306)
T ss_pred CceEEEEeEEEEECCeEEEecceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEecccchHHHHhcEEE
Confidence 35799999999999889999999999999999999999999999999999999999999999987642 467
Q ss_pred ecccchhhcCCCccHHHHHHHHhccc--c----HHHHHHHHhhcCCCcccccccCCCCCHHHHHHHHHHHHhccCCcEEE
Q 005532 493 FEQNQAEALDLDKTVLETVAEAAEDW--R----IDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLV 566 (692)
Q Consensus 493 ~~q~~~~~l~~~~tv~e~~~~~~~~~--~----~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~LAral~~~p~lLl 566 (692)
++|. ..+++..|+.+|+......+ . ...+.++++.+++. ...++++..|||||||||+||+||+.+|++||
T Consensus 85 v~q~--~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LS~G~~qrl~la~aL~~~P~lll 161 (306)
T PRK13537 85 VPQF--DNLDPDFTVRENLLVFGRYFGLSAAAARALVPPLLEFAKLE-NKADAKVGELSGGMKRRLTLARALVNDPDVLV 161 (306)
T ss_pred Eecc--CcCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCc-hHhcCchhhCCHHHHHHHHHHHHHhCCCCEEE
Confidence 7765 35667899999987543211 1 13466889999995 56789999999999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhccEEEEEECCEEEEecCChhHHHH
Q 005532 567 LDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYYLE 630 (692)
Q Consensus 567 LDEPTn~LD~~~~~~l~~~l~~~---~~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~~~~~ 630 (692)
|||||+|||+.++..+.+.|+++ +.|||++||+++++.++||||++|++|++. +.|+.+++..
T Consensus 162 LDEPt~gLD~~~~~~l~~~l~~l~~~g~till~sH~l~e~~~~~d~i~il~~G~i~-~~g~~~~l~~ 227 (306)
T PRK13537 162 LDEPTTGLDPQARHLMWERLRSLLARGKTILLTTHFMEEAERLCDRLCVIEEGRKI-AEGAPHALIE 227 (306)
T ss_pred EeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEE-EECCHHHHHh
Confidence 99999999999999999999876 459999999999999999999999999997 4688777654
No 138
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.4e-41 Score=344.52 Aligned_cols=205 Identities=35% Similarity=0.506 Sum_probs=180.2
Q ss_pred ceEEEEeEEEEcCCe-ecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccce-----------e
Q 005532 423 SVVTIKNLEFGYEDR-LLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL-----------P 490 (692)
Q Consensus 423 ~~l~~~~l~~~y~~~-~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~~-----------~ 490 (692)
++++++++++.|++. .+|+++||+|++|++++|+|+||||||||+++|+|+++|++|.|.++|.++. .
T Consensus 2 ~~i~~~~l~~~y~~~~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~p~~G~v~~~g~~~~~~~~~~~~~~~v 81 (235)
T COG1122 2 RMIEAENLSFRYPGRKAALKDVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLKPTSGEVLVDGLDTSSEKSLLELRQKV 81 (235)
T ss_pred ceEEEEEEEEEcCCCceeeeeeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCcCCCCEEEECCeeccchhhHHHhhcce
Confidence 468999999999875 8999999999999999999999999999999999999999999999987643 5
Q ss_pred eeecccchhhcCCCccHHHHHHHHhccc------cHHHHHHHHhhcCCCcccccccCCCCCHHHHHHHHHHHHhccCCcE
Q 005532 491 NYFEQNQAEALDLDKTVLETVAEAAEDW------RIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTL 564 (692)
Q Consensus 491 ~~~~q~~~~~l~~~~tv~e~~~~~~~~~------~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~LAral~~~p~l 564 (692)
+++.|+++..+ ...||.+++.+..... ....+.++|..+|+. +..++++.+|||||||||+||.+|+.+|++
T Consensus 82 G~VfQnpd~q~-~~~tV~~evafg~~n~g~~~~e~~~rv~~~l~~vgl~-~~~~r~p~~LSGGqkqRvaIA~vLa~~P~i 159 (235)
T COG1122 82 GLVFQNPDDQL-FGPTVEDEVAFGLENLGLPREEIEERVAEALELVGLE-ELLDRPPFNLSGGQKQRVAIAGVLAMGPEI 159 (235)
T ss_pred EEEEECccccc-ccCcHHHHHhhchhhcCCCHHHHHHHHHHHHHHcCch-hhccCCccccCCcceeeHHhhHHHHcCCCE
Confidence 78899876555 6789999998764321 124578899999995 568999999999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEECCEEEEecCChhHHHH
Q 005532 565 LVLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYYLE 630 (692)
Q Consensus 565 LlLDEPTn~LD~~~~~~l~~~l~~~----~~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~~~~~ 630 (692)
|||||||++||+.+++.+.+.++++ +.|||+||||++++..+|||+++|++|++. +.|...++..
T Consensus 160 liLDEPta~LD~~~~~~l~~~l~~L~~~~~~tii~~tHd~~~~~~~ad~v~vl~~G~i~-~~g~p~~i~~ 228 (235)
T COG1122 160 LLLDEPTAGLDPKGRRELLELLKKLKEEGGKTIIIVTHDLELVLEYADRVVVLDDGKIL-ADGDPAEIFN 228 (235)
T ss_pred EEEcCCCCCCCHHHHHHHHHHHHHHHhcCCCeEEEEeCcHHHHHhhCCEEEEEECCEEe-ecCCHHHHhh
Confidence 9999999999999999999999876 349999999999999999999999999997 4676444433
No 139
>TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc.
Probab=100.00 E-value=1.4e-41 Score=360.94 Aligned_cols=198 Identities=29% Similarity=0.457 Sum_probs=168.5
Q ss_pred EEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC---------ceEEEEcccCccCCC
Q 005532 105 KSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN---------MKIAFLSQEFEVSMS 175 (692)
Q Consensus 105 ~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~---------~~i~~v~Q~~~~~~~ 175 (692)
|+|+++++|+|+||+|++|+++||+||||||||||+++|+|+++|++|+|.++|.+ ..|||++|++.+++.
T Consensus 1 k~y~~~~~l~~vs~~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~ 80 (302)
T TIGR01188 1 KVYGDFKAVDGVNFKVREGEVFGFLGPNGAGKTTTIRMLTTLLRPTSGTARVAGYDVVREPRKVRRSIGIVPQYASVDED 80 (302)
T ss_pred CeeCCeeEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccCHHHHHhhcEEecCCCCCCCC
Confidence 46888889999999999999999999999999999999999999999999998743 259999999988888
Q ss_pred CCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHHhhhcCCCcccccc
Q 005532 176 RTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFTADDGDR 255 (692)
Q Consensus 176 ~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl~~~~~~~ 255 (692)
.||+||+..... +. .........++.++++.+|+. ...++
T Consensus 81 ~tv~e~l~~~~~---------------~~------------------------~~~~~~~~~~~~~~l~~~~l~-~~~~~ 120 (302)
T TIGR01188 81 LTGRENLEMMGR---------------LY------------------------GLPKDEAEERAEELLELFELG-EAADR 120 (302)
T ss_pred CcHHHHHHHHHH---------------Hc------------------------CCCHHHHHHHHHHHHHHcCCh-hHhCC
Confidence 999999852100 00 001112234677889999996 56789
Q ss_pred ccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHc---cCCCeEEEEecCHHHHHhhcCeEEEEecc
Q 005532 256 LVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG---KQDVPMVIISHDRAFLDQLCTKIVETEMG 332 (692)
Q Consensus 256 ~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~---~~~~tvI~vsHd~~~l~~~~d~i~~l~~G 332 (692)
++.+|||||||||+|||||+.+|++|||||||+|||+.+++++.++|+ +.|.|||++||+++++..+||+|+++++|
T Consensus 121 ~~~~LSgG~~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvi~~sH~~~~~~~~~d~v~~l~~G 200 (302)
T TIGR01188 121 PVGTYSGGMRRRLDIAASLIHQPDVLFLDEPTTGLDPRTRRAIWDYIRALKEEGVTILLTTHYMEEADKLCDRIAIIDHG 200 (302)
T ss_pred chhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECC
Confidence 999999999999999999999999999999999999999999988775 35899999999999999999999999999
Q ss_pred eEEEeccChHH
Q 005532 333 VSRTYEGNYSQ 343 (692)
Q Consensus 333 ~~~~~~G~y~~ 343 (692)
++. +.|...+
T Consensus 201 ~i~-~~g~~~~ 210 (302)
T TIGR01188 201 RII-AEGTPEE 210 (302)
T ss_pred EEE-EECCHHH
Confidence 984 5676543
No 140
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.4e-41 Score=356.44 Aligned_cols=208 Identities=24% Similarity=0.381 Sum_probs=173.0
Q ss_pred cEEEEeEEEEeCC-----eeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC-----------
Q 005532 97 GVKLENISKSYKG-----VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN----------- 160 (692)
Q Consensus 97 ~l~i~~ls~~y~~-----~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~----------- 160 (692)
.|+++|++|+|++ +++|+||||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|..
T Consensus 2 ~l~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~i~~~~~~~~~~ 81 (286)
T PRK13646 2 TIRFDNVSYTYQKGTPYEHQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLKPTTGTVTVDDITITHKTKDKYIR 81 (286)
T ss_pred EEEEEEEEEEECCCCccccCceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHH
Confidence 3899999999964 369999999999999999999999999999999999999999999998732
Q ss_pred ---ceEEEEcccCc-cCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHH
Q 005532 161 ---MKIAFLSQEFE-VSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLD 236 (692)
Q Consensus 161 ---~~i~~v~Q~~~-~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (692)
..||||+|+|. .++..||.+|+...... ...+.....
T Consensus 82 ~~~~~ig~v~q~~~~~l~~~tv~e~i~~~~~~---------------------------------------~~~~~~~~~ 122 (286)
T PRK13646 82 PVRKRIGMVFQFPESQLFEDTVEREIIFGPKN---------------------------------------FKMNLDEVK 122 (286)
T ss_pred HHHhheEEEecChHhccchhhHHHHHHhhHHH---------------------------------------cCCCHHHHH
Confidence 25899999973 23445999998522100 001111233
Q ss_pred HHHHHHhhhcCCCccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc----CCCeEEEE
Q 005532 237 AKVSKLMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVII 312 (692)
Q Consensus 237 ~~i~~ll~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~----~~~tvI~v 312 (692)
.++.++++.+|+.....++++.+|||||||||+|||||+.+|+||||||||++||+.++.++.++|++ .|.|||+|
T Consensus 123 ~~~~~~l~~~gL~~~~~~~~~~~LSgGq~qrv~laraL~~~p~illlDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvl~v 202 (286)
T PRK13646 123 NYAHRLLMDLGFSRDVMSQSPFQMSGGQMRKIAIVSILAMNPDIIVLDEPTAGLDPQSKRQVMRLLKSLQTDENKTIILV 202 (286)
T ss_pred HHHHHHHHHcCCChhhhhCCcccCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhCCCEEEEE
Confidence 45677888999964567888999999999999999999999999999999999999999999887753 48999999
Q ss_pred ecCHHHHHhhcCeEEEEecceEEEeccChHHH
Q 005532 313 SHDRAFLDQLCTKIVETEMGVSRTYEGNYSQY 344 (692)
Q Consensus 313 sHd~~~l~~~~d~i~~l~~G~~~~~~G~y~~~ 344 (692)
|||++++..+||+|+++++|++. +.|...++
T Consensus 203 tH~~~~~~~~~dri~~l~~G~i~-~~g~~~~~ 233 (286)
T PRK13646 203 SHDMNEVARYADEVIVMKEGSIV-SQTSPKEL 233 (286)
T ss_pred ecCHHHHHHhCCEEEEEECCEEE-EECCHHHH
Confidence 99999999999999999999984 56776544
No 141
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.
Probab=100.00 E-value=2e-41 Score=345.37 Aligned_cols=202 Identities=26% Similarity=0.415 Sum_probs=165.8
Q ss_pred cEEEEeEEEEeCCe----eceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC------------
Q 005532 97 GVKLENISKSYKGV----TVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN------------ 160 (692)
Q Consensus 97 ~l~i~~ls~~y~~~----~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~------------ 160 (692)
+|+++|++++|++. ++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|..
T Consensus 1 ~l~~~~v~~~~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 80 (228)
T cd03257 1 LLEVKNLSVSFPTGGGSVKALDDVSFSIKKGETLGLVGESGSGKSTLARAILGLLKPTSGSIIFDGKDLLKLSRRLRKIR 80 (228)
T ss_pred CeEEEeeeEeccCCCcceeeecCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccchhhHHHh
Confidence 37899999999865 79999999999999999999999999999999999999999999998732
Q ss_pred -ceEEEEcccC--ccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHH
Q 005532 161 -MKIAFLSQEF--EVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDA 237 (692)
Q Consensus 161 -~~i~~v~Q~~--~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (692)
..++|++|++ .+.+..||++|+...... ... .. .......
T Consensus 81 ~~~i~~~~q~~~~~~~~~~tv~~nl~~~~~~---------------~~~-~~---------------------~~~~~~~ 123 (228)
T cd03257 81 RKEIQMVFQDPMSSLNPRMTIGEQIAEPLRI---------------HGK-LS---------------------KKEARKE 123 (228)
T ss_pred hccEEEEecCchhhcCCcCCHHHHHHHHHHh---------------ccC-Cc---------------------HHHHHHH
Confidence 2599999998 355678999998532100 000 00 0000011
Q ss_pred HHHHHhhhcCCCccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc----CCCeEEEEe
Q 005532 238 KVSKLMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVIIS 313 (692)
Q Consensus 238 ~i~~ll~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~----~~~tvI~vs 313 (692)
.+.++++.+|+.....++++.+|||||||||+|||||+.+|+||||||||++||+.+++++.+.|++ .+.|||+||
T Consensus 124 ~~~~~l~~~~l~~~~~~~~~~~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~s 203 (228)
T cd03257 124 AVLLLLVGVGLPEEVLNRYPHELSGGQRQRVAIARALALNPKLLIADEPTSALDVSVQAQILDLLKKLQEELGLTLLFIT 203 (228)
T ss_pred HHHHHHHHCCCChhHhhCCchhcCHHHHHHHHHHHHHhcCCCEEEecCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEe
Confidence 1235677788853467888999999999999999999999999999999999999999999888753 378999999
Q ss_pred cCHHHHHhhcCeEEEEecceEE
Q 005532 314 HDRAFLDQLCTKIVETEMGVSR 335 (692)
Q Consensus 314 Hd~~~l~~~~d~i~~l~~G~~~ 335 (692)
||++++..+||+|+++++|++.
T Consensus 204 H~~~~~~~~~d~i~~l~~G~i~ 225 (228)
T cd03257 204 HDLGVVAKIADRVAVMYAGKIV 225 (228)
T ss_pred CCHHHHHHhcCeEEEEeCCEEE
Confidence 9999999999999999999874
No 142
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.9e-41 Score=359.23 Aligned_cols=211 Identities=17% Similarity=0.256 Sum_probs=174.3
Q ss_pred CCCcEEEEeEEEEeCC-----eeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC--------
Q 005532 94 ISSGVKLENISKSYKG-----VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN-------- 160 (692)
Q Consensus 94 ~~~~l~i~~ls~~y~~-----~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~-------- 160 (692)
..+.|+++|++|+|++ .++|+|+||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|..
T Consensus 18 ~~~~l~~~nl~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~p~~G~I~i~g~~~~~~~~~~ 97 (320)
T PRK13631 18 DDIILRVKNLYCVFDEKQENELVALNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIKSKYGTIQVGDIYIGDKKNNH 97 (320)
T ss_pred CCceEEEEeEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCEEcccccccc
Confidence 3457999999999974 359999999999999999999999999999999999999999999997521
Q ss_pred ------------------ceEEEEcccCc-cCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHH
Q 005532 161 ------------------MKIAFLSQEFE-VSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFD 221 (692)
Q Consensus 161 ------------------~~i~~v~Q~~~-~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 221 (692)
..|+||+|+|. .++..||.+|+...... .
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~eni~~~~~~--------------~------------------ 145 (320)
T PRK13631 98 ELITNPYSKKIKNFKELRRRVSMVFQFPEYQLFKDTIEKDIMFGPVA--------------L------------------ 145 (320)
T ss_pred cccccccccccchHHHHHhcEEEEEECchhccccchHHHHHHhhHHh--------------c------------------
Confidence 24899999983 23456999998532100 0
Q ss_pred HHHHHHhhcCcccHHHHHHHHhhhcCCCccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHH
Q 005532 222 LLQRKAQAVNLDTLDAKVSKLMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGY 301 (692)
Q Consensus 222 ~~~~~~~~~~~~~~~~~i~~ll~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~ 301 (692)
..+......++.++++.+|+.....++.+.+|||||||||+|||||+.+|+||||||||++||+.++.++.+.
T Consensus 146 -------~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~~LSgGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~~ 218 (320)
T PRK13631 146 -------GVKKSEAKKLAKFYLNKMGLDDSYLERSPFGLSGGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQL 218 (320)
T ss_pred -------CCCHHHHHHHHHHHHHHcCCChhHhcCCcccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHH
Confidence 0011122345667888899964567888999999999999999999999999999999999999999999887
Q ss_pred Hc---cCCCeEEEEecCHHHHHhhcCeEEEEecceEEEeccChHHH
Q 005532 302 LG---KQDVPMVIISHDRAFLDQLCTKIVETEMGVSRTYEGNYSQY 344 (692)
Q Consensus 302 L~---~~~~tvI~vsHd~~~l~~~~d~i~~l~~G~~~~~~G~y~~~ 344 (692)
|+ +.+.|||+||||++++..+||+|++|++|++. ..|...++
T Consensus 219 L~~l~~~g~TiiivtHd~~~~~~~adri~vl~~G~i~-~~g~~~~~ 263 (320)
T PRK13631 219 ILDAKANNKTVFVITHTMEHVLEVADEVIVMDKGKIL-KTGTPYEI 263 (320)
T ss_pred HHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEE-EeCCHHHH
Confidence 74 35899999999999999999999999999984 56765544
No 143
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=100.00 E-value=9e-42 Score=344.52 Aligned_cols=199 Identities=31% Similarity=0.483 Sum_probs=165.4
Q ss_pred EEeEEEEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC-----ceEEEEcccCccC-
Q 005532 100 LENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN-----MKIAFLSQEFEVS- 173 (692)
Q Consensus 100 i~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~-----~~i~~v~Q~~~~~- 173 (692)
++|++++|+++++|+++||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.+ ..|+|++|++.+.
T Consensus 2 ~~~l~~~~~~~~~l~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~i~~v~q~~~~~~ 81 (213)
T cd03235 2 VEDLTVSYGGHPVLEDVSFEVKPGEFLAIVGPNGAGKSTLLKAILGLLKPTSGSIRVFGKPLEKERKRIGYVPQRRSIDR 81 (213)
T ss_pred cccceeEECCEEeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCccHHHHHhheEEecccccccc
Confidence 6899999988889999999999999999999999999999999999999999999998753 3699999998653
Q ss_pred -CCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHHhhhcCCCccc
Q 005532 174 -MSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFTADD 252 (692)
Q Consensus 174 -~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl~~~~ 252 (692)
+..||.||+........ ... .........++.++++.+|+. ..
T Consensus 82 ~~~~tv~e~l~~~~~~~~-----------~~~------------------------~~~~~~~~~~~~~~l~~~~l~-~~ 125 (213)
T cd03235 82 DFPISVRDVVLMGLYGHK-----------GLF------------------------RRLSKADKAKVDEALERVGLS-EL 125 (213)
T ss_pred CCCCcHHHHHHhcccccc-----------ccc------------------------cCCCHHHHHHHHHHHHHcCCH-HH
Confidence 34799999853211000 000 000011234566788888986 56
Q ss_pred cccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc---CCCeEEEEecCHHHHHhhcCeEEEE
Q 005532 253 GDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK---QDVPMVIISHDRAFLDQLCTKIVET 329 (692)
Q Consensus 253 ~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~---~~~tvI~vsHd~~~l~~~~d~i~~l 329 (692)
.++++.+|||||||||+|||||+.+|++|||||||++||+.+++++.++|++ .+.|||+||||++++..+||+|+++
T Consensus 126 ~~~~~~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l 205 (213)
T cd03235 126 ADRQIGELSGGQQQRVLLARALVQDPDLLLLDEPFAGVDPKTQEDIYELLRELRREGMTILVVTHDLGLVLEYFDRVLLL 205 (213)
T ss_pred HhCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEE
Confidence 7888999999999999999999999999999999999999999999887753 5789999999999999999999999
Q ss_pred ecceE
Q 005532 330 EMGVS 334 (692)
Q Consensus 330 ~~G~~ 334 (692)
++|.+
T Consensus 206 ~~~~~ 210 (213)
T cd03235 206 NRTVV 210 (213)
T ss_pred cCcEe
Confidence 88743
No 144
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3e-41 Score=347.18 Aligned_cols=201 Identities=23% Similarity=0.357 Sum_probs=170.3
Q ss_pred CcEEEEeEEEEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC----------ceEEE
Q 005532 96 SGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN----------MKIAF 165 (692)
Q Consensus 96 ~~l~i~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~----------~~i~~ 165 (692)
+.|+++|++++|+++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.+ ..++|
T Consensus 2 ~~l~~~~l~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~i~~ 81 (241)
T PRK14250 2 NEIEFKEVSYSSFGKEILKDISVKFEGGAIYTIVGPSGAGKSTLIKLINRLIDPTEGSILIDGVDIKTIDVIDLRRKIGM 81 (241)
T ss_pred ceEEEEeEEEEeCCeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcChHHhhhcEEE
Confidence 35899999999988889999999999999999999999999999999999999999999998742 25999
Q ss_pred EcccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHHhhh
Q 005532 166 LSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPE 245 (692)
Q Consensus 166 v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~ 245 (692)
++|++.++. .|+.+|+...... . + ....++.++++.
T Consensus 82 ~~q~~~~~~-~tv~e~l~~~~~~---------------~--------------------------~--~~~~~~~~~l~~ 117 (241)
T PRK14250 82 VFQQPHLFE-GTVKDNIEYGPML---------------K--------------------------G--EKNVDVEYYLSI 117 (241)
T ss_pred EecCchhch-hhHHHHHhcchhh---------------c--------------------------C--cHHHHHHHHHHH
Confidence 999987754 6999987421000 0 0 012345567788
Q ss_pred cCCCccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc----CCCeEEEEecCHHHHHh
Q 005532 246 LGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVIISHDRAFLDQ 321 (692)
Q Consensus 246 lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~----~~~tvI~vsHd~~~l~~ 321 (692)
+|+.....++++.+|||||||||+|||||+.+|++|||||||++||+.+++++.+.|++ .+.|||+||||++++..
T Consensus 118 ~~l~~~~~~~~~~~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tii~~sH~~~~~~~ 197 (241)
T PRK14250 118 VGLNKEYATRDVKNLSGGEAQRVSIARTLANNPEVLLLDEPTSALDPTSTEIIEELIVKLKNKMNLTVIWITHNMEQAKR 197 (241)
T ss_pred cCCCHHHhhCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHHHHHH
Confidence 88864466888999999999999999999999999999999999999999999887753 48999999999999999
Q ss_pred hcCeEEEEecceEEEeccCh
Q 005532 322 LCTKIVETEMGVSRTYEGNY 341 (692)
Q Consensus 322 ~~d~i~~l~~G~~~~~~G~y 341 (692)
+||+|+++++|++. ..|..
T Consensus 198 ~~d~i~~l~~G~i~-~~~~~ 216 (241)
T PRK14250 198 IGDYTAFLNKGILV-EYAKT 216 (241)
T ss_pred hCCEEEEEeCCEEE-EeCCH
Confidence 99999999999985 34443
No 145
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=4.2e-41 Score=346.32 Aligned_cols=215 Identities=29% Similarity=0.426 Sum_probs=176.9
Q ss_pred cEEEEeEEEEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC-----------ceEEE
Q 005532 97 GVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN-----------MKIAF 165 (692)
Q Consensus 97 ~l~i~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~-----------~~i~~ 165 (692)
+|+++|+++.|+++++|+|+||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|.. ..++|
T Consensus 2 ~i~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~i~~ 81 (242)
T TIGR03411 2 ILYLEGLSVSFDGFKALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTRPDEGSVLFGGTDLTGLPEHQIARAGIGR 81 (242)
T ss_pred eEEEEeeEEEcCCeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCeecCCCCHHHHHhcCeeE
Confidence 4899999999998889999999999999999999999999999999999999999999998742 24999
Q ss_pred EcccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHHhhh
Q 005532 166 LSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPE 245 (692)
Q Consensus 166 v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~ 245 (692)
++|++.+++..||.+|+........ .+...+. .........++.++++.
T Consensus 82 ~~q~~~~~~~~tv~~nl~~~~~~~~-------~~~~~~~------------------------~~~~~~~~~~~~~~l~~ 130 (242)
T TIGR03411 82 KFQKPTVFENLTVFENLELALPRDK-------SVFASLF------------------------FRLSAEEKDRIEEVLET 130 (242)
T ss_pred eccccccCCCCCHHHHHHHhhhccc-------ccccccc------------------------cccHHHHHHHHHHHHHH
Confidence 9999988888899999853211000 0000000 00001123456778888
Q ss_pred cCCCccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc--CCCeEEEEecCHHHHHhhc
Q 005532 246 LGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVIISHDRAFLDQLC 323 (692)
Q Consensus 246 lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~--~~~tvI~vsHd~~~l~~~~ 323 (692)
+|+. ...++++.+|||||+|||+|||||+.+|++|||||||++||+.++.++.++|++ .+.|||+|||+++++..+|
T Consensus 131 ~~l~-~~~~~~~~~LS~Ge~qrv~laral~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~ 209 (242)
T TIGR03411 131 IGLA-DEADRLAGLLSHGQKQWLEIGMLLMQDPKLLLLDEPVAGMTDEETEKTAELLKSLAGKHSVVVVEHDMEFVRSIA 209 (242)
T ss_pred cCCc-hhhcCChhhCCHHHHHHHHHHHHHhcCCCEEEecCCccCCCHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhC
Confidence 8986 567888999999999999999999999999999999999999999999888754 3689999999999999999
Q ss_pred CeEEEEecceEEEeccChHHH
Q 005532 324 TKIVETEMGVSRTYEGNYSQY 344 (692)
Q Consensus 324 d~i~~l~~G~~~~~~G~y~~~ 344 (692)
|+|+++++|++. +.|...++
T Consensus 210 d~i~~l~~g~~~-~~~~~~~~ 229 (242)
T TIGR03411 210 DKVTVLHQGSVL-AEGSLDQV 229 (242)
T ss_pred CEEEEEECCeEE-eeCCHHHH
Confidence 999999999974 56766544
No 146
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=2.8e-41 Score=343.01 Aligned_cols=201 Identities=25% Similarity=0.397 Sum_probs=166.6
Q ss_pred EEEEeEEEEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC-----------ceEEEE
Q 005532 98 VKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN-----------MKIAFL 166 (692)
Q Consensus 98 l~i~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~-----------~~i~~v 166 (692)
|+++|++++|++.++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.. ..|+|+
T Consensus 1 l~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i~~~ 80 (222)
T cd03224 1 LEVENLNAGYGKSQILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLPPRSGSIRFDGRDITGLPPHERARAGIGYV 80 (222)
T ss_pred CEEeeEEeecCCeeEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCCCCHHHHHhcCeEEe
Confidence 468999999998889999999999999999999999999999999999999999999998732 249999
Q ss_pred cccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHHhhhc
Q 005532 167 SQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPEL 246 (692)
Q Consensus 167 ~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~l 246 (692)
+|++.+++..|+++|+....... . ......++.++++.+
T Consensus 81 ~q~~~~~~~~t~~~~l~~~~~~~-~----------------------------------------~~~~~~~~~~~l~~~ 119 (222)
T cd03224 81 PEGRRIFPELTVEENLLLGAYAR-R----------------------------------------RAKRKARLERVYELF 119 (222)
T ss_pred ccccccCCCCcHHHHHHHHhhhc-C----------------------------------------chhHHHHHHHHHHHH
Confidence 99998878889999985321000 0 000112233444444
Q ss_pred -CCCccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc---CCCeEEEEecCHHHHHhh
Q 005532 247 -GFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK---QDVPMVIISHDRAFLDQL 322 (692)
Q Consensus 247 -gl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~---~~~tvI~vsHd~~~l~~~ 322 (692)
++. ...++++.+|||||||||+|||||+.+|++|||||||++||+.+++.+.++|++ .+.|||++|||++++..+
T Consensus 120 ~~l~-~~~~~~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~ 198 (222)
T cd03224 120 PRLK-ERRKQLAGTLSGGEQQMLAIARALMSRPKLLLLDEPSEGLAPKIVEEIFEAIRELRDEGVTILLVEQNARFALEI 198 (222)
T ss_pred Hhhh-hhhhCchhhCCHHHHHHHHHHHHHhcCCCEEEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHh
Confidence 243 456788999999999999999999999999999999999999999999888753 578999999999999999
Q ss_pred cCeEEEEecceEEEeccCh
Q 005532 323 CTKIVETEMGVSRTYEGNY 341 (692)
Q Consensus 323 ~d~i~~l~~G~~~~~~G~y 341 (692)
||+|+++++|++. ..|..
T Consensus 199 ~d~i~~l~~G~i~-~~~~~ 216 (222)
T cd03224 199 ADRAYVLERGRVV-LEGTA 216 (222)
T ss_pred ccEEEEeeCCeEE-EeCCH
Confidence 9999999999974 45654
No 147
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=1.9e-41 Score=345.53 Aligned_cols=202 Identities=23% Similarity=0.379 Sum_probs=167.8
Q ss_pred EEEEeEEEEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCC-----CCCccEEEECCCC------------
Q 005532 98 VKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQE-----EPDSGNVIKAKSN------------ 160 (692)
Q Consensus 98 l~i~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~-----~p~~G~I~~~~~~------------ 160 (692)
|+++|++++|+++++|+|+||+|++|++++|+|+||||||||+++|+|++ +|++|+|.++|..
T Consensus 1 i~~~~l~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~ 80 (227)
T cd03260 1 IELRDLNVYYGDKHALKDISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGAPDEGEVLLDGKDIYDLDVDVLELR 80 (227)
T ss_pred CEEEEEEEEcCCceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCCeEEEECCEEhhhcchHHHHHH
Confidence 46899999999889999999999999999999999999999999999999 9999999998742
Q ss_pred ceEEEEcccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHH
Q 005532 161 MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVS 240 (692)
Q Consensus 161 ~~i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 240 (692)
..|+|++|++.++ ..||+||+...... .. .......+.++.
T Consensus 81 ~~i~~~~q~~~~~-~~tv~e~l~~~~~~---------------~~-----------------------~~~~~~~~~~~~ 121 (227)
T cd03260 81 RRVGMVFQKPNPF-PGSIYDNVAYGLRL---------------HG-----------------------IKLKEELDERVE 121 (227)
T ss_pred hhEEEEecCchhc-cccHHHHHHhHHHh---------------cC-----------------------CCcHHHHHHHHH
Confidence 2599999998876 78999998532100 00 000011234566
Q ss_pred HHhhhcCCCccccccc--cccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHccC--CCeEEEEecCH
Q 005532 241 KLMPELGFTADDGDRL--VASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGKQ--DVPMVIISHDR 316 (692)
Q Consensus 241 ~ll~~lgl~~~~~~~~--~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~~--~~tvI~vsHd~ 316 (692)
++++.+|+.. ..++. +.+|||||||||+|||||+.+|++|||||||++||+.+++++.++|++. ..|||+||||+
T Consensus 122 ~~l~~~~l~~-~~~~~~~~~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~ 200 (227)
T cd03260 122 EALRKAALWD-EVKDRLHALGLSGGQQQRLCLARALANEPEVLLLDEPTSALDPISTAKIEELIAELKKEYTIVIVTHNM 200 (227)
T ss_pred HHHHHcCCCh-HHhccCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhhCcEEEEEeccH
Confidence 7888889863 44555 5999999999999999999999999999999999999999999887542 27999999999
Q ss_pred HHHHhhcCeEEEEecceEEEeccC
Q 005532 317 AFLDQLCTKIVETEMGVSRTYEGN 340 (692)
Q Consensus 317 ~~l~~~~d~i~~l~~G~~~~~~G~ 340 (692)
+++..+||+|+++++|++. +.|.
T Consensus 201 ~~~~~~~d~i~~l~~G~i~-~~g~ 223 (227)
T cd03260 201 QQAARVADRTAFLLNGRLV-EFGP 223 (227)
T ss_pred HHHHHhCCEEEEEeCCEEE-EecC
Confidence 9999999999999999974 3343
No 148
>COG1137 YhbG ABC-type (unclassified) transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=1.2e-42 Score=330.98 Aligned_cols=209 Identities=30% Similarity=0.445 Sum_probs=180.4
Q ss_pred CcEEEEeEEEEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCCc-----------eEE
Q 005532 96 SGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSNM-----------KIA 164 (692)
Q Consensus 96 ~~l~i~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~~-----------~i~ 164 (692)
+.+.++|+.|+|+.++++++|||+|++||+|||+||||+||||.+.++.|+++|++|+|.+++.+. .||
T Consensus 3 ~~L~a~~l~K~y~kr~Vv~~Vsl~v~~GEiVGLLGPNGAGKTT~Fymi~Glv~~d~G~i~ld~~diT~lPm~~RArlGig 82 (243)
T COG1137 3 STLVAENLAKSYKKRKVVNDVSLEVNSGEIVGLLGPNGAGKTTTFYMIVGLVRPDSGKILLDDEDITKLPMHKRARLGIG 82 (243)
T ss_pred cEEEehhhhHhhCCeeeeeeeeEEEcCCcEEEEECCCCCCceeEEEEEEEEEecCCceEEECCcccccCChHHHhhcCcc
Confidence 358999999999999999999999999999999999999999999999999999999999987543 599
Q ss_pred EEcccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcc--cHHHHHHHH
Q 005532 165 FLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLD--TLDAKVSKL 242 (692)
Q Consensus 165 ~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~l 242 (692)
|+||++.+|..+||+|||+..+.-.. .+.+ .-..++..+
T Consensus 83 YLpQE~SIFr~LtV~dNi~~vlE~~~---------------------------------------~d~~~~~~~~~l~~L 123 (243)
T COG1137 83 YLPQEASIFRKLTVEDNIMAVLEIRE---------------------------------------KDLKKAERKEELDAL 123 (243)
T ss_pred cccccchHhhcCcHHHHHHHHHhhhh---------------------------------------cchhHHHHHHHHHHH
Confidence 99999999999999999974321100 0111 112346688
Q ss_pred hhhcCCCccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHH---HHHccCCCeEEEEecCHHHH
Q 005532 243 MPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLE---GYLGKQDVPMVIISHDRAFL 319 (692)
Q Consensus 243 l~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~---~~L~~~~~tvI~vsHd~~~l 319 (692)
|+.|.+. ...+.+..+||||||+|+.|||||+.+|+++||||||+|+||.++..+. ..|+..|..|+++.|+..+.
T Consensus 124 L~ef~i~-hlr~~~a~sLSGGERRR~EIARaLa~~P~fiLLDEPFAGVDPiaV~dIq~iI~~L~~rgiGvLITDHNVREt 202 (243)
T COG1137 124 LEEFHIT-HLRDSKAYSLSGGERRRVEIARALAANPKFILLDEPFAGVDPIAVIDIQRIIKHLKDRGIGVLITDHNVRET 202 (243)
T ss_pred HHHhchH-HHhcCcccccccchHHHHHHHHHHhcCCCEEEecCCccCCCchhHHHHHHHHHHHHhCCceEEEccccHHHH
Confidence 8999986 6788999999999999999999999999999999999999998866655 45778899999999999999
Q ss_pred HhhcCeEEEEecceEEEeccChHHHH
Q 005532 320 DQLCTKIVETEMGVSRTYEGNYSQYV 345 (692)
Q Consensus 320 ~~~~d~i~~l~~G~~~~~~G~y~~~~ 345 (692)
..+|||.+++.+|++ .+.|+.++.+
T Consensus 203 L~i~dRaYIi~~G~v-la~G~p~ei~ 227 (243)
T COG1137 203 LDICDRAYIISDGKV-LAEGSPEEIV 227 (243)
T ss_pred HhhhheEEEEecCeE-EecCCHHHHh
Confidence 999999999999998 5788865544
No 149
>PRK15064 ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.3e-41 Score=381.29 Aligned_cols=210 Identities=28% Similarity=0.459 Sum_probs=181.7
Q ss_pred eEEEEeEEEEcCCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccceeeeecccchhhcCC
Q 005532 424 VVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQNQAEALDL 503 (692)
Q Consensus 424 ~l~~~~l~~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~~~~~~~q~~~~~l~~ 503 (692)
+|+++|++++|+++++|+++||+|++|+++||+|||||||||||++|+|+++|++|+|.+++. ...+|++|.. .+..
T Consensus 1 ml~i~~ls~~~~~~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~p~~G~i~~~~~-~~i~~~~q~~--~~~~ 77 (530)
T PRK15064 1 MLSTANITMQFGAKPLFENISVKFGGGNRYGLIGANGCGKSTFMKILGGDLEPSAGNVSLDPN-ERLGKLRQDQ--FAFE 77 (530)
T ss_pred CEEEEEEEEEeCCcEeEeCCEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEecCC-CEEEEEeccC--CcCC
Confidence 489999999999889999999999999999999999999999999999999999999999864 2457777753 3556
Q ss_pred CccHHHHHHHHhc-------------------------------------ccc-HHHHHHHHhhcCCCcccccccCCCCC
Q 005532 504 DKTVLETVAEAAE-------------------------------------DWR-IDDIKGLLGRCNFKADMLDRKVSLLS 545 (692)
Q Consensus 504 ~~tv~e~~~~~~~-------------------------------------~~~-~~~~~~~L~~~~l~~~~~~~~~~~LS 545 (692)
..|+.+++..... .+. ...+..+|+.+|+.....++++.+||
T Consensus 78 ~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LS 157 (530)
T PRK15064 78 EFTVLDTVIMGHTELWEVKQERDRIYALPEMSEEDGMKVADLEVKFAEMDGYTAEARAGELLLGVGIPEEQHYGLMSEVA 157 (530)
T ss_pred CCcHHHHHHHhhHHHHHHHHHHHHHhcccccccchHHHHHHHHHHHHhcCchhHHHHHHHHHHhCCCChhHhcCchhhcC
Confidence 7899888764210 001 13466889999996433457899999
Q ss_pred HHHHHHHHHHHHhccCCcEEEEeCCCCCCCHHHHHHHHHHHHhcCceEEEEecCHHHHHhhccEEEEEECCEEEEecCCh
Q 005532 546 GGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEYKGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDY 625 (692)
Q Consensus 546 gGqkqrv~LAral~~~p~lLlLDEPTn~LD~~~~~~l~~~l~~~~~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~ 625 (692)
|||||||+|||+|+.+|+||||||||||||+.++.+|.+.|.+.+.|||+||||++++..+||+|++|++|++..|.|+|
T Consensus 158 gGq~qrv~lA~aL~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~tiiivsHd~~~~~~~~d~i~~l~~g~i~~~~g~~ 237 (530)
T PRK15064 158 PGWKLRVLLAQALFSNPDILLLDEPTNNLDINTIRWLEDVLNERNSTMIIISHDRHFLNSVCTHMADLDYGELRVYPGNY 237 (530)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEcCCCcccCHHHHHHHHHHHHhCCCeEEEEeCCHHHHHhhcceEEEEeCCEEEEecCCH
Confidence 99999999999999999999999999999999999999999988889999999999999999999999999997789999
Q ss_pred hHHHHHhHHHH
Q 005532 626 NYYLEKNLDAR 636 (692)
Q Consensus 626 ~~~~~~~~~~~ 636 (692)
++|..+++...
T Consensus 238 ~~~~~~~~~~~ 248 (530)
T PRK15064 238 DEYMTAATQAR 248 (530)
T ss_pred HHHHHHHHHHH
Confidence 99987666443
No 150
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.3e-41 Score=367.66 Aligned_cols=192 Identities=24% Similarity=0.346 Sum_probs=163.3
Q ss_pred eceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC--------------ceEEEEcccCccCCCC
Q 005532 111 TVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN--------------MKIAFLSQEFEVSMSR 176 (692)
Q Consensus 111 ~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~--------------~~i~~v~Q~~~~~~~~ 176 (692)
.+|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.+ ..|+|++|++.++++.
T Consensus 42 ~~L~~isl~i~~Gei~~LvG~NGsGKSTLLr~I~Gl~~p~sG~I~i~G~~i~~~~~~~l~~~~~~~igyv~Q~~~l~~~~ 121 (400)
T PRK10070 42 LGVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEPTRGQVLIDGVDIAKISDAELREVRRKKIAMVFQSFALMPHM 121 (400)
T ss_pred EEEEeEEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCEEEECCEECCcCCHHHHHHHHhCCEEEEECCCcCCCCC
Confidence 38999999999999999999999999999999999999999999998742 2599999999988889
Q ss_pred CHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHHhhhcCCCccccccc
Q 005532 177 TVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFTADDGDRL 256 (692)
Q Consensus 177 Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl~~~~~~~~ 256 (692)
||.||+...... . ........+++.++++.+|+. ...+++
T Consensus 122 Tv~enl~~~~~~---------------~------------------------~~~~~~~~~~~~e~L~~~gL~-~~~~~~ 161 (400)
T PRK10070 122 TVLDNTAFGMEL---------------A------------------------GINAEERREKALDALRQVGLE-NYAHSY 161 (400)
T ss_pred CHHHHHHHHHHh---------------c------------------------CCCHHHHHHHHHHHHHHcCCC-hhhhcC
Confidence 999998532100 0 001112234567889999996 577899
Q ss_pred cccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHc----cCCCeEEEEecCHHHHHhhcCeEEEEecc
Q 005532 257 VASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG----KQDVPMVIISHDRAFLDQLCTKIVETEMG 332 (692)
Q Consensus 257 ~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~----~~~~tvI~vsHd~~~l~~~~d~i~~l~~G 332 (692)
+.+|||||||||+|||||+.+|+||||||||++||+.+++.+.++|. +.++|||+||||++++..+||+|++|++|
T Consensus 162 ~~~LSgGq~QRv~LArAL~~~P~iLLLDEPts~LD~~~r~~l~~~L~~l~~~~g~TIIivTHd~~~~~~~~Dri~vL~~G 241 (400)
T PRK10070 162 PDELSGGMRQRVGLARALAINPDILLMDEAFSALDPLIRTEMQDELVKLQAKHQRTIVFISHDLDEAMRIGDRIAIMQNG 241 (400)
T ss_pred cccCCHHHHHHHHHHHHHhcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHCCCeEEEEECCHHHHHHhCCEEEEEECC
Confidence 99999999999999999999999999999999999999999988774 25899999999999999999999999999
Q ss_pred eEEEeccChHH
Q 005532 333 VSRTYEGNYSQ 343 (692)
Q Consensus 333 ~~~~~~G~y~~ 343 (692)
++. ..|...+
T Consensus 242 ~i~-~~g~~~~ 251 (400)
T PRK10070 242 EVV-QVGTPDE 251 (400)
T ss_pred EEE-ecCCHHH
Confidence 984 5565443
No 151
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=100.00 E-value=4.7e-41 Score=347.03 Aligned_cols=208 Identities=21% Similarity=0.297 Sum_probs=173.1
Q ss_pred cEEEEeEEEEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCC-----ccEEEECCCC-----------
Q 005532 97 GVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPD-----SGNVIKAKSN----------- 160 (692)
Q Consensus 97 ~l~i~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~-----~G~I~~~~~~----------- 160 (692)
+|+++|++++|++.++|+|+||+|++||+++|+|+||||||||+++|+|+++|+ +|+|.++|.+
T Consensus 1 ~l~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~~~~~~~~~~~~~ 80 (247)
T TIGR00972 1 AIEIENLNLFYGEKEALKNINLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQDIYDKKIDVVEL 80 (247)
T ss_pred CEEEEEEEEEECCeeeecceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCEEccccccchHHH
Confidence 388999999999888999999999999999999999999999999999999998 9999998642
Q ss_pred -ceEEEEcccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHH
Q 005532 161 -MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKV 239 (692)
Q Consensus 161 -~~i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 239 (692)
..|+|++|++.+++ .|+.+|+...... .. .........++
T Consensus 81 ~~~i~~v~q~~~~~~-~tv~e~l~~~~~~---------------~~-----------------------~~~~~~~~~~~ 121 (247)
T TIGR00972 81 RRRVGMVFQKPNPFP-MSIYDNIAYGPRL---------------HG-----------------------IKDKKELDEIV 121 (247)
T ss_pred HhheEEEecCcccCC-CCHHHHHHhHHHh---------------cC-----------------------CCCHHHHHHHH
Confidence 25999999998876 9999998532100 00 00011223456
Q ss_pred HHHhhhcCCCc---cccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc--CCCeEEEEec
Q 005532 240 SKLMPELGFTA---DDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVIISH 314 (692)
Q Consensus 240 ~~ll~~lgl~~---~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~--~~~tvI~vsH 314 (692)
.++++.+|+.. ...++++.+|||||||||+|||||+.+|++|||||||++||+.++..+.++|++ .+.|||+|||
T Consensus 122 ~~~l~~~~l~~~~~~~~~~~~~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivsH 201 (247)
T TIGR00972 122 EESLKKAALWDEVKDRLHDSALGLSGGQQQRLCIARALAVEPEVLLLDEPTSALDPIATGKIEELIQELKKKYTIVIVTH 201 (247)
T ss_pred HHHHHHcCCCcchhhHhhCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCeEEEEec
Confidence 67788888852 356788999999999999999999999999999999999999999999888754 2589999999
Q ss_pred CHHHHHhhcCeEEEEecceEEEeccChHHH
Q 005532 315 DRAFLDQLCTKIVETEMGVSRTYEGNYSQY 344 (692)
Q Consensus 315 d~~~l~~~~d~i~~l~~G~~~~~~G~y~~~ 344 (692)
|++++..+||+|++|++|++. ..|...++
T Consensus 202 ~~~~~~~~~d~i~~l~~G~i~-~~~~~~~~ 230 (247)
T TIGR00972 202 NMQQAARISDRTAFFYDGELV-EYGPTEQI 230 (247)
T ss_pred CHHHHHHhCCEEEEEECCEEE-EeCCHHHH
Confidence 999999999999999999984 45655443
No 152
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=1.8e-41 Score=340.30 Aligned_cols=192 Identities=29% Similarity=0.467 Sum_probs=166.9
Q ss_pred EEEeEEEEcCC-eecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccc-------eeeeecccc
Q 005532 426 TIKNLEFGYED-RLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNV-------LPNYFEQNQ 497 (692)
Q Consensus 426 ~~~~l~~~y~~-~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~-------~~~~~~q~~ 497 (692)
+++|+++.|++ +.+|+++||+|++|++++|+|||||||||||++|+|+++|++|+|.++|.++ ..+|++|+.
T Consensus 1 ~~~~l~~~~~~~~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~i~~~~q~~ 80 (205)
T cd03226 1 RIENISFSYKKGTEILDDLSLDLYAGEIIALTGKNGAGKTTLAKILAGLIKESSGSILLNGKPIKAKERRKSIGYVMQDV 80 (205)
T ss_pred CcccEEEEeCCcCceeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEhhhHHhhcceEEEecCh
Confidence 36899999987 7899999999999999999999999999999999999999999999998764 245777653
Q ss_pred hhhcCCCccHHHHHHHHhcc--ccHHHHHHHHhhcCCCcccccccCCCCCHHHHHHHHHHHHhccCCcEEEEeCCCCCCC
Q 005532 498 AEALDLDKTVLETVAEAAED--WRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLD 575 (692)
Q Consensus 498 ~~~l~~~~tv~e~~~~~~~~--~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~LAral~~~p~lLlLDEPTn~LD 575 (692)
...+ +..|+.+|+...... .....+.++++.+++. +..++++.+|||||||||+|||||+.+|++|||||||++||
T Consensus 81 ~~~~-~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD 158 (205)
T cd03226 81 DYQL-FTDSVREELLLGLKELDAGNEQAETVLKDLDLY-ALKERHPLSLSGGQKQRLAIAAALLSGKDLLIFDEPTSGLD 158 (205)
T ss_pred hhhh-hhccHHHHHhhhhhhcCccHHHHHHHHHHcCCc-hhcCCCchhCCHHHHHHHHHHHHHHhCCCEEEEeCCCccCC
Confidence 2222 357999998754321 1234678899999995 56789999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhc---CceEEEEecCHHHHHhhccEEEEEECCEEE
Q 005532 576 IPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKGSNLQ 619 (692)
Q Consensus 576 ~~~~~~l~~~l~~~---~~tviivSHd~~~l~~~~d~i~~l~~g~l~ 619 (692)
+.+++.+.+.|+++ +.|||+||||++++..+||++++|++|+++
T Consensus 159 ~~~~~~l~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~iv 205 (205)
T cd03226 159 YKNMERVGELIRELAAQGKAVIVITHDYEFLAKVCDRVLLLANGAIV 205 (205)
T ss_pred HHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEC
Confidence 99999999999876 469999999999999999999999999863
No 153
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=2.7e-41 Score=364.36 Aligned_cols=199 Identities=24% Similarity=0.323 Sum_probs=170.4
Q ss_pred EEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC--------------ceEEEEcccC
Q 005532 105 KSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN--------------MKIAFLSQEF 170 (692)
Q Consensus 105 ~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~--------------~~i~~v~Q~~ 170 (692)
|.|+++.+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+ ..|+||+|++
T Consensus 1 ~~~~~~~~l~~vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~p~~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~ 80 (363)
T TIGR01186 1 KKTGGKKGVNDADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIEPTAGQIFIDGENIMKQSPVELREVRRKKIGMVFQQF 80 (363)
T ss_pred CccCCceeEEeeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHHHhCcEEEEECCC
Confidence 45788889999999999999999999999999999999999999999999998732 3699999999
Q ss_pred ccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHHhhhcCCCc
Q 005532 171 EVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFTA 250 (692)
Q Consensus 171 ~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl~~ 250 (692)
+++++.||++|+...... .........+++.++++.+|+.
T Consensus 81 ~l~~~~TV~eNi~~~~~~---------------------------------------~~~~~~~~~~~~~~~l~~vgL~- 120 (363)
T TIGR01186 81 ALFPHMTILQNTSLGPEL---------------------------------------LGWPEQERKEKALELLKLVGLE- 120 (363)
T ss_pred cCCCCCCHHHHHHHHHHH---------------------------------------cCCCHHHHHHHHHHHHHhcCCc-
Confidence 999999999998532100 0011122345677889999996
Q ss_pred cccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHc----cCCCeEEEEecCHHHHHhhcCeE
Q 005532 251 DDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG----KQDVPMVIISHDRAFLDQLCTKI 326 (692)
Q Consensus 251 ~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~----~~~~tvI~vsHd~~~l~~~~d~i 326 (692)
...++++.+|||||||||+|||||+.+|+||||||||++||+.+++++.+.|. +.++|||+||||++++..+||+|
T Consensus 121 ~~~~~~p~~LSGGq~QRV~lARAL~~~p~iLLlDEP~saLD~~~r~~l~~~l~~l~~~~~~Tii~vTHd~~ea~~~~drI 200 (363)
T TIGR01186 121 EYEHRYPDELSGGMQQRVGLARALAAEPDILLMDEAFSALDPLIRDSMQDELKKLQATLQKTIVFITHDLDEAIRIGDRI 200 (363)
T ss_pred hhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEE
Confidence 57899999999999999999999999999999999999999999999988764 34899999999999999999999
Q ss_pred EEEecceEEEeccChHHH
Q 005532 327 VETEMGVSRTYEGNYSQY 344 (692)
Q Consensus 327 ~~l~~G~~~~~~G~y~~~ 344 (692)
++|++|++. ..|...++
T Consensus 201 ~vl~~G~iv-~~g~~~ei 217 (363)
T TIGR01186 201 VIMKAGEIV-QVGTPDEI 217 (363)
T ss_pred EEEeCCEEE-eeCCHHHH
Confidence 999999974 55765544
No 154
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of a conserved four gene ABC transporter operon found next to ectoine unilization operons and ectoine biosynthesis operons. Ectoine is a compatible solute that protects enzymes from high osmolarity. It is released by some species in response to hypoosmotic shock, and it is taken up by a number of bacteria as a compatible solute or for consumption. This family shows strong sequence similiarity to a number of amino acid ABC transporter ATP-binding proteins.
Probab=100.00 E-value=4.1e-41 Score=348.56 Aligned_cols=207 Identities=25% Similarity=0.425 Sum_probs=174.6
Q ss_pred EEEEeEEEEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC-----------------
Q 005532 98 VKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN----------------- 160 (692)
Q Consensus 98 l~i~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~----------------- 160 (692)
|+++|+++.|+++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|..
T Consensus 1 i~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~~~ 80 (252)
T TIGR03005 1 VRFSDVTKRFGILTVLDGLNFSVAAGEKVALIGPSGSGKSTILRILMTLEPIDEGQIQVEGEQLYHMPGRNGPLVPADEK 80 (252)
T ss_pred CEEEEEEEEeCCeeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccccccccchh
Confidence 468999999998889999999999999999999999999999999999999999999988632
Q ss_pred ------ceEEEEcccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCccc
Q 005532 161 ------MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDT 234 (692)
Q Consensus 161 ------~~i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (692)
..|+|++|++.+++..|+.+|+....... . ......
T Consensus 81 ~~~~~~~~i~~v~q~~~~~~~~tv~~nl~~~~~~~--------------~------------------------~~~~~~ 122 (252)
T TIGR03005 81 HLRQMRNKIGMVFQSFNLFPHKTVLDNVTEAPVLV--------------L------------------------GMARAE 122 (252)
T ss_pred HHHHHhhCeEEEecCcccCCCCcHHHHHHHHHHHh--------------c------------------------CCCHHH
Confidence 25999999998888899999985321000 0 001112
Q ss_pred HHHHHHHHhhhcCCCccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc----CCCeEE
Q 005532 235 LDAKVSKLMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMV 310 (692)
Q Consensus 235 ~~~~i~~ll~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~----~~~tvI 310 (692)
...++.++++.+|+. ...++.+.+|||||+|||+|||||+.+|++|||||||++||+.++.++.++|++ .+.|||
T Consensus 123 ~~~~~~~~l~~~gl~-~~~~~~~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii 201 (252)
T TIGR03005 123 AEKRAMELLDMVGLA-DKADHMPAQLSGGQQQRVAIARALAMRPKVMLFDEVTSALDPELVGEVLNVIRRLASEHDLTML 201 (252)
T ss_pred HHHHHHHHHHHcCCh-hHhhcChhhcCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEE
Confidence 234566788888986 567888999999999999999999999999999999999999999999887753 488999
Q ss_pred EEecCHHHHHhhcCeEEEEecceEEEeccChHHH
Q 005532 311 IISHDRAFLDQLCTKIVETEMGVSRTYEGNYSQY 344 (692)
Q Consensus 311 ~vsHd~~~l~~~~d~i~~l~~G~~~~~~G~y~~~ 344 (692)
+||||++++..+||+++++++|++. ..|.+.++
T Consensus 202 ivsH~~~~~~~~~d~i~~l~~G~i~-~~g~~~~~ 234 (252)
T TIGR03005 202 LVTHEMGFAREFADRVCFFDKGRIV-EQGKPDEI 234 (252)
T ss_pred EEeCCHHHHHHhcCEEEEEECCEEE-EeCCHHHH
Confidence 9999999999999999999999984 56766544
No 155
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=3.8e-41 Score=361.20 Aligned_cols=203 Identities=26% Similarity=0.370 Sum_probs=176.3
Q ss_pred eEEEEeEEEEcCC----eecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccce----------
Q 005532 424 VVTIKNLEFGYED----RLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL---------- 489 (692)
Q Consensus 424 ~l~~~~l~~~y~~----~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~~---------- 489 (692)
||+++||++.|++ ..+|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.++|.++.
T Consensus 1 mI~~~~lsk~y~~~~~~~~~L~~vsl~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~p~~G~I~i~G~~i~~~~~~~l~~~ 80 (343)
T TIGR02314 1 MIKLSNITKVFHQGTKTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTSGSVIVDGQDLTTLSNSELTKA 80 (343)
T ss_pred CEEEEEEEEEECCCCcceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHHH
Confidence 5899999999952 47999999999999999999999999999999999999999999999987642
Q ss_pred ---eeeecccchhhcCCCccHHHHHHHHhcc--cc----HHHHHHHHhhcCCCcccccccCCCCCHHHHHHHHHHHHhcc
Q 005532 490 ---PNYFEQNQAEALDLDKTVLETVAEAAED--WR----IDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVK 560 (692)
Q Consensus 490 ---~~~~~q~~~~~l~~~~tv~e~~~~~~~~--~~----~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~LAral~~ 560 (692)
.+|++|+. .+.+..|+.+|+...... +. ...+.++|+.+|+. +..++++.+|||||||||+|||||+.
T Consensus 81 r~~Ig~v~Q~~--~l~~~~tv~eni~~~~~~~~~~~~~~~~~v~e~l~~vgL~-~~~~~~~~~LSgGqkQRV~IARAL~~ 157 (343)
T TIGR02314 81 RRQIGMIFQHF--NLLSSRTVFGNVALPLELDNTPKDEIKRKVTELLALVGLG-DKHDSYPSNLSGGQKQRVAIARALAS 157 (343)
T ss_pred hcCEEEEECCc--cccccCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCc-hhhhCChhhCCHHHHHHHHHHHHHHh
Confidence 35666653 566789999999765321 21 23477899999995 67899999999999999999999999
Q ss_pred CCcEEEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEECCEEEEecCChhHHHH
Q 005532 561 PSTLLVLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYYLE 630 (692)
Q Consensus 561 ~p~lLlLDEPTn~LD~~~~~~l~~~l~~~----~~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~~~~~ 630 (692)
+|++|||||||++||+.++..+.+.|++. +.|||+||||++.+.++||+|++|++|+++. .|+.+++..
T Consensus 158 ~P~iLLlDEPts~LD~~t~~~i~~lL~~l~~~~g~tiiliTH~~~~v~~~~d~v~vl~~G~iv~-~g~~~~v~~ 230 (343)
T TIGR02314 158 NPKVLLCDEATSALDPATTQSILELLKEINRRLGLTILLITHEMDVVKRICDCVAVISNGELIE-QGTVSEIFS 230 (343)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEE-EcCHHHHHc
Confidence 99999999999999999999999998764 5699999999999999999999999999985 477766654
No 156
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=100.00 E-value=5.9e-41 Score=359.21 Aligned_cols=211 Identities=21% Similarity=0.385 Sum_probs=176.0
Q ss_pred CCcEEEEeEEEEeCC-------------eeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC-
Q 005532 95 SSGVKLENISKSYKG-------------VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN- 160 (692)
Q Consensus 95 ~~~l~i~~ls~~y~~-------------~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~- 160 (692)
.++|+++|++++|+. .++|+||||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.+
T Consensus 6 ~~~l~v~~l~~~~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTLlk~i~Gl~~p~~G~I~~~G~~i 85 (331)
T PRK15079 6 KVLLEVADLKVHFDIKDGKQWFWQPPKTLKAVDGVTLRLYEGETLGVVGESGCGKSTFARAIIGLVKATDGEVAWLGKDL 85 (331)
T ss_pred CceEEEeCeEEEECCCCccccccccCCceEEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCCcEEEECCEEC
Confidence 357999999999962 469999999999999999999999999999999999999999999998742
Q ss_pred ------------ceEEEEcccC--ccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHH
Q 005532 161 ------------MKIAFLSQEF--EVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRK 226 (692)
Q Consensus 161 ------------~~i~~v~Q~~--~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 226 (692)
..|+|++|+| .+++..||.+||...... ..
T Consensus 86 ~~~~~~~~~~~r~~i~~v~Q~~~~~l~p~~tv~~~i~~~l~~--------------~~---------------------- 129 (331)
T PRK15079 86 LGMKDDEWRAVRSDIQMIFQDPLASLNPRMTIGEIIAEPLRT--------------YH---------------------- 129 (331)
T ss_pred CcCCHHHHHHHhCceEEEecCchhhcCCCCCHHHHHHHHHHH--------------hc----------------------
Confidence 2599999998 466678999998532100 00
Q ss_pred HhhcCcccHHHHHHHHhhhcCCCccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc--
Q 005532 227 AQAVNLDTLDAKVSKLMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK-- 304 (692)
Q Consensus 227 ~~~~~~~~~~~~i~~ll~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~-- 304 (692)
...+......++.++++.+|+.+...++++.+|||||+|||+|||||+.+|+||||||||++||+.++..+.++|++
T Consensus 130 -~~~~~~~~~~~~~~~l~~vgl~~~~~~~~p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~ 208 (331)
T PRK15079 130 -PKLSRQEVKDRVKAMMLKVGLLPNLINRYPHEFSGGQCQRIGIARALILEPKLIICDEPVSALDVSIQAQVVNLLQQLQ 208 (331)
T ss_pred -cCCCHHHHHHHHHHHHHHcCCChHHhcCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHH
Confidence 00111223456678889999965577899999999999999999999999999999999999999999999887642
Q ss_pred --CCCeEEEEecCHHHHHhhcCeEEEEecceEEEeccChHH
Q 005532 305 --QDVPMVIISHDRAFLDQLCTKIVETEMGVSRTYEGNYSQ 343 (692)
Q Consensus 305 --~~~tvI~vsHd~~~l~~~~d~i~~l~~G~~~~~~G~y~~ 343 (692)
.+.|+|+||||++++..+||+|++|.+|++. ..|...+
T Consensus 209 ~~~~~til~iTHdl~~~~~~~dri~vl~~G~iv-e~g~~~~ 248 (331)
T PRK15079 209 REMGLSLIFIAHDLAVVKHISDRVLVMYLGHAV-ELGTYDE 248 (331)
T ss_pred HHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEE-EEcCHHH
Confidence 4899999999999999999999999999984 4566543
No 157
>COG0411 LivG ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=8.5e-42 Score=337.15 Aligned_cols=220 Identities=30% Similarity=0.415 Sum_probs=185.0
Q ss_pred CcEEEEeEEEEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCCc-----------eEE
Q 005532 96 SGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSNM-----------KIA 164 (692)
Q Consensus 96 ~~l~i~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~~-----------~i~ 164 (692)
+.+++++++++||+-.+++||||+|++||+++||||||||||||+++|+|.++|++|+|.+.|.+. .|+
T Consensus 3 ~lL~v~~l~k~FGGl~Al~~Vsl~v~~Gei~~LIGPNGAGKTTlfNlitG~~~P~~G~v~~~G~~it~l~p~~iar~Gi~ 82 (250)
T COG0411 3 PLLEVRGLSKRFGGLTAVNDVSLEVRPGEIVGLIGPNGAGKTTLFNLITGFYKPSSGTVIFRGRDITGLPPHRIARLGIA 82 (250)
T ss_pred ceeeeccceeecCCEEEEeceeEEEcCCeEEEEECCCCCCceeeeeeecccccCCCceEEECCcccCCCCHHHHHhccce
Confidence 468899999999999999999999999999999999999999999999999999999999998642 589
Q ss_pred EEcccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHHhh
Q 005532 165 FLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMP 244 (692)
Q Consensus 165 ~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~ 244 (692)
.-+|.+.+++++||.||++.+...... +...+... ...-...+..+++.++|+
T Consensus 83 RTFQ~~rlF~~lTVlENv~va~~~~~~-------~~~~l~~~--------------------~~~~~e~~~~e~A~~~Le 135 (250)
T COG0411 83 RTFQITRLFPGLTVLENVAVGAHARLG-------LSGLLGRP--------------------RARKEEREARERARELLE 135 (250)
T ss_pred eecccccccCCCcHHHHHHHHhhhhhh-------hhhhhccc--------------------cchhhHHHHHHHHHHHHH
Confidence 999999999999999999754221100 00001000 000012345577889999
Q ss_pred hcCCCccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHc---c-CCCeEEEEecCHHHHH
Q 005532 245 ELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG---K-QDVPMVIISHDRAFLD 320 (692)
Q Consensus 245 ~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~---~-~~~tvI~vsHd~~~l~ 320 (692)
.+|+. +..+++..+||+|||+|+.|||||+.+|++||||||.+||.+.....+.++++ + .|.||++|.||+..+.
T Consensus 136 ~vgL~-~~a~~~A~~LsyG~qR~LEIArALa~~P~lLLLDEPaAGln~~e~~~l~~~i~~i~~~~g~tillIEHdM~~Vm 214 (250)
T COG0411 136 FVGLG-ELADRPAGNLSYGQQRRLEIARALATQPKLLLLDEPAAGLNPEETEELAELIRELRDRGGVTILLIEHDMKLVM 214 (250)
T ss_pred HcCCc-hhhcchhhcCChhHhHHHHHHHHHhcCCCEEEecCccCCCCHHHHHHHHHHHHHHHhcCCcEEEEEEeccHHHh
Confidence 99997 68899999999999999999999999999999999999999999988887764 3 5799999999999999
Q ss_pred hhcCeEEEEecceEEEeccChHHH
Q 005532 321 QLCTKIVETEMGVSRTYEGNYSQY 344 (692)
Q Consensus 321 ~~~d~i~~l~~G~~~~~~G~y~~~ 344 (692)
.+||||++|+.|++ ..+|.+.+.
T Consensus 215 ~l~dri~Vl~~G~~-IAeG~P~eV 237 (250)
T COG0411 215 GLADRIVVLNYGEV-IAEGTPEEV 237 (250)
T ss_pred hhccEEEeccCCcC-cccCCHHHH
Confidence 99999999999997 678987654
No 158
>TIGR01978 sufC FeS assembly ATPase SufC. SufC is part of the SUF system, shown in E. coli to consist of six proteins and believed to act in Fe-S cluster formation during oxidative stress. SufC forms a complex with SufB and SufD. SufC belongs to the ATP-binding cassette transporter family (pfam00005) but is no longer thought to be part of a transporter. The complex is reported as cytosolic (PubMed:12554644) or associated with the membrane (PubMed:11943156). The SUF system also includes a cysteine desulfurase (SufS, enhanced by SufE) and a probable iron-sulfur cluster assembly scaffold protein, SufA.
Probab=100.00 E-value=4.9e-41 Score=345.91 Aligned_cols=212 Identities=25% Similarity=0.327 Sum_probs=173.2
Q ss_pred EEEEeEEEEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCC--CCCccEEEECCCC-----------ceEE
Q 005532 98 VKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQE--EPDSGNVIKAKSN-----------MKIA 164 (692)
Q Consensus 98 l~i~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~--~p~~G~I~~~~~~-----------~~i~ 164 (692)
|+++|++++|+++++|+|+||+|++|++++|+||||||||||+++|+|++ +|++|+|.++|.+ ..++
T Consensus 1 l~~~~l~~~~~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~~i~ 80 (243)
T TIGR01978 1 LKIKDLHVSVEDKEILKGVNLTVKKGEIHAIMGPNGSGKSTLSKTIAGHPSYEVTSGTILFKGQDLLELEPDERARAGLF 80 (243)
T ss_pred CeEeeEEEEECCEEEEeccceEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCcceEEECCEecCCCCHHHhhccceE
Confidence 46899999999888999999999999999999999999999999999995 7999999998742 2389
Q ss_pred EEcccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHHhh
Q 005532 165 FLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMP 244 (692)
Q Consensus 165 ~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~ 244 (692)
|++|++.+++..|+.+|+....... ...... ...+.....+++.++++
T Consensus 81 ~v~q~~~~~~~~t~~~~~~~~~~~~-----------~~~~~~---------------------~~~~~~~~~~~~~~~l~ 128 (243)
T TIGR01978 81 LAFQYPEEIPGVSNLEFLRSALNAR-----------RSARGE---------------------EPLDLLDFLKLLKAKLA 128 (243)
T ss_pred eeeccccccCCcCHHHHHHHHHHHh-----------hccccc---------------------ccccHHHHHHHHHHHHH
Confidence 9999998888889999985321100 000000 00011123356778889
Q ss_pred hcCCCccccccccc-cCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc---CCCeEEEEecCHHHHH
Q 005532 245 ELGFTADDGDRLVA-SFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK---QDVPMVIISHDRAFLD 320 (692)
Q Consensus 245 ~lgl~~~~~~~~~~-~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~---~~~tvI~vsHd~~~l~ 320 (692)
.+|+.....++++. +|||||||||+|||||+.+|++|||||||++||+.+++++.++|++ .+.|||+||||++++.
T Consensus 129 ~~~l~~~~~~~~~~~~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~vsH~~~~~~ 208 (243)
T TIGR01978 129 LLGMDEEFLNRSVNEGFSGGEKKRNEILQMALLEPKLAILDEIDSGLDIDALKIVAEGINRLREPDRSFLIITHYQRLLN 208 (243)
T ss_pred HcCCchhhcccccccCcCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCcEEEEEEecHHHHH
Confidence 99996445677776 5999999999999999999999999999999999999999988754 4789999999999999
Q ss_pred hh-cCeEEEEecceEEEeccChH
Q 005532 321 QL-CTKIVETEMGVSRTYEGNYS 342 (692)
Q Consensus 321 ~~-~d~i~~l~~G~~~~~~G~y~ 342 (692)
.+ ||+|+++++|++ .+.|+++
T Consensus 209 ~~~~d~i~~l~~G~i-~~~g~~~ 230 (243)
T TIGR01978 209 YIKPDYVHVLLDGRI-VKSGDVE 230 (243)
T ss_pred hhcCCeEEEEeCCEE-EEecCHH
Confidence 98 899999999998 4567654
No 159
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=5.2e-41 Score=348.87 Aligned_cols=206 Identities=29% Similarity=0.394 Sum_probs=173.5
Q ss_pred cEEEEeEEEEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC----------ceEEEE
Q 005532 97 GVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN----------MKIAFL 166 (692)
Q Consensus 97 ~l~i~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~----------~~i~~v 166 (692)
+|+++|+++.|+++++|+|+||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|.. ..++|+
T Consensus 2 ~l~~~~l~~~~~~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~G~i~~~g~~~~~~~~~~~~~~i~~~ 81 (258)
T PRK13548 2 MLEARNLSVRLGGRTLLDDVSLTLRPGEVVAILGPNGAGKSTLLRALSGELSPDSGEVRLNGRPLADWSPAELARRRAVL 81 (258)
T ss_pred eEEEEeEEEEeCCeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEEcccCCHHHhhhheEEE
Confidence 4899999999998889999999999999999999999999999999999999999999998742 258999
Q ss_pred cccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHHhhhc
Q 005532 167 SQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPEL 246 (692)
Q Consensus 167 ~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~l 246 (692)
+|++.+++..||+||+....... .........++.++++.+
T Consensus 82 ~q~~~~~~~~tv~e~l~~~~~~~---------------------------------------~~~~~~~~~~~~~~l~~~ 122 (258)
T PRK13548 82 PQHSSLSFPFTVEEVVAMGRAPH---------------------------------------GLSRAEDDALVAAALAQV 122 (258)
T ss_pred ccCCcCCCCCCHHHHHHhhhccc---------------------------------------CCCcHHHHHHHHHHHHHc
Confidence 99988878889999985321000 000011223456778888
Q ss_pred CCCccccccccccCChHHHHHHHHHHHHc------cCCCeEEEcCCCCCCCHHHHHHHHHHHc----cCCCeEEEEecCH
Q 005532 247 GFTADDGDRLVASFSSGWQMRMSLGKILL------QDPDLLLLDEPTNHLDLDTIEWLEGYLG----KQDVPMVIISHDR 316 (692)
Q Consensus 247 gl~~~~~~~~~~~LSGGqkqRvaLAraL~------~~p~lLLLDEPts~LD~~~~~~L~~~L~----~~~~tvI~vsHd~ 316 (692)
|+. ...++.+.+|||||||||+|||||+ .+|++|||||||++||+.+++.+.++|+ +.+.|||+||||+
T Consensus 123 ~l~-~~~~~~~~~LSgGe~qrv~la~al~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~ 201 (258)
T PRK13548 123 DLA-HLAGRDYPQLSGGEQQRVQLARVLAQLWEPDGPPRWLLLDEPTSALDLAHQHHVLRLARQLAHERGLAVIVVLHDL 201 (258)
T ss_pred CCH-hHhcCCcccCCHHHHHHHHHHHHHhcccccCCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCH
Confidence 886 5678889999999999999999999 5999999999999999999998887764 4578999999999
Q ss_pred HHHHhhcCeEEEEecceEEEeccChHH
Q 005532 317 AFLDQLCTKIVETEMGVSRTYEGNYSQ 343 (692)
Q Consensus 317 ~~l~~~~d~i~~l~~G~~~~~~G~y~~ 343 (692)
+++..+||+|+++++|++. +.|.+.+
T Consensus 202 ~~~~~~~d~i~~l~~G~i~-~~~~~~~ 227 (258)
T PRK13548 202 NLAARYADRIVLLHQGRLV-ADGTPAE 227 (258)
T ss_pred HHHHHhcCEEEEEECCEEE-eeCCHHH
Confidence 9999999999999999974 5566544
No 160
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=100.00 E-value=5e-41 Score=348.16 Aligned_cols=196 Identities=29% Similarity=0.429 Sum_probs=171.9
Q ss_pred CceEEEEeEEEEcCCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccc-----eeeeeccc
Q 005532 422 RSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNV-----LPNYFEQN 496 (692)
Q Consensus 422 ~~~l~~~~l~~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~-----~~~~~~q~ 496 (692)
.++|+++||+++|+++.+|+++||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.++ ..+|++|.
T Consensus 10 ~~~l~i~~l~~~~~~~~il~~isl~i~~Ge~~~I~G~NGsGKSTLlk~l~Gl~~p~~G~i~~~g~~~~~~~~~i~~v~q~ 89 (257)
T PRK11247 10 GTPLLLNAVSKRYGERTVLNQLDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLETPSAGELLAGTAPLAEAREDTRLMFQD 89 (257)
T ss_pred CCcEEEEEEEEEECCcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEHHHhhCceEEEecC
Confidence 4569999999999988899999999999999999999999999999999999999999999987653 24577765
Q ss_pred chhhcCCCccHHHHHHHHhccccHHHHHHHHhhcCCCcccccccCCCCCHHHHHHHHHHHHhccCCcEEEEeCCCCCCCH
Q 005532 497 QAEALDLDKTVLETVAEAAEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDI 576 (692)
Q Consensus 497 ~~~~l~~~~tv~e~~~~~~~~~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~LAral~~~p~lLlLDEPTn~LD~ 576 (692)
. .+.+..|+.+|+...........+.++++.+++. ...++++.+|||||||||+|||+|+.+|++|||||||++||+
T Consensus 90 ~--~l~~~~tv~enl~~~~~~~~~~~~~~~l~~~gl~-~~~~~~~~~LSgGqkqrl~laraL~~~p~lllLDEPt~~LD~ 166 (257)
T PRK11247 90 A--RLLPWKKVIDNVGLGLKGQWRDAALQALAAVGLA-DRANEWPAALSGGQKQRVALARALIHRPGLLLLDEPLGALDA 166 (257)
T ss_pred c--cCCCCCcHHHHHHhcccchHHHHHHHHHHHcCCh-hHhcCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCH
Confidence 3 4556689999987643211234578899999995 567899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEECCEEEE
Q 005532 577 PSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQD 620 (692)
Q Consensus 577 ~~~~~l~~~l~~~----~~tviivSHd~~~l~~~~d~i~~l~~g~l~~ 620 (692)
.++..+.+.|.++ +.|||+||||++++..+||+|++|++|++..
T Consensus 167 ~~~~~l~~~L~~~~~~~~~tviivsHd~~~~~~~~d~i~~l~~G~i~~ 214 (257)
T PRK11247 167 LTRIEMQDLIESLWQQHGFTVLLVTHDVSEAVAMADRVLLIEEGKIGL 214 (257)
T ss_pred HHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEe
Confidence 9999999988754 5699999999999999999999999999974
No 161
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.4e-41 Score=346.20 Aligned_cols=211 Identities=21% Similarity=0.281 Sum_probs=174.5
Q ss_pred CcEEEEeEEEEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCC-----CccEEEECCCC----------
Q 005532 96 SGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEP-----DSGNVIKAKSN---------- 160 (692)
Q Consensus 96 ~~l~i~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p-----~~G~I~~~~~~---------- 160 (692)
+.|+++|++++|+++++|+|+||+|++|++++|+|+||||||||+++|+|+++| ++|+|.++|.+
T Consensus 2 ~~l~~~~l~~~~~~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~ 81 (250)
T PRK14247 2 NKIEIRDLKVSFGQVEVLDGVNLEIPDNTITALMGPSGSGKSTLLRVFNRLIELYPEARVSGEVYLDGQDIFKMDVIELR 81 (250)
T ss_pred ceEEEEeeEEEECCeeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCCCCceEEEECCEECCcCCHHHHh
Confidence 369999999999988899999999999999999999999999999999999974 69999998742
Q ss_pred ceEEEEcccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHH
Q 005532 161 MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVS 240 (692)
Q Consensus 161 ~~i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 240 (692)
..|+|++|++.+++..||.+|+...... ... ........+++.
T Consensus 82 ~~i~~v~q~~~~~~~~tv~enl~~~~~~---------------~~~----------------------~~~~~~~~~~~~ 124 (250)
T PRK14247 82 RRVQMVFQIPNPIPNLSIFENVALGLKL---------------NRL----------------------VKSKKELQERVR 124 (250)
T ss_pred ccEEEEeccCccCCCCcHHHHHHHHHHh---------------ccc----------------------cCCHHHHHHHHH
Confidence 3599999998877889999998532110 000 000011234556
Q ss_pred HHhhhcCCCc---cccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc--CCCeEEEEecC
Q 005532 241 KLMPELGFTA---DDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVIISHD 315 (692)
Q Consensus 241 ~ll~~lgl~~---~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~--~~~tvI~vsHd 315 (692)
++++.+|+.. ...++++.+|||||||||+|||||+.+|+||||||||++||+.+++++.++|++ .+.|||+||||
T Consensus 125 ~~l~~~~l~~~~~~~~~~~~~~LSgG~~qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~ 204 (250)
T PRK14247 125 WALEKAQLWDEVKDRLDAPAGKLSGGQQQRLCIARALAFQPEVLLADEPTANLDPENTAKIESLFLELKKDMTIVLVTHF 204 (250)
T ss_pred HHHHHcCCCcchhhhhcCCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCC
Confidence 7778888742 246888999999999999999999999999999999999999999999888754 37899999999
Q ss_pred HHHHHhhcCeEEEEecceEEEeccChHHH
Q 005532 316 RAFLDQLCTKIVETEMGVSRTYEGNYSQY 344 (692)
Q Consensus 316 ~~~l~~~~d~i~~l~~G~~~~~~G~y~~~ 344 (692)
++++..+||+|+++++|++ ...|...+.
T Consensus 205 ~~~~~~~~d~i~~l~~G~i-~~~g~~~~~ 232 (250)
T PRK14247 205 PQQAARISDYVAFLYKGQI-VEWGPTREV 232 (250)
T ss_pred HHHHHHhcCEEEEEECCeE-EEECCHHHH
Confidence 9999999999999999997 456765443
No 162
>PRK15112 antimicrobial peptide ABC system ATP-binding protein SapF; Provisional
Probab=100.00 E-value=5.1e-41 Score=350.67 Aligned_cols=210 Identities=17% Similarity=0.377 Sum_probs=173.0
Q ss_pred CcEEEEeEEEEeCC---------eeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC------
Q 005532 96 SGVKLENISKSYKG---------VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN------ 160 (692)
Q Consensus 96 ~~l~i~~ls~~y~~---------~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~------ 160 (692)
++|+++|++++|+. .++|+|+||+|++|++++|+|||||||||||++|+|+++|++|+|.++|..
T Consensus 3 ~~l~~~~l~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~ 82 (267)
T PRK15112 3 TLLEVRNLSKTFRYRTGWFRRQTVEAVKPLSFTLREGQTLAIIGENGSGKSTLAKMLAGMIEPTSGELLIDDHPLHFGDY 82 (267)
T ss_pred ceEEEeceEEEecCCCCcccccccceeeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCch
Confidence 46999999999962 469999999999999999999999999999999999999999999998632
Q ss_pred ----ceEEEEcccCc--cCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCccc
Q 005532 161 ----MKIAFLSQEFE--VSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDT 234 (692)
Q Consensus 161 ----~~i~~v~Q~~~--~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (692)
..|+|++|++. +.+..|+.+++...... . .......
T Consensus 83 ~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~---------------~-----------------------~~~~~~~ 124 (267)
T PRK15112 83 SYRSQRIRMIFQDPSTSLNPRQRISQILDFPLRL---------------N-----------------------TDLEPEQ 124 (267)
T ss_pred hhHhccEEEEecCchhhcCcchhHHHHHHHHHHh---------------c-----------------------cCCCHHH
Confidence 25999999974 34556888886421100 0 0001112
Q ss_pred HHHHHHHHhhhcCCCccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc----CCCeEE
Q 005532 235 LDAKVSKLMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMV 310 (692)
Q Consensus 235 ~~~~i~~ll~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~----~~~tvI 310 (692)
..+++.++++.+|+.+...++++.+|||||||||+|||||+.+|+||||||||++||+.+++++.+.|.+ .+.|||
T Consensus 125 ~~~~~~~~l~~~~l~~~~~~~~~~~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvi 204 (267)
T PRK15112 125 REKQIIETLRQVGLLPDHASYYPHMLAPGQKQRLGLARALILRPKVIIADEALASLDMSMRSQLINLMLELQEKQGISYI 204 (267)
T ss_pred HHHHHHHHHHHcCCChHHHhcCchhcCHHHHHHHHHHHHHHhCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCcEEE
Confidence 2345677888999854566788899999999999999999999999999999999999999999887753 488999
Q ss_pred EEecCHHHHHhhcCeEEEEecceEEEeccChHHH
Q 005532 311 IISHDRAFLDQLCTKIVETEMGVSRTYEGNYSQY 344 (692)
Q Consensus 311 ~vsHd~~~l~~~~d~i~~l~~G~~~~~~G~y~~~ 344 (692)
+|||+++++..+||+|+++++|++. ..|.+.++
T Consensus 205 ivsH~~~~~~~~~d~i~~l~~G~i~-~~~~~~~~ 237 (267)
T PRK15112 205 YVTQHLGMMKHISDQVLVMHQGEVV-ERGSTADV 237 (267)
T ss_pred EEeCCHHHHHHhcCEEEEEECCEEE-ecCCHHHH
Confidence 9999999999999999999999984 56766544
No 163
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE. This family represents the NikE subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase.
Probab=100.00 E-value=5e-41 Score=350.38 Aligned_cols=208 Identities=25% Similarity=0.465 Sum_probs=172.0
Q ss_pred cEEEEeEEEEeC---------CeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC-------
Q 005532 97 GVKLENISKSYK---------GVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN------- 160 (692)
Q Consensus 97 ~l~i~~ls~~y~---------~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~------- 160 (692)
+|+++|++|.|+ ++++|+|+||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|..
T Consensus 2 ~l~~~~l~~~~~~~~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~ 81 (265)
T TIGR02769 2 LLEVRDVTHTYRTGGLFGAKQRAPVLTNVSLSIEEGETVGLLGRSGCGKSTLARLLLGLEKPAQGTVSFRGQDLYQLDRK 81 (265)
T ss_pred eEEEEeEEEEeccCccccccCceEEeeCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEccccCHH
Confidence 489999999996 3579999999999999999999999999999999999999999999998732
Q ss_pred ------ceEEEEcccCc--cCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCc
Q 005532 161 ------MKIAFLSQEFE--VSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNL 232 (692)
Q Consensus 161 ------~~i~~v~Q~~~--~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (692)
..|+|++|++. +.+..|+.+|+...... .. .+..
T Consensus 82 ~~~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~--------------~~------------------------~~~~ 123 (265)
T TIGR02769 82 QRRAFRRDVQLVFQDSPSAVNPRMTVRQIIGEPLRH--------------LT------------------------SLDE 123 (265)
T ss_pred HHHHHhhceEEEecChhhhcCCCCCHHHHHHHHHHH--------------hc------------------------CCCH
Confidence 24999999973 44568999997422100 00 0011
Q ss_pred ccHHHHHHHHhhhcCCCccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc----CCCe
Q 005532 233 DTLDAKVSKLMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVP 308 (692)
Q Consensus 233 ~~~~~~i~~ll~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~----~~~t 308 (692)
.....++.++++.+|+.....++++.+|||||||||+|||||+.+|+||||||||++||+.+++.+.++|++ .+.|
T Consensus 124 ~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGe~qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~t 203 (265)
T TIGR02769 124 SEQKARIAELLDMVGLRSEDADKLPRQLSGGQLQRINIARALAVKPKLIVLDEAVSNLDMVLQAVILELLRKLQQAFGTA 203 (265)
T ss_pred HHHHHHHHHHHHHcCCChhhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcE
Confidence 122345667888899864567889999999999999999999999999999999999999999888877643 4899
Q ss_pred EEEEecCHHHHHhhcCeEEEEecceEEEeccChHH
Q 005532 309 MVIISHDRAFLDQLCTKIVETEMGVSRTYEGNYSQ 343 (692)
Q Consensus 309 vI~vsHd~~~l~~~~d~i~~l~~G~~~~~~G~y~~ 343 (692)
||+||||++++..+||+++++++|++. ..|...+
T Consensus 204 iiivsH~~~~~~~~~d~i~~l~~G~i~-~~g~~~~ 237 (265)
T TIGR02769 204 YLFITHDLRLVQSFCQRVAVMDKGQIV-EECDVAQ 237 (265)
T ss_pred EEEEeCCHHHHHHHhcEEEEEeCCEEE-EECCHHH
Confidence 999999999999999999999999974 5666543
No 164
>PRK11819 putative ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=1.7e-40 Score=380.63 Aligned_cols=209 Identities=32% Similarity=0.575 Sum_probs=183.4
Q ss_pred CceEEEEeEEEEcC-CeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccceeeeecccchhh
Q 005532 422 RSVVTIKNLEFGYE-DRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQNQAEA 500 (692)
Q Consensus 422 ~~~l~~~~l~~~y~-~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~~~~~~~q~~~~~ 500 (692)
+++|+++||++.|+ ++++|+++||+|++|+++||+|||||||||||++|+|+++|++|+|.+++. ...+|++|+. .
T Consensus 4 ~~~l~i~~l~~~y~~~~~il~~vs~~i~~Ge~~~iiG~NGsGKSTLlk~i~G~~~p~~G~i~~~~~-~~i~~v~Q~~--~ 80 (556)
T PRK11819 4 QYIYTMNRVSKVVPPKKQILKDISLSFFPGAKIGVLGLNGAGKSTLLRIMAGVDKEFEGEARPAPG-IKVGYLPQEP--Q 80 (556)
T ss_pred cEEEEEeeEEEEeCCCCeeeeCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEecCC-CEEEEEecCC--C
Confidence 45799999999998 788999999999999999999999999999999999999999999998643 3567888763 4
Q ss_pred cCCCccHHHHHHHHhc----------------c-------------------------cc-HHHHHHHHhhcCCCccccc
Q 005532 501 LDLDKTVLETVAEAAE----------------D-------------------------WR-IDDIKGLLGRCNFKADMLD 538 (692)
Q Consensus 501 l~~~~tv~e~~~~~~~----------------~-------------------------~~-~~~~~~~L~~~~l~~~~~~ 538 (692)
+.+..|+.+|+..... . |. ...+..+++.+|+. . .+
T Consensus 81 ~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~-~-~~ 158 (556)
T PRK11819 81 LDPEKTVRENVEEGVAEVKAALDRFNEIYAAYAEPDADFDALAAEQGELQEIIDAADAWDLDSQLEIAMDALRCP-P-WD 158 (556)
T ss_pred CCCCCcHHHHHHHhhHHHHHHHHHHHHHHHHhccCchhhHHHHHHHHHHHHHHHhcCccchHHHHHHHHHhCCCC-c-cc
Confidence 5567899999864210 0 11 13466788999994 3 68
Q ss_pred ccCCCCCHHHHHHHHHHHHhccCCcEEEEeCCCCCCCHHHHHHHHHHHHhcCceEEEEecCHHHHHhhccEEEEEECCEE
Q 005532 539 RKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEYKGTVITVSHDRYFVKQIVNRVVEVKGSNL 618 (692)
Q Consensus 539 ~~~~~LSgGqkqrv~LAral~~~p~lLlLDEPTn~LD~~~~~~l~~~l~~~~~tviivSHd~~~l~~~~d~i~~l~~g~l 618 (692)
+++.+|||||||||+|||+|+.+|+||||||||||||+.++.++.+.|+++.+|||+||||++++..+||+|++|++|++
T Consensus 159 ~~~~~LSgGqkqrv~la~al~~~p~vlLLDEPt~~LD~~~~~~l~~~L~~~~~tviiisHd~~~~~~~~d~i~~l~~g~i 238 (556)
T PRK11819 159 AKVTKLSGGERRRVALCRLLLEKPDMLLLDEPTNHLDAESVAWLEQFLHDYPGTVVAVTHDRYFLDNVAGWILELDRGRG 238 (556)
T ss_pred CchhhcCHHHHHHHHHHHHHhCCCCEEEEcCCCCcCChHHHHHHHHHHHhCCCeEEEEeCCHHHHHhhcCeEEEEeCCEE
Confidence 99999999999999999999999999999999999999999999999999988999999999999999999999999999
Q ss_pred EEecCChhHHHHHhHHH
Q 005532 619 QDYAGDYNYYLEKNLDA 635 (692)
Q Consensus 619 ~~~~g~~~~~~~~~~~~ 635 (692)
..|.|+|+.|.+.++..
T Consensus 239 ~~~~g~~~~~~~~~~~~ 255 (556)
T PRK11819 239 IPWEGNYSSWLEQKAKR 255 (556)
T ss_pred EEecCCHHHHHHHHHHH
Confidence 88999999998766543
No 165
>PRK11701 phnK phosphonate C-P lyase system protein PhnK; Provisional
Probab=100.00 E-value=8.4e-41 Score=347.39 Aligned_cols=209 Identities=25% Similarity=0.395 Sum_probs=173.0
Q ss_pred CcEEEEeEEEEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC---------------
Q 005532 96 SGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN--------------- 160 (692)
Q Consensus 96 ~~l~i~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~--------------- 160 (692)
++|+++|++++|+++++|+|+||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|.+
T Consensus 5 ~~l~~~~l~~~~~~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~i~~~~~~~~~ 84 (258)
T PRK11701 5 PLLSVRGLTKLYGPRKGCRDVSFDLYPGEVLGIVGESGSGKTTLLNALSARLAPDAGEVHYRMRDGQLRDLYALSEAERR 84 (258)
T ss_pred ceEEEeeeEEEcCCceeeeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCccccccccccCCHHHHH
Confidence 36999999999988889999999999999999999999999999999999999999999998754
Q ss_pred ----ceEEEEcccCc--cCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCccc
Q 005532 161 ----MKIAFLSQEFE--VSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDT 234 (692)
Q Consensus 161 ----~~i~~v~Q~~~--~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (692)
..++|++|++. +....|+.+|+...+.. .. ..+...
T Consensus 85 ~~~~~~i~~v~q~~~~~~~~~~~~~~~i~~~~~~--------------~~------------------------~~~~~~ 126 (258)
T PRK11701 85 RLLRTEWGFVHQHPRDGLRMQVSAGGNIGERLMA--------------VG------------------------ARHYGD 126 (258)
T ss_pred HHhhcceEEEeeCcccccCccccHHHHHHHHHHH--------------hc------------------------cCcHHH
Confidence 14999999974 44566888887421100 00 000011
Q ss_pred HHHHHHHHhhhcCCCccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHc----cCCCeEE
Q 005532 235 LDAKVSKLMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG----KQDVPMV 310 (692)
Q Consensus 235 ~~~~i~~ll~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~----~~~~tvI 310 (692)
...++.++++.+|+.....++++.+|||||+|||+|||||+.+|+||||||||++||+.+++++.+.|+ +.+.|||
T Consensus 127 ~~~~~~~~l~~~~l~~~~~~~~~~~LS~Gq~qrl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii 206 (258)
T PRK11701 127 IRATAGDWLERVEIDAARIDDLPTTFSGGMQQRLQIARNLVTHPRLVFMDEPTGGLDVSVQARLLDLLRGLVRELGLAVV 206 (258)
T ss_pred HHHHHHHHHHHcCCChhHHhCCCccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCcEEE
Confidence 234566778888986446688899999999999999999999999999999999999999999988764 2488999
Q ss_pred EEecCHHHHHhhcCeEEEEecceEEEeccChHH
Q 005532 311 IISHDRAFLDQLCTKIVETEMGVSRTYEGNYSQ 343 (692)
Q Consensus 311 ~vsHd~~~l~~~~d~i~~l~~G~~~~~~G~y~~ 343 (692)
+||||++++..+||+|+++++|++ .+.|...+
T Consensus 207 ~isH~~~~~~~~~d~i~~l~~g~i-~~~~~~~~ 238 (258)
T PRK11701 207 IVTHDLAVARLLAHRLLVMKQGRV-VESGLTDQ 238 (258)
T ss_pred EEeCCHHHHHHhcCEEEEEECCEE-EEeCCHHH
Confidence 999999999999999999999998 45666544
No 166
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=8.3e-41 Score=355.22 Aligned_cols=204 Identities=26% Similarity=0.411 Sum_probs=176.4
Q ss_pred ceEEEEeEEEEcCCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccc---------eeeee
Q 005532 423 SVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNV---------LPNYF 493 (692)
Q Consensus 423 ~~l~~~~l~~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~---------~~~~~ 493 (692)
.+|+++||++.|+++.+|+++||+|++|+++||+||||||||||+++|+|+++|++|+|.++|.++ ..+|+
T Consensus 3 ~~i~~~~l~~~~~~~~~l~~vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~i~~v 82 (303)
T TIGR01288 3 VAIDLVGVSKSYGDKVVVNDLSFTIARGECFGLLGPNGAGKSTIARMLLGMISPDRGKITVLGEPVPSRARLARVAIGVV 82 (303)
T ss_pred cEEEEEeEEEEeCCeEEEcceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECcccHHHHhhcEEEE
Confidence 469999999999988899999999999999999999999999999999999999999999988654 24567
Q ss_pred cccchhhcCCCccHHHHHHHHhc--ccc----HHHHHHHHhhcCCCcccccccCCCCCHHHHHHHHHHHHhccCCcEEEE
Q 005532 494 EQNQAEALDLDKTVLETVAEAAE--DWR----IDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVL 567 (692)
Q Consensus 494 ~q~~~~~l~~~~tv~e~~~~~~~--~~~----~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~LAral~~~p~lLlL 567 (692)
+|+. .+.+..|+.+|+..... ... ...+.++++.+++. ...++++.+|||||||||+|||||+.+|++|||
T Consensus 83 ~q~~--~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~ll~~~~l~-~~~~~~~~~LSgG~~qrv~la~al~~~p~lllL 159 (303)
T TIGR01288 83 PQFD--NLDPEFTVRENLLVFGRYFGMSTREIEAVIPSLLEFARLE-SKADVRVALLSGGMKRRLTLARALINDPQLLIL 159 (303)
T ss_pred eccc--cCCcCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCh-hHhcCchhhCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 7653 45667899999874321 111 12466789999995 567899999999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhccEEEEEECCEEEEecCChhHHHH
Q 005532 568 DEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYYLE 630 (692)
Q Consensus 568 DEPTn~LD~~~~~~l~~~l~~~---~~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~~~~~ 630 (692)
||||+|||+.+++.+.+.|+++ +.|||+||||++++..+||+|++|++|++. +.|+.++...
T Consensus 160 DEPt~gLD~~~~~~l~~~l~~~~~~g~til~~sH~~~~~~~~~d~i~~l~~G~i~-~~g~~~~~~~ 224 (303)
T TIGR01288 160 DEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFMEEAERLCDRLCVLESGRKI-AEGRPHALID 224 (303)
T ss_pred eCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEE-EEcCHHHHHh
Confidence 9999999999999999999876 469999999999999999999999999987 4577766543
No 167
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=2e-41 Score=320.55 Aligned_cols=196 Identities=30% Similarity=0.412 Sum_probs=173.7
Q ss_pred eEEEEeEEEEcCC-eecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccce-------------
Q 005532 424 VVTIKNLEFGYED-RLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL------------- 489 (692)
Q Consensus 424 ~l~~~~l~~~y~~-~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~~------------- 489 (692)
||+++||++.|++ +++|+||||+|++||++-|+||+|||||||||+|++..+|+.|+|+++|.++.
T Consensus 1 mI~f~~V~k~Y~~g~~aL~~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~pt~G~i~~~~~dl~~l~~~~iP~LRR~ 80 (223)
T COG2884 1 MIRFENVSKAYPGGREALRDVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEERPTRGKILVNGHDLSRLKGREIPFLRRQ 80 (223)
T ss_pred CeeehhhhhhcCCCchhhhCceEeecCceEEEEECCCCCCHHHHHHHHHhhhcCCCceEEECCeecccccccccchhhhe
Confidence 5899999999975 55999999999999999999999999999999999999999999999998762
Q ss_pred eeeecccchhhcCCCccHHHHHHHHhccc------cHHHHHHHHhhcCCCcccccccCCCCCHHHHHHHHHHHHhccCCc
Q 005532 490 PNYFEQNQAEALDLDKTVLETVAEAAEDW------RIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPST 563 (692)
Q Consensus 490 ~~~~~q~~~~~l~~~~tv~e~~~~~~~~~------~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~LAral~~~p~ 563 (692)
++.++| +..+.++.||+||+....... -..++.+.|+.+|+. +..+..|.+|||||||||+||||++.+|+
T Consensus 81 IGvVFQ--D~rLL~~~tvyeNVA~pL~v~G~~~~~i~~rV~~~L~~VgL~-~k~~~lP~~LSGGEQQRvaIARAiV~~P~ 157 (223)
T COG2884 81 IGVVFQ--DFRLLPDRTVYENVALPLRVIGKPPREIRRRVSEVLDLVGLK-HKARALPSQLSGGEQQRVAIARAIVNQPA 157 (223)
T ss_pred eeeEee--eccccccchHhhhhhhhhhccCCCHHHHHHHHHHHHHHhccc-hhhhcCccccCchHHHHHHHHHHHccCCC
Confidence 345555 456778999999998764311 124688899999995 56788999999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhccEEEEEECCEEEEec
Q 005532 564 LLVLDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYA 622 (692)
Q Consensus 564 lLlLDEPTn~LD~~~~~~l~~~l~~~---~~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~ 622 (692)
|||.||||.+||++....|++++.++ +.||||.|||.+.+.++-.|++.|++|++..+.
T Consensus 158 vLlADEPTGNLDp~~s~~im~lfeeinr~GtTVl~ATHd~~lv~~~~~rvl~l~~Grl~~d~ 219 (223)
T COG2884 158 VLLADEPTGNLDPDLSWEIMRLFEEINRLGTTVLMATHDLELVNRMRHRVLALEDGRLVRDE 219 (223)
T ss_pred eEeecCCCCCCChHHHHHHHHHHHHHhhcCcEEEEEeccHHHHHhccCcEEEEeCCEEEecc
Confidence 99999999999999999999998876 459999999999999999999999999998764
No 168
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.1e-41 Score=351.48 Aligned_cols=207 Identities=20% Similarity=0.282 Sum_probs=171.0
Q ss_pred cEEEEeEEEEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC------------ceEE
Q 005532 97 GVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN------------MKIA 164 (692)
Q Consensus 97 ~l~i~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~------------~~i~ 164 (692)
+|+++|++++|+++++|+++||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.+ ..|+
T Consensus 1 ml~~~~l~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~~i~ 80 (271)
T PRK13638 1 MLATSDLWFRYQDEPVLKGLNLDFSLSPVTGLVGANGCGKSTLFMNLSGLLRPQKGAVLWQGKPLDYSKRGLLALRQQVA 80 (271)
T ss_pred CeEEEEEEEEcCCcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCccEEEECCEEcccccCCHHHHHhheE
Confidence 3889999999998889999999999999999999999999999999999999999999998743 2499
Q ss_pred EEcccCcc-CCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHHh
Q 005532 165 FLSQEFEV-SMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLM 243 (692)
Q Consensus 165 ~v~Q~~~~-~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll 243 (692)
|++|++.. .+..|+.+|+...... . .........++.+++
T Consensus 81 ~v~q~~~~~~~~~~~~~~l~~~~~~---------------~------------------------~~~~~~~~~~~~~~l 121 (271)
T PRK13638 81 TVFQDPEQQIFYTDIDSDIAFSLRN---------------L------------------------GVPEAEITRRVDEAL 121 (271)
T ss_pred EEeeChhhccccccHHHHHHHHHHH---------------c------------------------CCCHHHHHHHHHHHH
Confidence 99999753 2455788887421100 0 000111223456778
Q ss_pred hhcCCCccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc---CCCeEEEEecCHHHHH
Q 005532 244 PELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK---QDVPMVIISHDRAFLD 320 (692)
Q Consensus 244 ~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~---~~~tvI~vsHd~~~l~ 320 (692)
+.+|+. ...++++.+||||||||++|||||+.+|+||||||||++||+.++.++.++|++ .+.|||+||||++++.
T Consensus 122 ~~~~l~-~~~~~~~~~LSgG~~qrl~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~vtH~~~~~~ 200 (271)
T PRK13638 122 TLVDAQ-HFRHQPIQCLSHGQKKRVAIAGALVLQARYLLLDEPTAGLDPAGRTQMIAIIRRIVAQGNHVIISSHDIDLIY 200 (271)
T ss_pred HHcCCH-hHhcCCchhCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 888885 466888999999999999999999999999999999999999999999888753 4789999999999999
Q ss_pred hhcCeEEEEecceEEEeccChHHH
Q 005532 321 QLCTKIVETEMGVSRTYEGNYSQY 344 (692)
Q Consensus 321 ~~~d~i~~l~~G~~~~~~G~y~~~ 344 (692)
.+||+++++++|++. ..|...++
T Consensus 201 ~~~d~i~~l~~G~i~-~~g~~~~~ 223 (271)
T PRK13638 201 EISDAVYVLRQGQIL-THGAPGEV 223 (271)
T ss_pred HhCCEEEEEECCEEE-EeCCHHHH
Confidence 999999999999974 56665443
No 169
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=8.4e-41 Score=359.01 Aligned_cols=206 Identities=26% Similarity=0.404 Sum_probs=179.2
Q ss_pred CCceEEEEeEEEEcCCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccce---------ee
Q 005532 421 GRSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL---------PN 491 (692)
Q Consensus 421 ~~~~l~~~~l~~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~~---------~~ 491 (692)
+..+|+++||+++|+++.+|+|+||+|++|+++||+||||||||||+++|+|+++|++|+|.++|.++. .+
T Consensus 38 ~~~~i~i~nl~k~y~~~~~l~~is~~i~~Gei~gLlGpNGaGKSTLl~~L~Gl~~p~~G~i~i~G~~~~~~~~~~~~~ig 117 (340)
T PRK13536 38 STVAIDLAGVSKSYGDKAVVNGLSFTVASGECFGLLGPNGAGKSTIARMILGMTSPDAGKITVLGVPVPARARLARARIG 117 (340)
T ss_pred CceeEEEEEEEEEECCEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCceEEEECCEECCcchHHHhccEE
Confidence 345799999999999989999999999999999999999999999999999999999999999987642 45
Q ss_pred eecccchhhcCCCccHHHHHHHHhccc--c----HHHHHHHHhhcCCCcccccccCCCCCHHHHHHHHHHHHhccCCcEE
Q 005532 492 YFEQNQAEALDLDKTVLETVAEAAEDW--R----IDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLL 565 (692)
Q Consensus 492 ~~~q~~~~~l~~~~tv~e~~~~~~~~~--~----~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~LAral~~~p~lL 565 (692)
|++|+ ..+.+..|+.+|+......+ . ...+.++++.+++. +..++++.+|||||||||+||+||+.+|+||
T Consensus 118 ~v~q~--~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~ll~~~~L~-~~~~~~~~~LS~G~kqrv~lA~aL~~~P~lL 194 (340)
T PRK13536 118 VVPQF--DNLDLEFTVRENLLVFGRYFGMSTREIEAVIPSLLEFARLE-SKADARVSDLSGGMKRRLTLARALINDPQLL 194 (340)
T ss_pred EEeCC--ccCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCc-hhhCCChhhCCHHHHHHHHHHHHHhcCCCEE
Confidence 66665 35667889999987532211 1 12466789999995 5678999999999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhccEEEEEECCEEEEecCChhHHHH
Q 005532 566 VLDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYYLE 630 (692)
Q Consensus 566 lLDEPTn~LD~~~~~~l~~~l~~~---~~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~~~~~ 630 (692)
||||||+|||+.++..+.++|+++ +.|||++||+++++.++||+|++|++|++. +.|..+++..
T Consensus 195 iLDEPt~gLD~~~r~~l~~~l~~l~~~g~tilisSH~l~e~~~~~d~i~il~~G~i~-~~g~~~~l~~ 261 (340)
T PRK13536 195 ILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFMEEAERLCDRLCVLEAGRKI-AEGRPHALID 261 (340)
T ss_pred EEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEE-EEcCHHHHHh
Confidence 999999999999999999999875 469999999999999999999999999998 4677777644
No 170
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8e-41 Score=351.93 Aligned_cols=209 Identities=23% Similarity=0.383 Sum_probs=175.2
Q ss_pred CcEEEEeEEEEeC-CeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC------------ce
Q 005532 96 SGVKLENISKSYK-GVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN------------MK 162 (692)
Q Consensus 96 ~~l~i~~ls~~y~-~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~------------~~ 162 (692)
++|+++|++++|+ ++++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.+ ..
T Consensus 4 ~~l~~~~l~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~~ 83 (283)
T PRK13636 4 YILKVEELNYNYSDGTHALKGININIKKGEVTAILGGNGAGKSTLFQNLNGILKPSSGRILFDGKPIDYSRKGLMKLRES 83 (283)
T ss_pred ceEEEEeEEEEeCCCCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCccEEEECCEECCCCcchHHHHHhh
Confidence 3699999999996 5679999999999999999999999999999999999999999999998743 24
Q ss_pred EEEEcccCc-cCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHH
Q 005532 163 IAFLSQEFE-VSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSK 241 (692)
Q Consensus 163 i~~v~Q~~~-~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 241 (692)
|+|++|++. ..+..|+.+|+...... ..........++..
T Consensus 84 ig~v~q~~~~~~~~~tv~e~l~~~~~~---------------------------------------~~~~~~~~~~~~~~ 124 (283)
T PRK13636 84 VGMVFQDPDNQLFSASVYQDVSFGAVN---------------------------------------LKLPEDEVRKRVDN 124 (283)
T ss_pred EEEEecCcchhhccccHHHHHHhHHHH---------------------------------------cCCCHHHHHHHHHH
Confidence 999999974 23567999998532100 00111122345677
Q ss_pred HhhhcCCCccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc----CCCeEEEEecCHH
Q 005532 242 LMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVIISHDRA 317 (692)
Q Consensus 242 ll~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~----~~~tvI~vsHd~~ 317 (692)
+++.+|+. ...++++.+||||||||++|||||+.+|+||||||||++||+.++..+.++|++ .|.|||++|||++
T Consensus 125 ~l~~~gL~-~~~~~~~~~LS~G~~qrl~laraL~~~p~lLilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvsH~~~ 203 (283)
T PRK13636 125 ALKRTGIE-HLKDKPTHCLSFGQKKRVAIAGVLVMEPKVLVLDEPTAGLDPMGVSEIMKLLVEMQKELGLTIIIATHDID 203 (283)
T ss_pred HHHHCCCh-hhhhCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHH
Confidence 88889996 577899999999999999999999999999999999999999999988877642 4899999999999
Q ss_pred HHHhhcCeEEEEecceEEEeccChHHHH
Q 005532 318 FLDQLCTKIVETEMGVSRTYEGNYSQYV 345 (692)
Q Consensus 318 ~l~~~~d~i~~l~~G~~~~~~G~y~~~~ 345 (692)
++..+||+|+++++|++ .+.|.+.++.
T Consensus 204 ~~~~~~dri~~l~~G~i-~~~g~~~~~~ 230 (283)
T PRK13636 204 IVPLYCDNVFVMKEGRV-ILQGNPKEVF 230 (283)
T ss_pred HHHHhCCEEEEEECCEE-EEeCCHHHHh
Confidence 99999999999999998 4678765543
No 171
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8e-41 Score=351.70 Aligned_cols=207 Identities=23% Similarity=0.324 Sum_probs=170.6
Q ss_pred cEEEEeEEEEeCC-----eeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC-----------
Q 005532 97 GVKLENISKSYKG-----VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN----------- 160 (692)
Q Consensus 97 ~l~i~~ls~~y~~-----~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~----------- 160 (692)
.|+++|++++|++ .++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.+
T Consensus 2 ~l~~~~l~~~~~~~~~~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~ 81 (280)
T PRK13649 2 GINLQNVSYTYQAGTPFEGRALFDVNLTIEDGSYTAFIGHTGSGKSTIMQLLNGLHVPTQGSVRVDDTLITSTSKNKDIK 81 (280)
T ss_pred eEEEEEEEEEcCCCCccccceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccCHH
Confidence 3899999999975 369999999999999999999999999999999999999999999998732
Q ss_pred ---ceEEEEcccCc-cCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHH
Q 005532 161 ---MKIAFLSQEFE-VSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLD 236 (692)
Q Consensus 161 ---~~i~~v~Q~~~-~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (692)
..|+|++|++. .++..||.+|+...... . ........
T Consensus 82 ~~~~~i~~~~q~~~~~~~~~tv~e~l~~~~~~---------------~------------------------~~~~~~~~ 122 (280)
T PRK13649 82 QIRKKVGLVFQFPESQLFEETVLKDVAFGPQN---------------F------------------------GVSQEEAE 122 (280)
T ss_pred HHHhheEEEeeChhhhhccccHHHHHHHHHHH---------------c------------------------CCCHHHHH
Confidence 24899999973 23456999998521100 0 00111223
Q ss_pred HHHHHHhhhcCCCccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc---CCCeEEEEe
Q 005532 237 AKVSKLMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK---QDVPMVIIS 313 (692)
Q Consensus 237 ~~i~~ll~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~---~~~tvI~vs 313 (692)
.++.++++.+|+.....++++.+|||||||||+|||||+.+|+||||||||++||+.+++++.+.|++ .++|||+||
T Consensus 123 ~~~~~~l~~~~l~~~~~~~~~~~LSgG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tiiivs 202 (280)
T PRK13649 123 ALAREKLALVGISESLFEKNPFELSGGQMRRVAIAGILAMEPKILVLDEPTAGLDPKGRKELMTLFKKLHQSGMTIVLVT 202 (280)
T ss_pred HHHHHHHHHcCCChhhhhCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEe
Confidence 45667788888864456888999999999999999999999999999999999999999999887753 488999999
Q ss_pred cCHHHHHhhcCeEEEEecceEEEeccChHH
Q 005532 314 HDRAFLDQLCTKIVETEMGVSRTYEGNYSQ 343 (692)
Q Consensus 314 Hd~~~l~~~~d~i~~l~~G~~~~~~G~y~~ 343 (692)
||++++..+||+|+++++|++. +.|...+
T Consensus 203 H~~~~~~~~~d~i~~l~~G~i~-~~g~~~~ 231 (280)
T PRK13649 203 HLMDDVANYADFVYVLEKGKLV-LSGKPKD 231 (280)
T ss_pred ccHHHHHHhCCEEEEEECCEEE-EeCCHHH
Confidence 9999999999999999999974 4566543
No 172
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.5e-41 Score=352.18 Aligned_cols=204 Identities=27% Similarity=0.345 Sum_probs=172.5
Q ss_pred EEEeEEEEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC--------------ceEE
Q 005532 99 KLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN--------------MKIA 164 (692)
Q Consensus 99 ~i~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~--------------~~i~ 164 (692)
.++|+++.|++.++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.. ..|+
T Consensus 26 ~~~~~~~~~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~~~~i~ 105 (269)
T cd03294 26 SKEEILKKTGQTVGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIEPTSGKVLIDGQDIAAMSRKELRELRRKKIS 105 (269)
T ss_pred hhhhhhhhcCCceEeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccChhhhhhhhcCcEE
Confidence 56799999999999999999999999999999999999999999999999999999998732 2599
Q ss_pred EEcccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHHhh
Q 005532 165 FLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMP 244 (692)
Q Consensus 165 ~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~ 244 (692)
|++|++.+++..|+.+|+...... . .........++.++++
T Consensus 106 ~v~q~~~~~~~~tv~e~l~~~~~~---------------~------------------------~~~~~~~~~~~~~~l~ 146 (269)
T cd03294 106 MVFQSFALLPHRTVLENVAFGLEV---------------Q------------------------GVPRAEREERAAEALE 146 (269)
T ss_pred EEecCcccCCCCcHHHHHHHHHHh---------------c------------------------CCCHHHHHHHHHHHHH
Confidence 999999887788999998532100 0 0001112345667888
Q ss_pred hcCCCccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc----CCCeEEEEecCHHHHH
Q 005532 245 ELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVIISHDRAFLD 320 (692)
Q Consensus 245 ~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~----~~~tvI~vsHd~~~l~ 320 (692)
.+|+. +..++++.+|||||||||+|||||+.+|+||||||||+|||+.+++++.++|.+ .|.|||++|||++++.
T Consensus 147 ~~~l~-~~~~~~~~~LS~Gq~qrv~lAral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiii~tH~~~~~~ 225 (269)
T cd03294 147 LVGLE-GWEHKYPDELSGGMQQRVGLARALAVDPDILLMDEAFSALDPLIRREMQDELLRLQAELQKTIVFITHDLDEAL 225 (269)
T ss_pred HcCCH-hHhhCCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHH
Confidence 88986 567889999999999999999999999999999999999999999999887643 3789999999999999
Q ss_pred hhcCeEEEEecceEEEeccChHH
Q 005532 321 QLCTKIVETEMGVSRTYEGNYSQ 343 (692)
Q Consensus 321 ~~~d~i~~l~~G~~~~~~G~y~~ 343 (692)
.+||+++++++|++. ..|...+
T Consensus 226 ~~~d~v~~l~~G~i~-~~g~~~~ 247 (269)
T cd03294 226 RLGDRIAIMKDGRLV-QVGTPEE 247 (269)
T ss_pred HhcCEEEEEECCEEE-EeCCHHH
Confidence 999999999999984 4565443
No 173
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.4e-41 Score=338.35 Aligned_cols=196 Identities=24% Similarity=0.371 Sum_probs=166.1
Q ss_pred EEEEeEEEEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC--------ceEEEEccc
Q 005532 98 VKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN--------MKIAFLSQE 169 (692)
Q Consensus 98 l~i~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~--------~~i~~v~Q~ 169 (692)
|+++|++++|+++.+ |+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.+ ..++|++|+
T Consensus 1 i~~~~l~~~~~~~~~--~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~gl~~~~~G~i~~~g~~~~~~~~~~~~i~~~~q~ 78 (211)
T cd03298 1 VRLDKIRFSYGEQPM--HFDLTFAQGEITAIVGPSGSGKSTLLNLIAGFETPQSGRVLINGVDVTAAPPADRPVSMLFQE 78 (211)
T ss_pred CEEEeEEEEeCCEec--ceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCcCCHhHccEEEEecc
Confidence 468999999987643 9999999999999999999999999999999999999999998743 259999999
Q ss_pred CccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHHhhhcCCC
Q 005532 170 FEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFT 249 (692)
Q Consensus 170 ~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl~ 249 (692)
+.+++..|+.||+........ . . ....+.++.++++.+|+.
T Consensus 79 ~~~~~~~tv~enl~~~~~~~~-------------~-------------------------~-~~~~~~~~~~~l~~~~l~ 119 (211)
T cd03298 79 NNLFAHLTVEQNVGLGLSPGL-------------K-------------------------L-TAEDRQAIEVALARVGLA 119 (211)
T ss_pred cccCCCCcHHHHHhccccccc-------------C-------------------------c-cHHHHHHHHHHHHHcCCH
Confidence 988778899999853211000 0 0 001134566788888986
Q ss_pred ccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc----CCCeEEEEecCHHHHHhhcCe
Q 005532 250 ADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVIISHDRAFLDQLCTK 325 (692)
Q Consensus 250 ~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~----~~~tvI~vsHd~~~l~~~~d~ 325 (692)
+..++++.+||||||||++|||||+.+|++|||||||++||+.+++++.++|++ .+.|||+||||++++..+||+
T Consensus 120 -~~~~~~~~~LS~G~~qrv~ia~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~ 198 (211)
T cd03298 120 -GLEKRLPGELSGGERQRVALARVLVRDKPVLLLDEPFAALDPALRAEMLDLVLDLHAETKMTVLMVTHQPEDAKRLAQR 198 (211)
T ss_pred -HHHhCCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhhhCE
Confidence 467888999999999999999999999999999999999999999999887753 489999999999999999999
Q ss_pred EEEEecceEE
Q 005532 326 IVETEMGVSR 335 (692)
Q Consensus 326 i~~l~~G~~~ 335 (692)
|+++++|++.
T Consensus 199 i~~l~~G~i~ 208 (211)
T cd03298 199 VVFLDNGRIA 208 (211)
T ss_pred EEEEECCEEe
Confidence 9999999874
No 174
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=8.7e-41 Score=339.06 Aligned_cols=196 Identities=28% Similarity=0.382 Sum_probs=170.2
Q ss_pred EEEEeEEEEcCCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccce---------eeeecc
Q 005532 425 VTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL---------PNYFEQ 495 (692)
Q Consensus 425 l~~~~l~~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~~---------~~~~~q 495 (692)
|+++|+++.|+++.+|+++||+|.+||++||+|+||||||||+++|+|+++|++|+|.++|.++. .+|++|
T Consensus 1 i~~~~~~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~i~~~~q 80 (220)
T cd03265 1 IEVENLVKKYGDFEAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLKPTSGRATVAGHDVVREPREVRRRIGIVFQ 80 (220)
T ss_pred CEEEEEEEEECCEEeeeceeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecCcChHHHhhcEEEecC
Confidence 57899999999889999999999999999999999999999999999999999999999886541 356666
Q ss_pred cchhhcCCCccHHHHHHHHhcc----c--cHHHHHHHHhhcCCCcccccccCCCCCHHHHHHHHHHHHhccCCcEEEEeC
Q 005532 496 NQAEALDLDKTVLETVAEAAED----W--RIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDE 569 (692)
Q Consensus 496 ~~~~~l~~~~tv~e~~~~~~~~----~--~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~LAral~~~p~lLlLDE 569 (692)
+. .+.+..|+.+++...... . ....+.++++.+++. +..++++.+|||||||||+|||||+.+|++|||||
T Consensus 81 ~~--~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LS~G~~qr~~la~al~~~p~llllDE 157 (220)
T cd03265 81 DL--SVDDELTGWENLYIHARLYGVPGAERRERIDELLDFVGLL-EAADRLVKTYSGGMRRRLEIARSLVHRPEVLFLDE 157 (220)
T ss_pred Cc--cccccCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCH-HHhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEcC
Confidence 53 456678999998754211 1 123578899999995 56789999999999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEECCEEEEecCC
Q 005532 570 PTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGD 624 (692)
Q Consensus 570 PTn~LD~~~~~~l~~~l~~~----~~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~ 624 (692)
||++||+.+++.+.+.|.++ +.|||+||||++++..+||++++|++|++... |+
T Consensus 158 Pt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~-~~ 215 (220)
T cd03265 158 PTIGLDPQTRAHVWEYIEKLKEEFGMTILLTTHYMEEAEQLCDRVAIIDHGRIIAE-GT 215 (220)
T ss_pred CccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEe-CC
Confidence 99999999999999998764 56999999999999999999999999999753 44
No 175
>COG1131 CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=7.5e-41 Score=352.53 Aligned_cols=202 Identities=31% Similarity=0.453 Sum_probs=179.0
Q ss_pred eEEEEeEEEEcC-CeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccce---------eeee
Q 005532 424 VVTIKNLEFGYE-DRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL---------PNYF 493 (692)
Q Consensus 424 ~l~~~~l~~~y~-~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~~---------~~~~ 493 (692)
+++++||++.|+ ++.+|+||||+|++|+++||+||||||||||||+|+|++.|++|+|.++|.++. .+|+
T Consensus 4 ~i~~~~l~k~~~~~~~~l~~vs~~i~~Gei~gllG~NGAGKTTllk~l~gl~~p~~G~i~i~G~~~~~~~~~~~~~igy~ 83 (293)
T COG1131 4 VIEVRNLTKKYGGDKTALDGVSFEVEPGEIFGLLGPNGAGKTTLLKILAGLLKPTSGEILVLGYDVVKEPAKVRRRIGYV 83 (293)
T ss_pred eeeecceEEEeCCCCEEEeceeEEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCceEEEEcCEeCccCHHHHHhheEEE
Confidence 578999999999 699999999999999999999999999999999999999999999999986542 4788
Q ss_pred cccchhhcCCCccHHHHHHHHhccc------cHHHHHHHHhhcCCCcccccccCCCCCHHHHHHHHHHHHhccCCcEEEE
Q 005532 494 EQNQAEALDLDKTVLETVAEAAEDW------RIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVL 567 (692)
Q Consensus 494 ~q~~~~~l~~~~tv~e~~~~~~~~~------~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~LAral~~~p~lLlL 567 (692)
+|.+ .+.+.+|+.|++......+ ....+.++++.+++.. ..++++..||+||||||.||.||+.+|+||||
T Consensus 84 ~~~~--~~~~~lT~~e~l~~~~~l~~~~~~~~~~~~~~~l~~~~L~~-~~~~~~~~lS~G~kqrl~ia~aL~~~P~lliL 160 (293)
T COG1131 84 PQEP--SLYPELTVRENLEFFARLYGLSKEEAEERIEELLELFGLED-KANKKVRTLSGGMKQRLSIALALLHDPELLIL 160 (293)
T ss_pred ccCC--CCCccccHHHHHHHHHHHhCCChhHHHHHHHHHHHHcCCch-hhCcchhhcCHHHHHHHHHHHHHhcCCCEEEE
Confidence 7764 4778999999998765432 2346889999999975 44888999999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHhc---C-ceEEEEecCHHHHHhhccEEEEEECCEEEEecCChhHHH
Q 005532 568 DEPTNHLDIPSKEMLEEAISEY---K-GTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYYL 629 (692)
Q Consensus 568 DEPTn~LD~~~~~~l~~~l~~~---~-~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~~~~ 629 (692)
||||+|||+.++..+.+.|+++ + .|||++||.++.+..+||+|++|++|++..+ |..+++.
T Consensus 161 DEPt~GLDp~~~~~~~~~l~~l~~~g~~tvlissH~l~e~~~~~d~v~il~~G~~~~~-g~~~~l~ 225 (293)
T COG1131 161 DEPTSGLDPESRREIWELLRELAKEGGVTILLSTHILEEAEELCDRVIILNDGKIIAE-GTPEELK 225 (293)
T ss_pred CCCCcCCCHHHHHHHHHHHHHHHhCCCcEEEEeCCcHHHHHHhCCEEEEEeCCEEEEe-CCHHHHH
Confidence 9999999999999999999876 3 4999999999999999999999999999854 5666543
No 176
>PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-40 Score=356.39 Aligned_cols=208 Identities=22% Similarity=0.388 Sum_probs=174.5
Q ss_pred CcEEEEeEEEEeCC----------eeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC-----
Q 005532 96 SGVKLENISKSYKG----------VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN----- 160 (692)
Q Consensus 96 ~~l~i~~ls~~y~~----------~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~----- 160 (692)
++|+++|+++.|+. .++|+||||+|++||++||+|+||||||||+++|+|+++|++|+|.++|.+
T Consensus 4 ~~l~v~nl~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~IvG~sGsGKSTLl~~l~gl~~p~~G~i~~~g~~l~~~~ 83 (327)
T PRK11308 4 PLLQAIDLKKHYPVKRGLFKPERLVKALDGVSFTLERGKTLAVVGESGCGKSTLARLLTMIETPTGGELYYQGQDLLKAD 83 (327)
T ss_pred ceEEEeeeEEEEcCCCCccccCCceeEEeeeEEEECCCCEEEEECCCCCcHHHHHHHHHcCCCCCCcEEEECCEEcCcCC
Confidence 46999999999962 469999999999999999999999999999999999999999999998732
Q ss_pred --------ceEEEEcccC--ccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhc
Q 005532 161 --------MKIAFLSQEF--EVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAV 230 (692)
Q Consensus 161 --------~~i~~v~Q~~--~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (692)
..|+|++|+| .+.+..||.+++...+.. . ...
T Consensus 84 ~~~~~~~r~~i~~v~Q~~~~~l~p~~~v~~~l~~~~~~---------------~-----------------------~~~ 125 (327)
T PRK11308 84 PEAQKLLRQKIQIVFQNPYGSLNPRKKVGQILEEPLLI---------------N-----------------------TSL 125 (327)
T ss_pred HHHHHHHhCCEEEEEcCchhhcCCccCHHHHHHHHHHH---------------c-----------------------cCC
Confidence 2599999998 466678998887421100 0 001
Q ss_pred CcccHHHHHHHHhhhcCCCccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc----CC
Q 005532 231 NLDTLDAKVSKLMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QD 306 (692)
Q Consensus 231 ~~~~~~~~i~~ll~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~----~~ 306 (692)
.......++.++|+.+|+.+...++++.+|||||+|||+|||||+.+|+|||+||||++||+.++.++.++|++ .+
T Consensus 126 ~~~~~~~~~~~~l~~~gL~~~~~~~~p~~LSgGq~QRv~iArAL~~~P~lLilDEPts~LD~~~~~~i~~lL~~l~~~~g 205 (327)
T PRK11308 126 SAAERREKALAMMAKVGLRPEHYDRYPHMFSGGQRQRIAIARALMLDPDVVVADEPVSALDVSVQAQVLNLMMDLQQELG 205 (327)
T ss_pred CHHHHHHHHHHHHHHCCCChHHhcCCCccCCHHHHHHHHHHHHHHcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHcC
Confidence 11223456778899999965567999999999999999999999999999999999999999999999887743 58
Q ss_pred CeEEEEecCHHHHHhhcCeEEEEecceEEEeccChH
Q 005532 307 VPMVIISHDRAFLDQLCTKIVETEMGVSRTYEGNYS 342 (692)
Q Consensus 307 ~tvI~vsHd~~~l~~~~d~i~~l~~G~~~~~~G~y~ 342 (692)
.|||+||||+..+..+||+|++|.+|++. ..|...
T Consensus 206 ~til~iTHdl~~~~~~adrv~vm~~G~iv-e~g~~~ 240 (327)
T PRK11308 206 LSYVFISHDLSVVEHIADEVMVMYLGRCV-EKGTKE 240 (327)
T ss_pred CEEEEEeCCHHHHHHhCCEEEEEECCEEE-EECCHH
Confidence 99999999999999999999999999985 456543
No 177
>PRK14267 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-40 Score=344.86 Aligned_cols=210 Identities=21% Similarity=0.256 Sum_probs=171.7
Q ss_pred CcEEEEeEEEEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCC-----CccEEEECCCC----------
Q 005532 96 SGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEP-----DSGNVIKAKSN---------- 160 (692)
Q Consensus 96 ~~l~i~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p-----~~G~I~~~~~~---------- 160 (692)
.+|+++|++++|+++++|+|+||+|++|++++|+||||||||||+++|+|+++| ++|+|.++|.+
T Consensus 3 ~~l~~~~l~~~~~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~ 82 (253)
T PRK14267 3 FAIETVNLRVYYGSNHVIKGVDLKIPQNGVFALMGPSGCGKSTLLRTFNRLLELNEEARVEGEVRLFGRNIYSPDVDPIE 82 (253)
T ss_pred ceEEEEeEEEEeCCeeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccChHH
Confidence 469999999999988899999999999999999999999999999999999987 49999998642
Q ss_pred --ceEEEEcccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHH
Q 005532 161 --MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAK 238 (692)
Q Consensus 161 --~~i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (692)
..|+|++|++.+++..||.+|+...... .... ........+
T Consensus 83 ~~~~i~~~~q~~~~~~~~tv~enl~~~~~~---------------~~~~----------------------~~~~~~~~~ 125 (253)
T PRK14267 83 VRREVGMVFQYPNPFPHLTIYDNVAIGVKL---------------NGLV----------------------KSKKELDER 125 (253)
T ss_pred HhhceeEEecCCccCCCCcHHHHHHHHHHh---------------cCcc----------------------CCHHHHHHH
Confidence 2599999999887788999998532100 0000 000112234
Q ss_pred HHHHhhhcCCCc---cccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc--CCCeEEEEe
Q 005532 239 VSKLMPELGFTA---DDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVIIS 313 (692)
Q Consensus 239 i~~ll~~lgl~~---~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~--~~~tvI~vs 313 (692)
+.++++.+|+.. ...++++.+|||||||||+|||||+.+|++|||||||++||+.+++++.++|++ .++|||+||
T Consensus 126 ~~~~l~~~~l~~~~~~~~~~~~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~s 205 (253)
T PRK14267 126 VEWALKKAALWDEVKDRLNDYPSNLSGGQRQRLVIARALAMKPKILLMDEPTANIDPVGTAKIEELLFELKKEYTIVLVT 205 (253)
T ss_pred HHHHHHHcCCccchhhhhccChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhhCCEEEEEE
Confidence 556667777632 245778999999999999999999999999999999999999999999888754 368999999
Q ss_pred cCHHHHHhhcCeEEEEecceEEEeccChHH
Q 005532 314 HDRAFLDQLCTKIVETEMGVSRTYEGNYSQ 343 (692)
Q Consensus 314 Hd~~~l~~~~d~i~~l~~G~~~~~~G~y~~ 343 (692)
||++++..+||+|+++++|++. ..|...+
T Consensus 206 H~~~~~~~~~d~i~~l~~G~i~-~~~~~~~ 234 (253)
T PRK14267 206 HSPAQAARVSDYVAFLYLGKLI-EVGPTRK 234 (253)
T ss_pred CCHHHHHhhCCEEEEEECCEEE-EeCCHHH
Confidence 9999999999999999999984 5566543
No 178
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-40 Score=346.16 Aligned_cols=210 Identities=26% Similarity=0.347 Sum_probs=174.5
Q ss_pred cEEEEeEEEEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC----------ceEEEE
Q 005532 97 GVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN----------MKIAFL 166 (692)
Q Consensus 97 ~l~i~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~----------~~i~~v 166 (692)
+|+++|++++|+++++|+|+||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|.. ..++|+
T Consensus 2 ~l~~~~l~~~~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~~~ 81 (255)
T PRK11231 2 TLRTENLTVGYGTKRILNDLSLSLPTGKITALIGPNGCGKSTLLKCFARLLTPQSGTVFLGDKPISMLSSRQLARRLALL 81 (255)
T ss_pred EEEEEeEEEEECCEEEEeeeeeEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCcEEEECCEEhHHCCHHHHhhheEEe
Confidence 4899999999998889999999999999999999999999999999999999999999998742 249999
Q ss_pred cccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHHhhhc
Q 005532 167 SQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPEL 246 (692)
Q Consensus 167 ~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~l 246 (692)
+|++.+++..|+.+|+......... .+. ........++.++++.+
T Consensus 82 ~q~~~~~~~~tv~~~i~~~~~~~~~----------~~~-------------------------~~~~~~~~~~~~~l~~~ 126 (255)
T PRK11231 82 PQHHLTPEGITVRELVAYGRSPWLS----------LWG-------------------------RLSAEDNARVNQAMEQT 126 (255)
T ss_pred cccCCCCCCccHHHHHHhccchhhh----------hcc-------------------------CCCHHHHHHHHHHHHHc
Confidence 9998877777999997532100000 000 00011234566778888
Q ss_pred CCCccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc---CCCeEEEEecCHHHHHhhc
Q 005532 247 GFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK---QDVPMVIISHDRAFLDQLC 323 (692)
Q Consensus 247 gl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~---~~~tvI~vsHd~~~l~~~~ 323 (692)
|+. ...++++.+|||||+|||+|||||+.+|++|||||||++||+.+++.+.++|++ .++|||++|||++++.++|
T Consensus 127 ~l~-~~~~~~~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~l~~~~~tiii~tH~~~~~~~~~ 205 (255)
T PRK11231 127 RIN-HLADRRLTDLSGGQRQRAFLAMVLAQDTPVVLLDEPTTYLDINHQVELMRLMRELNTQGKTVVTVLHDLNQASRYC 205 (255)
T ss_pred CCH-HHHcCCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHhc
Confidence 885 467888999999999999999999999999999999999999999999887743 5889999999999999999
Q ss_pred CeEEEEecceEEEeccChHH
Q 005532 324 TKIVETEMGVSRTYEGNYSQ 343 (692)
Q Consensus 324 d~i~~l~~G~~~~~~G~y~~ 343 (692)
|+|+++++|++. +.|.+++
T Consensus 206 d~i~~l~~G~i~-~~~~~~~ 224 (255)
T PRK11231 206 DHLVVLANGHVM-AQGTPEE 224 (255)
T ss_pred CEEEEEECCeEE-EEcCHHH
Confidence 999999999974 5666544
No 179
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-40 Score=344.75 Aligned_cols=208 Identities=19% Similarity=0.299 Sum_probs=169.7
Q ss_pred CcEEEEeEEEEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCC-----CCccEEEECCCC----------
Q 005532 96 SGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEE-----PDSGNVIKAKSN---------- 160 (692)
Q Consensus 96 ~~l~i~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~-----p~~G~I~~~~~~---------- 160 (692)
+.|+++|++++|+++++|+++||+|++|++++|+|+||||||||+++|+|+++ |++|+|.++|.+
T Consensus 5 ~~l~~~~l~~~~~~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~ 84 (253)
T PRK14242 5 PKMEARGLSFFYGDFQALHDISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARVEGEILLDGENIYDPHVDVVE 84 (253)
T ss_pred cEEEEeeeEEEECCeeeecceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCCceEEEECCEEccccccCHHH
Confidence 46999999999998889999999999999999999999999999999999964 589999998732
Q ss_pred --ceEEEEcccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHH
Q 005532 161 --MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAK 238 (692)
Q Consensus 161 --~~i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (692)
..|+|++|++.+++ .||.+|+...+.. ... ........+
T Consensus 85 ~~~~i~~v~q~~~~~~-~tv~enl~~~~~~---------------~~~-----------------------~~~~~~~~~ 125 (253)
T PRK14242 85 LRRRVGMVFQKPNPFP-KSIFENVAYGLRV---------------NGV-----------------------KDKAYLAER 125 (253)
T ss_pred HhhcEEEEecCCCCCc-CcHHHHHHHHHHH---------------cCC-----------------------CCHHHHHHH
Confidence 25999999987765 5999998532110 000 000012234
Q ss_pred HHHHhhhcCCCc---cccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc--CCCeEEEEe
Q 005532 239 VSKLMPELGFTA---DDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVIIS 313 (692)
Q Consensus 239 i~~ll~~lgl~~---~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~--~~~tvI~vs 313 (692)
+.++++.+|+.. ...++++.+|||||||||+|||||+.+|+||||||||++||+.+++++.++|++ .+.|||+||
T Consensus 126 ~~~~l~~~~l~~~~~~~~~~~~~~LSgGq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tvii~t 205 (253)
T PRK14242 126 VERSLRHAALWDEVKDRLHESALGLSGGQQQRLCIARALAVEPEVLLMDEPASALDPIATQKIEELIHELKARYTIIIVT 205 (253)
T ss_pred HHHHHHHcCCchhhhHHhhCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCeEEEEE
Confidence 556667777632 235778999999999999999999999999999999999999999999988753 368999999
Q ss_pred cCHHHHHhhcCeEEEEecceEEEeccChHH
Q 005532 314 HDRAFLDQLCTKIVETEMGVSRTYEGNYSQ 343 (692)
Q Consensus 314 Hd~~~l~~~~d~i~~l~~G~~~~~~G~y~~ 343 (692)
||++++..+||+|+++++|++. ..|...+
T Consensus 206 H~~~~~~~~~d~v~~l~~G~i~-~~g~~~~ 234 (253)
T PRK14242 206 HNMQQAARVSDVTAFFYMGKLI-EVGPTEQ 234 (253)
T ss_pred ecHHHHHHhCCEEEEEECCEEE-EeCCHHH
Confidence 9999999999999999999984 4565443
No 180
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=1.9e-41 Score=318.17 Aligned_cols=206 Identities=23% Similarity=0.379 Sum_probs=175.6
Q ss_pred EEEEeEEEEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCCc--------eEEEEccc
Q 005532 98 VKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSNM--------KIAFLSQE 169 (692)
Q Consensus 98 l~i~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~~--------~i~~v~Q~ 169 (692)
|.+.+|.|+|+..+. ..+++|+.||+++|+||+||||||||++|+|+..|.+|+|.++|.+. .|++++|+
T Consensus 2 l~L~~V~~~y~~~~~--~fdl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~P~~G~i~i~g~d~t~~~P~~RPVSmlFQE 79 (231)
T COG3840 2 LALDDVRFSYGHLPM--RFDLTVPAGEIVAILGPSGAGKSTLLNLIAGFETPASGEILINGVDHTASPPAERPVSMLFQE 79 (231)
T ss_pred ccccceEEeeCcceE--EEEEeecCCcEEEEECCCCccHHHHHHHHHhccCCCCceEEEcCeecCcCCcccCChhhhhhc
Confidence 678999999987653 46789999999999999999999999999999999999999998542 49999999
Q ss_pred CccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHHhhhcCCC
Q 005532 170 FEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFT 249 (692)
Q Consensus 170 ~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl~ 249 (692)
-++|..+||.+||-.+..+.++.. + .-+++++.++..+|+.
T Consensus 80 nNLFaHLtV~qNigLGl~P~LkL~--------------------------------------a-~~r~~v~~aa~~vGl~ 120 (231)
T COG3840 80 NNLFAHLTVAQNIGLGLSPGLKLN--------------------------------------A-EQREKVEAAAAQVGLA 120 (231)
T ss_pred cccchhhhhhhhhcccCCcccccC--------------------------------------H-HHHHHHHHHHHHhChh
Confidence 999999999999965443321110 0 1134667778888996
Q ss_pred ccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHH----ccCCCeEEEEecCHHHHHhhcCe
Q 005532 250 ADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYL----GKQDVPMVIISHDRAFLDQLCTK 325 (692)
Q Consensus 250 ~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L----~~~~~tvI~vsHd~~~l~~~~d~ 325 (692)
...+|.+.+|||||||||||||+|+.+-+||||||||++|||.-+..+..++ .+.+.|++||||.++.+.+++++
T Consensus 121 -~~~~RLP~~LSGGqRQRvALARclvR~~PilLLDEPFsALdP~LR~eMl~Lv~~l~~E~~~TllmVTH~~~Da~~ia~~ 199 (231)
T COG3840 121 -GFLKRLPGELSGGQRQRVALARCLVREQPILLLDEPFSALDPALRAEMLALVSQLCDERKMTLLMVTHHPEDAARIADR 199 (231)
T ss_pred -hHhhhCccccCchHHHHHHHHHHHhccCCeEEecCchhhcCHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHHhhhc
Confidence 5789999999999999999999999999999999999999999988877654 45789999999999999999999
Q ss_pred EEEEecceEEEeccChHHHHH
Q 005532 326 IVETEMGVSRTYEGNYSQYVL 346 (692)
Q Consensus 326 i~~l~~G~~~~~~G~y~~~~~ 346 (692)
++++++|++ .|.|...+++.
T Consensus 200 ~~fl~~Gri-~~~g~~~~~~~ 219 (231)
T COG3840 200 VVFLDNGRI-AAQGSTQELLS 219 (231)
T ss_pred eEEEeCCEE-EeeccHHHHhc
Confidence 999999998 67787665544
No 181
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-40 Score=342.49 Aligned_cols=205 Identities=23% Similarity=0.329 Sum_probs=167.9
Q ss_pred CcEEEEeEEEEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC-----------ceEE
Q 005532 96 SGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN-----------MKIA 164 (692)
Q Consensus 96 ~~l~i~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~-----------~~i~ 164 (692)
.+|+++|++++|+++++|+++||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.. ..++
T Consensus 4 ~~l~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~i~ 83 (237)
T PRK11614 4 VMLSFDKVSAHYGKIQALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPRATSGRIVFDGKDITDWQTAKIMREAVA 83 (237)
T ss_pred cEEEEEeEEEeeCCceeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEecCCCCHHHHHHhCEE
Confidence 46999999999998889999999999999999999999999999999999999999999998742 2499
Q ss_pred EEcccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHHhh
Q 005532 165 FLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMP 244 (692)
Q Consensus 165 ~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~ 244 (692)
|++|++.+++..||.+|+....... . .......+.++++
T Consensus 84 ~~~q~~~~~~~~tv~~~l~~~~~~~-~----------------------------------------~~~~~~~~~~~l~ 122 (237)
T PRK11614 84 IVPEGRRVFSRMTVEENLAMGGFFA-E----------------------------------------RDQFQERIKWVYE 122 (237)
T ss_pred EeccCcccCCCCcHHHHHHHhhhcc-C----------------------------------------hhHHHHHHHHHHH
Confidence 9999988877789999985321000 0 0000112223333
Q ss_pred hc-CCCccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHc---cCCCeEEEEecCHHHHH
Q 005532 245 EL-GFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG---KQDVPMVIISHDRAFLD 320 (692)
Q Consensus 245 ~l-gl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~---~~~~tvI~vsHd~~~l~ 320 (692)
.+ ++. +..++++.+|||||||||+|||||+.+|+||||||||++||+.+++.+.++|+ +.+.|||++|||++++.
T Consensus 123 ~~~~l~-~~~~~~~~~LS~G~~qrl~la~al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~ 201 (237)
T PRK11614 123 LFPRLH-ERRIQRAGTMSGGEQQMLAIGRALMSQPRLLLLDEPSLGLAPIIIQQIFDTIEQLREQGMTIFLVEQNANQAL 201 (237)
T ss_pred HHHHHH-HHHhCchhhCCHHHHHHHHHHHHHHhCCCEEEEcCccccCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHHHHH
Confidence 33 232 34466789999999999999999999999999999999999999999988764 35899999999999999
Q ss_pred hhcCeEEEEecceEEEeccChHH
Q 005532 321 QLCTKIVETEMGVSRTYEGNYSQ 343 (692)
Q Consensus 321 ~~~d~i~~l~~G~~~~~~G~y~~ 343 (692)
++||+++++++|++ .+.|...+
T Consensus 202 ~~~d~i~~l~~G~i-~~~~~~~~ 223 (237)
T PRK11614 202 KLADRGYVLENGHV-VLEDTGDA 223 (237)
T ss_pred hhCCEEEEEeCCEE-EeeCCHHH
Confidence 99999999999998 46676544
No 182
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.8e-41 Score=346.26 Aligned_cols=221 Identities=20% Similarity=0.372 Sum_probs=175.6
Q ss_pred cEEEEeEEEEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC-----------ceEEE
Q 005532 97 GVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN-----------MKIAF 165 (692)
Q Consensus 97 ~l~i~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~-----------~~i~~ 165 (692)
+|+++|+++.|+++++|+++||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|.. ..++|
T Consensus 5 ~l~~~~l~~~~~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i~~ 84 (255)
T PRK11300 5 LLSVSGLMMRFGGLLAVNNVNLEVREQEIVSLIGPNGAGKTTVFNCLTGFYKPTGGTILLRGQHIEGLPGHQIARMGVVR 84 (255)
T ss_pred eEEEeeEEEEECCEEEEEeeeeEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCcceEEECCEECCCCCHHHHHhcCeEE
Confidence 5999999999998899999999999999999999999999999999999999999999998742 24899
Q ss_pred EcccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHHhhh
Q 005532 166 LSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPE 245 (692)
Q Consensus 166 v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~ 245 (692)
++|++.+++..||.+|+......... ......+... +.. ..........+.++++.
T Consensus 85 ~~q~~~~~~~~tv~enl~~~~~~~~~-----~~~~~~~~~~----~~~---------------~~~~~~~~~~~~~~l~~ 140 (255)
T PRK11300 85 TFQHVRLFREMTVIENLLVAQHQQLK-----TGLFSGLLKT----PAF---------------RRAESEALDRAATWLER 140 (255)
T ss_pred eccCcccCCCCcHHHHHHHhhhcccc-----chhhhhhccc----ccc---------------ccchhHHHHHHHHHHHh
Confidence 99999888888999998632110000 0000000000 000 00000122456677888
Q ss_pred cCCCccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHc---c-CCCeEEEEecCHHHHHh
Q 005532 246 LGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG---K-QDVPMVIISHDRAFLDQ 321 (692)
Q Consensus 246 lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~---~-~~~tvI~vsHd~~~l~~ 321 (692)
+|+. ...++++.+|||||||||+|||||+.+|+||||||||++||+.++..+.++|. + .+.|||++||+++++..
T Consensus 141 ~gl~-~~~~~~~~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~~~tii~~sH~~~~~~~ 219 (255)
T PRK11300 141 VGLL-EHANRQAGNLAYGQQRRLEIARCMVTQPEILMLDEPAAGLNPKETKELDELIAELRNEHNVTVLLIEHDMKLVMG 219 (255)
T ss_pred CChh-hhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHhhcCCEEEEEeCCHHHHHH
Confidence 8986 56789999999999999999999999999999999999999999999988774 2 38899999999999999
Q ss_pred hcCeEEEEecceEEEeccChHH
Q 005532 322 LCTKIVETEMGVSRTYEGNYSQ 343 (692)
Q Consensus 322 ~~d~i~~l~~G~~~~~~G~y~~ 343 (692)
+||+++++++|++. +.|...+
T Consensus 220 ~~d~i~~l~~g~i~-~~~~~~~ 240 (255)
T PRK11300 220 ISDRIYVVNQGTPL-ANGTPEE 240 (255)
T ss_pred hCCEEEEEECCeEE-ecCCHHH
Confidence 99999999999984 5565443
No 183
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=7.8e-41 Score=341.70 Aligned_cols=203 Identities=23% Similarity=0.334 Sum_probs=166.8
Q ss_pred EEEEeEEEEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC-----------ceEEEE
Q 005532 98 VKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN-----------MKIAFL 166 (692)
Q Consensus 98 l~i~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~-----------~~i~~v 166 (692)
|+++|+++.|+++++|+|+||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|.. ..++|+
T Consensus 1 l~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~i~~~ 80 (230)
T TIGR03410 1 LEVSNLNVYYGQSHILRGVSLEVPKGEVTCVLGRNGVGKTTLLKTLMGLLPVKSGSIRLDGEDITKLPPHERARAGIAYV 80 (230)
T ss_pred CEEEeEEEEeCCeEEecceeeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCCHHHHHHhCeEEe
Confidence 468999999998899999999999999999999999999999999999999999999998632 259999
Q ss_pred cccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHHhhhc
Q 005532 167 SQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPEL 246 (692)
Q Consensus 167 ~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~l 246 (692)
+|++.+++..|+.+|+...+... .. .....+.++++.+
T Consensus 81 ~q~~~~~~~~tv~~~l~~~~~~~-~~-----------------------------------------~~~~~~~~~l~~~ 118 (230)
T TIGR03410 81 PQGREIFPRLTVEENLLTGLAAL-PR-----------------------------------------RSRKIPDEIYELF 118 (230)
T ss_pred ccCCcccCCCcHHHHHHHHHHhc-Cc-----------------------------------------chHHHHHHHHHHH
Confidence 99998877789999985322100 00 0001122334444
Q ss_pred CCCccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc----CCCeEEEEecCHHHHHhh
Q 005532 247 GFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVIISHDRAFLDQL 322 (692)
Q Consensus 247 gl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~----~~~tvI~vsHd~~~l~~~ 322 (692)
++.....++++.+|||||+||++|||||+.+|++|||||||++||+.+++++.++|.+ .+.|||+|||+++++..+
T Consensus 119 ~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~ 198 (230)
T TIGR03410 119 PVLKEMLGRRGGDLSGGQQQQLAIARALVTRPKLLLLDEPTEGIQPSIIKDIGRVIRRLRAEGGMAILLVEQYLDFAREL 198 (230)
T ss_pred HhHHHHhhCChhhCCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHh
Confidence 3212456788999999999999999999999999999999999999999999887753 378999999999999999
Q ss_pred cCeEEEEecceEEEeccChHH
Q 005532 323 CTKIVETEMGVSRTYEGNYSQ 343 (692)
Q Consensus 323 ~d~i~~l~~G~~~~~~G~y~~ 343 (692)
||+|+++++|++. ..|..++
T Consensus 199 ~d~v~~l~~g~i~-~~~~~~~ 218 (230)
T TIGR03410 199 ADRYYVMERGRVV-ASGAGDE 218 (230)
T ss_pred CCEEEEEECCEEE-EECCHHH
Confidence 9999999999984 5566433
No 184
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-40 Score=345.13 Aligned_cols=208 Identities=22% Similarity=0.292 Sum_probs=170.7
Q ss_pred CCcEEEEeEEEEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCC-----CccEEEECCCC---------
Q 005532 95 SSGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEP-----DSGNVIKAKSN--------- 160 (692)
Q Consensus 95 ~~~l~i~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p-----~~G~I~~~~~~--------- 160 (692)
.++|+++|+++.|+++++|+|+||+|++|++++|+|+||||||||+++|+|+++| ++|+|.++|..
