BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 005534
(692 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O54922|EXOC7_RAT Exocyst complex component 7 OS=Rattus norvegicus GN=Exoc7 PE=2 SV=1
Length = 653
Score = 64.7 bits (156), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 79/364 (21%), Positives = 154/364 (42%), Gaps = 38/364 (10%)
Query: 324 QVLGGIMDGVIWRECFVKIADKLMAVFFRFGEGVARSSKEP------QKLFKLLDMFDSL 377
Q+L GI+ ++ F + + GE + ++++ + + + L
Sbjct: 298 QLLMGIIPEHHQKKTFDSLIQDALDGLMLEGENIVSAARKAIIRHDFSTVLTVFPILRHL 357
Query: 378 EKLKIQFTEIFEGEAGADICTRFRELEKLLVHASSGVFWEFGLQIEGNADG-LPPPKDGS 436
++ K +F ++ +G A A + L + + +F I+ + D PKDG+
Sbjct: 358 KQTKPEFDQVLQGTA-ASTKNKLPGLITSMETIGAKALEDFADNIKNDPDKEYNMPKDGT 416
Query: 437 VPKLVRYAINYLKYLATETYSVSMAKVLRTEQIWKAGILSKPETHENLLKEAISNIMEAL 496
V +L AI +L+ L + + +L +++ + E + LL I ++ L
Sbjct: 417 VHELTSNAILFLQQLLD--FQETAGAMLASQETSSSATSYNSEFSKRLLSTYICKVLGNL 474
Query: 497 QRNIESKRSYYKDRVMPHVFSMNTYWYIYMRTRNTELGKLIG--EQDMKEKYKVVAEESA 554
Q N+ SK Y+D + +F N Y YI +EL +L+ ++ + Y+ E+
Sbjct: 475 QLNLLSKSKVYEDPALSAIFLHNNYNYILKSLEKSELIQLVAVTQKTAERSYREHIEQQI 534
Query: 555 YMYQ--------------MQAWGPLVGLLDMEEEANDAGVAVIRGKMEAFLKGFDEISQR 600
YQ + + P V L D E + +I+ + + F G +E+ +
Sbjct: 535 QTYQRSWLKVTDYIAEKNLPVFQPGVKLRDKERQ-------MIKERFKGFNDGLEELCKI 587
Query: 601 HRGFYNIPDVDLRGQIREATVKFLIPAYTEFLNSNSTLVQAKSYVSPES-IEGLLGQIFD 659
+ + IPD + R +IR+A + Y FL+ S++ K +PE I+ + Q+ D
Sbjct: 588 QKA-WAIPDTEQRDKIRQAQKSIVKETYGAFLHRYSSVPFTK---NPEKYIKYRVEQVGD 643
Query: 660 GADR 663
DR
Sbjct: 644 MIDR 647
>sp|Q9VSJ8|EXOC7_DROME Exocyst complex component 7 OS=Drosophila melanogaster GN=exo70
PE=1 SV=2
Length = 693
Score = 63.5 bits (153), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 111/251 (44%), Gaps = 23/251 (9%)
Query: 432 PKDGSVPKLVRYAINYLKYLATE---TYSVSMAKVLRTEQ---IWKAGILSKPETHENLL 485
PKD +V +L I ++++L S+ VL + Q I L E ++ LL
Sbjct: 444 PKDATVHELTSNTIWFIEHLYDHFDVIGSILAQDVLYSTQLDTILMKKALPVEERNKALL 503
Query: 486 KEAISNIMEALQRNIESKRSYYKDRVMPHVFSMNTYWYIYMRTRNTELGKLI--GEQDMK 543
I + L +I +K Y D+ H+F +N YI + + L L+ E + +
Sbjct: 504 AIYIKKALAELNLSIMNKCEQYNDQATKHLFRLNNIHYILKSLQRSNLIDLVTLAEPECE 563
