BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 005536
(692 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 178 bits (451), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 119/326 (36%), Positives = 175/326 (53%), Gaps = 28/326 (8%)
Query: 285 FRKRSTSLRNQLSAKRLLCQAAGNSSVPFYPYK----EIEKATSFFSEKHRLGTGAYGTV 340
+ K + S+ + LS+ L VPF Y+ ++E+AT+ F K +G G +G V
Sbjct: 5 YSKATNSINDALSSSYL---------VPFESYRVPLVDLEEATNNFDHKFLIGHGVFGKV 55
Query: 341 YAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYE 400
Y G L + VA+KR + I++ EI+ LS HP+L+ L+G C E E IL+Y+
Sbjct: 56 YKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYK 115
Query: 401 FMPNGTLCQHLQRERGSGLP-----WXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSN 455
+M NG L +HL GS LP W YLH+ I HRD+KS N
Sbjct: 116 YMENGNLKRHLY---GSDLPTMSMSWEQRLEICIGAARGLHYLHTR---AIIHRDVKSIN 169
Query: 456 ILLDYNYRSKVADFGLSRLGMT-ESSHISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGV 514
ILLD N+ K+ DFG+S+ G + +H+ +GT GY+DP+Y L++KSDVYSFGV
Sbjct: 170 ILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGV 229
Query: 515 VLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLEPHRDAWTLSSIHNVA 574
VL E++ A + S P VNLA A++ G +++I+DP L D S+
Sbjct: 230 VLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLA---DKIRPESLRKFG 286
Query: 575 ELAFRCLAFHRDMRPTMMEVAEELEH 600
+ A +CLA + RP+M +V +LE+
Sbjct: 287 DTAVKCLALSSEDRPSMGDVLWKLEY 312
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 177 bits (449), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 121/327 (37%), Positives = 176/327 (53%), Gaps = 30/327 (9%)
Query: 285 FRKRSTSLRNQLSAKRLLCQAAGNSSVPFYPYK----EIEKATSFFSEKHRLGTGAYGTV 340
+ K + S+ + LS+ L VPF Y+ ++E+AT+ F K +G G +G V
Sbjct: 5 YSKATNSINDALSSSYL---------VPFESYRVPLVDLEEATNNFDHKFLIGHGVFGKV 55
Query: 341 YAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYE 400
Y G L + VA+KR + I++ EI+ LS HP+L+ L+G C E E IL+Y+
Sbjct: 56 YKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYK 115
Query: 401 FMPNGTLCQHLQRERGSGLP-----WXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSN 455
+M NG L +HL GS LP W YLH+ I HRD+KS N
Sbjct: 116 YMENGNLKRHLY---GSDLPTMSMSWEQRLEICIGAARGLHYLHTR---AIIHRDVKSIN 169
Query: 456 ILLDYNYRSKVADFGLSRLGMTE--SSHISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFG 513
ILLD N+ K+ DFG+S+ G TE +H+ +GT GY+DP+Y L++KSDVYSFG
Sbjct: 170 ILLDENFVPKITDFGISKKG-TELGQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFG 228
Query: 514 VVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLEPHRDAWTLSSIHNV 573
VVL E++ A + S P VNLA A++ G +++I+DP L D S+
Sbjct: 229 VVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLA---DKIRPESLRKF 285
Query: 574 AELAFRCLAFHRDMRPTMMEVAEELEH 600
+ A +CLA + RP+M +V +LE+
Sbjct: 286 GDTAVKCLALSSEDRPSMGDVLWKLEY 312
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 93/292 (31%), Positives = 153/292 (52%), Gaps = 10/292 (3%)
Query: 314 YPYKEIEKATSFFSEKHRLGTGAYGTVYAGKLHNDDWVAIKRFRY-RDTDSIDQVMNEIK 372
+ +E++ A+ FS K+ LG G +G VY G+L + VA+KR + R Q E++
Sbjct: 28 FSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQTEVE 87
Query: 373 LLSSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLP---WXXXXXXXX 429
++S H NLLRL G C+ E +LVY +M NG++ L RER P W
Sbjct: 88 MISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCL-RERPESQPPLDWPKRQRIAL 146
Query: 430 XXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGT 489
YLH +P I HRD+K++NILLD + + V DFGL++L + H+ A +GT
Sbjct: 147 GSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGT 206
Query: 490 PGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDR--IGR 547
G++ P+Y S+K+DV+ +GV+L+E+IT + D +R ++ ++ L + +
Sbjct: 207 IGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKE 266
Query: 548 GCVDEIIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELE 599
++ ++D L+ + + + + ++A C RP M EV LE
Sbjct: 267 KKLEALVDVDLQGN---YKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 315
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 149 bits (376), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 91/292 (31%), Positives = 152/292 (52%), Gaps = 10/292 (3%)
Query: 314 YPYKEIEKATSFFSEKHRLGTGAYGTVYAGKLHNDDWVAIKRFRYRDTDSID-QVMNEIK 372
+ +E++ A+ F K+ LG G +G VY G+L + VA+KR + T + Q E++
Sbjct: 20 FSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQTEVE 79
Query: 373 LLSSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLP---WXXXXXXXX 429
++S H NLLRL G C+ E +LVY +M NG++ L RER P W
Sbjct: 80 MISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCL-RERPESQPPLDWPKRQRIAL 138
Query: 430 XXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGT 489
YLH +P I HRD+K++NILLD + + V DFGL++L + H+ A +G
Sbjct: 139 GSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGX 198
Query: 490 PGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDR--IGR 547
G++ P+Y S+K+DV+ +GV+L+E+IT + D +R ++ ++ L + +
Sbjct: 199 IGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKE 258
Query: 548 GCVDEIIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELE 599
++ ++D L+ + + + + ++A C RP M EV LE
Sbjct: 259 KKLEALVDVDLQGN---YKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 307
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 92/303 (30%), Positives = 155/303 (51%), Gaps = 22/303 (7%)
Query: 314 YPYKEIEKATSFFSEK------HRLGTGAYGTVYAGKLHNDDWVAIKRFRYR---DTDSI 364
+ + E++ T+ F E+ +++G G +G VY G + N+ VA+K+ T+ +
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEEL 73
Query: 365 DQVMN-EIKLLSSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSG-LPWX 422
Q + EIK+++ H NL+ LLG + + LVY +MPNG+L L G+ L W
Sbjct: 74 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWH 133
Query: 423 XXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHI 482
+LH + HRDIKS+NILLD + +K++DFGL+R + +
Sbjct: 134 MRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTV 190
Query: 483 STAP-QGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALA 541
+ GT Y+ P+ + ++ KSD+YSFGVVL+EIIT L VD H E L L
Sbjct: 191 MXSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVD---EHREPQL--LL 244
Query: 542 IDRIGRGCVDEIIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHI 601
+ ++ I+ Y++ + +S+ + +A +CL ++ RP + +V + L+ +
Sbjct: 245 DIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEM 304
Query: 602 RVS 604
S
Sbjct: 305 TAS 307
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 92/303 (30%), Positives = 154/303 (50%), Gaps = 22/303 (7%)
Query: 314 YPYKEIEKATSFFSEK------HRLGTGAYGTVYAGKLHNDDWVAIKRFRYR---DTDSI 364
+ + E++ T+ F E+ +++G G +G VY G + N+ VA+K+ T+ +
Sbjct: 9 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEEL 67
Query: 365 DQVMN-EIKLLSSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSG-LPWX 422
Q + EIK+++ H NL+ LLG + + LVY +MPNG+L L G+ L W
Sbjct: 68 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWH 127
Query: 423 XXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHI 482
+LH + HRDIKS+NILLD + +K++DFGL+R + +
Sbjct: 128 MRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXV 184
Query: 483 STAP-QGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALA 541
GT Y+ P+ + ++ KSD+YSFGVVL+EIIT L VD H E L L
Sbjct: 185 MXXRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVD---EHREPQL--LL 238
Query: 542 IDRIGRGCVDEIIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHI 601
+ ++ I+ Y++ + +S+ + +A +CL ++ RP + +V + L+ +
Sbjct: 239 DIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEM 298
Query: 602 RVS 604
S
Sbjct: 299 TAS 301
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 92/303 (30%), Positives = 154/303 (50%), Gaps = 22/303 (7%)
Query: 314 YPYKEIEKATSFFSEK------HRLGTGAYGTVYAGKLHNDDWVAIKRFRYR---DTDSI 364
+ + E++ T+ F E+ +++G G +G VY G + N+ VA+K+ T+ +
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEEL 73
Query: 365 DQVMN-EIKLLSSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSG-LPWX 422
Q + EIK+++ H NL+ LLG + + LVY +MPNG+L L G+ L W
Sbjct: 74 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWH 133
Query: 423 XXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHI 482
+LH + HRDIKS+NILLD + +K++DFGL+R + +
Sbjct: 134 MRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTV 190
Query: 483 STAP-QGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALA 541
GT Y+ P+ + ++ KSD+YSFGVVL+EIIT L VD H E L L
Sbjct: 191 MXXRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVD---EHREPQL--LL 244
Query: 542 IDRIGRGCVDEIIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHI 601
+ ++ I+ Y++ + +S+ + +A +CL ++ RP + +V + L+ +
Sbjct: 245 DIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEM 304
Query: 602 RVS 604
S
Sbjct: 305 TAS 307
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 92/303 (30%), Positives = 150/303 (49%), Gaps = 22/303 (7%)
Query: 314 YPYKEIEKATSFFSEK------HRLGTGAYGTVYAGKLHNDDWVAIKRFRYR---DTDSI 364
+ + E++ T+ F E+ ++ G G +G VY G + N+ VA+K+ T+ +
Sbjct: 6 FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEEL 64
Query: 365 DQVMN-EIKLLSSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSG-LPWX 422
Q + EIK+ + H NL+ LLG + + LVY + PNG+L L G+ L W
Sbjct: 65 KQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWH 124
Query: 423 XXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHI 482
+LH + HRDIKS+NILLD + +K++DFGL+R + +
Sbjct: 125 XRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXV 181
Query: 483 STAP-QGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALA 541
+ GT Y P+ + ++ KSD+YSFGVVL+EIIT L VD H E L L
Sbjct: 182 XXSRIVGTTAYXAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVD---EHREPQL--LL 235
Query: 542 IDRIGRGCVDEIIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHI 601
+ ++ I+ Y++ + +S+ +A +CL ++ RP + +V + L+
Sbjct: 236 DIKEEIEDEEKTIEDYIDKKXNDADSTSVEAXYSVASQCLHEKKNKRPDIKKVQQLLQEX 295
Query: 602 RVS 604
S
Sbjct: 296 TAS 298
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/196 (33%), Positives = 105/196 (53%), Gaps = 6/196 (3%)
Query: 329 KHRLGTGAYGTVYAGKLHNDDWVAIKRFRYRD--TDSIDQVMNEIKLLSSVSHPNLLRLL 386
K ++G G++GTV+ + H D VA+K +D + +++ + E+ ++ + HPN++ +
Sbjct: 42 KEKIGAGSFGTVHRAEWHGSD-VAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFM 100
Query: 387 GCCIEEGEPILVYEFMPNGTLCQHLQRERG-SGLPWXXXXXXXXXXXXXXXYLHSAMNPP 445
G + +V E++ G+L + L + L YLH+ NPP
Sbjct: 101 GAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR-NPP 159
Query: 446 IYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLSD 505
I HRD+KS N+L+D Y KV DFGLSRL + S GTP ++ P+ + ++
Sbjct: 160 IVHRDLKSPNLLVDKKYTVKVCDFGLSRLKAS-XFLXSKXAAGTPEWMAPEVLRDEPSNE 218
Query: 506 KSDVYSFGVVLIEIIT 521
KSDVYSFGV+L E+ T
Sbjct: 219 KSDVYSFGVILWELAT 234
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 109/197 (55%), Gaps = 8/197 (4%)
Query: 329 KHRLGTGAYGTVYAGKLHNDDWVAIKRFRYRD--TDSIDQVMNEIKLLSSVSHPNLLRLL 386
K ++G G++GTV+ + H D VA+K +D + +++ + E+ ++ + HPN++ +
Sbjct: 42 KEKIGAGSFGTVHRAEWHGSD-VAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFM 100
Query: 387 GCCIEEGEPILVYEFMPNGTLCQHLQRERG-SGLPWXXXXXXXXXXXXXXXYLHSAMNPP 445
G + +V E++ G+L + L + L YLH+ NPP
Sbjct: 101 GAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR-NPP 159
Query: 446 IYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHIST-APQGTPGYLDPQYHQYFHLS 504
I HR++KS N+L+D Y KV DFGLSRL S+ +S+ + GTP ++ P+ + +
Sbjct: 160 IVHRNLKSPNLLVDKKYTVKVCDFGLSRL--KASTFLSSKSAAGTPEWMAPEVLRDEPSN 217
Query: 505 DKSDVYSFGVVLIEIIT 521
+KSDVYSFGV+L E+ T
Sbjct: 218 EKSDVYSFGVILWELAT 234
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 105/206 (50%), Gaps = 5/206 (2%)
Query: 330 HRLGTGAYGTVYAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGCC 389
+G+G +G V+ G N D VAIK R S + + E +++ +SHP L++L G C
Sbjct: 13 QEIGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 71
Query: 390 IEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHR 449
+E+ LV+EFM +G L +L+ +RG YL A + HR
Sbjct: 72 LEQAPICLVFEFMEHGCLSDYLRTQRGL-FAAETLLGMCLDVCEGMAYLEEA---SVIHR 127
Query: 450 DIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLSDKSDV 509
D+ + N L+ N KV+DFG++R + + ST + + P+ + S KSDV
Sbjct: 128 DLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDV 187
Query: 510 YSFGVVLIEIITALKVVDFSRPHSEV 535
+SFGV++ E+ + K+ +R +SEV
Sbjct: 188 WSFGVLMWEVFSEGKIPYENRSNSEV 213
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 106/206 (51%), Gaps = 5/206 (2%)
Query: 330 HRLGTGAYGTVYAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGCC 389
+G+G +G V+ G N D VAIK + + S D + E +++ +SHP L++L G C
Sbjct: 33 QEIGSGQFGLVHLGYWLNKDKVAIKTIK-EGSMSEDDFIEEAEVMMKLSHPKLVQLYGVC 91
Query: 390 IEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHR 449
+E+ LV+EFM +G L +L+ +RG YL A + HR
Sbjct: 92 LEQAPICLVFEFMEHGCLSDYLRTQRGL-FAAETLLGMCLDVCEGMAYLEEAC---VIHR 147
Query: 450 DIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLSDKSDV 509
D+ + N L+ N KV+DFG++R + + ST + + P+ + S KSDV
Sbjct: 148 DLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDV 207
Query: 510 YSFGVVLIEIITALKVVDFSRPHSEV 535
+SFGV++ E+ + K+ +R +SEV
Sbjct: 208 WSFGVLMWEVFSEGKIPYENRSNSEV 233
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 105/206 (50%), Gaps = 5/206 (2%)
Query: 330 HRLGTGAYGTVYAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGCC 389
+G+G +G V+ G N D VAIK R S + + E +++ +SHP L++L G C
Sbjct: 13 QEIGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 71
Query: 390 IEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHR 449
+E+ LV+EFM +G L +L+ +RG YL A + HR
Sbjct: 72 LEQAPICLVFEFMEHGCLSDYLRTQRGL-FAAETLLGMCLDVCEGMAYLEEAC---VIHR 127
Query: 450 DIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLSDKSDV 509
D+ + N L+ N KV+DFG++R + + ST + + P+ + S KSDV
Sbjct: 128 DLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDV 187
Query: 510 YSFGVVLIEIITALKVVDFSRPHSEV 535
+SFGV++ E+ + K+ +R +SEV
Sbjct: 188 WSFGVLMWEVFSEGKIPYENRSNSEV 213
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 105/206 (50%), Gaps = 5/206 (2%)
Query: 330 HRLGTGAYGTVYAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGCC 389
+G+G +G V+ G N D VAIK R S + + E +++ +SHP L++L G C
Sbjct: 16 QEIGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 74
Query: 390 IEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHR 449
+E+ LV+EFM +G L +L+ +RG YL A + HR
Sbjct: 75 LEQAPICLVFEFMEHGCLSDYLRTQRGL-FAAETLLGMCLDVCEGMAYLEEAC---VIHR 130
Query: 450 DIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLSDKSDV 509
D+ + N L+ N KV+DFG++R + + ST + + P+ + S KSDV
Sbjct: 131 DLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDV 190
Query: 510 YSFGVVLIEIITALKVVDFSRPHSEV 535
+SFGV++ E+ + K+ +R +SEV
Sbjct: 191 WSFGVLMWEVFSEGKIPYENRSNSEV 216
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 105/206 (50%), Gaps = 5/206 (2%)
Query: 330 HRLGTGAYGTVYAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGCC 389
+G+G +G V+ G N D VAIK R S + + E +++ +SHP L++L G C
Sbjct: 11 QEIGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 69
Query: 390 IEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHR 449
+E+ LV+EFM +G L +L+ +RG YL A + HR
Sbjct: 70 LEQAPICLVFEFMEHGCLSDYLRTQRGL-FAAETLLGMCLDVCEGMAYLEEAC---VIHR 125
Query: 450 DIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLSDKSDV 509
D+ + N L+ N KV+DFG++R + + ST + + P+ + S KSDV
Sbjct: 126 DLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDV 185
Query: 510 YSFGVVLIEIITALKVVDFSRPHSEV 535
+SFGV++ E+ + K+ +R +SEV
Sbjct: 186 WSFGVLMWEVFSEGKIPYENRSNSEV 211
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 73/218 (33%), Positives = 106/218 (48%), Gaps = 9/218 (4%)
Query: 306 AGNSSVPFYPYKEIEKATSFFSEKHRLGTGAYGTVYAGKLHNDDW-VAIKRFRYRDTDSI 364
A + S P Y E+E+ + KH+LG G YG VY G VA+K + DT +
Sbjct: 2 AMDPSSPNYDKWEMERTD--ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEV 58
Query: 365 DQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXX 424
++ + E ++ + HPNL++LLG C E ++ EFM G L +L+ +
Sbjct: 59 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL 118
Query: 425 XXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHIST 484
YL HRD+ + N L+ N+ KVADFGLSRL MT ++ +
Sbjct: 119 LYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRL-MTGDTYTAH 174
Query: 485 APQGTP-GYLDPQYHQYFHLSDKSDVYSFGVVLIEIIT 521
A P + P+ Y S KSDV++FGV+L EI T
Sbjct: 175 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/217 (32%), Positives = 105/217 (48%), Gaps = 7/217 (3%)
Query: 307 GNSSVPFYPYKEIEKATSFFSEKHRLGTGAYGTVYAGKLHNDDW-VAIKRFRYRDTDSID 365
G ++ F + E + + KH+LG G YG VY G VA+K + DT ++
Sbjct: 15 GTENLYFQSMDKWEMERTDITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLK-EDTMEVE 73
Query: 366 QVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXX 425
+ + E ++ + HPNL++LLG C E +V E+MP G L +L+ +
Sbjct: 74 EFLKEAAVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLL 133
Query: 426 XXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTA 485
YL HRD+ + N L+ N+ KVADFGLSRL MT ++ + A
Sbjct: 134 YMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHVVKVADFGLSRL-MTGDTYTAHA 189
Query: 486 PQGTP-GYLDPQYHQYFHLSDKSDVYSFGVVLIEIIT 521
P + P+ Y S KSDV++FGV+L EI T
Sbjct: 190 GAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIAT 226
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/218 (33%), Positives = 106/218 (48%), Gaps = 9/218 (4%)
Query: 306 AGNSSVPFYPYKEIEKATSFFSEKHRLGTGAYGTVYAGKLHNDDW-VAIKRFRYRDTDSI 364
A + S P Y E+E+ + KH+LG G YG VY G VA+K + DT +
Sbjct: 2 AMDPSSPNYDKWEMERTD--ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEV 58
Query: 365 DQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXX 424
++ + E ++ + HPNL++LLG C E ++ EFM G L +L+ +
Sbjct: 59 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL 118
Query: 425 XXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHIST 484
YL HRD+ + N L+ N+ KVADFGLSRL MT ++ +
Sbjct: 119 LYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRL-MTGDTYTAH 174
Query: 485 APQGTP-GYLDPQYHQYFHLSDKSDVYSFGVVLIEIIT 521
A P + P+ Y S KSDV++FGV+L EI T
Sbjct: 175 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/210 (33%), Positives = 102/210 (48%), Gaps = 11/210 (5%)
Query: 316 YKEIEKATSFFSEKHRLGTGAYGTVYAGKLHNDDW-VAIKRFRYRDTDSIDQVMNEIKLL 374
Y + E + + KH+LG G YG VY G VA+K + DT +++ + E ++
Sbjct: 6 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVM 64
Query: 375 SSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXX 434
+ HPNL++LLG C E ++ EFM G L +L+ +
Sbjct: 65 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 124
Query: 435 XXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTP---G 491
YL HRD+ + N L+ N+ KVADFGLSRL MT ++ TAP G
Sbjct: 125 MEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRL-MTGDTY--TAPAGAKFPIK 178
Query: 492 YLDPQYHQYFHLSDKSDVYSFGVVLIEIIT 521
+ P+ Y S KSDV++FGV+L EI T
Sbjct: 179 WTAPESLAYNKFSIKSDVWAFGVLLWEIAT 208
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 104/206 (50%), Gaps = 5/206 (2%)
Query: 330 HRLGTGAYGTVYAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGCC 389
+G+G +G V+ G N D VAIK R S + + E +++ +SHP L++L G C
Sbjct: 14 QEIGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 72
Query: 390 IEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHR 449
+E+ LV EFM +G L +L+ +RG YL A + HR
Sbjct: 73 LEQAPICLVTEFMEHGCLSDYLRTQRGL-FAAETLLGMCLDVCEGMAYLEEAC---VIHR 128
Query: 450 DIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLSDKSDV 509
D+ + N L+ N KV+DFG++R + + ST + + P+ + S KSDV
Sbjct: 129 DLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDV 188
Query: 510 YSFGVVLIEIITALKVVDFSRPHSEV 535
+SFGV++ E+ + K+ +R +SEV
Sbjct: 189 WSFGVLMWEVFSEGKIPYENRSNSEV 214
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/216 (33%), Positives = 105/216 (48%), Gaps = 9/216 (4%)
Query: 308 NSSVPFYPYKEIEKATSFFSEKHRLGTGAYGTVYAGKLHNDDW-VAIKRFRYRDTDSIDQ 366
+ S P Y E+E+ + KH+LG G YG VY G VA+K + DT +++
Sbjct: 4 DPSSPNYDKWEMERTD--ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEE 60
Query: 367 VMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXX 426
+ E ++ + HPNL++LLG C E ++ EFM G L +L+ +
Sbjct: 61 FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLY 120
Query: 427 XXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAP 486
YL HRD+ + N L+ N+ KVADFGLSRL MT ++ + A
Sbjct: 121 MATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRL-MTGDTYTAHAG 176
Query: 487 QGTP-GYLDPQYHQYFHLSDKSDVYSFGVVLIEIIT 521
P + P+ Y S KSDV++FGV+L EI T
Sbjct: 177 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 101/208 (48%), Gaps = 7/208 (3%)
Query: 316 YKEIEKATSFFSEKHRLGTGAYGTVYAGKLHNDDW-VAIKRFRYRDTDSIDQVMNEIKLL 374
Y + E + + KH+LG G YG VY G VA+K + DT +++ + E ++
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVM 63
Query: 375 SSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXX 434
+ HPNL++LLG C E ++ EFM G L +L+ +
Sbjct: 64 KEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSA 123
Query: 435 XXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTP-GYL 493
YL HRD+ + N L+ N+ KVADFGLSRL MT ++ + A P +
Sbjct: 124 MEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRL-MTGDTYTAHAGAKFPIKWT 179
Query: 494 DPQYHQYFHLSDKSDVYSFGVVLIEIIT 521
P+ Y S KSDV++FGV+L EI T
Sbjct: 180 APESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 101/208 (48%), Gaps = 7/208 (3%)
Query: 316 YKEIEKATSFFSEKHRLGTGAYGTVYAGKLHNDDW-VAIKRFRYRDTDSIDQVMNEIKLL 374
Y + E + + KH+LG G YG VY G VA+K + DT +++ + E ++
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVM 63
Query: 375 SSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXX 434
+ HPNL++LLG C E ++ EFM G L +L+ +
Sbjct: 64 KEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSA 123
Query: 435 XXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTP-GYL 493
YL HRD+ + N L+ N+ KVADFGLSRL MT ++ + A P +
Sbjct: 124 MEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRL-MTGDTYTAHAGAKFPIKWT 179
Query: 494 DPQYHQYFHLSDKSDVYSFGVVLIEIIT 521
P+ Y S KSDV++FGV+L EI T
Sbjct: 180 APESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/210 (33%), Positives = 102/210 (48%), Gaps = 11/210 (5%)
Query: 316 YKEIEKATSFFSEKHRLGTGAYGTVYAGKLHNDDW-VAIKRFRYRDTDSIDQVMNEIKLL 374
Y + E + + KH+LG G YG VY G VA+K + DT +++ + E ++
Sbjct: 7 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVM 65
Query: 375 SSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXX 434
+ HPNL++LLG C E ++ EFM G L +L+ +
Sbjct: 66 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 125
Query: 435 XXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTP---G 491
YL HRD+ + N L+ N+ KVADFGLSRL MT ++ TAP G
Sbjct: 126 MEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRL-MTGDTY--TAPAGAKFPIK 179
Query: 492 YLDPQYHQYFHLSDKSDVYSFGVVLIEIIT 521
+ P+ Y S KSDV++FGV+L EI T
Sbjct: 180 WTAPESLAYNKFSIKSDVWAFGVLLWEIAT 209
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/216 (33%), Positives = 105/216 (48%), Gaps = 9/216 (4%)
Query: 308 NSSVPFYPYKEIEKATSFFSEKHRLGTGAYGTVYAGKLHNDDW-VAIKRFRYRDTDSIDQ 366
+ S P Y E+E+ + KH+LG G YG VY G VA+K + DT +++
Sbjct: 4 DPSSPNYDKWEMERTD--ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEE 60
Query: 367 VMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXX 426
+ E ++ + HPNL++LLG C E ++ EFM G L +L+ +
Sbjct: 61 FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLY 120
Query: 427 XXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAP 486
YL HRD+ + N L+ N+ KVADFGLSRL MT ++ + A
Sbjct: 121 MATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRL-MTGDTYTAHAG 176
Query: 487 QGTP-GYLDPQYHQYFHLSDKSDVYSFGVVLIEIIT 521
P + P+ Y S KSDV++FGV+L EI T
Sbjct: 177 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 101/208 (48%), Gaps = 7/208 (3%)
Query: 316 YKEIEKATSFFSEKHRLGTGAYGTVYAGKLHNDDW-VAIKRFRYRDTDSIDQVMNEIKLL 374
Y + E + + KH+LG G YG VY G VA+K + DT +++ + E ++
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVM 63
Query: 375 SSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXX 434
+ HPNL++LLG C E ++ EFM G L +L+ +
Sbjct: 64 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSA 123
Query: 435 XXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTP-GYL 493
YL HRD+ + N L+ N+ KVADFGLSRL MT ++ + A P +
Sbjct: 124 MEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRL-MTGDTYTAHAGAKFPIKWT 179
Query: 494 DPQYHQYFHLSDKSDVYSFGVVLIEIIT 521
P+ Y S KSDV++FGV+L EI T
Sbjct: 180 APESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/218 (33%), Positives = 105/218 (48%), Gaps = 9/218 (4%)
Query: 306 AGNSSVPFYPYKEIEKATSFFSEKHRLGTGAYGTVYAGKLHNDDW-VAIKRFRYRDTDSI 364
A + S P Y E+E+ + KH+LG G YG VY G VA+K + DT +
Sbjct: 2 AMDPSSPNYDKWEMERTD--ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEV 58
Query: 365 DQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXX 424
++ + E ++ + HPNL++LLG C E ++ EFM G L +L+ +
Sbjct: 59 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL 118
Query: 425 XXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHIST 484
YL HRD+ + N L+ N+ KVADFGLSRL MT + +
Sbjct: 119 LYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRL-MTGDTXTAH 174
Query: 485 APQGTP-GYLDPQYHQYFHLSDKSDVYSFGVVLIEIIT 521
A P + P+ Y S KSDV++FGV+L EI T
Sbjct: 175 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 101/208 (48%), Gaps = 7/208 (3%)
Query: 316 YKEIEKATSFFSEKHRLGTGAYGTVYAGKLHNDDW-VAIKRFRYRDTDSIDQVMNEIKLL 374
Y + E + + KH+LG G YG VY G VA+K + DT +++ + E ++
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVM 63
Query: 375 SSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXX 434
+ HPNL++LLG C E ++ EFM G L +L+ +
Sbjct: 64 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSA 123
Query: 435 XXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTP-GYL 493
YL HRD+ + N L+ N+ KVADFGLSRL MT ++ + A P +
Sbjct: 124 MEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRL-MTGDTYTAHAGAKFPIKWT 179
Query: 494 DPQYHQYFHLSDKSDVYSFGVVLIEIIT 521
P+ Y S KSDV++FGV+L EI T
Sbjct: 180 APESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 101/208 (48%), Gaps = 7/208 (3%)
Query: 316 YKEIEKATSFFSEKHRLGTGAYGTVYAGKLHNDDW-VAIKRFRYRDTDSIDQVMNEIKLL 374
Y + E + + KH+LG G YG VY G VA+K + DT +++ + E ++
Sbjct: 7 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVM 65
Query: 375 SSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXX 434
+ HPNL++LLG C E ++ EFM G L +L+ +
Sbjct: 66 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 125
Query: 435 XXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTP-GYL 493
YL HRD+ + N L+ N+ KVADFGLSRL MT ++ + A P +
Sbjct: 126 MEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRL-MTGDTYTAHAGAKFPIKWT 181
Query: 494 DPQYHQYFHLSDKSDVYSFGVVLIEIIT 521
P+ Y S KSDV++FGV+L EI T
Sbjct: 182 APESLAYNKFSIKSDVWAFGVLLWEIAT 209
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 101/208 (48%), Gaps = 7/208 (3%)
Query: 316 YKEIEKATSFFSEKHRLGTGAYGTVYAGKLHNDDW-VAIKRFRYRDTDSIDQVMNEIKLL 374
Y + E + + KH+LG G YG VY G VA+K + DT +++ + E ++
Sbjct: 9 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVM 67
Query: 375 SSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXX 434
+ HPNL++LLG C E ++ EFM G L +L+ +
Sbjct: 68 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 127
Query: 435 XXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTP-GYL 493
YL HRD+ + N L+ N+ KVADFGLSRL MT ++ + A P +
Sbjct: 128 MEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRL-MTGDTYTAHAGAKFPIKWT 183
Query: 494 DPQYHQYFHLSDKSDVYSFGVVLIEIIT 521
P+ Y S KSDV++FGV+L EI T
Sbjct: 184 APESLAYNKFSIKSDVWAFGVLLWEIAT 211
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 101/208 (48%), Gaps = 7/208 (3%)
Query: 316 YKEIEKATSFFSEKHRLGTGAYGTVYAGKLHNDDW-VAIKRFRYRDTDSIDQVMNEIKLL 374
Y + E + + KH+LG G YG VY G VA+K + DT +++ + E ++
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVM 63
Query: 375 SSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXX 434
+ HPNL++LLG C E ++ EFM G L +L+ +
Sbjct: 64 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 123
Query: 435 XXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTP-GYL 493
YL HRD+ + N L+ N+ KVADFGLSRL MT ++ + A P +
Sbjct: 124 MEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRL-MTGDTYTAHAGAKFPIKWT 179
Query: 494 DPQYHQYFHLSDKSDVYSFGVVLIEIIT 521
P+ Y S KSDV++FGV+L EI T
Sbjct: 180 APESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 101/208 (48%), Gaps = 7/208 (3%)
Query: 316 YKEIEKATSFFSEKHRLGTGAYGTVYAGKLHNDDW-VAIKRFRYRDTDSIDQVMNEIKLL 374
Y + E + + KH+LG G YG VY G VA+K + DT +++ + E ++
Sbjct: 7 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVM 65
Query: 375 SSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXX 434
+ HPNL++LLG C E ++ EFM G L +L+ +
Sbjct: 66 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 125
Query: 435 XXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTP-GYL 493
YL HRD+ + N L+ N+ KVADFGLSRL MT ++ + A P +
Sbjct: 126 MEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRL-MTGDTYTAHAGAKFPIKWT 181
Query: 494 DPQYHQYFHLSDKSDVYSFGVVLIEIIT 521
P+ Y S KSDV++FGV+L EI T
Sbjct: 182 APESLAYNKFSIKSDVWAFGVLLWEIAT 209
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 101/208 (48%), Gaps = 7/208 (3%)
Query: 316 YKEIEKATSFFSEKHRLGTGAYGTVYAGKLHNDDW-VAIKRFRYRDTDSIDQVMNEIKLL 374
Y + E + + KH+LG G YG VY G VA+K + DT +++ + E ++
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVM 63
Query: 375 SSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXX 434
+ HPNL++LLG C E ++ EFM G L +L+ +
Sbjct: 64 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 123
Query: 435 XXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTP-GYL 493
YL HRD+ + N L+ N+ KVADFGLSRL MT ++ + A P +
Sbjct: 124 MEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRL-MTGDTYTAHAGAKFPIKWT 179
Query: 494 DPQYHQYFHLSDKSDVYSFGVVLIEIIT 521
P+ Y S KSDV++FGV+L EI T
Sbjct: 180 APESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 101/208 (48%), Gaps = 7/208 (3%)
Query: 316 YKEIEKATSFFSEKHRLGTGAYGTVYAGKLHNDDW-VAIKRFRYRDTDSIDQVMNEIKLL 374
Y + E + + KH+LG G YG VY G VA+K + DT +++ + E ++
Sbjct: 18 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVM 76
Query: 375 SSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXX 434
+ HPNL++LLG C E ++ EFM G L +L+ +
Sbjct: 77 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 136
Query: 435 XXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTP-GYL 493
YL HRD+ + N L+ N+ KVADFGLSRL MT ++ + A P +
Sbjct: 137 MEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRL-MTGDTYTAHAGAKFPIKWT 192
Query: 494 DPQYHQYFHLSDKSDVYSFGVVLIEIIT 521
P+ Y S KSDV++FGV+L EI T
Sbjct: 193 APESLAYNKFSIKSDVWAFGVLLWEIAT 220
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 100/208 (48%), Gaps = 7/208 (3%)
Query: 316 YKEIEKATSFFSEKHRLGTGAYGTVYAGKLHNDDW-VAIKRFRYRDTDSIDQVMNEIKLL 374
Y + E + + KH+LG G YG VY G VA+K + DT +++ + E ++
Sbjct: 6 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVM 64
Query: 375 SSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXX 434
+ HPNL++LLG C E ++ EFM G L +L+ +
Sbjct: 65 KEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 124
Query: 435 XXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTP-GYL 493
YL HRD+ + N L+ N+ KVADFGLSRL MT + + A P +
Sbjct: 125 MEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRL-MTGDTXTAHAGAKFPIKWT 180
Query: 494 DPQYHQYFHLSDKSDVYSFGVVLIEIIT 521
P+ Y S KSDV++FGV+L EI T
Sbjct: 181 APESLAYNKFSIKSDVWAFGVLLWEIAT 208
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 95/195 (48%), Gaps = 7/195 (3%)
Query: 329 KHRLGTGAYGTVYAGKLHNDDW-VAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLG 387
KH+LG G YG VY G VA+K + DT +++ + E ++ + HPNL++LLG
Sbjct: 16 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLG 74
Query: 388 CCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIY 447
C E ++ EFM G L +L+ + YL
Sbjct: 75 VCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFI 131
Query: 448 HRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTP-GYLDPQYHQYFHLSDK 506
HRD+ + N L+ N+ KVADFGLSRL MT + + A P + P+ Y S K
Sbjct: 132 HRDLAARNCLVGENHLVKVADFGLSRL-MTGDTXTAHAGAKFPIKWTAPESLAYNKFSIK 190
Query: 507 SDVYSFGVVLIEIIT 521
SDV++FGV+L EI T
Sbjct: 191 SDVWAFGVLLWEIAT 205
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 95/195 (48%), Gaps = 7/195 (3%)
Query: 329 KHRLGTGAYGTVYAGKLHNDDW-VAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLG 387
KH+LG G YG VY G VA+K + DT +++ + E ++ + HPNL++LLG
Sbjct: 16 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLG 74
Query: 388 CCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIY 447
C E ++ EFM G L +L+ + YL
Sbjct: 75 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFI 131
Query: 448 HRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTP-GYLDPQYHQYFHLSDK 506
HRD+ + N L+ N+ KVADFGLSRL MT + + A P + P+ Y S K
Sbjct: 132 HRDLAARNCLVGENHLVKVADFGLSRL-MTGDTFTAHAGAKFPIKWTAPESLAYNKFSIK 190
Query: 507 SDVYSFGVVLIEIIT 521
SDV++FGV+L EI T
Sbjct: 191 SDVWAFGVLLWEIAT 205
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 101/208 (48%), Gaps = 7/208 (3%)
Query: 316 YKEIEKATSFFSEKHRLGTGAYGTVYAGKLHNDDW-VAIKRFRYRDTDSIDQVMNEIKLL 374
Y + E + + KH+LG G YG VY G VA+K + DT +++ + E ++
Sbjct: 212 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVM 270
Query: 375 SSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXX 434
+ HPNL++LLG C E ++ EFM G L +L+ +
Sbjct: 271 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSA 330
Query: 435 XXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTP-GYL 493
YL HR++ + N L+ N+ KVADFGLSRL MT ++ + A P +
Sbjct: 331 MEYLEKKN---FIHRNLAARNCLVGENHLVKVADFGLSRL-MTGDTYTAHAGAKFPIKWT 386
Query: 494 DPQYHQYFHLSDKSDVYSFGVVLIEIIT 521
P+ Y S KSDV++FGV+L EI T
Sbjct: 387 APESLAYNKFSIKSDVWAFGVLLWEIAT 414
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 101/208 (48%), Gaps = 7/208 (3%)
Query: 316 YKEIEKATSFFSEKHRLGTGAYGTVYAGKLHNDDW-VAIKRFRYRDTDSIDQVMNEIKLL 374
Y + E + + KH+LG G YG VY G VA+K + DT +++ + E ++
Sbjct: 209 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVM 267
Query: 375 SSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXX 434
+ HPNL++LLG C E ++ EFM G L +L+ +
Sbjct: 268 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 327
Query: 435 XXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTP-GYL 493
YL HR++ + N L+ N+ KVADFGLSRL MT ++ + A P +
Sbjct: 328 MEYLEKKN---FIHRNLAARNCLVGENHLVKVADFGLSRL-MTGDTYTAHAGAKFPIKWT 383
Query: 494 DPQYHQYFHLSDKSDVYSFGVVLIEIIT 521
P+ Y S KSDV++FGV+L EI T
Sbjct: 384 APESLAYNKFSIKSDVWAFGVLLWEIAT 411
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 101/208 (48%), Gaps = 7/208 (3%)
Query: 316 YKEIEKATSFFSEKHRLGTGAYGTVYAGKLHNDDW-VAIKRFRYRDTDSIDQVMNEIKLL 374
Y + E + + KH+LG G YG VY G VA+K + DT +++ + E ++
Sbjct: 251 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVM 309
Query: 375 SSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXX 434
+ HPNL++LLG C E ++ EFM G L +L+ +
Sbjct: 310 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 369
Query: 435 XXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTP-GYL 493
YL HR++ + N L+ N+ KVADFGLSRL MT ++ + A P +
Sbjct: 370 MEYLEKKN---FIHRNLAARNCLVGENHLVKVADFGLSRL-MTGDTYTAHAGAKFPIKWT 425
Query: 494 DPQYHQYFHLSDKSDVYSFGVVLIEIIT 521
P+ Y S KSDV++FGV+L EI T
Sbjct: 426 APESLAYNKFSIKSDVWAFGVLLWEIAT 453
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/195 (33%), Positives = 95/195 (48%), Gaps = 7/195 (3%)
Query: 329 KHRLGTGAYGTVYAGKLHNDDW-VAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLG 387
KH+LG G +G VY G VA+K + DT +++ + E ++ + HPNL++LLG
Sbjct: 16 KHKLGGGQFGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLG 74
Query: 388 CCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIY 447
C E ++ EFM G L +L+ + YL
Sbjct: 75 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFI 131
Query: 448 HRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTP-GYLDPQYHQYFHLSDK 506
HRD+ + N L+ N+ KVADFGLSRL MT + + A P + P+ Y S K
Sbjct: 132 HRDLAARNCLVGENHLVKVADFGLSRL-MTGDTXTAHAGAKFPIKWTAPESLAYNKFSIK 190
Query: 507 SDVYSFGVVLIEIIT 521
SDV++FGV+L EI T
Sbjct: 191 SDVWAFGVLLWEIAT 205
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 98/202 (48%), Gaps = 19/202 (9%)
Query: 332 LGTGAYGTVYAGKLHNDDWVAIKRFRYRDTDSIDQ----VMNEIKLLSSVSHPNLLRLLG 387
+G G +G VY D+ VA+K R+ + I Q V E KL + + HPN++ L G
Sbjct: 15 IGIGGFGKVYRAFWIGDE-VAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRG 73
Query: 388 CCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIY 447
C++E LV EF G L + L +R +P YLH PI
Sbjct: 74 VCLKEPNLCLVMEFARGGPLNRVLSGKR---IPPDILVNWAVQIARGMNYLHDEAIVPII 130
Query: 448 HRDIKSSNILLDYNYRS--------KVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQ 499
HRD+KSSNIL+ + K+ DFGL+R ++ +S A G ++ P+ +
Sbjct: 131 HRDLKSSNILILQKVENGDLSNKILKITDFGLAR-EWHRTTKMSAA--GAYAWMAPEVIR 187
Query: 500 YFHLSDKSDVYSFGVVLIEIIT 521
S SDV+S+GV+L E++T
Sbjct: 188 ASMFSKGSDVWSYGVLLWELLT 209
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 122/272 (44%), Gaps = 23/272 (8%)
Query: 331 RLGTGAYGTVYAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGCCI 390
LG+G +G V GK VA+K + + S D+ E + + +SHP L++ G C
Sbjct: 15 ELGSGQFGVVKLGKWKGQYDVAVKMIK-EGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCS 73
Query: 391 EEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRD 450
+E +V E++ NG L +L R G GL +L S HRD
Sbjct: 74 KEYPIYIVTEYISNGCLLNYL-RSHGKGLEPSQLLEMCYDVCEGMAFLESHQ---FIHRD 129
Query: 451 IKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLSDKSDVY 510
+ + N L+D + KV+DFG++R + + S + + P+ YF S KSDV+
Sbjct: 130 LAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVW 189
Query: 511 SFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLEPHRDAWTLSSI 570
+FG+++ E+ + K+ +SEV L R+ R PH L+S
Sbjct: 190 AFGILMWEVFSLGKMPYDLYTNSEVVLKVSQGHRLYR------------PH-----LAS- 231
Query: 571 HNVAELAFRCLAFHRDMRPTMMEVAEELEHIR 602
+ ++ + C + RPT ++ +E +R
Sbjct: 232 DTIYQIMYSCWHELPEKRPTFQQLLSSIEPLR 263
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 122/283 (43%), Gaps = 37/283 (13%)
Query: 330 HRLGTGAYGTVYAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGCC 389
R+G+G++GTVY GK H D V + + NE+ +L H N+L +G
Sbjct: 30 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 89
Query: 390 IEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHR 449
+ + +V ++ +L HL + YLH+ I HR
Sbjct: 90 TKP-QLAIVTQWCEGSSLYHHLHASE-TKFEMKKLIDIARQTARGMDYLHAK---SIIHR 144
Query: 450 DIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQ-----GTPGYLDPQYHQYFHLS 504
D+KS+NI L + K+ DFGL+ TE S S + Q G+ ++ P + +
Sbjct: 145 DLKSNNIFLHEDNTVKIGDFGLA----TEKSRWSGSHQFEQLSGSILWMAP---EVIRMQ 197
Query: 505 D------KSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYL 558
D +SDVY+FG+VL E++T P+S +N I+ +GRG + P L
Sbjct: 198 DSNPYSFQSDVYAFGIVLYELMTG------QLPYSNINNRDQIIEMVGRGS----LSPDL 247
Query: 559 EPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHI 601
R + + L CL RD RP+ + E+E +
Sbjct: 248 SKVRS----NCPKRMKRLMAECLKKKRDERPSFPRILAEIEEL 286
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 120/279 (43%), Gaps = 29/279 (10%)
Query: 330 HRLGTGAYGTVYAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGCC 389
R+G+G++GTVY GK H D V + + NE+ +L H N+L +G
Sbjct: 18 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 77
Query: 390 IEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHR 449
+ + +V ++ +L HL + YLH+ I HR
Sbjct: 78 TKP-QLAIVTQWCEGSSLYHHLHASE-TKFEMKKLIDIARQTARGMDYLHAK---SIIHR 132
Query: 450 DIKSSNILLDYNYRSKVADFGLSRLGMTES-SHISTAPQGTPGYLDPQYHQYFHLSD--- 505
D+KS+NI L + K+ DFGL+ + S SH G+ ++ P + + D
Sbjct: 133 DLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAP---EVIRMQDSNP 189
Query: 506 ---KSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLEPHR 562
+SDVY+FG+VL E++T P+S +N I+ +GRG + P L R
Sbjct: 190 YSFQSDVYAFGIVLYELMTG------QLPYSNINNRDQIIEMVGRGS----LSPDLSKVR 239
Query: 563 DAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHI 601
+ + L CL RD RP+ + E+E +
Sbjct: 240 S----NCPKRMKRLMAECLKKKRDERPSFPRILAEIEEL 274
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 121/283 (42%), Gaps = 37/283 (13%)
Query: 330 HRLGTGAYGTVYAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGCC 389
R+G+G++GTVY GK H D V + + NE+ +L H N+L +G
Sbjct: 30 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 89
Query: 390 IEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHR 449
+ +V ++ +L HL + YLH+ I HR
Sbjct: 90 TAP-QLAIVTQWCEGSSLYHHLHASE-TKFEMKKLIDIARQTARGMDYLHAK---SIIHR 144
Query: 450 DIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQ-----GTPGYLDPQYHQYFHLS 504
D+KS+NI L + K+ DFGL+ TE S S + Q G+ ++ P + +
Sbjct: 145 DLKSNNIFLHEDNTVKIGDFGLA----TEKSRWSGSHQFEQLSGSILWMAP---EVIRMQ 197
Query: 505 D------KSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYL 558
D +SDVY+FG+VL E++T P+S +N I+ +GRG + P L
Sbjct: 198 DSNPYSFQSDVYAFGIVLYELMTG------QLPYSNINNRDQIIEMVGRGS----LSPDL 247
Query: 559 EPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHI 601
R + + L CL RD RP+ + E+E +
Sbjct: 248 SKVRS----NCPKRMKRLMAECLKKKRDERPSFPRILAEIEEL 286
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 108/229 (47%), Gaps = 8/229 (3%)
Query: 330 HRLGTGAYGTVYAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGCC 389
RLG G +G V+ G +N VA+K + T S+ + E L+ ++ H L+RL
Sbjct: 19 KRLGAGQFGEVWMGYYNNSTKVAVKTLK-PGTMSVQAFLEEANLMKTLQHDKLVRLYAVV 77
Query: 390 IEEGEPI-LVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYH 448
E EPI ++ E+M G+L L+ + G + Y+ H
Sbjct: 78 TRE-EPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIE---RKNYIH 133
Query: 449 RDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLSDKSD 508
RD++++N+L+ + K+ADFGL+R+ + + P+ + + KSD
Sbjct: 134 RDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSD 193
Query: 509 VYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGR--GCVDEIID 555
V+SFG++L EI+T K+ R +++V A R+ R C DE+ D
Sbjct: 194 VWSFGILLYEIVTYGKIPYPGRTNADVMTALSQGYRMPRVENCPDELYD 242
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 111/239 (46%), Gaps = 21/239 (8%)
Query: 316 YKEIEKATSFFSEKHRLGTGAYGTVYAGKLHNDDWVAIKRFRYRD--TDSIDQVMNEIKL 373
Y EIE + S R+G+G++GTVY GK H D VA+K + D + NE+ +
Sbjct: 30 YWEIEASEVMLST--RIGSGSFGTVYKGKWHGD--VAVKILKVVDPTPEQFQAFRNEVAV 85
Query: 374 LSSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXX 433
L H N+L +G ++ I V ++ +L +HL + +
Sbjct: 86 LRKTRHVNILLFMGYMTKDNLAI-VTQWCEGSSLYKHLHVQE-TKFQMFQLIDIARQTAQ 143
Query: 434 XXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTES-SHISTAPQGTPGY 492
YLH+ I HRD+KS+NI L K+ DFGL+ + S S P G+ +
Sbjct: 144 GMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLW 200
Query: 493 LDPQYHQYFH---LSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRG 548
+ P+ + S +SDVYS+G+VL E++T P+S +N I +GRG
Sbjct: 201 MAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTG------ELPYSHINNRDQIIFMVGRG 253
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 114/230 (49%), Gaps = 10/230 (4%)
Query: 330 HRLGTGAYGTVYAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGCC 389
+LG G +G V+ G +N VA+K + T S+ + E L+ ++ H L+RL
Sbjct: 18 KKLGAGQFGEVWMGYYNNSTKVAVKTLK-PGTMSVQAFLEEANLMKTLQHDKLVRLYAVV 76
Query: 390 IEEGEPI-LVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYH 448
+E EPI ++ EFM G+L L+ + G + Y+ H
Sbjct: 77 TKE-EPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIE---RKNYIH 132
Query: 449 RDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTP-GYLDPQYHQYFHLSDKS 507
RD++++N+L+ + K+ADFGL+R+ + ++ + + P + P+ + + KS
Sbjct: 133 RDLRAANVLVSESLMCKIADFGLARV-IEDNEYTAREGAKFPIKWTAPEAINFGCFTIKS 191
Query: 508 DVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGR--GCVDEIID 555
+V+SFG++L EI+T K+ R +++V A R+ R C DE+ D
Sbjct: 192 NVWSFGILLYEIVTYGKIPYPGRTNADVMSALSQGYRMPRMENCPDELYD 241
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 116/277 (41%), Gaps = 29/277 (10%)
Query: 330 HRLGTGAYGTVYAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGCC 389
R+G+G++GTVY GK H D V + + NE+ +L H N+L +G
Sbjct: 19 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 78
Query: 390 IEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHR 449
+ + +V ++ +L HL + YLH+ I HR
Sbjct: 79 TKP-QLAIVTQWCEGSSLYHHLHIIE-TKFEMIKLIDIARQTAQGMDYLHAK---SIIHR 133
Query: 450 DIKSSNILLDYNYRSKVADFGLSRLGMTES-SHISTAPQGTPGYLDPQYHQYFHLSDK-- 506
D+KS+NI L + K+ DFGL+ + S SH G+ ++ P + + DK
Sbjct: 134 DLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAP---EVIRMQDKNP 190
Query: 507 ----SDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLEPHR 562
SDVY+FG+VL E++T P+S +N I +GRG YL P
Sbjct: 191 YSFQSDVYAFGIVLYELMTG------QLPYSNINNRDQIIFMVGRG--------YLSPDL 236
Query: 563 DAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELE 599
+ + L CL RD RP ++ +E
Sbjct: 237 SKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIE 273
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 118/281 (41%), Gaps = 37/281 (13%)
Query: 330 HRLGTGAYGTVYAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGCC 389
R+G+G++GTVY GK H D V + + NE+ +L H N+L +G
Sbjct: 42 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 101
Query: 390 IEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHR 449
+ + +V ++ +L HL + YLH+ I HR
Sbjct: 102 TKP-QLAIVTQWCEGSSLYHHLHIIE-TKFEMIKLIDIARQTAQGMDYLHAK---SIIHR 156
Query: 450 DIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQ-----GTPGYLDPQYHQYFHLS 504
D+KS+NI L + K+ DFGL+ TE S S + Q G+ ++ P + +
Sbjct: 157 DLKSNNIFLHEDLTVKIGDFGLA----TEKSRWSGSHQFEQLSGSILWMAP---EVIRMQ 209
Query: 505 DK------SDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYL 558
DK SDVY+FG+VL E++T P+S +N I +GRG YL
Sbjct: 210 DKNPYSFQSDVYAFGIVLYELMTG------QLPYSNINNRDQIIFMVGRG--------YL 255
Query: 559 EPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELE 599
P + + L CL RD RP ++ +E
Sbjct: 256 SPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIE 296
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 116/277 (41%), Gaps = 29/277 (10%)
Query: 330 HRLGTGAYGTVYAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGCC 389
R+G+G++GTVY GK H D V + + NE+ +L H N+L +G
Sbjct: 19 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 78
Query: 390 IEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHR 449
+ + +V ++ +L HL + YLH+ I HR
Sbjct: 79 TKP-QLAIVTQWCEGSSLYHHLHIIE-TKFEMIKLIDIARQTAQGMDYLHAK---SIIHR 133
Query: 450 DIKSSNILLDYNYRSKVADFGLSRLGMTES-SHISTAPQGTPGYLDPQYHQYFHLSDK-- 506
D+KS+NI L + K+ DFGL+ + S SH G+ ++ P + + DK
Sbjct: 134 DLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAP---EVIRMQDKNP 190
Query: 507 ----SDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLEPHR 562
SDVY+FG+VL E++T P+S +N I +GRG YL P
Sbjct: 191 YSFQSDVYAFGIVLYELMTG------QLPYSNINNRDQIIFMVGRG--------YLSPDL 236
Query: 563 DAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELE 599
+ + L CL RD RP ++ +E
Sbjct: 237 SKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIE 273
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 118/281 (41%), Gaps = 37/281 (13%)
Query: 330 HRLGTGAYGTVYAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGCC 389
R+G+G++GTVY GK H D V + + NE+ +L H N+L +G
Sbjct: 14 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 390 IEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHR 449
+ + +V ++ +L HL + YLH+ I HR
Sbjct: 74 TKP-QLAIVTQWCEGSSLYHHLHIIE-TKFEMIKLIDIARQTAQGMDYLHAK---SIIHR 128
Query: 450 DIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQ-----GTPGYLDPQYHQYFHLS 504
D+KS+NI L + K+ DFGL+ TE S S + Q G+ ++ P + +
Sbjct: 129 DLKSNNIFLHEDLTVKIGDFGLA----TEKSRWSGSHQFEQLSGSILWMAP---EVIRMQ 181
Query: 505 DK------SDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYL 558
DK SDVY+FG+VL E++T P+S +N I +GRG YL
Sbjct: 182 DKNPYSFQSDVYAFGIVLYELMTG------QLPYSNINNRDQIIFMVGRG--------YL 227
Query: 559 EPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELE 599
P + + L CL RD RP ++ +E
Sbjct: 228 SPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIE 268
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 118/281 (41%), Gaps = 37/281 (13%)
Query: 330 HRLGTGAYGTVYAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGCC 389
R+G+G++GTVY GK H D V + + NE+ +L H N+L +G
Sbjct: 34 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 93
Query: 390 IEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHR 449
+ + +V ++ +L HL + YLH+ I HR
Sbjct: 94 TKP-QLAIVTQWCEGSSLYHHLHIIE-TKFEMIKLIDIARQTAQGMDYLHAK---SIIHR 148
Query: 450 DIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQ-----GTPGYLDPQYHQYFHLS 504
D+KS+NI L + K+ DFGL+ TE S S + Q G+ ++ P + +
Sbjct: 149 DLKSNNIFLHEDLTVKIGDFGLA----TEKSRWSGSHQFEQLSGSILWMAP---EVIRMQ 201
Query: 505 DK------SDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYL 558
DK SDVY+FG+VL E++T P+S +N I +GRG YL
Sbjct: 202 DKNPYSFQSDVYAFGIVLYELMTG------QLPYSNINNRDQIIFMVGRG--------YL 247
Query: 559 EPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELE 599
P + + L CL RD RP ++ +E
Sbjct: 248 SPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIE 288
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 116/277 (41%), Gaps = 29/277 (10%)
Query: 330 HRLGTGAYGTVYAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGCC 389
R+G+G++GTVY GK H D V + + NE+ +L H N+L +G
Sbjct: 14 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 390 IEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHR 449
+ + +V ++ +L HL + YLH+ I HR
Sbjct: 74 TKP-QLAIVTQWCEGSSLYHHLHIIE-TKFEMIKLIDIARQTAQGMDYLHAK---SIIHR 128
Query: 450 DIKSSNILLDYNYRSKVADFGLSRLGMTES-SHISTAPQGTPGYLDPQYHQYFHLSDK-- 506
D+KS+NI L + K+ DFGL+ + S SH G+ ++ P + + DK
Sbjct: 129 DLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAP---EVIRMQDKNP 185
Query: 507 ----SDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLEPHR 562
SDVY+FG+VL E++T P+S +N I +GRG YL P
Sbjct: 186 YSFQSDVYAFGIVLYELMTG------QLPYSNINNRDQIIFMVGRG--------YLSPDL 231
Query: 563 DAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELE 599
+ + L CL RD RP ++ +E
Sbjct: 232 SKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIE 268
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 110/222 (49%), Gaps = 19/222 (8%)
Query: 331 RLGTGAYGTVYAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGCCI 390
+LG G +G V+ G + VAIK + T S + + E +++ + H L++L
Sbjct: 274 KLGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 332
Query: 391 EEGEPI-LVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHR 449
EE PI +V E+M G+L L+ E G L Y+ MN HR
Sbjct: 333 EE--PIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER-MN--YVHR 387
Query: 450 DIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTP---GYLDPQYHQYFHLSDK 506
D++++NIL+ N KVADFGL+RL + ++ + TA QG + P+ Y + K
Sbjct: 388 DLRAANILVGENLVCKVADFGLARL-IEDNEY--TARQGAKFPIKWTAPEAALYGRFTIK 444
Query: 507 SDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRG 548
SDV+SFG++L E+ T +V + EV +D++ RG
Sbjct: 445 SDVWSFGILLTELTTKGRVPYPGMVNREV------LDQVERG 480
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 116/277 (41%), Gaps = 29/277 (10%)
Query: 330 HRLGTGAYGTVYAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGCC 389
R+G+G++GTVY GK H D V + + NE+ +L H N+L +G
Sbjct: 16 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 75
Query: 390 IEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHR 449
+ + +V ++ +L HL + YLH+ I HR
Sbjct: 76 TKP-QLAIVTQWCEGSSLYHHLHIIE-TKFEMIKLIDIARQTAQGMDYLHAK---SIIHR 130
Query: 450 DIKSSNILLDYNYRSKVADFGLSRLGMTES-SHISTAPQGTPGYLDPQYHQYFHLSDK-- 506
D+KS+NI L + K+ DFGL+ + S SH G+ ++ P + + DK
Sbjct: 131 DLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAP---EVIRMQDKNP 187
Query: 507 ----SDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLEPHR 562
SDVY+FG+VL E++T P+S +N I +GRG YL P
Sbjct: 188 YSFQSDVYAFGIVLYELMTG------QLPYSNINNRDQIIFMVGRG--------YLSPDL 233
Query: 563 DAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELE 599
+ + L CL RD RP ++ +E
Sbjct: 234 SKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIE 270
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 116/277 (41%), Gaps = 29/277 (10%)
Query: 330 HRLGTGAYGTVYAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGCC 389
R+G+G++GTVY GK H D V + + NE+ +L H N+L +G
Sbjct: 42 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 101
Query: 390 IEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHR 449
+ + +V ++ +L HL + YLH+ I HR
Sbjct: 102 TKP-QLAIVTQWCEGSSLYHHLHIIE-TKFEMIKLIDIARQTAQGMDYLHAK---SIIHR 156
Query: 450 DIKSSNILLDYNYRSKVADFGLSRLGMTES-SHISTAPQGTPGYLDPQYHQYFHLSDK-- 506
D+KS+NI L + K+ DFGL+ + S SH G+ ++ P + + DK
Sbjct: 157 DLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAP---EVIRMQDKNP 213
Query: 507 ----SDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLEPHR 562
SDVY+FG+VL E++T P+S +N I +GRG YL P
Sbjct: 214 YSFQSDVYAFGIVLYELMTG------QLPYSNINNRDQIIFMVGRG--------YLSPDL 259
Query: 563 DAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELE 599
+ + L CL RD RP ++ +E
Sbjct: 260 SKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIE 296
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 110/222 (49%), Gaps = 19/222 (8%)
Query: 331 RLGTGAYGTVYAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGCCI 390
+LG G +G V+ G + VAIK + T S + + E +++ + H L++L
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKIRHEKLVQLYAVVS 83
Query: 391 EEGEPI-LVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHR 449
EE PI +V E+M G+L L+ E G L Y+ MN HR
Sbjct: 84 EE--PIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER-MN--YVHR 138
Query: 450 DIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTP---GYLDPQYHQYFHLSDK 506
D++++NIL+ N KVADFGL+RL + ++ + TA QG + P+ Y + K
Sbjct: 139 DLRAANILVGENLVCKVADFGLARL-IEDNEY--TARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 507 SDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRG 548
SDV+SFG++L E+ T +V + EV +D++ RG
Sbjct: 196 SDVWSFGILLTELTTKGRVPYPGMVNREV------LDQVERG 231
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 116/277 (41%), Gaps = 29/277 (10%)
Query: 330 HRLGTGAYGTVYAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGCC 389
R+G+G++GTVY GK H D V + + NE+ +L H N+L +G
Sbjct: 41 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 100
Query: 390 IEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHR 449
+ + +V ++ +L HL + YLH+ I HR
Sbjct: 101 TKP-QLAIVTQWCEGSSLYHHLHIIE-TKFEMIKLIDIARQTAQGMDYLHAK---SIIHR 155
Query: 450 DIKSSNILLDYNYRSKVADFGLSRLGMTES-SHISTAPQGTPGYLDPQYHQYFHLSDK-- 506
D+KS+NI L + K+ DFGL+ + S SH G+ ++ P + + DK
Sbjct: 156 DLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAP---EVIRMQDKNP 212
Query: 507 ----SDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLEPHR 562
SDVY+FG+VL E++T P+S +N I +GRG YL P
Sbjct: 213 YSFQSDVYAFGIVLYELMTG------QLPYSNINNRDQIIFMVGRG--------YLSPDL 258
Query: 563 DAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELE 599
+ + L CL RD RP ++ +E
Sbjct: 259 SKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIE 295
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/199 (32%), Positives = 99/199 (49%), Gaps = 13/199 (6%)
Query: 331 RLGTGAYGTVYAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGCCI 390
RLG G +G V+ G + + VAIK + T S + + E +++ + H L++L
Sbjct: 16 RLGNGQFGEVWMGTWNGNTKVAIKTLK-PGTMSPESFLEEAQIMKKLKHDKLVQLYAVVS 74
Query: 391 EEGEPI-LVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHR 449
EE PI +V E+M G+L L+ G L Y+ MN HR
Sbjct: 75 EE--PIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIER-MN--YIHR 129
Query: 450 DIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTP---GYLDPQYHQYFHLSDK 506
D++S+NIL+ K+ADFGL+RL E + TA QG + P+ Y + K
Sbjct: 130 DLRSANILVGNGLICKIADFGLARL--IEDNE-XTARQGAKFPIKWTAPEAALYGRFTIK 186
Query: 507 SDVYSFGVVLIEIITALKV 525
SDV+SFG++L E++T +V
Sbjct: 187 SDVWSFGILLTELVTKGRV 205
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 107/222 (48%), Gaps = 19/222 (8%)
Query: 331 RLGTGAYGTVYAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGCCI 390
+LG G +G V+ G + VAIK + T S + + E +++ + H L++L
Sbjct: 15 KLGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 73
Query: 391 EEGEPI-LVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHR 449
EE PI +V E+M G+L L+ E G L Y+ MN HR
Sbjct: 74 EE--PIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER-MN--YVHR 128
Query: 450 DIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTP---GYLDPQYHQYFHLSDK 506
D++++NIL+ N KVADFGL+RL + TA QG + P+ Y + K
Sbjct: 129 DLRAANILVGENLVCKVADFGLARLI---EDNEXTARQGAKFPIKWTAPEAALYGRFTIK 185
Query: 507 SDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRG 548
SDV+SFG++L E+ T +V + EV +D++ RG
Sbjct: 186 SDVWSFGILLTELTTKGRVPYPGMVNREV------LDQVERG 221
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 108/222 (48%), Gaps = 19/222 (8%)
Query: 331 RLGTGAYGTVYAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGCCI 390
+LG G +G V+ G + VAIK + T S + + E +++ + H L++L
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 391 EEGEPI-LVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHR 449
EE PI +V E+M G+L L+ E G L Y+ MN HR
Sbjct: 84 EE--PIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER-MN--YVHR 138
Query: 450 DIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTP---GYLDPQYHQYFHLSDK 506
D++++NIL+ N KVADFGL+RL E + TA QG + P+ Y + K
Sbjct: 139 DLRAANILVGENLVCKVADFGLARL--IEDNE-XTARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 507 SDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRG 548
SDV+SFG++L E+ T +V + EV +D++ RG
Sbjct: 196 SDVWSFGILLTELTTKGRVPYPGMVNREV------LDQVERG 231
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 110/222 (49%), Gaps = 19/222 (8%)
Query: 331 RLGTGAYGTVYAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGCCI 390
+LG G +G V+ G + VAIK + T S + + E +++ + H L++L
Sbjct: 191 KLGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 249
Query: 391 EEGEPI-LVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHR 449
EE PI +V E+M G+L L+ E G L Y+ MN HR
Sbjct: 250 EE--PIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER-MN--YVHR 304
Query: 450 DIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTP---GYLDPQYHQYFHLSDK 506
D++++NIL+ N KVADFGL+RL + ++ + TA QG + P+ Y + K
Sbjct: 305 DLRAANILVGENLVCKVADFGLARL-IEDNEY--TARQGAKFPIKWTAPEAALYGRFTIK 361
Query: 507 SDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRG 548
SDV+SFG++L E+ T +V + EV +D++ RG
Sbjct: 362 SDVWSFGILLTELTTKGRVPYPGMVNREV------LDQVERG 397
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 110/222 (49%), Gaps = 19/222 (8%)
Query: 331 RLGTGAYGTVYAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGCCI 390
+LG G +G V+ G + VAIK + T S + + E +++ + H L++L
Sbjct: 191 KLGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 249
Query: 391 EEGEPI-LVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHR 449
EE PI +V E+M G+L L+ E G L Y+ MN HR
Sbjct: 250 EE--PIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER-MN--YVHR 304
Query: 450 DIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTP---GYLDPQYHQYFHLSDK 506
D++++NIL+ N KVADFGL+RL + ++ + TA QG + P+ Y + K
Sbjct: 305 DLRAANILVGENLVCKVADFGLARL-IEDNEY--TARQGAKFPIKWTAPEAALYGRFTIK 361
Query: 507 SDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRG 548
SDV+SFG++L E+ T +V + EV +D++ RG
Sbjct: 362 SDVWSFGILLTELTTKGRVPYPGMVNREV------LDQVERG 397
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 115/277 (41%), Gaps = 29/277 (10%)
Query: 330 HRLGTGAYGTVYAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGCC 389
R+G+G++GTVY GK H D V + + NE+ +L H N+L +G
Sbjct: 14 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 390 IEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHR 449
+ +V ++ +L HL + YLH+ I HR
Sbjct: 74 TAP-QLAIVTQWCEGSSLYHHLHIIE-TKFEMIKLIDIARQTAQGMDYLHAK---SIIHR 128
Query: 450 DIKSSNILLDYNYRSKVADFGLSRLGMTES-SHISTAPQGTPGYLDPQYHQYFHLSDK-- 506
D+KS+NI L + K+ DFGL+ + S SH G+ ++ P + + DK
Sbjct: 129 DLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAP---EVIRMQDKNP 185
Query: 507 ----SDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLEPHR 562
SDVY+FG+VL E++T P+S +N I +GRG YL P
Sbjct: 186 YSFQSDVYAFGIVLYELMTG------QLPYSNINNRDQIIFMVGRG--------YLSPDL 231
Query: 563 DAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELE 599
+ + L CL RD RP ++ +E
Sbjct: 232 SKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIE 268
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 110/222 (49%), Gaps = 19/222 (8%)
Query: 331 RLGTGAYGTVYAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGCCI 390
+LG G +G V+ G + VAIK + T S + + E +++ + H L++L
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 391 EEGEPI-LVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHR 449
EE PI +V E+M G+L L+ E G L Y+ MN HR
Sbjct: 84 EE--PIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER-MN--YVHR 138
Query: 450 DIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTP---GYLDPQYHQYFHLSDK 506
D++++NIL+ N KVADFGL+RL + ++ + TA QG + P+ Y + K
Sbjct: 139 DLRAANILVGENLVCKVADFGLARL-IEDNEY--TARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 507 SDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRG 548
SDV+SFG++L E+ T +V + EV +D++ RG
Sbjct: 196 SDVWSFGILLTELTTKGRVPYPGMVNREV------LDQVERG 231
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 110/222 (49%), Gaps = 19/222 (8%)
Query: 331 RLGTGAYGTVYAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGCCI 390
+LG G +G V+ G + VAIK + T S + + E +++ + H L++L
Sbjct: 18 KLGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 76
Query: 391 EEGEPI-LVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHR 449
EE PI +V E+M G+L L+ E G L Y+ MN HR
Sbjct: 77 EE--PIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER-MN--YVHR 131
Query: 450 DIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTP---GYLDPQYHQYFHLSDK 506
D++++NIL+ N KVADFGL+RL + ++ + TA QG + P+ Y + K
Sbjct: 132 DLRAANILVGENLVCKVADFGLARL-IEDNEY--TARQGAKFPIKWTAPEAALYGRFTIK 188
Query: 507 SDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRG 548
SDV+SFG++L E+ T +V + EV +D++ RG
Sbjct: 189 SDVWSFGILLTELTTKGRVPYPGMVNREV------LDQVERG 224
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 110/222 (49%), Gaps = 19/222 (8%)
Query: 331 RLGTGAYGTVYAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGCCI 390
+LG G +G V+ G + VAIK + T S + + E +++ + H L++L
Sbjct: 16 KLGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 74
Query: 391 EEGEPI-LVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHR 449
EE PI +V E+M G+L L+ E G L Y+ MN HR
Sbjct: 75 EE--PIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER-MN--YVHR 129
Query: 450 DIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTP---GYLDPQYHQYFHLSDK 506
D++++NIL+ N KVADFGL+RL + ++ + TA QG + P+ Y + K
Sbjct: 130 DLRAANILVGENLVCKVADFGLARL-IEDNEY--TARQGAKFPIKWTAPEAALYGRFTIK 186
Query: 507 SDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRG 548
SDV+SFG++L E+ T +V + EV +D++ RG
Sbjct: 187 SDVWSFGILLTELTTKGRVPYPGMVNREV------LDQVERG 222
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 110/222 (49%), Gaps = 19/222 (8%)
Query: 331 RLGTGAYGTVYAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGCCI 390
+LG G +G V+ G + VAIK + T S + + E +++ + H L++L
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 391 EEGEPI-LVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHR 449
EE PI +V E+M G+L L+ E G L Y+ MN HR
Sbjct: 84 EE--PIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER-MN--YVHR 138
Query: 450 DIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTP---GYLDPQYHQYFHLSDK 506
D++++NIL+ N KVADFGL+RL + ++ + TA QG + P+ Y + K
Sbjct: 139 DLRAANILVGENLVCKVADFGLARL-IEDNEY--TARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 507 SDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRG 548
SDV+SFG++L E+ T +V + EV +D++ RG
Sbjct: 196 SDVWSFGILLTELTTKGRVPYPGMVNREV------LDQVERG 231
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 97/205 (47%), Gaps = 8/205 (3%)
Query: 321 KATSFFSEKHRLGTGAYGTVYAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHP 380
K +F E LGTG +G V GK VAIK + + S D+ + E K++ ++SH
Sbjct: 24 KDLTFLKE---LGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHE 79
Query: 381 NLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHS 440
L++L G C ++ ++ E+M NG L +L RE YL S
Sbjct: 80 KLVQLYGVCTKQRPIFIITEYMANGCLLNYL-REMRHRFQTQQLLEMCKDVCEAMEYLES 138
Query: 441 AMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQY 500
HRD+ + N L++ KV+DFGLSR + + S + + P+ Y
Sbjct: 139 KQ---FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVRWSPPEVLMY 195
Query: 501 FHLSDKSDVYSFGVVLIEIITALKV 525
S KSD+++FGV++ EI + K+
Sbjct: 196 SKFSSKSDIWAFGVLMWEIYSLGKM 220
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 110/222 (49%), Gaps = 19/222 (8%)
Query: 331 RLGTGAYGTVYAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGCCI 390
+LG G +G V+ G + VAIK + T S + + E +++ + H L++L
Sbjct: 191 KLGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 249
Query: 391 EEGEPI-LVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHR 449
EE PI +V E+M G+L L+ E G L Y+ MN HR
Sbjct: 250 EE--PIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER-MN--YVHR 304
Query: 450 DIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTP---GYLDPQYHQYFHLSDK 506
D++++NIL+ N KVADFGL+RL + ++ + TA QG + P+ Y + K
Sbjct: 305 DLRAANILVGENLVCKVADFGLARL-IEDNEY--TARQGAKFPIKWTAPEAALYGRFTIK 361
Query: 507 SDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRG 548
SDV+SFG++L E+ T +V + EV +D++ RG
Sbjct: 362 SDVWSFGILLTELTTKGRVPYPGMVNREV------LDQVERG 397
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 110/222 (49%), Gaps = 19/222 (8%)
Query: 331 RLGTGAYGTVYAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGCCI 390
+LG G +G V+ G + VAIK + T S + + E +++ + H L++L
Sbjct: 14 KLGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 72
Query: 391 EEGEPI-LVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHR 449
EE PI +V E+M G+L L+ E G L Y+ MN HR
Sbjct: 73 EE--PIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER-MN--YVHR 127
Query: 450 DIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTP---GYLDPQYHQYFHLSDK 506
D++++NIL+ N KVADFGL+RL + ++ + TA QG + P+ Y + K
Sbjct: 128 DLRAANILVGENLVCKVADFGLARL-IEDNEY--TARQGAKFPIKWTAPEAALYGRFTIK 184
Query: 507 SDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRG 548
SDV+SFG++L E+ T +V + EV +D++ RG
Sbjct: 185 SDVWSFGILLTELTTKGRVPYPGMVNREV------LDQVERG 220
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 110/222 (49%), Gaps = 19/222 (8%)
Query: 331 RLGTGAYGTVYAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGCCI 390
+LG G +G V+ G + VAIK + T S + + E +++ + H L++L
Sbjct: 22 KLGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 80
Query: 391 EEGEPI-LVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHR 449
EE PI +V E+M G+L L+ E G L Y+ MN HR
Sbjct: 81 EE--PIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVER-MN--YVHR 135
Query: 450 DIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTP---GYLDPQYHQYFHLSDK 506
D++++NIL+ N KVADFGL+RL + ++ + TA QG + P+ Y + K
Sbjct: 136 DLRAANILVGENLVCKVADFGLARL-IEDNEY--TARQGAKFPIKWTAPEAALYGRFTIK 192
Query: 507 SDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRG 548
SDV+SFG++L E+ T +V + EV +D++ RG
Sbjct: 193 SDVWSFGILLTELTTKGRVPYPGMVNREV------LDQVERG 228
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 107/222 (48%), Gaps = 19/222 (8%)
Query: 331 RLGTGAYGTVYAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGCCI 390
+LG G +G V+ G + VAIK + T S + + E +++ + H L++L
Sbjct: 22 KLGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 80
Query: 391 EEGEPI-LVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHR 449
EE PI +V E+M G+L L+ E G L Y+ MN HR
Sbjct: 81 EE--PIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVER-MN--YVHR 135
Query: 450 DIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTP---GYLDPQYHQYFHLSDK 506
D++++NIL+ N KVADFGL+RL + TA QG + P+ Y + K
Sbjct: 136 DLRAANILVGENLVCKVADFGLARLI---EDNEWTARQGAKFPIKWTAPEAALYGRFTIK 192
Query: 507 SDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRG 548
SDV+SFG++L E+ T +V + EV +D++ RG
Sbjct: 193 SDVWSFGILLTELTTKGRVPYPGMVNREV------LDQVERG 228
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 127/289 (43%), Gaps = 51/289 (17%)
Query: 332 LGTGAYGTVYAGKLHNDD----WVAIKRF-RYRDTDSIDQVMNEIKLLSSVSHPNLLRLL 386
+G G +G VY G L ++D A+K R D + Q + E ++ SHPN+L LL
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 96
Query: 387 GCCIE-EGEPILVYEFMPNGTLCQHLQRER---------GSGLPWXXXXXXXXXXXXXXX 436
G C+ EG P++V +M +G L ++ E G GL
Sbjct: 97 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL----------QVAKGMK 146
Query: 437 YLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTE---SSHISTAPQGTPGYL 493
YL S HRD+ + N +LD + KVADFGL+R + S H T + ++
Sbjct: 147 YLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWM 203
Query: 494 DPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRI-GRGCVDE 552
+ Q + KSDV+SFGV+L E++T + P+ +VN + + + GR
Sbjct: 204 ALESLQTQKFTTKSDVWSFGVLLWELMTR-----GAPPYPDVNTFDITVYLLQGR----R 254
Query: 553 IIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHI 601
++ P P + E+ +C +MRP+ E+ + I
Sbjct: 255 LLQPEYCP----------DPLYEVMLKCWHPKAEMRPSFSELVSRISAI 293
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 109/222 (49%), Gaps = 19/222 (8%)
Query: 331 RLGTGAYGTVYAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGCCI 390
+LG G +G V+ G + VAIK + T S + + E +++ + H L++L
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 391 EEGEPI-LVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHR 449
EE PI +V E+M G L L+ E G L Y+ MN HR
Sbjct: 84 EE--PIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER-MN--YVHR 138
Query: 450 DIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTP---GYLDPQYHQYFHLSDK 506
D++++NIL+ N KVADFGL+RL + ++ + TA QG + P+ Y + K
Sbjct: 139 DLRAANILVGENLVCKVADFGLARL-IEDNEY--TARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 507 SDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRG 548
SDV+SFG++L E+ T +V + EV +D++ RG
Sbjct: 196 SDVWSFGILLTELTTKGRVPYPGMVNREV------LDQVERG 231
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 110/222 (49%), Gaps = 19/222 (8%)
Query: 331 RLGTGAYGTVYAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGCCI 390
+LG G +G V+ G + VAIK + T S + + E +++ + H L++L
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 391 EEGEPI-LVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHR 449
EE PI +V E+M G+L L+ E G L Y+ MN HR
Sbjct: 84 EE--PIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER-MN--YVHR 138
Query: 450 DIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTP---GYLDPQYHQYFHLSDK 506
D++++NIL+ N KVADFGL+RL + ++ + TA QG + P+ Y + K
Sbjct: 139 DLRAANILVGENLVCKVADFGLARL-IEDNEY--TARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 507 SDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRG 548
SDV+SFG++L E+ T +V + EV +D++ RG
Sbjct: 196 SDVWSFGILLTELTTKGRVPYPGMVNREV------LDQVERG 231
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 97/205 (47%), Gaps = 8/205 (3%)
Query: 321 KATSFFSEKHRLGTGAYGTVYAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHP 380
K +F E LGTG +G V GK VAIK + + S D+ + E K++ ++SH
Sbjct: 24 KDLTFLKE---LGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHE 79
Query: 381 NLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHS 440
L++L G C ++ ++ E+M NG L +L RE YL S
Sbjct: 80 KLVQLYGVCTKQRPIFIITEYMANGCLLNYL-REMRHRFQTQQLLEMCKDVCEAMEYLES 138
Query: 441 AMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQY 500
HRD+ + N L++ KV+DFGLSR + + S + + P+ Y
Sbjct: 139 KQ---FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMY 195
Query: 501 FHLSDKSDVYSFGVVLIEIITALKV 525
S KSD+++FGV++ EI + K+
Sbjct: 196 SKFSSKSDIWAFGVLMWEIYSLGKM 220
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 97/205 (47%), Gaps = 8/205 (3%)
Query: 321 KATSFFSEKHRLGTGAYGTVYAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHP 380
K +F E LGTG +G V GK VAIK + + S D+ + E K++ ++SH
Sbjct: 15 KDLTFLKE---LGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHE 70
Query: 381 NLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHS 440
L++L G C ++ ++ E+M NG L +L RE YL S
Sbjct: 71 KLVQLYGVCTKQRPIFIITEYMANGCLLNYL-REMRHRFQTQQLLEMCKDVCEAMEYLES 129
Query: 441 AMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQY 500
HRD+ + N L++ KV+DFGLSR + + S + + P+ Y
Sbjct: 130 K---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMY 186
Query: 501 FHLSDKSDVYSFGVVLIEIITALKV 525
S KSD+++FGV++ EI + K+
Sbjct: 187 SKFSSKSDIWAFGVLMWEIYSLGKM 211
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 99/208 (47%), Gaps = 31/208 (14%)
Query: 332 LGTGAYGTVYAGKLHNDD----WVAIKRF-RYRDTDSIDQVMNEIKLLSSVSHPNLLRLL 386
+G G +G VY G L ++D A+K R D + Q + E ++ SHPN+L LL
Sbjct: 39 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 98
Query: 387 GCCIE-EGEPILVYEFMPNGTLCQHLQRER---------GSGLPWXXXXXXXXXXXXXXX 436
G C+ EG P++V +M +G L ++ E G GL
Sbjct: 99 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL----------QVAKGMK 148
Query: 437 YLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMT---ESSHISTAPQGTPGYL 493
+L S HRD+ + N +LD + KVADFGL+R + +S H T + ++
Sbjct: 149 FLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWM 205
Query: 494 DPQYHQYFHLSDKSDVYSFGVVLIEIIT 521
+ Q + KSDV+SFGV+L E++T
Sbjct: 206 ALESLQTQKFTTKSDVWSFGVLLWELMT 233
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 109/222 (49%), Gaps = 19/222 (8%)
Query: 331 RLGTGAYGTVYAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGCCI 390
+LG G +G V+ G + VAIK + T S + + E +++ + H L++L
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 391 EEGEPI-LVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHR 449
EE PI +V E+M G+L L+ E G L Y+ MN HR
Sbjct: 84 EE--PIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER-MN--YVHR 138
Query: 450 DIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTP---GYLDPQYHQYFHLSDK 506
D+ ++NIL+ N KVADFGL+RL + ++ + TA QG + P+ Y + K
Sbjct: 139 DLAAANILVGENLVCKVADFGLARL-IEDNEY--TARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 507 SDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRG 548
SDV+SFG++L E+ T +V + EV +D++ RG
Sbjct: 196 SDVWSFGILLTELTTKGRVPYPGMVNREV------LDQVERG 231
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 97/205 (47%), Gaps = 8/205 (3%)
Query: 321 KATSFFSEKHRLGTGAYGTVYAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHP 380
K +F E LGTG +G V GK VAIK + + S D+ + E K++ ++SH
Sbjct: 8 KDLTFLKE---LGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHE 63
Query: 381 NLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHS 440
L++L G C ++ ++ E+M NG L +L RE YL S
Sbjct: 64 KLVQLYGVCTKQRPIFIITEYMANGCLLNYL-REMRHRFQTQQLLEMCKDVCEAMEYLES 122
Query: 441 AMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQY 500
HRD+ + N L++ KV+DFGLSR + + S + + P+ Y
Sbjct: 123 K---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMY 179
Query: 501 FHLSDKSDVYSFGVVLIEIITALKV 525
S KSD+++FGV++ EI + K+
Sbjct: 180 SKFSSKSDIWAFGVLMWEIYSLGKM 204
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 97/205 (47%), Gaps = 8/205 (3%)
Query: 321 KATSFFSEKHRLGTGAYGTVYAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHP 380
K +F E LGTG +G V GK VAIK + + S D+ + E K++ ++SH
Sbjct: 4 KDLTFLKE---LGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHE 59
Query: 381 NLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHS 440
L++L G C ++ ++ E+M NG L +L RE YL S
Sbjct: 60 KLVQLYGVCTKQRPIFIITEYMANGCLLNYL-REMRHRFQTQQLLEMCKDVCEAMEYLES 118
Query: 441 AMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQY 500
HRD+ + N L++ KV+DFGLSR + + S + + P+ Y
Sbjct: 119 K---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMY 175
Query: 501 FHLSDKSDVYSFGVVLIEIITALKV 525
S KSD+++FGV++ EI + K+
Sbjct: 176 SKFSSKSDIWAFGVLMWEIYSLGKM 200
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 127/289 (43%), Gaps = 51/289 (17%)
Query: 332 LGTGAYGTVYAGKLHNDD----WVAIKRF-RYRDTDSIDQVMNEIKLLSSVSHPNLLRLL 386
+G G +G VY G L ++D A+K R D + Q + E ++ SHPN+L LL
Sbjct: 30 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 89
Query: 387 GCCIE-EGEPILVYEFMPNGTLCQHLQRER---------GSGLPWXXXXXXXXXXXXXXX 436
G C+ EG P++V +M +G L ++ E G GL
Sbjct: 90 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL----------QVAKGMK 139
Query: 437 YLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTE---SSHISTAPQGTPGYL 493
YL S HRD+ + N +LD + KVADFGL+R + S H T + ++
Sbjct: 140 YLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWM 196
Query: 494 DPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRI-GRGCVDE 552
+ Q + KSDV+SFGV+L E++T + P+ +VN + + + GR
Sbjct: 197 ALESLQTQKFTTKSDVWSFGVLLWELMTR-----GAPPYPDVNTFDITVYLLQGR----R 247
Query: 553 IIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHI 601
++ P P + E+ +C +MRP+ E+ + I
Sbjct: 248 LLQPEYCP----------DPLYEVMLKCWHPKAEMRPSFSELVSRISAI 286
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 127/289 (43%), Gaps = 51/289 (17%)
Query: 332 LGTGAYGTVYAGKLHNDD----WVAIKRF-RYRDTDSIDQVMNEIKLLSSVSHPNLLRLL 386
+G G +G VY G L ++D A+K R D + Q + E ++ SHPN+L LL
Sbjct: 57 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 116
Query: 387 GCCIE-EGEPILVYEFMPNGTLCQHLQRER---------GSGLPWXXXXXXXXXXXXXXX 436
G C+ EG P++V +M +G L ++ E G GL
Sbjct: 117 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL----------QVAKGMK 166
Query: 437 YLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTE---SSHISTAPQGTPGYL 493
YL S HRD+ + N +LD + KVADFGL+R + S H T + ++
Sbjct: 167 YLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWM 223
Query: 494 DPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRI-GRGCVDE 552
+ Q + KSDV+SFGV+L E++T + P+ +VN + + + GR
Sbjct: 224 ALESLQTQKFTTKSDVWSFGVLLWELMTR-----GAPPYPDVNTFDITVYLLQGR----R 274
Query: 553 IIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHI 601
++ P P + E+ +C +MRP+ E+ + I
Sbjct: 275 LLQPEYCP----------DPLYEVMLKCWHPKAEMRPSFSELVSRISAI 313
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 127/289 (43%), Gaps = 51/289 (17%)
Query: 332 LGTGAYGTVYAGKLHNDD----WVAIKRF-RYRDTDSIDQVMNEIKLLSSVSHPNLLRLL 386
+G G +G VY G L ++D A+K R D + Q + E ++ SHPN+L LL
Sbjct: 56 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 115
Query: 387 GCCIE-EGEPILVYEFMPNGTLCQHLQRER---------GSGLPWXXXXXXXXXXXXXXX 436
G C+ EG P++V +M +G L ++ E G GL
Sbjct: 116 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL----------QVAKGMK 165
Query: 437 YLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTE---SSHISTAPQGTPGYL 493
YL S HRD+ + N +LD + KVADFGL+R + S H T + ++
Sbjct: 166 YLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWM 222
Query: 494 DPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRI-GRGCVDE 552
+ Q + KSDV+SFGV+L E++T + P+ +VN + + + GR
Sbjct: 223 ALESLQTQKFTTKSDVWSFGVLLWELMTR-----GAPPYPDVNTFDITVYLLQGR----R 273
Query: 553 IIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHI 601
++ P P + E+ +C +MRP+ E+ + I
Sbjct: 274 LLQPEYCP----------DPLYEVMLKCWHPKAEMRPSFSELVSRISAI 312
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 127/289 (43%), Gaps = 51/289 (17%)
Query: 332 LGTGAYGTVYAGKLHNDD----WVAIKRF-RYRDTDSIDQVMNEIKLLSSVSHPNLLRLL 386
+G G +G VY G L ++D A+K R D + Q + E ++ SHPN+L LL
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 387 GCCIE-EGEPILVYEFMPNGTLCQHLQRER---------GSGLPWXXXXXXXXXXXXXXX 436
G C+ EG P++V +M +G L ++ E G GL
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL----------QVAKGMK 147
Query: 437 YLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTE---SSHISTAPQGTPGYL 493
YL S HRD+ + N +LD + KVADFGL+R + S H T + ++
Sbjct: 148 YLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWM 204
Query: 494 DPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRI-GRGCVDE 552
+ Q + KSDV+SFGV+L E++T + P+ +VN + + + GR
Sbjct: 205 ALESLQTQKFTTKSDVWSFGVLLWELMTR-----GAPPYPDVNTFDITVYLLQGR----R 255
Query: 553 IIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHI 601
++ P P + E+ +C +MRP+ E+ + I
Sbjct: 256 LLQPEYCP----------DPLYEVMLKCWHPKAEMRPSFSELVSRISAI 294
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 109/222 (49%), Gaps = 19/222 (8%)
Query: 331 RLGTGAYGTVYAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGCCI 390
+LG G +G V+ G + VAIK + T S + + E +++ + H L++L
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 391 EEGEPI-LVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHR 449
EE PI +V E+M G L L+ E G L Y+ MN HR
Sbjct: 84 EE--PIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER-MN--YVHR 138
Query: 450 DIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTP---GYLDPQYHQYFHLSDK 506
D++++NIL+ N KVADFGL+RL + ++ + TA QG + P+ Y + K
Sbjct: 139 DLRAANILVGENLVCKVADFGLARL-IEDNEY--TARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 507 SDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRG 548
SDV+SFG++L E+ T +V + EV +D++ RG
Sbjct: 196 SDVWSFGILLTELTTKGRVPYPGMVNREV------LDQVERG 231
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 97/205 (47%), Gaps = 8/205 (3%)
Query: 321 KATSFFSEKHRLGTGAYGTVYAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHP 380
K +F E LGTG +G V GK VAIK + + S D+ + E K++ ++SH
Sbjct: 9 KDLTFLKE---LGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHE 64
Query: 381 NLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHS 440
L++L G C ++ ++ E+M NG L +L RE YL S
Sbjct: 65 KLVQLYGVCTKQRPIFIITEYMANGCLLNYL-REMRHRFQTQQLLEMCKDVCEAMEYLES 123
Query: 441 AMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQY 500
HRD+ + N L++ KV+DFGLSR + + S + + P+ Y
Sbjct: 124 K---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMY 180
Query: 501 FHLSDKSDVYSFGVVLIEIITALKV 525
S KSD+++FGV++ EI + K+
Sbjct: 181 SKFSSKSDIWAFGVLMWEIYSLGKM 205
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 97/205 (47%), Gaps = 8/205 (3%)
Query: 321 KATSFFSEKHRLGTGAYGTVYAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHP 380
K +F E LGTG +G V GK VAIK + + S D+ + E K++ ++SH
Sbjct: 9 KDLTFLKE---LGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHE 64
Query: 381 NLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHS 440
L++L G C ++ ++ E+M NG L +L RE YL S
Sbjct: 65 KLVQLYGVCTKQRPIFIITEYMANGCLLNYL-REMRHRFQTQQLLEMCKDVCEAMEYLES 123
Query: 441 AMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQY 500
HRD+ + N L++ KV+DFGLSR + + S + + P+ Y
Sbjct: 124 K---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVRWSPPEVLMY 180
Query: 501 FHLSDKSDVYSFGVVLIEIITALKV 525
S KSD+++FGV++ EI + K+
Sbjct: 181 SKFSSKSDIWAFGVLMWEIYSLGKM 205
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 109/222 (49%), Gaps = 19/222 (8%)
Query: 331 RLGTGAYGTVYAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGCCI 390
+LG G +G V+ G + VAIK + + S + + E +++ + H L++L
Sbjct: 192 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGNM-SPEAFLQEAQVMKKLRHEKLVQLYAVVS 250
Query: 391 EEGEPI-LVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHR 449
EE PI +V E+M G+L L+ E G L Y+ MN HR
Sbjct: 251 EE--PIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER-MN--YVHR 305
Query: 450 DIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTP---GYLDPQYHQYFHLSDK 506
D++++NIL+ N KVADFGL RL + ++ + TA QG + P+ Y + K
Sbjct: 306 DLRAANILVGENLVCKVADFGLGRL-IEDNEY--TARQGAKFPIKWTAPEAALYGRFTIK 362
Query: 507 SDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRG 548
SDV+SFG++L E+ T +V + EV +D++ RG
Sbjct: 363 SDVWSFGILLTELTTKGRVPYPGMVNREV------LDQVERG 398
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 127/289 (43%), Gaps = 51/289 (17%)
Query: 332 LGTGAYGTVYAGKLHNDD----WVAIKRF-RYRDTDSIDQVMNEIKLLSSVSHPNLLRLL 386
+G G +G VY G L ++D A+K R D + Q + E ++ SHPN+L LL
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 95
Query: 387 GCCIE-EGEPILVYEFMPNGTLCQHLQRER---------GSGLPWXXXXXXXXXXXXXXX 436
G C+ EG P++V +M +G L ++ E G GL
Sbjct: 96 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL----------QVAKGMK 145
Query: 437 YLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTE---SSHISTAPQGTPGYL 493
YL S HRD+ + N +LD + KVADFGL+R + S H T + ++
Sbjct: 146 YLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWM 202
Query: 494 DPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRI-GRGCVDE 552
+ Q + KSDV+SFGV+L E++T + P+ +VN + + + GR
Sbjct: 203 ALESLQTQKFTTKSDVWSFGVLLWELMTR-----GAPPYPDVNTFDITVYLLQGR----R 253
Query: 553 IIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHI 601
++ P P + E+ +C +MRP+ E+ + I
Sbjct: 254 LLQPEYCP----------DPLYEVMLKCWHPKAEMRPSFSELVSRISAI 292
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 127/289 (43%), Gaps = 51/289 (17%)
Query: 332 LGTGAYGTVYAGKLHNDD----WVAIKRF-RYRDTDSIDQVMNEIKLLSSVSHPNLLRLL 386
+G G +G VY G L ++D A+K R D + Q + E ++ SHPN+L LL
Sbjct: 35 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 94
Query: 387 GCCIE-EGEPILVYEFMPNGTLCQHLQRER---------GSGLPWXXXXXXXXXXXXXXX 436
G C+ EG P++V +M +G L ++ E G GL
Sbjct: 95 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL----------QVAKGMK 144
Query: 437 YLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTE---SSHISTAPQGTPGYL 493
YL S HRD+ + N +LD + KVADFGL+R + S H T + ++
Sbjct: 145 YLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWM 201
Query: 494 DPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRI-GRGCVDE 552
+ Q + KSDV+SFGV+L E++T + P+ +VN + + + GR
Sbjct: 202 ALESLQTQKFTTKSDVWSFGVLLWELMTR-----GAPPYPDVNTFDITVYLLQGR----R 252
Query: 553 IIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHI 601
++ P P + E+ +C +MRP+ E+ + I
Sbjct: 253 LLQPEYCP----------DPLYEVMLKCWHPKAEMRPSFSELVSRISAI 291
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 127/289 (43%), Gaps = 51/289 (17%)
Query: 332 LGTGAYGTVYAGKLHNDD----WVAIKRF-RYRDTDSIDQVMNEIKLLSSVSHPNLLRLL 386
+G G +G VY G L ++D A+K R D + Q + E ++ SHPN+L LL
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 387 GCCIE-EGEPILVYEFMPNGTLCQHLQRER---------GSGLPWXXXXXXXXXXXXXXX 436
G C+ EG P++V +M +G L ++ E G GL
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL----------QVAKGMK 147
Query: 437 YLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTE---SSHISTAPQGTPGYL 493
YL S HRD+ + N +LD + KVADFGL+R + S H T + ++
Sbjct: 148 YLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWM 204
Query: 494 DPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRI-GRGCVDE 552
+ Q + KSDV+SFGV+L E++T + P+ +VN + + + GR
Sbjct: 205 ALESLQTQKFTTKSDVWSFGVLLWELMTR-----GAPPYPDVNTFDITVYLLQGR----R 255
Query: 553 IIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHI 601
++ P P + E+ +C +MRP+ E+ + I
Sbjct: 256 LLQPEYCP----------DPLYEVMLKCWHPKAEMRPSFSELVSRISAI 294
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 127/289 (43%), Gaps = 51/289 (17%)
Query: 332 LGTGAYGTVYAGKLHNDD----WVAIKRF-RYRDTDSIDQVMNEIKLLSSVSHPNLLRLL 386
+G G +G VY G L ++D A+K R D + Q + E ++ SHPN+L LL
Sbjct: 33 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 92
Query: 387 GCCIE-EGEPILVYEFMPNGTLCQHLQRER---------GSGLPWXXXXXXXXXXXXXXX 436
G C+ EG P++V +M +G L ++ E G GL
Sbjct: 93 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL----------QVAKGMK 142
Query: 437 YLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTE---SSHISTAPQGTPGYL 493
YL S HRD+ + N +LD + KVADFGL+R + S H T + ++
Sbjct: 143 YLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWM 199
Query: 494 DPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRI-GRGCVDE 552
+ Q + KSDV+SFGV+L E++T + P+ +VN + + + GR
Sbjct: 200 ALESLQTQKFTTKSDVWSFGVLLWELMTR-----GAPPYPDVNTFDITVYLLQGR----R 250
Query: 553 IIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHI 601
++ P P + E+ +C +MRP+ E+ + I
Sbjct: 251 LLQPEYCP----------DPLYEVMLKCWHPKAEMRPSFSELVSRISAI 289
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 127/289 (43%), Gaps = 51/289 (17%)
Query: 332 LGTGAYGTVYAGKLHNDD----WVAIKRF-RYRDTDSIDQVMNEIKLLSSVSHPNLLRLL 386
+G G +G VY G L ++D A+K R D + Q + E ++ SHPN+L LL
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 96
Query: 387 GCCIE-EGEPILVYEFMPNGTLCQHLQRER---------GSGLPWXXXXXXXXXXXXXXX 436
G C+ EG P++V +M +G L ++ E G GL
Sbjct: 97 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL----------QVAKGMK 146
Query: 437 YLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTE---SSHISTAPQGTPGYL 493
YL S HRD+ + N +LD + KVADFGL+R + S H T + ++
Sbjct: 147 YLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWM 203
Query: 494 DPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRI-GRGCVDE 552
+ Q + KSDV+SFGV+L E++T + P+ +VN + + + GR
Sbjct: 204 ALESLQTQKFTTKSDVWSFGVLLWELMTR-----GAPPYPDVNTFDITVYLLQGR----R 254
Query: 553 IIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHI 601
++ P P + E+ +C +MRP+ E+ + I
Sbjct: 255 LLQPEYCP----------DPLYEVMLKCWHPKAEMRPSFSELVSRISAI 293
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 127/289 (43%), Gaps = 51/289 (17%)
Query: 332 LGTGAYGTVYAGKLHNDD----WVAIKRF-RYRDTDSIDQVMNEIKLLSSVSHPNLLRLL 386
+G G +G VY G L ++D A+K R D + Q + E ++ SHPN+L LL
Sbjct: 97 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 156
Query: 387 GCCIE-EGEPILVYEFMPNGTLCQHLQRER---------GSGLPWXXXXXXXXXXXXXXX 436
G C+ EG P++V +M +G L ++ E G GL
Sbjct: 157 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL----------QVAKGMK 206
Query: 437 YLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMT---ESSHISTAPQGTPGYL 493
+L S HRD+ + N +LD + KVADFGL+R +S H T + ++
Sbjct: 207 FLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWM 263
Query: 494 DPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRI-GRGCVDE 552
+ Q + KSDV+SFGV+L E++T + P+ +VN + + + GR
Sbjct: 264 ALESLQTQKFTTKSDVWSFGVLLWELMTR-----GAPPYPDVNTFDITVYLLQGR----R 314
Query: 553 IIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHI 601
++ P P + E+ +C +MRP+ E+ + I
Sbjct: 315 LLQPEYCP----------DPLYEVMLKCWHPKAEMRPSFSELVSRISAI 353
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 90/193 (46%), Gaps = 7/193 (3%)
Query: 330 HRLGTGAYGTVYAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGCC 389
RLG G +G V+ G + VA+K + + + S D + E L+ + H L+RL
Sbjct: 19 ERLGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 77
Query: 390 IEEGEPI-LVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYH 448
+E PI ++ E+M NG+L L+ G L ++ H
Sbjct: 78 TQE--PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIH 132
Query: 449 RDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLSDKSD 508
RD++++NIL+ K+ADFGL+RL + + P+ Y + KSD
Sbjct: 133 RDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSD 192
Query: 509 VYSFGVVLIEIIT 521
V+SFG++L EI+T
Sbjct: 193 VWSFGILLTEIVT 205
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 90/193 (46%), Gaps = 7/193 (3%)
Query: 330 HRLGTGAYGTVYAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGCC 389
RLG G +G V+ G + VA+K + + + S D + E L+ + H L+RL
Sbjct: 20 ERLGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 78
Query: 390 IEEGEPI-LVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYH 448
+E PI ++ E+M NG+L L+ G L ++ H
Sbjct: 79 TQE--PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIH 133
Query: 449 RDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLSDKSD 508
RD++++NIL+ K+ADFGL+RL + + P+ Y + KSD
Sbjct: 134 RDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSD 193
Query: 509 VYSFGVVLIEIIT 521
V+SFG++L EI+T
Sbjct: 194 VWSFGILLTEIVT 206
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 90/193 (46%), Gaps = 7/193 (3%)
Query: 330 HRLGTGAYGTVYAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGCC 389
RLG G +G V+ G + VA+K + + + S D + E L+ + H L+RL
Sbjct: 21 ERLGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 79
Query: 390 IEEGEPI-LVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYH 448
+E PI ++ E+M NG+L L+ G L ++ H
Sbjct: 80 TQE--PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIH 134
Query: 449 RDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLSDKSD 508
RD++++NIL+ K+ADFGL+RL + + P+ Y + KSD
Sbjct: 135 RDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSD 194
Query: 509 VYSFGVVLIEIIT 521
V+SFG++L EI+T
Sbjct: 195 VWSFGILLTEIVT 207
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 90/193 (46%), Gaps = 7/193 (3%)
Query: 330 HRLGTGAYGTVYAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGCC 389
RLG G +G V+ G + VA+K + + + S D + E L+ + H L+RL
Sbjct: 27 ERLGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 85
Query: 390 IEEGEPI-LVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYH 448
+E PI ++ E+M NG+L L+ G L ++ H
Sbjct: 86 TQE--PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIH 140
Query: 449 RDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLSDKSD 508
RD++++NIL+ K+ADFGL+RL + + P+ Y + KSD
Sbjct: 141 RDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSD 200
Query: 509 VYSFGVVLIEIIT 521
V+SFG++L EI+T
Sbjct: 201 VWSFGILLTEIVT 213
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 127/289 (43%), Gaps = 51/289 (17%)
Query: 332 LGTGAYGTVYAGKLHNDD----WVAIKRF-RYRDTDSIDQVMNEIKLLSSVSHPNLLRLL 386
+G G +G VY G L ++D A+K R D + Q + E ++ SHPN+L LL
Sbjct: 39 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 98
Query: 387 GCCIE-EGEPILVYEFMPNGTLCQHLQRER---------GSGLPWXXXXXXXXXXXXXXX 436
G C+ EG P++V +M +G L ++ E G GL
Sbjct: 99 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL----------QVAKGMK 148
Query: 437 YLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMT---ESSHISTAPQGTPGYL 493
+L S HRD+ + N +LD + KVADFGL+R +S H T + ++
Sbjct: 149 FLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWM 205
Query: 494 DPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRI-GRGCVDE 552
+ Q + KSDV+SFGV+L E++T + P+ +VN + + + GR
Sbjct: 206 ALESLQTQKFTTKSDVWSFGVLLWELMTR-----GAPPYPDVNTFDITVYLLQGR----R 256
Query: 553 IIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHI 601
++ P P + E+ +C +MRP+ E+ + I
Sbjct: 257 LLQPEYCP----------DPLYEVMLKCWHPKAEMRPSFSELVSRISAI 295
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 90/193 (46%), Gaps = 7/193 (3%)
Query: 330 HRLGTGAYGTVYAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGCC 389
RLG G +G V+ G + VA+K + + + S D + E L+ + H L+RL
Sbjct: 25 ERLGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 83
Query: 390 IEEGEPI-LVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYH 448
+E PI ++ E+M NG+L L+ G L ++ H
Sbjct: 84 TQE--PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIH 138
Query: 449 RDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLSDKSD 508
RD++++NIL+ K+ADFGL+RL + + P+ Y + KSD
Sbjct: 139 RDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSD 198
Query: 509 VYSFGVVLIEIIT 521
V+SFG++L EI+T
Sbjct: 199 VWSFGILLTEIVT 211
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 90/193 (46%), Gaps = 7/193 (3%)
Query: 330 HRLGTGAYGTVYAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGCC 389
RLG G +G V+ G + VA+K + + + S D + E L+ + H L+RL
Sbjct: 28 ERLGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 86
Query: 390 IEEGEPI-LVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYH 448
+E PI ++ E+M NG+L L+ G L ++ H
Sbjct: 87 TQE--PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIH 141
Query: 449 RDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLSDKSD 508
RD++++NIL+ K+ADFGL+RL + + P+ Y + KSD
Sbjct: 142 RDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSD 201
Query: 509 VYSFGVVLIEIIT 521
V+SFG++L EI+T
Sbjct: 202 VWSFGILLTEIVT 214
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 98/208 (47%), Gaps = 31/208 (14%)
Query: 332 LGTGAYGTVYAGKLHNDD----WVAIKRF-RYRDTDSIDQVMNEIKLLSSVSHPNLLRLL 386
+G G +G VY G L ++D A+K R D + Q + E ++ SHPN+L LL
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 387 GCCIE-EGEPILVYEFMPNGTLCQHLQRER---------GSGLPWXXXXXXXXXXXXXXX 436
G C+ EG P++V +M +G L ++ E G GL
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL----------QVAKGMK 147
Query: 437 YLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMT---ESSHISTAPQGTPGYL 493
+L S HRD+ + N +LD + KVADFGL+R +S H T + ++
Sbjct: 148 FLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWM 204
Query: 494 DPQYHQYFHLSDKSDVYSFGVVLIEIIT 521
+ Q + KSDV+SFGV+L E++T
Sbjct: 205 ALESLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 90/193 (46%), Gaps = 7/193 (3%)
Query: 330 HRLGTGAYGTVYAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGCC 389
RLG G +G V+ G + VA+K + + + S D + E L+ + H L+RL
Sbjct: 14 ERLGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 72
Query: 390 IEEGEPI-LVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYH 448
+E PI ++ E+M NG+L L+ G L ++ H
Sbjct: 73 TQE--PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIH 127
Query: 449 RDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLSDKSD 508
RD++++NIL+ K+ADFGL+RL + + P+ Y + KSD
Sbjct: 128 RDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSD 187
Query: 509 VYSFGVVLIEIIT 521
V+SFG++L EI+T
Sbjct: 188 VWSFGILLTEIVT 200
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 127/289 (43%), Gaps = 51/289 (17%)
Query: 332 LGTGAYGTVYAGKLHNDD----WVAIKRF-RYRDTDSIDQVMNEIKLLSSVSHPNLLRLL 386
+G G +G VY G L ++D A+K R D + Q + E ++ SHPN+L LL
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 387 GCCIE-EGEPILVYEFMPNGTLCQHLQRER---------GSGLPWXXXXXXXXXXXXXXX 436
G C+ EG P++V +M +G L ++ E G GL
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL----------QVAKGMK 147
Query: 437 YLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMT---ESSHISTAPQGTPGYL 493
+L S HRD+ + N +LD + KVADFGL+R +S H T + ++
Sbjct: 148 FLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWM 204
Query: 494 DPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRI-GRGCVDE 552
+ Q + KSDV+SFGV+L E++T + P+ +VN + + + GR
Sbjct: 205 ALESLQTQKFTTKSDVWSFGVLLWELMTR-----GAPPYPDVNTFDITVYLLQGR----R 255
Query: 553 IIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHI 601
++ P P + E+ +C +MRP+ E+ + I
Sbjct: 256 LLQPEYCP----------DPLYEVMLKCWHPKAEMRPSFSELVSRISAI 294
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 90/193 (46%), Gaps = 7/193 (3%)
Query: 330 HRLGTGAYGTVYAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGCC 389
RLG G +G V+ G + VA+K + + + S D + E L+ + H L+RL
Sbjct: 19 ERLGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 77
Query: 390 IEEGEPI-LVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYH 448
+E PI ++ E+M NG+L L+ G L ++ H
Sbjct: 78 TQE--PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIH 132
Query: 449 RDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLSDKSD 508
RD++++NIL+ K+ADFGL+RL + + P+ Y + KSD
Sbjct: 133 RDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSD 192
Query: 509 VYSFGVVLIEIIT 521
V+SFG++L EI+T
Sbjct: 193 VWSFGILLTEIVT 205
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 98/208 (47%), Gaps = 31/208 (14%)
Query: 332 LGTGAYGTVYAGKLHNDD----WVAIKRF-RYRDTDSIDQVMNEIKLLSSVSHPNLLRLL 386
+G G +G VY G L ++D A+K R D + Q + E ++ SHPN+L LL
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 95
Query: 387 GCCIE-EGEPILVYEFMPNGTLCQHLQRER---------GSGLPWXXXXXXXXXXXXXXX 436
G C+ EG P++V +M +G L ++ E G GL
Sbjct: 96 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL----------QVAKGMK 145
Query: 437 YLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMT---ESSHISTAPQGTPGYL 493
+L S HRD+ + N +LD + KVADFGL+R +S H T + ++
Sbjct: 146 FLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWM 202
Query: 494 DPQYHQYFHLSDKSDVYSFGVVLIEIIT 521
+ Q + KSDV+SFGV+L E++T
Sbjct: 203 ALESLQTQKFTTKSDVWSFGVLLWELMT 230
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 103/209 (49%), Gaps = 23/209 (11%)
Query: 329 KHRLGTGAYGTVYAGKLHNDD-WVAIKRFRYRDTD-------SIDQVMNEIKLLSSVSHP 380
+ ++G G +G V+ G+L D VAIK D++ + E+ ++S+++HP
Sbjct: 24 EKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHP 83
Query: 381 NLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHS 440
N+++L G P +V EF+P G L L ++ + W Y+ +
Sbjct: 84 NIVKLYGLM--HNPPRMVMEFVPCGDLYHRL-LDKAHPIKWSVKLRLMLDIALGIEYMQN 140
Query: 441 AMNPPIYHRDIKSSNIL---LDYNYR--SKVADFGLSRLGMTESSHISTAPQGTPGYLDP 495
NPPI HRD++S NI LD N +KVADFGLS+ +S H + G ++ P
Sbjct: 141 Q-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ----QSVHSVSGLLGNFQWMAP 195
Query: 496 QY--HQYFHLSDKSDVYSFGVVLIEIITA 522
+ + ++K+D YSF ++L I+T
Sbjct: 196 ETIGAEEESYTEKADTYSFAMILYTILTG 224
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 98/208 (47%), Gaps = 31/208 (14%)
Query: 332 LGTGAYGTVYAGKLHNDD----WVAIKRF-RYRDTDSIDQVMNEIKLLSSVSHPNLLRLL 386
+G G +G VY G L ++D A+K R D + Q + E ++ SHPN+L LL
Sbjct: 43 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 102
Query: 387 GCCIE-EGEPILVYEFMPNGTLCQHLQRER---------GSGLPWXXXXXXXXXXXXXXX 436
G C+ EG P++V +M +G L ++ E G GL
Sbjct: 103 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL----------QVAKGMK 152
Query: 437 YLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMT---ESSHISTAPQGTPGYL 493
+L S HRD+ + N +LD + KVADFGL+R +S H T + ++
Sbjct: 153 FLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWM 209
Query: 494 DPQYHQYFHLSDKSDVYSFGVVLIEIIT 521
+ Q + KSDV+SFGV+L E++T
Sbjct: 210 ALESLQTQKFTTKSDVWSFGVLLWELMT 237