T Consensus 10 ~~~l~~~~l~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 89 (258)
T PRK14268 10 QPQIKVENLNLWYGEKQALKNVSMQIPKNSVTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKVSIEGEDIYEPDVDVV 89 (258)
T ss_pred ceeEEEeeeEEEeCCeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEEEECCEEcccccchHH
Confidence 3469999999999988899999999999999999999999999999999999985 89999987632
Q ss_pred ---ceEEEEcccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHH
Q 005532 161 ---MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDA 237 (692)
Q Consensus 161 ---~~i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (692)
..++|++|++.++. .|+.+|+...... .. ........
T Consensus 90 ~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~---------------~~------------------------~~~~~~~~ 129 (258)
T PRK14268 90 ELRKNVGMVFQKPNPFP-MSIYDNVAYGPRI---------------HG------------------------ANKKDLDG 129 (258)
T ss_pred HHhhhEEEEecCCccCc-ccHHHHHHHHHHH---------------cC------------------------CCHHHHHH
Confidence 24999999988766 8999998522100 00 00011223
Q ss_pred HHHHHhhhcCCC---ccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc--CCCeEEEE
Q 005532 238 KVSKLMPELGFT---ADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVII 312 (692)
Q Consensus 238 ~i~~ll~~lgl~---~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~--~~~tvI~v 312 (692)
++.++++.+|+. ....++++.+|||||+|||+|||||+.+|+||||||||++||+.++.++.++|++ .+.|||+|
T Consensus 130 ~~~~~l~~~~l~~~~~~~~~~~~~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~tiiiv 209 (258)
T PRK14268 130 VVENALRSAALWDETSDRLKSPALSLSGGQQQRLCIARTLAVKPKIILFDEPTSALDPISTARIEDLIMNLKKDYTIVIV 209 (258)
T ss_pred HHHHHHHHcCCCcchhhhhcCChhhCCHHHHHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhhCCEEEEE
Confidence 455667777763 2346788999999999999999999999999999999999999999999887753 37899999
Q ss_pred ecCHHHHHhhcCeEEEEecceEEEeccChHH
Q 005532 313 SHDRAFLDQLCTKIVETEMGVSRTYEGNYSQ 343 (692)
Q Consensus 313 sHd~~~l~~~~d~i~~l~~G~~~~~~G~y~~ 343 (692)
|||++++..+||+|++|++|++. +.|...+
T Consensus 210 sH~~~~~~~~~d~i~~l~~G~i~-~~~~~~~ 239 (258)
T PRK14268 210 THNMQQAARISDYTGFFLMGELI-EFGQTRQ 239 (258)
T ss_pred ECCHHHHHHhCCEEEEEECCEEE-EeCCHHH
Confidence 99999999999999999999984 5565443
No 185
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=1.3e-40 Score=359.22 Aligned_cols=204 Identities=26% Similarity=0.423 Sum_probs=179.1
Q ss_pred ceEEEEeEEEEcCCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccce--------eeeec
Q 005532 423 SVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL--------PNYFE 494 (692)
Q Consensus 423 ~~l~~~~l~~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~~--------~~~~~ 494 (692)
.+|+++||+++|++..+|+++||+|++||+++|+|||||||||||++|+|+++|++|+|.++|.++. .+|++
T Consensus 3 ~~l~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~p~~G~I~i~g~~~~~~~~~~r~ig~v~ 82 (353)
T TIGR03265 3 PYLSIDNIRKRFGAFTALKDISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLERQTAGTIYQGGRDITRLPPQKRDYGIVF 82 (353)
T ss_pred cEEEEEEEEEEeCCeEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCceEEEECCEECCCCCHHHCCEEEEe
Confidence 4699999999999888999999999999999999999999999999999999999999999987652 45777
Q ss_pred ccchhhcCCCccHHHHHHHHhccc------cHHHHHHHHhhcCCCcccccccCCCCCHHHHHHHHHHHHhccCCcEEEEe
Q 005532 495 QNQAEALDLDKTVLETVAEAAEDW------RIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLD 568 (692)
Q Consensus 495 q~~~~~l~~~~tv~e~~~~~~~~~------~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~LAral~~~p~lLlLD 568 (692)
|+ ..+++.+|+.+|+....... ....+.++++.+++. +..++++.+|||||||||+|||||+.+|++||||
T Consensus 83 Q~--~~lfp~~tv~eNi~~~~~~~~~~~~~~~~~~~~~l~~l~L~-~~~~~~~~~LSgGq~QRvaLARaL~~~P~llLLD 159 (353)
T TIGR03265 83 QS--YALFPNLTVADNIAYGLKNRGMGRAEVAERVAELLDLVGLP-GSERKYPGQLSGGQQQRVALARALATSPGLLLLD 159 (353)
T ss_pred CC--cccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCC-chhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEc
Confidence 65 46778999999998654321 134578899999995 6789999999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEECCEEEEecCChhHHHH
Q 005532 569 EPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYYLE 630 (692)
Q Consensus 569 EPTn~LD~~~~~~l~~~l~~~----~~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~~~~~ 630 (692)
|||++||..+++.+.+.|++. +.|+|+||||.+++..+||+|++|++|++..+ |+.++..+
T Consensus 160 EP~s~LD~~~r~~l~~~L~~l~~~~~~tvi~vTHd~~ea~~l~d~i~vl~~G~i~~~-g~~~~~~~ 224 (353)
T TIGR03265 160 EPLSALDARVREHLRTEIRQLQRRLGVTTIMVTHDQEEALSMADRIVVMNHGVIEQV-GTPQEIYR 224 (353)
T ss_pred CCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEE-cCHHHHHh
Confidence 999999999999999988754 56999999999999999999999999999865 55544433
No 186
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-40 Score=349.21 Aligned_cols=209 Identities=22% Similarity=0.369 Sum_probs=174.6
Q ss_pred CcEEEEeEEEEeC-CeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC----------ceEE
Q 005532 96 SGVKLENISKSYK-GVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN----------MKIA 164 (692)
Q Consensus 96 ~~l~i~~ls~~y~-~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~----------~~i~ 164 (692)
.+++++|++++|+ ..++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.. ..++
T Consensus 2 ~~l~~~~l~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~ 81 (277)
T PRK13652 2 HLIETRDLCYSYSGSKEALNNINFIAPRNSRIAVIGPNGAGKSTLFRHFNGILKPTSGSVLIRGEPITKENIREVRKFVG 81 (277)
T ss_pred ceEEEEEEEEEeCCCCceeeEeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhheE
Confidence 4589999999996 4569999999999999999999999999999999999999999999998742 2499
Q ss_pred EEcccCc-cCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHHh
Q 005532 165 FLSQEFE-VSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLM 243 (692)
Q Consensus 165 ~v~Q~~~-~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll 243 (692)
|++|++. .++..||.+|+...... ...+.....+++.+++
T Consensus 82 ~v~q~~~~~~~~~tv~~~l~~~~~~---------------------------------------~~~~~~~~~~~~~~~l 122 (277)
T PRK13652 82 LVFQNPDDQIFSPTVEQDIAFGPIN---------------------------------------LGLDEETVAHRVSSAL 122 (277)
T ss_pred EEecCcccccccccHHHHHHhHHHH---------------------------------------cCCCHHHHHHHHHHHH
Confidence 9999974 33567999998421100 0011112234567788
Q ss_pred hhcCCCccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc----CCCeEEEEecCHHHH
Q 005532 244 PELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVIISHDRAFL 319 (692)
Q Consensus 244 ~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~----~~~tvI~vsHd~~~l 319 (692)
+.+|+. +..++++.+||||||||++|||||+.+|++|||||||++||+.+++.+.++|++ .+.|||++||+++++
T Consensus 123 ~~~~l~-~~~~~~~~~LS~Gq~qrl~laraL~~~p~llilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~~ 201 (277)
T PRK13652 123 HMLGLE-ELRDRVPHHLSGGEKKRVAIAGVIAMEPQVLVLDEPTAGLDPQGVKELIDFLNDLPETYGMTVIFSTHQLDLV 201 (277)
T ss_pred HHCCCh-hHhcCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHH
Confidence 888986 567889999999999999999999999999999999999999999999887743 489999999999999
Q ss_pred HhhcCeEEEEecceEEEeccChHHHH
Q 005532 320 DQLCTKIVETEMGVSRTYEGNYSQYV 345 (692)
Q Consensus 320 ~~~~d~i~~l~~G~~~~~~G~y~~~~ 345 (692)
.++||+|+++++|++ .+.|..+++.
T Consensus 202 ~~~~drv~~l~~G~i-~~~g~~~~~~ 226 (277)
T PRK13652 202 PEMADYIYVMDKGRI-VAYGTVEEIF 226 (277)
T ss_pred HHhCCEEEEEECCeE-EEECCHHHHh
Confidence 999999999999998 4667765553
No 187
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-40 Score=350.30 Aligned_cols=206 Identities=24% Similarity=0.385 Sum_probs=172.2
Q ss_pred cEEEEeEEEEeCC---eeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC----------ceE
Q 005532 97 GVKLENISKSYKG---VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN----------MKI 163 (692)
Q Consensus 97 ~l~i~~ls~~y~~---~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~----------~~i 163 (692)
+|+++|++++|++ .++|+|+||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|.. ..|
T Consensus 4 ~l~~~~l~~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~i 83 (279)
T PRK13650 4 IIEVKNLTFKYKEDQEKYTLNDVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLEAESGQIIIDGDLLTEENVWDIRHKI 83 (279)
T ss_pred eEEEEeEEEEcCCCCcCeeeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHHhhc
Confidence 5999999999974 459999999999999999999999999999999999999999999998743 258
Q ss_pred EEEcccCc-cCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHH
Q 005532 164 AFLSQEFE-VSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKL 242 (692)
Q Consensus 164 ~~v~Q~~~-~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l 242 (692)
+|++|+|. .++..||.+||...... ...+......++.++
T Consensus 84 ~~v~q~~~~~~~~~tv~eni~~~~~~---------------------------------------~~~~~~~~~~~~~~~ 124 (279)
T PRK13650 84 GMVFQNPDNQFVGATVEDDVAFGLEN---------------------------------------KGIPHEEMKERVNEA 124 (279)
T ss_pred eEEEcChHHhcccccHHHHHHhhHHh---------------------------------------CCCCHHHHHHHHHHH
Confidence 99999984 55678999998532100 001111233456778
Q ss_pred hhhcCCCccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc----CCCeEEEEecCHHH
Q 005532 243 MPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVIISHDRAF 318 (692)
Q Consensus 243 l~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~----~~~tvI~vsHd~~~ 318 (692)
++.+|+. ...++++.+|||||||||+|||||+.+|+||||||||++||+.++..+.++|++ .|+|||+||||+++
T Consensus 125 l~~~gL~-~~~~~~~~~LSgGq~qrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tilivtH~~~~ 203 (279)
T PRK13650 125 LELVGMQ-DFKEREPARLSGGQKQRVAIAGAVAMRPKIIILDEATSMLDPEGRLELIKTIKGIRDDYQMTVISITHDLDE 203 (279)
T ss_pred HHHCCCH-hHhhCCcccCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHH
Confidence 8889996 567899999999999999999999999999999999999999999999887642 48999999999999
Q ss_pred HHhhcCeEEEEecceEEEeccChHHH
Q 005532 319 LDQLCTKIVETEMGVSRTYEGNYSQY 344 (692)
Q Consensus 319 l~~~~d~i~~l~~G~~~~~~G~y~~~ 344 (692)
+. .||+|+++++|++. ..|...++
T Consensus 204 ~~-~~dri~~l~~G~i~-~~g~~~~~ 227 (279)
T PRK13650 204 VA-LSDRVLVMKNGQVE-STSTPREL 227 (279)
T ss_pred HH-hCCEEEEEECCEEE-EECCHHHH
Confidence 94 79999999999974 56765443
No 188
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-40 Score=359.60 Aligned_cols=203 Identities=28% Similarity=0.422 Sum_probs=178.3
Q ss_pred eEEEEeEEEEc-CCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccce--------eeeec
Q 005532 424 VVTIKNLEFGY-EDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL--------PNYFE 494 (692)
Q Consensus 424 ~l~~~~l~~~y-~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~~--------~~~~~ 494 (692)
+|+++|+++.| +++.+|+++||+|++||+++|+|||||||||||++|+|+.+|++|+|.++|.++. .+|++
T Consensus 3 ~l~i~~l~~~~~~~~~~l~~vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~p~~G~I~~~g~~i~~~~~~~r~ig~v~ 82 (356)
T PRK11650 3 GLKLQAVRKSYDGKTQVIKGIDLDVADGEFIVLVGPSGCGKSTLLRMVAGLERITSGEIWIGGRVVNELEPADRDIAMVF 82 (356)
T ss_pred EEEEEeEEEEeCCCCEEEeeeeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCHHHCCEEEEe
Confidence 58999999999 7788999999999999999999999999999999999999999999999987652 46777
Q ss_pred ccchhhcCCCccHHHHHHHHhcc--cc----HHHHHHHHhhcCCCcccccccCCCCCHHHHHHHHHHHHhccCCcEEEEe
Q 005532 495 QNQAEALDLDKTVLETVAEAAED--WR----IDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLD 568 (692)
Q Consensus 495 q~~~~~l~~~~tv~e~~~~~~~~--~~----~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~LAral~~~p~lLlLD 568 (692)
|+ ..+++.+||.+|+...... .. ...+.++++.+++. +..++++.+|||||||||+|||||+.+|+|||||
T Consensus 83 Q~--~~lfp~~tv~eNi~~~~~~~~~~~~~~~~~~~~~l~~~gL~-~~~~~~~~~LSgGq~QRvalARAL~~~P~llLLD 159 (356)
T PRK11650 83 QN--YALYPHMSVRENMAYGLKIRGMPKAEIEERVAEAARILELE-PLLDRKPRELSGGQRQRVAMGRAIVREPAVFLFD 159 (356)
T ss_pred CC--ccccCCCCHHHHHHhHHhhcCCCHHHHHHHHHHHHHHcCCh-hHhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 75 4677899999999865431 11 23577899999995 6789999999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEECCEEEEecCChhHHHH
Q 005532 569 EPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYYLE 630 (692)
Q Consensus 569 EPTn~LD~~~~~~l~~~l~~~----~~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~~~~~ 630 (692)
|||++||+.+++.|.+.|+++ +.|+|+||||.+++..+||+|++|++|++... |..++...
T Consensus 160 EP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~l~D~i~vl~~G~i~~~-g~~~~~~~ 224 (356)
T PRK11650 160 EPLSNLDAKLRVQMRLEIQRLHRRLKTTSLYVTHDQVEAMTLADRVVVMNGGVAEQI-GTPVEVYE 224 (356)
T ss_pred CCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEE-CCHHHHHh
Confidence 999999999999999888753 56999999999999999999999999999854 66665543
No 189
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.2e-40 Score=338.00 Aligned_cols=193 Identities=33% Similarity=0.464 Sum_probs=168.2
Q ss_pred EEEEeEEEEcCC----eecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccc-----eeeeecc
Q 005532 425 VTIKNLEFGYED----RLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNV-----LPNYFEQ 495 (692)
Q Consensus 425 l~~~~l~~~y~~----~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~-----~~~~~~q 495 (692)
|+++|+++.|++ +++|+++||+|++|+++||+||||||||||+++|+|+++|++|+|.++|.++ ..+|++|
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~i~~v~q 80 (220)
T cd03293 1 LEVRNVSKTYGGGGGAVTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLERPTSGEVLVDGEPVTGPGPDRGYVFQ 80 (220)
T ss_pred CeEEEEEEEcCCCCcceEEEeceeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECccccCcEEEEec
Confidence 478999999987 7899999999999999999999999999999999999999999999988664 2456666
Q ss_pred cchhhcCCCccHHHHHHHHhcc------ccHHHHHHHHhhcCCCcccccccCCCCCHHHHHHHHHHHHhccCCcEEEEeC
Q 005532 496 NQAEALDLDKTVLETVAEAAED------WRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDE 569 (692)
Q Consensus 496 ~~~~~l~~~~tv~e~~~~~~~~------~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~LAral~~~p~lLlLDE 569 (692)
.. .+.+..|+.+|+...... .....+.++++.+++. +..++++.+||||||||++|||||+.+|++|||||
T Consensus 81 ~~--~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LSgG~~qrl~la~al~~~p~lllLDE 157 (220)
T cd03293 81 QD--ALLPWLTVLDNVALGLELQGVPKAEARERAEELLELVGLS-GFENAYPHQLSGGMRQRVALARALAVDPDVLLLDE 157 (220)
T ss_pred cc--ccccCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCh-hhhhCCcccCCHHHHHHHHHHHHHHcCCCEEEECC
Confidence 53 455678999998754221 1124578899999995 56788999999999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEE--CCEEEE
Q 005532 570 PTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVK--GSNLQD 620 (692)
Q Consensus 570 PTn~LD~~~~~~l~~~l~~~----~~tviivSHd~~~l~~~~d~i~~l~--~g~l~~ 620 (692)
||++||+.++..+.+.|+++ +.|||+||||++++..+||++++|+ +|++..
T Consensus 158 Pt~~LD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~~~G~i~~ 214 (220)
T cd03293 158 PFSALDALTREQLQEELLDIWRETGKTVLLVTHDIDEAVFLADRVVVLSARPGRIVA 214 (220)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCCCEEEE
Confidence 99999999999999999764 4599999999999999999999999 798864
No 190
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=1.5e-40 Score=347.41 Aligned_cols=205 Identities=29% Similarity=0.377 Sum_probs=176.0
Q ss_pred CceEEEEeEEEEcCCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccce------------
Q 005532 422 RSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL------------ 489 (692)
Q Consensus 422 ~~~l~~~~l~~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~~------------ 489 (692)
..+|+++||++.|+++.+|+++||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|.++.
T Consensus 5 ~~~l~~~~l~~~~~~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~~ 84 (269)
T PRK11831 5 ANLVDMRGVSFTRGNRCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIAPDHGEILFDGENIPAMSRSRLYTVRK 84 (269)
T ss_pred cceEEEeCeEEEECCEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccChhhHHHHhh
Confidence 35799999999999889999999999999999999999999999999999999999999999886542
Q ss_pred -eeeecccchhhcCCCccHHHHHHHHhc---ccc----HHHHHHHHhhcCCCcccccccCCCCCHHHHHHHHHHHHhccC
Q 005532 490 -PNYFEQNQAEALDLDKTVLETVAEAAE---DWR----IDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKP 561 (692)
Q Consensus 490 -~~~~~q~~~~~l~~~~tv~e~~~~~~~---~~~----~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~LAral~~~ 561 (692)
.+|++|+ ..+.+..|+.+|+..... .+. ...+..+|+.+++. ...++++.+|||||||||+|||||+.+
T Consensus 85 ~i~~v~q~--~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~-~~~~~~~~~LSgGq~qrv~laral~~~ 161 (269)
T PRK11831 85 RMSMLFQS--GALFTDMNVFDNVAYPLREHTQLPAPLLHSTVMMKLEAVGLR-GAAKLMPSELSGGMARRAALARAIALE 161 (269)
T ss_pred cEEEEecc--cccCCCCCHHHHHHHHHHHccCCCHHHHHHHHHHHHHHcCCh-hhhhCChhhCCHHHHHHHHHHHHHhcC
Confidence 3466654 345567899999875321 111 12466789999995 567899999999999999999999999
Q ss_pred CcEEEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEECCEEEEecCChhHHHH
Q 005532 562 STLLVLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYYLE 630 (692)
Q Consensus 562 p~lLlLDEPTn~LD~~~~~~l~~~l~~~----~~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~~~~~ 630 (692)
|+||||||||++||+.+++.+.+.|+++ +.|||+||||++++..+||+|++|++|++.. .|..+++..
T Consensus 162 p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~~~~~~~d~v~~l~~G~i~~-~g~~~~~~~ 233 (269)
T PRK11831 162 PDLIMFDEPFVGQDPITMGVLVKLISELNSALGVTCVVVSHDVPEVLSIADHAYIVADKKIVA-HGSAQALQA 233 (269)
T ss_pred CCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhhCEEEEEECCEEEE-eCCHHHHhc
Confidence 9999999999999999999999998865 4599999999999999999999999999974 577766643
No 191
>PRK09984 phosphonate/organophosphate ester transporter subunit; Provisional
Probab=100.00 E-value=1.1e-40 Score=347.30 Aligned_cols=216 Identities=21% Similarity=0.368 Sum_probs=177.4
Q ss_pred CcEEEEeEEEEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCC---ccEEEECCCC------------
Q 005532 96 SGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPD---SGNVIKAKSN------------ 160 (692)
Q Consensus 96 ~~l~i~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~---~G~I~~~~~~------------ 160 (692)
++|+++|+++.|+++++|+++||+|++|++++|+||||||||||+++|+|+++|+ +|+|.++|..
T Consensus 3 ~~l~~~nl~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~~~~G~i~~~g~~~~~~~~~~~~~~ 82 (262)
T PRK09984 3 TIIRVEKLAKTFNQHQALHAVDLNIHHGEMVALLGPSGSGKSTLLRHLSGLITGDKSAGSHIELLGRTVQREGRLARDIR 82 (262)
T ss_pred cEEEEeeEEEEeCCeEEEecceEEEcCCcEEEEECCCCCCHHHHHHHHhccCCCCCCCceEEEECCEecccccccchhHH
Confidence 4699999999999889999999999999999999999999999999999999986 4999988742
Q ss_pred ---ceEEEEcccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHH
Q 005532 161 ---MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDA 237 (692)
Q Consensus 161 ---~~i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (692)
..++|++|++.+++..||.+|+.......... .. .... ........
T Consensus 83 ~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~----------~~--------------------~~~~-~~~~~~~~ 131 (262)
T PRK09984 83 KSRANTGYIFQQFNLVNRLSVLENVLIGALGSTPF----------WR--------------------TCFS-WFTREQKQ 131 (262)
T ss_pred HHHhheEEEccccccccCCcHHHHHHhhhcccccc----------hh--------------------hhcc-cccHHHHH
Confidence 14899999998878889999985321000000 00 0000 00012234
Q ss_pred HHHHHhhhcCCCccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc----CCCeEEEEe
Q 005532 238 KVSKLMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVIIS 313 (692)
Q Consensus 238 ~i~~ll~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~----~~~tvI~vs 313 (692)
++.++++.+|+. ...++++.+|||||||||+|||||+.+|+||||||||++||+.+++++.++|++ .|.|||+||
T Consensus 132 ~~~~~l~~~~l~-~~~~~~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~t 210 (262)
T PRK09984 132 RALQALTRVGMV-HFAHQRVSTLSGGQQQRVAIARALMQQAKVILADEPIASLDPESARIVMDTLRDINQNDGITVVVTL 210 (262)
T ss_pred HHHHHHHHcCCH-HHHhCCccccCHHHHHHHHHHHHHhcCCCEEEecCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEe
Confidence 667888899986 567889999999999999999999999999999999999999999999887753 478999999
Q ss_pred cCHHHHHhhcCeEEEEecceEEEeccChHHH
Q 005532 314 HDRAFLDQLCTKIVETEMGVSRTYEGNYSQY 344 (692)
Q Consensus 314 Hd~~~l~~~~d~i~~l~~G~~~~~~G~y~~~ 344 (692)
||++++..+||+|+++++|++ .+.|++.++
T Consensus 211 H~~~~~~~~~d~i~~l~~g~i-~~~g~~~~~ 240 (262)
T PRK09984 211 HQVDYALRYCERIVALRQGHV-FYDGSSQQF 240 (262)
T ss_pred CCHHHHHHhCCEEEEEECCEE-EEeCCHHHh
Confidence 999999999999999999998 577887653
No 192
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=1.3e-40 Score=334.84 Aligned_cols=193 Identities=28% Similarity=0.386 Sum_probs=169.9
Q ss_pred EEEEeEEEEcCCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccce--------eeeeccc
Q 005532 425 VTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL--------PNYFEQN 496 (692)
Q Consensus 425 l~~~~l~~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~~--------~~~~~q~ 496 (692)
|+++|+++.|+++++|+++||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|.++. .+|++|+
T Consensus 1 l~~~~l~~~~~~~~~l~~~~~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~i~~~~q~ 80 (208)
T cd03268 1 LKTNDLTKTYGKKRVLDDISLHVKKGEIYGFLGPNGAGKTTTMKIILGLIKPDSGEITFDGKSYQKNIEALRRIGALIEA 80 (208)
T ss_pred CEEEEEEEEECCeEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCCcccchHHHHhhEEEecCC
Confidence 47899999998889999999999999999999999999999999999999999999999987652 3466664
Q ss_pred chhhcCCCccHHHHHHHHhcc--ccHHHHHHHHhhcCCCcccccccCCCCCHHHHHHHHHHHHhccCCcEEEEeCCCCCC
Q 005532 497 QAEALDLDKTVLETVAEAAED--WRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHL 574 (692)
Q Consensus 497 ~~~~l~~~~tv~e~~~~~~~~--~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~LAral~~~p~lLlLDEPTn~L 574 (692)
. .+.+..|+.+|+...... .....+..+++.+++. ...++++.+|||||||||+|||||+.+|++|||||||++|
T Consensus 81 ~--~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LS~G~~qrv~la~al~~~p~llllDEPt~~L 157 (208)
T cd03268 81 P--GFYPNLTARENLRLLARLLGIRKKRIDEVLDVVGLK-DSAKKKVKGFSLGMKQRLGIALALLGNPDLLILDEPTNGL 157 (208)
T ss_pred C--ccCccCcHHHHHHHHHHhcCCcHHHHHHHHHHcCCH-HHHhhhHhhCCHHHHHHHHHHHHHhcCCCEEEECCCcccC
Confidence 3 466688999998764321 2345678889999995 5678899999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhccEEEEEECCEEEE
Q 005532 575 DIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKGSNLQD 620 (692)
Q Consensus 575 D~~~~~~l~~~l~~~---~~tviivSHd~~~l~~~~d~i~~l~~g~l~~ 620 (692)
|+.+++.+.+.|.++ +.|||+||||.+++..+||++++|++|++..
T Consensus 158 D~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~g~i~~ 206 (208)
T cd03268 158 DPDGIKELRELILSLRDQGITVLISSHLLSEIQKVADRIGIINKGKLIE 206 (208)
T ss_pred CHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHHhcCEEEEEECCEEEe
Confidence 999999999999865 4699999999999999999999999999863
No 193
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-40 Score=358.52 Aligned_cols=204 Identities=27% Similarity=0.441 Sum_probs=179.0
Q ss_pred CceEEEEeEEEEcCCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccc--------eeeee
Q 005532 422 RSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNV--------LPNYF 493 (692)
Q Consensus 422 ~~~l~~~~l~~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~--------~~~~~ 493 (692)
+++|+++||++.|++..+|+++||+|++||+++|+|||||||||||++|+|+++|++|+|.++|.++ ..+|+
T Consensus 4 ~~~l~~~~l~~~~~~~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~~r~ig~v 83 (351)
T PRK11432 4 KNFVVLKNITKRFGSNTVIDNLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEKPTEGQIFIDGEDVTHRSIQQRDICMV 83 (351)
T ss_pred CcEEEEEeEEEEECCeEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCHHHCCEEEE
Confidence 4579999999999988899999999999999999999999999999999999999999999998765 23577
Q ss_pred cccchhhcCCCccHHHHHHHHhcc------ccHHHHHHHHhhcCCCcccccccCCCCCHHHHHHHHHHHHhccCCcEEEE
Q 005532 494 EQNQAEALDLDKTVLETVAEAAED------WRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVL 567 (692)
Q Consensus 494 ~q~~~~~l~~~~tv~e~~~~~~~~------~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~LAral~~~p~lLlL 567 (692)
+|+ ..+++.+|+.+|+...... .....+.++++.+++. +..++++.+|||||||||+|||||+.+|+||||
T Consensus 84 fQ~--~~lfp~~tv~eNi~~~l~~~~~~~~~~~~~v~~~l~~~gl~-~~~~r~~~~LSgGq~QRVaLARaL~~~P~lLLL 160 (351)
T PRK11432 84 FQS--YALFPHMSLGENVGYGLKMLGVPKEERKQRVKEALELVDLA-GFEDRYVDQISGGQQQRVALARALILKPKVLLF 160 (351)
T ss_pred eCC--cccCCCCCHHHHHHHHHhHcCCCHHHHHHHHHHHHHHcCCc-hhhcCChhhCCHHHHHHHHHHHHHHcCCCEEEE
Confidence 765 4678899999999875321 1124678899999995 678999999999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEECCEEEEecCChhHHH
Q 005532 568 DEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYYL 629 (692)
Q Consensus 568 DEPTn~LD~~~~~~l~~~l~~~----~~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~~~~ 629 (692)
||||++||+.+++.+.+.|+++ +.|+|+||||.+++..+||+|++|++|++... |..++..
T Consensus 161 DEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~e~~~laD~i~vm~~G~i~~~-g~~~~~~ 225 (351)
T PRK11432 161 DEPLSNLDANLRRSMREKIRELQQQFNITSLYVTHDQSEAFAVSDTVIVMNKGKIMQI-GSPQELY 225 (351)
T ss_pred cCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEE-cCHHHHH
Confidence 9999999999999999988754 56999999999999999999999999999864 6655543
No 194
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-40 Score=351.47 Aligned_cols=208 Identities=21% Similarity=0.283 Sum_probs=170.1
Q ss_pred CcEEEEeEEEEeCCe-----eceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC----------
Q 005532 96 SGVKLENISKSYKGV-----TVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN---------- 160 (692)
Q Consensus 96 ~~l~i~~ls~~y~~~-----~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~---------- 160 (692)
..|+++|++++|+++ ++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|..
T Consensus 5 ~~l~i~nl~~~~~~~~~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~ 84 (289)
T PRK13645 5 KDIILDNVSYTYAKKTPFEFKALNNTSLTFKKNKVTCVIGTTGSGKSTMIQLTNGLIISETGQTIVGDYAIPANLKKIKE 84 (289)
T ss_pred ceEEEEEEEEEeCCCCccccceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEcccccccccc
Confidence 359999999999764 49999999999999999999999999999999999999999999987632
Q ss_pred -----ceEEEEcccCcc-CCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCccc
Q 005532 161 -----MKIAFLSQEFEV-SMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDT 234 (692)
Q Consensus 161 -----~~i~~v~Q~~~~-~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (692)
..|+|++|++.. .+..|+.+|+...... . ......
T Consensus 85 ~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~---------------~------------------------~~~~~~ 125 (289)
T PRK13645 85 VKRLRKEIGLVFQFPEYQLFQETIEKDIAFGPVN---------------L------------------------GENKQE 125 (289)
T ss_pred HHHHhccEEEEEeCcchhhhhhHHHHHHHHHHHH---------------c------------------------CCCHHH
Confidence 248999999742 2346999998521100 0 000011
Q ss_pred HHHHHHHHhhhcCCCccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc----CCCeEE
Q 005532 235 LDAKVSKLMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMV 310 (692)
Q Consensus 235 ~~~~i~~ll~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~----~~~tvI 310 (692)
...++.++++.++++....++++.+|||||||||+|||||+.+|+||||||||++||+.+++++.++|++ .++|||
T Consensus 126 ~~~~~~~ll~~~~L~~~~~~~~~~~LS~Gq~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii 205 (289)
T PRK13645 126 AYKKVPELLKLVQLPEDYVKRSPFELSGGQKRRVALAGIIAMDGNTLVLDEPTGGLDPKGEEDFINLFERLNKEYKKRII 205 (289)
T ss_pred HHHHHHHHHHHcCCChhHhcCChhhCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEE
Confidence 2234567788888854567889999999999999999999999999999999999999999999887642 488999
Q ss_pred EEecCHHHHHhhcCeEEEEecceEEEeccChHH
Q 005532 311 IISHDRAFLDQLCTKIVETEMGVSRTYEGNYSQ 343 (692)
Q Consensus 311 ~vsHd~~~l~~~~d~i~~l~~G~~~~~~G~y~~ 343 (692)
+||||++++..+||+|+++++|++. +.|...+
T Consensus 206 iisH~~~~~~~~~d~i~~l~~G~i~-~~g~~~~ 237 (289)
T PRK13645 206 MVTHNMDQVLRIADEVIVMHEGKVI-SIGSPFE 237 (289)
T ss_pred EEecCHHHHHHhCCEEEEEECCEEE-EeCCHHH
Confidence 9999999999999999999999974 4566543
No 195
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.9e-40 Score=343.99 Aligned_cols=209 Identities=22% Similarity=0.297 Sum_probs=169.7
Q ss_pred CCcEEEEeEEEEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCC-----CccEEEECCCC---------
Q 005532 95 SSGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEP-----DSGNVIKAKSN--------- 160 (692)
Q Consensus 95 ~~~l~i~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p-----~~G~I~~~~~~--------- 160 (692)
.++|+++|++++|++.++|+|+||+|++|++++|+|+||||||||+++|+|+++| ++|+|.++|.+
T Consensus 5 ~~~l~~~~l~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 84 (254)
T PRK14273 5 EAIIETENLNLFYTDFKALNNINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEGKNIYSNNFDIL 84 (254)
T ss_pred CceEEEeeeEEEeCCceeecceeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECCEecccccccHH
Confidence 3469999999999888899999999999999999999999999999999999987 48999997632
Q ss_pred ---ceEEEEcccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHH
Q 005532 161 ---MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDA 237 (692)
Q Consensus 161 ---~~i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (692)
..|+|++|++.++ ..||+||+....... . .........
T Consensus 85 ~~~~~i~~v~q~~~~~-~~tv~eni~~~~~~~---------------~-----------------------~~~~~~~~~ 125 (254)
T PRK14273 85 ELRRKIGMVFQTPNPF-LMSIYDNISYGPKIH---------------G-----------------------TKDKKKLDE 125 (254)
T ss_pred HHhhceEEEeeccccc-cCcHHHHHHHHHHhc---------------C-----------------------CCCHHHHHH
Confidence 2499999998876 589999985321000 0 000011223
Q ss_pred HHHHHhhhcCCC---ccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc--CCCeEEEE
Q 005532 238 KVSKLMPELGFT---ADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVII 312 (692)
Q Consensus 238 ~i~~ll~~lgl~---~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~--~~~tvI~v 312 (692)
++.++++.+|+. ....++++.+|||||||||+|||||+.+|+||||||||++||+.++.++.++|++ .+.|||+|
T Consensus 126 ~~~~~l~~~~l~~~l~~~~~~~~~~LSgG~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tvii~ 205 (254)
T PRK14273 126 IVEQSLKKSALWNEVKDKLNTNALSLSGGQQQRLCIARTLAIEPNVILMDEPTSALDPISTGKIEELIINLKESYTIIIV 205 (254)
T ss_pred HHHHHHHHhCCchhhHHHHhCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhcCCEEEEE
Confidence 445556666652 1345778999999999999999999999999999999999999999999887754 36899999
Q ss_pred ecCHHHHHhhcCeEEEEecceEEEeccChHH
Q 005532 313 SHDRAFLDQLCTKIVETEMGVSRTYEGNYSQ 343 (692)
Q Consensus 313 sHd~~~l~~~~d~i~~l~~G~~~~~~G~y~~ 343 (692)
||+++++..+||+|++|++|++. ..|...+
T Consensus 206 sH~~~~~~~~~d~i~~l~~G~i~-~~g~~~~ 235 (254)
T PRK14273 206 THNMQQAGRISDRTAFFLNGCIE-EESSTDE 235 (254)
T ss_pred eCCHHHHHHhCCEEEEEECCEEE-EeCCHHH
Confidence 99999999999999999999984 4565443
No 196
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.6e-40 Score=341.40 Aligned_cols=201 Identities=28% Similarity=0.449 Sum_probs=173.0
Q ss_pred eEEEEeEEEEcCCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccce--------eeeecc
Q 005532 424 VVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL--------PNYFEQ 495 (692)
Q Consensus 424 ~l~~~~l~~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~~--------~~~~~q 495 (692)
+|+++||++.|+++.+|+++||+|++|+++||+||||||||||+++|+|+++|++|+|.++|.++. .+|++|
T Consensus 2 ~l~~~~l~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~i~~v~q 81 (239)
T cd03296 2 SIEVRNVSKRFGDFVALDDVSLDIPSGELVALLGPSGSGKTTLLRLIAGLERPDSGTILFGGEDATDVPVQERNVGFVFQ 81 (239)
T ss_pred EEEEEeEEEEECCEEeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCccccceEEEec
Confidence 489999999999889999999999999999999999999999999999999999999999886541 356666
Q ss_pred cchhhcCCCccHHHHHHHHhcc--------cc--HHHHHHHHhhcCCCcccccccCCCCCHHHHHHHHHHHHhccCCcEE
Q 005532 496 NQAEALDLDKTVLETVAEAAED--------WR--IDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLL 565 (692)
Q Consensus 496 ~~~~~l~~~~tv~e~~~~~~~~--------~~--~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~LAral~~~p~lL 565 (692)
++ .+.+..|+.+|+...... +. ...+..+++.+++. ...++++.+|||||||||+|||||+.+|+||
T Consensus 82 ~~--~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LS~G~~qrl~la~al~~~p~ll 158 (239)
T cd03296 82 HY--ALFRHMTVFDNVAFGLRVKPRSERPPEAEIRAKVHELLKLVQLD-WLADRYPAQLSGGQRQRVALARALAVEPKVL 158 (239)
T ss_pred CC--cccCCCCHHHHHhhhhhhccccccCCHHHHHHHHHHHHHHcCCh-hhhhcChhhCCHHHHHHHHHHHHHhcCCCEE
Confidence 43 455678999998754211 11 23467889999995 5678899999999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEECCEEEEecCChhHH
Q 005532 566 VLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYY 628 (692)
Q Consensus 566 lLDEPTn~LD~~~~~~l~~~l~~~----~~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~~~ 628 (692)
||||||++||+.+++.+.+.|.++ +.|||+||||++++..+||+|++|++|++.. .|..+++
T Consensus 159 llDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~-~~~~~~~ 224 (239)
T cd03296 159 LLDEPFGALDAKVRKELRRWLRRLHDELHVTTVFVTHDQEEALEVADRVVVMNKGRIEQ-VGTPDEV 224 (239)
T ss_pred EEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEE-ecCHHHH
Confidence 999999999999999999999865 4599999999999999999999999999974 4665544
No 197
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-40 Score=347.79 Aligned_cols=210 Identities=26% Similarity=0.368 Sum_probs=174.0
Q ss_pred CcEEEEeEEEEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC----------ceEEE
Q 005532 96 SGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN----------MKIAF 165 (692)
Q Consensus 96 ~~l~i~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~----------~~i~~ 165 (692)
.+|+++|++++|+++++|+|+||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|.+ ..|+|
T Consensus 10 ~~l~i~~l~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 89 (265)
T PRK10575 10 TTFALRNVSFRVPGRTLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQPPSEGEILLDAQPLESWSSKAFARKVAY 89 (265)
T ss_pred ceEEEeeEEEEECCEEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEehhhCCHHHHhhheEE
Confidence 46999999999998889999999999999999999999999999999999999999999998743 25999
Q ss_pred EcccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHHhhh
Q 005532 166 LSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPE 245 (692)
Q Consensus 166 v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~ 245 (692)
++|++.+++..|+.+|+........ ..+. ........++.++++.
T Consensus 90 v~q~~~~~~~~tv~e~l~~~~~~~~----------~~~~-------------------------~~~~~~~~~~~~~l~~ 134 (265)
T PRK10575 90 LPQQLPAAEGMTVRELVAIGRYPWH----------GALG-------------------------RFGAADREKVEEAISL 134 (265)
T ss_pred eccCCCCCCCccHHHHHHhCccccc----------cccc-------------------------CCCHHHHHHHHHHHHH
Confidence 9999877778899999853210000 0000 0001123456678888
Q ss_pred cCCCccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc----CCCeEEEEecCHHHHHh
Q 005532 246 LGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVIISHDRAFLDQ 321 (692)
Q Consensus 246 lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~----~~~tvI~vsHd~~~l~~ 321 (692)
+|+. ...++++.+|||||||||+|||||+.+|+||||||||++||+.+++.+.++|.+ .+.|||+|||+++++..
T Consensus 135 ~~l~-~~~~~~~~~LSgG~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~l~~~~~~tiii~sH~~~~i~~ 213 (265)
T PRK10575 135 VGLK-PLAHRLVDSLSGGERQRAWIAMLVAQDSRCLLLDEPTSALDIAHQVDVLALVHRLSQERGLTVIAVLHDINMAAR 213 (265)
T ss_pred cCCH-HHhcCCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHH
Confidence 8885 467888999999999999999999999999999999999999999988877642 48999999999999999
Q ss_pred hcCeEEEEecceEEEeccChH
Q 005532 322 LCTKIVETEMGVSRTYEGNYS 342 (692)
Q Consensus 322 ~~d~i~~l~~G~~~~~~G~y~ 342 (692)
+||+|+++++|++ ...|...
T Consensus 214 ~~d~i~~l~~G~i-~~~~~~~ 233 (265)
T PRK10575 214 YCDYLVALRGGEM-IAQGTPA 233 (265)
T ss_pred hCCEEEEEECCeE-EEecCHH
Confidence 9999999999997 3556543
No 198
>TIGR03873 F420-0_ABC_ATP proposed F420-0 ABC transporter, ATP-binding protein. This small clade of ABC-type transporter ATP-binding protein components is found as a three gene cassette along with a periplasmic substrate-binding protein (TIGR03868) and a permease (TIGR03869). The organisms containing this cassette are all Actinobacteria and all contain numerous genes requiring the coenzyme F420. This model was defined based on five such organisms, four of which are lacking all F420 biosynthetic capability save the final side-chain polyglutamate attachment step (via the gene cofE: TIGR01916). In Jonesia denitrificans DSM 20603 and marine actinobacterium PHSC20C1 this cassette is in an apparent operon with the cofE gene and, in PHSC20C1, also with a F420-dependent glucose-6-phosphate dehydrogenase (TIGR03554). Based on these observations we propose that this ATP-binding protein is a component of an F420-0 (that is, F420 lacking only the polyglutamate tail) transporter.
Probab=100.00 E-value=1.5e-40 Score=345.03 Aligned_cols=209 Identities=29% Similarity=0.393 Sum_probs=174.5
Q ss_pred EEEEeEEEEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC----------ceEEEEc
Q 005532 98 VKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN----------MKIAFLS 167 (692)
Q Consensus 98 l~i~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~----------~~i~~v~ 167 (692)
|+++|+++.|+++++|+|+||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|.+ ..++|++
T Consensus 2 l~~~~l~~~~~~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~~~ 81 (256)
T TIGR03873 2 LRLSRVSWSAGGRLIVDGVDVTAPPGSLTGLLGPNGSGKSTLLRLLAGALRPDAGTVDLAGVDLHGLSRRARARRVALVE 81 (256)
T ss_pred ceEEeEEEEECCEEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEEcccCCHHHHhhheEEec
Confidence 789999999998899999999999999999999999999999999999999999999998742 2499999
Q ss_pred ccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHHhhhcC
Q 005532 168 QEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELG 247 (692)
Q Consensus 168 Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lg 247 (692)
|++.+++..||.+|+......... +. .........++.++++.+|
T Consensus 82 q~~~~~~~~tv~e~l~~~~~~~~~-----------~~------------------------~~~~~~~~~~~~~~l~~~~ 126 (256)
T TIGR03873 82 QDSDTAVPLTVRDVVALGRIPHRS-----------LW------------------------AGDSPHDAAVVDRALARTE 126 (256)
T ss_pred ccCccCCCCCHHHHHHhcchhhhh-----------hc------------------------cCCCHHHHHHHHHHHHHcC
Confidence 998777788999998532100000 00 0001112245667888888
Q ss_pred CCccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc---CCCeEEEEecCHHHHHhhcC
Q 005532 248 FTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK---QDVPMVIISHDRAFLDQLCT 324 (692)
Q Consensus 248 l~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~---~~~tvI~vsHd~~~l~~~~d 324 (692)
+. +..++++.+|||||||||+|||||+.+|+||||||||++||+.++.++.++|++ .+.|||++|||++++..+||
T Consensus 127 l~-~~~~~~~~~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d 205 (256)
T TIGR03873 127 LS-HLADRDMSTLSGGERQRVHVARALAQEPKLLLLDEPTNHLDVRAQLETLALVRELAATGVTVVAALHDLNLAASYCD 205 (256)
T ss_pred cH-hhhcCCcccCCHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCC
Confidence 85 577899999999999999999999999999999999999999999999887753 47899999999999999999
Q ss_pred eEEEEecceEEEeccChHH
Q 005532 325 KIVETEMGVSRTYEGNYSQ 343 (692)
Q Consensus 325 ~i~~l~~G~~~~~~G~y~~ 343 (692)
+|+++++|++. ..|...+
T Consensus 206 ~i~~l~~G~i~-~~g~~~~ 223 (256)
T TIGR03873 206 HVVVLDGGRVV-AAGPPRE 223 (256)
T ss_pred EEEEEeCCCEE-EecCHHH
Confidence 99999999974 5676543
No 199
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=1.4e-40 Score=335.74 Aligned_cols=194 Identities=27% Similarity=0.473 Sum_probs=169.0
Q ss_pred EEEEeEEEEcCCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccce--------eeeeccc
Q 005532 425 VTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL--------PNYFEQN 496 (692)
Q Consensus 425 l~~~~l~~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~~--------~~~~~q~ 496 (692)
|+++|+++.|+++++|+++||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.++. .+|++|.
T Consensus 1 i~~~~l~~~~~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~v~~~g~~~~~~~~~~~~i~~~~q~ 80 (213)
T cd03301 1 VELENVTKRFGNVTALDDLNLDIADGEFVVLLGPSGCGKTTTLRMIAGLEEPTSGRIYIGGRDVTDLPPKDRDIAMVFQN 80 (213)
T ss_pred CEEEeeEEEECCeeeeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCcccceEEEEecC
Confidence 47899999999889999999999999999999999999999999999999999999999886542 3566664
Q ss_pred chhhcCCCccHHHHHHHHhcc--cc----HHHHHHHHhhcCCCcccccccCCCCCHHHHHHHHHHHHhccCCcEEEEeCC
Q 005532 497 QAEALDLDKTVLETVAEAAED--WR----IDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEP 570 (692)
Q Consensus 497 ~~~~l~~~~tv~e~~~~~~~~--~~----~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~LAral~~~p~lLlLDEP 570 (692)
. .+.+..|+.+|+...... .. ...+.++++.+|+. ...++++.+||||||||++|||||+.+|++||||||
T Consensus 81 ~--~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LS~G~~qr~~laral~~~p~llllDEP 157 (213)
T cd03301 81 Y--ALYPHMTVYDNIAFGLKLRKVPKDEIDERVREVAELLQIE-HLLDRKPKQLSGGQRQRVALGRAIVREPKVFLMDEP 157 (213)
T ss_pred h--hhccCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCH-HHHhCChhhCCHHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 3 455678999998754211 11 23467889999995 567899999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEECCEEEEe
Q 005532 571 TNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDY 621 (692)
Q Consensus 571 Tn~LD~~~~~~l~~~l~~~----~~tviivSHd~~~l~~~~d~i~~l~~g~l~~~ 621 (692)
|++||+.+++.+.+.|+++ +.|||+||||++++..+||+|++|++|+++.+
T Consensus 158 t~~LD~~~~~~l~~~l~~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~g~~~~~ 212 (213)
T cd03301 158 LSNLDAKLRVQMRAELKRLQQRLGTTTIYVTHDQVEAMTMADRIAVMNDGQIQQI 212 (213)
T ss_pred cccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEEEec
Confidence 9999999999999999764 46999999999999999999999999999754
No 200
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=1.5e-40 Score=336.77 Aligned_cols=194 Identities=26% Similarity=0.402 Sum_probs=169.5
Q ss_pred eEEEEeEEEEcCCe----ecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccce---------e
Q 005532 424 VVTIKNLEFGYEDR----LLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL---------P 490 (692)
Q Consensus 424 ~l~~~~l~~~y~~~----~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~~---------~ 490 (692)
+|+++|+++.|+++ ++|+++||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|.++. .
T Consensus 1 ~l~~~~v~~~~~~~~~~~~il~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~i 80 (218)
T cd03266 1 MITADALTKRFRDVKKTVQAVDGVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLEPDAGFATVDGFDVVKEPAEARRRL 80 (218)
T ss_pred CeEEEEEEEecCCCCccceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEEcccCHHHHHhhE
Confidence 47899999999876 7999999999999999999999999999999999999999999999886542 3
Q ss_pred eeecccchhhcCCCccHHHHHHHHhcc------ccHHHHHHHHhhcCCCcccccccCCCCCHHHHHHHHHHHHhccCCcE
Q 005532 491 NYFEQNQAEALDLDKTVLETVAEAAED------WRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTL 564 (692)
Q Consensus 491 ~~~~q~~~~~l~~~~tv~e~~~~~~~~------~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~LAral~~~p~l 564 (692)
+|++|+. .+++..|+.+|+...... .....+.++++.+|+. +..++++.+|||||||||+|||||+.+|++
T Consensus 81 ~~~~q~~--~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LS~G~~qrv~laral~~~p~i 157 (218)
T cd03266 81 GFVSDST--GLYDRLTARENLEYFAGLYGLKGDELTARLEELADRLGME-ELLDRRVGGFSTGMRQKVAIARALVHDPPV 157 (218)
T ss_pred EEecCCc--ccCcCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCH-HHHhhhhhhcCHHHHHHHHHHHHHhcCCCE
Confidence 4566553 456678999998653221 1123577899999995 567899999999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhccEEEEEECCEEEE
Q 005532 565 LVLDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKGSNLQD 620 (692)
Q Consensus 565 LlLDEPTn~LD~~~~~~l~~~l~~~---~~tviivSHd~~~l~~~~d~i~~l~~g~l~~ 620 (692)
|||||||++||+.+++.+.+.|.++ +.|||+||||.+++..+||++++|++|++..
T Consensus 158 lllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~i~~ 216 (218)
T cd03266 158 LLLDEPTTGLDVMATRALREFIRQLRALGKCILFSTHIMQEVERLCDRVVVLHRGRVVY 216 (218)
T ss_pred EEEcCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhcCEEEEEECCEEee
Confidence 9999999999999999999999876 4599999999999999999999999999874
No 201
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2e-40 Score=341.03 Aligned_cols=200 Identities=27% Similarity=0.390 Sum_probs=171.8
Q ss_pred EEEEeEEEEcCC-eecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccce-------------e
Q 005532 425 VTIKNLEFGYED-RLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL-------------P 490 (692)
Q Consensus 425 l~~~~l~~~y~~-~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~~-------------~ 490 (692)
|+++||++.|++ +.+|+++||+|.+|+++||+||||||||||+++|+|+++|++|+|.++|.++. .
T Consensus 1 l~~~~l~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~i 80 (241)
T cd03256 1 IEVENLSKTYPNGKKALKDVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVEPTSGSVLIDGTDINKLKGKALRQLRRQI 80 (241)
T ss_pred CEEeeEEEecCCccEEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEeccccCHhHHHHHHhcc
Confidence 478999999987 78999999999999999999999999999999999999999999999886542 2
Q ss_pred eeecccchhhcCCCccHHHHHHHHhc--------------cccHHHHHHHHhhcCCCcccccccCCCCCHHHHHHHHHHH
Q 005532 491 NYFEQNQAEALDLDKTVLETVAEAAE--------------DWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCK 556 (692)
Q Consensus 491 ~~~~q~~~~~l~~~~tv~e~~~~~~~--------------~~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~LAr 556 (692)
+|++|+ ..+++..|+.+|+..... ......+.++++.+++. ...++++.+|||||||||+|||
T Consensus 81 ~~~~q~--~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LS~G~~qrv~la~ 157 (241)
T cd03256 81 GMIFQQ--FNLIERLSVLENVLSGRLGRRSTWRSLFGLFPKEEKQRALAALERVGLL-DKAYQRADQLSGGQQQRVAIAR 157 (241)
T ss_pred EEEccc--CcccccCcHHHHHHhhhcccchhhhhhcccCcHHHHHHHHHHHHHcCCh-hhhCCCcccCCHHHHHHHHHHH
Confidence 455554 345567899999864321 11123577889999995 5678899999999999999999
Q ss_pred HhccCCcEEEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEECCEEEEecCChhHH
Q 005532 557 FMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYY 628 (692)
Q Consensus 557 al~~~p~lLlLDEPTn~LD~~~~~~l~~~l~~~----~~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~~~ 628 (692)
||+.+|+||||||||++||+.+++.+.+.|+++ +.|||+||||++++..+||++++|++|++.. .|..+++
T Consensus 158 al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~G~i~~-~~~~~~~ 232 (241)
T cd03256 158 ALMQQPKLILADEPVASLDPASSRQVMDLLKRINREEGITVIVSLHQVDLAREYADRIVGLKDGRIVF-DGPPAEL 232 (241)
T ss_pred HHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEe-ecCHHHh
Confidence 999999999999999999999999999999864 4699999999999999999999999999974 4776665
No 202
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=1.6e-40 Score=340.62 Aligned_cols=200 Identities=30% Similarity=0.430 Sum_probs=171.9
Q ss_pred EEEEeEEEEcCCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccce-----------eeee
Q 005532 425 VTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL-----------PNYF 493 (692)
Q Consensus 425 l~~~~l~~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~~-----------~~~~ 493 (692)
|+++|+++.|+++.+|+++||+|++|+++||+||||||||||+++|+|+++|++|+|.++|.++. .+|+
T Consensus 1 l~~~~l~~~~~~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i~~v 80 (236)
T cd03219 1 LEVRGLTKRFGGLVALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLRPTSGSVLFDGEDITGLPPHEIARLGIGRT 80 (236)
T ss_pred CeeeeeEEEECCEEEecCceEEecCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEECCCCCHHHHHhcCEEEE
Confidence 46899999999888999999999999999999999999999999999999999999999886531 3455
Q ss_pred cccchhhcCCCccHHHHHHHHhccc----------------cHHHHHHHHhhcCCCcccccccCCCCCHHHHHHHHHHHH
Q 005532 494 EQNQAEALDLDKTVLETVAEAAEDW----------------RIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKF 557 (692)
Q Consensus 494 ~q~~~~~l~~~~tv~e~~~~~~~~~----------------~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~LAra 557 (692)
+|+ ..+.+..|+.+|+....... ....+.++++.+|+. ...++++.+|||||||||+||||
T Consensus 81 ~q~--~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LSgG~~qrv~la~a 157 (236)
T cd03219 81 FQI--PRLFPELTVLENVMVAAQARTGSGLLLARARREEREARERAEELLERVGLA-DLADRPAGELSYGQQRRLEIARA 157 (236)
T ss_pred ecc--cccccCCCHHHHHHHHHhhccccccccccccccHHHHHHHHHHHHHHcCcc-chhhCChhhCCHHHHHHHHHHHH
Confidence 654 34667789999987542110 122467889999995 56789999999999999999999
Q ss_pred hccCCcEEEEeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhccEEEEEECCEEEEecCChhHH
Q 005532 558 MVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYY 628 (692)
Q Consensus 558 l~~~p~lLlLDEPTn~LD~~~~~~l~~~l~~~---~~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~~~ 628 (692)
|+.+|++|||||||++||+.++..+.+.|+++ +.|||+||||++++..+||+|++|++|++.. .|+.+++
T Consensus 158 l~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i~~-~~~~~~~ 230 (236)
T cd03219 158 LATDPKLLLLDEPAAGLNPEETEELAELIRELRERGITVLLVEHDMDVVMSLADRVTVLDQGRVIA-EGTPDEV 230 (236)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEeCCEEEe-ecCHHHh
Confidence 99999999999999999999999999999865 3599999999999999999999999999974 4665544
No 203
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=1.5e-40 Score=342.31 Aligned_cols=201 Identities=28% Similarity=0.405 Sum_probs=172.6
Q ss_pred eEEEEeEEEEcC-CeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccce-------------
Q 005532 424 VVTIKNLEFGYE-DRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL------------- 489 (692)
Q Consensus 424 ~l~~~~l~~~y~-~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~~------------- 489 (692)
+|+++||++.|+ ++++|+++||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.++.
T Consensus 1 ~l~~~~l~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 80 (243)
T TIGR02315 1 MLEVENLSKVYPNGKQALKNINLNINPGEFVAIIGPSGAGKSTLLRCINRLVEPSSGSILLEGTDITKLRGKKLRKLRRR 80 (243)
T ss_pred CeEEEeeeeecCCCcceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCccEEEECCEEhhhCCHHHHHHHHhh
Confidence 478999999998 778999999999999999999999999999999999999999999999886542
Q ss_pred eeeecccchhhcCCCccHHHHHHHHhc--------------cccHHHHHHHHhhcCCCcccccccCCCCCHHHHHHHHHH
Q 005532 490 PNYFEQNQAEALDLDKTVLETVAEAAE--------------DWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFC 555 (692)
Q Consensus 490 ~~~~~q~~~~~l~~~~tv~e~~~~~~~--------------~~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~LA 555 (692)
.+|++|+. .+.+..|+.+|+..... .....++.++++.+++. ...++++.+|||||||||+||
T Consensus 81 i~~v~q~~--~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LSgG~~qrv~la 157 (243)
T TIGR02315 81 IGMIFQHY--NLIERLTVLENVLHGRLGYKPTWRSLLGRFSEEDKERALSALERVGLA-DKAYQRADQLSGGQQQRVAIA 157 (243)
T ss_pred eEEEcCCC--cccccccHHHHHhhcccccccchhhhhccccHHHHHHHHHHHHHcCcH-hhhcCCcccCCHHHHHHHHHH
Confidence 34566543 45567899999864211 01123577889999995 567899999999999999999
Q ss_pred HHhccCCcEEEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEECCEEEEecCChhHH
Q 005532 556 KFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYY 628 (692)
Q Consensus 556 ral~~~p~lLlLDEPTn~LD~~~~~~l~~~l~~~----~~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~~~ 628 (692)
|||+.+|+||||||||++||+.+++.+.+.|+++ +.|||+||||++++.++||++++|++|++. ..|+.+++
T Consensus 158 ~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~G~i~-~~~~~~~~ 233 (243)
T TIGR02315 158 RALAQQPDLILADEPIASLDPKTSKQVMDYLKRINKEDGITVIINLHQVDLAKKYADRIVGLKAGEIV-FDGAPSEL 233 (243)
T ss_pred HHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEEE-ecCCHHHh
Confidence 9999999999999999999999999999999865 459999999999999999999999999998 45766554
No 204
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.9e-40 Score=334.18 Aligned_cols=193 Identities=25% Similarity=0.445 Sum_probs=169.2
Q ss_pred EEEEeEEEEcCCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccce------eeeecccch
Q 005532 425 VTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL------PNYFEQNQA 498 (692)
Q Consensus 425 l~~~~l~~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~~------~~~~~q~~~ 498 (692)
|+++|+++.|+++.+|+++||+|.+|++++|+||||||||||+++|+|+++|++|+|.++|.++. .+|++|+.
T Consensus 1 l~~~~l~~~~~~~~~l~~v~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~i~~~~q~~- 79 (210)
T cd03269 1 LEVENVTKRFGRVTALDDISFSVEKGEIFGLLGPNGAGKTTTIRMILGIILPDSGEVLFDGKPLDIAARNRIGYLPEER- 79 (210)
T ss_pred CEEEEEEEEECCEEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCCchhHHHHccEEEeccCC-
Confidence 47899999999888999999999999999999999999999999999999999999999987652 45666653
Q ss_pred hhcCCCccHHHHHHHHhcc--c----cHHHHHHHHhhcCCCcccccccCCCCCHHHHHHHHHHHHhccCCcEEEEeCCCC
Q 005532 499 EALDLDKTVLETVAEAAED--W----RIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTN 572 (692)
Q Consensus 499 ~~l~~~~tv~e~~~~~~~~--~----~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~LAral~~~p~lLlLDEPTn 572 (692)
.+.+..|+.+|+...... . ....+.++++.+++. ...++++.+|||||||||+|||||+.+|++|||||||+
T Consensus 80 -~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LS~G~~qrl~la~al~~~p~~lllDEP~~ 157 (210)
T cd03269 80 -GLYPKMKVIDQLVYLAQLKGLKKEEARRRIDEWLERLELS-EYANKRVEELSKGNQQKVQFIAAVIHDPELLILDEPFS 157 (210)
T ss_pred -cCCcCCcHHHHHHHHHHHcCCChHHHHHHHHHHHHHcCCh-HHHhCcHhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCc
Confidence 455678999998754221 1 123577889999995 56788999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhccEEEEEECCEEEE
Q 005532 573 HLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKGSNLQD 620 (692)
Q Consensus 573 ~LD~~~~~~l~~~l~~~---~~tviivSHd~~~l~~~~d~i~~l~~g~l~~ 620 (692)
+||+.+++++.+.|+++ +.|||+||||.+++..+||++++|++|++..
T Consensus 158 ~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~ 208 (210)
T cd03269 158 GLDPVNVELLKDVIRELARAGKTVILSTHQMELVEELCDRVLLLNKGRAVL 208 (210)
T ss_pred CCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHhhhEEEEEeCCEEEe
Confidence 99999999999999875 3599999999999999999999999999874
No 205
>PRK10253 iron-enterobactin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-40 Score=346.62 Aligned_cols=211 Identities=24% Similarity=0.315 Sum_probs=175.3
Q ss_pred CcEEEEeEEEEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC----------ceEEE
Q 005532 96 SGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN----------MKIAF 165 (692)
Q Consensus 96 ~~l~i~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~----------~~i~~ 165 (692)
..|+++|++++|+++.+|+|+||+|.+|++++|+||||||||||+++|+|+++|++|+|.++|.. ..|+|
T Consensus 6 ~~l~i~~l~~~~~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 85 (265)
T PRK10253 6 ARLRGEQLTLGYGKYTVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMTPAHGHVWLDGEHIQHYASKEVARRIGL 85 (265)
T ss_pred cEEEEEEEEEEECCEEEeeecceEECCCCEEEEECCCCCCHHHHHHHHcCCCCCCCcEEEECCEEhhhCCHHHHhhheEE
Confidence 35999999999998889999999999999999999999999999999999999999999998742 25999
Q ss_pred EcccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHHhhh
Q 005532 166 LSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPE 245 (692)
Q Consensus 166 v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~ 245 (692)
++|++.+++..|+.+|+.......... +. ........++.++++.
T Consensus 86 v~q~~~~~~~~tv~~~~~~~~~~~~~~----------~~-------------------------~~~~~~~~~~~~~l~~ 130 (265)
T PRK10253 86 LAQNATTPGDITVQELVARGRYPHQPL----------FT-------------------------RWRKEDEEAVTKAMQA 130 (265)
T ss_pred eeccCcCCCCCcHHHHHHhCccccccc----------cc-------------------------CCCHHHHHHHHHHHHH
Confidence 999998877889999985321000000 00 0000112356677888
Q ss_pred cCCCccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc----CCCeEEEEecCHHHHHh
Q 005532 246 LGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVIISHDRAFLDQ 321 (692)
Q Consensus 246 lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~----~~~tvI~vsHd~~~l~~ 321 (692)
+|+. ...++++.+||||||||++|||||+.+|++|||||||+|||+.+++++.++|++ .+.|||++|||++++..
T Consensus 131 ~~l~-~~~~~~~~~LS~Gq~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~L~~l~~~~~~tiii~tH~~~~~~~ 209 (265)
T PRK10253 131 TGIT-HLADQSVDTLSGGQRQRAWIAMVLAQETAIMLLDEPTTWLDISHQIDLLELLSELNREKGYTLAAVLHDLNQACR 209 (265)
T ss_pred cCCH-HHhcCCcccCChHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHH
Confidence 8886 567899999999999999999999999999999999999999999999887743 47899999999999999
Q ss_pred hcCeEEEEecceEEEeccChHH
Q 005532 322 LCTKIVETEMGVSRTYEGNYSQ 343 (692)
Q Consensus 322 ~~d~i~~l~~G~~~~~~G~y~~ 343 (692)
+||+|+++++|++. ..|...+
T Consensus 210 ~~d~i~~l~~G~i~-~~g~~~~ 230 (265)
T PRK10253 210 YASHLIALREGKIV-AQGAPKE 230 (265)
T ss_pred hCCEEEEEECCEEE-EeCCHHH
Confidence 99999999999974 5566443
No 206
>TIGR02323 CP_lyasePhnK phosphonate C-P lyase system protein PhnK. Members of this family are the PhnK protein of C-P lyase systems for utilization of phosphonates. These systems resemble phosphonatase-based systems in having a three component ABC transporter, where TIGR01097 is the permease, TIGR01098 is the phosphonates binding protein, and TIGR02315 is the ATP-binding cassette (ABC) protein. They differ, however, in having, typically, ten or more additional genes, many of which are believed to form a membrane-associated complex. This protein (PhnK) and the adjacent-encoded PhnL resemble transporter ATP-binding proteins but are suggested, based on mutatgenesis studies, to be part of this complex rather than part of a transporter per se.
Probab=100.00 E-value=2.4e-40 Score=342.93 Aligned_cols=208 Identities=25% Similarity=0.406 Sum_probs=171.0
Q ss_pred cEEEEeEEEEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC----------------
Q 005532 97 GVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN---------------- 160 (692)
Q Consensus 97 ~l~i~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~---------------- 160 (692)
+|+++|++++|++.++|+|+||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|.+
T Consensus 3 ~l~~~~l~~~~~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~ 82 (253)
T TIGR02323 3 LLQVSGLSKSYGGGKGCRDVSFDLYPGEVLGIVGESGSGKSTLLGCLAGRLAPDHGTATYIMRSGAELELYQLSEAERRR 82 (253)
T ss_pred eEEEeeeEEEeCCceEeecceEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEEecccccccccccCCHHHHHH
Confidence 5999999999988889999999999999999999999999999999999999999999998643
Q ss_pred ---ceEEEEcccCc--cCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccH
Q 005532 161 ---MKIAFLSQEFE--VSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTL 235 (692)
Q Consensus 161 ---~~i~~v~Q~~~--~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (692)
..|+|++|++. +.+..|+.+|+...+.. ... ......
T Consensus 83 ~~~~~i~~~~q~~~~~~~~~~~~~~~i~~~~~~--------------~~~------------------------~~~~~~ 124 (253)
T TIGR02323 83 LMRTEWGFVHQNPRDGLRMRVSAGANIGERLMA--------------IGA------------------------RHYGNI 124 (253)
T ss_pred hhhcceEEEEeCcccccCccccHHHHHHHHHHH--------------hcc------------------------cchHHH
Confidence 14899999974 33456788887421100 000 000012
Q ss_pred HHHHHHHhhhcCCCccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc----CCCeEEE
Q 005532 236 DAKVSKLMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVI 311 (692)
Q Consensus 236 ~~~i~~ll~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~----~~~tvI~ 311 (692)
+..+.++++.+|+.....++++.+|||||||||+|||||+.+|++|||||||+|||+.+++++.++|++ .+.|||+
T Consensus 125 ~~~~~~~l~~l~l~~~~~~~~~~~LSgG~~qrv~laral~~~p~vlllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~ 204 (253)
T TIGR02323 125 RAAAHDWLEEVEIDPTRIDDLPRAFSGGMQQRLQIARNLVTRPRLVFMDEPTGGLDVSVQARLLDLLRGLVRDLGLAVII 204 (253)
T ss_pred HHHHHHHHHHcCCChhhhhcCchhcCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEE
Confidence 345667888889864467889999999999999999999999999999999999999999999887642 4899999
Q ss_pred EecCHHHHHhhcCeEEEEecceEEEeccChHH
Q 005532 312 ISHDRAFLDQLCTKIVETEMGVSRTYEGNYSQ 343 (692)
Q Consensus 312 vsHd~~~l~~~~d~i~~l~~G~~~~~~G~y~~ 343 (692)
|||+++++..+||+++++++|++. ..|...+
T Consensus 205 vsH~~~~~~~~~d~~~~l~~G~i~-~~~~~~~ 235 (253)
T TIGR02323 205 VTHDLGVARLLAQRLLVMQQGRVV-ESGLTDQ 235 (253)
T ss_pred EeCCHHHHHHhcCEEEEEECCEEE-EECCHHH
Confidence 999999999999999999999984 4565443
No 207
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.6e-40 Score=344.12 Aligned_cols=209 Identities=22% Similarity=0.305 Sum_probs=170.6
Q ss_pred CCcEEEEeEEEEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCC-----CCccEEEECCCC---------
Q 005532 95 SSGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEE-----PDSGNVIKAKSN--------- 160 (692)
Q Consensus 95 ~~~l~i~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~-----p~~G~I~~~~~~--------- 160 (692)
.+.|+++|+++.|++.++|+|+||+|++|++++|+||||||||||+++|+|+++ |++|+|.++|..
T Consensus 11 ~~~l~~~~l~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~p~~G~i~~~g~~~~~~~~~~~ 90 (260)
T PRK10744 11 PSKIQVRNLNFYYGKFHALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNRMYELYPEQRAEGEILLDGENILTPKQDIA 90 (260)
T ss_pred CceEEEEEEEEEeCCeEEeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcceEEEECCEEccccccchH
Confidence 446999999999998889999999999999999999999999999999999986 589999998632
Q ss_pred ---ceEEEEcccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHH
Q 005532 161 ---MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDA 237 (692)
Q Consensus 161 ---~~i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (692)
..|+|++|++.++. .|+++|+...... .. ..+......
T Consensus 91 ~~~~~i~~~~q~~~~~~-~tv~~nl~~~~~~--------------~~------------------------~~~~~~~~~ 131 (260)
T PRK10744 91 LLRAKVGMVFQKPTPFP-MSIYDNIAFGVRL--------------FE------------------------KLSRAEMDE 131 (260)
T ss_pred HHhcceEEEecCCccCc-CcHHHHHhhhHhh--------------cC------------------------CCCHHHHHH
Confidence 25999999987755 8999998532100 00 001112233
Q ss_pred HHHHHhhhcCCCc---cccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc--CCCeEEEE
Q 005532 238 KVSKLMPELGFTA---DDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVII 312 (692)
Q Consensus 238 ~i~~ll~~lgl~~---~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~--~~~tvI~v 312 (692)
++.++++.+|+.. ...++++.+|||||+|||+|||||+.+|+||||||||++||+.+++++.+.|++ .+.|||+|
T Consensus 132 ~~~~~l~~~~l~~~~~~~~~~~~~~LS~Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiii~ 211 (260)
T PRK10744 132 RVEWALTKAALWNEVKDKLHQSGYSLSGGQQQRLCIARGIAIRPEVLLLDEPCSALDPISTGRIEELITELKQDYTVVIV 211 (260)
T ss_pred HHHHHHHHcCCChhhHHHHhcCCCCCCHHHHHHHHHHHHHHCCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCeEEEE
Confidence 4556777777631 345778899999999999999999999999999999999999999999888753 36899999
Q ss_pred ecCHHHHHhhcCeEEEEecceEEEeccChHH
Q 005532 313 SHDRAFLDQLCTKIVETEMGVSRTYEGNYSQ 343 (692)
Q Consensus 313 sHd~~~l~~~~d~i~~l~~G~~~~~~G~y~~ 343 (692)
||+++++..+||+|+++++|++. ..|...+
T Consensus 212 sH~~~~~~~~~d~i~~l~~G~i~-~~g~~~~ 241 (260)
T PRK10744 212 THNMQQAARCSDYTAFMYLGELI-EFGNTDT 241 (260)
T ss_pred eCCHHHHHHhCCEEEEEECCEEE-EeCCHHH
Confidence 99999999999999999999984 4465443
No 208
>PRK14241 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.3e-40 Score=342.97 Aligned_cols=209 Identities=21% Similarity=0.318 Sum_probs=171.6
Q ss_pred cEEEEeEEEEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCC-----CccEEEECCCC-----------
Q 005532 97 GVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEP-----DSGNVIKAKSN----------- 160 (692)
Q Consensus 97 ~l~i~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p-----~~G~I~~~~~~----------- 160 (692)
.|+++|++++|+++++|+|+||+|++|++++|+||||||||||+++|+|+++| ++|+|.++|.+
T Consensus 4 ~l~i~~v~~~~~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~laGl~~~~~~~~~~G~I~~~g~~~~~~~~~~~~~ 83 (258)
T PRK14241 4 RIDVKDLNIYYGSFHAVEDVNLNIEPRSVTAFIGPSGCGKSTVLRTLNRMHEVIPGARVEGEVLLDGEDLYGPGVDPVAV 83 (258)
T ss_pred cEEEeeEEEEECCEeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcccCCCcceEEEECCEeccccccChHHH
Confidence 59999999999988899999999999999999999999999999999999974 79999998742
Q ss_pred -ceEEEEcccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHH
Q 005532 161 -MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKV 239 (692)
Q Consensus 161 -~~i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 239 (692)
..|+|++|++.+++..|+++|+...+.. .. .......++++
T Consensus 84 ~~~i~~~~q~~~~~~~~tv~~nl~~~~~~---------------~~-----------------------~~~~~~~~~~~ 125 (258)
T PRK14241 84 RRTIGMVFQRPNPFPTMSIRDNVVAGLKL---------------NG-----------------------VRNKKDLDELV 125 (258)
T ss_pred hcceEEEccccccCCCCcHHHHHHHHHHh---------------cC-----------------------CCCHHHHHHHH
Confidence 2499999998887788999998532110 00 00011123345
Q ss_pred HHHhhhcCCC---ccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc--CCCeEEEEec
Q 005532 240 SKLMPELGFT---ADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVIISH 314 (692)
Q Consensus 240 ~~ll~~lgl~---~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~--~~~tvI~vsH 314 (692)
.++++.+|+. ....++++.+|||||||||+|||||+.+|++|||||||+|||+.++.++.++|++ .++|||+|||
T Consensus 126 ~~~l~~~~l~~~~~~~~~~~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tviivsH 205 (258)
T PRK14241 126 EKSLRGANLWNEVKDRLDKPGGGLSGGQQQRLCIARAIAVEPDVLLMDEPCSALDPISTLAIEDLINELKQDYTIVIVTH 205 (258)
T ss_pred HHHHHHcCCchhhhhHhhCCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEec
Confidence 6677777763 1356788999999999999999999999999999999999999999999887753 3689999999
Q ss_pred CHHHHHhhcCeEEEEe------cceEEEeccChHHH
Q 005532 315 DRAFLDQLCTKIVETE------MGVSRTYEGNYSQY 344 (692)
Q Consensus 315 d~~~l~~~~d~i~~l~------~G~~~~~~G~y~~~ 344 (692)
+++++..+||+|++++ +|++. +.|...++
T Consensus 206 ~~~~~~~~~d~i~~l~~~~~~~~g~i~-~~~~~~~~ 240 (258)
T PRK14241 206 NMQQAARVSDQTAFFNLEATGKPGRLV-EIDDTEKI 240 (258)
T ss_pred CHHHHHHhCCEEEEEecccCCCCceEE-ecCCHHHH
Confidence 9999999999999996 68874 55665443
No 209
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=1.1e-40 Score=337.65 Aligned_cols=190 Identities=32% Similarity=0.497 Sum_probs=163.9
Q ss_pred EEEEeEEEEcCC----eecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccce-----------
Q 005532 425 VTIKNLEFGYED----RLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL----------- 489 (692)
Q Consensus 425 l~~~~l~~~y~~----~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~~----------- 489 (692)
|+++||++.|++ +++|+++||+|++|+++||+||||||||||+++|+|+++|++|+|.++|.++.
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~~s~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~ 80 (218)
T cd03255 1 IELKNLSKTYGGGGEKVQALKGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDRPTSGEVRVDGTDISKLSEKELAAFR 80 (218)
T ss_pred CeEeeeEEEecCCCcceeEEeeeEEEEcCCCEEEEEcCCCCCHHHHHHHHhCCcCCCceeEEECCEehhhcchhHHHHHH
Confidence 478999999986 78999999999999999999999999999999999999999999999886541
Q ss_pred ---eeeecccchhhcCCCccHHHHHHHHhcc--c----cHHHHHHHHhhcCCCcccccccCCCCCHHHHHHHHHHHHhcc
Q 005532 490 ---PNYFEQNQAEALDLDKTVLETVAEAAED--W----RIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVK 560 (692)
Q Consensus 490 ---~~~~~q~~~~~l~~~~tv~e~~~~~~~~--~----~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~LAral~~ 560 (692)
.+|++|. ..+.+..|+.+|+...... . ....+.++++.+|+. ...++++.+|||||||||+|||||+.
T Consensus 81 ~~~i~~~~q~--~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LS~G~~qrv~la~al~~ 157 (218)
T cd03255 81 RRHIGFVFQS--FNLLPDLTALENVELPLLLAGVPKKERRERAEELLERVGLG-DRLNHYPSELSGGQQQRVAIARALAN 157 (218)
T ss_pred hhcEEEEeec--cccCCCCcHHHHHHHHHhhcCCCHHHHHHHHHHHHHHcCCc-hhhhcChhhcCHHHHHHHHHHHHHcc
Confidence 3455554 3455678999998764321 1 123577899999995 55788999999999999999999999
Q ss_pred CCcEEEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEECCEE
Q 005532 561 PSTLLVLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNL 618 (692)
Q Consensus 561 ~p~lLlLDEPTn~LD~~~~~~l~~~l~~~----~~tviivSHd~~~l~~~~d~i~~l~~g~l 618 (692)
+|+||||||||++||+.+++.+.+.|.++ +.|||+||||.+++. +||++++|++|++
T Consensus 158 ~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~-~~d~v~~l~~G~i 218 (218)
T cd03255 158 DPKIILADEPTGNLDSETGKEVMELLRELNKEAGTTIVVVTHDPELAE-YADRIIELRDGKI 218 (218)
T ss_pred CCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHh-hhcEEEEeeCCcC
Confidence 99999999999999999999999999865 459999999999997 8999999999864
No 210
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=100.00 E-value=1.3e-40 Score=336.29 Aligned_cols=191 Identities=30% Similarity=0.423 Sum_probs=165.7
Q ss_pred eEEEEeEEEEcC-CeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccce-------------
Q 005532 424 VVTIKNLEFGYE-DRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL------------- 489 (692)
Q Consensus 424 ~l~~~~l~~~y~-~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~~------------- 489 (692)
+|+++|+++.|+ ++.+|+++||+|++|+++||+||||||||||+++|+|+++|++|+|.++|.++.
T Consensus 1 ~l~~~~l~~~~~~~~~il~~is~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 80 (214)
T TIGR02673 1 MIEFHNVSKAYPGGVAALHDVSLHIRKGEFLFLTGPSGAGKTTLLKLLYGALTPSRGQVRIAGEDVNRLRGRQLPLLRRR 80 (214)
T ss_pred CEEEEeeeEEeCCCceeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHHHhh
Confidence 478999999994 678999999999999999999999999999999999999999999999886542
Q ss_pred eeeecccchhhcCCCccHHHHHHHHhc------cccHHHHHHHHhhcCCCcccccccCCCCCHHHHHHHHHHHHhccCCc
Q 005532 490 PNYFEQNQAEALDLDKTVLETVAEAAE------DWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPST 563 (692)
Q Consensus 490 ~~~~~q~~~~~l~~~~tv~e~~~~~~~------~~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~LAral~~~p~ 563 (692)
.+|++|.. .+.+..|+.+|+..... ......+..+++.+++. ...++++.+|||||||||+|||||+.+|+
T Consensus 81 i~~~~q~~--~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LS~G~~qrl~la~al~~~p~ 157 (214)
T TIGR02673 81 IGVVFQDF--RLLPDRTVYENVALPLEVRGKKEREIQRRVGAALRQVGLE-HKADAFPEQLSGGEQQRVAIARAIVNSPP 157 (214)
T ss_pred eEEEecCh--hhccCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCh-hhhhCChhhCCHHHHHHHHHHHHHhCCCC
Confidence 24555543 45567899999876421 11124577899999995 56788999999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhccEEEEEECCE
Q 005532 564 LLVLDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKGSN 617 (692)
Q Consensus 564 lLlLDEPTn~LD~~~~~~l~~~l~~~---~~tviivSHd~~~l~~~~d~i~~l~~g~ 617 (692)
+|||||||++||+.++..+.+.|+++ +.|||+||||.+++..+||++++|++|+
T Consensus 158 lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~ 214 (214)
T TIGR02673 158 LLLADEPTGNLDPDLSERILDLLKRLNKRGTTVIVATHDLSLVDRVAHRVIILDDGR 214 (214)
T ss_pred EEEEeCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEecCCC
Confidence 99999999999999999999999875 4699999999999999999999999874
No 211
>PRK11248 tauB taurine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.2e-40 Score=343.40 Aligned_cols=194 Identities=26% Similarity=0.399 Sum_probs=169.5
Q ss_pred eEEEEeEEEEcCCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccce-----eeeecccch
Q 005532 424 VVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL-----PNYFEQNQA 498 (692)
Q Consensus 424 ~l~~~~l~~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~~-----~~~~~q~~~ 498 (692)
+|+++|+++.|+++.+|+|+||+|++|+++||+||||||||||+++|+|+++|++|+|.++|.++. .+|++|..
T Consensus 1 ml~~~~l~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~v~q~~- 79 (255)
T PRK11248 1 MLQISHLYADYGGKPALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVPYQHGSITLDGKPVEGPGAERGVVFQNE- 79 (255)
T ss_pred CEEEEEEEEEeCCeeeEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCCcEEEEeCCC-
Confidence 488999999998888999999999999999999999999999999999999999999999887652 45666653
Q ss_pred hhcCCCccHHHHHHHHhcc--c----cHHHHHHHHhhcCCCcccccccCCCCCHHHHHHHHHHHHhccCCcEEEEeCCCC
Q 005532 499 EALDLDKTVLETVAEAAED--W----RIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTN 572 (692)
Q Consensus 499 ~~l~~~~tv~e~~~~~~~~--~----~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~LAral~~~p~lLlLDEPTn 572 (692)
.+.+..|+.+|+...... . ....+.++++.+|+. ...++++.+|||||||||+|||||+.+|++|||||||+
T Consensus 80 -~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~-~~~~~~~~~LSgGq~qrl~laral~~~p~lllLDEPt~ 157 (255)
T PRK11248 80 -GLLPWRNVQDNVAFGLQLAGVEKMQRLEIAHQMLKKVGLE-GAEKRYIWQLSGGQRQRVGIARALAANPQLLLLDEPFG 157 (255)
T ss_pred -ccCCCCcHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCCh-hHhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCc
Confidence 455678999998753211 1 123578899999995 56788999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEE--CCEEEE
Q 005532 573 HLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVK--GSNLQD 620 (692)
Q Consensus 573 ~LD~~~~~~l~~~l~~~----~~tviivSHd~~~l~~~~d~i~~l~--~g~l~~ 620 (692)
+||+.++..+.+.|.++ +.|||+||||++++..+||+|++|+ +|++..
T Consensus 158 ~LD~~~~~~l~~~L~~~~~~~g~tviivsH~~~~~~~~~d~i~~l~~~~G~i~~ 211 (255)
T PRK11248 158 ALDAFTREQMQTLLLKLWQETGKQVLLITHDIEEAVFMATELVLLSPGPGRVVE 211 (255)
T ss_pred cCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCCcEEEE
Confidence 99999999999999875 4599999999999999999999998 488864
No 212
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.3e-40 Score=346.85 Aligned_cols=206 Identities=26% Similarity=0.391 Sum_probs=171.4
Q ss_pred cEEEEeEEEEeC-CeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC-----------ceEE
Q 005532 97 GVKLENISKSYK-GVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN-----------MKIA 164 (692)
Q Consensus 97 ~l~i~~ls~~y~-~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~-----------~~i~ 164 (692)
+|+++|++++|+ +.++|+|+||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|.. ..|+
T Consensus 1 ml~~~~l~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i~ 80 (274)
T PRK13644 1 MIRLENVSYSYPDGTPALENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLRPQKGKVLVSGIDTGDFSKLQGIRKLVG 80 (274)
T ss_pred CEEEEEEEEEcCCCCceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEECCccccHHHHHhheE
Confidence 378999999996 4679999999999999999999999999999999999999999999998742 2499
Q ss_pred EEcccCcc-CCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHHh
Q 005532 165 FLSQEFEV-SMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLM 243 (692)
Q Consensus 165 ~v~Q~~~~-~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll 243 (692)
|++|+|.. ++..|+.+|+...... ...+.....+++.+++
T Consensus 81 ~v~q~~~~~~~~~tv~enl~~~~~~---------------------------------------~~~~~~~~~~~~~~~l 121 (274)
T PRK13644 81 IVFQNPETQFVGRTVEEDLAFGPEN---------------------------------------LCLPPIEIRKRVDRAL 121 (274)
T ss_pred EEEEChhhhcccchHHHHHHhhHHH---------------------------------------cCCCHHHHHHHHHHHH
Confidence 99999863 4667999998521100 0011122334566778
Q ss_pred hhcCCCccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHc---cCCCeEEEEecCHHHHH
Q 005532 244 PELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG---KQDVPMVIISHDRAFLD 320 (692)
Q Consensus 244 ~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~---~~~~tvI~vsHd~~~l~ 320 (692)
+.+|+. ...++++.+|||||+|||+|||||+.+|+||||||||++||+.++..+.+.|+ +.|.|||++|||++++.
T Consensus 122 ~~~gl~-~~~~~~~~~LS~G~~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~~tH~~~~~~ 200 (274)
T PRK13644 122 AEIGLE-KYRHRSPKTLSGGQGQCVALAGILTMEPECLIFDEVTSMLDPDSGIAVLERIKKLHEKGKTIVYITHNLEELH 200 (274)
T ss_pred HHCCCH-HHhcCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHh
Confidence 888986 56788999999999999999999999999999999999999999999988774 35899999999999995
Q ss_pred hhcCeEEEEecceEEEeccChHHH
Q 005532 321 QLCTKIVETEMGVSRTYEGNYSQY 344 (692)
Q Consensus 321 ~~~d~i~~l~~G~~~~~~G~y~~~ 344 (692)
.||+|+++++|++ .+.|...++
T Consensus 201 -~~d~v~~l~~G~i-~~~g~~~~~ 222 (274)
T PRK13644 201 -DADRIIVMDRGKI-VLEGEPENV 222 (274)
T ss_pred -hCCEEEEEECCEE-EEECCHHHH
Confidence 6999999999997 456765543
No 213
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=100.00 E-value=8.2e-41 Score=337.52 Aligned_cols=192 Identities=29% Similarity=0.457 Sum_probs=164.7
Q ss_pred EEEeEEEEcCCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccc-----eeeeecccchhh
Q 005532 426 TIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNV-----LPNYFEQNQAEA 500 (692)
Q Consensus 426 ~~~~l~~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~-----~~~~~~q~~~~~ 500 (692)
+++||++.|+++.+|+++||+|++|+++||+||||||||||+++|+|+++|++|+|.++|.++ ..+|++|+....
T Consensus 1 ~~~~l~~~~~~~~~l~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~i~~v~q~~~~~ 80 (213)
T cd03235 1 EVEDLTVSYGGHPVLEDVSFEVKPGEFLAIVGPNGAGKSTLLKAILGLLKPTSGSIRVFGKPLEKERKRIGYVPQRRSID 80 (213)
T ss_pred CcccceeEECCEEeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCccHHHHHhheEEeccccccc
Confidence 368999999888899999999999999999999999999999999999999999999998654 246777754221
Q ss_pred cCCCccHHHHHHHHhcc----------ccHHHHHHHHhhcCCCcccccccCCCCCHHHHHHHHHHHHhccCCcEEEEeCC
Q 005532 501 LDLDKTVLETVAEAAED----------WRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEP 570 (692)
Q Consensus 501 l~~~~tv~e~~~~~~~~----------~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~LAral~~~p~lLlLDEP 570 (692)
..+..|+.+|+...... .....+..+++.+++. ...++++.+|||||||||+|||||+.+|++||||||
T Consensus 81 ~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LSgG~~qrv~la~al~~~p~llllDEP 159 (213)
T cd03235 81 RDFPISVRDVVLMGLYGHKGLFRRLSKADKAKVDEALERVGLS-ELADRQIGELSGGQQQRVLLARALVQDPDLLLLDEP 159 (213)
T ss_pred cCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHcCCH-HHHhCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCC
Confidence 12347999998764221 1123577899999995 567899999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhccEEEEEECCEE
Q 005532 571 TNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKGSNL 618 (692)
Q Consensus 571 Tn~LD~~~~~~l~~~l~~~---~~tviivSHd~~~l~~~~d~i~~l~~g~l 618 (692)
|++||+.+++.+.+.|.++ +.|||+||||++++.++||+|++|++|.+
T Consensus 160 t~~LD~~~~~~l~~~l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~~~~ 210 (213)
T cd03235 160 FAGVDPKTQEDIYELLRELRREGMTILVVTHDLGLVLEYFDRVLLLNRTVV 210 (213)
T ss_pred cccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEcCcEe
Confidence 9999999999999999875 35999999999999999999999988643
No 214
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=100.00 E-value=3e-40 Score=350.50 Aligned_cols=203 Identities=23% Similarity=0.376 Sum_probs=179.1
Q ss_pred eEEEEeEEEEcCCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccce---------eeeec
Q 005532 424 VVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL---------PNYFE 494 (692)
Q Consensus 424 ~l~~~~l~~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~~---------~~~~~ 494 (692)
.++++|++++|+++.+|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++. .+|++
T Consensus 2 ~l~~~~l~~~~~~~~~l~~is~~i~~Gei~~l~G~NGaGKTTLl~~l~Gl~~~~~G~i~i~g~~~~~~~~~~~~~ig~~~ 81 (301)
T TIGR03522 2 SIRVSSLTKLYGTQNALDEVSFEAQKGRIVGFLGPNGAGKSTTMKIITGYLPPDSGSVQVCGEDVLQNPKEVQRNIGYLP 81 (301)
T ss_pred EEEEEEEEEEECCEEEEEEeEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccChHHHHhceEEec
Confidence 489999999999889999999999999999999999999999999999999999999999987642 45666
Q ss_pred ccchhhcCCCccHHHHHHHHhccc--c----HHHHHHHHhhcCCCcccccccCCCCCHHHHHHHHHHHHhccCCcEEEEe
Q 005532 495 QNQAEALDLDKTVLETVAEAAEDW--R----IDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLD 568 (692)
Q Consensus 495 q~~~~~l~~~~tv~e~~~~~~~~~--~----~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~LAral~~~p~lLlLD 568 (692)
|. ..+.+..|+.+|+....... . ...+..+++.+|+. +..++++..|||||||||+||+||+.+|++||||
T Consensus 82 q~--~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~-~~~~~~~~~LS~G~~qrv~la~al~~~p~lliLD 158 (301)
T TIGR03522 82 EH--NPLYLDMYVREYLQFIAGIYGMKGQLLKQRVEEMIELVGLR-PEQHKKIGQLSKGYRQRVGLAQALIHDPKVLILD 158 (301)
T ss_pred CC--CCCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCc-hHhcCchhhCCHHHHHHHHHHHHHhcCCCEEEEc
Confidence 65 34667889999987543211 1 24578899999995 5678999999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhccEEEEEECCEEEEecCChhHHHH
Q 005532 569 EPTNHLDIPSKEMLEEAISEY--KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYYLE 630 (692)
Q Consensus 569 EPTn~LD~~~~~~l~~~l~~~--~~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~~~~~ 630 (692)
|||+|||+.+++++.+.|+++ +.|||++||+++++.++||||++|++|++. +.|+.+++..
T Consensus 159 EPt~gLD~~~~~~l~~~l~~~~~~~tiii~sH~l~~~~~~~d~i~~l~~G~i~-~~g~~~~~~~ 221 (301)
T TIGR03522 159 EPTTGLDPNQLVEIRNVIKNIGKDKTIILSTHIMQEVEAICDRVIIINKGKIV-ADKKLDELSA 221 (301)
T ss_pred CCcccCCHHHHHHHHHHHHHhcCCCEEEEEcCCHHHHHHhCCEEEEEECCEEE-EeCCHHHHHH
Confidence 999999999999999999877 469999999999999999999999999998 5688888754
No 215
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.1e-40 Score=343.86 Aligned_cols=210 Identities=18% Similarity=0.279 Sum_probs=171.7
Q ss_pred CCcEEEEeEEEEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCC-----CccEEEECCCC---------
Q 005532 95 SSGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEP-----DSGNVIKAKSN--------- 160 (692)
Q Consensus 95 ~~~l~i~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p-----~~G~I~~~~~~--------- 160 (692)
++.|+++|++++|+++++|+|+||+|++|++++|+|+||||||||+++|+|+++| ++|+|.++|.+
T Consensus 17 ~~~l~~~nl~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~I~~~g~~i~~~~~~~~ 96 (267)
T PRK14235 17 EIKMRARDVSVFYGEKQALFDVDLDIPEKTVTAFIGPSGCGKSTFLRCLNRMNDTIDGCRVTGKITLDGEDIYDPRLDVV 96 (267)
T ss_pred CceEEEEeEEEEECCEEEEEEEEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEECcccccchH
Confidence 4579999999999988899999999999999999999999999999999999975 89999998732
Q ss_pred ---ceEEEEcccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHH
Q 005532 161 ---MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDA 237 (692)
Q Consensus 161 ---~~i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (692)
..|+|++|++.+++ .|+.+|+...... .... ........
T Consensus 97 ~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~---------------~~~~----------------------~~~~~~~~ 138 (267)
T PRK14235 97 ELRARVGMVFQKPNPFP-KSIYENVAYGPRI---------------HGLA----------------------RSKAELDE 138 (267)
T ss_pred HHhhceEEEecCCCCCC-CcHHHHHHHHHHh---------------cccc----------------------cchHHHHH
Confidence 24899999988765 5999998532100 0000 00011234
Q ss_pred HHHHHhhhcCCCc---cccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc--CCCeEEEE
Q 005532 238 KVSKLMPELGFTA---DDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVII 312 (692)
Q Consensus 238 ~i~~ll~~lgl~~---~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~--~~~tvI~v 312 (692)
++.++++.+|+.. ...++++.+|||||||||+|||||+.+|+||||||||++||+.++.++.++|++ .+.|||+|
T Consensus 139 ~~~~~l~~~~l~~~~~~~~~~~~~~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~l~~~~tiiiv 218 (267)
T PRK14235 139 IVETSLRKAGLWEEVKDRLHEPGTGLSGGQQQRLCIARAIAVSPEVILMDEPCSALDPIATAKVEELIDELRQNYTIVIV 218 (267)
T ss_pred HHHHHHHHcCCchhhhHHhhCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHhcCCeEEEE
Confidence 4567777888742 245778999999999999999999999999999999999999999999988753 36899999
Q ss_pred ecCHHHHHhhcCeEEEEecceEEEeccChHH
Q 005532 313 SHDRAFLDQLCTKIVETEMGVSRTYEGNYSQ 343 (692)
Q Consensus 313 sHd~~~l~~~~d~i~~l~~G~~~~~~G~y~~ 343 (692)
|||++++..+||+++++++|++. ..|...+
T Consensus 219 tH~~~~~~~~~d~v~~l~~G~i~-~~g~~~~ 248 (267)
T PRK14235 219 THSMQQAARVSQRTAFFHLGNLV-EVGDTEK 248 (267)
T ss_pred EcCHHHHHhhCCEEEEEECCEEE-EeCCHHH
Confidence 99999999999999999999984 4565443
No 216
>PRK14256 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.5e-40 Score=341.56 Aligned_cols=209 Identities=20% Similarity=0.327 Sum_probs=170.5
Q ss_pred CcEEEEeEEEEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCC--C---CccEEEECCCC----------
Q 005532 96 SGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEE--P---DSGNVIKAKSN---------- 160 (692)
Q Consensus 96 ~~l~i~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~--p---~~G~I~~~~~~---------- 160 (692)
..|+++|++++|+++++|+|+||+|++|++++|+|+||||||||+++|+|+++ | ++|+|.++|..
T Consensus 3 ~~l~~~nl~~~~~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~~~~ 82 (252)
T PRK14256 3 NKVKLEQLNVHFGKNHAVKDVSMDFPENSVTAIIGPSGCGKSTVLRSINRMHDLVPSARVTGKILLDDTDIYDRGVDPVS 82 (252)
T ss_pred cEEEEEEEEEEeCCeeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHHhcccCCCCCCCceEEEECCEEcccccCChHH
Confidence 35999999999998889999999999999999999999999999999999986 4 68999998732
Q ss_pred --ceEEEEcccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHH
Q 005532 161 --MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAK 238 (692)
Q Consensus 161 --~~i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (692)
..|+|++|++.+++..|+.+|+...+... . ..+....+.+
T Consensus 83 ~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~---------------~-----------------------~~~~~~~~~~ 124 (252)
T PRK14256 83 IRRRVGMVFQKPNPFPAMSIYDNVIAGYKLN---------------G-----------------------RVNRSEADEI 124 (252)
T ss_pred hhccEEEEecCCCCCCcCcHHHHHHhHHHhc---------------C-----------------------CCCHHHHHHH
Confidence 24999999998877889999985321100 0 0000112234
Q ss_pred HHHHhhhcCCCc---cccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc--CCCeEEEEe
Q 005532 239 VSKLMPELGFTA---DDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVIIS 313 (692)
Q Consensus 239 i~~ll~~lgl~~---~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~--~~~tvI~vs 313 (692)
+.++++.+|+.. ...++.+.+|||||||||+|||||+.+|++|||||||++||+.+++++.++|++ .+.|||+||
T Consensus 125 ~~~~l~~~~l~~~~~~~~~~~~~~LS~G~~qrl~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~tiiivs 204 (252)
T PRK14256 125 VESSLKRVALWDEVKDRLKSNAMELSGGQQQRLCIARTIAVKPEVILMDEPASALDPISTLKIEELIEELKEKYTIIIVT 204 (252)
T ss_pred HHHHHHHcCCchhhhHHhhCCcCcCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCcEEEEE
Confidence 556677777642 235677899999999999999999999999999999999999999999887753 368999999
Q ss_pred cCHHHHHhhcCeEEEEecceEEEeccChHH
Q 005532 314 HDRAFLDQLCTKIVETEMGVSRTYEGNYSQ 343 (692)
Q Consensus 314 Hd~~~l~~~~d~i~~l~~G~~~~~~G~y~~ 343 (692)
|+++++..+||+++++++|++. ..|...+
T Consensus 205 H~~~~~~~~~d~i~~l~~G~i~-~~~~~~~ 233 (252)
T PRK14256 205 HNMQQAARVSDYTAFFYMGDLV-ECGETKK 233 (252)
T ss_pred CCHHHHHhhCCEEEEEECCEEE-EeCCHHH
Confidence 9999999999999999999974 4455443
No 217
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.3e-40 Score=338.76 Aligned_cols=205 Identities=24% Similarity=0.375 Sum_probs=172.4
Q ss_pred EEEEeEEEEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC--------ceEEEEccc
Q 005532 98 VKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN--------MKIAFLSQE 169 (692)
Q Consensus 98 l~i~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~--------~~i~~v~Q~ 169 (692)
|+++|++++|++.. .|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.+ ..++|++|+
T Consensus 2 l~~~~l~~~~~~~~--~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~i~~~~q~ 79 (232)
T PRK10771 2 LKLTDITWLYHHLP--MRFDLTVERGERVAILGPSGAGKSTLLNLIAGFLTPASGSLTLNGQDHTTTPPSRRPVSMLFQE 79 (232)
T ss_pred eEEEEEEEEECCcc--ceeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCeecCcCChhhccEEEEecc
Confidence 78999999998644 38999999999999999999999999999999999999999998743 359999999
Q ss_pred CccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHHhhhcCCC
Q 005532 170 FEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFT 249 (692)
Q Consensus 170 ~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl~ 249 (692)
+.+++..|+.+|+...+... .. .....+.++.++++.+|+.
T Consensus 80 ~~~~~~~tv~e~l~~~~~~~-------------~~--------------------------~~~~~~~~~~~~l~~~~l~ 120 (232)
T PRK10771 80 NNLFSHLTVAQNIGLGLNPG-------------LK--------------------------LNAAQREKLHAIARQMGIE 120 (232)
T ss_pred cccccCCcHHHHHhcccccc-------------cC--------------------------CCHHHHHHHHHHHHHcCcH
Confidence 98877889999985321000 00 0001134566788888986
Q ss_pred ccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc----CCCeEEEEecCHHHHHhhcCe
Q 005532 250 ADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVIISHDRAFLDQLCTK 325 (692)
Q Consensus 250 ~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~----~~~tvI~vsHd~~~l~~~~d~ 325 (692)
...++++.+|||||||||+|||||+.+|++|||||||++||+.+++.+.++|++ .++|||+||||++++..+||+
T Consensus 121 -~~~~~~~~~LS~G~~qrv~laral~~~p~lllLDEP~~gLD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~ 199 (232)
T PRK10771 121 -DLLARLPGQLSGGQRQRVALARCLVREQPILLLDEPFSALDPALRQEMLTLVSQVCQERQLTLLMVSHSLEDAARIAPR 199 (232)
T ss_pred -HHHhCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCE
Confidence 567899999999999999999999999999999999999999999988887643 478999999999999999999
Q ss_pred EEEEecceEEEeccChHHHH
Q 005532 326 IVETEMGVSRTYEGNYSQYV 345 (692)
Q Consensus 326 i~~l~~G~~~~~~G~y~~~~ 345 (692)
|+++++|++. +.|++.++.
T Consensus 200 i~~l~~g~i~-~~g~~~~~~ 218 (232)
T PRK10771 200 SLVVADGRIA-WDGPTDELL 218 (232)
T ss_pred EEEEECCEEE-EeCCHHHHH
Confidence 9999999984 667765543
No 218
>PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.4e-40 Score=353.08 Aligned_cols=208 Identities=24% Similarity=0.347 Sum_probs=171.8
Q ss_pred cEEEEeEEEEeCC----eeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCC----CCccEEEECCCCc-------
Q 005532 97 GVKLENISKSYKG----VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEE----PDSGNVIKAKSNM------- 161 (692)
Q Consensus 97 ~l~i~~ls~~y~~----~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~----p~~G~I~~~~~~~------- 161 (692)
.|+++|+++.|+. .++|+||||+|++||+++|||+||||||||+++|+|+++ |++|+|.++|.+.
T Consensus 3 ~L~v~~l~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTL~~~l~Gll~~~~~~~~G~i~~~G~~i~~~~~~~ 82 (326)
T PRK11022 3 LLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISEKE 82 (326)
T ss_pred eEEEeCeEEEECCCCccEEEEeeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCCCcceEEEECCEECCcCCHHH
Confidence 5899999999976 469999999999999999999999999999999999997 4899999987431
Q ss_pred -------eEEEEcccCc--cCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCc
Q 005532 162 -------KIAFLSQEFE--VSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNL 232 (692)
Q Consensus 162 -------~i~~v~Q~~~--~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (692)
.|+|++|++. +.+..|+.+++...+.. ......
T Consensus 83 ~~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~l~~--------------------------------------~~~~~~ 124 (326)
T PRK11022 83 RRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKV--------------------------------------HQGGNK 124 (326)
T ss_pred HHHHhCCCEEEEecCchhhcCCcCCHHHHHHHHHHH--------------------------------------hcCCCH
Confidence 4999999984 56677888876421100 000111
Q ss_pred ccHHHHHHHHhhhcCCCc--cccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHc----cCC
Q 005532 233 DTLDAKVSKLMPELGFTA--DDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG----KQD 306 (692)
Q Consensus 233 ~~~~~~i~~ll~~lgl~~--~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~----~~~ 306 (692)
.+..+++.++|+.+|+.+ ...++++.+|||||+|||+|||||+.+|+||||||||++||+.++..+.++|+ +.+
T Consensus 125 ~~~~~~~~~~L~~~gL~~~~~~l~~~p~~LSgGq~QRv~iArAL~~~P~llilDEPts~LD~~~~~~il~lL~~l~~~~g 204 (326)
T PRK11022 125 KTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQRVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKEN 204 (326)
T ss_pred HHHHHHHHHHHHHCCCCChHHHHhCCchhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcC
Confidence 223456778899999963 34678899999999999999999999999999999999999999999888764 258
Q ss_pred CeEEEEecCHHHHHhhcCeEEEEecceEEEeccChHH
Q 005532 307 VPMVIISHDRAFLDQLCTKIVETEMGVSRTYEGNYSQ 343 (692)
Q Consensus 307 ~tvI~vsHd~~~l~~~~d~i~~l~~G~~~~~~G~y~~ 343 (692)
.|+|+||||++.+..+||+|++|.+|++. ..|...+
T Consensus 205 ~til~iTHdl~~~~~~adri~vm~~G~iv-e~g~~~~ 240 (326)
T PRK11022 205 MALVLITHDLALVAEAAHKIIVMYAGQVV-ETGKAHD 240 (326)
T ss_pred CEEEEEeCCHHHHHHhCCEEEEEECCEEE-EECCHHH
Confidence 99999999999999999999999999984 4565433
No 219
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=3.2e-40 Score=339.42 Aligned_cols=203 Identities=25% Similarity=0.385 Sum_probs=175.1
Q ss_pred eEEEEeEEEEcCCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccce------------ee
Q 005532 424 VVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL------------PN 491 (692)
Q Consensus 424 ~l~~~~l~~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~~------------~~ 491 (692)
+|+++|+++.|+++.+|+++||+|++||++||+|+||||||||+++|+|+++|++|+|.++|.++. .+
T Consensus 1 ~l~~~~l~~~~~~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~ 80 (240)
T PRK09493 1 MIEFKNVSKHFGPTQVLHNIDLNIDQGEVVVIIGPSGSGKSTLLRCINKLEEITSGDLIVDGLKVNDPKVDERLIRQEAG 80 (240)
T ss_pred CEEEEeEEEEECCeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCChhHHHHhhceE
Confidence 478999999999888999999999999999999999999999999999999999999999986542 24
Q ss_pred eecccchhhcCCCccHHHHHHHHhc---cc----cHHHHHHHHhhcCCCcccccccCCCCCHHHHHHHHHHHHhccCCcE
Q 005532 492 YFEQNQAEALDLDKTVLETVAEAAE---DW----RIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTL 564 (692)
Q Consensus 492 ~~~q~~~~~l~~~~tv~e~~~~~~~---~~----~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~LAral~~~p~l 564 (692)
|++|+ ..+.+..|+.+|+..... .. ....+.++++.+|+. ...++++.+|||||||||+|||||+.+|+|
T Consensus 81 ~~~q~--~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~-~~~~~~~~~LS~G~~qrv~la~al~~~p~l 157 (240)
T PRK09493 81 MVFQQ--FYLFPHLTALENVMFGPLRVRGASKEEAEKQARELLAKVGLA-ERAHHYPSELSGGQQQRVAIARALAVKPKL 157 (240)
T ss_pred EEecc--cccCCCCcHHHHHHhHHHHhcCCCHHHHHHHHHHHHHHcCCh-HHHhcChhhcCHHHHHHHHHHHHHhcCCCE
Confidence 55554 345567899999865321 11 123467899999995 567899999999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhccEEEEEECCEEEEecCChhHHHH
Q 005532 565 LVLDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYYLE 630 (692)
Q Consensus 565 LlLDEPTn~LD~~~~~~l~~~l~~~---~~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~~~~~ 630 (692)
|||||||++||+.+++.+.++|.++ +.|||+||||++++..+||++++|++|++. +.|+++++.+
T Consensus 158 lllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~-~~g~~~~~~~ 225 (240)
T PRK09493 158 MLFDEPTSALDPELRHEVLKVMQDLAEEGMTMVIVTHEIGFAEKVASRLIFIDKGRIA-EDGDPQVLIK 225 (240)
T ss_pred EEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEE-eeCCHHHHhc
Confidence 9999999999999999999999765 469999999999999999999999999998 4577776644
No 220
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.
Probab=100.00 E-value=2.8e-40 Score=336.95 Aligned_cols=197 Identities=26% Similarity=0.449 Sum_probs=167.1
Q ss_pred eEEEEeEEEEcCCe----ecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccce----------
Q 005532 424 VVTIKNLEFGYEDR----LLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL---------- 489 (692)
Q Consensus 424 ~l~~~~l~~~y~~~----~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~~---------- 489 (692)
+|+++||++.|+++ ++|+++||+|++|+++||+||||||||||+++|+|+++|++|+|.++|.++.
T Consensus 1 ~l~~~~v~~~~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 80 (228)
T cd03257 1 LLEVKNLSVSFPTGGGSVKALDDVSFSIKKGETLGLVGESGSGKSTLARAILGLLKPTSGSIIFDGKDLLKLSRRLRKIR 80 (228)
T ss_pred CeEEEeeeEeccCCCcceeeecCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccchhhHHHh
Confidence 47899999999865 7999999999999999999999999999999999999999999999886541
Q ss_pred ---eeeecccchhhcCCCccHHHHHHHHhcc----ccH---HH-HHHHHhhcCCCcccccccCCCCCHHHHHHHHHHHHh
Q 005532 490 ---PNYFEQNQAEALDLDKTVLETVAEAAED----WRI---DD-IKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFM 558 (692)
Q Consensus 490 ---~~~~~q~~~~~l~~~~tv~e~~~~~~~~----~~~---~~-~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~LAral 558 (692)
.+|++|+....+.+..|+.+|+...... ... .. +.++++.+++.....++++.+|||||||||+|||||
T Consensus 81 ~~~i~~~~q~~~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LS~G~~qrv~laral 160 (228)
T cd03257 81 RKEIQMVFQDPMSSLNPRMTIGEQIAEPLRIHGKLSKKEARKEAVLLLLVGVGLPEEVLNRYPHELSGGQRQRVAIARAL 160 (228)
T ss_pred hccEEEEecCchhhcCCcCCHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHCCCChhHhhCCchhcCHHHHHHHHHHHHH
Confidence 3456665422355678999998653211 111 12 247889999854567889999999999999999999
Q ss_pred ccCCcEEEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEECCEEEE
Q 005532 559 VKPSTLLVLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQD 620 (692)
Q Consensus 559 ~~~p~lLlLDEPTn~LD~~~~~~l~~~l~~~----~~tviivSHd~~~l~~~~d~i~~l~~g~l~~ 620 (692)
+.+|+||||||||++||+.+++.+.+.|+++ +.|||+||||++++..+||+|++|++|++..
T Consensus 161 ~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~ 226 (228)
T cd03257 161 ALNPKLLIADEPTSALDVSVQAQILDLLKKLQEELGLTLLFITHDLGVVAKIADRVAVMYAGKIVE 226 (228)
T ss_pred hcCCCEEEecCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEeCCEEEe
Confidence 9999999999999999999999999999765 4699999999999999999999999999864
No 221
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.5e-40 Score=347.35 Aligned_cols=207 Identities=24% Similarity=0.371 Sum_probs=173.9
Q ss_pred CcEEEEeEEEEeCC--eeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC----------ceE
Q 005532 96 SGVKLENISKSYKG--VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN----------MKI 163 (692)
Q Consensus 96 ~~l~i~~ls~~y~~--~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~----------~~i 163 (692)
++|+++|+++.|++ +++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.. ..|
T Consensus 4 ~~l~~~~l~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~p~~G~i~~~g~~i~~~~~~~~~~~i 83 (279)
T PRK13635 4 EIIRVEHISFRYPDAATYALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLLPEAGTITVGGMVLSEETVWDVRRQV 83 (279)
T ss_pred ceEEEEEEEEEeCCCCccceeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHhhhe
Confidence 46999999999975 469999999999999999999999999999999999999999999998743 259
Q ss_pred EEEcccCc-cCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHH
Q 005532 164 AFLSQEFE-VSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKL 242 (692)
Q Consensus 164 ~~v~Q~~~-~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l 242 (692)
+|++|++. .++..||.+|+...... . .........++.++
T Consensus 84 ~~~~q~~~~~~~~~tv~enl~~~~~~---------------~------------------------~~~~~~~~~~~~~~ 124 (279)
T PRK13635 84 GMVFQNPDNQFVGATVQDDVAFGLEN---------------I------------------------GVPREEMVERVDQA 124 (279)
T ss_pred EEEEeCHHHhcccccHHHHHhhhHhh---------------C------------------------CCCHHHHHHHHHHH
Confidence 99999984 55678999998532100 0 00111223456778
Q ss_pred hhhcCCCccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc----CCCeEEEEecCHHH
Q 005532 243 MPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVIISHDRAF 318 (692)
Q Consensus 243 l~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~----~~~tvI~vsHd~~~ 318 (692)
++.+|+. ...++++.+|||||||||+|||||+.+|+||||||||++||+.++.++.++|++ .+.|||+||||+++
T Consensus 125 l~~~gL~-~~~~~~~~~LS~G~~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~~~~tilivsH~~~~ 203 (279)
T PRK13635 125 LRQVGME-DFLNREPHRLSGGQKQRVAIAGVLALQPDIIILDEATSMLDPRGRREVLETVRQLKEQKGITVLSITHDLDE 203 (279)
T ss_pred HHHcCCh-hhhhCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCCEEEEEecCHHH
Confidence 8888986 578889999999999999999999999999999999999999999999887753 38999999999999
Q ss_pred HHhhcCeEEEEecceEEEeccChHHH
Q 005532 319 LDQLCTKIVETEMGVSRTYEGNYSQY 344 (692)
Q Consensus 319 l~~~~d~i~~l~~G~~~~~~G~y~~~ 344 (692)
+.. ||+|+++++|++ .+.|...++
T Consensus 204 ~~~-~d~i~~l~~G~i-~~~g~~~~~ 227 (279)
T PRK13635 204 AAQ-ADRVIVMNKGEI-LEEGTPEEI 227 (279)
T ss_pred HHc-CCEEEEEECCEE-EEECCHHHH
Confidence 975 999999999997 466776544
No 222
>TIGR03719 ABC_ABC_ChvD ATP-binding cassette protein, ChvD family. Members of this protein family have two copies of the ABC transporter ATP-binding cassette, but are found outside the common ABC transporter operon structure that features integral membrane permease proteins and substrate-binding proteins encoded next to the ATP-binding cassette (ABC domain) protein. The member protein ChvD from Agrobacterium tumefaciens was identified as both a candidate to interact with VirB8, based on yeast two-hybrid analysis, and as an apparent regulator of VirG. The general function of this protein family is unknown.
Probab=100.00 E-value=1.1e-39 Score=373.95 Aligned_cols=207 Identities=32% Similarity=0.542 Sum_probs=180.1
Q ss_pred ceEEEEeEEEEcC-CeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccceeeeecccchhhc
Q 005532 423 SVVTIKNLEFGYE-DRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQNQAEAL 501 (692)
Q Consensus 423 ~~l~~~~l~~~y~-~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~~~~~~~q~~~~~l 501 (692)
.+|+++||+++|+ ++++|+|+||+|++|+++||+|||||||||||++|+|+++|++|+|.+++. ...+|++|+. .+
T Consensus 3 ~~i~~~nls~~~~~~~~il~~is~~i~~Ge~~~liG~NGsGKSTLl~~i~G~~~p~~G~i~~~~~-~~i~~v~Q~~--~~ 79 (552)
T TIGR03719 3 YIYTMNRVSKVVPPKKEILKDISLSFFPGAKIGVLGLNGAGKSTLLRIMAGVDKEFNGEARPAPG-IKVGYLPQEP--QL 79 (552)
T ss_pred EEEEEeeEEEecCCCCeeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEecCC-CEEEEEeccC--CC
Confidence 4799999999998 778999999999999999999999999999999999999999999998753 4567888764 45
Q ss_pred CCCccHHHHHHHHhc-----------------cc-c------------------------HHHHHHHHhhcCCCcccccc
Q 005532 502 DLDKTVLETVAEAAE-----------------DW-R------------------------IDDIKGLLGRCNFKADMLDR 539 (692)
Q Consensus 502 ~~~~tv~e~~~~~~~-----------------~~-~------------------------~~~~~~~L~~~~l~~~~~~~ 539 (692)
.+..|+.+|+..... .. . ...+..+++.+|+. . .++
T Consensus 80 ~~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~-~~~ 157 (552)
T TIGR03719 80 DPTKTVRENVEEGVAEIKDALDRFNEISAKFAEPDADMDALLAEQAELQEIIDAADAWDLDRKLEIAMDALRCP-P-WDA 157 (552)
T ss_pred CCCCcHHHHHHHhhHHHHHHHHHHHHHHHHhccCchhhHHHHHHHHHHHHHHHhcCcchhHHHHHHHHhhCCCC-c-ccC
Confidence 567899999864210 00 0 02345577788884 2 588
Q ss_pred cCCCCCHHHHHHHHHHHHhccCCcEEEEeCCCCCCCHHHHHHHHHHHHhcCceEEEEecCHHHHHhhccEEEEEECCEEE
Q 005532 540 KVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEYKGTVITVSHDRYFVKQIVNRVVEVKGSNLQ 619 (692)
Q Consensus 540 ~~~~LSgGqkqrv~LAral~~~p~lLlLDEPTn~LD~~~~~~l~~~l~~~~~tviivSHd~~~l~~~~d~i~~l~~g~l~ 619 (692)
++.+|||||||||+|||+|+.+|+||||||||||||+.++++|.+.|.++++|||+||||++++..+||+|++|++|++.
T Consensus 158 ~~~~LSgGqkqrv~la~al~~~p~lLLLDEPt~~LD~~~~~~l~~~L~~~~~tvIiisHd~~~~~~~~d~v~~l~~g~i~ 237 (552)
T TIGR03719 158 DVTKLSGGERRRVALCRLLLSKPDMLLLDEPTNHLDAESVAWLEQHLQEYPGTVVAVTHDRYFLDNVAGWILELDRGRGI 237 (552)
T ss_pred chhhcCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCChHHHHHHHHHHHhCCCeEEEEeCCHHHHHhhcCeEEEEECCEEE
Confidence 99999999999999999999999999999999999999999999999999889999999999999999999999999998
Q ss_pred EecCChhHHHHHhHH
Q 005532 620 DYAGDYNYYLEKNLD 634 (692)
Q Consensus 620 ~~~g~~~~~~~~~~~ 634 (692)
.|.|+|++|.+++..
T Consensus 238 ~~~g~~~~~~~~~~~ 252 (552)
T TIGR03719 238 PWEGNYSSWLEQKEK 252 (552)
T ss_pred EecCCHHHHHHHHHH
Confidence 899999999886543
No 223
>PRK13543 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=2.1e-40 Score=334.93 Aligned_cols=193 Identities=23% Similarity=0.316 Sum_probs=165.9
Q ss_pred CcEEEEeEEEEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCCc-------eEEEEcc
Q 005532 96 SGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSNM-------KIAFLSQ 168 (692)
Q Consensus 96 ~~l~i~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~~-------~i~~v~Q 168 (692)
++|+++|++++|+++++|+++||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|... .++|++|
T Consensus 10 ~~l~~~~l~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~i~~~~~~~~i~~~~q 89 (214)
T PRK13543 10 PLLAAHALAFSRNEEPVFGPLDFHVDAGEALLVQGDNGAGKTTLLRVLAGLLHVESGQIQIDGKTATRGDRSRFMAYLGH 89 (214)
T ss_pred ceEEEeeEEEecCCceeeecceEEECCCCEEEEEcCCCCCHHHHHHHHhCCCCCCCeeEEECCEEccchhhhhceEEeec
Confidence 469999999999988899999999999999999999999999999999999999999999987432 4999999
Q ss_pred cCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHHhhhcCC
Q 005532 169 EFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGF 248 (692)
Q Consensus 169 ~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl 248 (692)
++.+++..|+.+|+..... +. ....+..+.++++.+|+
T Consensus 90 ~~~~~~~~t~~e~l~~~~~---------------~~---------------------------~~~~~~~~~~~l~~~~l 127 (214)
T PRK13543 90 LPGLKADLSTLENLHFLCG---------------LH---------------------------GRRAKQMPGSALAIVGL 127 (214)
T ss_pred CcccccCCcHHHHHHHHHH---------------hc---------------------------CCcHHHHHHHHHHHcCC
Confidence 9887777899999742110 00 00112345567788888
Q ss_pred CccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHc---cCCCeEEEEecCHHHHHhhcCe
Q 005532 249 TADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG---KQDVPMVIISHDRAFLDQLCTK 325 (692)
Q Consensus 249 ~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~---~~~~tvI~vsHd~~~l~~~~d~ 325 (692)
. ...++++.+|||||||||+|||||+.+|++|||||||++||+.+++++.++|+ +.+.|||++|||++++.++||+
T Consensus 128 ~-~~~~~~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~~~ 206 (214)
T PRK13543 128 A-GYEDTLVRQLSAGQKKRLALARLWLSPAPLWLLDEPYANLDLEGITLVNRMISAHLRGGGAALVTTHGAYAAPPVRTR 206 (214)
T ss_pred h-hhccCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecChhhhhhhcce
Confidence 6 45788899999999999999999999999999999999999999999988775 3589999999999999999999
Q ss_pred EEEEec
Q 005532 326 IVETEM 331 (692)
Q Consensus 326 i~~l~~ 331 (692)
+++++.
T Consensus 207 i~~l~~ 212 (214)
T PRK13543 207 MLTLEA 212 (214)
T ss_pred EEEEee
Confidence 998863
No 224
>PRK13639 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.5e-40 Score=345.76 Aligned_cols=207 Identities=23% Similarity=0.356 Sum_probs=172.5
Q ss_pred cEEEEeEEEEeCC-eeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC------------ceE
Q 005532 97 GVKLENISKSYKG-VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN------------MKI 163 (692)
Q Consensus 97 ~l~i~~ls~~y~~-~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~------------~~i 163 (692)
+|+++|++++|++ .++|+|+||+|.+||+++|+||||||||||+++|+|+++|++|+|.++|.. ..|
T Consensus 1 ~l~~~~l~~~~~~~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~i 80 (275)
T PRK13639 1 ILETRDLKYSYPDGTEALKGINFKAEKGEMVALLGPNGAGKSTLFLHFNGILKPTSGEVLIKGEPIKYDKKSLLEVRKTV 80 (275)
T ss_pred CEEEEEEEEEeCCCCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCEECccccchHHHHHhhe
Confidence 3789999999974 579999999999999999999999999999999999999999999998743 248
Q ss_pred EEEcccCc-cCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHH
Q 005532 164 AFLSQEFE-VSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKL 242 (692)
Q Consensus 164 ~~v~Q~~~-~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l 242 (692)
+|++|++. .++..||.+|+...... . .........++.++
T Consensus 81 ~~v~q~~~~~~~~~tv~e~i~~~~~~----------------~-----------------------~~~~~~~~~~~~~~ 121 (275)
T PRK13639 81 GIVFQNPDDQLFAPTVEEDVAFGPLN----------------L-----------------------GLSKEEVEKRVKEA 121 (275)
T ss_pred EEEeeChhhhhccccHHHHHHHHHHH----------------c-----------------------CCCHHHHHHHHHHH
Confidence 99999973 33557999998521100 0 00011223456678
Q ss_pred hhhcCCCccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc---CCCeEEEEecCHHHH
Q 005532 243 MPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK---QDVPMVIISHDRAFL 319 (692)
Q Consensus 243 l~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~---~~~tvI~vsHd~~~l 319 (692)
++.+|+. ...++++.+|||||+||++|||||+.+|+||||||||++||+.++.++.++|++ .+.|||+||||++++
T Consensus 122 l~~~~L~-~~~~~~~~~LS~Gq~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~~til~vtH~~~~~ 200 (275)
T PRK13639 122 LKAVGME-GFENKPPHHLSGGQKKRVAIAGILAMKPEIIVLDEPTSGLDPMGASQIMKLLYDLNKEGITIIISTHDVDLV 200 (275)
T ss_pred HHHCCCc-hhhcCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHH
Confidence 8889986 567899999999999999999999999999999999999999999999887753 489999999999999
Q ss_pred HhhcCeEEEEecceEEEeccChHHH
Q 005532 320 DQLCTKIVETEMGVSRTYEGNYSQY 344 (692)
Q Consensus 320 ~~~~d~i~~l~~G~~~~~~G~y~~~ 344 (692)
..+||+|+++++|++. ..|..+++
T Consensus 201 ~~~~d~i~~l~~G~i~-~~g~~~~~ 224 (275)
T PRK13639 201 PVYADKVYVMSDGKII-KEGTPKEV 224 (275)
T ss_pred HHhCCEEEEEECCEEE-EeCCHHHH
Confidence 9999999999999984 56776544
No 225
>PRK00635 excinuclease ABC subunit A; Provisional
Probab=100.00 E-value=9.7e-39 Score=390.77 Aligned_cols=185 Identities=23% Similarity=0.297 Sum_probs=131.4
Q ss_pred cHHHHHHHHhhhcCCCccccccccccCChHHHHHHHHHHHHc---cCCCeEEEcCCCCCCCHHHHHHHHHHHc---cCCC
Q 005532 234 TLDAKVSKLMPELGFTADDGDRLVASFSSGWQMRMSLGKILL---QDPDLLLLDEPTNHLDLDTIEWLEGYLG---KQDV 307 (692)
Q Consensus 234 ~~~~~i~~ll~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~---~~p~lLLLDEPts~LD~~~~~~L~~~L~---~~~~ 307 (692)
.+.+++ ++|+.+|+.....++++.+|||||+|||+||+||+ .+|++|||||||+|||+.+++.|.++|+ +.|.
T Consensus 785 ~i~~~l-~~L~~vGL~~l~l~q~~~tLSGGE~QRV~LAraL~~~~~~P~LLILDEPTsGLD~~~~~~Ll~lL~~L~~~G~ 863 (1809)
T PRK00635 785 SIHEKI-HALCSLGLDYLPLGRPLSSLSGGEIQRLKLAYELLAPSKKPTLYVLDEPTTGLHTHDIKALIYVLQSLTHQGH 863 (1809)
T ss_pred HHHHHH-HHHHHcCCcchhhcCccccCCHHHHHHHHHHHHHhhcCCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCC
Confidence 445566 57888999632368999999999999999999997 6999999999999999999999988764 4689
Q ss_pred eEEEEecCHHHHHhhcCeEEEEe------cceEEEeccChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCc
Q 005532 308 PMVIISHDRAFLDQLCTKIVETE------MGVSRTYEGNYSQYVLEKAAWIESQYAAWEKQQREIEQTKDLINRLGAGAN 381 (692)
Q Consensus 308 tvI~vsHd~~~l~~~~d~i~~l~------~G~~~~~~G~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~ 381 (692)
|||+|||+++++ .+||+|++|. +|++ .+.|...++...... .. ..+...+...
T Consensus 864 TVIiIsHdl~~i-~~aDrVi~L~p~gg~~~G~i-v~~Gtpeel~~~~s~-----t~---------~~l~~~l~~~----- 922 (1809)
T PRK00635 864 TVVIIEHNMHVV-KVADYVLELGPEGGNLGGYL-LASCSPEELIHLHTP-----TA---------KALRPYLSSP----- 922 (1809)
T ss_pred EEEEEeCCHHHH-HhCCEEEEEccCCCCCCCEE-EEeCCHHHHHhccCc-----hH---------HHHHHHhhcc-----
Confidence 999999999999 7999999995 5665 466765443210000 00 0000000000
Q ss_pred chhhhHHHHHHHHHHHHhhhcccccccceeeecCCCCCCCCceEEEEeEEEEcCCeecccceeEEEeCCCEEEEEcCCCC
Q 005532 382 SGRASSAEKKLERLQEEEQIEKPFQRKQMKIRFPERGRSGRSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGC 461 (692)
Q Consensus 382 ~~~~~~~~~~l~rl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~y~~~~~l~~isl~i~~Ge~v~lvG~NGs 461 (692)
. ..+ .+. |+.. .. +...++++.+.....|++++|+|++|++++|+|+|||
T Consensus 923 --------------~-----~~~------~~~-~~~~---~~-l~~~~i~i~~~~~~~lk~isl~i~~gei~~itG~nGs 972 (1809)
T PRK00635 923 --------------Q-----ELP------YLP-DPSP---KP-PVPADITIKNAYQHNLKHIDLSLPRNALTAVTGPSAS 972 (1809)
T ss_pred --------------c-----ccc------ccc-cccc---cc-cccceEEEeccccccccceeEEecCCcEEEEECCCCC
Confidence 0 000 000 1100 11 4455667776655679999999999999999999999
Q ss_pred cHHHHHHHH
Q 005532 462 GKSTLLKLI 470 (692)
Q Consensus 462 GKSTLl~~L 470 (692)
|||||+..+
T Consensus 973 GKStL~~~~ 981 (1809)
T PRK00635 973 GKHSLVFDI 981 (1809)
T ss_pred ChhHHHHHH
Confidence 999977655
No 226
>PRK14248 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.5e-40 Score=343.79 Aligned_cols=209 Identities=21% Similarity=0.284 Sum_probs=168.1
Q ss_pred CCcEEEEeEEEEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCC-----CCccEEEECCCC---------
Q 005532 95 SSGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEE-----PDSGNVIKAKSN--------- 160 (692)
Q Consensus 95 ~~~l~i~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~-----p~~G~I~~~~~~--------- 160 (692)
.++|+++|++++|+++++|+|+||+|++|++++|+|+||||||||+++|+|+++ |++|+|.++|..
T Consensus 19 ~~~l~~~~l~~~~~~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 98 (268)
T PRK14248 19 EHILEVKDLSIYYGEKRAVNDISMDIEKHAVTALIGPSGCGKSTFLRSINRMNDLIPSARSEGEILYEGLNILDSNINVV 98 (268)
T ss_pred CceEEEEEEEEEeCCceeeeceEEEEcCCCEEEEECCCCCCHHHHHHHHHhcccccCCCCCceEEEECCEEcccccccHH
Confidence 346999999999998889999999999999999999999999999999999864 789999987632
Q ss_pred ---ceEEEEcccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHH
Q 005532 161 ---MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDA 237 (692)
Q Consensus 161 ---~~i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (692)
..|+|++|++.++. .|+.+|+...+... .. ......+.
T Consensus 99 ~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~---------------~~-----------------------~~~~~~~~ 139 (268)
T PRK14248 99 NLRREIGMVFQKPNPFP-KSIYNNITHALKYA---------------GE-----------------------RRKSVLDE 139 (268)
T ss_pred HHhccEEEEecCCccCc-ccHHHHHHHHHHhc---------------CC-----------------------CcHHHHHH
Confidence 25999999988765 59999985321100 00 00001122
Q ss_pred HHHHHhhhcCCCc---cccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc--CCCeEEEE
Q 005532 238 KVSKLMPELGFTA---DDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVII 312 (692)
Q Consensus 238 ~i~~ll~~lgl~~---~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~--~~~tvI~v 312 (692)
.+.+++..+++.. ...++++.+||||||||++|||||+.+|++|||||||+|||+.+++++.++|++ .+.|||++
T Consensus 140 ~~~~~l~~~~l~~~~~~~~~~~~~~LSgGq~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~ 219 (268)
T PRK14248 140 IVEESLTKAALWDEVKDRLHSSALSLSGGQQQRLCIARTLAMKPAVLLLDEPASALDPISNAKIEELITELKEEYSIIIV 219 (268)
T ss_pred HHHHHHHHcCCCcchHHHHhcCcccCCHHHHHHHHHHHHHhCCCCEEEEcCCCcccCHHHHHHHHHHHHHHhcCCEEEEE
Confidence 3444555556531 245778999999999999999999999999999999999999999999888754 36899999
Q ss_pred ecCHHHHHhhcCeEEEEecceEEEeccChHH
Q 005532 313 SHDRAFLDQLCTKIVETEMGVSRTYEGNYSQ 343 (692)
Q Consensus 313 sHd~~~l~~~~d~i~~l~~G~~~~~~G~y~~ 343 (692)
|||++++..+||+|++|++|++. +.|...+
T Consensus 220 tH~~~~~~~~~d~v~~l~~G~i~-~~~~~~~ 249 (268)
T PRK14248 220 THNMQQALRVSDRTAFFLNGDLV-EYDQTEQ 249 (268)
T ss_pred EeCHHHHHHhCCEEEEEECCEEE-EeCCHHH
Confidence 99999999999999999999984 5566543
No 227
>cd03300 ABC_PotA_N PotA is an ABC-type transporter and the ATPase component of the spermidine/putrescine-preferential uptake system consisting of PotA, -B, -C, and -D. PotA has two domains with the N-terminal domain containing the ATPase activity and the residues required for homodimerization with PotA and heterdimerization with PotB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.8e-40 Score=337.11 Aligned_cols=204 Identities=27% Similarity=0.431 Sum_probs=173.5
Q ss_pred EEEEeEEEEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC--------ceEEEEccc
Q 005532 98 VKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN--------MKIAFLSQE 169 (692)
Q Consensus 98 l~i~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~--------~~i~~v~Q~ 169 (692)
|.++|++++|+++++|+|+||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|.+ ..++|++|+
T Consensus 1 l~~~~l~~~~~~~~il~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~i~~~~q~ 80 (232)
T cd03300 1 IELENVSKFYGGFVALDGVSLDIKEGEFFTLLGPSGCGKTTLLRLIAGFETPTSGEILLDGKDITNLPPHKRPVNTVFQN 80 (232)
T ss_pred CEEEeEEEEeCCeeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCChhhcceEEEecc
Confidence 468999999998899999999999999999999999999999999999999999999998742 369999999
Q ss_pred CccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHHhhhcCCC
Q 005532 170 FEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFT 249 (692)
Q Consensus 170 ~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl~ 249 (692)
+.++...|+.+|+...+.. . ....+...+++..+++.+|+.
T Consensus 81 ~~~~~~~t~~~nl~~~~~~---------------~------------------------~~~~~~~~~~~~~~l~~~~l~ 121 (232)
T cd03300 81 YALFPHLTVFENIAFGLRL---------------K------------------------KLPKAEIKERVAEALDLVQLE 121 (232)
T ss_pred cccCCCCcHHHHHHHHHHh---------------c------------------------CCCHHHHHHHHHHHHHHcCCc
Confidence 9887778999997532110 0 001112234566788888996
Q ss_pred ccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc----CCCeEEEEecCHHHHHhhcCe
Q 005532 250 ADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVIISHDRAFLDQLCTK 325 (692)
Q Consensus 250 ~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~----~~~tvI~vsHd~~~l~~~~d~ 325 (692)
+..++.+.+|||||+|||+|||||+.+|++|||||||++||+.+++++.+.|++ .+.|||++||+++++..+||+
T Consensus 122 -~~~~~~~~~lS~G~~qrl~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sh~~~~~~~~~d~ 200 (232)
T cd03300 122 -GYANRKPSQLSGGQQQRVAIARALVNEPKVLLLDEPLGALDLKLRKDMQLELKRLQKELGITFVFVTHDQEEALTMSDR 200 (232)
T ss_pred -hhhcCChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCE
Confidence 567888999999999999999999999999999999999999999999887753 489999999999999999999
Q ss_pred EEEEecceEEEeccChH
Q 005532 326 IVETEMGVSRTYEGNYS 342 (692)
Q Consensus 326 i~~l~~G~~~~~~G~y~ 342 (692)
|+++++|++. +.|...
T Consensus 201 i~~l~~G~~~-~~~~~~ 216 (232)
T cd03300 201 IAVMNKGKIQ-QIGTPE 216 (232)
T ss_pred EEEEECCEEE-ecCCHH
Confidence 9999999985 455543
No 228
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=100.00 E-value=4.7e-40 Score=341.58 Aligned_cols=206 Identities=23% Similarity=0.352 Sum_probs=175.7
Q ss_pred CceEEEEeEEEEcCCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccce------------
Q 005532 422 RSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL------------ 489 (692)
Q Consensus 422 ~~~l~~~~l~~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~~------------ 489 (692)
+..|+++||++.|+++.+|+++||+|++||++||+|+||||||||+++|+|+++|++|+|.++|.++.
T Consensus 3 ~~~l~~~~l~~~~~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 82 (257)
T PRK10619 3 ENKLNVIDLHKRYGEHEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPSEGSIVVNGQTINLVRDKDGQLKVA 82 (257)
T ss_pred CccEEEeeeEEEECCEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcccccccccccccc
Confidence 34699999999999889999999999999999999999999999999999999999999999986542
Q ss_pred -----------eeeecccchhhcCCCccHHHHHHHHhc---cc----cHHHHHHHHhhcCCCcccccccCCCCCHHHHHH
Q 005532 490 -----------PNYFEQNQAEALDLDKTVLETVAEAAE---DW----RIDDIKGLLGRCNFKADMLDRKVSLLSGGEKAR 551 (692)
Q Consensus 490 -----------~~~~~q~~~~~l~~~~tv~e~~~~~~~---~~----~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqr 551 (692)
.+|++|+ ..+.+..|+.+|+..... .. ....+.++++.+|+.....++++.+||||||||
T Consensus 83 ~~~~~~~~~~~i~~v~q~--~~l~~~~sv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LS~G~~qr 160 (257)
T PRK10619 83 DKNQLRLLRTRLTMVFQH--FNLWSHMTVLENVMEAPIQVLGLSKQEARERAVKYLAKVGIDERAQGKYPVHLSGGQQQR 160 (257)
T ss_pred cchHHHHHhhceEEEecC--cccCCCCcHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCChhhhhCCcccCCHHHHHH
Confidence 3455554 345567899999864321 11 123577899999996433478899999999999
Q ss_pred HHHHHHhccCCcEEEEeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhccEEEEEECCEEEEecCChhHH
Q 005532 552 LAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYY 628 (692)
Q Consensus 552 v~LAral~~~p~lLlLDEPTn~LD~~~~~~l~~~l~~~---~~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~~~ 628 (692)
|+|||||+.+|+||||||||++||+.+++.+.+.|+++ +.|||+||||++++..+||||++|++|+++. .|+++++
T Consensus 161 v~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsH~~~~~~~~~d~i~~l~~G~i~~-~~~~~~~ 239 (257)
T PRK10619 161 VSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAEEGKTMVVVTHEMGFARHVSSHVIFLHQGKIEE-EGAPEQL 239 (257)
T ss_pred HHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEE-eCCHHHh
Confidence 99999999999999999999999999999999998765 4699999999999999999999999999984 5777766
Q ss_pred HH
Q 005532 629 LE 630 (692)
Q Consensus 629 ~~ 630 (692)
..
T Consensus 240 ~~ 241 (257)
T PRK10619 240 FG 241 (257)
T ss_pred hh
Confidence 43
No 229
>PRK10247 putative ABC transporter ATP-binding protein YbbL; Provisional
Probab=100.00 E-value=2e-40 Score=337.64 Aligned_cols=192 Identities=21% Similarity=0.339 Sum_probs=163.0
Q ss_pred CcEEEEeEEEEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC----------ceEEE
Q 005532 96 SGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN----------MKIAF 165 (692)
Q Consensus 96 ~~l~i~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~----------~~i~~ 165 (692)
++|+++|+++.|+++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.. ..++|
T Consensus 6 ~~i~~~~l~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 85 (225)
T PRK10247 6 PLLQLQNVGYLAGDAKILNNISFSLRAGEFKLITGPSGCGKSTLLKIVASLISPTSGTLLFEGEDISTLKPEIYRQQVSY 85 (225)
T ss_pred ceEEEeccEEeeCCceeeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEcCcCCHHHHHhccEE
Confidence 36999999999998889999999999999999999999999999999999999999999998742 35999
Q ss_pred EcccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHHhhh
Q 005532 166 LSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPE 245 (692)
Q Consensus 166 v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~ 245 (692)
++|++.++. .|+.||+..... +. .......++.++++.
T Consensus 86 ~~q~~~l~~-~tv~enl~~~~~---------------~~--------------------------~~~~~~~~~~~~l~~ 123 (225)
T PRK10247 86 CAQTPTLFG-DTVYDNLIFPWQ---------------IR--------------------------NQQPDPAIFLDDLER 123 (225)
T ss_pred Eeccccccc-ccHHHHHHhHHh---------------hc--------------------------CCChHHHHHHHHHHH
Confidence 999988765 599999752100 00 000012345577888
Q ss_pred cCCCccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc----CCCeEEEEecCHHHHHh
Q 005532 246 LGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVIISHDRAFLDQ 321 (692)
Q Consensus 246 lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~----~~~tvI~vsHd~~~l~~ 321 (692)
+|+.+...++++.+|||||+|||+|||||+.+|++|||||||++||+.+++++.++|++ .+.|||+||||++++.
T Consensus 124 ~~l~~~~~~~~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvii~sh~~~~~~- 202 (225)
T PRK10247 124 FALPDTILTKNIAELSGGEKQRISLIRNLQFMPKVLLLDEITSALDESNKHNVNEIIHRYVREQNIAVLWVTHDKDEIN- 202 (225)
T ss_pred cCCChHHhcCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECChHHHH-
Confidence 88864467889999999999999999999999999999999999999999999887753 4889999999999996
Q ss_pred hcCeEEEEe
Q 005532 322 LCTKIVETE 330 (692)
Q Consensus 322 ~~d~i~~l~ 330 (692)
.||++++++
T Consensus 203 ~~d~i~~l~ 211 (225)
T PRK10247 203 HADKVITLQ 211 (225)
T ss_pred hCCEEEEEe
Confidence 699999996
No 230
>TIGR03740 galliderm_ABC gallidermin-class lantibiotic protection ABC transporter, ATP-binding subunit. Model TIGR03731 represents the family of all lantibiotics related to gallidermin, including epidermin, mutatin, and nisin. This protein family describes the ATP-binding subunit of a gallidermin/epidermin class lantibiotic protection transporter. It is largely restricted to gallidermin-family lantibiotic biosynthesis and export cassettes, but also occurs in orphan transporter cassettes in species that lack candidate lantibiotic precursor and synthetase genes.
Probab=100.00 E-value=4.5e-40 Score=334.54 Aligned_cols=198 Identities=31% Similarity=0.461 Sum_probs=170.3
Q ss_pred EEEEeEEEEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC------ceEEEEcccCc
Q 005532 98 VKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN------MKIAFLSQEFE 171 (692)
Q Consensus 98 l~i~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~------~~i~~v~Q~~~ 171 (692)
|+++|++++|+++++|+|+||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|.. ..++|++|++.
T Consensus 1 l~l~~v~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~~~~~~~~~~~~~~~~~q~~~ 80 (223)
T TIGR03740 1 LETKNLSKRFGKQTAVNNISLTVPKNSVYGLLGPNGAGKSTLLKMITGILRPTSGEIIFDGHPWTRKDLHKIGSLIESPP 80 (223)
T ss_pred CEEEeEEEEECCEEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEeccccccccEEEEcCCCC
Confidence 468999999998889999999999999999999999999999999999999999999998742 36999999998
Q ss_pred cCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHHhhhcCCCcc
Q 005532 172 VSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFTAD 251 (692)
Q Consensus 172 ~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl~~~ 251 (692)
+++..|+++|+..... +. .. ...++.++++.+|+. .
T Consensus 81 ~~~~~t~~~~~~~~~~---------------~~------------------------~~----~~~~~~~~l~~~~l~-~ 116 (223)
T TIGR03740 81 LYENLTARENLKVHTT---------------LL------------------------GL----PDSRIDEVLNIVDLT-N 116 (223)
T ss_pred ccccCCHHHHHHHHHH---------------Hc------------------------CC----CHHHHHHHHHHcCCc-H
Confidence 8778899999742110 00 00 023456778888886 5
Q ss_pred ccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHc---cCCCeEEEEecCHHHHHhhcCeEEE
Q 005532 252 DGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG---KQDVPMVIISHDRAFLDQLCTKIVE 328 (692)
Q Consensus 252 ~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~---~~~~tvI~vsHd~~~l~~~~d~i~~ 328 (692)
..++++.+|||||+||++|||||+.+|++|||||||++||+.+++.+.++|+ +.+.|||++|||++++..+||+|++
T Consensus 117 ~~~~~~~~LS~G~~~rv~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~~~~tiii~sH~~~~~~~~~d~i~~ 196 (223)
T TIGR03740 117 TGKKKAKQFSLGMKQRLGIAIALLNHPKLLILDEPTNGLDPIGIQELRELIRSFPEQGITVILSSHILSEVQQLADHIGI 196 (223)
T ss_pred HHhhhHhhCCHHHHHHHHHHHHHhcCCCEEEECCCccCCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHHhcCEEEE
Confidence 6788899999999999999999999999999999999999999999988775 3478999999999999999999999
Q ss_pred EecceEEEeccC
Q 005532 329 TEMGVSRTYEGN 340 (692)
Q Consensus 329 l~~G~~~~~~G~ 340 (692)
+++|++. ..|.
T Consensus 197 l~~g~i~-~~~~ 207 (223)
T TIGR03740 197 ISEGVLG-YQGK 207 (223)
T ss_pred EeCCEEE-EecC
Confidence 9999974 4454
No 231
>COG4555 NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.1e-41 Score=319.32 Aligned_cols=201 Identities=27% Similarity=0.388 Sum_probs=174.8
Q ss_pred eEEEEeEEEEcCCee-cccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccce---------eeee
Q 005532 424 VVTIKNLEFGYEDRL-LFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL---------PNYF 493 (692)
Q Consensus 424 ~l~~~~l~~~y~~~~-~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~~---------~~~~ 493 (692)
||++.+++++|++.. +++||||+++.|+++||.|+|||||||+|++|++++.|++|.|.++|.+.. ++..