Query: 544 EKYKVVAEESAYMYQMQAWGP-LVGLLDMEE-------EANDAGVAVIRGKMEAFLKGFD 595
Y + E YQ + W LVG+ ++E + D +V++ + F K F+
Sbjct: 564 HSYMEMIRELKASYQ-KTWSKMLVGIYSLDELPKPVAGKVKDKDRSVLKERFSNFNKDFE 622
Query: 596 EISQRHRGFYNIPDVDLRGQIREATVKFLIPAYTEFLNSNSTLVQAKS---YVS--PESI 650
E + RG +IPDV LR I+ V+ ++P Y F S + +K+ YV I
Sbjct: 623 EACKIQRGI-SIPDVILREGIKRDNVEHILPIYNRFYEIYSGVHFSKNPDKYVKYRQHEI 681
Query: 651 EGLLGQIFDGA 661
+L ++FD +
Sbjct: 682 NAMLSKLFDDS 692
>sp|Q9UPT5|EXOC7_HUMAN Exocyst complex component 7 OS=Homo sapiens GN=EXOC7 PE=1 SV=3
Length = 735
Score = 60.5 bits (145), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 71/315 (22%), Positives = 134/315 (42%), Gaps = 32/315 (10%)
Query: 367 LFKLLDMFDSLEKLKIQFTEIFEGEAGADICTRFRELEKLLVHASSGVFWEFGLQIEGNA 426
+ + + L++ K +F ++ +G A A + L + + +F I+ +
Sbjct: 429 VLTVFPILRHLKQTKPEFDQVLQGTA-ASTKNKLPGLITSMETIGAKALEDFADNIKNDP 487
Query: 427 DG-LPPPKDGSVPKLVRYAINYLKYLATETYSVSMAKVLRTEQIWKAGILSKPETHENLL 485
D PKDG+V +L AI +L+ L + + +L +++ + E + LL
Sbjct: 488 DKEYNMPKDGTVHELTSNAILFLQQLLD--FQETAGAMLASQETSSSATSYSSEFSKRLL 545
Query: 486 KEAISNIMEALQRNIESKRSYYKDRVMPHVFSMNTYWYIYMRTRNTELGKLIG--EQDMK 543
I ++ LQ N+ SK Y+D + +F N Y YI +EL +L+ ++ +
Sbjct: 546 STYICKVLGNLQLNLLSKSKVYEDPALSAIFLHNNYNYILKSLEKSELIQLVAVTQKTAE 605
Query: 544 EKYKVVAEESAYMYQ--------------MQAWGPLVGLLDMEEEANDAGVAVIRGKMEA 589
Y+ E+ YQ + + P V L D E + +I+ + +
Sbjct: 606 RSYREHIEQQIQTYQRSWLKVTDYIAEKNLPVFQPGVKLRDKERQ-------IIKERFKG 658
Query: 590 FLKGFDEISQRHRGFYNIPDVDLRGQIREATVKFLIPAYTEFLNSNSTLVQAKSYVSPES 649
F G +E+ + + + IPD + R +IR+A + Y FL ++ K +PE
Sbjct: 659 FNDGLEELCKIQKA-WAIPDTEQRDRIRQAQKTIVKETYGAFLQKFGSVPFTK---NPEK 714
Query: 650 -IEGLLGQIFDGADR 663
I+ + Q+ D DR
Sbjct: 715 YIKYGVEQVGDMIDR 729
>sp|O35250|EXOC7_MOUSE Exocyst complex component 7 OS=Mus musculus GN=Exoc7 PE=1 SV=2
Length = 697
Score = 54.7 bits (130), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 72/316 (22%), Positives = 131/316 (41%), Gaps = 41/316 (12%)
Query: 377 LEKLKIQFTEIFEGEAGADICTRFRELEKLLVHASSGVFWEFGLQIEGNADG-LPPPKDG 435
L++ K +F ++ +G A A + L + + +F I+ + D PKDG
Sbjct: 388 LKQTKPEFDQVLQGTA-ASTKNKLPGLITSMETIGAKALEDFADNIKNDPDKEYNMPKDG 446