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 90/193 (46%), Gaps = 7/193 (3%)
Query: 330 HRLGTGAYGTVYAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGCC 389
RLG G +G V+ G + VA+K + + + S D + E L+ + H L+RL
Sbjct: 19 ERLGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 77
Query: 390 IEEGEPI-LVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYH 448
+E PI ++ E+M NG+L L+ G L ++ H
Sbjct: 78 TQE--PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIH 132
Query: 449 RDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLSDKSD 508
RD++++NIL+ K+ADFGL+RL + + P+ Y + KSD
Sbjct: 133 RDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSD 192
Query: 509 VYSFGVVLIEIIT 521
V+SFG++L EI+T
Sbjct: 193 VWSFGILLTEIVT 205
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 90/193 (46%), Gaps = 7/193 (3%)
Query: 330 HRLGTGAYGTVYAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGCC 389
RLG G +G V+ G + VA+K + + + S D + E L+ + H L+RL
Sbjct: 25 ERLGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 83
Query: 390 IEEGEPI-LVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYH 448
+E PI ++ E+M NG+L L+ G L ++ H
Sbjct: 84 TQE--PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIH 138
Query: 449 RDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLSDKSD 508
RD++++NIL+ K+ADFGL+RL + + P+ Y + KSD
Sbjct: 139 RDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSD 198
Query: 509 VYSFGVVLIEIIT 521
V+SFG++L EI+T
Sbjct: 199 VWSFGILLTEIVT 211
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 90/193 (46%), Gaps = 7/193 (3%)
Query: 330 HRLGTGAYGTVYAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGCC 389
RLG G +G V+ G + VA+K + + + S D + E L+ + H L+RL
Sbjct: 24 ERLGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 82
Query: 390 IEEGEPI-LVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYH 448
+E PI ++ E+M NG+L L+ G L ++ H
Sbjct: 83 TQE--PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIH 137
Query: 449 RDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLSDKSD 508
RD++++NIL+ K+ADFGL+RL + + P+ Y + KSD
Sbjct: 138 RDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSD 197
Query: 509 VYSFGVVLIEIIT 521
V+SFG++L EI+T
Sbjct: 198 VWSFGILLTEIVT 210
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 90/193 (46%), Gaps = 7/193 (3%)
Query: 330 HRLGTGAYGTVYAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGCC 389
RLG G +G V+ G + VA+K + + + S D + E L+ + H L+RL
Sbjct: 29 ERLGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 87
Query: 390 IEEGEPI-LVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYH 448
+E PI ++ E+M NG+L L+ G L ++ H
Sbjct: 88 TQE--PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIH 142
Query: 449 RDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLSDKSD 508
RD++++NIL+ K+ADFGL+RL + + P+ Y + KSD
Sbjct: 143 RDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSD 202
Query: 509 VYSFGVVLIEIIT 521
V+SFG++L EI+T
Sbjct: 203 VWSFGILLTEIVT 215
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 96/208 (46%), Gaps = 9/208 (4%)
Query: 315 PYKEIEKATSFFSEKHRLGTGAYGTVYAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLL 374
P E+ + T E RLG G +G V+ G + VA+K + + + S D + E L+
Sbjct: 2 PEWEVPRETLKLVE--RLGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLM 58
Query: 375 SSVSHPNLLRLLGCCIEEGEPI-LVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXX 433
+ H L+RL +E PI ++ E+M NG+L L+ G L
Sbjct: 59 KQLQHQRLVRLYAVVTQE--PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 116
Query: 434 XXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYL 493
++ HR+++++NIL+ K+ADFGL+RL + +
Sbjct: 117 GMAFIEER---NYIHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWT 173
Query: 494 DPQYHQYFHLSDKSDVYSFGVVLIEIIT 521
P+ Y + KSDV+SFG++L EI+T
Sbjct: 174 APEAINYGTFTIKSDVWSFGILLTEIVT 201
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 89/193 (46%), Gaps = 7/193 (3%)
Query: 330 HRLGTGAYGTVYAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGCC 389
RLG G G V+ G + VA+K + + + S D + E L+ + H L+RL
Sbjct: 19 ERLGAGQAGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 77
Query: 390 IEEGEPI-LVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYH 448
+E PI ++ E+M NG+L L+ G L ++ H
Sbjct: 78 TQE--PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIH 132
Query: 449 RDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLSDKSD 508
RD++++NIL+ K+ADFGL+RL + + P+ Y + KSD
Sbjct: 133 RDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPEAINYGTFTIKSD 192
Query: 509 VYSFGVVLIEIIT 521
V+SFG++L EI+T
Sbjct: 193 VWSFGILLTEIVT 205
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 92/203 (45%), Gaps = 18/203 (8%)
Query: 332 LGTGAYG-TVYAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGCCI 390
LG G +G + + + +K D ++ + E+K++ + HPN+L+ +G
Sbjct: 18 LGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLY 77
Query: 391 EEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRD 450
++ + E++ GTL + + + S PW YLHS MN I HRD
Sbjct: 78 KDKRLNFITEYIKGGTL-RGIIKSMDSQYPWSQRVSFAKDIASGMAYLHS-MN--IIHRD 133
Query: 451 IKSSNILLDYNYRSKVADFGLSRLGMTESSHIS-----TAPQ--------GTPGYLDPQY 497
+ S N L+ N VADFGL+RL + E + P G P ++ P+
Sbjct: 134 LNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEM 193
Query: 498 HQYFHLSDKSDVYSFGVVLIEII 520
+K DV+SFG+VL EII
Sbjct: 194 INGRSYDEKVDVFSFGIVLCEII 216
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 102/209 (48%), Gaps = 23/209 (11%)
Query: 329 KHRLGTGAYGTVYAGKLHNDD-WVAIKRFRYRDTD-------SIDQVMNEIKLLSSVSHP 380
+ ++G G +G V+ G+L D VAIK D++ + E+ ++S+++HP
Sbjct: 24 EKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHP 83
Query: 381 NLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHS 440
N+++L G P +V EF+P G L L ++ + W Y+ +
Sbjct: 84 NIVKLYGLM--HNPPRMVMEFVPCGDLYHRL-LDKAHPIKWSVKLRLMLDIALGIEYMQN 140
Query: 441 AMNPPIYHRDIKSSNIL---LDYNYR--SKVADFGLSRLGMTESSHISTAPQGTPGYLDP 495
NPPI HRD++S NI LD N +KVADFG S+ +S H + G ++ P
Sbjct: 141 Q-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ----QSVHSVSGLLGNFQWMAP 195
Query: 496 QY--HQYFHLSDKSDVYSFGVVLIEIITA 522
+ + ++K+D YSF ++L I+T
Sbjct: 196 ETIGAEEESYTEKADTYSFAMILYTILTG 224
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 102/209 (48%), Gaps = 23/209 (11%)
Query: 329 KHRLGTGAYGTVYAGKLHNDD-WVAIKRFRYRDTD-------SIDQVMNEIKLLSSVSHP 380
+ ++G G +G V+ G+L D VAIK D++ + E+ ++S+++HP
Sbjct: 24 EKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHP 83
Query: 381 NLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHS 440
N+++L G P +V EF+P G L L ++ + W Y+ +
Sbjct: 84 NIVKLYGLM--HNPPRMVMEFVPCGDLYHRL-LDKAHPIKWSVKLRLMLDIALGIEYMQN 140
Query: 441 AMNPPIYHRDIKSSNIL---LDYNYR--SKVADFGLSRLGMTESSHISTAPQGTPGYLDP 495
NPPI HRD++S NI LD N +KVADF LS+ +S H + G ++ P
Sbjct: 141 Q-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ----QSVHSVSGLLGNFQWMAP 195
Query: 496 QY--HQYFHLSDKSDVYSFGVVLIEIITA 522
+ + ++K+D YSF ++L I+T
Sbjct: 196 ETIGAEEESYTEKADTYSFAMILYTILTG 224
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 97/199 (48%), Gaps = 14/199 (7%)
Query: 332 LGTGAYGTVYAGKLHNDDW-----VAIKRFR--YRDTDSIDQVMNEIKLLSSVSHPNLLR 384
+G G +G VY G L VAIK + Y + +D + E ++ SH N++R
Sbjct: 52 IGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVD-FLGEAGIMGQFSHHNIIR 110
Query: 385 LLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNP 444
L G + +++ E+M NG L + L RE+ YL + MN
Sbjct: 111 LEGVISKYKPMMIITEYMENGALDKFL-REKDGEFSVLQLVGMLRGIAAGMKYL-ANMN- 167
Query: 445 PIYHRDIKSSNILLDYNYRSKVADFGLSRL--GMTESSHISTAPQGTPGYLDPQYHQYFH 502
HRD+ + NIL++ N KV+DFGLSR+ E+++ ++ + + P+ Y
Sbjct: 168 -YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRK 226
Query: 503 LSDKSDVYSFGVVLIEIIT 521
+ SDV+SFG+V+ E++T
Sbjct: 227 FTSASDVWSFGIVMWEVMT 245
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 94/194 (48%), Gaps = 7/194 (3%)
Query: 329 KHRLGTGAYGTVYAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGC 388
+ +LG G +G V+ + VA+K + + S++ + E ++ ++ H L++L
Sbjct: 20 EKKLGAGQFGEVWMATYNKHTKVAVKTMK-PGSMSVEAFLAEANVMKTLQHDKLVKLHAV 78
Query: 389 CIEEGEPI-LVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIY 447
+E PI ++ EFM G+L L+ + GS P ++
Sbjct: 79 VTKE--PIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN---YI 133
Query: 448 HRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLSDKS 507
HRD++++NIL+ + K+ADFGL+R+ + + P+ + + KS
Sbjct: 134 HRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKS 193
Query: 508 DVYSFGVVLIEIIT 521
DV+SFG++L+EI+T
Sbjct: 194 DVWSFGILLMEIVT 207
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 124/273 (45%), Gaps = 31/273 (11%)
Query: 332 LGTGAYGTVYAGKLHNDDWVAIKRFRYRDTDSIDQV-MNEIKLLSSVSHPNLLRLLGCCI 390
+G G +G V G + VA+K + D+ Q + E +++ + H NL++LLG +
Sbjct: 20 IGKGEFGDVMLGDYRGNK-VAVKCIK---NDATAQAFLAEASVMTQLRHSNLVQLLGVIV 75
Query: 391 EE-GEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHR 449
EE G +V E+M G+L +L+ S L YL HR
Sbjct: 76 EEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHR 132
Query: 450 DIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLSDKSDV 509
D+ + N+L+ + +KV+DFGL++ E+S + + P+ + S KSDV
Sbjct: 133 DLAARNVLVSEDNVAKVSDFGLTK----EASSTQDTGKLPVKWTAPEALREAAFSTKSDV 188
Query: 510 YSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLEPHRDAWTLSS 569
+SFG++L EI + +V P+ + L + + R+ +G + D
Sbjct: 189 WSFGILLWEIYSFGRV-----PYPRIPLKDV-VPRVEKGYKMDAPD------------GC 230
Query: 570 IHNVAELAFRCLAFHRDMRPTMMEVAEELEHIR 602
V E+ C MRP+ +++ E+LEHI+
Sbjct: 231 PPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIK 263
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 99/195 (50%), Gaps = 9/195 (4%)
Query: 329 KHRLGTGAYGTVYAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGC 388
+ +LG G +G V+ + VA+K + + S++ + E ++ ++ H L++L
Sbjct: 193 EKKLGAGQFGEVWMATYNKHTKVAVKTMK-PGSMSVEAFLAEANVMKTLQHDKLVKLHAV 251
Query: 389 CIEEGEPI-LVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIY 447
+E PI ++ EFM G+L L+ + GS P ++
Sbjct: 252 VTKE--PIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN---YI 306
Query: 448 HRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTP-GYLDPQYHQYFHLSDK 506
HRD++++NIL+ + K+ADFGL+R+ + ++ + + P + P+ + + K
Sbjct: 307 HRDLRAANILVSASLVCKIADFGLARV-IEDNEYTAREGAKFPIKWTAPEAINFGSFTIK 365
Query: 507 SDVYSFGVVLIEIIT 521
SDV+SFG++L+EI+T
Sbjct: 366 SDVWSFGILLMEIVT 380
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 96/194 (49%), Gaps = 17/194 (8%)
Query: 329 KHRLGTGAYGTVYAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGC 388
+ +LG G +G V+ + VA+K + + S++ + E ++ ++ H L++L
Sbjct: 187 EKKLGAGQFGEVWMATYNKHTKVAVKTMK-PGSMSVEAFLAEANVMKTLQHDKLVKLHAV 245
Query: 389 CIEEGEPI-LVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIY 447
+E PI ++ EFM G+L L+ + GS P ++
Sbjct: 246 VTKE--PIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN---YI 300
Query: 448 HRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLSDKS 507
HRD++++NIL+ + K+ADFGL+R+G + TAP+ + + KS
Sbjct: 301 HRDLRAANILVSASLVCKIADFGLARVG-AKFPIKWTAPEAI---------NFGSFTIKS 350
Query: 508 DVYSFGVVLIEIIT 521
DV+SFG++L+EI+T
Sbjct: 351 DVWSFGILLMEIVT 364
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 98/212 (46%), Gaps = 17/212 (8%)
Query: 331 RLGTGAYGTVYAGK-LHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGCC 389
LG GA+G VY K A K + + ++ + EI++L++ HP +++LLG
Sbjct: 18 ELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAY 77
Query: 390 IEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHR 449
+G+ ++ EF P G + + E GL +LHS I HR
Sbjct: 78 YHDGKLWIMIEFCPGGAV-DAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKR---IIHR 133
Query: 450 DIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLSD---- 505
D+K+ N+L+ ++ADFG+S + ++ + GTP ++ P+ + D
Sbjct: 134 DLKAGNVLMTLEGDIRLADFGVSAKNL-KTLQKRDSFIGTPYWMAPEVVMCETMKDTPYD 192
Query: 506 -KSDVYSFGVVLIEIITALKVVDFSRPHSEVN 536
K+D++S G+ LIE+ PH E+N
Sbjct: 193 YKADIWSLGITLIEM------AQIEPPHHELN 218
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 124/273 (45%), Gaps = 31/273 (11%)
Query: 332 LGTGAYGTVYAGKLHNDDWVAIKRFRYRDTDSIDQV-MNEIKLLSSVSHPNLLRLLGCCI 390
+G G +G V G + VA+K + D+ Q + E +++ + H NL++LLG +
Sbjct: 29 IGKGEFGDVMLGDYRGNK-VAVKCIK---NDATAQAFLAEASVMTQLRHSNLVQLLGVIV 84
Query: 391 EE-GEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHR 449
EE G +V E+M G+L +L+ S L YL HR
Sbjct: 85 EEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHR 141
Query: 450 DIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLSDKSDV 509
D+ + N+L+ + +KV+DFGL++ E+S + + P+ + S KSDV
Sbjct: 142 DLAARNVLVSEDNVAKVSDFGLTK----EASSTQDTGKLPVKWTAPEALREKKFSTKSDV 197
Query: 510 YSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLEPHRDAWTLSS 569
+SFG++L EI + +V P+ + L + + R+ +G + D
Sbjct: 198 WSFGILLWEIYSFGRV-----PYPRIPLKDV-VPRVEKGYKMDAPD------------GC 239
Query: 570 IHNVAELAFRCLAFHRDMRPTMMEVAEELEHIR 602
V E+ C MRP+ +++ E+LEHI+
Sbjct: 240 PPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIK 272
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 127/292 (43%), Gaps = 43/292 (14%)
Query: 316 YKEIEKATSFFSEKHRLGTGAYGTVYAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLS 375
YKEIE + +G GA+G V K D VAIK+ + E++ LS
Sbjct: 8 YKEIEV-------EEVVGRGAFGVVCKAKWRAKD-VAIKQIESESERK--AFIVELRQLS 57
Query: 376 SVSHPNLLRLLGCCIEEGEPI-LVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXX---XX 431
V+HPN+++L G C+ P+ LV E+ G+L L LP+
Sbjct: 58 RVNHPNIVKLYGACLN---PVCLVMEYAEGGSLYNVLHG--AEPLPYYTAAHAMSWCLQC 112
Query: 432 XXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRS-KVADFGLSRLGMTESSHISTAPQGTP 490
YLHS + HRD+K N+LL K+ DFG + +H+ T +G+
Sbjct: 113 SQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTA---CDIQTHM-TNNKGSA 168
Query: 491 GYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAID-RIGRGC 549
++ P+ + + S+K DV+S+G++L E+IT K P E+ A I + G
Sbjct: 169 AWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRK------PFDEIGGPAFRIMWAVHNGT 222
Query: 550 VDEIIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHI 601
+I +P + L RC + RP+M E+ + + H+
Sbjct: 223 RPPLIKNLPKP------------IESLMTRCWSKDPSQRPSMEEIVKIMTHL 262
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 124/273 (45%), Gaps = 31/273 (11%)
Query: 332 LGTGAYGTVYAGKLHNDDWVAIKRFRYRDTDSIDQV-MNEIKLLSSVSHPNLLRLLGCCI 390
+G G +G V G + VA+K + D+ Q + E +++ + H NL++LLG +
Sbjct: 14 IGKGEFGDVMLGDYRGNK-VAVKCIK---NDATAQAFLAEASVMTQLRHSNLVQLLGVIV 69
Query: 391 EE-GEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHR 449
EE G +V E+M G+L +L+ S L YL HR
Sbjct: 70 EEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHR 126
Query: 450 DIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLSDKSDV 509
D+ + N+L+ + +KV+DFGL++ E+S + + P+ + S KSDV
Sbjct: 127 DLAARNVLVSEDNVAKVSDFGLTK----EASSTQDTGKLPVKWTAPEALREKKFSTKSDV 182
Query: 510 YSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLEPHRDAWTLSS 569
+SFG++L EI + +V P+ + L + + R+ +G + D
Sbjct: 183 WSFGILLWEIYSFGRV-----PYPRIPLKDV-VPRVEKGYKMDAPD------------GC 224
Query: 570 IHNVAELAFRCLAFHRDMRPTMMEVAEELEHIR 602
V E+ C MRP+ +++ E+LEHI+
Sbjct: 225 PPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIK 257
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 98/212 (46%), Gaps = 17/212 (8%)
Query: 331 RLGTGAYGTVYAGK-LHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGCC 389
LG GA+G VY K A K + + ++ + EI++L++ HP +++LLG
Sbjct: 26 ELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAY 85
Query: 390 IEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHR 449
+G+ ++ EF P G + + E GL +LHS I HR
Sbjct: 86 YHDGKLWIMIEFCPGGAV-DAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKR---IIHR 141
Query: 450 DIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLSD---- 505
D+K+ N+L+ ++ADFG+S + ++ + GTP ++ P+ + D
Sbjct: 142 DLKAGNVLMTLEGDIRLADFGVSAKNL-KTLQKRDSFIGTPYWMAPEVVMCETMKDTPYD 200
Query: 506 -KSDVYSFGVVLIEIITALKVVDFSRPHSEVN 536
K+D++S G+ LIE+ PH E+N
Sbjct: 201 YKADIWSLGITLIEM------AQIEPPHHELN 226
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 127/292 (43%), Gaps = 43/292 (14%)
Query: 316 YKEIEKATSFFSEKHRLGTGAYGTVYAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLS 375
YKEIE + +G GA+G V K D VAIK+ + E++ LS
Sbjct: 7 YKEIEV-------EEVVGRGAFGVVCKAKWRAKD-VAIKQIESESERK--AFIVELRQLS 56
Query: 376 SVSHPNLLRLLGCCIEEGEPI-LVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXX---XX 431
V+HPN+++L G C+ P+ LV E+ G+L L LP+
Sbjct: 57 RVNHPNIVKLYGACLN---PVCLVMEYAEGGSLYNVLHG--AEPLPYYTAAHAMSWCLQC 111
Query: 432 XXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRS-KVADFGLSRLGMTESSHISTAPQGTP 490
YLHS + HRD+K N+LL K+ DFG + +H+ T +G+
Sbjct: 112 SQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTA---CDIQTHM-TNNKGSA 167
Query: 491 GYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAID-RIGRGC 549
++ P+ + + S+K DV+S+G++L E+IT K P E+ A I + G
Sbjct: 168 AWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRK------PFDEIGGPAFRIMWAVHNGT 221
Query: 550 VDEIIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHI 601
+I +P + L RC + RP+M E+ + + H+
Sbjct: 222 RPPLIKNLPKP------------IESLMTRCWSKDPSQRPSMEEIVKIMTHL 261
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 127/275 (46%), Gaps = 35/275 (12%)
Query: 332 LGTGAYGTVYAGKLHNDDWVAIKRFRYRDTDSIDQV-MNEIKLLSSVSHPNLLRLLGCCI 390
+G G +G V G + VA+K + D+ Q + E +++ + H NL++LLG +
Sbjct: 201 IGKGEFGDVMLGDYRGNK-VAVKCIK---NDATAQAFLAEASVMTQLRHSNLVQLLGVIV 256
Query: 391 EE-GEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHR 449
EE G +V E+M G+L +L+ S L YL HR
Sbjct: 257 EEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHR 313
Query: 450 DIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLSDKSDV 509
D+ + N+L+ + +KV+DFGL++ E+S + + P+ + S KSDV
Sbjct: 314 DLAARNVLVSEDNVAKVSDFGLTK----EASSTQDTGKLPVKWTAPEALREKKFSTKSDV 369
Query: 510 YSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIID--PYLEPHRDAWTL 567
+SFG++L EI + +V P+ + L + + R+ +G + D P
Sbjct: 370 WSFGILLWEIYSFGRV-----PYPRIPLKDV-VPRVEKGYKMDAPDGCP----------- 412
Query: 568 SSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHIR 602
++++V + C RPT +++ E+LEHIR
Sbjct: 413 PAVYDVMK---NCWHLDAATRPTFLQLREQLEHIR 444
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 92/207 (44%), Gaps = 20/207 (9%)
Query: 332 LGTGAYGTVYAGKLHNDDW---VAIKRFR-YRDTDSIDQVMNEIKLLSSVSH-PNLLRLL 386
+G G +G V ++ D AIKR + Y D E+++L + H PN++ LL
Sbjct: 33 IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLL 92
Query: 387 GCCIEEGEPILVYEFMPNGTLCQHLQRERG-SGLPWXXXXXXXXXXXXXXXYLHSAMN-- 443
G C G L E+ P+G L L++ R P LH A +
Sbjct: 93 GACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVA 152
Query: 444 --------PPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTP-GYLD 494
HRD+ + NIL+ NY +K+ADFGLSR + ++ P ++
Sbjct: 153 RGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSR---GQEVYVKKTMGRLPVRWMA 209
Query: 495 PQYHQYFHLSDKSDVYSFGVVLIEIIT 521
+ Y + SDV+S+GV+L EI++
Sbjct: 210 IESLNYSVYTTNSDVWSYGVLLWEIVS 236
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 92/207 (44%), Gaps = 20/207 (9%)
Query: 332 LGTGAYGTVYAGKLHNDDW---VAIKRFR-YRDTDSIDQVMNEIKLLSSVSH-PNLLRLL 386
+G G +G V ++ D AIKR + Y D E+++L + H PN++ LL
Sbjct: 23 IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLL 82
Query: 387 GCCIEEGEPILVYEFMPNGTLCQHLQRERG-SGLPWXXXXXXXXXXXXXXXYLHSAMN-- 443
G C G L E+ P+G L L++ R P LH A +
Sbjct: 83 GACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVA 142
Query: 444 --------PPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTP-GYLD 494
HRD+ + NIL+ NY +K+ADFGLSR + ++ P ++
Sbjct: 143 RGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSR---GQEVYVKKTMGRLPVRWMA 199
Query: 495 PQYHQYFHLSDKSDVYSFGVVLIEIIT 521
+ Y + SDV+S+GV+L EI++
Sbjct: 200 IESLNYSVYTTNSDVWSYGVLLWEIVS 226
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 94/198 (47%), Gaps = 13/198 (6%)
Query: 330 HRLGTGAYGTVYAGKLHNDD-WVAIKRFRYR-DTDSIDQVMNEIKLLSSVSHPNLLRLLG 387
++G G +G V++G+L D+ VA+K R D + + E ++L SHPN++RL+G
Sbjct: 120 EQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIG 179
Query: 388 CCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIY 447
C ++ +V E + G L+ E G+ L YL S
Sbjct: 180 VCTQKQPIYIVMELVQGGDFLTFLRTE-GARLRVKTLLQMVGDAAAGMEYLESKC---CI 235
Query: 448 HRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQG---TP-GYLDPQYHQYFHL 503
HRD+ + N L+ K++DFG+SR E+ + A G P + P+ Y
Sbjct: 236 HRDLAARNCLVTEKNVLKISDFGMSR---EEADGVXAASGGLRQVPVKWTAPEALNYGRY 292
Query: 504 SDKSDVYSFGVVLIEIIT 521
S +SDV+SFG++L E +
Sbjct: 293 SSESDVWSFGILLWETFS 310
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 101/213 (47%), Gaps = 18/213 (8%)
Query: 326 FSEKH-----RLGTGAYGTVYAGKL-----HNDDWVAIKRFRYRDTDSIDQVMNEIKLLS 375
F E+H +LG G +G+V + + + VA+K+ ++ + + EI++L
Sbjct: 10 FEERHLKFLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 69
Query: 376 SVSHPNLLRLLGCCIEEGEP--ILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXX 433
S+ H N+++ G C G L+ EF+P G+L ++LQ+ + +
Sbjct: 70 SLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHK-ERIDHIKLLQYTSQICK 128
Query: 434 XXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSR-LGMTESSHISTAPQGTPGY 492
YL + HRD+ + NIL++ R K+ DFGL++ L + P +P +
Sbjct: 129 GMEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF 185
Query: 493 -LDPQYHQYFHLSDKSDVYSFGVVLIEIITALK 524
P+ S SDV+SFGVVL E+ T ++
Sbjct: 186 WYAPESLTESKFSVASDVWSFGVVLYELFTYIE 218
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 94/198 (47%), Gaps = 13/198 (6%)
Query: 330 HRLGTGAYGTVYAGKLHNDD-WVAIKRFRYR-DTDSIDQVMNEIKLLSSVSHPNLLRLLG 387
++G G +G V++G+L D+ VA+K R D + + E ++L SHPN++RL+G
Sbjct: 120 EQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIG 179
Query: 388 CCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIY 447
C ++ +V E + G L+ E G+ L YL S
Sbjct: 180 VCTQKQPIYIVMELVQGGDFLTFLRTE-GARLRVKTLLQMVGDAAAGMEYLESKC---CI 235
Query: 448 HRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQG---TP-GYLDPQYHQYFHL 503
HRD+ + N L+ K++DFG+SR E+ + A G P + P+ Y
Sbjct: 236 HRDLAARNCLVTEKNVLKISDFGMSR---EEADGVYAASGGLRQVPVKWTAPEALNYGRY 292
Query: 504 SDKSDVYSFGVVLIEIIT 521
S +SDV+SFG++L E +
Sbjct: 293 SSESDVWSFGILLWETFS 310
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 96/198 (48%), Gaps = 13/198 (6%)
Query: 332 LGTGAYGTVYAGKLH----NDDWVAIKRFRYRDTDSIDQ-VMNEIKLLSSVSHPNLLRLL 386
+G G +G V +G+L D VAIK + T+ + + E ++ HPN++ L
Sbjct: 51 IGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVVHLE 110
Query: 387 GCCIEEGEPIL-VYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPP 445
G + G+P++ V EFM NG L L++ G + +
Sbjct: 111 GV-VTRGKPVMIVIEFMENGALDAFLRKHDGQ----FTVIQLVGMLRGIAAGMRYLADMG 165
Query: 446 IYHRDIKSSNILLDYNYRSKVADFGLSRL--GMTESSHISTAPQGTPGYLDPQYHQYFHL 503
HRD+ + NIL++ N KV+DFGLSR+ E+ + +T + + P+ QY
Sbjct: 166 YVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAIQYRKF 225
Query: 504 SDKSDVYSFGVVLIEIIT 521
+ SDV+S+G+V+ E+++
Sbjct: 226 TSASDVWSYGIVMWEVMS 243
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 107/245 (43%), Gaps = 29/245 (11%)
Query: 307 GNSSVPFYPYKEIEKAT------SFFSEKHRLGTGAYGTVYAGKLHNDDWVAIKRFRYRD 360
G ++ F K+ E T F+ LG GA+G VY K N + + + D
Sbjct: 14 GTENLYFQSMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVY--KAQNKETSVLAAAKVID 71
Query: 361 TDS---IDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTL-CQHLQRERG 416
T S ++ M EI +L+S HPN+++LL E ++ EF G + L+ ER
Sbjct: 72 TKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERP 131
Query: 417 SGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGM 476
L YLH + I HRD+K+ NIL + K+ADFG+S
Sbjct: 132 --LTESQIQVVCKQTLDALNYLH---DNKIIHRDLKAGNILFTLDGDIKLADFGVSAKN- 185
Query: 477 TESSHISTAPQGTPGYLDPQYHQYFHLSD-----KSDVYSFGVVLIEIITALKVVDFSRP 531
T + + GTP ++ P+ D K+DV+S G+ LIE+ + P
Sbjct: 186 TRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM------AEIEPP 239
Query: 532 HSEVN 536
H E+N
Sbjct: 240 HHELN 244
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 96/197 (48%), Gaps = 11/197 (5%)
Query: 332 LGTGAYGTVYAGKLH----NDDWVAIKRFRYRDTDSIDQ-VMNEIKLLSSVSHPNLLRLL 386
+G G +G V +G+L + VAIK + T+ + + E ++ HPN++RL
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112
Query: 387 GCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPI 446
G + ++V E+M NG+L L R+ + YL S M
Sbjct: 113 GVVTKSKPVMIVTEYMENGSLDSFL-RKHDAQFTVIQLVGMLRGIASGMKYL-SDMG--F 168
Query: 447 YHRDIKSSNILLDYNYRSKVADFGLSRL--GMTESSHISTAPQGTPGYLDPQYHQYFHLS 504
HRD+ + NIL++ N KV+DFGLSR+ E+++ + + + P+ Y +
Sbjct: 169 VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFT 228
Query: 505 DKSDVYSFGVVLIEIIT 521
SDV+S+G+VL E+++
Sbjct: 229 SASDVWSYGIVLWEVMS 245
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 96/197 (48%), Gaps = 11/197 (5%)
Query: 332 LGTGAYGTVYAGKLH----NDDWVAIKRFRYRDTDSIDQ-VMNEIKLLSSVSHPNLLRLL 386
+G G +G V +G+L + VAIK + T+ + + E ++ HPN++RL
Sbjct: 24 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 83
Query: 387 GCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPI 446
G + ++V E+M NG+L L R+ + YL S M
Sbjct: 84 GVVTKSKPVMIVTEYMENGSLDSFL-RKHDAQFTVIQLVGMLRGIASGMKYL-SDMG--Y 139
Query: 447 YHRDIKSSNILLDYNYRSKVADFGLSRL--GMTESSHISTAPQGTPGYLDPQYHQYFHLS 504
HRD+ + NIL++ N KV+DFGLSR+ E+++ + + + P+ Y +
Sbjct: 140 VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFT 199
Query: 505 DKSDVYSFGVVLIEIIT 521
SDV+S+G+VL E+++
Sbjct: 200 SASDVWSYGIVLWEVMS 216
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 126/281 (44%), Gaps = 35/281 (12%)
Query: 332 LGTGAYGTVYAGKLH----NDDWVAIKRFR--YRDTDSIDQVMNEIKLLSSVSHPNLLRL 385
+G G +G V +G L + +VAIK + Y + D ++E ++ HPN++ L
Sbjct: 41 IGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRD-FLSEASIMGQFDHPNVIHL 99
Query: 386 LGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPP 445
G + +++ EFM NG+L L++ G YL + MN
Sbjct: 100 EGVVTKSTPVMIITEFMENGSLDSFLRQNDGQ-FTVIQLVGMLRGIAAGMKYL-ADMN-- 155
Query: 446 IYHRDIKSSNILLDYNYRSKVADFGLSRL---GMTESSHISTAPQGTP-GYLDPQYHQYF 501
HRD+ + NIL++ N KV+DFGLSR ++ ++ S P + P+ QY
Sbjct: 156 YVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYR 215
Query: 502 HLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPY-LEP 560
+ SDV+S+G+V+ E+++ + RP+ D + ++ I Y L P
Sbjct: 216 KFTSASDVWSYGIVMWEVMSYGE-----RPY---------WDMTNQDVINAIEQDYRLPP 261
Query: 561 HRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHI 601
D S++H +L C R+ RP ++ L+ +
Sbjct: 262 PMDC--PSALH---QLMLDCWQKDRNHRPKFGQIVNTLDKM 297
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 96/197 (48%), Gaps = 11/197 (5%)
Query: 332 LGTGAYGTVYAGKLH----NDDWVAIKRFRYRDTDSIDQ-VMNEIKLLSSVSHPNLLRLL 386
+G G +G V +G+L + VAIK + T+ + + E ++ HPN++RL
Sbjct: 41 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 100
Query: 387 GCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPI 446
G + ++V E+M NG+L L R+ + YL S M
Sbjct: 101 GVVTKSKPVMIVTEYMENGSLDSFL-RKHDAQFTVIQLVGMLRGIASGMKYL-SDMG--Y 156
Query: 447 YHRDIKSSNILLDYNYRSKVADFGLSRL--GMTESSHISTAPQGTPGYLDPQYHQYFHLS 504
HRD+ + NIL++ N KV+DFGLSR+ E+++ + + + P+ Y +
Sbjct: 157 VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFT 216
Query: 505 DKSDVYSFGVVLIEIIT 521
SDV+S+G+VL E+++
Sbjct: 217 SASDVWSYGIVLWEVMS 233
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 92/207 (44%), Gaps = 20/207 (9%)
Query: 332 LGTGAYGTVYAGKLHNDDW---VAIKRFR-YRDTDSIDQVMNEIKLLSSVSH-PNLLRLL 386
+G G +G V ++ D AIKR + Y D E+++L + H PN++ LL
Sbjct: 30 IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLL 89
Query: 387 GCCIEEGEPILVYEFMPNGTLCQHLQRERG-SGLPWXXXXXXXXXXXXXXXYLHSAMN-- 443
G C G L E+ P+G L L++ R P LH A +
Sbjct: 90 GACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVA 149
Query: 444 --------PPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTP-GYLD 494
HR++ + NIL+ NY +K+ADFGLSR + ++ P ++
Sbjct: 150 RGMDYLSQKQFIHRNLAARNILVGENYVAKIADFGLSR---GQEVYVKKTMGRLPVRWMA 206
Query: 495 PQYHQYFHLSDKSDVYSFGVVLIEIIT 521
+ Y + SDV+S+GV+L EI++
Sbjct: 207 IESLNYSVYTTNSDVWSYGVLLWEIVS 233
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 107/249 (42%), Gaps = 37/249 (14%)
Query: 307 GNSSVPFYPYKEIEKAT------SFFSEKHRLGTGAYGTVYAGKLHNDDWVAIKRFRYRD 360
G ++ F K+ E T F+ LG GA+G VY K N + + + D
Sbjct: 14 GTENLYFQSMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVY--KAQNKETSVLAAAKVID 71
Query: 361 TDS---IDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTL-CQHLQRERG 416
T S ++ M EI +L+S HPN+++LL E ++ EF G + L+ ER
Sbjct: 72 TKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERP 131
Query: 417 SGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLS---- 472
L YLH + I HRD+K+ NIL + K+ADFG+S
Sbjct: 132 --LTESQIQVVCKQTLDALNYLH---DNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNT 186
Query: 473 RLGMTESSHISTAPQGTPGYLDPQYHQYFHLSD-----KSDVYSFGVVLIEIITALKVVD 527
R S I GTP ++ P+ D K+DV+S G+ LIE+ +
Sbjct: 187 RXIQRRDSFI-----GTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM------AE 235
Query: 528 FSRPHSEVN 536
PH E+N
Sbjct: 236 IEPPHHELN 244
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 96/197 (48%), Gaps = 11/197 (5%)
Query: 332 LGTGAYGTVYAGKLH----NDDWVAIKRFRYRDTDSIDQ-VMNEIKLLSSVSHPNLLRLL 386
+G G +G V +G+L + VAIK + T+ + + E ++ HPN++RL
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112
Query: 387 GCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPI 446
G + ++V E+M NG+L L R+ + YL S M
Sbjct: 113 GVVTKSKPVMIVTEYMENGSLDSFL-RKHDAQFTVIQLVGMLRGIASGMKYL-SDMG--Y 168
Query: 447 YHRDIKSSNILLDYNYRSKVADFGLSRL--GMTESSHISTAPQGTPGYLDPQYHQYFHLS 504
HRD+ + NIL++ N KV+DFGLSR+ E+++ + + + P+ Y +
Sbjct: 169 VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFT 228
Query: 505 DKSDVYSFGVVLIEIIT 521
SDV+S+G+VL E+++
Sbjct: 229 SASDVWSYGIVLWEVMS 245
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 96/197 (48%), Gaps = 11/197 (5%)
Query: 332 LGTGAYGTVYAGKLH----NDDWVAIKRFRYRDTDSIDQ-VMNEIKLLSSVSHPNLLRLL 386
+G G +G V +G+L + VAIK + T+ + + E ++ HPN++RL
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112
Query: 387 GCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPI 446
G + ++V E+M NG+L L R+ + YL S M
Sbjct: 113 GVVTKSKPVMIVTEYMENGSLDSFL-RKHDAQFTVIQLVGMLRGIASGMKYL-SDMG--Y 168
Query: 447 YHRDIKSSNILLDYNYRSKVADFGLSRL--GMTESSHISTAPQGTPGYLDPQYHQYFHLS 504
HRD+ + NIL++ N KV+DFGLSR+ E+++ + + + P+ Y +
Sbjct: 169 VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFT 228
Query: 505 DKSDVYSFGVVLIEIIT 521
SDV+S+G+VL E+++
Sbjct: 229 SASDVWSYGIVLWEVMS 245
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 96/197 (48%), Gaps = 11/197 (5%)
Query: 332 LGTGAYGTVYAGKLH----NDDWVAIKRFRYRDTDSIDQ-VMNEIKLLSSVSHPNLLRLL 386
+G G +G V +G+L + VAIK + T+ + + E ++ HPN++RL
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112
Query: 387 GCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPI 446
G + ++V E+M NG+L L R+ + YL S M
Sbjct: 113 GVVTKSKPVMIVTEYMENGSLDSFL-RKHDAQFTVIQLVGMLRGIASGMKYL-SDMG--Y 168
Query: 447 YHRDIKSSNILLDYNYRSKVADFGLSRL--GMTESSHISTAPQGTPGYLDPQYHQYFHLS 504
HRD+ + NIL++ N KV+DFGLSR+ E+++ + + + P+ Y +
Sbjct: 169 VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFT 228
Query: 505 DKSDVYSFGVVLIEIIT 521
SDV+S+G+VL E+++
Sbjct: 229 SASDVWSYGIVLWEVMS 245
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 96/197 (48%), Gaps = 11/197 (5%)
Query: 332 LGTGAYGTVYAGKLH----NDDWVAIKRFRYRDTDSIDQ-VMNEIKLLSSVSHPNLLRLL 386
+G G +G V +G+L + VAIK + T+ + + E ++ HPN++RL
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112
Query: 387 GCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPI 446
G + ++V E+M NG+L L R+ + YL S M
Sbjct: 113 GVVTKSKPVMIVTEYMENGSLDSFL-RKHDAQFTVIQLVGMLRGIASGMKYL-SDMG--Y 168
Query: 447 YHRDIKSSNILLDYNYRSKVADFGLSRL--GMTESSHISTAPQGTPGYLDPQYHQYFHLS 504
HRD+ + NIL++ N KV+DFGLSR+ E+++ + + + P+ Y +
Sbjct: 169 VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFT 228
Query: 505 DKSDVYSFGVVLIEIIT 521
SDV+S+G+VL E+++
Sbjct: 229 SASDVWSYGIVLWEVMS 245
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 100/213 (46%), Gaps = 18/213 (8%)
Query: 326 FSEKH-----RLGTGAYGTVYAGKL-----HNDDWVAIKRFRYRDTDSIDQVMNEIKLLS 375
F E+H +LG G +G+V + + + VA+K+ ++ + + EI++L
Sbjct: 14 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 73
Query: 376 SVSHPNLLRLLGCCIEEGEP--ILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXX 433
S+ H N+++ G C G L+ E++P G+L +LQ+ + +
Sbjct: 74 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQICK 132
Query: 434 XXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSR-LGMTESSHISTAPQGTPGY 492
YL + HRD+ + NIL++ R K+ DFGL++ L + P +P +
Sbjct: 133 GMEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF 189
Query: 493 -LDPQYHQYFHLSDKSDVYSFGVVLIEIITALK 524
P+ S SDV+SFGVVL E+ T ++
Sbjct: 190 WYAPESLTESKFSVASDVWSFGVVLYELFTYIE 222
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 96/197 (48%), Gaps = 11/197 (5%)
Query: 332 LGTGAYGTVYAGKLH----NDDWVAIKRFRYRDTDSIDQ-VMNEIKLLSSVSHPNLLRLL 386
+G G +G V +G+L + VAIK + T+ + + E ++ HPN++RL
Sbjct: 51 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 110
Query: 387 GCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPI 446
G + ++V E+M NG+L L R+ + YL S M
Sbjct: 111 GVVTKSKPVMIVTEYMENGSLDSFL-RKHDAQFTVIQLVGMLRGIASGMKYL-SDMG--Y 166
Query: 447 YHRDIKSSNILLDYNYRSKVADFGLSRL--GMTESSHISTAPQGTPGYLDPQYHQYFHLS 504
HRD+ + NIL++ N KV+DFGLSR+ E+++ + + + P+ Y +
Sbjct: 167 VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFT 226
Query: 505 DKSDVYSFGVVLIEIIT 521
SDV+S+G+VL E+++
Sbjct: 227 SASDVWSYGIVLWEVMS 243
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 105/245 (42%), Gaps = 29/245 (11%)
Query: 307 GNSSVPFYPYKEIEKAT------SFFSEKHRLGTGAYGTVYAGKLHNDDWVAIKRFRYRD 360
G ++ F K+ E T F+ LG GA+G VY K N + + + D
Sbjct: 14 GTENLYFQSMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVY--KAQNKETSVLAAAKVID 71
Query: 361 TDS---IDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTL-CQHLQRERG 416
T S ++ M EI +L+S HPN+++LL E ++ EF G + L+ ER
Sbjct: 72 TKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERP 131
Query: 417 SGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGM 476
L YLH + I HRD+K+ NIL + K+ADFG+S
Sbjct: 132 --LTESQIQVVCKQTLDALNYLH---DNKIIHRDLKAGNILFTLDGDIKLADFGVSAKN- 185
Query: 477 TESSHISTAPQGTPGYLDPQYHQYFHLSD-----KSDVYSFGVVLIEIITALKVVDFSRP 531
T GTP ++ P+ D K+DV+S G+ LIE+ + P
Sbjct: 186 TRXIQRRDXFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM------AEIEPP 239
Query: 532 HSEVN 536
H E+N
Sbjct: 240 HHELN 244
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 100/213 (46%), Gaps = 18/213 (8%)
Query: 326 FSEKH-----RLGTGAYGTVYAGKL-----HNDDWVAIKRFRYRDTDSIDQVMNEIKLLS 375
F E+H +LG G +G+V + + + VA+K+ ++ + + EI++L
Sbjct: 12 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 71
Query: 376 SVSHPNLLRLLGCCIEEGEP--ILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXX 433
S+ H N+++ G C G L+ E++P G+L +LQ+ + +
Sbjct: 72 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQICK 130
Query: 434 XXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSR-LGMTESSHISTAPQGTPGY 492
YL + HRD+ + NIL++ R K+ DFGL++ L + P +P +
Sbjct: 131 GMEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF 187
Query: 493 -LDPQYHQYFHLSDKSDVYSFGVVLIEIITALK 524
P+ S SDV+SFGVVL E+ T ++
Sbjct: 188 WYAPESLTESKFSVASDVWSFGVVLYELFTYIE 220
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 98/213 (46%), Gaps = 18/213 (8%)
Query: 326 FSEKH-----RLGTGAYGTVYAGKL-----HNDDWVAIKRFRYRDTDSIDQVMNEIKLLS 375
F E+H +LG G +G+V + + + VA+K+ ++ + + EI++L
Sbjct: 7 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 66
Query: 376 SVSHPNLLRLLGCCIEEGEP--ILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXX 433
S+ H N+++ G C G L+ E++P G+L +LQ+ + +
Sbjct: 67 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQICK 125
Query: 434 XXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPG-- 491
YL + HRD+ + NIL++ R K+ DFGL+++ + G
Sbjct: 126 GMEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIF 182
Query: 492 YLDPQYHQYFHLSDKSDVYSFGVVLIEIITALK 524
+ P+ S SDV+SFGVVL E+ T ++
Sbjct: 183 WYAPESLTESKFSVASDVWSFGVVLYELFTYIE 215
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 129/291 (44%), Gaps = 21/291 (7%)
Query: 326 FSEKH-----RLGTGAYGTVYAGKL-----HNDDWVAIKRFRYRDTDSIDQVMNEIKLLS 375
F E+H +LG G +G+V + + + VA+K+ ++ + + EI++L
Sbjct: 25 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 84
Query: 376 SVSHPNLLRLLGCCIEEGEP--ILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXX 433
S+ H N+++ G C G L+ E++P G+L +LQ+ + +
Sbjct: 85 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQICK 143
Query: 434 XXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSR-LGMTESSHISTAPQGTPGY 492
YL + HRD+ + NIL++ R K+ DFGL++ L + P +P +
Sbjct: 144 GMEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF 200
Query: 493 -LDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVD 551
P+ S SDV+SFGVVL E+ T ++ P +E + + D+ G+ V
Sbjct: 201 WYAPESLTESKFSVASDVWSFGVVLYELFTYIE--KSKSPPAEF-MRMIGNDKQGQMIVF 257
Query: 552 EIIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHIR 602
+I+ R + + C + + RP+ ++A ++ IR
Sbjct: 258 HLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIR 308
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 118/274 (43%), Gaps = 33/274 (12%)
Query: 329 KHRLGTGAYGTVYAGKLHN------DDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNL 382
K LG GA+G V+ + +N VA+K + ++ E +LL+++ H ++
Sbjct: 18 KRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHI 77
Query: 383 LRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERG------------SGLPWXXXXXXXXX 430
++ G C+E I+V+E+M +G L + L R G + L
Sbjct: 78 VKFYGVCVEGDPLIMVFEYMKHGDLNKFL-RAHGPDAVLMAEGNPPTELTQSQMLHIAQQ 136
Query: 431 XXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSR-LGMTESSHISTAPQGT 489
YL S HRD+ + N L+ N K+ DFG+SR + T+ +
Sbjct: 137 IAAGMVYLASQH---FVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLP 193
Query: 490 PGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRI---G 546
++ P+ Y + +SDV+S GVVL EI T K + ++EV + + R+
Sbjct: 194 IRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEV-IECITQGRVLQRP 252
Query: 547 RGCVDEIIDPYL-----EPHRDAWTLSSIHNVAE 575
R C E+ + L EPH + IH + +
Sbjct: 253 RTCPQEVYELMLGCWQREPHMRK-NIKGIHTLLQ 285
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 100/213 (46%), Gaps = 18/213 (8%)
Query: 326 FSEKH-----RLGTGAYGTVYAGKL-----HNDDWVAIKRFRYRDTDSIDQVMNEIKLLS 375
F E+H +LG G +G+V + + + VA+K+ ++ + + EI++L
Sbjct: 13 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 72
Query: 376 SVSHPNLLRLLGCCIEEGEP--ILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXX 433
S+ H N+++ G C G L+ E++P G+L +LQ+ + +
Sbjct: 73 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQICK 131
Query: 434 XXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSR-LGMTESSHISTAPQGTPGY 492
YL + HRD+ + NIL++ R K+ DFGL++ L + P +P +
Sbjct: 132 GMEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF 188
Query: 493 -LDPQYHQYFHLSDKSDVYSFGVVLIEIITALK 524
P+ S SDV+SFGVVL E+ T ++
Sbjct: 189 WYAPESLTESKFSVASDVWSFGVVLYELFTYIE 221
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 100/213 (46%), Gaps = 18/213 (8%)
Query: 326 FSEKH-----RLGTGAYGTVYAGKL-----HNDDWVAIKRFRYRDTDSIDQVMNEIKLLS 375
F E+H +LG G +G+V + + + VA+K+ ++ + + EI++L
Sbjct: 7 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 66
Query: 376 SVSHPNLLRLLGCCIEEGEP--ILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXX 433
S+ H N+++ G C G L+ E++P G+L +LQ+ + +
Sbjct: 67 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQICK 125
Query: 434 XXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSR-LGMTESSHISTAPQGTPGY 492
YL + HRD+ + NIL++ R K+ DFGL++ L + P +P +
Sbjct: 126 GMEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF 182
Query: 493 -LDPQYHQYFHLSDKSDVYSFGVVLIEIITALK 524
P+ S SDV+SFGVVL E+ T ++
Sbjct: 183 WYAPESLTESKFSVASDVWSFGVVLYELFTYIE 215
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 100/213 (46%), Gaps = 18/213 (8%)
Query: 326 FSEKH-----RLGTGAYGTVYAGKL-----HNDDWVAIKRFRYRDTDSIDQVMNEIKLLS 375
F E+H +LG G +G+V + + + VA+K+ ++ + + EI++L
Sbjct: 10 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 69
Query: 376 SVSHPNLLRLLGCCIEEGEP--ILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXX 433
S+ H N+++ G C G L+ E++P G+L +LQ+ + +
Sbjct: 70 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQICK 128
Query: 434 XXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSR-LGMTESSHISTAPQGTPGY 492
YL + HRD+ + NIL++ R K+ DFGL++ L + P +P +
Sbjct: 129 GMEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF 185
Query: 493 -LDPQYHQYFHLSDKSDVYSFGVVLIEIITALK 524
P+ S SDV+SFGVVL E+ T ++
Sbjct: 186 WYAPESLTESKFSVASDVWSFGVVLYELFTYIE 218
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 85/196 (43%), Gaps = 11/196 (5%)
Query: 332 LGTGAYGTVYAGKLHNDDWV----AIKRFRYRDTDSIDQVMNEIKLLSSVS-HPNLLRLL 386
+G G+Y V +L D + +K+ D + ID V E + S HP L+ L
Sbjct: 60 IGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLH 119
Query: 387 GCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPI 446
C E V E++ G L H+QR+R LP YLH I
Sbjct: 120 SCFQTESRLFFVIEYVNGGDLMFHMQRQRK--LPEEHARFYSAEISLALNYLHER---GI 174
Query: 447 YHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLSDK 506
+RD+K N+LLD K+ D+G+ + G+ ST GTP Y+ P+ +
Sbjct: 175 IYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFC-GTPNYIAPEILRGEDYGFS 233
Query: 507 SDVYSFGVVLIEIITA 522
D ++ GV++ E++
Sbjct: 234 VDWWALGVLMFEMMAG 249
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 100/213 (46%), Gaps = 18/213 (8%)
Query: 326 FSEKH-----RLGTGAYGTVYAGKL-----HNDDWVAIKRFRYRDTDSIDQVMNEIKLLS 375
F E+H +LG G +G+V + + + VA+K+ ++ + + EI++L
Sbjct: 38 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 97
Query: 376 SVSHPNLLRLLGCCIEEGEP--ILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXX 433
S+ H N+++ G C G L+ E++P G+L +LQ+ + +
Sbjct: 98 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQICK 156
Query: 434 XXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSR-LGMTESSHISTAPQGTPGY 492
YL + HRD+ + NIL++ R K+ DFGL++ L + P +P +
Sbjct: 157 GMEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF 213
Query: 493 -LDPQYHQYFHLSDKSDVYSFGVVLIEIITALK 524
P+ S SDV+SFGVVL E+ T ++
Sbjct: 214 WYAPESLTESKFSVASDVWSFGVVLYELFTYIE 246
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 100/213 (46%), Gaps = 18/213 (8%)
Query: 326 FSEKH-----RLGTGAYGTVYAGKL-----HNDDWVAIKRFRYRDTDSIDQVMNEIKLLS 375
F E+H +LG G +G+V + + + VA+K+ ++ + + EI++L
Sbjct: 11 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 70
Query: 376 SVSHPNLLRLLGCCIEEGEP--ILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXX 433
S+ H N+++ G C G L+ E++P G+L +LQ+ + +
Sbjct: 71 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQICK 129
Query: 434 XXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSR-LGMTESSHISTAPQGTPGY 492
YL + HRD+ + NIL++ R K+ DFGL++ L + P +P +
Sbjct: 130 GMEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF 186
Query: 493 -LDPQYHQYFHLSDKSDVYSFGVVLIEIITALK 524
P+ S SDV+SFGVVL E+ T ++
Sbjct: 187 WYAPESLTESKFSVASDVWSFGVVLYELFTYIE 219
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 96/197 (48%), Gaps = 11/197 (5%)
Query: 332 LGTGAYGTVYAGKLH----NDDWVAIKRFRYRDTDSIDQ-VMNEIKLLSSVSHPNLLRLL 386
+G G +G V +G+L + VAIK + T+ + + E ++ HPN++RL
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112
Query: 387 GCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPI 446
G + ++V E+M NG+L L R+ + YL S M
Sbjct: 113 GVVTKSKPVMIVTEYMENGSLDSFL-RKHDAQFTVIQLVGMLRGIASGMKYL-SDMG--Y 168
Query: 447 YHRDIKSSNILLDYNYRSKVADFGLSRL--GMTESSHISTAPQGTPGYLDPQYHQYFHLS 504
HRD+ + NIL++ N KV+DFGL+R+ E+++ + + + P+ Y +
Sbjct: 169 VHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFT 228
Query: 505 DKSDVYSFGVVLIEIIT 521
SDV+S+G+VL E+++
Sbjct: 229 SASDVWSYGIVLWEVMS 245
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 100/213 (46%), Gaps = 18/213 (8%)
Query: 326 FSEKH-----RLGTGAYGTVYAGKL-----HNDDWVAIKRFRYRDTDSIDQVMNEIKLLS 375
F E+H +LG G +G+V + + + VA+K+ ++ + + EI++L
Sbjct: 7 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 66
Query: 376 SVSHPNLLRLLGCCIEEGEP--ILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXX 433
S+ H N+++ G C G L+ E++P G+L +LQ+ + +
Sbjct: 67 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQICK 125
Query: 434 XXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSR-LGMTESSHISTAPQGTPGY 492
YL + HRD+ + NIL++ R K+ DFGL++ L + P +P +
Sbjct: 126 GMEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF 182
Query: 493 -LDPQYHQYFHLSDKSDVYSFGVVLIEIITALK 524
P+ S SDV+SFGVVL E+ T ++
Sbjct: 183 WYAPESLTESKFSVASDVWSFGVVLYELFTYIE 215
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 100/213 (46%), Gaps = 18/213 (8%)
Query: 326 FSEKH-----RLGTGAYGTVYAGKL-----HNDDWVAIKRFRYRDTDSIDQVMNEIKLLS 375
F E+H +LG G +G+V + + + VA+K+ ++ + + EI++L
Sbjct: 25 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 84
Query: 376 SVSHPNLLRLLGCCIEEGEP--ILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXX 433
S+ H N+++ G C G L+ E++P G+L +LQ+ + +
Sbjct: 85 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQICK 143
Query: 434 XXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSR-LGMTESSHISTAPQGTPGY 492
YL + HRD+ + NIL++ R K+ DFGL++ L + P +P +
Sbjct: 144 GMEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF 200
Query: 493 -LDPQYHQYFHLSDKSDVYSFGVVLIEIITALK 524
P+ S SDV+SFGVVL E+ T ++
Sbjct: 201 WYAPESLTESKFSVASDVWSFGVVLYELFTYIE 233
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 100/213 (46%), Gaps = 18/213 (8%)
Query: 326 FSEKH-----RLGTGAYGTVYAGKL-----HNDDWVAIKRFRYRDTDSIDQVMNEIKLLS 375
F E+H +LG G +G+V + + + VA+K+ ++ + + EI++L
Sbjct: 5 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 64
Query: 376 SVSHPNLLRLLGCCIEEGEP--ILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXX 433
S+ H N+++ G C G L+ E++P G+L +LQ+ + +
Sbjct: 65 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQICK 123
Query: 434 XXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSR-LGMTESSHISTAPQGTPGY 492
YL + HRD+ + NIL++ R K+ DFGL++ L + P +P +
Sbjct: 124 GMEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF 180
Query: 493 -LDPQYHQYFHLSDKSDVYSFGVVLIEIITALK 524
P+ S SDV+SFGVVL E+ T ++
Sbjct: 181 WYAPESLTESKFSVASDVWSFGVVLYELFTYIE 213
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 100/213 (46%), Gaps = 18/213 (8%)
Query: 326 FSEKH-----RLGTGAYGTVYAGKL-----HNDDWVAIKRFRYRDTDSIDQVMNEIKLLS 375
F E+H +LG G +G+V + + + VA+K+ ++ + + EI++L
Sbjct: 6 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 65
Query: 376 SVSHPNLLRLLGCCIEEGEP--ILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXX 433
S+ H N+++ G C G L+ E++P G+L +LQ+ + +
Sbjct: 66 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQICK 124
Query: 434 XXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSR-LGMTESSHISTAPQGTPGY 492
YL + HRD+ + NIL++ R K+ DFGL++ L + P +P +
Sbjct: 125 GMEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF 181
Query: 493 -LDPQYHQYFHLSDKSDVYSFGVVLIEIITALK 524
P+ S SDV+SFGVVL E+ T ++
Sbjct: 182 WYAPESLTESKFSVASDVWSFGVVLYELFTYIE 214
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 95/197 (48%), Gaps = 11/197 (5%)
Query: 332 LGTGAYGTVYAGKLH----NDDWVAIKRFRYRDTDSIDQ-VMNEIKLLSSVSHPNLLRLL 386
+G G +G V +G+L + VAIK + T+ + + E ++ HPN++RL
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112
Query: 387 GCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPI 446
G + ++V E M NG+L L R+ + YL S M
Sbjct: 113 GVVTKSKPVMIVTEXMENGSLDSFL-RKHDAQFTVIQLVGMLRGIASGMKYL-SDMGA-- 168
Query: 447 YHRDIKSSNILLDYNYRSKVADFGLSRL--GMTESSHISTAPQGTPGYLDPQYHQYFHLS 504
HRD+ + NIL++ N KV+DFGLSR+ E+++ + + + P+ Y +
Sbjct: 169 VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFT 228
Query: 505 DKSDVYSFGVVLIEIIT 521
SDV+S+G+VL E+++
Sbjct: 229 SASDVWSYGIVLWEVMS 245
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 95/197 (48%), Gaps = 11/197 (5%)
Query: 332 LGTGAYGTVYAGKLH----NDDWVAIKRFRYRDTDSIDQ-VMNEIKLLSSVSHPNLLRLL 386
+G G +G V +G+L + VAIK + T+ + + E ++ HPN++RL
Sbjct: 24 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 83
Query: 387 GCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPI 446
G + ++V E M NG+L L R+ + YL S M
Sbjct: 84 GVVTKSKPVMIVTEXMENGSLDSFL-RKHDAQFTVIQLVGMLRGIASGMKYL-SDMG--Y 139
Query: 447 YHRDIKSSNILLDYNYRSKVADFGLSRL--GMTESSHISTAPQGTPGYLDPQYHQYFHLS 504
HRD+ + NIL++ N KV+DFGLSR+ E+++ + + + P+ Y +
Sbjct: 140 VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFT 199
Query: 505 DKSDVYSFGVVLIEIIT 521
SDV+S+G+VL E+++
Sbjct: 200 SASDVWSYGIVLWEVMS 216
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 120/303 (39%), Gaps = 42/303 (13%)
Query: 332 LGTGAYGTVYAGKLHNDDWVAIKRFRYR---DTDSID-QVMNEIKLLSSVSHPNLLRLLG 387
LG G +G VY + ++ + ++ + ++ Q+ E+++ S + HPN+LRL G
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 101
Query: 388 CCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIY 447
+ L+ E+ P GT+ + LQ + S Y HS +
Sbjct: 102 YFHDATRVYLILEYAPLGTVYRELQ--KLSKFDEQRTATYITELANALSYCHSKR---VI 156
Query: 448 HRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLSDKS 507
HRDIK N+LL K+ADFG S + S T GT YL P+ + +K
Sbjct: 157 HRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKV 213
Query: 508 DVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLEPHRDAWTL 567
D++S GV+ E + +P E N RI R D E RD
Sbjct: 214 DLWSLGVLCYEFLVG-------KPPFEANTYQETYKRISRVEFT-FPDFVTEGARD---- 261
Query: 568 SSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHIRVSSWASNIYMGSPAVSCCSLSECGS 627
L R L + RP + EV LEH W I S S C E S
Sbjct: 262 --------LISRLLKHNPSQRPMLREV---LEH----PW---ITANSSKPSNCQNKESAS 303
Query: 628 ERS 630
++S
Sbjct: 304 KQS 306
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 95/197 (48%), Gaps = 11/197 (5%)
Query: 332 LGTGAYGTVYAGKLH----NDDWVAIKRFRYRDTDSIDQ-VMNEIKLLSSVSHPNLLRLL 386
+G G +G V +G+L + VAIK + T+ + + E ++ HPN++RL
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112
Query: 387 GCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPI 446
G + ++V E+M NG+L L R+ + YL S M
Sbjct: 113 GVVTKSKPVMIVTEYMENGSLDSFL-RKHDAQFTVIQLVGMLRGIASGMKYL-SDMG--Y 168
Query: 447 YHRDIKSSNILLDYNYRSKVADFGLSRL--GMTESSHISTAPQGTPGYLDPQYHQYFHLS 504
HRD+ + NIL++ N KV+DFGL R+ E+++ + + + P+ Y +
Sbjct: 169 VHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFT 228
Query: 505 DKSDVYSFGVVLIEIIT 521
SDV+S+G+VL E+++
Sbjct: 229 SASDVWSYGIVLWEVMS 245
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 120/303 (39%), Gaps = 42/303 (13%)
Query: 332 LGTGAYGTVYAGKLHNDDWVAIKRFRYR---DTDSID-QVMNEIKLLSSVSHPNLLRLLG 387
LG G +G VY + ++ + ++ + ++ Q+ E+++ S + HPN+LRL G
Sbjct: 33 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 92
Query: 388 CCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIY 447
+ L+ E+ P GT+ + LQ + S Y HS +
Sbjct: 93 YFHDATRVYLILEYAPLGTVYRELQ--KLSKFDEQRTATYITELANALSYCHSKR---VI 147
Query: 448 HRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLSDKS 507
HRDIK N+LL K+ADFG S + S T GT YL P+ + +K
Sbjct: 148 HRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKV 204
Query: 508 DVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLEPHRDAWTL 567
D++S GV+ E + +P E N RI R D E RD
Sbjct: 205 DLWSLGVLCYEFLVG-------KPPFEANTYQETYKRISRVEFT-FPDFVTEGARD---- 252
Query: 568 SSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHIRVSSWASNIYMGSPAVSCCSLSECGS 627
L R L + RP + EV LEH W I S S C E S
Sbjct: 253 --------LISRLLKHNPSQRPMLREV---LEH----PW---ITANSSKPSNCQNKESAS 294
Query: 628 ERS 630
++S
Sbjct: 295 KQS 297
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 95/220 (43%), Gaps = 19/220 (8%)
Query: 332 LGTGAYGTVYAGKLHNDDWVAIKRFRYR---DTDSID-QVMNEIKLLSSVSHPNLLRLLG 387
LG G +G VY + N ++ + ++ + ++ Q+ E+++ S + HPN+LRL G
Sbjct: 16 LGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 388 CCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIY 447
+ L+ E+ P GT+ + LQ + S Y HS +
Sbjct: 76 YFHDSTRVYLILEYAPLGTVYRELQ--KLSKFDEQRTATYITELANALSYCHSKK---VI 130
Query: 448 HRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLSDKS 507
HRDIK N+LL K+ADFG S + S A GT YL P+ + +K
Sbjct: 131 HRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRAALCGTLDYLPPEMIEGRMHDEKV 187
Query: 508 DVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGR 547
D++S GV+ E + +P E N RI R
Sbjct: 188 DLWSLGVLCYEFLVG-------KPPFEANTYQDTYKRISR 220
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 89/196 (45%), Gaps = 12/196 (6%)
Query: 332 LGTGAYGTVYAGKLHNDDWVAIKRFRYR---DTDSID-QVMNEIKLLSSVSHPNLLRLLG 387
LG G +G VY + ++ + ++ + ++ Q+ E+++ S + HPN+LRL G
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 388 CCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIY 447
+ L+ E+ P GT+ + LQ + S Y HS +
Sbjct: 80 YFHDATRVYLILEYAPLGTVYRELQ--KLSRFDEQRTATYITELANALSYCHSKR---VI 134
Query: 448 HRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLSDKS 507
HRDIK N+LL N K+ADFG S + S T GT YL P+ + +K
Sbjct: 135 HRDIKPENLLLGSNGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKV 191
Query: 508 DVYSFGVVLIEIITAL 523
D++S GV+ E + +
Sbjct: 192 DLWSLGVLCYEFLVGM 207
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 93/215 (43%), Gaps = 11/215 (5%)
Query: 332 LGTGAYGTVY-AGKLHNDDWVAIKRFRYR---DTDSIDQVMNEIKLLSSVSHPNLLRLLG 387
LG G++ VY A +H VAIK + + +V NE+K+ + HP++L L
Sbjct: 19 LGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYN 78
Query: 388 CCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIY 447
+ LV E NG + ++L + R YLHS I
Sbjct: 79 YFEDSNYVYLVLEMCHNGEMNRYL-KNRVKPFSENEARHFMHQIITGMLYLHSH---GIL 134
Query: 448 HRDIKSSNILLDYNYRSKVADFGL-SRLGMTESSHISTAPQGTPGYLDPQYHQYFHLSDK 506
HRD+ SN+LL N K+ADFGL ++L M H + GTP Y+ P+ +
Sbjct: 135 HRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLC--GTPNYISPEIATRSAHGLE 192
Query: 507 SDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALA 541
SDV+S G + ++ D + +N LA
Sbjct: 193 SDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLA 227
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 101/212 (47%), Gaps = 15/212 (7%)
Query: 317 KEIEKATSFFSEKHRLGTGAYGTVYAGKL----HNDDWVAIKRFR--YRDTDSIDQVMNE 370
+EIE A+ EK +G+G G V G+L D VAIK + Y + D ++E
Sbjct: 44 REIE-ASRIHIEKI-IGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRD-FLSE 100
Query: 371 IKLLSSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXX 430
++ HPN++RL G ++V E+M NG+L L+ G
Sbjct: 101 ASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQ-FTIMQLVGMLRG 159
Query: 431 XXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRL--GMTESSHISTAPQG 488
YL + HRD+ + N+L+D N KV+DFGLSR+ ++++ +T +
Sbjct: 160 VGAGMRYLS---DLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKI 216
Query: 489 TPGYLDPQYHQYFHLSDKSDVYSFGVVLIEII 520
+ P+ + S SDV+SFGVV+ E++
Sbjct: 217 PIRWTAPEAIAFRTFSSASDVWSFGVVMWEVL 248
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 120/303 (39%), Gaps = 42/303 (13%)
Query: 332 LGTGAYGTVYAGKLHNDDWVAIKRFRYR---DTDSID-QVMNEIKLLSSVSHPNLLRLLG 387
LG G +G VY + ++ + ++ + ++ Q+ E+++ S + HPN+LRL G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 388 CCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIY 447
+ L+ E+ P GT+ + LQ + S Y HS +
Sbjct: 81 YFHDATRVYLILEYAPLGTVYRELQ--KLSKFDEQRTATYITELANALSYCHSKR---VI 135
Query: 448 HRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLSDKS 507
HRDIK N+LL K+ADFG S + S T GT YL P+ + +K
Sbjct: 136 HRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEXIEGRXHDEKV 192
Query: 508 DVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLEPHRDAWTL 567
D++S GV+ E + +P E N RI R D E RD
Sbjct: 193 DLWSLGVLCYEFLVG-------KPPFEANTYQETYKRISR-VEFTFPDFVTEGARD---- 240
Query: 568 SSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHIRVSSWASNIYMGSPAVSCCSLSECGS 627
L R L + RP + EV LEH W I S S C E S
Sbjct: 241 --------LISRLLKHNPSQRPXLREV---LEH----PW---ITANSSKPSNCQNKESAS 282
Query: 628 ERS 630
++S
Sbjct: 283 KQS 285
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 95/197 (48%), Gaps = 11/197 (5%)
Query: 332 LGTGAYGTVYAGKLH----NDDWVAIKRFRYRDTDSIDQ-VMNEIKLLSSVSHPNLLRLL 386
+G G +G V +G+L + VAIK + T+ + + E ++ HPN++RL
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112
Query: 387 GCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPI 446
G + ++V E M NG+L L R+ + YL S M
Sbjct: 113 GVVTKSKPVMIVTEXMENGSLDSFL-RKHDAQFTVIQLVGMLRGIASGMKYL-SDMG--Y 168
Query: 447 YHRDIKSSNILLDYNYRSKVADFGLSRL--GMTESSHISTAPQGTPGYLDPQYHQYFHLS 504
HRD+ + NIL++ N KV+DFGLSR+ E+++ + + + P+ Y +
Sbjct: 169 VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFT 228
Query: 505 DKSDVYSFGVVLIEIIT 521
SDV+S+G+VL E+++
Sbjct: 229 SASDVWSYGIVLWEVMS 245
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 102/229 (44%), Gaps = 26/229 (11%)
Query: 329 KHRLGTGAYGTVYAGKLHN------DDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNL 382
K LG GA+G V+ + +N VA+K + + E +LL+++ H ++
Sbjct: 20 KRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHI 79
Query: 383 LRLLGCCIEEGEP-ILVYEFMPNGTLCQHLQ--------------RERGSGLPWXXXXXX 427
++ G C +G+P I+V+E+M +G L + L+ R+ L
Sbjct: 80 VKFYGVC-GDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHI 138
Query: 428 XXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSR-LGMTESSHISTAP 486
YL S HRD+ + N L+ N K+ DFG+SR + T+ +
Sbjct: 139 ASQIASGMVYLASQH---FVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHT 195
Query: 487 QGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEV 535
++ P+ Y + +SDV+SFGV+L EI T K F ++EV
Sbjct: 196 MLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEV 244
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 125/281 (44%), Gaps = 35/281 (12%)
Query: 332 LGTGAYGTVYAGKLH----NDDWVAIKRFR--YRDTDSIDQVMNEIKLLSSVSHPNLLRL 385
+G G +G V +G L + +VAIK + Y + D ++E ++ HPN++ L
Sbjct: 15 IGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRD-FLSEASIMGQFDHPNVIHL 73
Query: 386 LGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPP 445
G + +++ EFM NG+L L++ G YL + MN
Sbjct: 74 EGVVTKSTPVMIITEFMENGSLDSFLRQNDGQ-FTVIQLVGMLRGIAAGMKYL-ADMN-- 129
Query: 446 IYHRDIKSSNILLDYNYRSKVADFGLSRL---GMTESSHISTAPQGTP-GYLDPQYHQYF 501
HR + + NIL++ N KV+DFGLSR ++ ++ S P + P+ QY
Sbjct: 130 YVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYR 189
Query: 502 HLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPY-LEP 560
+ SDV+S+G+V+ E+++ + RP+ D + ++ I Y L P
Sbjct: 190 KFTSASDVWSYGIVMWEVMSYGE-----RPY---------WDMTNQDVINAIEQDYRLPP 235
Query: 561 HRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHI 601
D S++H +L C R+ RP ++ L+ +
Sbjct: 236 PMDC--PSALH---QLMLDCWQKDRNHRPKFGQIVNTLDKM 271
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 127/292 (43%), Gaps = 31/292 (10%)
Query: 317 KEIEKATSFFSEKHRLGTGAYGTVYAGKLH----NDDWVAIKRFRYRDTDSIDQ-VMNEI 371
KEIE S + + +G G +G V +G+L + VAIK + T+ + + E
Sbjct: 17 KEIE--ASCITIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEA 74
Query: 372 KLLSSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXX 431
++ HPN++ L G + ++V E+M NG+L L++ G
Sbjct: 75 SIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQ-FTVIQLVGMLRGI 133
Query: 432 XXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRL--GMTESSHISTAPQGT 489
YL S M HRD+ + NIL++ N KV+DFGLSR+ E+++ + +
Sbjct: 134 SAGMKYL-SDMG--YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP 190
Query: 490 PGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGC 549
+ P+ + + SDV+S+G+V+ E+++ RP+ E+
Sbjct: 191 IRWTAPEAIAFRKFTSASDVWSYGIVMWEVVSY-----GERPYWEMT------------- 232
Query: 550 VDEIIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHI 601
++I E +R + + +L C R+ RP E+ L+ +
Sbjct: 233 NQDVIKAVEEGYRLPSPMDCPAALYQLMLDCWQKERNSRPKFDEIVNMLDKL 284
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 120/303 (39%), Gaps = 42/303 (13%)
Query: 332 LGTGAYGTVYAGKLHNDDWVAIKRFRYR---DTDSID-QVMNEIKLLSSVSHPNLLRLLG 387
LG G +G VY + ++ + ++ + ++ Q+ E+++ S + HPN+LRL G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 388 CCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIY 447
+ L+ E+ P GT+ + LQ + S Y HS +
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQ--KLSKFDEQRTATYITELANALSYCHSKR---VI 130
Query: 448 HRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLSDKS 507
HRDIK N+LL K+ADFG S + S T GT YL P+ + +K
Sbjct: 131 HRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKV 187
Query: 508 DVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLEPHRDAWTL 567
D++S GV+ E + +P E N RI R D E RD
Sbjct: 188 DLWSLGVLCYEFLVG-------KPPFEANTYQETYKRISR-VEFTFPDFVTEGARD---- 235
Query: 568 SSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHIRVSSWASNIYMGSPAVSCCSLSECGS 627
L R L + RP + EV LEH W I S S C E S
Sbjct: 236 --------LISRLLKHNPSQRPMLREV---LEH----PW---ITANSSKPSNCQNKESAS 277
Query: 628 ERS 630
++S
Sbjct: 278 KQS 280
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 101/213 (47%), Gaps = 18/213 (8%)
Query: 326 FSEKH-----RLGTGAYGTVYAGKL-----HNDDWVAIKRFRYRDTDSIDQVMNEIKLLS 375
F E+H +LG G +G+V + + + VA+K+ ++ + + EI++L
Sbjct: 8 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 67
Query: 376 SVSHPNLLRLLGCCIEEGEP--ILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXX 433
S+ H N+++ G C G L+ E++P G+L +LQ+ + +
Sbjct: 68 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQICK 126
Query: 434 XXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSR-LGMTESSHISTAPQGTPGY 492
YL + HR++ + NIL++ R K+ DFGL++ L + + P +P +
Sbjct: 127 GMEYLGTKR---YIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIF 183
Query: 493 -LDPQYHQYFHLSDKSDVYSFGVVLIEIITALK 524
P+ S SDV+SFGVVL E+ T ++
Sbjct: 184 WYAPESLTESKFSVASDVWSFGVVLYELFTYIE 216
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 120/303 (39%), Gaps = 42/303 (13%)
Query: 332 LGTGAYGTVYAGKLHNDDWVAIKRFRYR---DTDSID-QVMNEIKLLSSVSHPNLLRLLG 387
LG G +G VY + ++ + ++ + ++ Q+ E+++ S + HPN+LRL G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 388 CCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIY 447
+ L+ E+ P GT+ + LQ + S Y HS +
Sbjct: 81 YFHDATRVYLILEYAPLGTVYRELQ--KLSKFDEQRTATYITELANALSYCHSKR---VI 135
Query: 448 HRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLSDKS 507
HRDIK N+LL K+ADFG S + S T GT YL P+ + +K
Sbjct: 136 HRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKV 192
Query: 508 DVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLEPHRDAWTL 567
D++S GV+ E + +P E N RI R D E RD
Sbjct: 193 DLWSLGVLCYEFLVG-------KPPFEANTYQETYKRISR-VEFTFPDFVTEGARD---- 240
Query: 568 SSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHIRVSSWASNIYMGSPAVSCCSLSECGS 627
L R L + RP + EV LEH W I S S C E S
Sbjct: 241 --------LISRLLKHNPSQRPMLREV---LEH----PW---ITANSSKPSNCQNKESAS 282
Query: 628 ERS 630
++S
Sbjct: 283 KQS 285
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 99/216 (45%), Gaps = 30/216 (13%)
Query: 332 LGTGAYGTVYAGK---LHNDD-----WVAIKRFRYRDTDS-IDQVMNEIKLLSSV-SHPN 381
LG GA+G V + L D VA+K + T+ + +++E++++ + H N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 382 LLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHS- 440
++ LLG C ++G ++ E+ G L ++LQ R GL + L S
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSC 155
Query: 441 ----------AMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTP 490
+ HRD+ + N+L+ + K+ADFGL+R + HI + T
Sbjct: 156 AYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLAR----DIHHIDXXKKTTN 211
Query: 491 GYLDPQYHQYFHLSDK-----SDVYSFGVVLIEIIT 521
G L ++ L D+ SDV+SFGV+L EI T
Sbjct: 212 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 92/195 (47%), Gaps = 10/195 (5%)
Query: 332 LGTGAYGTVYAGKLHNDDW----VAIKRFRYRDT-DSIDQVMNEIKLLSSVSHPNLLRLL 386
LG G +G VY G N VA+K + T D+ ++ M+E ++ ++ HP++++L+
Sbjct: 32 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 91
Query: 387 GCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPI 446
G IEE ++ E P G L +L+R + S L YL S
Sbjct: 92 GI-IEEEPTWIIMELYPYGELGHYLERNKNS-LKVLTLVLYSLQICKAMAYLESI---NC 146
Query: 447 YHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLSDK 506
HRDI NIL+ K+ DFGLSR E + ++ + ++ P+ + +
Sbjct: 147 VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTA 206
Query: 507 SDVYSFGVVLIEIIT 521
SDV+ F V + EI++
Sbjct: 207 SDVWMFAVCMWEILS 221
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 120/303 (39%), Gaps = 42/303 (13%)
Query: 332 LGTGAYGTVYAGKLHNDDWVAIKRFRYR---DTDSID-QVMNEIKLLSSVSHPNLLRLLG 387
LG G +G VY + ++ + ++ + ++ Q+ E+++ S + HPN+LRL G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 388 CCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIY 447
+ L+ E+ P GT+ + LQ + S Y HS +
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQ--KLSKFDEQRTATYITELANALSYCHSKR---VI 133
Query: 448 HRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLSDKS 507
HRDIK N+LL K+ADFG S + S A GT YL P+ + +K
Sbjct: 134 HRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRAALCGTLDYLPPEMIEGRMHDEKV 190
Query: 508 DVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLEPHRDAWTL 567
D++S GV+ E + +P E N RI R D E RD
Sbjct: 191 DLWSLGVLCYEFLVG-------KPPFEANTYQETYKRISR-VEFTFPDFVTEGARD---- 238
Query: 568 SSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHIRVSSWASNIYMGSPAVSCCSLSECGS 627
L R L + RP + EV LEH W I S S C E S
Sbjct: 239 --------LISRLLKHNPSQRPMLREV---LEH----PW---ITANSSKPSNCQNKESAS 280
Query: 628 ERS 630
++S
Sbjct: 281 KQS 283
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 90/196 (45%), Gaps = 8/196 (4%)
Query: 326 FSEKHRLGTGAYGTVY-AGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLR 384
++ ++G GA GTVY A + VAI++ + + ++NEI ++ +PN++
Sbjct: 22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVN 81
Query: 385 LLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNP 444
L + E +V E++ G+L + + + +LHS
Sbjct: 82 YLDSYLVGDELWVVMEYLAGGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLHSNQ-- 136
Query: 445 PIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLS 504
+ HRDIKS NILL + K+ DFG E S ST GTP ++ P+
Sbjct: 137 -VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTM-VGTPYWMAPEVVTRKAYG 194
Query: 505 DKSDVYSFGVVLIEII 520
K D++S G++ IE+I
Sbjct: 195 PKVDIWSLGIMAIEMI 210
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 120/303 (39%), Gaps = 42/303 (13%)
Query: 332 LGTGAYGTVYAGKLHNDDWVAIKRFRYR---DTDSID-QVMNEIKLLSSVSHPNLLRLLG 387
LG G +G VY + ++ + ++ + ++ Q+ E+++ S + HPN+LRL G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 388 CCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIY 447
+ L+ E+ P GT+ + LQ + S Y HS +
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQ--KLSKFDEQRTATYITELANALSYCHSKR---VI 133
Query: 448 HRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLSDKS 507
HRDIK N+LL K+ADFG S + S T GT YL P+ + +K
Sbjct: 134 HRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKV 190
Query: 508 DVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLEPHRDAWTL 567
D++S GV+ E + +P E N RI R D E RD
Sbjct: 191 DLWSLGVLCYEFLVG-------KPPFEANTYQETYKRISRVEFT-FPDFVTEGARD---- 238
Query: 568 SSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHIRVSSWASNIYMGSPAVSCCSLSECGS 627
L R L + RP + EV LEH W I S S C E S
Sbjct: 239 --------LISRLLKHNPSQRPMLREV---LEH----PW---ITANSSKPSNCQNKESAS 280
Query: 628 ERS 630
++S
Sbjct: 281 KQS 283
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 92/195 (47%), Gaps = 10/195 (5%)
Query: 332 LGTGAYGTVYAGKLHNDDW----VAIKRFRYRDT-DSIDQVMNEIKLLSSVSHPNLLRLL 386
LG G +G VY G N VA+K + T D+ ++ M+E ++ ++ HP++++L+
Sbjct: 16 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 75
Query: 387 GCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPI 446
G IEE ++ E P G L +L+R + S L YL S
Sbjct: 76 GI-IEEEPTWIIMELYPYGELGHYLERNKNS-LKVLTLVLYSLQICKAMAYLESI---NC 130
Query: 447 YHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLSDK 506
HRDI NIL+ K+ DFGLSR E + ++ + ++ P+ + +
Sbjct: 131 VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTA 190
Query: 507 SDVYSFGVVLIEIIT 521
SDV+ F V + EI++
Sbjct: 191 SDVWMFAVCMWEILS 205
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 93/220 (42%), Gaps = 19/220 (8%)
Query: 332 LGTGAYGTVYAGKLHNDDWVAIKRFRYR---DTDSID-QVMNEIKLLSSVSHPNLLRLLG 387
LG G +G VY + ++ + ++ + ++ Q+ E+++ S + HPN+LRL G
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 388 CCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIY 447
+ L+ E+ P GT+ + LQ + S Y HS +
Sbjct: 77 YFHDATRVYLILEYAPLGTVYRELQ--KLSKFDEQRTATYITELANALSYCHSKR---VI 131
Query: 448 HRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLSDKS 507
HRDIK N+LL K+ADFG S S T GT YL P+ + +K
Sbjct: 132 HRDIKPENLLLGSAGELKIADFGWS---CHAPSSRRTTLSGTLDYLPPEMIEGRMHDEKV 188
Query: 508 DVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGR 547
D++S GV+ E + +P E N RI R
Sbjct: 189 DLWSLGVLCYEFLVG-------KPPFEANTYQETYKRISR 221
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 92/195 (47%), Gaps = 10/195 (5%)
Query: 332 LGTGAYGTVYAGKLHNDDW----VAIKRFRYRDT-DSIDQVMNEIKLLSSVSHPNLLRLL 386
LG G +G VY G N VA+K + T D+ ++ M+E ++ ++ HP++++L+
Sbjct: 20 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 79
Query: 387 GCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPI 446
G IEE ++ E P G L +L+R + S L YL S
Sbjct: 80 GI-IEEEPTWIIMELYPYGELGHYLERNKNS-LKVLTLVLYSLQICKAMAYLESI---NC 134
Query: 447 YHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLSDK 506
HRDI NIL+ K+ DFGLSR E + ++ + ++ P+ + +
Sbjct: 135 VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTA 194
Query: 507 SDVYSFGVVLIEIIT 521
SDV+ F V + EI++
Sbjct: 195 SDVWMFAVCMWEILS 209
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 120/303 (39%), Gaps = 42/303 (13%)
Query: 332 LGTGAYGTVYAGKLHNDDWVAIKRFRYR---DTDSID-QVMNEIKLLSSVSHPNLLRLLG 387
LG G +G VY + ++ + ++ + ++ Q+ E+++ S + HPN+LRL G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 388 CCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIY 447
+ L+ E+ P GT+ + LQ + S Y HS +
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQ--KLSKFDEQRTATYITELANALSYCHSKR---VI 130
Query: 448 HRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLSDKS 507
HRDIK N+LL K+ADFG S + S T GT YL P+ + +K
Sbjct: 131 HRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTELCGTLDYLPPEMIEGRMHDEKV 187
Query: 508 DVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLEPHRDAWTL 567
D++S GV+ E + +P E N RI R D E RD
Sbjct: 188 DLWSLGVLCYEFLVG-------KPPFEANTYQETYKRISR-VEFTFPDFVTEGARD---- 235
Query: 568 SSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHIRVSSWASNIYMGSPAVSCCSLSECGS 627
L R L + RP + EV LEH W I S S C E S
Sbjct: 236 --------LISRLLKHNPSQRPMLREV---LEH----PW---ITANSSKPSNCQNKESAS 277
Query: 628 ERS 630
++S
Sbjct: 278 KQS 280
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 97/212 (45%), Gaps = 15/212 (7%)
Query: 317 KEIEKATSFFSEKHRLGTGAYGTVYAGKL----HNDDWVAIKRFR--YRDTDSIDQVMNE 370
+EIE A+ EK +G+G G V G+L D VAIK + Y + D ++E
Sbjct: 44 REIE-ASRIHIEKI-IGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRD-FLSE 100
Query: 371 IKLLSSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXX 430
++ HPN++RL G ++V E+M NG+L L+ G
Sbjct: 101 ASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQ-FTIMQLVGMLRG 159
Query: 431 XXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGT- 489
YL + HRD+ + N+L+D N KV+DFGLSR+ + T G
Sbjct: 160 VGAGMRYLS---DLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKI 216
Query: 490 -PGYLDPQYHQYFHLSDKSDVYSFGVVLIEII 520
+ P+ + S SDV+SFGVV+ E++
Sbjct: 217 PIRWTAPEAIAFRTFSSASDVWSFGVVMWEVL 248
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 108/243 (44%), Gaps = 17/243 (6%)
Query: 288 RSTSLRNQLSAKRLLCQAAGNSSVPFYPYKEIEKATSFFSEKHRLGTGAYGTVYAGKLHN 347
R +LR L + L+ + P I K T F K LG+GA+GTVY G
Sbjct: 14 RKRTLRRLLQERELVEPLTPSGEAPNQALLRILKETEFKKIK-VLGSGAFGTVYKGLWIP 72
Query: 348 DDW-----VAIKRFRYRDTDSID-QVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEF 401
+ VAI R + + ++++E +++SV +P++ RLLG C+ L+ +
Sbjct: 73 EGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQL 131
Query: 402 MPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYN 461
MP G L ++ RE + YL + HRD+ + N+L+
Sbjct: 132 MPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTP 187
Query: 462 YRSKVADFGLSRLGMTESSHISTAPQGTP---GYLDPQYHQYFHLSDKSDVYSFGVVLIE 518
K+ DFGL++L E P L+ H+ + + +SDV+S+GV + E
Sbjct: 188 QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY--THQSDVWSYGVTVWE 245
Query: 519 IIT 521
++T
Sbjct: 246 LMT 248
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 127/296 (42%), Gaps = 37/296 (12%)
Query: 317 KEIEKATSFFSEKHRLGTGAYGTVYAGKLH----NDDWVAIKRFRYRDTD-SIDQVMNEI 371
KEI+ S+ + +G G +G V G+L + VAIK + T+ + ++E
Sbjct: 11 KEID--VSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEA 68
Query: 372 KLLSSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXX 431
++ HPN++RL G +++ EFM NG L L+ G
Sbjct: 69 SIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQ-FTVIQLVGMLRGI 127
Query: 432 XXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPG 491
YL HRD+ + NIL++ N KV+DFGLSR + E+S T G
Sbjct: 128 ASGMRYLAEM---SYVHRDLAARNILVNSNLVCKVSDFGLSRF-LEENSSDPTETSSLGG 183
Query: 492 -----YLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIG 546
+ P+ + + SD +S+G+V+ E+++ + RP+ +++
Sbjct: 184 KIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGE-----RPYWDMS---------N 229
Query: 547 RGCVDEIIDPY-LEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHI 601
+ ++ I Y L P D T S+H +L C R+ RP +V L+ +
Sbjct: 230 QDVINAIEQDYRLPPPPDCPT--SLH---QLMLDCWQKDRNARPRFPQVVSALDKM 280
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 84/196 (42%), Gaps = 11/196 (5%)
Query: 332 LGTGAYGTVYAGKLHNDDWV----AIKRFRYRDTDSIDQVMNEIKLLSSVS-HPNLLRLL 386
+G G+Y V +L D + +K+ D + ID V E + S HP L+ L
Sbjct: 28 IGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLH 87
Query: 387 GCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPI 446
C E V E++ G L H+QR+R LP YLH I
Sbjct: 88 SCFQTESRLFFVIEYVNGGDLMFHMQRQRK--LPEEHARFYSAEISLALNYLHER---GI 142
Query: 447 YHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLSDK 506
+RD+K N+LLD K+ D+G+ + G+ S GTP Y+ P+ +
Sbjct: 143 IYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFC-GTPNYIAPEILRGEDYGFS 201
Query: 507 SDVYSFGVVLIEIITA 522
D ++ GV++ E++
Sbjct: 202 VDWWALGVLMFEMMAG 217
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 98/213 (46%), Gaps = 18/213 (8%)
Query: 326 FSEKH-----RLGTGAYGTVYAGKL-----HNDDWVAIKRFRYRDTDSIDQVMNEIKLLS 375
F E+H +LG G +G+V + + + VA+K+ ++ + + EI++L
Sbjct: 10 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 69
Query: 376 SVSHPNLLRLLGCCIEEGEP--ILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXX 433
S+ H N+++ G C G L+ E++P G+L +LQ +
Sbjct: 70 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-AHAERIDHIKLLQYTSQICK 128
Query: 434 XXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSR-LGMTESSHISTAPQGTPGY 492
YL + HRD+ + NIL++ R K+ DFGL++ L + P +P +
Sbjct: 129 GMEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF 185
Query: 493 -LDPQYHQYFHLSDKSDVYSFGVVLIEIITALK 524
P+ S SDV+SFGVVL E+ T ++
Sbjct: 186 WYAPESLTESKFSVASDVWSFGVVLYELFTYIE 218
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 97/212 (45%), Gaps = 18/212 (8%)
Query: 324 SFFSEKH-----RLGTGAYGTVYAGKL-----HNDDWVAIKRFRYRDTDSIDQVMNEIKL 373
+ F E+H +LG G +G+V + + VA+K+ ++ D EI++
Sbjct: 2 TIFEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQI 61
Query: 374 LSSVSHPNLLRLLGCCIEEGEP--ILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXX 431
L ++ +++ G G P LV E++P+G L LQR R L
Sbjct: 62 LKALHSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRAR-LDASRLLLYSSQI 120
Query: 432 XXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSR-LGMTESSHISTAPQGTP 490
YL S HRD+ + NIL++ K+ADFGL++ L + + + P +P
Sbjct: 121 CKGMEYLGSRR---CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSP 177
Query: 491 -GYLDPQYHQYFHLSDKSDVYSFGVVLIEIIT 521
+ P+ S +SDV+SFGVVL E+ T
Sbjct: 178 IFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 97/198 (48%), Gaps = 13/198 (6%)
Query: 332 LGTGAYGTVYAGKLH----NDDWVAIKRFR--YRDTDSIDQVMNEIKLLSSVSHPNLLRL 385
+G G +G V +G+L + VAIK + Y D D ++E ++ HPN++ L
Sbjct: 37 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRD-FLSEASIMGQFDHPNIIHL 95
Query: 386 LGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPP 445
G + +++ E+M NG+L L++ G YL S M+
Sbjct: 96 EGVVTKCKPVMIITEYMENGSLDAFLRKNDGR-FTVIQLVGMLRGIGSGMKYL-SDMSA- 152
Query: 446 IYHRDIKSSNILLDYNYRSKVADFGLSRL--GMTESSHISTAPQGTPGYLDPQYHQYFHL 503
HRD+ + NIL++ N KV+DFG+SR+ E+++ + + + P+ Y
Sbjct: 153 -VHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKF 211
Query: 504 SDKSDVYSFGVVLIEIIT 521
+ SDV+S+G+V+ E+++
Sbjct: 212 TSASDVWSYGIVMWEVMS 229
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 119/303 (39%), Gaps = 42/303 (13%)
Query: 332 LGTGAYGTVYAGKLHNDDWVAIKRFRYR---DTDSID-QVMNEIKLLSSVSHPNLLRLLG 387
LG G +G VY + ++ + ++ + ++ Q+ E+++ S + HPN+LRL G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 388 CCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIY 447
+ L+ E+ P G + + LQ + S Y HS +
Sbjct: 81 YFHDATRVYLILEYAPRGEVYKELQ--KLSKFDEQRTATYITELANALSYCHSKR---VI 135
Query: 448 HRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLSDKS 507
HRDIK N+LL K+ADFG S + S T GT YL P+ + +K
Sbjct: 136 HRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKV 192
Query: 508 DVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLEPHRDAWTL 567
D++S GV+ E + +P E N RI R D E RD
Sbjct: 193 DLWSLGVLCYEFLVG-------KPPFEANTYQETYKRISRVEFT-FPDFVTEGARD---- 240
Query: 568 SSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHIRVSSWASNIYMGSPAVSCCSLSECGS 627
L R L + RP + EV LEH W I S S C E S
Sbjct: 241 --------LISRLLKHNPSQRPMLREV---LEH----PW---ITANSSKPSNCQNKESAS 282
Query: 628 ERS 630
++S
Sbjct: 283 KQS 285
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 94/220 (42%), Gaps = 19/220 (8%)
Query: 332 LGTGAYGTVYAGKLHNDDWVAIKRFRYR---DTDSID-QVMNEIKLLSSVSHPNLLRLLG 387
LG G +G VY + ++ + ++ + ++ Q+ E+++ S + HPN+LRL G
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 388 CCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIY 447
+ L+ E+ P GT+ + LQ + S Y HS +
Sbjct: 77 YFHDATRVYLILEYAPLGTVYRELQ--KLSKFDEQRTATYITELANALSYCHSKR---VI 131
Query: 448 HRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLSDKS 507
HRDIK N+LL K+ADFG S + S T GT YL P+ + +K
Sbjct: 132 HRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKV 188
Query: 508 DVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGR 547
D++S GV+ E + +P E N RI R
Sbjct: 189 DLWSLGVLCYEFLVG-------KPPFEANTYQETYKRISR 221
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 104/237 (43%), Gaps = 15/237 (6%)
Query: 328 EKHRLGTGAYGTVYAGKLH-----NDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNL 382
E LG+G +GTV G V I + D D+++ E ++ + +P +
Sbjct: 373 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 432
Query: 383 LRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAM 442
+R++G C E +LV E G L ++LQ+ R + YL +
Sbjct: 433 VRMIGICEAESW-MLVMEMAELGPLNKYLQQNRH--VKDKNIIELVHQVSMGMKYLEESN 489
Query: 443 NPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGT--PGYLDPQYHQY 500
HRD+ + N+LL + +K++DFGLS+ + ++ G + P+ Y
Sbjct: 490 ---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINY 546
Query: 501 FHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIG--RGCVDEIID 555
+ S KSDV+SFGV++ E + + SEV +R+G GC E+ D
Sbjct: 547 YKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREMYD 603
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 95/210 (45%), Gaps = 27/210 (12%)
Query: 332 LGTGAYGTVYAGKLHNDDW----VAIKRFRYRDTD--SIDQVMNEIKLLSSVSHPNLLRL 385
LG G +G+V G L +D VA+K + ++ I++ ++E + SHPN++RL
Sbjct: 42 LGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRL 101
Query: 386 LGCCIEEG-----EPILVYEFMPNGTLCQHLQRER----GSGLPWXXXXXXXXXXXXXXX 436
LG CIE +P+++ FM G L +L R +P
Sbjct: 102 LGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGME 161
Query: 437 YLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQ 496
YL N HRD+ + N +L + VADFGLS+ + + QG + +
Sbjct: 162 YLS---NRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYY----RQGRIAKMPVK 214
Query: 497 YHQYFHLSD-----KSDVYSFGVVLIEIIT 521
+ L+D KSDV++FGV + EI T
Sbjct: 215 WIAIESLADRVYTSKSDVWAFGVTMWEIAT 244
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 94/197 (47%), Gaps = 12/197 (6%)
Query: 332 LGTGAYGTVYAGKLHNDDW-----VAIKRFRYRDTDSID-QVMNEIKLLSSVSHPNLLRL 385
LG+GA+GTVY G D VAIK R + + ++++E +++ V P + RL
Sbjct: 25 LGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVSRL 84
Query: 386 LGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPP 445
LG C+ LV + MP G L H++ RG L YL
Sbjct: 85 LGICLTSTVQ-LVTQLMPYGCLLDHVRENRGR-LGSQDLLNWCMQIAKGMSYLEDVR--- 139
Query: 446 IYHRDIKSSNILLDYNYRSKVADFGLSR-LGMTESSHISTAPQGTPGYLDPQYHQYFHLS 504
+ HRD+ + N+L+ K+ DFGL+R L + E+ + + + ++ + +
Sbjct: 140 LVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILRRRFT 199
Query: 505 DKSDVYSFGVVLIEIIT 521
+SDV+S+GV + E++T
Sbjct: 200 HQSDVWSYGVTVWELMT 216
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 99/204 (48%), Gaps = 17/204 (8%)
Query: 326 FSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYRDTDS---IDQVMNEIKLLSSVSHPN 381
F + ++G G YG VY + + VA+K+ R DT++ + EI LL ++HPN
Sbjct: 12 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL-DTETEGVPSTAIREISLLKELNHPN 70
Query: 382 LLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSA 441
+++LL E + LV+EF+ + L + + +G+P + HS
Sbjct: 71 IVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 129
Query: 442 MNPPIYHRDIKSSNILLDYNYRSKVADFGLSR-LGMTESSHISTAPQGTPGYLDPQY--- 497
+ HRD+K N+L++ K+ADFGL+R G+ ++ T T Y P+
Sbjct: 130 R---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWYRAPEILLG 184
Query: 498 HQYFHLSDKSDVYSFGVVLIEIIT 521
+Y+ S D++S G + E++T
Sbjct: 185 XKYY--STAVDIWSLGCIFAEMVT 206
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 94/220 (42%), Gaps = 19/220 (8%)
Query: 332 LGTGAYGTVYAGKLHNDDWVAIKRFRYR---DTDSID-QVMNEIKLLSSVSHPNLLRLLG 387
LG G +G VY + ++ + ++ + ++ Q+ E+++ S + HPN+LRL G
Sbjct: 20 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 388 CCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIY 447
+ L+ E+ P GT+ + LQ + S Y HS +
Sbjct: 80 YFHDATRVYLILEYAPLGTVYRELQ--KLSKFDEQRTATYITELANALSYCHSKR---VI 134
Query: 448 HRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLSDKS 507
HRDIK N+LL K+ADFG S + S T GT YL P+ + +K
Sbjct: 135 HRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKV 191
Query: 508 DVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGR 547
D++S GV+ E + +P E N RI R
Sbjct: 192 DLWSLGVLCYEFLVG-------KPPFEANTYQETYKRISR 224
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 130/308 (42%), Gaps = 50/308 (16%)
Query: 332 LGTGAYGTVYAGK---LHNDD-----WVAIKRFRYRDTDS-IDQVMNEIKLLSSV-SHPN 381
LG GA+G V + L D VA+K + T+ + +++E++++ + H N
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 136
Query: 382 LLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHS- 440
++ LLG C ++G ++ E+ G L ++LQ R GL + L S
Sbjct: 137 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 196
Query: 441 ----------AMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTP 490
+ HRD+ + N+L+ + K+ADFGL+R + HI + T
Sbjct: 197 AYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLAR----DIHHIDYYKKTTN 252
Query: 491 GYLDPQYHQYFHLSDK-----SDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRI 545
G L ++ L D+ SDV+SFGV+L EI T P+ V
Sbjct: 253 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTL-----GGSPYPGV---------- 297
Query: 546 GRGCVDEIIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHIRVSS 605
V+E+ E HR + + + + C RPT ++ E+L+ R+ +
Sbjct: 298 ---PVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD--RIVA 352
Query: 606 WASNIYMG 613
SN MG
Sbjct: 353 LTSNQEMG 360
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 112/275 (40%), Gaps = 51/275 (18%)
Query: 335 GAYGTVYAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIE--- 391
G +G V+ +L ND +VA+K F +D S Q EI + H NLL+ +
Sbjct: 26 GRFGCVWKAQLMND-FVAVKIFPLQDKQSW-QSEREIFSTPGMKHENLLQFIAAEKRGSN 83
Query: 392 -EGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAM-------- 442
E E L+ F G+L +L +G+ + W YLH +
Sbjct: 84 LEVELWLITAFHDKGSLTDYL---KGNIITWNELCHVAETMSRGLSYLHEDVPWCRGEGH 140
Query: 443 NPPIYHRDIKSSNILLDYNYRSKVADFGLS-RLGMTESSHISTAPQGTPGYLDPQYHQ-- 499
P I HRD KS N+LL + + +ADFGL+ R + + GT Y+ P+ +
Sbjct: 141 KPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYMAPEVLEGA 200
Query: 500 -YFHLSD--KSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDP 556
F + D+Y+ G+VL E+++ K D G VDE + P
Sbjct: 201 INFQRDAFLRIDMYAMGLVLWELVSRCKAAD--------------------GPVDEYMLP 240
Query: 557 YLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTM 591
+ E +L + V H+ MRPT+
Sbjct: 241 FEEEIGQHPSLEELQEV--------VVHKKMRPTI 267
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 104/237 (43%), Gaps = 15/237 (6%)
Query: 328 EKHRLGTGAYGTVYAGKLH-----NDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNL 382
E LG+G +GTV G V I + D D+++ E ++ + +P +
Sbjct: 374 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 433
Query: 383 LRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAM 442
+R++G C E +LV E G L ++LQ+ R + YL +
Sbjct: 434 VRMIGICEAESW-MLVMEMAELGPLNKYLQQNRH--VKDKNIIELVHQVSMGMKYLEESN 490
Query: 443 NPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGT--PGYLDPQYHQY 500
HRD+ + N+LL + +K++DFGLS+ + ++ G + P+ Y
Sbjct: 491 ---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINY 547
Query: 501 FHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIG--RGCVDEIID 555
+ S KSDV+SFGV++ E + + SEV +R+G GC E+ D
Sbjct: 548 YKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREMYD 604
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 94/220 (42%), Gaps = 19/220 (8%)
Query: 332 LGTGAYGTVYAGKLHNDDWVAIKRFRYR---DTDSID-QVMNEIKLLSSVSHPNLLRLLG 387
LG G +G VY + ++ + ++ + ++ Q+ E+++ S + HPN+LRL G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 388 CCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIY 447
+ L+ E+ P GT+ + LQ + S Y HS +
Sbjct: 81 YFHDATRVYLILEYAPLGTVYRELQ--KLSKFDEQRTATYITELANALSYCHSKR---VI 135
Query: 448 HRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLSDKS 507
HRDIK N+LL K+ADFG S + S T GT YL P+ + +K
Sbjct: 136 HRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKV 192
Query: 508 DVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGR 547
D++S GV+ E + +P E N RI R
Sbjct: 193 DLWSLGVLCYEFLVG-------KPPFEANTYQETYKRISR 225
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 99/204 (48%), Gaps = 17/204 (8%)
Query: 326 FSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYRDTDS---IDQVMNEIKLLSSVSHPN 381
F + ++G G YG VY + + VA+K+ R DT++ + EI LL ++HPN
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL-DTETEGVPSTAIREISLLKELNHPN 63
Query: 382 LLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSA 441
+++LL E + LV+EF+ + L + + +G+P + HS
Sbjct: 64 IVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 442 MNPPIYHRDIKSSNILLDYNYRSKVADFGLSR-LGMTESSHISTAPQGTPGYLDPQY--- 497
+ HRD+K N+L++ K+ADFGL+R G+ ++ T T Y P+
Sbjct: 123 R---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWYRAPEILLG 177
Query: 498 HQYFHLSDKSDVYSFGVVLIEIIT 521
+Y+ S D++S G + E++T
Sbjct: 178 XKYY--STAVDIWSLGCIFAEMVT 199
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 99/216 (45%), Gaps = 30/216 (13%)
Query: 332 LGTGAYGTVYAGK---LHNDD-----WVAIKRFRYRDTDS-IDQVMNEIKLLSSV-SHPN 381
LG GA+G V + L D VA+K + T+ + +++E++++ + H N
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 88
Query: 382 LLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHS- 440
++ LLG C ++G ++ E+ G L ++LQ R GL + L S
Sbjct: 89 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 148
Query: 441 ----------AMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTP 490
+ HRD+ + N+L+ + K+ADFGL+R + HI + T
Sbjct: 149 AYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLAR----DIHHIDYYKKTTN 204
Query: 491 GYLDPQYHQYFHLSDK-----SDVYSFGVVLIEIIT 521
G L ++ L D+ SDV+SFGV+L EI T
Sbjct: 205 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 240
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 99/204 (48%), Gaps = 17/204 (8%)
Query: 326 FSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYRDTDS---IDQVMNEIKLLSSVSHPN 381
F + ++G G YG VY + + VA+K+ R DT++ + EI LL ++HPN
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL-DTETEGVPSTAIREISLLKELNHPN 62
Query: 382 LLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSA 441
+++LL E + LV+EF+ + L + + +G+P + HS
Sbjct: 63 IVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 442 MNPPIYHRDIKSSNILLDYNYRSKVADFGLSR-LGMTESSHISTAPQGTPGYLDPQYH-- 498
+ HRD+K N+L++ K+ADFGL+R G+ ++ T T Y P+
Sbjct: 122 R---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWYRAPEILLG 176
Query: 499 -QYFHLSDKSDVYSFGVVLIEIIT 521
+Y+ S D++S G + E++T
Sbjct: 177 CKYY--STAVDIWSLGCIFAEMVT 198
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 99/216 (45%), Gaps = 30/216 (13%)
Query: 332 LGTGAYGTVYAGK---LHNDD-----WVAIKRFRYRDTDS-IDQVMNEIKLLSSV-SHPN 381
LG GA+G V + L D VA+K + T+ + +++E++++ + H N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 382 LLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHS- 440
++ LLG C ++G ++ E+ G L ++LQ R GL + L S
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 441 ----------AMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTP 490
+ HRD+ + N+L+ + K+ADFGL+R + HI + T
Sbjct: 156 AYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLAR----DIHHIDYYKKTTN 211
Query: 491 GYLDPQYHQYFHLSDK-----SDVYSFGVVLIEIIT 521
G L ++ L D+ SDV+SFGV+L EI T
Sbjct: 212 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 94/220 (42%), Gaps = 19/220 (8%)
Query: 332 LGTGAYGTVYAGKLHNDDWVAIKRFRYR---DTDSID-QVMNEIKLLSSVSHPNLLRLLG 387
LG G +G VY + ++ + ++ + ++ Q+ E+++ S + HPN+LRL G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 388 CCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIY 447
+ L+ E+ P GT+ + LQ + S Y HS +
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQ--KLSKFDEQRTATYITELANALSYCHSKR---VI 130
Query: 448 HRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLSDKS 507
HRDIK N+LL K+ADFG S + S T GT YL P+ + +K
Sbjct: 131 HRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKV 187
Query: 508 DVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGR 547
D++S GV+ E + +P E N RI R
Sbjct: 188 DLWSLGVLCYEFLVG-------KPPFEANTYQETYKRISR 220
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 127/296 (42%), Gaps = 37/296 (12%)
Query: 317 KEIEKATSFFSEKHRLGTGAYGTVYAGKLH----NDDWVAIKRFRYRDTD-SIDQVMNEI 371
KEI+ S+ + +G G +G V G+L + VAIK + T+ + ++E
Sbjct: 9 KEID--VSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEA 66
Query: 372 KLLSSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXX 431
++ HPN++RL G +++ EFM NG L L+ G
Sbjct: 67 SIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQ-FTVIQLVGMLRGI 125
Query: 432 XXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPG 491
YL HRD+ + NIL++ N KV+DFGLSR + E+S T G
Sbjct: 126 ASGMRYLAEM---SYVHRDLAARNILVNSNLVCKVSDFGLSRF-LEENSSDPTYTSSLGG 181
Query: 492 -----YLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIG 546
+ P+ + + SD +S+G+V+ E+++ + RP+ +++
Sbjct: 182 KIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGE-----RPYWDMS---------N 227
Query: 547 RGCVDEIIDPY-LEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHI 601
+ ++ I Y L P D T S+H +L C R+ RP +V L+ +
Sbjct: 228 QDVINAIEQDYRLPPPPDCPT--SLH---QLMLDCWQKDRNARPRFPQVVSALDKM 278
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 99/216 (45%), Gaps = 30/216 (13%)
Query: 332 LGTGAYGTVYAGK---LHNDD-----WVAIKRFRYRDTDS-IDQVMNEIKLLSSV-SHPN 381
LG GA+G V + L D VA+K + T+ + +++E++++ + H N
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 87
Query: 382 LLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHS- 440
++ LLG C ++G ++ E+ G L ++LQ R GL + L S
Sbjct: 88 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 147
Query: 441 ----------AMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTP 490
+ HRD+ + N+L+ + K+ADFGL+R + HI + T
Sbjct: 148 AYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLAR----DIHHIDYYKKTTN 203
Query: 491 GYLDPQYHQYFHLSDK-----SDVYSFGVVLIEIIT 521
G L ++ L D+ SDV+SFGV+L EI T
Sbjct: 204 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 239
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 94/198 (47%), Gaps = 13/198 (6%)
Query: 332 LGTGAYGTVYAGKLH----NDDWVAIKRFR--YRDTDSIDQVMNEIKLLSSVSHPNLLRL 385
+G G +G V +G+L + VAIK + Y D D ++E ++ HPN++ L
Sbjct: 22 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRD-FLSEASIMGQFDHPNIIHL 80
Query: 386 LGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPP 445
G + +++ E+M NG+L L++ G YL
Sbjct: 81 EGVVTKCKPVMIITEYMENGSLDAFLRKNDGR-FTVIQLVGMLRGIGSGMKYLSDM---S 136
Query: 446 IYHRDIKSSNILLDYNYRSKVADFGLSRL--GMTESSHISTAPQGTPGYLDPQYHQYFHL 503
HRD+ + NIL++ N KV+DFG+SR+ E+++ + + + P+ Y
Sbjct: 137 YVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKF 196
Query: 504 SDKSDVYSFGVVLIEIIT 521
+ SDV+S+G+V+ E+++
Sbjct: 197 TSASDVWSYGIVMWEVMS 214
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 99/203 (48%), Gaps = 15/203 (7%)
Query: 326 FSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRY-RDTDSI-DQVMNEIKLLSSVSHPNL 382
F + ++G G YG VY + + VA+K+ R +T+ + + EI LL ++HPN+
Sbjct: 12 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 71
Query: 383 LRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAM 442
++LL E + LV+EF+ + L + + +G+P + HS
Sbjct: 72 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 130
Query: 443 NPPIYHRDIKSSNILLDYNYRSKVADFGLSR-LGMTESSHISTAPQGTPGYLDPQYH--- 498
+ HRD+K N+L++ K+ADFGL+R G+ ++ T T Y P+
Sbjct: 131 ---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWYRAPEILLGC 185
Query: 499 QYFHLSDKSDVYSFGVVLIEIIT 521
+Y+ S D++S G + E++T
Sbjct: 186 KYY--STAVDIWSLGCIFAEMVT 206
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 94/220 (42%), Gaps = 19/220 (8%)
Query: 332 LGTGAYGTVYAGKLHNDDWVAIKRFRYR---DTDSID-QVMNEIKLLSSVSHPNLLRLLG 387
LG G +G VY + ++ + ++ + ++ Q+ E+++ S + HPN+LRL G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 388 CCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIY 447
+ L+ E+ P GT+ + LQ + S Y HS +
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQ--KLSKFDEQRTATYITELANALSYCHSKR---VI 130
Query: 448 HRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLSDKS 507
HRDIK N+LL K+ADFG S + S T GT YL P+ + +K
Sbjct: 131 HRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKV 187
Query: 508 DVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGR 547
D++S GV+ E + +P E N RI R
Sbjct: 188 DLWSLGVLCYEFLVG-------KPPFEANTYQETYKRISR 220
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 99/203 (48%), Gaps = 15/203 (7%)
Query: 326 FSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRY-RDTDSI-DQVMNEIKLLSSVSHPNL 382
F + ++G G YG VY + + VA+K+ R +T+ + + EI LL ++HPN+
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 383 LRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAM 442
++LL E + LV+EF+ + L + + +G+P + HS
Sbjct: 66 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 124
Query: 443 NPPIYHRDIKSSNILLDYNYRSKVADFGLSR-LGMTESSHISTAPQGTPGYLDPQYH--- 498
+ HRD+K N+L++ K+ADFGL+R G+ ++ T T Y P+
Sbjct: 125 ---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWYRAPEILLGC 179
Query: 499 QYFHLSDKSDVYSFGVVLIEIIT 521
+Y+ S D++S G + E++T
Sbjct: 180 KYY--STAVDIWSLGCIFAEMVT 200
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 99/204 (48%), Gaps = 17/204 (8%)
Query: 326 FSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYRDTDS---IDQVMNEIKLLSSVSHPN 381
F + ++G G YG VY + + VA+K+ R DT++ + EI LL ++HPN
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL-DTETEGVPSTAIREISLLKELNHPN 63
Query: 382 LLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSA 441
+++LL E + LV+EF+ + L + + +G+P + HS
Sbjct: 64 IVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 442 MNPPIYHRDIKSSNILLDYNYRSKVADFGLSR-LGMTESSHISTAPQGTPGYLDPQYH-- 498
+ HRD+K N+L++ K+ADFGL+R G+ ++ T T Y P+
Sbjct: 123 R---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWYRAPEILLG 177
Query: 499 -QYFHLSDKSDVYSFGVVLIEIIT 521
+Y+ S D++S G + E++T
Sbjct: 178 CKYY--STAVDIWSLGCIFAEMVT 199
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 99/204 (48%), Gaps = 17/204 (8%)
Query: 326 FSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYRDTDS---IDQVMNEIKLLSSVSHPN 381
F + ++G G YG VY + + VA+K+ R DT++ + EI LL ++HPN
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL-DTETEGVPSTAIREISLLKELNHPN 63
Query: 382 LLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSA 441
+++LL E + LV+EF+ + L + + +G+P + HS
Sbjct: 64 IVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 442 MNPPIYHRDIKSSNILLDYNYRSKVADFGLSR-LGMTESSHISTAPQGTPGYLDPQYH-- 498
+ HRD+K N+L++ K+ADFGL+R G+ ++ T T Y P+
Sbjct: 123 R---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWYRAPEILLG 177
Query: 499 -QYFHLSDKSDVYSFGVVLIEIIT 521
+Y+ S D++S G + E++T
Sbjct: 178 CKYY--STAVDIWSLGCIFAEMVT 199
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 99/204 (48%), Gaps = 17/204 (8%)
Query: 326 FSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYRDTDS---IDQVMNEIKLLSSVSHPN 381
F + ++G G YG VY + + VA+K+ R DT++ + EI LL ++HPN
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL-DTETEGVPSTAIREISLLKELNHPN 62
Query: 382 LLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSA 441
+++LL E + LV+EF+ + L + + +G+P + HS
Sbjct: 63 IVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 442 MNPPIYHRDIKSSNILLDYNYRSKVADFGLSR-LGMTESSHISTAPQGTPGYLDPQYH-- 498
+ HRD+K N+L++ K+ADFGL+R G+ ++ T T Y P+
Sbjct: 122 R---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWYRAPEILLG 176
Query: 499 -QYFHLSDKSDVYSFGVVLIEIIT 521
+Y+ S D++S G + E++T
Sbjct: 177 CKYY--STAVDIWSLGCIFAEMVT 198
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 95/200 (47%), Gaps = 18/200 (9%)
Query: 332 LGTGAYGTVYAGKLHNDDW-----VAIKRFRYRDTDSID-QVMNEIKLLSSVSHPNLLRL 385
LG+GA+GTVY G + VAIK + + M+E +++S+ HP+L+RL
Sbjct: 46 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 105
Query: 386 LGCCIEEGEPILVYEFMPNGTLCQHLQRER---GSGLPWXXXXXXXXXXXXXXXYLHSAM 442
LG C+ LV + MP+G L +++ + GS L YL
Sbjct: 106 LGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIGSQL----LLNWCVQIAKGMMYLEERR 160
Query: 443 NPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTP-GYLDPQYHQYF 501
+ HRD+ + N+L+ K+ DFGL+RL + + P ++ + Y
Sbjct: 161 ---LVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYR 217
Query: 502 HLSDKSDVYSFGVVLIEIIT 521
+ +SDV+S+GV + E++T
Sbjct: 218 KFTHQSDVWSYGVTIWELMT 237
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 94/220 (42%), Gaps = 19/220 (8%)
Query: 332 LGTGAYGTVYAGKLHNDDWVAIKRFRYR---DTDSID-QVMNEIKLLSSVSHPNLLRLLG 387
LG G +G VY + ++ + ++ + ++ Q+ E+++ S + HPN+LRL G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 388 CCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIY 447
+ L+ E+ P GT+ + LQ + S Y HS +
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQ--KLSKFDEQRTATYITELANALSYCHSKR---VI 133
Query: 448 HRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLSDKS 507
HRDIK N+LL K+ADFG S + S T GT YL P+ + +K
Sbjct: 134 HRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKV 190
Query: 508 DVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGR 547
D++S GV+ E + +P E N RI R
Sbjct: 191 DLWSLGVLCYEFLVG-------KPPFEANTYQETYKRISR 223
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 94/220 (42%), Gaps = 19/220 (8%)
Query: 332 LGTGAYGTVYAGKLHNDDWVAIKRFRYR---DTDSID-QVMNEIKLLSSVSHPNLLRLLG 387
LG G +G VY + ++ + ++ + ++ Q+ E+++ S + HPN+LRL G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 388 CCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIY 447
+ L+ E+ P GT+ + LQ + S Y HS +
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQ--KLSKFDEQRTATYITELANALSYCHSKR---VI 130
Query: 448 HRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLSDKS 507
HRDIK N+LL K+ADFG S + S T GT YL P+ + +K
Sbjct: 131 HRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTXLCGTLDYLPPEMIEGRMHDEKV 187
Query: 508 DVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGR 547
D++S GV+ E + +P E N RI R
Sbjct: 188 DLWSLGVLCYEFLVG-------KPPFEANTYQETYKRISR 220
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 99/204 (48%), Gaps = 17/204 (8%)
Query: 326 FSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYRDTDS---IDQVMNEIKLLSSVSHPN 381
F + ++G G YG VY + + VA+K+ R DT++ + EI LL ++HPN
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL-DTETEGVPSTAIREISLLKELNHPN 63
Query: 382 LLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSA 441
+++LL E + LV+EF+ + L + + +G+P + HS
Sbjct: 64 IVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLSFCHSH 122
Query: 442 MNPPIYHRDIKSSNILLDYNYRSKVADFGLSR-LGMTESSHISTAPQGTPGYLDPQYH-- 498
+ HRD+K N+L++ K+ADFGL+R G+ ++ T T Y P+
Sbjct: 123 R---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWYRAPEILLG 177
Query: 499 -QYFHLSDKSDVYSFGVVLIEIIT 521
+Y+ S D++S G + E++T
Sbjct: 178 CKYY--STAVDIWSLGCIFAEMVT 199
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 93/212 (43%), Gaps = 21/212 (9%)
Query: 329 KHRLGTGAYGTVYAGKLHN------DDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNL 382