T Consensus 1 Ml~v~~l~K~y~~~v~AvrdVSF~ae~Gei~GlLG~NGAGKTT~LRmiatlL~P~~G~v~idg~d~~~~p~~vrr~IGVl 80 (245)
T COG4555 1 MLEVTDLTKSYGSKVQAVRDVSFEAEEGEITGLLGENGAGKTTLLRMIATLLIPDSGKVTIDGVDTVRDPSFVRRKIGVL 80 (245)
T ss_pred CeeeeehhhhccCHHhhhhheeEEeccceEEEEEcCCCCCchhHHHHHHHhccCCCceEEEeecccccChHHHhhhccee
Confidence 589999999999865 899999999999999999999999999999999999999999999987652 1222
Q ss_pred cccchhhcCCCccHHHHHHHHhcccc------HHHHHHHHhhcCCCcccccccCCCCCHHHHHHHHHHHHhccCCcEEEE
Q 005532 494 EQNQAEALDLDKTVLETVAEAAEDWR------IDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVL 567 (692)
Q Consensus 494 ~q~~~~~l~~~~tv~e~~~~~~~~~~------~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~LAral~~~p~lLlL 567 (692)
. -...+...+|+.||+......+. ..++.++.+.|++ .+..++++..||-|+||||+|||||+++|++|||
T Consensus 81 ~--~e~glY~RlT~rEnl~~Fa~L~~l~~~~~kari~~l~k~l~l-~~~~~rRv~~~S~G~kqkV~iARAlvh~P~i~vl 157 (245)
T COG4555 81 F--GERGLYARLTARENLKYFARLNGLSRKEIKARIAELSKRLQL-LEYLDRRVGEFSTGMKQKVAIARALVHDPSILVL 157 (245)
T ss_pred c--CCcChhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhCh-HHHHHHHHhhhchhhHHHHHHHHHHhcCCCeEEE
Confidence 2 12356678999999987654322 2357788888999 4678999999999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhccEEEEEECCEEEEecCChhHH
Q 005532 568 DEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYY 628 (692)
Q Consensus 568 DEPTn~LD~~~~~~l~~~l~~~---~~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~~~ 628 (692)
||||||||+.++..+.+++.+. +.+||+.||++.+++.+||+|++|+.|+++ +.|+.+..
T Consensus 158 DEP~sGLDi~~~r~~~dfi~q~k~egr~viFSSH~m~EvealCDrvivlh~Gevv-~~gs~~~l 220 (245)
T COG4555 158 DEPTSGLDIRTRRKFHDFIKQLKNEGRAVIFSSHIMQEVEALCDRVIVLHKGEVV-LEGSIEAL 220 (245)
T ss_pred cCCCCCccHHHHHHHHHHHHHhhcCCcEEEEecccHHHHHHhhheEEEEecCcEE-EcCCHHHH
Confidence 9999999999999999998865 459999999999999999999999999998 56776544
No 232
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.8e-40 Score=358.24 Aligned_cols=202 Identities=29% Similarity=0.451 Sum_probs=176.4
Q ss_pred eEEEEeEEEEcCCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccce--------eeeecc
Q 005532 424 VVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL--------PNYFEQ 495 (692)
Q Consensus 424 ~l~~~~l~~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~~--------~~~~~q 495 (692)
.|+++|++++|+++.+|+++||+|++|++++|+|||||||||||++|+|+++|++|+|.++|.++. .+|++|
T Consensus 3 ~l~i~~l~~~~~~~~vl~~vsl~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~p~~G~I~~~g~~i~~~~~~~~~i~~v~Q 82 (369)
T PRK11000 3 SVTLRNVTKAYGDVVISKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLEDITSGDLFIGEKRMNDVPPAERGVGMVFQ 82 (369)
T ss_pred EEEEEEEEEEeCCeEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHhHCCEEEEeC
Confidence 589999999999888999999999999999999999999999999999999999999999886542 457776
Q ss_pred cchhhcCCCccHHHHHHHHhcc--cc----HHHHHHHHhhcCCCcccccccCCCCCHHHHHHHHHHHHhccCCcEEEEeC
Q 005532 496 NQAEALDLDKTVLETVAEAAED--WR----IDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDE 569 (692)
Q Consensus 496 ~~~~~l~~~~tv~e~~~~~~~~--~~----~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~LAral~~~p~lLlLDE 569 (692)
+ ..+++.+|+.+|+...... .. ...+.++++.+++. ...++++.+|||||||||+|||||+.+|+||||||
T Consensus 83 ~--~~l~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~~~~~~~LSgGq~QRvaLAraL~~~P~lLLLDE 159 (369)
T PRK11000 83 S--YALYPHLSVAENMSFGLKLAGAKKEEINQRVNQVAEVLQLA-HLLDRKPKALSGGQRQRVAIGRTLVAEPSVFLLDE 159 (369)
T ss_pred C--cccCCCCCHHHHHHhHHhhcCCCHHHHHHHHHHHHHHcCCh-hhhcCChhhCCHHHHHHHHHHHHHhcCCCEEEEeC
Confidence 5 3567789999999764321 11 23578899999995 66899999999999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEECCEEEEecCChhHHH
Q 005532 570 PTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYYL 629 (692)
Q Consensus 570 PTn~LD~~~~~~l~~~l~~~----~~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~~~~ 629 (692)
||++||+.+++.+.+.|+++ +.|+|+||||++++..+||+|++|++|++..+ |+.+++.
T Consensus 160 Pts~LD~~~~~~l~~~L~~l~~~~g~tvI~vTHd~~~~~~~~d~i~vl~~G~i~~~-g~~~~i~ 222 (369)
T PRK11000 160 PLSNLDAALRVQMRIEISRLHKRLGRTMIYVTHDQVEAMTLADKIVVLDAGRVAQV-GKPLELY 222 (369)
T ss_pred CcccCCHHHHHHHHHHHHHHHHHhCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEE-cCHHHHH
Confidence 99999999999999888754 56999999999999999999999999999854 6665553
No 233
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.7e-40 Score=339.57 Aligned_cols=209 Identities=18% Similarity=0.270 Sum_probs=170.3
Q ss_pred CcEEEEeEEEEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCC---CCC--CccEEEECCCC----------
Q 005532 96 SGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQ---EEP--DSGNVIKAKSN---------- 160 (692)
Q Consensus 96 ~~l~i~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~---~~p--~~G~I~~~~~~---------- 160 (692)
++|+++|+++.|+++++|+|+||+|++|++++|+|+||||||||+++|+|+ ++| ++|+|.++|..
T Consensus 2 ~~l~~~~~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~~ 81 (250)
T PRK14245 2 VKIDARDVNFWYGDFHALKGISMEIEEKSVVAFIGPSGCGKSTFLRLFNRMNDLIPATRLEGEIRIDGRNIYDKGVQVDE 81 (250)
T ss_pred cEEEEEEEEEEECCEeEEeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhhhhcccCCCCCceEEEECCEecccccccHHH
Confidence 359999999999988899999999999999999999999999999999997 455 58999998742
Q ss_pred --ceEEEEcccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHH
Q 005532 161 --MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAK 238 (692)
Q Consensus 161 --~~i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (692)
..|+|++|++.++. .|+.+|+...+.. ... ......+..
T Consensus 82 ~~~~i~~v~q~~~~~~-~tv~~nl~~~~~~---------------~~~-----------------------~~~~~~~~~ 122 (250)
T PRK14245 82 LRKNVGMVFQRPNPFP-KSIFENVAYGLRV---------------NGV-----------------------KDNAFIRQR 122 (250)
T ss_pred HhhheEEEecCCccCc-ccHHHHHHHHHHH---------------cCC-----------------------CcHHHHHHH
Confidence 14999999987765 6999998532110 000 000012344
Q ss_pred HHHHhhhcCCCc---cccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc--CCCeEEEEe
Q 005532 239 VSKLMPELGFTA---DDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVIIS 313 (692)
Q Consensus 239 i~~ll~~lgl~~---~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~--~~~tvI~vs 313 (692)
+.++++.+|+.+ ...++++.+|||||||||+|||||+.+|+||||||||++||+.+++++.++|++ .++|||+||
T Consensus 123 ~~~~l~~~~l~~~~~~~~~~~~~~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivt 202 (250)
T PRK14245 123 VEETLKGAALWDEVKDKLKESAFALSGGQQQRLCIARAMAVSPSVLLMDEPASALDPISTAKVEELIHELKKDYTIVIVT 202 (250)
T ss_pred HHHHHHHcCCCcchhhhhhCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEe
Confidence 566777788742 245778899999999999999999999999999999999999999999888754 468999999
Q ss_pred cCHHHHHhhcCeEEEEecceEEEeccChHHH
Q 005532 314 HDRAFLDQLCTKIVETEMGVSRTYEGNYSQY 344 (692)
Q Consensus 314 Hd~~~l~~~~d~i~~l~~G~~~~~~G~y~~~ 344 (692)
||++++..+||+|+++++|++ .+.|...++
T Consensus 203 H~~~~~~~~~d~v~~l~~G~~-~~~~~~~~~ 232 (250)
T PRK14245 203 HNMQQAARVSDKTAFFYMGEM-VEYDDTKKI 232 (250)
T ss_pred CCHHHHHhhCCEEEEEECCEE-EEECCHHHH
Confidence 999999999999999999998 456765444
No 234
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=4.7e-40 Score=356.84 Aligned_cols=206 Identities=26% Similarity=0.432 Sum_probs=179.9
Q ss_pred CCceEEEEeEEEEcCCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccce--------eee
Q 005532 421 GRSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL--------PNY 492 (692)
Q Consensus 421 ~~~~l~~~~l~~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~~--------~~~ 492 (692)
..++|+++|+++.|++..+|+++||+|++||+++|+|||||||||||++|+|+++|++|+|.++|.++. .+|
T Consensus 11 ~~~~L~l~~l~~~~~~~~~l~~vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~~r~ig~ 90 (375)
T PRK09452 11 LSPLVELRGISKSFDGKEVISNLDLTINNGEFLTLLGPSGCGKTTVLRLIAGFETPDSGRIMLDGQDITHVPAENRHVNT 90 (375)
T ss_pred CCceEEEEEEEEEECCeEEEeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHHHCCEEE
Confidence 445799999999999888999999999999999999999999999999999999999999999987652 456
Q ss_pred ecccchhhcCCCccHHHHHHHHhcc--cc----HHHHHHHHhhcCCCcccccccCCCCCHHHHHHHHHHHHhccCCcEEE
Q 005532 493 FEQNQAEALDLDKTVLETVAEAAED--WR----IDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLV 566 (692)
Q Consensus 493 ~~q~~~~~l~~~~tv~e~~~~~~~~--~~----~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~LAral~~~p~lLl 566 (692)
++|+ ..+++.+||.+|+...... .. ...+.++++.+++. +..++++.+|||||||||+|||||+.+|+|||
T Consensus 91 vfQ~--~~lfp~ltv~eNi~~~l~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~p~~LSgGq~QRVaLARaL~~~P~llL 167 (375)
T PRK09452 91 VFQS--YALFPHMTVFENVAFGLRMQKTPAAEITPRVMEALRMVQLE-EFAQRKPHQLSGGQQQRVAIARAVVNKPKVLL 167 (375)
T ss_pred EecC--cccCCCCCHHHHHHHHHhhcCCCHHHHHHHHHHHHHHcCCc-hhhhCChhhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 7765 4678899999999865321 11 23577889999995 67899999999999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEECCEEEEecCChhHHHH
Q 005532 567 LDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYYLE 630 (692)
Q Consensus 567 LDEPTn~LD~~~~~~l~~~l~~~----~~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~~~~~ 630 (692)
|||||++||..+++.|.+.|+++ +.|+|+||||.+++..+||+|++|++|++... |..+++..
T Consensus 168 LDEP~s~LD~~~r~~l~~~L~~l~~~~g~tiI~vTHd~~ea~~laDri~vl~~G~i~~~-g~~~~i~~ 234 (375)
T PRK09452 168 LDESLSALDYKLRKQMQNELKALQRKLGITFVFVTHDQEEALTMSDRIVVMRDGRIEQD-GTPREIYE 234 (375)
T ss_pred EeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEE-cCHHHHHh
Confidence 99999999999999999988754 56999999999999999999999999999864 55555443
No 235
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=5.5e-40 Score=338.00 Aligned_cols=202 Identities=27% Similarity=0.420 Sum_probs=175.2
Q ss_pred eEEEEeEEEEcCCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccce-----------eee
Q 005532 424 VVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL-----------PNY 492 (692)
Q Consensus 424 ~l~~~~l~~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~~-----------~~~ 492 (692)
+|+++|+++.|+++++|+++||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|.++. .+|
T Consensus 2 ~i~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~i~~ 81 (242)
T TIGR03411 2 ILYLEGLSVSFDGFKALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTRPDEGSVLFGGTDLTGLPEHQIARAGIGR 81 (242)
T ss_pred eEEEEeeEEEcCCeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCeecCCCCHHHHHhcCeeE
Confidence 689999999998888999999999999999999999999999999999999999999999986542 335
Q ss_pred ecccchhhcCCCccHHHHHHHHhcc------------c--cHHHHHHHHhhcCCCcccccccCCCCCHHHHHHHHHHHHh
Q 005532 493 FEQNQAEALDLDKTVLETVAEAAED------------W--RIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFM 558 (692)
Q Consensus 493 ~~q~~~~~l~~~~tv~e~~~~~~~~------------~--~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~LAral 558 (692)
++|. ..+.+..|+.+|+...... . ....+..+++.+|+. ...++++.+|||||+|||+|||||
T Consensus 82 ~~q~--~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LS~Ge~qrv~laral 158 (242)
T TIGR03411 82 KFQK--PTVFENLTVFENLELALPRDKSVFASLFFRLSAEEKDRIEEVLETIGLA-DEADRLAGLLSHGQKQWLEIGMLL 158 (242)
T ss_pred eccc--cccCCCCCHHHHHHHhhhcccccccccccccHHHHHHHHHHHHHHcCCc-hhhcCChhhCCHHHHHHHHHHHHH
Confidence 5554 3466778999998764210 0 123577889999995 567899999999999999999999
Q ss_pred ccCCcEEEEeCCCCCCCHHHHHHHHHHHHhcC--ceEEEEecCHHHHHhhccEEEEEECCEEEEecCChhHHH
Q 005532 559 VKPSTLLVLDEPTNHLDIPSKEMLEEAISEYK--GTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYYL 629 (692)
Q Consensus 559 ~~~p~lLlLDEPTn~LD~~~~~~l~~~l~~~~--~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~~~~ 629 (692)
+.+|++|||||||++||+.++..+.+.|+++. .|||+||||++++..+||+|++|++|++. ..|+.+++.
T Consensus 159 ~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~~~-~~~~~~~~~ 230 (242)
T TIGR03411 159 MQDPKLLLLDEPVAGMTDEETEKTAELLKSLAGKHSVVVVEHDMEFVRSIADKVTVLHQGSVL-AEGSLDQVQ 230 (242)
T ss_pred hcCCCEEEecCCccCCCHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCeEE-eeCCHHHHh
Confidence 99999999999999999999999999998763 59999999999999999999999999998 457777664
No 236
>PRK10908 cell division protein FtsE; Provisional
Probab=100.00 E-value=3.4e-40 Score=335.19 Aligned_cols=197 Identities=26% Similarity=0.422 Sum_probs=169.4
Q ss_pred eEEEEeEEEEc-CCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccce-------------
Q 005532 424 VVTIKNLEFGY-EDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL------------- 489 (692)
Q Consensus 424 ~l~~~~l~~~y-~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~~------------- 489 (692)
+|+++|+++.| +++.+|+++||+|++|+++||+||||||||||+++|+|+++|++|+|.++|.++.
T Consensus 1 ~l~~~~l~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~ 80 (222)
T PRK10908 1 MIRFEHVSKAYLGGRQALQGVTFHMRPGEMAFLTGHSGAGKSTLLKLICGIERPSAGKIWFSGHDITRLKNREVPFLRRQ 80 (222)
T ss_pred CEEEEeeEEEecCCCeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccCChhHHHHHHhh
Confidence 47899999999 6678999999999999999999999999999999999999999999999886541
Q ss_pred eeeecccchhhcCCCccHHHHHHHHhc--ccc----HHHHHHHHhhcCCCcccccccCCCCCHHHHHHHHHHHHhccCCc
Q 005532 490 PNYFEQNQAEALDLDKTVLETVAEAAE--DWR----IDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPST 563 (692)
Q Consensus 490 ~~~~~q~~~~~l~~~~tv~e~~~~~~~--~~~----~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~LAral~~~p~ 563 (692)
.+|++|.. .+.+..|+.+|+..... ... ...+.++++.+++. ...++++.+|||||||||+|||||+.+|+
T Consensus 81 i~~~~q~~--~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LS~G~~qrv~laral~~~p~ 157 (222)
T PRK10908 81 IGMIFQDH--HLLMDRTVYDNVAIPLIIAGASGDDIRRRVSAALDKVGLL-DKAKNFPIQLSGGEQQRVGIARAVVNKPA 157 (222)
T ss_pred eEEEecCc--cccccccHHHHHHhHHHhcCCCHHHHHHHHHHHHHHcCCh-hhhhCCchhCCHHHHHHHHHHHHHHcCCC
Confidence 24556543 45567899999875421 111 22467889999995 56788999999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhccEEEEEECCEEEEecC
Q 005532 564 LLVLDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAG 623 (692)
Q Consensus 564 lLlLDEPTn~LD~~~~~~l~~~l~~~---~~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g 623 (692)
+|||||||++||+.+++.+.+.|.++ +.|||+||||++++..+||+|++|++|+++.-.|
T Consensus 158 llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~ 220 (222)
T PRK10908 158 VLLADEPTGNLDDALSEGILRLFEEFNRVGVTVLMATHDIGLISRRSYRMLTLSDGHLHGGVG 220 (222)
T ss_pred EEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEccCCC
Confidence 99999999999999999999998865 4699999999999999999999999999875444
No 237
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.9e-40 Score=354.44 Aligned_cols=202 Identities=28% Similarity=0.403 Sum_probs=174.2
Q ss_pred eEEEEeEEEEcC----CeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccce----------
Q 005532 424 VVTIKNLEFGYE----DRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL---------- 489 (692)
Q Consensus 424 ~l~~~~l~~~y~----~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~~---------- 489 (692)
||+++||+++|+ ++.+|+++||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++.
T Consensus 1 mi~i~~l~~~y~~~~~~~~il~~vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~ 80 (343)
T PRK11153 1 MIELKNISKVFPQGGRTIHALNNVSLHIPAGEIFGVIGASGAGKSTLIRCINLLERPTSGRVLVDGQDLTALSEKELRKA 80 (343)
T ss_pred CEEEEeEEEEeCCCCCceEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHH
Confidence 489999999997 367999999999999999999999999999999999999999999999986542
Q ss_pred ---eeeecccchhhcCCCccHHHHHHHHhcc--cc----HHHHHHHHhhcCCCcccccccCCCCCHHHHHHHHHHHHhcc
Q 005532 490 ---PNYFEQNQAEALDLDKTVLETVAEAAED--WR----IDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVK 560 (692)
Q Consensus 490 ---~~~~~q~~~~~l~~~~tv~e~~~~~~~~--~~----~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~LAral~~ 560 (692)
.+|++|+. .+.+..|+.+|+...... .. ...+..+++.+|+. +..++++.+|||||||||+|||||+.
T Consensus 81 ~~~ig~v~q~~--~l~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~-~~~~~~~~~LSgGq~qRv~lAraL~~ 157 (343)
T PRK11153 81 RRQIGMIFQHF--NLLSSRTVFDNVALPLELAGTPKAEIKARVTELLELVGLS-DKADRYPAQLSGGQKQRVAIARALAS 157 (343)
T ss_pred hcCEEEEeCCC--ccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCc-hhhhCChhhCCHHHHHHHHHHHHHHc
Confidence 34666643 466778999999764321 11 23567899999995 56789999999999999999999999
Q ss_pred CCcEEEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEECCEEEEecCChhHHH
Q 005532 561 PSTLLVLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYYL 629 (692)
Q Consensus 561 ~p~lLlLDEPTn~LD~~~~~~l~~~l~~~----~~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~~~~ 629 (692)
+|+||||||||++||+.++..+.+.|+++ +.|||+||||++++.++||+|++|++|++.. .|..++..
T Consensus 158 ~p~iLlLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiilvtH~~~~i~~~~d~v~~l~~G~i~~-~g~~~~~~ 229 (343)
T PRK11153 158 NPKVLLCDEATSALDPATTRSILELLKDINRELGLTIVLITHEMDVVKRICDRVAVIDAGRLVE-QGTVSEVF 229 (343)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEE-EcCHHHHH
Confidence 99999999999999999999999999865 4599999999999999999999999999984 46655543
No 238
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=3.9e-40 Score=359.49 Aligned_cols=204 Identities=25% Similarity=0.427 Sum_probs=178.2
Q ss_pred ceEEEEeEEEEcCCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccce----------eee
Q 005532 423 SVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL----------PNY 492 (692)
Q Consensus 423 ~~l~~~~l~~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~~----------~~~ 492 (692)
++|+++||+++|+++.+|+++||+|++||+++|+||||||||||||+|+|+++|++|+|.++|.++. .+|
T Consensus 2 ~~L~~~nls~~y~~~~vL~~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~p~sG~I~l~G~~i~~~~~~~~~~~ig~ 81 (402)
T PRK09536 2 PMIDVSDLSVEFGDTTVLDGVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLTPTAGTVLVAGDDVEALSARAASRRVAS 81 (402)
T ss_pred ceEEEeeEEEEECCEEEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhcCCCCCCcEEEECCEEcCcCCHHHHhcceEE
Confidence 4699999999999999999999999999999999999999999999999999999999999986542 356
Q ss_pred ecccchhhcCCCccHHHHHHHHhc----c------ccHHHHHHHHhhcCCCcccccccCCCCCHHHHHHHHHHHHhccCC
Q 005532 493 FEQNQAEALDLDKTVLETVAEAAE----D------WRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPS 562 (692)
Q Consensus 493 ~~q~~~~~l~~~~tv~e~~~~~~~----~------~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~LAral~~~p 562 (692)
+.|. ..+.+.+|+.+++..... . .....+.++++.+++. +..++++.+|||||||||+|||||+++|
T Consensus 82 v~q~--~~l~~~~tv~e~v~~~~~~~~~~~~~~~~~~~~~v~~~le~vgl~-~~~~~~~~~LSgGerQRv~IArAL~~~P 158 (402)
T PRK09536 82 VPQD--TSLSFEFDVRQVVEMGRTPHRSRFDTWTETDRAAVERAMERTGVA-QFADRPVTSLSGGERQRVLLARALAQAT 158 (402)
T ss_pred EccC--CCCCCCCCHHHHHHhccchhcccccCCCHHHHHHHHHHHHHcCCc-hhhcCChhhCCHHHHHHHHHHHHHHcCC
Confidence 6654 356678999999875421 1 1123578899999995 6789999999999999999999999999
Q ss_pred cEEEEeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhccEEEEEECCEEEEecCChhHHHH
Q 005532 563 TLLVLDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYYLE 630 (692)
Q Consensus 563 ~lLlLDEPTn~LD~~~~~~l~~~l~~~---~~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~~~~~ 630 (692)
+||||||||+|||+.++..+.++|+++ +.|||++|||++++.++|||+++|++|++.. .|+.+++..
T Consensus 159 ~iLLLDEPtsgLD~~~~~~l~~lL~~l~~~g~TIIivsHdl~~~~~~adrii~l~~G~iv~-~G~~~ev~~ 228 (402)
T PRK09536 159 PVLLLDEPTASLDINHQVRTLELVRRLVDDGKTAVAAIHDLDLAARYCDELVLLADGRVRA-AGPPADVLT 228 (402)
T ss_pred CEEEEECCcccCCHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEEE-ecCHHHHhC
Confidence 999999999999999999999998865 4599999999999999999999999999984 588777654
No 239
>TIGR03608 L_ocin_972_ABC putative bacteriocin export ABC transporter, lactococcin 972 group. A gene pair with a fairly wide distribution consists of a polypeptide related to the lactococcin 972 (see TIGR01653) and multiple-membrane-spanning putative immunity protein (see TIGR01654). This model represents a small clade within the ABC transporters that regularly are found adjacent to these bacteriocin system gene pairs and are likely serve as export proteins.
Probab=100.00 E-value=2e-40 Score=332.85 Aligned_cols=189 Identities=28% Similarity=0.441 Sum_probs=160.4
Q ss_pred EEeEEEEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC--------------ceEEE
Q 005532 100 LENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN--------------MKIAF 165 (692)
Q Consensus 100 i~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~--------------~~i~~ 165 (692)
++|+++.|+++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.+ ..++|
T Consensus 1 i~~l~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~i~~ 80 (206)
T TIGR03608 1 LKNISKKFGDKIILDDLNLTIEKGKMYAIIGESGSGKSTLLNIIGLLEKFDSGQVYLNGKETPPLNSKKASKFRREKLGY 80 (206)
T ss_pred CcceEEEECCEEEEeceEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccchhhHHHHHHhCeeE
Confidence 4789999998889999999999999999999999999999999999999999999998743 25999
Q ss_pred EcccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHHhhh
Q 005532 166 LSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPE 245 (692)
Q Consensus 166 v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~ 245 (692)
++|++.+++..|++||+...... . .........++.++++.
T Consensus 81 ~~q~~~~~~~~t~~e~~~~~~~~---------------~------------------------~~~~~~~~~~~~~~l~~ 121 (206)
T TIGR03608 81 LFQNFALIENETVEENLDLGLKY---------------K------------------------KLSKKEKREKKKEALEK 121 (206)
T ss_pred EecchhhccCCcHHHHHHHHHHh---------------c------------------------CCCHHHHHHHHHHHHHH
Confidence 99999887788999998531100 0 00011223456678888
Q ss_pred cCCCccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc---CCCeEEEEecCHHHHHhh
Q 005532 246 LGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK---QDVPMVIISHDRAFLDQL 322 (692)
Q Consensus 246 lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~---~~~tvI~vsHd~~~l~~~ 322 (692)
+|+. ...++++.+|||||+||++|||||+.+|++|||||||++||+.+++++.++|++ .+.|||+|||+++++ .+
T Consensus 122 ~~l~-~~~~~~~~~lS~G~~qr~~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~-~~ 199 (206)
T TIGR03608 122 VGLN-LKLKQKIYELSGGEQQRVALARAILKDPPLILADEPTGSLDPKNRDEVLDLLLELNDEGKTIIIVTHDPEVA-KQ 199 (206)
T ss_pred cCch-hhhcCChhhCCHHHHHHHHHHHHHHcCCCEEEEeCCcCCCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHH-hh
Confidence 8985 567888999999999999999999999999999999999999999999988754 488999999999977 57
Q ss_pred cCeEEEE
Q 005532 323 CTKIVET 329 (692)
Q Consensus 323 ~d~i~~l 329 (692)
||+|+++
T Consensus 200 ~d~i~~l 206 (206)
T TIGR03608 200 ADRVIEL 206 (206)
T ss_pred cCEEEeC
Confidence 9999864
No 240
>PRK14240 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.4e-40 Score=339.21 Aligned_cols=207 Identities=20% Similarity=0.304 Sum_probs=167.1
Q ss_pred cEEEEeEEEEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCC-----CccEEEECCCC-----------
Q 005532 97 GVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEP-----DSGNVIKAKSN----------- 160 (692)
Q Consensus 97 ~l~i~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p-----~~G~I~~~~~~----------- 160 (692)
.|+++|+++.|+++++|+|+||+|++||+++|+|+||||||||+++|+|+++| ++|+|.++|..
T Consensus 3 ~l~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~ 82 (250)
T PRK14240 3 KISVKDLDLFYGDFQALKKINLDIEENQVTALIGPSGCGKSTFLRTLNRMNDLIPSVKIEGEVLLDGQDIYKSDIDVNQL 82 (250)
T ss_pred eEEEEEEEEEECCceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccchHHH
Confidence 58999999999988899999999999999999999999999999999999763 69999998632
Q ss_pred -ceEEEEcccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHH
Q 005532 161 -MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKV 239 (692)
Q Consensus 161 -~~i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 239 (692)
..|+|++|++.++. .|+.+|+...... ... .......+++
T Consensus 83 ~~~i~~~~q~~~~~~-~t~~~ni~~~~~~---------------~~~-----------------------~~~~~~~~~~ 123 (250)
T PRK14240 83 RKRVGMVFQQPNPFP-MSIYDNVAYGPRT---------------HGI-----------------------KDKKKLDEIV 123 (250)
T ss_pred hccEEEEecCCccCc-ccHHHHHHHHHHh---------------cCC-----------------------CCHHHHHHHH
Confidence 25999999987765 8999998532100 000 0000122334
Q ss_pred HHHhhhcCCCc---cccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc--CCCeEEEEec
Q 005532 240 SKLMPELGFTA---DDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVIISH 314 (692)
Q Consensus 240 ~~ll~~lgl~~---~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~--~~~tvI~vsH 314 (692)
.++++.+++.. ...++++.+|||||+|||+|||||+.+|++|||||||++||+.++.++.++|++ .+.|||+|||
T Consensus 124 ~~~l~~~~l~~~l~~~~~~~~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH 203 (250)
T PRK14240 124 EKSLKGAALWDEVKDRLKKSALGLSGGQQQRLCIARALAVEPEVLLMDEPTSALDPISTLKIEELIQELKKDYTIVIVTH 203 (250)
T ss_pred HHHHHHcCCchhhHHHHhcCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEEe
Confidence 45555665531 245778999999999999999999999999999999999999999999888753 3789999999
Q ss_pred CHHHHHhhcCeEEEEecceEEEeccChHH
Q 005532 315 DRAFLDQLCTKIVETEMGVSRTYEGNYSQ 343 (692)
Q Consensus 315 d~~~l~~~~d~i~~l~~G~~~~~~G~y~~ 343 (692)
|++++..+||+|+++++|++. ..|...+
T Consensus 204 ~~~~~~~~~d~v~~l~~G~i~-~~~~~~~ 231 (250)
T PRK14240 204 NMQQASRISDKTAFFLNGEIV-EFGDTVD 231 (250)
T ss_pred CHHHHHhhCCEEEEEECCEEE-EeCCHHH
Confidence 999999999999999999985 4455433
No 241
>PRK14251 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.7e-40 Score=339.77 Aligned_cols=206 Identities=20% Similarity=0.292 Sum_probs=168.0
Q ss_pred cEEEEeEEEEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCC-----CCccEEEECCCC-----------
Q 005532 97 GVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEE-----PDSGNVIKAKSN----------- 160 (692)
Q Consensus 97 ~l~i~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~-----p~~G~I~~~~~~----------- 160 (692)
+|+++|++|+|+++++|+++||+|++||+++|+|+||||||||+++|+|+++ |++|+|.++|..
T Consensus 4 ~l~~~~l~~~~~~~~~l~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~v~i~g~~~~~~~~~~~~~ 83 (251)
T PRK14251 4 IISAKDVHLSYGNYEALHGISLDFEEKELTALIGPSGCGKSTFLRCLNRMNDDIENIKITGEIKFEGQNIYGSKMDLVEL 83 (251)
T ss_pred eEEEEeeEEEECCeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhhccccccCCCcceEEEECCEEcccccchHHHh
Confidence 5899999999998889999999999999999999999999999999999997 479999988742
Q ss_pred -ceEEEEcccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHH
Q 005532 161 -MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKV 239 (692)
Q Consensus 161 -~~i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 239 (692)
..|+|++|++.++. .||++|+...+.. ... ........++
T Consensus 84 ~~~i~~~~q~~~~~~-~tv~enl~~~~~~---------------~~~-----------------------~~~~~~~~~~ 124 (251)
T PRK14251 84 RKEVGMVFQQPTPFP-FSVYDNVAYGLKI---------------AGV-----------------------KDKELIDQRV 124 (251)
T ss_pred hccEEEEecCCccCC-CcHHHHHHHHHHH---------------cCC-----------------------CCHHHHHHHH
Confidence 24999999988764 7999998532110 000 0000112334
Q ss_pred HHHhhhcCCC---ccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc--CCCeEEEEec
Q 005532 240 SKLMPELGFT---ADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVIISH 314 (692)
Q Consensus 240 ~~ll~~lgl~---~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~--~~~tvI~vsH 314 (692)
.++++.+|+. ....++++.+|||||+||++|||||+.+|++|||||||++||+.+++++.++|++ .+.|||+|||
T Consensus 125 ~~~l~~~~l~~~~~~~~~~~~~~LS~Gq~qr~~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiiiisH 204 (251)
T PRK14251 125 EESLKQAAIWKETKDNLDRNAQAFSGGQQQRICIARALAVRPKVVLLDEPTSALDPISSSEIEETLMELKHQYTFIMVTH 204 (251)
T ss_pred HHHHHHcCCCcchHHHhccChhhCCHHHHHHHHHHHHHhcCCCEEEecCCCccCCHHHHHHHHHHHHHHHcCCeEEEEEC
Confidence 5566666763 1345778999999999999999999999999999999999999999999888754 3689999999
Q ss_pred CHHHHHhhcCeEEEEecceEEEeccChH
Q 005532 315 DRAFLDQLCTKIVETEMGVSRTYEGNYS 342 (692)
Q Consensus 315 d~~~l~~~~d~i~~l~~G~~~~~~G~y~ 342 (692)
+++++..+||+|+++++|++. ..|...
T Consensus 205 ~~~~~~~~~d~i~~l~~G~i~-~~~~~~ 231 (251)
T PRK14251 205 NLQQAGRISDQTAFLMNGDLI-EAGPTE 231 (251)
T ss_pred CHHHHHhhcCEEEEEECCEEE-EeCCHH
Confidence 999999999999999999985 345543
No 242
>PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional
Probab=100.00 E-value=7.2e-40 Score=350.93 Aligned_cols=211 Identities=20% Similarity=0.359 Sum_probs=173.2
Q ss_pred CCcEEEEeEEEEeC----CeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCC---ccEEEECCCC-------
Q 005532 95 SSGVKLENISKSYK----GVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPD---SGNVIKAKSN------- 160 (692)
Q Consensus 95 ~~~l~i~~ls~~y~----~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~---~G~I~~~~~~------- 160 (692)
++.|+++|+++.|+ ..++|+||||+|++||+++|+|+||||||||+++|+|+++|+ +|+|.++|.+
T Consensus 10 ~~~L~i~~l~~~~~~~~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTL~~~l~Gl~~p~~~~sG~I~~~G~~i~~~~~~ 89 (330)
T PRK09473 10 DALLDVKDLRVTFSTPDGDVTAVNDLNFSLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGREILNLPEK 89 (330)
T ss_pred CceEEEeCeEEEEecCCCCEEEEeeeEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCCCeEEEECCEECCcCCHH
Confidence 45799999999995 246999999999999999999999999999999999999996 9999998743
Q ss_pred -------ceEEEEcccC--ccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcC
Q 005532 161 -------MKIAFLSQEF--EVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVN 231 (692)
Q Consensus 161 -------~~i~~v~Q~~--~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (692)
..|+|++|++ .+.+..|+.+++...+.. . ....
T Consensus 90 ~~~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~~~~---------------~-----------------------~~~~ 131 (330)
T PRK09473 90 ELNKLRAEQISMIFQDPMTSLNPYMRVGEQLMEVLML---------------H-----------------------KGMS 131 (330)
T ss_pred HHHHHhcCCEEEEEcCchhhcCCCCCHHHHHHHHHHH---------------h-----------------------cCCC
Confidence 2599999998 466778998887522100 0 0011
Q ss_pred cccHHHHHHHHhhhcCCCc--cccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHc----cC
Q 005532 232 LDTLDAKVSKLMPELGFTA--DDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG----KQ 305 (692)
Q Consensus 232 ~~~~~~~i~~ll~~lgl~~--~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~----~~ 305 (692)
..+...++.++|+.+|+++ ...++++.+|||||+|||+|||||+.+|+|||+||||++||+.++..+.++|+ +.
T Consensus 132 ~~~~~~~~~~~L~~vgL~~~~~~~~~~p~~LSgG~~QRv~IArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~ 211 (330)
T PRK09473 132 KAEAFEESVRMLDAVKMPEARKRMKMYPHEFSGGMRQRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKREF 211 (330)
T ss_pred HHHHHHHHHHHHHHcCCCChHHHhcCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHc
Confidence 1122345667788888863 23467899999999999999999999999999999999999999999888764 34
Q ss_pred CCeEEEEecCHHHHHhhcCeEEEEecceEEEeccChHHH
Q 005532 306 DVPMVIISHDRAFLDQLCTKIVETEMGVSRTYEGNYSQY 344 (692)
Q Consensus 306 ~~tvI~vsHd~~~l~~~~d~i~~l~~G~~~~~~G~y~~~ 344 (692)
+.|+|+||||++.+..+||+|++|.+|++. ..|...+.
T Consensus 212 g~til~iTHdl~~~~~~~Dri~vm~~G~iv-e~g~~~~i 249 (330)
T PRK09473 212 NTAIIMITHDLGVVAGICDKVLVMYAGRTM-EYGNARDV 249 (330)
T ss_pred CCEEEEEECCHHHHHHhCCEEEEEECCEEE-EECCHHHH
Confidence 899999999999999999999999999984 55765443
No 243
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.9e-40 Score=346.74 Aligned_cols=205 Identities=25% Similarity=0.342 Sum_probs=174.7
Q ss_pred eEEEEeEEEEcCC-----eecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccce---------
Q 005532 424 VVTIKNLEFGYED-----RLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL--------- 489 (692)
Q Consensus 424 ~l~~~~l~~~y~~-----~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~~--------- 489 (692)
+|+++||++.|+. +.+|+++||+|.+||++||+|+||||||||+++|+|+++|++|+|.++|.++.
T Consensus 1 mi~~~~v~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~ 80 (288)
T PRK13643 1 MIKFEKVNYTYQPNSPFASRALFDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQPTEGKVTVGDIVVSSTSKQKEIK 80 (288)
T ss_pred CEEEEEEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCCCCCcEEEECCEECccccccccHH
Confidence 5899999999973 25999999999999999999999999999999999999999999999987642
Q ss_pred -----eeeecccchhhcCCCccHHHHHHHHhccc------cHHHHHHHHhhcCCCcccccccCCCCCHHHHHHHHHHHHh
Q 005532 490 -----PNYFEQNQAEALDLDKTVLETVAEAAEDW------RIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFM 558 (692)
Q Consensus 490 -----~~~~~q~~~~~l~~~~tv~e~~~~~~~~~------~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~LAral 558 (692)
.+|+.|+....+. ..|+.+|+......+ ....+.++++.+++.....++++..|||||||||+|||+|
T Consensus 81 ~~~~~ig~v~q~~~~~l~-~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~LSgGqkqrvaiA~aL 159 (288)
T PRK13643 81 PVRKKVGVVFQFPESQLF-EETVLKDVAFGPQNFGIPKEKAEKIAAEKLEMVGLADEFWEKSPFELSGGQMRRVAIAGIL 159 (288)
T ss_pred HHHhhEEEEecCcchhcc-cchHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCCChhhccCCcccCCHHHHHHHHHHHHH
Confidence 3577776433343 469999997653211 1234678899999954567899999999999999999999
Q ss_pred ccCCcEEEEeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhccEEEEEECCEEEEecCChhHHHH
Q 005532 559 VKPSTLLVLDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYYLE 630 (692)
Q Consensus 559 ~~~p~lLlLDEPTn~LD~~~~~~l~~~l~~~---~~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~~~~~ 630 (692)
+.+|+||||||||++||+.++..|.+.|.++ +.|||+||||++++..+||||++|++|++. +.|..+++..
T Consensus 160 ~~~p~illLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~vtHd~~~~~~~~dri~~l~~G~i~-~~g~~~~~~~ 233 (288)
T PRK13643 160 AMEPEVLVLDEPTAGLDPKARIEMMQLFESIHQSGQTVVLVTHLMDDVADYADYVYLLEKGHII-SCGTPSDVFQ 233 (288)
T ss_pred HhCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEE-EECCHHHHHc
Confidence 9999999999999999999999999998764 469999999999999999999999999998 4587777654
No 244
>PRK15093 antimicrobial peptide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.6e-40 Score=351.83 Aligned_cols=214 Identities=21% Similarity=0.300 Sum_probs=172.2
Q ss_pred CcEEEEeEEEEeC----CeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCC----CCccEEEECCCC-------
Q 005532 96 SGVKLENISKSYK----GVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEE----PDSGNVIKAKSN------- 160 (692)
Q Consensus 96 ~~l~i~~ls~~y~----~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~----p~~G~I~~~~~~------- 160 (692)
++|+++|++++|+ ...+|+||||+|.+||+++|||+||||||||+++|+|+++ |++|+|.++|.+
T Consensus 2 ~~L~v~~l~~~y~~~~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTLl~~i~Gl~~~~~~~~~G~i~~~g~~i~~~~~~ 81 (330)
T PRK15093 2 PLLDIRNLTIEFKTSDGWVKAVDRVSMTLTEGEIRGLVGESGSGKSLIAKAICGVTKDNWRVTADRMRFDDIDLLRLSPR 81 (330)
T ss_pred CeEEEeeeEEEEeCCCCCEEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHHccCCCCCCCcceEEEECCEECCcCCHH
Confidence 3699999999994 3579999999999999999999999999999999999997 589999998742
Q ss_pred -------ceEEEEcccCc--cCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcC
Q 005532 161 -------MKIAFLSQEFE--VSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVN 231 (692)
Q Consensus 161 -------~~i~~v~Q~~~--~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (692)
..|+|++|++. +.+..||.+++...+... . ... . + ...
T Consensus 82 ~~~~~~~~~i~~v~Q~~~~~l~p~~tv~~~l~~~~~~~-~-----------~~~---------~---------~---~~~ 128 (330)
T PRK15093 82 ERRKLVGHNVSMIFQEPQSCLDPSERVGRQLMQNIPGW-T-----------YKG---------R---------W---WQR 128 (330)
T ss_pred HHHHHhCCCEEEEecCcchhcCccccHHHHHHHHHHhh-h-----------ccc---------c---------c---ccc
Confidence 25999999986 445678988874211000 0 000 0 0 000
Q ss_pred cccHHHHHHHHhhhcCCCc--cccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc----C
Q 005532 232 LDTLDAKVSKLMPELGFTA--DDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----Q 305 (692)
Q Consensus 232 ~~~~~~~i~~ll~~lgl~~--~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~----~ 305 (692)
......++.++|+.+|+.+ ...++++.+|||||+|||+|||||+.+|+||||||||++||+.++.++.++|++ .
T Consensus 129 ~~~~~~~~~~~L~~~gL~~~~~~~~~~p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~ 208 (330)
T PRK15093 129 FGWRKRRAIELLHRVGIKDHKDAMRSFPYELTEGECQKVMIAIALANQPRLLIADEPTNAMEPTTQAQIFRLLTRLNQNN 208 (330)
T ss_pred HHHHHHHHHHHHHHCCCCChHHHHhCCchhCCHHHHHHHHHHHHHHCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhc
Confidence 0122356778899999963 246788999999999999999999999999999999999999999999887753 5
Q ss_pred CCeEEEEecCHHHHHhhcCeEEEEecceEEEeccChHH
Q 005532 306 DVPMVIISHDRAFLDQLCTKIVETEMGVSRTYEGNYSQ 343 (692)
Q Consensus 306 ~~tvI~vsHd~~~l~~~~d~i~~l~~G~~~~~~G~y~~ 343 (692)
|.|||+||||++++..+||+|++|.+|++ ...|...+
T Consensus 209 g~tii~itHdl~~v~~~~dri~vm~~G~i-ve~g~~~~ 245 (330)
T PRK15093 209 NTTILLISHDLQMLSQWADKINVLYCGQT-VETAPSKE 245 (330)
T ss_pred CCEEEEEECCHHHHHHhCCEEEEEECCEE-EEECCHHH
Confidence 89999999999999999999999999998 45666443
No 245
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=2.2e-40 Score=368.28 Aligned_cols=243 Identities=23% Similarity=0.389 Sum_probs=182.6
Q ss_pred HHHHhHHHHHHhhhccCccccccccccccCCCCCCCCCCCcEEEEeEEEEeCCee---ceeeeeEEEECCcEEEEEcCCC
Q 005532 57 KSIAKAQSDVESLFSSSADEFENKKYSNKQSNTGASSISSGVKLENISKSYKGVT---VLKDVTWEVKKGEKVGLVGVNG 133 (692)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~ls~~y~~~~---vL~~vsl~i~~Ge~~~lvG~NG 133 (692)
..+.++-.+.+++|+..++.+..... . ...+. ...+.|+++||+|+|+.+| ||+|+||+|+|||+||||||||
T Consensus 429 s~lmkgvGAs~rvFel~dr~P~i~~~-G--~~~p~-~~~G~IeF~~VsFaYP~Rp~~~Vlk~lsfti~pGe~vALVGPSG 504 (716)
T KOG0058|consen 429 SELMKGVGASERVFELMDRKPRIPLT-G--TLAPD-HLQGVIEFEDVSFAYPTRPDVPVLKNLSFTIRPGEVVALVGPSG 504 (716)
T ss_pred HHHHHhcchHHHHHHHhccCCCCCCC-C--ccccc-cccceEEEEEeeeecCCCCCchhhcCceeeeCCCCEEEEECCCC
Confidence 34555555667777766554322222 1 11111 3456799999999998764 9999999999999999999999
Q ss_pred ccHHHHHHHHHCCCCCCccEEEECCCCc----------eEEEEcccCccCCCCCHHHHHHhhhHH----HHHHHHHHHHH
Q 005532 134 AGKTTQLRIIAGQEEPDSGNVIKAKSNM----------KIAFLSQEFEVSMSRTVREEFMSAFKE----EMEIAGKLERV 199 (692)
Q Consensus 134 sGKSTLl~~L~G~~~p~~G~I~~~~~~~----------~i~~v~Q~~~~~~~~Tv~e~i~~~~~~----~~~~~~~~~~~ 199 (692)
+||||+.++|..+|+|++|+|.++|.+. .||+|.|+|-+ ++.||+|||..+... ++..+++..+.
T Consensus 505 sGKSTiasLL~rfY~PtsG~IllDG~~i~~~~~~~lr~~Ig~V~QEPvL-Fs~sI~eNI~YG~~~~t~e~i~~AAk~ANa 583 (716)
T KOG0058|consen 505 SGKSTIASLLLRFYDPTSGRILLDGVPISDINHKYLRRKIGLVGQEPVL-FSGSIRENIAYGLDNATDEEIEAAAKMANA 583 (716)
T ss_pred CCHHHHHHHHHHhcCCCCCeEEECCeehhhcCHHHHHHHeeeeecccee-ecccHHHHHhcCCCCCCHHHHHHHHHHhCh
Confidence 9999999999999999999999998653 59999999987 789999999765431 11111111111
Q ss_pred HHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHHhhhcCCCccccccccccCChHHHHHHHHHHHHccCCC
Q 005532 200 QKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPD 279 (692)
Q Consensus 200 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~ 279 (692)
.+++..+.+ |..+.. ..+..+||||||||+||||||+++|.
T Consensus 584 ----------h~FI~~~p~----------------------------gY~T~V-GEkG~qLSGGQKQRIAIARALlr~P~ 624 (716)
T KOG0058|consen 584 ----------HEFITNFPD----------------------------GYNTVV-GEKGSQLSGGQKQRIAIARALLRNPR 624 (716)
T ss_pred ----------HHHHHhCcc----------------------------cccccc-CCccccccchHHHHHHHHHHHhcCCC
Confidence 111111110 222222 33478999999999999999999999
Q ss_pred eEEEcCCCCCCCHHHHHHHHHHHcc--CCCeEEEEecCHHHHHhhcCeEEEEecceEEEeccChHHHH
Q 005532 280 LLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVIISHDRAFLDQLCTKIVETEMGVSRTYEGNYSQYV 345 (692)
Q Consensus 280 lLLLDEPts~LD~~~~~~L~~~L~~--~~~tvI~vsHd~~~l~~~~d~i~~l~~G~~~~~~G~y~~~~ 345 (692)
||||||.||+||.++...+.+.|.+ .+.|||+|.|+++.+.+ +|+|+++++|++. -.|++++.+
T Consensus 625 VLILDEATSALDaeSE~lVq~aL~~~~~~rTVlvIAHRLSTV~~-Ad~Ivvi~~G~V~-E~G~h~eLl 690 (716)
T KOG0058|consen 625 VLILDEATSALDAESEYLVQEALDRLMQGRTVLVIAHRLSTVRH-ADQIVVIDKGRVV-EMGTHDELL 690 (716)
T ss_pred EEEEechhhhcchhhHHHHHHHHHHhhcCCeEEEEehhhhHhhh-ccEEEEEcCCeEE-ecccHHHHh
Confidence 9999999999999999998888753 47999999999999975 9999999999984 457665443
No 246
>PRK14239 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.1e-40 Score=338.78 Aligned_cols=208 Identities=22% Similarity=0.280 Sum_probs=168.3
Q ss_pred CcEEEEeEEEEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCC--CC---CccEEEECCCC----------
Q 005532 96 SGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQE--EP---DSGNVIKAKSN---------- 160 (692)
Q Consensus 96 ~~l~i~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~--~p---~~G~I~~~~~~---------- 160 (692)
++|+++|++++|+++++|+|+||+|++|++++|+||||||||||+++|+|+. +| ++|+|.++|..
T Consensus 4 ~~l~~~~l~~~~~~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~i~~~g~~~~~~~~~~~~ 83 (252)
T PRK14239 4 PILQVSDLSVYYNKKKALNSVSLDFYPNEITALIGPSGSGKSTLLRSINRMNDLNPEVTITGSIVYNGHNIYSPRTDTVD 83 (252)
T ss_pred ceEEEEeeEEEECCeeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhcccccCCCCCccceEEECCEECcCcccchHh
Confidence 3699999999999888999999999999999999999999999999999985 36 59999998732
Q ss_pred --ceEEEEcccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHH
Q 005532 161 --MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAK 238 (692)
Q Consensus 161 --~~i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (692)
..|+|++|++.++. .||.+|+...... ... .........
T Consensus 84 ~~~~i~~v~q~~~~~~-~tv~enl~~~~~~---------------~~~-----------------------~~~~~~~~~ 124 (252)
T PRK14239 84 LRKEIGMVFQQPNPFP-MSIYENVVYGLRL---------------KGI-----------------------KDKQVLDEA 124 (252)
T ss_pred hhhcEEEEecCCccCc-CcHHHHHHHHHHH---------------cCC-----------------------CcHHHHHHH
Confidence 25999999988765 8999998532100 000 000012234
Q ss_pred HHHHhhhcCCCc---cccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc--CCCeEEEEe
Q 005532 239 VSKLMPELGFTA---DDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVIIS 313 (692)
Q Consensus 239 i~~ll~~lgl~~---~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~--~~~tvI~vs 313 (692)
+.++++.+|+.. ...++++.+|||||||||+|||||+.+|+||||||||++||+.++.++.++|++ .+.|||+||
T Consensus 125 ~~~~l~~~~l~~~~~~~~~~~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~s 204 (252)
T PRK14239 125 VEKSLKGASIWDEVKDRLHDSALGLSGGQQQRVCIARVLATSPKIILLDEPTSALDPISAGKIEETLLGLKDDYTMLLVT 204 (252)
T ss_pred HHHHHHHcCCchhHHHHHhcCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHhhCCeEEEEE
Confidence 445566666531 245778999999999999999999999999999999999999999999888754 368999999
Q ss_pred cCHHHHHhhcCeEEEEecceEEEeccChHH
Q 005532 314 HDRAFLDQLCTKIVETEMGVSRTYEGNYSQ 343 (692)
Q Consensus 314 Hd~~~l~~~~d~i~~l~~G~~~~~~G~y~~ 343 (692)
||++++..+||+|+++++|++. +.|...+
T Consensus 205 H~~~~~~~~~d~i~~l~~G~i~-~~g~~~~ 233 (252)
T PRK14239 205 RSMQQASRISDRTGFFLDGDLI-EYNDTKQ 233 (252)
T ss_pred CCHHHHHHhCCEEEEEECCEEE-EeCCHHH
Confidence 9999999999999999999984 5565544
No 247
>PRK11701 phnK phosphonate C-P lyase system protein PhnK; Provisional
Probab=100.00 E-value=7.7e-40 Score=340.18 Aligned_cols=206 Identities=22% Similarity=0.342 Sum_probs=174.1
Q ss_pred ceEEEEeEEEEcCCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCcc-----ce--------
Q 005532 423 SVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHN-----VL-------- 489 (692)
Q Consensus 423 ~~l~~~~l~~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~-----~~-------- 489 (692)
++|+++|+++.|+++.+|+++||+|++|+++||+|+||||||||+++|+|+++|++|+|.++|.+ +.
T Consensus 5 ~~l~~~~l~~~~~~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~i~~~~~~~~~ 84 (258)
T PRK11701 5 PLLSVRGLTKLYGPRKGCRDVSFDLYPGEVLGIVGESGSGKTTLLNALSARLAPDAGEVHYRMRDGQLRDLYALSEAERR 84 (258)
T ss_pred ceEEEeeeEEEcCCceeeeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCccccccccccCCHHHHH
Confidence 47999999999988889999999999999999999999999999999999999999999998865 31
Q ss_pred ------eeeecccchhhcCCCccHHHHHHHHh---ccc----cHHHHHHHHhhcCCCcccccccCCCCCHHHHHHHHHHH
Q 005532 490 ------PNYFEQNQAEALDLDKTVLETVAEAA---EDW----RIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCK 556 (692)
Q Consensus 490 ------~~~~~q~~~~~l~~~~tv~e~~~~~~---~~~----~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~LAr 556 (692)
.+|++|+....+.+..++.+++.... ... ....+.++++.+++.....++++.+|||||||||+|||
T Consensus 85 ~~~~~~i~~v~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LS~Gq~qrl~lar 164 (258)
T PRK11701 85 RLLRTEWGFVHQHPRDGLRMQVSAGGNIGERLMAVGARHYGDIRATAGDWLERVEIDAARIDDLPTTFSGGMQQRLQIAR 164 (258)
T ss_pred HHhhcceEEEeeCcccccCccccHHHHHHHHHHHhccCcHHHHHHHHHHHHHHcCCChhHHhCCCccCCHHHHHHHHHHH
Confidence 35666664334556678888875421 111 12346788999999544678999999999999999999
Q ss_pred HhccCCcEEEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEECCEEEEecCChhHHH
Q 005532 557 FMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYYL 629 (692)
Q Consensus 557 al~~~p~lLlLDEPTn~LD~~~~~~l~~~l~~~----~~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~~~~ 629 (692)
||+.+|+||||||||++||+.+++++.+.|+++ +.|||+||||++++..+||+|++|++|+++. .|..+++.
T Consensus 165 al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~isH~~~~~~~~~d~i~~l~~g~i~~-~~~~~~~~ 240 (258)
T PRK11701 165 NLVTHPRLVFMDEPTGGLDVSVQARLLDLLRGLVRELGLAVVIVTHDLAVARLLAHRLLVMKQGRVVE-SGLTDQVL 240 (258)
T ss_pred HHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhcCEEEEEECCEEEE-eCCHHHHh
Confidence 999999999999999999999999999998753 5699999999999999999999999999974 46655543
No 248
>cd03299 ABC_ModC_like Archeal protein closely related to ModC. ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.7e-40 Score=335.94 Aligned_cols=205 Identities=30% Similarity=0.427 Sum_probs=173.3
Q ss_pred EEEEeEEEEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC--------ceEEEEccc
Q 005532 98 VKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN--------MKIAFLSQE 169 (692)
Q Consensus 98 l~i~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~--------~~i~~v~Q~ 169 (692)
|+++|+++.|++. +|+|+||+|.+|++++|+|+||||||||+++|+|+++|++|+|.++|.+ ..++|++|+
T Consensus 1 l~~~~l~~~~~~~-~l~~is~~i~~Ge~~~i~G~nG~GKStLl~~l~G~~~p~~G~v~i~g~~~~~~~~~~~~i~~~~q~ 79 (235)
T cd03299 1 LKVENLSKDWKEF-KLKNVSLEVERGDYFVILGPTGSGKSVLLETIAGFIKPDSGKILLNGKDITNLPPEKRDISYVPQN 79 (235)
T ss_pred CeeEeEEEEeCCc-eeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcCcCChhHcCEEEEeec
Confidence 4689999999865 8999999999999999999999999999999999999999999998742 269999999
Q ss_pred CccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHHhhhcCCC
Q 005532 170 FEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFT 249 (692)
Q Consensus 170 ~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl~ 249 (692)
+.+++..|+.+|+...+.. . ....+....++.++++.+|+.
T Consensus 80 ~~~~~~~t~~e~l~~~~~~---------------~------------------------~~~~~~~~~~~~~~l~~~~l~ 120 (235)
T cd03299 80 YALFPHMTVYKNIAYGLKK---------------R------------------------KVDKKEIERKVLEIAEMLGID 120 (235)
T ss_pred CccCCCccHHHHHHHHHHH---------------c------------------------CCCHHHHHHHHHHHHHHcCCh
Confidence 8887788999998532100 0 001112334566788888986
Q ss_pred ccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc----CCCeEEEEecCHHHHHhhcCe
Q 005532 250 ADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVIISHDRAFLDQLCTK 325 (692)
Q Consensus 250 ~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~----~~~tvI~vsHd~~~l~~~~d~ 325 (692)
...++++.+|||||+||++|||||+.+|++|||||||++||+.+++++.+.|++ .+.|||++||+++++..+||+
T Consensus 121 -~~~~~~~~~LS~G~~qrl~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~~~~~~~~tili~tH~~~~~~~~~d~ 199 (235)
T cd03299 121 -HLLNRKPETLSGGEQQRVAIARALVVNPKILLLDEPFSALDVRTKEKLREELKKIRKEFGVTVLHVTHDFEEAWALADK 199 (235)
T ss_pred -hHHhcCcccCCHHHHHHHHHHHHHHcCCCEEEECCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCE
Confidence 567888999999999999999999999999999999999999999999887753 389999999999999999999
Q ss_pred EEEEecceEEEeccChHHH
Q 005532 326 IVETEMGVSRTYEGNYSQY 344 (692)
Q Consensus 326 i~~l~~G~~~~~~G~y~~~ 344 (692)
|+++++|++. ..|.+++.
T Consensus 200 i~~l~~G~i~-~~~~~~~~ 217 (235)
T cd03299 200 VAIMLNGKLI-QVGKPEEV 217 (235)
T ss_pred EEEEECCEEE-EecCHHHH
Confidence 9999999984 55665443
No 249
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.5e-40 Score=331.03 Aligned_cols=192 Identities=27% Similarity=0.391 Sum_probs=167.5
Q ss_pred EEEEeEEEEcCCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccce---------eeeecc
Q 005532 425 VTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL---------PNYFEQ 495 (692)
Q Consensus 425 l~~~~l~~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~~---------~~~~~q 495 (692)
|+++|+++.|+++++|+++||+|++| +++|+||||||||||+++|+|+++|++|+|.++|.++. .+|++|
T Consensus 1 i~~~~~~~~~~~~~~l~~vs~~i~~g-~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~i~~~~q 79 (211)
T cd03264 1 LQLENLTKRYGKKRALDGVSLTLGPG-MYGLLGPNGAGKTTLMRILATLTPPSSGTIRIDGQDVLKQPQKLRRRIGYLPQ 79 (211)
T ss_pred CEEEEEEEEECCEEEEcceeEEEcCC-cEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCCccccchHHHHhheEEecC
Confidence 47899999998888999999999999 99999999999999999999999999999999986542 345665
Q ss_pred cchhhcCCCccHHHHHHHHhcc-----c-cHHHHHHHHhhcCCCcccccccCCCCCHHHHHHHHHHHHhccCCcEEEEeC
Q 005532 496 NQAEALDLDKTVLETVAEAAED-----W-RIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDE 569 (692)
Q Consensus 496 ~~~~~l~~~~tv~e~~~~~~~~-----~-~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~LAral~~~p~lLlLDE 569 (692)
+. .+++..|+.+|+...... . ....+.++++.+++. ...++++.+|||||||||+|||||+.+|++|||||
T Consensus 80 ~~--~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LS~G~~qrv~la~al~~~p~llllDE 156 (211)
T cd03264 80 EF--GVYPNFTVREFLDYIAWLKGIPSKEVKARVDEVLELVNLG-DRAKKKIGSLSGGMRRRVGIAQALVGDPSILIVDE 156 (211)
T ss_pred CC--cccccCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHCCCH-HHHhCchhhCCHHHHHHHHHHHHHhcCCCEEEEcC
Confidence 43 456678999998753211 1 123577889999995 56788999999999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhccEEEEEECCEEEE
Q 005532 570 PTNHLDIPSKEMLEEAISEY--KGTVITVSHDRYFVKQIVNRVVEVKGSNLQD 620 (692)
Q Consensus 570 PTn~LD~~~~~~l~~~l~~~--~~tviivSHd~~~l~~~~d~i~~l~~g~l~~ 620 (692)
||++||+.+++++.+.|+++ +.|||+||||++++.++||++++|++|++..
T Consensus 157 Pt~~LD~~~~~~l~~~l~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~g~i~~ 209 (211)
T cd03264 157 PTAGLDPEERIRFRNLLSELGEDRIVILSTHIVEDVESLCNQVAVLNKGKLVF 209 (211)
T ss_pred CcccCCHHHHHHHHHHHHHHhCCCEEEEEcCCHHHHHHhCCEEEEEECCEEEe
Confidence 99999999999999999876 4699999999999999999999999999874
No 250
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=6.3e-40 Score=335.40 Aligned_cols=200 Identities=26% Similarity=0.400 Sum_probs=171.8
Q ss_pred EEEEeEEEEcCCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccce-----------eeee
Q 005532 425 VTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL-----------PNYF 493 (692)
Q Consensus 425 l~~~~l~~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~~-----------~~~~ 493 (692)
|+++||++.|+++.+|+++||+|.+|+++||+|+||||||||+++|+|+++|++|+|.++|.++. .+|+
T Consensus 1 l~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i~~~ 80 (232)
T cd03218 1 LRAENLSKRYGKRKVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVKPDSGKILLDGQDITKLPMHKRARLGIGYL 80 (232)
T ss_pred CeEEEEEEEeCCEEeeccceeEecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccCCHhHHHhccEEEe
Confidence 47899999999889999999999999999999999999999999999999999999999886531 3455
Q ss_pred cccchhhcCCCccHHHHHHHHhcc--cc----HHHHHHHHhhcCCCcccccccCCCCCHHHHHHHHHHHHhccCCcEEEE
Q 005532 494 EQNQAEALDLDKTVLETVAEAAED--WR----IDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVL 567 (692)
Q Consensus 494 ~q~~~~~l~~~~tv~e~~~~~~~~--~~----~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~LAral~~~p~lLlL 567 (692)
+|.. .+.+..|+.+|+...... .. ...+.++++.+++. ...++++.+|||||||||+|||||+.+|++|||
T Consensus 81 ~q~~--~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LS~G~~qrl~la~al~~~p~llll 157 (232)
T cd03218 81 PQEA--SIFRKLTVEENILAVLEIRGLSKKEREEKLEELLEEFHIT-HLRKSKASSLSGGERRRVEIARALATNPKFLLL 157 (232)
T ss_pred cCCc--cccccCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCh-hhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEe
Confidence 5543 456678999998754211 11 23467889999995 567899999999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhccEEEEEECCEEEEecCChhHH
Q 005532 568 DEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYY 628 (692)
Q Consensus 568 DEPTn~LD~~~~~~l~~~l~~~---~~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~~~ 628 (692)
||||++||+.+++.+.+.|+++ +.|||+||||++++..+||+|++|++|++.. .|+.+++
T Consensus 158 DEPt~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~-~~~~~~~ 220 (232)
T cd03218 158 DEPFAGVDPIAVQDIQKIIKILKDRGIGVLITDHNVRETLSITDRAYIIYEGKVLA-EGTPEEI 220 (232)
T ss_pred cCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCeEEE-EeCHHHh
Confidence 9999999999999999998765 4599999999999999999999999999974 5666554
No 251
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.1e-40 Score=336.36 Aligned_cols=201 Identities=27% Similarity=0.409 Sum_probs=172.5
Q ss_pred eEEEEeEEEEcCCe----ecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccce----------
Q 005532 424 VVTIKNLEFGYEDR----LLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL---------- 489 (692)
Q Consensus 424 ~l~~~~l~~~y~~~----~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~~---------- 489 (692)
+|+++|++++|+++ ++|+++||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++.
T Consensus 1 ~i~~~~l~~~~~~~~~~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 80 (233)
T cd03258 1 MIELKNVSKVFGDTGGKVTALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLERPTSGSVLVDGTDLTLLSGKELRKA 80 (233)
T ss_pred CeEEecceEEccCCCCceeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHH
Confidence 47899999999876 8999999999999999999999999999999999999999999999987542
Q ss_pred ---eeeecccchhhcCCCccHHHHHHHHhcc--cc----HHHHHHHHhhcCCCcccccccCCCCCHHHHHHHHHHHHhcc
Q 005532 490 ---PNYFEQNQAEALDLDKTVLETVAEAAED--WR----IDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVK 560 (692)
Q Consensus 490 ---~~~~~q~~~~~l~~~~tv~e~~~~~~~~--~~----~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~LAral~~ 560 (692)
.+|++|+ ..+++..|+.+|+...... .. ...+.++++.+++. +..++++.+|||||||||+|||||+.
T Consensus 81 ~~~i~~~~q~--~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LS~G~~qrv~la~al~~ 157 (233)
T cd03258 81 RRRIGMIFQH--FNLLSSRTVFENVALPLEIAGVPKAEIEERVLELLELVGLE-DKADAYPAQLSGGQKQRVGIARALAN 157 (233)
T ss_pred HhheEEEccC--cccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCh-hhhhcChhhCCHHHHHHHHHHHHHhc
Confidence 2355554 3455678999998754211 11 23577899999995 56788999999999999999999999
Q ss_pred CCcEEEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEECCEEEEecCChhHH
Q 005532 561 PSTLLVLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYY 628 (692)
Q Consensus 561 ~p~lLlLDEPTn~LD~~~~~~l~~~l~~~----~~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~~~ 628 (692)
+|++|||||||++||+.++..+.+.|.++ +.|||+||||.+++..+||++++|++|++.. .|+.+++
T Consensus 158 ~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~-~~~~~~~ 228 (233)
T cd03258 158 NPKVLLCDEATSALDPETTQSILALLRDINRELGLTIVLITHEMEVVKRICDRVAVMEKGEVVE-EGTVEEV 228 (233)
T ss_pred CCCEEEecCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEE-ecCHHHH
Confidence 99999999999999999999999999865 4599999999999999999999999999984 4665544
No 252
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.7e-40 Score=339.97 Aligned_cols=210 Identities=20% Similarity=0.287 Sum_probs=170.2
Q ss_pred CCcEEEEeEEEEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCC--C---CccEEEECCCC---------
Q 005532 95 SSGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEE--P---DSGNVIKAKSN--------- 160 (692)
Q Consensus 95 ~~~l~i~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~--p---~~G~I~~~~~~--------- 160 (692)
.++|+++|+++.|+++++|+|+||+|++|++++|+|+||||||||+++|+|+++ | ++|+|.++|.+
T Consensus 10 ~~~l~i~~l~~~~~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~p~~~~~G~i~~~g~~~~~~~~~~~ 89 (259)
T PRK14274 10 QEVYQINGMNLWYGQHHALKNINLSIPENEVTAIIGPSGCGKSTFIKTLNLMIQMVPNVKLTGEMNYNGSNILKGKVDLV 89 (259)
T ss_pred CceEEEeeEEEEECCeeeEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceEEEECCEEccccccCHH
Confidence 346999999999998889999999999999999999999999999999999987 3 58999988642
Q ss_pred ---ceEEEEcccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHH
Q 005532 161 ---MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDA 237 (692)
Q Consensus 161 ---~~i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (692)
..|+|++|++.++. .|+++|+..... . .. .........
T Consensus 90 ~~~~~i~~v~q~~~~~~-~tv~enl~~~~~--~-------------~~-----------------------~~~~~~~~~ 130 (259)
T PRK14274 90 ELRKNIGMVFQKGNPFP-QSIFDNVAYGPR--I-------------HG-----------------------TKNKKKLQE 130 (259)
T ss_pred HHhhceEEEecCCcccc-cCHHHHHHhHHH--h-------------cC-----------------------CCCHHHHHH
Confidence 24999999988765 499999852110 0 00 000011223
Q ss_pred HHHHHhhhcCCCc---cccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc--CCCeEEEE
Q 005532 238 KVSKLMPELGFTA---DDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVII 312 (692)
Q Consensus 238 ~i~~ll~~lgl~~---~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~--~~~tvI~v 312 (692)
++.++++.+|+.+ ...++++.+||||||||++|||||+.+|+||||||||++||+.++..+.++|++ .+.|||+|
T Consensus 131 ~~~~~l~~~~l~~~~~~~l~~~~~~LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiiv 210 (259)
T PRK14274 131 IVEKSLKDVALWDEVKDRLHTQALSLSGGQQQRLCIARALATNPDVLLMDEPTSALDPVSTRKIEELILKLKEKYTIVIV 210 (259)
T ss_pred HHHHHHHHcCCchhhhhhhhCCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhcCCEEEEE
Confidence 4556677777642 245788999999999999999999999999999999999999999999887754 36899999
Q ss_pred ecCHHHHHhhcCeEEEEecceEEEeccChHHH
Q 005532 313 SHDRAFLDQLCTKIVETEMGVSRTYEGNYSQY 344 (692)
Q Consensus 313 sHd~~~l~~~~d~i~~l~~G~~~~~~G~y~~~ 344 (692)
||+++++..+||+|+++++|++. ..|...++
T Consensus 211 tH~~~~~~~~~d~i~~l~~G~i~-~~g~~~~~ 241 (259)
T PRK14274 211 THNMQQAARVSDQTAFFYMGELV-ECNDTNKM 241 (259)
T ss_pred EcCHHHHHHhCCEEEEEECCEEE-EECCHHHH
Confidence 99999999999999999999984 45665443
No 253
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.8e-40 Score=337.17 Aligned_cols=197 Identities=28% Similarity=0.401 Sum_probs=170.0
Q ss_pred eEEEEeEEEEcCCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccce----------eeee
Q 005532 424 VVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL----------PNYF 493 (692)
Q Consensus 424 ~l~~~~l~~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~~----------~~~~ 493 (692)
.|+++|+++.|+++.+|+++||+|.+|++++|+||||||||||+++|+|+++|++|+|.++|.++. .+|+
T Consensus 3 ~l~~~~l~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~i~~~ 82 (241)
T PRK14250 3 EIEFKEVSYSSFGKEILKDISVKFEGGAIYTIVGPSGAGKSTLIKLINRLIDPTEGSILIDGVDIKTIDVIDLRRKIGMV 82 (241)
T ss_pred eEEEEeEEEEeCCeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcChHHhhhcEEEE
Confidence 589999999998888999999999999999999999999999999999999999999999986542 3466
Q ss_pred cccchhhcCCCccHHHHHHHHhc--cccHHHHHHHHhhcCCCcccccccCCCCCHHHHHHHHHHHHhccCCcEEEEeCCC
Q 005532 494 EQNQAEALDLDKTVLETVAEAAE--DWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPT 571 (692)
Q Consensus 494 ~q~~~~~l~~~~tv~e~~~~~~~--~~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~LAral~~~p~lLlLDEPT 571 (692)
+|+. .+. ..|+.+|+..... .....++.++++.+++.....++++.+|||||||||+|||||+.+|++|||||||
T Consensus 83 ~q~~--~~~-~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LS~G~~qrl~la~al~~~p~llllDEPt 159 (241)
T PRK14250 83 FQQP--HLF-EGTVKDNIEYGPMLKGEKNVDVEYYLSIVGLNKEYATRDVKNLSGGEAQRVSIARTLANNPEVLLLDEPT 159 (241)
T ss_pred ecCc--hhc-hhhHHHHHhcchhhcCcHHHHHHHHHHHcCCCHHHhhCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCc
Confidence 6653 333 3699999864321 1123457788999999545678899999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEECCEEEEecC
Q 005532 572 NHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAG 623 (692)
Q Consensus 572 n~LD~~~~~~l~~~l~~~----~~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g 623 (692)
++||+.+++.+.+.|+++ +.|||+||||++++..+||+|++|++|++.....
T Consensus 160 ~~LD~~~~~~l~~~l~~~~~~~g~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~ 215 (241)
T PRK14250 160 SALDPTSTEIIEELIVKLKNKMNLTVIWITHNMEQAKRIGDYTAFLNKGILVEYAK 215 (241)
T ss_pred ccCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHHHHHHhCCEEEEEeCCEEEEeCC
Confidence 999999999999998764 5699999999999999999999999999986533
No 254
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=100.00 E-value=6.5e-40 Score=339.12 Aligned_cols=202 Identities=26% Similarity=0.431 Sum_probs=173.1
Q ss_pred eEEEEeEEEEcCCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccce--------------
Q 005532 424 VVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL-------------- 489 (692)
Q Consensus 424 ~l~~~~l~~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~~-------------- 489 (692)
+|+++||++.|+++.+|+++||+|++|+++||+|+||||||||+++|+|+++|++|+|.++|.++.
T Consensus 3 ~l~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~ 82 (250)
T PRK11264 3 AIEVKNLVKKFHGQTVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRCINLLEQPEAGTIRVGDITIDTARSLSQQKGLIRQ 82 (250)
T ss_pred cEEEeceEEEECCeeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccccccchhhHHHH
Confidence 699999999999888999999999999999999999999999999999999999999999876432
Q ss_pred ----eeeecccchhhcCCCccHHHHHHHHh---cccc----HHHHHHHHhhcCCCcccccccCCCCCHHHHHHHHHHHHh
Q 005532 490 ----PNYFEQNQAEALDLDKTVLETVAEAA---EDWR----IDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFM 558 (692)
Q Consensus 490 ----~~~~~q~~~~~l~~~~tv~e~~~~~~---~~~~----~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~LAral 558 (692)
.+|++|+ ..+.+..|+.+|+.... .... ...+.++++.+|+. ...++++.+|||||||||+|||||
T Consensus 83 ~~~~i~~v~q~--~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~-~~~~~~~~~LS~Gq~qrv~la~al 159 (250)
T PRK11264 83 LRQHVGFVFQN--FNLFPHRTVLENIIEGPVIVKGEPKEEATARARELLAKVGLA-GKETSYPRRLSGGQQQRVAIARAL 159 (250)
T ss_pred hhhhEEEEecC--cccCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCc-chhhCChhhCChHHHHHHHHHHHH
Confidence 2455554 34556789999986531 1111 23467889999995 557889999999999999999999
Q ss_pred ccCCcEEEEeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhccEEEEEECCEEEEecCChhHHH
Q 005532 559 VKPSTLLVLDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYYL 629 (692)
Q Consensus 559 ~~~p~lLlLDEPTn~LD~~~~~~l~~~l~~~---~~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~~~~ 629 (692)
+.+|+||||||||++||+.+++.+.+.|.++ +.|||+||||.+++..+||+|++|++|++.. .|+.+++.
T Consensus 160 ~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~-~~~~~~~~ 232 (250)
T PRK11264 160 AMRPEVILFDEPTSALDPELVGEVLNTIRQLAQEKRTMVIVTHEMSFARDVADRAIFMDQGRIVE-QGPAKALF 232 (250)
T ss_pred hcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEE-eCCHHHHh
Confidence 9999999999999999999999999998765 4699999999999999999999999999974 46666554
No 255
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.7e-40 Score=337.07 Aligned_cols=208 Identities=24% Similarity=0.320 Sum_probs=170.7
Q ss_pred cEEEEeEEEEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCC---CCccEEEECCCC----------ceE
Q 005532 97 GVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEE---PDSGNVIKAKSN----------MKI 163 (692)
Q Consensus 97 ~l~i~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~---p~~G~I~~~~~~----------~~i 163 (692)
+++++|+++.|+++++|+|+||+|++|++++|+|+||||||||+++|+|+++ |++|+|.++|.+ ..|
T Consensus 2 ~~~~~~l~~~~~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~G~i~~~g~~i~~~~~~~~~~~i 81 (246)
T PRK14269 2 IAKTTNLNLFYGKKQALFDINMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKIDGLVEIEGKDVKNQDVVALRKNV 81 (246)
T ss_pred ceeeeeeEEEECCEeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCCceEEEECCEecccCCHHHHhhhE
Confidence 4889999999998889999999999999999999999999999999999974 699999998743 259
Q ss_pred EEEcccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHHh
Q 005532 164 AFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLM 243 (692)
Q Consensus 164 ~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll 243 (692)
+|++|++.++. .|+++|+..... +.... ........++.+++
T Consensus 82 ~~~~q~~~l~~-~tv~eni~~~~~---------------~~~~~----------------------~~~~~~~~~~~~~l 123 (246)
T PRK14269 82 GMVFQQPNVFV-KSIYENISYAPK---------------LHGMI----------------------KNKDEEEALVVDCL 123 (246)
T ss_pred EEEecCCcccc-ccHHHHhhhHHh---------------hcCcc----------------------cChHHHHHHHHHHH
Confidence 99999998765 699999853210 00000 00011234456777
Q ss_pred hhcCCCc---cccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc--CCCeEEEEecCHHH
Q 005532 244 PELGFTA---DDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVIISHDRAF 318 (692)
Q Consensus 244 ~~lgl~~---~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~--~~~tvI~vsHd~~~ 318 (692)
+.+|+.+ ...++++.+|||||+|||+|||||+.+|+||||||||++||+.++.++.+.|++ .++|||+|||++++
T Consensus 124 ~~~~l~~~~~~~~~~~~~~LS~G~~qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~ 203 (246)
T PRK14269 124 QKVGLFEEVKDKLKQNALALSGGQQQRLCIARALAIKPKLLLLDEPTSALDPISSGVIEELLKELSHNLSMIMVTHNMQQ 203 (246)
T ss_pred HHcCCChhhhHHhcCCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhCCCEEEEEecCHHH
Confidence 8888842 235778899999999999999999999999999999999999999999888753 48899999999999
Q ss_pred HHhhcCeEEEEecceEEEeccChHH
Q 005532 319 LDQLCTKIVETEMGVSRTYEGNYSQ 343 (692)
Q Consensus 319 l~~~~d~i~~l~~G~~~~~~G~y~~ 343 (692)
+..+||+|+++++|++. ..|...+
T Consensus 204 ~~~~~d~i~~l~~G~i~-~~g~~~~ 227 (246)
T PRK14269 204 GKRVADYTAFFHLGELI-EFGESKE 227 (246)
T ss_pred HHhhCcEEEEEECCEEE-EECCHHH
Confidence 99999999999999984 4565433
No 256
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=6.9e-40 Score=353.69 Aligned_cols=203 Identities=28% Similarity=0.418 Sum_probs=177.6
Q ss_pred eEEEEeEEEEcCCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccce--------eeeecc
Q 005532 424 VVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL--------PNYFEQ 495 (692)
Q Consensus 424 ~l~~~~l~~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~~--------~~~~~q 495 (692)
+|+++|+++.|+++.+|+++||+|++||+++|+|||||||||||++|+|+++|++|+|.++|.++. .+|++|
T Consensus 2 ~L~i~~l~~~~~~~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~~~r~i~~v~Q 81 (353)
T PRK10851 2 SIEIANIKKSFGRTQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEHQTSGHIRFHGTDVSRLHARDRKVGFVFQ 81 (353)
T ss_pred EEEEEEEEEEeCCeEEEEEeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHCCEEEEec
Confidence 489999999999888999999999999999999999999999999999999999999999987652 456666
Q ss_pred cchhhcCCCccHHHHHHHHhcc------cc----HHHHHHHHhhcCCCcccccccCCCCCHHHHHHHHHHHHhccCCcEE
Q 005532 496 NQAEALDLDKTVLETVAEAAED------WR----IDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLL 565 (692)
Q Consensus 496 ~~~~~l~~~~tv~e~~~~~~~~------~~----~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~LAral~~~p~lL 565 (692)
+ ..+++.+|+.+|+...... .. ...+.++|+.+++. +..++++.+|||||||||+|||||+.+|+||
T Consensus 82 ~--~~l~p~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~L~-~~~~~~~~~LSgGq~QRvalArAL~~~P~ll 158 (353)
T PRK10851 82 H--YALFRHMTVFDNIAFGLTVLPRRERPNAAAIKAKVTQLLEMVQLA-HLADRYPAQLSGGQKQRVALARALAVEPQIL 158 (353)
T ss_pred C--cccCCCCcHHHHHHhhhhhcccccCCCHHHHHHHHHHHHHHcCCc-hhhhCChhhCCHHHHHHHHHHHHHhcCCCEE
Confidence 5 4577889999999865321 11 23577899999995 6789999999999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEECCEEEEecCChhHHHH
Q 005532 566 VLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYYLE 630 (692)
Q Consensus 566 lLDEPTn~LD~~~~~~l~~~l~~~----~~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~~~~~ 630 (692)
||||||++||+.+++.+.+.|+++ +.|+|+||||++++..+||+|++|++|++..+ |..++...
T Consensus 159 LLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tii~vTHd~~ea~~~~Dri~vl~~G~i~~~-g~~~~i~~ 226 (353)
T PRK10851 159 LLDEPFGALDAQVRKELRRWLRQLHEELKFTSVFVTHDQEEAMEVADRVVVMSQGNIEQA-GTPDQVWR 226 (353)
T ss_pred EEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEE-cCHHHHHh
Confidence 999999999999999999888754 46999999999999999999999999999854 66655543
No 257
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6e-40 Score=346.38 Aligned_cols=203 Identities=26% Similarity=0.356 Sum_probs=173.8
Q ss_pred EEEEeEEEEcCC-----eecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccce----------
Q 005532 425 VTIKNLEFGYED-----RLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL---------- 489 (692)
Q Consensus 425 l~~~~l~~~y~~-----~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~~---------- 489 (692)
|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.++|.++.
T Consensus 3 l~~~~l~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (290)
T PRK13634 3 ITFQKVEHRYQYKTPFERRALYDVNVSIPSGSYVAIIGHTGSGKSTLLQHLNGLLQPTSGTVTIGERVITAGKKNKKLKP 82 (290)
T ss_pred EEEEEEEEEECCCCcccccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECccccccchHHH
Confidence 899999999974 46999999999999999999999999999999999999999999999987541
Q ss_pred ----eeeecccchhhcCCCccHHHHHHHHhcc----cc--HHHHHHHHhhcCCCcccccccCCCCCHHHHHHHHHHHHhc
Q 005532 490 ----PNYFEQNQAEALDLDKTVLETVAEAAED----WR--IDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMV 559 (692)
Q Consensus 490 ----~~~~~q~~~~~l~~~~tv~e~~~~~~~~----~~--~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~LAral~ 559 (692)
.+|++|+....+. ..|+.+|+...... +. ...+.++++.+++.....++++.+|||||||||+|||||+
T Consensus 83 ~~~~ig~v~q~~~~~l~-~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~~LSgGq~qrv~lAraL~ 161 (290)
T PRK13634 83 LRKKVGIVFQFPEHQLF-EETVEKDICFGPMNFGVSEEDAKQKAREMIELVGLPEELLARSPFELSGGQMRRVAIAGVLA 161 (290)
T ss_pred HHhhEEEEeeCchhhhh-hhhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCChhhhhCCcccCCHHHHHHHHHHHHHH
Confidence 3577776432343 57999999754321 11 1356788999999645678999999999999999999999
Q ss_pred cCCcEEEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEECCEEEEecCChhHHH
Q 005532 560 KPSTLLVLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYYL 629 (692)
Q Consensus 560 ~~p~lLlLDEPTn~LD~~~~~~l~~~l~~~----~~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~~~~ 629 (692)
.+|+||||||||++||+.++..+.+.|+++ +.|||+||||++++..+||||++|++|++. +.|+.+++.
T Consensus 162 ~~P~llllDEPt~~LD~~~~~~l~~~L~~l~~~~g~tviiitHd~~~~~~~~drv~~l~~G~i~-~~g~~~~~~ 234 (290)
T PRK13634 162 MEPEVLVLDEPTAGLDPKGRKEMMEMFYKLHKEKGLTTVLVTHSMEDAARYADQIVVMHKGTVF-LQGTPREIF 234 (290)
T ss_pred cCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEE-EECCHHHHh
Confidence 999999999999999999999999998765 469999999999999999999999999998 457766654
No 258
>PRK15112 antimicrobial peptide ABC system ATP-binding protein SapF; Provisional
Probab=100.00 E-value=6.8e-40 Score=342.17 Aligned_cols=207 Identities=22% Similarity=0.346 Sum_probs=174.3
Q ss_pred ceEEEEeEEEEcCC---------eecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccce----
Q 005532 423 SVVTIKNLEFGYED---------RLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL---- 489 (692)
Q Consensus 423 ~~l~~~~l~~~y~~---------~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~~---- 489 (692)
++|+++||+++|+. +++|+++||+|++|++++|+|||||||||||++|+|+++|++|+|.++|.++.
T Consensus 3 ~~l~~~~l~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~ 82 (267)
T PRK15112 3 TLLEVRNLSKTFRYRTGWFRRQTVEAVKPLSFTLREGQTLAIIGENGSGKSTLAKMLAGMIEPTSGELLIDDHPLHFGDY 82 (267)
T ss_pred ceEEEeceEEEecCCCCcccccccceeeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCch
Confidence 57999999999962 46999999999999999999999999999999999999999999999886542
Q ss_pred ------eeeecccchhhcCCCccHHHHHHHHhc---ccc----HHHHHHHHhhcCCCcccccccCCCCCHHHHHHHHHHH
Q 005532 490 ------PNYFEQNQAEALDLDKTVLETVAEAAE---DWR----IDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCK 556 (692)
Q Consensus 490 ------~~~~~q~~~~~l~~~~tv~e~~~~~~~---~~~----~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~LAr 556 (692)
.+|++|+....+.+..|+.+++..... ... .+.+.++++.+++.....++++.+|||||||||+|||
T Consensus 83 ~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LS~G~~qrv~lar 162 (267)
T PRK15112 83 SYRSQRIRMIFQDPSTSLNPRQRISQILDFPLRLNTDLEPEQREKQIIETLRQVGLLPDHASYYPHMLAPGQKQRLGLAR 162 (267)
T ss_pred hhHhccEEEEecCchhhcCcchhHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCCChHHHhcCchhcCHHHHHHHHHHH
Confidence 346666543234566788888754221 111 2357789999999545668889999999999999999
Q ss_pred HhccCCcEEEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEECCEEEEecCChhHHHH
Q 005532 557 FMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYYLE 630 (692)
Q Consensus 557 al~~~p~lLlLDEPTn~LD~~~~~~l~~~l~~~----~~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~~~~~ 630 (692)
||+.+|+||||||||++||+.+++.+.+.|.++ +.|||+||||++++..+||++++|++|++. ..|+++++..
T Consensus 163 al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tviivsH~~~~~~~~~d~i~~l~~G~i~-~~~~~~~~~~ 239 (267)
T PRK15112 163 ALILRPKVIIADEALASLDMSMRSQLINLMLELQEKQGISYIYVTQHLGMMKHISDQVLVMHQGEVV-ERGSTADVLA 239 (267)
T ss_pred HHHhCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEeCCHHHHHHhcCEEEEEECCEEE-ecCCHHHHhc
Confidence 999999999999999999999999999998864 469999999999999999999999999997 4677777654
No 259
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.6e-40 Score=344.79 Aligned_cols=204 Identities=23% Similarity=0.362 Sum_probs=172.7
Q ss_pred eEEEEeEEEEcCC-----eecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccce---------
Q 005532 424 VVTIKNLEFGYED-----RLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL--------- 489 (692)
Q Consensus 424 ~l~~~~l~~~y~~-----~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~~--------- 489 (692)
+|+++|+++.|++ +.+|+++||+|.+||++||+||||||||||+++|+|+++|++|+|.++|.++.
T Consensus 2 ~i~~~~l~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~iiG~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 81 (287)
T PRK13641 2 SIKFENVDYIYSPGTPMEKKGLDNISFELEEGSFVALVGHTGSGKSTLMQHFNALLKPSSGTITIAGYHITPETGNKNLK 81 (287)
T ss_pred EEEEEEEEEEcCCCCCccccceeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHH
Confidence 4889999999974 46999999999999999999999999999999999999999999999987541
Q ss_pred -----eeeecccchhhcCCCccHHHHHHHHhc--cc----cHHHHHHHHhhcCCCcccccccCCCCCHHHHHHHHHHHHh
Q 005532 490 -----PNYFEQNQAEALDLDKTVLETVAEAAE--DW----RIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFM 558 (692)
Q Consensus 490 -----~~~~~q~~~~~l~~~~tv~e~~~~~~~--~~----~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~LAral 558 (692)
.+|++|+....+. ..|+.+|+..... .. ....+.++++.+|+.....++++.+|||||||||+|||||
T Consensus 82 ~~~~~ig~v~q~~~~~~~-~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~~LSgGq~qrl~laral 160 (287)
T PRK13641 82 KLRKKVSLVFQFPEAQLF-ENTVLKDVEFGPKNFGFSEDEAKEKALKWLKKVGLSEDLISKSPFELSGGQMRRVAIAGVM 160 (287)
T ss_pred HHHhceEEEEeChhhhhc-cchHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCChhHhhCCcccCCHHHHHHHHHHHHH
Confidence 3466665322233 5799999875321 11 1234778899999953567899999999999999999999
Q ss_pred ccCCcEEEEeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhccEEEEEECCEEEEecCChhHHH
Q 005532 559 VKPSTLLVLDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYYL 629 (692)
Q Consensus 559 ~~~p~lLlLDEPTn~LD~~~~~~l~~~l~~~---~~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~~~~ 629 (692)
+.+|++|||||||++||+.++..+.+.|+++ +.|||+||||++++..+||+|++|++|++.. .|..+++.
T Consensus 161 ~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~~g~tvlivsH~~~~~~~~~d~v~~l~~G~i~~-~g~~~~~~ 233 (287)
T PRK13641 161 AYEPEILCLDEPAAGLDPEGRKEMMQLFKDYQKAGHTVILVTHNMDDVAEYADDVLVLEHGKLIK-HASPKEIF 233 (287)
T ss_pred HcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEE-eCCHHHHh
Confidence 9999999999999999999999999999876 3599999999999999999999999999974 56666554
No 260
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.3e-40 Score=347.36 Aligned_cols=204 Identities=24% Similarity=0.300 Sum_probs=172.7
Q ss_pred eEEEEeEEEEcCCe-----ecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccc----------
Q 005532 424 VVTIKNLEFGYEDR-----LLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNV---------- 488 (692)
Q Consensus 424 ~l~~~~l~~~y~~~-----~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~---------- 488 (692)
+|+++||++.|++. .+|+++||+|.+||++||+|+||||||||+++|+|+++|++|+|.++|.++
T Consensus 2 ~i~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~iiG~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 81 (305)
T PRK13651 2 QIKVKNIVKIFNKKLPTELKALDNVSVEINQGEFIAIIGQTGSGKTTFIEHLNALLLPDTGTIEWIFKDEKNKKKTKEKE 81 (305)
T ss_pred EEEEEEEEEEECCCCCccccceeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEEeceeccccccccccc
Confidence 48999999999753 599999999999999999999999999999999999999999999975432
Q ss_pred ------------------------eeeeecccchhhcCCCccHHHHHHHHhcc--c----cHHHHHHHHhhcCCCccccc
Q 005532 489 ------------------------LPNYFEQNQAEALDLDKTVLETVAEAAED--W----RIDDIKGLLGRCNFKADMLD 538 (692)
Q Consensus 489 ------------------------~~~~~~q~~~~~l~~~~tv~e~~~~~~~~--~----~~~~~~~~L~~~~l~~~~~~ 538 (692)
..+|++|++...+ +..|+.+|+...... . ....+.++++.+|+..+..+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l-~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~ 160 (305)
T PRK13651 82 KVLEKLVIQKTRFKKIKKIKEIRRRVGVVFQFAEYQL-FEQTIEKDIIFGPVSMGVSKEEAKKRAAKYIELVGLDESYLQ 160 (305)
T ss_pred ccccccccccccccccchHHHHHhceEEEeeCccccc-ccccHHHHHHhhHHHcCCCHHHHHHHHHHHHHHcCCChhhhh
Confidence 1357777643334 357999999754321 1 12357889999999646789
Q ss_pred ccCCCCCHHHHHHHHHHHHhccCCcEEEEeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhccEEEEEEC
Q 005532 539 RKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKG 615 (692)
Q Consensus 539 ~~~~~LSgGqkqrv~LAral~~~p~lLlLDEPTn~LD~~~~~~l~~~l~~~---~~tviivSHd~~~l~~~~d~i~~l~~ 615 (692)
+++.+|||||||||+|||+|+.+|+||||||||++||+.++..+.+.|+++ +.|||+||||++++..+||||++|++
T Consensus 161 ~~~~~LSgGqkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivtHd~~~~~~~adrv~vl~~ 240 (305)
T PRK13651 161 RSPFELSGGQKRRVALAGILAMEPDFLVFDEPTAGLDPQGVKEILEIFDNLNKQGKTIILVTHDLDNVLEWTKRTIFFKD 240 (305)
T ss_pred CChhhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeeCHHHHHHhCCEEEEEEC
Confidence 999999999999999999999999999999999999999999999998765 56999999999999999999999999
Q ss_pred CEEEEecCChhHHH
Q 005532 616 SNLQDYAGDYNYYL 629 (692)
Q Consensus 616 g~l~~~~g~~~~~~ 629 (692)
|+++. .|..++..
T Consensus 241 G~i~~-~g~~~~~~ 253 (305)
T PRK13651 241 GKIIK-DGDTYDIL 253 (305)
T ss_pred CEEEE-ECCHHHHh
Confidence 99975 46555543
No 261
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.6e-40 Score=344.32 Aligned_cols=205 Identities=26% Similarity=0.404 Sum_probs=174.1
Q ss_pred eEEEEeEEEEcCC-----eecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccce---------
Q 005532 424 VVTIKNLEFGYED-----RLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL--------- 489 (692)
Q Consensus 424 ~l~~~~l~~~y~~-----~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~~--------- 489 (692)
.|+++||++.|++ +++|+++||+|++||++||+|+||||||||+++|+|+++|++|+|.++|.++.
T Consensus 2 ~l~~~~l~~~y~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 81 (287)
T PRK13637 2 SIKIENLTHIYMEGTPFEKKALDNVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLKPTSGKIIIDGVDITDKKVKLSDI 81 (287)
T ss_pred EEEEEEEEEECCCCCccccceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCccEEEECCEECCCcCccHHHH
Confidence 3899999999974 46999999999999999999999999999999999999999999999886542
Q ss_pred ---eeeecccchhhcCCCccHHHHHHHHhcc--cc----HHHHHHHHhhcCCCc-ccccccCCCCCHHHHHHHHHHHHhc
Q 005532 490 ---PNYFEQNQAEALDLDKTVLETVAEAAED--WR----IDDIKGLLGRCNFKA-DMLDRKVSLLSGGEKARLAFCKFMV 559 (692)
Q Consensus 490 ---~~~~~q~~~~~l~~~~tv~e~~~~~~~~--~~----~~~~~~~L~~~~l~~-~~~~~~~~~LSgGqkqrv~LAral~ 559 (692)
.+|++|+....+ +..|+.+|+...... .. ...+.++++.+|+.. ...++++.+|||||||||+|||||+
T Consensus 82 ~~~ig~v~q~~~~~~-~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~~~LSgGq~qrv~iAraL~ 160 (287)
T PRK13637 82 RKKVGLVFQYPEYQL-FEETIEKDIAFGPINLGLSEEEIENRVKRAMNIVGLDYEDYKDKSPFELSGGQKRRVAIAGVVA 160 (287)
T ss_pred hhceEEEecCchhcc-ccccHHHHHHhHHHHCCCCHHHHHHHHHHHHHHcCCCchhhccCCcccCCHHHHHHHHHHHHHH
Confidence 357777643223 357999999754221 11 234778999999952 4578999999999999999999999
Q ss_pred cCCcEEEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEECCEEEEecCChhHHHH
Q 005532 560 KPSTLLVLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYYLE 630 (692)
Q Consensus 560 ~~p~lLlLDEPTn~LD~~~~~~l~~~l~~~----~~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~~~~~ 630 (692)
.+|+||||||||++||+.++.++.++|+++ +.|||+||||++++..+||||++|++|++.. .|..+++..
T Consensus 161 ~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~~~~~~~drv~~l~~G~i~~-~g~~~~~~~ 234 (287)
T PRK13637 161 MEPKILILDEPTAGLDPKGRDEILNKIKELHKEYNMTIILVSHSMEDVAKLADRIIVMNKGKCEL-QGTPREVFK 234 (287)
T ss_pred cCCCEEEEECCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEE-ECCHHHHHh
Confidence 999999999999999999999999999765 4599999999999999999999999999985 577666543
No 262
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=4.7e-40 Score=331.44 Aligned_cols=190 Identities=35% Similarity=0.515 Sum_probs=162.9
Q ss_pred EEEeEEEEcCC--eecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccce----------eeee
Q 005532 426 TIKNLEFGYED--RLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL----------PNYF 493 (692)
Q Consensus 426 ~~~~l~~~y~~--~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~~----------~~~~ 493 (692)
+++|+++.|++ +.+|+++||+|++|+++||+||||||||||+++|+|+++|++|+|.++|.++. .+|+
T Consensus 1 ~~~~l~~~~~~~~~~il~~vs~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~~ 80 (211)
T cd03225 1 ELKNLSFSYPDGARPALDDISLTIKKGEFVLIVGPNGSGKSTLLRLLNGLLGPTSGEVLVDGKDLTKLSLKELRRKVGLV 80 (211)
T ss_pred CceeEEEecCCCCeeeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEcccCCHHHHHhhceEE
Confidence 36899999987 78999999999999999999999999999999999999999999999886542 3466
Q ss_pred cccchhhcCCCccHHHHHHHHhcc--c----cHHHHHHHHhhcCCCcccccccCCCCCHHHHHHHHHHHHhccCCcEEEE
Q 005532 494 EQNQAEALDLDKTVLETVAEAAED--W----RIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVL 567 (692)
Q Consensus 494 ~q~~~~~l~~~~tv~e~~~~~~~~--~----~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~LAral~~~p~lLlL 567 (692)
+|... ...+..|+.+|+...... . ....+.++++.+++. ...++++.+|||||||||+|||||+.+|++|||
T Consensus 81 ~q~~~-~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LSgG~~qrv~laral~~~p~llll 158 (211)
T cd03225 81 FQNPD-DQFFGPTVEEEVAFGLENLGLPEEEIEERVEEALELVGLE-GLRDRSPFTLSGGQKQRVAIAGVLAMDPDILLL 158 (211)
T ss_pred ecChh-hhcCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCcH-hhhcCCcccCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 66431 123468999998754211 1 123567889999995 567899999999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhccEEEEEECCE
Q 005532 568 DEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKGSN 617 (692)
Q Consensus 568 DEPTn~LD~~~~~~l~~~l~~~---~~tviivSHd~~~l~~~~d~i~~l~~g~ 617 (692)
||||++||+.+++++.+.|.++ +.|||+||||++++..+||+|++|++|+
T Consensus 159 DEPt~~LD~~~~~~~~~~l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~G~ 211 (211)
T cd03225 159 DEPTAGLDPAGRRELLELLKKLKAEGKTIIIVTHDLDLLLELADRVIVLEDGK 211 (211)
T ss_pred cCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCC
Confidence 9999999999999999999876 3599999999999999999999999874
No 263
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=5.8e-40 Score=332.91 Aligned_cols=197 Identities=26% Similarity=0.393 Sum_probs=170.3
Q ss_pred EEEEeEEEEcCC--eecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccce---------eeee
Q 005532 425 VTIKNLEFGYED--RLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL---------PNYF 493 (692)
Q Consensus 425 l~~~~l~~~y~~--~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~~---------~~~~ 493 (692)
|+++||++.|++ +++|+++||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++. .+|+
T Consensus 1 l~~~~l~~~~~~~~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~i~~v 80 (220)
T cd03263 1 LQIRNLTKTYKKGTKPAVDDLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELRPTSGTAYINGYSIRTDRKAARQSLGYC 80 (220)
T ss_pred CEEEeeEEEeCCCCceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccchHHHhhhEEEe
Confidence 578999999987 78999999999999999999999999999999999999999999999987642 3566
Q ss_pred cccchhhcCCCccHHHHHHHHhc--ccc----HHHHHHHHhhcCCCcccccccCCCCCHHHHHHHHHHHHhccCCcEEEE
Q 005532 494 EQNQAEALDLDKTVLETVAEAAE--DWR----IDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVL 567 (692)
Q Consensus 494 ~q~~~~~l~~~~tv~e~~~~~~~--~~~----~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~LAral~~~p~lLlL 567 (692)
.|+. .+.+..|+.+|+..... ... ...+.++++.+++. +..++++.+|||||||||+|||||+.+|++|||
T Consensus 81 ~q~~--~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LS~G~~qrv~la~al~~~p~llll 157 (220)
T cd03263 81 PQFD--ALFDELTVREHLRFYARLKGLPKSEIKEEVELLLRVLGLT-DKANKRARTLSGGMKRKLSLAIALIGGPSVLLL 157 (220)
T ss_pred cCcC--CccccCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCH-HHHhChhhhCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 6643 45567899999875421 111 23567889999995 567889999999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHhcC--ceEEEEecCHHHHHhhccEEEEEECCEEEEecCCh
Q 005532 568 DEPTNHLDIPSKEMLEEAISEYK--GTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDY 625 (692)
Q Consensus 568 DEPTn~LD~~~~~~l~~~l~~~~--~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~ 625 (692)
||||++||+.+++.+.+.|+++. .|||++|||++++..+||++++|++|++.. .|+.
T Consensus 158 DEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~-~~~~ 216 (220)
T cd03263 158 DEPTSGLDPASRRAIWDLILEVRKGRSIILTTHSMDEAEALCDRIAIMSDGKLRC-IGSP 216 (220)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhcCEEEEEECCEEEe-cCCH
Confidence 99999999999999999998763 599999999999999999999999999984 3543
No 264
>cd03262 ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively. Histidine permease is a multisubunit complex containing the HisQ and HisM integral membrane subunits and two copies of HisP. HisP has properties intermediate between those of integral and peripheral membrane proteins and is accessible from both sides of the membrane, presumably by its interaction with HisQ and HisM. The two HisP subunits form a homodimer within the complex. The domain structure of the amino acid uptake systems is typical for prokaryote extracellular solute binding protein-dependent uptake systems. All of the amino acid uptake systems also have at least one, and in a few cases, two extracellular solute binding proteins located in the periplasm of Gram-negative bacteria, or attached to the cell membrane of Gram-positive bacteria. The best-studied member of the PAAT (polar amino acid transport) family is the HisJQM
Probab=100.00 E-value=4.8e-40 Score=331.82 Aligned_cols=191 Identities=28% Similarity=0.441 Sum_probs=165.9
Q ss_pred EEEEeEEEEcCCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccce------------eee
Q 005532 425 VTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL------------PNY 492 (692)
Q Consensus 425 l~~~~l~~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~~------------~~~ 492 (692)
|+++||++.|+++.+|+++||+|++|+++||+||||||||||+++|+|+++|++|+|.++|.++. .+|
T Consensus 1 l~~~~l~~~~~~~~~l~~~s~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~ 80 (213)
T cd03262 1 IEIKNLHKSFGDFHVLKGIDLTVKKGEVVVIIGPSGSGKSTLLRCINLLEEPDSGTIIIDGLKLTDDKKNINELRQKVGM 80 (213)
T ss_pred CEEEEEEEEECCeEeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCccchhHHHHHhcceE
Confidence 47899999999888999999999999999999999999999999999999999999999986541 245
Q ss_pred ecccchhhcCCCccHHHHHHHHh---cccc----HHHHHHHHhhcCCCcccccccCCCCCHHHHHHHHHHHHhccCCcEE
Q 005532 493 FEQNQAEALDLDKTVLETVAEAA---EDWR----IDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLL 565 (692)
Q Consensus 493 ~~q~~~~~l~~~~tv~e~~~~~~---~~~~----~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~LAral~~~p~lL 565 (692)
++|. ..+.+..|+.+|+.... ..+. ...+.++++.+|+. ...++++.+|||||||||+|||||+.+|++|
T Consensus 81 ~~q~--~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LS~G~~qrv~la~al~~~p~ll 157 (213)
T cd03262 81 VFQQ--FNLFPHLTVLENITLAPIKVKGMSKAEAEERALELLEKVGLA-DKADAYPAQLSGGQQQRVAIARALAMNPKVM 157 (213)
T ss_pred Eecc--cccCCCCcHHHHHHhHHHHhcCCCHHHHHHHHHHHHHHcCCH-hHhhhCccccCHHHHHHHHHHHHHhcCCCEE
Confidence 5554 34556789999986532 1111 23467889999995 5678999999999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhccEEEEEECCEE
Q 005532 566 VLDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKGSNL 618 (692)
Q Consensus 566 lLDEPTn~LD~~~~~~l~~~l~~~---~~tviivSHd~~~l~~~~d~i~~l~~g~l 618 (692)
||||||++||+.+++++.+.|+++ +.|||++|||.+++.++||+|++|++|++
T Consensus 158 llDEP~~~LD~~~~~~l~~~l~~~~~~~~tvi~~sh~~~~~~~~~d~i~~l~~g~i 213 (213)
T cd03262 158 LFDEPTSALDPELVGEVLDVMKDLAEEGMTMVVVTHEMGFAREVADRVIFMDDGRI 213 (213)
T ss_pred EEeCCccCCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 999999999999999999999865 45999999999999999999999998864
No 265
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=1e-39 Score=334.73 Aligned_cols=201 Identities=27% Similarity=0.401 Sum_probs=172.1
Q ss_pred eEEEEeEEEEcCCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccce---------eeeec
Q 005532 424 VVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL---------PNYFE 494 (692)
Q Consensus 424 ~l~~~~l~~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~~---------~~~~~ 494 (692)
+|+++|++++|+++.+|+++||+|.+|+++||+||||||||||+++|+|+++|++|+|.++|.++. .+|++
T Consensus 1 ~l~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~i~~~~~~~~~~i~~~~ 80 (236)
T TIGR03864 1 ALEVAGLSFAYGARRALDDVSFTVRPGEFVALLGPNGAGKSTLFSLLTRLYVAQEGQISVAGHDLRRAPRAALARLGVVF 80 (236)
T ss_pred CEEEEeeEEEECCEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcccCChhhhhhEEEeC
Confidence 478999999999889999999999999999999999999999999999999999999999886542 34666
Q ss_pred ccchhhcCCCccHHHHHHHHhcc--c----cHHHHHHHHhhcCCCcccccccCCCCCHHHHHHHHHHHHhccCCcEEEEe
Q 005532 495 QNQAEALDLDKTVLETVAEAAED--W----RIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLD 568 (692)
Q Consensus 495 q~~~~~l~~~~tv~e~~~~~~~~--~----~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~LAral~~~p~lLlLD 568 (692)
|+. .+.+..|+.+|+...... . ....+.++++.+|+. ...++++.+|||||||||+|||||+.+|+|||||
T Consensus 81 q~~--~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~-~~~~~~~~~LS~G~~qrl~laral~~~p~llllD 157 (236)
T TIGR03864 81 QQP--TLDLDLSVRQNLRYHAALHGLSRAEARERIAALLARLGLA-ERADDKVRELNGGHRRRVEIARALLHRPALLLLD 157 (236)
T ss_pred CCC--CCcccCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCh-hhhcCChhhCCHHHHHHHHHHHHHhcCCCEEEEc
Confidence 643 455678999998654221 1 123567889999995 5678999999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEECCEEEEecCChhHHH
Q 005532 569 EPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYYL 629 (692)
Q Consensus 569 EPTn~LD~~~~~~l~~~l~~~----~~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~~~~ 629 (692)
|||++||+.+++.+.+.|.++ +.|||+||||++++.. ||++++|++|++.. .|..+++.
T Consensus 158 EP~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~-~d~i~~l~~G~i~~-~~~~~~~~ 220 (236)
T TIGR03864 158 EPTVGLDPASRAAIVAHVRALCRDQGLSVLWATHLVDEIEA-DDRLVVLHRGRVLA-DGAAAELR 220 (236)
T ss_pred CCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecChhhHhh-CCEEEEEeCCeEEE-eCCHHHHH
Confidence 999999999999999998764 4599999999999975 99999999999974 46655543
No 266
>cd03297 ABC_ModC_molybdenum_transporter ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.1e-40 Score=331.43 Aligned_cols=189 Identities=31% Similarity=0.458 Sum_probs=161.8
Q ss_pred eEEEEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC--------------ceEEEEc
Q 005532 102 NISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN--------------MKIAFLS 167 (692)
Q Consensus 102 ~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~--------------~~i~~v~ 167 (692)
|++|+|++..+ |+||+|++ ++++|+||||||||||+++|+|+++|++|+|.++|.. ..++|++
T Consensus 5 ~l~~~~~~~~~--~vsl~i~~-e~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~ 81 (214)
T cd03297 5 DIEKRLPDFTL--KIDFDLNE-EVTGIFGASGAGKSTLLRCIAGLEKPDGGTIVLNGTVLFDSRKKINLPPQQRKIGLVF 81 (214)
T ss_pred eeeEecCCeee--CceEEEcc-eeEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEecccccchhhhhhHhhcEEEEe
Confidence 89999998766 99999999 9999999999999999999999999999999998632 2599999
Q ss_pred ccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHHhhhcC
Q 005532 168 QEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELG 247 (692)
Q Consensus 168 Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lg 247 (692)
|++.+++..|+.+|+...... ......+.++.++++.+|
T Consensus 82 q~~~~~~~~t~~~~l~~~~~~-----------------------------------------~~~~~~~~~~~~~l~~~~ 120 (214)
T cd03297 82 QQYALFPHLNVRENLAFGLKR-----------------------------------------KRNREDRISVDELLDLLG 120 (214)
T ss_pred cCCccCCCCCHHHHHHHHHhh-----------------------------------------CCHHHHHHHHHHHHHHcC
Confidence 999887788999998522100 000011234567788888
Q ss_pred CCccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc----CCCeEEEEecCHHHHHhhc
Q 005532 248 FTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVIISHDRAFLDQLC 323 (692)
Q Consensus 248 l~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~----~~~tvI~vsHd~~~l~~~~ 323 (692)
+. ...++++.+||||||||++|||||+.+|++|||||||++||+.+++++.++|++ .+.|||++|||++++..+|
T Consensus 121 l~-~~~~~~~~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~ 199 (214)
T cd03297 121 LD-HLLNRYPAQLSGGEKQRVALARALAAQPELLLLDEPFSALDRALRLQLLPELKQIKKNLNIPVIFVTHDLSEAEYLA 199 (214)
T ss_pred CH-hHhhcCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEecCHHHHHHhc
Confidence 86 467888999999999999999999999999999999999999999999887743 3889999999999999999
Q ss_pred CeEEEEecceEE
Q 005532 324 TKIVETEMGVSR 335 (692)
Q Consensus 324 d~i~~l~~G~~~ 335 (692)
|+++++++|++.
T Consensus 200 d~i~~l~~G~i~ 211 (214)
T cd03297 200 DRIVVMEDGRLQ 211 (214)
T ss_pred CEEEEEECCEEE
Confidence 999999999873
No 267
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=100.00 E-value=1.1e-39 Score=349.46 Aligned_cols=209 Identities=23% Similarity=0.408 Sum_probs=178.4
Q ss_pred CCceEEEEeEEEEcCC-------------eecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCcc
Q 005532 421 GRSVVTIKNLEFGYED-------------RLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHN 487 (692)
Q Consensus 421 ~~~~l~~~~l~~~y~~-------------~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~ 487 (692)
.+++|+++||++.|+. ..+++|+||+|.+||++||+|+||||||||+++|+|+++|++|+|.++|.+
T Consensus 5 ~~~~l~v~~l~~~~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTLlk~i~Gl~~p~~G~I~~~G~~ 84 (331)
T PRK15079 5 KKVLLEVADLKVHFDIKDGKQWFWQPPKTLKAVDGVTLRLYEGETLGVVGESGCGKSTFARAIIGLVKATDGEVAWLGKD 84 (331)
T ss_pred CCceEEEeCeEEEECCCCccccccccCCceEEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCCcEEEECCEE
Confidence 3468999999999962 468999999999999999999999999999999999999999999999876
Q ss_pred ce-------------eeeecccchhhcCCCccHHHHHHHHhc----ccc----HHHHHHHHhhcCCCcccccccCCCCCH
Q 005532 488 VL-------------PNYFEQNQAEALDLDKTVLETVAEAAE----DWR----IDDIKGLLGRCNFKADMLDRKVSLLSG 546 (692)
Q Consensus 488 ~~-------------~~~~~q~~~~~l~~~~tv~e~~~~~~~----~~~----~~~~~~~L~~~~l~~~~~~~~~~~LSg 546 (692)
+. .+|++|+....+++..|+.+++..... ... ...+.++|+.+++.....++++.+|||
T Consensus 85 i~~~~~~~~~~~r~~i~~v~Q~~~~~l~p~~tv~~~i~~~l~~~~~~~~~~~~~~~~~~~l~~vgl~~~~~~~~p~~LSg 164 (331)
T PRK15079 85 LLGMKDDEWRAVRSDIQMIFQDPLASLNPRMTIGEIIAEPLRTYHPKLSRQEVKDRVKAMMLKVGLLPNLINRYPHEFSG 164 (331)
T ss_pred CCcCCHHHHHHHhCceEEEecCchhhcCCCCCHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCCChHHhcCCcccCCH
Confidence 42 457777654457788999999875321 111 234678899999965567999999999
Q ss_pred HHHHHHHHHHHhccCCcEEEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEECCEEEEec
Q 005532 547 GEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYA 622 (692)
Q Consensus 547 Gqkqrv~LAral~~~p~lLlLDEPTn~LD~~~~~~l~~~l~~~----~~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~ 622 (692)
||+|||+|||||+.+|+||||||||++||+.++..+.++|+++ +.|||+||||+.++..+||+|++|++|++++.
T Consensus 165 G~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~~~til~iTHdl~~~~~~~dri~vl~~G~ive~- 243 (331)
T PRK15079 165 GQCQRIGIARALILEPKLIICDEPVSALDVSIQAQVVNLLQQLQREMGLSLIFIAHDLAVVKHISDRVLVMYLGHAVEL- 243 (331)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEE-
Confidence 9999999999999999999999999999999999999988754 56999999999999999999999999999864
Q ss_pred CChhHHHH
Q 005532 623 GDYNYYLE 630 (692)
Q Consensus 623 g~~~~~~~ 630 (692)
|..+++..
T Consensus 244 g~~~~i~~ 251 (331)
T PRK15079 244 GTYDEVYH 251 (331)
T ss_pred cCHHHHHc
Confidence 66555543
No 268
>PRK14272 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-39 Score=337.81 Aligned_cols=208 Identities=20% Similarity=0.309 Sum_probs=166.7
Q ss_pred cEEEEeEEEEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCC-----ccEEEECCCC-----------
Q 005532 97 GVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPD-----SGNVIKAKSN----------- 160 (692)
Q Consensus 97 ~l~i~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~-----~G~I~~~~~~----------- 160 (692)
+|+++|++++|+++++|+|+||+|++|++++|+|+||||||||+++|+|+++|+ +|+|.++|.+
T Consensus 4 ~l~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~ 83 (252)
T PRK14272 4 LLSAQDVNIYYGDKQAVKNVNLDVQRGTVNALIGPSGCGKTTFLRAINRMHDLTPGARVTGRILLDGQDIYGPRVDPVAM 83 (252)
T ss_pred EEEEeeeEEEECCEEeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceeEEECCEEcccCccCHHHh
Confidence 489999999999889999999999999999999999999999999999999874 8999998732
Q ss_pred -ceEEEEcccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHH
Q 005532 161 -MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKV 239 (692)
Q Consensus 161 -~~i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 239 (692)
..|+|++|++.+++..|+.+|+...+... ... ......+.+
T Consensus 84 ~~~i~~~~q~~~~~~~~t~~enl~~~~~~~---------------~~~-----------------------~~~~~~~~~ 125 (252)
T PRK14272 84 RRRVGMVFQKPNPFPTMSVFDNVVAGLKLA---------------GIR-----------------------DRDHLMEVA 125 (252)
T ss_pred hceeEEEeccCccCcCCCHHHHHHHHHHhc---------------CCC-----------------------CHHHHHHHH
Confidence 25999999998877789999985322100 000 000011222
Q ss_pred HHHhhhcCCC---ccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc--CCCeEEEEec
Q 005532 240 SKLMPELGFT---ADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVIISH 314 (692)
Q Consensus 240 ~~ll~~lgl~---~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~--~~~tvI~vsH 314 (692)
.+++..+++. ....++++.+|||||+||++|||||+.+|+||||||||++||+.+++++.++|++ .++|||++||
T Consensus 126 ~~~l~~~~l~~~l~~~~~~~~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH 205 (252)
T PRK14272 126 ERSLRGAALWDEVKDRLKTPATGLSGGQQQRLCIARALAVEPEILLMDEPTSALDPASTARIEDLMTDLKKVTTIIIVTH 205 (252)
T ss_pred HHHHHHcCcchhhhhhhcCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeC
Confidence 2333333331 1245778999999999999999999999999999999999999999999888754 3689999999
Q ss_pred CHHHHHhhcCeEEEEecceEEEeccChHH
Q 005532 315 DRAFLDQLCTKIVETEMGVSRTYEGNYSQ 343 (692)
Q Consensus 315 d~~~l~~~~d~i~~l~~G~~~~~~G~y~~ 343 (692)
+++++..+||+|++|++|++. +.|...+
T Consensus 206 ~~~~~~~~~d~i~~l~~G~i~-~~~~~~~ 233 (252)
T PRK14272 206 NMHQAARVSDTTSFFLVGDLV-EHGPTDQ 233 (252)
T ss_pred CHHHHHHhCCEEEEEECCEEE-EeCCHHH
Confidence 999999999999999999974 5566544
No 269
>TIGR01277 thiQ thiamine ABC transporter, ATP-binding protein. This model describes the energy-transducing ATPase subunit ThiQ of the ThiBPQ thiamine (and thiamine pyrophosphate) ABC transporter in several Proteobacteria. This protein is found so far only in Proteobacteria, and is found in complete genomes only if the ThiB and ThiP subunits are also found.
Probab=100.00 E-value=6.7e-40 Score=330.93 Aligned_cols=196 Identities=26% Similarity=0.371 Sum_probs=166.0
Q ss_pred EEEEeEEEEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC--------ceEEEEccc
Q 005532 98 VKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN--------MKIAFLSQE 169 (692)
Q Consensus 98 l~i~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~--------~~i~~v~Q~ 169 (692)
++++|+++.|+. ++.|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.+ ..++|++|+
T Consensus 1 ~~~~~l~~~~~~--~~~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~i~~v~q~ 78 (213)
T TIGR01277 1 LALDKVRYEYEH--LPMEFDLNVADGEIVAIMGPSGAGKSTLLNLIAGFIEPASGSIKVNDQSHTGLAPYQRPVSMLFQE 78 (213)
T ss_pred CeEEeeeEEeCC--cceeeEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEEcccCChhccceEEEecc
Confidence 468999999974 5789999999999999999999999999999999999999999998743 259999999
Q ss_pred CccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHHhhhcCCC
Q 005532 170 FEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFT 249 (692)
Q Consensus 170 ~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl~ 249 (692)
+.+++..|+.+|+...+.... ......+.++.++++.+|+.
T Consensus 79 ~~~~~~~t~~en~~~~~~~~~---------------------------------------~~~~~~~~~~~~~l~~~~l~ 119 (213)
T TIGR01277 79 NNLFAHLTVRQNIGLGLHPGL---------------------------------------KLNAEQQEKVVDAAQQVGIA 119 (213)
T ss_pred CccCCCCcHHHHHHhHhhccC---------------------------------------CccHHHHHHHHHHHHHcCcH
Confidence 988778899999853211000 00001134556778888986
Q ss_pred ccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc----CCCeEEEEecCHHHHHhhcCe
Q 005532 250 ADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVIISHDRAFLDQLCTK 325 (692)
Q Consensus 250 ~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~----~~~tvI~vsHd~~~l~~~~d~ 325 (692)
+..++++.+|||||+||++|||||+.+|+||||||||++||+.+++.+.++|++ .+.|||+|||+++++..+||+
T Consensus 120 -~~~~~~~~~LS~G~~qrl~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~tii~vsh~~~~~~~~~d~ 198 (213)
T TIGR01277 120 -DYLDRLPEQLSGGQRQRVALARCLVRPNPILLLDEPFSALDPLLREEMLALVKQLCSERQRTLLMVTHHLSDARAIASQ 198 (213)
T ss_pred -HHhhCCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCe
Confidence 567888999999999999999999999999999999999999999998887643 478999999999999999999
Q ss_pred EEEEecceEE
Q 005532 326 IVETEMGVSR 335 (692)
Q Consensus 326 i~~l~~G~~~ 335 (692)
++++++|++.
T Consensus 199 v~~l~~g~i~ 208 (213)
T TIGR01277 199 IAVVSQGKIK 208 (213)
T ss_pred EEEEECCeEE
Confidence 9999999874
No 270
>PRK14237 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-39 Score=340.15 Aligned_cols=210 Identities=19% Similarity=0.274 Sum_probs=171.3
Q ss_pred CCcEEEEeEEEEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCC-----CCccEEEECCCC---------
Q 005532 95 SSGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEE-----PDSGNVIKAKSN--------- 160 (692)
Q Consensus 95 ~~~l~i~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~-----p~~G~I~~~~~~--------- 160 (692)
...|+++|++++|+++++|+|+||+|.+||+++|+|+||||||||+++|+|+++ |++|+|.++|.+
T Consensus 18 ~~~l~~~nl~~~~~~~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~ 97 (267)
T PRK14237 18 EIALSTKDLHVYYGKKEAIKGIDMQFEKNKITALIGPSGSGKSTYLRSLNRMNDTIDIARVTGQILYRGIDINRKEINVY 97 (267)
T ss_pred CeEEEEeeEEEEECCeeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhccCccCCCCcceEEEECCEEcccccCChH
Confidence 346999999999998899999999999999999999999999999999999996 589999988732
Q ss_pred ---ceEEEEcccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHH
Q 005532 161 ---MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDA 237 (692)
Q Consensus 161 ---~~i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (692)
..|+|++|++.+++ .||.+|+...+... . .......+.
T Consensus 98 ~~~~~i~~v~q~~~~~~-~tv~eni~~~~~~~---------------~-----------------------~~~~~~~~~ 138 (267)
T PRK14237 98 EMRKHIGMVFQRPNPFA-KSIYENITFALERA---------------G-----------------------VKDKKVLDE 138 (267)
T ss_pred HHhcceEEEecCCcccc-ccHHHHHHhHHHhc---------------C-----------------------CCCHHHHHH
Confidence 25999999987765 69999985321100 0 000111233
Q ss_pred HHHHHhhhcCCCc---cccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc--CCCeEEEE
Q 005532 238 KVSKLMPELGFTA---DDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVII 312 (692)
Q Consensus 238 ~i~~ll~~lgl~~---~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~--~~~tvI~v 312 (692)
++.++++.+|+.. ...++++.+|||||+||++|||||+.+|++|||||||++||+.++.++.++|++ .+.|||+|
T Consensus 139 ~~~~~l~~~~l~~~i~~~~~~~~~~LS~G~~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~ 218 (267)
T PRK14237 139 IVETSLKQAALWDQVKDDLHKSALTLSGGQQQRLCIARAIAVKPDILLMDEPASALDPISTMQLEETMFELKKNYTIIIV 218 (267)
T ss_pred HHHHHHHHcCCCchhhhhhcCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEE
Confidence 4556677777632 345788999999999999999999999999999999999999999999887753 36899999
Q ss_pred ecCHHHHHhhcCeEEEEecceEEEeccChHHH
Q 005532 313 SHDRAFLDQLCTKIVETEMGVSRTYEGNYSQY 344 (692)
Q Consensus 313 sHd~~~l~~~~d~i~~l~~G~~~~~~G~y~~~ 344 (692)
||+++++..+||+|+++++|++. ..|...++
T Consensus 219 tH~~~~~~~~~d~i~~l~~G~i~-~~g~~~~~ 249 (267)
T PRK14237 219 THNMQQAARASDYTAFFYLGDLI-EYDKTRNI 249 (267)
T ss_pred ecCHHHHHHhcCEEEEEECCEEE-EeCCHHHH
Confidence 99999999999999999999984 55665443
No 271
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6e-40 Score=343.33 Aligned_cols=206 Identities=25% Similarity=0.393 Sum_probs=171.2
Q ss_pred CcEEEEeEEEEeC--CeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC----------ceE
Q 005532 96 SGVKLENISKSYK--GVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN----------MKI 163 (692)
Q Consensus 96 ~~l~i~~ls~~y~--~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~----------~~i 163 (692)
.+|+++|++++|+ ++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.+ ..|
T Consensus 6 ~~l~~~nl~~~~~~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~i 85 (271)
T PRK13632 6 VMIKVENVSFSYPNSENNALKNVSFEINEGEYVAILGHNGSGKSTISKILTGLLKPQSGEIKIDGITISKENLKEIRKKI 85 (271)
T ss_pred eEEEEEeEEEEcCCCCccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEecCcCCHHHHhcce
Confidence 4699999999995 4579999999999999999999999999999999999999999999998743 249
Q ss_pred EEEcccCc-cCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHH
Q 005532 164 AFLSQEFE-VSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKL 242 (692)
Q Consensus 164 ~~v~Q~~~-~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l 242 (692)
+|++|++. .++..||.+|+...... . ..+......++.++
T Consensus 86 ~~v~q~~~~~~~~~tv~enl~~~~~~---------------~------------------------~~~~~~~~~~~~~~ 126 (271)
T PRK13632 86 GIIFQNPDNQFIGATVEDDIAFGLEN---------------K------------------------KVPPKKMKDIIDDL 126 (271)
T ss_pred EEEEeCHHHhcCcccHHHHHHhHHHH---------------c------------------------CCCHHHHHHHHHHH
Confidence 99999974 45678999998532100 0 00111223456678
Q ss_pred hhhcCCCccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc---C-CCeEEEEecCHHH
Q 005532 243 MPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK---Q-DVPMVIISHDRAF 318 (692)
Q Consensus 243 l~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~---~-~~tvI~vsHd~~~ 318 (692)
++.+|+. ...++.+.+|||||+||++|||||+.+|+||||||||+|||+.+++.+.++|++ . +.|||++||++++
T Consensus 127 l~~~~l~-~~~~~~~~~LS~G~~qrl~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~ 205 (271)
T PRK13632 127 AKKVGME-DYLDKEPQNLSGGQKQRVAIASVLALNPEIIIFDESTSMLDPKGKREIKKIMVDLRKTRKKTLISITHDMDE 205 (271)
T ss_pred HHHcCCH-HHhhCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEEechhH
Confidence 8888986 567889999999999999999999999999999999999999999999888753 3 4899999999999
Q ss_pred HHhhcCeEEEEecceEEEeccChHH
Q 005532 319 LDQLCTKIVETEMGVSRTYEGNYSQ 343 (692)
Q Consensus 319 l~~~~d~i~~l~~G~~~~~~G~y~~ 343 (692)
+. .||+|+++++|++. ..|...+
T Consensus 206 ~~-~~d~v~~l~~G~i~-~~g~~~~ 228 (271)
T PRK13632 206 AI-LADKVIVFSEGKLI-AQGKPKE 228 (271)
T ss_pred Hh-hCCEEEEEECCEEE-EecCHHH
Confidence 96 79999999999984 4565443
No 272
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=100.00 E-value=6.1e-40 Score=331.28 Aligned_cols=191 Identities=29% Similarity=0.391 Sum_probs=165.1
Q ss_pred EEEEeEEEEcCC-eecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccce-------------e
Q 005532 425 VTIKNLEFGYED-RLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL-------------P 490 (692)
Q Consensus 425 l~~~~l~~~y~~-~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~~-------------~ 490 (692)
|+++|+++.|++ +.+|+++||+|++|+++||+||||||||||+++|+|+++|++|+|.++|.++. .
T Consensus 1 l~~~~l~~~~~~~~~~l~~~sl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~i 80 (214)
T cd03292 1 IEFINVTKTYPNGTAALDGINISISAGEFVFLVGPSGAGKSTLLKLIYKEELPTSGTIRVNGQDVSDLRGRAIPYLRRKI 80 (214)
T ss_pred CEEEEEEEEeCCCceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcccCCHHHHHHHHHhe
Confidence 478999999974 68999999999999999999999999999999999999999999999886542 3
Q ss_pred eeecccchhhcCCCccHHHHHHHHhcc--c----cHHHHHHHHhhcCCCcccccccCCCCCHHHHHHHHHHHHhccCCcE
Q 005532 491 NYFEQNQAEALDLDKTVLETVAEAAED--W----RIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTL 564 (692)
Q Consensus 491 ~~~~q~~~~~l~~~~tv~e~~~~~~~~--~----~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~LAral~~~p~l 564 (692)
+|++|+ ..+.+..|+.+|+...... . ....+.++++.+++. ...++++.+||||||||++|||||+.+|+|
T Consensus 81 ~~v~q~--~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LS~G~~qrv~laral~~~p~l 157 (214)
T cd03292 81 GVVFQD--FRLLPDRNVYENVAFALEVTGVPPREIRKRVPAALELVGLS-HKHRALPAELSGGEQQRVAIARAIVNSPTI 157 (214)
T ss_pred EEEecC--chhccCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCH-HHhhCChhhcCHHHHHHHHHHHHHHcCCCE
Confidence 455554 3466678999998764321 1 123567889999995 567889999999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhccEEEEEECCEE
Q 005532 565 LVLDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKGSNL 618 (692)
Q Consensus 565 LlLDEPTn~LD~~~~~~l~~~l~~~---~~tviivSHd~~~l~~~~d~i~~l~~g~l 618 (692)
|||||||++||+.+++.+.+.|+++ +.|||+||||.+++..+||++++|++|++
T Consensus 158 lllDEPt~~LD~~~~~~~~~~l~~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~~ 214 (214)
T cd03292 158 LIADEPTGNLDPDTTWEIMNLLKKINKAGTTVVVATHAKELVDTTRHRVIALERGKL 214 (214)
T ss_pred EEEeCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 9999999999999999999999875 46999999999999999999999999864
No 273
>PRK09544 znuC high-affinity zinc transporter ATPase; Reviewed
Probab=100.00 E-value=7.6e-40 Score=338.42 Aligned_cols=198 Identities=27% Similarity=0.385 Sum_probs=165.3
Q ss_pred CcEEEEeEEEEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCCceEEEEcccCccCCC
Q 005532 96 SGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSNMKIAFLSQEFEVSMS 175 (692)
Q Consensus 96 ~~l~i~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~~~i~~v~Q~~~~~~~ 175 (692)
++|+++|++++|+++++|+++||+|++|++++|+||||||||||+++|+|+++|++|+|.+++ ...++|++|++.++..
T Consensus 3 ~~l~~~~l~~~~~~~~vl~~vs~~i~~Ge~~~I~G~NGsGKSTLl~~i~Gl~~p~~G~i~~~~-~~~i~~v~q~~~~~~~ 81 (251)
T PRK09544 3 SLVSLENVSVSFGQRRVLSDVSLELKPGKILTLLGPNGAGKSTLVRVVLGLVAPDEGVIKRNG-KLRIGYVPQKLYLDTT 81 (251)
T ss_pred cEEEEeceEEEECCceEEEeEEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECC-ccCEEEeccccccccc
Confidence 369999999999988899999999999999999999999999999999999999999999985 3479999999866544
Q ss_pred --CCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHHhhhcCCCcccc
Q 005532 176 --RTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFTADDG 253 (692)
Q Consensus 176 --~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl~~~~~ 253 (692)
.|+.+++... ......++.++++.+|+. +..
T Consensus 82 l~~~~~~~~~~~----------------------------------------------~~~~~~~~~~~l~~~gl~-~~~ 114 (251)
T PRK09544 82 LPLTVNRFLRLR----------------------------------------------PGTKKEDILPALKRVQAG-HLI 114 (251)
T ss_pred cChhHHHHHhcc----------------------------------------------ccccHHHHHHHHHHcCCh-HHH
Confidence 2555543210 000012345677778886 466
Q ss_pred ccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc----CCCeEEEEecCHHHHHhhcCeEEEE
Q 005532 254 DRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVIISHDRAFLDQLCTKIVET 329 (692)
Q Consensus 254 ~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~----~~~tvI~vsHd~~~l~~~~d~i~~l 329 (692)
++++.+|||||+|||+|||||+.+|++|||||||++||+.++.++.+.|++ .+.|||+||||++++..+||+|+++
T Consensus 115 ~~~~~~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~g~tiiivsH~~~~i~~~~d~i~~l 194 (251)
T PRK09544 115 DAPMQKLSGGETQRVLLARALLNRPQLLVLDEPTQGVDVNGQVALYDLIDQLRRELDCAVLMVSHDLHLVMAKTDEVLCL 194 (251)
T ss_pred hCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEE
Confidence 888999999999999999999999999999999999999999999887743 3899999999999999999999999
Q ss_pred ecceEEEeccChHH
Q 005532 330 EMGVSRTYEGNYSQ 343 (692)
Q Consensus 330 ~~G~~~~~~G~y~~ 343 (692)
++ ++ ...|...+
T Consensus 195 ~~-~i-~~~g~~~~ 206 (251)
T PRK09544 195 NH-HI-CCSGTPEV 206 (251)
T ss_pred CC-ce-EeeCCHHH
Confidence 65 54 45566543
No 274
>PRK14271 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-39 Score=341.11 Aligned_cols=209 Identities=23% Similarity=0.332 Sum_probs=170.5
Q ss_pred CCcEEEEeEEEEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCC-----CccEEEECCCC---------
Q 005532 95 SSGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEP-----DSGNVIKAKSN--------- 160 (692)
Q Consensus 95 ~~~l~i~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p-----~~G~I~~~~~~--------- 160 (692)
.+.|+++|++++|+++++|+|+||+|++|++++|+|+||||||||+++|+|+++| ++|+|.++|.+
T Consensus 19 ~~~l~i~nl~~~~~~~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~~ 98 (276)
T PRK14271 19 APAMAAVNLTLGFAGKTVLDQVSMGFPARAVTSLMGPTGSGKTTFLRTLNRMNDKVSGYRYSGDVLLGGRSIFNYRDVLE 98 (276)
T ss_pred CcEEEEeeEEEEECCEEEeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcCCCCCCceEEEECCEEccccchhHH
Confidence 4579999999999988999999999999999999999999999999999999985 79999998632
Q ss_pred --ceEEEEcccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHH
Q 005532 161 --MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAK 238 (692)
Q Consensus 161 --~~i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (692)
..|+|++|++.+++ .|+++|+...+... . ..........
T Consensus 99 ~~~~i~~v~q~~~l~~-~tv~eni~~~~~~~---------------~-----------------------~~~~~~~~~~ 139 (276)
T PRK14271 99 FRRRVGMLFQRPNPFP-MSIMDNVLAGVRAH---------------K-----------------------LVPRKEFRGV 139 (276)
T ss_pred HhhheEEeccCCccCC-ccHHHHHHHHHHhc---------------c-----------------------CCCHHHHHHH
Confidence 25999999988765 89999985321000 0 0001112233
Q ss_pred HHHHhhhcCCCc---cccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc--CCCeEEEEe
Q 005532 239 VSKLMPELGFTA---DDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVIIS 313 (692)
Q Consensus 239 i~~ll~~lgl~~---~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~--~~~tvI~vs 313 (692)
+.++++.+|+.. ...++.+.+|||||+|||+|||||+.+|+||||||||++||+.++++|.++|++ .+.|||+||
T Consensus 140 ~~~~l~~~~l~~~~~~~l~~~~~~LSgGq~qrl~LAral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiiivs 219 (276)
T PRK14271 140 AQARLTEVGLWDAVKDRLSDSPFRLSGGQQQLLCLARTLAVNPEVLLLDEPTSALDPTTTEKIEEFIRSLADRLTVIIVT 219 (276)
T ss_pred HHHHHHHcCCCchhhhHhhCCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhcCCEEEEEe
Confidence 455667777742 234677899999999999999999999999999999999999999999888754 258999999
Q ss_pred cCHHHHHhhcCeEEEEecceEEEeccChHH
Q 005532 314 HDRAFLDQLCTKIVETEMGVSRTYEGNYSQ 343 (692)
Q Consensus 314 Hd~~~l~~~~d~i~~l~~G~~~~~~G~y~~ 343 (692)
|+++++..+||+++++++|++. ..|...+
T Consensus 220 H~~~~~~~~~dri~~l~~G~i~-~~g~~~~ 248 (276)
T PRK14271 220 HNLAQAARISDRAALFFDGRLV-EEGPTEQ 248 (276)
T ss_pred CCHHHHHHhCCEEEEEECCEEE-EeCCHHH
Confidence 9999999999999999999974 4565443
No 275
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.7e-40 Score=319.71 Aligned_cols=204 Identities=26% Similarity=0.397 Sum_probs=170.1
Q ss_pred CceEEEEeEEEEcCCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCe-----eEEEECCccce-------
Q 005532 422 RSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRG-----GEVLLGEHNVL------- 489 (692)
Q Consensus 422 ~~~l~~~~l~~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~-----G~i~~~~~~~~------- 489 (692)
.+.++++||++.||++.+|++||+.|+++.++||+||+|||||||||+|.++.+... |+|.++|.++.
T Consensus 5 ~~~~~~~~l~~yYg~~~aL~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~g~ni~~~~~d~~ 84 (253)
T COG1117 5 IPAIEVRDLNLYYGDKHALKDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLDGKNIYDPKVDVV 84 (253)
T ss_pred cceeEecceeEEECchhhhccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEECCeeccCCCCCHH
Confidence 346899999999999999999999999999999999999999999999999987765 99999998762
Q ss_pred -----eeeecccchhhcCCCccHHHHHHHHhcccc-----H-HHHHHHHhhcCCC---cccccccCCCCCHHHHHHHHHH
Q 005532 490 -----PNYFEQNQAEALDLDKTVLETVAEAAEDWR-----I-DDIKGLLGRCNFK---ADMLDRKVSLLSGGEKARLAFC 555 (692)
Q Consensus 490 -----~~~~~q~~~~~l~~~~tv~e~~~~~~~~~~-----~-~~~~~~L~~~~l~---~~~~~~~~~~LSgGqkqrv~LA 555 (692)
.+.++|.+ +.+ .+|++||+........ . +.++..|....|= .+.+++....||||||||+|||
T Consensus 85 ~lRr~vGMVFQkP--nPF-p~SIydNVayG~r~~g~~~~~ldeiVe~sLk~AaLWdEVKDrL~~sa~~LSGGQQQRLcIA 161 (253)
T COG1117 85 ELRRRVGMVFQKP--NPF-PMSIYDNVAYGLRLHGIKDKELDEIVESSLKKAALWDEVKDRLHKSALGLSGGQQQRLCIA 161 (253)
T ss_pred HHHHHheeeccCC--CCC-CchHHHHHHHhHHhhccchHHHHHHHHHHHHHhHhHHHhHHHhhCCccCCChhHHHHHHHH
Confidence 34566654 333 4999999987643211 1 1244455554441 2456788889999999999999
Q ss_pred HHhccCCcEEEEeCCCCCCCHHHHHHHHHHHHhcCc--eEEEEecCHHHHHhhccEEEEEECCEEEEecCChhHHH
Q 005532 556 KFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEYKG--TVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYYL 629 (692)
Q Consensus 556 ral~~~p~lLlLDEPTn~LD~~~~~~l~~~l~~~~~--tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~~~~ 629 (692)
|||+.+|+|||||||||+|||.+...++++|.+++. |||+|||.+.-+.+++|++.++..|.+++|.. -+...
T Consensus 162 RalAv~PeVlLmDEPtSALDPIsT~kIEeLi~eLk~~yTIviVTHnmqQAaRvSD~taFf~~G~LvE~g~-T~~iF 236 (253)
T COG1117 162 RALAVKPEVLLMDEPTSALDPISTLKIEELITELKKKYTIVIVTHNMQQAARVSDYTAFFYLGELVEFGP-TDKIF 236 (253)
T ss_pred HHHhcCCcEEEecCcccccCchhHHHHHHHHHHHHhccEEEEEeCCHHHHHHHhHhhhhhcccEEEEEcC-HHhhh
Confidence 999999999999999999999999999999998754 99999999999999999999999999999844 44443
No 276
>PRK14254 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.9e-39 Score=341.68 Aligned_cols=209 Identities=19% Similarity=0.299 Sum_probs=170.3
Q ss_pred CCCCcEEEEeEEEEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCC-----CCccEEEECCCC-------
Q 005532 93 SISSGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEE-----PDSGNVIKAKSN------- 160 (692)
Q Consensus 93 ~~~~~l~i~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~-----p~~G~I~~~~~~------- 160 (692)
...++|+++|++++|+++++|+|+||+|++|++++|+|+||||||||+++|+|+++ |++|+|.++|..
T Consensus 35 ~~~~~l~i~~l~~~~~~~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~I~i~G~~i~~~~~~ 114 (285)
T PRK14254 35 SGETVIEARDLNVFYGDEQALDDVSMDIPENQVTAMIGPSGCGKSTFLRCINRMNDLIDAARVEGELTFRGKNVYDADVD 114 (285)
T ss_pred CCCceEEEEEEEEEECCEeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccc
Confidence 34567999999999998889999999999999999999999999999999999987 689999997632
Q ss_pred -----ceEEEEcccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccH
Q 005532 161 -----MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTL 235 (692)
Q Consensus 161 -----~~i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (692)
..++|++|++.+++ .|+.+|+...... .. .. ...
T Consensus 115 ~~~~~~~i~~v~q~~~l~~-~tv~enl~~~~~~---------------~~------------------------~~-~~~ 153 (285)
T PRK14254 115 PVALRRRIGMVFQKPNPFP-KSIYDNVAYGLKI---------------QG------------------------YD-GDI 153 (285)
T ss_pred hHhhhccEEEEecCCccCc-CCHHHHHHHHHHH---------------cC------------------------Cc-HHH
Confidence 25999999987765 4999998532100 00 00 012
Q ss_pred HHHHHHHhhhcCCCc---cccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHccC--CCeEE
Q 005532 236 DAKVSKLMPELGFTA---DDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGKQ--DVPMV 310 (692)
Q Consensus 236 ~~~i~~ll~~lgl~~---~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~~--~~tvI 310 (692)
..++.++++.+|+.. ...++++.+|||||||||+|||||+.+|+||||||||++||+.+++++.++|++. +.|||
T Consensus 154 ~~~~~~~l~~~~l~~~i~~~~~~~~~~LSgGe~qrv~LAraL~~~p~lLLLDEPts~LD~~~~~~l~~~L~~~~~~~tii 233 (285)
T PRK14254 154 DERVEESLRRAALWDEVKDQLDSSGLDLSGGQQQRLCIARAIAPDPEVILMDEPASALDPVATSKIEDLIEELAEEYTVV 233 (285)
T ss_pred HHHHHHHHHHcCCCchhHHHHhCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhcCCEEE
Confidence 234556677777642 3457889999999999999999999999999999999999999999998887542 57999
Q ss_pred EEecCHHHHHhhcCeEE-EEecceEEEeccChHH
Q 005532 311 IISHDRAFLDQLCTKIV-ETEMGVSRTYEGNYSQ 343 (692)
Q Consensus 311 ~vsHd~~~l~~~~d~i~-~l~~G~~~~~~G~y~~ 343 (692)
+||||++++..+||+++ ++++|++. ..|...+
T Consensus 234 i~tH~~~~i~~~~dri~v~l~~G~i~-~~g~~~~ 266 (285)
T PRK14254 234 IVTHNMQQAARISDKTAVFLTGGELV-EFDDTDK 266 (285)
T ss_pred EEeCCHHHHHhhcCEEEEEeeCCEEE-EeCCHHH
Confidence 99999999999999975 57999984 4565443
No 277
>PRK14270 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-39 Score=337.14 Aligned_cols=208 Identities=19% Similarity=0.258 Sum_probs=169.3
Q ss_pred CcEEEEeEEEEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCC-----CccEEEECCCC----------
Q 005532 96 SGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEP-----DSGNVIKAKSN---------- 160 (692)
Q Consensus 96 ~~l~i~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p-----~~G~I~~~~~~---------- 160 (692)
++|+++|++++|+++++|+|+||+|++|++++|+|+||||||||+++|+|+++| ++|+|.++|.+
T Consensus 3 ~~l~~~~l~~~~~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~ 82 (251)
T PRK14270 3 IKMESKNLNLWYGEKQALNDINLPIYENKITALIGPSGCGKSTFLRCLNRMNDLISNVKIEGEVLLDGKNIYDKDVDVVE 82 (251)
T ss_pred cEEEEEEeEEEECCeeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHHhccCcccCCCCccEEEECCEecccccccHHH
Confidence 569999999999988899999999999999999999999999999999999875 79999998632
Q ss_pred --ceEEEEcccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHH
Q 005532 161 --MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAK 238 (692)
Q Consensus 161 --~~i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (692)
..++|++|++.++. .|+.+|+...... ... ........+
T Consensus 83 ~~~~i~~~~q~~~~~~-~tv~enl~~~~~~---------------~~~-----------------------~~~~~~~~~ 123 (251)
T PRK14270 83 LRKRVGMVFQKPNPFP-MSIYDNVAYGPRI---------------HGI-----------------------KDKKELDKI 123 (251)
T ss_pred HHhheEEEecCCCcCC-CcHHHHHHhHHHh---------------cCC-----------------------CcHHHHHHH
Confidence 24999999988765 8999998522100 000 000011234
Q ss_pred HHHHhhhcCCCc---cccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc--CCCeEEEEe
Q 005532 239 VSKLMPELGFTA---DDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVIIS 313 (692)
Q Consensus 239 i~~ll~~lgl~~---~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~--~~~tvI~vs 313 (692)
+.++++.+|+.. ...++++.+|||||||||+|||||+.+|+||||||||++||+.++.++.++|++ .+.|||+||
T Consensus 124 ~~~~l~~~~l~~~~~~~~~~~~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~~~tiiivs 203 (251)
T PRK14270 124 VEWALKKAALWDEVKDDLKKSALKLSGGQQQRLCIARTIAVKPDVILMDEPTSALDPISTLKIEDLMVELKKEYTIVIVT 203 (251)
T ss_pred HHHHHHHcCCchhhhhHhhCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCeEEEEE
Confidence 455666776631 345778999999999999999999999999999999999999999999888754 268999999
Q ss_pred cCHHHHHhhcCeEEEEecceEEEeccChHH
Q 005532 314 HDRAFLDQLCTKIVETEMGVSRTYEGNYSQ 343 (692)
Q Consensus 314 Hd~~~l~~~~d~i~~l~~G~~~~~~G~y~~ 343 (692)
|+++++..+||+|+++++|++. ..|...+
T Consensus 204 H~~~~~~~~~d~v~~l~~G~i~-~~~~~~~ 232 (251)
T PRK14270 204 HNMQQASRVSDYTAFFLMGDLI-EFNKTEK 232 (251)
T ss_pred cCHHHHHHhcCEEEEEECCeEE-EeCCHHH
Confidence 9999999999999999999985 4455443
No 278
>PRK13538 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=5.4e-40 Score=329.43 Aligned_cols=190 Identities=23% Similarity=0.339 Sum_probs=163.7
Q ss_pred cEEEEeEEEEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC---------ceEEEEc
Q 005532 97 GVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN---------MKIAFLS 167 (692)
Q Consensus 97 ~l~i~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~---------~~i~~v~ 167 (692)
+|+++|++++|+++++|+|+||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|.. ..++|++
T Consensus 1 ~l~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~v~~~g~~~~~~~~~~~~~~~~~~ 80 (204)
T PRK13538 1 MLEARNLACERDERILFSGLSFTLNAGELVQIEGPNGAGKTSLLRILAGLARPDAGEVLWQGEPIRRQRDEYHQDLLYLG 80 (204)
T ss_pred CeEEEEEEEEECCEEEEecceEEECCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEcccchHHhhhheEEeC
Confidence 3789999999998889999999999999999999999999999999999999999999998743 2599999
Q ss_pred ccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHHhhhcC
Q 005532 168 QEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELG 247 (692)
Q Consensus 168 Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lg 247 (692)
|++.+++..|+.||+...... .. .....++.++++.+|
T Consensus 81 ~~~~~~~~~tv~e~l~~~~~~-----------------------------------------~~-~~~~~~~~~~l~~~g 118 (204)
T PRK13538 81 HQPGIKTELTALENLRFYQRL-----------------------------------------HG-PGDDEALWEALAQVG 118 (204)
T ss_pred CccccCcCCcHHHHHHHHHHh-----------------------------------------cC-ccHHHHHHHHHHHcC
Confidence 998887788999998521100 00 011245667888889
Q ss_pred CCccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc---CCCeEEEEecCHHHHHhhcC
Q 005532 248 FTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK---QDVPMVIISHDRAFLDQLCT 324 (692)
Q Consensus 248 l~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~---~~~tvI~vsHd~~~l~~~~d 324 (692)
+. ...++++.+||||||||++|||||+.+|++|||||||++||+.+++++.++|++ .+.|||+||||++++..+.+
T Consensus 119 l~-~~~~~~~~~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~i~~~~~ 197 (204)
T PRK13538 119 LA-GFEDVPVRQLSAGQQRRVALARLWLTRAPLWILDEPFTAIDKQGVARLEALLAQHAEQGGMVILTTHQDLPVASDKV 197 (204)
T ss_pred CH-HHhhCChhhcCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHCCCEEEEEecChhhhccCCc
Confidence 86 456888999999999999999999999999999999999999999999888754 47899999999999999888
Q ss_pred eEEEE
Q 005532 325 KIVET 329 (692)
Q Consensus 325 ~i~~l 329 (692)
+++++
T Consensus 198 ~~~~~ 202 (204)
T PRK13538 198 RKLRL 202 (204)
T ss_pred eEEec
Confidence 88776
No 279
>COG4152 ABC-type uncharacterized transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=2e-40 Score=324.62 Aligned_cols=204 Identities=25% Similarity=0.465 Sum_probs=180.9
Q ss_pred cEEEEeEEEEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC------ceEEEEcccC
Q 005532 97 GVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN------MKIAFLSQEF 170 (692)
Q Consensus 97 ~l~i~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~------~~i~~v~Q~~ 170 (692)
++++++|+++||+..+++|+||+|++|++.|++|+||+||||.+++|+|+++|++|+|.++|.. .+|||+|.+-
T Consensus 2 ~L~ie~vtK~Fg~k~av~~isf~v~~G~i~GllG~NGAGKTTtfRmILglle~~~G~I~~~g~~~~~~~~~rIGyLPEER 81 (300)
T COG4152 2 ALEIEGVTKSFGDKKAVDNISFEVPPGEIFGLLGPNGAGKTTTFRMILGLLEPTEGEITWNGGPLSQEIKNRIGYLPEER 81 (300)
T ss_pred ceEEecchhccCceeeecceeeeecCCeEEEeecCCCCCccchHHHHhccCCccCceEEEcCcchhhhhhhhcccChhhh
Confidence 5899999999999999999999999999999999999999999999999999999999999854 3799999999
Q ss_pred ccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHHhhhcCCCc
Q 005532 171 EVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFTA 250 (692)
Q Consensus 171 ~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl~~ 250 (692)
.+++.+||.|.+... . . ...++..+...++..+|+.+++.