Query: 436 SVPKLVRYAINYLK-----------YLATETYSVSMAKVLRTEQIWKAGILSKPETHENL 484
+V +L AI +L+ LA++ + L + + E + L
Sbjct: 447 TVHELTSNAILFLQQLLDFQETAGAMLASQVLGDTYNIPLDPRETSSSATSYSSEFSKRL 506
Query: 485 LKEAISNIMEALQRNIESKRSYYKDRVMPHVFSMNTYWYIYMRTRNTELGKLIG--EQDM 542
L I ++ LQ N+ SK Y+D + +F N Y YI +EL +L+ ++
Sbjct: 507 LSTYICKVLGNLQLNLLSKSKVYEDPALSAIFLHNNYNYILKSLEKSELIQLVAVTQKTA 566
Query: 543 KEKYKVVAEESAYMYQ--------------MQAWGPLVGLLDMEEEANDAGVAVIRGKME 588
+ Y+ E+ YQ + + P V L D E + +I+ + +
Sbjct: 567 ERSYREHIEQQIQTYQRSWLKVTDYIAEKNLPVFQPGVKLRDKERQ-------MIKERFK 619
Query: 589 AFLKGFDEISQRHRGFYNIPDVDLRGQIREATVKFLIPAYTEFLNSNSTLVQAKSYVSPE 648
F G +E+ + + + IPD + R +IR+A + Y FL+ ++ K +PE
Sbjct: 620 GFNDGLEELCKIQK-VWAIPDTEQRDKIRQAQKDIVKETYGAFLHRYGSVPFTK---NPE 675
Query: 649 S-IEGLLGQIFDGADR 663
I+ + Q+ D DR
Sbjct: 676 KYIKYRVEQVGDMIDR 691
>sp|Q4X0X6|EXO70_ASPFU Exocyst complex protein exo70 OS=Neosartorya fumigata (strain ATCC
MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=exo70
PE=3 SV=1
Length = 628
Score = 43.9 bits (102), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 106/493 (21%), Positives = 186/493 (37%), Gaps = 75/493 (15%)
Query: 187 FEGLLDQALLNLQDEFEGILLQ--ARHQNINELSEDKEADQMVPSDLASELE---VQVLS 241
F LL LQD GIL Q + + ++ L++D +P + SEL + S
Sbjct: 133 FNNLLSTGNAKLQDMLRGILNQYASPIEPLHYLTKDLPFPS-IPQETISELTSICAAIDS 191
Query: 242 RISETLAANDCLDICIDIFVKVRYRRAAKALMQLNPDYLKTYTPEQIDEMEWESLETAIT 301
S D + + I+ VR +L L L T D ++ I
Sbjct: 192 AASHGPQRGDGGNPALKIYADVRGAYLTSSLQNLAIASLNTVKRRAADG-PYKQGTNGIG 250
Query: 302 LWIQHLELAVKTVIVSEKRLSIQVLGGIMDGVIWRECFVKIADKLMAVFFRFGEGVARSS 361
++ LE I +E + Q+ G G+ + F + E +
Sbjct: 251 IYSNALE----NFISTEYEIIAQIFTGDQRGLALQTTFRSALAEYSKTLRELNEYI---- 302
Query: 362 KEPQKLFKLLDMFDSLEKLKIQFTEIFEGEAGADICTRFRELEKLLVHA-------SSGV 414
K + D F + E ++I + + +R EL+ L + A +
Sbjct: 303 ----KANLMTDCFLAFEIIEIVTAMSYR------VDSRTGELKSLFIEALRPVRETAKSS 352
Query: 415 FWEFGLQIEGNADGLP--PPKDGSVPKLVRYAINYLKYLATETYSVSMAKVLRT--EQIW 470
E + + A +P PP GSVP LV ++ L L YS +A +L + + W
Sbjct: 353 LSELLEETKRKAASIPVLPPDGGSVP-LVNEVMSSLTTLTG--YSGPLASILTSLGDGNW 409
Query: 471 K--------AGILSKPETHENLLKEAISNIMEALQRNIESK-RSYYKDRVMPHVFSMNTY 521
+ A + P++ LL I +++EAL ++E++ R+ ++ + + VF N +