K LG GA+G V+ + HN VA+K + + E +LL+ + H ++
Sbjct: 23 KWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHI 82
Query: 383 LRLLGCCIEEGEPIL-VYEFMPNGTLCQHLQR-----------ERGSGLPWXXXXXXXXX 430
+R G C EG P+L V+E+M +G L + L+ E + P
Sbjct: 83 VRFFGVCT-EGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVA 141
Query: 431 XXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSR-LGMTESSHISTAPQGT 489
++ A HRD+ + N L+ K+ DFG+SR + T+ +
Sbjct: 142 SQVAAGMVYLA-GLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLP 200
Query: 490 PGYLDPQYHQYFHLSDKSDVYSFGVVLIEIIT 521
++ P+ Y + +SDV+SFGVVL EI T
Sbjct: 201 IRWMPPESILYRKFTTESDVWSFGVVLWEIFT 232
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 99/216 (45%), Gaps = 30/216 (13%)
Query: 332 LGTGAYGTVYAGK---LHNDD-----WVAIKRFRYRDTDS-IDQVMNEIKLLSSV-SHPN 381
LG GA+G V + L D VA+K + T+ + +++E++++ + H N
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 84
Query: 382 LLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHS- 440
++ LLG C ++G ++ E+ G L ++LQ R GL + L S
Sbjct: 85 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 144
Query: 441 ----------AMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTP 490
+ HRD+ + N+L+ + K+ADFGL+R + HI + T
Sbjct: 145 AYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLAR----DIHHIDYYKKTTN 200
Query: 491 GYLDPQYHQYFHLSDK-----SDVYSFGVVLIEIIT 521
G L ++ L D+ SDV+SFGV+L EI T
Sbjct: 201 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 236
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 94/220 (42%), Gaps = 19/220 (8%)
Query: 332 LGTGAYGTVYAGKLHNDDWVAIKRFRYR---DTDSID-QVMNEIKLLSSVSHPNLLRLLG 387
LG G +G VY + ++ + ++ + ++ Q+ E+++ S + HPN+LRL G
Sbjct: 15 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 74
Query: 388 CCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIY 447
+ L+ E+ P GT+ + LQ + S Y HS +
Sbjct: 75 YFHDATRVYLILEYAPLGTVYRELQ--KLSKFDEQRTATYITELANALSYCHSKR---VI 129
Query: 448 HRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLSDKS 507
HRDIK N+LL K+ADFG S + S T GT YL P+ + +K
Sbjct: 130 HRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKV 186
Query: 508 DVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGR 547
D++S GV+ E + +P E N RI R
Sbjct: 187 DLWSLGVLCYEFLVG-------KPPFEANTYQETYKRISR 219
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 97/198 (48%), Gaps = 13/198 (6%)
Query: 332 LGTGAYGTVYAGKLH----NDDWVAIKRFR--YRDTDSIDQVMNEIKLLSSVSHPNLLRL 385
+G G +G V +G+L + VAIK + Y D D ++E ++ HPN++ L
Sbjct: 16 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRD-FLSEASIMGQFDHPNIIHL 74
Query: 386 LGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPP 445
G + +++ E+M NG+L L++ G YL S M+
Sbjct: 75 EGVVTKCKPVMIITEYMENGSLDAFLRKNDGR-FTVIQLVGMLRGIGSGMKYL-SDMS-- 130
Query: 446 IYHRDIKSSNILLDYNYRSKVADFGLSRL--GMTESSHISTAPQGTPGYLDPQYHQYFHL 503
HRD+ + NIL++ N KV+DFG+SR+ E+++ + + + P+ Y
Sbjct: 131 YVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKF 190
Query: 504 SDKSDVYSFGVVLIEIIT 521
+ SDV+S+G+V+ E+++
Sbjct: 191 TSASDVWSYGIVMWEVMS 208
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 99/204 (48%), Gaps = 17/204 (8%)
Query: 326 FSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYRDTDS---IDQVMNEIKLLSSVSHPN 381
F + ++G G YG VY + + VA+K+ R DT++ + EI LL ++HPN
Sbjct: 9 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL-DTETEGVPSTAIREISLLKELNHPN 67
Query: 382 LLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSA 441
+++LL E + LV+EF+ + L + + +G+P + HS
Sbjct: 68 IVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 126
Query: 442 MNPPIYHRDIKSSNILLDYNYRSKVADFGLSR-LGMTESSHISTAPQGTPGYLDPQYH-- 498
+ HRD+K N+L++ K+ADFGL+R G+ ++ T T Y P+
Sbjct: 127 R---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWYRAPEILLG 181
Query: 499 -QYFHLSDKSDVYSFGVVLIEIIT 521
+Y+ S D++S G + E++T
Sbjct: 182 CKYY--STAVDIWSLGCIFAEMVT 203
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 94/220 (42%), Gaps = 19/220 (8%)
Query: 332 LGTGAYGTVYAGKLHNDDWVAIKRFRYR---DTDSID-QVMNEIKLLSSVSHPNLLRLLG 387
LG G +G VY + ++ + ++ + ++ Q+ E+++ S + HPN+LRL G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 388 CCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIY 447
+ L+ E+ P GT+ + LQ + S Y HS +
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQ--KLSKFDEQRTATYITELANALSYCHSKR---VI 130
Query: 448 HRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLSDKS 507
HRDIK N+LL K+ADFG S + S A GT YL P+ + +K
Sbjct: 131 HRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRAALCGTLDYLPPEMIEGRMHDEKV 187
Query: 508 DVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGR 547
D++S GV+ E + +P E N RI R
Sbjct: 188 DLWSLGVLCYEFLVG-------KPPFEANTYQETYKRISR 220
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 91/211 (43%), Gaps = 19/211 (9%)
Query: 329 KHRLGTGAYGTVYAGKLHN------DDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNL 382
K LG GA+G V+ + HN VA+K + + E +LL+ + H ++
Sbjct: 17 KWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHI 76
Query: 383 LRLLGCCIEEGEPILVYEFMPNGTLCQHLQR-----------ERGSGLPWXXXXXXXXXX 431
+R G C E ++V+E+M +G L + L+ E + P
Sbjct: 77 VRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVAS 136
Query: 432 XXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSR-LGMTESSHISTAPQGTP 490
++ A HRD+ + N L+ K+ DFG+SR + T+ +
Sbjct: 137 QVAAGMVYLA-GLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPI 195
Query: 491 GYLDPQYHQYFHLSDKSDVYSFGVVLIEIIT 521
++ P+ Y + +SDV+SFGVVL EI T
Sbjct: 196 RWMPPESILYRKFTTESDVWSFGVVLWEIFT 226
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 93/212 (43%), Gaps = 21/212 (9%)
Query: 329 KHRLGTGAYGTVYAGKLHN------DDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNL 382
K LG GA+G V+ + HN VA+K + + E +LL+ + H ++
Sbjct: 46 KWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHI 105
Query: 383 LRLLGCCIEEGEPIL-VYEFMPNGTLCQHLQR-----------ERGSGLPWXXXXXXXXX 430
+R G C EG P+L V+E+M +G L + L+ E + P
Sbjct: 106 VRFFGVCT-EGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVA 164
Query: 431 XXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSR-LGMTESSHISTAPQGT 489
++ A HRD+ + N L+ K+ DFG+SR + T+ +
Sbjct: 165 SQVAAGMVYLA-GLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLP 223
Query: 490 PGYLDPQYHQYFHLSDKSDVYSFGVVLIEIIT 521
++ P+ Y + +SDV+SFGVVL EI T
Sbjct: 224 IRWMPPESILYRKFTTESDVWSFGVVLWEIFT 255
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 84/196 (42%), Gaps = 11/196 (5%)
Query: 332 LGTGAYGTVYAGKLHNDDWV----AIKRFRYRDTDSIDQVMNEIKLLSSVS-HPNLLRLL 386
+G G+Y V +L D + +K+ D + ID V E + S HP L+ L
Sbjct: 13 IGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLH 72
Query: 387 GCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPI 446
C E V E++ G L H+QR+R LP YLH I
Sbjct: 73 SCFQTESRLFFVIEYVNGGDLMFHMQRQRK--LPEEHARFYSAEISLALNYLHER---GI 127
Query: 447 YHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLSDK 506
+RD+K N+LLD K+ D+G+ + G+ S GTP Y+ P+ +
Sbjct: 128 IYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFC-GTPNYIAPEILRGEDYGFS 186
Query: 507 SDVYSFGVVLIEIITA 522
D ++ GV++ E++
Sbjct: 187 VDWWALGVLMFEMMAG 202
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 118/303 (38%), Gaps = 42/303 (13%)
Query: 332 LGTGAYGTVYAGKLHNDDWVAIKRFRYR---DTDSID-QVMNEIKLLSSVSHPNLLRLLG 387
LG G +G VY + ++ + ++ + ++ Q+ E+++ S + HPN+LRL G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 388 CCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIY 447
+ L+ E+ P G + + LQ + S Y HS +
Sbjct: 81 YFHDATRVYLILEYAPRGEVYKELQ--KLSKFDEQRTATYITELANALSYCHSKR---VI 135
Query: 448 HRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLSDKS 507
HRDIK N+LL K+ADFG S + S GT YL P+ + +K
Sbjct: 136 HRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRXXLXGTLDYLPPEMIEGRMHDEKV 192
Query: 508 DVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLEPHRDAWTL 567
D++S GV+ E + +P E N RI R D E RD
Sbjct: 193 DLWSLGVLCYEFLVG-------KPPFEANTYQETYKRISRVEFT-FPDFVTEGARD---- 240
Query: 568 SSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHIRVSSWASNIYMGSPAVSCCSLSECGS 627
L R L + RP + EV LEH W I S S C E S
Sbjct: 241 --------LISRLLKHNPSQRPMLREV---LEH----PW---ITANSSKPSNCQNKESAS 282
Query: 628 ERS 630
++S
Sbjct: 283 KQS 285
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 104/237 (43%), Gaps = 15/237 (6%)
Query: 328 EKHRLGTGAYGTVYAGKLH-----NDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNL 382
E LG+G +GTV G V I + D D+++ E ++ + +P +
Sbjct: 9 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 68
Query: 383 LRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAM 442
+R++G C E +LV E G L ++LQ+ R + YL +
Sbjct: 69 VRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRH--VKDKNIIELVHQVSMGMKYLEES- 124
Query: 443 NPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGT--PGYLDPQYHQY 500
HRD+ + N+LL + +K++DFGLS+ + ++ G + P+ Y
Sbjct: 125 --NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINY 182
Query: 501 FHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIG--RGCVDEIID 555
+ S KSDV+SFGV++ E + + SEV +R+G GC E+ D
Sbjct: 183 YKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREMYD 239
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 95/205 (46%), Gaps = 28/205 (13%)
Query: 332 LGTGAYGTVYAGKLHNDDWV----------AIKRFRYRDTDSID-QVMNEIKLLSSVSHP 380
LG+GA+GTVY G WV AIK + + M+E +++S+ HP
Sbjct: 23 LGSGAFGTVYKGI-----WVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHP 77
Query: 381 NLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRER---GSGLPWXXXXXXXXXXXXXXXY 437
+L+RLLG C+ LV + MP+G L +++ + GS L Y
Sbjct: 78 HLVRLLGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIGSQL----LLNWCVQIAKGMMY 132
Query: 438 LHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTP-GYLDPQ 496
L + HRD+ + N+L+ K+ DFGL+RL + + P ++ +
Sbjct: 133 LEERR---LVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALE 189
Query: 497 YHQYFHLSDKSDVYSFGVVLIEIIT 521
Y + +SDV+S+GV + E++T
Sbjct: 190 CIHYRKFTHQSDVWSYGVTIWELMT 214
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 98/204 (48%), Gaps = 17/204 (8%)
Query: 326 FSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYRDTDS---IDQVMNEIKLLSSVSHPN 381
F + ++G G YG VY + + VA+K+ R DT++ + EI LL ++HPN
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL-DTETEGVPSTAIREISLLKELNHPN 65
Query: 382 LLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSA 441
+++LL E + LV+EF+ + L + + +G+P + HS
Sbjct: 66 IVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 124
Query: 442 MNPPIYHRDIKSSNILLDYNYRSKVADFGLSR-LGMTESSHISTAPQGTPGYLDPQYH-- 498
+ HRD+K N+L++ K+ADFGL+R G+ ++ T Y P+
Sbjct: 125 R---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEV--VTLWYRAPEILLG 179
Query: 499 -QYFHLSDKSDVYSFGVVLIEIIT 521
+Y+ S D++S G + E++T
Sbjct: 180 CKYY--STAVDIWSLGCIFAEMVT 201
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 98/203 (48%), Gaps = 15/203 (7%)
Query: 326 FSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRY-RDTDSI-DQVMNEIKLLSSVSHPNL 382
F + ++G G YG VY + + VA+K+ R +T+ + + EI LL ++HPN+
Sbjct: 9 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 68
Query: 383 LRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAM 442
++LL E + LV+EF+ + L + + +G+P + HS
Sbjct: 69 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 127
Query: 443 NPPIYHRDIKSSNILLDYNYRSKVADFGLSR-LGMTESSHISTAPQGTPGYLDPQYH--- 498
+ HRD+K N+L++ K+ADFGL+R G+ ++ T Y P+
Sbjct: 128 ---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV--VTLWYRAPEILLGC 182
Query: 499 QYFHLSDKSDVYSFGVVLIEIIT 521
+Y+ S D++S G + E++T
Sbjct: 183 KYY--STAVDIWSLGCIFAEMVT 203
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 120/303 (39%), Gaps = 42/303 (13%)
Query: 332 LGTGAYGTVYAGKLHNDDWVAIKRFRYR---DTDSID-QVMNEIKLLSSVSHPNLLRLLG 387
LG G +G VY + ++ + ++ + ++ Q+ E+++ S + HPN+LRL G
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 77
Query: 388 CCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIY 447
+ L+ E+ P GT+ + LQ + S Y HS +
Sbjct: 78 YFHDATRVYLILEYAPLGTVYRELQ--KLSKFDEQRTATYITELANALSYCHSKR---VI 132
Query: 448 HRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLSDKS 507
HRDIK N+LL K+A+FG S + S T GT YL P+ + +K
Sbjct: 133 HRDIKPENLLLGSAGELKIANFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKV 189
Query: 508 DVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLEPHRDAWTL 567
D++S GV+ E + +P E N RI R D E RD
Sbjct: 190 DLWSLGVLCYEFLVG-------KPPFEANTYQETYKRISRVEFT-FPDFVTEGARD---- 237
Query: 568 SSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHIRVSSWASNIYMGSPAVSCCSLSECGS 627
L R L + RP + EV LEH W I S S C E S
Sbjct: 238 --------LISRLLKHNPSQRPMLREV---LEH----PW---ITANSSKPSNCQNKESAS 279
Query: 628 ERS 630
++S
Sbjct: 280 KQS 282
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 94/220 (42%), Gaps = 19/220 (8%)
Query: 332 LGTGAYGTVYAGKLHNDDWVAIKRFRYR---DTDSID-QVMNEIKLLSSVSHPNLLRLLG 387
LG G +G VY + ++ + ++ + ++ Q+ E+++ S + HPN+LRL G
Sbjct: 13 LGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 72
Query: 388 CCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIY 447
+ L+ E+ P GT+ + LQ + S Y HS +
Sbjct: 73 YFHDATRVYLILEYAPLGTVYRELQ--KLSKFDEQRTATYITELANALSYCHSKR---VI 127
Query: 448 HRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLSDKS 507
HRDIK N+LL K+ADFG S + S T GT YL P+ + +K
Sbjct: 128 HRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKV 184
Query: 508 DVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGR 547
D++S GV+ E + +P E N RI R
Sbjct: 185 DLWSLGVLCYEFLVG-------KPPFEANTYQETYKRISR 217
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 88/196 (44%), Gaps = 12/196 (6%)
Query: 332 LGTGAYGTVYAGKLHNDDWVAIKRFRYR---DTDSID-QVMNEIKLLSSVSHPNLLRLLG 387
LG G +G VY + ++ + ++ + ++ Q+ E+++ S + HPN+LRL G
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 388 CCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIY 447
+ L+ E+ P GT+ + LQ + S Y HS +
Sbjct: 80 YFHDATRVYLILEYAPLGTVYRELQ--KLSRFDEQRTATYITELANALSYCHSKR---VI 134
Query: 448 HRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLSDKS 507
HRDIK N+LL N K+ADFG S + S GT YL P+ + +K
Sbjct: 135 HRDIKPENLLLGSNGELKIADFGWS---VHAPSSRRDTLCGTLDYLPPEMIEGRMHDEKV 191
Query: 508 DVYSFGVVLIEIITAL 523
D++S GV+ E + +
Sbjct: 192 DLWSLGVLCYEFLVGM 207
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 96/203 (47%), Gaps = 16/203 (7%)
Query: 332 LGTGAYGTVYAGK-LHNDDWVAIKRFRYRD-TDSIDQVMNEIKLLSSVSHPNLLRLLGCC 389
+G+GA V A + VAIKR S+D+++ EI+ +S HPN++
Sbjct: 23 IGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSF 82
Query: 390 IEEGEPILVYEFMPNGT---LCQHL--QRERGSG-LPWXXXXXXXXXXXXXXXYLHSAMN 443
+ + E LV + + G+ + +H+ + E SG L YLH N
Sbjct: 83 VVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHK--N 140
Query: 444 PPIYHRDIKSSNILLDYNYRSKVADFGLSRL----GMTESSHISTAPQGTPGYLDPQYHQ 499
I HRD+K+ NILL + ++ADFG+S G + + GTP ++ P+ +
Sbjct: 141 GQI-HRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVME 199
Query: 500 YFHLSD-KSDVYSFGVVLIEIIT 521
D K+D++SFG+ IE+ T
Sbjct: 200 QVRGYDFKADIWSFGITAIELAT 222
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 98/204 (48%), Gaps = 17/204 (8%)
Query: 326 FSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYRDTDS---IDQVMNEIKLLSSVSHPN 381
F + ++G G YG VY + + VA+K+ R DT++ + EI LL ++HPN
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL-DTETEGVPSTAIREISLLKELNHPN 65
Query: 382 LLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSA 441
+++LL E + LV+EF+ + L + + +G+P + HS
Sbjct: 66 IVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 124
Query: 442 MNPPIYHRDIKSSNILLDYNYRSKVADFGLSR-LGMTESSHISTAPQGTPGYLDPQYH-- 498
+ HRD+K N+L++ K+ADFGL+R G+ ++ T Y P+
Sbjct: 125 R---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV--VTLWYRAPEILLG 179
Query: 499 -QYFHLSDKSDVYSFGVVLIEIIT 521
+Y+ S D++S G + E++T
Sbjct: 180 CKYY--STAVDIWSLGCIFAEMVT 201
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 98/204 (48%), Gaps = 17/204 (8%)
Query: 326 FSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYRDTDS---IDQVMNEIKLLSSVSHPN 381
F + ++G G YG VY + + VA+K+ R DT++ + EI LL ++HPN
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL-DTETEGVPSTAIREISLLKELNHPN 66
Query: 382 LLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSA 441
+++LL E + LV+EF+ + L + + +G+P + HS
Sbjct: 67 IVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 125
Query: 442 MNPPIYHRDIKSSNILLDYNYRSKVADFGLSR-LGMTESSHISTAPQGTPGYLDPQYH-- 498
+ HRD+K N+L++ K+ADFGL+R G+ ++ T Y P+
Sbjct: 126 R---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV--VTLWYRAPEILLG 180
Query: 499 -QYFHLSDKSDVYSFGVVLIEIIT 521
+Y+ S D++S G + E++T
Sbjct: 181 CKYY--STAVDIWSLGCIFAEMVT 202
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 98/204 (48%), Gaps = 17/204 (8%)
Query: 326 FSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYRDTDS---IDQVMNEIKLLSSVSHPN 381
F + ++G G YG VY + + VA+K+ R DT++ + EI LL ++HPN
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL-DTETEGVPSTAIREISLLKELNHPN 65
Query: 382 LLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSA 441
+++LL E + LV+EF+ + L + + +G+P + HS
Sbjct: 66 IVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 124
Query: 442 MNPPIYHRDIKSSNILLDYNYRSKVADFGLSR-LGMTESSHISTAPQGTPGYLDPQYH-- 498
+ HRD+K N+L++ K+ADFGL+R G+ ++ T Y P+
Sbjct: 125 R---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV--VTLWYRAPEILLG 179
Query: 499 -QYFHLSDKSDVYSFGVVLIEIIT 521
+Y+ S D++S G + E++T
Sbjct: 180 CKYY--STAVDIWSLGCIFAEMVT 201
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 98/204 (48%), Gaps = 17/204 (8%)
Query: 326 FSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYRDTDS---IDQVMNEIKLLSSVSHPN 381
F + ++G G YG VY + + VA+K+ R DT++ + EI LL ++HPN
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL-DTETEGVPSTAIREISLLKELNHPN 66
Query: 382 LLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSA 441
+++LL E + LV+EF+ + L + + +G+P + HS
Sbjct: 67 IVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 125
Query: 442 MNPPIYHRDIKSSNILLDYNYRSKVADFGLSR-LGMTESSHISTAPQGTPGYLDPQYH-- 498
+ HRD+K N+L++ K+ADFGL+R G+ ++ T Y P+
Sbjct: 126 R---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV--VTLWYRAPEILLG 180
Query: 499 -QYFHLSDKSDVYSFGVVLIEIIT 521
+Y+ S D++S G + E++T
Sbjct: 181 CKYY--STAVDIWSLGCIFAEMVT 202
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 98/204 (48%), Gaps = 17/204 (8%)
Query: 326 FSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYRDTDS---IDQVMNEIKLLSSVSHPN 381
F + ++G G YG VY + + VA+K+ R DT++ + EI LL ++HPN
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL-DTETEGVPSTAIREISLLKELNHPN 62
Query: 382 LLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSA 441
+++LL E + LV+EF+ + L + + +G+P + HS
Sbjct: 63 IVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 442 MNPPIYHRDIKSSNILLDYNYRSKVADFGLSR-LGMTESSHISTAPQGTPGYLDPQYH-- 498
+ HRD+K N+L++ K+ADFGL+R G+ ++ T Y P+
Sbjct: 122 R---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV--VTLWYRAPEILLG 176
Query: 499 -QYFHLSDKSDVYSFGVVLIEIIT 521
+Y+ S D++S G + E++T
Sbjct: 177 CKYY--STAVDIWSLGCIFAEMVT 198
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 101/210 (48%), Gaps = 20/210 (9%)
Query: 332 LGTGAYGTVY---AGKLHNDDWV---AIKRFR-YRDTDSIDQVMNEIKLLSSV-SHPNLL 383
LG GA+G V A L +D V A+K + D + +M+E+K++S + H N++
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 384 RLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXX-XXXXXXXXXXXXYLHSA- 441
LLG C G +++ E+ G L L+R+R GL + LH +
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHFSS 173
Query: 442 ---------MNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTP-G 491
+ HRD+ + N+LL + +K+ DFGL+R M +S++I P
Sbjct: 174 QVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVK 233
Query: 492 YLDPQYHQYFHLSDKSDVYSFGVVLIEIIT 521
++ P+ + +SDV+S+G++L EI +
Sbjct: 234 WMAPESIFDCVYTVQSDVWSYGILLWEIFS 263
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 98/203 (48%), Gaps = 15/203 (7%)
Query: 326 FSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRY-RDTDSI-DQVMNEIKLLSSVSHPNL 382
F + ++G G YG VY + + VA+K+ R +T+ + + EI LL ++HPN+
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 383 LRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAM 442
++LL E + LV+EF+ + L + + +G+P + HS
Sbjct: 66 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 124
Query: 443 NPPIYHRDIKSSNILLDYNYRSKVADFGLSR-LGMTESSHISTAPQGTPGYLDPQYH--- 498
+ HRD+K N+L++ K+ADFGL+R G+ ++ T Y P+
Sbjct: 125 ---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEV--VTLWYRAPEILLGC 179
Query: 499 QYFHLSDKSDVYSFGVVLIEIIT 521
+Y+ S D++S G + E++T
Sbjct: 180 KYY--STAVDIWSLGCIFAEMVT 200
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 102/224 (45%), Gaps = 17/224 (7%)
Query: 307 GNSSVPFYPYKEIEKATSFFSEKHRLGTGAYGTVYAGKLHNDDW-----VAIKRFRYRDT 361
G+ P I K T F K LG+GA+GTVY G + VAIK R +
Sbjct: 1 GSGEAPNQALLRILKETEFKKIK-VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS 59
Query: 362 DSID-QVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLP 420
+ ++++E +++SV +P++ RLLG C+ L+ + MP G L ++ RE +
Sbjct: 60 PKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYV-REHKDNIG 117
Query: 421 WXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESS 480
YL + HRD+ + N+L+ K+ DFGL++L E
Sbjct: 118 SQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK 174
Query: 481 HISTAPQGTP---GYLDPQYHQYFHLSDKSDVYSFGVVLIEIIT 521
P L+ H+ + + +SDV+S+GV + E++T
Sbjct: 175 EYHAEGGKVPIKWMALESILHRIY--THQSDVWSYGVTVWELMT 216
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 98/204 (48%), Gaps = 17/204 (8%)
Query: 326 FSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYRDTDS---IDQVMNEIKLLSSVSHPN 381
F + ++G G YG VY + + VA+K+ R DT++ + EI LL ++HPN
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL-DTETEGVPSTAIREISLLKELNHPN 63
Query: 382 LLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSA 441
+++LL E + LV+EF+ + L + + +G+P + HS
Sbjct: 64 IVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 442 MNPPIYHRDIKSSNILLDYNYRSKVADFGLSR-LGMTESSHISTAPQGTPGYLDPQYH-- 498
+ HRD+K N+L++ K+ADFGL+R G+ ++ T Y P+
Sbjct: 123 R---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV--VTLWYRAPEILLG 177
Query: 499 -QYFHLSDKSDVYSFGVVLIEIIT 521
+Y+ S D++S G + E++T
Sbjct: 178 CKYY--STAVDIWSLGCIFAEMVT 199
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 104/237 (43%), Gaps = 15/237 (6%)
Query: 328 EKHRLGTGAYGTVYAGKLH-----NDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNL 382
E LG+G +GTV G V I + D D+++ E ++ + +P +
Sbjct: 15 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 74
Query: 383 LRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAM 442
+R++G C E +LV E G L ++LQ+ R + YL +
Sbjct: 75 VRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRH--VKDKNIIELVHQVSMGMKYLEES- 130
Query: 443 NPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGT--PGYLDPQYHQY 500
HRD+ + N+LL + +K++DFGLS+ + ++ G + P+ Y
Sbjct: 131 --NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINY 188
Query: 501 FHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIG--RGCVDEIID 555
+ S KSDV+SFGV++ E + + SEV +R+G GC E+ D
Sbjct: 189 YKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREMYD 245
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 84/196 (42%), Gaps = 11/196 (5%)
Query: 332 LGTGAYGTVYAGKLHNDDWV----AIKRFRYRDTDSIDQVMNEIKLLSSVS-HPNLLRLL 386
+G G+Y V +L D + +K+ D + ID V E + S HP L+ L
Sbjct: 17 IGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLH 76
Query: 387 GCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPI 446
C E V E++ G L H+QR+R LP YLH I
Sbjct: 77 SCFQTESRLFFVIEYVNGGDLMFHMQRQRK--LPEEHARFYSAEISLALNYLHER---GI 131
Query: 447 YHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLSDK 506
+RD+K N+LLD K+ D+G+ + G+ S GTP Y+ P+ +
Sbjct: 132 IYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFC-GTPNYIAPEILRGEDYGFS 190
Query: 507 SDVYSFGVVLIEIITA 522
D ++ GV++ E++
Sbjct: 191 VDWWALGVLMFEMMAG 206
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 99/216 (45%), Gaps = 30/216 (13%)
Query: 332 LGTGAYGTVYAGK---LHNDD-----WVAIKRFRYRDTDS-IDQVMNEIKLLSSV-SHPN 381
LG GA+G V + L D VA+K + T+ + +++E++++ + H N
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 80
Query: 382 LLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHS- 440
++ LLG C ++G ++ E+ G L ++LQ R GL + L S
Sbjct: 81 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 140
Query: 441 ----------AMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTP 490
+ HRD+ + N+L+ + K+ADFGL+R + HI + T
Sbjct: 141 AYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLAR----DIHHIDYYKKTTN 196
Query: 491 GYLDPQYHQYFHLSDK-----SDVYSFGVVLIEIIT 521
G L ++ L D+ SDV+SFGV+L EI T
Sbjct: 197 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 232
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 98/203 (48%), Gaps = 15/203 (7%)
Query: 326 FSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRY-RDTDSI-DQVMNEIKLLSSVSHPNL 382
F + ++G G YG VY + + VA+K+ R +T+ + + EI LL ++HPN+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 383 LRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAM 442
++LL E + LV+EF+ + L + + +G+P + HS
Sbjct: 65 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 123
Query: 443 NPPIYHRDIKSSNILLDYNYRSKVADFGLSR-LGMTESSHISTAPQGTPGYLDPQYH--- 498
+ HRD+K N+L++ K+ADFGL+R G+ ++ T Y P+
Sbjct: 124 ---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV--VTLWYRAPEILLGC 178
Query: 499 QYFHLSDKSDVYSFGVVLIEIIT 521
+Y+ S D++S G + E++T
Sbjct: 179 KYY--STAVDIWSLGCIFAEMVT 199
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 98/204 (48%), Gaps = 17/204 (8%)
Query: 326 FSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYRDTDS---IDQVMNEIKLLSSVSHPN 381
F + ++G G YG VY + + VA+K+ R DT++ + EI LL ++HPN
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL-DTETEGVPSTAIREISLLKELNHPN 63
Query: 382 LLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSA 441
+++LL E + LV+EF+ + L + + +G+P + HS
Sbjct: 64 IVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 442 MNPPIYHRDIKSSNILLDYNYRSKVADFGLSR-LGMTESSHISTAPQGTPGYLDPQYH-- 498
+ HRD+K N+L++ K+ADFGL+R G+ ++ T Y P+
Sbjct: 123 R---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV--VTLWYRAPEILLG 177
Query: 499 -QYFHLSDKSDVYSFGVVLIEIIT 521
+Y+ S D++S G + E++T
Sbjct: 178 CKYY--STAVDIWSLGCIFAEMVT 199
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 96/203 (47%), Gaps = 16/203 (7%)
Query: 332 LGTGAYGTVYAGK-LHNDDWVAIKRFRYRD-TDSIDQVMNEIKLLSSVSHPNLLRLLGCC 389
+G+GA V A + VAIKR S+D+++ EI+ +S HPN++
Sbjct: 18 IGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSF 77
Query: 390 IEEGEPILVYEFMPNGT---LCQHL--QRERGSG-LPWXXXXXXXXXXXXXXXYLHSAMN 443
+ + E LV + + G+ + +H+ + E SG L YLH N
Sbjct: 78 VVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHK--N 135
Query: 444 PPIYHRDIKSSNILLDYNYRSKVADFGLSRL----GMTESSHISTAPQGTPGYLDPQYHQ 499
I HRD+K+ NILL + ++ADFG+S G + + GTP ++ P+ +
Sbjct: 136 GQI-HRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVME 194
Query: 500 YFHLSD-KSDVYSFGVVLIEIIT 521
D K+D++SFG+ IE+ T
Sbjct: 195 QVRGYDFKADIWSFGITAIELAT 217
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 98/203 (48%), Gaps = 15/203 (7%)
Query: 326 FSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRY-RDTDSI-DQVMNEIKLLSSVSHPNL 382
F + ++G G YG VY + + VA+K+ R +T+ + + EI LL ++HPN+
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 383 LRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAM 442
++LL E + LV+EF+ + L + + +G+P + HS
Sbjct: 66 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 124
Query: 443 NPPIYHRDIKSSNILLDYNYRSKVADFGLSR-LGMTESSHISTAPQGTPGYLDPQYH--- 498
+ HRD+K N+L++ K+ADFGL+R G+ ++ T Y P+
Sbjct: 125 ---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV--VTLWYRAPEILLGC 179
Query: 499 QYFHLSDKSDVYSFGVVLIEIIT 521
+Y+ S D++S G + E++T
Sbjct: 180 KYY--STAVDIWSLGCIFAEMVT 200
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 98/204 (48%), Gaps = 17/204 (8%)
Query: 326 FSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYRDTDS---IDQVMNEIKLLSSVSHPN 381
F + ++G G YG VY + + VA+K+ R DT++ + EI LL ++HPN
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL-DTETEGVPSTAIREISLLKELNHPN 64
Query: 382 LLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSA 441
+++LL E + LV+EF+ + L + + +G+P + HS
Sbjct: 65 IVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 123
Query: 442 MNPPIYHRDIKSSNILLDYNYRSKVADFGLSR-LGMTESSHISTAPQGTPGYLDPQYH-- 498
+ HRD+K N+L++ K+ADFGL+R G+ ++ T Y P+
Sbjct: 124 R---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV--VTLWYRAPEILLG 178
Query: 499 -QYFHLSDKSDVYSFGVVLIEIIT 521
+Y+ S D++S G + E++T
Sbjct: 179 CKYY--STAVDIWSLGCIFAEMVT 200
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 121/307 (39%), Gaps = 50/307 (16%)
Query: 332 LGTGAYGTVYAGKLHNDDWVAIKRFRYR---DTDSID-QVMNEIKLLSSVSHPNLLRLLG 387
LG G +G VY + ++ + ++ + ++ Q+ E+++ S + HPN+LRL G
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 101
Query: 388 CCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIY 447
+ L+ E+ P GT+ + LQ + S Y HS +
Sbjct: 102 YFHDATRVYLILEYAPLGTVYRELQ--KLSKFDEQRTATYITELANALSYCHSKR---VI 156
Query: 448 HRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQ----GTPGYLDPQYHQYFHL 503
HRDIK N+LL K+ADFG S H ++ + GT YL P+ +
Sbjct: 157 HRDIKPENLLLGSAGELKIADFGW-------SVHAPSSRRDDLCGTLDYLPPEMIEGRMH 209
Query: 504 SDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLEPHRD 563
+K D++S GV+ E + +P E N RI R D E RD
Sbjct: 210 DEKVDLWSLGVLCYEFLVG-------KPPFEANTYQETYKRISRVEFT-FPDFVTEGARD 261
Query: 564 AWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHIRVSSWASNIYMGSPAVSCCSLS 623
L R L + RP + EV LEH W I S S C
Sbjct: 262 ------------LISRLLKHNPSQRPMLREV---LEH----PW---ITANSSKPSNCQNK 299
Query: 624 ECGSERS 630
E S++S
Sbjct: 300 ESASKQS 306
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 98/204 (48%), Gaps = 17/204 (8%)
Query: 326 FSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYRDTDS---IDQVMNEIKLLSSVSHPN 381
F + ++G G YG VY + + VA+K+ R DT++ + EI LL ++HPN
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL-DTETEGVPSTAIREISLLKELNHPN 64
Query: 382 LLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSA 441
+++LL E + LV+EF+ + L + + +G+P + HS
Sbjct: 65 IVKLLDVIHTENKLYLVFEFL-SMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 123
Query: 442 MNPPIYHRDIKSSNILLDYNYRSKVADFGLSR-LGMTESSHISTAPQGTPGYLDPQYH-- 498
+ HRD+K N+L++ K+ADFGL+R G+ ++ T Y P+
Sbjct: 124 R---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEV--VTLWYRAPEILLG 178
Query: 499 -QYFHLSDKSDVYSFGVVLIEIIT 521
+Y+ S D++S G + E++T
Sbjct: 179 CKYY--STAVDIWSLGCIFAEMVT 200
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 98/204 (48%), Gaps = 17/204 (8%)
Query: 326 FSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYRDTDS---IDQVMNEIKLLSSVSHPN 381
F + ++G G YG VY + + VA+K+ R DT++ + EI LL ++HPN
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL-DTETEGVPSTAIREISLLKELNHPN 62
Query: 382 LLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSA 441
+++LL E + LV+EF+ + L + + +G+P + HS
Sbjct: 63 IVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 442 MNPPIYHRDIKSSNILLDYNYRSKVADFGLSR-LGMTESSHISTAPQGTPGYLDPQYH-- 498
+ HRD+K N+L++ K+ADFGL+R G+ ++ T Y P+
Sbjct: 122 R---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV--VTLWYRAPEILLG 176
Query: 499 -QYFHLSDKSDVYSFGVVLIEIIT 521
+Y+ S D++S G + E++T
Sbjct: 177 CKYY--STAVDIWSLGCIFAEMVT 198
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 98/203 (48%), Gaps = 15/203 (7%)
Query: 326 FSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRY-RDTDSI-DQVMNEIKLLSSVSHPNL 382
F + ++G G YG VY + + VA+K+ R +T+ + + EI LL ++HPN+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 383 LRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAM 442
++LL E + LV+EF+ + L + + +G+P + HS
Sbjct: 65 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 123
Query: 443 NPPIYHRDIKSSNILLDYNYRSKVADFGLSR-LGMTESSHISTAPQGTPGYLDPQYH--- 498
+ HRD+K N+L++ K+ADFGL+R G+ ++ T Y P+
Sbjct: 124 ---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV--VTLWYRAPEILLGC 178
Query: 499 QYFHLSDKSDVYSFGVVLIEIIT 521
+Y+ S D++S G + E++T
Sbjct: 179 KYY--STAVDIWSLGCIFAEMVT 199
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 98/204 (48%), Gaps = 17/204 (8%)
Query: 326 FSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYRDTDS---IDQVMNEIKLLSSVSHPN 381
F + ++G G YG VY + + VA+K+ R DT++ + EI LL ++HPN
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL-DTETEGVPSTAIREISLLKELNHPN 66
Query: 382 LLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSA 441
+++LL E + LV+EF+ + L + + +G+P + HS
Sbjct: 67 IVKLLDVIHTENKLYLVFEFL-SMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 125
Query: 442 MNPPIYHRDIKSSNILLDYNYRSKVADFGLSR-LGMTESSHISTAPQGTPGYLDPQYH-- 498
+ HRD+K N+L++ K+ADFGL+R G+ ++ T Y P+
Sbjct: 126 R---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEV--VTLWYRAPEILLG 180
Query: 499 -QYFHLSDKSDVYSFGVVLIEIIT 521
+Y+ S D++S G + E++T
Sbjct: 181 CKYY--STAVDIWSLGCIFAEMVT 202
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 104/237 (43%), Gaps = 15/237 (6%)
Query: 328 EKHRLGTGAYGTVYAGKLH-----NDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNL 382
E LG+G +GTV G V I + D D+++ E ++ + +P +
Sbjct: 21 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 80
Query: 383 LRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAM 442
+R++G C E +LV E G L ++LQ+ R + YL +
Sbjct: 81 VRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRH--VKDKNIIELVHQVSMGMKYLEES- 136
Query: 443 NPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGT--PGYLDPQYHQY 500
HRD+ + N+LL + +K++DFGLS+ + ++ G + P+ Y
Sbjct: 137 --NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINY 194
Query: 501 FHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIG--RGCVDEIID 555
+ S KSDV+SFGV++ E + + SEV +R+G GC E+ D
Sbjct: 195 YKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREMYD 251
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 90/196 (45%), Gaps = 8/196 (4%)
Query: 326 FSEKHRLGTGAYGTVY-AGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLR 384
++ ++G GA GTVY A + VAI++ + + ++NEI ++ +PN++
Sbjct: 23 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVN 82
Query: 385 LLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNP 444
L + E +V E++ G+L + + + +LHS
Sbjct: 83 YLDSYLVGDELWVVMEYLAGGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLHSNQ-- 137
Query: 445 PIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLS 504
+ HR+IKS NILL + K+ DFG E S ST GTP ++ P+
Sbjct: 138 -VIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTM-VGTPYWMAPEVVTRKAYG 195
Query: 505 DKSDVYSFGVVLIEII 520
K D++S G++ IE+I
Sbjct: 196 PKVDIWSLGIMAIEMI 211
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 104/237 (43%), Gaps = 15/237 (6%)
Query: 328 EKHRLGTGAYGTVYAGKLH-----NDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNL 382
E LG+G +GTV G V I + D D+++ E ++ + +P +
Sbjct: 11 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 70
Query: 383 LRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAM 442
+R++G C E +LV E G L ++LQ+ R + YL +
Sbjct: 71 VRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRH--VKDKNIIELVHQVSMGMKYLEES- 126
Query: 443 NPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGT--PGYLDPQYHQY 500
HRD+ + N+LL + +K++DFGLS+ + ++ G + P+ Y
Sbjct: 127 --NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINY 184
Query: 501 FHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIG--RGCVDEIID 555
+ S KSDV+SFGV++ E + + SEV +R+G GC E+ D
Sbjct: 185 YKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREMYD 241
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 89/196 (45%), Gaps = 8/196 (4%)
Query: 326 FSEKHRLGTGAYGTVY-AGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLR 384
++ ++G GA GTVY A + VAI++ + + ++NEI ++ +PN++
Sbjct: 23 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVN 82
Query: 385 LLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNP 444
L + E +V E++ G+L + + + +LHS
Sbjct: 83 YLDSYLVGDELWVVMEYLAGGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLHSNQ-- 137
Query: 445 PIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLS 504
+ HRDIKS NILL + K+ DFG E S S GTP ++ P+
Sbjct: 138 -VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXM-VGTPYWMAPEVVTRKAYG 195
Query: 505 DKSDVYSFGVVLIEII 520
K D++S G++ IE+I
Sbjct: 196 PKVDIWSLGIMAIEMI 211
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 89/196 (45%), Gaps = 8/196 (4%)
Query: 326 FSEKHRLGTGAYGTVY-AGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLR 384
++ ++G GA GTVY A + VAI++ + + ++NEI ++ +PN++
Sbjct: 22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVN 81
Query: 385 LLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNP 444
L + E +V E++ G+L + + + +LHS
Sbjct: 82 YLDSYLVGDELWVVMEYLAGGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLHSNQ-- 136
Query: 445 PIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLS 504
+ HRDIKS NILL + K+ DFG E S S GTP ++ P+
Sbjct: 137 -VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXM-VGTPYWMAPEVVTRKAYG 194
Query: 505 DKSDVYSFGVVLIEII 520
K D++S G++ IE+I
Sbjct: 195 PKVDIWSLGIMAIEMI 210
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 102/224 (45%), Gaps = 17/224 (7%)
Query: 307 GNSSVPFYPYKEIEKATSFFSEKHRLGTGAYGTVYAGKLHNDDW-----VAIKRFRYRDT 361
G+ P I K T F K LG+GA+GTVY G + VAIK R +
Sbjct: 1 GSGEAPNQALLRILKETEFKKIK-VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS 59
Query: 362 DSID-QVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLP 420
+ ++++E +++SV +P++ RLLG C+ L+ + MP G L ++ RE +
Sbjct: 60 PKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYV-REHKDNIG 117
Query: 421 WXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESS 480
YL + HRD+ + N+L+ K+ DFGL++L E
Sbjct: 118 SQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK 174
Query: 481 HISTAPQGTP---GYLDPQYHQYFHLSDKSDVYSFGVVLIEIIT 521
P L+ H+ + + +SDV+S+GV + E++T
Sbjct: 175 EYHAEGGKVPIKWMALESILHRIY--THQSDVWSYGVTVWELMT 216
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 104/237 (43%), Gaps = 15/237 (6%)
Query: 328 EKHRLGTGAYGTVYAGKLH-----NDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNL 382
E LG+G +GTV G V I + D D+++ E ++ + +P +
Sbjct: 29 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 88
Query: 383 LRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAM 442
+R++G C E +LV E G L ++LQ+ R + YL +
Sbjct: 89 VRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRH--VKDKNIIELVHQVSMGMKYLEES- 144
Query: 443 NPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGT--PGYLDPQYHQY 500
HRD+ + N+LL + +K++DFGLS+ + ++ G + P+ Y
Sbjct: 145 --NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINY 202
Query: 501 FHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIG--RGCVDEIID 555
+ S KSDV+SFGV++ E + + SEV +R+G GC E+ D
Sbjct: 203 YKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREMYD 259
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 99/216 (45%), Gaps = 30/216 (13%)
Query: 332 LGTGAYGTVYAGK---LHNDD-----WVAIKRFRYRDTDS-IDQVMNEIKLLSSV-SHPN 381
LG GA+G V + L D VA+K + T+ + +++E++++ + H N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 382 LLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHS- 440
++ LLG C ++G ++ E+ G L ++LQ R GL + L S
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 155
Query: 441 ----------AMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTP 490
+ HRD+ + N+L+ + K+ADFGL+R + HI + T
Sbjct: 156 AYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLAR----DIHHIDYYKKTTN 211
Query: 491 GYLDPQYHQYFHLSDK-----SDVYSFGVVLIEIIT 521
G L ++ L D+ SDV+SFGV+L EI T
Sbjct: 212 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 119/303 (39%), Gaps = 42/303 (13%)
Query: 332 LGTGAYGTVYAGKLHNDDWVAIKRFRYR---DTDSID-QVMNEIKLLSSVSHPNLLRLLG 387
LG G +G VY + ++ + ++ + ++ Q+ E+++ S + HPN+LRL G
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 77
Query: 388 CCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIY 447
+ L+ E+ P GT+ + LQ + S Y HS +
Sbjct: 78 YFHDATRVYLILEYAPLGTVYRELQ--KLSKFDEQRTATYITELANALSYCHSKR---VI 132
Query: 448 HRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLSDKS 507
HRDIK N+LL K+ADFG S + S GT YL P+ + +K
Sbjct: 133 HRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRXXLCGTLDYLPPEMIEGRMHDEKV 189
Query: 508 DVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLEPHRDAWTL 567
D++S GV+ E + +P E N RI R D E RD
Sbjct: 190 DLWSLGVLCYEFLVG-------KPPFEANTYQETYKRISRVEFT-FPDFVTEGARD---- 237
Query: 568 SSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHIRVSSWASNIYMGSPAVSCCSLSECGS 627
L R L + RP + EV LEH W I S S C E S
Sbjct: 238 --------LISRLLKHNPSQRPMLREV---LEH----PW---ITANSSKPSNCQNKESAS 279
Query: 628 ERS 630
++S
Sbjct: 280 KQS 282
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 89/196 (45%), Gaps = 8/196 (4%)
Query: 326 FSEKHRLGTGAYGTVY-AGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLR 384
++ ++G GA GTVY A + VAI++ + + ++NEI ++ +PN++
Sbjct: 22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVN 81
Query: 385 LLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNP 444
L + E +V E++ G+L + + + +LHS
Sbjct: 82 YLDSYLVGDELWVVMEYLAGGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLHSNQ-- 136
Query: 445 PIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLS 504
+ HRDIKS NILL + K+ DFG E S S GTP ++ P+
Sbjct: 137 -VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEM-VGTPYWMAPEVVTRKAYG 194
Query: 505 DKSDVYSFGVVLIEII 520
K D++S G++ IE+I
Sbjct: 195 PKVDIWSLGIMAIEMI 210
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 93/220 (42%), Gaps = 19/220 (8%)
Query: 332 LGTGAYGTVYAGKLHNDDWVAIKRFRYR---DTDSID-QVMNEIKLLSSVSHPNLLRLLG 387
LG G +G VY + ++ + ++ + ++ Q+ E+++ S + HPN+LRL G
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 388 CCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIY 447
+ L+ E+ P GT+ + LQ + S Y HS +
Sbjct: 77 YFHDATRVYLILEYAPLGTVYRELQ--KLSKFDEQRTATYITELANALSYCHSKR---VI 131
Query: 448 HRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLSDKS 507
HRDIK N+LL K+ADFG S + S GT YL P+ + +K
Sbjct: 132 HRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRDTLCGTLDYLPPEMIEGRMHDEKV 188
Query: 508 DVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGR 547
D++S GV+ E + +P E N RI R
Sbjct: 189 DLWSLGVLCYEFLVG-------KPPFEANTYQETYKRISR 221
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 104/237 (43%), Gaps = 15/237 (6%)
Query: 328 EKHRLGTGAYGTVYAGKLH-----NDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNL 382
E LG+G +GTV G V I + D D+++ E ++ + +P +
Sbjct: 31 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 90
Query: 383 LRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAM 442
+R++G C E +LV E G L ++LQ+ R + YL +
Sbjct: 91 VRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRH--VKDKNIIELVHQVSMGMKYLEES- 146
Query: 443 NPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGT--PGYLDPQYHQY 500
HRD+ + N+LL + +K++DFGLS+ + ++ G + P+ Y
Sbjct: 147 --NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINY 204
Query: 501 FHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIG--RGCVDEIID 555
+ S KSDV+SFGV++ E + + SEV +R+G GC E+ D
Sbjct: 205 YKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREMYD 261
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 104/237 (43%), Gaps = 15/237 (6%)
Query: 328 EKHRLGTGAYGTVYAGKLH-----NDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNL 382
E LG+G +GTV G V I + D D+++ E ++ + +P +
Sbjct: 31 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 90
Query: 383 LRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAM 442
+R++G C E +LV E G L ++LQ+ R + YL +
Sbjct: 91 VRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRH--VKDKNIIELVHQVSMGMKYLEES- 146
Query: 443 NPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGT--PGYLDPQYHQY 500
HRD+ + N+LL + +K++DFGLS+ + ++ G + P+ Y
Sbjct: 147 --NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINY 204
Query: 501 FHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIG--RGCVDEIID 555
+ S KSDV+SFGV++ E + + SEV +R+G GC E+ D
Sbjct: 205 YKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREMYD 261
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 96/205 (46%), Gaps = 16/205 (7%)
Query: 326 FSEKHRLGTGAYGTVYAGKLHNDDW-----VAIKRFRYRDTDSID-QVMNEIKLLSSVSH 379
F + LG+GA+GTVY G + VAIK R + + ++++E +++SV +
Sbjct: 18 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 77
Query: 380 PNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLH 439
P++ RLLG C+ L+ + MP G L ++ RE + YL
Sbjct: 78 PHVCRLLGICLTSTVQ-LIMQLMPFGXLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYLE 135
Query: 440 SAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTP---GYLDPQ 496
+ HRD+ + N+L+ K+ DFGL++L E P L+
Sbjct: 136 DRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 192
Query: 497 YHQYFHLSDKSDVYSFGVVLIEIIT 521
H+ + + +SDV+S+GV + E++T
Sbjct: 193 LHRIY--THQSDVWSYGVTVWELMT 215
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 98/207 (47%), Gaps = 20/207 (9%)
Query: 332 LGTGAYGTVY---AGKLHNDDWV---AIKRFR-YRDTDSIDQVMNEIKLLSSV-SHPNLL 383
LG GA+G V A L +D V A+K + D + +M+E+K++S + H N++
Sbjct: 46 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 105
Query: 384 RLLGCCIEEGEPILVYEFMPNGTLCQHLQR--------ERGSGLPWXXXXXXXXXXXXXX 435
LLG C G +++ E+ G L L+R E G L
Sbjct: 106 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGM 165
Query: 436 XYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTP-GYLD 494
+L S HRD+ + N+LL + +K+ DFGL+R M +S++I P ++
Sbjct: 166 AFLASK---NCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMA 222
Query: 495 PQYHQYFHLSDKSDVYSFGVVLIEIIT 521
P+ + +SDV+S+G++L EI +
Sbjct: 223 PESIFDCVYTVQSDVWSYGILLWEIFS 249
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 95/216 (43%), Gaps = 13/216 (6%)
Query: 332 LGTGAYGTVYAGKLHNDDWVAIKRFRYR---DTDSID-QVMNEIKLLSSVSHPNLLRLLG 387
LG G +G VY + + ++ + ++ + + ++ Q+ EI++ S + HPN+LR+
Sbjct: 23 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 82
Query: 388 CCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIY 447
+ L+ EF P G L + LQ+ G LH +
Sbjct: 83 YFHDRKRIYLMLEFAPRGELYKELQKH-GR----FDEQRSATFMEELADALHYCHERKVI 137
Query: 448 HRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLSDKS 507
HRDIK N+L+ Y K+ADFG S + S GT YL P+ + +K
Sbjct: 138 HRDIKPENLLMGYKGELKIADFGWS---VHAPSLRRRXMCGTLDYLPPEMIEGKTHDEKV 194
Query: 508 DVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAID 543
D++ GV+ E + + D S H+E + + +D
Sbjct: 195 DLWCAGVLCYEFLVGMPPFD-SPSHTETHRRIVNVD 229
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 97/204 (47%), Gaps = 17/204 (8%)
Query: 326 FSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYRDTDS---IDQVMNEIKLLSSVSHPN 381
F + ++G G YG VY + + VA+K+ R DT++ + EI LL ++HPN
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL-DTETEGVPSTAIREISLLKELNHPN 63
Query: 382 LLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSA 441
+++LL E + LV+EF+ + L + +G+P + HS
Sbjct: 64 IVKLLDVIHTENKLYLVFEFL-HQDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 442 MNPPIYHRDIKSSNILLDYNYRSKVADFGLSR-LGMTESSHISTAPQGTPGYLDPQYH-- 498
+ HRD+K N+L++ K+ADFGL+R G+ ++ T Y P+
Sbjct: 123 R---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEV--VTLWYRAPEILLG 177
Query: 499 -QYFHLSDKSDVYSFGVVLIEIIT 521
+Y+ S D++S G + E++T
Sbjct: 178 CKYY--STAVDIWSLGCIFAEMVT 199
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 90/195 (46%), Gaps = 13/195 (6%)
Query: 332 LGTGAYGTVYAGKL-HNDDWVAIKRFR---YRDTDSIDQVMNEIKLLS-SVSHPNLLRLL 386
LG G++G V ++ D A+K + D ++ M E ++LS + +HP L +L
Sbjct: 31 LGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLF 90
Query: 387 GCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPI 446
C V EF+ G L H+Q+ R +LH + I
Sbjct: 91 CCFQTPDRLFFVMEFVNGGDLMFHIQKSRR--FDEARARFYAAEIISALMFLH---DKGI 145
Query: 447 YHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQ-GTPGYLDPQYHQYFHLSD 505
+RD+K N+LLD+ K+ADFG+ + G+ ++TA GTP Y+ P+ Q
Sbjct: 146 IYRDLKLDNVLLDHEGHCKLADFGMCKEGICNG--VTTATFCGTPDYIAPEILQEMLYGP 203
Query: 506 KSDVYSFGVVLIEII 520
D ++ GV+L E++
Sbjct: 204 AVDWWAMGVLLYEML 218
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 94/220 (42%), Gaps = 19/220 (8%)
Query: 332 LGTGAYGTVYAGKLHNDDWVAIKRFRYR---DTDSID-QVMNEIKLLSSVSHPNLLRLLG 387
LG G +G VY + ++ + ++ + ++ Q+ E+++ S + HPN+LRL G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 388 CCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIY 447
+ L+ E+ P GT+ + LQ + S Y HS +
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQ--KLSKFDEQRTATYITELANALSYCHSKR---VI 133
Query: 448 HRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLSDKS 507
HRDIK N+LL K+A+FG S + S T GT YL P+ + +K
Sbjct: 134 HRDIKPENLLLGSAGELKIANFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKV 190
Query: 508 DVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGR 547
D++S GV+ E + +P E N RI R
Sbjct: 191 DLWSLGVLCYEFLVG-------KPPFEANTYQETYKRISR 223
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 97/203 (47%), Gaps = 15/203 (7%)
Query: 326 FSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRY-RDTDSI-DQVMNEIKLLSSVSHPNL 382
F + ++G G YG VY + + VA+K+ R +T+ + + EI LL ++HPN+
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 383 LRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAM 442
++LL E + LV+EF+ + L + +G+P + HS
Sbjct: 68 VKLLDVIHTENKLYLVFEFL-HQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 126
Query: 443 NPPIYHRDIKSSNILLDYNYRSKVADFGLSR-LGMTESSHISTAPQGTPGYLDPQYH--- 498
+ HRD+K N+L++ K+ADFGL+R G+ ++ T Y P+
Sbjct: 127 ---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV--VTLWYRAPEILLGC 181
Query: 499 QYFHLSDKSDVYSFGVVLIEIIT 521
+Y+ S D++S G + E++T
Sbjct: 182 KYY--STAVDIWSLGCIFAEMVT 202
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 97/204 (47%), Gaps = 17/204 (8%)
Query: 326 FSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYRDTDS---IDQVMNEIKLLSSVSHPN 381
F + ++G G YG VY + + VA+K+ R DT++ + EI LL ++HPN
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL-DTETEGVPSTAIREISLLKELNHPN 66
Query: 382 LLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSA 441
+++LL E + LV+EF+ + L + +G+P + HS
Sbjct: 67 IVKLLDVIHTENKLYLVFEFL-SMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 125
Query: 442 MNPPIYHRDIKSSNILLDYNYRSKVADFGLSR-LGMTESSHISTAPQGTPGYLDPQYH-- 498
+ HRD+K N+L++ K+ADFGL+R G+ ++ T Y P+
Sbjct: 126 R---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV--VTLWYRAPEILLG 180
Query: 499 -QYFHLSDKSDVYSFGVVLIEIIT 521
+Y+ S D++S G + E++T
Sbjct: 181 CKYY--STAVDIWSLGCIFAEMVT 202
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 93/207 (44%), Gaps = 31/207 (14%)
Query: 332 LGTGAYGTVYAGK-LHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGCCI 390
LG G YG VYAG+ L N +AIK RD+ + EI L + H N+++ LG
Sbjct: 30 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFS 89
Query: 391 EEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXX----XXXXXXXXXYLHSAMNPPI 446
E G + E +P G+L L+ + G P YLH I
Sbjct: 90 ENGFIKIFMEQVPGGSLSALLRSKWG---PLKDNEQTIGFYTKQILEGLKYLHDNQ---I 143
Query: 447 YHRDIKSSNILLD-YNYRSKVADFGLSR--LGMTESSHISTAPQGTPGYLDPQYHQYFHL 503
HRDIK N+L++ Y+ K++DFG S+ G+ + T GT Y+ P+ +
Sbjct: 144 VHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFT---GTLQYMAPE------I 194
Query: 504 SDK--------SDVYSFGVVLIEIITA 522
DK +D++S G +IE+ T
Sbjct: 195 IDKGPRGYGKAADIWSLGCTIIEMATG 221
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 103/237 (43%), Gaps = 15/237 (6%)
Query: 328 EKHRLGTGAYGTVYAGKLH-----NDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNL 382
E LG+G +GTV G V I + D D+++ E ++ + +P +
Sbjct: 15 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 74
Query: 383 LRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAM 442
+R++G C E +LV E G L ++LQ+ R + YL +
Sbjct: 75 VRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRH--VKDKNIIELVHQVSMGMKYLEES- 130
Query: 443 NPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGT--PGYLDPQYHQY 500
HRD+ + N+LL + +K++DFGLS+ + + G + P+ Y
Sbjct: 131 --NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAPECINY 188
Query: 501 FHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIG--RGCVDEIID 555
+ S KSDV+SFGV++ E + + SEV +R+G GC E+ D
Sbjct: 189 YKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREMYD 245
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 95/216 (43%), Gaps = 13/216 (6%)
Query: 332 LGTGAYGTVYAGKLHNDDWVAIKRFRYR---DTDSID-QVMNEIKLLSSVSHPNLLRLLG 387
LG G +G VY + + ++ + ++ + + ++ Q+ EI++ S + HPN+LR+
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 81
Query: 388 CCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIY 447
+ L+ EF P G L + LQ+ G LH +
Sbjct: 82 YFHDRKRIYLMLEFAPRGELYKELQKH-GR----FDEQRSATFMEELADALHYCHERKVI 136
Query: 448 HRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLSDKS 507
HRDIK N+L+ Y K+ADFG S + S GT YL P+ + +K
Sbjct: 137 HRDIKPENLLMGYKGELKIADFGWS---VHAPSLRRRXMCGTLDYLPPEMIEGKTHDEKV 193
Query: 508 DVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAID 543
D++ GV+ E + + D S H+E + + +D
Sbjct: 194 DLWCAGVLCYEFLVGMPPFD-SPSHTETHRRIVNVD 228
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 96/205 (46%), Gaps = 16/205 (7%)
Query: 326 FSEKHRLGTGAYGTVYAGKLHNDDW-----VAIKRFRYRDTDSID-QVMNEIKLLSSVSH 379
F + LG+GA+GTVY G + VAIK R + + ++++E +++SV +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 380 PNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLH 439
P++ RLLG C+ L+ + MP G L ++ RE + YL
Sbjct: 77 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYLE 134
Query: 440 SAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTP---GYLDPQ 496
+ HRD+ + N+L+ K+ DFGL++L E P L+
Sbjct: 135 DRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 191
Query: 497 YHQYFHLSDKSDVYSFGVVLIEIIT 521
H+ + + +SDV+S+GV + E++T
Sbjct: 192 LHRIY--THQSDVWSYGVTVWELMT 214
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 96/205 (46%), Gaps = 16/205 (7%)
Query: 326 FSEKHRLGTGAYGTVYAGKLHNDDW-----VAIKRFRYRDTDSID-QVMNEIKLLSSVSH 379
F + LG+GA+GTVY G + VAIK R + + ++++E +++SV +
Sbjct: 21 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 80
Query: 380 PNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLH 439
P++ RLLG C+ L+ + MP G L ++ RE + YL
Sbjct: 81 PHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYLE 138
Query: 440 SAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTP---GYLDPQ 496
+ HRD+ + N+L+ K+ DFGL++L E P L+
Sbjct: 139 DRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 195
Query: 497 YHQYFHLSDKSDVYSFGVVLIEIIT 521
H+ + + +SDV+S+GV + E++T
Sbjct: 196 LHRIY--THQSDVWSYGVTVWELMT 218
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 100/230 (43%), Gaps = 42/230 (18%)
Query: 316 YKEIEKATSFFSEKHRLGTGAYGTVYAGKLHNDDWVAIKRFRYRDTDS-IDQVMNEIKLL 374
+ ++ KAT+F H G Y TV A+K + + S + +++E +L
Sbjct: 36 FGKVVKATAF----HLKGRAGYTTV-----------AVKMLKENASPSELRDLLSEFNVL 80
Query: 375 SSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSG---------------- 418
V+HP++++L G C ++G +L+ E+ G+L L+ R G
Sbjct: 81 KQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLD 140
Query: 419 ------LPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLS 472
L YL + HRD+ + NIL+ + K++DFGLS
Sbjct: 141 HPDERALTMGDLISFAWQISQGMQYLAEM---KLVHRDLAARNILVAEGRKMKISDFGLS 197
Query: 473 RLGMTESSHISTAPQGTPGYLDPQYHQYFHL-SDKSDVYSFGVVLIEIIT 521
R E S++ + P + H+ + +SDV+SFGV+L EI+T
Sbjct: 198 RDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 91/195 (46%), Gaps = 13/195 (6%)
Query: 332 LGTGAYGTVYAGK-LHNDDWVAIKRFRYRDTDSIDQVM---NEIKLLSSVSHPNLLRLLG 387
LGTG++G V+ + HN + A+K + + QV +E +LS V+HP ++R+ G
Sbjct: 14 LGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWG 73
Query: 388 CCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIY 447
+ + ++ +++ G L L++ P YLHS I
Sbjct: 74 TFQDAQQIFMIMDYIEGGELFSLLRK--SQRFPNPVAKFYAAEVCLALEYLHSK---DII 128
Query: 448 HRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLSDKS 507
+RD+K NILLD N K+ DFG ++ ++ GTP Y+ P+ +
Sbjct: 129 YRDLKPENILLDKNGHIKITDFGFAKY----VPDVTYXLCGTPDYIAPEVVSTKPYNKSI 184
Query: 508 DVYSFGVVLIEIITA 522
D +SFG+++ E++
Sbjct: 185 DWWSFGILIYEMLAG 199
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 97/204 (47%), Gaps = 17/204 (8%)
Query: 326 FSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYRDTDS---IDQVMNEIKLLSSVSHPN 381
F + ++G G YG VY + + VA+K+ R DT++ + EI LL ++HPN
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL-DTETEGVPSTAIREISLLKELNHPN 65
Query: 382 LLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSA 441
+++LL E + LV+EF+ + L + +G+P + HS
Sbjct: 66 IVKLLDVIHTENKLYLVFEFL-SMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 124
Query: 442 MNPPIYHRDIKSSNILLDYNYRSKVADFGLSR-LGMTESSHISTAPQGTPGYLDPQYH-- 498
+ HRD+K N+L++ K+ADFGL+R G+ ++ T Y P+
Sbjct: 125 R---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV--VTLWYRAPEILLG 179
Query: 499 -QYFHLSDKSDVYSFGVVLIEIIT 521
+Y+ S D++S G + E++T
Sbjct: 180 CKYY--STAVDIWSLGCIFAEMVT 201
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 102/224 (45%), Gaps = 17/224 (7%)
Query: 307 GNSSVPFYPYKEIEKATSFFSEKHRLGTGAYGTVYAGKLHNDDW-----VAIKRFRYRDT 361
G+ P I K T F K LG+GA+GTVY G + VAIK R +
Sbjct: 24 GSGEAPNQALLRILKETEFKKIK-VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS 82
Query: 362 DSID-QVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLP 420
+ ++++E +++SV +P++ RLLG C+ L+ + MP G L ++ RE +
Sbjct: 83 PKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYV-REHKDNIG 140
Query: 421 WXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESS 480
YL + HRD+ + N+L+ K+ DFGL++L E
Sbjct: 141 SQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK 197
Query: 481 HISTAPQGTP---GYLDPQYHQYFHLSDKSDVYSFGVVLIEIIT 521
P L+ H+ + + +SDV+S+GV + E++T
Sbjct: 198 EYHAEGGKVPIKWMALESILHRIY--THQSDVWSYGVTVWELMT 239
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 96/205 (46%), Gaps = 16/205 (7%)
Query: 326 FSEKHRLGTGAYGTVYAGKLHNDDW-----VAIKRFRYRDTDSID-QVMNEIKLLSSVSH 379
F + LG+GA+GTVY G + VAIK R + + ++++E +++SV +
Sbjct: 18 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 77
Query: 380 PNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLH 439
P++ RLLG C+ L+ + MP G L ++ RE + YL
Sbjct: 78 PHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYLE 135
Query: 440 SAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTP---GYLDPQ 496
+ HRD+ + N+L+ K+ DFGL++L E P L+
Sbjct: 136 DRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 192
Query: 497 YHQYFHLSDKSDVYSFGVVLIEIIT 521
H+ + + +SDV+S+GV + E++T
Sbjct: 193 LHRIY--THQSDVWSYGVTVWELMT 215
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 96/205 (46%), Gaps = 16/205 (7%)
Query: 326 FSEKHRLGTGAYGTVYAGKLHNDDW-----VAIKRFRYRDTDSID-QVMNEIKLLSSVSH 379
F + LG+GA+GTVY G + VAIK R + + ++++E +++SV +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 380 PNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLH 439
P++ RLLG C+ L+ + MP G L ++ RE + YL
Sbjct: 80 PHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYLE 137
Query: 440 SAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTP---GYLDPQ 496
+ HRD+ + N+L+ K+ DFGL++L E P L+
Sbjct: 138 DRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 194
Query: 497 YHQYFHLSDKSDVYSFGVVLIEIIT 521
H+ + + +SDV+S+GV + E++T
Sbjct: 195 LHRIY--THQSDVWSYGVTVWELMT 217
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 93/206 (45%), Gaps = 23/206 (11%)
Query: 324 SFFSEKHRLGTGAYGTVY-AGKLHNDDWVAIKRFRYRDTDSIDQ---VMNEIKLLSSVSH 379
FS+ +G G++G VY A + N + VAIK+ Y S ++ ++ E++ L + H
Sbjct: 54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRH 113
Query: 380 PNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLH 439
PN ++ GC + E LV E+ G+ L+ + L YLH
Sbjct: 114 PNTIQYRGCYLREHTAWLVMEYC-LGSASDLLEVHK-KPLQEVEIAAVTHGALQGLAYLH 171
Query: 440 SAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQY-- 497
S + HRD+K+ NILL K+ DFG + + + + GTP ++ P+
Sbjct: 172 SH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFV-----GTPYWMAPEVIL 223
Query: 498 ----HQYFHLSDKSDVYSFGVVLIEI 519
QY K DV+S G+ IE+
Sbjct: 224 AMDEGQY---DGKVDVWSLGITCIEL 246
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 96/205 (46%), Gaps = 16/205 (7%)
Query: 326 FSEKHRLGTGAYGTVYAGKLHNDDW-----VAIKRFRYRDTDSID-QVMNEIKLLSSVSH 379
F + LG+GA+GTVY G + VAIK R + + ++++E +++SV +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 380 PNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLH 439
P++ RLLG C+ L+ + MP G L ++ RE + YL
Sbjct: 77 PHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYLE 134
Query: 440 SAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTP---GYLDPQ 496
+ HRD+ + N+L+ K+ DFGL++L E P L+
Sbjct: 135 DRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 191
Query: 497 YHQYFHLSDKSDVYSFGVVLIEIIT 521
H+ + + +SDV+S+GV + E++T
Sbjct: 192 LHRIY--THQSDVWSYGVTVWELMT 214
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 94/216 (43%), Gaps = 13/216 (6%)
Query: 332 LGTGAYGTVYAGKLHNDDWVAIKRFRYR---DTDSID-QVMNEIKLLSSVSHPNLLRLLG 387
LG G +G VY + + ++ + ++ + + ++ Q+ EI++ S + HPN+LR+
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 81
Query: 388 CCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIY 447
+ L+ EF P G L + LQ+ LH +
Sbjct: 82 YFHDRKRIYLMLEFAPRGELYKELQKHGRFD-----EQRSATFMEELADALHYCHERKVI 136
Query: 448 HRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLSDKS 507
HRDIK N+L+ Y K+ADFG S + S GT YL P+ + +K
Sbjct: 137 HRDIKPENLLMGYKGELKIADFGWS---VHAPSLRRRXMCGTLDYLPPEMIEGKTHDEKV 193
Query: 508 DVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAID 543
D++ GV+ E + + D S H+E + + +D
Sbjct: 194 DLWCAGVLCYEFLVGMPPFD-SPSHTETHRRIVNVD 228
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 96/205 (46%), Gaps = 16/205 (7%)
Query: 326 FSEKHRLGTGAYGTVYAGKLHNDDW-----VAIKRFRYRDTDSID-QVMNEIKLLSSVSH 379
F + LG+GA+GTVY G + VAIK R + + ++++E +++SV +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 380 PNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLH 439
P++ RLLG C+ L+ + MP G L ++ RE + YL
Sbjct: 77 PHVCRLLGICLTSTVQ-LITQLMPFGXLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYLE 134
Query: 440 SAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTP---GYLDPQ 496
+ HRD+ + N+L+ K+ DFGL++L E P L+
Sbjct: 135 DRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 191
Query: 497 YHQYFHLSDKSDVYSFGVVLIEIIT 521
H+ + + +SDV+S+GV + E++T
Sbjct: 192 LHRIY--THQSDVWSYGVTVWELMT 214
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 98/207 (47%), Gaps = 20/207 (9%)
Query: 332 LGTGAYGTVY---AGKLHNDDWV---AIKRFR-YRDTDSIDQVMNEIKLLSSV-SHPNLL 383
LG GA+G V A L +D V A+K + D + +M+E+K++S + H N++
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 384 RLLGCCIEEGEPILVYEFMPNGTLCQHLQR--------ERGSGLPWXXXXXXXXXXXXXX 435
LLG C G +++ E+ G L L+R E G L
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGM 173
Query: 436 XYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTP-GYLD 494
+L S HRD+ + N+LL + +K+ DFGL+R M +S++I P ++
Sbjct: 174 AFLASK---NCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMA 230
Query: 495 PQYHQYFHLSDKSDVYSFGVVLIEIIT 521
P+ + +SDV+S+G++L EI +
Sbjct: 231 PESIFDCVYTVQSDVWSYGILLWEIFS 257
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 96/205 (46%), Gaps = 16/205 (7%)
Query: 326 FSEKHRLGTGAYGTVYAGKLHNDDW-----VAIKRFRYRDTDSID-QVMNEIKLLSSVSH 379
F + LG+GA+GTVY G + VAIK R + + ++++E +++SV +
Sbjct: 24 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 380 PNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLH 439
P++ RLLG C+ L+ + MP G L ++ RE + YL
Sbjct: 84 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYLE 141
Query: 440 SAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTP---GYLDPQ 496
+ HRD+ + N+L+ K+ DFGL++L E P L+
Sbjct: 142 DRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 198
Query: 497 YHQYFHLSDKSDVYSFGVVLIEIIT 521
H+ + + +SDV+S+GV + E++T
Sbjct: 199 LHRIY--THQSDVWSYGVTVWELMT 221
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 102/228 (44%), Gaps = 16/228 (7%)
Query: 304 QAAGNSSVP-FYPYKEIEKATSF-----FSEKHRLGTGAYGTVY-AGKLHNDDWVAIKR- 355
Q VP F P K + + F + ++G G + VY A L + VA+K+
Sbjct: 6 QGMQGPPVPQFQPQKALRPDMGYNTLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKV 65
Query: 356 --FRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQ- 412
F D + + EI LL ++HPN+++ IE+ E +V E G L + ++
Sbjct: 66 QIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKH 125
Query: 413 -RERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGL 471
+++ +P ++HS + HRDIK +N+ + K+ D GL
Sbjct: 126 FKKQKRLIPERTVWKYFVQLCSALEHMHSRR---VMHRDIKPANVFITATGVVKLGDLGL 182
Query: 472 SRLGMTESSHISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEI 519
R ++++ + GTP Y+ P+ + KSD++S G +L E+
Sbjct: 183 GRFFSSKTTAAHSL-VGTPYYMSPERIHENGYNFKSDIWSLGCLLYEM 229
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 93/220 (42%), Gaps = 19/220 (8%)
Query: 332 LGTGAYGTVYAGKLHNDDWVAIKRFRYR---DTDSID-QVMNEIKLLSSVSHPNLLRLLG 387
LG G +G VY + ++ + ++ + ++ Q+ E+++ S + HPN+LRL G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 388 CCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIY 447
+ L+ E+ P GT+ + LQ + S Y HS +
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQ--KLSKFDEQRTATYITELANALSYCHSKR---VI 130
Query: 448 HRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLSDKS 507
HRDIK N+LL K+ADFG S + S GT YL P+ + +K
Sbjct: 131 HRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRXXLCGTLDYLPPEMIEGRMHDEKV 187
Query: 508 DVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGR 547
D++S GV+ E + +P E N RI R
Sbjct: 188 DLWSLGVLCYEFLVG-------KPPFEANTYQETYKRISR 220
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 96/205 (46%), Gaps = 16/205 (7%)
Query: 326 FSEKHRLGTGAYGTVYAGKLHNDDW-----VAIKRFRYRDTDSID-QVMNEIKLLSSVSH 379
F + LG+GA+GTVY G + VAIK R + + ++++E +++SV +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 380 PNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLH 439
P++ RLLG C+ L+ + MP G L ++ RE + YL
Sbjct: 80 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYLE 137
Query: 440 SAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTP---GYLDPQ 496
+ HRD+ + N+L+ K+ DFGL++L E P L+
Sbjct: 138 DRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 194
Query: 497 YHQYFHLSDKSDVYSFGVVLIEIIT 521
H+ + + +SDV+S+GV + E++T
Sbjct: 195 LHRIY--THQSDVWSYGVTVWELMT 217
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 96/205 (46%), Gaps = 16/205 (7%)
Query: 326 FSEKHRLGTGAYGTVYAGKLHNDDW-----VAIKRFRYRDTDSID-QVMNEIKLLSSVSH 379
F + LG+GA+GTVY G + VAIK R + + ++++E +++SV +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 380 PNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLH 439
P++ RLLG C+ L+ + MP G L ++ RE + YL
Sbjct: 80 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYLE 137
Query: 440 SAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTP---GYLDPQ 496
+ HRD+ + N+L+ K+ DFGL++L E P L+
Sbjct: 138 DRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 194
Query: 497 YHQYFHLSDKSDVYSFGVVLIEIIT 521
H+ + + +SDV+S+GV + E++T
Sbjct: 195 LHRIY--THQSDVWSYGVTVWELMT 217
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 98/204 (48%), Gaps = 17/204 (8%)
Query: 326 FSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYRDTDS---IDQVMNEIKLLSSVSHPN 381
F + ++G G YG VY + + VA+ + R DT++ + EI LL ++HPN
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRL-DTETEGVPSTAIREISLLKELNHPN 63
Query: 382 LLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSA 441
+++LL E + LV+EF+ + L + + +G+P + HS
Sbjct: 64 IVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 442 MNPPIYHRDIKSSNILLDYNYRSKVADFGLSR-LGMTESSHISTAPQGTPGYLDPQYH-- 498
+ HRD+K N+L++ K+ADFGL+R G+ ++ T T Y P+
Sbjct: 123 R---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWYRAPEILLG 177
Query: 499 -QYFHLSDKSDVYSFGVVLIEIIT 521
+Y+ S D++S G + E++T
Sbjct: 178 CKYY--STAVDIWSLGCIFAEMVT 199
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 98/204 (48%), Gaps = 17/204 (8%)
Query: 326 FSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYRDTDS---IDQVMNEIKLLSSVSHPN 381
F + ++G G YG VY + + VA+ + R DT++ + EI LL ++HPN
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRL-DTETEGVPSTAIREISLLKELNHPN 62
Query: 382 LLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSA 441
+++LL E + LV+EF+ + L + + +G+P + HS
Sbjct: 63 IVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 442 MNPPIYHRDIKSSNILLDYNYRSKVADFGLSR-LGMTESSHISTAPQGTPGYLDPQYH-- 498
+ HRD+K N+L++ K+ADFGL+R G+ ++ T T Y P+
Sbjct: 122 R---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWYRAPEILLG 176
Query: 499 -QYFHLSDKSDVYSFGVVLIEIIT 521
+Y+ S D++S G + E++T
Sbjct: 177 CKYY--STAVDIWSLGCIFAEMVT 198
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 98/216 (45%), Gaps = 30/216 (13%)
Query: 332 LGTGAYGTVYAGK---LHNDD-----WVAIKRFRYRDTDS-IDQVMNEIKLLSSV-SHPN 381
LG GA+G V + L D VA+K + T+ + +++E++++ + H N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 382 LLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHS- 440
++ LLG C ++G ++ E+ G L ++LQ GL + L S
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 441 ----------AMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTP 490
+ HRD+ + N+L+ + K+ADFGL+R + HI + T
Sbjct: 156 AYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLAR----DIHHIDYYKKTTN 211
Query: 491 GYLDPQYHQYFHLSDK-----SDVYSFGVVLIEIIT 521
G L ++ L D+ SDV+SFGV+L EI T
Sbjct: 212 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 93/207 (44%), Gaps = 31/207 (14%)
Query: 332 LGTGAYGTVYAGK-LHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGCCI 390
LG G YG VYAG+ L N +AIK RD+ + EI L + H N+++ LG
Sbjct: 16 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFS 75
Query: 391 EEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXX----XXXXXXXXXYLHSAMNPPI 446
E G + E +P G+L L+ + G P YLH I
Sbjct: 76 ENGFIKIFMEQVPGGSLSALLRSKWG---PLKDNEQTIGFYTKQILEGLKYLHDNQ---I 129
Query: 447 YHRDIKSSNILLD-YNYRSKVADFGLSR--LGMTESSHISTAPQGTPGYLDPQYHQYFHL 503
HRDIK N+L++ Y+ K++DFG S+ G+ + T GT Y+ P+ +
Sbjct: 130 VHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFT---GTLQYMAPE------I 180
Query: 504 SDK--------SDVYSFGVVLIEIITA 522
DK +D++S G +IE+ T
Sbjct: 181 IDKGPRGYGKAADIWSLGCTIIEMATG 207
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 96/205 (46%), Gaps = 16/205 (7%)
Query: 326 FSEKHRLGTGAYGTVYAGKLHNDDW-----VAIKRFRYRDTDSID-QVMNEIKLLSSVSH 379
F + LG+GA+GTVY G + VAIK R + + ++++E +++SV +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 380 PNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLH 439
P++ RLLG C+ L+ + MP G L ++ RE + YL
Sbjct: 77 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYLE 134
Query: 440 SAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTP---GYLDPQ 496
+ HRD+ + N+L+ K+ DFGL++L E P L+
Sbjct: 135 DRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 191
Query: 497 YHQYFHLSDKSDVYSFGVVLIEIIT 521
H+ + + +SDV+S+GV + E++T
Sbjct: 192 LHRIY--THQSDVWSYGVTVWELMT 214
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 96/205 (46%), Gaps = 16/205 (7%)
Query: 326 FSEKHRLGTGAYGTVYAGKLHNDDW-----VAIKRFRYRDTDSID-QVMNEIKLLSSVSH 379
F + LG+GA+GTVY G + VAIK R + + ++++E +++SV +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 380 PNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLH 439
P++ RLLG C+ L+ + MP G L ++ RE + YL
Sbjct: 80 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYLE 137
Query: 440 SAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTP---GYLDPQ 496
+ HRD+ + N+L+ K+ DFGL++L E P L+
Sbjct: 138 DRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 194
Query: 497 YHQYFHLSDKSDVYSFGVVLIEIIT 521
H+ + + +SDV+S+GV + E++T
Sbjct: 195 LHRIY--THQSDVWSYGVTVWELMT 217
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 96/205 (46%), Gaps = 16/205 (7%)
Query: 326 FSEKHRLGTGAYGTVYAGKLHNDDW-----VAIKRFRYRDTDSID-QVMNEIKLLSSVSH 379
F + LG+GA+GTVY G + VAIK R + + ++++E +++SV +
Sbjct: 23 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 82
Query: 380 PNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLH 439
P++ RLLG C+ L+ + MP G L ++ RE + YL
Sbjct: 83 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYLE 140
Query: 440 SAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTP---GYLDPQ 496
+ HRD+ + N+L+ K+ DFGL++L E P L+
Sbjct: 141 DRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 197
Query: 497 YHQYFHLSDKSDVYSFGVVLIEIIT 521
H+ + + +SDV+S+GV + E++T
Sbjct: 198 LHRIY--THQSDVWSYGVTVWELMT 220
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 96/205 (46%), Gaps = 16/205 (7%)
Query: 326 FSEKHRLGTGAYGTVYAGKLHNDDW-----VAIKRFRYRDTDSID-QVMNEIKLLSSVSH 379
F + LG+GA+GTVY G + VAIK R + + ++++E +++SV +
Sbjct: 27 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 86
Query: 380 PNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLH 439
P++ RLLG C+ L+ + MP G L ++ RE + YL
Sbjct: 87 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYLE 144
Query: 440 SAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTP---GYLDPQ 496
+ HRD+ + N+L+ K+ DFGL++L E P L+
Sbjct: 145 DRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 201
Query: 497 YHQYFHLSDKSDVYSFGVVLIEIIT 521
H+ + + +SDV+S+GV + E++T
Sbjct: 202 LHRIY--THQSDVWSYGVTVWELMT 224
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 96/205 (46%), Gaps = 16/205 (7%)
Query: 326 FSEKHRLGTGAYGTVYAGKLHNDDW-----VAIKRFRYRDTDSID-QVMNEIKLLSSVSH 379
F + LG+GA+GTVY G + VAIK R + + ++++E +++SV +
Sbjct: 11 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 70
Query: 380 PNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLH 439
P++ RLLG C+ L+ + MP G L ++ RE + YL
Sbjct: 71 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYLE 128
Query: 440 SAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTP---GYLDPQ 496
+ HRD+ + N+L+ K+ DFGL++L E P L+
Sbjct: 129 DRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 185
Query: 497 YHQYFHLSDKSDVYSFGVVLIEIIT 521
H+ + + +SDV+S+GV + E++T
Sbjct: 186 LHRIY--THQSDVWSYGVTVWELMT 208
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 93/198 (46%), Gaps = 13/198 (6%)
Query: 330 HRLGTGAYGTVYAGKLHND------DWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLL 383
++G G++G K D + I R ++ + + E+ +L+++ HPN++
Sbjct: 30 QKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKERE---ESRREVAVLANMKHPNIV 86
Query: 384 RLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMN 443
+ E G +V ++ G L + + ++G ++H +
Sbjct: 87 QYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVH---D 143
Query: 444 PPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHL 503
I HRDIKS NI L + ++ DFG++R+ + + ++ A GTP YL P+ +
Sbjct: 144 RKILHRDIKSQNIFLTKDGTVQLGDFGIARV-LNSTVELARACIGTPYYLSPEICENKPY 202
Query: 504 SDKSDVYSFGVVLIEIIT 521
++KSD+++ G VL E+ T
Sbjct: 203 NNKSDIWALGCVLYELCT 220
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 93/220 (42%), Gaps = 19/220 (8%)
Query: 332 LGTGAYGTVYAGKLHNDDWVAIKRFRYR---DTDSID-QVMNEIKLLSSVSHPNLLRLLG 387
LG G +G VY + ++ + ++ + ++ Q+ E+++ S + HPN+LRL G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 388 CCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIY 447
+ L+ E+ P GT+ + LQ + S Y HS +
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQ--KLSKFDEQRTATYITELANALSYCHSKR---VI 133
Query: 448 HRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLSDKS 507
HRDIK N+LL K+ADFG S + S GT YL P+ + +K
Sbjct: 134 HRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRXXLCGTLDYLPPEMIEGRMHDEKV 190
Query: 508 DVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGR 547
D++S GV+ E + +P E N RI R
Sbjct: 191 DLWSLGVLCYEFLVG-------KPPFEANTYQETYKRISR 223
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 96/205 (46%), Gaps = 16/205 (7%)
Query: 326 FSEKHRLGTGAYGTVYAGKLHNDDW-----VAIKRFRYRDTDSID-QVMNEIKLLSSVSH 379
F + LG+GA+GTVY G + VAIK R + + ++++E +++SV +
Sbjct: 14 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 73
Query: 380 PNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLH 439
P++ RLLG C+ L+ + MP G L ++ RE + YL
Sbjct: 74 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAEGMNYLE 131
Query: 440 SAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTP---GYLDPQ 496
+ HRD+ + N+L+ K+ DFGL++L E P L+
Sbjct: 132 DRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 188
Query: 497 YHQYFHLSDKSDVYSFGVVLIEIIT 521
H+ + + +SDV+S+GV + E++T
Sbjct: 189 LHRIY--THQSDVWSYGVTVWELMT 211
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 93/206 (45%), Gaps = 23/206 (11%)
Query: 324 SFFSEKHRLGTGAYGTVY-AGKLHNDDWVAIKRFRYRDTDSIDQ---VMNEIKLLSSVSH 379
FS+ +G G++G VY A + N + VAIK+ Y S ++ ++ E++ L + H
Sbjct: 15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRH 74
Query: 380 PNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLH 439
PN ++ GC + E LV E+ G+ L+ + L YLH
Sbjct: 75 PNTIQYRGCYLREHTAWLVMEYCL-GSASDLLEVHK-KPLQEVEIAAVTHGALQGLAYLH 132
Query: 440 SAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQY-- 497
S + HRD+K+ NILL K+ DFG + + + + GTP ++ P+
Sbjct: 133 SH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFV-----GTPYWMAPEVIL 184
Query: 498 ----HQYFHLSDKSDVYSFGVVLIEI 519
QY K DV+S G+ IE+
Sbjct: 185 AMDEGQY---DGKVDVWSLGITCIEL 207
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 97/211 (45%), Gaps = 19/211 (9%)
Query: 322 ATSFFSEKHRLGTGAYGTVYAGK-LHNDDWVAIKRFRYRDTD-----SIDQVMNEIKLLS 375
ATS + +G GAYGTVY + H+ +VA+K R + + S + + ++ L
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 376 SVSHPNLLRLLGCCI-----EEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXX 430
+ HPN++RL+ C E + LV+E + + L +L + GLP
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQ 120
Query: 431 XXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAP-QGT 489
+LH+ I HRD+K NIL+ K+ADFGL+R+ S ++ AP T
Sbjct: 121 FLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARI---YSYQMALAPVVVT 174
Query: 490 PGYLDPQYHQYFHLSDKSDVYSFGVVLIEII 520
Y P+ + D++S G + E+
Sbjct: 175 LWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 97/212 (45%), Gaps = 18/212 (8%)
Query: 324 SFFSEKH-----RLGTGAYGTVYAGKL-----HNDDWVAIKRFRYRDTDSIDQVMNEIKL 373
+ F E+H +LG G +G+V + + VA+K+ ++ D EI++
Sbjct: 6 TIFEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQI 65
Query: 374 LSSVSHPNLLRLLGCCIEEGEPIL--VYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXX 431
L ++ +++ G G L V E++P+G L LQR R L
Sbjct: 66 LKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR-LDASRLLLYSSQI 124
Query: 432 XXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSR-LGMTESSHISTAPQGTP 490
YL S HRD+ + NIL++ K+ADFGL++ L + + ++ P +P
Sbjct: 125 CKGMEYLGSRR---CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSP 181
Query: 491 -GYLDPQYHQYFHLSDKSDVYSFGVVLIEIIT 521
+ P+ S +SDV+SFGVVL E+ T
Sbjct: 182 IFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 95/224 (42%), Gaps = 27/224 (12%)
Query: 332 LGTGAYGTVYAGKLHNDDWVAIKRFRYR---DTDSID-QVMNEIKLLSSVSHPNLLRLLG 387
LG G +G VY + ++ + ++ + ++ Q+ E+++ S + HPN+LRL G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 388 CCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIY 447
+ L+ E+ P GT+ + LQ + S Y HS +
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQ--KLSKFDEQRTATYITELANALSYCHSKR---VI 133
Query: 448 HRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQ----GTPGYLDPQYHQYFHL 503
HRDIK N+LL K+ADFG S H ++ + GT YL P+ +
Sbjct: 134 HRDIKPENLLLGSAGELKIADFGW-------SVHAPSSRRDDLCGTLDYLPPEMIEGRMH 186
Query: 504 SDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGR 547
+K D++S GV+ E + +P E N RI R
Sbjct: 187 DEKVDLWSLGVLCYEFLVG-------KPPFEANTYQETYKRISR 223
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 97/212 (45%), Gaps = 18/212 (8%)
Query: 324 SFFSEKH-----RLGTGAYGTVYAGKL-----HNDDWVAIKRFRYRDTDSIDQVMNEIKL 373
+ F E+H +LG G +G+V + + VA+K+ ++ D EI++
Sbjct: 18 TIFEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQI 77
Query: 374 LSSVSHPNLLRLLGCCIEEGEPIL--VYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXX 431
L ++ +++ G G L V E++P+G L LQR R L
Sbjct: 78 LKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR-LDASRLLLYSSQI 136
Query: 432 XXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSR-LGMTESSHISTAPQGTP 490
YL S HRD+ + NIL++ K+ADFGL++ L + + ++ P +P
Sbjct: 137 CKGMEYLGSRR---CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSP 193
Query: 491 -GYLDPQYHQYFHLSDKSDVYSFGVVLIEIIT 521
+ P+ S +SDV+SFGVVL E+ T
Sbjct: 194 IFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 99/230 (43%), Gaps = 42/230 (18%)
Query: 316 YKEIEKATSFFSEKHRLGTGAYGTVYAGKLHNDDWVAIKRFRYRDTDS-IDQVMNEIKLL 374
+ ++ KAT+F H G Y TV A+K + + S + +++E +L
Sbjct: 36 FGKVVKATAF----HLKGRAGYTTV-----------AVKMLKENASPSELRDLLSEFNVL 80
Query: 375 SSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSG---------------- 418
V+HP++++L G C ++G +L+ E+ G+L L+ R G
Sbjct: 81 KQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLD 140
Query: 419 ------LPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLS 472
L YL + HRD+ + NIL+ + K++DFGLS
Sbjct: 141 HPDERALTMGDLISFAWQISQGMQYLAEM---KLVHRDLAARNILVAEGRKMKISDFGLS 197
Query: 473 RLGMTESSHISTAPQGTPGYLDPQYHQYFHL-SDKSDVYSFGVVLIEIIT 521
R E S + + P + H+ + +SDV+SFGV+L EI+T
Sbjct: 198 RDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 99/216 (45%), Gaps = 30/216 (13%)
Query: 332 LGTGAYGTVYAGKLHNDD--------WVAIKRFRYRDTDS-IDQVMNEIKLLSSV-SHPN 381
LG GA+G V + D VA+K + T+ + +++E++++ + H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 382 LLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHS- 440
++ LLG C ++G ++ E+ G L ++L+ R G+ + L S
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 441 ----------AMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTP 490
+ HRD+ + N+L+ N K+ADFGL+R + ++I + T
Sbjct: 163 TYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR----DINNIDXXKKTTN 218
Query: 491 GYLDPQYHQYFHLSDK-----SDVYSFGVVLIEIIT 521
G L ++ L D+ SDV+SFGV++ EI T
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 99/230 (43%), Gaps = 42/230 (18%)
Query: 316 YKEIEKATSFFSEKHRLGTGAYGTVYAGKLHNDDWVAIKRFRYRDTDS-IDQVMNEIKLL 374
+ ++ KAT+F H G Y TV A+K + + S + +++E +L
Sbjct: 36 FGKVVKATAF----HLKGRAGYTTV-----------AVKMLKENASPSELRDLLSEFNVL 80
Query: 375 SSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSG---------------- 418
V+HP++++L G C ++G +L+ E+ G+L L+ R G
Sbjct: 81 KQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLD 140
Query: 419 ------LPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLS 472
L YL + HRD+ + NIL+ + K++DFGLS
Sbjct: 141 HPDERALTMGDLISFAWQISQGMQYLAEM---SLVHRDLAARNILVAEGRKMKISDFGLS 197
Query: 473 RLGMTESSHISTAPQGTPGYLDPQYHQYFHL-SDKSDVYSFGVVLIEIIT 521
R E S + + P + H+ + +SDV+SFGV+L EI+T
Sbjct: 198 RDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 97/212 (45%), Gaps = 18/212 (8%)
Query: 324 SFFSEKH-----RLGTGAYGTVYAGKL-----HNDDWVAIKRFRYRDTDSIDQVMNEIKL 373
+ F E+H +LG G +G+V + + VA+K+ ++ D EI++
Sbjct: 5 TIFEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQI 64
Query: 374 LSSVSHPNLLRLLGCCIEEGEPIL--VYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXX 431
L ++ +++ G G L V E++P+G L LQR R L
Sbjct: 65 LKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR-LDASRLLLYSSQI 123
Query: 432 XXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSR-LGMTESSHISTAPQGTP 490
YL S HRD+ + NIL++ K+ADFGL++ L + + ++ P +P
Sbjct: 124 CKGMEYLGSRR---CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSP 180
Query: 491 -GYLDPQYHQYFHLSDKSDVYSFGVVLIEIIT 521
+ P+ S +SDV+SFGVVL E+ T
Sbjct: 181 IFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 212
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 95/207 (45%), Gaps = 17/207 (8%)
Query: 332 LGTGAYGTVYAGKLHNDD------WVAIKRFRYRDTDSIDQ-VMNEIKLLSSVSHP-NLL 383
LG GA+G V D VA+K + T S + +M+E+K+L + H N++
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 384 RLLGCCIEEGEPILVY-EFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXY----- 437
LLG C + G P++V EF G L +L+ +R +P+ Y
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVA 154
Query: 438 --LHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTP-GYLD 494
+ + HRD+ + NILL K+ DFGL+R + ++ P ++
Sbjct: 155 KGMEFLASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLPLKWMA 214
Query: 495 PQYHQYFHLSDKSDVYSFGVVLIEIIT 521
P+ + +SDV+SFGV+L EI +
Sbjct: 215 PETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 92/211 (43%), Gaps = 22/211 (10%)
Query: 335 GAYGTVYAGKLHNDDWVAIKRFRYRDTDS---IDQVMNEIKLLSSVSHPNLLRLLGCCIE 391
G +G VY K N + + + DT S ++ M EI +L+S HPN+++LL
Sbjct: 21 GDFGKVY--KAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYY 78
Query: 392 EGEPILVYEFMPNGTL-CQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRD 450
E ++ EF G + L+ ER L YLH + I HRD
Sbjct: 79 ENNLWILIEFCAGGAVDAVMLELERP--LTESQIQVVCKQTLDALNYLH---DNKIIHRD 133
Query: 451 IKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLSD----- 505
+K+ NIL + K+ADFG+S + GTP ++ P+ D
Sbjct: 134 LKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDY 193
Query: 506 KSDVYSFGVVLIEIITALKVVDFSRPHSEVN 536
K+DV+S G+ LIE+ + PH E+N
Sbjct: 194 KADVWSLGITLIEM------AEIEPPHHELN 218
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 93/202 (46%), Gaps = 10/202 (4%)
Query: 320 EKATSFFSEKHRLGTGAYGTVYAGKLHND--DWVAIKRFRYRDTDSIDQVMNEIKLLSSV 377
++ F +LG G+YG+VY +H + VAIK+ + +++ EI ++
Sbjct: 25 KQPEEVFDVLEKLGEGSYGSVYKA-IHKETGQIVAIKQVPVES--DLQEIIKEISIMQQC 81
Query: 378 SHPNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXY 437
P++++ G + + +V E+ G++ + R R L Y
Sbjct: 82 DSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDII-RLRNKTLTEDEIATILQSTLKGLEY 140
Query: 438 LHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQY 497
LH HRDIK+ NILL+ +K+ADFG++ +T+ GTP ++ P+
Sbjct: 141 LHFMRK---IHRDIKAGNILLNTEGHAKLADFGVAG-QLTDXMAKRNXVIGTPFWMAPEV 196
Query: 498 HQYFHLSDKSDVYSFGVVLIEI 519
Q + +D++S G+ IE+
Sbjct: 197 IQEIGYNCVADIWSLGITAIEM 218
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 101/224 (45%), Gaps = 17/224 (7%)
Query: 307 GNSSVPFYPYKEIEKATSFFSEKHRLGTGAYGTVYAGKLHNDDW-----VAIKRFRYRDT 361
G+ P I K T F K LG+GA+GTVY G + VAIK R +
Sbjct: 1 GSGEAPNQALLRILKETEFKKIK-VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS 59
Query: 362 DSID-QVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLP 420
+ ++++E +++SV +P++ RLLG C+ L+ + MP G L ++ RE +
Sbjct: 60 PKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYV-REHKDNIG 117
Query: 421 WXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESS 480
YL + HRD+ + N+L+ K+ DFG ++L E
Sbjct: 118 SQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEK 174
Query: 481 HISTAPQGTP---GYLDPQYHQYFHLSDKSDVYSFGVVLIEIIT 521
P L+ H+ + + +SDV+S+GV + E++T
Sbjct: 175 EYHAEGGKVPIKWMALESILHRIY--THQSDVWSYGVTVWELMT 216
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 101/224 (45%), Gaps = 17/224 (7%)
Query: 307 GNSSVPFYPYKEIEKATSFFSEKHRLGTGAYGTVYAGKLHNDDW-----VAIKRFRYRDT 361
G+ P I K T F K LG+GA+GTVY G + VAIK R +
Sbjct: 1 GSGEAPNQALLRILKETEFKKIK-VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS 59
Query: 362 DSID-QVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLP 420
+ ++++E +++SV +P++ RLLG C+ L+ + MP G L ++ RE +
Sbjct: 60 PKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYV-REHKDNIG 117
Query: 421 WXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESS 480
YL + HRD+ + N+L+ K+ DFG ++L E
Sbjct: 118 SQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEK 174
Query: 481 HISTAPQGTP---GYLDPQYHQYFHLSDKSDVYSFGVVLIEIIT 521
P L+ H+ + + +SDV+S+GV + E++T
Sbjct: 175 EYHAEGGKVPIKWMALESILHRIY--THQSDVWSYGVTVWELMT 216
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 94/207 (45%), Gaps = 17/207 (8%)
Query: 332 LGTGAYGTVYAGKLHNDD------WVAIKRFRYRDTDSIDQ-VMNEIKLLSSVSHP-NLL 383
LG GA+G V D VA+K + T S + +M+E+K+L + H N++
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 384 RLLGCCIEEGEPILVY-EFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXY----- 437
LLG C + G P++V EF G L +L+ +R +P+ Y
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQVA 154
Query: 438 --LHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTP-GYLD 494
+ + HRD+ + NILL K+ DFGL+R + ++ P ++
Sbjct: 155 KGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMA 214
Query: 495 PQYHQYFHLSDKSDVYSFGVVLIEIIT 521
P+ + +SDV+SFGV+L EI +
Sbjct: 215 PETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 79/164 (48%), Gaps = 15/164 (9%)
Query: 322 ATSFFSEKHRLGTGAYGTVYAGK-LHNDDWVAIKRFRYRDTD-----SIDQVMNEIKLLS 375
ATS + +G GAYGTVY + H+ +VA+K R + + S + + ++ L
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 376 SVSHPNLLRLLGCCI-----EEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXX 430
+ HPN++RL+ C E + LV+E + + L +L + GLP
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQ 120
Query: 431 XXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRL 474
+LH+ I HRD+K NIL+ K+ADFGL+R+
Sbjct: 121 FLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARI 161
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 79/164 (48%), Gaps = 15/164 (9%)
Query: 322 ATSFFSEKHRLGTGAYGTVYAGK-LHNDDWVAIKRFRYRDTD-----SIDQVMNEIKLLS 375
ATS + +G GAYGTVY + H+ +VA+K R + + S + + ++ L
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 376 SVSHPNLLRLLGCCI-----EEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXX 430
+ HPN++RL+ C E + LV+E + + L +L + GLP
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQ 120
Query: 431 XXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRL 474
+LH+ I HRD+K NIL+ K+ADFGL+R+
Sbjct: 121 FLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARI 161
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 73/148 (49%), Gaps = 11/148 (7%)
Query: 332 LGTGAYGTVYAGKLHN-DDWVAIKRF----RYRDTDSIDQV-MNEIKLLSSVSHPNLLRL 385
LG G + TVY + N + VAIK+ R D I++ + EIKLL +SHPN++ L
Sbjct: 18 LGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGL 77
Query: 386 LGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPP 445
L + LV++FM T + + ++ L YLH
Sbjct: 78 LDAFGHKSNISLVFDFME--TDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHW--- 132
Query: 446 IYHRDIKSSNILLDYNYRSKVADFGLSR 473
I HRD+K +N+LLD N K+ADFGL++
Sbjct: 133 ILHRDLKPNNLLLDENGVLKLADFGLAK 160
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 97/199 (48%), Gaps = 17/199 (8%)
Query: 332 LGTGAYGTVYAG-----KLHNDDWVAIKRFRYRDTDSID--QVMNEIKLLSSVSHPNLLR 384
LG G +G+V G K D VAIK + + T+ D ++M E +++ + +P ++R
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQID--VAIKVLK-QGTEKADTEEMMREAQIMHQLDNPYIVR 74
Query: 385 LLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNP 444
L+G C E +LV E G L + L +R +P YL
Sbjct: 75 LIGVCQAEA-LMLVMEMAGGGPLHKFLVGKREE-IPVSNVAELLHQVSMGMKYLEEK--- 129
Query: 445 PIYHRDIKSSNILLDYNYRSKVADFGLSR-LGMTESSHISTAPQGTP-GYLDPQYHQYFH 502
HRD+ + N+LL + +K++DFGLS+ LG +S + + + P + P+ +
Sbjct: 130 NFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRK 189
Query: 503 LSDKSDVYSFGVVLIEIIT 521
S +SDV+S+GV + E ++
Sbjct: 190 FSSRSDVWSYGVTMWEALS 208
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 101/224 (45%), Gaps = 17/224 (7%)
Query: 307 GNSSVPFYPYKEIEKATSFFSEKHRLGTGAYGTVYAGKLHNDDW-----VAIKRFRYRDT 361
G+ P I K T F K LG+GA+GTVY G + VAIK R +
Sbjct: 1 GSGEAPNQALLRILKETEFKKIK-VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS 59
Query: 362 DSID-QVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLP 420
+ ++++E +++SV +P++ RLLG C+ L+ + MP G L ++ RE +
Sbjct: 60 PKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYV-REHKDNIG 117
Query: 421 WXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESS 480
YL + HRD+ + N+L+ K+ DFG ++L E
Sbjct: 118 SQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEK 174
Query: 481 HISTAPQGTP---GYLDPQYHQYFHLSDKSDVYSFGVVLIEIIT 521
P L+ H+ + + +SDV+S+GV + E++T
Sbjct: 175 EYHAEGGKVPIKWMALESILHRIY--THQSDVWSYGVTVWELMT 216
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/306 (23%), Positives = 131/306 (42%), Gaps = 38/306 (12%)
Query: 307 GNSSVPFYPYKEIEKATS-FFSEKHR-----LGTGAYGTVYAGKLHNDDW-----VAIKR 355
G S P P ++ K + F E LG+G +GTV+ G + V IK
Sbjct: 8 GESIEPLDPSEKANKVLARIFKETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKV 67
Query: 356 FRYRD-TDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPI-LVYEFMPNGTLCQHLQR 413
+ S V + + + S+ H +++RLLG C G + LV +++P G+L H+++
Sbjct: 68 IEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLC--PGSSLQLVTQYLPLGSLLDHVRQ 125
Query: 414 ERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSR 473
RG+ P M HR++ + N+LL + +VADFG++
Sbjct: 126 HRGALGPQLLLNWGVQIAKGMYYLEEHGM----VHRNLAARNVLLKSPSQVQVADFGVAD 181
Query: 474 LGMTESSHISTAPQGTP-GYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPH 532
L + + + TP ++ + + + +SDV+S+GV + E++T + P+
Sbjct: 182 LLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTF-----GAEPY 236
Query: 533 SEVNLAALAIDRIGRGCVDEIIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMM 592
+ + LA E+ D + R A +V + +C ++RPT
Sbjct: 237 AGLRLA-------------EVPDLLEKGERLAQPQICTIDVYMVMVKCWMIDENIRPTFK 283
Query: 593 EVAEEL 598
E+A E
Sbjct: 284 ELANEF 289
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 99/216 (45%), Gaps = 30/216 (13%)
Query: 332 LGTGAYGTVYAGKLHNDD--------WVAIKRFRYRDTDS-IDQVMNEIKLLSSV-SHPN 381
LG GA+G V + D VA+K + T+ + +++E++++ + H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKN 102
Query: 382 LLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHS- 440
++ LLG C ++G ++ E+ G L ++L+ R G+ + L S
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 441 ----------AMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTP 490
+ HRD+ + N+L+ N K+ADFGL+R + ++I + T
Sbjct: 163 TYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR----DINNIDYYKKTTN 218
Query: 491 GYLDPQYHQYFHLSDK-----SDVYSFGVVLIEIIT 521
G L ++ L D+ SDV+SFGV++ EI T
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 99/216 (45%), Gaps = 30/216 (13%)
Query: 332 LGTGAYGTVYAGKLHNDD--------WVAIKRFRYRDTDS-IDQVMNEIKLLSSV-SHPN 381
LG GA+G V + D VA+K + T+ + +++E++++ + H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 382 LLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHS- 440
++ LLG C ++G ++ E+ G L ++L+ R G+ + L S
Sbjct: 103 IIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 441 ----------AMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTP 490
+ HRD+ + N+L+ N K+ADFGL+R + ++I + T
Sbjct: 163 TYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR----DINNIDYYKKTTN 218
Query: 491 GYLDPQYHQYFHLSDK-----SDVYSFGVVLIEIIT 521
G L ++ L D+ SDV+SFGV++ EI T
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 99/216 (45%), Gaps = 30/216 (13%)
Query: 332 LGTGAYGTVYAGKLHNDD--------WVAIKRFRYRDTDS-IDQVMNEIKLLSSV-SHPN 381
LG GA+G V + D VA+K + T+ + +++E++++ + H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 382 LLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHS- 440
++ LLG C ++G ++ E+ G L ++L+ R G+ + L S
Sbjct: 103 IITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 441 ----------AMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTP 490
+ HRD+ + N+L+ N K+ADFGL+R + ++I + T
Sbjct: 163 TYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR----DINNIDYYKKTTN 218
Query: 491 GYLDPQYHQYFHLSDK-----SDVYSFGVVLIEIIT 521
G L ++ L D+ SDV+SFGV++ EI T
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 97/204 (47%), Gaps = 17/204 (8%)
Query: 326 FSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYRDTDS---IDQVMNEIKLLSSVSHPN 381
F + ++G G YG VY + + VA+K+ R DT++ + EI LL ++HPN
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL-DTETEGVPSTAIREISLLKELNHPN 66
Query: 382 LLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSA 441
+++LL E + LV+E + + L + + +G+P + HS
Sbjct: 67 IVKLLDVIHTENKLYLVFEHV-DQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 125
Query: 442 MNPPIYHRDIKSSNILLDYNYRSKVADFGLSR-LGMTESSHISTAPQGTPGYLDPQYH-- 498
+ HRD+K N+L++ K+ADFGL+R G+ ++ T Y P+
Sbjct: 126 R---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV--VTLWYRAPEILLG 180
Query: 499 -QYFHLSDKSDVYSFGVVLIEIIT 521
+Y+ S D++S G + E++T
Sbjct: 181 CKYY--STAVDIWSLGCIFAEMVT 202
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 96/204 (47%), Gaps = 13/204 (6%)
Query: 325 FFSEKHRLGTGAYGTVYAGKLHNDDWVAIKRFRYRDTDSI--DQVMNEIKLLSSVSHPNL 382
F K +LG+GA+G V+ + + + + +D + +Q+ EI++L S+ HPN+
Sbjct: 23 LFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNI 82
Query: 383 LRLLGCCIEEGEPILVYEFMPNGTLCQHL--QRERGSGLPWXXXXXXXXXXXXXXXYLHS 440
+++ + +V E G L + + + RG L Y HS
Sbjct: 83 IKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHS 142
Query: 441 AMNPPIYHRDIKSSNILL-DYNYRS--KVADFGLSRLGMTESSHISTAPQGTPGYLDPQY 497
+ H+D+K NIL D + S K+ DFGL+ L +S ST GT Y+ P+
Sbjct: 143 QH---VVHKDLKPENILFQDTSPHSPIKIIDFGLAEL--FKSDEHSTNAAGTALYMAPEV 197
Query: 498 HQYFHLSDKSDVYSFGVVLIEIIT 521
+ ++ K D++S GVV+ ++T
Sbjct: 198 FKR-DVTFKCDIWSAGVVMYFLLT 220
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 94/201 (46%), Gaps = 17/201 (8%)
Query: 332 LGTGAYGTVYAGKL----HNDDWVAIKRF-RYRDTDSIDQVMNEIKLLSSVSHPNLLRLL 386
+G G +G VY G+ N AIK R + ++ + E L+ ++HPN+L L+
Sbjct: 29 IGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALI 88
Query: 387 GCCIE-EGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPP 445
G + EG P ++ +M +G L Q ++ + + +
Sbjct: 89 GIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRN----PTVKDLISFGLQVARGMEYLAEQK 144
Query: 446 IYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYH-----QY 500
HRD+ + N +LD ++ KVADFGL+R + + + S Q L ++ Q
Sbjct: 145 FVHRDLAARNCMLDESFTVKVADFGLAR-DILDREYYSVQ-QHRHARLPVKWTALESLQT 202
Query: 501 FHLSDKSDVYSFGVVLIEIIT 521
+ + KSDV+SFGV+L E++T
Sbjct: 203 YRFTTKSDVWSFGVLLWELLT 223
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 88/196 (44%), Gaps = 9/196 (4%)
Query: 326 FSEKHRLGTGAYGTVYAGKLHNDDWVAIKRFRYRDTDSI--DQVMNEIKLLSSVSHPNLL 383
F + LG G G V+ V ++ + + +Q++ E+++L + P ++
Sbjct: 11 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 70
Query: 384 RLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMN 443
G +GE + E M G+L Q L++ +P YL
Sbjct: 71 GFYGAFYSDGEISICMEHMDGGSLDQVLKK--AGRIPEQILGKVSIAVIKGLTYLREKHK 128
Query: 444 PPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHL 503
I HRD+K SNIL++ K+ DFG+S + E ++ GT Y+ P+ Q H
Sbjct: 129 --IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDE---MANEFVGTRSYMSPERLQGTHY 183
Query: 504 SDKSDVYSFGVVLIEI 519
S +SD++S G+ L+E+
Sbjct: 184 SVQSDIWSMGLSLVEM 199
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 88/204 (43%), Gaps = 17/204 (8%)
Query: 326 FSEKHRLGTGAYGTVYAGKLHNDDWVAIKRFRYRDTDS--IDQVMNEIKLLSSVSHPNLL 383
+ + ++G G YG VY K VA+KR R D + EI LL + HPN++
Sbjct: 23 YQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIV 82
Query: 384 RLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMN 443
L+ E LV+EFM + + E +GL + H
Sbjct: 83 SLIDVIHSERCLTLVFEFMEKD--LKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHR- 139
Query: 444 PPIYHRDIKSSNILLDYNYRSKVADFGLSR-LGMTESSHISTAPQGTPGYLDPQY----H 498
I HRD+K N+L++ + K+ADFGL+R G+ S+ T T Y P
Sbjct: 140 --ILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSY--THEVVTLWYRAPDVLMGSK 195
Query: 499 QYFHLSDKSDVYSFGVVLIEIITA 522
+Y S D++S G + E+IT
Sbjct: 196 KY---STSVDIWSIGCIFAEMITG 216
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 98/216 (45%), Gaps = 30/216 (13%)
Query: 332 LGTGAYGTVYAGKLHNDD--------WVAIKRFRYRDTDS-IDQVMNEIKLLSSV-SHPN 381
LG GA+G V + D VA+K + T+ + +++E++++ + H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 382 LLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHS- 440
++ LLG C ++G ++ E+ G L ++L+ R G+ L S
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVSC 162
Query: 441 ----------AMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTP 490
+ HRD+ + N+L+ N K+ADFGL+R + ++I + T
Sbjct: 163 TYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR----DINNIDXXKKTTN 218
Query: 491 GYLDPQYHQYFHLSDK-----SDVYSFGVVLIEIIT 521
G L ++ L D+ SDV+SFGV++ EI T
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 89/205 (43%), Gaps = 22/205 (10%)
Query: 330 HRLGTGAYGTVYAGKLHNDDWVAI-KRFRYRDTDSIDQVM--NEIKLLSSVSHPNLLRLL 386
+ +GTG+YG + +D + + K Y ++ M +E+ LL + HPN++R
Sbjct: 12 YTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYY 71
Query: 387 GCCIEEGEPIL--VYEFMPNGTLC----------QHLQRERGSGLPWXXXXXXXXXXXXX 434
I+ L V E+ G L Q+L E +
Sbjct: 72 DRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEE------FVLRVMTQLTLALK 125
Query: 435 XXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLD 494
+ S + HRD+K +N+ LD K+ DFGL+R+ + + + A GTP Y+
Sbjct: 126 ECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARI-LNHDTSFAKAFVGTPYYMS 184
Query: 495 PQYHQYFHLSDKSDVYSFGVVLIEI 519
P+ ++KSD++S G +L E+
Sbjct: 185 PEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 95/205 (46%), Gaps = 16/205 (7%)
Query: 326 FSEKHRLGTGAYGTVYAGKLHNDDW-----VAIKRFRYRDTDSID-QVMNEIKLLSSVSH 379
F + L +GA+GTVY G + VAIK R + + ++++E +++SV +
Sbjct: 24 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 380 PNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLH 439