T Consensus 82 GLy~k~tv~dql~yl-a--------------~------------------------LkGm~~~e~~~~~~~wLer~~i~- 121 (300)
T COG4152 82 GLYPKMTVEDQLKYL-A--------------E------------------------LKGMPKAEIQKKLQAWLERLEIV- 121 (300)
T ss_pred ccCccCcHHHHHHHH-H--------------H------------------------hcCCcHHHHHHHHHHHHHhcccc-
Confidence 999999999887421 0 0 11234445667788889999997
Q ss_pred cccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHH---HccCCCeEEEEecCHHHHHhhcCeEE
Q 005532 251 DDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGY---LGKQDVPMVIISHDRAFLDQLCTKIV 327 (692)
Q Consensus 251 ~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~---L~~~~~tvI~vsHd~~~l~~~~d~i~ 327 (692)
....+++.+||-|.+|+|.+..+++++|+++|||||||||||...+.|.+. +++.|.|||++||.++.+..+||+++
T Consensus 122 ~~~~~kIk~LSKGnqQKIQfisaviHePeLlILDEPFSGLDPVN~elLk~~I~~lk~~GatIifSsH~Me~vEeLCD~ll 201 (300)
T COG4152 122 GKKTKKIKELSKGNQQKIQFISAVIHEPELLILDEPFSGLDPVNVELLKDAIFELKEEGATIIFSSHRMEHVEELCDRLL 201 (300)
T ss_pred ccccchHHHhhhhhhHHHHHHHHHhcCCCEEEecCCccCCChhhHHHHHHHHHHHHhcCCEEEEecchHHHHHHHhhhhh
Confidence 566778999999999999999999999999999999999999999999875 46789999999999999999999999
Q ss_pred EEecceEEEeccCh
Q 005532 328 ETEMGVSRTYEGNY 341 (692)
Q Consensus 328 ~l~~G~~~~~~G~y 341 (692)
.|+.|+. +..|+.
T Consensus 202 mL~kG~~-V~~G~v 214 (300)
T COG4152 202 MLKKGQT-VLYGTV 214 (300)
T ss_pred eecCCce-EEeccH
Confidence 9999997 456764
No 280
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-39 Score=347.75 Aligned_cols=210 Identities=23% Similarity=0.309 Sum_probs=176.0
Q ss_pred CCCCceEEEEeEEEEcCC-----eecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccce----
Q 005532 419 RSGRSVVTIKNLEFGYED-----RLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL---- 489 (692)
Q Consensus 419 ~~~~~~l~~~~l~~~y~~-----~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~~---- 489 (692)
.++.++|+++|+++.|++ +++|+|+||+|++|+++||+|+||||||||+++|+|+++|++|+|.++|.++.
T Consensus 16 ~~~~~~l~~~nl~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~p~~G~I~i~g~~~~~~~~ 95 (320)
T PRK13631 16 LSDDIILRVKNLYCVFDEKQENELVALNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIKSKYGTIQVGDIYIGDKKN 95 (320)
T ss_pred CCCCceEEEEeEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCEEcccccc
Confidence 445678999999999974 35999999999999999999999999999999999999999999999875431
Q ss_pred ----------------------eeeecccchhhcCCCccHHHHHHHHhcc--cc----HHHHHHHHhhcCCCcccccccC
Q 005532 490 ----------------------PNYFEQNQAEALDLDKTVLETVAEAAED--WR----IDDIKGLLGRCNFKADMLDRKV 541 (692)
Q Consensus 490 ----------------------~~~~~q~~~~~l~~~~tv~e~~~~~~~~--~~----~~~~~~~L~~~~l~~~~~~~~~ 541 (692)
.+|+.|+....+. ..|+.+|+...... .. ...+..+++.+++.....++++
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~-~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~ 174 (320)
T PRK13631 96 NHELITNPYSKKIKNFKELRRRVSMVFQFPEYQLF-KDTIEKDIMFGPVALGVKKSEAKKLAKFYLNKMGLDDSYLERSP 174 (320)
T ss_pred cccccccccccccchHHHHHhcEEEEEECchhccc-cchHHHHHHhhHHhcCCCHHHHHHHHHHHHHHcCCChhHhcCCc
Confidence 2456665432343 45999998754211 11 2346788999999645678999
Q ss_pred CCCCHHHHHHHHHHHHhccCCcEEEEeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhccEEEEEECCEE
Q 005532 542 SLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKGSNL 618 (692)
Q Consensus 542 ~~LSgGqkqrv~LAral~~~p~lLlLDEPTn~LD~~~~~~l~~~l~~~---~~tviivSHd~~~l~~~~d~i~~l~~g~l 618 (692)
.+|||||||||+|||||+.+|+||||||||++||+.++..+.+.|.++ +.|||+||||++++..+||+|++|++|++
T Consensus 175 ~~LSgGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~~L~~l~~~g~TiiivtHd~~~~~~~adri~vl~~G~i 254 (320)
T PRK13631 175 FGLSGGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQLILDAKANNKTVFVITHTMEHVLEVADEVIVMDKGKI 254 (320)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEE
Confidence 999999999999999999999999999999999999999999999764 46999999999999999999999999999
Q ss_pred EEecCChhHHHH
Q 005532 619 QDYAGDYNYYLE 630 (692)
Q Consensus 619 ~~~~g~~~~~~~ 630 (692)
+. .|+.+++..
T Consensus 255 ~~-~g~~~~~~~ 265 (320)
T PRK13631 255 LK-TGTPYEIFT 265 (320)
T ss_pred EE-eCCHHHHhc
Confidence 85 577666643
No 281
>PRK10419 nikE nickel transporter ATP-binding protein NikE; Provisional
Probab=100.00 E-value=1.1e-39 Score=340.84 Aligned_cols=206 Identities=27% Similarity=0.401 Sum_probs=170.3
Q ss_pred CcEEEEeEEEEeC---------CeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC------
Q 005532 96 SGVKLENISKSYK---------GVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN------ 160 (692)
Q Consensus 96 ~~l~i~~ls~~y~---------~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~------ 160 (692)
++|+++|++|.|+ ++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|..
T Consensus 2 ~~l~~~nl~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~sG~i~~~g~~~~~~~~ 81 (268)
T PRK10419 2 TLLNVSGLSHHYAHGGLSGKHQHQTVLNNVSLSLKSGETVALLGRSGCGKSTLARLLVGLESPSQGNVSWRGEPLAKLNR 81 (268)
T ss_pred ceEEEeceEEEecCCccccccCceeeEeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEeccccCh
Confidence 3599999999997 3679999999999999999999999999999999999999999999998742
Q ss_pred -------ceEEEEcccCc--cCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcC
Q 005532 161 -------MKIAFLSQEFE--VSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVN 231 (692)
Q Consensus 161 -------~~i~~v~Q~~~--~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (692)
..++|++|++. +.+..|+.+|+...... +. ..+
T Consensus 82 ~~~~~~~~~i~~v~q~~~~~~~~~~t~~~~l~~~~~~--------------~~------------------------~~~ 123 (268)
T PRK10419 82 AQRKAFRRDIQMVFQDSISAVNPRKTVREIIREPLRH--------------LL------------------------SLD 123 (268)
T ss_pred hHHHHHHhcEEEEEcChhhccCCCCCHHHHHHHHHHh--------------hc------------------------cCC
Confidence 25999999973 44567999887421100 00 000
Q ss_pred cccHHHHHHHHhhhcCCCccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc----CCC
Q 005532 232 LDTLDAKVSKLMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDV 307 (692)
Q Consensus 232 ~~~~~~~i~~ll~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~----~~~ 307 (692)
......++.++++.+|+.+...++++.+|||||+||++|||||+.+|+||||||||++||+.+++.+.++|++ .+.
T Consensus 124 ~~~~~~~~~~~l~~~gl~~~~~~~~~~~LS~Ge~qrl~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~ 203 (268)
T PRK10419 124 KAERLARASEMLRAVDLDDSVLDKRPPQLSGGQLQRVCLARALAVEPKLLILDEAVSNLDLVLQAGVIRLLKKLQQQFGT 203 (268)
T ss_pred HHHHHHHHHHHHHHcCCChhHhhCCCccCChHHHHHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHHcCc
Confidence 1112345667888889864567889999999999999999999999999999999999999999888877642 488
Q ss_pred eEEEEecCHHHHHhhcCeEEEEecceEEEeccC
Q 005532 308 PMVIISHDRAFLDQLCTKIVETEMGVSRTYEGN 340 (692)
Q Consensus 308 tvI~vsHd~~~l~~~~d~i~~l~~G~~~~~~G~ 340 (692)
|||+|||+++++..+||+|+++++|++. ..|.
T Consensus 204 tiiivsH~~~~i~~~~d~i~~l~~G~i~-~~g~ 235 (268)
T PRK10419 204 ACLFITHDLRLVERFCQRVMVMDNGQIV-ETQP 235 (268)
T ss_pred EEEEEECCHHHHHHhCCEEEEEECCEEe-eeCC
Confidence 9999999999999999999999999874 4454
No 282
>TIGR00968 3a0106s01 sulfate ABC transporter, ATP-binding protein.
Probab=100.00 E-value=1.1e-39 Score=334.88 Aligned_cols=204 Identities=32% Similarity=0.483 Sum_probs=172.1
Q ss_pred EEEEeEEEEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC--------ceEEEEccc
Q 005532 98 VKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN--------MKIAFLSQE 169 (692)
Q Consensus 98 l~i~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~--------~~i~~v~Q~ 169 (692)
|+++|++++|+++++|+|+||+|.+|++++|+|+||||||||+++|+|+++|++|+|.++|.+ ..++|++|+
T Consensus 1 i~i~~l~~~~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~i~g~~~~~~~~~~~~i~~~~q~ 80 (237)
T TIGR00968 1 IEIANISKRFGSFQALDDVNLEVPTGSLVALLGPSGSGKSTLLRIIAGLEQPDSGRIRLNGQDATRVHARDRKIGFVFQH 80 (237)
T ss_pred CEEEEEEEEECCeeeeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCChhhcCEEEEecC
Confidence 468999999998899999999999999999999999999999999999999999999988633 359999999
Q ss_pred CccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHHhhhcCCC
Q 005532 170 FEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFT 249 (692)
Q Consensus 170 ~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl~ 249 (692)
+.+++..|+.+|+...... . ........+.+.++++.+++.
T Consensus 81 ~~~~~~~t~~enl~~~~~~---------------~------------------------~~~~~~~~~~~~~~l~~~~l~ 121 (237)
T TIGR00968 81 YALFKHLTVRDNIAFGLEI---------------R------------------------KHPKAKIKARVEELLELVQLE 121 (237)
T ss_pred hhhccCCcHHHHHHhHHHh---------------c------------------------CCCHHHHHHHHHHHHHHcCCH
Confidence 9887778999998532100 0 000011223456778888886
Q ss_pred ccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc----CCCeEEEEecCHHHHHhhcCe
Q 005532 250 ADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVIISHDRAFLDQLCTK 325 (692)
Q Consensus 250 ~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~----~~~tvI~vsHd~~~l~~~~d~ 325 (692)
...++.+.+|||||+||++|||||+.+|+++||||||++||+.+++++.++|++ .++|||++||+++++..+||+
T Consensus 122 -~~~~~~~~~lS~G~~qrl~laral~~~p~llllDEP~~~LD~~~~~~~~~~l~~~~~~~~~tvli~sH~~~~~~~~~d~ 200 (237)
T TIGR00968 122 -GLGDRYPNQLSGGQRQRVALARALAVEPQVLLLDEPFGALDAKVRKELRSWLRKLHDEVHVTTVFVTHDQEEAMEVADR 200 (237)
T ss_pred -hHhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCE
Confidence 567888999999999999999999999999999999999999999999888753 378999999999999999999
Q ss_pred EEEEecceEEEeccChH
Q 005532 326 IVETEMGVSRTYEGNYS 342 (692)
Q Consensus 326 i~~l~~G~~~~~~G~y~ 342 (692)
|+++++|++. ..|..+
T Consensus 201 i~~l~~g~i~-~~~~~~ 216 (237)
T TIGR00968 201 IVVMSNGKIE-QIGSPD 216 (237)
T ss_pred EEEEECCEEE-EecCHH
Confidence 9999999984 455543
No 283
>TIGR02324 CP_lyasePhnL phosphonate C-P lyase system protein PhnL. Members of this family are the PhnL protein of C-P lyase systems for utilization of phosphonates. These systems resemble phosphonatase-based systems in having a three component ABC transporter, where TIGR01097 is the permease, TIGR01098 is the phosphonates binding protein, and TIGR02315 is the ATP-binding cassette (ABC) protein. They differ, however, in having, typically, ten or more additional genes, many of which are believed to form a membrane-associated C-P lysase complex. This protein (PhnL) and the adjacent-encoded PhnK (TIGR02323) resemble transporter ATP-binding proteins but are suggested, based on mutatgenesis studies, to be part of this C-P lyase complex rather than part of a transporter per se.
Probab=100.00 E-value=7.4e-40 Score=333.12 Aligned_cols=194 Identities=27% Similarity=0.399 Sum_probs=162.8
Q ss_pred cEEEEeEEEEeCC-------eeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEEC--CC--C-----
Q 005532 97 GVKLENISKSYKG-------VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKA--KS--N----- 160 (692)
Q Consensus 97 ~l~i~~ls~~y~~-------~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~--~~--~----- 160 (692)
+|+++|++++|++ .++|+|+||+|++|++++|+|+||||||||+++|+|+++|++|+|.++ |. +
T Consensus 1 ml~~~~l~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~~~g~~~~~~~~~ 80 (224)
T TIGR02324 1 LLEVEDLSKTFTLHQQGGVRLPVLKNVSLTVNAGECVALSGPSGAGKSTLLKSLYANYLPDSGRILVRHEGAWVDLAQAS 80 (224)
T ss_pred CEEEEeeEEEeecccCCCcceEEEecceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEEecCCCccchhhcC
Confidence 3789999999963 469999999999999999999999999999999999999999999997 31 1
Q ss_pred ---------ceEEEEcccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcC
Q 005532 161 ---------MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVN 231 (692)
Q Consensus 161 ---------~~i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (692)
..++|++|++.+++..|+.+|+...+.. . ...
T Consensus 81 ~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~---------------~------------------------~~~ 121 (224)
T TIGR02324 81 PREVLEVRRKTIGYVSQFLRVIPRVSALEVVAEPLLE---------------R------------------------GVP 121 (224)
T ss_pred HHHHHHHHhcceEEEecccccCCCccHHHHHHHHHHH---------------c------------------------CCC
Confidence 2599999999888888999998521100 0 000
Q ss_pred cccHHHHHHHHhhhcCCCccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc---CCCe
Q 005532 232 LDTLDAKVSKLMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK---QDVP 308 (692)
Q Consensus 232 ~~~~~~~i~~ll~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~---~~~t 308 (692)
.....+++.++++.+|+.....++++.+||||||||++|||||+.+|++|||||||++||+.+++++.++|++ .++|
T Consensus 122 ~~~~~~~~~~~l~~~~l~~~~~~~~~~~LS~G~~qrl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~t 201 (224)
T TIGR02324 122 REAARARARELLARLNIPERLWHLPPATFSGGEQQRVNIARGFIADYPILLLDEPTASLDAANRQVVVELIAEAKARGAA 201 (224)
T ss_pred HHHHHHHHHHHHHHcCCchhhhhCCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCE
Confidence 1112345667788889864445788999999999999999999999999999999999999999999887753 5889
Q ss_pred EEEEecCHHHHHhhcCeEEEE
Q 005532 309 MVIISHDRAFLDQLCTKIVET 329 (692)
Q Consensus 309 vI~vsHd~~~l~~~~d~i~~l 329 (692)
||+|||+.+++..+||+|+.+
T Consensus 202 ii~vsH~~~~~~~~~d~i~~~ 222 (224)
T TIGR02324 202 LIGIFHDEEVRELVADRVMDV 222 (224)
T ss_pred EEEEeCCHHHHHHhcceeEec
Confidence 999999999999999999876
No 284
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=1.1e-39 Score=352.63 Aligned_cols=203 Identities=27% Similarity=0.398 Sum_probs=177.4
Q ss_pred eEEEEeEEEEcCCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCe--eEEEECCccce--------eeee
Q 005532 424 VVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRG--GEVLLGEHNVL--------PNYF 493 (692)
Q Consensus 424 ~l~~~~l~~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~--G~i~~~~~~~~--------~~~~ 493 (692)
.|+++||+++|++..+|+++||+|.+||+++|+|||||||||||++|+|+++|++ |+|.++|.++. .+|+
T Consensus 5 ~l~~~~l~~~~~~~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~p~~~~G~i~~~g~~~~~~~~~~r~ig~v 84 (362)
T TIGR03258 5 GIRIDHLRVAYGANTVLDDLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVKAAGLTGRIAIADRDLTHAPPHKRGLALL 84 (362)
T ss_pred EEEEEEEEEEECCeEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCEEEEECCEECCCCCHHHCCEEEE
Confidence 4899999999998889999999999999999999999999999999999999999 99999987642 3566
Q ss_pred cccchhhcCCCccHHHHHHHHhccc--c----HHHHHHHHhhcCCCcccccccCCCCCHHHHHHHHHHHHhccCCcEEEE
Q 005532 494 EQNQAEALDLDKTVLETVAEAAEDW--R----IDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVL 567 (692)
Q Consensus 494 ~q~~~~~l~~~~tv~e~~~~~~~~~--~----~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~LAral~~~p~lLlL 567 (692)
+|+ ..+++.+|+.+|+....... . ...+.++++.+++. +..++++.+|||||||||+|||||+.+|+||||
T Consensus 85 fQ~--~~l~p~~tv~enl~~~l~~~~~~~~~~~~~v~~~l~~~gL~-~~~~~~~~~LSgGq~QRvaLARAL~~~P~llLL 161 (362)
T TIGR03258 85 FQN--YALFPHLKVEDNVAFGLRAQKMPKADIAERVADALKLVGLG-DAAAHLPAQLSGGMQQRIAIARAIAIEPDVLLL 161 (362)
T ss_pred ECC--cccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCC-chhhCChhhCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 765 35778999999998654211 1 23578899999995 678999999999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHhc-----CceEEEEecCHHHHHhhccEEEEEECCEEEEecCChhHHHH
Q 005532 568 DEPTNHLDIPSKEMLEEAISEY-----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYYLE 630 (692)
Q Consensus 568 DEPTn~LD~~~~~~l~~~l~~~-----~~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~~~~~ 630 (692)
||||++||+.++..|.+.|++. +.|+|+||||++++..+||+|++|++|++.. .|..++...
T Consensus 162 DEP~s~LD~~~r~~l~~~l~~l~~~~~g~til~vTHd~~ea~~l~dri~vl~~G~i~~-~g~~~~~~~ 228 (362)
T TIGR03258 162 DEPLSALDANIRANMREEIAALHEELPELTILCVTHDQDDALTLADKAGIMKDGRLAA-HGEPQALYD 228 (362)
T ss_pred cCccccCCHHHHHHHHHHHHHHHHhCCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEE-EcCHHHHHh
Confidence 9999999999999999988643 4599999999999999999999999999985 466655544
No 285
>PRK14253 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-39 Score=337.09 Aligned_cols=207 Identities=19% Similarity=0.302 Sum_probs=167.6
Q ss_pred CcEEEEeEEEEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCC-----CccEEEECCCC----------
Q 005532 96 SGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEP-----DSGNVIKAKSN---------- 160 (692)
Q Consensus 96 ~~l~i~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p-----~~G~I~~~~~~---------- 160 (692)
+.|+++|+++.|+++++|+|+||+|++|++++|+||||||||||+++|+|+++| ++|+|.++|.+
T Consensus 2 ~~l~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~~~ 81 (249)
T PRK14253 2 NKFNIENLDLFYGENQALKSINLPIPARQVTALIGPSGCGKSTLLRCLNRMNDLIEGVKITGKLTMDGEDIYGNIDVADL 81 (249)
T ss_pred CeEEEeccEEEECCeeeeecceEEecCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEEcccccchHHH
Confidence 358999999999988899999999999999999999999999999999999986 59999998732
Q ss_pred -ceEEEEcccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHH
Q 005532 161 -MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKV 239 (692)
Q Consensus 161 -~~i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 239 (692)
..++|++|++.++. .||.+|+...... ... ......++++
T Consensus 82 ~~~i~~~~q~~~~~~-~tv~~~l~~~~~~---------------~~~-----------------------~~~~~~~~~~ 122 (249)
T PRK14253 82 RIKVGMVFQKPNPFP-MSIYENVAYGLRA---------------QGI-----------------------KDKKVLDEVV 122 (249)
T ss_pred HhheeEEecCCCcCc-ccHHHHHHhHHHh---------------cCC-----------------------CchHHHHHHH
Confidence 24999999988765 8999998532110 000 0000112334
Q ss_pred HHHhhhcCCCc---cccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc--CCCeEEEEec
Q 005532 240 SKLMPELGFTA---DDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVIISH 314 (692)
Q Consensus 240 ~~ll~~lgl~~---~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~--~~~tvI~vsH 314 (692)
.++++.+|+.+ ...++++.+|||||||||+|||||+.+|+||||||||++||+.++.++.++|++ .+.|||+|||
T Consensus 123 ~~~~~~~~l~~~~~~~~~~~~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh 202 (249)
T PRK14253 123 ERSLRGAALWDEVKDRLKSHAFGLSGGQQQRLCIARTIAMEPDVILMDEPTSALDPIATHKIEELMEELKKNYTIVIVTH 202 (249)
T ss_pred HHHHHHcCCchhhhHHhhcCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEec
Confidence 44555555532 345678899999999999999999999999999999999999999999888753 3689999999
Q ss_pred CHHHHHhhcCeEEEEecceEEEeccChH
Q 005532 315 DRAFLDQLCTKIVETEMGVSRTYEGNYS 342 (692)
Q Consensus 315 d~~~l~~~~d~i~~l~~G~~~~~~G~y~ 342 (692)
+++++..+||+++++++|++. ..|...
T Consensus 203 ~~~~~~~~~d~i~~l~~G~i~-~~g~~~ 229 (249)
T PRK14253 203 SMQQARRISDRTAFFLMGELV-EHDDTQ 229 (249)
T ss_pred CHHHHHHhCCEEEEEECCEEE-EeCCHH
Confidence 999999999999999999984 456543
No 286
>PRK14249 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-39 Score=336.68 Aligned_cols=207 Identities=19% Similarity=0.279 Sum_probs=166.0
Q ss_pred CcEEEEeEEEEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCC-----ccEEEECCCC----------
Q 005532 96 SGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPD-----SGNVIKAKSN---------- 160 (692)
Q Consensus 96 ~~l~i~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~-----~G~I~~~~~~---------- 160 (692)
+.|+++|++|+|+++++|+|+||+|++|++++|+|+||||||||+++|+|+++|+ +|+|.++|.+
T Consensus 3 ~~l~~~~l~~~~~~~~il~~~s~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~~~ 82 (251)
T PRK14249 3 PKIKIRGVNFFYHKHQVLKNINMDFPERQITAIIGPSGCGKSTLLRALNRMNDIVSGARLEGAVLLDNENIYSPNLDVVN 82 (251)
T ss_pred ceEEEEEEEEEECCeeEecceEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCccccCCcccEEEECCEEccccccChHH
Confidence 4699999999999888999999999999999999999999999999999999997 6999987632
Q ss_pred --ceEEEEcccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHH
Q 005532 161 --MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAK 238 (692)
Q Consensus 161 --~~i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (692)
..++|++|++.+++ .|+.+|+...... ... ......+..
T Consensus 83 ~~~~i~~v~q~~~~~~-~tv~enl~~~~~~---------------~~~-----------------------~~~~~~~~~ 123 (251)
T PRK14249 83 LRKRVGMVFQQPNPFP-KSIFDNVAFGPRM---------------LGT-----------------------TAQSRLDEV 123 (251)
T ss_pred hhceEEEEecCCccCc-CcHHHHHhhHHHh---------------cCC-----------------------ChhhHHHHH
Confidence 25999999998765 5999998532100 000 000001122
Q ss_pred HHHHhhhcCCCc---cccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc--CCCeEEEEe
Q 005532 239 VSKLMPELGFTA---DDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVIIS 313 (692)
Q Consensus 239 i~~ll~~lgl~~---~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~--~~~tvI~vs 313 (692)
+.++++.+|+.. ...++++.+|||||||||+|||||+.+|++|||||||++||+.++.++.++|++ .+.|||+||
T Consensus 124 ~~~~l~~~~l~~~l~~~~~~~~~~LS~Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tilivs 203 (251)
T PRK14249 124 VEKSLRQAALWDEVKDNLHKSGLALSGGQQQRLCIARVLAIEPEVILMDEPCSALDPVSTMRIEELMQELKQNYTIAIVT 203 (251)
T ss_pred HHHHHHHhCCchhhhhHhhCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCEEEEEe
Confidence 333444444421 245778999999999999999999999999999999999999999999887754 478999999
Q ss_pred cCHHHHHhhcCeEEEEecceEEEeccChH
Q 005532 314 HDRAFLDQLCTKIVETEMGVSRTYEGNYS 342 (692)
Q Consensus 314 Hd~~~l~~~~d~i~~l~~G~~~~~~G~y~ 342 (692)
|+++++..+||+|+++++|++. +.|...
T Consensus 204 h~~~~~~~~~d~i~~l~~G~i~-~~~~~~ 231 (251)
T PRK14249 204 HNMQQAARASDWTGFLLTGDLV-EYGRTG 231 (251)
T ss_pred CCHHHHHhhCCEEEEEeCCeEE-EeCCHH
Confidence 9999999999999999999984 445543
No 287
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-39 Score=335.99 Aligned_cols=202 Identities=26% Similarity=0.361 Sum_probs=174.1
Q ss_pred eEEEEeEEEEcCCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccc---------------
Q 005532 424 VVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNV--------------- 488 (692)
Q Consensus 424 ~l~~~~l~~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~--------------- 488 (692)
+|+++|+++.|+++.+|+++||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++
T Consensus 2 ~l~~~~l~~~~~~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~ 81 (242)
T PRK11124 2 SIQLNGINCFYGAHQALFDITLDCPQGETLVLLGPSGAGKSSLLRVLNLLEMPRSGTLNIAGNHFDFSKTPSDKAIRELR 81 (242)
T ss_pred EEEEEeeEEEECCeeeEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecccccccchhhHHHHH
Confidence 48899999999988999999999999999999999999999999999999999999999988654
Q ss_pred -eeeeecccchhhcCCCccHHHHHHHH-hc---cc---cHHHHHHHHhhcCCCcccccccCCCCCHHHHHHHHHHHHhcc
Q 005532 489 -LPNYFEQNQAEALDLDKTVLETVAEA-AE---DW---RIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVK 560 (692)
Q Consensus 489 -~~~~~~q~~~~~l~~~~tv~e~~~~~-~~---~~---~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~LAral~~ 560 (692)
..+|++|. ..+++..|+.+|+... .. .. ....+.++++.+|+. ...++++.+|||||||||+|||||+.
T Consensus 82 ~~i~~~~q~--~~~~~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~~l~~~gl~-~~~~~~~~~LS~G~~qrv~laral~~ 158 (242)
T PRK11124 82 RNVGMVFQQ--YNLWPHLTVQQNLIEAPCRVLGLSKDQALARAEKLLERLRLK-PYADRFPLHLSGGQQQRVAIARALMM 158 (242)
T ss_pred hheEEEecC--ccccCCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCh-hhhhCChhhCCHHHHHHHHHHHHHhc
Confidence 13456654 3466678999998642 11 11 123577889999995 56789999999999999999999999
Q ss_pred CCcEEEEeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhccEEEEEECCEEEEecCChhHHH
Q 005532 561 PSTLLVLDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYYL 629 (692)
Q Consensus 561 ~p~lLlLDEPTn~LD~~~~~~l~~~l~~~---~~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~~~~ 629 (692)
+|+||||||||++||+.+++++.+.|+++ +.|||+||||.+++..+||++++|++|++. +.|+++++.
T Consensus 159 ~p~llilDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~~~~d~i~~l~~g~i~-~~~~~~~~~ 229 (242)
T PRK11124 159 EPQVLLFDEPTAALDPEITAQIVSIIRELAETGITQVIVTHEVEVARKTASRVVYMENGHIV-EQGDASCFT 229 (242)
T ss_pred CCCEEEEcCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEEECCEEE-EeCCHHHhc
Confidence 99999999999999999999999999864 469999999999999999999999999997 457777653
No 288
>PRK11144 modC molybdate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.5e-40 Score=353.42 Aligned_cols=195 Identities=26% Similarity=0.424 Sum_probs=167.8
Q ss_pred EEEEeEEEEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC--------------ceE
Q 005532 98 VKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN--------------MKI 163 (692)
Q Consensus 98 l~i~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~--------------~~i 163 (692)
|++ |++++|++..+ |+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.. ..|
T Consensus 2 l~~-~l~k~~~~~~~--~vsl~i~~Ge~~~l~G~nGsGKSTLl~~iaGl~~p~~G~I~~~g~~~~~~~~~~~~~~~~~~i 78 (352)
T PRK11144 2 LEL-NFKQQLGDLCL--TVNLTLPAQGITAIFGRSGAGKTSLINAISGLTRPQKGRIVLNGRVLFDAEKGICLPPEKRRI 78 (352)
T ss_pred eEE-EEEEEeCCEEE--EEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccccchhhCCE
Confidence 777 99999987543 8999999999999999999999999999999999999999987632 259
Q ss_pred EEEcccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHHh
Q 005532 164 AFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLM 243 (692)
Q Consensus 164 ~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll 243 (692)
+|++|++.+++..||++|+...+.. ....++.+++
T Consensus 79 ~~v~q~~~l~~~~tv~enl~~~~~~---------------------------------------------~~~~~~~~~l 113 (352)
T PRK11144 79 GYVFQDARLFPHYKVRGNLRYGMAK---------------------------------------------SMVAQFDKIV 113 (352)
T ss_pred EEEcCCcccCCCCcHHHHHHhhhhh---------------------------------------------hhHHHHHHHH
Confidence 9999999988899999998532110 0123456778
Q ss_pred hhcCCCccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc----CCCeEEEEecCHHHH
Q 005532 244 PELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVIISHDRAFL 319 (692)
Q Consensus 244 ~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~----~~~tvI~vsHd~~~l 319 (692)
+.+|+. +..++++.+|||||||||+|||||+.+|++|||||||++||+.+++.+.++|++ .+.|+|+||||++++
T Consensus 114 ~~~gl~-~~~~~~~~~LSgGq~qRvalaraL~~~p~llLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tii~vTHd~~~~ 192 (352)
T PRK11144 114 ALLGIE-PLLDRYPGSLSGGEKQRVAIGRALLTAPELLLMDEPLASLDLPRKRELLPYLERLAREINIPILYVSHSLDEI 192 (352)
T ss_pred HHcCCc-hhhhCCcccCCHHHHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEecCHHHH
Confidence 888986 567899999999999999999999999999999999999999999998887643 488999999999999
Q ss_pred HhhcCeEEEEecceEEEeccChH
Q 005532 320 DQLCTKIVETEMGVSRTYEGNYS 342 (692)
Q Consensus 320 ~~~~d~i~~l~~G~~~~~~G~y~ 342 (692)
..+||+|++|++|++. ..|...
T Consensus 193 ~~~~d~i~~l~~G~i~-~~g~~~ 214 (352)
T PRK11144 193 LRLADRVVVLEQGKVK-AFGPLE 214 (352)
T ss_pred HHhCCEEEEEeCCEEE-EecCHH
Confidence 9999999999999984 445543
No 289
>PRK14262 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-39 Score=336.58 Aligned_cols=207 Identities=22% Similarity=0.289 Sum_probs=168.4
Q ss_pred cEEEEeEEEEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCC-----CccEEEECCCC-----------
Q 005532 97 GVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEP-----DSGNVIKAKSN----------- 160 (692)
Q Consensus 97 ~l~i~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p-----~~G~I~~~~~~----------- 160 (692)
+|+++|+++.|+++++|+++||+|++|++++|+|+||||||||+++|+|+++| ++|+|.++|..
T Consensus 3 ~l~~~~l~~~~~~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~i~g~~~~~~~~~~~~~ 82 (250)
T PRK14262 3 IIEIENFSAYYGEKKAVKNVTMKIFKNQITAIIGPSGCGKTTLLRSINRMNDHIPGFRVEGKIYFKGQDIYDPQLDVTEY 82 (250)
T ss_pred eEEEEeeEEEeCCceeEeeeeEeecCCCEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEcccchhhHHHh
Confidence 59999999999988899999999999999999999999999999999999874 89999998732
Q ss_pred -ceEEEEcccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHH
Q 005532 161 -MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKV 239 (692)
Q Consensus 161 -~~i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 239 (692)
..++|++|++.++. .|+++|+....... .. ......+..+
T Consensus 83 ~~~i~~~~q~~~~~~-~tv~e~l~~~~~~~---------------~~-----------------------~~~~~~~~~~ 123 (250)
T PRK14262 83 RKKVGMVFQKPTPFP-MSIYDNVAFGPRIH---------------GV-----------------------KSKHKLDRIV 123 (250)
T ss_pred hhhEEEEecCCccCc-ccHHHHHHHHHHHc---------------CC-----------------------CcHHHHHHHH
Confidence 25999999988765 89999985321100 00 0000112334
Q ss_pred HHHhhhcCCCc---cccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc--CCCeEEEEec
Q 005532 240 SKLMPELGFTA---DDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVIISH 314 (692)
Q Consensus 240 ~~ll~~lgl~~---~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~--~~~tvI~vsH 314 (692)
.++++.+|+.. ...++++.+|||||+||++|||||+.+|+||||||||++||+.++.++.++|++ .+.|||+|||
T Consensus 124 ~~~l~~~~l~~~~~~~~~~~~~~LS~Gq~qr~~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tili~sH 203 (250)
T PRK14262 124 EESLKKAALWDEVKSELNKPGTRLSGGQQQRLCIARALAVEPEVILLDEPTSALDPIATQRIEKLLEELSENYTIVIVTH 203 (250)
T ss_pred HHHHHHcCCCchhHHHHhCChhhcCHHHHHHHHHHHHHhCCCCEEEEeCCccccCHHHHHHHHHHHHHHhcCcEEEEEeC
Confidence 45566666632 235778999999999999999999999999999999999999999999888753 3689999999
Q ss_pred CHHHHHhhcCeEEEEecceEEEeccChHH
Q 005532 315 DRAFLDQLCTKIVETEMGVSRTYEGNYSQ 343 (692)
Q Consensus 315 d~~~l~~~~d~i~~l~~G~~~~~~G~y~~ 343 (692)
+++++..+||+|+++++|++. ..|..++
T Consensus 204 ~~~~~~~~~d~i~~l~~G~i~-~~g~~~~ 231 (250)
T PRK14262 204 NIGQAIRIADYIAFMYRGELI-EYGPTRE 231 (250)
T ss_pred CHHHHHHhCCEEEEEECCEEE-EecCHHH
Confidence 999999999999999999984 4565443
No 290
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=100.00 E-value=7.8e-40 Score=332.22 Aligned_cols=192 Identities=31% Similarity=0.497 Sum_probs=164.9
Q ss_pred eEEEEeEEEEcCC----eecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccce----------
Q 005532 424 VVTIKNLEFGYED----RLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL---------- 489 (692)
Q Consensus 424 ~l~~~~l~~~y~~----~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~~---------- 489 (692)
+|+++||++.|++ +++|+++||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.++.
T Consensus 1 ~l~~~~v~~~~~~~~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 80 (221)
T TIGR02211 1 LLKCENLGKRYQEGKLDTRVLKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDNPTSGEVLFNGQSLSKLSSNERAKL 80 (221)
T ss_pred CEEEEeeeEEccCCCcceEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcCHhHHHHH
Confidence 3789999999974 57999999999999999999999999999999999999999999999886531
Q ss_pred ----eeeecccchhhcCCCccHHHHHHHHhc--cc----cHHHHHHHHhhcCCCcccccccCCCCCHHHHHHHHHHHHhc
Q 005532 490 ----PNYFEQNQAEALDLDKTVLETVAEAAE--DW----RIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMV 559 (692)
Q Consensus 490 ----~~~~~q~~~~~l~~~~tv~e~~~~~~~--~~----~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~LAral~ 559 (692)
.+|++|+ ..+.+..|+.+|+..... .. ....+.++++.+|+. ...++++.+|||||||||+|||+|+
T Consensus 81 ~~~~i~~v~q~--~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LS~G~~qrv~laral~ 157 (221)
T TIGR02211 81 RNKKLGFIYQF--HHLLPDFTALENVAMPLLIGKKSVKEAKERAYEMLEKVGLE-HRINHRPSELSGGERQRVAIARALV 157 (221)
T ss_pred HHhcEEEEecc--cccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCh-hhhhCChhhCCHHHHHHHHHHHHHh
Confidence 3456654 345567899999875321 11 123567899999995 5678999999999999999999999
Q ss_pred cCCcEEEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEECCEEE
Q 005532 560 KPSTLLVLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQ 619 (692)
Q Consensus 560 ~~p~lLlLDEPTn~LD~~~~~~l~~~l~~~----~~tviivSHd~~~l~~~~d~i~~l~~g~l~ 619 (692)
.+|+||||||||++||+.++..+.+.|.++ +.|||+||||++++.. ||+|++|++|+++
T Consensus 158 ~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~~~~~-~d~v~~l~~G~i~ 220 (221)
T TIGR02211 158 NQPSLVLADEPTGNLDNNNAKIIFDLMLELNRELNTSFLVVTHDLELAKK-LDRVLEMKDGQLF 220 (221)
T ss_pred CCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHhh-cCEEEEEeCCEec
Confidence 999999999999999999999999999754 4699999999999976 8999999999874
No 291
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=7.8e-40 Score=332.38 Aligned_cols=200 Identities=28% Similarity=0.408 Sum_probs=169.3
Q ss_pred EEEEeEEEEcCCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccce-----------eeee
Q 005532 425 VTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL-----------PNYF 493 (692)
Q Consensus 425 l~~~~l~~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~~-----------~~~~ 493 (692)
|+++||+++|+++++|+++||+|.+|+++||+||||||||||+++|+|+++|++|+|.++|.++. .+|+
T Consensus 1 l~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i~~~ 80 (222)
T cd03224 1 LEVENLNAGYGKSQILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLPPRSGSIRFDGRDITGLPPHERARAGIGYV 80 (222)
T ss_pred CEEeeEEeecCCeeEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCCCCHHHHHhcCeEEe
Confidence 57899999999888999999999999999999999999999999999999999999999886531 3455
Q ss_pred cccchhhcCCCccHHHHHHHHhccc----cHHHHHHHHhhc-CCCcccccccCCCCCHHHHHHHHHHHHhccCCcEEEEe
Q 005532 494 EQNQAEALDLDKTVLETVAEAAEDW----RIDDIKGLLGRC-NFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLD 568 (692)
Q Consensus 494 ~q~~~~~l~~~~tv~e~~~~~~~~~----~~~~~~~~L~~~-~l~~~~~~~~~~~LSgGqkqrv~LAral~~~p~lLlLD 568 (692)
+|.. .+.+..|+.+|+....... ....+..+++.+ ++ ....++++.+|||||||||+|||||+.+|++||||
T Consensus 81 ~q~~--~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~l-~~~~~~~~~~LS~G~~qrv~laral~~~p~llllD 157 (222)
T cd03224 81 PEGR--RIFPELTVEENLLLGAYARRRAKRKARLERVYELFPRL-KERRKQLAGTLSGGEQQMLAIARALMSRPKLLLLD 157 (222)
T ss_pred cccc--ccCCCCcHHHHHHHHhhhcCchhHHHHHHHHHHHHHhh-hhhhhCchhhCCHHHHHHHHHHHHHhcCCCEEEEC
Confidence 6543 4566789999987643211 122456677777 45 35678899999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhccEEEEEECCEEEEecCChhHH
Q 005532 569 EPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYY 628 (692)
Q Consensus 569 EPTn~LD~~~~~~l~~~l~~~---~~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~~~ 628 (692)
|||++||+.++..+.+.|+++ +.|||+||||.+++.++||+|++|++|++.. .|+.+++
T Consensus 158 EPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~-~~~~~~~ 219 (222)
T cd03224 158 EPSEGLAPKIVEEIFEAIRELRDEGVTILLVEQNARFALEIADRAYVLERGRVVL-EGTAAEL 219 (222)
T ss_pred CCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhccEEEEeeCCeEEE-eCCHHHH
Confidence 999999999999999999865 3599999999999999999999999999974 4655443
No 292
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=100.00 E-value=1.3e-39 Score=332.21 Aligned_cols=194 Identities=28% Similarity=0.411 Sum_probs=166.7
Q ss_pred ceEEEEeEEEEcCC----eecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccc----------
Q 005532 423 SVVTIKNLEFGYED----RLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNV---------- 488 (692)
Q Consensus 423 ~~l~~~~l~~~y~~----~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~---------- 488 (692)
++|+++||+++|++ ..+|+++||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++
T Consensus 5 ~~l~~~~l~~~~~~~~~~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 84 (228)
T PRK10584 5 NIVEVHHLKKSVGQGEHELSILTGVELVVKRGETIALIGESGSGKSTLLAILAGLDDGSSGEVSLVGQPLHQMDEEARAK 84 (228)
T ss_pred ceEEEeeeEEEccCCCcceEEEeccEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCCeeEEECCEEcccCCHHHHHH
Confidence 57999999999975 3599999999999999999999999999999999999999999999988643
Q ss_pred ----eeeeecccchhhcCCCccHHHHHHHHhc---c---ccHHHHHHHHhhcCCCcccccccCCCCCHHHHHHHHHHHHh
Q 005532 489 ----LPNYFEQNQAEALDLDKTVLETVAEAAE---D---WRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFM 558 (692)
Q Consensus 489 ----~~~~~~q~~~~~l~~~~tv~e~~~~~~~---~---~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~LAral 558 (692)
..+|++|+ ..+.+..|+.+|+..... . ....++.++++.+++. ...++++.+|||||||||+|||||
T Consensus 85 ~~~~~i~~~~q~--~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LS~Ge~qrl~la~al 161 (228)
T PRK10584 85 LRAKHVGFVFQS--FMLIPTLNALENVELPALLRGESSRQSRNGAKALLEQLGLG-KRLDHLPAQLSGGEQQRVALARAF 161 (228)
T ss_pred HHhheEEEEEcc--cccCCCcCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCH-hHhhCChhhCCHHHHHHHHHHHHH
Confidence 13455554 345667899999865321 1 1124578899999995 567889999999999999999999
Q ss_pred ccCCcEEEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEECCEEEE
Q 005532 559 VKPSTLLVLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQD 620 (692)
Q Consensus 559 ~~~p~lLlLDEPTn~LD~~~~~~l~~~l~~~----~~tviivSHd~~~l~~~~d~i~~l~~g~l~~ 620 (692)
+.+|+||||||||++||+.+++.+.+.|+++ +.|||+||||.+++.. ||++++|++|++..
T Consensus 162 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~-~d~i~~l~~g~i~~ 226 (228)
T PRK10584 162 NGRPDVLFADEPTGNLDRQTGDKIADLLFSLNREHGTTLILVTHDLQLAAR-CDRRLRLVNGQLQE 226 (228)
T ss_pred hcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHh-CCEEEEEECCEEEe
Confidence 9999999999999999999999999999754 4699999999999865 99999999999864
No 293
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE. This family represents the NikE subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase.
Probab=100.00 E-value=1.2e-39 Score=339.98 Aligned_cols=205 Identities=25% Similarity=0.451 Sum_probs=173.6
Q ss_pred eEEEEeEEEEcC---------CeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccce-----
Q 005532 424 VVTIKNLEFGYE---------DRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL----- 489 (692)
Q Consensus 424 ~l~~~~l~~~y~---------~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~~----- 489 (692)
+|+++||++.|+ ++.+|+++||+|++||++||+|+||||||||+++|+|+++|++|+|.++|.++.
T Consensus 2 ~l~~~~l~~~~~~~~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~ 81 (265)
T TIGR02769 2 LLEVRDVTHTYRTGGLFGAKQRAPVLTNVSLSIEEGETVGLLGRSGCGKSTLARLLLGLEKPAQGTVSFRGQDLYQLDRK 81 (265)
T ss_pred eEEEEeEEEEeccCccccccCceEEeeCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEccccCHH
Confidence 589999999996 367999999999999999999999999999999999999999999999886541
Q ss_pred --------eeeecccchhhcCCCccHHHHHHHHhc---cc----cHHHHHHHHhhcCCCcccccccCCCCCHHHHHHHHH
Q 005532 490 --------PNYFEQNQAEALDLDKTVLETVAEAAE---DW----RIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAF 554 (692)
Q Consensus 490 --------~~~~~q~~~~~l~~~~tv~e~~~~~~~---~~----~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~L 554 (692)
.+|++|.....+.+..|+.+|+..... .. ....+.++++.+|+.....++++.+|||||||||+|
T Consensus 82 ~~~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGe~qrv~l 161 (265)
T TIGR02769 82 QRRAFRRDVQLVFQDSPSAVNPRMTVRQIIGEPLRHLTSLDESEQKARIAELLDMVGLRSEDADKLPRQLSGGQLQRINI 161 (265)
T ss_pred HHHHHhhceEEEecChhhhcCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCChhhhhCChhhCCHHHHHHHHH
Confidence 356666533245567899999854321 11 123577899999995456788999999999999999
Q ss_pred HHHhccCCcEEEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEECCEEEEecCChhHHH
Q 005532 555 CKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYYL 629 (692)
Q Consensus 555 Aral~~~p~lLlLDEPTn~LD~~~~~~l~~~l~~~----~~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~~~~ 629 (692)
||||+.+|+||||||||++||+.++..+.+.|.++ +.|||+||||++++..+||++++|++|+++. .|..+++.
T Consensus 162 aral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~~~~~~~d~i~~l~~G~i~~-~g~~~~~~ 239 (265)
T TIGR02769 162 ARALAVKPKLIVLDEAVSNLDMVLQAVILELLRKLQQAFGTAYLFITHDLRLVQSFCQRVAVMDKGQIVE-ECDVAQLL 239 (265)
T ss_pred HHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHHhcEEEEEeCCEEEE-ECCHHHHc
Confidence 99999999999999999999999999999988764 5699999999999999999999999999974 57666554
No 294
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-39 Score=340.43 Aligned_cols=204 Identities=29% Similarity=0.400 Sum_probs=175.1
Q ss_pred CceEEEEeEEEEcCCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccce----------ee
Q 005532 422 RSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL----------PN 491 (692)
Q Consensus 422 ~~~l~~~~l~~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~~----------~~ 491 (692)
+++|+++|+++.|+++.+|+++||+|++|+++||+|+||||||||+++|+|+++|++|+|.++|.++. .+
T Consensus 9 ~~~l~i~~l~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 88 (265)
T PRK10575 9 DTTFALRNVSFRVPGRTLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQPPSEGEILLDAQPLESWSSKAFARKVA 88 (265)
T ss_pred CceEEEeeEEEEECCEEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEehhhCCHHHHhhheE
Confidence 45799999999999889999999999999999999999999999999999999999999999986541 35
Q ss_pred eecccchhhcCCCccHHHHHHHHhc----------cccHHHHHHHHhhcCCCcccccccCCCCCHHHHHHHHHHHHhccC
Q 005532 492 YFEQNQAEALDLDKTVLETVAEAAE----------DWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKP 561 (692)
Q Consensus 492 ~~~q~~~~~l~~~~tv~e~~~~~~~----------~~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~LAral~~~ 561 (692)
|++|.. .+.+..|+.+|+..... ......+..+++.+++. ...++++.+|||||||||+|||||+.+
T Consensus 89 ~v~q~~--~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LSgG~~qrv~laral~~~ 165 (265)
T PRK10575 89 YLPQQL--PAAEGMTVRELVAIGRYPWHGALGRFGAADREKVEEAISLVGLK-PLAHRLVDSLSGGERQRAWIAMLVAQD 165 (265)
T ss_pred EeccCC--CCCCCccHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCH-HHhcCCcccCCHHHHHHHHHHHHHhcC
Confidence 666542 34567899999875321 01123577899999995 567899999999999999999999999
Q ss_pred CcEEEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEECCEEEEecCChhHHH
Q 005532 562 STLLVLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYYL 629 (692)
Q Consensus 562 p~lLlLDEPTn~LD~~~~~~l~~~l~~~----~~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~~~~ 629 (692)
|+||||||||++||+.+++.+.+.|.++ +.|||+||||++++.++||+|++|++|++. ..|..+++.
T Consensus 166 p~lllLDEPt~~LD~~~~~~~~~~l~~l~~~~~~tiii~sH~~~~i~~~~d~i~~l~~G~i~-~~~~~~~~~ 236 (265)
T PRK10575 166 SRCLLLDEPTSALDIAHQVDVLALVHRLSQERGLTVIAVLHDINMAARYCDYLVALRGGEMI-AQGTPAELM 236 (265)
T ss_pred CCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCeEE-EecCHHHhc
Confidence 9999999999999999999999988764 469999999999999999999999999997 456666553
No 295
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-39 Score=341.12 Aligned_cols=202 Identities=28% Similarity=0.419 Sum_probs=173.4
Q ss_pred eEEEEeEEEEcC-CeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccce----------eee
Q 005532 424 VVTIKNLEFGYE-DRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL----------PNY 492 (692)
Q Consensus 424 ~l~~~~l~~~y~-~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~~----------~~~ 492 (692)
+|+++|+++.|+ +..+|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.++|.++. .+|
T Consensus 4 ~l~~~~l~~~~~~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~~ 83 (274)
T PRK13647 4 IIEVEDLHFRYKDGTKALKGLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYLPQRGRVKVMGREVNAENEKWVRSKVGL 83 (274)
T ss_pred eEEEEEEEEEeCCCCeeeeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCceEEEECCEECCCCCHHHHHhhEEE
Confidence 699999999996 567999999999999999999999999999999999999999999999986542 356
Q ss_pred ecccchhhcCCCccHHHHHHHHhcc--cc----HHHHHHHHhhcCCCcccccccCCCCCHHHHHHHHHHHHhccCCcEEE
Q 005532 493 FEQNQAEALDLDKTVLETVAEAAED--WR----IDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLV 566 (692)
Q Consensus 493 ~~q~~~~~l~~~~tv~e~~~~~~~~--~~----~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~LAral~~~p~lLl 566 (692)
++|+....+ +..|+.+|+...... .. ...+..+++.+++. ...++++.+|||||||||+|||||+.+|++||
T Consensus 84 v~q~~~~~~-~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~L~-~~~~~~~~~LSgG~~qrv~laraL~~~p~lll 161 (274)
T PRK13647 84 VFQDPDDQV-FSSTVWDDVAFGPVNMGLDKDEVERRVEEALKAVRMW-DFRDKPPYHLSYGQKKRVAIAGVLAMDPDVIV 161 (274)
T ss_pred EecChhhhh-ccCcHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCH-HHhcCChhhCCHHHHHHHHHHHHHHcCCCEEE
Confidence 777532223 467999999754221 11 23577889999995 66899999999999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhccEEEEEECCEEEEecCChhHH
Q 005532 567 LDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYY 628 (692)
Q Consensus 567 LDEPTn~LD~~~~~~l~~~l~~~---~~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~~~ 628 (692)
|||||++||+.++..+.+.|+++ +.|||+||||++++.++||+|++|++|++.. .|+.+.+
T Consensus 162 lDEPt~~LD~~~~~~l~~~l~~~~~~g~tili~tH~~~~~~~~~d~i~~l~~G~i~~-~g~~~~~ 225 (274)
T PRK13647 162 LDEPMAYLDPRGQETLMEILDRLHNQGKTVIVATHDVDLAAEWADQVIVLKEGRVLA-EGDKSLL 225 (274)
T ss_pred EECCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEE-ECCHHHh
Confidence 99999999999999999999865 4699999999999999999999999999985 4665544
No 296
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-39 Score=337.62 Aligned_cols=203 Identities=28% Similarity=0.404 Sum_probs=173.7
Q ss_pred ceEEEEeEEEEcCCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccce-----------ee
Q 005532 423 SVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL-----------PN 491 (692)
Q Consensus 423 ~~l~~~~l~~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~~-----------~~ 491 (692)
++|+++|+++.|+++++|+++||+|.+|++++|+|+||||||||+++|+|+++|++|+|.++|.++. ..
T Consensus 4 ~~l~~~~l~~~~~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i~ 83 (255)
T PRK11300 4 PLLSVSGLMMRFGGLLAVNNVNLEVREQEIVSLIGPNGAGKTTVFNCLTGFYKPTGGTILLRGQHIEGLPGHQIARMGVV 83 (255)
T ss_pred ceEEEeeEEEEECCEEEEEeeeeEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCcceEEECCEECCCCCHHHHHhcCeE
Confidence 4799999999999889999999999999999999999999999999999999999999999986541 23
Q ss_pred eecccchhhcCCCccHHHHHHHHhc------------------cc---cHHHHHHHHhhcCCCcccccccCCCCCHHHHH
Q 005532 492 YFEQNQAEALDLDKTVLETVAEAAE------------------DW---RIDDIKGLLGRCNFKADMLDRKVSLLSGGEKA 550 (692)
Q Consensus 492 ~~~q~~~~~l~~~~tv~e~~~~~~~------------------~~---~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkq 550 (692)
|++|+ ..+.+..|+.+|+..... .. ....+..+++.+|+. ...++++.+|||||||
T Consensus 84 ~~~q~--~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~-~~~~~~~~~LS~G~~q 160 (255)
T PRK11300 84 RTFQH--VRLFREMTVIENLLVAQHQQLKTGLFSGLLKTPAFRRAESEALDRAATWLERVGLL-EHANRQAGNLAYGQQR 160 (255)
T ss_pred EeccC--cccCCCCcHHHHHHHhhhccccchhhhhhccccccccchhHHHHHHHHHHHhCChh-hhhhCChhhCCHHHHH
Confidence 44554 356677899999875311 00 012467788999994 5689999999999999
Q ss_pred HHHHHHHhccCCcEEEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEECCEEEEecCChh
Q 005532 551 RLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYN 626 (692)
Q Consensus 551 rv~LAral~~~p~lLlLDEPTn~LD~~~~~~l~~~l~~~----~~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~ 626 (692)
||+|||||+.+|+||||||||++||+.++..+.+.|.++ +.|||+||||++++..+||++++|++|++. +.|..+
T Consensus 161 rv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~-~~~~~~ 239 (255)
T PRK11300 161 RLEIARCMVTQPEILMLDEPAAGLNPKETKELDELIAELRNEHNVTVLLIEHDMKLVMGISDRIYVVNQGTPL-ANGTPE 239 (255)
T ss_pred HHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHhhcCCEEEEEeCCHHHHHHhCCEEEEEECCeEE-ecCCHH
Confidence 999999999999999999999999999999999998754 469999999999999999999999999998 456655
Q ss_pred HHH
Q 005532 627 YYL 629 (692)
Q Consensus 627 ~~~ 629 (692)
++.
T Consensus 240 ~~~ 242 (255)
T PRK11300 240 EIR 242 (255)
T ss_pred HHh
Confidence 553
No 297
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=9.3e-40 Score=333.09 Aligned_cols=193 Identities=30% Similarity=0.475 Sum_probs=166.2
Q ss_pred EEEEeEEEEcCCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCC-----CCCeeEEEECCccce----------
Q 005532 425 VTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLE-----KPRGGEVLLGEHNVL---------- 489 (692)
Q Consensus 425 l~~~~l~~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~-----~p~~G~i~~~~~~~~---------- 489 (692)
|+++||++.|+++++|+++||+|++||++||+|+||||||||+++|+|++ +|++|+|.++|.++.
T Consensus 1 i~~~~l~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~ 80 (227)
T cd03260 1 IELRDLNVYYGDKHALKDISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGAPDEGEVLLDGKDIYDLDVDVLELR 80 (227)
T ss_pred CEEEEEEEEcCCceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCCeEEEECCEEhhhcchHHHHHH
Confidence 57899999999888999999999999999999999999999999999999 999999999886541
Q ss_pred --eeeecccchhhcCCCccHHHHHHHHhcc---cc----HHHHHHHHhhcCCCccccccc--CCCCCHHHHHHHHHHHHh
Q 005532 490 --PNYFEQNQAEALDLDKTVLETVAEAAED---WR----IDDIKGLLGRCNFKADMLDRK--VSLLSGGEKARLAFCKFM 558 (692)
Q Consensus 490 --~~~~~q~~~~~l~~~~tv~e~~~~~~~~---~~----~~~~~~~L~~~~l~~~~~~~~--~~~LSgGqkqrv~LAral 558 (692)
.+|++|+. .+. ..|+.+|+...... .. ...+..+++.+|+. ...+++ +.+|||||||||+|||||
T Consensus 81 ~~i~~~~q~~--~~~-~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~~~LSgG~~qrv~la~al 156 (227)
T cd03260 81 RRVGMVFQKP--NPF-PGSIYDNVAYGLRLHGIKLKEELDERVEEALRKAALW-DEVKDRLHALGLSGGQQQRLCLARAL 156 (227)
T ss_pred hhEEEEecCc--hhc-cccHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHcCCC-hHHhccCCcccCCHHHHHHHHHHHHH
Confidence 34566653 344 68999998753211 11 23567889999995 444555 599999999999999999
Q ss_pred ccCCcEEEEeCCCCCCCHHHHHHHHHHHHhcC--ceEEEEecCHHHHHhhccEEEEEECCEEEEe
Q 005532 559 VKPSTLLVLDEPTNHLDIPSKEMLEEAISEYK--GTVITVSHDRYFVKQIVNRVVEVKGSNLQDY 621 (692)
Q Consensus 559 ~~~p~lLlLDEPTn~LD~~~~~~l~~~l~~~~--~tviivSHd~~~l~~~~d~i~~l~~g~l~~~ 621 (692)
+.+|++|||||||++||+.+++.+.+.|+++. .|||+||||++++..+||++++|++|++..+
T Consensus 157 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~ 221 (227)
T cd03260 157 ANEPEVLLLDEPTSALDPISTAKIEELIAELKKEYTIVIVTHNMQQAARVADRTAFLLNGRLVEF 221 (227)
T ss_pred hcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhhCcEEEEEeccHHHHHHhCCEEEEEeCCEEEEe
Confidence 99999999999999999999999999998764 5999999999999999999999999999754
No 298
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.2e-39 Score=335.43 Aligned_cols=201 Identities=27% Similarity=0.444 Sum_probs=172.4
Q ss_pred EEEEeEEEEcCC-eecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccce----------eeee
Q 005532 425 VTIKNLEFGYED-RLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL----------PNYF 493 (692)
Q Consensus 425 l~~~~l~~~y~~-~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~~----------~~~~ 493 (692)
|+++||+++|++ +.+|+++||+|++|+++||+||||||||||+++|+|+++|++|+|.++|.++. .+|+
T Consensus 1 l~~~~l~~~~~~~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~~ 80 (242)
T cd03295 1 IEFENVTKRYGGGKKAVNNLNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIEPTSGEIFIDGEDIREQDPVELRRKIGYV 80 (242)
T ss_pred CEEEEEEEEeCCcceEeeeeEEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCeEcCcCChHHhhcceEEE
Confidence 478999999987 78999999999999999999999999999999999999999999999886542 2456
Q ss_pred cccchhhcCCCccHHHHHHHHhc--ccc----HHHHHHHHhhcCCCc-ccccccCCCCCHHHHHHHHHHHHhccCCcEEE
Q 005532 494 EQNQAEALDLDKTVLETVAEAAE--DWR----IDDIKGLLGRCNFKA-DMLDRKVSLLSGGEKARLAFCKFMVKPSTLLV 566 (692)
Q Consensus 494 ~q~~~~~l~~~~tv~e~~~~~~~--~~~----~~~~~~~L~~~~l~~-~~~~~~~~~LSgGqkqrv~LAral~~~p~lLl 566 (692)
+|. ..+.+..|+.+|+..... ... ...+.++++.+++.. ...++++.+|||||||||+|||||+.+|++||
T Consensus 81 ~q~--~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~LS~G~~qrv~laral~~~p~lll 158 (242)
T cd03295 81 IQQ--IGLFPHMTVEENIALVPKLLKWPKEKIRERADELLALVGLDPAEFADRYPHELSGGQQQRVGVARALAADPPLLL 158 (242)
T ss_pred ccC--ccccCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCcHHHHhcChhhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 654 346667899999875421 111 235778999999963 36788999999999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEECCEEEEecCChhHH
Q 005532 567 LDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYY 628 (692)
Q Consensus 567 LDEPTn~LD~~~~~~l~~~l~~~----~~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~~~ 628 (692)
|||||++||+.+++.+.+.|.++ +.|||+||||.+++..+||+|++|++|++.. .|+.+.+
T Consensus 159 lDEPt~~LD~~~~~~l~~~L~~~~~~~g~tvii~sH~~~~~~~~~d~i~~l~~G~i~~-~~~~~~~ 223 (242)
T cd03295 159 MDEPFGALDPITRDQLQEEFKRLQQELGKTIVFVTHDIDEAFRLADRIAIMKNGEIVQ-VGTPDEI 223 (242)
T ss_pred ecCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCEEEE-ecCHHHH
Confidence 99999999999999999999865 4599999999999999999999999999974 4665554
No 299
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-39 Score=353.29 Aligned_cols=206 Identities=27% Similarity=0.452 Sum_probs=178.5
Q ss_pred CCceEEEEeEEEEcCCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccce--------eee
Q 005532 421 GRSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL--------PNY 492 (692)
Q Consensus 421 ~~~~l~~~~l~~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~~--------~~~ 492 (692)
..++|+++|+++.|++..+|+++||+|++||+++|+|||||||||||++|+|+.+|++|+|.++|.++. .+|
T Consensus 16 ~~~~l~l~~v~~~~~~~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~~~r~ig~ 95 (377)
T PRK11607 16 LTPLLEIRNLTKSFDGQHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQPTAGQIMLDGVDLSHVPPYQRPINM 95 (377)
T ss_pred CCceEEEEeEEEEECCEEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHHHCCEEE
Confidence 356799999999999888999999999999999999999999999999999999999999999987652 467
Q ss_pred ecccchhhcCCCccHHHHHHHHhcc--cc----HHHHHHHHhhcCCCcccccccCCCCCHHHHHHHHHHHHhccCCcEEE
Q 005532 493 FEQNQAEALDLDKTVLETVAEAAED--WR----IDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLV 566 (692)
Q Consensus 493 ~~q~~~~~l~~~~tv~e~~~~~~~~--~~----~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~LAral~~~p~lLl 566 (692)
++|+ ..+++.+|+.+|+...... .. ..++.++++.+++. +..++++.+|||||||||+|||||+.+|+|||
T Consensus 96 vfQ~--~~lfp~ltv~eNi~~~l~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~~~~LSgGq~QRVaLARAL~~~P~lLL 172 (377)
T PRK11607 96 MFQS--YALFPHMTVEQNIAFGLKQDKLPKAEIASRVNEMLGLVHMQ-EFAKRKPHQLSGGQRQRVALARSLAKRPKLLL 172 (377)
T ss_pred EeCC--CccCCCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCc-hhhcCChhhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 7775 3578899999999865321 11 23577899999995 67899999999999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHH----hcCceEEEEecCHHHHHhhccEEEEEECCEEEEecCChhHHHH
Q 005532 567 LDEPTNHLDIPSKEMLEEAIS----EYKGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYYLE 630 (692)
Q Consensus 567 LDEPTn~LD~~~~~~l~~~l~----~~~~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~~~~~ 630 (692)
|||||++||..+++.|.+.|+ +++.|+|+||||.+++..+||+|++|++|++... |..+++..
T Consensus 173 LDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~laDri~vl~~G~i~~~-g~~~~~~~ 239 (377)
T PRK11607 173 LDEPMGALDKKLRDRMQLEVVDILERVGVTCVMVTHDQEEAMTMAGRIAIMNRGKFVQI-GEPEEIYE 239 (377)
T ss_pred EeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEeCCEEEEE-cCHHHHHh
Confidence 999999999999998886654 3467999999999999999999999999999865 65554433
No 300
>PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-39 Score=347.22 Aligned_cols=207 Identities=23% Similarity=0.388 Sum_probs=177.6
Q ss_pred CceEEEEeEEEEcCC----------eecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccc---
Q 005532 422 RSVVTIKNLEFGYED----------RLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNV--- 488 (692)
Q Consensus 422 ~~~l~~~~l~~~y~~----------~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~--- 488 (692)
+++|+++||++.|+. ..+|+||||+|.+||++||+|+||||||||+++|+|+++|++|+|.++|.++
T Consensus 3 ~~~l~v~nl~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~IvG~sGsGKSTLl~~l~gl~~p~~G~i~~~g~~l~~~ 82 (327)
T PRK11308 3 QPLLQAIDLKKHYPVKRGLFKPERLVKALDGVSFTLERGKTLAVVGESGCGKSTLARLLTMIETPTGGELYYQGQDLLKA 82 (327)
T ss_pred CceEEEeeeEEEEcCCCCccccCCceeEEeeeEEEECCCCEEEEECCCCCcHHHHHHHHHcCCCCCCcEEEECCEEcCcC
Confidence 457999999999962 4689999999999999999999999999999999999999999999998664
Q ss_pred ----------eeeeecccchhhcCCCccHHHHHHHHhc----cc---cHHHHHHHHhhcCCCcccccccCCCCCHHHHHH
Q 005532 489 ----------LPNYFEQNQAEALDLDKTVLETVAEAAE----DW---RIDDIKGLLGRCNFKADMLDRKVSLLSGGEKAR 551 (692)
Q Consensus 489 ----------~~~~~~q~~~~~l~~~~tv~e~~~~~~~----~~---~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqr 551 (692)
..+|++|++...+++.+++.+++..... .. ....+.++|+.+|+.....++++.+||||||||
T Consensus 83 ~~~~~~~~r~~i~~v~Q~~~~~l~p~~~v~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~p~~LSgGq~QR 162 (327)
T PRK11308 83 DPEAQKLLRQKIQIVFQNPYGSLNPRKKVGQILEEPLLINTSLSAAERREKALAMMAKVGLRPEHYDRYPHMFSGGQRQR 162 (327)
T ss_pred CHHHHHHHhCCEEEEEcCchhhcCCccCHHHHHHHHHHHccCCCHHHHHHHHHHHHHHCCCChHHhcCCCccCCHHHHHH
Confidence 1457777765567888899888764321 11 123578899999996556799999999999999
Q ss_pred HHHHHHhccCCcEEEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEECCEEEEecCChhH
Q 005532 552 LAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNY 627 (692)
Q Consensus 552 v~LAral~~~p~lLlLDEPTn~LD~~~~~~l~~~l~~~----~~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~~ 627 (692)
|+|||||+.+|+|||+||||++||+.++..+.++|.++ +.|||+||||+.++..+||+|++|++|+++++ |+-++
T Consensus 163 v~iArAL~~~P~lLilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~~~~~~adrv~vm~~G~ive~-g~~~~ 241 (327)
T PRK11308 163 IAIARALMLDPDVVVADEPVSALDVSVQAQVLNLMMDLQQELGLSYVFISHDLSVVEHIADEVMVMYLGRCVEK-GTKEQ 241 (327)
T ss_pred HHHHHHHHcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEE-CCHHH
Confidence 99999999999999999999999999999999988754 56999999999999999999999999999864 55544
Q ss_pred HH
Q 005532 628 YL 629 (692)
Q Consensus 628 ~~ 629 (692)
..
T Consensus 242 ~~ 243 (327)
T PRK11308 242 IF 243 (327)
T ss_pred Hh
Confidence 43
No 301
>COG0411 LivG ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=2.5e-40 Score=326.77 Aligned_cols=206 Identities=28% Similarity=0.401 Sum_probs=180.3
Q ss_pred ceEEEEeEEEEcCCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCcccee---------eee
Q 005532 423 SVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLP---------NYF 493 (692)
Q Consensus 423 ~~l~~~~l~~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~~~---------~~~ 493 (692)
+++++++++++||+-.+++||||+|++||++|||||||||||||+++|+|+++|++|+|.++|.++.. +..
T Consensus 3 ~lL~v~~l~k~FGGl~Al~~Vsl~v~~Gei~~LIGPNGAGKTTlfNlitG~~~P~~G~v~~~G~~it~l~p~~iar~Gi~ 82 (250)
T COG0411 3 PLLEVRGLSKRFGGLTAVNDVSLEVRPGEIVGLIGPNGAGKTTLFNLITGFYKPSSGTVIFRGRDITGLPPHRIARLGIA 82 (250)
T ss_pred ceeeeccceeecCCEEEEeceeEEEcCCeEEEEECCCCCCceeeeeeecccccCCCceEEECCcccCCCCHHHHHhccce
Confidence 57899999999999999999999999999999999999999999999999999999999999987631 222
Q ss_pred cccchhhcCCCccHHHHHHHHhc------------cc------cHHHHHHHHhhcCCCcccccccCCCCCHHHHHHHHHH
Q 005532 494 EQNQAEALDLDKTVLETVAEAAE------------DW------RIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFC 555 (692)
Q Consensus 494 ~q~~~~~l~~~~tv~e~~~~~~~------------~~------~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~LA 555 (692)
.-.|...+++++||.||+..+.. .| ..+++..+|+.+|+. +..+.+..+||+|||+||-||
T Consensus 83 RTFQ~~rlF~~lTVlENv~va~~~~~~~~~~l~~~~~~~~e~~~~e~A~~~Le~vgL~-~~a~~~A~~LsyG~qR~LEIA 161 (250)
T COG0411 83 RTFQITRLFPGLTVLENVAVGAHARLGLSGLLGRPRARKEEREARERARELLEFVGLG-ELADRPAGNLSYGQQRRLEIA 161 (250)
T ss_pred eecccccccCCCcHHHHHHHHhhhhhhhhhhhccccchhhHHHHHHHHHHHHHHcCCc-hhhcchhhcCChhHhHHHHHH
Confidence 22233467899999999987532 11 124588899999995 678999999999999999999
Q ss_pred HHhccCCcEEEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEECCEEEEecCChhHHHH
Q 005532 556 KFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYYLE 630 (692)
Q Consensus 556 ral~~~p~lLlLDEPTn~LD~~~~~~l~~~l~~~----~~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~~~~~ 630 (692)
|||+.+|+|||||||.+||.+.....+.+.|++. +.||++|-||+.++..+||||++|+.|++. ..|++++..+
T Consensus 162 rALa~~P~lLLLDEPaAGln~~e~~~l~~~i~~i~~~~g~tillIEHdM~~Vm~l~dri~Vl~~G~~I-AeG~P~eV~~ 239 (250)
T COG0411 162 RALATQPKLLLLDEPAAGLNPEETEELAELIRELRDRGGVTILLIEHDMKLVMGLADRIVVLNYGEVI-AEGTPEEVRN 239 (250)
T ss_pred HHHhcCCCEEEecCccCCCCHHHHHHHHHHHHHHHhcCCcEEEEEEeccHHHhhhccEEEeccCCcCc-ccCCHHHHhc
Confidence 9999999999999999999999999999998765 359999999999999999999999999987 4698887754
No 302
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-39 Score=343.47 Aligned_cols=205 Identities=25% Similarity=0.358 Sum_probs=173.8
Q ss_pred eEEEEeEEEEcCC-----eecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccce---------
Q 005532 424 VVTIKNLEFGYED-----RLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL--------- 489 (692)
Q Consensus 424 ~l~~~~l~~~y~~-----~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~~--------- 489 (692)
.|+++||++.|++ +++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.++|.++.
T Consensus 2 ~l~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~i~~~~~~~~~~ 81 (286)
T PRK13646 2 TIRFDNVSYTYQKGTPYEHQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLKPTTGTVTVDDITITHKTKDKYIR 81 (286)
T ss_pred EEEEEEEEEEECCCCccccCceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHH
Confidence 3899999999963 36999999999999999999999999999999999999999999999986541
Q ss_pred -----eeeecccchhhcCCCccHHHHHHHHhcc--c----cHHHHHHHHhhcCCCcccccccCCCCCHHHHHHHHHHHHh
Q 005532 490 -----PNYFEQNQAEALDLDKTVLETVAEAAED--W----RIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFM 558 (692)
Q Consensus 490 -----~~~~~q~~~~~l~~~~tv~e~~~~~~~~--~----~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~LAral 558 (692)
.+|++|+....++ ..|+.+|+...... . ....+.++++.+|+.....++++.+|||||||||+|||||
T Consensus 82 ~~~~~ig~v~q~~~~~l~-~~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~~LSgGq~qrv~laraL 160 (286)
T PRK13646 82 PVRKRIGMVFQFPESQLF-EDTVEREIIFGPKNFKMNLDEVKNYAHRLLMDLGFSRDVMSQSPFQMSGGQMRKIAIVSIL 160 (286)
T ss_pred HHHhheEEEecChHhccc-hhhHHHHHHhhHHHcCCCHHHHHHHHHHHHHHcCCChhhhhCCcccCCHHHHHHHHHHHHH
Confidence 3577776432343 35999999764221 1 1235678899999954567889999999999999999999
Q ss_pred ccCCcEEEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEECCEEEEecCChhHHHH
Q 005532 559 VKPSTLLVLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYYLE 630 (692)
Q Consensus 559 ~~~p~lLlLDEPTn~LD~~~~~~l~~~l~~~----~~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~~~~~ 630 (692)
+.+|+||||||||++||+.++.++.++|+++ +.|||+||||++++..+||||++|++|+++. .|..+++..
T Consensus 161 ~~~p~illlDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvl~vtH~~~~~~~~~dri~~l~~G~i~~-~g~~~~~~~ 235 (286)
T PRK13646 161 AMNPDIIVLDEPTAGLDPQSKRQVMRLLKSLQTDENKTIILVSHDMNEVARYADEVIVMKEGSIVS-QTSPKELFK 235 (286)
T ss_pred HhCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEE-ECCHHHHHh
Confidence 9999999999999999999999999999864 4599999999999999999999999999984 577666543
No 303
>TIGR02323 CP_lyasePhnK phosphonate C-P lyase system protein PhnK. Members of this family are the PhnK protein of C-P lyase systems for utilization of phosphonates. These systems resemble phosphonatase-based systems in having a three component ABC transporter, where TIGR01097 is the permease, TIGR01098 is the phosphonates binding protein, and TIGR02315 is the ATP-binding cassette (ABC) protein. They differ, however, in having, typically, ten or more additional genes, many of which are believed to form a membrane-associated complex. This protein (PhnK) and the adjacent-encoded PhnL resemble transporter ATP-binding proteins but are suggested, based on mutatgenesis studies, to be part of this complex rather than part of a transporter per se.
Probab=100.00 E-value=1.7e-39 Score=336.59 Aligned_cols=206 Identities=21% Similarity=0.322 Sum_probs=172.0
Q ss_pred ceEEEEeEEEEcCCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCcc-----ce--------
Q 005532 423 SVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHN-----VL-------- 489 (692)
Q Consensus 423 ~~l~~~~l~~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~-----~~-------- 489 (692)
++|+++||++.|+++.+|+++||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|.+ +.
T Consensus 2 ~~l~~~~l~~~~~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 81 (253)
T TIGR02323 2 PLLQVSGLSKSYGGGKGCRDVSFDLYPGEVLGIVGESGSGKSTLLGCLAGRLAPDHGTATYIMRSGAELELYQLSEAERR 81 (253)
T ss_pred ceEEEeeeEEEeCCceEeecceEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEEecccccccccccCCHHHHH
Confidence 46999999999988889999999999999999999999999999999999999999999998754 21
Q ss_pred ------eeeecccchhhcCCCccHHHHHHHHh---c--cc--cHHHHHHHHhhcCCCcccccccCCCCCHHHHHHHHHHH
Q 005532 490 ------PNYFEQNQAEALDLDKTVLETVAEAA---E--DW--RIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCK 556 (692)
Q Consensus 490 ------~~~~~q~~~~~l~~~~tv~e~~~~~~---~--~~--~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~LAr 556 (692)
.+|+.|.....+.+..++.+++.... . .+ ....+.++++.+++.....++++..|||||||||+|||
T Consensus 82 ~~~~~~i~~~~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~LSgG~~qrv~lar 161 (253)
T TIGR02323 82 RLMRTEWGFVHQNPRDGLRMRVSAGANIGERLMAIGARHYGNIRAAAHDWLEEVEIDPTRIDDLPRAFSGGMQQRLQIAR 161 (253)
T ss_pred HhhhcceEEEEeCcccccCccccHHHHHHHHHHHhcccchHHHHHHHHHHHHHcCCChhhhhcCchhcCHHHHHHHHHHH
Confidence 34555543223445567777775321 1 11 12457789999999544678899999999999999999
Q ss_pred HhccCCcEEEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEECCEEEEecCChhHHH
Q 005532 557 FMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYYL 629 (692)
Q Consensus 557 al~~~p~lLlLDEPTn~LD~~~~~~l~~~l~~~----~~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~~~~ 629 (692)
||+.+|++|||||||+|||+.+++.+.+.|.++ +.|||+||||.+++..+||++++|++|++.. .|..+++.
T Consensus 162 al~~~p~vlllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~vsH~~~~~~~~~d~~~~l~~G~i~~-~~~~~~~~ 237 (253)
T TIGR02323 162 NLVTRPRLVFMDEPTGGLDVSVQARLLDLLRGLVRDLGLAVIIVTHDLGVARLLAQRLLVMQQGRVVE-SGLTDQVL 237 (253)
T ss_pred HHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEE-ECCHHHHh
Confidence 999999999999999999999999999988754 5699999999999999999999999999974 46655553
No 304
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-39 Score=342.78 Aligned_cols=207 Identities=22% Similarity=0.324 Sum_probs=171.5
Q ss_pred CcEEEEeEEEEeCC------eeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC---------
Q 005532 96 SGVKLENISKSYKG------VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN--------- 160 (692)
Q Consensus 96 ~~l~i~~ls~~y~~------~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~--------- 160 (692)
++|+++|++++|++ +++|+|+||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|..
T Consensus 3 ~~l~~~~l~~~~~~~~~~~~~~vl~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~ 82 (280)
T PRK13633 3 EMIKCKNVSYKYESNEESTEKLALDDVNLEVKKGEFLVILGRNGSGKSTIAKHMNALLIPSEGKVYVDGLDTSDEENLWD 82 (280)
T ss_pred ceEEEeeeEEEcCCCCCCCCcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEeccccccHHH
Confidence 36999999999963 469999999999999999999999999999999999999999999998632
Q ss_pred --ceEEEEcccCcc-CCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHH
Q 005532 161 --MKIAFLSQEFEV-SMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDA 237 (692)
Q Consensus 161 --~~i~~v~Q~~~~-~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (692)
..|+|++|++.. ++..|+.+|+...... ..........
T Consensus 83 ~~~~i~~v~q~~~~~~~~~~v~~~l~~~~~~---------------------------------------~~~~~~~~~~ 123 (280)
T PRK13633 83 IRNKAGMVFQNPDNQIVATIVEEDVAFGPEN---------------------------------------LGIPPEEIRE 123 (280)
T ss_pred HhhheEEEecChhhhhccccHHHHHHhhHhh---------------------------------------cCCCHHHHHH
Confidence 248999999742 2346888887422100 0011122345
Q ss_pred HHHHHhhhcCCCccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc----CCCeEEEEe
Q 005532 238 KVSKLMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVIIS 313 (692)
Q Consensus 238 ~i~~ll~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~----~~~tvI~vs 313 (692)
++.++++.+|+. ...++++.+|||||||||+|||||+.+|++|||||||++||+.++..|.++|++ .+.|||+||
T Consensus 124 ~~~~~l~~~gL~-~~~~~~~~~LS~G~~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvt 202 (280)
T PRK13633 124 RVDESLKKVGMY-EYRRHAPHLLSGGQKQRVAIAGILAMRPECIIFDEPTAMLDPSGRREVVNTIKELNKKYGITIILIT 202 (280)
T ss_pred HHHHHHHHCCCH-hHhhCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEe
Confidence 567888899996 577899999999999999999999999999999999999999999999887753 489999999
Q ss_pred cCHHHHHhhcCeEEEEecceEEEeccChHHH
Q 005532 314 HDRAFLDQLCTKIVETEMGVSRTYEGNYSQY 344 (692)
Q Consensus 314 Hd~~~l~~~~d~i~~l~~G~~~~~~G~y~~~ 344 (692)
||++++.. ||+++++++|++. +.|...++
T Consensus 203 H~~~~~~~-~d~v~~l~~G~i~-~~g~~~~~ 231 (280)
T PRK13633 203 HYMEEAVE-ADRIIVMDSGKVV-MEGTPKEI 231 (280)
T ss_pred cChHHHhc-CCEEEEEECCEEE-EecCHHHH
Confidence 99999986 9999999999974 56765544
No 305
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-39 Score=340.85 Aligned_cols=206 Identities=24% Similarity=0.405 Sum_probs=171.2
Q ss_pred CcEEEEeEEEEeCC--eeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC----------ceE
Q 005532 96 SGVKLENISKSYKG--VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN----------MKI 163 (692)
Q Consensus 96 ~~l~i~~ls~~y~~--~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~----------~~i 163 (692)
++|+++|++++|++ .++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.. ..|
T Consensus 6 ~~l~i~~l~~~~~~~~~~~l~~isl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i 85 (269)
T PRK13648 6 SIIVFKNVSFQYQSDASFTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEKVKSGEIFYNNQAITDDNFEKLRKHI 85 (269)
T ss_pred ceEEEEEEEEEcCCCCCcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhhe
Confidence 46999999999975 359999999999999999999999999999999999999999999998743 259
Q ss_pred EEEcccCc-cCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHH
Q 005532 164 AFLSQEFE-VSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKL 242 (692)
Q Consensus 164 ~~v~Q~~~-~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l 242 (692)
+|++|++. .++..|+.+|+...... . .........++.++
T Consensus 86 ~~v~q~~~~~~~~~~v~~~~~~~~~~-----------------~----------------------~~~~~~~~~~~~~~ 126 (269)
T PRK13648 86 GIVFQNPDNQFVGSIVKYDVAFGLEN-----------------H----------------------AVPYDEMHRRVSEA 126 (269)
T ss_pred eEEEeChHHhcccccHHHHHHhhHHh-----------------c----------------------CCCHHHHHHHHHHH
Confidence 99999985 55677898887422100 0 00011123456677
Q ss_pred hhhcCCCccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc----CCCeEEEEecCHHH
Q 005532 243 MPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVIISHDRAF 318 (692)
Q Consensus 243 l~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~----~~~tvI~vsHd~~~ 318 (692)
++.+|+. +..++++.+||||||||++|||||+.+|+||||||||++||+.+++.+.++|++ .+.|||+|||++++
T Consensus 127 l~~~~l~-~~~~~~~~~LS~G~~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tiiivtH~~~~ 205 (269)
T PRK13648 127 LKQVDML-ERADYEPNALSGGQKQRVAIAGVLALNPSVIILDEATSMLDPDARQNLLDLVRKVKSEHNITIISITHDLSE 205 (269)
T ss_pred HHHcCCc-hhhhCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCchH
Confidence 8888986 567888999999999999999999999999999999999999999999887753 47899999999999
Q ss_pred HHhhcCeEEEEecceEEEeccChHH
Q 005532 319 LDQLCTKIVETEMGVSRTYEGNYSQ 343 (692)
Q Consensus 319 l~~~~d~i~~l~~G~~~~~~G~y~~ 343 (692)
+.. ||+|+++++|++. +.|..++
T Consensus 206 ~~~-~d~i~~l~~G~i~-~~g~~~~ 228 (269)
T PRK13648 206 AME-ADHVIVMNKGTVY-KEGTPTE 228 (269)
T ss_pred Hhc-CCEEEEEECCEEE-EecCHHH
Confidence 986 9999999999984 5566544
No 306
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-39 Score=342.83 Aligned_cols=207 Identities=23% Similarity=0.366 Sum_probs=172.8
Q ss_pred CcEEEEeEEEEeCC--eeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCc---cEEEECCCC----------
Q 005532 96 SGVKLENISKSYKG--VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDS---GNVIKAKSN---------- 160 (692)
Q Consensus 96 ~~l~i~~ls~~y~~--~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~---G~I~~~~~~---------- 160 (692)
.+|+++|++|.|++ +++|+++||+|++|++++|+||||||||||+++|+|+++|++ |+|.++|..
T Consensus 4 ~~l~i~~l~~~~~~~~~~~l~~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~~~~~~~~~~~~ 83 (282)
T PRK13640 4 NIVEFKHVSFTYPDSKKPALNDISFSIPRGSWTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGITLTAKTVWDIR 83 (282)
T ss_pred ceEEEEEEEEEcCCCCccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCEECCcCCHHHHH
Confidence 35999999999975 469999999999999999999999999999999999999987 899998743
Q ss_pred ceEEEEcccCc-cCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHH
Q 005532 161 MKIAFLSQEFE-VSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKV 239 (692)
Q Consensus 161 ~~i~~v~Q~~~-~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 239 (692)
..|+|++|++. .++..||.||+...... .........+++
T Consensus 84 ~~ig~v~q~~~~~~~~~tv~enl~~~~~~---------------------------------------~~~~~~~~~~~~ 124 (282)
T PRK13640 84 EKVGIVFQNPDNQFVGATVGDDVAFGLEN---------------------------------------RAVPRPEMIKIV 124 (282)
T ss_pred hheEEEEECHHHhhccCCHHHHHHhhHHh---------------------------------------CCCCHHHHHHHH
Confidence 25999999985 45678999998521100 001112233556
Q ss_pred HHHhhhcCCCccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc----CCCeEEEEecC
Q 005532 240 SKLMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVIISHD 315 (692)
Q Consensus 240 ~~ll~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~----~~~tvI~vsHd 315 (692)
.++++.+|+. ...++++.+|||||+|||+|||||+.+|++|||||||++||+.++.++.++|++ .|.|||+|||+
T Consensus 125 ~~~l~~~~L~-~~~~~~~~~LS~G~~qrv~laral~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~ 203 (282)
T PRK13640 125 RDVLADVGML-DYIDSEPANLSGGQKQRVAIAGILAVEPKIIILDESTSMLDPAGKEQILKLIRKLKKKNNLTVISITHD 203 (282)
T ss_pred HHHHHHCCCh-hHhcCCcccCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecC
Confidence 7788899996 567899999999999999999999999999999999999999999999887743 48899999999
Q ss_pred HHHHHhhcCeEEEEecceEEEeccChHHH
Q 005532 316 RAFLDQLCTKIVETEMGVSRTYEGNYSQY 344 (692)
Q Consensus 316 ~~~l~~~~d~i~~l~~G~~~~~~G~y~~~ 344 (692)
++++. .||+|+++++|++. ..|...++
T Consensus 204 ~~~~~-~~d~i~~l~~G~i~-~~g~~~~~ 230 (282)
T PRK13640 204 IDEAN-MADQVLVLDDGKLL-AQGSPVEI 230 (282)
T ss_pred HHHHH-hCCEEEEEECCEEE-EeCCHHHH
Confidence 99995 79999999999984 55665443
No 307
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-39 Score=340.48 Aligned_cols=203 Identities=24% Similarity=0.340 Sum_probs=170.9
Q ss_pred eEEEEeEEEEcCCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccce------------ee
Q 005532 424 VVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL------------PN 491 (692)
Q Consensus 424 ~l~~~~l~~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~~------------~~ 491 (692)
||+++||+++|+++.+|+++||+|++|+++||+|+||||||||+++|+|+++|++|+|.++|.++. .+
T Consensus 1 ml~~~~l~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~~i~ 80 (271)
T PRK13638 1 MLATSDLWFRYQDEPVLKGLNLDFSLSPVTGLVGANGCGKSTLFMNLSGLLRPQKGAVLWQGKPLDYSKRGLLALRQQVA 80 (271)
T ss_pred CeEEEEEEEEcCCcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCccEEEECCEEcccccCCHHHHHhheE
Confidence 489999999999888999999999999999999999999999999999999999999999987641 34
Q ss_pred eecccchhhcCCCccHHHHHHHHhcc--cc----HHHHHHHHhhcCCCcccccccCCCCCHHHHHHHHHHHHhccCCcEE
Q 005532 492 YFEQNQAEALDLDKTVLETVAEAAED--WR----IDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLL 565 (692)
Q Consensus 492 ~~~q~~~~~l~~~~tv~e~~~~~~~~--~~----~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~LAral~~~p~lL 565 (692)
|++|+... .....++.+|+...... .. ...+..+++.+++. +..++++.+|||||||||+|||+|+.+|+||
T Consensus 81 ~v~q~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LSgG~~qrl~laraL~~~p~ll 158 (271)
T PRK13638 81 TVFQDPEQ-QIFYTDIDSDIAFSLRNLGVPEAEITRRVDEALTLVDAQ-HFRHQPIQCLSHGQKKRVAIAGALVLQARYL 158 (271)
T ss_pred EEeeChhh-ccccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCH-hHhcCCchhCCHHHHHHHHHHHHHHcCCCEE
Confidence 56654321 12345788887653211 11 23466789999984 5678899999999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhccEEEEEECCEEEEecCChhHHH
Q 005532 566 VLDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYYL 629 (692)
Q Consensus 566 lLDEPTn~LD~~~~~~l~~~l~~~---~~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~~~~ 629 (692)
||||||++||+.++..+.++|.++ +.|||+||||++++..+||++++|++|++.. .|..+++.
T Consensus 159 lLDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~vtH~~~~~~~~~d~i~~l~~G~i~~-~g~~~~~~ 224 (271)
T PRK13638 159 LLDEPTAGLDPAGRTQMIAIIRRIVAQGNHVIISSHDIDLIYEISDAVYVLRQGQILT-HGAPGEVF 224 (271)
T ss_pred EEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEE-eCCHHHHh
Confidence 999999999999999999999875 4599999999999999999999999999985 46665554
No 308
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=2e-39 Score=336.94 Aligned_cols=203 Identities=30% Similarity=0.433 Sum_probs=174.2
Q ss_pred eEEEEeEEEEcCCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccce----------eeee
Q 005532 424 VVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL----------PNYF 493 (692)
Q Consensus 424 ~l~~~~l~~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~~----------~~~~ 493 (692)
+|+++|+++.|+++.+|+++||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|.++. .+|+
T Consensus 2 ~l~~~~l~~~~~~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~G~i~~~g~~~~~~~~~~~~~~i~~~ 81 (258)
T PRK13548 2 MLEARNLSVRLGGRTLLDDVSLTLRPGEVVAILGPNGAGKSTLLRALSGELSPDSGEVRLNGRPLADWSPAELARRRAVL 81 (258)
T ss_pred eEEEEeEEEEeCCeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEEcccCCHHHhhhheEEE
Confidence 589999999999888999999999999999999999999999999999999999999999886531 3466
Q ss_pred cccchhhcCCCccHHHHHHHHhccc------cHHHHHHHHhhcCCCcccccccCCCCCHHHHHHHHHHHHhc------cC
Q 005532 494 EQNQAEALDLDKTVLETVAEAAEDW------RIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMV------KP 561 (692)
Q Consensus 494 ~q~~~~~l~~~~tv~e~~~~~~~~~------~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~LAral~------~~ 561 (692)
+|+. .+.+..|+.+|+....... ....+..+++.+++. ...++.+.+|||||||||+|||||+ .+
T Consensus 82 ~q~~--~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LSgGe~qrv~la~al~~~~~~~~~ 158 (258)
T PRK13548 82 PQHS--SLSFPFTVEEVVAMGRAPHGLSRAEDDALVAAALAQVDLA-HLAGRDYPQLSGGEQQRVQLARVLAQLWEPDGP 158 (258)
T ss_pred ccCC--cCCCCCCHHHHHHhhhcccCCCcHHHHHHHHHHHHHcCCH-hHhcCCcccCCHHHHHHHHHHHHHhcccccCCC
Confidence 6643 3456789999987642211 123577889999995 5678999999999999999999999 59
Q ss_pred CcEEEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEECCEEEEecCChhHHHH
Q 005532 562 STLLVLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYYLE 630 (692)
Q Consensus 562 p~lLlLDEPTn~LD~~~~~~l~~~l~~~----~~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~~~~~ 630 (692)
|+||||||||++||+.+++.+.++|+++ +.|||+||||++++..+||+|++|++|++. ..|..+++..
T Consensus 159 p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~-~~~~~~~~~~ 230 (258)
T PRK13548 159 PRWLLLDEPTSALDLAHQHHVLRLARQLAHERGLAVIVVLHDLNLAARYADRIVLLHQGRLV-ADGTPAEVLT 230 (258)
T ss_pred CCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhcCEEEEEECCEEE-eeCCHHHHhC
Confidence 9999999999999999999999988764 359999999999999999999999999997 4577766643
No 309
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-39 Score=332.08 Aligned_cols=194 Identities=28% Similarity=0.434 Sum_probs=167.0
Q ss_pred ceEEEEeEEEEcCC----eecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccce---------
Q 005532 423 SVVTIKNLEFGYED----RLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL--------- 489 (692)
Q Consensus 423 ~~l~~~~l~~~y~~----~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~~--------- 489 (692)
++|+++||++.|++ +++|+++||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++.
T Consensus 4 ~~l~~~~l~~~~~~~~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~ 83 (233)
T PRK11629 4 ILLQCDNLCKRYQEGSVQTDVLHNVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTSGDVIFNGQPMSKLSSAAKAE 83 (233)
T ss_pred ceEEEEeEEEEcCCCCcceeeEEeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCHHHHHH
Confidence 47999999999974 57999999999999999999999999999999999999999999999986541
Q ss_pred -----eeeecccchhhcCCCccHHHHHHHHhc--c--c--cHHHHHHHHhhcCCCcccccccCCCCCHHHHHHHHHHHHh
Q 005532 490 -----PNYFEQNQAEALDLDKTVLETVAEAAE--D--W--RIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFM 558 (692)
Q Consensus 490 -----~~~~~q~~~~~l~~~~tv~e~~~~~~~--~--~--~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~LAral 558 (692)
.+|++|+ ..+++..|+.+|+..... . . ....+.++++.+|+. +..++++.+|||||||||+|||||
T Consensus 84 ~~~~~i~~v~q~--~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~-~~~~~~~~~LSgG~~qrl~la~al 160 (233)
T PRK11629 84 LRNQKLGFIYQF--HHLLPDFTALENVAMPLLIGKKKPAEINSRALEMLAAVGLE-HRANHRPSELSGGERQRVAIARAL 160 (233)
T ss_pred HHhccEEEEecC--cccCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCc-hhhhCChhhCCHHHHHHHHHHHHH
Confidence 3456664 345667899999875321 1 1 123577899999995 567889999999999999999999
Q ss_pred ccCCcEEEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEECCEEEE
Q 005532 559 VKPSTLLVLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQD 620 (692)
Q Consensus 559 ~~~p~lLlLDEPTn~LD~~~~~~l~~~l~~~----~~tviivSHd~~~l~~~~d~i~~l~~g~l~~ 620 (692)
+.+|+||||||||++||+.+++.+.+.|+++ +.|||+||||++++.. +|++++|++|+++.
T Consensus 161 ~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~sH~~~~~~~-~~~~~~l~~G~i~~ 225 (233)
T PRK11629 161 VNNPRLVLADEPTGNLDARNADSIFQLLGELNRLQGTAFLVVTHDLQLAKR-MSRQLEMRDGRLTA 225 (233)
T ss_pred hcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHh-hCEEEEEECCEEEE
Confidence 9999999999999999999999999999864 4599999999999988 46999999999874
No 310
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=100.00 E-value=7.6e-40 Score=354.60 Aligned_cols=203 Identities=23% Similarity=0.323 Sum_probs=172.5
Q ss_pred EeEEEEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCC----C--------------ce
Q 005532 101 ENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKS----N--------------MK 162 (692)
Q Consensus 101 ~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~----~--------------~~ 162 (692)
.++.+.|+...+|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|. . ..
T Consensus 28 ~~~~~~~g~~~~l~~vsf~i~~Gei~~I~G~nGsGKSTLlr~L~Gl~~p~~G~I~idG~~~~~~i~~~~~~~l~~~r~~~ 107 (382)
T TIGR03415 28 EEILDETGLVVGVANASLDIEEGEICVLMGLSGSGKSSLLRAVNGLNPVSRGSVLVKDGDGSIDVANCDAATLRRLRTHR 107 (382)
T ss_pred HHHHHhhCCEEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEECCEecccccccCCHHHHHHHhcCC
Confidence 45678888889999999999999999999999999999999999999999999999873 1 25
Q ss_pred EEEEcccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHH
Q 005532 163 IAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKL 242 (692)
Q Consensus 163 i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l 242 (692)
|+|++|++.+++..||.||+...+.. . .++......++.++
T Consensus 108 i~~vfQ~~~l~p~~Tv~eNi~~~~~~---------------~------------------------g~~~~~~~~~a~e~ 148 (382)
T TIGR03415 108 VSMVFQKFALMPWLTVEENVAFGLEM---------------Q------------------------GMPEAERRKRVDEQ 148 (382)
T ss_pred EEEEECCCcCCCCCcHHHHHHHHHHh---------------c------------------------CCCHHHHHHHHHHH
Confidence 99999999998889999998532100 0 01111223466788
Q ss_pred hhhcCCCccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc----CCCeEEEEecCHHH
Q 005532 243 MPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVIISHDRAF 318 (692)
Q Consensus 243 l~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~----~~~tvI~vsHd~~~ 318 (692)
++.+|+. ...++++.+|||||||||+|||||+.+|+||||||||++||+.++..+.+.|.+ .++|||+||||+++
T Consensus 149 le~vgL~-~~~~~~~~~LSgGq~QRV~LARALa~~P~ILLlDEPts~LD~~~r~~l~~~L~~l~~~~~~TII~iTHdl~e 227 (382)
T TIGR03415 149 LELVGLA-QWADKKPGELSGGMQQRVGLARAFAMDADILLMDEPFSALDPLIRTQLQDELLELQAKLNKTIIFVSHDLDE 227 (382)
T ss_pred HHHcCCc-hhhcCChhhCCHHHHHHHHHHHHHhcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHH
Confidence 8999996 578899999999999999999999999999999999999999999999887642 48999999999999
Q ss_pred HHhhcCeEEEEecceEEEeccChHHH
Q 005532 319 LDQLCTKIVETEMGVSRTYEGNYSQY 344 (692)
Q Consensus 319 l~~~~d~i~~l~~G~~~~~~G~y~~~ 344 (692)
+.++||+|++|++|++. ..|..++.
T Consensus 228 ~~~l~DrI~vl~~G~iv-~~g~~~ei 252 (382)
T TIGR03415 228 ALKIGNRIAIMEGGRII-QHGTPEEI 252 (382)
T ss_pred HHHhCCEEEEEECCEEE-EecCHHHH
Confidence 99999999999999984 45665443
No 311
>TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc.
Probab=100.00 E-value=1.1e-39 Score=346.38 Aligned_cols=195 Identities=23% Similarity=0.338 Sum_probs=168.9
Q ss_pred EEcCCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccce---------eeeecccchhhcC
Q 005532 432 FGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL---------PNYFEQNQAEALD 502 (692)
Q Consensus 432 ~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~~---------~~~~~q~~~~~l~ 502 (692)
++|+++.+|+++||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++. .+|++|. ..+.
T Consensus 1 k~y~~~~~l~~vs~~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~i~~~~q~--~~~~ 78 (302)
T TIGR01188 1 KVYGDFKAVDGVNFKVREGEVFGFLGPNGAGKTTTIRMLTTLLRPTSGTARVAGYDVVREPRKVRRSIGIVPQY--ASVD 78 (302)
T ss_pred CeeCCeeEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccCHHHHHhhcEEecCC--CCCC
Confidence 3677788999999999999999999999999999999999999999999999986541 4566665 3466
Q ss_pred CCccHHHHHHHHhccc------cHHHHHHHHhhcCCCcccccccCCCCCHHHHHHHHHHHHhccCCcEEEEeCCCCCCCH
Q 005532 503 LDKTVLETVAEAAEDW------RIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDI 576 (692)
Q Consensus 503 ~~~tv~e~~~~~~~~~------~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~LAral~~~p~lLlLDEPTn~LD~ 576 (692)
+..|+.+|+....... ....+.++++.+++. ...++++.+|||||||||+||+||+.+|++|||||||+|||+
T Consensus 79 ~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LSgG~~qrv~la~al~~~p~lllLDEPt~gLD~ 157 (302)
T TIGR01188 79 EDLTGRENLEMMGRLYGLPKDEAEERAEELLELFELG-EAADRPVGTYSGGMRRRLDIAASLIHQPDVLFLDEPTTGLDP 157 (302)
T ss_pred CCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCh-hHhCCchhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCH
Confidence 7889999987543211 123577899999995 567899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhc---CceEEEEecCHHHHHhhccEEEEEECCEEEEecCChhHHHH
Q 005532 577 PSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYYLE 630 (692)
Q Consensus 577 ~~~~~l~~~l~~~---~~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~~~~~ 630 (692)
.+++.+.+.|+++ +.|||++|||++++.++||+|++|++|++.. .|+.+++..
T Consensus 158 ~~~~~l~~~l~~~~~~g~tvi~~sH~~~~~~~~~d~v~~l~~G~i~~-~g~~~~l~~ 213 (302)
T TIGR01188 158 RTRRAIWDYIRALKEEGVTILLTTHYMEEADKLCDRIAIIDHGRIIA-EGTPEELKR 213 (302)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEE-ECCHHHHHH
Confidence 9999999999876 3599999999999999999999999999984 577776644
No 312
>TIGR02982 heterocyst_DevA ABC exporter ATP-binding subunit, DevA family. Members of this protein family are found mostly in the Cyanobacteria, but also in the Planctomycetes. Cyanobacterial examples are involved in heterocyst formation, by which some fraction of members of the colony undergo a developmental change and become capable of nitrogen fixation. The DevBCA proteins are thought export of either heterocyst-specific glycolipids or an enzyme essential for formation of the laminated layer found in heterocysts.
Probab=100.00 E-value=1.4e-39 Score=330.19 Aligned_cols=197 Identities=26% Similarity=0.421 Sum_probs=166.6
Q ss_pred EEEEeEEEEeCC----eeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC-------------
Q 005532 98 VKLENISKSYKG----VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN------------- 160 (692)
Q Consensus 98 l~i~~ls~~y~~----~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~------------- 160 (692)
|+++|+++.|++ .++|+|+||++++|++++|+|+||||||||+++|+|+++|++|+|.++|..
T Consensus 2 l~~~~l~~~~~~~~~~~~il~~vs~~i~~G~~~~I~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (220)
T TIGR02982 2 ISIRNLNHYYGHGSLRKQVLFDINLEINPGEIVILTGPSGSGKTTLLTLIGGLRSVQEGSLKVLGQELYGASEKELVQLR 81 (220)
T ss_pred EEEEEEEEEccCCCcceeEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEhHhcCHhHHHHHH
Confidence 789999999975 579999999999999999999999999999999999999999999998742
Q ss_pred ceEEEEcccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHH
Q 005532 161 MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVS 240 (692)
Q Consensus 161 ~~i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 240 (692)
..|+|++|++.+++..|+.+|+..... .. .....+.....+.
T Consensus 82 ~~i~~~~q~~~~~~~~t~~~n~~~~~~---------------~~-----------------------~~~~~~~~~~~~~ 123 (220)
T TIGR02982 82 RNIGYIFQAHNLLGFLTARQNVQMALE---------------LQ-----------------------PNLSYQEARERAR 123 (220)
T ss_pred hheEEEcCChhhcCCCCHHHHHHHHHH---------------hc-----------------------cCCCHHHHHHHHH
Confidence 259999999988777899999853210 00 0011122334567
Q ss_pred HHhhhcCCCccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc----CCCeEEEEecCH
Q 005532 241 KLMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVIISHDR 316 (692)
Q Consensus 241 ~ll~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~----~~~tvI~vsHd~ 316 (692)
++++.+|+. +..++++.+||||||||++|||||+.+|++|||||||++||+.+++.+.++|++ .++|||+||||+
T Consensus 124 ~~l~~~~l~-~~~~~~~~~lS~G~~qrv~laral~~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sh~~ 202 (220)
T TIGR02982 124 AMLEAVGLG-DHLDYYPHNLSGGQKQRVAIARALVHRPKLVLADEPTAALDSKSGRDVVELMQKLAREQGCTILIVTHDN 202 (220)
T ss_pred HHHHHcCCh-hhhhcChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCH
Confidence 888999985 567888999999999999999999999999999999999999999988877643 489999999999
Q ss_pred HHHHhhcCeEEEEecceE
Q 005532 317 AFLDQLCTKIVETEMGVS 334 (692)
Q Consensus 317 ~~l~~~~d~i~~l~~G~~ 334 (692)
+.. .+||+|+++++|++
T Consensus 203 ~~~-~~~d~v~~l~~g~~ 219 (220)
T TIGR02982 203 RIL-DVADRIVHMEDGKL 219 (220)
T ss_pred HHH-hhCCEEEEEECCEE
Confidence 864 79999999999864
No 313
>TIGR01978 sufC FeS assembly ATPase SufC. SufC is part of the SUF system, shown in E. coli to consist of six proteins and believed to act in Fe-S cluster formation during oxidative stress. SufC forms a complex with SufB and SufD. SufC belongs to the ATP-binding cassette transporter family (pfam00005) but is no longer thought to be part of a transporter. The complex is reported as cytosolic (PubMed:12554644) or associated with the membrane (PubMed:11943156). The SUF system also includes a cysteine desulfurase (SufS, enhanced by SufE) and a probable iron-sulfur cluster assembly scaffold protein, SufA.
Probab=100.00 E-value=1.8e-39 Score=334.30 Aligned_cols=202 Identities=28% Similarity=0.388 Sum_probs=169.9
Q ss_pred EEEEeEEEEcCCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCC--CCCeeEEEECCccce-----------ee
Q 005532 425 VTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLE--KPRGGEVLLGEHNVL-----------PN 491 (692)
Q Consensus 425 l~~~~l~~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~--~p~~G~i~~~~~~~~-----------~~ 491 (692)
|+++||+++|+++.+|+|+||+|++||+++|+||||||||||+++|+|++ +|++|+|.++|.++. .+
T Consensus 1 l~~~~l~~~~~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~~i~ 80 (243)
T TIGR01978 1 LKIKDLHVSVEDKEILKGVNLTVKKGEIHAIMGPNGSGKSTLSKTIAGHPSYEVTSGTILFKGQDLLELEPDERARAGLF 80 (243)
T ss_pred CeEeeEEEEECCEEEEeccceEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCcceEEECCEecCCCCHHHhhccceE
Confidence 47899999999889999999999999999999999999999999999995 799999999986531 23
Q ss_pred eecccchhhcCCCccHHHHHHHHhcc---------cc----HHHHHHHHhhcCCCcccccccCC-CCCHHHHHHHHHHHH
Q 005532 492 YFEQNQAEALDLDKTVLETVAEAAED---------WR----IDDIKGLLGRCNFKADMLDRKVS-LLSGGEKARLAFCKF 557 (692)
Q Consensus 492 ~~~q~~~~~l~~~~tv~e~~~~~~~~---------~~----~~~~~~~L~~~~l~~~~~~~~~~-~LSgGqkqrv~LAra 557 (692)
|++|+ ..+.+..|+.+++...... .. ...+..+++.+++.....++++. .|||||||||+|||+
T Consensus 81 ~v~q~--~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~LS~G~~qrl~la~a 158 (243)
T TIGR01978 81 LAFQY--PEEIPGVSNLEFLRSALNARRSARGEEPLDLLDFLKLLKAKLALLGMDEEFLNRSVNEGFSGGEKKRNEILQM 158 (243)
T ss_pred eeecc--ccccCCcCHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHcCCchhhcccccccCcCHHHHHHHHHHHH
Confidence 44554 3456678999987643210 01 23467889999996445677887 599999999999999
Q ss_pred hccCCcEEEEeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhh-ccEEEEEECCEEEEecCChhHHH
Q 005532 558 MVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQI-VNRVVEVKGSNLQDYAGDYNYYL 629 (692)
Q Consensus 558 l~~~p~lLlLDEPTn~LD~~~~~~l~~~l~~~---~~tviivSHd~~~l~~~-~d~i~~l~~g~l~~~~g~~~~~~ 629 (692)
|+.+|++|||||||++||+.+++.+.+.|+++ +.|||+||||++++..+ ||++++|++|++. +.|+.+.+.
T Consensus 159 l~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~vsH~~~~~~~~~~d~i~~l~~G~i~-~~g~~~~~~ 233 (243)
T TIGR01978 159 ALLEPKLAILDEIDSGLDIDALKIVAEGINRLREPDRSFLIITHYQRLLNYIKPDYVHVLLDGRIV-KSGDVELAK 233 (243)
T ss_pred HhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCcEEEEEEecHHHHHhhcCCeEEEEeCCEEE-EecCHHHhc
Confidence 99999999999999999999999999999876 35999999999999998 8999999999997 457766553
No 314
>PRK09580 sufC cysteine desulfurase ATPase component; Reviewed
Probab=100.00 E-value=1.8e-39 Score=335.40 Aligned_cols=213 Identities=22% Similarity=0.291 Sum_probs=169.0
Q ss_pred cEEEEeEEEEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCC--CCCccEEEECCCC-----------ceE
Q 005532 97 GVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQE--EPDSGNVIKAKSN-----------MKI 163 (692)
Q Consensus 97 ~l~i~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~--~p~~G~I~~~~~~-----------~~i 163 (692)
+|+++|+++.|+++++|+|+||+|++|++++|+|+||||||||+++|+|++ +|++|+|.++|.+ ..|
T Consensus 1 ~i~~~nl~~~~~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~~i 80 (248)
T PRK09580 1 MLSIKDLHVSVEDKAILRGLNLEVRPGEVHAIMGPNGSGKSTLSATLAGREDYEVTGGTVEFKGKDLLELSPEDRAGEGI 80 (248)
T ss_pred CeEEEEEEEEeCCeeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCccCCCCceEEEECCCccccCCHHHHhhcce
Confidence 388999999999888999999999999999999999999999999999995 6999999998743 249
Q ss_pred EEEcccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHHh
Q 005532 164 AFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLM 243 (692)
Q Consensus 164 ~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll 243 (692)
+|++|++.+++..|+.+++...... + ... ......+.+.+...+.+++
T Consensus 81 ~~~~q~~~~~~~~~~~~~~~~~~~~----------~----~~~------------------~~~~~~~~~~~~~~~~~~l 128 (248)
T PRK09580 81 FMAFQYPVEIPGVSNQFFLQTALNA----------V----RSY------------------RGQEPLDRFDFQDLMEEKI 128 (248)
T ss_pred EEEecCchhccchhHHHHHHHhhhh----------h----hcc------------------cccccchHHHHHHHHHHHH
Confidence 9999998766655654443211000 0 000 0000011122345666788
Q ss_pred hhcCCCccccccccc-cCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHc---cCCCeEEEEecCHHHH
Q 005532 244 PELGFTADDGDRLVA-SFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG---KQDVPMVIISHDRAFL 319 (692)
Q Consensus 244 ~~lgl~~~~~~~~~~-~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~---~~~~tvI~vsHd~~~l 319 (692)
+.++++....++++. +|||||||||+|||||+.+|+||||||||++||+.+++++.++|+ +.++|||+||||++++
T Consensus 129 ~~~~l~~~~~~~~~~~~LS~G~~qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~l~~~~~tiii~sH~~~~~ 208 (248)
T PRK09580 129 ALLKMPEDLLTRSVNVGFSGGEKKRNDILQMAVLEPELCILDESDSGLDIDALKIVADGVNSLRDGKRSFIIVTHYQRIL 208 (248)
T ss_pred HHcCCChhhcccCCCCCCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHH
Confidence 888886455667675 899999999999999999999999999999999999999988654 4578999999999999
Q ss_pred Hhh-cCeEEEEecceEEEeccChH
Q 005532 320 DQL-CTKIVETEMGVSRTYEGNYS 342 (692)
Q Consensus 320 ~~~-~d~i~~l~~G~~~~~~G~y~ 342 (692)
..+ ||+|+++++|++ .+.|+++
T Consensus 209 ~~~~~d~i~~l~~g~i-~~~g~~~ 231 (248)
T PRK09580 209 DYIKPDYVHVLYQGRI-VKSGDFT 231 (248)
T ss_pred HhhhCCEEEEEECCeE-EEeCCHH
Confidence 987 899999999998 4678764
No 315
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.4e-39 Score=338.36 Aligned_cols=196 Identities=20% Similarity=0.315 Sum_probs=160.8
Q ss_pred CCcEEEEeEEEEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCC-----CCccEEEECCCC---------
Q 005532 95 SSGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEE-----PDSGNVIKAKSN--------- 160 (692)
Q Consensus 95 ~~~l~i~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~-----p~~G~I~~~~~~--------- 160 (692)
..+|+++|++++|+++++|+|+||+|++|++++|+||||||||||+++|+|+++ |++|+|.++|.+
T Consensus 11 ~~~l~i~nl~~~~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~v~~~g~~i~~~~~~~~ 90 (269)
T PRK14259 11 NIIISLQNVTISYGTFEAVKNVFCDIPRGKVTALIGPSGCGKSTVLRSLNRMNDLIEGCSLKGRVLFDGTDLYDPRVDPV 90 (269)
T ss_pred CceEEEEeEEEEECCEEEEcceEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEcccccCCHH
Confidence 346999999999998889999999999999999999999999999999999987 689999998742
Q ss_pred ---ceEEEEcccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHH
Q 005532 161 ---MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDA 237 (692)
Q Consensus 161 ---~~i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (692)
..|+|++|++.++. .||.||+...... .. .. ...++
T Consensus 91 ~~~~~i~~v~q~~~l~~-~tv~enl~~~~~~---------------~~------------------------~~-~~~~~ 129 (269)
T PRK14259 91 EVRRRIGMVFQQPNPFP-KSIYENIAFGARI---------------NG------------------------YT-GDMDE 129 (269)
T ss_pred HHhhceEEEccCCccch-hhHHHHHhhhhhh---------------cC------------------------Cc-HHHHH
Confidence 25999999988766 5999998532100 00 00 00112
Q ss_pred HHHHHhhhcCCC---ccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc--CCCeEEEE
Q 005532 238 KVSKLMPELGFT---ADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVII 312 (692)
Q Consensus 238 ~i~~ll~~lgl~---~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~--~~~tvI~v 312 (692)
++.++++.+++. ....++++.+|||||||||+|||||+.+|+||||||||++||+.+++++.++|++ .+.|||+|
T Consensus 130 ~~~~~l~~~~l~~~l~~~~~~~~~~LS~G~~qrl~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~~tiiiv 209 (269)
T PRK14259 130 LVERSLRKAAVWDECKDKLNESGYSLSGGQQQRLCIARTIAIEPEVILMDEPCSALDPISTLKIEETMHELKKNFTIVIV 209 (269)
T ss_pred HHHHHHHHhCCcchhhhhhCCCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEE
Confidence 233445555542 1345778899999999999999999999999999999999999999999888753 36899999
Q ss_pred ecCHHHHHhhcCeEEEEec
Q 005532 313 SHDRAFLDQLCTKIVETEM 331 (692)
Q Consensus 313 sHd~~~l~~~~d~i~~l~~ 331 (692)
|||++++..+||++++|++
T Consensus 210 tH~~~~~~~~~d~i~~l~~ 228 (269)
T PRK14259 210 THNMQQAVRVSDMTAFFNA 228 (269)
T ss_pred eCCHHHHHHhcCEEEEEec
Confidence 9999999999999999997
No 316
>cd03267 ABC_NatA_like Similar in sequence to NatA, this is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled to proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilis, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of the single ATP-binding protein and the single intergral membrane protein.
Probab=100.00 E-value=9.8e-40 Score=334.91 Aligned_cols=191 Identities=28% Similarity=0.446 Sum_probs=159.2
Q ss_pred EEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC---------ceEEEEc-ccCccCC
Q 005532 105 KSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN---------MKIAFLS-QEFEVSM 174 (692)
Q Consensus 105 ~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~---------~~i~~v~-Q~~~~~~ 174 (692)
+.|+.+++|+|+||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|.. ..++|++ |.+.+++
T Consensus 29 ~~~~~~~il~~vs~~i~~Ge~~~i~G~NGsGKSTLl~~i~Gl~~p~~G~i~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~ 108 (236)
T cd03267 29 RKYREVEALKGISFTIEKGEIVGFIGPNGAGKTTTLKILSGLLQPTSGEVRVAGLVPWKRRKKFLRRIGVVFGQKTQLWW 108 (236)
T ss_pred cccCCeeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEccccchhhcccEEEEcCCccccCC
Confidence 55677789999999999999999999999999999999999999999999998642 2589997 5566667
Q ss_pred CCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHHhhhcCCCccccc
Q 005532 175 SRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFTADDGD 254 (692)
Q Consensus 175 ~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl~~~~~~ 254 (692)
..|+.+|+..... +. .........++..+++.+|+. +..+
T Consensus 109 ~~tv~e~l~~~~~---------------~~------------------------~~~~~~~~~~~~~~l~~~gl~-~~~~ 148 (236)
T cd03267 109 DLPVIDSFYLLAA---------------IY------------------------DLPPARFKKRLDELSELLDLE-ELLD 148 (236)
T ss_pred CCcHHHHHHHHHH---------------Hc------------------------CCCHHHHHHHHHHHHHHcCCh-hHhc
Confidence 8899998742100 00 001111233456677888886 4678
Q ss_pred cccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc----CCCeEEEEecCHHHHHhhcCeEEEEe
Q 005532 255 RLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVIISHDRAFLDQLCTKIVETE 330 (692)
Q Consensus 255 ~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~----~~~tvI~vsHd~~~l~~~~d~i~~l~ 330 (692)
+++.+||||||||++|||||+.+|+||||||||++||+.+++++.++|++ .+.|||+|||+++++..+||+|+++.
T Consensus 149 ~~~~~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~ 228 (236)
T cd03267 149 TPVRQLSLGQRMRAEIAAALLHEPEILFLDEPTIGLDVVAQENIRNFLKEYNRERGTTVLLTSHYMKDIEALARRVLVID 228 (236)
T ss_pred CChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhcCCCEEEEEecCHHHHHHhCCEEEEEe
Confidence 88999999999999999999999999999999999999999999988753 37899999999999999999999999
Q ss_pred cceEE
Q 005532 331 MGVSR 335 (692)
Q Consensus 331 ~G~~~ 335 (692)
+|++.
T Consensus 229 ~G~i~ 233 (236)
T cd03267 229 KGRLL 233 (236)
T ss_pred CCEEE
Confidence 99873
No 317
>TIGR02142 modC_ABC molybdenum ABC transporter, ATP-binding protein. This model represents the ATP-binding cassette (ABC) protein of the three subunit molybdate ABC transporter. The three proteins of this complex are homologous to proteins of the sulfate ABC transporter. Molybdenum may be used in nitrogenases of nitrogen-fixing bacteria and in molybdopterin cofactors. In some cases, molybdate may be transported by a sulfate transporter rather than by a specific molybdate transporter.
Probab=100.00 E-value=1.7e-39 Score=351.84 Aligned_cols=195 Identities=26% Similarity=0.395 Sum_probs=166.5
Q ss_pred eEEEEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC--------------ceEEEEc
Q 005532 102 NISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN--------------MKIAFLS 167 (692)
Q Consensus 102 ~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~--------------~~i~~v~ 167 (692)
|++++|++..+ ++||+|++|++++|+|||||||||||++|+|+++|++|+|.++|.. ..|+|++
T Consensus 4 ~l~~~~~~~~~--~isl~i~~Gei~~l~G~nGsGKSTLl~~iaGl~~p~~G~I~~~g~~i~~~~~~~~~~~~~~~i~~v~ 81 (354)
T TIGR02142 4 RFSKRLGDFSL--DADFTLPGQGVTAIFGRSGSGKTTLIRLIAGLTRPDEGEIVLNGRTLFDSRKGIFLPPEKRRIGYVF 81 (354)
T ss_pred EEEEEECCEEE--EEEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECccCccccccchhhCCeEEEe
Confidence 89999987664 8999999999999999999999999999999999999999987632 2499999
Q ss_pred ccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHHhhhcC
Q 005532 168 QEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELG 247 (692)
Q Consensus 168 Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lg 247 (692)
|++.+++..||++|+...+.. ........++.++++.+|
T Consensus 82 q~~~l~~~~tv~enl~~~~~~-----------------------------------------~~~~~~~~~~~~~l~~~g 120 (354)
T TIGR02142 82 QEARLFPHLSVRGNLRYGMKR-----------------------------------------ARPSERRISFERVIELLG 120 (354)
T ss_pred cCCccCCCCcHHHHHHHHhhc-----------------------------------------cChhHHHHHHHHHHHHcC
Confidence 999888889999998532110 000112345667888899
Q ss_pred CCccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc----CCCeEEEEecCHHHHHhhc
Q 005532 248 FTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVIISHDRAFLDQLC 323 (692)
Q Consensus 248 l~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~----~~~tvI~vsHd~~~l~~~~ 323 (692)
+. ...++++.+|||||||||+|||||+.+|++|||||||++||+.+++.+.++|++ .+.|||+||||++++..+|
T Consensus 121 L~-~~~~~~~~~LSgGqkqRvalAraL~~~p~lllLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiiivtH~~~~~~~~~ 199 (354)
T TIGR02142 121 IG-HLLGRLPGRLSGGEKQRVAIGRALLSSPRLLLMDEPLAALDDPRKYEILPYLERLHAEFGIPILYVSHSLQEVLRLA 199 (354)
T ss_pred Ch-hHhcCChhhCCHHHHHHHHHHHHHHcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhC
Confidence 96 578899999999999999999999999999999999999999999998887643 4889999999999999999
Q ss_pred CeEEEEecceEEEeccCh
Q 005532 324 TKIVETEMGVSRTYEGNY 341 (692)
Q Consensus 324 d~i~~l~~G~~~~~~G~y 341 (692)
|+|++|++|++. ..|..
T Consensus 200 d~i~~l~~G~i~-~~g~~ 216 (354)
T TIGR02142 200 DRVVVLEDGRVA-AAGPI 216 (354)
T ss_pred CEEEEEeCCEEE-EECCH
Confidence 999999999984 55654
No 318
>PRK14238 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.9e-39 Score=339.55 Aligned_cols=210 Identities=20% Similarity=0.287 Sum_probs=166.6
Q ss_pred CCcEEEEeEEEEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCC-----CCccEEEECCCC---------
Q 005532 95 SSGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEE-----PDSGNVIKAKSN--------- 160 (692)
Q Consensus 95 ~~~l~i~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~-----p~~G~I~~~~~~--------- 160 (692)
.++|+++|++++|+++++|+|+||+|++|++++|+|+||||||||+++|+|+++ |++|+|.++|.+
T Consensus 22 ~~~l~~~~l~~~~~~~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~ 101 (271)
T PRK14238 22 KVVFDTQNLNLWYGEDHALKNINLDIHENEVTAIIGPSGCGKSTYIKTLNRMVELVPSVKTTGKILYRDQNIFDKSYSVE 101 (271)
T ss_pred ceEEEEeeeEEEECCcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceeEEECCEEcccccccHH
Confidence 346999999999998889999999999999999999999999999999999987 699999998732
Q ss_pred ---ceEEEEcccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHH
Q 005532 161 ---MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDA 237 (692)
Q Consensus 161 ---~~i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (692)
..|+|++|++.++. .|+.+|+...... ... . +....+.
T Consensus 102 ~~~~~i~~v~q~~~~~~-~tv~eni~~~~~~---------------~~~-~----------------------~~~~~~~ 142 (271)
T PRK14238 102 ELRTNVGMVFQKPNPFP-KSIYDNVTYGPKI---------------HGI-K----------------------DKKTLDE 142 (271)
T ss_pred HHhhhEEEEecCCcccc-ccHHHHHHHHHHh---------------cCC-C----------------------cHHHHHH
Confidence 25999999988765 5999998532110 000 0 0000112
Q ss_pred HHHHHhhhcCCC---ccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc--CCCeEEEE
Q 005532 238 KVSKLMPELGFT---ADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVII 312 (692)
Q Consensus 238 ~i~~ll~~lgl~---~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~--~~~tvI~v 312 (692)
.+.++++.+++. ....++++.+|||||||||+|||||+.+|+||||||||++||+.++.++.++|++ .+.|||+|
T Consensus 143 ~~~~~l~~~~~~~~l~~~~~~~~~~LSgGe~qrv~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiiiv 222 (271)
T PRK14238 143 IVEKSLRGAAIWDELKDRLHDNAYGLSGGQQQRLCIARCLAIEPDVILMDEPTSALDPISTLKVEELVQELKKDYSIIIV 222 (271)
T ss_pred HHHHHHHHcCCcchHHHHHhcCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHcCCEEEEE
Confidence 223333333221 1245678899999999999999999999999999999999999999999887753 36899999
Q ss_pred ecCHHHHHhhcCeEEEEecceEEEeccChHHH
Q 005532 313 SHDRAFLDQLCTKIVETEMGVSRTYEGNYSQY 344 (692)
Q Consensus 313 sHd~~~l~~~~d~i~~l~~G~~~~~~G~y~~~ 344 (692)
|||++++..+||+|+++++|++. +.|...++
T Consensus 223 sH~~~~i~~~~d~i~~l~~G~i~-~~g~~~~~ 253 (271)
T PRK14238 223 THNMQQAARISDKTAFFLNGYVN-EYDDTDKI 253 (271)
T ss_pred EcCHHHHHHhCCEEEEEECCEEE-EeCCHHHH
Confidence 99999999999999999999984 45665443
No 319
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.8e-39 Score=336.82 Aligned_cols=203 Identities=29% Similarity=0.447 Sum_probs=174.5
Q ss_pred eEEEEeEEEEcCCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccce----------eeee
Q 005532 424 VVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL----------PNYF 493 (692)
Q Consensus 424 ~l~~~~l~~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~~----------~~~~ 493 (692)
+|+++|++++|+++.+|+++||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|.++. .+|+
T Consensus 2 ~l~~~~l~~~~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~~~ 81 (255)
T PRK11231 2 TLRTENLTVGYGTKRILNDLSLSLPTGKITALIGPNGCGKSTLLKCFARLLTPQSGTVFLGDKPISMLSSRQLARRLALL 81 (255)
T ss_pred EEEEEeEEEEECCEEEEeeeeeEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCcEEEECCEEhHHCCHHHHhhheEEe
Confidence 589999999999889999999999999999999999999999999999999999999999886531 3566
Q ss_pred cccchhhcCCCccHHHHHHHHhc----------cccHHHHHHHHhhcCCCcccccccCCCCCHHHHHHHHHHHHhccCCc
Q 005532 494 EQNQAEALDLDKTVLETVAEAAE----------DWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPST 563 (692)
Q Consensus 494 ~q~~~~~l~~~~tv~e~~~~~~~----------~~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~LAral~~~p~ 563 (692)
+|+. .+.+..|+.+|+..... ......+..+++.+++. ...++++.+|||||+|||+|||||+.+|+
T Consensus 82 ~q~~--~~~~~~tv~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LS~G~~qrv~laral~~~p~ 158 (255)
T PRK11231 82 PQHH--LTPEGITVRELVAYGRSPWLSLWGRLSAEDNARVNQAMEQTRIN-HLADRRLTDLSGGQRQRAFLAMVLAQDTP 158 (255)
T ss_pred cccC--CCCCCccHHHHHHhccchhhhhccCCCHHHHHHHHHHHHHcCCH-HHHcCCcccCCHHHHHHHHHHHHHhcCCC
Confidence 6653 34566799999875311 01123567889999994 56789999999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhccEEEEEECCEEEEecCChhHHHH
Q 005532 564 LLVLDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYYLE 630 (692)
Q Consensus 564 lLlLDEPTn~LD~~~~~~l~~~l~~~---~~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~~~~~ 630 (692)
+|||||||++||+.+++.+.+.|.++ +.|||+||||++++.++||++++|++|++. ..|.++++..
T Consensus 159 llllDEP~~~LD~~~~~~l~~~l~~l~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~-~~~~~~~~~~ 227 (255)
T PRK11231 159 VVLLDEPTTYLDINHQVELMRLMRELNTQGKTVVTVLHDLNQASRYCDHLVVLANGHVM-AQGTPEEVMT 227 (255)
T ss_pred EEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHhcCEEEEEECCeEE-EEcCHHHhcC
Confidence 99999999999999999999999765 459999999999999999999999999997 4577766643
No 320
>cd03231 ABC_CcmA_heme_exporter CcmA, the ATP-binding component of the bacterial CcmAB transporter. The CCM family is involved in bacterial cytochrome c biogenesis. Cytochrome c maturation in E. coli requires the ccm operon, which encodes eight membrane proteins (CcmABCDEFGH). CcmE is a periplasmic heme chaperone that binds heme covalently and transfers it onto apocytochrome c in the presence of CcmF, CcmG, and CcmH. The CcmAB proteins represent an ABC transporter and the CcmCD proteins participate in heme transfer to CcmE.
Probab=100.00 E-value=8.9e-40 Score=327.08 Aligned_cols=186 Identities=25% Similarity=0.401 Sum_probs=161.9
Q ss_pred EEEEeEEEEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC---------ceEEEEcc
Q 005532 98 VKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN---------MKIAFLSQ 168 (692)
Q Consensus 98 l~i~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~---------~~i~~v~Q 168 (692)
|+++|+++.|+++++|+|+||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|.. ..++|++|
T Consensus 1 l~i~~l~~~~~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~i~~~~q 80 (201)
T cd03231 1 LEADELTCERDGRALFSGLSFTLAAGEALQVTGPNGSGKTTLLRILAGLSPPLAGRVLLNGGPLDFQRDSIARGLLYLGH 80 (201)
T ss_pred CEEEEEEEEeCCceeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccccHHhhhheEEecc
Confidence 468999999998899999999999999999999999999999999999999999999998643 25999999
Q ss_pred cCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHHhhhcCC
Q 005532 169 EFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGF 248 (692)
Q Consensus 169 ~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl 248 (692)
++.+++..|+++|+...... ..++++.++++.+|+
T Consensus 81 ~~~~~~~~tv~e~l~~~~~~---------------------------------------------~~~~~~~~~l~~~~l 115 (201)
T cd03231 81 APGIKTTLSVLENLRFWHAD---------------------------------------------HSDEQVEEALARVGL 115 (201)
T ss_pred ccccCCCcCHHHHHHhhccc---------------------------------------------ccHHHHHHHHHHcCC
Confidence 98887789999997421000 012345567778888
Q ss_pred CccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc---CCCeEEEEecCHHHHHhhcCe
Q 005532 249 TADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK---QDVPMVIISHDRAFLDQLCTK 325 (692)
Q Consensus 249 ~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~---~~~tvI~vsHd~~~l~~~~d~ 325 (692)
. ...++++.+||||||||++|||||+.+|++|||||||++||+.+++++.++|++ .+.|+|+||||...+..+|++
T Consensus 116 ~-~~~~~~~~~LS~G~~qrl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~~~~~~~~~ 194 (201)
T cd03231 116 N-GFEDRPVAQLSAGQQRRVALARLLLSGRPLWILDEPTTALDKAGVARFAEAMAGHCARGGMVVLTTHQDLGLSEAGAR 194 (201)
T ss_pred h-hhhcCchhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCchhhhhccce
Confidence 6 456788999999999999999999999999999999999999999999988753 488999999999999999999
Q ss_pred EEEE
Q 005532 326 IVET 329 (692)
Q Consensus 326 i~~l 329 (692)
++.+
T Consensus 195 ~~~~ 198 (201)
T cd03231 195 ELDL 198 (201)
T ss_pred eEec
Confidence 9876
No 321
>PRK09984 phosphonate/organophosphate ester transporter subunit; Provisional
Probab=100.00 E-value=2.1e-39 Score=337.64 Aligned_cols=202 Identities=25% Similarity=0.413 Sum_probs=174.9
Q ss_pred ceEEEEeEEEEcCCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCC---eeEEEECCccce----------
Q 005532 423 SVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPR---GGEVLLGEHNVL---------- 489 (692)
Q Consensus 423 ~~l~~~~l~~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~---~G~i~~~~~~~~---------- 489 (692)
++|+++||++.|+++.+|+++||+|.+||+++|+|+||||||||+++|+|+++|+ +|+|.++|.++.
T Consensus 3 ~~l~~~nl~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~~~~G~i~~~g~~~~~~~~~~~~~~ 82 (262)
T PRK09984 3 TIIRVEKLAKTFNQHQALHAVDLNIHHGEMVALLGPSGSGKSTLLRHLSGLITGDKSAGSHIELLGRTVQREGRLARDIR 82 (262)
T ss_pred cEEEEeeEEEEeCCeEEEecceEEEcCCcEEEEECCCCCCHHHHHHHHhccCCCCCCCceEEEECCEecccccccchhHH
Confidence 4799999999999889999999999999999999999999999999999999986 499999986542
Q ss_pred -----eeeecccchhhcCCCccHHHHHHHHhc--------------cccHHHHHHHHhhcCCCcccccccCCCCCHHHHH
Q 005532 490 -----PNYFEQNQAEALDLDKTVLETVAEAAE--------------DWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKA 550 (692)
Q Consensus 490 -----~~~~~q~~~~~l~~~~tv~e~~~~~~~--------------~~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkq 550 (692)
.+|++|+ ..+.+..|+.+|+..... ......+.++++.+|+. ...++++.+|||||||
T Consensus 83 ~~~~~i~~~~q~--~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LS~G~~q 159 (262)
T PRK09984 83 KSRANTGYIFQQ--FNLVNRLSVLENVLIGALGSTPFWRTCFSWFTREQKQRALQALTRVGMV-HFAHQRVSTLSGGQQQ 159 (262)
T ss_pred HHHhheEEEccc--cccccCCcHHHHHHhhhcccccchhhhcccccHHHHHHHHHHHHHcCCH-HHHhCCccccCHHHHH
Confidence 2455654 345667899999875321 01123578899999995 5678999999999999
Q ss_pred HHHHHHHhccCCcEEEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEECCEEEEecCChh
Q 005532 551 RLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYN 626 (692)
Q Consensus 551 rv~LAral~~~p~lLlLDEPTn~LD~~~~~~l~~~l~~~----~~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~ 626 (692)
||+|||||+.+|+||||||||++||+.+++.+.+.|+++ +.|||+||||++++..+||+|++|++|++. +.|+++
T Consensus 160 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~tH~~~~~~~~~d~i~~l~~g~i~-~~g~~~ 238 (262)
T PRK09984 160 RVAIARALMQQAKVILADEPIASLDPESARIVMDTLRDINQNDGITVVVTLHQVDYALRYCERIVALRQGHVF-YDGSSQ 238 (262)
T ss_pred HHHHHHHHhcCCCEEEecCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEE-EeCCHH
Confidence 999999999999999999999999999999999999865 359999999999999999999999999996 568887
Q ss_pred HH
Q 005532 627 YY 628 (692)
Q Consensus 627 ~~ 628 (692)
++
T Consensus 239 ~~ 240 (262)
T PRK09984 239 QF 240 (262)
T ss_pred Hh
Confidence 76
No 322
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of a conserved four gene ABC transporter operon found next to ectoine unilization operons and ectoine biosynthesis operons. Ectoine is a compatible solute that protects enzymes from high osmolarity. It is released by some species in response to hypoosmotic shock, and it is taken up by a number of bacteria as a compatible solute or for consumption. This family shows strong sequence similiarity to a number of amino acid ABC transporter ATP-binding proteins.
Probab=100.00 E-value=2e-39 Score=335.83 Aligned_cols=202 Identities=25% Similarity=0.357 Sum_probs=173.2
Q ss_pred EEEEeEEEEcCCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccce---------------
Q 005532 425 VTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL--------------- 489 (692)
Q Consensus 425 l~~~~l~~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~~--------------- 489 (692)
|+++||++.|+++.+|+++||+|++||++||+|+||||||||+++|+|+++|++|+|.++|.++.
T Consensus 1 i~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~~~ 80 (252)
T TIGR03005 1 VRFSDVTKRFGILTVLDGLNFSVAAGEKVALIGPSGSGKSTILRILMTLEPIDEGQIQVEGEQLYHMPGRNGPLVPADEK 80 (252)
T ss_pred CEEEEEEEEeCCeeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccccccccchh
Confidence 47899999999888999999999999999999999999999999999999999999999886541
Q ss_pred --------eeeecccchhhcCCCccHHHHHHHHhc----cc---cHHHHHHHHhhcCCCcccccccCCCCCHHHHHHHHH
Q 005532 490 --------PNYFEQNQAEALDLDKTVLETVAEAAE----DW---RIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAF 554 (692)
Q Consensus 490 --------~~~~~q~~~~~l~~~~tv~e~~~~~~~----~~---~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~L 554 (692)
.+|++|+ ..+.+..|+.+|+..... .. ....+.++++.+|+. ...++.+.+|||||+||++|
T Consensus 81 ~~~~~~~~i~~v~q~--~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~-~~~~~~~~~LS~G~~qrv~l 157 (252)
T TIGR03005 81 HLRQMRNKIGMVFQS--FNLFPHKTVLDNVTEAPVLVLGMARAEAEKRAMELLDMVGLA-DKADHMPAQLSGGQQQRVAI 157 (252)
T ss_pred HHHHHhhCeEEEecC--cccCCCCcHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCh-hHhhcChhhcCHHHHHHHHH
Confidence 2345554 346667899999875321 01 123577889999995 56788999999999999999
Q ss_pred HHHhccCCcEEEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEECCEEEEecCChhHHHH
Q 005532 555 CKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYYLE 630 (692)
Q Consensus 555 Aral~~~p~lLlLDEPTn~LD~~~~~~l~~~l~~~----~~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~~~~~ 630 (692)
||||+.+|++|||||||++||+.++..+.+.|+++ +.|||+||||++++..+||++++|++|+++. .|+++++..
T Consensus 158 aral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~-~g~~~~~~~ 236 (252)
T TIGR03005 158 ARALAMRPKVMLFDEVTSALDPELVGEVLNVIRRLASEHDLTMLLVTHEMGFAREFADRVCFFDKGRIVE-QGKPDEIFR 236 (252)
T ss_pred HHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhcCEEEEEECCEEEE-eCCHHHHhc
Confidence 99999999999999999999999999999998764 4599999999999999999999999999974 577776644
No 323
>PRK14275 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3e-39 Score=340.38 Aligned_cols=210 Identities=21% Similarity=0.284 Sum_probs=168.6
Q ss_pred CCCcEEEEeEEEEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCC-----CCccEEEECCCC--------
Q 005532 94 ISSGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEE-----PDSGNVIKAKSN-------- 160 (692)
Q Consensus 94 ~~~~l~i~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~-----p~~G~I~~~~~~-------- 160 (692)
..+.|+++|++++|++.++|+|+||+|++|++++|+|+||||||||+++|+|+.+ |++|+|.++|..
T Consensus 36 ~~~~l~~~~l~~~~~~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~~~p~~~~~G~I~~~g~~i~~~~~~~ 115 (286)
T PRK14275 36 GKPHVVAKNFSIYYGEFEAVKKVNADILSKYVTAIIGPSGCGKSTFLRAINRMNDLIPSCHTTGALMFDGEDIYGKFTDE 115 (286)
T ss_pred CceEEEEeeeEEEECCEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCCceEEEECCEEhhhcccch
Confidence 3457999999999988889999999999999999999999999999999999864 499999997632
Q ss_pred ----ceEEEEcccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHH
Q 005532 161 ----MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLD 236 (692)
Q Consensus 161 ----~~i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (692)
..|+|++|++.++. .||.||+..... . ... .+.....
T Consensus 116 ~~~~~~i~~v~q~~~l~~-~tv~enl~~~~~--~-------------~~~-----------------------~~~~~~~ 156 (286)
T PRK14275 116 VLLRKKIGMVFQKPNPFP-KSIFDNIAYGPR--L-------------HGI-----------------------NDKKQLE 156 (286)
T ss_pred HHhhhcEEEECCCCCCCc-cCHHHHHHhHHH--h-------------cCC-----------------------CcHHHHH
Confidence 25999999988765 599999853210 0 000 0000112
Q ss_pred HHHHHHhhhcCCC---ccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc--CCCeEEE
Q 005532 237 AKVSKLMPELGFT---ADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVI 311 (692)
Q Consensus 237 ~~i~~ll~~lgl~---~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~--~~~tvI~ 311 (692)
.++.++++.+|+. .+..++++.+|||||||||+|||||+.+|+||||||||++||+.+++++.++|++ .+.|||+
T Consensus 157 ~~~~~~l~~~~l~~~l~~~~~~~~~~LSgGq~qrv~LAraL~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~~~tvIi 236 (286)
T PRK14275 157 EIVEKSLRKAALWDEVSDRLDKNALGLSGGQQQRLCVARTLAVEPEILLLDEPTSALDPKATAKIEDLIQELRGSYTIMI 236 (286)
T ss_pred HHHHHHHHHhCCccchhhHhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEE
Confidence 3344555566652 1345778999999999999999999999999999999999999999999888754 3579999
Q ss_pred EecCHHHHHhhcCeEEEEecceEEEeccChHH
Q 005532 312 ISHDRAFLDQLCTKIVETEMGVSRTYEGNYSQ 343 (692)
Q Consensus 312 vsHd~~~l~~~~d~i~~l~~G~~~~~~G~y~~ 343 (692)
||||++++..+||+|++|++|++. +.|...+
T Consensus 237 vsH~~~~~~~~~d~i~~L~~G~i~-~~g~~~~ 267 (286)
T PRK14275 237 VTHNMQQASRVSDYTMFFYEGVLV-EHAPTAQ 267 (286)
T ss_pred EeCCHHHHHHhCCEEEEEECCEEE-EeCCHHH
Confidence 999999999999999999999984 5565433
No 324
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2e-39 Score=326.87 Aligned_cols=191 Identities=32% Similarity=0.484 Sum_probs=165.6
Q ss_pred EEEEeEEEEcCCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccce--------eeeeccc
Q 005532 425 VTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL--------PNYFEQN 496 (692)
Q Consensus 425 l~~~~l~~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~~--------~~~~~q~ 496 (692)
|+++|++++|+++.+ ++||+|.+||+++|+||||||||||+++|+|+++|++|+|.++|.++. .+|++|+
T Consensus 1 i~~~~l~~~~~~~~~--~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~gl~~~~~G~i~~~g~~~~~~~~~~~~i~~~~q~ 78 (211)
T cd03298 1 VRLDKIRFSYGEQPM--HFDLTFAQGEITAIVGPSGSGKSTLLNLIAGFETPQSGRVLINGVDVTAAPPADRPVSMLFQE 78 (211)
T ss_pred CEEEeEEEEeCCEec--ceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCcCCHhHccEEEEecc
Confidence 478999999987643 999999999999999999999999999999999999999999986542 4566665
Q ss_pred chhhcCCCccHHHHHHHHhc---c---ccHHHHHHHHhhcCCCcccccccCCCCCHHHHHHHHHHHHhccCCcEEEEeCC
Q 005532 497 QAEALDLDKTVLETVAEAAE---D---WRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEP 570 (692)
Q Consensus 497 ~~~~l~~~~tv~e~~~~~~~---~---~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~LAral~~~p~lLlLDEP 570 (692)
. .+.+..|+.+|+..... . .....+.++++.+++. ...++++.+||||||||++|||||+.+|++||||||
T Consensus 79 ~--~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LS~G~~qrv~ia~al~~~p~llllDEP 155 (211)
T cd03298 79 N--NLFAHLTVEQNVGLGLSPGLKLTAEDRQAIEVALARVGLA-GLEKRLPGELSGGERQRVALARVLVRDKPVLLLDEP 155 (211)
T ss_pred c--ccCCCCcHHHHHhcccccccCccHHHHHHHHHHHHHcCCH-HHHhCCcccCCHHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 3 45667899999875321 1 1233578899999995 567889999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEECCEEEE
Q 005532 571 TNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQD 620 (692)
Q Consensus 571 Tn~LD~~~~~~l~~~l~~~----~~tviivSHd~~~l~~~~d~i~~l~~g~l~~ 620 (692)
|++||+.+++.+.+.|+++ +.|||+||||++++..+||++++|++|++..