Sbjct: 410 RSTANASGTAPLDVSPDSSA-LLSHFILDMIEALMSSLEARGRALHRSKAVQGVFLSNVF 468
Query: 522 WYIYMRTRNT-ELGKLIGEQDMKEKYKVVAEESAYMYQMQAWGPLVG-LLDMEEEAN--- 576
+ R + EL + +G D + + + Y + AW LLD++ +
Sbjct: 469 CIVDRAIRQSPELARHLGTPDSIARIDTFRKRATSTY-LDAWKETSQYLLDVQYTSRAGA 527
Query: 577 ---DAGVA---------------VIRGKMEAFLKGFDEISQRHRGFYNIPDVDLRGQIRE 618
G+ I+ K +AF FDE+ RH+ Y + ++RG +
Sbjct: 528 RPASGGIVDSSAIVKSLSSKDKDAIKDKFKAFNASFDELVNRHKALYM--EREVRGVLAR 585
Query: 619 ATVKFLIPAYTEF 631
L P Y F
Sbjct: 586 EVQAVLEPLYARF 598
>sp|B3EX63|CING_SORAR Cingulin OS=Sorex araneus GN=CGN PE=3 SV=1
Length = 1153
Score = 41.2 bits (95), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 86/198 (43%), Gaps = 37/198 (18%)
Query: 28 ASAKMEDKLGKIDKNFDTIEETISAASRSIAPLHSLAMTTKALETRINRAVSPALALVDS 87
A A++ DKL +++ +EE +S A A SLA +ALE R+ A L
Sbjct: 709 AEARLRDKLQRLEVEKQRLEEALSEAQ---AEEGSLAAAKRALEARLEEAQR---GLSRM 762
Query: 88 FKLAESLQHRLLQLSSRASSLRDSQKRLKLLLKYVD-CVDQLNATLNTINQDGEPVIHKL 146
+ ++L L + + +LR + L+ + +D V++LN L I +D + +H+L
Sbjct: 763 GQEQQALSRALEEEGKQREALRRGKAELEEQKRLLDRTVERLNKELEQIGEDSKQALHQL 822
Query: 147 QEVVEFL---SRTKATDQFR----------------------THRLRETLVTLKALYET- 180
Q +E SR + D R T RLR+TL +A +T
Sbjct: 823 QSQLEDYKEKSRREVADAQRQAKEWASEAEKSSGGLSRLQDETQRLRQTLQASQADLDTA 882
Query: 181 ----EVDAMRFEGLLDQA 194
E+ A R +GL +A
Sbjct: 883 RLDKELLAQRLQGLEQEA 900
>sp|Q8DH61|SYL_THEEB Leucine--tRNA ligase OS=Thermosynechococcus elongatus (strain BP-1)
GN=leuS PE=3 SV=1
Length = 857
Score = 34.7 bits (78), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 59/140 (42%), Gaps = 19/140 (13%)
Query: 189 GLLDQALLNLQDEFEGILLQARHQNINELSEDKEADQMVPSDLASELEVQVLSRISETLA 248
G L Q L + E L +A H I E+SED E D + + +A L ++S L+
Sbjct: 681 GRLGQPLPATLTKAEKDLRRAIHTAIKEISEDIEGDYQLNTAVAE------LMKLSNALS 734
Query: 249 ANDCLDICIDIFVKVRYRRAAKALMQLNPDYLKTYTPEQIDEMEWESLETAITLWIQHLE 308
+ DC + Y + L+ L L + P I E W L ++ Q
Sbjct: 735 SADCYTSGV-------YSEGIQTLLTL----LAPFAP-HISEELWHQLGGTDSIHRQPWP 782
Query: 309 LAVKTVIVS-EKRLSIQVLG 327
A T +V+ E L IQV+G
Sbjct: 783 KADPTALVADEITLVIQVMG 802
>sp|Q8R5N8|HPRK_FUSNN Putative HPr kinase/phosphorylase OS=Fusobacterium nucleatum subsp.