P++ RLLG C+ L+ + MP G L ++ RE + YL
Sbjct: 84 PHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYLE 141
Query: 440 SAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTP---GYLDPQ 496
+ HRD+ + N+L+ K+ DFGL++L E P L+
Sbjct: 142 DRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 198
Query: 497 YHQYFHLSDKSDVYSFGVVLIEIIT 521
H+ + + +SDV+S+GV + E++T
Sbjct: 199 LHRIY--THQSDVWSYGVTVWELMT 221
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 88/204 (43%), Gaps = 17/204 (8%)
Query: 326 FSEKHRLGTGAYGTVYAGKLHNDDWVAIKRFRYRDTDS--IDQVMNEIKLLSSVSHPNLL 383
+ + ++G G YG VY K VA+KR R D + EI LL + HPN++
Sbjct: 23 YQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIV 82
Query: 384 RLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMN 443
L+ E LV+EFM + + E +GL + H
Sbjct: 83 SLIDVIHSERCLTLVFEFMEKD--LKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHR- 139
Query: 444 PPIYHRDIKSSNILLDYNYRSKVADFGLSR-LGMTESSHISTAPQGTPGYLDPQY----H 498
I HRD+K N+L++ + K+ADFGL+R G+ S+ T T Y P
Sbjct: 140 --ILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSY--THEVVTLWYRAPDVLMGSK 195
Query: 499 QYFHLSDKSDVYSFGVVLIEIITA 522
+Y S D++S G + E+IT
Sbjct: 196 KY---STSVDIWSIGCIFAEMITG 216
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 121/275 (44%), Gaps = 32/275 (11%)
Query: 332 LGTGAYGTVYAGKLHNDDW-----VAIKRFRYRD-TDSIDQVMNEIKLLSSVSHPNLLRL 385
LG+G +GTV+ G + V IK + S V + + + S+ H +++RL
Sbjct: 21 LGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRL 80
Query: 386 LGCCIEEGEPI-LVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNP 444
LG C G + LV +++P G+L H+++ RG+ P M
Sbjct: 81 LGLC--PGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHGM-- 136
Query: 445 PIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTP-GYLDPQYHQYFHL 503
HR++ + N+LL + +VADFG++ L + + + TP ++ + +
Sbjct: 137 --VHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKY 194
Query: 504 SDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLEPHRD 563
+ +SDV+S+GV + E++T + P++ + LA E+ D + R
Sbjct: 195 THQSDVWSYGVTVWELMTF-----GAEPYAGLRLA-------------EVPDLLEKGERL 236
Query: 564 AWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEEL 598
A +V + +C ++RPT E+A E
Sbjct: 237 AQPQICTIDVYMVMVKCWMIDENIRPTFKELANEF 271
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 98/216 (45%), Gaps = 30/216 (13%)
Query: 332 LGTGAYGTVYAGKLHNDD--------WVAIKRFRYRDTDS-IDQVMNEIKLLSSV-SHPN 381
LG GA+G V + D VA+K + T+ + +++E++++ + H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 382 LLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHS- 440
++ LLG C ++G ++ E+ G L ++L+ R G+ + L S
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 441 ----------AMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTP 490
+ HRD+ + N+L+ N K+ADFGL+R + ++I T
Sbjct: 163 TYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR----DINNIDYYKNTTN 218
Query: 491 GYLDPQYHQYFHLSDK-----SDVYSFGVVLIEIIT 521
G L ++ L D+ SDV+SFGV++ EI T
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 95/205 (46%), Gaps = 16/205 (7%)
Query: 326 FSEKHRLGTGAYGTVYAGKLHNDDW-----VAIKRFRYRDTDSID-QVMNEIKLLSSVSH 379
F + LG+GA+GTVY G + VAIK R + + ++++E +++SV +
Sbjct: 21 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 80
Query: 380 PNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLH 439
P++ RLLG C+ L+ + MP G L ++ RE + YL
Sbjct: 81 PHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYLE 138
Query: 440 SAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTP---GYLDPQ 496
+ HRD+ + N+L+ K+ DFG ++L E P L+
Sbjct: 139 DRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESI 195
Query: 497 YHQYFHLSDKSDVYSFGVVLIEIIT 521
H+ + + +SDV+S+GV + E++T
Sbjct: 196 LHRIY--THQSDVWSYGVTVWELMT 218
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 89/196 (45%), Gaps = 9/196 (4%)
Query: 326 FSEKHRLGTGAYGTVYAGKLHNDDWVAIKRFRYRDTDSI--DQVMNEIKLLSSVSHPNLL 383
F + LG G G V+ V ++ + + +Q++ E+++L + P ++
Sbjct: 70 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 129
Query: 384 RLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMN 443
G +GE + E M G+L Q L++ +P YL
Sbjct: 130 GFYGAFYSDGEISICMEHMDGGSLDQVLKK--AGRIPEQILGKVSIAVIKGLTYLREKHK 187
Query: 444 PPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHL 503
I HRD+K SNIL++ K+ DFG+S G S ++ + GT Y+ P+ Q H
Sbjct: 188 --IMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS-MANSFVGTRSYMSPERLQGTHY 242
Query: 504 SDKSDVYSFGVVLIEI 519
S +SD++S G+ L+E+
Sbjct: 243 SVQSDIWSMGLSLVEM 258
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 77/167 (46%), Gaps = 18/167 (10%)
Query: 322 ATSFFSEKHRLGTGAYGTVYAGK-LHNDDWVAIKRFRYRDTDSIDQVM-----NEIKLL- 374
ATS + +G GAYGTVY + H+ +VA+K R + + E+ LL
Sbjct: 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLR 66
Query: 375 --SSVSHPNLLRLLGCCI-----EEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXX 427
+ HPN++RL+ C E + LV+E + + L +L + GLP
Sbjct: 67 RLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDL 125
Query: 428 XXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRL 474
+LH+ I HRD+K NIL+ K+ADFGL+R+
Sbjct: 126 MRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARI 169
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 95/205 (46%), Gaps = 16/205 (7%)
Query: 326 FSEKHRLGTGAYGTVYAGKLHNDDW-----VAIKRFRYRDTDSID-QVMNEIKLLSSVSH 379
F + LG+GA+GTVY G + VAIK R + + ++++E +++SV +
Sbjct: 24 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 380 PNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLH 439
P++ RLLG C+ L+ + MP G L ++ RE + YL
Sbjct: 84 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYLE 141
Query: 440 SAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTP---GYLDPQ 496
+ HRD+ + N+L+ K+ DFG ++L E P L+
Sbjct: 142 DRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESI 198
Query: 497 YHQYFHLSDKSDVYSFGVVLIEIIT 521
H+ + + +SDV+S+GV + E++T
Sbjct: 199 LHRIY--THQSDVWSYGVTVWELMT 221
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 92/214 (42%), Gaps = 30/214 (14%)
Query: 326 FSEKHRLGTGAYGTVYAGKLHND-DWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLR 384
F E +G+G +G V+ K D IKR +Y + ++ E+K L+ + H N++
Sbjct: 13 FKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVH 68
Query: 385 LLGCCIEEG---EP---------------ILVYEFMPNGTLCQHLQRERGSGLPWXXXXX 426
GC +G +P + EF GTL Q +++ RG L
Sbjct: 69 YNGCW--DGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALE 126
Query: 427 XXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAP 486
Y+HS + +RD+K SNI L + K+ DFGL + ++
Sbjct: 127 LFEQITKGVDYIHS---KKLINRDLKPSNIFLVDTKQVKIGDFGL--VTSLKNDGKRXRS 181
Query: 487 QGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEII 520
+GT Y+ P+ + D+Y+ G++L E++
Sbjct: 182 KGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 215
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 94/211 (44%), Gaps = 21/211 (9%)
Query: 332 LGTGAYGTVYAGKLHNDD------WVAIKRFRYRDTDSIDQ-VMNEIKLLSSVSHP-NLL 383
LG GA+G V D VA+K + T S + +M+E+K+L + H N++
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 384 RLLGCCIEEGEPILVY-EFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYL---- 438
LLG C + G P++V EF G L +L+ +R +P+ +L
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 439 -------HSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTP- 490
+ HRD+ + NILL K+ DFGL+R + ++ P
Sbjct: 146 FQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 205
Query: 491 GYLDPQYHQYFHLSDKSDVYSFGVVLIEIIT 521
++ P+ + +SDV+SFGV+L EI +
Sbjct: 206 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 95/205 (46%), Gaps = 16/205 (7%)
Query: 326 FSEKHRLGTGAYGTVYAGKLHNDDW-----VAIKRFRYRDTDSID-QVMNEIKLLSSVSH 379
F + L +GA+GTVY G + VAIK R + + ++++E +++SV +
Sbjct: 24 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 380 PNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLH 439
P++ RLLG C+ L+ + MP G L ++ RE + YL
Sbjct: 84 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYLE 141
Query: 440 SAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTP---GYLDPQ 496
+ HRD+ + N+L+ K+ DFGL++L E P L+
Sbjct: 142 DRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 198
Query: 497 YHQYFHLSDKSDVYSFGVVLIEIIT 521
H+ + + +SDV+S+GV + E++T
Sbjct: 199 LHRIY--THQSDVWSYGVTVWELMT 221
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 97/204 (47%), Gaps = 17/204 (8%)
Query: 326 FSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYRDTDS---IDQVMNEIKLLSSVSHPN 381
F + ++G G YG VY + + VA+K+ R DT++ + EI LL ++HPN
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL-DTETEGVPSTAIREISLLKELNHPN 62
Query: 382 LLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSA 441
+++LL E + LV+E + + L + +G+P + HS
Sbjct: 63 IVKLLDVIHTENKLYLVFEHV-HQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 442 MNPPIYHRDIKSSNILLDYNYRSKVADFGLSR-LGMTESSHISTAPQGTPGYLDPQYH-- 498
+ HRD+K N+L++ K+ADFGL+R G+ ++ T T Y P+
Sbjct: 122 R---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWYRAPEILLG 176
Query: 499 -QYFHLSDKSDVYSFGVVLIEIIT 521
+Y+ S D++S G + E++T
Sbjct: 177 CKYY--STAVDIWSLGCIFAEMVT 198
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 92/225 (40%), Gaps = 39/225 (17%)
Query: 326 FSEKHRLGTGAYGTVYAGKLHND-DWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLR 384
F E +G+G +G V+ K D I+R +Y + ++ E+K L+ + H N++
Sbjct: 14 FKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNN----EKAEREVKALAKLDHVNIVH 69
Query: 385 LLGC-------------CIEEGE----------------PILVYEFMPNGTLCQHLQRER 415
GC +E + + EF GTL Q +++ R
Sbjct: 70 YNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRR 129
Query: 416 GSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLG 475
G L Y+HS + HRD+K SNI L + K+ DFGL +
Sbjct: 130 GEKLDKVLALELFEQITKGVDYIHSK---KLIHRDLKPSNIFLVDTKQVKIGDFGL--VT 184
Query: 476 MTESSHISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEII 520
++ T +GT Y+ P+ + D+Y+ G++L E++
Sbjct: 185 SLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 229
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 95/205 (46%), Gaps = 16/205 (7%)
Query: 326 FSEKHRLGTGAYGTVYAGKLHNDDW-----VAIKRFRYRDTDSID-QVMNEIKLLSSVSH 379
F + L +GA+GTVY G + VAIK R + + ++++E +++SV +
Sbjct: 17 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 380 PNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLH 439
P++ RLLG C+ L+ + MP G L ++ RE + YL
Sbjct: 77 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYLE 134
Query: 440 SAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTP---GYLDPQ 496
+ HRD+ + N+L+ K+ DFGL++L E P L+
Sbjct: 135 DRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 191
Query: 497 YHQYFHLSDKSDVYSFGVVLIEIIT 521
H+ + + +SDV+S+GV + E++T
Sbjct: 192 LHRIY--THQSDVWSYGVTVWELMT 214
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 99/216 (45%), Gaps = 30/216 (13%)
Query: 332 LGTGAYGTVYAGKLHNDD--------WVAIKRFRYRDTDS-IDQVMNEIKLLSSV-SHPN 381
LG GA+G V + D VA+K + T+ + +++E++++ + H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 382 LLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHS- 440
++ LLG C ++G ++ E+ G L ++L+ R G+ + L S
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 441 ----------AMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTP 490
+ HRD+ + N+L+ N ++ADFGL+R + ++I + T
Sbjct: 163 TYQLARGMEYLASQKCIHRDLAARNVLVTENNVMRIADFGLAR----DINNIDYYKKTTN 218
Query: 491 GYLDPQYHQYFHLSDK-----SDVYSFGVVLIEIIT 521
G L ++ L D+ SDV+SFGV++ EI T
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 95/205 (46%), Gaps = 16/205 (7%)
Query: 326 FSEKHRLGTGAYGTVYAGKLHNDDW-----VAIKRFRYRDTDSID-QVMNEIKLLSSVSH 379
F + LG+GA+GTVY G + VAIK R + + ++++E +++SV +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 380 PNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLH 439
P++ RLLG C+ L+ + MP G L ++ RE + YL
Sbjct: 77 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYLE 134
Query: 440 SAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTP---GYLDPQ 496
+ HRD+ + N+L+ K+ DFG ++L E P L+
Sbjct: 135 DRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESI 191
Query: 497 YHQYFHLSDKSDVYSFGVVLIEIIT 521
H+ + + +SDV+S+GV + E++T
Sbjct: 192 LHRIY--THQSDVWSYGVTVWELMT 214
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 85/194 (43%), Gaps = 12/194 (6%)
Query: 332 LGTGAYGTVYAGKLH-NDDWVAIK---RFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLG 387
LG G +G V GK VA+K R + R D + ++ EI+ L HP++++L
Sbjct: 24 LGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQ 83
Query: 388 CCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIY 447
+ +V E++ G L ++ + L Y H M +
Sbjct: 84 VISTPSDIFMVMEYVSGGELFDYICK--NGRLDEKESRRLFQQILSGVDYCHRHM---VV 138
Query: 448 HRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQ-YFHLSDK 506
HRD+K N+LLD + +K+ADFGLS M G+P Y P+ + +
Sbjct: 139 HRDLKPENVLLDAHMNAKIADFGLS--NMMSDGEFLRXSCGSPNYAAPEVISGRLYAGPE 196
Query: 507 SDVYSFGVVLIEII 520
D++S GV+L ++
Sbjct: 197 VDIWSSGVILYALL 210
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 89/196 (45%), Gaps = 9/196 (4%)
Query: 326 FSEKHRLGTGAYGTVYAGKLHNDDWVAIKRFRYRDTDSI--DQVMNEIKLLSSVSHPNLL 383
F + LG G G V+ V ++ + + +Q++ E+++L + P ++
Sbjct: 35 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 94
Query: 384 RLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMN 443
G +GE + E M G+L Q L++ +P YL
Sbjct: 95 GFYGAFYSDGEISICMEHMDGGSLDQVLKK--AGRIPEQILGKVSIAVIKGLTYLREKHK 152
Query: 444 PPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHL 503
I HRD+K SNIL++ K+ DFG+S G S ++ + GT Y+ P+ Q H
Sbjct: 153 --IMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS-MANSFVGTRSYMSPERLQGTHY 207
Query: 504 SDKSDVYSFGVVLIEI 519
S +SD++S G+ L+E+
Sbjct: 208 SVQSDIWSMGLSLVEM 223
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 92/198 (46%), Gaps = 20/198 (10%)
Query: 332 LGTGAYGTVYAGKLH-NDDWVAIK---RFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLG 387
LG G +G V G+ VA+K R + R D + ++ EI+ L HP++++L
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQ 78
Query: 388 CCIEEGEPILVYEFMPNGTL----CQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMN 443
+ +V E++ G L C+H + E Y H M
Sbjct: 79 VISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEA------RRLFQQILSAVDYCHRHM- 131
Query: 444 PPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQY-HQYFH 502
+ HRD+K N+LLD + +K+ADFGLS + M++ + T+ G+P Y P+ +
Sbjct: 132 --VVHRDLKPENVLLDAHMNAKIADFGLSNM-MSDGEFLRTSC-GSPNYAAPEVISGRLY 187
Query: 503 LSDKSDVYSFGVVLIEII 520
+ D++S GV+L ++
Sbjct: 188 AGPEVDIWSCGVILYALL 205
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 94/211 (44%), Gaps = 21/211 (9%)
Query: 332 LGTGAYGTVYAGKLHNDD------WVAIKRFRYRDTDSIDQ-VMNEIKLLSSVSHP-NLL 383
LG GA+G V D VA+K + T S + +M+E+K+L + H N++
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 384 RLLGCCIEEGEPILVY-EFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYL---- 438
LLG C + G P++V EF G L +L+ +R +P+ +L
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 439 -------HSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTP- 490
+ HRD+ + NILL K+ DFGL+R + ++ P
Sbjct: 146 FQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 205
Query: 491 GYLDPQYHQYFHLSDKSDVYSFGVVLIEIIT 521
++ P+ + +SDV+SFGV+L EI +
Sbjct: 206 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 89/196 (45%), Gaps = 9/196 (4%)
Query: 326 FSEKHRLGTGAYGTVYAGKLHNDDWVAIKRFRYRDTDSI--DQVMNEIKLLSSVSHPNLL 383
F + LG G G V+ V ++ + + +Q++ E+++L + P ++
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 67
Query: 384 RLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMN 443
G +GE + E M G+L Q L++ +P YL
Sbjct: 68 GFYGAFYSDGEISICMEHMDGGSLDQVLKK--AGRIPEQILGKVSIAVIKGLTYLREKHK 125
Query: 444 PPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHL 503
I HRD+K SNIL++ K+ DFG+S G S ++ + GT Y+ P+ Q H
Sbjct: 126 --IMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS-MANSFVGTRSYMSPERLQGTHY 180
Query: 504 SDKSDVYSFGVVLIEI 519
S +SD++S G+ L+E+
Sbjct: 181 SVQSDIWSMGLSLVEM 196
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 89/196 (45%), Gaps = 9/196 (4%)
Query: 326 FSEKHRLGTGAYGTVYAGKLHNDDWVAIKRFRYRDTDSI--DQVMNEIKLLSSVSHPNLL 383
F + LG G G V+ V ++ + + +Q++ E+++L + P ++
Sbjct: 27 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 86
Query: 384 RLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMN 443
G +GE + E M G+L Q L++ +P YL
Sbjct: 87 GFYGAFYSDGEISICMEHMDGGSLDQVLKK--AGRIPEQILGKVSIAVIKGLTYLREKHK 144
Query: 444 PPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHL 503
I HRD+K SNIL++ K+ DFG+S G S ++ + GT Y+ P+ Q H
Sbjct: 145 --IMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS-MANSFVGTRSYMSPERLQGTHY 199
Query: 504 SDKSDVYSFGVVLIEI 519
S +SD++S G+ L+E+
Sbjct: 200 SVQSDIWSMGLSLVEM 215
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 94/211 (44%), Gaps = 21/211 (9%)
Query: 332 LGTGAYGTVYAGKLHNDD------WVAIKRFRYRDTDSIDQ-VMNEIKLLSSVSHP-NLL 383
LG GA+G V D VA+K + T S + +M+E+K+L + H N++
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 384 RLLGCCIEEGEPILV-YEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYL---- 438
LLG C + G P++V EF G L +L+ +R +P+ +L
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYS 156
Query: 439 -------HSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTP- 490
+ HRD+ + NILL K+ DFGL+R + ++ P
Sbjct: 157 FQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 216
Query: 491 GYLDPQYHQYFHLSDKSDVYSFGVVLIEIIT 521
++ P+ + +SDV+SFGV+L EI +
Sbjct: 217 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 247
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 89/196 (45%), Gaps = 9/196 (4%)
Query: 326 FSEKHRLGTGAYGTVYAGKLHNDDWVAIKRFRYRDTDSI--DQVMNEIKLLSSVSHPNLL 383
F + LG G G V+ V ++ + + +Q++ E+++L + P ++
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 67
Query: 384 RLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMN 443
G +GE + E M G+L Q L++ +P YL
Sbjct: 68 GFYGAFYSDGEISICMEHMDGGSLDQVLKK--AGRIPEQILGKVSIAVIKGLTYLREKHK 125
Query: 444 PPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHL 503
I HRD+K SNIL++ K+ DFG+S G S ++ + GT Y+ P+ Q H
Sbjct: 126 --IMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS-MANSFVGTRSYMSPERLQGTHY 180
Query: 504 SDKSDVYSFGVVLIEI 519
S +SD++S G+ L+E+
Sbjct: 181 SVQSDIWSMGLSLVEM 196
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 94/211 (44%), Gaps = 21/211 (9%)
Query: 332 LGTGAYGTVYAGKLHNDD------WVAIKRFRYRDTDSIDQ-VMNEIKLLSSVSHP-NLL 383
LG GA+G V D VA+K + T S + +M+E+K+L + H N++
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 384 RLLGCCIEEGEPILV-YEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYL---- 438
LLG C + G P++V EF G L +L+ +R +P+ +L
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 439 -------HSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTP- 490
+ HRD+ + NILL K+ DFGL+R + ++ P
Sbjct: 155 FQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 214
Query: 491 GYLDPQYHQYFHLSDKSDVYSFGVVLIEIIT 521
++ P+ + +SDV+SFGV+L EI +
Sbjct: 215 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 94/211 (44%), Gaps = 21/211 (9%)
Query: 332 LGTGAYGTVYAGKLHNDD------WVAIKRFRYRDTDSIDQ-VMNEIKLLSSVSHP-NLL 383
LG GA+G V D VA+K + T S + +M+E+K+L + H N++
Sbjct: 72 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 131
Query: 384 RLLGCCIEEGEPILV-YEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYL---- 438
LLG C + G P++V EF G L +L+ +R +P+ +L
Sbjct: 132 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 191
Query: 439 -------HSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTP- 490
+ HRD+ + NILL K+ DFGL+R + ++ P
Sbjct: 192 FQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 251
Query: 491 GYLDPQYHQYFHLSDKSDVYSFGVVLIEIIT 521
++ P+ + +SDV+SFGV+L EI +
Sbjct: 252 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 282
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 89/196 (45%), Gaps = 9/196 (4%)
Query: 326 FSEKHRLGTGAYGTVYAGKLHNDDWVAIKRFRYRDTDSI--DQVMNEIKLLSSVSHPNLL 383
F + LG G G V+ V ++ + + +Q++ E+++L + P ++
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 67
Query: 384 RLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMN 443
G +GE + E M G+L Q L++ +P YL
Sbjct: 68 GFYGAFYSDGEISICMEHMDGGSLDQVLKK--AGRIPEQILGKVSIAVIKGLTYLREKHK 125
Query: 444 PPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHL 503
I HRD+K SNIL++ K+ DFG+S G S ++ + GT Y+ P+ Q H
Sbjct: 126 --IMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS-MANSFVGTRSYMSPERLQGTHY 180
Query: 504 SDKSDVYSFGVVLIEI 519
S +SD++S G+ L+E+
Sbjct: 181 SVQSDIWSMGLSLVEM 196
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 89/196 (45%), Gaps = 9/196 (4%)
Query: 326 FSEKHRLGTGAYGTVYAGKLHNDDWVAIKRFRYRDTDSI--DQVMNEIKLLSSVSHPNLL 383
F + LG G G V+ V ++ + + +Q++ E+++L + P ++
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 67
Query: 384 RLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMN 443
G +GE + E M G+L Q L++ +P YL
Sbjct: 68 GFYGAFYSDGEISICMEHMDGGSLDQVLKK--AGRIPEQILGKVSIAVIKGLTYLREKHK 125
Query: 444 PPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHL 503
I HRD+K SNIL++ K+ DFG+S G S ++ + GT Y+ P+ Q H
Sbjct: 126 --IMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS-MANSFVGTRSYMSPERLQGTHY 180
Query: 504 SDKSDVYSFGVVLIEI 519
S +SD++S G+ L+E+
Sbjct: 181 SVQSDIWSMGLSLVEM 196
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 86/191 (45%), Gaps = 8/191 (4%)
Query: 331 RLGTGAYGTV-YAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGCC 389
++G G+ G V A + H VA+K+ R + + NE+ ++ H N++ +
Sbjct: 52 KIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSY 111
Query: 390 IEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHR 449
+ E +V EF+ G L + R + YLH N + HR
Sbjct: 112 LVGDELWVVMEFLEGGALTDIVTHTRMNE---EQIATVCLSVLRALSYLH---NQGVIHR 165
Query: 450 DIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLSDKSDV 509
DIKS +ILL + R K++DFG +++ GTP ++ P+ + D+
Sbjct: 166 DIKSDSILLTSDGRIKLSDFGFC-AQVSKEVPKRKXLVGTPYWMAPEVISRLPYGTEVDI 224
Query: 510 YSFGVVLIEII 520
+S G+++IE+I
Sbjct: 225 WSLGIMVIEMI 235
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 89/196 (45%), Gaps = 9/196 (4%)
Query: 326 FSEKHRLGTGAYGTVYAGKLHNDDWVAIKRFRYRDTDSI--DQVMNEIKLLSSVSHPNLL 383
F + LG G G V+ V ++ + + +Q++ E+++L + P ++
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 67
Query: 384 RLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMN 443
G +GE + E M G+L Q L++ +P YL
Sbjct: 68 GFYGAFYSDGEISICMEHMDGGSLDQVLKK--AGRIPEQILGKVSIAVIKGLTYLREKHK 125
Query: 444 PPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHL 503
I HRD+K SNIL++ K+ DFG+S G S ++ + GT Y+ P+ Q H
Sbjct: 126 --IMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS-MANSFVGTRSYMSPERLQGTHY 180
Query: 504 SDKSDVYSFGVVLIEI 519
S +SD++S G+ L+E+
Sbjct: 181 SVQSDIWSMGLSLVEM 196
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 98/209 (46%), Gaps = 20/209 (9%)
Query: 332 LGTGAYGTVY---AGKLHNDDWV---AIKRFR-YRDTDSIDQVMNEIKLLSSV-SHPNLL 383
LG GA+G V A L +D V A+K + D + +M+E+K++S + H N++
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 384 RLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSA-- 441
LLG C G +++ E+ G L L+R + L LH +
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFLRR-KSRVLETDPAFAIANSTASTRDLLHFSSQ 172
Query: 442 --------MNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTP-GY 492
+ HRD+ + N+LL + +K+ DFGL+R M +S++I P +
Sbjct: 173 VAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKW 232
Query: 493 LDPQYHQYFHLSDKSDVYSFGVVLIEIIT 521
+ P+ + +SDV+S+G++L EI +
Sbjct: 233 MAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 93/211 (44%), Gaps = 21/211 (9%)
Query: 332 LGTGAYGTVYAGKLHNDD------WVAIKRFRYRDTDSIDQ-VMNEIKLLSSVSHP-NLL 383
LG GA+G V D VA+K + T S + +M+E+K+L + H N++
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 384 RLLGCCIEEGEPILV-YEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYL---- 438
LLG C + G P++V EF G L +L+ +R +P+ +L
Sbjct: 86 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 439 -------HSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTP- 490
+ HRD+ + NILL K+ DFGL+R + + P
Sbjct: 146 FQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPL 205
Query: 491 GYLDPQYHQYFHLSDKSDVYSFGVVLIEIIT 521
++ P+ + +SDV+SFGV+L EI +
Sbjct: 206 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 87/215 (40%), Gaps = 29/215 (13%)
Query: 332 LGTGAYGTVYAGKLHNDDW-VAIKRFRYRDTD-SIDQVMNEIKLLSSVSHPNLLRLLGCC 389
LG G +G V+ K DD AIKR R + + + ++VM E+K L+ + HP ++R
Sbjct: 13 LGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAW 72
Query: 390 IEEGEPILVYEFMPNGTLCQHLQRERGSGLP-WXXXX------------XXXXXXXXXXX 436
+E+ + P L +Q R L W
Sbjct: 73 LEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVE 132
Query: 437 YLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGL-SRLGMTESSHISTAPQ-------- 487
+LHS + HRD+K SNI + KV DFGL + + E P
Sbjct: 133 FLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTG 189
Query: 488 --GTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEII 520
GT Y+ P+ S K D++S G++L E++
Sbjct: 190 QVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 82/333 (24%), Positives = 133/333 (39%), Gaps = 69/333 (20%)
Query: 335 GAYGTVYAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGE 394
G +G V+ +L N+ +VA+K F +D S Q E+ L + H N+L+ +G + G
Sbjct: 35 GRFGCVWKAQLLNE-YVAVKIFPIQDKQSW-QNEYEVYSLPGMKHENILQFIGAE-KRGT 91
Query: 395 PI-----LVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAM------- 442
+ L+ F G+L L + + + W YLH +
Sbjct: 92 SVDVDLWLITAFHEKGSLSDFL---KANVVSWNELCHIAETMARGLAYLHEDIPGLKDGH 148
Query: 443 NPPIYHRDIKSSNILLDYNYRSKVADFGLS-RLGMTESSHISTAPQGTPGYLDPQYHQ-- 499
P I HRDIKS N+LL N + +ADFGL+ + +S+ + GT Y+ P+ +
Sbjct: 149 KPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGA 208
Query: 500 -YFHLSD--KSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDP 556
F + D+Y+ G+VL E+ + D G VDE + P
Sbjct: 209 INFQRDAFLRIDMYAMGLVLWELASRCTAAD--------------------GPVDEYMLP 248
Query: 557 YLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHIRVSSWASNIYMGSPA 616
+ E +L + V H+ RP + + W + M A
Sbjct: 249 FEEEIGQHPSLEDMQEV--------VVHKKKRPVLRDY-----------WQKHAGM---A 286
Query: 617 VSCCSLSEC---GSERSLSGLTVKKAGVKSQRL 646
+ C ++ EC +E LS V + + QRL
Sbjct: 287 MLCETIEECWDHDAEARLSAGCVGERITQMQRL 319
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 98/209 (46%), Gaps = 20/209 (9%)
Query: 332 LGTGAYGTVY---AGKLHNDDWV---AIKRFR-YRDTDSIDQVMNEIKLLSSV-SHPNLL 383
LG GA+G V A L +D V A+K + D + +M+E+K++S + H N++
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 384 RLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSA-- 441
LLG C G +++ E+ G L L+R + L LH +
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFLRR-KSRVLETDPAFAIANSTLSTRDLLHFSSQ 172
Query: 442 --------MNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTP-GY 492
+ HRD+ + N+LL + +K+ DFGL+R M +S++I P +
Sbjct: 173 VAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKW 232
Query: 493 LDPQYHQYFHLSDKSDVYSFGVVLIEIIT 521
+ P+ + +SDV+S+G++L EI +
Sbjct: 233 MAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 93/211 (44%), Gaps = 21/211 (9%)
Query: 332 LGTGAYGTVYAGKLHNDD------WVAIKRFRYRDTDSIDQ-VMNEIKLLSSVSHP-NLL 383
LG GA+G V D VA+K + T S + +M+E+K+L + H N++
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 384 RLLGCCIEEGEPILVY-EFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYL---- 438
LLG C + G P++V EF G L +L+ +R +P+ +L
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 439 -------HSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTP- 490
+ HRD+ + NILL K+ DFGL+R + + P
Sbjct: 146 FQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPL 205
Query: 491 GYLDPQYHQYFHLSDKSDVYSFGVVLIEIIT 521
++ P+ + +SDV+SFGV+L EI +
Sbjct: 206 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 90/198 (45%), Gaps = 9/198 (4%)
Query: 324 SFFSEKHRLGTGAYGTVYAG-KLHNDDWVAIKRFRYRDTDSIDQV-MNEIKLLSSVSHPN 381
F++ R+G G++G VY G H + VAIK + + + EI +LS P
Sbjct: 19 ELFTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 78
Query: 382 LLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSA 441
+ R G ++ + ++ E++ G+ L + L YLHS
Sbjct: 79 ITRYFGSYLKSTKLWIIMEYLGGGSALDLL---KPGPLEETYIATILREILKGLDYLHSE 135
Query: 442 MNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYF 501
HRDIK++N+LL K+ADFG++ +T++ GTP ++ P+ +
Sbjct: 136 RK---IHRDIKAANVLLSEQGDVKLADFGVAG-QLTDTQIKRNXFVGTPFWMAPEVIKQS 191
Query: 502 HLSDKSDVYSFGVVLIEI 519
K+D++S G+ IE+
Sbjct: 192 AYDFKADIWSLGITAIEL 209
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 93/211 (44%), Gaps = 21/211 (9%)
Query: 332 LGTGAYGTVYAGKLHNDD------WVAIKRFRYRDTDSIDQ-VMNEIKLLSSVSHP-NLL 383
LG GA+G V D VA+K + T S + +M+E+K+L + H N++
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 384 RLLGCCIEEGEPILV-YEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYL---- 438
LLG C + G P++V EF G L +L+ +R +P+ +L
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 439 -------HSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTP- 490
+ HRD+ + NILL K+ DFGL+R + + P
Sbjct: 155 FQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPL 214
Query: 491 GYLDPQYHQYFHLSDKSDVYSFGVVLIEIIT 521
++ P+ + +SDV+SFGV+L EI +
Sbjct: 215 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 89/205 (43%), Gaps = 22/205 (10%)
Query: 330 HRLGTGAYGTVYAGKLHNDDWVAI-KRFRYRDTDSIDQVM--NEIKLLSSVSHPNLLRLL 386
+ +GTG+YG + +D + + K Y ++ M +E+ LL + HPN++R
Sbjct: 12 YTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYY 71
Query: 387 GCCIEEGEPIL--VYEFMPNGTLC----------QHLQRERGSGLPWXXXXXXXXXXXXX 434
I+ L V E+ G L Q+L E +
Sbjct: 72 DRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEE------FVLRVMTQLTLALK 125
Query: 435 XXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLD 494
+ S + HRD+K +N+ LD K+ DFGL+R+ ++S T GTP Y+
Sbjct: 126 ECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFV-GTPYYMS 184
Query: 495 PQYHQYFHLSDKSDVYSFGVVLIEI 519
P+ ++KSD++S G +L E+
Sbjct: 185 PEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 98/216 (45%), Gaps = 30/216 (13%)
Query: 332 LGTGAYGTVYAGKLHNDD--------WVAIKRFRYRDTDS-IDQVMNEIKLLSSV-SHPN 381
LG G +G V + D VA+K + T+ + +++E++++ + H N
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 94
Query: 382 LLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHS- 440
++ LLG C ++G ++ E+ G L ++L+ R G+ + L S
Sbjct: 95 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 154
Query: 441 ----------AMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTP 490
+ HRD+ + N+L+ N K+ADFGL+R + ++I + T
Sbjct: 155 TYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR----DINNIDYYKKTTN 210
Query: 491 GYLDPQYHQYFHLSDK-----SDVYSFGVVLIEIIT 521
G L ++ L D+ SDV+SFGV++ EI T
Sbjct: 211 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 246
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 98/216 (45%), Gaps = 30/216 (13%)
Query: 332 LGTGAYGTVYAGKLHNDD--------WVAIKRFRYRDTDS-IDQVMNEIKLLSSV-SHPN 381
LG G +G V + D VA+K + T+ + +++E++++ + H N
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 91
Query: 382 LLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHS- 440
++ LLG C ++G ++ E+ G L ++L+ R G+ + L S
Sbjct: 92 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 151
Query: 441 ----------AMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTP 490
+ HRD+ + N+L+ N K+ADFGL+R + ++I + T
Sbjct: 152 TYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR----DINNIDYYKKTTN 207
Query: 491 GYLDPQYHQYFHLSDK-----SDVYSFGVVLIEIIT 521
G L ++ L D+ SDV+SFGV++ EI T
Sbjct: 208 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 243
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 98/216 (45%), Gaps = 30/216 (13%)
Query: 332 LGTGAYGTVYAGKLHNDD--------WVAIKRFRYRDTDS-IDQVMNEIKLLSSV-SHPN 381
LG G +G V + D VA+K + T+ + +++E++++ + H N
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 89
Query: 382 LLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHS- 440
++ LLG C ++G ++ E+ G L ++L+ R G+ + L S
Sbjct: 90 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 149
Query: 441 ----------AMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTP 490
+ HRD+ + N+L+ N K+ADFGL+R + ++I + T
Sbjct: 150 TYQLARGMEYLASQKCIHRDLTARNVLVTENNVMKIADFGLAR----DINNIDYYKKTTN 205
Query: 491 GYLDPQYHQYFHLSDK-----SDVYSFGVVLIEIIT 521
G L ++ L D+ SDV+SFGV++ EI T
Sbjct: 206 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 241
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 98/216 (45%), Gaps = 30/216 (13%)
Query: 332 LGTGAYGTVYAGKLHNDD--------WVAIKRFRYRDTDS-IDQVMNEIKLLSSV-SHPN 381
LG G +G V + D VA+K + T+ + +++E++++ + H N
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 148
Query: 382 LLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHS- 440
++ LLG C ++G ++ E+ G L ++L+ R G+ + L S
Sbjct: 149 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 208
Query: 441 ----------AMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTP 490
+ HRD+ + N+L+ N K+ADFGL+R + ++I + T
Sbjct: 209 TYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR----DINNIDYYKKTTN 264
Query: 491 GYLDPQYHQYFHLSDK-----SDVYSFGVVLIEIIT 521
G L ++ L D+ SDV+SFGV++ EI T
Sbjct: 265 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 300
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 93/211 (44%), Gaps = 21/211 (9%)
Query: 332 LGTGAYGTVYAGKLHNDD------WVAIKRFRYRDTDSIDQ-VMNEIKLLSSVSHP-NLL 383
LG GA+G V D VA+K + T S + +M+E+K+L + H N++
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 384 RLLGCCIEEGEPILV-YEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYL---- 438
LLG C + G P++V EF G L +L+ +R +P+ +L
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 439 -------HSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTP- 490
+ HRD+ + NILL K+ DFGL+R + + P
Sbjct: 155 FQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDARLPL 214
Query: 491 GYLDPQYHQYFHLSDKSDVYSFGVVLIEIIT 521
++ P+ + +SDV+SFGV+L EI +
Sbjct: 215 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 98/216 (45%), Gaps = 30/216 (13%)
Query: 332 LGTGAYGTVYAGKLHNDD--------WVAIKRFRYRDTDS-IDQVMNEIKLLSSV-SHPN 381
LG GA+G V + D VA+K + T+ + +++E++++ + H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 382 LLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHS- 440
++ LLG C ++G ++ + G L ++L+ R G+ + L S
Sbjct: 103 IINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 441 ----------AMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTP 490
+ HRD+ + N+L+ N K+ADFGL+R + ++I + T
Sbjct: 163 TYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR----DINNIDYYKKTTN 218
Query: 491 GYLDPQYHQYFHLSDK-----SDVYSFGVVLIEIIT 521
G L ++ L D+ SDV+SFGV++ EI T
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 93/209 (44%), Gaps = 19/209 (9%)
Query: 332 LGTGAYGTVYAGKLHNDD------WVAIKRFRYRDTDSIDQ-VMNEIKLLSSVSHP-NLL 383
LG GA+G V D VA+K + T S + +M+E+K+L + H N++
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 384 RLLGCCIEEGEPILV-YEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHS-- 440
LLG C + G P++V EF G L +L+ +R +P+ +S
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQ 156
Query: 441 -------AMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTP-GY 492
+ HRD+ + NILL K+ DFGL+R + + P +
Sbjct: 157 VAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKW 216
Query: 493 LDPQYHQYFHLSDKSDVYSFGVVLIEIIT 521
+ P+ + +SDV+SFGV+L EI +
Sbjct: 217 MAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 100/209 (47%), Gaps = 18/209 (8%)
Query: 325 FFSEKHRLGTGAYGTVYAGKLHND-----DWVAIKRFRYRDT-DSIDQVMNEIKLLSSVS 378
F LG G +G V + + + VA+K + + I + EI++L ++
Sbjct: 22 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLY 81
Query: 379 HPNLLRLLGCCIEEGEP--ILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXX 436
H N+++ G C E+G L+ EF+P+G+L ++L + + +
Sbjct: 82 HENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNK-INLKQQLKYAVQICKGMD 140
Query: 437 YLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTA-PQGTPGY-LD 494
YL S HRD+ + N+L++ ++ K+ DFGL++ T+ + + +P +
Sbjct: 141 YLGSRQ---YVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYA 197
Query: 495 PQ--YHQYFHLSDKSDVYSFGVVLIEIIT 521
P+ F+++ SDV+SFGV L E++T
Sbjct: 198 PECLMQSKFYIA--SDVWSFGVTLHELLT 224
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 98/220 (44%), Gaps = 33/220 (15%)
Query: 332 LGTGAYGTVY---AGKLHNDDWV---AIKRFR-YRDTDSIDQVMNEIKLLSSV-SHPNLL 383
LG GA+G V A L +D V A+K + D + +M+E+K++S + H N++
Sbjct: 39 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 98
Query: 384 RLLGCCIEEGEPILVYEFMPNGTLCQHLQR---------------------ERGSGLPWX 422
LLG C G +++ E+ G L L+R E G L
Sbjct: 99 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLELR 158
Query: 423 XXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHI 482
+L S HRD+ + N+LL + +K+ DFGL+R M +S++I
Sbjct: 159 DLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYI 215
Query: 483 STAPQGTP-GYLDPQYHQYFHLSDKSDVYSFGVVLIEIIT 521
P ++ P+ + +SDV+S+G++L EI +
Sbjct: 216 VKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 255
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 97/199 (48%), Gaps = 17/199 (8%)
Query: 332 LGTGAYGTVYAG-----KLHNDDWVAIKRFRYRDTDSID--QVMNEIKLLSSVSHPNLLR 384
LG G +G+V G K D VAIK + + T+ D ++M E +++ + +P ++R
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQID--VAIKVLK-QGTEKADTEEMMREAQIMHQLDNPYIVR 400
Query: 385 LLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNP 444
L+G C E +LV E G L + L +R +P YL
Sbjct: 401 LIGVCQAEAL-MLVMEMAGGGPLHKFLVGKREE-IPVSNVAELLHQVSMGMKYLEEKN-- 456
Query: 445 PIYHRDIKSSNILLDYNYRSKVADFGLSR-LGMTESSHISTAPQGTP-GYLDPQYHQYFH 502
HR++ + N+LL + +K++DFGLS+ LG +S + + + P + P+ +
Sbjct: 457 -FVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRK 515
Query: 503 LSDKSDVYSFGVVLIEIIT 521
S +SDV+S+GV + E ++
Sbjct: 516 FSSRSDVWSYGVTMWEALS 534
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 100/209 (47%), Gaps = 18/209 (8%)
Query: 325 FFSEKHRLGTGAYGTVYAGKLHND-----DWVAIKRFRYRDT-DSIDQVMNEIKLLSSVS 378
F LG G +G V + + + VA+K + + I + EI++L ++
Sbjct: 10 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLY 69
Query: 379 HPNLLRLLGCCIEEGEP--ILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXX 436
H N+++ G C E+G L+ EF+P+G+L ++L + + +
Sbjct: 70 HENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNK-INLKQQLKYAVQICKGMD 128
Query: 437 YLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTA-PQGTPGY-LD 494
YL S HRD+ + N+L++ ++ K+ DFGL++ T+ + + +P +
Sbjct: 129 YLGSRQ---YVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYA 185
Query: 495 PQ--YHQYFHLSDKSDVYSFGVVLIEIIT 521
P+ F+++ SDV+SFGV L E++T
Sbjct: 186 PECLMQSKFYIA--SDVWSFGVTLHELLT 212
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 90/195 (46%), Gaps = 12/195 (6%)
Query: 332 LGTGAYGTVYAGKLHNDD----WVAIKRFRYRDTDSI-DQVMNEIKLLSSVSHPNLLRLL 386
+G G +G V+ G + + VAIK + +DS+ ++ + E + HP++++L+
Sbjct: 23 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 82
Query: 387 GCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPI 446
G I E ++ E G L LQ + S L YL S
Sbjct: 83 GV-ITENPVWIIMELCTLGELRSFLQVRKYS-LDLASLILYAYQLSTALAYLESKR---F 137
Query: 447 YHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTP-GYLDPQYHQYFHLSD 505
HRDI + N+L+ N K+ DFGLSR M +S++ + P ++ P+ + +
Sbjct: 138 VHRDIAARNVLVSSNDCVKLGDFGLSRY-MEDSTYYKASKGKLPIKWMAPESINFRRFTS 196
Query: 506 KSDVYSFGVVLIEII 520
SDV+ FGV + EI+
Sbjct: 197 ASDVWMFGVCMWEIL 211
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 89/198 (44%), Gaps = 13/198 (6%)
Query: 326 FSEKHRLGTGAYGTVYAGK-LHNDDWVAIK---RFRYRDTDSIDQVMNEIKLLSSVSHPN 381
F +GTG++G V K + + A+K + + I+ +NE ++L +V+ P
Sbjct: 43 FERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 382 LLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSA 441
L++L + +V E+MP G + HL+R P YLHS
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLHSL 160
Query: 442 MNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYF 501
+ +RD+K N+L+D KVADFG ++ + + GTP YL P+
Sbjct: 161 ---DLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLC----GTPEYLAPEIILSK 213
Query: 502 HLSDKSDVYSFGVVLIEI 519
+ D ++ GV++ E+
Sbjct: 214 GYNKAVDWWALGVLIYEM 231
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 89/198 (44%), Gaps = 13/198 (6%)
Query: 326 FSEKHRLGTGAYGTVYAGK-LHNDDWVAIK---RFRYRDTDSIDQVMNEIKLLSSVSHPN 381
F +GTG++G V K + + A+K + + I+ +NE ++L +V+ P
Sbjct: 43 FERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 382 LLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSA 441
L++L + +V E+MP G + HL+R P YLHS
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLHSL 160
Query: 442 MNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYF 501
+ +RD+K N+L+D KVADFG ++ + + GTP YL P+
Sbjct: 161 ---DLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLC----GTPEYLAPEIILSK 213
Query: 502 HLSDKSDVYSFGVVLIEI 519
+ D ++ GV++ E+
Sbjct: 214 GYNKAVDWWALGVLIYEM 231
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 98/216 (45%), Gaps = 30/216 (13%)
Query: 332 LGTGAYGTVYAGKLHNDD--------WVAIKRFRYRDTDS-IDQVMNEIKLLSSV-SHPN 381
LG GA+G V + D VA+K + T+ + +++E++++ + H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 382 LLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHS- 440
++ LLG C ++G ++ + G L ++L+ R G+ + L S
Sbjct: 103 IINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 441 ----------AMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTP 490
+ HRD+ + N+L+ N K+ADFGL+R + ++I + T
Sbjct: 163 TYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR----DINNIDYYKKTTN 218
Query: 491 GYLDPQYHQYFHLSDK-----SDVYSFGVVLIEIIT 521
G L ++ L D+ SDV+SFGV++ EI T
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 116/277 (41%), Gaps = 44/277 (15%)
Query: 332 LGTGAYGTVYAGKLHNDDWVAIKRFRYRD---TDSIDQ-VMNEIKLLSSVSHPNLLRLLG 387
+G G++ TVY G L + V + +D T S Q E + L + HPN++R
Sbjct: 34 IGRGSFKTVYKG-LDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFYD 92
Query: 388 C---------CIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYL 438
CI +LV E +GTL +L+R + + +L
Sbjct: 93 SWESTVKGKKCI-----VLVTELXTSGTLKTYLKRFKVXKIK--VLRSWCRQILKGLQFL 145
Query: 439 HSAMNPPIYHRDIKSSNILLDYNYRS-KVADFGLSRLGMTESSHISTAPQGTPGYLDPQY 497
H+ PPI HRD+K NI + S K+ D GL+ L + + + A GTP + P+
Sbjct: 146 HT-RTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATL---KRASFAKAVIGTPEFXAPEX 201
Query: 498 HQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPY 557
++ + + DVY+FG +E T+ P+SE AA R+ G D
Sbjct: 202 YEEKY-DESVDVYAFGXCXLEXATS------EYPYSECQNAAQIYRRVTSGVKPASFDKV 254
Query: 558 LEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEV 594
+I V E+ C+ ++D R ++ ++
Sbjct: 255 -----------AIPEVKEIIEGCIRQNKDERYSIKDL 280
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 90/195 (46%), Gaps = 12/195 (6%)
Query: 332 LGTGAYGTVYAGKLHNDD----WVAIKRFRYRDTDSI-DQVMNEIKLLSSVSHPNLLRLL 386
+G G +G V+ G + + VAIK + +DS+ ++ + E + HP++++L+
Sbjct: 20 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 79
Query: 387 GCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPI 446
G I E ++ E G L LQ + S L YL S
Sbjct: 80 GV-ITENPVWIIMELCTLGELRSFLQVRKYS-LDLASLILYAYQLSTALAYLESKR---F 134
Query: 447 YHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTP-GYLDPQYHQYFHLSD 505
HRDI + N+L+ N K+ DFGLSR M +S++ + P ++ P+ + +
Sbjct: 135 VHRDIAARNVLVSSNDCVKLGDFGLSRY-MEDSTYYKASKGKLPIKWMAPESINFRRFTS 193
Query: 506 KSDVYSFGVVLIEII 520
SDV+ FGV + EI+
Sbjct: 194 ASDVWMFGVCMWEIL 208
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 87/205 (42%), Gaps = 22/205 (10%)
Query: 330 HRLGTGAYGTVYAGKLHNDDWVAI-KRFRYRDTDSIDQVM--NEIKLLSSVSHPNLLRLL 386
+ +GTG+YG + +D + + K Y ++ M +E+ LL + HPN++R
Sbjct: 12 YTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYY 71
Query: 387 GCCIEEGEPIL--VYEFMPNGTLC----------QHLQRERGSGLPWXXXXXXXXXXXXX 434
I+ L V E+ G L Q+L E +
Sbjct: 72 DRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEE------FVLRVMTQLTLALK 125
Query: 435 XXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLD 494
+ S + HRD+K +N+ LD K+ DFGL+R+ + + GTP Y+
Sbjct: 126 ECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARI-LNHDEDFAKEFVGTPYYMS 184
Query: 495 PQYHQYFHLSDKSDVYSFGVVLIEI 519
P+ ++KSD++S G +L E+
Sbjct: 185 PEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 90/195 (46%), Gaps = 12/195 (6%)
Query: 332 LGTGAYGTVYAGKLHNDD----WVAIKRFRYRDTDSI-DQVMNEIKLLSSVSHPNLLRLL 386
+G G +G V+ G + + VAIK + +DS+ ++ + E + HP++++L+
Sbjct: 21 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 80
Query: 387 GCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPI 446
G I E ++ E G L LQ + S L YL S
Sbjct: 81 GV-ITENPVWIIMELCTLGELRSFLQVRKYS-LDLASLILYAYQLSTALAYLESKR---F 135
Query: 447 YHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTP-GYLDPQYHQYFHLSD 505
HRDI + N+L+ N K+ DFGLSR M +S++ + P ++ P+ + +
Sbjct: 136 VHRDIAARNVLVSSNDCVKLGDFGLSRY-MEDSTYYKASKGKLPIKWMAPESINFRRFTS 194
Query: 506 KSDVYSFGVVLIEII 520
SDV+ FGV + EI+
Sbjct: 195 ASDVWMFGVCMWEIL 209
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 82/200 (41%), Gaps = 23/200 (11%)
Query: 332 LGTGAYGTV-----------YAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHP 380
LG G +G V YA K+ + + K D + + E ++L + HP
Sbjct: 156 LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAK-------DEVAHTLTENRVLQNSRHP 208
Query: 381 NLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHS 440
L L V E+ G L HL RER YLHS
Sbjct: 209 FLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERV--FSEDRARFYGAEIVSALDYLHS 266
Query: 441 AMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQY 500
N + +RD+K N++LD + K+ DFGL + G+ + + + T GTP YL P+ +
Sbjct: 267 EKN--VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFC-GTPEYLAPEVLED 323
Query: 501 FHLSDKSDVYSFGVVLIEII 520
D + GVV+ E++
Sbjct: 324 NDYGRAVDWWGLGVVMYEMM 343
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 82/200 (41%), Gaps = 23/200 (11%)
Query: 332 LGTGAYGTV-----------YAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHP 380
LG G +G V YA K+ + + K D + + E ++L + HP
Sbjct: 159 LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAK-------DEVAHTLTENRVLQNSRHP 211
Query: 381 NLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHS 440
L L V E+ G L HL RER YLHS
Sbjct: 212 FLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERV--FSEDRARFYGAEIVSALDYLHS 269
Query: 441 AMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQY 500
N + +RD+K N++LD + K+ DFGL + G+ + + + T GTP YL P+ +
Sbjct: 270 EKN--VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFC-GTPEYLAPEVLED 326
Query: 501 FHLSDKSDVYSFGVVLIEII 520
D + GVV+ E++
Sbjct: 327 NDYGRAVDWWGLGVVMYEMM 346
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 96/214 (44%), Gaps = 37/214 (17%)
Query: 331 RLGTGAYGTVYAGKLHNDDWVAIKRF-------RYRDTDSIDQVMNEIKLLSSVSHPNLL 383
++G G YG V+ GK + VA+K F +R+T+ V+ + H N+L
Sbjct: 44 QIGKGRYGEVWMGKWRGEK-VAVKVFFTTEEASWFRETEIYQTVL--------MRHENIL 94
Query: 384 RLLGCCIE----EGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLH 439
+ I+ + L+ ++ NG+L +L + + L +LH
Sbjct: 95 GFIAADIKGTGSWTQLYLITDYHENGSLYDYL---KSTTLDAKSMLKLAYSSVSGLCHLH 151
Query: 440 SAM-----NPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQ---GTPG 491
+ + P I HRD+KS NIL+ N +AD GL+ +++++ + P GT
Sbjct: 152 TEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKR 211
Query: 492 YLDPQY------HQYFHLSDKSDVYSFGVVLIEI 519
Y+ P+ +F +D+YSFG++L E+
Sbjct: 212 YMPPEVLDESLNRNHFQSYIMADMYSFGLILWEV 245
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 89/195 (45%), Gaps = 12/195 (6%)
Query: 332 LGTGAYGTVYAGKLHNDD----WVAIKRFRYRDTDSI-DQVMNEIKLLSSVSHPNLLRLL 386
+G G +G V+ G + + VAIK + +DS+ ++ + E + HP++++L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 387 GCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPI 446
G I E ++ E G L LQ R L YL S
Sbjct: 78 GV-ITENPVWIIMELCTLGELRSFLQ-VRKYSLDLASLILYAYQLSTALAYLESKR---F 132
Query: 447 YHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTP-GYLDPQYHQYFHLSD 505
HRDI + N+L+ N K+ DFGLSR M +S++ + P ++ P+ + +
Sbjct: 133 VHRDIAARNVLVSSNDCVKLGDFGLSRY-MEDSTYYKASKGKLPIKWMAPESINFRRFTS 191
Query: 506 KSDVYSFGVVLIEII 520
SDV+ FGV + EI+
Sbjct: 192 ASDVWMFGVCMWEIL 206
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 90/195 (46%), Gaps = 12/195 (6%)
Query: 332 LGTGAYGTVYAGKLHNDD----WVAIKRFRYRDTDSI-DQVMNEIKLLSSVSHPNLLRLL 386
+G G +G V+ G + + VAIK + +DS+ ++ + E + HP++++L+
Sbjct: 46 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 105
Query: 387 GCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPI 446
G I E ++ E G L LQ + S L YL S
Sbjct: 106 GV-ITENPVWIIMELCTLGELRSFLQVRKYS-LDLASLILYAYQLSTALAYLESKR---F 160
Query: 447 YHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTP-GYLDPQYHQYFHLSD 505
HRDI + N+L+ N K+ DFGLSR M +S++ + P ++ P+ + +
Sbjct: 161 VHRDIAARNVLVSSNDCVKLGDFGLSRY-MEDSTYYKASKGKLPIKWMAPESINFRRFTS 219
Query: 506 KSDVYSFGVVLIEII 520
SDV+ FGV + EI+
Sbjct: 220 ASDVWMFGVCMWEIL 234
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 89/195 (45%), Gaps = 12/195 (6%)
Query: 332 LGTGAYGTVYAGKLHNDD----WVAIKRFRYRDTDSI-DQVMNEIKLLSSVSHPNLLRLL 386
+G G +G V+ G + + VAIK + +DS+ ++ + E + HP++++L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 387 GCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPI 446
G I E ++ E G L LQ R L YL S
Sbjct: 78 GV-ITENPVWIIMELCTLGELRSFLQ-VRKYSLDLASLILYAYQLSTALAYLESKR---F 132
Query: 447 YHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTP-GYLDPQYHQYFHLSD 505
HRDI + N+L+ N K+ DFGLSR M +S++ + P ++ P+ + +
Sbjct: 133 VHRDIAARNVLVSSNDCVKLGDFGLSRY-MEDSTYYKASKGKLPIKWMAPESINFRRFTS 191
Query: 506 KSDVYSFGVVLIEII 520
SDV+ FGV + EI+
Sbjct: 192 ASDVWMFGVCMWEIL 206
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 90/210 (42%), Gaps = 16/210 (7%)
Query: 322 ATSFFSEKHRLGTGAYGTVYAG-KLHNDDWVAIKRFRYRDTDSI-DQVMNEIKLLSSVSH 379
++S F + +LG G Y TVY G +VA+K + + + EI L+ + H
Sbjct: 3 SSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKH 62
Query: 380 PNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGS---GLPWXXXXXXXXXXXXXXX 436
N++RL E + LV+EFM N R G+ GL
Sbjct: 63 ENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLA 122
Query: 437 YLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSR-LGM---TESSHISTAPQGTPGY 492
+ H I HRD+K N+L++ + K+ DFGL+R G+ T SS + T P
Sbjct: 123 FCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDV 179
Query: 493 LDPQYHQYFHLSDKSDVYSFGVVLIEIITA 522
L S D++S G +L E+IT
Sbjct: 180 LMGSR----TYSTSIDIWSCGCILAEMITG 205
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 91/198 (45%), Gaps = 20/198 (10%)
Query: 332 LGTGAYGTVYAGKLH-NDDWVAIK---RFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLG 387
LG G +G V G+ VA+K R + R D + ++ EI+ L HP++++L
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQ 78
Query: 388 CCIEEGEPILVYEFMPNGTL----CQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMN 443
+ +V E++ G L C+H + E Y H M
Sbjct: 79 VISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEA------RRLFQQILSAVDYCHRHM- 131
Query: 444 PPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQY-HQYFH 502
+ HRD+K N+LLD + +K+ADFGLS + M++ + + G+P Y P+ +
Sbjct: 132 --VVHRDLKPENVLLDAHMNAKIADFGLSNM-MSDGEFLRDSC-GSPNYAAPEVISGRLY 187
Query: 503 LSDKSDVYSFGVVLIEII 520
+ D++S GV+L ++
Sbjct: 188 AGPEVDIWSCGVILYALL 205
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 89/195 (45%), Gaps = 12/195 (6%)
Query: 332 LGTGAYGTVYAGKLHNDD----WVAIKRFRYRDTDSI-DQVMNEIKLLSSVSHPNLLRLL 386
+G G +G V+ G + + VAIK + +DS+ ++ + E + HP++++L+
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 74
Query: 387 GCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPI 446
G I E ++ E G L LQ R L YL S
Sbjct: 75 GV-ITENPVWIIMELCTLGELRSFLQV-RKYSLDLASLILYAYQLSTALAYLESKR---F 129
Query: 447 YHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTP-GYLDPQYHQYFHLSD 505
HRDI + N+L+ N K+ DFGLSR M +S++ + P ++ P+ + +
Sbjct: 130 VHRDIAARNVLVSSNDCVKLGDFGLSRY-MEDSTYYKASKGKLPIKWMAPESINFRRFTS 188
Query: 506 KSDVYSFGVVLIEII 520
SDV+ FGV + EI+
Sbjct: 189 ASDVWMFGVCMWEIL 203
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 89/195 (45%), Gaps = 12/195 (6%)
Query: 332 LGTGAYGTVYAGKLHNDD----WVAIKRFRYRDTDSI-DQVMNEIKLLSSVSHPNLLRLL 386
+G G +G V+ G + + VAIK + +DS+ ++ + E + HP++++L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 387 GCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPI 446
G I E ++ E G L LQ + S L YL S
Sbjct: 78 GV-ITENPVWIIMELCTLGELRSFLQVRKFS-LDLASLILYAYQLSTALAYLESKR---F 132
Query: 447 YHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTP-GYLDPQYHQYFHLSD 505
HRDI + N+L+ N K+ DFGLSR M +S+ + P ++ P+ + +
Sbjct: 133 VHRDIAARNVLVSSNDCVKLGDFGLSRY-MEDSTXXKASKGKLPIKWMAPESINFRRFTS 191
Query: 506 KSDVYSFGVVLIEII 520
SDV+ FGV + EI+
Sbjct: 192 ASDVWMFGVCMWEIL 206
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 92/210 (43%), Gaps = 20/210 (9%)
Query: 332 LGTGAYGTVYAGKLHNDD------WVAIKRFRYRDTDSIDQ-VMNEIKLLSSVSHP-NLL 383
LG GA+G V D VA+K + T S + +M+E+K+L + H N++
Sbjct: 36 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 95
Query: 384 RLLGCCIEEGEPILV-YEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXY----- 437
LLG C + G P++V EF G L +L+ +R +P+
Sbjct: 96 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSF 155
Query: 438 -----LHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTP-G 491
+ + HRD+ + NILL K+ DFGL+R + + P
Sbjct: 156 QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLK 215
Query: 492 YLDPQYHQYFHLSDKSDVYSFGVVLIEIIT 521
++ P+ + +SDV+SFGV+L EI +
Sbjct: 216 WMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 90/202 (44%), Gaps = 24/202 (11%)
Query: 332 LGTGAYGTVYAGKLHNDD---WVAIKRFRYRDTDSIDQ--VMNEIKLLSSVSHPNLLRLL 386
+G G+YG V K N D VAIK+F D D + + M EIKLL + H NL+ LL
Sbjct: 33 VGEGSYGMVM--KCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLL 90
Query: 387 GCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPI 446
C ++ LV+EF+ + T+ L+ +GL + + HS I
Sbjct: 91 EVCKKKKRWYLVFEFV-DHTILDDLEL-FPNGLDYQVVQKYLFQIINGIGFCHSH---NI 145
Query: 447 YHRDIKSSNILLDYNYRSKVADFGLSRL----GMTESSHISTAPQGTPGYL--DPQYHQY 500
HRDIK NIL+ + K+ DFG +R G ++T P L D +Y
Sbjct: 146 IHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPELLVGDVKY--- 202
Query: 501 FHLSDKSDVYSFGVVLIEIITA 522
DV++ G ++ E+
Sbjct: 203 ---GKAVDVWAIGCLVTEMFMG 221
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 88/196 (44%), Gaps = 9/196 (4%)
Query: 326 FSEKHRLGTGAYGTVYAGKLHNDDWVAIKRFRYRDTDSI--DQVMNEIKLLSSVSHPNLL 383
F LG G G V + + ++ + + +Q++ E+++L + P ++
Sbjct: 18 FERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 77
Query: 384 RLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMN 443
G +GE + E M G+L Q L+ + +P YL
Sbjct: 78 GFYGAFYSDGEISICMEHMDGGSLDQVLKEAKR--IPEEILGKVSIAVLRGLAYLREKHQ 135
Query: 444 PPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHL 503
I HRD+K SNIL++ K+ DFG+S G S ++ + GT Y+ P+ Q H
Sbjct: 136 --IMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS-MANSFVGTRSYMAPERLQGTHY 190
Query: 504 SDKSDVYSFGVVLIEI 519
S +SD++S G+ L+E+
Sbjct: 191 SVQSDIWSMGLSLVEL 206
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 90/195 (46%), Gaps = 12/195 (6%)
Query: 332 LGTGAYGTVYAGKLHNDD----WVAIKRFRYRDTDSI-DQVMNEIKLLSSVSHPNLLRLL 386
+G G +G V+ G + + VAIK + +DS+ ++ + E + HP++++L+
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 387 GCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPI 446
G I E ++ E G L LQ + S L YL S
Sbjct: 458 GV-ITENPVWIIMELCTLGELRSFLQVRKFS-LDLASLILYAYQLSTALAYLESKR---F 512
Query: 447 YHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTP-GYLDPQYHQYFHLSD 505
HRDI + N+L+ N K+ DFGLSR M +S++ + P ++ P+ + +
Sbjct: 513 VHRDIAARNVLVSSNDCVKLGDFGLSRY-MEDSTYYKASKGKLPIKWMAPESINFRRFTS 571
Query: 506 KSDVYSFGVVLIEII 520
SDV+ FGV + EI+
Sbjct: 572 ASDVWMFGVCMWEIL 586
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 102/227 (44%), Gaps = 21/227 (9%)
Query: 332 LGTGAYGTVYAGK-LHND-DWVAIKRFRYRDTD-----SIDQVMNEIKLLSSVSHPNLLR 384
+G GAYG V+ + L N +VA+KR R + + S + + ++ L + HPN++R
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 385 LLGCCI-----EEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLH 439
L C E + LV+E + + L +L + G+P +LH
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLH 137
Query: 440 SAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQ 499
S + HRD+K NIL+ + + K+ADFGL+R+ + + S T Y P+
Sbjct: 138 SHR---VVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVV--VTLWYRAPEVLL 192
Query: 500 YFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIG 546
+ D++S G + E+ + R S+V+ +D IG
Sbjct: 193 QSSYATPVDLWSVGCIFAEM---FRRKPLFRGSSDVDQLGKILDVIG 236
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 88/191 (46%), Gaps = 8/191 (4%)
Query: 331 RLGTGAYGTV-YAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGCC 389
++G G+ G V A + H+ VA+K R + + NE+ ++ H N++ +
Sbjct: 52 KIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSY 111
Query: 390 IEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHR 449
+ E ++ EF+ G L + + R L YLH+ + HR
Sbjct: 112 LVGEELWVLMEFLQGGALTDIVSQVR---LNEEQIATVCEAVLQALAYLHAQ---GVIHR 165
Query: 450 DIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLSDKSDV 509
DIKS +ILL + R K++DFG +++ GTP ++ P+ + + D+
Sbjct: 166 DIKSDSILLTLDGRVKLSDFGFCA-QISKDVPKRKXLVGTPYWMAPEVISRSLYATEVDI 224
Query: 510 YSFGVVLIEII 520
+S G+++IE++
Sbjct: 225 WSLGIMVIEMV 235
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 74/157 (47%), Gaps = 10/157 (6%)
Query: 369 NEIKLLSSVSHPNLLRLLGCCIEEGEP--ILVYEFMPNGTLCQHLQRERGSGLPWXXXXX 426
EI +L ++ H ++++ GCC ++GE LV E++P G+L +L R +
Sbjct: 65 QEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRH---SIGLAQLLL 121
Query: 427 XXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAP 486
YLHS HR++ + N+LLD + K+ DFGL++ +
Sbjct: 122 FAQQICEGMAYLHSQH---YIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVRE 178
Query: 487 QGTPG--YLDPQYHQYFHLSDKSDVYSFGVVLIEIIT 521
G + P+ + + SDV+SFGV L E++T
Sbjct: 179 DGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 98/215 (45%), Gaps = 15/215 (6%)
Query: 324 SFFSEKHRLGTGAYGTVYAG-KLHNDDWVAIKRFRYRDTDSIDQV-MNEIKLLSSVSHPN 381
F++ ++G G++G V+ G VAIK + + + EI +LS P
Sbjct: 27 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 86
Query: 382 LLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSA 441
+ + G +++ + ++ E++ G+ L+ L YLHS
Sbjct: 87 VTKYYGSYLKDTKLWIIMEYLGGGSALDLLEP---GPLDETQIATILREILKGLDYLHSE 143
Query: 442 MNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYF 501
HRDIK++N+LL + K+ADFG++ +T++ GTP ++ P+ +
Sbjct: 144 KK---IHRDIKAANVLLSEHGEVKLADFGVAG-QLTDTQIKRNTFVGTPFWMAPEVIKQS 199
Query: 502 HLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVN 536
K+D++S G ITA+++ PHSE++
Sbjct: 200 AYDSKADIWSLG------ITAIELARGEPPHSELH 228
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 88/190 (46%), Gaps = 13/190 (6%)
Query: 332 LGTGAYGTV-YAGKLHNDDWVAIKRFRYR---DTDSIDQVMNEIKLLSSVSHPNLLRLLG 387
LG G++G V A VA+K + +D ++ EI L + HP++++L
Sbjct: 21 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 80
Query: 388 CCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIY 447
+ E I+V E+ N +QR++ S Y H I
Sbjct: 81 VIKSKDEIIMVIEYAGNELFDYIVQRDKMSE---QEARRFFQQIISAVEYCHRH---KIV 134
Query: 448 HRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQ-YFHLSDK 506
HRD+K N+LLD + K+ADFGLS + MT+ + + T+ G+P Y P+ + +
Sbjct: 135 HRDLKPENLLLDEHLNVKIADFGLSNI-MTDGNFLKTSC-GSPNYAAPEVISGKLYAGPE 192
Query: 507 SDVYSFGVVL 516
DV+S GV+L
Sbjct: 193 VDVWSCGVIL 202
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 102/227 (44%), Gaps = 21/227 (9%)
Query: 332 LGTGAYGTVYAGK-LHND-DWVAIKRFRYRDTD-----SIDQVMNEIKLLSSVSHPNLLR 384
+G GAYG V+ + L N +VA+KR R + + S + + ++ L + HPN++R
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 385 LLGCCI-----EEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLH 439
L C E + LV+E + + L +L + G+P +LH
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLH 137
Query: 440 SAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQ 499
S + HRD+K NIL+ + + K+ADFGL+R+ + + S T Y P+
Sbjct: 138 SHR---VVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVV--TLWYRAPEVLL 192
Query: 500 YFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIG 546
+ D++S G + E+ + R S+V+ +D IG
Sbjct: 193 QSSYATPVDLWSVGCIFAEM---FRRKPLFRGSSDVDQLGKILDVIG 236
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 89/198 (44%), Gaps = 13/198 (6%)
Query: 326 FSEKHRLGTGAYGTVYAGK-LHNDDWVAIK---RFRYRDTDSIDQVMNEIKLLSSVSHPN 381
F +GTG++G V K + + A+K + + I+ +NE ++L +V+ P
Sbjct: 43 FERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 382 LLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSA 441
L++L + +V E++P G + HL+R P YLHS
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLHSL 160
Query: 442 MNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYF 501
+ +RD+K N+L+D KVADFG ++ + + GTP YL P+
Sbjct: 161 ---DLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLC----GTPEYLAPEIILSK 213
Query: 502 HLSDKSDVYSFGVVLIEI 519
+ D ++ GV++ E+
Sbjct: 214 GYNKAVDWWALGVLIYEM 231
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 82/200 (41%), Gaps = 24/200 (12%)
Query: 332 LGTGAYGTV-----------YAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHP 380
LG G +G V YA K+ + + K D + + E ++L + HP
Sbjct: 16 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAK-------DEVAHTVTESRVLQNTRHP 68
Query: 381 NLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHS 440
L L V E+ G L HL RER YLHS
Sbjct: 69 FLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERV--FTEERARFYGAEIVSALEYLHS 126
Query: 441 AMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQY 500
+ +RDIK N++LD + K+ DFGL + G+++ + + T GTP YL P+ +
Sbjct: 127 R---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFC-GTPEYLAPEVLED 182
Query: 501 FHLSDKSDVYSFGVVLIEII 520
D + GVV+ E++
Sbjct: 183 NDYGRAVDWWGLGVVMYEMM 202
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 82/200 (41%), Gaps = 24/200 (12%)
Query: 332 LGTGAYGTV-----------YAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHP 380
LG G +G V YA K+ + + K D + + E ++L + HP
Sbjct: 13 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAK-------DEVAHTVTESRVLQNTRHP 65
Query: 381 NLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHS 440
L L V E+ G L HL RER YLHS
Sbjct: 66 FLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERV--FTEERARFYGAEIVSALEYLHS 123
Query: 441 AMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQY 500
+ +RDIK N++LD + K+ DFGL + G+++ + + T GTP YL P+ +
Sbjct: 124 R---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFC-GTPEYLAPEVLED 179
Query: 501 FHLSDKSDVYSFGVVLIEII 520
D + GVV+ E++
Sbjct: 180 NDYGRAVDWWGLGVVMYEMM 199
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 97/222 (43%), Gaps = 36/222 (16%)
Query: 317 KEIEKATSFFSEKHRLGTGAYGTVYAGKLHN-DDWVAIK--------RFRYRDTDS---- 363
KE + S+F + +LG+GAYG V K N AIK + RY D +
Sbjct: 30 KEGKIGESYFKVR-KLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEK 88
Query: 364 -IDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTLCQH-LQRERGSGLPW 421
+++ NEI LL S+ HPN+++L ++ LV EF G L + + R +
Sbjct: 89 FHEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHK---FDE 145
Query: 422 XXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRS----KVADFGLSRLGMT 477
YLH I HRDIK NILL+ N S K+ DFGLS
Sbjct: 146 CDAANIMKQILSGICYLHK---HNIVHRDIKPENILLE-NKNSLLNIKIVDFGLSSFFSK 201
Query: 478 E---SSHISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVL 516
+ + TA P L +Y++ K DV+S GV++
Sbjct: 202 DYKLRDRLGTAYYIAPEVLKKKYNE------KCDVWSCGVIM 237
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 98/218 (44%), Gaps = 21/218 (9%)
Query: 315 PYKEIEKATSFFSEKHRLGTGAYGTVYAGKLHN-DDWVAIKRFRYRDT----DSIDQVMN 369
P +I+ F LG G++G V+ + + + AIK + +D D ++ M
Sbjct: 9 PSLQIKLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALK-KDVVLMDDDVECTMV 67
Query: 370 EIKLLS-SVSHPNLLRLLGCCIEEGEPIL-VYEFMPNGTLCQHLQRERGSGLPWXXXXXX 427
E ++LS + HP L + C + E + V E++ G L H+Q L
Sbjct: 68 EKRVLSLAWEHPFLTHMF-CTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDL--SRATFY 124
Query: 428 XXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQ 487
+LHS I +RD+K NILLD + K+ADFG+ + M + +
Sbjct: 125 AAEIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNEFC- 180
Query: 488 GTPGYLDPQY---HQYFHLSDKSDVYSFGVVLIEIITA 522
GTP Y+ P+ +Y H D +SFGV+L E++
Sbjct: 181 GTPDYIAPEILLGQKYNH---SVDWWSFGVLLYEMLIG 215
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 88/190 (46%), Gaps = 13/190 (6%)
Query: 332 LGTGAYGTV-YAGKLHNDDWVAIKRFRYR---DTDSIDQVMNEIKLLSSVSHPNLLRLLG 387
LG G++G V A VA+K + +D ++ EI L + HP++++L
Sbjct: 22 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 81
Query: 388 CCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIY 447
+ E I+V E+ N +QR++ S Y H I
Sbjct: 82 VIKSKDEIIMVIEYAGNELFDYIVQRDKMSE---QEARRFFQQIISAVEYCHRH---KIV 135
Query: 448 HRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQ-YFHLSDK 506
HRD+K N+LLD + K+ADFGLS + MT+ + + T+ G+P Y P+ + +
Sbjct: 136 HRDLKPENLLLDEHLNVKIADFGLSNI-MTDGNFLKTSC-GSPNYAAPEVISGKLYAGPE 193
Query: 507 SDVYSFGVVL 516
DV+S GV+L
Sbjct: 194 VDVWSCGVIL 203
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 101/220 (45%), Gaps = 33/220 (15%)
Query: 332 LGTGAYGTVYAGKLHNDD------WVAIKRFRYR-DTDSIDQVMNEIKLLSSV-SHPNLL 383
LG+GA+G V + VA+K + + D+ + +M+E+K+++ + SH N++
Sbjct: 53 LGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIV 112
Query: 384 RLLGCCIEEGEPILVYEFMPNGTLCQHL--QRERGSG-------------------LPWX 422
LLG C G L++E+ G L +L +RE+ S L +
Sbjct: 113 NLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFE 172
Query: 423 XXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHI 482
+L HRD+ + N+L+ + K+ DFGL+R M++S+++
Sbjct: 173 DLLCFAYQVAKGMEFLEF---KSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYV 229
Query: 483 STAPQGTP-GYLDPQYHQYFHLSDKSDVYSFGVVLIEIIT 521
P ++ P+ + KSDV+S+G++L EI +
Sbjct: 230 VRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFS 269
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 102/227 (44%), Gaps = 21/227 (9%)
Query: 332 LGTGAYGTVYAGK-LHND-DWVAIKRFRYRDTD-----SIDQVMNEIKLLSSVSHPNLLR 384
+G GAYG V+ + L N +VA+KR R + + S + + ++ L + HPN++R
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 385 LLGCCI-----EEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLH 439
L C E + LV+E + + L +L + G+P +LH
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLH 137
Query: 440 SAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQ 499
S + HRD+K NIL+ + + K+ADFGL+R+ + + S T Y P+
Sbjct: 138 SHR---VVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVV--TLWYRAPEVLL 192
Query: 500 YFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIG 546
+ D++S G + E+ + R S+V+ +D IG
Sbjct: 193 QSSYATPVDLWSVGCIFAEM---FRRKPLFRGSSDVDQLGKILDVIG 236
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 98/215 (45%), Gaps = 15/215 (6%)
Query: 324 SFFSEKHRLGTGAYGTVYAG-KLHNDDWVAIKRFRYRDTDSIDQV-MNEIKLLSSVSHPN 381
F++ ++G G++G V+ G VAIK + + + EI +LS P
Sbjct: 7 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 66
Query: 382 LLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSA 441
+ + G +++ + ++ E++ G+ L+ L YLHS
Sbjct: 67 VTKYYGSYLKDTKLWIIMEYLGGGSALDLLE---PGPLDETQIATILREILKGLDYLHSE 123
Query: 442 MNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYF 501
HRDIK++N+LL + K+ADFG++ +T++ GTP ++ P+ +
Sbjct: 124 KK---IHRDIKAANVLLSEHGEVKLADFGVAG-QLTDTQIKRNTFVGTPFWMAPEVIKQS 179
Query: 502 HLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVN 536
K+D++S G ITA+++ PHSE++
Sbjct: 180 AYDSKADIWSLG------ITAIELARGEPPHSELH 208
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 97/232 (41%), Gaps = 29/232 (12%)
Query: 332 LGTGAYGTVY----AGKLHNDDW--VAIKRFRYR-DTDSIDQVMNEIKLLSSVSHPNLLR 384
+G GA+G V+ G L + + VA+K + D E L++ +PN+++
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVK 114
Query: 385 LLGCCIEEGEPI-LVYEFMPNGTLCQHLQ-------------------RERGSGLPWXXX 424
LLG C G+P+ L++E+M G L + L+ R G P
Sbjct: 115 LLGVC-AVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSC 173
Query: 425 XXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHIST 484
+ HRD+ + N L+ N K+ADFGLSR + + +
Sbjct: 174 AEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKAD 233
Query: 485 APQGTP-GYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEV 535
P ++ P+ Y + +SDV+++GVVL EI + + H EV
Sbjct: 234 GNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEV 285
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 94/200 (47%), Gaps = 19/200 (9%)
Query: 331 RLGTGAYGTVY-AGKLHNDDWVAIKRF----RYRDTDSIDQVMNEIKLLSSVSHPNLLRL 385
+LG G TVY A + VAIK R ++ +++ + E+ S +SH N++ +
Sbjct: 18 KLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKE-ETLKRFEREVHNSSQLSHQNIVSM 76
Query: 386 LGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPP 445
+ E+ LV E++ TL ++++ S P H A +
Sbjct: 77 IDVDEEDDCYYLVMEYIEGPTLSEYIE----SHGPLSVDTAINFTNQILDGIKH-AHDMR 131
Query: 446 IYHRDIKSSNILLDYNYRSKVADFG----LSRLGMTESSHISTAPQGTPGYLDPQYHQYF 501
I HRDIK NIL+D N K+ DFG LS +T+++H+ GT Y P+ +
Sbjct: 132 IVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHV----LGTVQYFSPEQAKGE 187
Query: 502 HLSDKSDVYSFGVVLIEIIT 521
+ +D+YS G+VL E++
Sbjct: 188 ATDECTDIYSIGIVLYEMLV 207
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 88/190 (46%), Gaps = 13/190 (6%)
Query: 332 LGTGAYGTV-YAGKLHNDDWVAIKRFRYR---DTDSIDQVMNEIKLLSSVSHPNLLRLLG 387
LG G++G V A VA+K + +D ++ EI L + HP++++L
Sbjct: 12 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 71
Query: 388 CCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIY 447
+ E I+V E+ N +QR++ S Y H I
Sbjct: 72 VIKSKDEIIMVIEYAGNELFDYIVQRDKMSE---QEARRFFQQIISAVEYCHRH---KIV 125
Query: 448 HRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQ-YFHLSDK 506
HRD+K N+LLD + K+ADFGLS + MT+ + + T+ G+P Y P+ + +
Sbjct: 126 HRDLKPENLLLDEHLNVKIADFGLSNI-MTDGNFLKTS-CGSPNYAAPEVISGKLYAGPE 183
Query: 507 SDVYSFGVVL 516
DV+S GV+L
Sbjct: 184 VDVWSCGVIL 193
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 82/200 (41%), Gaps = 24/200 (12%)
Query: 332 LGTGAYGTV-----------YAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHP 380
LG G +G V YA K+ + + K D + + E ++L + HP
Sbjct: 13 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAK-------DEVAHTVTESRVLQNTRHP 65
Query: 381 NLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHS 440
L L V E+ G L HL RER YLHS
Sbjct: 66 FLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERV--FTEERARFYGAEIVSALEYLHS 123
Query: 441 AMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQY 500
+ +RDIK N++LD + K+ DFGL + G+++ + + T GTP YL P+ +
Sbjct: 124 R---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFC-GTPEYLAPEVLED 179
Query: 501 FHLSDKSDVYSFGVVLIEII 520
D + GVV+ E++
Sbjct: 180 NDYGRAVDWWGLGVVMYEMM 199
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 89/195 (45%), Gaps = 12/195 (6%)
Query: 332 LGTGAYGTVYAGKLHNDD----WVAIKRFRYRDTDSI-DQVMNEIKLLSSVSHPNLLRLL 386
+G G +G V+ G + + VAIK + +DS+ ++ + E + HP++++L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 387 GCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPI 446
G I E ++ E G L LQ + S L YL S
Sbjct: 78 GV-ITENPVWIIMELCTLGELRSFLQVRKFS-LDLASLILYAYQLSTALAYLESKR---F 132
Query: 447 YHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTP-GYLDPQYHQYFHLSD 505
HRDI + N+L+ K+ DFGLSR M +S++ + P ++ P+ + +
Sbjct: 133 VHRDIAARNVLVSATDCVKLGDFGLSRY-MEDSTYYKASKGKLPIKWMAPESINFRRFTS 191
Query: 506 KSDVYSFGVVLIEII 520
SDV+ FGV + EI+
Sbjct: 192 ASDVWMFGVCMWEIL 206
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 85/190 (44%), Gaps = 15/190 (7%)
Query: 360 DTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGL 419
++ S+ ++ E++++ ++HPN+++L E LV E+ G + +L
Sbjct: 46 NSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYL-----VAH 100
Query: 420 PWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTES 479
W + I HRD+K+ N+LLD + K+ADFG S T
Sbjct: 101 GWMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSN-EFTFG 159
Query: 480 SHISTAPQGTPGYLDPQYHQ-YFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLA 538
+ + T G+P Y P+ Q + + DV+S GV+L +++ S P NL
Sbjct: 160 NKLDTFC-GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG------SLPFDGQNLK 212
Query: 539 ALAIDRIGRG 548
L +R+ RG
Sbjct: 213 ELR-ERVLRG 221
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 89/205 (43%), Gaps = 12/205 (5%)
Query: 316 YKEIEKATSFFSEKHRLGTGAYGTV-YAGKLHNDDWVAIKRFRYRDTDSIDQVM-NEIKL 373
+K+ E + + LGTGA+ V A VAIK + + + M NEI +
Sbjct: 10 WKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAV 69
Query: 374 LSSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXX 433
L + HPN++ L G L+ + + G L + E+G
Sbjct: 70 LHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRI-VEKGFYTE-RDASRLIFQVLD 127
Query: 434 XXXYLHSAMNPPIYHRDIKSSNIL---LDYNYRSKVADFGLSRLGMTESSHISTAPQGTP 490
YLH + I HRD+K N+L LD + + ++DFGLS+ M + + + GTP
Sbjct: 128 AVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSK--MEDPGSVLSTACGTP 182
Query: 491 GYLDPQYHQYFHLSDKSDVYSFGVV 515
GY+ P+ S D +S GV+
Sbjct: 183 GYVAPEVLAQKPYSKAVDCWSIGVI 207
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 98/215 (45%), Gaps = 15/215 (6%)
Query: 324 SFFSEKHRLGTGAYGTVYAG-KLHNDDWVAIKRFRYRDTDSIDQV-MNEIKLLSSVSHPN 381
F++ ++G G++G V+ G VAIK + + + EI +LS P
Sbjct: 7 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 66
Query: 382 LLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSA 441
+ + G +++ + ++ E++ G+ L+ L YLHS
Sbjct: 67 VTKYYGSYLKDTKLWIIMEYLGGGSALDLLE---PGPLDETQIATILREILKGLDYLHSE 123
Query: 442 MNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYF 501
HRDIK++N+LL + K+ADFG++ +T++ GTP ++ P+ +
Sbjct: 124 KK---IHRDIKAANVLLSEHGEVKLADFGVAG-QLTDTQIKRNXFVGTPFWMAPEVIKQS 179
Query: 502 HLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVN 536
K+D++S G ITA+++ PHSE++
Sbjct: 180 AYDSKADIWSLG------ITAIELARGEPPHSELH 208
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 127/285 (44%), Gaps = 39/285 (13%)
Query: 332 LGTGAYGTVYAG------KLHNDDWVAIKRFRYRDTDSIDQ---VMNEIKLLSSVSHPNL 382
LG G++G VY G K + VA+K ++ S+ + +NE ++ + ++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVN--ESASLRERIEFLNEASVMKGFTCHHV 82
Query: 383 LRLLGCCIEEGEPILV-YEFMPNGTLCQHL-----QRERGSGLPWXXXXXXXXXXXXXXX 436
+RLLG + +G+P LV E M +G L +L + E G P
Sbjct: 83 VRLLGV-VSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIAD 141
Query: 437 YLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGT--PGYLD 494
+ HRD+ + N ++ +++ K+ DFG++R + E+++ +G ++
Sbjct: 142 GMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTR-DIYETAYYRKGGKGLLPVRWMA 200
Query: 495 PQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEII 554
P+ + + SD++SFGVVL EI + + +P+ ++ + + G +D+
Sbjct: 201 PESLKDGVFTTSSDMWSFGVVLWEITSLAE-----QPYQGLSNEQVLKFVMDGGYLDQ-- 253
Query: 555 DPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELE 599
P P R V +L C F+ MRPT +E+ L+
Sbjct: 254 -PDNCPER----------VTDLMRMCWQFNPKMRPTFLEIVNLLK 287
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 89/206 (43%), Gaps = 26/206 (12%)
Query: 331 RLGTGAYGTVYAGKLHNDDW---------VAIKRFR---YRDTDSIDQVMNEIKLLSSVS 378
+LG G++G V G +W VA+K + +++D + E+ + S+
Sbjct: 19 KLGDGSFGVVRRG-----EWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLD 73
Query: 379 HPNLLRLLGCCIEEGEPI-LVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXY 437
H NL+RL G + P+ +V E P G+L L++ +G L Y
Sbjct: 74 HRNLIRLYGVVLTP--PMKMVTELAPLGSLLDRLRKHQGHFL-LGTLSRYAVQVAEGMGY 130
Query: 438 LHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSR-LGMTESSHISTAPQGTP-GYLDP 495
L S HRD+ + N+LL K+ DFGL R L + ++ + P + P
Sbjct: 131 LESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAP 187
Query: 496 QYHQYFHLSDKSDVYSFGVVLIEIIT 521
+ + S SD + FGV L E+ T
Sbjct: 188 ESLKTRTFSHASDTWMFGVTLWEMFT 213
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 88/190 (46%), Gaps = 13/190 (6%)
Query: 332 LGTGAYGTV-YAGKLHNDDWVAIKRFRYR---DTDSIDQVMNEIKLLSSVSHPNLLRLLG 387
LG G++G V A VA+K + +D ++ EI L + HP++++L
Sbjct: 16 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 75
Query: 388 CCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIY 447
+ E I+V E+ N +QR++ S Y H I
Sbjct: 76 VIKSKDEIIMVIEYAGNELFDYIVQRDKMSE---QEARRFFQQIISAVEYCHRH---KIV 129
Query: 448 HRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQ-YFHLSDK 506
HRD+K N+LLD + K+ADFGLS + MT+ + + T+ G+P Y P+ + +
Sbjct: 130 HRDLKPENLLLDEHLNVKIADFGLSNI-MTDGNFLKTS-CGSPNYAAPEVISGKLYAGPE 187
Query: 507 SDVYSFGVVL 516
DV+S GV+L
Sbjct: 188 VDVWSCGVIL 197
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 74/157 (47%), Gaps = 10/157 (6%)
Query: 369 NEIKLLSSVSHPNLLRLLGCCIEEGEP--ILVYEFMPNGTLCQHLQRERGSGLPWXXXXX 426
EI +L ++ H ++++ GCC ++GE LV E++P G+L +L R +
Sbjct: 65 QEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRH---SIGLAQLLL 121
Query: 427 XXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAP 486
YLH+ HR++ + N+LLD + K+ DFGL++ +
Sbjct: 122 FAQQICEGMAYLHAQH---YIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVRE 178
Query: 487 QGTPG--YLDPQYHQYFHLSDKSDVYSFGVVLIEIIT 521
G + P+ + + SDV+SFGV L E++T
Sbjct: 179 DGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 124/288 (43%), Gaps = 45/288 (15%)
Query: 332 LGTGAYGTVYAG------KLHNDDWVAIKRFRYRDTDSIDQ---VMNEIKLLSSVSHPNL 382
LG G++G VY G K + VA+K ++ S+ + +NE ++ + ++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVN--ESASLRERIEFLNEASVMKGFTCHHV 82
Query: 383 LRLLGCCIEEGEPILV-YEFMPNGTLCQHL-----QRERGSGLPWXXXXXXXXXXXXXXX 436
+RLLG + +G+P LV E M +G L +L + E G P
Sbjct: 83 VRLLGV-VSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIAD 141
Query: 437 YLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQ 496
+ HRD+ + N ++ +++ K+ DFG++R + +G G L +
Sbjct: 142 GMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTR----DIXETDXXRKGGKGLLPVR 197
Query: 497 YHQYFHLSD-----KSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVD 551
+ L D SD++SFGVVL EI + + +P+ ++ + + G +D
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAE-----QPYQGLSNEQVLKFVMDGGYLD 252
Query: 552 EIIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELE 599
+ P P R V +L C F+ +MRPT +E+ L+
Sbjct: 253 Q---PDNCPER----------VTDLMRMCWQFNPNMRPTFLEIVNLLK 287
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 89/206 (43%), Gaps = 26/206 (12%)
Query: 331 RLGTGAYGTVYAGKLHNDDW---------VAIKRFR---YRDTDSIDQVMNEIKLLSSVS 378
+LG G++G V G +W VA+K + +++D + E+ + S+
Sbjct: 25 KLGDGSFGVVRRG-----EWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLD 79
Query: 379 HPNLLRLLGCCIEEGEPI-LVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXY 437
H NL+RL G + P+ +V E P G+L L++ +G L Y
Sbjct: 80 HRNLIRLYGVVLTP--PMKMVTELAPLGSLLDRLRKHQGHFL-LGTLSRYAVQVAEGMGY 136
Query: 438 LHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSR-LGMTESSHISTAPQGTP-GYLDP 495
L S HRD+ + N+LL K+ DFGL R L + ++ + P + P
Sbjct: 137 LESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAP 193
Query: 496 QYHQYFHLSDKSDVYSFGVVLIEIIT 521
+ + S SD + FGV L E+ T
Sbjct: 194 ESLKTRTFSHASDTWMFGVTLWEMFT 219
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 93/201 (46%), Gaps = 21/201 (10%)
Query: 332 LGTGAYGTVYAGKLHN-DDWVAIKRFRYRDT----DSIDQVMNEIKLLS-SVSHPNLLRL 385
LG G++G V+ + + + AIK + +D D ++ M E ++LS + HP L +
Sbjct: 25 LGKGSFGKVFLAEFKKTNQFFAIKALK-KDVVLMDDDVECTMVEKRVLSLAWEHPFLTHM 83
Query: 386 LGCCIEEGEPIL-VYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNP 444
C + E + V E++ G L H+Q L +LHS
Sbjct: 84 F-CTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDL--SRATFYAAEIILGLQFLHSK--- 137
Query: 445 PIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQY---HQYF 501
I +RD+K NILLD + K+ADFG+ + M + + GTP Y+ P+ +Y
Sbjct: 138 GIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXFC-GTPDYIAPEILLGQKYN 196
Query: 502 HLSDKSDVYSFGVVLIEIITA 522
H D +SFGV+L E++
Sbjct: 197 H---SVDWWSFGVLLYEMLIG 214
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 98/215 (45%), Gaps = 15/215 (6%)
Query: 324 SFFSEKHRLGTGAYGTVYAG-KLHNDDWVAIKRFRYRDTDSIDQV-MNEIKLLSSVSHPN 381
F++ ++G G++G V+ G VAIK + + + EI +LS P
Sbjct: 22 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 81
Query: 382 LLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSA 441
+ + G +++ + ++ E++ G+ L+ L YLHS
Sbjct: 82 VTKYYGSYLKDTKLWIIMEYLGGGSALDLLE---PGPLDETQIATILREILKGLDYLHSE 138
Query: 442 MNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYF 501
HRDIK++N+LL + K+ADFG++ +T++ GTP ++ P+ +
Sbjct: 139 KK---IHRDIKAANVLLSEHGEVKLADFGVAG-QLTDTQIKRNXFVGTPFWMAPEVIKQS 194
Query: 502 HLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVN 536
K+D++S G ITA+++ PHSE++
Sbjct: 195 AYDSKADIWSLG------ITAIELARGEPPHSELH 223
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 96/216 (44%), Gaps = 34/216 (15%)
Query: 332 LGTGAYGTVYAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLL---GC 388
+G G YG VY G L ++ VA+K F + + + N I + + H N+ R +
Sbjct: 21 IGRGRYGAVYKGSL-DERPVAVKVFSFANRQNFINEKN-IYRVPLMEHDNIARFIVGDER 78
Query: 389 CIEEG--EPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAM---- 442
+G E +LV E+ PNG+L ++L W YLH+ +
Sbjct: 79 VTADGRMEYLLVMEYYPNGSLXKYLSLHTSD---WVSSCRLAHSVTRGLAYLHTELPRGD 135
Query: 443 --NPPIYHRDIKSSNILLDYNYRSKVADFGLS---------RLGMTESSHISTAPQGTPG 491
P I HRD+ S N+L+ + ++DFGLS R G +++ IS GT
Sbjct: 136 HYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEV--GTIR 193
Query: 492 YLDPQYHQ-YFHLSD------KSDVYSFGVVLIEII 520
Y+ P+ + +L D + D+Y+ G++ EI
Sbjct: 194 YMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIF 229
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 123/288 (42%), Gaps = 45/288 (15%)
Query: 332 LGTGAYGTVYAG------KLHNDDWVAIKRFRYRDTDSIDQ---VMNEIKLLSSVSHPNL 382
LG G++G VY G K + VA+K ++ S+ + +NE ++ + ++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKT--VNESASLRERIEFLNEASVMKGFTCHHV 82
Query: 383 LRLLGCCIEEGEPILV-YEFMPNGTLCQHL-----QRERGSGLPWXXXXXXXXXXXXXXX 436
+RLLG + +G+P LV E M +G L +L + E G P
Sbjct: 83 VRLLGV-VSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIAD 141
Query: 437 YLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQ 496
+ HRD+ + N ++ +++ K+ DFG++R + +G G L +
Sbjct: 142 GMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTR----DIXETDXXRKGGKGLLPVR 197
Query: 497 YHQYFHLSD-----KSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVD 551
+ L D SD++SFGVVL EI + + +P+ ++ + + G +D
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAE-----QPYQGLSNEQVLKFVMDGGYLD 252
Query: 552 EIIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELE 599
+ P P R V +L C F+ MRPT +E+ L+
Sbjct: 253 Q---PDNCPER----------VTDLMRMCWQFNPKMRPTFLEIVNLLK 287
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 106/247 (42%), Gaps = 39/247 (15%)
Query: 299 KRLLCQAAGNSSVPFYPYKEIEKATSFFSEKHRLGTGAYGTVYAGKLHNDDWVAIKRFRY 358
K +LC+ FY K+ EK+ EK R T + N+D ++IK
Sbjct: 46 KIILCEKDN----KFYALKKYEKS---LLEKKRDFTKS----------NNDKISIKS--- 85
Query: 359 RDTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTLCQH------LQ 412
D NE+++++ + + L G E ++YE+M N ++ + L
Sbjct: 86 ----KYDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLD 141
Query: 413 RERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLS 472
+ +P Y+H+ N I HRD+K SNIL+D N R K++DFG S
Sbjct: 142 KNYTCFIPIQVIKCIIKSVLNSFSYIHNEKN--ICHRDVKPSNILMDKNGRVKLSDFGES 199
Query: 473 RLGMTESSHISTAPQGTPGYLDPQY--HQYFHLSDKSDVYSFGVVLIEIITALKVVDFSR 530
+ + +GT ++ P++ ++ + K D++S G+ L + VV FS
Sbjct: 200 EYMVDKK---IKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICL--YVMFYNVVPFSL 254
Query: 531 PHSEVNL 537
S V L
Sbjct: 255 KISLVEL 261
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 81/200 (40%), Gaps = 23/200 (11%)
Query: 332 LGTGAYGTV-----------YAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHP 380
LG G +G V YA K+ + + K D + + E ++L + HP
Sbjct: 17 LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAK-------DEVAHTLTENRVLQNSRHP 69
Query: 381 NLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHS 440
L L V E+ G L HL RER YLHS
Sbjct: 70 FLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERV--FSEDRARFYGAEIVSALDYLHS 127
Query: 441 AMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQY 500
N + +RD+K N++LD + K+ DFGL + G+ + + + GTP YL P+ +
Sbjct: 128 EKN--VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFC-GTPEYLAPEVLED 184
Query: 501 FHLSDKSDVYSFGVVLIEII 520
D + GVV+ E++
Sbjct: 185 NDYGRAVDWWGLGVVMYEMM 204
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 123/288 (42%), Gaps = 45/288 (15%)
Query: 332 LGTGAYGTVYAG------KLHNDDWVAIKRFRYRDTDSIDQ---VMNEIKLLSSVSHPNL 382
LG G++G VY G K + VA+K ++ S+ + +NE ++ + ++
Sbjct: 22 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVN--ESASLRERIEFLNEASVMKGFTCHHV 79
Query: 383 LRLLGCCIEEGEPILV-YEFMPNGTLCQHL-----QRERGSGLPWXXXXXXXXXXXXXXX 436
+RLLG + +G+P LV E M +G L +L + E G P
Sbjct: 80 VRLLGV-VSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIAD 138
Query: 437 YLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQ 496
+ HRD+ + N ++ +++ K+ DFG++R + +G G L +
Sbjct: 139 GMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTR----DIXETDXXRKGGKGLLPVR 194
Query: 497 YHQYFHLSD-----KSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVD 551
+ L D SD++SFGVVL EI + + +P+ ++ + + G +D
Sbjct: 195 WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAE-----QPYQGLSNEQVLKFVMDGGYLD 249
Query: 552 EIIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELE 599
+ P P R V +L C F+ MRPT +E+ L+
Sbjct: 250 Q---PDNCPER----------VTDLMRMCWQFNPKMRPTFLEIVNLLK 284
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 126/285 (44%), Gaps = 39/285 (13%)
Query: 332 LGTGAYGTVYAG------KLHNDDWVAIKRFRYRDTDSIDQ---VMNEIKLLSSVSHPNL 382
LG G++G VY G K + VA+K ++ S+ + +NE ++ + ++
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVN--ESASLRERIEFLNEASVMKGFTCHHV 81
Query: 383 LRLLGCCIEEGEPILV-YEFMPNGTLCQHL-----QRERGSGLPWXXXXXXXXXXXXXXX 436
+RLLG + +G+P LV E M +G L +L + E G P
Sbjct: 82 VRLLGV-VSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIAD 140
Query: 437 YLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGT--PGYLD 494
+ HRD+ + N ++ +++ K+ DFG++R + E+ + +G ++
Sbjct: 141 GMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTR-DIYETDYYRKGGKGLLPVRWMA 199
Query: 495 PQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEII 554
P+ + + SD++SFGVVL EI + + +P+ ++ + + G +D+
Sbjct: 200 PESLKDGVFTTSSDMWSFGVVLWEITSLAE-----QPYQGLSNEQVLKFVMDGGYLDQ-- 252
Query: 555 DPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELE 599
P P R V +L C F+ MRPT +E+ L+
Sbjct: 253 -PDNCPER----------VTDLMRMCWQFNPKMRPTFLEIVNLLK 286
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 89/206 (43%), Gaps = 26/206 (12%)
Query: 331 RLGTGAYGTVYAGKLHNDDW---------VAIKRFR---YRDTDSIDQVMNEIKLLSSVS 378
+LG G++G V G +W VA+K + +++D + E+ + S+
Sbjct: 19 KLGDGSFGVVRRG-----EWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLD 73
Query: 379 HPNLLRLLGCCIEEGEPI-LVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXY 437
H NL+RL G + P+ +V E P G+L L++ +G L Y
Sbjct: 74 HRNLIRLYGVVLTP--PMKMVTELAPLGSLLDRLRKHQGHFL-LGTLSRYAVQVAEGMGY 130
Query: 438 LHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSR-LGMTESSHISTAPQGTP-GYLDP 495
L S HRD+ + N+LL K+ DFGL R L + ++ + P + P
Sbjct: 131 LESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAP 187
Query: 496 QYHQYFHLSDKSDVYSFGVVLIEIIT 521
+ + S SD + FGV L E+ T
Sbjct: 188 ESLKTRTFSHASDTWMFGVTLWEMFT 213
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 89/206 (43%), Gaps = 26/206 (12%)
Query: 331 RLGTGAYGTVYAGKLHNDDW---------VAIKRFR---YRDTDSIDQVMNEIKLLSSVS 378
+LG G++G V G +W VA+K + +++D + E+ + S+
Sbjct: 15 KLGDGSFGVVRRG-----EWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLD 69
Query: 379 HPNLLRLLGCCIEEGEPI-LVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXY 437
H NL+RL G + P+ +V E P G+L L++ +G L Y
Sbjct: 70 HRNLIRLYGVVLTP--PMKMVTELAPLGSLLDRLRKHQGHFL-LGTLSRYAVQVAEGMGY 126
Query: 438 LHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSR-LGMTESSHISTAPQGTP-GYLDP 495
L S HRD+ + N+LL K+ DFGL R L + ++ + P + P
Sbjct: 127 LESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAP 183
Query: 496 QYHQYFHLSDKSDVYSFGVVLIEIIT 521
+ + S SD + FGV L E+ T
Sbjct: 184 ESLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 88/198 (44%), Gaps = 13/198 (6%)
Query: 326 FSEKHRLGTGAYGTVYAGK-LHNDDWVAIK---RFRYRDTDSIDQVMNEIKLLSSVSHPN 381
F LGTG++G V K + + A+K + + I+ +NE ++L +V+ P
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPF 102
Query: 382 LLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSA 441
L++L + +V E+ P G + HL+R P YLHS
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLHSL 160
Query: 442 MNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYF 501
+ +RD+K N+++D KV DFGL++ + + GTP YL P+
Sbjct: 161 ---DLIYRDLKPENLMIDQQGYIKVTDFGLAKRVKGRTWXLC----GTPEYLAPEIILSK 213
Query: 502 HLSDKSDVYSFGVVLIEI 519
+ D ++ GV++ E+
Sbjct: 214 GYNKAVDWWALGVLIYEM 231
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 89/206 (43%), Gaps = 26/206 (12%)
Query: 331 RLGTGAYGTVYAGKLHNDDW---------VAIKRFR---YRDTDSIDQVMNEIKLLSSVS 378
+LG G++G V G +W VA+K + +++D + E+ + S+
Sbjct: 15 KLGDGSFGVVRRG-----EWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLD 69
Query: 379 HPNLLRLLGCCIEEGEPI-LVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXY 437
H NL+RL G + P+ +V E P G+L L++ +G L Y
Sbjct: 70 HRNLIRLYGVVLTP--PMKMVTELAPLGSLLDRLRKHQGHFL-LGTLSRYAVQVAEGMGY 126
Query: 438 LHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSR-LGMTESSHISTAPQGTP-GYLDP 495
L S HRD+ + N+LL K+ DFGL R L + ++ + P + P
Sbjct: 127 LESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAP 183
Query: 496 QYHQYFHLSDKSDVYSFGVVLIEIIT 521
+ + S SD + FGV L E+ T
Sbjct: 184 ESLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 81/200 (40%), Gaps = 23/200 (11%)
Query: 332 LGTGAYGTV-----------YAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHP 380
LG G +G V YA K+ + + K D + + E ++L + HP
Sbjct: 16 LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAK-------DEVAHTLTENRVLQNSRHP 68
Query: 381 NLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHS 440
L L V E+ G L HL RER YLHS
Sbjct: 69 FLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERV--FSEDRARFYGAEIVSALDYLHS 126
Query: 441 AMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQY 500
N + +RD+K N++LD + K+ DFGL + G+ + + + GTP YL P+ +
Sbjct: 127 EKN--VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFC-GTPEYLAPEVLED 183
Query: 501 FHLSDKSDVYSFGVVLIEII 520
D + GVV+ E++
Sbjct: 184 NDYGRAVDWWGLGVVMYEMM 203
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 126/285 (44%), Gaps = 39/285 (13%)
Query: 332 LGTGAYGTVYAG------KLHNDDWVAIKRFRYRDTDSIDQ---VMNEIKLLSSVSHPNL 382
LG G++G VY G K + VA+K ++ S+ + +NE ++ + ++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVN--ESASLRERIEFLNEASVMKGFTCHHV 82
Query: 383 LRLLGCCIEEGEPILV-YEFMPNGTLCQHL-----QRERGSGLPWXXXXXXXXXXXXXXX 436
+RLLG + +G+P LV E M +G L +L + E G P
Sbjct: 83 VRLLGV-VSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIAD 141
Query: 437 YLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGT--PGYLD 494
+ HRD+ + N ++ +++ K+ DFG++R + E+ + +G ++
Sbjct: 142 GMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTR-DIYETDYYRKGGKGLLPVRWMA 200
Query: 495 PQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEII 554
P+ + + SD++SFGVVL EI + + +P+ ++ + + G +D+
Sbjct: 201 PESLKDGVFTTSSDMWSFGVVLWEITSLAE-----QPYQGLSNEQVLKFVMDGGYLDQ-- 253
Query: 555 DPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELE 599
P P R V +L C F+ MRPT +E+ L+
Sbjct: 254 -PDNCPER----------VTDLMRMCWQFNPKMRPTFLEIVNLLK 287
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 100/233 (42%), Gaps = 20/233 (8%)
Query: 302 LCQAAGNSSVPFYPYKEIEKATSFFSEKHRLGTGAYGTVYAGKLHNDDWVAIKRFRYRDT 361
+ + S +P + I + + +G G +G V+ GK ++ VA+K F R+
Sbjct: 10 MTTSGSGSGLPLLVQRTIARTIVL---QESIGKGRFGEVWRGKWRGEE-VAVKIFSSREE 65
Query: 362 DSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEG----EPILVYEFMPNGTLCQHLQRERGS 417
S + EI + H N+L + ++ + LV ++ +G+L +L R +
Sbjct: 66 RSWFR-EAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVT 124
Query: 418 --GLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLG 475
G+ + + P I HRD+KS NIL+ N +AD GL+
Sbjct: 125 VEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRH 184
Query: 476 MTESSHISTAPQ---GTPGYLDPQY------HQYFHLSDKSDVYSFGVVLIEI 519
+ + I AP GT Y+ P+ ++F ++D+Y+ G+V EI
Sbjct: 185 DSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 237
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 91/203 (44%), Gaps = 17/203 (8%)
Query: 332 LGTGAYGTVYAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIE 391
+G G +G V+ GK ++ VA+K F R+ S + EI + H N+L + +
Sbjct: 17 IGKGRFGEVWRGKWRGEE-VAVKIFSSREERSWFR-EAEIYQTVMLRHENILGFIAADNK 74
Query: 392 EG----EPILVYEFMPNGTLCQHLQRERGS--GLPWXXXXXXXXXXXXXXXYLHSAMNPP 445
+ + LV ++ +G+L +L R + G+ + + P
Sbjct: 75 DNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPA 134
Query: 446 IYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQ---GTPGYLDPQY----- 497
I HRD+KS NIL+ N +AD GL+ + + I AP GT Y+ P+
Sbjct: 135 IAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSI 194
Query: 498 -HQYFHLSDKSDVYSFGVVLIEI 519
++F ++D+Y+ G+V EI
Sbjct: 195 NMKHFESFKRADIYAMGLVFWEI 217
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 81/200 (40%), Gaps = 23/200 (11%)
Query: 332 LGTGAYGTV-----------YAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHP 380
LG G +G V YA K+ + + K D + + E ++L + HP
Sbjct: 18 LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAK-------DEVAHTLTENRVLQNSRHP 70
Query: 381 NLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHS 440
L L V E+ G L HL RER YLHS
Sbjct: 71 FLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERV--FSEDRARFYGAEIVSALDYLHS 128
Query: 441 AMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQY 500
N + +RD+K N++LD + K+ DFGL + G+ + + + GTP YL P+ +
Sbjct: 129 EKN--VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFC-GTPEYLAPEVLED 185
Query: 501 FHLSDKSDVYSFGVVLIEII 520
D + GVV+ E++
Sbjct: 186 NDYGRAVDWWGLGVVMYEMM 205
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 98/197 (49%), Gaps = 12/197 (6%)
Query: 331 RLGTGAYGTVYAGK-LHNDDWVAIKRFRYR-DTDSIDQVMNEIKL-LSSVSHPNLLRLLG 387
LG GAYG V + + + +A+KR R ++ +++ ++ + + +V P + G
Sbjct: 58 ELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYG 117
Query: 388 CCIEEGEPILVYEFMPNGTLCQHLQR--ERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPP 445
EG+ + E M + +L + ++ ++G +P +LHS ++
Sbjct: 118 ALFREGDVWICMELM-DTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS-- 174
Query: 446 IYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTA---PQGTPGYLDPQYHQYFH 502
+ HRD+K SN+L++ + K+ DFG+S + + A P P ++P+ +Q +
Sbjct: 175 VIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKTIDAGCKPYMAPERINPELNQKGY 234
Query: 503 LSDKSDVYSFGVVLIEI 519
S KSD++S G+ +IE+
Sbjct: 235 -SVKSDIWSLGITMIEL 250
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 91/203 (44%), Gaps = 17/203 (8%)
Query: 332 LGTGAYGTVYAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIE 391
+G G +G V+ GK ++ VA+K F R+ S + EI + H N+L + +
Sbjct: 14 IGKGRFGEVWRGKWRGEE-VAVKIFSSREERSWFR-EAEIYQTVMLRHENILGFIAADNK 71
Query: 392 EG----EPILVYEFMPNGTLCQHLQRERGS--GLPWXXXXXXXXXXXXXXXYLHSAMNPP 445
+ + LV ++ +G+L +L R + G+ + + P
Sbjct: 72 DNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPA 131
Query: 446 IYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQ---GTPGYLDPQY----- 497
I HRD+KS NIL+ N +AD GL+ + + I AP GT Y+ P+
Sbjct: 132 IAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSI 191
Query: 498 -HQYFHLSDKSDVYSFGVVLIEI 519
++F ++D+Y+ G+V EI
Sbjct: 192 NMKHFESFKRADIYAMGLVFWEI 214
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 86/190 (45%), Gaps = 15/190 (7%)
Query: 360 DTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGL 419
++ S+ ++ E++++ ++HPN+++L E LV E+ G + +L +
Sbjct: 53 NSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAH--GRM 110
Query: 420 PWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTES 479
Y H I HRD+K+ N+LLD + K+ADFG S T
Sbjct: 111 KEKEARAKFRQIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSN-EFTFG 166
Query: 480 SHISTAPQGTPGYLDPQYHQ-YFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLA 538
+ + T G+P Y P+ Q + + DV+S GV+L +++ S P NL
Sbjct: 167 NKLDTFC-GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG------SLPFDGQNLK 219
Query: 539 ALAIDRIGRG 548
L +R+ RG
Sbjct: 220 ELR-ERVLRG 228
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 86/190 (45%), Gaps = 15/190 (7%)
Query: 360 DTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGL 419
++ S+ ++ E++++ ++HPN+++L E LV E+ G + +L +
Sbjct: 53 NSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAH--GRM 110
Query: 420 PWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTES 479
Y H I HRD+K+ N+LLD + K+ADFG S T
Sbjct: 111 KEKEARAKFRQIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSN-EFTFG 166
Query: 480 SHISTAPQGTPGYLDPQYHQ-YFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLA 538
+ + T G+P Y P+ Q + + DV+S GV+L +++ S P NL
Sbjct: 167 NKLDTFC-GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG------SLPFDGQNLK 219
Query: 539 ALAIDRIGRG 548
L +R+ RG
Sbjct: 220 ELR-ERVLRG 228
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 86/190 (45%), Gaps = 15/190 (7%)
Query: 360 DTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGL 419
++ S+ ++ E++++ ++HPN+++L E LV E+ G + +L +
Sbjct: 53 NSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAH--GRM 110
Query: 420 PWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTES 479
Y H I HRD+K+ N+LLD + K+ADFG S T
Sbjct: 111 KEKEARAKFRQIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSN-EFTFG 166
Query: 480 SHISTAPQGTPGYLDPQYHQ-YFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLA 538
+ + T G+P Y P+ Q + + DV+S GV+L +++ S P NL
Sbjct: 167 NKLDTFC-GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG------SLPFDGQNLK 219
Query: 539 ALAIDRIGRG 548
L +R+ RG
Sbjct: 220 ELR-ERVLRG 228
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 86/201 (42%), Gaps = 18/201 (8%)
Query: 332 LGTGAYGTVYAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSH-PNLLRLLGCCI 390
+G G YG VY G+ +A + D +++ EI +L SH N+ G I
Sbjct: 32 VGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFI 91
Query: 391 EEGEP------ILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNP 444
++ P LV EF G++ ++ +G+ L +LH
Sbjct: 92 KKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQH--- 148
Query: 445 PIYHRDIKSSNILLDYNYRSKVADFGLS-RLGMTESSHISTAPQGTPGYLDPQYHQYFHL 503
+ HRDIK N+LL N K+ DFG+S +L T + GTP ++ P+
Sbjct: 149 KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFI--GTPYWMAPEVIACDEN 206
Query: 504 SD-----KSDVYSFGVVLIEI 519
D KSD++S G+ IE+
Sbjct: 207 PDATYDFKSDLWSLGITAIEM 227
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 91/203 (44%), Gaps = 17/203 (8%)
Query: 332 LGTGAYGTVYAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIE 391
+G G +G V+ GK ++ VA+K F R+ S + EI + H N+L + +
Sbjct: 12 IGKGRFGEVWRGKWRGEE-VAVKIFSSREERSWFR-EAEIYQTVMLRHENILGFIAADNK 69
Query: 392 EG----EPILVYEFMPNGTLCQHLQRERGS--GLPWXXXXXXXXXXXXXXXYLHSAMNPP 445
+ + LV ++ +G+L +L R + G+ + + P
Sbjct: 70 DNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPA 129
Query: 446 IYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQ---GTPGYLDPQY----- 497
I HRD+KS NIL+ N +AD GL+ + + I AP GT Y+ P+
Sbjct: 130 IAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSI 189
Query: 498 -HQYFHLSDKSDVYSFGVVLIEI 519
++F ++D+Y+ G+V EI
Sbjct: 190 NMKHFESFKRADIYAMGLVFWEI 212
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 91/203 (44%), Gaps = 17/203 (8%)
Query: 332 LGTGAYGTVYAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIE 391
+G G +G V+ GK ++ VA+K F R+ S + EI + H N+L + +
Sbjct: 11 IGKGRFGEVWRGKWRGEE-VAVKIFSSREERSWFR-EAEIYQTVMLRHENILGFIAADNK 68
Query: 392 EG----EPILVYEFMPNGTLCQHLQRERGS--GLPWXXXXXXXXXXXXXXXYLHSAMNPP 445
+ + LV ++ +G+L +L R + G+ + + P
Sbjct: 69 DNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPA 128
Query: 446 IYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQ---GTPGYLDPQY----- 497
I HRD+KS NIL+ N +AD GL+ + + I AP GT Y+ P+
Sbjct: 129 IAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSI 188
Query: 498 -HQYFHLSDKSDVYSFGVVLIEI 519
++F ++D+Y+ G+V EI
Sbjct: 189 NMKHFESFKRADIYAMGLVFWEI 211
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 85/198 (42%), Gaps = 8/198 (4%)
Query: 324 SFFSEKHRLGTGAYGTVYAGKLHND-DWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNL 382
S+ ++G G+ G V + + VA+K+ R + + NE+ ++ H N+
Sbjct: 20 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENV 79
Query: 383 LRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAM 442
+ + + E +V EF+ G L + R + LH+
Sbjct: 80 VEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNE---EQIAAVCLAVLQALSVLHAQ- 135
Query: 443 NPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFH 502
+ HRDIKS +ILL ++ R K++DFG E GTP ++ P+
Sbjct: 136 --GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXL-VGTPYWMAPELISRLP 192
Query: 503 LSDKSDVYSFGVVLIEII 520
+ D++S G+++IE++