T Consensus 156 ~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~ 209 (211)
T cd03298 156 FAALDPALRAEMLDLVLDLHAETKMTVLMVTHQPEDAKRLAQRVVFLDNGRIAA 209 (211)
T ss_pred cccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhhhCEEEEEECCEEee
Confidence 9999999999999999764 4699999999999999999999999999864
No 325
>PRK13547 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-39 Score=339.70 Aligned_cols=207 Identities=24% Similarity=0.302 Sum_probs=170.8
Q ss_pred EEEEeEEEEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCC--------ccEEEECCCCc--------
Q 005532 98 VKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPD--------SGNVIKAKSNM-------- 161 (692)
Q Consensus 98 l~i~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~--------~G~I~~~~~~~-------- 161 (692)
|+++|++++|+++++|+|+||+|++|++++|+||||||||||+++|+|+++|+ +|+|.++|...
T Consensus 2 l~~~nl~~~~~~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~laG~~~p~~~~~~~~~~G~i~~~g~~~~~~~~~~~ 81 (272)
T PRK13547 2 LTADHLHVARRHRAILRDLSLRIEPGRVTALLGRNGAGKSTLLKALAGDLTGGGAPRGARVTGDVTLNGEPLAAIDAPRL 81 (272)
T ss_pred eEEEEEEEEECCEeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCcccccccCCceEEEECCEEcccCCHHHH
Confidence 88999999999889999999999999999999999999999999999999998 99999987421
Q ss_pred --eEEEEcccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHH
Q 005532 162 --KIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKV 239 (692)
Q Consensus 162 --~i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 239 (692)
.++|++|++..++..|+.||+........ ... ..........+
T Consensus 82 ~~~~~~v~q~~~~~~~~tv~e~l~~~~~~~~-------------~~~----------------------~~~~~~~~~~~ 126 (272)
T PRK13547 82 ARLRAVLPQAAQPAFAFSAREIVLLGRYPHA-------------RRA----------------------GALTHRDGEIA 126 (272)
T ss_pred HhhcEEecccCCCCCCCcHHHHHhhcccccc-------------ccc----------------------ccCCHHHHHHH
Confidence 38999999876667899999853210000 000 00001112346
Q ss_pred HHHhhhcCCCccccccccccCChHHHHHHHHHHHHc---------cCCCeEEEcCCCCCCCHHHHHHHHHHHcc----CC
Q 005532 240 SKLMPELGFTADDGDRLVASFSSGWQMRMSLGKILL---------QDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QD 306 (692)
Q Consensus 240 ~~ll~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~---------~~p~lLLLDEPts~LD~~~~~~L~~~L~~----~~ 306 (692)
.++++.+|+. ...++++.+|||||+|||+|||||+ .+|++|||||||++||+.+++++.++|++ .+
T Consensus 127 ~~~l~~~~l~-~~~~~~~~~LSgG~~qrv~laral~~~~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~ 205 (272)
T PRK13547 127 WQALALAGAT-ALVGRDVTTLSGGELARVQFARVLAQLWPPHDAAQPPRYLLLDEPTAALDLAHQHRLLDTVRRLARDWN 205 (272)
T ss_pred HHHHHHcCcH-hhhcCCcccCCHHHHHHHHHHHHHhccccccccCCCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhcC
Confidence 6788888986 4568889999999999999999999 59999999999999999999999887753 38
Q ss_pred CeEEEEecCHHHHHhhcCeEEEEecceEEEeccCh
Q 005532 307 VPMVIISHDRAFLDQLCTKIVETEMGVSRTYEGNY 341 (692)
Q Consensus 307 ~tvI~vsHd~~~l~~~~d~i~~l~~G~~~~~~G~y 341 (692)
.|||+||||++++..+||+++++++|++. +.|..
T Consensus 206 ~tviiisH~~~~~~~~~d~i~~l~~G~i~-~~g~~ 239 (272)
T PRK13547 206 LGVLAIVHDPNLAARHADRIAMLADGAIV-AHGAP 239 (272)
T ss_pred CEEEEEECCHHHHHHhCCEEEEEECCeEE-EecCH
Confidence 99999999999999999999999999974 45654
No 326
>PRK14255 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.2e-39 Score=334.37 Aligned_cols=202 Identities=22% Similarity=0.318 Sum_probs=162.4
Q ss_pred cEEEEeEEEEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCC--C---CccEEEECCCC-----------
Q 005532 97 GVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEE--P---DSGNVIKAKSN----------- 160 (692)
Q Consensus 97 ~l~i~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~--p---~~G~I~~~~~~----------- 160 (692)
+|+++|++++|+++++|+|+||+|.+|++++|+|+||||||||+++|+|+++ | ++|+|.++|.+
T Consensus 5 ~l~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~ 84 (252)
T PRK14255 5 IITSSDVHLFYGKFEALKGIDLDFNQNEITALIGPSGCGKSTYLRTLNRMNDLIPGVTITGNVSLRGQNIYAPNEDVVQL 84 (252)
T ss_pred eEEEEeEEEEECCeeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcccEEEEcCEEcccccccHHHh
Confidence 5999999999998889999999999999999999999999999999999875 5 58999998742
Q ss_pred -ceEEEEcccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHH
Q 005532 161 -MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKV 239 (692)
Q Consensus 161 -~~i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 239 (692)
..|+|++|++.+++ .|+.+|+...+.. ... ......+..+
T Consensus 85 ~~~i~~~~q~~~~~~-~tv~~nl~~~~~~---------------~~~-----------------------~~~~~~~~~~ 125 (252)
T PRK14255 85 RKQVGMVFQQPNPFP-FSIYENVIYGLRL---------------AGV-----------------------KDKAVLDEAV 125 (252)
T ss_pred cCeEEEEECCCccCC-CcHHHHHHHHHHH---------------cCC-----------------------CCHHHHHHHH
Confidence 25999999988766 7999998532110 000 0000011222
Q ss_pred HHHhhhcCCC---ccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc--CCCeEEEEec
Q 005532 240 SKLMPELGFT---ADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVIISH 314 (692)
Q Consensus 240 ~~ll~~lgl~---~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~--~~~tvI~vsH 314 (692)
.+.++.+++. ....++++.+|||||||||+|||||+.+|+||||||||++||+.+++++.++|++ .+.|||+|||
T Consensus 126 ~~~l~~~~l~~~i~~~~~~~~~~LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~vsH 205 (252)
T PRK14255 126 ETSLKQAAIWDEVKDHLHESALSLSGGQQQRVCIARVLAVKPDVILLDEPTSALDPISSTQIENMLLELRDQYTIILVTH 205 (252)
T ss_pred HHHHHHcCCccchhhHHhcCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHhCCEEEEEEC
Confidence 3334444432 1345678899999999999999999999999999999999999999999888753 2589999999
Q ss_pred CHHHHHhhcCeEEEEecceEEEe
Q 005532 315 DRAFLDQLCTKIVETEMGVSRTY 337 (692)
Q Consensus 315 d~~~l~~~~d~i~~l~~G~~~~~ 337 (692)
+++++..+||+|+++++|++..+
T Consensus 206 ~~~~~~~~~d~i~~l~~G~i~~~ 228 (252)
T PRK14255 206 SMHQASRISDKTAFFLTGNLIEF 228 (252)
T ss_pred CHHHHHHhCCEEEEEECCEEEEe
Confidence 99999999999999999998544
No 327
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=100.00 E-value=3.6e-39 Score=333.03 Aligned_cols=202 Identities=27% Similarity=0.391 Sum_probs=172.5
Q ss_pred eEEEEeEEEEcCCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCC-----eeEEEECCccce---------
Q 005532 424 VVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPR-----GGEVLLGEHNVL--------- 489 (692)
Q Consensus 424 ~l~~~~l~~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~-----~G~i~~~~~~~~--------- 489 (692)
+|+++||+++|++..+|+++||+|++||++||+|+||||||||+++|+|+++|+ +|+|.++|.++.
T Consensus 1 ~l~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~~~~~~~~~~~~~ 80 (247)
T TIGR00972 1 AIEIENLNLFYGEKEALKNINLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQDIYDKKIDVVEL 80 (247)
T ss_pred CEEEEEEEEEECCeeeecceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCEEccccccchHHH
Confidence 478999999999888999999999999999999999999999999999999998 999999887542
Q ss_pred ---eeeecccchhhcCCCccHHHHHHHHhccc---c----HHHHHHHHhhcCCCc---ccccccCCCCCHHHHHHHHHHH
Q 005532 490 ---PNYFEQNQAEALDLDKTVLETVAEAAEDW---R----IDDIKGLLGRCNFKA---DMLDRKVSLLSGGEKARLAFCK 556 (692)
Q Consensus 490 ---~~~~~q~~~~~l~~~~tv~e~~~~~~~~~---~----~~~~~~~L~~~~l~~---~~~~~~~~~LSgGqkqrv~LAr 556 (692)
.+|++|+. .+.+ .|+.+|+....... . ...+..+++.+|+.. ...++++.+|||||||||+|||
T Consensus 81 ~~~i~~v~q~~--~~~~-~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LSgG~~qrv~lar 157 (247)
T TIGR00972 81 RRRVGMVFQKP--NPFP-MSIYDNIAYGPRLHGIKDKKELDEIVEESLKKAALWDEVKDRLHDSALGLSGGQQQRLCIAR 157 (247)
T ss_pred HhheEEEecCc--ccCC-CCHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCCcchhhHhhCCcccCCHHHHHHHHHHH
Confidence 34555542 3555 89999987532111 1 235678899999952 4578899999999999999999
Q ss_pred HhccCCcEEEEeCCCCCCCHHHHHHHHHHHHhcC--ceEEEEecCHHHHHhhccEEEEEECCEEEEecCChhHHH
Q 005532 557 FMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEYK--GTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYYL 629 (692)
Q Consensus 557 al~~~p~lLlLDEPTn~LD~~~~~~l~~~l~~~~--~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~~~~ 629 (692)
||+.+|++|||||||++||+.++..+.++|+++. .|||+||||++++..+||+|++|++|++.. .|..+++.
T Consensus 158 al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~-~~~~~~~~ 231 (247)
T TIGR00972 158 ALAVEPEVLLLDEPTSALDPIATGKIEELIQELKKKYTIVIVTHNMQQAARISDRTAFFYDGELVE-YGPTEQIF 231 (247)
T ss_pred HHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCeEEEEecCHHHHHHhCCEEEEEECCEEEE-eCCHHHHH
Confidence 9999999999999999999999999999998753 599999999999999999999999999974 46666554
No 328
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.5e-39 Score=339.48 Aligned_cols=205 Identities=27% Similarity=0.402 Sum_probs=175.3
Q ss_pred ceEEEEeEEEEcC-CeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccce------------
Q 005532 423 SVVTIKNLEFGYE-DRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL------------ 489 (692)
Q Consensus 423 ~~l~~~~l~~~y~-~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~~------------ 489 (692)
++|+++|+++.|+ ++.+|+++||+|++||++||+|+||||||||+++|+|+++|++|+|.++|.++.
T Consensus 4 ~~l~~~~l~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~~ 83 (283)
T PRK13636 4 YILKVEELNYNYSDGTHALKGININIKKGEVTAILGGNGAGKSTLFQNLNGILKPSSGRILFDGKPIDYSRKGLMKLRES 83 (283)
T ss_pred ceEEEEeEEEEeCCCCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCccEEEECCEECCCCcchHHHHHhh
Confidence 4799999999996 577999999999999999999999999999999999999999999999987641
Q ss_pred eeeecccchhhcCCCccHHHHHHHHhcc--cc----HHHHHHHHhhcCCCcccccccCCCCCHHHHHHHHHHHHhccCCc
Q 005532 490 PNYFEQNQAEALDLDKTVLETVAEAAED--WR----IDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPST 563 (692)
Q Consensus 490 ~~~~~q~~~~~l~~~~tv~e~~~~~~~~--~~----~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~LAral~~~p~ 563 (692)
.+|++|+....+ ...|+.+|+...... .. ...+..+++.+|+. ...++++.+||||||||++|||||+.+|+
T Consensus 84 ig~v~q~~~~~~-~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~-~~~~~~~~~LS~G~~qrl~laraL~~~p~ 161 (283)
T PRK13636 84 VGMVFQDPDNQL-FSASVYQDVSFGAVNLKLPEDEVRKRVDNALKRTGIE-HLKDKPTHCLSFGQKKRVAIAGVLVMEPK 161 (283)
T ss_pred EEEEecCcchhh-ccccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHCCCh-hhhhCCcccCCHHHHHHHHHHHHHHcCCC
Confidence 356666542222 457999999753221 11 23477889999995 56899999999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEECCEEEEecCChhHHHH
Q 005532 564 LLVLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYYLE 630 (692)
Q Consensus 564 lLlLDEPTn~LD~~~~~~l~~~l~~~----~~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~~~~~ 630 (692)
||||||||++||+.++..+.++|+++ +.|||+||||++++..+|||+++|++|++. +.|.++++..
T Consensus 162 lLilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvsH~~~~~~~~~dri~~l~~G~i~-~~g~~~~~~~ 231 (283)
T PRK13636 162 VLVLDEPTAGLDPMGVSEIMKLLVEMQKELGLTIIIATHDIDIVPLYCDNVFVMKEGRVI-LQGNPKEVFA 231 (283)
T ss_pred EEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEE-EeCCHHHHhc
Confidence 99999999999999999999988754 469999999999999999999999999997 4588777654
No 329
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.3e-39 Score=339.91 Aligned_cols=206 Identities=24% Similarity=0.331 Sum_probs=171.5
Q ss_pred cEEEEeEEEEeCC---eeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC----------ceE
Q 005532 97 GVKLENISKSYKG---VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN----------MKI 163 (692)
Q Consensus 97 ~l~i~~ls~~y~~---~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~----------~~i 163 (692)
+|+++|++++|++ .++|+|+||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|.. ..|
T Consensus 4 ~l~~~~l~~~~~~~~~~~~l~~v~l~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~i 83 (277)
T PRK13642 4 ILEVENLVFKYEKESDVNQLNGVSFSITKGEWVSIIGQNGSGKSTTARLIDGLFEEFEGKVKIDGELLTAENVWNLRRKI 83 (277)
T ss_pred eEEEEEEEEEcCCCCcCeeeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCCEEEECCEECCcCCHHHHhcce
Confidence 5999999999974 259999999999999999999999999999999999999999999998743 249
Q ss_pred EEEcccCc-cCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHH
Q 005532 164 AFLSQEFE-VSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKL 242 (692)
Q Consensus 164 ~~v~Q~~~-~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l 242 (692)
+|++|++. .++..||.+|+...... . ......+.+++..+
T Consensus 84 ~~v~q~~~~~~~~~tv~eni~~~~~~---------------~------------------------~~~~~~~~~~~~~~ 124 (277)
T PRK13642 84 GMVFQNPDNQFVGATVEDDVAFGMEN---------------Q------------------------GIPREEMIKRVDEA 124 (277)
T ss_pred EEEEECHHHhhccCCHHHHHHhhHHH---------------c------------------------CCCHHHHHHHHHHH
Confidence 99999984 45678999998532100 0 00111223456677
Q ss_pred hhhcCCCccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHc---c-CCCeEEEEecCHHH
Q 005532 243 MPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG---K-QDVPMVIISHDRAF 318 (692)
Q Consensus 243 l~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~---~-~~~tvI~vsHd~~~ 318 (692)
++.+|+. ...++++.+|||||||||+|||||+.+|++|||||||++||+.+++++.+.|+ + .+.|||+||||+++
T Consensus 125 l~~~~l~-~~~~~~~~~LS~G~~qrv~lAraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tiil~sH~~~~ 203 (277)
T PRK13642 125 LLAVNML-DFKTREPARLSGGQKQRVAVAGIIALRPEIIILDESTSMLDPTGRQEIMRVIHEIKEKYQLTVLSITHDLDE 203 (277)
T ss_pred HHHCCCH-hHhhCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHH
Confidence 8888885 56788899999999999999999999999999999999999999999988764 2 48999999999999
Q ss_pred HHhhcCeEEEEecceEEEeccChHHH
Q 005532 319 LDQLCTKIVETEMGVSRTYEGNYSQY 344 (692)
Q Consensus 319 l~~~~d~i~~l~~G~~~~~~G~y~~~ 344 (692)
+. .||+|+++++|++. ..|..+++
T Consensus 204 ~~-~~d~i~~l~~G~i~-~~g~~~~~ 227 (277)
T PRK13642 204 AA-SSDRILVMKAGEII-KEAAPSEL 227 (277)
T ss_pred HH-hCCEEEEEECCEEE-EeCCHHHH
Confidence 97 59999999999974 55765544
No 330
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=2.3e-39 Score=330.86 Aligned_cols=201 Identities=24% Similarity=0.362 Sum_probs=169.3
Q ss_pred EEEEeEEEEcCCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccce-----------eeee
Q 005532 425 VTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL-----------PNYF 493 (692)
Q Consensus 425 l~~~~l~~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~~-----------~~~~ 493 (692)
|+++||++.|+++++|+++||+|++||++||+|+||||||||+++|+|+++|++|+|.++|.++. .+|+
T Consensus 1 l~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~i~~~ 80 (230)
T TIGR03410 1 LEVSNLNVYYGQSHILRGVSLEVPKGEVTCVLGRNGVGKTTLLKTLMGLLPVKSGSIRLDGEDITKLPPHERARAGIAYV 80 (230)
T ss_pred CEEEeEEEEeCCeEEecceeeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCCHHHHHHhCeEEe
Confidence 57899999999889999999999999999999999999999999999999999999999886531 3455
Q ss_pred cccchhhcCCCccHHHHHHHHhccc---cHHHHHHHHhhcCCCcccccccCCCCCHHHHHHHHHHHHhccCCcEEEEeCC
Q 005532 494 EQNQAEALDLDKTVLETVAEAAEDW---RIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEP 570 (692)
Q Consensus 494 ~q~~~~~l~~~~tv~e~~~~~~~~~---~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~LAral~~~p~lLlLDEP 570 (692)
+|.. .+++..|+.+|+....... .......+++.+++.....++++.+||||||||++|||||+.+|++||||||
T Consensus 81 ~q~~--~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~illlDEP 158 (230)
T TIGR03410 81 PQGR--EIFPRLTVEENLLTGLAALPRRSRKIPDEIYELFPVLKEMLGRRGGDLSGGQQQQLAIARALVTRPKLLLLDEP 158 (230)
T ss_pred ccCC--cccCCCcHHHHHHHHHHhcCcchHHHHHHHHHHHHhHHHHhhCChhhCCHHHHHHHHHHHHHhcCCCEEEecCC
Confidence 6543 4566789999987543221 1223456677776323557889999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEECCEEEEecCChhHH
Q 005532 571 TNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYY 628 (692)
Q Consensus 571 Tn~LD~~~~~~l~~~l~~~----~~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~~~ 628 (692)
|++||+.++..+.+.|.++ +.|||+||||.+++..+||+|++|++|++.. .|+.++.
T Consensus 159 t~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~g~i~~-~~~~~~~ 219 (230)
T TIGR03410 159 TEGIQPSIIKDIGRVIRRLRAEGGMAILLVEQYLDFARELADRYYVMERGRVVA-SGAGDEL 219 (230)
T ss_pred cccCCHHHHHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHhCCEEEEEECCEEEE-ECCHHHc
Confidence 9999999999999999864 4699999999999999999999999999974 4665544
No 331
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.3e-39 Score=333.19 Aligned_cols=203 Identities=23% Similarity=0.372 Sum_probs=174.1
Q ss_pred eEEEEeEEEEcCCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccce-----------eee
Q 005532 424 VVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL-----------PNY 492 (692)
Q Consensus 424 ~l~~~~l~~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~~-----------~~~ 492 (692)
+|+++|+++.|+++.+|+++||+|++|+++||+||||||||||+++|+|+++|++|+|.++|.++. .+|
T Consensus 3 ~l~~~~l~~~~~~~~~l~~~sl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~i~~ 82 (241)
T PRK10895 3 TLTAKNLAKAYKGRRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNIIIDDEDISLLPLHARARRGIGY 82 (241)
T ss_pred eEEEeCcEEEeCCEEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHHhCeEE
Confidence 689999999999889999999999999999999999999999999999999999999999886531 345
Q ss_pred ecccchhhcCCCccHHHHHHHHhcc---c----cHHHHHHHHhhcCCCcccccccCCCCCHHHHHHHHHHHHhccCCcEE
Q 005532 493 FEQNQAEALDLDKTVLETVAEAAED---W----RIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLL 565 (692)
Q Consensus 493 ~~q~~~~~l~~~~tv~e~~~~~~~~---~----~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~LAral~~~p~lL 565 (692)
++|+ ..+.+..|+.+|+...... . ....+.++++.+++. ...++++.+|||||||||+|||||+.+|++|
T Consensus 83 ~~q~--~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LS~G~~qrv~laral~~~p~ll 159 (241)
T PRK10895 83 LPQE--ASIFRRLSVYDNLMAVLQIRDDLSAEQREDRANELMEEFHIE-HLRDSMGQSLSGGERRRVEIARALAANPKFI 159 (241)
T ss_pred eccC--CcccccCcHHHHHhhhhhcccccCHHHHHHHHHHHHHHcCCH-HHhhcchhhCCHHHHHHHHHHHHHhcCCCEE
Confidence 5554 3455678999998753211 1 123477889999995 5678899999999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhccEEEEEECCEEEEecCChhHHHH
Q 005532 566 VLDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYYLE 630 (692)
Q Consensus 566 lLDEPTn~LD~~~~~~l~~~l~~~---~~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~~~~~ 630 (692)
||||||++||+.+++.+.+.|.++ +.|||+||||++++..+||++++|++|++.. .|+++++..
T Consensus 160 llDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~~~~~~~d~v~~l~~G~i~~-~~~~~~~~~ 226 (241)
T PRK10895 160 LLDEPFAGVDPISVIDIKRIIEHLRDSGLGVLITDHNVRETLAVCERAYIVSQGHLIA-HGTPTEILQ 226 (241)
T ss_pred EEcCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhcCEEEEEeCCeEEe-eCCHHHHhc
Confidence 999999999999999998888754 5699999999999999999999999999974 577776643
No 332
>PRK10253 iron-enterobactin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.9e-39 Score=336.12 Aligned_cols=204 Identities=28% Similarity=0.395 Sum_probs=175.1
Q ss_pred CceEEEEeEEEEcCCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccce----------ee
Q 005532 422 RSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL----------PN 491 (692)
Q Consensus 422 ~~~l~~~~l~~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~~----------~~ 491 (692)
..+|+++||+++|+++.+|+++||+|.+|++++|+||||||||||+++|+|+++|++|+|.++|.++. .+
T Consensus 5 ~~~l~i~~l~~~~~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 84 (265)
T PRK10253 5 VARLRGEQLTLGYGKYTVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMTPAHGHVWLDGEHIQHYASKEVARRIG 84 (265)
T ss_pred ccEEEEEEEEEEECCEEEeeecceEECCCCEEEEECCCCCCHHHHHHHHcCCCCCCCcEEEECCEEhhhCCHHHHhhheE
Confidence 45699999999999888999999999999999999999999999999999999999999999986541 35
Q ss_pred eecccchhhcCCCccHHHHHHHHh-c---------cccHHHHHHHHhhcCCCcccccccCCCCCHHHHHHHHHHHHhccC
Q 005532 492 YFEQNQAEALDLDKTVLETVAEAA-E---------DWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKP 561 (692)
Q Consensus 492 ~~~q~~~~~l~~~~tv~e~~~~~~-~---------~~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~LAral~~~ 561 (692)
|++|+. .+.+..|+.+|+.... . ......+..+++.+++. ...++++.+||||||||++|||||+.+
T Consensus 85 ~v~q~~--~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LS~Gq~qrv~laral~~~ 161 (265)
T PRK10253 85 LLAQNA--TTPGDITVQELVARGRYPHQPLFTRWRKEDEEAVTKAMQATGIT-HLADQSVDTLSGGQRQRAWIAMVLAQE 161 (265)
T ss_pred EeeccC--cCCCCCcHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCH-HHhcCCcccCChHHHHHHHHHHHHhcC
Confidence 666653 4556789999987531 1 01123567889999995 567899999999999999999999999
Q ss_pred CcEEEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEECCEEEEecCChhHHH
Q 005532 562 STLLVLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYYL 629 (692)
Q Consensus 562 p~lLlLDEPTn~LD~~~~~~l~~~l~~~----~~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~~~~ 629 (692)
|++|||||||++||+.+++.+.+.|.++ +.|||+||||++++.++||++++|++|++.. .|..+++.
T Consensus 162 p~llllDEPt~gLD~~~~~~l~~~L~~l~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~-~g~~~~~~ 232 (265)
T PRK10253 162 TAIMLLDEPTTWLDISHQIDLLELLSELNREKGYTLAAVLHDLNQACRYASHLIALREGKIVA-QGAPKEIV 232 (265)
T ss_pred CCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEE-eCCHHHHh
Confidence 9999999999999999999999998764 4599999999999999999999999999974 56665553
No 333
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=9.6e-40 Score=306.66 Aligned_cols=203 Identities=29% Similarity=0.461 Sum_probs=174.5
Q ss_pred eEEEEeEEEEcCCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCcccee--------eeecc
Q 005532 424 VVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLP--------NYFEQ 495 (692)
Q Consensus 424 ~l~~~~l~~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~~~--------~~~~q 495 (692)
+|.+++|.+.|+..+. .++++|+.||++||+||+||||||||++|+|+..|.+|+|+++|.+... ..++
T Consensus 1 ~l~L~~V~~~y~~~~~--~fdl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~P~~G~i~i~g~d~t~~~P~~RPVSmlF- 77 (231)
T COG3840 1 MLALDDVRFSYGHLPM--RFDLTVPAGEIVAILGPSGAGKSTLLNLIAGFETPASGEILINGVDHTASPPAERPVSMLF- 77 (231)
T ss_pred CccccceEEeeCcceE--EEEEeecCCcEEEEECCCCccHHHHHHHHHhccCCCCceEEEcCeecCcCCcccCChhhhh-
Confidence 3678899999986543 5789999999999999999999999999999999999999999987631 1223
Q ss_pred cchhhcCCCccHHHHHHHHhc------cccHHHHHHHHhhcCCCcccccccCCCCCHHHHHHHHHHHHhccCCcEEEEeC
Q 005532 496 NQAEALDLDKTVLETVAEAAE------DWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDE 569 (692)
Q Consensus 496 ~~~~~l~~~~tv~e~~~~~~~------~~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~LAral~~~p~lLlLDE 569 (692)
+..+++...||.+|+..... ....+.+..++.++|+ ....++.+.+|||||||||+|||+|+++-+||||||
T Consensus 78 -QEnNLFaHLtV~qNigLGl~P~LkL~a~~r~~v~~aa~~vGl-~~~~~RLP~~LSGGqRQRvALARclvR~~PilLLDE 155 (231)
T COG3840 78 -QENNLFAHLTVAQNIGLGLSPGLKLNAEQREKVEAAAAQVGL-AGFLKRLPGELSGGQRQRVALARCLVREQPILLLDE 155 (231)
T ss_pred -hccccchhhhhhhhhcccCCcccccCHHHHHHHHHHHHHhCh-hhHhhhCccccCchHHHHHHHHHHHhccCCeEEecC
Confidence 34678899999999976532 1223468889999999 467899999999999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEECCEEEEecCChhHHHHHh
Q 005532 570 PTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYYLEKN 632 (692)
Q Consensus 570 PTn~LD~~~~~~l~~~l~~~----~~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~~~~~~~ 632 (692)
|++.||+.-+..+..++.+. +.|++||||..+.+.+++++++++++|+|. +.|..++++..+
T Consensus 156 PFsALdP~LR~eMl~Lv~~l~~E~~~TllmVTH~~~Da~~ia~~~~fl~~Gri~-~~g~~~~~~~~~ 221 (231)
T COG3840 156 PFSALDPALRAEMLALVSQLCDERKMTLLMVTHHPEDAARIADRVVFLDNGRIA-AQGSTQELLSGK 221 (231)
T ss_pred chhhcCHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHHhhhceEEEeCCEEE-eeccHHHHhccC
Confidence 99999999999988887654 459999999999999999999999999998 678888877643
No 334
>PRK14246 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.4e-39 Score=334.88 Aligned_cols=210 Identities=18% Similarity=0.293 Sum_probs=171.0
Q ss_pred CCcEEEEeEEEEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECC------C---------
Q 005532 95 SSGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAK------S--------- 159 (692)
Q Consensus 95 ~~~l~i~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~------~--------- 159 (692)
.++|.++|++++|+++++|+|+||+|.+|++++|+|+||||||||+++|+|+++|++|+|.++| .
T Consensus 8 ~~~i~~~~~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~iaG~~~~~~G~v~~~G~~~~~g~~~~~~~~~~ 87 (257)
T PRK14246 8 EDVFNISRLYLYINDKAILKDITIKIPNNSIFGIMGPSGSGKSTLLKVLNRLIEIYDSKIKVDGKVLYFGKDIFQIDAIK 87 (257)
T ss_pred hhheeeeeEEEecCCceeEeceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCcCceeEcCEEEECCcccccCCHHH
Confidence 4579999999999999999999999999999999999999999999999999999997766554 2
Q ss_pred -CceEEEEcccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHH
Q 005532 160 -NMKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAK 238 (692)
Q Consensus 160 -~~~i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (692)
...++|++|++.+++..|+.+|+...... .. ..+......+
T Consensus 88 ~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~---------------~~-----------------------~~~~~~~~~~ 129 (257)
T PRK14246 88 LRKEVGMVFQQPNPFPHLSIYDNIAYPLKS---------------HG-----------------------IKEKREIKKI 129 (257)
T ss_pred HhcceEEEccCCccCCCCcHHHHHHHHHHh---------------cC-----------------------CCCHHHHHHH
Confidence 13599999999887788999998532100 00 0000112234
Q ss_pred HHHHhhhcCCCc---cccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc--CCCeEEEEe
Q 005532 239 VSKLMPELGFTA---DDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVIIS 313 (692)
Q Consensus 239 i~~ll~~lgl~~---~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~--~~~tvI~vs 313 (692)
+.++++.+|+.. ...++.+..||||||||++|||||+.+|++|||||||++||+.++.++.++|.+ .+.|||+||
T Consensus 130 ~~~~~~~~~l~~~~~~~~~~~~~~LS~G~~qrl~laral~~~P~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiilvs 209 (257)
T PRK14246 130 VEECLRKVGLWKEVYDRLNSPASQLSGGQQQRLTIARALALKPKVLLMDEPTSMIDIVNSQAIEKLITELKNEIAIVIVS 209 (257)
T ss_pred HHHHHHHcCCCccchhhhcCCcccCCHHHHHHHHHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCcEEEEEE
Confidence 556677777742 245778899999999999999999999999999999999999999999988753 368999999
Q ss_pred cCHHHHHhhcCeEEEEecceEEEeccChHH
Q 005532 314 HDRAFLDQLCTKIVETEMGVSRTYEGNYSQ 343 (692)
Q Consensus 314 Hd~~~l~~~~d~i~~l~~G~~~~~~G~y~~ 343 (692)
|+++++..+||+++++++|++.. .|..++
T Consensus 210 h~~~~~~~~~d~v~~l~~g~i~~-~g~~~~ 238 (257)
T PRK14246 210 HNPQQVARVADYVAFLYNGELVE-WGSSNE 238 (257)
T ss_pred CCHHHHHHhCCEEEEEECCEEEE-ECCHHH
Confidence 99999999999999999999854 454433
No 335
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.3e-39 Score=339.38 Aligned_cols=203 Identities=27% Similarity=0.352 Sum_probs=170.7
Q ss_pred EEEEeEEEEcCC-----eecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccce----------
Q 005532 425 VTIKNLEFGYED-----RLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL---------- 489 (692)
Q Consensus 425 l~~~~l~~~y~~-----~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~~---------- 489 (692)
|+++||++.|++ +++|+++||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.++.
T Consensus 3 l~~~~l~~~~~~~~~~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (280)
T PRK13649 3 INLQNVSYTYQAGTPFEGRALFDVNLTIEDGSYTAFIGHTGSGKSTIMQLLNGLHVPTQGSVRVDDTLITSTSKNKDIKQ 82 (280)
T ss_pred EEEEEEEEEcCCCCccccceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccCHHH
Confidence 889999999974 36999999999999999999999999999999999999999999999886542
Q ss_pred ----eeeecccchhhcCCCccHHHHHHHHhcc--cc----HHHHHHHHhhcCCCcccccccCCCCCHHHHHHHHHHHHhc
Q 005532 490 ----PNYFEQNQAEALDLDKTVLETVAEAAED--WR----IDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMV 559 (692)
Q Consensus 490 ----~~~~~q~~~~~l~~~~tv~e~~~~~~~~--~~----~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~LAral~ 559 (692)
.+|++|+....+. ..|+.+|+...... .. ...+.++++.+++.....++++.+|||||||||+|||||+
T Consensus 83 ~~~~i~~~~q~~~~~~~-~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LSgG~~qrv~la~al~ 161 (280)
T PRK13649 83 IRKKVGLVFQFPESQLF-EETVLKDVAFGPQNFGVSQEEAEALAREKLALVGISESLFEKNPFELSGGQMRRVAIAGILA 161 (280)
T ss_pred HHhheEEEeeChhhhhc-cccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCChhhhhCCcccCCHHHHHHHHHHHHHH
Confidence 3566665321233 46999998754221 11 1236678899999644578999999999999999999999
Q ss_pred cCCcEEEEeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhccEEEEEECCEEEEecCChhHHH
Q 005532 560 KPSTLLVLDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYYL 629 (692)
Q Consensus 560 ~~p~lLlLDEPTn~LD~~~~~~l~~~l~~~---~~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~~~~ 629 (692)
.+|+||||||||++||+.+++.+.+.|.++ +.|||+||||++++..+||++++|++|++.. .|..+++.
T Consensus 162 ~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~-~g~~~~~~ 233 (280)
T PRK13649 162 MEPKILVLDEPTAGLDPKGRKELMTLFKKLHQSGMTIVLVTHLMDDVANYADFVYVLEKGKLVL-SGKPKDIF 233 (280)
T ss_pred cCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeccHHHHHHhCCEEEEEECCEEEE-eCCHHHHh
Confidence 999999999999999999999999998865 4699999999999999999999999999985 46655543
No 336
>PRK14260 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.6e-39 Score=334.55 Aligned_cols=209 Identities=18% Similarity=0.257 Sum_probs=168.3
Q ss_pred CcEEEEeEEEEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCC-----CccEEEECCCC----------
Q 005532 96 SGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEP-----DSGNVIKAKSN---------- 160 (692)
Q Consensus 96 ~~l~i~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p-----~~G~I~~~~~~---------- 160 (692)
+.|+++|+++.|++.++|+|+||+|++|++++|+|+||||||||+++|+|+++| ++|+|.++|.+
T Consensus 6 ~~l~~~~l~~~~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLlk~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~ 85 (259)
T PRK14260 6 PAIKVKDLSFYYNTSKAIEGISMDIYRNKVTAIIGPSGCGKSTFIKTLNRISELEGPVKVEGVVDFFGQNIYDPRININR 85 (259)
T ss_pred ceEEEEEEEEEECCeEeecceEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcCcccCCccceEEEECCEeccccccchHh
Confidence 359999999999988899999999999999999999999999999999999985 48999998642
Q ss_pred --ceEEEEcccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHH
Q 005532 161 --MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAK 238 (692)
Q Consensus 161 --~~i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (692)
..|+|++|++.+++ .|+.+|+...+... . ..+.......
T Consensus 86 ~~~~i~~v~q~~~l~~-~tv~enl~~~~~~~---------------~-----------------------~~~~~~~~~~ 126 (259)
T PRK14260 86 LRRQIGMVFQRPNPFP-MSIYENVAYGVRIS---------------A-----------------------KLPQADLDEI 126 (259)
T ss_pred hhhheEEEecccccCC-ccHHHHHHHHHHHh---------------c-----------------------CCCHHHHHHH
Confidence 25999999988765 89999985321100 0 0000111233
Q ss_pred HHHHhhhcCCC---ccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc--CCCeEEEEe
Q 005532 239 VSKLMPELGFT---ADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVIIS 313 (692)
Q Consensus 239 i~~ll~~lgl~---~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~--~~~tvI~vs 313 (692)
+.++++.+|+. ....++.+.+|||||+|||+|||||+.+|++|||||||++||+.++.++.++|++ .++|||+||
T Consensus 127 ~~~~l~~~~l~~~l~~~~~~~~~~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~t 206 (259)
T PRK14260 127 VESALKGAALWQEVKDKLNKSALGLSGGQQQRLCIARALAIKPKVLLMDEPCSALDPIATMKVEELIHSLRSELTIAIVT 206 (259)
T ss_pred HHHHHHHcCCcchhhhHhcCCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEe
Confidence 44556666653 1346778899999999999999999999999999999999999999999888753 368999999
Q ss_pred cCHHHHHhhcCeEEEEe-----cceEEEeccChHHH
Q 005532 314 HDRAFLDQLCTKIVETE-----MGVSRTYEGNYSQY 344 (692)
Q Consensus 314 Hd~~~l~~~~d~i~~l~-----~G~~~~~~G~y~~~ 344 (692)
|+++++..+||++++++ +|++. ..|...++
T Consensus 207 H~~~~i~~~~d~i~~l~~~~~~~G~i~-~~~~~~~~ 241 (259)
T PRK14260 207 HNMQQATRVSDFTAFFSTDESRIGQMV-EFGVTTQI 241 (259)
T ss_pred CCHHHHHHhcCeEEEEeccCCCCceEE-EeCCHHHH
Confidence 99999999999999997 48874 55665443
No 337
>PRK15093 antimicrobial peptide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.1e-39 Score=345.69 Aligned_cols=206 Identities=20% Similarity=0.329 Sum_probs=174.7
Q ss_pred ceEEEEeEEEEcC----CeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCC----CCeeEEEECCccc------
Q 005532 423 SVVTIKNLEFGYE----DRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEK----PRGGEVLLGEHNV------ 488 (692)
Q Consensus 423 ~~l~~~~l~~~y~----~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~----p~~G~i~~~~~~~------ 488 (692)
++|+++||++.|+ ...+|+|+||+|.+||++||+|+||||||||+++|+|+++ |++|+|.++|.++
T Consensus 2 ~~L~v~~l~~~y~~~~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTLl~~i~Gl~~~~~~~~~G~i~~~g~~i~~~~~~ 81 (330)
T PRK15093 2 PLLDIRNLTIEFKTSDGWVKAVDRVSMTLTEGEIRGLVGESGSGKSLIAKAICGVTKDNWRVTADRMRFDDIDLLRLSPR 81 (330)
T ss_pred CeEEEeeeEEEEeCCCCCEEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHHccCCCCCCCcceEEEECCEECCcCCHH
Confidence 3699999999994 4579999999999999999999999999999999999996 5899999998654
Q ss_pred --------eeeeecccchhhcCCCccHHHHHHHHhc------cc------cHHHHHHHHhhcCCCc--ccccccCCCCCH
Q 005532 489 --------LPNYFEQNQAEALDLDKTVLETVAEAAE------DW------RIDDIKGLLGRCNFKA--DMLDRKVSLLSG 546 (692)
Q Consensus 489 --------~~~~~~q~~~~~l~~~~tv~e~~~~~~~------~~------~~~~~~~~L~~~~l~~--~~~~~~~~~LSg 546 (692)
..+|++|+....+.+..|+.+++..... .+ ....+.++|+.+|+.. ...++.+.+|||
T Consensus 82 ~~~~~~~~~i~~v~Q~~~~~l~p~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gL~~~~~~~~~~p~~LSg 161 (330)
T PRK15093 82 ERRKLVGHNVSMIFQEPQSCLDPSERVGRQLMQNIPGWTYKGRWWQRFGWRKRRAIELLHRVGIKDHKDAMRSFPYELTE 161 (330)
T ss_pred HHHHHhCCCEEEEecCcchhcCccccHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHHCCCCChHHHHhCCchhCCH
Confidence 1457777755556778899888864211 01 1235788999999963 245789999999
Q ss_pred HHHHHHHHHHHhccCCcEEEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEECCEEEEec
Q 005532 547 GEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYA 622 (692)
Q Consensus 547 Gqkqrv~LAral~~~p~lLlLDEPTn~LD~~~~~~l~~~l~~~----~~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~ 622 (692)
||||||+|||||+.+|+||||||||++||+.++..+.++|+++ +.|||+||||+.++..+||+|++|++|++++ .
T Consensus 162 G~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~tii~itHdl~~v~~~~dri~vm~~G~ive-~ 240 (330)
T PRK15093 162 GECQKVMIAIALANQPRLLIADEPTNAMEPTTQAQIFRLLTRLNQNNNTTILLISHDLQMLSQWADKINVLYCGQTVE-T 240 (330)
T ss_pred HHHHHHHHHHHHHCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEEE-E
Confidence 9999999999999999999999999999999999999998864 5699999999999999999999999999985 4
Q ss_pred CChhHHH
Q 005532 623 GDYNYYL 629 (692)
Q Consensus 623 g~~~~~~ 629 (692)
|+.+++.
T Consensus 241 g~~~~i~ 247 (330)
T PRK15093 241 APSKELV 247 (330)
T ss_pred CCHHHHH
Confidence 6655554
No 338
>PRK10418 nikD nickel transporter ATP-binding protein NikD; Provisional
Probab=100.00 E-value=4.9e-39 Score=333.38 Aligned_cols=205 Identities=20% Similarity=0.289 Sum_probs=168.2
Q ss_pred cEEEEeEEEEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCC----CccEEEECCCC--------ceEE
Q 005532 97 GVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEP----DSGNVIKAKSN--------MKIA 164 (692)
Q Consensus 97 ~l~i~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p----~~G~I~~~~~~--------~~i~ 164 (692)
.|+++|++++| ++++|+|+||+|++|++++|+|+||||||||+++|+|+++| ++|+|.++|.+ ..|+
T Consensus 4 ~l~~~~l~~~~-~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~G~i~~~g~~i~~~~~~~~~i~ 82 (254)
T PRK10418 4 QIELRNIALQA-AQPLVHGVSLTLQRGRVLALVGGSGSGKSLTCAAALGILPAGVRQTAGRVLLDGKPVAPCALRGRKIA 82 (254)
T ss_pred EEEEeCeEEEe-ccceecceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCcCCEEEECCeeccccccccceEE
Confidence 48999999999 56899999999999999999999999999999999999999 99999998743 3599
Q ss_pred EEcccCc--cCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHH
Q 005532 165 FLSQEFE--VSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKL 242 (692)
Q Consensus 165 ~v~Q~~~--~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l 242 (692)
|++|++. +.+..|+.+++..... . ......+.++.++
T Consensus 83 ~v~q~~~~~~~~~~~~~~~~~~~~~-----------------~------------------------~~~~~~~~~~~~~ 121 (254)
T PRK10418 83 TIMQNPRSAFNPLHTMHTHARETCL-----------------A------------------------LGKPADDATLTAA 121 (254)
T ss_pred EEecCCccccCccccHHHHHHHHHH-----------------H------------------------cCCChHHHHHHHH
Confidence 9999974 2234577776531100 0 0000112456677
Q ss_pred hhhcCCCcc--ccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc----CCCeEEEEecCH
Q 005532 243 MPELGFTAD--DGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVIISHDR 316 (692)
Q Consensus 243 l~~lgl~~~--~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~----~~~tvI~vsHd~ 316 (692)
++.+|+.+. ..++++.+|||||+|||+|||||+.+|+||||||||++||+.+++.+.+.|++ .+.|||+|||++
T Consensus 122 l~~~~l~~~~~~~~~~~~~LS~Gq~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~~~~~g~til~~sH~~ 201 (254)
T PRK10418 122 LEAVGLENAARVLKLYPFEMSGGMLQRMMIALALLCEAPFIIADEPTTDLDVVAQARILDLLESIVQKRALGMLLVTHDM 201 (254)
T ss_pred HHHcCCCChhhhhhcCCcccCHHHHHHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHhcCcEEEEEecCH
Confidence 888888632 46788999999999999999999999999999999999999999988887643 478999999999
Q ss_pred HHHHhhcCeEEEEecceEEEeccChHHH
Q 005532 317 AFLDQLCTKIVETEMGVSRTYEGNYSQY 344 (692)
Q Consensus 317 ~~l~~~~d~i~~l~~G~~~~~~G~y~~~ 344 (692)
+++..+||+++++++|++ ...|...++
T Consensus 202 ~~~~~~~d~v~~l~~G~i-~~~~~~~~~ 228 (254)
T PRK10418 202 GVVARLADDVAVMSHGRI-VEQGDVETL 228 (254)
T ss_pred HHHHHhCCEEEEEECCEE-EEecCHHHH
Confidence 999999999999999998 456665443
No 339
>COG4525 TauB ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=8.4e-40 Score=310.04 Aligned_cols=197 Identities=25% Similarity=0.360 Sum_probs=170.5
Q ss_pred CcEEEEeEEEEeCCee--ceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCC-----CceEEEEcc
Q 005532 96 SGVKLENISKSYKGVT--VLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKS-----NMKIAFLSQ 168 (692)
Q Consensus 96 ~~l~i~~ls~~y~~~~--vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~-----~~~i~~v~Q 168 (692)
+.+.+.+++.+|++++ +|+|+|++|.+||.++++||+||||||||++++|+++|+.|+|.+++. ...-|.|+|
T Consensus 2 ~~l~~~~~sl~y~g~~~~~le~vsL~ia~ge~vv~lGpSGcGKTTLLnl~AGf~~P~~G~i~l~~r~i~gPgaergvVFQ 81 (259)
T COG4525 2 CMLNVSHLSLSYEGKPRSALEDVSLTIASGELVVVLGPSGCGKTTLLNLIAGFVTPSRGSIQLNGRRIEGPGAERGVVFQ 81 (259)
T ss_pred ceeehhheEEecCCcchhhhhccceeecCCCEEEEEcCCCccHHHHHHHHhcCcCcccceEEECCEeccCCCccceeEec
Confidence 4588899999999877 999999999999999999999999999999999999999999998864 346799999
Q ss_pred cCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHHhhhcCC
Q 005532 169 EFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGF 248 (692)
Q Consensus 169 ~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl 248 (692)
++.+++.+|+.+|+..++.- . .++...-...+.+++..+|+
T Consensus 82 ~~~LlPWl~~~dNvafgL~l---------------~------------------------Gi~k~~R~~~a~q~l~~VgL 122 (259)
T COG4525 82 NEALLPWLNVIDNVAFGLQL---------------R------------------------GIEKAQRREIAHQMLALVGL 122 (259)
T ss_pred cCccchhhHHHHHHHHHHHh---------------c------------------------CCCHHHHHHHHHHHHHHhCc
Confidence 99999999999998644310 0 11111223456678888899
Q ss_pred CccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHH----ccCCCeEEEEecCHHHHHhhcC
Q 005532 249 TADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYL----GKQDVPMVIISHDRAFLDQLCT 324 (692)
Q Consensus 249 ~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L----~~~~~tvI~vsHd~~~l~~~~d 324 (692)
. +..++.+.+|||||||||.|||||+.+|++||||||+.+||+-+++.+.++| +..|+.+++||||++++.-+++
T Consensus 123 ~-~~~~~~i~qLSGGmrQRvGiARALa~eP~~LlLDEPfgAlDa~tRe~mQelLldlw~~tgk~~lliTH~ieEAlflat 201 (259)
T COG4525 123 E-GAEHKYIWQLSGGMRQRVGIARALAVEPQLLLLDEPFGALDALTREQMQELLLDLWQETGKQVLLITHDIEEALFLAT 201 (259)
T ss_pred c-cccccceEeecchHHHHHHHHHHhhcCcceEeecCchhhHHHHHHHHHHHHHHHHHHHhCCeEEEEeccHHHHHhhhh
Confidence 7 4558889999999999999999999999999999999999999999887765 5679999999999999999999
Q ss_pred eEEEEecc
Q 005532 325 KIVETEMG 332 (692)
Q Consensus 325 ~i~~l~~G 332 (692)
+++++..|
T Consensus 202 rLvvlsp~ 209 (259)
T COG4525 202 RLVVLSPG 209 (259)
T ss_pred eeEEecCC
Confidence 99999865
No 340
>COG0410 LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=3.1e-39 Score=316.61 Aligned_cols=207 Identities=27% Similarity=0.425 Sum_probs=169.9
Q ss_pred CcEEEEeEEEEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCCc-----------eEE
Q 005532 96 SGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSNM-----------KIA 164 (692)
Q Consensus 96 ~~l~i~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~~-----------~i~ 164 (692)
++++++|++..||...+|++|||++++||+++|+|+||+||||||++|+|+.+|.+|+|.++|.+. .|+
T Consensus 2 ~mL~v~~l~~~YG~~~~L~gvsl~v~~Geiv~llG~NGaGKTTlLkti~Gl~~~~~G~I~~~G~dit~~p~~~r~r~Gi~ 81 (237)
T COG0410 2 PMLEVENLSAGYGKIQALRGVSLEVERGEIVALLGRNGAGKTTLLKTIMGLVRPRSGRIIFDGEDITGLPPHERARLGIA 81 (237)
T ss_pred CceeEEeEeecccceeEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeeEEECCeecCCCCHHHHHhCCeE
Confidence 469999999999999999999999999999999999999999999999999999999999998643 599
Q ss_pred EEcccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHHhh
Q 005532 165 FLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMP 244 (692)
Q Consensus 165 ~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~ 244 (692)
||||.-.+|+.+||.||+..+....-.. .. ....+ +.+-++..
T Consensus 82 ~VPegR~iF~~LTVeENL~~g~~~~~~~------------~~--~~~~~-----------------------e~v~~lFP 124 (237)
T COG0410 82 YVPEGRRIFPRLTVEENLLLGAYARRDK------------EA--QERDL-----------------------EEVYELFP 124 (237)
T ss_pred eCcccccchhhCcHHHHHhhhhhccccc------------cc--ccccH-----------------------HHHHHHCh
Confidence 9999999999999999996432110000 00 00000 11112222
Q ss_pred hcCCCccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHH---c-cCCCeEEEEecCHHHHH
Q 005532 245 ELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYL---G-KQDVPMVIISHDRAFLD 320 (692)
Q Consensus 245 ~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L---~-~~~~tvI~vsHd~~~l~ 320 (692)
.| .+..+++..+|||||||.+||||||+.+|++|||||||.||-|.-.+.+.+.+ + +.+.||++|.++..++.
T Consensus 125 ~L---ker~~~~aG~LSGGEQQMLAiaRALm~~PklLLLDEPs~GLaP~iv~~I~~~i~~l~~~~g~tIlLVEQn~~~Al 201 (237)
T COG0410 125 RL---KERRNQRAGTLSGGEQQMLAIARALMSRPKLLLLDEPSEGLAPKIVEEIFEAIKELRKEGGMTILLVEQNARFAL 201 (237)
T ss_pred hH---HHHhcCcccCCChHHHHHHHHHHHHhcCCCEEEecCCccCcCHHHHHHHHHHHHHHHHcCCcEEEEEeccHHHHH
Confidence 21 24557788999999999999999999999999999999999999999988765 3 34779999999999999
Q ss_pred hhcCeEEEEecceEEEeccChHH
Q 005532 321 QLCTKIVETEMGVSRTYEGNYSQ 343 (692)
Q Consensus 321 ~~~d~i~~l~~G~~~~~~G~y~~ 343 (692)
+++||.++|++|++ .+.|.-.+
T Consensus 202 ~iaDr~yvle~Gri-v~~G~~~e 223 (237)
T COG0410 202 EIADRGYVLENGRI-VLSGTAAE 223 (237)
T ss_pred HhhCEEEEEeCCEE-EEecCHHH
Confidence 99999999999998 67887543
No 341
>CHL00131 ycf16 sulfate ABC transporter protein; Validated
Probab=100.00 E-value=3.4e-39 Score=334.19 Aligned_cols=213 Identities=20% Similarity=0.286 Sum_probs=171.7
Q ss_pred CcEEEEeEEEEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCC--CCCCccEEEECCCC-----------ce
Q 005532 96 SGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQ--EEPDSGNVIKAKSN-----------MK 162 (692)
Q Consensus 96 ~~l~i~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~--~~p~~G~I~~~~~~-----------~~ 162 (692)
++|+++|+++.|+++.+|+|+||+|++|++++|+|+||||||||+++|+|+ ++|++|+|.++|.. ..
T Consensus 6 ~~l~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 85 (252)
T CHL00131 6 PILEIKNLHASVNENEILKGLNLSINKGEIHAIMGPNGSGKSTLSKVIAGHPAYKILEGDILFKGESILDLEPEERAHLG 85 (252)
T ss_pred ceEEEEeEEEEeCCEEeeecceeEEcCCcEEEEECCCCCCHHHHHHHHcCCCcCcCCCceEEECCEEcccCChhhhheee
Confidence 369999999999988899999999999999999999999999999999998 58999999987632 14
Q ss_pred EEEEcccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHH
Q 005532 163 IAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKL 242 (692)
Q Consensus 163 i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l 242 (692)
++|++|++.+++..|+.+++...+.... ..... ..........++.++
T Consensus 86 ~~~~~q~~~~~~~~~~~~~l~~~~~~~~-----------~~~~~---------------------~~~~~~~~~~~~~~~ 133 (252)
T CHL00131 86 IFLAFQYPIEIPGVSNADFLRLAYNSKR-----------KFQGL---------------------PELDPLEFLEIINEK 133 (252)
T ss_pred EEEEeccccccccccHHHHHHHhhhhhh-----------ccccc---------------------ccccHHHHHHHHHHH
Confidence 8899999888777899888643211000 00000 000111233456678
Q ss_pred hhhcCCCccccccccc-cCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc---CCCeEEEEecCHHH
Q 005532 243 MPELGFTADDGDRLVA-SFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK---QDVPMVIISHDRAF 318 (692)
Q Consensus 243 l~~lgl~~~~~~~~~~-~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~---~~~tvI~vsHd~~~ 318 (692)
++.+|+.+...++++. .|||||+|||+|||||+.+|+||||||||++||+.+++++.++|++ .+.|||+||||+++
T Consensus 134 l~~~~l~~~~~~~~~~~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~~tH~~~~ 213 (252)
T CHL00131 134 LKLVGMDPSFLSRNVNEGFSGGEKKRNEILQMALLDSELAILDETDSGLDIDALKIIAEGINKLMTSENSIILITHYQRL 213 (252)
T ss_pred HHHcCCchhhhccccccCCCHHHHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHH
Confidence 8889986445677776 5999999999999999999999999999999999999999887753 48999999999999
Q ss_pred HHhh-cCeEEEEecceEEEeccCh
Q 005532 319 LDQL-CTKIVETEMGVSRTYEGNY 341 (692)
Q Consensus 319 l~~~-~d~i~~l~~G~~~~~~G~y 341 (692)
+..+ ||+++++++|++ .+.|..
T Consensus 214 ~~~~~~d~i~~l~~G~i-~~~~~~ 236 (252)
T CHL00131 214 LDYIKPDYVHVMQNGKI-IKTGDA 236 (252)
T ss_pred HHhhhCCEEEEEeCCEE-EEecCh
Confidence 9887 899999999998 456654
No 342
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.7e-39 Score=329.02 Aligned_cols=201 Identities=28% Similarity=0.452 Sum_probs=172.5
Q ss_pred eEEEEeEEEEcCCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccce--------eeeecc
Q 005532 424 VVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL--------PNYFEQ 495 (692)
Q Consensus 424 ~l~~~~l~~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~~--------~~~~~q 495 (692)
+|+++||+++|++.. .++||+|.+|+++||+||||||||||+++|+|+++|++|+|.++|.++. .+|++|
T Consensus 1 ~l~~~~l~~~~~~~~--~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~i~~~~q 78 (232)
T PRK10771 1 MLKLTDITWLYHHLP--MRFDLTVERGERVAILGPSGAGKSTLLNLIAGFLTPASGSLTLNGQDHTTTPPSRRPVSMLFQ 78 (232)
T ss_pred CeEEEEEEEEECCcc--ceeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCeecCcCChhhccEEEEec
Confidence 478999999998643 4999999999999999999999999999999999999999999987542 356665
Q ss_pred cchhhcCCCccHHHHHHHHhc-c-----ccHHHHHHHHhhcCCCcccccccCCCCCHHHHHHHHHHHHhccCCcEEEEeC
Q 005532 496 NQAEALDLDKTVLETVAEAAE-D-----WRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDE 569 (692)
Q Consensus 496 ~~~~~l~~~~tv~e~~~~~~~-~-----~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~LAral~~~p~lLlLDE 569 (692)
+ ..+.+..|+.+|+..... . +....+.++++.+|+. ...++++.+|||||||||+||||++.+|++|||||
T Consensus 79 ~--~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LS~G~~qrv~laral~~~p~lllLDE 155 (232)
T PRK10771 79 E--NNLFSHLTVAQNIGLGLNPGLKLNAAQREKLHAIARQMGIE-DLLARLPGQLSGGQRQRVALARCLVREQPILLLDE 155 (232)
T ss_pred c--cccccCCcHHHHHhcccccccCCCHHHHHHHHHHHHHcCcH-HHHhCCcccCCHHHHHHHHHHHHHhcCCCEEEEeC
Confidence 4 346667899999865321 1 1234578899999995 57899999999999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEECCEEEEecCChhHHHH
Q 005532 570 PTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYYLE 630 (692)
Q Consensus 570 PTn~LD~~~~~~l~~~l~~~----~~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~~~~~ 630 (692)
||++||+.+++.+.+.|.++ +.|||+||||++++..+||+|++|++|++. +.|+++++..
T Consensus 156 P~~gLD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~g~i~-~~g~~~~~~~ 219 (232)
T PRK10771 156 PFSALDPALRQEMLTLVSQVCQERQLTLLMVSHSLEDAARIAPRSLVVADGRIA-WDGPTDELLS 219 (232)
T ss_pred CcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEE-EeCCHHHHHh
Confidence 99999999999999988754 459999999999999999999999999997 5688877754
No 343
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.1e-39 Score=340.16 Aligned_cols=204 Identities=25% Similarity=0.375 Sum_probs=170.4
Q ss_pred eEEEEeEEEEcCCe-----ecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccce---------
Q 005532 424 VVTIKNLEFGYEDR-----LLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL--------- 489 (692)
Q Consensus 424 ~l~~~~l~~~y~~~-----~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~~--------- 489 (692)
.|+++|+++.|+++ .+|+++||+|++||++||+|+||||||||+++|+|+++|++|+|.++|.++.
T Consensus 6 ~l~i~nl~~~~~~~~~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~ 85 (289)
T PRK13645 6 DIILDNVSYTYAKKTPFEFKALNNTSLTFKKNKVTCVIGTTGSGKSTMIQLTNGLIISETGQTIVGDYAIPANLKKIKEV 85 (289)
T ss_pred eEEEEEEEEEeCCCCccccceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEccccccccccH
Confidence 48999999999764 4999999999999999999999999999999999999999999999886531
Q ss_pred ------eeeecccchhhcCCCccHHHHHHHHhcc--cc----HHHHHHHHhhcCCCcccccccCCCCCHHHHHHHHHHHH
Q 005532 490 ------PNYFEQNQAEALDLDKTVLETVAEAAED--WR----IDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKF 557 (692)
Q Consensus 490 ------~~~~~q~~~~~l~~~~tv~e~~~~~~~~--~~----~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~LAra 557 (692)
.+|++|+....+ ...|+.+|+...... .. ...+..+++.+++.....++++.+|||||||||+||||
T Consensus 86 ~~~~~~i~~v~q~~~~~~-~~~tv~enl~~~~~~~~~~~~~~~~~~~~ll~~~~L~~~~~~~~~~~LS~Gq~qrv~lara 164 (289)
T PRK13645 86 KRLRKEIGLVFQFPEYQL-FQETIEKDIAFGPVNLGENKQEAYKKVPELLKLVQLPEDYVKRSPFELSGGQKRRVALAGI 164 (289)
T ss_pred HHHhccEEEEEeCcchhh-hhhHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCChhHhcCChhhCCHHHHHHHHHHHH
Confidence 346666532222 245999998754221 11 13466788999995456789999999999999999999
Q ss_pred hccCCcEEEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEECCEEEEecCChhHHH
Q 005532 558 MVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYYL 629 (692)
Q Consensus 558 l~~~p~lLlLDEPTn~LD~~~~~~l~~~l~~~----~~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~~~~ 629 (692)
|+.+|+||||||||++||+.+++.+.+.|.++ +.|||+||||++++.++||+|++|++|++... |+.+++.
T Consensus 165 l~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~-g~~~~~~ 239 (289)
T PRK13645 165 IAMDGNTLVLDEPTGGLDPKGEEDFINLFERLNKEYKKRIIMVTHNMDQVLRIADEVIVMHEGKVISI-GSPFEIF 239 (289)
T ss_pred HHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEe-CCHHHHh
Confidence 99999999999999999999999999988764 46999999999999999999999999999854 6655543
No 344
>PRK13543 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=3.8e-39 Score=325.67 Aligned_cols=193 Identities=23% Similarity=0.405 Sum_probs=167.4
Q ss_pred CCCceEEEEeEEEEcCCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccce-------eee
Q 005532 420 SGRSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL-------PNY 492 (692)
Q Consensus 420 ~~~~~l~~~~l~~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~~-------~~~ 492 (692)
.++++|+++|++++|+++.+|+++||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.++. .+|
T Consensus 7 ~~~~~l~~~~l~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~i~~~~~~~~i~~ 86 (214)
T PRK13543 7 TAPPLLAAHALAFSRNEEPVFGPLDFHVDAGEALLVQGDNGAGKTTLLRVLAGLLHVESGQIQIDGKTATRGDRSRFMAY 86 (214)
T ss_pred CCcceEEEeeEEEecCCceeeecceEEECCCCEEEEEcCCCCCHHHHHHHHhCCCCCCCeeEEECCEEccchhhhhceEE
Confidence 3456899999999999888999999999999999999999999999999999999999999999986542 346
Q ss_pred ecccchhhcCCCccHHHHHHHHhcc--c-cHHHHHHHHhhcCCCcccccccCCCCCHHHHHHHHHHHHhccCCcEEEEeC
Q 005532 493 FEQNQAEALDLDKTVLETVAEAAED--W-RIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDE 569 (692)
Q Consensus 493 ~~q~~~~~l~~~~tv~e~~~~~~~~--~-~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~LAral~~~p~lLlLDE 569 (692)
+.|. +.+.+..|+.+|+...... . ....+.+++..+++. ...++++.+|||||||||+|||+++.+|+||||||
T Consensus 87 ~~q~--~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LS~G~~qrv~laral~~~p~llllDE 163 (214)
T PRK13543 87 LGHL--PGLKADLSTLENLHFLCGLHGRRAKQMPGSALAIVGLA-GYEDTLVRQLSAGQKKRLALARLWLSPAPLWLLDE 163 (214)
T ss_pred eecC--cccccCCcHHHHHHHHHHhcCCcHHHHHHHHHHHcCCh-hhccCChhhCCHHHHHHHHHHHHHhcCCCEEEEeC
Confidence 6554 3455667999998654221 1 223467889999995 55789999999999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhccEEEEEEC
Q 005532 570 PTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKG 615 (692)
Q Consensus 570 PTn~LD~~~~~~l~~~l~~~---~~tviivSHd~~~l~~~~d~i~~l~~ 615 (692)
||++||+.+++++.+.|.++ +.|||+||||.+++.++||++++|+.
T Consensus 164 Pt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~~~i~~l~~ 212 (214)
T PRK13543 164 PYANLDLEGITLVNRMISAHLRGGGAALVTTHGAYAAPPVRTRMLTLEA 212 (214)
T ss_pred CcccCCHHHHHHHHHHHHHHHhCCCEEEEEecChhhhhhhcceEEEEee
Confidence 99999999999999999765 57999999999999999999999874
No 345
>PRK14236 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.2e-39 Score=335.87 Aligned_cols=210 Identities=20% Similarity=0.286 Sum_probs=169.0
Q ss_pred CCcEEEEeEEEEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCC-----CCccEEEECCCC---------
Q 005532 95 SSGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEE-----PDSGNVIKAKSN--------- 160 (692)
Q Consensus 95 ~~~l~i~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~-----p~~G~I~~~~~~--------- 160 (692)
.+.|+++|++++|+++++|+|+||+|++|++++|+|+||||||||+++|+|+++ |++|+|.++|.+
T Consensus 23 ~~~l~~~nl~~~~~~~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~laGl~~~~~~~~~~G~i~i~g~~i~~~~~~~~ 102 (272)
T PRK14236 23 QTALEVRNLNLFYGDKQALFDISMRIPKNRVTAFIGPSGCGKSTLLRCFNRMNDLVDNCRIEGEIRLDGQNIYDKKVDVA 102 (272)
T ss_pred CcEEEEEEEEEEECCeeEeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHhcCCCccCCCCceEEEECCEECcccccCHH
Confidence 346999999999988889999999999999999999999999999999999987 489999987632
Q ss_pred ---ceEEEEcccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHH
Q 005532 161 ---MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDA 237 (692)
Q Consensus 161 ---~~i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (692)
..++|++|++.++.. |+.+|+...+.. ... ......+.
T Consensus 103 ~~~~~i~~v~q~~~l~~~-tv~enl~~~~~~---------------~~~-----------------------~~~~~~~~ 143 (272)
T PRK14236 103 ELRRRVGMVFQRPNPFPK-SIYENVVYGLRL---------------QGI-----------------------NNRRVLDE 143 (272)
T ss_pred HHhccEEEEecCCccCcc-cHHHHHHHHHHh---------------cCC-----------------------CcHHHHHH
Confidence 259999999887664 999998532110 000 00001122
Q ss_pred HHHHHhhhcCCCc---cccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc--CCCeEEEE
Q 005532 238 KVSKLMPELGFTA---DDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVII 312 (692)
Q Consensus 238 ~i~~ll~~lgl~~---~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~--~~~tvI~v 312 (692)
++.++++.+|+.+ ...++.+.+|||||||||+|||||+.+|+||||||||++||+.++.++.++|++ .+.|||+|
T Consensus 144 ~~~~~l~~~~l~~~~~~~~~~~~~~LS~Gq~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~~~tiiiv 223 (272)
T PRK14236 144 AVERSLRGAALWDEVKDRLHENAFGLSGGQQQRLVIARAIAIEPEVLLLDEPTSALDPISTLKIEELITELKSKYTIVIV 223 (272)
T ss_pred HHHHHHHHcCCChhHHHHhhCCcccCCHHHHHHHHHHHHHHCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCeEEEE
Confidence 3445555666532 245678899999999999999999999999999999999999999999887753 36899999
Q ss_pred ecCHHHHHhhcCeEEEEecceEEEeccChHHH
Q 005532 313 SHDRAFLDQLCTKIVETEMGVSRTYEGNYSQY 344 (692)
Q Consensus 313 sHd~~~l~~~~d~i~~l~~G~~~~~~G~y~~~ 344 (692)
||+++++..+||+|+++++|++. ..|...++
T Consensus 224 tH~~~~~~~~~d~i~~l~~G~i~-~~g~~~~~ 254 (272)
T PRK14236 224 THNMQQAARVSDYTAFMYMGKLV-EYGDTDTL 254 (272)
T ss_pred eCCHHHHHhhCCEEEEEECCEEE-ecCCHHHH
Confidence 99999999999999999999974 55665443
No 346
>COG4181 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=1.3e-39 Score=302.59 Aligned_cols=198 Identities=27% Similarity=0.438 Sum_probs=170.0
Q ss_pred cEEEEeEEEEeCC----eeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC------------
Q 005532 97 GVKLENISKSYKG----VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN------------ 160 (692)
Q Consensus 97 ~l~i~~ls~~y~~----~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~------------ 160 (692)
.|+++++++..+. ..||++|+|.|++||.++||||+||||||||-+++|+..|++|+|.+.|..
T Consensus 6 ii~~~~l~ktvg~~~~~l~IL~~V~L~v~~Ge~vaiVG~SGSGKSTLl~vlAGLd~~ssGeV~l~G~~L~~ldEd~rA~~ 85 (228)
T COG4181 6 IIEVHHLSKTVGQGEGELSILKGVELVVKRGETVAIVGPSGSGKSTLLAVLAGLDDPSSGEVRLLGQPLHKLDEDARAAL 85 (228)
T ss_pred eeehhhhhhhhcCCCcceeEeecceEEecCCceEEEEcCCCCcHHhHHHHHhcCCCCCCceEEEcCcchhhcCHHHHHHh
Confidence 5899999999865 359999999999999999999999999999999999999999999998742
Q ss_pred --ceEEEEcccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHH
Q 005532 161 --MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAK 238 (692)
Q Consensus 161 --~~i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (692)
..||||+|.+.+.+++|..||+..... +.. -........
T Consensus 86 R~~~vGfVFQSF~Lip~ltAlENV~lPle---------------L~g------------------------e~~~~~~~~ 126 (228)
T COG4181 86 RARHVGFVFQSFHLIPNLTALENVALPLE---------------LRG------------------------ESSADSRAG 126 (228)
T ss_pred hccceeEEEEeeeccccchhhhhccchhh---------------hcC------------------------CccccHHHH
Confidence 369999999999999999999863210 000 001223445
Q ss_pred HHHHhhhcCCCccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHH----ccCCCeEEEEec
Q 005532 239 VSKLMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYL----GKQDVPMVIISH 314 (692)
Q Consensus 239 i~~ll~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L----~~~~~tvI~vsH 314 (692)
..++|+.+|+. ..++.+|.+|||||||||+||||++..|+||+.||||-+||..+-+.+.++| ++.|.|.|+|||
T Consensus 127 A~~lL~~vGLg-~Rl~HyP~qLSGGEQQRVAiARAfa~~P~vLfADEPTGNLD~~Tg~~iaDLlF~lnre~G~TlVlVTH 205 (228)
T COG4181 127 AKALLEAVGLG-KRLTHYPAQLSGGEQQRVALARAFAGRPDVLFADEPTGNLDRATGDKIADLLFALNRERGTTLVLVTH 205 (228)
T ss_pred HHHHHHHhCcc-cccccCccccCchHHHHHHHHHHhcCCCCEEeccCCCCCcchhHHHHHHHHHHHHhhhcCceEEEEeC
Confidence 67889999997 5677889999999999999999999999999999999999999988887765 467999999999
Q ss_pred CHHHHHhhcCeEEEEecceEE
Q 005532 315 DRAFLDQLCTKIVETEMGVSR 335 (692)
Q Consensus 315 d~~~l~~~~d~i~~l~~G~~~ 335 (692)
|+....+ |+|++-+..|++.
T Consensus 206 D~~LA~R-c~R~~r~~~G~l~ 225 (228)
T COG4181 206 DPQLAAR-CDRQLRLRSGRLV 225 (228)
T ss_pred CHHHHHh-hhheeeeecceec
Confidence 9998876 9999999999863
No 347
>TIGR03740 galliderm_ABC gallidermin-class lantibiotic protection ABC transporter, ATP-binding subunit. Model TIGR03731 represents the family of all lantibiotics related to gallidermin, including epidermin, mutatin, and nisin. This protein family describes the ATP-binding subunit of a gallidermin/epidermin class lantibiotic protection transporter. It is largely restricted to gallidermin-family lantibiotic biosynthesis and export cassettes, but also occurs in orphan transporter cassettes in species that lack candidate lantibiotic precursor and synthetase genes.
Probab=100.00 E-value=4.7e-39 Score=327.05 Aligned_cols=196 Identities=29% Similarity=0.377 Sum_probs=170.5
Q ss_pred EEEEeEEEEcCCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccce------eeeecccch
Q 005532 425 VTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL------PNYFEQNQA 498 (692)
Q Consensus 425 l~~~~l~~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~~------~~~~~q~~~ 498 (692)
|+++|+++.|+++++|+++||+|++||++||+|+||||||||+++|+|+++|++|+|.++|.++. .+|++|.
T Consensus 1 l~l~~v~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~~~~~~~~~~~~~~~~~q~-- 78 (223)
T TIGR03740 1 LETKNLSKRFGKQTAVNNISLTVPKNSVYGLLGPNGAGKSTLLKMITGILRPTSGEIIFDGHPWTRKDLHKIGSLIES-- 78 (223)
T ss_pred CEEEeEEEEECCEEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEeccccccccEEEEcCC--
Confidence 47899999999889999999999999999999999999999999999999999999999886542 3455554
Q ss_pred hhcCCCccHHHHHHHHhc--cccHHHHHHHHhhcCCCcccccccCCCCCHHHHHHHHHHHHhccCCcEEEEeCCCCCCCH
Q 005532 499 EALDLDKTVLETVAEAAE--DWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDI 576 (692)
Q Consensus 499 ~~l~~~~tv~e~~~~~~~--~~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~LAral~~~p~lLlLDEPTn~LD~ 576 (692)
..+.+..|+.+|+..... ......+.++++.+|+. +..++++.+|||||+||++||||++.+|++|||||||++||+
T Consensus 79 ~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LS~G~~~rv~laral~~~p~llllDEP~~~LD~ 157 (223)
T TIGR03740 79 PPLYENLTARENLKVHTTLLGLPDSRIDEVLNIVDLT-NTGKKKAKQFSLGMKQRLGIAIALLNHPKLLILDEPTNGLDP 157 (223)
T ss_pred CCccccCCHHHHHHHHHHHcCCCHHHHHHHHHHcCCc-HHHhhhHhhCCHHHHHHHHHHHHHhcCCCEEEECCCccCCCH
Confidence 345567899999865322 22345678899999995 567889999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhc---CceEEEEecCHHHHHhhccEEEEEECCEEEEecCC
Q 005532 577 PSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGD 624 (692)
Q Consensus 577 ~~~~~l~~~l~~~---~~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~ 624 (692)
.+++.+.++|.++ +.|||+||||.+++..+||+|++|++|++.. .|+
T Consensus 158 ~~~~~l~~~L~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~g~i~~-~~~ 207 (223)
T TIGR03740 158 IGIQELRELIRSFPEQGITVILSSHILSEVQQLADHIGIISEGVLGY-QGK 207 (223)
T ss_pred HHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHHhcCEEEEEeCCEEEE-ecC
Confidence 9999999999865 3599999999999999999999999999975 354
No 348
>PRK14244 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6e-39 Score=332.17 Aligned_cols=207 Identities=19% Similarity=0.303 Sum_probs=167.6
Q ss_pred EEEEeEEEEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCC-----CCccEEEECCCC------------
Q 005532 98 VKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEE-----PDSGNVIKAKSN------------ 160 (692)
Q Consensus 98 l~i~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~-----p~~G~I~~~~~~------------ 160 (692)
-+++|+++.|+++++|+|+||+|++|++++|+|+||||||||+++|+|+++ |++|+|.++|..
T Consensus 6 ~~~~~l~~~~~~~~~l~~is~~i~~Ge~~~I~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~ 85 (251)
T PRK14244 6 ASVKNLNLWYGSKQILFDINLDIYKREVTAFIGPSGCGKSTFLRCFNRMNDFVPNCKVKGELDIDGIDVYSVDTNVVLLR 85 (251)
T ss_pred EEeeeEEEEECCeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCcceEEEECCEehHhcccchHHHh
Confidence 578999999998889999999999999999999999999999999999986 479999998732
Q ss_pred ceEEEEcccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHH
Q 005532 161 MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVS 240 (692)
Q Consensus 161 ~~i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 240 (692)
..++|++|++.+++ .|+.+|+..... ..... .........+.
T Consensus 86 ~~i~~v~q~~~~~~-~tv~~ni~~~~~---------------~~~~~----------------------~~~~~~~~~~~ 127 (251)
T PRK14244 86 AKVGMVFQKPNPFP-KSIYDNVAYGPK---------------LHGLA----------------------KNKKKLDEIVE 127 (251)
T ss_pred hhEEEEecCccccc-CCHHHHHHHHHH---------------hcCCC----------------------CCHHHHHHHHH
Confidence 25999999987765 499999852210 00000 00011223455
Q ss_pred HHhhhcCCCc---cccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc--CCCeEEEEecC
Q 005532 241 KLMPELGFTA---DDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVIISHD 315 (692)
Q Consensus 241 ~ll~~lgl~~---~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~--~~~tvI~vsHd 315 (692)
++++.+|+.+ ...++++.+|||||||||+|||||+.+|+||||||||++||+.+++.+.+.|++ .++|||+||||
T Consensus 128 ~~l~~~~l~~~~~~~~~~~~~~LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiiisH~ 207 (251)
T PRK14244 128 KSLTSVGLWEELGDRLKDSAFELSGGQQQRLCIARAIAVKPTMLLMDEPCSALDPVATNVIENLIQELKKNFTIIVVTHS 207 (251)
T ss_pred HHHHHcCCCchhhhHhhcChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCC
Confidence 6777888753 135677899999999999999999999999999999999999999999887753 37899999999
Q ss_pred HHHHHhhcCeEEEEecceEEEeccChHH
Q 005532 316 RAFLDQLCTKIVETEMGVSRTYEGNYSQ 343 (692)
Q Consensus 316 ~~~l~~~~d~i~~l~~G~~~~~~G~y~~ 343 (692)
++++..+||+|+++++|++. +.|...+
T Consensus 208 ~~~~~~~~d~i~~l~~G~i~-~~~~~~~ 234 (251)
T PRK14244 208 MKQAKKVSDRVAFFQSGRIV-EYNTTQE 234 (251)
T ss_pred HHHHHhhcCEEEEEECCEEE-EeCCHHH
Confidence 99999999999999999984 4565433
No 349
>PRK14261 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7e-39 Score=332.06 Aligned_cols=209 Identities=22% Similarity=0.286 Sum_probs=167.6
Q ss_pred CCcEEEEeEEEEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCC--C---CccEEEECCCC---------
Q 005532 95 SSGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEE--P---DSGNVIKAKSN--------- 160 (692)
Q Consensus 95 ~~~l~i~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~--p---~~G~I~~~~~~--------- 160 (692)
.++|+++|++++|+++++|+|+||+|++|++++|+||||||||||+++|+|+++ | ++|+|.++|.+
T Consensus 4 ~~~i~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~ 83 (253)
T PRK14261 4 EIILSTKNLNLWYGEKHALYDITISIPKNRVTALIGPSGCGKSTLLRCFNRMNDLIPGCRITGDILYNGENIMDSGADVV 83 (253)
T ss_pred cceEEEeeeEEEECCeeeeeeeEEEECCCcEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEccccccchh
Confidence 346999999999998899999999999999999999999999999999999975 3 48999988632
Q ss_pred ---ceEEEEcccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHH
Q 005532 161 ---MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDA 237 (692)
Q Consensus 161 ---~~i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (692)
..|+|++|++.++. .||++|+...... .. ..+....+.
T Consensus 84 ~~~~~i~~~~q~~~~~~-~tv~eni~~~~~~---------------~~-----------------------~~~~~~~~~ 124 (253)
T PRK14261 84 ALRRKIGMVFQRPNPFP-KSIYENVAYGPRI---------------HG-----------------------EKNKKTLDT 124 (253)
T ss_pred hhhceEEEEecCCccCc-ccHHHHHHhhHHh---------------cC-----------------------CCCHHHHHH
Confidence 24999999988765 5999998522100 00 000011223
Q ss_pred HHHHHhhhcCCCc---cccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc--CCCeEEEE
Q 005532 238 KVSKLMPELGFTA---DDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVII 312 (692)
Q Consensus 238 ~i~~ll~~lgl~~---~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~--~~~tvI~v 312 (692)
.+.++++.+++.+ ...++++.+||||||||++|||||+.+|++|||||||++||+.+++++.++|++ .++|||++
T Consensus 125 ~~~~~l~~~~l~~~l~~~~~~~~~~LS~G~~qrv~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~tvii~ 204 (253)
T PRK14261 125 IVEKSLKGAALWDEVKDRLHDSALSLSGGQQQRLCIARTLAVNPEVILMDEPCSALDPIATAKIEDLIEDLKKEYTVIIV 204 (253)
T ss_pred HHHHHHHHhcCchhhHHHhhcChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhhCceEEEE
Confidence 3445556665531 235778999999999999999999999999999999999999999999887753 36899999
Q ss_pred ecCHHHHHhhcCeEEEEecceEEEeccChHH
Q 005532 313 SHDRAFLDQLCTKIVETEMGVSRTYEGNYSQ 343 (692)
Q Consensus 313 sHd~~~l~~~~d~i~~l~~G~~~~~~G~y~~ 343 (692)
||+++++..+||+++++++|++. ..|...+
T Consensus 205 sh~~~~~~~~~d~v~~l~~G~i~-~~g~~~~ 234 (253)
T PRK14261 205 THNMQQAARVSDYTGFMYLGKLI-EFDKTTQ 234 (253)
T ss_pred EcCHHHHHhhCCEEEEEECCEEE-EcCCHHH
Confidence 99999999999999999999984 4565443
No 350
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.4e-39 Score=332.86 Aligned_cols=204 Identities=26% Similarity=0.372 Sum_probs=171.4
Q ss_pred CceEEEEeEEEEcCCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCC-----CCeeEEEECCccce-------
Q 005532 422 RSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEK-----PRGGEVLLGEHNVL------- 489 (692)
Q Consensus 422 ~~~l~~~~l~~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~-----p~~G~i~~~~~~~~------- 489 (692)
.++|+++||+++|+++.+|+++||+|++|+++||+|+||||||||+++|+|+.. |++|+|.++|.++.
T Consensus 4 ~~~l~~~~l~~~~~~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 83 (253)
T PRK14242 4 PPKMEARGLSFFYGDFQALHDISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARVEGEILLDGENIYDPHVDVV 83 (253)
T ss_pred CcEEEEeeeEEEECCeeeecceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCCceEEEECCEEccccccCHH
Confidence 356999999999998889999999999999999999999999999999999864 68999999886542
Q ss_pred -----eeeecccchhhcCCCccHHHHHHHHhc---cc----cHHHHHHHHhhcCCCc---ccccccCCCCCHHHHHHHHH
Q 005532 490 -----PNYFEQNQAEALDLDKTVLETVAEAAE---DW----RIDDIKGLLGRCNFKA---DMLDRKVSLLSGGEKARLAF 554 (692)
Q Consensus 490 -----~~~~~q~~~~~l~~~~tv~e~~~~~~~---~~----~~~~~~~~L~~~~l~~---~~~~~~~~~LSgGqkqrv~L 554 (692)
.+|++|+. .+.+ .|+.+|+..... .+ ....+..+++.+++.. ...++++.+|||||||||+|
T Consensus 84 ~~~~~i~~v~q~~--~~~~-~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LSgGq~qrv~l 160 (253)
T PRK14242 84 ELRRRVGMVFQKP--NPFP-KSIFENVAYGLRVNGVKDKAYLAERVERSLRHAALWDEVKDRLHESALGLSGGQQQRLCI 160 (253)
T ss_pred HHhhcEEEEecCC--CCCc-CcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCchhhhHHhhCCcccCCHHHHHHHHH
Confidence 34666643 3444 599999875421 11 1235677888888842 24578899999999999999
Q ss_pred HHHhccCCcEEEEeCCCCCCCHHHHHHHHHHHHhcC--ceEEEEecCHHHHHhhccEEEEEECCEEEEecCChhHHH
Q 005532 555 CKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEYK--GTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYYL 629 (692)
Q Consensus 555 Aral~~~p~lLlLDEPTn~LD~~~~~~l~~~l~~~~--~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~~~~ 629 (692)
||||+.+|+||||||||++||+.++.++.+.|+++. .|||+||||.+++.++||+|++|++|++.. .|..+++.
T Consensus 161 aral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tvii~tH~~~~~~~~~d~v~~l~~G~i~~-~g~~~~~~ 236 (253)
T PRK14242 161 ARALAVEPEVLLMDEPASALDPIATQKIEELIHELKARYTIIIVTHNMQQAARVSDVTAFFYMGKLIE-VGPTEQIF 236 (253)
T ss_pred HHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCeEEEEEecHHHHHHhCCEEEEEECCEEEE-eCCHHHHH
Confidence 999999999999999999999999999999998763 599999999999999999999999999974 46666554
No 351
>cd03245 ABCC_bacteriocin_exporters ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.
Probab=100.00 E-value=2.6e-39 Score=328.21 Aligned_cols=200 Identities=29% Similarity=0.503 Sum_probs=154.6
Q ss_pred cEEEEeEEEEeCC--eeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC----------ceEE
Q 005532 97 GVKLENISKSYKG--VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN----------MKIA 164 (692)
Q Consensus 97 ~l~i~~ls~~y~~--~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~----------~~i~ 164 (692)
.|+++|+++.|++ +++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.. ..++
T Consensus 2 ~l~~~~l~~~~~~~~~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 81 (220)
T cd03245 2 RIEFRNVSFSYPNQEIPALDNVSLTIRAGEKVAIIGRVGSGKSTLLKLLAGLYKPTSGSVLLDGTDIRQLDPADLRRNIG 81 (220)
T ss_pred eEEEEEEEEEcCCCCcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCeEEECCEEhHHCCHHHHHhhEE
Confidence 3889999999976 569999999999999999999999999999999999999999999998742 2599
Q ss_pred EEcccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHHhh
Q 005532 165 FLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMP 244 (692)
Q Consensus 165 ~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~ 244 (692)
|++|++.+++ .|+.||+....... . . ..+...++ . . .+. +.++
T Consensus 82 ~~~q~~~~~~-~tv~e~l~~~~~~~-~-~---~~~~~~l~--------------~----------~---~l~----~~~~ 124 (220)
T cd03245 82 YVPQDVTLFY-GTLRDNITLGAPLA-D-D---ERILRAAE--------------L----------A---GVT----DFVN 124 (220)
T ss_pred EeCCCCcccc-chHHHHhhcCCCCC-C-H---HHHHHHHH--------------H----------c---CcH----HHHH
Confidence 9999997765 69999975321000 0 0 00000000 0 0 001 1111
Q ss_pred hc--CCCccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHccC--CCeEEEEecCHHHHH
Q 005532 245 EL--GFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGKQ--DVPMVIISHDRAFLD 320 (692)
Q Consensus 245 ~l--gl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~~--~~tvI~vsHd~~~l~ 320 (692)
.+ |+... ....+.+||||||||++|||||+.+|++|||||||+|||+.++.++.++|++. +.|||+||||++++
T Consensus 125 ~~~~~~~~~-~~~~~~~LSgG~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~- 202 (220)
T cd03245 125 KHPNGLDLQ-IGERGRGLSGGQRQAVALARALLNDPPILLLDEPTSAMDMNSEERLKERLRQLLGDKTLIIITHRPSLL- 202 (220)
T ss_pred hccccccce-ecCCCccCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHH-
Confidence 11 22211 23446899999999999999999999999999999999999999999888642 47999999999987
Q ss_pred hhcCeEEEEecceEE
Q 005532 321 QLCTKIVETEMGVSR 335 (692)
Q Consensus 321 ~~~d~i~~l~~G~~~ 335 (692)
.+||+|+++++|++.
T Consensus 203 ~~~d~v~~l~~g~i~ 217 (220)
T cd03245 203 DLVDRIIVMDSGRIV 217 (220)
T ss_pred HhCCEEEEEeCCeEe
Confidence 699999999999874
No 352
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.7e-39 Score=330.71 Aligned_cols=203 Identities=25% Similarity=0.346 Sum_probs=173.1
Q ss_pred eEEEEeEEEEcCCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCC-----CeeEEEECCccce---------
Q 005532 424 VVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKP-----RGGEVLLGEHNVL--------- 489 (692)
Q Consensus 424 ~l~~~~l~~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p-----~~G~i~~~~~~~~--------- 489 (692)
+|+++||++.|+++.+|+++||+|++|+++||+|+||||||||+++|+|+++| ++|+|.++|.++.
T Consensus 3 ~l~~~~l~~~~~~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~ 82 (250)
T PRK14247 3 KIEIRDLKVSFGQVEVLDGVNLEIPDNTITALMGPSGSGKSTLLRVFNRLIELYPEARVSGEVYLDGQDIFKMDVIELRR 82 (250)
T ss_pred eEEEEeeEEEECCeeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCCCCceEEEECCEECCcCCHHHHhc
Confidence 58999999999988899999999999999999999999999999999999974 7999999987542
Q ss_pred -eeeecccchhhcCCCccHHHHHHHHhc--cc--c----HHHHHHHHhhcCCCc---ccccccCCCCCHHHHHHHHHHHH
Q 005532 490 -PNYFEQNQAEALDLDKTVLETVAEAAE--DW--R----IDDIKGLLGRCNFKA---DMLDRKVSLLSGGEKARLAFCKF 557 (692)
Q Consensus 490 -~~~~~q~~~~~l~~~~tv~e~~~~~~~--~~--~----~~~~~~~L~~~~l~~---~~~~~~~~~LSgGqkqrv~LAra 557 (692)
.+|++|+. .+.+..|+.+|+..... .+ . ...+.++++.+++.. ...++++.+|||||||||+||||
T Consensus 83 ~i~~v~q~~--~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LSgG~~qrv~lara 160 (250)
T PRK14247 83 RVQMVFQIP--NPIPNLSIFENVALGLKLNRLVKSKKELQERVRWALEKAQLWDEVKDRLDAPAGKLSGGQQQRLCIARA 160 (250)
T ss_pred cEEEEeccC--ccCCCCcHHHHHHHHHHhccccCCHHHHHHHHHHHHHHcCCCcchhhhhcCCcccCCHHHHHHHHHHHH
Confidence 34666653 35567899999875321 11 1 234678899999842 34688999999999999999999
Q ss_pred hccCCcEEEEeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhccEEEEEECCEEEEecCChhHHH
Q 005532 558 MVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY--KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYYL 629 (692)
Q Consensus 558 l~~~p~lLlLDEPTn~LD~~~~~~l~~~l~~~--~~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~~~~ 629 (692)
|+.+|+||||||||++||+.++.++.+.|+++ +.|||+||||++++..+||+|++|++|++.. .|+.+++.
T Consensus 161 l~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~-~g~~~~~~ 233 (250)
T PRK14247 161 LAFQPEVLLADEPTANLDPENTAKIESLFLELKKDMTIVLVTHFPQQAARISDYVAFLYKGQIVE-WGPTREVF 233 (250)
T ss_pred HhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCeEEE-ECCHHHHH
Confidence 99999999999999999999999999999875 3599999999999999999999999999974 57766654
No 353
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.2e-39 Score=336.18 Aligned_cols=205 Identities=26% Similarity=0.400 Sum_probs=174.1
Q ss_pred ceEEEEeEEEEcC-CeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccce----------ee
Q 005532 423 SVVTIKNLEFGYE-DRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL----------PN 491 (692)
Q Consensus 423 ~~l~~~~l~~~y~-~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~~----------~~ 491 (692)
.+++++|++++|+ .+.+|+++||+|++||++||+|+||||||||+++|+|+++|++|+|.++|.++. .+
T Consensus 2 ~~l~~~~l~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~ 81 (277)
T PRK13652 2 HLIETRDLCYSYSGSKEALNNINFIAPRNSRIAVIGPNGAGKSTLFRHFNGILKPTSGSVLIRGEPITKENIREVRKFVG 81 (277)
T ss_pred ceEEEEEEEEEeCCCCceeeEeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhheE
Confidence 3689999999996 457999999999999999999999999999999999999999999999886542 35
Q ss_pred eecccchhhcCCCccHHHHHHHHhc--ccc----HHHHHHHHhhcCCCcccccccCCCCCHHHHHHHHHHHHhccCCcEE
Q 005532 492 YFEQNQAEALDLDKTVLETVAEAAE--DWR----IDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLL 565 (692)
Q Consensus 492 ~~~q~~~~~l~~~~tv~e~~~~~~~--~~~----~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~LAral~~~p~lL 565 (692)
|++|+....+ ...|+.+|+..... ... ...+.++++.+++. +..++++..||||||||++|||||+.+|+||
T Consensus 82 ~v~q~~~~~~-~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LS~Gq~qrl~laraL~~~p~ll 159 (277)
T PRK13652 82 LVFQNPDDQI-FSPTVEQDIAFGPINLGLDEETVAHRVSSALHMLGLE-ELRDRVPHHLSGGEKKRVAIAGVIAMEPQVL 159 (277)
T ss_pred EEecCccccc-ccccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHCCCh-hHhcCCcccCCHHHHHHHHHHHHHHcCCCEE
Confidence 6666532222 35799999875322 111 13467889999995 6689999999999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEECCEEEEecCChhHHHH
Q 005532 566 VLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYYLE 630 (692)
Q Consensus 566 lLDEPTn~LD~~~~~~l~~~l~~~----~~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~~~~~ 630 (692)
||||||++||+.++..+.+.|+++ +.|||+||||++++.++||||++|++|+++ +.|..+++..
T Consensus 160 ilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~~~~~~drv~~l~~G~i~-~~g~~~~~~~ 227 (277)
T PRK13652 160 VLDEPTAGLDPQGVKELIDFLNDLPETYGMTVIFSTHQLDLVPEMADYIYVMDKGRIV-AYGTVEEIFL 227 (277)
T ss_pred EEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEE-EECCHHHHhc
Confidence 999999999999999999998754 469999999999999999999999999998 4587777654
No 354
>PRK10261 glutathione transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.8e-39 Score=372.72 Aligned_cols=210 Identities=21% Similarity=0.351 Sum_probs=175.8
Q ss_pred CCcEEEEeEEEEeCC-----------eeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC---
Q 005532 95 SSGVKLENISKSYKG-----------VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN--- 160 (692)
Q Consensus 95 ~~~l~i~~ls~~y~~-----------~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~--- 160 (692)
.++|+++|+++.|+. ..+|+||||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|..
T Consensus 311 ~~~L~~~~l~~~y~~~~~~~~~~~~~~~~l~~vs~~i~~Ge~~~lvG~nGsGKSTLlk~i~Gl~~p~~G~I~~~g~~i~~ 390 (623)
T PRK10261 311 EPILQVRNLVTRFPLRSGLLNRVTREVHAVEKVSFDLWPGETLSLVGESGSGKSTTGRALLRLVESQGGEIIFNGQRIDT 390 (623)
T ss_pred CceEEEeeeEEEEcCCCccccccCCceEEEeeeEeEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCCcEEEECCEECCc
Confidence 357999999999962 469999999999999999999999999999999999999999999998742
Q ss_pred ----------ceEEEEcccC--ccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHh
Q 005532 161 ----------MKIAFLSQEF--EVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQ 228 (692)
Q Consensus 161 ----------~~i~~v~Q~~--~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (692)
..|+|++|++ .+++..||.+|+...+.. ..
T Consensus 391 ~~~~~~~~~~~~i~~v~Q~~~~~l~~~~tv~~~l~~~~~~---------------~~----------------------- 432 (623)
T PRK10261 391 LSPGKLQALRRDIQFIFQDPYASLDPRQTVGDSIMEPLRV---------------HG----------------------- 432 (623)
T ss_pred CCHHHHHHhcCCeEEEecCchhhcCCCCCHHHHHHHHHHH---------------cC-----------------------
Confidence 2599999997 466788999998532100 00
Q ss_pred hcCcccHHHHHHHHhhhcCCCccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHc----c
Q 005532 229 AVNLDTLDAKVSKLMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG----K 304 (692)
Q Consensus 229 ~~~~~~~~~~i~~ll~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~----~ 304 (692)
.........++.++|+.+|+.....++++.+|||||||||+|||||+.+|+||||||||++||+.++..+.++|+ +
T Consensus 433 ~~~~~~~~~~~~~~L~~~gL~~~~~~~~~~~LSgGqrQRv~iAraL~~~p~llllDEPts~LD~~~~~~i~~ll~~l~~~ 512 (623)
T PRK10261 433 LLPGKAAAARVAWLLERVGLLPEHAWRYPHEFSGGQRQRICIARALALNPKVIIADEAVSALDVSIRGQIINLLLDLQRD 512 (623)
T ss_pred CCCHHHHHHHHHHHHHHcCCCHHHhhCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHh
Confidence 000112235677889999996456789999999999999999999999999999999999999999999988873 3
Q ss_pred CCCeEEEEecCHHHHHhhcCeEEEEecceEEEeccChHH
Q 005532 305 QDVPMVIISHDRAFLDQLCTKIVETEMGVSRTYEGNYSQ 343 (692)
Q Consensus 305 ~~~tvI~vsHd~~~l~~~~d~i~~l~~G~~~~~~G~y~~ 343 (692)
.+.|||+||||++++..+||+|++|.+|++. ..|...+
T Consensus 513 ~g~tvi~isHdl~~v~~~~dri~vl~~G~iv-~~g~~~~ 550 (623)
T PRK10261 513 FGIAYLFISHDMAVVERISHRVAVMYLGQIV-EIGPRRA 550 (623)
T ss_pred cCCEEEEEeCCHHHHHHhCCEEEEEECCEEE-EecCHHH
Confidence 5899999999999999999999999999984 5566544
No 355
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]
Probab=100.00 E-value=4e-39 Score=353.82 Aligned_cols=208 Identities=27% Similarity=0.425 Sum_probs=177.4
Q ss_pred CCCcEEEEeEEEEeCC-----------eeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC--
Q 005532 94 ISSGVKLENISKSYKG-----------VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN-- 160 (692)
Q Consensus 94 ~~~~l~i~~ls~~y~~-----------~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~-- 160 (692)
..+.++++|+++.|.. ..+++||||.|.+||++||||++|||||||.++|+|+++|++|+|.++|.+
T Consensus 277 ~~~ll~V~~l~k~y~~~~~~~~~~~~~~~Av~~VSf~l~~GE~lglVGeSGsGKSTlar~i~gL~~P~~G~i~~~g~~~~ 356 (539)
T COG1123 277 AEPLLSVRNLSKRYGSRKGLFVRERGEVKAVDDVSFDLREGETLGLVGESGSGKSTLARILAGLLPPSSGSIIFDGQDLD 356 (539)
T ss_pred cCceeEeeeeeeeeccccccccccccceeeeeeeeeEecCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEEeCcccc
Confidence 4678999999999973 248999999999999999999999999999999999999999999998753
Q ss_pred ----------ceEEEEcccCc--cCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHh
Q 005532 161 ----------MKIAFLSQEFE--VSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQ 228 (692)
Q Consensus 161 ----------~~i~~v~Q~~~--~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (692)
.++-+++|+|. +.+..||.+++...+.- . .
T Consensus 357 ~~~~~~~~~r~~~QmvFQdp~~SLnPr~tV~~~i~epL~~---------------~-----------------------~ 398 (539)
T COG1123 357 LTGGELRRLRRRIQMVFQDPYSSLNPRMTVGDILAEPLRI---------------H-----------------------G 398 (539)
T ss_pred cccchhhhhhhheEEEEeCcccccCccccHHHHHHhHHhh---------------h-----------------------c
Confidence 35788889874 56778999987532210 0 0
Q ss_pred hcCcccHHHHHHHHhhhcCCCccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHc----c
Q 005532 229 AVNLDTLDAKVSKLMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG----K 304 (692)
Q Consensus 229 ~~~~~~~~~~i~~ll~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~----~ 304 (692)
........+++.++|+.+|+++..+++++.+|||||||||+|||||+.+|++||+|||||+||+.....+.++|+ +
T Consensus 399 ~~~~~~~~~rv~~ll~~VgL~~~~l~ryP~elSGGQrQRvaIARALa~~P~lli~DEp~SaLDvsvqa~VlnLl~~lq~e 478 (539)
T COG1123 399 GGSGAERRARVAELLELVGLPPEFLDRYPHELSGGQRQRVAIARALALEPKLLILDEPVSALDVSVQAQVLNLLKDLQEE 478 (539)
T ss_pred ccchHHHHHHHHHHHHHcCCCHHHHhcCchhcCcchhHHHHHHHHHhcCCCEEEecCCccccCHHHHHHHHHHHHHHHHH
Confidence 001123345788999999999878999999999999999999999999999999999999999999999888764 4
Q ss_pred CCCeEEEEecCHHHHHhhcCeEEEEecceEEEeccC
Q 005532 305 QDVPMVIISHDRAFLDQLCTKIVETEMGVSRTYEGN 340 (692)
Q Consensus 305 ~~~tvI~vsHd~~~l~~~~d~i~~l~~G~~~~~~G~ 340 (692)
.|.|+||||||+.++.++||+|++|.+|++. -.|+
T Consensus 479 ~g~t~lfISHDl~vV~~i~drv~vm~~G~iV-E~G~ 513 (539)
T COG1123 479 LGLTYLFISHDLAVVRYIADRVAVMYDGRIV-EEGP 513 (539)
T ss_pred hCCEEEEEeCCHHHHHhhCceEEEEECCeEE-EeCC
Confidence 6999999999999999999999999999985 4454
No 356
>PRK14248 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.2e-39 Score=333.94 Aligned_cols=206 Identities=26% Similarity=0.399 Sum_probs=171.3
Q ss_pred CCCceEEEEeEEEEcCCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCC-----CCeeEEEECCccce-----
Q 005532 420 SGRSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEK-----PRGGEVLLGEHNVL----- 489 (692)
Q Consensus 420 ~~~~~l~~~~l~~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~-----p~~G~i~~~~~~~~----- 489 (692)
++.++|+++|++++|+++.+|+++||+|++||++||+|+||||||||+++|+|+.+ |++|+|.++|.++.
T Consensus 17 ~~~~~l~~~~l~~~~~~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~ 96 (268)
T PRK14248 17 AKEHILEVKDLSIYYGEKRAVNDISMDIEKHAVTALIGPSGCGKSTFLRSINRMNDLIPSARSEGEILYEGLNILDSNIN 96 (268)
T ss_pred CCCceEEEEEEEEEeCCceeeeceEEEEcCCCEEEEECCCCCCHHHHHHHHHhcccccCCCCCceEEEECCEEccccccc
Confidence 34468999999999998889999999999999999999999999999999999864 78999999886542
Q ss_pred -------eeeecccchhhcCCCccHHHHHHHHhcc---cc----HHHHHHHHhhcCCCc---ccccccCCCCCHHHHHHH
Q 005532 490 -------PNYFEQNQAEALDLDKTVLETVAEAAED---WR----IDDIKGLLGRCNFKA---DMLDRKVSLLSGGEKARL 552 (692)
Q Consensus 490 -------~~~~~q~~~~~l~~~~tv~e~~~~~~~~---~~----~~~~~~~L~~~~l~~---~~~~~~~~~LSgGqkqrv 552 (692)
.+|++|+. .+.+ .|+.+|+...... .. ...+..+++.+++.. ...++++.+|||||||||
T Consensus 97 ~~~~~~~i~~v~q~~--~~~~-~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LSgGq~qrl 173 (268)
T PRK14248 97 VVNLRREIGMVFQKP--NPFP-KSIYNNITHALKYAGERRKSVLDEIVEESLTKAALWDEVKDRLHSSALSLSGGQQQRL 173 (268)
T ss_pred HHHHhccEEEEecCC--ccCc-ccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCCcchHHHHhcCcccCCHHHHHHH
Confidence 34666543 3434 5999998754211 11 123567788888742 346788999999999999
Q ss_pred HHHHHhccCCcEEEEeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhccEEEEEECCEEEEecCChhHHH
Q 005532 553 AFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY--KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYYL 629 (692)
Q Consensus 553 ~LAral~~~p~lLlLDEPTn~LD~~~~~~l~~~l~~~--~~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~~~~ 629 (692)
+|||||+.+|++|||||||++||+.+++.+.+.|+++ +.|||+||||++++..+||+|++|++|++.. .|..+++.
T Consensus 174 ~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~G~i~~-~~~~~~~~ 251 (268)
T PRK14248 174 CIARTLAMKPAVLLLDEPASALDPISNAKIEELITELKEEYSIIIVTHNMQQALRVSDRTAFFLNGDLVE-YDQTEQIF 251 (268)
T ss_pred HHHHHHhCCCCEEEEcCCCcccCHHHHHHHHHHHHHHhcCCEEEEEEeCHHHHHHhCCEEEEEECCEEEE-eCCHHHHH
Confidence 9999999999999999999999999999999999876 3599999999999999999999999999985 46665553
No 357
>TIGR03873 F420-0_ABC_ATP proposed F420-0 ABC transporter, ATP-binding protein. This small clade of ABC-type transporter ATP-binding protein components is found as a three gene cassette along with a periplasmic substrate-binding protein (TIGR03868) and a permease (TIGR03869). The organisms containing this cassette are all Actinobacteria and all contain numerous genes requiring the coenzyme F420. This model was defined based on five such organisms, four of which are lacking all F420 biosynthetic capability save the final side-chain polyglutamate attachment step (via the gene cofE: TIGR01916). In Jonesia denitrificans DSM 20603 and marine actinobacterium PHSC20C1 this cassette is in an apparent operon with the cofE gene and, in PHSC20C1, also with a F420-dependent glucose-6-phosphate dehydrogenase (TIGR03554). Based on these observations we propose that this ATP-binding protein is a component of an F420-0 (that is, F420 lacking only the polyglutamate tail) transporter.
Probab=100.00 E-value=5.8e-39 Score=333.25 Aligned_cols=201 Identities=30% Similarity=0.457 Sum_probs=173.8
Q ss_pred EEEEeEEEEcCCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccce----------eeeec
Q 005532 425 VTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL----------PNYFE 494 (692)
Q Consensus 425 l~~~~l~~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~~----------~~~~~ 494 (692)
|+++|+++.|+++.+|+++||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.++. .+|++
T Consensus 2 l~~~~l~~~~~~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~~~ 81 (256)
T TIGR03873 2 LRLSRVSWSAGGRLIVDGVDVTAPPGSLTGLLGPNGSGKSTLLRLLAGALRPDAGTVDLAGVDLHGLSRRARARRVALVE 81 (256)
T ss_pred ceEEeEEEEECCEEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEEcccCCHHHHhhheEEec
Confidence 68999999999889999999999999999999999999999999999999999999999886541 34666
Q ss_pred ccchhhcCCCccHHHHHHHHhc--------cc--cHHHHHHHHhhcCCCcccccccCCCCCHHHHHHHHHHHHhccCCcE
Q 005532 495 QNQAEALDLDKTVLETVAEAAE--------DW--RIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTL 564 (692)
Q Consensus 495 q~~~~~l~~~~tv~e~~~~~~~--------~~--~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~LAral~~~p~l 564 (692)
|+. .+.+..|+.+|+..... .+ ....+.++++.+++. +..++++.+|||||||||+|||||+.+|+|
T Consensus 82 q~~--~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LS~G~~qrl~la~al~~~p~l 158 (256)
T TIGR03873 82 QDS--DTAVPLTVRDVVALGRIPHRSLWAGDSPHDAAVVDRALARTELS-HLADRDMSTLSGGERQRVHVARALAQEPKL 158 (256)
T ss_pred ccC--ccCCCCCHHHHHHhcchhhhhhccCCCHHHHHHHHHHHHHcCcH-hhhcCCcccCCHHHHHHHHHHHHHhcCCCE
Confidence 653 34567899999865310 01 123577889999994 677899999999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhccEEEEEECCEEEEecCChhHHH
Q 005532 565 LVLDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYYL 629 (692)
Q Consensus 565 LlLDEPTn~LD~~~~~~l~~~l~~~---~~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~~~~ 629 (692)
|||||||++||+.++..+.+.|+++ +.|||+||||++++..+||+|++|++|++.. .|..+++.
T Consensus 159 lllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~-~g~~~~~~ 225 (256)
T TIGR03873 159 LLLDEPTNHLDVRAQLETLALVRELAATGVTVVAALHDLNLAASYCDHVVVLDGGRVVA-AGPPREVL 225 (256)
T ss_pred EEEcCccccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCCEEE-ecCHHHhh
Confidence 9999999999999999999999876 4699999999999999999999999999974 57766653
No 358
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.7e-39 Score=330.10 Aligned_cols=202 Identities=19% Similarity=0.279 Sum_probs=169.9
Q ss_pred ceEEEEeEEEEcCCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccce-----------ee
Q 005532 423 SVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL-----------PN 491 (692)
Q Consensus 423 ~~l~~~~l~~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~~-----------~~ 491 (692)
++|+++|+++.|+++.+|+++||+|++||++||+|+||||||||+++|+|+++|++|+|.++|.++. .+
T Consensus 4 ~~l~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~i~ 83 (237)
T PRK11614 4 VMLSFDKVSAHYGKIQALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPRATSGRIVFDGKDITDWQTAKIMREAVA 83 (237)
T ss_pred cEEEEEeEEEeeCCceeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEecCCCCHHHHHHhCEE
Confidence 4799999999998888999999999999999999999999999999999999999999999986541 33
Q ss_pred eecccchhhcCCCccHHHHHHHHhc--cc--cHHHHHHHHhhc-CCCcccccccCCCCCHHHHHHHHHHHHhccCCcEEE
Q 005532 492 YFEQNQAEALDLDKTVLETVAEAAE--DW--RIDDIKGLLGRC-NFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLV 566 (692)
Q Consensus 492 ~~~q~~~~~l~~~~tv~e~~~~~~~--~~--~~~~~~~~L~~~-~l~~~~~~~~~~~LSgGqkqrv~LAral~~~p~lLl 566 (692)
|+.|+ ..+.+..|+.+|+..... .. ....+..+++.+ ++. +..++++.+|||||||||+|||||+.+|+|||
T Consensus 84 ~~~q~--~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~l~~~~~l~-~~~~~~~~~LS~G~~qrl~la~al~~~p~ill 160 (237)
T PRK11614 84 IVPEG--RRVFSRMTVEENLAMGGFFAERDQFQERIKWVYELFPRLH-ERRIQRAGTMSGGEQQMLAIGRALMSQPRLLL 160 (237)
T ss_pred EeccC--cccCCCCcHHHHHHHhhhccChhHHHHHHHHHHHHHHHHH-HHHhCchhhCCHHHHHHHHHHHHHHhCCCEEE
Confidence 55554 345567899999876321 11 122355666766 353 45678899999999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhccEEEEEECCEEEEecCChhHH
Q 005532 567 LDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYY 628 (692)
Q Consensus 567 LDEPTn~LD~~~~~~l~~~l~~~---~~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~~~ 628 (692)
|||||++||+.+++.+.+.|+++ +.|||++|||.+++.++||++++|++|++. +.|+.++.
T Consensus 161 lDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~-~~~~~~~~ 224 (237)
T PRK11614 161 LDEPSLGLAPIIIQQIFDTIEQLREQGMTIFLVEQNANQALKLADRGYVLENGHVV-LEDTGDAL 224 (237)
T ss_pred EcCccccCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHHHHHhhCCEEEEEeCCEEE-eeCCHHHH
Confidence 99999999999999999998764 469999999999999999999999999997 45766554
No 359
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.4e-39 Score=349.74 Aligned_cols=199 Identities=24% Similarity=0.314 Sum_probs=167.0
Q ss_pred EeEEEEcCCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccc--------------eeeee
Q 005532 428 KNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNV--------------LPNYF 493 (692)
Q Consensus 428 ~~l~~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~--------------~~~~~ 493 (692)
.++.+.|+...+|+++||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++ ..+|+
T Consensus 32 ~~~~~~~~~~~~L~~isl~i~~Gei~~LvG~NGsGKSTLLr~I~Gl~~p~sG~I~i~G~~i~~~~~~~l~~~~~~~igyv 111 (400)
T PRK10070 32 EQILEKTGLSLGVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEPTRGQVLIDGVDIAKISDAELREVRRKKIAMV 111 (400)
T ss_pred HHHHhhcCCeEEEEeEEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCEEEECCEECCcCCHHHHHHHHhCCEEEE
Confidence 3333334333489999999999999999999999999999999999999999999998654 13566
Q ss_pred cccchhhcCCCccHHHHHHHHhc--ccc----HHHHHHHHhhcCCCcccccccCCCCCHHHHHHHHHHHHhccCCcEEEE
Q 005532 494 EQNQAEALDLDKTVLETVAEAAE--DWR----IDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVL 567 (692)
Q Consensus 494 ~q~~~~~l~~~~tv~e~~~~~~~--~~~----~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~LAral~~~p~lLlL 567 (692)
+|+ ..+++..|+.+|+..... .+. ...+.++|+.+|+. ...++++.+|||||||||+|||||+.+|+||||
T Consensus 112 ~Q~--~~l~~~~Tv~enl~~~~~~~~~~~~~~~~~~~e~L~~~gL~-~~~~~~~~~LSgGq~QRv~LArAL~~~P~iLLL 188 (400)
T PRK10070 112 FQS--FALMPHMTVLDNTAFGMELAGINAEERREKALDALRQVGLE-NYAHSYPDELSGGMRQRVGLARALAINPDILLM 188 (400)
T ss_pred ECC--CcCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCC-hhhhcCcccCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 665 356678999999976432 121 23577899999995 568999999999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEECCEEEEecCChhHHHH
Q 005532 568 DEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYYLE 630 (692)
Q Consensus 568 DEPTn~LD~~~~~~l~~~l~~~----~~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~~~~~ 630 (692)
||||++||+.+++.+.+.|.++ +.|||+||||++++.++||+|++|++|++.. .|..+++..
T Consensus 189 DEPts~LD~~~r~~l~~~L~~l~~~~g~TIIivTHd~~~~~~~~Dri~vL~~G~i~~-~g~~~~l~~ 254 (400)
T PRK10070 189 DEAFSALDPLIRTEMQDELVKLQAKHQRTIVFISHDLDEAMRIGDRIAIMQNGEVVQ-VGTPDEILN 254 (400)
T ss_pred ECCCccCCHHHHHHHHHHHHHHHHHCCCeEEEEECCHHHHHHhCCEEEEEECCEEEe-cCCHHHHHh
Confidence 9999999999999999998754 4599999999999999999999999999974 466666544
No 360
>PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8e-39 Score=342.49 Aligned_cols=205 Identities=22% Similarity=0.313 Sum_probs=174.2
Q ss_pred eEEEEeEEEEcCC----eecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCC----CCeeEEEECCccce------
Q 005532 424 VVTIKNLEFGYED----RLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEK----PRGGEVLLGEHNVL------ 489 (692)
Q Consensus 424 ~l~~~~l~~~y~~----~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~----p~~G~i~~~~~~~~------ 489 (692)
+|+++||++.|+. ..+|+||||+|++||++||+|+||||||||+++|+|+++ |++|+|.++|.++.
T Consensus 3 ~L~v~~l~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTL~~~l~Gll~~~~~~~~G~i~~~G~~i~~~~~~~ 82 (326)
T PRK11022 3 LLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISEKE 82 (326)
T ss_pred eEEEeCeEEEECCCCccEEEEeeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCCCcceEEEECCEECCcCCHHH
Confidence 6899999999976 469999999999999999999999999999999999997 48999999987641
Q ss_pred --------eeeecccchhhcCCCccHHHHHHHHhc----c---ccHHHHHHHHhhcCCCc--ccccccCCCCCHHHHHHH
Q 005532 490 --------PNYFEQNQAEALDLDKTVLETVAEAAE----D---WRIDDIKGLLGRCNFKA--DMLDRKVSLLSGGEKARL 552 (692)
Q Consensus 490 --------~~~~~q~~~~~l~~~~tv~e~~~~~~~----~---~~~~~~~~~L~~~~l~~--~~~~~~~~~LSgGqkqrv 552 (692)
.+|++|+....+++.+++.+++..... . ...+.+.++|+.+|+.. ...++++.+|||||||||
T Consensus 83 ~~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~l~~~~~~~~~~~~~~~~~~L~~~gL~~~~~~l~~~p~~LSgGq~QRv 162 (326)
T PRK11022 83 RRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKKTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQRV 162 (326)
T ss_pred HHHHhCCCEEEEecCchhhcCCcCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHCCCCChHHHHhCCchhCCHHHHHHH
Confidence 467777654457788888877654321 1 11245788999999963 346889999999999999
Q ss_pred HHHHHhccCCcEEEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEECCEEEEecCChhHH
Q 005532 553 AFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYY 628 (692)
Q Consensus 553 ~LAral~~~p~lLlLDEPTn~LD~~~~~~l~~~l~~~----~~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~~~ 628 (692)
+|||||+.+|+||||||||++||+.++..+.++|+++ +.|+|+||||+.++..+||||++|++|++++. |+.++.
T Consensus 163 ~iArAL~~~P~llilDEPts~LD~~~~~~il~lL~~l~~~~g~til~iTHdl~~~~~~adri~vm~~G~ive~-g~~~~~ 241 (326)
T PRK11022 163 MIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVET-GKAHDI 241 (326)
T ss_pred HHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEE-CCHHHH
Confidence 9999999999999999999999999999999988764 45999999999999999999999999999864 655554
Q ss_pred H
Q 005532 629 L 629 (692)
Q Consensus 629 ~ 629 (692)
.
T Consensus 242 ~ 242 (326)
T PRK11022 242 F 242 (326)
T ss_pred h
Confidence 4
No 361
>PRK14258 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.8e-39 Score=332.41 Aligned_cols=208 Identities=21% Similarity=0.264 Sum_probs=169.1
Q ss_pred CcEEEEeEEEEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCC-----ccEEEECCCC----------
Q 005532 96 SGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPD-----SGNVIKAKSN---------- 160 (692)
Q Consensus 96 ~~l~i~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~-----~G~I~~~~~~---------- 160 (692)
+.|+++|++++|++..+|+|+||+|++|++++|+|+||||||||+++|+|+++|+ +|+|.++|.+
T Consensus 6 ~~l~~~nl~~~~~~~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~g~i~~~G~i~~~g~~i~~~~~~~~~ 85 (261)
T PRK14258 6 PAIKVNNLSFYYDTQKILEGVSMEIYQSKVTAIIGPSGCGKSTFLKCLNRMNELESEVRVEGRVEFFNQNIYERRVNLNR 85 (261)
T ss_pred ceEEEeeEEEEeCCeeEeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCccccceEEECCEEhhccccchHH
Confidence 3599999999998888999999999999999999999999999999999999985 8999887632
Q ss_pred --ceEEEEcccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHH
Q 005532 161 --MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAK 238 (692)
Q Consensus 161 --~~i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (692)
..++|++|++.+++ .|+.||+...... ... ........+
T Consensus 86 ~~~~i~~~~q~~~l~~-~tv~enl~~~~~~---------------~~~-----------------------~~~~~~~~~ 126 (261)
T PRK14258 86 LRRQVSMVHPKPNLFP-MSVYDNVAYGVKI---------------VGW-----------------------RPKLEIDDI 126 (261)
T ss_pred hhccEEEEecCCccCc-ccHHHHHHHHHHh---------------cCC-----------------------CcHHHHHHH
Confidence 24999999988765 8999998532100 000 000011234
Q ss_pred HHHHhhhcCCCc---cccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc----CCCeEEE
Q 005532 239 VSKLMPELGFTA---DDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVI 311 (692)
Q Consensus 239 i~~ll~~lgl~~---~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~----~~~tvI~ 311 (692)
+.++++.+|+.. ...++++.+|||||+||++|||||+.+|+||||||||++||+.+++++.++|++ .+.|||+
T Consensus 127 ~~~~l~~~~l~~~~~~~~~~~~~~LSgGq~qrv~laral~~~p~vllLDEP~~~LD~~~~~~l~~~l~~l~~~~~~tiii 206 (261)
T PRK14258 127 VESALKDADLWDEIKHKIHKSALDLSGGQQQRLCIARALAVKPKVLLMDEPCFGLDPIASMKVESLIQSLRLRSELTMVI 206 (261)
T ss_pred HHHHHHHcCCcchhhhHhcCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhCCCEEEE
Confidence 456666666631 245788899999999999999999999999999999999999999999887753 4899999
Q ss_pred EecCHHHHHhhcCeEEEEec-----ceEEEeccChHH
Q 005532 312 ISHDRAFLDQLCTKIVETEM-----GVSRTYEGNYSQ 343 (692)
Q Consensus 312 vsHd~~~l~~~~d~i~~l~~-----G~~~~~~G~y~~ 343 (692)
||||++++..+||+|+++++ |++ .+.|...+
T Consensus 207 vsH~~~~i~~~~d~i~~l~~~~~~~G~i-~~~~~~~~ 242 (261)
T PRK14258 207 VSHNLHQVSRLSDFTAFFKGNENRIGQL-VEFGLTKK 242 (261)
T ss_pred EECCHHHHHHhcCEEEEEccCCCcCceE-EEeCCHHH
Confidence 99999999999999999999 887 45566544
No 362
>PRK13639 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8e-39 Score=335.47 Aligned_cols=204 Identities=27% Similarity=0.407 Sum_probs=173.9
Q ss_pred eEEEEeEEEEcC-CeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccce------------e
Q 005532 424 VVTIKNLEFGYE-DRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL------------P 490 (692)
Q Consensus 424 ~l~~~~l~~~y~-~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~~------------~ 490 (692)
+|+++||++.|+ .+.+|+++||+|.+||++||+|+||||||||+++|+|+++|++|+|.++|.++. .
T Consensus 1 ~l~~~~l~~~~~~~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~i 80 (275)
T PRK13639 1 ILETRDLKYSYPDGTEALKGINFKAEKGEMVALLGPNGAGKSTLFLHFNGILKPTSGEVLIKGEPIKYDKKSLLEVRKTV 80 (275)
T ss_pred CEEEEEEEEEeCCCCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCEECccccchHHHHHhhe
Confidence 478999999997 457999999999999999999999999999999999999999999999986642 3
Q ss_pred eeecccchhhcCCCccHHHHHHHHhcc--c----cHHHHHHHHhhcCCCcccccccCCCCCHHHHHHHHHHHHhccCCcE
Q 005532 491 NYFEQNQAEALDLDKTVLETVAEAAED--W----RIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTL 564 (692)
Q Consensus 491 ~~~~q~~~~~l~~~~tv~e~~~~~~~~--~----~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~LAral~~~p~l 564 (692)
+|++|+....+ ...|+.+|+...... . ....+..+++.+++. +..++++.+|||||+||++|||||+.+|+|
T Consensus 81 ~~v~q~~~~~~-~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~~L~-~~~~~~~~~LS~Gq~qrv~laral~~~p~l 158 (275)
T PRK13639 81 GIVFQNPDDQL-FAPTVEEDVAFGPLNLGLSKEEVEKRVKEALKAVGME-GFENKPPHHLSGGQKKRVAIAGILAMKPEI 158 (275)
T ss_pred EEEeeChhhhh-ccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCc-hhhcCChhhCCHHHHHHHHHHHHHhcCCCE
Confidence 46666532223 356999998753211 1 123577899999995 567899999999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhccEEEEEECCEEEEecCChhHHHH
Q 005532 565 LVLDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYYLE 630 (692)
Q Consensus 565 LlLDEPTn~LD~~~~~~l~~~l~~~---~~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~~~~~ 630 (692)
|||||||++||+.++..+.+.|.++ +.|||+||||++++..+||++++|++|++.. .|+.+++..
T Consensus 159 lllDEPt~gLD~~~~~~l~~~l~~l~~~~~til~vtH~~~~~~~~~d~i~~l~~G~i~~-~g~~~~~~~ 226 (275)
T PRK13639 159 IVLDEPTSGLDPMGASQIMKLLYDLNKEGITIIISTHDVDLVPVYADKVYVMSDGKIIK-EGTPKEVFS 226 (275)
T ss_pred EEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEEE-eCCHHHHhc
Confidence 9999999999999999999999875 4599999999999999999999999999985 477776643
No 363
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-38 Score=331.55 Aligned_cols=205 Identities=21% Similarity=0.329 Sum_probs=171.7
Q ss_pred CCceEEEEeEEEEcCCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCC-----CeeEEEECCccce------
Q 005532 421 GRSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKP-----RGGEVLLGEHNVL------ 489 (692)
Q Consensus 421 ~~~~l~~~~l~~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p-----~~G~i~~~~~~~~------ 489 (692)
..++|+++|+++.|+++.+|+++||+|++||++||+|+||||||||+++|+|+++| ++|+|.++|.++.
T Consensus 9 ~~~~l~~~~l~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 88 (258)
T PRK14268 9 AQPQIKVENLNLWYGEKQALKNVSMQIPKNSVTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKVSIEGEDIYEPDVDV 88 (258)
T ss_pred cceeEEEeeeEEEeCCeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEEEECCEEcccccchH
Confidence 34579999999999988899999999999999999999999999999999999975 8999999886541
Q ss_pred ------eeeecccchhhcCCCccHHHHHHHHhcc--cc----HHHHHHHHhhcCCC---cccccccCCCCCHHHHHHHHH
Q 005532 490 ------PNYFEQNQAEALDLDKTVLETVAEAAED--WR----IDDIKGLLGRCNFK---ADMLDRKVSLLSGGEKARLAF 554 (692)
Q Consensus 490 ------~~~~~q~~~~~l~~~~tv~e~~~~~~~~--~~----~~~~~~~L~~~~l~---~~~~~~~~~~LSgGqkqrv~L 554 (692)
.+|++|.. .+.+ .|+.+|+...... .. ...+..+++.+++. ....++++.+|||||||||+|
T Consensus 89 ~~~~~~i~~v~q~~--~~~~-~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LSgG~~qrv~l 165 (258)
T PRK14268 89 VELRKNVGMVFQKP--NPFP-MSIYDNVAYGPRIHGANKKDLDGVVENALRSAALWDETSDRLKSPALSLSGGQQQRLCI 165 (258)
T ss_pred HHHhhhEEEEecCC--ccCc-ccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCcchhhhhcCChhhCCHHHHHHHHH
Confidence 24555543 3444 8999999754211 11 12467788888874 234678899999999999999
Q ss_pred HHHhccCCcEEEEeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhccEEEEEECCEEEEecCChhHHH
Q 005532 555 CKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY--KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYYL 629 (692)
Q Consensus 555 Aral~~~p~lLlLDEPTn~LD~~~~~~l~~~l~~~--~~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~~~~ 629 (692)
||||+.+|+||||||||++||+.++.++.+.|+++ +.|||+||||++++.++||+|++|++|++.. .|..+++.
T Consensus 166 aral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~-~~~~~~~~ 241 (258)
T PRK14268 166 ARTLAVKPKIILFDEPTSALDPISTARIEDLIMNLKKDYTIVIVTHNMQQAARISDYTGFFLMGELIE-FGQTRQIF 241 (258)
T ss_pred HHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhhCCEEEEEECCHHHHHHhCCEEEEEECCEEEE-eCCHHHHh
Confidence 99999999999999999999999999999999875 3599999999999999999999999999974 46655543
No 364
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.5e-39 Score=337.16 Aligned_cols=200 Identities=25% Similarity=0.316 Sum_probs=171.8
Q ss_pred EEEeEEEEcCCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccce--------------ee
Q 005532 426 TIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL--------------PN 491 (692)
Q Consensus 426 ~~~~l~~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~~--------------~~ 491 (692)
.++|+++.|+++.+|+++||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.++. .+
T Consensus 26 ~~~~~~~~~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~~~~i~ 105 (269)
T cd03294 26 SKEEILKKTGQTVGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIEPTSGKVLIDGQDIAAMSRKELRELRRKKIS 105 (269)
T ss_pred hhhhhhhhcCCceEeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccChhhhhhhhcCcEE
Confidence 5679999999999999999999999999999999999999999999999999999999886531 34
Q ss_pred eecccchhhcCCCccHHHHHHHHhcc--c----cHHHHHHHHhhcCCCcccccccCCCCCHHHHHHHHHHHHhccCCcEE
Q 005532 492 YFEQNQAEALDLDKTVLETVAEAAED--W----RIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLL 565 (692)
Q Consensus 492 ~~~q~~~~~l~~~~tv~e~~~~~~~~--~----~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~LAral~~~p~lL 565 (692)
|++|. ..+.+..|+.+|+...... + ....+.++++.+++. +..++++.+|||||||||+|||||+.+|+||
T Consensus 106 ~v~q~--~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LS~Gq~qrv~lAral~~~p~il 182 (269)
T cd03294 106 MVFQS--FALLPHRTVLENVAFGLEVQGVPRAEREERAAEALELVGLE-GWEHKYPDELSGGMQQRVGLARALAVDPDIL 182 (269)
T ss_pred EEecC--cccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCH-hHhhCCcccCCHHHHHHHHHHHHHhcCCCEE
Confidence 55554 3456678999998764211 1 123577889999995 5678999999999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEECCEEEEecCChhHHH
Q 005532 566 VLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYYL 629 (692)
Q Consensus 566 lLDEPTn~LD~~~~~~l~~~l~~~----~~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~~~~ 629 (692)
||||||++||+.+++.+.+.|.++ +.|||+||||++++.++||++++|++|++.. .|..+++.
T Consensus 183 lLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiii~tH~~~~~~~~~d~v~~l~~G~i~~-~g~~~~~~ 249 (269)
T cd03294 183 LMDEAFSALDPLIRREMQDELLRLQAELQKTIVFITHDLDEALRLGDRIAIMKDGRLVQ-VGTPEEIL 249 (269)
T ss_pred EEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEE-eCCHHHHH
Confidence 999999999999999999998765 4699999999999999999999999999985 46666554
No 365
>PRK15056 manganese/iron transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.1e-39 Score=337.18 Aligned_cols=209 Identities=22% Similarity=0.347 Sum_probs=167.4
Q ss_pred cEEEEeEEEEeC-CeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC-------ceEEEEcc
Q 005532 97 GVKLENISKSYK-GVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN-------MKIAFLSQ 168 (692)
Q Consensus 97 ~l~i~~ls~~y~-~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~-------~~i~~v~Q 168 (692)
.|+++|++++|+ ++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.. ..++|++|
T Consensus 6 ~l~~~~l~~~~~~~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~i~~v~q 85 (272)
T PRK15056 6 GIVVNDVTVTWRNGHTALRDASFTVPGGSIAALVGVNGSGKSTLFKALMGFVRLASGKISILGQPTRQALQKNLVAYVPQ 85 (272)
T ss_pred eEEEEeEEEEecCCcEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEhHHhhccceEEEecc
Confidence 499999999996 5789999999999999999999999999999999999999999999998743 25999999
Q ss_pred cCccC--CCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHHhhhc
Q 005532 169 EFEVS--MSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPEL 246 (692)
Q Consensus 169 ~~~~~--~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~l 246 (692)
++.+. ...++.+++....... .... .........++.++++.+
T Consensus 86 ~~~~~~~~~~~~~~~i~~~~~~~-------------~~~~----------------------~~~~~~~~~~~~~~l~~~ 130 (272)
T PRK15056 86 SEEVDWSFPVLVEDVVMMGRYGH-------------MGWL----------------------RRAKKRDRQIVTAALARV 130 (272)
T ss_pred ccccccCCCcchhhheecccccc-------------cccc----------------------cCCCHHHHHHHHHHHHHc
Confidence 97642 2346777763210000 0000 000011233456778888
Q ss_pred CCCccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHc---cCCCeEEEEecCHHHHHhhc
Q 005532 247 GFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG---KQDVPMVIISHDRAFLDQLC 323 (692)
Q Consensus 247 gl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~---~~~~tvI~vsHd~~~l~~~~ 323 (692)
|+. ...++++.+||||||||++|||||+.+|+||||||||++||+.+++++.++|+ +.+.|||+||||++++..+|
T Consensus 131 gl~-~~~~~~~~~LSgG~~qrv~laraL~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~g~tviivsH~~~~~~~~~ 209 (272)
T PRK15056 131 DMV-EFRHRQIGELSGGQKKRVFLARAIAQQGQVILLDEPFTGVDVKTEARIISLLRELRDEGKTMLVSTHNLGSVTEFC 209 (272)
T ss_pred CCh-hHhcCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhC
Confidence 886 46788999999999999999999999999999999999999999999998875 34889999999999999999
Q ss_pred CeEEEEecceEEEeccChHH
Q 005532 324 TKIVETEMGVSRTYEGNYSQ 343 (692)
Q Consensus 324 d~i~~l~~G~~~~~~G~y~~ 343 (692)
|+++++ +|++. +.|...+
T Consensus 210 d~v~~~-~G~i~-~~g~~~~ 227 (272)
T PRK15056 210 DYTVMV-KGTVL-ASGPTET 227 (272)
T ss_pred CEEEEE-CCEEE-eecCHHh
Confidence 999877 78873 5566543
No 366
>PRK14243 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.2e-39 Score=333.11 Aligned_cols=206 Identities=18% Similarity=0.274 Sum_probs=163.7
Q ss_pred CcEEEEeEEEEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCC-----CCccEEEECCCC----------
Q 005532 96 SGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEE-----PDSGNVIKAKSN---------- 160 (692)
Q Consensus 96 ~~l~i~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~-----p~~G~I~~~~~~---------- 160 (692)
++|+++|++++|++.++|+|+||+|++|++++|+|+||||||||+++|+|+++ |++|+|.++|..
T Consensus 9 ~~l~i~~v~~~~~~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~ 88 (264)
T PRK14243 9 TVLRTENLNVYYGSFLAVKNVWLDIPKNQITAFIGPSGCGKSTILRCFNRLNDLIPGFRVEGKVTFHGKNLYAPDVDPVE 88 (264)
T ss_pred eEEEEeeeEEEECCEEEeecceEEEcCCCEEEEECCCCCCHHHHHHHHHhhhcccCCCCCceEEEECCEEccccccChHH
Confidence 46999999999998889999999999999999999999999999999999976 489999998732
Q ss_pred --ceEEEEcccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHH
Q 005532 161 --MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAK 238 (692)
Q Consensus 161 --~~i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (692)
..|+|++|++.+++ .|+.+|+....... . . . ....++
T Consensus 89 ~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~-~-----------~---------------------------~-~~~~~~ 127 (264)
T PRK14243 89 VRRRIGMVFQKPNPFP-KSIYDNIAYGARIN-G-----------Y---------------------------K-GDMDEL 127 (264)
T ss_pred HhhhEEEEccCCcccc-ccHHHHHHhhhhhc-C-----------c---------------------------c-hHHHHH
Confidence 24999999987765 59999985321100 0 0 0 001112
Q ss_pred HHHHhhhcCCC---ccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc--CCCeEEEEe
Q 005532 239 VSKLMPELGFT---ADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVIIS 313 (692)
Q Consensus 239 i~~ll~~lgl~---~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~--~~~tvI~vs 313 (692)
+.++++.+|+. ....++++.+|||||+|||+|||||+.+|+||||||||++||+.+++++.++|++ .+.|||+||
T Consensus 128 ~~~~l~~~~l~~~l~~~~~~~~~~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tvi~vt 207 (264)
T PRK14243 128 VERSLRQAALWDEVKDKLKQSGLSLSGGQQQRLCIARAIAVQPEVILMDEPCSALDPISTLRIEELMHELKEQYTIIIVT 207 (264)
T ss_pred HHHHHHHhCchhhHHHHhcCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCEEEEEe
Confidence 22333333432 1234677899999999999999999999999999999999999999999888753 358999999
Q ss_pred cCHHHHHhhcCeEEEEe---------cceEEEeccChHH
Q 005532 314 HDRAFLDQLCTKIVETE---------MGVSRTYEGNYSQ 343 (692)
Q Consensus 314 Hd~~~l~~~~d~i~~l~---------~G~~~~~~G~y~~ 343 (692)
|+++++..+||+|++|+ +|++. ..|...+
T Consensus 208 H~~~~~~~~~d~v~~l~~~~~~~~~~~g~i~-~~~~~~~ 245 (264)
T PRK14243 208 HNMQQAARVSDMTAFFNVELTEGGGRYGYLV-EFDRTEK 245 (264)
T ss_pred cCHHHHHHhCCEEEEEecccccccccCceEE-EeCCHHH
Confidence 99999999999999998 68774 5565443
No 367
>PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional
Probab=100.00 E-value=1.4e-38 Score=340.89 Aligned_cols=210 Identities=21% Similarity=0.349 Sum_probs=177.4
Q ss_pred CCCceEEEEeEEEEcC----CeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCC---eeEEEECCccc----
Q 005532 420 SGRSVVTIKNLEFGYE----DRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPR---GGEVLLGEHNV---- 488 (692)
Q Consensus 420 ~~~~~l~~~~l~~~y~----~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~---~G~i~~~~~~~---- 488 (692)
..+++|+++|+++.|+ ...+|+|+||+|++||++||+|+||||||||+++|+|+++|+ +|+|.++|.++
T Consensus 8 ~~~~~L~i~~l~~~~~~~~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTL~~~l~Gl~~p~~~~sG~I~~~G~~i~~~~ 87 (330)
T PRK09473 8 QADALLDVKDLRVTFSTPDGDVTAVNDLNFSLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGREILNLP 87 (330)
T ss_pred CCCceEEEeCeEEEEecCCCCEEEEeeeEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCCCeEEEECCEECCcCC
Confidence 3456899999999995 257999999999999999999999999999999999999996 99999998764
Q ss_pred ----------eeeeecccchhhcCCCccHHHHHHHHhc---ccc----HHHHHHHHhhcCCCc--ccccccCCCCCHHHH
Q 005532 489 ----------LPNYFEQNQAEALDLDKTVLETVAEAAE---DWR----IDDIKGLLGRCNFKA--DMLDRKVSLLSGGEK 549 (692)
Q Consensus 489 ----------~~~~~~q~~~~~l~~~~tv~e~~~~~~~---~~~----~~~~~~~L~~~~l~~--~~~~~~~~~LSgGqk 549 (692)
..+|++|+....+++.+++.+++..... ... ...+.++|+.+++.. ...++++.+|||||+
T Consensus 88 ~~~~~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~L~~vgL~~~~~~~~~~p~~LSgG~~ 167 (330)
T PRK09473 88 EKELNKLRAEQISMIFQDPMTSLNPYMRVGEQLMEVLMLHKGMSKAEAFEESVRMLDAVKMPEARKRMKMYPHEFSGGMR 167 (330)
T ss_pred HHHHHHHhcCCEEEEEcCchhhcCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCChHHHhcCCcccCCHHHH
Confidence 2457777765567788999888764321 111 235778899999963 235778999999999
Q ss_pred HHHHHHHHhccCCcEEEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEECCEEEEecCCh
Q 005532 550 ARLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDY 625 (692)
Q Consensus 550 qrv~LAral~~~p~lLlLDEPTn~LD~~~~~~l~~~l~~~----~~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~ 625 (692)
|||+|||||+.+|+|||+||||++||+.++..+.++|+++ +.|+|+||||+.++..+||+|++|++|++++. |+.
T Consensus 168 QRv~IArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~~~~~~~Dri~vm~~G~ive~-g~~ 246 (330)
T PRK09473 168 QRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKREFNTAIIMITHDLGVVAGICDKVLVMYAGRTMEY-GNA 246 (330)
T ss_pred HHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEE-CCH
Confidence 9999999999999999999999999999999999988754 56999999999999999999999999999864 666
Q ss_pred hHHHH
Q 005532 626 NYYLE 630 (692)
Q Consensus 626 ~~~~~ 630 (692)
+++..
T Consensus 247 ~~i~~ 251 (330)
T PRK09473 247 RDVFY 251 (330)
T ss_pred HHHHh
Confidence 66544
No 368
>PRK14267 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-38 Score=330.76 Aligned_cols=204 Identities=25% Similarity=0.326 Sum_probs=172.1
Q ss_pred ceEEEEeEEEEcCCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCC-----CeeEEEECCccce--------
Q 005532 423 SVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKP-----RGGEVLLGEHNVL-------- 489 (692)
Q Consensus 423 ~~l~~~~l~~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p-----~~G~i~~~~~~~~-------- 489 (692)
.+|+++||++.|+++++|+++||+|.+||++||+|+||||||||+++|+|+++| ++|+|.++|.++.
T Consensus 3 ~~l~~~~l~~~~~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~ 82 (253)
T PRK14267 3 FAIETVNLRVYYGSNHVIKGVDLKIPQNGVFALMGPSGCGKSTLLRTFNRLLELNEEARVEGEVRLFGRNIYSPDVDPIE 82 (253)
T ss_pred ceEEEEeEEEEeCCeeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccChHH
Confidence 368999999999888899999999999999999999999999999999999987 4999999986542
Q ss_pred ----eeeecccchhhcCCCccHHHHHHHHhc--cc--c----HHHHHHHHhhcCCCc---ccccccCCCCCHHHHHHHHH
Q 005532 490 ----PNYFEQNQAEALDLDKTVLETVAEAAE--DW--R----IDDIKGLLGRCNFKA---DMLDRKVSLLSGGEKARLAF 554 (692)
Q Consensus 490 ----~~~~~q~~~~~l~~~~tv~e~~~~~~~--~~--~----~~~~~~~L~~~~l~~---~~~~~~~~~LSgGqkqrv~L 554 (692)
.+|++|+ ..+.+..|+.+|+..... .. . ...+..+++.+++.. ...++++.+|||||||||+|
T Consensus 83 ~~~~i~~~~q~--~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~G~~qrv~l 160 (253)
T PRK14267 83 VRREVGMVFQY--PNPFPHLTIYDNVAIGVKLNGLVKSKKELDERVEWALKKAALWDEVKDRLNDYPSNLSGGQRQRLVI 160 (253)
T ss_pred HhhceeEEecC--CccCCCCcHHHHHHHHHHhcCccCCHHHHHHHHHHHHHHcCCccchhhhhccChhhCCHHHHHHHHH
Confidence 2455554 345567899999875321 10 1 124677888888742 34678899999999999999
Q ss_pred HHHhccCCcEEEEeCCCCCCCHHHHHHHHHHHHhcC--ceEEEEecCHHHHHhhccEEEEEECCEEEEecCChhHHH
Q 005532 555 CKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEYK--GTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYYL 629 (692)
Q Consensus 555 Aral~~~p~lLlLDEPTn~LD~~~~~~l~~~l~~~~--~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~~~~ 629 (692)
||||+.+|+||||||||++||+.+++++.+.|+++. .|||+||||++++..+||+|++|++|++.. .|..+++.
T Consensus 161 aral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~-~~~~~~~~ 236 (253)
T PRK14267 161 ARALAMKPKILLMDEPTANIDPVGTAKIEELLFELKKEYTIVLVTHSPAQAARVSDYVAFLYLGKLIE-VGPTRKVF 236 (253)
T ss_pred HHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhhCCEEEEEECCHHHHHhhCCEEEEEECCEEEE-eCCHHHHH
Confidence 999999999999999999999999999999998763 699999999999999999999999999985 46665553
No 369
>PRK14265 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-38 Score=332.59 Aligned_cols=207 Identities=19% Similarity=0.266 Sum_probs=164.7
Q ss_pred CCcEEEEeEEEEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCC-----CccEEEECCCC---------
Q 005532 95 SSGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEP-----DSGNVIKAKSN--------- 160 (692)
Q Consensus 95 ~~~l~i~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p-----~~G~I~~~~~~--------- 160 (692)
.++|+++|++++|+++++|+++||+|++||+++|+|+||||||||+++|+|+++| ++|+|.++|.+
T Consensus 18 ~~~l~~~nl~~~~~~~~~l~~vs~~i~~Ge~~~IiG~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~l~~~~~~~~ 97 (274)
T PRK14265 18 HSVFEVEGVKVFYGGFLALVDVHLKIPAKKIIAFIGPSGCGKSTLLRCFNRMNDLIPGAKVEGRLLYRDRNIYDSQINSV 97 (274)
T ss_pred CceEEEeeEEEEeCCeEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhcccccccCCCcCceEEECCEecccccchhH
Confidence 4579999999999988899999999999999999999999999999999999863 68999988732
Q ss_pred ---ceEEEEcccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHH
Q 005532 161 ---MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDA 237 (692)
Q Consensus 161 ---~~i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (692)
..|+|++|++.++. .||.+|+....... ... ...+.
T Consensus 98 ~~~~~i~~v~q~~~l~~-~tv~~nl~~~~~~~------------~~~----------------------------~~~~~ 136 (274)
T PRK14265 98 KLRRQVGMVFQRPNPFP-KSIYENIAFAPRAN------------GYK----------------------------GNLDE 136 (274)
T ss_pred HHhhcEEEEccCCcccc-ccHHHHHHhHHHhc------------Cch----------------------------HHHHH
Confidence 25999999987765 59999985321000 000 00011
Q ss_pred HHHHHhhhcCCC---ccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc--CCCeEEEE
Q 005532 238 KVSKLMPELGFT---ADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVII 312 (692)
Q Consensus 238 ~i~~ll~~lgl~---~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~--~~~tvI~v 312 (692)
.+.++++.+|+. .+..++++.+|||||||||+|||||+.+|+||||||||++||+.+++++.++|.+ .+.|||+|
T Consensus 137 ~~~~~l~~~~l~~~l~~~~~~~~~~LSgGq~qrv~LAraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiii~ 216 (274)
T PRK14265 137 LVEDSLRRAAIWEEVKDKLKEKGTALSGGQQQRLCIARAIAMKPDVLLMDEPCSALDPISTRQVEELCLELKEQYTIIMV 216 (274)
T ss_pred HHHHHHHHcccchhhHHHhcCCcccCCHHHHHHHHHHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEE
Confidence 122333444431 1245678899999999999999999999999999999999999999999988754 36899999
Q ss_pred ecCHHHHHhhcCeEEEEe---------cceEEEeccChHH
Q 005532 313 SHDRAFLDQLCTKIVETE---------MGVSRTYEGNYSQ 343 (692)
Q Consensus 313 sHd~~~l~~~~d~i~~l~---------~G~~~~~~G~y~~ 343 (692)
|||++++..+||++++|+ +|++. ..|...+
T Consensus 217 sH~~~~~~~~~d~i~~l~~~~~~~~~~~G~~~-~~g~~~~ 255 (274)
T PRK14265 217 THNMQQASRVADWTAFFNTEIDEYGKRRGKLV-EFSPTEQ 255 (274)
T ss_pred eCCHHHHHHhCCEEEEEecccccccccCceEE-EeCCHHH
Confidence 999999999999999997 78874 5566544
No 370
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-38 Score=340.99 Aligned_cols=210 Identities=21% Similarity=0.315 Sum_probs=165.7
Q ss_pred CCcEEEEeEEEEeC--CeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCC-----CCccEEEECCCC-------
Q 005532 95 SSGVKLENISKSYK--GVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEE-----PDSGNVIKAKSN------- 160 (692)
Q Consensus 95 ~~~l~i~~ls~~y~--~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~-----p~~G~I~~~~~~------- 160 (692)
...|+++|++++|. ..++|+|+||+|++|+++||+|+||||||||+++|+|+++ |++|+|.++|.+
T Consensus 78 ~~~i~~~nls~~y~~~~~~~L~~is~~I~~Ge~v~IvG~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~idG~~i~~~~~~ 157 (329)
T PRK14257 78 ANVFEIRNFNFWYMNRTKHVLHDLNLDIKRNKVTAFIGPSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFLGTNTRSKKIS 157 (329)
T ss_pred CceEEEEeeEEEecCCCceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccc
Confidence 34699999999995 3569999999999999999999999999999999999986 579999987753
Q ss_pred -----ceEEEEcccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccH
Q 005532 161 -----MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTL 235 (692)
Q Consensus 161 -----~~i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (692)
..++|+||+|+++ +.|+++|+.... ... .. .+. ...