nucleatum (strain ATCC 25586 / CIP 101130 / JCM 8532 /
LMG 13131) GN=hprK PE=3 SV=1
Length = 615
Score = 34.3 bits (77), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
Query: 525 YMRTRNTELGKLIGEQDMKEKYKVVAEESAYMYQMQAWGP---LVGLLDMEEEANDAGVA 581
YM T + KLI E D++ KY S Y+ + P L+G D+ EE + G+
Sbjct: 320 YMNTNRLPVTKLINEFDLEIKYGEDKVSSTYINSSNVYRPSLSLIGFFDLIEEVKNIGIQ 379
Query: 582 V 582
+
Sbjct: 380 I 380
>sp|Q65TL9|MUKB_MANSM Chromosome partition protein MukB OS=Mannheimia succiniciproducens
(strain MBEL55E) GN=mukB PE=3 SV=1
Length = 1499
Score = 33.5 bits (75), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 46/94 (48%), Gaps = 5/94 (5%)
Query: 95 QHRLLQLSSRASSLRDSQKRLKLLLKYVDCVDQLNATLNTINQDG--EPVIHKLQEVVEF 152
QHRL+ LS A+ L +++K L+ + + D LN LN + E + E+ E
Sbjct: 335 QHRLIDLSREAAELTENEKALE--IDHQSASDHLNLVLNALRHQERIERYQEDVNELTEK 392
Query: 153 LSRTKATDQFRTHRLRETLVTLKALYETEVDAMR 186
L K + +L E+ + + L ETEVD +R
Sbjct: 393 LEEQKIVVENANEQLEESQLQFETL-ETEVDQIR 425
>sp|P13311|Y06E_BPT4 Uncharacterized 20.7 kDa protein in vs-regB intergenic region
OS=Enterobacteria phage T4 GN=y06E PE=4 SV=1
Length = 181
Score = 33.5 bits (75), Expect = 6.6, Method: Composition-based stats.
Identities = 30/125 (24%), Positives = 55/125 (44%), Gaps = 9/125 (7%)
Query: 444 AINYLKYLATETYSVSMAKVLR-----TEQIWKAGILSKPETHENLLKEAISNIMEALQR 498
AI+ + + + T+S +R EQ K G K +TH+N+ K + +IM A+
Sbjct: 11 AISMMAHSSEHTFSNVQLDNMRYAYQFGEQFSKDG---KYKTHKNIHKSGLGHIMAAILW 67
Query: 499 NIESKRSYYKDRVMPHVFSMNTYWYIYMRTRNTELGKLIGEQDMKEKYKVVAEESAYMY- 557
S K + H + M + MR R ELG + + ++K + +++ Y
Sbjct: 68 QESSGGVNLKSKPKHHAYGMFQNYLPTMRARVKELGYNMTDAEIKRMLNKRSNSASWAYI 127
Query: 558 QMQAW 562
++ W
Sbjct: 128 ELSYW 132
>sp|A0PVU7|KGD_MYCUA Multifunctional 2-oxoglutarate metabolism enzyme OS=Mycobacterium
ulcerans (strain Agy99) GN=kgd PE=3 SV=1
Length = 1238
Score = 33.1 bits (74), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 35/60 (58%), Gaps = 2/60 (3%)
Query: 192 DQALLNLQDEFEGILLQARH--QNINELSEDKEADQMVPSDLASELEVQVLSRISETLAA 249
+ AL + Q + E + + R ++ + SE E+DQM+P+ LA+ ++ +L+RI + A
Sbjct: 801 EDALRDYQGQLEQVFNEVRELEKHGAQPSESVESDQMIPAGLATAVDKSLLARIGDAFLA 860
>sp|Q9XUP3|EIF3K_CAEEL Eukaryotic translation initiation factor 3 subunit K
OS=Caenorhabditis elegans GN=eif-3.K PE=2 SV=1
Length = 240
Score = 32.7 bits (73), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 65/160 (40%), Gaps = 19/160 (11%)