Sbjct: 193 YGPEVDIWSLGIMVIEMV 210
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 100/233 (42%), Gaps = 20/233 (8%)
Query: 302 LCQAAGNSSVPFYPYKEIEKATSFFSEKHRLGTGAYGTVYAGKLHNDDWVAIKRFRYRDT 361
+ + S +P + I + + +G G +G V+ GK ++ VA+K F R+
Sbjct: 23 MTTSGSGSGLPLLVQRTIARTIVL---QESIGKGRFGEVWRGKWRGEE-VAVKIFSSREE 78
Query: 362 DSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEG----EPILVYEFMPNGTLCQHLQRERGS 417
S + EI + H N+L + ++ + LV ++ +G+L +L R +
Sbjct: 79 RSWFR-EAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVT 137
Query: 418 --GLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLG 475
G+ + + P I HRD+KS NIL+ N +AD GL+
Sbjct: 138 VEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRH 197
Query: 476 MTESSHISTAPQ---GTPGYLDPQY------HQYFHLSDKSDVYSFGVVLIEI 519
+ + I AP GT Y+ P+ ++F ++D+Y+ G+V EI
Sbjct: 198 DSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 250
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 93/204 (45%), Gaps = 24/204 (11%)
Query: 331 RLGTGAYGTVYAGKLHNDD---WVAIKRFRYRDTDSIDQ--VMNEIKLLSSVSHPNLLRL 385
++G G+YG V+ K N D VAIK+F + D + + + EI++L + HPNL+ L
Sbjct: 10 KIGEGSYGVVF--KCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNL 67
Query: 386 LGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPP 445
L + LV+E+ + L + + +RG + H+ +
Sbjct: 68 LEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHNCI--- 124
Query: 446 IYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSH----ISTAPQGTPGYL--DPQYHQ 499
HRD+K NIL+ + K+ DFG +RL S + ++T +P L D QY
Sbjct: 125 --HRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPELLVGDTQY-- 180
Query: 500 YFHLSDKSDVYSFGVVLIEIITAL 523
DV++ G V E+++ +
Sbjct: 181 ----GPPVDVWAIGCVFAELLSGV 200
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 88/205 (42%), Gaps = 12/205 (5%)
Query: 316 YKEIEKATSFFSEKHRLGTGAYGTV-YAGKLHNDDWVAIKRFRYRDTDSIDQVM-NEIKL 373
+K+ E + + LGTGA+ V A VAIK + + M NEI +
Sbjct: 10 WKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAV 69
Query: 374 LSSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXX 433
L + HPN++ L G L+ + + G L + E+G
Sbjct: 70 LHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRI-VEKGFYTE-RDASRLIFQVLD 127
Query: 434 XXXYLHSAMNPPIYHRDIKSSNIL---LDYNYRSKVADFGLSRLGMTESSHISTAPQGTP 490
YLH + I HRD+K N+L LD + + ++DFGLS+ M + + + GTP
Sbjct: 128 AVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSK--MEDPGSVLSTACGTP 182
Query: 491 GYLDPQYHQYFHLSDKSDVYSFGVV 515
GY+ P+ S D +S GV+
Sbjct: 183 GYVAPEVLAQKPYSKAVDCWSIGVI 207
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 85/198 (42%), Gaps = 8/198 (4%)
Query: 324 SFFSEKHRLGTGAYGTVYAGKLHND-DWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNL 382
S+ ++G G+ G V + + VA+K+ R + + NE+ ++ H N+
Sbjct: 31 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENV 90
Query: 383 LRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAM 442
+ + + E +V EF+ G L + R + LH+
Sbjct: 91 VEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNE---EQIAAVCLAVLQALSVLHAQG 147
Query: 443 NPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFH 502
+ HRDIKS +ILL ++ R K++DFG E GTP ++ P+
Sbjct: 148 ---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXL-VGTPYWMAPELISRLP 203
Query: 503 LSDKSDVYSFGVVLIEII 520
+ D++S G+++IE++
Sbjct: 204 YGPEVDIWSLGIMVIEMV 221
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 88/206 (42%), Gaps = 26/206 (12%)
Query: 331 RLGTGAYGTVYAGKLHNDDW---------VAIKRFR---YRDTDSIDQVMNEIKLLSSVS 378
+LG G++G V G +W VA+K + +++D + E+ + S+
Sbjct: 25 KLGDGSFGVVRRG-----EWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLD 79
Query: 379 HPNLLRLLGCCIEEGEPI-LVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXY 437
H NL+RL G + P+ +V E P G+L L++ +G L Y
Sbjct: 80 HRNLIRLYGVVLTP--PMKMVTELAPLGSLLDRLRKHQGHFL-LGTLSRYAVQVAEGMGY 136
Query: 438 LHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSR-LGMTESSHISTAPQGTP-GYLDP 495
L S HRD+ + N+LL K+ DFGL R L + + + P + P
Sbjct: 137 LESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAP 193
Query: 496 QYHQYFHLSDKSDVYSFGVVLIEIIT 521
+ + S SD + FGV L E+ T
Sbjct: 194 ESLKTRTFSHASDTWMFGVTLWEMFT 219
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 85/198 (42%), Gaps = 8/198 (4%)
Query: 324 SFFSEKHRLGTGAYGTVYAGKLHND-DWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNL 382
S+ ++G G+ G V + + VA+K+ R + + NE+ ++ H N+
Sbjct: 29 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENV 88
Query: 383 LRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAM 442
+ + + E +V EF+ G L + R + LH+
Sbjct: 89 VEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNE---EQIAAVCLAVLQALSVLHAQG 145
Query: 443 NPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFH 502
+ HRDIKS +ILL ++ R K++DFG E GTP ++ P+
Sbjct: 146 ---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXL-VGTPYWMAPELISRLP 201
Query: 503 LSDKSDVYSFGVVLIEII 520
+ D++S G+++IE++
Sbjct: 202 YGPEVDIWSLGIMVIEMV 219
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 85/198 (42%), Gaps = 8/198 (4%)
Query: 324 SFFSEKHRLGTGAYGTVYAGKLHND-DWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNL 382
S+ ++G G+ G V + + VA+K+ R + + NE+ ++ H N+
Sbjct: 24 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENV 83
Query: 383 LRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAM 442
+ + + E +V EF+ G L + R + LH+
Sbjct: 84 VEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNE---EQIAAVCLAVLQALSVLHAQ- 139
Query: 443 NPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFH 502
+ HRDIKS +ILL ++ R K++DFG E GTP ++ P+
Sbjct: 140 --GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXL-VGTPYWMAPELISRLP 196
Query: 503 LSDKSDVYSFGVVLIEII 520
+ D++S G+++IE++
Sbjct: 197 YGPEVDIWSLGIMVIEMV 214
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 88/205 (42%), Gaps = 12/205 (5%)
Query: 316 YKEIEKATSFFSEKHRLGTGAYGTV-YAGKLHNDDWVAIKRFRYRDTDSIDQVM-NEIKL 373
+K+ E + + LGTGA+ V A VAIK + + M NEI +
Sbjct: 10 WKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAV 69
Query: 374 LSSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXX 433
L + HPN++ L G L+ + + G L + E+G
Sbjct: 70 LHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRI-VEKGFYTE-RDASRLIFQVLD 127
Query: 434 XXXYLHSAMNPPIYHRDIKSSNIL---LDYNYRSKVADFGLSRLGMTESSHISTAPQGTP 490
YLH + I HRD+K N+L LD + + ++DFGLS+ M + + + GTP
Sbjct: 128 AVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSK--MEDPGSVLSTACGTP 182
Query: 491 GYLDPQYHQYFHLSDKSDVYSFGVV 515
GY+ P+ S D +S GV+
Sbjct: 183 GYVAPEVLAQKPYSKAVDCWSIGVI 207
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 85/198 (42%), Gaps = 8/198 (4%)
Query: 324 SFFSEKHRLGTGAYGTVYAGKLHND-DWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNL 382
S+ ++G G+ G V + + VA+K+ R + + NE+ ++ H N+
Sbjct: 151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENV 210
Query: 383 LRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAM 442
+ + + E +V EF+ G L + R + LH+
Sbjct: 211 VEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNE---EQIAAVCLAVLQALSVLHAQG 267
Query: 443 NPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFH 502
+ HRDIKS +ILL ++ R K++DFG E GTP ++ P+
Sbjct: 268 ---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXL-VGTPYWMAPELISRLP 323
Query: 503 LSDKSDVYSFGVVLIEII 520
+ D++S G+++IE++
Sbjct: 324 YGPEVDIWSLGIMVIEMV 341
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 88/205 (42%), Gaps = 12/205 (5%)
Query: 316 YKEIEKATSFFSEKHRLGTGAYGTV-YAGKLHNDDWVAIKRFRYRDTDSIDQVM-NEIKL 373
+K+ E + + LGTGA+ V A VAIK + + M NEI +
Sbjct: 10 WKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAV 69
Query: 374 LSSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXX 433
L + HPN++ L G L+ + + G L + E+G
Sbjct: 70 LHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRI-VEKGFYTE-RDASRLIFQVLD 127
Query: 434 XXXYLHSAMNPPIYHRDIKSSNIL---LDYNYRSKVADFGLSRLGMTESSHISTAPQGTP 490
YLH + I HRD+K N+L LD + + ++DFGLS+ M + + + GTP
Sbjct: 128 AVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSK--MEDPGSVLSTACGTP 182
Query: 491 GYLDPQYHQYFHLSDKSDVYSFGVV 515
GY+ P+ S D +S GV+
Sbjct: 183 GYVAPEVLAQKPYSKAVDCWSIGVI 207
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 104/233 (44%), Gaps = 43/233 (18%)
Query: 321 KATSFFSEKHRLGTGAYGTVYAGKLHNDD-WVAIKRFRYRDTDSIDQVMNEIKLLSSVSH 379
+ S F E LG GA+G V + D + AIK+ R+ + + + +++E+ LL+S++H
Sbjct: 3 RYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTE-EKLSTILSEVMLLASLNH 61
Query: 380 PNLLRLLGCCIEEG---EPI----------LVYEFMPNGTL-----CQHLQRERGSGLPW 421
++R +E +P+ + E+ NGTL ++L ++R W
Sbjct: 62 QYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEY--W 119
Query: 422 XXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSR-------- 473
Y+HS I HRD+K NI +D + K+ DFGL++
Sbjct: 120 RLFRQILEALS----YIHSQ---GIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDI 172
Query: 474 -----LGMTESSHISTAPQGTPGYLDPQYHQ-YFHLSDKSDVYSFGVVLIEII 520
+ SS T+ GT Y+ + H ++K D+YS G++ E+I
Sbjct: 173 LKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 88/206 (42%), Gaps = 26/206 (12%)
Query: 331 RLGTGAYGTVYAGKLHNDDW---------VAIKRFR---YRDTDSIDQVMNEIKLLSSVS 378
+LG G++G V G +W VA+K + +++D + E+ + S+
Sbjct: 15 KLGDGSFGVVRRG-----EWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLD 69
Query: 379 HPNLLRLLGCCIEEGEPI-LVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXY 437
H NL+RL G + P+ +V E P G+L L++ +G L Y
Sbjct: 70 HRNLIRLYGVVLTP--PMKMVTELAPLGSLLDRLRKHQGHFL-LGTLSRYAVQVAEGMGY 126
Query: 438 LHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSR-LGMTESSHISTAPQGTP-GYLDP 495
L S HRD+ + N+LL K+ DFGL R L + + + P + P
Sbjct: 127 LESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAP 183
Query: 496 QYHQYFHLSDKSDVYSFGVVLIEIIT 521
+ + S SD + FGV L E+ T
Sbjct: 184 ESLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 89/195 (45%), Gaps = 12/195 (6%)
Query: 332 LGTGAYGTVYAGKLHNDD----WVAIKRFRYRDTDSI-DQVMNEIKLLSSVSHPNLLRLL 386
+G G +G V+ G + + VAIK + +DS+ ++ + E + HP++++L+
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 387 GCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPI 446
G I E ++ E G L LQ + S L YL S
Sbjct: 458 GV-ITENPVWIIMELCTLGELRSFLQVRKFS-LDLASLILYAYQLSTALAYLESKR---F 512
Query: 447 YHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTP-GYLDPQYHQYFHLSD 505
HRDI + N+L+ K+ DFGLSR M +S++ + P ++ P+ + +
Sbjct: 513 VHRDIAARNVLVSATDCVKLGDFGLSRY-MEDSTYYKASKGKLPIKWMAPESINFRRFTS 571
Query: 506 KSDVYSFGVVLIEII 520
SDV+ FGV + EI+
Sbjct: 572 ASDVWMFGVCMWEIL 586
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 85/198 (42%), Gaps = 8/198 (4%)
Query: 324 SFFSEKHRLGTGAYGTVYAGKLHND-DWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNL 382
S+ ++G G+ G V + + VA+K+ R + + NE+ ++ H N+
Sbjct: 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENV 133
Query: 383 LRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAM 442
+ + + E +V EF+ G L + R + LH+
Sbjct: 134 VEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNE---EQIAAVCLAVLQALSVLHAQG 190
Query: 443 NPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFH 502
+ HRDIKS +ILL ++ R K++DFG E GTP ++ P+
Sbjct: 191 ---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXL-VGTPYWMAPELISRLP 246
Query: 503 LSDKSDVYSFGVVLIEII 520
+ D++S G+++IE++
Sbjct: 247 YGPEVDIWSLGIMVIEMV 264
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 106/231 (45%), Gaps = 30/231 (12%)
Query: 305 AAGNSSVP-----FYPYKEIEKATSFFSEKHR----LGTGAYGTVY--AGKLHNDD---W 350
AAG S P P ++ +T+ FS++++ LG G++G V K+ +
Sbjct: 22 AAGTSGGPGDHLHATPGMFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVK 81
Query: 351 VAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTLCQH 410
V KR + TD + ++ E++LL + HPN+++L ++G LV E G L
Sbjct: 82 VISKRQVKQKTDK-ESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDE 140
Query: 411 L-QRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRS---KV 466
+ R+R S + Y+H I HRD+K N+LL+ + ++
Sbjct: 141 IISRKRFSEVD---AARIIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRI 194
Query: 467 ADFGLSRLGMTESSHISTAPQGTPGYLDPQ-YHQYFHLSDKSDVYSFGVVL 516
DFGLS E+S GT Y+ P+ H + +K DV+S GV+L
Sbjct: 195 IDFGLST--HFEASKKMKDKIGTAYYIAPEVLHGTY--DEKCDVWSTGVIL 241
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 106/231 (45%), Gaps = 30/231 (12%)
Query: 305 AAGNSSVP-----FYPYKEIEKATSFFSEKHR----LGTGAYGTVY--AGKLHNDD---W 350
AAG S P P ++ +T+ FS++++ LG G++G V K+ +
Sbjct: 21 AAGTSGGPGDHLHATPGMFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVK 80
Query: 351 VAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTLCQH 410
V KR + TD + ++ E++LL + HPN+++L ++G LV E G L
Sbjct: 81 VISKRQVKQKTDK-ESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDE 139
Query: 411 L-QRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRS---KV 466
+ R+R S + Y+H I HRD+K N+LL+ + ++
Sbjct: 140 IISRKRFSEVD---AARIIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRI 193
Query: 467 ADFGLSRLGMTESSHISTAPQGTPGYLDPQ-YHQYFHLSDKSDVYSFGVVL 516
DFGLS E+S GT Y+ P+ H + +K DV+S GV+L
Sbjct: 194 IDFGLST--HFEASKKMKDKIGTAYYIAPEVLHGTY--DEKCDVWSTGVIL 240
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 90/199 (45%), Gaps = 16/199 (8%)
Query: 332 LGTGAYGTVY-AGKLHNDD---WVAIKRFRYRDTDSIDQVMNEIK--LLSSVSHPNLLRL 385
LG G++G V+ K+ D A+K + D+V +++ +L V+HP +++L
Sbjct: 33 LGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKL 92
Query: 386 LGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPP 445
EG+ L+ +F+ G L L +E +LHS
Sbjct: 93 HYAFQTEGKLYLILDFLRGGDLFTRLSKE--VMFTEEDVKFYLAELALALDHLHSL---G 147
Query: 446 IYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQ--GTPGYLDPQYHQYFHL 503
I +RD+K NILLD K+ DFGLS+ + H A GT Y+ P+
Sbjct: 148 IIYRDLKPENILLDEEGHIKLTDFGLSKESI---DHEKKAYSFCGTVEYMAPEVVNRRGH 204
Query: 504 SDKSDVYSFGVVLIEIITA 522
+ +D +SFGV++ E++T
Sbjct: 205 TQSADWWSFGVLMFEMLTG 223
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 90/199 (45%), Gaps = 16/199 (8%)
Query: 332 LGTGAYGTVY-AGKLHNDD---WVAIKRFRYRDTDSIDQVMNEIK--LLSSVSHPNLLRL 385
LG G++G V+ K+ D A+K + D+V +++ +L V+HP +++L
Sbjct: 32 LGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKL 91
Query: 386 LGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPP 445
EG+ L+ +F+ G L L +E +LHS
Sbjct: 92 HYAFQTEGKLYLILDFLRGGDLFTRLSKE--VMFTEEDVKFYLAELALALDHLHSL---G 146
Query: 446 IYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQ--GTPGYLDPQYHQYFHL 503
I +RD+K NILLD K+ DFGLS+ + H A GT Y+ P+
Sbjct: 147 IIYRDLKPENILLDEEGHIKLTDFGLSKESI---DHEKKAYSFCGTVEYMAPEVVNRRGH 203
Query: 504 SDKSDVYSFGVVLIEIITA 522
+ +D +SFGV++ E++T
Sbjct: 204 TQSADWWSFGVLMFEMLTG 222
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 88/198 (44%), Gaps = 13/198 (6%)
Query: 326 FSEKHRLGTGAYGTVYAGK-LHNDDWVAIK---RFRYRDTDSIDQVMNEIKLLSSVSHPN 381
F LGTG++G V K + + A+K + + I+ +NE ++L +V+ P
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 382 LLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSA 441
L++L + +V E++P G + HL+R P YLHS
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLHSL 160
Query: 442 MNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYF 501
+ +RD+K N+L+D +V DFG ++ + + GTP YL P+
Sbjct: 161 ---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----GTPEYLAPEIILSK 213
Query: 502 HLSDKSDVYSFGVVLIEI 519
+ D ++ GV++ E+
Sbjct: 214 GYNKAVDWWALGVLIYEM 231
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 90/199 (45%), Gaps = 16/199 (8%)
Query: 332 LGTGAYGTVY-AGKLHNDD---WVAIKRFRYRDTDSIDQVMNEIK--LLSSVSHPNLLRL 385
LG G++G V+ K+ D A+K + D+V +++ +L V+HP +++L
Sbjct: 32 LGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKL 91
Query: 386 LGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPP 445
EG+ L+ +F+ G L L +E +LHS
Sbjct: 92 HYAFQTEGKLYLILDFLRGGDLFTRLSKE--VMFTEEDVKFYLAELALALDHLHSL---G 146
Query: 446 IYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQ--GTPGYLDPQYHQYFHL 503
I +RD+K NILLD K+ DFGLS+ + H A GT Y+ P+
Sbjct: 147 IIYRDLKPENILLDEEGHIKLTDFGLSKESI---DHEKKAYSFCGTVEYMAPEVVNRRGH 203
Query: 504 SDKSDVYSFGVVLIEIITA 522
+ +D +SFGV++ E++T
Sbjct: 204 TQSADWWSFGVLMFEMLTG 222
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 88/198 (44%), Gaps = 13/198 (6%)
Query: 326 FSEKHRLGTGAYGTVYAGK-LHNDDWVAIK---RFRYRDTDSIDQVMNEIKLLSSVSHPN 381
F LGTG++G V K + + A+K + + I+ +NE ++L +V+ P
Sbjct: 44 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 382 LLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSA 441
L++L + +V E++P G + HL+R P YLHS
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLHSL 161
Query: 442 MNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYF 501
+ +RD+K N+L+D +V DFG ++ + + GTP YL P+
Sbjct: 162 ---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----GTPEYLAPEIILSK 214
Query: 502 HLSDKSDVYSFGVVLIEI 519
+ D ++ GV++ E+
Sbjct: 215 GYNKAVDWWALGVLIYEM 232
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 91/198 (45%), Gaps = 15/198 (7%)
Query: 332 LGTGAYGTVY-AGKLHNDDWVAIKRFRYRDT----DSIDQVMNEIKLLSSVSHPNLLRLL 386
LG G++G V A + ++ AIK + +D D ++ M E ++L+ + P L L
Sbjct: 27 LGKGSFGKVMLADRKGTEELYAIKILK-KDVVIQDDDVECTMVEKRVLALLDKPPFLTQL 85
Query: 387 GCCIEEGEPI-LVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPP 445
C + + + V E++ G L H+Q+ P +LH
Sbjct: 86 HSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEP--QAVFYAAEISIGLFFLHKR---G 140
Query: 446 IYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQ-GTPGYLDPQYHQYFHLS 504
I +RD+K N++LD K+ADFG+ + M + ++T GTP Y+ P+ Y
Sbjct: 141 IIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDG--VTTREFCGTPDYIAPEIIAYQPYG 198
Query: 505 DKSDVYSFGVVLIEIITA 522
D +++GV+L E++
Sbjct: 199 KSVDWWAYGVLLYEMLAG 216
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 108/257 (42%), Gaps = 34/257 (13%)
Query: 303 CQAAGNSSVPFYPYKEIEKATSFFSEKHRLGTGAYGTVYAGKLHNDDWVAIKRFRYRDTD 362
C + S +PF + + + + +G G YG V+ G ++ VA+K F RD
Sbjct: 19 CTSGSGSGLPFLVQRTVARQITLL---ECVGKGRYGEVWRGSWQGEN-VAVKIFSSRDEK 74
Query: 363 SIDQVMNEIKLLSSV--SHPNLLRLLGCCI----EEGEPILVYEFMPNGTLCQHLQRERG 416
S E +L ++V H N+L + + + L+ + G+L +LQ
Sbjct: 75 SW---FRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQL--- 128
Query: 417 SGLPWXXXXXXXXXXXXXXXYLHSAM-----NPPIYHRDIKSSNILLDYNYRSKVADFGL 471
+ L +LH + P I HRD+KS NIL+ N + +AD GL
Sbjct: 129 TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGL 188
Query: 472 SRLGMTESSHISTA--PQ-GTPGYLDPQYHQY------FHLSDKSDVYSFGVVLIEIITA 522
+ + ++ + P+ GT Y+ P+ F + D+++FG+VL E+
Sbjct: 189 AVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARR 248
Query: 523 LK----VVDFSRPHSEV 535
+ V D+ P +V
Sbjct: 249 MVSNGIVEDYKPPFYDV 265
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 88/198 (44%), Gaps = 13/198 (6%)
Query: 326 FSEKHRLGTGAYGTVYAGK-LHNDDWVAIK---RFRYRDTDSIDQVMNEIKLLSSVSHPN 381
F LGTG++G V K + + A+K + + I+ +NE ++L +V+ P
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 382 LLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSA 441
L++L + +V E++P G + HL+R P YLHS
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLHSL 160
Query: 442 MNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYF 501
+ +RD+K N+L+D +V DFG ++ + + GTP YL P+
Sbjct: 161 ---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----GTPEYLAPEIILSK 213
Query: 502 HLSDKSDVYSFGVVLIEI 519
+ D ++ GV++ E+
Sbjct: 214 GYNKAVDWWALGVLIYEM 231
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 70/151 (46%), Gaps = 8/151 (5%)
Query: 326 FSEKHRLGTGAYGTVYAGK-LHNDDWVAIKRFRYRDTDS--IDQVMNEIKLLSSVSHPNL 382
+ + ++G G YGTV+ K + VA+KR R D D + EI LL + H N+
Sbjct: 4 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNI 63
Query: 383 LRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAM 442
+RL + + LV+EF + L ++ G P + HS
Sbjct: 64 VRLHDVLHSDKKLTLVFEFC-DQDLKKYFDSCNGDLDP-EIVKSFLFQLLKGLGFCHSRN 121
Query: 443 NPPIYHRDIKSSNILLDYNYRSKVADFGLSR 473
+ HRD+K N+L++ N K+ADFGL+R
Sbjct: 122 ---VLHRDLKPQNLLINRNGELKLADFGLAR 149
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 88/198 (44%), Gaps = 13/198 (6%)
Query: 326 FSEKHRLGTGAYGTVYAGK-LHNDDWVAIK---RFRYRDTDSIDQVMNEIKLLSSVSHPN 381
F LGTG++G V K + + A+K + + I+ +NE ++L +V+ P
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 382 LLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSA 441
L++L + +V E++P G + HL+R P YLHS
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLHSL 160
Query: 442 MNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYF 501
+ +RD+K N+L+D +V DFG ++ + + GTP YL P+
Sbjct: 161 ---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----GTPEYLAPEIILSK 213
Query: 502 HLSDKSDVYSFGVVLIEI 519
+ D ++ GV++ E+
Sbjct: 214 GYNKAVDWWALGVLIYEM 231
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 99/197 (50%), Gaps = 12/197 (6%)
Query: 331 RLGTGAYGTVYAGK-LHNDDWVAIKRFRYR-DTDSIDQVMNEIKL-LSSVSHPNLLRLLG 387
LG GAYG V + + + +A+KR R ++ +++ ++ + + +V P + G
Sbjct: 14 ELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYG 73
Query: 388 CCIEEGEPILVYEFMPNGTLCQHLQR--ERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPP 445
EG+ + E M + +L + ++ ++G +P +LHS ++
Sbjct: 74 ALFREGDVWICMELM-DTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS-- 130
Query: 446 IYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTA---PQGTPGYLDPQYHQYFH 502
+ HRD+K SN+L++ + K+ DFG+S + + + A P P ++P+ +Q +
Sbjct: 131 VIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDAGCKPYMAPERINPELNQKGY 190
Query: 503 LSDKSDVYSFGVVLIEI 519
S KSD++S G+ +IE+
Sbjct: 191 -SVKSDIWSLGITMIEL 206
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 87/198 (43%), Gaps = 13/198 (6%)
Query: 326 FSEKHRLGTGAYGTVYAGK-LHNDDWVAIK---RFRYRDTDSIDQVMNEIKLLSSVSHPN 381
F LGTG++G V K + + A+K + + I+ +NE ++L +V+ P
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 382 LLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSA 441
L++L + +V E+ P G + HL+R P YLHS
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLHSL 160
Query: 442 MNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYF 501
+ +RD+K N+++D KV DFG ++ + + GTP YL P+
Sbjct: 161 ---DLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC----GTPEYLAPEIILSK 213
Query: 502 HLSDKSDVYSFGVVLIEI 519
+ D ++ GV++ E+
Sbjct: 214 GYNKAVDWWALGVLIYEM 231
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 127/285 (44%), Gaps = 39/285 (13%)
Query: 332 LGTGAYGTVYAG------KLHNDDWVAIKRFRYRDTDSIDQ---VMNEIKLLSSVSHPNL 382
LG G++G VY G K + VA+K ++ S+ + +NE ++ + ++
Sbjct: 26 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVN--ESASLRERIEFLNEASVMKGFTCHHV 83
Query: 383 LRLLGCCIEEGEPILV-YEFMPNGTLCQHL-----QRERGSGLPWXXXXXXXXXXXXXXX 436
+RLLG + +G+P LV E M +G L +L + E G P
Sbjct: 84 VRLLGV-VSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIAD 142
Query: 437 YLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGT--PGYLD 494
+ HR++ + N ++ +++ K+ DFG++R + E+ + +G ++
Sbjct: 143 GMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMTR-DIYETDYYRKGGKGLLPVRWMA 201
Query: 495 PQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEII 554
P+ + + SD++SFGVVL EI + + +P+ ++ + + G +D+
Sbjct: 202 PESLKDGVFTTSSDMWSFGVVLWEITSLAE-----QPYQGLSNEQVLKFVMDGGYLDQ-- 254
Query: 555 DPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELE 599
P P R V +L C F+ +MRPT +E+ L+
Sbjct: 255 -PDNCPER----------VTDLMRMCWQFNPNMRPTFLEIVNLLK 288
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 88/198 (44%), Gaps = 13/198 (6%)
Query: 326 FSEKHRLGTGAYGTVYAGK-LHNDDWVAIK---RFRYRDTDSIDQVMNEIKLLSSVSHPN 381
F LGTG++G V K + + A+K + + I+ +NE ++L +V+ P
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPF 102
Query: 382 LLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSA 441
L++L + +V E+ P G + HL+R P YLHS
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLHSL 160
Query: 442 MNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYF 501
+ +RD+K N+++D +V DFGL++ + + GTP YL P+
Sbjct: 161 ---DLIYRDLKPENLMIDQQGYIQVTDFGLAKRVKGRTWXLC----GTPEYLAPEIILSK 213
Query: 502 HLSDKSDVYSFGVVLIEI 519
+ D ++ GV++ E+
Sbjct: 214 GYNKAVDWWALGVLIYEM 231
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 127/285 (44%), Gaps = 39/285 (13%)
Query: 332 LGTGAYGTVYAG------KLHNDDWVAIKRFRYRDTDSIDQ---VMNEIKLLSSVSHPNL 382
LG G++G VY G K + VA+K ++ S+ + +NE ++ + ++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVN--ESASLRERIEFLNEASVMKGFTCHHV 82
Query: 383 LRLLGCCIEEGEPILV-YEFMPNGTLCQHL-----QRERGSGLPWXXXXXXXXXXXXXXX 436
+RLLG + +G+P LV E M +G L +L + E G P
Sbjct: 83 VRLLGV-VSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIAD 141
Query: 437 YLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGT--PGYLD 494
+ HR++ + N ++ +++ K+ DFG++R + E+ + +G ++
Sbjct: 142 GMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMTR-DIYETDYYRKGGKGLLPVRWMA 200
Query: 495 PQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEII 554
P+ + + SD++SFGVVL EI + + +P+ ++ + + G +D+
Sbjct: 201 PESLKDGVFTTSSDMWSFGVVLWEITSLAE-----QPYQGLSNEQVLKFVMDGGYLDQ-- 253
Query: 555 DPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELE 599
P P R V +L C F+ +MRPT +E+ L+
Sbjct: 254 -PDNCPER----------VTDLMRMCWQFNPNMRPTFLEIVNLLK 287
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 81/200 (40%), Gaps = 24/200 (12%)
Query: 332 LGTGAYGTV-----------YAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHP 380
LG G +G V YA K+ + + K D + + E ++L + HP
Sbjct: 13 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAK-------DEVAHTVTESRVLQNTRHP 65
Query: 381 NLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHS 440
L L V E+ G L HL RER YLHS
Sbjct: 66 FLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERV--FTEERARFYGAEIVSALEYLHS 123
Query: 441 AMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQY 500
+ +RDIK N++LD + K+ DFGL + G+++ + + GTP YL P+ +
Sbjct: 124 R---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFC-GTPEYLAPEVLED 179
Query: 501 FHLSDKSDVYSFGVVLIEII 520
D + GVV+ E++
Sbjct: 180 NDYGRAVDWWGLGVVMYEMM 199
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 100/212 (47%), Gaps = 25/212 (11%)
Query: 319 IEKATSFFSEKHR----LGTGAYGTVY--AGKLHNDD---WVAIKRFRYRDTDSIDQVMN 369
++ +T+ FS++++ LG G++G V K+ + V KR + TD + ++
Sbjct: 17 VQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDK-ESLLR 75
Query: 370 EIKLLSSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTLCQHL-QRERGSGLPWXXXXXXX 428
E++LL + HPN+++L ++G LV E G L + R+R S +
Sbjct: 76 EVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVD---AARII 132
Query: 429 XXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRS---KVADFGLSRLGMTESSHISTA 485
Y+H I HRD+K N+LL+ + ++ DFGLS E+S
Sbjct: 133 RQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLST--HFEASKKMKD 187
Query: 486 PQGTPGYLDPQ-YHQYFHLSDKSDVYSFGVVL 516
GT Y+ P+ H + +K DV+S GV+L
Sbjct: 188 KIGTAYYIAPEVLHGTY--DEKCDVWSTGVIL 217
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 84/187 (44%), Gaps = 15/187 (8%)
Query: 363 SIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWX 422
S+ ++ E++++ ++HPN+++L E LV E+ G + +L +
Sbjct: 57 SLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAH--GRMKEK 114
Query: 423 XXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHI 482
Y H I HRD+K+ N+LLD + K+ADFG S T + +
Sbjct: 115 EARAKFRQIVSAVQYCHQKY---IVHRDLKAENLLLDGDMNIKIADFGFSN-EFTVGNKL 170
Query: 483 STAPQGTPGYLDPQYHQ-YFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALA 541
T G+P Y P+ Q + + DV+S GV+L +++ S P NL L
Sbjct: 171 DTFC-GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG------SLPFDGQNLKELR 223
Query: 542 IDRIGRG 548
+R+ RG
Sbjct: 224 -ERVLRG 229
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 88/198 (44%), Gaps = 13/198 (6%)
Query: 326 FSEKHRLGTGAYGTVYAGK-LHNDDWVAIK---RFRYRDTDSIDQVMNEIKLLSSVSHPN 381
F LGTG++G V K + + A+K + + I+ +NE ++L +V+ P
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 382 LLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSA 441
L++L + +V E++P G + HL+R P YLHS
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEP--HARFYAAQIVLTFEYLHSL 160
Query: 442 MNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYF 501
+ +RD+K N+L+D +V DFG ++ + + GTP YL P+
Sbjct: 161 ---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----GTPEYLAPEIILSK 213
Query: 502 HLSDKSDVYSFGVVLIEI 519
+ D ++ GV++ E+
Sbjct: 214 GYNKAVDWWALGVLIYEM 231
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 88/198 (44%), Gaps = 13/198 (6%)
Query: 326 FSEKHRLGTGAYGTVYAGK-LHNDDWVAIK---RFRYRDTDSIDQVMNEIKLLSSVSHPN 381
F LGTG++G V K + + A+K + + I+ +NE ++L +V+ P
Sbjct: 44 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 382 LLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSA 441
L++L + +V E++P G + HL+R P YLHS
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEP--HARFYAAQIVLTFEYLHSL 161
Query: 442 MNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYF 501
+ +RD+K N+L+D +V DFG ++ + + GTP YL P+
Sbjct: 162 ---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----GTPEYLAPEIILSK 214
Query: 502 HLSDKSDVYSFGVVLIEI 519
+ D ++ GV++ E+
Sbjct: 215 GYNKAVDWWALGVLIYEM 232
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 88/198 (44%), Gaps = 13/198 (6%)
Query: 326 FSEKHRLGTGAYGTVYAGK-LHNDDWVAIK---RFRYRDTDSIDQVMNEIKLLSSVSHPN 381
F LGTG++G V K + + A+K + + I+ +NE ++L +V+ P
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 382 LLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSA 441
L++L + +V E++P G + HL+R P YLHS
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEP--HARFYAAQIVLTFEYLHSL 160
Query: 442 MNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYF 501
+ +RD+K N+L+D +V DFG ++ + + GTP YL P+
Sbjct: 161 ---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----GTPEYLAPEIILSK 213
Query: 502 HLSDKSDVYSFGVVLIEI 519
+ D ++ GV++ E+
Sbjct: 214 GYNKAVDWWALGVLIYEM 231
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 81/200 (40%), Gaps = 24/200 (12%)
Query: 332 LGTGAYGTV-----------YAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHP 380
LG G +G V YA K+ + + K D + + E ++L + HP
Sbjct: 13 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAK-------DEVAHTVTESRVLQNTRHP 65
Query: 381 NLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHS 440
L L V E+ G L HL RER YLHS
Sbjct: 66 FLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERV--FTEERARFYGAEIVSALEYLHS 123
Query: 441 AMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQY 500
+ +RDIK N++LD + K+ DFGL + G+++ + + GTP YL P+ +
Sbjct: 124 R---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFC-GTPEYLAPEVLED 179
Query: 501 FHLSDKSDVYSFGVVLIEII 520
D + GVV+ E++
Sbjct: 180 NDYGRAVDWWGLGVVMYEMM 199
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 81/200 (40%), Gaps = 24/200 (12%)
Query: 332 LGTGAYGTV-----------YAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHP 380
LG G +G V YA K+ + + K D + + E ++L + HP
Sbjct: 13 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAK-------DEVAHTVTESRVLQNTRHP 65
Query: 381 NLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHS 440
L L V E+ G L HL RER YLHS
Sbjct: 66 FLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERV--FTEERARFYGAEIVSALEYLHS 123
Query: 441 AMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQY 500
+ +RDIK N++LD + K+ DFGL + G+++ + + GTP YL P+ +
Sbjct: 124 R---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFC-GTPEYLAPEVLED 179
Query: 501 FHLSDKSDVYSFGVVLIEII 520
D + GVV+ E++
Sbjct: 180 NDYGRAVDWWGLGVVMYEMM 199
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 87/198 (43%), Gaps = 13/198 (6%)
Query: 326 FSEKHRLGTGAYGTVYAGK-LHNDDWVAIK---RFRYRDTDSIDQVMNEIKLLSSVSHPN 381
F LGTG++G V K + + A+K + + I+ +NE ++L +V+ P
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 382 LLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSA 441
L++L + +V E+ P G + HL+R P YLHS
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEP--HARFYAAQIVLTFEYLHSL 160
Query: 442 MNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYF 501
+ +RD+K N+++D KV DFG ++ + + GTP YL P+
Sbjct: 161 ---DLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC----GTPEYLAPEIILSK 213
Query: 502 HLSDKSDVYSFGVVLIEI 519
+ D ++ GV++ E+
Sbjct: 214 GYNKAVDWWALGVLIYEM 231
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 86/192 (44%), Gaps = 19/192 (9%)
Query: 360 DTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGL 419
++ S+ ++ E++++ ++HPN+++L E LV E+ G + +L +
Sbjct: 53 NSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAH--GRM 110
Query: 420 PWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTES 479
Y H I HRD+K+ N+LLD + K+ADFG S E
Sbjct: 111 KEKEARAKFRQIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFS----NEF 163
Query: 480 SHISTAPQ--GTPGYLDPQYHQ-YFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVN 536
+ + + G+P Y P+ Q + + DV+S GV+L +++ S P N
Sbjct: 164 TFGNKLDEFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG------SLPFDGQN 217
Query: 537 LAALAIDRIGRG 548
L L +R+ RG
Sbjct: 218 LKELR-ERVLRG 228
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 87/203 (42%), Gaps = 9/203 (4%)
Query: 319 IEKATSFFSEKHRLGTGAYGTVYAG-KLHNDDWVAIKRFRYRDTDSIDQV-MNEIKLLSS 376
I F++ R+G G++G V+ G VAIK + + + EI +LS
Sbjct: 18 IADPEELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQ 77
Query: 377 VSHPNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXX 436
+ + G ++ + ++ E++ G+ L R
Sbjct: 78 CDSSYVTKYYGSYLKGSKLWIIMEYLGGGSALDLL---RAGPFDEFQIATMLKEILKGLD 134
Query: 437 YLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQ 496
YLHS HRDIK++N+LL K+ADFG++ +T++ GTP ++ P+
Sbjct: 135 YLHSEKK---IHRDIKAANVLLSEQGDVKLADFGVAG-QLTDTQIKRNTFVGTPFWMAPE 190
Query: 497 YHQYFHLSDKSDVYSFGVVLIEI 519
Q K+D++S G+ IE+
Sbjct: 191 VIQQSAYDSKADIWSLGITAIEL 213
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 88/198 (44%), Gaps = 13/198 (6%)
Query: 326 FSEKHRLGTGAYGTVYAGK-LHNDDWVAIK---RFRYRDTDSIDQVMNEIKLLSSVSHPN 381
F LGTG++G V K + + A+K + + I+ +NE ++L +V+ P
Sbjct: 44 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 382 LLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSA 441
L++L + +V E++P G + HL+R P YLHS
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLHSL 161
Query: 442 MNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYF 501
+ +RD+K N+L+D +V DFG ++ + + GTP YL P+
Sbjct: 162 ---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLC----GTPEYLAPEIILSK 214
Query: 502 HLSDKSDVYSFGVVLIEI 519
+ D ++ GV++ E+
Sbjct: 215 GYNKAVDWWALGVLIYEM 232
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 81/200 (40%), Gaps = 24/200 (12%)
Query: 332 LGTGAYGTV-----------YAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHP 380
LG G +G V YA K+ + + K D + + E ++L + HP
Sbjct: 18 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAK-------DEVAHTVTESRVLQNTRHP 70
Query: 381 NLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHS 440
L L V E+ G L HL RER YLHS
Sbjct: 71 FLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERV--FTEERARFYGAEIVSALEYLHS 128
Query: 441 AMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQY 500
+ +RDIK N++LD + K+ DFGL + G+++ + + GTP YL P+ +
Sbjct: 129 R---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFC-GTPEYLAPEVLED 184
Query: 501 FHLSDKSDVYSFGVVLIEII 520
D + GVV+ E++
Sbjct: 185 NDYGRAVDWWGLGVVMYEMM 204
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 85/190 (44%), Gaps = 15/190 (7%)
Query: 360 DTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGL 419
++ S+ ++ E++++ ++HPN+++L E LV E+ G + +L +
Sbjct: 53 NSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAH--GRM 110
Query: 420 PWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTES 479
Y H I HRD+K+ N+LLD + K+ADFG S T
Sbjct: 111 KEKEARAKFRQIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSN-EFTFG 166
Query: 480 SHISTAPQGTPGYLDPQYHQ-YFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLA 538
+ + A G P Y P+ Q + + DV+S GV+L +++ S P NL
Sbjct: 167 NKLD-AFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG------SLPFDGQNLK 219
Query: 539 ALAIDRIGRG 548
L +R+ RG
Sbjct: 220 ELR-ERVLRG 228
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 88/198 (44%), Gaps = 13/198 (6%)
Query: 326 FSEKHRLGTGAYGTVYAGK-LHNDDWVAIK---RFRYRDTDSIDQVMNEIKLLSSVSHPN 381
F LGTG++G V K + + A+K + + I+ +NE ++L +V+ P
Sbjct: 29 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 88
Query: 382 LLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSA 441
L++L + +V E++P G + HL+R P YLHS
Sbjct: 89 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLHSL 146
Query: 442 MNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYF 501
+ +RD+K N+L+D +V DFG ++ + + GTP YL P+
Sbjct: 147 ---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLC----GTPEYLAPEIILSK 199
Query: 502 HLSDKSDVYSFGVVLIEI 519
+ D ++ GV++ E+
Sbjct: 200 GYNKAVDWWALGVLIYEM 217
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 87/197 (44%), Gaps = 11/197 (5%)
Query: 332 LGTGAYGTVYAGKLHNDD-WVAIKRFRYR---DTDSIDQVMNEIK-LLSSVSHPNLLRLL 386
+G G++G V + ++ + A+K + + +M+E LL +V HP L+ L
Sbjct: 46 IGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLH 105
Query: 387 GCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPI 446
+ V +++ G L HLQRER P YLHS +N I
Sbjct: 106 FSFQTADKLYFVLDYINGGELFYHLQRERCFLEP--RARFYAAEIASALGYLHS-LN--I 160
Query: 447 YHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLSDK 506
+RD+K NILLD + DFGL + + +S ST GTP YL P+
Sbjct: 161 VYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTF-CGTPEYLAPEVLHKQPYDRT 219
Query: 507 SDVYSFGVVLIEIITAL 523
D + G VL E++ L
Sbjct: 220 VDWWCLGAVLYEMLYGL 236
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 86/197 (43%), Gaps = 13/197 (6%)
Query: 332 LGTGAYGTVYAGKLHNDDWVAIKRFRYRDT----DSIDQVMNEIKLLSSVSHPNLLRLLG 387
LG G++G V + D + + +D D ++ M E ++L+ P L L
Sbjct: 349 LGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLH 408
Query: 388 CCIEEGEPI-LVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPI 446
C + + + V E++ G L H+Q+ P +L S I
Sbjct: 409 SCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEP--HAVFYAAEIAIGLFFLQSKG---I 463
Query: 447 YHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQ-GTPGYLDPQYHQYFHLSD 505
+RD+K N++LD K+ADFG+ + + + ++T GTP Y+ P+ Y
Sbjct: 464 IYRDLKLDNVMLDSEGHIKIADFGMCKENIWDG--VTTKXFCGTPDYIAPEIIAYQPYGK 521
Query: 506 KSDVYSFGVVLIEIITA 522
D ++FGV+L E++
Sbjct: 522 SVDWWAFGVLLYEMLAG 538
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 90/203 (44%), Gaps = 22/203 (10%)
Query: 332 LGTGAYGTV--YAGKLHND---DWVAIKRFRYRDTDSIDQ----VMNEIKLLSSVSHPNL 382
LG G +G V Y ND + VA+K + D+ Q EI +L ++ H ++
Sbjct: 39 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALK---ADAGPQHRSGWKQEIDILRTLYHEHI 95
Query: 383 LRLLGCCIEEGEP--ILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHS 440
++ GCC + G LV E++P G+L +L R + YLH+
Sbjct: 96 IKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRH---SIGLAQLLLFAQQICEGMAYLHA 152
Query: 441 AMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMT--ESSHISTAPQGTPGYLDPQYH 498
HRD+ + N+LLD + K+ DFGL++ E + + P+
Sbjct: 153 QH---YIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPECL 209
Query: 499 QYFHLSDKSDVYSFGVVLIEIIT 521
+ + SDV+SFGV L E++T
Sbjct: 210 KEYKFYYASDVWSFGVTLYELLT 232
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 100/212 (47%), Gaps = 25/212 (11%)
Query: 319 IEKATSFFSEKHR----LGTGAYGTVY--AGKLHNDD---WVAIKRFRYRDTDSIDQVMN 369
++ +T+ FS++++ LG G++G V K+ + V KR + TD + ++
Sbjct: 23 VQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDK-ESLLR 81
Query: 370 EIKLLSSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTLCQHL-QRERGSGLPWXXXXXXX 428
E++LL + HPN+++L ++G LV E G L + R+R S +
Sbjct: 82 EVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVD---AARII 138
Query: 429 XXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRS---KVADFGLSRLGMTESSHISTA 485
Y+H I HRD+K N+LL+ + ++ DFGLS E+S
Sbjct: 139 RQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLS--THFEASKKMKD 193
Query: 486 PQGTPGYLDPQ-YHQYFHLSDKSDVYSFGVVL 516
GT Y+ P+ H + +K DV+S GV+L
Sbjct: 194 KIGTAYYIAPEVLHGTY--DEKCDVWSTGVIL 223
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 86/198 (43%), Gaps = 13/198 (6%)
Query: 326 FSEKHRLGTGAYGTVYAGK-LHNDDWVAIK---RFRYRDTDSIDQVMNEIKLLSSVSHPN 381
F LGTG++G V K + + A+K + + I+ +NE ++L +V+ P
Sbjct: 44 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 382 LLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSA 441
L +L + +V E+ P G + HL+R P YLHS
Sbjct: 104 LTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLHSL 161
Query: 442 MNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYF 501
+ +RD+K N+++D KV DFG ++ + + GTP YL P+
Sbjct: 162 ---DLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC----GTPEYLAPEIILSK 214
Query: 502 HLSDKSDVYSFGVVLIEI 519
+ D ++ GV++ E+
Sbjct: 215 GYNKAVDWWALGVLIYEM 232
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 90/193 (46%), Gaps = 13/193 (6%)
Query: 329 KHRLGTGAYGTV-YAGKLHNDDWVAIK---RFRYRDTDSIDQVMNEIKLLSSVSHPNLLR 384
+ LG G++G V A VA+K R + +D +V EI L + HP++++
Sbjct: 14 RETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIK 73
Query: 385 LLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNP 444
L + ++V E+ G L ++ ++ + Y H
Sbjct: 74 LYDVITTPTDIVMVIEY-AGGELFDYIVEKKR--MTEDEGRRFFQQIICAIEYCHRH--- 127
Query: 445 PIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQ-YHQYFHL 503
I HRD+K N+LLD N K+ADFGLS + MT+ + + T+ G+P Y P+ + +
Sbjct: 128 KIVHRDLKPENLLLDDNLNVKIADFGLSNI-MTDGNFLKTSC-GSPNYAAPEVINGKLYA 185
Query: 504 SDKSDVYSFGVVL 516
+ DV+S G+VL
Sbjct: 186 GPEVDVWSCGIVL 198
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 85/196 (43%), Gaps = 11/196 (5%)
Query: 332 LGTGAYGTV-YAGKLHNDDWVAIKRFRY-RDTDSIDQVMNEIKLLSSVSHPNLLRLLGCC 389
LG GAYG V A ++ VA+K R D + + EI + ++H N+++ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHR 73
Query: 390 IEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHR 449
E L E+ G L + E G+P YLH I HR
Sbjct: 74 REGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDAQRFFHQLMAGVVYLHGIG---ITHR 128
Query: 450 DIKSSNILLDYNYRSKVADFGLSRL-GMTESSHISTAPQGTPGYLDPQY--HQYFHLSDK 506
DIK N+LLD K++DFGL+ + + GT Y+ P+ + FH ++
Sbjct: 129 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFH-AEP 187
Query: 507 SDVYSFGVVLIEIITA 522
DV+S G+VL ++
Sbjct: 188 VDVWSCGIVLTAMLAG 203
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 86/205 (41%), Gaps = 27/205 (13%)
Query: 326 FSEKHRLGTGAYGTV-----------YAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLL 374
F LGTG++G V YA K+ + V I+ +NE ++L
Sbjct: 44 FERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVV-------KLKQIEHTLNEKRIL 96
Query: 375 SSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXX 434
+V+ P L++L + +V E++P G + HL+R P
Sbjct: 97 QAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP--HARFYAAQIVLT 154
Query: 435 XXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLD 494
YLHS + +RD+K N+L+D +V DFG ++ + + GTP YL
Sbjct: 155 FEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----GTPEYLA 207
Query: 495 PQYHQYFHLSDKSDVYSFGVVLIEI 519
P+ + D ++ GV++ E+
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEM 232
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 86/198 (43%), Gaps = 13/198 (6%)
Query: 326 FSEKHRLGTGAYGTVYAGK-LHNDDWVAIK---RFRYRDTDSIDQVMNEIKLLSSVSHPN 381
F LGTG++G V K + + A+K + + I+ +NE ++L +V+ P
Sbjct: 44 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 382 LLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSA 441
L +L + +V E+ P G + HL+R P YLHS
Sbjct: 104 LTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLHSL 161
Query: 442 MNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYF 501
+ +RD+K N+++D KV DFG ++ + + GTP YL P+
Sbjct: 162 ---DLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC----GTPEYLAPEIILSK 214
Query: 502 HLSDKSDVYSFGVVLIEI 519
+ D ++ GV++ E+
Sbjct: 215 GYNKAVDWWALGVLIYEM 232
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 86/205 (41%), Gaps = 27/205 (13%)
Query: 326 FSEKHRLGTGAYGTV-----------YAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLL 374
F LGTG++G V YA K+ + V I+ +NE ++L
Sbjct: 44 FERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVV-------KLKQIEHTLNEKRIL 96
Query: 375 SSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXX 434
+V+ P L++L + +V E++P G + HL+R P
Sbjct: 97 QAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP--HARFYAAQIVLT 154
Query: 435 XXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLD 494
YLHS + +RD+K N+L+D +V DFG ++ + + GTP YL
Sbjct: 155 FEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----GTPEYLA 207
Query: 495 PQYHQYFHLSDKSDVYSFGVVLIEI 519
P+ + D ++ GV++ E+
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEM 232
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 89/199 (44%), Gaps = 15/199 (7%)
Query: 326 FSEKHRLGTGAYGTVYAGKLHND--DWVAIK---RFRYRDTDSIDQVMNEIKLLSSVSHP 380
F LGTG++G V K H + + A+K + + I+ +NE ++L +V+ P
Sbjct: 43 FERIKTLGTGSFGRVMLVK-HKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 381 NLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHS 440
L++L + +V E++P G + HL+R P YLHS
Sbjct: 102 FLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLHS 159
Query: 441 AMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQY 500
+ +RD+K N+L+D +V DFG ++ + + GTP YL P+
Sbjct: 160 L---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----GTPEYLAPEIILS 212
Query: 501 FHLSDKSDVYSFGVVLIEI 519
+ D ++ GV++ E+
Sbjct: 213 KGYNKAVDWWALGVLIYEM 231
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 85/196 (43%), Gaps = 11/196 (5%)
Query: 332 LGTGAYGTV-YAGKLHNDDWVAIKRFRY-RDTDSIDQVMNEIKLLSSVSHPNLLRLLGCC 389
LG GAYG V A ++ VA+K R D + + EI + ++H N+++ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHR 74
Query: 390 IEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHR 449
E L E+ G L + E G+P YLH I HR
Sbjct: 75 REGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDAQRFFHQLMAGVVYLHGIG---ITHR 129
Query: 450 DIKSSNILLDYNYRSKVADFGLSRL-GMTESSHISTAPQGTPGYLDPQY--HQYFHLSDK 506
DIK N+LLD K++DFGL+ + + GT Y+ P+ + FH ++
Sbjct: 130 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFH-AEP 188
Query: 507 SDVYSFGVVLIEIITA 522
DV+S G+VL ++
Sbjct: 189 VDVWSCGIVLTAMLAG 204
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 83/187 (44%), Gaps = 15/187 (8%)
Query: 363 SIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWX 422
S+ ++ E++++ ++HPN+++L E L+ E+ G + +L +
Sbjct: 54 SLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAH--GRMKEK 111
Query: 423 XXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHI 482
Y H I HRD+K+ N+LLD + K+ADFG S T +
Sbjct: 112 EARSKFRQIVSAVQYCHQKR---IVHRDLKAENLLLDADMNIKIADFGFSN-EFTVGGKL 167
Query: 483 STAPQGTPGYLDPQYHQ-YFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALA 541
T G+P Y P+ Q + + DV+S GV+L +++ S P NL L
Sbjct: 168 DTFC-GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG------SLPFDGQNLKELR 220
Query: 542 IDRIGRG 548
+R+ RG
Sbjct: 221 -ERVLRG 226
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 86/205 (41%), Gaps = 27/205 (13%)
Query: 326 FSEKHRLGTGAYGTV-----------YAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLL 374
F LGTG++G V YA K+ + V I+ +NE ++L
Sbjct: 44 FERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVV-------KLKQIEHTLNEKRIL 96
Query: 375 SSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXX 434
+V+ P L++L + +V E++P G + HL+R P
Sbjct: 97 QAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP--HARFYAAQIVLT 154
Query: 435 XXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLD 494
YLHS + +RD+K N+L+D +V DFG ++ + + GTP YL
Sbjct: 155 FEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----GTPEYLA 207
Query: 495 PQYHQYFHLSDKSDVYSFGVVLIEI 519
P+ + D ++ GV++ E+
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEM 232
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 91/208 (43%), Gaps = 27/208 (12%)
Query: 332 LGTGAYGTVYAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSV--SHPNLLRLLGCC 389
+G G YG V+ G H + VA+K F RD S E ++ ++V H N+L +
Sbjct: 16 VGKGRYGEVWRGLWHGES-VAVKIFSSRDEQSW---FRETEIYNTVLLRHDNILGFIASD 71
Query: 390 I----EEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAM--- 442
+ + L+ + +G+L LQR+ L +LH +
Sbjct: 72 MTSRNSSTQLWLITHYHEHGSLYDFLQRQ---TLEPHLALRLAVSAACGLAHLHVEIFGT 128
Query: 443 --NPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSH--ISTAPQ-GTPGYLDPQY 497
P I HRD KS N+L+ N + +AD GL+ + S + I P+ GT Y+ P+
Sbjct: 129 QGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTKRYMAPEV 188
Query: 498 HQY------FHLSDKSDVYSFGVVLIEI 519
F +D+++FG+VL EI
Sbjct: 189 LDEQIRTDCFESYKWTDIWAFGLVLWEI 216
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 85/205 (41%), Gaps = 27/205 (13%)
Query: 326 FSEKHRLGTGAYGTV-----------YAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLL 374
F LGTG++G V YA K+ + V I+ +NE ++
Sbjct: 44 FERIRTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVV-------KLKQIEHTLNEKRIQ 96
Query: 375 SSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXX 434
+V+ P L++L + +V E+ P G + HL+R P
Sbjct: 97 QAVNFPFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEP--HARFYAAQIVLT 154
Query: 435 XXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLD 494
YLHS + +RD+K N+L+D KVADFG ++ + + GTP YL
Sbjct: 155 FEYLHSL---DLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLC----GTPEYLA 207
Query: 495 PQYHQYFHLSDKSDVYSFGVVLIEI 519
P+ + D ++ GV++ E+
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEM 232
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 85/205 (41%), Gaps = 27/205 (13%)
Query: 326 FSEKHRLGTGAYGTV-----------YAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLL 374
F LGTG++G V YA K+ + V I+ +NE ++L
Sbjct: 44 FERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVV-------KLKQIEHTLNEKRIL 96
Query: 375 SSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXX 434
+V+ P L++L + +V E+ P G + HL+R P
Sbjct: 97 QAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP--HARFYAAQIVLT 154
Query: 435 XXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLD 494
YLHS + +RD+K N+++D KV DFG ++ + + GTP YL
Sbjct: 155 FEYLHSL---DLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC----GTPEYLA 207
Query: 495 PQYHQYFHLSDKSDVYSFGVVLIEI 519
P+ + D ++ GV++ E+
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEM 232
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 86/205 (41%), Gaps = 27/205 (13%)
Query: 326 FSEKHRLGTGAYGTV-----------YAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLL 374
F LGTG++G V YA K+ + V I+ +NE ++L
Sbjct: 64 FERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVV-------KLKQIEHTLNEKRIL 116
Query: 375 SSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXX 434
+V+ P L++L + +V E++P G + HL+R P
Sbjct: 117 QAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP--HARFYAAQIVLT 174
Query: 435 XXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLD 494
YLHS + +RD+K N+L+D +V DFG ++ + + GTP YL
Sbjct: 175 FEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----GTPEYLA 227
Query: 495 PQYHQYFHLSDKSDVYSFGVVLIEI 519
P+ + D ++ GV++ E+
Sbjct: 228 PEIILSKGYNKAVDWWALGVLIYEM 252
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 89/199 (44%), Gaps = 15/199 (7%)
Query: 326 FSEKHRLGTGAYGTVYAGKLHND--DWVAIK---RFRYRDTDSIDQVMNEIKLLSSVSHP 380
F LGTG++G V K H + + A+K + + I+ +NE ++L +V+ P
Sbjct: 43 FERIKTLGTGSFGRVMLVK-HKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 381 NLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHS 440
L++L + +V E++P G + HL+R P YLHS
Sbjct: 102 FLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLHS 159
Query: 441 AMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQY 500
+ +RD+K N+L+D +V DFG ++ + + GTP YL P+
Sbjct: 160 L---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----GTPEYLAPEIILS 212
Query: 501 FHLSDKSDVYSFGVVLIEI 519
+ D ++ GV++ E+
Sbjct: 213 KGYNKAVDWWALGVLIYEM 231
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 89/199 (44%), Gaps = 15/199 (7%)
Query: 326 FSEKHRLGTGAYGTVYAGKLHND--DWVAIK---RFRYRDTDSIDQVMNEIKLLSSVSHP 380
F LGTG++G V K H + + A+K + + I+ +NE ++L +V+ P
Sbjct: 43 FERIKTLGTGSFGRVMLVK-HKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 381 NLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHS 440
L++L + +V E++P G + HL+R P YLHS
Sbjct: 102 FLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLHS 159
Query: 441 AMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQY 500
+ +RD+K N+L+D +V DFG ++ + + GTP YL P+
Sbjct: 160 L---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----GTPEYLAPEIILS 212
Query: 501 FHLSDKSDVYSFGVVLIEI 519
+ D ++ GV++ E+
Sbjct: 213 KGYNKAVDWWALGVLIYEM 231
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 86/205 (41%), Gaps = 27/205 (13%)
Query: 326 FSEKHRLGTGAYGTV-----------YAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLL 374
F LGTG++G V YA K+ + V I+ +NE ++L
Sbjct: 36 FERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVV-------KLKQIEHTLNEKRIL 88
Query: 375 SSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXX 434
+V+ P L++L + +V E++P G + HL+R P
Sbjct: 89 QAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP--HARFYAAQIVLT 146
Query: 435 XXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLD 494
YLHS + +RD+K N+L+D +V DFG ++ + + GTP YL
Sbjct: 147 FEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----GTPEYLA 199
Query: 495 PQYHQYFHLSDKSDVYSFGVVLIEI 519
P+ + D ++ GV++ E+
Sbjct: 200 PEIILSKGYNKAVDWWALGVLIYEM 224
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 87/198 (43%), Gaps = 13/198 (6%)
Query: 326 FSEKHRLGTGAYGTVYAGK-LHNDDWVAIK---RFRYRDTDSIDQVMNEIKLLSSVSHPN 381
F LGTG++G V K + + A+K + + I+ +NE ++L +V+ P
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 382 LLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSA 441
L++L + +V E+ P G + HL+R P YLHS
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLHSL 160
Query: 442 MNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYF 501
+ +RD+K N+++D +V DFG ++ + + GTP YL P+
Sbjct: 161 ---DLIYRDLKPENLMIDQQGYIQVTDFGFAKRVKGRTWXLC----GTPEYLAPEIILSK 213
Query: 502 HLSDKSDVYSFGVVLIEI 519
+ D ++ GV++ E+
Sbjct: 214 GYNKAVDWWALGVLIYEM 231
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 86/198 (43%), Gaps = 13/198 (6%)
Query: 326 FSEKHRLGTGAYGTVYAGK-LHNDDWVAIK---RFRYRDTDSIDQVMNEIKLLSSVSHPN 381
F LGTG++G V K + + A+K + + I+ +NE ++L +V+ P
Sbjct: 44 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 382 LLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSA 441
L +L + +V E+ P G + HL+R P YLHS
Sbjct: 104 LTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEP--HARFYAAQIVLTFEYLHSL 161
Query: 442 MNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYF 501
+ +RD+K N+++D KV DFG ++ + + GTP YL P+
Sbjct: 162 ---DLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC----GTPEYLAPEIILSK 214
Query: 502 HLSDKSDVYSFGVVLIEI 519
+ D ++ GV++ E+
Sbjct: 215 GYNKAVDWWALGVLIYEM 232
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 92/212 (43%), Gaps = 33/212 (15%)
Query: 321 KATSFFSEKHRLGTGAYGTV-----------YAGKLHNDDWVAIKRFRYRDTDSIDQVMN 369
K + + K LG GA+ V +A K+ N K+ RD +++
Sbjct: 26 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIIN-----TKKLSARDFQKLER--- 77
Query: 370 EIKLLSSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTLCQHL-QRERGSGLPWXXXXXXX 428
E ++ + HPN++RL EE LV++ + G L + + RE S
Sbjct: 78 EARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSE---ADASHCI 134
Query: 429 XXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRS---KVADFGLS-RLGMTESSHIST 484
Y HS I HR++K N+LL + K+ADFGL+ + +E+ H
Sbjct: 135 QQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH--- 188
Query: 485 APQGTPGYLDPQYHQYFHLSDKSDVYSFGVVL 516
GTPGYL P+ + S D+++ GV+L
Sbjct: 189 GFAGTPGYLSPEVLKKDPYSKPVDIWACGVIL 220
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 86/205 (41%), Gaps = 27/205 (13%)
Query: 326 FSEKHRLGTGAYGTV-----------YAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLL 374
F LGTG++G V YA K+ + V I+ +NE ++L
Sbjct: 36 FERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVV-------KLKQIEHTLNEKRIL 88
Query: 375 SSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXX 434
+V+ P L++L + +V E++P G + HL+R P
Sbjct: 89 QAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEP--HARFYAAQIVLT 146
Query: 435 XXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLD 494
YLHS + +RD+K N+L+D +V DFG ++ + + GTP YL
Sbjct: 147 FEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----GTPEYLA 199
Query: 495 PQYHQYFHLSDKSDVYSFGVVLIEI 519
P+ + D ++ GV++ E+
Sbjct: 200 PEIILSKGYNKAVDWWALGVLIYEM 224
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 92/212 (43%), Gaps = 33/212 (15%)
Query: 321 KATSFFSEKHRLGTGAYGTV-----------YAGKLHNDDWVAIKRFRYRDTDSIDQVMN 369
K + + K LG GA+ V +A K+ N K+ RD +++
Sbjct: 3 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIIN-----TKKLSARDFQKLER--- 54
Query: 370 EIKLLSSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTLCQHL-QRERGSGLPWXXXXXXX 428
E ++ + HPN++RL EE LV++ + G L + + RE S
Sbjct: 55 EARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSE---ADASHCI 111
Query: 429 XXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRS---KVADFGLS-RLGMTESSHIST 484
Y HS I HR++K N+LL + K+ADFGL+ + +E+ H
Sbjct: 112 QQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH--- 165
Query: 485 APQGTPGYLDPQYHQYFHLSDKSDVYSFGVVL 516
GTPGYL P+ + S D+++ GV+L
Sbjct: 166 GFAGTPGYLSPEVLKKDPYSKPVDIWACGVIL 197
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 74/157 (47%), Gaps = 10/157 (6%)
Query: 369 NEIKLLSSVSHPNLLRLLGCCIEEGEP--ILVYEFMPNGTLCQHLQRERGSGLPWXXXXX 426
EI++L ++ H ++++ GCC ++GE LV E++P G+L +L R GL
Sbjct: 60 REIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPR-HCVGL--AQLLL 116
Query: 427 XXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAP 486
YLH+ HR + + N+LLD + K+ DFGL++ +
Sbjct: 117 FAQQICEGMAYLHAQH---YIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVRE 173
Query: 487 QGTPG--YLDPQYHQYFHLSDKSDVYSFGVVLIEIIT 521
G + P+ + SDV+SFGV L E++T
Sbjct: 174 DGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLT 210
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 89/201 (44%), Gaps = 16/201 (7%)
Query: 323 TSFFSEKHRLGTGAYGTVYAGK---LHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSH 379
+ + +LG+GAYG V + H + + I R T S +++ E+ +L + H
Sbjct: 36 SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDH 95
Query: 380 PNLLRLLGCCIEEGEPILVYEFMPNGTLCQHL-QRERGSGLPWXXXXXXXXXXXXXXXYL 438
PN+++L ++ LV E G L + R + + + YL
Sbjct: 96 PNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVD---AAVIIKQVLSGVTYL 152
Query: 439 HSAMNPPIYHRDIKSSNILLDYNYRS---KVADFGLSRLGMTESSHISTAPQGTPGYLDP 495
H I HRD+K N+LL+ + K+ DFGLS + E+ GT Y+ P
Sbjct: 153 H---KHNIVHRDLKPENLLLESKEKDALIKIVDFGLS--AVFENQKKMKERLGTAYYIAP 207
Query: 496 QYHQYFHLSDKSDVYSFGVVL 516
+ + + +K DV+S GV+L
Sbjct: 208 EVLRKKY-DEKCDVWSIGVIL 227
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 86/197 (43%), Gaps = 13/197 (6%)
Query: 332 LGTGAYGTVYAGKLHNDDWVAIKRFRYRDT----DSIDQVMNEIKLLSSVSHPNLLRLLG 387
LG G++G V + D + + +D D ++ M E ++L+ P L L
Sbjct: 28 LGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLH 87
Query: 388 CCIEEGEPI-LVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPI 446
C + + + V E++ G L H+Q+ P +L S I
Sbjct: 88 SCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEP--HAVFYAAEIAIGLFFLQSK---GI 142
Query: 447 YHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQ-GTPGYLDPQYHQYFHLSD 505
+RD+K N++LD K+ADFG+ + + + ++T GTP Y+ P+ Y
Sbjct: 143 IYRDLKLDNVMLDSEGHIKIADFGMCKENIWDG--VTTKXFCGTPDYIAPEIIAYQPYGK 200
Query: 506 KSDVYSFGVVLIEIITA 522
D ++FGV+L E++
Sbjct: 201 SVDWWAFGVLLYEMLAG 217
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 70/151 (46%), Gaps = 8/151 (5%)
Query: 326 FSEKHRLGTGAYGTVYAGK-LHNDDWVAIKRFRYRDTDS--IDQVMNEIKLLSSVSHPNL 382
+ + ++G G YGTV+ K + VA+KR R D D + EI LL + H N+
Sbjct: 4 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNI 63
Query: 383 LRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAM 442
+RL + + LV+EF + L ++ G P + HS
Sbjct: 64 VRLHDVLHSDKKLTLVFEFC-DQDLKKYFDSCNGDLDP-EIVKSFLFQLLKGLGFCHSRN 121
Query: 443 NPPIYHRDIKSSNILLDYNYRSKVADFGLSR 473
+ HRD+K N+L++ N K+A+FGL+R
Sbjct: 122 ---VLHRDLKPQNLLINRNGELKLANFGLAR 149
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 92/212 (43%), Gaps = 33/212 (15%)
Query: 321 KATSFFSEKHRLGTGAYGTV-----------YAGKLHNDDWVAIKRFRYRDTDSIDQVMN 369
K + + K LG GA+ V +A K+ N K+ RD +++
Sbjct: 2 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIIN-----TKKLSARDFQKLER--- 53
Query: 370 EIKLLSSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTLCQHL-QRERGSGLPWXXXXXXX 428
E ++ + HPN++RL EE LV++ + G L + + RE S
Sbjct: 54 EARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSE---ADASHCI 110
Query: 429 XXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRS---KVADFGLS-RLGMTESSHIST 484
Y HS I HR++K N+LL + K+ADFGL+ + +E+ H
Sbjct: 111 QQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH--- 164
Query: 485 APQGTPGYLDPQYHQYFHLSDKSDVYSFGVVL 516
GTPGYL P+ + S D+++ GV+L
Sbjct: 165 GFAGTPGYLSPEVLKKDPYSKPVDIWACGVIL 196
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 74/157 (47%), Gaps = 10/157 (6%)
Query: 369 NEIKLLSSVSHPNLLRLLGCCIEEGEP--ILVYEFMPNGTLCQHLQRERGSGLPWXXXXX 426
EI++L ++ H ++++ GCC ++GE LV E++P G+L +L R GL
Sbjct: 59 REIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPR-HCVGL--AQLLL 115
Query: 427 XXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAP 486
YLH+ HR + + N+LLD + K+ DFGL++ +
Sbjct: 116 FAQQICEGMAYLHAQH---YIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVRE 172
Query: 487 QGTPG--YLDPQYHQYFHLSDKSDVYSFGVVLIEIIT 521
G + P+ + SDV+SFGV L E++T
Sbjct: 173 DGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLT 209
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 85/196 (43%), Gaps = 11/196 (5%)
Query: 332 LGTGAYGTV-YAGKLHNDDWVAIKRFRY-RDTDSIDQVMNEIKLLSSVSHPNLLRLLGCC 389
LG GAYG V A ++ VA+K R D + + EI + ++H N+++ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHR 73
Query: 390 IEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHR 449
E L E+ G L + E G+P YLH I HR
Sbjct: 74 REGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDAQRFFHQLMAGVVYLHGIG---ITHR 128
Query: 450 DIKSSNILLDYNYRSKVADFGLSRL-GMTESSHISTAPQGTPGYLDPQY--HQYFHLSDK 506
DIK N+LLD K++DFGL+ + + GT Y+ P+ + FH ++
Sbjct: 129 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH-AEP 187
Query: 507 SDVYSFGVVLIEIITA 522
DV+S G+VL ++
Sbjct: 188 VDVWSCGIVLTAMLAG 203
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 85/196 (43%), Gaps = 11/196 (5%)
Query: 332 LGTGAYGTV-YAGKLHNDDWVAIKRFRY-RDTDSIDQVMNEIKLLSSVSHPNLLRLLGCC 389
LG GAYG V A ++ VA+K R D + + EI + ++H N+++ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 390 IEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHR 449
E L E+ G L + E G+P YLH I HR
Sbjct: 74 REGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDAQRFFHQLMAGVVYLHGIG---ITHR 128
Query: 450 DIKSSNILLDYNYRSKVADFGLSRL-GMTESSHISTAPQGTPGYLDPQY--HQYFHLSDK 506
DIK N+LLD K++DFGL+ + + GT Y+ P+ + FH ++
Sbjct: 129 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFH-AEP 187
Query: 507 SDVYSFGVVLIEIITA 522
DV+S G+VL ++
Sbjct: 188 VDVWSCGIVLTAMLAG 203
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 92/212 (43%), Gaps = 33/212 (15%)
Query: 321 KATSFFSEKHRLGTGAYGTV-----------YAGKLHNDDWVAIKRFRYRDTDSIDQVMN 369
K + + K LG GA+ V +A K+ N K+ RD +++
Sbjct: 3 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIIN-----TKKLSARDFQKLER--- 54
Query: 370 EIKLLSSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTLCQHL-QRERGSGLPWXXXXXXX 428
E ++ + HPN++RL EE LV++ + G L + + RE S
Sbjct: 55 EARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSE---ADASHCI 111
Query: 429 XXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRS---KVADFGLS-RLGMTESSHIST 484
Y HS I HR++K N+LL + K+ADFGL+ + +E+ H
Sbjct: 112 QQILESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH--- 165
Query: 485 APQGTPGYLDPQYHQYFHLSDKSDVYSFGVVL 516
GTPGYL P+ + S D+++ GV+L
Sbjct: 166 GFAGTPGYLSPEVLKKDPYSKPVDIWACGVIL 197
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 91/199 (45%), Gaps = 16/199 (8%)
Query: 332 LGTGAYGTVY-AGKLHNDD---WVAIKRFRYRDTDSIDQVMNEIK--LLSSVSHPNLLRL 385
LG G++G V+ K+ D A+K + D+V +++ +L+ V+HP +++L
Sbjct: 36 LGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVNHPFVVKL 95
Query: 386 LGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPP 445
EG+ L+ +F+ G L L +E +LHS
Sbjct: 96 HYAFQTEGKLYLILDFLRGGDLFTRLSKE--VMFTEEDVKFYLAELALGLDHLHSL---G 150
Query: 446 IYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQ--GTPGYLDPQYHQYFHL 503
I +RD+K NILLD K+ DFGLS+ + H A GT Y+ P+
Sbjct: 151 IIYRDLKPENILLDEEGHIKLTDFGLSKEAI---DHEKKAYSFCGTVEYMAPEVVNRQGH 207
Query: 504 SDKSDVYSFGVVLIEIITA 522
S +D +S+GV++ E++T
Sbjct: 208 SHSADWWSYGVLMFEMLTG 226
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 82/187 (43%), Gaps = 15/187 (8%)
Query: 363 SIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWX 422
S+ ++ E++++ ++HPN+++L E L+ E+ G + +L +
Sbjct: 57 SLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAH--GRMKEK 114
Query: 423 XXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHI 482
Y H I HRD+K+ N+LLD + K+ADFG S T +
Sbjct: 115 EARSKFRQIVSAVQYCHQKR---IVHRDLKAENLLLDADMNIKIADFGFSN-EFTVGGKL 170
Query: 483 STAPQGTPGYLDPQYHQ-YFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALA 541
A G P Y P+ Q + + DV+S GV+L +++ S P NL L
Sbjct: 171 D-AFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG------SLPFDGQNLKELR 223
Query: 542 IDRIGRG 548
+R+ RG
Sbjct: 224 -ERVLRG 229
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 84/200 (42%), Gaps = 11/200 (5%)
Query: 332 LGTGAYGTVY------AGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRL 385
+G GA+ V G+ V + +F S + + E + + HP+++ L
Sbjct: 32 IGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVEL 91
Query: 386 LGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPP 445
L +G +V+EFM LC + + +G + L +
Sbjct: 92 LETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEA-LRYCHDNN 150
Query: 446 IYHRDIKSSNILLDYNYRS---KVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFH 502
I HRD+K N+LL S K+ DFG++ + + ES ++ GTP ++ P+ +
Sbjct: 151 IIHRDVKPENVLLASKENSAPVKLGDFGVA-IQLGESGLVAGGRVGTPHFMAPEVVKREP 209
Query: 503 LSDKSDVYSFGVVLIEIITA 522
DV+ GV+L +++
Sbjct: 210 YGKPVDVWGCGVILFILLSG 229
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 89/217 (41%), Gaps = 38/217 (17%)
Query: 320 EKATSFFSEKHRLGTGAYGTV-----------YAGKLHNDDWVAIKRFRYRDTD---SID 365
E ++ LG+G + V YA K IK+ R + + S +
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKF-------IKKRRTKSSRRGVSRE 59
Query: 366 QVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXX 425
+ E+ +L + HPN++ L + + IL+ E + G L L + L
Sbjct: 60 DIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEAT 117
Query: 426 XXXXXXXXXXXYLHSAMNPPIYHRDIKSSNI-LLDYNY---RSKVADFGLSR---LGMTE 478
YLHS I H D+K NI LLD N R K+ DFGL+ G E
Sbjct: 118 EFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG-NE 173
Query: 479 SSHISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVV 515
+I GTP ++ P+ Y L ++D++S GV+
Sbjct: 174 FKNIF----GTPAFVAPEIVNYEPLGLEADMWSIGVI 206
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 86/197 (43%), Gaps = 23/197 (11%)
Query: 331 RLGTGAYGTVY--AGKLHNDDWVA--IKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLL 386
+LG+GAYG V KL + IK+ T + +++E+ +L + HPN+++L
Sbjct: 11 KLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLY 70
Query: 387 GCCIEEGEPILVYEFMPNGTLCQH-LQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPP 445
++ LV E G L + R++ S + YLH
Sbjct: 71 EFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVD---AAVIMKQVLSGTTYLH---KHN 124
Query: 446 IYHRDIKSSNILLDYNYRS---KVADFGLS---RLGMTESSHISTAPQGTPGYLDPQYHQ 499
I HRD+K N+LL+ R K+ DFGLS +G + TA P L +Y
Sbjct: 125 IVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVLRKKY-- 182
Query: 500 YFHLSDKSDVYSFGVVL 516
+K DV+S GV+L
Sbjct: 183 ----DEKCDVWSCGVIL 195
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 85/196 (43%), Gaps = 11/196 (5%)
Query: 332 LGTGAYGTV-YAGKLHNDDWVAIKRFRY-RDTDSIDQVMNEIKLLSSVSHPNLLRLLGCC 389
LG GAYG V A ++ VA+K R D + + EI + ++H N+++ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 390 IEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHR 449
E L E+ G L + E G+P YLH I HR
Sbjct: 74 REGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDAQRFFHQLMAGVVYLHGIG---ITHR 128
Query: 450 DIKSSNILLDYNYRSKVADFGLSRL-GMTESSHISTAPQGTPGYLDPQY--HQYFHLSDK 506
DIK N+LLD K++DFGL+ + + GT Y+ P+ + FH ++
Sbjct: 129 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFH-AEP 187
Query: 507 SDVYSFGVVLIEIITA 522
DV+S G+VL ++
Sbjct: 188 VDVWSCGIVLTAMLAG 203
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 88/195 (45%), Gaps = 25/195 (12%)
Query: 360 DTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTLCQHL-----QRE 414
++ S+ ++ E+++ ++HPN+++L E LV E+ G + +L +E
Sbjct: 53 NSSSLQKLFREVRIXKVLNHPNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKE 112
Query: 415 RGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRL 474
+ + + Y H I HRD+K+ N+LLD + K+ADFG S
Sbjct: 113 KEARAKFRQIVSAVQ-------YCHQKF---IVHRDLKAENLLLDADXNIKIADFGFSN- 161
Query: 475 GMTESSHISTAPQGTPGYLDPQYHQ-YFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHS 533
T + + A G P Y P+ Q + + DV+S GV+L +++ S P
Sbjct: 162 EFTFGNKLD-AFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG------SLPFD 214
Query: 534 EVNLAALAIDRIGRG 548
NL L +R+ RG
Sbjct: 215 GQNLKELR-ERVLRG 228
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 89/207 (42%), Gaps = 21/207 (10%)
Query: 332 LGTGAYGTVYAGK---LHNDD---WVAIKRFR--YRDTDSIDQVMNEIKLLSSVSHPNLL 383
LG GA+G VY G+ + ND VA+K Y + D +D +M E ++S +H N++
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLM-EALIISKFNHQNIV 111
Query: 384 RLLGCCIEEGEPILVYEFMPNGTLCQHLQRERG-----SGLPWXXXXXXXXXXXXXXXYL 438
R +G ++ ++ E M G L L+ R S L YL
Sbjct: 112 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 171
Query: 439 HSAMNPPIYHRDIKSSNILLD---YNYRSKVADFGLSRLGMTESSHISTAPQGTP-GYLD 494
HRDI + N LL +K+ DFG++R S + P ++
Sbjct: 172 EENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 228
Query: 495 PQYHQYFHLSDKSDVYSFGVVLIEIIT 521
P+ + K+D +SFGV+L EI +
Sbjct: 229 PEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 90/212 (42%), Gaps = 19/212 (8%)
Query: 326 FSEKHRLGTGAYGTVYAGKLHND--DWVAIKRFRYR-DTDSIDQVMNEIKLLSSVSHPNL 382
+ K RLGTG +G V +H D + VAIK+ R + ++ EI+++ ++HPN+
Sbjct: 16 WEMKERLGTGGFGYVLRW-IHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNV 74
Query: 383 LRL------LGCCIEEGEPILVYEFMPNGTLCQHL-QRERGSGLPWXXXXXXXXXXXXXX 435
+ L P+L E+ G L ++L Q E GL
Sbjct: 75 VSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSAL 134
Query: 436 XYLHSAMNPPIYHRDIKSSNILLD---YNYRSKVADFGLSRLGMTESSHISTAPQGTPGY 492
YLH I HRD+K NI+L K+ D G ++ + + T GT Y
Sbjct: 135 RYLHENR---IIHRDLKPENIVLQPGPQRLIHKIIDLGYAK--ELDQGELCTEFVGTLQY 189
Query: 493 LDPQYHQYFHLSDKSDVYSFGVVLIEIITALK 524
L P+ + + D +SFG + E IT +
Sbjct: 190 LAPELLEQKKYTVTVDYWSFGTLAFECITGFR 221
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 90/212 (42%), Gaps = 19/212 (8%)
Query: 326 FSEKHRLGTGAYGTVYAGKLHND--DWVAIKRFRYR-DTDSIDQVMNEIKLLSSVSHPNL 382
+ K RLGTG +G V +H D + VAIK+ R + ++ EI+++ ++HPN+
Sbjct: 17 WEMKERLGTGGFGYVLRW-IHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNV 75
Query: 383 LRL------LGCCIEEGEPILVYEFMPNGTLCQHL-QRERGSGLPWXXXXXXXXXXXXXX 435
+ L P+L E+ G L ++L Q E GL
Sbjct: 76 VSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSAL 135
Query: 436 XYLHSAMNPPIYHRDIKSSNILLD---YNYRSKVADFGLSRLGMTESSHISTAPQGTPGY 492
YLH I HRD+K NI+L K+ D G ++ + + T GT Y
Sbjct: 136 RYLHENR---IIHRDLKPENIVLQPGPQRLIHKIIDLGYAK--ELDQGELCTEFVGTLQY 190
Query: 493 LDPQYHQYFHLSDKSDVYSFGVVLIEIITALK 524
L P+ + + D +SFG + E IT +
Sbjct: 191 LAPELLEQKKYTVTVDYWSFGTLAFECITGFR 222
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 85/196 (43%), Gaps = 11/196 (5%)
Query: 332 LGTGAYGTV-YAGKLHNDDWVAIKRFRY-RDTDSIDQVMNEIKLLSSVSHPNLLRLLGCC 389
LG GAYG V A ++ VA+K R D + + EI + ++H N+++ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 390 IEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHR 449
E L E+ G L + E G+P YLH I HR
Sbjct: 74 REGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDAQRFFHQLMAGVVYLHGIG---ITHR 128
Query: 450 DIKSSNILLDYNYRSKVADFGLSRL-GMTESSHISTAPQGTPGYLDPQY--HQYFHLSDK 506
DIK N+LLD K++DFGL+ + + GT Y+ P+ + FH ++
Sbjct: 129 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH-AEP 187
Query: 507 SDVYSFGVVLIEIITA 522
DV+S G+VL ++
Sbjct: 188 VDVWSCGIVLTAMLAG 203
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 85/196 (43%), Gaps = 11/196 (5%)
Query: 332 LGTGAYGTV-YAGKLHNDDWVAIKRFRY-RDTDSIDQVMNEIKLLSSVSHPNLLRLLGCC 389
LG GAYG V A ++ VA+K R D + + EI + ++H N+++ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 390 IEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHR 449
E L E+ G L + E G+P YLH I HR
Sbjct: 74 REGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDAQRFFHQLMAGVVYLHGIG---ITHR 128
Query: 450 DIKSSNILLDYNYRSKVADFGLSRL-GMTESSHISTAPQGTPGYLDPQY--HQYFHLSDK 506
DIK N+LLD K++DFGL+ + + GT Y+ P+ + FH ++
Sbjct: 129 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFH-AEP 187
Query: 507 SDVYSFGVVLIEIITA 522
DV+S G+VL ++
Sbjct: 188 VDVWSCGIVLTAMLAG 203
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 84/194 (43%), Gaps = 12/194 (6%)
Query: 332 LGTGAYGTVYAGKLHNDDWVAIKRFRYR---DTDSID-QVMNEIKLLSSVSHPNLLRLLG 387
LG G +G VY + ++ + ++ + + ++ Q+ EI++ + + HPN+LRL
Sbjct: 31 LGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHPNILRLYN 90
Query: 388 CCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIY 447
+ L+ E+ P G L + LQ + Y H +
Sbjct: 91 YFYDRRRIYLILEYAPRGELYKELQ--KSCTFDEQRTATIMEELADALMYCHGKK---VI 145
Query: 448 HRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLSDKS 507
HRDIK N+LL K+ADFG S + S GT YL P+ + ++K
Sbjct: 146 HRDIKPENLLLGLKGELKIADFGWS---VHAPSLRRKTMCGTLDYLPPEMIEGRMHNEKV 202
Query: 508 DVYSFGVVLIEIIT 521
D++ GV+ E++
Sbjct: 203 DLWCIGVLCYELLV 216
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 85/196 (43%), Gaps = 11/196 (5%)
Query: 332 LGTGAYGTV-YAGKLHNDDWVAIKRFRY-RDTDSIDQVMNEIKLLSSVSHPNLLRLLGCC 389
LG GAYG V A ++ VA+K R D + + EI + ++H N+++ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 390 IEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHR 449
E L E+ G L + E G+P YLH I HR
Sbjct: 75 REGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDAQRFFHQLMAGVVYLHGIG---ITHR 129
Query: 450 DIKSSNILLDYNYRSKVADFGLSRL-GMTESSHISTAPQGTPGYLDPQY--HQYFHLSDK 506
DIK N+LLD K++DFGL+ + + GT Y+ P+ + FH ++
Sbjct: 130 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH-AEP 188
Query: 507 SDVYSFGVVLIEIITA 522
DV+S G+VL ++
Sbjct: 189 VDVWSCGIVLTAMLAG 204
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 103/233 (44%), Gaps = 43/233 (18%)
Query: 321 KATSFFSEKHRLGTGAYGTVYAGKLHNDD-WVAIKRFRYRDTDSIDQVMNEIKLLSSVSH 379
+ S F E LG GA+G V + D + AIK+ R+ + + + +++E+ LL+S++H
Sbjct: 3 RYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTE-EKLSTILSEVMLLASLNH 61
Query: 380 PNLLRLLGCCIEEG---EPI----------LVYEFMPNGTL-----CQHLQRERGSGLPW 421
++R +E +P+ + E+ N TL ++L ++R W
Sbjct: 62 QYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEY--W 119
Query: 422 XXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSR-------- 473
Y+HS I HRD+K NI +D + K+ DFGL++
Sbjct: 120 RLFRQILEALS----YIHSQ---GIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDI 172
Query: 474 -----LGMTESSHISTAPQGTPGYLDPQYHQ-YFHLSDKSDVYSFGVVLIEII 520
+ SS T+ GT Y+ + H ++K D+YS G++ E+I
Sbjct: 173 LKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 92/200 (46%), Gaps = 23/200 (11%)
Query: 332 LGTGAYGTV---YAGKLHNDDWVAIKRFR--YRDTDSIDQVMNEIKLLSSVSHPNLLRLL 386
+G+GA G V Y L D VAIK+ +++ + E+ L+ V+H N++ LL
Sbjct: 32 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLL 89
Query: 387 GC-----CIEEGEPI-LVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHS 440
+EE + + LV E M + LCQ +Q E L +LHS
Sbjct: 90 NVFTPQKTLEEFQDVYLVMELM-DANLCQVIQME----LDHERMSYLLYQMLCGIKHLHS 144
Query: 441 AMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQY 500
A I HRD+K SNI++ + K+ DFGL+R T S + T T Y P+
Sbjct: 145 A---GIIHRDLKPSNIVVKSDXTLKILDFGLARTAGT--SFMMTPYVVTRYYRAPEVILG 199
Query: 501 FHLSDKSDVYSFGVVLIEII 520
+ D++S G ++ E++
Sbjct: 200 MGYKENVDIWSVGCIMGEMV 219
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 98/212 (46%), Gaps = 25/212 (11%)
Query: 319 IEKATSFFSEKHR----LGTGAYGTVY--AGKLHNDD---WVAIKRFRYRDTDSIDQVMN 369
++ +T+ FS++++ LG G++G V K+ + V KR + TD + ++
Sbjct: 17 VQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDK-ESLLR 75
Query: 370 EIKLLSSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTLCQHL-QRERGSGLPWXXXXXXX 428
E++LL + HPN+ +L ++G LV E G L + R+R S +
Sbjct: 76 EVQLLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVD---AARII 132
Query: 429 XXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRS---KVADFGLSRLGMTESSHISTA 485
Y H I HRD+K N+LL+ + ++ DFGLS E+S
Sbjct: 133 RQVLSGITYXH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLST--HFEASKKXKD 187
Query: 486 PQGTPGYLDPQ-YHQYFHLSDKSDVYSFGVVL 516
GT Y+ P+ H + +K DV+S GV+L
Sbjct: 188 KIGTAYYIAPEVLHGTY--DEKCDVWSTGVIL 217
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 86/205 (41%), Gaps = 27/205 (13%)
Query: 326 FSEKHRLGTGAYGTV-----------YAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLL 374
F LGTG++G V YA K+ + V I+ +NE ++L
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVV-------KLKQIEHTLNEKRIL 95
Query: 375 SSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXX 434
+V+ P L++L + +V E++ G + HL+R P
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP--HARFYAAQIVLT 153
Query: 435 XXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLD 494
YLHS + +RD+K N+L+D +V DFG ++ + ++ GTP YL
Sbjct: 154 FEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLA----GTPEYLA 206
Query: 495 PQYHQYFHLSDKSDVYSFGVVLIEI 519
P+ + D ++ GV++ E+
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 86/196 (43%), Gaps = 11/196 (5%)
Query: 332 LGTGAYGTV-YAGKLHNDDWVAIKRFRY-RDTDSIDQVMNEIKLLSSVSHPNLLRLLGCC 389
LG GAYG V A ++ VA+K R D + + EI + + ++H N+++ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVVKFYGHR 74
Query: 390 IEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHR 449
E L E+ G L + E G+P YLH I HR
Sbjct: 75 REGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDAQRFFHQLMAGVVYLHGI---GITHR 129
Query: 450 DIKSSNILLDYNYRSKVADFGLSRL-GMTESSHISTAPQGTPGYLDPQY--HQYFHLSDK 506
DIK N+LLD K++DFGL+ + + GT Y+ P+ + FH ++
Sbjct: 130 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH-AEP 188
Query: 507 SDVYSFGVVLIEIITA 522
DV+S G+VL ++
Sbjct: 189 VDVWSCGIVLTAMLAG 204
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 67/145 (46%), Gaps = 7/145 (4%)
Query: 331 RLGTGAYGTVYAGKLH-NDDWVAIKRFRYRDTDSID-QVMNEIKLLSSVSHPNLLRLLGC 388
+LG G Y TVY GK D+ VA+K R + + E+ LL + H N++ L
Sbjct: 9 KLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDI 68
Query: 389 CIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYH 448
E LV+E++ + L Q+L + G+ + Y H + H
Sbjct: 69 IHTEKSLTLVFEYL-DKDLKQYLD-DCGNIINMHNVKLFLFQLLRGLAYCHRQ---KVLH 123
Query: 449 RDIKSSNILLDYNYRSKVADFGLSR 473
RD+K N+L++ K+ADFGL+R
Sbjct: 124 RDLKPQNLLINERGELKLADFGLAR 148
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 85/196 (43%), Gaps = 11/196 (5%)
Query: 332 LGTGAYGTV-YAGKLHNDDWVAIKRFRY-RDTDSIDQVMNEIKLLSSVSHPNLLRLLGCC 389
LG GAYG V A ++ VA+K R D + + EI + ++H N+++ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 390 IEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHR 449
E L E+ G L + E G+P YLH I HR
Sbjct: 75 REGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDAQRFFHQLMAGVVYLHGIG---ITHR 129
Query: 450 DIKSSNILLDYNYRSKVADFGLSRL-GMTESSHISTAPQGTPGYLDPQY--HQYFHLSDK 506
DIK N+LLD K++DFGL+ + + GT Y+ P+ + FH ++
Sbjct: 130 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH-AEP 188
Query: 507 SDVYSFGVVLIEIITA 522
DV+S G+VL ++
Sbjct: 189 VDVWSCGIVLTAMLAG 204
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 85/196 (43%), Gaps = 11/196 (5%)
Query: 332 LGTGAYGTV-YAGKLHNDDWVAIKRFRY-RDTDSIDQVMNEIKLLSSVSHPNLLRLLGCC 389
LG GAYG V A ++ VA+K R D + + EI + ++H N+++ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 390 IEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHR 449
E L E+ G L + E G+P YLH I HR
Sbjct: 75 REGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDAQRFFHQLMAGVVYLHGIG---ITHR 129
Query: 450 DIKSSNILLDYNYRSKVADFGLSRL-GMTESSHISTAPQGTPGYLDPQY--HQYFHLSDK 506
DIK N+LLD K++DFGL+ + + GT Y+ P+ + FH ++
Sbjct: 130 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH-AEP 188
Query: 507 SDVYSFGVVLIEIITA 522
DV+S G+VL ++
Sbjct: 189 VDVWSCGIVLTAMLAG 204
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 85/196 (43%), Gaps = 11/196 (5%)
Query: 332 LGTGAYGTV-YAGKLHNDDWVAIKRFRY-RDTDSIDQVMNEIKLLSSVSHPNLLRLLGCC 389
LG GAYG V A ++ VA+K R D + + EI + ++H N+++ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 390 IEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHR 449
E L E+ G L + E G+P YLH I HR
Sbjct: 75 REGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDAQRFFHQLMAGVVYLHGIG---ITHR 129
Query: 450 DIKSSNILLDYNYRSKVADFGLSRL-GMTESSHISTAPQGTPGYLDPQY--HQYFHLSDK 506
DIK N+LLD K++DFGL+ + + GT Y+ P+ + FH ++
Sbjct: 130 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH-AEP 188
Query: 507 SDVYSFGVVLIEIITA 522
DV+S G+VL ++
Sbjct: 189 VDVWSCGIVLTAMLAG 204
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 85/196 (43%), Gaps = 11/196 (5%)
Query: 332 LGTGAYGTV-YAGKLHNDDWVAIKRFRY-RDTDSIDQVMNEIKLLSSVSHPNLLRLLGCC 389
LG GAYG V A ++ VA+K R D + + EI + ++H N+++ G
Sbjct: 13 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 72
Query: 390 IEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHR 449
E L E+ G L + E G+P YLH I HR
Sbjct: 73 REGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDAQRFFHQLMAGVVYLHGIG---ITHR 127
Query: 450 DIKSSNILLDYNYRSKVADFGLSRL-GMTESSHISTAPQGTPGYLDPQY--HQYFHLSDK 506
DIK N+LLD K++DFGL+ + + GT Y+ P+ + FH ++
Sbjct: 128 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH-AEP 186
Query: 507 SDVYSFGVVLIEIITA 522
DV+S G+VL ++
Sbjct: 187 VDVWSCGIVLTAMLAG 202
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 85/196 (43%), Gaps = 11/196 (5%)
Query: 332 LGTGAYGTV-YAGKLHNDDWVAIKRFRY-RDTDSIDQVMNEIKLLSSVSHPNLLRLLGCC 389
LG GAYG V A ++ VA+K R D + + EI + ++H N+++ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 390 IEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHR 449
E L E+ G L + E G+P YLH I HR
Sbjct: 74 REGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDAQRFFHQLMAGVVYLHGIG---ITHR 128
Query: 450 DIKSSNILLDYNYRSKVADFGLSRL-GMTESSHISTAPQGTPGYLDPQY--HQYFHLSDK 506
DIK N+LLD K++DFGL+ + + GT Y+ P+ + FH ++
Sbjct: 129 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH-AEP 187
Query: 507 SDVYSFGVVLIEIITA 522
DV+S G+VL ++
Sbjct: 188 VDVWSCGIVLTAMLAG 203
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 86/197 (43%), Gaps = 23/197 (11%)
Query: 331 RLGTGAYGTVY--AGKLHNDDWVA--IKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLL 386
+LG+GAYG V KL + IK+ T + +++E+ +L + HPN+++L
Sbjct: 28 KLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLY 87
Query: 387 GCCIEEGEPILVYEFMPNGTLCQH-LQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPP 445
++ LV E G L + R++ S + YLH
Sbjct: 88 EFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVD---AAVIMKQVLSGTTYLHKH---N 141
Query: 446 IYHRDIKSSNILLDYNYRS---KVADFGLS---RLGMTESSHISTAPQGTPGYLDPQYHQ 499
I HRD+K N+LL+ R K+ DFGLS +G + TA P L +Y
Sbjct: 142 IVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVLRKKY-- 199
Query: 500 YFHLSDKSDVYSFGVVL 516
+K DV+S GV+L
Sbjct: 200 ----DEKCDVWSCGVIL 212
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 92/200 (46%), Gaps = 23/200 (11%)
Query: 332 LGTGAYGTV---YAGKLHNDDWVAIKRFR--YRDTDSIDQVMNEIKLLSSVSHPNLLRLL 386
+G+GA G V Y L D VAIK+ +++ + E+ L+ V+H N++ LL
Sbjct: 70 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 127
Query: 387 GC-----CIEEGEPI-LVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHS 440
+EE + + LV E M + LCQ +Q E L +LHS
Sbjct: 128 NVFTPQKTLEEFQDVYLVMELM-DANLCQVIQME----LDHERMSYLLYQMLCGIKHLHS 182
Query: 441 AMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQY 500
A I HRD+K SNI++ + K+ DFGL+R T S + T T Y P+
Sbjct: 183 A---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMMTPYVVTRYYRAPEVILG 237
Query: 501 FHLSDKSDVYSFGVVLIEII 520
+ D++S G ++ E++
Sbjct: 238 MGYKENVDIWSVGCIMGEMV 257
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 90/217 (41%), Gaps = 28/217 (12%)
Query: 326 FSEKHRLGTGAYGTVYAGKLHNDDW----VAIKRFRYRDTDS--IDQVMNEIKLLSSVSH 379
F+ LG G +G+V +L +D VA+K + S I++ + E + H
Sbjct: 25 FTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDH 84
Query: 380 PNLLRLLGCCIEEGE------PILVYEFMPNGTLCQHLQRERGS----GLPWXXXXXXXX 429
P++ +L+G + P+++ FM +G L L R LP
Sbjct: 85 PHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMV 144
Query: 430 XXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGT 489
YL S HRD+ + N +L + VADFGLSR + + QG
Sbjct: 145 DIACGMEYLSSR---NFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYY----RQGC 197
Query: 490 PGYLDPQYHQYFHLSDK-----SDVYSFGVVLIEIIT 521
L ++ L+D SDV++FGV + EI+T
Sbjct: 198 ASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMT 234
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 90/199 (45%), Gaps = 21/199 (10%)
Query: 332 LGTGAYGTV---YAGKLHNDDWVAIKRFR--YRDTDSIDQVMNEIKLLSSVSHPNLLRLL 386
+G+GA G V Y L + VAIK+ +++ + E+ L+ V+H N++ LL
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 387 GC-----CIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSA 441
+EE + + + + + LCQ +Q E L +LHSA
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDANLCQVIQME----LDHERMSYLLYQMLCGIKHLHSA 145
Query: 442 MNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYF 501
I HRD+K SNI++ + K+ DFGL+R T S + T T Y P+
Sbjct: 146 ---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMMTPEVVTRYYRAPEVILGM 200
Query: 502 HLSDKSDVYSFGVVLIEII 520
+ D++S G ++ E+I
Sbjct: 201 GYKENVDIWSVGCIMGEMI 219
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 86/203 (42%), Gaps = 20/203 (9%)
Query: 324 SFFSEKHRLGTGAYGTV------YAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSV 377
S + LG GA+ V AG+ + + K+ RD +++ E ++ +
Sbjct: 22 SMYQLFEELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLER---EARICRLL 78
Query: 378 SHPNLLRLLGCCIEEGEPILVYEFMPNGTLCQHL-QRERGSGLPWXXXXXXXXXXXXXXX 436
HPN++RL EEG L+++ + G L + + RE +
Sbjct: 79 KHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREY-----YSEADASHCIQQILEA 133
Query: 437 YLHSAMNPPIYHRDIKSSNILLDYNYRS---KVADFGLSRLGMTESSHISTAPQGTPGYL 493
LH + HRD+K N+LL + K+ADFGL+ + + GTPGYL
Sbjct: 134 VLH-CHQMGVVHRDLKPENLLLASKLKGAAVKLADFGLA-IEVEGEQQAWFGFAGTPGYL 191
Query: 494 DPQYHQYFHLSDKSDVYSFGVVL 516
P+ + D+++ GV+L
Sbjct: 192 SPEVLRKDPYGKPVDLWACGVIL 214
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 85/196 (43%), Gaps = 11/196 (5%)
Query: 332 LGTGAYGTV-YAGKLHNDDWVAIKRFRY-RDTDSIDQVMNEIKLLSSVSHPNLLRLLGCC 389
LG GAYG V A ++ VA+K R D + + EI + ++H N+++ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 390 IEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHR 449
E L E+ G L + E G+P YLH I HR
Sbjct: 74 REGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDAQRFFHQLMAGVVYLHGI---GITHR 128
Query: 450 DIKSSNILLDYNYRSKVADFGLSRL-GMTESSHISTAPQGTPGYLDPQY--HQYFHLSDK 506
DIK N+LLD K++DFGL+ + + GT Y+ P+ + FH ++
Sbjct: 129 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH-AEP 187
Query: 507 SDVYSFGVVLIEIITA 522
DV+S G+VL ++
Sbjct: 188 VDVWSCGIVLTAMLAG 203
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 85/196 (43%), Gaps = 11/196 (5%)
Query: 332 LGTGAYGTV-YAGKLHNDDWVAIKRFRY-RDTDSIDQVMNEIKLLSSVSHPNLLRLLGCC 389
LG GAYG V A ++ VA+K R D + + EI + ++H N+++ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 390 IEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHR 449
E L E+ G L + E G+P YLH I HR
Sbjct: 75 REGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDAQRFFHQLMAGVVYLHGIG---ITHR 129
Query: 450 DIKSSNILLDYNYRSKVADFGLSRL-GMTESSHISTAPQGTPGYLDPQY--HQYFHLSDK 506
DIK N+LLD K++DFGL+ + + GT Y+ P+ + FH ++
Sbjct: 130 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH-AEP 188
Query: 507 SDVYSFGVVLIEIITA 522
DV+S G+VL ++
Sbjct: 189 VDVWSCGIVLTAMLAG 204
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 89/217 (41%), Gaps = 38/217 (17%)
Query: 320 EKATSFFSEKHRLGTGAYGTV-----------YAGKLHNDDWVAIKRFRYRDTD---SID 365
E ++ LG+G + V YA K IK+ R + + S +
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKF-------IKKRRTKSSRRGVSRE 59
Query: 366 QVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXX 425
+ E+ +L + HPN++ L + + IL+ E + G L L + L
Sbjct: 60 DIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEAT 117
Query: 426 XXXXXXXXXXXYLHSAMNPPIYHRDIKSSNI-LLDYNY---RSKVADFGLSR---LGMTE 478
YLHS I H D+K NI LLD N R K+ DFGL+ G E
Sbjct: 118 EFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG-NE 173
Query: 479 SSHISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVV 515
+I GTP ++ P+ Y L ++D++S GV+
Sbjct: 174 FKNIF----GTPEFVAPEIVNYEPLGLEADMWSIGVI 206
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 85/197 (43%), Gaps = 10/197 (5%)
Query: 332 LGTGAYGTVYAGKLHNDDWV-AIKRFRYRDTDSIDQ--VMNEIKLLSSVSHPNLLRLLGC 388
+G+G G V+ + V A+K+ R ++ +M+ +L S P +++ G
Sbjct: 33 MGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGT 92
Query: 389 CIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYH 448
I + + E M GT + L++ +P YL + H
Sbjct: 93 FITNTDVFIAMELM--GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHG--VIH 148
Query: 449 RDIKSSNILLDYNYRSKVADFGLS-RLGMTESSHIST--APQGTPGYLDPQYHQYFHLSD 505
RD+K SNILLD + K+ DFG+S RL ++ S A P +DP
Sbjct: 149 RDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRSAGCAAYMAPERIDPPDPTKPDYDI 208
Query: 506 KSDVYSFGVVLIEIITA 522
++DV+S G+ L+E+ T
Sbjct: 209 RADVWSLGISLVELATG 225
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 85/196 (43%), Gaps = 11/196 (5%)
Query: 332 LGTGAYGTV-YAGKLHNDDWVAIKRFRY-RDTDSIDQVMNEIKLLSSVSHPNLLRLLGCC 389
LG GAYG V A ++ VA+K R D + + EI + ++H N+++ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 390 IEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHR 449
E L E+ G L + E G+P YLH I HR
Sbjct: 74 REGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDAQRFFHQLMAGVVYLHGI---GITHR 128
Query: 450 DIKSSNILLDYNYRSKVADFGLSRL-GMTESSHISTAPQGTPGYLDPQY--HQYFHLSDK 506
DIK N+LLD K++DFGL+ + + GT Y+ P+ + FH ++
Sbjct: 129 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH-AEP 187
Query: 507 SDVYSFGVVLIEIITA 522
DV+S G+VL ++
Sbjct: 188 VDVWSCGIVLTAMLAG 203
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 85/196 (43%), Gaps = 11/196 (5%)
Query: 332 LGTGAYGTV-YAGKLHNDDWVAIKRFRY-RDTDSIDQVMNEIKLLSSVSHPNLLRLLGCC 389
LG GAYG V A ++ VA+K R D + + EI + ++H N+++ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 390 IEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHR 449
E L E+ G L + E G+P YLH I HR
Sbjct: 75 REGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDAQRFFHQLMAGVVYLHGI---GITHR 129
Query: 450 DIKSSNILLDYNYRSKVADFGLSRL-GMTESSHISTAPQGTPGYLDPQY--HQYFHLSDK 506
DIK N+LLD K++DFGL+ + + GT Y+ P+ + FH ++
Sbjct: 130 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH-AEP 188
Query: 507 SDVYSFGVVLIEIITA 522
DV+S G+VL ++
Sbjct: 189 VDVWSCGIVLTAMLAG 204
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 89/217 (41%), Gaps = 38/217 (17%)
Query: 320 EKATSFFSEKHRLGTGAYGTV-----------YAGKLHNDDWVAIKRFRYRDTD---SID 365
E ++ LG+G + V YA K IK+ R + + S +
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKF-------IKKRRTKSSRRGVSRE 59
Query: 366 QVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXX 425
+ E+ +L + HPN++ L + + IL+ E + G L L + L
Sbjct: 60 DIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEAT 117
Query: 426 XXXXXXXXXXXYLHSAMNPPIYHRDIKSSNI-LLDYNY---RSKVADFGLSR---LGMTE 478
YLHS I H D+K NI LLD N R K+ DFGL+ G E
Sbjct: 118 EFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG-NE 173
Query: 479 SSHISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVV 515
+I GTP ++ P+ Y L ++D++S GV+
Sbjct: 174 FKNIF----GTPEFVAPEIVNYEPLGLEADMWSIGVI 206
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 89/217 (41%), Gaps = 38/217 (17%)
Query: 320 EKATSFFSEKHRLGTGAYGTV-----------YAGKLHNDDWVAIKRFRYRDTD---SID 365
E ++ LG+G + V YA K IK+ R + + S +
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKF-------IKKRRTKSSRRGVSRE 59
Query: 366 QVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXX 425
+ E+ +L + HPN++ L + + IL+ E + G L L + L
Sbjct: 60 DIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEAT 117
Query: 426 XXXXXXXXXXXYLHSAMNPPIYHRDIKSSNI-LLDYNY---RSKVADFGLSR---LGMTE 478
YLHS I H D+K NI LLD N R K+ DFGL+ G E
Sbjct: 118 EFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG-NE 173
Query: 479 SSHISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVV 515
+I GTP ++ P+ Y L ++D++S GV+
Sbjct: 174 FKNIF----GTPEFVAPEIVNYEPLGLEADMWSIGVI 206
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 87/198 (43%), Gaps = 13/198 (6%)
Query: 326 FSEKHRLGTGAYGTVYAGK-LHNDDWVAIK---RFRYRDTDSIDQVMNEIKLLSSVSHPN 381
F LGTG++G V K + + A+K + + I+ +NE ++L +V+ P
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 382 LLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSA 441
L++L + +V E++ G + HL+R P YLHS
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLHSL 160
Query: 442 MNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYF 501
+ +RD+K N+L+D +V DFG ++ + + GTP YL P+
Sbjct: 161 ---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----GTPEYLAPEIILSK 213
Query: 502 HLSDKSDVYSFGVVLIEI 519
+ D ++ GV++ E+
Sbjct: 214 GYNKAVDWWALGVLIYEM 231
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 85/196 (43%), Gaps = 11/196 (5%)
Query: 332 LGTGAYGTV-YAGKLHNDDWVAIKRFRY-RDTDSIDQVMNEIKLLSSVSHPNLLRLLGCC 389
LG GAYG V A ++ VA+K R D + + EI + ++H N+++ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 390 IEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHR 449
E L E+ G L + E G+P YLH I HR
Sbjct: 74 REGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDAQRFFHQLMAGVVYLHGI---GITHR 128
Query: 450 DIKSSNILLDYNYRSKVADFGLSRL-GMTESSHISTAPQGTPGYLDPQY--HQYFHLSDK 506
DIK N+LLD K++DFGL+ + + GT Y+ P+ + FH ++
Sbjct: 129 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH-AEP 187
Query: 507 SDVYSFGVVLIEIITA 522
DV+S G+VL ++
Sbjct: 188 VDVWSCGIVLTAMLAG 203
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 85/196 (43%), Gaps = 11/196 (5%)
Query: 332 LGTGAYGTV-YAGKLHNDDWVAIKRFRY-RDTDSIDQVMNEIKLLSSVSHPNLLRLLGCC 389
LG GAYG V A ++ VA+K R D + + EI + ++H N+++ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 390 IEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHR 449
E L E+ G L + E G+P YLH I HR
Sbjct: 74 REGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDAQRFFHQLMAGVVYLHGI---GITHR 128
Query: 450 DIKSSNILLDYNYRSKVADFGLSRL-GMTESSHISTAPQGTPGYLDPQY--HQYFHLSDK 506
DIK N+LLD K++DFGL+ + + GT Y+ P+ + FH ++
Sbjct: 129 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH-AEP 187
Query: 507 SDVYSFGVVLIEIITA 522
DV+S G+VL ++
Sbjct: 188 VDVWSCGIVLTAMLAG 203
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 96/234 (41%), Gaps = 29/234 (12%)
Query: 309 SSVPFYPYKEIEKATSFFSEKHRLGTGAYGTVYAG------KLHNDDWVAIKRF-RYRDT 361
S+ Y E E A + LG G++G VY G K + VAIK
Sbjct: 4 SAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASM 63
Query: 362 DSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILV-YEFMPNGTLCQHLQ--RERGSG 418
+ +NE ++ + +++RLLG + +G+P LV E M G L +L+ R
Sbjct: 64 RERIEFLNEASVMKEFNCHHVVRLLGV-VSQGQPTLVIMELMTRGDLKSYLRSLRPEMEN 122
Query: 419 LP------WXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLS 472
P YL++ HRD+ + N ++ ++ K+ DFG++
Sbjct: 123 NPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMT 179
Query: 473 RLGMTESSHISTAPQGTPGYLDPQYHQYFHLSDK-----SDVYSFGVVLIEIIT 521
R + +G G L ++ L D SDV+SFGVVL EI T
Sbjct: 180 R----DIXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 85/195 (43%), Gaps = 18/195 (9%)
Query: 332 LGTGAYGTVY------AGKLHNDDWVAIKRFRY-RDTDSIDQVMNEIKLLSSVSHPNLLR 384
LG+G + V GK + ++ +R R S +++ E+ +L + HPN++
Sbjct: 13 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIIT 72
Query: 385 LLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNP 444
L + + +L+ E + G L L + L YLHS
Sbjct: 73 LHDIFENKTDVVLILELVSGGELFDFLAEK--ESLTEDEATQFLKQILDGVHYLHSKR-- 128
Query: 445 PIYHRDIKSSNI-LLDYNY---RSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQY 500
I H D+K NI LLD N R K+ DFG++ E+ + GTP ++ P+ Y
Sbjct: 129 -IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAH--KIEAGNEFKNIFGTPEFVAPEIVNY 185
Query: 501 FHLSDKSDVYSFGVV 515
L ++D++S GV+
Sbjct: 186 EPLGLEADMWSIGVI 200
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 89/217 (41%), Gaps = 38/217 (17%)
Query: 320 EKATSFFSEKHRLGTGAYGTV-----------YAGKLHNDDWVAIKRFRYRDTD---SID 365
E ++ LG+G + V YA K IK+ R + + S +
Sbjct: 7 ENVDDYYDTGEELGSGVFAVVKKCREKSTGLQYAAKF-------IKKRRTKSSRRGVSRE 59
Query: 366 QVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXX 425
+ E+ +L + HPN++ L + + IL+ E + G L L + L
Sbjct: 60 DIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEAT 117
Query: 426 XXXXXXXXXXXYLHSAMNPPIYHRDIKSSNI-LLDYNY---RSKVADFGLSR---LGMTE 478
YLHS I H D+K NI LLD N R K+ DFGL+ G E
Sbjct: 118 EFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG-NE 173
Query: 479 SSHISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVV 515
+I GTP ++ P+ Y L ++D++S GV+
Sbjct: 174 FKNIF----GTPEFVAPEIVNYEPLGLEADMWSIGVI 206
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 85/195 (43%), Gaps = 18/195 (9%)
Query: 332 LGTGAYGTVY------AGKLHNDDWVAIKRFRY-RDTDSIDQVMNEIKLLSSVSHPNLLR 384
LG+G + V GK + ++ +R R S +++ E+ +L + HPN++
Sbjct: 34 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREIRHPNIIT 93
Query: 385 LLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNP 444
L + + +L+ E + G L L + L YLHS
Sbjct: 94 LHDIFENKTDVVLILELVSGGELFDFLAEK--ESLTEDEATQFLKQILDGVHYLHSKR-- 149
Query: 445 PIYHRDIKSSNI-LLDYNY---RSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQY 500
I H D+K NI LLD N R K+ DFG++ E+ + GTP ++ P+ Y
Sbjct: 150 -IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAH--KIEAGNEFKNIFGTPEFVAPEIVNY 206
Query: 501 FHLSDKSDVYSFGVV 515
L ++D++S GV+
Sbjct: 207 EPLGLEADMWSIGVI 221
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 85/205 (41%), Gaps = 27/205 (13%)
Query: 326 FSEKHRLGTGAYGTV-----------YAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLL 374
F LGTG++G V YA K+ + V I+ +NE ++L
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVV-------KLKQIEHTLNEKRIL 95
Query: 375 SSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXX 434
+V+ P L++L + +V E++ G + HL+R P
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP--HARFYAAQIVLT 153
Query: 435 XXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLD 494
YLHS + +RD+K N+L+D +V DFG ++ + + GTP YL
Sbjct: 154 FEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLX----GTPEYLA 206
Query: 495 PQYHQYFHLSDKSDVYSFGVVLIEI 519
P+ + D ++ GV++ E+
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 89/217 (41%), Gaps = 38/217 (17%)
Query: 320 EKATSFFSEKHRLGTGAYGTV-----------YAGKLHNDDWVAIKRFRYRDTD---SID 365
E ++ LG+G + V YA K IK+ R + + S +
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKF-------IKKRRTKSSRRGVSRE 59
Query: 366 QVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXX 425
+ E+ +L + HPN++ L + + IL+ E + G L L + L
Sbjct: 60 DIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEAT 117
Query: 426 XXXXXXXXXXXYLHSAMNPPIYHRDIKSSNI-LLDYNY---RSKVADFGLSR---LGMTE 478
YLHS I H D+K NI LLD N R K+ DFGL+ G E
Sbjct: 118 EFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG-NE 173
Query: 479 SSHISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVV 515
+I GTP ++ P+ Y L ++D++S GV+
Sbjct: 174 FKNIF----GTPEFVAPEIVNYEPLGLEADMWSIGVI 206
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 83/208 (39%), Gaps = 20/208 (9%)
Query: 317 KEIEKATSFFSEKHRLGTGAYGTVY------AGKLHNDDWVAIKRFRYRDTDSIDQVMNE 370
K+ E F K LGTGA+ V GKL + K + +++ + NE
Sbjct: 15 KQAEDIKKIFEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKES----SIENE 70
Query: 371 IKLLSSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXX 430
I +L + H N++ L LV + + G L + E+G
Sbjct: 71 IAVLRKIKHENIVALEDIYESPNHLYLVMQLVSGGELFDRIV-EKGFYTE-KDASTLIRQ 128
Query: 431 XXXXXXYLHSAMNPPIYHRDIKSSNILL---DYNYRSKVADFGLSRLGMTESSHISTAPQ 487
YLH I HRD+K N+L D + ++DFGLS+ M + +
Sbjct: 129 VLDAVYYLHRM---GIVHRDLKPENLLYYSQDEESKIMISDFGLSK--MEGKGDVMSTAC 183
Query: 488 GTPGYLDPQYHQYFHLSDKSDVYSFGVV 515
GTPGY+ P+ S D +S GV+
Sbjct: 184 GTPGYVAPEVLAQKPYSKAVDCWSIGVI 211
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 102/233 (43%), Gaps = 27/233 (11%)
Query: 309 SSVPFYPYKEIEKATSFFSEKHRLGTGAYGTVYAG------KLHNDDWVAIKRFRYRDTD 362