T Consensus 158 ~~~lr~~i~~v~q~~~~~-~~ti~eNi~~~~--~~~-------------~~-~~~----------------------~~~ 198 (329)
T PRK14257 158 SLELRTRIGMVFQKPTPF-EMSIFDNVAYGP--RNN-------------GI-NDR----------------------KIL 198 (329)
T ss_pred hHhhhccEEEEecCCccC-CCcHHHHHHhHH--Hhc-------------CC-ChH----------------------HHH
Confidence 2599999999875 689999986321 000 00 000 000
Q ss_pred HHHHHHHhhhcCCCc---cccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc--CCCeEE
Q 005532 236 DAKVSKLMPELGFTA---DDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMV 310 (692)
Q Consensus 236 ~~~i~~ll~~lgl~~---~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~--~~~tvI 310 (692)
++.+..+++.+++.+ ...++.+.+|||||||||+|||||+.+|+||||||||++||+.+..++.+.|++ .++|||
T Consensus 199 ~~~~~~~l~~~~L~~~l~~~~~~~~~~LSgGqkqRl~LARAl~~~p~IlLLDEPts~LD~~~~~~i~~~i~~l~~~~Tii 278 (329)
T PRK14257 199 EKIVEKSLKSAALWDEVKDDLDKAGNALSGGQQQRLCIARAIALEPEVLLMDEPTSALDPIATAKIEELILELKKKYSII 278 (329)
T ss_pred HHHHHHHHHHcCCcchhhhhhhCCcccCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEE
Confidence 112233344444321 234677899999999999999999999999999999999999999999887753 368999
Q ss_pred EEecCHHHHHhhcCeEEEEecceEEEeccChHHH
Q 005532 311 IISHDRAFLDQLCTKIVETEMGVSRTYEGNYSQY 344 (692)
Q Consensus 311 ~vsHd~~~l~~~~d~i~~l~~G~~~~~~G~y~~~ 344 (692)
+|||+++++.++||+|+++++|++. ..|...+.
T Consensus 279 ~iTH~l~~i~~~~Driivl~~G~i~-e~g~~~~l 311 (329)
T PRK14257 279 IVTHSMAQAQRISDETVFFYQGWIE-EAGETKTI 311 (329)
T ss_pred EEeCCHHHHHHhCCEEEEEECCEEE-EeCCHHHH
Confidence 9999999999999999999999985 45765443
No 371
>cd03230 ABC_DR_subfamily_A This family of ATP-binding proteins belongs to a multisubunit transporter involved in drug resistance (BcrA and DrrA), nodulation, lipid transport, and lantibiotic immunity. In bacteria and archaea, these transporters usually include an ATP-binding protein and one or two integral membrane proteins. Eukaryote systems of the ABCA subfamily display ABC domains that are quite similar to this family. The ATP-binding domain shows the highest similarity between all members of the ABC transporter family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6e-39 Score=313.46 Aligned_cols=160 Identities=36% Similarity=0.580 Sum_probs=145.7
Q ss_pred EEEEeEEEEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC---------ceEEEEcc
Q 005532 98 VKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN---------MKIAFLSQ 168 (692)
Q Consensus 98 l~i~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~---------~~i~~v~Q 168 (692)
++++|++++|++.++|+++||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|.. ..++|++|
T Consensus 1 l~~~~l~~~~~~~~~l~~~~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~i~~~~q 80 (173)
T cd03230 1 IEVRNLSKRYGKKTALDDISLTVEKGEIYGLLGPNGAGKTTLIKIILGLLKPDSGEIKVLGKDIKKEPEEVKRRIGYLPE 80 (173)
T ss_pred CEEEEEEEEECCeeeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcccchHhhhccEEEEec
Confidence 468999999988889999999999999999999999999999999999999999999998742 35999999
Q ss_pred cCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHHhhhcCC
Q 005532 169 EFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGF 248 (692)
Q Consensus 169 ~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl 248 (692)
++.+++..|+.+|+
T Consensus 81 ~~~~~~~~tv~~~~------------------------------------------------------------------ 94 (173)
T cd03230 81 EPSLYENLTVRENL------------------------------------------------------------------ 94 (173)
T ss_pred CCccccCCcHHHHh------------------------------------------------------------------
Confidence 98876667877663
Q ss_pred CccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc---CCCeEEEEecCHHHHHhhcCe
Q 005532 249 TADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK---QDVPMVIISHDRAFLDQLCTK 325 (692)
Q Consensus 249 ~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~---~~~tvI~vsHd~~~l~~~~d~ 325 (692)
. |||||+||++|||||+.+|++|||||||++||+.+++++.++|++ .|.|+|++|||.+++..+||+
T Consensus 95 --~--------LS~G~~qrv~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~th~~~~~~~~~d~ 164 (173)
T cd03230 95 --K--------LSGGMKQRLALAQALLHDPELLILDEPTSGLDPESRREFWELLRELKKEGKTILLSSHILEEAERLCDR 164 (173)
T ss_pred --h--------cCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHhCCE
Confidence 0 899999999999999999999999999999999999999887753 478999999999999999999
Q ss_pred EEEEecce
Q 005532 326 IVETEMGV 333 (692)
Q Consensus 326 i~~l~~G~ 333 (692)
++++++|+
T Consensus 165 i~~l~~g~ 172 (173)
T cd03230 165 VAILNNGR 172 (173)
T ss_pred EEEEeCCC
Confidence 99999885
No 372
>cd03254 ABCC_Glucan_exporter_like Glucan exporter ATP-binding protein. In A. tumefaciens cyclic beta-1, 2-glucan must be transported into the periplasmic space to exert its action as a virluence factor. This subfamily belongs to the MRP-like family and is involved in drug, peptide, and lipid export. The MRP-like family, similar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains each composed of six transmembrane (TM) helices and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.6e-39 Score=327.70 Aligned_cols=207 Identities=27% Similarity=0.405 Sum_probs=162.3
Q ss_pred EEEEeEEEEeCC-eeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC----------ceEEEE
Q 005532 98 VKLENISKSYKG-VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN----------MKIAFL 166 (692)
Q Consensus 98 l~i~~ls~~y~~-~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~----------~~i~~v 166 (692)
|+++|++++|++ +++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.. ..++|+
T Consensus 3 l~~~~l~~~~~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~~ 82 (229)
T cd03254 3 IEFENVNFSYDEKKPVLKDINFSIKPGETVAIVGPTGAGKTTLINLLMRFYDPQKGQILIDGIDIRDISRKSLRSMIGVV 82 (229)
T ss_pred EEEEEEEEecCCCCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCEeHHHcCHHHHhhhEEEe
Confidence 889999999975 579999999999999999999999999999999999999999999998732 259999
Q ss_pred cccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHHhhhc
Q 005532 167 SQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPEL 246 (692)
Q Consensus 167 ~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~l 246 (692)
+|++.++. .|+.+|+....... . ...+...++ . ..+...++.+
T Consensus 83 ~q~~~~~~-~tv~~~~~~~~~~~-~----~~~~~~~~~--------------~-----------------~~l~~~~~~~ 125 (229)
T cd03254 83 LQDTFLFS-GTIMENIRLGRPNA-T----DEEVIEAAK--------------E-----------------AGAHDFIMKL 125 (229)
T ss_pred cCCchhhh-hHHHHHHhccCCCC-C----HHHHHHHHH--------------H-----------------hChHHHHHhC
Confidence 99987755 49999985321100 0 000000000 0 0111223332
Q ss_pred --CCCccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc--CCCeEEEEecCHHHHHhh
Q 005532 247 --GFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVIISHDRAFLDQL 322 (692)
Q Consensus 247 --gl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~--~~~tvI~vsHd~~~l~~~ 322 (692)
|+. ...++++.+|||||||||+|||||+.+|++|||||||++||+.+++++.++|++ .+.|||+|||+++++..
T Consensus 126 ~~~~~-~~~~~~~~~LS~G~~~rv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~- 203 (229)
T cd03254 126 PNGYD-TVLGENGGNLSQGERQLLAIARAMLRDPKILILDEATSNIDTETEKLIQEALEKLMKGRTSIIIAHRLSTIKN- 203 (229)
T ss_pred ccccc-CHhhcCCCcCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHhh-
Confidence 343 235667899999999999999999999999999999999999999999887753 47899999999999965
Q ss_pred cCeEEEEecceEEEeccChHHH
Q 005532 323 CTKIVETEMGVSRTYEGNYSQY 344 (692)
Q Consensus 323 ~d~i~~l~~G~~~~~~G~y~~~ 344 (692)
||+|+++++|++. +.|.++++
T Consensus 204 ~d~i~~l~~g~~~-~~~~~~~~ 224 (229)
T cd03254 204 ADKILVLDDGKII-EEGTHDEL 224 (229)
T ss_pred CCEEEEEeCCeEE-EeCCHHHH
Confidence 9999999999984 56766544
No 373
>cd03252 ABCC_Hemolysin The ABC-transporter hemolysin B is a central component of the secretion machinery that translocates the toxin, hemolysin A, in a Sec-independent fashion across both membranes of E. coli. The hemolysin A (HlyA) transport machinery is composed of the ATP-binding cassette (ABC) transporter HlyB located in the inner membrane, hemolysin D (HlyD), also anchored in the inner membrane, and TolC, which resides in the outer membrane. HlyD apparently forms a continuous channel that bridges the entire periplasm, interacting with TolC and HlyB. This arrangement prevents the appearance of periplasmic intermediates of HlyA during substrate transport. Little is known about the molecular details of HlyA transport, but it is evident that ATP-hydrolysis by the ABC-transporter HlyB is a necessary source of energy.
Probab=100.00 E-value=3.9e-39 Score=330.64 Aligned_cols=207 Identities=25% Similarity=0.427 Sum_probs=162.5
Q ss_pred EEEEeEEEEeCC--eeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC----------ceEEE
Q 005532 98 VKLENISKSYKG--VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN----------MKIAF 165 (692)
Q Consensus 98 l~i~~ls~~y~~--~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~----------~~i~~ 165 (692)
|+++|++++|++ .++|+|+||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|.+ ..|+|
T Consensus 1 i~~~~l~~~~~~~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (237)
T cd03252 1 ITFEHVRFRYKPDGPVILDNISLRIKPGEVVGIVGRSGSGKSTLTKLIQRFYVPENGRVLVDGHDLALADPAWLRRQVGV 80 (237)
T ss_pred CEEEEEEEecCCCCccceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCeehHhcCHHHHhhcEEE
Confidence 468999999964 569999999999999999999999999999999999999999999998743 25999
Q ss_pred EcccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHHhhh
Q 005532 166 LSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPE 245 (692)
Q Consensus 166 v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~ 245 (692)
++|++.++ ..||.+|+...... ... ..+...+ .. ..+.++++.
T Consensus 81 ~~q~~~~~-~~tv~~nl~~~~~~-~~~----~~~~~~~------------------------~~-------~~~~~~l~~ 123 (237)
T cd03252 81 VLQENVLF-NRSIRDNIALADPG-MSM----ERVIEAA------------------------KL-------AGAHDFISE 123 (237)
T ss_pred EcCCchhc-cchHHHHhhccCCC-CCH----HHHHHHH------------------------HH-------cCcHHHHHh
Confidence 99998774 57999998532100 000 0000000 00 011233333
Q ss_pred c--CCCccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc--CCCeEEEEecCHHHHHh
Q 005532 246 L--GFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVIISHDRAFLDQ 321 (692)
Q Consensus 246 l--gl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~--~~~tvI~vsHd~~~l~~ 321 (692)
+ |+. ...++++.+|||||||||+|||||+.+|++|||||||++||+.+++.+.+.|++ .+.|||++|||++++.
T Consensus 124 l~~~~~-~~~~~~~~~LSgG~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~- 201 (237)
T cd03252 124 LPEGYD-TIVGEQGAGLSGGQRQRIAIARALIHNPRILIFDEATSALDYESEHAIMRNMHDICAGRTVIIIAHRLSTVK- 201 (237)
T ss_pred Cccccc-chhhcCCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHH-
Confidence 3 443 345678899999999999999999999999999999999999999999887753 4789999999999996
Q ss_pred hcCeEEEEecceEEEeccChHHH
Q 005532 322 LCTKIVETEMGVSRTYEGNYSQY 344 (692)
Q Consensus 322 ~~d~i~~l~~G~~~~~~G~y~~~ 344 (692)
.||+|+++++|++. +.|...++
T Consensus 202 ~~d~v~~l~~G~i~-~~~~~~~~ 223 (237)
T cd03252 202 NADRIIVMEKGRIV-EQGSHDEL 223 (237)
T ss_pred hCCEEEEEECCEEE-EEcCHHHH
Confidence 59999999999984 55665443
No 374
>cd03251 ABCC_MsbA MsbA is an essential ABC transporter, closely related to eukaryotic MDR proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6e-39 Score=328.55 Aligned_cols=207 Identities=27% Similarity=0.428 Sum_probs=163.7
Q ss_pred EEEEeEEEEeCCe--eceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC----------ceEEE
Q 005532 98 VKLENISKSYKGV--TVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN----------MKIAF 165 (692)
Q Consensus 98 l~i~~ls~~y~~~--~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~----------~~i~~ 165 (692)
|+++|++++|++. ++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.. ..|+|
T Consensus 1 i~~~~l~~~~~~~~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (234)
T cd03251 1 VEFKNVTFRYPGDGPPVLRDISLDIPAGETVALVGPSGSGKSTLVNLIPRFYDVDSGRILIDGHDVRDYTLASLRRQIGL 80 (234)
T ss_pred CEEEEEEEEeCCCCccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhccccCCCCEEEECCEEhhhCCHHHHHhhEEE
Confidence 4689999999875 79999999999999999999999999999999999999999999998742 24999
Q ss_pred EcccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHHhhh
Q 005532 166 LSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPE 245 (692)
Q Consensus 166 v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~ 245 (692)
++|++.++. .|++||+....... . .. .+...++ ...+.++++.
T Consensus 81 ~~q~~~~~~-~tv~enl~~~~~~~-~-~~---~~~~~~~-------------------------------~~~~~~~~~~ 123 (234)
T cd03251 81 VSQDVFLFN-DTVAENIAYGRPGA-T-RE---EVEEAAR-------------------------------AANAHEFIME 123 (234)
T ss_pred eCCCCeecc-ccHHHHhhccCCCC-C-HH---HHHHHHH-------------------------------HcCcHHHHHh
Confidence 999988754 69999985321100 0 00 0000000 0012233444
Q ss_pred c--CCCccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc--CCCeEEEEecCHHHHHh
Q 005532 246 L--GFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVIISHDRAFLDQ 321 (692)
Q Consensus 246 l--gl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~--~~~tvI~vsHd~~~l~~ 321 (692)
+ |+. ...++++.+|||||||||+|||||+.+|++|||||||++||+.+++.+.+.|++ .+.|||+|||+++++..
T Consensus 124 l~~~l~-~~~~~~~~~LS~G~~qrv~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~ 202 (234)
T cd03251 124 LPEGYD-TVIGERGVKLSGGQRQRIAIARALLKDPPILILDEATSALDTESERLVQAALERLMKNRTTFVIAHRLSTIEN 202 (234)
T ss_pred cccCcc-eeeccCCCcCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHhh
Confidence 4 444 345677899999999999999999999999999999999999999999888753 47899999999999976
Q ss_pred hcCeEEEEecceEEEeccChHHH
Q 005532 322 LCTKIVETEMGVSRTYEGNYSQY 344 (692)
Q Consensus 322 ~~d~i~~l~~G~~~~~~G~y~~~ 344 (692)
||+|+++++|++. ..|...++
T Consensus 203 -~d~v~~l~~G~i~-~~~~~~~~ 223 (234)
T cd03251 203 -ADRIVVLEDGKIV-ERGTHEEL 223 (234)
T ss_pred -CCEEEEecCCeEe-eeCCHHHH
Confidence 9999999999984 56665443
No 375
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-38 Score=334.99 Aligned_cols=202 Identities=28% Similarity=0.422 Sum_probs=171.9
Q ss_pred eEEEEeEEEEcCC---eecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccce----------e
Q 005532 424 VVTIKNLEFGYED---RLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL----------P 490 (692)
Q Consensus 424 ~l~~~~l~~~y~~---~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~~----------~ 490 (692)
+|+++||++.|++ +.+|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.++|.++. .
T Consensus 4 ~l~~~~l~~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~i 83 (279)
T PRK13650 4 IIEVKNLTFKYKEDQEKYTLNDVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLEAESGQIIIDGDLLTEENVWDIRHKI 83 (279)
T ss_pred eEEEEeEEEEcCCCCcCeeeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHHhhc
Confidence 6999999999973 45999999999999999999999999999999999999999999999987652 3
Q ss_pred eeecccchhhcCCCccHHHHHHHHhcc--cc----HHHHHHHHhhcCCCcccccccCCCCCHHHHHHHHHHHHhccCCcE
Q 005532 491 NYFEQNQAEALDLDKTVLETVAEAAED--WR----IDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTL 564 (692)
Q Consensus 491 ~~~~q~~~~~l~~~~tv~e~~~~~~~~--~~----~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~LAral~~~p~l 564 (692)
+|+.|+.. ...+..|+.+|+...... .. ...+.++++.+|+. +..++++.+|||||||||+|||||+.+|+|
T Consensus 84 ~~v~q~~~-~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~-~~~~~~~~~LSgGq~qrv~lAral~~~p~l 161 (279)
T PRK13650 84 GMVFQNPD-NQFVGATVEDDVAFGLENKGIPHEEMKERVNEALELVGMQ-DFKEREPARLSGGQKQRVAIAGAVAMRPKI 161 (279)
T ss_pred eEEEcChH-HhcccccHHHHHHhhHHhCCCCHHHHHHHHHHHHHHCCCH-hHhhCCcccCCHHHHHHHHHHHHHHcCCCE
Confidence 56666532 234567999999754221 11 23578899999995 678999999999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEECCEEEEecCChhHHH
Q 005532 565 LVLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYYL 629 (692)
Q Consensus 565 LlLDEPTn~LD~~~~~~l~~~l~~~----~~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~~~~ 629 (692)
|||||||++||+.++..+.+.|+++ +.|||+||||++++. +||+|++|++|++.. .|+.+++.
T Consensus 162 LlLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tilivtH~~~~~~-~~dri~~l~~G~i~~-~g~~~~~~ 228 (279)
T PRK13650 162 IILDEATSMLDPEGRLELIKTIKGIRDDYQMTVISITHDLDEVA-LSDRVLVMKNGQVES-TSTPRELF 228 (279)
T ss_pred EEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHH-hCCEEEEEECCEEEE-ECCHHHHH
Confidence 9999999999999999999988754 459999999999995 799999999999984 46665553
No 376
>COG4175 ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=2.4e-39 Score=327.56 Aligned_cols=209 Identities=25% Similarity=0.378 Sum_probs=178.7
Q ss_pred cEEEEeEEEEeCCe------------------------eceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCcc
Q 005532 97 GVKLENISKSYKGV------------------------TVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSG 152 (692)
Q Consensus 97 ~l~i~~ls~~y~~~------------------------~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G 152 (692)
.|+++|+++-||.+ .-++|+||+|+.||+..|.|-+|||||||+++|.++++|++|
T Consensus 4 ~i~i~nv~kiFG~~~~~a~~~~~~G~~k~ei~~~tg~vvGv~~~sl~v~~GeIfViMGLSGSGKSTLvR~~NrLiept~G 83 (386)
T COG4175 4 KIEIKNVYKIFGKNPKRALKLLDQGKSKAEILKKTGLVVGVNDASLDVEEGEIFVIMGLSGSGKSTLVRLLNRLIEPTRG 83 (386)
T ss_pred eEEeecceeecccCHHHHHHHHHcCCcHHHHHHhhCcEEeeccceeeecCCeEEEEEecCCCCHHHHHHHHhccCCCCCc
Confidence 48899999999641 147899999999999999999999999999999999999999
Q ss_pred EEEECCCC--------------ceEEEEcccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHH
Q 005532 153 NVIKAKSN--------------MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLD 218 (692)
Q Consensus 153 ~I~~~~~~--------------~~i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 218 (692)
+|.++|.+ .++++|+|++.++|+.||.+|+..++. +
T Consensus 84 ~ilv~g~di~~~~~~~Lr~~Rr~~~sMVFQ~FaLlPhrtVl~Nv~fGLe--v---------------------------- 133 (386)
T COG4175 84 EILVDGKDIAKLSAAELRELRRKKISMVFQSFALLPHRTVLENVAFGLE--V---------------------------- 133 (386)
T ss_pred eEEECCcchhcCCHHHHHHHHhhhhhhhhhhhccccchhHhhhhhccee--e----------------------------
Confidence 99999854 269999999999999999999864321 0
Q ss_pred HHHHHHHHHhhcCcccHHHHHHHHhhhcCCCccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHH
Q 005532 219 EFDLLQRKAQAVNLDTLDAKVSKLMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWL 298 (692)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L 298 (692)
..++..+-++++.+.|+.+|+. .+.++++.+|||||||||.|||||+.+|+|||+|||||+|||--+..+
T Consensus 134 ---------~Gv~~~er~~~a~~~l~~VgL~-~~~~~yp~eLSGGMqQRVGLARAla~~~~IlLMDEaFSALDPLIR~~m 203 (386)
T COG4175 134 ---------QGVPKAEREERALEALELVGLE-GYADKYPNELSGGMQQRVGLARALANDPDILLMDEAFSALDPLIRTEM 203 (386)
T ss_pred ---------cCCCHHHHHHHHHHHHHHcCch-hhhhcCcccccchHHHHHHHHHHHccCCCEEEecCchhhcChHHHHHH
Confidence 1123334456778889999997 678999999999999999999999999999999999999999888877
Q ss_pred HHHH----ccCCCeEEEEecCHHHHHhhcCeEEEEecceEEEeccChHHHHH
Q 005532 299 EGYL----GKQDVPMVIISHDRAFLDQLCTKIVETEMGVSRTYEGNYSQYVL 346 (692)
Q Consensus 299 ~~~L----~~~~~tvI~vsHd~~~l~~~~d~i~~l~~G~~~~~~G~y~~~~~ 346 (692)
++.| ++.++||||||||++++.++.|||..|++|++ .-.|...+.+.
T Consensus 204 QdeLl~Lq~~l~KTIvFitHDLdEAlriG~rIaimkdG~i-vQ~Gtp~eIl~ 254 (386)
T COG4175 204 QDELLELQAKLKKTIVFITHDLDEALRIGDRIAIMKDGEI-VQVGTPEEILL 254 (386)
T ss_pred HHHHHHHHHHhCCeEEEEecCHHHHHhccceEEEecCCeE-EEeCCHHHHHc
Confidence 7644 45789999999999999999999999999998 45677655443
No 377
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-38 Score=329.24 Aligned_cols=204 Identities=24% Similarity=0.356 Sum_probs=171.3
Q ss_pred CceEEEEeEEEEcCCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCC-----CeeEEEECCccce-------
Q 005532 422 RSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKP-----RGGEVLLGEHNVL------- 489 (692)
Q Consensus 422 ~~~l~~~~l~~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p-----~~G~i~~~~~~~~------- 489 (692)
.++|+++|+++.|+++.+|+++||+|++||+++|+|+||||||||+++|+|+++| ++|+|.++|.++.
T Consensus 5 ~~~l~~~~l~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 84 (254)
T PRK14273 5 EAIIETENLNLFYTDFKALNNINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEGKNIYSNNFDIL 84 (254)
T ss_pred CceEEEeeeEEEeCCceeecceeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECCEecccccccHH
Confidence 3479999999999888899999999999999999999999999999999999987 4899999886541
Q ss_pred -----eeeecccchhhcCCCccHHHHHHHHhcc---cc----HHHHHHHHhhcCCC---cccccccCCCCCHHHHHHHHH
Q 005532 490 -----PNYFEQNQAEALDLDKTVLETVAEAAED---WR----IDDIKGLLGRCNFK---ADMLDRKVSLLSGGEKARLAF 554 (692)
Q Consensus 490 -----~~~~~q~~~~~l~~~~tv~e~~~~~~~~---~~----~~~~~~~L~~~~l~---~~~~~~~~~~LSgGqkqrv~L 554 (692)
.+|++|+. .+. ..|+.+|+...... +. ...+..+++.+++. .+..++++.+|||||||||+|
T Consensus 85 ~~~~~i~~v~q~~--~~~-~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LSgG~~qrv~l 161 (254)
T PRK14273 85 ELRRKIGMVFQTP--NPF-LMSIYDNISYGPKIHGTKDKKKLDEIVEQSLKKSALWNEVKDKLNTNALSLSGGQQQRLCI 161 (254)
T ss_pred HHhhceEEEeecc--ccc-cCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhCCchhhHHHHhCCcccCCHHHHHHHHH
Confidence 34566543 333 48999999754321 11 23467788888873 234688899999999999999
Q ss_pred HHHhccCCcEEEEeCCCCCCCHHHHHHHHHHHHhcC--ceEEEEecCHHHHHhhccEEEEEECCEEEEecCChhHHH
Q 005532 555 CKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEYK--GTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYYL 629 (692)
Q Consensus 555 Aral~~~p~lLlLDEPTn~LD~~~~~~l~~~l~~~~--~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~~~~ 629 (692)
||+|+.+|+||||||||++||+.++..+.+.|+++. .|||+||||++++..+|||+++|++|++.. .|..+++.
T Consensus 162 aral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~-~g~~~~~~ 237 (254)
T PRK14273 162 ARTLAIEPNVILMDEPTSALDPISTGKIEELIINLKESYTIIIVTHNMQQAGRISDRTAFFLNGCIEE-ESSTDELF 237 (254)
T ss_pred HHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEE-eCCHHHHH
Confidence 999999999999999999999999999999998763 599999999999999999999999999985 46655553
No 378
>cd03300 ABC_PotA_N PotA is an ABC-type transporter and the ATPase component of the spermidine/putrescine-preferential uptake system consisting of PotA, -B, -C, and -D. PotA has two domains with the N-terminal domain containing the ATPase activity and the residues required for homodimerization with PotA and heterdimerization with PotB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.3e-38 Score=325.80 Aligned_cols=200 Identities=29% Similarity=0.442 Sum_probs=171.9
Q ss_pred EEEEeEEEEcCCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccce--------eeeeccc
Q 005532 425 VTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL--------PNYFEQN 496 (692)
Q Consensus 425 l~~~~l~~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~~--------~~~~~q~ 496 (692)
|+++|++++|+++.+|+++||+|.+|++++|+|+||||||||+++|+|+++|++|+|.++|.++. .+|++|+
T Consensus 1 l~~~~l~~~~~~~~il~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~i~~~~q~ 80 (232)
T cd03300 1 IELENVSKFYGGFVALDGVSLDIKEGEFFTLLGPSGCGKTTLLRLIAGFETPTSGEILLDGKDITNLPPHKRPVNTVFQN 80 (232)
T ss_pred CEEEeEEEEeCCeeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCChhhcceEEEecc
Confidence 46899999999889999999999999999999999999999999999999999999999886542 3566654
Q ss_pred chhhcCCCccHHHHHHHHhcc------ccHHHHHHHHhhcCCCcccccccCCCCCHHHHHHHHHHHHhccCCcEEEEeCC
Q 005532 497 QAEALDLDKTVLETVAEAAED------WRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEP 570 (692)
Q Consensus 497 ~~~~l~~~~tv~e~~~~~~~~------~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~LAral~~~p~lLlLDEP 570 (692)
..+....|+.+|+...... .....+..+++.+|+. ...++.+..|||||+|||+|||||+.+|++||||||
T Consensus 81 --~~~~~~~t~~~nl~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~lS~G~~qrl~laral~~~p~llllDEP 157 (232)
T cd03300 81 --YALFPHLTVFENIAFGLRLKKLPKAEIKERVAEALDLVQLE-GYANRKPSQLSGGQQQRVAIARALVNEPKVLLLDEP 157 (232)
T ss_pred --cccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCc-hhhcCChhhCCHHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 3455578999998754321 1123567889999995 668889999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEECCEEEEecCChhHH
Q 005532 571 TNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYY 628 (692)
Q Consensus 571 Tn~LD~~~~~~l~~~l~~~----~~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~~~ 628 (692)
|++||+.++.++.+.|+++ +.|||++|||++++..+||++++|++|++... |..+++
T Consensus 158 ~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sh~~~~~~~~~d~i~~l~~G~~~~~-~~~~~~ 218 (232)
T cd03300 158 LGALDLKLRKDMQLELKRLQKELGITFVFVTHDQEEALTMSDRIAVMNKGKIQQI-GTPEEI 218 (232)
T ss_pred cccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEec-CCHHHH
Confidence 9999999999999999765 46999999999999999999999999999854 554444
No 379
>PRK14252 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.4e-38 Score=330.21 Aligned_cols=208 Identities=23% Similarity=0.335 Sum_probs=166.1
Q ss_pred CCcEEEEeEEEEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCC-----CccEEEECCCC---------
Q 005532 95 SSGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEP-----DSGNVIKAKSN--------- 160 (692)
Q Consensus 95 ~~~l~i~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p-----~~G~I~~~~~~--------- 160 (692)
...|+++|++++|+++++|+|+||+|++||+++|+|+||||||||+++|+|+++| ++|+|.++|.+
T Consensus 14 ~~~l~~~~l~~~~~~~~vl~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~sG~i~~~g~~~~~~~~~~~ 93 (265)
T PRK14252 14 QQKSEVNKLNFYYGGYQALKNINMMVHEKQVTALIGPSGCGKSTFLRCFNRMHDLYPGNHYEGEIILHPDNVNILSPEVD 93 (265)
T ss_pred CceEEEEEEEEEECCeeeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCCCcccEEEEcCccccccccccC
Confidence 4569999999999988899999999999999999999999999999999999875 79999987532
Q ss_pred -----ceEEEEcccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCc-cc
Q 005532 161 -----MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNL-DT 234 (692)
Q Consensus 161 -----~~i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 234 (692)
..|+|++|++.++.. |+.+|+...+... . ... ..
T Consensus 94 ~~~~~~~i~~~~q~~~~~~~-tv~eni~~~~~~~---------------~------------------------~~~~~~ 133 (265)
T PRK14252 94 PIEVRMRISMVFQKPNPFPK-SIFENVAYGLRIR---------------G------------------------VKRRSI 133 (265)
T ss_pred HHHHhccEEEEccCCcCCcc-hHHHHHHhHHHHc---------------C------------------------CChHHH
Confidence 249999999887664 9999985321100 0 000 00
Q ss_pred HHHHHHHHhhhcCCC---ccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc--CCCeE
Q 005532 235 LDAKVSKLMPELGFT---ADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPM 309 (692)
Q Consensus 235 ~~~~i~~ll~~lgl~---~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~--~~~tv 309 (692)
.++++.++++.+++. ....++.+.+|||||+|||+|||||+.+|+||||||||++||+.+++++.++|++ .+.||
T Consensus 134 ~~~~~~~~l~~~~l~~~l~~~~~~~~~~LS~G~~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~ti 213 (265)
T PRK14252 134 LEERVENALRNAALWDEVKDRLGDLAFNLSGGQQQRLCIARALATDPEILLFDEPTSALDPIATASIEELISDLKNKVTI 213 (265)
T ss_pred HHHHHHHHHHHcCCchhhhHHHhCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCEE
Confidence 112233344444432 1244677899999999999999999999999999999999999999999887753 36899
Q ss_pred EEEecCHHHHHhhcCeEEEEecceEEEeccChHH
Q 005532 310 VIISHDRAFLDQLCTKIVETEMGVSRTYEGNYSQ 343 (692)
Q Consensus 310 I~vsHd~~~l~~~~d~i~~l~~G~~~~~~G~y~~ 343 (692)
|+|||+++++..+||+|+++++|++. ..|...+
T Consensus 214 iivth~~~~~~~~~d~i~~l~~G~i~-~~g~~~~ 246 (265)
T PRK14252 214 LIVTHNMQQAARVSDYTAYMYMGELI-EFGATDT 246 (265)
T ss_pred EEEecCHHHHHHhCCEEEEEECCEEE-EeCCHHH
Confidence 99999999999999999999999985 4455433
No 380
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-38 Score=329.89 Aligned_cols=204 Identities=27% Similarity=0.389 Sum_probs=171.6
Q ss_pred CceEEEEeEEEEcCCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCC-----CCeeEEEECCccce-------
Q 005532 422 RSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEK-----PRGGEVLLGEHNVL------- 489 (692)
Q Consensus 422 ~~~l~~~~l~~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~-----p~~G~i~~~~~~~~------- 489 (692)
..+|+++|+++.|+++.+|+++||+|++||++||+||||||||||+++|+|+++ |++|+|.++|.++.
T Consensus 11 ~~~l~~~~l~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~p~~G~i~~~g~~~~~~~~~~~ 90 (260)
T PRK10744 11 PSKIQVRNLNFYYGKFHALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNRMYELYPEQRAEGEILLDGENILTPKQDIA 90 (260)
T ss_pred CceEEEEEEEEEeCCeEEeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcceEEEECCEEccccccchH
Confidence 456999999999998889999999999999999999999999999999999986 58999999886541
Q ss_pred -----eeeecccchhhcCCCccHHHHHHHHhc---ccc----HHHHHHHHhhcCCCc---ccccccCCCCCHHHHHHHHH
Q 005532 490 -----PNYFEQNQAEALDLDKTVLETVAEAAE---DWR----IDDIKGLLGRCNFKA---DMLDRKVSLLSGGEKARLAF 554 (692)
Q Consensus 490 -----~~~~~q~~~~~l~~~~tv~e~~~~~~~---~~~----~~~~~~~L~~~~l~~---~~~~~~~~~LSgGqkqrv~L 554 (692)
.+|++|+. .+.+ .|+.+|+..... ... ...+.++++.+++.. ...++++.+|||||||||+|
T Consensus 91 ~~~~~i~~~~q~~--~~~~-~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~Gq~qrv~l 167 (260)
T PRK10744 91 LLRAKVGMVFQKP--TPFP-MSIYDNIAFGVRLFEKLSRAEMDERVEWALTKAALWNEVKDKLHQSGYSLSGGQQQRLCI 167 (260)
T ss_pred HHhcceEEEecCC--ccCc-CcHHHHHhhhHhhcCCCCHHHHHHHHHHHHHHcCCChhhHHHHhcCCCCCCHHHHHHHHH
Confidence 34556543 3444 799999875422 111 134677889888742 34678899999999999999
Q ss_pred HHHhccCCcEEEEeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhccEEEEEECCEEEEecCChhHHH
Q 005532 555 CKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY--KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYYL 629 (692)
Q Consensus 555 Aral~~~p~lLlLDEPTn~LD~~~~~~l~~~l~~~--~~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~~~~ 629 (692)
||||+.+|+||||||||++||+.+++.+.+.|+++ +.|||+||||++++..+||++++|++|++... |..+++.
T Consensus 168 aral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~-g~~~~~~ 243 (260)
T PRK10744 168 ARGIAIRPEVLLLDEPCSALDPISTGRIEELITELKQDYTVVIVTHNMQQAARCSDYTAFMYLGELIEF-GNTDTIF 243 (260)
T ss_pred HHHHHCCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEe-CCHHHHH
Confidence 99999999999999999999999999999999876 35999999999999999999999999999854 6655554
No 381
>PRK14266 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-38 Score=328.50 Aligned_cols=208 Identities=19% Similarity=0.325 Sum_probs=168.0
Q ss_pred cEEEEeEEEEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCC-----CCccEEEECCCC-----------
Q 005532 97 GVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEE-----PDSGNVIKAKSN----------- 160 (692)
Q Consensus 97 ~l~i~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~-----p~~G~I~~~~~~----------- 160 (692)
.|+++|+++.|+++++|+|+||+|++|++++|+|+||||||||+++|+|+.+ |++|+|.++|.+
T Consensus 3 ~l~~~~v~~~~~~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~~~~~ 82 (250)
T PRK14266 3 RIEVENLNTYFDDAHILKNVNLDIPKNSVTALIGPSGCGKSTFIRTLNRMNDLIPGFRHEGHIYLDGVDIYDPAVDVVEL 82 (250)
T ss_pred EEEEEeEEEEeCCeEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhhccCCCCCCccEEEECCEEcccccccHHHH
Confidence 5899999999998889999999999999999999999999999999999864 489999988743
Q ss_pred -ceEEEEcccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHH
Q 005532 161 -MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKV 239 (692)
Q Consensus 161 -~~i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 239 (692)
..++|++|++.++. .|+.+|+...+... . ..+....+.++
T Consensus 83 ~~~i~~~~q~~~~~~-~t~~~nl~~~~~~~---------------~-----------------------~~~~~~~~~~~ 123 (250)
T PRK14266 83 RKKVGMVFQKPNPFP-KSIFDNVAYGLRIH---------------G-----------------------EDDEDFIEERV 123 (250)
T ss_pred hhheEEEecCCccCc-chHHHHHHhHHhhc---------------C-----------------------CCCHHHHHHHH
Confidence 24999999988765 59999985322100 0 00000122334
Q ss_pred HHHhhhcCCCc---cccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc--CCCeEEEEec
Q 005532 240 SKLMPELGFTA---DDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVIISH 314 (692)
Q Consensus 240 ~~ll~~lgl~~---~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~--~~~tvI~vsH 314 (692)
.++++.+|+.. ...++++.+|||||||||+|||||+.+|+||||||||++||+.++.++.++|++ .+.|||+|||
T Consensus 124 ~~~l~~~~l~~~l~~~~~~~~~~LS~Gq~qrv~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~tiii~sh 203 (250)
T PRK14266 124 EESLKAAALWDEVKDKLDKSALGLSGGQQQRLCIARTIAVSPEVILMDEPCSALDPISTTKIEDLIHKLKEDYTIVIVTH 203 (250)
T ss_pred HHHHHHcCCchhHHHHHhCCcccCCHHHHHHHHHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCeEEEEEC
Confidence 45555555531 235778899999999999999999999999999999999999999999888753 4789999999
Q ss_pred CHHHHHhhcCeEEEEecceEEEeccChHHH
Q 005532 315 DRAFLDQLCTKIVETEMGVSRTYEGNYSQY 344 (692)
Q Consensus 315 d~~~l~~~~d~i~~l~~G~~~~~~G~y~~~ 344 (692)
+++++..+||+++++++|++. +.|..+++
T Consensus 204 ~~~~~~~~~~~i~~l~~G~i~-~~g~~~~~ 232 (250)
T PRK14266 204 NMQQATRVSKYTSFFLNGEII-ESGLTDQI 232 (250)
T ss_pred CHHHHHhhcCEEEEEECCeEE-EeCCHHHH
Confidence 999999999999999999984 56765543
No 382
>PRK10419 nikE nickel transporter ATP-binding protein NikE; Provisional
Probab=100.00 E-value=1.4e-38 Score=332.30 Aligned_cols=198 Identities=25% Similarity=0.470 Sum_probs=169.2
Q ss_pred ceEEEEeEEEEcC---------CeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccce----
Q 005532 423 SVVTIKNLEFGYE---------DRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL---- 489 (692)
Q Consensus 423 ~~l~~~~l~~~y~---------~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~~---- 489 (692)
++|+++||++.|+ ++.+|+|+||+|.+|++++|+|+||||||||+++|+|+++|++|+|.++|.++.
T Consensus 2 ~~l~~~nl~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~sG~i~~~g~~~~~~~~ 81 (268)
T PRK10419 2 TLLNVSGLSHHYAHGGLSGKHQHQTVLNNVSLSLKSGETVALLGRSGCGKSTLARLLVGLESPSQGNVSWRGEPLAKLNR 81 (268)
T ss_pred ceEEEeceEEEecCCccccccCceeeEeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEeccccCh
Confidence 3689999999997 478999999999999999999999999999999999999999999999986541
Q ss_pred ---------eeeecccchhhcCCCccHHHHHHHHhc---c----ccHHHHHHHHhhcCCCcccccccCCCCCHHHHHHHH
Q 005532 490 ---------PNYFEQNQAEALDLDKTVLETVAEAAE---D----WRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLA 553 (692)
Q Consensus 490 ---------~~~~~q~~~~~l~~~~tv~e~~~~~~~---~----~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~ 553 (692)
.+|++|+....+.+..++.+++..... . .....+.++++.+|+.....++++.+||||||||++
T Consensus 82 ~~~~~~~~~i~~v~q~~~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LS~Ge~qrl~ 161 (268)
T PRK10419 82 AQRKAFRRDIQMVFQDSISAVNPRKTVREIIREPLRHLLSLDKAERLARASEMLRAVDLDDSVLDKRPPQLSGGQLQRVC 161 (268)
T ss_pred hHHHHHHhcEEEEEcChhhccCCCCCHHHHHHHHHHhhccCCHHHHHHHHHHHHHHcCCChhHhhCCCccCChHHHHHHH
Confidence 346666543345567889888753211 1 112357889999999645678999999999999999
Q ss_pred HHHHhccCCcEEEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEECCEEEE
Q 005532 554 FCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQD 620 (692)
Q Consensus 554 LAral~~~p~lLlLDEPTn~LD~~~~~~l~~~l~~~----~~tviivSHd~~~l~~~~d~i~~l~~g~l~~ 620 (692)
|||||+.+|+||||||||++||+.+++.+.+.|+++ +.|||+||||++++..+||++++|++|++..
T Consensus 162 laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiiivsH~~~~i~~~~d~i~~l~~G~i~~ 232 (268)
T PRK10419 162 LARALAVEPKLLILDEAVSNLDLVLQAGVIRLLKKLQQQFGTACLFITHDLRLVERFCQRVMVMDNGQIVE 232 (268)
T ss_pred HHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHHcCcEEEEEECCHHHHHHhCCEEEEEECCEEee
Confidence 999999999999999999999999999999988754 4699999999999999999999999999874
No 383
>PRK09544 znuC high-affinity zinc transporter ATPase; Reviewed
Probab=100.00 E-value=1.3e-38 Score=329.14 Aligned_cols=200 Identities=28% Similarity=0.439 Sum_probs=168.9
Q ss_pred ceEEEEeEEEEcCCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccceeeeecccchhhcC
Q 005532 423 SVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQNQAEALD 502 (692)
Q Consensus 423 ~~l~~~~l~~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~~~~~~~q~~~~~l~ 502 (692)
++|+++||++.|+++.+|+++||+|++|++++|+|+||||||||+++|+|+++|++|+|.+++. ...+|++|+.. +.
T Consensus 3 ~~l~~~~l~~~~~~~~vl~~vs~~i~~Ge~~~I~G~NGsGKSTLl~~i~Gl~~p~~G~i~~~~~-~~i~~v~q~~~--~~ 79 (251)
T PRK09544 3 SLVSLENVSVSFGQRRVLSDVSLELKPGKILTLLGPNGAGKSTLVRVVLGLVAPDEGVIKRNGK-LRIGYVPQKLY--LD 79 (251)
T ss_pred cEEEEeceEEEECCceEEEeEEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCc-cCEEEeccccc--cc
Confidence 4799999999999888999999999999999999999999999999999999999999999863 34677777632 22
Q ss_pred C--CccHHHHHHHHhccccHHHHHHHHhhcCCCcccccccCCCCCHHHHHHHHHHHHhccCCcEEEEeCCCCCCCHHHHH
Q 005532 503 L--DKTVLETVAEAAEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKE 580 (692)
Q Consensus 503 ~--~~tv~e~~~~~~~~~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~LAral~~~p~lLlLDEPTn~LD~~~~~ 580 (692)
+ ..++.+++.... ......+..+++.+++. +..++++.+|||||||||+|||||+.+|++|||||||++||+.++.
T Consensus 80 ~~l~~~~~~~~~~~~-~~~~~~~~~~l~~~gl~-~~~~~~~~~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~ 157 (251)
T PRK09544 80 TTLPLTVNRFLRLRP-GTKKEDILPALKRVQAG-HLIDAPMQKLSGGETQRVLLARALLNRPQLLVLDEPTQGVDVNGQV 157 (251)
T ss_pred cccChhHHHHHhccc-cccHHHHHHHHHHcCCh-HHHhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHH
Confidence 2 246777654321 12334577889999995 5678899999999999999999999999999999999999999999
Q ss_pred HHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEECCEEEEecCChhHHH
Q 005532 581 MLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYYL 629 (692)
Q Consensus 581 ~l~~~l~~~----~~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~~~~ 629 (692)
.+.+.|.++ +.|||+||||++++..+||+|++|++ ++. ..|+.+++.
T Consensus 158 ~l~~~L~~~~~~~g~tiiivsH~~~~i~~~~d~i~~l~~-~i~-~~g~~~~~~ 208 (251)
T PRK09544 158 ALYDLIDQLRRELDCAVLMVSHDLHLVMAKTDEVLCLNH-HIC-CSGTPEVVS 208 (251)
T ss_pred HHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEECC-ceE-eeCCHHHHh
Confidence 999998754 56999999999999999999999965 665 456666554
No 384
>cd03297 ABC_ModC_molybdenum_transporter ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.2e-38 Score=322.02 Aligned_cols=189 Identities=31% Similarity=0.419 Sum_probs=163.0
Q ss_pred EEEEeEEEEcCCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccce--------------e
Q 005532 425 VTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL--------------P 490 (692)
Q Consensus 425 l~~~~l~~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~~--------------~ 490 (692)
+++ ||+++|+++.+ |+||+|++ |+++|+|+||||||||+++|+|+++|++|+|.++|.++. .
T Consensus 2 ~~~-~l~~~~~~~~~--~vsl~i~~-e~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~i 77 (214)
T cd03297 2 LCV-DIEKRLPDFTL--KIDFDLNE-EVTGIFGASGAGKSTLLRCIAGLEKPDGGTIVLNGTVLFDSRKKINLPPQQRKI 77 (214)
T ss_pred cee-eeeEecCCeee--CceEEEcc-eeEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEecccccchhhhhhHhhcE
Confidence 445 89999998766 99999999 999999999999999999999999999999999886531 3
Q ss_pred eeecccchhhcCCCccHHHHHHHHhcc----ccHHHHHHHHhhcCCCcccccccCCCCCHHHHHHHHHHHHhccCCcEEE
Q 005532 491 NYFEQNQAEALDLDKTVLETVAEAAED----WRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLV 566 (692)
Q Consensus 491 ~~~~q~~~~~l~~~~tv~e~~~~~~~~----~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~LAral~~~p~lLl 566 (692)
+|++|+ ..+++..|+.+|+...... .....+.++++.+++. ...++++.+|||||||||+|||||+.+|+|||
T Consensus 78 ~~~~q~--~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LS~G~~qrv~la~al~~~p~lll 154 (214)
T cd03297 78 GLVFQQ--YALFPHLNVRENLAFGLKRKRNREDRISVDELLDLLGLD-HLLNRYPAQLSGGEKQRVALARALAAQPELLL 154 (214)
T ss_pred EEEecC--CccCCCCCHHHHHHHHHhhCCHHHHHHHHHHHHHHcCCH-hHhhcCcccCCHHHHHHHHHHHHHhcCCCEEE
Confidence 455554 3456678999998754321 1223577899999995 56789999999999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEECCEEEE
Q 005532 567 LDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQD 620 (692)
Q Consensus 567 LDEPTn~LD~~~~~~l~~~l~~~----~~tviivSHd~~~l~~~~d~i~~l~~g~l~~ 620 (692)
|||||++||+.+++.+.+.|+++ +.|||+||||.+++..+||++++|++|++..
T Consensus 155 lDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~ 212 (214)
T cd03297 155 LDEPFSALDRALRLQLLPELKQIKKNLNIPVIFVTHDLSEAEYLADRIVVMEDGRLQY 212 (214)
T ss_pred EcCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEecCHHHHHHhcCEEEEEECCEEEe
Confidence 99999999999999999998764 4699999999999999999999999999864
No 385
>cd03220 ABC_KpsT_Wzt ABC_KpsT_Wzt The KpsT/Wzt ABC transporter subfamily is involved in extracellular polysaccharide export. Among the variety of membrane-linked or extracellular polysaccharides excreted by bacteria, only capsular polysaccharides, lipopolysaccharides, and teichoic acids have been shown to be exported by ABC transporters. A typical system is made of a conserved integral membrane and an ABC. In addition to these proteins, capsular polysaccharide exporter systems require two 'accessory' proteins to perform their function: a periplasmic (E.coli) or a lipid-anchored outer membrane protein called OMA (Neisseria meningitidis and Haemophilus influenzae) and a cytoplasmic membrane protein MPA2.
Probab=100.00 E-value=5.8e-39 Score=326.58 Aligned_cols=196 Identities=29% Similarity=0.387 Sum_probs=161.7
Q ss_pred EEEEeEEEEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCCceEEEEcccCccCCCCC
Q 005532 98 VKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSNMKIAFLSQEFEVSMSRT 177 (692)
Q Consensus 98 l~i~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~~~i~~v~Q~~~~~~~~T 177 (692)
+.+++++++|+++++|+|+||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|.. +.+..+...+.+..|
T Consensus 23 l~~~~~~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~--~~~~~~~~~~~~~~t 100 (224)
T cd03220 23 LGILGRKGEVGEFWALKDVSFEVPRGERIGLIGRNGAGKSTLLRLLAGIYPPDSGTVTVRGRV--SSLLGLGGGFNPELT 100 (224)
T ss_pred hhhhhhhhhcCCeEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEE--chhhcccccCCCCCc
Confidence 789999999999999999999999999999999999999999999999999999999998643 222223344556789
Q ss_pred HHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHHhhhcCCCcccccccc
Q 005532 178 VREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFTADDGDRLV 257 (692)
Q Consensus 178 v~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl~~~~~~~~~ 257 (692)
|.+|+...... . .........++.++++.+|+. +..++++
T Consensus 101 v~enl~~~~~~---------------~------------------------~~~~~~~~~~~~~~l~~~~l~-~~~~~~~ 140 (224)
T cd03220 101 GRENIYLNGRL---------------L------------------------GLSRKEIDEKIDEIIEFSELG-DFIDLPV 140 (224)
T ss_pred HHHHHHHHHHH---------------c------------------------CCCHHHHHHHHHHHHHHcCCh-hhhhCCh
Confidence 99997421100 0 000011223456677788886 5678889
Q ss_pred ccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc---CCCeEEEEecCHHHHHhhcCeEEEEecceE
Q 005532 258 ASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK---QDVPMVIISHDRAFLDQLCTKIVETEMGVS 334 (692)
Q Consensus 258 ~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~---~~~tvI~vsHd~~~l~~~~d~i~~l~~G~~ 334 (692)
.+||||||||++|||||+.+|++|||||||++||+.++..+.++|++ .+.|||+|||+++++..+||+++++++|++
T Consensus 141 ~~LSgG~~qrv~laral~~~p~llllDEP~~gLD~~~~~~~~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i 220 (224)
T cd03220 141 KTYSSGMKARLAFAIATALEPDILLIDEVLAVGDAAFQEKCQRRLRELLKQGKTVILVSHDPSSIKRLCDRALVLEKGKI 220 (224)
T ss_pred hhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEE
Confidence 99999999999999999999999999999999999999988877643 478999999999999999999999999987
Q ss_pred E
Q 005532 335 R 335 (692)
Q Consensus 335 ~ 335 (692)
.
T Consensus 221 ~ 221 (224)
T cd03220 221 R 221 (224)
T ss_pred E
Confidence 4
No 386
>PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional
Probab=100.00 E-value=1.5e-38 Score=361.30 Aligned_cols=205 Identities=22% Similarity=0.337 Sum_probs=179.5
Q ss_pred CceEEEEeEEEEcCCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccce-----------e
Q 005532 422 RSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL-----------P 490 (692)
Q Consensus 422 ~~~l~~~~l~~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~~-----------~ 490 (692)
.++|+++|+++.|+++.+|+++||+|++|+++||+|||||||||||++|+|+++|++|+|.++|.++. .
T Consensus 9 ~~~l~~~~l~~~~~~~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i 88 (510)
T PRK15439 9 PPLLCARSISKQYSGVEVLKGIDFTLHAGEVHALLGGNGAGKSTLMKIIAGIVPPDSGTLEIGGNPCARLTPAKAHQLGI 88 (510)
T ss_pred CceEEEEeEEEEeCCceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCCCCHHHHHhCCE
Confidence 34799999999999888999999999999999999999999999999999999999999999886541 3
Q ss_pred eeecccchhhcCCCccHHHHHHHHhccc--cHHHHHHHHhhcCCCcccccccCCCCCHHHHHHHHHHHHhccCCcEEEEe
Q 005532 491 NYFEQNQAEALDLDKTVLETVAEAAEDW--RIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLD 568 (692)
Q Consensus 491 ~~~~q~~~~~l~~~~tv~e~~~~~~~~~--~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~LAral~~~p~lLlLD 568 (692)
+|++|+. .+.+..|+.+|+....... ..+.+.++++.+++. ...++++.+|||||||||+|||||+.+|+|||||
T Consensus 89 ~~v~q~~--~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LSgG~~qrv~la~aL~~~p~lllLD 165 (510)
T PRK15439 89 YLVPQEP--LLFPNLSVKENILFGLPKRQASMQKMKQLLAALGCQ-LDLDSSAGSLEVADRQIVEILRGLMRDSRILILD 165 (510)
T ss_pred EEEeccC--ccCCCCcHHHHhhcccccchHHHHHHHHHHHHcCCC-ccccCChhhCCHHHHHHHHHHHHHHcCCCEEEEE
Confidence 4666653 4667889999987643221 124577899999995 5678999999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhccEEEEEECCEEEEecCChhHHHH
Q 005532 569 EPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYYLE 630 (692)
Q Consensus 569 EPTn~LD~~~~~~l~~~l~~~---~~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~~~~~ 630 (692)
|||++||+.+++++.+.|+++ +.|||+||||++++..+||+|++|++|++. +.|++++|..
T Consensus 166 EPt~~LD~~~~~~l~~~l~~~~~~g~tiiivtHd~~~~~~~~d~i~~l~~G~i~-~~g~~~~~~~ 229 (510)
T PRK15439 166 EPTASLTPAETERLFSRIRELLAQGVGIVFISHKLPEIRQLADRISVMRDGTIA-LSGKTADLST 229 (510)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEE-EecChHHcCH
Confidence 999999999999999998865 469999999999999999999999999997 4788888754
No 387
>PRK13538 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=8.8e-39 Score=320.62 Aligned_cols=187 Identities=27% Similarity=0.427 Sum_probs=162.9
Q ss_pred eEEEEeEEEEcCCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccce---------eeeec
Q 005532 424 VVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL---------PNYFE 494 (692)
Q Consensus 424 ~l~~~~l~~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~~---------~~~~~ 494 (692)
+|+++|+++.|+++.+|+++||+|++||++||+|+||||||||+++|+|+++|++|+|.++|.++. .+|+.
T Consensus 1 ~l~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~v~~~g~~~~~~~~~~~~~~~~~~ 80 (204)
T PRK13538 1 MLEARNLACERDERILFSGLSFTLNAGELVQIEGPNGAGKTSLLRILAGLARPDAGEVLWQGEPIRRQRDEYHQDLLYLG 80 (204)
T ss_pred CeEEEEEEEEECCEEEEecceEEECCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEcccchHHhhhheEEeC
Confidence 488999999999888999999999999999999999999999999999999999999999986542 23444
Q ss_pred ccchhhcCCCccHHHHHHHHhcc---ccHHHHHHHHhhcCCCcccccccCCCCCHHHHHHHHHHHHhccCCcEEEEeCCC
Q 005532 495 QNQAEALDLDKTVLETVAEAAED---WRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPT 571 (692)
Q Consensus 495 q~~~~~l~~~~tv~e~~~~~~~~---~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~LAral~~~p~lLlLDEPT 571 (692)
+. ..+.+..|+.+|+...... .....+.++++.+|+. ...++++.+||||||||++|||||+.+|++|||||||
T Consensus 81 ~~--~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~l~~~gl~-~~~~~~~~~LS~G~~qrl~la~al~~~p~llllDEPt 157 (204)
T PRK13538 81 HQ--PGIKTELTALENLRFYQRLHGPGDDEALWEALAQVGLA-GFEDVPVRQLSAGQQRRVALARLWLTRAPLWILDEPF 157 (204)
T ss_pred Cc--cccCcCCcHHHHHHHHHHhcCccHHHHHHHHHHHcCCH-HHhhCChhhcCHHHHHHHHHHHHHhcCCCEEEEeCCC
Confidence 43 3456678999998764322 2334678899999995 5678999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhccEEEEE
Q 005532 572 NHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEV 613 (692)
Q Consensus 572 n~LD~~~~~~l~~~l~~~---~~tviivSHd~~~l~~~~d~i~~l 613 (692)
++||+.+++.+.++|+++ +.|||+||||.+++..+.+|++.+
T Consensus 158 ~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~i~~~~~~~~~~ 202 (204)
T PRK13538 158 TAIDKQGVARLEALLAQHAEQGGMVILTTHQDLPVASDKVRKLRL 202 (204)
T ss_pred ccCCHHHHHHHHHHHHHHHHCCCEEEEEecChhhhccCCceEEec
Confidence 999999999999999876 469999999999999977888776
No 388
>PRK11144 modC molybdate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-38 Score=344.16 Aligned_cols=200 Identities=26% Similarity=0.407 Sum_probs=172.0
Q ss_pred eEEEEeEEEEcCCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccce--------------
Q 005532 424 VVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL-------------- 489 (692)
Q Consensus 424 ~l~~~~l~~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~~-------------- 489 (692)
||++ ||+++|+++.+ ++||+|++||+++|+|||||||||||++|+|+++|++|+|.++|.++.
T Consensus 1 ~l~~-~l~k~~~~~~~--~vsl~i~~Ge~~~l~G~nGsGKSTLl~~iaGl~~p~~G~I~~~g~~~~~~~~~~~~~~~~~~ 77 (352)
T PRK11144 1 MLEL-NFKQQLGDLCL--TVNLTLPAQGITAIFGRSGAGKTSLINAISGLTRPQKGRIVLNGRVLFDAEKGICLPPEKRR 77 (352)
T ss_pred CeEE-EEEEEeCCEEE--EEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccccchhhCC
Confidence 4778 99999987643 899999999999999999999999999999999999999999886531
Q ss_pred eeeecccchhhcCCCccHHHHHHHHhccccHHHHHHHHhhcCCCcccccccCCCCCHHHHHHHHHHHHhccCCcEEEEeC
Q 005532 490 PNYFEQNQAEALDLDKTVLETVAEAAEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDE 569 (692)
Q Consensus 490 ~~~~~q~~~~~l~~~~tv~e~~~~~~~~~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~LAral~~~p~lLlLDE 569 (692)
.+|++|+ ..+++..|+.+|+..........++.++++.+|+. +..++++.+|||||||||+|||||+.+|++|||||
T Consensus 78 i~~v~q~--~~l~~~~tv~enl~~~~~~~~~~~~~~~l~~~gl~-~~~~~~~~~LSgGq~qRvalaraL~~~p~llLLDE 154 (352)
T PRK11144 78 IGYVFQD--ARLFPHYKVRGNLRYGMAKSMVAQFDKIVALLGIE-PLLDRYPGSLSGGEKQRVAIGRALLTAPELLLMDE 154 (352)
T ss_pred EEEEcCC--cccCCCCcHHHHHHhhhhhhhHHHHHHHHHHcCCc-hhhhCCcccCCHHHHHHHHHHHHHHcCCCEEEEcC
Confidence 3456654 35677899999997654333345688899999995 56899999999999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEECCEEEEecCChhHHHH
Q 005532 570 PTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYYLE 630 (692)
Q Consensus 570 PTn~LD~~~~~~l~~~l~~~----~~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~~~~~ 630 (692)
||++||+.+++.+.+.|+++ +.|+|+||||++++..+||+|++|++|++..+ |+.++...
T Consensus 155 Pts~LD~~~~~~l~~~L~~l~~~~g~tii~vTHd~~~~~~~~d~i~~l~~G~i~~~-g~~~~i~~ 218 (352)
T PRK11144 155 PLASLDLPRKRELLPYLERLAREINIPILYVSHSLDEILRLADRVVVLEQGKVKAF-GPLEEVWA 218 (352)
T ss_pred CcccCCHHHHHHHHHHHHHHHHhcCCeEEEEecCHHHHHHhCCEEEEEeCCEEEEe-cCHHHHHh
Confidence 99999999999999988754 46999999999999999999999999999854 65555443
No 389
>PRK14241 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.3e-38 Score=329.05 Aligned_cols=203 Identities=26% Similarity=0.354 Sum_probs=171.0
Q ss_pred eEEEEeEEEEcCCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCC-----CeeEEEECCccce---------
Q 005532 424 VVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKP-----RGGEVLLGEHNVL--------- 489 (692)
Q Consensus 424 ~l~~~~l~~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p-----~~G~i~~~~~~~~--------- 489 (692)
+|+++|++++|+++.+|+++||+|++||++||+|+||||||||+++|+|+++| ++|+|.++|.++.
T Consensus 4 ~l~i~~v~~~~~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~laGl~~~~~~~~~~G~I~~~g~~~~~~~~~~~~~ 83 (258)
T PRK14241 4 RIDVKDLNIYYGSFHAVEDVNLNIEPRSVTAFIGPSGCGKSTVLRTLNRMHEVIPGARVEGEVLLDGEDLYGPGVDPVAV 83 (258)
T ss_pred cEEEeeEEEEECCEeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcccCCCcceEEEECCEeccccccChHHH
Confidence 58999999999988899999999999999999999999999999999999974 7999999886541
Q ss_pred ---eeeecccchhhcCCCccHHHHHHHHhc---ccc----HHHHHHHHhhcCCC---cccccccCCCCCHHHHHHHHHHH
Q 005532 490 ---PNYFEQNQAEALDLDKTVLETVAEAAE---DWR----IDDIKGLLGRCNFK---ADMLDRKVSLLSGGEKARLAFCK 556 (692)
Q Consensus 490 ---~~~~~q~~~~~l~~~~tv~e~~~~~~~---~~~----~~~~~~~L~~~~l~---~~~~~~~~~~LSgGqkqrv~LAr 556 (692)
.+|+.|+ ..+.+..|+.+|+..... ... ...+..+++.+++. ....++++.+|||||||||+|||
T Consensus 84 ~~~i~~~~q~--~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~G~~qrv~lar 161 (258)
T PRK14241 84 RRTIGMVFQR--PNPFPTMSIRDNVVAGLKLNGVRNKKDLDELVEKSLRGANLWNEVKDRLDKPGGGLSGGQQQRLCIAR 161 (258)
T ss_pred hcceEEEccc--cccCCCCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCchhhhhHhhCCcccCCHHHHHHHHHHH
Confidence 3455554 345567899999875421 111 12466788888873 23567889999999999999999
Q ss_pred HhccCCcEEEEeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhccEEEEEE------CCEEEEecCChhHH
Q 005532 557 FMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY--KGTVITVSHDRYFVKQIVNRVVEVK------GSNLQDYAGDYNYY 628 (692)
Q Consensus 557 al~~~p~lLlLDEPTn~LD~~~~~~l~~~l~~~--~~tviivSHd~~~l~~~~d~i~~l~------~g~l~~~~g~~~~~ 628 (692)
||+.+|++|||||||++||+.++.++.+.|.++ +.|||+||||++++.++||+|++|+ +|++.. .|+.+++
T Consensus 162 al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tviivsH~~~~~~~~~d~i~~l~~~~~~~~g~i~~-~~~~~~~ 240 (258)
T PRK14241 162 AIAVEPDVLLMDEPCSALDPISTLAIEDLINELKQDYTIVIVTHNMQQAARVSDQTAFFNLEATGKPGRLVE-IDDTEKI 240 (258)
T ss_pred HHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEecccCCCCceEEe-cCCHHHH
Confidence 999999999999999999999999999999876 3599999999999999999999997 788875 4766655
Q ss_pred H
Q 005532 629 L 629 (692)
Q Consensus 629 ~ 629 (692)
.
T Consensus 241 ~ 241 (258)
T PRK14241 241 F 241 (258)
T ss_pred H
Confidence 4
No 390
>PRK10247 putative ABC transporter ATP-binding protein YbbL; Provisional
Probab=100.00 E-value=8.4e-39 Score=325.65 Aligned_cols=198 Identities=27% Similarity=0.447 Sum_probs=166.6
Q ss_pred CceEEEEeEEEEcCCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccce----------ee
Q 005532 422 RSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL----------PN 491 (692)
Q Consensus 422 ~~~l~~~~l~~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~~----------~~ 491 (692)
+++|+++||++.|+++++|+++||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++. .+
T Consensus 5 ~~~i~~~~l~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 84 (225)
T PRK10247 5 SPLLQLQNVGYLAGDAKILNNISFSLRAGEFKLITGPSGCGKSTLLKIVASLISPTSGTLLFEGEDISTLKPEIYRQQVS 84 (225)
T ss_pred CceEEEeccEEeeCCceeeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEcCcCCHHHHHhccE
Confidence 34799999999999888999999999999999999999999999999999999999999999986542 34
Q ss_pred eecccchhhcCCCccHHHHHHHHhc----cccHHHHHHHHhhcCCCcccccccCCCCCHHHHHHHHHHHHhccCCcEEEE
Q 005532 492 YFEQNQAEALDLDKTVLETVAEAAE----DWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVL 567 (692)
Q Consensus 492 ~~~q~~~~~l~~~~tv~e~~~~~~~----~~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~LAral~~~p~lLlL 567 (692)
|++|.. .+. ..|+.+|+..... ......+.++++.+++.....++++.+|||||+|||+|||||+.+|+||||
T Consensus 85 ~~~q~~--~l~-~~tv~enl~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LS~G~~qrv~laral~~~p~llll 161 (225)
T PRK10247 85 YCAQTP--TLF-GDTVYDNLIFPWQIRNQQPDPAIFLDDLERFALPDTILTKNIAELSGGEKQRISLIRNLQFMPKVLLL 161 (225)
T ss_pred EEeccc--ccc-cccHHHHHHhHHhhcCCChHHHHHHHHHHHcCCChHHhcCCcccCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 666653 344 3599999865321 112335678999999964467899999999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEE--CCEEEEecCCh
Q 005532 568 DEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVK--GSNLQDYAGDY 625 (692)
Q Consensus 568 DEPTn~LD~~~~~~l~~~l~~~----~~tviivSHd~~~l~~~~d~i~~l~--~g~l~~~~g~~ 625 (692)
||||++||+.+++.+.+.|.++ +.|||+||||++++. .||++++|+ .|++. .|+|
T Consensus 162 DEPt~~LD~~~~~~l~~~l~~~~~~~~~tvii~sh~~~~~~-~~d~i~~l~~~~~~~~--~~~~ 222 (225)
T PRK10247 162 DEITSALDESNKHNVNEIIHRYVREQNIAVLWVTHDKDEIN-HADKVITLQPHAGEMQ--EARY 222 (225)
T ss_pred eCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECChHHHH-hCCEEEEEecccchHh--hhhh
Confidence 9999999999999999998865 459999999999996 599999996 44443 3555
No 391
>COG4598 HisP ABC-type histidine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.4e-39 Score=304.50 Aligned_cols=209 Identities=25% Similarity=0.436 Sum_probs=178.3
Q ss_pred CCcEEEEeEEEEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC--------------
Q 005532 95 SSGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN-------------- 160 (692)
Q Consensus 95 ~~~l~i~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~-------------- 160 (692)
++.|+++|+.++||...+|++|||+-.+|+++.|||.+||||||+|+||.=+..|+.|.|.++|..
T Consensus 4 ~~~l~v~dlHK~~G~~eVLKGvSL~A~~GdVisIIGsSGSGKSTfLRCiN~LE~P~~G~I~v~geei~~k~~~~G~l~~a 83 (256)
T COG4598 4 ENALEVEDLHKRYGEHEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPSAGSIRVNGEEIRLKRDKDGQLKPA 83 (256)
T ss_pred ccceehhHHHhhcccchhhcceeeecCCCCEEEEecCCCCchhHHHHHHHhhcCCCCceEEECCeEEEeeeCCCCCeeeC
Confidence 346999999999999999999999999999999999999999999999999999999999998632
Q ss_pred ---------ceEEEEcccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcC
Q 005532 161 ---------MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVN 231 (692)
Q Consensus 161 ---------~~i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (692)
.+.++|+|++++...+||.||+..+--.- + .+.
T Consensus 84 d~~q~~r~Rs~L~mVFQ~FNLWsHmtvLeNViEaPvhV-------------L-------------------------g~~ 125 (256)
T COG4598 84 DKRQLQRLRTRLGMVFQHFNLWSHMTVLENVIEAPVHV-------------L-------------------------GVS 125 (256)
T ss_pred CHHHHHHHHHHhhHhhhhcchhHHHHHHHHHHhcchHh-------------h-------------------------cCC
Confidence 24899999999988999999986431110 0 012
Q ss_pred cccHHHHHHHHhhhcCCCccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHH---HccCCCe
Q 005532 232 LDTLDAKVSKLMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGY---LGKQDVP 308 (692)
Q Consensus 232 ~~~~~~~i~~ll~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~---L~~~~~t 308 (692)
..+..+++..+|.++|+. +..+.++..|||||+||++|||||+.+|+++|+|||||+|||+-.-.+... |.+.|.|
T Consensus 126 k~ea~e~Ae~~L~kVGi~-ek~~~YP~~LSGGQQQR~aIARaLameP~vmLFDEPTSALDPElVgEVLkv~~~LAeEgrT 204 (256)
T COG4598 126 KAEAIERAEKYLAKVGIA-EKADAYPAHLSGGQQQRVAIARALAMEPEVMLFDEPTSALDPELVGEVLKVMQDLAEEGRT 204 (256)
T ss_pred HHHHHHHHHHHHHHhCch-hhhhcCccccCchHHHHHHHHHHHhcCCceEeecCCcccCCHHHHHHHHHHHHHHHHhCCe
Confidence 223345677889999997 567889999999999999999999999999999999999999987776554 5678999
Q ss_pred EEEEecCHHHHHhhcCeEEEEecceEEEeccChHH
Q 005532 309 MVIISHDRAFLDQLCTKIVETEMGVSRTYEGNYSQ 343 (692)
Q Consensus 309 vI~vsHd~~~l~~~~d~i~~l~~G~~~~~~G~y~~ 343 (692)
+++|||.+.|+.+++++|+.+.+|.+ .-.|...+
T Consensus 205 Mv~VTHEM~FAR~Vss~v~fLh~G~i-EE~G~P~q 238 (256)
T COG4598 205 MVVVTHEMGFARDVSSHVIFLHQGKI-EEEGPPEQ 238 (256)
T ss_pred EEEEeeehhHHHhhhhheEEeeccee-cccCChHH
Confidence 99999999999999999999999987 45666543
No 392
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-38 Score=332.86 Aligned_cols=203 Identities=25% Similarity=0.352 Sum_probs=170.6
Q ss_pred eEEEEeEEEEcC-CeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccce-----------ee
Q 005532 424 VVTIKNLEFGYE-DRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL-----------PN 491 (692)
Q Consensus 424 ~l~~~~l~~~y~-~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~~-----------~~ 491 (692)
+|+++|+++.|+ ++.+|+++||+|++||++||+|+||||||||+++|+|+++|++|+|.++|.++. .+
T Consensus 1 ml~~~~l~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i~ 80 (274)
T PRK13644 1 MIRLENVSYSYPDGTPALENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLRPQKGKVLVSGIDTGDFSKLQGIRKLVG 80 (274)
T ss_pred CEEEEEEEEEcCCCCceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEECCccccHHHHHhheE
Confidence 478999999995 467999999999999999999999999999999999999999999999986542 34
Q ss_pred eecccchhhcCCCccHHHHHHHHhccc------cHHHHHHHHhhcCCCcccccccCCCCCHHHHHHHHHHHHhccCCcEE
Q 005532 492 YFEQNQAEALDLDKTVLETVAEAAEDW------RIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLL 565 (692)
Q Consensus 492 ~~~q~~~~~l~~~~tv~e~~~~~~~~~------~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~LAral~~~p~lL 565 (692)
|++|+... .....|+.+|+......+ ....+..+++.+|+. ...++++..|||||||||+|||||+.+|+||
T Consensus 81 ~v~q~~~~-~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~gl~-~~~~~~~~~LS~G~~qrv~laral~~~p~ll 158 (274)
T PRK13644 81 IVFQNPET-QFVGRTVEEDLAFGPENLCLPPIEIRKRVDRALAEIGLE-KYRHRSPKTLSGGQGQCVALAGILTMEPECL 158 (274)
T ss_pred EEEEChhh-hcccchHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCH-HHhcCCcccCCHHHHHHHHHHHHHHcCCCEE
Confidence 55654321 234579999987543211 123477889999994 5678999999999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhccEEEEEECCEEEEecCChhHHHH
Q 005532 566 VLDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYYLE 630 (692)
Q Consensus 566 lLDEPTn~LD~~~~~~l~~~l~~~---~~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~~~~~ 630 (692)
||||||++||+.++..+.+.|+++ +.|||++|||++++. .||+|++|++|++.. .|+.+++..
T Consensus 159 lLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~~tH~~~~~~-~~d~v~~l~~G~i~~-~g~~~~~~~ 224 (274)
T PRK13644 159 IFDEVTSMLDPDSGIAVLERIKKLHEKGKTIVYITHNLEELH-DADRIIVMDRGKIVL-EGEPENVLS 224 (274)
T ss_pred EEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHh-hCCEEEEEECCEEEE-ECCHHHHhc
Confidence 999999999999999999998764 459999999999995 599999999999974 577666543
No 393
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=8.7e-39 Score=368.45 Aligned_cols=214 Identities=27% Similarity=0.433 Sum_probs=168.0
Q ss_pred CCCcEEEEeEEEEeCCe--eceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC----------c
Q 005532 94 ISSGVKLENISKSYKGV--TVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN----------M 161 (692)
Q Consensus 94 ~~~~l~i~~ls~~y~~~--~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~----------~ 161 (692)
..+.|+++||+|+|+.. ++|+|+||+|++||++||||+||||||||+|+|+|+++|++|+|.++|.+ .
T Consensus 468 ~~g~I~~~nvsf~y~~~~~~vL~~isL~I~~Ge~vaIvG~SGsGKSTL~KLL~gly~p~~G~I~~dg~dl~~i~~~~lR~ 547 (709)
T COG2274 468 LQGEIEFENVSFRYGPDDPPVLEDLSLEIPPGEKVAIVGRSGSGKSTLLKLLLGLYKPQQGRILLDGVDLNDIDLASLRR 547 (709)
T ss_pred cCceEEEEEEEEEeCCCCcchhhceeEEeCCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEeHHhcCHHHHHh
Confidence 45569999999999765 59999999999999999999999999999999999999999999999854 3
Q ss_pred eEEEEcccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHH
Q 005532 162 KIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSK 241 (692)
Q Consensus 162 ~i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 241 (692)
.||||+|++.+ ++.||+|||.....+. ..+++.+++..+. ..+.+..
T Consensus 548 ~ig~V~Q~~~L-f~gSI~eNi~l~~p~~-----~~e~i~~A~~~ag---------------------------~~~fI~~ 594 (709)
T COG2274 548 QVGYVLQDPFL-FSGSIRENIALGNPEA-----TDEEIIEAAQLAG---------------------------AHEFIEN 594 (709)
T ss_pred heeEEcccchh-hcCcHHHHHhcCCCCC-----CHHHHHHHHHHhC---------------------------cHHHHHh
Confidence 69999999876 7899999996432110 0011111111110 0111111
Q ss_pred HhhhcCCCccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc--CCCeEEEEecCHHHH
Q 005532 242 LMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVIISHDRAFL 319 (692)
Q Consensus 242 ll~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~--~~~tvI~vsHd~~~l 319 (692)
+ ..|+.+..+ .....||||||||++|||||+++|+|||||||||+||+++.+.+.+.|.+ .|+|+|+|||++..+
T Consensus 595 l--P~gy~t~v~-E~G~~LSGGQrQrlalARaLl~~P~ILlLDEaTSaLD~~sE~~I~~~L~~~~~~~T~I~IaHRl~ti 671 (709)
T COG2274 595 L--PMGYDTPVG-EGGANLSGGQRQRLALARALLSKPKILLLDEATSALDPETEAIILQNLLQILQGRTVIIIAHRLSTI 671 (709)
T ss_pred c--ccccccccc-cCCCCCCHHHHHHHHHHHHhccCCCEEEEeCcccccCHhHHHHHHHHHHHHhcCCeEEEEEccchHh
Confidence 1 124433332 33689999999999999999999999999999999999999999988876 469999999999999
Q ss_pred HhhcCeEEEEecceEEEeccChHHHH
Q 005532 320 DQLCTKIVETEMGVSRTYEGNYSQYV 345 (692)
Q Consensus 320 ~~~~d~i~~l~~G~~~~~~G~y~~~~ 345 (692)
. .||+|+++++|++ .-.|+.++.+
T Consensus 672 ~-~adrIiVl~~Gki-v~~gs~~ell 695 (709)
T COG2274 672 R-SADRIIVLDQGKI-VEQGSHEELL 695 (709)
T ss_pred h-hccEEEEccCCce-eccCCHHHHH
Confidence 7 4999999999998 4667765543
No 394
>cd03229 ABC_Class3 This class is comprised of all BPD (Binding Protein Dependent) systems that are largely represented in archaea and eubacteria and are primarily involved in scavenging solutes from the environment. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=8.3e-39 Score=313.92 Aligned_cols=162 Identities=39% Similarity=0.572 Sum_probs=145.9
Q ss_pred EEEEeEEEEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC------------ceEEE
Q 005532 98 VKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN------------MKIAF 165 (692)
Q Consensus 98 l~i~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~------------~~i~~ 165 (692)
|+++|++++|+++++|+++||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.+ ..++|
T Consensus 1 i~~~~l~~~~~~~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~ 80 (178)
T cd03229 1 LELKNVSKRYGQKTVLNDVSLNIEAGEIVALLGPSGSGKSTLLRCIAGLEEPDSGSILIDGEDLTDLEDELPPLRRRIGM 80 (178)
T ss_pred CEEEEEEEEECCeEEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccchhHHHHhhcEEE
Confidence 468999999998889999999999999999999999999999999999999999999987632 25999
Q ss_pred EcccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHHhhh
Q 005532 166 LSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPE 245 (692)
Q Consensus 166 v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~ 245 (692)
++|++.+++..|+.+|+.
T Consensus 81 ~~q~~~~~~~~t~~~~l~-------------------------------------------------------------- 98 (178)
T cd03229 81 VFQDFALFPHLTVLENIA-------------------------------------------------------------- 98 (178)
T ss_pred EecCCccCCCCCHHHhee--------------------------------------------------------------
Confidence 999988777778877641
Q ss_pred cCCCccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc---C-CCeEEEEecCHHHHHh
Q 005532 246 LGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK---Q-DVPMVIISHDRAFLDQ 321 (692)
Q Consensus 246 lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~---~-~~tvI~vsHd~~~l~~ 321 (692)
. .||||||||++|||||+.+|++|||||||++||+.++.++.++|++ . +.|+|+||||++++..
T Consensus 99 ------~------~lS~G~~qr~~la~al~~~p~llilDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~ 166 (178)
T cd03229 99 ------L------GLSGGQQQRVALARALAMDPDVLLLDEPTSALDPITRREVRALLKSLQAQLGITVVLVTHDLDEAAR 166 (178)
T ss_pred ------e------cCCHHHHHHHHHHHHHHCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHH
Confidence 0 0999999999999999999999999999999999999999887753 3 7899999999999999
Q ss_pred hcCeEEEEecce
Q 005532 322 LCTKIVETEMGV 333 (692)
Q Consensus 322 ~~d~i~~l~~G~ 333 (692)
+||+|+++++|+
T Consensus 167 ~~d~i~~l~~g~ 178 (178)
T cd03229 167 LADRVVVLRDGK 178 (178)
T ss_pred hcCEEEEEeCCC
Confidence 999999998873
No 395
>cd03248 ABCC_TAP TAP, the Transporter Associated with Antigen Processing; TAP is essential for peptide delivery from the cytosol into the lumen of the endoplasmic reticulum (ER), where these peptides are loaded on major histocompatibility complex (MHC) I molecules. Loaded MHC I leave the ER and display their antigenic cargo on the cell surface to cytotoxic T cells. Subsequently, virus-infected or malignantly transformed cells can be eliminated. TAP belongs to the large family of ATP-binding cassette (ABC) transporters, which translocate a vast variety of solutes across membranes.
Probab=100.00 E-value=3.6e-39 Score=328.53 Aligned_cols=200 Identities=24% Similarity=0.435 Sum_probs=161.0
Q ss_pred CCcEEEEeEEEEeCC---eeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC----------c
Q 005532 95 SSGVKLENISKSYKG---VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN----------M 161 (692)
Q Consensus 95 ~~~l~i~~ls~~y~~---~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~----------~ 161 (692)
.++|+++|++++|++ .++|+++||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.. .
T Consensus 9 ~~~l~~~~l~~~~~~~~~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~ 88 (226)
T cd03248 9 KGIVKFQNVTFAYPTRPDTLVLQDVSFTLHPGEVTALVGPSGSGKSTVVALLENFYQPQGGQVLLDGKPISQYEHKYLHS 88 (226)
T ss_pred CceEEEEEEEEEeCCCCCCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCcEEEECCCchHHcCHHHHHh
Confidence 456999999999975 369999999999999999999999999999999999999999999998753 2
Q ss_pred eEEEEcccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHH
Q 005532 162 KIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSK 241 (692)
Q Consensus 162 ~i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 241 (692)
.|+|++|++.++ ..||.+|+...+... .. ..+.. . .....+.+
T Consensus 89 ~i~~~~q~~~l~-~~tv~~nl~~~~~~~-~~----~~~~~------------------------~-------~~~~~~~~ 131 (226)
T cd03248 89 KVSLVGQEPVLF-ARSLQDNIAYGLQSC-SF----ECVKE------------------------A-------AQKAHAHS 131 (226)
T ss_pred hEEEEecccHHH-hhhHHHHhccccCCC-CH----HHHHH------------------------H-------HHHcCcHH
Confidence 599999998765 469999985322100 00 00000 0 00011234
Q ss_pred Hhhhc--CCCccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc--CCCeEEEEecCHH
Q 005532 242 LMPEL--GFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVIISHDRA 317 (692)
Q Consensus 242 ll~~l--gl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~--~~~tvI~vsHd~~ 317 (692)
+++.+ |+. ...++++.+|||||+|||+|||||+.+|++|||||||++||+.+++++.++|++ .+.|||+||||++
T Consensus 132 ~l~~l~~gl~-~~~~~~~~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~ 210 (226)
T cd03248 132 FISELASGYD-TEVGEKGSQLSGGQKQRVAIARALIRNPQVLILDEATSALDAESEQQVQQALYDWPERRTVLVIAHRLS 210 (226)
T ss_pred HHHhcccccc-chhhcCCCcCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEEEEEECCHH
Confidence 55556 665 346778999999999999999999999999999999999999999999888753 3689999999999
Q ss_pred HHHhhcCeEEEEecce
Q 005532 318 FLDQLCTKIVETEMGV 333 (692)
Q Consensus 318 ~l~~~~d~i~~l~~G~ 333 (692)
++.. ||+|+++++|+
T Consensus 211 ~~~~-~d~i~~l~~g~ 225 (226)
T cd03248 211 TVER-ADQILVLDGGR 225 (226)
T ss_pred HHHh-CCEEEEecCCc
Confidence 9965 99999999885
No 396
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.7e-38 Score=330.08 Aligned_cols=205 Identities=23% Similarity=0.349 Sum_probs=171.8
Q ss_pred CCceEEEEeEEEEcCCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCC-----CeeEEEECCccce------
Q 005532 421 GRSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKP-----RGGEVLLGEHNVL------ 489 (692)
Q Consensus 421 ~~~~l~~~~l~~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p-----~~G~i~~~~~~~~------ 489 (692)
..++|+++||++.|+++.+|+|+||+|++|++++|+|+||||||||+++|+|+++| ++|+|.++|.++.
T Consensus 16 ~~~~l~~~nl~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~I~~~g~~i~~~~~~~ 95 (267)
T PRK14235 16 TEIKMRARDVSVFYGEKQALFDVDLDIPEKTVTAFIGPSGCGKSTFLRCLNRMNDTIDGCRVTGKITLDGEDIYDPRLDV 95 (267)
T ss_pred CCceEEEEeEEEEECCEEEEEEEEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEECcccccch
Confidence 34579999999999988899999999999999999999999999999999999974 8999999986542
Q ss_pred ------eeeecccchhhcCCCccHHHHHHHHhc--c-----cc-HHHHHHHHhhcCCCc---ccccccCCCCCHHHHHHH
Q 005532 490 ------PNYFEQNQAEALDLDKTVLETVAEAAE--D-----WR-IDDIKGLLGRCNFKA---DMLDRKVSLLSGGEKARL 552 (692)
Q Consensus 490 ------~~~~~q~~~~~l~~~~tv~e~~~~~~~--~-----~~-~~~~~~~L~~~~l~~---~~~~~~~~~LSgGqkqrv 552 (692)
.+|+.|.. .+.+ .|+.+|+..... . .. ...+..+++.+++.. ...++++.+|||||||||
T Consensus 96 ~~~~~~i~~v~q~~--~~~~-~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LSgGq~qrv 172 (267)
T PRK14235 96 VELRARVGMVFQKP--NPFP-KSIYENVAYGPRIHGLARSKAELDEIVETSLRKAGLWEEVKDRLHEPGTGLSGGQQQRL 172 (267)
T ss_pred HHHhhceEEEecCC--CCCC-CcHHHHHHHHHHhcccccchHHHHHHHHHHHHHcCCchhhhHHhhCCcccCCHHHHHHH
Confidence 24555542 3433 599999975421 1 11 234678899999853 245788999999999999
Q ss_pred HHHHHhccCCcEEEEeCCCCCCCHHHHHHHHHHHHhcC--ceEEEEecCHHHHHhhccEEEEEECCEEEEecCChhHHH
Q 005532 553 AFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEYK--GTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYYL 629 (692)
Q Consensus 553 ~LAral~~~p~lLlLDEPTn~LD~~~~~~l~~~l~~~~--~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~~~~ 629 (692)
+|||||+.+|+||||||||++||+.++..+.+.|+++. .|||+||||++++..+||++++|++|++.. .|..+++.
T Consensus 173 ~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~l~~~~tiiivtH~~~~~~~~~d~v~~l~~G~i~~-~g~~~~~~ 250 (267)
T PRK14235 173 CIARAIAVSPEVILMDEPCSALDPIATAKVEELIDELRQNYTIVIVTHSMQQAARVSQRTAFFHLGNLVE-VGDTEKMF 250 (267)
T ss_pred HHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHhcCCeEEEEEcCHHHHHhhCCEEEEEECCEEEE-eCCHHHHH
Confidence 99999999999999999999999999999999998763 599999999999999999999999999985 46665553
No 397
>PRK10418 nikD nickel transporter ATP-binding protein NikD; Provisional
Probab=100.00 E-value=2.4e-38 Score=328.15 Aligned_cols=205 Identities=20% Similarity=0.305 Sum_probs=171.8
Q ss_pred eEEEEeEEEEcCCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCC----CeeEEEECCccc--------eee
Q 005532 424 VVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKP----RGGEVLLGEHNV--------LPN 491 (692)
Q Consensus 424 ~l~~~~l~~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p----~~G~i~~~~~~~--------~~~ 491 (692)
+|+++|++++| ++++|+++||+|++||+++|+|+||||||||+++|+|+++| ++|+|.++|.++ ..+
T Consensus 4 ~l~~~~l~~~~-~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~G~i~~~g~~i~~~~~~~~~i~ 82 (254)
T PRK10418 4 QIELRNIALQA-AQPLVHGVSLTLQRGRVLALVGGSGSGKSLTCAAALGILPAGVRQTAGRVLLDGKPVAPCALRGRKIA 82 (254)
T ss_pred EEEEeCeEEEe-ccceecceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCcCCEEEECCeeccccccccceEE
Confidence 58999999999 57899999999999999999999999999999999999999 999999988764 245
Q ss_pred eecccchhhcCCCccHHHHHHHHh---c-cccHHHHHHHHhhcCCCcc--cccccCCCCCHHHHHHHHHHHHhccCCcEE
Q 005532 492 YFEQNQAEALDLDKTVLETVAEAA---E-DWRIDDIKGLLGRCNFKAD--MLDRKVSLLSGGEKARLAFCKFMVKPSTLL 565 (692)
Q Consensus 492 ~~~q~~~~~l~~~~tv~e~~~~~~---~-~~~~~~~~~~L~~~~l~~~--~~~~~~~~LSgGqkqrv~LAral~~~p~lL 565 (692)
|++|+....+.+..|+.+++.... . ......+.++++.+++... ..++++.+|||||||||+|||||+.+|+||
T Consensus 83 ~v~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~LS~Gq~qrv~laral~~~p~lL 162 (254)
T PRK10418 83 TIMQNPRSAFNPLHTMHTHARETCLALGKPADDATLTAALEAVGLENAARVLKLYPFEMSGGMLQRMMIALALLCEAPFI 162 (254)
T ss_pred EEecCCccccCccccHHHHHHHHHHHcCCChHHHHHHHHHHHcCCCChhhhhhcCCcccCHHHHHHHHHHHHHhcCCCEE
Confidence 666654222445568877765421 1 1223467889999999532 468899999999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEECCEEEEecCChhHHHH
Q 005532 566 VLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYYLE 630 (692)
Q Consensus 566 lLDEPTn~LD~~~~~~l~~~l~~~----~~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~~~~~ 630 (692)
||||||++||+.+++.+.+.|+++ +.|||+||||.+++..+||++++|++|++.. .|+.+++..
T Consensus 163 lLDEPt~~LD~~~~~~l~~~L~~~~~~~g~til~~sH~~~~~~~~~d~v~~l~~G~i~~-~~~~~~~~~ 230 (254)
T PRK10418 163 IADEPTTDLDVVAQARILDLLESIVQKRALGMLLVTHDMGVVARLADDVAVMSHGRIVE-QGDVETLFN 230 (254)
T ss_pred EEeCCCcccCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhCCEEEEEECCEEEE-ecCHHHHhh
Confidence 999999999999999999988764 4599999999999999999999999999974 576666543
No 398
>TIGR01184 ntrCD nitrate transport ATP-binding subunits C and D. This model describes the ATP binding subunits of nitrate transport in bacteria and archaea. This protein belongs to the ATP-binding cassette (ABC) superfamily. It is thought that the two subunits encoded by ntrC and ntrD form the binding surface for interaction with ATP. This model is restricted in identifying ATP binding subunit associated with the nitrate transport. Nitrate assimilation is aided by other proteins derived from the operon which among others include products of ntrA - a regulatory protein; ntrB - a hydropbobic transmembrane permease and narB - a reductase.
Probab=100.00 E-value=7e-39 Score=327.30 Aligned_cols=185 Identities=29% Similarity=0.408 Sum_probs=155.6
Q ss_pred eeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCCc-----eEEEEcccCccCCCCCHHHHHHhhhH
Q 005532 113 LKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSNM-----KIAFLSQEFEVSMSRTVREEFMSAFK 187 (692)
Q Consensus 113 L~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~~-----~i~~v~Q~~~~~~~~Tv~e~i~~~~~ 187 (692)
|+|+||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|.+. ..+|++|++.+++..|+.+|+...+.
T Consensus 1 l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~v~q~~~l~~~~tv~e~l~~~~~ 80 (230)
T TIGR01184 1 LKGVNLTIQQGEFISLIGHSGCGKSTLLNLISGLAQPTSGGVILEGKQITEPGPDRMVVFQNYSLLPWLTVRENIALAVD 80 (230)
T ss_pred CCceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChhheEEecCcccCCCCCHHHHHHHHHH
Confidence 5799999999999999999999999999999999999999999987432 36899999988788899999853210
Q ss_pred HHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHHhhhcCCCccccccccccCChHHHHH
Q 005532 188 EEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFTADDGDRLVASFSSGWQMR 267 (692)
Q Consensus 188 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl~~~~~~~~~~~LSGGqkqR 267 (692)
.. .. ..+......++.++++.+|+. ...++++.+||||||||
T Consensus 81 ~~-------------~~------------------------~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LSgG~~qr 122 (230)
T TIGR01184 81 RV-------------LP------------------------DLSKSERRAIVEEHIALVGLT-EAADKRPGQLSGGMKQR 122 (230)
T ss_pred hc-------------cc------------------------CCCHHHHHHHHHHHHHHcCCH-HHHcCChhhCCHHHHHH
Confidence 00 00 000111234566788888986 56788899999999999
Q ss_pred HHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc----CCCeEEEEecCHHHHHhhcCeEEEEecceEE
Q 005532 268 MSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVIISHDRAFLDQLCTKIVETEMGVSR 335 (692)
Q Consensus 268 vaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~----~~~tvI~vsHd~~~l~~~~d~i~~l~~G~~~ 335 (692)
|+|||||+.+|+||||||||+|||+.+++++.+.|++ .++|||+||||++++..+||+|+++++|++.
T Consensus 123 v~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~G~i~ 194 (230)
T TIGR01184 123 VAIARALSIRPKVLLLDEPFGALDALTRGNLQEELMQIWEEHRVTVLMVTHDVDEALLLSDRVVMLTNGPAA 194 (230)
T ss_pred HHHHHHHHcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEeCCcEe
Confidence 9999999999999999999999999999999887753 4889999999999999999999999999874
No 399
>cd03223 ABCD_peroxisomal_ALDP Peroxisomal ATP-binding cassette transporter (Pat) is involved in the import of very long-chain fatty acids (VLCFA) into the peroxisome. The peroxisomal membrane forms a permeability barrier for a wide variety of metabolites required for and formed during fatty acid beta-oxidation. To communicate with the cytoplasm and mitochondria, peroxisomes need dedicated proteins to transport such hydrophilic molecules across their membranes. X-linked adrenoleukodystrophy (X-ALD) is caused by mutations in the ALD gene, which encodes ALDP (adrenoleukodystrophy protein ), a peroxisomal integral membrane protein that is a member of the ATP-binding cassette (ABC) transporter protein family. The disease is characterized by a striking and unpredictable variation in phenotypic expression. Phenotypes include the rapidly progressive childhood cerebral form (CCALD), the milder adult form, adrenomyeloneuropathy (AMN), and variants without neurologic involvement (i.e. asympt
Probab=100.00 E-value=1.2e-38 Score=309.07 Aligned_cols=162 Identities=25% Similarity=0.439 Sum_probs=146.1
Q ss_pred EEEEeEEEEeCC-eeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCCceEEEEcccCccCCCC
Q 005532 98 VKLENISKSYKG-VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSNMKIAFLSQEFEVSMSR 176 (692)
Q Consensus 98 l~i~~ls~~y~~-~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~~~i~~v~Q~~~~~~~~ 176 (692)
|+++|++++|++ +++|+++||+|++|++++|+|+||||||||+++|+|+++|++|+|.+++. ..++|++|++.+ +..
T Consensus 1 i~~~~~~~~~~~~~~~l~~i~l~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~~~-~~i~~~~q~~~~-~~~ 78 (166)
T cd03223 1 IELENLSLATPDGRVLLKDLSFEIKPGDRLLITGPSGTGKSSLFRALAGLWPWGSGRIGMPEG-EDLLFLPQRPYL-PLG 78 (166)
T ss_pred CEEEEEEEEcCCCCeeeecCeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCC-ceEEEECCCCcc-ccc
Confidence 468999999964 57999999999999999999999999999999999999999999999853 589999999875 467
Q ss_pred CHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHHhhhcCCCccccccc
Q 005532 177 TVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFTADDGDRL 256 (692)
Q Consensus 177 Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl~~~~~~~~ 256 (692)
|+.||+.. + .
T Consensus 79 tv~~nl~~--------------------------------------------------------------~--------~ 88 (166)
T cd03223 79 TLREQLIY--------------------------------------------------------------P--------W 88 (166)
T ss_pred cHHHHhhc--------------------------------------------------------------c--------C
Confidence 89888630 0 2
Q ss_pred cccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHccCCCeEEEEecCHHHHHhhcCeEEEEecc
Q 005532 257 VASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGKQDVPMVIISHDRAFLDQLCTKIVETEMG 332 (692)
Q Consensus 257 ~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~~~~tvI~vsHd~~~l~~~~d~i~~l~~G 332 (692)
+.+||||||||++|||||+.+|++|||||||++||+.+++++.+.|++.+.|+|+||||.++. .+||+|++++++
T Consensus 89 ~~~LS~G~~~rv~laral~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~tiiivsh~~~~~-~~~d~i~~l~~~ 163 (166)
T cd03223 89 DDVLSGGEQQRLAFARLLLHKPKFVFLDEATSALDEESEDRLYQLLKELGITVISVGHRPSLW-KFHDRVLDLDGE 163 (166)
T ss_pred CCCCCHHHHHHHHHHHHHHcCCCEEEEECCccccCHHHHHHHHHHHHHhCCEEEEEeCChhHH-hhCCEEEEEcCC
Confidence 578999999999999999999999999999999999999999999988889999999999876 589999999765
No 400
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.8e-38 Score=326.91 Aligned_cols=204 Identities=25% Similarity=0.363 Sum_probs=170.8
Q ss_pred ceEEEEeEEEEcCCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcC---CCC--CeeEEEECCccce--------
Q 005532 423 SVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGL---EKP--RGGEVLLGEHNVL-------- 489 (692)
Q Consensus 423 ~~l~~~~l~~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~---~~p--~~G~i~~~~~~~~-------- 489 (692)
++|+++|+++.|+++.+|+++||+|++||++||+|+||||||||+++|+|+ .+| ++|+|.++|.++.
T Consensus 2 ~~l~~~~~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~~ 81 (250)
T PRK14245 2 VKIDARDVNFWYGDFHALKGISMEIEEKSVVAFIGPSGCGKSTFLRLFNRMNDLIPATRLEGEIRIDGRNIYDKGVQVDE 81 (250)
T ss_pred cEEEEEEEEEEECCEeEEeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhhhhcccCCCCCceEEEECCEecccccccHHH
Confidence 579999999999988899999999999999999999999999999999997 454 5899999986542
Q ss_pred ----eeeecccchhhcCCCccHHHHHHHHhcc-------ccHHHHHHHHhhcCCCc---ccccccCCCCCHHHHHHHHHH
Q 005532 490 ----PNYFEQNQAEALDLDKTVLETVAEAAED-------WRIDDIKGLLGRCNFKA---DMLDRKVSLLSGGEKARLAFC 555 (692)
Q Consensus 490 ----~~~~~q~~~~~l~~~~tv~e~~~~~~~~-------~~~~~~~~~L~~~~l~~---~~~~~~~~~LSgGqkqrv~LA 555 (692)
.+|++|+. .+.. .|+.+|+...... +....+.++++.+++.. ...++++.+|||||||||+||
T Consensus 82 ~~~~i~~v~q~~--~~~~-~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~G~~qrv~la 158 (250)
T PRK14245 82 LRKNVGMVFQRP--NPFP-KSIFENVAYGLRVNGVKDNAFIRQRVEETLKGAALWDEVKDKLKESAFALSGGQQQRLCIA 158 (250)
T ss_pred HhhheEEEecCC--ccCc-ccHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCCcchhhhhhCCcccCCHHHHHHHHHH
Confidence 34555543 3433 5999998753211 11234678889898842 346788999999999999999
Q ss_pred HHhccCCcEEEEeCCCCCCCHHHHHHHHHHHHhcC--ceEEEEecCHHHHHhhccEEEEEECCEEEEecCChhHHHH
Q 005532 556 KFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEYK--GTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYYLE 630 (692)
Q Consensus 556 ral~~~p~lLlLDEPTn~LD~~~~~~l~~~l~~~~--~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~~~~~ 630 (692)
|||+.+|+||||||||++||+.+++++.+.|+++. .|||+||||++++..+||+|++|++|++.. .|..+++.+
T Consensus 159 ral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~v~~l~~G~~~~-~~~~~~~~~ 234 (250)
T PRK14245 159 RAMAVSPSVLLMDEPASALDPISTAKVEELIHELKKDYTIVIVTHNMQQAARVSDKTAFFYMGEMVE-YDDTKKIFT 234 (250)
T ss_pred HHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhCCEEEEEECCEEEE-ECCHHHHhc
Confidence 99999999999999999999999999999998763 599999999999999999999999999974 477666643
No 401
>PRK14254 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.5e-38 Score=332.03 Aligned_cols=205 Identities=27% Similarity=0.422 Sum_probs=172.2
Q ss_pred CCCceEEEEeEEEEcCCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCC-----CCeeEEEECCccce-----
Q 005532 420 SGRSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEK-----PRGGEVLLGEHNVL----- 489 (692)
Q Consensus 420 ~~~~~l~~~~l~~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~-----p~~G~i~~~~~~~~----- 489 (692)
.++++|+++||++.|+++.+|+++||+|++||++||+|+||||||||+++|+|+++ |++|+|.++|.++.
T Consensus 35 ~~~~~l~i~~l~~~~~~~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~I~i~G~~i~~~~~~ 114 (285)
T PRK14254 35 SGETVIEARDLNVFYGDEQALDDVSMDIPENQVTAMIGPSGCGKSTFLRCINRMNDLIDAARVEGELTFRGKNVYDADVD 114 (285)
T ss_pred CCCceEEEEEEEEEECCEeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccc
Confidence 46678999999999998889999999999999999999999999999999999987 68999999886541
Q ss_pred -------eeeecccchhhcCCCccHHHHHHHHhcc--c---cHHHHHHHHhhcCCCc---ccccccCCCCCHHHHHHHHH
Q 005532 490 -------PNYFEQNQAEALDLDKTVLETVAEAAED--W---RIDDIKGLLGRCNFKA---DMLDRKVSLLSGGEKARLAF 554 (692)
Q Consensus 490 -------~~~~~q~~~~~l~~~~tv~e~~~~~~~~--~---~~~~~~~~L~~~~l~~---~~~~~~~~~LSgGqkqrv~L 554 (692)
.+|++|+. .+.+ .|+.+|+...... . ...++..+++.+++.. ...++++.+|||||||||+|
T Consensus 115 ~~~~~~~i~~v~q~~--~l~~-~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~~~~~~~~~~LSgGe~qrv~L 191 (285)
T PRK14254 115 PVALRRRIGMVFQKP--NPFP-KSIYDNVAYGLKIQGYDGDIDERVEESLRRAALWDEVKDQLDSSGLDLSGGQQQRLCI 191 (285)
T ss_pred hHhhhccEEEEecCC--ccCc-CCHHHHHHHHHHHcCCcHHHHHHHHHHHHHcCCCchhHHHHhCCcccCCHHHHHHHHH
Confidence 34666653 3444 4999998754211 1 1235778898988842 34678999999999999999
Q ss_pred HHHhccCCcEEEEeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhccEEE-EEECCEEEEecCChhHH
Q 005532 555 CKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY--KGTVITVSHDRYFVKQIVNRVV-EVKGSNLQDYAGDYNYY 628 (692)
Q Consensus 555 Aral~~~p~lLlLDEPTn~LD~~~~~~l~~~l~~~--~~tviivSHd~~~l~~~~d~i~-~l~~g~l~~~~g~~~~~ 628 (692)
||||+.+|+||||||||++||+.+++.+.++|+++ +.|||+||||++++..+|||++ +|++|++... |..+++
T Consensus 192 AraL~~~p~lLLLDEPts~LD~~~~~~l~~~L~~~~~~~tiii~tH~~~~i~~~~dri~v~l~~G~i~~~-g~~~~~ 267 (285)
T PRK14254 192 ARAIAPDPEVILMDEPASALDPVATSKIEDLIEELAEEYTVVIVTHNMQQAARISDKTAVFLTGGELVEF-DDTDKI 267 (285)
T ss_pred HHHHHcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCEEEEEeeCCEEEEe-CCHHHH
Confidence 99999999999999999999999999999999877 3699999999999999999975 5799999854 655544
No 402
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=1.4e-38 Score=343.36 Aligned_cols=195 Identities=24% Similarity=0.376 Sum_probs=169.3
Q ss_pred EEcCCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccce--------------eeeecccc
Q 005532 432 FGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL--------------PNYFEQNQ 497 (692)
Q Consensus 432 ~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~~--------------~~~~~q~~ 497 (692)
+.|+++.+|+|+||+|++||+++|+|||||||||||++|+|+++|++|+|.++|.++. .+|++|+
T Consensus 1 ~~~~~~~~l~~vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~p~~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~- 79 (363)
T TIGR01186 1 KKTGGKKGVNDADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIEPTAGQIFIDGENIMKQSPVELREVRRKKIGMVFQQ- 79 (363)
T ss_pred CccCCceeEEeeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHHHhCcEEEEECC-
Confidence 3578888999999999999999999999999999999999999999999999986542 3566664
Q ss_pred hhhcCCCccHHHHHHHHhc--ccc----HHHHHHHHhhcCCCcccccccCCCCCHHHHHHHHHHHHhccCCcEEEEeCCC
Q 005532 498 AEALDLDKTVLETVAEAAE--DWR----IDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPT 571 (692)
Q Consensus 498 ~~~l~~~~tv~e~~~~~~~--~~~----~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~LAral~~~p~lLlLDEPT 571 (692)
..+++.+|+.+|+..... .+. .+.+.++|+.+|+. ...++++.+|||||||||+|||||+.+|+||||||||
T Consensus 80 -~~l~~~~TV~eNi~~~~~~~~~~~~~~~~~~~~~l~~vgL~-~~~~~~p~~LSGGq~QRV~lARAL~~~p~iLLlDEP~ 157 (363)
T TIGR01186 80 -FALFPHMTILQNTSLGPELLGWPEQERKEKALELLKLVGLE-EYEHRYPDELSGGMQQRVGLARALAAEPDILLMDEAF 157 (363)
T ss_pred -CcCCCCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCc-hhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCc
Confidence 467788999999976532 122 24578899999994 6789999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEECCEEEEecCChhHHHH
Q 005532 572 NHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYYLE 630 (692)
Q Consensus 572 n~LD~~~~~~l~~~l~~~----~~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~~~~~ 630 (692)
++||+.+++.+.+.|.++ +.|||+||||++++.++||+|++|++|+++. .|..+++..
T Consensus 158 saLD~~~r~~l~~~l~~l~~~~~~Tii~vTHd~~ea~~~~drI~vl~~G~iv~-~g~~~ei~~ 219 (363)
T TIGR01186 158 SALDPLIRDSMQDELKKLQATLQKTIVFITHDLDEAIRIGDRIVIMKAGEIVQ-VGTPDEILR 219 (363)
T ss_pred ccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEe-eCCHHHHHh
Confidence 999999999999988754 5699999999999999999999999999975 466666544
No 403
>TIGR03269 met_CoM_red_A2 methyl coenzyme M reductase system, component A2. The enzyme that catalyzes the final step in methanogenesis, methyl coenzyme M reductase, contains alpha, beta, and gamma chains. In older literature, the complex of alpha, beta, and gamma chains was termed component C, while this single chain protein was termed methyl coenzyme M reductase system component A2.
Probab=100.00 E-value=1.8e-38 Score=361.86 Aligned_cols=207 Identities=31% Similarity=0.461 Sum_probs=172.8
Q ss_pred CCcEEEEeEEEEeCC-----eeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEEC-CC---------
Q 005532 95 SSGVKLENISKSYKG-----VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKA-KS--------- 159 (692)
Q Consensus 95 ~~~l~i~~ls~~y~~-----~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~-~~--------- 159 (692)
.++|+++|++++|++ +++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++ |.
T Consensus 277 ~~~l~~~~l~~~~~~~~~~~~~il~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~~g~~~~~~~~~~ 356 (520)
T TIGR03269 277 EPIIKVRNVSKRYISVDRGVVKAVDNVSLEVKEGEIFGIVGTSGAGKTTLSKIIAGVLEPTSGEVNVRVGDEWVDMTKPG 356 (520)
T ss_pred CceEEEeccEEEeccCCCCCceEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEEecCCccccccccc
Confidence 457999999999952 469999999999999999999999999999999999999999999984 31
Q ss_pred -------CceEEEEcccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCc
Q 005532 160 -------NMKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNL 232 (692)
Q Consensus 160 -------~~~i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (692)
...|+|++|++.+++..||.+|+...+. +. ...
T Consensus 357 ~~~~~~~~~~i~~v~q~~~l~~~~tv~e~l~~~~~---------------~~-------------------------~~~ 396 (520)
T TIGR03269 357 PDGRGRAKRYIGILHQEYDLYPHRTVLDNLTEAIG---------------LE-------------------------LPD 396 (520)
T ss_pred hhhHHHHhhhEEEEccCcccCCCCcHHHHHHHHHH---------------cC-------------------------CCH
Confidence 1249999999888788899999853210 00 000
Q ss_pred ccHHHHHHHHhhhcCCCc----cccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHc----c
Q 005532 233 DTLDAKVSKLMPELGFTA----DDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG----K 304 (692)
Q Consensus 233 ~~~~~~i~~ll~~lgl~~----~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~----~ 304 (692)
.....++.++++.+|+.. ...++++.+|||||||||+|||||+.+|+||||||||++||+.+++.+.++|+ +
T Consensus 397 ~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LSgGq~qrv~laral~~~p~lLllDEPt~~LD~~~~~~l~~~l~~l~~~ 476 (520)
T TIGR03269 397 ELARMKAVITLKMVGFDEEKAEEILDKYPDELSEGERHRVALAQVLIKEPRIVILDEPTGTMDPITKVDVTHSILKAREE 476 (520)
T ss_pred HHHHHHHHHHHHhCCCCCccchhhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHH
Confidence 012245667888899863 24689999999999999999999999999999999999999999999988774 3
Q ss_pred CCCeEEEEecCHHHHHhhcCeEEEEecceEEEeccChH
Q 005532 305 QDVPMVIISHDRAFLDQLCTKIVETEMGVSRTYEGNYS 342 (692)
Q Consensus 305 ~~~tvI~vsHd~~~l~~~~d~i~~l~~G~~~~~~G~y~ 342 (692)
.+.|||+||||++++..+||+|+++++|++. +.|...
T Consensus 477 ~g~tvi~vsHd~~~~~~~~d~i~~l~~G~i~-~~g~~~ 513 (520)
T TIGR03269 477 MEQTFIIVSHDMDFVLDVCDRAALMRDGKIV-KIGDPE 513 (520)
T ss_pred cCcEEEEEeCCHHHHHHhCCEEEEEECCEEE-EECCHH
Confidence 5899999999999999999999999999974 556543
No 404
>TIGR01277 thiQ thiamine ABC transporter, ATP-binding protein. This model describes the energy-transducing ATPase subunit ThiQ of the ThiBPQ thiamine (and thiamine pyrophosphate) ABC transporter in several Proteobacteria. This protein is found so far only in Proteobacteria, and is found in complete genomes only if the ThiB and ThiP subunits are also found.
Probab=100.00 E-value=2.4e-38 Score=319.61 Aligned_cols=192 Identities=27% Similarity=0.448 Sum_probs=165.6
Q ss_pred EEEEeEEEEcCCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccce--------eeeeccc
Q 005532 425 VTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL--------PNYFEQN 496 (692)
Q Consensus 425 l~~~~l~~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~~--------~~~~~q~ 496 (692)
++++||++.|+. .+.++||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.++. .+|++|+
T Consensus 1 ~~~~~l~~~~~~--~~~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~i~~v~q~ 78 (213)
T TIGR01277 1 LALDKVRYEYEH--LPMEFDLNVADGEIVAIMGPSGAGKSTLLNLIAGFIEPASGSIKVNDQSHTGLAPYQRPVSMLFQE 78 (213)
T ss_pred CeEEeeeEEeCC--cceeeEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEEcccCChhccceEEEecc
Confidence 468999999974 578999999999999999999999999999999999999999999987642 3466665
Q ss_pred chhhcCCCccHHHHHHHHhc-c-c----cHHHHHHHHhhcCCCcccccccCCCCCHHHHHHHHHHHHhccCCcEEEEeCC
Q 005532 497 QAEALDLDKTVLETVAEAAE-D-W----RIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEP 570 (692)
Q Consensus 497 ~~~~l~~~~tv~e~~~~~~~-~-~----~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~LAral~~~p~lLlLDEP 570 (692)
+ .+++..|+.+|+..... . . ....+.++++.+++. +..++++.+|||||||||+|||||+.+|+|||||||
T Consensus 79 ~--~~~~~~t~~en~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LS~G~~qrl~laral~~~p~llllDEP 155 (213)
T TIGR01277 79 N--NLFAHLTVRQNIGLGLHPGLKLNAEQQEKVVDAAQQVGIA-DYLDRLPEQLSGGQRQRVALARCLVRPNPILLLDEP 155 (213)
T ss_pred C--ccCCCCcHHHHHHhHhhccCCccHHHHHHHHHHHHHcCcH-HHhhCCcccCCHHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 3 46667899999875321 1 1 123567889999995 567899999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEECCEEEEe
Q 005532 571 TNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDY 621 (692)
Q Consensus 571 Tn~LD~~~~~~l~~~l~~~----~~tviivSHd~~~l~~~~d~i~~l~~g~l~~~ 621 (692)
|++||+.+++.+.++|.++ +.|||+||||.+++..+||++++|++|++...
T Consensus 156 t~~LD~~~~~~~~~~l~~~~~~~~~tii~vsh~~~~~~~~~d~v~~l~~g~i~~~ 210 (213)
T TIGR01277 156 FSALDPLLREEMLALVKQLCSERQRTLLMVTHHLSDARAIASQIAVVSQGKIKVV 210 (213)
T ss_pred CccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCeEEEEECCeEEEe
Confidence 9999999999999988764 45999999999999999999999999999754
No 405
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.6e-38 Score=332.05 Aligned_cols=203 Identities=27% Similarity=0.428 Sum_probs=173.3
Q ss_pred ceEEEEeEEEEcCC--eecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccce----------e
Q 005532 423 SVVTIKNLEFGYED--RLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL----------P 490 (692)
Q Consensus 423 ~~l~~~~l~~~y~~--~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~~----------~ 490 (692)
++|+++||++.|++ +++|+++||+|++||++||+|+||||||||+++|+|+++|++|+|.++|.++. .
T Consensus 4 ~~l~~~~l~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~p~~G~i~~~g~~i~~~~~~~~~~~i 83 (279)
T PRK13635 4 EIIRVEHISFRYPDAATYALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLLPEAGTITVGGMVLSEETVWDVRRQV 83 (279)
T ss_pred ceEEEEEEEEEeCCCCccceeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHhhhe
Confidence 47999999999974 56999999999999999999999999999999999999999999999987652 3
Q ss_pred eeecccchhhcCCCccHHHHHHHHhccc--c----HHHHHHHHhhcCCCcccccccCCCCCHHHHHHHHHHHHhccCCcE
Q 005532 491 NYFEQNQAEALDLDKTVLETVAEAAEDW--R----IDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTL 564 (692)
Q Consensus 491 ~~~~q~~~~~l~~~~tv~e~~~~~~~~~--~----~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~LAral~~~p~l 564 (692)
+|++|+.. .+.+..|+.+|+....... . ...+..+++.+|+. ...++++.+|||||||||+|||||+.+|+|
T Consensus 84 ~~~~q~~~-~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~gL~-~~~~~~~~~LS~G~~qrv~laral~~~p~l 161 (279)
T PRK13635 84 GMVFQNPD-NQFVGATVQDDVAFGLENIGVPREEMVERVDQALRQVGME-DFLNREPHRLSGGQKQRVAIAGVLALQPDI 161 (279)
T ss_pred EEEEeCHH-HhcccccHHHHHhhhHhhCCCCHHHHHHHHHHHHHHcCCh-hhhhCCcccCCHHHHHHHHHHHHHHcCCCE
Confidence 56666532 2345679999997542211 1 23478889999995 678999999999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEECCEEEEecCChhHHH
Q 005532 565 LVLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYYL 629 (692)
Q Consensus 565 LlLDEPTn~LD~~~~~~l~~~l~~~----~~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~~~~ 629 (692)
|||||||++||+.++..+.+.|+++ +.|||+||||++++.. ||+|++|++|++. +.|+.++..
T Consensus 162 llLDEPt~gLD~~~~~~l~~~l~~l~~~~~~tilivsH~~~~~~~-~d~i~~l~~G~i~-~~g~~~~~~ 228 (279)
T PRK13635 162 IILDEATSMLDPRGRREVLETVRQLKEQKGITVLSITHDLDEAAQ-ADRVIVMNKGEIL-EEGTPEEIF 228 (279)
T ss_pred EEEeCCcccCCHHHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHc-CCEEEEEECCEEE-EECCHHHHh
Confidence 9999999999999999999999864 4599999999999975 9999999999987 457766554
No 406
>cd03245 ABCC_bacteriocin_exporters ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.
Probab=100.00 E-value=1.7e-38 Score=322.20 Aligned_cols=191 Identities=30% Similarity=0.501 Sum_probs=161.1
Q ss_pred EEEEeEEEEcCC--eecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccc----------eeee
Q 005532 425 VTIKNLEFGYED--RLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNV----------LPNY 492 (692)
Q Consensus 425 l~~~~l~~~y~~--~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~----------~~~~ 492 (692)
|+++|+++.|++ +.+|+++||+|++|++++|+||||||||||+++|+|+.+|++|+|.++|.++ ..+|
T Consensus 3 l~~~~l~~~~~~~~~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 82 (220)
T cd03245 3 IEFRNVSFSYPNQEIPALDNVSLTIRAGEKVAIIGRVGSGKSTLLKLLAGLYKPTSGSVLLDGTDIRQLDPADLRRNIGY 82 (220)
T ss_pred EEEEEEEEEcCCCCcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCeEEECCEEhHHCCHHHHHhhEEE
Confidence 789999999975 5799999999999999999999999999999999999999999999988654 1356
Q ss_pred ecccchhhcCCCccHHHHHHHHhccccHHHHHHHHhhcCCCcccccc-----------cCCCCCHHHHHHHHHHHHhccC
Q 005532 493 FEQNQAEALDLDKTVLETVAEAAEDWRIDDIKGLLGRCNFKADMLDR-----------KVSLLSGGEKARLAFCKFMVKP 561 (692)
Q Consensus 493 ~~q~~~~~l~~~~tv~e~~~~~~~~~~~~~~~~~L~~~~l~~~~~~~-----------~~~~LSgGqkqrv~LAral~~~ 561 (692)
++|+. .+.+ .|+.+|+...........+..+++.+++. +..++ .+.+|||||||||+|||||+.+
T Consensus 83 ~~q~~--~~~~-~tv~e~l~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~~~~~~~~~~~~LSgG~~qrl~la~al~~~ 158 (220)
T cd03245 83 VPQDV--TLFY-GTLRDNITLGAPLADDERILRAAELAGVT-DFVNKHPNGLDLQIGERGRGLSGGQRQAVALARALLND 158 (220)
T ss_pred eCCCC--cccc-chHHHHhhcCCCCCCHHHHHHHHHHcCcH-HHHHhccccccceecCCCccCCHHHHHHHHHHHHHhcC
Confidence 66653 3333 69999986543222334566777777774 33444 3469999999999999999999
Q ss_pred CcEEEEeCCCCCCCHHHHHHHHHHHHhcC--ceEEEEecCHHHHHhhccEEEEEECCEEEE
Q 005532 562 STLLVLDEPTNHLDIPSKEMLEEAISEYK--GTVITVSHDRYFVKQIVNRVVEVKGSNLQD 620 (692)
Q Consensus 562 p~lLlLDEPTn~LD~~~~~~l~~~l~~~~--~tviivSHd~~~l~~~~d~i~~l~~g~l~~ 620 (692)
|++|||||||++||+.++..+.+.|+++. .|||+||||++++ .+||++++|++|++..
T Consensus 159 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~-~~~d~v~~l~~g~i~~ 218 (220)
T cd03245 159 PPILLLDEPTSAMDMNSEERLKERLRQLLGDKTLIIITHRPSLL-DLVDRIIVMDSGRIVA 218 (220)
T ss_pred CCEEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHH-HhCCEEEEEeCCeEee
Confidence 99999999999999999999999998874 5999999999987 6899999999999864
No 407
>PRK13539 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=1.4e-38 Score=319.92 Aligned_cols=189 Identities=21% Similarity=0.308 Sum_probs=161.3
Q ss_pred cEEEEeEEEEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC-------ceEEEEccc
Q 005532 97 GVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN-------MKIAFLSQE 169 (692)
Q Consensus 97 ~l~i~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~-------~~i~~v~Q~ 169 (692)
+|+++|+++.|+++.+|+|+||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|.. ..++|++|.
T Consensus 2 ~l~~~~l~~~~~~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~ 81 (207)
T PRK13539 2 MLEGEDLACVRGGRVLFSGLSFTLAAGEALVLTGPNGSGKTTLLRLIAGLLPPAAGTIKLDGGDIDDPDVAEACHYLGHR 81 (207)
T ss_pred EEEEEeEEEEECCeEEEeceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEeCcchhhHhhcEEecCC
Confidence 5899999999998889999999999999999999999999999999999999999999998743 248999998
Q ss_pred CccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHHhhhcCCC
Q 005532 170 FEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFT 249 (692)
Q Consensus 170 ~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl~ 249 (692)
+.+++..|+.+|+..... + .+ ..+.++.++++.+|+.
T Consensus 82 ~~~~~~~tv~~~l~~~~~---------------~--------------------------~~--~~~~~~~~~l~~~~l~ 118 (207)
T PRK13539 82 NAMKPALTVAENLEFWAA---------------F--------------------------LG--GEELDIAAALEAVGLA 118 (207)
T ss_pred CcCCCCCcHHHHHHHHHH---------------h--------------------------cC--CcHHHHHHHHHHcCCH
Confidence 877778899999742100 0 00 0012356778888886
Q ss_pred ccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc---CCCeEEEEecCHHHHHhhcCeE
Q 005532 250 ADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK---QDVPMVIISHDRAFLDQLCTKI 326 (692)
Q Consensus 250 ~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~---~~~tvI~vsHd~~~l~~~~d~i 326 (692)
...++++.+||||||||++|||||+.+|++|||||||++||+.+++++.++|++ .+.|||+|||+++++.. |++
T Consensus 119 -~~~~~~~~~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~--~~~ 195 (207)
T PRK13539 119 -PLAHLPFGYLSAGQKRRVALARLLVSNRPIWILDEPTAALDAAAVALFAELIRAHLAQGGIVIAATHIPLGLPG--ARE 195 (207)
T ss_pred -HHHcCChhhcCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCchhhcc--CcE
Confidence 466888999999999999999999999999999999999999999999887753 58999999999999987 888
Q ss_pred EEEec
Q 005532 327 VETEM 331 (692)
Q Consensus 327 ~~l~~ 331 (692)
+.++.
T Consensus 196 ~~~~~ 200 (207)
T PRK13539 196 LDLGP 200 (207)
T ss_pred EeecC
Confidence 87743
No 408
>cd03234 ABCG_White The White subfamily represents ABC transporters homologous to the Drosophila white gene, which acts as a dimeric importer for eye pigment precursors. The eye pigmentation of Drosophila is developed from the synthesis and deposition in the cells of red pigments, which are synthesized from guanine, and brown pigments, which are synthesized from tryptophan. The pigment precursors are encoded by the white, brown, and scarlet genes, respectively. Evidence from genetic and biochemical studies suggest that the White and Brown proteins function as heterodimers to import guanine, while the White and Scarlet proteins function to import tryptophan. However, a recent study also suggests that White may be involved in the transport of a metabolite, such as 3-hydroxykynurenine, across intracellular membranes. Mammalian ABC transporters belonging to the White subfamily (ABCG1, ABCG5, and ABCG8) have been shown to be involved in the regulation of lipid-trafficking mechanisms in
Probab=100.00 E-value=1.6e-38 Score=323.84 Aligned_cols=201 Identities=28% Similarity=0.356 Sum_probs=165.2
Q ss_pred EEEEeEEEEeCC----eeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCC---CCccEEEECCCC-------ceE
Q 005532 98 VKLENISKSYKG----VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEE---PDSGNVIKAKSN-------MKI 163 (692)
Q Consensus 98 l~i~~ls~~y~~----~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~---p~~G~I~~~~~~-------~~i 163 (692)
+.++|+++.|++ +++|+|+||+|++|++++|+||||||||||+++|+|+++ |++|+|.++|.+ ..|
T Consensus 4 ~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLlk~l~G~~~~~~~~~G~i~~~g~~~~~~~~~~~i 83 (226)
T cd03234 4 LPWWDVGLKAKNWNKYARILNDVSLHVESGQVMAILGSSGSGKTTLLDAISGRVEGGGTTSGQILFNGQPRKPDQFQKCV 83 (226)
T ss_pred ceeecceeeeecCccccccccCceEEEcCCeEEEEECCCCCCHHHHHHHHhCccCCCCCCceEEEECCEECChHHhcccE
Confidence 678999999975 479999999999999999999999999999999999999 999999998743 359
Q ss_pred EEEcccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHH-H
Q 005532 164 AFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSK-L 242 (692)
Q Consensus 164 ~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-l 242 (692)
+|++|++.+++..|+.||+....... ... .........++.. +
T Consensus 84 ~~~~q~~~~~~~~tv~enl~~~~~~~-------------~~~-----------------------~~~~~~~~~~~~~~~ 127 (226)
T cd03234 84 AYVRQDDILLPGLTVRETLTYTAILR-------------LPR-----------------------KSSDAIRKKRVEDVL 127 (226)
T ss_pred EEeCCCCccCcCCcHHHHHHHHHHhh-------------ccc-----------------------ccchHHHHHHHHHHH
Confidence 99999998878889999985321000 000 0000001122333 6
Q ss_pred hhhcCCCccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHc---cCCCeEEEEecCH-HH
Q 005532 243 MPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG---KQDVPMVIISHDR-AF 318 (692)
Q Consensus 243 l~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~---~~~~tvI~vsHd~-~~ 318 (692)
++.+++. ...++.+.+|||||+|||+|||||+.+|++|||||||++||+.++..+.+.|+ +.+.|+|++||+. +.
T Consensus 128 l~~~~l~-~~~~~~~~~LS~G~~qrl~laral~~~p~illlDEP~~gLD~~~~~~~~~~l~~~~~~~~tiii~sh~~~~~ 206 (226)
T cd03234 128 LRDLALT-RIGGNLVKGISGGERRRVSIAVQLLWDPKVLILDEPTSGLDSFTALNLVSTLSQLARRNRIVILTIHQPRSD 206 (226)
T ss_pred HHhhcch-hhhcccccCcCHHHHHHHHHHHHHHhCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCCCHH
Confidence 7777775 45678899999999999999999999999999999999999999999988774 3478999999998 68
Q ss_pred HHhhcCeEEEEecceEE
Q 005532 319 LDQLCTKIVETEMGVSR 335 (692)
Q Consensus 319 l~~~~d~i~~l~~G~~~ 335 (692)
+..+||+|+++++|++.
T Consensus 207 ~~~~~d~i~~l~~G~i~ 223 (226)
T cd03234 207 LFRLFDRILLLSSGEIV 223 (226)
T ss_pred HHHhCCEEEEEeCCEEE
Confidence 99999999999999874
No 409
>COG0444 DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=3e-38 Score=324.93 Aligned_cols=206 Identities=22% Similarity=0.383 Sum_probs=171.0
Q ss_pred EEEEeEEEEeCC----eeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCC-C----CccEEEECCCC--------
Q 005532 98 VKLENISKSYKG----VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEE-P----DSGNVIKAKSN-------- 160 (692)
Q Consensus 98 l~i~~ls~~y~~----~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~-p----~~G~I~~~~~~-------- 160 (692)
++++|++.+|.. .++++||||+|++||++||||++||||||+.+.|+|+++ | .+|+|.++|.+
T Consensus 2 L~v~nL~v~f~~~~g~v~av~~vs~~i~~GE~lgiVGESGsGKS~~~~aim~llp~~~~~i~~G~i~f~g~~l~~l~~~~ 81 (316)
T COG0444 2 LEVKNLSVSFPTDAGVVKAVDGVSFELKKGEILGIVGESGSGKSVLAKAIMGLLPKPNARIVGGEILFDGKDLLSLSEKE 81 (316)
T ss_pred ceEeeeEEEEecCCccEEEEeceeEEEcCCcEEEEEcCCCCCHHHHHHHHHhccCCCCCeEeeeEEEECCcccccCCHHH
Confidence 789999999954 369999999999999999999999999999999999998 4 56899998752
Q ss_pred ------ceEEEEcccCc--cCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhc-C
Q 005532 161 ------MKIAFLSQEFE--VSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAV-N 231 (692)
Q Consensus 161 ------~~i~~v~Q~~~--~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 231 (692)
..|+|++|+|. +.+..||.+-+...+.. .... .
T Consensus 82 ~~~iRG~~I~mIfQ~p~~sLnPv~~Ig~Qi~E~l~~--------------------------------------h~~~~~ 123 (316)
T COG0444 82 LRKIRGKEIAMIFQDPMTSLNPVMTIGDQIAEVLRL--------------------------------------HGKGLS 123 (316)
T ss_pred HHhhcCceEEEEEcCchhhcCChhhHHHHHHHHHHH--------------------------------------hhcchh
Confidence 36999999984 44556777665322110 0000 1
Q ss_pred cccHHHHHHHHhhhcCCCcc--ccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHc----cC
Q 005532 232 LDTLDAKVSKLMPELGFTAD--DGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG----KQ 305 (692)
Q Consensus 232 ~~~~~~~i~~ll~~lgl~~~--~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~----~~ 305 (692)
..+..+++.++|+.+||++. ..+.++.+|||||+|||.||.||+.+|+|||.||||++||......+.++|+ +.
T Consensus 124 ~~ea~~~a~~~L~~Vgi~~~~~~~~~YPhelSGGMrQRV~IAmala~~P~LlIADEPTTALDvt~QaqIl~Ll~~l~~e~ 203 (316)
T COG0444 124 KKEAKERAIELLELVGIPDPERRLKSYPHELSGGMRQRVMIAMALALNPKLLIADEPTTALDVTVQAQILDLLKELQREK 203 (316)
T ss_pred hHHHHHHHHHHHHHcCCCCHHHHHhhCCcccCCcHHHHHHHHHHHhCCCCEEEeCCCcchhhHHHHHHHHHHHHHHHHhc
Confidence 12345678889999999865 6789999999999999999999999999999999999999999998888764 47
Q ss_pred CCeEEEEecCHHHHHhhcCeEEEEecceEEEeccChH
Q 005532 306 DVPMVIISHDRAFLDQLCTKIVETEMGVSRTYEGNYS 342 (692)
Q Consensus 306 ~~tvI~vsHd~~~l~~~~d~i~~l~~G~~~~~~G~y~ 342 (692)
|.|+|+||||+..+.++||+|++|..|++.. .|+..
T Consensus 204 ~~aiilITHDl~vva~~aDri~VMYaG~iVE-~g~~~ 239 (316)
T COG0444 204 GTALILITHDLGVVAEIADRVAVMYAGRIVE-EGPVE 239 (316)
T ss_pred CCEEEEEeCCHHHHHHhcceEEEEECcEEEE-eCCHH
Confidence 9999999999999999999999999999854 45543
No 410
>PRK14239 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.9e-38 Score=326.25 Aligned_cols=203 Identities=24% Similarity=0.335 Sum_probs=169.3
Q ss_pred ceEEEEeEEEEcCCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCC--CC---CeeEEEECCccce--------
Q 005532 423 SVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLE--KP---RGGEVLLGEHNVL-------- 489 (692)
Q Consensus 423 ~~l~~~~l~~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~--~p---~~G~i~~~~~~~~-------- 489 (692)
++|+++||+++|+++.+|+++||+|++||++||+||||||||||+++|+|+. .| ++|+|.++|.++.
T Consensus 4 ~~l~~~~l~~~~~~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~i~~~g~~~~~~~~~~~~ 83 (252)
T PRK14239 4 PILQVSDLSVYYNKKKALNSVSLDFYPNEITALIGPSGSGKSTLLRSINRMNDLNPEVTITGSIVYNGHNIYSPRTDTVD 83 (252)
T ss_pred ceEEEEeeEEEECCeeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhcccccCCCCCccceEEECCEECcCcccchHh
Confidence 4799999999999888999999999999999999999999999999999985 46 5999999986541
Q ss_pred ----eeeecccchhhcCCCccHHHHHHHHhcc---cc----HHHHHHHHhhcCCCc---ccccccCCCCCHHHHHHHHHH
Q 005532 490 ----PNYFEQNQAEALDLDKTVLETVAEAAED---WR----IDDIKGLLGRCNFKA---DMLDRKVSLLSGGEKARLAFC 555 (692)
Q Consensus 490 ----~~~~~q~~~~~l~~~~tv~e~~~~~~~~---~~----~~~~~~~L~~~~l~~---~~~~~~~~~LSgGqkqrv~LA 555 (692)
.+|++|+. .+.. .|+.+|+...... .. ...+..+++.+++.. +..++++.+|||||||||+||
T Consensus 84 ~~~~i~~v~q~~--~~~~-~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~G~~qrv~la 160 (252)
T PRK14239 84 LRKEIGMVFQQP--NPFP-MSIYENVVYGLRLKGIKDKQVLDEAVEKSLKGASIWDEVKDRLHDSALGLSGGQQQRVCIA 160 (252)
T ss_pred hhhcEEEEecCC--ccCc-CcHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCchhHHHHHhcCcccCCHHHHHHHHHH
Confidence 34566653 3433 7999998754211 11 134566788888742 346788999999999999999
Q ss_pred HHhccCCcEEEEeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhccEEEEEECCEEEEecCChhHHH
Q 005532 556 KFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY--KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYYL 629 (692)
Q Consensus 556 ral~~~p~lLlLDEPTn~LD~~~~~~l~~~l~~~--~~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~~~~ 629 (692)
|||+.+|+||||||||++||+.++..+.+.|+++ +.|||+||||++++..+||+|++|++|++.. .|..++..
T Consensus 161 ral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~-~g~~~~~~ 235 (252)
T PRK14239 161 RVLATSPKIILLDEPTSALDPISAGKIEETLLGLKDDYTMLLVTRSMQQASRISDRTGFFLDGDLIE-YNDTKQMF 235 (252)
T ss_pred HHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHhhCCeEEEEECCHHHHHHhCCEEEEEECCEEEE-eCCHHHHH
Confidence 9999999999999999999999999999999876 3599999999999999999999999999985 46655543
No 411
>PRK14256 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.6e-38 Score=325.70 Aligned_cols=204 Identities=24% Similarity=0.360 Sum_probs=171.4
Q ss_pred ceEEEEeEEEEcCCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCC--C---CeeEEEECCccce--------
Q 005532 423 SVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEK--P---RGGEVLLGEHNVL-------- 489 (692)
Q Consensus 423 ~~l~~~~l~~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~--p---~~G~i~~~~~~~~-------- 489 (692)
..|+++|++++|+++.+|+|+||+|++||++||+|+||||||||+++|+|+++ | ++|+|.++|.++.
T Consensus 3 ~~l~~~nl~~~~~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~~~~ 82 (252)
T PRK14256 3 NKVKLEQLNVHFGKNHAVKDVSMDFPENSVTAIIGPSGCGKSTVLRSINRMHDLVPSARVTGKILLDDTDIYDRGVDPVS 82 (252)
T ss_pred cEEEEEEEEEEeCCeeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHHhcccCCCCCCCceEEEECCEEcccccCChHH
Confidence 35899999999998889999999999999999999999999999999999986 4 6899999986542
Q ss_pred ----eeeecccchhhcCCCccHHHHHHHHhcc---cc----HHHHHHHHhhcCCCc---ccccccCCCCCHHHHHHHHHH
Q 005532 490 ----PNYFEQNQAEALDLDKTVLETVAEAAED---WR----IDDIKGLLGRCNFKA---DMLDRKVSLLSGGEKARLAFC 555 (692)
Q Consensus 490 ----~~~~~q~~~~~l~~~~tv~e~~~~~~~~---~~----~~~~~~~L~~~~l~~---~~~~~~~~~LSgGqkqrv~LA 555 (692)
.+|++|+ ..+.+..|+.+|+...... .. ...+.++++.+++.. +..++.+.+|||||||||+||
T Consensus 83 ~~~~i~~~~q~--~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~G~~qrl~la 160 (252)
T PRK14256 83 IRRRVGMVFQK--PNPFPAMSIYDNVIAGYKLNGRVNRSEADEIVESSLKRVALWDEVKDRLKSNAMELSGGQQQRLCIA 160 (252)
T ss_pred hhccEEEEecC--CCCCCcCcHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCchhhhHHhhCCcCcCCHHHHHHHHHH
Confidence 3455554 3456678999998753211 11 134677888888743 345678999999999999999
Q ss_pred HHhccCCcEEEEeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhccEEEEEECCEEEEecCChhHHH
Q 005532 556 KFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY--KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYYL 629 (692)
Q Consensus 556 ral~~~p~lLlLDEPTn~LD~~~~~~l~~~l~~~--~~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~~~~ 629 (692)
|||+.+|++|||||||++||+.+++.+.+.|+++ +.|||+||||++++..+||++++|++|++... |..+++.
T Consensus 161 ral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~-~~~~~~~ 235 (252)
T PRK14256 161 RTIAVKPEVILMDEPASALDPISTLKIEELIEELKEKYTIIIVTHNMQQAARVSDYTAFFYMGDLVEC-GETKKIF 235 (252)
T ss_pred HHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCcEEEEECCHHHHHhhCCEEEEEECCEEEEe-CCHHHHH
Confidence 9999999999999999999999999999999876 45999999999999999999999999999854 6655553
No 412
>cd03250 ABCC_MRP_domain1 Domain 1 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=1.7e-38 Score=318.49 Aligned_cols=195 Identities=27% Similarity=0.385 Sum_probs=152.3
Q ss_pred EEEEeEEEEeCCe-----eceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCCceEEEEcccCcc
Q 005532 98 VKLENISKSYKGV-----TVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSNMKIAFLSQEFEV 172 (692)
Q Consensus 98 l~i~~ls~~y~~~-----~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~~~i~~v~Q~~~~ 172 (692)
|+++|++++|++. ++|+++||+|++|++++|+||||||||||+++|+|+++|++|+|.++| .|+|++|++.+
T Consensus 1 l~~~~l~~~~~~~~~~~~~il~~~s~~i~~G~~~~i~G~nG~GKSTLl~~i~G~~~~~~G~i~~~g---~i~~~~q~~~l 77 (204)
T cd03250 1 ISVEDASFTWDSGEQETSFTLKDINLEVPKGELVAIVGPVGSGKSSLLSALLGELEKLSGSVSVPG---SIAYVSQEPWI 77 (204)
T ss_pred CEEeEEEEecCCCCccccceeeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCcCCCCCCeEEEcC---EEEEEecCchh
Confidence 4689999999764 699999999999999999999999999999999999999999999986 89999999987
Q ss_pred CCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHHhhhcCCCccc
Q 005532 173 SMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFTADD 252 (692)
Q Consensus 173 ~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl~~~~ 252 (692)
+ ..|++||+....... . +......+. . .+...+... ..|+. ..
T Consensus 78 ~-~~t~~enl~~~~~~~--~----~~~~~~~~~------------------------~---~l~~~~~~~--~~~~~-~~ 120 (204)
T cd03250 78 Q-NGTIRENILFGKPFD--E----ERYEKVIKA------------------------C---ALEPDLEIL--PDGDL-TE 120 (204)
T ss_pred c-cCcHHHHhccCCCcC--H----HHHHHHHHH------------------------c---CcHHHHHhc--cCccc-ce
Confidence 5 679999986321100 0 000000000 0 000011110 11222 23
Q ss_pred cccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHH-HHc---cCCCeEEEEecCHHHHHhhcCeEEE
Q 005532 253 GDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEG-YLG---KQDVPMVIISHDRAFLDQLCTKIVE 328 (692)
Q Consensus 253 ~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~-~L~---~~~~tvI~vsHd~~~l~~~~d~i~~ 328 (692)
.++++.+||||||||++|||||+.+|++|||||||++||+.+.+++.+ +++ +.+.|||+|||+++.+.. ||++++
T Consensus 121 ~~~~~~~lS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~ll~~~~~~~~tvi~~sh~~~~~~~-~d~i~~ 199 (204)
T cd03250 121 IGEKGINLSGGQKQRISLARAVYSDADIYLLDDPLSAVDAHVGRHIFENCILGLLLNNKTRILVTHQLQLLPH-ADQIVV 199 (204)
T ss_pred ecCCCCcCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHhccCCCEEEEEeCCHHHHhh-CCEEEE
Confidence 456689999999999999999999999999999999999999988876 343 347899999999999998 999999
Q ss_pred Eecce
Q 005532 329 TEMGV 333 (692)
Q Consensus 329 l~~G~ 333 (692)
+++|+
T Consensus 200 l~~G~ 204 (204)
T cd03250 200 LDNGR 204 (204)
T ss_pred EeCCC
Confidence 98874
No 413
>TIGR01189 ccmA heme ABC exporter, ATP-binding protein CcmA. This model describes the cyt c biogenesis protein encoded by ccmA in bacteria. An exception is, an arabidopsis protein. Quite likely this is encoded by an organelle. Bacterial c-type cytocromes are located on the periplasmic side of the cytoplasmic membrane. Several gene products encoded in a locus designated as 'ccm' are implicated in the transport and assembly of the functional cytochrome C. This cluster includes genes: ccmA;B;C;D;E;F;G and H. The posttranslational pathway includes the transport of heme moiety, the secretion of the apoprotein and the covalent attachment of the heme with the apoprotein. The proteins ccmA and B represent an ABC transporter; ccmC and D participate in heme transfer to ccmE, which function as a periplasmic heme chaperone. The presence of ccmF, G and H is suggested to be obligatory for the final functional assembly of cytochrome c.
Probab=100.00 E-value=1.2e-38 Score=318.04 Aligned_cols=185 Identities=25% Similarity=0.364 Sum_probs=155.7
Q ss_pred EEEEeEEEEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC---------ceEEEEcc
Q 005532 98 VKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN---------MKIAFLSQ 168 (692)
Q Consensus 98 l~i~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~---------~~i~~v~Q 168 (692)
|+++|+++.|+++++|+++||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.+ ..++|++|
T Consensus 1 l~~~~l~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~i~~~~q 80 (198)
T TIGR01189 1 LAARNLACSRGERMLFEGLSFTLNAGEALQVTGPNGIGKTTLLRILAGLLRPDSGEVRWNGTALAEQRDEPHRNILYLGH 80 (198)
T ss_pred CEEEEEEEEECCEEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCEEcccchHHhhhheEEecc
Confidence 468999999999899999999999999999999999999999999999999999999998753 35899999
Q ss_pred cCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHHhhhcCC
Q 005532 169 EFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGF 248 (692)
Q Consensus 169 ~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl 248 (692)
++.+++..|+.+|+..... . .. .. +.++.++++.+|+
T Consensus 81 ~~~~~~~~tv~~~l~~~~~---------------~--------------------------~~-~~-~~~~~~~l~~~~l 117 (198)
T TIGR01189 81 LPGLKPELSALENLHFWAA---------------I--------------------------HG-GA-QRTIEDALAAVGL 117 (198)
T ss_pred CcccccCCcHHHHHHHHHH---------------H--------------------------cC-Cc-HHHHHHHHHHcCC
Confidence 9887777899999742100 0 00 00 2345567788888
Q ss_pred CccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc---CCCeEEEEecCHHHHHhhcCe
Q 005532 249 TADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK---QDVPMVIISHDRAFLDQLCTK 325 (692)
Q Consensus 249 ~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~---~~~tvI~vsHd~~~l~~~~d~ 325 (692)
. +..++++.+|||||||||+|||||+.+|++|||||||++||+.+++.+.++|.+ .+.|||+|||+...+ .|++
T Consensus 118 ~-~~~~~~~~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sH~~~~~--~~~~ 194 (198)
T TIGR01189 118 T-GFEDLPAAQLSAGQQRRLALARLWLSRAPLWILDEPTTALDKAGVALLAGLLRAHLARGGIVLLTTHQDLGL--VEAR 194 (198)
T ss_pred H-HHhcCChhhcCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEEEcccccc--cceE
Confidence 6 456888999999999999999999999999999999999999999999888753 588999999998655 4666
Q ss_pred EEE
Q 005532 326 IVE 328 (692)
Q Consensus 326 i~~ 328 (692)
++.
T Consensus 195 ~~~ 197 (198)
T TIGR01189 195 ELR 197 (198)
T ss_pred Eee
Confidence 654
No 414
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3e-38 Score=325.91 Aligned_cols=201 Identities=26% Similarity=0.387 Sum_probs=170.1
Q ss_pred eEEEEeEEEEcCCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCC---CCeeEEEECCccce----------e
Q 005532 424 VVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEK---PRGGEVLLGEHNVL----------P 490 (692)
Q Consensus 424 ~l~~~~l~~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~---p~~G~i~~~~~~~~----------~ 490 (692)
+++++|+++.|+++.+|+++||+|++||+++|+|+||||||||+++|+|+++ |++|+|.++|.++. .