Query: 280 LKTY--TPEQIDEMEWESLETAITLWIQHLELAVKTVIVSEKRLSIQVLGGIMD-GVIWR 336
LK Y PE+ DE + + + + A+ ++ RL Q L I D G +
Sbjct: 50 LKLYQLNPEKYDEAVVRQVLLKTLMVLPSSDFALAKCLIDTNRLGSQELRRIFDLGAVLE 109
Query: 337 ECFVKIADKLMAVFFRFGEGVARSSKEPQKLFKLLDMFDSLEKLKIQFTEIFEGEAGADI 396
C AVF++ +G + + P + FK+ + K + F + + A I
Sbjct: 110 SCN-------FAVFWKLVKGAYKPTTNPNEPFKVPGEVPKMIKPMVGFEDAVKHYACRVI 162
Query: 397 CTRFRELEK-----LLVHAS----SGVFWEFGLQIEGNAD 427
F+++EK LL AS + + FG + + N D
Sbjct: 163 SVTFQKIEKKMLSRLLGGASDKEVTALAQSFGWEAKENGD 202
>sp|P10999|LAML3_XENLA Lamin-L(III) OS=Xenopus laevis PE=2 SV=2
Length = 583
Score = 32.7 bits (73), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 73/149 (48%), Gaps = 18/149 (12%)
Query: 16 ESACADLKKILKASA----KMEDKLGKIDKNFDTIEETISAASRSIAPLHSLAMTT-KAL 70
E+ AD +K+L +A +++ +LGK+ + + ++ S + SLA + L
Sbjct: 81 ETELADARKLLDQTANERARLQVELGKVREEYRQLQARNSKKENDL----SLAQNQLRDL 136
Query: 71 ETRIN-RAVSPALALVDSFKLAESLQHRLLQLSSRASSLRDSQKRLK-LLLKYVDCVDQL 128
E+++N + A AL L E LQ + Q++ SSLRD+ K+L +L VD L
Sbjct: 137 ESKLNTKEAELATALSGKRGLEEQLQEQRAQIAGLESSLRDTTKQLHDEMLWRVD----L 192
Query: 129 NATLNTINQ--DGEPVIHKLQEVVEFLSR 155
+ TI + D + IH QEV E R
Sbjct: 193 ENKMQTIREQLDFQKNIH-TQEVKEIKKR 220
>sp|A7YH32|CING_CANFA Cingulin OS=Canis familiaris GN=CGN PE=2 SV=1
Length = 1190
Score = 32.7 bits (73), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 54/112 (48%), Gaps = 7/112 (6%)
Query: 28 ASAKMEDKLGKIDKNFDTIEETISAASRSIAPLHSLAMTTKALETRINRAVSPALALVDS 87
A A++ DK+ +++ +EE ++AA SLA +ALE R+ A LA +
Sbjct: 747 AEARLRDKVQRLEAEKQRLEEALNAAQEEEG---SLAAAKRALEARLEEAQR-GLARLGQ 802
Query: 88 FKLAESLQHRLLQLSSRASSLRDSQKRLKLLLKYVD-CVDQLNATLNTINQD 138
+LA L L + + +LR S+ L+ + +D V QLN L I D
Sbjct: 803 EQLA--LNRALEEEGKQREALRRSKAELEEQKRLLDKTVCQLNKELEQIGND 852
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.133 0.372
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 235,364,156
Number of Sequences: 539616
Number of extensions: 9558718
Number of successful extensions: 30642
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 129
Number of HSP's that attempted gapping in prelim test: 30550
Number of HSP's gapped (non-prelim): 224
length of query: 692
length of database: 191,569,459
effective HSP length: 125
effective length of query: 567
effective length of database: 124,117,459
effective search space: 70374599253
effective search space used: 70374599253
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 65 (29.6 bits)