S+ Y E E A + LG G++G VY G K + VAIK +
Sbjct: 4 SAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVN--EAA 61
Query: 363 SIDQ---VMNEIKLLSSVSHPNLLRLLGCCIEEGEPILV-YEFMPNGTLCQHLQ--RERG 416
S+ + +NE ++ + +++RLLG + +G+P LV E M G L +L+ R
Sbjct: 62 SMRERIEFLNEASVMKEFNCHHVVRLLGV-VSQGQPTLVIMELMTRGDLKSYLRSLRPEM 120
Query: 417 SGLP------WXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFG 470
P YL++ HRD+ + N ++ ++ K+ DFG
Sbjct: 121 ENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFG 177
Query: 471 LSRLGMTESSHISTAPQGT--PGYLDPQYHQYFHLSDKSDVYSFGVVLIEIIT 521
++R + E+ + +G ++ P+ + + SDV+SFGVVL EI T
Sbjct: 178 MTR-DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 102/233 (43%), Gaps = 27/233 (11%)
Query: 309 SSVPFYPYKEIEKATSFFSEKHRLGTGAYGTVYAG------KLHNDDWVAIKRFRYRDTD 362
S+ Y E E A + LG G++G VY G K + VAIK +
Sbjct: 3 SAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVN--EAA 60
Query: 363 SIDQ---VMNEIKLLSSVSHPNLLRLLGCCIEEGEPILV-YEFMPNGTLCQHLQ--RERG 416
S+ + +NE ++ + +++RLLG + +G+P LV E M G L +L+ R
Sbjct: 61 SMRERIEFLNEASVMKEFNCHHVVRLLGV-VSQGQPTLVIMELMTRGDLKSYLRSLRPEM 119
Query: 417 SGLP------WXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFG 470
P YL++ HRD+ + N ++ ++ K+ DFG
Sbjct: 120 ENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFG 176
Query: 471 LSRLGMTESSHISTAPQGT--PGYLDPQYHQYFHLSDKSDVYSFGVVLIEIIT 521
++R + E+ + +G ++ P+ + + SDV+SFGVVL EI T
Sbjct: 177 MTR-DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 85/205 (41%), Gaps = 27/205 (13%)
Query: 326 FSEKHRLGTGAYGTV-----------YAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLL 374
F LGTG++G V YA K+ + V I+ +NE ++L
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVV-------KLKQIEHTLNEKRIL 95
Query: 375 SSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXX 434
+V+ P L++L + +V E++ G + HL+R P
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEP--HARFYAAQIVLT 153
Query: 435 XXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLD 494
YLHS + +RD+K N+L+D +V DFG ++ + + GTP YL
Sbjct: 154 FEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----GTPEYLA 206
Query: 495 PQYHQYFHLSDKSDVYSFGVVLIEI 519
P+ + D ++ GV++ E+
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 89/217 (41%), Gaps = 38/217 (17%)
Query: 320 EKATSFFSEKHRLGTGAYGTV-----------YAGKLHNDDWVAIKRFRYRDTD---SID 365
E ++ LG+G + V YA K IK+ R + + S +
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKF-------IKKRRTKSSRRGVSRE 59
Query: 366 QVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXX 425
+ E+ +L + HPN++ L + + IL+ E + G L L + L
Sbjct: 60 DIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEAT 117
Query: 426 XXXXXXXXXXXYLHSAMNPPIYHRDIKSSNI-LLDYNY---RSKVADFGLSR---LGMTE 478
YLHS I H D+K NI LLD N R K+ DFGL+ G E
Sbjct: 118 EFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG-NE 173
Query: 479 SSHISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVV 515
+I GTP ++ P+ Y L ++D++S GV+
Sbjct: 174 FKNIF----GTPEFVAPEIVNYEPLGLEADMWSIGVI 206
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 102/233 (43%), Gaps = 27/233 (11%)
Query: 309 SSVPFYPYKEIEKATSFFSEKHRLGTGAYGTVYAG------KLHNDDWVAIKRFRYRDTD 362
S+ Y E E A + LG G++G VY G K + VAIK +
Sbjct: 3 SAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVN--EAA 60
Query: 363 SIDQ---VMNEIKLLSSVSHPNLLRLLGCCIEEGEPILV-YEFMPNGTLCQHLQ--RERG 416
S+ + +NE ++ + +++RLLG + +G+P LV E M G L +L+ R
Sbjct: 61 SMRERIEFLNEASVMKEFNCHHVVRLLGV-VSQGQPTLVIMELMTRGDLKSYLRSLRPEM 119
Query: 417 SGLP------WXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFG 470
P YL++ HRD+ + N ++ ++ K+ DFG
Sbjct: 120 ENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFG 176
Query: 471 LSRLGMTESSHISTAPQGT--PGYLDPQYHQYFHLSDKSDVYSFGVVLIEIIT 521
++R + E+ + +G ++ P+ + + SDV+SFGVVL EI T
Sbjct: 177 MTR-DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 92/200 (46%), Gaps = 23/200 (11%)
Query: 332 LGTGAYGTV---YAGKLHNDDWVAIKRFR--YRDTDSIDQVMNEIKLLSSVSHPNLLRLL 386
+G+GA G V Y L D VAIK+ +++ + E+ L+ V+H N++ LL
Sbjct: 70 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 127
Query: 387 GC-----CIEEGEPI-LVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHS 440
+EE + + LV E M + LCQ +Q E L +LHS
Sbjct: 128 NVFTPQKTLEEFQDVYLVMELM-DANLCQVIQME----LDHERMSYLLYQMLCGIKHLHS 182
Query: 441 AMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQY 500
A I HRD+K SNI++ + K+ DFGL+R T S + T T Y P+
Sbjct: 183 A---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMMTPYVVTRYYRAPEVILG 237
Query: 501 FHLSDKSDVYSFGVVLIEII 520
+ D++S G ++ E++
Sbjct: 238 MGYKENVDIWSVGCIMGEMV 257
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 90/199 (45%), Gaps = 21/199 (10%)
Query: 332 LGTGAYGTV---YAGKLHNDDWVAIKRFR--YRDTDSIDQVMNEIKLLSSVSHPNLLRLL 386
+G+GA G V Y L + VAIK+ +++ + E+ L+ V+H N++ LL
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLL 89
Query: 387 GC-----CIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSA 441
+EE + + + + + L Q +Q E L +LHSA
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDANLSQVIQME----LDHERMSYLLYQMLVGIKHLHSA 145
Query: 442 MNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYF 501
I HRD+K SNI++ + K+ DFGL+R T S + T T Y P+
Sbjct: 146 ---GIIHRDLKPSNIVVKSDATLKILDFGLARTAGT--SFMMTPYVVTRYYRAPEVILGM 200
Query: 502 HLSDKSDVYSFGVVLIEII 520
+ D++S GV++ E+I
Sbjct: 201 GYKENVDIWSVGVIMGEMI 219
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 93/214 (43%), Gaps = 23/214 (10%)
Query: 324 SFFSEKHRLGT----GAYGTVYAGK---LHNDDWVAIKRFRY---RDTDSIDQVMNEIKL 373
S S+++ LG G V+ + LH D VA+K R RD + E +
Sbjct: 8 SHLSDRYELGEILGFGGMSEVHLARDLRLHRD--VAVKVLRADLARDPSFYLRFRREAQN 65
Query: 374 LSSVSHPNLLRLLGCCIEEGE----PILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXX 429
++++HP ++ + E P +V E++ +G + + G P
Sbjct: 66 AAALNHPAIVAVYATGEAETPAGPLPYIVMEYV-DGVTLRDIVHTEGPMTPKRAIEVIAD 124
Query: 430 XXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHIS--TAPQ 487
L+ + I HRD+K +NI++ KV DFG++R + ++ A
Sbjct: 125 ACQA----LNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVI 180
Query: 488 GTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIIT 521
GT YL P+ + + +SDVYS G VL E++T
Sbjct: 181 GTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLT 214
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 446 IYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHI--STAPQGTPGYLDPQYHQYFHL 503
I HRD+K +NIL+ KV DFG++R + + + A GT YL P+ + +
Sbjct: 137 IIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARGDSV 196
Query: 504 SDKSDVYSFGVVLIEIIT 521
+SDVYS G VL E++T
Sbjct: 197 DARSDVYSLGCVLYEVLT 214
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 89/217 (41%), Gaps = 38/217 (17%)
Query: 320 EKATSFFSEKHRLGTGAYGTV-----------YAGKLHNDDWVAIKRFRYRDTD---SID 365
E ++ LG+G + V YA K IK+ R + + S +
Sbjct: 7 ENVDDYYDTGEELGSGKFAVVKKCREKSTGLQYAAKF-------IKKRRTKSSRRGVSRE 59
Query: 366 QVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXX 425
+ E+ +L + HPN++ L + + IL+ E + G L L + L
Sbjct: 60 DIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEAT 117
Query: 426 XXXXXXXXXXXYLHSAMNPPIYHRDIKSSNI-LLDYNY---RSKVADFGLSR---LGMTE 478
YLHS I H D+K NI LLD N R K+ DFGL+ G E
Sbjct: 118 EFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG-NE 173
Query: 479 SSHISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVV 515
+I GTP ++ P+ Y L ++D++S GV+
Sbjct: 174 FKNIF----GTPEFVAPEIVNYEPLGLEADMWSIGVI 206
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 90/199 (45%), Gaps = 21/199 (10%)
Query: 332 LGTGAYGTV---YAGKLHNDDWVAIKRFR--YRDTDSIDQVMNEIKLLSSVSHPNLLRLL 386
+G+GA G V Y L + VAIK+ +++ + E+ L+ V+H N++ LL
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 387 GC-----CIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSA 441
+EE + + + + + LCQ +Q E L +LHSA
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDANLCQVIQME----LDHERMSYLLYQMLCGIKHLHSA 145
Query: 442 MNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYF 501
I HRD+K SNI++ + K+ DFGL+R T S + T T Y P+
Sbjct: 146 ---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMMTPYVVTRYYRAPEVILGM 200
Query: 502 HLSDKSDVYSFGVVLIEII 520
+ D++S G ++ E+I
Sbjct: 201 GYKENVDIWSVGCIMGEMI 219
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 89/217 (41%), Gaps = 38/217 (17%)
Query: 320 EKATSFFSEKHRLGTGAYGTV-----------YAGKLHNDDWVAIKRFRYRDTD---SID 365
E ++ LG+G + V YA K IK+ R + + S +
Sbjct: 6 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKF-------IKKRRTKSSRRGVSRE 58
Query: 366 QVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXX 425
+ E+ +L + HPN++ L + + IL+ E + G L L + L
Sbjct: 59 DIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEAT 116
Query: 426 XXXXXXXXXXXYLHSAMNPPIYHRDIKSSNI-LLDYNY---RSKVADFGLSR---LGMTE 478
YLHS I H D+K NI LLD N R K+ DFGL+ G E
Sbjct: 117 EFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG-NE 172
Query: 479 SSHISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVV 515
+I GTP ++ P+ Y L ++D++S GV+
Sbjct: 173 FKNIF----GTPEFVAPEIVNYEPLGLEADMWSIGVI 205
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 90/199 (45%), Gaps = 21/199 (10%)
Query: 332 LGTGAYGTV---YAGKLHNDDWVAIKRFR--YRDTDSIDQVMNEIKLLSSVSHPNLLRLL 386
+G+GA G V Y L + VAIK+ +++ + E+ L+ V+H N++ LL
Sbjct: 33 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 90
Query: 387 GC-----CIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSA 441
+EE + + + + + LCQ +Q E L +LHSA
Sbjct: 91 NVFTPQKSLEEFQDVYIVMELMDANLCQVIQME----LDHERMSYLLYQMLCGIKHLHSA 146
Query: 442 MNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYF 501
I HRD+K SNI++ + K+ DFGL+R T S + T T Y P+
Sbjct: 147 ---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMMTPYVVTRYYRAPEVILGM 201
Query: 502 HLSDKSDVYSFGVVLIEII 520
+ D++S G ++ E+I
Sbjct: 202 GYKENVDIWSVGCIMGEMI 220
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 89/217 (41%), Gaps = 38/217 (17%)
Query: 320 EKATSFFSEKHRLGTGAYGTV-----------YAGKLHNDDWVAIKRFRYRDTD---SID 365
E ++ LG+G + V YA K IK+ R + + S +
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKF-------IKKRRTKSSRRGVSRE 59
Query: 366 QVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXX 425
+ E+ +L + HPN++ L + + IL+ E + G L L + L
Sbjct: 60 DIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEAT 117
Query: 426 XXXXXXXXXXXYLHSAMNPPIYHRDIKSSNI-LLDYNY---RSKVADFGLSR---LGMTE 478
YLHS I H D+K NI LLD N R K+ DFGL+ G E
Sbjct: 118 EFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG-NE 173
Query: 479 SSHISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVV 515
+I GTP ++ P+ Y L ++D++S GV+
Sbjct: 174 FKNIF----GTPEFVAPEIVNYEPLGLEADMWSIGVI 206
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 89/217 (41%), Gaps = 38/217 (17%)
Query: 320 EKATSFFSEKHRLGTGAYGTV-----------YAGKLHNDDWVAIKRFRYRDTD---SID 365
E ++ LG+G + V YA K IK+ R + + S +
Sbjct: 6 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKF-------IKKRRTKSSRRGVSRE 58
Query: 366 QVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXX 425
+ E+ +L + HPN++ L + + IL+ E + G L L + L
Sbjct: 59 DIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEAT 116
Query: 426 XXXXXXXXXXXYLHSAMNPPIYHRDIKSSNI-LLDYNY---RSKVADFGLSR---LGMTE 478
YLHS I H D+K NI LLD N R K+ DFGL+ G E
Sbjct: 117 EFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG-NE 172
Query: 479 SSHISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVV 515
+I GTP ++ P+ Y L ++D++S GV+
Sbjct: 173 FKNIF----GTPEFVAPEIVNYEPLGLEADMWSIGVI 205
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 85/195 (43%), Gaps = 18/195 (9%)
Query: 332 LGTGAYGTVY------AGKLHNDDWVAIKRFRY-RDTDSIDQVMNEIKLLSSVSHPNLLR 384
LG+G + V GK + ++ +R R S +++ E+ +L + HPN++
Sbjct: 20 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIIT 79
Query: 385 LLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNP 444
L + + +L+ E + G L L + L YLHS
Sbjct: 80 LHDIFENKTDVVLILELVSGGELFDFLAEK--ESLTEDEATQFLKQILDGVHYLHSKR-- 135
Query: 445 PIYHRDIKSSNI-LLDYNY---RSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQY 500
I H D+K NI LLD N R K+ DFG++ E+ + GTP ++ P+ Y
Sbjct: 136 -IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAH--KIEAGNEFKNIFGTPEFVAPEIVNY 192
Query: 501 FHLSDKSDVYSFGVV 515
L ++D++S GV+
Sbjct: 193 EPLGLEADMWSIGVI 207
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 89/217 (41%), Gaps = 38/217 (17%)
Query: 320 EKATSFFSEKHRLGTGAYGTV-----------YAGKLHNDDWVAIKRFRYRDTD---SID 365
E ++ LG+G + V YA K IK+ R + + S +
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKF-------IKKRRTKSSRRGVSRE 59
Query: 366 QVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXX 425
+ E+ +L + HPN++ L + + IL+ E + G L L + L
Sbjct: 60 DIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEAT 117
Query: 426 XXXXXXXXXXXYLHSAMNPPIYHRDIKSSNI-LLDYNY---RSKVADFGLSR---LGMTE 478
YLHS I H D+K NI LLD N R K+ DFGL+ G E
Sbjct: 118 EFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG-NE 173
Query: 479 SSHISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVV 515
+I GTP ++ P+ Y L ++D++S GV+
Sbjct: 174 FKNIF----GTPEFVAPEIVNYEPLGLEADMWSIGVI 206
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 89/217 (41%), Gaps = 38/217 (17%)
Query: 320 EKATSFFSEKHRLGTGAYGTV-----------YAGKLHNDDWVAIKRFRYRDTD---SID 365
E ++ LG+G + V YA K IK+ R + + S +
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKF-------IKKRRTKSSRRGVSRE 59
Query: 366 QVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXX 425
+ E+ +L + HPN++ L + + IL+ E + G L L + L
Sbjct: 60 DIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEAT 117
Query: 426 XXXXXXXXXXXYLHSAMNPPIYHRDIKSSNI-LLDYNY---RSKVADFGLSR---LGMTE 478
YLHS I H D+K NI LLD N R K+ DFGL+ G E
Sbjct: 118 EFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG-NE 173
Query: 479 SSHISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVV 515
+I GTP ++ P+ Y L ++D++S GV+
Sbjct: 174 FKNIF----GTPEFVAPEIVNYEPLGLEADMWSIGVI 206
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 102/233 (43%), Gaps = 27/233 (11%)
Query: 309 SSVPFYPYKEIEKATSFFSEKHRLGTGAYGTVYAG------KLHNDDWVAIKRFRYRDTD 362
S+ Y E E A + LG G++G VY G K + VAIK +
Sbjct: 10 SAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVN--EAA 67
Query: 363 SIDQ---VMNEIKLLSSVSHPNLLRLLGCCIEEGEPILV-YEFMPNGTLCQHLQRERGSG 418
S+ + +NE ++ + +++RLLG + +G+P LV E M G L +L+ R +
Sbjct: 68 SMRERIEFLNEASVMKEFNCHHVVRLLGV-VSQGQPTLVIMELMTRGDLKSYLRSLRPAM 126
Query: 419 L--------PWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFG 470
YL++ HRD+ + N ++ ++ K+ DFG
Sbjct: 127 ANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFG 183
Query: 471 LSRLGMTESSHISTAPQGT--PGYLDPQYHQYFHLSDKSDVYSFGVVLIEIIT 521
++R + E+ + +G ++ P+ + + SDV+SFGVVL EI T
Sbjct: 184 MTR-DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 115/268 (42%), Gaps = 35/268 (13%)
Query: 278 VALLCYCFRKRSTSLRNQLSAKRLLCQAAGN----SSVPFYPYKEIEKATSFFSEKHRLG 333
+ ++ Y F ++ RN + A+ N S+ Y E E A + LG
Sbjct: 1 LVIMLYVFHRK----RNNSRLGNGVLYASVNPEYFSAADVYVPDEWEVAREKITMSRELG 56
Query: 334 TGAYGTVYAG------KLHNDDWVAIKRFRYRDTDSIDQ---VMNEIKLLSSVSHPNLLR 384
G++G VY G K + VAIK + S+ + +NE ++ + +++R
Sbjct: 57 QGSFGMVYEGVAKGVVKDEPETRVAIKTVN--EAASMRERIEFLNEASVMKEFNCHHVVR 114
Query: 385 LLGCCIEEGEPILV-YEFMPNGTLCQHLQ--RERGSGLP------WXXXXXXXXXXXXXX 435
LLG + +G+P LV E M G L +L+ R P
Sbjct: 115 LLGV-VSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 173
Query: 436 XYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGT--PGYL 493
YL++ HRD+ + N ++ ++ K+ DFG++R + E+ + +G ++
Sbjct: 174 AYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR-DIYETDYYRKGGKGLLPVRWM 229
Query: 494 DPQYHQYFHLSDKSDVYSFGVVLIEIIT 521
P+ + + SDV+SFGVVL EI T
Sbjct: 230 SPESLKDGVFTTYSDVWSFGVVLWEIAT 257
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 85/205 (41%), Gaps = 27/205 (13%)
Query: 326 FSEKHRLGTGAYGTV-----------YAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLL 374
F LGTG++G V YA K+ + V I+ +NE ++L
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVV-------KLKQIEHTLNEKRIL 95
Query: 375 SSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXX 434
+V+ P L++L + +V E++ G + HL+R P
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP--HARFYAAQIVLT 153
Query: 435 XXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLD 494
YLHS + +RD+K N+L+D +V DFG ++ + + GTP YL
Sbjct: 154 FEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----GTPEYLA 206
Query: 495 PQYHQYFHLSDKSDVYSFGVVLIEI 519
P+ + D ++ GV++ E+
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 86/197 (43%), Gaps = 10/197 (5%)
Query: 332 LGTGAYGTV-YAGKLHNDDWVAIKRFRYR---DTDSIDQVMNEIKLLSSVSHPNLLRLLG 387
LG G++ TV A +L AIK R + + V E ++S + HP ++L
Sbjct: 45 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 104
Query: 388 CCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIY 447
C ++ + + NG L +++ R+ GS YLH I
Sbjct: 105 CFQDDEKLYFGLSYAKNGELLKYI-RKIGS-FDETCTRFYTAEIVSALEYLHGK---GII 159
Query: 448 HRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHI-STAPQGTPGYLDPQYHQYFHLSDK 506
HRD+K NILL+ + ++ DFG +++ ES + GT Y+ P+
Sbjct: 160 HRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKS 219
Query: 507 SDVYSFGVVLIEIITAL 523
SD+++ G ++ +++ L
Sbjct: 220 SDLWALGCIIYQLVAGL 236
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 100/228 (43%), Gaps = 27/228 (11%)
Query: 314 YPYKEIEKATSFFSEKHRLGTGAYGTVYAG------KLHNDDWVAIKRFRYRDTDSIDQ- 366
Y E E A + LG G++G VY G K + VAIK + S+ +
Sbjct: 5 YVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVN--EAASMRER 62
Query: 367 --VMNEIKLLSSVSHPNLLRLLGCCIEEGEPILV-YEFMPNGTLCQHLQRERGSGL---- 419
+NE ++ + +++RLLG + +G+P LV E M G L +L+ R +
Sbjct: 63 IEFLNEASVMKEFNCHHVVRLLGV-VSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPV 121
Query: 420 ----PWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLG 475
YL++ HRD+ + N ++ ++ K+ DFG++R
Sbjct: 122 LAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR-D 177
Query: 476 MTESSHISTAPQGT--PGYLDPQYHQYFHLSDKSDVYSFGVVLIEIIT 521
+ E+ + +G ++ P+ + + SDV+SFGVVL EI T
Sbjct: 178 IYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 225
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 93/205 (45%), Gaps = 11/205 (5%)
Query: 324 SFF--SEKHRLGTGAYGTVYA-GKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHP 380
SF+ S+ LG G +G V+ + +A K + R ++V NEI +++ + H
Sbjct: 87 SFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHA 146
Query: 381 NLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHS 440
NL++L + + +LV E++ G L + E L ++H
Sbjct: 147 NLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDE-SYNLTELDTILFMKQICEGIRHMHQ 205
Query: 441 AMNPPIYHRDIKSSNIL-LDYNYRS-KVADFGLSRLGMTESSHISTAPQGTPGYLDPQYH 498
I H D+K NIL ++ + + K+ DFGL+R + GTP +L P+
Sbjct: 206 MY---ILHLDLKPENILCVNRDAKQIKIIDFGLAR--RYKPREKLKVNFGTPEFLAPEVV 260
Query: 499 QYFHLSDKSDVYSFGVVLIEIITAL 523
Y +S +D++S GV+ +++ L
Sbjct: 261 NYDFVSFPTDMWSVGVIAYMLLSGL 285
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 85/205 (41%), Gaps = 27/205 (13%)
Query: 326 FSEKHRLGTGAYGTV-----------YAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLL 374
F LGTG++G V YA K+ + V I+ +NE ++L
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVV-------KLKQIEHTLNEKRIL 95
Query: 375 SSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXX 434
+V+ P L++L + +V E++ G + HL+R P
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEP--HARFYAAQIVLT 153
Query: 435 XXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLD 494
YLHS + +RD+K N+L+D +V DFG ++ + + GTP YL
Sbjct: 154 FEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----GTPEYLA 206
Query: 495 PQYHQYFHLSDKSDVYSFGVVLIEI 519
P+ + D ++ GV++ E+
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 85/205 (41%), Gaps = 27/205 (13%)
Query: 326 FSEKHRLGTGAYGTV-----------YAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLL 374
F LGTG++G V YA K+ + V I+ +NE ++L
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVV-------KLKQIEHTLNEKRIL 95
Query: 375 SSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXX 434
+V+ P L++L + +V E++ G + HL+R P
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP--HARFYAAQIVLT 153
Query: 435 XXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLD 494
YLHS + +RD+K N+L+D +V DFG ++ + + GTP YL
Sbjct: 154 FEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----GTPEYLA 206
Query: 495 PQYHQYFHLSDKSDVYSFGVVLIEI 519
P+ + D ++ GV++ E+
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 85/205 (41%), Gaps = 27/205 (13%)
Query: 326 FSEKHRLGTGAYGTV-----------YAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLL 374
F LGTG++G V YA K+ + V I+ +NE ++L
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVV-------KLKQIEHTLNEKRIL 95
Query: 375 SSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXX 434
+V+ P L++L + +V E++ G + HL+R P
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP--HARFYAAQIVLT 153
Query: 435 XXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLD 494
YLHS + +RD+K N+L+D +V DFG ++ + + GTP YL
Sbjct: 154 FEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----GTPEYLA 206
Query: 495 PQYHQYFHLSDKSDVYSFGVVLIEI 519
P+ + D ++ GV++ E+
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 90/199 (45%), Gaps = 21/199 (10%)
Query: 332 LGTGAYGTV---YAGKLHNDDWVAIKRFR--YRDTDSIDQVMNEIKLLSSVSHPNLLRLL 386
+G+GA G V Y L + VAIK+ +++ + E+ L+ V+H N++ LL
Sbjct: 32 IGSGAQGIVVAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLL 89
Query: 387 GC-----CIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSA 441
+EE + + + + + L Q +Q E L +LHSA
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDANLSQVIQME----LDHERMSYLLYQMLVGIKHLHSA 145
Query: 442 MNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYF 501
I HRD+K SNI++ + K+ DFGL+R T S + T T Y P+
Sbjct: 146 ---GIIHRDLKPSNIVVKSDATLKILDFGLARTAGT--SFMMTPYVVTRYYRAPEVILGM 200
Query: 502 HLSDKSDVYSFGVVLIEII 520
+ D++S GV++ E+I
Sbjct: 201 GYKENVDIWSVGVIMGEMI 219
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 97/212 (45%), Gaps = 22/212 (10%)
Query: 332 LGTGAYGTVYA----GKLHNDDW--VAIKRFR-YRDTDSIDQVMNEIKLLSSV-SHPNLL 383
LG GA+G V G + +D VA+K + + +M+E+K+LS + +H N++
Sbjct: 31 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 90
Query: 384 RLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGL-----PWXXXXXXXXXXXXXXXYL 438
LLG C G +++ E+ G L L+R+R S + P
Sbjct: 91 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 150
Query: 439 HSAMNPPI--------YHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTP 490
+ + HRD+ + NILL + +K+ DFGL+R +S+++ P
Sbjct: 151 SYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLP 210
Query: 491 -GYLDPQYHQYFHLSDKSDVYSFGVVLIEIIT 521
++ P+ + +SDV+S+G+ L E+ +
Sbjct: 211 VKWMAPESIFNCVYTFESDVWSYGIFLWELFS 242
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 85/205 (41%), Gaps = 27/205 (13%)
Query: 326 FSEKHRLGTGAYGTV-----------YAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLL 374
F LGTG++G V YA K+ + V I+ +NE ++L
Sbjct: 44 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVV-------KLKQIEHTLNEKRIL 96
Query: 375 SSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXX 434
+V+ P L++L + +V E++ G + HL+R P
Sbjct: 97 QAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP--HARFYAAQIVLT 154
Query: 435 XXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLD 494
YLHS + +RD+K N+L+D +V DFG ++ + + GTP YL
Sbjct: 155 FEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----GTPEYLA 207
Query: 495 PQYHQYFHLSDKSDVYSFGVVLIEI 519
P+ + D ++ GV++ E+
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEM 232
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 98/228 (42%), Gaps = 31/228 (13%)
Query: 332 LGTGAYGTVYAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSV--SHPNLLRLLGCC 389
+G G YG V+ G ++ VA+K F RD S E +L ++V H N+L +
Sbjct: 16 VGKGRYGEVWRGSWQGEN-VAVKIFSSRDEKSW---FRETELYNTVMLRHENILGFIASD 71
Query: 390 I----EEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAM--- 442
+ + L+ + G+L +LQ + L +LH +
Sbjct: 72 MTSRHSSTQLWLITHYHEMGSLYDYLQL---TTLDTVSCLRIVLSIASGLAHLHIEIFGT 128
Query: 443 --NPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTA--PQ-GTPGYLDPQY 497
P I HRD+KS NIL+ N + +AD GL+ + ++ + P+ GT Y+ P+
Sbjct: 129 QGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEV 188
Query: 498 HQY------FHLSDKSDVYSFGVVLIEIITALK----VVDFSRPHSEV 535
F + D+++FG+VL E+ + V D+ P +V
Sbjct: 189 LDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDV 236
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 85/200 (42%), Gaps = 30/200 (15%)
Query: 332 LGTGAYGTV-----------YAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHP 380
LG GA+ V YA K+ N K+ RD +++ E ++ + HP
Sbjct: 12 LGKGAFSVVRRCMKIPTGQEYAAKIIN-----TKKLSARDHQKLER---EARICRLLKHP 63
Query: 381 NLLRLLGCCIEEGEPILVYEFMPNGTLCQHL-QRERGSGLPWXXXXXXXXXXXXXXXYLH 439
N++RL EEG LV++ + G L + + RE + H
Sbjct: 64 NIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREY-----YSEADASHCIQQILESVNH 118
Query: 440 SAMNPPIYHRDIKSSNILLDYNYRS---KVADFGLSRLGMTESSHISTAPQGTPGYLDPQ 496
+N I HRD+K N+LL + K+ADFGL+ + + GTPGYL P+
Sbjct: 119 CHLN-GIVHRDLKPENLLLASKSKGAAVKLADFGLA-IEVQGDQQAWFGFAGTPGYLSPE 176
Query: 497 YHQYFHLSDKSDVYSFGVVL 516
+ D+++ GV+L
Sbjct: 177 VLRKDPYGKPVDMWACGVIL 196
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 85/200 (42%), Gaps = 30/200 (15%)
Query: 332 LGTGAYGTV-----------YAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHP 380
LG GA+ V YA K+ N K+ RD +++ E ++ + HP
Sbjct: 39 LGKGAFSVVRRCVKKTPTQEYAAKIIN-----TKKLSARDHQKLER---EARICRLLKHP 90
Query: 381 NLLRLLGCCIEEGEPILVYEFMPNGTLCQHL-QRERGSGLPWXXXXXXXXXXXXXXXYLH 439
N++RL EEG LV++ + G L + + RE S ++H
Sbjct: 91 NIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSE---ADASHCIHQILESVNHIH 147
Query: 440 SAMNPPIYHRDIKSSNILLDYNYRS---KVADFGLSRLGMTESSHISTAPQGTPGYLDPQ 496
I HRD+K N+LL + K+ADFGL+ + + GTPGYL P+
Sbjct: 148 QH---DIVHRDLKPENLLLASKCKGAAVKLADFGLA-IEVQGEQQAWFGFAGTPGYLSPE 203
Query: 497 YHQYFHLSDKSDVYSFGVVL 516
+ D+++ GV+L
Sbjct: 204 VLRKDPYGKPVDIWACGVIL 223
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 92/200 (46%), Gaps = 23/200 (11%)
Query: 332 LGTGAYGTV---YAGKLHNDDWVAIKRFR--YRDTDSIDQVMNEIKLLSSVSHPNLLRLL 386
+G+GA G V Y L D VAIK+ +++ + E+ L+ V+H N++ LL
Sbjct: 33 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 90
Query: 387 GC-----CIEEGEPI-LVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHS 440
+EE + + LV E M + LCQ +Q E L +LHS
Sbjct: 91 NVFTPQKTLEEFQDVYLVMELM-DANLCQVIQME----LDHERMSYLLYQMLCGIKHLHS 145
Query: 441 AMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQY 500
A I HRD+K SNI++ + K+ DFGL+R T S + T T Y P+
Sbjct: 146 A---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMMTPYVVTRYYRAPEVILG 200
Query: 501 FHLSDKSDVYSFGVVLIEII 520
+ D++S G ++ E++
Sbjct: 201 MGYKENVDIWSVGCIMGEMV 220
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 85/205 (41%), Gaps = 27/205 (13%)
Query: 326 FSEKHRLGTGAYGTV-----------YAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLL 374
F LGTG++G V YA K+ + V I+ +NE ++L
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVV-------KLKQIEHTLNEKRIL 95
Query: 375 SSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXX 434
+V+ P L++L + +V E++ G + HL+R P
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP--HARFYAAQIVLT 153
Query: 435 XXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLD 494
YLHS + +RD+K N+L+D +V DFG ++ + + GTP YL
Sbjct: 154 FEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----GTPEYLA 206
Query: 495 PQYHQYFHLSDKSDVYSFGVVLIEI 519
P+ + D ++ GV++ E+
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 92/200 (46%), Gaps = 23/200 (11%)
Query: 332 LGTGAYGTV---YAGKLHNDDWVAIKRFR--YRDTDSIDQVMNEIKLLSSVSHPNLLRLL 386
+G+GA G V Y L D VAIK+ +++ + E+ L+ V+H N++ LL
Sbjct: 33 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 90
Query: 387 GC-----CIEEGEPI-LVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHS 440
+EE + + LV E M + LCQ +Q E L +LHS
Sbjct: 91 NVFTPQKTLEEFQDVYLVMELM-DANLCQVIQME----LDHERMSYLLYQMLCGIKHLHS 145
Query: 441 AMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQY 500
A I HRD+K SNI++ + K+ DFGL+R T S + T T Y P+
Sbjct: 146 A---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMMTPYVVTRYYRAPEVILG 200
Query: 501 FHLSDKSDVYSFGVVLIEII 520
+ D++S G ++ E++
Sbjct: 201 MGYKENVDIWSVGCIMGEMV 220
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 85/205 (41%), Gaps = 27/205 (13%)
Query: 326 FSEKHRLGTGAYGTV-----------YAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLL 374
F LGTG++G V YA K+ + V I+ +NE ++L
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVV-------KLKQIEHTLNEKRIL 95
Query: 375 SSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXX 434
+V+ P L++L + +V E++ G + HL+R P
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP--HARFYAAQIVLT 153
Query: 435 XXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLD 494
YLHS + +RD+K N+L+D +V DFG ++ + + GTP YL
Sbjct: 154 FEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----GTPEYLA 206
Query: 495 PQYHQYFHLSDKSDVYSFGVVLIEI 519
P+ + D ++ GV++ E+
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 97/212 (45%), Gaps = 22/212 (10%)
Query: 332 LGTGAYGTVYA----GKLHNDDW--VAIKRFR-YRDTDSIDQVMNEIKLLSSV-SHPNLL 383
LG GA+G V G + +D VA+K + + +M+E+K+LS + +H N++
Sbjct: 47 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 106
Query: 384 RLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGL-----PWXXXXXXXXXXXXXXXYL 438
LLG C G +++ E+ G L L+R+R S + P
Sbjct: 107 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 166
Query: 439 HSAMNPPI--------YHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTP 490
+ + HRD+ + NILL + +K+ DFGL+R +S+++ P
Sbjct: 167 SYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLP 226
Query: 491 -GYLDPQYHQYFHLSDKSDVYSFGVVLIEIIT 521
++ P+ + +SDV+S+G+ L E+ +
Sbjct: 227 VKWMAPESIFNCVYTFESDVWSYGIFLWELFS 258
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 92/200 (46%), Gaps = 23/200 (11%)
Query: 332 LGTGAYGTV---YAGKLHNDDWVAIKRFR--YRDTDSIDQVMNEIKLLSSVSHPNLLRLL 386
+G+GA G V Y L D VAIK+ +++ + E+ L+ V+H N++ LL
Sbjct: 31 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 88
Query: 387 GC-----CIEEGEPI-LVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHS 440
+EE + + LV E M + LCQ +Q E L +LHS
Sbjct: 89 NVFTPQKTLEEFQDVYLVMELM-DANLCQVIQME----LDHERMSYLLYQMLCGIKHLHS 143
Query: 441 AMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQY 500
A I HRD+K SNI++ + K+ DFGL+R T S + T T Y P+
Sbjct: 144 A---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMMTPYVVTRYYRAPEVILG 198
Query: 501 FHLSDKSDVYSFGVVLIEII 520
+ D++S G ++ E++
Sbjct: 199 MGYKENVDIWSVGCIMGEMV 218
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 92/200 (46%), Gaps = 23/200 (11%)
Query: 332 LGTGAYGTV---YAGKLHNDDWVAIKRFR--YRDTDSIDQVMNEIKLLSSVSHPNLLRLL 386
+G+GA G V Y L D VAIK+ +++ + E+ L+ V+H N++ LL
Sbjct: 32 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 89
Query: 387 GC-----CIEEGEPI-LVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHS 440
+EE + + LV E M + LCQ +Q E L +LHS
Sbjct: 90 NVFTPQKTLEEFQDVYLVMELM-DANLCQVIQME----LDHERMSYLLYQMLCGIKHLHS 144
Query: 441 AMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQY 500
A I HRD+K SNI++ + K+ DFGL+R T S + T T Y P+
Sbjct: 145 A---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMMTPYVVTRYYRAPEVILG 199
Query: 501 FHLSDKSDVYSFGVVLIEII 520
+ D++S G ++ E++
Sbjct: 200 MGYKENVDIWSVGCIMGEMV 219
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 90/199 (45%), Gaps = 21/199 (10%)
Query: 332 LGTGAYGTV---YAGKLHNDDWVAIKRFR--YRDTDSIDQVMNEIKLLSSVSHPNLLRLL 386
+G+GA G V Y L + VAIK+ +++ + E+ L+ V+H N++ LL
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 387 GC-----CIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSA 441
+EE + + + + + LCQ +Q E L +LHSA
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDANLCQVIQME----LDHERMSYLLYQMLCGIKHLHSA 145
Query: 442 MNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYF 501
I HRD+K SNI++ + K+ DFGL+R T S + T T Y P+
Sbjct: 146 ---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMMTPYVVTRYYRAPEVILGM 200
Query: 502 HLSDKSDVYSFGVVLIEII 520
+ D++S G ++ E+I
Sbjct: 201 GYKENVDIWSVGCIMGEMI 219
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 92/200 (46%), Gaps = 23/200 (11%)
Query: 332 LGTGAYGTV---YAGKLHNDDWVAIKRFR--YRDTDSIDQVMNEIKLLSSVSHPNLLRLL 386
+G+GA G V Y L D VAIK+ +++ + E+ L+ V+H N++ LL
Sbjct: 32 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 89
Query: 387 GC-----CIEEGEPI-LVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHS 440
+EE + + LV E M + LCQ +Q E L +LHS
Sbjct: 90 NVFTPQKTLEEFQDVYLVMELM-DANLCQVIQME----LDHERMSYLLYQMLCGIKHLHS 144
Query: 441 AMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQY 500
A I HRD+K SNI++ + K+ DFGL+R T S + T T Y P+
Sbjct: 145 A---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMMTPYVVTRYYRAPEVILG 199
Query: 501 FHLSDKSDVYSFGVVLIEII 520
+ D++S G ++ E++
Sbjct: 200 MGYKENVDIWSVGCIMGEMV 219
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 101/229 (44%), Gaps = 28/229 (12%)
Query: 313 FYPYKEIEKATSFFSEKHRLGTGAYGTVYAG------KLHNDDWVAIKRFRYRDTDSIDQ 366
F P E E A + LG G++G VY G K + VAIK + S+ +
Sbjct: 6 FVP-DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVN--EAASMRE 62
Query: 367 ---VMNEIKLLSSVSHPNLLRLLGCCIEEGEPILV-YEFMPNGTLCQHLQ--RERGSGLP 420
+NE ++ + +++RLLG + +G+P LV E M G L +L+ R P
Sbjct: 63 RIEFLNEASVMKEFNCHHVVRLLGV-VSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNP 121
Query: 421 ------WXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRL 474
YL++ HRD+ + N ++ ++ K+ DFG++R
Sbjct: 122 VLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR- 177
Query: 475 GMTESSHISTAPQGT--PGYLDPQYHQYFHLSDKSDVYSFGVVLIEIIT 521
+ E+ + +G ++ P+ + + SDV+SFGVVL EI T
Sbjct: 178 DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 226
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 85/205 (41%), Gaps = 27/205 (13%)
Query: 326 FSEKHRLGTGAYGTV-----------YAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLL 374
F LGTG++G V YA K+ + V I+ +NE ++L
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVV-------KLKQIEHTLNEKRIL 95
Query: 375 SSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXX 434
+V+ P L++L + +V E++ G + HL+R P
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEP--HARFYAAQIVLT 153
Query: 435 XXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLD 494
YLHS + +RD+K N+L+D +V DFG ++ + + GTP YL
Sbjct: 154 FEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----GTPEYLA 206
Query: 495 PQYHQYFHLSDKSDVYSFGVVLIEI 519
P+ + D ++ GV++ E+
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 98/228 (42%), Gaps = 31/228 (13%)
Query: 332 LGTGAYGTVYAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSV--SHPNLLRLLGCC 389
+G G YG V+ G ++ VA+K F RD S E +L ++V H N+L +
Sbjct: 16 VGKGRYGEVWRGSWQGEN-VAVKIFSSRDEKSW---FRETELYNTVMLRHENILGFIASD 71
Query: 390 I----EEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAM--- 442
+ + L+ + G+L +LQ + L +LH +
Sbjct: 72 MTSRHSSTQLWLITHYHEMGSLYDYLQL---TTLDTVSCLRIVLSIASGLAHLHIEIFGT 128
Query: 443 --NPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTA--PQ-GTPGYLDPQY 497
P I HRD+KS NIL+ N + +AD GL+ + ++ + P+ GT Y+ P+
Sbjct: 129 QGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEV 188
Query: 498 HQY------FHLSDKSDVYSFGVVLIEIITALK----VVDFSRPHSEV 535
F + D+++FG+VL E+ + V D+ P +V
Sbjct: 189 LDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDV 236
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 102/233 (43%), Gaps = 27/233 (11%)
Query: 309 SSVPFYPYKEIEKATSFFSEKHRLGTGAYGTVYAG------KLHNDDWVAIKRFRYRDTD 362
S+ Y E E A + LG G++G VY G K + VAIK +
Sbjct: 10 SAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVN--EAA 67
Query: 363 SIDQ---VMNEIKLLSSVSHPNLLRLLGCCIEEGEPILV-YEFMPNGTLCQHLQ--RERG 416
S+ + +NE ++ + +++RLLG + +G+P LV E M G L +L+ R
Sbjct: 68 SMRERIEFLNEASVMKEFNCHHVVRLLGV-VSQGQPTLVIMELMTRGDLKSYLRSLRPEM 126
Query: 417 SGLP------WXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFG 470
P YL++ HRD+ + N ++ ++ K+ DFG
Sbjct: 127 ENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFG 183
Query: 471 LSRLGMTESSHISTAPQGT--PGYLDPQYHQYFHLSDKSDVYSFGVVLIEIIT 521
++R + E+ + +G ++ P+ + + SDV+SFGVVL EI T
Sbjct: 184 MTR-DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 92/200 (46%), Gaps = 23/200 (11%)
Query: 332 LGTGAYGTV---YAGKLHNDDWVAIKRFR--YRDTDSIDQVMNEIKLLSSVSHPNLLRLL 386
+G+GA G V Y L D VAIK+ +++ + E+ L+ V+H N++ LL
Sbjct: 26 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 83
Query: 387 GC-----CIEEGEPI-LVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHS 440
+EE + + LV E M + LCQ +Q E L +LHS
Sbjct: 84 NVFTPQKTLEEFQDVYLVMELM-DANLCQVIQME----LDHERMSYLLYQMLCGIKHLHS 138
Query: 441 AMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQY 500
A I HRD+K SNI++ + K+ DFGL+R T S + T T Y P+
Sbjct: 139 A---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMMTPYVVTRYYRAPEVILG 193
Query: 501 FHLSDKSDVYSFGVVLIEII 520
+ D++S G ++ E++
Sbjct: 194 MGYKENVDIWSVGCIMGEMV 213
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 89/207 (42%), Gaps = 21/207 (10%)
Query: 332 LGTGAYGTVYAGK---LHNDD---WVAIKRFRY--RDTDSIDQVMNEIKLLSSVSHPNLL 383
LG GA+G VY G+ + ND VA+K + D +D +M E ++S ++H N++
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM-EALIISKLNHQNIV 97
Query: 384 RLLGCCIEEGEPILVYEFMPNGTLCQHLQRERG-----SGLPWXXXXXXXXXXXXXXXYL 438
R +G ++ ++ E M G L L+ R S L YL
Sbjct: 98 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 157
Query: 439 HSAMNPPIYHRDIKSSNILLD---YNYRSKVADFGLSRLGMTESSHISTAPQGTP-GYLD 494
HRDI + N LL +K+ DFG++R S + P ++
Sbjct: 158 EENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 214
Query: 495 PQYHQYFHLSDKSDVYSFGVVLIEIIT 521
P+ + K+D +SFGV+L EI +
Sbjct: 215 PEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 85/205 (41%), Gaps = 27/205 (13%)
Query: 326 FSEKHRLGTGAYGTV-----------YAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLL 374
F LGTG++G V YA K+ + V I+ +NE ++L
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVV-------KLKQIEHTLNEKRIL 95
Query: 375 SSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXX 434
+V+ P L++L + +V E++ G + HL+R P
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEP--HARFYAAQIVLT 153
Query: 435 XXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLD 494
YLHS + +RD+K N+L+D +V DFG ++ + + GTP YL
Sbjct: 154 FEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----GTPEYLA 206
Query: 495 PQYHQYFHLSDKSDVYSFGVVLIEI 519
P+ + D ++ GV++ E+
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 92/200 (46%), Gaps = 23/200 (11%)
Query: 332 LGTGAYGTV---YAGKLHNDDWVAIKRFR--YRDTDSIDQVMNEIKLLSSVSHPNLLRLL 386
+G+GA G V Y L D VAIK+ +++ + E+ L+ V+H N++ LL
Sbjct: 25 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 82
Query: 387 GC-----CIEEGEPI-LVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHS 440
+EE + + LV E M + LCQ +Q E L +LHS
Sbjct: 83 NVFTPQKTLEEFQDVYLVMELM-DANLCQVIQME----LDHERMSYLLYQMLCGIKHLHS 137
Query: 441 AMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQY 500
A I HRD+K SNI++ + K+ DFGL+R T S + T T Y P+
Sbjct: 138 A---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMMTPYVVTRYYRAPEVILG 192
Query: 501 FHLSDKSDVYSFGVVLIEII 520
+ D++S G ++ E++
Sbjct: 193 MGYKENVDIWSVGCIMGEMV 212
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 85/205 (41%), Gaps = 27/205 (13%)
Query: 326 FSEKHRLGTGAYGTV-----------YAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLL 374
F LGTG++G V YA K+ + V I+ +NE ++L
Sbjct: 64 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVV-------KLKQIEHTLNEKRIL 116
Query: 375 SSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXX 434
+V+ P L++L + +V E++ G + HL+R P
Sbjct: 117 QAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEP--HARFYAAQIVLT 174
Query: 435 XXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLD 494
YLHS + +RD+K N+L+D +V DFG ++ + + GTP YL
Sbjct: 175 FEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----GTPEYLA 227
Query: 495 PQYHQYFHLSDKSDVYSFGVVLIEI 519
P+ + D ++ GV++ E+
Sbjct: 228 PEIILSKGYNKAVDWWALGVLIYEM 252
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 89/207 (42%), Gaps = 21/207 (10%)
Query: 332 LGTGAYGTVYAGK---LHNDD---WVAIKRFRY--RDTDSIDQVMNEIKLLSSVSHPNLL 383
LG GA+G VY G+ + ND VA+K + D +D +M E ++S ++H N++
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM-EALIISKLNHQNIV 111
Query: 384 RLLGCCIEEGEPILVYEFMPNGTLCQHLQRERG-----SGLPWXXXXXXXXXXXXXXXYL 438
R +G ++ ++ E M G L L+ R S L YL
Sbjct: 112 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 171
Query: 439 HSAMNPPIYHRDIKSSNILLD---YNYRSKVADFGLSRLGMTESSHISTAPQGTP-GYLD 494
HRDI + N LL +K+ DFG++R S + P ++
Sbjct: 172 EENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 228
Query: 495 PQYHQYFHLSDKSDVYSFGVVLIEIIT 521
P+ + K+D +SFGV+L EI +
Sbjct: 229 PEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 93/214 (43%), Gaps = 23/214 (10%)
Query: 324 SFFSEKHRLGT----GAYGTVYAGK---LHNDDWVAIKRFRY---RDTDSIDQVMNEIKL 373
S S+++ LG G V+ + LH D VA+K R RD + E +
Sbjct: 8 SHLSDRYELGEILGFGGMSEVHLARDLRLHRD--VAVKVLRADLARDPSFYLRFRREAQN 65
Query: 374 LSSVSHPNLLRLLGCCIEEGE----PILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXX 429
++++HP ++ + E P +V E++ +G + + G P
Sbjct: 66 AAALNHPAIVAVYDTGEAETPAGPLPYIVMEYV-DGVTLRDIVHTEGPMTPKRAIEVIAD 124
Query: 430 XXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHIS--TAPQ 487
L+ + I HRD+K +NI++ KV DFG++R + ++ A
Sbjct: 125 ACQA----LNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVI 180
Query: 488 GTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIIT 521
GT YL P+ + + +SDVYS G VL E++T
Sbjct: 181 GTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLT 214
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 88/207 (42%), Gaps = 21/207 (10%)
Query: 332 LGTGAYGTVYAGK---LHNDD---WVAIKRFRY--RDTDSIDQVMNEIKLLSSVSHPNLL 383
LG GA+G VY G+ + ND VA+K + D +D +M E ++S +H N++
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM-EALIISKFNHQNIV 96
Query: 384 RLLGCCIEEGEPILVYEFMPNGTLCQHLQRERG-----SGLPWXXXXXXXXXXXXXXXYL 438
R +G ++ ++ E M G L L+ R S L YL
Sbjct: 97 RCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 156
Query: 439 HSAMNPPIYHRDIKSSNILLD---YNYRSKVADFGLSRLGMTESSHISTAPQGTP-GYLD 494
HRDI + N LL +K+ DFG++R S + P ++
Sbjct: 157 EENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 213
Query: 495 PQYHQYFHLSDKSDVYSFGVVLIEIIT 521
P+ + K+D +SFGV+L EI +
Sbjct: 214 PEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 104/235 (44%), Gaps = 19/235 (8%)
Query: 294 NQLSAKRLLCQAAGNSSVPFYPYKEIEKATSFFSEKH----RLGTGAYGTVYAGKLHNDD 349
+QL +R+ + + ++ P + + SFF + RLG G+YG V+ + D
Sbjct: 24 HQLQPRRVSFRGEASETLQ-SPGYDPSRPESFFQQSFQRLSRLGHGSYGEVFKVRSKEDG 82
Query: 350 WV-AIKRFR--YRDTDSIDQVMNEIKLLSSV-SHPNLLRLLGCCIEEGEPILVYEFMPNG 405
+ A+KR +R + + E+ V HP +RL EEG + + +
Sbjct: 83 RLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRL-EQAWEEGGILYLQTELCGP 141
Query: 406 TLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSK 465
+L QH + G+ LP +LHS + H D+K +NI L R K
Sbjct: 142 SLQQHCE-AWGASLPEAQVWGYLRDTLLALAHLHSQG---LVHLDVKPANIFLGPRGRCK 197
Query: 466 VADFG-LSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEI 519
+ DFG L LG + + +G P Y+ P+ Q + +DV+S G+ ++E+
Sbjct: 198 LGDFGLLVELGTAGAGEVQ---EGDPRYMAPELLQGSY-GTAADVFSLGLTILEV 248
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 92/200 (46%), Gaps = 23/200 (11%)
Query: 332 LGTGAYGTV---YAGKLHNDDWVAIKRFR--YRDTDSIDQVMNEIKLLSSVSHPNLLRLL 386
+G+GA G V Y L D VAIK+ +++ + E+ L+ V+H N++ LL
Sbjct: 26 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 83
Query: 387 GC-----CIEEGEPI-LVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHS 440
+EE + + LV E M + LCQ +Q E L +LHS
Sbjct: 84 NVFTPQKTLEEFQDVYLVMELM-DANLCQVIQME----LDHERMSYLLYQMLCGIKHLHS 138
Query: 441 AMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQY 500
A I HRD+K SNI++ + K+ DFGL+R T S + T T Y P+
Sbjct: 139 A---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMMTPYVVTRYYRAPEVILG 193
Query: 501 FHLSDKSDVYSFGVVLIEII 520
+ D++S G ++ E++
Sbjct: 194 MGYKENVDIWSVGCIMGEMV 213
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 85/205 (41%), Gaps = 27/205 (13%)
Query: 326 FSEKHRLGTGAYGTV-----------YAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLL 374
F LGTG++G V YA K+ + V I+ +NE ++L
Sbjct: 30 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVV-------KLKQIEHTLNEKRIL 82
Query: 375 SSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXX 434
+V+ P L++L + +V E++ G + HL+R P
Sbjct: 83 QAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP--HARFYAAQIVLT 140
Query: 435 XXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLD 494
YLHS + +RD+K N+L+D +V DFG ++ + + GTP YL
Sbjct: 141 FEYLHSL---DLIYRDLKPENLLIDEQGYIQVTDFGFAKRVKGRTWXLC----GTPEYLA 193
Query: 495 PQYHQYFHLSDKSDVYSFGVVLIEI 519
P+ + D ++ GV++ E+
Sbjct: 194 PEIILSKGYNKAVDWWALGVLIYEM 218
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 93/225 (41%), Gaps = 29/225 (12%)
Query: 318 EIEKATSFFSEKHRLGTGAYGTVYAG------KLHNDDWVAIKRF-RYRDTDSIDQVMNE 370
E E A + LG G++G VY G K + VAIK + +NE
Sbjct: 4 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 63
Query: 371 IKLLSSVSHPNLLRLLGCCIEEGEPILV-YEFMPNGTLCQHLQ--RERGSGLP------W 421
++ + +++RLLG + +G+P LV E M G L +L+ R P
Sbjct: 64 ASVMKEFNCHHVVRLLGV-VSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 122
Query: 422 XXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSH 481
YL++ HRD+ + N ++ ++ K+ DFG++R +
Sbjct: 123 SKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR----DIXE 175
Query: 482 ISTAPQGTPGYLDPQYHQYFHLSDK-----SDVYSFGVVLIEIIT 521
+G G L ++ L D SDV+SFGVVL EI T
Sbjct: 176 TDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 220
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 88/207 (42%), Gaps = 21/207 (10%)
Query: 332 LGTGAYGTVYAGK---LHNDD---WVAIKRFRY--RDTDSIDQVMNEIKLLSSVSHPNLL 383
LG GA+G VY G+ + ND VA+K + D +D +M E ++S +H N++
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM-EALIISKFNHQNIV 96
Query: 384 RLLGCCIEEGEPILVYEFMPNGTLCQHLQRERG-----SGLPWXXXXXXXXXXXXXXXYL 438
R +G ++ ++ E M G L L+ R S L YL
Sbjct: 97 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 156
Query: 439 HSAMNPPIYHRDIKSSNILLD---YNYRSKVADFGLSRLGMTESSHISTAPQGTP-GYLD 494
HRDI + N LL +K+ DFG++R S + P ++
Sbjct: 157 EENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 213
Query: 495 PQYHQYFHLSDKSDVYSFGVVLIEIIT 521
P+ + K+D +SFGV+L EI +
Sbjct: 214 PEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 82/197 (41%), Gaps = 13/197 (6%)
Query: 323 TSFFSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPN 381
+ FF + LG GA VY K A+K + I V EI +L +SHPN
Sbjct: 52 SDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKI--VRTEIGVLLRLSHPN 109
Query: 382 LLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSA 441
+++L E LV E + G L + E+G YLH
Sbjct: 110 IIKLKEIFETPTEISLVLELVTGGELFDRIV-EKGY-YSERDAADAVKQILEAVAYLHEN 167
Query: 442 MNPPIYHRDIKSSNILLDY---NYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYH 498
I HRD+K N+L + K+ADFGLS++ E + GTPGY P+
Sbjct: 168 ---GIVHRDLKPENLLYATPAPDAPLKIADFGLSKI--VEHQVLMKTVCGTPGYCAPEIL 222
Query: 499 QYFHLSDKSDVYSFGVV 515
+ + D++S G++
Sbjct: 223 RGCAYGPEVDMWSVGII 239
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 85/205 (41%), Gaps = 27/205 (13%)
Query: 326 FSEKHRLGTGAYGTV-----------YAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLL 374
F LGTG++G V YA K+ + V I+ +NE ++L
Sbjct: 38 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVV-------KLKQIEHTLNEKRIL 90
Query: 375 SSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXX 434
+V+ P L++L + +V E++ G + HL+R P
Sbjct: 91 QAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEP--HARFYAAQIVLT 148
Query: 435 XXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLD 494
YLHS + +RD+K N+L+D +V DFG ++ + + GTP YL
Sbjct: 149 FEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----GTPEYLA 201
Query: 495 PQYHQYFHLSDKSDVYSFGVVLIEI 519
P+ + D ++ GV++ E+
Sbjct: 202 PEIILSKGYNKAVDWWALGVLIYEM 226
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 99/224 (44%), Gaps = 27/224 (12%)
Query: 318 EIEKATSFFSEKHRLGTGAYGTVYAG------KLHNDDWVAIKRFRYRDTDSIDQ---VM 368
E E A + LG G++G VY G K + VAIK + S+ + +
Sbjct: 6 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVN--EAASMRERIEFL 63
Query: 369 NEIKLLSSVSHPNLLRLLGCCIEEGEPILV-YEFMPNGTLCQHLQ--RERGSGLP----- 420
NE ++ + +++RLLG + +G+P LV E M G L +L+ R P
Sbjct: 64 NEASVMKEFNCHHVVRLLGV-VSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPP 122
Query: 421 -WXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTES 479
YL++ HRD+ + N ++ ++ K+ DFG++R + E+
Sbjct: 123 SLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR-DIYET 178
Query: 480 SHISTAPQGT--PGYLDPQYHQYFHLSDKSDVYSFGVVLIEIIT 521
+ +G ++ P+ + + SDV+SFGVVL EI T
Sbjct: 179 DYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 85/200 (42%), Gaps = 30/200 (15%)
Query: 332 LGTGAYGTV-----------YAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHP 380
LG GA+ V YA K+ N K+ RD +++ E ++ + HP
Sbjct: 12 LGKGAFSVVRRCMKIPTGQEYAAKIIN-----TKKLSARDHQKLER---EARICRLLKHP 63
Query: 381 NLLRLLGCCIEEGEPILVYEFMPNGTLCQHL-QRERGSGLPWXXXXXXXXXXXXXXXYLH 439
N++RL EEG LV++ + G L + + RE S H
Sbjct: 64 NIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYS-----EADASHCIQQILESVNH 118
Query: 440 SAMNPPIYHRDIKSSNILLDYNYRS---KVADFGLSRLGMTESSHISTAPQGTPGYLDPQ 496
+N I HRD+K N+LL + K+ADFGL+ + + GTPGYL P+
Sbjct: 119 CHLN-GIVHRDLKPENLLLASKSKGAAVKLADFGLA-IEVQGDQQAWFGFAGTPGYLSPE 176
Query: 497 YHQYFHLSDKSDVYSFGVVL 516
+ D+++ GV+L
Sbjct: 177 VLRKDPYGKPVDMWACGVIL 196
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 88/207 (42%), Gaps = 21/207 (10%)
Query: 332 LGTGAYGTVYAGK---LHNDD---WVAIKRFRY--RDTDSIDQVMNEIKLLSSVSHPNLL 383
LG GA+G VY G+ + ND VA+K + D +D +M E ++S +H N++
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM-EALIISKFNHQNIV 88
Query: 384 RLLGCCIEEGEPILVYEFMPNGTLCQHLQRERG-----SGLPWXXXXXXXXXXXXXXXYL 438
R +G ++ ++ E M G L L+ R S L YL
Sbjct: 89 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 148
Query: 439 HSAMNPPIYHRDIKSSNILLD---YNYRSKVADFGLSRLGMTESSHISTAPQGTP-GYLD 494
HRDI + N LL +K+ DFG++R S + P ++
Sbjct: 149 EENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 205
Query: 495 PQYHQYFHLSDKSDVYSFGVVLIEIIT 521
P+ + K+D +SFGV+L EI +
Sbjct: 206 PEAFMEGIFTSKTDTWSFGVLLWEIFS 232
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 93/214 (43%), Gaps = 23/214 (10%)
Query: 324 SFFSEKHRLGT----GAYGTVYAGK---LHNDDWVAIKRFRY---RDTDSIDQVMNEIKL 373
S S+++ LG G V+ + LH D VA+K R RD + E +
Sbjct: 25 SHLSDRYELGEILGFGGMSEVHLARDLRLHRD--VAVKVLRADLARDPSFYLRFRREAQN 82
Query: 374 LSSVSHPNLLRLLGCCIEEGE----PILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXX 429
++++HP ++ + E P +V E++ +G + + G P
Sbjct: 83 AAALNHPAIVAVYDTGEAETPAGPLPYIVMEYV-DGVTLRDIVHTEGPMTPKRAIEVIAD 141
Query: 430 XXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHIS--TAPQ 487
L+ + I HRD+K +NI++ KV DFG++R + ++ A
Sbjct: 142 ACQA----LNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVI 197
Query: 488 GTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIIT 521
GT YL P+ + + +SDVYS G VL E++T
Sbjct: 198 GTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLT 231
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 97/212 (45%), Gaps = 22/212 (10%)
Query: 332 LGTGAYGTVYA----GKLHNDDW--VAIKRFR-YRDTDSIDQVMNEIKLLSSV-SHPNLL 383
LG GA+G V G + +D VA+K + + +M+E+K+LS + +H N++
Sbjct: 49 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 108
Query: 384 RLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGL-----PWXXXXXXXXXXXXXXXYL 438
LLG C G +++ E+ G L L+R+R S + P
Sbjct: 109 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 168
Query: 439 HSAMNPPI--------YHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTP 490
+ + HRD+ + NILL + +K+ DFGL+R +S+++ P
Sbjct: 169 SYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLP 228
Query: 491 -GYLDPQYHQYFHLSDKSDVYSFGVVLIEIIT 521
++ P+ + +SDV+S+G+ L E+ +
Sbjct: 229 VKWMAPESIFNCVYTFESDVWSYGIFLWELFS 260
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 446 IYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHIS--TAPQGTPGYLDPQYHQYFHL 503
I HRD+K +NI++ KV DFG++R + ++ A GT YL P+ + +
Sbjct: 137 IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSV 196
Query: 504 SDKSDVYSFGVVLIEIIT 521
+SDVYS G VL E++T
Sbjct: 197 DARSDVYSLGCVLYEVLT 214
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 89/217 (41%), Gaps = 38/217 (17%)
Query: 320 EKATSFFSEKHRLGTGAYGTV-----------YAGKLHNDDWVAIKRFRYRDTD---SID 365
E ++ LG+G + V YA K IK+ R + + S +
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKF-------IKKRRTKSSRRGVSRE 59
Query: 366 QVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXX 425
+ E+ +L + HPN++ L + + IL+ E + G L L + L
Sbjct: 60 DIEREVSILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEK--ESLTEEEAT 117
Query: 426 XXXXXXXXXXXYLHSAMNPPIYHRDIKSSNI-LLDYNY---RSKVADFGLSR---LGMTE 478
YLHS I H D+K NI LLD N R K+ DFGL+ G E
Sbjct: 118 EFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG-NE 173
Query: 479 SSHISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVV 515
+I GTP ++ P+ Y L ++D++S GV+
Sbjct: 174 FKNIF----GTPEFVAPEIVNYEPLGLEADMWSIGVI 206
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 97/212 (45%), Gaps = 22/212 (10%)
Query: 332 LGTGAYGTVYA----GKLHNDDW--VAIKRFR-YRDTDSIDQVMNEIKLLSSV-SHPNLL 383
LG GA+G V G + +D VA+K + + +M+E+K+LS + +H N++
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 113
Query: 384 RLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGL-----PWXXXXXXXXXXXXXXXYL 438
LLG C G +++ E+ G L L+R+R S + P
Sbjct: 114 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 173
Query: 439 HSAMNPPI--------YHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTP 490
+ + HRD+ + NILL + +K+ DFGL+R +S+++ P
Sbjct: 174 SYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVKGNARLP 233
Query: 491 -GYLDPQYHQYFHLSDKSDVYSFGVVLIEIIT 521
++ P+ + +SDV+S+G+ L E+ +
Sbjct: 234 VKWMAPESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 85/205 (41%), Gaps = 27/205 (13%)
Query: 326 FSEKHRLGTGAYGTV-----------YAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLL 374
F LGTG++G V YA K+ + V I+ +NE ++L
Sbjct: 64 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVV-------KLKQIEHTLNEKRIL 116
Query: 375 SSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXX 434
+V+ P L++L + +V E++ G + HL+R P
Sbjct: 117 QAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP--HARFYAAQIVLT 174
Query: 435 XXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLD 494
YLHS + +RD+K N+L+D +V DFG ++ + + GTP YL
Sbjct: 175 FEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGATWTLC----GTPEYLA 227
Query: 495 PQYHQYFHLSDKSDVYSFGVVLIEI 519
P+ + D ++ GV++ E+
Sbjct: 228 PEIILSKGYNKAVDWWALGVLIYEM 252
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 446 IYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHIS--TAPQGTPGYLDPQYHQYFHL 503
I HRD+K +NI++ KV DFG++R + ++ A GT YL P+ + +
Sbjct: 137 IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSV 196
Query: 504 SDKSDVYSFGVVLIEIIT 521
+SDVYS G VL E++T
Sbjct: 197 DARSDVYSLGCVLYEVLT 214
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 97/212 (45%), Gaps = 22/212 (10%)
Query: 332 LGTGAYGTVYA----GKLHNDDW--VAIKRFR-YRDTDSIDQVMNEIKLLSSV-SHPNLL 383
LG GA+G V G + +D VA+K + + +M+E+K+LS + +H N++
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 113
Query: 384 RLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGL-----PWXXXXXXXXXXXXXXXYL 438
LLG C G +++ E+ G L L+R+R S + P
Sbjct: 114 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 173
Query: 439 HSAMNPPI--------YHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTP 490
+ + HRD+ + NILL + +K+ DFGL+R +S+++ P
Sbjct: 174 SYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLP 233
Query: 491 -GYLDPQYHQYFHLSDKSDVYSFGVVLIEIIT 521
++ P+ + +SDV+S+G+ L E+ +
Sbjct: 234 VKWMAPESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 88/207 (42%), Gaps = 21/207 (10%)
Query: 332 LGTGAYGTVYAGK---LHNDD---WVAIKRFRY--RDTDSIDQVMNEIKLLSSVSHPNLL 383
LG GA+G VY G+ + ND VA+K + D +D +M E ++S +H N++
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM-EALIISKFNHQNIV 111
Query: 384 RLLGCCIEEGEPILVYEFMPNGTLCQHLQRERG-----SGLPWXXXXXXXXXXXXXXXYL 438
R +G ++ ++ E M G L L+ R S L YL
Sbjct: 112 RCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 171
Query: 439 HSAMNPPIYHRDIKSSNILLD---YNYRSKVADFGLSRLGMTESSHISTAPQGTP-GYLD 494
HRDI + N LL +K+ DFG++R S + P ++
Sbjct: 172 EENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 228
Query: 495 PQYHQYFHLSDKSDVYSFGVVLIEIIT 521
P+ + K+D +SFGV+L EI +
Sbjct: 229 PEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 95/197 (48%), Gaps = 12/197 (6%)
Query: 331 RLGTGAYGTVYAGK-LHNDDWVAIKRFRYR-DTDSIDQVMNEIKL-LSSVSHPNLLRLLG 387
LG GAYG V + + + A+KR R ++ +++ ++ + +V P + G
Sbjct: 41 ELGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQEQKRLLXDLDISXRTVDCPFTVTFYG 100
Query: 388 CCIEEGEPILVYEFMPNGTLCQHLQR--ERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPP 445
EG+ + E + + +L + ++ ++G +P +LHS ++
Sbjct: 101 ALFREGDVWICXE-LXDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS-- 157
Query: 446 IYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTA---PQGTPGYLDPQYHQYFH 502
+ HRD+K SN+L++ + K DFG+S + + + A P P ++P+ +Q +
Sbjct: 158 VIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDIDAGCKPYXAPERINPELNQKGY 217
Query: 503 LSDKSDVYSFGVVLIEI 519
S KSD++S G+ IE+
Sbjct: 218 -SVKSDIWSLGITXIEL 233
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 88/207 (42%), Gaps = 21/207 (10%)
Query: 332 LGTGAYGTVYAGK---LHNDD---WVAIKRFRY--RDTDSIDQVMNEIKLLSSVSHPNLL 383
LG GA+G VY G+ + ND VA+K + D +D +M E ++S +H N++
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM-EALIISKFNHQNIV 97
Query: 384 RLLGCCIEEGEPILVYEFMPNGTLCQHLQRERG-----SGLPWXXXXXXXXXXXXXXXYL 438
R +G ++ ++ E M G L L+ R S L YL
Sbjct: 98 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 157
Query: 439 HSAMNPPIYHRDIKSSNILLD---YNYRSKVADFGLSRLGMTESSHISTAPQGTP-GYLD 494
HRDI + N LL +K+ DFG++R S + P ++
Sbjct: 158 EENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 214
Query: 495 PQYHQYFHLSDKSDVYSFGVVLIEIIT 521
P+ + K+D +SFGV+L EI +
Sbjct: 215 PEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 85/205 (41%), Gaps = 27/205 (13%)
Query: 326 FSEKHRLGTGAYGTV-----------YAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLL 374
F LGTG++G V YA K+ + V I+ +NE ++L
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVV-------KLKQIEHTLNEKRIL 95
Query: 375 SSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXX 434
+V+ P L++L + +V E++ G + HL+R P
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP--HARFYAAQIVLT 153
Query: 435 XXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLD 494
YLHS + +RD+K N+++D +V DFG ++ + + GTP YL
Sbjct: 154 FEYLHSL---DLIYRDLKPENLIIDQQGYIQVTDFGFAKRVKGRTWXLC----GTPEYLA 206
Query: 495 PQYHQYFHLSDKSDVYSFGVVLIEI 519
P+ + D ++ GV++ E+
Sbjct: 207 PEIIISKGYNKAVDWWALGVLIYEM 231
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 88/207 (42%), Gaps = 21/207 (10%)
Query: 332 LGTGAYGTVYAGK---LHNDD---WVAIKRFRY--RDTDSIDQVMNEIKLLSSVSHPNLL 383
LG GA+G VY G+ + ND VA+K + D +D +M E ++S +H N++
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM-EALIISKFNHQNIV 113
Query: 384 RLLGCCIEEGEPILVYEFMPNGTLCQHLQRERG-----SGLPWXXXXXXXXXXXXXXXYL 438
R +G ++ ++ E M G L L+ R S L YL
Sbjct: 114 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 173
Query: 439 HSAMNPPIYHRDIKSSNILLD---YNYRSKVADFGLSRLGMTESSHISTAPQGTP-GYLD 494
HRDI + N LL +K+ DFG++R S + P ++
Sbjct: 174 EENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 230
Query: 495 PQYHQYFHLSDKSDVYSFGVVLIEIIT 521
P+ + K+D +SFGV+L EI +
Sbjct: 231 PEAFMEGIFTSKTDTWSFGVLLWEIFS 257
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 90/199 (45%), Gaps = 21/199 (10%)
Query: 332 LGTGAYGTV---YAGKLHNDDWVAIKRFR--YRDTDSIDQVMNEIKLLSSVSHPNLLRLL 386
+G+GA G V Y L + VAIK+ +++ + E+ L+ V+H N++ LL
Sbjct: 37 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 94
Query: 387 GC-----CIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSA 441
+EE + + + + + LCQ +Q E L +LHSA
Sbjct: 95 NVFTPQKSLEEFQDVYIVMELMDANLCQVIQME----LDHERMSYLLYQMLCGIKHLHSA 150
Query: 442 MNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYF 501
I HRD+K SNI++ + K+ DFGL+R T S + T T Y P+
Sbjct: 151 ---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMMTPYVVTRYYRAPEVILGM 205
Query: 502 HLSDKSDVYSFGVVLIEII 520
+ D++S G ++ E++
Sbjct: 206 GYKENVDLWSVGCIMGEMV 224
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 84/205 (40%), Gaps = 27/205 (13%)
Query: 326 FSEKHRLGTGAYGTV-----------YAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLL 374
F LGTG++G V YA K+ + V I+ +NE ++L
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVV-------KLKQIEHTLNEKRIL 95
Query: 375 SSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXX 434
+V+ P L++L + +V E++ G + HL+R P
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP--HARFYAAQIVLT 153
Query: 435 XXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLD 494
YLHS + +RD+K N+L+D +V DFG ++ + + GTP YL
Sbjct: 154 FEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----GTPEYLA 206
Query: 495 PQYHQYFHLSDKSDVYSFGVVLIEI 519
P + D ++ GV++ E+
Sbjct: 207 PAIILSKGYNKAVDWWALGVLIYEM 231
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 87/197 (44%), Gaps = 10/197 (5%)
Query: 332 LGTGAYGTV-YAGKLHNDDWVAIKRFRYR---DTDSIDQVMNEIKLLSSVSHPNLLRLLG 387
LG G++ TV A +L AIK R + + V E ++S + HP ++L
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 99
Query: 388 CCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIY 447
++ + + NG L +++ R+ GS YLH I
Sbjct: 100 TFQDDEKLYFGLSYAKNGCLLKYI-RKIGS-FDETCTRFYTAEIVSALEYLHGK---GII 154
Query: 448 HRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHI-STAPQGTPGYLDPQYHQYFHLSDK 506
HRD+K NILL+ + ++ DFG +++ ES + + GT Y+ P+ S
Sbjct: 155 HRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSASKS 214
Query: 507 SDVYSFGVVLIEIITAL 523
SD+++ G ++ +++ L
Sbjct: 215 SDLWALGCIIYQLVAGL 231
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 88/207 (42%), Gaps = 21/207 (10%)
Query: 332 LGTGAYGTVYAGK---LHNDD---WVAIKRFRY--RDTDSIDQVMNEIKLLSSVSHPNLL 383
LG GA+G VY G+ + ND VA+K + D +D +M E ++S +H N++
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM-EALIISKFNHQNIV 103
Query: 384 RLLGCCIEEGEPILVYEFMPNGTLCQHLQRERG-----SGLPWXXXXXXXXXXXXXXXYL 438
R +G ++ ++ E M G L L+ R S L YL
Sbjct: 104 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 163
Query: 439 HSAMNPPIYHRDIKSSNILLD---YNYRSKVADFGLSRLGMTESSHISTAPQGTP-GYLD 494
HRDI + N LL +K+ DFG++R S + P ++
Sbjct: 164 EENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 220
Query: 495 PQYHQYFHLSDKSDVYSFGVVLIEIIT 521
P+ + K+D +SFGV+L EI +
Sbjct: 221 PEAFMEGIFTSKTDTWSFGVLLWEIFS 247
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 65/145 (44%), Gaps = 7/145 (4%)
Query: 331 RLGTGAYGTVYAGKLHNDDWVAIKRFRYRDTDS--IDQVMNEIKLLSSVSHPNLLRLLGC 388
++G G YG VY + + + A+K+ R D + EI +L + H N+++L
Sbjct: 9 KIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 389 CIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYH 448
+ +LV+E + + L + L G GL Y H + H
Sbjct: 69 IHTKKRLVLVFEHL-DQDLKKLLDVCEG-GLESVTAKSFLLQLLNGIAYCHDRR---VLH 123
Query: 449 RDIKSSNILLDYNYRSKVADFGLSR 473
RD+K N+L++ K+ADFGL+R
Sbjct: 124 RDLKPQNLLINREGELKIADFGLAR 148
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 65/145 (44%), Gaps = 7/145 (4%)
Query: 331 RLGTGAYGTVYAGKLHNDDWVAIKRFRYRDTDS--IDQVMNEIKLLSSVSHPNLLRLLGC 388
++G G YG VY + + + A+K+ R D + EI +L + H N+++L
Sbjct: 9 KIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 389 CIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYH 448
+ +LV+E + + L + L G GL Y H + H
Sbjct: 69 IHTKKRLVLVFEHL-DQDLKKLLDVCEG-GLESVTAKSFLLQLLNGIAYCHDRR---VLH 123
Query: 449 RDIKSSNILLDYNYRSKVADFGLSR 473
RD+K N+L++ K+ADFGL+R
Sbjct: 124 RDLKPQNLLINREGELKIADFGLAR 148
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 65/145 (44%), Gaps = 7/145 (4%)
Query: 331 RLGTGAYGTVYAGKLHNDDWVAIKRFRYRDTDS--IDQVMNEIKLLSSVSHPNLLRLLGC 388
++G G YG VY + + + A+K+ R D + EI +L + H N+++L
Sbjct: 9 KIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 389 CIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYH 448
+ +LV+E + + L + L G GL Y H + H
Sbjct: 69 IHTKKRLVLVFEHL-DQDLKKLLDVCEG-GLESVTAKSFLLQLLNGIAYCHDRR---VLH 123
Query: 449 RDIKSSNILLDYNYRSKVADFGLSR 473
RD+K N+L++ K+ADFGL+R
Sbjct: 124 RDLKPQNLLINREGELKIADFGLAR 148
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 90/205 (43%), Gaps = 24/205 (11%)
Query: 326 FSEKHRL----GTGAYGTV------YAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLS 375
F+E+++L G GA+ V AG+ + + K+ RD +++ E ++
Sbjct: 9 FTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLER---EARICR 65
Query: 376 SVSHPNLLRLLGCCIEEGEPILVYEFMPNGTLCQHL-QRERGSGLPWXXXXXXXXXXXXX 434
+ HPN++RL EEG L+++ + G L + + RE S
Sbjct: 66 LLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYS-----EADASHCIQQIL 120
Query: 435 XXYLHSAMNPPIYHRDIKSSNILLDYNYRS---KVADFGLSRLGMTESSHISTAPQGTPG 491
LH + HR++K N+LL + K+ADFGL+ + + GTPG
Sbjct: 121 EAVLH-CHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLA-IEVEGEQQAWFGFAGTPG 178
Query: 492 YLDPQYHQYFHLSDKSDVYSFGVVL 516
YL P+ + D+++ GV+L
Sbjct: 179 YLSPEVLRKDPYGKPVDLWACGVIL 203
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 85/205 (41%), Gaps = 27/205 (13%)
Query: 326 FSEKHRLGTGAYGTV-----------YAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLL 374
F LGTG++G V YA K+ + V I+ +NE ++L
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVV-------KLKQIEHTLNEKRIL 95
Query: 375 SSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXX 434
+V+ P L++L + +V E++ G + HL+R P
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP--HARFYAAQIVLT 153
Query: 435 XXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLD 494
YLHS + +RD+K N+L+D +V DFG ++ + + GTP YL
Sbjct: 154 FEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----GTPEYLA 206
Query: 495 PQYHQYFHLSDKSDVYSFGVVLIEI 519
P+ + D ++ GV++ ++
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYQM 231
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 90/205 (43%), Gaps = 33/205 (16%)
Query: 332 LGTGAYGTV---YAGKLHNDDWVAIKRFR--YRDTDSIDQVMNEIKLLSSVSHPNLLRLL 386
+G+GAYG+V Y +L VA+K+ ++ + E++LL + H N++ LL
Sbjct: 36 VGSGAYGSVCSAYDARLRQK--VAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 93
Query: 387 -----GCCIEE-GEPILVYEFM----PNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXX 436
IE+ E LV M N CQ L E L +
Sbjct: 94 DVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLK-------- 145
Query: 437 YLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQ 496
Y+HSA I HRD+K SN+ ++ + ++ DFGL+R E T T Y P+
Sbjct: 146 YIHSA---GIIHRDLKPSNVAVNEDSELRILDFGLARQADEE----MTGYVATRWYRAPE 198
Query: 497 YH-QYFHLSDKSDVYSFGVVLIEII 520
+ H + D++S G ++ E++
Sbjct: 199 IMLNWMHYNQTVDIWSVGCIMAELL 223
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 99/233 (42%), Gaps = 43/233 (18%)
Query: 321 KATSFFSEKHRLGTGAYGTVYAGKLHNDD-WVAIKRFRYRDTDSIDQVMNEIKLLSSVSH 379
+ S F E LG GA+G V + D + AIK+ R+ + + + +++E+ LL+S++H
Sbjct: 3 RYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTE-EKLSTILSEVXLLASLNH 61
Query: 380 PNLLRLLGCCIEEGEPI-------------LVYEFMPNGTL-----CQHLQRERGSGLPW 421
++R +E + + E+ N TL ++L ++R W
Sbjct: 62 QYVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEY--W 119
Query: 422 XXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSR-------- 473
Y+HS I HR++K NI +D + K+ DFGL++
Sbjct: 120 RLFRQILEALS----YIHSQ---GIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDI 172
Query: 474 -----LGMTESSHISTAPQGTPGYLDPQYHQ-YFHLSDKSDVYSFGVVLIEII 520
+ SS T+ GT Y+ + H ++K D YS G++ E I
Sbjct: 173 LKLDSQNLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 89/199 (44%), Gaps = 21/199 (10%)
Query: 332 LGTGAYGTV---YAGKLHNDDWVAIKRFR--YRDTDSIDQVMNEIKLLSSVSHPNLLRLL 386
+G+GA G V Y L + VAIK+ +++ + E+ L+ V+H N++ LL
Sbjct: 34 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 91
Query: 387 GC-----CIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSA 441
+EE + + + + + LCQ +Q E L +LHSA
Sbjct: 92 NVFTPQKSLEEFQDVYIVMELMDANLCQVIQME----LDHERMSYLLYQMLCGIKHLHSA 147
Query: 442 MNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYF 501
I HRD+K SNI++ + K+ DFGL+R T S + T Y P+
Sbjct: 148 ---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMMVPFVVTRYYRAPEVILGM 202
Query: 502 HLSDKSDVYSFGVVLIEII 520
+ D++S G ++ E+I
Sbjct: 203 GYKENVDIWSVGCIMGEMI 221
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 89/199 (44%), Gaps = 21/199 (10%)
Query: 332 LGTGAYGTV---YAGKLHNDDWVAIKRFR--YRDTDSIDQVMNEIKLLSSVSHPNLLRLL 386
+G+GA G V Y L + VAIK+ +++ + E+ L+ V+H N++ LL
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 387 GC-----CIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSA 441
+EE + + + + + LCQ +Q E L +LHSA
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDANLCQVIQME----LDHERMSYLLYQMLCGIKHLHSA 145
Query: 442 MNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYF 501
I HRD+K SNI++ + K+ DFGL+R T S + T Y P+
Sbjct: 146 ---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMMEPEVVTRYYRAPEVILGM 200
Query: 502 HLSDKSDVYSFGVVLIEII 520
+ D++S G ++ E++
Sbjct: 201 GYKENVDIWSVGCIMGEMV 219
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 90/199 (45%), Gaps = 21/199 (10%)
Query: 332 LGTGAYGTV---YAGKLHNDDWVAIKRFR--YRDTDSIDQVMNEIKLLSSVSHPNLLRLL 386
+G+GA G V Y L + VAIK+ +++ + E+ L+ V+H N++ LL
Sbjct: 26 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 83
Query: 387 GC-----CIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSA 441
+EE + + + + + LCQ +Q E L +LHSA
Sbjct: 84 NVFTPQKSLEEFQDVYIVMELMDANLCQVIQME----LDHERMSYLLYQMLCGIKHLHSA 139
Query: 442 MNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYF 501
I HRD+K SNI++ + K+ DFGL+R T S + T T Y P+
Sbjct: 140 ---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMMTPYVVTRYYRAPEVILGM 194
Query: 502 HLSDKSDVYSFGVVLIEII 520
+ D++S G ++ E++
Sbjct: 195 GYKENVDLWSVGCIMGEMV 213
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 86/197 (43%), Gaps = 10/197 (5%)
Query: 332 LGTGAYGTV-YAGKLHNDDWVAIKRFRYR---DTDSIDQVMNEIKLLSSVSHPNLLRLLG 387
LG G++ TV A +L AIK R + + V E ++S + HP ++L
Sbjct: 38 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 97
Query: 388 CCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIY 447
++ + + NG L +++ R+ GS YLH I
Sbjct: 98 TFQDDEKLYFGLSYAKNGELLKYI-RKIGS-FDETCTRFYTAEIVSALEYLHGK---GII 152
Query: 448 HRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHI-STAPQGTPGYLDPQYHQYFHLSDK 506
HRD+K NILL+ + ++ DFG +++ ES + A GT Y+ P+
Sbjct: 153 HRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLTEKSACKS 212
Query: 507 SDVYSFGVVLIEIITAL 523
SD+++ G ++ +++ L
Sbjct: 213 SDLWALGCIIYQLVAGL 229
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 106/244 (43%), Gaps = 33/244 (13%)
Query: 296 LSAKRLLCQAAGNSSVPFYPYKEIEKATSFFSEKHR----LGTGAYGTVYAG-KLHNDDW 350
L + L Q+ + P + +E+ K E+++ +G+GAYG+V A
Sbjct: 13 LGTENLYFQSNASQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLR 72
Query: 351 VAIKRFR--YRDTDSIDQVMNEIKLLSSVSHPNLLRLLGC-----CIEEGEPI-LVYEFM 402
VA+K+ ++ + E++LL + H N++ LL +EE + LV M
Sbjct: 73 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM 132
Query: 403 ----PNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILL 458
N CQ L + L + Y+HSA I HRD+K SN+ +
Sbjct: 133 GADLNNIVKCQKLTDDHVQFLIYQILRGLK--------YIHSA---DIIHRDLKPSNLAV 181
Query: 459 DYNYRSKVADFGLSRLGMTE-SSHISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLI 517
+ + K+ DFGL+R E +++T P + + H + D++S G ++
Sbjct: 182 NEDCELKILDFGLARHTDDEMXGYVATRWYRAPEIM----LNWMHYNQTVDIWSVGCIMA 237
Query: 518 EIIT 521
E++T
Sbjct: 238 ELLT 241
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 88/207 (42%), Gaps = 21/207 (10%)
Query: 332 LGTGAYGTVYAGK---LHNDD---WVAIKRFRY--RDTDSIDQVMNEIKLLSSVSHPNLL 383
LG GA+G VY G+ + ND VA+K + D +D +M E ++S +H N++
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM-EALIISKFNHQNIV 123
Query: 384 RLLGCCIEEGEPILVYEFMPNGTLCQHLQRERG-----SGLPWXXXXXXXXXXXXXXXYL 438
R +G ++ ++ E M G L L+ R S L YL
Sbjct: 124 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 183
Query: 439 HSAMNPPIYHRDIKSSNILLD---YNYRSKVADFGLSRLGMTESSHISTAPQGTP-GYLD 494
HRDI + N LL +K+ DFG++R S + P ++
Sbjct: 184 EENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 240
Query: 495 PQYHQYFHLSDKSDVYSFGVVLIEIIT 521
P+ + K+D +SFGV+L EI +
Sbjct: 241 PEAFMEGIFTSKTDTWSFGVLLWEIFS 267
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 88/210 (41%), Gaps = 27/210 (12%)
Query: 332 LGTGAYGTVYAGK---LHNDD---WVAIKRFRY--RDTDSIDQVMNEIKLLSSVSHPNLL 383
LG GA+G VY G+ + ND VA+K + D +D +M E ++S +H N++
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM-EALIISKFNHQNIV 114
Query: 384 RLLGCCIEEGEPILVYEFMPNGTLCQHLQRERG-----SGLPWXXXXXXXXXXXXXXXYL 438
R +G ++ ++ E M G L L+ R S L YL
Sbjct: 115 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 174
Query: 439 HSAMNPPIYHRDIKSSNILLD---YNYRSKVADFGLSR----LGMTESSHISTAPQGTPG 491
HRDI + N LL +K+ DFG++R G + P
Sbjct: 175 EENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVK--- 228
Query: 492 YLDPQYHQYFHLSDKSDVYSFGVVLIEIIT 521
++ P+ + K+D +SFGV+L EI +
Sbjct: 229 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 258
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 90/205 (43%), Gaps = 33/205 (16%)
Query: 332 LGTGAYGTV---YAGKLHNDDWVAIKRFR--YRDTDSIDQVMNEIKLLSSVSHPNLLRLL 386
+G+GAYG+V Y +L VA+K+ ++ + E++LL + H N++ LL
Sbjct: 28 VGSGAYGSVCSAYDARLRQK--VAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 85
Query: 387 -----GCCIEE-GEPILVYEFM----PNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXX 436
IE+ E LV M N CQ L E L +
Sbjct: 86 DVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLK-------- 137
Query: 437 YLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQ 496
Y+HSA I HRD+K SN+ ++ + ++ DFGL+R E T T Y P+
Sbjct: 138 YIHSA---GIIHRDLKPSNVAVNEDCELRILDFGLARQADEE----MTGYVATRWYRAPE 190
Query: 497 YH-QYFHLSDKSDVYSFGVVLIEII 520
+ H + D++S G ++ E++
Sbjct: 191 IMLNWMHYNQTVDIWSVGCIMAELL 215
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 84/196 (42%), Gaps = 11/196 (5%)
Query: 332 LGTGAYGTV-YAGKLHNDDWVAIKRFRY-RDTDSIDQVMNEIKLLSSVSHPNLLRLLGCC 389
LG GA G V A ++ VA+K R D + + EI + ++H N+++ G
Sbjct: 14 LGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 390 IEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHR 449
E L E+ G L + E G+P YLH I HR
Sbjct: 74 REGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDAQRFFHQLMAGVVYLHGIG---ITHR 128
Query: 450 DIKSSNILLDYNYRSKVADFGLSRL-GMTESSHISTAPQGTPGYLDPQY--HQYFHLSDK 506
DIK N+LLD K++DFGL+ + + GT Y+ P+ + FH ++
Sbjct: 129 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH-AEP 187
Query: 507 SDVYSFGVVLIEIITA 522
DV+S G+VL ++
Sbjct: 188 VDVWSCGIVLTAMLAG 203
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 88/210 (41%), Gaps = 27/210 (12%)
Query: 332 LGTGAYGTVYAGK---LHNDD---WVAIKRFRY--RDTDSIDQVMNEIKLLSSVSHPNLL 383
LG GA+G VY G+ + ND VA+K + D +D +M E ++S +H N++
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM-EALIISKFNHQNIV 137
Query: 384 RLLGCCIEEGEPILVYEFMPNGTLCQHLQRERG-----SGLPWXXXXXXXXXXXXXXXYL 438
R +G ++ ++ E M G L L+ R S L YL
Sbjct: 138 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 197
Query: 439 HSAMNPPIYHRDIKSSNILLD---YNYRSKVADFGLSR----LGMTESSHISTAPQGTPG 491
HRDI + N LL +K+ DFG++R G + P
Sbjct: 198 EENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVK--- 251
Query: 492 YLDPQYHQYFHLSDKSDVYSFGVVLIEIIT 521
++ P+ + K+D +SFGV+L EI +
Sbjct: 252 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 281
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 99/228 (43%), Gaps = 27/228 (11%)
Query: 314 YPYKEIEKATSFFSEKHRLGTGAYGTVYAG------KLHNDDWVAIKRFRYRDTDSIDQ- 366
Y E E A + LG G++G VY G K + VAIK + S+ +
Sbjct: 2 YVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVN--EAASMRER 59
Query: 367 --VMNEIKLLSSVSHPNLLRLLGCCIEEGEPILV-YEFMPNGTLCQHLQ--RERGSGLP- 420
+NE ++ + +++RLLG + +G+P LV E M G L +L+ R P
Sbjct: 60 IEFLNEASVMKEFNCHHVVRLLGV-VSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPV 118
Query: 421 -----WXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLG 475
YL++ HRD+ + N + ++ K+ DFG++R
Sbjct: 119 LAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCXVAEDFTVKIGDFGMTR-D 174
Query: 476 MTESSHISTAPQGT--PGYLDPQYHQYFHLSDKSDVYSFGVVLIEIIT 521
+ E+ + +G ++ P+ + + SDV+SFGVVL EI T
Sbjct: 175 IYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 69/149 (46%), Gaps = 13/149 (8%)
Query: 331 RLGTGAYGTVYAG-KLHNDDWVAIKRF--RYRDTDSIDQVMNEIKLLSSVS-HPNLLRLL 386
+LG GAYG V+ + VA+K+ ++++ + EI +L+ +S H N++ LL
Sbjct: 16 KLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLL 75
Query: 387 GCCIEEGEP--ILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNP 444
+ + LV+++M R + L YLHS
Sbjct: 76 NVLRADNDRDVYLVFDYMETDLHAVI----RANILEPVHKQYVVYQLIKVIKYLHSG--- 128
Query: 445 PIYHRDIKSSNILLDYNYRSKVADFGLSR 473
+ HRD+K SNILL+ KVADFGLSR
Sbjct: 129 GLLHRDMKPSNILLNAECHVKVADFGLSR 157
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 92/200 (46%), Gaps = 23/200 (11%)
Query: 332 LGTGAYGTV---YAGKLHNDDWVAIKRFR--YRDTDSIDQVMNEIKLLSSVSHPNLLRLL 386
+G+GA G V Y L D VAIK+ +++ + E+ L+ V+H N++ LL
Sbjct: 32 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLL 89
Query: 387 GC-----CIEEGEPI-LVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHS 440
+EE + + LV E M + L Q +Q E L +LHS
Sbjct: 90 NVFTPQKTLEEFQDVYLVMELM-DANLXQVIQME----LDHERMSYLLYQMLXGIKHLHS 144
Query: 441 AMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQY 500
A I HRD+K SNI++ + K+ DFGL+R T S + T T Y P+
Sbjct: 145 A---GIIHRDLKPSNIVVKSDXTLKILDFGLARTAGT--SFMMTPYVVTRYYRAPEVILG 199
Query: 501 FHLSDKSDVYSFGVVLIEII 520
+ D++S G ++ E++
Sbjct: 200 MGYKENVDIWSVGCIMGEMV 219
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 89/199 (44%), Gaps = 21/199 (10%)
Query: 332 LGTGAYGTV---YAGKLHNDDWVAIKRFR--YRDTDSIDQVMNEIKLLSSVSHPNLLRLL 386
+G+GA G V Y L + VAIK+ +++ + E+ L+ V+H N++ LL
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLL 89
Query: 387 GC-----CIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSA 441
+EE + + + + + L Q +Q E L +LHSA
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDANLSQVIQME----LDHERMSYLLYQMLVGIKHLHSA 145
Query: 442 MNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYF 501
I HRD+K SNI++ + K+ DFGL+R T S + T T Y P+
Sbjct: 146 ---GIIHRDLKPSNIVVKSDATLKILDFGLARTAGT--SFMMTPYVVTRYYRAPEVILGM 200
Query: 502 HLSDKSDVYSFGVVLIEII 520
+ D++S G ++ E+I
Sbjct: 201 GYKENVDIWSVGCIMGEMI 219
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 81/193 (41%), Gaps = 22/193 (11%)
Query: 332 LGTGAYGTVY------AGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRL 385
LG+GA+ V+ GKL + K +RD+ + NEI +L + H N++ L
Sbjct: 17 LGSGAFSEVFLVKQRLTGKLFALKCIK-KSPAFRDSS----LENEIAVLKKIKHENIVTL 71
Query: 386 LGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPP 445
LV + + G L + ERG YLH
Sbjct: 72 EDIYESTTHYYLVMQLVSGGELFDRI-LERGVYTE-KDASLVIQQVLSAVKYLHEN---G 126
Query: 446 IYHRDIKSSNILL---DYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFH 502
I HRD+K N+L + N + + DFGLS++ E + I + GTPGY+ P+
Sbjct: 127 IVHRDLKPENLLYLTPEENSKIMITDFGLSKM---EQNGIMSTACGTPGYVAPEVLAQKP 183
Query: 503 LSDKSDVYSFGVV 515
S D +S GV+
Sbjct: 184 YSKAVDCWSIGVI 196
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 101/233 (43%), Gaps = 33/233 (14%)
Query: 307 GNSSVPFYPYKEIEKATSFFSEKHR----LGTGAYGTVYAG-KLHNDDWVAIKRFR--YR 359
G+ P + +E+ K E+++ +G+GAYG+V A VA+K+ ++
Sbjct: 1 GSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 60
Query: 360 DTDSIDQVMNEIKLLSSVSHPNLLRLLGC-----CIEEGEPI-LVYEFM----PNGTLCQ 409
+ E++LL + H N++ LL +EE + LV M N CQ
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 120
Query: 410 HLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADF 469
L + L + Y+HSA I HRD+K SN+ ++ + K+ DF
Sbjct: 121 KLTDDHVQFLIYQILRGLK--------YIHSA---DIIHRDLKPSNLAVNEDCELKILDF 169
Query: 470 GLSRLGMTESSHISTAPQGTPGYLDPQYH-QYFHLSDKSDVYSFGVVLIEIIT 521
GL+R E T T Y P+ + H + D++S G ++ E++T
Sbjct: 170 GLARHTDDE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 91/200 (45%), Gaps = 23/200 (11%)
Query: 332 LGTGAYGTV---YAGKLHNDDWVAIKRFR--YRDTDSIDQVMNEIKLLSSVSHPNLLRLL 386
+G+GA G V Y L D VAIK+ +++ + E+ L+ V+H N++ LL
Sbjct: 32 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLL 89
Query: 387 GC-----CIEEGEPI-LVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHS 440
+EE + + LV E M + L Q +Q E L +LHS
Sbjct: 90 NVFTPQKTLEEFQDVYLVMELM-DANLXQVIQME----LDHERMSYLLYQMLCGIKHLHS 144
Query: 441 AMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQY 500
A I HRD+K SNI++ + K+ DFGL+R T S + T T Y P+
Sbjct: 145 A---GIIHRDLKPSNIVVKSDXTLKILDFGLARTAGT--SFMMTPYVVTRYYRAPEVILG 199
Query: 501 FHLSDKSDVYSFGVVLIEII 520
+ D++S G ++ E++
Sbjct: 200 MGYKENVDIWSVGCIMGEMV 219
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 89/199 (44%), Gaps = 21/199 (10%)
Query: 332 LGTGAYGTV---YAGKLHNDDWVAIKRFR--YRDTDSIDQVMNEIKLLSSVSHPNLLRLL 386
+G+GA G V Y L + VAIK+ +++ + E+ L+ V+H N++ LL
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 387 GC-----CIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSA 441
+EE + + + + + LCQ +Q E L +LHSA
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDANLCQVIQME----LDHERMSYLLYQMLCGIKHLHSA 145
Query: 442 MNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYF 501
I HRD+K SNI++ + K+ DFGL+R T S + T Y P+
Sbjct: 146 ---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMMEPEVVTRYYRAPEVILGM 200
Query: 502 HLSDKSDVYSFGVVLIEII 520
+ D++S G ++ E++
Sbjct: 201 GYKENVDLWSVGCIMGEMV 219
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 88/213 (41%), Gaps = 42/213 (19%)
Query: 326 FSEKHR----LGTGAYGTV-----------YAGKLHNDDWVAIKRFRYRDTDSIDQVMNE 370
F+E++ LG G++G V YA K+ N + +DT +I + E
Sbjct: 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASA-----KNKDTSTI---LRE 71
Query: 371 IKLLSSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTLCQHL-QRERGSGLPWXXXXXXXX 429
++LL + HPN+++L + +V E G L + +R+R S
Sbjct: 72 VELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSE---HDAARIIK 128
Query: 430 XXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRS---KVADFGLS---RLGMTESSHIS 483
Y+H I HRD+K NILL+ + K+ DFGLS + I
Sbjct: 129 QVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIG 185
Query: 484 TAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVL 516
TA P L Y + K DV+S GV+L
Sbjct: 186 TAYYIAPEVLRGTYDE------KCDVWSAGVIL 212
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 92/200 (46%), Gaps = 23/200 (11%)
Query: 332 LGTGAYGTV---YAGKLHNDDWVAIKRFR--YRDTDSIDQVMNEIKLLSSVSHPNLLRLL 386
+G+GA G V Y L D VAIK+ +++ + E+ L+ V+H N++ LL
Sbjct: 32 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 89
Query: 387 GC-----CIEEGEPI-LVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHS 440
+EE + + LV E M + L Q +Q E L +LHS
Sbjct: 90 NVFTPQKTLEEFQDVYLVMELM-DANLXQVIQME----LDHERMSYLLYQMLXGIKHLHS 144
Query: 441 AMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQY 500
A I HRD+K SNI++ + K+ DFGL+R T S + T T Y P+
Sbjct: 145 A---GIIHRDLKPSNIVVKSDXTLKILDFGLARTAGT--SFMMTPYVVTRYYRAPEVILG 199
Query: 501 FHLSDKSDVYSFGVVLIEII 520
+ D++S G ++ E++
Sbjct: 200 MGYKENVDIWSVGCIMGEMV 219
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 82/204 (40%), Gaps = 24/204 (11%)
Query: 332 LGTGAYGTVY---------AGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNL 382
LG G YG V+ GK+ V K R+ E +L V HP +
Sbjct: 25 LGKGGYGKVFQVRKVTGANTGKIFAMK-VLKKAMIVRNAKDTAHTKAERNILEEVKHPFI 83
Query: 383 LRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXX-XXXXXXXXXXXYLHSA 441
+ L+ G+ L+ E++ G L L+RE G+ +LH
Sbjct: 84 VDLIYAFQTGGKLYLILEYLSGGELFMQLERE---GIFMEDTACFYLAEISMALGHLHQK 140
Query: 442 MNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQ---GTPGYLDPQYH 498
I +RD+K NI+L++ K+ DFGL + ES H T GT Y+ P+
Sbjct: 141 ---GIIYRDLKPENIMLNHQGHVKLTDFGLCK----ESIHDGTVTHXFCGTIEYMAPEIL 193
Query: 499 QYFHLSDKSDVYSFGVVLIEIITA 522
+ D +S G ++ +++T
Sbjct: 194 MRSGHNRAVDWWSLGALMYDMLTG 217
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 82/204 (40%), Gaps = 24/204 (11%)
Query: 332 LGTGAYGTVY---------AGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNL 382
LG G YG V+ GK+ V K R+ E +L V HP +
Sbjct: 25 LGKGGYGKVFQVRKVTGANTGKIFAMK-VLKKAMIVRNAKDTAHTKAERNILEEVKHPFI 83
Query: 383 LRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXX-XXXXXXXXXXXYLHSA 441
+ L+ G+ L+ E++ G L L+RE G+ +LH
Sbjct: 84 VDLIYAFQTGGKLYLILEYLSGGELFMQLERE---GIFMEDTACFYLAEISMALGHLHQK 140
Query: 442 MNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQ---GTPGYLDPQYH 498
I +RD+K NI+L++ K+ DFGL + ES H T GT Y+ P+
Sbjct: 141 ---GIIYRDLKPENIMLNHQGHVKLTDFGLCK----ESIHDGTVTHTFCGTIEYMAPEIL 193
Query: 499 QYFHLSDKSDVYSFGVVLIEIITA 522
+ D +S G ++ +++T
Sbjct: 194 MRSGHNRAVDWWSLGALMYDMLTG 217
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 99/228 (43%), Gaps = 33/228 (14%)
Query: 312 PFYPYKEIEKATSFFSEKHR----LGTGAYGTVYAG-KLHNDDWVAIKRFR--YRDTDSI 364
P + +E+ K E+++ +G+GAYG+V A VA+K+ ++
Sbjct: 11 PTFYRQELNKTIWEVPERYQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 70
Query: 365 DQVMNEIKLLSSVSHPNLLRLLGC-----CIEEGEPI-LVYEFM----PNGTLCQHLQRE 414
+ E++LL + H N++ LL +EE + LV M N CQ L +
Sbjct: 71 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 130
Query: 415 RGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRL 474
L + Y+HSA I HRD+K SN+ ++ + K+ DFGL+R
Sbjct: 131 HVQFLIYQILRGLK--------YIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLARH 179
Query: 475 GMTESSHISTAPQGTPGYLDPQYH-QYFHLSDKSDVYSFGVVLIEIIT 521
E T T Y P+ + H + D++S G ++ E++T
Sbjct: 180 TDDE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 223
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 85/197 (43%), Gaps = 10/197 (5%)
Query: 332 LGTGAYGTV-YAGKLHNDDWVAIKRFRYR---DTDSIDQVMNEIKLLSSVSHPNLLRLLG 387
LG G++ TV A +L AIK R + + V E ++S + HP ++L
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 99
Query: 388 CCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIY 447
++ + + NG L +++ R+ GS YLH I
Sbjct: 100 TFQDDEKLYFGLSYAKNGELLKYI-RKIGS-FDETCTRFYTAEIVSALEYLHGK---GII 154
Query: 448 HRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHI-STAPQGTPGYLDPQYHQYFHLSDK 506
HRD+K NILL+ + ++ DFG +++ ES + GT Y+ P+
Sbjct: 155 HRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAXKS 214
Query: 507 SDVYSFGVVLIEIITAL 523
SD+++ G ++ +++ L
Sbjct: 215 SDLWALGCIIYQLVAGL 231
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 92/227 (40%), Gaps = 27/227 (11%)
Query: 317 KEIEKATSFFSEKHRLGTGAYGTVYAGKL------HNDDWVAIKRFRYRDTDSI-DQVMN 369
KEI + F E+ LG +G VY G L VAIK + + + ++ +
Sbjct: 4 KEISLSAVRFMEE--LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRH 61
Query: 370 EIKLLSSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTLCQHL--------------QRER 415
E L + + HPN++ LLG ++ +++ + +G L + L R
Sbjct: 62 EAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTV 121
Query: 416 GSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLG 475
S L YL S + H+D+ + N+L+ K++D GL R
Sbjct: 122 KSALEPPDFVHLVAQIAAGMEYLSSHH---VVHKDLATRNVLVYDKLNVKISDLGLFREV 178
Query: 476 MTESSHISTAPQGTP-GYLDPQYHQYFHLSDKSDVYSFGVVLIEIIT 521
+ P ++ P+ Y S SD++S+GVVL E+ +
Sbjct: 179 YAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 225
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 92/200 (46%), Gaps = 23/200 (11%)
Query: 332 LGTGAYGTV---YAGKLHNDDWVAIKRFR--YRDTDSIDQVMNEIKLLSSVSHPNLLRLL 386
+G+GA G V Y L D VAIK+ +++ + E+ L+ V+H N++ LL
Sbjct: 25 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 82
Query: 387 GC-----CIEEGEPI-LVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHS 440
+EE + + LV E M + L Q +Q E L +LHS
Sbjct: 83 NVFTPQKTLEEFQDVYLVMELM-DANLXQVIQME----LDHERMSYLLYQMLXGIKHLHS 137
Query: 441 AMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQY 500
A I HRD+K SNI++ + K+ DFGL+R T S + T T Y P+
Sbjct: 138 A---GIIHRDLKPSNIVVKSDXTLKILDFGLARTAGT--SFMMTPYVVTRYYRAPEVILG 192
Query: 501 FHLSDKSDVYSFGVVLIEII 520
+ D++S G ++ E++
Sbjct: 193 MGYKENVDIWSVGCIMGEMV 212
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 88/207 (42%), Gaps = 21/207 (10%)
Query: 332 LGTGAYGTVYAGK---LHNDD---WVAIKRFRY--RDTDSIDQVMNEIKLLSSVSHPNLL 383
LG GA+G VY G+ + ND VA+K + D +D +M E ++S +H N++
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM-EALIISKFNHQNIV 97
Query: 384 RLLGCCIEEGEPILVYEFMPNGTLCQHLQRERG-----SGLPWXXXXXXXXXXXXXXXYL 438
R +G ++ ++ E M G L L+ R S L YL
Sbjct: 98 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 157
Query: 439 HSAMNPPIYHRDIKSSNILLD---YNYRSKVADFGLSRLGMTESSHISTAPQGTP-GYLD 494
HRDI + N LL +K+ DFG+++ S + P ++
Sbjct: 158 EENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPVKWMP 214
Query: 495 PQYHQYFHLSDKSDVYSFGVVLIEIIT 521
P+ + K+D +SFGV+L EI +
Sbjct: 215 PEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 99/228 (43%), Gaps = 33/228 (14%)
Query: 312 PFYPYKEIEKATSFFSEKHR----LGTGAYGTVYAG-KLHNDDWVAIKRFR--YRDTDSI 364
P + +E+ K E+++ +G+GAYG+V A VA+K+ ++
Sbjct: 13 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 72
Query: 365 DQVMNEIKLLSSVSHPNLLRLLGC-----CIEEGEPI-LVYEFM----PNGTLCQHLQRE 414
+ E++LL + H N++ LL +EE + LV M N CQ L +
Sbjct: 73 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 132
Query: 415 RGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRL 474
L + Y+HSA I HRD+K SN+ ++ + K+ DFGL+R
Sbjct: 133 HVQFLIYQILRGLK--------YIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARH 181
Query: 475 GMTESSHISTAPQGTPGYLDPQYH-QYFHLSDKSDVYSFGVVLIEIIT 521
E T T Y P+ + H + D++S G ++ E++T
Sbjct: 182 TADE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 225
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 108/248 (43%), Gaps = 19/248 (7%)
Query: 317 KEIEKATSFFSEKHRLGTGAYGTV-YAGKLHNDDWVAIKRFRYRDTDS-IDQVMNEIKLL 374
K+ ++ ++ +GTG + V A + + VAIK S + ++ EI+ L
Sbjct: 3 KDYDELLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEAL 62
Query: 375 SSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXX 434
++ H ++ +L + +V E+ P G L ++ + L
Sbjct: 63 KNLRHQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQ--DRLSEEETRVVFRQIVSA 120
Query: 435 XXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGL-SRLGMTESSHISTAPQGTPGYL 493
Y+HS HRD+K N+L D ++ K+ DFGL ++ + H+ T G+ Y
Sbjct: 121 VAYVHSQGYA---HRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCC-GSLAYA 176
Query: 494 DPQYHQ-YFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDE 552
P+ Q +L ++DV+S G++L ++ P + N+ AL +I RG D
Sbjct: 177 APELIQGKSYLGSEADVWSMGILLYVLMCGF------LPFDDDNVMAL-YKKIMRGKYD- 228
Query: 553 IIDPYLEP 560
+ +L P
Sbjct: 229 -VPKWLSP 235
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 99/228 (43%), Gaps = 33/228 (14%)
Query: 312 PFYPYKEIEKATSFFSEKHR----LGTGAYGTVYAG-KLHNDDWVAIKRFR--YRDTDSI 364
P + +E+ K E+++ +G+GAYG+V A VA+K+ ++
Sbjct: 16 PTFYRQELNKTIWEVPERYQNLAPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHA 75
Query: 365 DQVMNEIKLLSSVSHPNLLRLLGC-----CIEEGEPI-LVYEFM----PNGTLCQHLQRE 414
+ E++LL + H N++ LL +EE + LV M N CQ L +
Sbjct: 76 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 135
Query: 415 RGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRL 474
L + Y+HSA I HRD+K SN+ ++ + K+ DFGL+R
Sbjct: 136 HVQFLIYQILRGLK--------YIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARH 184
Query: 475 GMTESSHISTAPQGTPGYLDPQYH-QYFHLSDKSDVYSFGVVLIEIIT 521
E T T Y P+ + H + D++S G ++ E++T
Sbjct: 185 TDDE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 228
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 99/228 (43%), Gaps = 33/228 (14%)
Query: 312 PFYPYKEIEKATSFFSEKHR----LGTGAYGTVYAG-KLHNDDWVAIKRFR--YRDTDSI 364
P + +E+ K E+++ +G+GAYG+V A VA+K+ ++
Sbjct: 13 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 72
Query: 365 DQVMNEIKLLSSVSHPNLLRLLGC-----CIEEGEPI-LVYEFM----PNGTLCQHLQRE 414
+ E++LL + H N++ LL +EE + LV M N CQ L +
Sbjct: 73 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 132
Query: 415 RGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRL 474
L + Y+HSA I HRD+K SN+ ++ + K+ DFGL+R
Sbjct: 133 HVQFLIYQILRGLK--------YIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARH 181
Query: 475 GMTESSHISTAPQGTPGYLDPQYH-QYFHLSDKSDVYSFGVVLIEIIT 521
E T T Y P+ + H + D++S G ++ E++T
Sbjct: 182 TADE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 225
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 99/228 (43%), Gaps = 33/228 (14%)
Query: 312 PFYPYKEIEKATSFFSEKHR----LGTGAYGTVYAG-KLHNDDWVAIKRFR--YRDTDSI 364
P + +E+ K E+++ +G+GAYG+V A VA+K+ ++
Sbjct: 13 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 72
Query: 365 DQVMNEIKLLSSVSHPNLLRLLGC-----CIEEGEPI-LVYEFM----PNGTLCQHLQRE 414
+ E++LL + H N++ LL +EE + LV M N CQ L +
Sbjct: 73 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 132
Query: 415 RGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRL 474
L + Y+HSA I HRD+K SN+ ++ + K+ DFGL+R
Sbjct: 133 HVQFLIYQILRGLK--------YIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARH 181
Query: 475 GMTESSHISTAPQGTPGYLDPQYH-QYFHLSDKSDVYSFGVVLIEIIT 521
E T T Y P+ + H + D++S G ++ E++T
Sbjct: 182 TADE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 225
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 86/197 (43%), Gaps = 10/197 (5%)
Query: 332 LGTGAYGTV-YAGKLHNDDWVAIKRFRYR---DTDSIDQVMNEIKLLSSVSHPNLLRLLG 387
LG G++ TV A +L AIK R + + V E ++S + HP ++L
Sbjct: 41 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 100
Query: 388 CCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIY 447
++ + + NG L +++ R+ GS YLH I
Sbjct: 101 TFQDDEKLYFGLSYAKNGELLKYI-RKIGS-FDETCTRFYTAEIVSALEYLHGK---GII 155
Query: 448 HRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHI-STAPQGTPGYLDPQYHQYFHLSDK 506
HRD+K NILL+ + ++ DFG +++ ES + + GT Y+ P+
Sbjct: 156 HRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKS 215
Query: 507 SDVYSFGVVLIEIITAL 523
SD+++ G ++ +++ L
Sbjct: 216 SDLWALGCIIYQLVAGL 232
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 99/228 (43%), Gaps = 33/228 (14%)
Query: 312 PFYPYKEIEKATSFFSEKHR----LGTGAYGTVYAG-KLHNDDWVAIKRFR--YRDTDSI 364
P + +E+ K E+++ +G+GAYG+V A VA+K+ ++
Sbjct: 25 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHA 84
Query: 365 DQVMNEIKLLSSVSHPNLLRLLGC-----CIEEGEPI-LVYEFM----PNGTLCQHLQRE 414
+ E++LL + H N++ LL +EE + LV M N CQ L +
Sbjct: 85 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 144
Query: 415 RGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRL 474
L + Y+HSA I HRD+K SN+ ++ + K+ DFGL+R
Sbjct: 145 HVQFLIYQILRGLK--------YIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARH 193
Query: 475 GMTESSHISTAPQGTPGYLDPQYH-QYFHLSDKSDVYSFGVVLIEIIT 521
E T T Y P+ + H + D++S G ++ E++T
Sbjct: 194 TDDE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 237
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 99/228 (43%), Gaps = 33/228 (14%)
Query: 312 PFYPYKEIEKATSFFSEKHR----LGTGAYGTVYAG-KLHNDDWVAIKRFR--YRDTDSI 364
P + +E+ K E+++ +G+GAYG+V A VA+K+ ++
Sbjct: 2 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHA 61
Query: 365 DQVMNEIKLLSSVSHPNLLRLLGC-----CIEEGEPI-LVYEFM----PNGTLCQHLQRE 414
+ E++LL + H N++ LL +EE + LV M N CQ L +
Sbjct: 62 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 121
Query: 415 RGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRL 474
L + Y+HSA I HRD+K SN+ ++ + K+ DFGL+R
Sbjct: 122 HVQFLIYQILRGLK--------YIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARH 170
Query: 475 GMTESSHISTAPQGTPGYLDPQYH-QYFHLSDKSDVYSFGVVLIEIIT 521
E T T Y P+ + H + D++S G ++ E++T
Sbjct: 171 TDDE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 214
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 99/228 (43%), Gaps = 33/228 (14%)
Query: 312 PFYPYKEIEKATSFFSEKHR----LGTGAYGTVYAG-KLHNDDWVAIKRFR--YRDTDSI 364
P + +E+ K E+++ +G+GAYG+V A VA+K+ ++
Sbjct: 6 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHA 65
Query: 365 DQVMNEIKLLSSVSHPNLLRLLGC-----CIEEGEPI-LVYEFM----PNGTLCQHLQRE 414
+ E++LL + H N++ LL +EE + LV M N CQ L +
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 125
Query: 415 RGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRL 474
L + Y+HSA I HRD+K SN+ ++ + K+ DFGL+R
Sbjct: 126 HVQFLIYQILRGLK--------YIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARH 174
Query: 475 GMTESSHISTAPQGTPGYLDPQYH-QYFHLSDKSDVYSFGVVLIEIIT 521
E T T Y P+ + H + D++S G ++ E++T
Sbjct: 175 TDDE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 92/227 (40%), Gaps = 27/227 (11%)
Query: 317 KEIEKATSFFSEKHRLGTGAYGTVYAGKL------HNDDWVAIKRFRYRDTDSI-DQVMN 369
KEI + F E+ LG +G VY G L VAIK + + + ++ +
Sbjct: 21 KEISLSAVRFMEE--LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRH 78
Query: 370 EIKLLSSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTLCQHL--------------QRER 415
E L + + HPN++ LLG ++ +++ + +G L + L R
Sbjct: 79 EAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTV 138
Query: 416 GSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLG 475
S L YL S + H+D+ + N+L+ K++D GL R
Sbjct: 139 KSALEPPDFVHLVAQIAAGMEYLSSHH---VVHKDLATRNVLVYDKLNVKISDLGLFREV 195
Query: 476 MTESSHISTAPQGTP-GYLDPQYHQYFHLSDKSDVYSFGVVLIEIIT 521
+ P ++ P+ Y S SD++S+GVVL E+ +
Sbjct: 196 YAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 242
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 99/228 (43%), Gaps = 33/228 (14%)
Query: 312 PFYPYKEIEKATSFFSEKHR----LGTGAYGTVYAG-KLHNDDWVAIKRFR--YRDTDSI 364
P + +E+ K E+++ +G+GAYG+V A VA+K+ ++
Sbjct: 26 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHA 85
Query: 365 DQVMNEIKLLSSVSHPNLLRLLGC-----CIEEGEPI-LVYEFM----PNGTLCQHLQRE 414
+ E++LL + H N++ LL +EE + LV M N CQ L +
Sbjct: 86 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 145
Query: 415 RGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRL 474
L + Y+HSA I HRD+K SN+ ++ + K+ DFGL+R
Sbjct: 146 HVQFLIYQILRGLK--------YIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARH 194
Query: 475 GMTESSHISTAPQGTPGYLDPQYH-QYFHLSDKSDVYSFGVVLIEIIT 521
E T T Y P+ + H + D++S G ++ E++T
Sbjct: 195 TDDE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 238
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 85/197 (43%), Gaps = 10/197 (5%)
Query: 332 LGTGAYGTV-YAGKLHNDDWVAIKRFRYR---DTDSIDQVMNEIKLLSSVSHPNLLRLLG 387
LG G++ TV A +L AIK R + + V E ++S + HP ++L
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 99
Query: 388 CCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIY 447
++ + + NG L +++ R+ GS YLH I
Sbjct: 100 TFQDDEKLYFGLSYAKNGELLKYI-RKIGS-FDETCTRFYTAEIVSALEYLHGK---GII 154
Query: 448 HRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHI-STAPQGTPGYLDPQYHQYFHLSDK 506
HRD+K NILL+ + ++ DFG +++ ES + GT Y+ P+
Sbjct: 155 HRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKS 214
Query: 507 SDVYSFGVVLIEIITAL 523
SD+++ G ++ +++ L
Sbjct: 215 SDLWALGCIIYQLVAGL 231
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 99/228 (43%), Gaps = 33/228 (14%)
Query: 312 PFYPYKEIEKATSFFSEKHR----LGTGAYGTVYAG-KLHNDDWVAIKRFR--YRDTDSI 364
P + +E+ K E+++ +G+GAYG+V A VA+K+ ++
Sbjct: 17 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 76
Query: 365 DQVMNEIKLLSSVSHPNLLRLLGC-----CIEEGEPI-LVYEFM----PNGTLCQHLQRE 414
+ E++LL + H N++ LL +EE + LV M N CQ L +
Sbjct: 77 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 136
Query: 415 RGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRL 474
L + Y+HSA I HRD+K SN+ ++ + K+ DFGL+R
Sbjct: 137 HVQFLIYQILRGLK--------YIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLARH 185
Query: 475 GMTESSHISTAPQGTPGYLDPQYH-QYFHLSDKSDVYSFGVVLIEIIT 521
E T T Y P+ + H + D++S G ++ E++T
Sbjct: 186 TDDE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 229
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 99/228 (43%), Gaps = 33/228 (14%)
Query: 312 PFYPYKEIEKATSFFSEKHR----LGTGAYGTVYAG-KLHNDDWVAIKRFR--YRDTDSI 364
P + +E+ K E+++ +G+GAYG+V A VA+K+ ++
Sbjct: 11 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 70
Query: 365 DQVMNEIKLLSSVSHPNLLRLLGC-----CIEEGEPI-LVYEFM----PNGTLCQHLQRE 414
+ E++LL + H N++ LL +EE + LV M N CQ L +
Sbjct: 71 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 130
Query: 415 RGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRL 474
L + Y+HSA I HRD+K SN+ ++ + K+ DFGL+R
Sbjct: 131 HVQFLIYQILRGLK--------YIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLARH 179
Query: 475 GMTESSHISTAPQGTPGYLDPQYH-QYFHLSDKSDVYSFGVVLIEIIT 521
E T T Y P+ + H + D++S G ++ E++T
Sbjct: 180 TDDE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 223
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 99/228 (43%), Gaps = 33/228 (14%)
Query: 312 PFYPYKEIEKATSFFSEKHR----LGTGAYGTVYAG-KLHNDDWVAIKRFR--YRDTDSI 364
P + +E+ K E+++ +G+GAYG+V A VA+K+ ++