T Consensus 2 ~~~~~~l~~~~~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~G~i~~~g~~i~~~~~~~~~~~i 81 (246)
T PRK14269 2 IAKTTNLNLFYGKKQALFDINMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKIDGLVEIEGKDVKNQDVVALRKNV 81 (246)
T ss_pred ceeeeeeEEEECCEeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCCceEEEECCEecccCCHHHHhhhE
Confidence 4789999999998889999999999999999999999999999999999974 79999999987652 3
Q ss_pred eeecccchhhcCCCccHHHHHHHHhc--cc------cHHHHHHHHhhcCCCc---ccccccCCCCCHHHHHHHHHHHHhc
Q 005532 491 NYFEQNQAEALDLDKTVLETVAEAAE--DW------RIDDIKGLLGRCNFKA---DMLDRKVSLLSGGEKARLAFCKFMV 559 (692)
Q Consensus 491 ~~~~q~~~~~l~~~~tv~e~~~~~~~--~~------~~~~~~~~L~~~~l~~---~~~~~~~~~LSgGqkqrv~LAral~ 559 (692)
+|++|.. .+.+ .|+.+|+..... .+ ...++..+++.+++.. ...++++.+|||||||||+|||||+
T Consensus 82 ~~~~q~~--~l~~-~tv~eni~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~G~~qrv~laral~ 158 (246)
T PRK14269 82 GMVFQQP--NVFV-KSIYENISYAPKLHGMIKNKDEEEALVVDCLQKVGLFEEVKDKLKQNALALSGGQQQRLCIARALA 158 (246)
T ss_pred EEEecCC--cccc-ccHHHHhhhHHhhcCcccChHHHHHHHHHHHHHcCCChhhhHHhcCCcccCCHHHHHHHHHHHHHh
Confidence 5666653 3443 699999865321 10 1224678899999852 3467889999999999999999999
Q ss_pred cCCcEEEEeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhccEEEEEECCEEEEecCChhHH
Q 005532 560 KPSTLLVLDEPTNHLDIPSKEMLEEAISEY--KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYY 628 (692)
Q Consensus 560 ~~p~lLlLDEPTn~LD~~~~~~l~~~l~~~--~~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~~~ 628 (692)
.+|+||||||||++||+.++..+.+.|.++ +.|||+||||++++..+||+|++|++|+++.. |..+++
T Consensus 159 ~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~-g~~~~~ 228 (246)
T PRK14269 159 IKPKLLLLDEPTSALDPISSGVIEELLKELSHNLSMIMVTHNMQQGKRVADYTAFFHLGELIEF-GESKEF 228 (246)
T ss_pred cCCCEEEEcCCcccCCHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhhCcEEEEEECCEEEEE-CCHHHH
Confidence 999999999999999999999999999865 46999999999999999999999999999854 555444
No 415
>PRK13540 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=1.2e-38 Score=318.64 Aligned_cols=183 Identities=21% Similarity=0.331 Sum_probs=157.0
Q ss_pred EEEEeEEEEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC---------ceEEEEcc
Q 005532 98 VKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN---------MKIAFLSQ 168 (692)
Q Consensus 98 l~i~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~---------~~i~~v~Q 168 (692)
|+++|++++|+++++|+++||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.+ ..++|++|
T Consensus 2 l~~~~l~~~~~~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~v~~~g~~~~~~~~~~~~~i~~~~q 81 (200)
T PRK13540 2 LDVIELDFDYHDQPLLQQISFHLPAGGLLHLKGSNGAGKTTLLKLIAGLLNPEKGEILFERQSIKKDLCTYQKQLCFVGH 81 (200)
T ss_pred EEEEEEEEEeCCeeEEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeeEEECCCccccCHHHHHhheEEecc
Confidence 789999999998889999999999999999999999999999999999999999999998753 25999999
Q ss_pred cCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHHhhhcCC
Q 005532 169 EFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGF 248 (692)
Q Consensus 169 ~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl 248 (692)
++.+++..||.+|+...... . ..+..+.++++.+++
T Consensus 82 ~~~~~~~~tv~~~~~~~~~~------------------------------------------~--~~~~~~~~~l~~~~l 117 (200)
T PRK13540 82 RSGINPYLTLRENCLYDIHF------------------------------------------S--PGAVGITELCRLFSL 117 (200)
T ss_pred ccccCcCCCHHHHHHHHHhc------------------------------------------C--cchHHHHHHHHHcCC
Confidence 98877789999997521100 0 001245567777888
Q ss_pred CccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc---CCCeEEEEecCHHHHHhhcCe
Q 005532 249 TADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK---QDVPMVIISHDRAFLDQLCTK 325 (692)
Q Consensus 249 ~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~---~~~tvI~vsHd~~~l~~~~d~ 325 (692)
. +..++++.+|||||+||++|||||+.+|++|||||||++||+.+++++.++|++ .+.|||+|||+.+++.. ||+
T Consensus 118 ~-~~~~~~~~~LS~G~~~rv~laral~~~p~~lilDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~~~~-~d~ 195 (200)
T PRK13540 118 E-HLIDYPCGLLSSGQKRQVALLRLWMSKAKLWLLDEPLVALDELSLLTIITKIQEHRAKGGAVLLTSHQDLPLNK-ADY 195 (200)
T ss_pred c-hhhhCChhhcCHHHHHHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHcCCEEEEEeCCchhccc-cch
Confidence 6 456888899999999999999999999999999999999999999999988763 58899999999999976 665
Q ss_pred E
Q 005532 326 I 326 (692)
Q Consensus 326 i 326 (692)
-
T Consensus 196 ~ 196 (200)
T PRK13540 196 E 196 (200)
T ss_pred h
Confidence 3
No 416
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.8e-38 Score=326.93 Aligned_cols=206 Identities=27% Similarity=0.376 Sum_probs=172.1
Q ss_pred CCceEEEEeEEEEcCCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCC--C---CeeEEEECCccce------
Q 005532 421 GRSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEK--P---RGGEVLLGEHNVL------ 489 (692)
Q Consensus 421 ~~~~l~~~~l~~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~--p---~~G~i~~~~~~~~------ 489 (692)
+.++|+++|+++.|+++.+|+++||+|++||++||+|+||||||||+++|+|+++ | ++|+|.++|.++.
T Consensus 9 ~~~~l~i~~l~~~~~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~p~~~~~G~i~~~g~~~~~~~~~~ 88 (259)
T PRK14274 9 KQEVYQINGMNLWYGQHHALKNINLSIPENEVTAIIGPSGCGKSTFIKTLNLMIQMVPNVKLTGEMNYNGSNILKGKVDL 88 (259)
T ss_pred CCceEEEeeEEEEECCeeeEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceEEEECCEEccccccCH
Confidence 4557999999999998889999999999999999999999999999999999987 3 5999999887542
Q ss_pred ------eeeecccchhhcCCCccHHHHHHHHhccc---c----HHHHHHHHhhcCCCc---ccccccCCCCCHHHHHHHH
Q 005532 490 ------PNYFEQNQAEALDLDKTVLETVAEAAEDW---R----IDDIKGLLGRCNFKA---DMLDRKVSLLSGGEKARLA 553 (692)
Q Consensus 490 ------~~~~~q~~~~~l~~~~tv~e~~~~~~~~~---~----~~~~~~~L~~~~l~~---~~~~~~~~~LSgGqkqrv~ 553 (692)
.+|++|+. .+.+ .|+.+|+......+ . ...+..+++.+++.. +..++++.+||||||||++
T Consensus 89 ~~~~~~i~~v~q~~--~~~~-~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~l~~~~~~LS~Gq~qrv~ 165 (259)
T PRK14274 89 VELRKNIGMVFQKG--NPFP-QSIFDNVAYGPRIHGTKNKKKLQEIVEKSLKDVALWDEVKDRLHTQALSLSGGQQQRLC 165 (259)
T ss_pred HHHhhceEEEecCC--cccc-cCHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCchhhhhhhhCCcccCCHHHHHHHH
Confidence 34566543 3434 49999986542211 1 123567788888742 3467899999999999999
Q ss_pred HHHHhccCCcEEEEeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhccEEEEEECCEEEEecCChhHHHH
Q 005532 554 FCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY--KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYYLE 630 (692)
Q Consensus 554 LAral~~~p~lLlLDEPTn~LD~~~~~~l~~~l~~~--~~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~~~~~ 630 (692)
|||+|+.+|+||||||||++||+.++..+.+.|.++ +.|||+||||++++.++||++++|++|++.. .|+.+++..
T Consensus 166 laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~i~~-~g~~~~~~~ 243 (259)
T PRK14274 166 IARALATNPDVLLMDEPTSALDPVSTRKIEELILKLKEKYTIVIVTHNMQQAARVSDQTAFFYMGELVE-CNDTNKMFS 243 (259)
T ss_pred HHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhCCEEEEEECCEEEE-ECCHHHHhh
Confidence 999999999999999999999999999999999876 3599999999999999999999999999985 477666643
No 417
>cd03231 ABC_CcmA_heme_exporter CcmA, the ATP-binding component of the bacterial CcmAB transporter. The CCM family is involved in bacterial cytochrome c biogenesis. Cytochrome c maturation in E. coli requires the ccm operon, which encodes eight membrane proteins (CcmABCDEFGH). CcmE is a periplasmic heme chaperone that binds heme covalently and transfers it onto apocytochrome c in the presence of CcmF, CcmG, and CcmH. The CcmAB proteins represent an ABC transporter and the CcmCD proteins participate in heme transfer to CcmE.
Probab=100.00 E-value=2e-38 Score=317.36 Aligned_cols=186 Identities=28% Similarity=0.462 Sum_probs=163.0
Q ss_pred EEEEeEEEEcCCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccce---------eeeecc
Q 005532 425 VTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL---------PNYFEQ 495 (692)
Q Consensus 425 l~~~~l~~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~~---------~~~~~q 495 (692)
|+++||++.|+++.+|+++||+|++|+++||+|+||||||||+++|+|+++|++|+|.++|.++. .+|++|
T Consensus 1 l~i~~l~~~~~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~i~~~~q 80 (201)
T cd03231 1 LEADELTCERDGRALFSGLSFTLAAGEALQVTGPNGSGKTTLLRILAGLSPPLAGRVLLNGGPLDFQRDSIARGLLYLGH 80 (201)
T ss_pred CEEEEEEEEeCCceeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccccHHhhhheEEecc
Confidence 47899999999889999999999999999999999999999999999999999999999886642 245554
Q ss_pred cchhhcCCCccHHHHHHHHhccccHHHHHHHHhhcCCCcccccccCCCCCHHHHHHHHHHHHhccCCcEEEEeCCCCCCC
Q 005532 496 NQAEALDLDKTVLETVAEAAEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLD 575 (692)
Q Consensus 496 ~~~~~l~~~~tv~e~~~~~~~~~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~LAral~~~p~lLlLDEPTn~LD 575 (692)
+ ..+.+..|+.+|+...........+.++++.+++. ...++++.+||||||||++|||||+.+|++|||||||++||
T Consensus 81 ~--~~~~~~~tv~e~l~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LS~G~~qrl~laral~~~p~llllDEPt~~LD 157 (201)
T cd03231 81 A--PGIKTTLSVLENLRFWHADHSDEQVEEALARVGLN-GFEDRPVAQLSAGQQRRVALARLLLSGRPLWILDEPTTALD 157 (201)
T ss_pred c--cccCCCcCHHHHHHhhcccccHHHHHHHHHHcCCh-hhhcCchhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCC
Confidence 3 34556789999987654333445678899999995 45788999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhc---CceEEEEecCHHHHHhhccEEEEE
Q 005532 576 IPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEV 613 (692)
Q Consensus 576 ~~~~~~l~~~l~~~---~~tviivSHd~~~l~~~~d~i~~l 613 (692)
+.+++.+.+.|.++ +.|+|+||||...+..+|++++.+
T Consensus 158 ~~~~~~l~~~l~~~~~~g~tiii~sH~~~~~~~~~~~~~~~ 198 (201)
T cd03231 158 KAGVARFAEAMAGHCARGGMVVLTTHQDLGLSEAGARELDL 198 (201)
T ss_pred HHHHHHHHHHHHHHHhCCCEEEEEecCchhhhhccceeEec
Confidence 99999999999865 569999999999999999999877
No 418
>PRK14264 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.3e-38 Score=333.78 Aligned_cols=223 Identities=20% Similarity=0.305 Sum_probs=171.8
Q ss_pred CCCCcEEEEeEEEEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCC-----CCccEEEECCCC-------
Q 005532 93 SISSGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEE-----PDSGNVIKAKSN------- 160 (692)
Q Consensus 93 ~~~~~l~i~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~-----p~~G~I~~~~~~------- 160 (692)
+...+|.++|+++.|+++++|+++||+|++|++++|+|+||||||||+++|+|+++ |++|+|.++|.+
T Consensus 41 ~~~~~l~i~nl~~~~~~~~iL~~is~~i~~Ge~~~IvG~nGsGKSTLl~~L~Gl~~~~~~~p~~G~I~i~g~~i~~~~~~ 120 (305)
T PRK14264 41 DGDAKLSVEDLDVYYGDDHALKGVSMDIPEKSVTALIGPSGCGKSTFLRCLNRMNDRIKAARIDGSVELDGQDIYQDGVN 120 (305)
T ss_pred CCCceEEEEEEEEEeCCeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccc
Confidence 34457999999999998899999999999999999999999999999999999986 689999998632
Q ss_pred -----ceEEEEcccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcC-ccc
Q 005532 161 -----MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVN-LDT 234 (692)
Q Consensus 161 -----~~i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 234 (692)
..|+|++|++.++. .||++|+...+.... .... .....++ ... ...
T Consensus 121 ~~~~~~~i~~v~q~~~l~~-~tv~enl~~~~~~~~-----------~~~~-----~~~~~~~-----------~~~~~~~ 172 (305)
T PRK14264 121 LVELRKRVGMVFQSPNPFP-KSIRENISYGPRKHG-----------DINT-----GLLARLL-----------GRDDKDA 172 (305)
T ss_pred HHHHhhceEEEccCCcccc-ccHHHHHHhHHhhcc-----------cccc-----ccccccc-----------ccCchHH
Confidence 25999999987755 599999864321000 0000 0000000 000 011
Q ss_pred HHHHHHHHhhhcCCCc---cccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHccC--CCeE
Q 005532 235 LDAKVSKLMPELGFTA---DDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGKQ--DVPM 309 (692)
Q Consensus 235 ~~~~i~~ll~~lgl~~---~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~~--~~tv 309 (692)
...++.++++.+++.. ...++++.+|||||+|||+|||||+.+|+||||||||+|||+.++.++.++|++. +.||
T Consensus 173 ~~~~~~~~l~~~~l~~~~~~~~~~~~~~LSgGq~qrv~LAraL~~~p~lLLLDEPtsgLD~~~~~~l~~~L~~~~~~~ti 252 (305)
T PRK14264 173 EDELVERSLRQAALWDEVNDRLDDNALGLSGGQQQRLCIARCLAVDPEVILMDEPASALDPIATSKIEDLIEELAEEYTV 252 (305)
T ss_pred HHHHHHHHHHHcCCchhhhHHhcCccccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEE
Confidence 2345566777777631 3457788999999999999999999999999999999999999999998887542 5899
Q ss_pred EEEecCHHHHHhhcCeE-EEEecceEEEeccChHHH
Q 005532 310 VIISHDRAFLDQLCTKI-VETEMGVSRTYEGNYSQY 344 (692)
Q Consensus 310 I~vsHd~~~l~~~~d~i-~~l~~G~~~~~~G~y~~~ 344 (692)
|+|||+++++..+||++ +++++|++. ..|...++
T Consensus 253 iivtH~~~~i~~~~d~i~~~l~~G~i~-~~g~~~~~ 287 (305)
T PRK14264 253 VVVTHNMQQAARISDQTAVFLTGGELV-EYDDTDKI 287 (305)
T ss_pred EEEEcCHHHHHHhcCEEEEEecCCEEE-EeCCHHHH
Confidence 99999999999999997 567999984 45665443
No 419
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.3e-38 Score=328.25 Aligned_cols=193 Identities=25% Similarity=0.350 Sum_probs=163.2
Q ss_pred CCCceEEEEeEEEEcCCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCC-----CCeeEEEECCccce-----
Q 005532 420 SGRSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEK-----PRGGEVLLGEHNVL----- 489 (692)
Q Consensus 420 ~~~~~l~~~~l~~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~-----p~~G~i~~~~~~~~----- 489 (692)
++.++|+++||++.|+++.+|+++||+|++||++||+|+||||||||+++|+|+++ |++|+|.++|.++.
T Consensus 9 ~~~~~l~i~nl~~~~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~v~~~g~~i~~~~~~ 88 (269)
T PRK14259 9 SKNIIISLQNVTISYGTFEAVKNVFCDIPRGKVTALIGPSGCGKSTVLRSLNRMNDLIEGCSLKGRVLFDGTDLYDPRVD 88 (269)
T ss_pred CCCceEEEEeEEEEECCEEEEcceEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEcccccCC
Confidence 34467999999999998889999999999999999999999999999999999987 69999999886541
Q ss_pred -------eeeecccchhhcCCCccHHHHHHHHhccc-----cHHHHHHHHhhcCCC---cccccccCCCCCHHHHHHHHH
Q 005532 490 -------PNYFEQNQAEALDLDKTVLETVAEAAEDW-----RIDDIKGLLGRCNFK---ADMLDRKVSLLSGGEKARLAF 554 (692)
Q Consensus 490 -------~~~~~q~~~~~l~~~~tv~e~~~~~~~~~-----~~~~~~~~L~~~~l~---~~~~~~~~~~LSgGqkqrv~L 554 (692)
.+|++|+. .+.+ .|+.+|+....... ..+.+..+++.+++. ....++++.+|||||||||+|
T Consensus 89 ~~~~~~~i~~v~q~~--~l~~-~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LS~G~~qrl~l 165 (269)
T PRK14259 89 PVEVRRRIGMVFQQP--NPFP-KSIYENIAFGARINGYTGDMDELVERSLRKAAVWDECKDKLNESGYSLSGGQQQRLCI 165 (269)
T ss_pred HHHHhhceEEEccCC--ccch-hhHHHHHhhhhhhcCCcHHHHHHHHHHHHHhCCcchhhhhhCCCcccCCHHHHHHHHH
Confidence 35666653 3444 59999987543211 123456678887763 234688899999999999999
Q ss_pred HHHhccCCcEEEEeCCCCCCCHHHHHHHHHHHHhcC--ceEEEEecCHHHHHhhccEEEEEEC
Q 005532 555 CKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEYK--GTVITVSHDRYFVKQIVNRVVEVKG 615 (692)
Q Consensus 555 Aral~~~p~lLlLDEPTn~LD~~~~~~l~~~l~~~~--~tviivSHd~~~l~~~~d~i~~l~~ 615 (692)
||||+.+|+||||||||++||+.+++.+.++|.++. .|||+||||++++..+||++++|++
T Consensus 166 aral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~ 228 (269)
T PRK14259 166 ARTIAIEPEVILMDEPCSALDPISTLKIEETMHELKKNFTIVIVTHNMQQAVRVSDMTAFFNA 228 (269)
T ss_pred HHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEec
Confidence 999999999999999999999999999999998763 5999999999999999999999996
No 420
>PLN03073 ABC transporter F family; Provisional
Probab=100.00 E-value=4.9e-38 Score=366.18 Aligned_cols=219 Identities=25% Similarity=0.434 Sum_probs=172.3
Q ss_pred CCceEEEEeEEEEcCCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCC---CCCeeEEEECCccc-----ee--
Q 005532 421 GRSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLE---KPRGGEVLLGEHNV-----LP-- 490 (692)
Q Consensus 421 ~~~~l~~~~l~~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~---~p~~G~i~~~~~~~-----~~-- 490 (692)
...+|+++|++++|+++.+|+|+||+|.+|+++||||+|||||||||++|+|.. .|++|+|.+.++.+ ..
T Consensus 174 ~~~~I~i~nls~~y~~~~ll~~isl~i~~Ge~~gLvG~NGsGKSTLLr~l~g~~~~g~p~~g~I~~~~Q~~~g~~~t~~~ 253 (718)
T PLN03073 174 AIKDIHMENFSISVGGRDLIVDASVTLAFGRHYGLVGRNGTGKTTFLRYMAMHAIDGIPKNCQILHVEQEVVGDDTTALQ 253 (718)
T ss_pred CceeEEEceEEEEeCCCEEEECCEEEECCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCCCCEEEEEeccCCCCCCCHHH
Confidence 445799999999999888999999999999999999999999999999999964 57889987533221 00
Q ss_pred -----------------eeecccchhhcC--------------CCccHHHHHHHH------hcccc-HHHHHHHHhhcCC
Q 005532 491 -----------------NYFEQNQAEALD--------------LDKTVLETVAEA------AEDWR-IDDIKGLLGRCNF 532 (692)
Q Consensus 491 -----------------~~~~q~~~~~l~--------------~~~tv~e~~~~~------~~~~~-~~~~~~~L~~~~l 532 (692)
+++.|....... +...+.+.+... .+.|. ..++..+|..+||
T Consensus 254 ~v~~~~~~~~~~~~~~~~~~~q~~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~r~~~~L~~lgl 333 (718)
T PLN03073 254 CVLNTDIERTQLLEEEAQLVAQQRELEFETETGKGKGANKDGVDKDAVSQRLEEIYKRLELIDAYTAEARAASILAGLSF 333 (718)
T ss_pred HHHHhhHHHHHHHHHHHHHHHHHHHhhhcccccccccccccccchHHHHHHHHHHHHHHHhcCcchHHHHHHHHHHHCCC
Confidence 111111000000 000011111110 11222 2457789999999
Q ss_pred CcccccccCCCCCHHHHHHHHHHHHhccCCcEEEEeCCCCCCCHHHHHHHHHHHHhcCceEEEEecCHHHHHhhccEEEE
Q 005532 533 KADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEYKGTVITVSHDRYFVKQIVNRVVE 612 (692)
Q Consensus 533 ~~~~~~~~~~~LSgGqkqrv~LAral~~~p~lLlLDEPTn~LD~~~~~~l~~~l~~~~~tviivSHd~~~l~~~~d~i~~ 612 (692)
.....++++.+|||||||||+||++|+.+|+||||||||||||+.++.+|.++|+++++|||+||||++++..+||+|++
T Consensus 334 ~~~~~~~~~~~LSgG~k~rv~LA~aL~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~~~tviivsHd~~~l~~~~d~i~~ 413 (718)
T PLN03073 334 TPEMQVKATKTFSGGWRMRIALARALFIEPDLLLLDEPTNHLDLHAVLWLETYLLKWPKTFIVVSHAREFLNTVVTDILH 413 (718)
T ss_pred ChHHHhCchhhCCHHHHHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHcCCEEEEEECCHHHHHHhCCEEEE
Confidence 75667899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EECCEEEEecCChhHHHHHhHHHHHHH
Q 005532 613 VKGSNLQDYAGDYNYYLEKNLDAREKE 639 (692)
Q Consensus 613 l~~g~l~~~~g~~~~~~~~~~~~~~~~ 639 (692)
|++|++..|.|+|+.|...+.++...+
T Consensus 414 l~~g~i~~~~g~~~~~~~~~~~~~~~~ 440 (718)
T PLN03073 414 LHGQKLVTYKGDYDTFERTREEQLKNQ 440 (718)
T ss_pred EECCEEEEeCCCHHHHHHHHHHHHHHH
Confidence 999999999999999988766544433
No 421
>PRK14251 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.2e-38 Score=325.82 Aligned_cols=202 Identities=25% Similarity=0.375 Sum_probs=169.4
Q ss_pred ceEEEEeEEEEcCCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCC-----CCeeEEEECCccce--------
Q 005532 423 SVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEK-----PRGGEVLLGEHNVL-------- 489 (692)
Q Consensus 423 ~~l~~~~l~~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~-----p~~G~i~~~~~~~~-------- 489 (692)
++|+++|++++|+++++|+++||+|++||++||+|+||||||||+++|+|+++ |++|+|.++|.++.
T Consensus 3 ~~l~~~~l~~~~~~~~~l~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~v~i~g~~~~~~~~~~~~ 82 (251)
T PRK14251 3 NIISAKDVHLSYGNYEALHGISLDFEEKELTALIGPSGCGKSTFLRCLNRMNDDIENIKITGEIKFEGQNIYGSKMDLVE 82 (251)
T ss_pred ceEEEEeeEEEECCeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhhccccccCCCcceEEEECCEEcccccchHHH
Confidence 36899999999998899999999999999999999999999999999999997 47999999886541
Q ss_pred ----eeeecccchhhcCCCccHHHHHHHHhcc---cc----HHHHHHHHhhcCCC---cccccccCCCCCHHHHHHHHHH
Q 005532 490 ----PNYFEQNQAEALDLDKTVLETVAEAAED---WR----IDDIKGLLGRCNFK---ADMLDRKVSLLSGGEKARLAFC 555 (692)
Q Consensus 490 ----~~~~~q~~~~~l~~~~tv~e~~~~~~~~---~~----~~~~~~~L~~~~l~---~~~~~~~~~~LSgGqkqrv~LA 555 (692)
.+|+.|+. .+. ..|+.+|+...... .. ...+..+++.+++. ....++++.+||||||||++||
T Consensus 83 ~~~~i~~~~q~~--~~~-~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~Gq~qr~~la 159 (251)
T PRK14251 83 LRKEVGMVFQQP--TPF-PFSVYDNVAYGLKIAGVKDKELIDQRVEESLKQAAIWKETKDNLDRNAQAFSGGQQQRICIA 159 (251)
T ss_pred hhccEEEEecCC--ccC-CCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCCcchHHHhccChhhCCHHHHHHHHHH
Confidence 24555543 343 47999998754211 11 13466788888883 1345788999999999999999
Q ss_pred HHhccCCcEEEEeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhccEEEEEECCEEEEecCChhHH
Q 005532 556 KFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY--KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYY 628 (692)
Q Consensus 556 ral~~~p~lLlLDEPTn~LD~~~~~~l~~~l~~~--~~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~~~ 628 (692)
|||+.+|+||||||||++||+.+++.+.+.|.++ +.|||+||||++++..+||+|++|++|++... |..+++
T Consensus 160 ral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~-~~~~~~ 233 (251)
T PRK14251 160 RALAVRPKVVLLDEPTSALDPISSSEIEETLMELKHQYTFIMVTHNLQQAGRISDQTAFLMNGDLIEA-GPTEEM 233 (251)
T ss_pred HHHhcCCCEEEecCCCccCCHHHHHHHHHHHHHHHcCCeEEEEECCHHHHHhhcCEEEEEECCEEEEe-CCHHHH
Confidence 9999999999999999999999999999999876 46999999999999999999999999999864 555444
No 422
>PRK14255 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.5e-38 Score=325.16 Aligned_cols=204 Identities=25% Similarity=0.360 Sum_probs=168.9
Q ss_pred CceEEEEeEEEEcCCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCC--C---CeeEEEECCccce-------
Q 005532 422 RSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEK--P---RGGEVLLGEHNVL------- 489 (692)
Q Consensus 422 ~~~l~~~~l~~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~--p---~~G~i~~~~~~~~------- 489 (692)
+++|+++||++.|+++.+|+++||+|.+||++||+|+||||||||+++|+|+.+ | ++|+|.++|.++.
T Consensus 3 ~~~l~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~ 82 (252)
T PRK14255 3 KKIITSSDVHLFYGKFEALKGIDLDFNQNEITALIGPSGCGKSTYLRTLNRMNDLIPGVTITGNVSLRGQNIYAPNEDVV 82 (252)
T ss_pred cceEEEEeEEEEECCeeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcccEEEEcCEEcccccccHH
Confidence 457999999999998889999999999999999999999999999999999875 5 5999999886541
Q ss_pred -----eeeecccchhhcCCCccHHHHHHHHhcc---cc----HHHHHHHHhhcCCC---cccccccCCCCCHHHHHHHHH
Q 005532 490 -----PNYFEQNQAEALDLDKTVLETVAEAAED---WR----IDDIKGLLGRCNFK---ADMLDRKVSLLSGGEKARLAF 554 (692)
Q Consensus 490 -----~~~~~q~~~~~l~~~~tv~e~~~~~~~~---~~----~~~~~~~L~~~~l~---~~~~~~~~~~LSgGqkqrv~L 554 (692)
.+|+.|+. .+.+ .|+.+|+...... .. ...+...++.+++. ....++++.+|||||||||+|
T Consensus 83 ~~~~~i~~~~q~~--~~~~-~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~~~~~~~~~~LS~Gq~qrv~l 159 (252)
T PRK14255 83 QLRKQVGMVFQQP--NPFP-FSIYENVIYGLRLAGVKDKAVLDEAVETSLKQAAIWDEVKDHLHESALSLSGGQQQRVCI 159 (252)
T ss_pred HhcCeEEEEECCC--ccCC-CcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCccchhhHHhcCcccCCHHHHHHHHH
Confidence 34566543 3444 6999998754211 11 12355667777663 234678899999999999999
Q ss_pred HHHhccCCcEEEEeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhccEEEEEECCEEEEecCChhHH
Q 005532 555 CKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY--KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYY 628 (692)
Q Consensus 555 Aral~~~p~lLlLDEPTn~LD~~~~~~l~~~l~~~--~~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~~~ 628 (692)
||+|+.+|+||||||||++||+.++.++.+.|+++ +.|||+||||++++..+||+|++|++|++..+...++.|
T Consensus 160 aral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 235 (252)
T PRK14255 160 ARVLAVKPDVILLDEPTSALDPISSTQIENMLLELRDQYTIILVTHSMHQASRISDKTAFFLTGNLIEFADTKQMF 235 (252)
T ss_pred HHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHhCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHh
Confidence 99999999999999999999999999999999876 369999999999999999999999999998765444444
No 423
>PRK14272 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.3e-38 Score=324.66 Aligned_cols=203 Identities=24% Similarity=0.392 Sum_probs=168.9
Q ss_pred eEEEEeEEEEcCCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCC-----eeEEEECCccce---------
Q 005532 424 VVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPR-----GGEVLLGEHNVL--------- 489 (692)
Q Consensus 424 ~l~~~~l~~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~-----~G~i~~~~~~~~--------- 489 (692)
+|+++|+++.|+++++|+++||+|++||++||+|+||||||||+++|+|+++|+ +|+|.++|.++.
T Consensus 4 ~l~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~ 83 (252)
T PRK14272 4 LLSAQDVNIYYGDKQAVKNVNLDVQRGTVNALIGPSGCGKTTFLRAINRMHDLTPGARVTGRILLDGQDIYGPRVDPVAM 83 (252)
T ss_pred EEEEeeeEEEECCEEeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceeEEECCEEcccCccCHHHh
Confidence 689999999999889999999999999999999999999999999999999874 899999886542
Q ss_pred ---eeeecccchhhcCCCccHHHHHHHHhcc--c-cH----HHHHHHHhhcCCC---cccccccCCCCCHHHHHHHHHHH
Q 005532 490 ---PNYFEQNQAEALDLDKTVLETVAEAAED--W-RI----DDIKGLLGRCNFK---ADMLDRKVSLLSGGEKARLAFCK 556 (692)
Q Consensus 490 ---~~~~~q~~~~~l~~~~tv~e~~~~~~~~--~-~~----~~~~~~L~~~~l~---~~~~~~~~~~LSgGqkqrv~LAr 556 (692)
.+|++|+ ..+.+..|+.+|+...... . .. +.+..++..+++. ....++++.+||||||||++|||
T Consensus 84 ~~~i~~~~q~--~~~~~~~t~~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LS~G~~qrv~lar 161 (252)
T PRK14272 84 RRRVGMVFQK--PNPFPTMSVFDNVVAGLKLAGIRDRDHLMEVAERSLRGAALWDEVKDRLKTPATGLSGGQQQRLCIAR 161 (252)
T ss_pred hceeEEEecc--CccCcCCCHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCcchhhhhhhcCCcccCCHHHHHHHHHHH
Confidence 3455654 3456678999999754221 1 11 2344556666542 13457889999999999999999
Q ss_pred HhccCCcEEEEeCCCCCCCHHHHHHHHHHHHhcC--ceEEEEecCHHHHHhhccEEEEEECCEEEEecCChhHHH
Q 005532 557 FMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEYK--GTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYYL 629 (692)
Q Consensus 557 al~~~p~lLlLDEPTn~LD~~~~~~l~~~l~~~~--~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~~~~ 629 (692)
+|+.+|+||||||||++||+.+++.+.+.|+++. .|||+||||++++..+||+|++|++|++.. .|..+++.
T Consensus 162 al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~-~~~~~~~~ 235 (252)
T PRK14272 162 ALAVEPEILLMDEPTSALDPASTARIEDLMTDLKKVTTIIIVTHNMHQAARVSDTTSFFLVGDLVE-HGPTDQLF 235 (252)
T ss_pred HHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEE-eCCHHHHH
Confidence 9999999999999999999999999999998764 699999999999999999999999999984 46655553
No 424
>cd03220 ABC_KpsT_Wzt ABC_KpsT_Wzt The KpsT/Wzt ABC transporter subfamily is involved in extracellular polysaccharide export. Among the variety of membrane-linked or extracellular polysaccharides excreted by bacteria, only capsular polysaccharides, lipopolysaccharides, and teichoic acids have been shown to be exported by ABC transporters. A typical system is made of a conserved integral membrane and an ABC. In addition to these proteins, capsular polysaccharide exporter systems require two 'accessory' proteins to perform their function: a periplasmic (E.coli) or a lipid-anchored outer membrane protein called OMA (Neisseria meningitidis and Haemophilus influenzae) and a cytoplasmic membrane protein MPA2.
Probab=100.00 E-value=1.4e-38 Score=323.80 Aligned_cols=191 Identities=25% Similarity=0.332 Sum_probs=164.5
Q ss_pred EEEEeEEEEcCCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccceeeeecccchhhcCCC
Q 005532 425 VTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQNQAEALDLD 504 (692)
Q Consensus 425 l~~~~l~~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~~~~~~~q~~~~~l~~~ 504 (692)
+.+++++++|+++++|+++||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|.++. ... ....+.+.
T Consensus 23 l~~~~~~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~--~~~--~~~~~~~~ 98 (224)
T cd03220 23 LGILGRKGEVGEFWALKDVSFEVPRGERIGLIGRNGAGKSTLLRLLAGIYPPDSGTVTVRGRVSS--LLG--LGGGFNPE 98 (224)
T ss_pred hhhhhhhhhcCCeEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEch--hhc--ccccCCCC
Confidence 78999999999999999999999999999999999999999999999999999999999986532 111 11234567
Q ss_pred ccHHHHHHHHhccc--c----HHHHHHHHhhcCCCcccccccCCCCCHHHHHHHHHHHHhccCCcEEEEeCCCCCCCHHH
Q 005532 505 KTVLETVAEAAEDW--R----IDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPS 578 (692)
Q Consensus 505 ~tv~e~~~~~~~~~--~----~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~LAral~~~p~lLlLDEPTn~LD~~~ 578 (692)
.|+.+|+......+ . ...+..+++.+++. +..++++.+|||||||||+|||+|+.+|++|||||||++||+.+
T Consensus 99 ~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LSgG~~qrv~laral~~~p~llllDEP~~gLD~~~ 177 (224)
T cd03220 99 LTGRENIYLNGRLLGLSRKEIDEKIDEIIEFSELG-DFIDLPVKTYSSGMKARLAFAIATALEPDILLIDEVLAVGDAAF 177 (224)
T ss_pred CcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCh-hhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHH
Confidence 89999987542211 1 12466788888985 56789999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhc---CceEEEEecCHHHHHhhccEEEEEECCEEEE
Q 005532 579 KEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKGSNLQD 620 (692)
Q Consensus 579 ~~~l~~~l~~~---~~tviivSHd~~~l~~~~d~i~~l~~g~l~~ 620 (692)
+..+.+.|.++ +.|||+||||.+++..+||++++|++|++..
T Consensus 178 ~~~~~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~ 222 (224)
T cd03220 178 QEKCQRRLRELLKQGKTVILVSHDPSSIKRLCDRALVLEKGKIRF 222 (224)
T ss_pred HHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEe
Confidence 99999998765 4699999999999999999999999999864
No 425
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=6.1e-38 Score=362.82 Aligned_cols=209 Identities=27% Similarity=0.424 Sum_probs=165.1
Q ss_pred cEEEEeEEEEe-CCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCCc----------eEEE
Q 005532 97 GVKLENISKSY-KGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSNM----------KIAF 165 (692)
Q Consensus 97 ~l~i~~ls~~y-~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~~----------~i~~ 165 (692)
.|+++||+|.| +++++|+|+||+|++|+++||||+||||||||+++|+|++ |++|+|.++|.+. .|+|
T Consensus 349 ~i~~~~vsf~~~~~~~vL~~i~l~i~~G~~vaIvG~SGsGKSTL~~lL~g~~-p~~G~I~i~g~~i~~~~~~~lr~~i~~ 427 (588)
T PRK11174 349 TIEAEDLEILSPDGKTLAGPLNFTLPAGQRIALVGPSGAGKTSLLNALLGFL-PYQGSLKINGIELRELDPESWRKHLSW 427 (588)
T ss_pred eEEEEeeEEeccCCCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCC-CCCcEEEECCEecccCCHHHHHhheEE
Confidence 49999999766 4567999999999999999999999999999999999999 9999999998532 5999
Q ss_pred EcccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHHhhh
Q 005532 166 LSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPE 245 (692)
Q Consensus 166 v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~ 245 (692)
|+|+|++ ++.||+|||..+-.+ .. -+++.++++.+. +. +.+..
T Consensus 428 v~Q~~~L-F~~TI~eNI~~g~~~-~~----~eei~~al~~a~---------------------------l~----~~i~~ 470 (588)
T PRK11174 428 VGQNPQL-PHGTLRDNVLLGNPD-AS----DEQLQQALENAW---------------------------VS----EFLPL 470 (588)
T ss_pred ecCCCcC-CCcCHHHHhhcCCCC-CC----HHHHHHHHHHhC---------------------------HH----HHHHh
Confidence 9999988 678999999743110 00 012222222111 11 12222
Q ss_pred c--CCCccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc--CCCeEEEEecCHHHHHh
Q 005532 246 L--GFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVIISHDRAFLDQ 321 (692)
Q Consensus 246 l--gl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~--~~~tvI~vsHd~~~l~~ 321 (692)
+ |+.+..+++ ..+||||||||++|||||+++|+|||||||||+||+++.+.+.+.|.+ .++|+|+|||+++.+..
T Consensus 471 lp~G~dT~vge~-G~~LSGGQrQRialARAll~~~~IliLDE~TSaLD~~te~~i~~~l~~~~~~~TvIiItHrl~~i~~ 549 (588)
T PRK11174 471 LPQGLDTPIGDQ-AAGLSVGQAQRLALARALLQPCQLLLLDEPTASLDAHSEQLVMQALNAASRRQTTLMVTHQLEDLAQ 549 (588)
T ss_pred cccccccccccC-CCCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHhCCCEEEEEecChHHHHh
Confidence 2 444433333 678999999999999999999999999999999999999999887754 47999999999998865
Q ss_pred hcCeEEEEecceEEEeccChHHHHH
Q 005532 322 LCTKIVETEMGVSRTYEGNYSQYVL 346 (692)
Q Consensus 322 ~~d~i~~l~~G~~~~~~G~y~~~~~ 346 (692)
||+|+++++|++ .-.|++++.+.
T Consensus 550 -aD~Iivl~~G~i-~e~G~~~eL~~ 572 (588)
T PRK11174 550 -WDQIWVMQDGQI-VQQGDYAELSQ 572 (588)
T ss_pred -CCEEEEEeCCeE-eecCCHHHHHh
Confidence 999999999998 46788765543
No 426
>PRK13547 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=4.4e-38 Score=328.78 Aligned_cols=201 Identities=26% Similarity=0.363 Sum_probs=170.7
Q ss_pred eEEEEeEEEEcCCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCC--------eeEEEECCccce------
Q 005532 424 VVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPR--------GGEVLLGEHNVL------ 489 (692)
Q Consensus 424 ~l~~~~l~~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~--------~G~i~~~~~~~~------ 489 (692)
+|+++|++++|+++.+|+++||+|++|+++||+||||||||||+++|+|+++|+ +|+|.++|.++.
T Consensus 1 ml~~~nl~~~~~~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~laG~~~p~~~~~~~~~~G~i~~~g~~~~~~~~~~ 80 (272)
T PRK13547 1 MLTADHLHVARRHRAILRDLSLRIEPGRVTALLGRNGAGKSTLLKALAGDLTGGGAPRGARVTGDVTLNGEPLAAIDAPR 80 (272)
T ss_pred CeEEEEEEEEECCEeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCcccccccCCceEEEECCEEcccCCHHH
Confidence 488999999999889999999999999999999999999999999999999998 999999986542
Q ss_pred ----eeeecccchhhcCCCccHHHHHHHHhc-------cc---cHHHHHHHHhhcCCCcccccccCCCCCHHHHHHHHHH
Q 005532 490 ----PNYFEQNQAEALDLDKTVLETVAEAAE-------DW---RIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFC 555 (692)
Q Consensus 490 ----~~~~~q~~~~~l~~~~tv~e~~~~~~~-------~~---~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~LA 555 (692)
.+|++|.. .+.+..|+.+|+..... .+ ....+..+++.+++. ...++++.+|||||||||+||
T Consensus 81 ~~~~~~~v~q~~--~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LSgG~~qrv~la 157 (272)
T PRK13547 81 LARLRAVLPQAA--QPAFAFSAREIVLLGRYPHARRAGALTHRDGEIAWQALALAGAT-ALVGRDVTTLSGGELARVQFA 157 (272)
T ss_pred HHhhcEEecccC--CCCCCCcHHHHHhhcccccccccccCCHHHHHHHHHHHHHcCcH-hhhcCCcccCCHHHHHHHHHH
Confidence 24556543 23346899999865321 01 123467889999995 567899999999999999999
Q ss_pred HHhc---------cCCcEEEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEECCEEEEec
Q 005532 556 KFMV---------KPSTLLVLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYA 622 (692)
Q Consensus 556 ral~---------~~p~lLlLDEPTn~LD~~~~~~l~~~l~~~----~~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~ 622 (692)
|||+ .+|++|||||||++||+.+++.+.+.|+++ +.|||+||||++++.++||++++|++|++.. .
T Consensus 158 ral~~~~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tviiisH~~~~~~~~~d~i~~l~~G~i~~-~ 236 (272)
T PRK13547 158 RVLAQLWPPHDAAQPPRYLLLDEPTAALDLAHQHRLLDTVRRLARDWNLGVLAIVHDPNLAARHADRIAMLADGAIVA-H 236 (272)
T ss_pred HHHhccccccccCCCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCeEEE-e
Confidence 9999 599999999999999999999999998764 4699999999999999999999999999974 4
Q ss_pred CChhHH
Q 005532 623 GDYNYY 628 (692)
Q Consensus 623 g~~~~~ 628 (692)
|+.++.
T Consensus 237 g~~~~~ 242 (272)
T PRK13547 237 GAPADV 242 (272)
T ss_pred cCHHHH
Confidence 665544
No 427
>PRK09700 D-allose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.4e-38 Score=359.95 Aligned_cols=204 Identities=24% Similarity=0.329 Sum_probs=176.6
Q ss_pred ceEEEEeEEEEcCCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccce-----------ee
Q 005532 423 SVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL-----------PN 491 (692)
Q Consensus 423 ~~l~~~~l~~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~~-----------~~ 491 (692)
++|+++|++++|+++.+|+++||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++. .+
T Consensus 4 ~~l~~~~l~~~~~~~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~i~ 83 (510)
T PRK09700 4 PYISMAGIGKSFGPVHALKSVNLTVYPGEIHALLGENGAGKSTLMKVLSGIHEPTKGTITINNINYNKLDHKLAAQLGIG 83 (510)
T ss_pred ceEEEeeeEEEcCCeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCcCCCccEEEECCEECCCCCHHHHHHCCeE
Confidence 5799999999999888999999999999999999999999999999999999999999999886541 35
Q ss_pred eecccchhhcCCCccHHHHHHHHhc------c-----c--cHHHHHHHHhhcCCCcccccccCCCCCHHHHHHHHHHHHh
Q 005532 492 YFEQNQAEALDLDKTVLETVAEAAE------D-----W--RIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFM 558 (692)
Q Consensus 492 ~~~q~~~~~l~~~~tv~e~~~~~~~------~-----~--~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~LAral 558 (692)
|++|+. .+.+..|+.+|+..... . + ....+.++++.+|+. ...++++.+|||||||||+|||||
T Consensus 84 ~v~q~~--~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~-~~~~~~~~~LSgG~~qrv~ia~al 160 (510)
T PRK09700 84 IIYQEL--SVIDELTVLENLYIGRHLTKKVCGVNIIDWREMRVRAAMMLLRVGLK-VDLDEKVANLSISHKQMLEIAKTL 160 (510)
T ss_pred EEeecc--cccCCCcHHHHhhhccccccccccccccCHHHHHHHHHHHHHHcCCC-CCcccchhhCCHHHHHHHHHHHHH
Confidence 666643 45667899999875321 0 0 123467899999995 567999999999999999999999
Q ss_pred ccCCcEEEEeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhccEEEEEECCEEEEecCChhHHHH
Q 005532 559 VKPSTLLVLDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYYLE 630 (692)
Q Consensus 559 ~~~p~lLlLDEPTn~LD~~~~~~l~~~l~~~---~~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~~~~~ 630 (692)
+.+|+||||||||+|||+.++.++.+.|+++ +.|||+||||++++..+||+|++|++|++. +.|+++++..
T Consensus 161 ~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsHd~~~~~~~~d~v~~l~~G~i~-~~g~~~~~~~ 234 (510)
T PRK09700 161 MLDAKVIIMDEPTSSLTNKEVDYLFLIMNQLRKEGTAIVYISHKLAEIRRICDRYTVMKDGSSV-CSGMVSDVSN 234 (510)
T ss_pred hcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEe-eecchhhCCH
Confidence 9999999999999999999999999998765 469999999999999999999999999996 5688777643
No 428
>PRK14270 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6e-38 Score=324.68 Aligned_cols=203 Identities=25% Similarity=0.349 Sum_probs=171.1
Q ss_pred CceEEEEeEEEEcCCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCC-----CeeEEEECCccce-------
Q 005532 422 RSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKP-----RGGEVLLGEHNVL------- 489 (692)
Q Consensus 422 ~~~l~~~~l~~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p-----~~G~i~~~~~~~~------- 489 (692)
+++|+++|+++.|+++.+|+++||+|++||+++|+|+||||||||+++|+|+.+| ++|+|.++|.++.
T Consensus 2 ~~~l~~~~l~~~~~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 81 (251)
T PRK14270 2 KIKMESKNLNLWYGEKQALNDINLPIYENKITALIGPSGCGKSTFLRCLNRMNDLISNVKIEGEVLLDGKNIYDKDVDVV 81 (251)
T ss_pred ccEEEEEEeEEEECCeeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHHhccCcccCCCCccEEEECCEecccccccHH
Confidence 3579999999999988899999999999999999999999999999999999875 7999999886642
Q ss_pred -----eeeecccchhhcCCCccHHHHHHHHhcc---cc----HHHHHHHHhhcCCCc---ccccccCCCCCHHHHHHHHH
Q 005532 490 -----PNYFEQNQAEALDLDKTVLETVAEAAED---WR----IDDIKGLLGRCNFKA---DMLDRKVSLLSGGEKARLAF 554 (692)
Q Consensus 490 -----~~~~~q~~~~~l~~~~tv~e~~~~~~~~---~~----~~~~~~~L~~~~l~~---~~~~~~~~~LSgGqkqrv~L 554 (692)
.+|++|+. .+.+ .|+.+|+...... .. ...+..+++.+++.. ...++++.+|||||||||+|
T Consensus 82 ~~~~~i~~~~q~~--~~~~-~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~G~~qrv~l 158 (251)
T PRK14270 82 ELRKRVGMVFQKP--NPFP-MSIYDNVAYGPRIHGIKDKKELDKIVEWALKKAALWDEVKDDLKKSALKLSGGQQQRLCI 158 (251)
T ss_pred HHHhheEEEecCC--CcCC-CcHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHcCCchhhhhHhhCCcccCCHHHHHHHHH
Confidence 34666653 3444 8999998753211 11 124567888888732 34678899999999999999
Q ss_pred HHHhccCCcEEEEeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhccEEEEEECCEEEEecCChhHH
Q 005532 555 CKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY--KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYY 628 (692)
Q Consensus 555 Aral~~~p~lLlLDEPTn~LD~~~~~~l~~~l~~~--~~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~~~ 628 (692)
||+|+.+|+||||||||++||+.++..+.+.|+++ +.|||+||||++++..+||++++|++|++..+ |+.++.
T Consensus 159 aral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~~~tiiivsH~~~~~~~~~d~v~~l~~G~i~~~-~~~~~~ 233 (251)
T PRK14270 159 ARTIAVKPDVILMDEPTSALDPISTLKIEDLMVELKKEYTIVIVTHNMQQASRVSDYTAFFLMGDLIEF-NKTEKI 233 (251)
T ss_pred HHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCeEEEEEcCHHHHHHhcCEEEEEECCeEEEe-CCHHHH
Confidence 99999999999999999999999999999999876 36999999999999999999999999999854 555544
No 429
>PRK14275 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.5e-38 Score=329.77 Aligned_cols=205 Identities=24% Similarity=0.351 Sum_probs=171.0
Q ss_pred CCCceEEEEeEEEEcCCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCC-----CCeeEEEECCccce-----
Q 005532 420 SGRSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEK-----PRGGEVLLGEHNVL----- 489 (692)
Q Consensus 420 ~~~~~l~~~~l~~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~-----p~~G~i~~~~~~~~----- 489 (692)
.++++|+++||++.|+++.+|+|+||+|.+|++++|+|+||||||||+++|+|+.+ |++|+|.++|.++.
T Consensus 35 ~~~~~l~~~~l~~~~~~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~~~p~~~~~G~I~~~g~~i~~~~~~ 114 (286)
T PRK14275 35 GGKPHVVAKNFSIYYGEFEAVKKVNADILSKYVTAIIGPSGCGKSTFLRAINRMNDLIPSCHTTGALMFDGEDIYGKFTD 114 (286)
T ss_pred CCceEEEEeeeEEEECCEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCCceEEEECCEEhhhcccc
Confidence 36678999999999988889999999999999999999999999999999999864 49999999886531
Q ss_pred -------eeeecccchhhcCCCccHHHHHHHHhcc---cc----HHHHHHHHhhcCCC---cccccccCCCCCHHHHHHH
Q 005532 490 -------PNYFEQNQAEALDLDKTVLETVAEAAED---WR----IDDIKGLLGRCNFK---ADMLDRKVSLLSGGEKARL 552 (692)
Q Consensus 490 -------~~~~~q~~~~~l~~~~tv~e~~~~~~~~---~~----~~~~~~~L~~~~l~---~~~~~~~~~~LSgGqkqrv 552 (692)
.+|++|+. .+.+ .|+.+|+...... .. ...+..+++.+++. .+..++++.+|||||||||
T Consensus 115 ~~~~~~~i~~v~q~~--~l~~-~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LSgGq~qrv 191 (286)
T PRK14275 115 EVLLRKKIGMVFQKP--NPFP-KSIFDNIAYGPRLHGINDKKQLEEIVEKSLRKAALWDEVSDRLDKNALGLSGGQQQRL 191 (286)
T ss_pred hHHhhhcEEEECCCC--CCCc-cCHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHhCCccchhhHhhCChhhCCHHHHHHH
Confidence 34566653 3444 5999999754211 11 12456778888763 2356788999999999999
Q ss_pred HHHHHhccCCcEEEEeCCCCCCCHHHHHHHHHHHHhcC--ceEEEEecCHHHHHhhccEEEEEECCEEEEecCChhHH
Q 005532 553 AFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEYK--GTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYY 628 (692)
Q Consensus 553 ~LAral~~~p~lLlLDEPTn~LD~~~~~~l~~~l~~~~--~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~~~ 628 (692)
+|||||+.+|+||||||||++||+.+++.+.+.|+++. .|||+||||.+++..+||++++|++|++.. .|..++.
T Consensus 192 ~LAraL~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~~~tvIivsH~~~~~~~~~d~i~~L~~G~i~~-~g~~~~~ 268 (286)
T PRK14275 192 CVARTLAVEPEILLLDEPTSALDPKATAKIEDLIQELRGSYTIMIVTHNMQQASRVSDYTMFFYEGVLVE-HAPTAQL 268 (286)
T ss_pred HHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEE-eCCHHHH
Confidence 99999999999999999999999999999999998763 499999999999999999999999999985 4665554
No 430
>PRK14240 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.2e-38 Score=323.87 Aligned_cols=202 Identities=27% Similarity=0.405 Sum_probs=168.9
Q ss_pred eEEEEeEEEEcCCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCC-----CeeEEEECCccce---------
Q 005532 424 VVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKP-----RGGEVLLGEHNVL--------- 489 (692)
Q Consensus 424 ~l~~~~l~~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p-----~~G~i~~~~~~~~--------- 489 (692)
.|+++||++.|+++++|+|+||+|++||++||+|+||||||||+++|+|+++| ++|+|.++|.++.
T Consensus 3 ~l~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~ 82 (250)
T PRK14240 3 KISVKDLDLFYGDFQALKKINLDIEENQVTALIGPSGCGKSTFLRTLNRMNDLIPSVKIEGEVLLDGQDIYKSDIDVNQL 82 (250)
T ss_pred eEEEEEEEEEECCceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccchHHH
Confidence 58999999999888899999999999999999999999999999999999763 6999999986542
Q ss_pred ---eeeecccchhhcCCCccHHHHHHHHhccc-------cHHHHHHHHhhcCCCc---ccccccCCCCCHHHHHHHHHHH
Q 005532 490 ---PNYFEQNQAEALDLDKTVLETVAEAAEDW-------RIDDIKGLLGRCNFKA---DMLDRKVSLLSGGEKARLAFCK 556 (692)
Q Consensus 490 ---~~~~~q~~~~~l~~~~tv~e~~~~~~~~~-------~~~~~~~~L~~~~l~~---~~~~~~~~~LSgGqkqrv~LAr 556 (692)
.+|++|+. .+.+ .|+.+|+......+ ..+.+.++++.+++.. ...++++.+|||||||||+|||
T Consensus 83 ~~~i~~~~q~~--~~~~-~t~~~ni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LS~G~~qrv~lar 159 (250)
T PRK14240 83 RKRVGMVFQQP--NPFP-MSIYDNVAYGPRTHGIKDKKKLDEIVEKSLKGAALWDEVKDRLKKSALGLSGGQQQRLCIAR 159 (250)
T ss_pred hccEEEEecCC--ccCc-ccHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCchhhHHHHhcCCCCCCHHHHHHHHHHH
Confidence 34566543 3444 79999987542211 1234667788887632 3457889999999999999999
Q ss_pred HhccCCcEEEEeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhccEEEEEECCEEEEecCChhHHH
Q 005532 557 FMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY--KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYYL 629 (692)
Q Consensus 557 al~~~p~lLlLDEPTn~LD~~~~~~l~~~l~~~--~~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~~~~ 629 (692)
+|+.+|++|||||||++||+.++..+.+.|+++ +.|||+||||++++..+||++++|++|++... |+.+++.
T Consensus 160 al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~v~~l~~G~i~~~-~~~~~~~ 233 (250)
T PRK14240 160 ALAVEPEVLLMDEPTSALDPISTLKIEELIQELKKDYTIVIVTHNMQQASRISDKTAFFLNGEIVEF-GDTVDLF 233 (250)
T ss_pred HHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEEeCHHHHHhhCCEEEEEECCEEEEe-CCHHHHH
Confidence 999999999999999999999999999999876 35999999999999999999999999999854 5555543
No 431
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4e-38 Score=331.01 Aligned_cols=203 Identities=25% Similarity=0.387 Sum_probs=171.6
Q ss_pred ceEEEEeEEEEcCC------eecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccce-------
Q 005532 423 SVVTIKNLEFGYED------RLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL------- 489 (692)
Q Consensus 423 ~~l~~~~l~~~y~~------~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~~------- 489 (692)
++|+++|++++|++ +++|+++||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.++.
T Consensus 3 ~~l~~~~l~~~~~~~~~~~~~~vl~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~ 82 (280)
T PRK13633 3 EMIKCKNVSYKYESNEESTEKLALDDVNLEVKKGEFLVILGRNGSGKSTIAKHMNALLIPSEGKVYVDGLDTSDEENLWD 82 (280)
T ss_pred ceEEEeeeEEEcCCCCCCCCcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEeccccccHHH
Confidence 47999999999973 46999999999999999999999999999999999999999999999986542
Q ss_pred ----eeeecccchhhcCCCccHHHHHHHHhcc--cc----HHHHHHHHhhcCCCcccccccCCCCCHHHHHHHHHHHHhc
Q 005532 490 ----PNYFEQNQAEALDLDKTVLETVAEAAED--WR----IDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMV 559 (692)
Q Consensus 490 ----~~~~~q~~~~~l~~~~tv~e~~~~~~~~--~~----~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~LAral~ 559 (692)
.+|++|+....+ ...++.+++...... .. ...+..+++.+|+. ...++++.+|||||||||+|||+|+
T Consensus 83 ~~~~i~~v~q~~~~~~-~~~~v~~~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~-~~~~~~~~~LS~G~~qrv~laral~ 160 (280)
T PRK13633 83 IRNKAGMVFQNPDNQI-VATIVEEDVAFGPENLGIPPEEIRERVDESLKKVGMY-EYRRHAPHLLSGGQKQRVAIAGILA 160 (280)
T ss_pred HhhheEEEecChhhhh-ccccHHHHHHhhHhhcCCCHHHHHHHHHHHHHHCCCH-hHhhCCcccCCHHHHHHHHHHHHHH
Confidence 245666532223 246889988754221 11 23577889999995 6788999999999999999999999
Q ss_pred cCCcEEEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEECCEEEEecCChhHHH
Q 005532 560 KPSTLLVLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYYL 629 (692)
Q Consensus 560 ~~p~lLlLDEPTn~LD~~~~~~l~~~l~~~----~~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~~~~ 629 (692)
.+|+||||||||++||+.++..+.+.|.++ +.|||+||||++++.. ||++++|++|++.. .|+.+++.
T Consensus 161 ~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvtH~~~~~~~-~d~v~~l~~G~i~~-~g~~~~~~ 232 (280)
T PRK13633 161 MRPECIIFDEPTAMLDPSGRREVVNTIKELNKKYGITIILITHYMEEAVE-ADRIIVMDSGKVVM-EGTPKEIF 232 (280)
T ss_pred cCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecChHHHhc-CCEEEEEECCEEEE-ecCHHHHh
Confidence 999999999999999999999999999865 4599999999999986 99999999999974 47766654
No 432
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.4e-38 Score=329.26 Aligned_cols=202 Identities=27% Similarity=0.434 Sum_probs=171.1
Q ss_pred ceEEEEeEEEEcC--CeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccce----------e
Q 005532 423 SVVTIKNLEFGYE--DRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL----------P 490 (692)
Q Consensus 423 ~~l~~~~l~~~y~--~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~~----------~ 490 (692)
++|+++|+++.|+ ++++|+++||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++. .
T Consensus 6 ~~l~~~nl~~~~~~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~i 85 (271)
T PRK13632 6 VMIKVENVSFSYPNSENNALKNVSFEINEGEYVAILGHNGSGKSTISKILTGLLKPQSGEIKIDGITISKENLKEIRKKI 85 (271)
T ss_pred eEEEEEeEEEEcCCCCccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEecCcCCHHHHhcce
Confidence 4799999999995 467999999999999999999999999999999999999999999999886642 3
Q ss_pred eeecccchhhcCCCccHHHHHHHHhcc--cc----HHHHHHHHhhcCCCcccccccCCCCCHHHHHHHHHHHHhccCCcE
Q 005532 491 NYFEQNQAEALDLDKTVLETVAEAAED--WR----IDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTL 564 (692)
Q Consensus 491 ~~~~q~~~~~l~~~~tv~e~~~~~~~~--~~----~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~LAral~~~p~l 564 (692)
+|++|+.. ...+..|+.+|+...... .. ...+.++++.+++. ...++++.+||||||||++|||||+.+|+|
T Consensus 86 ~~v~q~~~-~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LS~G~~qrl~laral~~~p~l 163 (271)
T PRK13632 86 GIIFQNPD-NQFIGATVEDDIAFGLENKKVPPKKMKDIIDDLAKKVGME-DYLDKEPQNLSGGQKQRVAIASVLALNPEI 163 (271)
T ss_pred EEEEeCHH-HhcCcccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCCH-HHhhCCcccCCHHHHHHHHHHHHHHcCCCE
Confidence 46666532 234568999998754211 11 12467889999995 568899999999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEECCEEEEecCChhHH
Q 005532 565 LVLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYY 628 (692)
Q Consensus 565 LlLDEPTn~LD~~~~~~l~~~l~~~----~~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~~~ 628 (692)
|||||||++||+.+++.+.++|+++ +.|||+||||.+++. .||++++|++|++.. .|+.+++
T Consensus 164 llLDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~-~~d~v~~l~~G~i~~-~g~~~~~ 229 (271)
T PRK13632 164 IIFDESTSMLDPKGKREIKKIMVDLRKTRKKTLISITHDMDEAI-LADKVIVFSEGKLIA-QGKPKEI 229 (271)
T ss_pred EEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEEechhHHh-hCCEEEEEECCEEEE-ecCHHHH
Confidence 9999999999999999999999865 259999999999996 799999999999974 4665544
No 433
>cd03299 ABC_ModC_like Archeal protein closely related to ModC. ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6e-38 Score=321.52 Aligned_cols=200 Identities=30% Similarity=0.457 Sum_probs=171.6
Q ss_pred EEEEeEEEEcCCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccce--------eeeeccc
Q 005532 425 VTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL--------PNYFEQN 496 (692)
Q Consensus 425 l~~~~l~~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~~--------~~~~~q~ 496 (692)
|+++|+++.|++. +|+++||+|.+||++||+|+||||||||+++|+|+++|++|+|.++|.++. .+|++|+
T Consensus 1 l~~~~l~~~~~~~-~l~~is~~i~~Ge~~~i~G~nG~GKStLl~~l~G~~~p~~G~v~i~g~~~~~~~~~~~~i~~~~q~ 79 (235)
T cd03299 1 LKVENLSKDWKEF-KLKNVSLEVERGDYFVILGPTGSGKSVLLETIAGFIKPDSGKILLNGKDITNLPPEKRDISYVPQN 79 (235)
T ss_pred CeeEeEEEEeCCc-eeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcCcCChhHcCEEEEeec
Confidence 4689999999865 899999999999999999999999999999999999999999999986542 3456654
Q ss_pred chhhcCCCccHHHHHHHHhccc------cHHHHHHHHhhcCCCcccccccCCCCCHHHHHHHHHHHHhccCCcEEEEeCC
Q 005532 497 QAEALDLDKTVLETVAEAAEDW------RIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEP 570 (692)
Q Consensus 497 ~~~~l~~~~tv~e~~~~~~~~~------~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~LAral~~~p~lLlLDEP 570 (692)
..+.+..|+.+|+....... ....+.++++.+++. ...++++.+|||||+|||+|||||+.+|++||||||
T Consensus 80 --~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LS~G~~qrl~laral~~~p~llllDEP 156 (235)
T cd03299 80 --YALFPHMTVYKNIAYGLKKRKVDKKEIERKVLEIAEMLGID-HLLNRKPETLSGGEQQRVAIARALVVNPKILLLDEP 156 (235)
T ss_pred --CccCCCccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCh-hHHhcCcccCCHHHHHHHHHHHHHHcCCCEEEECCC
Confidence 34556789999987543211 123467889999995 668899999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEECCEEEEecCChhHHH
Q 005532 571 TNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYYL 629 (692)
Q Consensus 571 Tn~LD~~~~~~l~~~l~~~----~~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~~~~ 629 (692)
|++||+.+++++.+.|+++ +.|||++|||++++..+||++++|++|++.. .|+++...
T Consensus 157 t~gLD~~~~~~l~~~l~~~~~~~~~tili~tH~~~~~~~~~d~i~~l~~G~i~~-~~~~~~~~ 218 (235)
T cd03299 157 FSALDVRTKEKLREELKKIRKEFGVTVLHVTHDFEEAWALADKVAIMLNGKLIQ-VGKPEEVF 218 (235)
T ss_pred cccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCEEEE-ecCHHHHH
Confidence 9999999999999998864 4699999999999999999999999999984 46666554
No 434
>PRK15056 manganese/iron transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.5e-38 Score=330.17 Aligned_cols=202 Identities=21% Similarity=0.352 Sum_probs=166.3
Q ss_pred eEEEEeEEEEcC-CeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccc-------eeeeecc
Q 005532 424 VVTIKNLEFGYE-DRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNV-------LPNYFEQ 495 (692)
Q Consensus 424 ~l~~~~l~~~y~-~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~-------~~~~~~q 495 (692)
+|+++||++.|+ ++++|+|+||+|++|+++||+||||||||||+++|+|+++|++|+|.++|.++ ..+|++|
T Consensus 6 ~l~~~~l~~~~~~~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~i~~v~q 85 (272)
T PRK15056 6 GIVVNDVTVTWRNGHTALRDASFTVPGGSIAALVGVNGSGKSTLFKALMGFVRLASGKISILGQPTRQALQKNLVAYVPQ 85 (272)
T ss_pred eEEEEeEEEEecCCcEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEhHHhhccceEEEecc
Confidence 589999999996 57899999999999999999999999999999999999999999999998654 2456666
Q ss_pred cchhhcCCCccHHHHHHHHhc----------cccHHHHHHHHhhcCCCcccccccCCCCCHHHHHHHHHHHHhccCCcEE
Q 005532 496 NQAEALDLDKTVLETVAEAAE----------DWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLL 565 (692)
Q Consensus 496 ~~~~~l~~~~tv~e~~~~~~~----------~~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~LAral~~~p~lL 565 (692)
+.........++.+++..... ......+..+++.+|+. ...++++.+||||||||++|||||+.+|+||
T Consensus 86 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~-~~~~~~~~~LSgG~~qrv~laraL~~~p~ll 164 (272)
T PRK15056 86 SEEVDWSFPVLVEDVVMMGRYGHMGWLRRAKKRDRQIVTAALARVDMV-EFRHRQIGELSGGQKKRVFLARAIAQQGQVI 164 (272)
T ss_pred ccccccCCCcchhhheecccccccccccCCCHHHHHHHHHHHHHcCCh-hHhcCCcccCCHHHHHHHHHHHHHhcCCCEE
Confidence 532111223456666542110 01123467789999995 5678999999999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhccEEEEEECCEEEEecCChhHH
Q 005532 566 VLDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYY 628 (692)
Q Consensus 566 lLDEPTn~LD~~~~~~l~~~l~~~---~~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~~~ 628 (692)
||||||++||+.+++.+.+.|.++ +.|||+||||++++..+||+++.+ +|++.. .|..++.
T Consensus 165 llDEPt~~LD~~~~~~l~~~L~~~~~~g~tviivsH~~~~~~~~~d~v~~~-~G~i~~-~g~~~~~ 228 (272)
T PRK15056 165 LLDEPFTGVDVKTEARIISLLRELRDEGKTMLVSTHNLGSVTEFCDYTVMV-KGTVLA-SGPTETT 228 (272)
T ss_pred EEeCCCccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEE-CCEEEe-ecCHHhc
Confidence 999999999999999999999865 459999999999999999999877 899874 4665554
No 435
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.5e-38 Score=353.79 Aligned_cols=207 Identities=26% Similarity=0.458 Sum_probs=173.3
Q ss_pred CCceEEEEeEEEEcCCe---ecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccce--------
Q 005532 421 GRSVVTIKNLEFGYEDR---LLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL-------- 489 (692)
Q Consensus 421 ~~~~l~~~~l~~~y~~~---~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~~-------- 489 (692)
-...|+++||+|.|+.+ ++|+|+||+|+|||+||||||||+||||+.++|.++++|++|+|.+||.+++
T Consensus 462 ~~G~IeF~~VsFaYP~Rp~~~Vlk~lsfti~pGe~vALVGPSGsGKSTiasLL~rfY~PtsG~IllDG~~i~~~~~~~lr 541 (716)
T KOG0058|consen 462 LQGVIEFEDVSFAYPTRPDVPVLKNLSFTIRPGEVVALVGPSGSGKSTIASLLLRFYDPTSGRILLDGVPISDINHKYLR 541 (716)
T ss_pred ccceEEEEEeeeecCCCCCchhhcCceeeeCCCCEEEEECCCCCCHHHHHHHHHHhcCCCCCeEEECCeehhhcCHHHHH
Confidence 34569999999999865 5999999999999999999999999999999999999999999999998873
Q ss_pred --eeeecccchhhcCCCccHHHHHHHHhccccHHHHHHHHhhcC-------CCc---ccccccCCCCCHHHHHHHHHHHH
Q 005532 490 --PNYFEQNQAEALDLDKTVLETVAEAAEDWRIDDIKGLLGRCN-------FKA---DMLDRKVSLLSGGEKARLAFCKF 557 (692)
Q Consensus 490 --~~~~~q~~~~~l~~~~tv~e~~~~~~~~~~~~~~~~~L~~~~-------l~~---~~~~~~~~~LSgGqkqrv~LAra 557 (692)
++++.|++ . .+..|+.|||.........+++....+..+ |+. .....+..+||||||||+|||||
T Consensus 542 ~~Ig~V~QEP--v-LFs~sI~eNI~YG~~~~t~e~i~~AAk~ANah~FI~~~p~gY~T~VGEkG~qLSGGQKQRIAIARA 618 (716)
T KOG0058|consen 542 RKIGLVGQEP--V-LFSGSIRENIAYGLDNATDEEIEAAAKMANAHEFITNFPDGYNTVVGEKGSQLSGGQKQRIAIARA 618 (716)
T ss_pred HHeeeeeccc--e-eecccHHHHHhcCCCCCCHHHHHHHHHHhChHHHHHhCccccccccCCccccccchHHHHHHHHHH
Confidence 34555543 3 468999999998766555555554444332 221 12334556999999999999999
Q ss_pred hccCCcEEEEeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhccEEEEEECCEEEEecCChhHHHHHh
Q 005532 558 MVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY--KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYYLEKN 632 (692)
Q Consensus 558 l~~~p~lLlLDEPTn~LD~~~~~~l~~~l~~~--~~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~~~~~~~ 632 (692)
|+++|.||||||.||+||.++...++++|.+. +.|||+|.|++..+++ +|+|+++++|++++ .|++++.....
T Consensus 619 Llr~P~VLILDEATSALDaeSE~lVq~aL~~~~~~rTVlvIAHRLSTV~~-Ad~Ivvi~~G~V~E-~G~h~eLl~~~ 693 (716)
T KOG0058|consen 619 LLRNPRVLILDEATSALDAESEYLVQEALDRLMQGRTVLVIAHRLSTVRH-ADQIVVIDKGRVVE-MGTHDELLSKP 693 (716)
T ss_pred HhcCCCEEEEechhhhcchhhHHHHHHHHHHhhcCCeEEEEehhhhHhhh-ccEEEEEcCCeEEe-cccHHHHhhCc
Confidence 99999999999999999999999999999754 4699999999999988 99999999999996 48888776644
No 436
>PRK14238 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.8e-38 Score=328.30 Aligned_cols=207 Identities=25% Similarity=0.379 Sum_probs=170.9
Q ss_pred CCCCceEEEEeEEEEcCCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCC-----CCeeEEEECCccce----
Q 005532 419 RSGRSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEK-----PRGGEVLLGEHNVL---- 489 (692)
Q Consensus 419 ~~~~~~l~~~~l~~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~-----p~~G~i~~~~~~~~---- 489 (692)
.|+.++|+++|+++.|+++.+|+++||+|++||++||+|+||||||||+++|+|+++ |++|+|.++|.++.
T Consensus 19 ~~~~~~l~~~~l~~~~~~~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~ 98 (271)
T PRK14238 19 APKKVVFDTQNLNLWYGEDHALKNINLDIHENEVTAIIGPSGCGKSTYIKTLNRMVELVPSVKTTGKILYRDQNIFDKSY 98 (271)
T ss_pred CCCceEEEEeeeEEEECCcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceeEEECCEEcccccc
Confidence 345668999999999988889999999999999999999999999999999999987 69999999886541
Q ss_pred --------eeeecccchhhcCCCccHHHHHHHHhc--c-cc----HHHHHHHHhhcCCC---cccccccCCCCCHHHHHH
Q 005532 490 --------PNYFEQNQAEALDLDKTVLETVAEAAE--D-WR----IDDIKGLLGRCNFK---ADMLDRKVSLLSGGEKAR 551 (692)
Q Consensus 490 --------~~~~~q~~~~~l~~~~tv~e~~~~~~~--~-~~----~~~~~~~L~~~~l~---~~~~~~~~~~LSgGqkqr 551 (692)
.+|++|+. .++. .|+.+|+..... . .. ...+.++++.+++. ....++++.+||||||||
T Consensus 99 ~~~~~~~~i~~v~q~~--~~~~-~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~LSgGe~qr 175 (271)
T PRK14238 99 SVEELRTNVGMVFQKP--NPFP-KSIYDNVTYGPKIHGIKDKKTLDEIVEKSLRGAAIWDELKDRLHDNAYGLSGGQQQR 175 (271)
T ss_pred cHHHHhhhEEEEecCC--cccc-ccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCcchHHHHHhcCcccCCHHHHHH
Confidence 34666643 3443 599999875321 1 11 12245566666431 234678899999999999
Q ss_pred HHHHHHhccCCcEEEEeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhccEEEEEECCEEEEecCChhHHH
Q 005532 552 LAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY--KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYYL 629 (692)
Q Consensus 552 v~LAral~~~p~lLlLDEPTn~LD~~~~~~l~~~l~~~--~~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~~~~ 629 (692)
|+|||+|+.+|+||||||||++||+.++.++.++|.++ +.|||+||||++++..+||++++|++|++..+ |+.+++.
T Consensus 176 v~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivsH~~~~i~~~~d~i~~l~~G~i~~~-g~~~~~~ 254 (271)
T PRK14238 176 LCIARCLAIEPDVILMDEPTSALDPISTLKVEELVQELKKDYSIIIVTHNMQQAARISDKTAFFLNGYVNEY-DDTDKIF 254 (271)
T ss_pred HHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHcCCEEEEEEcCHHHHHHhCCEEEEEECCEEEEe-CCHHHHH
Confidence 99999999999999999999999999999999999876 36999999999999999999999999999854 6666553
No 437
>cd03249 ABC_MTABC3_MDL1_MDL2 MTABC3 (also known as ABCB6) is a mitochondrial ATP-binding cassette protein involved in iron homeostasis and one of four ABC transporters expressed in the mitochondrial inner membrane, the other three being MDL1(ABC7), MDL2, and ATM1. In fact, the yeast MDL1 (multidrug resistance-like protein 1) and MDL2 (multidrug resistance-like protein 2) transporters are also included in this CD. MDL1 is an ATP-dependent permease that acts as a high-copy suppressor of ATM1 and is thought to have a role in resistance to oxidative stress. Interestingly, subfamily B is more closely related to the carboxyl-terminal component of subfamily C than the two halves of ABCC molecules are with one another.
Probab=100.00 E-value=1.9e-38 Score=325.84 Aligned_cols=206 Identities=24% Similarity=0.407 Sum_probs=160.4
Q ss_pred EEEEeEEEEeCC---eeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC----------ceEE
Q 005532 98 VKLENISKSYKG---VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN----------MKIA 164 (692)
Q Consensus 98 l~i~~ls~~y~~---~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~----------~~i~ 164 (692)
|+++|+++.|++ +++|+|+||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|.+ ..++
T Consensus 1 l~i~~l~~~~~~~~~~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 80 (238)
T cd03249 1 IEFKNVSFRYPSRPDVPILKGLSLTIPPGKTVALVGSSGCGKSTVVSLLERFYDPTSGEILLDGVDIRDLNLRWLRSQIG 80 (238)
T ss_pred CeEEEEEEecCCCCCccceeceEEEecCCCEEEEEeCCCCCHHHHHHHHhccCCCCCCEEEECCEehhhcCHHHHHhhEE
Confidence 468999999974 469999999999999999999999999999999999999999999998732 2599
Q ss_pred EEcccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHHhh
Q 005532 165 FLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMP 244 (692)
Q Consensus 165 ~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~ 244 (692)
|++|++.++. .||.+|+....... . . +.+...++ .. .+.+++.
T Consensus 81 ~~~q~~~~~~-~tv~e~l~~~~~~~-~-~---~~~~~~~~------------------------~~-------~~~~~~~ 123 (238)
T cd03249 81 LVSQEPVLFD-GTIAENIRYGKPDA-T-D---EEVEEAAK------------------------KA-------NIHDFIM 123 (238)
T ss_pred EECCchhhhh-hhHHHHhhccCCCC-C-H---HHHHHHHH------------------------Hc-------ChHHHHH
Confidence 9999987754 69999985321100 0 0 00000000 00 0112222
Q ss_pred hc--CCCccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc--CCCeEEEEecCHHHHH
Q 005532 245 EL--GFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVIISHDRAFLD 320 (692)
Q Consensus 245 ~l--gl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~--~~~tvI~vsHd~~~l~ 320 (692)
.+ |+. ...++++.+|||||+|||+|||||+.+|++|||||||++||+.+++++.++|++ .+.|||++||+++++.
T Consensus 124 ~l~~~~~-~~~~~~~~~LS~G~~qrv~la~al~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~g~~vi~~sh~~~~~~ 202 (238)
T cd03249 124 SLPDGYD-TLVGERGSQLSGGQKQRIAIARALLRNPKILLLDEATSALDAESEKLVQEALDRAMKGRTTIVIAHRLSTIR 202 (238)
T ss_pred hhccccc-eeeccCCccCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHh
Confidence 22 332 245677899999999999999999999999999999999999999999888753 5789999999999997
Q ss_pred hhcCeEEEEecceEEEeccChHH
Q 005532 321 QLCTKIVETEMGVSRTYEGNYSQ 343 (692)
Q Consensus 321 ~~~d~i~~l~~G~~~~~~G~y~~ 343 (692)
.||+|+++++|++ .+.|...+
T Consensus 203 -~~d~v~~l~~G~i-~~~~~~~~ 223 (238)
T cd03249 203 -NADLIAVLQNGQV-VEQGTHDE 223 (238)
T ss_pred -hCCEEEEEECCEE-EEeCCHHH
Confidence 8999999999997 45565433
No 438
>TIGR00968 3a0106s01 sulfate ABC transporter, ATP-binding protein.
Probab=100.00 E-value=7.7e-38 Score=321.11 Aligned_cols=201 Identities=27% Similarity=0.414 Sum_probs=172.6
Q ss_pred EEEEeEEEEcCCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccce--------eeeeccc
Q 005532 425 VTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL--------PNYFEQN 496 (692)
Q Consensus 425 l~~~~l~~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~~--------~~~~~q~ 496 (692)
|+++|+++.|+++.+|+++||+|.+|+++||+|+||||||||+++|+|+++|++|+|.++|.++. .+|++|.
T Consensus 1 i~i~~l~~~~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~i~g~~~~~~~~~~~~i~~~~q~ 80 (237)
T TIGR00968 1 IEIANISKRFGSFQALDDVNLEVPTGSLVALLGPSGSGKSTLLRIIAGLEQPDSGRIRLNGQDATRVHARDRKIGFVFQH 80 (237)
T ss_pred CEEEEEEEEECCeeeeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCChhhcCEEEEecC
Confidence 47899999999889999999999999999999999999999999999999999999999886642 2455554
Q ss_pred chhhcCCCccHHHHHHHHhcc------ccHHHHHHHHhhcCCCcccccccCCCCCHHHHHHHHHHHHhccCCcEEEEeCC
Q 005532 497 QAEALDLDKTVLETVAEAAED------WRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEP 570 (692)
Q Consensus 497 ~~~~l~~~~tv~e~~~~~~~~------~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~LAral~~~p~lLlLDEP 570 (692)
..+++..|+.+|+...... .....+.++++.+++. ...++.+..|||||+||++|||+|+.+|++||||||
T Consensus 81 --~~~~~~~t~~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~lS~G~~qrl~laral~~~p~llllDEP 157 (237)
T TIGR00968 81 --YALFKHLTVRDNIAFGLEIRKHPKAKIKARVEELLELVQLE-GLGDRYPNQLSGGQRQRVALARALAVEPQVLLLDEP 157 (237)
T ss_pred --hhhccCCcHHHHHHhHHHhcCCCHHHHHHHHHHHHHHcCCH-hHhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 3455678999998754321 1123567889999995 568899999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEECCEEEEecCChhHHH
Q 005532 571 TNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYYL 629 (692)
Q Consensus 571 Tn~LD~~~~~~l~~~l~~~----~~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~~~~ 629 (692)
|++||+.+++.+.+.|.+. +.|||++||+++++.++||++++|++|++.. .|..+.+.
T Consensus 158 ~~~LD~~~~~~~~~~l~~~~~~~~~tvli~sH~~~~~~~~~d~i~~l~~g~i~~-~~~~~~~~ 219 (237)
T TIGR00968 158 FGALDAKVRKELRSWLRKLHDEVHVTTVFVTHDQEEAMEVADRIVVMSNGKIEQ-IGSPDEVY 219 (237)
T ss_pred cccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCEEEEEECCEEEE-ecCHHHHH
Confidence 9999999999999999864 4699999999999999999999999999985 46555543
No 439
>cd03267 ABC_NatA_like Similar in sequence to NatA, this is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled to proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilis, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of the single ATP-binding protein and the single intergral membrane protein.
Probab=100.00 E-value=3.9e-38 Score=323.10 Aligned_cols=187 Identities=28% Similarity=0.374 Sum_probs=158.7
Q ss_pred EEcCCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccc---------eeeeecccchhhcC
Q 005532 432 FGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNV---------LPNYFEQNQAEALD 502 (692)
Q Consensus 432 ~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~---------~~~~~~q~~~~~l~ 502 (692)
+.|+.+++|+++||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|.++ ..+|+.+. ...+.
T Consensus 29 ~~~~~~~il~~vs~~i~~Ge~~~i~G~NGsGKSTLl~~i~Gl~~p~~G~i~~~g~~~~~~~~~~~~~i~~~~~~-~~~~~ 107 (236)
T cd03267 29 RKYREVEALKGISFTIEKGEIVGFIGPNGAGKTTTLKILSGLLQPTSGEVRVAGLVPWKRRKKFLRRIGVVFGQ-KTQLW 107 (236)
T ss_pred cccCCeeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEccccchhhcccEEEEcCC-ccccC
Confidence 567778899999999999999999999999999999999999999999999988643 12344422 23455
Q ss_pred CCccHHHHHHHHhcc--cc----HHHHHHHHhhcCCCcccccccCCCCCHHHHHHHHHHHHhccCCcEEEEeCCCCCCCH
Q 005532 503 LDKTVLETVAEAAED--WR----IDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDI 576 (692)
Q Consensus 503 ~~~tv~e~~~~~~~~--~~----~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~LAral~~~p~lLlLDEPTn~LD~ 576 (692)
+..|+.+++...... .. ...+..+++.+++. ...++++.+||||||||++||+||+.+|+||||||||++||+
T Consensus 108 ~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~-~~~~~~~~~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~ 186 (236)
T cd03267 108 WDLPVIDSFYLLAAIYDLPPARFKKRLDELSELLDLE-ELLDTPVRQLSLGQRMRAEIAAALLHEPEILFLDEPTIGLDV 186 (236)
T ss_pred CCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCh-hHhcCChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCH
Confidence 678999998653221 11 23466788999995 567889999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEECCEEEE
Q 005532 577 PSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQD 620 (692)
Q Consensus 577 ~~~~~l~~~l~~~----~~tviivSHd~~~l~~~~d~i~~l~~g~l~~ 620 (692)
.+++.+.++|.++ +.|||+||||++++..+||++++|++|++..
T Consensus 187 ~~~~~l~~~l~~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~ 234 (236)
T cd03267 187 VAQENIRNFLKEYNRERGTTVLLTSHYMKDIEALARRVLVIDKGRLLY 234 (236)
T ss_pred HHHHHHHHHHHHHHhcCCCEEEEEecCHHHHHHhCCEEEEEeCCEEEe
Confidence 9999999999876 3599999999999999999999999999863
No 440
>PRK14237 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-37 Score=325.73 Aligned_cols=204 Identities=24% Similarity=0.318 Sum_probs=171.7
Q ss_pred CceEEEEeEEEEcCCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCC-----CCeeEEEECCccce-------
Q 005532 422 RSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEK-----PRGGEVLLGEHNVL------- 489 (692)
Q Consensus 422 ~~~l~~~~l~~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~-----p~~G~i~~~~~~~~------- 489 (692)
..+|+++||+++|+++++|+++||+|.+||++||+|+||||||||+++|+|+++ |++|+|.++|.++.
T Consensus 18 ~~~l~~~nl~~~~~~~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~ 97 (267)
T PRK14237 18 EIALSTKDLHVYYGKKEAIKGIDMQFEKNKITALIGPSGSGKSTYLRSLNRMNDTIDIARVTGQILYRGIDINRKEINVY 97 (267)
T ss_pred CeEEEEeeEEEEECCeeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhccCccCCCCcceEEEECCEEcccccCChH
Confidence 347999999999998899999999999999999999999999999999999986 58999999986642
Q ss_pred -----eeeecccchhhcCCCccHHHHHHHHhccc-------cHHHHHHHHhhcCCCc---ccccccCCCCCHHHHHHHHH
Q 005532 490 -----PNYFEQNQAEALDLDKTVLETVAEAAEDW-------RIDDIKGLLGRCNFKA---DMLDRKVSLLSGGEKARLAF 554 (692)
Q Consensus 490 -----~~~~~q~~~~~l~~~~tv~e~~~~~~~~~-------~~~~~~~~L~~~~l~~---~~~~~~~~~LSgGqkqrv~L 554 (692)
.+|++|.. .+.+ .|+.+|+....... ....+.++++.+++.. ...++++.+|||||+||++|
T Consensus 98 ~~~~~i~~v~q~~--~~~~-~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~~~~~~~~~~LS~G~~qrl~l 174 (267)
T PRK14237 98 EMRKHIGMVFQRP--NPFA-KSIYENITFALERAGVKDKKVLDEIVETSLKQAALWDQVKDDLHKSALTLSGGQQQRLCI 174 (267)
T ss_pred HHhcceEEEecCC--cccc-ccHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCCchhhhhhcCCcccCCHHHHHHHHH
Confidence 34555542 3433 69999997642211 1234667788888742 34678999999999999999
Q ss_pred HHHhccCCcEEEEeCCCCCCCHHHHHHHHHHHHhcC--ceEEEEecCHHHHHhhccEEEEEECCEEEEecCChhHHH
Q 005532 555 CKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEYK--GTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYYL 629 (692)
Q Consensus 555 Aral~~~p~lLlLDEPTn~LD~~~~~~l~~~l~~~~--~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~~~~ 629 (692)
||||+.+|++|||||||++||+.++..+.++|.++. .|||+||||.+++..+||++++|++|++..+ |+.+++.
T Consensus 175 aral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~-g~~~~~~ 250 (267)
T PRK14237 175 ARAIAVKPDILLMDEPASALDPISTMQLEETMFELKKNYTIIIVTHNMQQAARASDYTAFFYLGDLIEY-DKTRNIF 250 (267)
T ss_pred HHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhcCEEEEEECCEEEEe-CCHHHHh
Confidence 999999999999999999999999999999998763 5999999999999999999999999999854 6666653
No 441
>TIGR03608 L_ocin_972_ABC putative bacteriocin export ABC transporter, lactococcin 972 group. A gene pair with a fairly wide distribution consists of a polypeptide related to the lactococcin 972 (see TIGR01653) and multiple-membrane-spanning putative immunity protein (see TIGR01654). This model represents a small clade within the ABC transporters that regularly are found adjacent to these bacteriocin system gene pairs and are likely serve as export proteins.
Probab=100.00 E-value=3.2e-38 Score=316.83 Aligned_cols=183 Identities=34% Similarity=0.485 Sum_probs=157.2
Q ss_pred EEeEEEEcCCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccce--------------eee
Q 005532 427 IKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL--------------PNY 492 (692)
Q Consensus 427 ~~~l~~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~~--------------~~~ 492 (692)
++||++.|+++++|+++||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++. .+|
T Consensus 1 i~~l~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~i~~ 80 (206)
T TIGR03608 1 LKNISKKFGDKIILDDLNLTIEKGKMYAIIGESGSGKSTLLNIIGLLEKFDSGQVYLNGKETPPLNSKKASKFRREKLGY 80 (206)
T ss_pred CcceEEEECCEEEEeceEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccchhhHHHHHHhCeeE
Confidence 478999999889999999999999999999999999999999999999999999999987631 344
Q ss_pred ecccchhhcCCCccHHHHHHHHhcc------ccHHHHHHHHhhcCCCcccccccCCCCCHHHHHHHHHHHHhccCCcEEE
Q 005532 493 FEQNQAEALDLDKTVLETVAEAAED------WRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLV 566 (692)
Q Consensus 493 ~~q~~~~~l~~~~tv~e~~~~~~~~------~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~LAral~~~p~lLl 566 (692)
+.|. ..+++..|+.+|+...... .....+.++++.+++. ...++++.+||||||||++|||||+.+|++||
T Consensus 81 ~~q~--~~~~~~~t~~e~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~lS~G~~qr~~laral~~~p~lll 157 (206)
T TIGR03608 81 LFQN--FALIENETVEENLDLGLKYKKLSKKEKREKKKEALEKVGLN-LKLKQKIYELSGGEQQRVALARAILKDPPLIL 157 (206)
T ss_pred Eecc--hhhccCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCch-hhhcCChhhCCHHHHHHHHHHHHHHcCCCEEE
Confidence 5554 3456678999998763211 1124577899999994 56789999999999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhccEEEEE
Q 005532 567 LDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEV 613 (692)
Q Consensus 567 LDEPTn~LD~~~~~~l~~~l~~~---~~tviivSHd~~~l~~~~d~i~~l 613 (692)
|||||++||+.+++.+.+.|+++ +.|||+||||++++ .+||++++|
T Consensus 158 lDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~-~~~d~i~~l 206 (206)
T TIGR03608 158 ADEPTGSLDPKNRDEVLDLLLELNDEGKTIIIVTHDPEVA-KQADRVIEL 206 (206)
T ss_pred EeCCcCCCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHH-hhcCEEEeC
Confidence 99999999999999999999875 46999999999987 479999875
No 442
>PRK14262 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.7e-38 Score=322.91 Aligned_cols=203 Identities=22% Similarity=0.339 Sum_probs=169.7
Q ss_pred ceEEEEeEEEEcCCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCC-----CeeEEEECCccce--------
Q 005532 423 SVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKP-----RGGEVLLGEHNVL-------- 489 (692)
Q Consensus 423 ~~l~~~~l~~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p-----~~G~i~~~~~~~~-------- 489 (692)
++|+++|+++.|+++++|+++||+|++||+++|+|+||||||||+++|+|+++| ++|+|.++|.++.
T Consensus 2 ~~l~~~~l~~~~~~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~i~g~~~~~~~~~~~~ 81 (250)
T PRK14262 2 PIIEIENFSAYYGEKKAVKNVTMKIFKNQITAIIGPSGCGKTTLLRSINRMNDHIPGFRVEGKIYFKGQDIYDPQLDVTE 81 (250)
T ss_pred ceEEEEeeEEEeCCceeEeeeeEeecCCCEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEcccchhhHHH
Confidence 369999999999888899999999999999999999999999999999999874 8999999886542
Q ss_pred ----eeeecccchhhcCCCccHHHHHHHHhcc---cc----HHHHHHHHhhcCCCc---ccccccCCCCCHHHHHHHHHH
Q 005532 490 ----PNYFEQNQAEALDLDKTVLETVAEAAED---WR----IDDIKGLLGRCNFKA---DMLDRKVSLLSGGEKARLAFC 555 (692)
Q Consensus 490 ----~~~~~q~~~~~l~~~~tv~e~~~~~~~~---~~----~~~~~~~L~~~~l~~---~~~~~~~~~LSgGqkqrv~LA 555 (692)
.+|++|+. .+.. .|+.+|+...... .. ...+..+++.+++.. ...++++.+||||||||++||
T Consensus 82 ~~~~i~~~~q~~--~~~~-~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~Gq~qr~~la 158 (250)
T PRK14262 82 YRKKVGMVFQKP--TPFP-MSIYDNVAFGPRIHGVKSKHKLDRIVEESLKKAALWDEVKSELNKPGTRLSGGQQQRLCIA 158 (250)
T ss_pred hhhhEEEEecCC--ccCc-ccHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCCchhHHHHhCChhhcCHHHHHHHHHH
Confidence 34555543 3444 7999998754211 11 123567788888742 236789999999999999999
Q ss_pred HHhccCCcEEEEeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhccEEEEEECCEEEEecCChhHHH
Q 005532 556 KFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY--KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYYL 629 (692)
Q Consensus 556 ral~~~p~lLlLDEPTn~LD~~~~~~l~~~l~~~--~~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~~~~ 629 (692)
|||+.+|+||||||||++||+.++.++.+.|.++ +.|||+||||++++..+||+|++|++|++.. .|..++..
T Consensus 159 ~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tili~sH~~~~~~~~~d~i~~l~~G~i~~-~g~~~~~~ 233 (250)
T PRK14262 159 RALAVEPEVILLDEPTSALDPIATQRIEKLLEELSENYTIVIVTHNIGQAIRIADYIAFMYRGELIE-YGPTREIV 233 (250)
T ss_pred HHHhCCCCEEEEeCCccccCHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhCCEEEEEECCEEEE-ecCHHHHH
Confidence 9999999999999999999999999999999876 3599999999999999999999999999985 46655543
No 443
>cd03254 ABCC_Glucan_exporter_like Glucan exporter ATP-binding protein. In A. tumefaciens cyclic beta-1, 2-glucan must be transported into the periplasmic space to exert its action as a virluence factor. This subfamily belongs to the MRP-like family and is involved in drug, peptide, and lipid export. The MRP-like family, similar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains each composed of six transmembrane (TM) helices and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.8e-38 Score=320.22 Aligned_cols=200 Identities=24% Similarity=0.467 Sum_probs=163.6
Q ss_pred EEEEeEEEEcCC-eecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccce----------eeee
Q 005532 425 VTIKNLEFGYED-RLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL----------PNYF 493 (692)
Q Consensus 425 l~~~~l~~~y~~-~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~~----------~~~~ 493 (692)
|+++|+++.|++ +.+|+++||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.++. .+|+
T Consensus 3 l~~~~l~~~~~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~~ 82 (229)
T cd03254 3 IEFENVNFSYDEKKPVLKDINFSIKPGETVAIVGPTGAGKTTLINLLMRFYDPQKGQILIDGIDIRDISRKSLRSMIGVV 82 (229)
T ss_pred EEEEEEEEecCCCCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCEeHHHcCHHHHhhhEEEe
Confidence 789999999975 57999999999999999999999999999999999999999999999886542 3566
Q ss_pred cccchhhcCCCccHHHHHHHHhccccHHHHHHHHhhc-----------CCCcccccccCCCCCHHHHHHHHHHHHhccCC
Q 005532 494 EQNQAEALDLDKTVLETVAEAAEDWRIDDIKGLLGRC-----------NFKADMLDRKVSLLSGGEKARLAFCKFMVKPS 562 (692)
Q Consensus 494 ~q~~~~~l~~~~tv~e~~~~~~~~~~~~~~~~~L~~~-----------~l~~~~~~~~~~~LSgGqkqrv~LAral~~~p 562 (692)
+|+. .+.. .|+.+|+...........+...++.+ ++. ...++++.+|||||||||+|||+|+.+|
T Consensus 83 ~q~~--~~~~-~tv~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~LS~G~~~rv~la~al~~~p 158 (229)
T cd03254 83 LQDT--FLFS-GTIMENIRLGRPNATDEEVIEAAKEAGAHDFIMKLPNGYD-TVLGENGGNLSQGERQLLAIARAMLRDP 158 (229)
T ss_pred cCCc--hhhh-hHHHHHHhccCCCCCHHHHHHHHHHhChHHHHHhCccccc-CHhhcCCCcCCHHHHHHHHHHHHHhcCC
Confidence 6653 3333 49999987643222223333333333 332 2345678999999999999999999999
Q ss_pred cEEEEeCCCCCCCHHHHHHHHHHHHhcC--ceEEEEecCHHHHHhhccEEEEEECCEEEEecCChhHHHH
Q 005532 563 TLLVLDEPTNHLDIPSKEMLEEAISEYK--GTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYYLE 630 (692)
Q Consensus 563 ~lLlLDEPTn~LD~~~~~~l~~~l~~~~--~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~~~~~ 630 (692)
++|||||||++||+.+++.+.+.|.++. .|||+||||++++.. ||++++|++|++.. .|+++++..
T Consensus 159 ~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~-~d~i~~l~~g~~~~-~~~~~~~~~ 226 (229)
T cd03254 159 KILILDEATSNIDTETEKLIQEALEKLMKGRTSIIIAHRLSTIKN-ADKILVLDDGKIIE-EGTHDELLA 226 (229)
T ss_pred CEEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHhh-CCEEEEEeCCeEEE-eCCHHHHHh
Confidence 9999999999999999999999998763 599999999999975 99999999999984 677776644
No 444
>cd03244 ABCC_MRP_domain2 Domain 2 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminus, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resistance lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=3.8e-38 Score=319.86 Aligned_cols=200 Identities=27% Similarity=0.405 Sum_probs=157.0
Q ss_pred EEEEeEEEEeCC--eeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC----------ceEEE
Q 005532 98 VKLENISKSYKG--VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN----------MKIAF 165 (692)
Q Consensus 98 l~i~~ls~~y~~--~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~----------~~i~~ 165 (692)
|+++|++++|++ +++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.. ..|+|
T Consensus 3 l~~~~l~~~~~~~~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 82 (221)
T cd03244 3 IEFKNVSLRYRPNLPPVLKNISFSIKPGEKVGIVGRTGSGKSSLLLALFRLVELSSGSILIDGVDISKIGLHDLRSRISI 82 (221)
T ss_pred EEEEEEEEecCCCCcccccceEEEECCCCEEEEECCCCCCHHHHHHHHHcCCCCCCCEEEECCEEhHhCCHHHHhhhEEE
Confidence 889999999974 479999999999999999999999999999999999999999999998742 25999
Q ss_pred EcccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHHhhh
Q 005532 166 LSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPE 245 (692)
Q Consensus 166 v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~ 245 (692)
++|++.++ ..|+.+|+.. +.. .. .+++...++ .. .+...+..+ .
T Consensus 83 ~~q~~~l~-~~tv~enl~~-~~~-~~----~~~~~~~~~------------------------~~---~l~~~~~~l--~ 126 (221)
T cd03244 83 IPQDPVLF-SGTIRSNLDP-FGE-YS----DEELWQALE------------------------RV---GLKEFVESL--P 126 (221)
T ss_pred ECCCCccc-cchHHHHhCc-CCC-CC----HHHHHHHHH------------------------Hh---CcHHHHHhc--c
Confidence 99999864 4699999742 100 00 000000000 00 011111111 1
Q ss_pred cCCCccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc--CCCeEEEEecCHHHHHhhc
Q 005532 246 LGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVIISHDRAFLDQLC 323 (692)
Q Consensus 246 lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~--~~~tvI~vsHd~~~l~~~~ 323 (692)
.|+.. ..++++.+|||||+||++|||||+.+|++|||||||++||+.+++++.++|++ .+.|||++||+++++.. |
T Consensus 127 ~~l~~-~~~~~~~~LS~G~~qr~~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~-~ 204 (221)
T cd03244 127 GGLDT-VVEEGGENLSVGQRQLLCLARALLRKSKILVLDEATASVDPETDALIQKTIREAFKDCTVLTIAHRLDTIID-S 204 (221)
T ss_pred ccccc-ccccCCCcCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhh-C
Confidence 24432 34567899999999999999999999999999999999999999999988864 46899999999999976 9
Q ss_pred CeEEEEecceEE
Q 005532 324 TKIVETEMGVSR 335 (692)
Q Consensus 324 d~i~~l~~G~~~ 335 (692)
|+++++++|++.
T Consensus 205 d~i~~l~~g~~~ 216 (221)
T cd03244 205 DRILVLDKGRVV 216 (221)
T ss_pred CEEEEEECCeEE
Confidence 999999999874
No 445
>cd03289 ABCC_CFTR2 The CFTR subfamily domain 2. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=4.2e-38 Score=328.72 Aligned_cols=197 Identities=22% Similarity=0.391 Sum_probs=157.1
Q ss_pred EEEEeEEEEeC--CeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC----------ceEEE
Q 005532 98 VKLENISKSYK--GVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN----------MKIAF 165 (692)
Q Consensus 98 l~i~~ls~~y~--~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~----------~~i~~ 165 (692)
|+++|++++|+ +.++|+|+||+|++||+++|+|+||||||||+++|+|+++ ++|+|.++|.+ ..|+|
T Consensus 3 i~~~nls~~~~~~~~~~l~~isl~I~~Ge~~~IvG~nGsGKSTLl~~L~gl~~-~~G~I~i~g~~i~~~~~~~lr~~i~~ 81 (275)
T cd03289 3 MTVKDLTAKYTEGGNAVLENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN-TEGDIQIDGVSWNSVPLQKWRKAFGV 81 (275)
T ss_pred EEEEEEEEEeCCCCCcceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC-CCcEEEECCEEhhhCCHHHHhhhEEE
Confidence 89999999994 4679999999999999999999999999999999999998 78999998743 25999
Q ss_pred EcccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHHhhh
Q 005532 166 LSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPE 245 (692)
Q Consensus 166 v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~ 245 (692)
++|++.+++ .||++|+.. +.. .. ..++.++++.
T Consensus 82 v~q~~~lf~-~tv~~nl~~-~~~-~~--------------------------------------------~~~~~~~l~~ 114 (275)
T cd03289 82 IPQKVFIFS-GTFRKNLDP-YGK-WS--------------------------------------------DEEIWKVAEE 114 (275)
T ss_pred ECCCcccch-hhHHHHhhh-ccC-CC--------------------------------------------HHHHHHHHHH
Confidence 999998864 699999841 100 00 0011112222
Q ss_pred cCCCcccccc-----------ccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc--CCCeEEEE
Q 005532 246 LGFTADDGDR-----------LVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVII 312 (692)
Q Consensus 246 lgl~~~~~~~-----------~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~--~~~tvI~v 312 (692)
+|+. ...++ ....|||||+||++|||||+.+|+||||||||++||+.+...+.+.|++ .++|||+|
T Consensus 115 ~gL~-~~~~~~p~~l~~~~~~~g~~LS~G~~qrl~LaRall~~p~illlDEpts~LD~~~~~~l~~~l~~~~~~~tii~i 193 (275)
T cd03289 115 VGLK-SVIEQFPGQLDFVLVDGGCVLSHGHKQLMCLARSVLSKAKILLLDEPSAHLDPITYQVIRKTLKQAFADCTVILS 193 (275)
T ss_pred cCCH-HHHHhCcccccceecCCCCCCCHHHHHHHHHHHHHhcCCCEEEEECccccCCHHHHHHHHHHHHHhcCCCEEEEE
Confidence 2222 11122 2456999999999999999999999999999999999999999988764 47899999
Q ss_pred ecCHHHHHhhcCeEEEEecceEEEeccChHHHH
Q 005532 313 SHDRAFLDQLCTKIVETEMGVSRTYEGNYSQYV 345 (692)
Q Consensus 313 sHd~~~l~~~~d~i~~l~~G~~~~~~G~y~~~~ 345 (692)
||+++++.. ||+|++|++|++. +.|...+.+
T Consensus 194 sH~~~~i~~-~dri~vl~~G~i~-~~g~~~~l~ 224 (275)
T cd03289 194 EHRIEAMLE-CQRFLVIEENKVR-QYDSIQKLL 224 (275)
T ss_pred ECCHHHHHh-CCEEEEecCCeEe-ecCCHHHHh
Confidence 999999975 9999999999985 446554443
No 446
>cd03253 ABCC_ATM1_transporter ATM1 is an ABC transporter that is expressed in the mitochondria. Although the specific function of ATM1 is unknown, its disruption results in the accumulation of excess mitochondrial iron, loss of mitochondrial cytochromes, oxidative damage to mitochondrial DNA, and decreased levels of cytosolic heme proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.7e-38 Score=322.39 Aligned_cols=206 Identities=25% Similarity=0.389 Sum_probs=159.9
Q ss_pred EEEEeEEEEeC-CeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC----------ceEEEE
Q 005532 98 VKLENISKSYK-GVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN----------MKIAFL 166 (692)
Q Consensus 98 l~i~~ls~~y~-~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~----------~~i~~v 166 (692)
|+++|++++|+ ++.+|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.. ..++|+
T Consensus 1 l~~~~l~~~~~~~~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~v~~~g~~~~~~~~~~~~~~i~~~ 80 (236)
T cd03253 1 IEFENVTFAYDPGRPVLKDVSFTIPAGKKVAIVGPSGSGKSTILRLLFRFYDVSSGSILIDGQDIREVTLDSLRRAIGVV 80 (236)
T ss_pred CEEEEEEEEeCCCCceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCEEEECCEEhhhCCHHHHHhhEEEE
Confidence 46899999996 4679999999999999999999999999999999999999999999998743 249999
Q ss_pred cccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHHhhhc
Q 005532 167 SQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPEL 246 (692)
Q Consensus 167 ~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~l 246 (692)
+|++.++ ..|+.+|+....... .. ..+...+. . ..+.+.+..+
T Consensus 81 ~q~~~~~-~~tv~~nl~~~~~~~-~~----~~~~~~~~------------------------~-------~~l~~~~~~l 123 (236)
T cd03253 81 PQDTVLF-NDTIGYNIRYGRPDA-TD----EEVIEAAK------------------------A-------AQIHDKIMRF 123 (236)
T ss_pred CCCChhh-cchHHHHHhhcCCCC-CH----HHHHHHHH------------------------H-------cCcHHHHHhc
Confidence 9998875 579999985321100 00 00000000 0 0011222222
Q ss_pred --CCCccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc--CCCeEEEEecCHHHHHhh
Q 005532 247 --GFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVIISHDRAFLDQL 322 (692)
Q Consensus 247 --gl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~--~~~tvI~vsHd~~~l~~~ 322 (692)
|+. ...++++.+|||||||||+|||||+.+|++|||||||+|||+.+++.+.++|.+ .+.|||+|||+.+++..
T Consensus 124 ~~~~~-~~~~~~~~~LS~G~~~rl~la~aL~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~- 201 (236)
T cd03253 124 PDGYD-TIVGERGLKLSGGEKQRVAIARAILKNPPILLLDEATSALDTHTEREIQAALRDVSKGRTTIVIAHRLSTIVN- 201 (236)
T ss_pred ccccc-chhhcCCCcCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEcCCHHHHHh-
Confidence 333 234666899999999999999999999999999999999999999999887743 27899999999999975
Q ss_pred cCeEEEEecceEEEeccChHH
Q 005532 323 CTKIVETEMGVSRTYEGNYSQ 343 (692)
Q Consensus 323 ~d~i~~l~~G~~~~~~G~y~~ 343 (692)
||+++++++|++. +.|...+
T Consensus 202 ~d~~~~l~~g~i~-~~~~~~~ 221 (236)
T cd03253 202 ADKIIVLKDGRIV-ERGTHEE 221 (236)
T ss_pred CCEEEEEECCEEE-eeCCHHH
Confidence 9999999999974 5565443
No 447
>cd03247 ABCC_cytochrome_bd The CYD subfamily implicated in cytochrome bd biogenesis. The CydC and CydD proteins are important for the formation of cytochrome bd terminal oxidase of E. coli and it has been proposed that they were necessary for biosynthesis of the cytochrome bd quinol oxidase and for periplasmic c-type cytochromes. CydCD were proposed to determine a heterooligomeric complex important for heme export into the periplasm or to be involved in the maintenance of the proper redox state of the periplasmic space. In Bacillus subtilius, the absence of CydCD does not affect the presence of halo-cytochrome c in the membrane and this observation suggests that CydCD proteins are not involved in the export of heme in this organism.
Probab=100.00 E-value=4.1e-38 Score=308.99 Aligned_cols=162 Identities=33% Similarity=0.478 Sum_probs=144.4
Q ss_pred EEEEeEEEEeCCe--eceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC---------ceEEEE
Q 005532 98 VKLENISKSYKGV--TVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN---------MKIAFL 166 (692)
Q Consensus 98 l~i~~ls~~y~~~--~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~---------~~i~~v 166 (692)
|+++|++++|++. ++|+|+||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|.. ..++|+
T Consensus 1 i~~~~~~~~~~~~~~~~l~~i~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~i~~~ 80 (178)
T cd03247 1 LSINNVSFSYPEQEQQVLKNLSLELKQGEKIALLGRSGSGKSTLLQLLTGDLKPQQGEITLDGVPVSDLEKALSSLISVL 80 (178)
T ss_pred CEEEEEEEEeCCCCccceEEEEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCEEHHHHHHHHHhhEEEE
Confidence 4689999999775 79999999999999999999999999999999999999999999998742 358999
Q ss_pred cccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHHhhhc
Q 005532 167 SQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPEL 246 (692)
Q Consensus 167 ~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~l 246 (692)
+|++.++ ..|+++|+
T Consensus 81 ~q~~~~~-~~tv~~~i---------------------------------------------------------------- 95 (178)
T cd03247 81 NQRPYLF-DTTLRNNL---------------------------------------------------------------- 95 (178)
T ss_pred ccCCeee-cccHHHhh----------------------------------------------------------------
Confidence 9998764 35665542
Q ss_pred CCCccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc--CCCeEEEEecCHHHHHhhcC
Q 005532 247 GFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVIISHDRAFLDQLCT 324 (692)
Q Consensus 247 gl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~--~~~tvI~vsHd~~~l~~~~d 324 (692)
+.+|||||+||++|||||+.+|++|||||||++||+.+++.+.+.|++ .+.|||++||+++++. .||
T Consensus 96 ----------~~~LS~G~~qrv~laral~~~p~~lllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~-~~d 164 (178)
T cd03247 96 ----------GRRFSGGERQRLALARILLQDAPIVLLDEPTVGLDPITERQLLSLIFEVLKDKTLIWITHHLTGIE-HMD 164 (178)
T ss_pred ----------cccCCHHHHHHHHHHHHHhcCCCEEEEECCcccCCHHHHHHHHHHHHHHcCCCEEEEEecCHHHHH-hCC
Confidence 467999999999999999999999999999999999999999887753 4789999999999996 699
Q ss_pred eEEEEecceEE
Q 005532 325 KIVETEMGVSR 335 (692)
Q Consensus 325 ~i~~l~~G~~~ 335 (692)
+++++++|++.
T Consensus 165 ~~~~l~~g~i~ 175 (178)
T cd03247 165 KILFLENGKII 175 (178)
T ss_pred EEEEEECCEEE
Confidence 99999999874
No 448
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=1.3e-37 Score=358.78 Aligned_cols=206 Identities=26% Similarity=0.417 Sum_probs=176.3
Q ss_pred CCceEEEEeEEEEcCCe--ecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccce---------
Q 005532 421 GRSVVTIKNLEFGYEDR--LLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL--------- 489 (692)
Q Consensus 421 ~~~~l~~~~l~~~y~~~--~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~~--------- 489 (692)
-..-++++||+|+|+.. ++|+|+||+|++||+|||||+||||||||+|+|.|+++|++|+|.+||.++.
T Consensus 468 ~~g~I~~~nvsf~y~~~~~~vL~~isL~I~~Ge~vaIvG~SGsGKSTL~KLL~gly~p~~G~I~~dg~dl~~i~~~~lR~ 547 (709)
T COG2274 468 LQGEIEFENVSFRYGPDDPPVLEDLSLEIPPGEKVAIVGRSGSGKSTLLKLLLGLYKPQQGRILLDGVDLNDIDLASLRR 547 (709)
T ss_pred cCceEEEEEEEEEeCCCCcchhhceeEEeCCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEeHHhcCHHHHHh
Confidence 34459999999999754 6999999999999999999999999999999999999999999999998763
Q ss_pred -eeeecccchhhcCCCccHHHHHHHHhccccHHHHHHHHhhcCCCcc----------cccccCCCCCHHHHHHHHHHHHh
Q 005532 490 -PNYFEQNQAEALDLDKTVLETVAEAAEDWRIDDIKGLLGRCNFKAD----------MLDRKVSLLSGGEKARLAFCKFM 558 (692)
Q Consensus 490 -~~~~~q~~~~~l~~~~tv~e~~~~~~~~~~~~~~~~~L~~~~l~~~----------~~~~~~~~LSgGqkqrv~LAral 558 (692)
.+|+.|+. ..++.|+.||+.......+.+++.+.+...|..+. ........||||||||++|||||
T Consensus 548 ~ig~V~Q~~---~Lf~gSI~eNi~l~~p~~~~e~i~~A~~~ag~~~fI~~lP~gy~t~v~E~G~~LSGGQrQrlalARaL 624 (709)
T COG2274 548 QVGYVLQDP---FLFSGSIRENIALGNPEATDEEIIEAAQLAGAHEFIENLPMGYDTPVGEGGANLSGGQRQRLALARAL 624 (709)
T ss_pred heeEEcccc---hhhcCcHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHHhcccccccccccCCCCCCHHHHHHHHHHHHh
Confidence 46777653 44688999999988776666666666665554321 12334568999999999999999
Q ss_pred ccCCcEEEEeCCCCCCCHHHHHHHHHHHHhcC--ceEEEEecCHHHHHhhccEEEEEECCEEEEecCChhHHHHH
Q 005532 559 VKPSTLLVLDEPTNHLDIPSKEMLEEAISEYK--GTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYYLEK 631 (692)
Q Consensus 559 ~~~p~lLlLDEPTn~LD~~~~~~l~~~l~~~~--~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~~~~~~ 631 (692)
+++|+|||||||||+||+++.+.+.+.|.++. .|+|+|||++..+.. ||||++|++|++++ .|+.++.+..
T Consensus 625 l~~P~ILlLDEaTSaLD~~sE~~I~~~L~~~~~~~T~I~IaHRl~ti~~-adrIiVl~~Gkiv~-~gs~~ell~~ 697 (709)
T COG2274 625 LSKPKILLLDEATSALDPETEAIILQNLLQILQGRTVIIIAHRLSTIRS-ADRIIVLDQGKIVE-QGSHEELLAQ 697 (709)
T ss_pred ccCCCEEEEeCcccccCHhHHHHHHHHHHHHhcCCeEEEEEccchHhhh-ccEEEEccCCceec-cCCHHHHHHh
Confidence 99999999999999999999999999999885 699999999999987 99999999999985 5887777653
No 449
>PRK15134 microcin C ABC transporter ATP-binding protein YejF; Provisional
Probab=100.00 E-value=3.8e-38 Score=359.71 Aligned_cols=211 Identities=22% Similarity=0.397 Sum_probs=173.3
Q ss_pred CCcEEEEeEEEEeC-----------CeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC---
Q 005532 95 SSGVKLENISKSYK-----------GVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN--- 160 (692)
Q Consensus 95 ~~~l~i~~ls~~y~-----------~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~--- 160 (692)
.++|+++|++++|+ ++++|+++||+|++|++++|+||||||||||+++|+|+++ ++|+|.++|.+
T Consensus 273 ~~~l~~~~l~~~~~~~~~~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLlk~l~Gl~~-~~G~i~~~g~~i~~ 351 (529)
T PRK15134 273 SPLLDVEQLQVAFPIRKGILKRTVDHNVVVKNISFTLRPGETLGLVGESGSGKSTTGLALLRLIN-SQGEIWFDGQPLHN 351 (529)
T ss_pred CCcccccCcEEEeecCccccccccccceeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhCcCC-CCcEEEECCEEccc
Confidence 34699999999995 3579999999999999999999999999999999999995 89999998731
Q ss_pred ----------ceEEEEcccCc--cCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHh
Q 005532 161 ----------MKIAFLSQEFE--VSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQ 228 (692)
Q Consensus 161 ----------~~i~~v~Q~~~--~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (692)
..|+|++|++. +++..||.+|+...+.. .. .
T Consensus 352 ~~~~~~~~~~~~i~~v~q~~~~~l~~~~tv~e~l~~~~~~---------------~~----------------------~ 394 (529)
T PRK15134 352 LNRRQLLPVRHRIQVVFQDPNSSLNPRLNVLQIIEEGLRV---------------HQ----------------------P 394 (529)
T ss_pred cchhhHHHhhhceEEEEeCchhhcCCcccHHHHHHHHHHh---------------cc----------------------c
Confidence 25999999973 66678999998532100 00 0
Q ss_pred hcCcccHHHHHHHHhhhcCCCccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc----
Q 005532 229 AVNLDTLDAKVSKLMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK---- 304 (692)
Q Consensus 229 ~~~~~~~~~~i~~ll~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~---- 304 (692)
..+......++.++++.+|+.+...++++.+|||||||||+|||||+.+|+||||||||++||+.+++.+.++|++
T Consensus 395 ~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~ 474 (529)
T PRK15134 395 TLSAAQREQQVIAVMEEVGLDPETRHRYPAEFSGGQRQRIAIARALILKPSLIILDEPTSSLDKTVQAQILALLKSLQQK 474 (529)
T ss_pred cCChHHHHHHHHHHHHHcCCCHHHHhcCCccCCHHHHHHHHHHHHHhCCCCEEEeeCCccccCHHHHHHHHHHHHHHHHh
Confidence 0011112345678889999964457899999999999999999999999999999999999999999999888752
Q ss_pred CCCeEEEEecCHHHHHhhcCeEEEEecceEEEeccChHHH
Q 005532 305 QDVPMVIISHDRAFLDQLCTKIVETEMGVSRTYEGNYSQY 344 (692)
Q Consensus 305 ~~~tvI~vsHd~~~l~~~~d~i~~l~~G~~~~~~G~y~~~ 344 (692)
.++|||+||||++++..+||+|+++++|++. ..|...++
T Consensus 475 ~~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~-~~~~~~~~ 513 (529)
T PRK15134 475 HQLAYLFISHDLHVVRALCHQVIVLRQGEVV-EQGDCERV 513 (529)
T ss_pred hCCEEEEEeCCHHHHHHhcCeEEEEECCEEE-EEcCHHHH
Confidence 4899999999999999999999999999974 55665433
No 450
>cd03214 ABC_Iron-Siderophores_B12_Hemin ABC transporters, involved in the uptake of siderophores, heme, and vitamin B12, are widely conserved in bacteria and archaea. Only very few species lack representatives of the siderophore family transporters. The E. coli BtuCD protein is an ABC transporter mediating vitamin B12 uptake. The two ATP-binding cassettes (BtuD) are in close contact with each other, as are the two membrane-spanning subunits (BtuC); this arrangement is distinct from that observed for the E. coli lipid flippase MsbA. The BtuC subunits provide 20 transmembrane helices grouped around a translocation pathway that is closed to the cytoplasm by a gate region, whereas the dimer arrangement of the BtuD subunits resembles the ATP-bound form of the Rad50 DNA repair enzyme. A prominent cytoplasmic loop of BtuC forms the contact region with the ATP-binding cassette and represent a conserved motif among the ABC transporters.
Probab=100.00 E-value=2.9e-38 Score=310.61 Aligned_cols=174 Identities=34% Similarity=0.576 Sum_probs=147.9
Q ss_pred EEEeEEEEcCCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccceeeeecccchhhcCCCc
Q 005532 426 TIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQNQAEALDLDK 505 (692)
Q Consensus 426 ~~~~l~~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~~~~~~~q~~~~~l~~~~ 505 (692)
+++|+++.|+++.+|+++||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|.++.. .. ..
T Consensus 1 ~~~~l~~~~~~~~~l~~~~~~i~~G~~~~l~G~nGsGKStLl~~i~G~~~~~~G~v~~~g~~~~~--~~--~~------- 69 (180)
T cd03214 1 EVENLSVGYGGRTVLDDLSLSIEAGEIVGILGPNGAGKSTLLKTLAGLLKPSSGEILLDGKDLAS--LS--PK------- 69 (180)
T ss_pred CeeEEEEEECCeeeEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCc--CC--HH-------
Confidence 47899999988889999999999999999999999999999999999999999999998865421 00 00
Q ss_pred cHHHHHHHHhccccHHHHHHHHhhcCCCcccccccCCCCCHHHHHHHHHHHHhccCCcEEEEeCCCCCCCHHHHHHHHHH
Q 005532 506 TVLETVAEAAEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEA 585 (692)
Q Consensus 506 tv~e~~~~~~~~~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~LAral~~~p~lLlLDEPTn~LD~~~~~~l~~~ 585 (692)
.....+. .+..+++.+++. +..++++.+||||||||++|||||+.+|++|||||||++||+.+++.+.+.
T Consensus 70 ~~~~~i~---------~~~q~l~~~gl~-~~~~~~~~~LS~G~~qrl~laral~~~p~llllDEP~~~LD~~~~~~~~~~ 139 (180)
T cd03214 70 ELARKIA---------YVPQALELLGLA-HLADRPFNELSGGERQRVLLARALAQEPPILLLDEPTSHLDIAHQIELLEL 139 (180)
T ss_pred HHHHHHh---------HHHHHHHHcCCH-hHhcCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHH
Confidence 0001111 011178888885 567888999999999999999999999999999999999999999999999
Q ss_pred HHhc----CceEEEEecCHHHHHhhccEEEEEECCEEEE
Q 005532 586 ISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQD 620 (692)
Q Consensus 586 l~~~----~~tviivSHd~~~l~~~~d~i~~l~~g~l~~ 620 (692)
|.++ +.|+|+||||++++.++||++++|++|++..
T Consensus 140 l~~~~~~~~~tiii~sh~~~~~~~~~d~~~~l~~g~i~~ 178 (180)
T cd03214 140 LRRLARERGKTVVMVLHDLNLAARYADRVILLKDGRIVA 178 (180)
T ss_pred HHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEe
Confidence 9865 4599999999999999999999999999863
No 451
>TIGR03796 NHPM_micro_ABC1 NHPM bacteriocin system ABC transporter, peptidase/ATP-binding protein. This protein describes an multidomain ABC transporter subunit that is one of three protein families associated with some regularity with a distinctive family of putative bacteriocins. It includes a bacteriocin-processing peptidase domain at the N-terminus. Model TIGR03793 describes a conserved propeptide region for this bacteriocin family, unusual because it shows obvious homology a region of the enzyme nitrile hydratase up to the classic Gly-Gly cleavage motif. This family is therefore predicted to be a subunit of a bacteriocin processing and export system characteristic to this system that we designate NHPM, Nitrile Hydratase Propeptide Microcin.
Probab=100.00 E-value=4.2e-38 Score=371.62 Aligned_cols=212 Identities=24% Similarity=0.399 Sum_probs=167.9
Q ss_pred CcEEEEeEEEEeCC--eeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC----------ceE
Q 005532 96 SGVKLENISKSYKG--VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN----------MKI 163 (692)
Q Consensus 96 ~~l~i~~ls~~y~~--~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~----------~~i 163 (692)
..|+++|++|+|++ +++|+|+||+|++|++++|||+||||||||+++|+|+++|++|+|.++|.+ ..|
T Consensus 476 ~~I~~~~vsf~y~~~~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~~G~I~idg~~i~~~~~~~lr~~i 555 (710)
T TIGR03796 476 GYVELRNITFGYSPLEPPLIENFSLTLQPGQRVALVGGSGSGKSTIAKLVAGLYQPWSGEILFDGIPREEIPREVLANSV 555 (710)
T ss_pred CeEEEEEEEEecCCCCCCcccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEeHHHCCHHHHHhhe
Confidence 45999999999975 579999999999999999999999999999999999999999999999753 369
Q ss_pred EEEcccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHHh
Q 005532 164 AFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLM 243 (692)
Q Consensus 164 ~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll 243 (692)
+||+|++++ ++.|++|||...-.+ .. .+++.++++.+. +.+.+.++
T Consensus 556 ~~v~Q~~~l-f~gTi~eNi~l~~~~-~~----~~~i~~al~~~~---------------------------l~~~i~~l- 601 (710)
T TIGR03796 556 AMVDQDIFL-FEGTVRDNLTLWDPT-IP----DADLVRACKDAA---------------------------IHDVITSR- 601 (710)
T ss_pred eEEecCChh-hhccHHHHhhCCCCC-CC----HHHHHHHHHHhC---------------------------CHHHHHhC-
Confidence 999999987 578999999632110 00 011111221110 11111111
Q ss_pred hhcCCCccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHccCCCeEEEEecCHHHHHhhc
Q 005532 244 PELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGKQDVPMVIISHDRAFLDQLC 323 (692)
Q Consensus 244 ~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~~~~tvI~vsHd~~~l~~~~ 323 (692)
..|+.+... ....+||||||||++|||||+++|+|||||||||+||+.+.+.+.+.|++.++|+|+|||+++.+.. |
T Consensus 602 -p~gl~t~i~-e~G~~LSGGQrQRiaLARall~~p~iliLDEptS~LD~~te~~i~~~l~~~~~T~IiitHrl~~i~~-~ 678 (710)
T TIGR03796 602 -PGGYDAELA-EGGANLSGGQRQRLEIARALVRNPSILILDEATSALDPETEKIIDDNLRRRGCTCIIVAHRLSTIRD-C 678 (710)
T ss_pred -cCcccceec-cCCCCCCHHHHHHHHHHHHHhhCCCEEEEECccccCCHHHHHHHHHHHHhcCCEEEEEecCHHHHHh-C
Confidence 114443333 3368899999999999999999999999999999999999999999988889999999999999975 9
Q ss_pred CeEEEEecceEEEeccChHHHH
Q 005532 324 TKIVETEMGVSRTYEGNYSQYV 345 (692)
Q Consensus 324 d~i~~l~~G~~~~~~G~y~~~~ 345 (692)
|+|+++++|++. ..|++++.+
T Consensus 679 D~Iivl~~G~i~-~~G~~~~Ll 699 (710)
T TIGR03796 679 DEIIVLERGKVV-QRGTHEELW 699 (710)
T ss_pred CEEEEEeCCEEE-EecCHHHHH
Confidence 999999999984 568776543
No 452
>PRK10762 D-ribose transporter ATP binding protein; Provisional
Probab=100.00 E-value=4.7e-38 Score=356.69 Aligned_cols=201 Identities=24% Similarity=0.354 Sum_probs=173.3
Q ss_pred ceEEEEeEEEEcCCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccce-----------ee
Q 005532 423 SVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL-----------PN 491 (692)
Q Consensus 423 ~~l~~~~l~~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~~-----------~~ 491 (692)
++|+++|++++|+++.+|+++||+|.+|+++||+||||||||||+++|+|+++|++|+|.++|.++. .+
T Consensus 3 ~~i~~~~l~~~~~~~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~i~ 82 (501)
T PRK10762 3 ALLQLKGIDKAFPGVKALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYTRDAGSILYLGKEVTFNGPKSSQEAGIG 82 (501)
T ss_pred ceEEEeeeEEEeCCeEEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHhCCEE
Confidence 4799999999999888999999999999999999999999999999999999999999999886541 35
Q ss_pred eecccchhhcCCCccHHHHHHHHhc------c--cc--HHHHHHHHhhcCCCcccccccCCCCCHHHHHHHHHHHHhccC
Q 005532 492 YFEQNQAEALDLDKTVLETVAEAAE------D--WR--IDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKP 561 (692)
Q Consensus 492 ~~~q~~~~~l~~~~tv~e~~~~~~~------~--~~--~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~LAral~~~ 561 (692)
|++|+. .+.+..|+.+|+..... . +. ...+.++++.+|+. +..++++.+|||||||||+|||||+.+
T Consensus 83 ~v~q~~--~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LSgG~~qrv~la~al~~~ 159 (501)
T PRK10762 83 IIHQEL--NLIPQLTIAENIFLGREFVNRFGRIDWKKMYAEADKLLARLNLR-FSSDKLVGELSIGEQQMVEIAKVLSFE 159 (501)
T ss_pred EEEcch--hccCCCcHHHHhhhccccccccCccCHHHHHHHHHHHHHHcCCC-CCccCchhhCCHHHHHHHHHHHHHhcC
Confidence 666653 46678899999875321 0 11 13467889999995 567899999999999999999999999
Q ss_pred CcEEEEeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhccEEEEEECCEEEEecCChhH
Q 005532 562 STLLVLDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNY 627 (692)
Q Consensus 562 p~lLlLDEPTn~LD~~~~~~l~~~l~~~---~~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~~ 627 (692)
|+||||||||++||+.++.++.+.|+++ +.|||+||||++++..+||+|++|++|++.. .|..++
T Consensus 160 p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvii~sHd~~~~~~~~d~i~~l~~G~i~~-~~~~~~ 227 (501)
T PRK10762 160 SKVIIMDEPTDALTDTETESLFRVIRELKSQGRGIVYISHRLKEIFEICDDVTVFRDGQFIA-EREVAD 227 (501)
T ss_pred CCEEEEeCCcCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEE-ecCcCc
Confidence 9999999999999999999999888764 4599999999999999999999999999974 354443
No 453
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=4.3e-38 Score=367.94 Aligned_cols=245 Identities=24% Similarity=0.403 Sum_probs=188.1
Q ss_pred HHHHhHHHHHHhhhccCccccccccccccCCCCCCCCCCCcEEEEeEEEEeCCee---ceeeeeEEEECCcEEEEEcCCC
Q 005532 57 KSIAKAQSDVESLFSSSADEFENKKYSNKQSNTGASSISSGVKLENISKSYKGVT---VLKDVTWEVKKGEKVGLVGVNG 133 (692)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~ls~~y~~~~---vL~~vsl~i~~Ge~~~lvG~NG 133 (692)
..+.++..+..++|...++.+.....++ .+.......+.|+++||+|+||.+| ||+|+||+|++|+.+|||||+|
T Consensus 949 Pd~~ka~~Aa~~iF~i~dr~~~i~~~~~--~~~~~~~~~G~I~~~~V~F~YPsRP~~~Il~~l~l~i~~GqTvALVG~SG 1026 (1228)
T KOG0055|consen 949 PDISKAKIAAGSIFEILDRKPTIDPDST--SGGKLPNVKGDIEFRNVSFAYPTRPDVPVLNNLSLSIRAGQTVALVGPSG 1026 (1228)
T ss_pred cHHHHHHHHHHHHHHHhcCCCCCCCCCC--CCCccccceeEEEEeeeEeeCCCCCCchhhcCCcEEecCCCEEEEECCCC
Confidence 3466777777778877665543333321 1111123455699999999998765 9999999999999999999999
Q ss_pred ccHHHHHHHHHCCCCCCccEEEECCCCc----------eEEEEcccCccCCCCCHHHHHHhhhHH----HHHHHHHHHHH
Q 005532 134 AGKTTQLRIIAGQEEPDSGNVIKAKSNM----------KIAFLSQEFEVSMSRTVREEFMSAFKE----EMEIAGKLERV 199 (692)
Q Consensus 134 sGKSTLl~~L~G~~~p~~G~I~~~~~~~----------~i~~v~Q~~~~~~~~Tv~e~i~~~~~~----~~~~~~~~~~~ 199 (692)
|||||.+.+|-.+|+|++|.|.++|.+. +||.|+|+|.+ ++.||+|||..+... ++..+.++.++
T Consensus 1027 sGKSTvI~LLeRfYdp~~G~V~IDg~dik~lnl~~LR~~i~lVsQEP~L-F~~TIrENI~YG~~~vs~~eIi~Aak~ANa 1105 (1228)
T KOG0055|consen 1027 SGKSTVISLLERFYDPDAGKVKIDGVDIKDLNLKWLRKQIGLVSQEPVL-FNGTIRENIAYGSEEVSEEEIIEAAKLANA 1105 (1228)
T ss_pred CCHHHHHHHHHHhcCCCCCeEEECCcccccCCHHHHHHhcceeccCchh-hcccHHHHHhccCCCCCHHHHHHHHHHhhh
Confidence 9999999999999999999999998653 59999999987 889999999865211 11111111111
Q ss_pred HHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHHhhhcCCCccccccccccCChHHHHHHHHHHHHccCCC
Q 005532 200 QKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPD 279 (692)
Q Consensus 200 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~ 279 (692)
...+.+.+ -|.++..+++ ..+||||||||+|||||+++||+
T Consensus 1106 H~FI~sLP--------------------------------------~GyDT~vGer-G~QLSGGQKQRIAIARAilRnPk 1146 (1228)
T KOG0055|consen 1106 HNFISSLP--------------------------------------QGYDTRVGER-GVQLSGGQKQRIAIARAILRNPK 1146 (1228)
T ss_pred HHHHhcCc--------------------------------------CcccCccCcc-cCcCCchHHHHHHHHHHHHcCCC
Confidence 11111111 1444444444 78999999999999999999999
Q ss_pred eEEEcCCCCCCCHHHHHHHHHHHcc--CCCeEEEEecCHHHHHhhcCeEEEEecceEEEeccChHHHH
Q 005532 280 LLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVIISHDRAFLDQLCTKIVETEMGVSRTYEGNYSQYV 345 (692)
Q Consensus 280 lLLLDEPts~LD~~~~~~L~~~L~~--~~~tvI~vsHd~~~l~~~~d~i~~l~~G~~~~~~G~y~~~~ 345 (692)
||||||.||+||.++.+.+++.|.+ .|.|.|+|+|++..+.+ ||.|+++++|++ .-.|+.++.+
T Consensus 1147 ILLLDEATSALDseSErvVQeALd~a~~gRT~IvIAHRLSTIqn-aD~I~Vi~~G~V-vE~GtH~~L~ 1212 (1228)
T KOG0055|consen 1147 ILLLDEATSALDSESERVVQEALDRAMEGRTTIVIAHRLSTIQN-ADVIAVLKNGKV-VEQGTHDELL 1212 (1228)
T ss_pred eeeeeccchhhhhhhHHHHHHHHHHhhcCCcEEEEecchhhhhc-CCEEEEEECCEE-EecccHHHHH
Confidence 9999999999999999999999964 68999999999999975 999999999998 4567765543
No 454
>CHL00131 ycf16 sulfate ABC transporter protein; Validated
Probab=100.00 E-value=1.2e-37 Score=322.70 Aligned_cols=201 Identities=28% Similarity=0.396 Sum_probs=166.7
Q ss_pred ceEEEEeEEEEcCCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcC--CCCCeeEEEECCccce-----------
Q 005532 423 SVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGL--EKPRGGEVLLGEHNVL----------- 489 (692)
Q Consensus 423 ~~l~~~~l~~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~--~~p~~G~i~~~~~~~~----------- 489 (692)
++|+++||++.|+++.+|+++||+|++||++||+|+||||||||+++|+|+ ++|++|+|.++|.++.
T Consensus 6 ~~l~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 85 (252)
T CHL00131 6 PILEIKNLHASVNENEILKGLNLSINKGEIHAIMGPNGSGKSTLSKVIAGHPAYKILEGDILFKGESILDLEPEERAHLG 85 (252)
T ss_pred ceEEEEeEEEEeCCEEeeecceeEEcCCcEEEEECCCCCCHHHHHHHHcCCCcCcCCCceEEECCEEcccCChhhhheee
Confidence 469999999999988899999999999999999999999999999999998 5799999999886542
Q ss_pred eeeecccchhhcCCCccHHHHHHHHhc---------ccc----HHHHHHHHhhcCCCcccccccCC-CCCHHHHHHHHHH
Q 005532 490 PNYFEQNQAEALDLDKTVLETVAEAAE---------DWR----IDDIKGLLGRCNFKADMLDRKVS-LLSGGEKARLAFC 555 (692)
Q Consensus 490 ~~~~~q~~~~~l~~~~tv~e~~~~~~~---------~~~----~~~~~~~L~~~~l~~~~~~~~~~-~LSgGqkqrv~LA 555 (692)
.+++.|. ..+.+..++.+++..... ... ...+.++|+.+++.....++++. .|||||||||+||
T Consensus 86 ~~~~~q~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~LSgG~~qrv~la 163 (252)
T CHL00131 86 IFLAFQY--PIEIPGVSNADFLRLAYNSKRKFQGLPELDPLEFLEIINEKLKLVGMDPSFLSRNVNEGFSGGEKKRNEIL 163 (252)
T ss_pred EEEEecc--ccccccccHHHHHHHhhhhhhcccccccccHHHHHHHHHHHHHHcCCchhhhccccccCCCHHHHHHHHHH
Confidence 1233343 334556788888754311 011 13467789999996445677887 5999999999999
Q ss_pred HHhccCCcEEEEeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhh-ccEEEEEECCEEEEecCChh
Q 005532 556 KFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQI-VNRVVEVKGSNLQDYAGDYN 626 (692)
Q Consensus 556 ral~~~p~lLlLDEPTn~LD~~~~~~l~~~l~~~---~~tviivSHd~~~l~~~-~d~i~~l~~g~l~~~~g~~~ 626 (692)
|||+.+|+||||||||++||+.+++.+.+.|+++ +.|||+||||++++..+ ||++++|++|+++. .|+.+
T Consensus 164 ~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~~tH~~~~~~~~~~d~i~~l~~G~i~~-~~~~~ 237 (252)
T CHL00131 164 QMALLDSELAILDETDSGLDIDALKIIAEGINKLMTSENSIILITHYQRLLDYIKPDYVHVMQNGKIIK-TGDAE 237 (252)
T ss_pred HHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhhhCCEEEEEeCCEEEE-ecChh
Confidence 9999999999999999999999999999999865 46999999999999887 89999999999974 45544
No 455
>TIGR02142 modC_ABC molybdenum ABC transporter, ATP-binding protein. This model represents the ATP-binding cassette (ABC) protein of the three subunit molybdate ABC transporter. The three proteins of this complex are homologous to proteins of the sulfate ABC transporter. Molybdenum may be used in nitrogenases of nitrogen-fixing bacteria and in molybdopterin cofactors. In some cases, molybdate may be transported by a sulfate transporter rather than by a specific molybdate transporter.
Probab=100.00 E-value=1e-37 Score=338.05 Aligned_cols=195 Identities=28% Similarity=0.369 Sum_probs=167.1
Q ss_pred eEEEEcCCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccce--------------eeeec
Q 005532 429 NLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL--------------PNYFE 494 (692)
Q Consensus 429 ~l~~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~~--------------~~~~~ 494 (692)
||+++|++..+ ++||+|++||+++|+|||||||||||++|+|+++|++|+|.++|.++. .+|++
T Consensus 4 ~l~~~~~~~~~--~isl~i~~Gei~~l~G~nGsGKSTLl~~iaGl~~p~~G~I~~~g~~i~~~~~~~~~~~~~~~i~~v~ 81 (354)
T TIGR02142 4 RFSKRLGDFSL--DADFTLPGQGVTAIFGRSGSGKTTLIRLIAGLTRPDEGEIVLNGRTLFDSRKGIFLPPEKRRIGYVF 81 (354)
T ss_pred EEEEEECCEEE--EEEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECccCccccccchhhCCeEEEe
Confidence 89999987664 999999999999999999999999999999999999999999886541 24555
Q ss_pred ccchhhcCCCccHHHHHHHHhccc----cHHHHHHHHhhcCCCcccccccCCCCCHHHHHHHHHHHHhccCCcEEEEeCC
Q 005532 495 QNQAEALDLDKTVLETVAEAAEDW----RIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEP 570 (692)
Q Consensus 495 q~~~~~l~~~~tv~e~~~~~~~~~----~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~LAral~~~p~lLlLDEP 570 (692)
|+ ..+++..|+.+|+....... ....+.++++.+++. ...++++.+|||||||||+|||||+.+|++||||||
T Consensus 82 q~--~~l~~~~tv~enl~~~~~~~~~~~~~~~~~~~l~~~gL~-~~~~~~~~~LSgGqkqRvalAraL~~~p~lllLDEP 158 (354)
T TIGR02142 82 QE--ARLFPHLSVRGNLRYGMKRARPSERRISFERVIELLGIG-HLLGRLPGRLSGGEKQRVAIGRALLSSPRLLLMDEP 158 (354)
T ss_pred cC--CccCCCCcHHHHHHHHhhccChhHHHHHHHHHHHHcCCh-hHhcCChhhCCHHHHHHHHHHHHHHcCCCEEEEcCC
Confidence 54 35667889999997643211 123478899999995 678999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEECCEEEEecCChhHHH
Q 005532 571 TNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYYL 629 (692)
Q Consensus 571 Tn~LD~~~~~~l~~~l~~~----~~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~~~~ 629 (692)
|++||+.+++.+.+.|+++ +.|||+||||++++..+||+|++|++|++.. .|..++..
T Consensus 159 ts~LD~~~~~~l~~~L~~l~~~~g~tiiivtH~~~~~~~~~d~i~~l~~G~i~~-~g~~~~~~ 220 (354)
T TIGR02142 159 LAALDDPRKYEILPYLERLHAEFGIPILYVSHSLQEVLRLADRVVVLEDGRVAA-AGPIAEVW 220 (354)
T ss_pred CcCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEeCCEEEE-ECCHHHHh
Confidence 9999999999999988764 4699999999999999999999999999974 46655543
No 456
>TIGR02982 heterocyst_DevA ABC exporter ATP-binding subunit, DevA family. Members of this protein family are found mostly in the Cyanobacteria, but also in the Planctomycetes. Cyanobacterial examples are involved in heterocyst formation, by which some fraction of members of the colony undergo a developmental change and become capable of nitrogen fixation. The DevBCA proteins are thought export of either heterocyst-specific glycolipids or an enzyme essential for formation of the laminated layer found in heterocysts.
Probab=100.00 E-value=1.1e-37 Score=316.22 Aligned_cols=191 Identities=30% Similarity=0.445 Sum_probs=164.2
Q ss_pred eEEEEeEEEEcCC----eecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccce----------
Q 005532 424 VVTIKNLEFGYED----RLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL---------- 489 (692)
Q Consensus 424 ~l~~~~l~~~y~~----~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~~---------- 489 (692)
+|+++|+++.|++ +.+|+++||++++|+++||+|+||||||||+++|+|+++|++|+|.++|.++.
T Consensus 1 ~l~~~~l~~~~~~~~~~~~il~~vs~~i~~G~~~~I~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 80 (220)
T TIGR02982 1 VISIRNLNHYYGHGSLRKQVLFDINLEINPGEIVILTGPSGSGKTTLLTLIGGLRSVQEGSLKVLGQELYGASEKELVQL 80 (220)
T ss_pred CEEEEEEEEEccCCCcceeEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEhHhcCHhHHHHH
Confidence 3789999999975 67999999999999999999999999999999999999999999999887542
Q ss_pred ---eeeecccchhhcCCCccHHHHHHHHhc---ccc----HHHHHHHHhhcCCCcccccccCCCCCHHHHHHHHHHHHhc
Q 005532 490 ---PNYFEQNQAEALDLDKTVLETVAEAAE---DWR----IDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMV 559 (692)
Q Consensus 490 ---~~~~~q~~~~~l~~~~tv~e~~~~~~~---~~~----~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~LAral~ 559 (692)
.+|++|++ .+.+..|+.+|+..... ... ...+.++++.+|+. ...++++.+||||||||++|||+|+
T Consensus 81 ~~~i~~~~q~~--~~~~~~t~~~n~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~lS~G~~qrv~laral~ 157 (220)
T TIGR02982 81 RRNIGYIFQAH--NLLGFLTARQNVQMALELQPNLSYQEARERARAMLEAVGLG-DHLDYYPHNLSGGQKQRVAIARALV 157 (220)
T ss_pred HhheEEEcCCh--hhcCCCCHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCCh-hhhhcChhhCCHHHHHHHHHHHHHh
Confidence 34556543 45567899999875432 111 23578899999994 6678899999999999999999999
Q ss_pred cCCcEEEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEECCEE
Q 005532 560 KPSTLLVLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNL 618 (692)
Q Consensus 560 ~~p~lLlLDEPTn~LD~~~~~~l~~~l~~~----~~tviivSHd~~~l~~~~d~i~~l~~g~l 618 (692)
.+|++|||||||++||+.++..+.+.|+++ +.|||+||||++++ ++||+|++|++|++
T Consensus 158 ~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sh~~~~~-~~~d~v~~l~~g~~ 219 (220)
T TIGR02982 158 HRPKLVLADEPTAALDSKSGRDVVELMQKLAREQGCTILIVTHDNRIL-DVADRIVHMEDGKL 219 (220)
T ss_pred cCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHH-hhCCEEEEEECCEE
Confidence 999999999999999999999999988754 46999999999965 68999999999875
No 457
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-37 Score=327.60 Aligned_cols=205 Identities=29% Similarity=0.412 Sum_probs=173.0
Q ss_pred CceEEEEeEEEEcCC--eecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCe---eEEEECCccce-------
Q 005532 422 RSVVTIKNLEFGYED--RLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRG---GEVLLGEHNVL------- 489 (692)
Q Consensus 422 ~~~l~~~~l~~~y~~--~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~---G~i~~~~~~~~------- 489 (692)
+.+|+++|+++.|++ +++|+++||+|++||++||+|+||||||||+++|+|+++|++ |+|.++|.++.
T Consensus 3 ~~~l~i~~l~~~~~~~~~~~l~~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~~~~~~~~~~~ 82 (282)
T PRK13640 3 DNIVEFKHVSFTYPDSKKPALNDISFSIPRGSWTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGITLTAKTVWDI 82 (282)
T ss_pred CceEEEEEEEEEcCCCCccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCEECCcCCHHHH
Confidence 357999999999974 469999999999999999999999999999999999999987 89999987652
Q ss_pred ---eeeecccchhhcCCCccHHHHHHHHhcc--cc----HHHHHHHHhhcCCCcccccccCCCCCHHHHHHHHHHHHhcc
Q 005532 490 ---PNYFEQNQAEALDLDKTVLETVAEAAED--WR----IDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVK 560 (692)
Q Consensus 490 ---~~~~~q~~~~~l~~~~tv~e~~~~~~~~--~~----~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~LAral~~ 560 (692)
.+|++|+.. ...+..|+.+|+...... .. .+.+.++++.+++. +..++++.+|||||+|||+|||||+.
T Consensus 83 ~~~ig~v~q~~~-~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~L~-~~~~~~~~~LS~G~~qrv~laral~~ 160 (282)
T PRK13640 83 REKVGIVFQNPD-NQFVGATVGDDVAFGLENRAVPRPEMIKIVRDVLADVGML-DYIDSEPANLSGGQKQRVAIAGILAV 160 (282)
T ss_pred HhheEEEEECHH-HhhccCCHHHHHHhhHHhCCCCHHHHHHHHHHHHHHCCCh-hHhcCCcccCCHHHHHHHHHHHHHHc
Confidence 356666532 234578999999753221 11 13477889999995 57899999999999999999999999
Q ss_pred CCcEEEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEECCEEEEecCChhHHHH
Q 005532 561 PSTLLVLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYYLE 630 (692)
Q Consensus 561 ~p~lLlLDEPTn~LD~~~~~~l~~~l~~~----~~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~~~~~ 630 (692)
+|+||||||||++||+.++..+.+.|.++ +.|||+||||++++. .||++++|++|++.. .|+.+++..
T Consensus 161 ~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~~~-~~d~i~~l~~G~i~~-~g~~~~~~~ 232 (282)
T PRK13640 161 EPKIIILDESTSMLDPAGKEQILKLIRKLKKKNNLTVISITHDIDEAN-MADQVLVLDDGKLLA-QGSPVEIFS 232 (282)
T ss_pred CCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHH-hCCEEEEEECCEEEE-eCCHHHHhc
Confidence 99999999999999999999999999764 459999999999995 799999999999985 466665543
No 458
>PRK14271 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-37 Score=325.22 Aligned_cols=204 Identities=23% Similarity=0.363 Sum_probs=171.1
Q ss_pred CceEEEEeEEEEcCCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCC-----CeeEEEECCccce-------
Q 005532 422 RSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKP-----RGGEVLLGEHNVL------- 489 (692)
Q Consensus 422 ~~~l~~~~l~~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p-----~~G~i~~~~~~~~------- 489 (692)
.++|+++||+++|+++++|+++||+|++||++||+|+||||||||+++|+|+++| ++|+|.++|.++.
T Consensus 19 ~~~l~i~nl~~~~~~~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~~ 98 (276)
T PRK14271 19 APAMAAVNLTLGFAGKTVLDQVSMGFPARAVTSLMGPTGSGKTTFLRTLNRMNDKVSGYRYSGDVLLGGRSIFNYRDVLE 98 (276)
T ss_pred CcEEEEeeEEEEECCEEEeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcCCCCCCceEEEECCEEccccchhHH
Confidence 4579999999999988999999999999999999999999999999999999985 7999999886541
Q ss_pred ----eeeecccchhhcCCCccHHHHHHHHhcc---ccH----HHHHHHHhhcCCCc---ccccccCCCCCHHHHHHHHHH
Q 005532 490 ----PNYFEQNQAEALDLDKTVLETVAEAAED---WRI----DDIKGLLGRCNFKA---DMLDRKVSLLSGGEKARLAFC 555 (692)
Q Consensus 490 ----~~~~~q~~~~~l~~~~tv~e~~~~~~~~---~~~----~~~~~~L~~~~l~~---~~~~~~~~~LSgGqkqrv~LA 555 (692)
.+|++|.. .+++ .|+.+|+...... ... ..+.++++.+++.. +..++.+.+|||||||||+||
T Consensus 99 ~~~~i~~v~q~~--~l~~-~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~l~~~~~~LSgGq~qrl~LA 175 (276)
T PRK14271 99 FRRRVGMLFQRP--NPFP-MSIMDNVLAGVRAHKLVPRKEFRGVAQARLTEVGLWDAVKDRLSDSPFRLSGGQQQLLCLA 175 (276)
T ss_pred HhhheEEeccCC--ccCC-ccHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCCCchhhhHhhCCcccCCHHHHHHHHHH
Confidence 34666543 3444 7999998754211 111 13456788888853 235778999999999999999
Q ss_pred HHhccCCcEEEEeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhccEEEEEECCEEEEecCChhHHH
Q 005532 556 KFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY--KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYYL 629 (692)
Q Consensus 556 ral~~~p~lLlLDEPTn~LD~~~~~~l~~~l~~~--~~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~~~~ 629 (692)
|+|+.+|+||||||||++||+.+++.+.+.|+++ ..|||+||||++++..+||++++|++|++.. .|..+++.