Sbjct: 6 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 65
Query: 365 DQVMNEIKLLSSVSHPNLLRLLGC-----CIEEGEPI-LVYEFM----PNGTLCQHLQRE 414
+ E++LL + H N++ LL +EE + LV M N CQ L +
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 125
Query: 415 RGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRL 474
L + Y+HSA I HRD+K SN+ ++ + K+ DFGL+R
Sbjct: 126 HVQFLIYQILRGLK--------YIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARH 174
Query: 475 GMTESSHISTAPQGTPGYLDPQYH-QYFHLSDKSDVYSFGVVLIEIIT 521
E T T Y P+ + H + D++S G ++ E++T
Sbjct: 175 TDDE----MTGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 88/213 (41%), Gaps = 42/213 (19%)
Query: 326 FSEKHR----LGTGAYGTV-----------YAGKLHNDDWVAIKRFRYRDTDSIDQVMNE 370
F+E++ LG G++G V YA K+ N + +DT +I + E
Sbjct: 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINK-----ASAKNKDTSTI---LRE 71
Query: 371 IKLLSSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTLCQHL-QRERGSGLPWXXXXXXXX 429
++LL + HPN+++L + +V E G L + +R+R S
Sbjct: 72 VELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSE---HDAARIIK 128
Query: 430 XXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRS---KVADFGLS---RLGMTESSHIS 483
Y+H I HRD+K NILL+ + K+ DFGLS + I
Sbjct: 129 QVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIG 185
Query: 484 TAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVL 516
TA P L Y +K DV+S GV+L
Sbjct: 186 TAYYIAPEVLRGTY------DEKCDVWSAGVIL 212
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 88/213 (41%), Gaps = 42/213 (19%)
Query: 326 FSEKHR----LGTGAYGTV-----------YAGKLHNDDWVAIKRFRYRDTDSIDQVMNE 370
F+E++ LG G++G V YA K+ N + +DT +I + E
Sbjct: 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINK-----ASAKNKDTSTI---LRE 71
Query: 371 IKLLSSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTLCQHL-QRERGSGLPWXXXXXXXX 429
++LL + HPN+++L + +V E G L + +R+R S
Sbjct: 72 VELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSE---HDAARIIK 128
Query: 430 XXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRS---KVADFGLS---RLGMTESSHIS 483
Y+H I HRD+K NILL+ + K+ DFGLS + I
Sbjct: 129 QVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIG 185
Query: 484 TAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVL 516
TA P L Y +K DV+S GV+L
Sbjct: 186 TAYYIAPEVLRGTY------DEKCDVWSAGVIL 212
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 86/200 (43%), Gaps = 13/200 (6%)
Query: 332 LGTGAYGTVYAGKLHND--DWVAIKRFRYR-DTDSIDQVMNEIKLLSSVSH-PNLLRLLG 387
+G GAYG+V +H +A+KR R D Q++ ++ ++ S P +++ G
Sbjct: 30 IGRGAYGSV-NKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYG 88
Query: 388 CCIEEGEPILVYEFMPNG--TLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPP 445
EG+ + E M +++ +P +L N
Sbjct: 89 ALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKE--NLK 146
Query: 446 IYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTA---PQGTPGYLDPQYHQYFH 502
I HRDIK SNILLD + K+ DFG+S + + A P P +DP + +
Sbjct: 147 IIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRDAGCRPYMAPERIDPSASRQGY 206
Query: 503 LSDKSDVYSFGVVLIEIITA 522
+SDV+S G+ L E+ T
Sbjct: 207 -DVRSDVWSLGITLYELATG 225
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 85/197 (43%), Gaps = 10/197 (5%)
Query: 332 LGTGAYGTV-YAGKLHNDDWVAIKRFRYR---DTDSIDQVMNEIKLLSSVSHPNLLRLLG 387
LG G++ TV A +L AIK R + + V E ++S + HP ++L
Sbjct: 43 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 102
Query: 388 CCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIY 447
++ + + NG L +++ R+ GS YLH I
Sbjct: 103 TFQDDEKLYFGLSYAKNGELLKYI-RKIGS-FDETCTRFYTAEIVSALEYLHGK---GII 157
Query: 448 HRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHI-STAPQGTPGYLDPQYHQYFHLSDK 506
HRD+K NILL+ + ++ DFG +++ ES + GT Y+ P+
Sbjct: 158 HRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKS 217
Query: 507 SDVYSFGVVLIEIITAL 523
SD+++ G ++ +++ L
Sbjct: 218 SDLWALGCIIYQLVAGL 234
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 89/199 (44%), Gaps = 21/199 (10%)
Query: 332 LGTGAYGTV---YAGKLHNDDWVAIKRFR--YRDTDSIDQVMNEIKLLSSVSHPNLLRLL 386
+G+GA G V Y L + VAIK+ +++ + E+ L+ V+H N++ LL
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLL 89
Query: 387 GC-----CIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSA 441
+EE + + + + + L Q +Q E L +LHSA
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDANLSQVIQME----LDHERMSYLLYQMLCGIKHLHSA 145
Query: 442 MNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYF 501
I HRD+K SNI++ + K+ DFGL+R T S + T T Y P+
Sbjct: 146 ---GIIHRDLKPSNIVVKSDATLKILDFGLARTAGT--SFMMTPYVVTRYYRAPEVILGM 200
Query: 502 HLSDKSDVYSFGVVLIEII 520
+ D++S G ++ E+I
Sbjct: 201 GYKENVDIWSVGCIMGEMI 219
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 99/228 (43%), Gaps = 33/228 (14%)
Query: 312 PFYPYKEIEKATSFFSEKHR----LGTGAYGTVYAG-KLHNDDWVAIKRFR--YRDTDSI 364
P + +E+ K E+++ +G+GAYG+V A VA+K+ ++
Sbjct: 8 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 67
Query: 365 DQVMNEIKLLSSVSHPNLLRLLGC-----CIEEGEPI-LVYEFM----PNGTLCQHLQRE 414
+ E++LL + H N++ LL +EE + LV M N CQ L +
Sbjct: 68 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 127
Query: 415 RGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRL 474
L + Y+HSA I HRD+K SN+ ++ + K+ DFGL+R
Sbjct: 128 HVQFLIYQILRGLK--------YIHSA---DIIHRDLKPSNLAVNEDSELKILDFGLARH 176
Query: 475 GMTESSHISTAPQGTPGYLDPQYH-QYFHLSDKSDVYSFGVVLIEIIT 521
E T T Y P+ + H + D++S G ++ E++T
Sbjct: 177 TDDE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 220
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 89/199 (44%), Gaps = 21/199 (10%)
Query: 332 LGTGAYGTV---YAGKLHNDDWVAIKRFR--YRDTDSIDQVMNEIKLLSSVSHPNLLRLL 386
+G+GA G V Y L + VAIK+ +++ + E+ L+ V+H N++ LL
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 387 GC-----CIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSA 441
+EE + + + + + L Q +Q E L +LHSA
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDANLSQVIQME----LDHERMSYLLYQMLCGIKHLHSA 145
Query: 442 MNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYF 501
I HRD+K SNI++ + K+ DFGL+R T S + T T Y P+
Sbjct: 146 ---GIIHRDLKPSNIVVKSDATLKILDFGLARTAGT--SFMMTPYVVTRYYRAPEVILGM 200
Query: 502 HLSDKSDVYSFGVVLIEII 520
+ D++S G ++ E+I
Sbjct: 201 GYKENVDIWSVGCIMGEMI 219
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 87/206 (42%), Gaps = 16/206 (7%)
Query: 332 LGTGAYGTV-YAGKLHNDDWVAIKRFRYR---DTDSIDQVMNEIKLLSSVSHPNLLRLLG 387
+G G++G V K A+K + + + + V E++++ + HP L+ L
Sbjct: 23 IGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWY 82
Query: 388 CCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIY 447
+E + +V + + G L HLQ+ YL N I
Sbjct: 83 SFQDEEDMFMVVDLLLGGDLRYHLQQ--NVHFKEETVKLFICELVMALDYLQ---NQRII 137
Query: 448 HRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLSDKS 507
HRD+K NILLD + + DF ++ + E+ + A GT Y+ P+ S K
Sbjct: 138 HRDMKPDNILLDEHGHVHITDFNIAAMLPRETQITTMA--GTKPYMAPEMFS----SRKG 191
Query: 508 DVYSFGVVLIEI-ITALKVVDFSRPH 532
YSF V + +TA +++ RP+
Sbjct: 192 AGYSFAVDWWSLGVTAYELLRGRRPY 217
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 84/205 (40%), Gaps = 27/205 (13%)
Query: 326 FSEKHRLGTGAYGTV-----------YAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLL 374
F LGTG++G V YA K+ + V I+ +NE ++L
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVV-------KLKQIEHTLNEKRIL 95
Query: 375 SSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXX 434
+V+ P L++L + +V E++ G + HL+R P
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP--HARFYAAQIVLT 153
Query: 435 XXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLD 494
YLHS + +RD+K N+L+D +V DFG ++ + + GTP L
Sbjct: 154 FEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----GTPEALA 206
Query: 495 PQYHQYFHLSDKSDVYSFGVVLIEI 519
P+ + D ++ GV++ E+
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 99/228 (43%), Gaps = 33/228 (14%)
Query: 312 PFYPYKEIEKATSFFSEKHR----LGTGAYGTVYAG-KLHNDDWVAIKRFR--YRDTDSI 364
P + +E+ K E+++ +G+GAYG+V A VA+K+ ++
Sbjct: 12 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 71
Query: 365 DQVMNEIKLLSSVSHPNLLRLLGC-----CIEEGEPI-LVYEFM----PNGTLCQHLQRE 414
+ E++LL + H N++ LL +EE + LV M N CQ L +
Sbjct: 72 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 131
Query: 415 RGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRL 474
L + Y+HSA I HRD+K SN+ ++ + K+ DFGL+R
Sbjct: 132 HVQFLIYQILRGLK--------YIHSA---DIIHRDLKPSNLAVNEDSELKILDFGLARH 180
Query: 475 GMTESSHISTAPQGTPGYLDPQYH-QYFHLSDKSDVYSFGVVLIEIIT 521
E T T Y P+ + H + D++S G ++ E++T
Sbjct: 181 TDDE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 224
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 85/197 (43%), Gaps = 10/197 (5%)
Query: 332 LGTGAYGT-VYAGKLHNDDWVAIKRFRYR---DTDSIDQVMNEIKLLSSVSHPNLLRLLG 387
LG G++ T V A +L AIK R + + V E ++S + HP ++L
Sbjct: 38 LGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 97
Query: 388 CCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIY 447
++ + + NG L +++ R+ GS YLH I
Sbjct: 98 TFQDDEKLYFGLSYAKNGELLKYI-RKIGS-FDETCTRFYTAEIVSALEYLHGK---GII 152
Query: 448 HRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHI-STAPQGTPGYLDPQYHQYFHLSDK 506
HRD+K NILL+ + ++ DFG +++ ES + GT Y+ P+
Sbjct: 153 HRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKS 212
Query: 507 SDVYSFGVVLIEIITAL 523
SD+++ G ++ +++ L
Sbjct: 213 SDLWALGCIIYQLVAGL 229
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 100/230 (43%), Gaps = 33/230 (14%)
Query: 310 SVPFYPYKEIEKATSFFSEKHR----LGTGAYGTVYAG-KLHNDDWVAIKRFR--YRDTD 362
S P + +E+ K E+++ +G+GAYG+V A VA+K+ ++
Sbjct: 2 SRPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSII 61
Query: 363 SIDQVMNEIKLLSSVSHPNLLRLLGC-----CIEEGEPI-LVYEFM----PNGTLCQHLQ 412
+ E++LL + H N++ LL +EE + LV M N CQ L
Sbjct: 62 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 121
Query: 413 RERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLS 472
+ L + Y+HSA I HRD+K SN+ ++ + K+ DFGL+
Sbjct: 122 DDHVQFLIYQILRGLK--------YIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA 170
Query: 473 RLGMTESSHISTAPQGTPGYLDPQYH-QYFHLSDKSDVYSFGVVLIEIIT 521
R E T T Y P+ + H + D++S G ++ E++T
Sbjct: 171 RHTDDE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 216
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 72/158 (45%), Gaps = 12/158 (7%)
Query: 364 IDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEP--ILVYEFMPNGTLCQHLQRERGSGLPW 421
I+QV EI +L + HPN+++L+ + E +V+E + G + ++ L
Sbjct: 80 IEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPV---MEVPTLKPLSE 136
Query: 422 XXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSH 481
YLH I HRDIK SN+L+ + K+ADFG+S S
Sbjct: 137 DQARFYFQDLIKGIEYLHYQK---IIHRDIKPSNLLVGEDGHIKIADFGVSN-EFKGSDA 192
Query: 482 ISTAPQGTPGYLDPQYHQYFH--LSDKS-DVYSFGVVL 516
+ + GTP ++ P+ S K+ DV++ GV L
Sbjct: 193 LLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTL 230
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 85/197 (43%), Gaps = 10/197 (5%)
Query: 332 LGTGAYGTV-YAGKLHNDDWVAIKRFRYR---DTDSIDQVMNEIKLLSSVSHPNLLRLLG 387
LG G++ TV A +L AIK R + + V E ++S + HP ++L
Sbjct: 38 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 97
Query: 388 CCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIY 447
++ + + NG L +++ R+ GS YLH I
Sbjct: 98 TFQDDEKLYFGLSYAKNGELLKYI-RKIGS-FDETCTRFYTAEIVSALEYLHGK---GII 152
Query: 448 HRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHI-STAPQGTPGYLDPQYHQYFHLSDK 506
HRD+K NILL+ + ++ DFG +++ ES + GT Y+ P+
Sbjct: 153 HRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKS 212
Query: 507 SDVYSFGVVLIEIITAL 523
SD+++ G ++ +++ L
Sbjct: 213 SDLWALGCIIYQLVAGL 229
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 85/197 (43%), Gaps = 10/197 (5%)
Query: 332 LGTGAYGTV-YAGKLHNDDWVAIKRFRYR---DTDSIDQVMNEIKLLSSVSHPNLLRLLG 387
LG G++ TV A +L AIK R + + V E ++S + HP ++L
Sbjct: 41 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 100
Query: 388 CCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIY 447
++ + + NG L +++ R+ GS YLH I
Sbjct: 101 TFQDDEKLYFGLSYAKNGELLKYI-RKIGS-FDETCTRFYTAEIVSALEYLHGK---GII 155
Query: 448 HRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHI-STAPQGTPGYLDPQYHQYFHLSDK 506
HRD+K NILL+ + ++ DFG +++ ES + GT Y+ P+
Sbjct: 156 HRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKS 215
Query: 507 SDVYSFGVVLIEIITAL 523
SD+++ G ++ +++ L
Sbjct: 216 SDLWALGCIIYQLVAGL 232
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 85/197 (43%), Gaps = 10/197 (5%)
Query: 332 LGTGAYGTV-YAGKLHNDDWVAIKRFRYR---DTDSIDQVMNEIKLLSSVSHPNLLRLLG 387
LG G++ TV A +L AIK R + + V E ++S + HP ++L
Sbjct: 38 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 97
Query: 388 CCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIY 447
++ + + NG L +++ R+ GS YLH I
Sbjct: 98 TFQDDEKLYFGLSYAKNGELLKYI-RKIGS-FDETCTRFYTAEIVSALEYLHGK---GII 152
Query: 448 HRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHI-STAPQGTPGYLDPQYHQYFHLSDK 506
HRD+K NILL+ + ++ DFG +++ ES + GT Y+ P+
Sbjct: 153 HRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKS 212
Query: 507 SDVYSFGVVLIEIITAL 523
SD+++ G ++ +++ L
Sbjct: 213 SDLWALGCIIYQLVAGL 229
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 85/197 (43%), Gaps = 10/197 (5%)
Query: 332 LGTGAYGTV-YAGKLHNDDWVAIKRFRYR---DTDSIDQVMNEIKLLSSVSHPNLLRLLG 387
LG G++ TV A +L AIK R + + V E ++S + HP ++L
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 99
Query: 388 CCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIY 447
++ + + NG L +++ R+ GS YLH I
Sbjct: 100 TFQDDEKLYFGLSYAKNGELLKYI-RKIGS-FDETCTRFYTAEIVSALEYLHGK---GII 154
Query: 448 HRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHI-STAPQGTPGYLDPQYHQYFHLSDK 506
HRD+K NILL+ + ++ DFG +++ ES + GT Y+ P+
Sbjct: 155 HRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKS 214
Query: 507 SDVYSFGVVLIEIITAL 523
SD+++ G ++ +++ L
Sbjct: 215 SDLWALGCIIYQLVAGL 231
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 85/197 (43%), Gaps = 10/197 (5%)
Query: 332 LGTGAYGTV-YAGKLHNDDWVAIKRFRYR---DTDSIDQVMNEIKLLSSVSHPNLLRLLG 387
LG G++ TV A +L AIK R + + V E ++S + HP ++L
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 99
Query: 388 CCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIY 447
++ + + NG L +++ R+ GS YLH I
Sbjct: 100 TFQDDEKLYFGLSYAKNGELLKYI-RKIGS-FDETCTRFYTAEIVSALEYLHGK---GII 154
Query: 448 HRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHI-STAPQGTPGYLDPQYHQYFHLSDK 506
HRD+K NILL+ + ++ DFG +++ ES + GT Y+ P+
Sbjct: 155 HRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKS 214
Query: 507 SDVYSFGVVLIEIITAL 523
SD+++ G ++ +++ L
Sbjct: 215 SDLWALGCIIYQLVAGL 231
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 99/228 (43%), Gaps = 33/228 (14%)
Query: 312 PFYPYKEIEKATSFFSEKHR----LGTGAYGTVYAG-KLHNDDWVAIKRFR--YRDTDSI 364
P + +E+ K E+++ +G+GAYG+V A VA+K+ ++
Sbjct: 12 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHA 71
Query: 365 DQVMNEIKLLSSVSHPNLLRLLGC-----CIEEGEPI-LVYEFM----PNGTLCQHLQRE 414
+ E++LL + H N++ LL +EE + LV M N CQ L +
Sbjct: 72 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 131
Query: 415 RGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRL 474
L + Y+HSA I HRD+K SN+ ++ + K+ DFGL+R
Sbjct: 132 HVQFLIYQILRGLK--------YIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARH 180
Query: 475 GMTESSHISTAPQGTPGYLDPQYH-QYFHLSDKSDVYSFGVVLIEIIT 521
E T T Y P+ + H + D++S G ++ E++T
Sbjct: 181 TDDE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 224
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 85/197 (43%), Gaps = 10/197 (5%)
Query: 332 LGTGAYGTV-YAGKLHNDDWVAIKRFRYR---DTDSIDQVMNEIKLLSSVSHPNLLRLLG 387
LG G++ TV A +L AIK R + + V E ++S + HP ++L
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 99
Query: 388 CCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIY 447
++ + + NG L +++ R+ GS YLH I
Sbjct: 100 TFQDDEKLYFGLSYAKNGELLKYI-RKIGS-FDETCTRFYTAEIVSALEYLHGK---GII 154
Query: 448 HRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHI-STAPQGTPGYLDPQYHQYFHLSDK 506
HRD+K NILL+ + ++ DFG +++ ES + GT Y+ P+
Sbjct: 155 HRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKS 214
Query: 507 SDVYSFGVVLIEIITAL 523
SD+++ G ++ +++ L
Sbjct: 215 SDLWALGCIIYQLVAGL 231
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 99/228 (43%), Gaps = 33/228 (14%)
Query: 312 PFYPYKEIEKATSFFSEKHR----LGTGAYGTVYAG-KLHNDDWVAIKRFR--YRDTDSI 364
P + +E+ K E+++ +G+GAYG+V A VA+K+ ++
Sbjct: 18 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHA 77
Query: 365 DQVMNEIKLLSSVSHPNLLRLLGC-----CIEEGEPI-LVYEFM----PNGTLCQHLQRE 414
+ E++LL + H N++ LL +EE + LV M N CQ L +
Sbjct: 78 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 137
Query: 415 RGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRL 474
L + Y+HSA I HRD+K SN+ ++ + K+ DFGL+R
Sbjct: 138 HVQFLIYQILRGLK--------YIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARH 186
Query: 475 GMTESSHISTAPQGTPGYLDPQYH-QYFHLSDKSDVYSFGVVLIEIIT 521
E T T Y P+ + H + D++S G ++ E++T
Sbjct: 187 TDDE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 230
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 99/228 (43%), Gaps = 33/228 (14%)
Query: 312 PFYPYKEIEKATSFFSEKHR----LGTGAYGTVYAG-KLHNDDWVAIKRFR--YRDTDSI 364
P + +E+ K E+++ +G+GAYG+V A VA+K+ ++
Sbjct: 6 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 65
Query: 365 DQVMNEIKLLSSVSHPNLLRLLGC-----CIEEGEPI-LVYEFM----PNGTLCQHLQRE 414
+ E++LL + H N++ LL +EE + LV M N CQ L +
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 125
Query: 415 RGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRL 474
L + Y+HSA I HRD+K SN+ ++ + K+ DFGL+R
Sbjct: 126 HVQFLIYQILRGLK--------YIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARH 174
Query: 475 GMTESSHISTAPQGTPGYLDPQYH-QYFHLSDKSDVYSFGVVLIEIIT 521
E T T Y P+ + H + D++S G ++ E++T
Sbjct: 175 TDDE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 99/228 (43%), Gaps = 33/228 (14%)
Query: 312 PFYPYKEIEKATSFFSEKHR----LGTGAYGTVYAG-KLHNDDWVAIKRFR--YRDTDSI 364
P + +E+ K E+++ +G+GAYG+V A VA+K+ ++
Sbjct: 18 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 77
Query: 365 DQVMNEIKLLSSVSHPNLLRLLGC-----CIEEGEPI-LVYEFM----PNGTLCQHLQRE 414
+ E++LL + H N++ LL +EE + LV M N CQ L +
Sbjct: 78 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 137
Query: 415 RGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRL 474
L + Y+HSA I HRD+K SN+ ++ + K+ DFGL+R
Sbjct: 138 HVQFLIYQILRGLK--------YIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARH 186
Query: 475 GMTESSHISTAPQGTPGYLDPQYH-QYFHLSDKSDVYSFGVVLIEIIT 521
E T T Y P+ + H + D++S G ++ E++T
Sbjct: 187 TDDE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 230
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 99/228 (43%), Gaps = 33/228 (14%)
Query: 312 PFYPYKEIEKATSFFSEKHR----LGTGAYGTVYAG-KLHNDDWVAIKRFR--YRDTDSI 364
P + +E+ K E+++ +G+GAYG+V A VA+K+ ++
Sbjct: 18 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 77
Query: 365 DQVMNEIKLLSSVSHPNLLRLLGC-----CIEEGEPI-LVYEFM----PNGTLCQHLQRE 414
+ E++LL + H N++ LL +EE + LV M N CQ L +
Sbjct: 78 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 137
Query: 415 RGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRL 474
L + Y+HSA I HRD+K SN+ ++ + K+ DFGL+R
Sbjct: 138 HVQFLIYQILRGLK--------YIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARH 186
Query: 475 GMTESSHISTAPQGTPGYLDPQYH-QYFHLSDKSDVYSFGVVLIEIIT 521
E T T Y P+ + H + D++S G ++ E++T
Sbjct: 187 TDDE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 230
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 99/228 (43%), Gaps = 33/228 (14%)
Query: 312 PFYPYKEIEKATSFFSEKHR----LGTGAYGTVYAG-KLHNDDWVAIKRFR--YRDTDSI 364
P + +E+ K E+++ +G+GAYG+V A VA+K+ ++
Sbjct: 6 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 65
Query: 365 DQVMNEIKLLSSVSHPNLLRLLGC-----CIEEGEPI-LVYEFM----PNGTLCQHLQRE 414
+ E++LL + H N++ LL +EE + LV M N CQ L +
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 125
Query: 415 RGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRL 474
L + Y+HSA I HRD+K SN+ ++ + K+ DFGL+R
Sbjct: 126 HVQFLIYQILRGLK--------YIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARH 174
Query: 475 GMTESSHISTAPQGTPGYLDPQYH-QYFHLSDKSDVYSFGVVLIEIIT 521
E T T Y P+ + H + D++S G ++ E++T
Sbjct: 175 TDDE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 99/228 (43%), Gaps = 33/228 (14%)
Query: 312 PFYPYKEIEKATSFFSEKHR----LGTGAYGTVYAG-KLHNDDWVAIKRFR--YRDTDSI 364
P + +E+ K E+++ +G+GAYG+V A VA+K+ ++
Sbjct: 6 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 65
Query: 365 DQVMNEIKLLSSVSHPNLLRLLGC-----CIEEGEPI-LVYEFM----PNGTLCQHLQRE 414
+ E++LL + H N++ LL +EE + LV M N CQ L +
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 125
Query: 415 RGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRL 474
L + Y+HSA I HRD+K SN+ ++ + K+ DFGL+R
Sbjct: 126 HVQFLIYQILRGLK--------YIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARH 174
Query: 475 GMTESSHISTAPQGTPGYLDPQYH-QYFHLSDKSDVYSFGVVLIEIIT 521
E T T Y P+ + H + D++S G ++ E++T
Sbjct: 175 TDDE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 99/228 (43%), Gaps = 33/228 (14%)
Query: 312 PFYPYKEIEKATSFFSEKHR----LGTGAYGTVYAG-KLHNDDWVAIKRFR--YRDTDSI 364
P + +E+ K E+++ +G+GAYG+V A VA+K+ ++
Sbjct: 17 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 76
Query: 365 DQVMNEIKLLSSVSHPNLLRLLGC-----CIEEGEPI-LVYEFM----PNGTLCQHLQRE 414
+ E++LL + H N++ LL +EE + LV M N CQ L +
Sbjct: 77 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 136
Query: 415 RGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRL 474
L + Y+HSA I HRD+K SN+ ++ + K+ DFGL+R
Sbjct: 137 HVQFLIYQILRGLK--------YIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARH 185
Query: 475 GMTESSHISTAPQGTPGYLDPQYH-QYFHLSDKSDVYSFGVVLIEIIT 521
E T T Y P+ + H + D++S G ++ E++T
Sbjct: 186 TDDE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 229
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 99/228 (43%), Gaps = 33/228 (14%)
Query: 312 PFYPYKEIEKATSFFSEKHR----LGTGAYGTVYAG-KLHNDDWVAIKRFR--YRDTDSI 364
P + +E+ K E+++ +G+GAYG+V A VA+K+ ++
Sbjct: 26 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 85
Query: 365 DQVMNEIKLLSSVSHPNLLRLLGC-----CIEEGEPI-LVYEFM----PNGTLCQHLQRE 414
+ E++LL + H N++ LL +EE + LV M N CQ L +
Sbjct: 86 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 145
Query: 415 RGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRL 474
L + Y+HSA I HRD+K SN+ ++ + K+ DFGL+R
Sbjct: 146 HVQFLIYQILRGLK--------YIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARH 194
Query: 475 GMTESSHISTAPQGTPGYLDPQYH-QYFHLSDKSDVYSFGVVLIEIIT 521
E T T Y P+ + H + D++S G ++ E++T
Sbjct: 195 TDDE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 238
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 99/228 (43%), Gaps = 33/228 (14%)
Query: 312 PFYPYKEIEKATSFFSEKHR----LGTGAYGTVYAG-KLHNDDWVAIKRFR--YRDTDSI 364
P + +E+ K E+++ +G+GAYG+V A VA+K+ ++
Sbjct: 2 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHA 61
Query: 365 DQVMNEIKLLSSVSHPNLLRLLGC-----CIEEGEPI-LVYEFM----PNGTLCQHLQRE 414
+ E++LL + H N++ LL +EE + LV M N CQ L +
Sbjct: 62 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 121
Query: 415 RGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRL 474
L + Y+HSA I HRD+K SN+ ++ + K+ DFGL+R
Sbjct: 122 HVQFLIYQILRGLK--------YIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARH 170
Query: 475 GMTESSHISTAPQGTPGYLDPQYH-QYFHLSDKSDVYSFGVVLIEIIT 521
E + T Y P+ + H + D++S G ++ E++T
Sbjct: 171 TDDEMAGFV----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 214
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 99/228 (43%), Gaps = 33/228 (14%)
Query: 312 PFYPYKEIEKATSFFSEKHR----LGTGAYGTVYAG-KLHNDDWVAIKRFR--YRDTDSI 364
P + +E+ K E+++ +G+GAYG+V A VA+K+ ++
Sbjct: 6 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHA 65
Query: 365 DQVMNEIKLLSSVSHPNLLRLLGC-----CIEEGEPI-LVYEFM----PNGTLCQHLQRE 414
+ E++LL + H N++ LL +EE + LV M N CQ L +
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 125
Query: 415 RGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRL 474
L + Y+HSA I HRD+K SN+ ++ + K+ DFGL+R
Sbjct: 126 HVQFLIYQILRGLK--------YIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARH 174
Query: 475 GMTESSHISTAPQGTPGYLDPQYH-QYFHLSDKSDVYSFGVVLIEIIT 521
E + T Y P+ + H + D++S G ++ E++T
Sbjct: 175 TDDEMAGFV----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 86/197 (43%), Gaps = 10/197 (5%)
Query: 332 LGTGAYGTV-YAGKLHNDDWVAIKRFRYR---DTDSIDQVMNEIKLLSSVSHPNLLRLLG 387
LG G++ TV A +L AIK R + + V E ++S + HP ++L
Sbjct: 37 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 96
Query: 388 CCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIY 447
++ + + NG L +++ R+ GS YLH I
Sbjct: 97 TFQDDEKLYFGLSYAKNGELLKYI-RKIGS-FDETCTRFYTAEIVSALEYLHGK---GII 151
Query: 448 HRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHI-STAPQGTPGYLDPQYHQYFHLSDK 506
HRD+K NILL+ + ++ DFG +++ ES + + GT Y+ P+
Sbjct: 152 HRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKS 211
Query: 507 SDVYSFGVVLIEIITAL 523
SD+++ G ++ +++ L
Sbjct: 212 SDLWALGCIIYQLVAGL 228
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 99/228 (43%), Gaps = 33/228 (14%)
Query: 312 PFYPYKEIEKATSFFSEKHR----LGTGAYGTVYAG-KLHNDDWVAIKRFR--YRDTDSI 364
P + +E+ K E+++ +G+GAYG+V A VA+K+ ++
Sbjct: 6 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHA 65
Query: 365 DQVMNEIKLLSSVSHPNLLRLLGC-----CIEEGEPI-LVYEFM----PNGTLCQHLQRE 414
+ E++LL + H N++ LL +EE + LV M N CQ L +
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 125
Query: 415 RGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRL 474
L + Y+HSA I HRD+K SN+ ++ + K+ DFGL+R
Sbjct: 126 HVQFLIYQILRGLK--------YIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARH 174
Query: 475 GMTESSHISTAPQGTPGYLDPQYH-QYFHLSDKSDVYSFGVVLIEIIT 521
E + T Y P+ + H + D++S G ++ E++T
Sbjct: 175 TDDEMAGFV----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 99/228 (43%), Gaps = 33/228 (14%)
Query: 312 PFYPYKEIEKATSFFSEKHR----LGTGAYGTVYAG-KLHNDDWVAIKRFR--YRDTDSI 364
P + +E+ K E+++ +G+GAYG+V A VA+K+ ++
Sbjct: 8 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 67
Query: 365 DQVMNEIKLLSSVSHPNLLRLLGC-----CIEEGEPI-LVYEFM----PNGTLCQHLQRE 414
+ E++LL + H N++ LL +EE + LV M N CQ L +
Sbjct: 68 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 127
Query: 415 RGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRL 474
L + Y+HSA I HRD+K SN+ ++ + K+ DFGL+R
Sbjct: 128 HVQFLIYQILRGLK--------YIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARH 176
Query: 475 GMTESSHISTAPQGTPGYLDPQYH-QYFHLSDKSDVYSFGVVLIEIIT 521
E T T Y P+ + H + D++S G ++ E++T
Sbjct: 177 TDDE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 220
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 99/228 (43%), Gaps = 33/228 (14%)
Query: 312 PFYPYKEIEKATSFFSEKHR----LGTGAYGTVYAG-KLHNDDWVAIKRFR--YRDTDSI 364
P + +E+ K E+++ +G+GAYG+V A VA+K+ ++
Sbjct: 6 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 65
Query: 365 DQVMNEIKLLSSVSHPNLLRLLGC-----CIEEGEPI-LVYEFM----PNGTLCQHLQRE 414
+ E++LL + H N++ LL +EE + LV M N CQ L +
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 125
Query: 415 RGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRL 474
L + Y+HSA I HRD+K SN+ ++ + K+ DFGL+R
Sbjct: 126 HVQFLIYQILRGLK--------YIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARH 174
Query: 475 GMTESSHISTAPQGTPGYLDPQYH-QYFHLSDKSDVYSFGVVLIEIIT 521
E T T Y P+ + H + D++S G ++ E++T
Sbjct: 175 TDDE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 85/197 (43%), Gaps = 10/197 (5%)
Query: 332 LGTGAYGTV-YAGKLHNDDWVAIKRFRYR---DTDSIDQVMNEIKLLSSVSHPNLLRLLG 387
LG G++ TV A +L AIK R + + V E ++S + HP ++L
Sbjct: 17 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 76
Query: 388 CCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIY 447
++ + + NG L +++ R+ GS YLH I
Sbjct: 77 TFQDDEKLYFGLSYAKNGELLKYI-RKIGS-FDETCTRFYTAEIVSALEYLHGKG---II 131
Query: 448 HRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHI-STAPQGTPGYLDPQYHQYFHLSDK 506
HRD+K NILL+ + ++ DFG +++ ES + GT Y+ P+
Sbjct: 132 HRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKS 191
Query: 507 SDVYSFGVVLIEIITAL 523
SD+++ G ++ +++ L
Sbjct: 192 SDLWALGCIIYQLVAGL 208
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 85/197 (43%), Gaps = 10/197 (5%)
Query: 332 LGTGAYGTV-YAGKLHNDDWVAIKRFRYR---DTDSIDQVMNEIKLLSSVSHPNLLRLLG 387
LG G++ TV A +L AIK R + + V E ++S + HP ++L
Sbjct: 18 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 77
Query: 388 CCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIY 447
++ + + NG L +++ R+ GS YLH I
Sbjct: 78 TFQDDEKLYFGLSYAKNGELLKYI-RKIGS-FDETCTRFYTAEIVSALEYLHGKG---II 132
Query: 448 HRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHI-STAPQGTPGYLDPQYHQYFHLSDK 506
HRD+K NILL+ + ++ DFG +++ ES + GT Y+ P+
Sbjct: 133 HRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKS 192
Query: 507 SDVYSFGVVLIEIITAL 523
SD+++ G ++ +++ L
Sbjct: 193 SDLWALGCIIYQLVAGL 209
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 85/197 (43%), Gaps = 10/197 (5%)
Query: 332 LGTGAYGTV-YAGKLHNDDWVAIKRFRYR---DTDSIDQVMNEIKLLSSVSHPNLLRLLG 387
LG G++ TV A +L AIK R + + V E ++S + HP ++L
Sbjct: 15 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 74
Query: 388 CCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIY 447
++ + + NG L +++ R+ GS YLH I
Sbjct: 75 TFQDDEKLYFGLSYAKNGELLKYI-RKIGS-FDETCTRFYTAEIVSALEYLHGK---GII 129
Query: 448 HRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHI-STAPQGTPGYLDPQYHQYFHLSDK 506
HRD+K NILL+ + ++ DFG +++ ES + GT Y+ P+
Sbjct: 130 HRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKS 189
Query: 507 SDVYSFGVVLIEIITAL 523
SD+++ G ++ +++ L
Sbjct: 190 SDLWALGCIIYQLVAGL 206
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 99/228 (43%), Gaps = 33/228 (14%)
Query: 312 PFYPYKEIEKATSFFSEKHR----LGTGAYGTVYAG-KLHNDDWVAIKRFR--YRDTDSI 364
P + +E+ K E+++ +G+GAYG+V A VA+K+ ++
Sbjct: 12 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 71
Query: 365 DQVMNEIKLLSSVSHPNLLRLLGC-----CIEEGEPI-LVYEFM----PNGTLCQHLQRE 414
+ E++LL + H N++ LL +EE + LV M N CQ L +
Sbjct: 72 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 131
Query: 415 RGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRL 474
L + Y+HSA I HRD+K SN+ ++ + K+ DFGL+R
Sbjct: 132 HVQFLIYQILRGLK--------YIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARH 180
Query: 475 GMTESSHISTAPQGTPGYLDPQYH-QYFHLSDKSDVYSFGVVLIEIIT 521
E T T Y P+ + H + D++S G ++ E++T
Sbjct: 181 TDDE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 224
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 85/197 (43%), Gaps = 10/197 (5%)
Query: 332 LGTGAYGTV-YAGKLHNDDWVAIKRFRYR---DTDSIDQVMNEIKLLSSVSHPNLLRLLG 387
LG G++ TV A +L AIK R + + V E ++S + HP ++L
Sbjct: 16 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 75
Query: 388 CCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIY 447
++ + + NG L +++ R+ GS YLH I
Sbjct: 76 TFQDDEKLYFGLSYAKNGELLKYI-RKIGS-FDETCTRFYTAEIVSALEYLHGK---GII 130
Query: 448 HRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHI-STAPQGTPGYLDPQYHQYFHLSDK 506
HRD+K NILL+ + ++ DFG +++ ES + GT Y+ P+
Sbjct: 131 HRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKS 190
Query: 507 SDVYSFGVVLIEIITAL 523
SD+++ G ++ +++ L
Sbjct: 191 SDLWALGCIIYQLVAGL 207
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 99/228 (43%), Gaps = 33/228 (14%)
Query: 312 PFYPYKEIEKATSFFSEKHR----LGTGAYGTVYAG-KLHNDDWVAIKRFR--YRDTDSI 364
P + +E+ K E+++ +G+GAYG+V A VA+K+ ++
Sbjct: 29 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 88
Query: 365 DQVMNEIKLLSSVSHPNLLRLLGC-----CIEEGEPI-LVYEFM----PNGTLCQHLQRE 414
+ E++LL + H N++ LL +EE + LV M N CQ L +
Sbjct: 89 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 148
Query: 415 RGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRL 474
L + Y+HSA I HRD+K SN+ ++ + K+ DFGL+R
Sbjct: 149 HVQFLIYQILRGLK--------YIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR- 196
Query: 475 GMTESSHISTAPQGTPGYLDPQYH-QYFHLSDKSDVYSFGVVLIEIIT 521
+ T T Y P+ + H + D++S G ++ E++T
Sbjct: 197 ---HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 241
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 99/228 (43%), Gaps = 33/228 (14%)
Query: 312 PFYPYKEIEKATSFFSEKHR----LGTGAYGTVYAG-KLHNDDWVAIKRFR--YRDTDSI 364
P + +E+ K E+++ +G+GAYG+V A VA+K+ ++
Sbjct: 13 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 72
Query: 365 DQVMNEIKLLSSVSHPNLLRLLGC-----CIEEGEPI-LVYEFM----PNGTLCQHLQRE 414
+ E++LL + H N++ LL +EE + LV M N CQ L +
Sbjct: 73 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 132
Query: 415 RGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRL 474
L + Y+HSA I HRD+K SN+ ++ + K+ DFGL+R
Sbjct: 133 HVQFLIYQILRGLK--------YIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARH 181
Query: 475 GMTESSHISTAPQGTPGYLDPQYH-QYFHLSDKSDVYSFGVVLIEIIT 521
E T T Y P+ + H + D++S G ++ E++T
Sbjct: 182 TDDE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 225
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 99/228 (43%), Gaps = 33/228 (14%)
Query: 312 PFYPYKEIEKATSFFSEKHR----LGTGAYGTVYAG-KLHNDDWVAIKRFR--YRDTDSI 364
P + +E+ K E+++ +G+GAYG+V A VA+K+ ++
Sbjct: 25 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 84
Query: 365 DQVMNEIKLLSSVSHPNLLRLLGC-----CIEEGEPI-LVYEFM----PNGTLCQHLQRE 414
+ E++LL + H N++ LL +EE + LV M N CQ L +
Sbjct: 85 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 144
Query: 415 RGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRL 474
L + Y+HSA I HRD+K SN+ ++ + K+ DFGL+R
Sbjct: 145 HVQFLIYQILRGLK--------YIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARH 193
Query: 475 GMTESSHISTAPQGTPGYLDPQYH-QYFHLSDKSDVYSFGVVLIEIIT 521
E T T Y P+ + H + D++S G ++ E++T
Sbjct: 194 TDDE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 237
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 99/228 (43%), Gaps = 33/228 (14%)
Query: 312 PFYPYKEIEKATSFFSEKHR----LGTGAYGTVYAG-KLHNDDWVAIKRFR--YRDTDSI 364
P + +E+ K E+++ +G+GAYG+V A VA+K+ ++
Sbjct: 11 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 70
Query: 365 DQVMNEIKLLSSVSHPNLLRLLGC-----CIEEGEPI-LVYEFM----PNGTLCQHLQRE 414
+ E++LL + H N++ LL +EE + LV M N CQ L +
Sbjct: 71 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 130
Query: 415 RGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRL 474
L + Y+HSA I HRD+K SN+ ++ + K+ DFGL+R
Sbjct: 131 HVQFLIYQILRGLK--------YIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARH 179
Query: 475 GMTESSHISTAPQGTPGYLDPQYH-QYFHLSDKSDVYSFGVVLIEIIT 521
E T T Y P+ + H + D++S G ++ E++T
Sbjct: 180 TDDE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 223
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 99/228 (43%), Gaps = 33/228 (14%)
Query: 312 PFYPYKEIEKATSFFSEKHR----LGTGAYGTVYAG-KLHNDDWVAIKRFR--YRDTDSI 364
P + +E+ K E+++ +G+GAYG+V A VA+K+ ++
Sbjct: 5 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 64
Query: 365 DQVMNEIKLLSSVSHPNLLRLLGC-----CIEEGEPI-LVYEFM----PNGTLCQHLQRE 414
+ E++LL + H N++ LL +EE + LV M N CQ L +
Sbjct: 65 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 124
Query: 415 RGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRL 474
L + Y+HSA I HRD+K SN+ ++ + K+ DFGL+R
Sbjct: 125 HVQFLIYQILRGLK--------YIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARH 173
Query: 475 GMTESSHISTAPQGTPGYLDPQYH-QYFHLSDKSDVYSFGVVLIEIIT 521
E T T Y P+ + H + D++S G ++ E++T
Sbjct: 174 TDDE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 217
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 99/228 (43%), Gaps = 33/228 (14%)
Query: 312 PFYPYKEIEKATSFFSEKHR----LGTGAYGTVYAG-KLHNDDWVAIKRFR--YRDTDSI 364
P + +E+ K E+++ +G+GAYG+V A VA+K+ ++
Sbjct: 6 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 65
Query: 365 DQVMNEIKLLSSVSHPNLLRLLGC-----CIEEGEPI-LVYEFM----PNGTLCQHLQRE 414
+ E++LL + H N++ LL +EE + LV M N CQ L +
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 125
Query: 415 RGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRL 474
L + Y+HSA I HRD+K SN+ ++ + K+ DFGL+R
Sbjct: 126 HVQFLIYQILRGLK--------YIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARH 174
Query: 475 GMTESSHISTAPQGTPGYLDPQYH-QYFHLSDKSDVYSFGVVLIEIIT 521
E T T Y P+ + H + D++S G ++ E++T
Sbjct: 175 TDDE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 99/228 (43%), Gaps = 33/228 (14%)
Query: 312 PFYPYKEIEKATSFFSEKHR----LGTGAYGTVYAG-KLHNDDWVAIKRFR--YRDTDSI 364
P + +E+ K E+++ +G+GAYG+V A VA+K+ ++
Sbjct: 8 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 67
Query: 365 DQVMNEIKLLSSVSHPNLLRLLGC-----CIEEGEPI-LVYEFM----PNGTLCQHLQRE 414
+ E++LL + H N++ LL +EE + LV M N CQ L +
Sbjct: 68 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 127
Query: 415 RGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRL 474
L + Y+HSA I HRD+K SN+ ++ + K+ DFGL+R
Sbjct: 128 HVQFLIYQILRGLK--------YIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARH 176
Query: 475 GMTESSHISTAPQGTPGYLDPQYH-QYFHLSDKSDVYSFGVVLIEIIT 521
E T T Y P+ + H + D++S G ++ E++T
Sbjct: 177 TDDE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 220
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 99/228 (43%), Gaps = 33/228 (14%)
Query: 312 PFYPYKEIEKATSFFSEKHR----LGTGAYGTVYAG-KLHNDDWVAIKRFR--YRDTDSI 364
P + +E+ K E+++ +G+GAYG+V A VA+K+ ++
Sbjct: 2 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 61
Query: 365 DQVMNEIKLLSSVSHPNLLRLLGC-----CIEEGEPI-LVYEFM----PNGTLCQHLQRE 414
+ E++LL + H N++ LL +EE + LV M N CQ L +
Sbjct: 62 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 121
Query: 415 RGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRL 474
L + Y+HSA I HRD+K SN+ ++ + K+ DFGL+R
Sbjct: 122 HVQFLIYQILRGLK--------YIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARH 170
Query: 475 GMTESSHISTAPQGTPGYLDPQYH-QYFHLSDKSDVYSFGVVLIEIIT 521
E T T Y P+ + H + D++S G ++ E++T
Sbjct: 171 TDDE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 214
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 99/228 (43%), Gaps = 33/228 (14%)
Query: 312 PFYPYKEIEKATSFFSEKHR----LGTGAYGTVYAG-KLHNDDWVAIKRFR--YRDTDSI 364
P + +E+ K E+++ +G+GAYG+V A VA+K+ ++
Sbjct: 3 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 62
Query: 365 DQVMNEIKLLSSVSHPNLLRLLGC-----CIEEGEPI-LVYEFM----PNGTLCQHLQRE 414
+ E++LL + H N++ LL +EE + LV M N CQ L +
Sbjct: 63 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 122
Query: 415 RGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRL 474
L + Y+HSA I HRD+K SN+ ++ + K+ DFGL+R
Sbjct: 123 HVQFLIYQILRGLK--------YIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARH 171
Query: 475 GMTESSHISTAPQGTPGYLDPQYH-QYFHLSDKSDVYSFGVVLIEIIT 521
E T T Y P+ + H + D++S G ++ E++T
Sbjct: 172 TDDE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 215
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 99/228 (43%), Gaps = 33/228 (14%)
Query: 312 PFYPYKEIEKATSFFSEKHR----LGTGAYGTVYAG-KLHNDDWVAIKRFR--YRDTDSI 364
P + +E+ K E+++ +G+GAYG+V A VA+K+ ++
Sbjct: 6 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 65
Query: 365 DQVMNEIKLLSSVSHPNLLRLLGC-----CIEEGEPI-LVYEFM----PNGTLCQHLQRE 414
+ E++LL + H N++ LL +EE + LV M N CQ L +
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 125
Query: 415 RGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRL 474
L + Y+HSA I HRD+K SN+ ++ + K+ DFGL+R
Sbjct: 126 HVQFLIYQILRGLK--------YIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARH 174
Query: 475 GMTESSHISTAPQGTPGYLDPQYH-QYFHLSDKSDVYSFGVVLIEIIT 521
E T T Y P+ + H + D++S G ++ E++T
Sbjct: 175 TDDE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 99/228 (43%), Gaps = 33/228 (14%)
Query: 312 PFYPYKEIEKATSFFSEKHR----LGTGAYGTVYAG-KLHNDDWVAIKRFR--YRDTDSI 364
P + +E+ K E+++ +G+GAYG+V A VA+K+ ++
Sbjct: 11 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 70
Query: 365 DQVMNEIKLLSSVSHPNLLRLLGC-----CIEEGEPI-LVYEFM----PNGTLCQHLQRE 414
+ E++LL + H N++ LL +EE + LV M N CQ L +
Sbjct: 71 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 130
Query: 415 RGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRL 474
L + Y+HSA I HRD+K SN+ ++ + K+ DFGL+R
Sbjct: 131 HVQFLIYQILRGLK--------YIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARH 179
Query: 475 GMTESSHISTAPQGTPGYLDPQYH-QYFHLSDKSDVYSFGVVLIEIIT 521
E T T Y P+ + H + D++S G ++ E++T
Sbjct: 180 TDDE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 223
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 99/228 (43%), Gaps = 33/228 (14%)
Query: 312 PFYPYKEIEKATSFFSEKHR----LGTGAYGTVYAG-KLHNDDWVAIKRFR--YRDTDSI 364
P + +E+ K E+++ +G+GAYG+V A VA+K+ ++
Sbjct: 8 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 67
Query: 365 DQVMNEIKLLSSVSHPNLLRLLGC-----CIEEGEPI-LVYEFM----PNGTLCQHLQRE 414
+ E++LL + H N++ LL +EE + LV M N CQ L +
Sbjct: 68 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 127
Query: 415 RGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRL 474
L + Y+HSA I HRD+K SN+ ++ + K+ DFGL+R
Sbjct: 128 HVQFLIYQILRGLK--------YIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARH 176
Query: 475 GMTESSHISTAPQGTPGYLDPQYH-QYFHLSDKSDVYSFGVVLIEIIT 521
E T T Y P+ + H + D++S G ++ E++T
Sbjct: 177 TDDE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 220
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 86/214 (40%), Gaps = 32/214 (14%)
Query: 320 EKATSFFSEKHRLGTGAYGTV-----------YAGKLHNDDWVAIKRFRYRDTDS---ID 365
+K F+ LG+G + V YA K IK+ + R + +
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKF-------IKKRQSRASRRGVCRE 60
Query: 366 QVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXX 425
++ E+ +L V HPN++ L + +L+ E + G L L ++ L
Sbjct: 61 EIEREVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQK--ESLSEEEAT 118
Query: 426 XXXXXXXXXXXYLHSAMNPPIYHRDIKSSNI-LLDYNY---RSKVADFGLSRLGMTESSH 481
YLH+ I H D+K NI LLD N K+ DFGL+ E
Sbjct: 119 SFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH--EIEDGV 173
Query: 482 ISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVV 515
GTP ++ P+ Y L ++D++S GV+
Sbjct: 174 EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVI 207
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 99/228 (43%), Gaps = 33/228 (14%)
Query: 312 PFYPYKEIEKATSFFSEKHR----LGTGAYGTVYAG-KLHNDDWVAIKRFR--YRDTDSI 364
P + +E+ K E+++ +G+GAYG+V A VA+K+ ++
Sbjct: 3 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 62
Query: 365 DQVMNEIKLLSSVSHPNLLRLLGC-----CIEEGEPI-LVYEFM----PNGTLCQHLQRE 414
+ E++LL + H N++ LL +EE + LV M N CQ L +
Sbjct: 63 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 122
Query: 415 RGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRL 474
L + Y+HSA I HRD+K SN+ ++ + K+ DFGL+R
Sbjct: 123 HVQFLIYQILRGLK--------YIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARH 171
Query: 475 GMTESSHISTAPQGTPGYLDPQYH-QYFHLSDKSDVYSFGVVLIEIIT 521
E T T Y P+ + H + D++S G ++ E++T
Sbjct: 172 TDDE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 215
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 85/197 (43%), Gaps = 10/197 (5%)
Query: 332 LGTGAYGTV-YAGKLHNDDWVAIKRFRYR---DTDSIDQVMNEIKLLSSVSHPNLLRLLG 387
LG G++ TV A +L AIK R + + V E ++S + HP ++L
Sbjct: 22 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 81
Query: 388 CCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIY 447
++ + + NG L +++ R+ GS YLH I
Sbjct: 82 TFQDDEKLYFGLSYAKNGELLKYI-RKIGS-FDETCTRFYTAEIVSALEYLHGK---GII 136
Query: 448 HRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHI-STAPQGTPGYLDPQYHQYFHLSDK 506
HRD+K NILL+ + ++ DFG +++ ES + GT Y+ P+
Sbjct: 137 HRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKS 196
Query: 507 SDVYSFGVVLIEIITAL 523
SD+++ G ++ +++ L
Sbjct: 197 SDLWALGCIIYQLVAGL 213
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 89/199 (44%), Gaps = 21/199 (10%)
Query: 332 LGTGAYGTV---YAGKLHNDDWVAIKRFR--YRDTDSIDQVMNEIKLLSSVSHPNLLRLL 386
+G+GA G V Y L + VAIK+ +++ + E+ L+ V+H N++ LL
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 387 GC-----CIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSA 441
+EE + + + + + L Q +Q E L +LHSA
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDANLSQVIQME----LDHERMSYLLYQMLCGIKHLHSA 145
Query: 442 MNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYF 501
I HRD+K SNI++ + K+ DFGL+R T S + T T Y P+
Sbjct: 146 ---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMMTPYVVTRYYRAPEVILGM 200
Query: 502 HLSDKSDVYSFGVVLIEII 520
+ D++S G ++ E+I
Sbjct: 201 GYKENVDIWSVGCIMGEMI 219
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 109/247 (44%), Gaps = 42/247 (17%)
Query: 302 LCQAAGNSSVPF---------YPYKEIEKATSFFSEKHR----LGTGAYGTVYAG-KLHN 347
L + AG+++ PF + +E+ K E+++ +G+GAYG+V + + +
Sbjct: 16 LYKKAGSAAAPFTMSHKERPTFYRQELNKTIWEVPERYQTLSPVGSGAYGSVCSSYDVKS 75
Query: 348 DDWVAIKRFR--YRDTDSIDQVMNEIKLLSSVSHPNLLRLL-----GCCIEEGEPI-LVY 399
+A+K+ ++ + E++LL + H N++ LL +EE + LV
Sbjct: 76 GLKIAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPATSLEEFNDVYLVT 135
Query: 400 EFM----PNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSN 455
M N CQ L + L + Y+HSA I HRD+K SN
Sbjct: 136 HLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK--------YIHSA---DIIHRDLKPSN 184
Query: 456 ILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYH-QYFHLSDKSDVYSFGV 514
+ ++ + K+ DFGL+R E T T Y P+ + H + D++S G
Sbjct: 185 LAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLNWMHYNMTVDIWSVGC 240
Query: 515 VLIEIIT 521
++ E++T
Sbjct: 241 IMAELLT 247
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 98/228 (42%), Gaps = 33/228 (14%)
Query: 312 PFYPYKEIEKATSFFSEKHR----LGTGAYGTVYAG-KLHNDDWVAIKRFR--YRDTDSI 364
P + +E+ K E+++ +G+GAYG+V A VA+K+ ++
Sbjct: 26 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHA 85
Query: 365 DQVMNEIKLLSSVSHPNLLRLLGC-----CIEEGEPI-LVYEFM----PNGTLCQHLQRE 414
+ E++LL + H N++ LL +EE + LV M N CQ L +
Sbjct: 86 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 145
Query: 415 RGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRL 474
L + Y+HSA I HRD+K SN+ ++ + K+ DFGL+R
Sbjct: 146 HVQFLIYQILRGLK--------YIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARH 194
Query: 475 GMTESSHISTAPQGTPGYLDPQYH-QYFHLSDKSDVYSFGVVLIEIIT 521
E T Y P+ + H + D++S G ++ E++T
Sbjct: 195 TDDE----MXGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 238
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 85/197 (43%), Gaps = 10/197 (5%)
Query: 332 LGTGAYGTV-YAGKLHNDDWVAIKRFRYR---DTDSIDQVMNEIKLLSSVSHPNLLRLLG 387
LG G++ TV A +L AIK R + + V E ++S + HP ++L
Sbjct: 37 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 96
Query: 388 CCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIY 447
++ + + NG L +++ R+ GS YLH I
Sbjct: 97 TFQDDEKLYFGLSYAKNGELLKYI-RKIGS-FDETCTRFYTAEIVSALEYLHGK---GII 151
Query: 448 HRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHI-STAPQGTPGYLDPQYHQYFHLSDK 506
HRD+K NILL+ + ++ DFG +++ ES + GT Y+ P+
Sbjct: 152 HRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKS 211
Query: 507 SDVYSFGVVLIEIITAL 523
SD+++ G ++ +++ L
Sbjct: 212 SDLWALGCIIYQLVAGL 228
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 74/167 (44%), Gaps = 29/167 (17%)
Query: 332 LGTGAYGTVYAGKLHNDDWVAI------KRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRL 385
+G G++G V+ KL D VAI KRF+ R E++++ V HPN++ L
Sbjct: 48 IGNGSFGVVFQAKLVESDEVAIKKVLQDKRFKNR----------ELQIMRIVKHPNVVDL 97
Query: 386 LGCCIEEGEPI------LVYEFMPNGTL--CQHLQRERGSGLPWXXXXXXXXXXXXXXXY 437
G+ LV E++P +H + + + +P Y
Sbjct: 98 KAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQT-MPMLLIKLYMYQLLRSLAY 156
Query: 438 LHSAMNPPIYHRDIKSSNILLD-YNYRSKVADFGLSRLGMTESSHIS 483
+HS I HRDIK N+LLD + K+ DFG +++ + ++S
Sbjct: 157 IHSIG---ICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVS 200
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 99/216 (45%), Gaps = 41/216 (18%)
Query: 326 FSEKHRLGTGAYGTVYAGKL-HNDDWVAIKRF----RYRDTDSIDQVMNEIKLLSSVSHP 380
+++ +G G++G VY KL + + VAIK+ R+++ E++++ + H
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN--------RELQIMRKLDHC 107
Query: 381 NLLRLLGCCIEEGEPI------LVYEFMPNGT--LCQHLQRERGSGLPWXXXXXXXXXXX 432
N++RL GE LV +++P + +H R + + LP
Sbjct: 108 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT-LPVIYVKLYMYQLF 166
Query: 433 XXXXYLHSAMNPPIYHRDIKSSNILLDYNYRS-KVADFGLSRLGMTESSHISTAPQGTPG 491
Y+HS I HRDIK N+LLD + K+ DFG ++ + ++S
Sbjct: 167 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS-------- 215
Query: 492 YLDPQYHQ----YFHLSDKS---DVYSFGVVLIEII 520
Y+ +Y++ F +D + DV+S G VL E++
Sbjct: 216 YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 251
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 99/228 (43%), Gaps = 33/228 (14%)
Query: 312 PFYPYKEIEKATSFFSEKHR----LGTGAYGTVYAG-KLHNDDWVAIKRFR--YRDTDSI 364
P + +E+ K E+++ +G+GAYG+V A VA+K+ ++
Sbjct: 12 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 71
Query: 365 DQVMNEIKLLSSVSHPNLLRLLGC-----CIEEGEPI-LVYEFM----PNGTLCQHLQRE 414
+ E++LL + H N++ LL +EE + LV M N CQ L +
Sbjct: 72 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 131
Query: 415 RGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRL 474
L + Y+HSA I HRD+K SN+ ++ + K+ DFGL+R
Sbjct: 132 HVQFLIYQILRGLK--------YIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARH 180
Query: 475 GMTESSHISTAPQGTPGYLDPQYH-QYFHLSDKSDVYSFGVVLIEIIT 521
E T T Y P+ + H + D++S G ++ E++T
Sbjct: 181 TDDE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 224
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 99/216 (45%), Gaps = 41/216 (18%)
Query: 326 FSEKHRLGTGAYGTVYAGKL-HNDDWVAIKRF----RYRDTDSIDQVMNEIKLLSSVSHP 380
+++ +G G++G VY KL + + VAIK+ R+++ E++++ + H
Sbjct: 60 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN--------RELQIMRKLDHC 111
Query: 381 NLLRLLGCCIEEGEPI------LVYEFMPNGT--LCQHLQRERGSGLPWXXXXXXXXXXX 432
N++RL GE LV +++P + +H R + + LP
Sbjct: 112 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT-LPVIYVKLYMYQLF 170
Query: 433 XXXXYLHSAMNPPIYHRDIKSSNILLDYNYRS-KVADFGLSRLGMTESSHISTAPQGTPG 491
Y+HS I HRDIK N+LLD + K+ DFG ++ + ++S
Sbjct: 171 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS-------- 219
Query: 492 YLDPQYHQ----YFHLSDKS---DVYSFGVVLIEII 520
Y+ +Y++ F +D + DV+S G VL E++
Sbjct: 220 YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 255
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 99/216 (45%), Gaps = 41/216 (18%)
Query: 326 FSEKHRLGTGAYGTVYAGKL-HNDDWVAIKRF----RYRDTDSIDQVMNEIKLLSSVSHP 380
+++ +G G++G VY KL + + VAIK+ R+++ E++++ + H
Sbjct: 58 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN--------RELQIMRKLDHC 109
Query: 381 NLLRLLGCCIEEGEPI------LVYEFMPNGT--LCQHLQRERGSGLPWXXXXXXXXXXX 432
N++RL GE LV +++P + +H R + + LP
Sbjct: 110 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT-LPVIYVKLYMYQLF 168
Query: 433 XXXXYLHSAMNPPIYHRDIKSSNILLDYNYRS-KVADFGLSRLGMTESSHISTAPQGTPG 491
Y+HS I HRDIK N+LLD + K+ DFG ++ + ++S
Sbjct: 169 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS-------- 217
Query: 492 YLDPQYHQ----YFHLSDKS---DVYSFGVVLIEII 520
Y+ +Y++ F +D + DV+S G VL E++
Sbjct: 218 YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 253
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 99/216 (45%), Gaps = 41/216 (18%)
Query: 326 FSEKHRLGTGAYGTVYAGKL-HNDDWVAIKRF----RYRDTDSIDQVMNEIKLLSSVSHP 380
+++ +G G++G VY KL + + VAIK+ R+++ E++++ + H
Sbjct: 50 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN--------RELQIMRKLDHC 101
Query: 381 NLLRLLGCCIEEGEPI------LVYEFMPNGT--LCQHLQRERGSGLPWXXXXXXXXXXX 432
N++RL GE LV +++P + +H R + + LP
Sbjct: 102 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT-LPVIYVKLYMYQLF 160
Query: 433 XXXXYLHSAMNPPIYHRDIKSSNILLDYNYRS-KVADFGLSRLGMTESSHISTAPQGTPG 491
Y+HS I HRDIK N+LLD + K+ DFG ++ + ++S
Sbjct: 161 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS-------- 209
Query: 492 YLDPQYHQ----YFHLSDKS---DVYSFGVVLIEII 520
Y+ +Y++ F +D + DV+S G VL E++
Sbjct: 210 YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 245
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 99/216 (45%), Gaps = 41/216 (18%)
Query: 326 FSEKHRLGTGAYGTVYAGKL-HNDDWVAIKRF----RYRDTDSIDQVMNEIKLLSSVSHP 380
+++ +G G++G VY KL + + VAIK+ R+++ E++++ + H
Sbjct: 101 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN--------RELQIMRKLDHC 152
Query: 381 NLLRLLGCCIEEGEPI------LVYEFMPNGT--LCQHLQRERGSGLPWXXXXXXXXXXX 432
N++RL GE LV +++P + +H R + + LP
Sbjct: 153 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT-LPVIYVKLYMYQLF 211
Query: 433 XXXXYLHSAMNPPIYHRDIKSSNILLDYNYRS-KVADFGLSRLGMTESSHISTAPQGTPG 491
Y+HS I HRDIK N+LLD + K+ DFG ++ + ++S
Sbjct: 212 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS-------- 260
Query: 492 YLDPQYHQ----YFHLSDKS---DVYSFGVVLIEII 520
Y+ +Y++ F +D + DV+S G VL E++
Sbjct: 261 YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 296
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 85/183 (46%), Gaps = 28/183 (15%)
Query: 351 VAIKRFR--YRDTDSIDQVMNEIKLLSSVSHPNLLRLLGC-----CIEEGEPI-LVYEFM 402
VA+K+ +++ + E+ LL V+H N++ LL +EE + + LV E M
Sbjct: 50 VAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 109
Query: 403 PNGTLCQ----HLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILL 458
+ LCQ L ER S L + +LHSA I HRD+K SNI++
Sbjct: 110 -DANLCQVIHMELDHERMSYLLYQMLCGIK--------HLHSA---GIIHRDLKPSNIVV 157
Query: 459 DYNYRSKVADFGLSRLGMTESSHISTAPQ-GTPGYLDPQYHQYFHLSDKSDVYSFGVVLI 517
+ K+ DFGL+R T S++ P T Y P+ + D++S G ++
Sbjct: 158 KSDCTLKILDFGLAR---TASTNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMG 214
Query: 518 EII 520
E++
Sbjct: 215 ELV 217
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 90/219 (41%), Gaps = 33/219 (15%)
Query: 315 PYKEIEKATSFFSEKHRLGTGAYGTV-----------YAGKLHNDDWVAIKRFRYRDTD- 362
P+K+ +K F+ LG+G + V YA K IK+ + R +
Sbjct: 4 PFKQ-QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKF-------IKKRQSRASRR 55
Query: 363 --SIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLP 420
S +++ E+ +L V H N++ L + +L+ E + G L L ++ L
Sbjct: 56 GVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQK--ESLS 113
Query: 421 WXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNI-LLDYNY---RSKVADFGLSRLGM 476
YLH+ I H D+K NI LLD N K+ DFGL+
Sbjct: 114 EEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH--E 168
Query: 477 TESSHISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVV 515
E GTP ++ P+ Y L ++D++S GV+
Sbjct: 169 IEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVI 207
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 90/219 (41%), Gaps = 33/219 (15%)
Query: 315 PYKEIEKATSFFSEKHRLGTGAYGTV-----------YAGKLHNDDWVAIKRFRYRDTD- 362
P+K+ +K F+ LG+G + V YA K IK+ + R +
Sbjct: 4 PFKQ-QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKF-------IKKRQSRASRR 55
Query: 363 --SIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLP 420
S +++ E+ +L V H N++ L + +L+ E + G L L ++ L
Sbjct: 56 GVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQK--ESLS 113
Query: 421 WXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNI-LLDYNY---RSKVADFGLSRLGM 476
YLH+ I H D+K NI LLD N K+ DFGL+
Sbjct: 114 EEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH--E 168
Query: 477 TESSHISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVV 515
E GTP ++ P+ Y L ++D++S GV+
Sbjct: 169 IEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVI 207
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 97/227 (42%), Gaps = 38/227 (16%)
Query: 315 PYKEIEKATSFFSEKHRLGTGAYGTVYAGKLHNDDW-VAIKRF---RYRDTDSI---DQV 367
P KE E S + LG+G +G+VY+G +D+ VAIK R D + +V
Sbjct: 27 PGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV 86
Query: 368 MNEIKLLSSVS--HPNLLRLLG---------CCIEEGEPIL-VYEFMPNGTLCQHLQRER 415
E+ LL VS ++RLL +E EP+ +++F+ T LQ E
Sbjct: 87 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI---TERGALQEEL 143
Query: 416 GSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNY-RSKVADFGLSRL 474
W + N + HRDIK NIL+D N K+ DFG
Sbjct: 144 ARSFFWQVLEA-----------VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG---S 189
Query: 475 GMTESSHISTAPQGTPGYLDPQYHQYFHLSDKS-DVYSFGVVLIEII 520
G + T GT Y P++ +Y +S V+S G++L +++
Sbjct: 190 GALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV 236
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 97/227 (42%), Gaps = 38/227 (16%)
Query: 315 PYKEIEKATSFFSEKHRLGTGAYGTVYAGKLHNDDW-VAIKRF---RYRDTDSI---DQV 367
P KE E S + LG+G +G+VY+G +D+ VAIK R D + +V
Sbjct: 28 PGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV 87
Query: 368 MNEIKLLSSVS--HPNLLRLLG---------CCIEEGEPIL-VYEFMPNGTLCQHLQRER 415
E+ LL VS ++RLL +E EP+ +++F+ T LQ E
Sbjct: 88 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI---TERGALQEEL 144
Query: 416 GSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNY-RSKVADFGLSRL 474
W + N + HRDIK NIL+D N K+ DFG
Sbjct: 145 ARSFFWQVLEA-----------VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG---S 190
Query: 475 GMTESSHISTAPQGTPGYLDPQYHQYFHLSDKS-DVYSFGVVLIEII 520
G + T GT Y P++ +Y +S V+S G++L +++
Sbjct: 191 GALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV 237
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 95/216 (43%), Gaps = 41/216 (18%)
Query: 326 FSEKHRLGTGAYGTVYAGKL-HNDDWVAIKRF----RYRDTDSIDQVMNEIKLLSSVSHP 380
+++ +G G++G VY KL + + VAIK+ R+++ E++++ + H
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN--------RELQIMRKLDHC 107
Query: 381 NLLRLLGCCIEEGEPI------LVYEFMPNGT--LCQHLQRERGSGLPWXXXXXXXXXXX 432
N++RL GE LV +++P + +H R + + LP
Sbjct: 108 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT-LPVIYVKLYMYQLF 166
Query: 433 XXXXYLHSAMNPPIYHRDIKSSNILLDYNYRS-KVADFGLSRLGMTESSHIST------- 484
Y+HS I HRDIK N+LLD + K+ DFG ++ + ++S
Sbjct: 167 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYR 223
Query: 485 APQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEII 520
AP+ G D + DV+S G VL E++
Sbjct: 224 APELIFGATD--------YTSSIDVWSAGCVLAELL 251
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 97/227 (42%), Gaps = 38/227 (16%)
Query: 315 PYKEIEKATSFFSEKHRLGTGAYGTVYAGKLHNDDW-VAIKRF---RYRDTDSI---DQV 367
P KE E S + LG+G +G+VY+G +D+ VAIK R D + +V
Sbjct: 28 PGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV 87
Query: 368 MNEIKLLSSVS--HPNLLRLLG---------CCIEEGEPIL-VYEFMPNGTLCQHLQRER 415
E+ LL VS ++RLL +E EP+ +++F+ T LQ E
Sbjct: 88 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI---TERGALQEEL 144
Query: 416 GSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNY-RSKVADFGLSRL 474
W + N + HRDIK NIL+D N K+ DFG
Sbjct: 145 ARSFFWQVLEA-----------VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG---S 190
Query: 475 GMTESSHISTAPQGTPGYLDPQYHQYFHLSDKS-DVYSFGVVLIEII 520
G + T GT Y P++ +Y +S V+S G++L +++
Sbjct: 191 GALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV 237
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 97/227 (42%), Gaps = 38/227 (16%)
Query: 315 PYKEIEKATSFFSEKHRLGTGAYGTVYAGKLHNDDW-VAIKRF---RYRDTDSI---DQV 367
P KE E S + LG+G +G+VY+G +D+ VAIK R D + +V
Sbjct: 27 PGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV 86
Query: 368 MNEIKLLSSVS--HPNLLRLLG---------CCIEEGEPIL-VYEFMPNGTLCQHLQRER 415
E+ LL VS ++RLL +E EP+ +++F+ T LQ E
Sbjct: 87 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI---TERGALQEEL 143
Query: 416 GSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNY-RSKVADFGLSRL 474
W + N + HRDIK NIL+D N K+ DFG
Sbjct: 144 ARSFFWQVLEA-----------VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG---S 189
Query: 475 GMTESSHISTAPQGTPGYLDPQYHQYFHLSDKS-DVYSFGVVLIEII 520
G + T GT Y P++ +Y +S V+S G++L +++
Sbjct: 190 GALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV 236
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 89/205 (43%), Gaps = 33/205 (16%)
Query: 332 LGTGAYGTV---YAGKLHNDDWVAIKRFR--YRDTDSIDQVMNEIKLLSSVSHPNLLRLL 386
+G+GAYG+V Y +L VA+K+ ++ + E++LL + H N++ LL
Sbjct: 36 VGSGAYGSVCSAYDARLRQK--VAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 93
Query: 387 -----GCCIEE-GEPILVYEFM----PNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXX 436
IE+ E LV M N Q L E L +
Sbjct: 94 DVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQFLVYQLLRGLK-------- 145
Query: 437 YLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQ 496
Y+HSA I HRD+K SN+ ++ + ++ DFGL+R E T T Y P+
Sbjct: 146 YIHSA---GIIHRDLKPSNVAVNEDSELRILDFGLARQADEE----MTGYVATRWYRAPE 198
Query: 497 YH-QYFHLSDKSDVYSFGVVLIEII 520
+ H + D++S G ++ E++
Sbjct: 199 IMLNWMHYNQTVDIWSVGCIMAELL 223
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 95/227 (41%), Gaps = 38/227 (16%)
Query: 315 PYKEIEKATSFFSEKHRLGTGAYGTVYAGKLHNDDW-VAIKRFRYRDTDSIDQVMN---- 369
P KE E S + LG+G +G+VY+G +D+ VAIK ++ N
Sbjct: 28 PGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV 87
Query: 370 --EIKLLSSVS--HPNLLRLLG---------CCIEEGEPIL-VYEFMPNGTLCQHLQRER 415
E+ LL VS ++RLL +E EP+ +++F+ T LQ E
Sbjct: 88 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI---TERGALQEEL 144
Query: 416 GSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNY-RSKVADFGLSRL 474
W + N + HRDIK NIL+D N K+ DFG
Sbjct: 145 ARSFFWQVLEA-----------VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG---S 190
Query: 475 GMTESSHISTAPQGTPGYLDPQYHQYFHLSDKS-DVYSFGVVLIEII 520
G + T GT Y P++ +Y +S V+S G++L +++
Sbjct: 191 GALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV 237
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 83/200 (41%), Gaps = 30/200 (15%)
Query: 332 LGTGAYGTV-----------YAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHP 380
+G GA+ V YA K+ N K+ RD +++ E ++ + H
Sbjct: 12 IGKGAFSVVRRCVKLCTGHEYAAKIIN-----TKKLSARDHQKLER---EARICRLLKHS 63
Query: 381 NLLRLLGCCIEEGEPILVYEFMPNGTLCQHL-QRERGSGLPWXXXXXXXXXXXXXXXYLH 439
N++RL EEG LV++ + G L + + RE S LH
Sbjct: 64 NIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYS-----EADASHCIQQILEAVLH 118
Query: 440 SAMNPPIYHRDIKSSNILLDYNYRS---KVADFGLSRLGMTESSHISTAPQGTPGYLDPQ 496
+ HRD+K N+LL + K+ADFGL+ + + GTPGYL P+
Sbjct: 119 -CHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLA-IEVQGDQQAWFGFAGTPGYLSPE 176
Query: 497 YHQYFHLSDKSDVYSFGVVL 516
+ D+++ GV+L
Sbjct: 177 VLRKEAYGKPVDIWACGVIL 196
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 95/227 (41%), Gaps = 38/227 (16%)
Query: 315 PYKEIEKATSFFSEKHRLGTGAYGTVYAGKLHNDDW-VAIKRFRYRDTDSIDQVMN---- 369
P KE E S + LG+G +G+VY+G +D+ VAIK ++ N
Sbjct: 42 PGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV 101
Query: 370 --EIKLLSSVS--HPNLLRLLG---------CCIEEGEPIL-VYEFMPNGTLCQHLQRER 415
E+ LL VS ++RLL +E EP+ +++F+ T LQ E
Sbjct: 102 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI---TERGALQEEL 158
Query: 416 GSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNY-RSKVADFGLSRL 474
W + N + HRDIK NIL+D N K+ DFG
Sbjct: 159 ARSFFWQVLEA-----------VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG---S 204
Query: 475 GMTESSHISTAPQGTPGYLDPQYHQYFHLSDKS-DVYSFGVVLIEII 520
G + T GT Y P++ +Y +S V+S G++L +++
Sbjct: 205 GALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV 251
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 99/216 (45%), Gaps = 41/216 (18%)
Query: 326 FSEKHRLGTGAYGTVYAGKL-HNDDWVAIKRF----RYRDTDSIDQVMNEIKLLSSVSHP 380
+++ +G G++G VY KL + + VAIK+ R+++ E++++ + H
Sbjct: 27 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN--------RELQIMRKLDHC 78
Query: 381 NLLRLLGCCIEEGEPI------LVYEFMPNGT--LCQHLQRERGSGLPWXXXXXXXXXXX 432
N++RL GE LV +++P + +H R + + LP
Sbjct: 79 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT-LPVIYVKLYMYQLF 137
Query: 433 XXXXYLHSAMNPPIYHRDIKSSNILLDYNYRS-KVADFGLSRLGMTESSHISTAPQGTPG 491
Y+HS I HRDIK N+LLD + K+ DFG ++ + ++S
Sbjct: 138 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS-------- 186
Query: 492 YLDPQYHQ----YFHLSDKS---DVYSFGVVLIEII 520
Y+ +Y++ F +D + DV+S G VL E++
Sbjct: 187 YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 222
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 101/223 (45%), Gaps = 37/223 (16%)
Query: 319 IEKATSFFSEKHR------LGTGAYGTVYAG---KLHNDDWVAIKRFR--YRDTDSIDQV 367
+E A S F+ R +G+GA G V A L + VA+K+ +++ +
Sbjct: 13 VEVADSTFTVLKRYQQLKPIGSGAQGIVCAAFDTVLGIN--VAVKKLSRPFQNQTHAKRA 70
Query: 368 MNEIKLLSSVSHPNLLRLLGC-----CIEEGEPI-LVYEFMPNGTLCQ----HLQRERGS 417
E+ LL V+H N++ LL +EE + + LV E M + LCQ L ER S
Sbjct: 71 YRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIHMELDHERMS 129
Query: 418 GLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMT 477
L + +LHSA I HRD+K SNI++ + K+ DFGL+R T
Sbjct: 130 YLLYQMLCGIK--------HLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTACT 178
Query: 478 ESSHISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEII 520
+ + T T Y P+ + D++S G ++ E++
Sbjct: 179 --NFMMTPYVVTRYYRAPEVILGMGYAANVDIWSVGCIMGELV 219
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 90/219 (41%), Gaps = 33/219 (15%)
Query: 315 PYKEIEKATSFFSEKHRLGTGAYGTV-----------YAGKLHNDDWVAIKRFRYRDTD- 362
P+K+ +K F+ LG+G + V YA K IK+ + R +
Sbjct: 4 PFKQ-QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKF-------IKKRQSRASRR 55
Query: 363 --SIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLP 420
S +++ E+ +L V H N++ L + +L+ E + G L L ++ L
Sbjct: 56 GVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQK--ESLS 113
Query: 421 WXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNI-LLDYNY---RSKVADFGLSRLGM 476
YLH+ I H D+K NI LLD N K+ DFGL+
Sbjct: 114 EEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH--E 168
Query: 477 TESSHISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVV 515
E GTP ++ P+ Y L ++D++S GV+
Sbjct: 169 IEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVI 207
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 95/227 (41%), Gaps = 38/227 (16%)
Query: 315 PYKEIEKATSFFSEKHRLGTGAYGTVYAGKLHNDDW-VAIKRFRYRDTDSIDQVMN---- 369
P KE E S + LG+G +G+VY+G +D+ VAIK ++ N
Sbjct: 27 PGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV 86
Query: 370 --EIKLLSSVS--HPNLLRLLG---------CCIEEGEPIL-VYEFMPNGTLCQHLQRER 415
E+ LL VS ++RLL +E EP+ +++F+ T LQ E
Sbjct: 87 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI---TERGALQEEL 143
Query: 416 GSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNY-RSKVADFGLSRL 474
W + N + HRDIK NIL+D N K+ DFG
Sbjct: 144 ARSFFWQVLEA-----------VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG---S 189
Query: 475 GMTESSHISTAPQGTPGYLDPQYHQYFHLSDKS-DVYSFGVVLIEII 520
G + T GT Y P++ +Y +S V+S G++L +++
Sbjct: 190 GALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV 236
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 95/227 (41%), Gaps = 38/227 (16%)
Query: 315 PYKEIEKATSFFSEKHRLGTGAYGTVYAGKLHNDDW-VAIKRFRYRDTDSIDQVMN---- 369
P KE E S + LG+G +G+VY+G +D+ VAIK ++ N
Sbjct: 15 PGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV 74
Query: 370 --EIKLLSSVS--HPNLLRLLG---------CCIEEGEPIL-VYEFMPNGTLCQHLQRER 415
E+ LL VS ++RLL +E EP+ +++F+ T LQ E
Sbjct: 75 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI---TERGALQEEL 131
Query: 416 GSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNY-RSKVADFGLSRL 474
W + N + HRDIK NIL+D N K+ DFG
Sbjct: 132 ARSFFWQVLEA-----------VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG---S 177
Query: 475 GMTESSHISTAPQGTPGYLDPQYHQYFHLSDKS-DVYSFGVVLIEII 520
G + T GT Y P++ +Y +S V+S G++L +++
Sbjct: 178 GALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV 224
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 95/227 (41%), Gaps = 38/227 (16%)
Query: 315 PYKEIEKATSFFSEKHRLGTGAYGTVYAGKLHNDDW-VAIKRFRYRDTDSIDQVMN---- 369
P KE E S + LG+G +G+VY+G +D+ VAIK ++ N
Sbjct: 15 PGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV 74
Query: 370 --EIKLLSSVS--HPNLLRLLG---------CCIEEGEPIL-VYEFMPNGTLCQHLQRER 415
E+ LL VS ++RLL +E EP+ +++F+ T LQ E
Sbjct: 75 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI---TERGALQEEL 131
Query: 416 GSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNY-RSKVADFGLSRL 474
W + N + HRDIK NIL+D N K+ DFG
Sbjct: 132 ARSFFWQVLEA-----------VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG---S 177
Query: 475 GMTESSHISTAPQGTPGYLDPQYHQYFHLSDKS-DVYSFGVVLIEII 520
G + T GT Y P++ +Y +S V+S G++L +++
Sbjct: 178 GALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV 224
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 97/227 (42%), Gaps = 38/227 (16%)
Query: 315 PYKEIEKATSFFSEKHRLGTGAYGTVYAGKLHNDDW-VAIKRF---RYRDTDSI---DQV 367
P KE E S + LG+G +G+VY+G +D+ VAIK R D + +V
Sbjct: 42 PGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV 101
Query: 368 MNEIKLLSSVS--HPNLLRLLG---------CCIEEGEPIL-VYEFMPNGTLCQHLQRER 415
E+ LL VS ++RLL +E EP+ +++F+ T LQ E
Sbjct: 102 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI---TERGALQEEL 158
Query: 416 GSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNY-RSKVADFGLSRL 474
W + N + HRDIK NIL+D N K+ DFG
Sbjct: 159 ARSFFWQVLEA-----------VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG---S 204
Query: 475 GMTESSHISTAPQGTPGYLDPQYHQYFHLSDKS-DVYSFGVVLIEII 520
G + T GT Y P++ +Y +S V+S G++L +++
Sbjct: 205 GALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV 251
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 95/227 (41%), Gaps = 38/227 (16%)
Query: 315 PYKEIEKATSFFSEKHRLGTGAYGTVYAGKLHNDDW-VAIKRFRYRDTDSIDQVMN---- 369
P KE E S + LG+G +G+VY+G +D+ VAIK ++ N
Sbjct: 47 PGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV 106
Query: 370 --EIKLLSSVS--HPNLLRLLG---------CCIEEGEPIL-VYEFMPNGTLCQHLQRER 415
E+ LL VS ++RLL +E EP+ +++F+ T LQ E
Sbjct: 107 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI---TERGALQEEL 163
Query: 416 GSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNY-RSKVADFGLSRL 474
W + N + HRDIK NIL+D N K+ DFG
Sbjct: 164 ARSFFWQVLEA-----------VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG---S 209
Query: 475 GMTESSHISTAPQGTPGYLDPQYHQYFHLSDKS-DVYSFGVVLIEII 520
G + T GT Y P++ +Y +S V+S G++L +++
Sbjct: 210 GALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV 256
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 90/219 (41%), Gaps = 33/219 (15%)
Query: 315 PYKEIEKATSFFSEKHRLGTGAYGTV-----------YAGKLHNDDWVAIKRFRYRDTD- 362
P+K+ +K F+ LG+G + V YA K IK+ + R +
Sbjct: 4 PFKQ-QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKF-------IKKRQSRASRR 55
Query: 363 --SIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLP 420
S +++ E+ +L V H N++ L + +L+ E + G L L ++ L
Sbjct: 56 GVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQK--ESLS 113
Query: 421 WXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNI-LLDYNY---RSKVADFGLSRLGM 476
YLH+ I H D+K NI LLD N K+ DFGL+
Sbjct: 114 EEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH--E 168
Query: 477 TESSHISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVV 515
E GTP ++ P+ Y L ++D++S GV+
Sbjct: 169 IEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVI 207
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 95/227 (41%), Gaps = 38/227 (16%)
Query: 315 PYKEIEKATSFFSEKHRLGTGAYGTVYAGKLHNDDW-VAIKRFRYRDTDSIDQVMN---- 369
P KE E S + LG+G +G+VY+G +D+ VAIK ++ N
Sbjct: 28 PGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV 87
Query: 370 --EIKLLSSVS--HPNLLRLLG---------CCIEEGEPIL-VYEFMPNGTLCQHLQRER 415
E+ LL VS ++RLL +E EP+ +++F+ T LQ E
Sbjct: 88 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI---TERGALQEEL 144
Query: 416 GSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNY-RSKVADFGLSRL 474
W + N + HRDIK NIL+D N K+ DFG
Sbjct: 145 ARSFFWQVLEA-----------VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG---S 190
Query: 475 GMTESSHISTAPQGTPGYLDPQYHQYFHLSDKS-DVYSFGVVLIEII 520
G + T GT Y P++ +Y +S V+S G++L +++
Sbjct: 191 GALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV 237
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 95/227 (41%), Gaps = 38/227 (16%)
Query: 315 PYKEIEKATSFFSEKHRLGTGAYGTVYAGKLHNDDW-VAIKRFRYRDTDSIDQVMN---- 369
P KE E S + LG+G +G+VY+G +D+ VAIK ++ N
Sbjct: 14 PGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV 73
Query: 370 --EIKLLSSVS--HPNLLRLLG---------CCIEEGEPIL-VYEFMPNGTLCQHLQRER 415
E+ LL VS ++RLL +E EP+ +++F+ T LQ E
Sbjct: 74 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI---TERGALQEEL 130
Query: 416 GSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNY-RSKVADFGLSRL 474
W + N + HRDIK NIL+D N K+ DFG
Sbjct: 131 ARSFFWQVLEA-----------VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG---S 176
Query: 475 GMTESSHISTAPQGTPGYLDPQYHQYFHLSDKS-DVYSFGVVLIEII 520
G + T GT Y P++ +Y +S V+S G++L +++
Sbjct: 177 GALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV 223
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 95/227 (41%), Gaps = 38/227 (16%)
Query: 315 PYKEIEKATSFFSEKHRLGTGAYGTVYAGKLHNDDW-VAIKRFRYRDTDSIDQVMN---- 369
P KE E S + LG+G +G+VY+G +D+ VAIK ++ N
Sbjct: 27 PGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV 86
Query: 370 --EIKLLSSVS--HPNLLRLLG---------CCIEEGEPIL-VYEFMPNGTLCQHLQRER 415
E+ LL VS ++RLL +E EP+ +++F+ T LQ E
Sbjct: 87 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI---TERGALQEEL 143
Query: 416 GSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNY-RSKVADFGLSRL 474
W + N + HRDIK NIL+D N K+ DFG
Sbjct: 144 ARSFFWQVLEA-----------VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG---S 189
Query: 475 GMTESSHISTAPQGTPGYLDPQYHQYFHLSDKS-DVYSFGVVLIEII 520
G + T GT Y P++ +Y +S V+S G++L +++
Sbjct: 190 GALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV 236
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 95/227 (41%), Gaps = 38/227 (16%)
Query: 315 PYKEIEKATSFFSEKHRLGTGAYGTVYAGKLHNDDW-VAIKRFRYRDTDSIDQVMN---- 369
P KE E S + LG+G +G+VY+G +D+ VAIK ++ N
Sbjct: 14 PGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV 73
Query: 370 --EIKLLSSVS--HPNLLRLLG---------CCIEEGEPIL-VYEFMPNGTLCQHLQRER 415
E+ LL VS ++RLL +E EP+ +++F+ T LQ E
Sbjct: 74 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI---TERGALQEEL 130
Query: 416 GSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNY-RSKVADFGLSRL 474
W + N + HRDIK NIL+D N K+ DFG
Sbjct: 131 ARSFFWQVLEA-----------VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG---S 176
Query: 475 GMTESSHISTAPQGTPGYLDPQYHQYFHLSDKS-DVYSFGVVLIEII 520
G + T GT Y P++ +Y +S V+S G++L +++
Sbjct: 177 GALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV 223
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 95/227 (41%), Gaps = 38/227 (16%)
Query: 315 PYKEIEKATSFFSEKHRLGTGAYGTVYAGKLHNDDW-VAIKRFRYRDTDSIDQVMN---- 369
P KE E S + LG+G +G+VY+G +D+ VAIK ++ N
Sbjct: 34 PGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV 93
Query: 370 --EIKLLSSVS--HPNLLRLLG---------CCIEEGEPIL-VYEFMPNGTLCQHLQRER 415
E+ LL VS ++RLL +E EP+ +++F+ T LQ E
Sbjct: 94 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI---TERGALQEEL 150
Query: 416 GSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNY-RSKVADFGLSRL 474
W + N + HRDIK NIL+D N K+ DFG
Sbjct: 151 ARSFFWQVLEA-----------VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG---S 196
Query: 475 GMTESSHISTAPQGTPGYLDPQYHQYFHLSDKS-DVYSFGVVLIEII 520
G + T GT Y P++ +Y +S V+S G++L +++
Sbjct: 197 GALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV 243
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 95/227 (41%), Gaps = 38/227 (16%)
Query: 315 PYKEIEKATSFFSEKHRLGTGAYGTVYAGKLHNDDW-VAIKRFRYRDTDSIDQVMN---- 369
P KE E S + LG+G +G+VY+G +D+ VAIK ++ N
Sbjct: 15 PGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV 74
Query: 370 --EIKLLSSVS--HPNLLRLLG---------CCIEEGEPIL-VYEFMPNGTLCQHLQRER 415
E+ LL VS ++RLL +E EP+ +++F+ T LQ E
Sbjct: 75 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI---TERGALQEEL 131
Query: 416 GSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNY-RSKVADFGLSRL 474
W + N + HRDIK NIL+D N K+ DFG
Sbjct: 132 ARSFFWQVLEA-----------VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG---S 177
Query: 475 GMTESSHISTAPQGTPGYLDPQYHQYFHLSDKS-DVYSFGVVLIEII 520
G + T GT Y P++ +Y +S V+S G++L +++
Sbjct: 178 GALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV 224
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 90/219 (41%), Gaps = 33/219 (15%)
Query: 315 PYKEIEKATSFFSEKHRLGTGAYGTV-----------YAGKLHNDDWVAIKRFRYRDTD- 362
P+K+ +K F+ LG+G + V YA K IK+ + R +
Sbjct: 4 PFKQ-QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKF-------IKKRQSRASRR 55
Query: 363 --SIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLP 420
S +++ E+ +L V H N++ L + +L+ E + G L L ++ L
Sbjct: 56 GVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQK--ESLS 113
Query: 421 WXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNI-LLDYNY---RSKVADFGLSRLGM 476
YLH+ I H D+K NI LLD N K+ DFGL+
Sbjct: 114 EEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH--E 168
Query: 477 TESSHISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVV 515
E GTP ++ P+ Y L ++D++S GV+
Sbjct: 169 IEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVI 207
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 89/207 (42%), Gaps = 21/207 (10%)
Query: 332 LGTGAYGTVY-AGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVS-HPNLLRLLGCC 389
LG GAY V A L N A+K + S +V E++ L + N+L L+
Sbjct: 21 LGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNKNILELIEFF 80
Query: 390 IEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHR 449
++ LV+E + G++ H+Q+++ +LH+ I HR
Sbjct: 81 EDDTRFYLVFEKLQGGSILAHIQKQK--HFNEREASRVVRDVAAALDFLHTK---GIAHR 135
Query: 450 DIKSSNILLDYNYR---SKVADFGL-SRLGMTESSHISTAPQ-----GTPGYLDPQYHQY 500
D+K NIL + + K+ DF L S + + S T P+ G+ Y+ P+ +
Sbjct: 136 DLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAPEVVEV 195
Query: 501 F-----HLSDKSDVYSFGVVLIEIITA 522
F + D++S GVVL +++
Sbjct: 196 FTDQATFYDKRCDLWSLGVVLYIMLSG 222
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 95/216 (43%), Gaps = 41/216 (18%)
Query: 326 FSEKHRLGTGAYGTVYAGKL-HNDDWVAIKRF----RYRDTDSIDQVMNEIKLLSSVSHP 380
+++ +G G++G VY KL + + VAIK+ R+++ E++++ + H
Sbjct: 30 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN--------RELQIMRKLDHC 81
Query: 381 NLLRLLGCCIEEGEPI------LVYEFMPNGT--LCQHLQRERGSGLPWXXXXXXXXXXX 432
N++RL GE LV +++P + +H R + + LP
Sbjct: 82 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT-LPVIYVKLYMYQLF 140
Query: 433 XXXXYLHSAMNPPIYHRDIKSSNILLDYNYRS-KVADFGLSRLGMTESSHIST------- 484
Y+HS I HRDIK N+LLD + K+ DFG ++ + ++S
Sbjct: 141 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYR 197
Query: 485 APQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEII 520
AP+ G D + DV+S G VL E++
Sbjct: 198 APELIFGATD--------YTSSIDVWSAGCVLAELL 225
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 95/216 (43%), Gaps = 41/216 (18%)
Query: 326 FSEKHRLGTGAYGTVYAGKL-HNDDWVAIKRF----RYRDTDSIDQVMNEIKLLSSVSHP 380
+++ +G G++G VY KL + + VAIK+ R+++ E++++ + H
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN--------RELQIMRKLDHC 85
Query: 381 NLLRLLGCCIEEGEPI------LVYEFMPNGT--LCQHLQRERGSGLPWXXXXXXXXXXX 432
N++RL GE LV +++P + +H R + + LP
Sbjct: 86 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT-LPVIYVKLYMYQLF 144
Query: 433 XXXXYLHSAMNPPIYHRDIKSSNILLDYNYRS-KVADFGLSRLGMTESSHIST------- 484
Y+HS I HRDIK N+LLD + K+ DFG ++ + ++S
Sbjct: 145 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYR 201
Query: 485 APQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEII 520
AP+ G D + DV+S G VL E++
Sbjct: 202 APELIFGATD--------YTSSIDVWSAGCVLAELL 229
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 95/216 (43%), Gaps = 41/216 (18%)
Query: 326 FSEKHRLGTGAYGTVYAGKL-HNDDWVAIKRF----RYRDTDSIDQVMNEIKLLSSVSHP 380
+++ +G G++G VY KL + + VAIK+ R+++ E++++ + H
Sbjct: 41 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN--------RELQIMRKLDHC 92
Query: 381 NLLRLLGCCIEEGEPI------LVYEFMPNGT--LCQHLQRERGSGLPWXXXXXXXXXXX 432
N++RL GE LV +++P + +H R + + LP
Sbjct: 93 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT-LPVIYVKLYMYQLF 151
Query: 433 XXXXYLHSAMNPPIYHRDIKSSNILLDYNYRS-KVADFGLSRLGMTESSHIST------- 484
Y+HS I HRDIK N+LLD + K+ DFG ++ + ++S
Sbjct: 152 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYR 208
Query: 485 APQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEII 520
AP+ G D + DV+S G VL E++
Sbjct: 209 APELIFGATD--------YTSSIDVWSAGCVLAELL 236
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 95/216 (43%), Gaps = 41/216 (18%)
Query: 326 FSEKHRLGTGAYGTVYAGKL-HNDDWVAIKRF----RYRDTDSIDQVMNEIKLLSSVSHP 380
+++ +G G++G VY KL + + VAIK+ R+++ E++++ + H
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN--------RELQIMRKLDHC 85
Query: 381 NLLRLLGCCIEEGEPI------LVYEFMPNGT--LCQHLQRERGSGLPWXXXXXXXXXXX 432
N++RL GE LV +++P + +H R + + LP
Sbjct: 86 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT-LPVIYVKLYMYQLF 144
Query: 433 XXXXYLHSAMNPPIYHRDIKSSNILLDYNYRS-KVADFGLSRLGMTESSHIST------- 484
Y+HS I HRDIK N+LLD + K+ DFG ++ + ++S
Sbjct: 145 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYR 201
Query: 485 APQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEII 520
AP+ G D + DV+S G VL E++
Sbjct: 202 APELIFGATD--------YTSSIDVWSAGCVLAELL 229
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 99/228 (43%), Gaps = 33/228 (14%)
Query: 312 PFYPYKEIEKATSFFSEKHR----LGTGAYGTVYAG-KLHNDDWVAIKRFR--YRDTDSI 364
P + +E+ K E+++ +G+GAYG+V A VA+K+ ++
Sbjct: 6 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 65
Query: 365 DQVMNEIKLLSSVSHPNLLRLLGC-----CIEEGEPI-LVYEFM----PNGTLCQHLQRE 414
+ E++LL + H N++ LL +EE + LV M N CQ L +
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 125
Query: 415 RGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRL 474
L + Y+HSA I HRD+K SN+ ++ + K+ D+GL+R
Sbjct: 126 HVQFLIYQILRGLK--------YIHSA---DIIHRDLKPSNLAVNEDCELKILDYGLARH 174
Query: 475 GMTESSHISTAPQGTPGYLDPQYH-QYFHLSDKSDVYSFGVVLIEIIT 521
E T T Y P+ + H + D++S G ++ E++T
Sbjct: 175 TDDE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 91/213 (42%), Gaps = 25/213 (11%)
Query: 320 EKATSFFSEKHRLGTGAYGTV-YAGKLHNDDWVAIKRFR--YRDTDSIDQVMNEIKLLSS 376
E ++ S H +G+GAYG+V A + + VAIK+ ++ + E+ LL
Sbjct: 39 ELPKTYVSPTH-VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKH 97
Query: 377 VSHPNLLRLLGCCIEEGEPILVYEFMPNGTLCQ-HLQRERGSGLPWXXXXXXXXXXXXXX 435
+ H N++ LL Y+F Q LQ+ G
Sbjct: 98 MQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGMEFSEEKIQYLVYQMLKGL 157
Query: 436 XYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDP 495
Y+HSA + HRD+K N+ ++ + K+ DFGL+R E + GY+
Sbjct: 158 KYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMT----------GYVVT 204
Query: 496 QYHQ-------YFHLSDKSDVYSFGVVLIEIIT 521
++++ + H + D++S G ++ E++T
Sbjct: 205 RWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLT 237
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 74/175 (42%), Gaps = 5/175 (2%)
Query: 351 VAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTLCQH 410
V + +F S + + E + + HP+++ LL +G +V+EFM LC
Sbjct: 59 VDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFE 118
Query: 411 LQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRS---KVA 467
+ + +G + L + I HRD+K +LL S K+
Sbjct: 119 IVKRADAGFVYSEAVASHYMRQILEA-LRYCHDNNIIHRDVKPHCVLLASKENSAPVKLG 177
Query: 468 DFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITA 522
FG++ + + ES ++ GTP ++ P+ + DV+ GV+L +++
Sbjct: 178 GFGVA-IQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 231
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 97/223 (43%), Gaps = 23/223 (10%)
Query: 312 PFYPYKEIEKATSFFSEKHR----LGTGAYGTVYAG-KLHNDDWVAIKRFR--YRDTDSI 364
P + +E+ K E+++ +G+GAYG+V A VA+K+ ++
Sbjct: 6 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 65
Query: 365 DQVMNEIKLLSSVSHPNLLRLLGC-----CIEEGEPILVYEFMPNGTLCQHLQRERGSGL 419
+ E++LL + H N++ LL +EE + + + L ++ ++ +
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTD- 124
Query: 420 PWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTES 479
Y+HSA I HRD+K SN+ ++ + K+ DFGL+R E
Sbjct: 125 --DHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLARHTDDE- 178
Query: 480 SHISTAPQGTPGYLDPQYH-QYFHLSDKSDVYSFGVVLIEIIT 521
T T Y P+ + H + D++S G ++ E++T
Sbjct: 179 ---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 95/216 (43%), Gaps = 41/216 (18%)
Query: 326 FSEKHRLGTGAYGTVYAGKL-HNDDWVAIKRF----RYRDTDSIDQVMNEIKLLSSVSHP 380
+++ +G G++G VY KL + + VAIK+ R+++ E++++ + H
Sbjct: 26 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN--------RELQIMRKLDHC 77
Query: 381 NLLRLLGCCIEEGEPI------LVYEFMPNGT--LCQHLQRERGSGLPWXXXXXXXXXXX 432
N++RL GE LV +++P + +H R + + LP
Sbjct: 78 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT-LPVIYVKLYMYQLF 136
Query: 433 XXXXYLHSAMNPPIYHRDIKSSNILLDYNYRS-KVADFGLSRLGMTESSHIST------- 484
Y+HS I HRDIK N+LLD + K+ DFG ++ + ++S
Sbjct: 137 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYR 193
Query: 485 APQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEII 520
AP+ G D + DV+S G VL E++
Sbjct: 194 APELIFGATD--------YTSSIDVWSAGCVLAELL 221
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 95/216 (43%), Gaps = 41/216 (18%)
Query: 326 FSEKHRLGTGAYGTVYAGKL-HNDDWVAIKRF----RYRDTDSIDQVMNEIKLLSSVSHP 380
+++ +G G++G VY KL + + VAIK+ R+++ E++++ + H
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN--------RELQIMRKLDHC 73
Query: 381 NLLRLLGCCIEEGEPI------LVYEFMPNGT--LCQHLQRERGSGLPWXXXXXXXXXXX 432
N++RL GE LV +++P + +H R + + LP
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT-LPVIYVKLYMYQLF 132
Query: 433 XXXXYLHSAMNPPIYHRDIKSSNILLDYNYRS-KVADFGLSRLGMTESSHIST------- 484
Y+HS I HRDIK N+LLD + K+ DFG ++ + ++S
Sbjct: 133 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYR 189
Query: 485 APQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEII 520
AP+ G D + DV+S G VL E++
Sbjct: 190 APELIFGATD--------YTSSIDVWSAGCVLAELL 217
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 98/228 (42%), Gaps = 23/228 (10%)
Query: 307 GNSSVPFYPYKEIEKATSFFSEKHR----LGTGAYGTVYAG-KLHNDDWVAIKRFR--YR 359
G+ P + +E+ K E+++ +G+GAYG+V A VA+K+ ++
Sbjct: 1 GSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 60
Query: 360 DTDSIDQVMNEIKLLSSVSHPNLLRLLGC-----CIEEGEPILVYEFMPNGTLCQHLQRE 414
+ E++LL + H N++ LL +EE + + + L ++ +
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKSQ 120
Query: 415 RGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRL 474
+ + Y+HSA I HRD+K SN+ ++ + K+ DFGL R
Sbjct: 121 KLTD---DHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDSELKILDFGLCRH 174
Query: 475 GMTESSHISTAPQGTPGYLDPQYH-QYFHLSDKSDVYSFGVVLIEIIT 521
E T T Y P+ + H + D++S G ++ E++T
Sbjct: 175 TDDE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 95/216 (43%), Gaps = 41/216 (18%)
Query: 326 FSEKHRLGTGAYGTVYAGKL-HNDDWVAIKRF----RYRDTDSIDQVMNEIKLLSSVSHP 380
+++ +G G++G VY KL + + VAIK+ R+++ E++++ + H
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN--------RELQIMRKLDHC 73
Query: 381 NLLRLLGCCIEEGEPI------LVYEFMPNGT--LCQHLQRERGSGLPWXXXXXXXXXXX 432
N++RL GE LV +++P + +H R + + LP
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT-LPVIYVKLYMYQLF 132
Query: 433 XXXXYLHSAMNPPIYHRDIKSSNILLDYNYRS-KVADFGLSRLGMTESSHIST------- 484
Y+HS I HRDIK N+LLD + K+ DFG ++ + ++S
Sbjct: 133 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYR 189
Query: 485 APQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEII 520
AP+ G D + DV+S G VL E++
Sbjct: 190 APELIFGATD--------YTSSIDVWSAGCVLAELL 217
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 95/216 (43%), Gaps = 41/216 (18%)
Query: 326 FSEKHRLGTGAYGTVYAGKL-HNDDWVAIKRF----RYRDTDSIDQVMNEIKLLSSVSHP 380
+++ +G G++G VY KL + + VAIK+ R+++ E++++ + H
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN--------RELQIMRKLDHC 73
Query: 381 NLLRLLGCCIEEGEPI------LVYEFMPNGT--LCQHLQRERGSGLPWXXXXXXXXXXX 432
N++RL GE LV +++P + +H R + + LP
Sbjct: 74 NIVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQT-LPVIYVKLYMYQLF 132
Query: 433 XXXXYLHSAMNPPIYHRDIKSSNILLDYNYRS-KVADFGLSRLGMTESSHIST------- 484
Y+HS I HRDIK N+LLD + K+ DFG ++ + ++S
Sbjct: 133 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYR 189
Query: 485 APQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEII 520
AP+ G D + DV+S G VL E++
Sbjct: 190 APELIFGATD--------YTSSIDVWSAGCVLAELL 217
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 78/193 (40%), Gaps = 32/193 (16%)
Query: 340 VYAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVY 399
V A +L + ++ R+T + QV HP+++ L+ LV+
Sbjct: 129 VTAERLSPEQLEEVREATRRETHILRQV---------AGHPHIITLIDSYESSSFMFLVF 179
Query: 400 EFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLD 459
+ M G L +L + L +LH+ I HRD+K NILLD
Sbjct: 180 DLMRKGELFDYLTEK--VALSEKETRSIMRSLLEAVSFLHANN---IVHRDLKPENILLD 234
Query: 460 YNYRSKVADFGLSRLGMTESSHISTAPQ-----GTPGYLDPQY------HQYFHLSDKSD 508
N + +++DFG S H+ + GTPGYL P+ + + D
Sbjct: 235 DNMQIRLSDFGF-------SCHLEPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVD 287
Query: 509 VYSFGVVLIEIIT 521
+++ GV+L ++
Sbjct: 288 LWACGVILFTLLA 300
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 98/228 (42%), Gaps = 33/228 (14%)
Query: 312 PFYPYKEIEKATSFFSEKHR----LGTGAYGTVYAG-KLHNDDWVAIKRFR--YRDTDSI 364
P + +E+ K E+++ +G+GAYG+V A VA+K+ ++
Sbjct: 2 PTFYRQELAKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHA 61
Query: 365 DQVMNEIKLLSSVSHPNLLRLLGC-----CIEEGEPI-LVYEFM----PNGTLCQHLQRE 414
+ E++LL + H N++ LL +EE + LV M N C L +
Sbjct: 62 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCAKLTDD 121
Query: 415 RGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRL 474
L + Y+HSA I HRD+K SN+ ++ + K+ DFGL+R
Sbjct: 122 HVQFLIYQILRGLK--------YIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARH 170
Query: 475 GMTESSHISTAPQGTPGYLDPQYH-QYFHLSDKSDVYSFGVVLIEIIT 521
E T T Y P+ + H + D++S G ++ E++T
Sbjct: 171 TDDE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 214
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 95/216 (43%), Gaps = 41/216 (18%)
Query: 326 FSEKHRLGTGAYGTVYAGKL-HNDDWVAIKRF----RYRDTDSIDQVMNEIKLLSSVSHP 380
+++ +G G++G VY KL + + VAIK+ R+++ E++++ + H
Sbjct: 23 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN--------RELQIMRKLDHC 74
Query: 381 NLLRLLGCCIEEGEPI------LVYEFMPNGT--LCQHLQRERGSGLPWXXXXXXXXXXX 432
N++RL GE LV +++P + +H R + + LP
Sbjct: 75 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT-LPVIYVKLYMYQLF 133
Query: 433 XXXXYLHSAMNPPIYHRDIKSSNILLDYNYRS-KVADFGLSRLGMTESSHIST------- 484
Y+HS I HRDIK N+LLD + K+ DFG ++ + ++S
Sbjct: 134 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYR 190
Query: 485 APQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEII 520
AP+ G D + DV+S G VL E++
Sbjct: 191 APELIFGATD--------YTSSIDVWSAGCVLAELL 218
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 99/216 (45%), Gaps = 41/216 (18%)
Query: 326 FSEKHRLGTGAYGTVYAGKL-HNDDWVAIKRF----RYRDTDSIDQVMNEIKLLSSVSHP 380
+++ +G G++G VY KL + + VAIK+ R+++ E++++ + H
Sbjct: 35 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN--------RELQIMRKLDHC 86
Query: 381 NLLRLLGCCIEEGEPI------LVYEFMPNGT--LCQHLQRERGSGLPWXXXXXXXXXXX 432
N++RL GE LV +++P + +H R + + LP
Sbjct: 87 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT-LPVIYVKLYMYQLF 145
Query: 433 XXXXYLHSAMNPPIYHRDIKSSNILLDYNYRS-KVADFGLSRLGMTESSHISTAPQGTPG 491
Y+HS I HRDIK N+LLD + K+ DFG ++ + ++S
Sbjct: 146 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS-------- 194
Query: 492 YLDPQYHQ----YFHLSDKS---DVYSFGVVLIEII 520
Y+ +Y++ F +D + DV+S G VL E++
Sbjct: 195 YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 230
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 98/228 (42%), Gaps = 33/228 (14%)
Query: 312 PFYPYKEIEKATSFFSEKHR----LGTGAYGTVYAG-KLHNDDWVAIKRFR--YRDTDSI 364
P + +E+ K E+++ +G+GAYG+V A VA+K+ ++
Sbjct: 6 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 65
Query: 365 DQVMNEIKLLSSVSHPNLLRLLGC-----CIEEGEPI-LVYEFM----PNGTLCQHLQRE 414
+ E++LL + H N++ LL +EE + LV M N CQ L +
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 125
Query: 415 RGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRL 474
L + Y+HSA I HRD+K SN+ ++ + K+ DFGL+R
Sbjct: 126 HVQFLIYQILRGLK--------YIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARH 174
Query: 475 GMTESSHISTAPQGTPGYLDPQYH-QYFHLSDKSDVYSFGVVLIEIIT 521
E T T Y P+ H + D++S G ++ E++T
Sbjct: 175 TDDE----MTGYVATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLT 218
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 74/175 (42%), Gaps = 5/175 (2%)
Query: 351 VAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTLCQH 410
V + +F S + + E + + HP+++ LL +G +V+EFM LC
Sbjct: 57 VDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFE 116
Query: 411 LQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRS---KVA 467
+ + +G + L + I HRD+K +LL S K+
Sbjct: 117 IVKRADAGFVYSEAVASHYMRQILEA-LRYCHDNNIIHRDVKPHCVLLASKENSAPVKLG 175
Query: 468 DFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITA 522
FG++ + + ES ++ GTP ++ P+ + DV+ GV+L +++
Sbjct: 176 GFGVA-IQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 229
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 91/213 (42%), Gaps = 25/213 (11%)
Query: 320 EKATSFFSEKHRLGTGAYGTV-YAGKLHNDDWVAIKRFR--YRDTDSIDQVMNEIKLLSS 376
E ++ S H +G+GAYG+V A + + VAIK+ ++ + E+ LL
Sbjct: 21 ELPKTYVSPTH-VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKH 79
Query: 377 VSHPNLLRLLGCCIEEGEPILVYEFMPNGTLCQ-HLQRERGSGLPWXXXXXXXXXXXXXX 435
+ H N++ LL Y+F Q LQ+ G
Sbjct: 80 MQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEKIQYLVYQMLKGL 139
Query: 436 XYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDP 495
Y+HSA + HRD+K N+ ++ + K+ DFGL+R E + GY+
Sbjct: 140 KYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMT----------GYVVT 186
Query: 496 QYHQ-------YFHLSDKSDVYSFGVVLIEIIT 521
++++ + H + D++S G ++ E++T
Sbjct: 187 RWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLT 219
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 88/200 (44%), Gaps = 19/200 (9%)
Query: 332 LGTGAYGTVY--AGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGCC 389
LGTGA+G V+ + +++ A ++D + V EI+ +S + HP L+ L
Sbjct: 165 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDK-ETVRKEIQTMSVLRHPTLVNLHDAF 223
Query: 390 IEEGEPILVYEFMPNGTLC-----QHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNP 444
++ E +++YEFM G L +H + + + Y+H + P
Sbjct: 224 EDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKP 283
Query: 445 PIYHRDIKSSNILLDYNYRSKVADFGLS-RLGMTESSHISTAPQGTPGYLDPQYHQYFHL 503
K SN L K+ DFGL+ L +S ++T GT + P+ + +
Sbjct: 284 ENIMFTTKRSNEL-------KLIDFGLTAHLDPKQSVKVTT---GTAEFAAPEVAEGKPV 333
Query: 504 SDKSDVYSFGVVLIEIITAL 523
+D++S GV+ +++ L
Sbjct: 334 GYYTDMWSVGVLSYILLSGL 353
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 81/200 (40%), Gaps = 13/200 (6%)
Query: 332 LGTGAYGTVYAGKLH-NDDWVAIKRF--RYRDTDSIDQVMNEIKLLSSVSHPNLLRL--- 385
+G GAYG V + + VAIK+ + + + + E+K+L H N++ +
Sbjct: 63 IGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDI 122
Query: 386 LGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPP 445
L + GE VY + H L Y+HSA
Sbjct: 123 LRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQ--- 179
Query: 446 IYHRDIKSSNILLDYNYRSKVADFGLSR---LGMTESSHISTAPQGTPGYLDPQYHQYFH 502
+ HRD+K SN+L++ N K+ DFG++R E + T T Y P+ H
Sbjct: 180 VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLH 239
Query: 503 -LSDKSDVYSFGVVLIEIIT 521
+ D++S G + E++
Sbjct: 240 EYTQAIDLWSVGCIFGEMLA 259
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 95/216 (43%), Gaps = 41/216 (18%)
Query: 326 FSEKHRLGTGAYGTVYAGKL-HNDDWVAIKRF----RYRDTDSIDQVMNEIKLLSSVSHP 380
+++ +G G++G VY KL + + VAIK+ R+++ E++++ + H
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN--------RELQIMRKLDHC 73
Query: 381 NLLRLLGCCIEEGEPI------LVYEFMPNGT--LCQHLQRERGSGLPWXXXXXXXXXXX 432
N++RL GE LV +++P + +H R + + LP
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT-LPVIYVKLYMYQLF 132
Query: 433 XXXXYLHSAMNPPIYHRDIKSSNILLDYNYRS-KVADFGLSRLGMTESSHIS-------T 484
Y+HS I HRDIK N+LLD + K+ DFG ++ + ++S
Sbjct: 133 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYR 189
Query: 485 APQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEII 520
AP+ G D + DV+S G VL E++
Sbjct: 190 APELIFGATD--------YTSSIDVWSAGCVLAELL 217
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 89/205 (43%), Gaps = 15/205 (7%)
Query: 326 FSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFR-YRDTDSIDQVMNEIKLLSSVSHPNLL 383
+++ +G GAYG V + H VAIK+ + + + EI++L H N++
Sbjct: 45 YTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRFRHENVI 104
Query: 384 ----RLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLH 439
L +E + + + + L + L+ ++ S Y+H
Sbjct: 105 GIRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSN---DHICYFLYQILRGLKYIH 161
Query: 440 SAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHIS--TAPQGTPGYLDPQY 497
SA + HRD+K SN+L++ K+ DFGL+R+ E H T T Y P+
Sbjct: 162 SAN---VLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEI 218
Query: 498 HQYFHLSDKS-DVYSFGVVLIEIIT 521
KS D++S G +L E+++
Sbjct: 219 MLNSKGYTKSIDIWSVGCILAEMLS 243
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 88/200 (44%), Gaps = 19/200 (9%)
Query: 332 LGTGAYGTVY--AGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGCC 389
LGTGA+G V+ + +++ A ++D + V EI+ +S + HP L+ L
Sbjct: 59 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDK-ETVRKEIQTMSVLRHPTLVNLHDAF 117
Query: 390 IEEGEPILVYEFMPNGTLC-----QHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNP 444
++ E +++YEFM G L +H + + + Y+H + P
Sbjct: 118 EDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKP 177
Query: 445 PIYHRDIKSSNILLDYNYRSKVADFGLS-RLGMTESSHISTAPQGTPGYLDPQYHQYFHL 503
K SN L K+ DFGL+ L +S ++T GT + P+ + +
Sbjct: 178 ENIMFTTKRSNEL-------KLIDFGLTAHLDPKQSVKVTT---GTAEFAAPEVAEGKPV 227
Query: 504 SDKSDVYSFGVVLIEIITAL 523
+D++S GV+ +++ L
Sbjct: 228 GYYTDMWSVGVLSYILLSGL 247
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 97/223 (43%), Gaps = 23/223 (10%)
Query: 312 PFYPYKEIEKATSFFSEKHR----LGTGAYGTVYAG-KLHNDDWVAIKRFR--YRDTDSI 364
P + +E+ K E+++ +G+GAYG+V A VA+K+ ++
Sbjct: 6 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 65
Query: 365 DQVMNEIKLLSSVSHPNLLRLLGC-----CIEEGEPILVYEFMPNGTLCQHLQRERGSGL 419
+ E++LL + H N++ LL +EE + + + L ++ ++ +
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTD- 124
Query: 420 PWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTES 479
Y+HSA I HRD+K SN+ ++ + K+ DFGL+R E
Sbjct: 125 --DHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE- 178
Query: 480 SHISTAPQGTPGYLDPQYH-QYFHLSDKSDVYSFGVVLIEIIT 521
T T Y P+ + H + D++S G ++ E++T
Sbjct: 179 ---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 81/200 (40%), Gaps = 13/200 (6%)
Query: 332 LGTGAYGTVYAGKLH-NDDWVAIKRF--RYRDTDSIDQVMNEIKLLSSVSHPNLLRL--- 385
+G GAYG V + + VAIK+ + + + + E+K+L H N++ +
Sbjct: 62 IGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDI 121
Query: 386 LGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPP 445
L + GE VY + H L Y+HSA
Sbjct: 122 LRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQ--- 178
Query: 446 IYHRDIKSSNILLDYNYRSKVADFGLSR---LGMTESSHISTAPQGTPGYLDPQYHQYFH 502
+ HRD+K SN+L++ N K+ DFG++R E + T T Y P+ H
Sbjct: 179 VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLH 238
Query: 503 -LSDKSDVYSFGVVLIEIIT 521
+ D++S G + E++
Sbjct: 239 EYTQAIDLWSVGCIFGEMLA 258
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 98/228 (42%), Gaps = 33/228 (14%)
Query: 312 PFYPYKEIEKATSFFSEKHR----LGTGAYGTVYAG-KLHNDDWVAIKRFR--YRDTDSI 364
P + +E+ K E+++ +G+GAYG+V A VA+K+ ++
Sbjct: 6 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHA 65
Query: 365 DQVMNEIKLLSSVSHPNLLRLLGC-----CIEEGEPI-LVYEFM----PNGTLCQHLQRE 414
+ E++LL + H N++ LL +EE + LV M N CQ L +
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 125
Query: 415 RGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRL 474
L + Y+HSA I HRD+K SN+ ++ + K+ DF L+R
Sbjct: 126 HVQFLIYQILRGLK--------YIHSA---DIIHRDLKPSNLAVNEDCELKILDFYLARH 174
Query: 475 GMTESSHISTAPQGTPGYLDPQYH-QYFHLSDKSDVYSFGVVLIEIIT 521
E T T Y P+ + H + D++S G ++ E++T
Sbjct: 175 TDDE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 89/204 (43%), Gaps = 25/204 (12%)
Query: 332 LGTGAYGTVYAGKLH-NDDWVAIKRFR-YRDTDSIDQVMNEIKLLSSVSHPNLL----RL 385
+G GAYG V + + N VAIK+ + + + EIK+L H N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 386 LGCCIEEGEPILVYEFMPNGTL-----CQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHS 440
IE+ + + + + + L CQHL + + Y+HS
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSNDHICYFLYQILRGLK--------YIHS 146
Query: 441 AMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHIS--TAPQGTPGYLDPQYH 498
A + HRD+K SN+LL+ K+ DFGL+R+ + H T T Y P+
Sbjct: 147 AN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 203
Query: 499 QYFHLSDKS-DVYSFGVVLIEIIT 521
KS D++S G +L E+++
Sbjct: 204 LNSKGYTKSIDIWSVGCILAEMLS 227
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 88/204 (43%), Gaps = 20/204 (9%)
Query: 332 LGTGAYGTVY---------AGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSH-PN 381
LGTGAYG V+ GKL+ V K + + + E ++L + P
Sbjct: 62 LGTGAYGKVFLVRKISGHDTGKLYAMK-VLKKATIVQKAKTTEHTRTERQVLEHIRQSPF 120
Query: 382 LLRLLGCCIEEGEPILVYEFMPNGTLCQHL-QRERGSGLPWXXXXXXXXXXXXXXXYLHS 440
L+ L E + L+ +++ G L HL QRER +LH
Sbjct: 121 LVTLHYAFQTETKLHLILDYINGGELFTHLSQRER---FTEHEVQIYVGEIVLALEHLHK 177
Query: 441 AMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQY 500
I +RDIK NILLD N + DFGLS+ + + + + GT Y+ P +
Sbjct: 178 L---GIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRG 234
Query: 501 FHLS-DKS-DVYSFGVVLIEIITA 522
DK+ D +S GV++ E++T
Sbjct: 235 GDSGHDKAVDWWSLGVLMYELLTG 258
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 110/287 (38%), Gaps = 60/287 (20%)
Query: 332 LGTGAYG-----------TVYAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHP 380
+G GA+G VYA KL + +F E +++ + P
Sbjct: 83 IGRGAFGEVQLVRHKASQKVYAMKL-------LSKFEMIKRSDSAFFWEERDIMAFANSP 135
Query: 381 NLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHS 440
+++L ++ +V E+MP G L + +P +HS
Sbjct: 136 WVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMS---NYDVPEKWAKFYTAEVVLALDAIHS 192
Query: 441 AMNPPIYHRDIKSSNILLDYNYRSKVADFGL-SRLGMTESSHISTAPQGTPGYLDPQYHQ 499
+ HRD+K N+LLD + K+ADFG ++ T H TA GTP Y+ P+ +
Sbjct: 193 M---GLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTA-VGTPDYISPEVLK 248
Query: 500 YF----HLSDKSDVYSFGVVLIEII-------------TALKVVDFSR-----------P 531
+ + D +S GV L E++ T K++D
Sbjct: 249 SQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSLCFPEDAEISK 308
Query: 532 HSEVNLAALAID---RIGRGCVDEIID-PYLEPHRDAWTLSSIHNVA 574
H++ + A D R+GR V+EI P+ + D W +I A
Sbjct: 309 HAKNLICAFLTDREVRLGRNGVEEIKQHPFFK--NDQWNWDNIRETA 353
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 90/215 (41%), Gaps = 18/215 (8%)
Query: 317 KEIEKATSFFSEKHRLGTGAYGTVYAGKLHNDDW-VAIKRF---RYRDTDSI---DQVMN 369
KE E S + LG+G +G+VY+G +D+ VAIK R D + +V
Sbjct: 1 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 60
Query: 370 EIKLLSSVS--HPNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXX 427
E+ LL VS ++RLL +L+ E M ERG+
Sbjct: 61 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERMEPVQDLFDFITERGA----LQEELA 116
Query: 428 XXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNY-RSKVADFGLSRLGMTESSHISTAP 486
+ N + HRDIK NIL+D N K+ DFG G + T
Sbjct: 117 RSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDTVYTDF 173
Query: 487 QGTPGYLDPQYHQYFHLSDKS-DVYSFGVVLIEII 520
GT Y P++ +Y +S V+S G++L +++
Sbjct: 174 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV 208
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 96/225 (42%), Gaps = 38/225 (16%)
Query: 317 KEIEKATSFFSEKHRLGTGAYGTVYAGKLHNDDW-VAIKRF---RYRDTDSI---DQVMN 369
KE E S + LG+G +G+VY+G +D+ VAIK R D + +V
Sbjct: 2 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 61
Query: 370 EIKLLSSVS--HPNLLRLLG---------CCIEEGEPIL-VYEFMPNGTLCQHLQRERGS 417
E+ LL VS ++RLL +E EP+ +++F+ T LQ E
Sbjct: 62 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI---TERGALQEELAR 118
Query: 418 GLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNY-RSKVADFGLSRLGM 476
W + N + HRDIK NIL+D N K+ DFG G
Sbjct: 119 SFFWQVLEA-----------VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG---SGA 164
Query: 477 TESSHISTAPQGTPGYLDPQYHQYFHLSDKS-DVYSFGVVLIEII 520
+ T GT Y P++ +Y +S V+S G++L +++
Sbjct: 165 LLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV 209
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 93/237 (39%), Gaps = 26/237 (10%)
Query: 331 RLGTGAYGTVYAGKLHNDDWVAIKRFRYRD--TDSIDQVMNEIKLLSSVSHPNLLRLLGC 388
+L G ++ G+ +D + +K + RD T E L SHPN+L +LG
Sbjct: 17 KLNENHSGELWKGRWQGND-IVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGA 75
Query: 389 C--IEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPI 446
C P L+ +MP G+L L + +LH+ + P I
Sbjct: 76 CQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHT-LEPLI 134
Query: 447 YHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLSDK 506
+ S ++++D + ++++ + + S S P ++ P+ Q
Sbjct: 135 PRHALNSRSVMIDEDMTARIS------MADVKFSFQSPGRMYAPAWVAPEALQKKPEDTN 188
Query: 507 ---SDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLEP 560
+D++SF V+L E++T EV A L+ IG E + P + P
Sbjct: 189 RRSADMWSFAVLLWELVT-----------REVPFADLSNMEIGMKVALEGLRPTIPP 234
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 94/225 (41%), Gaps = 38/225 (16%)
Query: 317 KEIEKATSFFSEKHRLGTGAYGTVYAGKLHNDDW-VAIKRFRYRDTDSIDQVMN------ 369
KE E S + LG+G +G+VY+G +D+ VAIK ++ N
Sbjct: 2 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 61
Query: 370 EIKLLSSVS--HPNLLRLLG---------CCIEEGEPIL-VYEFMPNGTLCQHLQRERGS 417
E+ LL VS ++RLL +E EP+ +++F+ T LQ E
Sbjct: 62 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI---TERGALQEELAR 118
Query: 418 GLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNY-RSKVADFGLSRLGM 476
W + N + HRDIK NIL+D N K+ DFG G
Sbjct: 119 SFFWQVLEA-----------VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG---SGA 164
Query: 477 TESSHISTAPQGTPGYLDPQYHQYFHLSDKS-DVYSFGVVLIEII 520
+ T GT Y P++ +Y +S V+S G++L +++
Sbjct: 165 LLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV 209
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 96/225 (42%), Gaps = 38/225 (16%)
Query: 317 KEIEKATSFFSEKHRLGTGAYGTVYAGKLHNDDW-VAIKRF---RYRDTDSI---DQVMN 369
KE E S + LG+G +G+VY+G +D+ VAIK R D + +V
Sbjct: 2 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 61
Query: 370 EIKLLSSVS--HPNLLRLLG---------CCIEEGEPIL-VYEFMPNGTLCQHLQRERGS 417
E+ LL VS ++RLL +E EP+ +++F+ T LQ E
Sbjct: 62 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI---TERGALQEELAR 118
Query: 418 GLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNY-RSKVADFGLSRLGM 476
W + N + HRDIK NIL+D N K+ DFG G
Sbjct: 119 SFFWQVLEA-----------VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG---SGA 164
Query: 477 TESSHISTAPQGTPGYLDPQYHQYFHLSDKS-DVYSFGVVLIEII 520
+ T GT Y P++ +Y +S V+S G++L +++
Sbjct: 165 LLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV 209
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 98/228 (42%), Gaps = 33/228 (14%)
Query: 312 PFYPYKEIEKATSFFSEKHR----LGTGAYGTVYAG-KLHNDDWVAIKRFR--YRDTDSI 364
P + +E+ K E+++ +G+GAYG+V A VA+K+ ++
Sbjct: 6 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 65
Query: 365 DQVMNEIKLLSSVSHPNLLRLLGC-----CIEEGEPI-LVYEFM----PNGTLCQHLQRE 414
+ E++LL + H N++ LL +EE + LV M N CQ L +
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 125
Query: 415 RGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRL 474
L + Y+HSA I HRD+K SN+ ++ + K+ FGL+R
Sbjct: 126 HVQFLIYQILRGLK--------YIHSA---DIIHRDLKPSNLAVNEDCELKILGFGLARH 174
Query: 475 GMTESSHISTAPQGTPGYLDPQYH-QYFHLSDKSDVYSFGVVLIEIIT 521
E T T Y P+ + H + D++S G ++ E++T
Sbjct: 175 TDDE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 88/220 (40%), Gaps = 23/220 (10%)
Query: 319 IEKATSFFSEKHRLGTGAYGTV-YAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSV 377
I+ F +K LG G + V LH+ + A+KR + ++ E +
Sbjct: 26 IDNKHYLFIQK--LGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLF 83
Query: 378 SHPNLLRLLGCCIEE----GEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXX 433
+HPN+LRL+ C+ E E L+ F GTL ++R + G +
Sbjct: 84 NHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKG-NFLTEDQILWLLLG 142
Query: 434 XXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGL----------SRLGMTESSHIS 483
L + HRD+K +NILL + + D G SR +T
Sbjct: 143 ICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQD--W 200
Query: 484 TAPQGTPGYLDPQY---HQYFHLSDKSDVYSFGVVLIEII 520
A + T Y P+ + + +++DV+S G VL ++
Sbjct: 201 AAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMM 240
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 94/225 (41%), Gaps = 38/225 (16%)
Query: 317 KEIEKATSFFSEKHRLGTGAYGTVYAGKLHNDDW-VAIKRFRYRDTDSIDQVMN------ 369
KE E S + LG+G +G+VY+G +D+ VAIK ++ N
Sbjct: 1 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 60
Query: 370 EIKLLSSVS--HPNLLRLLG---------CCIEEGEPIL-VYEFMPNGTLCQHLQRERGS 417
E+ LL VS ++RLL +E EP+ +++F+ T LQ E
Sbjct: 61 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI---TERGALQEELAR 117
Query: 418 GLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNY-RSKVADFGLSRLGM 476
W + N + HRDIK NIL+D N K+ DFG G
Sbjct: 118 SFFWQVLEA-----------VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG---SGA 163
Query: 477 TESSHISTAPQGTPGYLDPQYHQYFHLSDKS-DVYSFGVVLIEII 520
+ T GT Y P++ +Y +S V+S G++L +++
Sbjct: 164 LLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV 208
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 5/78 (6%)
Query: 448 HRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFH----- 502
HRDIK NIL+D N ++ADFG M + + S+ GTP Y+ P+ Q
Sbjct: 198 HRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGR 257
Query: 503 LSDKSDVYSFGVVLIEII 520
+ D +S GV + E++
Sbjct: 258 YGPECDWWSLGVCMYEML 275
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 96/225 (42%), Gaps = 38/225 (16%)
Query: 317 KEIEKATSFFSEKHRLGTGAYGTVYAGKLHNDDW-VAIKRF---RYRDTDSI---DQVMN 369
KE E S + LG+G +G+VY+G +D+ VAIK R D + +V
Sbjct: 24 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 83
Query: 370 EIKLLSSVS--HPNLLRLLG---------CCIEEGEPIL-VYEFMPNGTLCQHLQRERGS 417
E+ LL VS ++RLL +E EP+ +++F+ T LQ E
Sbjct: 84 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI---TERGALQEELAR 140
Query: 418 GLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNY-RSKVADFGLSRLGM 476
W + N + HRDIK NIL+D N K+ DFG G
Sbjct: 141 SFFWQVLEA-----------VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG---SGA 186
Query: 477 TESSHISTAPQGTPGYLDPQYHQYFHLSDKS-DVYSFGVVLIEII 520
+ T GT Y P++ +Y +S V+S G++L +++
Sbjct: 187 LLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV 231
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 98/228 (42%), Gaps = 33/228 (14%)
Query: 312 PFYPYKEIEKATSFFSEKHR----LGTGAYGTVYAG-KLHNDDWVAIKRFR--YRDTDSI 364
P + +E+ K E+++ +G+GAYG+V A VA+K+ ++
Sbjct: 6 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 65
Query: 365 DQVMNEIKLLSSVSHPNLLRLLGC-----CIEEGEPI-LVYEFM----PNGTLCQHLQRE 414
+ E++LL + H N++ LL +EE + LV M N CQ L +
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 125
Query: 415 RGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRL 474
L + Y+HSA I HRD+K SN+ ++ + K+ D GL+R
Sbjct: 126 HVQFLIYQILRGLK--------YIHSA---DIIHRDLKPSNLAVNEDCELKILDAGLARH 174
Query: 475 GMTESSHISTAPQGTPGYLDPQYH-QYFHLSDKSDVYSFGVVLIEIIT 521
E T T Y P+ + H + D++S G ++ E++T
Sbjct: 175 TDDE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 98/218 (44%), Gaps = 45/218 (20%)
Query: 326 FSEKHRLGTGAYGTVYAGKL-HNDDWVAIKR------FRYRDTDSIDQVMNEIKLLSSVS 378
+++ +G G++G VY KL + + VAIK+ F+ R E++++ +
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNR----------ELQIMRKLD 71
Query: 379 HPNLLRLLGCCIEEGEPI------LVYEFMPNGT--LCQHLQRERGSGLPWXXXXXXXXX 430
H N++RL GE LV +++P + +H R + + LP
Sbjct: 72 HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT-LPVIYVKLYMYQ 130
Query: 431 XXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRS-KVADFGLSRLGMTESSHISTAPQGT 489
Y+HS I HRDIK N+LLD + K+ DFG ++ + ++S
Sbjct: 131 LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS------ 181
Query: 490 PGYLDPQYHQ----YFHLSDKS---DVYSFGVVLIEII 520
Y+ +Y++ F +D + DV+S G VL E++
Sbjct: 182 --YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 217
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 60/286 (20%), Positives = 112/286 (39%), Gaps = 42/286 (14%)
Query: 332 LGTGAYGTVYAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIE 391
+G G +G VY G+ H + + + + D + E+ H N++ +G C+
Sbjct: 41 IGKGRFGQVYHGRWHGEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMS 100
Query: 392 EGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDI 451
++ TL + R+ L YLH+ I H+D+
Sbjct: 101 PPHLAIITSLCKGRTLYS-VVRDAKIVLDVNKTRQIAQEIVKGMGYLHAK---GILHKDL 156
Query: 452 KSSNILLDYNYRSKVADFGLSRL-GMTESSHISTAPQGTPGY-----------LDPQYHQ 499
KS N+ D N + + DFGL + G+ ++ + G+ L P +
Sbjct: 157 KSKNVFYD-NGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEE 215
Query: 500 -YFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYL 558
S SDV++ G + E + A + ++P A I ++G G +
Sbjct: 216 DKLPFSKHSDVFALGTIWYE-LHAREWPFKTQP------AEAIIWQMGTG---------M 259
Query: 559 EPHRDAWTLSSI---HNVAELAFRCLAFHRDMRPTMMEVAEELEHI 601
+P+ LS I ++++ C AF ++ RPT ++ + LE +
Sbjct: 260 KPN-----LSQIGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKL 300
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 98/228 (42%), Gaps = 33/228 (14%)
Query: 312 PFYPYKEIEKATSFFSEKHR----LGTGAYGTVYAG-KLHNDDWVAIKRFR--YRDTDSI 364
P + +E+ K E+++ +G+GAYG+V A VA+K+ ++
Sbjct: 6 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 65
Query: 365 DQVMNEIKLLSSVSHPNLLRLLGC-----CIEEGEPI-LVYEFM----PNGTLCQHLQRE 414
+ E++LL + H N++ LL +EE + LV M N CQ L +
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 125
Query: 415 RGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRL 474
L + Y+HSA I HRD+K SN+ ++ + K+ D GL+R
Sbjct: 126 HVQFLIYQILRGLK--------YIHSA---DIIHRDLKPSNLAVNEDCELKILDRGLARH 174
Query: 475 GMTESSHISTAPQGTPGYLDPQYH-QYFHLSDKSDVYSFGVVLIEIIT 521
E T T Y P+ + H + D++S G ++ E++T
Sbjct: 175 TDDE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 94/218 (43%), Gaps = 45/218 (20%)
Query: 326 FSEKHRLGTGAYGTVYAGKL-HNDDWVAIKR------FRYRDTDSIDQVMNEIKLLSSVS 378
+++ +G G++G VY KL + + VAIK+ F+ R E++++ +
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNR----------ELQIMRKLD 71
Query: 379 HPNLLRLLGCCIEEGEPI------LVYEFMPNGT--LCQHLQRERGSGLPWXXXXXXXXX 430
H N++RL GE LV +++P + +H R + + LP
Sbjct: 72 HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQT-LPVIYVKLYMYQ 130
Query: 431 XXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRS-KVADFGLSRLGMTESSHIST----- 484
Y+HS I HRDIK N+LLD + K+ DFG ++ + ++S
Sbjct: 131 LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY 187
Query: 485 --APQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEII 520
AP+ G D + DV+S G VL E++
Sbjct: 188 YRAPELIFGATD--------YTSSIDVWSAGCVLAELL 217
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 98/218 (44%), Gaps = 45/218 (20%)
Query: 326 FSEKHRLGTGAYGTVYAGKL-HNDDWVAIKR------FRYRDTDSIDQVMNEIKLLSSVS 378
+++ +G G++G VY KL + + VAIK+ F+ R E++++ +
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNR----------ELQIMRKLD 71
Query: 379 HPNLLRLLGCCIEEGEPI------LVYEFMPNGT--LCQHLQRERGSGLPWXXXXXXXXX 430
H N++RL GE LV +++P + +H R + + LP
Sbjct: 72 HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT-LPVIYVKLYMYQ 130
Query: 431 XXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRS-KVADFGLSRLGMTESSHISTAPQGT 489
Y+HS I HRDIK N+LLD + K+ DFG ++ + ++S
Sbjct: 131 LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS------ 181
Query: 490 PGYLDPQYHQ----YFHLSDKS---DVYSFGVVLIEII 520
Y+ +Y++ F +D + DV+S G VL E++
Sbjct: 182 --YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 217
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 88/199 (44%), Gaps = 15/199 (7%)
Query: 332 LGTGAYGTV-YAGKLHNDDWVAIKRFRYRDTDSIDQ-VMNEIKLLSSVSHPNLL----RL 385
+G GAYG V A N VAIK+ + + Q + EIK+L H N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHENIIGINDII 94
Query: 386 LGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPP 445
IE+ + + + + + L + L+ + S Y+HSA
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN---DHICYFLYQILRGLKYIHSAN--- 148
Query: 446 IYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHIS--TAPQGTPGYLDPQYHQYFHL 503
+ HRD+K SN+LL+ K+ DFGL+R+ + H T T Y P+
Sbjct: 149 VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 208
Query: 504 SDKS-DVYSFGVVLIEIIT 521
KS D++S G +L E+++
Sbjct: 209 YTKSIDIWSVGCILAEMLS 227
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 89/199 (44%), Gaps = 15/199 (7%)
Query: 332 LGTGAYGTVYAGKLH-NDDWVAIKRFR-YRDTDSIDQVMNEIKLLSSVSHPNLL----RL 385
+G GAYG V + + N VAIK+ + + + EIK+L + H N++ +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGINDII 92
Query: 386 LGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPP 445
IE+ + + + + + L + L+ + S Y+HSA
Sbjct: 93 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN---DHICYFLYQILRGLKYIHSAN--- 146
Query: 446 IYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHIS--TAPQGTPGYLDPQYHQYFHL 503
+ HRD+K SN+LL+ K+ DFGL+R+ + H T T Y P+
Sbjct: 147 VLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 206
Query: 504 SDKS-DVYSFGVVLIEIIT 521
KS D++S G +L E+++
Sbjct: 207 YTKSIDIWSVGCILAEMLS 225
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 98/228 (42%), Gaps = 33/228 (14%)
Query: 312 PFYPYKEIEKATSFFSEKHR----LGTGAYGTVYAG-KLHNDDWVAIKRFR--YRDTDSI 364
P + +E+ K E+++ +G+GAYG+V A VA+K+ ++
Sbjct: 6 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 65
Query: 365 DQVMNEIKLLSSVSHPNLLRLLGC-----CIEEGEPI-LVYEFM----PNGTLCQHLQRE 414
+ E++LL + H N++ LL +EE + LV M N CQ L +
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 125
Query: 415 RGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRL 474
L + Y+HSA I HRD+K SN+ ++ + K+ D GL+R
Sbjct: 126 HVQFLIYQILRGLK--------YIHSA---DIIHRDLKPSNLAVNEDCELKILDGGLARH 174
Query: 475 GMTESSHISTAPQGTPGYLDPQYH-QYFHLSDKSDVYSFGVVLIEIIT 521
E T T Y P+ + H + D++S G ++ E++T
Sbjct: 175 TDDE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 89/199 (44%), Gaps = 15/199 (7%)
Query: 332 LGTGAYGTVYAGKLH-NDDWVAIKRFR-YRDTDSIDQVMNEIKLLSSVSHPNLL----RL 385
+G GAYG V + + N VAIK+ + + + EIK+L + H N++ +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGINDII 92
Query: 386 LGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPP 445
IE+ + + + + + L + L+ + S Y+HSA
Sbjct: 93 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN---DHICYFLYQILRGLKYIHSAN--- 146
Query: 446 IYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHIS--TAPQGTPGYLDPQYHQYFHL 503
+ HRD+K SN+LL+ K+ DFGL+R+ + H T T Y P+
Sbjct: 147 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 206
Query: 504 SDKS-DVYSFGVVLIEIIT 521
KS D++S G +L E+++
Sbjct: 207 YTKSIDIWSVGCILAEMLS 225
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 87/199 (43%), Gaps = 15/199 (7%)
Query: 332 LGTGAYGTV-YAGKLHNDDWVAIKRFR-YRDTDSIDQVMNEIKLLSSVSHPNLL----RL 385
+G GAYG V A N VAIK+ + + + EIK+L H N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 386 LGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPP 445
IE+ + + + + + L + L+ + S Y+HSA
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN---DHICYFLYQILRGLKYIHSAN--- 148
Query: 446 IYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHIS--TAPQGTPGYLDPQYHQYFHL 503
+ HRD+K SN+LL+ K+ DFGL+R+ + H T T Y P+
Sbjct: 149 VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 208
Query: 504 SDKS-DVYSFGVVLIEIIT 521
KS D++S G +L E+++
Sbjct: 209 YTKSIDIWSVGCILAEMLS 227
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 83/200 (41%), Gaps = 16/200 (8%)
Query: 331 RLGTGAYGTVYA--GKLHNDDWVA-IKRFRYRDTDSIDQVMNEIKLLS-SVSHPNLLRLL 386
LG G + V K ++ A + R R D ++++EI +L + S P ++ L
Sbjct: 36 ELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLH 95
Query: 387 GCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPI 446
E IL+ E+ G + E + YLH I
Sbjct: 96 EVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQN---NI 152
Query: 447 YHRDIKSSNILLDYNY---RSKVADFGLSR-LGMT-ESSHISTAPQGTPGYLDPQYHQYF 501
H D+K NILL Y K+ DFG+SR +G E I GTP YL P+ Y
Sbjct: 153 VHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELREI----MGTPEYLAPEILNYD 208
Query: 502 HLSDKSDVYSFGVVLIEIIT 521
++ +D+++ G++ ++T
Sbjct: 209 PITTATDMWNIGIIAYMLLT 228
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 91/210 (43%), Gaps = 38/210 (18%)
Query: 332 LGTGAYGTVYAGKLHNDDW-VAIKRF---RYRDTDSI---DQVMNEIKLLSSVS--HPNL 382
LG+G +G+VY+G +D+ VAIK R D + +V E+ LL VS +
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 71
Query: 383 LRLLG---------CCIEEGEPIL-VYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXX 432
+RLL +E EP+ +++F+ T LQ E W
Sbjct: 72 IRLLDWFERPDSFVLILERPEPVQDLFDFI---TERGALQEELARSFFWQVLEA------ 122
Query: 433 XXXXYLHSAMNPPIYHRDIKSSNILLDYNY-RSKVADFGLSRLGMTESSHISTAPQGTPG 491
+ N + HRDIK NIL+D N K+ DFG G + T GT
Sbjct: 123 -----VRHCHNXGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDTVYTDFDGTRV 174
Query: 492 YLDPQYHQYFHLSDKS-DVYSFGVVLIEII 520
Y P++ +Y +S V+S G++L +++
Sbjct: 175 YSPPEWIRYHRYHGRSAAVWSLGILLYDMV 204
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 88/199 (44%), Gaps = 15/199 (7%)
Query: 332 LGTGAYGTVYAGKLH-NDDWVAIKRFR-YRDTDSIDQVMNEIKLLSSVSHPNLL----RL 385
+G GAYG V + + N VAIK+ + + + EIK+L H N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 386 LGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPP 445
IE+ + + + + + L + L+ + S Y+HSA
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN---DHICYFLYQILRGLKYIHSAN--- 144
Query: 446 IYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHIS--TAPQGTPGYLDPQYHQYFHL 503
+ HRD+K SN+LL+ K+ DFGL+R+ + H T T Y P+
Sbjct: 145 VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 204
Query: 504 SDKS-DVYSFGVVLIEIIT 521
KS D++S G +L E+++
Sbjct: 205 YTKSIDIWSVGCILAEMLS 223
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 74/188 (39%), Gaps = 10/188 (5%)
Query: 332 LGTGAYGTVYAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIE 391
+G G +G + + + ++ R + V EI S+ HPN++R +
Sbjct: 27 IGAGNFGVARLMRDKQANELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVILT 86
Query: 392 EGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDI 451
+V E+ G L + + Y H+ + HRD+
Sbjct: 87 PTHLAIVMEYASGGELFERICN--AGRFSEDEARFFFQQLISGVSYAHAMQ---VAHRDL 141
Query: 452 KSSNILLDYN--YRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLSDK-SD 508
K N LLD + R K+ADFG S+ + S S GTP Y+ P+ K +D
Sbjct: 142 KLENTLLDGSPAPRLKIADFGYSKASVLHSQPKSAV--GTPAYIAPEVLLKKEYDGKVAD 199
Query: 509 VYSFGVVL 516
V+S GV L
Sbjct: 200 VWSCGVTL 207
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 87/199 (43%), Gaps = 15/199 (7%)
Query: 332 LGTGAYGTV-YAGKLHNDDWVAIKRFR-YRDTDSIDQVMNEIKLLSSVSHPNLL----RL 385
+G GAYG V A N VAIK+ + + + EIK+L H N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 386 LGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPP 445
IE+ + + + + + L + L+ + S Y+HSA
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN---DHICYFLYQILRGLKYIHSAN--- 144
Query: 446 IYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHIS--TAPQGTPGYLDPQYHQYFHL 503
+ HRD+K SN+LL+ K+ DFGL+R+ + H T T Y P+
Sbjct: 145 VLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 204
Query: 504 SDKS-DVYSFGVVLIEIIT 521
KS D++S G +L E+++
Sbjct: 205 YTKSIDIWSVGCILAEMLS 223
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 88/199 (44%), Gaps = 15/199 (7%)
Query: 332 LGTGAYGTVYAGKLH-NDDWVAIKRFR-YRDTDSIDQVMNEIKLLSSVSHPNLL----RL 385
+G GAYG V + + N VAIK+ + + + EIK+L H N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 386 LGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPP 445
IE+ + + + + + L + L+ + S Y+HSA
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN---DHICYFLYQILRGLKYIHSAN--- 144
Query: 446 IYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHIS--TAPQGTPGYLDPQYHQYFHL 503
+ HRD+K SN+LL+ K+ DFGL+R+ + H T T Y P+
Sbjct: 145 VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 204
Query: 504 SDKS-DVYSFGVVLIEIIT 521
KS D++S G +L E+++
Sbjct: 205 YTKSIDIWSVGCILAEMLS 223
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 88/199 (44%), Gaps = 15/199 (7%)
Query: 332 LGTGAYGTVYAGKLH-NDDWVAIKRFR-YRDTDSIDQVMNEIKLLSSVSHPNLL----RL 385
+G GAYG V + + N VAIK+ + + + EIK+L H N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 386 LGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPP 445
IE+ + + + + + L + L+ + S Y+HSA
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN---DHICYFLYQILRGLKYIHSAN--- 144
Query: 446 IYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHIS--TAPQGTPGYLDPQYHQYFHL 503
+ HRD+K SN+LL+ K+ DFGL+R+ + H T T Y P+
Sbjct: 145 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 204
Query: 504 SDKS-DVYSFGVVLIEIIT 521
KS D++S G +L E+++
Sbjct: 205 YTKSIDIWSVGCILAEMLS 223
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 88/199 (44%), Gaps = 15/199 (7%)
Query: 332 LGTGAYGTVYAGKLH-NDDWVAIKRFR-YRDTDSIDQVMNEIKLLSSVSHPNLL----RL 385
+G GAYG V + + N VAIK+ + + + EIK+L H N++ +
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 110
Query: 386 LGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPP 445
IE+ + + + + + L + L+ + S Y+HSA
Sbjct: 111 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN---DHICYFLYQILRGLKYIHSAN--- 164
Query: 446 IYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHIS--TAPQGTPGYLDPQYHQYFHL 503
+ HRD+K SN+LL+ K+ DFGL+R+ + H T T Y P+
Sbjct: 165 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 224
Query: 504 SDKS-DVYSFGVVLIEIIT 521
KS D++S G +L E+++
Sbjct: 225 YTKSIDIWSVGCILAEMLS 243
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 87/199 (43%), Gaps = 15/199 (7%)
Query: 332 LGTGAYGTVYAGKLH-NDDWVAIKRFR-YRDTDSIDQVMNEIKLLSSVSHPNLL----RL 385
+G GAYG V + + N VAIK+ + + + EIK+L H N++ +
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 110
Query: 386 LGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPP 445
IE+ + + + + L + L+ + S Y+HSA
Sbjct: 111 RAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSN---DHICYFLYQILRGLKYIHSAN--- 164
Query: 446 IYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHIS--TAPQGTPGYLDPQYHQYFHL 503
+ HRD+K SN+LL+ K+ DFGL+R+ + H T T Y P+
Sbjct: 165 VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 224
Query: 504 SDKS-DVYSFGVVLIEIIT 521
KS D++S G +L E+++
Sbjct: 225 YTKSIDIWSVGCILAEMLS 243
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 87/199 (43%), Gaps = 15/199 (7%)
Query: 332 LGTGAYGTV-YAGKLHNDDWVAIKRFR-YRDTDSIDQVMNEIKLLSSVSHPNLL----RL 385
+G GAYG V A N VAIK+ + + + EIK+L H N++ +
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 95
Query: 386 LGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPP 445
IE+ + + + + + L + L+ + S Y+HSA
Sbjct: 96 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN---DHICYFLYQILRGLKYIHSAN--- 149
Query: 446 IYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHIS--TAPQGTPGYLDPQYHQYFHL 503
+ HRD+K SN+LL+ K+ DFGL+R+ + H T T Y P+
Sbjct: 150 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 209
Query: 504 SDKS-DVYSFGVVLIEIIT 521
KS D++S G +L E+++
Sbjct: 210 YTKSIDIWSVGCILAEMLS 228
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 87/199 (43%), Gaps = 15/199 (7%)
Query: 332 LGTGAYGTV-YAGKLHNDDWVAIKRFR-YRDTDSIDQVMNEIKLLSSVSHPNLL----RL 385
+G GAYG V A N VAIK+ + + + EIK+L H N++ +
Sbjct: 37 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 96
Query: 386 LGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPP 445
IE+ + + + + + L + L+ + S Y+HSA
Sbjct: 97 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN---DHICYFLYQILRGLKYIHSAN--- 150
Query: 446 IYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHIS--TAPQGTPGYLDPQYHQYFHL 503
+ HRD+K SN+LL+ K+ DFGL+R+ + H T T Y P+
Sbjct: 151 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 210
Query: 504 SDKS-DVYSFGVVLIEIIT 521
KS D++S G +L E+++
Sbjct: 211 YTKSIDIWSVGCILAEMLS 229
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 87/199 (43%), Gaps = 15/199 (7%)
Query: 332 LGTGAYGTV-YAGKLHNDDWVAIKRFR-YRDTDSIDQVMNEIKLLSSVSHPNLL----RL 385
+G GAYG V A N VAIK+ + + + EIK+L H N++ +
Sbjct: 28 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 87
Query: 386 LGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPP 445
IE+ + + + + + L + L+ + S Y+HSA
Sbjct: 88 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN---DHICYFLYQILRGLKYIHSAN--- 141
Query: 446 IYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHIS--TAPQGTPGYLDPQYHQYFHL 503
+ HRD+K SN+LL+ K+ DFGL+R+ + H T T Y P+
Sbjct: 142 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 201
Query: 504 SDKS-DVYSFGVVLIEIIT 521
KS D++S G +L E+++
Sbjct: 202 YTKSIDIWSVGCILAEMLS 220
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 87/199 (43%), Gaps = 15/199 (7%)
Query: 332 LGTGAYGTV-YAGKLHNDDWVAIKRFR-YRDTDSIDQVMNEIKLLSSVSHPNLL----RL 385
+G GAYG V A N VAIK+ + + + EIK+L H N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 386 LGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPP 445
IE+ + + + + + L + L+ + S Y+HSA
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN---DHICYFLYQILRGLKYIHSAN--- 148
Query: 446 IYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHIS--TAPQGTPGYLDPQYHQYFHL 503
+ HRD+K SN+LL+ K+ DFGL+R+ + H T T Y P+
Sbjct: 149 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 208
Query: 504 SDKS-DVYSFGVVLIEIIT 521
KS D++S G +L E+++
Sbjct: 209 YTKSIDIWSVGCILAEMLS 227
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 79/192 (41%), Gaps = 18/192 (9%)
Query: 332 LGTGAYGTVYAGKLHND----DWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLG 387
+G+G +G +L D + VA+K + R + V EI S+ HPN++R
Sbjct: 28 IGSGNFGV---ARLMRDKLTKELVAVK-YIERGAAIDENVQREIINHRSLRHPNIVRFKE 83
Query: 388 CCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIY 447
+ ++ E+ G L + + Y HS I
Sbjct: 84 VILTPTHLAIIMEYASGGELYERICN--AGRFSEDEARFFFQQLLSGVSYCHSMQ---IC 138
Query: 448 HRDIKSSNILLDYN--YRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLSD 505
HRD+K N LLD + R K+ DFG S+ + S ST GTP Y+ P+
Sbjct: 139 HRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTV--GTPAYIAPEVLLRQEYDG 196
Query: 506 K-SDVYSFGVVL 516
K +DV+S GV L
Sbjct: 197 KIADVWSCGVTL 208
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 88/199 (44%), Gaps = 15/199 (7%)
Query: 332 LGTGAYGTVYAGKLH-NDDWVAIKRFR-YRDTDSIDQVMNEIKLLSSVSHPNLL----RL 385
+G GAYG V + + N VAIK+ + + + EIK+L H N++ +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 92
Query: 386 LGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPP 445
IE+ + + + + + L + L+ + S Y+HSA
Sbjct: 93 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN---DHICYFLYQILRGLKYIHSAN--- 146
Query: 446 IYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHIS--TAPQGTPGYLDPQYHQYFHL 503
+ HRD+K SN+LL+ K+ DFGL+R+ + H T T Y P+
Sbjct: 147 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 206
Query: 504 SDKS-DVYSFGVVLIEIIT 521
KS D++S G +L E+++
Sbjct: 207 YTKSIDIWSVGCILAEMLS 225
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 79/190 (41%), Gaps = 41/190 (21%)
Query: 332 LGTGAYGTVYAGKLHN-DDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRL----- 385
LG G G V++ ++ D VAIK+ D S+ + EIK++ + H N++++
Sbjct: 19 LGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILG 78
Query: 386 ---------LGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXX 436
+G E +V E+M L L E+G L
Sbjct: 79 PSGSQLTDDVGSLTELNSVYIVQEYM-ETDLANVL--EQGPLLE-EHARLFMYQLLRGLK 134
Query: 437 YLHSAMNPPIYHRDIKSSNILLDY-NYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDP 495
Y+HSA + HRD+K +N+ ++ + K+ DFGL+R+ +DP
Sbjct: 135 YIHSA---NVLHRDLKPANLFINTEDLVLKIGDFGLARI------------------MDP 173
Query: 496 QYHQYFHLSD 505
Y HLS+
Sbjct: 174 HYSHKGHLSE 183
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 87/199 (43%), Gaps = 15/199 (7%)
Query: 332 LGTGAYGTV-YAGKLHNDDWVAIKRFR-YRDTDSIDQVMNEIKLLSSVSHPNLL----RL 385
+G GAYG V A N VAIK+ + + + EIK+L H N++ +
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 88
Query: 386 LGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPP 445
IE+ + + + + + L + L+ + S Y+HSA
Sbjct: 89 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN---DHICYFLYQILRGLKYIHSAN--- 142
Query: 446 IYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHIS--TAPQGTPGYLDPQYHQYFHL 503
+ HRD+K SN+LL+ K+ DFGL+R+ + H T T Y P+
Sbjct: 143 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 202
Query: 504 SDKS-DVYSFGVVLIEIIT 521
KS D++S G +L E+++
Sbjct: 203 YTKSIDIWSVGCILAEMLS 221
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 92/205 (44%), Gaps = 26/205 (12%)
Query: 332 LGTGAYGTVYAG-KLHNDDWVAIK---RFRYRDTDSIDQVMN---EIKLLSSVS----HP 380
LG G +GTV+AG +L + VAIK R R + + E+ LL V HP
Sbjct: 39 LGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHP 98
Query: 381 NLLRLLGCC-IEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLH 439
++RLL +EG +++ +P L ++ E+G L + H
Sbjct: 99 GVIRLLDWFETQEGFMLVLERPLPAQDLFDYIT-EKGP-LGEGPSRCFFGQVVAAIQHCH 156
Query: 440 SAMNPPIYHRDIKSSNILLDYNYR-SKVADFGLSRLGMTESSHISTAPQGTPGYLDPQY- 497
S + HRDIK NIL+D +K+ DFG L E T GT Y P++
Sbjct: 157 SRG---VVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEP---YTDFDGTRVYSPPEWI 210
Query: 498 --HQYFHLSDKSDVYSFGVVLIEII 520
HQY L + V+S G++L +++
Sbjct: 211 SRHQYHALP--ATVWSLGILLYDMV 233
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 91/210 (43%), Gaps = 38/210 (18%)
Query: 332 LGTGAYGTVYAGKLHNDDW-VAIKRF---RYRDTDSI---DQVMNEIKLLSSVS--HPNL 382
LG+G +G+VY+G +D+ VAIK R D + +V E+ LL VS +
Sbjct: 15 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 74
Query: 383 LRLLG---------CCIEEGEPIL-VYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXX 432
+RLL +E EP+ +++F+ T LQ E W
Sbjct: 75 IRLLDWFERPDSFVLILERPEPVQDLFDFI---TERGALQEELARSFFWQVLEA------ 125
Query: 433 XXXXYLHSAMNPPIYHRDIKSSNILLDYNY-RSKVADFGLSRLGMTESSHISTAPQGTPG 491
+ N + HRDIK NIL+D N K+ DFG G + T GT
Sbjct: 126 -----VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDTVYTDFDGTRV 177
Query: 492 YLDPQYHQYFHLSDKS-DVYSFGVVLIEII 520
Y P++ +Y +S V+S G++L +++
Sbjct: 178 YSPPEWIRYHRYHGRSAAVWSLGILLYDMV 207
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%), Gaps = 7/79 (8%)
Query: 448 HRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHI-STAPQGTPGYLDPQYHQYFH---- 502
HRDIK N+LLD N ++ADFG S L M + + S+ GTP Y+ P+ Q
Sbjct: 198 HRDIKPDNVLLDVNGHIRLADFG-SCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMG 256
Query: 503 -LSDKSDVYSFGVVLIEII 520
+ D +S GV + E++
Sbjct: 257 KYGPECDWWSLGVCMYEML 275
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 88/199 (44%), Gaps = 15/199 (7%)
Query: 332 LGTGAYGTVYAGKLH-NDDWVAIKRFR-YRDTDSIDQVMNEIKLLSSVSHPNLL----RL 385
+G GAYG V + + N VAIK+ + + + EIK+L H N++ +
Sbjct: 39 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 98
Query: 386 LGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPP 445
IE+ + + + + + L + L+ + S Y+HSA
Sbjct: 99 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN---DHICYFLYQILRGLKYIHSAN--- 152
Query: 446 IYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHIS--TAPQGTPGYLDPQYHQYFHL 503
+ HRD+K SN+LL+ K+ DFGL+R+ + H T T Y P+
Sbjct: 153 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 212
Query: 504 SDKS-DVYSFGVVLIEIIT 521
KS D++S G +L E+++
Sbjct: 213 YTKSIDIWSVGCILAEMLS 231
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 88/199 (44%), Gaps = 15/199 (7%)
Query: 332 LGTGAYGTVYAGKLH-NDDWVAIKRFR-YRDTDSIDQVMNEIKLLSSVSHPNLL----RL 385
+G GAYG V + + N VAIK+ + + + EIK+L H N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 386 LGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPP 445
IE+ + + + + + L + L+ + S Y+HSA
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN---DHICYFLYQILRGLKYIHSAN--- 144
Query: 446 IYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHIS--TAPQGTPGYLDPQYHQYFHL 503
+ HRD+K SN+LL+ K+ DFGL+R+ + H T T Y P+
Sbjct: 145 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 204
Query: 504 SDKS-DVYSFGVVLIEIIT 521
KS D++S G +L E+++
Sbjct: 205 YTKSIDIWSVGCILAEMLS 223
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 87/199 (43%), Gaps = 15/199 (7%)
Query: 332 LGTGAYGTV-YAGKLHNDDWVAIKRFR-YRDTDSIDQVMNEIKLLSSVSHPNLL----RL 385
+G GAYG V A N VAIK+ + + + EIK+L H N++ +
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 88
Query: 386 LGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPP 445
IE+ + + + + + L + L+ + S Y+HSA
Sbjct: 89 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN---DHICYFLYQILRGLKYIHSAN--- 142
Query: 446 IYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHIS--TAPQGTPGYLDPQYHQYFHL 503
+ HRD+K SN+LL+ K+ DFGL+R+ + H T T Y P+
Sbjct: 143 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 202
Query: 504 SDKS-DVYSFGVVLIEIIT 521
KS D++S G +L E+++
Sbjct: 203 YTKSIDIWSVGCILAEMLS 221
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 91/210 (43%), Gaps = 38/210 (18%)
Query: 332 LGTGAYGTVYAGKLHNDDW-VAIKRF---RYRDTDSI---DQVMNEIKLLSSVS--HPNL 382
LG+G +G+VY+G +D+ VAIK R D + +V E+ LL VS +
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 71
Query: 383 LRLLG---------CCIEEGEPIL-VYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXX 432
+RLL +E EP+ +++F+ T LQ E W
Sbjct: 72 IRLLDWFERPDSFVLILERPEPVQDLFDFI---TERGALQEELARSFFWQVLEA------ 122
Query: 433 XXXXYLHSAMNPPIYHRDIKSSNILLDYNY-RSKVADFGLSRLGMTESSHISTAPQGTPG 491
+ N + HRDIK NIL+D N K+ DFG G + T GT
Sbjct: 123 -----VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDTVYTDFDGTRV 174
Query: 492 YLDPQYHQYFHLSDKS-DVYSFGVVLIEII 520
Y P++ +Y +S V+S G++L +++
Sbjct: 175 YSPPEWIRYHRYHGRSAAVWSLGILLYDMV 204
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%), Gaps = 7/79 (8%)
Query: 448 HRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHI-STAPQGTPGYLDPQYHQYFH---- 502
HRDIK N+LLD N ++ADFG S L M + + S+ GTP Y+ P+ Q
Sbjct: 214 HRDIKPDNVLLDVNGHIRLADFG-SCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMG 272
Query: 503 -LSDKSDVYSFGVVLIEII 520
+ D +S GV + E++
Sbjct: 273 KYGPECDWWSLGVCMYEML 291
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 91/210 (43%), Gaps = 38/210 (18%)
Query: 332 LGTGAYGTVYAGKLHNDDW-VAIKRF---RYRDTDSI---DQVMNEIKLLSSVS--HPNL 382
LG+G +G+VY+G +D+ VAIK R D + +V E+ LL VS +
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 71
Query: 383 LRLLG---------CCIEEGEPIL-VYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXX 432
+RLL +E EP+ +++F+ T LQ E W
Sbjct: 72 IRLLDWFERPDSFVLILERPEPVQDLFDFI---TERGALQEELARSFFWQVLEA------ 122
Query: 433 XXXXYLHSAMNPPIYHRDIKSSNILLDYNY-RSKVADFGLSRLGMTESSHISTAPQGTPG 491
+ N + HRDIK NIL+D N K+ DFG G + T GT
Sbjct: 123 -----VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDTVYTDFDGTRV 174
Query: 492 YLDPQYHQYFHLSDKS-DVYSFGVVLIEII 520
Y P++ +Y +S V+S G++L +++
Sbjct: 175 YSPPEWIRYHRYHGRSAAVWSLGILLYDMV 204
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 448 HRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTP-GYLDPQYHQYFHLSDK 506
HRD+ + NILL N K+ DFGL+R ++ P ++ P+ S K
Sbjct: 222 HRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRLPLKWMAPESIFDKIYSTK 281
Query: 507 SDVYSFGVVLIEIIT 521
SDV+S+GV+L EI +
Sbjct: 282 SDVWSYGVLLWEIFS 296
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 48/93 (51%), Gaps = 9/93 (9%)
Query: 332 LGTGAYGTVYAG------KLHNDDWVAIKRFRYRDTDS-IDQVMNEIKLLSSVSHP-NLL 383
LG GA+G V K VA+K + T S +M E+K+L+ + H N++
Sbjct: 35 LGRGAFGKVVQASAFGIKKSPTCRTVAVKMLKEGATASEYKALMTELKILTHIGHHLNVV 94
Query: 384 RLLGCCIEEGEPILV-YEFMPNGTLCQHLQRER 415
LLG C ++G P++V E+ G L +L+ +R
Sbjct: 95 NLLGACTKQGGPLMVIVEYCKYGNLSNYLKSKR 127
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 43/80 (53%), Gaps = 7/80 (8%)
Query: 446 IYHRDIKSSNILLDYNYRSKVADFGLS---RLGMTESSHISTAPQGTPGYLDPQYHQYFH 502
I +RD+K N+LLD + +++D GL+ + G T++ + GTPG++ P+
Sbjct: 310 IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYA----GTPGFMAPELLLGEE 365
Query: 503 LSDKSDVYSFGVVLIEIITA 522
D ++ GV L E+I A
Sbjct: 366 YDFSVDYFALGVTLYEMIAA 385
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 85/197 (43%), Gaps = 12/197 (6%)
Query: 324 SFFSEKHRLGTGAYGTV-YAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNL 382
+++ ++ +G G++G V A + A K+ + +D+ EI+++ S+ HPN+
Sbjct: 9 QYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNI 68
Query: 383 LRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAM 442
+RL + + LV E G L + + +R Y H +
Sbjct: 69 IRLYETFEDNTDIYLVMELCTGGELFERVVHKR--VFRESDAARIMKDVLSAVAYCHK-L 125
Query: 443 NPPIYHRDIKSSNILLDYNYRS---KVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQ 499
N + HRD+K N L + K+ DFGL+ + + GTP Y+ PQ +
Sbjct: 126 N--VAHRDLKPENFLFLTDSPDSPLKLIDFGLA--ARFKPGKMMRTKVGTPYYVSPQVLE 181
Query: 500 YFHLSDKSDVYSFGVVL 516
+ + D +S GV++
Sbjct: 182 GLY-GPECDEWSAGVMM 197
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 85/197 (43%), Gaps = 12/197 (6%)
Query: 324 SFFSEKHRLGTGAYGTV-YAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNL 382
+++ ++ +G G++G V A + A K+ + +D+ EI+++ S+ HPN+
Sbjct: 26 QYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNI 85
Query: 383 LRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAM 442
+RL + + LV E G L + + +R Y H +
Sbjct: 86 IRLYETFEDNTDIYLVMELCTGGELFERVVHKR--VFRESDAARIMKDVLSAVAYCHK-L 142
Query: 443 NPPIYHRDIKSSNILLDYNYRS---KVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQ 499
N + HRD+K N L + K+ DFGL+ + + GTP Y+ PQ +
Sbjct: 143 N--VAHRDLKPENFLFLTDSPDSPLKLIDFGLA--ARFKPGKMMRTKVGTPYYVSPQVLE 198
Query: 500 YFHLSDKSDVYSFGVVL 516
+ + D +S GV++
Sbjct: 199 GLY-GPECDEWSAGVMM 214
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 87/199 (43%), Gaps = 15/199 (7%)
Query: 332 LGTGAYGTV-YAGKLHNDDWVAIKRFR-YRDTDSIDQVMNEIKLLSSVSHPNLL----RL 385
+G GAYG V A N VAIK+ + + + EIK+L H N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 386 LGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPP 445
IE+ + + + + + L + L+ + S Y+HSA
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN---DHICYFLYQILRGLKYIHSAN--- 148
Query: 446 IYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQ--GTPGYLDPQYHQYFHL 503
+ HRD+K SN+LL+ K+ DFGL+R+ + H + T Y P+
Sbjct: 149 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKG 208
Query: 504 SDKS-DVYSFGVVLIEIIT 521
KS D++S G +L E+++
Sbjct: 209 YTKSIDIWSVGCILAEMLS 227
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 87/199 (43%), Gaps = 15/199 (7%)
Query: 332 LGTGAYGTV-YAGKLHNDDWVAIKRFR-YRDTDSIDQVMNEIKLLSSVSHPNLL----RL 385
+G GAYG V A N VAIK+ + + + EIK+L H N++ +
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 95
Query: 386 LGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPP 445
IE+ + + + + + L + L+ + S Y+HSA
Sbjct: 96 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN---DHICYFLYQILRGLKYIHSAN--- 149
Query: 446 IYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQ--GTPGYLDPQYHQYFHL 503
+ HRD+K SN+LL+ K+ DFGL+R+ + H + T Y P+
Sbjct: 150 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKG 209
Query: 504 SDKS-DVYSFGVVLIEIIT 521
KS D++S G +L E+++
Sbjct: 210 YTKSIDIWSVGCILAEMLS 228
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 70/172 (40%), Gaps = 21/172 (12%)
Query: 318 EIEKATSFFSEKHRLGTGAYGTVYAGKLHNDDWVAIKRF--RYRDTDSID---------Q 366
E+ S ++ + + +G+YG V AG VAIKR D +++ +
Sbjct: 16 ELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKR 75
Query: 367 VMNEIKLLSSVSHPNLLRLLGCCIEEGEP-----ILVYEFMPNGTLCQHLQRERGSGLPW 421
V+ EI+LL+ HPN+L L + EP LV E M L Q + +R P
Sbjct: 76 VLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELM-RTDLAQVIHDQRIVISPQ 134
Query: 422 XXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSR 473
LH + HRD+ NILL N + DF L+R
Sbjct: 135 HIQYFMYHILLG----LHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAR 182
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 43/80 (53%), Gaps = 7/80 (8%)
Query: 446 IYHRDIKSSNILLDYNYRSKVADFGLS---RLGMTESSHISTAPQGTPGYLDPQYHQYFH 502
I +RD+K N+LLD + +++D GL+ + G T++ + GTPG++ P+
Sbjct: 310 IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYA----GTPGFMAPELLLGEE 365
Query: 503 LSDKSDVYSFGVVLIEIITA 522
D ++ GV L E+I A
Sbjct: 366 YDFSVDYFALGVTLYEMIAA 385
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 43/80 (53%), Gaps = 7/80 (8%)
Query: 446 IYHRDIKSSNILLDYNYRSKVADFGLS---RLGMTESSHISTAPQGTPGYLDPQYHQYFH 502
I +RD+K N+LLD + +++D GL+ + G T++ + GTPG++ P+
Sbjct: 310 IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYA----GTPGFMAPELLLGEE 365
Query: 503 LSDKSDVYSFGVVLIEIITA 522
D ++ GV L E+I A
Sbjct: 366 YDFSVDYFALGVTLYEMIAA 385
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 43/80 (53%), Gaps = 7/80 (8%)
Query: 446 IYHRDIKSSNILLDYNYRSKVADFGLS---RLGMTESSHISTAPQGTPGYLDPQYHQYFH 502
I +RD+K N+LLD + +++D GL+ + G T++ + GTPG++ P+
Sbjct: 310 IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYA----GTPGFMAPELLLGEE 365
Query: 503 LSDKSDVYSFGVVLIEIITA 522
D ++ GV L E+I A
Sbjct: 366 YDFSVDYFALGVTLYEMIAA 385
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 77/180 (42%), Gaps = 13/180 (7%)
Query: 315 PYKEIEKATSFFSEKHRLGTGAYGTV-YAGKLHNDDWVAIKRFRYRDTDSID-QVMNEIK 372
P + + +S F K LG GAYG V A + VAIK+ D + + EIK
Sbjct: 2 PKRIVYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIK 61
Query: 373 LLSSVSHPNLLRLLGC----CIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXX 428
+L H N++ + E + + + + L + + + S
Sbjct: 62 ILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSD---DHIQYFI 118
Query: 429 XXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQG 488
LH + + HRD+K SN+L++ N KV DFGL+R+ + ES+ ++ P G
Sbjct: 119 YQTLRAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARI-IDESAADNSEPTG 174
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 77/180 (42%), Gaps = 13/180 (7%)
Query: 315 PYKEIEKATSFFSEKHRLGTGAYGTV-YAGKLHNDDWVAIKRFRYRDTDSID-QVMNEIK 372
P + + +S F K LG GAYG V A + VAIK+ D + + EIK
Sbjct: 2 PKRIVYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIK 61
Query: 373 LLSSVSHPNLLRLLGC----CIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXX 428
+L H N++ + E + + + + L + + + S
Sbjct: 62 ILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSD---DHIQYFI 118
Query: 429 XXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQG 488
LH + + HRD+K SN+L++ N KV DFGL+R+ + ES+ ++ P G
Sbjct: 119 YQTLRAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARI-IDESAADNSEPTG 174
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 70/172 (40%), Gaps = 21/172 (12%)
Query: 318 EIEKATSFFSEKHRLGTGAYGTVYAGKLHNDDWVAIKRF--RYRDTDSID---------Q 366
E+ S ++ + + +G+YG V AG VAIKR D +++ +
Sbjct: 16 ELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKR 75
Query: 367 VMNEIKLLSSVSHPNLLRLLGCCIEEGEP-----ILVYEFMPNGTLCQHLQRERGSGLPW 421
V+ EI+LL+ HPN+L L + EP LV E M L Q + +R P
Sbjct: 76 VLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELM-RTDLAQVIHDQRIVISPQ 134
Query: 422 XXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSR 473
LH + HRD+ NILL N + DF L+R
Sbjct: 135 HIQYFMYHILLG----LHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAR 182
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 77/180 (42%), Gaps = 13/180 (7%)
Query: 315 PYKEIEKATSFFSEKHRLGTGAYGTV-YAGKLHNDDWVAIKRFRYRDTDSID-QVMNEIK 372
P + + +S F K LG GAYG V A + VAIK+ D + + EIK
Sbjct: 2 PKRIVYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIK 61
Query: 373 LLSSVSHPNLLRLLGC----CIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXX 428
+L H N++ + E + + + + L + + + S
Sbjct: 62 ILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSD---DHIQYFI 118
Query: 429 XXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQG 488
LH + + HRD+K SN+L++ N KV DFGL+R+ + ES+ ++ P G
Sbjct: 119 YQTLRAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARI-IDESAADNSEPTG 174
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 75/188 (39%), Gaps = 10/188 (5%)
Query: 332 LGTGAYGTVYAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIE 391
+G+G +G + + + ++ R + V EI S+ HPN++R +
Sbjct: 26 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVILT 85
Query: 392 EGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDI 451
+V E+ G L + + Y H+ + HRD+
Sbjct: 86 PTHLAIVMEYASGGELFERICN--AGRFSEDEARFFFQQLISGVSYCHAMQ---VCHRDL 140
Query: 452 KSSNILLDYN--YRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLSDK-SD 508
K N LLD + R K+ DFG S+ + S ST GTP Y+ P+ K +D
Sbjct: 141 KLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTV--GTPAYIAPEVLLKKEYDGKVAD 198
Query: 509 VYSFGVVL 516
V+S GV L
Sbjct: 199 VWSCGVTL 206
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 87/199 (43%), Gaps = 15/199 (7%)
Query: 332 LGTGAYGTV-YAGKLHNDDWVAIKRFR-YRDTDSIDQVMNEIKLLSSVSHPNLL----RL 385
+G GAYG V A N VAI++ + + + EIK+L H N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 386 LGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPP 445
IE+ + + + + + L + L+ + S Y+HSA
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN---DHICYFLYQILRGLKYIHSAN--- 148
Query: 446 IYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHIS--TAPQGTPGYLDPQYHQYFHL 503
+ HRD+K SN+LL+ K+ DFGL+R+ + H T T Y P+
Sbjct: 149 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 208
Query: 504 SDKS-DVYSFGVVLIEIIT 521
KS D++S G +L E+++
Sbjct: 209 YTKSIDIWSVGCILAEMLS 227
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 44/95 (46%), Gaps = 14/95 (14%)
Query: 437 YLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGL-SRLGMTESSHISTAPQ-------- 487
+LHS + HRD+K SNI + KV DFGL + + E P
Sbjct: 179 FLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHXG 235
Query: 488 --GTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEII 520
GT Y+ P+ + S K D++S G++L E++
Sbjct: 236 QVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL 270
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 332 LGTGAYGTVYAGKLHNDDW-VAIKRFRYRDTD-SIDQVMNEIKLLSSVSHPNLLRLLGCC 389
+G G +G V+ K DD AIKR R + + + ++VM E+K L+ + HP ++R
Sbjct: 14 MGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAW 73
Query: 390 IE 391
+E
Sbjct: 74 LE 75
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 88/205 (42%), Gaps = 31/205 (15%)
Query: 332 LGTGAYGTV-YAGKLHNDDWVAIKRFRYRDTDS---IDQVMNEIKLLSSVSHPNLLRLLG 387
+G+GAYG V A VAIK+ YR S + E++LL + H N++ LL
Sbjct: 33 VGSGAYGAVCSAVDGRTGAKVAIKKL-YRPFQSELFAKRAYRELRLLKHMRHENVIGLLD 91
Query: 388 CCIEE------GEPILVYEFMPN--GTLCQH--LQRERGSGLPWXXXXXXXXXXXXXXXY 437
+ + LV FM G L +H L +R L + Y
Sbjct: 92 VFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQFLVYQMLKGLR--------Y 143
Query: 438 LHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQY 497
+H+A I HRD+K N+ ++ + K+ DFGL+R +E T Y P+
Sbjct: 144 IHAA---GIIHRDLKPGNLAVNEDCELKILDFGLARQADSEMXGXVV----TRWYRAPEV 196
Query: 498 -HQYFHLSDKSDVYSFGVVLIEIIT 521
+ + D++S G ++ E+IT
Sbjct: 197 ILNWMRYTQTVDIWSVGCIMAEMIT 221
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 59/134 (44%), Gaps = 10/134 (7%)
Query: 365 DQVMNEIKLLSSVS-HPNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXX 423
+ + E+ +L VS HPN+++L LV++ M G L +L + L
Sbjct: 68 EATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEK--VTLSEKE 125
Query: 424 XXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLS-RLGMTESSHI 482
LH +N I HRD+K NILLD + K+ DFG S +L E
Sbjct: 126 TRKIMRALLEVICALHK-LN--IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLR- 181
Query: 483 STAPQGTPGYLDPQ 496
+ GTP YL P+
Sbjct: 182 --SVCGTPSYLAPE 193
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 74/188 (39%), Gaps = 10/188 (5%)
Query: 332 LGTGAYGTVYAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIE 391
+G+G +G + + + ++ R V EI S+ HPN++R +
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIAANVKREIINHRSLRHPNIVRFKEVILT 86
Query: 392 EGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDI 451
+V E+ G L + + Y H+ + HRD+
Sbjct: 87 PTHLAIVMEYASGGELFERICN--AGRFSEDEARFFFQQLISGVSYCHAMQ---VCHRDL 141
Query: 452 KSSNILLDYN--YRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLSDK-SD 508
K N LLD + R K+ DFG S+ + S ST GTP Y+ P+ K +D
Sbjct: 142 KLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTV--GTPAYIAPEVLLKKEYDGKVAD 199
Query: 509 VYSFGVVL 516
V+S GV L
Sbjct: 200 VWSCGVTL 207
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 58/134 (43%), Gaps = 10/134 (7%)
Query: 365 DQVMNEIKLLSSVS-HPNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXX 423
+ + E+ +L VS HPN+++L LV++ M G L +L + L
Sbjct: 68 EATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEK--VTLSEKE 125
Query: 424 XXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLS-RLGMTESSHI 482
LH +N I HRD+K NILLD + K+ DFG S +L E
Sbjct: 126 TRKIMRALLEVICALHK-LN--IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRE 182
Query: 483 STAPQGTPGYLDPQ 496
GTP YL P+
Sbjct: 183 VC---GTPSYLAPE 193
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 58/134 (43%), Gaps = 10/134 (7%)
Query: 365 DQVMNEIKLLSSVS-HPNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXX 423
+ + E+ +L VS HPN+++L LV++ M G L +L + L
Sbjct: 55 EATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEK--VTLSEKE 112
Query: 424 XXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLS-RLGMTESSHI 482
LH +N I HRD+K NILLD + K+ DFG S +L E
Sbjct: 113 TRKIMRALLEVICALHK-LN--IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRE 169
Query: 483 STAPQGTPGYLDPQ 496
GTP YL P+
Sbjct: 170 VC---GTPSYLAPE 180
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 86/212 (40%), Gaps = 34/212 (16%)
Query: 326 FSEKHRLGTGAYGTVYA------GKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSH 379
FS +G G +G VY GK++ + KR + + +++ +NE +LS VS
Sbjct: 190 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETL--ALNERIMLSLVS- 246
Query: 380 PNLLRLLGCCIEEGEPILV---YEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXX 436
G C P +V Y F L L G L +
Sbjct: 247 ------TGDC-----PFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF 295
Query: 437 Y-------LHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGT 489
Y L N + +RD+K +NILLD + +++D GL+ + H S GT
Sbjct: 296 YAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV---GT 352
Query: 490 PGYLDPQYHQYFHLSDKS-DVYSFGVVLIEII 520
GY+ P+ Q D S D +S G +L +++
Sbjct: 353 HGYMAPEVLQKGVAYDSSADWFSLGCMLFKLL 384
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 86/212 (40%), Gaps = 34/212 (16%)
Query: 326 FSEKHRLGTGAYGTVYA------GKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSH 379
FS +G G +G VY GK++ + KR + + +++ +NE +LS VS
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETL--ALNERIMLSLVS- 247
Query: 380 PNLLRLLGCCIEEGEPILV---YEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXX 436
G C P +V Y F L L G L +
Sbjct: 248 ------TGDC-----PFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF 296
Query: 437 Y-------LHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGT 489
Y L N + +RD+K +NILLD + +++D GL+ + H S GT
Sbjct: 297 YAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV---GT 353
Query: 490 PGYLDPQYHQYFHLSDKS-DVYSFGVVLIEII 520
GY+ P+ Q D S D +S G +L +++
Sbjct: 354 HGYMAPEVLQKGVAYDSSADWFSLGCMLFKLL 385
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 86/212 (40%), Gaps = 34/212 (16%)
Query: 326 FSEKHRLGTGAYGTVYA------GKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSH 379
FS +G G +G VY GK++ + KR + + +++ +NE +LS VS
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETL--ALNERIMLSLVS- 247
Query: 380 PNLLRLLGCCIEEGEPILV---YEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXX 436
G C P +V Y F L L G L +
Sbjct: 248 ------TGDC-----PFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF 296
Query: 437 Y-------LHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGT 489
Y L N + +RD+K +NILLD + +++D GL+ + H S GT
Sbjct: 297 YAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV---GT 353
Query: 490 PGYLDPQYHQYFHLSDKS-DVYSFGVVLIEII 520
GY+ P+ Q D S D +S G +L +++
Sbjct: 354 HGYMAPEVLQKGVAYDSSADWFSLGCMLFKLL 385
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 86/212 (40%), Gaps = 34/212 (16%)
Query: 326 FSEKHRLGTGAYGTVYA------GKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSH 379
FS +G G +G VY GK++ + KR + + +++ +NE +LS VS
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETL--ALNERIMLSLVS- 247
Query: 380 PNLLRLLGCCIEEGEPILV---YEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXX 436
G C P +V Y F L L G L +
Sbjct: 248 ------TGDC-----PFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF 296
Query: 437 Y-------LHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGT 489
Y L N + +RD+K +NILLD + +++D GL+ + H S GT
Sbjct: 297 YAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV---GT 353
Query: 490 PGYLDPQYHQYFHLSDKS-DVYSFGVVLIEII 520
GY+ P+ Q D S D +S G +L +++
Sbjct: 354 HGYMAPEVLQKGVAYDSSADWFSLGCMLFKLL 385
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 92/230 (40%), Gaps = 22/230 (9%)
Query: 299 KRLLCQAAGNSSVPFYPYKEI--EKATSFFSEKHRLGTGAYGTVYAGKLHNDDWVAIKRF 356
K+ + Q Y Y +I E + F HR A G V+ K N + K
Sbjct: 35 KKYVPQPVEVKQGSVYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKY- 93
Query: 357 RYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERG 416
V NEI +++ + HP L+ L ++ E +L+ EF+ G L + E
Sbjct: 94 ---------TVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAE-D 143
Query: 417 SGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRS--KVADFGL-SR 473
+ ++H I H DIK NI+ + S K+ DFGL ++
Sbjct: 144 YKMSEAEVINYMRQACEGLKHMHEH---SIVHLDIKPENIMCETKKASSVKIIDFGLATK 200
Query: 474 LGMTESSHISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITAL 523
L E ++TA T + P+ + +D+++ GV+ +++ L
Sbjct: 201 LNPDEIVKVTTA---TAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGL 247
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 72/152 (47%), Gaps = 12/152 (7%)
Query: 329 KHRLGTGAYGTV-YAGKLHNDDWVAIKRFRYRDTDSID--QVMNEIKLLSSVSHPNLLRL 385
+H +GTG+YG V A VAIK+ D ID +++ EI +L+ ++H +++++
Sbjct: 58 RHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKV 117
Query: 386 LGCCI----EEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSA 441
L I E+ + + V + + + + L Y+HSA
Sbjct: 118 LDIVIPKDVEKFDELYVVLEIADSDFKKLFRT--PVYLTELHIKTLLYNLLVGVKYVHSA 175
Query: 442 MNPPIYHRDIKSSNILLDYNYRSKVADFGLSR 473
I HRD+K +N L++ + KV DFGL+R
Sbjct: 176 G---ILHRDLKPANCLVNQDCSVKVCDFGLAR 204
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 70/163 (42%), Gaps = 18/163 (11%)
Query: 323 TSFFSEKHRLGTGAYGTVYAGKLHND-DWVAIKRFRYRDTDSIDQV--MNEIKLLSSVSH 379
S + + ++G G +G V+ + VA+K+ + + + EIK+L + H
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 76
Query: 380 PNLLRLLGCCIEEGEPI--------LVYEFMPNGTLCQH-LQRERGSGLPWXXXXXXXXX 430
N++ L+ C + P LV++F C+H L + L
Sbjct: 77 ENVVNLIEICRTKASPYNRCKGSIYLVFDF------CEHDLAGLLSNVLVKFTLSEIKRV 130
Query: 431 XXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSR 473
L+ I HRD+K++N+L+ + K+ADFGL+R
Sbjct: 131 MQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLAR 173
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 93/219 (42%), Gaps = 16/219 (7%)
Query: 313 FYPYKEIEK---ATSFFSEKHRLGTGAYGTVYA------GKLHNDDWVAIKRFRYRDTDS 363
F +K +E+ + F + LG G +G V A GK++ + KR + R ++
Sbjct: 170 FLQWKWLERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEA 229
Query: 364 IDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXX 423
+ +NE ++L V+ ++ L + LV M G L H+ +G P
Sbjct: 230 M--ALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEAR 287
Query: 424 XXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHIS 483
LH I +RD+K NILLD + +++D GL+ + + E I
Sbjct: 288 AVFYAAEICCGLEDLHRER---IVYRDLKPENILLDDHGHIRISDLGLA-VHVPEGQTIK 343
Query: 484 TAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITA 522
GT GY+ P+ + + D ++ G +L E+I
Sbjct: 344 -GRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAG 381
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 86/186 (46%), Gaps = 30/186 (16%)
Query: 326 FSEKHRLGTGAYGT-VYAGKLHNDDWVAIKR-----FRYRDTDSIDQVMNEIKLL-SSVS 378
F K LG GA GT VY G N D VA+KR F + D E++LL S
Sbjct: 26 FCPKDVLGHGAEGTIVYRGMFDNRD-VAVKRILPECFSFAD--------REVQLLRESDE 76
Query: 379 HPNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYL 438
HPN++R C ++ + + + TL ++++++ + L +L
Sbjct: 77 HPNVIRYF-CTEKDRQFQYIAIELCAATLQEYVEQKDFAHL-GLEPITLLQQTTSGLAHL 134
Query: 439 HSAMNPPIYHRDIKSSNILLDY-----NYRSKVADFGLSR---LGMTESSHISTAPQGTP 490
HS +N I HRD+K NIL+ ++ ++DFGL + +G S S P GT
Sbjct: 135 HS-LN--IVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVP-GTE 190
Query: 491 GYLDPQ 496
G++ P+
Sbjct: 191 GWIAPE 196
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 106/251 (42%), Gaps = 29/251 (11%)
Query: 332 LGTGAYGTV-YAGKLHNDDWVAIK-----RFRY---RDTDSIDQVMNEIKLLSSVSHPNL 382
LG+GA G V A + VAIK +F R+ D V EI++L ++HP +
Sbjct: 18 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 77
Query: 383 LRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAM 442
+++ E + +V E M G L + + L YLH
Sbjct: 78 IKIKNFFDAE-DYYIVLELMEGGELFDKVVGNKR--LKEATCKLYFYQMLLAVQYLHEN- 133
Query: 443 NPPIYHRDIKSSNILLDYNYRS---KVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQ 499
I HRD+K N+LL K+ DFG S++ + E+S + T GTP YL P+
Sbjct: 134 --GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI-LGETSLMRTLC-GTPTYLAPEVLV 189
Query: 500 YFHLSDKS---DVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDP 556
+ + D +S GV+L ++ FS ++V+L D+I G + I +
Sbjct: 190 SVGTAGYNRAVDCWSLGVILFICLSGYP--PFSEHRTQVSLK----DQITSGKYNFIPEV 243
Query: 557 YLEPHRDAWTL 567
+ E A L
Sbjct: 244 WAEVSEKALDL 254
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 106/251 (42%), Gaps = 29/251 (11%)
Query: 332 LGTGAYGTV-YAGKLHNDDWVAIK-----RFRY---RDTDSIDQVMNEIKLLSSVSHPNL 382
LG+GA G V A + VAIK +F R+ D V EI++L ++HP +
Sbjct: 24 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 83
Query: 383 LRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAM 442
+++ E + +V E M G L + + L YLH
Sbjct: 84 IKIKNFFDAE-DYYIVLELMEGGELFDKVVGNKR--LKEATCKLYFYQMLLAVQYLHEN- 139
Query: 443 NPPIYHRDIKSSNILLDYNYRS---KVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQ 499
I HRD+K N+LL K+ DFG S++ + E+S + T GTP YL P+
Sbjct: 140 --GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI-LGETSLMRTLC-GTPTYLAPEVLV 195
Query: 500 YFHLSDKS---DVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDP 556
+ + D +S GV+L ++ FS ++V+L D+I G + I +
Sbjct: 196 SVGTAGYNRAVDCWSLGVILFICLSGYP--PFSEHRTQVSLK----DQITSGKYNFIPEV 249
Query: 557 YLEPHRDAWTL 567
+ E A L
Sbjct: 250 WAEVSEKALDL 260
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 91/215 (42%), Gaps = 20/215 (9%)
Query: 359 RDTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSG 418
R+ D V EI++L ++HP ++++ E + +V E M G L + +
Sbjct: 193 READPALNVETEIEILKKLNHPCIIKIKNFFDAE-DYYIVLELMEGGELFDKVVGNKR-- 249
Query: 419 LPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRS---KVADFGLSRLG 475
L YLH I HRD+K N+LL K+ DFG S++
Sbjct: 250 LKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI- 305
Query: 476 MTESSHISTAPQGTPGYLDPQYHQYFHLSDKS---DVYSFGVVLIEIITALKVVDFSRPH 532
+ E+S + T GTP YL P+ + + D +S GV+L ++ FS
Sbjct: 306 LGETSLMRTLC-GTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYP--PFSEHR 362
Query: 533 SEVNLAALAIDRIGRGCVDEIIDPYLEPHRDAWTL 567
++V+L D+I G + I + + E A L
Sbjct: 363 TQVSLK----DQITSGKYNFIPEVWAEVSEKALDL 393
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 106/251 (42%), Gaps = 29/251 (11%)
Query: 332 LGTGAYGTV-YAGKLHNDDWVAIK-----RFRY---RDTDSIDQVMNEIKLLSSVSHPNL 382
LG+GA G V A + VAIK +F R+ D V EI++L ++HP +
Sbjct: 18 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 77
Query: 383 LRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAM 442
+++ E + +V E M G L + + L YLH
Sbjct: 78 IKIKNFFDAE-DYYIVLELMEGGELFDKVVGNKR--LKEATCKLYFYQMLLAVQYLHEN- 133
Query: 443 NPPIYHRDIKSSNILLDYNYRS---KVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQ 499
I HRD+K N+LL K+ DFG S++ + E+S + T GTP YL P+
Sbjct: 134 --GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI-LGETSLMRTLC-GTPTYLAPEVLV 189
Query: 500 YFHLSDKS---DVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDP 556
+ + D +S GV+L ++ FS ++V+L D+I G + I +
Sbjct: 190 SVGTAGYNRAVDCWSLGVILFICLSGYP--PFSEHRTQVSLK----DQITSGKYNFIPEV 243
Query: 557 YLEPHRDAWTL 567
+ E A L
Sbjct: 244 WAEVSEKALDL 254
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 106/251 (42%), Gaps = 29/251 (11%)
Query: 332 LGTGAYGTV-YAGKLHNDDWVAIK-----RFRY---RDTDSIDQVMNEIKLLSSVSHPNL 382
LG+GA G V A + VAIK +F R+ D V EI++L ++HP +
Sbjct: 17 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 76
Query: 383 LRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAM 442
+++ E + +V E M G L + + L YLH
Sbjct: 77 IKIKNFFDAE-DYYIVLELMEGGELFDKVVGNKR--LKEATCKLYFYQMLLAVQYLHEN- 132
Query: 443 NPPIYHRDIKSSNILLDYNYRS---KVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQ 499
I HRD+K N+LL K+ DFG S++ + E+S + T GTP YL P+
Sbjct: 133 --GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI-LGETSLMRTLC-GTPTYLAPEVLV 188
Query: 500 YFHLSDKS---DVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDP 556
+ + D +S GV+L ++ FS ++V+L D+I G + I +
Sbjct: 189 SVGTAGYNRAVDCWSLGVILFICLSGYP--PFSEHRTQVSLK----DQITSGKYNFIPEV 242
Query: 557 YLEPHRDAWTL 567
+ E A L
Sbjct: 243 WAEVSEKALDL 253
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 106/251 (42%), Gaps = 29/251 (11%)
Query: 332 LGTGAYGTV-YAGKLHNDDWVAIK-----RFRY---RDTDSIDQVMNEIKLLSSVSHPNL 382
LG+GA G V A + VAIK +F R+ D V EI++L ++HP +
Sbjct: 18 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 77
Query: 383 LRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAM 442
+++ E + +V E M G L + + L YLH
Sbjct: 78 IKIKNFFDAE-DYYIVLELMEGGELFDKVVGNKR--LKEATCKLYFYQMLLAVQYLHEN- 133
Query: 443 NPPIYHRDIKSSNILLDYNYRS---KVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQ 499
I HRD+K N+LL K+ DFG S++ + E+S + T GTP YL P+
Sbjct: 134 --GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI-LGETSLMRTLC-GTPTYLAPEVLV 189
Query: 500 YFHLSDKS---DVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDP 556
+ + D +S GV+L ++ FS ++V+L D+I G + I +
Sbjct: 190 SVGTAGYNRAVDCWSLGVILFICLSGYP--PFSEHRTQVSLK----DQITSGKYNFIPEV 243
Query: 557 YLEPHRDAWTL 567
+ E A L
Sbjct: 244 WAEVSEKALDL 254
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 70/163 (42%), Gaps = 18/163 (11%)
Query: 323 TSFFSEKHRLGTGAYGTVYAGKLHND-DWVAIKRFRYRDTDSIDQV--MNEIKLLSSVSH 379
S + + ++G G +G V+ + VA+K+ + + + EIK+L + H
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 76
Query: 380 PNLLRLLGCCIEEGEPI--------LVYEFMPNGTLCQH-LQRERGSGLPWXXXXXXXXX 430
N++ L+ C + P LV++F C+H L + L
Sbjct: 77 ENVVNLIEICRTKASPYNRCKASIYLVFDF------CEHDLAGLLSNVLVKFTLSEIKRV 130
Query: 431 XXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSR 473
L+ I HRD+K++N+L+ + K+ADFGL+R
Sbjct: 131 MQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLAR 173
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 448 HRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTP-GYLDPQYHQYFHLSDK 506
HRD+ + NILL K+ DFGL+R + ++ P ++ P+ + +
Sbjct: 216 HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQ 275
Query: 507 SDVYSFGVVLIEIIT 521
SDV+SFGV+L EI +
Sbjct: 276 SDVWSFGVLLWEIFS 290
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 51/99 (51%), Gaps = 9/99 (9%)
Query: 332 LGTGAYGTVYAGKLHNDD------WVAIKRFRYRDTDSIDQ-VMNEIKLLSSVSHP-NLL 383
LG GA+G V D VA+K + T S + +M+E+K+L + H N++
Sbjct: 30 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 89
Query: 384 RLLGCCIEEGEPILV-YEFMPNGTLCQHLQRERGSGLPW 421
LLG C + G P++V EF G L +L+ +R +P+
Sbjct: 90 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPY 128
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 448 HRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTP-GYLDPQYHQYFHLSDK 506
HRD+ + NILL K+ DFGL+R + ++ P ++ P+ + +
Sbjct: 221 HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQ 280
Query: 507 SDVYSFGVVLIEIIT 521
SDV+SFGV+L EI +
Sbjct: 281 SDVWSFGVLLWEIFS 295
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 51/99 (51%), Gaps = 9/99 (9%)
Query: 332 LGTGAYGTVYAGKLHNDD------WVAIKRFRYRDTDSIDQ-VMNEIKLLSSVSHP-NLL 383
LG GA+G V D VA+K + T S + +M+E+K+L + H N++
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 384 RLLGCCIEEGEPILV-YEFMPNGTLCQHLQRERGSGLPW 421
LLG C + G P++V EF G L +L+ +R +P+
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPY 133
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 448 HRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTP-GYLDPQYHQYFHLSDK 506
HRD+ + NILL K+ DFGL+R + ++ P ++ P+ + +
Sbjct: 223 HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQ 282
Query: 507 SDVYSFGVVLIEIIT 521
SDV+SFGV+L EI +
Sbjct: 283 SDVWSFGVLLWEIFS 297
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 51/99 (51%), Gaps = 9/99 (9%)
Query: 332 LGTGAYGTVYAGKLHNDD------WVAIKRFRYRDTDSIDQ-VMNEIKLLSSVSHP-NLL 383
LG GA+G V D VA+K + T S + +M+E+K+L + H N++
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 384 RLLGCCIEEGEPILV-YEFMPNGTLCQHLQRERGSGLPW 421
LLG C + G P++V EF G L +L+ +R +P+
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPY 135
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 448 HRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTP-GYLDPQYHQYFHLSDK 506
HRD+ + NILL K+ DFGL+R + ++ P ++ P+ + +
Sbjct: 214 HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQ 273
Query: 507 SDVYSFGVVLIEIIT 521
SDV+SFGV+L EI +
Sbjct: 274 SDVWSFGVLLWEIFS 288
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 51/99 (51%), Gaps = 9/99 (9%)
Query: 332 LGTGAYGTVYAGKLHNDD------WVAIKRFRYRDTDSIDQ-VMNEIKLLSSVSHP-NLL 383
LG GA+G V D VA+K + T S + +M+E+K+L + H N++
Sbjct: 28 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 87
Query: 384 RLLGCCIEEGEPILV-YEFMPNGTLCQHLQRERGSGLPW 421
LLG C + G P++V EF G L +L+ +R +P+
Sbjct: 88 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPY 126
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 70/163 (42%), Gaps = 18/163 (11%)
Query: 323 TSFFSEKHRLGTGAYGTVYAGKLHND-DWVAIKRFRYRDTDSIDQV--MNEIKLLSSVSH 379
S + + ++G G +G V+ + VA+K+ + + + EIK+L + H
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 76
Query: 380 PNLLRLLGCCIEEGEPI--------LVYEFMPNGTLCQH-LQRERGSGLPWXXXXXXXXX 430
N++ L+ C + P LV++F C+H L + L
Sbjct: 77 ENVVNLIEICRTKASPYNRCKGSIYLVFDF------CEHDLAGLLSNVLVKFTLSEIKRV 130
Query: 431 XXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSR 473
L+ I HRD+K++N+L+ + K+ADFGL+R
Sbjct: 131 MQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLAR 173
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 70/163 (42%), Gaps = 18/163 (11%)
Query: 323 TSFFSEKHRLGTGAYGTVYAGKLHND-DWVAIKRFRYRDTDSIDQV--MNEIKLLSSVSH 379
S + + ++G G +G V+ + VA+K+ + + + EIK+L + H
Sbjct: 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 75
Query: 380 PNLLRLLGCCIEEGEPI--------LVYEFMPNGTLCQH-LQRERGSGLPWXXXXXXXXX 430
N++ L+ C + P LV++F C+H L + L
Sbjct: 76 ENVVNLIEICRTKASPYNRCKGSIYLVFDF------CEHDLAGLLSNVLVKFTLSEIKRV 129
Query: 431 XXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSR 473
L+ I HRD+K++N+L+ + K+ADFGL+R
Sbjct: 130 MQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLAR 172
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 91/215 (42%), Gaps = 20/215 (9%)
Query: 359 RDTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSG 418
R+ D V EI++L ++HP ++++ E + +V E M G L + +
Sbjct: 179 READPALNVETEIEILKKLNHPCIIKIKNFFDAE-DYYIVLELMEGGELFDKVVGNKR-- 235
Query: 419 LPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRS---KVADFGLSRLG 475
L YLH I HRD+K N+LL K+ DFG S++
Sbjct: 236 LKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI- 291
Query: 476 MTESSHISTAPQGTPGYLDPQYHQYFHLSDKS---DVYSFGVVLIEIITALKVVDFSRPH 532
+ E+S + T GTP YL P+ + + D +S GV+L ++ FS
Sbjct: 292 LGETSLMRTLC-GTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYP--PFSEHR 348
Query: 533 SEVNLAALAIDRIGRGCVDEIIDPYLEPHRDAWTL 567
++V+L D+I G + I + + E A L
Sbjct: 349 TQVSLK----DQITSGKYNFIPEVWAEVSEKALDL 379
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 93/219 (42%), Gaps = 16/219 (7%)
Query: 313 FYPYKEIEK---ATSFFSEKHRLGTGAYGTVYA------GKLHNDDWVAIKRFRYRDTDS 363
F +K +E+ + F + LG G +G V A GK++ + KR + R ++
Sbjct: 170 FLQWKWLERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEA 229
Query: 364 IDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXX 423
+ +NE ++L V+ ++ L + LV M G L H+ +G P
Sbjct: 230 M--ALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEAR 287
Query: 424 XXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHIS 483
LH I +RD+K NILLD + +++D GL+ + + E I
Sbjct: 288 AVFYAAEICCGLEDLHRER---IVYRDLKPENILLDDHGHIRISDLGLA-VHVPEGQTIK 343
Query: 484 TAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITA 522
GT GY+ P+ + + D ++ G +L E+I
Sbjct: 344 -GRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAG 381
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 91/237 (38%), Gaps = 26/237 (10%)
Query: 331 RLGTGAYGTVYAGKLHNDDWVAIKRFRYRD--TDSIDQVMNEIKLLSSVSHPNLLRLLGC 388
+L G ++ G+ +D + +K + RD T E L SHPN+L +LG
Sbjct: 17 KLNENHSGELWKGRWQGND-IVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGA 75
Query: 389 C--IEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPI 446
C P L+ + P G+L L + +LH+ + P I
Sbjct: 76 CQSPPAPHPTLITHWXPYGSLYNVLHEGTNFVVDQSQAVKFALDXARGXAFLHT-LEPLI 134
Query: 447 YHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLSDK 506
+ S ++ +D + ++++ + S S P ++ P+ Q
Sbjct: 135 PRHALNSRSVXIDEDXTARIS------XADVKFSFQSPGRXYAPAWVAPEALQKKPEDTN 188
Query: 507 ---SDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLEP 560
+D +SF V+L E++T EV A L+ IG E + P + P
Sbjct: 189 RRSADXWSFAVLLWELVT-----------REVPFADLSNXEIGXKVALEGLRPTIPP 234
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 67/158 (42%), Gaps = 28/158 (17%)
Query: 331 RLGTGAYGTVY-AGKLHNDDWVAIKRFR--YRDTDSIDQVMNEIKLLSSVSHPNLLRLLG 387
+LG G YG VY A ++ VAIKR R + + + E+ LL + H N++ L
Sbjct: 41 KLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKS 100
Query: 388 CCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIY 447
L++E+ N L +++ + + +L+ +N +
Sbjct: 101 VIHHNHRLHLIFEYAEND-LKKYMDKNPDVSM------------RVIKSFLYQLINGVNF 147
Query: 448 -------HRDIKSSNILLDYNYRS-----KVADFGLSR 473
HRD+K N+LL + S K+ DFGL+R
Sbjct: 148 CHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLAR 185
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 86/210 (40%), Gaps = 36/210 (17%)
Query: 332 LGTGAYG-----------TVYAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHP 380
+G GA+G VYA KL + + IKR +DS E +++ + P
Sbjct: 77 IGRGAFGEVQLVRHKSTRKVYAMKLLSK-FEMIKR-----SDSA-FFWEERDIMAFANSP 129
Query: 381 NLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHS 440
+++L ++ +V E+MP G L + +P +HS
Sbjct: 130 WVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMS---NYDVPEKWARFYTAEVVLALDAIHS 186
Query: 441 AMNPPIYHRDIKSSNILLDYNYRSKVADFG----LSRLGMTESSHISTAPQGTPGYLDPQ 496
HRD+K N+LLD + K+ADFG +++ GM GTP Y+ P+
Sbjct: 187 M---GFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCD----TAVGTPDYISPE 239
Query: 497 YHQYF----HLSDKSDVYSFGVVLIEIITA 522
+ + + D +S GV L E++
Sbjct: 240 VLKSQGGDGYYGRECDWWSVGVFLYEMLVG 269
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 86/210 (40%), Gaps = 36/210 (17%)
Query: 332 LGTGAYG-----------TVYAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHP 380
+G GA+G VYA KL + + IKR +DS E +++ + P
Sbjct: 82 IGRGAFGEVQLVRHKSTRKVYAMKLLSK-FEMIKR-----SDSA-FFWEERDIMAFANSP 134
Query: 381 NLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHS 440
+++L ++ +V E+MP G L + +P +HS
Sbjct: 135 WVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMS---NYDVPEKWARFYTAEVVLALDAIHS 191
Query: 441 AMNPPIYHRDIKSSNILLDYNYRSKVADFG----LSRLGMTESSHISTAPQGTPGYLDPQ 496
HRD+K N+LLD + K+ADFG +++ GM GTP Y+ P+
Sbjct: 192 M---GFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCD----TAVGTPDYISPE 244
Query: 497 YHQYF----HLSDKSDVYSFGVVLIEIITA 522
+ + + D +S GV L E++
Sbjct: 245 VLKSQGGDGYYGRECDWWSVGVFLYEMLVG 274
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 86/210 (40%), Gaps = 36/210 (17%)
Query: 332 LGTGAYG-----------TVYAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHP 380
+G GA+G VYA KL + + IKR +DS E +++ + P
Sbjct: 82 IGRGAFGEVQLVRHKSTRKVYAMKLLSK-FEMIKR-----SDSA-FFWEERDIMAFANSP 134
Query: 381 NLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHS 440
+++L ++ +V E+MP G L + +P +HS
Sbjct: 135 WVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMS---NYDVPEKWARFYTAEVVLALDAIHS 191
Query: 441 AMNPPIYHRDIKSSNILLDYNYRSKVADFG----LSRLGMTESSHISTAPQGTPGYLDPQ 496
HRD+K N+LLD + K+ADFG +++ GM GTP Y+ P+
Sbjct: 192 M---GFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCD----TAVGTPDYISPE 244
Query: 497 YHQYF----HLSDKSDVYSFGVVLIEIITA 522
+ + + D +S GV L E++
Sbjct: 245 VLKSQGGDGYYGRECDWWSVGVFLYEMLVG 274
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 71/161 (44%), Gaps = 14/161 (8%)
Query: 321 KATSFFSEKHRLGTGAYGTVYAGKLHN-DDWVAIKRFRYRDTDSID--QVMNEIKLLSSV 377
K + KH +G G+YG VY N + VAIK+ D ID +++ EI +L+ +
Sbjct: 25 KVPDNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNRL 84
Query: 378 SHPNLLRLLGCCIEE-----GEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXX 432
++RL I E E +V E + + L + + L
Sbjct: 85 KSDYIIRLHDLIIPEDLLKFDELYIVLE-IADSDLKKLFK--TPIFLTEQHVKTILYNLL 141
Query: 433 XXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSR 473
++H + I HRD+K +N LL+ + K+ DFGL+R
Sbjct: 142 LGEKFIHES---GIIHRDLKPANCLLNQDCSVKICDFGLAR 179
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 81/213 (38%), Gaps = 33/213 (15%)
Query: 332 LGTGAYGTVY-AGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVS-HPNLLRLLGCC 389
L G + VY A + + A+KR + + ++ E+ + +S HPN+++
Sbjct: 36 LAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAA 95
Query: 390 --------IEEGEPILVYEFMPNGTLCQHLQRERGSG-LPWXXXXXXXXXXXXXXXYLHS 440
+ E +L+ E G L + L++ G L ++H
Sbjct: 96 SIGKEESDTGQAEFLLLTELC-KGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHR 154
Query: 441 AMNPPIYHRDIKSSNILLDYNYRSKVADFG--------------LSRLGMTESSHISTAP 486
PPI HRD+K N+LL K+ DFG R + E
Sbjct: 155 -QKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNT- 212
Query: 487 QGTPGYLDPQ---YHQYFHLSDKSDVYSFGVVL 516
TP Y P+ + F + +K D+++ G +L
Sbjct: 213 --TPMYRTPEIIDLYSNFPIGEKQDIWALGCIL 243
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 66/155 (42%), Gaps = 15/155 (9%)
Query: 326 FSEKHRLGTGAYGTVYAG--KLHNDDWVA--IKRFR-----YRDTDSIDQVMNEIKLLSS 376
+S LG+GA+G V+ K N + V IK+ + + + + +V EI +LS
Sbjct: 26 YSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSR 85
Query: 377 VSHPNLLRLLGCCIEEGEPILVYEFMPNGT-LCQHLQRERGSGLPWXXXXXXXXXXXXXX 435
V H N++++L +G LV E +G L + R P
Sbjct: 86 VEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGY 145
Query: 436 XYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFG 470
L I HRDIK NI++ ++ K+ DFG
Sbjct: 146 LRLKD-----IIHRDIKDENIVIAEDFTIKLIDFG 175
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 74/188 (39%), Gaps = 10/188 (5%)
Query: 332 LGTGAYGTVYAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIE 391
+G+G +G + + + ++ R + V EI S+ HPN++R +
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVILT 86
Query: 392 EGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDI 451
+V E+ G L + + Y H+ + HRD+
Sbjct: 87 PTHLAIVMEYASGGELFERICN--AGRFSEDEARFFFQQLISGVSYCHAMQ---VCHRDL 141
Query: 452 KSSNILLDYN--YRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLSDK-SD 508
K N LLD + R K+ FG S+ + S ST GTP Y+ P+ K +D
Sbjct: 142 KLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKSTV--GTPAYIAPEVLLKKEYDGKVAD 199
Query: 509 VYSFGVVL 516
V+S GV L
Sbjct: 200 VWSCGVTL 207
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 69/153 (45%), Gaps = 14/153 (9%)
Query: 329 KHRLGTGAYGTVYAGKLHNDDW-VAIKRFRYRDTDSID--QVMNEIKLLSSVSHPNLLRL 385
KH +G G+YG VY N + VAIK+ D ID +++ EI +L+ + ++RL
Sbjct: 31 KHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRL 90
Query: 386 LGCCIEE-----GEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHS 440
I + E +V E + + L + + L ++H
Sbjct: 91 YDLIIPDDLLKFDELYIVLE-IADSDLKKLFK--TPIFLTEEHIKTILYNLLLGENFIHE 147
Query: 441 AMNPPIYHRDIKSSNILLDYNYRSKVADFGLSR 473
+ I HRD+K +N LL+ + KV DFGL+R
Sbjct: 148 S---GIIHRDLKPANCLLNQDCSVKVCDFGLAR 177
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 94/216 (43%), Gaps = 21/216 (9%)
Query: 314 YPYKEIEKATSFFSEKHRLGTGAYGTVYAGKLHNDDW-VAIKRFRYRDTDSIDQVMNEIK 372
Y Y+E + + + RLG G++G V+ K + A+K+ R + E+
Sbjct: 65 YEYRE---EVHWMTHQPRLGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFR-----VEELV 116
Query: 373 LLSSVSHPNLLRLLGCCIEEGEPILVY-EFMPNGTLCQHLQRERGSGLPWXXXXXXXXXX 431
+ +S P ++ L G + EG + ++ E + G+L Q L ++ G LP
Sbjct: 117 ACAGLSSPRIVPLYGA-VREGPWVNIFMELLEGGSLGQ-LIKQMGC-LPEDRALYYLGQA 173
Query: 432 XXXXXYLHSAMNPPIYHRDIKSSNILLDYN-YRSKVADFG----LSRLGMTESSHISTAP 486
YLH+ I H D+K+ N+LL + R+ + DFG L G+ +S
Sbjct: 174 LEGLEYLHTRR---ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYI 230
Query: 487 QGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITA 522
GT ++ P+ K D++S +++ ++
Sbjct: 231 PGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 266
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 91/207 (43%), Gaps = 21/207 (10%)
Query: 332 LGTGAYGTVYAG-KLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVS-HPNLLRLLGCC 389
LG GA+ V L A+K + +V E+++L H N+L L+
Sbjct: 21 LGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFF 80
Query: 390 IEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHR 449
EE LV+E M G++ H+ + R +LH N I HR
Sbjct: 81 EEEDRFYLVFEKMRGGSILSHIHKRR--HFNELEASVVVQDVASALDFLH---NKGIAHR 135
Query: 450 DIKSSNILLDYNYR---SKVADFGL-SRLGMT-ESSHIST----APQGTPGYLDPQYHQY 500
D+K NIL ++ + K+ DFGL S + + + S IST P G+ Y+ P+ +
Sbjct: 136 DLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEA 195
Query: 501 F----HLSDKS-DVYSFGVVLIEIITA 522
F + DK D++S GV+L +++
Sbjct: 196 FSEEASIYDKRCDLWSLGVILYILLSG 222
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 41/86 (47%), Gaps = 4/86 (4%)
Query: 437 YLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQ 496
YLH + HRD+K N+ L+ + K+ DFGL+ + T GTP Y+ P+
Sbjct: 136 YLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTL-CGTPNYIAPE 191
Query: 497 YHQYFHLSDKSDVYSFGVVLIEIITA 522
S + DV+S G ++ ++
Sbjct: 192 VLSKKGHSFEVDVWSIGCIMYTLLVG 217
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 41/86 (47%), Gaps = 4/86 (4%)
Query: 437 YLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQ 496
YLH + HRD+K N+ L+ + K+ DFGL+ + T GTP Y+ P+
Sbjct: 132 YLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTL-CGTPNYIAPE 187
Query: 497 YHQYFHLSDKSDVYSFGVVLIEIITA 522
S + DV+S G ++ ++
Sbjct: 188 VLSKKGHSFEVDVWSIGCIMYTLLVG 213
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 41/86 (47%), Gaps = 4/86 (4%)
Query: 437 YLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQ 496
YLH + HRD+K N+ L+ + K+ DFGL+ + T GTP Y+ P+
Sbjct: 132 YLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTL-CGTPNYIAPE 187
Query: 497 YHQYFHLSDKSDVYSFGVVLIEIITA 522
S + DV+S G ++ ++
Sbjct: 188 VLSKKGHSFEVDVWSIGCIMYTLLVG 213
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 73/188 (38%), Gaps = 10/188 (5%)
Query: 332 LGTGAYGTVYAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIE 391
+G+G +G + + + ++ R + V EI S+ HPN++R +
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVILT 86
Query: 392 EGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDI 451
+V E+ G L + + Y H+ + HRD+
Sbjct: 87 PTHLAIVMEYASGGELFERICN--AGRFSEDEARFFFQQLISGVSYCHAMQ---VCHRDL 141
Query: 452 KSSNILLDYN--YRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLSDK-SD 508
K N LLD + R K+ FG S+ + S T GTP Y+ P+ K +D
Sbjct: 142 KLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKDTV--GTPAYIAPEVLLKKEYDGKVAD 199
Query: 509 VYSFGVVL 516
V+S GV L
Sbjct: 200 VWSCGVTL 207
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 94/216 (43%), Gaps = 21/216 (9%)
Query: 314 YPYKEIEKATSFFSEKHRLGTGAYGTVYAGKLHNDDW-VAIKRFRYRDTDSIDQVMNEIK 372
Y Y+E + + + R+G G++G V+ K + A+K+ R + E+
Sbjct: 51 YEYRE---EVHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFR-----VEELV 102
Query: 373 LLSSVSHPNLLRLLGCCIEEGEPILVY-EFMPNGTLCQHLQRERGSGLPWXXXXXXXXXX 431
+ +S P ++ L G + EG + ++ E + G+L Q L ++ G LP
Sbjct: 103 ACAGLSSPRIVPLYGA-VREGPWVNIFMELLEGGSLGQ-LIKQMGC-LPEDRALYYLGQA 159
Query: 432 XXXXXYLHSAMNPPIYHRDIKSSNILLDYN-YRSKVADFG----LSRLGMTESSHISTAP 486
YLH+ I H D+K+ N+LL + R+ + DFG L G+ +S
Sbjct: 160 LEGLEYLHTRR---ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYI 216
Query: 487 QGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITA 522
GT ++ P+ K D++S +++ ++
Sbjct: 217 PGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 252
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 5/77 (6%)
Query: 446 IYHRDIKSSNILLDYNY-RSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLS 504
+ HRDIK NIL+D N K+ DFG G + T GT Y P++ +Y
Sbjct: 178 VLHRDIKDENILIDLNRGELKLIDFG---SGALLKDTVYTDFDGTRVYSPPEWIRYHRYH 234
Query: 505 DKS-DVYSFGVVLIEII 520
+S V+S G++L +++
Sbjct: 235 GRSAAVWSLGILLYDMV 251
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 94/214 (43%), Gaps = 21/214 (9%)
Query: 314 YPYKEIEKATSFFSEKHRLGTGAYGTVYAGKLHNDDW-VAIKRFRYRDTDSIDQVMNEIK 372
Y Y+E + + + R+G G++G V+ K + A+K+ R + E+
Sbjct: 67 YEYRE---EVHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFR-----VEELV 118
Query: 373 LLSSVSHPNLLRLLGCCIEEGEPILVY-EFMPNGTLCQHLQRERGSGLPWXXXXXXXXXX 431
+ +S P ++ L G + EG + ++ E + G+L Q L ++ G LP
Sbjct: 119 ACAGLSSPRIVPLYGA-VREGPWVNIFMELLEGGSLGQ-LIKQMGC-LPEDRALYYLGQA 175
Query: 432 XXXXXYLHSAMNPPIYHRDIKSSNILLDYN-YRSKVADFG----LSRLGMTESSHISTAP 486
YLH+ I H D+K+ N+LL + R+ + DFG L G+ +S
Sbjct: 176 LEGLEYLHTRR---ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYI 232
Query: 487 QGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEII 520
GT ++ P+ K D++S +++ ++
Sbjct: 233 PGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHML 266
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 68/158 (43%), Gaps = 6/158 (3%)
Query: 365 DQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXX 424
+++ EI + S+ +P+++ G ++ +V E +L + +R + P
Sbjct: 87 EKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEP--EA 144
Query: 425 XXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHIST 484
YLH N + HRD+K N+ L+ + K+ DFGL+ + T
Sbjct: 145 RYFMRQTIQGVQYLH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKT 201
Query: 485 APQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITA 522
GTP Y+ P+ S + D++S G +L ++
Sbjct: 202 L-CGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVG 238
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 64/156 (41%), Gaps = 14/156 (8%)
Query: 373 LLSSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXX 432
LL HPN++ L + LV E M G L + R++
Sbjct: 74 LLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKF--FSEREASFVLHTIG 131
Query: 433 XXXXYLHSAMNPPIYHRDIKSSNILLDYNYRS------KVADFGLSRLGMTESSHISTAP 486
YLHS + HRD+K SNIL Y S ++ DFG ++ E+ + T P
Sbjct: 132 KTVEYLHSQ---GVVHRDLKPSNIL--YVDESGNPECLRICDFGFAKQLRAENGLLMT-P 185
Query: 487 QGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITA 522
T ++ P+ + + D++S G++L ++
Sbjct: 186 CYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAG 221
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 68/167 (40%), Gaps = 19/167 (11%)
Query: 367 VMNEIKLLSSVSHPNLLRLLGCCI--EEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXX 424
V EI+LL + H N+++L+ E+ + +V E+ G + + L P
Sbjct: 53 VKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCG-MQEMLDSVPEKRFPVCQA 111
Query: 425 XXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHIST 484
YLHS I H+DIK N+LL K+ S LG+ E+ H
Sbjct: 112 HGYFCQLIDGLEYLHSQG---IVHKDIKPGNLLLTTGGTLKI-----SALGVAEALHPFA 163
Query: 485 A------PQGTPGYLDPQYHQYFHLSD--KSDVYSFGVVLIEIITAL 523
A QG+P + P+ K D++S GV L I T L
Sbjct: 164 ADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGL 210
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 65/174 (37%), Gaps = 11/174 (6%)
Query: 326 FSEKHRLGTGAYGTVYAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRL 385
FSE + G VYA K+ N W +KR + E +L + + +L
Sbjct: 74 FSEVAVVKMKQTGQVYAMKIMNK-WDMLKR------GEVSCFREERDVLVNGDRRWITQL 126
Query: 386 LGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPP 445
+E LV E+ G L L + G +P +H
Sbjct: 127 HFAFQDENYLYLVMEYYVGGDLLTLLSK-FGERIPAEMARFYLAEIVMAIDSVHRL---G 182
Query: 446 IYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQ 499
HRDIK NILLD ++ADFG + + S GTP YL P+ Q
Sbjct: 183 YVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQ 236
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 64/156 (41%), Gaps = 14/156 (8%)
Query: 373 LLSSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXX 432
LL HPN++ L + LV E M G L + R++
Sbjct: 74 LLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKF--FSEREASFVLHTIG 131
Query: 433 XXXXYLHSAMNPPIYHRDIKSSNILLDYNYRS------KVADFGLSRLGMTESSHISTAP 486
YLHS + HRD+K SNIL Y S ++ DFG ++ E+ + T P
Sbjct: 132 KTVEYLHSQ---GVVHRDLKPSNIL--YVDESGNPECLRICDFGFAKQLRAENGLLMT-P 185
Query: 487 QGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITA 522
T ++ P+ + + D++S G++L ++
Sbjct: 186 CYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAG 221
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 92/227 (40%), Gaps = 20/227 (8%)
Query: 304 QAAGNSSVPFYPYKEIEKATSFFSEKHRLGTGAYGTVY--AGKLHNDDWVAIKRFRYRDT 361
Q G S+ ++ + T + K +G G+Y K N ++ A+K
Sbjct: 2 QTVGVHSIVQQLHRNSIQFTDGYEVKEDIGVGSYSVCKRCIHKATNMEF-AVKIIDKSKR 60
Query: 362 DSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPW 421
D +++ EI LL HPN++ L + +V E M G L + R++
Sbjct: 61 DPTEEI--EI-LLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKF--FSE 115
Query: 422 XXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRS------KVADFGLSRLG 475
YLH+ + HRD+K SNIL Y S ++ DFG ++
Sbjct: 116 REASAVLFTITKTVEYLHAQ---GVVHRDLKPSNIL--YVDESGNPESIRICDFGFAKQL 170
Query: 476 MTESSHISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITA 522
E+ + T P T ++ P+ + D++S GV+L ++T
Sbjct: 171 RAENGLLMT-PCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTG 216
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 4/86 (4%)
Query: 437 YLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQ 496
YLH + HRD+K N+ L+ + K+ DFGL+ + GTP Y+ P+
Sbjct: 156 YLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLAT-KVEYDGERKKVLCGTPNYIAPE 211
Query: 497 YHQYFHLSDKSDVYSFGVVLIEIITA 522
S + DV+S G ++ ++
Sbjct: 212 VLSKKGHSFEVDVWSIGCIMYTLLVG 237
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 4/86 (4%)
Query: 437 YLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQ 496
YLH + HRD+K N+ L+ + K+ DFGL+ + GTP Y+ P+
Sbjct: 154 YLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLAT-KVEYDGERKKVLCGTPNYIAPE 209
Query: 497 YHQYFHLSDKSDVYSFGVVLIEIITA 522
S + DV+S G ++ ++
Sbjct: 210 VLSKKGHSFEVDVWSIGCIMYTLLVG 235
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 38.1 bits (87), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 94/216 (43%), Gaps = 21/216 (9%)
Query: 314 YPYKEIEKATSFFSEKHRLGTGAYGTVYAGKLHNDDW-VAIKRFRYRDTDSIDQVMNEIK 372
Y Y+E + + + RLG G++G V+ + + A+K+ R + E+
Sbjct: 86 YEYRE---EVHWATHQLRLGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFRA-----EELM 137
Query: 373 LLSSVSHPNLLRLLGCCIEEGEPILVY-EFMPNGTLCQHLQRERGSGLPWXXXXXXXXXX 431
+ ++ P ++ L G + EG + ++ E + G+L Q L +E+G LP
Sbjct: 138 ACAGLTSPRIVPLYGA-VREGPWVNIFMELLEGGSLGQ-LVKEQGC-LPEDRALYYLGQA 194
Query: 432 XXXXXYLHSAMNPPIYHRDIKSSNILLDYN-YRSKVADFG----LSRLGMTESSHISTAP 486
YLHS I H D+K+ N+LL + + + DFG L G+ +S
Sbjct: 195 LEGLEYLHSRR---ILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYI 251
Query: 487 QGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITA 522
GT ++ P+ K DV+S +++ ++
Sbjct: 252 PGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNG 287
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 4/86 (4%)
Query: 437 YLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQ 496
YLH + HRD+K N+ L+ + K+ DFGL+ + GTP Y+ P+
Sbjct: 130 YLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLAT-KVEYDGERKKVLCGTPNYIAPE 185
Query: 497 YHQYFHLSDKSDVYSFGVVLIEIITA 522
S + DV+S G ++ ++
Sbjct: 186 VLSKKGHSFEVDVWSIGCIMYTLLVG 211
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 37.7 bits (86), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 43/87 (49%), Gaps = 9/87 (10%)
Query: 438 LHSAMNPPIYHRDIKSSNILLDYN--YRSKVADFGLS----RLGMTESSHISTAPQGTPG 491
LH N I HRDIK N L N + K+ DFGLS +L E ++T GTP
Sbjct: 181 LHYLHNQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKA-GTPY 239
Query: 492 YLDPQYHQYFHLS--DKSDVYSFGVVL 516
++ P+ + S K D +S GV+L
Sbjct: 240 FVAPEVLNTTNESYGPKCDAWSAGVLL 266
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 37.4 bits (85), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 86/202 (42%), Gaps = 24/202 (11%)
Query: 332 LGTGAYGTVY------AGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRL 385
LG G +G V+ + K + +V +K TD + V EI +L+ H N+L L
Sbjct: 13 LGRGEFGIVHRCVETSSKKTYMAKFVKVK-----GTDQV-LVKKEISILNIARHRNILHL 66
Query: 386 LGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPP 445
E ++++EF+ + + + L +LHS
Sbjct: 67 HESFESMEELVMIFEFISGLDIFERINTS-AFELNEREIVSYVHQVCEALQFLHS---HN 122
Query: 446 IYHRDIKSSNILLDYNYRS--KVADFGLSRLGMTESSH--ISTAPQGTPGYLDPQYHQYF 501
I H DI+ NI+ S K+ +FG +R + + TAP+ Y P+ HQ+
Sbjct: 123 IGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPE----YYAPEVHQHD 178
Query: 502 HLSDKSDVYSFGVVLIEIITAL 523
+S +D++S G ++ +++ +
Sbjct: 179 VVSTATDMWSLGTLVYVLLSGI 200
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 37.4 bits (85), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 90/207 (43%), Gaps = 21/207 (10%)
Query: 332 LGTGAYGTVYAG-KLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVS-HPNLLRLLGCC 389
LG GA+ V L A+K + +V E+++L H N+L L+
Sbjct: 21 LGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFF 80
Query: 390 IEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHR 449
EE LV+E M G++ H+ + R +LH N I HR
Sbjct: 81 EEEDRFYLVFEKMRGGSILSHIHKRR--HFNELEASVVVQDVASALDFLH---NKGIAHR 135
Query: 450 DIKSSNILLDYNYR---SKVADFGL-SRLGMT-ESSHIST----APQGTPGYLDPQYHQY 500
D+K NIL ++ + K+ DF L S + + + S IST P G+ Y+ P+ +
Sbjct: 136 DLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEA 195
Query: 501 F----HLSDKS-DVYSFGVVLIEIITA 522
F + DK D++S GV+L +++
Sbjct: 196 FSEEASIYDKRCDLWSLGVILYILLSG 222
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 37.0 bits (84), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 35/158 (22%), Positives = 67/158 (42%), Gaps = 6/158 (3%)
Query: 365 DQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXX 424
+++ EI + S+ +P+++ G ++ +V E +L + +R + P
Sbjct: 87 EKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEP--EA 144
Query: 425 XXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHIST 484
YLH N + HRD+K N+ L+ + K+ DFGL+ +
Sbjct: 145 RYFMRQTIQGVQYLH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLA-TKIEFDGERKK 200
Query: 485 APQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITA 522
GTP Y+ P+ S + D++S G +L ++
Sbjct: 201 XLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVG 238
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 37.0 bits (84), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 35/158 (22%), Positives = 67/158 (42%), Gaps = 6/158 (3%)
Query: 365 DQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXX 424
+++ EI + S+ +P+++ G ++ +V E +L + +R + P
Sbjct: 71 EKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEP--EA 128
Query: 425 XXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHIST 484
YLH N + HRD+K N+ L+ + K+ DFGL+ +
Sbjct: 129 RYFMRQTIQGVQYLH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLA-TKIEFDGERKK 184
Query: 485 APQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITA 522
GTP Y+ P+ S + D++S G +L ++
Sbjct: 185 DLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVG 222
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 36.6 bits (83), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 36/74 (48%)
Query: 448 HRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLSDKS 507
HRD+K NIL+ + + + DFG++ E GT Y P+ H + ++
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTVGTLYYXAPERFSESHATYRA 216
Query: 508 DVYSFGVVLIEIIT 521
D+Y+ VL E +T
Sbjct: 217 DIYALTCVLYECLT 230
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 36.6 bits (83), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 73/160 (45%), Gaps = 17/160 (10%)
Query: 314 YPYKEIEKATSFFSEKHRLGTGAYGTVYAGKLHNDDW-VAIKRFRYRDTDSIDQVMNEIK 372
Y Y+E + + + RLG G++G V+ + + A+K+ R + E+
Sbjct: 67 YEYRE---EVHWATHQLRLGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFRA-----EELM 118
Query: 373 LLSSVSHPNLLRLLGCCIEEGEPILVY-EFMPNGTLCQHLQRERGSGLPWXXXXXXXXXX 431
+ ++ P ++ L G + EG + ++ E + G+L Q L +E+G LP
Sbjct: 119 ACAGLTSPRIVPLYGA-VREGPWVNIFMELLEGGSLGQ-LVKEQGC-LPEDRALYYLGQA 175
Query: 432 XXXXXYLHSAMNPPIYHRDIKSSNILLDYN-YRSKVADFG 470
YLHS I H D+K+ N+LL + + + DFG
Sbjct: 176 LEGLEYLHSRR---ILHGDVKADNVLLSSDGSHAALCDFG 212
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 36.6 bits (83), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 35/158 (22%), Positives = 67/158 (42%), Gaps = 6/158 (3%)
Query: 365 DQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWXXX 424
+++ EI + S+ +P+++ G ++ +V E +L + +R + P
Sbjct: 87 EKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEP--EA 144
Query: 425 XXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHIST 484
YLH N + HRD+K N+ L+ + K+ DFGL+ +
Sbjct: 145 RYFMRQTIQGVQYLH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLA-TKIEFDGERKK 200
Query: 485 APQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITA 522
GTP Y+ P+ S + D++S G +L ++
Sbjct: 201 DLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVG 238
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 35.8 bits (81), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 87/218 (39%), Gaps = 22/218 (10%)
Query: 316 YKEIEKATSFFSEKHRLGTGAYGTVYAG---------KLHNDDWVAIKRFRYRDTDSIDQ 366
+ +I F+E LG G + ++ G +LH + V +K + +
Sbjct: 2 FHKIRNEDLIFNES--LGQGTFTKIFKGVRREVGDYGQLHETE-VLLKVLDKAHRNYSES 58
Query: 367 VMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERG-SGLPWXXXX 425
++S +SH +L+ G C+ E ILV EF+ G+L +L++ + + W
Sbjct: 59 FFEAASMMSKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEV 118
Query: 426 XXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVAD---FGLSRLGMTESSHI 482
+H + H ++ + NILL K + LS G++ +
Sbjct: 119 AKQLAAA-----MHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLP 173
Query: 483 STAPQGTPGYLDPQ-YHQYFHLSDKSDVYSFGVVLIEI 519
Q ++ P+ +L+ +D +SFG L EI
Sbjct: 174 KDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEI 211
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 35.8 bits (81), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 88/231 (38%), Gaps = 38/231 (16%)
Query: 318 EIEKATSFFS-EKHRLGTGAYGTVYAGKLHNDDWVAIKRFRYRDTDSIDQVM-NEIKLLS 375
E E+ F E ++G G YG VY K + + + I EI LL
Sbjct: 14 ERERVEDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACREIALLR 73
Query: 376 SVSHPNLLRLLGCCIEEGEP--ILVYEFMPNGTLCQHLQRERGSG-------LPWXXXXX 426
+ HPN++ L + + L++++ + L ++ R S LP
Sbjct: 74 ELKHPNVISLQKVFLSHADRKVWLLFDYAEHD-LWHIIKFHRASKANKKPVQLPRGMVKS 132
Query: 427 XXXXXXXXXXYLHSAMNPPIYHRDIKSSNILL----DYNYRSKVADFGLSRLGMTESSHI 482
YLH+ + HRD+K +NIL+ R K+AD G +RL
Sbjct: 133 LLYQILDGIHYLHANW---VLHRDLKPANILVMGEGPERGRVKIADMGFARL-------- 181
Query: 483 STAPQGTPGYLDPQYHQYF-----------HLSDKSDVYSFGVVLIEIITA 522
+P LDP ++ H + D+++ G + E++T+
Sbjct: 182 FNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTS 232
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 35.8 bits (81), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 88/197 (44%), Gaps = 21/197 (10%)
Query: 331 RLGTGAYGTVY-AGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSH-PNLLRLLGC 388
+LG G Y V+ A + N++ V +K + + I + EIK+L ++ PN++ L
Sbjct: 44 KLGRGKYSEVFEAINITNNEKVVVKILKPVKKNKIKR---EIKILENLRGGPNIITLADI 100
Query: 389 CIE--EGEPILVYEFMPNGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPI 446
+ P LV+E + N Q Q + + Y HS I
Sbjct: 101 VKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALD-----YCHSM---GI 152
Query: 447 YHRDIKSSNILLDYNYRS-KVADFGLSRLGMT-ESSHISTAPQGTPGYLDPQYHQYFHLS 504
HRD+K N+++D+ +R ++ D+GL+ + ++ A + G P+ + +
Sbjct: 153 MHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG---PELLVDYQMY 209
Query: 505 DKS-DVYSFGVVLIEII 520
D S D++S G +L +I
Sbjct: 210 DYSLDMWSLGCMLASMI 226
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 35.4 bits (80), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 90/227 (39%), Gaps = 20/227 (8%)
Query: 304 QAAGNSSVPFYPYKEIEKATSFFSEKHRLGTGAYGTVY--AGKLHNDDWVAIKRFRYRDT 361
Q G S+ ++ + T + K +G G+Y K N ++ A+K
Sbjct: 2 QTVGVHSIVQQLHRNSIQFTDGYEVKEDIGVGSYSVCKRCIHKATNXEF-AVKIIDKSKR 60
Query: 362 DSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPW 421
D +++ EI LL HPN++ L + +V E G L + R++
Sbjct: 61 DPTEEI--EI-LLRYGQHPNIITLKDVYDDGKYVYVVTELXKGGELLDKILRQKF--FSE 115
Query: 422 XXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRS------KVADFGLSRLG 475
YLH+ + HRD+K SNIL Y S ++ DFG ++
Sbjct: 116 REASAVLFTITKTVEYLHAQ---GVVHRDLKPSNIL--YVDESGNPESIRICDFGFAKQL 170
Query: 476 MTESSHISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITA 522
E+ + T P T ++ P+ + D++S GV+L +T
Sbjct: 171 RAENGLLXT-PCYTANFVAPEVLERQGYDAACDIWSLGVLLYTXLTG 216
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.135 0.419
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,689,444
Number of Sequences: 62578
Number of extensions: 792841
Number of successful extensions: 3969
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 782
Number of HSP's successfully gapped in prelim test: 260
Number of HSP's that attempted gapping in prelim test: 1819
Number of HSP's gapped (non-prelim): 1243
length of query: 692
length of database: 14,973,337
effective HSP length: 106
effective length of query: 586
effective length of database: 8,340,069
effective search space: 4887280434
effective search space used: 4887280434
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)