T Consensus 176 ral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiiivsH~~~~~~~~~dri~~l~~G~i~~-~g~~~~~~ 250 (276)
T PRK14271 176 RTLAVNPEVLLLDEPTSALDPTTTEKIEEFIRSLADRLTVIIVTHNLAQAARISDRAALFFDGRLVE-EGPTEQLF 250 (276)
T ss_pred HHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEE-eCCHHHHH
Confidence 9999999999999999999999999999999876 4699999999999999999999999999985 46666554
No 459
>PRK13546 teichoic acids export protein ATP-binding subunit; Provisional
Probab=100.00 E-value=3e-37 Score=321.04 Aligned_cols=204 Identities=24% Similarity=0.336 Sum_probs=165.1
Q ss_pred EEEEeEEEEeCC--------------------eeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEEC
Q 005532 98 VKLENISKSYKG--------------------VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKA 157 (692)
Q Consensus 98 l~i~~ls~~y~~--------------------~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~ 157 (692)
|+++|+++.|.. .++|+++||+|++|++++|+||||||||||+++|+|+++|++|+|.++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~is~~i~~Ge~~~liG~NGsGKSTLlk~L~Gl~~p~~G~I~~~ 84 (264)
T PRK13546 5 VNIKNVTKEYRIYRTNKERMKDALIPKHKNKTFFALDDISLKAYEGDVIGLVGINGSGKSTLSNIIGGSLSPTVGKVDRN 84 (264)
T ss_pred EEEeeeEEEEEecccchHHHHHHhhhhccCCceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCceEEEEC
Confidence 777777777732 248999999999999999999999999999999999999999999998
Q ss_pred CCCceEEEEcccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHH
Q 005532 158 KSNMKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDA 237 (692)
Q Consensus 158 ~~~~~i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (692)
| .+++++|.+.+....|+.+|+..... ... .+......
T Consensus 85 g---~~~~~~~~~~~~~~~tv~enl~~~~~---------------~~~------------------------~~~~~~~~ 122 (264)
T PRK13546 85 G---EVSVIAISAGLSGQLTGIENIEFKML---------------CMG------------------------FKRKEIKA 122 (264)
T ss_pred C---EEeEEecccCCCCCCcHHHHHHHHHH---------------HcC------------------------CCHHHHHH
Confidence 5 46788888877677899999742110 000 00011122
Q ss_pred HHHHHhhhcCCCccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHc---cCCCeEEEEec
Q 005532 238 KVSKLMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG---KQDVPMVIISH 314 (692)
Q Consensus 238 ~i~~ll~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~---~~~~tvI~vsH 314 (692)
.+..+++.+++. +..++++.+|||||+|||+|||||+.+|+||||||||+|||+.+++.+.+.|. +.++|||+|||
T Consensus 123 ~~~~~l~~~~l~-~~~~~~~~~LS~Gq~qrv~Laral~~~p~iLlLDEPt~gLD~~~~~~l~~~L~~~~~~g~tiIiisH 201 (264)
T PRK13546 123 MTPKIIEFSELG-EFIYQPVKKYSSGMRAKLGFSINITVNPDILVIDEALSVGDQTFAQKCLDKIYEFKEQNKTIFFVSH 201 (264)
T ss_pred HHHHHHHHcCCc-hhhcCCcccCCHHHHHHHHHHHHHhhCCCEEEEeCccccCCHHHHHHHHHHHHHHHHCCCEEEEEcC
Confidence 344556666775 46788899999999999999999999999999999999999999988887764 35899999999
Q ss_pred CHHHHHhhcCeEEEEecceEEEeccChHHHH
Q 005532 315 DRAFLDQLCTKIVETEMGVSRTYEGNYSQYV 345 (692)
Q Consensus 315 d~~~l~~~~d~i~~l~~G~~~~~~G~y~~~~ 345 (692)
+++++..+||+|+++++|++. +.|.++++.
T Consensus 202 ~~~~i~~~~d~i~~l~~G~i~-~~g~~~~~~ 231 (264)
T PRK13546 202 NLGQVRQFCTKIAWIEGGKLK-DYGELDDVL 231 (264)
T ss_pred CHHHHHHHcCEEEEEECCEEE-EeCCHHHHH
Confidence 999999999999999999984 557665543
No 460
>PRK13545 tagH teichoic acids export protein ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-37 Score=341.80 Aligned_cols=206 Identities=22% Similarity=0.292 Sum_probs=167.2
Q ss_pred CcEEEEeEEEEeCC---eeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCCceEEEEcccCcc
Q 005532 96 SGVKLENISKSYKG---VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSNMKIAFLSQEFEV 172 (692)
Q Consensus 96 ~~l~i~~ls~~y~~---~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~~~i~~v~Q~~~~ 172 (692)
++++++|++|.|++ +++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|... ++.+.+.+
T Consensus 20 ~mL~lknL~~~~~~~~~~~IL~nVSfsI~~GEivgIiGpNGSGKSTLLkiLaGLl~P~sGeI~I~G~~~---~i~~~~~l 96 (549)
T PRK13545 20 PFDKLKDLFFRSKDGEYHYALNNISFEVPEGEIVGIIGLNGSGKSTLSNLIAGVTMPNKGTVDIKGSAA---LIAISSGL 96 (549)
T ss_pred ceeEEEEEEEecCCCccceEEeeeEEEEeCCCEEEEEcCCCCCHHHHHHHHhCCCCCCceEEEECCEee---eEEecccc
Confidence 46999999999977 3699999999999999999999999999999999999999999999987543 33334445
Q ss_pred CCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHHhhhcCCCccc
Q 005532 173 SMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFTADD 252 (692)
Q Consensus 173 ~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl~~~~ 252 (692)
.+..|+++|+..... +. ..+.....+++.++++.+|+. +.
T Consensus 97 ~~~lTV~EnL~l~~~---------------~~------------------------~~~~~e~~e~i~elLe~lgL~-~~ 136 (549)
T PRK13545 97 NGQLTGIENIELKGL---------------MM------------------------GLTKEKIKEIIPEIIEFADIG-KF 136 (549)
T ss_pred CCCCcHHHHHHhhhh---------------hc------------------------CCCHHHHHHHHHHHHHHcCCh-hH
Confidence 566799999742100 00 001111233455677888885 56
Q ss_pred cccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHc---cCCCeEEEEecCHHHHHhhcCeEEEE
Q 005532 253 GDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG---KQDVPMVIISHDRAFLDQLCTKIVET 329 (692)
Q Consensus 253 ~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~---~~~~tvI~vsHd~~~l~~~~d~i~~l 329 (692)
.++++.+|||||||||+|||||+.+|+||||||||+|||+.++..+.+.|+ +.++|||+||||++++..+||+|+++
T Consensus 137 ld~~~~~LSGGQrQRVaLArAL~~~P~LLLLDEPTsgLD~~sr~~LlelL~el~~~G~TIIIVSHdl~~i~~l~DrIivL 216 (549)
T PRK13545 137 IYQPVKTYSSGMKSRLGFAISVHINPDILVIDEALSVGDQTFTKKCLDKMNEFKEQGKTIFFISHSLSQVKSFCTKALWL 216 (549)
T ss_pred hhCCcccCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHhCCEEEEE
Confidence 788999999999999999999999999999999999999999999888774 45889999999999999999999999
Q ss_pred ecceEEEeccChHHHH
Q 005532 330 EMGVSRTYEGNYSQYV 345 (692)
Q Consensus 330 ~~G~~~~~~G~y~~~~ 345 (692)
++|++. +.|..++..
T Consensus 217 ~~GkIv-~~G~~~el~ 231 (549)
T PRK13545 217 HYGQVK-EYGDIKEVV 231 (549)
T ss_pred ECCEEE-EECCHHHHH
Confidence 999984 456554443
No 461
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein. Members of this protein family are ABC transporter ATP-binding subunits, part of a three-gene putative bacteriocin transport operon. The other subunits include another ATP-binding subunit (TIGR03796), which has an N-terminal propeptide cleavage domain, and an HlyD homolog (TIGR03794). In a number of genomes, a conserved propeptide sequence with a classic Gly-Gly motif
Probab=100.00 E-value=5.5e-38 Score=369.09 Aligned_cols=211 Identities=24% Similarity=0.424 Sum_probs=167.8
Q ss_pred CcEEEEeEEEEeCC--eeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC----------ceE
Q 005532 96 SGVKLENISKSYKG--VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN----------MKI 163 (692)
Q Consensus 96 ~~l~i~~ls~~y~~--~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~----------~~i 163 (692)
..|+++||+|+|++ +++|+|+||+|++|+++||+|+||||||||+++|+|+++|++|+|.++|.+ ..|
T Consensus 450 ~~I~~~nvsf~Y~~~~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~~G~I~idg~~i~~~~~~~lr~~i 529 (686)
T TIGR03797 450 GAIEVDRVTFRYRPDGPLILDDVSLQIEPGEFVAIVGPSGSGKSTLLRLLLGFETPESGSVFYDGQDLAGLDVQAVRRQL 529 (686)
T ss_pred ceEEEEEEEEEcCCCCccceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEEcCcCCHHHHHhcc
Confidence 35999999999953 579999999999999999999999999999999999999999999999854 259
Q ss_pred EEEcccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHHh
Q 005532 164 AFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLM 243 (692)
Q Consensus 164 ~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll 243 (692)
+||+|++.+ ++.|++|||..+-. .. .+++.++++.+ .+.+.+..+
T Consensus 530 ~~v~Q~~~l-f~gTI~eNi~~~~~--~~----~e~i~~al~~a---------------------------~l~~~i~~l- 574 (686)
T TIGR03797 530 GVVLQNGRL-MSGSIFENIAGGAP--LT----LDEAWEAARMA---------------------------GLAEDIRAM- 574 (686)
T ss_pred EEEccCCcc-CcccHHHHHhcCCC--CC----HHHHHHHHHHc---------------------------CcHHHHHhc-
Confidence 999999987 67899999964311 00 01112222211 111112111
Q ss_pred hhcCCCccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHccCCCeEEEEecCHHHHHhhc
Q 005532 244 PELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGKQDVPMVIISHDRAFLDQLC 323 (692)
Q Consensus 244 ~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~~~~tvI~vsHd~~~l~~~~ 323 (692)
..|+.+..+ ....+||||||||++|||||+++|+|||||||||+||+.+.+.+.+.|++.++|+|+|||+++.+.. |
T Consensus 575 -p~G~dt~ig-e~G~~LSGGQrQRialARAll~~p~iLiLDEpTS~LD~~te~~i~~~L~~~~~T~IiItHr~~~i~~-~ 651 (686)
T TIGR03797 575 -PMGMHTVIS-EGGGTLSGGQRQRLLIARALVRKPRILLFDEATSALDNRTQAIVSESLERLKVTRIVIAHRLSTIRN-A 651 (686)
T ss_pred -ccccccccc-CCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHhCCeEEEEecChHHHHc-C
Confidence 114433332 2367899999999999999999999999999999999999999999998878999999999999975 9
Q ss_pred CeEEEEecceEEEeccChHHHH
Q 005532 324 TKIVETEMGVSRTYEGNYSQYV 345 (692)
Q Consensus 324 d~i~~l~~G~~~~~~G~y~~~~ 345 (692)
|+|+++++|++. ..|++++.+
T Consensus 652 D~Iivl~~G~iv-~~G~~~~Ll 672 (686)
T TIGR03797 652 DRIYVLDAGRVV-QQGTYDELM 672 (686)
T ss_pred CEEEEEECCEEE-EECCHHHHH
Confidence 999999999984 678876543
No 462
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-37 Score=325.90 Aligned_cols=204 Identities=25% Similarity=0.404 Sum_probs=171.3
Q ss_pred CceEEEEeEEEEcCC--eecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccce----------
Q 005532 422 RSVVTIKNLEFGYED--RLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL---------- 489 (692)
Q Consensus 422 ~~~l~~~~l~~~y~~--~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~~---------- 489 (692)
.++|+++|+++.|++ +.+|+++||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++.
T Consensus 5 ~~~l~i~~l~~~~~~~~~~~l~~isl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~ 84 (269)
T PRK13648 5 NSIIVFKNVSFQYQSDASFTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEKVKSGEIFYNNQAITDDNFEKLRKH 84 (269)
T ss_pred CceEEEEEEEEEcCCCCCcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhh
Confidence 346999999999975 45999999999999999999999999999999999999999999999987642
Q ss_pred eeeecccchhhcCCCccHHHHHHHHhcc--cc----HHHHHHHHhhcCCCcccccccCCCCCHHHHHHHHHHHHhccCCc
Q 005532 490 PNYFEQNQAEALDLDKTVLETVAEAAED--WR----IDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPST 563 (692)
Q Consensus 490 ~~~~~q~~~~~l~~~~tv~e~~~~~~~~--~~----~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~LAral~~~p~ 563 (692)
.+|++|+.. .+.+..++.+|+...... .. ...+.++++.+++. +..++++.+|||||||||+|||||+.+|+
T Consensus 85 i~~v~q~~~-~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LS~G~~qrl~laral~~~p~ 162 (269)
T PRK13648 85 IGIVFQNPD-NQFVGSIVKYDVAFGLENHAVPYDEMHRRVSEALKQVDML-ERADYEPNALSGGQKQRVAIAGVLALNPS 162 (269)
T ss_pred eeEEEeChH-HhcccccHHHHHHhhHHhcCCCHHHHHHHHHHHHHHcCCc-hhhhCCcccCCHHHHHHHHHHHHHHcCCC
Confidence 346666532 234567888887653211 11 23467889999995 56788999999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEECCEEEEecCChhHHH
Q 005532 564 LLVLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYYL 629 (692)
Q Consensus 564 lLlLDEPTn~LD~~~~~~l~~~l~~~----~~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~~~~ 629 (692)
||||||||++||+.+++.+.+.|+++ +.|||+||||.+++.. ||+|++|++|++.. .|..+++.
T Consensus 163 lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tiiivtH~~~~~~~-~d~i~~l~~G~i~~-~g~~~~~~ 230 (269)
T PRK13648 163 VIILDEATSMLDPDARQNLLDLVRKVKSEHNITIISITHDLSEAME-ADHVIVMNKGTVYK-EGTPTEIF 230 (269)
T ss_pred EEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCchHHhc-CCEEEEEECCEEEE-ecCHHHHh
Confidence 99999999999999999999999864 4599999999999986 99999999999985 46665543
No 463
>PRK14263 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.1e-37 Score=322.15 Aligned_cols=207 Identities=19% Similarity=0.239 Sum_probs=167.2
Q ss_pred CcEEEEeEEEEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCC-----CccEEEECCCC----------
Q 005532 96 SGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEP-----DSGNVIKAKSN---------- 160 (692)
Q Consensus 96 ~~l~i~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p-----~~G~I~~~~~~---------- 160 (692)
..+.++++++.|++.++|+|+||+|++|++++|+|+||||||||+++|+|+++| ++|+|.++|.+
T Consensus 7 ~~~~~~~~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~~~ 86 (261)
T PRK14263 7 IVMDCKLDKIFYGNFMAVRDSHVPIRKNEITGFIGPSGCGKSTVLRSLNRMNDLVKGFRFEGHVHFLGQDVYGKGVDPVV 86 (261)
T ss_pred ceEEEEeEEEEeCCEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcccccccCCCCceEEEECCEeccccccchHh
Confidence 459999999999988999999999999999999999999999999999999986 79999998742
Q ss_pred --ceEEEEcccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHH
Q 005532 161 --MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAK 238 (692)
Q Consensus 161 --~~i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (692)
..|+|++|++.++ ..|+.||+...... .. .. .....+
T Consensus 87 ~~~~i~~v~q~~~~~-~~tv~enl~~~~~~---------------~~------------------------~~-~~~~~~ 125 (261)
T PRK14263 87 VRRYIGMVFQQPNPF-SMSIFDNVAFGLRL---------------NR------------------------YK-GDLGDR 125 (261)
T ss_pred hhhceEEEecCCccc-cccHHHHHHHHHhh---------------cC------------------------ch-HHHHHH
Confidence 2499999998875 68999998532100 00 00 001223
Q ss_pred HHHHhhhcCCCcc---ccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc--CCCeEEEEe
Q 005532 239 VSKLMPELGFTAD---DGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVIIS 313 (692)
Q Consensus 239 i~~ll~~lgl~~~---~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~--~~~tvI~vs 313 (692)
+.++++.+|+... ..++++.+|||||+||++|||||+.+|++|||||||++||+.++.++.++|++ .+.|||++|
T Consensus 126 ~~~~l~~~~l~~~i~~~~~~~~~~LS~G~~qrv~laral~~~p~llllDEPtsgLD~~~~~~l~~~l~~~~~~~tii~is 205 (261)
T PRK14263 126 VKHALQGAALWDEVKDKLKVSGLSLSGGQQQRLCIARAIATEPEVLLLDEPCSALDPIATRRVEELMVELKKDYTIALVT 205 (261)
T ss_pred HHHHHHHcCCchhhhhhhhCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEe
Confidence 4455666665321 23567889999999999999999999999999999999999999999988754 368999999
Q ss_pred cCHHHHHhhcCeEEEEe--------cceEEEeccChHHH
Q 005532 314 HDRAFLDQLCTKIVETE--------MGVSRTYEGNYSQY 344 (692)
Q Consensus 314 Hd~~~l~~~~d~i~~l~--------~G~~~~~~G~y~~~ 344 (692)
|+++++..+||+|++++ +|++. ..|...++
T Consensus 206 H~~~~i~~~~d~v~~l~~~~~~~~~~G~i~-~~g~~~~~ 243 (261)
T PRK14263 206 HNMQQAIRVADTTAFFSVDISQGTRTGYLV-EMGPTAQI 243 (261)
T ss_pred CCHHHHHHhCCEEEEEecccccccCCceEE-EeCCHHHH
Confidence 99999999999999996 78874 45664443
No 464
>cd03246 ABCC_Protease_Secretion This family represents the ABC component of the protease secretion system PrtD, a 60-kDa integral membrane protein sharing 37% identity with HlyB, the ABC component of the alpha-hemolysin secretion pathway, in the C-terminal domain. They export degradative enzymes by using a type I protein secretion system and lack an N-terminal signal peptide, but contain a C-terminal secretion signal. The Type I secretion apparatus is made up of three components, an ABC transporter, a membrane fusion protein (MFP), and an outer membrane protein (OMP). For the HlyA transporter complex, HlyB (ABC transporter) and HlyD (MFP) reside in the inner membrane of E. coli. The OMP component is TolC, which is thought to interact with the MFP to form a continuous channel across the periplasm from the cytoplasm to the exterior. HlyB belongs to the family of ABC transporters, which are ubiquitous, ATP-dependent transmembrane pumps or channels. The spectrum of transport substra
Probab=100.00 E-value=5.3e-38 Score=306.77 Aligned_cols=157 Identities=30% Similarity=0.542 Sum_probs=139.7
Q ss_pred EEEEeEEEEeCC--eeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC----------ceEEE
Q 005532 98 VKLENISKSYKG--VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN----------MKIAF 165 (692)
Q Consensus 98 l~i~~ls~~y~~--~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~----------~~i~~ 165 (692)
|+++|++++|++ .++|+++||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.. ..++|
T Consensus 1 i~~~~l~~~~~~~~~~~l~~~~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (173)
T cd03246 1 LEVENVSFRYPGAEPPVLRNVSFSIEPGESLAIIGPSGSGKSTLARLILGLLRPTSGRVRLDGADISQWDPNELGDHVGY 80 (173)
T ss_pred CEEEEEEEEcCCCCCcceeeeEEEECCCCEEEEECCCCCCHHHHHHHHHhccCCCCCeEEECCEEcccCCHHHHHhheEE
Confidence 468999999976 469999999999999999999999999999999999999999999998732 35899
Q ss_pred EcccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHHhhh
Q 005532 166 LSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPE 245 (692)
Q Consensus 166 v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~ 245 (692)
++|++.+++ .|+++|
T Consensus 81 ~~q~~~~~~-~tv~~~---------------------------------------------------------------- 95 (173)
T cd03246 81 LPQDDELFS-GSIAEN---------------------------------------------------------------- 95 (173)
T ss_pred ECCCCcccc-CcHHHH----------------------------------------------------------------
Confidence 999986644 365543
Q ss_pred cCCCccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHc---cCCCeEEEEecCHHHHHhh
Q 005532 246 LGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG---KQDVPMVIISHDRAFLDQL 322 (692)
Q Consensus 246 lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~---~~~~tvI~vsHd~~~l~~~ 322 (692)
+ |||||+||++|||||+.+|++|||||||++||+.++.++.++|+ +.+.|||+||||++++. .
T Consensus 96 -----------l--LS~G~~qrv~la~al~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~-~ 161 (173)
T cd03246 96 -----------I--LSGGQRQRLGLARALYGNPRILVLDEPNSHLDVEGERALNQAIAALKAAGATRIVIAHRPETLA-S 161 (173)
T ss_pred -----------C--cCHHHHHHHHHHHHHhcCCCEEEEECCccccCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHH-h
Confidence 0 89999999999999999999999999999999999999988774 35789999999999985 7
Q ss_pred cCeEEEEecce
Q 005532 323 CTKIVETEMGV 333 (692)
Q Consensus 323 ~d~i~~l~~G~ 333 (692)
||+|+++++|+
T Consensus 162 ~d~v~~l~~G~ 172 (173)
T cd03246 162 ADRILVLEDGR 172 (173)
T ss_pred CCEEEEEECCC
Confidence 99999999886
No 465
>PRK14265 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.9e-37 Score=324.84 Aligned_cols=206 Identities=25% Similarity=0.346 Sum_probs=170.2
Q ss_pred CCCceEEEEeEEEEcCCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCC-----CeeEEEECCccce-----
Q 005532 420 SGRSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKP-----RGGEVLLGEHNVL----- 489 (692)
Q Consensus 420 ~~~~~l~~~~l~~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p-----~~G~i~~~~~~~~----- 489 (692)
+..++|+++|+++.|+++.+|+++||+|++||+++|+|+||||||||+++|+|+++| ++|+|.++|.++.
T Consensus 16 ~~~~~l~~~nl~~~~~~~~~l~~vs~~i~~Ge~~~IiG~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~l~~~~~~ 95 (274)
T PRK14265 16 PDHSVFEVEGVKVFYGGFLALVDVHLKIPAKKIIAFIGPSGCGKSTLLRCFNRMNDLIPGAKVEGRLLYRDRNIYDSQIN 95 (274)
T ss_pred CCCceEEEeeEEEEeCCeEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhcccccccCCCcCceEEECCEecccccch
Confidence 345589999999999988899999999999999999999999999999999999863 6999999886541
Q ss_pred -------eeeecccchhhcCCCccHHHHHHHHhcc--c---cHHHHHHHHhhcCCC---cccccccCCCCCHHHHHHHHH
Q 005532 490 -------PNYFEQNQAEALDLDKTVLETVAEAAED--W---RIDDIKGLLGRCNFK---ADMLDRKVSLLSGGEKARLAF 554 (692)
Q Consensus 490 -------~~~~~q~~~~~l~~~~tv~e~~~~~~~~--~---~~~~~~~~L~~~~l~---~~~~~~~~~~LSgGqkqrv~L 554 (692)
.+|++|+. .+.. .|+.+|+...... . ....+...++.+++. .+..++++.+|||||||||+|
T Consensus 96 ~~~~~~~i~~v~q~~--~l~~-~tv~~nl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LSgGq~qrv~L 172 (274)
T PRK14265 96 SVKLRRQVGMVFQRP--NPFP-KSIYENIAFAPRANGYKGNLDELVEDSLRRAAIWEEVKDKLKEKGTALSGGQQQRLCI 172 (274)
T ss_pred hHHHhhcEEEEccCC--cccc-ccHHHHHHhHHHhcCchHHHHHHHHHHHHHcccchhhHHHhcCCcccCCHHHHHHHHH
Confidence 34666653 3333 4999998754211 1 122355667777763 234678899999999999999
Q ss_pred HHHhccCCcEEEEeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhccEEEEEE---------CCEEEEecC
Q 005532 555 CKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY--KGTVITVSHDRYFVKQIVNRVVEVK---------GSNLQDYAG 623 (692)
Q Consensus 555 Aral~~~p~lLlLDEPTn~LD~~~~~~l~~~l~~~--~~tviivSHd~~~l~~~~d~i~~l~---------~g~l~~~~g 623 (692)
||||+.+|+||||||||++||+.+++.+.++|.++ +.|||+||||.+++.++||++++|+ +|+++. .|
T Consensus 173 AraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~~~~~~~~~~G~~~~-~g 251 (274)
T PRK14265 173 ARAIAMKPDVLLMDEPCSALDPISTRQVEELCLELKEQYTIIMVTHNMQQASRVADWTAFFNTEIDEYGKRRGKLVE-FS 251 (274)
T ss_pred HHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEecccccccccCceEEE-eC
Confidence 99999999999999999999999999999999876 3599999999999999999999998 799875 47
Q ss_pred ChhHHH
Q 005532 624 DYNYYL 629 (692)
Q Consensus 624 ~~~~~~ 629 (692)
.-+++.
T Consensus 252 ~~~~~~ 257 (274)
T PRK14265 252 PTEQMF 257 (274)
T ss_pred CHHHHH
Confidence 666654
No 466
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=5.6e-38 Score=343.27 Aligned_cols=207 Identities=29% Similarity=0.433 Sum_probs=161.7
Q ss_pred EEEEeEEEEeCCe-eceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC----------ceEEEE
Q 005532 98 VKLENISKSYKGV-TVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN----------MKIAFL 166 (692)
Q Consensus 98 l~i~~ls~~y~~~-~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~----------~~i~~v 166 (692)
++++|+++.|++. ++++|+||++++|++++|||+||||||||+++|+|+.+|++|+|.++|.+ .+++||
T Consensus 321 i~~~~l~~~y~~g~~~l~~l~~t~~~g~~talvG~SGaGKSTLl~lL~G~~~~~~G~I~vng~~l~~l~~~~~~k~i~~v 400 (559)
T COG4988 321 ISLENLSFRYPDGKPALSDLNLTIKAGQLTALVGASGAGKSTLLNLLLGFLAPTQGEIRVNGIDLRDLSPEAWRKQISWV 400 (559)
T ss_pred eeecceEEecCCCCcccCCceeEecCCcEEEEECCCCCCHHHHHHHHhCcCCCCCceEEECCccccccCHHHHHhHeeee
Confidence 5556999999765 89999999999999999999999999999999999999999999999753 259999
Q ss_pred cccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHHhhh-
Q 005532 167 SQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPE- 245 (692)
Q Consensus 167 ~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~- 245 (692)
+|+|.+ +..|++||+..+-... . -+.+.++++.. -+.+.++.
T Consensus 401 ~Q~p~l-f~gTireNi~l~~~~~-s----~e~i~~al~~a-------------------------------~l~~~v~~p 443 (559)
T COG4988 401 SQNPYL-FAGTIRENILLARPDA-S----DEEIIAALDQA-------------------------------GLLEFVPKP 443 (559)
T ss_pred CCCCcc-ccccHHHHhhccCCcC-C----HHHHHHHHHHh-------------------------------cHHHhhcCC
Confidence 999987 6789999996432110 0 01111111110 01111111
Q ss_pred cCCCccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc--CCCeEEEEecCHHHHHhhc
Q 005532 246 LGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVIISHDRAFLDQLC 323 (692)
Q Consensus 246 lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~--~~~tvI~vsHd~~~l~~~~ 323 (692)
-|+++..+ .....|||||+|||+|||||+.+++++||||||+|||+++.+.+.+.|.+ .++|||+|||+++.+.+ |
T Consensus 444 ~GLdt~ig-e~G~~LSgGQ~QRlaLARAll~~~~l~llDEpTA~LD~etE~~i~~~l~~l~~~ktvl~itHrl~~~~~-~ 521 (559)
T COG4988 444 DGLDTVIG-EGGAGLSGGQAQRLALARALLSPASLLLLDEPTAHLDAETEQIILQALQELAKQKTVLVITHRLEDAAD-A 521 (559)
T ss_pred Ccccchhc-cCCCCCCHHHHHHHHHHHHhcCCCCEEEecCCccCCCHhHHHHHHHHHHHHHhCCeEEEEEcChHHHhc-C
Confidence 24433222 22577999999999999999999999999999999999999999887753 57999999999999976 9
Q ss_pred CeEEEEecceEEEeccChHHH
Q 005532 324 TKIVETEMGVSRTYEGNYSQY 344 (692)
Q Consensus 324 d~i~~l~~G~~~~~~G~y~~~ 344 (692)
|+|+++++|++ .-.|++++.
T Consensus 522 D~I~vld~G~l-~~~g~~~~L 541 (559)
T COG4988 522 DRIVVLDNGRL-VEQGTHEEL 541 (559)
T ss_pred CEEEEecCCce-eccCCHHHH
Confidence 99999999998 456776554
No 467
>KOG0057 consensus Mitochondrial Fe/S cluster exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=5.8e-38 Score=337.92 Aligned_cols=201 Identities=24% Similarity=0.460 Sum_probs=177.3
Q ss_pred eEEEEeEEEEcCCee-cccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccce----------eee
Q 005532 424 VVTIKNLEFGYEDRL-LFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL----------PNY 492 (692)
Q Consensus 424 ~l~~~~l~~~y~~~~-~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~~----------~~~ 492 (692)
.|+++||++.|+++. +|+++||+|++||+|||||+|||||||+||+|.++.+ .+|+|.+||.++. +++
T Consensus 351 ~I~F~dV~f~y~~k~~iL~gvsf~I~kGekVaIvG~nGsGKSTilr~LlrF~d-~sG~I~IdG~dik~~~~~SlR~~Ig~ 429 (591)
T KOG0057|consen 351 SIEFDDVHFSYGPKRKVLKGVSFTIPKGEKVAIVGSNGSGKSTILRLLLRFFD-YSGSILIDGQDIKEVSLESLRQSIGV 429 (591)
T ss_pred cEEEEeeEEEeCCCCceecceeEEecCCCEEEEECCCCCCHHHHHHHHHHHhc-cCCcEEECCeeHhhhChHHhhhheeE
Confidence 499999999999765 9999999999999999999999999999999999999 8999999998863 567
Q ss_pred ecccchhhcCCCccHHHHHHHHhccccHHHHHHHHhhcCCCcc----------cccccCCCCCHHHHHHHHHHHHhccCC
Q 005532 493 FEQNQAEALDLDKTVLETVAEAAEDWRIDDIKGLLGRCNFKAD----------MLDRKVSLLSGGEKARLAFCKFMVKPS 562 (692)
Q Consensus 493 ~~q~~~~~l~~~~tv~e~~~~~~~~~~~~~~~~~L~~~~l~~~----------~~~~~~~~LSgGqkqrv~LAral~~~p 562 (692)
++|+. ..++.|+..|+.........+++.+.++++++.+. ....+...|||||||||+||||++++|
T Consensus 430 VPQd~---~LFndTIl~NI~YGn~sas~eeV~e~~k~a~~hd~i~~l~~GY~T~VGerG~~LSGGekQrvslaRa~lKda 506 (591)
T KOG0057|consen 430 VPQDS---VLFNDTILYNIKYGNPSASDEEVVEACKRAGLHDVISRLPDGYQTLVGERGLMLSGGEKQRVSLARAFLKDA 506 (591)
T ss_pred eCCcc---cccchhHHHHhhcCCCCcCHHHHHHHHHHcCcHHHHHhccccchhhHhhcccccccchHHHHHHHHHHhcCC
Confidence 88753 34689999999988777777888888888887421 123345579999999999999999999
Q ss_pred cEEEEeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhccEEEEEECCEEEEecCChhHHHH
Q 005532 563 TLLVLDEPTNHLDIPSKEMLEEAISEY--KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYYLE 630 (692)
Q Consensus 563 ~lLlLDEPTn~LD~~~~~~l~~~l~~~--~~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~~~~~ 630 (692)
+|+++|||||+||.++.+.|.+.+... ++|+|+|.||++++.+ ||+|+++++|++.++ |+.++.+.
T Consensus 507 ~Il~~DEaTS~LD~~TE~~i~~~i~~~~~~rTvI~IvH~l~ll~~-~DkI~~l~nG~v~e~-gth~ell~ 574 (591)
T KOG0057|consen 507 PILLLDEATSALDSETEREILDMIMDVMSGRTVIMIVHRLDLLKD-FDKIIVLDNGTVKEY-GTHSELLA 574 (591)
T ss_pred CeEEecCcccccchhhHHHHHHHHHHhcCCCeEEEEEecchhHhc-CCEEEEEECCeeEEe-ccHHHHhh
Confidence 999999999999999999999999863 4599999999999988 999999999999976 88887776
No 468
>cd03369 ABCC_NFT1 Domain 2 of NFT1 (New full-length MRP-type transporter 1). NFT1 belongs to the MRP (mulrtidrug resisitance-associated protein) family of ABC transporters. Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=9.8e-38 Score=313.73 Aligned_cols=184 Identities=25% Similarity=0.384 Sum_probs=154.4
Q ss_pred CcEEEEeEEEEeCC--eeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC----------ceE
Q 005532 96 SGVKLENISKSYKG--VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN----------MKI 163 (692)
Q Consensus 96 ~~l~i~~ls~~y~~--~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~----------~~i 163 (692)
..|+++|++++|++ .++|+++||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|.. ..|
T Consensus 5 ~~l~~~~l~~~~~~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i 84 (207)
T cd03369 5 GEIEVENLSVRYAPDLPPVLKNVSFKVKAGEKIGIVGRTGAGKSTLILALFRFLEAEEGKIEIDGIDISTIPLEDLRSSL 84 (207)
T ss_pred CeEEEEEEEEEeCCCCcccccCceEEECCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEhHHCCHHHHHhhE
Confidence 35999999999975 479999999999999999999999999999999999999999999998742 359
Q ss_pred EEEcccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHHh
Q 005532 164 AFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLM 243 (692)
Q Consensus 164 ~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll 243 (692)
+|++|++.++. .|+++|+... .. . . ...+.+.+
T Consensus 85 ~~v~q~~~~~~-~tv~~~l~~~-~~-----------------~--~--------------------------~~~~~~~l 117 (207)
T cd03369 85 TIIPQDPTLFS-GTIRSNLDPF-DE-----------------Y--S--------------------------DEEIYGAL 117 (207)
T ss_pred EEEecCCcccC-ccHHHHhccc-CC-----------------C--C--------------------------HHHHHHHh
Confidence 99999997754 6999997411 00 0 0 00111112
Q ss_pred hhcCCCccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc--CCCeEEEEecCHHHHHh
Q 005532 244 PELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVIISHDRAFLDQ 321 (692)
Q Consensus 244 ~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~--~~~tvI~vsHd~~~l~~ 321 (692)
+ .++++.+|||||+|||+|||||+.+|++|||||||++||+.+++++.++|++ .+.|+|++||+.+++..
T Consensus 118 ~--------~~~~~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~th~~~~~~~ 189 (207)
T cd03369 118 R--------VSEGGLNLSQGQRQLLCLARALLKRPRVLVLDEATASIDYATDALIQKTIREEFTNSTILTIAHRLRTIID 189 (207)
T ss_pred h--------ccCCCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhh
Confidence 1 2456899999999999999999999999999999999999999999888764 37899999999999976
Q ss_pred hcCeEEEEecceEE
Q 005532 322 LCTKIVETEMGVSR 335 (692)
Q Consensus 322 ~~d~i~~l~~G~~~ 335 (692)
||+++++++|++.
T Consensus 190 -~d~v~~l~~g~i~ 202 (207)
T cd03369 190 -YDKILVMDAGEVK 202 (207)
T ss_pred -CCEEEEEECCEEE
Confidence 9999999999874
No 469
>PRK14249 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.9e-37 Score=320.98 Aligned_cols=202 Identities=25% Similarity=0.368 Sum_probs=168.4
Q ss_pred ceEEEEeEEEEcCCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCC-----eeEEEECCccce--------
Q 005532 423 SVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPR-----GGEVLLGEHNVL-------- 489 (692)
Q Consensus 423 ~~l~~~~l~~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~-----~G~i~~~~~~~~-------- 489 (692)
++|+++|+++.|+++.+|+++||+|.+|+++||+|+||||||||+++|+|+++|+ +|+|.++|.++.
T Consensus 3 ~~l~~~~l~~~~~~~~il~~~s~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~~~ 82 (251)
T PRK14249 3 PKIKIRGVNFFYHKHQVLKNINMDFPERQITAIIGPSGCGKSTLLRALNRMNDIVSGARLEGAVLLDNENIYSPNLDVVN 82 (251)
T ss_pred ceEEEEEEEEEECCeeEecceEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCccccCCcccEEEECCEEccccccChHH
Confidence 4699999999999888999999999999999999999999999999999999997 699999886542
Q ss_pred ----eeeecccchhhcCCCccHHHHHHHHhcc---cc----HHHHHHHHhhcCCC---cccccccCCCCCHHHHHHHHHH
Q 005532 490 ----PNYFEQNQAEALDLDKTVLETVAEAAED---WR----IDDIKGLLGRCNFK---ADMLDRKVSLLSGGEKARLAFC 555 (692)
Q Consensus 490 ----~~~~~q~~~~~l~~~~tv~e~~~~~~~~---~~----~~~~~~~L~~~~l~---~~~~~~~~~~LSgGqkqrv~LA 555 (692)
.+|++|+. .+.+ .|+.+|+...... .. ...+..++..+++. ....++++.+|||||||||+||
T Consensus 83 ~~~~i~~v~q~~--~~~~-~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LS~Gq~qrv~la 159 (251)
T PRK14249 83 LRKRVGMVFQQP--NPFP-KSIFDNVAFGPRMLGTTAQSRLDEVVEKSLRQAALWDEVKDNLHKSGLALSGGQQQRLCIA 159 (251)
T ss_pred hhceEEEEecCC--ccCc-CcHHHHHhhHHHhcCCChhhHHHHHHHHHHHHhCCchhhhhHhhCCcccCCHHHHHHHHHH
Confidence 34666653 3444 5999998754211 11 12355567777763 1346789999999999999999
Q ss_pred HHhccCCcEEEEeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhccEEEEEECCEEEEecCChhHH
Q 005532 556 KFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY--KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYY 628 (692)
Q Consensus 556 ral~~~p~lLlLDEPTn~LD~~~~~~l~~~l~~~--~~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~~~ 628 (692)
|||+.+|++|||||||++||+.++.++.++|+++ +.|||+||||++++..+||++++|++|++..+ |..++.
T Consensus 160 ral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tilivsh~~~~~~~~~d~i~~l~~G~i~~~-~~~~~~ 233 (251)
T PRK14249 160 RVLAIEPEVILMDEPCSALDPVSTMRIEELMQELKQNYTIAIVTHNMQQAARASDWTGFLLTGDLVEY-GRTGEI 233 (251)
T ss_pred HHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhCCEEEEEeCCeEEEe-CCHHHH
Confidence 9999999999999999999999999999999876 36999999999999999999999999999854 555444
No 470
>COG1137 YhbG ABC-type (unclassified) transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=6.5e-39 Score=305.54 Aligned_cols=204 Identities=25% Similarity=0.415 Sum_probs=180.3
Q ss_pred ceEEEEeEEEEcCCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccce-----------ee
Q 005532 423 SVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL-----------PN 491 (692)
Q Consensus 423 ~~l~~~~l~~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~~-----------~~ 491 (692)
+.+.++|+.++|+.+.++++|||+|++||+|||.||||+||||.+.++.|+.+|++|+|.+++.++. .+
T Consensus 3 ~~L~a~~l~K~y~kr~Vv~~Vsl~v~~GEiVGLLGPNGAGKTT~Fymi~Glv~~d~G~i~ld~~diT~lPm~~RArlGig 82 (243)
T COG1137 3 STLVAENLAKSYKKRKVVNDVSLEVNSGEIVGLLGPNGAGKTTTFYMIVGLVRPDSGKILLDDEDITKLPMHKRARLGIG 82 (243)
T ss_pred cEEEehhhhHhhCCeeeeeeeeEEEcCCcEEEEECCCCCCceeEEEEEEEEEecCCceEEECCcccccCChHHHhhcCcc
Confidence 4689999999999999999999999999999999999999999999999999999999999998874 36
Q ss_pred eecccchhhcCCCccHHHHHHHHhccc--------cHHHHHHHHhhcCCCcccccccCCCCCHHHHHHHHHHHHhccCCc
Q 005532 492 YFEQNQAEALDLDKTVLETVAEAAEDW--------RIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPST 563 (692)
Q Consensus 492 ~~~q~~~~~l~~~~tv~e~~~~~~~~~--------~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~LAral~~~p~ 563 (692)
|++|.. ..+-.+||.+|+....+.. ...++.++|+.|++ .+..+++..+||||||+|+-|||||+.+|+
T Consensus 83 YLpQE~--SIFr~LtV~dNi~~vlE~~~~d~~~~~~~~~l~~LL~ef~i-~hlr~~~a~sLSGGERRR~EIARaLa~~P~ 159 (243)
T COG1137 83 YLPQEA--SIFRKLTVEDNIMAVLEIREKDLKKAERKEELDALLEEFHI-THLRDSKAYSLSGGERRRVEIARALAANPK 159 (243)
T ss_pred cccccc--hHhhcCcHHHHHHHHHhhhhcchhHHHHHHHHHHHHHHhch-HHHhcCcccccccchHHHHHHHHHHhcCCC
Confidence 777753 5677899999997654311 11236689999999 478899999999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhccEEEEEECCEEEEecCChhHHHH
Q 005532 564 LLVLDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYYLE 630 (692)
Q Consensus 564 lLlLDEPTn~LD~~~~~~l~~~l~~~---~~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~~~~~ 630 (692)
++|||||++|+||-+...+++++..+ +..|+++-|+..+...+|||.++|.+|++. ..|+-++..+
T Consensus 160 fiLLDEPFAGVDPiaV~dIq~iI~~L~~rgiGvLITDHNVREtL~i~dRaYIi~~G~vl-a~G~p~ei~~ 228 (243)
T COG1137 160 FILLDEPFAGVDPIAVIDIQRIIKHLKDRGIGVLITDHNVRETLDICDRAYIISDGKVL-AEGSPEEIVN 228 (243)
T ss_pred EEEecCCccCCCchhHHHHHHHHHHHHhCCceEEEccccHHHHHhhhheEEEEecCeEE-ecCCHHHHhc
Confidence 99999999999999999888887654 459999999999999999999999999998 5688777755
No 471
>cd03215 ABC_Carb_Monos_II This family represents domain II of the carbohydrate uptake proteins that transport only monosaccharides (Monos). The Carb_Monos family is involved in the uptake of monosaccharides, such as pentoses (such as xylose, arabinose, and ribose) and hexoses (such as xylose, arabinose, and ribose), that cannot be broken down to simple sugars by hydrolysis. In members of Carb_Monos family the single hydrophobic gene product forms a homodimer, while the ABC protein represents a fusion of two nucleotide-binding domains. However, it is assumed that two copies of the ABC domains are present in the assembled transporter.
Probab=100.00 E-value=5.6e-38 Score=309.16 Aligned_cols=161 Identities=26% Similarity=0.431 Sum_probs=144.5
Q ss_pred cEEEEeEEEEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC-----------ceEEE
Q 005532 97 GVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN-----------MKIAF 165 (692)
Q Consensus 97 ~l~i~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~-----------~~i~~ 165 (692)
+|+++|++++| +|+++||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|.+ ..++|
T Consensus 4 ~l~~~~l~~~~----~l~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~i~~ 79 (182)
T cd03215 4 VLEVRGLSVKG----AVRDVSFEVRAGEIVGIAGLVGNGQTELAEALFGLRPPASGEITLDGKPVTRRSPRDAIRAGIAY 79 (182)
T ss_pred EEEEeccEEEe----eecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCccCHHHHHhCCeEE
Confidence 59999999999 8999999999999999999999999999999999999999999998732 25999
Q ss_pred EcccC---ccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHH
Q 005532 166 LSQEF---EVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKL 242 (692)
Q Consensus 166 v~Q~~---~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l 242 (692)
++|++ .+++..|++||+...
T Consensus 80 ~~q~~~~~~~~~~~t~~e~l~~~--------------------------------------------------------- 102 (182)
T cd03215 80 VPEDRKREGLVLDLSVAENIALS--------------------------------------------------------- 102 (182)
T ss_pred ecCCcccCcccCCCcHHHHHHHH---------------------------------------------------------
Confidence 99985 356678999886310
Q ss_pred hhhcCCCccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc---CCCeEEEEecCHHHH
Q 005532 243 MPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK---QDVPMVIISHDRAFL 319 (692)
Q Consensus 243 l~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~---~~~tvI~vsHd~~~l 319 (692)
..||||||||++|||||+.+|++|||||||++||+.+++.+.++|++ .+.|+|++||+++++
T Consensus 103 ---------------~~LS~G~~qrl~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~~ 167 (182)
T cd03215 103 ---------------SLLSGGNQQKVVLARWLARDPRVLILDEPTRGVDVGAKAEIYRLIRELADAGKAVLLISSELDEL 167 (182)
T ss_pred ---------------hhcCHHHHHHHHHHHHHccCCCEEEECCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence 00999999999999999999999999999999999999999887753 478999999999999
Q ss_pred HhhcCeEEEEecce
Q 005532 320 DQLCTKIVETEMGV 333 (692)
Q Consensus 320 ~~~~d~i~~l~~G~ 333 (692)
..+||+++++++|+
T Consensus 168 ~~~~d~v~~l~~G~ 181 (182)
T cd03215 168 LGLCDRILVMYEGR 181 (182)
T ss_pred HHhCCEEEEecCCc
Confidence 99999999999886
No 472
>COG4152 ABC-type uncharacterized transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=2.7e-38 Score=309.63 Aligned_cols=203 Identities=25% Similarity=0.389 Sum_probs=181.1
Q ss_pred eEEEEeEEEEcCCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccc------eeeeecccc
Q 005532 424 VVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNV------LPNYFEQNQ 497 (692)
Q Consensus 424 ~l~~~~l~~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~------~~~~~~q~~ 497 (692)
.+++++|+++||++.+++|+||++++|++.|++|+||+||||.+++|.|+++|++|+|.|+|.++ +++|++..
T Consensus 2 ~L~ie~vtK~Fg~k~av~~isf~v~~G~i~GllG~NGAGKTTtfRmILglle~~~G~I~~~g~~~~~~~~~rIGyLPEE- 80 (300)
T COG4152 2 ALEIEGVTKSFGDKKAVDNISFEVPPGEIFGLLGPNGAGKTTTFRMILGLLEPTEGEITWNGGPLSQEIKNRIGYLPEE- 80 (300)
T ss_pred ceEEecchhccCceeeecceeeeecCCeEEEeecCCCCCccchHHHHhccCCccCceEEEcCcchhhhhhhhcccChhh-
Confidence 48999999999999999999999999999999999999999999999999999999999999776 36787754
Q ss_pred hhhcCCCccHHHHHHHHhccc--c----HHHHHHHHhhcCCCcccccccCCCCCHHHHHHHHHHHHhccCCcEEEEeCCC
Q 005532 498 AEALDLDKTVLETVAEAAEDW--R----IDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPT 571 (692)
Q Consensus 498 ~~~l~~~~tv~e~~~~~~~~~--~----~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~LAral~~~p~lLlLDEPT 571 (692)
..+.+.+||.|.+...+... . ..++..||+++++. ....+++.+||-|++|++.|..+++++|++||||||+
T Consensus 81 -RGLy~k~tv~dql~yla~LkGm~~~e~~~~~~~wLer~~i~-~~~~~kIk~LSKGnqQKIQfisaviHePeLlILDEPF 158 (300)
T COG4152 81 -RGLYPKMTVEDQLKYLAELKGMPKAEIQKKLQAWLERLEIV-GKKTKKIKELSKGNQQKIQFISAVIHEPELLILDEPF 158 (300)
T ss_pred -hccCccCcHHHHHHHHHHhcCCcHHHHHHHHHHHHHhcccc-ccccchHHHhhhhhhHHHHHHHHHhcCCCEEEecCCc
Confidence 46889999999987764322 1 23578899999995 5678899999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhccEEEEEECCEEEEecCChhHHHH
Q 005532 572 NHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYYLE 630 (692)
Q Consensus 572 n~LD~~~~~~l~~~l~~~---~~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~~~~~ 630 (692)
|||||.+.+.|.+.+.++ +.|||++||.++-++++||+++.|++|+.+. .|+..+...
T Consensus 159 SGLDPVN~elLk~~I~~lk~~GatIifSsH~Me~vEeLCD~llmL~kG~~V~-~G~v~~ir~ 219 (300)
T COG4152 159 SGLDPVNVELLKDAIFELKEEGATIIFSSHRMEHVEELCDRLLMLKKGQTVL-YGTVEDIRR 219 (300)
T ss_pred cCCChhhHHHHHHHHHHHHhcCCEEEEecchHHHHHHHhhhhheecCCceEE-eccHHHHHH
Confidence 999999999999998765 5699999999999999999999999999885 587766644
No 473
>cd03289 ABCC_CFTR2 The CFTR subfamily domain 2. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=2.5e-37 Score=322.90 Aligned_cols=198 Identities=20% Similarity=0.364 Sum_probs=167.9
Q ss_pred EEEEeEEEEcC--CeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccce----------eee
Q 005532 425 VTIKNLEFGYE--DRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL----------PNY 492 (692)
Q Consensus 425 l~~~~l~~~y~--~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~~----------~~~ 492 (692)
|+++|++++|+ +.++|+++||+|++||++||+|+||||||||+++|+|+++ ++|+|.++|.++. .+|
T Consensus 3 i~~~nls~~~~~~~~~~l~~isl~I~~Ge~~~IvG~nGsGKSTLl~~L~gl~~-~~G~I~i~g~~i~~~~~~~lr~~i~~ 81 (275)
T cd03289 3 MTVKDLTAKYTEGGNAVLENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN-TEGDIQIDGVSWNSVPLQKWRKAFGV 81 (275)
T ss_pred EEEEEEEEEeCCCCCcceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC-CCcEEEECCEEhhhCCHHHHhhhEEE
Confidence 88999999994 4679999999999999999999999999999999999997 7899999997641 356
Q ss_pred ecccchhhcCCCccHHHHHHHHhccccHHHHHHHHhhcCCCcccccccCCC-----------CCHHHHHHHHHHHHhccC
Q 005532 493 FEQNQAEALDLDKTVLETVAEAAEDWRIDDIKGLLGRCNFKADMLDRKVSL-----------LSGGEKARLAFCKFMVKP 561 (692)
Q Consensus 493 ~~q~~~~~l~~~~tv~e~~~~~~~~~~~~~~~~~L~~~~l~~~~~~~~~~~-----------LSgGqkqrv~LAral~~~ 561 (692)
++|+. .++ ..|+.+|+.... .+..+++.++++.+|+. ...++.+.. ||||||||++|||||+.+
T Consensus 82 v~q~~--~lf-~~tv~~nl~~~~-~~~~~~~~~~l~~~gL~-~~~~~~p~~l~~~~~~~g~~LS~G~~qrl~LaRall~~ 156 (275)
T cd03289 82 IPQKV--FIF-SGTFRKNLDPYG-KWSDEEIWKVAEEVGLK-SVIEQFPGQLDFVLVDGGCVLSHGHKQLMCLARSVLSK 156 (275)
T ss_pred ECCCc--ccc-hhhHHHHhhhcc-CCCHHHHHHHHHHcCCH-HHHHhCcccccceecCCCCCCCHHHHHHHHHHHHHhcC
Confidence 66653 344 469999986332 24456778889999985 456666665 999999999999999999
Q ss_pred CcEEEEeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhccEEEEEECCEEEEecCChhHHHH
Q 005532 562 STLLVLDEPTNHLDIPSKEMLEEAISEY--KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYYLE 630 (692)
Q Consensus 562 p~lLlLDEPTn~LD~~~~~~l~~~l~~~--~~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~~~~~ 630 (692)
|+||||||||++||+.++..+.+.|++. +.|||+||||++++.. ||||++|++|+++.+ |..++.+.
T Consensus 157 p~illlDEpts~LD~~~~~~l~~~l~~~~~~~tii~isH~~~~i~~-~dri~vl~~G~i~~~-g~~~~l~~ 225 (275)
T cd03289 157 AKILLLDEPSAHLDPITYQVIRKTLKQAFADCTVILSEHRIEAMLE-CQRFLVIEENKVRQY-DSIQKLLN 225 (275)
T ss_pred CCEEEEECccccCCHHHHHHHHHHHHHhcCCCEEEEEECCHHHHHh-CCEEEEecCCeEeec-CCHHHHhh
Confidence 9999999999999999999999999864 3599999999999976 999999999999865 66555544
No 474
>COG0410 LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.4e-37 Score=305.09 Aligned_cols=205 Identities=29% Similarity=0.452 Sum_probs=176.4
Q ss_pred ceEEEEeEEEEcCCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccce-----------ee
Q 005532 423 SVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL-----------PN 491 (692)
Q Consensus 423 ~~l~~~~l~~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~~-----------~~ 491 (692)
++++++||+..||...+|++|||++++||+++|+|+||+||||||++|+|+.+|.+|+|.++|.++. ..
T Consensus 2 ~mL~v~~l~~~YG~~~~L~gvsl~v~~Geiv~llG~NGaGKTTlLkti~Gl~~~~~G~I~~~G~dit~~p~~~r~r~Gi~ 81 (237)
T COG0410 2 PMLEVENLSAGYGKIQALRGVSLEVERGEIVALLGRNGAGKTTLLKTIMGLVRPRSGRIIFDGEDITGLPPHERARLGIA 81 (237)
T ss_pred CceeEEeEeecccceeEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeeEEECCeecCCCCHHHHHhCCeE
Confidence 5799999999999999999999999999999999999999999999999999999999999998873 24
Q ss_pred eecccchhhcCCCccHHHHHHHHhcccc-----HHHHHHHHhhcCCCcccccccCCCCCHHHHHHHHHHHHhccCCcEEE
Q 005532 492 YFEQNQAEALDLDKTVLETVAEAAEDWR-----IDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLV 566 (692)
Q Consensus 492 ~~~q~~~~~l~~~~tv~e~~~~~~~~~~-----~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~LAral~~~p~lLl 566 (692)
|++|. ..+++.+||.||+........ ...+..+++.|---.+..+++.++|||||||.++|||||+.+|++||
T Consensus 82 ~VPeg--R~iF~~LTVeENL~~g~~~~~~~~~~~~~~e~v~~lFP~Lker~~~~aG~LSGGEQQMLAiaRALm~~PklLL 159 (237)
T COG0410 82 YVPEG--RRIFPRLTVEENLLLGAYARRDKEAQERDLEEVYELFPRLKERRNQRAGTLSGGEQQMLAIARALMSRPKLLL 159 (237)
T ss_pred eCccc--ccchhhCcHHHHHhhhhhcccccccccccHHHHHHHChhHHHHhcCcccCCChHHHHHHHHHHHHhcCCCEEE
Confidence 66664 357899999999986532111 11145566665433466789999999999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHhcC---c-eEEEEecCHHHHHhhccEEEEEECCEEEEecCChhHHHH
Q 005532 567 LDEPTNHLDIPSKEMLEEAISEYK---G-TVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYYLE 630 (692)
Q Consensus 567 LDEPTn~LD~~~~~~l~~~l~~~~---~-tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~~~~~ 630 (692)
|||||.||-|.-.+.|.+.|++.. + ||++|-++..++.+++||.++|++|+++ +.|+-++...
T Consensus 160 LDEPs~GLaP~iv~~I~~~i~~l~~~~g~tIlLVEQn~~~Al~iaDr~yvle~Griv-~~G~~~eL~~ 226 (237)
T COG0410 160 LDEPSEGLAPKIVEEIFEAIKELRKEGGMTILLVEQNARFALEIADRGYVLENGRIV-LSGTAAELLA 226 (237)
T ss_pred ecCCccCcCHHHHHHHHHHHHHHHHcCCcEEEEEeccHHHHHHhhCEEEEEeCCEEE-EecCHHHHhc
Confidence 999999999999999999988653 4 9999999999999999999999999998 6787666544
No 475
>cd03213 ABCG_EPDR ABCG transporters are involved in eye pigment (EP) precursor transport, regulation of lipid-trafficking mechanisms, and pleiotropic drug resistance (DR). DR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. Compared to other members of the ABC transporter subfamilies, the ABCG transporter family is composed of proteins that have an ATP-binding cassette domain at the N-terminus and a TM (transmembrane) domain at the C-terminus.
Probab=100.00 E-value=1e-37 Score=310.48 Aligned_cols=170 Identities=29% Similarity=0.387 Sum_probs=151.2
Q ss_pred cEEEEeEEEEeCC------eeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCC--CCCccEEEECCCC-------c
Q 005532 97 GVKLENISKSYKG------VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQE--EPDSGNVIKAKSN-------M 161 (692)
Q Consensus 97 ~l~i~~ls~~y~~------~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~--~p~~G~I~~~~~~-------~ 161 (692)
.|+++|++|+|++ +++|+|+||+|++|++++|+||||||||||+++|+|++ +|++|+|.++|.. .
T Consensus 3 ~l~~~~ls~~~~~~~~~~~~~~l~~~~~~i~~Ge~~~l~G~nGsGKStLl~~i~Gl~~~~~~~G~i~~~g~~~~~~~~~~ 82 (194)
T cd03213 3 TLSFRNLTVTVKSSPSKSGKQLLKNVSGKAKPGELTAIMGPSGAGKSTLLNALAGRRTGLGVSGEVLINGRPLDKRSFRK 82 (194)
T ss_pred EEEEEeeEEEEecCCCcccccceecceEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCceEEEECCEeCchHhhhh
Confidence 3899999999976 67999999999999999999999999999999999999 9999999998743 3
Q ss_pred eEEEEcccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHH
Q 005532 162 KIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSK 241 (692)
Q Consensus 162 ~i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 241 (692)
.++|++|++.+++..|+.+|+.... .
T Consensus 83 ~i~~~~q~~~~~~~~t~~~~i~~~~------------------------------------------------------~ 108 (194)
T cd03213 83 IIGYVPQDDILHPTLTVRETLMFAA------------------------------------------------------K 108 (194)
T ss_pred eEEEccCcccCCCCCcHHHHHHHHH------------------------------------------------------H
Confidence 5999999998877889999873100 0
Q ss_pred HhhhcCCCccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc---CCCeEEEEecCHH-
Q 005532 242 LMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK---QDVPMVIISHDRA- 317 (692)
Q Consensus 242 ll~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~---~~~tvI~vsHd~~- 317 (692)
..+|||||+||++|||||+.+|++|||||||++||+.+++.+.++|++ .+.|+|++|||++
T Consensus 109 ---------------~~~LS~G~~qrv~laral~~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~ 173 (194)
T cd03213 109 ---------------LRGLSGGERKRVSIALELVSNPSLLFLDEPTSGLDSSSALQVMSLLRRLADTGRTIICSIHQPSS 173 (194)
T ss_pred ---------------hccCCHHHHHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEEecCchH
Confidence 017999999999999999999999999999999999999999887753 4889999999996
Q ss_pred HHHhhcCeEEEEecceEE
Q 005532 318 FLDQLCTKIVETEMGVSR 335 (692)
Q Consensus 318 ~l~~~~d~i~~l~~G~~~ 335 (692)
.+..+||+++++++|++.
T Consensus 174 ~~~~~~d~v~~l~~G~i~ 191 (194)
T cd03213 174 EIFELFDKLLLLSQGRVI 191 (194)
T ss_pred HHHHhcCEEEEEeCCEEE
Confidence 788999999999999874
No 476
>PRK14236 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.4e-37 Score=323.89 Aligned_cols=205 Identities=27% Similarity=0.373 Sum_probs=171.3
Q ss_pred CCceEEEEeEEEEcCCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCC-----CCeeEEEECCccce------
Q 005532 421 GRSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEK-----PRGGEVLLGEHNVL------ 489 (692)
Q Consensus 421 ~~~~l~~~~l~~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~-----p~~G~i~~~~~~~~------ 489 (692)
..++|+++|+++.|+++.+|+++||+|++||++||+|+||||||||+++|+|+++ |++|+|.++|.++.
T Consensus 22 ~~~~l~~~nl~~~~~~~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~laGl~~~~~~~~~~G~i~i~g~~i~~~~~~~ 101 (272)
T PRK14236 22 EQTALEVRNLNLFYGDKQALFDISMRIPKNRVTAFIGPSGCGKSTLLRCFNRMNDLVDNCRIEGEIRLDGQNIYDKKVDV 101 (272)
T ss_pred CCcEEEEEEEEEEECCeeEeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHhcCCCccCCCCceEEEECCEECcccccCH
Confidence 3457999999999998889999999999999999999999999999999999987 48999999886542
Q ss_pred ------eeeecccchhhcCCCccHHHHHHHHhc--c-cc----HHHHHHHHhhcCCCc---ccccccCCCCCHHHHHHHH
Q 005532 490 ------PNYFEQNQAEALDLDKTVLETVAEAAE--D-WR----IDDIKGLLGRCNFKA---DMLDRKVSLLSGGEKARLA 553 (692)
Q Consensus 490 ------~~~~~q~~~~~l~~~~tv~e~~~~~~~--~-~~----~~~~~~~L~~~~l~~---~~~~~~~~~LSgGqkqrv~ 553 (692)
.+|++|.. .+.+ .|+.+|+..... . .. ...+.++++.+++.. ...++++.+|||||||||+
T Consensus 102 ~~~~~~i~~v~q~~--~l~~-~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~Gq~qrv~ 178 (272)
T PRK14236 102 AELRRRVGMVFQRP--NPFP-KSIYENVVYGLRLQGINNRRVLDEAVERSLRGAALWDEVKDRLHENAFGLSGGQQQRLV 178 (272)
T ss_pred HHHhccEEEEecCC--ccCc-ccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCChhHHHHhhCCcccCCHHHHHHHH
Confidence 24555542 3444 499999875321 1 11 134667788888742 3467889999999999999
Q ss_pred HHHHhccCCcEEEEeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhccEEEEEECCEEEEecCChhHHH
Q 005532 554 FCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY--KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYYL 629 (692)
Q Consensus 554 LAral~~~p~lLlLDEPTn~LD~~~~~~l~~~l~~~--~~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~~~~ 629 (692)
|||||+.+|+||||||||++||+.++..+.+.|.++ +.|||+||||++++..+||+|++|++|++.. .|..+++.
T Consensus 179 laral~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~i~~-~g~~~~~~ 255 (272)
T PRK14236 179 IARAIAIEPEVLLLDEPTSALDPISTLKIEELITELKSKYTIVIVTHNMQQAARVSDYTAFMYMGKLVE-YGDTDTLF 255 (272)
T ss_pred HHHHHHCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCeEEEEeCCHHHHHhhCCEEEEEECCEEEe-cCCHHHHh
Confidence 999999999999999999999999999999999876 3699999999999999999999999999975 46666654
No 477
>TIGR02770 nickel_nikD nickel import ATP-binding protein NikD. This family represents the NikD subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase. NikD and NikE are homologous.
Probab=100.00 E-value=9.8e-38 Score=318.87 Aligned_cols=193 Identities=21% Similarity=0.323 Sum_probs=157.5
Q ss_pred ceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCC----CccEEEECCCC--------ceEEEEcccCc--cCCCCC
Q 005532 112 VLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEP----DSGNVIKAKSN--------MKIAFLSQEFE--VSMSRT 177 (692)
Q Consensus 112 vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p----~~G~I~~~~~~--------~~i~~v~Q~~~--~~~~~T 177 (692)
+|+|+||+|++|++++|+||||||||||+++|+|+++| ++|+|.++|.+ ..|+|++|++. +.+..|
T Consensus 1 ~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~~~t 80 (230)
T TIGR02770 1 LVQDLNLSLKRGEVLALVGESGSGKSLTCLAILGLLPPGLTQTSGEILLDGRPLLPLSIRGRHIATIMQNPRTAFNPLFT 80 (230)
T ss_pred CccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCccCccccEEEECCEechhhhhhhheeEEEecCchhhcCcccC
Confidence 57899999999999999999999999999999999999 89999998742 36999999985 334578
Q ss_pred HHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHHhhhcCCCc--ccccc
Q 005532 178 VREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFTA--DDGDR 255 (692)
Q Consensus 178 v~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl~~--~~~~~ 255 (692)
+.+|+...... . . ........++.++++.+|+.. ...++
T Consensus 81 ~~~~~~~~~~~--------------~-~------------------------~~~~~~~~~~~~~l~~~~l~~~~~~~~~ 121 (230)
T TIGR02770 81 MGNHAIETLRS--------------L-G------------------------KLSKQARALILEALEAVGLPDPEEVLKK 121 (230)
T ss_pred HHHHHHHHHHH--------------c-C------------------------ccHHHHHHHHHHHHHHcCCCchHHHHhC
Confidence 98887421100 0 0 000112345667888888862 35688
Q ss_pred ccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc----CCCeEEEEecCHHHHHhhcCeEEEEec
Q 005532 256 LVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVIISHDRAFLDQLCTKIVETEM 331 (692)
Q Consensus 256 ~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~----~~~tvI~vsHd~~~l~~~~d~i~~l~~ 331 (692)
++.+|||||||||+|||||+.+|+||||||||++||+.+++.+.++|++ .+.|||++||+++++..+||+|+++++
T Consensus 122 ~~~~LS~G~~qrv~laral~~~p~vllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~ 201 (230)
T TIGR02770 122 YPFQLSGGMLQRVMIALALLLEPPFLIADEPTTDLDVVNQARVLKLLRELRQLFGTGILLITHDLGVVARIADEVAVMDD 201 (230)
T ss_pred ChhhcCHHHHHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 8999999999999999999999999999999999999999998887753 478999999999999999999999999
Q ss_pred ceEEEeccChHHH
Q 005532 332 GVSRTYEGNYSQY 344 (692)
Q Consensus 332 G~~~~~~G~y~~~ 344 (692)
|++. ..|...++
T Consensus 202 G~i~-~~~~~~~~ 213 (230)
T TIGR02770 202 GRIV-ERGTVKEI 213 (230)
T ss_pred CEEE-EeCCHHHH
Confidence 9984 55654443
No 478
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-37 Score=325.33 Aligned_cols=203 Identities=28% Similarity=0.371 Sum_probs=171.7
Q ss_pred eEEEEeEEEEcCC---eecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccce----------e
Q 005532 424 VVTIKNLEFGYED---RLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL----------P 490 (692)
Q Consensus 424 ~l~~~~l~~~y~~---~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~~----------~ 490 (692)
+|+++||++.|++ .++|+++||+|.+||++||+|+||||||||+++|+|+++|++|+|.++|.++. .
T Consensus 4 ~l~~~~l~~~~~~~~~~~~l~~v~l~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~i 83 (277)
T PRK13642 4 ILEVENLVFKYEKESDVNQLNGVSFSITKGEWVSIIGQNGSGKSTTARLIDGLFEEFEGKVKIDGELLTAENVWNLRRKI 83 (277)
T ss_pred eEEEEEEEEEcCCCCcCeeeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCCEEEECCEECCcCCHHHHhcce
Confidence 6999999999974 35999999999999999999999999999999999999999999999986642 3
Q ss_pred eeecccchhhcCCCccHHHHHHHHhc--ccc----HHHHHHHHhhcCCCcccccccCCCCCHHHHHHHHHHHHhccCCcE
Q 005532 491 NYFEQNQAEALDLDKTVLETVAEAAE--DWR----IDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTL 564 (692)
Q Consensus 491 ~~~~q~~~~~l~~~~tv~e~~~~~~~--~~~----~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~LAral~~~p~l 564 (692)
+|++|+.. ...+..|+.+|+..... ... ...+..+++.+++. ...++++.+|||||||||+|||||+.+|+|
T Consensus 84 ~~v~q~~~-~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LS~G~~qrv~lAraL~~~p~l 161 (277)
T PRK13642 84 GMVFQNPD-NQFVGATVEDDVAFGMENQGIPREEMIKRVDEALLAVNML-DFKTREPARLSGGQKQRVAVAGIIALRPEI 161 (277)
T ss_pred EEEEECHH-HhhccCCHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCH-hHhhCCcccCCHHHHHHHHHHHHHHcCCCE
Confidence 56666532 23456799999975322 111 13467889999994 567899999999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEECCEEEEecCChhHHHH
Q 005532 565 LVLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYYLE 630 (692)
Q Consensus 565 LlLDEPTn~LD~~~~~~l~~~l~~~----~~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~~~~~ 630 (692)
|||||||++||+.+++.+.+.|.++ +.|||+||||++++. .||+|++|++|+++. .|..+++..
T Consensus 162 lllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tiil~sH~~~~~~-~~d~i~~l~~G~i~~-~g~~~~~~~ 229 (277)
T PRK13642 162 IILDESTSMLDPTGRQEIMRVIHEIKEKYQLTVLSITHDLDEAA-SSDRILVMKAGEIIK-EAAPSELFA 229 (277)
T ss_pred EEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHH-hCCEEEEEECCEEEE-eCCHHHHhc
Confidence 9999999999999999999998754 569999999999997 599999999999975 477666643
No 479
>PRK14253 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.2e-37 Score=320.05 Aligned_cols=201 Identities=25% Similarity=0.350 Sum_probs=168.4
Q ss_pred eEEEEeEEEEcCCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCC-----CeeEEEECCccce---------
Q 005532 424 VVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKP-----RGGEVLLGEHNVL--------- 489 (692)
Q Consensus 424 ~l~~~~l~~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p-----~~G~i~~~~~~~~--------- 489 (692)
+|+++|+++.|+++.+|+++||+|++||+++|+|+||||||||+++|+|+++| ++|+|.++|.++.
T Consensus 3 ~l~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~~~~ 82 (249)
T PRK14253 3 KFNIENLDLFYGENQALKSINLPIPARQVTALIGPSGCGKSTLLRCLNRMNDLIEGVKITGKLTMDGEDIYGNIDVADLR 82 (249)
T ss_pred eEEEeccEEEECCeeeeecceEEecCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEEcccccchHHHH
Confidence 58999999999988899999999999999999999999999999999999986 5999999886541
Q ss_pred --eeeecccchhhcCCCccHHHHHHHHhccc---c----HHHHHHHHhhcCCCc---ccccccCCCCCHHHHHHHHHHHH
Q 005532 490 --PNYFEQNQAEALDLDKTVLETVAEAAEDW---R----IDDIKGLLGRCNFKA---DMLDRKVSLLSGGEKARLAFCKF 557 (692)
Q Consensus 490 --~~~~~q~~~~~l~~~~tv~e~~~~~~~~~---~----~~~~~~~L~~~~l~~---~~~~~~~~~LSgGqkqrv~LAra 557 (692)
.+|++|+. .+.+ .|+.+|+....... . ...+.++++.+++.. +..++++.+|||||||||+||||
T Consensus 83 ~~i~~~~q~~--~~~~-~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~LS~G~~qrv~lara 159 (249)
T PRK14253 83 IKVGMVFQKP--NPFP-MSIYENVAYGLRAQGIKDKKVLDEVVERSLRGAALWDEVKDRLKSHAFGLSGGQQQRLCIART 159 (249)
T ss_pred hheeEEecCC--CcCc-ccHHHHHHhHHHhcCCCchHHHHHHHHHHHHHcCCchhhhHHhhcCcccCCHHHHHHHHHHHH
Confidence 34555543 3444 79999987542111 1 123556777777642 34678899999999999999999
Q ss_pred hccCCcEEEEeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhccEEEEEECCEEEEecCChhHH
Q 005532 558 MVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY--KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYY 628 (692)
Q Consensus 558 l~~~p~lLlLDEPTn~LD~~~~~~l~~~l~~~--~~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~~~ 628 (692)
|+.+|+||||||||++||+.++..+.++|+++ +.|||+||||++++..+||++++|++|++.. .|..+++
T Consensus 160 l~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~~d~i~~l~~G~i~~-~g~~~~~ 231 (249)
T PRK14253 160 IAMEPDVILMDEPTSALDPIATHKIEELMEELKKNYTIVIVTHSMQQARRISDRTAFFLMGELVE-HDDTQVI 231 (249)
T ss_pred HHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEecCHHHHHHhCCEEEEEECCEEEE-eCCHHHH
Confidence 99999999999999999999999999999876 3599999999999999999999999999985 4665554
No 480
>PRK14244 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-37 Score=321.44 Aligned_cols=201 Identities=26% Similarity=0.376 Sum_probs=167.8
Q ss_pred EEEEeEEEEcCCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCC-----CCeeEEEECCccce----------
Q 005532 425 VTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEK-----PRGGEVLLGEHNVL---------- 489 (692)
Q Consensus 425 l~~~~l~~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~-----p~~G~i~~~~~~~~---------- 489 (692)
-+++||++.|+++++|+++||+|.+||+++|+|+||||||||+++|+|+.+ |++|+|.++|.++.
T Consensus 6 ~~~~~l~~~~~~~~~l~~is~~i~~Ge~~~I~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~ 85 (251)
T PRK14244 6 ASVKNLNLWYGSKQILFDINLDIYKREVTAFIGPSGCGKSTFLRCFNRMNDFVPNCKVKGELDIDGIDVYSVDTNVVLLR 85 (251)
T ss_pred EEeeeEEEEECCeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCcceEEEECCEehHhcccchHHHh
Confidence 478999999998899999999999999999999999999999999999986 47999999886541
Q ss_pred --eeeecccchhhcCCCccHHHHHHHHhc--cc------cHHHHHHHHhhcCCCc---ccccccCCCCCHHHHHHHHHHH
Q 005532 490 --PNYFEQNQAEALDLDKTVLETVAEAAE--DW------RIDDIKGLLGRCNFKA---DMLDRKVSLLSGGEKARLAFCK 556 (692)
Q Consensus 490 --~~~~~q~~~~~l~~~~tv~e~~~~~~~--~~------~~~~~~~~L~~~~l~~---~~~~~~~~~LSgGqkqrv~LAr 556 (692)
.+|++|+. .+.+ .|+.+|+..... .. ....+.++++.+++.. ...++++.+|||||||||+|||
T Consensus 86 ~~i~~v~q~~--~~~~-~tv~~ni~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~Gq~qrv~lar 162 (251)
T PRK14244 86 AKVGMVFQKP--NPFP-KSIYDNVAYGPKLHGLAKNKKKLDEIVEKSLTSVGLWEELGDRLKDSAFELSGGQQQRLCIAR 162 (251)
T ss_pred hhEEEEecCc--cccc-CCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHcCCCchhhhHhhcChhhCCHHHHHHHHHHH
Confidence 34666653 3444 499999875421 10 1234667899999853 2457789999999999999999
Q ss_pred HhccCCcEEEEeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhccEEEEEECCEEEEecCChhHHH
Q 005532 557 FMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY--KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYYL 629 (692)
Q Consensus 557 al~~~p~lLlLDEPTn~LD~~~~~~l~~~l~~~--~~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~~~~ 629 (692)
+|+.+|+||||||||++||+.+++.+.+.|.++ +.|||+||||.+++..+||+|++|++|++.. .|..+++.
T Consensus 163 al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~-~~~~~~~~ 236 (251)
T PRK14244 163 AIAVKPTMLLMDEPCSALDPVATNVIENLIQELKKNFTIIVVTHSMKQAKKVSDRVAFFQSGRIVE-YNTTQEIF 236 (251)
T ss_pred HHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhcCEEEEEECCEEEE-eCCHHHHh
Confidence 999999999999999999999999999999876 3599999999999999999999999999985 46655543
No 481
>KOG0057 consensus Mitochondrial Fe/S cluster exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=6.4e-38 Score=337.59 Aligned_cols=210 Identities=27% Similarity=0.422 Sum_probs=165.7
Q ss_pred CcEEEEeEEEEeCCee-ceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCCc----------eEE
Q 005532 96 SGVKLENISKSYKGVT-VLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSNM----------KIA 164 (692)
Q Consensus 96 ~~l~i~~ls~~y~~~~-vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~~----------~i~ 164 (692)
..|+++||+|+|++++ +|+++||+|++||.+||||+|||||||++|+|.++++ ++|+|.++|.+. .||
T Consensus 350 ~~I~F~dV~f~y~~k~~iL~gvsf~I~kGekVaIvG~nGsGKSTilr~LlrF~d-~sG~I~IdG~dik~~~~~SlR~~Ig 428 (591)
T KOG0057|consen 350 GSIEFDDVHFSYGPKRKVLKGVSFTIPKGEKVAIVGSNGSGKSTILRLLLRFFD-YSGSILIDGQDIKEVSLESLRQSIG 428 (591)
T ss_pred CcEEEEeeEEEeCCCCceecceeEEecCCCEEEEECCCCCCHHHHHHHHHHHhc-cCCcEEECCeeHhhhChHHhhhhee
Confidence 3499999999998876 9999999999999999999999999999999999999 999999998643 599
Q ss_pred EEcccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHHhh
Q 005532 165 FLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMP 244 (692)
Q Consensus 165 ~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~ 244 (692)
||||+..+ ++.||..||..+-... ..+++.+.++.. .+.+...
T Consensus 429 ~VPQd~~L-FndTIl~NI~YGn~sa-----s~eeV~e~~k~a-------------------------------~~hd~i~ 471 (591)
T KOG0057|consen 429 VVPQDSVL-FNDTILYNIKYGNPSA-----SDEEVVEACKRA-------------------------------GLHDVIS 471 (591)
T ss_pred EeCCcccc-cchhHHHHhhcCCCCc-----CHHHHHHHHHHc-------------------------------CcHHHHH
Confidence 99999776 8889999996432110 001111111110 1112222
Q ss_pred hc--CCCccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc--CCCeEEEEecCHHHHH
Q 005532 245 EL--GFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVIISHDRAFLD 320 (692)
Q Consensus 245 ~l--gl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~--~~~tvI~vsHd~~~l~ 320 (692)
.+ |..+..++ ....|||||||||+||||++++|+|+++|||||+||.++...+.+.+.+ .++|+|+|.|+++.+.
T Consensus 472 ~l~~GY~T~VGe-rG~~LSGGekQrvslaRa~lKda~Il~~DEaTS~LD~~TE~~i~~~i~~~~~~rTvI~IvH~l~ll~ 550 (591)
T KOG0057|consen 472 RLPDGYQTLVGE-RGLMLSGGEKQRVSLARAFLKDAPILLLDEATSALDSETEREILDMIMDVMSGRTVIMIVHRLDLLK 550 (591)
T ss_pred hccccchhhHhh-cccccccchHHHHHHHHHHhcCCCeEEecCcccccchhhHHHHHHHHHHhcCCCeEEEEEecchhHh
Confidence 22 22222222 3688999999999999999999999999999999999999999887754 5899999999999998
Q ss_pred hhcCeEEEEecceEEEeccChHHHHH
Q 005532 321 QLCTKIVETEMGVSRTYEGNYSQYVL 346 (692)
Q Consensus 321 ~~~d~i~~l~~G~~~~~~G~y~~~~~ 346 (692)
+ ||+|+++++|++..+ |+.++.+.
T Consensus 551 ~-~DkI~~l~nG~v~e~-gth~ell~ 574 (591)
T KOG0057|consen 551 D-FDKIIVLDNGTVKEY-GTHSELLA 574 (591)
T ss_pred c-CCEEEEEECCeeEEe-ccHHHHhh
Confidence 6 999999999998655 66555544
No 482
>cd03232 ABC_PDR_domain2 The pleiotropic drug resistance-like (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=9.1e-38 Score=310.29 Aligned_cols=170 Identities=24% Similarity=0.330 Sum_probs=149.9
Q ss_pred cEEEEeEEEEeCC----eeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCC--CCCccEEEECCCC------ceEE
Q 005532 97 GVKLENISKSYKG----VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQE--EPDSGNVIKAKSN------MKIA 164 (692)
Q Consensus 97 ~l~i~~ls~~y~~----~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~--~p~~G~I~~~~~~------~~i~ 164 (692)
.|+++|+++.|++ +++|+++||+|++|++++|+||||||||||+++|+|++ +|++|+|.++|.+ ..++
T Consensus 3 ~l~~~~l~~~~~~~~~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~G~i~~~g~~~~~~~~~~i~ 82 (192)
T cd03232 3 VLTWKNLNYTVPVKGGKRQLLNNISGYVKPGTLTALMGESGAGKTTLLDVLAGRKTAGVITGEILINGRPLDKNFQRSTG 82 (192)
T ss_pred EEEEeeeEEEecCCCCceEeEEccEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCcCCCcceEEEECCEehHHHhhhceE
Confidence 5899999999975 67999999999999999999999999999999999986 4899999998744 3699
Q ss_pred EEcccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHHhh
Q 005532 165 FLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMP 244 (692)
Q Consensus 165 ~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~ 244 (692)
|++|++.+++..|+++|+.... .
T Consensus 83 ~~~q~~~~~~~~tv~~~l~~~~-------------------------------------------------------~-- 105 (192)
T cd03232 83 YVEQQDVHSPNLTVREALRFSA-------------------------------------------------------L-- 105 (192)
T ss_pred EecccCccccCCcHHHHHHHHH-------------------------------------------------------H--
Confidence 9999988877889999974100 0
Q ss_pred hcCCCccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc---CCCeEEEEecCHH-HHH
Q 005532 245 ELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK---QDVPMVIISHDRA-FLD 320 (692)
Q Consensus 245 ~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~---~~~tvI~vsHd~~-~l~ 320 (692)
..+|||||+|||+|||||+.+|++|||||||++||+.+++++.+.|++ .+.|||+|||+++ .+.
T Consensus 106 ------------~~~LSgGe~qrv~la~al~~~p~vlllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiiivtH~~~~~~~ 173 (192)
T cd03232 106 ------------LRGLSVEQRKRLTIGVELAAKPSILFLDEPTSGLDSQAAYNIVRFLKKLADSGQAILCTIHQPSASIF 173 (192)
T ss_pred ------------HhcCCHHHhHHHHHHHHHhcCCcEEEEeCCCcCCCHHHHHHHHHHHHHHHHcCCEEEEEEcCChHHHH
Confidence 007999999999999999999999999999999999999999887753 4899999999998 478
Q ss_pred hhcCeEEEEec-ceEE
Q 005532 321 QLCTKIVETEM-GVSR 335 (692)
Q Consensus 321 ~~~d~i~~l~~-G~~~ 335 (692)
.+||+|+++++ |++.
T Consensus 174 ~~~d~i~~l~~~g~i~ 189 (192)
T cd03232 174 EKFDRLLLLKRGGKTV 189 (192)
T ss_pred hhCCEEEEEcCCCeEE
Confidence 89999999998 8874
No 483
>cd03252 ABCC_Hemolysin The ABC-transporter hemolysin B is a central component of the secretion machinery that translocates the toxin, hemolysin A, in a Sec-independent fashion across both membranes of E. coli. The hemolysin A (HlyA) transport machinery is composed of the ATP-binding cassette (ABC) transporter HlyB located in the inner membrane, hemolysin D (HlyD), also anchored in the inner membrane, and TolC, which resides in the outer membrane. HlyD apparently forms a continuous channel that bridges the entire periplasm, interacting with TolC and HlyB. This arrangement prevents the appearance of periplasmic intermediates of HlyA during substrate transport. Little is known about the molecular details of HlyA transport, but it is evident that ATP-hydrolysis by the ABC-transporter HlyB is a necessary source of energy.
Probab=100.00 E-value=1.4e-37 Score=319.12 Aligned_cols=200 Identities=25% Similarity=0.478 Sum_probs=162.6
Q ss_pred EEEEeEEEEcCC--eecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccce----------eee
Q 005532 425 VTIKNLEFGYED--RLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL----------PNY 492 (692)
Q Consensus 425 l~~~~l~~~y~~--~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~~----------~~~ 492 (692)
|+++|+++.|++ +++|+++||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.++. .+|
T Consensus 1 i~~~~l~~~~~~~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (237)
T cd03252 1 ITFEHVRFRYKPDGPVILDNISLRIKPGEVVGIVGRSGSGKSTLTKLIQRFYVPENGRVLVDGHDLALADPAWLRRQVGV 80 (237)
T ss_pred CEEEEEEEecCCCCccceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCeehHhcCHHHHhhcEEE
Confidence 478999999973 57999999999999999999999999999999999999999999999986541 456
Q ss_pred ecccchhhcCCCccHHHHHHHHhccccHHHH---------HHHHhhc--CCCcccccccCCCCCHHHHHHHHHHHHhccC
Q 005532 493 FEQNQAEALDLDKTVLETVAEAAEDWRIDDI---------KGLLGRC--NFKADMLDRKVSLLSGGEKARLAFCKFMVKP 561 (692)
Q Consensus 493 ~~q~~~~~l~~~~tv~e~~~~~~~~~~~~~~---------~~~L~~~--~l~~~~~~~~~~~LSgGqkqrv~LAral~~~ 561 (692)
++|+. .+ ...|+.+|+...........+ ..++..+ ++. ...++++.+|||||||||+|||||+.+
T Consensus 81 ~~q~~--~~-~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~-~~~~~~~~~LSgG~~qrv~laral~~~ 156 (237)
T cd03252 81 VLQEN--VL-FNRSIRDNIALADPGMSMERVIEAAKLAGAHDFISELPEGYD-TIVGEQGAGLSGGQRQRIAIARALIHN 156 (237)
T ss_pred EcCCc--hh-ccchHHHHhhccCCCCCHHHHHHHHHHcCcHHHHHhCccccc-chhhcCCCcCCHHHHHHHHHHHHHhhC
Confidence 66653 33 356999998753221112122 2334444 332 335678999999999999999999999
Q ss_pred CcEEEEeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhccEEEEEECCEEEEecCChhHHHH
Q 005532 562 STLLVLDEPTNHLDIPSKEMLEEAISEY--KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYYLE 630 (692)
Q Consensus 562 p~lLlLDEPTn~LD~~~~~~l~~~l~~~--~~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~~~~~ 630 (692)
|++|||||||++||+.+++.+.+.|.++ +.|||++|||++++. .||++++|++|++.. .|+.+++..
T Consensus 157 p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~-~~d~v~~l~~G~i~~-~~~~~~~~~ 225 (237)
T cd03252 157 PRILIFDEATSALDYESEHAIMRNMHDICAGRTVIIIAHRLSTVK-NADRIIVMEKGRIVE-QGSHDELLA 225 (237)
T ss_pred CCEEEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHH-hCCEEEEEECCEEEE-EcCHHHHHh
Confidence 9999999999999999999999999876 359999999999996 599999999999984 476665543
No 484
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.2e-37 Score=331.33 Aligned_cols=209 Identities=27% Similarity=0.396 Sum_probs=174.0
Q ss_pred CCCCCceEEEEeEEEEcC--CeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCC-----CCeeEEEECCccce-
Q 005532 418 GRSGRSVVTIKNLEFGYE--DRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEK-----PRGGEVLLGEHNVL- 489 (692)
Q Consensus 418 ~~~~~~~l~~~~l~~~y~--~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~-----p~~G~i~~~~~~~~- 489 (692)
.|+...+|+++|++++|. .+++|+|+||+|++||++||+|+||||||||+++|+|+.+ |++|+|.++|.++.
T Consensus 74 ~~~~~~~i~~~nls~~y~~~~~~~L~~is~~I~~Ge~v~IvG~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~idG~~i~~ 153 (329)
T PRK14257 74 DFNHANVFEIRNFNFWYMNRTKHVLHDLNLDIKRNKVTAFIGPSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFLGTNTRS 153 (329)
T ss_pred CCCcCceEEEEeeEEEecCCCceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccc
Confidence 366677899999999995 3579999999999999999999999999999999999986 57999999988752
Q ss_pred -----------eeeecccchhhcCCCccHHHHHHHHhcc--cc-H----HHHHHHHhhcCCCc---ccccccCCCCCHHH
Q 005532 490 -----------PNYFEQNQAEALDLDKTVLETVAEAAED--WR-I----DDIKGLLGRCNFKA---DMLDRKVSLLSGGE 548 (692)
Q Consensus 490 -----------~~~~~q~~~~~l~~~~tv~e~~~~~~~~--~~-~----~~~~~~L~~~~l~~---~~~~~~~~~LSgGq 548 (692)
.+|++|.+ .+ ...|+.+|+...... .. . ..+..+++.+++.. ...++++.+|||||
T Consensus 154 ~~~~~~~lr~~i~~v~q~~--~~-~~~ti~eNi~~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~l~~~~~~~~~~LSgGq 230 (329)
T PRK14257 154 KKISSLELRTRIGMVFQKP--TP-FEMSIFDNVAYGPRNNGINDRKILEKIVEKSLKSAALWDEVKDDLDKAGNALSGGQ 230 (329)
T ss_pred cccchHhhhccEEEEecCC--cc-CCCcHHHHHHhHHHhcCCChHHHHHHHHHHHHHHcCCcchhhhhhhCCcccCCHHH
Confidence 34566643 33 358999999854211 11 1 12566788887632 24578899999999
Q ss_pred HHHHHHHHHhccCCcEEEEeCCCCCCCHHHHHHHHHHHHhcC--ceEEEEecCHHHHHhhccEEEEEECCEEEEecCChh
Q 005532 549 KARLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEYK--GTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYN 626 (692)
Q Consensus 549 kqrv~LAral~~~p~lLlLDEPTn~LD~~~~~~l~~~l~~~~--~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~ 626 (692)
||||+|||||+.+|+||||||||++||+.+...+.+.|+++. .|||+|||+++++.++||||++|++|++.++ |...
T Consensus 231 kqRl~LARAl~~~p~IlLLDEPts~LD~~~~~~i~~~i~~l~~~~Tii~iTH~l~~i~~~~Driivl~~G~i~e~-g~~~ 309 (329)
T PRK14257 231 QQRLCIARAIALEPEVLLMDEPTSALDPIATAKIEELILELKKKYSIIIVTHSMAQAQRISDETVFFYQGWIEEA-GETK 309 (329)
T ss_pred HHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEe-CCHH
Confidence 999999999999999999999999999999999999998763 6999999999999999999999999999865 7766
Q ss_pred HHHH
Q 005532 627 YYLE 630 (692)
Q Consensus 627 ~~~~ 630 (692)
+...
T Consensus 310 ~l~~ 313 (329)
T PRK14257 310 TIFI 313 (329)
T ss_pred HHhc
Confidence 6543
No 485
>cd03251 ABCC_MsbA MsbA is an essential ABC transporter, closely related to eukaryotic MDR proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.6e-37 Score=317.98 Aligned_cols=199 Identities=26% Similarity=0.456 Sum_probs=163.9
Q ss_pred EEEEeEEEEcCCe--ecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccce----------eee
Q 005532 425 VTIKNLEFGYEDR--LLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL----------PNY 492 (692)
Q Consensus 425 l~~~~l~~~y~~~--~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~~----------~~~ 492 (692)
|+++|+++.|+++ .+|+++||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.++. .+|
T Consensus 1 i~~~~l~~~~~~~~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (234)
T cd03251 1 VEFKNVTFRYPGDGPPVLRDISLDIPAGETVALVGPSGSGKSTLVNLIPRFYDVDSGRILIDGHDVRDYTLASLRRQIGL 80 (234)
T ss_pred CEEEEEEEEeCCCCccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhccccCCCCEEEECCEEhhhCCHHHHHhhEEE
Confidence 4789999999865 7999999999999999999999999999999999999999999999886542 346
Q ss_pred ecccchhhcCCCccHHHHHHHHhccccHHH---------HHHHHhhc--CCCcccccccCCCCCHHHHHHHHHHHHhccC
Q 005532 493 FEQNQAEALDLDKTVLETVAEAAEDWRIDD---------IKGLLGRC--NFKADMLDRKVSLLSGGEKARLAFCKFMVKP 561 (692)
Q Consensus 493 ~~q~~~~~l~~~~tv~e~~~~~~~~~~~~~---------~~~~L~~~--~l~~~~~~~~~~~LSgGqkqrv~LAral~~~ 561 (692)
++|+. .+. ..|+.+|+........... +.++++.+ ++. ...++++.+|||||||||+|||||+.+
T Consensus 81 ~~q~~--~~~-~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~~~~~~~~LS~G~~qrv~la~al~~~ 156 (234)
T cd03251 81 VSQDV--FLF-NDTVAENIAYGRPGATREEVEEAARAANAHEFIMELPEGYD-TVIGERGVKLSGGQRQRIAIARALLKD 156 (234)
T ss_pred eCCCC--eec-cccHHHHhhccCCCCCHHHHHHHHHHcCcHHHHHhcccCcc-eeeccCCCcCCHHHHHHHHHHHHHhcC
Confidence 66553 333 4699999875432222111 23444444 453 346778999999999999999999999
Q ss_pred CcEEEEeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhccEEEEEECCEEEEecCChhHHH
Q 005532 562 STLLVLDEPTNHLDIPSKEMLEEAISEY--KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYYL 629 (692)
Q Consensus 562 p~lLlLDEPTn~LD~~~~~~l~~~l~~~--~~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~~~~ 629 (692)
|++|||||||++||+.+++.+.+.|+++ +.|||+||||++++.. ||++++|++|++.. .|+.+++.
T Consensus 157 p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~-~d~v~~l~~G~i~~-~~~~~~~~ 224 (234)
T cd03251 157 PPILILDEATSALDTESERLVQAALERLMKNRTTFVIAHRLSTIEN-ADRIVVLEDGKIVE-RGTHEELL 224 (234)
T ss_pred CCEEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHhh-CCEEEEecCCeEee-eCCHHHHH
Confidence 9999999999999999999999999876 4599999999999976 99999999999974 57766654
No 486
>PRK09580 sufC cysteine desulfurase ATPase component; Reviewed
Probab=100.00 E-value=2.1e-37 Score=319.88 Aligned_cols=200 Identities=28% Similarity=0.379 Sum_probs=161.1
Q ss_pred eEEEEeEEEEcCCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCC--CCCeeEEEECCccce-----------e
Q 005532 424 VVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLE--KPRGGEVLLGEHNVL-----------P 490 (692)
Q Consensus 424 ~l~~~~l~~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~--~p~~G~i~~~~~~~~-----------~ 490 (692)
+|+++||++.|+++++|+++||+|++|++++|+|+||||||||+++|+|++ +|++|+|.++|.++. .
T Consensus 1 ~i~~~nl~~~~~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~~i 80 (248)
T PRK09580 1 MLSIKDLHVSVEDKAILRGLNLEVRPGEVHAIMGPNGSGKSTLSATLAGREDYEVTGGTVEFKGKDLLELSPEDRAGEGI 80 (248)
T ss_pred CeEEEEEEEEeCCeeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCccCCCCceEEEECCCccccCCHHHHhhcce
Confidence 488999999999888999999999999999999999999999999999995 699999999986541 2
Q ss_pred eeecccchhhcCCCccHHHHHHHHh-------c-----ccc-HHHHHHHHhhcCCCcccccccCC-CCCHHHHHHHHHHH
Q 005532 491 NYFEQNQAEALDLDKTVLETVAEAA-------E-----DWR-IDDIKGLLGRCNFKADMLDRKVS-LLSGGEKARLAFCK 556 (692)
Q Consensus 491 ~~~~q~~~~~l~~~~tv~e~~~~~~-------~-----~~~-~~~~~~~L~~~~l~~~~~~~~~~-~LSgGqkqrv~LAr 556 (692)
+|+.|.. .+.+..+...++.... . .+. ...+..+++.++++....++++. +|||||||||+|||
T Consensus 81 ~~~~q~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~LS~G~~qrv~lar 158 (248)
T PRK09580 81 FMAFQYP--VEIPGVSNQFFLQTALNAVRSYRGQEPLDRFDFQDLMEEKIALLKMPEDLLTRSVNVGFSGGEKKRNDILQ 158 (248)
T ss_pred EEEecCc--hhccchhHHHHHHHhhhhhhcccccccchHHHHHHHHHHHHHHcCCChhhcccCCCCCCCHHHHHHHHHHH
Confidence 3444432 2233334433322110 0 001 12356788888886555677775 79999999999999
Q ss_pred HhccCCcEEEEeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhh-ccEEEEEECCEEEEecCChh
Q 005532 557 FMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQI-VNRVVEVKGSNLQDYAGDYN 626 (692)
Q Consensus 557 al~~~p~lLlLDEPTn~LD~~~~~~l~~~l~~~---~~tviivSHd~~~l~~~-~d~i~~l~~g~l~~~~g~~~ 626 (692)
||+.+|+||||||||++||+.+++.+.+.|+++ ++|||+||||++++..+ ||+|++|++|++. +.|+++
T Consensus 159 al~~~p~illLDEPt~~LD~~~~~~l~~~l~~l~~~~~tiii~sH~~~~~~~~~~d~i~~l~~g~i~-~~g~~~ 231 (248)
T PRK09580 159 MAVLEPELCILDESDSGLDIDALKIVADGVNSLRDGKRSFIIVTHYQRILDYIKPDYVHVLYQGRIV-KSGDFT 231 (248)
T ss_pred HHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhhhCCEEEEEECCeEE-EeCCHH
Confidence 999999999999999999999999999988754 46999999999999987 8999999999997 457766
No 487
>PRK11288 araG L-arabinose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-37 Score=353.31 Aligned_cols=195 Identities=21% Similarity=0.272 Sum_probs=170.9
Q ss_pred ceEEEEeEEEEcCCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccce-----------ee
Q 005532 423 SVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL-----------PN 491 (692)
Q Consensus 423 ~~l~~~~l~~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~~-----------~~ 491 (692)
++|+++|+++.|+++.+|+++||+|++|+++||+|+||||||||+++|+|+++|++|+|.++|.++. .+
T Consensus 3 ~~l~~~~l~~~~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~~i~ 82 (501)
T PRK11288 3 PYLSFDGIGKTFPGVKALDDISFDCRAGQVHALMGENGAGKSTLLKILSGNYQPDAGSILIDGQEMRFASTTAALAAGVA 82 (501)
T ss_pred ceEEEeeeEEEECCEEEEeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCCHHHHHhCCEE
Confidence 4799999999999888999999999999999999999999999999999999999999999886542 35
Q ss_pred eecccchhhcCCCccHHHHHHHHhc----c-cc----HHHHHHHHhhcCCCcccccccCCCCCHHHHHHHHHHHHhccCC
Q 005532 492 YFEQNQAEALDLDKTVLETVAEAAE----D-WR----IDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPS 562 (692)
Q Consensus 492 ~~~q~~~~~l~~~~tv~e~~~~~~~----~-~~----~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~LAral~~~p 562 (692)
|++|+ ..+.+..|+.+|+..... . .. ...+.++++.+++. ...++++.+|||||||||+|||||+.+|
T Consensus 83 ~v~q~--~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LSgGq~qrv~laral~~~p 159 (501)
T PRK11288 83 IIYQE--LHLVPEMTVAENLYLGQLPHKGGIVNRRLLNYEAREQLEHLGVD-IDPDTPLKYLSIGQRQMVEIAKALARNA 159 (501)
T ss_pred EEEec--hhccCCCCHHHHHHhcccccccCCCCHHHHHHHHHHHHHHcCCC-CCcCCchhhCCHHHHHHHHHHHHHHhCC
Confidence 66665 346677899999876321 1 11 23577899999995 5578899999999999999999999999
Q ss_pred cEEEEeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhccEEEEEECCEEEE
Q 005532 563 TLLVLDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKGSNLQD 620 (692)
Q Consensus 563 ~lLlLDEPTn~LD~~~~~~l~~~l~~~---~~tviivSHd~~~l~~~~d~i~~l~~g~l~~ 620 (692)
+||||||||++||+.+++++.+.|+++ +.|||+||||++++..+||+|++|++|++..
T Consensus 160 ~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiiitHd~~~~~~~~d~i~~l~~G~i~~ 220 (501)
T PRK11288 160 RVIAFDEPTSSLSAREIEQLFRVIRELRAEGRVILYVSHRMEEIFALCDAITVFKDGRYVA 220 (501)
T ss_pred CEEEEcCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEe
Confidence 999999999999999999999999865 4699999999999999999999999999874
No 488
>PRK13549 xylose transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-37 Score=353.48 Aligned_cols=202 Identities=23% Similarity=0.293 Sum_probs=174.4
Q ss_pred ceEEEEeEEEEcCCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCC--CeeEEEECCccce-----------
Q 005532 423 SVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKP--RGGEVLLGEHNVL----------- 489 (692)
Q Consensus 423 ~~l~~~~l~~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p--~~G~i~~~~~~~~----------- 489 (692)
++|+++|++++|+++.+|+++||+|++|+++||+||||||||||+++|+|+++| ++|+|.++|.++.
T Consensus 4 ~~l~~~nl~~~~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 83 (506)
T PRK13549 4 YLLEMKNITKTFGGVKALDNVSLKVRAGEIVSLCGENGAGKSTLMKVLSGVYPHGTYEGEIIFEGEELQASNIRDTERAG 83 (506)
T ss_pred ceEEEeeeEEEeCCeEeecceeEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECCCCCHHHHHHCC
Confidence 479999999999988899999999999999999999999999999999999986 8999999886541
Q ss_pred eeeecccchhhcCCCccHHHHHHHHhcc-----cc----HHHHHHHHhhcCCCcccccccCCCCCHHHHHHHHHHHHhcc
Q 005532 490 PNYFEQNQAEALDLDKTVLETVAEAAED-----WR----IDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVK 560 (692)
Q Consensus 490 ~~~~~q~~~~~l~~~~tv~e~~~~~~~~-----~~----~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~LAral~~ 560 (692)
.+|++|+. .+.+..|+.+|+...... .. ...+.++++.+++. ...++++.+|||||||||+|||||+.
T Consensus 84 i~~v~q~~--~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LSgGqkqrv~la~al~~ 160 (506)
T PRK13549 84 IAIIHQEL--ALVKELSVLENIFLGNEITPGGIMDYDAMYLRAQKLLAQLKLD-INPATPVGNLGLGQQQLVEIAKALNK 160 (506)
T ss_pred eEEEEecc--ccCCCCcHHHHhhhcccccccCCcCHHHHHHHHHHHHHHcCCC-CCcccchhhCCHHHHHHHHHHHHHhc
Confidence 35666653 456778999998754211 11 23577899999995 56789999999999999999999999
Q ss_pred CCcEEEEeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhccEEEEEECCEEEEecCChhHH
Q 005532 561 PSTLLVLDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYY 628 (692)
Q Consensus 561 ~p~lLlLDEPTn~LD~~~~~~l~~~l~~~---~~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~~~ 628 (692)
+|+||||||||++||+.++..+.+.|.++ +.|||+||||++++..+||+|++|++|+++. .|+.+++
T Consensus 161 ~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvi~~tH~~~~~~~~~d~v~~l~~G~i~~-~~~~~~~ 230 (506)
T PRK13549 161 QARLLILDEPTASLTESETAVLLDIIRDLKAHGIACIYISHKLNEVKAISDTICVIRDGRHIG-TRPAAGM 230 (506)
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHHHHHHhcCEEEEEECCEEee-ecccccC
Confidence 99999999999999999999999999765 4699999999999999999999999999874 4555444
No 489
>PRK14258 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.8e-37 Score=321.48 Aligned_cols=202 Identities=25% Similarity=0.362 Sum_probs=168.3
Q ss_pred eEEEEeEEEEcCCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCC-----eeEEEECCccce---------
Q 005532 424 VVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPR-----GGEVLLGEHNVL--------- 489 (692)
Q Consensus 424 ~l~~~~l~~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~-----~G~i~~~~~~~~--------- 489 (692)
+|+++|+++.|+++.+|+++||+|++|+++||+|+||||||||+++|+|+++|+ +|+|.++|.++.
T Consensus 7 ~l~~~nl~~~~~~~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~g~i~~~G~i~~~g~~i~~~~~~~~~~ 86 (261)
T PRK14258 7 AIKVNNLSFYYDTQKILEGVSMEIYQSKVTAIIGPSGCGKSTFLKCLNRMNELESEVRVEGRVEFFNQNIYERRVNLNRL 86 (261)
T ss_pred eEEEeeEEEEeCCeeEeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCccccceEEECCEEhhccccchHHh
Confidence 599999999998888999999999999999999999999999999999999985 899999886541
Q ss_pred ---eeeecccchhhcCCCccHHHHHHHHhcc----c--c-HHHHHHHHhhcCCCc---ccccccCCCCCHHHHHHHHHHH
Q 005532 490 ---PNYFEQNQAEALDLDKTVLETVAEAAED----W--R-IDDIKGLLGRCNFKA---DMLDRKVSLLSGGEKARLAFCK 556 (692)
Q Consensus 490 ---~~~~~q~~~~~l~~~~tv~e~~~~~~~~----~--~-~~~~~~~L~~~~l~~---~~~~~~~~~LSgGqkqrv~LAr 556 (692)
.+|++|+. .+.+ .|+.+|+...... . . ...+..+++.+++.. ...++++.+|||||||||+|||
T Consensus 87 ~~~i~~~~q~~--~l~~-~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LSgGq~qrv~lar 163 (261)
T PRK14258 87 RRQVSMVHPKP--NLFP-MSVYDNVAYGVKIVGWRPKLEIDDIVESALKDADLWDEIKHKIHKSALDLSGGQQQRLCIAR 163 (261)
T ss_pred hccEEEEecCC--ccCc-ccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCcchhhhHhcCCcccCCHHHHHHHHHHH
Confidence 23444442 3444 7999998754211 1 1 234667888888732 3467889999999999999999
Q ss_pred HhccCCcEEEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEEC-----CEEEEecCChhH
Q 005532 557 FMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKG-----SNLQDYAGDYNY 627 (692)
Q Consensus 557 al~~~p~lLlLDEPTn~LD~~~~~~l~~~l~~~----~~tviivSHd~~~l~~~~d~i~~l~~-----g~l~~~~g~~~~ 627 (692)
+|+.+|+||||||||++||+.++..+.+.|.++ +.|||+||||++++.++||+|++|++ |+++. .|..++
T Consensus 164 al~~~p~vllLDEP~~~LD~~~~~~l~~~l~~l~~~~~~tiiivsH~~~~i~~~~d~i~~l~~~~~~~G~i~~-~~~~~~ 242 (261)
T PRK14258 164 ALAVKPKVLLMDEPCFGLDPIASMKVESLIQSLRLRSELTMVIVSHNLHQVSRLSDFTAFFKGNENRIGQLVE-FGLTKK 242 (261)
T ss_pred HHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHhcCEEEEEccCCCcCceEEE-eCCHHH
Confidence 999999999999999999999999999998763 56999999999999999999999999 99874 466655
Q ss_pred HH
Q 005532 628 YL 629 (692)
Q Consensus 628 ~~ 629 (692)
..
T Consensus 243 ~~ 244 (261)
T PRK14258 243 IF 244 (261)
T ss_pred HH
Confidence 53
No 490
>PRK10790 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=2e-37 Score=358.75 Aligned_cols=211 Identities=24% Similarity=0.351 Sum_probs=165.6
Q ss_pred CcEEEEeEEEEeCC-eeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC----------ceEE
Q 005532 96 SGVKLENISKSYKG-VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN----------MKIA 164 (692)
Q Consensus 96 ~~l~i~~ls~~y~~-~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~----------~~i~ 164 (692)
..|+++|++|+|++ .++|+|+||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|.+ ..|+
T Consensus 339 ~~i~~~~v~f~y~~~~~il~~i~l~i~~Ge~iaIvG~SGsGKSTLl~lL~gl~~p~~G~I~idg~~i~~~~~~~l~~~i~ 418 (592)
T PRK10790 339 GRIDIDNVSFAYRDDNLVLQNINLSVPSRGFVALVGHTGSGKSTLASLLMGYYPLTEGEIRLDGRPLSSLSHSVLRQGVA 418 (592)
T ss_pred CeEEEEEEEEEeCCCCceeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCceEEECCEEhhhCCHHHHHhheE
Confidence 35999999999975 569999999999999999999999999999999999999999999999853 3599
Q ss_pred EEcccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHHhh
Q 005532 165 FLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMP 244 (692)
Q Consensus 165 ~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~ 244 (692)
|++|+|.+ ++.|+++||..+- + ... +++.++++.+ .+.+.+.++
T Consensus 419 ~v~Q~~~l-F~~Ti~~NI~~~~-~-~~d----~~i~~a~~~~---------------------------gl~~~i~~l-- 462 (592)
T PRK10790 419 MVQQDPVV-LADTFLANVTLGR-D-ISE----EQVWQALETV---------------------------QLAELARSL-- 462 (592)
T ss_pred EEccCCcc-ccchHHHHHHhCC-C-CCH----HHHHHHHHHc---------------------------CcHHHHHhc--
Confidence 99999987 5679999996431 1 000 1111111111 111112221
Q ss_pred hcCCCccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc--CCCeEEEEecCHHHHHhh
Q 005532 245 ELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVIISHDRAFLDQL 322 (692)
Q Consensus 245 ~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~--~~~tvI~vsHd~~~l~~~ 322 (692)
.-|+++... ....+||||||||++|||||+.+|+||||||||++||+++.+.+.+.|++ .++|+|+|||+++.+..
T Consensus 463 p~Gldt~i~-e~g~~LSGGqrQRialARaLl~~~~illlDEpts~LD~~t~~~i~~~l~~~~~~~tvIivtHr~~~l~~- 540 (592)
T PRK10790 463 PDGLYTPLG-EQGNNLSVGQKQLLALARVLVQTPQILILDEATANIDSGTEQAIQQALAAVREHTTLVVIAHRLSTIVE- 540 (592)
T ss_pred ccccccccc-CCCCCCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhCCCEEEEEecchHHHHh-
Confidence 013433222 24678999999999999999999999999999999999999999888764 47999999999988875
Q ss_pred cCeEEEEecceEEEeccChHHHH
Q 005532 323 CTKIVETEMGVSRTYEGNYSQYV 345 (692)
Q Consensus 323 ~d~i~~l~~G~~~~~~G~y~~~~ 345 (692)
||+|+++++|++. ..|++++.+
T Consensus 541 ~D~ii~l~~G~i~-~~G~~~~L~ 562 (592)
T PRK10790 541 ADTILVLHRGQAV-EQGTHQQLL 562 (592)
T ss_pred CCEEEEEECCEEE-EEcCHHHHH
Confidence 9999999999984 568876654
No 491
>cd03214 ABC_Iron-Siderophores_B12_Hemin ABC transporters, involved in the uptake of siderophores, heme, and vitamin B12, are widely conserved in bacteria and archaea. Only very few species lack representatives of the siderophore family transporters. The E. coli BtuCD protein is an ABC transporter mediating vitamin B12 uptake. The two ATP-binding cassettes (BtuD) are in close contact with each other, as are the two membrane-spanning subunits (BtuC); this arrangement is distinct from that observed for the E. coli lipid flippase MsbA. The BtuC subunits provide 20 transmembrane helices grouped around a translocation pathway that is closed to the cytoplasm by a gate region, whereas the dimer arrangement of the BtuD subunits resembles the ATP-bound form of the Rad50 DNA repair enzyme. A prominent cytoplasmic loop of BtuC forms the contact region with the ATP-binding cassette and represent a conserved motif among the ABC transporters.
Probab=100.00 E-value=3.8e-38 Score=309.83 Aligned_cols=173 Identities=31% Similarity=0.514 Sum_probs=142.1
Q ss_pred EEEeEEEEeCCeeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCCceEEEEcccCccCCCCCH
Q 005532 99 KLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSNMKIAFLSQEFEVSMSRTV 178 (692)
Q Consensus 99 ~i~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~~~i~~v~Q~~~~~~~~Tv 178 (692)
+++|++++|+++++|+++||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|.+. .+. .....
T Consensus 1 ~~~~l~~~~~~~~~l~~~~~~i~~G~~~~l~G~nGsGKStLl~~i~G~~~~~~G~v~~~g~~~-----~~~----~~~~~ 71 (180)
T cd03214 1 EVENLSVGYGGRTVLDDLSLSIEAGEIVGILGPNGAGKSTLLKTLAGLLKPSSGEILLDGKDL-----ASL----SPKEL 71 (180)
T ss_pred CeeEEEEEECCeeeEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEC-----CcC----CHHHH
Confidence 368999999888899999999999999999999999999999999999999999999885321 000 00000
Q ss_pred HHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHHhhhcCCCccccccccc
Q 005532 179 REEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFTADDGDRLVA 258 (692)
Q Consensus 179 ~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl~~~~~~~~~~ 258 (692)
+..+.. +.++++.+|+. +..++.+.
T Consensus 72 ~~~i~~------------------------------------------------------~~q~l~~~gl~-~~~~~~~~ 96 (180)
T cd03214 72 ARKIAY------------------------------------------------------VPQALELLGLA-HLADRPFN 96 (180)
T ss_pred HHHHhH------------------------------------------------------HHHHHHHcCCH-hHhcCCcc
Confidence 000000 00145566775 45577889
Q ss_pred cCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc---C-CCeEEEEecCHHHHHhhcCeEEEEecceE
Q 005532 259 SFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK---Q-DVPMVIISHDRAFLDQLCTKIVETEMGVS 334 (692)
Q Consensus 259 ~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~---~-~~tvI~vsHd~~~l~~~~d~i~~l~~G~~ 334 (692)
+||||||||++|||||+.+|++|||||||++||+.+++++.++|++ . +.|+|++||+++++..+||+++++++|++
T Consensus 97 ~LS~G~~qrl~laral~~~p~llllDEP~~~LD~~~~~~~~~~l~~~~~~~~~tiii~sh~~~~~~~~~d~~~~l~~g~i 176 (180)
T cd03214 97 ELSGGERQRVLLARALAQEPPILLLDEPTSHLDIAHQIELLELLRRLARERGKTVVMVLHDLNLAARYADRVILLKDGRI 176 (180)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEE
Confidence 9999999999999999999999999999999999999999887753 3 78999999999999999999999999987
Q ss_pred E
Q 005532 335 R 335 (692)
Q Consensus 335 ~ 335 (692)
.
T Consensus 177 ~ 177 (180)
T cd03214 177 V 177 (180)
T ss_pred E
Confidence 4
No 492
>PRK14243 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.5e-37 Score=322.33 Aligned_cols=203 Identities=25% Similarity=0.316 Sum_probs=167.9
Q ss_pred ceEEEEeEEEEcCCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCC-----CCeeEEEECCccce--------
Q 005532 423 SVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEK-----PRGGEVLLGEHNVL-------- 489 (692)
Q Consensus 423 ~~l~~~~l~~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~-----p~~G~i~~~~~~~~-------- 489 (692)
++|+++||++.|+++++|+++||+|++||++||+|+||||||||+++|+|++. |++|+|.++|.++.
T Consensus 9 ~~l~i~~v~~~~~~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~ 88 (264)
T PRK14243 9 TVLRTENLNVYYGSFLAVKNVWLDIPKNQITAFIGPSGCGKSTILRCFNRLNDLIPGFRVEGKVTFHGKNLYAPDVDPVE 88 (264)
T ss_pred eEEEEeeeEEEECCEEEeecceEEEcCCCEEEEECCCCCCHHHHHHHHHhhhcccCCCCCceEEEECCEEccccccChHH
Confidence 47999999999998889999999999999999999999999999999999976 48999999886541
Q ss_pred ----eeeecccchhhcCCCccHHHHHHHHhccc-----cHHHHHHHHhhcCCCc---ccccccCCCCCHHHHHHHHHHHH
Q 005532 490 ----PNYFEQNQAEALDLDKTVLETVAEAAEDW-----RIDDIKGLLGRCNFKA---DMLDRKVSLLSGGEKARLAFCKF 557 (692)
Q Consensus 490 ----~~~~~q~~~~~l~~~~tv~e~~~~~~~~~-----~~~~~~~~L~~~~l~~---~~~~~~~~~LSgGqkqrv~LAra 557 (692)
.+|+.|+. .+.+ .|+.+|+....... ....+..+++.+++.. ...++++.+|||||||||+||||
T Consensus 89 ~~~~i~~v~q~~--~~~~-~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LSgGq~qrv~lara 165 (264)
T PRK14243 89 VRRRIGMVFQKP--NPFP-KSIYDNIAYGARINGYKGDMDELVERSLRQAALWDEVKDKLKQSGLSLSGGQQQRLCIARA 165 (264)
T ss_pred HhhhEEEEccCC--cccc-ccHHHHHHhhhhhcCcchHHHHHHHHHHHHhCchhhHHHHhcCCcccCCHHHHHHHHHHHH
Confidence 34556543 3333 59999987542211 1223556677777631 24577899999999999999999
Q ss_pred hccCCcEEEEeCCCCCCCHHHHHHHHHHHHhcC--ceEEEEecCHHHHHhhccEEEEEE---------CCEEEEecCChh
Q 005532 558 MVKPSTLLVLDEPTNHLDIPSKEMLEEAISEYK--GTVITVSHDRYFVKQIVNRVVEVK---------GSNLQDYAGDYN 626 (692)
Q Consensus 558 l~~~p~lLlLDEPTn~LD~~~~~~l~~~l~~~~--~tviivSHd~~~l~~~~d~i~~l~---------~g~l~~~~g~~~ 626 (692)
|+.+|+||||||||++||+.+++++.+.|.++. .|||+||||++++..+||+|++|+ +|+++. .|..+
T Consensus 166 l~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tvi~vtH~~~~~~~~~d~v~~l~~~~~~~~~~~g~i~~-~~~~~ 244 (264)
T PRK14243 166 IAVQPEVILMDEPCSALDPISTLRIEELMHELKEQYTIIIVTHNMQQAARVSDMTAFFNVELTEGGGRYGYLVE-FDRTE 244 (264)
T ss_pred HhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEecccccccccCceEEE-eCCHH
Confidence 999999999999999999999999999998763 599999999999999999999998 788874 46665
Q ss_pred HHH
Q 005532 627 YYL 629 (692)
Q Consensus 627 ~~~ 629 (692)
++.
T Consensus 245 ~~~ 247 (264)
T PRK14243 245 KIF 247 (264)
T ss_pred HHH
Confidence 554
No 493
>COG4181 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=6.4e-38 Score=291.42 Aligned_cols=193 Identities=28% Similarity=0.424 Sum_probs=168.1
Q ss_pred eEEEEeEEEEcCC----eecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccce----------
Q 005532 424 VVTIKNLEFGYED----RLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL---------- 489 (692)
Q Consensus 424 ~l~~~~l~~~y~~----~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~~---------- 489 (692)
+|+++++++..+. -.+|++|+|.|.+||.+|||||+||||||||-+++|+..|++|+|.+.|+++.
T Consensus 6 ii~~~~l~ktvg~~~~~l~IL~~V~L~v~~Ge~vaiVG~SGSGKSTLl~vlAGLd~~ssGeV~l~G~~L~~ldEd~rA~~ 85 (228)
T COG4181 6 IIEVHHLSKTVGQGEGELSILKGVELVVKRGETVAIVGPSGSGKSTLLAVLAGLDDPSSGEVRLLGQPLHKLDEDARAAL 85 (228)
T ss_pred eeehhhhhhhhcCCCcceeEeecceEEecCCceEEEEcCCCCcHHhHHHHHhcCCCCCCceEEEcCcchhhcCHHHHHHh
Confidence 6899999998864 46999999999999999999999999999999999999999999999887652
Q ss_pred ----eeeecccchhhcCCCccHHHHHHHHhcc------ccHHHHHHHHhhcCCCcccccccCCCCCHHHHHHHHHHHHhc
Q 005532 490 ----PNYFEQNQAEALDLDKTVLETVAEAAED------WRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMV 559 (692)
Q Consensus 490 ----~~~~~q~~~~~l~~~~tv~e~~~~~~~~------~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~LAral~ 559 (692)
.++++|. ..+.+++|..||+...... .....++.+|+.+|+. ..++.+|.+|||||||||+|||||.
T Consensus 86 R~~~vGfVFQS--F~Lip~ltAlENV~lPleL~ge~~~~~~~~A~~lL~~vGLg-~Rl~HyP~qLSGGEQQRVAiARAfa 162 (228)
T COG4181 86 RARHVGFVFQS--FHLIPNLTALENVALPLELRGESSADSRAGAKALLEAVGLG-KRLTHYPAQLSGGEQQRVALARAFA 162 (228)
T ss_pred hccceeEEEEe--eeccccchhhhhccchhhhcCCccccHHHHHHHHHHHhCcc-cccccCccccCchHHHHHHHHHHhc
Confidence 3556653 4678999999998754321 1234578899999995 6788899999999999999999999
Q ss_pred cCCcEEEEeCCCCCCCHHHHHHHHHHHHh----cCceEEEEecCHHHHHhhccEEEEEECCEEEE
Q 005532 560 KPSTLLVLDEPTNHLDIPSKEMLEEAISE----YKGTVITVSHDRYFVKQIVNRVVEVKGSNLQD 620 (692)
Q Consensus 560 ~~p~lLlLDEPTn~LD~~~~~~l~~~l~~----~~~tviivSHd~~~l~~~~d~i~~l~~g~l~~ 620 (692)
..|+||+.||||.+||.++-+.+.++|-. .+.|+|+||||..++.+ |+|++.|..|+++.
T Consensus 163 ~~P~vLfADEPTGNLD~~Tg~~iaDLlF~lnre~G~TlVlVTHD~~LA~R-c~R~~r~~~G~l~~ 226 (228)
T COG4181 163 GRPDVLFADEPTGNLDRATGDKIADLLFALNRERGTTLVLVTHDPQLAAR-CDRQLRLRSGRLVE 226 (228)
T ss_pred CCCCEEeccCCCCCcchhHHHHHHHHHHHHhhhcCceEEEEeCCHHHHHh-hhheeeeecceecc
Confidence 99999999999999999999998888753 45699999999999988 99999999999873
No 494
>cd03290 ABCC_SUR1_N The SUR domain 1. The sulfonylurea receptor SUR is an ATP transporter of the ABCC/MRP family with tandem ATPase binding domains. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=100.00 E-value=1.6e-37 Score=314.78 Aligned_cols=196 Identities=21% Similarity=0.335 Sum_probs=150.0
Q ss_pred EEEeEEEEeCC-eeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC--------------ceE
Q 005532 99 KLENISKSYKG-VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN--------------MKI 163 (692)
Q Consensus 99 ~i~~ls~~y~~-~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~--------------~~i 163 (692)
.+.|+.|+|++ .++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.. ..+
T Consensus 2 ~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~i 81 (218)
T cd03290 2 QVTNGYFSWGSGLATLSNINIRIPTGQLTMIVGQVGCGKSSLLLAILGEMQTLEGKVHWSNKNESEPSFEATRSRNRYSV 81 (218)
T ss_pred eeeeeEEecCCCCcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCeEEECCcccccccccccchhhcceE
Confidence 57899999974 579999999999999999999999999999999999999999999997632 359
Q ss_pred EEEcccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHHh
Q 005532 164 AFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLM 243 (692)
Q Consensus 164 ~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll 243 (692)
+|++|++.++ ..|+++|+....... . +.....++ . . .+...+. .+
T Consensus 82 ~~~~q~~~~~-~~t~~~nl~~~~~~~--~----~~~~~~~~--------------~----------~---~l~~~~~-~~ 126 (218)
T cd03290 82 AYAAQKPWLL-NATVEENITFGSPFN--K----QRYKAVTD--------------A----------C---SLQPDID-LL 126 (218)
T ss_pred EEEcCCCccc-cccHHHHHhhcCcCC--H----HHHHHHHH--------------H----------h---CcHHHHH-hC
Confidence 9999999775 679999985321000 0 00000000 0 0 0000010 00
Q ss_pred hhcCCCccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHH--H---HccCCCeEEEEecCHHH
Q 005532 244 PELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEG--Y---LGKQDVPMVIISHDRAF 318 (692)
Q Consensus 244 ~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~--~---L~~~~~tvI~vsHd~~~ 318 (692)
..|.. ...+.++.+|||||||||+|||||+.+|++|||||||++||+.+++.+.+ + +++.+.|+|++||+.++
T Consensus 127 -~~~~~-~~~~~~~~~LS~G~~qrv~laral~~~p~illlDEPt~~LD~~~~~~l~~~~ll~~~~~~~~tii~~sH~~~~ 204 (218)
T cd03290 127 -PFGDQ-TEIGERGINLSGGQRQRICVARALYQNTNIVFLDDPFSALDIHLSDHLMQEGILKFLQDDKRTLVLVTHKLQY 204 (218)
T ss_pred -cCccc-cCcccCCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCccccCHHHHHHHHHHHHHHHHhcCCCEEEEEeCChHH
Confidence 11221 23456789999999999999999999999999999999999999887765 3 44568999999999999
Q ss_pred HHhhcCeEEEEecc
Q 005532 319 LDQLCTKIVETEMG 332 (692)
Q Consensus 319 l~~~~d~i~~l~~G 332 (692)
+. .||+++++++|
T Consensus 205 ~~-~~d~i~~l~~G 217 (218)
T cd03290 205 LP-HADWIIAMKDG 217 (218)
T ss_pred Hh-hCCEEEEecCC
Confidence 86 69999999876
No 495
>TIGR02324 CP_lyasePhnL phosphonate C-P lyase system protein PhnL. Members of this family are the PhnL protein of C-P lyase systems for utilization of phosphonates. These systems resemble phosphonatase-based systems in having a three component ABC transporter, where TIGR01097 is the permease, TIGR01098 is the phosphonates binding protein, and TIGR02315 is the ATP-binding cassette (ABC) protein. They differ, however, in having, typically, ten or more additional genes, many of which are believed to form a membrane-associated C-P lysase complex. This protein (PhnL) and the adjacent-encoded PhnK (TIGR02323) resemble transporter ATP-binding proteins but are suggested, based on mutatgenesis studies, to be part of this C-P lyase complex rather than part of a transporter per se.
Probab=100.00 E-value=1.9e-37 Score=315.40 Aligned_cols=189 Identities=28% Similarity=0.412 Sum_probs=159.9
Q ss_pred eEEEEeEEEEcCC-------eecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEEC--Cc--cc----
Q 005532 424 VVTIKNLEFGYED-------RLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLG--EH--NV---- 488 (692)
Q Consensus 424 ~l~~~~l~~~y~~-------~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~--~~--~~---- 488 (692)
+|+++|+++.|+. ..+|+++||+|++||+++|+|+||||||||+++|+|+++|++|+|.++ |. ++
T Consensus 1 ml~~~~l~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~~~g~~~~~~~~~ 80 (224)
T TIGR02324 1 LLEVEDLSKTFTLHQQGGVRLPVLKNVSLTVNAGECVALSGPSGAGKSTLLKSLYANYLPDSGRILVRHEGAWVDLAQAS 80 (224)
T ss_pred CEEEEeeEEEeecccCCCcceEEEecceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEEecCCCccchhhcC
Confidence 4789999999962 479999999999999999999999999999999999999999999997 32 22
Q ss_pred ----------eeeeecccchhhcCCCccHHHHHHHHhc--cc----cHHHHHHHHhhcCCCcccccccCCCCCHHHHHHH
Q 005532 489 ----------LPNYFEQNQAEALDLDKTVLETVAEAAE--DW----RIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARL 552 (692)
Q Consensus 489 ----------~~~~~~q~~~~~l~~~~tv~e~~~~~~~--~~----~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv 552 (692)
..+|++|+ ..+.+..|+.+++..... .. ....+.++++.+++.....++++.+||||||||+
T Consensus 81 ~~~~~~~~~~~i~~~~q~--~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LS~G~~qrl 158 (224)
T TIGR02324 81 PREVLEVRRKTIGYVSQF--LRVIPRVSALEVVAEPLLERGVPREAARARARELLARLNIPERLWHLPPATFSGGEQQRV 158 (224)
T ss_pred HHHHHHHHhcceEEEecc--cccCCCccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhhhCCcccCCHHHHHHH
Confidence 13466664 346677899999865321 11 1235678899999964445789999999999999
Q ss_pred HHHHHhccCCcEEEEeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhccEEEEEE
Q 005532 553 AFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVK 614 (692)
Q Consensus 553 ~LAral~~~p~lLlLDEPTn~LD~~~~~~l~~~l~~~---~~tviivSHd~~~l~~~~d~i~~l~ 614 (692)
+|||||+.+|++|||||||++||+.+++.+.+.|+++ +.|||+||||.+++..+||+++.+.
T Consensus 159 ~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~vsH~~~~~~~~~d~i~~~~ 223 (224)
T TIGR02324 159 NIARGFIADYPILLLDEPTASLDAANRQVVVELIAEAKARGAALIGIFHDEEVRELVADRVMDVT 223 (224)
T ss_pred HHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcceeEecC
Confidence 9999999999999999999999999999999999865 4599999999999999999999874
No 496
>PRK11176 lipid transporter ATP-binding/permease protein; Provisional
Probab=100.00 E-value=2.7e-37 Score=357.17 Aligned_cols=212 Identities=23% Similarity=0.409 Sum_probs=164.9
Q ss_pred cEEEEeEEEEeCC--eeceeeeeEEEECCcEEEEEcCCCccHHHHHHHHHCCCCCCccEEEECCCC----------ceEE
Q 005532 97 GVKLENISKSYKG--VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN----------MKIA 164 (692)
Q Consensus 97 ~l~i~~ls~~y~~--~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~I~~~~~~----------~~i~ 164 (692)
.|+++|++|+|++ +++|+|+||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|.+ ..|+
T Consensus 341 ~i~~~~vsf~y~~~~~~il~~i~l~i~~G~~~aIvG~sGsGKSTLl~ll~gl~~p~~G~I~i~g~~i~~~~~~~~~~~i~ 420 (582)
T PRK11176 341 DIEFRNVTFTYPGKEVPALRNINFKIPAGKTVALVGRSGSGKSTIANLLTRFYDIDEGEILLDGHDLRDYTLASLRNQVA 420 (582)
T ss_pred eEEEEEEEEecCCCCCccccCceEEeCCCCEEEEECCCCCCHHHHHHHHHhccCCCCceEEECCEEhhhcCHHHHHhhce
Confidence 5999999999975 569999999999999999999999999999999999999999999999853 3699
Q ss_pred EEcccCccCCCCCHHHHHHhhhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhhcCcccHHHHHHHHhh
Q 005532 165 FLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMP 244 (692)
Q Consensus 165 ~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~ 244 (692)
|++|++.+ ++.|++|||..+..+.... +++.++++.+ .+.+.+.++
T Consensus 421 ~v~Q~~~l-f~~Ti~~Ni~~~~~~~~~~----~~i~~al~~~---------------------------~l~~~i~~l-- 466 (582)
T PRK11176 421 LVSQNVHL-FNDTIANNIAYARTEQYSR----EQIEEAARMA---------------------------YAMDFINKM-- 466 (582)
T ss_pred EEccCcee-ecchHHHHHhcCCCCCCCH----HHHHHHHHHh---------------------------CcHHHHHhc--
Confidence 99999887 5689999997431110000 1111111111 011111111
Q ss_pred hcCCCccccccccccCChHHHHHHHHHHHHccCCCeEEEcCCCCCCCHHHHHHHHHHHcc--CCCeEEEEecCHHHHHhh
Q 005532 245 ELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVIISHDRAFLDQL 322 (692)
Q Consensus 245 ~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~lLLLDEPts~LD~~~~~~L~~~L~~--~~~tvI~vsHd~~~l~~~ 322 (692)
.-|+.+...+ ...+||||||||++|||||+++|+||||||||++||+++...+.+.|.+ .++|+|+|||+++.+. .
T Consensus 467 p~Gldt~ig~-~g~~LSGGqrQRi~LARall~~~~ililDEptsaLD~~t~~~i~~~l~~~~~~~tvI~VtHr~~~~~-~ 544 (582)
T PRK11176 467 DNGLDTVIGE-NGVLLSGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQKNRTSLVIAHRLSTIE-K 544 (582)
T ss_pred ccccCceeCC-CCCcCCHHHHHHHHHHHHHHhCCCEEEEECccccCCHHHHHHHHHHHHHHhCCCEEEEEecchHHHH-h
Confidence 1144333333 3578999999999999999999999999999999999999999887754 4799999999998876 4
Q ss_pred cCeEEEEecceEEEeccChHHHH
Q 005532 323 CTKIVETEMGVSRTYEGNYSQYV 345 (692)
Q Consensus 323 ~d~i~~l~~G~~~~~~G~y~~~~ 345 (692)
||+|+++++|++. -.|.+++..
T Consensus 545 ~D~Ii~l~~g~i~-e~g~~~~l~ 566 (582)
T PRK11176 545 ADEILVVEDGEIV-ERGTHAELL 566 (582)
T ss_pred CCEEEEEECCEEE-EeCCHHHHH
Confidence 9999999999984 567766543
No 497
>cd03215 ABC_Carb_Monos_II This family represents domain II of the carbohydrate uptake proteins that transport only monosaccharides (Monos). The Carb_Monos family is involved in the uptake of monosaccharides, such as pentoses (such as xylose, arabinose, and ribose) and hexoses (such as xylose, arabinose, and ribose), that cannot be broken down to simple sugars by hydrolysis. In members of Carb_Monos family the single hydrophobic gene product forms a homodimer, while the ABC protein represents a fusion of two nucleotide-binding domains. However, it is assumed that two copies of the ABC domains are present in the assembled transporter.
Probab=100.00 E-value=1.4e-37 Score=306.33 Aligned_cols=166 Identities=25% Similarity=0.444 Sum_probs=144.8
Q ss_pred CceEEEEeEEEEcCCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccce-----------e
Q 005532 422 RSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL-----------P 490 (692)
Q Consensus 422 ~~~l~~~~l~~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~~-----------~ 490 (692)
.++|+++|++++| +|+++||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|.++. .
T Consensus 2 ~~~l~~~~l~~~~----~l~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~i 77 (182)
T cd03215 2 EPVLEVRGLSVKG----AVRDVSFEVRAGEIVGIAGLVGNGQTELAEALFGLRPPASGEITLDGKPVTRRSPRDAIRAGI 77 (182)
T ss_pred CcEEEEeccEEEe----eecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCccCHHHHHhCCe
Confidence 3479999999998 899999999999999999999999999999999999999999999986542 2
Q ss_pred eeecccch-hhcCCCccHHHHHHHHhccccHHHHHHHHhhcCCCcccccccCCCCCHHHHHHHHHHHHhccCCcEEEEeC
Q 005532 491 NYFEQNQA-EALDLDKTVLETVAEAAEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDE 569 (692)
Q Consensus 491 ~~~~q~~~-~~l~~~~tv~e~~~~~~~~~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~LAral~~~p~lLlLDE 569 (692)
+|+.|+.. ..+.+..|+.+|+..... |||||||||+|||||+.+|+||||||
T Consensus 78 ~~~~q~~~~~~~~~~~t~~e~l~~~~~---------------------------LS~G~~qrl~la~al~~~p~llllDE 130 (182)
T cd03215 78 AYVPEDRKREGLVLDLSVAENIALSSL---------------------------LSGGNQQKVVLARWLARDPRVLILDE 130 (182)
T ss_pred EEecCCcccCcccCCCcHHHHHHHHhh---------------------------cCHHHHHHHHHHHHHccCCCEEEECC
Confidence 35555422 235566788888754210 99999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhccEEEEEECCEE
Q 005532 570 PTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKGSNL 618 (692)
Q Consensus 570 PTn~LD~~~~~~l~~~l~~~---~~tviivSHd~~~l~~~~d~i~~l~~g~l 618 (692)
||++||+.+++.+.+.|+++ +.|+|++|||++++.++||++++|++|++
T Consensus 131 P~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~~~~~~d~v~~l~~G~i 182 (182)
T cd03215 131 PTRGVDVGAKAEIYRLIRELADAGKAVLLISSELDELLGLCDRILVMYEGRI 182 (182)
T ss_pred CCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEecCCcC
Confidence 99999999999999999876 45999999999999999999999998864
No 498
>PRK14264 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.5e-37 Score=326.67 Aligned_cols=212 Identities=24% Similarity=0.380 Sum_probs=174.7
Q ss_pred cCCCCCCCCceEEEEeEEEEcCCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCC-----CCeeEEEECCccc
Q 005532 414 FPERGRSGRSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEK-----PRGGEVLLGEHNV 488 (692)
Q Consensus 414 ~~~~~~~~~~~l~~~~l~~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~-----p~~G~i~~~~~~~ 488 (692)
|........++|.++||++.|+++.+|+++||+|.+|+++||+|+||||||||+++|+|+++ |++|+|.++|.++
T Consensus 35 ~~~~~~~~~~~l~i~nl~~~~~~~~iL~~is~~i~~Ge~~~IvG~nGsGKSTLl~~L~Gl~~~~~~~p~~G~I~i~g~~i 114 (305)
T PRK14264 35 WTDYEFDGDAKLSVEDLDVYYGDDHALKGVSMDIPEKSVTALIGPSGCGKSTFLRCLNRMNDRIKAARIDGSVELDGQDI 114 (305)
T ss_pred ccccccCCCceEEEEEEEEEeCCeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEc
Confidence 33334556678999999999998899999999999999999999999999999999999986 6899999988654
Q ss_pred e------------eeeecccchhhcCCCccHHHHHHHHhcc-------------------ccHHHHHHHHhhcCCCc---
Q 005532 489 L------------PNYFEQNQAEALDLDKTVLETVAEAAED-------------------WRIDDIKGLLGRCNFKA--- 534 (692)
Q Consensus 489 ~------------~~~~~q~~~~~l~~~~tv~e~~~~~~~~-------------------~~~~~~~~~L~~~~l~~--- 534 (692)
. .+|++|+. .+.+ .|+.+|+...... .....+..+++.+++..
T Consensus 115 ~~~~~~~~~~~~~i~~v~q~~--~l~~-~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~ 191 (305)
T PRK14264 115 YQDGVNLVELRKRVGMVFQSP--NPFP-KSIRENISYGPRKHGDINTGLLARLLGRDDKDAEDELVERSLRQAALWDEVN 191 (305)
T ss_pred ccccccHHHHhhceEEEccCC--cccc-ccHHHHHHhHHhhcccccccccccccccCchHHHHHHHHHHHHHcCCchhhh
Confidence 2 34666653 3433 5999998753210 01234677888888742
Q ss_pred ccccccCCCCCHHHHHHHHHHHHhccCCcEEEEeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhccEE-E
Q 005532 535 DMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY--KGTVITVSHDRYFVKQIVNRV-V 611 (692)
Q Consensus 535 ~~~~~~~~~LSgGqkqrv~LAral~~~p~lLlLDEPTn~LD~~~~~~l~~~l~~~--~~tviivSHd~~~l~~~~d~i-~ 611 (692)
...++++.+|||||||||+|||||+.+|+||||||||++||+.++..|.++|+++ +.|||+||||++++..+||++ +
T Consensus 192 ~~~~~~~~~LSgGq~qrv~LAraL~~~p~lLLLDEPtsgLD~~~~~~l~~~L~~~~~~~tiiivtH~~~~i~~~~d~i~~ 271 (305)
T PRK14264 192 DRLDDNALGLSGGQQQRLCIARCLAVDPEVILMDEPASALDPIATSKIEDLIEELAEEYTVVVVTHNMQQAARISDQTAV 271 (305)
T ss_pred HHhcCccccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhcCEEEE
Confidence 3457889999999999999999999999999999999999999999999999877 459999999999999999997 5
Q ss_pred EEECCEEEEecCChhHHH
Q 005532 612 EVKGSNLQDYAGDYNYYL 629 (692)
Q Consensus 612 ~l~~g~l~~~~g~~~~~~ 629 (692)
+|++|+++. .|+.+++.
T Consensus 272 ~l~~G~i~~-~g~~~~~~ 288 (305)
T PRK14264 272 FLTGGELVE-YDDTDKIF 288 (305)
T ss_pred EecCCEEEE-eCCHHHHH
Confidence 679999985 47666554
No 499
>PRK10938 putative molybdenum transport ATP-binding protein ModF; Provisional
Probab=100.00 E-value=1.2e-37 Score=352.56 Aligned_cols=202 Identities=23% Similarity=0.320 Sum_probs=169.7
Q ss_pred eEEEEeEEEEcCCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCeeEEEECCccce----------eeee
Q 005532 424 VVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL----------PNYF 493 (692)
Q Consensus 424 ~l~~~~l~~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p~~G~i~~~~~~~~----------~~~~ 493 (692)
+|+++|+++.|+++.+|+++||+|++|+++||+||||||||||+++|+|+++|++|+|.++|.++. .+|+
T Consensus 3 ~l~~~~l~~~~~~~~il~~vsl~i~~Ge~~~liG~nGsGKSTLl~~l~G~~~p~~G~i~~~~~~~~~~~~~~~~~~i~~~ 82 (490)
T PRK10938 3 SLQISQGTFRLSDTKTLQLPSLTLNAGDSWAFVGANGSGKSALARALAGELPLLSGERQSQFSHITRLSFEQLQKLVSDE 82 (490)
T ss_pred eEEEEeEEEEcCCeeecccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCceEEECCcccccCCHHHHHHHhcee
Confidence 699999999999888999999999999999999999999999999999999999999998775431 2344
Q ss_pred cccchhhc------CCCccHHHHHHHHhccccHHHHHHHHhhcCCCcccccccCCCCCHHHHHHHHHHHHhccCCcEEEE
Q 005532 494 EQNQAEAL------DLDKTVLETVAEAAEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVL 567 (692)
Q Consensus 494 ~q~~~~~l------~~~~tv~e~~~~~~~~~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~LAral~~~p~lLlL 567 (692)
.|+....+ ....++.+++.... .....+..+++.+++. +..++++.+|||||||||+||+||+.+|++|||
T Consensus 83 ~q~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~l~-~~~~~~~~~LSgG~~qrv~la~al~~~p~lllL 159 (490)
T PRK10938 83 WQRNNTDMLSPGEDDTGRTTAEIIQDEV--KDPARCEQLAQQFGIT-ALLDRRFKYLSTGETRKTLLCQALMSEPDLLIL 159 (490)
T ss_pred ccCcchhhcccchhhccccHHHhcccch--hHHHHHHHHHHHcCCH-hhhhCCcccCCHHHHHHHHHHHHHHcCCCEEEE
Confidence 55422111 11457777764321 1134577899999995 567999999999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhccEEEEEECCEEEEecCChhHHH
Q 005532 568 DEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYYL 629 (692)
Q Consensus 568 DEPTn~LD~~~~~~l~~~l~~~---~~tviivSHd~~~l~~~~d~i~~l~~g~l~~~~g~~~~~~ 629 (692)
||||++||+.+++++.+.|.++ +.|||+||||++++.++||+|++|++|++.. .|+.+++.
T Consensus 160 DEPt~~LD~~~~~~l~~~l~~~~~~g~tvii~tH~~~~~~~~~d~v~~l~~G~i~~-~~~~~~~~ 223 (490)
T PRK10938 160 DEPFDGLDVASRQQLAELLASLHQSGITLVLVLNRFDEIPDFVQFAGVLADCTLAE-TGEREEIL 223 (490)
T ss_pred cCCcccCCHHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhCCEEEEEECCEEEE-eCCHHHHh
Confidence 9999999999999999999876 4599999999999999999999999999974 47766554
No 500
>PRK14260 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.3e-37 Score=319.74 Aligned_cols=203 Identities=24% Similarity=0.305 Sum_probs=169.1
Q ss_pred ceEEEEeEEEEcCCeecccceeEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCC-----CeeEEEECCccce--------
Q 005532 423 SVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKP-----RGGEVLLGEHNVL-------- 489 (692)
Q Consensus 423 ~~l~~~~l~~~y~~~~~l~~isl~i~~Ge~v~lvG~NGsGKSTLl~~L~g~~~p-----~~G~i~~~~~~~~-------- 489 (692)
++|+++||++.|+++.+|+++||+|++||++||+|+||||||||+++|+|+++| ++|+|.++|.++.
T Consensus 6 ~~l~~~~l~~~~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLlk~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~ 85 (259)
T PRK14260 6 PAIKVKDLSFYYNTSKAIEGISMDIYRNKVTAIIGPSGCGKSTFIKTLNRISELEGPVKVEGVVDFFGQNIYDPRININR 85 (259)
T ss_pred ceEEEEEEEEEECCeEeecceEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcCcccCCccceEEEECCEeccccccchHh
Confidence 369999999999888899999999999999999999999999999999999985 4899999886541
Q ss_pred ----eeeecccchhhcCCCccHHHHHHHHhcc------cc-HHHHHHHHhhcCCC---cccccccCCCCCHHHHHHHHHH
Q 005532 490 ----PNYFEQNQAEALDLDKTVLETVAEAAED------WR-IDDIKGLLGRCNFK---ADMLDRKVSLLSGGEKARLAFC 555 (692)
Q Consensus 490 ----~~~~~q~~~~~l~~~~tv~e~~~~~~~~------~~-~~~~~~~L~~~~l~---~~~~~~~~~~LSgGqkqrv~LA 555 (692)
.+|++|+. .+++ .|+.+|+...... +. ...+.++++.+++. ....++++.+|||||||||+||
T Consensus 86 ~~~~i~~v~q~~--~l~~-~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LS~G~~qrv~la 162 (259)
T PRK14260 86 LRRQIGMVFQRP--NPFP-MSIYENVAYGVRISAKLPQADLDEIVESALKGAALWQEVKDKLNKSALGLSGGQQQRLCIA 162 (259)
T ss_pred hhhheEEEeccc--ccCC-ccHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCcchhhhHhcCCcccCCHHHHHHHHHH
Confidence 34555543 3444 8999998754211 11 12456778888873 2356788999999999999999
Q ss_pred HHhccCCcEEEEeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhccEEEEEE-----CCEEEEecCChhHH
Q 005532 556 KFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY--KGTVITVSHDRYFVKQIVNRVVEVK-----GSNLQDYAGDYNYY 628 (692)
Q Consensus 556 ral~~~p~lLlLDEPTn~LD~~~~~~l~~~l~~~--~~tviivSHd~~~l~~~~d~i~~l~-----~g~l~~~~g~~~~~ 628 (692)
|||+.+|+||||||||++||+.++..+.+.|.++ +.|||+||||++++..+||++++|+ +|+++. .|+-.++
T Consensus 163 ral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~i~~~~d~i~~l~~~~~~~G~i~~-~~~~~~~ 241 (259)
T PRK14260 163 RALAIKPKVLLMDEPCSALDPIATMKVEELIHSLRSELTIAIVTHNMQQATRVSDFTAFFSTDESRIGQMVE-FGVTTQI 241 (259)
T ss_pred HHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCeEEEEeccCCCCceEEE-eCCHHHH
Confidence 9999999999999999999999999999999876 3599999999999999999999998 488875 4666555
Q ss_pred H
Q 005532 629 L 629 (692)
Q Consensus 629 ~ 629 (692)
.
T Consensus 242 ~ 242 (259)
T PRK14260 242 F 242 (259)
T ss_pred h
Confidence 3
Done!